Query 000997
Match_columns 1194
No_of_seqs 887 out of 5687
Neff 7.9
Searched_HMMs 46136
Date Thu Mar 28 12:54:36 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/000997.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/000997hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0065 Pleiotropic drug resis 100.0 2E-214 3E-219 1945.7 77.6 1120 19-1193 12-1155(1391)
2 PLN03140 ABC transporter G fam 100.0 5E-194 1E-198 1895.4 116.9 1186 6-1191 24-1242(1470)
3 TIGR00956 3a01205 Pleiotropic 100.0 2E-154 5E-159 1528.4 109.1 1072 76-1193 2-1129(1394)
4 KOG0061 Transporter, ABC super 100.0 1.6E-81 3.6E-86 769.7 55.5 583 97-758 21-608 (613)
5 TIGR00955 3a01204 The Eye Pigm 100.0 1.7E-80 3.7E-85 770.6 57.4 569 145-757 35-612 (617)
6 PLN03211 ABC transporter G-25; 100.0 1.7E-79 3.7E-84 760.0 61.8 608 96-758 34-658 (659)
7 PLN03140 ABC transporter G fam 100.0 5.3E-78 1.2E-82 795.2 61.4 597 95-759 861-1467(1470)
8 KOG0055 Multidrug/pheromone ex 100.0 3.4E-73 7.3E-78 701.5 57.9 784 143-1054 361-1208(1228)
9 KOG0065 Pleiotropic drug resis 100.0 1.9E-75 4.1E-80 718.8 35.5 559 146-757 802-1382(1391)
10 TIGR00956 3a01205 Pleiotropic 100.0 3.9E-72 8.5E-77 743.7 60.7 559 147-757 775-1389(1394)
11 KOG0054 Multidrug resistance-a 100.0 1.8E-72 4E-77 712.2 53.9 756 147-1055 533-1358(1381)
12 TIGR01257 rim_protein retinal- 100.0 1.9E-70 4.1E-75 722.1 72.6 209 842-1066 1952-2162(2272)
13 PLN03130 ABC transporter C fam 100.0 2.2E-67 4.7E-72 704.9 61.1 211 816-1055 1237-1457(1622)
14 PLN03232 ABC transporter C fam 100.0 9.6E-67 2.1E-71 699.5 59.9 210 816-1054 1234-1453(1495)
15 COG1123 ATPase components of v 100.0 8.8E-67 1.9E-71 606.7 50.3 474 148-1054 22-514 (539)
16 TIGR00957 MRP_assoc_pro multi 100.0 9.5E-65 2.1E-69 681.2 62.2 211 816-1055 1284-1504(1522)
17 PTZ00265 multidrug resistance 100.0 1.8E-64 3.9E-69 670.6 62.2 216 816-1054 1165-1447(1466)
18 PRK13549 xylose transporter AT 100.0 6.3E-65 1.4E-69 620.7 49.0 461 148-1057 18-492 (506)
19 PRK10261 glutathione transport 100.0 2.1E-64 4.5E-69 627.4 52.3 488 148-1055 29-549 (623)
20 PRK10762 D-ribose transporter 100.0 1.2E-64 2.6E-69 617.5 49.1 450 148-1056 17-481 (501)
21 PRK09700 D-allose transporter 100.0 1.5E-64 3.2E-69 618.6 48.9 458 148-1054 18-493 (510)
22 PRK15134 microcin C ABC transp 100.0 5.9E-64 1.3E-68 615.4 50.5 464 148-1054 22-510 (529)
23 PRK15439 autoinducer 2 ABC tra 100.0 8.6E-64 1.9E-68 610.3 48.8 453 149-1056 25-489 (510)
24 TIGR02633 xylG D-xylose ABC tr 100.0 2.4E-63 5.1E-68 606.9 49.4 460 148-1055 14-488 (500)
25 TIGR03269 met_CoM_red_A2 methy 100.0 2.5E-63 5.4E-68 609.1 49.8 445 148-1054 13-512 (520)
26 PRK11288 araG L-arabinose tran 100.0 2.5E-63 5.5E-68 605.9 48.4 452 148-1057 17-483 (501)
27 PTZ00243 ABC transporter; Prov 100.0 1.4E-62 2.9E-67 658.1 59.7 210 816-1054 1308-1528(1560)
28 TIGR01271 CFTR_protein cystic 100.0 4.5E-62 9.7E-67 653.3 63.7 209 816-1054 1217-1435(1490)
29 PRK10982 galactose/methyl gala 100.0 3E-62 6.4E-67 595.5 48.8 450 148-1055 11-476 (491)
30 KOG0061 Transporter, ABC super 100.0 1.2E-62 2.5E-67 603.4 33.1 358 813-1192 22-388 (613)
31 PRK10938 putative molybdenum t 100.0 5.9E-61 1.3E-65 584.4 43.3 446 149-1051 17-484 (490)
32 COG4172 ABC-type uncharacteriz 100.0 3.1E-60 6.8E-65 516.8 43.8 471 146-1054 21-511 (534)
33 PRK11819 putative ABC transpor 100.0 1.3E-58 2.8E-63 570.0 51.7 190 840-1053 335-527 (556)
34 PRK15064 ABC transporter ATP-b 100.0 2.1E-58 4.6E-63 566.5 50.6 198 816-1054 319-520 (530)
35 TIGR03719 ABC_ABC_ChvD ATP-bin 100.0 9.2E-58 2E-62 562.5 54.0 189 841-1053 334-525 (552)
36 PRK10636 putative ABC transpor 100.0 4.2E-56 9E-61 553.2 49.8 186 840-1054 323-512 (638)
37 PRK13409 putative ATPase RIL; 100.0 1.2E-56 2.6E-61 549.6 41.5 197 844-1068 354-554 (590)
38 PRK11147 ABC transporter ATPas 100.0 1.4E-55 2.9E-60 550.3 47.8 191 840-1054 330-523 (635)
39 PLN03211 ABC transporter G-25; 100.0 1.4E-56 3E-61 555.7 37.8 368 813-1192 36-437 (659)
40 TIGR00955 3a01204 The Eye Pigm 100.0 1E-56 2.2E-61 558.1 35.2 346 840-1192 36-391 (617)
41 COG1129 MglA ABC-type sugar tr 100.0 6.7E-55 1.5E-59 504.5 44.5 452 147-1054 20-485 (500)
42 PLN03073 ABC transporter F fam 100.0 3E-52 6.4E-57 519.2 54.2 200 816-1054 508-709 (718)
43 COG0488 Uup ATPase components 100.0 4.7E-52 1E-56 495.1 44.1 219 147-395 15-238 (530)
44 COG3845 ABC-type uncharacteriz 100.0 3.2E-50 7E-55 454.3 42.1 458 147-1056 16-489 (501)
45 COG1126 GlnQ ABC-type polar am 100.0 5.4E-46 1.2E-50 378.7 20.6 211 833-1054 6-220 (240)
46 KOG0927 Predicted transporter 100.0 3.4E-43 7.3E-48 397.6 31.1 203 814-1054 387-591 (614)
47 COG1126 GlnQ ABC-type polar am 100.0 2.7E-43 5.8E-48 359.1 20.4 221 147-418 14-238 (240)
48 COG1127 Ttg2A ABC-type transpo 100.0 6.4E-43 1.4E-47 361.8 20.0 224 836-1070 15-250 (263)
49 COG1135 AbcC ABC-type metal io 100.0 6.9E-43 1.5E-47 373.6 19.3 203 841-1055 18-227 (339)
50 COG1131 CcmA ABC-type multidru 100.0 3.7E-42 8E-47 387.8 24.0 205 838-1054 13-221 (293)
51 COG1120 FepC ABC-type cobalami 100.0 1.6E-42 3.5E-47 373.3 19.8 209 839-1056 12-225 (258)
52 COG1116 TauB ABC-type nitrate/ 100.0 2.6E-42 5.5E-47 363.8 20.3 193 840-1045 14-207 (248)
53 COG1121 ZnuC ABC-type Mn/Zn tr 100.0 1E-41 2.2E-46 364.9 23.8 218 816-1056 4-224 (254)
54 COG3638 ABC-type phosphate/pho 100.0 5.4E-42 1.2E-46 354.0 17.5 210 840-1058 15-236 (258)
55 COG1135 AbcC ABC-type metal io 100.0 1.6E-41 3.4E-46 363.3 21.6 224 146-420 17-246 (339)
56 COG1125 OpuBA ABC-type proline 100.0 7.8E-42 1.7E-46 354.3 18.1 205 838-1054 10-220 (309)
57 COG1125 OpuBA ABC-type proline 100.0 1.5E-41 3.3E-46 352.1 19.9 210 147-397 13-225 (309)
58 COG1136 SalX ABC-type antimicr 100.0 2.8E-41 6E-46 356.8 22.0 192 842-1045 18-218 (226)
59 COG1118 CysA ABC-type sulfate/ 100.0 1.9E-41 4E-46 361.5 18.3 207 839-1055 12-223 (345)
60 COG4555 NatA ABC-type Na+ tran 100.0 1.5E-41 3.2E-46 340.7 14.9 201 843-1055 16-218 (245)
61 COG3839 MalK ABC-type sugar tr 100.0 5E-41 1.1E-45 375.3 20.6 217 150-417 18-235 (338)
62 COG1131 CcmA ABC-type multidru 100.0 1.1E-40 2.4E-45 375.9 23.1 212 147-401 17-230 (293)
63 COG3839 MalK ABC-type sugar tr 100.0 8.6E-41 1.9E-45 373.4 20.4 205 839-1055 13-219 (338)
64 COG1118 CysA ABC-type sulfate/ 100.0 9.2E-41 2E-45 356.2 19.5 223 147-418 14-240 (345)
65 COG1120 FepC ABC-type cobalami 100.0 1.6E-40 3.5E-45 357.8 21.2 211 147-396 14-227 (258)
66 COG3842 PotA ABC-type spermidi 100.0 7.3E-41 1.6E-45 375.9 19.2 223 147-419 17-240 (352)
67 COG1121 ZnuC ABC-type Mn/Zn tr 100.0 6.5E-40 1.4E-44 351.0 24.1 206 149-396 18-226 (254)
68 COG3842 PotA ABC-type spermidi 100.0 1.4E-40 3E-45 373.7 18.6 209 836-1055 12-222 (352)
69 COG1127 Ttg2A ABC-type transpo 100.0 8E-40 1.7E-44 338.8 21.7 211 146-397 19-235 (263)
70 COG1117 PstB ABC-type phosphat 100.0 3.2E-40 6.9E-45 334.5 17.7 207 840-1055 18-233 (253)
71 COG2884 FtsE Predicted ATPase 100.0 7.2E-40 1.6E-44 326.1 19.3 199 842-1053 15-220 (223)
72 COG1116 TauB ABC-type nitrate/ 100.0 8.6E-40 1.9E-44 344.7 20.5 192 148-384 16-207 (248)
73 COG4555 NatA ABC-type Na+ tran 100.0 3.4E-40 7.4E-45 330.9 16.2 207 147-397 14-222 (245)
74 COG1117 PstB ABC-type phosphat 100.0 5.5E-40 1.2E-44 332.8 16.9 221 148-416 20-248 (253)
75 PRK13537 nodulation ABC transp 100.0 4.6E-39 9.9E-44 366.3 26.5 203 840-1054 18-222 (306)
76 COG3638 ABC-type phosphate/pho 100.0 1.7E-39 3.7E-44 335.5 20.6 216 147-397 16-237 (258)
77 TIGR02314 ABC_MetN D-methionin 100.0 1.9E-38 4.2E-43 363.8 26.4 201 842-1054 18-225 (343)
78 COG1136 SalX ABC-type antimicr 100.0 1.2E-38 2.5E-43 336.9 22.0 196 147-386 17-220 (226)
79 COG1137 YhbG ABC-type (unclass 100.0 2.3E-39 5.1E-44 324.5 14.8 213 833-1055 8-224 (243)
80 cd03261 ABC_Org_Solvent_Resist 100.0 2.3E-38 5.1E-43 348.9 24.1 203 841-1054 12-221 (235)
81 TIGR02314 ABC_MetN D-methionin 100.0 4.1E-38 8.8E-43 361.1 26.5 206 148-396 18-229 (343)
82 PRK11650 ugpC glycerol-3-phosp 100.0 1.8E-38 4E-43 367.1 23.8 203 841-1055 16-220 (356)
83 TIGR03265 PhnT2 putative 2-ami 100.0 2.2E-38 4.7E-43 366.1 24.2 204 840-1055 15-220 (353)
84 PRK11432 fbpC ferric transport 100.0 3E-38 6.4E-43 364.3 24.0 204 840-1055 17-222 (351)
85 TIGR01188 drrA daunorubicin re 100.0 3.6E-38 7.8E-43 359.4 24.3 203 840-1054 4-208 (302)
86 PRK13536 nodulation factor exp 100.0 4.2E-38 9.2E-43 361.9 25.0 204 839-1054 51-256 (340)
87 COG1124 DppF ABC-type dipeptid 100.0 1.1E-38 2.4E-43 332.6 18.1 199 843-1055 21-227 (252)
88 TIGR03265 PhnT2 putative 2-ami 100.0 7.7E-38 1.7E-42 361.5 25.8 206 148-396 17-223 (353)
89 TIGR03258 PhnT 2-aminoethylpho 100.0 8.6E-38 1.9E-42 361.5 26.1 207 148-396 18-227 (362)
90 TIGR03258 PhnT 2-aminoethylpho 100.0 5.2E-38 1.1E-42 363.3 24.3 204 840-1055 16-224 (362)
91 COG1122 CbiO ABC-type cobalt t 100.0 3.6E-38 7.8E-43 340.5 21.3 201 842-1054 17-223 (235)
92 COG3840 ThiQ ABC-type thiamine 100.0 2.3E-38 5E-43 312.3 17.9 196 847-1054 17-214 (231)
93 PRK11650 ugpC glycerol-3-phosp 100.0 5.2E-38 1.1E-42 363.3 23.6 206 148-396 17-223 (356)
94 TIGR01186 proV glycine betaine 100.0 9.1E-38 2E-42 360.0 25.0 204 840-1055 4-215 (363)
95 KOG0058 Peptide exporter, ABC 100.0 2.2E-38 4.7E-43 373.4 19.8 214 142-397 475-691 (716)
96 cd03259 ABC_Carb_Solutes_like 100.0 8.1E-38 1.8E-42 339.4 22.8 200 841-1052 12-213 (213)
97 PRK10851 sulfate/thiosulfate t 100.0 9E-38 1.9E-42 361.0 24.5 207 840-1055 13-222 (353)
98 PRK11432 fbpC ferric transport 100.0 8.1E-38 1.8E-42 360.6 23.9 206 148-396 19-225 (351)
99 TIGR00960 3a0501s02 Type II (G 100.0 1.2E-37 2.6E-42 338.8 23.5 194 842-1047 16-215 (216)
100 PRK13537 nodulation ABC transp 100.0 1.9E-37 4.1E-42 353.1 26.2 206 148-397 20-227 (306)
101 TIGR01257 rim_protein retinal- 100.0 8.8E-36 1.9E-40 394.7 45.8 201 841-1054 942-1144(2272)
102 TIGR01288 nodI ATP-binding ABC 100.0 1.2E-37 2.6E-42 355.3 24.4 203 840-1054 15-219 (303)
103 COG0411 LivG ABC-type branched 100.0 3.3E-38 7.1E-43 329.5 17.9 214 833-1055 8-235 (250)
104 cd03293 ABC_NrtD_SsuB_transpor 100.0 1.7E-37 3.7E-42 338.5 24.3 200 842-1054 17-218 (220)
105 PRK09452 potA putrescine/sperm 100.0 1.2E-37 2.7E-42 361.4 24.5 203 841-1055 26-230 (375)
106 COG2274 SunT ABC-type bacterio 100.0 5.9E-38 1.3E-42 385.9 22.9 256 61-397 436-696 (709)
107 TIGR01186 proV glycine betaine 100.0 1.5E-37 3.2E-42 358.3 24.5 206 148-396 6-218 (363)
108 cd03265 ABC_DrrA DrrA is the A 100.0 1.6E-37 3.5E-42 338.7 23.4 203 840-1054 11-216 (220)
109 cd03269 ABC_putative_ATPase Th 100.0 1.6E-37 3.5E-42 336.2 23.2 199 841-1052 12-210 (210)
110 COG1124 DppF ABC-type dipeptid 100.0 1.6E-37 3.5E-42 323.8 21.5 205 149-397 21-231 (252)
111 PRK09452 potA putrescine/sperm 100.0 1.6E-37 3.5E-42 360.4 24.0 218 148-416 27-245 (375)
112 PRK11153 metN DL-methionine tr 100.0 3.2E-37 7E-42 356.4 26.2 202 841-1054 17-225 (343)
113 COG2884 FtsE Predicted ATPase 100.0 1.5E-37 3.3E-42 309.5 19.8 199 148-390 15-219 (223)
114 cd03219 ABC_Mj1267_LivG_branch 100.0 3E-37 6.5E-42 340.5 23.9 205 841-1054 12-227 (236)
115 PRK11607 potG putrescine trans 100.0 2.9E-37 6.2E-42 359.0 24.8 203 841-1055 31-235 (377)
116 COG3840 ThiQ ABC-type thiamine 100.0 1.3E-37 2.9E-42 307.0 18.5 201 153-396 17-218 (231)
117 TIGR03522 GldA_ABC_ATP gliding 100.0 2.7E-37 5.9E-42 351.8 24.0 202 840-1054 13-216 (301)
118 cd03218 ABC_YhbG The ABC trans 100.0 2.9E-37 6.2E-42 339.7 23.3 203 840-1054 11-217 (232)
119 PRK11000 maltose/maltodextrin 100.0 2.9E-37 6.2E-42 359.7 24.4 204 840-1055 14-219 (369)
120 PRK09536 btuD corrinoid ABC tr 100.0 2.2E-37 4.7E-42 361.1 23.4 207 840-1055 14-224 (402)
121 cd03260 ABC_PstB_phosphate_tra 100.0 3E-37 6.4E-42 338.4 22.9 204 841-1055 12-225 (227)
122 PRK10851 sulfate/thiosulfate t 100.0 6.1E-37 1.3E-41 354.1 26.4 210 148-396 15-225 (353)
123 cd03301 ABC_MalK_N The N-termi 100.0 3.7E-37 7.9E-42 334.3 23.2 200 841-1052 12-213 (213)
124 COG1122 CbiO ABC-type cobalt t 100.0 3.5E-37 7.5E-42 332.8 22.7 207 148-397 17-228 (235)
125 cd03296 ABC_CysA_sulfate_impor 100.0 4.5E-37 9.7E-42 339.5 24.1 205 841-1054 14-221 (239)
126 COG0410 LivF ABC-type branched 100.0 1.7E-37 3.7E-42 321.6 19.3 209 834-1055 8-222 (237)
127 cd03266 ABC_NatA_sodium_export 100.0 3E-37 6.6E-42 336.2 22.4 198 843-1052 19-218 (218)
128 cd03226 ABC_cobalt_CbiO_domain 100.0 2.5E-37 5.3E-42 333.5 21.1 192 842-1049 13-205 (205)
129 cd03268 ABC_BcrA_bacitracin_re 100.0 3.2E-37 6.9E-42 333.5 22.0 196 841-1052 12-208 (208)
130 cd03255 ABC_MJ0796_Lo1CDE_FtsE 100.0 3.9E-37 8.5E-42 335.3 21.9 193 842-1047 17-217 (218)
131 cd03256 ABC_PhnC_transporter A 100.0 5.2E-37 1.1E-41 339.7 22.7 204 842-1054 14-229 (241)
132 cd03258 ABC_MetN_methionine_tr 100.0 6E-37 1.3E-41 337.3 22.9 200 843-1054 19-225 (233)
133 KOG0062 ATPase component of AB 100.0 5.1E-37 1.1E-41 345.8 22.7 186 843-1053 378-563 (582)
134 cd03294 ABC_Pro_Gly_Bertaine T 100.0 7.6E-37 1.7E-41 342.9 23.9 209 834-1054 29-245 (269)
135 cd03234 ABCG_White The White s 100.0 1.5E-36 3.3E-41 332.3 25.4 206 841-1052 19-226 (226)
136 cd03261 ABC_Org_Solvent_Resist 100.0 1E-36 2.2E-41 335.8 24.0 206 148-395 13-224 (235)
137 PRK11607 potG putrescine trans 100.0 7.8E-37 1.7E-41 355.4 24.0 206 148-396 32-238 (377)
138 TIGR01188 drrA daunorubicin re 100.0 5.8E-37 1.2E-41 349.5 22.4 206 148-397 6-213 (302)
139 PRK09493 glnQ glutamine ABC tr 100.0 1.1E-36 2.4E-41 336.7 23.9 203 841-1054 13-220 (240)
140 PRK13637 cbiO cobalt transport 100.0 9.9E-37 2.2E-41 344.8 24.1 201 842-1054 20-229 (287)
141 cd03263 ABC_subfamily_A The AB 100.0 7.8E-37 1.7E-41 333.4 22.5 200 842-1054 15-216 (220)
142 PRK11629 lolD lipoprotein tran 100.0 1.7E-36 3.8E-41 333.5 25.2 200 842-1054 22-229 (233)
143 PRK11153 metN DL-methionine tr 100.0 1.8E-36 4E-41 350.2 26.4 206 148-396 18-229 (343)
144 COG4559 ABC-type hemin transpo 100.0 5.4E-37 1.2E-41 310.3 18.8 207 840-1056 12-227 (259)
145 PRK11264 putative amino-acid A 100.0 1.3E-36 2.7E-41 338.4 23.8 203 841-1054 15-228 (250)
146 cd03295 ABC_OpuCA_Osmoprotecti 100.0 1.1E-36 2.5E-41 336.9 23.3 201 842-1054 14-220 (242)
147 PRK11248 tauB taurine transpor 100.0 1.5E-36 3.3E-41 337.6 24.2 201 841-1054 13-215 (255)
148 cd03224 ABC_TM1139_LivF_branch 100.0 9.5E-37 2.1E-41 333.3 22.2 201 840-1054 11-216 (222)
149 COG0410 LivF ABC-type branched 100.0 1E-36 2.2E-41 315.9 21.1 206 148-397 16-226 (237)
150 COG4152 ABC-type uncharacteriz 100.0 4E-37 8.6E-42 317.2 17.8 210 833-1055 6-215 (300)
151 TIGR02673 FtsE cell division A 100.0 9.8E-37 2.1E-41 331.2 22.0 193 842-1045 15-213 (214)
152 PRK11000 maltose/maltodextrin 100.0 1.4E-36 3.1E-41 353.9 24.3 206 148-396 16-222 (369)
153 COG0411 LivG ABC-type branched 100.0 4E-37 8.6E-42 321.3 17.5 221 146-397 15-239 (250)
154 cd03292 ABC_FtsE_transporter F 100.0 1.2E-36 2.7E-41 330.5 22.0 194 842-1047 14-213 (214)
155 COG2274 SunT ABC-type bacterio 100.0 1.4E-35 3E-40 365.0 33.9 214 813-1054 468-691 (709)
156 PRK11831 putative ABC transpor 100.0 2.1E-36 4.6E-41 339.6 24.4 203 841-1054 19-228 (269)
157 TIGR02315 ABC_phnC phosphonate 100.0 9E-37 2E-41 338.2 21.1 206 841-1055 14-231 (243)
158 PRK13634 cbiO cobalt transport 100.0 2.2E-36 4.7E-41 342.6 24.5 201 842-1054 20-230 (290)
159 PRK13647 cbiO cobalt transport 100.0 2.5E-36 5.4E-41 339.5 24.8 201 842-1054 18-222 (274)
160 PRK13536 nodulation factor exp 100.0 1.9E-36 4.2E-41 348.1 24.2 206 148-397 54-261 (340)
161 cd03235 ABC_Metallic_Cations A 100.0 1.2E-36 2.7E-41 330.1 21.1 200 841-1052 11-213 (213)
162 PRK13651 cobalt transporter AT 100.0 2.7E-36 5.8E-41 342.9 24.6 202 842-1055 20-250 (305)
163 cd03264 ABC_drug_resistance_li 100.0 1.8E-36 3.9E-41 328.3 21.9 198 841-1052 12-211 (211)
164 PRK10895 lipopolysaccharide AB 100.0 2.3E-36 4.9E-41 334.4 23.1 204 840-1054 14-221 (241)
165 PRK13643 cbiO cobalt transport 100.0 3.6E-36 7.7E-41 340.5 25.2 201 842-1055 19-229 (288)
166 cd03225 ABC_cobalt_CbiO_domain 100.0 1.7E-36 3.7E-41 328.6 21.5 193 842-1045 14-210 (211)
167 COG4988 CydD ABC-type transpor 100.0 4E-35 8.8E-40 340.2 34.2 214 813-1055 317-539 (559)
168 KOG0057 Mitochondrial Fe/S clu 100.0 1.4E-36 3E-41 346.0 21.5 229 93-397 343-574 (591)
169 cd03262 ABC_HisP_GlnQ_permease 100.0 1.8E-36 3.9E-41 328.9 21.4 196 841-1047 12-212 (213)
170 PRK10619 histidine/lysine/argi 100.0 6.4E-36 1.4E-40 333.8 26.3 202 841-1054 17-236 (257)
171 PRK10908 cell division protein 100.0 2.9E-36 6.4E-41 329.2 23.0 196 842-1049 15-216 (222)
172 TIGR03864 PQQ_ABC_ATP ABC tran 100.0 4.4E-36 9.5E-41 330.9 24.4 201 841-1054 13-216 (236)
173 TIGR03740 galliderm_ABC gallid 100.0 4.7E-36 1E-40 327.9 24.2 198 841-1055 12-209 (223)
174 cd03257 ABC_NikE_OppD_transpor 100.0 3.2E-36 7E-41 330.6 22.7 200 843-1052 19-228 (228)
175 cd03296 ABC_CysA_sulfate_impor 100.0 8E-36 1.7E-40 329.5 25.9 209 148-395 15-224 (239)
176 COG1137 YhbG ABC-type (unclass 100.0 4.3E-37 9.4E-42 308.2 14.2 209 147-397 16-228 (243)
177 PRK11247 ssuB aliphatic sulfon 100.0 4.8E-36 1E-40 333.0 24.2 206 816-1054 12-218 (257)
178 PRK13631 cbiO cobalt transport 100.0 4.8E-36 1E-40 342.7 24.7 218 816-1054 21-260 (320)
179 TIGR00972 3a0107s01c2 phosphat 100.0 5.2E-36 1.1E-40 332.7 24.0 203 841-1054 13-227 (247)
180 PRK13650 cbiO cobalt transport 100.0 4.8E-36 1E-40 338.0 23.9 200 842-1054 20-224 (279)
181 cd03293 ABC_NrtD_SsuB_transpor 100.0 9E-36 2E-40 324.9 25.3 200 148-392 17-218 (220)
182 PRK13636 cbiO cobalt transport 100.0 7.4E-36 1.6E-40 337.2 25.3 216 816-1055 5-227 (283)
183 cd03259 ABC_Carb_Solutes_like 100.0 3.9E-36 8.5E-41 326.2 22.2 200 148-390 13-213 (213)
184 cd03265 ABC_DrrA DrrA is the A 100.0 4.1E-36 8.8E-41 327.7 22.3 205 148-395 13-219 (220)
185 TIGR02211 LolD_lipo_ex lipopro 100.0 5.8E-36 1.2E-40 326.8 23.5 195 842-1049 18-220 (221)
186 PRK11300 livG leucine/isoleuci 100.0 4.4E-36 9.6E-41 335.1 23.1 207 840-1055 16-239 (255)
187 KOG0058 Peptide exporter, ABC 100.0 5.4E-37 1.2E-41 361.6 16.3 215 815-1054 464-686 (716)
188 TIGR03005 ectoine_ehuA ectoine 100.0 8.8E-36 1.9E-40 331.8 25.2 203 841-1054 12-231 (252)
189 PRK13646 cbiO cobalt transport 100.0 4.1E-36 8.8E-41 339.9 22.7 200 842-1054 20-230 (286)
190 PRK13641 cbiO cobalt transport 100.0 5.3E-36 1.1E-40 339.1 23.6 201 842-1054 20-229 (287)
191 PRK10070 glycine betaine trans 100.0 5.9E-36 1.3E-40 348.8 24.5 203 840-1054 39-249 (400)
192 COG4525 TauB ABC-type taurine 100.0 2.6E-36 5.7E-41 300.6 18.2 201 842-1055 18-220 (259)
193 PRK13643 cbiO cobalt transport 100.0 1.1E-35 2.3E-40 336.6 25.8 224 149-416 20-255 (288)
194 TIGR01978 sufC FeS assembly AT 100.0 7.7E-36 1.7E-40 330.8 24.1 209 840-1054 11-229 (243)
195 PRK14268 phosphate ABC transpo 100.0 1.3E-35 2.7E-40 331.5 26.0 206 841-1054 24-237 (258)
196 PRK15079 oligopeptide ABC tran 100.0 1.4E-35 3E-40 340.2 26.9 204 841-1054 33-246 (331)
197 cd03294 ABC_Pro_Gly_Bertaine T 100.0 9.5E-36 2.1E-40 334.1 24.9 207 147-396 36-249 (269)
198 PRK13637 cbiO cobalt transport 100.0 6.6E-36 1.4E-40 338.1 23.7 218 148-408 20-248 (287)
199 COG4181 Predicted ABC-type tra 100.0 2.6E-36 5.7E-41 294.5 17.5 200 838-1050 19-226 (228)
200 TIGR01288 nodI ATP-binding ABC 100.0 6.1E-36 1.3E-40 341.3 23.5 206 148-397 17-224 (303)
201 PRK14247 phosphate ABC transpo 100.0 1E-35 2.3E-40 331.0 24.6 209 841-1054 15-229 (250)
202 PRK11124 artP arginine transpo 100.0 8.1E-36 1.8E-40 330.2 23.5 202 841-1054 14-225 (242)
203 PRK11614 livF leucine/isoleuci 100.0 5.5E-36 1.2E-40 330.5 22.0 201 841-1055 17-222 (237)
204 TIGR03415 ABC_choXWV_ATP choli 100.0 8.8E-36 1.9E-40 344.8 24.6 205 839-1055 34-250 (382)
205 cd03219 ABC_Mj1267_LivG_branch 100.0 8.9E-36 1.9E-40 328.7 23.5 214 148-395 13-230 (236)
206 COG4559 ABC-type hemin transpo 100.0 4.5E-36 9.7E-41 303.6 18.9 206 149-396 15-229 (259)
207 PRK13650 cbiO cobalt transport 100.0 1.7E-35 3.8E-40 333.5 25.9 204 149-396 21-228 (279)
208 PRK13644 cbiO cobalt transport 100.0 7.2E-36 1.6E-40 335.7 22.7 201 842-1055 15-220 (274)
209 PRK13548 hmuV hemin importer A 100.0 9.1E-36 2E-40 332.3 23.3 203 840-1054 13-225 (258)
210 PRK14267 phosphate ABC transpo 100.0 1.8E-35 3.8E-40 329.8 25.4 209 841-1054 16-232 (253)
211 TIGR03411 urea_trans_UrtD urea 100.0 1.2E-35 2.6E-40 328.9 23.7 204 841-1054 14-226 (242)
212 KOG0066 eIF2-interacting prote 100.0 6.3E-35 1.4E-39 319.0 28.6 210 813-1062 583-794 (807)
213 COG4988 CydD ABC-type transpor 100.0 6.1E-36 1.3E-40 347.0 22.0 200 149-397 335-543 (559)
214 cd03255 ABC_MJ0796_Lo1CDE_FtsE 100.0 9.4E-36 2E-40 324.5 22.2 195 148-386 17-218 (218)
215 cd03298 ABC_ThiQ_thiamine_tran 100.0 8.6E-36 1.9E-40 323.0 21.7 194 847-1052 16-211 (211)
216 cd03301 ABC_MalK_N The N-termi 100.0 1.2E-35 2.7E-40 322.3 22.9 199 149-390 14-213 (213)
217 PRK13635 cbiO cobalt transport 100.0 1.7E-35 3.7E-40 333.4 24.7 201 842-1055 20-225 (279)
218 cd03218 ABC_YhbG The ABC trans 100.0 1.2E-35 2.7E-40 326.7 23.1 204 148-395 13-220 (232)
219 cd03233 ABC_PDR_domain1 The pl 100.0 2E-35 4.4E-40 317.2 24.1 196 816-1052 3-202 (202)
220 PRK11231 fecE iron-dicitrate t 100.0 9.9E-36 2.2E-40 331.9 22.4 207 840-1055 13-223 (255)
221 cd03258 ABC_MetN_methionine_tr 100.0 1.1E-35 2.4E-40 327.2 22.6 204 149-395 19-228 (233)
222 TIGR03522 GldA_ABC_ATP gliding 100.0 9.9E-36 2.2E-40 339.0 22.8 205 148-397 15-221 (301)
223 PRK10575 iron-hydroxamate tran 100.0 1E-35 2.2E-40 333.4 22.5 206 841-1055 23-233 (265)
224 PRK13652 cbiO cobalt transport 100.0 2.2E-35 4.8E-40 332.6 25.3 201 842-1054 17-222 (277)
225 PRK14273 phosphate ABC transpo 100.0 2.4E-35 5.2E-40 328.8 25.3 202 842-1054 20-233 (254)
226 PRK11629 lolD lipoprotein tran 100.0 3.1E-35 6.8E-40 323.5 25.8 201 148-392 22-229 (233)
227 PRK10253 iron-enterobactin tra 100.0 1.7E-35 3.7E-40 331.7 24.0 206 841-1055 19-229 (265)
228 cd03232 ABC_PDR_domain2 The pl 100.0 2E-35 4.2E-40 314.9 23.2 173 842-1052 20-192 (192)
229 TIGR00960 3a0501s02 Type II (G 100.0 6.8E-36 1.5E-40 325.0 19.9 195 148-386 16-216 (216)
230 PRK13638 cbiO cobalt transport 100.0 1.2E-35 2.7E-40 333.9 22.6 202 841-1054 13-220 (271)
231 cd03266 ABC_NatA_sodium_export 100.0 1.4E-35 3.1E-40 323.0 22.4 198 149-390 19-218 (218)
232 cd03263 ABC_subfamily_A The AB 100.0 1E-35 2.2E-40 324.7 21.2 203 148-395 15-219 (220)
233 PRK14242 phosphate transporter 100.0 3.4E-35 7.4E-40 327.4 25.9 219 816-1054 6-232 (253)
234 PRK13634 cbiO cobalt transport 100.0 1.2E-35 2.6E-40 336.5 22.5 218 148-408 20-249 (290)
235 PRK10070 glycine betaine trans 100.0 1.7E-35 3.6E-40 345.1 24.3 206 148-396 41-253 (400)
236 TIGR03410 urea_trans_UrtE urea 100.0 1.3E-35 2.7E-40 326.2 22.1 201 840-1055 11-217 (230)
237 TIGR01184 ntrCD nitrate transp 100.0 1.3E-35 2.8E-40 325.5 22.0 198 845-1054 1-199 (230)
238 PRK09984 phosphonate/organopho 100.0 1.5E-35 3.2E-40 331.9 22.8 209 840-1055 15-238 (262)
239 PRK14245 phosphate ABC transpo 100.0 2.5E-35 5.3E-40 327.9 24.4 207 841-1054 15-229 (250)
240 cd03260 ABC_PstB_phosphate_tra 100.0 1.3E-35 2.8E-40 325.4 21.6 203 149-394 14-226 (227)
241 TIGR03608 L_ocin_972_ABC putat 100.0 1.9E-35 4.1E-40 319.2 22.4 191 840-1042 9-206 (206)
242 cd03267 ABC_NatA_like Similar 100.0 2.8E-35 6.1E-40 324.1 24.2 202 839-1052 31-236 (236)
243 PRK11831 putative ABC transpor 100.0 4.7E-35 1E-39 328.6 26.5 207 148-396 20-232 (269)
244 PRK14241 phosphate transporter 100.0 2.7E-35 5.8E-40 329.0 24.4 205 841-1054 16-237 (258)
245 PRK13649 cbiO cobalt transport 100.0 2.1E-35 4.6E-40 333.7 23.8 200 842-1054 20-229 (280)
246 cd03269 ABC_putative_ATPase Th 100.0 1.5E-35 3.2E-40 321.0 21.4 198 148-390 13-210 (210)
247 cd03224 ABC_TM1139_LivF_branch 100.0 2.1E-35 4.5E-40 322.7 22.7 202 148-395 13-219 (222)
248 TIGR03873 F420-0_ABC_ATP propo 100.0 1.8E-35 3.8E-40 330.1 22.4 207 840-1055 12-222 (256)
249 PRK13651 cobalt transporter AT 100.0 2.5E-35 5.5E-40 334.9 23.9 205 148-396 20-253 (305)
250 PRK09536 btuD corrinoid ABC tr 100.0 3.7E-35 8.1E-40 342.3 25.9 209 148-396 16-227 (402)
251 PRK09473 oppD oligopeptide tra 100.0 4.5E-35 9.7E-40 336.2 26.1 213 148-396 29-250 (330)
252 cd03256 ABC_PhnC_transporter A 100.0 2.4E-35 5.3E-40 326.4 23.1 213 148-395 14-232 (241)
253 PRK10584 putative ABC transpor 100.0 3.7E-35 8.1E-40 322.0 24.3 196 842-1050 23-226 (228)
254 PRK13639 cbiO cobalt transport 100.0 4.1E-35 8.9E-40 330.0 25.2 202 842-1055 15-222 (275)
255 PRK09473 oppD oligopeptide tra 100.0 4.8E-35 1E-39 335.9 26.1 209 841-1055 28-247 (330)
256 PRK10744 pstB phosphate transp 100.0 4.8E-35 1E-39 327.2 25.3 216 815-1054 12-239 (260)
257 PRK11022 dppD dipeptide transp 100.0 3.7E-35 8.1E-40 336.6 25.0 207 842-1054 20-238 (326)
258 PRK13631 cbiO cobalt transport 100.0 4E-35 8.7E-40 335.2 25.1 216 148-408 39-279 (320)
259 TIGR03415 ABC_choXWV_ATP choli 100.0 3.1E-35 6.8E-40 340.3 24.5 208 146-396 35-253 (382)
260 PRK09493 glnQ glutamine ABC tr 100.0 6E-35 1.3E-39 322.8 25.7 205 148-396 14-224 (240)
261 COG4175 ProV ABC-type proline/ 100.0 5.6E-36 1.2E-40 319.3 16.6 202 842-1055 41-250 (386)
262 COG4175 ProV ABC-type proline/ 100.0 7.8E-36 1.7E-40 318.2 17.6 222 147-419 40-268 (386)
263 PRK11264 putative amino-acid A 100.0 5.2E-35 1.1E-39 325.5 25.0 205 149-396 17-232 (250)
264 PRK13647 cbiO cobalt transport 100.0 3.4E-35 7.3E-40 330.3 23.7 203 149-395 19-225 (274)
265 PRK14237 phosphate transporter 100.0 7.9E-35 1.7E-39 326.5 26.5 221 814-1054 18-246 (267)
266 TIGR02769 nickel_nikE nickel i 100.0 3.3E-35 7.2E-40 329.3 23.4 203 841-1054 23-235 (265)
267 PRK14269 phosphate ABC transpo 100.0 3.8E-35 8.3E-40 325.4 23.7 209 840-1054 13-225 (246)
268 PRK11308 dppF dipeptide transp 100.0 3.7E-35 8E-40 336.5 24.2 203 842-1055 28-240 (327)
269 PRK13549 xylose transporter AT 100.0 2.4E-35 5.2E-40 360.5 24.1 211 840-1057 16-230 (506)
270 PRK14235 phosphate transporter 100.0 6.6E-35 1.4E-39 327.1 25.7 220 816-1054 19-246 (267)
271 cd03295 ABC_OpuCA_Osmoprotecti 100.0 3.3E-35 7.2E-40 325.2 23.0 206 148-396 14-224 (242)
272 PRK13648 cbiO cobalt transport 100.0 5.5E-35 1.2E-39 328.3 25.1 201 842-1055 22-227 (269)
273 cd03268 ABC_BcrA_bacitracin_re 100.0 2.6E-35 5.7E-40 318.5 21.6 195 148-390 13-208 (208)
274 TIGR02142 modC_ABC molybdenum 100.0 3.2E-35 6.9E-40 341.6 23.8 194 847-1054 15-216 (354)
275 PRK13632 cbiO cobalt transport 100.0 4.7E-35 1E-39 329.0 24.3 201 841-1054 21-226 (271)
276 cd03300 ABC_PotA_N PotA is an 100.0 4.7E-35 1E-39 321.8 23.7 202 841-1054 12-215 (232)
277 PRK13645 cbiO cobalt transport 100.0 4.5E-35 9.8E-40 332.3 24.3 200 843-1054 25-235 (289)
278 PRK13646 cbiO cobalt transport 100.0 5.2E-35 1.1E-39 330.9 24.6 205 148-396 20-234 (286)
279 PRK14250 phosphate ABC transpo 100.0 4.2E-35 9.2E-40 323.9 23.2 197 841-1054 15-216 (241)
280 cd03233 ABC_PDR_domain1 The pl 100.0 5.1E-35 1.1E-39 314.1 23.2 183 146-390 18-202 (202)
281 cd03234 ABCG_White The White s 100.0 3E-35 6.4E-40 322.1 21.8 205 148-390 20-226 (226)
282 cd03226 ABC_cobalt_CbiO_domain 100.0 2.3E-35 4.9E-40 318.2 20.5 192 148-387 13-205 (205)
283 PRK11174 cysteine/glutathione 100.0 2.2E-35 4.8E-40 368.3 23.4 206 149-397 364-572 (588)
284 cd03297 ABC_ModC_molybdenum_tr 100.0 4.2E-35 9.2E-40 318.2 22.5 197 839-1052 10-214 (214)
285 PRK15079 oligopeptide ABC tran 100.0 4.5E-35 9.8E-40 335.9 23.9 209 147-396 33-250 (331)
286 PRK13547 hmuV hemin importer A 100.0 3.4E-35 7.4E-40 328.9 22.4 209 840-1055 12-240 (272)
287 PRK13635 cbiO cobalt transport 100.0 6.5E-35 1.4E-39 328.7 24.7 215 149-407 21-242 (279)
288 PRK14259 phosphate ABC transpo 100.0 6.5E-35 1.4E-39 327.3 24.6 218 816-1054 13-248 (269)
289 TIGR02315 ABC_phnC phosphonate 100.0 3.1E-35 6.6E-40 325.9 21.7 213 148-395 15-233 (243)
290 cd03299 ABC_ModC_like Archeal 100.0 5.9E-35 1.3E-39 321.5 23.7 199 844-1054 14-214 (235)
291 TIGR00968 3a0106s01 sulfate AB 100.0 5.8E-35 1.3E-39 322.0 23.5 202 841-1054 12-215 (237)
292 PRK00349 uvrA excinuclease ABC 100.0 1.3E-33 2.9E-38 356.1 39.0 123 916-1054 791-922 (943)
293 cd03213 ABCG_EPDR ABCG transpo 100.0 6.5E-35 1.4E-39 311.2 23.1 171 842-1052 22-194 (194)
294 TIGR01277 thiQ thiamine ABC tr 100.0 5.4E-35 1.2E-39 317.1 22.8 198 844-1053 13-212 (213)
295 PRK14256 phosphate ABC transpo 100.0 6.7E-35 1.4E-39 324.8 24.1 208 841-1054 16-231 (252)
296 PRK11144 modC molybdate transp 100.0 4.2E-35 9.1E-40 340.1 23.2 191 847-1055 16-214 (352)
297 PRK13640 cbiO cobalt transport 100.0 8.1E-35 1.8E-39 328.6 24.8 202 842-1054 20-227 (282)
298 cd03257 ABC_NikE_OppD_transpor 100.0 1.1E-34 2.4E-39 318.4 25.2 201 149-390 19-228 (228)
299 TIGR00972 3a0107s01c2 phosphat 100.0 1.2E-34 2.7E-39 321.7 25.8 206 149-396 15-231 (247)
300 PRK15093 antimicrobial peptide 100.0 6.9E-35 1.5E-39 335.6 24.4 210 841-1054 19-243 (330)
301 KOG0055 Multidrug/pheromone ex 100.0 1.9E-35 4.1E-40 367.1 20.9 214 142-397 997-1213(1228)
302 TIGR02211 LolD_lipo_ex lipopro 100.0 9E-35 1.9E-39 317.4 23.8 196 148-387 18-220 (221)
303 PRK15112 antimicrobial peptide 100.0 5.4E-35 1.2E-39 327.8 22.7 202 842-1054 26-234 (267)
304 PRK11022 dppD dipeptide transp 100.0 1.5E-34 3.2E-39 331.7 26.7 213 148-396 20-242 (326)
305 COG1245 Predicted ATPase, RNas 100.0 2.5E-34 5.5E-39 318.6 27.3 169 849-1043 361-530 (591)
306 COG0444 DppD ABC-type dipeptid 100.0 1.1E-34 2.4E-39 316.3 24.2 215 147-396 17-242 (316)
307 PRK13633 cobalt transporter AT 100.0 5.7E-35 1.2E-39 329.7 22.7 201 842-1055 23-229 (280)
308 PRK11248 tauB taurine transpor 100.0 1.5E-34 3.2E-39 321.7 25.6 201 148-393 14-216 (255)
309 PRK13636 cbiO cobalt transport 100.0 9.1E-35 2E-39 328.4 24.2 206 149-397 20-231 (283)
310 cd03264 ABC_drug_resistance_li 100.0 4.3E-35 9.2E-40 317.6 20.6 196 149-390 14-211 (211)
311 TIGR03864 PQQ_ABC_ATP ABC tran 100.0 9.2E-35 2E-39 320.4 23.6 205 148-396 14-220 (236)
312 PRK14239 phosphate transporter 100.0 1.5E-34 3.2E-39 322.2 25.3 207 841-1054 17-231 (252)
313 PRK14274 phosphate ABC transpo 100.0 1.1E-34 2.3E-39 324.4 24.2 218 817-1054 13-238 (259)
314 PRK11247 ssuB aliphatic sulfon 100.0 1.2E-34 2.6E-39 321.8 24.4 194 149-393 26-219 (257)
315 PRK11308 dppF dipeptide transp 100.0 1.9E-34 4.2E-39 330.6 26.8 207 148-396 28-243 (327)
316 PRK10771 thiQ thiamine transpo 100.0 8.7E-35 1.9E-39 319.7 22.9 196 847-1054 17-214 (232)
317 PRK14270 phosphate ABC transpo 100.0 1.1E-34 2.4E-39 322.9 23.7 206 841-1054 16-230 (251)
318 PRK14240 phosphate transporter 100.0 1.7E-34 3.6E-39 321.3 25.2 206 842-1054 16-229 (250)
319 PRK13632 cbiO cobalt transport 100.0 1.2E-34 2.5E-39 325.8 24.1 205 148-396 22-230 (271)
320 PRK14244 phosphate ABC transpo 100.0 1.1E-34 2.5E-39 322.7 23.7 208 841-1054 17-232 (251)
321 TIGR02770 nickel_nikD nickel i 100.0 8.5E-35 1.8E-39 319.3 22.3 201 844-1054 1-210 (230)
322 PRK14257 phosphate ABC transpo 100.0 1.8E-34 3.8E-39 330.8 25.8 221 816-1055 80-309 (329)
323 COG0444 DppD ABC-type dipeptid 100.0 1.4E-34 3E-39 315.6 23.6 210 841-1055 17-239 (316)
324 cd03267 ABC_NatA_like Similar 100.0 1.4E-34 3E-39 318.6 23.9 202 146-390 32-236 (236)
325 PRK10762 D-ribose transporter 100.0 7.9E-35 1.7E-39 355.5 24.1 209 840-1057 15-228 (501)
326 PRK00635 excinuclease ABC subu 100.0 3.4E-33 7.4E-38 364.6 40.8 135 913-1055 759-902 (1809)
327 PRK14258 phosphate ABC transpo 100.0 2.4E-34 5.2E-39 321.6 25.6 220 817-1054 8-240 (261)
328 PRK14262 phosphate ABC transpo 100.0 2.3E-34 5E-39 320.2 25.3 207 841-1054 15-229 (250)
329 TIGR03797 NHPM_micro_ABC2 NHPM 100.0 7E-35 1.5E-39 369.4 23.9 205 148-397 466-673 (686)
330 PRK11144 modC molybdate transp 100.0 8.5E-35 1.8E-39 337.5 22.6 195 153-396 16-217 (352)
331 TIGR02982 heterocyst_DevA ABC 100.0 1.5E-34 3.4E-39 315.1 23.2 195 842-1048 18-219 (220)
332 PRK14260 phosphate ABC transpo 100.0 2.3E-34 5.1E-39 321.5 25.2 204 841-1054 19-238 (259)
333 PRK10895 lipopolysaccharide AB 100.0 1.4E-34 3E-39 320.2 22.9 206 148-396 16-225 (241)
334 COG4598 HisP ABC-type histidin 100.0 2.7E-35 6E-40 289.1 15.2 213 832-1055 9-237 (256)
335 PRK14253 phosphate ABC transpo 100.0 1.6E-34 3.5E-39 321.2 23.5 207 841-1054 15-228 (249)
336 TIGR02673 FtsE cell division A 100.0 8.6E-35 1.9E-39 316.0 20.9 194 148-385 15-214 (214)
337 PRK14257 phosphate ABC transpo 100.0 2.1E-34 4.5E-39 330.2 25.1 211 148-396 95-312 (329)
338 KOG0057 Mitochondrial Fe/S clu 100.0 2.3E-35 5.1E-40 335.9 16.9 212 813-1054 348-569 (591)
339 PRK10619 histidine/lysine/argi 100.0 2.3E-34 4.9E-39 321.3 24.6 205 148-396 18-240 (257)
340 PRK13642 cbiO cobalt transport 100.0 2.3E-34 5.1E-39 324.2 24.9 200 842-1054 20-224 (277)
341 PRK09700 D-allose transporter 100.0 9.8E-35 2.1E-39 355.7 23.7 208 840-1056 16-231 (510)
342 TIGR03410 urea_trans_UrtE urea 100.0 1.4E-34 3E-39 317.9 22.4 202 148-395 13-219 (230)
343 cd03292 ABC_FtsE_transporter F 100.0 8.2E-35 1.8E-39 316.2 20.4 195 148-386 14-214 (214)
344 PRK14273 phosphate ABC transpo 100.0 3.3E-34 7.2E-39 319.6 25.8 206 149-396 21-237 (254)
345 COG4525 TauB ABC-type taurine 100.0 1.1E-34 2.4E-39 289.0 19.4 206 148-398 18-225 (259)
346 PRK14236 phosphate transporter 100.0 3.5E-34 7.7E-39 322.1 26.1 219 816-1054 25-251 (272)
347 TIGR03005 ectoine_ehuA ectoine 100.0 2.6E-34 5.5E-39 320.1 24.7 206 148-396 13-235 (252)
348 PRK13641 cbiO cobalt transport 100.0 1E-34 2.2E-39 328.6 21.8 205 148-396 20-233 (287)
349 PRK13648 cbiO cobalt transport 100.0 2.7E-34 5.9E-39 322.7 24.9 204 149-396 23-230 (269)
350 PRK14263 phosphate ABC transpo 100.0 2.2E-34 4.8E-39 321.3 24.1 207 840-1054 19-240 (261)
351 PRK14272 phosphate ABC transpo 100.0 2.6E-34 5.6E-39 320.3 24.3 204 841-1054 16-231 (252)
352 cd03220 ABC_KpsT_Wzt ABC_KpsT_ 100.0 2.7E-34 5.8E-39 313.6 23.8 198 834-1052 27-224 (224)
353 PRK10418 nikD nickel transport 100.0 3E-34 6.4E-39 319.7 24.6 201 842-1054 16-225 (254)
354 PRK10584 putative ABC transpor 100.0 3.9E-34 8.5E-39 313.9 25.1 198 148-389 23-227 (228)
355 PRK13652 cbiO cobalt transport 100.0 3.1E-34 6.7E-39 323.2 24.8 205 149-396 18-226 (277)
356 PRK13543 cytochrome c biogenes 100.0 1.6E-34 3.6E-39 313.3 21.6 189 841-1043 23-211 (214)
357 PRK14249 phosphate ABC transpo 100.0 2.6E-34 5.5E-39 319.9 23.6 207 841-1054 16-230 (251)
358 PRK14250 phosphate ABC transpo 100.0 3.9E-34 8.4E-39 316.2 24.9 199 149-395 17-219 (241)
359 PRK14242 phosphate transporter 100.0 6.4E-34 1.4E-38 317.2 26.8 209 149-395 20-235 (253)
360 PRK14268 phosphate ABC transpo 100.0 4.3E-34 9.4E-39 319.2 25.5 204 149-395 26-240 (258)
361 PRK11124 artP arginine transpo 100.0 2.6E-34 5.6E-39 318.2 23.4 203 149-395 16-228 (242)
362 PRK14275 phosphate ABC transpo 100.0 5.4E-34 1.2E-38 322.4 26.4 215 816-1054 39-265 (286)
363 PRK13644 cbiO cobalt transport 100.0 1.7E-34 3.6E-39 324.7 22.0 203 149-396 16-223 (274)
364 PRK14261 phosphate ABC transpo 100.0 4.5E-34 9.7E-39 318.3 25.2 207 841-1054 18-232 (253)
365 cd03231 ABC_CcmA_heme_exporter 100.0 1.3E-34 2.8E-39 311.0 20.1 186 840-1042 11-198 (201)
366 PRK11614 livF leucine/isoleuci 100.0 1.8E-34 3.9E-39 318.4 21.7 203 148-396 18-225 (237)
367 TIGR01184 ntrCD nitrate transp 100.0 2.3E-34 5E-39 315.6 22.3 202 151-395 1-202 (230)
368 TIGR03411 urea_trans_UrtD urea 100.0 2.9E-34 6.2E-39 317.9 23.3 211 148-395 15-229 (242)
369 PRK11701 phnK phosphonate C-P 100.0 3.2E-34 6.9E-39 320.4 23.8 202 842-1054 19-236 (258)
370 TIGR02142 modC_ABC molybdenum 100.0 3E-34 6.4E-39 333.5 24.3 199 153-396 15-220 (354)
371 TIGR02770 nickel_nikD nickel i 100.0 2.4E-34 5.2E-39 315.7 22.3 207 150-396 1-214 (230)
372 PRK14271 phosphate ABC transpo 100.0 3.4E-34 7.5E-39 322.3 24.1 219 816-1054 21-246 (276)
373 TIGR03740 galliderm_ABC gallid 100.0 3.4E-34 7.3E-39 313.2 23.2 197 148-393 13-209 (223)
374 COG1132 MdlB ABC-type multidru 100.0 1.5E-34 3.3E-39 358.8 23.2 209 147-397 341-552 (567)
375 PRK13538 cytochrome c biogenes 100.0 1.6E-34 3.5E-39 311.1 20.3 188 841-1042 13-202 (204)
376 PRK13548 hmuV hemin importer A 100.0 3.4E-34 7.3E-39 319.7 23.6 206 148-396 15-229 (258)
377 PRK10575 iron-hydroxamate tran 100.0 4.2E-34 9E-39 320.4 24.4 209 148-395 24-235 (265)
378 PRK10908 cell division protein 100.0 2.2E-34 4.7E-39 314.5 21.5 196 148-387 15-216 (222)
379 PRK13640 cbiO cobalt transport 100.0 4.5E-34 9.8E-39 322.5 24.7 207 149-396 21-231 (282)
380 PRK14251 phosphate ABC transpo 100.0 5.7E-34 1.2E-38 317.2 25.2 203 841-1054 16-230 (251)
381 PRK11176 lipid transporter ATP 100.0 2.1E-34 4.6E-39 359.2 24.2 209 148-397 356-567 (582)
382 TIGR02769 nickel_nikE nickel i 100.0 4.1E-34 8.9E-39 320.5 24.0 207 148-396 24-239 (265)
383 PRK14248 phosphate ABC transpo 100.0 3.1E-34 6.6E-39 322.2 22.8 218 817-1054 22-247 (268)
384 PRK13645 cbiO cobalt transport 100.0 4E-34 8.7E-39 324.5 23.9 205 149-396 25-239 (289)
385 PRK14254 phosphate ABC transpo 100.0 8.7E-34 1.9E-38 320.3 26.5 213 816-1054 39-264 (285)
386 PRK14237 phosphate transporter 100.0 1.3E-33 2.7E-38 316.7 27.6 211 148-396 33-250 (267)
387 cd03225 ABC_cobalt_CbiO_domain 100.0 2.2E-34 4.7E-39 312.1 20.6 194 148-385 14-211 (211)
388 cd03230 ABC_DR_subfamily_A Thi 100.0 2.1E-34 4.6E-39 301.7 19.9 157 842-1045 13-171 (173)
389 PRK13649 cbiO cobalt transport 100.0 4.8E-34 1E-38 322.7 24.3 205 148-396 20-233 (280)
390 TIGR02633 xylG D-xylose ABC tr 100.0 3.3E-34 7.3E-39 350.4 24.7 210 840-1056 12-227 (500)
391 PRK15056 manganese/iron transp 100.0 4.4E-34 9.6E-39 321.3 23.8 204 842-1055 20-226 (272)
392 PRK10982 galactose/methyl gala 100.0 3E-34 6.5E-39 349.7 24.2 208 840-1056 9-220 (491)
393 PRK14247 phosphate ABC transpo 100.0 5.7E-34 1.2E-38 317.0 24.4 209 148-396 16-233 (250)
394 PRK15093 antimicrobial peptide 100.0 7.8E-34 1.7E-38 326.9 26.2 217 148-396 20-247 (330)
395 PRK15439 autoinducer 2 ABC tra 100.0 2.6E-34 5.6E-39 351.2 23.6 211 817-1056 12-226 (510)
396 PRK13633 cobalt transporter AT 100.0 3.4E-34 7.3E-39 323.5 22.7 205 148-396 23-232 (280)
397 cd03298 ABC_ThiQ_thiamine_tran 100.0 3.4E-34 7.3E-39 310.5 21.8 195 153-390 16-211 (211)
398 PRK10790 putative multidrug tr 100.0 4.5E-34 9.8E-39 356.6 26.2 206 149-397 355-563 (592)
399 PRK14255 phosphate ABC transpo 100.0 6.2E-34 1.3E-38 317.1 24.5 207 841-1054 17-231 (252)
400 TIGR01166 cbiO cobalt transpor 100.0 2.5E-34 5.3E-39 306.3 20.3 179 841-1029 4-188 (190)
401 CHL00131 ycf16 sulfate ABC tra 100.0 6.3E-34 1.4E-38 317.2 24.5 209 841-1055 19-237 (252)
402 TIGR01978 sufC FeS assembly AT 100.0 5.9E-34 1.3E-38 315.7 24.1 213 148-396 13-233 (243)
403 PRK11300 livG leucine/isoleuci 100.0 5.8E-34 1.3E-38 318.0 24.2 221 148-396 18-242 (255)
404 PRK10744 pstB phosphate transp 100.0 9.6E-34 2.1E-38 316.7 25.8 210 149-396 27-243 (260)
405 PRK10419 nikE nickel transport 100.0 4.8E-34 1E-38 320.1 23.5 205 841-1056 24-238 (268)
406 PRK14269 phosphate ABC transpo 100.0 9.7E-34 2.1E-38 314.2 25.6 212 148-396 15-229 (246)
407 COG4987 CydC ABC-type transpor 100.0 1E-34 2.2E-39 330.7 18.0 202 147-397 350-561 (573)
408 TIGR03873 F420-0_ABC_ATP propo 100.0 6.4E-34 1.4E-38 317.6 24.2 208 148-395 14-224 (256)
409 PRK13639 cbiO cobalt transport 100.0 6.3E-34 1.4E-38 320.4 24.3 204 149-396 16-225 (275)
410 cd03235 ABC_Metallic_Cations A 100.0 2.3E-34 4.9E-39 312.4 19.9 200 148-390 12-213 (213)
411 COG4604 CeuD ABC-type enteroch 100.0 2.6E-35 5.6E-40 294.3 11.4 213 834-1056 6-222 (252)
412 PRK13638 cbiO cobalt transport 100.0 5.3E-34 1.1E-38 320.7 23.5 204 149-396 15-224 (271)
413 PRK13642 cbiO cobalt transport 100.0 1E-33 2.3E-38 319.0 25.9 205 148-396 20-228 (277)
414 cd03252 ABCC_Hemolysin The ABC 100.0 1.9E-34 4.2E-39 318.2 19.5 196 842-1054 15-220 (237)
415 COG4618 ArpD ABC-type protease 100.0 2.4E-34 5.1E-39 324.3 20.4 235 92-399 325-562 (580)
416 PRK03695 vitamin B12-transport 100.0 5.5E-34 1.2E-38 316.1 23.1 197 844-1054 11-217 (248)
417 PRK11288 araG L-arabinose tran 100.0 3.9E-34 8.4E-39 349.4 24.0 204 841-1053 16-223 (501)
418 COG1129 MglA ABC-type sugar tr 100.0 4.8E-34 1E-38 331.2 23.5 225 833-1066 12-243 (500)
419 cd03300 ABC_PotA_N PotA is an 100.0 7.9E-34 1.7E-38 312.0 24.0 206 148-396 13-219 (232)
420 PRK14235 phosphate transporter 100.0 1.1E-33 2.5E-38 317.1 25.6 212 148-396 32-250 (267)
421 PRK14265 phosphate ABC transpo 100.0 9.9E-34 2.2E-38 318.4 25.2 219 816-1055 20-254 (274)
422 TIGR00630 uvra excinuclease AB 100.0 1.6E-32 3.4E-37 345.8 38.7 123 916-1054 789-920 (924)
423 cd03299 ABC_ModC_like Archeal 100.0 7.2E-34 1.6E-38 312.9 23.2 204 150-396 14-218 (235)
424 PRK10247 putative ABC transpor 100.0 3.4E-34 7.5E-39 313.3 20.5 197 841-1052 19-220 (225)
425 PRK09984 phosphonate/organopho 100.0 4.1E-34 9E-39 320.2 21.6 216 148-395 17-240 (262)
426 PRK14267 phosphate ABC transpo 100.0 7.2E-34 1.6E-38 316.8 23.4 212 149-396 18-236 (253)
427 TIGR03796 NHPM_micro_ABC1 NHPM 100.0 2.6E-34 5.6E-39 365.9 22.6 206 148-397 492-700 (710)
428 PRK14243 phosphate transporter 100.0 9E-34 1.9E-38 317.4 24.1 206 841-1054 22-243 (264)
429 TIGR00958 3a01208 Conjugate Tr 100.0 6E-34 1.3E-38 360.6 25.4 206 148-397 494-702 (711)
430 PRK14274 phosphate ABC transpo 100.0 1.5E-33 3.3E-38 315.0 25.6 210 149-396 26-242 (259)
431 PRK11174 cysteine/glutathione 100.0 2.6E-34 5.6E-39 358.7 21.6 210 815-1054 348-567 (588)
432 PRK14245 phosphate ABC transpo 100.0 1.5E-33 3.2E-38 313.6 25.2 211 148-396 16-233 (250)
433 PRK14270 phosphate ABC transpo 100.0 2E-33 4.4E-38 312.7 26.3 207 148-396 17-234 (251)
434 TIGR03797 NHPM_micro_ABC2 NHPM 100.0 2.2E-34 4.8E-39 364.8 21.1 208 816-1054 451-668 (686)
435 PRK10771 thiQ thiamine transpo 100.0 9.3E-34 2E-38 311.6 23.2 201 153-396 17-218 (232)
436 PRK14238 phosphate transporter 100.0 7.9E-34 1.7E-38 318.9 22.9 218 816-1054 24-250 (271)
437 PRK15112 antimicrobial peptide 100.0 8.2E-34 1.8E-38 318.2 23.1 207 148-396 26-238 (267)
438 PRK14246 phosphate ABC transpo 100.0 1E-33 2.2E-38 315.3 23.6 208 840-1054 21-236 (257)
439 PRK10253 iron-enterobactin tra 100.0 9.8E-34 2.1E-38 317.4 23.5 209 148-396 20-232 (265)
440 PRK14239 phosphate transporter 100.0 2.1E-33 4.6E-38 312.9 26.1 210 149-396 19-235 (252)
441 cd03289 ABCC_CFTR2 The CFTR su 100.0 4.2E-34 9.2E-39 319.5 20.4 196 842-1055 17-221 (275)
442 TIGR01193 bacteriocin_ABC ABC- 100.0 6.9E-32 1.5E-36 343.3 43.3 210 816-1054 473-692 (708)
443 PRK11160 cysteine/glutathione 100.0 7.1E-34 1.5E-38 352.2 24.3 200 149-397 354-562 (574)
444 TIGR01277 thiQ thiamine ABC tr 100.0 1.2E-33 2.6E-38 306.6 23.1 199 150-391 13-212 (213)
445 TIGR03375 type_I_sec_LssB type 100.0 6.8E-34 1.5E-38 360.9 24.7 208 148-397 478-688 (694)
446 PRK11231 fecE iron-dicitrate t 100.0 7.1E-34 1.5E-38 317.0 21.9 208 148-395 15-225 (255)
447 PRK14240 phosphate transporter 100.0 2.2E-33 4.7E-38 312.4 25.7 210 149-396 17-233 (250)
448 TIGR00968 3a0106s01 sulfate AB 100.0 1.3E-33 2.8E-38 311.2 23.6 206 148-396 13-219 (237)
449 cd03262 ABC_HisP_GlnQ_permease 100.0 4.2E-34 9.1E-39 310.4 19.4 195 148-386 13-213 (213)
450 cd03251 ABCC_MsbA MsbA is an e 100.0 2.3E-34 5E-39 317.1 17.5 195 843-1054 16-220 (234)
451 TIGR02323 CP_lyasePhnK phospho 100.0 9.8E-34 2.1E-38 315.7 22.7 203 841-1054 15-233 (253)
452 PRK14256 phosphate ABC transpo 100.0 1.6E-33 3.6E-38 313.6 24.3 212 148-396 17-235 (252)
453 PRK13539 cytochrome c biogenes 100.0 4.9E-34 1.1E-38 307.9 19.4 187 840-1043 13-199 (207)
454 cd03229 ABC_Class3 This class 100.0 4.5E-34 9.7E-39 300.7 18.5 160 841-1045 12-177 (178)
455 PRK09580 sufC cysteine desulfu 100.0 1.4E-33 3.1E-38 313.6 23.5 208 841-1054 13-230 (248)
456 cd03245 ABCC_bacteriocin_expor 100.0 4E-34 8.6E-39 312.1 18.6 195 842-1052 17-220 (220)
457 TIGR01189 ccmA heme ABC export 100.0 6.9E-34 1.5E-38 304.8 20.1 185 840-1041 11-197 (198)
458 PRK14266 phosphate ABC transpo 100.0 1.4E-33 3E-38 313.9 23.1 207 841-1054 15-229 (250)
459 PRK14264 phosphate ABC transpo 100.0 1.8E-33 4E-38 320.8 23.9 221 816-1054 45-284 (305)
460 COG1132 MdlB ABC-type multidru 100.0 3.3E-34 7.1E-39 355.8 19.3 211 815-1054 327-547 (567)
461 PRK13546 teichoic acids export 100.0 4.2E-33 9.1E-38 310.5 26.1 194 840-1055 35-228 (264)
462 PRK14259 phosphate ABC transpo 100.0 2E-33 4.2E-38 315.4 23.6 209 148-396 26-252 (269)
463 COG4148 ModC ABC-type molybdat 100.0 2E-34 4.2E-39 302.4 14.2 195 153-396 16-217 (352)
464 KOG0056 Heavy metal exporter H 100.0 1.1E-34 2.4E-39 321.6 12.9 210 146-397 549-761 (790)
465 PRK14241 phosphate transporter 100.0 1.9E-33 4.2E-38 314.1 23.2 207 149-396 18-241 (258)
466 TIGR01193 bacteriocin_ABC ABC- 100.0 7.1E-34 1.5E-38 361.5 22.4 207 149-397 488-697 (708)
467 PRK14248 phosphate ABC transpo 100.0 6.3E-33 1.4E-37 311.6 27.4 210 149-396 35-251 (268)
468 cd03252 ABCC_Hemolysin The ABC 100.0 1.7E-33 3.7E-38 310.7 22.1 205 148-396 15-224 (237)
469 PRK14252 phosphate ABC transpo 100.0 4.4E-33 9.4E-38 312.3 25.7 219 816-1054 16-244 (265)
470 cd03254 ABCC_Glucan_exporter_l 100.0 7.9E-34 1.7E-38 311.8 19.1 197 842-1054 16-221 (229)
471 cd03249 ABC_MTABC3_MDL1_MDL2 M 100.0 5.4E-34 1.2E-38 314.9 17.7 196 842-1054 16-221 (238)
472 PRK11176 lipid transporter ATP 100.0 6.2E-34 1.3E-38 355.0 20.3 213 815-1054 340-562 (582)
473 PRK13547 hmuV hemin importer A 100.0 4.3E-33 9.4E-38 312.0 25.0 212 148-395 14-242 (272)
474 cd03215 ABC_Carb_Monos_II This 100.0 1.2E-33 2.5E-38 298.7 19.0 160 844-1047 15-181 (182)
475 PRK14251 phosphate ABC transpo 100.0 5E-33 1.1E-37 309.6 25.1 211 148-396 17-234 (251)
476 PRK13545 tagH teichoic acids e 100.0 3.7E-33 8E-38 327.1 25.0 192 842-1055 37-228 (549)
477 PRK14244 phosphate ABC transpo 100.0 2.8E-33 6.2E-38 311.5 23.0 212 148-396 18-236 (251)
478 PRK11701 phnK phosphonate C-P 100.0 3.7E-33 7.9E-38 311.8 23.8 206 149-396 20-240 (258)
479 PRK13540 cytochrome c biogenes 100.0 1.4E-33 3E-38 302.9 19.5 183 841-1040 13-197 (200)
480 cd03289 ABCC_CFTR2 The CFTR su 100.0 2E-33 4.3E-38 314.1 21.5 198 149-397 18-225 (275)
481 PRK10418 nikD nickel transport 100.0 4.2E-33 9.1E-38 310.5 24.1 206 149-396 17-229 (254)
482 TIGR03796 NHPM_micro_ABC1 NHPM 100.0 5.7E-34 1.2E-38 362.8 19.4 209 816-1054 477-695 (710)
483 PRK14260 phosphate ABC transpo 100.0 5.4E-33 1.2E-37 310.5 24.9 206 149-396 21-242 (259)
484 PRK10790 putative multidrug tr 100.0 1.6E-33 3.6E-38 351.5 22.9 210 815-1054 339-558 (592)
485 cd03297 ABC_ModC_molybdenum_tr 100.0 3.2E-33 7E-38 303.5 22.2 192 153-390 16-214 (214)
486 PRK14265 phosphate ABC transpo 100.0 4.7E-33 1E-37 312.9 24.2 228 91-396 10-257 (274)
487 PRK14255 phosphate ABC transpo 100.0 9.6E-33 2.1E-37 307.6 26.4 210 148-395 18-234 (252)
488 TIGR03269 met_CoM_red_A2 methy 100.0 2.6E-33 5.7E-38 343.9 23.9 205 840-1054 11-253 (520)
489 cd03217 ABC_FeS_Assembly ABC-t 100.0 2.3E-33 5E-38 300.9 20.4 173 841-1054 12-189 (200)
490 PRK14271 phosphate ABC transpo 100.0 5.2E-33 1.1E-37 312.7 24.2 211 148-396 34-250 (276)
491 TIGR02324 CP_lyasePhnL phospho 100.0 2.9E-33 6.2E-38 306.2 21.4 191 842-1043 21-223 (224)
492 PRK11160 cysteine/glutathione 100.0 1.1E-33 2.4E-38 350.5 20.5 212 815-1054 337-557 (574)
493 PRK14236 phosphate transporter 100.0 9.8E-33 2.1E-37 310.4 26.2 209 149-395 39-254 (272)
494 cd03213 ABCG_EPDR ABCG transpo 100.0 6.4E-33 1.4E-37 295.9 23.3 170 148-390 22-194 (194)
495 COG3845 ABC-type uncharacteriz 100.0 3.8E-33 8.3E-38 316.0 22.7 247 834-1089 9-262 (501)
496 PRK03695 vitamin B12-transport 100.0 3.8E-33 8.3E-38 309.4 22.4 200 150-395 11-220 (248)
497 COG4987 CydC ABC-type transpor 100.0 3E-34 6.4E-39 326.9 13.7 212 816-1055 336-557 (573)
498 PRK14272 phosphate ABC transpo 100.0 6.4E-33 1.4E-37 309.1 24.2 208 148-396 17-235 (252)
499 PRK14261 phosphate ABC transpo 100.0 5.6E-33 1.2E-37 309.5 23.6 211 148-396 19-236 (253)
500 PRK14263 phosphate ABC transpo 100.0 4.9E-33 1.1E-37 310.6 23.0 209 148-396 21-244 (261)
No 1
>KOG0065 consensus Pleiotropic drug resistance proteins (PDR1-15), ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=1.6e-214 Score=1945.70 Aligned_cols=1120 Identities=53% Similarity=0.884 Sum_probs=1045.5
Q ss_pred cchHHhhhHHHHhcCCChhhhhhcccccc-CCCeeeeeccccChHhhHHHHHHHhhcccCChHHHHHHHHHHHHhcCCCC
Q 000997 19 VEDEEALRWAALERLPTYARARRGIFKNV-VGDVKEVDVSELAVQEQRLVLDRLVNAVEDDPERFFDRMRKRCEAVDLEL 97 (1194)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (1194)
+||||+|+|||+|||||++| +++.+. ++ ++|+.++++.+++.+.++..+..++|+|+++.++++|++++ ++
T Consensus 12 ~~~e~~~~~a~~~~~pt~~~---~~~~~~~~~---~~d~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~~r~~~~~~--~~ 83 (1391)
T KOG0065|consen 12 DEDEEALRWAAIERLPTFDR---SLLRSIFES---EVDVTKLDPDDDPKFIEKSSKHWEQDNEKLLEKLRERIDRV--EL 83 (1391)
T ss_pred chhHHHHHHHHHhcCccccc---hhhhhhccC---cccccCCCcccchhHHHHhHHHHhhhHHHHHHHHHhhcCcc--cC
Confidence 44999999999999999999 555432 22 79999999999999999999999999999999999999988 89
Q ss_pred CCceEEEeeeEEEEEEecCCCCCCChhHHHHHHHHHHHHHHhHhcCCCcceeeeecceEeEeCCeEEEEEcCCCCcHHHH
Q 000997 98 PKIEVRFQNLTVESFVHLGSRALPTIPNFIFNMTEALLRQLRIYRGNRSKLTILDDLSGIIRPSRLTLLLGPPSSGKTTL 177 (1194)
Q Consensus 98 p~~~v~~~~l~v~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTL 177 (1194)
|.++++++++.++++++.| ||+.|...+..+.+++..+.. ++.+.+||+|+||.++||+|++++||||||||||
T Consensus 84 p~~~~~~~~~gv~a~~~~~----~t~~n~~~~~~~~~~~~~~~~--~~~~~~il~~~sg~~~pg~m~lvLG~pgsG~ttl 157 (1391)
T KOG0065|consen 84 PTIEVRFSALGVEADVTYG----PTLVNILSNPLESILRMLGKR--KKKKIQILKDISGIIKPGEMTLVLGPPGSGKTTL 157 (1391)
T ss_pred CceEEEeeecccccccccc----hhhhhhhhhHHHHHhhhcccc--ccccceeecCcceeEcCCceEEEecCCCCchHHH
Confidence 9999999999999999876 999999999998877665543 4566789999999999999999999999999999
Q ss_pred HHHHhcCcCCCCceeeEEEECCccCCCCCCCceEEEEecCCCCCCCCCHHHHHHHhhhccCCCCchhhhHHHHHHHHHhC
Q 000997 178 LLALAGRLGHHLQVSGKITYNGHGFKEFVPPRTSAYVSQQDWQVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAG 257 (1194)
Q Consensus 178 L~~L~G~l~~~~~~~G~i~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~ 257 (1194)
|++|+|.++......|+|+|||++.+++.+++.++|++|+|+|+|+|||||||+|+++|++++.|++ +..|+|+..
T Consensus 158 lkal~g~~~~~~~~~~~isy~G~~~~e~~~~~~~aY~~e~DvH~p~lTVreTldFa~rck~~~~r~~---~~~R~e~~~- 233 (1391)
T KOG0065|consen 158 LKALAGKLDNFLKSSGEITYNGHDLKEFVPKKTVAYNSEQDVHFPELTVRETLDFAARCKGPGSRYD---EVSRREKLA- 233 (1391)
T ss_pred HHHHhCCCcccccCCCceeECCCcccccccCceEEeccccccccceeEEeehhhHHHhccCCccccc---cccHHHHHH-
Confidence 9999999988878889999999999999999999999999999999999999999999999999988 455665532
Q ss_pred CCCCchHHHHHHHhhccCcchhHHHHHHHHHhCCcccccccccCccCCCCChhhhhHHHHHHHHhCCCcEeEEecCCCCC
Q 000997 258 IKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGL 337 (1194)
Q Consensus 258 ~~~~~d~~~~~k~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~LSGGqkqRvsia~al~~~~~vlllDEptsgL 337 (1194)
..+|++++++||++|+||+|||+++||+||||||||+||++++++++++||||+|+||
T Consensus 234 ----------------------~~~d~~lkilGL~~~~dT~VGnd~~RGvSGGerKRvsi~E~~v~~~~~~~~De~t~GL 291 (1391)
T KOG0065|consen 234 ----------------------AMTDYLLKILGLDHCADTLVGNDMVRGVSGGERKRVSIGEMLVGPASILFWDEITRGL 291 (1391)
T ss_pred ----------------------HHHHHHHHHhCchhhccceecccccccccCcccceeeeeeeeecCcceeeeecccccc
Confidence 2589999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEcCCeEEEecChhhHHHHHHhcCCCCCCCCChhHHHH
Q 000997 338 DSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEGQIVYQGPRVSVLDFFASMGFSCPKRKNVADFLQ 417 (1194)
Q Consensus 338 D~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~~G~iv~~G~~~~~~~~F~~~G~~cp~~~~~adfl~ 417 (1194)
|++|+.+++++||+++|..+.|.+++++||+++++++||+|++|++|+++|+||++++++||+++||.||+++++|||++
T Consensus 292 DSsTal~iik~lr~~a~~~~~t~~vsi~Q~s~~~~~lFD~v~lL~eG~~iy~Gp~d~~~~yFe~~Gf~cP~r~~~ADfLt 371 (1391)
T KOG0065|consen 292 DSSTAFQIIKALRQLAHITGATALVSILQPSPEIYDLFDDVILLSEGYQIYQGPRDEVLPYFEDMGFKCPPRKGTADFLT 371 (1391)
T ss_pred cHHHHHHHHHHHHHHHhhhcceEEEEeccCChHHHHhhhheeeeeccceEEeccHHHHHHHHHhcCccCCCccCHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcCcccccccccCCCCCCcCCChhHHHHHHHhchhccchHHhhcCCccccCCCcCcccCCCCCCcHHHHHHHHHHHHHH
Q 000997 418 EVTSKKDQEQYWSNPYLPYRYISPGKFAEAFHSYHTGKNLSEELAVPFDRRFNHPAALSTSKYGEKRSELLKTSFNWQLL 497 (1194)
Q Consensus 418 ~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~R~~~ 497 (1194)
++++++++.++|.....|+.+.++++|.+.|..++.++++..+++.++++.+.++.++..++|.++.|+|++.|+.|+++
T Consensus 372 ~vts~k~~~~~~~~~~~~~~~~~~~ef~~~~~~s~~~~~l~~~l~~~~~~~k~~~~al~s~~y~v~~~~qvk~c~~R~f~ 451 (1391)
T KOG0065|consen 372 EVTSKKDQEQYWNKRSKPYPYTSVSEFAEYFLNSEDYAKLKKELSKPYDKSKKHKAALVSSKYSVPYWEQVKACTIREFL 451 (1391)
T ss_pred HhhcCccccccccccCCCcccCCHHHHHHHHhcchhhHHHHHHhcchhhhhhccchhhcCCceeccHHHHHHHHHHHHHH
Confidence 99999999999999989999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhcchhHHHHHHHHHHHHHHHHHHHHcccCCCCCccCcchhHHHHHHHHHHHHHHHHHHHHHHHHhcchhhhhhccccc
Q 000997 498 LMKRNSFIYVFKFIQLLIVALITMTVFFRTTMHHKTIDDGGLYLGALYFSMVIILFNGFTEVSMLVAKLPVLYKHRDLHF 577 (1194)
Q Consensus 498 ~~~r~~~~~~~~~~~~~~~ali~g~vf~~~~~~~~~~~~~~~~~g~lf~~l~~~~~~~~~~~~~~~~~~~v~~k~r~~~~ 577 (1194)
+++||.+++++++++.+++|+++|++|+++.+ .+..++..+.|++||++++.+|++++++.++++++||++|||+..|
T Consensus 452 l~k~n~~~~~~~~~~~~i~ali~gslF~~~~~--~t~~~~~~~~~~lffsll~~~f~~laEi~~~~~~~pv~~Khr~~~f 529 (1391)
T KOG0065|consen 452 LMKRNYFYYVFKTVQLVIQALITGSLFYRTPM--STTSGGYSRGGALFFALLFNLFNGLAEIALTFQRLPVFYKHRDLSF 529 (1391)
T ss_pred HHhCCceEEEhHHHHHHHHHHHHhhheeeccC--cccccchhhhhHHHHHHHHHHHHhHHHHHHHHhhcchHHHhhcccc
Confidence 99999999999999999999999999999985 5556778889999999999999999999999999999999999999
Q ss_pred cchhhHHHHHHHHHhhHHHHhhhHhhheeeeeccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccChHHHHHHHHHH
Q 000997 578 YPSWVYTIPSWALSIPTSLIESGFWVAVTYYVIGYDPNVVRFSRQLLLYFFLHQMSIGLFRVIGSLGRNMIVANTFGSFA 657 (1194)
Q Consensus 578 y~~~ay~l~~~~~~iP~~~i~~~i~~~i~Y~~~gl~~~~~~f~~~~l~~~~~~~~~~~l~~~i~~~~~~~~va~~~~~~~ 657 (1194)
|++|+++++.+++++|+.++++++|.+|+||++|+.+++++||++++++++.+++++++||+++++++++.+|+++|++.
T Consensus 530 Y~p~A~al~s~l~~~P~~~i~~~vf~iI~Yfl~gl~~~A~rFF~~fL~lf~~~~~~s~lFr~ia~l~~t~~~An~~g~~~ 609 (1391)
T KOG0065|consen 530 YPPWAEALASTLLKIPSSFIESVVFVIITYFLIGLKRNAGRFFIQFLFLFLCQFCMSGLFRFIASLSRTLSIANLIGGIL 609 (1391)
T ss_pred cChHHHHHHHHHHhCcHHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHhhHhHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhccccCCCcchhHHHHHhhcHHHHHHHHHHHhhhcCCcccccCC------------C---CCCchhHHHhhh
Q 000997 658 MLVVMALGGFIISRDSIPKWWIWGFWVSPLMYAQNAASVNEFLGHSWDKKAG------------N---SNFSLGEAILRQ 722 (1194)
Q Consensus 658 ~l~~~l~~Gf~i~~~~ip~~~~w~~~isp~~y~~~al~~nef~~~~~~~~~~------------~---~~~~~g~~~l~~ 722 (1194)
++++.+++||+|+..+||+||+|++|++|++|+++++++|||++.+|.|.+. . ...+.|..+++.
T Consensus 610 ~L~i~m~~Gf~Ip~~~m~~W~~Wi~yinPl~Y~fesl~~NEF~~~~~~c~p~gp~y~n~~~~~~~c~~~~~~~G~~~v~g 689 (1391)
T KOG0065|consen 610 LLVLFMYGGFVIPKKDMPPWFRWIAYINPLMYAFESLMSNEFHGRRWPCSPSGPAYDNISIENKVCAATGATLGNDYVSG 689 (1391)
T ss_pred HHHHHHHcceeeeccccchHHHHHHHHCHHHHHHHHHHHhhhhcccCCCCCCCCcccccccccccchhhccccCceEEec
Confidence 9999999999999999999999999999999999999999999999999721 1 135678889988
Q ss_pred cCCC-----CCCccHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccceechhhhhhHhhhh-cCcchhHHhhhhhhccc
Q 000997 723 RSLF-----PESYWYWIGVGAMLGYTLLFNALFTFFLSYLNPLGKQQAVVSKKELQERDRRR-KGENVVIELREYLQRSS 796 (1194)
Q Consensus 723 ~~~~-----~~~~~~w~~~g~ll~~~~~f~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 796 (1194)
+++. +..+|+|+++|+++||.++|+++..+++.|+++..+.+..+..++...+.... .......+. ..
T Consensus 690 ~~~l~~~~~y~~~~~Wr~~gillgf~v~f~~~~~ia~~yl~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~------~~ 763 (1391)
T KOG0065|consen 690 RDYLKVQYQYEYKWYWRNFGILLGFTVFFNFVFLIALEYLKPLKKSGAILVFKKGKEKKKVKSAGSSSEIEK------LD 763 (1391)
T ss_pred ccccccccccccceeEeehhHHHHHHHHHHHHHHHHHHhcCccccccceeeeccchhhhcchhccccccccc------cc
Confidence 8887 78899999999999999999999999999999998888877654433221111 000000000 00
Q ss_pred CccCcccccCCcccccccceeEeecceeeeecccccccccccccceEEeeeeeEEEeCCcEEEEEccCCCChHHHHhhhc
Q 000997 797 SLNGKYFKQKGMVLPFQPLSMAFGNINYFVDVPVELKQEGVLEDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLA 876 (1194)
Q Consensus 797 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~ 876 (1194)
... ..+.++++.|+++..++++||.|.++++.+++.+| +++++|+|||+.++||.++||||+||||||||||+|+
T Consensus 764 ~s~--~~~~~~~~~~~~~~~~~~~~V~~w~dl~~~~~~qG---~~~qLL~~V~G~~kPG~LTALMG~SGAGKTTLLdvLA 838 (1391)
T KOG0065|consen 764 DSS--HQEKNKMVLPFTPLSLTFKDVFYWVDLPYEMPIQG---GTRQLLNNVSGAFKPGVLTALMGESGAGKTTLLDVLA 838 (1391)
T ss_pred ccc--ccccccccCCCccccccccceEEEEeCCccccccc---cceEhhhcCceEecCCceeehhcCCCCchHHHHHHHh
Confidence 000 11345778899999999999999999999998776 7889999999999999999999999999999999999
Q ss_pred CCCCCCeeEEEEEEcCccCChhcccceeeEeecCCCCCCCCcHHHHHHHHhhhcCCCcCcHHHHHHHHHHHHHHcCCCcc
Q 000997 877 GRKTGGIIEGDIYISGYPKRQETFARISGYCEQNDIHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSL 956 (1194)
Q Consensus 877 g~~~~~~~~G~i~i~g~~~~~~~~~~~~gyv~Q~~~~~~~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~ 956 (1194)
||+++|.++|+|.|||+|++++.|+|.+|||+|+|+|.+.+||||.|.|+|.||+|.+++.+++.+.||+|++.++|.++
T Consensus 839 ~R~t~G~I~Gdi~i~G~p~~q~tF~R~~GYvqQ~DiH~~~~TVrESL~fSA~LRlp~~v~~~ek~~yVe~Vi~lleL~~~ 918 (1391)
T KOG0065|consen 839 GRKTGGYIEGDILISGFPKDQETFARVSGYVEQQDIHSPELTVRESLRFSAALRLPKEVSDEEKYEYVEEVIELLELKEY 918 (1391)
T ss_pred cCcccceEEeEEEECCeeCchhhhccccceeecccccCcccchHHHHHHHHHHcCCCcCCHHHHHHHHHHHHHHhCchhh
Confidence 99999999999999999999899999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCcccCCCCCCCCHHHHHHHHHHHHHhhCC-CEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHh
Q 000997 957 SGALIGLPGINGLSTEQRKRLTIAVELVANP-SIVFMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFES 1035 (1194)
Q Consensus 957 ~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p-~illLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~ 1035 (1194)
+|.++|.|| +|||++|||||+||+||++|| .||||||||||||++++..|++++|+++++|+|||||+||||.++|+.
T Consensus 919 ~daiVG~~G-~GLs~eQRKrLTIgVELvA~P~~ilFLDEPTSGLDsqaA~~i~~~lrkla~tGqtIlCTIHQPS~~ife~ 997 (1391)
T KOG0065|consen 919 ADALVGLPG-SGLSTEQRKRLTIGVELVANPSSILFLDEPTSGLDSQAAAIVMRFLRKLADTGQTILCTIHQPSIDIFEA 997 (1391)
T ss_pred hhhhccCCC-CCCCHHHhceeeEEEEEecCCceeEEecCCCCCccHHHHHHHHHHHHHHHhcCCeEEEEecCCcHHHHHH
Confidence 999999999 999999999999999999999 899999999999999999999999999999999999999999999999
Q ss_pred cCeEEEEccCcEEEEeCCCCCchhHHHHHHHhcCCCCCCCCCCCccccchhccCccccccccCcHHHHHhhcHHHHHHHH
Q 000997 1036 FDELLFMKRGGELIYAGPLGSKSCELIKYFEAVEGVPKIRPGYNPAAWMLEVTSPVEESRLGVDFAEIYRRSNLFQRNRE 1115 (1194)
Q Consensus 1036 ~d~~~~l~~gG~~~~~g~~~~~~~~~~~~f~~~~g~~~~~~~~npa~~~l~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~ 1115 (1194)
||++++|++||++||+||+|++++.+++||++++|+ +||+..|||||||||++.+.+...+.||++.|++|++++++++
T Consensus 998 FD~LLLLkrGGqtVY~G~lG~~s~~li~YFes~~~~-~~~~~~NPA~~mLevi~~~~~~~~~~D~a~~w~~S~e~k~~~e 1076 (1391)
T KOG0065|consen 998 FDELLLLKRGGQTVYFGPLGENSSKLIEYFESIGGV-KCISDENPAEWMLEVIGAGAEASLSVDFAEIWKNSEEYKRNKE 1076 (1391)
T ss_pred HhHHHHHhcCCeEEEecCcccccHHHHHHHHhcCCc-cCCCCCChHHHHHhhcccccccccCccHHHHHhccHHHHHHHH
Confidence 999999999999999999999999999999999887 6887779999999999999888889999999999999999999
Q ss_pred HHHhhCCCCCC-CcCCCCCccccCCHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHhccCCCCccccccc
Q 000997 1116 LVESLSKPSPS-SKKLNFSTKYSQSFANQFLACLRKQNLSYWRNPQYTAVRFFYTVVISLMLGSICWKFGAKRFAIKVF 1193 (1194)
Q Consensus 1116 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~q~~~l~~r~~~~~~R~~~~~~~r~~~~~~~~l~~g~~f~~~~~~~~~~~~~ 1193 (1194)
++++++.++++ ..+..++++|++|+|.|++.|+||++++|||+|.|+++|++++++.||++|++||++|++..++|+.
T Consensus 1077 ~v~~l~~~~~~~~~~~~~~~~fa~s~~~Q~k~~l~Rq~~syWRsp~y~~ar~~~~i~~gl~iGf~F~~~g~~~q~lqn~ 1155 (1391)
T KOG0065|consen 1077 LVKELSQPPPGFSTDLEFKTRFAQSLWYQFKLCLWRQFLSYWRSPDYLMARFALTIVAGLFIGFTFWKVGHNVQGLQNA 1155 (1391)
T ss_pred HHHHHhcCCccCCcccccccccchhHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHhheeeeeecCCcHHHHHHH
Confidence 99999999888 7888889999999999999999999999999999999999999999999999999999999998874
No 2
>PLN03140 ABC transporter G family member; Provisional
Probab=100.00 E-value=5e-194 Score=1895.45 Aligned_cols=1186 Identities=60% Similarity=1.018 Sum_probs=1051.6
Q ss_pred ccccccCC-CCC---CCcchHHhhhHHHHhcCCChhhhhhcccccc-----CCC---eeeeeccccChHhhHHHHHHHhh
Q 000997 6 ENVFSRTS-SFR---DEVEDEEALRWAALERLPTYARARRGIFKNV-----VGD---VKEVDVSELAVQEQRLVLDRLVN 73 (1194)
Q Consensus 6 ~~~~~~~~-~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~---~~~~~~~~~~~~~~~~~~~~~~~ 73 (1194)
+++|++.+ +.+ ..|||||+|+|||+||||||+|+|++++... .|+ .+++|+++|+.++++.++++|++
T Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 103 (1470)
T PLN03140 24 EDVFSGGSQSRRRTSSVDEDEEALKWAAIEKLPTYSRLRTSIMKSFVENDVYGNQLLHKEVDVTKLDGNDRQKFIDMVFK 103 (1470)
T ss_pred hhhhhccchhccccccccCChHhhhhHHhhhCCchhhhhhhhhhcccccccccccccccccccccCChHHHHHHHHhhhc
Confidence 68886643 212 3678999999999999999999999999653 122 23699999999999999999999
Q ss_pred cccCChHHHHHHHHHHHHhcCCCCCCceEEEeeeEEEEEEecCCCCCCChhHHHHHHHHHHHHHHhHhcCCCcceeeeec
Q 000997 74 AVEDDPERFFDRMRKRCEAVDLELPKIEVRFQNLTVESFVHLGSRALPTIPNFIFNMTEALLRQLRIYRGNRSKLTILDD 153 (1194)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~v~~~~l~v~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~ 153 (1194)
++++|+++|++++++|.+++|+++|++||||+||+|++++.++++.+||++|.+.++++.+...++....++.+++||+|
T Consensus 104 ~~~~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~v~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~k~~~~~IL~~ 183 (1470)
T PLN03140 104 VAEEDNEKFLKKFRNRIDRVGIKLPTVEVRFEHLTVEADCYIGSRALPTLPNAARNIAESALGMLGINLAKKTKLTILKD 183 (1470)
T ss_pred ccchhHHHHHHHHHhhhccccCCCCCCeeEEeCCEEEEEecCCcccCCcHHHHHHHHHHHHHHHhccccCCCccceeccC
Confidence 99999999999999999999999999999999999999999999999999999999888766544432334456889999
Q ss_pred ceEeEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCceeeEEEECCccCCCCCCCceEEEEecCCCCCCCCCHHHHHHHh
Q 000997 154 LSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVPPRTSAYVSQQDWQVAEMTVRETLDFA 233 (1194)
Q Consensus 154 vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lTV~E~l~f~ 233 (1194)
|||.++|||+++|+|||||||||||++|+|++++...++|+|+|||+++++..+++.++||+|+|.|++++||+|||.|+
T Consensus 184 vs~~i~~Ge~~~llGpnGSGKSTLLk~LaG~l~~~~~~~G~I~~nG~~~~~~~~~~~i~yv~Q~d~~~~~lTV~EtL~f~ 263 (1470)
T PLN03140 184 ASGIIKPSRMTLLLGPPSSGKTTLLLALAGKLDPSLKVSGEITYNGYRLNEFVPRKTSAYISQNDVHVGVMTVKETLDFS 263 (1470)
T ss_pred CeEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCcceeEEEECCEechhhcccceeEEecccccCCCcCcHHHHHHHH
Confidence 99999999999999999999999999999999887678999999999987776778899999999999999999999999
Q ss_pred hhccCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhccCcchhHHHHHHHHHhCCcccccccccCccCCCCChhhhh
Q 000997 234 GQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEMLKGISGGQKK 313 (1194)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~k~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~LSGGqkq 313 (1194)
++|++.+.++++..+..++++..++.|+.+++.+||+....+.+.+..++.+|+.+||++|+||.||++++++|||||||
T Consensus 264 a~~~~~~~~~~~~~~~~~~ek~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~L~~lGL~~~~~t~vg~~~~rglSGGerk 343 (1470)
T PLN03140 264 ARCQGVGTRYDLLSELARREKDAGIFPEAEVDLFMKATAMEGVKSSLITDYTLKILGLDICKDTIVGDEMIRGISGGQKK 343 (1470)
T ss_pred HHhcCCCCcccchhhcCHHHHhccCCCchhhHHHHHHhhhhcchhhHHHHHHHHHcCCccccCceeCCccccCCCcccce
Confidence 99988777666655666777777778888899999998888887788899999999999999999999999999999999
Q ss_pred HHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEcCCeEEEecChh
Q 000997 314 RLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEGQIVYQGPRV 393 (1194)
Q Consensus 314 Rvsia~al~~~~~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~~G~iv~~G~~~ 393 (1194)
||+||++|+++|+++||||||+|||+.++.++++.|+++++..+.|+|+++|||.++++++||+|++|++|+++|+||++
T Consensus 344 RVsia~aL~~~p~vlllDEPTsGLDs~t~~~i~~~Lr~la~~~g~Tviis~Hqp~~~i~~lfD~vilL~~G~ivy~G~~~ 423 (1470)
T PLN03140 344 RVTTGEMIVGPTKTLFMDEISTGLDSSTTYQIVKCLQQIVHLTEATVLMSLLQPAPETFDLFDDIILLSEGQIVYQGPRD 423 (1470)
T ss_pred eeeehhhhcCCCcEEEEeCCCcCccHHHHHHHHHHHHHHHHhcCCEEEEEecCCCHHHHHHhheEEEeeCceEEEeCCHH
Confidence 99999999999999999999999999999999999999987667899999999999999999999999999999999999
Q ss_pred hHHHHHHhcCCCCCCCCChhHHHHhhcCcccccccccCCCCCCcCCChhHHHHHHHhchhccchHHhhcCCccccCCCcC
Q 000997 394 SVLDFFASMGFSCPKRKNVADFLQEVTSKKDQEQYWSNPYLPYRYISPGKFAEAFHSYHTGKNLSEELAVPFDRRFNHPA 473 (1194)
Q Consensus 394 ~~~~~F~~~G~~cp~~~~~adfl~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 473 (1194)
++.+||+++||+||+++|+|||+++++++++++++|.....|++++++++|+++|++++.++.+.++++.+.++...++.
T Consensus 424 ~~~~yF~~lGf~cP~~~n~ADFl~~v~s~~~~~~~~~~~~~p~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~ 503 (1470)
T PLN03140 424 HILEFFESCGFKCPERKGTADFLQEVTSKKDQEQYWADRNKPYRYISVSEFAERFKSFHVGMQLENELSVPFDKSQSHKA 503 (1470)
T ss_pred HHHHHHHHcCCCCCCCCChHHHHHHhcCchhhhhhhhccCCccccCCHHHHHHHHHhcHHHHHHHHHHhhhhhhhhcccc
Confidence 99999999999999999999999999999888788876667878889999999999999988888887777665555666
Q ss_pred cccCCCCCCcHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHcccCCCCCccCcchhHHHHHHHHHHHHHH
Q 000997 474 ALSTSKYGEKRSELLKTSFNWQLLLMKRNSFIYVFKFIQLLIVALITMTVFFRTTMHHKTIDDGGLYLGALYFSMVIILF 553 (1194)
Q Consensus 474 ~~~~~~~~~s~~~~~~~~~~R~~~~~~r~~~~~~~~~~~~~~~ali~g~vf~~~~~~~~~~~~~~~~~g~lf~~l~~~~~ 553 (1194)
....++|..++++|++.|++|++++++||+..+++++++.+++|+++|++||+++++..+..++..+.|++||++++.++
T Consensus 504 ~~~~~~y~~s~~~q~~~~~~R~~~~~~Rd~~~~~~r~~~~ii~ali~GsvF~~~~~~~~~~~~~~~~~g~lff~~l~~~~ 583 (1470)
T PLN03140 504 ALVFSKYSVPKMELLKACWDKEWLLMKRNAFVYVFKTVQIIIVAAIASTVFLRTEMHTRNEEDGALYIGALLFSMIINMF 583 (1470)
T ss_pred cccCCCCcCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcchhHHHHHHHHHHHHHHHHH
Confidence 66667899999999999999999999999999999999999999999999999987765556677889999999999999
Q ss_pred HHHHHHHHHHhcchhhhhhccccccchhhHHHHHHHHHhhHHHHhhhHhhheeeeeccccccHHHHHHHHHHHHHHHHHH
Q 000997 554 NGFTEVSMLVAKLPVLYKHRDLHFYPSWVYTIPSWALSIPTSLIESGFWVAVTYYVIGYDPNVVRFSRQLLLYFFLHQMS 633 (1194)
Q Consensus 554 ~~~~~~~~~~~~~~v~~k~r~~~~y~~~ay~l~~~~~~iP~~~i~~~i~~~i~Y~~~gl~~~~~~f~~~~l~~~~~~~~~ 633 (1194)
++++++..++.++|||+|||+..||++|+|++++++.++|+.++++++|++|+|||+|+.+++.+||.++++++++++++
T Consensus 584 ~~~~~l~~~~~~r~vf~ker~~~~Y~~~ay~la~~l~~iP~~~i~~~if~~I~Y~m~Gl~~~~~~Ff~f~l~~~l~~~~~ 663 (1470)
T PLN03140 584 NGFAELALMIQRLPVFYKQRDLLFHPPWTFTLPTFLLGIPISIIESVVWVVITYYSIGFAPEASRFFKQLLLVFLIQQMA 663 (1470)
T ss_pred HHHHHHHHHHhccchhHHhhhccCcCHHHHHHHHHHHHHHHHHHHHHHHHhHHhhhcCCCCchhHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcccChHHHHHHHHHHHHHHHHHhhccccCCCcchhHHHHHhhcHHHHHHHHHHHhhhcCCccccc-CCCCC
Q 000997 634 IGLFRVIGSLGRNMIVANTFGSFAMLVVMALGGFIISRDSIPKWWIWGFWVSPLMYAQNAASVNEFLGHSWDKK-AGNSN 712 (1194)
Q Consensus 634 ~~l~~~i~~~~~~~~va~~~~~~~~l~~~l~~Gf~i~~~~ip~~~~w~~~isp~~y~~~al~~nef~~~~~~~~-~~~~~ 712 (1194)
.++|++++++++++.+|+++++++++++++|+||+++++.||+||+|++|+||++|+++++++|||.+..|.+. +.+..
T Consensus 664 ~~l~~~i~a~~~~~~~A~~~~~~~~l~~~lf~Gf~i~~~~ip~w~~W~~yisp~~Ya~eal~~NEf~~~~~~~~~~~~~~ 743 (1470)
T PLN03140 664 AGIFRLIASVCRTMIIANTGGALVLLLVFLLGGFILPKGEIPNWWEWAYWVSPLSYGFNALAVNEMFAPRWMNKMASDNS 743 (1470)
T ss_pred HHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHccceechHhCchHHHHHHHhCHHHHHHHHHHHHhccCccccCcccCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999888643 22335
Q ss_pred CchhHHHhhhcCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccceechhhhhhHhhhhcC-------cch-
Q 000997 713 FSLGEAILRQRSLFPESYWYWIGVGAMLGYTLLFNALFTFFLSYLNPLGKQQAVVSKKELQERDRRRKG-------ENV- 784 (1194)
Q Consensus 713 ~~~g~~~l~~~~~~~~~~~~w~~~g~ll~~~~~f~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~- 784 (1194)
...|+.+|+.+++...+.|+|++++++++|+++|+++++++++|.++.......+.++........... +..
T Consensus 744 ~~~G~~~L~~~g~~~~~~~~w~~~~iL~~~~v~f~~l~~l~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 823 (1470)
T PLN03140 744 TRLGTAVLNIFDVFTDKNWYWIGVGALLGFTILFNVLFTLALTYLNPLGKKQAIISEETAEEMEGEEDSIPRSLSSADGN 823 (1470)
T ss_pred cccHHHHHHhcCcCccccchhhhHHHHHHHHHHHHHHHHHHHHhcCccCCCCccccccchhhhhcccccccccccccccc
Confidence 678999999999999889999999999999999999999999999876655544332211100000000 000
Q ss_pred h---HHh--hhhhhc-----ccC--ccCcccccCCcccccccceeEeecceeeeecccccccccccccceEEeeeeeEEE
Q 000997 785 V---IEL--REYLQR-----SSS--LNGKYFKQKGMVLPFQPLSMAFGNINYFVDVPVELKQEGVLEDRLQLLVNVTGAF 852 (1194)
Q Consensus 785 ~---~~~--~~~~~~-----~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i 852 (1194)
. ... +..... ... ......+.+++.+|+.|.+++|+|++|.++.+.+.++.+...+++++|+|||+++
T Consensus 824 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~y~v~~~~~~~~~~~~~~~~~iL~~vs~~i 903 (1470)
T PLN03140 824 NTREVAIQRMSNPEGLSKNRDSSLEAANGVAPKRGMVLPFTPLAMSFDDVNYFVDMPAEMKEQGVTEDRLQLLREVTGAF 903 (1470)
T ss_pred ccccccccccccccccccccccccccccccccccccccCCCcceEEEEEEEEEEccCccccccccCcCCceEeeCcEEEE
Confidence 0 000 000000 000 0000123456678899999999999999998877766666566778999999999
Q ss_pred eCCcEEEEEccCCCChHHHHhhhcCCCCCCeeEEEEEEcCccCChhcccceeeEeecCCCCCCCCcHHHHHHHHhhhcCC
Q 000997 853 RPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQETFARISGYCEQNDIHSPGLTVLESLLFSAWLRLP 932 (1194)
Q Consensus 853 ~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~~~~~~~gyv~Q~~~~~~~lTv~e~l~f~~~lr~~ 932 (1194)
+||+++||||||||||||||++|+|+.++|..+|+|.+||.+.....+++.+|||+|+|.+++.+||+|+|.|++.+|.+
T Consensus 904 ~~Gel~aL~G~sGaGKTTLL~~LaG~~~~g~~~G~I~inG~~~~~~~~~~~igyv~Q~d~~~~~lTV~E~L~~~a~lr~~ 983 (1470)
T PLN03140 904 RPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPKKQETFARISGYCEQNDIHSPQVTVRESLIYSAFLRLP 983 (1470)
T ss_pred ECCeEEEEECCCCCCHHHHHHHHcCCCCCCcccceEEECCccCChHHhhhheEEEccccccCCCCcHHHHHHHHHHhCCC
Confidence 99999999999999999999999999876678999999999876556678899999999999999999999999988877
Q ss_pred CcCcHHHHHHHHHHHHHHcCCCcccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHH
Q 000997 933 SEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSGLDARAAAIVMRTVR 1012 (1194)
Q Consensus 933 ~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~ 1012 (1194)
...+.+++.+.++++++.++|.+++|+.+|.+++++|||||||||+||++|+.+|+||||||||||||+.++..+++.|+
T Consensus 984 ~~~~~~~~~~~v~~vl~~lgL~~~~~~~vg~~~~~~LSgGerkRvsIa~aL~~~P~lL~LDEPTsgLD~~~a~~v~~~L~ 1063 (1470)
T PLN03140 984 KEVSKEEKMMFVDEVMELVELDNLKDAIVGLPGVTGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVR 1063 (1470)
T ss_pred CCCCHHHHHHHHHHHHHHCCChhHhCCccCCCCCCCcCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHH
Confidence 66666667788999999999999999999988778999999999999999999999999999999999999999999999
Q ss_pred HHHhCCCEEEEEecCCcHHHHHhcCeEEEEccCcEEEEeCCCCCchhHHHHHHHhcCCCCCCCCCCCccccchhccCccc
Q 000997 1013 NIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLGSKSCELIKYFEAVEGVPKIRPGYNPAAWMLEVTSPVE 1092 (1194)
Q Consensus 1013 ~l~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~~~~~~~~~~~f~~~~g~~~~~~~~npa~~~l~~~~~~~ 1092 (1194)
+++++|+|||||+|||+.++++.||++++|++||+++|+||.+++++++++||++++|+++||+++||||||||+++...
T Consensus 1064 ~l~~~g~tVI~t~Hq~~~~i~~~~D~vllL~~gG~~v~~G~~~~~~~~~~~yF~~~~g~~~~p~~~NPAd~~l~v~~~~~ 1143 (1470)
T PLN03140 1064 NTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRGGQVIYSGPLGRNSHKIIEYFEAIPGVPKIKEKYNPATWMLEVSSLAA 1143 (1470)
T ss_pred HHHHCCCEEEEEeCCCCHHHHHhCCEEEEEcCCCEEEEECCcccccccHHHHHHhcCCCCCCCCCCCchhhhhhhhcccc
Confidence 99988999999999999778899999999998899999999998889999999999888789999999999999998766
Q ss_pred cccccCcHHHHHhhcHHHHHHHHHHHhhCCCCCCCcCCCCCccccCCHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHH
Q 000997 1093 ESRLGVDFAEIYRRSNLFQRNRELVESLSKPSPSSKKLNFSTKYSQSFANQFLACLRKQNLSYWRNPQYTAVRFFYTVVI 1172 (1194)
Q Consensus 1093 ~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~l~~r~~~~~~R~~~~~~~r~~~~~~~ 1172 (1194)
+...+.||++.|++|++++++++.++++..+.++..+..++++|++|+++|+++|+||+++++||||.|+++|+++++++
T Consensus 1144 ~~~~~~d~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~Q~~~l~~R~~~~~~R~p~~~~~r~~~~i~~ 1223 (1470)
T PLN03140 1144 EVKLGIDFAEHYKSSSLYQRNKALVKELSTPPPGASDLYFATQYSQSTWGQFKSCLWKQWWTYWRSPDYNLVRFFFTLAA 1223 (1470)
T ss_pred cccccchHHHHHhccHHHHHHHHHHHHhccCCCCccccccCccccCCHHHHHHHHHHHHHHHHHCCHhHHHHHHHHHHHH
Confidence 66666799999999999999988888877766665566667889999999999999999999999999999999999999
Q ss_pred HHHHHHHhccCCCCccccc
Q 000997 1173 SLMLGSICWKFGAKRFAIK 1191 (1194)
Q Consensus 1173 ~l~~g~~f~~~~~~~~~~~ 1191 (1194)
||++|++||++|++.+++|
T Consensus 1224 al~~G~~f~~~~~~~~~~~ 1242 (1470)
T PLN03140 1224 ALMVGTIFWKVGTKRSNAN 1242 (1470)
T ss_pred HHHHHHHhhCCCCCcchhh
Confidence 9999999999999876655
No 3
>TIGR00956 3a01205 Pleiotropic Drug Resistance (PDR) Family protein.
Probab=100.00 E-value=2.2e-154 Score=1528.43 Aligned_cols=1072 Identities=32% Similarity=0.528 Sum_probs=872.1
Q ss_pred cCChHHHHHHHHHHHHhcCCCCC--CceEEEeeeEEEEEEecCCCCCCChhHHHHHHHHHHHHHHhHhcCCCcceeeeec
Q 000997 76 EDDPERFFDRMRKRCEAVDLELP--KIEVRFQNLTVESFVHLGSRALPTIPNFIFNMTEALLRQLRIYRGNRSKLTILDD 153 (1194)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~p--~~~v~~~~l~v~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~ 153 (1194)
+.|+++|++.++++.++.+...| +++|+|+||+|++ ...+...+||++|.+.+........+. ..+++.+++||+|
T Consensus 2 ~f~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~v~~-~~~~~~~~~t~~~~~~~~~~~~~~~~~-~~~~~~~~~iL~~ 79 (1394)
T TIGR00956 2 EFNAKAWVKNFRKLIDSDPIYYKPYKLGVAYKNLSAYG-VAADSDYQPTFPNALLKILTRGFRKLK-KFRDTKTFDILKP 79 (1394)
T ss_pred CCCHHHHHHHHHHHHhccccCCCCCeeeEEEECCEEEE-EeccccccCchHHHHHHHHHHHHHHhc-ccCCCCcceeeeC
Confidence 36778888776666666665555 9999999999999 444666789999998887664333221 1233456789999
Q ss_pred ceEeEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCC-CceeeEEEECCccCCCCC--CCceEEEEecCCCCCCCCCHHHHH
Q 000997 154 LSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHH-LQVSGKITYNGHGFKEFV--PPRTSAYVSQQDWQVAEMTVRETL 230 (1194)
Q Consensus 154 vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~-~~~~G~i~~~G~~~~~~~--~~~~~~yv~Q~d~~~~~lTV~E~l 230 (1194)
||+.++|||+++|+||||||||||||+|+|+..+. .+.+|+|.|||.++.+.. .++.++||+|+|.|++++||+|||
T Consensus 80 vs~~i~~Ge~~aIlG~nGsGKSTLLk~LaG~~~~~~~~~~G~I~~~G~~~~~~~~~~r~~i~yv~Q~d~~~~~lTV~E~l 159 (1394)
T TIGR00956 80 MDGLIKPGELTVVLGRPGSGCSTLLKTIASNTDGFHIGVEGVITYDGITPEEIKKHYRGDVVYNAETDVHFPHLTVGETL 159 (1394)
T ss_pred CEEEEECCEEEEEECCCCCCHHHHHHHHhCCCCCCCCCceeEEEECCEehHHHHhhcCceeEEeccccccCCCCCHHHHH
Confidence 99999999999999999999999999999987432 246999999998875432 345699999999999999999999
Q ss_pred HHhhhccCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhccCcchhHHHHHHHHHhCCcccccccccCccCCCCChh
Q 000997 231 DFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEMLKGISGG 310 (1194)
Q Consensus 231 ~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~k~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~LSGG 310 (1194)
.|+++++.+........ +.++ .+..++.+++.+||++++||.||++.+++||||
T Consensus 160 ~f~~~~~~~~~~~~~~~---~~~~-----------------------~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGG 213 (1394)
T TIGR00956 160 DFAARCKTPQNRPDGVS---REEY-----------------------AKHIADVYMATYGLSHTRNTKVGNDFVRGVSGG 213 (1394)
T ss_pred HHHHHhCCCCCCCCCCC---HHHH-----------------------HHHHHHHHHHHcCcccccCceeCCCcCCCCCcc
Confidence 99988764321110000 0000 012357789999999999999999999999999
Q ss_pred hhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEcCCeEEEec
Q 000997 311 QKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEGQIVYQG 390 (1194)
Q Consensus 311 qkqRvsia~al~~~~~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~~G~iv~~G 390 (1194)
|||||+||++|+.+|+|+||||||+|||+.++.++++.|+++++..+.|+|+++|||.++++++||+|++|++|+++|+|
T Consensus 214 erkRvsIA~aL~~~p~vlllDEPTsgLD~~~~~~i~~~L~~la~~~g~tvii~~Hq~~~~i~~l~D~v~~L~~G~iv~~G 293 (1394)
T TIGR00956 214 ERKRVSIAEASLGGAKIQCWDNATRGLDSATALEFIRALKTSANILDTTPLVAIYQCSQDAYELFDKVIVLYEGYQIYFG 293 (1394)
T ss_pred cchHHHHHHHHHhCCCEEEEeCCCCCcCHHHHHHHHHHHHHHHHhcCCEEEEEecCCCHHHHHhhceEEEEeCCeEEEEC
Confidence 99999999999999999999999999999999999999999987667888999999999999999999999999999999
Q ss_pred ChhhHHHHHHhcCCCCCCCCChhHHHHhhcCcccccccccCCCCCCcCCChhHHHHHHHhchhccchHHhhcCCcccc--
Q 000997 391 PRVSVLDFFASMGFSCPKRKNVADFLQEVTSKKDQEQYWSNPYLPYRYISPGKFAEAFHSYHTGKNLSEELAVPFDRR-- 468 (1194)
Q Consensus 391 ~~~~~~~~F~~~G~~cp~~~~~adfl~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 468 (1194)
+++++.+||+++||.||++.|+|||+++++++.++ +++.. .+.....++++++++|+.+..++++.++++.+.++.
T Consensus 294 ~~~~~~~yF~~lG~~~p~~~n~aDfl~~~~~~~~~-~~~~~-~e~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~ 371 (1394)
T TIGR00956 294 PADKAKQYFEKMGFKCPDRQTTADFLTSLTSPAER-QIKPG-YEKKVPRTPQEFETYWRNSPEYAQLMKEIDEYLDRCSE 371 (1394)
T ss_pred CHHHHHHHHHHcCCCCCCCCChHHHHHhccChhhh-hcccc-ccccCCCCHHHHHHHHHcCHHHHHHHHHHHHHhhhccc
Confidence 99999999999999999999999999999887543 22211 111123468899999999987776666554321110
Q ss_pred -------------CCCcCcccCCCCCCcHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHcccCCCCCccC
Q 000997 469 -------------FNHPAALSTSKYGEKRSELLKTSFNWQLLLMKRNSFIYVFKFIQLLIVALITMTVFFRTTMHHKTID 535 (1194)
Q Consensus 469 -------------~~~~~~~~~~~~~~s~~~~~~~~~~R~~~~~~r~~~~~~~~~~~~~~~ali~g~vf~~~~~~~~~~~ 535 (1194)
...+.....++|..+++.|+..|++|+++.++||+..++.++++.+++|+++|++||+++.+. .
T Consensus 372 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~Q~~~l~~R~~~~~~Rd~~~~~~r~~~~ii~~li~G~~F~~~~~~~---~ 448 (1394)
T TIGR00956 372 SDTKEAYRESHVAKQSKRTRPSSPYTVSFSMQVKYCLARNFLRMKGNPSFTLFMVFGNIIMALILSSVFYNLPKNT---S 448 (1394)
T ss_pred hhhHHHHHHHHHhhhcccccCCCCCcCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHhhcCCCCCc---h
Confidence 001112234568899999999999999999999999999999999999999999999987543 2
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHhcchhhhhhccccccchhhHHHHHHHHHhhHHHHhhhHhhheeeeecccccc
Q 000997 536 DGGLYLGALYFSMVIILFNGFTEVSMLVAKLPVLYKHRDLHFYPSWVYTIPSWALSIPTSLIESGFWVAVTYYVIGYDPN 615 (1194)
Q Consensus 536 ~~~~~~g~lf~~l~~~~~~~~~~~~~~~~~~~v~~k~r~~~~y~~~ay~l~~~~~~iP~~~i~~~i~~~i~Y~~~gl~~~ 615 (1194)
+.....|++||++++.++.++.++..++.+||||+|||..++|++++|++++++.++|+.++.+++|++++|||+|+.++
T Consensus 449 ~~~~r~g~lf~~~~~~~~~~~~~i~~~~~eR~i~~re~~~~~Y~~~ay~la~~l~~iP~~~~~~~if~~i~Yfm~gl~~~ 528 (1394)
T TIGR00956 449 DFYSRGGALFFAILFNAFSSLLEIASMYEARPIVEKHRKYALYHPSADAIASIISEIPFKIIESVVFNIILYFMVNFRRT 528 (1394)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcceeeeccccccCHHHHHHHHHHHHHHHHHHHHHHHHhhhEEcCCCccc
Confidence 44567899999999999999999998899999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcccChHHHHHHHHHHHHHHHHHhhccccCCCcchhHHHHHhhcHHHHHHHHHH
Q 000997 616 VVRFSRQLLLYFFLHQMSIGLFRVIGSLGRNMIVANTFGSFAMLVVMALGGFIISRDSIPKWWIWGFWVSPLMYAQNAAS 695 (1194)
Q Consensus 616 ~~~f~~~~l~~~~~~~~~~~l~~~i~~~~~~~~va~~~~~~~~l~~~l~~Gf~i~~~~ip~~~~w~~~isp~~y~~~al~ 695 (1194)
+.+||.+++++++...++.++++++++++++..+|+.+++++++++++++||+++.+.||+||+|++|+||+.|++++++
T Consensus 529 ~~~Ff~f~l~~~l~~~~~~~~~~~i~a~~~~~~~A~~~~~~~~~~~~lf~Gf~i~~~~mp~~~~W~~yisp~~yafeal~ 608 (1394)
T TIGR00956 529 AGRFFFYLLILFICTLAMSHLFRSIGAVTKTLSEAMTPAAILLLALSIYTGFAIPRPSMLGWSKWIYYVNPLAYAFESLM 608 (1394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHcccccChhhccHHHHHHHHcCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhhcCCcccccC---C---------------------CCCCchhHHHhhhcCCCCCCccHHHHHHHHHHHHHHHHHHHH
Q 000997 696 VNEFLGHSWDKKA---G---------------------NSNFSLGEAILRQRSLFPESYWYWIGVGAMLGYTLLFNALFT 751 (1194)
Q Consensus 696 ~nef~~~~~~~~~---~---------------------~~~~~~g~~~l~~~~~~~~~~~~w~~~g~ll~~~~~f~~l~~ 751 (1194)
+|||.+..+.|.. . +.....|+++|+. .+.....|+|++++++++|+++|.++..
T Consensus 609 ~nef~~~~~~C~~~~p~g~~y~~~~~~~~~C~~~g~~~g~~~~~G~~~L~~-~~~~~~~~~w~n~gil~~~~v~f~~~~~ 687 (1394)
T TIGR00956 609 VNEFHGRRFECSQYVPSGGGYDNLGVTNKVCTVVGAEPGQDYVDGDDYLKL-SFQYYNSHKWRNFGIIIGFTVFFFFVYI 687 (1394)
T ss_pred HhhhcCCcccccccccCCCCCCCCCccCccccCCCCcCCcccccHHHHHHh-cCCcccchhhHHHHHHHHHHHHHHHHHH
Confidence 9999998887731 0 1124578889985 3444556899999999999999999999
Q ss_pred HHHHhcCCCCCccceechhhh--hh-HhhhhcCcchhHHhhhhhhcccCccCccccc--CCcccc--cccceeEeeccee
Q 000997 752 FFLSYLNPLGKQQAVVSKKEL--QE-RDRRRKGENVVIELREYLQRSSSLNGKYFKQ--KGMVLP--FQPLSMAFGNINY 824 (1194)
Q Consensus 752 ~~l~~~~~~~~~~~~~~~~~~--~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~--~~~~~~~~~~~~~ 824 (1194)
++++|.++............. .. .......+......+..............+. .....+ .....+.|+|++|
T Consensus 688 l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~nl~~ 767 (1394)
T TIGR00956 688 LLTEFNKGAKQKGEILVFRRGSLKRAKKAGETSASNKNDIEAGEVLGSTDLTDESDDVNDEKDMEKESGEDIFHWRNLTY 767 (1394)
T ss_pred HHHHhccccCCCCceEeeccccccchhhcccccccccccccccccCCCCccccccccccccccccccCCCceEEEEeeEE
Confidence 999998865443322211110 00 0000000000000000000000000000000 000000 1123468888888
Q ss_pred eeecccccccccccccceEEeeeeeEEEeCCcEEEEEccCCCChHHHHhhhcCCCCCC-eeEEEEEEcCccCChhcccce
Q 000997 825 FVDVPVELKQEGVLEDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGG-IIEGDIYISGYPKRQETFARI 903 (1194)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~-~~~G~i~i~g~~~~~~~~~~~ 903 (1194)
.++.. .+++.+|+|||++++|||++||||||||||||||++|+|+.+++ +.+|+|.+||++... .+++.
T Consensus 768 ~~~~~---------~~~~~iL~~vs~~i~~Ge~~aI~G~sGaGKSTLL~~Lag~~~~g~~~~G~I~i~G~~~~~-~~~~~ 837 (1394)
T TIGR00956 768 EVKIK---------KEKRVILNNVDGWVKPGTLTALMGASGAGKTTLLNVLAERVTTGVITGGDRLVNGRPLDS-SFQRS 837 (1394)
T ss_pred EecCC---------CCCcEeeeCCEEEEECCEEEEEECCCCCCHHHHHHHHhCCCCCCCcceeEEEECCEECCh-hhhcc
Confidence 76321 23468999999999999999999999999999999999997643 457999999998753 46788
Q ss_pred eeEeecCCCCCCCCcHHHHHHHHhhhcCCCcCcHHHHHHHHHHHHHHcCCCcccCCcccCCCCCCCCHHHHHHHHHHHHH
Q 000997 904 SGYCEQNDIHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVEL 983 (1194)
Q Consensus 904 ~gyv~Q~~~~~~~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL 983 (1194)
+|||+|+|.+++.+||+|+|.|++.++.+...+.+++.+.++++++.++|.+++|+.++.++ .+|||||||||+||+||
T Consensus 838 i~yv~Q~~~~~~~~Tv~E~L~~~a~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~d~~v~~~~-~~LSgGqrqRl~Ia~aL 916 (1394)
T TIGR00956 838 IGYVQQQDLHLPTSTVRESLRFSAYLRQPKSVSKSEKMEYVEEVIKLLEMESYADAVVGVPG-EGLNVEQRKRLTIGVEL 916 (1394)
T ss_pred eeeecccccCCCCCCHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHcCChhhCCCeeCCCC-CCCCHHHhhHHHHHHHH
Confidence 99999999999999999999999998877666667777889999999999999999988654 38999999999999999
Q ss_pred hhCCC-EEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCeEEEEccCcEEEEeCCCCCchhHHH
Q 000997 984 VANPS-IVFMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLGSKSCELI 1062 (1194)
Q Consensus 984 ~~~p~-illLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~~~~~~~~~ 1062 (1194)
+.+|+ ||||||||||||+.++..|++.|++++++|+|||||+|||+..+++.||++++|++||+++|+|+.++++++++
T Consensus 917 ~~~P~~iLlLDEPTsgLD~~~~~~i~~~L~~la~~g~tvI~t~H~~~~~~~~~~D~vl~L~~GG~iv~~G~~~~~~~~~~ 996 (1394)
T TIGR00956 917 VAKPKLLLFLDEPTSGLDSQTAWSICKLMRKLADHGQAILCTIHQPSAILFEEFDRLLLLQKGGQTVYFGDLGENSHTII 996 (1394)
T ss_pred HcCCCeEEEEcCCCCCCCHHHHHHHHHHHHHHHHcCCEEEEEecCCCHHHHHhcCEEEEEcCCCEEEEECCcccccchHH
Confidence 99997 99999999999999999999999999888999999999999767888999999998889999999998888999
Q ss_pred HHHHhcCCCCCCCCCCCccccchhccCccccccccCcHHHHHhhcHHHHHHHHHHHhhCCCCCCC---cCCCCCccccCC
Q 000997 1063 KYFEAVEGVPKIRPGYNPAAWMLEVTSPVEESRLGVDFAEIYRRSNLFQRNRELVESLSKPSPSS---KKLNFSTKYSQS 1139 (1194)
Q Consensus 1063 ~~f~~~~g~~~~~~~~npa~~~l~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~ 1139 (1194)
+||+.+ |.++||+++|||||+||+++...+.....+|.+.|++|++++...+.++.+..+.... .+.....+|++|
T Consensus 997 ~yf~~~-G~~~~p~~~NpAd~~ldvi~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s 1075 (1394)
T TIGR00956 997 NYFEKH-GAPKCPEDANPAEWMLEVIGAAPGAHANQDYHEVWRNSSEYQAVKNELDRLEAELSKAEDDNDPDALSKYAAS 1075 (1394)
T ss_pred HHHHhc-CCCCCCCCCCHHHHHHHHhhcccccchhccHHHHHhcCHHHHHHHHHHHHhhcccccCccccccccccccCCC
Confidence 999997 6668999999999999999875544445689999999998887766665543321111 111122478999
Q ss_pred HHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHhccCCCCccccccc
Q 000997 1140 FANQFLACLRKQNLSYWRNPQYTAVRFFYTVVISLMLGSICWKFGAKRFAIKVF 1193 (1194)
Q Consensus 1140 ~~~q~~~l~~r~~~~~~R~~~~~~~r~~~~~~~~l~~g~~f~~~~~~~~~~~~~ 1193 (1194)
|++|+++|++|+++++||||.|+++|+++++++||++|++||+++++..++|+.
T Consensus 1076 ~~~q~~~l~~R~~~~~~R~~~~~~~r~~~~i~~~l~~G~~f~~~~~~~~~i~~~ 1129 (1394)
T TIGR00956 1076 LWYQFKLVLWRTFQQYWRTPDYLYSKFFLTIFAALFIGFTFFKVGTSLQGLQNQ 1129 (1394)
T ss_pred HHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHH
Confidence 999999999999999999999999999999999999999999999999988864
No 4
>KOG0061 consensus Transporter, ABC superfamily (Breast cancer resistance protein) [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=1.6e-81 Score=769.67 Aligned_cols=583 Identities=29% Similarity=0.472 Sum_probs=491.5
Q ss_pred CCCceEEEeeeEEEEEEecCCCCCCChhHHHHHHHHHHHHHHhHhcCCCcceeeeecceEeEeCCeEEEEEcCCCCcHHH
Q 000997 97 LPKIEVRFQNLTVESFVHLGSRALPTIPNFIFNMTEALLRQLRIYRGNRSKLTILDDLSGIIRPSRLTLLLGPPSSGKTT 176 (1194)
Q Consensus 97 ~p~~~v~~~~l~v~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKST 176 (1194)
...++++|+|+++++... .+..+++|+||||.++|||++|||||+||||||
T Consensus 21 ~~~~~~~~~~~~~~~~~~-----------------------------~~~~k~iL~~vsg~~~~Gel~AimG~SGsGKtT 71 (613)
T KOG0061|consen 21 LEPVKLSFRNLTLSSKEK-----------------------------SKKTKTILKGVSGTAKPGELLAIMGPSGSGKTT 71 (613)
T ss_pred cccceeEEEEEEEEecCC-----------------------------CCccceeeeCcEEEEecCeEEEEECCCCCCHHH
Confidence 346889999999987531 113468999999999999999999999999999
Q ss_pred HHHHHhcCcCCCCceeeEEEECCccCCCCCCCceEEEEecCCCCCCCCCHHHHHHHhhhccCCCCchhhhHHHHHHHHHh
Q 000997 177 LLLALAGRLGHHLQVSGKITYNGHGFKEFVPPRTSAYVSQQDWQVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIA 256 (1194)
Q Consensus 177 LL~~L~G~l~~~~~~~G~i~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~ 256 (1194)
||++|+|+.......+|+|++||++.+....++.+|||.|+|.++|++||+|||.|+|+++.+...
T Consensus 72 LL~~Lagr~~~~~~~~G~ilvNG~~~~~~~~~~~s~yV~QdD~l~~~LTV~EtL~f~A~lrlp~~~-------------- 137 (613)
T KOG0061|consen 72 LLNALAGRLNGGLKLSGEILLNGRPRDSRSFRKISGYVQQDDVLLPTLTVRETLRFSALLRLPSSL-------------- 137 (613)
T ss_pred HHHHHhccccCCCcceEEEEECCccCchhhhhheeEEEcccccccccccHHHHHHHHHHhcCCCCC--------------
Confidence 999999999876678999999998877777789999999999999999999999999998865421
Q ss_pred CCCCCchHHHHHHHhhccCcchhHHHHHHHHHhCCcccccccccCccCCCCChhhhhHHHHHHHHhCCCcEeEEecCCCC
Q 000997 257 GIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNG 336 (1194)
Q Consensus 257 ~~~~~~d~~~~~k~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~LSGGqkqRvsia~al~~~~~vlllDEptsg 336 (1194)
..++.+.+|+++++.|||.+|+||+||+...|||||||||||+||..|+.+|+||||||||||
T Consensus 138 -----------------~~~~k~~~V~~vi~~LgL~~~~~t~ig~~~~rgiSGGErkRvsia~Ell~~P~iLflDEPTSG 200 (613)
T KOG0061|consen 138 -----------------SKEEKRERVEEVISELGLEKCADTLIGNPGIRGLSGGERKRVSIALELLTDPSILFLDEPTSG 200 (613)
T ss_pred -----------------CHHHHHHHHHHHHHHcCChhhccceecCCCCCccccchhhHHHHHHHHHcCCCEEEecCCCCC
Confidence 112234579999999999999999999988899999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEcCCeEEEecChhhHHHHHHhcCCCCCCCCChhHHH
Q 000997 337 LDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEGQIVYQGPRVSVLDFFASMGFSCPKRKNVADFL 416 (1194)
Q Consensus 337 LD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~~G~iv~~G~~~~~~~~F~~~G~~cp~~~~~adfl 416 (1194)
||+.++.++++.|+++|+. |+|+|+++|||+.+++++||++++|++|+++|+|+++++.+||+++|++||++.||+||+
T Consensus 201 LDS~sA~~vv~~Lk~lA~~-grtVi~tIHQPss~lf~lFD~l~lLs~G~~vy~G~~~~~~~ff~~~G~~~P~~~Npadf~ 279 (613)
T KOG0061|consen 201 LDSFSALQVVQLLKRLARS-GRTVICTIHQPSSELFELFDKLLLLSEGEVVYSGSPRELLEFFSSLGFPCPELENPADFL 279 (613)
T ss_pred cchhhHHHHHHHHHHHHhC-CCEEEEEEeCCcHHHHHHHhHhhhhcCCcEEEecCHHHHHHHHHhCCCCCCCcCChHHHH
Confidence 9999999999999999987 999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhcCcccccccccCCCCCCcCCChhHHHHHHHhchhc--cchHHhhcCCccccCCCcCcccCCCCCCcHHHHHHHHHHH
Q 000997 417 QEVTSKKDQEQYWSNPYLPYRYISPGKFAEAFHSYHTG--KNLSEELAVPFDRRFNHPAALSTSKYGEKRSELLKTSFNW 494 (1194)
Q Consensus 417 ~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~R 494 (1194)
.++.+..++.+ ...+..+.++..... .....+......+...+. .........++|.|+..+++|
T Consensus 280 l~l~s~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~s~~~q~~~L~~R 346 (613)
T KOG0061|consen 280 LDLLSVDSGTR------------ELEEAVRIAKLINKFSQTDNLKKTLEALEKSLSTS-KKVEIGTSPSWWTQFKILLKR 346 (613)
T ss_pred HHHHccCCCch------------hHHhHHHHHHHhhhccccchhhhhHHHHhhhcccc-cccccccCCcHHHHHHHHHHH
Confidence 99887431100 000000111000000 000000000000000000 000011167899999999999
Q ss_pred HHHHHhcchhHHHHHHHHHHHHHHHHHHHHcccCCCCCccCcchhHHHHHHHHHHHHHHHHHH-HHHHHHhcchhhhhhc
Q 000997 495 QLLLMKRNSFIYVFKFIQLLIVALITMTVFFRTTMHHKTIDDGGLYLGALYFSMVIILFNGFT-EVSMLVAKLPVLYKHR 573 (1194)
Q Consensus 495 ~~~~~~r~~~~~~~~~~~~~~~ali~g~vf~~~~~~~~~~~~~~~~~g~lf~~l~~~~~~~~~-~~~~~~~~~~v~~k~r 573 (1194)
.+..+.|++.++..|.++.+++++++|++||+.+.+... .....|++|+.+.++.+..+. .+..+..++++|.||+
T Consensus 347 ~~~~~~R~~~~~~~r~~~~~~~~~~lg~~~~~~~~~~~~---~~~~~g~~~~~~~~~~f~~~~~~i~~f~~e~~~f~rE~ 423 (613)
T KOG0061|consen 347 SLKNIRRDPSLLLLRLIQSLVTGLLLGLLYLNLGNDAKG---IQNRLGLFFFILSFMTFLSMFGAVPVFPQERPIFLRET 423 (613)
T ss_pred HhHHHhhcHHHHHHHHHHHHHHHHHHHHHhhCCCCchHH---HHHHHHHHHHHHHHHHHHHHHhHHHHhHHHHHHHHHHH
Confidence 999999999999999999999999999999998644332 234578888888887666665 5888999999999999
Q ss_pred cccccchhhHHHHHHHHHhhHHHHhhhHhhheeeeeccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccChHHHHHH
Q 000997 574 DLHFYPSWVYTIPSWALSIPTSLIESGFWVAVTYYVIGYDPNVVRFSRQLLLYFFLHQMSIGLFRVIGSLGRNMIVANTF 653 (1194)
Q Consensus 574 ~~~~y~~~ay~l~~~~~~iP~~~i~~~i~~~i~Y~~~gl~~~~~~f~~~~l~~~~~~~~~~~l~~~i~~~~~~~~va~~~ 653 (1194)
..++|+.++|++++.+.++|+.++.+++|.+++|||+|+.++..+|+.++++.++...++.+++.+++++.++...|.++
T Consensus 424 ~~~~Y~~s~y~la~~l~~lP~~~i~~~if~~i~Y~m~gl~~~~~~f~~~~l~~~~~~~~a~s~~~~i~~~~~~~~~a~~~ 503 (613)
T KOG0061|consen 424 SSGLYRLSSYYLAKTLAELPFLLVLSIIFSSIVYWMVGLNPGLSRFLYFLLIILLSSLVAESLGLFISAIVPNLSLATSL 503 (613)
T ss_pred hcCchhHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhccCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhheeeh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhccccCCCcchhHHHHHhhcHHHHHHHHHHHhhhcCCcccccCC--CCCCchhHHHhhhcCCCCCCcc
Q 000997 654 GSFAMLVVMALGGFIISRDSIPKWWIWGFWVSPLMYAQNAASVNEFLGHSWDKKAG--NSNFSLGEAILRQRSLFPESYW 731 (1194)
Q Consensus 654 ~~~~~l~~~l~~Gf~i~~~~ip~~~~w~~~isp~~y~~~al~~nef~~~~~~~~~~--~~~~~~g~~~l~~~~~~~~~~~ 731 (1194)
++++.+.+++++||+++.+.||.||.|+.|+|+..|+++++..|+|.+....|... ..+...+..+++..++...+
T Consensus 504 ~~~~~~~f~l~~G~fi~~~~ip~~~~w~~~~S~~ry~~e~l~~n~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-- 581 (613)
T KOG0061|consen 504 GPVLLLPFLLFGGFFINFDSIPKYFRWISYLSYFRYAFEALLINQFSGGSSRCFLSGNLCCESTGEDVLKQLGFEDSS-- 581 (613)
T ss_pred HHHHHHHHHHHhhhhcCcccccHHHHHHHHHhHHHHHHHHHHHHHhhccccccccCcCCcccccHHHHHHhcCCcccc--
Confidence 99999999999999999999999999999999999999999999999733333222 34567788999988886654
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcC
Q 000997 732 YWIGVGAMLGYTLLFNALFTFFLSYLN 758 (1194)
Q Consensus 732 ~w~~~g~ll~~~~~f~~l~~~~l~~~~ 758 (1194)
.|.++.+++++.++|.++.++++.+..
T Consensus 582 ~~~~l~~l~~~~~~~~il~y~~L~~~~ 608 (613)
T KOG0061|consen 582 FWLDLLVLLAFIVFFRVLGYLALRFRV 608 (613)
T ss_pred cchhHHHHHHHHHHHHHHHHHHHHhhc
Confidence 588999999999999999999998753
No 5
>TIGR00955 3a01204 The Eye Pigment Precursor Transporter (EPP) Family protein.
Probab=100.00 E-value=1.7e-80 Score=770.63 Aligned_cols=569 Identities=24% Similarity=0.401 Sum_probs=480.2
Q ss_pred CcceeeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCceeeEEEECCccCCCCCCCceEEEEecCCCCCCCC
Q 000997 145 RSKLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVPPRTSAYVSQQDWQVAEM 224 (1194)
Q Consensus 145 ~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~~~~~~~~yv~Q~d~~~~~l 224 (1194)
+.++++|+|+|+.++|||+++|+|||||||||||++|+|+.++....+|+|.+||.+++....++.++||+|+|++++++
T Consensus 35 ~~~~~iL~~vs~~i~~Ge~~aI~G~sGsGKSTLL~~L~g~~~~~~~~~G~i~~~g~~~~~~~~~~~i~yv~Q~~~~~~~l 114 (617)
T TIGR00955 35 RPRKHLLKNVSGVAKPGELLAVMGSSGAGKTTLMNALAFRSPKGVKGSGSVLLNGMPIDAKEMRAISAYVQQDDLFIPTL 114 (617)
T ss_pred cCccccccCCEEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCCCCcceeEEEECCEECCHHHHhhhceeeccccccCccC
Confidence 44578999999999999999999999999999999999998775456899999999876544567899999999999999
Q ss_pred CHHHHHHHhhhccCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhccCcchhHHHHHHHHHhCCcccccccccCcc-
Q 000997 225 TVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEM- 303 (1194)
Q Consensus 225 TV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~k~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~- 303 (1194)
||+|||.|+++++.+..... .+.+.+++.+++.+||.+++||.||++.
T Consensus 115 TV~e~l~f~~~~~~~~~~~~-------------------------------~~~~~~v~~~l~~lgL~~~~~t~vg~~~~ 163 (617)
T TIGR00955 115 TVREHLMFQAHLRMPRRVTK-------------------------------KEKRERVDEVLQALGLRKCANTRIGVPGR 163 (617)
T ss_pred cHHHHHHHHHhcCCCCCCCH-------------------------------HHHHHHHHHHHHHcCchhcCcCccCCCCC
Confidence 99999999988764321100 0112358899999999999999999864
Q ss_pred CCCCChhhhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEcC
Q 000997 304 LKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSE 383 (1194)
Q Consensus 304 ~~~LSGGqkqRvsia~al~~~~~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~~ 383 (1194)
.++|||||||||+||++|+.+|+++||||||+|||+.++.++++.|+++++ .++|+|+++|||+.+++++||++++|++
T Consensus 164 ~~~LSgGqrkRvsia~aL~~~p~vlllDEPtsgLD~~~~~~l~~~L~~l~~-~g~tvi~~~hq~~~~i~~~~D~i~ll~~ 242 (617)
T TIGR00955 164 VKGLSGGERKRLAFASELLTDPPLLFCDEPTSGLDSFMAYSVVQVLKGLAQ-KGKTIICTIHQPSSELFELFDKIILMAE 242 (617)
T ss_pred CCCcCcchhhHHHHHHHHHcCCCEEEeeCCCcchhHHHHHHHHHHHHHHHh-CCCEEEEEeCCCCHHHHHHhceEEEeeC
Confidence 689999999999999999999999999999999999999999999999986 4788999999999999999999999999
Q ss_pred CeEEEecChhhHHHHHHhcCCCCCCCCChhHHHHhhcCcccccccccCCCCCCcCCChhHHHHHHHhchhccchHHhhcC
Q 000997 384 GQIVYQGPRVSVLDFFASMGFSCPKRKNVADFLQEVTSKKDQEQYWSNPYLPYRYISPGKFAEAFHSYHTGKNLSEELAV 463 (1194)
Q Consensus 384 G~iv~~G~~~~~~~~F~~~G~~cp~~~~~adfl~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 463 (1194)
|+++|+|+++++.+||+++||+||++.|++||+.++.+....... . .....+++.+.|+.+..+++..+....
T Consensus 243 G~~v~~G~~~~~~~~f~~~g~~~p~~~n~ad~~~~~~~~~~~~~~-----~--~~~~~~~~~~~~~~s~~~~~~~~~~~~ 315 (617)
T TIGR00955 243 GRVAYLGSPDQAVPFFSDLGHPCPENYNPADFYVQVLAVIPGSEN-----E--SRERIEKICDSFAVSDIGRDMLVNTNL 315 (617)
T ss_pred CeEEEECCHHHHHHHHHHcCCCCCCCCChHHHHHHHhhcCccccc-----c--hHHHHHHHHHHHhcchhhHHHHHHhhh
Confidence 999999999999999999999999999999999998765322110 0 011234555666655544443333221
Q ss_pred Ccccc--C-CCcCcccCCCCCCcHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHcccCCCCCccCcchhH
Q 000997 464 PFDRR--F-NHPAALSTSKYGEKRSELLKTSFNWQLLLMKRNSFIYVFKFIQLLIVALITMTVFFRTTMHHKTIDDGGLY 540 (1194)
Q Consensus 464 ~~~~~--~-~~~~~~~~~~~~~s~~~~~~~~~~R~~~~~~r~~~~~~~~~~~~~~~ali~g~vf~~~~~~~~~~~~~~~~ 540 (1194)
..... . ..........+..+++.|+..+++|.++..+||+..+..++++.+++|+++|++|++.+.+. .+....
T Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~l~~R~~~~~~R~~~~~~~~~~~~i~~~li~G~~f~~~~~~~---~~~~~~ 392 (617)
T TIGR00955 316 WSGKAGGLVKDSENMEGIGYNASWWTQFYALLKRSWLSVLRDPLLLKVRLIQTMMTAILIGLIYLGQGLTQ---KGVQNI 392 (617)
T ss_pred hhccccccccccccccccccCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHhhcCCCCCH---HHHHHH
Confidence 11100 0 00011122456788999999999999999999999999999999999999999999986432 233445
Q ss_pred HHHHHHHHHHHHHHHH-HHHHHHHhcchhhhhhccccccchhhHHHHHHHHHhhHHHHhhhHhhheeeeeccccccHHHH
Q 000997 541 LGALYFSMVIILFNGF-TEVSMLVAKLPVLYKHRDLHFYPSWVYTIPSWALSIPTSLIESGFWVAVTYYVIGYDPNVVRF 619 (1194)
Q Consensus 541 ~g~lf~~l~~~~~~~~-~~~~~~~~~~~v~~k~r~~~~y~~~ay~l~~~~~~iP~~~i~~~i~~~i~Y~~~gl~~~~~~f 619 (1194)
.|++|+.++.++|..+ ..+..+..++++++||+..++|++++|++++++.++|+.++.+++|.+++|||+|+.+++.+|
T Consensus 393 ~g~lf~~~~~~~f~~~~~~~~~f~~er~v~~rE~~~~~Y~~~~y~la~~l~~lp~~~~~~~if~~i~Y~~~gl~~~~~~f 472 (617)
T TIGR00955 393 NGALFLFLTNMTFQNVFPVINVFTAELPVFLRETRSGLYRVSAYFLAKTIAELPLFIILPALFTSITYWMIGLRSGATHF 472 (617)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHHHHHHHhhhheeccCCccHHHH
Confidence 7889998888877765 446677789999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHcccChHHHHHHHHHHHHHHHHHhhccccCCCcchhHHHHHhhcHHHHHHHHHHHhhh
Q 000997 620 SRQLLLYFFLHQMSIGLFRVIGSLGRNMIVANTFGSFAMLVVMALGGFIISRDSIPKWWIWGFWVSPLMYAQNAASVNEF 699 (1194)
Q Consensus 620 ~~~~l~~~~~~~~~~~l~~~i~~~~~~~~va~~~~~~~~l~~~l~~Gf~i~~~~ip~~~~w~~~isp~~y~~~al~~nef 699 (1194)
+.+++++++...++.+++.++++++++..+|..+++++.+++++++||+++.+.||.||+|++|+||++|+++++++|||
T Consensus 473 ~~f~l~~~l~~~~~~s~~~~i~~~~~~~~~a~~~~~~~~~~~~lf~G~~i~~~~ip~~~~W~~~isp~~ya~~al~~nef 552 (617)
T TIGR00955 473 LTFLFLVTLVANVATSFGYLISCAFSSTSMALTVGPPFVIPFLLFGGFFINSDSIPVYFKWLSYLSWFRYGNEGLLINQW 552 (617)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHhhcccChhhccHHHHHHHHcCHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCcc-cccCCC---CCCchhHHHhhhcCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 000997 700 LGHSW-DKKAGN---SNFSLGEAILRQRSLFPESYWYWIGVGAMLGYTLLFNALFTFFLSYL 757 (1194)
Q Consensus 700 ~~~~~-~~~~~~---~~~~~g~~~l~~~~~~~~~~~~w~~~g~ll~~~~~f~~l~~~~l~~~ 757 (1194)
.+..+ .|...+ .+...|+.+++.+++... ++|.+++++++++++|.++.+++|++.
T Consensus 553 ~~~~~~~c~~~~~~~~c~~~g~~~l~~~g~~~~--~~~~~~~il~~~~~~~~~l~~~~L~~~ 612 (617)
T TIGR00955 553 SDVDNIECTSANTTGPCPSSGEVILETLSFRNA--DLYLDLIGLVILIFFFRLLAYFALRIR 612 (617)
T ss_pred CCCccccccCcCcCCCCCcChHHHHHhcCCCcc--cHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88765 333211 133458999999988664 459999999999999999999999874
No 6
>PLN03211 ABC transporter G-25; Provisional
Probab=100.00 E-value=1.7e-79 Score=759.96 Aligned_cols=608 Identities=22% Similarity=0.323 Sum_probs=469.4
Q ss_pred CCCCceEEEeeeEEEEEEecCCCCCCChhHHHHHHHHH--HHHHHhHhcCCCcceeeeecceEeEeCCeEEEEEcCCCCc
Q 000997 96 ELPKIEVRFQNLTVESFVHLGSRALPTIPNFIFNMTEA--LLRQLRIYRGNRSKLTILDDLSGIIRPSRLTLLLGPPSSG 173 (1194)
Q Consensus 96 ~~p~~~v~~~~l~v~~~~~~~~~~~~t~~~~~~~~~~~--~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsG 173 (1194)
..++++++|.|+++.+.......+...+. +.... -.+++.. ...++++|+|||++++|||+++|+||||||
T Consensus 34 ~~~~~~~~~~~~~y~~~~~~~~~~~~~~~----~~~~~~~~~~~l~~---~~~~~~iL~~vs~~i~~Ge~~aI~GpnGaG 106 (659)
T PLN03211 34 SCYPITLKFMDVCYRVKFENMKNKGSNIK----RILGHKPKISDETR---QIQERTILNGVTGMASPGEILAVLGPSGSG 106 (659)
T ss_pred CCCceEEEEEeEEEEEccCCCcccccccc----cccccccccccccc---cCCCCeeeeCCEEEEECCEEEEEECCCCCC
Confidence 34579999999999986431111111110 00000 0111111 112457999999999999999999999999
Q ss_pred HHHHHHHHhcCcCCCCceeeEEEECCccCCCCCCCceEEEEecCCCCCCCCCHHHHHHHhhhccCCCCchhhhHHHHHHH
Q 000997 174 KTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVPPRTSAYVSQQDWQVAEMTVRETLDFAGQCQGVGSKYDMITELARRE 253 (1194)
Q Consensus 174 KSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e 253 (1194)
|||||++|+|++++. ..+|+|.+||+++... .++.++||+|++.+++.+||+||+.|++.++.+.... .
T Consensus 107 KSTLL~iLaG~~~~~-~~sG~I~inG~~~~~~-~~~~i~yv~Q~~~l~~~lTV~E~l~~~a~~~~~~~~~-------~-- 175 (659)
T PLN03211 107 KSTLLNALAGRIQGN-NFTGTILANNRKPTKQ-ILKRTGFVTQDDILYPHLTVRETLVFCSLLRLPKSLT-------K-- 175 (659)
T ss_pred HHHHHHHHhCCCCCC-ceeEEEEECCEECchh-hccceEEECcccccCCcCCHHHHHHHHHHhCCCCCCC-------H--
Confidence 999999999998763 3589999999887532 2356899999999999999999999987654221100 0
Q ss_pred HHhCCCCCchHHHHHHHhhccCcchhHHHHHHHHHhCCcccccccccCccCCCCChhhhhHHHHHHHHhCCCcEeEEecC
Q 000997 254 KIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEI 333 (1194)
Q Consensus 254 ~~~~~~~~~d~~~~~k~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~LSGGqkqRvsia~al~~~~~vlllDEp 333 (1194)
.+...+++++++.+||++++||.||+...++|||||||||+||++|+.+|+||+||||
T Consensus 176 ----------------------~~~~~~v~~~l~~lgL~~~~~t~vg~~~~~~LSgGerqRv~ia~aL~~~P~iLlLDEP 233 (659)
T PLN03211 176 ----------------------QEKILVAESVISELGLTKCENTIIGNSFIRGISGGERKRVSIAHEMLINPSLLILDEP 233 (659)
T ss_pred ----------------------HHHHHHHHHHHHHcCChhhcCceeCCCCCCCcChhhhhHHHHHHHHHhCCCEEEEeCC
Confidence 0112347889999999999999999999999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEcCCeEEEecChhhHHHHHHhcCCCCCCCCChh
Q 000997 334 SNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEGQIVYQGPRVSVLDFFASMGFSCPKRKNVA 413 (1194)
Q Consensus 334 tsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~~G~iv~~G~~~~~~~~F~~~G~~cp~~~~~a 413 (1194)
|+|||+.++.++++.|+++++ .++|+|+++||+..+++++||+|++|++|+++|+|+.+++.+||+++||+||++.|||
T Consensus 234 tsgLD~~~~~~l~~~L~~l~~-~g~TvI~~sH~~~~~i~~~~D~iilL~~G~iv~~G~~~~~~~~f~~~G~~~P~~~NpA 312 (659)
T PLN03211 234 TSGLDATAAYRLVLTLGSLAQ-KGKTIVTSMHQPSSRVYQMFDSVLVLSEGRCLFFGKGSDAMAYFESVGFSPSFPMNPA 312 (659)
T ss_pred CCCcCHHHHHHHHHHHHHHHh-CCCEEEEEecCCCHHHHHhhceEEEecCCcEEEECCHHHHHHHHHHCCCCCCCCCCHH
Confidence 999999999999999999986 4788888888888889999999999999999999999999999999999999999999
Q ss_pred HHHHhhcCcccccccccCCCCCCcCCChhHHHHHHHhchhccchHHhhcC---CccccC-----CCcCc-ccCCCCCCcH
Q 000997 414 DFLQEVTSKKDQEQYWSNPYLPYRYISPGKFAEAFHSYHTGKNLSEELAV---PFDRRF-----NHPAA-LSTSKYGEKR 484 (1194)
Q Consensus 414 dfl~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~-----~~~~~-~~~~~~~~s~ 484 (1194)
||+.++.+...+.........+ .....+.+.|++... +...+.... ...... ..+.. .....+..++
T Consensus 313 Df~ldv~~~~~~~~~~~~~~~~---~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~ 388 (659)
T PLN03211 313 DFLLDLANGVCQTDGVSEREKP---NVKQSLVASYNTLLA-PKVKAAIEMSHFPQANARFVGSASTKEHRSSDRISISTW 388 (659)
T ss_pred HHHHHHcCccccCCCccccccc---hHHHHHHHHHHhhcc-HHHHHHHhhhhhhcchhhhhhcccccccccCCCccCCCH
Confidence 9999998754321100000001 012233344432111 111111100 000000 00000 0112245679
Q ss_pred HHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHcccCCCCCccCcchhHHHHHHHHHHHHHH-HHHHHHHHHH
Q 000997 485 SELLKTSFNWQLLLMKRNSFIYVFKFIQLLIVALITMTVFFRTTMHHKTIDDGGLYLGALYFSMVIILF-NGFTEVSMLV 563 (1194)
Q Consensus 485 ~~~~~~~~~R~~~~~~r~~~~~~~~~~~~~~~ali~g~vf~~~~~~~~~~~~~~~~~g~lf~~l~~~~~-~~~~~~~~~~ 563 (1194)
+.|+..+++|++.. +|+..+...|+++.+++|+++|++||+.+ ..+.+...|++||++++.++ +.+..+..+.
T Consensus 389 ~~Q~~~L~~R~~~~-~r~~~~~~~r~~~~i~~~ll~G~lf~~~~-----~~~~~~r~g~lff~~~~~~~~~~~~~~~~f~ 462 (659)
T PLN03211 389 FNQFSILLQRSLKE-RKHESFNTLRVFQVIAAALLAGLMWWHSD-----FRDVQDRLGLLFFISIFWGVFPSFNSVFVFP 462 (659)
T ss_pred HHHHHHHHHHHHHH-HhCcHHHHHHHHHHHHHHHHHHHHHhcCC-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999887 78888888999999999999999999874 12345668999998777554 5567788888
Q ss_pred hcchhhhhhccccccchhhHHHHHHHHHhhHHHHhhhHhhheeeeeccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Q 000997 564 AKLPVLYKHRDLHFYPSWVYTIPSWALSIPTSLIESGFWVAVTYYVIGYDPNVVRFSRQLLLYFFLHQMSIGLFRVIGSL 643 (1194)
Q Consensus 564 ~~~~v~~k~r~~~~y~~~ay~l~~~~~~iP~~~i~~~i~~~i~Y~~~gl~~~~~~f~~~~l~~~~~~~~~~~l~~~i~~~ 643 (1194)
.++++++|||..++|++++|++++++.++|+.++.+++|.+++|||+|+.+++.+|+.+++++++...++.+++.+++++
T Consensus 463 ~er~v~~rE~~~~~Y~~~~Y~la~~l~elP~~~~~~~if~~i~Y~m~Gl~~~~~~F~~f~li~~l~~~~~~s~g~~i~a~ 542 (659)
T PLN03211 463 QERAIFVKERASGMYTLSSYFMARIVGDLPMELILPTIFLTVTYWMAGLKPELGAFLLTLLVLLGYVLVSQGLGLALGAA 542 (659)
T ss_pred HhhHHHHHhhhCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhheeEcCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccChHHHHHHHHHHHHHHHHHhhccccCCCcchhHHHHHhhcHHHHHHHHHHHhhhcCCcc-----cccCCCCCCchhHH
Q 000997 644 GRNMIVANTFGSFAMLVVMALGGFIISRDSIPKWWIWGFWVSPLMYAQNAASVNEFLGHSW-----DKKAGNSNFSLGEA 718 (1194)
Q Consensus 644 ~~~~~va~~~~~~~~l~~~l~~Gf~i~~~~ip~~~~w~~~isp~~y~~~al~~nef~~~~~-----~~~~~~~~~~~g~~ 718 (1194)
+++..+|+++++++.+++++|+||+++ .||.||+|++|+||+.|+++++++|||.+.+. .|..+.+....+..
T Consensus 543 ~~~~~~a~~~~~~~~~~~~lfsGf~i~--~ip~~~~W~~ylS~~~y~~eal~~nef~~~~~~~~~~~C~~~~~~~~~~c~ 620 (659)
T PLN03211 543 IMDAKKASTIVTVTMLAFVLTGGFYVH--KLPSCMAWIKYISTTFYSYRLLINVQYGEGKRISSLLGCSLPHGSDRASCK 620 (659)
T ss_pred cCCHHHHHHHHHHHHHHHHHHhhhhHh--hchHHHHHHHHhCHHHHHHHHHHHHhcCCccccccccCCCCcccCCCCCCc
Confidence 999999999999999999999999997 79999999999999999999999999976432 33221110011111
Q ss_pred HhhhcCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHhcC
Q 000997 719 ILRQRSLFPESYWYWIGVGAMLGYTLLFNALFTFFLSYLN 758 (1194)
Q Consensus 719 ~l~~~~~~~~~~~~w~~~g~ll~~~~~f~~l~~~~l~~~~ 758 (1194)
++....+. ....|.+++++++++++|.++.+++|++.+
T Consensus 621 ~~~~~~~~--~~~~~~~~~~l~~~~~~~~~l~~~~L~~~~ 658 (659)
T PLN03211 621 FVEEDVAG--QISPATSVSVLIFMFVGYRLLAYLALRRIK 658 (659)
T ss_pred cchhhhhc--ccchHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 22222222 234788999999999999999999987653
No 7
>PLN03140 ABC transporter G family member; Provisional
Probab=100.00 E-value=5.3e-78 Score=795.20 Aligned_cols=597 Identities=23% Similarity=0.385 Sum_probs=496.3
Q ss_pred CCCCCceEEEeeeEEEEEEecCCCCCCChhHHHHHHHHHHHHHHhHhcCCCcceeeeecceEeEeCCeEEEEEcCCCCcH
Q 000997 95 LELPKIEVRFQNLTVESFVHLGSRALPTIPNFIFNMTEALLRQLRIYRGNRSKLTILDDLSGIIRPSRLTLLLGPPSSGK 174 (1194)
Q Consensus 95 ~~~p~~~v~~~~l~v~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGK 174 (1194)
++...+.+.|+||+|.++...+.+. ......++.+|+|||+.++||++++|+|||||||
T Consensus 861 ~~~~~~~~~~~~v~y~v~~~~~~~~---------------------~~~~~~~~~iL~~vs~~i~~Gel~aL~G~sGaGK 919 (1470)
T PLN03140 861 LPFTPLAMSFDDVNYFVDMPAEMKE---------------------QGVTEDRLQLLREVTGAFRPGVLTALMGVSGAGK 919 (1470)
T ss_pred cCCCcceEEEEEEEEEEccCccccc---------------------cccCcCCceEeeCcEEEEECCeEEEEECCCCCCH
Confidence 3555678999999999864311000 0011234579999999999999999999999999
Q ss_pred HHHHHHHhcCcCCCCceeeEEEECCccCCCCCCCceEEEEecCCCCCCCCCHHHHHHHhhhccCCCCchhhhHHHHHHHH
Q 000997 175 TTLLLALAGRLGHHLQVSGKITYNGHGFKEFVPPRTSAYVSQQDWQVAEMTVRETLDFAGQCQGVGSKYDMITELARREK 254 (1194)
Q Consensus 175 STLL~~L~G~l~~~~~~~G~i~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~ 254 (1194)
||||++|+|+..+. ..+|+|.+||++.++...++.+|||+|+|.|++.+||+|||.|++.++.+... + .
T Consensus 920 TTLL~~LaG~~~~g-~~~G~I~inG~~~~~~~~~~~igyv~Q~d~~~~~lTV~E~L~~~a~lr~~~~~-~------~--- 988 (1470)
T PLN03140 920 TTLMDVLAGRKTGG-YIEGDIRISGFPKKQETFARISGYCEQNDIHSPQVTVRESLIYSAFLRLPKEV-S------K--- 988 (1470)
T ss_pred HHHHHHHcCCCCCC-cccceEEECCccCChHHhhhheEEEccccccCCCCcHHHHHHHHHHhCCCCCC-C------H---
Confidence 99999999987542 46899999998875444457799999999999999999999998765422110 0 0
Q ss_pred HhCCCCCchHHHHHHHhhccCcchhHHHHHHHHHhCCcccccccccCccCCCCChhhhhHHHHHHHHhCCCcEeEEecCC
Q 000997 255 IAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEIS 334 (1194)
Q Consensus 255 ~~~~~~~~d~~~~~k~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~LSGGqkqRvsia~al~~~~~vlllDEpt 334 (1194)
.+....++++++.+||.+++|+.||+..+++|||||||||+||++|+.+|++|||||||
T Consensus 989 ---------------------~~~~~~v~~vl~~lgL~~~~~~~vg~~~~~~LSgGerkRvsIa~aL~~~P~lL~LDEPT 1047 (1470)
T PLN03140 989 ---------------------EEKMMFVDEVMELVELDNLKDAIVGLPGVTGLSTEQRKRLTIAVELVANPSIIFMDEPT 1047 (1470)
T ss_pred ---------------------HHHHHHHHHHHHHCCChhHhCCccCCCCCCCcCHHHHHHHHHHHHHhhCCCEEEEeCCC
Confidence 01123488999999999999999998878899999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEcC-CeEEEecCh----hhHHHHHHhc-CC-CCC
Q 000997 335 NGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSE-GQIVYQGPR----VSVLDFFASM-GF-SCP 407 (1194)
Q Consensus 335 sgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~~-G~iv~~G~~----~~~~~~F~~~-G~-~cp 407 (1194)
+|||+.++..+++.|+++++. ++|+|+++||+..+++++||++++|++ |+++|+||. +++.+||+++ |+ +||
T Consensus 1048 sgLD~~~a~~v~~~L~~l~~~-g~tVI~t~Hq~~~~i~~~~D~vllL~~gG~~v~~G~~~~~~~~~~~yF~~~~g~~~~p 1126 (1470)
T PLN03140 1048 SGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLMKRGGQVIYSGPLGRNSHKIIEYFEAIPGVPKIK 1126 (1470)
T ss_pred CCCCHHHHHHHHHHHHHHHHC-CCEEEEEeCCCCHHHHHhCCEEEEEcCCCEEEEECCcccccccHHHHHHhcCCCCCCC
Confidence 999999999999999999864 788899999988889999999999996 899999996 6899999998 66 599
Q ss_pred CCCChhHHHHhhcCcccccccccCCCCCCcCCChhHHHHHHHhchhccchHHhhcCCccccCCCcCcccCCCCCCcHHHH
Q 000997 408 KRKNVADFLQEVTSKKDQEQYWSNPYLPYRYISPGKFAEAFHSYHTGKNLSEELAVPFDRRFNHPAALSTSKYGEKRSEL 487 (1194)
Q Consensus 408 ~~~~~adfl~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~ 487 (1194)
+..|||||+.++.+..... ....++++.|+.+..+++..+.+..........+......+|..+++.|
T Consensus 1127 ~~~NPAd~~l~v~~~~~~~------------~~~~d~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~Q 1194 (1470)
T PLN03140 1127 EKYNPATWMLEVSSLAAEV------------KLGIDFAEHYKSSSLYQRNKALVKELSTPPPGASDLYFATQYSQSTWGQ 1194 (1470)
T ss_pred CCCCchhhhhhhhcccccc------------cccchHHHHHhccHHHHHHHHHHHHhccCCCCccccccCccccCCHHHH
Confidence 9999999999997643211 1124688888888776655443321111111111111235688899999
Q ss_pred HHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHcccCCCCCccCcchhHHHHHHHHHHHHHHHHHHH-HHHHHhcc
Q 000997 488 LKTSFNWQLLLMKRNSFIYVFKFIQLLIVALITMTVFFRTTMHHKTIDDGGLYLGALYFSMVIILFNGFTE-VSMLVAKL 566 (1194)
Q Consensus 488 ~~~~~~R~~~~~~r~~~~~~~~~~~~~~~ali~g~vf~~~~~~~~~~~~~~~~~g~lf~~l~~~~~~~~~~-~~~~~~~~ 566 (1194)
+..|++|+++.++|++..+..|+++.+++|+++|++||+.+.+..+.++.+...|++|+++++..++.+.. ++.+..+|
T Consensus 1195 ~~~l~~R~~~~~~R~p~~~~~r~~~~i~~al~~G~~f~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~p~~~~eR 1274 (1470)
T PLN03140 1195 FKSCLWKQWWTYWRSPDYNLVRFFFTLAAALMVGTIFWKVGTKRSNANDLTMVIGAMYAAVLFVGINNCSTVQPMVAVER 1274 (1470)
T ss_pred HHHHHHHHHHHHHCCHhHHHHHHHHHHHHHHHHHHHhhCCCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999998655444555556889998888877766544 45666799
Q ss_pred hhhhhhccccccchhhHHHHHHHHHhhHHHHhhhHhhheeeeeccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccC
Q 000997 567 PVLYKHRDLHFYPSWVYTIPSWALSIPTSLIESGFWVAVTYYVIGYDPNVVRFSRQLLLYFFLHQMSIGLFRVIGSLGRN 646 (1194)
Q Consensus 567 ~v~~k~r~~~~y~~~ay~l~~~~~~iP~~~i~~~i~~~i~Y~~~gl~~~~~~f~~~~l~~~~~~~~~~~l~~~i~~~~~~ 646 (1194)
++|+|||..++|++++|++++++.++|+.++.+++|.+++|||+||.+++..|+.++++.++...++.+++.++++++++
T Consensus 1275 ~vf~REr~~~~Y~~~~y~la~~l~eiP~~~~~~~if~~i~Y~m~Gl~~~~~~f~~~~~~~~l~~~~~~~~g~~~~a~~p~ 1354 (1470)
T PLN03140 1275 TVFYRERAAGMYSALPYAIAQVVCEIPYVLIQTTYYTLIVYAMVAFEWTAAKFFWFYFISFFSFLYFTYYGMMTVSLTPN 1354 (1470)
T ss_pred HHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHhhccccCCCcchhHHHHHhhcHHHHHHHHHHHhhhcCCcccccCCCC-CCchhHHH-hhhcC
Q 000997 647 MIVANTFGSFAMLVVMALGGFIISRDSIPKWWIWGFWVSPLMYAQNAASVNEFLGHSWDKKAGNS-NFSLGEAI-LRQRS 724 (1194)
Q Consensus 647 ~~va~~~~~~~~l~~~l~~Gf~i~~~~ip~~~~w~~~isp~~y~~~al~~nef~~~~~~~~~~~~-~~~~g~~~-l~~~~ 724 (1194)
..+|..+++++..++++|+||+++++.||.||+|+||+||+.|++++++.|||.+....+.+++. +...+.++ +..+|
T Consensus 1355 ~~~A~~~~~~~~~~~~lf~Gf~i~~~~iP~~~~W~~~isp~~y~~~~l~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~g 1434 (1470)
T PLN03140 1355 QQVAAIFAAAFYGLFNLFSGFFIPRPKIPKWWVWYYWICPVAWTVYGLIVSQYGDVEDTIKVPGGAPDPTIKWYIQDHYG 1434 (1470)
T ss_pred HHHHHHHHHHHHHHHHHHeeeccChHHCchHHHHHHHcCHHHHHHhhhHHHHhCCCCCcccCCCCCCCCcHHHHHHHhcC
Confidence 99999999999999999999999999999999999999999999999999999987766544431 12234444 67777
Q ss_pred CCCCCccHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Q 000997 725 LFPESYWYWIGVGAMLGYTLLFNALFTFFLSYLNP 759 (1194)
Q Consensus 725 ~~~~~~~~w~~~g~ll~~~~~f~~l~~~~l~~~~~ 759 (1194)
+.. .|.|.+++++++|+++|.+++.+++++++.
T Consensus 1435 ~~~--~~~~~~~~il~~~~~~f~~~~~~~~~~~~~ 1467 (1470)
T PLN03140 1435 YDP--DFMGPVAAVLVGFTVFFAFIFAFCIRTLNF 1467 (1470)
T ss_pred cCc--ccccchhhhHHHHHHHHHHHHHHHHHHhhc
Confidence 764 467899999999999999999999998875
No 8
>KOG0055 consensus Multidrug/pheromone exporter, ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=3.4e-73 Score=701.52 Aligned_cols=784 Identities=20% Similarity=0.244 Sum_probs=407.3
Q ss_pred CCCcceeeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCceeeEEEECCccCCCCCC---CceEEEEecCCC
Q 000997 143 GNRSKLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVP---PRTSAYVSQQDW 219 (1194)
Q Consensus 143 ~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~~~---~~~~~yv~Q~d~ 219 (1194)
+.+++..||+|+|+.|++|+.++|+|||||||||+++.|.+.++|. +|+|.++|.++.++.. +..+|.|+|+|.
T Consensus 361 PsRpdv~Il~g~sl~i~~G~~valVG~SGsGKST~i~LL~RfydP~---~G~V~idG~di~~~~~~~lr~~iglV~QePv 437 (1228)
T KOG0055|consen 361 PSRPDVKILKGVSLKIPSGQTVALVGPSGSGKSTLIQLLARFYDPT---SGEVLIDGEDIRNLNLKWLRSQIGLVSQEPV 437 (1228)
T ss_pred CCCCcchhhCCeEEEeCCCCEEEEECCCCCCHHHHHHHHHHhcCCC---CceEEEcCccchhcchHHHHhhcCeeeechh
Confidence 3445678999999999999999999999999999999999999987 9999999999887753 578999999997
Q ss_pred CCCCCCHHHHHHHhhhccCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhccCcchhHHHHHHHHHhCCcccccccc
Q 000997 220 QVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLV 299 (1194)
Q Consensus 220 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~k~~~~~~~~~~~~~~~~l~~lgL~~~~dt~v 299 (1194)
+|. .||+|||.|+-. +...+.+.++++.. ...+. +..|++.+||.|
T Consensus 438 lF~-~tI~eNI~~G~~----dat~~~i~~a~k~a--------------------------na~~f---i~~lp~g~~T~v 483 (1228)
T KOG0055|consen 438 LFA-TTIRENIRYGKP----DATREEIEEAAKAA--------------------------NAHDF---ILKLPDGYDTLV 483 (1228)
T ss_pred hhc-ccHHHHHhcCCC----cccHHHHHHHHHHc--------------------------cHHHH---HHhhHHhhcccc
Confidence 655 699999998531 11122222222111 01122 345888999999
Q ss_pred cCccCCCCChhhhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEE
Q 000997 300 GDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVI 379 (1194)
Q Consensus 300 g~~~~~~LSGGqkqRvsia~al~~~~~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vi 379 (1194)
|+.++ .|||||||||+|||||+.+|+|||||||||+||+.+...+.+.|.+..+ |+|+|+ +.|..+.+-+ +|+|+
T Consensus 484 ge~g~-qLSGGQKQRIAIARalv~~P~ILLLDEaTSaLD~~se~~Vq~ALd~~~~--grTTiv-VaHRLStIrn-aD~I~ 558 (1228)
T KOG0055|consen 484 GERGV-QLSGGQKQRIAIARALVRNPKILLLDEATSALDAESERVVQEALDKASK--GRTTIV-VAHRLSTIRN-ADKIA 558 (1228)
T ss_pred cCCCC-CCChHHHHHHHHHHHHHhCCCEEEecCcccccCHHHHHHHHHHHHHhhc--CCeEEE-Eeeehhhhhc-cCEEE
Confidence 98776 4999999999999999999999999999999999999999999998753 667776 5677777766 99999
Q ss_pred EEcCCeEEEecChhhHHHHHHhcCCCCCCCCChhHHH--HhhcCcccccccccCCCCCCcCCChhHHHHHHHhchhccch
Q 000997 380 LLSEGQIVYQGPRVSVLDFFASMGFSCPKRKNVADFL--QEVTSKKDQEQYWSNPYLPYRYISPGKFAEAFHSYHTGKNL 457 (1194)
Q Consensus 380 lL~~G~iv~~G~~~~~~~~F~~~G~~cp~~~~~adfl--~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 457 (1194)
+|++|+|++.|+++|++.. ..-.++.. |+.....+. ..+... . ..+.....+.+. .
T Consensus 559 v~~~G~IvE~G~h~ELi~~----------~G~Y~~lv~~Q~~~~~~~~-~~~~~~-~------~~~~~~s~~~s~----~ 616 (1228)
T KOG0055|consen 559 VMEEGKIVEQGTHDELIAL----------GGIYSSLVRLQELEKAAED-EEEEES-L------KEERSRSLKSSS----S 616 (1228)
T ss_pred EEECCEEEEecCHHHHHhc----------cchHHHHHHHHhhhhhhhc-cccccc-h------hhhhhhcccccc----c
Confidence 9999999999999999852 01112221 222211110 000000 0 000000000000 0
Q ss_pred HHhhcCCccccCC--CcCcccCCCCCCcHHHHHHHHHHHHHHHHhcchhHHHHHHHHHH-------HHHHHHHHHHcccC
Q 000997 458 SEELAVPFDRRFN--HPAALSTSKYGEKRSELLKTSFNWQLLLMKRNSFIYVFKFIQLL-------IVALITMTVFFRTT 528 (1194)
Q Consensus 458 ~~~~~~~~~~~~~--~~~~~~~~~~~~s~~~~~~~~~~R~~~~~~r~~~~~~~~~~~~~-------~~ali~g~vf~~~~ 528 (1194)
......+...... ............ ..+.....+.|-+...+.++.+.+...+..+ +.+++++.++--..
T Consensus 617 ~~~~~~~~~~~~~~~~~~~~e~~~~~~-~~~~~~~s~~~i~k~~~pe~~~l~lG~i~a~i~G~~~P~fa~~~s~~~~~f~ 695 (1228)
T KOG0055|consen 617 SPSLSRGSNRSNLLSVKPEGEDPEEPV-SEEDEKVSFWRIFKLNKPEWPYLLLGSLGAAIRGATYPLFAYVFSQVLEAFY 695 (1228)
T ss_pred cccccCCcccccccccccccccccccc-ccccccccHHHHHHhccchhHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHh
Confidence 0000000000000 000000000000 0000112233333344444444333333222 23333333332111
Q ss_pred C-CCCccCcchhHHHHHHHHHHHHHH----------HHHHHHHHHHhcchhhhh--hccccccchhhH--HH-HHHHHHh
Q 000997 529 M-HHKTIDDGGLYLGALYFSMVIILF----------NGFTEVSMLVAKLPVLYK--HRDLHFYPSWVY--TI-PSWALSI 592 (1194)
Q Consensus 529 ~-~~~~~~~~~~~~g~lf~~l~~~~~----------~~~~~~~~~~~~~~v~~k--~r~~~~y~~~ay--~l-~~~~~~i 592 (1194)
. +.+........+..+|.++....+ .-+.+....-.+...|.+ ..+..||.---. .+ ++...+.
T Consensus 696 ~~~~~~~~~~~~~~al~f~~l~~~~~i~~~~q~~~f~~~ge~Lt~R~R~~~F~~ll~qd~~wFD~~~nsg~l~~RLa~Da 775 (1228)
T KOG0055|consen 696 PPDDDELKREVRAWALIFLGLGIVSGITNFLQHYFFGIAGEKLTKRLRSMMFRALLRQEVGWFDDPENSGALSSRLATDA 775 (1228)
T ss_pred CCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccCCCccchHHHHHHhcch
Confidence 1 111111111124444443332211 111111111111222222 122333321111 11 1111111
Q ss_pred h---------HHHHhhhHhhheeeeeccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccChHH---------HHHHH
Q 000997 593 P---------TSLIESGFWVAVTYYVIGYDPNVVRFSRQLLLYFFLHQMSIGLFRVIGSLGRNMIV---------ANTFG 654 (1194)
Q Consensus 593 P---------~~~i~~~i~~~i~Y~~~gl~~~~~~f~~~~l~~~~~~~~~~~l~~~i~~~~~~~~v---------a~~~~ 654 (1194)
| ++.+...+-++++=..++|...+.--+.-+.++-++........+++......... ...+.
T Consensus 776 ~~vr~~v~~rl~~vv~~~~~~~~~iiiaf~~~W~lalv~la~~Pll~~~~~~~~~~~~~~~~~~~~~~~ea~~iA~eai~ 855 (1228)
T KOG0055|consen 776 SNVRAAVGDRLSLVVQNIAAVIIGIIIAFIYGWRLALVVLATFPLLILSGYLQKKFLKGFSKDDKKAYEEASKIAIEAVS 855 (1228)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHH
Confidence 1 11111111111110111111000000000000001111111111122111111110 00011
Q ss_pred HHHHHHHHHHhhccccC--C-Ccchh--HHHHHhhcHHHHHHHHHHHhhhcCCcccccCCCCCCchhHHHhhhcCCCCCC
Q 000997 655 SFAMLVVMALGGFIISR--D-SIPKW--WIWGFWVSPLMYAQNAASVNEFLGHSWDKKAGNSNFSLGEAILRQRSLFPES 729 (1194)
Q Consensus 655 ~~~~l~~~l~~Gf~i~~--~-~ip~~--~~w~~~isp~~y~~~al~~nef~~~~~~~~~~~~~~~~g~~~l~~~~~~~~~ 729 (1194)
.+=.+-.+..-..++.. + .-+++ ...--+++-+.|++....+--..+. ++..|......-.+.+..
T Consensus 856 NIrTV~al~~e~~~~~~y~~~l~~p~~~~~~~~~i~gl~f~~sqs~~~~~~A~---------~f~~G~~Li~~g~~~~~~ 926 (1228)
T KOG0055|consen 856 NIRTVAALCAEEKFMELYKEELEKPRKSSFKRGLISGLGFGFSQSLLFFVYAL---------SFWYGARLISNGEMTFED 926 (1228)
T ss_pred hHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---------HHHHhHHHHhcCCcCHHH
Confidence 10000000000000000 0 00000 0111112222222211110000000 000010000000000000
Q ss_pred ccHHHHHHHHHHHHHHHHH-HHHHHHHhcCCCCCccceechhhhhhHhhhhcCcchhHHhhhhhhcccCccCcccccCCc
Q 000997 730 YWYWIGVGAMLGYTLLFNA-LFTFFLSYLNPLGKQQAVVSKKELQERDRRRKGENVVIELREYLQRSSSLNGKYFKQKGM 808 (1194)
Q Consensus 730 ~~~w~~~g~ll~~~~~f~~-l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 808 (1194)
. +...+++.|.. ...-+..|.....+... +. ...-.. ..+.+..++ ....+.
T Consensus 927 ~-------~~vf~~l~~ta~~~~~~~s~~Pd~~ka~~-----------Aa----~~iF~i---~dr~~~i~~--~~~~~~ 979 (1228)
T KOG0055|consen 927 V-------FRVFMALSFTAMALGQASSYAPDISKAKI-----------AA----GSIFEI---LDRKPTIDP--DSTSGG 979 (1228)
T ss_pred H-------HHHHHHHHHHHHHHHHHHhhCcHHHHHHH-----------HH----HHHHHH---hcCCCCCCC--CCCCCC
Confidence 0 00000011110 11111222211100000 00 000000 000000000 001111
Q ss_pred ccccccceeEeecceeeeecccccccccccccceEEeeeeeEEEeCCcEEEEEccCCCChHHHHhhhcCCCCCCeeEEEE
Q 000997 809 VLPFQPLSMAFGNINYFVDVPVELKQEGVLEDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDI 888 (1194)
Q Consensus 809 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i 888 (1194)
..+-..-.+.|+|+++.++. .++.++|+|+|+++++|+.+||||||||||||.+.+|-+... +..|.|
T Consensus 980 ~~~~~~G~I~~~~V~F~YPs----------RP~~~Il~~l~l~i~~GqTvALVG~SGsGKSTvI~LLeRfYd--p~~G~V 1047 (1228)
T KOG0055|consen 980 KLPNVKGDIEFRNVSFAYPT----------RPDVPVLNNLSLSIRAGQTVALVGPSGSGKSTVISLLERFYD--PDAGKV 1047 (1228)
T ss_pred ccccceeEEEEeeeEeeCCC----------CCCchhhcCCcEEecCCCEEEEECCCCCCHHHHHHHHHHhcC--CCCCeE
Confidence 22223346889999998864 356789999999999999999999999999999999987655 679999
Q ss_pred EEcCccCCh---hcccceeeEeecCCCCCCCCcHHHHHHHHhhhcCCCcCcHHHHHHHHHHHHHHc-------CCCcccC
Q 000997 889 YISGYPKRQ---ETFARISGYCEQNDIHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELV-------ELTSLSG 958 (1194)
Q Consensus 889 ~i~g~~~~~---~~~~~~~gyv~Q~~~~~~~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l-------~l~~~~~ 958 (1194)
.|||++++. ...|+.+|.|.|+|.+|.. |++||+.|+. . +++.++ +.++.+.. +|.+-.|
T Consensus 1048 ~IDg~dik~lnl~~LR~~i~lVsQEP~LF~~-TIrENI~YG~-~----~vs~~e----Ii~Aak~ANaH~FI~sLP~GyD 1117 (1228)
T KOG0055|consen 1048 KIDGVDIKDLNLKWLRKQIGLVSQEPVLFNG-TIRENIAYGS-E----EVSEEE----IIEAAKLANAHNFISSLPQGYD 1117 (1228)
T ss_pred EECCcccccCCHHHHHHhcceeccCchhhcc-cHHHHHhccC-C----CCCHHH----HHHHHHHhhhHHHHhcCcCccc
Confidence 999998754 5678899999999999864 9999999981 1 123222 23333322 3444557
Q ss_pred CcccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCe
Q 000997 959 ALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDE 1038 (1194)
Q Consensus 959 ~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~~d~ 1038 (1194)
+.+|..+ .+||||||||++|||||++||+||+|||.||+||+++.+.|+++|.+. ..|+|.|+++|+++ ..+.+|.
T Consensus 1118 T~vGerG-~QLSGGQKQRIAIARAilRnPkILLLDEATSALDseSErvVQeALd~a-~~gRT~IvIAHRLS--TIqnaD~ 1193 (1228)
T KOG0055|consen 1118 TRVGERG-VQLSGGQKQRIAIARAILRNPKILLLDEATSALDSESERVVQEALDRA-MEGRTTIVIAHRLS--TIQNADV 1193 (1228)
T ss_pred CccCccc-CcCCchHHHHHHHHHHHHcCCCeeeeeccchhhhhhhHHHHHHHHHHh-hcCCcEEEEecchh--hhhcCCE
Confidence 7777655 479999999999999999999999999999999999999999999996 46999999999976 5688999
Q ss_pred EEEEccCcEEEEeCCC
Q 000997 1039 LLFMKRGGELIYAGPL 1054 (1194)
Q Consensus 1039 ~~~l~~gG~~~~~g~~ 1054 (1194)
|.|++ +|+|++.|.-
T Consensus 1194 I~Vi~-~G~VvE~GtH 1208 (1228)
T KOG0055|consen 1194 IAVLK-NGKVVEQGTH 1208 (1228)
T ss_pred EEEEE-CCEEEecccH
Confidence 99998 5899999974
No 9
>KOG0065 consensus Pleiotropic drug resistance proteins (PDR1-15), ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=1.9e-75 Score=718.78 Aligned_cols=559 Identities=26% Similarity=0.383 Sum_probs=473.4
Q ss_pred cceeeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCceeeEEEECCccCCCCCCCceEEEEecCCCCCCCCC
Q 000997 146 SKLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVPPRTSAYVSQQDWQVAEMT 225 (1194)
Q Consensus 146 ~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lT 225 (1194)
.++++|+||+|.++||.+|||||+|||||||||++|||+... .-++|+|++||++.++...+|.+|||.|+|.|.+++|
T Consensus 802 ~~~qLL~~V~G~~kPG~LTALMG~SGAGKTTLLdvLA~R~t~-G~I~Gdi~i~G~p~~q~tF~R~~GYvqQ~DiH~~~~T 880 (1391)
T KOG0065|consen 802 GTRQLLNNVSGAFKPGVLTALMGESGAGKTTLLDVLAGRKTG-GYIEGDILISGFPKDQETFARVSGYVEQQDIHSPELT 880 (1391)
T ss_pred cceEhhhcCceEecCCceeehhcCCCCchHHHHHHHhcCccc-ceEEeEEEECCeeCchhhhccccceeecccccCcccc
Confidence 567899999999999999999999999999999999999755 3689999999999987778899999999999999999
Q ss_pred HHHHHHHhhhccCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhccCcchhHHHHHHHHHhCCcccccccccCccCC
Q 000997 226 VRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEMLK 305 (1194)
Q Consensus 226 V~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~k~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~ 305 (1194)
|||.|.|+|.++.+.+. + ..+..+.+|++++.|+|++++|.+||+.+ .
T Consensus 881 VrESL~fSA~LRlp~~v-----------------~--------------~~ek~~yVe~Vi~lleL~~~~daiVG~~G-~ 928 (1391)
T KOG0065|consen 881 VRESLRFSAALRLPKEV-----------------S--------------DEEKYEYVEEVIELLELKEYADALVGLPG-S 928 (1391)
T ss_pred hHHHHHHHHHHcCCCcC-----------------C--------------HHHHHHHHHHHHHHhCchhhhhhhccCCC-C
Confidence 99999999988754321 0 11123469999999999999999999977 9
Q ss_pred CCChhhhhHHHHHHHHhCCC-cEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEc-C
Q 000997 306 GISGGQKKRLTTGELLVGPA-RVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLS-E 383 (1194)
Q Consensus 306 ~LSGGqkqRvsia~al~~~~-~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~-~ 383 (1194)
|||..||||++||-.|+.+| .||||||||||||+.++..|++.+|++++ .|+|++|+||||+.++++.||++++|. .
T Consensus 929 GLs~eQRKrLTIgVELvA~P~~ilFLDEPTSGLDsqaA~~i~~~lrkla~-tGqtIlCTIHQPS~~ife~FD~LLLLkrG 1007 (1391)
T KOG0065|consen 929 GLSTEQRKRLTIGVELVANPSSILFLDEPTSGLDSQAAAIVMRFLRKLAD-TGQTILCTIHQPSIDIFEAFDELLLLKRG 1007 (1391)
T ss_pred CCCHHHhceeeEEEEEecCCceeEEecCCCCCccHHHHHHHHHHHHHHHh-cCCeEEEEecCCcHHHHHHHhHHHHHhcC
Confidence 99999999999999999999 99999999999999999999999999997 689999999999999999999999995 6
Q ss_pred CeEEEecChh----hHHHHHHhcC-CCCCCCCChhHHHHhhcCcccccccccCCCCCCcCCChhHHHHHHHhchhccchH
Q 000997 384 GQIVYQGPRV----SVLDFFASMG-FSCPKRKNVADFLQEVTSKKDQEQYWSNPYLPYRYISPGKFAEAFHSYHTGKNLS 458 (1194)
Q Consensus 384 G~iv~~G~~~----~~~~~F~~~G-~~cp~~~~~adfl~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 458 (1194)
|++||.||.. .+++||++.| .+||+..|||||..|+.+...+.. ...++++.|+.+..++++.
T Consensus 1008 GqtVY~G~lG~~s~~li~YFes~~~~~~~~~~NPA~~mLevi~~~~~~~------------~~~D~a~~w~~S~e~k~~~ 1075 (1391)
T KOG0065|consen 1008 GQTVYFGPLGENSSKLIEYFESIGGVKCISDENPAEWMLEVIGAGAEAS------------LSVDFAEIWKNSEEYKRNK 1075 (1391)
T ss_pred CeEEEecCcccccHHHHHHHHhcCCccCCCCCChHHHHHhhcccccccc------------cCccHHHHHhccHHHHHHH
Confidence 8999999974 4667999987 899999999999999987644321 1237999999999988877
Q ss_pred HhhcC---CccccCCCcCcccCCCCCCcHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHcccCCCCCccC
Q 000997 459 EELAV---PFDRRFNHPAALSTSKYGEKRSELLKTSFNWQLLLMKRNSFIYVFKFIQLLIVALITMTVFFRTTMHHKTID 535 (1194)
Q Consensus 459 ~~~~~---~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~R~~~~~~r~~~~~~~~~~~~~~~ali~g~vf~~~~~~~~~~~ 535 (1194)
+++.. +... ..........|..+.|.|++.|++|++...||++.....|++..++.++++|..||+.+ .+.+
T Consensus 1076 e~v~~l~~~~~~--~~~~~~~~~~fa~s~~~Q~k~~l~Rq~~syWRsp~y~~ar~~~~i~~gl~iGf~F~~~g---~~~q 1150 (1391)
T KOG0065|consen 1076 ELVKELSQPPPG--FSTDLEFKTRFAQSLWYQFKLCLWRQFLSYWRSPDYLMARFALTIVAGLFIGFTFWKVG---HNVQ 1150 (1391)
T ss_pred HHHHHHhcCCcc--CCcccccccccchhHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHhheeeeeecC---CcHH
Confidence 66543 3222 12223334568899999999999999999999999999999999999999999999998 3455
Q ss_pred cchhHHHHHHHHHHHHHHHHHH-HHHHHHhcchhhhhhccccccchhhHHHHHHHHHhhHHHHhhhHhhheeeeeccccc
Q 000997 536 DGGLYLGALYFSMVIILFNGFT-EVSMLVAKLPVLYKHRDLHFYPSWVYTIPSWALSIPTSLIESGFWVAVTYYVIGYDP 614 (1194)
Q Consensus 536 ~~~~~~g~lf~~l~~~~~~~~~-~~~~~~~~~~v~~k~r~~~~y~~~ay~l~~~~~~iP~~~i~~~i~~~i~Y~~~gl~~ 614 (1194)
+.+..++++|.++++...+... .......++-++||||..++|+..+|++++.+.++|+.++.+++|.++.|+++||..
T Consensus 1151 ~lqn~m~a~yma~v~~~~~~~~~~~~~v~~e~~y~~RE~~s~mYs~~~~~~aq~~vEiP~~l~~stl~~~~~Y~~iGF~~ 1230 (1391)
T KOG0065|consen 1151 GLQNAMGAAYMATVFSGPNNNQLQQPAVATERLYEYRERASNMYSWTPFALAQVLVEIPYNLLQSTLFFLITYYPIGFYW 1230 (1391)
T ss_pred HHHHHHHHHHHHHHHhhhhhhhhhhhHHhhhhhheeeecccCcccHHHHHHHHHHHHHHHHHHHHHHhheeeeeeccchh
Confidence 6667788888887765544433 445566788999999999999999999999999999999999999999999999999
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHcccChHHHHHHHHHHHHHHHHHhhccccCCCcchhHHHHHhhcHHHHHHHHH
Q 000997 615 NVVRFSRQLLLYFFLHQMSIGLFRVIGSLGRNMIVANTFGSFAMLVVMALGGFIISRDSIPKWWIWGFWVSPLMYAQNAA 694 (1194)
Q Consensus 615 ~~~~f~~~~l~~~~~~~~~~~l~~~i~~~~~~~~va~~~~~~~~l~~~l~~Gf~i~~~~ip~~~~w~~~isp~~y~~~al 694 (1194)
++.+|+.+++..++.......++.++.+++|+..+|..+.+++..++.+|+|+++++..||.||+|+||+||+.|..+++
T Consensus 1231 ~a~~~~~f~~~~~~f~lYf~~~Gmm~~s~tPn~~~Aav~~s~~~s~~~~F~G~l~p~~~iP~fW~wmy~lsP~ty~l~gl 1310 (1391)
T KOG0065|consen 1231 TASKFFWFLLFMFIFFLYFTTLGMMLVSLTPNLQTAAVIASLFFSFWNLFSGFLQPRSLIPKFWIWMYYLSPVTYTLEGL 1310 (1391)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHhcccccccccccceeeeeeecCcHHHHHHHH
Confidence 99999999999899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhhcCCcccccCCC-------CCCchhHHHhhhcC----CCCCCccHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 000997 695 SVNEFLGHSWDKKAGN-------SNFSLGEAILRQRS----LFPESYWYWIGVGAMLGYTLLFNALFTFFLSYL 757 (1194)
Q Consensus 695 ~~nef~~~~~~~~~~~-------~~~~~g~~~l~~~~----~~~~~~~~w~~~g~ll~~~~~f~~l~~~~l~~~ 757 (1194)
....+++..-.|...+ ...+.|+..-..++ +..+..- ....+.+.|.+.+..++.+.++|.
T Consensus 1311 i~~~~~d~~v~c~~~e~~~~~pp~g~tcge~m~~~~~~~~Gy~~n~~a--~~~c~~c~y~v~~~~l~~f~~~y~ 1382 (1391)
T KOG0065|consen 1311 ISSQLGDVEVTCEDSEMNYFDPPSGQTCGEFMEDFFGEGTGYLHNPLA--TTACVYCAYTVADAFLAAFNIKYL 1382 (1391)
T ss_pred HHHHhCCCceeeecCCccccCCCCCcCHHHHHHHHhccCcceeccCcc--eeEEEEeeeehHHHHHHHHHHHHH
Confidence 9999987665553322 34567776655555 3222110 011123345566666666666654
No 10
>TIGR00956 3a01205 Pleiotropic Drug Resistance (PDR) Family protein.
Probab=100.00 E-value=3.9e-72 Score=743.72 Aligned_cols=559 Identities=24% Similarity=0.357 Sum_probs=460.6
Q ss_pred ceeeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCceeeEEEECCccCCCCCCCceEEEEecCCCCCCCCCH
Q 000997 147 KLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVPPRTSAYVSQQDWQVAEMTV 226 (1194)
Q Consensus 147 ~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lTV 226 (1194)
++++|+|||+.++||++++|+|||||||||||++|+|+.++....+|+|.+||+++.. ..++.++||+|+|.+++.+||
T Consensus 775 ~~~iL~~vs~~i~~Ge~~aI~G~sGaGKSTLL~~Lag~~~~g~~~~G~I~i~G~~~~~-~~~~~i~yv~Q~~~~~~~~Tv 853 (1394)
T TIGR00956 775 KRVILNNVDGWVKPGTLTALMGASGAGKTTLLNVLAERVTTGVITGGDRLVNGRPLDS-SFQRSIGYVQQQDLHLPTSTV 853 (1394)
T ss_pred CcEeeeCCEEEEECCEEEEEECCCCCCHHHHHHHHhCCCCCCCcceeEEEECCEECCh-hhhcceeeecccccCCCCCCH
Confidence 3579999999999999999999999999999999999987433458999999998753 346789999999999999999
Q ss_pred HHHHHHhhhccCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhccCcchhHHHHHHHHHhCCcccccccccCccCCC
Q 000997 227 RETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEMLKG 306 (1194)
Q Consensus 227 ~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~k~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~ 306 (1194)
+|||.|+++++.+... . . .+...+++++++.+||.+++|+.||+.. .+
T Consensus 854 ~E~L~~~a~l~~~~~~-~------~------------------------~~~~~~v~~~l~~l~L~~~~d~~v~~~~-~~ 901 (1394)
T TIGR00956 854 RESLRFSAYLRQPKSV-S------K------------------------SEKMEYVEEVIKLLEMESYADAVVGVPG-EG 901 (1394)
T ss_pred HHHHHHHHHhCCCCCC-C------H------------------------HHHHHHHHHHHHHcCChhhCCCeeCCCC-CC
Confidence 9999998876532110 0 0 0112358899999999999999999654 38
Q ss_pred CChhhhhHHHHHHHHhCCCc-EeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEcCC-
Q 000997 307 ISGGQKKRLTTGELLVGPAR-VLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEG- 384 (1194)
Q Consensus 307 LSGGqkqRvsia~al~~~~~-vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~~G- 384 (1194)
|||||||||+||++|+.+|+ ||||||||||||+.++..|++.|+++++ .++|+|+++||+...+++.||+|++|++|
T Consensus 902 LSgGqrqRl~Ia~aL~~~P~~iLlLDEPTsgLD~~~~~~i~~~L~~la~-~g~tvI~t~H~~~~~~~~~~D~vl~L~~GG 980 (1394)
T TIGR00956 902 LNVEQRKRLTIGVELVAKPKLLLFLDEPTSGLDSQTAWSICKLMRKLAD-HGQAILCTIHQPSAILFEEFDRLLLLQKGG 980 (1394)
T ss_pred CCHHHhhHHHHHHHHHcCCCeEEEEcCCCCCCCHHHHHHHHHHHHHHHH-cCCEEEEEecCCCHHHHHhcCEEEEEcCCC
Confidence 99999999999999999997 9999999999999999999999999976 47788888988888888999999999997
Q ss_pred eEEEecCh----hhHHHHHHhcCC-CCCCCCChhHHHHhhcCcccccccccCCCCCCcCCChhHHHHHHHhchhccchHH
Q 000997 385 QIVYQGPR----VSVLDFFASMGF-SCPKRKNVADFLQEVTSKKDQEQYWSNPYLPYRYISPGKFAEAFHSYHTGKNLSE 459 (1194)
Q Consensus 385 ~iv~~G~~----~~~~~~F~~~G~-~cp~~~~~adfl~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 459 (1194)
+++|+|+. +++.+||+++|+ +||+..|||||+.++.+...... ...++.+.|+.+...+...+
T Consensus 981 ~iv~~G~~~~~~~~~~~yf~~~G~~~~p~~~NpAd~~ldvi~~~~~~~------------~~~~~~~~~~~s~~~~~~~~ 1048 (1394)
T TIGR00956 981 QTVYFGDLGENSHTIINYFEKHGAPKCPEDANPAEWMLEVIGAAPGAH------------ANQDYHEVWRNSSEYQAVKN 1048 (1394)
T ss_pred EEEEECCcccccchHHHHHHhcCCCCCCCCCCHHHHHHHHhhcccccc------------hhccHHHHHhcCHHHHHHHH
Confidence 99999997 678999999996 99999999999999876432110 11245666766655444333
Q ss_pred hhcC---CccccCCCcCcccCCCCCCcHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHcccCCCCCccCc
Q 000997 460 ELAV---PFDRRFNHPAALSTSKYGEKRSELLKTSFNWQLLLMKRNSFIYVFKFIQLLIVALITMTVFFRTTMHHKTIDD 536 (1194)
Q Consensus 460 ~~~~---~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~R~~~~~~r~~~~~~~~~~~~~~~ali~g~vf~~~~~~~~~~~~ 536 (1194)
++.. +.............++|..+++.|+..+++|.++..+|++.+...|+++.+++|+++|++||+.+.+ ..+
T Consensus 1049 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~q~~~l~~R~~~~~~R~~~~~~~r~~~~i~~~l~~G~~f~~~~~~---~~~ 1125 (1394)
T TIGR00956 1049 ELDRLEAELSKAEDDNDPDALSKYAASLWYQFKLVLWRTFQQYWRTPDYLYSKFFLTIFAALFIGFTFFKVGTS---LQG 1125 (1394)
T ss_pred HHHHhhcccccCccccccccccccCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHhCCCCC---HHH
Confidence 2211 1111100001112246889999999999999999999999999999999999999999999998753 234
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHhcchh-hhhhccccccchhhHHHHHHHHHhhHHHHhhhHhhheeeeecccccc
Q 000997 537 GGLYLGALYFSMVIILFNGFTEVSMLVAKLPV-LYKHRDLHFYPSWVYTIPSWALSIPTSLIESGFWVAVTYYVIGYDPN 615 (1194)
Q Consensus 537 ~~~~~g~lf~~l~~~~~~~~~~~~~~~~~~~v-~~k~r~~~~y~~~ay~l~~~~~~iP~~~i~~~i~~~i~Y~~~gl~~~ 615 (1194)
.+..+|++|+.+++..+.....++.++.++.+ ++|||..++|+.++|++++++.++|+.++.+++|.+++||++|+.++
T Consensus 1126 i~~~~g~~f~~~~~~~~~~~~~~~~f~~~r~~~~~RE~~s~~Y~~~~y~~a~~l~elP~~~~~~~if~~i~Y~~~Gl~~~ 1205 (1394)
T TIGR00956 1126 LQNQMFAVFMATVLFNPLIQQYLPPFVAQRDLYEVRERPSRTFSWLAFIAAQITVEIPYNLVAGTIFFFIWYYPVGFYWN 1205 (1394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHhheeecccccCc
Confidence 45567888887766555544555666677776 49999999999999999999999999999999999999999999887
Q ss_pred HHH-------HHHHHHHHHHHHHHHHHHHHHHHHcccChHHHHHHHHHHHHHHHHHhhccccCCCcchhHHHHHhhcHHH
Q 000997 616 VVR-------FSRQLLLYFFLHQMSIGLFRVIGSLGRNMIVANTFGSFAMLVVMALGGFIISRDSIPKWWIWGFWVSPLM 688 (1194)
Q Consensus 616 ~~~-------f~~~~l~~~~~~~~~~~l~~~i~~~~~~~~va~~~~~~~~l~~~l~~Gf~i~~~~ip~~~~w~~~isp~~ 688 (1194)
+.. |+.++++.++...++.+++.++++++++..+|..+++++..++++|+||+++.+.||.||+|++|+||+.
T Consensus 1206 ~~~~~~~~~~f~~~~~~~~~~~~~~~s~g~~~~~~~~~~~~a~~~~~~~~~~~~lf~G~~~~~~~ip~~~~w~~~~sp~~ 1285 (1394)
T TIGR00956 1206 ASKTGQVHERGVLFWLLSTMFFLYFSTLGQMVISFNPNADNAAVLASLLFTMCLSFCGVLAPPSRMPGFWIFMYRCSPFT 1285 (1394)
T ss_pred ccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHCCcHHHHHHHHHHHHHHHHHhccccCChhHCcHHHhHHHhcCHHH
Confidence 755 9999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhhcCCcccccCC-------------------------------C---CC----CchhHHHhhhcCCCCCCc
Q 000997 689 YAQNAASVNEFLGHSWDKKAG-------------------------------N---SN----FSLGEAILRQRSLFPESY 730 (1194)
Q Consensus 689 y~~~al~~nef~~~~~~~~~~-------------------------------~---~~----~~~g~~~l~~~~~~~~~~ 730 (1194)
|++++++.|+|.+....|... + .+ ...|+++|+..++....
T Consensus 1286 y~~~~l~~~~~~~~~~~C~~~e~~~f~pp~~~tC~~y~~~~~~~~~G~l~~~~a~~~C~yC~~~~~~~~l~~~~~~~~~- 1364 (1394)
T TIGR00956 1286 YLVQALLSTGLADVPVTCKVKELLTFNPPSGQTCGEYMKPYLENAGGYLLNPNATDSCSFCQYSYTNDFLEPISSKYSG- 1364 (1394)
T ss_pred HHHHHHHHHHcCCCeeecCccccceecCCCCCCHHHHHHHHHhhCCcEeeCCCCCCCCCcCCCCCHHHHHHHcCCcccc-
Confidence 999999999998876544221 0 01 35788899888776544
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 000997 731 WYWIGVGAMLGYTLLFNALFTFFLSYL 757 (1194)
Q Consensus 731 ~~w~~~g~ll~~~~~f~~l~~~~l~~~ 757 (1194)
.|.+++++++|.+++ ++.++++.|.
T Consensus 1365 -~w~~~~i~~~~~~~~-~~~~~~l~~~ 1389 (1394)
T TIGR00956 1365 -RWRNFGIFIAFIFFN-IIATVFFYWL 1389 (1394)
T ss_pred -cccchhhhhHHHHHH-HHHHHhhheE
Confidence 589999999999888 6666666664
No 11
>KOG0054 consensus Multidrug resistance-associated protein/mitoxantrone resistance protein, ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=1.8e-72 Score=712.21 Aligned_cols=756 Identities=21% Similarity=0.257 Sum_probs=407.8
Q ss_pred ceeeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCceeeEEEECCccCCCCCCCceEEEEecCCCCCCCCCH
Q 000997 147 KLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVPPRTSAYVSQQDWQVAEMTV 226 (1194)
Q Consensus 147 ~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lTV 226 (1194)
..+.|+|||+.|++|++++|+||.|||||+||.+|.|.++. .+|+|.++| .+|||||++|++ +.||
T Consensus 533 ~~~tL~dIn~~i~~G~lvaVvG~vGsGKSSLL~AiLGEm~~---~sG~v~v~g----------siaYv~Q~pWI~-ngTv 598 (1381)
T KOG0054|consen 533 PEPTLKDINFEIKKGQLVAVVGPVGSGKSSLLSAILGEMPK---LSGSVAVNG----------SVAYVPQQPWIQ-NGTV 598 (1381)
T ss_pred CcccccceeEEecCCCEEEEECCCCCCHHHHHHHHhcCccc---ccceEEEcC----------eEEEeccccHhh-CCcH
Confidence 34489999999999999999999999999999999999875 499999999 589999999955 5699
Q ss_pred HHHHHHhhhccCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhccCcchhHHHHHHHHHhCCcccccccccCccCCC
Q 000997 227 RETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEMLKG 306 (1194)
Q Consensus 227 ~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~k~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~ 306 (1194)
||||.|+..+. ..+|+.+.++|..++|..+.|++| .|.||++++ +
T Consensus 599 reNILFG~~~d--~~rY~~Vi~aC~L~~Dle~Lp~GD--------------------------------~TeIGErGi-n 643 (1381)
T KOG0054|consen 599 RENILFGSPYD--EERYDKVIKACALKKDLEILPFGD--------------------------------LTEIGERGI-N 643 (1381)
T ss_pred HHhhhcCcccc--HHHHHHHHHHccCHhHHhhcCCCC--------------------------------cceecCCcc-C
Confidence 99999987664 578999999998888877777766 499998776 7
Q ss_pred CChhhhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEcCCeE
Q 000997 307 ISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEGQI 386 (1194)
Q Consensus 307 LSGGqkqRvsia~al~~~~~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~~G~i 386 (1194)
|||||||||++|||+|+++||++||+|.|++|+++..+|++.+-. ..++++|+|.++| .-+....+|.|++|++|+|
T Consensus 644 LSGGQKqRIsLARAVY~~adIYLLDDplSAVDahvg~~if~~ci~--~~L~~KT~ILVTH-ql~~L~~ad~Iivl~~G~I 720 (1381)
T KOG0054|consen 644 LSGGQKQRISLARAVYQDADIYLLDDPLSAVDAHVGKHIFEECIR--GLLRGKTVILVTH-QLQFLPHADQIIVLKDGKI 720 (1381)
T ss_pred CcHhHHHHHHHHHHHhccCCEEEEcCcchhhhHhhhHHHHHHHHH--hhhcCCEEEEEeC-chhhhhhCCEEEEecCCeE
Confidence 999999999999999999999999999999999999999986663 2345555665666 5677888999999999999
Q ss_pred EEecChhhHHH---HHHhcCCCCCCCCChhHHHHhhcCcccccccccCCCCCCcCCChhHHHHHHHhchhccchHHhhcC
Q 000997 387 VYQGPRVSVLD---FFASMGFSCPKRKNVADFLQEVTSKKDQEQYWSNPYLPYRYISPGKFAEAFHSYHTGKNLSEELAV 463 (1194)
Q Consensus 387 v~~G~~~~~~~---~F~~~G~~cp~~~~~adfl~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 463 (1194)
...|+++|+.+ +|+++ . .+.....+.. .....+.......+. +. +.........+. .
T Consensus 721 ~~~Gty~el~~~~~~~~~l-~------------~~~~~~~~~~---~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~-~- 780 (1381)
T KOG0054|consen 721 VESGTYEELLKSGGDFAEL-A------------HEEESEQEEE---ASEKDLESGESSRES-ES-RSLESLSSEEEK-S- 780 (1381)
T ss_pred ecccCHHHHHhcchhHHHH-h------------hccchhhccc---cccccccccccccch-hh-hhhhhhcccccc-c-
Confidence 99999999983 33332 0 0000000000 000000000000000 00 000000000000 0
Q ss_pred CccccCCCcCccc---CCCCCCcHHHHHHHHHHHHHHHHhcchhHHH-HHHHHHHHHHHHHHHHHc-ccCCCCC---cc-
Q 000997 464 PFDRRFNHPAALS---TSKYGEKRSELLKTSFNWQLLLMKRNSFIYV-FKFIQLLIVALITMTVFF-RTTMHHK---TI- 534 (1194)
Q Consensus 464 ~~~~~~~~~~~~~---~~~~~~s~~~~~~~~~~R~~~~~~r~~~~~~-~~~~~~~~~ali~g~vf~-~~~~~~~---~~- 534 (1194)
...+. .+.... ....+.-.|.- .+.+........... ..+.+.....+.+++-|| ..+.+.. ..
T Consensus 781 ~~~~~--~~~~~~~~ee~~~G~v~~~v-----Y~~Y~~a~~g~~~~~~~~~~~v~~~~~~~~~~~WLs~W~~~~~~~~~~ 853 (1381)
T KOG0054|consen 781 KDEKE--EEDKLVQEEERETGKVSWSV-----YKKYIKAAGGFLLVLLILLLFVLTQVLQIASNYWLSYWTDDGEDNGTT 853 (1381)
T ss_pred ccccc--hhhHHHHHHHHhcCEeeHHH-----HHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccccc
Confidence 00000 000000 00001111111 111111111111111 112222222233333232 2221111 10
Q ss_pred -CcchhHHHHHHHHHHHHH-HHHHHHHHHHHhcchhhhhhccccccchhhHHHHHHHHHhhHHHHhhhHhhheeeeeccc
Q 000997 535 -DDGGLYLGALYFSMVIIL-FNGFTEVSMLVAKLPVLYKHRDLHFYPSWVYTIPSWALSIPTSLIESGFWVAVTYYVIGY 612 (1194)
Q Consensus 535 -~~~~~~~g~lf~~l~~~~-~~~~~~~~~~~~~~~v~~k~r~~~~y~~~ay~l~~~~~~iP~~~i~~~i~~~i~Y~~~gl 612 (1194)
.+...|.+++.+..+... +..+..+..+...... .+..| -.+-.-+...|++++++.--.
T Consensus 854 ~~~~~~~~~vY~~l~~~~~~~~~~rs~~~~~~~l~a---S~~Lh------~~ml~~Ilrapm~FFdtTP~G--------- 915 (1381)
T KOG0054|consen 854 TVSTSFYLGVYALLGVASSLLTLLRSFLFAKGGLKA---SRKLH------DKLLNSILRAPMSFFDTTPTG--------- 915 (1381)
T ss_pred CCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHH------HHHHHHHHhCcchhcCCCCcc---------
Confidence 122333333222111111 1111111111110000 00000 001112223333333222111
Q ss_pred cccHHHHHHHHHH-----HHHHHHHHHHHHHHHHHcccChHHHHHHHHHHHHHHHHHhhccccCCCcchhHHHHHhhcHH
Q 000997 613 DPNVVRFSRQLLL-----YFFLHQMSIGLFRVIGSLGRNMIVANTFGSFAMLVVMALGGFIISRDSIPKWWIWGFWVSPL 687 (1194)
Q Consensus 613 ~~~~~~f~~~~l~-----~~~~~~~~~~l~~~i~~~~~~~~va~~~~~~~~l~~~l~~Gf~i~~~~ip~~~~w~~~isp~ 687 (1194)
+-..||..+.-. .+....+...+..+++.+.- ++. ..+.++++.+ | +.++||.--.
T Consensus 916 -RILNRFSkD~~~vD~~Lp~~~~~~~~~~~~~l~~~~v---i~~-~~P~fli~~~------------p--l~v~~~~~~~ 976 (1381)
T KOG0054|consen 916 -RILNRFSKDIDTVDVLLPFTLEFFLQSLLNVLGILVV---ISY-VTPWFLIAII------------P--LGVIYYFVQR 976 (1381)
T ss_pred -chhhhcccchHHHHHhhHHHHHHHHHHHHHHHHHHHH---hhH-HhHHHHHHHH------------H--HHHHHHHHHH
Confidence 113444443321 11111111111111111110 000 0000000000 0 0111111111
Q ss_pred HHHHHHHHHhhhcCCc---------------ccccCCCCCCchhHHHhhhcCCCCCCcc------HHHHHHH-HHHHHHH
Q 000997 688 MYAQNAASVNEFLGHS---------------WDKKAGNSNFSLGEAILRQRSLFPESYW------YWIGVGA-MLGYTLL 745 (1194)
Q Consensus 688 ~y~~~al~~nef~~~~---------------~~~~~~~~~~~~g~~~l~~~~~~~~~~~------~w~~~g~-ll~~~~~ 745 (1194)
+|...+--+....+.. .....-+.....-.......+.....++ .|.++-. +++-.++
T Consensus 977 ~Y~~tsReLkRLesitRSPi~sh~~Etl~GlsTIRAf~~~~rf~~~~~~~~D~~~~~~f~~~~a~RWla~Rle~ig~~~v 1056 (1381)
T KOG0054|consen 977 YYLATSRELKRLESITRSPIYSHFSETLQGLSTIRAFGKEERFIQENDELIDENSRAFFLSISANRWLAVRLELLGNLVV 1056 (1381)
T ss_pred HHHHHhHHHHHhhhcccchHHHhHHHHhcCcceeeeccccHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2222211111111111 0000000000111111111111111111 2444332 1111222
Q ss_pred HHHHHHHHHHhcCCCCCcccee--ch-----------------hhhhhHhhhhcCcchhHHhhhhhhcccCccCcccccC
Q 000997 746 FNALFTFFLSYLNPLGKQQAVV--SK-----------------KELQERDRRRKGENVVIELREYLQRSSSLNGKYFKQK 806 (1194)
Q Consensus 746 f~~l~~~~l~~~~~~~~~~~~~--~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 806 (1194)
+.+.+...+........+.... +. .+......++..+......+.+.......+++.||..
T Consensus 1057 ~~~al~~vl~~~~~~~~g~vGLslsyal~lt~~l~~~vR~~~elEn~m~SVERv~eY~~~~~E~p~~~~~~~pp~~WP~~ 1136 (1381)
T KOG0054|consen 1057 LIAALFAVLLPSGLISPGLVGLSLSYALQLTGLLQWLVRQSSELENNMVSVERVLEYTDIPSEAPLEIEESRPPPSWPSK 1136 (1381)
T ss_pred HHHHHHHHHccCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhhhHHHHHhcCCCCCCCCCcCCCCCCCCCCC
Confidence 2211111111111010111000 00 0000000000000000000000001111134467777
Q ss_pred CcccccccceeEeecceeeeecccccccccccccceEEeeeeeEEEeCCcEEEEEccCCCChHHHHhhhcCCCCCCeeEE
Q 000997 807 GMVLPFQPLSMAFGNINYFVDVPVELKQEGVLEDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEG 886 (1194)
Q Consensus 807 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G 886 (1194)
| .+.|+|++..+. .+-..+|||||++|+|||++||+|++|||||||+++|.+... +.+|
T Consensus 1137 G--------~I~f~~~~~RYr-----------p~lp~VLk~is~~I~p~eKVGIVGRTGaGKSSL~~aLFRl~e--~~~G 1195 (1381)
T KOG0054|consen 1137 G--------EIEFEDLSLRYR-----------PNLPLVLKGISFTIKPGEKVGIVGRTGAGKSSLILALFRLVE--PAEG 1195 (1381)
T ss_pred C--------eEEEEEeEEEeC-----------CCCcchhcCceEEEcCCceEEEeCCCCCCHHHHHHHHHHhcC--ccCC
Confidence 6 466777665542 133579999999999999999999999999999999999876 4689
Q ss_pred EEEEcCccCCh---hcccceeeEeecCCCCCCCCcHHHHHHHHhhhcCCCcCcHHHHHHHHHHHHHHcCCCcccCC----
Q 000997 887 DIYISGYPKRQ---ETFARISGYCEQNDIHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGA---- 959 (1194)
Q Consensus 887 ~i~i~g~~~~~---~~~~~~~gyv~Q~~~~~~~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~---- 959 (1194)
+|.|||.++.+ .+.|++++.+||||.+|.+ |+|.|| +...+..++.++++++..+|.+....
T Consensus 1196 ~I~IDgvdI~~igL~dLRsrlsIIPQdPvLFsG-TvR~NL----------DPf~e~sD~~IW~ALe~~~Lk~~v~~~p~~ 1264 (1381)
T KOG0054|consen 1196 EILIDGVDISKIGLHDLRSRLSIIPQDPVLFSG-TVRFNL----------DPFDEYSDDEIWEALERCQLKDVVSSLPGG 1264 (1381)
T ss_pred eEEEcCeecccccHHHHHhcCeeeCCCCceecC-cccccc----------CcccccCHHHHHHHHHHhChHHHHhhCCcC
Confidence 99999998754 5678899999999999876 888887 33344556678999999888654422
Q ss_pred ---cccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhc
Q 000997 960 ---LIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESF 1036 (1194)
Q Consensus 960 ---~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~~ 1036 (1194)
.+. +++.++|.||||.+|+||||+++++||+|||+|+++|+++...|+++||+-. +++|||+++|+.+ ....+
T Consensus 1265 Ld~~v~-egG~N~SvGQRQLlCLARALLr~skILvLDEATAsVD~~TD~lIQ~tIR~~F-~dcTVltIAHRl~--TVmd~ 1340 (1381)
T KOG0054|consen 1265 LDSEVS-EGGENFSVGQRQLLCLARALLRKSKILVLDEATASVDPETDALIQKTIREEF-KDCTVLTIAHRLN--TVMDS 1340 (1381)
T ss_pred CCceec-CCCccCChHHHHHHHHHHHHhccCCEEEEecccccCChHHHHHHHHHHHHHh-cCCeEEEEeeccc--hhhhc
Confidence 222 3457899999999999999999999999999999999999999999999964 5899999999976 45678
Q ss_pred CeEEEEccCcEEEEeCCCC
Q 000997 1037 DELLFMKRGGELIYAGPLG 1055 (1194)
Q Consensus 1037 d~~~~l~~gG~~~~~g~~~ 1055 (1194)
|||+||++ |+++.+|.+.
T Consensus 1341 DrVlVld~-G~v~EfdsP~ 1358 (1381)
T KOG0054|consen 1341 DRVLVLDA-GRVVEFDSPA 1358 (1381)
T ss_pred CeEEEeeC-CeEeecCChH
Confidence 99999985 7999888763
No 12
>TIGR01257 rim_protein retinal-specific rim ABC transporter. This model describes the photoreceptor protein (rim protein) in eukaryotes. It is the member of ABC transporter superfamily. Rim protein is a membrane glycoprotein which is localized in the photoreceptor outer segment discs. Mutation/s in its genetic loci is implicated in the recessive Stargardt's disease.
Probab=100.00 E-value=1.9e-70 Score=722.09 Aligned_cols=209 Identities=28% Similarity=0.414 Sum_probs=181.7
Q ss_pred eEEeeeeeEEEeCCcEEEEEccCCCChHHHHhhhcCCCCCCeeEEEEEEcCccCCh--hcccceeeEeecCCCCCCCCcH
Q 000997 842 LQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ--ETFARISGYCEQNDIHSPGLTV 919 (1194)
Q Consensus 842 ~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~--~~~~~~~gyv~Q~~~~~~~lTv 919 (1194)
+.+|+|||+.|++||++||+||||||||||+++|+|... +.+|+|.++|+++.. ...++.+|||+|++.+++.+|+
T Consensus 1952 ~~aL~~ISf~I~~GEi~gLLG~NGAGKTTLlkmL~Gll~--ptsG~I~i~G~~i~~~~~~~r~~IGy~pQ~~~L~~~LTv 2029 (2272)
T TIGR01257 1952 SPAVDRLCVGVRPGECFGLLGVNGAGKTTTFKMLTGDTT--VTSGDATVAGKSILTNISDVHQNMGYCPQFDAIDDLLTG 2029 (2272)
T ss_pred ceEEEeeEEEEcCCcEEEEECCCCCcHHHHHHHHhCCCC--CCccEEEECCEECcchHHHHhhhEEEEeccccCCCCCCH
Confidence 579999999999999999999999999999999999876 468999999988642 2345679999999999999999
Q ss_pred HHHHHHHhhhcCCCcCcHHHHHHHHHHHHHHcCCCcccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCC
Q 000997 920 LESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSGL 999 (1194)
Q Consensus 920 ~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEPTsgL 999 (1194)
+|++.+.+.++. .+.++.++.++++++.++|.+.+|..+ +.|||||||||+||+||+.+|+||||||||+||
T Consensus 2030 ~E~L~l~a~l~g---~~~~~~~~~v~~lLe~lgL~~~~dk~~-----~~LSGGqKqRLslA~ALi~~P~VLLLDEPTsGL 2101 (2272)
T TIGR01257 2030 REHLYLYARLRG---VPAEEIEKVANWSIQSLGLSLYADRLA-----GTYSGGNKRKLSTAIALIGCPPLVLLDEPTTGM 2101 (2272)
T ss_pred HHHHHHHHHhcC---CCHHHHHHHHHHHHHHcCCHHHhcCCh-----hhCCHHHHHHHHHHHHHhcCCCEEEEECCCCCC
Confidence 999998877653 233444567889999999998888765 579999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCeEEEEccCcEEEEeCCCCCchhHHHHHHH
Q 000997 1000 DARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLGSKSCELIKYFE 1066 (1194)
Q Consensus 1000 D~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~~~~~~~~~~~f~ 1066 (1194)
|+.+++.+++.|++++++|+|||+|||+++ ++...|||+++|. +|++++.|+. +++...|.
T Consensus 2102 Dp~sr~~l~~lL~~l~~~g~TIILtTH~me-e~e~lcDrV~IL~-~G~i~~~Gs~----q~Lk~~~g 2162 (2272)
T TIGR01257 2102 DPQARRMLWNTIVSIIREGRAVVLTSHSME-ECEALCTRLAIMV-KGAFQCLGTI----QHLKSKFG 2162 (2272)
T ss_pred CHHHHHHHHHHHHHHHhCCCEEEEEeCCHH-HHHHhCCEEEEEE-CCEEEEECCH----HHHHHHhC
Confidence 999999999999999878999999999986 5777899999998 5899999986 34544443
No 13
>PLN03130 ABC transporter C family member; Provisional
Probab=100.00 E-value=2.2e-67 Score=704.88 Aligned_cols=211 Identities=22% Similarity=0.299 Sum_probs=175.8
Q ss_pred eeEeecceeeeecccccccccccccceEEeeeeeEEEeCCcEEEEEccCCCChHHHHhhhcCCCCCCeeEEEEEEcCccC
Q 000997 816 SMAFGNINYFVDVPVELKQEGVLEDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPK 895 (1194)
Q Consensus 816 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 895 (1194)
.+.|+|+++.++. +.+.+|+|||++|+|||++||+|+||||||||+++|.|... +.+|+|.|||.++
T Consensus 1237 ~I~f~nVsf~Y~~-----------~~~~VL~~is~~I~~GekVaIVGrSGSGKSTLl~lL~rl~~--p~~G~I~IDG~dI 1303 (1622)
T PLN03130 1237 SIKFEDVVLRYRP-----------ELPPVLHGLSFEISPSEKVGIVGRTGAGKSSMLNALFRIVE--LERGRILIDGCDI 1303 (1622)
T ss_pred cEEEEEEEEEeCC-----------CCCceecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCcCC--CCCceEEECCEec
Confidence 5788888877631 22469999999999999999999999999999999999876 5689999999987
Q ss_pred Ch---hcccceeeEeecCCCCCCCCcHHHHHHHHhhhcCCCcCcHHHHHHHHHHHHHHcCCCcc-------cCCcccCCC
Q 000997 896 RQ---ETFARISGYCEQNDIHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSL-------SGALIGLPG 965 (1194)
Q Consensus 896 ~~---~~~~~~~gyv~Q~~~~~~~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~-------~~~~~~~~~ 965 (1194)
.+ ..+++.++||||++.++.+ |+||||.+.. ..+ ++.++++++..++.+. .|+.++..
T Consensus 1304 ~~i~l~~LR~~IsiVpQdp~LF~G-TIreNLd~~~------~~t----deei~~Al~~a~l~~~I~~lp~GLdt~Vge~- 1371 (1622)
T PLN03130 1304 SKFGLMDLRKVLGIIPQAPVLFSG-TVRFNLDPFN------EHN----DADLWESLERAHLKDVIRRNSLGLDAEVSEA- 1371 (1622)
T ss_pred ccCCHHHHHhccEEECCCCccccc-cHHHHhCcCC------CCC----HHHHHHHHHHcCcHHHHHhCccccCccccCC-
Confidence 53 5678899999999999976 9999996531 112 2446777777776543 34445443
Q ss_pred CCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCeEEEEccC
Q 000997 966 INGLSTEQRKRLTIAVELVANPSIVFMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRG 1045 (1194)
Q Consensus 966 ~~~LSgGqrqrl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~g 1045 (1194)
+.+||||||||+||||||+++|+||+||||||+||+.+...|++.|++.. +++|||+++|+++ ....||+|++|+ +
T Consensus 1372 G~nLSgGQrQrlaLARALLr~p~ILILDEATSaLD~~Te~~Iq~~I~~~~-~~~TvI~IAHRL~--tI~~~DrIlVLd-~ 1447 (1622)
T PLN03130 1372 GENFSVGQRQLLSLARALLRRSKILVLDEATAAVDVRTDALIQKTIREEF-KSCTMLIIAHRLN--TIIDCDRILVLD-A 1447 (1622)
T ss_pred CCCCCHHHHHHHHHHHHHHcCCCEEEEECCCCCCCHHHHHHHHHHHHHHC-CCCEEEEEeCChH--HHHhCCEEEEEE-C
Confidence 35799999999999999999999999999999999999999999999975 5899999999975 557799999998 4
Q ss_pred cEEEEeCCCC
Q 000997 1046 GELIYAGPLG 1055 (1194)
Q Consensus 1046 G~~~~~g~~~ 1055 (1194)
|+++..|++.
T Consensus 1448 G~IvE~Gt~~ 1457 (1622)
T PLN03130 1448 GRVVEFDTPE 1457 (1622)
T ss_pred CEEEEeCCHH
Confidence 8999999863
No 14
>PLN03232 ABC transporter C family member; Provisional
Probab=100.00 E-value=9.6e-67 Score=699.50 Aligned_cols=210 Identities=21% Similarity=0.283 Sum_probs=175.3
Q ss_pred eeEeecceeeeecccccccccccccceEEeeeeeEEEeCCcEEEEEccCCCChHHHHhhhcCCCCCCeeEEEEEEcCccC
Q 000997 816 SMAFGNINYFVDVPVELKQEGVLEDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPK 895 (1194)
Q Consensus 816 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 895 (1194)
.+.|+|+++.++. +.+.+|+|||++|+|||++||+|+||||||||+++|.|... +.+|+|.|||.++
T Consensus 1234 ~I~f~nVsf~Y~~-----------~~~~vL~~isl~I~~GekvaIVG~SGSGKSTL~~lL~rl~~--p~~G~I~IdG~di 1300 (1495)
T PLN03232 1234 SIKFEDVHLRYRP-----------GLPPVLHGLSFFVSPSEKVGVVGRTGAGKSSMLNALFRIVE--LEKGRIMIDDCDV 1300 (1495)
T ss_pred cEEEEEEEEEECC-----------CCCcccccceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCc--CCCceEEECCEEh
Confidence 5788888887631 23469999999999999999999999999999999999876 5689999999986
Q ss_pred C---hhcccceeeEeecCCCCCCCCcHHHHHHHHhhhcCCCcCcHHHHHHHHHHHHHHcCCCcc-------cCCcccCCC
Q 000997 896 R---QETFARISGYCEQNDIHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSL-------SGALIGLPG 965 (1194)
Q Consensus 896 ~---~~~~~~~~gyv~Q~~~~~~~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~-------~~~~~~~~~ 965 (1194)
. ...+++.++||||++.++++ |+||||.+.. +.+ ++.++++++..++.+. .|+.++..
T Consensus 1301 ~~i~~~~lR~~i~iVpQdp~LF~g-TIr~NL~~~~------~~s----deei~~al~~a~l~~~I~~lp~GLdt~v~e~- 1368 (1495)
T PLN03232 1301 AKFGLTDLRRVLSIIPQSPVLFSG-TVRFNIDPFS------EHN----DADLWEALERAHIKDVIDRNPFGLDAEVSEG- 1368 (1495)
T ss_pred hhCCHHHHHhhcEEECCCCeeeCc-cHHHHcCCCC------CCC----HHHHHHHHHHcCCHHHHHhCcCCCCceecCC-
Confidence 4 35678899999999999976 9999996431 122 2346777787777543 24445443
Q ss_pred CCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCeEEEEccC
Q 000997 966 INGLSTEQRKRLTIAVELVANPSIVFMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRG 1045 (1194)
Q Consensus 966 ~~~LSgGqrqrl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~g 1045 (1194)
+.+||||||||++|||||+++|+||+||||||+||+.+.+.|++.|++.. +++|||+|+|+++ ....||+|++|+ +
T Consensus 1369 G~~LSgGQrQrlaLARALLr~~~ILILDEATSaLD~~Te~~Iq~~L~~~~-~~~TvI~IAHRl~--ti~~~DrIlVL~-~ 1444 (1495)
T PLN03232 1369 GENFSVGQRQLLSLARALLRRSKILVLDEATASVDVRTDSLIQRTIREEF-KSCTMLVIAHRLN--TIIDCDKILVLS-S 1444 (1495)
T ss_pred CCCCCHHHHHHHHHHHHHHhCCCEEEEECCcccCCHHHHHHHHHHHHHHc-CCCEEEEEeCCHH--HHHhCCEEEEEE-C
Confidence 35799999999999999999999999999999999999999999999874 5899999999975 567799999998 4
Q ss_pred cEEEEeCCC
Q 000997 1046 GELIYAGPL 1054 (1194)
Q Consensus 1046 G~~~~~g~~ 1054 (1194)
|+++..|+.
T Consensus 1445 G~ivE~Gt~ 1453 (1495)
T PLN03232 1445 GQVLEYDSP 1453 (1495)
T ss_pred CEEEEECCH
Confidence 899999975
No 15
>COG1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase [General function prediction only]
Probab=100.00 E-value=8.8e-67 Score=606.67 Aligned_cols=474 Identities=26% Similarity=0.330 Sum_probs=358.6
Q ss_pred eeeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCC-CceeeEEEECCccCCCCCC-------CceEEEEecCCC
Q 000997 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHH-LQVSGKITYNGHGFKEFVP-------PRTSAYVSQQDW 219 (1194)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~-~~~~G~i~~~G~~~~~~~~-------~~~~~yv~Q~d~ 219 (1194)
..+++||||++.|||+++|+|.|||||||+.++|.|.+++. ...+|+|.++|.++..... .+.++||+|++.
T Consensus 22 ~~~v~~vsf~v~~GE~lgIvGESGsGKSt~a~~i~gll~~~~~~~~G~I~~~g~dl~~l~~~~~r~~rg~~Ia~i~Q~p~ 101 (539)
T COG1123 22 VPAVRDVSFEVEPGEILGIVGESGSGKSTLALALMGLLPEGGRITSGEVILDGRDLLGLSEREMRKLRGKRIAMIFQDPM 101 (539)
T ss_pred eeeeecceEEecCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcccceEEEECCcchhcCCHHHHHHhccccEEEEecCch
Confidence 57999999999999999999999999999999999999876 4568999999987654432 367999999974
Q ss_pred --CCCCCCHHHHHHHhhhccCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhccCcchhHHHHHHHHHhCCcccccc
Q 000997 220 --QVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADT 297 (1194)
Q Consensus 220 --~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~k~~~~~~~~~~~~~~~~l~~lgL~~~~dt 297 (1194)
+-|-+||.+.|.-..+.++... ..+...++.++|+..||++....
T Consensus 102 ~slnP~~tIg~Qi~E~~~~h~~~~---------------------------------~~ea~~~a~elL~~Vgl~~~~~~ 148 (539)
T COG1123 102 TSLNPVMTIGDQIREALRLHGKGS---------------------------------RAEARKRAVELLEQVGLPDPERR 148 (539)
T ss_pred hhcCchhhHHHHHHHHHHHhcccc---------------------------------HHHHHHHHHHHHHHcCCCChhhh
Confidence 5666899998876555443221 01123457889999999986654
Q ss_pred cccCccCCCCChhhhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCe
Q 000997 298 LVGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDD 377 (1194)
Q Consensus 298 ~vg~~~~~~LSGGqkqRvsia~al~~~~~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~ 377 (1194)
+.+.+.|||||||||.||+||+.+|++|++||||++||+.++.+|.+.|+++.+.. ++.++.++|+..-+.+++|+
T Consensus 149 ---~~yPheLSGG~rQRv~iAmALa~~P~LLIaDEPTTaLDvt~q~qIL~llk~l~~e~-g~a~l~ITHDl~Vva~~aDr 224 (539)
T COG1123 149 ---DRYPHQLSGGMRQRVMIAMALALKPKLLIADEPTTALDVTTQAQILDLLKDLQREL-GMAVLFITHDLGVVAELADR 224 (539)
T ss_pred ---ccCCcccCchHHHHHHHHHHHhCCCCEEEECCCccccCHHHHHHHHHHHHHHHHHc-CcEEEEEcCCHHHHHHhcCe
Confidence 56788999999999999999999999999999999999999999999999998764 56777799999999999999
Q ss_pred EEEEcCCeEEEecChhhHHHHHHhcCCCCCCCCChhHHHHhhcCcccccccccCCCCCCcCCChhHHHHHHHhchhccch
Q 000997 378 VILLSEGQIVYQGPRVSVLDFFASMGFSCPKRKNVADFLQEVTSKKDQEQYWSNPYLPYRYISPGKFAEAFHSYHTGKNL 457 (1194)
Q Consensus 378 vilL~~G~iv~~G~~~~~~~~F~~~G~~cp~~~~~adfl~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 457 (1194)
|+||++|++++.|+.+++..- +..||+. . +
T Consensus 225 v~Vm~~G~iVE~G~~~~i~~~---------------------------------p~hpYT~---~--------------L 254 (539)
T COG1123 225 VVVMYKGEIVETGPTEEILSN---------------------------------PQHPYTR---G--------------L 254 (539)
T ss_pred EEEEECCEEEEecCHHHHHhc---------------------------------cCCcccH---H--------------H
Confidence 999999999999999988531 1112210 0 0
Q ss_pred HHhhcCCccccCCCcCcccCCCCCCcHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHcccCCCCCccCcc
Q 000997 458 SEELAVPFDRRFNHPAALSTSKYGEKRSELLKTSFNWQLLLMKRNSFIYVFKFIQLLIVALITMTVFFRTTMHHKTIDDG 537 (1194)
Q Consensus 458 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~R~~~~~~r~~~~~~~~~~~~~~~ali~g~vf~~~~~~~~~~~~~ 537 (1194)
... .|
T Consensus 255 l~a--~p------------------------------------------------------------------------- 259 (539)
T COG1123 255 LAA--VP------------------------------------------------------------------------- 259 (539)
T ss_pred Hhh--CC-------------------------------------------------------------------------
Confidence 000 00
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhcchhhhhhccccccchhhHHHHHHHHHhhHHHHhhhHhhheeeeeccccccHH
Q 000997 538 GLYLGALYFSMVIILFNGFTEVSMLVAKLPVLYKHRDLHFYPSWVYTIPSWALSIPTSLIESGFWVAVTYYVIGYDPNVV 617 (1194)
Q Consensus 538 ~~~~g~lf~~l~~~~~~~~~~~~~~~~~~~v~~k~r~~~~y~~~ay~l~~~~~~iP~~~i~~~i~~~i~Y~~~gl~~~~~ 617 (1194)
.....+..
T Consensus 260 ------------------------------~~~~~~~~------------------------------------------ 267 (539)
T COG1123 260 ------------------------------RLGDEKII------------------------------------------ 267 (539)
T ss_pred ------------------------------Cccccccc------------------------------------------
Confidence 00000000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcccChHHHHHHHHHHHHHHHHHhhccccCCCcchhHHHHHhhcHHHHHHHHHHHh
Q 000997 618 RFSRQLLLYFFLHQMSIGLFRVIGSLGRNMIVANTFGSFAMLVVMALGGFIISRDSIPKWWIWGFWVSPLMYAQNAASVN 697 (1194)
Q Consensus 618 ~f~~~~l~~~~~~~~~~~l~~~i~~~~~~~~va~~~~~~~~l~~~l~~Gf~i~~~~ip~~~~w~~~isp~~y~~~al~~n 697 (1194)
T Consensus 268 -------------------------------------------------------------------------------- 267 (539)
T COG1123 268 -------------------------------------------------------------------------------- 267 (539)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhcCCcccccCCCCCCchhHHHhhhcCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccceechhhhhhHhh
Q 000997 698 EFLGHSWDKKAGNSNFSLGEAILRQRSLFPESYWYWIGVGAMLGYTLLFNALFTFFLSYLNPLGKQQAVVSKKELQERDR 777 (1194)
Q Consensus 698 ef~~~~~~~~~~~~~~~~g~~~l~~~~~~~~~~~~w~~~g~ll~~~~~f~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 777 (1194)
+. .
T Consensus 268 ------~~--~--------------------------------------------------------------------- 270 (539)
T COG1123 268 ------RL--P--------------------------------------------------------------------- 270 (539)
T ss_pred ------cc--c---------------------------------------------------------------------
Confidence 00 0
Q ss_pred hhcCcchhHHhhhhhhcccCccCcccccCCcccccccceeEeecceeeeecccccccccccccceEEeeeeeEEEeCCcE
Q 000997 778 RRKGENVVIELREYLQRSSSLNGKYFKQKGMVLPFQPLSMAFGNINYFVDVPVELKQEGVLEDRLQLLVNVTGAFRPGVL 857 (1194)
Q Consensus 778 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~ 857 (1194)
. . . ... ...-++.+|++-.+..+..+. ....+...+++||||.+++||+
T Consensus 271 ----------~------~---~---~~~-------~~~ll~V~~l~k~y~~~~~~~--~~~~~~~~Av~~VSf~l~~GE~ 319 (539)
T COG1123 271 ----------R------R---G---PLR-------AEPLLSVRNLSKRYGSRKGLF--VRERGEVKAVDDVSFDLREGET 319 (539)
T ss_pred ----------c------c---c---ccc-------cCceeEeeeeeeeeccccccc--cccccceeeeeeeeeEecCCCE
Confidence 0 0 0 000 000011122211111100000 0001346799999999999999
Q ss_pred EEEEccCCCChHHHHhhhcCCCCCCeeEEEEEEcCccC--C---hhcccceeeEeecCCC--CCCCCcHHHHHHHHhhhc
Q 000997 858 TALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPK--R---QETFARISGYCEQNDI--HSPGLTVLESLLFSAWLR 930 (1194)
Q Consensus 858 ~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~--~---~~~~~~~~gyv~Q~~~--~~~~lTv~e~l~f~~~lr 930 (1194)
+||+|+||||||||.++|+|+.+ +.+|.|.++|.+. + ....++.+-+|+|++. +.|.+||++.+.-.....
T Consensus 320 lglVGeSGsGKSTlar~i~gL~~--P~~G~i~~~g~~~~~~~~~~~~~r~~~QmvFQdp~~SLnPr~tV~~~i~epL~~~ 397 (539)
T COG1123 320 LGLVGESGSGKSTLARILAGLLP--PSSGSIIFDGQDLDLTGGELRRLRRRIQMVFQDPYSSLNPRMTVGDILAEPLRIH 397 (539)
T ss_pred EEEECCCCCCHHHHHHHHhCCCC--CCCceEEEeCcccccccchhhhhhhheEEEEeCcccccCccccHHHHHHhHHhhh
Confidence 99999999999999999999987 4689999999762 1 1234566778888864 679999999998765443
Q ss_pred CCCcCcHHHHHHHHHHHHHHcCCCc-ccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHH
Q 000997 931 LPSEIELETQRAFVEEVMELVELTS-LSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSGLDARAAAIVMR 1009 (1194)
Q Consensus 931 ~~~~~~~~~~~~~v~~~l~~l~l~~-~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~ 1009 (1194)
.. ....++++++.++++.++|.. ..+.+ +.+||||||||++|||||+.+|++|++|||||.||+..+..|.+
T Consensus 398 ~~--~~~~~~~~rv~~ll~~VgL~~~~l~ry-----P~elSGGQrQRvaIARALa~~P~lli~DEp~SaLDvsvqa~Vln 470 (539)
T COG1123 398 GG--GSGAERRARVAELLELVGLPPEFLDRY-----PHELSGGQRQRVAIARALALEPKLLILDEPVSALDVSVQAQVLN 470 (539)
T ss_pred cc--cchHHHHHHHHHHHHHcCCCHHHHhcC-----chhcCcchhHHHHHHHHHhcCCCEEEecCCccccCHHHHHHHHH
Confidence 32 224566678999999999985 34443 36899999999999999999999999999999999999999999
Q ss_pred HHHHHHhC-CCEEEEEecCCcHHHHHhcCeEEEEccCcEEEEeCCC
Q 000997 1010 TVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1194)
Q Consensus 1010 ~l~~l~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~ 1054 (1194)
+|+++.++ |.|.|+|+||... +...|||++||. .|+++..||.
T Consensus 471 Ll~~lq~e~g~t~lfISHDl~v-V~~i~drv~vm~-~G~iVE~G~~ 514 (539)
T COG1123 471 LLKDLQEELGLTYLFISHDLAV-VRYIADRVAVMY-DGRIVEEGPT 514 (539)
T ss_pred HHHHHHHHhCCEEEEEeCCHHH-HHhhCceEEEEE-CCeEEEeCCH
Confidence 99999865 9999999999863 667899999998 5899999975
No 16
>TIGR00957 MRP_assoc_pro multi drug resistance-associated protein (MRP). This model describes multi drug resistance-associated protein (MRP) in eukaryotes. The multidrug resistance-associated protein is an integral membrane protein that causes multidrug resistance when overexpressed in mammalian cells. It belongs to ABC transporter superfamily. The protein topology and function was experimentally demonstrated by epitope tagging and immunofluorescence. Insertion of tags in the critical regions associated with drug efflux, abrogated its function. The C-terminal domain seem to highly conserved.
Probab=100.00 E-value=9.5e-65 Score=681.16 Aligned_cols=211 Identities=20% Similarity=0.235 Sum_probs=175.7
Q ss_pred eeEeecceeeeecccccccccccccceEEeeeeeEEEeCCcEEEEEccCCCChHHHHhhhcCCCCCCeeEEEEEEcCccC
Q 000997 816 SMAFGNINYFVDVPVELKQEGVLEDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPK 895 (1194)
Q Consensus 816 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 895 (1194)
.+.|+|+++.++. +...+|+|||++|+|||++||+|+||||||||+++|.|... +.+|+|.|||.++
T Consensus 1284 ~I~f~nVsf~Y~~-----------~~~~vL~~is~~I~~GekiaIVGrTGsGKSTL~~lL~rl~~--~~~G~I~IdG~dI 1350 (1522)
T TIGR00957 1284 RVEFRNYCLRYRE-----------DLDLVLRHINVTIHGGEKVGIVGRTGAGKSSLTLGLFRINE--SAEGEIIIDGLNI 1350 (1522)
T ss_pred cEEEEEEEEEeCC-----------CCcccccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCcc--CCCCeEEECCEEc
Confidence 5788898887732 12369999999999999999999999999999999999876 5689999999987
Q ss_pred Ch---hcccceeeEeecCCCCCCCCcHHHHHHHHhhhcCCCcCcHHHHHHHHHHHHHHcCCCcc-------cCCcccCCC
Q 000997 896 RQ---ETFARISGYCEQNDIHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSL-------SGALIGLPG 965 (1194)
Q Consensus 896 ~~---~~~~~~~gyv~Q~~~~~~~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~-------~~~~~~~~~ 965 (1194)
.. ..+++.++||||++.++.+ |+||||.... +.+ ++.++++++..++.+. .|+.++..
T Consensus 1351 ~~i~~~~LR~~i~iVpQdp~LF~g-TIr~NLdp~~------~~s----deei~~al~~a~l~~~I~~lp~GLdt~v~e~- 1418 (1522)
T TIGR00957 1351 AKIGLHDLRFKITIIPQDPVLFSG-SLRMNLDPFS------QYS----DEEVWWALELAHLKTFVSALPDKLDHECAEG- 1418 (1522)
T ss_pred cccCHHHHHhcCeEECCCCcccCc-cHHHHcCccc------CCC----HHHHHHHHHHcCcHHHHhhCccCCCceecCC-
Confidence 53 5678899999999999986 9999995211 122 2346778888777543 34445543
Q ss_pred CCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCeEEEEccC
Q 000997 966 INGLSTEQRKRLTIAVELVANPSIVFMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRG 1045 (1194)
Q Consensus 966 ~~~LSgGqrqrl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~g 1045 (1194)
..+||||||||+||||||+++|+||+||||||+||+++...|++.|++.. +++|||+|+|+++ ....+|+|++|+ +
T Consensus 1419 G~~LSgGQrQrl~LARALLr~~~ILiLDEaTSalD~~Te~~Iq~~l~~~~-~~~TvI~IAHRl~--ti~~~DrIlVld-~ 1494 (1522)
T TIGR00957 1419 GENLSVGQRQLVCLARALLRKTKILVLDEATAAVDLETDNLIQSTIRTQF-EDCTVLTIAHRLN--TIMDYTRVIVLD-K 1494 (1522)
T ss_pred CCcCCHHHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHc-CCCEEEEEecCHH--HHHhCCEEEEEE-C
Confidence 35799999999999999999999999999999999999999999999864 5899999999975 567899999998 5
Q ss_pred cEEEEeCCCC
Q 000997 1046 GELIYAGPLG 1055 (1194)
Q Consensus 1046 G~~~~~g~~~ 1055 (1194)
|+++..|++.
T Consensus 1495 G~IvE~G~~~ 1504 (1522)
T TIGR00957 1495 GEVAEFGAPS 1504 (1522)
T ss_pred CEEEEECCHH
Confidence 8999999863
No 17
>PTZ00265 multidrug resistance protein (mdr1); Provisional
Probab=100.00 E-value=1.8e-64 Score=670.63 Aligned_cols=216 Identities=20% Similarity=0.306 Sum_probs=176.3
Q ss_pred eeEeecceeeeecccccccccccccceEEeeeeeEEEeCCcEEEEEccCCCChHHHHhhhcCCCCCC-------------
Q 000997 816 SMAFGNINYFVDVPVELKQEGVLEDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGG------------- 882 (1194)
Q Consensus 816 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~------------- 882 (1194)
.+.|+|++|.++. .++.++|+|+||+|+||+++||+||||||||||+++|.|...+.
T Consensus 1165 ~I~f~nVsF~Y~~----------~~~~~vL~~lsl~i~~G~~vAIVG~SGsGKSTl~~LL~r~ydp~~~~~~~~~~~~~~ 1234 (1466)
T PTZ00265 1165 KIEIMDVNFRYIS----------RPNVPIYKDLTFSCDSKKTTAIVGETGSGKSTVMSLLMRFYDLKNDHHIVFKNEHTN 1234 (1466)
T ss_pred eEEEEEEEEECCC----------CCCCccccCeeEEEcCCCEEEEECCCCCCHHHHHHHHHHhCCCcccccccccccccc
Confidence 5889999988742 12346999999999999999999999999999999999976531
Q ss_pred ---------------------------------------eeEEEEEEcCccCC---hhcccceeeEeecCCCCCCCCcHH
Q 000997 883 ---------------------------------------IIEGDIYISGYPKR---QETFARISGYCEQNDIHSPGLTVL 920 (1194)
Q Consensus 883 ---------------------------------------~~~G~i~i~g~~~~---~~~~~~~~gyv~Q~~~~~~~lTv~ 920 (1194)
+.+|+|.+||.++. ...+++.+|||+|++.+|. .|++
T Consensus 1235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~I~idG~di~~~~~~~lR~~i~~V~Qep~LF~-gTIr 1313 (1466)
T PTZ00265 1235 DMTNEQDYQGDEEQNVGMKNVNEFSLTKEGGSGEDSTVFKNSGKILLDGVDICDYNLKDLRNLFSIVSQEPMLFN-MSIY 1313 (1466)
T ss_pred ccccccccccccccccccccccccccccccccccccccCCCCCeEEECCEEHHhCCHHHHHhhccEeCCCCcccc-ccHH
Confidence 14899999999874 3567889999999999985 6999
Q ss_pred HHHHHHhhhcCCCcCcHHHHHHHHHHHHHHcCCCc-------ccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEe
Q 000997 921 ESLLFSAWLRLPSEIELETQRAFVEEVMELVELTS-------LSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMD 993 (1194)
Q Consensus 921 e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~-------~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illLD 993 (1194)
|||.|+. + +.+. +.++++++..++.+ -.|+.+|.. ...||||||||++|||||+++|+||+||
T Consensus 1314 eNI~~g~----~-~at~----eeI~~A~k~A~l~~fI~~LP~GydT~VGe~-G~~LSGGQkQRIaIARALlr~p~ILLLD 1383 (1466)
T PTZ00265 1314 ENIKFGK----E-DATR----EDVKRACKFAAIDEFIESLPNKYDTNVGPY-GKSLSGGQKQRIAIARALLREPKILLLD 1383 (1466)
T ss_pred HHHhcCC----C-CCCH----HHHHHHHHHcCCHHHHHhCccccCCccCCC-CCcCCHHHHHHHHHHHHHhcCCCEEEEe
Confidence 9999862 2 2222 33666666666543 346667644 3579999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHH-hCCCEEEEEecCCcHHHHHhcCeEEEEccC---cE-EEEeCCC
Q 000997 994 EPTSGLDARAAAIVMRTVRNIV-NTGRTIVCTIHQPSIDIFESFDELLFMKRG---GE-LIYAGPL 1054 (1194)
Q Consensus 994 EPTsgLD~~~~~~i~~~l~~l~-~~g~tvi~~~H~~~~~~~~~~d~~~~l~~g---G~-~~~~g~~ 1054 (1194)
||||+||+.+.+.|++.|+++. .+++|+|+|+|+++ ..+.+|+|++|++| |+ ++..|+.
T Consensus 1384 EaTSaLD~~sE~~I~~~L~~~~~~~~~TvIiIaHRls--ti~~aD~Ivvl~~~~~~G~iv~e~Gth 1447 (1466)
T PTZ00265 1384 EATSSLDSNSEKLIEKTIVDIKDKADKTIITIAHRIA--SIKRSDKIVVFNNPDRTGSFVQAHGTH 1447 (1466)
T ss_pred CcccccCHHHHHHHHHHHHHHhccCCCEEEEEechHH--HHHhCCEEEEEeCCCCCCCEEEEecCH
Confidence 9999999999999999999986 36899999999975 56789999999862 66 5578874
No 18
>PRK13549 xylose transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.3e-65 Score=620.73 Aligned_cols=461 Identities=22% Similarity=0.329 Sum_probs=345.9
Q ss_pred eeeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCceeeEEEECCccCCCCCC----CceEEEEecCCCCCCC
Q 000997 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVP----PRTSAYVSQQDWQVAE 223 (1194)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~~~----~~~~~yv~Q~d~~~~~ 223 (1194)
+++|+|||++|++|++++|+|||||||||||++|+|.+++. +.+|+|.++|.++..... ++.++||+|++.+++.
T Consensus 18 ~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~-~~~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~ 96 (506)
T PRK13549 18 VKALDNVSLKVRAGEIVSLCGENGAGKSTLMKVLSGVYPHG-TYEGEIIFEGEELQASNIRDTERAGIAIIHQELALVKE 96 (506)
T ss_pred eEeecceeEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCCC-CCCeEEEECCEECCCCCHHHHHHCCeEEEEeccccCCC
Confidence 36999999999999999999999999999999999998751 248999999988754321 3569999999988999
Q ss_pred CCHHHHHHHhhhccCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhccCcchhHHHHHHHHHhCCcccccccccCcc
Q 000997 224 MTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEM 303 (1194)
Q Consensus 224 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~k~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~ 303 (1194)
+||+||+.|+......+. .+ . .+....++++++.+||++..+..++
T Consensus 97 ~tv~e~l~~~~~~~~~~~-~~--~----------------------------~~~~~~~~~~l~~~~l~~~~~~~~~--- 142 (506)
T PRK13549 97 LSVLENIFLGNEITPGGI-MD--Y----------------------------DAMYLRAQKLLAQLKLDINPATPVG--- 142 (506)
T ss_pred CcHHHHhhhcccccccCC-cC--H----------------------------HHHHHHHHHHHHHcCCCCCcccchh---
Confidence 999999988643211000 00 0 0012246788999999877776654
Q ss_pred CCCCChhhhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEcC
Q 000997 304 LKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSE 383 (1194)
Q Consensus 304 ~~~LSGGqkqRvsia~al~~~~~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~~ 383 (1194)
.|||||||||+||+||+.+|++|||||||+|||+.++..+.+.|+++++ . +++|+.++|+..++.+++|+|++|++
T Consensus 143 --~LSgGqkqrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~-~-~~tvi~~tH~~~~~~~~~d~v~~l~~ 218 (506)
T PRK13549 143 --NLGLGQQQLVEIAKALNKQARLLILDEPTASLTESETAVLLDIIRDLKA-H-GIACIYISHKLNEVKAISDTICVIRD 218 (506)
T ss_pred --hCCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHH-C-CCEEEEEeCcHHHHHHhcCEEEEEEC
Confidence 5999999999999999999999999999999999999999999999865 3 45566688999999999999999999
Q ss_pred CeEEEecChhhHHHHHHhcCCCCCCCCChhHHHHhhcCcccccccccCCCCCCcCCChhHHHHHHHhchhccchHHhhcC
Q 000997 384 GQIVYQGPRVSVLDFFASMGFSCPKRKNVADFLQEVTSKKDQEQYWSNPYLPYRYISPGKFAEAFHSYHTGKNLSEELAV 463 (1194)
Q Consensus 384 G~iv~~G~~~~~~~~F~~~G~~cp~~~~~adfl~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 463 (1194)
|++++.|+.+++.. .+.. +.
T Consensus 219 G~i~~~~~~~~~~~---------------~~~~-----------------------------~~---------------- 238 (506)
T PRK13549 219 GRHIGTRPAAGMTE---------------DDII-----------------------------TM---------------- 238 (506)
T ss_pred CEEeeecccccCCH---------------HHHH-----------------------------HH----------------
Confidence 99998886433200 0000 00
Q ss_pred CccccCCCcCcccCCCCCCcHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHcccCCCCCccCcchhHHHH
Q 000997 464 PFDRRFNHPAALSTSKYGEKRSELLKTSFNWQLLLMKRNSFIYVFKFIQLLIVALITMTVFFRTTMHHKTIDDGGLYLGA 543 (1194)
Q Consensus 464 ~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~R~~~~~~r~~~~~~~~~~~~~~~ali~g~vf~~~~~~~~~~~~~~~~~g~ 543 (1194)
+.... .
T Consensus 239 ------------------------------------------------------------~~~~~-----~--------- 244 (506)
T PRK13549 239 ------------------------------------------------------------MVGRE-----L--------- 244 (506)
T ss_pred ------------------------------------------------------------hhCcC-----c---------
Confidence 00000 0
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcchhhhhhccccccchhhHHHHHHHHHhhHHHHhhhHhhheeeeeccccccHHHHHHHH
Q 000997 544 LYFSMVIILFNGFTEVSMLVAKLPVLYKHRDLHFYPSWVYTIPSWALSIPTSLIESGFWVAVTYYVIGYDPNVVRFSRQL 623 (1194)
Q Consensus 544 lf~~l~~~~~~~~~~~~~~~~~~~v~~k~r~~~~y~~~ay~l~~~~~~iP~~~i~~~i~~~i~Y~~~gl~~~~~~f~~~~ 623 (1194)
T Consensus 245 -------------------------------------------------------------------------------- 244 (506)
T PRK13549 245 -------------------------------------------------------------------------------- 244 (506)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHcccChHHHHHHHHHHHHHHHHHhhccccCCCcchhHHHHHhhcHHHHHHHHHHHhhhcCCc
Q 000997 624 LLYFFLHQMSIGLFRVIGSLGRNMIVANTFGSFAMLVVMALGGFIISRDSIPKWWIWGFWVSPLMYAQNAASVNEFLGHS 703 (1194)
Q Consensus 624 l~~~~~~~~~~~l~~~i~~~~~~~~va~~~~~~~~l~~~l~~Gf~i~~~~ip~~~~w~~~isp~~y~~~al~~nef~~~~ 703 (1194)
.. ..|
T Consensus 245 ----------------------------------------------~~-~~~---------------------------- 249 (506)
T PRK13549 245 ----------------------------------------------TA-LYP---------------------------- 249 (506)
T ss_pred ----------------------------------------------cc-ccc----------------------------
Confidence 00 000
Q ss_pred ccccCCCCCCchhHHHhhhcCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccceechhhhhhHhhhhcCcc
Q 000997 704 WDKKAGNSNFSLGEAILRQRSLFPESYWYWIGVGAMLGYTLLFNALFTFFLSYLNPLGKQQAVVSKKELQERDRRRKGEN 783 (1194)
Q Consensus 704 ~~~~~~~~~~~~g~~~l~~~~~~~~~~~~w~~~g~ll~~~~~f~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 783 (1194)
.
T Consensus 250 --------------------------------------------------------~----------------------- 250 (506)
T PRK13549 250 --------------------------------------------------------R----------------------- 250 (506)
T ss_pred --------------------------------------------------------c-----------------------
Confidence 0
Q ss_pred hhHHhhhhhhcccCccCcccccCCcccccccceeEeecceeeeecccccccccccccceEEeeeeeEEEeCCcEEEEEcc
Q 000997 784 VVIELREYLQRSSSLNGKYFKQKGMVLPFQPLSMAFGNINYFVDVPVELKQEGVLEDRLQLLVNVTGAFRPGVLTALVGV 863 (1194)
Q Consensus 784 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~ 863 (1194)
. .. . . + ...+.++|+++.++. .+++.+|+||||+|++||++||+||
T Consensus 251 ----~------~~--~----~--~------~~~l~~~~l~~~~~~----------~~~~~vl~~vsl~i~~Ge~~~l~G~ 296 (506)
T PRK13549 251 ----E------PH--T----I--G------EVILEVRNLTAWDPV----------NPHIKRVDDVSFSLRRGEILGIAGL 296 (506)
T ss_pred ----c------cc--C----C--C------CceEEEecCcccccc----------ccccccccceeeEEcCCcEEEEeCC
Confidence 0 00 0 0 0 001233344332210 0124589999999999999999999
Q ss_pred CCCChHHHHhhhcCCCCCCeeEEEEEEcCccCCh----hcccceeeEeecCC---CCCCCCcHHHHHHHHhhhcCC--Cc
Q 000997 864 SGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ----ETFARISGYCEQND---IHSPGLTVLESLLFSAWLRLP--SE 934 (1194)
Q Consensus 864 nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~----~~~~~~~gyv~Q~~---~~~~~lTv~e~l~f~~~lr~~--~~ 934 (1194)
||||||||+++|+|..++ +.+|+|.++|.++.. ...++.+||++|++ .+++.+||.||+.+....... ..
T Consensus 297 NGsGKSTLlk~i~Gl~~~-~~~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~~~~~tv~e~l~~~~~~~~~~~~~ 375 (506)
T PRK13549 297 VGAGRTELVQCLFGAYPG-RWEGEIFIDGKPVKIRNPQQAIAQGIAMVPEDRKRDGIVPVMGVGKNITLAALDRFTGGSR 375 (506)
T ss_pred CCCCHHHHHHHHhCCCCC-CCCcEEEECCEECCCCCHHHHHHCCCEEeCcchhhCCCcCCCCHHHHhhhhhhhhhccCcc
Confidence 999999999999998641 148999999987532 12345689999985 467889999999875321111 00
Q ss_pred CcHHHHHHHHHHHHHHcCCC-cccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHH
Q 000997 935 IELETQRAFVEEVMELVELT-SLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSGLDARAAAIVMRTVRN 1013 (1194)
Q Consensus 935 ~~~~~~~~~v~~~l~~l~l~-~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~ 1013 (1194)
.......+.++++++.+++. +..+..+ ..|||||||||+||++|+.+|+||||||||+|||+.++..+++.|++
T Consensus 376 ~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~~LSgG~kqrv~lA~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~ 450 (506)
T PRK13549 376 IDDAAELKTILESIQRLKVKTASPELAI-----ARLSGGNQQKAVLAKCLLLNPKILILDEPTRGIDVGAKYEIYKLINQ 450 (506)
T ss_pred cChHHHHHHHHHHHHhcCccCCCccccc-----ccCCHHHHHHHHHHHHHhhCCCEEEEcCCCCCcCHhHHHHHHHHHHH
Confidence 12233345688999999996 4556543 58999999999999999999999999999999999999999999999
Q ss_pred HHhCCCEEEEEecCCcHHHHHhcCeEEEEccCcEEEEeCCCCCc
Q 000997 1014 IVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLGSK 1057 (1194)
Q Consensus 1014 l~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~~~~ 1057 (1194)
++++|+|||++|||++ ++.+.||++++|.+ |+++..|+..+.
T Consensus 451 l~~~g~tvi~~sHd~~-~~~~~~d~v~~l~~-G~i~~~~~~~~~ 492 (506)
T PRK13549 451 LVQQGVAIIVISSELP-EVLGLSDRVLVMHE-GKLKGDLINHNL 492 (506)
T ss_pred HHHCCCEEEEECCCHH-HHHHhCCEEEEEEC-CEEEEEeccccC
Confidence 9888999999999986 57788999999985 789988877543
No 19
>PRK10261 glutathione transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.1e-64 Score=627.42 Aligned_cols=488 Identities=20% Similarity=0.253 Sum_probs=348.6
Q ss_pred eeeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCceeeEEEECCccCC----------CCC------C-Cce
Q 000997 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFK----------EFV------P-PRT 210 (1194)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~----------~~~------~-~~~ 210 (1194)
.++|+||||++++||+++|+||||||||||+++|+|.+++. +|+|.++|..+. ... . ++.
T Consensus 29 ~~~l~~is~~v~~Ge~~~lvG~nGsGKSTLl~~l~Gll~p~---~G~i~~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 105 (623)
T PRK10261 29 IAAVRNLSFSLQRGETLAIVGESGSGKSVTALALMRLLEQA---GGLVQCDKMLLRRRSRQVIELSEQSAAQMRHVRGAD 105 (623)
T ss_pred eeEEEeeEEEECCCCEEEEECCCCChHHHHHHHHHcCCCCC---CeEEEECCEEeccccccccccccCCHHHHHHHhCCC
Confidence 46999999999999999999999999999999999999876 899999986431 100 1 246
Q ss_pred EEEEecCC--CCCCCCCHHHHHHHhhhcc-CCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhccCcchhHHHHHHHH
Q 000997 211 SAYVSQQD--WQVAEMTVRETLDFAGQCQ-GVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMK 287 (1194)
Q Consensus 211 ~~yv~Q~d--~~~~~lTV~E~l~f~~~~~-~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~k~~~~~~~~~~~~~~~~l~ 287 (1194)
++||+|++ .+++.+||.||+.++.+.. +.. + .+...+++++++
T Consensus 106 ig~v~Q~~~~~l~~~~tv~e~l~~~~~~~~~~~-~---------------------------------~~~~~~~~~~l~ 151 (623)
T PRK10261 106 MAMIFQEPMTSLNPVFTVGEQIAESIRLHQGAS-R---------------------------------EEAMVEAKRMLD 151 (623)
T ss_pred EEEEEeCchhhcCCCCCHHHHHHHHHHHhcCCC-H---------------------------------HHHHHHHHHHHH
Confidence 99999997 5788899999999875432 110 0 011234778899
Q ss_pred HhCCcc---cccccccCccCCCCChhhhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEE
Q 000997 288 ILGLDT---CADTLVGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISL 364 (1194)
Q Consensus 288 ~lgL~~---~~dt~vg~~~~~~LSGGqkqRvsia~al~~~~~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~ 364 (1194)
.+||++ ..+.. +..|||||||||+||+||+.+|++|||||||+|||+.++.++.+.|+++++.. +++|+.+
T Consensus 152 ~~gL~~~~~~~~~~-----~~~LSgGq~QRv~iA~AL~~~P~lLllDEPt~~LD~~~~~~l~~ll~~l~~~~-g~tvi~i 225 (623)
T PRK10261 152 QVRIPEAQTILSRY-----PHQLSGGMRQRVMIAMALSCRPAVLIADEPTTALDVTIQAQILQLIKVLQKEM-SMGVIFI 225 (623)
T ss_pred HCCCCChhhHHhCC-----CccCCHHHHHHHHHHHHHhCCCCEEEEeCCCCccCHHHHHHHHHHHHHHHHhc-CCEEEEE
Confidence 999964 24444 45699999999999999999999999999999999999999999999987643 4556778
Q ss_pred ecChhHHHhhcCeEEEEcCCeEEEecChhhHHHHHHhcCCCCCCCCChhHHHHhhcCcccccccccCCCCCCcCCChhHH
Q 000997 365 LQPAPEAYELFDDVILLSEGQIVYQGPRVSVLDFFASMGFSCPKRKNVADFLQEVTSKKDQEQYWSNPYLPYRYISPGKF 444 (1194)
Q Consensus 365 ~q~~~~~~~~~D~vilL~~G~iv~~G~~~~~~~~F~~~G~~cp~~~~~adfl~~v~s~~~~~~~~~~~~~~~~~~~~~~~ 444 (1194)
+|+..++.++||+|++|++|++++.|+++++.. -|.+....+++..+
T Consensus 226 tHdl~~~~~~adri~vl~~G~i~~~g~~~~~~~--------~~~~~~~~~l~~~~------------------------- 272 (623)
T PRK10261 226 THDMGVVAEIADRVLVMYQGEAVETGSVEQIFH--------APQHPYTRALLAAV------------------------- 272 (623)
T ss_pred cCCHHHHHHhCCEEEEeeCCeecccCCHHHhhc--------CCCChhhhhhhhcc-------------------------
Confidence 999999999999999999999999998765521 00000000000000
Q ss_pred HHHHHhchhccchHHhhcCCccccCCCcCcccCCCCCCcHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHH
Q 000997 445 AEAFHSYHTGKNLSEELAVPFDRRFNHPAALSTSKYGEKRSELLKTSFNWQLLLMKRNSFIYVFKFIQLLIVALITMTVF 524 (1194)
Q Consensus 445 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~R~~~~~~r~~~~~~~~~~~~~~~ali~g~vf 524 (1194)
+
T Consensus 273 -------------------~------------------------------------------------------------ 273 (623)
T PRK10261 273 -------------------P------------------------------------------------------------ 273 (623)
T ss_pred -------------------C------------------------------------------------------------
Confidence 0
Q ss_pred cccCCCCCccCcchhHHHHHHHHHHHHHHHHHHHHHHHHhcchhhhhhccccccchhhHHHHHHHHHhhHHHHhhhHhhh
Q 000997 525 FRTTMHHKTIDDGGLYLGALYFSMVIILFNGFTEVSMLVAKLPVLYKHRDLHFYPSWVYTIPSWALSIPTSLIESGFWVA 604 (1194)
Q Consensus 525 ~~~~~~~~~~~~~~~~~g~lf~~l~~~~~~~~~~~~~~~~~~~v~~k~r~~~~y~~~ay~l~~~~~~iP~~~i~~~i~~~ 604 (1194)
... .. .+ +. .|
T Consensus 274 -~~~----~~-~~-----------------------------------~~-----------------~~----------- 284 (623)
T PRK10261 274 -QLG----AM-KG-----------------------------------LD-----------------YP----------- 284 (623)
T ss_pred -ccc----cc-cc-----------------------------------cc-----------------CC-----------
Confidence 000 00 00 00 00
Q ss_pred eeeeeccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccChHHHHHHHHHHHHHHHHHhhccccCCCcchhHHHHHhh
Q 000997 605 VTYYVIGYDPNVVRFSRQLLLYFFLHQMSIGLFRVIGSLGRNMIVANTFGSFAMLVVMALGGFIISRDSIPKWWIWGFWV 684 (1194)
Q Consensus 605 i~Y~~~gl~~~~~~f~~~~l~~~~~~~~~~~l~~~i~~~~~~~~va~~~~~~~~l~~~l~~Gf~i~~~~ip~~~~w~~~i 684 (1194)
. ..+.
T Consensus 285 ------------------------------------------------------------------~-~~~~-------- 289 (623)
T PRK10261 285 ------------------------------------------------------------------R-RFPL-------- 289 (623)
T ss_pred ------------------------------------------------------------------c-cccc--------
Confidence 0 0000
Q ss_pred cHHHHHHHHHHHhhhcCCcccccCCCCCCchhHHHhhhcCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcc
Q 000997 685 SPLMYAQNAASVNEFLGHSWDKKAGNSNFSLGEAILRQRSLFPESYWYWIGVGAMLGYTLLFNALFTFFLSYLNPLGKQQ 764 (1194)
Q Consensus 685 sp~~y~~~al~~nef~~~~~~~~~~~~~~~~g~~~l~~~~~~~~~~~~w~~~g~ll~~~~~f~~l~~~~l~~~~~~~~~~ 764 (1194)
. ....+. ..
T Consensus 290 ---------------~---~~~~~~--------------------------------------------------~~--- 298 (623)
T PRK10261 290 ---------------I---SLEHPA--------------------------------------------------KQ--- 298 (623)
T ss_pred ---------------c---cccccc--------------------------------------------------cc---
Confidence 0 000000 00
Q ss_pred ceechhhhhhHhhhhcCcchhHHhhhhhhcccCccCcccccCCcccccccceeEeecceeeeecccccccccccccceEE
Q 000997 765 AVVSKKELQERDRRRKGENVVIELREYLQRSSSLNGKYFKQKGMVLPFQPLSMAFGNINYFVDVPVELKQEGVLEDRLQL 844 (1194)
Q Consensus 765 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 844 (1194)
.... .. . . .+. + ..-+..+|+++.++..... .........+
T Consensus 299 -----------------~~~~--~~-----~---~---~~~-~------~~~L~~~~l~~~y~~~~~~--~~~~~~~~~~ 339 (623)
T PRK10261 299 -----------------EPPI--EQ-----D---T---VVD-G------EPILQVRNLVTRFPLRSGL--LNRVTREVHA 339 (623)
T ss_pred -----------------Cccc--cc-----c---c---ccC-C------CceEEEeeeEEEEcCCCcc--ccccCCceEE
Confidence 0000 00 0 0 000 0 0124555665544210000 0000013579
Q ss_pred eeeeeEEEeCCcEEEEEccCCCChHHHHhhhcCCCCCCeeEEEEEEcCccCCh------hcccceeeEeecCC--CCCCC
Q 000997 845 LVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ------ETFARISGYCEQND--IHSPG 916 (1194)
Q Consensus 845 L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~------~~~~~~~gyv~Q~~--~~~~~ 916 (1194)
|+||||+|++||++||+|+||||||||+++|+|..+ +.+|+|.++|.++.. ..+++.++||+|++ .+++.
T Consensus 340 l~~vs~~i~~Ge~~~lvG~nGsGKSTLlk~i~Gl~~--p~~G~I~~~g~~i~~~~~~~~~~~~~~i~~v~Q~~~~~l~~~ 417 (623)
T PRK10261 340 VEKVSFDLWPGETLSLVGESGSGKSTTGRALLRLVE--SQGGEIIFNGQRIDTLSPGKLQALRRDIQFIFQDPYASLDPR 417 (623)
T ss_pred EeeeEeEEcCCCEEEEECCCCCCHHHHHHHHHcCCC--CCCcEEEECCEECCcCCHHHHHHhcCCeEEEecCchhhcCCC
Confidence 999999999999999999999999999999999876 468999999986532 12456799999997 47889
Q ss_pred CcHHHHHHHHhhhcCCCcCcHHHHHHHHHHHHHHcCCC-cccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCC
Q 000997 917 LTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELT-SLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEP 995 (1194)
Q Consensus 917 lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~-~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEP 995 (1194)
+||.|++.+....+. .....+..+.+.++++.++|. ...+.. +.+|||||||||+|||||+.+|+|||||||
T Consensus 418 ~tv~~~l~~~~~~~~--~~~~~~~~~~~~~~L~~~gL~~~~~~~~-----~~~LSgGqrQRv~iAraL~~~p~llllDEP 490 (623)
T PRK10261 418 QTVGDSIMEPLRVHG--LLPGKAAAARVAWLLERVGLLPEHAWRY-----PHEFSGGQRQRICIARALALNPKVIIADEA 490 (623)
T ss_pred CCHHHHHHHHHHHcC--CCCHHHHHHHHHHHHHHcCCCHHHhhCC-----cccCCHHHHHHHHHHHHHhcCCCEEEEeCC
Confidence 999999987643321 112334456788999999995 455554 358999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCeEEEEccCcEEEEeCCCC
Q 000997 996 TSGLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLG 1055 (1194)
Q Consensus 996 TsgLD~~~~~~i~~~l~~l~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~~ 1055 (1194)
|+|||+.++..++++|++++++ |.|||++|||++ .+...||++++|.+ |++++.|+..
T Consensus 491 ts~LD~~~~~~i~~ll~~l~~~~g~tvi~isHdl~-~v~~~~dri~vl~~-G~iv~~g~~~ 549 (623)
T PRK10261 491 VSALDVSIRGQIINLLLDLQRDFGIAYLFISHDMA-VVERISHRVAVMYL-GQIVEIGPRR 549 (623)
T ss_pred cccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEecCHH
Confidence 9999999999999999999765 899999999986 46778999999984 7999998753
No 20
>PRK10762 D-ribose transporter ATP binding protein; Provisional
Probab=100.00 E-value=1.2e-64 Score=617.48 Aligned_cols=450 Identities=20% Similarity=0.319 Sum_probs=343.4
Q ss_pred eeeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCceeeEEEECCccCCCCC----CCceEEEEecCCCCCCC
Q 000997 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV----PPRTSAYVSQQDWQVAE 223 (1194)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~~----~~~~~~yv~Q~d~~~~~ 223 (1194)
+++|+|+|++|++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++.... .++.++|++|++.+++.
T Consensus 17 ~~~l~~is~~i~~Ge~~~l~G~NGsGKSTLl~~l~G~~~p~---~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~ 93 (501)
T PRK10762 17 VKALSGAALNVYPGRVMALVGENGAGKSTMMKVLTGIYTRD---AGSILYLGKEVTFNGPKSSQEAGIGIIHQELNLIPQ 93 (501)
T ss_pred eEEeeeeeEEEcCCeEEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEECCCCCHHHHHhCCEEEEEcchhccCC
Confidence 46999999999999999999999999999999999999876 999999998875322 13569999999988999
Q ss_pred CCHHHHHHHhhhccCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhccCcchhHHHHHHHHHhCCcccccccccCcc
Q 000997 224 MTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEM 303 (1194)
Q Consensus 224 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~k~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~ 303 (1194)
+||+||+.|+.........++. .+...+++++++.+||.+..|..++
T Consensus 94 ~tv~e~l~~~~~~~~~~~~~~~------------------------------~~~~~~~~~~l~~~~l~~~~~~~~~--- 140 (501)
T PRK10762 94 LTIAENIFLGREFVNRFGRIDW------------------------------KKMYAEADKLLARLNLRFSSDKLVG--- 140 (501)
T ss_pred CcHHHHhhhccccccccCccCH------------------------------HHHHHHHHHHHHHcCCCCCccCchh---
Confidence 9999999886432100000000 0012246788999999887776665
Q ss_pred CCCCChhhhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEcC
Q 000997 304 LKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSE 383 (1194)
Q Consensus 304 ~~~LSGGqkqRvsia~al~~~~~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~~ 383 (1194)
.|||||||||+||+||+.+|++|||||||+|||+.++..+.+.|+++++. +++|+.++|+.+++.++||+|++|++
T Consensus 141 --~LSgG~~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~--~~tvii~sHd~~~~~~~~d~i~~l~~ 216 (501)
T PRK10762 141 --ELSIGEQQMVEIAKVLSFESKVIIMDEPTDALTDTETESLFRVIRELKSQ--GRGIVYISHRLKEIFEICDDVTVFRD 216 (501)
T ss_pred --hCCHHHHHHHHHHHHHhcCCCEEEEeCCcCCCCHHHHHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHhCCEEEEEeC
Confidence 59999999999999999999999999999999999999999999998653 45566688999999999999999999
Q ss_pred CeEEEecChhhHHHHHHhcCCCCCCCCChhHHHHhhcCcccccccccCCCCCCcCCChhHHHHHHHhchhccchHHhhcC
Q 000997 384 GQIVYQGPRVSVLDFFASMGFSCPKRKNVADFLQEVTSKKDQEQYWSNPYLPYRYISPGKFAEAFHSYHTGKNLSEELAV 463 (1194)
Q Consensus 384 G~iv~~G~~~~~~~~F~~~G~~cp~~~~~adfl~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 463 (1194)
|+++..|+.+++.. .+..+.
T Consensus 217 G~i~~~~~~~~~~~--------------------------------------------~~~~~~---------------- 236 (501)
T PRK10762 217 GQFIAEREVADLTE--------------------------------------------DSLIEM---------------- 236 (501)
T ss_pred CEEEEecCcCcCCH--------------------------------------------HHHHHH----------------
Confidence 99998875432200 000000
Q ss_pred CccccCCCcCcccCCCCCCcHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHcccCCCCCccCcchhHHHH
Q 000997 464 PFDRRFNHPAALSTSKYGEKRSELLKTSFNWQLLLMKRNSFIYVFKFIQLLIVALITMTVFFRTTMHHKTIDDGGLYLGA 543 (1194)
Q Consensus 464 ~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~R~~~~~~r~~~~~~~~~~~~~~~ali~g~vf~~~~~~~~~~~~~~~~~g~ 543 (1194)
++... .
T Consensus 237 ------------------------------------------------------------~~~~~-----~--------- 242 (501)
T PRK10762 237 ------------------------------------------------------------MVGRK-----L--------- 242 (501)
T ss_pred ------------------------------------------------------------hcCCC-----c---------
Confidence 00000 0
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcchhhhhhccccccchhhHHHHHHHHHhhHHHHhhhHhhheeeeeccccccHHHHHHHH
Q 000997 544 LYFSMVIILFNGFTEVSMLVAKLPVLYKHRDLHFYPSWVYTIPSWALSIPTSLIESGFWVAVTYYVIGYDPNVVRFSRQL 623 (1194)
Q Consensus 544 lf~~l~~~~~~~~~~~~~~~~~~~v~~k~r~~~~y~~~ay~l~~~~~~iP~~~i~~~i~~~i~Y~~~gl~~~~~~f~~~~ 623 (1194)
T Consensus 243 -------------------------------------------------------------------------------- 242 (501)
T PRK10762 243 -------------------------------------------------------------------------------- 242 (501)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHcccChHHHHHHHHHHHHHHHHHhhccccCCCcchhHHHHHhhcHHHHHHHHHHHhhhcCCc
Q 000997 624 LLYFFLHQMSIGLFRVIGSLGRNMIVANTFGSFAMLVVMALGGFIISRDSIPKWWIWGFWVSPLMYAQNAASVNEFLGHS 703 (1194)
Q Consensus 624 l~~~~~~~~~~~l~~~i~~~~~~~~va~~~~~~~~l~~~l~~Gf~i~~~~ip~~~~w~~~isp~~y~~~al~~nef~~~~ 703 (1194)
T Consensus 243 -------------------------------------------------------------------------------- 242 (501)
T PRK10762 243 -------------------------------------------------------------------------------- 242 (501)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccccCCCCCCchhHHHhhhcCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccceechhhhhhHhhhhcCcc
Q 000997 704 WDKKAGNSNFSLGEAILRQRSLFPESYWYWIGVGAMLGYTLLFNALFTFFLSYLNPLGKQQAVVSKKELQERDRRRKGEN 783 (1194)
Q Consensus 704 ~~~~~~~~~~~~g~~~l~~~~~~~~~~~~w~~~g~ll~~~~~f~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 783 (1194)
.... + .
T Consensus 243 -~~~~------------------~-------------------------------------------------------~ 248 (501)
T PRK10762 243 -EDQY------------------P-------------------------------------------------------R 248 (501)
T ss_pred -cccc------------------c-------------------------------------------------------c
Confidence 0000 0 0
Q ss_pred hhHHhhhhhhcccCccCcccccCCcccccccceeEeecceeeeecccccccccccccceEEeeeeeEEEeCCcEEEEEcc
Q 000997 784 VVIELREYLQRSSSLNGKYFKQKGMVLPFQPLSMAFGNINYFVDVPVELKQEGVLEDRLQLLVNVTGAFRPGVLTALVGV 863 (1194)
Q Consensus 784 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~ 863 (1194)
. .. . + .+..+.++|++ ..+|+|+||++++||++||+||
T Consensus 249 ----~------~~--~----~--------~~~~l~~~~l~------------------~~~l~~vsl~i~~Ge~~~liG~ 286 (501)
T PRK10762 249 ----L------DK--A----P--------GEVRLKVDNLS------------------GPGVNDVSFTLRKGEILGVSGL 286 (501)
T ss_pred ----c------cc--C----C--------CCcEEEEeCcc------------------cCCcccceEEEcCCcEEEEecC
Confidence 0 00 0 0 00013334432 1258899999999999999999
Q ss_pred CCCChHHHHhhhcCCCCCCeeEEEEEEcCccCCh----hcccceeeEeecCC---CCCCCCcHHHHHHHHhhhcCC---C
Q 000997 864 SGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ----ETFARISGYCEQND---IHSPGLTVLESLLFSAWLRLP---S 933 (1194)
Q Consensus 864 nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~----~~~~~~~gyv~Q~~---~~~~~lTv~e~l~f~~~lr~~---~ 933 (1194)
||||||||+++|+|... +.+|+|.++|.++.. ...++.+|||+|++ .+++.+||.|++.+....... .
T Consensus 287 NGsGKSTLl~~l~G~~~--p~~G~I~~~g~~i~~~~~~~~~~~~i~~v~q~~~~~~~~~~~tv~e~l~~~~~~~~~~~~~ 364 (501)
T PRK10762 287 MGAGRTELMKVLYGALP--RTSGYVTLDGHEVVTRSPQDGLANGIVYISEDRKRDGLVLGMSVKENMSLTALRYFSRAGG 364 (501)
T ss_pred CCCCHHHHHHHHhCCCC--CCceEEEECCEECCCCCHHHHHHCCCEEecCccccCCCcCCCcHHHHhhhhhhhhhccccc
Confidence 99999999999999876 458999999987532 12345699999995 477889999999875321100 0
Q ss_pred cCcHHHHHHHHHHHHHHcCCC-cccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHH
Q 000997 934 EIELETQRAFVEEVMELVELT-SLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSGLDARAAAIVMRTVR 1012 (1194)
Q Consensus 934 ~~~~~~~~~~v~~~l~~l~l~-~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~ 1012 (1194)
.....+..+.++++++.+++. +..+..+ ..|||||||||+||++|+.+|+||+|||||+|||+.++..+.+.|+
T Consensus 365 ~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~~LSgGekqrv~lA~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~ 439 (501)
T PRK10762 365 SLKHADEQQAVSDFIRLFNIKTPSMEQAI-----GLLSGGNQQKVAIARGLMTRPKVLILDEPTRGVDVGAKKEIYQLIN 439 (501)
T ss_pred ccCHHHHHHHHHHHHHhcCCCCCCccCch-----hhCCHHHHHHHHHHHHHhhCCCEEEEcCCCCCCCHhHHHHHHHHHH
Confidence 012233345678899999994 5566543 5799999999999999999999999999999999999999999999
Q ss_pred HHHhCCCEEEEEecCCcHHHHHhcCeEEEEccCcEEEEeCCCCC
Q 000997 1013 NIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLGS 1056 (1194)
Q Consensus 1013 ~l~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~~~ 1056 (1194)
+++++|.|||++||+++ .+.+.||++++|+ +|+++..|+..+
T Consensus 440 ~~~~~g~tviivtHd~~-~~~~~~d~v~~l~-~G~i~~~~~~~~ 481 (501)
T PRK10762 440 QFKAEGLSIILVSSEMP-EVLGMSDRILVMH-EGRISGEFTREQ 481 (501)
T ss_pred HHHHCCCEEEEEcCCHH-HHHhhCCEEEEEE-CCEEEEEecccc
Confidence 99878999999999986 5778899999998 478999888754
No 21
>PRK09700 D-allose transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.5e-64 Score=618.61 Aligned_cols=458 Identities=20% Similarity=0.301 Sum_probs=343.6
Q ss_pred eeeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCceeeEEEECCccCCCCCC----CceEEEEecCCCCCCC
Q 000997 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVP----PRTSAYVSQQDWQVAE 223 (1194)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~~~----~~~~~yv~Q~d~~~~~ 223 (1194)
+++|+|+|++|++|++++|+|||||||||||++|+|.++|. +|+|.++|.++..... ++.++||+|++.+++.
T Consensus 18 ~~il~~vs~~i~~Ge~~~liG~nGsGKSTLl~~i~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~~i~~v~q~~~~~~~ 94 (510)
T PRK09700 18 VHALKSVNLTVYPGEIHALLGENGAGKSTLMKVLSGIHEPT---KGTITINNINYNKLDHKLAAQLGIGIIYQELSVIDE 94 (510)
T ss_pred eEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCcCCC---ccEEEECCEECCCCCHHHHHHCCeEEEeecccccCC
Confidence 36999999999999999999999999999999999999776 9999999988754332 2469999999988999
Q ss_pred CCHHHHHHHhhhccCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhccCcchhHHHHHHHHHhCCcccccccccCcc
Q 000997 224 MTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEM 303 (1194)
Q Consensus 224 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~k~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~ 303 (1194)
+||+||+.++..... ..+.. . ..+ ..+...+++.+++.+||.+..++.++
T Consensus 95 ~tv~e~l~~~~~~~~--~~~~~-~----------~~~--------------~~~~~~~~~~~l~~~gl~~~~~~~~~--- 144 (510)
T PRK09700 95 LTVLENLYIGRHLTK--KVCGV-N----------IID--------------WREMRVRAAMMLLRVGLKVDLDEKVA--- 144 (510)
T ss_pred CcHHHHhhhcccccc--ccccc-c----------ccC--------------HHHHHHHHHHHHHHcCCCCCcccchh---
Confidence 999999987532100 00000 0 000 00112347788999999887777665
Q ss_pred CCCCChhhhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEcC
Q 000997 304 LKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSE 383 (1194)
Q Consensus 304 ~~~LSGGqkqRvsia~al~~~~~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~~ 383 (1194)
.|||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|+++++. +++|+.++|+..++..++|+|++|++
T Consensus 145 --~LSgG~~qrv~ia~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~--g~tiiivsHd~~~~~~~~d~v~~l~~ 220 (510)
T PRK09700 145 --NLSISHKQMLEIAKTLMLDAKVIIMDEPTSSLTNKEVDYLFLIMNQLRKE--GTAIVYISHKLAEIRRICDRYTVMKD 220 (510)
T ss_pred --hCCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC--CCEEEEEeCCHHHHHHhCCEEEEEEC
Confidence 59999999999999999999999999999999999999999999998753 45566688999999999999999999
Q ss_pred CeEEEecChhhHHHHHHhcCCCCCCCCChhHHHHhhcCcccccccccCCCCCCcCCChhHHHHHHHhchhccchHHhhcC
Q 000997 384 GQIVYQGPRVSVLDFFASMGFSCPKRKNVADFLQEVTSKKDQEQYWSNPYLPYRYISPGKFAEAFHSYHTGKNLSEELAV 463 (1194)
Q Consensus 384 G~iv~~G~~~~~~~~F~~~G~~cp~~~~~adfl~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 463 (1194)
|++++.|+++++.. .+.. +.
T Consensus 221 G~i~~~g~~~~~~~---------------~~~~-----------------------------~~---------------- 240 (510)
T PRK09700 221 GSSVCSGMVSDVSN---------------DDIV-----------------------------RL---------------- 240 (510)
T ss_pred CEEeeecchhhCCH---------------HHHH-----------------------------HH----------------
Confidence 99999887543210 0000 00
Q ss_pred CccccCCCcCcccCCCCCCcHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHcccCCCCCccCcchhHHHH
Q 000997 464 PFDRRFNHPAALSTSKYGEKRSELLKTSFNWQLLLMKRNSFIYVFKFIQLLIVALITMTVFFRTTMHHKTIDDGGLYLGA 543 (1194)
Q Consensus 464 ~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~R~~~~~~r~~~~~~~~~~~~~~~ali~g~vf~~~~~~~~~~~~~~~~~g~ 543 (1194)
+.... . .
T Consensus 241 ------------------------------------------------------------~~~~~-----~-~------- 247 (510)
T PRK09700 241 ------------------------------------------------------------MVGRE-----L-Q------- 247 (510)
T ss_pred ------------------------------------------------------------hcCCC-----c-c-------
Confidence 00000 0 0
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcchhhhhhccccccchhhHHHHHHHHHhhHHHHhhhHhhheeeeeccccccHHHHHHHH
Q 000997 544 LYFSMVIILFNGFTEVSMLVAKLPVLYKHRDLHFYPSWVYTIPSWALSIPTSLIESGFWVAVTYYVIGYDPNVVRFSRQL 623 (1194)
Q Consensus 544 lf~~l~~~~~~~~~~~~~~~~~~~v~~k~r~~~~y~~~ay~l~~~~~~iP~~~i~~~i~~~i~Y~~~gl~~~~~~f~~~~ 623 (1194)
T Consensus 248 -------------------------------------------------------------------------------- 247 (510)
T PRK09700 248 -------------------------------------------------------------------------------- 247 (510)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHcccChHHHHHHHHHHHHHHHHHhhccccCCCcchhHHHHHhhcHHHHHHHHHHHhhhcCCc
Q 000997 624 LLYFFLHQMSIGLFRVIGSLGRNMIVANTFGSFAMLVVMALGGFIISRDSIPKWWIWGFWVSPLMYAQNAASVNEFLGHS 703 (1194)
Q Consensus 624 l~~~~~~~~~~~l~~~i~~~~~~~~va~~~~~~~~l~~~l~~Gf~i~~~~ip~~~~w~~~isp~~y~~~al~~nef~~~~ 703 (1194)
. .+
T Consensus 248 ----------------------------------------------~---------------------------~~---- 250 (510)
T PRK09700 248 ----------------------------------------------N---------------------------RF---- 250 (510)
T ss_pred ----------------------------------------------c---------------------------cc----
Confidence 0 00
Q ss_pred ccccCCCCCCchhHHHhhhcCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccceechhhhhhHhhhhcCcc
Q 000997 704 WDKKAGNSNFSLGEAILRQRSLFPESYWYWIGVGAMLGYTLLFNALFTFFLSYLNPLGKQQAVVSKKELQERDRRRKGEN 783 (1194)
Q Consensus 704 ~~~~~~~~~~~~g~~~l~~~~~~~~~~~~w~~~g~ll~~~~~f~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 783 (1194)
.. .
T Consensus 251 -----------------------~~-------------------------------~----------------------- 253 (510)
T PRK09700 251 -----------------------NA-------------------------------M----------------------- 253 (510)
T ss_pred -----------------------cc-------------------------------c-----------------------
Confidence 00 0
Q ss_pred hhHHhhhhhhcccCccCcccccCCcccccccceeEeecceeeeecccccccccccccceEEeeeeeEEEeCCcEEEEEcc
Q 000997 784 VVIELREYLQRSSSLNGKYFKQKGMVLPFQPLSMAFGNINYFVDVPVELKQEGVLEDRLQLLVNVTGAFRPGVLTALVGV 863 (1194)
Q Consensus 784 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~ 863 (1194)
.+. .. . +. .+..+.++|++.. +. .+|+||||++++||++||+||
T Consensus 254 ----~~~----~~--~----~~-------~~~~l~~~~l~~~-------------~~--~~l~~isl~i~~Ge~~~l~G~ 297 (510)
T PRK09700 254 ----KEN----VS--N----LA-------HETVFEVRNVTSR-------------DR--KKVRDISFSVCRGEILGFAGL 297 (510)
T ss_pred ----ccc----cc--c----CC-------CCcEEEEeCcccc-------------CC--CcccceeEEEcCCcEEEEECC
Confidence 000 00 0 00 0001334444321 11 379999999999999999999
Q ss_pred CCCChHHHHhhhcCCCCCCeeEEEEEEcCccCCh----hcccceeeEeecC---CCCCCCCcHHHHHHHHhhhc---CCC
Q 000997 864 SGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ----ETFARISGYCEQN---DIHSPGLTVLESLLFSAWLR---LPS 933 (1194)
Q Consensus 864 nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~----~~~~~~~gyv~Q~---~~~~~~lTv~e~l~f~~~lr---~~~ 933 (1194)
||||||||+++|+|..+ +.+|+|.++|.++.. ...++.+|||+|+ ..+++.+||+||+.+....+ ...
T Consensus 298 NGsGKSTLlk~i~Gl~~--p~~G~I~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~~~~~tv~e~l~~~~~~~~~~~~~ 375 (510)
T PRK09700 298 VGSGRTELMNCLFGVDK--RAGGEIRLNGKDISPRSPLDAVKKGMAYITESRRDNGFFPNFSIAQNMAISRSLKDGGYKG 375 (510)
T ss_pred CCCCHHHHHHHHhCCCc--CCCCeEEECCEECCCCCHHHHHHCCcEEccCccccCCCcCCCcHHHHhccccccccccccc
Confidence 99999999999999876 468999999987532 1234578999998 45788999999998753211 000
Q ss_pred --c-CcHHHHHHHHHHHHHHcCCC-cccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHH
Q 000997 934 --E-IELETQRAFVEEVMELVELT-SLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSGLDARAAAIVMR 1009 (1194)
Q Consensus 934 --~-~~~~~~~~~v~~~l~~l~l~-~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~ 1009 (1194)
. ......++.++++++.+++. +..+..+ ..|||||||||+|||+|+.+|+||||||||+|||+.++..+++
T Consensus 376 ~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~~LSgGq~qrv~lAral~~~p~lLlLDEPt~~LD~~~~~~l~~ 450 (510)
T PRK09700 376 AMGLFHEVDEQRTAENQRELLALKCHSVNQNI-----TELSGGNQQKVLISKWLCCCPEVIIFDEPTRGIDVGAKAEIYK 450 (510)
T ss_pred cccccChHHHHHHHHHHHHhcCCCCCCccCcc-----ccCChHHHHHHHHHHHHhcCCCEEEECCCCCCcCHHHHHHHHH
Confidence 0 01222335578899999996 5666543 5799999999999999999999999999999999999999999
Q ss_pred HHHHHHhCCCEEEEEecCCcHHHHHhcCeEEEEccCcEEEEeCCC
Q 000997 1010 TVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1194)
Q Consensus 1010 ~l~~l~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~ 1054 (1194)
.|++++++|.|||++|||+. .+.+.||++++|++ |+++..++.
T Consensus 451 ~l~~l~~~g~tvi~vsHd~~-~~~~~~d~i~~l~~-G~i~~~~~~ 493 (510)
T PRK09700 451 VMRQLADDGKVILMVSSELP-EIITVCDRIAVFCE-GRLTQILTN 493 (510)
T ss_pred HHHHHHHCCCEEEEEcCCHH-HHHhhCCEEEEEEC-CEEEEEecC
Confidence 99999878999999999986 57788999999985 788888765
No 22
>PRK15134 microcin C ABC transporter ATP-binding protein YejF; Provisional
Probab=100.00 E-value=5.9e-64 Score=615.43 Aligned_cols=464 Identities=21% Similarity=0.291 Sum_probs=341.7
Q ss_pred eeeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCC--CceeeEEEECCccCCCCCC-------CceEEEEecCC
Q 000997 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHH--LQVSGKITYNGHGFKEFVP-------PRTSAYVSQQD 218 (1194)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~--~~~~G~i~~~G~~~~~~~~-------~~~~~yv~Q~d 218 (1194)
+++|+|+|+.+++||+++|+|||||||||||++|+|.+++. .+.+|+|.++|.++..... ++.++|++|++
T Consensus 22 ~~~l~~isl~i~~Ge~~~iiG~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~~~ig~v~Q~~ 101 (529)
T PRK15134 22 RTVVNDVSLQIEAGETLALVGESGSGKSVTALSILRLLPSPPVVYPSGDIRFHGESLLHASEQTLRGVRGNKIAMIFQEP 101 (529)
T ss_pred eeeeeceEEEEeCCCEEEEECCCCCcHHHHHHHHhcCCCCCcCCccceEEEECCEecccCCHHHHHHHhcCceEEEecCc
Confidence 46999999999999999999999999999999999998752 1248999999988754321 24799999997
Q ss_pred C--CCCCCCHHHHHHHhhhcc-CCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhccCcchhHHHHHHHHHhCCcc--
Q 000997 219 W--QVAEMTVRETLDFAGQCQ-GVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDT-- 293 (1194)
Q Consensus 219 ~--~~~~lTV~E~l~f~~~~~-~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~k~~~~~~~~~~~~~~~~l~~lgL~~-- 293 (1194)
. +++.+||.|++.+..... +.. ..+...+++++++.+||++
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~----------------------------------~~~~~~~~~~~l~~~gl~~~~ 147 (529)
T PRK15134 102 MVSLNPLHTLEKQLYEVLSLHRGMR----------------------------------REAARGEILNCLDRVGIRQAA 147 (529)
T ss_pred hhhcCchhhHHHHHHHHHHHhcCCC----------------------------------HHHHHHHHHHHHHHCCCCChH
Confidence 4 567789999987643211 100 0011234788899999975
Q ss_pred -cccccccCccCCCCChhhhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHH
Q 000997 294 -CADTLVGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAY 372 (1194)
Q Consensus 294 -~~dt~vg~~~~~~LSGGqkqRvsia~al~~~~~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~ 372 (1194)
..|..+ ..|||||||||+||+||+.+|++|+|||||+|||+.++.++.+.|+++++.. +.+|+.++|+..++.
T Consensus 148 ~~~~~~~-----~~LSgGe~qrv~iAraL~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~~-g~tvi~vtHd~~~~~ 221 (529)
T PRK15134 148 KRLTDYP-----HQLSGGERQRVMIAMALLTRPELLIADEPTTALDVSVQAQILQLLRELQQEL-NMGLLFITHNLSIVR 221 (529)
T ss_pred HHHhhCC-----cccCHHHHHHHHHHHHHhcCCCEEEEcCCCCccCHHHHHHHHHHHHHHHHhc-CCeEEEEcCcHHHHH
Confidence 245544 4699999999999999999999999999999999999999999999987543 455666889999999
Q ss_pred hhcCeEEEEcCCeEEEecChhhHHHHHHhcCCCCCCCCChhHHHHhhcCcccccccccCCCCCCcCCChhHHHHHHHhch
Q 000997 373 ELFDDVILLSEGQIVYQGPRVSVLDFFASMGFSCPKRKNVADFLQEVTSKKDQEQYWSNPYLPYRYISPGKFAEAFHSYH 452 (1194)
Q Consensus 373 ~~~D~vilL~~G~iv~~G~~~~~~~~F~~~G~~cp~~~~~adfl~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 452 (1194)
.++|+|++|++|++++.|+++++... |.. ...
T Consensus 222 ~~~dri~~l~~G~i~~~g~~~~~~~~--------~~~---------------------------------~~~------- 253 (529)
T PRK15134 222 KLADRVAVMQNGRCVEQNRAATLFSA--------PTH---------------------------------PYT------- 253 (529)
T ss_pred HhcCEEEEEECCEEEEeCCHHHHhhC--------CCC---------------------------------HHH-------
Confidence 99999999999999999876554210 000 000
Q ss_pred hccchHHhhcCCccccCCCcCcccCCCCCCcHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHcccCCCCC
Q 000997 453 TGKNLSEELAVPFDRRFNHPAALSTSKYGEKRSELLKTSFNWQLLLMKRNSFIYVFKFIQLLIVALITMTVFFRTTMHHK 532 (1194)
Q Consensus 453 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~R~~~~~~r~~~~~~~~~~~~~~~ali~g~vf~~~~~~~~ 532 (1194)
+.+ +...
T Consensus 254 -----------------------------------------~~~----------------------------~~~~---- 260 (529)
T PRK15134 254 -----------------------------------------QKL----------------------------LNSE---- 260 (529)
T ss_pred -----------------------------------------HHH----------------------------HHhC----
Confidence 000 0000
Q ss_pred ccCcchhHHHHHHHHHHHHHHHHHHHHHHHHhcchhhhhhccccccchhhHHHHHHHHHhhHHHHhhhHhhheeeeeccc
Q 000997 533 TIDDGGLYLGALYFSMVIILFNGFTEVSMLVAKLPVLYKHRDLHFYPSWVYTIPSWALSIPTSLIESGFWVAVTYYVIGY 612 (1194)
Q Consensus 533 ~~~~~~~~~g~lf~~l~~~~~~~~~~~~~~~~~~~v~~k~r~~~~y~~~ay~l~~~~~~iP~~~i~~~i~~~i~Y~~~gl 612 (1194)
|
T Consensus 261 ------------------------------------------------------------~------------------- 261 (529)
T PRK15134 261 ------------------------------------------------------------P------------------- 261 (529)
T ss_pred ------------------------------------------------------------c-------------------
Confidence 0
Q ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccChHHHHHHHHHHHHHHHHHhhccccCCCcchhHHHHHhhcHHHHHHH
Q 000997 613 DPNVVRFSRQLLLYFFLHQMSIGLFRVIGSLGRNMIVANTFGSFAMLVVMALGGFIISRDSIPKWWIWGFWVSPLMYAQN 692 (1194)
Q Consensus 613 ~~~~~~f~~~~l~~~~~~~~~~~l~~~i~~~~~~~~va~~~~~~~~l~~~l~~Gf~i~~~~ip~~~~w~~~isp~~y~~~ 692 (1194)
.
T Consensus 262 ----------------------------------------------------------~--------------------- 262 (529)
T PRK15134 262 ----------------------------------------------------------S--------------------- 262 (529)
T ss_pred ----------------------------------------------------------c---------------------
Confidence 0
Q ss_pred HHHHhhhcCCcccccCCCCCCchhHHHhhhcCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccceechhhh
Q 000997 693 AASVNEFLGHSWDKKAGNSNFSLGEAILRQRSLFPESYWYWIGVGAMLGYTLLFNALFTFFLSYLNPLGKQQAVVSKKEL 772 (1194)
Q Consensus 693 al~~nef~~~~~~~~~~~~~~~~g~~~l~~~~~~~~~~~~w~~~g~ll~~~~~f~~l~~~~l~~~~~~~~~~~~~~~~~~ 772 (1194)
. .+.
T Consensus 263 -----------------~-----------------------------------------------~~~------------ 266 (529)
T PRK15134 263 -----------------G-----------------------------------------------DPV------------ 266 (529)
T ss_pred -----------------c-----------------------------------------------ccc------------
Confidence 0 000
Q ss_pred hhHhhhhcCcchhHHhhhhhhcccCccCcccccCCcccccccceeEeecceeeeecccccccccccccceEEeeeeeEEE
Q 000997 773 QERDRRRKGENVVIELREYLQRSSSLNGKYFKQKGMVLPFQPLSMAFGNINYFVDVPVELKQEGVLEDRLQLLVNVTGAF 852 (1194)
Q Consensus 773 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i 852 (1194)
. .. . . ... -+.++|+++.++..... .+...+.+.+|+||||++
T Consensus 267 ---------------~------~~--~----~-~~~-------~l~~~~l~~~~~~~~~~--~~~~~~~~~il~~isl~i 309 (529)
T PRK15134 267 ---------------P------LP--E----P-ASP-------LLDVEQLQVAFPIRKGI--LKRTVDHNVVVKNISFTL 309 (529)
T ss_pred ---------------c------cC--C----C-CCC-------cccccCcEEEeecCccc--cccccccceeeecceeEE
Confidence 0 00 0 0 000 02223333222100000 000001356999999999
Q ss_pred eCCcEEEEEccCCCChHHHHhhhcCCCCCCeeEEEEEEcCccCCh---h---cccceeeEeecCC--CCCCCCcHHHHHH
Q 000997 853 RPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ---E---TFARISGYCEQND--IHSPGLTVLESLL 924 (1194)
Q Consensus 853 ~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~---~---~~~~~~gyv~Q~~--~~~~~lTv~e~l~ 924 (1194)
++||++||+||||||||||+++|+|..+ .+|+|+++|.++.. . .+++.+||++|++ .+++.+||+||+.
T Consensus 310 ~~Ge~~~i~G~nGsGKSTLlk~l~Gl~~---~~G~i~~~g~~i~~~~~~~~~~~~~~i~~v~q~~~~~l~~~~tv~e~l~ 386 (529)
T PRK15134 310 RPGETLGLVGESGSGKSTTGLALLRLIN---SQGEIWFDGQPLHNLNRRQLLPVRHRIQVVFQDPNSSLNPRLNVLQIIE 386 (529)
T ss_pred cCCCEEEEECCCCCCHHHHHHHHhCcCC---CCcEEEECCEEccccchhhHHHhhhceEEEEeCchhhcCCcccHHHHHH
Confidence 9999999999999999999999999864 47999999987532 1 1345689999996 4778899999998
Q ss_pred HHhhhcCCCcCcHHHHHHHHHHHHHHcCCC-cccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHH
Q 000997 925 FSAWLRLPSEIELETQRAFVEEVMELVELT-SLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSGLDARA 1003 (1194)
Q Consensus 925 f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~-~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEPTsgLD~~~ 1003 (1194)
+....+.. .....+.++.++++++.+++. +..+.. +..|||||||||+||++|+.+|++|||||||+|||+.+
T Consensus 387 ~~~~~~~~-~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~~LSgG~~qrv~la~al~~~p~llllDEPt~~LD~~~ 460 (529)
T PRK15134 387 EGLRVHQP-TLSAAQREQQVIAVMEEVGLDPETRHRY-----PAEFSGGQRQRIAIARALILKPSLIILDEPTSSLDKTV 460 (529)
T ss_pred HHHHhccc-cCChHHHHHHHHHHHHHcCCCHHHHhcC-----CccCCHHHHHHHHHHHHHhCCCCEEEeeCCccccCHHH
Confidence 86533211 122233446688999999996 355554 35899999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCeEEEEccCcEEEEeCCC
Q 000997 1004 AAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1194)
Q Consensus 1004 ~~~i~~~l~~l~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~ 1054 (1194)
+..+++.|++++++ |.|||++||+++ .+.+.||++++|++ |+++..|+.
T Consensus 461 ~~~l~~~l~~~~~~~~~tvi~vsHd~~-~~~~~~d~i~~l~~-G~i~~~~~~ 510 (529)
T PRK15134 461 QAQILALLKSLQQKHQLAYLFISHDLH-VVRALCHQVIVLRQ-GEVVEQGDC 510 (529)
T ss_pred HHHHHHHHHHHHHhhCCEEEEEeCCHH-HHHHhcCeEEEEEC-CEEEEEcCH
Confidence 99999999999865 899999999986 46678999999985 789988874
No 23
>PRK15439 autoinducer 2 ABC transporter ATP-binding protein LsrA; Provisional
Probab=100.00 E-value=8.6e-64 Score=610.31 Aligned_cols=453 Identities=20% Similarity=0.277 Sum_probs=340.8
Q ss_pred eeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCceeeEEEECCccCCCCCC----CceEEEEecCCCCCCCC
Q 000997 149 TILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVP----PRTSAYVSQQDWQVAEM 224 (1194)
Q Consensus 149 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~~~----~~~~~yv~Q~d~~~~~l 224 (1194)
++|+|+|+.|++|++++|+|||||||||||++|+|.++|. +|+|.++|.++..... ++.++|++|++.+++.+
T Consensus 25 ~il~~vsl~i~~Ge~~~liG~NGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~~ 101 (510)
T PRK15439 25 EVLKGIDFTLHAGEVHALLGGNGAGKSTLMKIIAGIVPPD---SGTLEIGGNPCARLTPAKAHQLGIYLVPQEPLLFPNL 101 (510)
T ss_pred eeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEECCCCCHHHHHhCCEEEEeccCccCCCC
Confidence 5999999999999999999999999999999999999876 9999999988754321 24699999999899999
Q ss_pred CHHHHHHHhhhccCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhccCcchhHHHHHHHHHhCCcccccccccCccC
Q 000997 225 TVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEML 304 (1194)
Q Consensus 225 TV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~k~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~ 304 (1194)
||+||+.|..... . +....++++++.+||++..+..++
T Consensus 102 tv~e~l~~~~~~~------~--------------------------------~~~~~~~~~l~~~~l~~~~~~~~~---- 139 (510)
T PRK15439 102 SVKENILFGLPKR------Q--------------------------------ASMQKMKQLLAALGCQLDLDSSAG---- 139 (510)
T ss_pred cHHHHhhcccccc------h--------------------------------HHHHHHHHHHHHcCCCccccCChh----
Confidence 9999998753100 0 001236778999999887777664
Q ss_pred CCCChhhhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEcCC
Q 000997 305 KGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEG 384 (1194)
Q Consensus 305 ~~LSGGqkqRvsia~al~~~~~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~~G 384 (1194)
.|||||||||+||+||+.+|++|+|||||+|||+.++.++.+.|+++++. +++|+.++|+.+++.++||+|++|++|
T Consensus 140 -~LSgG~~qrv~la~aL~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~--g~tiiivtHd~~~~~~~~d~i~~l~~G 216 (510)
T PRK15439 140 -SLEVADRQIVEILRGLMRDSRILILDEPTASLTPAETERLFSRIRELLAQ--GVGIVFISHKLPEIRQLADRISVMRDG 216 (510)
T ss_pred -hCCHHHHHHHHHHHHHHcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHhCCEEEEEECC
Confidence 59999999999999999999999999999999999999999999998753 456667889999999999999999999
Q ss_pred eEEEecChhhHHHHHHhcCCCCCCCCChhHHHHhhcCcccccccccCCCCCCcCCChhHHHHHHHhchhccchHHhhcCC
Q 000997 385 QIVYQGPRVSVLDFFASMGFSCPKRKNVADFLQEVTSKKDQEQYWSNPYLPYRYISPGKFAEAFHSYHTGKNLSEELAVP 464 (1194)
Q Consensus 385 ~iv~~G~~~~~~~~F~~~G~~cp~~~~~adfl~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 464 (1194)
++++.|+++++... +.+ +.+.
T Consensus 217 ~i~~~g~~~~~~~~---------------~~~-----------------------------~~~~--------------- 237 (510)
T PRK15439 217 TIALSGKTADLSTD---------------DII-----------------------------QAIT--------------- 237 (510)
T ss_pred EEEEecChHHcCHH---------------HHH-----------------------------HHHh---------------
Confidence 99999876543110 000 0000
Q ss_pred ccccCCCcCcccCCCCCCcHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHcccCCCCCccCcchhHHHHH
Q 000997 465 FDRRFNHPAALSTSKYGEKRSELLKTSFNWQLLLMKRNSFIYVFKFIQLLIVALITMTVFFRTTMHHKTIDDGGLYLGAL 544 (1194)
Q Consensus 465 ~~~~~~~~~~~~~~~~~~s~~~~~~~~~~R~~~~~~r~~~~~~~~~~~~~~~ali~g~vf~~~~~~~~~~~~~~~~~g~l 544 (1194)
..... .....
T Consensus 238 -------------------------------------------------------------~~~~~-~~~~~-------- 247 (510)
T PRK15439 238 -------------------------------------------------------------PAARE-KSLSA-------- 247 (510)
T ss_pred -------------------------------------------------------------Ccccc-ccccc--------
Confidence 00000 00000
Q ss_pred HHHHHHHHHHHHHHHHHHHhcchhhhhhccccccchhhHHHHHHHHHhhHHHHhhhHhhheeeeeccccccHHHHHHHHH
Q 000997 545 YFSMVIILFNGFTEVSMLVAKLPVLYKHRDLHFYPSWVYTIPSWALSIPTSLIESGFWVAVTYYVIGYDPNVVRFSRQLL 624 (1194)
Q Consensus 545 f~~l~~~~~~~~~~~~~~~~~~~v~~k~r~~~~y~~~ay~l~~~~~~iP~~~i~~~i~~~i~Y~~~gl~~~~~~f~~~~l 624 (1194)
.
T Consensus 248 ----------------------------~--------------------------------------------------- 248 (510)
T PRK15439 248 ----------------------------S--------------------------------------------------- 248 (510)
T ss_pred ----------------------------c---------------------------------------------------
Confidence 0
Q ss_pred HHHHHHHHHHHHHHHHHHcccChHHHHHHHHHHHHHHHHHhhccccCCCcchhHHHHHhhcHHHHHHHHHHHhhhcCCcc
Q 000997 625 LYFFLHQMSIGLFRVIGSLGRNMIVANTFGSFAMLVVMALGGFIISRDSIPKWWIWGFWVSPLMYAQNAASVNEFLGHSW 704 (1194)
Q Consensus 625 ~~~~~~~~~~~l~~~i~~~~~~~~va~~~~~~~~l~~~l~~Gf~i~~~~ip~~~~w~~~isp~~y~~~al~~nef~~~~~ 704 (1194)
.. .
T Consensus 249 --------------------------------------------------~~---------------------------~ 251 (510)
T PRK15439 249 --------------------------------------------------QK---------------------------L 251 (510)
T ss_pred --------------------------------------------------cc---------------------------c
Confidence 00 0
Q ss_pred cccCCCCCCchhHHHhhhcCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccceechhhhhhHhhhhcCcch
Q 000997 705 DKKAGNSNFSLGEAILRQRSLFPESYWYWIGVGAMLGYTLLFNALFTFFLSYLNPLGKQQAVVSKKELQERDRRRKGENV 784 (1194)
Q Consensus 705 ~~~~~~~~~~~g~~~l~~~~~~~~~~~~w~~~g~ll~~~~~f~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 784 (1194)
. ..+ +.
T Consensus 252 ~-----------------~~~---------------------------------~~------------------------ 257 (510)
T PRK15439 252 W-----------------LEL---------------------------------PG------------------------ 257 (510)
T ss_pred c-----------------ccc---------------------------------cc------------------------
Confidence 0 000 00
Q ss_pred hHHhhhhhhcccCccCcccccCCcccccccceeEeecceeeeecccccccccccccceEEeeeeeEEEeCCcEEEEEccC
Q 000997 785 VIELREYLQRSSSLNGKYFKQKGMVLPFQPLSMAFGNINYFVDVPVELKQEGVLEDRLQLLVNVTGAFRPGVLTALVGVS 864 (1194)
Q Consensus 785 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~n 864 (1194)
. ... . +. + +.-+..+|++. .+|+|||+++++|+++||+|||
T Consensus 258 ---~------~~~-~----~~-~------~~~l~~~~l~~------------------~~l~~isl~i~~Ge~~~l~G~N 298 (510)
T PRK15439 258 ---N------RRQ-Q----AA-G------APVLTVEDLTG------------------EGFRNISLEVRAGEILGLAGVV 298 (510)
T ss_pred ---c------ccc-c----CC-C------CceEEEeCCCC------------------CCccceeEEEcCCcEEEEECCC
Confidence 0 000 0 00 0 00133344331 1488999999999999999999
Q ss_pred CCChHHHHhhhcCCCCCCeeEEEEEEcCccCChh----cccceeeEeecCC---CCCCCCcHHHHHHHHhhhcCCCcCcH
Q 000997 865 GAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQE----TFARISGYCEQND---IHSPGLTVLESLLFSAWLRLPSEIEL 937 (1194)
Q Consensus 865 GaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~----~~~~~~gyv~Q~~---~~~~~lTv~e~l~f~~~lr~~~~~~~ 937 (1194)
|||||||+++|+|..+ +.+|+|.++|.++... ..++.++|++|++ .+++.+|+.|++......+.......
T Consensus 299 GsGKSTLl~~i~Gl~~--p~~G~i~~~g~~i~~~~~~~~~~~~i~~v~q~~~~~~l~~~~t~~~~l~~~~~~~~~~~~~~ 376 (510)
T PRK15439 299 GAGRTELAETLYGLRP--ARGGRIMLNGKEINALSTAQRLARGLVYLPEDRQSSGLYLDAPLAWNVCALTHNRRGFWIKP 376 (510)
T ss_pred CCCHHHHHHHHcCCCC--CCCcEEEECCEECCCCCHHHHHhCCcEECCCChhhCCccCCCcHHHHHHhhhhhhhccccCh
Confidence 9999999999999866 4589999999875321 1245689999984 47788999999864211111100111
Q ss_pred HHHHHHHHHHHHHcCCC-cccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHh
Q 000997 938 ETQRAFVEEVMELVELT-SLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSGLDARAAAIVMRTVRNIVN 1016 (1194)
Q Consensus 938 ~~~~~~v~~~l~~l~l~-~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~l~~ 1016 (1194)
...++.++++++.+++. +..+..+ ..|||||||||+||++|+.+|+||||||||+|||+.++..+++.|+++++
T Consensus 377 ~~~~~~~~~~l~~~~l~~~~~~~~~-----~~LSgG~kqrl~la~al~~~p~lLlLDEPt~gLD~~~~~~l~~~l~~l~~ 451 (510)
T PRK15439 377 ARENAVLERYRRALNIKFNHAEQAA-----RTLSGGNQQKVLIAKCLEASPQLLIVDEPTRGVDVSARNDIYQLIRSIAA 451 (510)
T ss_pred HHHHHHHHHHHHHcCCCCCCccCcc-----ccCCcHHHHHHHHHHHHhhCCCEEEECCCCcCcChhHHHHHHHHHHHHHh
Confidence 22335678899999996 5666543 58999999999999999999999999999999999999999999999988
Q ss_pred CCCEEEEEecCCcHHHHHhcCeEEEEccCcEEEEeCCCCC
Q 000997 1017 TGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLGS 1056 (1194)
Q Consensus 1017 ~g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~~~ 1056 (1194)
+|.|||+++||++ .+.+.||++++|+ +|+++..|..++
T Consensus 452 ~g~tiIivsHd~~-~i~~~~d~i~~l~-~G~i~~~~~~~~ 489 (510)
T PRK15439 452 QNVAVLFISSDLE-EIEQMADRVLVMH-QGEISGALTGAA 489 (510)
T ss_pred CCCEEEEECCCHH-HHHHhCCEEEEEE-CCEEEEEEcccc
Confidence 8999999999986 5778899999998 579998886643
No 24
>TIGR02633 xylG D-xylose ABC transporter, ATP-binding protein. Several bacterial species have enzymes xylose isomerase and xylulokinase enzymes for xylose utilization. Members of this protein family are the ATP-binding cassette (ABC) subunit of the known or predicted high-affinity xylose ABC transporter for xylose import. These genes, which closely resemble other sugar transport ABC transporter genes, typically are encoded near xylose utilization enzymes and regulatory proteins. Note that this form of the transporter contains two copies of the ABC transporter domain (pfam00005).
Probab=100.00 E-value=2.4e-63 Score=606.89 Aligned_cols=460 Identities=20% Similarity=0.294 Sum_probs=341.4
Q ss_pred eeeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCceeeEEEECCccCCCCCC----CceEEEEecCCCCCCC
Q 000997 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVP----PRTSAYVSQQDWQVAE 223 (1194)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~~~----~~~~~yv~Q~d~~~~~ 223 (1194)
+++|+|||+++++|++++|+|||||||||||++|+|.+++. +.+|+|.++|.++..... ++.++||+|++.+++.
T Consensus 14 ~~il~~isl~i~~Ge~~~liG~nGsGKSTLl~~i~G~~~~~-~~~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~ 92 (500)
T TIGR02633 14 VKALDGIDLEVRPGECVGLCGENGAGKSTLMKILSGVYPHG-TWDGEIYWSGSPLKASNIRDTERAGIVIIHQELTLVPE 92 (500)
T ss_pred eEeecceEEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCC-CCCeEEEECCEECCCCCHHHHHhCCEEEEeeccccCCC
Confidence 46999999999999999999999999999999999998651 238999999988754321 3569999999988999
Q ss_pred CCHHHHHHHhhhccCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhccCcchhHHHHHHHHHhCCcccc-cccccCc
Q 000997 224 MTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCA-DTLVGDE 302 (1194)
Q Consensus 224 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~k~~~~~~~~~~~~~~~~l~~lgL~~~~-dt~vg~~ 302 (1194)
+||+||+.++......+...+ . .+...+++.+++.+||.+.. ++.+
T Consensus 93 ~tv~~~l~~~~~~~~~~~~~~----------------~--------------~~~~~~~~~~l~~~~l~~~~~~~~~--- 139 (500)
T TIGR02633 93 LSVAENIFLGNEITLPGGRMA----------------Y--------------NAMYLRAKNLLRELQLDADNVTRPV--- 139 (500)
T ss_pred CcHHHHHHhhccccccccccC----------------H--------------HHHHHHHHHHHHHcCCCCCcccCch---
Confidence 999999988643210000000 0 00122467889999998654 3444
Q ss_pred cCCCCChhhhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEc
Q 000997 303 MLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLS 382 (1194)
Q Consensus 303 ~~~~LSGGqkqRvsia~al~~~~~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~ 382 (1194)
..|||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|+++++. +++|+.++|+..++.++||+|++|+
T Consensus 140 --~~LSgG~~qrv~iA~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~--g~tviiitHd~~~~~~~~d~i~~l~ 215 (500)
T TIGR02633 140 --GDYGGGQQQLVEIAKALNKQARLLILDEPSSSLTEKETEILLDIIRDLKAH--GVACVYISHKLNEVKAVCDTICVIR 215 (500)
T ss_pred --hhCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC--CCEEEEEeCcHHHHHHhCCEEEEEe
Confidence 469999999999999999999999999999999999999999999998753 4556668899999999999999999
Q ss_pred CCeEEEecChhhHHHHHHhcCCCCCCCCChhHHHHhhcCcccccccccCCCCCCcCCChhHHHHHHHhchhccchHHhhc
Q 000997 383 EGQIVYQGPRVSVLDFFASMGFSCPKRKNVADFLQEVTSKKDQEQYWSNPYLPYRYISPGKFAEAFHSYHTGKNLSEELA 462 (1194)
Q Consensus 383 ~G~iv~~G~~~~~~~~F~~~G~~cp~~~~~adfl~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 462 (1194)
+|++++.|+.+++.. ....+
T Consensus 216 ~G~i~~~~~~~~~~~--------------------------------------------~~~~~---------------- 235 (500)
T TIGR02633 216 DGQHVATKDMSTMSE--------------------------------------------DDIIT---------------- 235 (500)
T ss_pred CCeEeeecCcccCCH--------------------------------------------HHHHH----------------
Confidence 999987764321100 00000
Q ss_pred CCccccCCCcCcccCCCCCCcHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHcccCCCCCccCcchhHHH
Q 000997 463 VPFDRRFNHPAALSTSKYGEKRSELLKTSFNWQLLLMKRNSFIYVFKFIQLLIVALITMTVFFRTTMHHKTIDDGGLYLG 542 (1194)
Q Consensus 463 ~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~R~~~~~~r~~~~~~~~~~~~~~~ali~g~vf~~~~~~~~~~~~~~~~~g 542 (1194)
.+...
T Consensus 236 ------------------------------------------------------------~~~~~--------------- 240 (500)
T TIGR02633 236 ------------------------------------------------------------MMVGR--------------- 240 (500)
T ss_pred ------------------------------------------------------------HHhCc---------------
Confidence 00000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcchhhhhhccccccchhhHHHHHHHHHhhHHHHhhhHhhheeeeeccccccHHHHHHH
Q 000997 543 ALYFSMVIILFNGFTEVSMLVAKLPVLYKHRDLHFYPSWVYTIPSWALSIPTSLIESGFWVAVTYYVIGYDPNVVRFSRQ 622 (1194)
Q Consensus 543 ~lf~~l~~~~~~~~~~~~~~~~~~~v~~k~r~~~~y~~~ay~l~~~~~~iP~~~i~~~i~~~i~Y~~~gl~~~~~~f~~~ 622 (1194)
+
T Consensus 241 --------------------------------------------------~----------------------------- 241 (500)
T TIGR02633 241 --------------------------------------------------E----------------------------- 241 (500)
T ss_pred --------------------------------------------------c-----------------------------
Confidence 0
Q ss_pred HHHHHHHHHHHHHHHHHHHHcccChHHHHHHHHHHHHHHHHHhhccccCCCcchhHHHHHhhcHHHHHHHHHHHhhhcCC
Q 000997 623 LLLYFFLHQMSIGLFRVIGSLGRNMIVANTFGSFAMLVVMALGGFIISRDSIPKWWIWGFWVSPLMYAQNAASVNEFLGH 702 (1194)
Q Consensus 623 ~l~~~~~~~~~~~l~~~i~~~~~~~~va~~~~~~~~l~~~l~~Gf~i~~~~ip~~~~w~~~isp~~y~~~al~~nef~~~ 702 (1194)
.+.
T Consensus 242 ---------------------------------------------------~~~-------------------------- 244 (500)
T TIGR02633 242 ---------------------------------------------------ITS-------------------------- 244 (500)
T ss_pred ---------------------------------------------------ccc--------------------------
Confidence 000
Q ss_pred cccccCCCCCCchhHHHhhhcCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccceechhhhhhHhhhhcCc
Q 000997 703 SWDKKAGNSNFSLGEAILRQRSLFPESYWYWIGVGAMLGYTLLFNALFTFFLSYLNPLGKQQAVVSKKELQERDRRRKGE 782 (1194)
Q Consensus 703 ~~~~~~~~~~~~~g~~~l~~~~~~~~~~~~w~~~g~ll~~~~~f~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 782 (1194)
. . +
T Consensus 245 ----~-----------------~---------------------------------~----------------------- 247 (500)
T TIGR02633 245 ----L-----------------Y---------------------------------P----------------------- 247 (500)
T ss_pred ----c-----------------c---------------------------------c-----------------------
Confidence 0 0 0
Q ss_pred chhHHhhhhhhcccCccCcccccCCcccccccceeEeecceeeeecccccccccccccceEEeeeeeEEEeCCcEEEEEc
Q 000997 783 NVVIELREYLQRSSSLNGKYFKQKGMVLPFQPLSMAFGNINYFVDVPVELKQEGVLEDRLQLLVNVTGAFRPGVLTALVG 862 (1194)
Q Consensus 783 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G 862 (1194)
. . .. +.. ..-+.++|+++.+. ..+++.+|+|+||++++||++||+|
T Consensus 248 ~----~------~~-------~~~-------~~~l~~~~l~~~~~----------~~~~~~~l~~is~~i~~Ge~~~l~G 293 (500)
T TIGR02633 248 H----E------PH-------EIG-------DVILEARNLTCWDV----------INPHRKRVDDVSFSLRRGEILGVAG 293 (500)
T ss_pred c----c------cc-------CCC-------CceEEEeCCccccc----------ccccccccccceeEEeCCcEEEEeC
Confidence 0 0 00 000 00133344433210 0012458999999999999999999
Q ss_pred cCCCChHHHHhhhcCCCCCCeeEEEEEEcCccCCh----hcccceeeEeecCC---CCCCCCcHHHHHHHHhh--hcCCC
Q 000997 863 VSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ----ETFARISGYCEQND---IHSPGLTVLESLLFSAW--LRLPS 933 (1194)
Q Consensus 863 ~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~----~~~~~~~gyv~Q~~---~~~~~lTv~e~l~f~~~--lr~~~ 933 (1194)
||||||||||++|+|..++ +.+|+|.++|.++.. ...++.+||++|+. .+++.+||+|++.++.. .....
T Consensus 294 ~NGsGKSTLl~~l~G~~~p-~~~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~l~~~~tv~~~~~~~~~~~~~~~~ 372 (500)
T TIGR02633 294 LVGAGRTELVQALFGAYPG-KFEGNVFINGKPVDIRNPAQAIRAGIAMVPEDRKRHGIVPILGVGKNITLSVLKSFCFKM 372 (500)
T ss_pred CCCCCHHHHHHHHhCCCCC-CCCeEEEECCEECCCCCHHHHHhCCCEEcCcchhhCCcCCCCCHHHHhcchhhhhhccCC
Confidence 9999999999999998652 147999999987632 22356789999995 47889999999987532 11000
Q ss_pred cCcHHHHHHHHHHHHHHcCCCc-ccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHH
Q 000997 934 EIELETQRAFVEEVMELVELTS-LSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSGLDARAAAIVMRTVR 1012 (1194)
Q Consensus 934 ~~~~~~~~~~v~~~l~~l~l~~-~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~ 1012 (1194)
.......++.++++++.+++.+ ..+..+ ..|||||||||+||++|+.+|+||||||||+|||+.++..+++.|+
T Consensus 373 ~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~~LSgGqkqrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~ 447 (500)
T TIGR02633 373 RIDAAAELQIIGSAIQRLKVKTASPFLPI-----GRLSGGNQQKAVLAKMLLTNPRVLILDEPTRGVDVGAKYEIYKLIN 447 (500)
T ss_pred cCCHHHHHHHHHHHHHhcCccCCCccCcc-----ccCCHHHHHHHHHHHHHhhCCCEEEEcCCCCCcCHhHHHHHHHHHH
Confidence 1122333456788999999863 455543 5799999999999999999999999999999999999999999999
Q ss_pred HHHhCCCEEEEEecCCcHHHHHhcCeEEEEccCcEEEEeCCCC
Q 000997 1013 NIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLG 1055 (1194)
Q Consensus 1013 ~l~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~~ 1055 (1194)
+++++|.|||++|||++ .+.+.||++++|.+ |+++..++..
T Consensus 448 ~l~~~g~tviivsHd~~-~~~~~~d~v~~l~~-G~i~~~~~~~ 488 (500)
T TIGR02633 448 QLAQEGVAIIVVSSELA-EVLGLSDRVLVIGE-GKLKGDFVNH 488 (500)
T ss_pred HHHhCCCEEEEECCCHH-HHHHhCCEEEEEEC-CEEEEEEccc
Confidence 99888999999999986 57788999999984 7888877653
No 25
>TIGR03269 met_CoM_red_A2 methyl coenzyme M reductase system, component A2. The enzyme that catalyzes the final step in methanogenesis, methyl coenzyme M reductase, contains alpha, beta, and gamma chains. In older literature, the complex of alpha, beta, and gamma chains was termed component C, while this single chain protein was termed methyl coenzyme M reductase system component A2.
Probab=100.00 E-value=2.5e-63 Score=609.15 Aligned_cols=445 Identities=22% Similarity=0.276 Sum_probs=337.3
Q ss_pred eeeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHhcCc--CCCCceeeEEEECC-----------------------ccC
Q 000997 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRL--GHHLQVSGKITYNG-----------------------HGF 202 (1194)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l--~~~~~~~G~i~~~G-----------------------~~~ 202 (1194)
+++|+|+|+.+.+|++++|+|||||||||||++|+|.+ +|. +|+|.++| .++
T Consensus 13 ~~~l~~is~~i~~Ge~~~iiG~nGsGKSTLl~~l~Gl~~~~p~---~G~i~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~ 89 (520)
T TIGR03269 13 KEVLKNISFTIEEGEVLGILGRSGAGKSVLMHVLRGMDQYEPT---SGRIIYHVALCEKCGYVERPSKVGEPCPVCGGTL 89 (520)
T ss_pred eEeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhhcccCCCC---ceEEEEeccccccccccccccccccccccccccc
Confidence 46999999999999999999999999999999999986 454 89999972 211
Q ss_pred C-------CC------CCCceEEEEecC-CCCCCCCCHHHHHHHhhhccCCCCchhhhHHHHHHHHHhCCCCCchHHHHH
Q 000997 203 K-------EF------VPPRTSAYVSQQ-DWQVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFM 268 (1194)
Q Consensus 203 ~-------~~------~~~~~~~yv~Q~-d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~ 268 (1194)
. .. ..++.++|++|+ +.+++.+||+||+.|.....+...
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~i~~v~q~~~~~~~~~tv~~~l~~~~~~~~~~~--------------------------- 142 (520)
T TIGR03269 90 EPEEVDFWNLSDKLRRRIRKRIAIMLQRTFALYGDDTVLDNVLEALEEIGYEG--------------------------- 142 (520)
T ss_pred cccchhhhccCHHHHHHhhhcEEEEeccccccCCCCCHHHHHHHHHHHcCCCH---------------------------
Confidence 0 00 113568999997 677888999999988643221100
Q ss_pred HHhhccCcchhHHHHHHHHHhCCcccccccccCccCCCCChhhhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHH
Q 000997 269 KSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKY 348 (1194)
Q Consensus 269 k~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~LSGGqkqRvsia~al~~~~~vlllDEptsgLD~~~~~~i~~~ 348 (1194)
.+...+++++++.+||++..+..+ ..|||||||||+||+||+.+|++|||||||+|||+.++.++.+.
T Consensus 143 -------~~~~~~~~~~l~~~gl~~~~~~~~-----~~LSgGq~qrv~iA~al~~~p~lllLDEPt~~LD~~~~~~l~~~ 210 (520)
T TIGR03269 143 -------KEAVGRAVDLIEMVQLSHRITHIA-----RDLSGGEKQRVVLARQLAKEPFLFLADEPTGTLDPQTAKLVHNA 210 (520)
T ss_pred -------HHHHHHHHHHHHHcCChhhhhcCc-----ccCCHHHHHHHHHHHHHhcCCCEEEeeCCcccCCHHHHHHHHHH
Confidence 001234778899999987766655 46999999999999999999999999999999999999999999
Q ss_pred HHHHHhccCCeEEEEEecChhHHHhhcCeEEEEcCCeEEEecChhhHHHHHHhcCCCCCCCCChhHHHHhhcCccccccc
Q 000997 349 LKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEGQIVYQGPRVSVLDFFASMGFSCPKRKNVADFLQEVTSKKDQEQY 428 (1194)
Q Consensus 349 l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~~G~iv~~G~~~~~~~~F~~~G~~cp~~~~~adfl~~v~s~~~~~~~ 428 (1194)
|+++++.. +++|+.++|+...+.++||+|++|++|++++.|+++++...+..
T Consensus 211 l~~l~~~~-g~tviivtHd~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~~~~--------------------------- 262 (520)
T TIGR03269 211 LEEAVKAS-GISMVLTSHWPEVIEDLSDKAIWLENGEIKEEGTPDEVVAVFME--------------------------- 262 (520)
T ss_pred HHHHHHhc-CcEEEEEeCCHHHHHHhcCEEEEEeCCEEeeecCHHHHHHHHHh---------------------------
Confidence 99987543 45566788999999999999999999999988765432110000
Q ss_pred ccCCCCCCcCCChhHHHHHHHhchhccchHHhhcCCccccCCCcCcccCCCCCCcHHHHHHHHHHHHHHHHhcchhHHHH
Q 000997 429 WSNPYLPYRYISPGKFAEAFHSYHTGKNLSEELAVPFDRRFNHPAALSTSKYGEKRSELLKTSFNWQLLLMKRNSFIYVF 508 (1194)
Q Consensus 429 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~R~~~~~~r~~~~~~~ 508 (1194)
T Consensus 263 -------------------------------------------------------------------------------- 262 (520)
T TIGR03269 263 -------------------------------------------------------------------------------- 262 (520)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHcccCCCCCccCcchhHHHHHHHHHHHHHHHHHHHHHHHHhcchhhhhhccccccchhhHHHHHH
Q 000997 509 KFIQLLIVALITMTVFFRTTMHHKTIDDGGLYLGALYFSMVIILFNGFTEVSMLVAKLPVLYKHRDLHFYPSWVYTIPSW 588 (1194)
Q Consensus 509 ~~~~~~~~ali~g~vf~~~~~~~~~~~~~~~~~g~lf~~l~~~~~~~~~~~~~~~~~~~v~~k~r~~~~y~~~ay~l~~~ 588 (1194)
..
T Consensus 263 ---------------------------~~--------------------------------------------------- 264 (520)
T TIGR03269 263 ---------------------------GV--------------------------------------------------- 264 (520)
T ss_pred ---------------------------hc---------------------------------------------------
Confidence 00
Q ss_pred HHHhhHHHHhhhHhhheeeeeccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccChHHHHHHHHHHHHHHHHHhhcc
Q 000997 589 ALSIPTSLIESGFWVAVTYYVIGYDPNVVRFSRQLLLYFFLHQMSIGLFRVIGSLGRNMIVANTFGSFAMLVVMALGGFI 668 (1194)
Q Consensus 589 ~~~iP~~~i~~~i~~~i~Y~~~gl~~~~~~f~~~~l~~~~~~~~~~~l~~~i~~~~~~~~va~~~~~~~~l~~~l~~Gf~ 668 (1194)
+
T Consensus 265 ----~--------------------------------------------------------------------------- 265 (520)
T TIGR03269 265 ----S--------------------------------------------------------------------------- 265 (520)
T ss_pred ----h---------------------------------------------------------------------------
Confidence 0
Q ss_pred ccCCCcchhHHHHHhhcHHHHHHHHHHHhhhcCCcccccCCCCCCchhHHHhhhcCCCCCCccHHHHHHHHHHHHHHHHH
Q 000997 669 ISRDSIPKWWIWGFWVSPLMYAQNAASVNEFLGHSWDKKAGNSNFSLGEAILRQRSLFPESYWYWIGVGAMLGYTLLFNA 748 (1194)
Q Consensus 669 i~~~~ip~~~~w~~~isp~~y~~~al~~nef~~~~~~~~~~~~~~~~g~~~l~~~~~~~~~~~~w~~~g~ll~~~~~f~~ 748 (1194)
.+.. .
T Consensus 266 ----~~~~------------------------------~----------------------------------------- 270 (520)
T TIGR03269 266 ----EVEK------------------------------E----------------------------------------- 270 (520)
T ss_pred ----hhcc------------------------------c-----------------------------------------
Confidence 0000 0
Q ss_pred HHHHHHHhcCCCCCccceechhhhhhHhhhhcCcchhHHhhhhhhcccCccCcccccCCcccccccceeEeecceeeeec
Q 000997 749 LFTFFLSYLNPLGKQQAVVSKKELQERDRRRKGENVVIELREYLQRSSSLNGKYFKQKGMVLPFQPLSMAFGNINYFVDV 828 (1194)
Q Consensus 749 l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 828 (1194)
. . . . . + ..-+.++|+++.++.
T Consensus 271 ---------~---------------------~-------~------~--------~--~------~~~l~~~~l~~~~~~ 291 (520)
T TIGR03269 271 ---------C---------------------E-------V------E--------V--G------EPIIKVRNVSKRYIS 291 (520)
T ss_pred ---------c---------------------c-------c------C--------C--C------CceEEEeccEEEecc
Confidence 0 0 0 0 0 0 001334444443310
Q ss_pred ccccccccccccceEEeeeeeEEEeCCcEEEEEccCCCChHHHHhhhcCCCCCCeeEEEEEEc-Ccc---CCh------h
Q 000997 829 PVELKQEGVLEDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYIS-GYP---KRQ------E 898 (1194)
Q Consensus 829 ~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~-g~~---~~~------~ 898 (1194)
. ..+.+.+|+|+||+|++||++||+||||||||||+++|+|..+ +.+|+|.++ |.+ +.. .
T Consensus 292 ~--------~~~~~~il~~is~~i~~Ge~~~l~G~NGsGKSTLl~~l~Gl~~--p~~G~i~~~~g~~~~~~~~~~~~~~~ 361 (520)
T TIGR03269 292 V--------DRGVVKAVDNVSLEVKEGEIFGIVGTSGAGKTTLSKIIAGVLE--PTSGEVNVRVGDEWVDMTKPGPDGRG 361 (520)
T ss_pred C--------CCCCceEEeeEEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCeEEEEecCCccccccccchhhHH
Confidence 0 0123469999999999999999999999999999999999876 458999996 532 111 1
Q ss_pred cccceeeEeecCCCCCCCCcHHHHHHHHhhhcCCCcCcHHHHHHHHHHHHHHcCCCc-----ccCCcccCCCCCCCCHHH
Q 000997 899 TFARISGYCEQNDIHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTS-----LSGALIGLPGINGLSTEQ 973 (1194)
Q Consensus 899 ~~~~~~gyv~Q~~~~~~~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~-----~~~~~~~~~~~~~LSgGq 973 (1194)
..++.+||++|++.+++.+||.|++.+...+. ......++.++++++.+++.+ ..+.. +..|||||
T Consensus 362 ~~~~~i~~v~q~~~l~~~~tv~e~l~~~~~~~----~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~-----~~~LSgGq 432 (520)
T TIGR03269 362 RAKRYIGILHQEYDLYPHRTVLDNLTEAIGLE----LPDELARMKAVITLKMVGFDEEKAEEILDKY-----PDELSEGE 432 (520)
T ss_pred HHhhhEEEEccCcccCCCCcHHHHHHHHHHcC----CCHHHHHHHHHHHHHhCCCCCccchhhhhCC-----hhhCCHHH
Confidence 23456899999988889999999998754321 122333456788999999965 33443 35899999
Q ss_pred HHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCeEEEEccCcEEEEeC
Q 000997 974 RKRLTIAVELVANPSIVFMDEPTSGLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAG 1052 (1194)
Q Consensus 974 rqrl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~l~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g 1052 (1194)
||||+|||||+.+|+||||||||+|||+.+...+++.|++++++ |.|||++||+++ .+.+.||++++|. +|+++..|
T Consensus 433 ~qrv~laral~~~p~lLllDEPt~~LD~~~~~~l~~~l~~l~~~~g~tvi~vsHd~~-~~~~~~d~i~~l~-~G~i~~~g 510 (520)
T TIGR03269 433 RHRVALAQVLIKEPRIVILDEPTGTMDPITKVDVTHSILKAREEMEQTFIIVSHDMD-FVLDVCDRAALMR-DGKIVKIG 510 (520)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHHcCcEEEEEeCCHH-HHHHhCCEEEEEE-CCEEEEEC
Confidence 99999999999999999999999999999999999999999764 899999999986 4677899999998 47888888
Q ss_pred CC
Q 000997 1053 PL 1054 (1194)
Q Consensus 1053 ~~ 1054 (1194)
+.
T Consensus 511 ~~ 512 (520)
T TIGR03269 511 DP 512 (520)
T ss_pred CH
Confidence 64
No 26
>PRK11288 araG L-arabinose transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.5e-63 Score=605.91 Aligned_cols=452 Identities=20% Similarity=0.282 Sum_probs=340.8
Q ss_pred eeeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCceeeEEEECCccCCCCC----CCceEEEEecCCCCCCC
Q 000997 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV----PPRTSAYVSQQDWQVAE 223 (1194)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~~----~~~~~~yv~Q~d~~~~~ 223 (1194)
.++|+|+|+++++|++++|+|||||||||||++|+|.++|. +|+|.++|.++.... .++.++|++|++.+++.
T Consensus 17 ~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~---~G~I~~~g~~i~~~~~~~~~~~~i~~v~q~~~~~~~ 93 (501)
T PRK11288 17 VKALDDISFDCRAGQVHALMGENGAGKSTLLKILSGNYQPD---AGSILIDGQEMRFASTTAALAAGVAIIYQELHLVPE 93 (501)
T ss_pred EEEEeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCC---CCEEEECCEECCCCCHHHHHhCCEEEEEechhccCC
Confidence 35999999999999999999999999999999999998776 999999998875322 24579999999988999
Q ss_pred CCHHHHHHHhhhccCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhccCcchhHHHHHHHHHhCCcccccccccCcc
Q 000997 224 MTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEM 303 (1194)
Q Consensus 224 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~k~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~ 303 (1194)
+||+||+.++......+. . +. .+....++.+++.+||++..+..++
T Consensus 94 ~tv~~~l~~~~~~~~~~~-~----------------~~--------------~~~~~~~~~~l~~~~l~~~~~~~~~--- 139 (501)
T PRK11288 94 MTVAENLYLGQLPHKGGI-V----------------NR--------------RLLNYEAREQLEHLGVDIDPDTPLK--- 139 (501)
T ss_pred CCHHHHHHhcccccccCC-C----------------CH--------------HHHHHHHHHHHHHcCCCCCcCCchh---
Confidence 999999988532100000 0 00 0012246788999999876666554
Q ss_pred CCCCChhhhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEcC
Q 000997 304 LKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSE 383 (1194)
Q Consensus 304 ~~~LSGGqkqRvsia~al~~~~~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~~ 383 (1194)
.|||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|+++++. +++|+.++|+..++..++|+|++|++
T Consensus 140 --~LSgGq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~--g~tiiiitHd~~~~~~~~d~i~~l~~ 215 (501)
T PRK11288 140 --YLSIGQRQMVEIAKALARNARVIAFDEPTSSLSAREIEQLFRVIRELRAE--GRVILYVSHRMEEIFALCDAITVFKD 215 (501)
T ss_pred --hCCHHHHHHHHHHHHHHhCCCEEEEcCCCCCCCHHHHHHHHHHHHHHHhC--CCEEEEEeCCHHHHHHhCCEEEEEEC
Confidence 69999999999999999999999999999999999999999999998653 45566688999999999999999999
Q ss_pred CeEEEecChhhHHHHHHhcCCCCCCCCChhHHHHhhcCcccccccccCCCCCCcCCChhHHHHHHHhchhccchHHhhcC
Q 000997 384 GQIVYQGPRVSVLDFFASMGFSCPKRKNVADFLQEVTSKKDQEQYWSNPYLPYRYISPGKFAEAFHSYHTGKNLSEELAV 463 (1194)
Q Consensus 384 G~iv~~G~~~~~~~~F~~~G~~cp~~~~~adfl~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 463 (1194)
|+++..++.... . +..+..+.
T Consensus 216 G~i~~~~~~~~~------------------------------~-------------~~~~~~~~---------------- 236 (501)
T PRK11288 216 GRYVATFDDMAQ------------------------------V-------------DRDQLVQA---------------- 236 (501)
T ss_pred CEEEeecCcccc------------------------------C-------------CHHHHHHH----------------
Confidence 999865421000 0 00000000
Q ss_pred CccccCCCcCcccCCCCCCcHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHcccCCCCCccCcchhHHHH
Q 000997 464 PFDRRFNHPAALSTSKYGEKRSELLKTSFNWQLLLMKRNSFIYVFKFIQLLIVALITMTVFFRTTMHHKTIDDGGLYLGA 543 (1194)
Q Consensus 464 ~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~R~~~~~~r~~~~~~~~~~~~~~~ali~g~vf~~~~~~~~~~~~~~~~~g~ 543 (1194)
+....
T Consensus 237 ------------------------------------------------------------~~~~~--------------- 241 (501)
T PRK11288 237 ------------------------------------------------------------MVGRE--------------- 241 (501)
T ss_pred ------------------------------------------------------------hcCCC---------------
Confidence 00000
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcchhhhhhccccccchhhHHHHHHHHHhhHHHHhhhHhhheeeeeccccccHHHHHHHH
Q 000997 544 LYFSMVIILFNGFTEVSMLVAKLPVLYKHRDLHFYPSWVYTIPSWALSIPTSLIESGFWVAVTYYVIGYDPNVVRFSRQL 623 (1194)
Q Consensus 544 lf~~l~~~~~~~~~~~~~~~~~~~v~~k~r~~~~y~~~ay~l~~~~~~iP~~~i~~~i~~~i~Y~~~gl~~~~~~f~~~~ 623 (1194)
T Consensus 242 -------------------------------------------------------------------------------- 241 (501)
T PRK11288 242 -------------------------------------------------------------------------------- 241 (501)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHcccChHHHHHHHHHHHHHHHHHhhccccCCCcchhHHHHHhhcHHHHHHHHHHHhhhcCCc
Q 000997 624 LLYFFLHQMSIGLFRVIGSLGRNMIVANTFGSFAMLVVMALGGFIISRDSIPKWWIWGFWVSPLMYAQNAASVNEFLGHS 703 (1194)
Q Consensus 624 l~~~~~~~~~~~l~~~i~~~~~~~~va~~~~~~~~l~~~l~~Gf~i~~~~ip~~~~w~~~isp~~y~~~al~~nef~~~~ 703 (1194)
... .
T Consensus 242 --------------------------------------------------~~~--------------------------~ 245 (501)
T PRK11288 242 --------------------------------------------------IGD--------------------------I 245 (501)
T ss_pred --------------------------------------------------ccc--------------------------c
Confidence 000 0
Q ss_pred ccccCCCCCCchhHHHhhhcCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccceechhhhhhHhhhhcCcc
Q 000997 704 WDKKAGNSNFSLGEAILRQRSLFPESYWYWIGVGAMLGYTLLFNALFTFFLSYLNPLGKQQAVVSKKELQERDRRRKGEN 783 (1194)
Q Consensus 704 ~~~~~~~~~~~~g~~~l~~~~~~~~~~~~w~~~g~ll~~~~~f~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 783 (1194)
+ . .
T Consensus 246 ~------------------------------------------------------~-----------------------~ 248 (501)
T PRK11288 246 Y------------------------------------------------------G-----------------------Y 248 (501)
T ss_pred c------------------------------------------------------c-----------------------c
Confidence 0 0 0
Q ss_pred hhHHhhhhhhcccCccCcccccCCcccccccceeEeecceeeeecccccccccccccceEEeeeeeEEEeCCcEEEEEcc
Q 000997 784 VVIELREYLQRSSSLNGKYFKQKGMVLPFQPLSMAFGNINYFVDVPVELKQEGVLEDRLQLLVNVTGAFRPGVLTALVGV 863 (1194)
Q Consensus 784 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~ 863 (1194)
. .. . . .+..+.++|+++ ..+++|+|+++++||++||+||
T Consensus 249 ----~------~~--~----~--------~~~~l~~~~~~~-----------------~~~l~~isl~i~~Ge~~~iiG~ 287 (501)
T PRK11288 249 ----R------PR--P----L--------GEVRLRLDGLKG-----------------PGLREPISFSVRAGEIVGLFGL 287 (501)
T ss_pred ----c------cc--C----C--------CCcEEEEecccc-----------------CCcccceeEEEeCCcEEEEEcC
Confidence 0 00 0 0 001233444431 1378999999999999999999
Q ss_pred CCCChHHHHhhhcCCCCCCeeEEEEEEcCccCCh----hcccceeeEeecCC---CCCCCCcHHHHHHHHhhhcC-CCc-
Q 000997 864 SGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ----ETFARISGYCEQND---IHSPGLTVLESLLFSAWLRL-PSE- 934 (1194)
Q Consensus 864 nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~----~~~~~~~gyv~Q~~---~~~~~lTv~e~l~f~~~lr~-~~~- 934 (1194)
||||||||+++|+|..+ +.+|+|.++|+++.. ...++.++|++|++ .+++.+|+.|++.+...... +..
T Consensus 288 NGsGKSTLlk~l~G~~~--p~~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~~~~~tv~e~l~~~~~~~~~~~~~ 365 (501)
T PRK11288 288 VGAGRSELMKLLYGATR--RTAGQVYLDGKPIDIRSPRDAIRAGIMLCPEDRKAEGIIPVHSVADNINISARRHHLRAGC 365 (501)
T ss_pred CCCCHHHHHHHHcCCCc--CCCceEEECCEECCCCCHHHHHhCCCEEcCcCHhhCCCcCCCCHHHHhccccchhhccccc
Confidence 99999999999999876 468999999986532 12345789999985 47888999999987532111 000
Q ss_pred -CcHHHHHHHHHHHHHHcCCC-cccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHH
Q 000997 935 -IELETQRAFVEEVMELVELT-SLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSGLDARAAAIVMRTVR 1012 (1194)
Q Consensus 935 -~~~~~~~~~v~~~l~~l~l~-~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~ 1012 (1194)
......++.++++++.+++. +..+..+ ..|||||||||+||++|+.+|+||||||||+|||+.+...++++|+
T Consensus 366 ~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~~LSgGq~qrl~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~ 440 (501)
T PRK11288 366 LINNRWEAENADRFIRSLNIKTPSREQLI-----MNLSGGNQQKAILGRWLSEDMKVILLDEPTRGIDVGAKHEIYNVIY 440 (501)
T ss_pred ccChHHHHHHHHHHHHhcCcccCCccCcc-----ccCCHHHHHHHHHHHHHccCCCEEEEcCCCCCCCHhHHHHHHHHHH
Confidence 01222335678899999994 5566543 5899999999999999999999999999999999999999999999
Q ss_pred HHHhCCCEEEEEecCCcHHHHHhcCeEEEEccCcEEEEeCCCCCc
Q 000997 1013 NIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLGSK 1057 (1194)
Q Consensus 1013 ~l~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~~~~ 1057 (1194)
+++++|.|||++|||++ .+.+.+|++++|. +|++++.|..++.
T Consensus 441 ~l~~~g~tviivsHd~~-~~~~~~d~i~~l~-~g~i~~~~~~~~~ 483 (501)
T PRK11288 441 ELAAQGVAVLFVSSDLP-EVLGVADRIVVMR-EGRIAGELAREQA 483 (501)
T ss_pred HHHhCCCEEEEECCCHH-HHHhhCCEEEEEE-CCEEEEEEccccC
Confidence 99888999999999986 5778899999998 5789999977643
No 27
>PTZ00243 ABC transporter; Provisional
Probab=100.00 E-value=1.4e-62 Score=658.11 Aligned_cols=210 Identities=21% Similarity=0.256 Sum_probs=175.8
Q ss_pred eeEeecceeeeecccccccccccccceEEeeeeeEEEeCCcEEEEEccCCCChHHHHhhhcCCCCCCeeEEEEEEcCccC
Q 000997 816 SMAFGNINYFVDVPVELKQEGVLEDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPK 895 (1194)
Q Consensus 816 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 895 (1194)
.+.|+|+++.++. +...+|+||||+|+|||++||+|+||||||||+++|.|... +.+|+|.|||.++
T Consensus 1308 ~I~f~nVsf~Y~~-----------~~~~vL~~vsf~I~~GekVaIVGrTGSGKSTLl~lLlrl~~--p~~G~I~IDG~di 1374 (1560)
T PTZ00243 1308 SLVFEGVQMRYRE-----------GLPLVLRGVSFRIAPREKVGIVGRTGSGKSTLLLTFMRMVE--VCGGEIRVNGREI 1374 (1560)
T ss_pred eEEEEEEEEEeCC-----------CCCceeecceEEECCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEEc
Confidence 5888888887631 22469999999999999999999999999999999999876 5689999999987
Q ss_pred C---hhcccceeeEeecCCCCCCCCcHHHHHHHHhhhcCCCcCcHHHHHHHHHHHHHHcCCCcc-------cCCcccCCC
Q 000997 896 R---QETFARISGYCEQNDIHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSL-------SGALIGLPG 965 (1194)
Q Consensus 896 ~---~~~~~~~~gyv~Q~~~~~~~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~-------~~~~~~~~~ 965 (1194)
. ...+++.+|||||++.+|.+ |++|||... ...+ ++.++++++..++.+. .|+.++..
T Consensus 1375 ~~i~l~~LR~~I~iVpQdp~LF~g-TIreNIdp~------~~~s----deeI~~Al~~a~l~~~I~~lp~Gldt~vge~- 1442 (1560)
T PTZ00243 1375 GAYGLRELRRQFSMIPQDPVLFDG-TVRQNVDPF------LEAS----SAEVWAALELVGLRERVASESEGIDSRVLEG- 1442 (1560)
T ss_pred ccCCHHHHHhcceEECCCCccccc-cHHHHhCcc------cCCC----HHHHHHHHHHCCChHHHhhCcccccccccCC-
Confidence 5 35678899999999999976 999999531 1222 2457888888887654 24455543
Q ss_pred CCCCCHHHHHHHHHHHHHhhC-CCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCeEEEEcc
Q 000997 966 INGLSTEQRKRLTIAVELVAN-PSIVFMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKR 1044 (1194)
Q Consensus 966 ~~~LSgGqrqrl~ia~aL~~~-p~illLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~ 1044 (1194)
..+||||||||++|||||+++ |+||+||||||+||+.+.+.|++.|++.. +++|||+|+|+++ ....||+|++|+
T Consensus 1443 G~nLSgGQrQrLaLARALL~~~~~ILlLDEATSaLD~~te~~Iq~~L~~~~-~~~TvI~IAHRl~--ti~~~DrIlVLd- 1518 (1560)
T PTZ00243 1443 GSNYSVGQRQLMCMARALLKKGSGFILMDEATANIDPALDRQIQATVMSAF-SAYTVITIAHRLH--TVAQYDKIIVMD- 1518 (1560)
T ss_pred cCcCCHHHHHHHHHHHHHhcCCCCEEEEeCCCccCCHHHHHHHHHHHHHHC-CCCEEEEEeccHH--HHHhCCEEEEEE-
Confidence 357999999999999999996 89999999999999999999999999864 5899999999964 667899999998
Q ss_pred CcEEEEeCCC
Q 000997 1045 GGELIYAGPL 1054 (1194)
Q Consensus 1045 gG~~~~~g~~ 1054 (1194)
+|+++..|+.
T Consensus 1519 ~G~VvE~Gt~ 1528 (1560)
T PTZ00243 1519 HGAVAEMGSP 1528 (1560)
T ss_pred CCEEEEECCH
Confidence 5899999975
No 28
>TIGR01271 CFTR_protein cystic fibrosis transmembrane conductor regulator (CFTR). The model describes the cystis fibrosis transmembrane conductor regulator (CFTR) in eukaryotes. The principal role of this protein is chloride ion conductance. The protein is predicted to consist of 12 transmembrane domains. Mutations or lesions in the genetic loci have been linked to the aetiology of asthma, bronchiectasis, chronic obstructive pulmonary disease etc. Disease-causing mutations have been studied by 36Cl efflux assays in vitro cell cultures and electrophysiology, all of which point to the impairment of chloride channel stability and not the biosynthetic processing per se.
Probab=100.00 E-value=4.5e-62 Score=653.26 Aligned_cols=209 Identities=20% Similarity=0.266 Sum_probs=175.1
Q ss_pred eeEeecceeeeecccccccccccccceEEeeeeeEEEeCCcEEEEEccCCCChHHHHhhhcCCCCCCeeEEEEEEcCccC
Q 000997 816 SMAFGNINYFVDVPVELKQEGVLEDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPK 895 (1194)
Q Consensus 816 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 895 (1194)
.+.|+|+++.++. +.+.+|+||||+|+|||++||+|+||||||||+++|+|... .+|+|.|||.++
T Consensus 1217 ~I~f~nVs~~Y~~-----------~~~~vL~~is~~I~~GekvaIvGrSGsGKSTLl~lL~rl~~---~~G~I~IdG~di 1282 (1490)
T TIGR01271 1217 QMDVQGLTAKYTE-----------AGRAVLQDLSFSVEGGQRVGLLGRTGSGKSTLLSALLRLLS---TEGEIQIDGVSW 1282 (1490)
T ss_pred eEEEEEEEEEeCC-----------CCcceeeccEEEEcCCCEEEEECCCCCCHHHHHHHHhhhcC---CCcEEEECCEEc
Confidence 5788998887731 23579999999999999999999999999999999999864 479999999987
Q ss_pred Ch---hcccceeeEeecCCCCCCCCcHHHHHHHHhhhcCCCcCcHHHHHHHHHHHHHHcCCCcc-------cCCcccCCC
Q 000997 896 RQ---ETFARISGYCEQNDIHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSL-------SGALIGLPG 965 (1194)
Q Consensus 896 ~~---~~~~~~~gyv~Q~~~~~~~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~-------~~~~~~~~~ 965 (1194)
.. ..+++.++||||++.++++ |+||||.... .. .++.++++++.+++.+. .|+.++. +
T Consensus 1283 ~~i~~~~lR~~is~IpQdp~LF~G-TIR~NLdp~~------~~----tdeei~~aL~~~~L~~~i~~lp~GLdt~v~e-~ 1350 (1490)
T TIGR01271 1283 NSVTLQTWRKAFGVIPQKVFIFSG-TFRKNLDPYE------QW----SDEEIWKVAEEVGLKSVIEQFPDKLDFVLVD-G 1350 (1490)
T ss_pred ccCCHHHHHhceEEEeCCCccCcc-CHHHHhCccc------CC----CHHHHHHHHHHCCCHHHHHhCcccccccccc-C
Confidence 53 4578899999999999986 9999995321 11 23457888888887543 3444544 3
Q ss_pred CCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCeEEEEccC
Q 000997 966 INGLSTEQRKRLTIAVELVANPSIVFMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRG 1045 (1194)
Q Consensus 966 ~~~LSgGqrqrl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~g 1045 (1194)
..+||||||||+||||||+++|+||+||||||+||+.+...|++.|++.. +++|||+++|+++ ....||+|++|++
T Consensus 1351 G~nLSgGQrQrL~LARALLr~~~ILlLDEaTS~lD~~Te~~I~~~L~~~~-~~~TvI~IaHRl~--ti~~~DrIlvL~~- 1426 (1490)
T TIGR01271 1351 GYVLSNGHKQLMCLARSILSKAKILLLDEPSAHLDPVTLQIIRKTLKQSF-SNCTVILSEHRVE--ALLECQQFLVIEG- 1426 (1490)
T ss_pred CCcCCHHHHHHHHHHHHHhCCCCEEEEeCCcccCCHHHHHHHHHHHHHHc-CCCEEEEEecCHH--HHHhCCEEEEEEC-
Confidence 35799999999999999999999999999999999999999999999864 5899999999975 5677999999985
Q ss_pred cEEEEeCCC
Q 000997 1046 GELIYAGPL 1054 (1194)
Q Consensus 1046 G~~~~~g~~ 1054 (1194)
|+++..|++
T Consensus 1427 G~ivE~g~p 1435 (1490)
T TIGR01271 1427 SSVKQYDSI 1435 (1490)
T ss_pred CEEEEeCCH
Confidence 799988875
No 29
>PRK10982 galactose/methyl galaxtoside transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3e-62 Score=595.52 Aligned_cols=450 Identities=18% Similarity=0.260 Sum_probs=337.4
Q ss_pred eeeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCceeeEEEECCccCCCCC----CCceEEEEecCCCCCCC
Q 000997 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV----PPRTSAYVSQQDWQVAE 223 (1194)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~~----~~~~~~yv~Q~d~~~~~ 223 (1194)
+++|+|+|+.+++|++++|+|||||||||||++|+|.++|. +|+|.++|+++.... .++.++|++|++.+++.
T Consensus 11 ~~il~~vs~~i~~Ge~~~liG~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~ 87 (491)
T PRK10982 11 VKALDNVNLKVRPHSIHALMGENGAGKSTLLKCLFGIYQKD---SGSILFQGKEIDFKSSKEALENGISMVHQELNLVLQ 87 (491)
T ss_pred EEeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCC---ceEEEECCEECCCCCHHHHHhCCEEEEecccccccC
Confidence 46999999999999999999999999999999999998876 999999998875432 13569999999988999
Q ss_pred CCHHHHHHHhhh-ccCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhccCcchhHHHHHHHHHhCCcccccccccCc
Q 000997 224 MTVRETLDFAGQ-CQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDE 302 (1194)
Q Consensus 224 lTV~E~l~f~~~-~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~k~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~ 302 (1194)
+||+||+.++.. ..+.. .+ . .+....++.+++.+||.+..++.++
T Consensus 88 ~tv~~~l~~~~~~~~~~~--~~----------------~--------------~~~~~~~~~~l~~~~l~~~~~~~~~-- 133 (491)
T PRK10982 88 RSVMDNMWLGRYPTKGMF--VD----------------Q--------------DKMYRDTKAIFDELDIDIDPRAKVA-- 133 (491)
T ss_pred CCHHHHhhcccccccccc--cC----------------H--------------HHHHHHHHHHHHHcCCCCCccCchh--
Confidence 999999987531 11000 00 0 0011246788999999877776654
Q ss_pred cCCCCChhhhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEc
Q 000997 303 MLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLS 382 (1194)
Q Consensus 303 ~~~~LSGGqkqRvsia~al~~~~~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~ 382 (1194)
.|||||||||+||+||+.+|++|+|||||+|||+.+..++.+.|+++++. +.+|+.++|+.+++.++||+|++|+
T Consensus 134 ---~LSgGq~qrv~lA~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~--g~tvii~tH~~~~~~~~~d~i~~l~ 208 (491)
T PRK10982 134 ---TLSVSQMQMIEIAKAFSYNAKIVIMDEPTSSLTEKEVNHLFTIIRKLKER--GCGIVYISHKMEEIFQLCDEITILR 208 (491)
T ss_pred ---hCCHHHHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC--CCEEEEEecCHHHHHHhCCEEEEEE
Confidence 59999999999999999999999999999999999999999999998653 4456668899999999999999999
Q ss_pred CCeEEEecChhhHHHHHHhcCCCCCCCCChhHHHHhhcCcccccccccCCCCCCcCCChhHHHHHHHhchhccchHHhhc
Q 000997 383 EGQIVYQGPRVSVLDFFASMGFSCPKRKNVADFLQEVTSKKDQEQYWSNPYLPYRYISPGKFAEAFHSYHTGKNLSEELA 462 (1194)
Q Consensus 383 ~G~iv~~G~~~~~~~~F~~~G~~cp~~~~~adfl~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 462 (1194)
+|+++..|+.+++.. .+..+.
T Consensus 209 ~G~i~~~~~~~~~~~--------------------------------------------~~~~~~--------------- 229 (491)
T PRK10982 209 DGQWIATQPLAGLTM--------------------------------------------DKIIAM--------------- 229 (491)
T ss_pred CCEEEeecChhhCCH--------------------------------------------HHHHHH---------------
Confidence 999998876432100 000000
Q ss_pred CCccccCCCcCcccCCCCCCcHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHcccCCCCCccCcchhHHH
Q 000997 463 VPFDRRFNHPAALSTSKYGEKRSELLKTSFNWQLLLMKRNSFIYVFKFIQLLIVALITMTVFFRTTMHHKTIDDGGLYLG 542 (1194)
Q Consensus 463 ~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~R~~~~~~r~~~~~~~~~~~~~~~ali~g~vf~~~~~~~~~~~~~~~~~g 542 (1194)
+....
T Consensus 230 -------------------------------------------------------------~~~~~-------------- 234 (491)
T PRK10982 230 -------------------------------------------------------------MVGRS-------------- 234 (491)
T ss_pred -------------------------------------------------------------HhCCC--------------
Confidence 00000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcchhhhhhccccccchhhHHHHHHHHHhhHHHHhhhHhhheeeeeccccccHHHHHHH
Q 000997 543 ALYFSMVIILFNGFTEVSMLVAKLPVLYKHRDLHFYPSWVYTIPSWALSIPTSLIESGFWVAVTYYVIGYDPNVVRFSRQ 622 (1194)
Q Consensus 543 ~lf~~l~~~~~~~~~~~~~~~~~~~v~~k~r~~~~y~~~ay~l~~~~~~iP~~~i~~~i~~~i~Y~~~gl~~~~~~f~~~ 622 (1194)
T Consensus 235 -------------------------------------------------------------------------------- 234 (491)
T PRK10982 235 -------------------------------------------------------------------------------- 234 (491)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHcccChHHHHHHHHHHHHHHHHHhhccccCCCcchhHHHHHhhcHHHHHHHHHHHhhhcCC
Q 000997 623 LLLYFFLHQMSIGLFRVIGSLGRNMIVANTFGSFAMLVVMALGGFIISRDSIPKWWIWGFWVSPLMYAQNAASVNEFLGH 702 (1194)
Q Consensus 623 ~l~~~~~~~~~~~l~~~i~~~~~~~~va~~~~~~~~l~~~l~~Gf~i~~~~ip~~~~w~~~isp~~y~~~al~~nef~~~ 702 (1194)
+.
T Consensus 235 ---------------------------------------------------~~--------------------------- 236 (491)
T PRK10982 235 ---------------------------------------------------LT--------------------------- 236 (491)
T ss_pred ---------------------------------------------------cc---------------------------
Confidence 00
Q ss_pred cccccCCCCCCchhHHHhhhcCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccceechhhhhhHhhhhcCc
Q 000997 703 SWDKKAGNSNFSLGEAILRQRSLFPESYWYWIGVGAMLGYTLLFNALFTFFLSYLNPLGKQQAVVSKKELQERDRRRKGE 782 (1194)
Q Consensus 703 ~~~~~~~~~~~~~g~~~l~~~~~~~~~~~~w~~~g~ll~~~~~f~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 782 (1194)
. .
T Consensus 237 --~------------------~---------------------------------------------------------- 238 (491)
T PRK10982 237 --Q------------------R---------------------------------------------------------- 238 (491)
T ss_pred --c------------------c----------------------------------------------------------
Confidence 0 0
Q ss_pred chhHHhhhhhhcccCccCcccccCCcccccccceeEeecceeeeecccccccccccccceEEeeeeeEEEeCCcEEEEEc
Q 000997 783 NVVIELREYLQRSSSLNGKYFKQKGMVLPFQPLSMAFGNINYFVDVPVELKQEGVLEDRLQLLVNVTGAFRPGVLTALVG 862 (1194)
Q Consensus 783 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G 862 (1194)
.+. .. .. + .+..+.++|+++. .+.+|+|||+.+++||++||+|
T Consensus 239 -----~~~----~~-~~----~--------~~~~i~~~~l~~~---------------~~~~l~~vsl~i~~Ge~~~l~G 281 (491)
T PRK10982 239 -----FPD----KE-NK----P--------GEVILEVRNLTSL---------------RQPSIRDVSFDLHKGEILGIAG 281 (491)
T ss_pred -----ccc----cc-CC----C--------CCcEEEEeCcccc---------------cCcccceeeEEEeCCcEEEEec
Confidence 000 00 00 0 0012444555432 1248999999999999999999
Q ss_pred cCCCChHHHHhhhcCCCCCCeeEEEEEEcCccCChh----cccceeeEeecCC---CCCCCCcHHHHHHHHhh--hcCCC
Q 000997 863 VSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQE----TFARISGYCEQND---IHSPGLTVLESLLFSAW--LRLPS 933 (1194)
Q Consensus 863 ~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~----~~~~~~gyv~Q~~---~~~~~lTv~e~l~f~~~--lr~~~ 933 (1194)
|||||||||+++|+|..+ +.+|+|.++|.++... ..++.+||++|+. .+++.+|+.++..+... .....
T Consensus 282 ~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~i~~~~~~~~~~~~i~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 359 (491)
T PRK10982 282 LVGAKRTDIVETLFGIRE--KSAGTITLHGKKINNHNANEAINHGFALVTEERRSTGIYAYLDIGFNSLISNIRNYKNKV 359 (491)
T ss_pred CCCCCHHHHHHHHcCCCc--CCccEEEECCEECCCCCHHHHHHCCCEEcCCchhhCCcccCCcHHHheehhhhhhhcccc
Confidence 999999999999999876 4689999999876421 2345689999985 35788888877433210 00000
Q ss_pred c-CcHHHHHHHHHHHHHHcCCC-cccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHH
Q 000997 934 E-IELETQRAFVEEVMELVELT-SLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSGLDARAAAIVMRTV 1011 (1194)
Q Consensus 934 ~-~~~~~~~~~v~~~l~~l~l~-~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l 1011 (1194)
. .......+.++++++.+++. +..+.. +..|||||||||+||++|+.+|+||||||||+|||+.++..+++.|
T Consensus 360 ~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~~LSgGq~qrv~la~al~~~p~illLDEPt~gLD~~~~~~~~~~l 434 (491)
T PRK10982 360 GLLDNSRMKSDTQWVIDSMRVKTPGHRTQ-----IGSLSGGNQQKVIIGRWLLTQPEILMLDEPTRGIDVGAKFEIYQLI 434 (491)
T ss_pred cccCcHHHHHHHHHHHHhcCccCCCcccc-----cccCCcHHHHHHHHHHHHhcCCCEEEEcCCCcccChhHHHHHHHHH
Confidence 1 11223345677888888885 344443 3589999999999999999999999999999999999999999999
Q ss_pred HHHHhCCCEEEEEecCCcHHHHHhcCeEEEEccCcEEEEeCCCC
Q 000997 1012 RNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLG 1055 (1194)
Q Consensus 1012 ~~l~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~~ 1055 (1194)
+++.++|.|||++|||++ ++.+.||++++|.+ |+++..++..
T Consensus 435 ~~l~~~~~tvi~vsHd~~-~~~~~~d~v~~l~~-g~i~~~~~~~ 476 (491)
T PRK10982 435 AELAKKDKGIIIISSEMP-ELLGITDRILVMSN-GLVAGIVDTK 476 (491)
T ss_pred HHHHHCCCEEEEECCChH-HHHhhCCEEEEEEC-CEEEEEEccc
Confidence 999888999999999986 57788999999985 7888777654
No 30
>KOG0061 consensus Transporter, ABC superfamily (Breast cancer resistance protein) [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=1.2e-62 Score=603.39 Aligned_cols=358 Identities=38% Similarity=0.648 Sum_probs=303.3
Q ss_pred ccceeEeecceeeeecccccccccccccceEEeeeeeEEEeCCcEEEEEccCCCChHHHHhhhcCCCCCC-eeEEEEEEc
Q 000997 813 QPLSMAFGNINYFVDVPVELKQEGVLEDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGG-IIEGDIYIS 891 (1194)
Q Consensus 813 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~-~~~G~i~i~ 891 (1194)
.++.+.|+++++..+.+.. ..+++|+|||++++|||++||||||||||||||++|+|+..++ ..+|+|.+|
T Consensus 22 ~~~~~~~~~~~~~~~~~~~--------~~k~iL~~vsg~~~~Gel~AimG~SGsGKtTLL~~Lagr~~~~~~~~G~ilvN 93 (613)
T KOG0061|consen 22 EPVKLSFRNLTLSSKEKSK--------KTKTILKGVSGTAKPGELLAIMGPSGSGKTTLLNALAGRLNGGLKLSGEILLN 93 (613)
T ss_pred ccceeEEEEEEEEecCCCC--------ccceeeeCcEEEEecCeEEEEECCCCCCHHHHHHHHhccccCCCcceEEEEEC
Confidence 4567889998887643211 4578999999999999999999999999999999999998764 689999999
Q ss_pred CccCChhcccceeeEeecCCCCCCCCcHHHHHHHHhhhcCCCcCcHHHHHHHHHHHHHHcCCCcccCCcccCCCCCCCCH
Q 000997 892 GYPKRQETFARISGYCEQNDIHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLST 971 (1194)
Q Consensus 892 g~~~~~~~~~~~~gyv~Q~~~~~~~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSg 971 (1194)
|++...+.+++.+|||+|+|.++|++||+|++.|+|.+|+|...+.++++++|+++++.++|.+++|+++|.+..+++||
T Consensus 94 G~~~~~~~~~~~s~yV~QdD~l~~~LTV~EtL~f~A~lrlp~~~~~~~k~~~V~~vi~~LgL~~~~~t~ig~~~~rgiSG 173 (613)
T KOG0061|consen 94 GRPRDSRSFRKISGYVQQDDVLLPTLTVRETLRFSALLRLPSSLSKEEKRERVEEVISELGLEKCADTLIGNPGIRGLSG 173 (613)
T ss_pred CccCchhhhhheeEEEcccccccccccHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCChhhccceecCCCCCcccc
Confidence 98888888999999999999999999999999999999999988999999999999999999999999999888899999
Q ss_pred HHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCeEEEEccCcEEEEe
Q 000997 972 EQRKRLTIAVELVANPSIVFMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYA 1051 (1194)
Q Consensus 972 Gqrqrl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~ 1051 (1194)
||||||+||.+|+.||+||||||||||||+.++..++++|+++|++|+|||||+|||+.++++.||++++|.+ |+++|+
T Consensus 174 GErkRvsia~Ell~~P~iLflDEPTSGLDS~sA~~vv~~Lk~lA~~grtVi~tIHQPss~lf~lFD~l~lLs~-G~~vy~ 252 (613)
T KOG0061|consen 174 GERKRVSIALELLTDPSILFLDEPTSGLDSFSALQVVQLLKRLARSGRTVICTIHQPSSELFELFDKLLLLSE-GEVVYS 252 (613)
T ss_pred chhhHHHHHHHHHcCCCEEEecCCCCCcchhhHHHHHHHHHHHHhCCCEEEEEEeCCcHHHHHHHhHhhhhcC-CcEEEe
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999995 699999
Q ss_pred CCCCCchhHHHHHHHhcCCCCCCCCCCCccccchhccCcc-ccccccCcHHHHHhh------cHHHHHHH-HHHHhhCCC
Q 000997 1052 GPLGSKSCELIKYFEAVEGVPKIRPGYNPAAWMLEVTSPV-EESRLGVDFAEIYRR------SNLFQRNR-ELVESLSKP 1123 (1194)
Q Consensus 1052 g~~~~~~~~~~~~f~~~~g~~~~~~~~npa~~~l~~~~~~-~~~~~~~~~~~~~~~------s~~~~~~~-~~~~~~~~~ 1123 (1194)
|+. +++.+||++. |. +||+++|||||++|+++.. ..+.. ....+.++. .+...+.. .....+...
T Consensus 253 G~~----~~~~~ff~~~-G~-~~P~~~Npadf~l~l~s~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (613)
T KOG0061|consen 253 GSP----RELLEFFSSL-GF-PCPELENPADFLLDLLSVDSGTREL-EEAVRIAKLINKFSQTDNLKKTLEALEKSLSTS 325 (613)
T ss_pred cCH----HHHHHHHHhC-CC-CCCCcCChHHHHHHHHccCCCchhH-HhHHHHHHHhhhccccchhhhhHHHHhhhcccc
Confidence 997 5799999999 54 6999999999999998842 11000 011111111 11111110 001111111
Q ss_pred CCCCcCCCCCccccCCHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHhccCCCCcccccc
Q 000997 1124 SPSSKKLNFSTKYSQSFANQFLACLRKQNLSYWRNPQYTAVRFFYTVVISLMLGSICWKFGAKRFAIKV 1192 (1194)
Q Consensus 1124 ~~~~~~~~~~~~~~~~~~~q~~~l~~r~~~~~~R~~~~~~~r~~~~~~~~l~~g~~f~~~~~~~~~~~~ 1192 (1194)
. + .+....++||.|++.|++|.+++.+|+|.+...|+++.+++|+++|++||+++++..++++
T Consensus 326 ~----~--~~~~~~~s~~~q~~~L~~R~~~~~~R~~~~~~~r~~~~~~~~~~lg~~~~~~~~~~~~~~~ 388 (613)
T KOG0061|consen 326 K----K--VEIGTSPSWWTQFKILLKRSLKNIRRDPSLLLLRLIQSLVTGLLLGLLYLNLGNDAKGIQN 388 (613)
T ss_pred c----c--cccccCCcHHHHHHHHHHHHhHHHhhcHHHHHHHHHHHHHHHHHHHHHhhCCCCchHHHHH
Confidence 1 0 1112279999999999999999999999999999999999999999999999999888764
No 31
>PRK10938 putative molybdenum transport ATP-binding protein ModF; Provisional
Probab=100.00 E-value=5.9e-61 Score=584.37 Aligned_cols=446 Identities=19% Similarity=0.270 Sum_probs=324.6
Q ss_pred eeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCceeeEEEECCccCCCCC---CCceEEEEecCCCC--C--
Q 000997 149 TILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV---PPRTSAYVSQQDWQ--V-- 221 (1194)
Q Consensus 149 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~~---~~~~~~yv~Q~d~~--~-- 221 (1194)
.+|+|+|+++++|++++|+|||||||||||++|+|.++|. +|+|.++|.++.... .++.++|++|++.. +
T Consensus 17 ~il~~vsl~i~~Ge~~~liG~nGsGKSTLl~~l~G~~~p~---~G~i~~~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~~ 93 (490)
T PRK10938 17 KTLQLPSLTLNAGDSWAFVGANGSGKSALARALAGELPLL---SGERQSQFSHITRLSFEQLQKLVSDEWQRNNTDMLSP 93 (490)
T ss_pred eecccceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCC---CceEEECCcccccCCHHHHHHHhceeccCcchhhccc
Confidence 5999999999999999999999999999999999998876 899999997654322 12458999998542 1
Q ss_pred ----CCCCHHHHHHHhhhccCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhccCcchhHHHHHHHHHhCCcccccc
Q 000997 222 ----AEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADT 297 (1194)
Q Consensus 222 ----~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~k~~~~~~~~~~~~~~~~l~~lgL~~~~dt 297 (1194)
..+||+|++.+.. ....+++.+++.+||++..+.
T Consensus 94 ~~~~~~~~~~~~~~~~~------------------------------------------~~~~~~~~~l~~~~l~~~~~~ 131 (490)
T PRK10938 94 GEDDTGRTTAEIIQDEV------------------------------------------KDPARCEQLAQQFGITALLDR 131 (490)
T ss_pred chhhccccHHHhcccch------------------------------------------hHHHHHHHHHHHcCCHhhhhC
Confidence 1467777764310 001236778999999887777
Q ss_pred cccCccCCCCChhhhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCe
Q 000997 298 LVGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDD 377 (1194)
Q Consensus 298 ~vg~~~~~~LSGGqkqRvsia~al~~~~~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~ 377 (1194)
.++ .|||||||||+||+||+.+|++|+|||||+|||+.++.++.+.|+++++. +++|+.++|+..++.++||+
T Consensus 132 ~~~-----~LSgG~~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~--g~tvii~tH~~~~~~~~~d~ 204 (490)
T PRK10938 132 RFK-----YLSTGETRKTLLCQALMSEPDLLILDEPFDGLDVASRQQLAELLASLHQS--GITLVLVLNRFDEIPDFVQF 204 (490)
T ss_pred Ccc-----cCCHHHHHHHHHHHHHHcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhc--CCeEEEEeCCHHHHHhhCCE
Confidence 665 59999999999999999999999999999999999999999999998753 45566688899999999999
Q ss_pred EEEEcCCeEEEecChhhHHHHHHhcCCCCCCCCChhHHHHhhcCcccccccccCCCCCCcCCChhHHHHHHHhchhccch
Q 000997 378 VILLSEGQIVYQGPRVSVLDFFASMGFSCPKRKNVADFLQEVTSKKDQEQYWSNPYLPYRYISPGKFAEAFHSYHTGKNL 457 (1194)
Q Consensus 378 vilL~~G~iv~~G~~~~~~~~F~~~G~~cp~~~~~adfl~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 457 (1194)
|++|++|++++.|+++++.. . +.+.... .
T Consensus 205 v~~l~~G~i~~~~~~~~~~~-----------~----~~~~~~~-----------------------------~------- 233 (490)
T PRK10938 205 AGVLADCTLAETGEREEILQ-----------Q----ALVAQLA-----------------------------H------- 233 (490)
T ss_pred EEEEECCEEEEeCCHHHHhc-----------c----hhhhhhh-----------------------------h-------
Confidence 99999999999887654310 0 0000000 0
Q ss_pred HHhhcCCccccCCCcCcccCCCCCCcHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHcccCCCCCccCcc
Q 000997 458 SEELAVPFDRRFNHPAALSTSKYGEKRSELLKTSFNWQLLLMKRNSFIYVFKFIQLLIVALITMTVFFRTTMHHKTIDDG 537 (1194)
Q Consensus 458 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~R~~~~~~r~~~~~~~~~~~~~~~ali~g~vf~~~~~~~~~~~~~ 537 (1194)
. .....
T Consensus 234 ------------------------------------~-------------------------------------~~~~~- 239 (490)
T PRK10938 234 ------------------------------------S-------------------------------------EQLEG- 239 (490)
T ss_pred ------------------------------------h-------------------------------------hccCc-
Confidence 0 00000
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhcchhhhhhccccccchhhHHHHHHHHHhhHHHHhhhHhhheeeeeccccccHH
Q 000997 538 GLYLGALYFSMVIILFNGFTEVSMLVAKLPVLYKHRDLHFYPSWVYTIPSWALSIPTSLIESGFWVAVTYYVIGYDPNVV 617 (1194)
Q Consensus 538 ~~~~g~lf~~l~~~~~~~~~~~~~~~~~~~v~~k~r~~~~y~~~ay~l~~~~~~iP~~~i~~~i~~~i~Y~~~gl~~~~~ 617 (1194)
.
T Consensus 240 ------------------------------------------------------~------------------------- 240 (490)
T PRK10938 240 ------------------------------------------------------V------------------------- 240 (490)
T ss_pred ------------------------------------------------------c-------------------------
Confidence 0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcccChHHHHHHHHHHHHHHHHHhhccccCCCcchhHHHHHhhcHHHHHHHHHHHh
Q 000997 618 RFSRQLLLYFFLHQMSIGLFRVIGSLGRNMIVANTFGSFAMLVVMALGGFIISRDSIPKWWIWGFWVSPLMYAQNAASVN 697 (1194)
Q Consensus 618 ~f~~~~l~~~~~~~~~~~l~~~i~~~~~~~~va~~~~~~~~l~~~l~~Gf~i~~~~ip~~~~w~~~isp~~y~~~al~~n 697 (1194)
..|
T Consensus 241 -------------------------------------------------------~~~---------------------- 243 (490)
T PRK10938 241 -------------------------------------------------------QLP---------------------- 243 (490)
T ss_pred -------------------------------------------------------ccC----------------------
Confidence 000
Q ss_pred hhcCCcccccCCCCCCchhHHHhhhcCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccceechhhhhhHhh
Q 000997 698 EFLGHSWDKKAGNSNFSLGEAILRQRSLFPESYWYWIGVGAMLGYTLLFNALFTFFLSYLNPLGKQQAVVSKKELQERDR 777 (1194)
Q Consensus 698 ef~~~~~~~~~~~~~~~~g~~~l~~~~~~~~~~~~w~~~g~ll~~~~~f~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 777 (1194)
.. ..
T Consensus 244 ------------~~--------------------------------------------------------~~-------- 247 (490)
T PRK10938 244 ------------EP--------------------------------------------------------DE-------- 247 (490)
T ss_pred ------------cc--------------------------------------------------------cc--------
Confidence 00 00
Q ss_pred hhcCcchhHHhhhhhhcccCccCcccccCCcccccccceeEeecceeeeecccccccccccccceEEeeeeeEEEeCCcE
Q 000997 778 RRKGENVVIELREYLQRSSSLNGKYFKQKGMVLPFQPLSMAFGNINYFVDVPVELKQEGVLEDRLQLLVNVTGAFRPGVL 857 (1194)
Q Consensus 778 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~ 857 (1194)
.. . .. . .+. ....+.++|+++.+ +++.+|+|+||++++||+
T Consensus 248 -----~~---~------~~--~---~~~-------~~~~l~~~~l~~~~-------------~~~~il~~vsl~i~~Ge~ 288 (490)
T PRK10938 248 -----PS---A------RH--A---LPA-------NEPRIVLNNGVVSY-------------NDRPILHNLSWQVNPGEH 288 (490)
T ss_pred -----cc---c------cc--c---cCC-------CCceEEEeceEEEE-------------CCeeEEeeceEEEcCCCE
Confidence 00 0 00 0 000 00124555555433 335699999999999999
Q ss_pred EEEEccCCCChHHHHhhhcCCCCCCeeEEEEEEcCccCCh----hcccceeeEeecCCCCCC--CCcHHHHHHHHhhh--
Q 000997 858 TALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ----ETFARISGYCEQNDIHSP--GLTVLESLLFSAWL-- 929 (1194)
Q Consensus 858 ~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~----~~~~~~~gyv~Q~~~~~~--~lTv~e~l~f~~~l-- 929 (1194)
+||+||||||||||+++|+|..+. ..+|+|.++|.+... ...++.+||++|++.+++ ..|+++++.+....
T Consensus 289 ~~i~G~NGsGKSTLl~~l~G~~~~-~~~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~~~~~~~~~~~~~~~~~~ 367 (490)
T PRK10938 289 WQIVGPNGAGKSTLLSLITGDHPQ-GYSNDLTLFGRRRGSGETIWDIKKHIGYVSSSLHLDYRVSTSVRNVILSGFFDSI 367 (490)
T ss_pred EEEECCCCCCHHHHHHHHcCCCCc-ccCCeEEEecccCCCCCCHHHHHhhceEECHHHHhhcccCCcHHHHHHhcccccc
Confidence 999999999999999999996531 147999999976421 123567999999876543 35676666543210
Q ss_pred cCCCcCcHHHHHHHHHHHHHHcCCCc-ccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHH
Q 000997 930 RLPSEIELETQRAFVEEVMELVELTS-LSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSGLDARAAAIVM 1008 (1194)
Q Consensus 930 r~~~~~~~~~~~~~v~~~l~~l~l~~-~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~ 1008 (1194)
....... ...++.++++++.+++.+ ..+..+ ..|||||||||+||++|+.+|+||+|||||+|||+.++..++
T Consensus 368 ~~~~~~~-~~~~~~~~~~l~~~~l~~~~~~~~~-----~~LSgGq~qrv~la~al~~~p~lllLDEPt~gLD~~~~~~l~ 441 (490)
T PRK10938 368 GIYQAVS-DRQQKLAQQWLDILGIDKRTADAPF-----HSLSWGQQRLALIVRALVKHPTLLILDEPLQGLDPLNRQLVR 441 (490)
T ss_pred ccccCCC-HHHHHHHHHHHHHcCCchhhccCch-----hhCCHHHHHHHHHHHHHhcCCCEEEEcCccccCCHHHHHHHH
Confidence 1111111 223456789999999986 666543 589999999999999999999999999999999999999999
Q ss_pred HHHHHHHhCC-CEEEEEecCCcHHHHH-hcCeEEEEccCcEEEEe
Q 000997 1009 RTVRNIVNTG-RTIVCTIHQPSIDIFE-SFDELLFMKRGGELIYA 1051 (1194)
Q Consensus 1009 ~~l~~l~~~g-~tvi~~~H~~~~~~~~-~~d~~~~l~~gG~~~~~ 1051 (1194)
+.|++++++| .|||++||+++ ++.+ .+|++++|++ |+++..
T Consensus 442 ~~L~~l~~~~~~tviivsHd~~-~~~~~~~d~v~~l~~-G~i~~~ 484 (490)
T PRK10938 442 RFVDVLISEGETQLLFVSHHAE-DAPACITHRLEFVPD-GDIYRY 484 (490)
T ss_pred HHHHHHHhcCCcEEEEEecchh-hhhhhhheeEEEecC-CceEEe
Confidence 9999998775 46999999986 3555 4899999985 666553
No 32
>COG4172 ABC-type uncharacterized transport system, duplicated ATPase component [General function prediction only]
Probab=100.00 E-value=3.1e-60 Score=516.75 Aligned_cols=471 Identities=22% Similarity=0.298 Sum_probs=360.6
Q ss_pred cceeeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHhcCcCC--CCceeeEEEECCccCCCCCC-------CceEEEEec
Q 000997 146 SKLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGH--HLQVSGKITYNGHGFKEFVP-------PRTSAYVSQ 216 (1194)
Q Consensus 146 ~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~--~~~~~G~i~~~G~~~~~~~~-------~~~~~yv~Q 216 (1194)
....++++|||.+++||.++|+|.||||||-..+.+.|+++. ....+|+|.|+|.++-.... ...|++++|
T Consensus 21 ~~~~aVk~isf~i~~GEtlAlVGESGSGKSvTa~sim~LLp~~~~~~~sg~i~f~G~dll~~se~~lr~iRG~~I~MIFQ 100 (534)
T COG4172 21 GTVEAVKGISFDIEAGETLALVGESGSGKSVTALSILGLLPSPAAAHPSGSILFDGEDLLAASERQLRGVRGNKIGMIFQ 100 (534)
T ss_pred cceEeeccceeeecCCCEEEEEecCCCCccHHHHHHHHhcCCCcccCccceeEEcChhhhcCCHHHHhhhcccceEEEec
Confidence 456799999999999999999999999999999999999876 33568999999998754432 247999999
Q ss_pred CCC--CCCCCCHHHHHHHhhhccCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhccCcchhHHHHHHHHHhCCccc
Q 000997 217 QDW--QVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTC 294 (1194)
Q Consensus 217 ~d~--~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~k~~~~~~~~~~~~~~~~l~~lgL~~~ 294 (1194)
+|- +.|-.|+...|.-..+++... .+...+.++-++|+..|+++-
T Consensus 101 EPMtSLNPl~tIg~Qi~E~l~~Hrg~---------------------------------~~~~Ar~r~lelL~~VgI~~p 147 (534)
T COG4172 101 EPMTSLNPLHTIGKQLAEVLRLHRGL---------------------------------SRAAARARALELLELVGIPEP 147 (534)
T ss_pred ccccccCcHhHHHHHHHHHHHHHhcc---------------------------------cHHHHHHHHHHHHHHcCCCch
Confidence 983 566678877776655544211 112234567888999999876
Q ss_pred ccccccCccCCCCChhhhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhh
Q 000997 295 ADTLVGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYEL 374 (1194)
Q Consensus 295 ~dt~vg~~~~~~LSGGqkqRvsia~al~~~~~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~ 374 (1194)
...+ +.+...|||||||||.||.||+.+|++|+-||||++||.....+|.+.|+++...+| ..++.|+|+..-+-.+
T Consensus 148 ~~rl--~~yPHeLSGGqRQRVMIAMALan~P~lLIADEPTTALDVtvQaQIL~Ll~~Lq~~~g-Ma~lfITHDL~iVr~~ 224 (534)
T COG4172 148 EKRL--DAYPHELSGGQRQRVMIAMALANEPDLLIADEPTTALDVTVQAQILDLLKELQAELG-MAILFITHDLGIVRKF 224 (534)
T ss_pred hhhh--hhCCcccCcchhhHHHHHHHHcCCCCeEeecCCcchhhhhhHHHHHHHHHHHHHHhC-cEEEEEeccHHHHHHh
Confidence 5433 457789999999999999999999999999999999999999999999999988764 5566799999999999
Q ss_pred cCeEEEEcCCeEEEecChhhHHHHHHhcCCCCCCCCChhHHHHhhcCcccccccccCCCCCCcCCChhHHHHHHHhchhc
Q 000997 375 FDDVILLSEGQIVYQGPRVSVLDFFASMGFSCPKRKNVADFLQEVTSKKDQEQYWSNPYLPYRYISPGKFAEAFHSYHTG 454 (1194)
Q Consensus 375 ~D~vilL~~G~iv~~G~~~~~~~~F~~~G~~cp~~~~~adfl~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 454 (1194)
+|+|+||.+|+++++|+.+.+.. .|.+ ||+.
T Consensus 225 ADrV~VM~~G~ivE~~~t~~lF~--------~PqH-------------------------pYTr---------------- 255 (534)
T COG4172 225 ADRVYVMQHGEIVETGTTETLFA--------APQH-------------------------PYTR---------------- 255 (534)
T ss_pred hhhEEEEeccEEeecCcHHHHhh--------CCCC-------------------------hHHH----------------
Confidence 99999999999999998766521 1111 1100
Q ss_pred cchHHhhcCCccccCCCcCcccCCCCCCcHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHcccCCCCCcc
Q 000997 455 KNLSEELAVPFDRRFNHPAALSTSKYGEKRSELLKTSFNWQLLLMKRNSFIYVFKFIQLLIVALITMTVFFRTTMHHKTI 534 (1194)
Q Consensus 455 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~R~~~~~~r~~~~~~~~~~~~~~~ali~g~vf~~~~~~~~~~ 534 (1194)
.+. +.
T Consensus 256 -~Ll---~a----------------------------------------------------------------------- 260 (534)
T COG4172 256 -KLL---AA----------------------------------------------------------------------- 260 (534)
T ss_pred -HHH---hc-----------------------------------------------------------------------
Confidence 000 00
Q ss_pred CcchhHHHHHHHHHHHHHHHHHHHHHHHHhcchhhhhhccccccchhhHHHHHHHHHhhHHHHhhhHhhheeeeeccccc
Q 000997 535 DDGGLYLGALYFSMVIILFNGFTEVSMLVAKLPVLYKHRDLHFYPSWVYTIPSWALSIPTSLIESGFWVAVTYYVIGYDP 614 (1194)
Q Consensus 535 ~~~~~~~g~lf~~l~~~~~~~~~~~~~~~~~~~v~~k~r~~~~y~~~ay~l~~~~~~iP~~~i~~~i~~~i~Y~~~gl~~ 614 (1194)
-|
T Consensus 261 ---------------------------------------------------------eP--------------------- 262 (534)
T COG4172 261 ---------------------------------------------------------EP--------------------- 262 (534)
T ss_pred ---------------------------------------------------------CC---------------------
Confidence 00
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHcccChHHHHHHHHHHHHHHHHHhhccccCCCcchhHHHHHhhcHHHHHHHHH
Q 000997 615 NVVRFSRQLLLYFFLHQMSIGLFRVIGSLGRNMIVANTFGSFAMLVVMALGGFIISRDSIPKWWIWGFWVSPLMYAQNAA 694 (1194)
Q Consensus 615 ~~~~f~~~~l~~~~~~~~~~~l~~~i~~~~~~~~va~~~~~~~~l~~~l~~Gf~i~~~~ip~~~~w~~~isp~~y~~~al 694 (1194)
T Consensus 263 -------------------------------------------------------------------------------- 262 (534)
T COG4172 263 -------------------------------------------------------------------------------- 262 (534)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHhhhcCCcccccCCCCCCchhHHHhhhcCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccceechhhhhh
Q 000997 695 SVNEFLGHSWDKKAGNSNFSLGEAILRQRSLFPESYWYWIGVGAMLGYTLLFNALFTFFLSYLNPLGKQQAVVSKKELQE 774 (1194)
Q Consensus 695 ~~nef~~~~~~~~~~~~~~~~g~~~l~~~~~~~~~~~~w~~~g~ll~~~~~f~~l~~~~l~~~~~~~~~~~~~~~~~~~~ 774 (1194)
.+
T Consensus 263 --------------~g---------------------------------------------------------------- 264 (534)
T COG4172 263 --------------SG---------------------------------------------------------------- 264 (534)
T ss_pred --------------CC----------------------------------------------------------------
Confidence 00
Q ss_pred HhhhhcCcchhHHhhhhhhcccCccCcccccCCcccccccceeEeecceeeeecccccccccccccceEEeeeeeEEEeC
Q 000997 775 RDRRRKGENVVIELREYLQRSSSLNGKYFKQKGMVLPFQPLSMAFGNINYFVDVPVELKQEGVLEDRLQLLVNVTGAFRP 854 (1194)
Q Consensus 775 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~ 854 (1194)
.. . ..+ +..++-+.-+++...++.+..+- ........++++||+++++
T Consensus 265 --------------------~~--~--p~~------~~~~~ll~~~~v~v~f~i~~g~~--~r~~~~~~AVd~isl~L~~ 312 (534)
T COG4172 265 --------------------DP--P--PLP------EDAPVLLEVEDLRVWFPIKGGFL--RRTVDHLRAVDGISLTLRR 312 (534)
T ss_pred --------------------CC--C--CCC------CCCCceEEecceEEEEecCCccc--cccchheEEeccceeEecC
Confidence 00 0 000 00011122222222221111000 0011346789999999999
Q ss_pred CcEEEEEccCCCChHHHHhhhcCCCCCCeeEEEEEEcCccCCh------hcccceeeEeecCCC--CCCCCcHHHHHHHH
Q 000997 855 GVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ------ETFARISGYCEQNDI--HSPGLTVLESLLFS 926 (1194)
Q Consensus 855 Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~------~~~~~~~gyv~Q~~~--~~~~lTv~e~l~f~ 926 (1194)
||.+||+|.||||||||=.+|.++.. .+|+|.++|.++.. ...++.+-.|+|||. +.|.+||.+-+.-+
T Consensus 313 gqTlGlVGESGSGKsTlG~allrL~~---s~G~I~F~G~~i~~~~~~~mrplR~~mQvVFQDPygSLsPRmtV~qII~EG 389 (534)
T COG4172 313 GQTLGLVGESGSGKSTLGLALLRLIP---SQGEIRFDGQDIDGLSRKEMRPLRRRMQVVFQDPYGSLSPRMTVGQIIEEG 389 (534)
T ss_pred CCeEEEEecCCCCcchHHHHHHhhcC---cCceEEECCccccccChhhhhhhhhhceEEEeCCCCCCCcccCHHHHhhhh
Confidence 99999999999999999999999876 35999999998753 235677899999985 67999999999877
Q ss_pred hhhcCCCcCcHHHHHHHHHHHHHHcCCCcccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHH
Q 000997 927 AWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSGLDARAAAI 1006 (1194)
Q Consensus 927 ~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEPTsgLD~~~~~~ 1006 (1194)
.....| ..+..++.+++.++|+.+||.+-.-.. . +.++|||||||++|||||+.+|++++||||||+||-.-+.+
T Consensus 390 L~vh~~-~ls~~eR~~rv~~aL~EVGLDp~~r~R--Y--PhEFSGGQRQRIAIARAliLkP~~i~LDEPTSALD~SVQaQ 464 (534)
T COG4172 390 LRVHEP-KLSAAERDQRVIEALEEVGLDPATRNR--Y--PHEFSGGQRQRIAIARALILKPELILLDEPTSALDRSVQAQ 464 (534)
T ss_pred hhhcCC-CCCHHHHHHHHHHHHHHcCCChhHhhc--C--CcccCcchhhHHHHHHHHhcCCcEEEecCCchHhhHHHHHH
Confidence 766654 467888999999999999997643221 2 36899999999999999999999999999999999999999
Q ss_pred HHHHHHHHHh-CCCEEEEEecCCcHHHHHhcCeEEEEccCcEEEEeCCC
Q 000997 1007 VMRTVRNIVN-TGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1194)
Q Consensus 1007 i~~~l~~l~~-~g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~ 1054 (1194)
|+++|+++.+ .|.+-++|+||.. -+-.+||+++||+ +|+|+..||.
T Consensus 465 vv~LLr~LQ~k~~LsYLFISHDL~-VvrAl~~~viVm~-~GkiVE~G~~ 511 (534)
T COG4172 465 VLDLLRDLQQKHGLSYLFISHDLA-VVRALCHRVIVMR-DGKIVEQGPT 511 (534)
T ss_pred HHHHHHHHHHHhCCeEEEEeccHH-HHHHhhceEEEEe-CCEEeeeCCH
Confidence 9999999975 5999999999976 3667799999998 5899999996
No 33
>PRK11819 putative ABC transporter ATP-binding protein; Reviewed
Probab=100.00 E-value=1.3e-58 Score=570.05 Aligned_cols=190 Identities=20% Similarity=0.261 Sum_probs=154.8
Q ss_pred cceEEeeeeeEEEeCCcEEEEEccCCCChHHHHhhhcCCCCCCeeEEEEEEcCccCChhcccceeeEeecCC-CCCCCCc
Q 000997 840 DRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQETFARISGYCEQND-IHSPGLT 918 (1194)
Q Consensus 840 ~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~~~~~~~gyv~Q~~-~~~~~lT 918 (1194)
+++.+|+|||++|++||++||+||||||||||+++|+|... +.+|+|.+++. ..+||++|+. .+++.+|
T Consensus 335 ~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~--p~~G~i~~~~~--------~~i~~v~q~~~~~~~~~t 404 (556)
T PRK11819 335 GDRLLIDDLSFSLPPGGIVGIIGPNGAGKSTLFKMITGQEQ--PDSGTIKIGET--------VKLAYVDQSRDALDPNKT 404 (556)
T ss_pred CCeeeecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCeEEEECCc--------eEEEEEeCchhhcCCCCC
Confidence 34579999999999999999999999999999999999876 46899998542 1489999986 6778899
Q ss_pred HHHHHHHHhhhcCCCcCcHHHHHHHHHHHHHHcCCCc-ccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCC
Q 000997 919 VLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTS-LSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTS 997 (1194)
Q Consensus 919 v~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~-~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEPTs 997 (1194)
|+|++.+....... ... ....+++++.+++.+ ..+.. +..|||||||||+||++|+.+|++|+|||||+
T Consensus 405 v~e~l~~~~~~~~~---~~~--~~~~~~~l~~~~l~~~~~~~~-----~~~LSgG~~qrv~la~al~~~p~lllLDEPt~ 474 (556)
T PRK11819 405 VWEEISGGLDIIKV---GNR--EIPSRAYVGRFNFKGGDQQKK-----VGVLSGGERNRLHLAKTLKQGGNVLLLDEPTN 474 (556)
T ss_pred HHHHHHhhcccccc---ccc--HHHHHHHHHhCCCChhHhcCc-----hhhCCHHHHHHHHHHHHHhcCCCEEEEcCCCC
Confidence 99999876432211 111 123456888888863 34543 35899999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCeEEEEccCcEEE-EeCC
Q 000997 998 GLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELI-YAGP 1053 (1194)
Q Consensus 998 gLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~-~~g~ 1053 (1194)
|||+.++..+++.|+++. | |||++||+++ .+...||++++|++||++. +.|+
T Consensus 475 ~LD~~~~~~l~~~l~~~~--~-tvi~vtHd~~-~~~~~~d~i~~l~~~g~~~~~~g~ 527 (556)
T PRK11819 475 DLDVETLRALEEALLEFP--G-CAVVISHDRW-FLDRIATHILAFEGDSQVEWFEGN 527 (556)
T ss_pred CCCHHHHHHHHHHHHhCC--C-eEEEEECCHH-HHHHhCCEEEEEECCCeEEEecCC
Confidence 999999999999999872 4 8999999976 4667899999998667765 4554
No 34
>PRK15064 ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.1e-58 Score=566.48 Aligned_cols=198 Identities=18% Similarity=0.261 Sum_probs=160.9
Q ss_pred eeEeecceeeeecccccccccccccceEEeeeeeEEEeCCcEEEEEccCCCChHHHHhhhcCCCCCCeeEEEEEEcCccC
Q 000997 816 SMAFGNINYFVDVPVELKQEGVLEDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPK 895 (1194)
Q Consensus 816 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 895 (1194)
.+.++|+++.+ +++.+|+|+||+|++||+++|+||||||||||+++|+|... +.+|+|.++|.
T Consensus 319 ~l~~~~l~~~~-------------~~~~~l~~is~~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~--p~~G~i~~~~~-- 381 (530)
T PRK15064 319 ALEVENLTKGF-------------DNGPLFKNLNLLLEAGERLAIIGENGVGKTTLLRTLVGELE--PDSGTVKWSEN-- 381 (530)
T ss_pred eEEEEeeEEee-------------CCceeecCcEEEECCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCeEEEECCc--
Confidence 35666666543 33569999999999999999999999999999999999876 45899999873
Q ss_pred ChhcccceeeEeecCCC--CCCCCcHHHHHHHHhhhcCCCcCcHHHHHHHHHHHHHHcCCC-cccCCcccCCCCCCCCHH
Q 000997 896 RQETFARISGYCEQNDI--HSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELT-SLSGALIGLPGINGLSTE 972 (1194)
Q Consensus 896 ~~~~~~~~~gyv~Q~~~--~~~~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~-~~~~~~~~~~~~~~LSgG 972 (1194)
+.+||++|++. +.+.+|++|++.+.. ... ..++.++++++.+++. +..+.. +..||||
T Consensus 382 ------~~i~~~~q~~~~~~~~~~t~~~~~~~~~---~~~-----~~~~~~~~~l~~~~l~~~~~~~~-----~~~LSgG 442 (530)
T PRK15064 382 ------ANIGYYAQDHAYDFENDLTLFDWMSQWR---QEG-----DDEQAVRGTLGRLLFSQDDIKKS-----VKVLSGG 442 (530)
T ss_pred ------eEEEEEcccccccCCCCCcHHHHHHHhc---cCC-----ccHHHHHHHHHHcCCChhHhcCc-----ccccCHH
Confidence 45899999864 456799999986421 111 1124577889999984 455544 3589999
Q ss_pred HHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCeEEEEccCcEEE-Ee
Q 000997 973 QRKRLTIAVELVANPSIVFMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELI-YA 1051 (1194)
Q Consensus 973 qrqrl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~-~~ 1051 (1194)
|||||+||++|+.+|+||+|||||+|||+.+...+++.|+++ +.|||++|||++ .+...||++++|.+ |+++ +.
T Consensus 443 q~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~---~~tvi~vsHd~~-~~~~~~d~i~~l~~-g~i~~~~ 517 (530)
T PRK15064 443 EKGRMLFGKLMMQKPNVLVMDEPTNHMDMESIESLNMALEKY---EGTLIFVSHDRE-FVSSLATRIIEITP-DGVVDFS 517 (530)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCCCCCCCHHHHHHHHHHHHHC---CCEEEEEeCCHH-HHHHhCCEEEEEEC-CeEEEcC
Confidence 999999999999999999999999999999999999999886 459999999986 46678999999985 5666 77
Q ss_pred CCC
Q 000997 1052 GPL 1054 (1194)
Q Consensus 1052 g~~ 1054 (1194)
|+.
T Consensus 518 g~~ 520 (530)
T PRK15064 518 GTY 520 (530)
T ss_pred CCH
Confidence 764
No 35
>TIGR03719 ABC_ABC_ChvD ATP-binding cassette protein, ChvD family. Members of this protein family have two copies of the ABC transporter ATP-binding cassette, but are found outside the common ABC transporter operon structure that features integral membrane permease proteins and substrate-binding proteins encoded next to the ATP-binding cassette (ABC domain) protein. The member protein ChvD from Agrobacterium tumefaciens was identified as both a candidate to interact with VirB8, based on yeast two-hybrid analysis, and as an apparent regulator of VirG. The general function of this protein family is unknown.
Probab=100.00 E-value=9.2e-58 Score=562.55 Aligned_cols=189 Identities=19% Similarity=0.259 Sum_probs=154.1
Q ss_pred ceEEeeeeeEEEeCCcEEEEEccCCCChHHHHhhhcCCCCCCeeEEEEEEcCccCChhcccceeeEeecCC-CCCCCCcH
Q 000997 841 RLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQETFARISGYCEQND-IHSPGLTV 919 (1194)
Q Consensus 841 ~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~~~~~~~gyv~Q~~-~~~~~lTv 919 (1194)
++.+|+|||++|++|+++||+||||||||||+++|+|... +.+|+|.+++. ..+||++|+. .+++.+||
T Consensus 334 ~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~l~G~~~--p~~G~i~~~~~--------~~i~~v~q~~~~~~~~~tv 403 (552)
T TIGR03719 334 DKLLIDDLSFKLPPGGIVGVIGPNGAGKSTLFRMITGQEQ--PDSGTIKIGET--------VKLAYVDQSRDALDPNKTV 403 (552)
T ss_pred CeeeeccceEEEcCCCEEEEECCCCCCHHHHHHHHcCCCC--CCCeEEEECCc--------eEEEEEeCCccccCCCCcH
Confidence 4579999999999999999999999999999999999876 46899998542 1589999986 47788999
Q ss_pred HHHHHHHhhhcCCCcCcHHHHHHHHHHHHHHcCCCc-ccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCC
Q 000997 920 LESLLFSAWLRLPSEIELETQRAFVEEVMELVELTS-LSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSG 998 (1194)
Q Consensus 920 ~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~-~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEPTsg 998 (1194)
+|++.+...... .... ...+.++++.+++.+ ..+.. +..|||||||||+||++|+.+|++|||||||+|
T Consensus 404 ~e~l~~~~~~~~---~~~~--~~~~~~~l~~~~l~~~~~~~~-----~~~LSgGe~qrv~la~al~~~p~lllLDEPt~~ 473 (552)
T TIGR03719 404 WEEISGGLDIIQ---LGKR--EVPSRAYVGRFNFKGSDQQKK-----VGQLSGGERNRVHLAKTLKSGGNVLLLDEPTND 473 (552)
T ss_pred HHHHHhhccccc---cCcc--hHHHHHHHHhCCCChhHhcCc-----hhhCCHHHHHHHHHHHHHhhCCCEEEEeCCCCC
Confidence 999988643211 1111 123457888888864 34543 357999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCeEEEEccCcEEE-EeCC
Q 000997 999 LDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELI-YAGP 1053 (1194)
Q Consensus 999 LD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~-~~g~ 1053 (1194)
||+.+...+++.|+++. .|||++|||++ .+...||++++|++||+++ +.|+
T Consensus 474 LD~~~~~~l~~~l~~~~---~~viivsHd~~-~~~~~~d~i~~l~~~~~~~~~~g~ 525 (552)
T TIGR03719 474 LDVETLRALEEALLEFA---GCAVVISHDRW-FLDRIATHILAFEGDSHVEWFEGN 525 (552)
T ss_pred CCHHHHHHHHHHHHHCC---CeEEEEeCCHH-HHHHhCCEEEEEECCCeEEEeCCC
Confidence 99999999999999872 48999999976 4667899999998666766 5454
No 36
>PRK10636 putative ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.2e-56 Score=553.24 Aligned_cols=186 Identities=22% Similarity=0.351 Sum_probs=151.7
Q ss_pred cceEEeeeeeEEEeCCcEEEEEccCCCChHHHHhhhcCCCCCCeeEEEEEEcCccCChhcccceeeEeecCC--CCCCCC
Q 000997 840 DRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQETFARISGYCEQND--IHSPGL 917 (1194)
Q Consensus 840 ~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~~~~~~~gyv~Q~~--~~~~~l 917 (1194)
+++.+|+|+||.|++|+++||+|||||||||||++|+|... +.+|+|.+++. ..+||++|+. .+.+..
T Consensus 323 ~~~~il~~isl~i~~Ge~~~l~G~NGsGKSTLlk~l~G~~~--p~~G~i~~~~~--------~~igy~~Q~~~~~l~~~~ 392 (638)
T PRK10636 323 GDRIILDSIKLNLVPGSRIGLLGRNGAGKSTLIKLLAGELA--PVSGEIGLAKG--------IKLGYFAQHQLEFLRADE 392 (638)
T ss_pred CCeeeeccceEEECCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCCeEEECCC--------EEEEEecCcchhhCCccc
Confidence 34679999999999999999999999999999999999876 46899998742 2589999974 345667
Q ss_pred cHHHHHHHHhhhcCCCcCcHHHHHHHHHHHHHHcCCCc-ccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCC
Q 000997 918 TVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTS-LSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPT 996 (1194)
Q Consensus 918 Tv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~-~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEPT 996 (1194)
|+.+++.- .. + ......+.++++.+++.. ..+..+ ..|||||||||+||++|+.+|+||||||||
T Consensus 393 ~~~~~~~~---~~-~-----~~~~~~~~~~L~~~~l~~~~~~~~~-----~~LSgGekqRl~La~~l~~~p~lLlLDEPt 458 (638)
T PRK10636 393 SPLQHLAR---LA-P-----QELEQKLRDYLGGFGFQGDKVTEET-----RRFSGGEKARLVLALIVWQRPNLLLLDEPT 458 (638)
T ss_pred hHHHHHHH---hC-c-----hhhHHHHHHHHHHcCCChhHhcCch-----hhCCHHHHHHHHHHHHHhcCCCEEEEcCCC
Confidence 88777531 11 1 112345778899998853 445443 579999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCeEEEEccCcEEE-EeCCC
Q 000997 997 SGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELI-YAGPL 1054 (1194)
Q Consensus 997 sgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~-~~g~~ 1054 (1194)
+|||+.+...+.+.|+++ . .|||++|||+. .+...||++++|.+ |+++ |.|+.
T Consensus 459 ~~LD~~~~~~l~~~L~~~--~-gtvi~vSHd~~-~~~~~~d~i~~l~~-G~i~~~~g~~ 512 (638)
T PRK10636 459 NHLDLDMRQALTEALIDF--E-GALVVVSHDRH-LLRSTTDDLYLVHD-GKVEPFDGDL 512 (638)
T ss_pred CCCCHHHHHHHHHHHHHc--C-CeEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEcCCCH
Confidence 999999999999999987 3 49999999976 46678999999985 6776 78875
No 37
>PRK13409 putative ATPase RIL; Provisional
Probab=100.00 E-value=1.2e-56 Score=549.63 Aligned_cols=197 Identities=23% Similarity=0.243 Sum_probs=162.3
Q ss_pred EeeeeeEEEeCCcEEEEEccCCCChHHHHhhhcCCCCCCeeEEEEEEcCccCChhcccceeeEeecCCCCCCCCcHHHHH
Q 000997 844 LLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQETFARISGYCEQNDIHSPGLTVLESL 923 (1194)
Q Consensus 844 iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~~~~~~~gyv~Q~~~~~~~lTv~e~l 923 (1194)
.|+++|+++++||++||+||||||||||+++|+|..+ +.+|+|.++ ..+||++|+..+.+.+||+|++
T Consensus 354 ~l~~~s~~i~~Geiv~l~G~NGsGKSTLlk~L~Gl~~--p~~G~I~~~----------~~i~y~~Q~~~~~~~~tv~e~l 421 (590)
T PRK13409 354 SLEVEGGEIYEGEVIGIVGPNGIGKTTFAKLLAGVLK--PDEGEVDPE----------LKISYKPQYIKPDYDGTVEDLL 421 (590)
T ss_pred EEEecceEECCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEEe----------eeEEEecccccCCCCCcHHHHH
Confidence 4899999999999999999999999999999999876 468999886 1489999998888899999999
Q ss_pred HHHhhhcCCCcCcHHHHHHHHHHHHHHcCCCcccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHH
Q 000997 924 LFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSGLDARA 1003 (1194)
Q Consensus 924 ~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEPTsgLD~~~ 1003 (1194)
.+.... ... ...++++++.+++.+..+..+ ..|||||||||+||++|+.+|+||+|||||+|||+.+
T Consensus 422 ~~~~~~-----~~~---~~~~~~~L~~l~l~~~~~~~~-----~~LSGGe~QRvaiAraL~~~p~llLLDEPt~~LD~~~ 488 (590)
T PRK13409 422 RSITDD-----LGS---SYYKSEIIKPLQLERLLDKNV-----KDLSGGELQRVAIAACLSRDADLYLLDEPSAHLDVEQ 488 (590)
T ss_pred HHHhhh-----cCh---HHHHHHHHHHCCCHHHHhCCc-----ccCCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHH
Confidence 875211 111 124678999999987776653 5899999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCeEEEEccCcEEEEeCCCCCc---hhHHHHHHHhc
Q 000997 1004 AAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLGSK---SCELIKYFEAV 1068 (1194)
Q Consensus 1004 ~~~i~~~l~~l~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~~~~---~~~~~~~f~~~ 1068 (1194)
+..+++.|++++++ |.|||+++||+. .+...+|++++|+ | ++...|..... ...+-.|++.+
T Consensus 489 ~~~l~~~l~~l~~~~g~tviivsHD~~-~~~~~aDrvivl~-~-~~~~~g~~~~~~~~~~~~~~~l~~~ 554 (590)
T PRK13409 489 RLAVAKAIRRIAEEREATALVVDHDIY-MIDYISDRLMVFE-G-EPGKHGHASGPMDMREGMNRFLKEL 554 (590)
T ss_pred HHHHHHHHHHHHHhCCCEEEEEeCCHH-HHHHhCCEEEEEc-C-cceeeeecCCchhHHHHHHHHHHHc
Confidence 99999999999764 899999999976 4667899999996 4 67666654322 12234566666
No 38
>PRK11147 ABC transporter ATPase component; Reviewed
Probab=100.00 E-value=1.4e-55 Score=550.29 Aligned_cols=191 Identities=22% Similarity=0.292 Sum_probs=153.9
Q ss_pred cceEEeeeeeEEEeCCcEEEEEccCCCChHHHHhhhcCCCCCCeeEEEEEEcCccCChhcccceeeEeecCC-CCCCCCc
Q 000997 840 DRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQETFARISGYCEQND-IHSPGLT 918 (1194)
Q Consensus 840 ~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~~~~~~~gyv~Q~~-~~~~~lT 918 (1194)
+++.+|+|+||+|++|+++||+|||||||||||++|+|... +.+|+|.+ |.+. .+||++|+. .+++.+|
T Consensus 330 ~~~~il~~vsl~i~~Ge~~~l~G~NGsGKSTLlk~l~G~~~--p~~G~i~~-~~~~-------~i~y~~q~~~~l~~~~t 399 (635)
T PRK11147 330 DGKQLVKDFSAQVQRGDKIALIGPNGCGKTTLLKLMLGQLQ--ADSGRIHC-GTKL-------EVAYFDQHRAELDPEKT 399 (635)
T ss_pred CCeEEEcCcEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCC--CCCcEEEE-CCCc-------EEEEEeCcccccCCCCC
Confidence 34579999999999999999999999999999999999865 46899988 5321 489999975 5788999
Q ss_pred HHHHHHHHhhhcCCCcCcHHHHHHHHHHHHHHcCCC-cccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCC
Q 000997 919 VLESLLFSAWLRLPSEIELETQRAFVEEVMELVELT-SLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTS 997 (1194)
Q Consensus 919 v~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~-~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEPTs 997 (1194)
|.|++.+..... ... .....+.++++.+++. +..+..+ ..|||||||||+||++|+.+|++|||||||+
T Consensus 400 v~e~l~~~~~~~---~~~--~~~~~~~~~l~~~~l~~~~~~~~~-----~~LSgGekqRl~la~al~~~p~lLlLDEPt~ 469 (635)
T PRK11147 400 VMDNLAEGKQEV---MVN--GRPRHVLGYLQDFLFHPKRAMTPV-----KALSGGERNRLLLARLFLKPSNLLILDEPTN 469 (635)
T ss_pred HHHHHHhhcccc---ccc--chHHHHHHHHHhcCCCHHHHhChh-----hhCCHHHHHHHHHHHHHhcCCCEEEEcCCCC
Confidence 999998753211 001 1123467788888875 3444443 5799999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCeEEEEc-cCcEEEEeCCC
Q 000997 998 GLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMK-RGGELIYAGPL 1054 (1194)
Q Consensus 998 gLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~~d~~~~l~-~gG~~~~~g~~ 1054 (1194)
|||+.+...+.+.|+++ +.|||++|||+. .+...||++++|. +|..+.|.|+.
T Consensus 470 ~LD~~~~~~l~~~l~~~---~~tvi~vSHd~~-~~~~~~d~i~~l~~~g~i~~~~g~y 523 (635)
T PRK11147 470 DLDVETLELLEELLDSY---QGTVLLVSHDRQ-FVDNTVTECWIFEGNGKIGRYVGGY 523 (635)
T ss_pred CCCHHHHHHHHHHHHhC---CCeEEEEECCHH-HHHHhcCEEEEEeCCCeEEEccCCH
Confidence 99999999999999875 459999999976 4667899999997 55545666654
No 39
>PLN03211 ABC transporter G-25; Provisional
Probab=100.00 E-value=1.4e-56 Score=555.67 Aligned_cols=368 Identities=29% Similarity=0.484 Sum_probs=291.7
Q ss_pred ccceeEeecceeeeeccc----------------ccccccccccceEEeeeeeEEEeCCcEEEEEccCCCChHHHHhhhc
Q 000997 813 QPLSMAFGNINYFVDVPV----------------ELKQEGVLEDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLA 876 (1194)
Q Consensus 813 ~~~~~~~~~~~~~~~~~~----------------~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~ 876 (1194)
.++++.|.++.|.++... ..++..+.++++.+|+|||++++|||++||+|||||||||||++|+
T Consensus 36 ~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~iL~~vs~~i~~Ge~~aI~GpnGaGKSTLL~iLa 115 (659)
T PLN03211 36 YPITLKFMDVCYRVKFENMKNKGSNIKRILGHKPKISDETRQIQERTILNGVTGMASPGEILAVLGPSGSGKSTLLNALA 115 (659)
T ss_pred CceEEEEEeEEEEEccCCCcccccccccccccccccccccccCCCCeeeeCCEEEEECCEEEEEECCCCCCHHHHHHHHh
Confidence 367889999999886432 1122233455678999999999999999999999999999999999
Q ss_pred CCCCCCeeEEEEEEcCccCChhcccceeeEeecCCCCCCCCcHHHHHHHHhhhcCCCcCcHHHHHHHHHHHHHHcCCCcc
Q 000997 877 GRKTGGIIEGDIYISGYPKRQETFARISGYCEQNDIHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSL 956 (1194)
Q Consensus 877 g~~~~~~~~G~i~i~g~~~~~~~~~~~~gyv~Q~~~~~~~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~ 956 (1194)
|+.+++..+|+|.+||.+.... .++.+|||+|++.+++.+||+|++.|++.++.+.....+++.+.++++++.+||.++
T Consensus 116 G~~~~~~~sG~I~inG~~~~~~-~~~~i~yv~Q~~~l~~~lTV~E~l~~~a~~~~~~~~~~~~~~~~v~~~l~~lgL~~~ 194 (659)
T PLN03211 116 GRIQGNNFTGTILANNRKPTKQ-ILKRTGFVTQDDILYPHLTVRETLVFCSLLRLPKSLTKQEKILVAESVISELGLTKC 194 (659)
T ss_pred CCCCCCceeEEEEECCEECchh-hccceEEECcccccCCcCCHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHcCChhh
Confidence 9876444689999999986533 345689999999999999999999999887766555556666789999999999999
Q ss_pred cCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhc
Q 000997 957 SGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESF 1036 (1194)
Q Consensus 957 ~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~~ 1036 (1194)
+|+.+|....++|||||||||+||++|+.+|+||||||||+|||+.++..+++.|++++++|+|||+++|||+.++++.|
T Consensus 195 ~~t~vg~~~~~~LSgGerqRv~ia~aL~~~P~iLlLDEPtsgLD~~~~~~l~~~L~~l~~~g~TvI~~sH~~~~~i~~~~ 274 (659)
T PLN03211 195 ENTIIGNSFIRGISGGERKRVSIAHEMLINPSLLILDEPTSGLDATAAYRLVLTLGSLAQKGKTIVTSMHQPSSRVYQMF 274 (659)
T ss_pred cCceeCCCCCCCcChhhhhHHHHHHHHHhCCCEEEEeCCCCCcCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhh
Confidence 99998877778999999999999999999999999999999999999999999999998889999999999987788999
Q ss_pred CeEEEEccCcEEEEeCCCCCchhHHHHHHHhcCCCCCCCCCCCccccchhccCcccccc-----cc----CcHHHHHhhc
Q 000997 1037 DELLFMKRGGELIYAGPLGSKSCELIKYFEAVEGVPKIRPGYNPAAWMLEVTSPVEESR-----LG----VDFAEIYRRS 1107 (1194)
Q Consensus 1037 d~~~~l~~gG~~~~~g~~~~~~~~~~~~f~~~~g~~~~~~~~npa~~~l~~~~~~~~~~-----~~----~~~~~~~~~s 1107 (1194)
|++++|+ +|+++|.|+. +++++||+++ | .+||+++|||||++|+++...... .. ....+.|++.
T Consensus 275 D~iilL~-~G~iv~~G~~----~~~~~~f~~~-G-~~~P~~~NpADf~ldv~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 347 (659)
T PLN03211 275 DSVLVLS-EGRCLFFGKG----SDAMAYFESV-G-FSPSFPMNPADFLLDLANGVCQTDGVSEREKPNVKQSLVASYNTL 347 (659)
T ss_pred ceEEEec-CCcEEEECCH----HHHHHHHHHC-C-CCCCCCCCHHHHHHHHcCccccCCCccccccchHHHHHHHHHHhh
Confidence 9999998 5799999986 5899999999 5 479999999999999987532110 00 1122344321
Q ss_pred HHHHHHHHHHHh--hCC-CCC-----CCcCCC-CCccccCCHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHH
Q 000997 1108 NLFQRNRELVES--LSK-PSP-----SSKKLN-FSTKYSQSFANQFLACLRKQNLSYWRNPQYTAVRFFYTVVISLMLGS 1178 (1194)
Q Consensus 1108 ~~~~~~~~~~~~--~~~-~~~-----~~~~~~-~~~~~~~~~~~q~~~l~~r~~~~~~R~~~~~~~r~~~~~~~~l~~g~ 1178 (1194)
. .++..+..+. ... +.. ..+... ....+.++||+|+.+|++|++++ ||++.+..+|+++++++|+++|+
T Consensus 348 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~Q~~~L~~R~~~~-~r~~~~~~~r~~~~i~~~ll~G~ 425 (659)
T PLN03211 348 L-APKVKAAIEMSHFPQANARFVGSASTKEHRSSDRISISTWFNQFSILLQRSLKE-RKHESFNTLRVFQVIAAALLAGL 425 (659)
T ss_pred c-cHHHHHHHhhhhhhcchhhhhhcccccccccCCCccCCCHHHHHHHHHHHHHHH-HhCcHHHHHHHHHHHHHHHHHHH
Confidence 1 1111111111 000 000 000000 11235679999999999999998 99999999999999999999999
Q ss_pred HhccCCCCcccccc
Q 000997 1179 ICWKFGAKRFAIKV 1192 (1194)
Q Consensus 1179 ~f~~~~~~~~~~~~ 1192 (1194)
+||+++ ..++|+
T Consensus 426 lf~~~~--~~~~~~ 437 (659)
T PLN03211 426 MWWHSD--FRDVQD 437 (659)
T ss_pred HHhcCC--HHHHHH
Confidence 999985 445554
No 40
>TIGR00955 3a01204 The Eye Pigment Precursor Transporter (EPP) Family protein.
Probab=100.00 E-value=1e-56 Score=558.07 Aligned_cols=346 Identities=34% Similarity=0.565 Sum_probs=295.5
Q ss_pred cceEEeeeeeEEEeCCcEEEEEccCCCChHHHHhhhcCCCCCC-eeEEEEEEcCccCChhcccceeeEeecCCCCCCCCc
Q 000997 840 DRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGG-IIEGDIYISGYPKRQETFARISGYCEQNDIHSPGLT 918 (1194)
Q Consensus 840 ~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~-~~~G~i~i~g~~~~~~~~~~~~gyv~Q~~~~~~~lT 918 (1194)
+++.+|+|||++++|||++||+|||||||||||++|+|+.+++ ..+|+|.+||.+.....+++.+|||+|+|.+++.+|
T Consensus 36 ~~~~iL~~vs~~i~~Ge~~aI~G~sGsGKSTLL~~L~g~~~~~~~~~G~i~~~g~~~~~~~~~~~i~yv~Q~~~~~~~lT 115 (617)
T TIGR00955 36 PRKHLLKNVSGVAKPGELLAVMGSSGAGKTTLMNALAFRSPKGVKGSGSVLLNGMPIDAKEMRAISAYVQQDDLFIPTLT 115 (617)
T ss_pred CccccccCCEEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCCCCcceeEEEECCEECCHHHHhhhceeeccccccCccCc
Confidence 3567999999999999999999999999999999999987543 358999999998876667888999999999999999
Q ss_pred HHHHHHHHhhhcCCCcCcHHHHHHHHHHHHHHcCCCcccCCcccCCC-CCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCC
Q 000997 919 VLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPG-INGLSTEQRKRLTIAVELVANPSIVFMDEPTS 997 (1194)
Q Consensus 919 v~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~-~~~LSgGqrqrl~ia~aL~~~p~illLDEPTs 997 (1194)
|+||+.|++.++.+.....+++++.++++++.++|.+++|+.+|.++ .++|||||||||+||+||+.+|+||||||||+
T Consensus 116 V~e~l~f~~~~~~~~~~~~~~~~~~v~~~l~~lgL~~~~~t~vg~~~~~~~LSgGqrkRvsia~aL~~~p~vlllDEPts 195 (617)
T TIGR00955 116 VREHLMFQAHLRMPRRVTKKEKRERVDEVLQALGLRKCANTRIGVPGRVKGLSGGERKRLAFASELLTDPPLLFCDEPTS 195 (617)
T ss_pred HHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCchhcCcCccCCCCCCCCcCcchhhHHHHHHHHHcCCCEEEeeCCCc
Confidence 99999999999888767777778889999999999999999998653 56899999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCeEEEEccCcEEEEeCCCCCchhHHHHHHHhcCCCCCCCCC
Q 000997 998 GLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLGSKSCELIKYFEAVEGVPKIRPG 1077 (1194)
Q Consensus 998 gLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~~~~~~~~~~~f~~~~g~~~~~~~ 1077 (1194)
|||+.++..+++.|++++++|+|||+++|||+.++++.||++++|+ +|+++|.||. +++.+||+++ | .+||++
T Consensus 196 gLD~~~~~~l~~~L~~l~~~g~tvi~~~hq~~~~i~~~~D~i~ll~-~G~~v~~G~~----~~~~~~f~~~-g-~~~p~~ 268 (617)
T TIGR00955 196 GLDSFMAYSVVQVLKGLAQKGKTIICTIHQPSSELFELFDKIILMA-EGRVAYLGSP----DQAVPFFSDL-G-HPCPEN 268 (617)
T ss_pred chhHHHHHHHHHHHHHHHhCCCEEEEEeCCCCHHHHHHhceEEEee-CCeEEEECCH----HHHHHHHHHc-C-CCCCCC
Confidence 9999999999999999988899999999999888999999999998 5899999996 4789999999 5 479999
Q ss_pred CCccccchhccCcccccccc-----CcHHHHHhhcHHHHHHHHHHHhhCCCCCC---CcCCCCCccccCCHHHHHHHHHH
Q 000997 1078 YNPAAWMLEVTSPVEESRLG-----VDFAEIYRRSNLFQRNRELVESLSKPSPS---SKKLNFSTKYSQSFANQFLACLR 1149 (1194)
Q Consensus 1078 ~npa~~~l~~~~~~~~~~~~-----~~~~~~~~~s~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~q~~~l~~ 1149 (1194)
+|||||++|+++...+.+.. .++.+.|+.|+.+++..+.......+.+. ........+|..+|+.|++.|++
T Consensus 269 ~n~ad~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~l~~ 348 (617)
T TIGR00955 269 YNPADFYVQVLAVIPGSENESRERIEKICDSFAVSDIGRDMLVNTNLWSGKAGGLVKDSENMEGIGYNASWWTQFYALLK 348 (617)
T ss_pred CChHHHHHHHhhcCcccccchHHHHHHHHHHHhcchhhHHHHHHhhhhhccccccccccccccccccCCCHHHHHHHHHH
Confidence 99999999998754322111 24556677776665544433221111110 11111234678999999999999
Q ss_pred HHHHHHhcChHHHHHHHHHHHHHHHHHHHHhccCCCCcccccc
Q 000997 1150 KQNLSYWRNPQYTAVRFFYTVVISLMLGSICWKFGAKRFAIKV 1192 (1194)
Q Consensus 1150 r~~~~~~R~~~~~~~r~~~~~~~~l~~g~~f~~~~~~~~~~~~ 1192 (1194)
|+++++||||.+..+|+++++++|+++|++||+++++.+++++
T Consensus 349 R~~~~~~R~~~~~~~~~~~~i~~~li~G~~f~~~~~~~~~~~~ 391 (617)
T TIGR00955 349 RSWLSVLRDPLLLKVRLIQTMMTAILIGLIYLGQGLTQKGVQN 391 (617)
T ss_pred HHHHHHhcCHHHHHHHHHHHHHHHHHHHHhhcCCCCCHHHHHH
Confidence 9999999999999999999999999999999999999887764
No 41
>COG1129 MglA ABC-type sugar transport system, ATPase component [Carbohydrate transport and metabolism]
Probab=100.00 E-value=6.7e-55 Score=504.50 Aligned_cols=452 Identities=24% Similarity=0.366 Sum_probs=347.3
Q ss_pred ceeeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCceeeEEEECCccCCCCCC----CceEEEEecCCCCCC
Q 000997 147 KLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVP----PRTSAYVSQQDWQVA 222 (1194)
Q Consensus 147 ~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~~~----~~~~~yv~Q~d~~~~ 222 (1194)
..++|+|||+.++|||+++|+|.||||||||+|+|+|.++|+ +|+|.++|.+..-..+ ..-|+.|.|+..++|
T Consensus 20 gV~AL~~v~l~v~~GEV~aL~GeNGAGKSTLmKiLsGv~~p~---~G~I~~~G~~~~~~sp~~A~~~GI~~V~QEl~L~p 96 (500)
T COG1129 20 GVKALDGVSLTVRPGEVHALLGENGAGKSTLMKILSGVYPPD---SGEILIDGKPVAFSSPRDALAAGIATVHQELSLVP 96 (500)
T ss_pred CceeeccceeEEeCceEEEEecCCCCCHHHHHHHHhCcccCC---CceEEECCEEccCCCHHHHHhCCcEEEeechhccC
Confidence 457999999999999999999999999999999999999887 9999999998765443 256899999999999
Q ss_pred CCCHHHHHHHhhhccCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhccCcchhHHHHHHHHHhCCcccccccccCc
Q 000997 223 EMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDE 302 (1194)
Q Consensus 223 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~k~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~ 302 (1194)
+|||.|||.++....... -.+ +.......+..+|+.+|+....++.||+
T Consensus 97 ~LsVaeNifLgre~~~~~---g~i---------------------------d~~~m~~~A~~~l~~lg~~~~~~~~v~~- 145 (500)
T COG1129 97 NLSVAENIFLGREPTRRF---GLI---------------------------DRKAMRRRARELLARLGLDIDPDTLVGD- 145 (500)
T ss_pred CccHHHHhhcccccccCC---Ccc---------------------------CHHHHHHHHHHHHHHcCCCCChhhhhhh-
Confidence 999999998764432210 000 0111234577899999997557888875
Q ss_pred cCCCCChhhhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEc
Q 000997 303 MLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLS 382 (1194)
Q Consensus 303 ~~~~LSGGqkqRvsia~al~~~~~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~ 382 (1194)
||+||||-|.|||||..+++|++||||||+|+...+..+++.++++.. .+..|+.++|..+|++++||+|.||.
T Consensus 146 ----LsiaqrQ~VeIArAl~~~arllIlDEPTaaLt~~E~~~Lf~~ir~Lk~--~Gv~ii~ISHrl~Ei~~i~DritVlR 219 (500)
T COG1129 146 ----LSIAQRQMVEIARALSFDARVLILDEPTAALTVKETERLFDLIRRLKA--QGVAIIYISHRLDEVFEIADRITVLR 219 (500)
T ss_pred ----CCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHh--CCCEEEEEcCcHHHHHHhcCEEEEEe
Confidence 999999999999999999999999999999999999999999999975 46778889999999999999999999
Q ss_pred CCeEEEecCh-hhHHHHHHhcCCCCCCCCChhHHHHhhcCcccccccccCCCCCCcCCChhHHHHHHHhchhccchHHhh
Q 000997 383 EGQIVYQGPR-VSVLDFFASMGFSCPKRKNVADFLQEVTSKKDQEQYWSNPYLPYRYISPGKFAEAFHSYHTGKNLSEEL 461 (1194)
Q Consensus 383 ~G~iv~~G~~-~~~~~~F~~~G~~cp~~~~~adfl~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 461 (1194)
+|+++..++. .+.- .++..+
T Consensus 220 DG~~v~~~~~~~~~~--------------------------------------------~~~lv~--------------- 240 (500)
T COG1129 220 DGRVVGTRPTAAETS--------------------------------------------EDELVR--------------- 240 (500)
T ss_pred CCEEeeecccccCCC--------------------------------------------HHHHHH---------------
Confidence 9999977652 2110 000000
Q ss_pred cCCccccCCCcCcccCCCCCCcHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHcccCCCCCccCcchhHH
Q 000997 462 AVPFDRRFNHPAALSTSKYGEKRSELLKTSFNWQLLLMKRNSFIYVFKFIQLLIVALITMTVFFRTTMHHKTIDDGGLYL 541 (1194)
Q Consensus 462 ~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~R~~~~~~r~~~~~~~~~~~~~~~ali~g~vf~~~~~~~~~~~~~~~~~ 541 (1194)
T Consensus 241 -------------------------------------------------------------------------------- 240 (500)
T COG1129 241 -------------------------------------------------------------------------------- 240 (500)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcchhhhhhccccccchhhHHHHHHHHHhhHHHHhhhHhhheeeeeccccccHHHHHH
Q 000997 542 GALYFSMVIILFNGFTEVSMLVAKLPVLYKHRDLHFYPSWVYTIPSWALSIPTSLIESGFWVAVTYYVIGYDPNVVRFSR 621 (1194)
Q Consensus 542 g~lf~~l~~~~~~~~~~~~~~~~~~~v~~k~r~~~~y~~~ay~l~~~~~~iP~~~i~~~i~~~i~Y~~~gl~~~~~~f~~ 621 (1194)
.|+|-
T Consensus 241 ------------------------------------------------------------------~MvGr--------- 245 (500)
T COG1129 241 ------------------------------------------------------------------LMVGR--------- 245 (500)
T ss_pred ------------------------------------------------------------------HhhCc---------
Confidence 00000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHcccChHHHHHHHHHHHHHHHHHhhccccCCCcchhHHHHHhhcHHHHHHHHHHHhhhcC
Q 000997 622 QLLLYFFLHQMSIGLFRVIGSLGRNMIVANTFGSFAMLVVMALGGFIISRDSIPKWWIWGFWVSPLMYAQNAASVNEFLG 701 (1194)
Q Consensus 622 ~~l~~~~~~~~~~~l~~~i~~~~~~~~va~~~~~~~~l~~~l~~Gf~i~~~~ip~~~~w~~~isp~~y~~~al~~nef~~ 701 (1194)
+
T Consensus 246 ----------------------------------------------------------------------------~--- 246 (500)
T COG1129 246 ----------------------------------------------------------------------------E--- 246 (500)
T ss_pred ----------------------------------------------------------------------------c---
Confidence 0
Q ss_pred CcccccCCCCCCchhHHHhhhcCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccceechhhhhhHhhhhcC
Q 000997 702 HSWDKKAGNSNFSLGEAILRQRSLFPESYWYWIGVGAMLGYTLLFNALFTFFLSYLNPLGKQQAVVSKKELQERDRRRKG 781 (1194)
Q Consensus 702 ~~~~~~~~~~~~~~g~~~l~~~~~~~~~~~~w~~~g~ll~~~~~f~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 781 (1194)
.. ..
T Consensus 247 --~~------------------~~-------------------------------------------------------- 250 (500)
T COG1129 247 --LE------------------DL-------------------------------------------------------- 250 (500)
T ss_pred --hh------------------hh--------------------------------------------------------
Confidence 00 00
Q ss_pred cchhHHhhhhhhcccCccCcccccCCcccccccceeEeecceeeeecccccccccccccceEEeeeeeEEEeCCcEEEEE
Q 000997 782 ENVVIELREYLQRSSSLNGKYFKQKGMVLPFQPLSMAFGNINYFVDVPVELKQEGVLEDRLQLLVNVTGAFRPGVLTALV 861 (1194)
Q Consensus 782 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~ 861 (1194)
.+. . ... ...+..++.++++. ...++||||++++||++||-
T Consensus 251 ------~~~-~-~~~--------------~~~~~~l~v~~l~~-----------------~~~~~dvSf~vr~GEIlGia 291 (500)
T COG1129 251 ------FPE-P-PEE--------------GIGEPVLEVRNLSG-----------------GGKVRDVSFTVRAGEILGIA 291 (500)
T ss_pred ------ccc-c-ccc--------------CCCCcEEEEecCCC-----------------CCceeCceeEEeCCcEEEEe
Confidence 000 0 000 00011222233221 11466999999999999999
Q ss_pred ccCCCChHHHHhhhcCCCCCCeeEEEEEEcCccCCh----hcccceeeEeecC---CCCCCCCcHHHHHHHHhhhcCCC-
Q 000997 862 GVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ----ETFARISGYCEQN---DIHSPGLTVLESLLFSAWLRLPS- 933 (1194)
Q Consensus 862 G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~----~~~~~~~gyv~Q~---~~~~~~lTv~e~l~f~~~lr~~~- 933 (1194)
|-=|||+|-|+++|.|..+ ..+|+|.+||+++.. ...+..++|||.| +-+++.+++.+|+.++...+...
T Consensus 292 GLvGaGRTEl~~~lfG~~~--~~~G~i~l~G~~v~~~sp~~Ai~~Gi~~v~EDRk~~Gl~l~~sI~~Ni~l~~l~~~~~~ 369 (500)
T COG1129 292 GLVGAGRTELARALFGARP--ASSGEILLDGKPVRIRSPRDAIKAGIAYVPEDRKSEGLVLDMSIAENITLASLRRFSRR 369 (500)
T ss_pred ccccCCHHHHHHHHhCCCc--CCCceEEECCEEccCCCHHHHHHcCCEeCCcccccCcCcCCCcHHHheehHhhhhhccc
Confidence 9999999999999999655 458999999998643 2455679999987 56788999999998873322211
Q ss_pred -cCcHHHHHHHHHHHHHHcCCCcccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHH
Q 000997 934 -EIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSGLDARAAAIVMRTVR 1012 (1194)
Q Consensus 934 -~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~ 1012 (1194)
-+......+.+++..+.+++.--.-. ..+..||||.+|||.|||.|..+|+||+|||||.|+|.-+...|.++|+
T Consensus 370 ~~i~~~~e~~~~~~~~~~l~Ik~~s~~----~~v~~LSGGNQQKVvlarwL~~~p~vLilDEPTRGIDVGAK~eIy~li~ 445 (500)
T COG1129 370 GLIDRRKERALAERYIRRLRIKTPSPE----QPIGTLSGGNQQKVVLARWLATDPKVLILDEPTRGIDVGAKAEIYRLIR 445 (500)
T ss_pred cccChHHHHHHHHHHHHhcCcccCCcc----chhhcCCchhhhhHHHHHHHhcCCCEEEECCCCcCcccchHHHHHHHHH
Confidence 24455556678888888887532211 1246899999999999999999999999999999999999999999999
Q ss_pred HHHhCCCEEEEEecCCcHHHHHhcCeEEEEccCcEEEEeCCC
Q 000997 1013 NIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1194)
Q Consensus 1013 ~l~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~ 1054 (1194)
+++++|.+||+++-+.. ++...||||+||. +|+++-.=+.
T Consensus 446 ~lA~~G~ail~iSSElp-Ell~~~DRIlVm~-~Gri~~e~~~ 485 (500)
T COG1129 446 ELAAEGKAILMISSELP-ELLGLSDRILVMR-EGRIVGELDR 485 (500)
T ss_pred HHHHCCCEEEEEeCChH-HHHhhCCEEEEEE-CCEEEEEecc
Confidence 99999999999999986 7889999999998 5788764443
No 42
>PLN03073 ABC transporter F family; Provisional
Probab=100.00 E-value=3e-52 Score=519.17 Aligned_cols=200 Identities=21% Similarity=0.310 Sum_probs=154.5
Q ss_pred eeEeecceeeeecccccccccccccceEEeeeeeEEEeCCcEEEEEccCCCChHHHHhhhcCCCCCCeeEEEEEEcCccC
Q 000997 816 SMAFGNINYFVDVPVELKQEGVLEDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPK 895 (1194)
Q Consensus 816 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 895 (1194)
.+.++|+++.++ +++.+|+|+||+|++|+++||+|||||||||||++|+|... +.+|+|.+++.
T Consensus 508 ~L~~~~ls~~y~------------~~~~il~~vsl~i~~Ge~i~LvG~NGsGKSTLLk~L~Gll~--p~~G~I~~~~~-- 571 (718)
T PLN03073 508 IISFSDASFGYP------------GGPLLFKNLNFGIDLDSRIAMVGPNGIGKSTILKLISGELQ--PSSGTVFRSAK-- 571 (718)
T ss_pred eEEEEeeEEEeC------------CCCeeEeccEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCC--CCCceEEECCc--
Confidence 356667665441 23469999999999999999999999999999999999876 46899998752
Q ss_pred ChhcccceeeEeecCCCCCCCCcHHHHHHHHhhhcCCCcCcHHHHHHHHHHHHHHcCCCc-ccCCcccCCCCCCCCHHHH
Q 000997 896 RQETFARISGYCEQNDIHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTS-LSGALIGLPGINGLSTEQR 974 (1194)
Q Consensus 896 ~~~~~~~~~gyv~Q~~~~~~~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~-~~~~~~~~~~~~~LSgGqr 974 (1194)
..+||++|+.. +.+++.++..+......+. .. .+.+.++++.+++.+ ..+.. +..||||||
T Consensus 572 ------~~igyv~Q~~~--~~l~~~~~~~~~~~~~~~~-~~----~~~i~~~L~~~gl~~~~~~~~-----~~~LSgGqk 633 (718)
T PLN03073 572 ------VRMAVFSQHHV--DGLDLSSNPLLYMMRCFPG-VP----EQKLRAHLGSFGVTGNLALQP-----MYTLSGGQK 633 (718)
T ss_pred ------eeEEEEecccc--ccCCcchhHHHHHHHhcCC-CC----HHHHHHHHHHCCCChHHhcCC-----ccccCHHHH
Confidence 35899999753 4456666643321111111 11 245678899999863 44443 358999999
Q ss_pred HHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCeEEEEccCcEEE-EeCC
Q 000997 975 KRLTIAVELVANPSIVFMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELI-YAGP 1053 (1194)
Q Consensus 975 qrl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~-~~g~ 1053 (1194)
|||+||++|+.+|++|+|||||+|||+.+...+++.|++. . .|||++|||+. .+...||++++|.+ |+++ +.|+
T Consensus 634 qRvaLAraL~~~p~lLLLDEPT~~LD~~s~~~l~~~L~~~--~-gtvIivSHd~~-~i~~~~drv~~l~~-G~i~~~~g~ 708 (718)
T PLN03073 634 SRVAFAKITFKKPHILLLDEPSNHLDLDAVEALIQGLVLF--Q-GGVLMVSHDEH-LISGSVDELWVVSE-GKVTPFHGT 708 (718)
T ss_pred HHHHHHHHHhcCCCEEEEcCCCCCCCHHHHHHHHHHHHHc--C-CEEEEEECCHH-HHHHhCCEEEEEEC-CEEEEeCCC
Confidence 9999999999999999999999999999999998888764 3 49999999976 46678999999985 6777 7775
Q ss_pred C
Q 000997 1054 L 1054 (1194)
Q Consensus 1054 ~ 1054 (1194)
.
T Consensus 709 ~ 709 (718)
T PLN03073 709 F 709 (718)
T ss_pred H
Confidence 3
No 43
>COG0488 Uup ATPase components of ABC transporters with duplicated ATPase domains [General function prediction only]
Probab=100.00 E-value=4.7e-52 Score=495.05 Aligned_cols=219 Identities=26% Similarity=0.295 Sum_probs=171.7
Q ss_pred ceeeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCceeeEEEECCccCCCCCCCceEEEEecCCCCCCCCCH
Q 000997 147 KLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVPPRTSAYVSQQDWQVAEMTV 226 (1194)
Q Consensus 147 ~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lTV 226 (1194)
.+++|+|+|+.+.+|+.++|+|+|||||||||++|+|.+.++ +|+|...+ .-.++|++|++...+..||
T Consensus 15 ~~~l~~~~~l~~~~G~riGLvG~NGaGKSTLLkilaG~~~~~---~G~i~~~~--------~~~v~~l~Q~~~~~~~~tv 83 (530)
T COG0488 15 DRPLLENVSLTLNPGERIGLVGRNGAGKSTLLKILAGELEPD---SGEVTRPK--------GLRVGYLSQEPPLDPEKTV 83 (530)
T ss_pred CceeecCCcceeCCCCEEEEECCCCCCHHHHHHHHcCCCcCC---CCeEeecC--------CceEEEeCCCCCcCCCccH
Confidence 357999999999999999999999999999999999999876 99998764 2369999999998989999
Q ss_pred HHHHHHhhhccCCCCchhhhHHHHHHHHHhCCCCCc---hHHHHH-HHhhccCcchhHHHHHHHHHhCCcccccccccCc
Q 000997 227 RETLDFAGQCQGVGSKYDMITELARREKIAGIKPDE---DLDIFM-KSFALGGQKTSLVVEYIMKILGLDTCADTLVGDE 302 (1194)
Q Consensus 227 ~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~---d~~~~~-k~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~ 302 (1194)
.+.+.-+.. ..++...+..... ...++. ..+.+. .....+++..+.+++.+|..||++.. ++.++
T Consensus 84 ~~~v~~~~~-----~~~~~~~~~~~~~---~~~~~~~~~~~~~l~~~~~~~~~~~~e~~~~~~L~gLg~~~~-~~~~~-- 152 (530)
T COG0488 84 LDYVIEGFG-----ELRELLAELEEAY---ALLADPDDELLAELEALLEELDGWTLEARAEEALLGLGFPDE-DRPVS-- 152 (530)
T ss_pred HHHHHhhhH-----HHHHHHHHHHHHH---HhcccchhHHHHHHHHHHHhhcccchHHHHHHHHhcCCCCcc-cCchh--
Confidence 999976532 1122221111111 001111 111111 11224567778899999999999887 77665
Q ss_pred cCCCCChhhhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEc
Q 000997 303 MLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLS 382 (1194)
Q Consensus 303 ~~~~LSGGqkqRvsia~al~~~~~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~ 382 (1194)
.||||||.||+||+||+.+|++|+|||||++||..+..++.+.|++. .+ ++|+++|+.....+.|++|+-++
T Consensus 153 ---~LSGG~r~Rv~LA~aL~~~pDlLLLDEPTNHLD~~~i~WLe~~L~~~----~g-tviiVSHDR~FLd~V~t~I~~ld 224 (530)
T COG0488 153 ---SLSGGWRRRVALARALLEEPDLLLLDEPTNHLDLESIEWLEDYLKRY----PG-TVIVVSHDRYFLDNVATHILELD 224 (530)
T ss_pred ---hcCHHHHHHHHHHHHHhcCCCEEEEcCCCcccCHHHHHHHHHHHHhC----CC-cEEEEeCCHHHHHHHhhheEEec
Confidence 59999999999999999999999999999999999999999999853 34 56668999999999999999999
Q ss_pred CCeEE-EecChhhH
Q 000997 383 EGQIV-YQGPRVSV 395 (1194)
Q Consensus 383 ~G~iv-~~G~~~~~ 395 (1194)
.|++. |.|.++..
T Consensus 225 ~g~l~~y~Gny~~~ 238 (530)
T COG0488 225 RGKLTPYKGNYSSY 238 (530)
T ss_pred CCceeEecCCHHHH
Confidence 99875 66766544
No 44
>COG3845 ABC-type uncharacterized transport systems, ATPase components [General function prediction only]
Probab=100.00 E-value=3.2e-50 Score=454.31 Aligned_cols=458 Identities=21% Similarity=0.320 Sum_probs=353.1
Q ss_pred ceeeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCceeeEEEECCccCCCCCC----CceEEEEecCCCCCC
Q 000997 147 KLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVP----PRTSAYVSQQDWQVA 222 (1194)
Q Consensus 147 ~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~~~----~~~~~yv~Q~d~~~~ 222 (1194)
...+++|||+++++||+.+|+|.||||||||+++|.|.+.|+ +|+|.++|++..-..| +.-||+|.|+..+++
T Consensus 16 ~~~And~V~l~v~~GeIHaLLGENGAGKSTLm~iL~G~~~P~---~GeI~v~G~~v~~~sP~dA~~~GIGMVhQHF~Lv~ 92 (501)
T COG3845 16 GVVANDDVSLSVKKGEIHALLGENGAGKSTLMKILFGLYQPD---SGEIRVDGKEVRIKSPRDAIRLGIGMVHQHFMLVP 92 (501)
T ss_pred CEEecCceeeeecCCcEEEEeccCCCCHHHHHHHHhCcccCC---cceEEECCEEeccCCHHHHHHcCCcEEeecccccc
Confidence 467999999999999999999999999999999999999987 9999999998765444 246899999999999
Q ss_pred CCCHHHHHHHhhhccCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhccCcchhHHHHHHHHHhCCcccccccccCc
Q 000997 223 EMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDE 302 (1194)
Q Consensus 223 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~k~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~ 302 (1194)
++||.|||..+..-.. +.+.+ ..+...+++.+.+.+||+-..|.+|++
T Consensus 93 ~lTV~ENiiLg~e~~~-~~~~~------------------------------~~~~~~~i~~l~~~yGl~vdp~~~V~d- 140 (501)
T COG3845 93 TLTVAENIILGLEPSK-GGLID------------------------------RRQARARIKELSERYGLPVDPDAKVAD- 140 (501)
T ss_pred ccchhhhhhhcCcccc-ccccC------------------------------HHHHHHHHHHHHHHhCCCCCccceeec-
Confidence 9999999988753210 00000 011234588899999999988988876
Q ss_pred cCCCCChhhhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEc
Q 000997 303 MLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLS 382 (1194)
Q Consensus 303 ~~~~LSGGqkqRvsia~al~~~~~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~ 382 (1194)
||=||||||.|-++|+.+|++|+|||||+-|-|....++++.|+++++. +.+|+.++|-..|+.+.+|++.||.
T Consensus 141 ----LsVG~qQRVEIlKaLyr~a~iLILDEPTaVLTP~E~~~lf~~l~~l~~~--G~tIi~ITHKL~Ev~~iaDrvTVLR 214 (501)
T COG3845 141 ----LSVGEQQRVEILKALYRGARLLILDEPTAVLTPQEADELFEILRRLAAE--GKTIIFITHKLKEVMAIADRVTVLR 214 (501)
T ss_pred ----CCcchhHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHC--CCEEEEEeccHHHHHHhhCeeEEEe
Confidence 9999999999999999999999999999999999999999999999863 5566679999999999999999999
Q ss_pred CCeEEEecChhhHHHHHHhcCCCCCCCCChhHHHHhhcCcccccccccCCCCCCcCCChhHHHHHHHhchhccchHHhhc
Q 000997 383 EGQIVYQGPRVSVLDFFASMGFSCPKRKNVADFLQEVTSKKDQEQYWSNPYLPYRYISPGKFAEAFHSYHTGKNLSEELA 462 (1194)
Q Consensus 383 ~G~iv~~G~~~~~~~~F~~~G~~cp~~~~~adfl~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 462 (1194)
.|+++-.-++ . ++ .+.+++++.
T Consensus 215 ~Gkvvgt~~~--~--------------~~---------------------------~t~~ela~l--------------- 236 (501)
T COG3845 215 RGKVVGTVDP--V--------------AE---------------------------TTEEELAEL--------------- 236 (501)
T ss_pred CCeEEeeecC--C--------------CC---------------------------CCHHHHHHH---------------
Confidence 9998643210 0 00 000000000
Q ss_pred CCccccCCCcCcccCCCCCCcHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHcccCCCCCccCcchhHHH
Q 000997 463 VPFDRRFNHPAALSTSKYGEKRSELLKTSFNWQLLLMKRNSFIYVFKFIQLLIVALITMTVFFRTTMHHKTIDDGGLYLG 542 (1194)
Q Consensus 463 ~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~R~~~~~~r~~~~~~~~~~~~~~~ali~g~vf~~~~~~~~~~~~~~~~~g 542 (1194)
T Consensus 237 -------------------------------------------------------------------------------- 236 (501)
T COG3845 237 -------------------------------------------------------------------------------- 236 (501)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcchhhhhhccccccchhhHHHHHHHHHhhHHHHhhhHhhheeeeeccccccHHHHHHH
Q 000997 543 ALYFSMVIILFNGFTEVSMLVAKLPVLYKHRDLHFYPSWVYTIPSWALSIPTSLIESGFWVAVTYYVIGYDPNVVRFSRQ 622 (1194)
Q Consensus 543 ~lf~~l~~~~~~~~~~~~~~~~~~~v~~k~r~~~~y~~~ay~l~~~~~~iP~~~i~~~i~~~i~Y~~~gl~~~~~~f~~~ 622 (1194)
|+|
T Consensus 237 ------------------------------------------------------------------MvG----------- 239 (501)
T COG3845 237 ------------------------------------------------------------------MVG----------- 239 (501)
T ss_pred ------------------------------------------------------------------hcC-----------
Confidence 000
Q ss_pred HHHHHHHHHHHHHHHHHHHHcccChHHHHHHHHHHHHHHHHHhhccccCCCcchhHHHHHhhcHHHHHHHHHHHhhhcCC
Q 000997 623 LLLYFFLHQMSIGLFRVIGSLGRNMIVANTFGSFAMLVVMALGGFIISRDSIPKWWIWGFWVSPLMYAQNAASVNEFLGH 702 (1194)
Q Consensus 623 ~l~~~~~~~~~~~l~~~i~~~~~~~~va~~~~~~~~l~~~l~~Gf~i~~~~ip~~~~w~~~isp~~y~~~al~~nef~~~ 702 (1194)
T Consensus 240 -------------------------------------------------------------------------------- 239 (501)
T COG3845 240 -------------------------------------------------------------------------------- 239 (501)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cccccCCCCCCchhHHHhhhcCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccceechhhhhhHhhhhcCc
Q 000997 703 SWDKKAGNSNFSLGEAILRQRSLFPESYWYWIGVGAMLGYTLLFNALFTFFLSYLNPLGKQQAVVSKKELQERDRRRKGE 782 (1194)
Q Consensus 703 ~~~~~~~~~~~~~g~~~l~~~~~~~~~~~~w~~~g~ll~~~~~f~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 782 (1194)
..+. ..
T Consensus 240 --------------~~v~-----------------------------------------------~~------------- 245 (501)
T COG3845 240 --------------REVV-----------------------------------------------LR------------- 245 (501)
T ss_pred --------------Cccc-----------------------------------------------cc-------------
Confidence 0000 00
Q ss_pred chhHHhhhhhhcccCccCcccccCCcccccccceeEeecceeeeecccccccccccccceEEeeeeeEEEeCCcEEEEEc
Q 000997 783 NVVIELREYLQRSSSLNGKYFKQKGMVLPFQPLSMAFGNINYFVDVPVELKQEGVLEDRLQLLVNVTGAFRPGVLTALVG 862 (1194)
Q Consensus 783 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G 862 (1194)
.+. .. ...| ...+..++++...+ .....+++|||++++||++||.|
T Consensus 246 -----~~~----~~-------~~pg------~~vL~V~~L~v~~~------------~~~~~v~~vs~~Vr~GEIvGIAG 291 (501)
T COG3845 246 -----VVK----PP-------STPG------EVVLEVEDLSVKDR------------RGVTAVKDVSFEVRAGEIVGIAG 291 (501)
T ss_pred -----ccc----CC-------CCCC------CeEEEEeeeEeecC------------CCCceeeeeeeEEecCcEEEEEe
Confidence 000 00 0000 12234444443221 12467889999999999999999
Q ss_pred cCCCChHHHHhhhcCCCCCCeeEEEEEEcCccC----Ch-hcccceeeEeecCC---CCCCCCcHHHHHHHHhhhcC---
Q 000997 863 VSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPK----RQ-ETFARISGYCEQND---IHSPGLTVLESLLFSAWLRL--- 931 (1194)
Q Consensus 863 ~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~----~~-~~~~~~~gyv~Q~~---~~~~~lTv~e~l~f~~~lr~--- 931 (1194)
..|-|-+.|+.+|+|..+ +.+|+|.++|.++ +. ...+..+||||.|. .+.+.+|+.||+.+...-+.
T Consensus 292 V~GNGQ~eL~eaisGlr~--~~~G~I~l~G~~v~~~~~~~~~r~~G~~~VPedR~~~Glv~~~sl~eN~vL~~~~~~~~~ 369 (501)
T COG3845 292 VAGNGQSELVEAISGLRK--PASGRILLNGKDVLGRLSPRERRRLGLAYVPEDRHGHGLVLDLSLAENLVLGRHDKKPFS 369 (501)
T ss_pred cCCCCHHHHHHHHhCCCc--cCCceEEECCEeccccCCHHHHHhcCCccCChhhccCccccCccHHHHhhhhhccccccc
Confidence 999999999999999875 3459999999985 22 23345789999985 45789999999987643221
Q ss_pred -CCcCcHHHHHHHHHHHHHHcCCCcccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHH
Q 000997 932 -PSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSGLDARAAAIVMRT 1010 (1194)
Q Consensus 932 -~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~ 1010 (1194)
..-+.....++...++++.++....... ...+.||||++||+-+||+|..+|++|+..+||-|||..+...|.+.
T Consensus 370 ~~g~l~~~~i~~~a~~li~~fdVr~~~~~----~~a~~LSGGNqQK~IlaREl~~~p~lLI~~qPTrGLDvgA~~~I~~~ 445 (501)
T COG3845 370 RGGFLDRRAIRKFARELIEEFDVRAPSPD----APARSLSGGNQQKLILARELARRPDLLIAAQPTRGLDVGAIEFIHER 445 (501)
T ss_pred cccccCHHHHHHHHHHHHHHcCccCCCCC----cchhhcCCcceehhhhhhhhccCCCEEEEcCCCccccHHHHHHHHHH
Confidence 1123455667788899999888632211 12468999999999999999999999999999999999999999999
Q ss_pred HHHHHhCCCEEEEEecCCcHHHHHhcCeEEEEccCcEEEEeCCCCC
Q 000997 1011 VRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLGS 1056 (1194)
Q Consensus 1011 l~~l~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~~~ 1056 (1194)
|.+.++.|+.|++++-+.+ ++++.+|||.||. +|+++...+..+
T Consensus 446 l~e~r~~G~AVLLiS~dLD-Eil~lsDrIaVi~-~Gri~~~~~~~~ 489 (501)
T COG3845 446 LLELRDAGKAVLLISEDLD-EILELSDRIAVIY-EGRIVGIVPPEE 489 (501)
T ss_pred HHHHHhcCCEEEEEehhHH-HHHHhhheeeeee-CCceeccccccc
Confidence 9999999999999999987 7999999999998 589988777653
No 45
>COG1126 GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=5.4e-46 Score=378.73 Aligned_cols=211 Identities=27% Similarity=0.376 Sum_probs=185.9
Q ss_pred ccccccccceEEeeeeeEEEeCCcEEEEEccCCCChHHHHhhhcCCCCCCeeEEEEEEcCccCC----hhcccceeeEee
Q 000997 833 KQEGVLEDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKR----QETFARISGYCE 908 (1194)
Q Consensus 833 ~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~----~~~~~~~~gyv~ 908 (1194)
++..+.++..++|+|||++|++||+++|+|||||||||||+||.++.. +.+|+|.++|.++. ....++.+|+|+
T Consensus 6 ~~l~K~fg~~~VLkgi~l~v~~Gevv~iiGpSGSGKSTlLRclN~LE~--~~~G~I~i~g~~~~~~~~~~~~R~~vGmVF 83 (240)
T COG1126 6 KNLSKSFGDKEVLKGISLSVEKGEVVVIIGPSGSGKSTLLRCLNGLEE--PDSGSITVDGEDVGDKKDILKLRRKVGMVF 83 (240)
T ss_pred EeeeEEeCCeEEecCcceeEcCCCEEEEECCCCCCHHHHHHHHHCCcC--CCCceEEECCEeccchhhHHHHHHhcCeec
Confidence 334445678899999999999999999999999999999999999887 56899999997553 235678899999
Q ss_pred cCCCCCCCCcHHHHHHHHhhhcCCCcCcHHHHHHHHHHHHHHcCCCcccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCC
Q 000997 909 QNDIHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPS 988 (1194)
Q Consensus 909 Q~~~~~~~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~ 988 (1194)
|+..+||++||.||+.++...- ...++++.++...+.|+.+||.+.+|.+. .+|||||||||+|||||+.+|+
T Consensus 84 Q~fnLFPHlTvleNv~lap~~v--~~~~k~eA~~~A~~lL~~VGL~~ka~~yP-----~qLSGGQqQRVAIARALaM~P~ 156 (240)
T COG1126 84 QQFNLFPHLTVLENVTLAPVKV--KKLSKAEAREKALELLEKVGLADKADAYP-----AQLSGGQQQRVAIARALAMDPK 156 (240)
T ss_pred ccccccccchHHHHHHhhhHHH--cCCCHHHHHHHHHHHHHHcCchhhhhhCc-----cccCcHHHHHHHHHHHHcCCCC
Confidence 9999999999999999875422 24456777788889999999999988763 5899999999999999999999
Q ss_pred EEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCeEEEEccCcEEEEeCCC
Q 000997 989 IVFMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1194)
Q Consensus 989 illLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~ 1054 (1194)
++++|||||+|||+....+.+.+++++++|.|.||+||++.. .-+.+||+++|+ +|+++..|++
T Consensus 157 vmLFDEPTSALDPElv~EVL~vm~~LA~eGmTMivVTHEM~F-Ar~VadrviFmd-~G~iie~g~p 220 (240)
T COG1126 157 VMLFDEPTSALDPELVGEVLDVMKDLAEEGMTMIIVTHEMGF-AREVADRVIFMD-QGKIIEEGPP 220 (240)
T ss_pred EEeecCCcccCCHHHHHHHHHHHHHHHHcCCeEEEEechhHH-HHHhhheEEEee-CCEEEEecCH
Confidence 999999999999999999999999999999999999999874 557799999998 5889988875
No 46
>KOG0927 consensus Predicted transporter (ABC superfamily) [General function prediction only]
Probab=100.00 E-value=3.4e-43 Score=397.64 Aligned_cols=203 Identities=21% Similarity=0.272 Sum_probs=156.1
Q ss_pred cceeEeecceeeeecccccccccccccceEEeeeeeEEEeCCcEEEEEccCCCChHHHHhhhcCCCCCCeeEEEEEEcCc
Q 000997 814 PLSMAFGNINYFVDVPVELKQEGVLEDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGY 893 (1194)
Q Consensus 814 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~ 893 (1194)
|..+.++|+++.++ ++..++++++|.+.+++.+|+||||||||||||+++.|... +..|.|.-.-+
T Consensus 387 ~pvi~~~nv~F~y~------------~~~~iy~~l~fgid~~srvAlVGPNG~GKsTLlKl~~gdl~--p~~G~vs~~~H 452 (614)
T KOG0927|consen 387 PPVIMVQNVSFGYS------------DNPMIYKKLNFGIDLDSRVALVGPNGAGKSTLLKLITGDLQ--PTIGMVSRHSH 452 (614)
T ss_pred CCeEEEeccccCCC------------CcchhhhhhhcccCcccceeEecCCCCchhhhHHHHhhccc--ccccccccccc
Confidence 44566777776553 22368899999999999999999999999999999999876 45777654332
Q ss_pred cCChhcccceeeEeecC--CCCCCCCcHHHHHHHHhhhcCCCcCcHHHHHHHHHHHHHHcCCCcccCCcccCCCCCCCCH
Q 000997 894 PKRQETFARISGYCEQN--DIHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLST 971 (1194)
Q Consensus 894 ~~~~~~~~~~~gyv~Q~--~~~~~~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSg 971 (1194)
. .+++-.|+ +.+.-..++.|+++=.. + ...+.+.+..++..+||....... ..++||+
T Consensus 453 ~--------~~~~y~Qh~~e~ldl~~s~le~~~~~~----~----~~~~~e~~r~ilgrfgLtgd~q~~----p~~~LS~ 512 (614)
T KOG0927|consen 453 N--------KLPRYNQHLAEQLDLDKSSLEFMMPKF----P----DEKELEEMRSILGRFGLTGDAQVV----PMSQLSD 512 (614)
T ss_pred c--------cchhhhhhhHhhcCcchhHHHHHHHhc----c----ccchHHHHHHHHHHhCCCcccccc----chhhccc
Confidence 1 22344443 23334567777764211 1 123445678899999998655432 2468999
Q ss_pred HHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCeEEEEccCcEEEEe
Q 000997 972 EQRKRLTIAVELVANPSIVFMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYA 1051 (1194)
Q Consensus 972 Gqrqrl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~ 1051 (1194)
|||+||.+|+.++..|.||+|||||+|||..+...+-+.|.+. ..+||+++||... +-+.++++.+..+++...+.
T Consensus 513 Gqr~rVlFa~l~~kqP~lLlLDEPtnhLDi~tid~laeaiNe~---~Ggvv~vSHDfrl-I~qVaeEi~~c~~~~~~~~~ 588 (614)
T KOG0927|consen 513 GQRRRVLFARLAVKQPHLLLLDEPTNHLDIETIDALAEAINEF---PGGVVLVSHDFRL-ISQVAEEIWVCENGTVTKWD 588 (614)
T ss_pred ccchhHHHHHHHhcCCcEEEecCCCcCCCchhHHHHHHHHhcc---CCceeeeechhhH-HHHHHHHhHhhccCceeecC
Confidence 9999999999999999999999999999999999999988875 5689999999864 77889999999998888998
Q ss_pred CCC
Q 000997 1052 GPL 1054 (1194)
Q Consensus 1052 g~~ 1054 (1194)
|..
T Consensus 589 G~i 591 (614)
T KOG0927|consen 589 GDI 591 (614)
T ss_pred ccH
Confidence 864
No 47
>COG1126 GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=2.7e-43 Score=359.06 Aligned_cols=221 Identities=27% Similarity=0.381 Sum_probs=187.6
Q ss_pred ceeeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCceeeEEEECCccCCCC----CCCceEEEEecCCCCCC
Q 000997 147 KLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEF----VPPRTSAYVSQQDWQVA 222 (1194)
Q Consensus 147 ~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~----~~~~~~~yv~Q~d~~~~ 222 (1194)
+..+|+|||++|++||+++|+|||||||||||++|.|+-.++ +|+|.++|.++... ..++.+|+|+|+..+||
T Consensus 14 ~~~VLkgi~l~v~~Gevv~iiGpSGSGKSTlLRclN~LE~~~---~G~I~i~g~~~~~~~~~~~~R~~vGmVFQ~fnLFP 90 (240)
T COG1126 14 DKEVLKGISLSVEKGEVVVIIGPSGSGKSTLLRCLNGLEEPD---SGSITVDGEDVGDKKDILKLRRKVGMVFQQFNLFP 90 (240)
T ss_pred CeEEecCcceeEcCCCEEEEECCCCCCHHHHHHHHHCCcCCC---CceEEECCEeccchhhHHHHHHhcCeecccccccc
Confidence 457999999999999999999999999999999999988776 99999999765322 24678999999999999
Q ss_pred CCCHHHHHHHhhhccCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhccCcchhHHHHHHHHHhCCcccccccccCc
Q 000997 223 EMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDE 302 (1194)
Q Consensus 223 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~k~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~ 302 (1194)
++||.||+..+...-. .....+.+.+..++|+.+||.+.+|..
T Consensus 91 HlTvleNv~lap~~v~---------------------------------~~~k~eA~~~A~~lL~~VGL~~ka~~y---- 133 (240)
T COG1126 91 HLTVLENVTLAPVKVK---------------------------------KLSKAEAREKALELLEKVGLADKADAY---- 133 (240)
T ss_pred cchHHHHHHhhhHHHc---------------------------------CCCHHHHHHHHHHHHHHcCchhhhhhC----
Confidence 9999999988643110 011122344577899999999988865
Q ss_pred cCCCCChhhhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEc
Q 000997 303 MLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLS 382 (1194)
Q Consensus 303 ~~~~LSGGqkqRvsia~al~~~~~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~ 382 (1194)
...|||||||||+|||||+.+|+++++|||||+|||....++.+.++++++. +.|++.++|....+.+.+|||+.|+
T Consensus 134 -P~qLSGGQqQRVAIARALaM~P~vmLFDEPTSALDPElv~EVL~vm~~LA~e--GmTMivVTHEM~FAr~VadrviFmd 210 (240)
T COG1126 134 -PAQLSGGQQQRVAIARALAMDPKVMLFDEPTSALDPELVGEVLDVMKDLAEE--GMTMIIVTHEMGFAREVADRVIFMD 210 (240)
T ss_pred -ccccCcHHHHHHHHHHHHcCCCCEEeecCCcccCCHHHHHHHHHHHHHHHHc--CCeEEEEechhHHHHHhhheEEEee
Confidence 4579999999999999999999999999999999999999999999999974 4666668899999999999999999
Q ss_pred CCeEEEecChhhHHHHHHhcCCCCCCCCChhHHHHh
Q 000997 383 EGQIVYQGPRVSVLDFFASMGFSCPKRKNVADFLQE 418 (1194)
Q Consensus 383 ~G~iv~~G~~~~~~~~F~~~G~~cp~~~~~adfl~~ 418 (1194)
+|+++..|+++++ |..|.+....+|+..
T Consensus 211 ~G~iie~g~p~~~--------f~~p~~~R~~~FL~~ 238 (240)
T COG1126 211 QGKIIEEGPPEEF--------FDNPKSERTRQFLSK 238 (240)
T ss_pred CCEEEEecCHHHH--------hcCCCCHHHHHHHHh
Confidence 9999999998876 456766666777654
No 48
>COG1127 Ttg2A ABC-type transport system involved in resistance to organic solvents, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=6.4e-43 Score=361.79 Aligned_cols=224 Identities=25% Similarity=0.357 Sum_probs=192.1
Q ss_pred cccccceEEeeeeeEEEeCCcEEEEEccCCCChHHHHhhhcCCCCCCeeEEEEEEcCccCCh------hcccceeeEeec
Q 000997 836 GVLEDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ------ETFARISGYCEQ 909 (1194)
Q Consensus 836 ~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~------~~~~~~~gyv~Q 909 (1194)
.+.++.+.||+||+++|++||+++||||||+||||||++|.|..+ +.+|+|.++|.++.+ ...++++|+++|
T Consensus 15 ~~~fG~~~Ild~v~l~V~~Gei~~iiGgSGsGKStlLr~I~Gll~--P~~GeI~i~G~~i~~ls~~~~~~ir~r~GvlFQ 92 (263)
T COG1127 15 TKSFGDRVILDGVDLDVPRGEILAILGGSGSGKSTLLRLILGLLR--PDKGEILIDGEDIPQLSEEELYEIRKRMGVLFQ 92 (263)
T ss_pred eeecCCEEEecCceeeecCCcEEEEECCCCcCHHHHHHHHhccCC--CCCCeEEEcCcchhccCHHHHHHHHhheeEEee
Confidence 334578899999999999999999999999999999999999887 568999999988632 245778999999
Q ss_pred CCCCCCCCcHHHHHHHHhhhcCCCcCcHHHHHHHHHHHHHHcCCCcc-cCCcccCCCCCCCCHHHHHHHHHHHHHhhCCC
Q 000997 910 NDIHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSL-SGALIGLPGINGLSTEQRKRLTIAVELVANPS 988 (1194)
Q Consensus 910 ~~~~~~~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~-~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~ 988 (1194)
+-.+|..+||+||+.|.. |...+.+.+..++.+..-++++||... ++.. +++||||++||++|||||+.+|+
T Consensus 93 ~gALFssltV~eNVafpl--re~~~lp~~~i~~lv~~KL~~VGL~~~~~~~~-----PsELSGGM~KRvaLARAialdPe 165 (263)
T COG1127 93 QGALFSSLTVFENVAFPL--REHTKLPESLIRELVLMKLELVGLRGAAADLY-----PSELSGGMRKRVALARAIALDPE 165 (263)
T ss_pred ccccccccchhHhhheeh--HhhccCCHHHHHHHHHHHHHhcCCChhhhhhC-----chhhcchHHHHHHHHHHHhcCCC
Confidence 999999999999999864 333456677777888888999999877 5543 46899999999999999999999
Q ss_pred EEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCeEEEEccCcEEEEeCCCCCch----hHHHH
Q 000997 989 IVFMDEPTSGLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLGSKS----CELIK 1063 (1194)
Q Consensus 989 illLDEPTsgLD~~~~~~i~~~l~~l~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~~~~~----~~~~~ 1063 (1194)
|||+||||+||||.++..+-++|+++.++ |.|+|++|||.+ .++..+|++++|.+ |+++..|++.+.. .-+.+
T Consensus 166 ll~~DEPtsGLDPI~a~~~~~LI~~L~~~lg~T~i~VTHDl~-s~~~i~Drv~~L~~-gkv~~~Gt~~el~~sd~P~v~q 243 (263)
T COG1127 166 LLFLDEPTSGLDPISAGVIDELIRELNDALGLTVIMVTHDLD-SLLTIADRVAVLAD-GKVIAEGTPEELLASDDPWVRQ 243 (263)
T ss_pred EEEecCCCCCCCcchHHHHHHHHHHHHHhhCCEEEEEECChH-HHHhhhceEEEEeC-CEEEEeCCHHHHHhCCCHHHHH
Confidence 99999999999999999999999999876 999999999987 58899999999985 8999999975321 12556
Q ss_pred HHHhcCC
Q 000997 1064 YFEAVEG 1070 (1194)
Q Consensus 1064 ~f~~~~g 1070 (1194)
||....+
T Consensus 244 f~~G~~~ 250 (263)
T COG1127 244 FFNGIRD 250 (263)
T ss_pred HhcCCCC
Confidence 7776543
No 49
>COG1135 AbcC ABC-type metal ion transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=6.9e-43 Score=373.63 Aligned_cols=203 Identities=26% Similarity=0.356 Sum_probs=183.5
Q ss_pred ceEEeeeeeEEEeCCcEEEEEccCCCChHHHHhhhcCCCCCCeeEEEEEEcCccCCh------hcccceeeEeecCCCCC
Q 000997 841 RLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ------ETFARISGYCEQNDIHS 914 (1194)
Q Consensus 841 ~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~------~~~~~~~gyv~Q~~~~~ 914 (1194)
...+|+|||++|++||++||+|+||||||||++++.++.. |.+|+|.++|.++.. +..++.+|+++|+..++
T Consensus 18 ~~~al~~vsL~I~~GeI~GIIG~SGAGKSTLiR~iN~Le~--PtsG~v~v~G~di~~l~~~~Lr~~R~~IGMIFQhFnLL 95 (339)
T COG1135 18 TVTALDDVSLEIPKGEIFGIIGYSGAGKSTLLRLINLLER--PTSGSVFVDGQDLTALSEAELRQLRQKIGMIFQHFNLL 95 (339)
T ss_pred ceeeeccceEEEcCCcEEEEEcCCCCcHHHHHHHHhccCC--CCCceEEEcCEecccCChHHHHHHHhhccEEecccccc
Confidence 4689999999999999999999999999999999999887 569999999976532 34678899999999999
Q ss_pred CCCcHHHHHHHHhhhcCCCcCcHHHHHHHHHHHHHHcCCCcccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeC
Q 000997 915 PGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDE 994 (1194)
Q Consensus 915 ~~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illLDE 994 (1194)
...||.||+.|...+.. .++++.+++|.++++.+||.+.++.+. .+|||||||||+|||||+.+|+||++||
T Consensus 96 ssrTV~~NvA~PLeiag---~~k~ei~~RV~elLelVgL~dk~~~yP-----~qLSGGQKQRVaIARALa~~P~iLL~DE 167 (339)
T COG1135 96 SSRTVFENVAFPLELAG---VPKAEIKQRVAELLELVGLSDKADRYP-----AQLSGGQKQRVAIARALANNPKILLCDE 167 (339)
T ss_pred ccchHHhhhhhhHhhcC---CCHHHHHHHHHHHHHHcCChhhhccCc-----hhcCcchhhHHHHHHHHhcCCCEEEecC
Confidence 99999999999877653 567888899999999999998888763 6899999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCeEEEEccCcEEEEeCCCC
Q 000997 995 PTSGLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLG 1055 (1194)
Q Consensus 995 PTsgLD~~~~~~i~~~l~~l~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~~ 1055 (1194)
|||+|||.+...|+++|+++.++ |.||+++||+++ -+-+.|||+.+|+ .|+++..|+..
T Consensus 168 aTSALDP~TT~sIL~LL~~In~~lglTIvlITHEm~-Vvk~ic~rVavm~-~G~lvE~G~v~ 227 (339)
T COG1135 168 ATSALDPETTQSILELLKDINRELGLTIVLITHEME-VVKRICDRVAVLD-QGRLVEEGTVS 227 (339)
T ss_pred ccccCChHHHHHHHHHHHHHHHHcCCEEEEEechHH-HHHHHhhhheEee-CCEEEEeccHH
Confidence 99999999999999999999755 999999999986 3667899999998 58999999864
No 50
>COG1131 CcmA ABC-type multidrug transport system, ATPase component [Defense mechanisms]
Probab=100.00 E-value=3.7e-42 Score=387.81 Aligned_cols=205 Identities=32% Similarity=0.464 Sum_probs=183.6
Q ss_pred ccc-ceEEeeeeeEEEeCCcEEEEEccCCCChHHHHhhhcCCCCCCeeEEEEEEcCccCCh--hcccceeeEeecCCCCC
Q 000997 838 LED-RLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ--ETFARISGYCEQNDIHS 914 (1194)
Q Consensus 838 ~~~-~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~--~~~~~~~gyv~Q~~~~~ 914 (1194)
.++ ++.+|+||||+|++|+++||+|||||||||||++|+|... +.+|+|.++|.+... ...++.+||++|++.++
T Consensus 13 ~~~~~~~~l~~vs~~i~~Gei~gllG~NGAGKTTllk~l~gl~~--p~~G~i~i~G~~~~~~~~~~~~~igy~~~~~~~~ 90 (293)
T COG1131 13 KYGGDKTALDGVSFEVEPGEIFGLLGPNGAGKTTLLKILAGLLK--PTSGEILVLGYDVVKEPAKVRRRIGYVPQEPSLY 90 (293)
T ss_pred EeCCCCEEEeceeEEEcCCeEEEEECCCCCCHHHHHHHHhCCcC--CCceEEEEcCEeCccCHHHHHhheEEEccCCCCC
Confidence 445 5889999999999999999999999999999999999887 468999999987654 45678899999999999
Q ss_pred CCCcHHHHHHHHhhhcCCCcCcHHHHHHHHHHHHHHcCCCcccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeC
Q 000997 915 PGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDE 994 (1194)
Q Consensus 915 ~~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illLDE 994 (1194)
+.+||+|+|.|.+.++.+.. ....++++++++.++|.+..+.. +++||+||||||+||+||+++|++|||||
T Consensus 91 ~~lT~~e~l~~~~~l~~~~~---~~~~~~~~~~l~~~~L~~~~~~~-----~~~lS~G~kqrl~ia~aL~~~P~lliLDE 162 (293)
T COG1131 91 PELTVRENLEFFARLYGLSK---EEAEERIEELLELFGLEDKANKK-----VRTLSGGMKQRLSIALALLHDPELLILDE 162 (293)
T ss_pred ccccHHHHHHHHHHHhCCCh---hHHHHHHHHHHHHcCCchhhCcc-----hhhcCHHHHHHHHHHHHHhcCCCEEEECC
Confidence 99999999999999886543 44556799999999999855544 36899999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHHHhCC-CEEEEEecCCcHHHHHhcCeEEEEccCcEEEEeCCC
Q 000997 995 PTSGLDARAAAIVMRTVRNIVNTG-RTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1194)
Q Consensus 995 PTsgLD~~~~~~i~~~l~~l~~~g-~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~ 1054 (1194)
||+|||+.++..+++.|++++++| +||+++||+++ ++...||++++|+ +|++++.|+.
T Consensus 163 Pt~GLDp~~~~~~~~~l~~l~~~g~~tvlissH~l~-e~~~~~d~v~il~-~G~~~~~g~~ 221 (293)
T COG1131 163 PTSGLDPESRREIWELLRELAKEGGVTILLSTHILE-EAEELCDRVIILN-DGKIIAEGTP 221 (293)
T ss_pred CCcCCCHHHHHHHHHHHHHHHhCCCcEEEEeCCcHH-HHHHhCCEEEEEe-CCEEEEeCCH
Confidence 999999999999999999999887 89999999987 6777899999998 5899999975
No 51
>COG1120 FepC ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism]
Probab=100.00 E-value=1.6e-42 Score=373.33 Aligned_cols=209 Identities=27% Similarity=0.420 Sum_probs=182.2
Q ss_pred ccceEEeeeeeEEEeCCcEEEEEccCCCChHHHHhhhcCCCCCCeeEEEEEEcCccCC---hhcccceeeEeecCCCCCC
Q 000997 839 EDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKR---QETFARISGYCEQNDIHSP 915 (1194)
Q Consensus 839 ~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~---~~~~~~~~gyv~Q~~~~~~ 915 (1194)
++++.+|+|+||++++|++++|+|||||||||||++|+|..+ +.+|+|.++|+++. .+.++|.+|||||......
T Consensus 12 y~~~~il~~ls~~i~~G~i~~iiGpNG~GKSTLLk~l~g~l~--p~~G~V~l~g~~i~~~~~kelAk~ia~vpQ~~~~~~ 89 (258)
T COG1120 12 YGGKPILDDLSFSIPKGEITGILGPNGSGKSTLLKCLAGLLK--PKSGEVLLDGKDIASLSPKELAKKLAYVPQSPSAPF 89 (258)
T ss_pred ECCeeEEecceEEecCCcEEEEECCCCCCHHHHHHHHhccCC--CCCCEEEECCCchhhcCHHHHhhhEEEeccCCCCCC
Confidence 467899999999999999999999999999999999999876 46899999999864 3567899999999998888
Q ss_pred CCcHHHHHHHHhhhcCC-CcCcHHHHHHHHHHHHHHcCCCcccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeC
Q 000997 916 GLTVLESLLFSAWLRLP-SEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDE 994 (1194)
Q Consensus 916 ~lTv~e~l~f~~~lr~~-~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illLDE 994 (1194)
.+||+|.+.++..-+.. .....++..+.++++++.+++.+++++.+ ..||||||||+.|||||+++|+||+|||
T Consensus 90 ~~tV~d~V~~GR~p~~~~~~~~~~~D~~~v~~aL~~~~~~~la~r~~-----~~LSGGerQrv~iArALaQ~~~iLLLDE 164 (258)
T COG1120 90 GLTVYELVLLGRYPHLGLFGRPSKEDEEIVEEALELLGLEHLADRPV-----DELSGGERQRVLIARALAQETPILLLDE 164 (258)
T ss_pred CcEEeehHhhcCCcccccccCCCHhHHHHHHHHHHHhCcHHHhcCcc-----cccChhHHHHHHHHHHHhcCCCEEEeCC
Confidence 99999999987432111 11123444557999999999999999875 5899999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCCcHHHHHhcCeEEEEccCcEEEEeCCCCC
Q 000997 995 PTSGLDARAAAIVMRTVRNIVN-TGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLGS 1056 (1194)
Q Consensus 995 PTsgLD~~~~~~i~~~l~~l~~-~g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~~~ 1056 (1194)
|||+||...+..++++++++++ +|.|||++.||++. ...+||++++|+ +|+++..|++.+
T Consensus 165 PTs~LDi~~Q~evl~ll~~l~~~~~~tvv~vlHDlN~-A~ryad~~i~lk-~G~i~a~G~p~e 225 (258)
T COG1120 165 PTSHLDIAHQIEVLELLRDLNREKGLTVVMVLHDLNL-AARYADHLILLK-DGKIVAQGTPEE 225 (258)
T ss_pred CccccCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHH-HHHhCCEEEEEE-CCeEEeecCcch
Confidence 9999999999999999999984 59999999999984 778999999998 589999998753
No 52
>COG1116 TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.6e-42 Score=363.83 Aligned_cols=193 Identities=26% Similarity=0.393 Sum_probs=173.1
Q ss_pred cceEEeeeeeEEEeCCcEEEEEccCCCChHHHHhhhcCCCCCCeeEEEEEEcCccCChhcccceeeEeecCCCCCCCCcH
Q 000997 840 DRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQETFARISGYCEQNDIHSPGLTV 919 (1194)
Q Consensus 840 ~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~~~~~~~gyv~Q~~~~~~~lTv 919 (1194)
+...+|+|||++|.+||+++|+||||||||||||+|+|..+ +.+|+|.++|.++. .....+|||+|++.++|.+||
T Consensus 14 ~~~~vl~~i~L~v~~GEfvsilGpSGcGKSTLLriiAGL~~--p~~G~V~~~g~~v~--~p~~~~~~vFQ~~~LlPW~Tv 89 (248)
T COG1116 14 GGVEVLEDINLSVEKGEFVAILGPSGCGKSTLLRLIAGLEK--PTSGEVLLDGRPVT--GPGPDIGYVFQEDALLPWLTV 89 (248)
T ss_pred CceEEeccceeEECCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCcccC--CCCCCEEEEeccCcccchhhH
Confidence 45789999999999999999999999999999999999987 56899999999873 235668999999999999999
Q ss_pred HHHHHHHhhhcCCCcCcHHHHHHHHHHHHHHcCCCcccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCC
Q 000997 920 LESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSGL 999 (1194)
Q Consensus 920 ~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEPTsgL 999 (1194)
+||+.|+...+. .+.+++.+++++.++.+||.+..+.. +.+|||||||||+|||||+.+|+||+||||+++|
T Consensus 90 ~~NV~l~l~~~~---~~~~e~~~~a~~~L~~VgL~~~~~~~-----P~qLSGGMrQRVaiARAL~~~P~lLLlDEPFgAL 161 (248)
T COG1116 90 LDNVALGLELRG---KSKAEARERAKELLELVGLAGFEDKY-----PHQLSGGMRQRVAIARALATRPKLLLLDEPFGAL 161 (248)
T ss_pred Hhhheehhhccc---cchHhHHHHHHHHHHHcCCcchhhcC-----ccccChHHHHHHHHHHHHhcCCCEEEEcCCcchh
Confidence 999999877653 34566667899999999999999886 3689999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHh-CCCEEEEEecCCcHHHHHhcCeEEEEccC
Q 000997 1000 DARAAAIVMRTVRNIVN-TGRTIVCTIHQPSIDIFESFDELLFMKRG 1045 (1194)
Q Consensus 1000 D~~~~~~i~~~l~~l~~-~g~tvi~~~H~~~~~~~~~~d~~~~l~~g 1045 (1194)
|+.++..+++.|.++.+ .++|||++|||.+ +...++|||++|.++
T Consensus 162 DalTR~~lq~~l~~lw~~~~~TvllVTHdi~-EAv~LsdRivvl~~~ 207 (248)
T COG1116 162 DALTREELQDELLRLWEETRKTVLLVTHDVD-EAVYLADRVVVLSNR 207 (248)
T ss_pred hHHHHHHHHHHHHHHHHhhCCEEEEEeCCHH-HHHhhhCEEEEecCC
Confidence 99999999999999865 5899999999987 667789999999854
No 53
>COG1121 ZnuC ABC-type Mn/Zn transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1e-41 Score=364.90 Aligned_cols=218 Identities=26% Similarity=0.404 Sum_probs=182.8
Q ss_pred eeEeecceeeeecccccccccccccceEEeeeeeEEEeCCcEEEEEccCCCChHHHHhhhcCCCCCCeeEEEEEEcCccC
Q 000997 816 SMAFGNINYFVDVPVELKQEGVLEDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPK 895 (1194)
Q Consensus 816 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 895 (1194)
.++++|+++.+ +..++|+||||++++|+++||+||||||||||+++|.|..+ +.+|+|.++|.+.
T Consensus 4 ~i~v~nl~v~y-------------~~~~vl~~i~l~v~~G~~~~iiGPNGaGKSTLlK~iLGll~--p~~G~i~~~g~~~ 68 (254)
T COG1121 4 MIEVENLTVSY-------------GNRPVLEDISLSVEKGEITALIGPNGAGKSTLLKAILGLLK--PSSGEIKIFGKPV 68 (254)
T ss_pred EEEEeeeEEEE-------------CCEeeeeccEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCc--CCcceEEEccccc
Confidence 35566666655 32369999999999999999999999999999999999776 5689999999987
Q ss_pred ChhcccceeeEeecCCCC--CCCCcHHHHHHHHhhhcCC-CcCcHHHHHHHHHHHHHHcCCCcccCCcccCCCCCCCCHH
Q 000997 896 RQETFARISGYCEQNDIH--SPGLTVLESLLFSAWLRLP-SEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTE 972 (1194)
Q Consensus 896 ~~~~~~~~~gyv~Q~~~~--~~~lTv~e~l~f~~~lr~~-~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgG 972 (1194)
....-+..+|||||...+ ...+||+|-+..+..-+.. .....+..++.++++|+.+|+.++++..++ .||||
T Consensus 69 ~~~~~~~~IgYVPQ~~~~d~~fP~tV~d~V~~g~~~~~g~~~~~~~~d~~~v~~aL~~Vgm~~~~~r~i~-----~LSGG 143 (254)
T COG1121 69 RKRRKRLRIGYVPQKSSVDRSFPITVKDVVLLGRYGKKGWFRRLNKKDKEKVDEALERVGMEDLRDRQIG-----ELSGG 143 (254)
T ss_pred cccccCCeEEEcCcccccCCCCCcCHHHHHHccCcccccccccccHHHHHHHHHHHHHcCchhhhCCccc-----ccCcH
Confidence 654445789999996422 2347999999886432221 011123346789999999999999998875 79999
Q ss_pred HHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCeEEEEccCcEEEEeC
Q 000997 973 QRKRLTIAVELVANPSIVFMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAG 1052 (1194)
Q Consensus 973 qrqrl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g 1052 (1194)
|+|||.|||||+++|++|+|||||+|+|+.++..++++|++++++|+||++++||++ .+.+.||+++.|. +++++.|
T Consensus 144 Q~QRV~lARAL~~~p~lllLDEP~~gvD~~~~~~i~~lL~~l~~eg~tIl~vtHDL~-~v~~~~D~vi~Ln--~~~~~~G 220 (254)
T COG1121 144 QKQRVLLARALAQNPDLLLLDEPFTGVDVAGQKEIYDLLKELRQEGKTVLMVTHDLG-LVMAYFDRVICLN--RHLIASG 220 (254)
T ss_pred HHHHHHHHHHhccCCCEEEecCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCcH-HhHhhCCEEEEEc--CeeEecc
Confidence 999999999999999999999999999999999999999999988999999999997 5888999999996 5799999
Q ss_pred CCCC
Q 000997 1053 PLGS 1056 (1194)
Q Consensus 1053 ~~~~ 1056 (1194)
++.+
T Consensus 221 ~~~~ 224 (254)
T COG1121 221 PPEE 224 (254)
T ss_pred Chhh
Confidence 9864
No 54
>COG3638 ABC-type phosphate/phosphonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=5.4e-42 Score=354.01 Aligned_cols=210 Identities=28% Similarity=0.393 Sum_probs=179.3
Q ss_pred cceEEeeeeeEEEeCCcEEEEEccCCCChHHHHhhhcCCCCCCeeEEEEEEcCccCCh------hcccceeeEeecCCCC
Q 000997 840 DRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ------ETFARISGYCEQNDIH 913 (1194)
Q Consensus 840 ~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~------~~~~~~~gyv~Q~~~~ 913 (1194)
+++++|+|||+.|++||++||+|||||||||||++|.|... +.+|+|.+||..+.. +.+++.+||++|++.+
T Consensus 15 ~~~~aL~~Vnl~I~~GE~VaiIG~SGaGKSTLLR~lngl~d--~t~G~i~~~g~~i~~~~~k~lr~~r~~iGmIfQ~~nL 92 (258)
T COG3638 15 GGHQALKDVNLEINQGEMVAIIGPSGAGKSTLLRSLNGLVD--PTSGEILFNGVQITKLKGKELRKLRRDIGMIFQQFNL 92 (258)
T ss_pred CCceeeeeEeEEeCCCcEEEEECCCCCcHHHHHHHHhcccC--CCcceEEecccchhccchHHHHHHHHhceeEeccCCc
Confidence 57899999999999999999999999999999999999766 568999999976432 3467889999999999
Q ss_pred CCCCcHHHHHHHHhhhcCC-----CcCcHHHHHHHHHHHHHHcCCCcccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCC
Q 000997 914 SPGLTVLESLLFSAWLRLP-----SEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPS 988 (1194)
Q Consensus 914 ~~~lTv~e~l~f~~~lr~~-----~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~ 988 (1194)
.+.++|.+|++.+..-+.+ -....++.+..+-++++.+|+.+.+-... ..|||||+|||+|||||+++|+
T Consensus 93 v~r~sv~~NVl~grl~~~s~~~slfglfsk~dk~~Al~aLervgi~~~A~qra-----~~LSGGQQQRVaIARaL~Q~pk 167 (258)
T COG3638 93 VPRLSVLENVLLGRLGYTSTWRSLFGLFSKEDKAQALDALERVGILDKAYQRA-----STLSGGQQQRVAIARALVQQPK 167 (258)
T ss_pred ccccHHHHHHHhhhcccchHHHHHhCCCCHHHHHHHHHHHHHcCcHHHHHHHh-----ccCCcchhHHHHHHHHHhcCCC
Confidence 9999999999876322211 12233444566778899999988776654 4799999999999999999999
Q ss_pred EEEEeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCCcHHHHHhcCeEEEEccCcEEEEeCCCCCch
Q 000997 989 IVFMDEPTSGLDARAAAIVMRTVRNIVN-TGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLGSKS 1058 (1194)
Q Consensus 989 illLDEPTsgLD~~~~~~i~~~l~~l~~-~g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~~~~~ 1058 (1194)
||+.|||+++|||.++..||+.|+++++ .|.|||++.||.+. ..++|||++-|+ .|+++|+||..+..
T Consensus 168 iILADEPvasLDp~~a~~Vm~~l~~in~~~g~Tvi~nLH~vdl-A~~Y~~Riigl~-~G~ivfDg~~~el~ 236 (258)
T COG3638 168 IILADEPVASLDPESAKKVMDILKDINQEDGITVIVNLHQVDL-AKKYADRIIGLK-AGRIVFDGPASELT 236 (258)
T ss_pred EEecCCcccccChhhHHHHHHHHHHHHHHcCCEEEEEechHHH-HHHHHhhheEec-CCcEEEeCChhhhh
Confidence 9999999999999999999999999975 59999999999875 567899999998 58999999986543
No 55
>COG1135 AbcC ABC-type metal ion transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.6e-41 Score=363.28 Aligned_cols=224 Identities=26% Similarity=0.374 Sum_probs=193.8
Q ss_pred cceeeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCceeeEEEECCccCCCCC------CCceEEEEecCCC
Q 000997 146 SKLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV------PPRTSAYVSQQDW 219 (1194)
Q Consensus 146 ~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~~------~~~~~~yv~Q~d~ 219 (1194)
...++|+|||+.|++|++.+|+|+||||||||++++.++-.|+ +|+|.++|.++.... .++.+|+++|+..
T Consensus 17 ~~~~al~~vsL~I~~GeI~GIIG~SGAGKSTLiR~iN~Le~Pt---sG~v~v~G~di~~l~~~~Lr~~R~~IGMIFQhFn 93 (339)
T COG1135 17 GTVTALDDVSLEIPKGEIFGIIGYSGAGKSTLLRLINLLERPT---SGSVFVDGQDLTALSEAELRQLRQKIGMIFQHFN 93 (339)
T ss_pred CceeeeccceEEEcCCcEEEEEcCCCCcHHHHHHHHhccCCCC---CceEEEcCEecccCChHHHHHHHhhccEEecccc
Confidence 3467999999999999999999999999999999999988776 999999998876654 3578999999999
Q ss_pred CCCCCCHHHHHHHhhhccCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhccCcchhHHHHHHHHHhCCcccccccc
Q 000997 220 QVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLV 299 (1194)
Q Consensus 220 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~k~~~~~~~~~~~~~~~~l~~lgL~~~~dt~v 299 (1194)
++...||.||++|..+..+... .+.+.++.++|+.+||++.+|..
T Consensus 94 LLssrTV~~NvA~PLeiag~~k----------------------------------~ei~~RV~elLelVgL~dk~~~y- 138 (339)
T COG1135 94 LLSSRTVFENVAFPLELAGVPK----------------------------------AEIKQRVAELLELVGLSDKADRY- 138 (339)
T ss_pred ccccchHHhhhhhhHhhcCCCH----------------------------------HHHHHHHHHHHHHcCChhhhccC-
Confidence 9999999999999887765211 12345689999999999888764
Q ss_pred cCccCCCCChhhhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEE
Q 000997 300 GDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVI 379 (1194)
Q Consensus 300 g~~~~~~LSGGqkqRvsia~al~~~~~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vi 379 (1194)
..+|||||||||+|||||+.+|+||++|||||+|||.|+..|.+.|+++.+.+| .||+.++|-++-+-+.||||.
T Consensus 139 ----P~qLSGGQKQRVaIARALa~~P~iLL~DEaTSALDP~TT~sIL~LL~~In~~lg-lTIvlITHEm~Vvk~ic~rVa 213 (339)
T COG1135 139 ----PAQLSGGQKQRVAIARALANNPKILLCDEATSALDPETTQSILELLKDINRELG-LTIVLITHEMEVVKRICDRVA 213 (339)
T ss_pred ----chhcCcchhhHHHHHHHHhcCCCEEEecCccccCChHHHHHHHHHHHHHHHHcC-CEEEEEechHHHHHHHhhhhe
Confidence 457999999999999999999999999999999999999999999999988775 556668899999999999999
Q ss_pred EEcCCeEEEecChhhHHHHHHhcCCCCCCCCChhHHHHhhc
Q 000997 380 LLSEGQIVYQGPRVSVLDFFASMGFSCPKRKNVADFLQEVT 420 (1194)
Q Consensus 380 lL~~G~iv~~G~~~~~~~~F~~~G~~cp~~~~~adfl~~v~ 420 (1194)
+|++|+++++|+..++ |..|.+.-..+|+.+..
T Consensus 214 vm~~G~lvE~G~v~~v--------F~~Pk~~~t~~fi~~~~ 246 (339)
T COG1135 214 VLDQGRLVEEGTVSEV--------FANPKHAITQEFIGETL 246 (339)
T ss_pred EeeCCEEEEeccHHHh--------hcCcchHHHHHHHHhhc
Confidence 9999999999999887 44566555556665544
No 56
>COG1125 OpuBA ABC-type proline/glycine betaine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=7.8e-42 Score=354.29 Aligned_cols=205 Identities=26% Similarity=0.355 Sum_probs=183.8
Q ss_pred cccceEEeeeeeEEEeCCcEEEEEccCCCChHHHHhhhcCCCCCCeeEEEEEEcCccCCh---hcccceeeEeecCCCCC
Q 000997 838 LEDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ---ETFARISGYCEQNDIHS 914 (1194)
Q Consensus 838 ~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~---~~~~~~~gyv~Q~~~~~ 914 (1194)
.++++.+++|+|++|++||+++++|||||||||+|++|.++.. +.+|+|+|||.++.. ...+|.+|||-|.-.+|
T Consensus 10 ~y~~~~av~~v~l~I~~gef~vliGpSGsGKTTtLkMINrLie--pt~G~I~i~g~~i~~~d~~~LRr~IGYviQqigLF 87 (309)
T COG1125 10 RYGNKKAVDDVNLTIEEGEFLVLIGPSGSGKTTTLKMINRLIE--PTSGEILIDGEDISDLDPVELRRKIGYVIQQIGLF 87 (309)
T ss_pred hcCCceeeeeeeEEecCCeEEEEECCCCCcHHHHHHHHhcccC--CCCceEEECCeecccCCHHHHHHhhhhhhhhcccC
Confidence 4457889999999999999999999999999999999999877 579999999998754 45789999999999999
Q ss_pred CCCcHHHHHHHHhhhcCCCcCcHHHHHHHHHHHHHHcCCCc--ccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEE
Q 000997 915 PGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTS--LSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFM 992 (1194)
Q Consensus 915 ~~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~--~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illL 992 (1194)
|++||.||+.+-..+. ..++++.+++++|+|++++|.+ +++.+ +.+|||||+|||.+||||+++|+||+|
T Consensus 88 Ph~Tv~eNIa~VP~L~---~w~k~~i~~r~~ELl~lvgL~p~~~~~Ry-----P~eLSGGQQQRVGv~RALAadP~ilLM 159 (309)
T COG1125 88 PHLTVAENIATVPKLL---GWDKERIKKRADELLDLVGLDPSEYADRY-----PHELSGGQQQRVGVARALAADPPILLM 159 (309)
T ss_pred CCccHHHHHHhhhhhc---CCCHHHHHHHHHHHHHHhCCCHHHHhhcC-----chhcCcchhhHHHHHHHHhcCCCeEee
Confidence 9999999998876554 3466778889999999999975 66654 468999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCeEEEEccCcEEEEeCCC
Q 000997 993 DEPTSGLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1194)
Q Consensus 993 DEPTsgLD~~~~~~i~~~l~~l~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~ 1054 (1194)
|||+++|||.++..+++.++++.++ |+|||++|||.+ +.+.++||+.+|+ +|+++-.+++
T Consensus 160 DEPFgALDpI~R~~lQ~e~~~lq~~l~kTivfVTHDid-EA~kLadri~vm~-~G~i~Q~~~P 220 (309)
T COG1125 160 DEPFGALDPITRKQLQEEIKELQKELGKTIVFVTHDID-EALKLADRIAVMD-AGEIVQYDTP 220 (309)
T ss_pred cCCccccChhhHHHHHHHHHHHHHHhCCEEEEEecCHH-HHHhhhceEEEec-CCeEEEeCCH
Confidence 9999999999999999999999765 999999999987 7889999999998 5788877765
No 57
>COG1125 OpuBA ABC-type proline/glycine betaine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=1.5e-41 Score=352.13 Aligned_cols=210 Identities=26% Similarity=0.369 Sum_probs=185.0
Q ss_pred ceeeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCceeeEEEECCccCCCCC---CCceEEEEecCCCCCCC
Q 000997 147 KLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV---PPRTSAYVSQQDWQVAE 223 (1194)
Q Consensus 147 ~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~~---~~~~~~yv~Q~d~~~~~ 223 (1194)
.+.+++|+|++|++||+++++|||||||||+||+|.+++.|+ +|+|.+||.++.+.. .++.+|||-|+-.+||+
T Consensus 13 ~~~av~~v~l~I~~gef~vliGpSGsGKTTtLkMINrLiept---~G~I~i~g~~i~~~d~~~LRr~IGYviQqigLFPh 89 (309)
T COG1125 13 NKKAVDDVNLTIEEGEFLVLIGPSGSGKTTTLKMINRLIEPT---SGEILIDGEDISDLDPVELRRKIGYVIQQIGLFPH 89 (309)
T ss_pred CceeeeeeeEEecCCeEEEEECCCCCcHHHHHHHHhcccCCC---CceEEECCeecccCCHHHHHHhhhhhhhhcccCCC
Confidence 457999999999999999999999999999999999999887 999999999987765 47899999999999999
Q ss_pred CCHHHHHHHhhhccCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhccCcchhHHHHHHHHHhCCcccccccccCcc
Q 000997 224 MTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEM 303 (1194)
Q Consensus 224 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~k~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~ 303 (1194)
+||.|||.+-..+.+-. .++.+.+++++|+.+||+.. ...+++
T Consensus 90 ~Tv~eNIa~VP~L~~w~----------------------------------k~~i~~r~~ELl~lvgL~p~---~~~~Ry 132 (309)
T COG1125 90 LTVAENIATVPKLLGWD----------------------------------KERIKKRADELLDLVGLDPS---EYADRY 132 (309)
T ss_pred ccHHHHHHhhhhhcCCC----------------------------------HHHHHHHHHHHHHHhCCCHH---HHhhcC
Confidence 99999998866555421 11234568999999999852 123456
Q ss_pred CCCCChhhhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEcC
Q 000997 304 LKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSE 383 (1194)
Q Consensus 304 ~~~LSGGqkqRvsia~al~~~~~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~~ 383 (1194)
...|||||+|||.+||||+.+|+|++||||+++|||-++.++.+.++++.+..++| |+.++|+.+|++.++|||++|++
T Consensus 133 P~eLSGGQQQRVGv~RALAadP~ilLMDEPFgALDpI~R~~lQ~e~~~lq~~l~kT-ivfVTHDidEA~kLadri~vm~~ 211 (309)
T COG1125 133 PHELSGGQQQRVGVARALAADPPILLMDEPFGALDPITRKQLQEEIKELQKELGKT-IVFVTHDIDEALKLADRIAVMDA 211 (309)
T ss_pred chhcCcchhhHHHHHHHHhcCCCeEeecCCccccChhhHHHHHHHHHHHHHHhCCE-EEEEecCHHHHHhhhceEEEecC
Confidence 77899999999999999999999999999999999999999999999998877655 55689999999999999999999
Q ss_pred CeEEEecChhhHHH
Q 000997 384 GQIVYQGPRVSVLD 397 (1194)
Q Consensus 384 G~iv~~G~~~~~~~ 397 (1194)
|+++.++++++++.
T Consensus 212 G~i~Q~~~P~~il~ 225 (309)
T COG1125 212 GEIVQYDTPDEILA 225 (309)
T ss_pred CeEEEeCCHHHHHh
Confidence 99999999999874
No 58
>COG1136 SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms]
Probab=100.00 E-value=2.8e-41 Score=356.82 Aligned_cols=192 Identities=30% Similarity=0.454 Sum_probs=166.9
Q ss_pred eEEeeeeeEEEeCCcEEEEEccCCCChHHHHhhhcCCCCCCeeEEEEEEcCccCCh------h-cccceeeEeecCCCCC
Q 000997 842 LQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ------E-TFARISGYCEQNDIHS 914 (1194)
Q Consensus 842 ~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~------~-~~~~~~gyv~Q~~~~~ 914 (1194)
..+|++||++|++||++||||||||||||||++|.|... +.+|.|.++|.++.. . -+++.+|||+|+..+.
T Consensus 18 ~~~L~~v~l~i~~Ge~vaI~GpSGSGKSTLLniig~ld~--pt~G~v~i~g~d~~~l~~~~~~~~R~~~iGfvFQ~~nLl 95 (226)
T COG1136 18 VEALKDVNLEIEAGEFVAIVGPSGSGKSTLLNLLGGLDK--PTSGEVLINGKDLTKLSEKELAKLRRKKIGFVFQNFNLL 95 (226)
T ss_pred eEecccceEEEcCCCEEEEECCCCCCHHHHHHHHhcccC--CCCceEEECCEEcCcCCHHHHHHHHHHhEEEECccCCCC
Confidence 689999999999999999999999999999999999887 468999999976532 1 2345799999999999
Q ss_pred CCCcHHHHHHHHhhhcCCCcCcHHHHHHHHHHHHHHcCCCcccC-CcccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEe
Q 000997 915 PGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSG-ALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMD 993 (1194)
Q Consensus 915 ~~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~-~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illLD 993 (1194)
|.+||+||+.+...+... .....++.++++++.+||.+..+ .. +.+|||||||||+|||||+.+|+|||.|
T Consensus 96 ~~ltv~ENv~lpl~~~~~---~~~~~~~~~~~l~~~lgl~~~~~~~~-----p~eLSGGqqQRVAIARAL~~~P~iilAD 167 (226)
T COG1136 96 PDLTVLENVELPLLIAGK---SAGRRKRAAEELLEVLGLEDRLLKKK-----PSELSGGQQQRVAIARALINNPKIILAD 167 (226)
T ss_pred CCCCHHHHHHhHHHHcCC---ChhHHHHHHHHHHHhcCChhhhccCC-----chhcCHHHHHHHHHHHHHhcCCCeEEee
Confidence 999999999987655432 22245667889999999986665 33 3689999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCeEEEEccC
Q 000997 994 EPTSGLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRG 1045 (1194)
Q Consensus 994 EPTsgLD~~~~~~i~~~l~~l~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~g 1045 (1194)
|||.+||+.++..|++++++++++ |+|||++|||| .+...|||++.|.+|
T Consensus 168 EPTgnLD~~t~~~V~~ll~~~~~~~g~tii~VTHd~--~lA~~~dr~i~l~dG 218 (226)
T COG1136 168 EPTGNLDSKTAKEVLELLRELNKERGKTIIMVTHDP--ELAKYADRVIELKDG 218 (226)
T ss_pred CccccCChHHHHHHHHHHHHHHHhcCCEEEEEcCCH--HHHHhCCEEEEEeCC
Confidence 999999999999999999999865 99999999996 477899999999864
No 59
>COG1118 CysA ABC-type sulfate/molybdate transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.9e-41 Score=361.46 Aligned_cols=207 Identities=29% Similarity=0.434 Sum_probs=186.3
Q ss_pred ccceEEeeeeeEEEeCCcEEEEEccCCCChHHHHhhhcCCCCCCeeEEEEEEcCc---cCCh-hcccceeeEeecCCCCC
Q 000997 839 EDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGY---PKRQ-ETFARISGYCEQNDIHS 914 (1194)
Q Consensus 839 ~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~---~~~~-~~~~~~~gyv~Q~~~~~ 914 (1194)
.+...+++|||+.|+.||++||+|||||||||||++|||+.+ +..|.|.+||. +... ....|.+|||+|+..+|
T Consensus 12 ~~~~~a~~di~l~i~~Ge~vaLlGpSGaGKsTlLRiIAGLe~--p~~G~I~~~~~~l~D~~~~~~~~R~VGfvFQ~YALF 89 (345)
T COG1118 12 FGAFGALDDISLDIKSGELVALLGPSGAGKSTLLRIIAGLET--PDAGRIRLNGRVLFDVSNLAVRDRKVGFVFQHYALF 89 (345)
T ss_pred cccccccccceeeecCCcEEEEECCCCCcHHHHHHHHhCcCC--CCCceEEECCEeccchhccchhhcceeEEEechhhc
Confidence 456778999999999999999999999999999999999987 56899999998 4433 34567899999999999
Q ss_pred CCCcHHHHHHHHhhhcCCCcCcHHHHHHHHHHHHHHcCCCcccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeC
Q 000997 915 PGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDE 994 (1194)
Q Consensus 915 ~~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illLDE 994 (1194)
++|||.+|+.|+...+ ....+..+.+.+++++++++.|.++++.+ +.+|||||||||++||||+.+|++|+|||
T Consensus 90 ~HmtVa~NIAFGl~~~-~~~p~~~~~r~rv~elL~lvqL~~la~ry-----P~QLSGGQrQRVALARALA~eP~vLLLDE 163 (345)
T COG1118 90 PHMTVADNIAFGLKVR-KERPSEAEIRARVEELLRLVQLEGLADRY-----PAQLSGGQRQRVALARALAVEPKVLLLDE 163 (345)
T ss_pred ccchHHhhhhhccccc-ccCCChhhHHHHHHHHHHHhcccchhhcC-----chhcChHHHHHHHHHHHhhcCCCeEeecC
Confidence 9999999999998776 33445677788999999999999999876 36899999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCeEEEEccCcEEEEeCCCC
Q 000997 995 PTSGLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLG 1055 (1194)
Q Consensus 995 PTsgLD~~~~~~i~~~l~~l~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~~ 1055 (1194)
|.++||+..+..+.+.|+++.++ |.|+|++|||+. +..+.+||+++|++ |+|+-.||+.
T Consensus 164 Pf~ALDa~vr~~lr~wLr~~~~~~~~ttvfVTHD~e-ea~~ladrvvvl~~-G~Ieqvg~p~ 223 (345)
T COG1118 164 PFGALDAKVRKELRRWLRKLHDRLGVTTVFVTHDQE-EALELADRVVVLNQ-GRIEQVGPPD 223 (345)
T ss_pred CchhhhHHHHHHHHHHHHHHHHhhCceEEEEeCCHH-HHHhhcceEEEecC-CeeeeeCCHH
Confidence 99999999999999999999876 999999999986 79999999999985 7999888864
No 60
>COG4555 NatA ABC-type Na+ transport system, ATPase component [Energy production and conversion / Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.5e-41 Score=340.67 Aligned_cols=201 Identities=27% Similarity=0.393 Sum_probs=183.2
Q ss_pred EEeeeeeEEEeCCcEEEEEccCCCChHHHHhhhcCCCCCCeeEEEEEEcCccCC--hhcccceeeEeecCCCCCCCCcHH
Q 000997 843 QLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKR--QETFARISGYCEQNDIHSPGLTVL 920 (1194)
Q Consensus 843 ~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~--~~~~~~~~gyv~Q~~~~~~~lTv~ 920 (1194)
++++||||+++.||++||+|+|||||||+|++|+++.. |.+|.|+++|.+.. +...++.+|.++-+..++..+|++
T Consensus 16 ~AvrdVSF~ae~Gei~GlLG~NGAGKTT~LRmiatlL~--P~~G~v~idg~d~~~~p~~vrr~IGVl~~e~glY~RlT~r 93 (245)
T COG4555 16 QAVRDVSFEAEEGEITGLLGENGAGKTTLLRMIATLLI--PDSGKVTIDGVDTVRDPSFVRRKIGVLFGERGLYARLTAR 93 (245)
T ss_pred hhhhheeEEeccceEEEEEcCCCCCchhHHHHHHHhcc--CCCceEEEeecccccChHHHhhhcceecCCcChhhhhhHH
Confidence 48999999999999999999999999999999999887 56999999998853 345788999999888889999999
Q ss_pred HHHHHHhhhcCCCcCcHHHHHHHHHHHHHHcCCCcccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCC
Q 000997 921 ESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSGLD 1000 (1194)
Q Consensus 921 e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEPTsgLD 1000 (1194)
|||.|.+.+. +....+.+++++++.+.++|.++.|+.++ ++|.|+||||+|||||+++|++++|||||||||
T Consensus 94 Enl~~Fa~L~---~l~~~~~kari~~l~k~l~l~~~~~rRv~-----~~S~G~kqkV~iARAlvh~P~i~vlDEP~sGLD 165 (245)
T COG4555 94 ENLKYFARLN---GLSRKEIKARIAELSKRLQLLEYLDRRVG-----EFSTGMKQKVAIARALVHDPSILVLDEPTSGLD 165 (245)
T ss_pred HHHHHHHHHh---hhhhhHHHHHHHHHHHHhChHHHHHHHHh-----hhchhhHHHHHHHHHHhcCCCeEEEcCCCCCcc
Confidence 9999999876 34556677889999999999999999875 799999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCeEEEEccCcEEEEeCCCC
Q 000997 1001 ARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLG 1055 (1194)
Q Consensus 1001 ~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~~ 1055 (1194)
..+.+.+.+.++++.+.|++||++||.++ ++...||+++++.+ |++++.|...
T Consensus 166 i~~~r~~~dfi~q~k~egr~viFSSH~m~-EvealCDrvivlh~-Gevv~~gs~~ 218 (245)
T COG4555 166 IRTRRKFHDFIKQLKNEGRAVIFSSHIMQ-EVEALCDRVIVLHK-GEVVLEGSIE 218 (245)
T ss_pred HHHHHHHHHHHHHhhcCCcEEEEecccHH-HHHHhhheEEEEec-CcEEEcCCHH
Confidence 99999999999999888999999999986 67779999999985 7999999863
No 61
>COG3839 MalK ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism]
Probab=100.00 E-value=5e-41 Score=375.29 Aligned_cols=217 Identities=29% Similarity=0.420 Sum_probs=193.9
Q ss_pred eeecceEeEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCceeeEEEECCccCCCCCC-CceEEEEecCCCCCCCCCHHH
Q 000997 150 ILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVP-PRTSAYVSQQDWQVAEMTVRE 228 (1194)
Q Consensus 150 iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lTV~E 228 (1194)
+|+|+|+.|++||+++|+|||||||||||++|||+..++ +|+|.++|.++++..| +|.+|+|+|+..+||+|||+|
T Consensus 18 ~l~~i~l~i~~Gef~vllGPSGcGKSTlLr~IAGLe~~~---~G~I~i~g~~vt~l~P~~R~iamVFQ~yALyPhmtV~~ 94 (338)
T COG3839 18 VLKDVNLDIEDGEFVVLLGPSGCGKSTLLRMIAGLEEPT---SGEILIDGRDVTDLPPEKRGIAMVFQNYALYPHMTVYE 94 (338)
T ss_pred eeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEECCCCChhHCCEEEEeCCccccCCCcHHH
Confidence 999999999999999999999999999999999999887 9999999999998776 489999999999999999999
Q ss_pred HHHHhhhccCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhccCcchhHHHHHHHHHhCCcccccccccCccCCCCC
Q 000997 229 TLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEMLKGIS 308 (1194)
Q Consensus 229 ~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~k~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~LS 308 (1194)
||.|+.+.++... .+.+.+++++.+.|+|++..|.+. +.||
T Consensus 95 Niaf~Lk~~~~~k----------------------------------~ei~~rV~eva~~L~l~~lL~r~P-----~~LS 135 (338)
T COG3839 95 NIAFGLKLRGVPK----------------------------------AEIDKRVKEVAKLLGLEHLLNRKP-----LQLS 135 (338)
T ss_pred HhhhhhhhCCCch----------------------------------HHHHHHHHHHHHHcCChhHHhcCc-----ccCC
Confidence 9999988765321 122456899999999999988754 5799
Q ss_pred hhhhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEcCCeEEE
Q 000997 309 GGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEGQIVY 388 (1194)
Q Consensus 309 GGqkqRvsia~al~~~~~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~~G~iv~ 388 (1194)
|||||||++||||+.+|++++||||+|.||+..+.++...++++.+.++ ++++.++|+..|+..++|+|++|++|++..
T Consensus 136 GGQrQRVAlaRAlVr~P~v~L~DEPlSnLDa~lR~~mr~ei~~lh~~l~-~T~IYVTHDq~EAmtladri~Vm~~G~i~Q 214 (338)
T COG3839 136 GGQRQRVALARALVRKPKVFLLDEPLSNLDAKLRVLMRSEIKKLHERLG-TTTIYVTHDQVEAMTLADRIVVMNDGRIQQ 214 (338)
T ss_pred hhhHHHHHHHHHHhcCCCEEEecCchhHhhHHHHHHHHHHHHHHHHhcC-CcEEEEcCCHHHHHhhCCEEEEEeCCeeee
Confidence 9999999999999999999999999999999999999999999877664 556668999999999999999999999999
Q ss_pred ecChhhHHHHHHhcCCCCCCCCChhHHHH
Q 000997 389 QGPRVSVLDFFASMGFSCPKRKNVADFLQ 417 (1194)
Q Consensus 389 ~G~~~~~~~~F~~~G~~cp~~~~~adfl~ 417 (1194)
.|++.++ |..|...-+|.|+-
T Consensus 215 ~g~p~el--------y~~P~n~fVA~FiG 235 (338)
T COG3839 215 VGTPLEL--------YERPANLFVAGFIG 235 (338)
T ss_pred cCChHHH--------hhCccchhhhhhcC
Confidence 9999998 45677777777754
No 62
>COG1131 CcmA ABC-type multidrug transport system, ATPase component [Defense mechanisms]
Probab=100.00 E-value=1.1e-40 Score=375.88 Aligned_cols=212 Identities=33% Similarity=0.474 Sum_probs=185.5
Q ss_pred ceeeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCceeeEEEECCccCCCC--CCCceEEEEecCCCCCCCC
Q 000997 147 KLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEF--VPPRTSAYVSQQDWQVAEM 224 (1194)
Q Consensus 147 ~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~--~~~~~~~yv~Q~d~~~~~l 224 (1194)
.+.+|+|||+.|++|++++|+|||||||||||++|+|++.|+ +|+|.++|.+.... ..++.+||++|++.+++.+
T Consensus 17 ~~~~l~~vs~~i~~Gei~gllG~NGAGKTTllk~l~gl~~p~---~G~i~i~G~~~~~~~~~~~~~igy~~~~~~~~~~l 93 (293)
T COG1131 17 DKTALDGVSFEVEPGEIFGLLGPNGAGKTTLLKILAGLLKPT---SGEILVLGYDVVKEPAKVRRRIGYVPQEPSLYPEL 93 (293)
T ss_pred CCEEEeceeEEEcCCeEEEEECCCCCCHHHHHHHHhCCcCCC---ceEEEEcCEeCccCHHHHHhheEEEccCCCCCccc
Confidence 357999999999999999999999999999999999999886 99999999887652 3457899999999999999
Q ss_pred CHHHHHHHhhhccCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhccCcchhHHHHHHHHHhCCcccccccccCccC
Q 000997 225 TVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEML 304 (1194)
Q Consensus 225 TV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~k~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~ 304 (1194)
||+|||.|.+++++.... ....+++++++.+||++..++.+
T Consensus 94 T~~e~l~~~~~l~~~~~~----------------------------------~~~~~~~~~l~~~~L~~~~~~~~----- 134 (293)
T COG1131 94 TVRENLEFFARLYGLSKE----------------------------------EAEERIEELLELFGLEDKANKKV----- 134 (293)
T ss_pred cHHHHHHHHHHHhCCChh----------------------------------HHHHHHHHHHHHcCCchhhCcch-----
Confidence 999999999988764310 01235889999999998555444
Q ss_pred CCCChhhhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEcCC
Q 000997 305 KGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEG 384 (1194)
Q Consensus 305 ~~LSGGqkqRvsia~al~~~~~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~~G 384 (1194)
++||+||||||+||.||+++|++|||||||+|||+.++.++++.|+++++. ++++|+..+|...++..+||+|++|++|
T Consensus 135 ~~lS~G~kqrl~ia~aL~~~P~lliLDEPt~GLDp~~~~~~~~~l~~l~~~-g~~tvlissH~l~e~~~~~d~v~il~~G 213 (293)
T COG1131 135 RTLSGGMKQRLSIALALLHDPELLILDEPTSGLDPESRREIWELLRELAKE-GGVTILLSTHILEEAEELCDRVIILNDG 213 (293)
T ss_pred hhcCHHHHHHHHHHHHHhcCCCEEEECCCCcCCCHHHHHHHHHHHHHHHhC-CCcEEEEeCCcHHHHHHhCCEEEEEeCC
Confidence 579999999999999999999999999999999999999999999999875 4466777889999999999999999999
Q ss_pred eEEEecChhhHHHHHHh
Q 000997 385 QIVYQGPRVSVLDFFAS 401 (1194)
Q Consensus 385 ~iv~~G~~~~~~~~F~~ 401 (1194)
++++.|+.+++...+..
T Consensus 214 ~~~~~g~~~~l~~~~~~ 230 (293)
T COG1131 214 KIIAEGTPEELKEKFGG 230 (293)
T ss_pred EEEEeCCHHHHHHhhcc
Confidence 99999999988766543
No 63
>COG3839 MalK ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism]
Probab=100.00 E-value=8.6e-41 Score=373.43 Aligned_cols=205 Identities=27% Similarity=0.378 Sum_probs=185.3
Q ss_pred ccceEEeeeeeEEEeCCcEEEEEccCCCChHHHHhhhcCCCCCCeeEEEEEEcCccCCh-hcccceeeEeecCCCCCCCC
Q 000997 839 EDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ-ETFARISGYCEQNDIHSPGL 917 (1194)
Q Consensus 839 ~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~-~~~~~~~gyv~Q~~~~~~~l 917 (1194)
++...+|+|||++++.||+++|+|||||||||||++|||+.. +.+|+|.|+|.+++. ....|.+|+|+|+..++|++
T Consensus 13 yg~~~~l~~i~l~i~~Gef~vllGPSGcGKSTlLr~IAGLe~--~~~G~I~i~g~~vt~l~P~~R~iamVFQ~yALyPhm 90 (338)
T COG3839 13 FGSFEVLKDVNLDIEDGEFVVLLGPSGCGKSTLLRMIAGLEE--PTSGEILIDGRDVTDLPPEKRGIAMVFQNYALYPHM 90 (338)
T ss_pred cCCceeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEECCCCChhHCCEEEEeCCccccCCC
Confidence 344349999999999999999999999999999999999987 579999999998865 34568899999999999999
Q ss_pred cHHHHHHHHhhhcCCCcCcHHHHHHHHHHHHHHcCCCcccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCC
Q 000997 918 TVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTS 997 (1194)
Q Consensus 918 Tv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEPTs 997 (1194)
||+||+.|+.+++. .++++.+++|+++.+.|++.++.+... .+|||||||||+|||||+++|++++||||.|
T Consensus 91 tV~~Niaf~Lk~~~---~~k~ei~~rV~eva~~L~l~~lL~r~P-----~~LSGGQrQRVAlaRAlVr~P~v~L~DEPlS 162 (338)
T COG3839 91 TVYENIAFGLKLRG---VPKAEIDKRVKEVAKLLGLEHLLNRKP-----LQLSGGQRQRVALARALVRKPKVFLLDEPLS 162 (338)
T ss_pred cHHHHhhhhhhhCC---CchHHHHHHHHHHHHHcCChhHHhcCc-----ccCChhhHHHHHHHHHHhcCCCEEEecCchh
Confidence 99999999987763 456777889999999999999999863 6899999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCeEEEEccCcEEEEeCCCC
Q 000997 998 GLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLG 1055 (1194)
Q Consensus 998 gLD~~~~~~i~~~l~~l~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~~ 1055 (1194)
+||+..+..+...|+++.++ |.|+|.+|||.. +...++||+++|. +|++...|++.
T Consensus 163 nLDa~lR~~mr~ei~~lh~~l~~T~IYVTHDq~-EAmtladri~Vm~-~G~i~Q~g~p~ 219 (338)
T COG3839 163 NLDAKLRVLMRSEIKKLHERLGTTTIYVTHDQV-EAMTLADRIVVMN-DGRIQQVGTPL 219 (338)
T ss_pred HhhHHHHHHHHHHHHHHHHhcCCcEEEEcCCHH-HHHhhCCEEEEEe-CCeeeecCChH
Confidence 99999999999999998765 999999999974 7888999999998 68999988764
No 64
>COG1118 CysA ABC-type sulfate/molybdate transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=9.2e-41 Score=356.17 Aligned_cols=223 Identities=31% Similarity=0.450 Sum_probs=188.8
Q ss_pred ceeeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCceeeEEEECCc---cCCCCCC-CceEEEEecCCCCCC
Q 000997 147 KLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGH---GFKEFVP-PRTSAYVSQQDWQVA 222 (1194)
Q Consensus 147 ~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~---~~~~~~~-~~~~~yv~Q~d~~~~ 222 (1194)
...+++|||+.|+.||+++|+|||||||||||++|||+..|+ +|.|.+||. +.+.... .|.+|||+|+..+|+
T Consensus 14 ~~~a~~di~l~i~~Ge~vaLlGpSGaGKsTlLRiIAGLe~p~---~G~I~~~~~~l~D~~~~~~~~R~VGfvFQ~YALF~ 90 (345)
T COG1118 14 AFGALDDISLDIKSGELVALLGPSGAGKSTLLRIIAGLETPD---AGRIRLNGRVLFDVSNLAVRDRKVGFVFQHYALFP 90 (345)
T ss_pred cccccccceeeecCCcEEEEECCCCCcHHHHHHHHhCcCCCC---CceEEECCEeccchhccchhhcceeEEEechhhcc
Confidence 356899999999999999999999999999999999999887 999999999 5555333 488999999999999
Q ss_pred CCCHHHHHHHhhhccCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhccCcchhHHHHHHHHHhCCcccccccccCc
Q 000997 223 EMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDE 302 (1194)
Q Consensus 223 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~k~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~ 302 (1194)
+|||.+||.|+.+++... | +..+.+.+++++|+.+.|++.++ +
T Consensus 91 HmtVa~NIAFGl~~~~~~-------------------p-------------~~~~~r~rv~elL~lvqL~~la~-----r 133 (345)
T COG1118 91 HMTVADNIAFGLKVRKER-------------------P-------------SEAEIRARVEELLRLVQLEGLAD-----R 133 (345)
T ss_pred cchHHhhhhhcccccccC-------------------C-------------ChhhHHHHHHHHHHHhcccchhh-----c
Confidence 999999999998776210 0 01122456888999999988665 4
Q ss_pred cCCCCChhhhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEc
Q 000997 303 MLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLS 382 (1194)
Q Consensus 303 ~~~~LSGGqkqRvsia~al~~~~~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~ 382 (1194)
+...|||||||||++||||+..|++|+||||+++||...+..+-+.|+++....+.|++ .++|+..|++++||+|++|+
T Consensus 134 yP~QLSGGQrQRVALARALA~eP~vLLLDEPf~ALDa~vr~~lr~wLr~~~~~~~~ttv-fVTHD~eea~~ladrvvvl~ 212 (345)
T COG1118 134 YPAQLSGGQRQRVALARALAVEPKVLLLDEPFGALDAKVRKELRRWLRKLHDRLGVTTV-FVTHDQEEALELADRVVVLN 212 (345)
T ss_pred CchhcChHHHHHHHHHHHhhcCCCeEeecCCchhhhHHHHHHHHHHHHHHHHhhCceEE-EEeCCHHHHHhhcceEEEec
Confidence 56789999999999999999999999999999999999999999999998876655554 58899999999999999999
Q ss_pred CCeEEEecChhhHHHHHHhcCCCCCCCCChhHHHHh
Q 000997 383 EGQIVYQGPRVSVLDFFASMGFSCPKRKNVADFLQE 418 (1194)
Q Consensus 383 ~G~iv~~G~~~~~~~~F~~~G~~cp~~~~~adfl~~ 418 (1194)
+|+|...||++++- ..|...-++.|+-+
T Consensus 213 ~G~Ieqvg~p~ev~--------~~P~s~fV~~f~G~ 240 (345)
T COG1118 213 QGRIEQVGPPDEVY--------DHPASRFVARFLGE 240 (345)
T ss_pred CCeeeeeCCHHHHh--------cCCCccceeccccc
Confidence 99999999999983 44555545555443
No 65
>COG1120 FepC ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism]
Probab=100.00 E-value=1.6e-40 Score=357.85 Aligned_cols=211 Identities=32% Similarity=0.442 Sum_probs=181.1
Q ss_pred ceeeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCceeeEEEECCccCCCCCC---CceEEEEecCCCCCCC
Q 000997 147 KLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVP---PRTSAYVSQQDWQVAE 223 (1194)
Q Consensus 147 ~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~ 223 (1194)
+++||+|+|+.+++|++++|+||||||||||||+|+|.++|. +|+|.++|+++.+... .+.+|||||.+...+.
T Consensus 14 ~~~il~~ls~~i~~G~i~~iiGpNG~GKSTLLk~l~g~l~p~---~G~V~l~g~~i~~~~~kelAk~ia~vpQ~~~~~~~ 90 (258)
T COG1120 14 GKPILDDLSFSIPKGEITGILGPNGSGKSTLLKCLAGLLKPK---SGEVLLDGKDIASLSPKELAKKLAYVPQSPSAPFG 90 (258)
T ss_pred CeeEEecceEEecCCcEEEEECCCCCCHHHHHHHHhccCCCC---CCEEEECCCchhhcCHHHHhhhEEEeccCCCCCCC
Confidence 357999999999999999999999999999999999999886 9999999999877654 4789999999888889
Q ss_pred CCHHHHHHHhhhccCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhccCcchhHHHHHHHHHhCCcccccccccCcc
Q 000997 224 MTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEM 303 (1194)
Q Consensus 224 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~k~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~ 303 (1194)
+||+|-+.++..-+. ..+ .....+....++..|+.+|+.+.++..+.
T Consensus 91 ~tV~d~V~~GR~p~~--~~~----------------------------~~~~~~D~~~v~~aL~~~~~~~la~r~~~--- 137 (258)
T COG1120 91 LTVYELVLLGRYPHL--GLF----------------------------GRPSKEDEEIVEEALELLGLEHLADRPVD--- 137 (258)
T ss_pred cEEeehHhhcCCccc--ccc----------------------------cCCCHhHHHHHHHHHHHhCcHHHhcCccc---
Confidence 999999988643210 000 00011123358889999999999988775
Q ss_pred CCCCChhhhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEcC
Q 000997 304 LKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSE 383 (1194)
Q Consensus 304 ~~~LSGGqkqRvsia~al~~~~~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~~ 383 (1194)
.|||||||||.||+||+++|++|+||||||+||...+.++++.++++++..+ .++|.++|+.+.+..+||++++|++
T Consensus 138 --~LSGGerQrv~iArALaQ~~~iLLLDEPTs~LDi~~Q~evl~ll~~l~~~~~-~tvv~vlHDlN~A~ryad~~i~lk~ 214 (258)
T COG1120 138 --ELSGGERQRVLIARALAQETPILLLDEPTSHLDIAHQIEVLELLRDLNREKG-LTVVMVLHDLNLAARYADHLILLKD 214 (258)
T ss_pred --ccChhHHHHHHHHHHHhcCCCEEEeCCCccccCHHHHHHHHHHHHHHHHhcC-CEEEEEecCHHHHHHhCCEEEEEEC
Confidence 5999999999999999999999999999999999999999999999997644 5555678999999999999999999
Q ss_pred CeEEEecChhhHH
Q 000997 384 GQIVYQGPRVSVL 396 (1194)
Q Consensus 384 G~iv~~G~~~~~~ 396 (1194)
|+++.+|++++++
T Consensus 215 G~i~a~G~p~evl 227 (258)
T COG1120 215 GKIVAQGTPEEVL 227 (258)
T ss_pred CeEEeecCcchhc
Confidence 9999999998875
No 66
>COG3842 PotA ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=7.3e-41 Score=375.94 Aligned_cols=223 Identities=30% Similarity=0.426 Sum_probs=197.4
Q ss_pred ceeeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCceeeEEEECCccCCCCCC-CceEEEEecCCCCCCCCC
Q 000997 147 KLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVP-PRTSAYVSQQDWQVAEMT 225 (1194)
Q Consensus 147 ~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lT 225 (1194)
...+|+|+|+.|++||+++|+|||||||||||++|||+..|+ +|+|.++|.++....+ +|.+++|+|+-.+||+||
T Consensus 17 ~~~av~~isl~i~~Gef~~lLGPSGcGKTTlLR~IAGfe~p~---~G~I~l~G~~i~~lpp~kR~ig~VFQ~YALFPHlt 93 (352)
T COG3842 17 DFTAVDDISLDIKKGEFVTLLGPSGCGKTTLLRMIAGFEQPS---SGEILLDGEDITDVPPEKRPIGMVFQSYALFPHMT 93 (352)
T ss_pred CeeEEecceeeecCCcEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEECCCCChhhcccceeecCcccCCCCc
Confidence 457999999999999999999999999999999999999887 9999999999988766 588999999999999999
Q ss_pred HHHHHHHhhhccCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhccCcchhHHHHHHHHHhCCcccccccccCccCC
Q 000997 226 VRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEMLK 305 (1194)
Q Consensus 226 V~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~k~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~ 305 (1194)
|+||+.|+.+.+.... + .+.+.+++++|+.++|++.++..+ .
T Consensus 94 V~~NVafGLk~~~~~~-------------------~--------------~~i~~rv~e~L~lV~L~~~~~R~p-----~ 135 (352)
T COG3842 94 VEENVAFGLKVRKKLK-------------------K--------------AEIKARVEEALELVGLEGFADRKP-----H 135 (352)
T ss_pred HHHHhhhhhhhcCCCC-------------------H--------------HHHHHHHHHHHHHcCchhhhhhCh-----h
Confidence 9999999987432111 0 112346899999999999777654 5
Q ss_pred CCChhhhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEcCCe
Q 000997 306 GISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEGQ 385 (1194)
Q Consensus 306 ~LSGGqkqRvsia~al~~~~~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~~G~ 385 (1194)
.|||||+|||+|||||+.+|++||||||.|+||..-+.++...|+++.+..| .+.|.++|+..|++.++|+|++|++|+
T Consensus 136 qLSGGQqQRVALARAL~~~P~vLLLDEPlSaLD~kLR~~mr~Elk~lq~~~g-iT~i~VTHDqeEAl~msDrI~Vm~~G~ 214 (352)
T COG3842 136 QLSGGQQQRVALARALVPEPKVLLLDEPLSALDAKLREQMRKELKELQRELG-ITFVYVTHDQEEALAMSDRIAVMNDGR 214 (352)
T ss_pred hhChHHHHHHHHHHHhhcCcchhhhcCcccchhHHHHHHHHHHHHHHHHhcC-CeEEEEECCHHHHhhhccceEEccCCc
Confidence 6999999999999999999999999999999999999999999999988774 555668899999999999999999999
Q ss_pred EEEecChhhHHHHHHhcCCCCCCCCChhHHHHhh
Q 000997 386 IVYQGPRVSVLDFFASMGFSCPKRKNVADFLQEV 419 (1194)
Q Consensus 386 iv~~G~~~~~~~~F~~~G~~cp~~~~~adfl~~v 419 (1194)
|...|+++++ |..|...-+|+|+-+.
T Consensus 215 I~Q~gtP~ei--------Y~~P~~~fVA~FiG~~ 240 (352)
T COG3842 215 IEQVGTPEEI--------YERPATRFVADFIGES 240 (352)
T ss_pred eeecCCHHHH--------hhCcchHHHHHHhCcc
Confidence 9999999998 5678888888988754
No 67
>COG1121 ZnuC ABC-type Mn/Zn transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=6.5e-40 Score=351.04 Aligned_cols=206 Identities=28% Similarity=0.435 Sum_probs=176.0
Q ss_pred eeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCceeeEEEECCccCCCCCCCceEEEEecC---CCCCCCCC
Q 000997 149 TILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVPPRTSAYVSQQ---DWQVAEMT 225 (1194)
Q Consensus 149 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~~~~~~~~yv~Q~---d~~~~~lT 225 (1194)
++|+|||+.+++|++++|+||||||||||+|+|.|++.|. +|+|.++|.+......+..+|||||. |+-|| +|
T Consensus 18 ~vl~~i~l~v~~G~~~~iiGPNGaGKSTLlK~iLGll~p~---~G~i~~~g~~~~~~~~~~~IgYVPQ~~~~d~~fP-~t 93 (254)
T COG1121 18 PVLEDISLSVEKGEITALIGPNGAGKSTLLKAILGLLKPS---SGEIKIFGKPVRKRRKRLRIGYVPQKSSVDRSFP-IT 93 (254)
T ss_pred eeeeccEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCcCC---cceEEEccccccccccCCeEEEcCcccccCCCCC-cC
Confidence 4999999999999999999999999999999999999886 99999999988776667899999995 55555 69
Q ss_pred HHHHHHHhhhccCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhccCcchhHHHHHHHHHhCCcccccccccCccCC
Q 000997 226 VRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEMLK 305 (1194)
Q Consensus 226 V~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~k~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~ 305 (1194)
|+|.+..+.--+. ..+... ..+....++++|+.+|+.+.+|..+|+
T Consensus 94 V~d~V~~g~~~~~--g~~~~~----------------------------~~~d~~~v~~aL~~Vgm~~~~~r~i~~---- 139 (254)
T COG1121 94 VKDVVLLGRYGKK--GWFRRL----------------------------NKKDKEKVDEALERVGMEDLRDRQIGE---- 139 (254)
T ss_pred HHHHHHccCcccc--cccccc----------------------------cHHHHHHHHHHHHHcCchhhhCCcccc----
Confidence 9999987632110 000000 011134589999999999999999885
Q ss_pred CCChhhhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEcCCe
Q 000997 306 GISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEGQ 385 (1194)
Q Consensus 306 ~LSGGqkqRvsia~al~~~~~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~~G~ 385 (1194)
|||||+|||-|||||+++|++|+|||||+|+|+.++..|++.|+++.+. +.+|++++|+...+.++||+|+.|+ ++
T Consensus 140 -LSGGQ~QRV~lARAL~~~p~lllLDEP~~gvD~~~~~~i~~lL~~l~~e--g~tIl~vtHDL~~v~~~~D~vi~Ln-~~ 215 (254)
T COG1121 140 -LSGGQKQRVLLARALAQNPDLLLLDEPFTGVDVAGQKEIYDLLKELRQE--GKTVLMVTHDLGLVMAYFDRVICLN-RH 215 (254)
T ss_pred -cCcHHHHHHHHHHHhccCCCEEEecCCcccCCHHHHHHHHHHHHHHHHC--CCEEEEEeCCcHHhHhhCCEEEEEc-Ce
Confidence 9999999999999999999999999999999999999999999999876 5556668999999999999999996 57
Q ss_pred EEEecChhhHH
Q 000997 386 IVYQGPRVSVL 396 (1194)
Q Consensus 386 iv~~G~~~~~~ 396 (1194)
+++.|+++++.
T Consensus 216 ~~~~G~~~~~~ 226 (254)
T COG1121 216 LIASGPPEEVL 226 (254)
T ss_pred eEeccChhhcc
Confidence 88999998875
No 68
>COG3842 PotA ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=1.4e-40 Score=373.71 Aligned_cols=209 Identities=26% Similarity=0.383 Sum_probs=187.0
Q ss_pred cccccceEEeeeeeEEEeCCcEEEEEccCCCChHHHHhhhcCCCCCCeeEEEEEEcCccCCh-hcccceeeEeecCCCCC
Q 000997 836 GVLEDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ-ETFARISGYCEQNDIHS 914 (1194)
Q Consensus 836 ~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~-~~~~~~~gyv~Q~~~~~ 914 (1194)
.+.++...+|+|||++|++||+++|+|||||||||||++|||... +.+|+|.++|.++.. ...+|.+|+|+|+..+|
T Consensus 12 ~k~yg~~~av~~isl~i~~Gef~~lLGPSGcGKTTlLR~IAGfe~--p~~G~I~l~G~~i~~lpp~kR~ig~VFQ~YALF 89 (352)
T COG3842 12 SKSFGDFTAVDDISLDIKKGEFVTLLGPSGCGKTTLLRMIAGFEQ--PSSGEILLDGEDITDVPPEKRPIGMVFQSYALF 89 (352)
T ss_pred eeecCCeeEEecceeeecCCcEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEECCCCChhhcccceeecCcccC
Confidence 344567899999999999999999999999999999999999987 568999999998765 34578899999999999
Q ss_pred CCCcHHHHHHHHhhhcCCCcCcHHHHHHHHHHHHHHcCCCcccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeC
Q 000997 915 PGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDE 994 (1194)
Q Consensus 915 ~~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illLDE 994 (1194)
|+|||.||+.|+.+++. ....++.++++++++++++|.+.++... .+|||||||||+|||||+.+|++|+|||
T Consensus 90 PHltV~~NVafGLk~~~--~~~~~~i~~rv~e~L~lV~L~~~~~R~p-----~qLSGGQqQRVALARAL~~~P~vLLLDE 162 (352)
T COG3842 90 PHMTVEENVAFGLKVRK--KLKKAEIKARVEEALELVGLEGFADRKP-----HQLSGGQQQRVALARALVPEPKVLLLDE 162 (352)
T ss_pred CCCcHHHHhhhhhhhcC--CCCHHHHHHHHHHHHHHcCchhhhhhCh-----hhhChHHHHHHHHHHHhhcCcchhhhcC
Confidence 99999999999977442 3345667789999999999999888764 6899999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCeEEEEccCcEEEEeCCCC
Q 000997 995 PTSGLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLG 1055 (1194)
Q Consensus 995 PTsgLD~~~~~~i~~~l~~l~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~~ 1055 (1194)
|.|+||..-+..+...++++.++ |.|.|++|||.. +.+.++|||.+|+ .|++.-.|++.
T Consensus 163 PlSaLD~kLR~~mr~Elk~lq~~~giT~i~VTHDqe-EAl~msDrI~Vm~-~G~I~Q~gtP~ 222 (352)
T COG3842 163 PLSALDAKLREQMRKELKELQRELGITFVYVTHDQE-EALAMSDRIAVMN-DGRIEQVGTPE 222 (352)
T ss_pred cccchhHHHHHHHHHHHHHHHHhcCCeEEEEECCHH-HHhhhccceEEcc-CCceeecCCHH
Confidence 99999999999999999999754 999999999976 7888999999998 58999888864
No 69
>COG1127 Ttg2A ABC-type transport system involved in resistance to organic solvents, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=8e-40 Score=338.83 Aligned_cols=211 Identities=24% Similarity=0.335 Sum_probs=180.1
Q ss_pred cceeeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCceeeEEEECCccCCCCC------CCceEEEEecCCC
Q 000997 146 SKLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV------PPRTSAYVSQQDW 219 (1194)
Q Consensus 146 ~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~~------~~~~~~yv~Q~d~ 219 (1194)
..+.||+|||+.|++||+++|+|||||||||||+.|.|++.|+ +|+|.+.|.++.+.. .++.+|+++|+-.
T Consensus 19 G~~~Ild~v~l~V~~Gei~~iiGgSGsGKStlLr~I~Gll~P~---~GeI~i~G~~i~~ls~~~~~~ir~r~GvlFQ~gA 95 (263)
T COG1127 19 GDRVILDGVDLDVPRGEILAILGGSGSGKSTLLRLILGLLRPD---KGEILIDGEDIPQLSEEELYEIRKRMGVLFQQGA 95 (263)
T ss_pred CCEEEecCceeeecCCcEEEEECCCCcCHHHHHHHHhccCCCC---CCeEEEcCcchhccCHHHHHHHHhheeEEeeccc
Confidence 3457999999999999999999999999999999999999987 999999999886653 2467999999999
Q ss_pred CCCCCCHHHHHHHhhhccCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhccCcchhHHHHHHHHHhCCcccccccc
Q 000997 220 QVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLV 299 (1194)
Q Consensus 220 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~k~~~~~~~~~~~~~~~~l~~lgL~~~~dt~v 299 (1194)
+|..+||+||+.|..+-+.. .|+.. .+..+..-|+..||... +
T Consensus 96 LFssltV~eNVafplre~~~-------------------lp~~~--------------i~~lv~~KL~~VGL~~~----~ 138 (263)
T COG1127 96 LFSSLTVFENVAFPLREHTK-------------------LPESL--------------IRELVLMKLELVGLRGA----A 138 (263)
T ss_pred cccccchhHhhheehHhhcc-------------------CCHHH--------------HHHHHHHHHHhcCCChh----h
Confidence 99999999999997653321 11111 12234555788899865 2
Q ss_pred cCccCCCCChhhhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEE
Q 000997 300 GDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVI 379 (1194)
Q Consensus 300 g~~~~~~LSGGqkqRvsia~al~~~~~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vi 379 (1194)
++.+...||||++||+++|||++.+|+++|+||||+||||.++..+.+.++++.+.++.|+ ++++|+.++++..+|+|+
T Consensus 139 ~~~~PsELSGGM~KRvaLARAialdPell~~DEPtsGLDPI~a~~~~~LI~~L~~~lg~T~-i~VTHDl~s~~~i~Drv~ 217 (263)
T COG1127 139 ADLYPSELSGGMRKRVALARAIALDPELLFLDEPTSGLDPISAGVIDELIRELNDALGLTV-IMVTHDLDSLLTIADRVA 217 (263)
T ss_pred hhhCchhhcchHHHHHHHHHHHhcCCCEEEecCCCCCCCcchHHHHHHHHHHHHHhhCCEE-EEEECChHHHHhhhceEE
Confidence 3456677999999999999999999999999999999999999999999999998876555 458899999999999999
Q ss_pred EEcCCeEEEecChhhHHH
Q 000997 380 LLSEGQIVYQGPRVSVLD 397 (1194)
Q Consensus 380 lL~~G~iv~~G~~~~~~~ 397 (1194)
+|.+|+|+.+|+++++.+
T Consensus 218 ~L~~gkv~~~Gt~~el~~ 235 (263)
T COG1127 218 VLADGKVIAEGTPEELLA 235 (263)
T ss_pred EEeCCEEEEeCCHHHHHh
Confidence 999999999999999864
No 70
>COG1117 PstB ABC-type phosphate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.2e-40 Score=334.47 Aligned_cols=207 Identities=26% Similarity=0.359 Sum_probs=178.3
Q ss_pred cceEEeeeeeEEEeCCcEEEEEccCCCChHHHHhhhcCCC---CCCeeEEEEEEcCccCCh-----hcccceeeEeecCC
Q 000997 840 DRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRK---TGGIIEGDIYISGYPKRQ-----ETFARISGYCEQND 911 (1194)
Q Consensus 840 ~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~---~~~~~~G~i~i~g~~~~~-----~~~~~~~gyv~Q~~ 911 (1194)
+.+++|+|||+.|++++++||||||||||||||++|.... ++-.++|+|.++|.++.. ...|+.+|+|+|.+
T Consensus 18 g~~~aL~~i~l~i~~~~VTAlIGPSGcGKST~LR~lNRmndl~~~~r~~G~v~~~g~ni~~~~~d~~~lRr~vGMVFQkP 97 (253)
T COG1117 18 GDKHALKDINLDIPKNKVTALIGPSGCGKSTLLRCLNRMNDLIPGARVEGEVLLDGKNIYDPKVDVVELRRRVGMVFQKP 97 (253)
T ss_pred CchhhhccCceeccCCceEEEECCCCcCHHHHHHHHHhhcccCcCceEEEEEEECCeeccCCCCCHHHHHHHheeeccCC
Confidence 5788999999999999999999999999999999999853 344678999999987633 35788999999999
Q ss_pred CCCCCCcHHHHHHHHhhhcCCCcCcHHHHHHHHHHHHHHcCCCc-ccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCEE
Q 000997 912 IHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTS-LSGALIGLPGINGLSTEQRKRLTIAVELVANPSIV 990 (1194)
Q Consensus 912 ~~~~~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~-~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~il 990 (1194)
.-|| +|++||+.|+.++....+ ++.++.|++.++...|.+ ..|.+... ..+|||||+|||||||||+.+|+||
T Consensus 98 nPFp-~SIydNVayG~r~~g~~~---~~ldeiVe~sLk~AaLWdEVKDrL~~s--a~~LSGGQQQRLcIARalAv~PeVl 171 (253)
T COG1117 98 NPFP-MSIYDNVAYGLRLHGIKD---KELDEIVESSLKKAALWDEVKDRLHKS--ALGLSGGQQQRLCIARALAVKPEVL 171 (253)
T ss_pred CCCC-chHHHHHHHhHHhhccch---HHHHHHHHHHHHHhHhHHHhHHHhhCC--ccCCChhHHHHHHHHHHHhcCCcEE
Confidence 9999 899999999988765432 566788999998888865 34444322 3579999999999999999999999
Q ss_pred EEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCeEEEEccCcEEEEeCCCC
Q 000997 991 FMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLG 1055 (1194)
Q Consensus 991 lLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~~ 1055 (1194)
+||||||+|||.+...|-+++.+|. +.-|||++||.+. ...+..|+..++.. |+++.+|+..
T Consensus 172 LmDEPtSALDPIsT~kIEeLi~eLk-~~yTIviVTHnmq-QAaRvSD~taFf~~-G~LvE~g~T~ 233 (253)
T COG1117 172 LMDEPTSALDPISTLKIEELITELK-KKYTIVIVTHNMQ-QAARVSDYTAFFYL-GELVEFGPTD 233 (253)
T ss_pred EecCcccccCchhHHHHHHHHHHHH-hccEEEEEeCCHH-HHHHHhHhhhhhcc-cEEEEEcCHH
Confidence 9999999999999999999999997 5799999999986 57788899999985 7999999863
No 71
>COG2884 FtsE Predicted ATPase involved in cell division [Cell division and chromosome partitioning]
Probab=100.00 E-value=7.2e-40 Score=326.10 Aligned_cols=199 Identities=27% Similarity=0.363 Sum_probs=174.3
Q ss_pred eEEeeeeeEEEeCCcEEEEEccCCCChHHHHhhhcCCCCCCeeEEEEEEcCccCCh------hcccceeeEeecCCCCCC
Q 000997 842 LQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ------ETFARISGYCEQNDIHSP 915 (1194)
Q Consensus 842 ~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~------~~~~~~~gyv~Q~~~~~~ 915 (1194)
+++|+||||.+++||++-|+|||||||||||++|.+... +..|+|.++|+++.. .-.+|.+|+|+||..+.+
T Consensus 15 ~~aL~~vs~~i~~Gef~fl~GpSGAGKSTllkLi~~~e~--pt~G~i~~~~~dl~~l~~~~iP~LRR~IGvVFQD~rLL~ 92 (223)
T COG2884 15 REALRDVSFHIPKGEFVFLTGPSGAGKSTLLKLIYGEER--PTRGKILVNGHDLSRLKGREIPFLRRQIGVVFQDFRLLP 92 (223)
T ss_pred chhhhCceEeecCceEEEEECCCCCCHHHHHHHHHhhhc--CCCceEEECCeecccccccccchhhheeeeEeeeccccc
Confidence 679999999999999999999999999999999999776 568999999998643 235789999999999999
Q ss_pred CCcHHHHHHHHhhhcCCCcCcHHHHHHHHHHHHHHcCCCcccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCC
Q 000997 916 GLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEP 995 (1194)
Q Consensus 916 ~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEP 995 (1194)
..||+||+.|...... .+..+.+++|.++++.+||.+.++.+ +.+|||||+|||+||||++.+|++|+.|||
T Consensus 93 ~~tvyeNVA~pL~v~G---~~~~~i~~rV~~~L~~VgL~~k~~~l-----P~~LSGGEQQRvaIARAiV~~P~vLlADEP 164 (223)
T COG2884 93 DRTVYENVALPLRVIG---KPPREIRRRVSEVLDLVGLKHKARAL-----PSQLSGGEQQRVAIARAIVNQPAVLLADEP 164 (223)
T ss_pred cchHhhhhhhhhhccC---CCHHHHHHHHHHHHHHhccchhhhcC-----ccccCchHHHHHHHHHHHccCCCeEeecCC
Confidence 9999999999876553 34566678899999999999888765 358999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHh-cCeEEEEccCcEEEEeCC
Q 000997 996 TSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFES-FDELLFMKRGGELIYAGP 1053 (1194)
Q Consensus 996 TsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~-~d~~~~l~~gG~~~~~g~ 1053 (1194)
|.+|||..+..||+++.++...|.|||+.|||.+ +... -.|++.|. .|+++....
T Consensus 165 TGNLDp~~s~~im~lfeeinr~GtTVl~ATHd~~--lv~~~~~rvl~l~-~Grl~~d~~ 220 (223)
T COG2884 165 TGNLDPDLSWEIMRLFEEINRLGTTVLMATHDLE--LVNRMRHRVLALE-DGRLVRDES 220 (223)
T ss_pred CCCCChHHHHHHHHHHHHHhhcCcEEEEEeccHH--HHHhccCcEEEEe-CCEEEeccc
Confidence 9999999999999999999989999999999954 4444 46788887 578887654
No 72
>COG1116 TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=8.6e-40 Score=344.73 Aligned_cols=192 Identities=24% Similarity=0.356 Sum_probs=170.2
Q ss_pred eeeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCceeeEEEECCccCCCCCCCceEEEEecCCCCCCCCCHH
Q 000997 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVPPRTSAYVSQQDWQVAEMTVR 227 (1194)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lTV~ 227 (1194)
..+|+|||++|.+||+++|+|||||||||||++|+|+..|. +|+|.++|.++ ..+...++||+|++.++|-+||+
T Consensus 16 ~~vl~~i~L~v~~GEfvsilGpSGcGKSTLLriiAGL~~p~---~G~V~~~g~~v--~~p~~~~~~vFQ~~~LlPW~Tv~ 90 (248)
T COG1116 16 VEVLEDINLSVEKGEFVAILGPSGCGKSTLLRLIAGLEKPT---SGEVLLDGRPV--TGPGPDIGYVFQEDALLPWLTVL 90 (248)
T ss_pred eEEeccceeEECCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCccc--CCCCCCEEEEeccCcccchhhHH
Confidence 57999999999999999999999999999999999999887 99999999887 34667899999999999999999
Q ss_pred HHHHHhhhccCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhccCcchhHHHHHHHHHhCCcccccccccCccCCCC
Q 000997 228 ETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEMLKGI 307 (1194)
Q Consensus 228 E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~k~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~L 307 (1194)
||+.|+....+... .+...+++.+|+.+||.+..|. +...|
T Consensus 91 ~NV~l~l~~~~~~~----------------------------------~e~~~~a~~~L~~VgL~~~~~~-----~P~qL 131 (248)
T COG1116 91 DNVALGLELRGKSK----------------------------------AEARERAKELLELVGLAGFEDK-----YPHQL 131 (248)
T ss_pred hhheehhhccccch----------------------------------HhHHHHHHHHHHHcCCcchhhc-----Ccccc
Confidence 99999887654211 1112358889999999988775 45679
Q ss_pred ChhhhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEcCC
Q 000997 308 SGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEG 384 (1194)
Q Consensus 308 SGGqkqRvsia~al~~~~~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~~G 384 (1194)
||||||||+|||||+.+|++|+||||+++||+.|+.++.+.|.++.+..+ .||+.++|+.+|+..++|||++|+++
T Consensus 132 SGGMrQRVaiARAL~~~P~lLLlDEPFgALDalTR~~lq~~l~~lw~~~~-~TvllVTHdi~EAv~LsdRivvl~~~ 207 (248)
T COG1116 132 SGGMRQRVAIARALATRPKLLLLDEPFGALDALTREELQDELLRLWEETR-KTVLLVTHDVDEAVYLADRVVVLSNR 207 (248)
T ss_pred ChHHHHHHHHHHHHhcCCCEEEEcCCcchhhHHHHHHHHHHHHHHHHhhC-CEEEEEeCCHHHHHhhhCEEEEecCC
Confidence 99999999999999999999999999999999999999999999887654 55666899999999999999999983
No 73
>COG4555 NatA ABC-type Na+ transport system, ATPase component [Energy production and conversion / Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.4e-40 Score=330.85 Aligned_cols=207 Identities=29% Similarity=0.355 Sum_probs=183.2
Q ss_pred ceeeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCceeeEEEECCccCCCCC--CCceEEEEecCCCCCCCC
Q 000997 147 KLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV--PPRTSAYVSQQDWQVAEM 224 (1194)
Q Consensus 147 ~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~~--~~~~~~yv~Q~d~~~~~l 224 (1194)
...+++||||.++.||+++|+|||||||||+|++|++++.|+ +|.|+++|.+..... .++.+|.++.+..++..|
T Consensus 14 ~v~AvrdVSF~ae~Gei~GlLG~NGAGKTT~LRmiatlL~P~---~G~v~idg~d~~~~p~~vrr~IGVl~~e~glY~Rl 90 (245)
T COG4555 14 KVQAVRDVSFEAEEGEITGLLGENGAGKTTLLRMIATLLIPD---SGKVTIDGVDTVRDPSFVRRKIGVLFGERGLYARL 90 (245)
T ss_pred HHhhhhheeEEeccceEEEEEcCCCCCchhHHHHHHHhccCC---CceEEEeecccccChHHHhhhcceecCCcChhhhh
Confidence 445899999999999999999999999999999999999887 999999998875432 468899999888889999
Q ss_pred CHHHHHHHhhhccCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhccCcchhHHHHHHHHHhCCcccccccccCccC
Q 000997 225 TVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEML 304 (1194)
Q Consensus 225 TV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~k~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~ 304 (1194)
|++|||.|.+++.+.. + .+.+.+++.+.+.|+|..|.|+.+|+
T Consensus 91 T~rEnl~~Fa~L~~l~----------~------------------------~~~kari~~l~k~l~l~~~~~rRv~~--- 133 (245)
T COG4555 91 TARENLKYFARLNGLS----------R------------------------KEIKARIAELSKRLQLLEYLDRRVGE--- 133 (245)
T ss_pred hHHHHHHHHHHHhhhh----------h------------------------hHHHHHHHHHHHHhChHHHHHHHHhh---
Confidence 9999999988876422 1 12245689999999999999999984
Q ss_pred CCCChhhhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEcCC
Q 000997 305 KGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEG 384 (1194)
Q Consensus 305 ~~LSGGqkqRvsia~al~~~~~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~~G 384 (1194)
+|-|+||||+|||||+.+|+++++||||||||..++..+.+.++++.. .+.+|+..+|..+|+..+||+|++|++|
T Consensus 134 --~S~G~kqkV~iARAlvh~P~i~vlDEP~sGLDi~~~r~~~dfi~q~k~--egr~viFSSH~m~EvealCDrvivlh~G 209 (245)
T COG4555 134 --FSTGMKQKVAIARALVHDPSILVLDEPTSGLDIRTRRKFHDFIKQLKN--EGRAVIFSSHIMQEVEALCDRVIVLHKG 209 (245)
T ss_pred --hchhhHHHHHHHHHHhcCCCeEEEcCCCCCccHHHHHHHHHHHHHhhc--CCcEEEEecccHHHHHHhhheEEEEecC
Confidence 999999999999999999999999999999999999999999998864 2456666889999999999999999999
Q ss_pred eEEEecChhhHHH
Q 000997 385 QIVYQGPRVSVLD 397 (1194)
Q Consensus 385 ~iv~~G~~~~~~~ 397 (1194)
++++.|+.+++..
T Consensus 210 evv~~gs~~~l~~ 222 (245)
T COG4555 210 EVVLEGSIEALDA 222 (245)
T ss_pred cEEEcCCHHHHHH
Confidence 9999999988754
No 74
>COG1117 PstB ABC-type phosphate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=5.5e-40 Score=332.76 Aligned_cols=221 Identities=25% Similarity=0.376 Sum_probs=182.4
Q ss_pred eeeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHhcCcC--CCCceeeEEEECCccCCCCC-----CCceEEEEecCCCC
Q 000997 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLG--HHLQVSGKITYNGHGFKEFV-----PPRTSAYVSQQDWQ 220 (1194)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~--~~~~~~G~i~~~G~~~~~~~-----~~~~~~yv~Q~d~~ 220 (1194)
+.+|+|||+.|+++++||++|||||||||||++|....+ +..+++|+|.|+|+++.+.. .++.+|+|+|.|..
T Consensus 20 ~~aL~~i~l~i~~~~VTAlIGPSGcGKST~LR~lNRmndl~~~~r~~G~v~~~g~ni~~~~~d~~~lRr~vGMVFQkPnP 99 (253)
T COG1117 20 KHALKDINLDIPKNKVTALIGPSGCGKSTLLRCLNRMNDLIPGARVEGEVLLDGKNIYDPKVDVVELRRRVGMVFQKPNP 99 (253)
T ss_pred hhhhccCceeccCCceEEEECCCCcCHHHHHHHHHhhcccCcCceEEEEEEECCeeccCCCCCHHHHHHHheeeccCCCC
Confidence 469999999999999999999999999999999987643 45688999999999875542 46899999999999
Q ss_pred CCCCCHHHHHHHhhhccCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhccCcchhHHHHHHHHHhCCcc-cccccc
Q 000997 221 VAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDT-CADTLV 299 (1194)
Q Consensus 221 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~k~~~~~~~~~~~~~~~~l~~lgL~~-~~dt~v 299 (1194)
|| +|++||+.|+.+.+|... +.+ +.+++..|+.-+|.+ ..|.+
T Consensus 100 Fp-~SIydNVayG~r~~g~~~--~~l--------------------------------deiVe~sLk~AaLWdEVKDrL- 143 (253)
T COG1117 100 FP-MSIYDNVAYGLRLHGIKD--KEL--------------------------------DEIVESSLKKAALWDEVKDRL- 143 (253)
T ss_pred CC-chHHHHHHHhHHhhccch--HHH--------------------------------HHHHHHHHHHhHhHHHhHHHh-
Confidence 99 899999999998876432 111 223555555555532 33332
Q ss_pred cCccCCCCChhhhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEE
Q 000997 300 GDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVI 379 (1194)
Q Consensus 300 g~~~~~~LSGGqkqRvsia~al~~~~~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vi 379 (1194)
++...+|||||+||++|||||+-+|+|||||||||+|||.++..|-+++.++.+ .-+|+.++|++.++....|+..
T Consensus 144 -~~sa~~LSGGQQQRLcIARalAv~PeVlLmDEPtSALDPIsT~kIEeLi~eLk~---~yTIviVTHnmqQAaRvSD~ta 219 (253)
T COG1117 144 -HKSALGLSGGQQQRLCIARALAVKPEVLLMDEPTSALDPISTLKIEELITELKK---KYTIVIVTHNMQQAARVSDYTA 219 (253)
T ss_pred -hCCccCCChhHHHHHHHHHHHhcCCcEEEecCcccccCchhHHHHHHHHHHHHh---ccEEEEEeCCHHHHHHHhHhhh
Confidence 123457999999999999999999999999999999999999999999999874 4566668999999999999999
Q ss_pred EEcCCeEEEecChhhHHHHHHhcCCCCCCCCChhHHH
Q 000997 380 LLSEGQIVYQGPRVSVLDFFASMGFSCPKRKNVADFL 416 (1194)
Q Consensus 380 lL~~G~iv~~G~~~~~~~~F~~~G~~cp~~~~~adfl 416 (1194)
.+..|+++++|+.+++ |.-|.++...||+
T Consensus 220 Ff~~G~LvE~g~T~~i--------F~~P~~~~TedYi 248 (253)
T COG1117 220 FFYLGELVEFGPTDKI--------FTNPKHKRTEDYI 248 (253)
T ss_pred hhcccEEEEEcCHHhh--------hcCccHHHHHHHh
Confidence 9999999999999887 5567776666665
No 75
>PRK13537 nodulation ABC transporter NodI; Provisional
Probab=100.00 E-value=4.6e-39 Score=366.35 Aligned_cols=203 Identities=29% Similarity=0.400 Sum_probs=178.0
Q ss_pred cceEEeeeeeEEEeCCcEEEEEccCCCChHHHHhhhcCCCCCCeeEEEEEEcCccCCh--hcccceeeEeecCCCCCCCC
Q 000997 840 DRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ--ETFARISGYCEQNDIHSPGL 917 (1194)
Q Consensus 840 ~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~--~~~~~~~gyv~Q~~~~~~~l 917 (1194)
+++.+|+||||++++||++||+||||||||||+++|+|... +.+|+|.++|.++.. ...++.+|||+|++.+++.+
T Consensus 18 ~~~~~l~~vsl~i~~Gei~gllGpNGaGKSTLl~~l~Gl~~--p~~G~v~i~G~~~~~~~~~~~~~ig~v~q~~~~~~~~ 95 (306)
T PRK13537 18 GDKLVVDGLSFHVQRGECFGLLGPNGAGKTTTLRMLLGLTH--PDAGSISLCGEPVPSRARHARQRVGVVPQFDNLDPDF 95 (306)
T ss_pred CCeEEEecceEEEeCCcEEEEECCCCCCHHHHHHHHhcCCC--CCceEEEECCEecccchHHHHhcEEEEeccCcCCCCC
Confidence 44679999999999999999999999999999999999876 468999999998643 23567899999999999999
Q ss_pred cHHHHHHHHhhhcCCCcCcHHHHHHHHHHHHHHcCCCcccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCC
Q 000997 918 TVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTS 997 (1194)
Q Consensus 918 Tv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEPTs 997 (1194)
||+||+.|.+.++. ....+....++++++.+++.+..++.+ ++||+|||||++||+||+.+|++|||||||+
T Consensus 96 tv~e~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrl~la~aL~~~P~lllLDEPt~ 167 (306)
T PRK13537 96 TVRENLLVFGRYFG---LSAAAARALVPPLLEFAKLENKADAKV-----GELSGGMKRRLTLARALVNDPDVLVLDEPTT 167 (306)
T ss_pred cHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCCchHhcCch-----hhCCHHHHHHHHHHHHHhCCCCEEEEeCCCc
Confidence 99999998765542 223334456789999999988777764 5799999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCeEEEEccCcEEEEeCCC
Q 000997 998 GLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1194)
Q Consensus 998 gLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~ 1054 (1194)
|||+.++..+++.|++++++|+|||++||+++ ++.+.||++++|++ |++++.|++
T Consensus 168 gLD~~~~~~l~~~l~~l~~~g~till~sH~l~-e~~~~~d~i~il~~-G~i~~~g~~ 222 (306)
T PRK13537 168 GLDPQARHLMWERLRSLLARGKTILLTTHFME-EAERLCDRLCVIEE-GRKIAEGAP 222 (306)
T ss_pred CCCHHHHHHHHHHHHHHHhCCCEEEEECCCHH-HHHHhCCEEEEEEC-CEEEEECCH
Confidence 99999999999999999878999999999986 57788999999984 799999985
No 76
>COG3638 ABC-type phosphate/phosphonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.7e-39 Score=335.52 Aligned_cols=216 Identities=25% Similarity=0.356 Sum_probs=181.6
Q ss_pred ceeeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCceeeEEEECCccCCCCC------CCceEEEEecCCCC
Q 000997 147 KLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV------PPRTSAYVSQQDWQ 220 (1194)
Q Consensus 147 ~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~~------~~~~~~yv~Q~d~~ 220 (1194)
.+++|+|||+.|++||+++|+|||||||||||++|.|..++. +|+|.+||.++.... .++.+||++|++.+
T Consensus 16 ~~~aL~~Vnl~I~~GE~VaiIG~SGaGKSTLLR~lngl~d~t---~G~i~~~g~~i~~~~~k~lr~~r~~iGmIfQ~~nL 92 (258)
T COG3638 16 GHQALKDVNLEINQGEMVAIIGPSGAGKSTLLRSLNGLVDPT---SGEILFNGVQITKLKGKELRKLRRDIGMIFQQFNL 92 (258)
T ss_pred CceeeeeEeEEeCCCcEEEEECCCCCcHHHHHHHHhcccCCC---cceEEecccchhccchHHHHHHHHhceeEeccCCc
Confidence 457999999999999999999999999999999999988876 999999998776553 24789999999999
Q ss_pred CCCCCHHHHHHHhhhccCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhccCcchhHHHHHHHHHhCCccccccccc
Q 000997 221 VAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVG 300 (1194)
Q Consensus 221 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~k~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg 300 (1194)
.+.+||.+|+..+..-+ .+.+ ....+..+..| +..+-..|+.+|+.+.+-++.+
T Consensus 93 v~r~sv~~NVl~grl~~--~s~~---------~slfglfsk~d---------------k~~Al~aLervgi~~~A~qra~ 146 (258)
T COG3638 93 VPRLSVLENVLLGRLGY--TSTW---------RSLFGLFSKED---------------KAQALDALERVGILDKAYQRAS 146 (258)
T ss_pred ccccHHHHHHHhhhccc--chHH---------HHHhCCCCHHH---------------HHHHHHHHHHcCcHHHHHHHhc
Confidence 99999999998864322 1111 11223332222 3346678999999998888776
Q ss_pred CccCCCCChhhhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEE
Q 000997 301 DEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVIL 380 (1194)
Q Consensus 301 ~~~~~~LSGGqkqRvsia~al~~~~~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vil 380 (1194)
.|||||+|||+|||||+.+|++++-|||+++||+.++.++++.|++++...|.|+|+ .+|..+-+.++||||+-
T Consensus 147 -----~LSGGQQQRVaIARaL~Q~pkiILADEPvasLDp~~a~~Vm~~l~~in~~~g~Tvi~-nLH~vdlA~~Y~~Riig 220 (258)
T COG3638 147 -----TLSGGQQQRVAIARALVQQPKIILADEPVASLDPESAKKVMDILKDINQEDGITVIV-NLHQVDLAKKYADRIIG 220 (258)
T ss_pred -----cCCcchhHHHHHHHHHhcCCCEEecCCcccccChhhHHHHHHHHHHHHHHcCCEEEE-EechHHHHHHHHhhheE
Confidence 499999999999999999999999999999999999999999999999876656555 56778999999999999
Q ss_pred EcCCeEEEecChhhHHH
Q 000997 381 LSEGQIVYQGPRVSVLD 397 (1194)
Q Consensus 381 L~~G~iv~~G~~~~~~~ 397 (1194)
|++|+|+|.||++++-+
T Consensus 221 l~~G~ivfDg~~~el~~ 237 (258)
T COG3638 221 LKAGRIVFDGPASELTD 237 (258)
T ss_pred ecCCcEEEeCChhhhhH
Confidence 99999999999988654
No 77
>TIGR02314 ABC_MetN D-methionine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of the D-methionine ABC transporter complex. Known members belong to the Proteobacteria.
Probab=100.00 E-value=1.9e-38 Score=363.78 Aligned_cols=201 Identities=26% Similarity=0.331 Sum_probs=176.3
Q ss_pred eEEeeeeeEEEeCCcEEEEEccCCCChHHHHhhhcCCCCCCeeEEEEEEcCccCChh------cccceeeEeecCCCCCC
Q 000997 842 LQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQE------TFARISGYCEQNDIHSP 915 (1194)
Q Consensus 842 ~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~------~~~~~~gyv~Q~~~~~~ 915 (1194)
..+|+||||++++||++||+||||||||||+++|+|..+ +.+|+|.++|.++... ..++.+||++|+..+++
T Consensus 18 ~~~L~~vsl~i~~Gei~gIiG~sGaGKSTLlr~I~gl~~--p~~G~I~i~G~~i~~~~~~~l~~~r~~Ig~v~Q~~~l~~ 95 (343)
T TIGR02314 18 IQALNNVSLHVPAGQIYGVIGASGAGKSTLIRCVNLLER--PTSGSVIVDGQDLTTLSNSELTKARRQIGMIFQHFNLLS 95 (343)
T ss_pred eEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCceEEEECCEECCcCCHHHHHHHhcCEEEEECCccccc
Confidence 579999999999999999999999999999999999877 5689999999876431 23668999999999999
Q ss_pred CCcHHHHHHHHhhhcCCCcCcHHHHHHHHHHHHHHcCCCcccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCC
Q 000997 916 GLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEP 995 (1194)
Q Consensus 916 ~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEP 995 (1194)
..||+||+.|..... .....+.++++.++++.++|.+..+... ..|||||||||+|||||+.+|++|+||||
T Consensus 96 ~~tv~eni~~~~~~~---~~~~~~~~~~v~e~l~~vgL~~~~~~~~-----~~LSgGqkQRV~IARAL~~~P~iLLlDEP 167 (343)
T TIGR02314 96 SRTVFGNVALPLELD---NTPKDEIKRKVTELLALVGLGDKHDSYP-----SNLSGGQKQRVAIARALASNPKVLLCDEA 167 (343)
T ss_pred cCcHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCchhhhCCh-----hhCCHHHHHHHHHHHHHHhCCCEEEEeCC
Confidence 999999999875433 1234455667889999999988877653 58999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCeEEEEccCcEEEEeCCC
Q 000997 996 TSGLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1194)
Q Consensus 996 TsgLD~~~~~~i~~~l~~l~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~ 1054 (1194)
||+||+.++..+++.|+++.++ |.|||++||+++ .+.+.||++++|+ +|+++..|+.
T Consensus 168 ts~LD~~t~~~i~~lL~~l~~~~g~tiiliTH~~~-~v~~~~d~v~vl~-~G~iv~~g~~ 225 (343)
T TIGR02314 168 TSALDPATTQSILELLKEINRRLGLTILLITHEMD-VVKRICDCVAVIS-NGELIEQGTV 225 (343)
T ss_pred cccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEE-CCEEEEEcCH
Confidence 9999999999999999999765 999999999976 4668899999998 5899999985
No 78
>COG1136 SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms]
Probab=100.00 E-value=1.2e-38 Score=336.90 Aligned_cols=196 Identities=26% Similarity=0.419 Sum_probs=166.4
Q ss_pred ceeeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCceeeEEEECCccCCCCCC-------CceEEEEecCCC
Q 000997 147 KLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVP-------PRTSAYVSQQDW 219 (1194)
Q Consensus 147 ~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~~~-------~~~~~yv~Q~d~ 219 (1194)
..++|+|||+.|++||+++|+|||||||||||++|+|...|+ +|.|.++|.++..... ++.+|||+|+..
T Consensus 17 ~~~~L~~v~l~i~~Ge~vaI~GpSGSGKSTLLniig~ld~pt---~G~v~i~g~d~~~l~~~~~~~~R~~~iGfvFQ~~n 93 (226)
T COG1136 17 KVEALKDVNLEIEAGEFVAIVGPSGSGKSTLLNLLGGLDKPT---SGEVLINGKDLTKLSEKELAKLRRKKIGFVFQNFN 93 (226)
T ss_pred ceEecccceEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCC---CceEEECCEEcCcCCHHHHHHHHHHhEEEECccCC
Confidence 368999999999999999999999999999999999998876 9999999988776542 367999999999
Q ss_pred CCCCCCHHHHHHHhhhccCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhccCcchhHHHHHHHHHhCCccccc-cc
Q 000997 220 QVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCAD-TL 298 (1194)
Q Consensus 220 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~k~~~~~~~~~~~~~~~~l~~lgL~~~~d-t~ 298 (1194)
++|++||.||+..+..+.+.... .....++.+++.+||.+..+ ..
T Consensus 94 Ll~~ltv~ENv~lpl~~~~~~~~----------------------------------~~~~~~~~l~~~lgl~~~~~~~~ 139 (226)
T COG1136 94 LLPDLTVLENVELPLLIAGKSAG----------------------------------RRKRAAEELLEVLGLEDRLLKKK 139 (226)
T ss_pred CCCCCCHHHHHHhHHHHcCCChh----------------------------------HHHHHHHHHHHhcCChhhhccCC
Confidence 99999999999987665543210 11234778899999987655 44
Q ss_pred ccCccCCCCChhhhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeE
Q 000997 299 VGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDV 378 (1194)
Q Consensus 299 vg~~~~~~LSGGqkqRvsia~al~~~~~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~v 378 (1194)
+ ..|||||||||+|||||+.+|++++.||||.+||+.++..|++.++++++..+ ++|+.++|+ +++...|||+
T Consensus 140 p-----~eLSGGqqQRVAIARAL~~~P~iilADEPTgnLD~~t~~~V~~ll~~~~~~~g-~tii~VTHd-~~lA~~~dr~ 212 (226)
T COG1136 140 P-----SELSGGQQQRVAIARALINNPKIILADEPTGNLDSKTAKEVLELLRELNKERG-KTIIMVTHD-PELAKYADRV 212 (226)
T ss_pred c-----hhcCHHHHHHHHHHHHHhcCCCeEEeeCccccCChHHHHHHHHHHHHHHHhcC-CEEEEEcCC-HHHHHhCCEE
Confidence 4 46999999999999999999999999999999999999999999999987654 455556665 5677899999
Q ss_pred EEEcCCeE
Q 000997 379 ILLSEGQI 386 (1194)
Q Consensus 379 ilL~~G~i 386 (1194)
+.|.+|++
T Consensus 213 i~l~dG~~ 220 (226)
T COG1136 213 IELKDGKI 220 (226)
T ss_pred EEEeCCee
Confidence 99999994
No 79
>COG1137 YhbG ABC-type (unclassified) transport system, ATPase component [General function prediction only]
Probab=100.00 E-value=2.3e-39 Score=324.50 Aligned_cols=213 Identities=22% Similarity=0.322 Sum_probs=187.3
Q ss_pred ccccccccceEEeeeeeEEEeCCcEEEEEccCCCChHHHHhhhcCCCCCCeeEEEEEEcCccCChh----cccceeeEee
Q 000997 833 KQEGVLEDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQE----TFARISGYCE 908 (1194)
Q Consensus 833 ~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~----~~~~~~gyv~ 908 (1194)
.+..+.+++++++++||+.+++||++||+|||||||||.+.++.|... +.+|.|.+||.+++.. +.+..+||+|
T Consensus 8 ~~l~K~y~kr~Vv~~Vsl~v~~GEiVGLLGPNGAGKTT~Fymi~Glv~--~d~G~i~ld~~diT~lPm~~RArlGigYLp 85 (243)
T COG1137 8 ENLAKSYKKRKVVNDVSLEVNSGEIVGLLGPNGAGKTTTFYMIVGLVR--PDSGKILLDDEDITKLPMHKRARLGIGYLP 85 (243)
T ss_pred hhhhHhhCCeeeeeeeeEEEcCCcEEEEECCCCCCceeEEEEEEEEEe--cCCceEEECCcccccCChHHHhhcCccccc
Confidence 344556788999999999999999999999999999999999999877 5689999999987642 2344689999
Q ss_pred cCCCCCCCCcHHHHHHHHhhhcCCCcCcHHHHHHHHHHHHHHcCCCcccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCC
Q 000997 909 QNDIHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPS 988 (1194)
Q Consensus 909 Q~~~~~~~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~ 988 (1194)
|++..|-.+||+||++.....+.. +....+++..++++++.+++.++++..- ..||||||+|+.|||||+.+|+
T Consensus 86 QE~SIFr~LtV~dNi~~vlE~~~~-d~~~~~~~~~l~~LL~ef~i~hlr~~~a-----~sLSGGERRR~EIARaLa~~P~ 159 (243)
T COG1137 86 QEASIFRKLTVEDNIMAVLEIREK-DLKKAERKEELDALLEEFHITHLRDSKA-----YSLSGGERRRVEIARALAANPK 159 (243)
T ss_pred ccchHhhcCcHHHHHHHHHhhhhc-chhHHHHHHHHHHHHHHhchHHHhcCcc-----cccccchHHHHHHHHHHhcCCC
Confidence 999999999999999876665532 2233566677889999999999998753 4799999999999999999999
Q ss_pred EEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCeEEEEccCcEEEEeCCCC
Q 000997 989 IVFMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLG 1055 (1194)
Q Consensus 989 illLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~~ 1055 (1194)
.++||||++|+||.+...|.++++.|.++|..|++|-|... +....|||.+++.+ |++...|.+.
T Consensus 160 fiLLDEPFAGVDPiaV~dIq~iI~~L~~rgiGvLITDHNVR-EtL~i~dRaYIi~~-G~vla~G~p~ 224 (243)
T COG1137 160 FILLDEPFAGVDPIAVIDIQRIIKHLKDRGIGVLITDHNVR-ETLDICDRAYIISD-GKVLAEGSPE 224 (243)
T ss_pred EEEecCCccCCCchhHHHHHHHHHHHHhCCceEEEccccHH-HHHhhhheEEEEec-CeEEecCCHH
Confidence 99999999999999999999999999999999999999987 78899999999985 7999999864
No 80
>cd03261 ABC_Org_Solvent_Resistant ABC (ATP-binding cassette) transport system involved in resistant to organic solvents; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.3e-38 Score=348.87 Aligned_cols=203 Identities=27% Similarity=0.376 Sum_probs=173.2
Q ss_pred ceEEeeeeeEEEeCCcEEEEEccCCCChHHHHhhhcCCCCCCeeEEEEEEcCccCCh------hcccceeeEeecCCCCC
Q 000997 841 RLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ------ETFARISGYCEQNDIHS 914 (1194)
Q Consensus 841 ~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~------~~~~~~~gyv~Q~~~~~ 914 (1194)
.+.+|+|+||++++||++||+||||||||||+++|+|..+ +.+|+|.++|.++.. ..+++.+||++|++.++
T Consensus 12 ~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~--p~~G~i~~~g~~~~~~~~~~~~~~~~~i~~v~q~~~~~ 89 (235)
T cd03261 12 GRTVLKGVDLDVRRGEILAIIGPSGSGKSTLLRLIVGLLR--PDSGEVLIDGEDISGLSEAELYRLRRRMGMLFQSGALF 89 (235)
T ss_pred CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEEccccChhhHHHHhcceEEEccCcccC
Confidence 4579999999999999999999999999999999999876 468999999987532 23456799999999999
Q ss_pred CCCcHHHHHHHHhhhcCCCcCcHHHHHHHHHHHHHHcCCCcccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeC
Q 000997 915 PGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDE 994 (1194)
Q Consensus 915 ~~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illLDE 994 (1194)
+.+||+||+.+...... .....+..+.++++++.+++.+..+..+ ..|||||||||+||+||+.+|+||+|||
T Consensus 90 ~~~tv~~~l~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSgG~~qrv~ia~al~~~p~llllDE 162 (235)
T cd03261 90 DSLTVFENVAFPLREHT--RLSEEEIREIVLEKLEAVGLRGAEDLYP-----AELSGGMKKRVALARALALDPELLLYDE 162 (235)
T ss_pred CCCcHHHHHHHHHhhcc--CCCHHHHHHHHHHHHHHcCCchhhcCCh-----hhCCHHHHHHHHHHHHHhcCCCEEEecC
Confidence 99999999988643221 1233344566788999999987666543 5799999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCeEEEEccCcEEEEeCCC
Q 000997 995 PTSGLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1194)
Q Consensus 995 PTsgLD~~~~~~i~~~l~~l~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~ 1054 (1194)
||+|||+.++..+++.|++++++ |+|||+++|+++ ++.+.||++++|++ |++++.|+.
T Consensus 163 Pt~~LD~~~~~~l~~~l~~~~~~~~~tvi~vsH~~~-~~~~~~d~v~~l~~-G~i~~~g~~ 221 (235)
T cd03261 163 PTAGLDPIASGVIDDLIRSLKKELGLTSIMVTHDLD-TAFAIADRIAVLYD-GKIVAEGTP 221 (235)
T ss_pred CcccCCHHHHHHHHHHHHHHHHhcCcEEEEEecCHH-HHHHhcCEEEEEEC-CeEEEecCH
Confidence 99999999999999999999764 899999999986 46678999999984 789988874
No 81
>TIGR02314 ABC_MetN D-methionine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of the D-methionine ABC transporter complex. Known members belong to the Proteobacteria.
Probab=100.00 E-value=4.1e-38 Score=361.13 Aligned_cols=206 Identities=22% Similarity=0.335 Sum_probs=177.7
Q ss_pred eeeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCceeeEEEECCccCCCCCC------CceEEEEecCCCCC
Q 000997 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVP------PRTSAYVSQQDWQV 221 (1194)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~~~------~~~~~yv~Q~d~~~ 221 (1194)
.++|+|||++|++||+++|+||||||||||+++|+|+++|+ +|+|.++|.++..... ++.++|++|+..++
T Consensus 18 ~~~L~~vsl~i~~Gei~gIiG~sGaGKSTLlr~I~gl~~p~---~G~I~i~G~~i~~~~~~~l~~~r~~Ig~v~Q~~~l~ 94 (343)
T TIGR02314 18 IQALNNVSLHVPAGQIYGVIGASGAGKSTLIRCVNLLERPT---SGSVIVDGQDLTTLSNSELTKARRQIGMIFQHFNLL 94 (343)
T ss_pred eEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---ceEEEECCEECCcCCHHHHHHHhcCEEEEECCcccc
Confidence 47999999999999999999999999999999999999876 9999999998865432 46799999999999
Q ss_pred CCCCHHHHHHHhhhccCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhccCcchhHHHHHHHHHhCCcccccccccC
Q 000997 222 AEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGD 301 (1194)
Q Consensus 222 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~k~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 301 (1194)
+.+||+||+.|+....+... .+...++.++++.+||.+..|..+
T Consensus 95 ~~~tv~eni~~~~~~~~~~~----------------------------------~~~~~~v~e~l~~vgL~~~~~~~~-- 138 (343)
T TIGR02314 95 SSRTVFGNVALPLELDNTPK----------------------------------DEIKRKVTELLALVGLGDKHDSYP-- 138 (343)
T ss_pred ccCcHHHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCCchhhhCCh--
Confidence 99999999998654332110 011234778899999998877655
Q ss_pred ccCCCCChhhhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEE
Q 000997 302 EMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILL 381 (1194)
Q Consensus 302 ~~~~~LSGGqkqRvsia~al~~~~~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL 381 (1194)
..|||||||||+|||||+.+|++|+|||||||||+.++..+++.|+++.+..+ .+|+.++|..+.+.++||+|++|
T Consensus 139 ---~~LSgGqkQRV~IARAL~~~P~iLLlDEPts~LD~~t~~~i~~lL~~l~~~~g-~tiiliTH~~~~v~~~~d~v~vl 214 (343)
T TIGR02314 139 ---SNLSGGQKQRVAIARALASNPKVLLCDEATSALDPATTQSILELLKEINRRLG-LTILLITHEMDVVKRICDCVAVI 214 (343)
T ss_pred ---hhCCHHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcC-CEEEEEeCCHHHHHHhCCEEEEE
Confidence 46999999999999999999999999999999999999999999999976544 45666889999999999999999
Q ss_pred cCCeEEEecChhhHH
Q 000997 382 SEGQIVYQGPRVSVL 396 (1194)
Q Consensus 382 ~~G~iv~~G~~~~~~ 396 (1194)
++|++++.|+.+++.
T Consensus 215 ~~G~iv~~g~~~~v~ 229 (343)
T TIGR02314 215 SNGELIEQGTVSEIF 229 (343)
T ss_pred ECCEEEEEcCHHHHH
Confidence 999999999988873
No 82
>PRK11650 ugpC glycerol-3-phosphate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.8e-38 Score=367.14 Aligned_cols=203 Identities=26% Similarity=0.367 Sum_probs=178.5
Q ss_pred ceEEeeeeeEEEeCCcEEEEEccCCCChHHHHhhhcCCCCCCeeEEEEEEcCccCCh-hcccceeeEeecCCCCCCCCcH
Q 000997 841 RLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ-ETFARISGYCEQNDIHSPGLTV 919 (1194)
Q Consensus 841 ~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~-~~~~~~~gyv~Q~~~~~~~lTv 919 (1194)
++.+|+|+|+++++||++||+|||||||||||++|+|..+ +.+|+|.++|.++.. ...++.+|||+|++.++|.+||
T Consensus 16 ~~~~l~~vsl~i~~Ge~~~llG~sGsGKSTLLr~iaGl~~--p~~G~I~~~g~~i~~~~~~~r~ig~v~Q~~~lfp~~tv 93 (356)
T PRK11650 16 KTQVIKGIDLDVADGEFIVLVGPSGCGKSTLLRMVAGLER--ITSGEIWIGGRVVNELEPADRDIAMVFQNYALYPHMSV 93 (356)
T ss_pred CCEEEeeeeEEEcCCCEEEEECCCCCcHHHHHHHHHCCCC--CCceEEEECCEECCCCCHHHCCEEEEeCCccccCCCCH
Confidence 4579999999999999999999999999999999999876 568999999987643 2234789999999999999999
Q ss_pred HHHHHHHhhhcCCCcCcHHHHHHHHHHHHHHcCCCcccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCC
Q 000997 920 LESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSGL 999 (1194)
Q Consensus 920 ~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEPTsgL 999 (1194)
+||+.|+...+ ..+..+..+.++++++.++|.+..+..+ .+|||||||||+|||||+.+|+||+||||||+|
T Consensus 94 ~eNi~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----~~LSgGq~QRvalARAL~~~P~llLLDEP~s~L 165 (356)
T PRK11650 94 RENMAYGLKIR---GMPKAEIEERVAEAARILELEPLLDRKP-----RELSGGQRQRVAMGRAIVREPAVFLFDEPLSNL 165 (356)
T ss_pred HHHHHhHHhhc---CCCHHHHHHHHHHHHHHcCChhHhhCCh-----hhCCHHHHHHHHHHHHHhcCCCEEEEeCCcccC
Confidence 99999986543 2344455567899999999988877654 589999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCeEEEEccCcEEEEeCCCC
Q 000997 1000 DARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLG 1055 (1194)
Q Consensus 1000 D~~~~~~i~~~l~~l~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~~ 1055 (1194)
|+.++..+.+.|+++.++ |.|+|++|||+. ++...+|++++|. +|+++..|++.
T Consensus 166 D~~~r~~l~~~l~~l~~~~g~tii~vTHd~~-ea~~l~D~i~vl~-~G~i~~~g~~~ 220 (356)
T PRK11650 166 DAKLRVQMRLEIQRLHRRLKTTSLYVTHDQV-EAMTLADRVVVMN-GGVAEQIGTPV 220 (356)
T ss_pred CHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEe-CCEEEEECCHH
Confidence 999999999999999765 999999999986 6888999999998 58999999864
No 83
>TIGR03265 PhnT2 putative 2-aminoethylphosphonate ABC transporter, ATP-binding protein. This ABC transporter ATP-binding protein is found in a number of genomes in operon-like contexts strongly suggesting a substrate specificity for 2-aminoethylphosphonate (2-AEP). The characterized PhnSTUV system is absent in the genomes in which this system is found. These genomes encode systems for the catabolism of 2-AEP, making the need for a 2-AEP-specific transporter likely.
Probab=100.00 E-value=2.2e-38 Score=366.08 Aligned_cols=204 Identities=26% Similarity=0.391 Sum_probs=179.6
Q ss_pred cceEEeeeeeEEEeCCcEEEEEccCCCChHHHHhhhcCCCCCCeeEEEEEEcCccCCh-hcccceeeEeecCCCCCCCCc
Q 000997 840 DRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ-ETFARISGYCEQNDIHSPGLT 918 (1194)
Q Consensus 840 ~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~-~~~~~~~gyv~Q~~~~~~~lT 918 (1194)
+.+.+|+||||++++||+++|+|||||||||||++|+|..+ +.+|+|.++|.++.. ...+|.+|||+|+..++|++|
T Consensus 15 ~~~~~l~~vs~~i~~Ge~~~l~GpsGsGKSTLLr~iaGl~~--p~~G~I~i~g~~~~~~~~~~r~ig~v~Q~~~lfp~~t 92 (353)
T TIGR03265 15 GAFTALKDISLSVKKGEFVCLLGPSGCGKTTLLRIIAGLER--QTAGTIYQGGRDITRLPPQKRDYGIVFQSYALFPNLT 92 (353)
T ss_pred CCeEEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHHCCCC--CCceEEEECCEECCCCCHHHCCEEEEeCCcccCCCCc
Confidence 34679999999999999999999999999999999999876 568999999987643 224578999999999999999
Q ss_pred HHHHHHHHhhhcCCCcCcHHHHHHHHHHHHHHcCCCcccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCC
Q 000997 919 VLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSG 998 (1194)
Q Consensus 919 v~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEPTsg 998 (1194)
|+||+.|+...+ ..+..+..+.++++++.++|.++.+... .+|||||||||+|||||+.+|++|+||||||+
T Consensus 93 v~eNi~~~~~~~---~~~~~~~~~~~~~~l~~l~L~~~~~~~~-----~~LSgGq~QRvaLARaL~~~P~llLLDEP~s~ 164 (353)
T TIGR03265 93 VADNIAYGLKNR---GMGRAEVAERVAELLDLVGLPGSERKYP-----GQLSGGQQQRVALARALATSPGLLLLDEPLSA 164 (353)
T ss_pred HHHHHHHHHHhc---CCCHHHHHHHHHHHHHHcCCCchhhCCh-----hhCCHHHHHHHHHHHHHhcCCCEEEEcCCccc
Confidence 999999986543 2334556678899999999998887653 58999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCeEEEEccCcEEEEeCCCC
Q 000997 999 LDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLG 1055 (1194)
Q Consensus 999 LD~~~~~~i~~~l~~l~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~~ 1055 (1194)
||+.++..+.+.|+++.++ |.|+|++|||++ ++...+|++++|++ |+++..|++.
T Consensus 165 LD~~~r~~l~~~L~~l~~~~~~tvi~vTHd~~-ea~~l~d~i~vl~~-G~i~~~g~~~ 220 (353)
T TIGR03265 165 LDARVREHLRTEIRQLQRRLGVTTIMVTHDQE-EALSMADRIVVMNH-GVIEQVGTPQ 220 (353)
T ss_pred CCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHH-HHHHhCCEEEEEEC-CEEEEEcCHH
Confidence 9999999999999999765 999999999986 67889999999984 7999999863
No 84
>PRK11432 fbpC ferric transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3e-38 Score=364.26 Aligned_cols=204 Identities=25% Similarity=0.394 Sum_probs=179.5
Q ss_pred cceEEeeeeeEEEeCCcEEEEEccCCCChHHHHhhhcCCCCCCeeEEEEEEcCccCChh-cccceeeEeecCCCCCCCCc
Q 000997 840 DRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQE-TFARISGYCEQNDIHSPGLT 918 (1194)
Q Consensus 840 ~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~-~~~~~~gyv~Q~~~~~~~lT 918 (1194)
+++.+|+|+|+++++||+++|+|||||||||||++|+|..+ +.+|+|.++|.++... ..+|.+|||+|+..++|++|
T Consensus 17 ~~~~~l~~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~--p~~G~I~~~g~~i~~~~~~~r~ig~vfQ~~~lfp~~t 94 (351)
T PRK11432 17 GSNTVIDNLNLTIKQGTMVTLLGPSGCGKTTVLRLVAGLEK--PTEGQIFIDGEDVTHRSIQQRDICMVFQSYALFPHMS 94 (351)
T ss_pred CCeEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHHCCCC--CCceEEEECCEECCCCCHHHCCEEEEeCCcccCCCCC
Confidence 34679999999999999999999999999999999999877 5689999999876432 23578999999999999999
Q ss_pred HHHHHHHHhhhcCCCcCcHHHHHHHHHHHHHHcCCCcccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCC
Q 000997 919 VLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSG 998 (1194)
Q Consensus 919 v~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEPTsg 998 (1194)
|+||+.|+...+. ....+.+++++++++.+++.++.+... ..|||||||||+|||||+.+|++|+|||||||
T Consensus 95 v~eNi~~~l~~~~---~~~~~~~~~v~~~l~~~gl~~~~~r~~-----~~LSgGq~QRVaLARaL~~~P~lLLLDEP~s~ 166 (351)
T PRK11432 95 LGENVGYGLKMLG---VPKEERKQRVKEALELVDLAGFEDRYV-----DQISGGQQQRVALARALILKPKVLLFDEPLSN 166 (351)
T ss_pred HHHHHHHHHhHcC---CCHHHHHHHHHHHHHHcCCchhhcCCh-----hhCCHHHHHHHHHHHHHHcCCCEEEEcCCccc
Confidence 9999999875442 334556678899999999998877653 58999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCeEEEEccCcEEEEeCCCC
Q 000997 999 LDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLG 1055 (1194)
Q Consensus 999 LD~~~~~~i~~~l~~l~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~~ 1055 (1194)
||+.++..+.+.|+++.++ |.|+|++|||++ ++.+.+|++++|+ +|+++..|++.
T Consensus 167 LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~-e~~~laD~i~vm~-~G~i~~~g~~~ 222 (351)
T PRK11432 167 LDANLRRSMREKIRELQQQFNITSLYVTHDQS-EAFAVSDTVIVMN-KGKIMQIGSPQ 222 (351)
T ss_pred CCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHH-HHHHhCCEEEEEE-CCEEEEEcCHH
Confidence 9999999999999999765 999999999986 6788899999998 47999999863
No 85
>TIGR01188 drrA daunorubicin resistance ABC transporter ATP-binding subunit. This model describes daunorubicin resistance ABC transporter, ATP binding subunit in bacteria and archaea. This model is restricted in its scope to preferentially recognize the ATP binding subunit associated with effux of the drug, daunorubicin. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. In eukaryotes proteins of similar function include p-gyco proteins, multidrug resistance protein etc.
Probab=100.00 E-value=3.6e-38 Score=359.41 Aligned_cols=203 Identities=27% Similarity=0.378 Sum_probs=176.9
Q ss_pred cceEEeeeeeEEEeCCcEEEEEccCCCChHHHHhhhcCCCCCCeeEEEEEEcCccCCh--hcccceeeEeecCCCCCCCC
Q 000997 840 DRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ--ETFARISGYCEQNDIHSPGL 917 (1194)
Q Consensus 840 ~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~--~~~~~~~gyv~Q~~~~~~~l 917 (1194)
+++.+|+||||++++||++||+||||||||||+++|+|... +.+|+|.++|.++.. ...++.+||++|++.+++.+
T Consensus 4 ~~~~~l~~vs~~i~~Ge~~~l~G~NGaGKSTLl~~l~Gl~~--p~~G~i~~~g~~~~~~~~~~~~~i~~~~q~~~~~~~~ 81 (302)
T TIGR01188 4 GDFKAVDGVNFKVREGEVFGFLGPNGAGKTTTIRMLTTLLR--PTSGTARVAGYDVVREPRKVRRSIGIVPQYASVDEDL 81 (302)
T ss_pred CCeeEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEEcccCHHHHHhhcEEecCCCCCCCCC
Confidence 34679999999999999999999999999999999999876 468999999987642 23456799999999999999
Q ss_pred cHHHHHHHHhhhcCCCcCcHHHHHHHHHHHHHHcCCCcccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCC
Q 000997 918 TVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTS 997 (1194)
Q Consensus 918 Tv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEPTs 997 (1194)
||+||+.|.+.++. ....+..+.++++++.+++.+..+..+ ..|||||||||+||+||+.+|++|+|||||+
T Consensus 82 tv~e~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSgG~~qrv~la~al~~~p~lllLDEPt~ 153 (302)
T TIGR01188 82 TGRENLEMMGRLYG---LPKDEAEERAEELLELFELGEAADRPV-----GTYSGGMRRRLDIAASLIHQPDVLFLDEPTT 153 (302)
T ss_pred cHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCChhHhCCch-----hhCCHHHHHHHHHHHHHhcCCCEEEEeCCCc
Confidence 99999998765542 223344456889999999988777654 5799999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCeEEEEccCcEEEEeCCC
Q 000997 998 GLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1194)
Q Consensus 998 gLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~ 1054 (1194)
|||+.++..+++.|++++++|+|||++||+++ ++.+.||++++|. +|++++.|+.
T Consensus 154 gLD~~~~~~l~~~l~~~~~~g~tvi~~sH~~~-~~~~~~d~v~~l~-~G~i~~~g~~ 208 (302)
T TIGR01188 154 GLDPRTRRAIWDYIRALKEEGVTILLTTHYME-EADKLCDRIAIID-HGRIIAEGTP 208 (302)
T ss_pred CCCHHHHHHHHHHHHHHHhCCCEEEEECCCHH-HHHHhCCEEEEEE-CCEEEEECCH
Confidence 99999999999999999878999999999986 5777899999998 4899999875
No 86
>PRK13536 nodulation factor exporter subunit NodI; Provisional
Probab=100.00 E-value=4.2e-38 Score=361.86 Aligned_cols=204 Identities=26% Similarity=0.361 Sum_probs=177.6
Q ss_pred ccceEEeeeeeEEEeCCcEEEEEccCCCChHHHHhhhcCCCCCCeeEEEEEEcCccCCh--hcccceeeEeecCCCCCCC
Q 000997 839 EDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ--ETFARISGYCEQNDIHSPG 916 (1194)
Q Consensus 839 ~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~--~~~~~~~gyv~Q~~~~~~~ 916 (1194)
++++.+|+||||+|++|+++||+||||||||||+++|+|... +.+|+|.++|.++.. ...++.+||++|++.+++.
T Consensus 51 y~~~~~l~~is~~i~~Gei~gLlGpNGaGKSTLl~~L~Gl~~--p~~G~i~i~G~~~~~~~~~~~~~ig~v~q~~~~~~~ 128 (340)
T PRK13536 51 YGDKAVVNGLSFTVASGECFGLLGPNGAGKSTIARMILGMTS--PDAGKITVLGVPVPARARLARARIGVVPQFDNLDLE 128 (340)
T ss_pred ECCEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCC--CCceEEEECCEECCcchHHHhccEEEEeCCccCCCC
Confidence 345679999999999999999999999999999999999876 468999999988643 2356789999999999999
Q ss_pred CcHHHHHHHHhhhcCCCcCcHHHHHHHHHHHHHHcCCCcccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCC
Q 000997 917 LTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPT 996 (1194)
Q Consensus 917 lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEPT 996 (1194)
+|++|++.|.+.++. ....+..+.++++++.++|.+..+..+ .+||||||||++||+||+.+|++|||||||
T Consensus 129 ~tv~e~l~~~~~~~~---~~~~~~~~~~~~ll~~~~L~~~~~~~~-----~~LS~G~kqrv~lA~aL~~~P~lLiLDEPt 200 (340)
T PRK13536 129 FTVRENLLVFGRYFG---MSTREIEAVIPSLLEFARLESKADARV-----SDLSGGMKRRLTLARALINDPQLLILDEPT 200 (340)
T ss_pred CcHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCCchhhCCCh-----hhCCHHHHHHHHHHHHHhcCCCEEEEECCC
Confidence 999999987665432 222334456778999999988777764 579999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCeEEEEccCcEEEEeCCC
Q 000997 997 SGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1194)
Q Consensus 997 sgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~ 1054 (1194)
+|||+.++..+++.|++++++|+|||++||+++ ++.+.||++++|++ |++++.|++
T Consensus 201 ~gLD~~~r~~l~~~l~~l~~~g~tilisSH~l~-e~~~~~d~i~il~~-G~i~~~g~~ 256 (340)
T PRK13536 201 TGLDPHARHLIWERLRSLLARGKTILLTTHFME-EAERLCDRLCVLEA-GRKIAEGRP 256 (340)
T ss_pred CCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHH-HHHHhCCEEEEEEC-CEEEEEcCH
Confidence 999999999999999999878999999999986 57788999999984 799999986
No 87
>COG1124 DppF ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.1e-38 Score=332.56 Aligned_cols=199 Identities=28% Similarity=0.379 Sum_probs=169.4
Q ss_pred EEeeeeeEEEeCCcEEEEEccCCCChHHHHhhhcCCCCCCeeEEEEEEcCccCChh----cccceeeEeecCCC--CCCC
Q 000997 843 QLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQE----TFARISGYCEQNDI--HSPG 916 (1194)
Q Consensus 843 ~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~----~~~~~~gyv~Q~~~--~~~~ 916 (1194)
.+|+||||++.+||++||+|+||||||||.++|+|... +.+|+|.++|.+.... .+.+.+.+|+||+. +.|.
T Consensus 21 ~~l~~VS~~i~~Ge~lgivGeSGsGKSTL~r~l~Gl~~--p~~G~I~~~G~~~~~~~~~~~~~~~VQmVFQDp~~SLnP~ 98 (252)
T COG1124 21 HALNNVSLEIERGETLGIVGESGSGKSTLARLLAGLEK--PSSGSILLDGKPLAPKKRAKAFYRPVQMVFQDPYSSLNPR 98 (252)
T ss_pred hhhcceeEEecCCCEEEEEcCCCCCHHHHHHHHhcccC--CCCceEEECCcccCccccchhhccceeEEecCCccccCcc
Confidence 59999999999999999999999999999999999887 4689999999875432 46788999999975 5689
Q ss_pred CcHHHHHHHHhhhcCCCcCcHHHHHHHHHHHHHHcCCCcc-cCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCC
Q 000997 917 LTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSL-SGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEP 995 (1194)
Q Consensus 917 lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~-~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEP 995 (1194)
.||++.|.-.... ....+.++ ++.++++.+||.+- .+.. +.+||||||||+||||||+.+|++|+||||
T Consensus 99 ~tv~~~l~Epl~~---~~~~~~~~--~i~~~L~~VgL~~~~l~R~-----P~eLSGGQ~QRiaIARAL~~~PklLIlDEp 168 (252)
T COG1124 99 RTVGRILSEPLRP---HGLSKSQQ--RIAELLDQVGLPPSFLDRR-----PHELSGGQRQRIAIARALIPEPKLLILDEP 168 (252)
T ss_pred hhHHHHHhhhhcc---CCccHHHH--HHHHHHHHcCCCHHHHhcC-----chhcChhHHHHHHHHHHhccCCCEEEecCc
Confidence 9999988755432 22333333 38899999999653 3332 358999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCeEEEEccCcEEEEeCCCC
Q 000997 996 TSGLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLG 1055 (1194)
Q Consensus 996 TsgLD~~~~~~i~~~l~~l~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~~ 1055 (1194)
||+||+..++.|+++|.++.++ |.|.|+++||.+. +...|||++||++ |+++..+|.+
T Consensus 169 tSaLD~siQa~IlnlL~~l~~~~~lt~l~IsHdl~~-v~~~cdRi~Vm~~-G~ivE~~~~~ 227 (252)
T COG1124 169 TSALDVSVQAQILNLLLELKKERGLTYLFISHDLAL-VEHMCDRIAVMDN-GQIVEIGPTE 227 (252)
T ss_pred hhhhcHHHHHHHHHHHHHHHHhcCceEEEEeCcHHH-HHHHhhheeeeeC-CeEEEeechh
Confidence 9999999999999999999764 8899999999874 7778999999985 8999999864
No 88
>TIGR03265 PhnT2 putative 2-aminoethylphosphonate ABC transporter, ATP-binding protein. This ABC transporter ATP-binding protein is found in a number of genomes in operon-like contexts strongly suggesting a substrate specificity for 2-aminoethylphosphonate (2-AEP). The characterized PhnSTUV system is absent in the genomes in which this system is found. These genomes encode systems for the catabolism of 2-AEP, making the need for a 2-AEP-specific transporter likely.
Probab=100.00 E-value=7.7e-38 Score=361.54 Aligned_cols=206 Identities=25% Similarity=0.394 Sum_probs=178.6
Q ss_pred eeeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCceeeEEEECCccCCCCCC-CceEEEEecCCCCCCCCCH
Q 000997 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVP-PRTSAYVSQQDWQVAEMTV 226 (1194)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lTV 226 (1194)
+.+|+|+|+++++|++++|+|||||||||||++|+|+.+|+ +|+|.++|.++....+ +|.++||+|+..+||++||
T Consensus 17 ~~~l~~vs~~i~~Ge~~~l~GpsGsGKSTLLr~iaGl~~p~---~G~I~i~g~~~~~~~~~~r~ig~v~Q~~~lfp~~tv 93 (353)
T TIGR03265 17 FTALKDISLSVKKGEFVCLLGPSGCGKTTLLRIIAGLERQT---AGTIYQGGRDITRLPPQKRDYGIVFQSYALFPNLTV 93 (353)
T ss_pred eEEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHHCCCCCC---ceEEEECCEECCCCCHHHCCEEEEeCCcccCCCCcH
Confidence 35899999999999999999999999999999999999876 9999999998765443 4779999999999999999
Q ss_pred HHHHHHhhhccCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhccCcchhHHHHHHHHHhCCcccccccccCccCCC
Q 000997 227 RETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEMLKG 306 (1194)
Q Consensus 227 ~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~k~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~ 306 (1194)
+||+.|+.+.++... .+...+++++++.+||++..|..+ ..
T Consensus 94 ~eNi~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~l~L~~~~~~~~-----~~ 134 (353)
T TIGR03265 94 ADNIAYGLKNRGMGR----------------------------------AEVAERVAELLDLVGLPGSERKYP-----GQ 134 (353)
T ss_pred HHHHHHHHHhcCCCH----------------------------------HHHHHHHHHHHHHcCCCchhhCCh-----hh
Confidence 999999765322100 011235788999999998877655 46
Q ss_pred CChhhhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEcCCeE
Q 000997 307 ISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEGQI 386 (1194)
Q Consensus 307 LSGGqkqRvsia~al~~~~~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~~G~i 386 (1194)
|||||||||+|||||+.+|+++|||||+++||..++.++.+.|+++.+..+ ++++.++|+..++..++|+|++|++|++
T Consensus 135 LSgGq~QRvaLARaL~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~~-~tvi~vTHd~~ea~~l~d~i~vl~~G~i 213 (353)
T TIGR03265 135 LSGGQQQRVALARALATSPGLLLLDEPLSALDARVREHLRTEIRQLQRRLG-VTTIMVTHDQEEALSMADRIVVMNHGVI 213 (353)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcC-CEEEEEcCCHHHHHHhCCEEEEEECCEE
Confidence 999999999999999999999999999999999999999999999876544 4556688999999999999999999999
Q ss_pred EEecChhhHH
Q 000997 387 VYQGPRVSVL 396 (1194)
Q Consensus 387 v~~G~~~~~~ 396 (1194)
++.|+++++.
T Consensus 214 ~~~g~~~~~~ 223 (353)
T TIGR03265 214 EQVGTPQEIY 223 (353)
T ss_pred EEEcCHHHHH
Confidence 9999998874
No 89
>TIGR03258 PhnT 2-aminoethylphosphonate ABC transport system, ATP-binding component PhnT. This ATP-binding component of an ABC transport system is found in Salmonella and Burkholderia lineages in the vicinity of enzymes for the breakdown of 2-aminoethylphosphonate.
Probab=100.00 E-value=8.6e-38 Score=361.47 Aligned_cols=207 Identities=25% Similarity=0.347 Sum_probs=179.6
Q ss_pred eeeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCcee--eEEEECCccCCCCCC-CceEEEEecCCCCCCCC
Q 000997 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVS--GKITYNGHGFKEFVP-PRTSAYVSQQDWQVAEM 224 (1194)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~--G~i~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~l 224 (1194)
..+|+|+|++|++|++++|+|||||||||||++|+|+++++ + |+|.++|.++....+ ++.++||+|++.+|+++
T Consensus 18 ~~~l~~vsl~i~~Ge~~~llGpsGsGKSTLLr~iaGl~~p~---~~~G~i~~~g~~~~~~~~~~r~ig~vfQ~~~l~p~~ 94 (362)
T TIGR03258 18 NTVLDDLSLEIEAGELLALIGKSGCGKTTLLRAIAGFVKAA---GLTGRIAIADRDLTHAPPHKRGLALLFQNYALFPHL 94 (362)
T ss_pred eEEEeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CCCEEEEECCEECCCCCHHHCCEEEEECCcccCCCC
Confidence 35999999999999999999999999999999999999876 7 999999998765433 46799999999999999
Q ss_pred CHHHHHHHhhhccCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhccCcchhHHHHHHHHHhCCcccccccccCccC
Q 000997 225 TVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEML 304 (1194)
Q Consensus 225 TV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~k~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~ 304 (1194)
||+|||.|+.+..+... .+...+++++++.+||++..|+.+
T Consensus 95 tv~enl~~~l~~~~~~~----------------------------------~~~~~~v~~~l~~~gL~~~~~~~~----- 135 (362)
T TIGR03258 95 KVEDNVAFGLRAQKMPK----------------------------------ADIAERVADALKLVGLGDAAAHLP----- 135 (362)
T ss_pred cHHHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHhcCCCchhhCCh-----
Confidence 99999999765432110 011234788999999998887765
Q ss_pred CCCChhhhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEcCC
Q 000997 305 KGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEG 384 (1194)
Q Consensus 305 ~~LSGGqkqRvsia~al~~~~~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~~G 384 (1194)
+.|||||||||+|||||+.+|++|+|||||+|||+.++.++.+.|+++.+..++++++.++|+..++..++|+|++|++|
T Consensus 136 ~~LSgGq~QRvaLARAL~~~P~llLLDEP~s~LD~~~r~~l~~~l~~l~~~~~g~til~vTHd~~ea~~l~dri~vl~~G 215 (362)
T TIGR03258 136 AQLSGGMQQRIAIARAIAIEPDVLLLDEPLSALDANIRANMREEIAALHEELPELTILCVTHDQDDALTLADKAGIMKDG 215 (362)
T ss_pred hhCCHHHHHHHHHHHHHhcCCCEEEEcCccccCCHHHHHHHHHHHHHHHHhCCCCEEEEEeCCHHHHHHhCCEEEEEECC
Confidence 46999999999999999999999999999999999999999999999876542456677889999999999999999999
Q ss_pred eEEEecChhhHH
Q 000997 385 QIVYQGPRVSVL 396 (1194)
Q Consensus 385 ~iv~~G~~~~~~ 396 (1194)
+++..|+++++.
T Consensus 216 ~i~~~g~~~~~~ 227 (362)
T TIGR03258 216 RLAAHGEPQALY 227 (362)
T ss_pred EEEEEcCHHHHH
Confidence 999999998874
No 90
>TIGR03258 PhnT 2-aminoethylphosphonate ABC transport system, ATP-binding component PhnT. This ATP-binding component of an ABC transport system is found in Salmonella and Burkholderia lineages in the vicinity of enzymes for the breakdown of 2-aminoethylphosphonate.
Probab=100.00 E-value=5.2e-38 Score=363.27 Aligned_cols=204 Identities=27% Similarity=0.343 Sum_probs=178.7
Q ss_pred cceEEeeeeeEEEeCCcEEEEEccCCCChHHHHhhhcCCCCCCeeE--EEEEEcCccCCh-hcccceeeEeecCCCCCCC
Q 000997 840 DRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIE--GDIYISGYPKRQ-ETFARISGYCEQNDIHSPG 916 (1194)
Q Consensus 840 ~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~--G~i~i~g~~~~~-~~~~~~~gyv~Q~~~~~~~ 916 (1194)
++..+|+|+|+++++||+++|+|||||||||||++|+|..+ +.+ |+|.++|.++.. ...++.+|||+|+..++|.
T Consensus 16 ~~~~~l~~vsl~i~~Ge~~~llGpsGsGKSTLLr~iaGl~~--p~~~~G~i~~~g~~~~~~~~~~r~ig~vfQ~~~l~p~ 93 (362)
T TIGR03258 16 GANTVLDDLSLEIEAGELLALIGKSGCGKTTLLRAIAGFVK--AAGLTGRIAIADRDLTHAPPHKRGLALLFQNYALFPH 93 (362)
T ss_pred CCeEEEeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCCCEEEEECCEECCCCCHHHCCEEEEECCcccCCC
Confidence 34579999999999999999999999999999999999876 457 999999987643 2235779999999999999
Q ss_pred CcHHHHHHHHhhhcCCCcCcHHHHHHHHHHHHHHcCCCcccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCC
Q 000997 917 LTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPT 996 (1194)
Q Consensus 917 lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEPT 996 (1194)
+||+||+.|+...+ ..+..+.+++++++++.++|.+..+..+ .+|||||||||+|||||+.+|++|+|||||
T Consensus 94 ~tv~enl~~~l~~~---~~~~~~~~~~v~~~l~~~gL~~~~~~~~-----~~LSgGq~QRvaLARAL~~~P~llLLDEP~ 165 (362)
T TIGR03258 94 LKVEDNVAFGLRAQ---KMPKADIAERVADALKLVGLGDAAAHLP-----AQLSGGMQQRIAIARAIAIEPDVLLLDEPL 165 (362)
T ss_pred CcHHHHHHHHHHHc---CCCHHHHHHHHHHHHHhcCCCchhhCCh-----hhCCHHHHHHHHHHHHHhcCCCEEEEcCcc
Confidence 99999999986543 2344555667899999999998887754 589999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHhC--CCEEEEEecCCcHHHHHhcCeEEEEccCcEEEEeCCCC
Q 000997 997 SGLDARAAAIVMRTVRNIVNT--GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLG 1055 (1194)
Q Consensus 997 sgLD~~~~~~i~~~l~~l~~~--g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~~ 1055 (1194)
+|||+.++..+.+.|+++.++ |.|+|++|||++ ++...+|++++|+ +|+++..|++.
T Consensus 166 s~LD~~~r~~l~~~l~~l~~~~~g~til~vTHd~~-ea~~l~dri~vl~-~G~i~~~g~~~ 224 (362)
T TIGR03258 166 SALDANIRANMREEIAALHEELPELTILCVTHDQD-DALTLADKAGIMK-DGRLAAHGEPQ 224 (362)
T ss_pred ccCCHHHHHHHHHHHHHHHHhCCCCEEEEEeCCHH-HHHHhCCEEEEEE-CCEEEEEcCHH
Confidence 999999999999999999876 899999999986 5778899999998 58999999863
No 91
>COG1122 CbiO ABC-type cobalt transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.6e-38 Score=340.47 Aligned_cols=201 Identities=26% Similarity=0.376 Sum_probs=178.7
Q ss_pred eEEeeeeeEEEeCCcEEEEEccCCCChHHHHhhhcCCCCCCeeEEEEEEcCccCC----hhcccceeeEeecCCCC-CCC
Q 000997 842 LQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKR----QETFARISGYCEQNDIH-SPG 916 (1194)
Q Consensus 842 ~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~----~~~~~~~~gyv~Q~~~~-~~~ 916 (1194)
..+|+|+|+++++|+.++|+|+||||||||+++|+|... +.+|.|.++|.+.. ...+++.+|||+|++.. +..
T Consensus 17 ~~~l~~v~~~i~~Ge~~~i~G~nGsGKSTL~~~l~GLl~--p~~G~v~~~g~~~~~~~~~~~~~~~vG~VfQnpd~q~~~ 94 (235)
T COG1122 17 KAALKDVSLEIEKGERVLLIGPNGSGKSTLLKLLNGLLK--PTSGEVLVDGLDTSSEKSLLELRQKVGLVFQNPDDQLFG 94 (235)
T ss_pred ceeeeeeEEEECCCCEEEEECCCCCCHHHHHHHHcCcCc--CCCCEEEECCeeccchhhHHHhhcceEEEEECccccccc
Confidence 589999999999999999999999999999999999877 46799999999854 45678899999999754 456
Q ss_pred CcHHHHHHHHhhhcCCCcCcHHHHHHHHHHHHHHcCCCcccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCC
Q 000997 917 LTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPT 996 (1194)
Q Consensus 917 lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEPT 996 (1194)
-||.|.+.|+.... ..+.++.+++++++++.+++.++++.. +..|||||||||+||.+|+.+|++|+|||||
T Consensus 95 ~tV~~evafg~~n~---g~~~~e~~~rv~~~l~~vgl~~~~~r~-----p~~LSGGqkqRvaIA~vLa~~P~iliLDEPt 166 (235)
T COG1122 95 PTVEDEVAFGLENL---GLPREEIEERVAEALELVGLEELLDRP-----PFNLSGGQKQRVAIAGVLAMGPEILLLDEPT 166 (235)
T ss_pred CcHHHHHhhchhhc---CCCHHHHHHHHHHHHHHcCchhhccCC-----ccccCCcceeeHHhhHHHHcCCCEEEEcCCC
Confidence 79999999987533 345566788999999999999997764 3689999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCeEEEEccCcEEEEeCCC
Q 000997 997 SGLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1194)
Q Consensus 997 sgLD~~~~~~i~~~l~~l~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~ 1054 (1194)
||||+.++..+++.++++..+ |.|||++|||.+ .+...+|++++|++ |+++++|++
T Consensus 167 a~LD~~~~~~l~~~l~~L~~~~~~tii~~tHd~~-~~~~~ad~v~vl~~-G~i~~~g~p 223 (235)
T COG1122 167 AGLDPKGRRELLELLKKLKEEGGKTIIIVTHDLE-LVLEYADRVVVLDD-GKILADGDP 223 (235)
T ss_pred CCCCHHHHHHHHHHHHHHHhcCCCeEEEEeCcHH-HHHhhCCEEEEEEC-CEEeecCCH
Confidence 999999999999999999877 799999999986 57778999999985 899999985
No 92
>COG3840 ThiQ ABC-type thiamine transport system, ATPase component [Coenzyme metabolism]
Probab=100.00 E-value=2.3e-38 Score=312.33 Aligned_cols=196 Identities=28% Similarity=0.374 Sum_probs=172.2
Q ss_pred eeeEEEeCCcEEEEEccCCCChHHHHhhhcCCCCCCeeEEEEEEcCccCCh-hcccceeeEeecCCCCCCCCcHHHHHHH
Q 000997 847 NVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ-ETFARISGYCEQNDIHSPGLTVLESLLF 925 (1194)
Q Consensus 847 ~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~-~~~~~~~gyv~Q~~~~~~~lTv~e~l~f 925 (1194)
..++.|.+||++||+||||||||||||+|+|... +.+|+|.|||.+... ....|-++.++|+..+|..+||.+|+-+
T Consensus 17 ~fdl~v~~ge~vAi~GpSGaGKSTLLnLIAGF~~--P~~G~i~i~g~d~t~~~P~~RPVSmlFQEnNLFaHLtV~qNigL 94 (231)
T COG3840 17 RFDLTVPAGEIVAILGPSGAGKSTLLNLIAGFET--PASGEILINGVDHTASPPAERPVSMLFQENNLFAHLTVAQNIGL 94 (231)
T ss_pred EEEEeecCCcEEEEECCCCccHHHHHHHHHhccC--CCCceEEEcCeecCcCCcccCChhhhhhccccchhhhhhhhhcc
Confidence 4567889999999999999999999999999987 568999999998654 3456778999999999999999999988
Q ss_pred HhhhcCCCcCcHHHHHHHHHHHHHHcCCCcccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHH
Q 000997 926 SAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSGLDARAAA 1005 (1194)
Q Consensus 926 ~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEPTsgLD~~~~~ 1005 (1194)
+..-.+ .. ..+.++.++.++..+||.++.+.+. .+|||||||||++||+|+++-+||+||||+|.|||.-+.
T Consensus 95 Gl~P~L--kL-~a~~r~~v~~aa~~vGl~~~~~RLP-----~~LSGGqRQRvALARclvR~~PilLLDEPFsALdP~LR~ 166 (231)
T COG3840 95 GLSPGL--KL-NAEQREKVEAAAAQVGLAGFLKRLP-----GELSGGQRQRVALARCLVREQPILLLDEPFSALDPALRA 166 (231)
T ss_pred cCCccc--cc-CHHHHHHHHHHHHHhChhhHhhhCc-----cccCchHHHHHHHHHHHhccCCeEEecCchhhcCHHHHH
Confidence 643211 11 2445677899999999999988764 489999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHh-CCCEEEEEecCCcHHHHHhcCeEEEEccCcEEEEeCCC
Q 000997 1006 IVMRTVRNIVN-TGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1194)
Q Consensus 1006 ~i~~~l~~l~~-~g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~ 1054 (1194)
.+..++.++++ ++.|++++||+|+ +....+|+++++++ |+|.+.|+.
T Consensus 167 eMl~Lv~~l~~E~~~TllmVTH~~~-Da~~ia~~~~fl~~-Gri~~~g~~ 214 (231)
T COG3840 167 EMLALVSQLCDERKMTLLMVTHHPE-DAARIADRVVFLDN-GRIAAQGST 214 (231)
T ss_pred HHHHHHHHHHHhhCCEEEEEeCCHH-HHHHhhhceEEEeC-CEEEeeccH
Confidence 99999999975 5999999999998 78899999999985 899999985
No 93
>PRK11650 ugpC glycerol-3-phosphate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.2e-38 Score=363.35 Aligned_cols=206 Identities=27% Similarity=0.366 Sum_probs=178.5
Q ss_pred eeeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCceeeEEEECCccCCCCCC-CceEEEEecCCCCCCCCCH
Q 000997 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVP-PRTSAYVSQQDWQVAEMTV 226 (1194)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lTV 226 (1194)
+.+|+|+|+++++|++++|+|||||||||||++|+|..+++ +|+|.++|.++....+ ++.++||+|++.+||++||
T Consensus 17 ~~~l~~vsl~i~~Ge~~~llG~sGsGKSTLLr~iaGl~~p~---~G~I~~~g~~i~~~~~~~r~ig~v~Q~~~lfp~~tv 93 (356)
T PRK11650 17 TQVIKGIDLDVADGEFIVLVGPSGCGKSTLLRMVAGLERIT---SGEIWIGGRVVNELEPADRDIAMVFQNYALYPHMSV 93 (356)
T ss_pred CEEEeeeeEEEcCCCEEEEECCCCCcHHHHHHHHHCCCCCC---ceEEEECCEECCCCCHHHCCEEEEeCCccccCCCCH
Confidence 36999999999999999999999999999999999998876 9999999998865443 4789999999999999999
Q ss_pred HHHHHHhhhccCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhccCcchhHHHHHHHHHhCCcccccccccCccCCC
Q 000997 227 RETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEMLKG 306 (1194)
Q Consensus 227 ~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~k~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~ 306 (1194)
+||+.|+.+.++... .+...+++++++.+||++..+..+ +.
T Consensus 94 ~eNi~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~gL~~~~~~~~-----~~ 134 (356)
T PRK11650 94 RENMAYGLKIRGMPK----------------------------------AEIEERVAEAARILELEPLLDRKP-----RE 134 (356)
T ss_pred HHHHHhHHhhcCCCH----------------------------------HHHHHHHHHHHHHcCChhHhhCCh-----hh
Confidence 999999765322100 011234788999999998777655 46
Q ss_pred CChhhhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEcCCeE
Q 000997 307 ISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEGQI 386 (1194)
Q Consensus 307 LSGGqkqRvsia~al~~~~~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~~G~i 386 (1194)
|||||||||+|||||+.+|++|+|||||++||+.++..+.+.|+++.+.. +++++.++|+..++..++|+|++|++|++
T Consensus 135 LSgGq~QRvalARAL~~~P~llLLDEP~s~LD~~~r~~l~~~l~~l~~~~-g~tii~vTHd~~ea~~l~D~i~vl~~G~i 213 (356)
T PRK11650 135 LSGGQRQRVAMGRAIVREPAVFLFDEPLSNLDAKLRVQMRLEIQRLHRRL-KTTSLYVTHDQVEAMTLADRVVVMNGGVA 213 (356)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhc-CCEEEEEeCCHHHHHHhCCEEEEEeCCEE
Confidence 99999999999999999999999999999999999999999999987644 45566688999999999999999999999
Q ss_pred EEecChhhHH
Q 000997 387 VYQGPRVSVL 396 (1194)
Q Consensus 387 v~~G~~~~~~ 396 (1194)
+..|+++++.
T Consensus 214 ~~~g~~~~~~ 223 (356)
T PRK11650 214 EQIGTPVEVY 223 (356)
T ss_pred EEECCHHHHH
Confidence 9999998873
No 94
>TIGR01186 proV glycine betaine/L-proline transport ATP binding subunit. This model describes the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. Functionally, this transport system is involved in osmoregulation. Under conditions of stress, the organism recruits these transport system to accumulate glycine betaine and other solutes which offer osmo-protection. It has been demonstrated that glycine betaine uptake is accompanied by symport with sodium ions. The locus has been named variously as proU or opuA. A gene library from L.lact
Probab=100.00 E-value=9.1e-38 Score=360.01 Aligned_cols=204 Identities=24% Similarity=0.312 Sum_probs=178.3
Q ss_pred cceEEeeeeeEEEeCCcEEEEEccCCCChHHHHhhhcCCCCCCeeEEEEEEcCccCCh---hcc----cceeeEeecCCC
Q 000997 840 DRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ---ETF----ARISGYCEQNDI 912 (1194)
Q Consensus 840 ~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~---~~~----~~~~gyv~Q~~~ 912 (1194)
+.+.+|+|+||+|++||+++|+|||||||||||++|+|..+ +.+|+|.++|.++.. ..+ ++.+|||+|++.
T Consensus 4 ~~~~~l~~vs~~i~~Gei~~l~G~sGsGKSTLLr~L~Gl~~--p~~G~I~i~G~~i~~~~~~~~~~~rr~~i~~v~Q~~~ 81 (363)
T TIGR01186 4 GGKKGVNDADLAIAKGEIFVIMGLSGSGKSTTVRMLNRLIE--PTAGQIFIDGENIMKQSPVELREVRRKKIGMVFQQFA 81 (363)
T ss_pred CCceeEEeeEEEEcCCCEEEEECCCCChHHHHHHHHhCCCC--CCceEEEECCEECCcCCHHHHHHHHhCcEEEEECCCc
Confidence 45679999999999999999999999999999999999877 568999999988653 222 568999999999
Q ss_pred CCCCCcHHHHHHHHhhhcCCCcCcHHHHHHHHHHHHHHcCCCcccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEE
Q 000997 913 HSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFM 992 (1194)
Q Consensus 913 ~~~~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illL 992 (1194)
++|.+||+||+.|...+. ....++..+++.++++.++|.+..+... ..|||||||||+|||||+.+|+||||
T Consensus 82 l~~~~TV~eNi~~~~~~~---~~~~~~~~~~~~~~l~~vgL~~~~~~~p-----~~LSGGq~QRV~lARAL~~~p~iLLl 153 (363)
T TIGR01186 82 LFPHMTILQNTSLGPELL---GWPEQERKEKALELLKLVGLEEYEHRYP-----DELSGGMQQRVGLARALAAEPDILLM 153 (363)
T ss_pred CCCCCCHHHHHHHHHHHc---CCCHHHHHHHHHHHHHhcCCchhhhCCh-----hhCCHHHHHHHHHHHHHhcCCCEEEE
Confidence 999999999999976543 2344556677899999999987777653 58999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCeEEEEccCcEEEEeCCCC
Q 000997 993 DEPTSGLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLG 1055 (1194)
Q Consensus 993 DEPTsgLD~~~~~~i~~~l~~l~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~~ 1055 (1194)
||||++||+.++..+++.++++.++ |+|||++||+++ ++...+|++++|. +|+++..|++.
T Consensus 154 DEP~saLD~~~r~~l~~~l~~l~~~~~~Tii~vTHd~~-ea~~~~drI~vl~-~G~iv~~g~~~ 215 (363)
T TIGR01186 154 DEAFSALDPLIRDSMQDELKKLQATLQKTIVFITHDLD-EAIRIGDRIVIMK-AGEIVQVGTPD 215 (363)
T ss_pred eCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEe-CCEEEeeCCHH
Confidence 9999999999999999999999754 899999999976 5778899999998 57999998753
No 95
>KOG0058 consensus Peptide exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=2.2e-38 Score=373.39 Aligned_cols=214 Identities=25% Similarity=0.415 Sum_probs=177.0
Q ss_pred cCCCcceeeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCceeeEEEECCccCCCCCC---CceEEEEecCC
Q 000997 142 RGNRSKLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVP---PRTSAYVSQQD 218 (1194)
Q Consensus 142 ~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~~~---~~~~~yv~Q~d 218 (1194)
++.+++.+||+|+|++|+|||.|||+|||||||||+.+.|-.+++|. +|+|++||+|+.+..+ ++.+|+|.|+|
T Consensus 475 YP~Rp~~~Vlk~lsfti~pGe~vALVGPSGsGKSTiasLL~rfY~Pt---sG~IllDG~~i~~~~~~~lr~~Ig~V~QEP 551 (716)
T KOG0058|consen 475 YPTRPDVPVLKNLSFTIRPGEVVALVGPSGSGKSTIASLLLRFYDPT---SGRILLDGVPISDINHKYLRRKIGLVGQEP 551 (716)
T ss_pred cCCCCCchhhcCceeeeCCCCEEEEECCCCCCHHHHHHHHHHhcCCC---CCeEEECCeehhhcCHHHHHHHeeeeeccc
Confidence 34456778999999999999999999999999999999999999887 9999999999988865 68999999999
Q ss_pred CCCCCCCHHHHHHHhhhccCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhccCcchhHHHHHHHHHhCCccccccc
Q 000997 219 WQVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTL 298 (1194)
Q Consensus 219 ~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~k~~~~~~~~~~~~~~~~l~~lgL~~~~dt~ 298 (1194)
.+|.. ||+|||.|+.. ....+.+..+++.. + ..+. +.++++.+||.
T Consensus 552 vLFs~-sI~eNI~YG~~----~~t~e~i~~AAk~A---N-----------------------ah~F---I~~~p~gY~T~ 597 (716)
T KOG0058|consen 552 VLFSG-SIRENIAYGLD----NATDEEIEAAAKMA---N-----------------------AHEF---ITNFPDGYNTV 597 (716)
T ss_pred eeecc-cHHHHHhcCCC----CCCHHHHHHHHHHh---C-----------------------hHHH---HHhCccccccc
Confidence 98875 99999999754 11222222222111 0 1122 34689999999
Q ss_pred ccCccCCCCChhhhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeE
Q 000997 299 VGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDV 378 (1194)
Q Consensus 299 vg~~~~~~LSGGqkqRvsia~al~~~~~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~v 378 (1194)
||+++. .||||||||++|||||+.+|.||+|||.||+||+.+...+.+.|.+..+ + .||++|.|.. .+.+.+|+|
T Consensus 598 VGEkG~-qLSGGQKQRIAIARALlr~P~VLILDEATSALDaeSE~lVq~aL~~~~~--~-rTVlvIAHRL-STV~~Ad~I 672 (716)
T KOG0058|consen 598 VGEKGS-QLSGGQKQRIAIARALLRNPRVLILDEATSALDAESEYLVQEALDRLMQ--G-RTVLVIAHRL-STVRHADQI 672 (716)
T ss_pred cCCccc-cccchHHHHHHHHHHHhcCCCEEEEechhhhcchhhHHHHHHHHHHhhc--C-CeEEEEehhh-hHhhhccEE
Confidence 998665 6999999999999999999999999999999999999999999987754 3 4455566655 466889999
Q ss_pred EEEcCCeEEEecChhhHHH
Q 000997 379 ILLSEGQIVYQGPRVSVLD 397 (1194)
Q Consensus 379 ilL~~G~iv~~G~~~~~~~ 397 (1194)
+++++|++++.|+++|+++
T Consensus 673 vvi~~G~V~E~G~h~eLl~ 691 (716)
T KOG0058|consen 673 VVIDKGRVVEMGTHDELLS 691 (716)
T ss_pred EEEcCCeEEecccHHHHhh
Confidence 9999999999999999874
No 96
>cd03259 ABC_Carb_Solutes_like ABC Carbohydrate and Solute Transporters-like subgroup. This family is comprised of proteins involved in the transport of apparently unrelated solutes and proteins specific for di- and oligosaccharides and polyols. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=8.1e-38 Score=339.35 Aligned_cols=200 Identities=31% Similarity=0.433 Sum_probs=169.5
Q ss_pred ceEEeeeeeEEEeCCcEEEEEccCCCChHHHHhhhcCCCCCCeeEEEEEEcCccCCh-hcccceeeEeecCCCCCCCCcH
Q 000997 841 RLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ-ETFARISGYCEQNDIHSPGLTV 919 (1194)
Q Consensus 841 ~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~-~~~~~~~gyv~Q~~~~~~~lTv 919 (1194)
++.+|+|+||++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++.. ...++.++|++|++.+++.+|+
T Consensus 12 ~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--p~~G~i~~~g~~~~~~~~~~~~i~~v~q~~~~~~~~tv 89 (213)
T cd03259 12 SVRALDDLSLTVEPGEFLALLGPSGCGKTTLLRLIAGLER--PDSGEILIDGRDVTGVPPERRNIGMVFQDYALFPHLTV 89 (213)
T ss_pred CeeeecceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCCeEEEECCEEcCcCchhhccEEEEcCchhhccCCcH
Confidence 4579999999999999999999999999999999999876 468999999987643 2234679999999988889999
Q ss_pred HHHHHHHhhhcCCCcCcHHHHHHHHHHHHHHcCCCcccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCC
Q 000997 920 LESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSGL 999 (1194)
Q Consensus 920 ~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEPTsgL 999 (1194)
+||+.+...... .......+.++++++.+++.+..+..+ ..||||||||++||++|+.+|++|+|||||+||
T Consensus 90 ~~~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSgG~~qrl~la~al~~~p~~lllDEPt~~L 161 (213)
T cd03259 90 AENIAFGLKLRG---VPKAEIRARVRELLELVGLEGLLNRYP-----HELSGGQQQRVALARALAREPSLLLLDEPLSAL 161 (213)
T ss_pred HHHHHhHHHHcC---CCHHHHHHHHHHHHHHcCChhhhhcCh-----hhCCHHHHHHHHHHHHHhcCCCEEEEcCCcccC
Confidence 999987653321 223334456788999999987766543 579999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHh-CCCEEEEEecCCcHHHHHhcCeEEEEccCcEEEEeC
Q 000997 1000 DARAAAIVMRTVRNIVN-TGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAG 1052 (1194)
Q Consensus 1000 D~~~~~~i~~~l~~l~~-~g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g 1052 (1194)
|+.++..+++.|+++++ .|+|||+++|+++ .+.+.+|++++|++ |++++.|
T Consensus 162 D~~~~~~l~~~l~~~~~~~~~tii~~sH~~~-~~~~~~d~v~~l~~-G~i~~~g 213 (213)
T cd03259 162 DAKLREELREELKELQRELGITTIYVTHDQE-EALALADRIAVMNE-GRIVQVG 213 (213)
T ss_pred CHHHHHHHHHHHHHHHHHcCCEEEEEecCHH-HHHHhcCEEEEEEC-CEEEecC
Confidence 99999999999999976 4999999999986 46778999999985 7887654
No 97
>PRK10851 sulfate/thiosulfate transporter subunit; Provisional
Probab=100.00 E-value=9e-38 Score=360.98 Aligned_cols=207 Identities=27% Similarity=0.391 Sum_probs=178.2
Q ss_pred cceEEeeeeeEEEeCCcEEEEEccCCCChHHHHhhhcCCCCCCeeEEEEEEcCccCCh-hcccceeeEeecCCCCCCCCc
Q 000997 840 DRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ-ETFARISGYCEQNDIHSPGLT 918 (1194)
Q Consensus 840 ~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~-~~~~~~~gyv~Q~~~~~~~lT 918 (1194)
+++.+|+|+|+++++||+++|+|||||||||||++|+|..+ +.+|+|.++|.++.. ...++.+|||+|++.++|.+|
T Consensus 13 ~~~~~l~~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~--p~~G~I~i~g~~i~~~~~~~r~i~~v~Q~~~l~p~~t 90 (353)
T PRK10851 13 GRTQVLNDISLDIPSGQMVALLGPSGSGKTTLLRIIAGLEH--QTSGHIRFHGTDVSRLHARDRKVGFVFQHYALFRHMT 90 (353)
T ss_pred CCeEEEEEeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEECCCCCHHHCCEEEEecCcccCCCCc
Confidence 34579999999999999999999999999999999999876 468999999987643 223467999999999999999
Q ss_pred HHHHHHHHhhhcCC-CcCcHHHHHHHHHHHHHHcCCCcccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCC
Q 000997 919 VLESLLFSAWLRLP-SEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTS 997 (1194)
Q Consensus 919 v~e~l~f~~~lr~~-~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEPTs 997 (1194)
|+||+.|....+.. ......+..+.++++++.++|.+..+..+ ..|||||||||+|||||+.+|++|+|||||+
T Consensus 91 v~eni~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~-----~~LSgGq~QRvalArAL~~~P~llLLDEP~s 165 (353)
T PRK10851 91 VFDNIAFGLTVLPRRERPNAAAIKAKVTQLLEMVQLAHLADRYP-----AQLSGGQKQRVALARALAVEPQILLLDEPFG 165 (353)
T ss_pred HHHHHHhhhhhcccccCCCHHHHHHHHHHHHHHcCCchhhhCCh-----hhCCHHHHHHHHHHHHHhcCCCEEEEeCCCc
Confidence 99999997653211 12234455667899999999988777653 5899999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCeEEEEccCcEEEEeCCCC
Q 000997 998 GLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLG 1055 (1194)
Q Consensus 998 gLD~~~~~~i~~~l~~l~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~~ 1055 (1194)
|||+.++..+.+.|+++.++ |.|+|++||+++ ++...+|++++|+ .|+++..|++.
T Consensus 166 ~LD~~~r~~l~~~L~~l~~~~g~tii~vTHd~~-ea~~~~Dri~vl~-~G~i~~~g~~~ 222 (353)
T PRK10851 166 ALDAQVRKELRRWLRQLHEELKFTSVFVTHDQE-EAMEVADRVVVMS-QGNIEQAGTPD 222 (353)
T ss_pred cCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEE-CCEEEEEcCHH
Confidence 99999999999999999765 899999999986 5788899999998 58999998753
No 98
>PRK11432 fbpC ferric transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=8.1e-38 Score=360.63 Aligned_cols=206 Identities=25% Similarity=0.376 Sum_probs=178.9
Q ss_pred eeeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCceeeEEEECCccCCCCCC-CceEEEEecCCCCCCCCCH
Q 000997 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVP-PRTSAYVSQQDWQVAEMTV 226 (1194)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lTV 226 (1194)
..+|+|+|+.+++||+++|+|||||||||||++|+|+.+++ +|+|.++|.++....+ ++.++||+|+..+||++||
T Consensus 19 ~~~l~~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~---~G~I~~~g~~i~~~~~~~r~ig~vfQ~~~lfp~~tv 95 (351)
T PRK11432 19 NTVIDNLNLTIKQGTMVTLLGPSGCGKTTVLRLVAGLEKPT---EGQIFIDGEDVTHRSIQQRDICMVFQSYALFPHMSL 95 (351)
T ss_pred eEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHHCCCCCC---ceEEEECCEECCCCCHHHCCEEEEeCCcccCCCCCH
Confidence 45899999999999999999999999999999999999876 9999999998866544 4789999999999999999
Q ss_pred HHHHHHhhhccCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhccCcchhHHHHHHHHHhCCcccccccccCccCCC
Q 000997 227 RETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEMLKG 306 (1194)
Q Consensus 227 ~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~k~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~ 306 (1194)
+||+.|+.+.++... .+...+++++++.+||.+..|..+ +.
T Consensus 96 ~eNi~~~l~~~~~~~----------------------------------~~~~~~v~~~l~~~gl~~~~~r~~-----~~ 136 (351)
T PRK11432 96 GENVGYGLKMLGVPK----------------------------------EERKQRVKEALELVDLAGFEDRYV-----DQ 136 (351)
T ss_pred HHHHHHHHhHcCCCH----------------------------------HHHHHHHHHHHHHcCCchhhcCCh-----hh
Confidence 999999865432110 011235788999999988776554 56
Q ss_pred CChhhhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEcCCeE
Q 000997 307 ISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEGQI 386 (1194)
Q Consensus 307 LSGGqkqRvsia~al~~~~~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~~G~i 386 (1194)
|||||||||+|||||+.+|++|+|||||+|||+.++.++.+.|+++.+..+ ++++.++|+..++..++|+|++|++|++
T Consensus 137 LSgGq~QRVaLARaL~~~P~lLLLDEP~s~LD~~~r~~l~~~l~~l~~~~g-~tii~vTHd~~e~~~laD~i~vm~~G~i 215 (351)
T PRK11432 137 ISGGQQQRVALARALILKPKVLLFDEPLSNLDANLRRSMREKIRELQQQFN-ITSLYVTHDQSEAFAVSDTVIVMNKGKI 215 (351)
T ss_pred CCHHHHHHHHHHHHHHcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcC-CEEEEEcCCHHHHHHhCCEEEEEECCEE
Confidence 999999999999999999999999999999999999999999999876544 4566688999999999999999999999
Q ss_pred EEecChhhHH
Q 000997 387 VYQGPRVSVL 396 (1194)
Q Consensus 387 v~~G~~~~~~ 396 (1194)
+..|+++++.
T Consensus 216 ~~~g~~~~~~ 225 (351)
T PRK11432 216 MQIGSPQELY 225 (351)
T ss_pred EEEcCHHHHH
Confidence 9999998873
No 99
>TIGR00960 3a0501s02 Type II (General) Secretory Pathway (IISP) Family protein.
Probab=100.00 E-value=1.2e-37 Score=338.81 Aligned_cols=194 Identities=25% Similarity=0.324 Sum_probs=166.1
Q ss_pred eEEeeeeeEEEeCCcEEEEEccCCCChHHHHhhhcCCCCCCeeEEEEEEcCccCCh------hcccceeeEeecCCCCCC
Q 000997 842 LQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ------ETFARISGYCEQNDIHSP 915 (1194)
Q Consensus 842 ~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~------~~~~~~~gyv~Q~~~~~~ 915 (1194)
+.+|+|+|+++++||++||+||||||||||+++|+|..+ +.+|+|.++|.++.. ..+++.++|++|++.+++
T Consensus 16 ~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~~~~~~~~~~~~~~i~~~~q~~~~~~ 93 (216)
T TIGR00960 16 QPALDNLNFHITKGEMVFLVGHSGAGKSTFLKLILGIEK--PTRGKIRFNGQDLTRLRGREIPFLRRHIGMVFQDHRLLS 93 (216)
T ss_pred eeEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEehhhcChhHHHHHHHhceEEecCccccc
Confidence 469999999999999999999999999999999999876 468999999987532 124567999999999999
Q ss_pred CCcHHHHHHHHhhhcCCCcCcHHHHHHHHHHHHHHcCCCcccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCC
Q 000997 916 GLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEP 995 (1194)
Q Consensus 916 ~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEP 995 (1194)
.+||+||+.+....+. .......+.++++++.+++.+..+... ..|||||||||+|||||+.+|++|+||||
T Consensus 94 ~~tv~e~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSgG~~qrv~laral~~~p~llllDEP 165 (216)
T TIGR00960 94 DRTVYDNVAFPLRIIG---VPPRDANERVSAALEKVGLEGKAHALP-----MQLSGGEQQRVAIARAIVHKPPLLLADEP 165 (216)
T ss_pred cccHHHHHHHHHHhcC---CCHHHHHHHHHHHHHHcCChhhhhCCh-----hhCCHHHHHHHHHHHHHhcCCCEEEEeCC
Confidence 9999999998754331 222334456889999999987766543 57999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCeEEEEccCcE
Q 000997 996 TSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGE 1047 (1194)
Q Consensus 996 TsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~ 1047 (1194)
|+|||+.++..+.+.|++++++|.|||++||+++ .+...||++++|.+ |+
T Consensus 166 t~~LD~~~~~~l~~~l~~~~~~~~tii~vsH~~~-~~~~~~d~i~~l~~-G~ 215 (216)
T TIGR00960 166 TGNLDPELSRDIMRLFEEFNRRGTTVLVATHDIN-LVETYRHRTLTLSR-GR 215 (216)
T ss_pred CCcCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhCCEEEEEeC-Cc
Confidence 9999999999999999999777999999999986 46678999999985 54
No 100
>PRK13537 nodulation ABC transporter NodI; Provisional
Probab=100.00 E-value=1.9e-37 Score=353.08 Aligned_cols=206 Identities=29% Similarity=0.378 Sum_probs=178.1
Q ss_pred eeeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCceeeEEEECCccCCCCC--CCceEEEEecCCCCCCCCC
Q 000997 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV--PPRTSAYVSQQDWQVAEMT 225 (1194)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~~--~~~~~~yv~Q~d~~~~~lT 225 (1194)
..+|+|||++|++|++++|+||||||||||+++|+|.+.|+ +|+|.++|.++.... .++.+|||+|++.+++.+|
T Consensus 20 ~~~l~~vsl~i~~Gei~gllGpNGaGKSTLl~~l~Gl~~p~---~G~v~i~G~~~~~~~~~~~~~ig~v~q~~~~~~~~t 96 (306)
T PRK13537 20 KLVVDGLSFHVQRGECFGLLGPNGAGKTTTLRMLLGLTHPD---AGSISLCGEPVPSRARHARQRVGVVPQFDNLDPDFT 96 (306)
T ss_pred eEEEecceEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCC---ceEEEECCEecccchHHHHhcEEEEeccCcCCCCCc
Confidence 46999999999999999999999999999999999999876 999999999875432 3467999999999999999
Q ss_pred HHHHHHHhhhccCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhccCcchhHHHHHHHHHhCCcccccccccCccCC
Q 000997 226 VRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEMLK 305 (1194)
Q Consensus 226 V~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~k~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~ 305 (1194)
|+||+.|.++..+... .+...+++.+++.+||.+.+++.++
T Consensus 97 v~e~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~~----- 137 (306)
T PRK13537 97 VRENLLVFGRYFGLSA----------------------------------AAARALVPPLLEFAKLENKADAKVG----- 137 (306)
T ss_pred HHHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCCchHhcCchh-----
Confidence 9999998665432110 0012246788999999988888775
Q ss_pred CCChhhhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEcCCe
Q 000997 306 GISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEGQ 385 (1194)
Q Consensus 306 ~LSGGqkqRvsia~al~~~~~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~~G~ 385 (1194)
+|||||||||+||+||+.+|++|+|||||+|||+.++..+++.|+++++. +++|+.++|..+++.++||+|++|++|+
T Consensus 138 ~LS~G~~qrl~la~aL~~~P~lllLDEPt~gLD~~~~~~l~~~l~~l~~~--g~till~sH~l~e~~~~~d~i~il~~G~ 215 (306)
T PRK13537 138 ELSGGMKRRLTLARALVNDPDVLVLDEPTTGLDPQARHLMWERLRSLLAR--GKTILLTTHFMEEAERLCDRLCVIEEGR 215 (306)
T ss_pred hCCHHHHHHHHHHHHHhCCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHhC--CCEEEEECCCHHHHHHhCCEEEEEECCE
Confidence 59999999999999999999999999999999999999999999998642 4567778899999999999999999999
Q ss_pred EEEecChhhHHH
Q 000997 386 IVYQGPRVSVLD 397 (1194)
Q Consensus 386 iv~~G~~~~~~~ 397 (1194)
+++.|+++++..
T Consensus 216 i~~~g~~~~l~~ 227 (306)
T PRK13537 216 KIAEGAPHALIE 227 (306)
T ss_pred EEEECCHHHHHh
Confidence 999999988754
No 101
>TIGR01257 rim_protein retinal-specific rim ABC transporter. This model describes the photoreceptor protein (rim protein) in eukaryotes. It is the member of ABC transporter superfamily. Rim protein is a membrane glycoprotein which is localized in the photoreceptor outer segment discs. Mutation/s in its genetic loci is implicated in the recessive Stargardt's disease.
Probab=100.00 E-value=8.8e-36 Score=394.72 Aligned_cols=201 Identities=26% Similarity=0.375 Sum_probs=176.3
Q ss_pred ceEEeeeeeEEEeCCcEEEEEccCCCChHHHHhhhcCCCCCCeeEEEEEEcCccCCh--hcccceeeEeecCCCCCCCCc
Q 000997 841 RLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ--ETFARISGYCEQNDIHSPGLT 918 (1194)
Q Consensus 841 ~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~--~~~~~~~gyv~Q~~~~~~~lT 918 (1194)
++.+|+|||+.+++||++||+||||||||||+++|+|... +.+|+|.++|.++.. ...++.+|||+|++.+++.+|
T Consensus 942 ~k~aL~~lsl~I~~Gei~aLLG~NGAGKSTLLkiLaGLl~--PtsG~I~i~G~dI~~~~~~~r~~IG~~pQ~~~L~~~LT 1019 (2272)
T TIGR01257 942 GRPAVDRLNITFYENQITAFLGHNGAGKTTTLSILTGLLP--PTSGTVLVGGKDIETNLDAVRQSLGMCPQHNILFHHLT 1019 (2272)
T ss_pred CceEEEeeEEEEcCCcEEEEECCCCChHHHHHHHHhcCCC--CCceEEEECCEECcchHHHHhhcEEEEecCCcCCCCCC
Confidence 4679999999999999999999999999999999999876 468999999988642 234677999999999999999
Q ss_pred HHHHHHHHhhhcCCCcCcHHHHHHHHHHHHHHcCCCcccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCC
Q 000997 919 VLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSG 998 (1194)
Q Consensus 919 v~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEPTsg 998 (1194)
|+|++.|.+.++. ....+.++.++++++.++|.+..+..+ ++|||||||||+||+||+.+|+||+|||||+|
T Consensus 1020 V~E~L~f~~~lkg---~~~~~~~~~v~~lL~~vgL~~~~~~~~-----~~LSGGqKQRLsLArALi~~PkVLLLDEPTSG 1091 (2272)
T TIGR01257 1020 VAEHILFYAQLKG---RSWEEAQLEMEAMLEDTGLHHKRNEEA-----QDLSGGMQRKLSVAIAFVGDAKVVVLDEPTSG 1091 (2272)
T ss_pred HHHHHHHHHHhcC---CCHHHHHHHHHHHHHHcCCchhhcCCh-----hhCCHHHHHHHHHHHHHHcCCCEEEEECCCcC
Confidence 9999999876653 223344567889999999988877654 58999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCeEEEEccCcEEEEeCCC
Q 000997 999 LDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1194)
Q Consensus 999 LD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~ 1054 (1194)
||+.+++.++++|++++ +|+|||+|||+++ ++...+||+++|++ |+++..|+.
T Consensus 1092 LDp~sr~~l~~lL~~l~-~g~TIIltTHdmd-ea~~laDrI~iL~~-GkL~~~Gs~ 1144 (2272)
T TIGR01257 1092 VDPYSRRSIWDLLLKYR-SGRTIIMSTHHMD-EADLLGDRIAIISQ-GRLYCSGTP 1144 (2272)
T ss_pred CCHHHHHHHHHHHHHHh-CCCEEEEEECCHH-HHHHhCCEEEEEEC-CEEEEecCH
Confidence 99999999999999985 6999999999986 56678999999984 799998875
No 102
>TIGR01288 nodI ATP-binding ABC transporter family nodulation protein NodI. This model does not recognize the highly divergent NodI from Azorhizobium caulinodans.
Probab=100.00 E-value=1.2e-37 Score=355.28 Aligned_cols=203 Identities=27% Similarity=0.370 Sum_probs=174.3
Q ss_pred cceEEeeeeeEEEeCCcEEEEEccCCCChHHHHhhhcCCCCCCeeEEEEEEcCccCCh--hcccceeeEeecCCCCCCCC
Q 000997 840 DRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ--ETFARISGYCEQNDIHSPGL 917 (1194)
Q Consensus 840 ~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~--~~~~~~~gyv~Q~~~~~~~l 917 (1194)
+++.+|+||||++++|+++||+||||||||||+++|+|... +.+|+|.++|.++.. ...++.+||++|++.+++.+
T Consensus 15 ~~~~~l~~vsl~i~~Ge~~~l~G~NGaGKSTLl~~l~Gl~~--p~~G~i~~~g~~~~~~~~~~~~~i~~v~q~~~~~~~~ 92 (303)
T TIGR01288 15 GDKVVVNDLSFTIARGECFGLLGPNGAGKSTIARMLLGMIS--PDRGKITVLGEPVPSRARLARVAIGVVPQFDNLDPEF 92 (303)
T ss_pred CCeEEEcceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEECcccHHHHhhcEEEEeccccCCcCC
Confidence 34679999999999999999999999999999999999876 468999999987532 23456799999999999999
Q ss_pred cHHHHHHHHhhhcCCCcCcHHHHHHHHHHHHHHcCCCcccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCC
Q 000997 918 TVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTS 997 (1194)
Q Consensus 918 Tv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEPTs 997 (1194)
||+||+.+.+.... ....+..+.++++++.+++.+..+..+ ..||||||||++||+||+.+|++|||||||+
T Consensus 93 tv~e~l~~~~~~~~---~~~~~~~~~~~~ll~~~~l~~~~~~~~-----~~LSgG~~qrv~la~al~~~p~lllLDEPt~ 164 (303)
T TIGR01288 93 TVRENLLVFGRYFG---MSTREIEAVIPSLLEFARLESKADVRV-----ALLSGGMKRRLTLARALINDPQLLILDEPTT 164 (303)
T ss_pred cHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHCCChhHhcCch-----hhCCHHHHHHHHHHHHHhcCCCEEEEeCCCc
Confidence 99999987554321 223333456778899999987776654 5799999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCeEEEEccCcEEEEeCCC
Q 000997 998 GLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1194)
Q Consensus 998 gLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~ 1054 (1194)
|||+.++..+++.|++++++|.|||++||+++ ++.+.||++++|+ +|++++.|+.
T Consensus 165 gLD~~~~~~l~~~l~~~~~~g~til~~sH~~~-~~~~~~d~i~~l~-~G~i~~~g~~ 219 (303)
T TIGR01288 165 GLDPHARHLIWERLRSLLARGKTILLTTHFME-EAERLCDRLCVLE-SGRKIAEGRP 219 (303)
T ss_pred CCCHHHHHHHHHHHHHHHhCCCEEEEECCCHH-HHHHhCCEEEEEE-CCEEEEEcCH
Confidence 99999999999999999878999999999986 5777899999998 5799999875
No 103
>COG0411 LivG ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=3.3e-38 Score=329.45 Aligned_cols=214 Identities=28% Similarity=0.391 Sum_probs=184.7
Q ss_pred ccccccccceEEeeeeeEEEeCCcEEEEEccCCCChHHHHhhhcCCCCCCeeEEEEEEcCccCCh----hcccceeeEee
Q 000997 833 KQEGVLEDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ----ETFARISGYCE 908 (1194)
Q Consensus 833 ~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~----~~~~~~~gyv~ 908 (1194)
++..+..+...+++|||+++++||++||+||||||||||+|+|+|..+ +.+|+|.++|.++.. +..+..++.-+
T Consensus 8 ~~l~k~FGGl~Al~~Vsl~v~~Gei~~LIGPNGAGKTTlfNlitG~~~--P~~G~v~~~G~~it~l~p~~iar~Gi~RTF 85 (250)
T COG0411 8 RGLSKRFGGLTAVNDVSLEVRPGEIVGLIGPNGAGKTTLFNLITGFYK--PSSGTVIFRGRDITGLPPHRIARLGIARTF 85 (250)
T ss_pred ccceeecCCEEEEeceeEEEcCCeEEEEECCCCCCceeeeeeeccccc--CCCceEEECCcccCCCCHHHHHhccceeec
Confidence 334445678899999999999999999999999999999999999877 568999999998753 23355688999
Q ss_pred cCCCCCCCCcHHHHHHHHhhhc--------CCCc-CcHHHHHHHHHHHHHHcCCCcccCCcccCCCCCCCCHHHHHHHHH
Q 000997 909 QNDIHSPGLTVLESLLFSAWLR--------LPSE-IELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTI 979 (1194)
Q Consensus 909 Q~~~~~~~lTv~e~l~f~~~lr--------~~~~-~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~i 979 (1194)
|...+|+++||.||++.++..+ .+.. ....+..++..++++.+||.+.++...+ +||+||||||.|
T Consensus 86 Q~~rlF~~lTVlENv~va~~~~~~~~~~l~~~~~~~~e~~~~e~A~~~Le~vgL~~~a~~~A~-----~LsyG~qR~LEI 160 (250)
T COG0411 86 QITRLFPGLTVLENVAVGAHARLGLSGLLGRPRARKEEREARERARELLEFVGLGELADRPAG-----NLSYGQQRRLEI 160 (250)
T ss_pred ccccccCCCcHHHHHHHHhhhhhhhhhhhccccchhhHHHHHHHHHHHHHHcCCchhhcchhh-----cCChhHhHHHHH
Confidence 9999999999999999875533 1111 1234556778899999999999998754 799999999999
Q ss_pred HHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCeEEEEccCcEEEEeCCCC
Q 000997 980 AVELVANPSIVFMDEPTSGLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLG 1055 (1194)
Q Consensus 980 a~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~l~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~~ 1055 (1194)
||||+.+|++|+||||.+||.+.....+.+.|+++.++ |.||++|-||++. ++..||||+||. .|+++..|++.
T Consensus 161 ArALa~~P~lLLLDEPaAGln~~e~~~l~~~i~~i~~~~g~tillIEHdM~~-Vm~l~dri~Vl~-~G~~IAeG~P~ 235 (250)
T COG0411 161 ARALATQPKLLLLDEPAAGLNPEETEELAELIRELRDRGGVTILLIEHDMKL-VMGLADRIVVLN-YGEVIAEGTPE 235 (250)
T ss_pred HHHHhcCCCEEEecCccCCCCHHHHHHHHHHHHHHHhcCCcEEEEEEeccHH-HhhhccEEEecc-CCcCcccCCHH
Confidence 99999999999999999999999999999999999874 7999999999984 889999999998 48999999875
No 104
>cd03293 ABC_NrtD_SsuB_transporters NrtD and SsuB are the ATP-binding subunits of the bacterial ABC-type nitrate and sulfonate transport systems, respectively. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.7e-37 Score=338.48 Aligned_cols=200 Identities=28% Similarity=0.427 Sum_probs=171.7
Q ss_pred eEEeeeeeEEEeCCcEEEEEccCCCChHHHHhhhcCCCCCCeeEEEEEEcCccCChhcccceeeEeecCCCCCCCCcHHH
Q 000997 842 LQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQETFARISGYCEQNDIHSPGLTVLE 921 (1194)
Q Consensus 842 ~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~~~~~~~gyv~Q~~~~~~~lTv~e 921 (1194)
+.+|+|+|+++++|++++|+||||||||||+++|+|..+ +.+|+|.++|.++.. .++.++|++|++.+++.+|++|
T Consensus 17 ~~il~~vs~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~~--~~~~i~~v~q~~~~~~~~tv~e 92 (220)
T cd03293 17 VTALEDISLSVEEGEFVALVGPSGCGKSTLLRIIAGLER--PTSGEVLVDGEPVTG--PGPDRGYVFQQDALLPWLTVLD 92 (220)
T ss_pred eEEEeceeEEEeCCcEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEECcc--ccCcEEEEecccccccCCCHHH
Confidence 579999999999999999999999999999999999876 468999999987642 3567999999998888899999
Q ss_pred HHHHHhhhcCCCcCcHHHHHHHHHHHHHHcCCCcccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCH
Q 000997 922 SLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSGLDA 1001 (1194)
Q Consensus 922 ~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEPTsgLD~ 1001 (1194)
|+.+....+. .......+.++++++.+++.+..+..+ ..||||||||++||+||+.+|++|+|||||+|||+
T Consensus 93 ~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSgG~~qrl~la~al~~~p~lllLDEPt~~LD~ 164 (220)
T cd03293 93 NVALGLELQG---VPKAEARERAEELLELVGLSGFENAYP-----HQLSGGMRQRVALARALAVDPDVLLLDEPFSALDA 164 (220)
T ss_pred HHHHHHHHcC---CCHHHHHHHHHHHHHHcCChhhhhCCc-----ccCCHHHHHHHHHHHHHHcCCCEEEECCCCCCCCH
Confidence 9988754331 222334456889999999987666543 57999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHh-CCCEEEEEecCCcHHHHHhcCeEEEEcc-CcEEEEeCCC
Q 000997 1002 RAAAIVMRTVRNIVN-TGRTIVCTIHQPSIDIFESFDELLFMKR-GGELIYAGPL 1054 (1194)
Q Consensus 1002 ~~~~~i~~~l~~l~~-~g~tvi~~~H~~~~~~~~~~d~~~~l~~-gG~~~~~g~~ 1054 (1194)
.++..+++.|+++.+ .|+|||+++|+++ ++...+|++++|++ +|+++..++.
T Consensus 165 ~~~~~~~~~l~~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~~~G~i~~~~~~ 218 (220)
T cd03293 165 LTREQLQEELLDIWRETGKTVLLVTHDID-EAVFLADRVVVLSARPGRIVAEVEV 218 (220)
T ss_pred HHHHHHHHHHHHHHHHcCCEEEEEecCHH-HHHHhCCEEEEEECCCCEEEEEEEe
Confidence 999999999999865 4899999999986 46678999999985 4899887764
No 105
>PRK09452 potA putrescine/spermidine ABC transporter ATPase protein; Reviewed
Probab=100.00 E-value=1.2e-37 Score=361.38 Aligned_cols=203 Identities=24% Similarity=0.348 Sum_probs=177.9
Q ss_pred ceEEeeeeeEEEeCCcEEEEEccCCCChHHHHhhhcCCCCCCeeEEEEEEcCccCCh-hcccceeeEeecCCCCCCCCcH
Q 000997 841 RLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ-ETFARISGYCEQNDIHSPGLTV 919 (1194)
Q Consensus 841 ~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~-~~~~~~~gyv~Q~~~~~~~lTv 919 (1194)
.+.+|+|+|+++++||+++|+|||||||||||++|+|..+ +.+|+|.++|.++.. ...+|.+|||+|++.++|.+||
T Consensus 26 ~~~~l~~vsl~i~~Ge~~~LlGpsGsGKSTLLr~IaGl~~--p~~G~I~~~g~~i~~~~~~~r~ig~vfQ~~~lfp~ltv 103 (375)
T PRK09452 26 GKEVISNLDLTINNGEFLTLLGPSGCGKTTVLRLIAGFET--PDSGRIMLDGQDITHVPAENRHVNTVFQSYALFPHMTV 103 (375)
T ss_pred CeEEEeeeEEEEeCCCEEEEECCCCCcHHHHHHHHhCCCC--CCceEEEECCEECCCCCHHHCCEEEEecCcccCCCCCH
Confidence 4579999999999999999999999999999999999877 468999999987643 2235779999999999999999
Q ss_pred HHHHHHHhhhcCCCcCcHHHHHHHHHHHHHHcCCCcccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCC
Q 000997 920 LESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSGL 999 (1194)
Q Consensus 920 ~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEPTsgL 999 (1194)
+||+.|+...+ ..+..+..+.++++++.++|.+..+..+ .+|||||||||+|||||+.+|++|+||||||||
T Consensus 104 ~eNi~~~l~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~p-----~~LSgGq~QRVaLARaL~~~P~llLLDEP~s~L 175 (375)
T PRK09452 104 FENVAFGLRMQ---KTPAAEITPRVMEALRMVQLEEFAQRKP-----HQLSGGQQQRVAIARAVVNKPKVLLLDESLSAL 175 (375)
T ss_pred HHHHHHHHhhc---CCCHHHHHHHHHHHHHHcCCchhhhCCh-----hhCCHHHHHHHHHHHHHhcCCCEEEEeCCCCcC
Confidence 99999986533 2234455567889999999998887654 589999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCeEEEEccCcEEEEeCCCC
Q 000997 1000 DARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLG 1055 (1194)
Q Consensus 1000 D~~~~~~i~~~l~~l~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~~ 1055 (1194)
|+.++..+.+.|+++.++ |.|+|++||++. ++...+|++++|+ +|+++..|++.
T Consensus 176 D~~~r~~l~~~L~~l~~~~g~tiI~vTHd~~-ea~~laDri~vl~-~G~i~~~g~~~ 230 (375)
T PRK09452 176 DYKLRKQMQNELKALQRKLGITFVFVTHDQE-EALTMSDRIVVMR-DGRIEQDGTPR 230 (375)
T ss_pred CHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEE-CCEEEEEcCHH
Confidence 999999999999999765 999999999986 6788899999998 58999998753
No 106
>COG2274 SunT ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain [Defense mechanisms]
Probab=100.00 E-value=5.9e-38 Score=385.88 Aligned_cols=256 Identities=29% Similarity=0.442 Sum_probs=201.5
Q ss_pred hHhhHHHHHHHhhcccCChHHHHHHHHHHHHhcCCCCCC--ceEEEeeeEEEEEEecCCCCCCChhHHHHHHHHHHHHHH
Q 000997 61 VQEQRLVLDRLVNAVEDDPERFFDRMRKRCEAVDLELPK--IEVRFQNLTVESFVHLGSRALPTIPNFIFNMTEALLRQL 138 (1194)
Q Consensus 61 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~--~~v~~~~l~v~~~~~~~~~~~~t~~~~~~~~~~~~~~~~ 138 (1194)
.++-+...+|+.++.+.++|.-.. +.-...|+ =+++|+|+++.=
T Consensus 436 ~q~~~~~~~rL~dil~~~~E~~~~-------~~~~~~~~~~g~I~~~nvsf~y--------------------------- 481 (709)
T COG2274 436 FQQAKVALERLGDILDTPPEQEGD-------KTLIHLPKLQGEIEFENVSFRY--------------------------- 481 (709)
T ss_pred HHHHHHHHHHHHHHhcCCcccccc-------cccccccccCceEEEEEEEEEe---------------------------
Confidence 456788889999998888873111 11123333 479999998652
Q ss_pred hHhcCCCcceeeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCceeeEEEECCccCCCCCC---CceEEEEe
Q 000997 139 RIYRGNRSKLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVP---PRTSAYVS 215 (1194)
Q Consensus 139 ~~~~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~~~---~~~~~yv~ 215 (1194)
.. .+..+|+|+|++|+|||.++|+|+||||||||+|+|+|++.|. +|+|.+||.++++..+ ++.++||+
T Consensus 482 ----~~-~~~~vL~~isL~I~~Ge~vaIvG~SGsGKSTL~KLL~gly~p~---~G~I~~dg~dl~~i~~~~lR~~ig~V~ 553 (709)
T COG2274 482 ----GP-DDPPVLEDLSLEIPPGEKVAIVGRSGSGKSTLLKLLLGLYKPQ---QGRILLDGVDLNDIDLASLRRQVGYVL 553 (709)
T ss_pred ----CC-CCcchhhceeEEeCCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CceEEECCEeHHhcCHHHHHhheeEEc
Confidence 11 2236999999999999999999999999999999999999887 9999999999887764 68999999
Q ss_pred cCCCCCCCCCHHHHHHHhhhccCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhccCcchhHHHHHHHHHhCCcccc
Q 000997 216 QQDWQVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCA 295 (1194)
Q Consensus 216 Q~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~k~~~~~~~~~~~~~~~~l~~lgL~~~~ 295 (1194)
|++.+|. .||+||+.++.. ....+.+.++|+. .+. .+. +..++..+
T Consensus 554 Q~~~Lf~-gSI~eNi~l~~p----~~~~e~i~~A~~~---------------------ag~-----~~f---I~~lP~gy 599 (709)
T COG2274 554 QDPFLFS-GSIRENIALGNP----EATDEEIIEAAQL---------------------AGA-----HEF---IENLPMGY 599 (709)
T ss_pred ccchhhc-CcHHHHHhcCCC----CCCHHHHHHHHHH---------------------hCc-----HHH---HHhccccc
Confidence 9998655 699999988532 2222233332221 110 111 34589999
Q ss_pred cccccCccCCCCChhhhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhc
Q 000997 296 DTLVGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELF 375 (1194)
Q Consensus 296 dt~vg~~~~~~LSGGqkqRvsia~al~~~~~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~ 375 (1194)
||.||+ +..+||||||||++|||||+++|+||+||||||+||+.+...|.+.|.++.+ ++|+|++. |. ..+...|
T Consensus 600 ~t~v~E-~G~~LSGGQrQrlalARaLl~~P~ILlLDEaTSaLD~~sE~~I~~~L~~~~~--~~T~I~Ia-HR-l~ti~~a 674 (709)
T COG2274 600 DTPVGE-GGANLSGGQRQRLALARALLSKPKILLLDEATSALDPETEAIILQNLLQILQ--GRTVIIIA-HR-LSTIRSA 674 (709)
T ss_pred cccccc-CCCCCCHHHHHHHHHHHHhccCCCEEEEeCcccccCHhHHHHHHHHHHHHhc--CCeEEEEE-cc-chHhhhc
Confidence 999996 4558999999999999999999999999999999999999999999998864 45666544 43 4578899
Q ss_pred CeEEEEcCCeEEEecChhhHHH
Q 000997 376 DDVILLSEGQIVYQGPRVSVLD 397 (1194)
Q Consensus 376 D~vilL~~G~iv~~G~~~~~~~ 397 (1194)
|+|++|++|+|+.+|+.+++++
T Consensus 675 drIiVl~~Gkiv~~gs~~ell~ 696 (709)
T COG2274 675 DRIIVLDQGKIVEQGSHEELLA 696 (709)
T ss_pred cEEEEccCCceeccCCHHHHHH
Confidence 9999999999999999999976
No 107
>TIGR01186 proV glycine betaine/L-proline transport ATP binding subunit. This model describes the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. Functionally, this transport system is involved in osmoregulation. Under conditions of stress, the organism recruits these transport system to accumulate glycine betaine and other solutes which offer osmo-protection. It has been demonstrated that glycine betaine uptake is accompanied by symport with sodium ions. The locus has been named variously as proU or opuA. A gene library from L.lact
Probab=100.00 E-value=1.5e-37 Score=358.28 Aligned_cols=206 Identities=22% Similarity=0.305 Sum_probs=178.7
Q ss_pred eeeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCceeeEEEECCccCCCCCC-------CceEEEEecCCCC
Q 000997 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVP-------PRTSAYVSQQDWQ 220 (1194)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~~~-------~~~~~yv~Q~d~~ 220 (1194)
+.+|+|+|++|++||+++|+|||||||||||++|+|.++|. +|+|.++|.++....+ ++.++||+|++.+
T Consensus 6 ~~~l~~vs~~i~~Gei~~l~G~sGsGKSTLLr~L~Gl~~p~---~G~I~i~G~~i~~~~~~~~~~~rr~~i~~v~Q~~~l 82 (363)
T TIGR01186 6 KKGVNDADLAIAKGEIFVIMGLSGSGKSTTVRMLNRLIEPT---AGQIFIDGENIMKQSPVELREVRRKKIGMVFQQFAL 82 (363)
T ss_pred ceeEEeeEEEEcCCCEEEEECCCCChHHHHHHHHhCCCCCC---ceEEEECCEECCcCCHHHHHHHHhCcEEEEECCCcC
Confidence 46999999999999999999999999999999999999876 9999999998876543 5689999999999
Q ss_pred CCCCCHHHHHHHhhhccCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhccCcchhHHHHHHHHHhCCccccccccc
Q 000997 221 VAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVG 300 (1194)
Q Consensus 221 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~k~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg 300 (1194)
++++||+||+.|+.+..+... .+...++.++++.+||++..++.++
T Consensus 83 ~~~~TV~eNi~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~vgL~~~~~~~p~ 128 (363)
T TIGR01186 83 FPHMTILQNTSLGPELLGWPE----------------------------------QERKEKALELLKLVGLEEYEHRYPD 128 (363)
T ss_pred CCCCCHHHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHhcCCchhhhCChh
Confidence 999999999999765432110 0112347788999999887776654
Q ss_pred CccCCCCChhhhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEE
Q 000997 301 DEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVIL 380 (1194)
Q Consensus 301 ~~~~~~LSGGqkqRvsia~al~~~~~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vil 380 (1194)
.|||||||||+|||||+.+|++|||||||+|||+.++.++.+.++++.+..+ .+|+.++|+.+++..++|+|++
T Consensus 129 -----~LSGGq~QRV~lARAL~~~p~iLLlDEP~saLD~~~r~~l~~~l~~l~~~~~-~Tii~vTHd~~ea~~~~drI~v 202 (363)
T TIGR01186 129 -----ELSGGMQQRVGLARALAAEPDILLMDEAFSALDPLIRDSMQDELKKLQATLQ-KTIVFITHDLDEAIRIGDRIVI 202 (363)
T ss_pred -----hCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcC-CEEEEEeCCHHHHHHhCCEEEE
Confidence 5999999999999999999999999999999999999999999999875444 5566688999999999999999
Q ss_pred EcCCeEEEecChhhHH
Q 000997 381 LSEGQIVYQGPRVSVL 396 (1194)
Q Consensus 381 L~~G~iv~~G~~~~~~ 396 (1194)
|++|+++..|+++++.
T Consensus 203 l~~G~iv~~g~~~ei~ 218 (363)
T TIGR01186 203 MKAGEIVQVGTPDEIL 218 (363)
T ss_pred EeCCEEEeeCCHHHHH
Confidence 9999999999998875
No 108
>cd03265 ABC_DrrA DrrA is the ATP-binding protein component of a bacterial exporter complex that confers resistance to the antibiotics daunorubicin and doxorubicin. In addition to DrrA, the complex includes an integral membrane protein called DrrB. DrrA belongs to the ABC family of transporters and shares sequence and functional similarities with a protein found in cancer cells called P-glycoprotein. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.6e-37 Score=338.70 Aligned_cols=203 Identities=28% Similarity=0.367 Sum_probs=173.1
Q ss_pred cceEEeeeeeEEEeCCcEEEEEccCCCChHHHHhhhcCCCCCCeeEEEEEEcCccCCh--hcccceeeEeecCCCCCCCC
Q 000997 840 DRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ--ETFARISGYCEQNDIHSPGL 917 (1194)
Q Consensus 840 ~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~--~~~~~~~gyv~Q~~~~~~~l 917 (1194)
+++.+|+|+|+++++||++||+||||||||||+++|+|..+ +.+|+|.++|.+... ...++.++|++|++.+++.+
T Consensus 11 ~~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~--~~~G~i~~~g~~~~~~~~~~~~~i~~~~q~~~~~~~~ 88 (220)
T cd03265 11 GDFEAVRGVSFRVRRGEIFGLLGPNGAGKTTTIKMLTTLLK--PTSGRATVAGHDVVREPREVRRRIGIVFQDLSVDDEL 88 (220)
T ss_pred CCEEeeeceeEEECCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEecCcChHHHhhcEEEecCCccccccC
Confidence 34679999999999999999999999999999999999866 468999999986532 23456799999999989999
Q ss_pred cHHHHHHHHhhhcCCCcCcHHHHHHHHHHHHHHcCCCcccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCC
Q 000997 918 TVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTS 997 (1194)
Q Consensus 918 Tv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEPTs 997 (1194)
||+|++.+....+. ....+..+.++++++.+++.+..+..+ ..||||||||++||+||+.+|++|+|||||+
T Consensus 89 tv~~~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qr~~la~al~~~p~llllDEPt~ 160 (220)
T cd03265 89 TGWENLYIHARLYG---VPGAERRERIDELLDFVGLLEAADRLV-----KTYSGGMRRRLEIARSLVHRPEVLFLDEPTI 160 (220)
T ss_pred cHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCCHHHhhCCh-----hhCCHHHHHHHHHHHHHhcCCCEEEEcCCcc
Confidence 99999988754432 222334456789999999987666543 5799999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCeEEEEccCcEEEEeCCC
Q 000997 998 GLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1194)
Q Consensus 998 gLD~~~~~~i~~~l~~l~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~ 1054 (1194)
|||+.++..+.+.|++++++ |+|||+++|+++ ++...+|++++|+ +|+++..|+.
T Consensus 161 ~LD~~~~~~l~~~l~~~~~~~~~tvi~~tH~~~-~~~~~~d~i~~l~-~G~i~~~~~~ 216 (220)
T cd03265 161 GLDPQTRAHVWEYIEKLKEEFGMTILLTTHYME-EAEQLCDRVAIID-HGRIIAEGTP 216 (220)
T ss_pred CCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEe-CCEEEEeCCh
Confidence 99999999999999999876 899999999986 5677899999998 4789888764
No 109
>cd03269 ABC_putative_ATPase This subfamily is involved in drug resistance, nodulation, lipid transport, and bacteriocin and lantibiotic immunity. In eubacteria and archaea, the typical organization consists of one ABC and one or two IMs. Eukaryote systems of the ABCA subfamily display ABC domains strongly similar to this family. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.6e-37 Score=336.23 Aligned_cols=199 Identities=24% Similarity=0.443 Sum_probs=170.3
Q ss_pred ceEEeeeeeEEEeCCcEEEEEccCCCChHHHHhhhcCCCCCCeeEEEEEEcCccCChhcccceeeEeecCCCCCCCCcHH
Q 000997 841 RLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQETFARISGYCEQNDIHSPGLTVL 920 (1194)
Q Consensus 841 ~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~~~~~~~gyv~Q~~~~~~~lTv~ 920 (1194)
++.+|+|+|+++++|++++|+||||||||||+++|+|..+ +.+|+|.++|.++.. ..++.++|++|++.+++.+|++
T Consensus 12 ~~~~l~~v~~~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~-~~~~~i~~~~q~~~~~~~~tv~ 88 (210)
T cd03269 12 RVTALDDISFSVEKGEIFGLLGPNGAGKTTTIRMILGIIL--PDSGEVLFDGKPLDI-AARNRIGYLPEERGLYPKMKVI 88 (210)
T ss_pred CEEEEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCCchhH-HHHccEEEeccCCcCCcCCcHH
Confidence 4579999999999999999999999999999999999866 468999999987643 3456799999999988999999
Q ss_pred HHHHHHhhhcCCCcCcHHHHHHHHHHHHHHcCCCcccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCC
Q 000997 921 ESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSGLD 1000 (1194)
Q Consensus 921 e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEPTsgLD 1000 (1194)
||+.+....+. .......+.++++++.+++.+..+..+ ..||||||||++||++|+.+|++|+|||||+|||
T Consensus 89 e~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrl~la~al~~~p~~lllDEP~~~LD 160 (210)
T cd03269 89 DQLVYLAQLKG---LKKEEARRRIDEWLERLELSEYANKRV-----EELSKGNQQKVQFIAAVIHDPELLILDEPFSGLD 160 (210)
T ss_pred HHHHHHHHHcC---CChHHHHHHHHHHHHHcCChHHHhCcH-----hhCCHHHHHHHHHHHHHhcCCCEEEEeCCCcCCC
Confidence 99988654432 222334456788999999987666543 5799999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCeEEEEccCcEEEEeC
Q 000997 1001 ARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAG 1052 (1194)
Q Consensus 1001 ~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g 1052 (1194)
+.++..+.+.|+++.++|+|||+++|+++ .+.+.+|++++|.+ |++++.|
T Consensus 161 ~~~~~~~~~~l~~~~~~~~tii~~sH~~~-~~~~~~d~i~~l~~-g~i~~~~ 210 (210)
T cd03269 161 PVNVELLKDVIRELARAGKTVILSTHQME-LVEELCDRVLLLNK-GRAVLYG 210 (210)
T ss_pred HHHHHHHHHHHHHHHHCCCEEEEECCCHH-HHHHhhhEEEEEeC-CEEEecC
Confidence 99999999999999877999999999976 46678999999985 7877654
No 110
>COG1124 DppF ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.6e-37 Score=323.81 Aligned_cols=205 Identities=25% Similarity=0.319 Sum_probs=176.2
Q ss_pred eeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCceeeEEEECCccCCCCC----CCceEEEEecCCC--CCC
Q 000997 149 TILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV----PPRTSAYVSQQDW--QVA 222 (1194)
Q Consensus 149 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~~----~~~~~~yv~Q~d~--~~~ 222 (1194)
++|+|||++|.+||..+|+|+||||||||.++|+|+..|. +|+|.++|.+..... ..+.+-+|+||+. +.|
T Consensus 21 ~~l~~VS~~i~~Ge~lgivGeSGsGKSTL~r~l~Gl~~p~---~G~I~~~G~~~~~~~~~~~~~~~VQmVFQDp~~SLnP 97 (252)
T COG1124 21 HALNNVSLEIERGETLGIVGESGSGKSTLARLLAGLEKPS---SGSILLDGKPLAPKKRAKAFYRPVQMVFQDPYSSLNP 97 (252)
T ss_pred hhhcceeEEecCCCEEEEEcCCCCCHHHHHHHHhcccCCC---CceEEECCcccCccccchhhccceeEEecCCccccCc
Confidence 6999999999999999999999999999999999999886 999999998765542 3578999999974 678
Q ss_pred CCCHHHHHHHhhhccCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhccCcchhHHHHHHHHHhCCcccccccccCc
Q 000997 223 EMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDE 302 (1194)
Q Consensus 223 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~k~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~ 302 (1194)
..||++.|.-+.+..+.. +.+.++.++|+.+||+...- ++
T Consensus 98 ~~tv~~~l~Epl~~~~~~------------------------------------~~~~~i~~~L~~VgL~~~~l----~R 137 (252)
T COG1124 98 RRTVGRILSEPLRPHGLS------------------------------------KSQQRIAELLDQVGLPPSFL----DR 137 (252)
T ss_pred chhHHHHHhhhhccCCcc------------------------------------HHHHHHHHHHHHcCCCHHHH----hc
Confidence 899999997655442211 11233788999999986432 24
Q ss_pred cCCCCChhhhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEc
Q 000997 303 MLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLS 382 (1194)
Q Consensus 303 ~~~~LSGGqkqRvsia~al~~~~~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~ 382 (1194)
....|||||||||+|||||..+|++|++|||||+||++...+|++.|.++.+.. +.+.+.++|+..-+..+||||++|+
T Consensus 138 ~P~eLSGGQ~QRiaIARAL~~~PklLIlDEptSaLD~siQa~IlnlL~~l~~~~-~lt~l~IsHdl~~v~~~cdRi~Vm~ 216 (252)
T COG1124 138 RPHELSGGQRQRIAIARALIPEPKLLILDEPTSALDVSVQAQILNLLLELKKER-GLTYLFISHDLALVEHMCDRIAVMD 216 (252)
T ss_pred CchhcChhHHHHHHHHHHhccCCCEEEecCchhhhcHHHHHHHHHHHHHHHHhc-CceEEEEeCcHHHHHHHhhheeeee
Confidence 556799999999999999999999999999999999999999999999998764 4566779999999999999999999
Q ss_pred CCeEEEecChhhHHH
Q 000997 383 EGQIVYQGPRVSVLD 397 (1194)
Q Consensus 383 ~G~iv~~G~~~~~~~ 397 (1194)
+|++++.++.+++.+
T Consensus 217 ~G~ivE~~~~~~l~~ 231 (252)
T COG1124 217 NGQIVEIGPTEELLS 231 (252)
T ss_pred CCeEEEeechhhhhc
Confidence 999999999998864
No 111
>PRK09452 potA putrescine/spermidine ABC transporter ATPase protein; Reviewed
Probab=100.00 E-value=1.6e-37 Score=360.40 Aligned_cols=218 Identities=27% Similarity=0.363 Sum_probs=184.5
Q ss_pred eeeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCceeeEEEECCccCCCCCC-CceEEEEecCCCCCCCCCH
Q 000997 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVP-PRTSAYVSQQDWQVAEMTV 226 (1194)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lTV 226 (1194)
.++|+|+|+++++||+++|+|||||||||||++|+|.++++ +|+|.++|.++....+ ++.++||+|++.+||++||
T Consensus 27 ~~~l~~vsl~i~~Ge~~~LlGpsGsGKSTLLr~IaGl~~p~---~G~I~~~g~~i~~~~~~~r~ig~vfQ~~~lfp~ltv 103 (375)
T PRK09452 27 KEVISNLDLTINNGEFLTLLGPSGCGKTTVLRLIAGFETPD---SGRIMLDGQDITHVPAENRHVNTVFQSYALFPHMTV 103 (375)
T ss_pred eEEEeeeEEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCC---ceEEEECCEECCCCCHHHCCEEEEecCcccCCCCCH
Confidence 35899999999999999999999999999999999999876 9999999998865443 4779999999999999999
Q ss_pred HHHHHHhhhccCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhccCcchhHHHHHHHHHhCCcccccccccCccCCC
Q 000997 227 RETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEMLKG 306 (1194)
Q Consensus 227 ~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~k~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~ 306 (1194)
+||+.|+.+.++... .+...+++++++.+||++..+..+ ..
T Consensus 104 ~eNi~~~l~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~p-----~~ 144 (375)
T PRK09452 104 FENVAFGLRMQKTPA----------------------------------AEITPRVMEALRMVQLEEFAQRKP-----HQ 144 (375)
T ss_pred HHHHHHHHhhcCCCH----------------------------------HHHHHHHHHHHHHcCCchhhhCCh-----hh
Confidence 999999764322110 011234788999999998877655 46
Q ss_pred CChhhhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEcCCeE
Q 000997 307 ISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEGQI 386 (1194)
Q Consensus 307 LSGGqkqRvsia~al~~~~~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~~G~i 386 (1194)
|||||||||+|||||+.+|++|+||||++|||..++..+.+.|+++.+..+ ++++.++|+..++..++|+|++|++|++
T Consensus 145 LSgGq~QRVaLARaL~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~g-~tiI~vTHd~~ea~~laDri~vl~~G~i 223 (375)
T PRK09452 145 LSGGQQQRVAIARAVVNKPKVLLLDESLSALDYKLRKQMQNELKALQRKLG-ITFVFVTHDQEEALTMSDRIVVMRDGRI 223 (375)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcC-CEEEEEeCCHHHHHHhCCEEEEEECCEE
Confidence 999999999999999999999999999999999999999999999877544 5566688999999999999999999999
Q ss_pred EEecChhhHHHHHHhcCCCCCCCCChhHHH
Q 000997 387 VYQGPRVSVLDFFASMGFSCPKRKNVADFL 416 (1194)
Q Consensus 387 v~~G~~~~~~~~F~~~G~~cp~~~~~adfl 416 (1194)
+..|+++++. ..|...-+|+|+
T Consensus 224 ~~~g~~~~i~--------~~p~~~~~a~~~ 245 (375)
T PRK09452 224 EQDGTPREIY--------EEPKNLFVARFI 245 (375)
T ss_pred EEEcCHHHHH--------hCcccHHHHHhc
Confidence 9999998873 345544455554
No 112
>PRK11153 metN DL-methionine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.2e-37 Score=356.43 Aligned_cols=202 Identities=26% Similarity=0.339 Sum_probs=174.5
Q ss_pred ceEEeeeeeEEEeCCcEEEEEccCCCChHHHHhhhcCCCCCCeeEEEEEEcCccCCh------hcccceeeEeecCCCCC
Q 000997 841 RLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ------ETFARISGYCEQNDIHS 914 (1194)
Q Consensus 841 ~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~------~~~~~~~gyv~Q~~~~~ 914 (1194)
++.+|+|+||++++||++||+||||||||||+++|+|..+ +.+|+|.++|.++.. ..+++.+||++|++.++
T Consensus 17 ~~~il~~vsl~i~~Gei~~iiG~nGsGKSTLlk~L~Gl~~--p~~G~I~~~g~~i~~~~~~~~~~~~~~ig~v~q~~~l~ 94 (343)
T PRK11153 17 TIHALNNVSLHIPAGEIFGVIGASGAGKSTLIRCINLLER--PTSGRVLVDGQDLTALSEKELRKARRQIGMIFQHFNLL 94 (343)
T ss_pred ceEEEEeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCC--CCceEEEECCEECCcCCHHHHHHHhcCEEEEeCCCccC
Confidence 3579999999999999999999999999999999999876 468999999987642 12356799999999999
Q ss_pred CCCcHHHHHHHHhhhcCCCcCcHHHHHHHHHHHHHHcCCCcccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeC
Q 000997 915 PGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDE 994 (1194)
Q Consensus 915 ~~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illLDE 994 (1194)
+.+||+||+.+....+. ....+..+.++++++.++|.+..+..+ ..|||||||||+|||||+.+|+||||||
T Consensus 95 ~~~tv~eni~~~~~~~~---~~~~~~~~~~~~~l~~~gL~~~~~~~~-----~~LSgGq~qRv~lAraL~~~p~iLlLDE 166 (343)
T PRK11153 95 SSRTVFDNVALPLELAG---TPKAEIKARVTELLELVGLSDKADRYP-----AQLSGGQKQRVAIARALASNPKVLLCDE 166 (343)
T ss_pred CCCcHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCCchhhhCCh-----hhCCHHHHHHHHHHHHHHcCCCEEEEeC
Confidence 99999999998754432 233444567889999999987766543 5899999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCeEEEEccCcEEEEeCCC
Q 000997 995 PTSGLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1194)
Q Consensus 995 PTsgLD~~~~~~i~~~l~~l~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~ 1054 (1194)
||+|||+.++..+++.|++++++ |+|||++||+++ ++.+.||++++|+ +|++++.|+.
T Consensus 167 Pts~LD~~~~~~l~~~L~~l~~~~g~tiilvtH~~~-~i~~~~d~v~~l~-~G~i~~~g~~ 225 (343)
T PRK11153 167 ATSALDPATTRSILELLKDINRELGLTIVLITHEMD-VVKRICDRVAVID-AGRLVEQGTV 225 (343)
T ss_pred CcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEE-CCEEEEEcCH
Confidence 99999999999999999999765 899999999986 5667899999998 5899998875
No 113
>COG2884 FtsE Predicted ATPase involved in cell division [Cell division and chromosome partitioning]
Probab=100.00 E-value=1.5e-37 Score=309.51 Aligned_cols=199 Identities=26% Similarity=0.380 Sum_probs=175.8
Q ss_pred eeeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCceeeEEEECCccCCCCC------CCceEEEEecCCCCC
Q 000997 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV------PPRTSAYVSQQDWQV 221 (1194)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~~------~~~~~~yv~Q~d~~~ 221 (1194)
.++|+|||+.|++||++.|+||||||||||||.|.+...|+ .|+|.+||+++.... .+|.+|+|+|+.-++
T Consensus 15 ~~aL~~vs~~i~~Gef~fl~GpSGAGKSTllkLi~~~e~pt---~G~i~~~~~dl~~l~~~~iP~LRR~IGvVFQD~rLL 91 (223)
T COG2884 15 REALRDVSFHIPKGEFVFLTGPSGAGKSTLLKLIYGEERPT---RGKILVNGHDLSRLKGREIPFLRRQIGVVFQDFRLL 91 (223)
T ss_pred chhhhCceEeecCceEEEEECCCCCCHHHHHHHHHhhhcCC---CceEEECCeecccccccccchhhheeeeEeeecccc
Confidence 56999999999999999999999999999999999998776 999999999986553 368999999999999
Q ss_pred CCCCHHHHHHHhhhccCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhccCcchhHHHHHHHHHhCCcccccccccC
Q 000997 222 AEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGD 301 (1194)
Q Consensus 222 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~k~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 301 (1194)
+..||.||++|+.+..|... .+.+.++.++|+..||.+.++..
T Consensus 92 ~~~tvyeNVA~pL~v~G~~~----------------------------------~~i~~rV~~~L~~VgL~~k~~~l--- 134 (223)
T COG2884 92 PDRTVYENVALPLRVIGKPP----------------------------------REIRRRVSEVLDLVGLKHKARAL--- 134 (223)
T ss_pred ccchHhhhhhhhhhccCCCH----------------------------------HHHHHHHHHHHHHhccchhhhcC---
Confidence 99999999999988765321 12245688999999999988754
Q ss_pred ccCCCCChhhhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEE
Q 000997 302 EMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILL 381 (1194)
Q Consensus 302 ~~~~~LSGGqkqRvsia~al~~~~~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL 381 (1194)
...|||||+|||+||||++.+|++|+-||||-.||+..+.+|++.+.++.+. +|+|+..+|+..-+..+--+++.|
T Consensus 135 --P~~LSGGEQQRvaIARAiV~~P~vLlADEPTGNLDp~~s~~im~lfeeinr~--GtTVl~ATHd~~lv~~~~~rvl~l 210 (223)
T COG2884 135 --PSQLSGGEQQRVAIARAIVNQPAVLLADEPTGNLDPDLSWEIMRLFEEINRL--GTTVLMATHDLELVNRMRHRVLAL 210 (223)
T ss_pred --ccccCchHHHHHHHHHHHccCCCeEeecCCCCCCChHHHHHHHHHHHHHhhc--CcEEEEEeccHHHHHhccCcEEEE
Confidence 3469999999999999999999999999999999999999999999998753 677777889998888898999999
Q ss_pred cCCeEEEec
Q 000997 382 SEGQIVYQG 390 (1194)
Q Consensus 382 ~~G~iv~~G 390 (1194)
++|+++...
T Consensus 211 ~~Grl~~d~ 219 (223)
T COG2884 211 EDGRLVRDE 219 (223)
T ss_pred eCCEEEecc
Confidence 999998764
No 114
>cd03219 ABC_Mj1267_LivG_branched The Mj1267/LivG ABC transporter subfamily is involved in the transport of the hydrophobic amino acids leucine, isoleucine and valine. MJ1267 is a branched-chain amino acid transporter with 29% similarity to both the LivF and LivG components of the E. coli branched-chain amino acid transporter. MJ1267 contains an insertion from residues 114 to 123 characteristic of LivG (Leucine-Isoleucine-Valine) homologs. The branched-chain amino acid transporter from E. coli comprises a heterodimer of ABCs (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ).
Probab=100.00 E-value=3e-37 Score=340.48 Aligned_cols=205 Identities=29% Similarity=0.391 Sum_probs=172.4
Q ss_pred ceEEeeeeeEEEeCCcEEEEEccCCCChHHHHhhhcCCCCCCeeEEEEEEcCccCChh---c-ccceeeEeecCCCCCCC
Q 000997 841 RLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQE---T-FARISGYCEQNDIHSPG 916 (1194)
Q Consensus 841 ~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~---~-~~~~~gyv~Q~~~~~~~ 916 (1194)
++.+|+|+|+++++||++||+||||||||||+++|+|..+ +.+|+|.++|.++... . .++.++|++|++.+++.
T Consensus 12 ~~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~l~~~ 89 (236)
T cd03219 12 GLVALDDVSFSVRPGEIHGLIGPNGAGKTTLFNLISGFLR--PTSGSVLFDGEDITGLPPHEIARLGIGRTFQIPRLFPE 89 (236)
T ss_pred CEEEecCceEEecCCcEEEEECCCCCCHHHHHHHHcCCCC--CCCceEEECCEECCCCCHHHHHhcCEEEEecccccccC
Confidence 4579999999999999999999999999999999999876 4689999999876431 1 23568999999999999
Q ss_pred CcHHHHHHHHhhhcCCCc-------CcHHHHHHHHHHHHHHcCCCcccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCE
Q 000997 917 LTVLESLLFSAWLRLPSE-------IELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSI 989 (1194)
Q Consensus 917 lTv~e~l~f~~~lr~~~~-------~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~i 989 (1194)
+||+||+.+......... .......+.++++++.+++.+..+..+ ..||||||||++||++|+.+|++
T Consensus 90 ~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSgG~~qrv~la~al~~~p~l 164 (236)
T cd03219 90 LTVLENVMVAAQARTGSGLLLARARREEREARERAEELLERVGLADLADRPA-----GELSYGQQRRLEIARALATDPKL 164 (236)
T ss_pred CCHHHHHHHHHhhccccccccccccccHHHHHHHHHHHHHHcCccchhhCCh-----hhCCHHHHHHHHHHHHHhcCCCE
Confidence 999999988754321110 012334456788999999987666543 58999999999999999999999
Q ss_pred EEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCeEEEEccCcEEEEeCCC
Q 000997 990 VFMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1194)
Q Consensus 990 llLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~ 1054 (1194)
|+|||||+|||+.++..+++.|++++++|+|||+++|+++ ++.+.+|++++|++ |++++.|+.
T Consensus 165 lllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~vsH~~~-~~~~~~d~i~~l~~-G~i~~~~~~ 227 (236)
T cd03219 165 LLLDEPAAGLNPEETEELAELIRELRERGITVLLVEHDMD-VVMSLADRVTVLDQ-GRVIAEGTP 227 (236)
T ss_pred EEEcCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEecCHH-HHHHhCCEEEEEeC-CEEEeecCH
Confidence 9999999999999999999999999878999999999986 56678999999984 789888874
No 115
>PRK11607 potG putrescine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.9e-37 Score=359.03 Aligned_cols=203 Identities=24% Similarity=0.355 Sum_probs=177.8
Q ss_pred ceEEeeeeeEEEeCCcEEEEEccCCCChHHHHhhhcCCCCCCeeEEEEEEcCccCCh-hcccceeeEeecCCCCCCCCcH
Q 000997 841 RLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ-ETFARISGYCEQNDIHSPGLTV 919 (1194)
Q Consensus 841 ~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~-~~~~~~~gyv~Q~~~~~~~lTv 919 (1194)
+..+|+|+|+++++||+++|+|||||||||||++|+|..+ +.+|+|.++|.++.. ...+|.+|||+|++.++|++||
T Consensus 31 ~~~~l~~vsl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~--p~~G~I~i~g~~i~~~~~~~r~ig~vfQ~~~lfp~ltv 108 (377)
T PRK11607 31 GQHAVDDVSLTIYKGEIFALLGASGCGKSTLLRMLAGFEQ--PTAGQIMLDGVDLSHVPPYQRPINMMFQSYALFPHMTV 108 (377)
T ss_pred CEEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCC--CCceEEEECCEECCCCCHHHCCEEEEeCCCccCCCCCH
Confidence 4579999999999999999999999999999999999877 568999999987643 2346789999999999999999
Q ss_pred HHHHHHHhhhcCCCcCcHHHHHHHHHHHHHHcCCCcccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCC
Q 000997 920 LESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSGL 999 (1194)
Q Consensus 920 ~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEPTsgL 999 (1194)
.||+.|+...+ .....+.+++++++++.+++.+..+... .+|||||||||+|||||+.+|++|+|||||++|
T Consensus 109 ~eNi~~~l~~~---~~~~~~~~~~v~~~l~~l~L~~~~~~~~-----~~LSgGq~QRVaLARAL~~~P~lLLLDEP~s~L 180 (377)
T PRK11607 109 EQNIAFGLKQD---KLPKAEIASRVNEMLGLVHMQEFAKRKP-----HQLSGGQRQRVALARSLAKRPKLLLLDEPMGAL 180 (377)
T ss_pred HHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCchhhcCCh-----hhCCHHHHHHHHHHHHHhcCCCEEEEeCCcccC
Confidence 99999976543 2234555667899999999988877653 589999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHh-CCCEEEEEecCCcHHHHHhcCeEEEEccCcEEEEeCCCC
Q 000997 1000 DARAAAIVMRTVRNIVN-TGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLG 1055 (1194)
Q Consensus 1000 D~~~~~~i~~~l~~l~~-~g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~~ 1055 (1194)
|..++..+.+.|+++.+ .|.|+|++|||++ ++...+|++++|+ +|+++..|++.
T Consensus 181 D~~~r~~l~~~l~~l~~~~g~tii~vTHd~~-ea~~laDri~vl~-~G~i~~~g~~~ 235 (377)
T PRK11607 181 DKKLRDRMQLEVVDILERVGVTCVMVTHDQE-EAMTMAGRIAIMN-RGKFVQIGEPE 235 (377)
T ss_pred CHHHHHHHHHHHHHHHHhcCCEEEEEcCCHH-HHHHhCCEEEEEe-CCEEEEEcCHH
Confidence 99999999999999865 4999999999986 6788999999998 58999999853
No 116
>COG3840 ThiQ ABC-type thiamine transport system, ATPase component [Coenzyme metabolism]
Probab=100.00 E-value=1.3e-37 Score=306.99 Aligned_cols=201 Identities=25% Similarity=0.369 Sum_probs=173.6
Q ss_pred cceEeEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCceeeEEEECCccCCCCCC-CceEEEEecCCCCCCCCCHHHHHH
Q 000997 153 DLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVP-PRTSAYVSQQDWQVAEMTVRETLD 231 (1194)
Q Consensus 153 ~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lTV~E~l~ 231 (1194)
.+++.|++||+++|+||||||||||||.|+|...|. +|+|.+||.+.....| .|-++.++|+..+|.++||.+|+.
T Consensus 17 ~fdl~v~~ge~vAi~GpSGaGKSTLLnLIAGF~~P~---~G~i~i~g~d~t~~~P~~RPVSmlFQEnNLFaHLtV~qNig 93 (231)
T COG3840 17 RFDLTVPAGEIVAILGPSGAGKSTLLNLIAGFETPA---SGEILINGVDHTASPPAERPVSMLFQENNLFAHLTVAQNIG 93 (231)
T ss_pred EEEEeecCCcEEEEECCCCccHHHHHHHHHhccCCC---CceEEEcCeecCcCCcccCChhhhhhccccchhhhhhhhhc
Confidence 477899999999999999999999999999999876 9999999999877655 578999999999999999999998
Q ss_pred HhhhccCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhccCcchhHHHHHHHHHhCCcccccccccCccCCCCChhh
Q 000997 232 FAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEMLKGISGGQ 311 (1194)
Q Consensus 232 f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~k~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~LSGGq 311 (1194)
++.. ++-+.. .+..++++.++...||..+.+.+-+ .|||||
T Consensus 94 LGl~---P~LkL~-------------------------------a~~r~~v~~aa~~vGl~~~~~RLP~-----~LSGGq 134 (231)
T COG3840 94 LGLS---PGLKLN-------------------------------AEQREKVEAAAAQVGLAGFLKRLPG-----ELSGGQ 134 (231)
T ss_pred ccCC---cccccC-------------------------------HHHHHHHHHHHHHhChhhHhhhCcc-----ccCchH
Confidence 8642 111110 0113358889999999999887665 599999
Q ss_pred hhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEcCCeEEEecC
Q 000997 312 KKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEGQIVYQGP 391 (1194)
Q Consensus 312 kqRvsia~al~~~~~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~~G~iv~~G~ 391 (1194)
||||++||+|+.+-+||+||||+|+||+.-+.++...+.+++.+.+.|+++ ++|+.+++..++|+++++++|+|.++|+
T Consensus 135 RQRvALARclvR~~PilLLDEPFsALdP~LR~eMl~Lv~~l~~E~~~Tllm-VTH~~~Da~~ia~~~~fl~~Gri~~~g~ 213 (231)
T COG3840 135 RQRVALARCLVREQPILLLDEPFSALDPALRAEMLALVSQLCDERKMTLLM-VTHHPEDAARIADRVVFLDNGRIAAQGS 213 (231)
T ss_pred HHHHHHHHHHhccCCeEEecCchhhcCHHHHHHHHHHHHHHHHhhCCEEEE-EeCCHHHHHHhhhceEEEeCCEEEeecc
Confidence 999999999999999999999999999999999999999999876656555 6677788999999999999999999999
Q ss_pred hhhHH
Q 000997 392 RVSVL 396 (1194)
Q Consensus 392 ~~~~~ 396 (1194)
.++..
T Consensus 214 ~~~~~ 218 (231)
T COG3840 214 TQELL 218 (231)
T ss_pred HHHHh
Confidence 87764
No 117
>TIGR03522 GldA_ABC_ATP gliding motility-associated ABC transporter ATP-binding subunit GldA. Members of this protein family are exclusive to the Bacteroidetes phylum (previously Cytophaga-Flavobacteria-Bacteroides). GldA is an ABC transporter ATP-binding protein (pfam00005) linked to a type of rapid surface gliding motility found in certain Bacteroidetes, such as Flavobacterium johnsoniae and Cytophaga hutchinsonii. Knockouts of GldA abolish the gliding phenotype. Gliding motility appears closely linked to chitin utilization in the model species Flavobacterium johnsoniae. Bacteroidetes with members of this protein family appear to have all of the genes associated with gliding motility.
Probab=100.00 E-value=2.7e-37 Score=351.80 Aligned_cols=202 Identities=26% Similarity=0.375 Sum_probs=176.2
Q ss_pred cceEEeeeeeEEEeCCcEEEEEccCCCChHHHHhhhcCCCCCCeeEEEEEEcCccCCh--hcccceeeEeecCCCCCCCC
Q 000997 840 DRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ--ETFARISGYCEQNDIHSPGL 917 (1194)
Q Consensus 840 ~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~--~~~~~~~gyv~Q~~~~~~~l 917 (1194)
+++.+|+|+||++++||++||+|||||||||||++|+|... +.+|+|.++|.+... ...++.+||++|++.+++.+
T Consensus 13 ~~~~~l~~is~~i~~Gei~~l~G~NGaGKTTLl~~l~Gl~~--~~~G~i~i~g~~~~~~~~~~~~~ig~~~q~~~l~~~~ 90 (301)
T TIGR03522 13 GTQNALDEVSFEAQKGRIVGFLGPNGAGKSTTMKIITGYLP--PDSGSVQVCGEDVLQNPKEVQRNIGYLPEHNPLYLDM 90 (301)
T ss_pred CCEEEEEEeEEEEeCCeEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEEcccChHHHHhceEEecCCCCCCCCC
Confidence 45679999999999999999999999999999999999876 568999999987643 23456799999999999999
Q ss_pred cHHHHHHHHhhhcCCCcCcHHHHHHHHHHHHHHcCCCcccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCC
Q 000997 918 TVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTS 997 (1194)
Q Consensus 918 Tv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEPTs 997 (1194)
|+.||+.|.+.++. ....+..+.++++++.+++.+..+..+ +.||||||||++||+||+.+|++|||||||+
T Consensus 91 tv~e~l~~~~~~~~---~~~~~~~~~~~~~l~~~gl~~~~~~~~-----~~LS~G~~qrv~la~al~~~p~lliLDEPt~ 162 (301)
T TIGR03522 91 YVREYLQFIAGIYG---MKGQLLKQRVEEMIELVGLRPEQHKKI-----GQLSKGYRQRVGLAQALIHDPKVLILDEPTT 162 (301)
T ss_pred cHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHCCCchHhcCch-----hhCCHHHHHHHHHHHHHhcCCCEEEEcCCcc
Confidence 99999998776542 223344456789999999998877654 5799999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCeEEEEccCcEEEEeCCC
Q 000997 998 GLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1194)
Q Consensus 998 gLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~ 1054 (1194)
|||+.++..+++.|+++++ ++|||++||+++ ++.+.||++++|+ +|++++.|+.
T Consensus 163 gLD~~~~~~l~~~l~~~~~-~~tiii~sH~l~-~~~~~~d~i~~l~-~G~i~~~g~~ 216 (301)
T TIGR03522 163 GLDPNQLVEIRNVIKNIGK-DKTIILSTHIMQ-EVEAICDRVIIIN-KGKIVADKKL 216 (301)
T ss_pred cCCHHHHHHHHHHHHHhcC-CCEEEEEcCCHH-HHHHhCCEEEEEE-CCEEEEeCCH
Confidence 9999999999999999864 799999999986 5778899999998 5899999986
No 118
>cd03218 ABC_YhbG The ABC transporters belonging to the YhbG family are similar to members of the Mj1267_LivG family, which is involved in the transport of branched-chain amino acids. The genes yhbG and yhbN are located in a single operon and may function together in cell envelope during biogenesis. YhbG is the putative ATP-binding cassette component and YhbN is the putative periplasmic-binding protein. Depletion of each gene product leads to growth arrest, irreversible cell damage and loss of viability in E. coli. The YhbG homolog (NtrA) is essential in Rhizobium meliloti, a symbiotic nitrogen-fixing bacterium.
Probab=100.00 E-value=2.9e-37 Score=339.71 Aligned_cols=203 Identities=24% Similarity=0.349 Sum_probs=172.8
Q ss_pred cceEEeeeeeEEEeCCcEEEEEccCCCChHHHHhhhcCCCCCCeeEEEEEEcCccCCh---hc-ccceeeEeecCCCCCC
Q 000997 840 DRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ---ET-FARISGYCEQNDIHSP 915 (1194)
Q Consensus 840 ~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~---~~-~~~~~gyv~Q~~~~~~ 915 (1194)
+++.+|+|+||++++||++||+||||||||||+++|+|..+ +.+|+|.++|.+... .. .++.++|++|++.+++
T Consensus 11 ~~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~ 88 (232)
T cd03218 11 GKRKVVNGVSLSVKQGEIVGLLGPNGAGKTTTFYMIVGLVK--PDSGKILLDGQDITKLPMHKRARLGIGYLPQEASIFR 88 (232)
T ss_pred CCEEeeccceeEecCCcEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEecccCCHhHHHhccEEEecCCccccc
Confidence 34579999999999999999999999999999999999876 468999999987532 12 2356899999999999
Q ss_pred CCcHHHHHHHHhhhcCCCcCcHHHHHHHHHHHHHHcCCCcccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCC
Q 000997 916 GLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEP 995 (1194)
Q Consensus 916 ~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEP 995 (1194)
.+|++||+.+....+. .......+.++++++.+++.+..+..+ ..||||||||++||++|+.+|++|+||||
T Consensus 89 ~~tv~~~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrl~la~al~~~p~llllDEP 160 (232)
T cd03218 89 KLTVEENILAVLEIRG---LSKKEREEKLEELLEEFHITHLRKSKA-----SSLSGGERRRVEIARALATNPKFLLLDEP 160 (232)
T ss_pred cCcHHHHHHHHHHhcC---CCHHHHHHHHHHHHHHcCChhhhhCCh-----hhCCHHHHHHHHHHHHHhcCCCEEEecCC
Confidence 9999999987643322 222334456788999999987666543 57999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCeEEEEccCcEEEEeCCC
Q 000997 996 TSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1194)
Q Consensus 996 TsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~ 1054 (1194)
|+|||+.++..+.+.|+++.++|+|||+++|+++ ++.+.+|++++|+ +|++++.|+.
T Consensus 161 t~~LD~~~~~~~~~~l~~~~~~~~tii~~sH~~~-~~~~~~d~i~~l~-~G~i~~~~~~ 217 (232)
T cd03218 161 FAGVDPIAVQDIQKIIKILKDRGIGVLITDHNVR-ETLSITDRAYIIY-EGKVLAEGTP 217 (232)
T ss_pred cccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhCCEEEEEE-CCeEEEEeCH
Confidence 9999999999999999999877999999999986 5778899999998 5789888875
No 119
>PRK11000 maltose/maltodextrin transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.9e-37 Score=359.69 Aligned_cols=204 Identities=27% Similarity=0.388 Sum_probs=176.5
Q ss_pred cceEEeeeeeEEEeCCcEEEEEccCCCChHHHHhhhcCCCCCCeeEEEEEEcCccCCh-hcccceeeEeecCCCCCCCCc
Q 000997 840 DRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ-ETFARISGYCEQNDIHSPGLT 918 (1194)
Q Consensus 840 ~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~-~~~~~~~gyv~Q~~~~~~~lT 918 (1194)
+++.+|+|+|+++++||+++|+|||||||||||++|+|..+ +.+|+|.++|.++.. ...++.+|||+|+..+++.+|
T Consensus 14 ~~~~vl~~vsl~i~~Ge~~~l~G~nGsGKSTLL~~iaGl~~--p~~G~I~~~g~~i~~~~~~~~~i~~v~Q~~~l~~~~t 91 (369)
T PRK11000 14 GDVVISKDINLDIHEGEFVVFVGPSGCGKSTLLRMIAGLED--ITSGDLFIGEKRMNDVPPAERGVGMVFQSYALYPHLS 91 (369)
T ss_pred CCeEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCC--CCceEEEECCEECCCCCHhHCCEEEEeCCcccCCCCC
Confidence 34579999999999999999999999999999999999876 468999999987643 123467999999999999999
Q ss_pred HHHHHHHHhhhcCCCcCcHHHHHHHHHHHHHHcCCCcccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCC
Q 000997 919 VLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSG 998 (1194)
Q Consensus 919 v~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEPTsg 998 (1194)
|+||+.|....+. ....+..+.++++++.++|.+..+..+ .+|||||||||+|||||+.+|++|+|||||+|
T Consensus 92 v~eni~~~~~~~~---~~~~~~~~~~~~~l~~lgL~~~~~~~~-----~~LSgGq~QRvaLAraL~~~P~lLLLDEPts~ 163 (369)
T PRK11000 92 VAENMSFGLKLAG---AKKEEINQRVNQVAEVLQLAHLLDRKP-----KALSGGQRQRVAIGRTLVAEPSVFLLDEPLSN 163 (369)
T ss_pred HHHHHHhHHhhcC---CCHHHHHHHHHHHHHHcCChhhhcCCh-----hhCCHHHHHHHHHHHHHhcCCCEEEEeCCccc
Confidence 9999998765432 233444567899999999987777653 58999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCeEEEEccCcEEEEeCCCC
Q 000997 999 LDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLG 1055 (1194)
Q Consensus 999 LD~~~~~~i~~~l~~l~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~~ 1055 (1194)
||+.++..+.+.|+++.++ |.|||++||+++ ++...+|++++|+ +|+++..|++.
T Consensus 164 LD~~~~~~l~~~L~~l~~~~g~tvI~vTHd~~-~~~~~~d~i~vl~-~G~i~~~g~~~ 219 (369)
T PRK11000 164 LDAALRVQMRIEISRLHKRLGRTMIYVTHDQV-EAMTLADKIVVLD-AGRVAQVGKPL 219 (369)
T ss_pred CCHHHHHHHHHHHHHHHHHhCCEEEEEeCCHH-HHHHhCCEEEEEE-CCEEEEEcCHH
Confidence 9999999999999999765 899999999986 5778899999998 58999988753
No 120
>PRK09536 btuD corrinoid ABC transporter ATPase; Reviewed
Probab=100.00 E-value=2.2e-37 Score=361.06 Aligned_cols=207 Identities=28% Similarity=0.375 Sum_probs=176.9
Q ss_pred cceEEeeeeeEEEeCCcEEEEEccCCCChHHHHhhhcCCCCCCeeEEEEEEcCccCCh---hcccceeeEeecCCCCCCC
Q 000997 840 DRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ---ETFARISGYCEQNDIHSPG 916 (1194)
Q Consensus 840 ~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~---~~~~~~~gyv~Q~~~~~~~ 916 (1194)
+++.+|+|+||++++||+++|+|||||||||||++|+|..+ +.+|+|.++|.++.. ..+++.+|||+|++.+++.
T Consensus 14 ~~~~vL~~vs~~i~~Geiv~liGpNGaGKSTLLk~LaGll~--p~sG~I~l~G~~i~~~~~~~~~~~ig~v~q~~~l~~~ 91 (402)
T PRK09536 14 GDTTVLDGVDLSVREGSLVGLVGPNGAGKTTLLRAINGTLT--PTAGTVLVAGDDVEALSARAASRRVASVPQDTSLSFE 91 (402)
T ss_pred CCEEEEEeeEEEECCCCEEEEECCCCchHHHHHHHHhcCCC--CCCcEEEECCEEcCcCCHHHHhcceEEEccCCCCCCC
Confidence 45789999999999999999999999999999999999876 468999999987643 3456789999999999899
Q ss_pred CcHHHHHHHHhhhcCC-CcCcHHHHHHHHHHHHHHcCCCcccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCC
Q 000997 917 LTVLESLLFSAWLRLP-SEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEP 995 (1194)
Q Consensus 917 lTv~e~l~f~~~lr~~-~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEP 995 (1194)
+||+|++.++...... ........++.++++++.+++.+..+..+ ..||||||||+.|||||+++|+||+||||
T Consensus 92 ~tv~e~v~~~~~~~~~~~~~~~~~~~~~v~~~le~vgl~~~~~~~~-----~~LSgGerQRv~IArAL~~~P~iLLLDEP 166 (402)
T PRK09536 92 FDVRQVVEMGRTPHRSRFDTWTETDRAAVERAMERTGVAQFADRPV-----TSLSGGERQRVLLARALAQATPVLLLDEP 166 (402)
T ss_pred CCHHHHHHhccchhcccccCCCHHHHHHHHHHHHHcCCchhhcCCh-----hhCCHHHHHHHHHHHHHHcCCCEEEEECC
Confidence 9999999886421110 00012334567899999999988877654 58999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCeEEEEccCcEEEEeCCCC
Q 000997 996 TSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLG 1055 (1194)
Q Consensus 996 TsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~~ 1055 (1194)
|+|||+.++..++++|++++++|+|||+++|+++ ++.+.||++++|+ +|++++.|+..
T Consensus 167 tsgLD~~~~~~l~~lL~~l~~~g~TIIivsHdl~-~~~~~adrii~l~-~G~iv~~G~~~ 224 (402)
T PRK09536 167 TASLDINHQVRTLELVRRLVDDGKTAVAAIHDLD-LAARYCDELVLLA-DGRVRAAGPPA 224 (402)
T ss_pred cccCCHHHHHHHHHHHHHHHhcCCEEEEEECCHH-HHHHhCCEEEEEE-CCEEEEecCHH
Confidence 9999999999999999999877999999999986 5778899999998 58999999864
No 121
>cd03260 ABC_PstB_phosphate_transporter Phosphate uptake is of fundamental importance in the cell physiology of bacteria because phosphate is required as a nutrient. The Pst system of E. coli comprises four distinct subunits encoded by the pstS, pstA, pstB, and pstC genes. The PstS protein is a phosphate-binding protein located in the periplasmic space. P stA and PstC are hydrophobic and they form the transmembrane portion of the Pst system. PstB is the catalytic subunit, which couples the energy of ATP hydrolysis to the import of phosphate across cellular membranes through the Pst system, often referred as ABC-protein. PstB belongs to one of the largest superfamilies of proteins characterized by a highly conserved adenosine triphosphate (ATP) binding cassette (ABC), which is also a nucleotide binding domain (NBD).
Probab=100.00 E-value=3e-37 Score=338.37 Aligned_cols=204 Identities=25% Similarity=0.315 Sum_probs=170.4
Q ss_pred ceEEeeeeeEEEeCCcEEEEEccCCCChHHHHhhhcCCC-----CCCeeEEEEEEcCccCCh-----hcccceeeEeecC
Q 000997 841 RLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRK-----TGGIIEGDIYISGYPKRQ-----ETFARISGYCEQN 910 (1194)
Q Consensus 841 ~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~-----~~~~~~G~i~i~g~~~~~-----~~~~~~~gyv~Q~ 910 (1194)
++.+|+|+||++++||++||+||||||||||+++|+|.. . +.+|+|.++|.++.. ..+++.+||++|+
T Consensus 12 ~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~--~~~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~ 89 (227)
T cd03260 12 DKHALKDISLDIPKGEITALIGPSGCGKSTLLRLLNRLNDLIPGA--PDEGEVLLDGKDIYDLDVDVLELRRRVGMVFQK 89 (227)
T ss_pred CceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccccCC--CCCeEEEECCEEhhhcchHHHHHHhhEEEEecC
Confidence 457999999999999999999999999999999999986 4 568999999987532 2345679999999
Q ss_pred CCCCCCCcHHHHHHHHhhhcCCCcCcHHHHHHHHHHHHHHcCCCcccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCEE
Q 000997 911 DIHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIV 990 (1194)
Q Consensus 911 ~~~~~~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~il 990 (1194)
+.++ .+||+||+.+....+.. .......+.++++++.+++.+..+.... +.+||||||||++||++|+.+|++|
T Consensus 90 ~~~~-~~tv~e~l~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~~~~~~~---~~~LSgG~~qrv~la~al~~~p~ll 163 (227)
T cd03260 90 PNPF-PGSIYDNVAYGLRLHGI--KLKEELDERVEEALRKAALWDEVKDRLH---ALGLSGGQQQRLCLARALANEPEVL 163 (227)
T ss_pred chhc-cccHHHHHHhHHHhcCC--CcHHHHHHHHHHHHHHcCCChHHhccCC---cccCCHHHHHHHHHHHHHhcCCCEE
Confidence 8887 79999999886543311 1112234567889999999876554320 2589999999999999999999999
Q ss_pred EEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCeEEEEccCcEEEEeCCCC
Q 000997 991 FMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLG 1055 (1194)
Q Consensus 991 lLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~~ 1055 (1194)
+|||||+|||+.++..+++.|++++++ +|||++||+++ .+.+.||++++|. +|++++.|+..
T Consensus 164 llDEPt~~LD~~~~~~l~~~l~~~~~~-~tii~~sH~~~-~~~~~~d~i~~l~-~G~i~~~g~~~ 225 (227)
T cd03260 164 LLDEPTSALDPISTAKIEELIAELKKE-YTIVIVTHNMQ-QAARVADRTAFLL-NGRLVEFGPTE 225 (227)
T ss_pred EEeCCCccCCHHHHHHHHHHHHHHhhC-cEEEEEeccHH-HHHHhCCEEEEEe-CCEEEEecCcc
Confidence 999999999999999999999999876 99999999986 4667899999998 47899888753
No 122
>PRK10851 sulfate/thiosulfate transporter subunit; Provisional
Probab=100.00 E-value=6.1e-37 Score=354.07 Aligned_cols=210 Identities=27% Similarity=0.384 Sum_probs=177.9
Q ss_pred eeeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCceeeEEEECCccCCCCCC-CceEEEEecCCCCCCCCCH
Q 000997 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVP-PRTSAYVSQQDWQVAEMTV 226 (1194)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lTV 226 (1194)
.++|+|+|++|++||+++|+|||||||||||++|+|.++++ +|+|+++|.++....+ ++.++||+|++.+++++||
T Consensus 15 ~~~l~~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~---~G~I~i~g~~i~~~~~~~r~i~~v~Q~~~l~p~~tv 91 (353)
T PRK10851 15 TQVLNDISLDIPSGQMVALLGPSGSGKTTLLRIIAGLEHQT---SGHIRFHGTDVSRLHARDRKVGFVFQHYALFRHMTV 91 (353)
T ss_pred eEEEEEeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEECCCCCHHHCCEEEEecCcccCCCCcH
Confidence 35999999999999999999999999999999999999876 9999999998765433 3679999999999999999
Q ss_pred HHHHHHhhhccCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhccCcchhHHHHHHHHHhCCcccccccccCccCCC
Q 000997 227 RETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEMLKG 306 (1194)
Q Consensus 227 ~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~k~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~ 306 (1194)
+||+.|+.+......... ..+...+++++++.+||++..|..+ ..
T Consensus 92 ~eni~~~~~~~~~~~~~~------------------------------~~~~~~~~~~~l~~~~L~~~~~~~~-----~~ 136 (353)
T PRK10851 92 FDNIAFGLTVLPRRERPN------------------------------AAAIKAKVTQLLEMVQLAHLADRYP-----AQ 136 (353)
T ss_pred HHHHHhhhhhcccccCCC------------------------------HHHHHHHHHHHHHHcCCchhhhCCh-----hh
Confidence 999999754321000000 0011234788999999988777655 46
Q ss_pred CChhhhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEcCCeE
Q 000997 307 ISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEGQI 386 (1194)
Q Consensus 307 LSGGqkqRvsia~al~~~~~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~~G~i 386 (1194)
|||||||||+|||||+.+|++|+|||||+|||+.++..+.+.|+++.+.. +.+++.++|+..++..++|+|++|++|++
T Consensus 137 LSgGq~QRvalArAL~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~-g~tii~vTHd~~ea~~~~Dri~vl~~G~i 215 (353)
T PRK10851 137 LSGGQKQRVALARALAVEPQILLLDEPFGALDAQVRKELRRWLRQLHEEL-KFTSVFVTHDQEEAMEVADRVVVMSQGNI 215 (353)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHhc-CCEEEEEeCCHHHHHHhCCEEEEEECCEE
Confidence 99999999999999999999999999999999999999999999987643 45566688999999999999999999999
Q ss_pred EEecChhhHH
Q 000997 387 VYQGPRVSVL 396 (1194)
Q Consensus 387 v~~G~~~~~~ 396 (1194)
++.|+++++.
T Consensus 216 ~~~g~~~~i~ 225 (353)
T PRK10851 216 EQAGTPDQVW 225 (353)
T ss_pred EEEcCHHHHH
Confidence 9999998874
No 123
>cd03301 ABC_MalK_N The N-terminal ATPase domain of the maltose transporter, MalK. ATP binding cassette (ABC) proteins function from bacteria to human, mediating the translocation of substances into and out of cells or organelles. ABC transporters contain two transmembrane-spanning domains (TMDs) or subunits and two nucleotide binding domains (NBDs) or subunits that couple transport to the hydrolysis of ATP. In the maltose transport system, the periplasmic maltose binding protein (MBP) stimulates the ATPase activity of the membrane-associated transporter, which consists of two transmembrane subunits, MalF and MalG, and two copies of the ATP binding subunit, MalK, and becomes tightly bound to the transporter in the catalytic transition state, ensuring that maltose is passed to the transporter as ATP is hydrolyzed.
Probab=100.00 E-value=3.7e-37 Score=334.30 Aligned_cols=200 Identities=27% Similarity=0.391 Sum_probs=169.8
Q ss_pred ceEEeeeeeEEEeCCcEEEEEccCCCChHHHHhhhcCCCCCCeeEEEEEEcCccCChh-cccceeeEeecCCCCCCCCcH
Q 000997 841 RLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQE-TFARISGYCEQNDIHSPGLTV 919 (1194)
Q Consensus 841 ~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~-~~~~~~gyv~Q~~~~~~~lTv 919 (1194)
++.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++... ..++.++|++|++.+++..|+
T Consensus 12 ~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~--~~~G~v~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~tv 89 (213)
T cd03301 12 NVTALDDLNLDIADGEFVVLLGPSGCGKTTTLRMIAGLEE--PTSGRIYIGGRDVTDLPPKDRDIAMVFQNYALYPHMTV 89 (213)
T ss_pred CeeeeeceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEECCcCCcccceEEEEecChhhccCCCH
Confidence 3579999999999999999999999999999999999876 4689999999876431 224579999999988889999
Q ss_pred HHHHHHHhhhcCCCcCcHHHHHHHHHHHHHHcCCCcccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCC
Q 000997 920 LESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSGL 999 (1194)
Q Consensus 920 ~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEPTsgL 999 (1194)
+||+.+....+. ....+..+.++++++.+++.+..+..+ ..||||||||++||++|+.+|++|+|||||+||
T Consensus 90 ~~~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qr~~laral~~~p~llllDEPt~~L 161 (213)
T cd03301 90 YDNIAFGLKLRK---VPKDEIDERVREVAELLQIEHLLDRKP-----KQLSGGQRQRVALGRAIVREPKVFLMDEPLSNL 161 (213)
T ss_pred HHHHHHHHHhcC---CCHHHHHHHHHHHHHHcCCHHHHhCCh-----hhCCHHHHHHHHHHHHHhcCCCEEEEcCCcccC
Confidence 999988654321 223344456788999999987766543 579999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCeEEEEccCcEEEEeC
Q 000997 1000 DARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAG 1052 (1194)
Q Consensus 1000 D~~~~~~i~~~l~~l~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g 1052 (1194)
|+.++..+++.|++++++ |+|||+++|+++ ++...+|++++|.+ |++++.|
T Consensus 162 D~~~~~~l~~~l~~~~~~~~~tvi~~sH~~~-~~~~~~d~i~~l~~-g~~~~~g 213 (213)
T cd03301 162 DAKLRVQMRAELKRLQQRLGTTTIYVTHDQV-EAMTMADRIAVMND-GQIQQIG 213 (213)
T ss_pred CHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhcCeEEEEEC-CEEEecC
Confidence 999999999999999864 899999999976 46678999999985 7888765
No 124
>COG1122 CbiO ABC-type cobalt transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.5e-37 Score=332.83 Aligned_cols=207 Identities=27% Similarity=0.385 Sum_probs=180.4
Q ss_pred eeeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCceeeEEEECCccCC----CCCCCceEEEEecCC-CCCC
Q 000997 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFK----EFVPPRTSAYVSQQD-WQVA 222 (1194)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~----~~~~~~~~~yv~Q~d-~~~~ 222 (1194)
..+|+|+|+.|++|+.++|+||||||||||+++|+|++.|. +|+|.++|.+.. ....++.+|||+|+| .++.
T Consensus 17 ~~~l~~v~~~i~~Ge~~~i~G~nGsGKSTL~~~l~GLl~p~---~G~v~~~g~~~~~~~~~~~~~~~vG~VfQnpd~q~~ 93 (235)
T COG1122 17 KAALKDVSLEIEKGERVLLIGPNGSGKSTLLKLLNGLLKPT---SGEVLVDGLDTSSEKSLLELRQKVGLVFQNPDDQLF 93 (235)
T ss_pred ceeeeeeEEEECCCCEEEEECCCCCCHHHHHHHHcCcCcCC---CCEEEECCeeccchhhHHHhhcceEEEEECcccccc
Confidence 57999999999999999999999999999999999999886 899999998865 223568899999996 4577
Q ss_pred CCCHHHHHHHhhhccCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhccCcchhHHHHHHHHHhCCcccccccccCc
Q 000997 223 EMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDE 302 (1194)
Q Consensus 223 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~k~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~ 302 (1194)
.-||.|.++|+.+..+... .+.+.+++.+++.+||.+.++..
T Consensus 94 ~~tV~~evafg~~n~g~~~----------------------------------~e~~~rv~~~l~~vgl~~~~~r~---- 135 (235)
T COG1122 94 GPTVEDEVAFGLENLGLPR----------------------------------EEIEERVAEALELVGLEELLDRP---- 135 (235)
T ss_pred cCcHHHHHhhchhhcCCCH----------------------------------HHHHHHHHHHHHHcCchhhccCC----
Confidence 7899999999987665321 01234689999999999987754
Q ss_pred cCCCCChhhhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEc
Q 000997 303 MLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLS 382 (1194)
Q Consensus 303 ~~~~LSGGqkqRvsia~al~~~~~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~ 382 (1194)
+..|||||||||+||.+|+.+|++|+|||||||||+..+.++++.++++... ++.++|.++|+.+.+.+++|++++|+
T Consensus 136 -p~~LSGGqkqRvaIA~vLa~~P~iliLDEPta~LD~~~~~~l~~~l~~L~~~-~~~tii~~tHd~~~~~~~ad~v~vl~ 213 (235)
T COG1122 136 -PFNLSGGQKQRVAIAGVLAMGPEILLLDEPTAGLDPKGRRELLELLKKLKEE-GGKTIIIVTHDLELVLEYADRVVVLD 213 (235)
T ss_pred -ccccCCcceeeHHhhHHHHcCCCEEEEcCCCCCCCHHHHHHHHHHHHHHHhc-CCCeEEEEeCcHHHHHhhCCEEEEEE
Confidence 4579999999999999999999999999999999999999999999999864 34566668999999999999999999
Q ss_pred CCeEEEecChhhHHH
Q 000997 383 EGQIVYQGPRVSVLD 397 (1194)
Q Consensus 383 ~G~iv~~G~~~~~~~ 397 (1194)
+|+++++|++.++..
T Consensus 214 ~G~i~~~g~p~~i~~ 228 (235)
T COG1122 214 DGKILADGDPAEIFN 228 (235)
T ss_pred CCEEeecCCHHHHhh
Confidence 999999999877643
No 125
>cd03296 ABC_CysA_sulfate_importer Part of the ABC transporter complex cysAWTP involved in sulfate import. Responsible for energy coupling to the transport system. The complex is composed of two ATP-binding proteins (cysA), two transmembrane proteins (cysT and cysW), and a solute-binding protein (cysP). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=4.5e-37 Score=339.46 Aligned_cols=205 Identities=28% Similarity=0.379 Sum_probs=171.7
Q ss_pred ceEEeeeeeEEEeCCcEEEEEccCCCChHHHHhhhcCCCCCCeeEEEEEEcCccCChh-cccceeeEeecCCCCCCCCcH
Q 000997 841 RLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQE-TFARISGYCEQNDIHSPGLTV 919 (1194)
Q Consensus 841 ~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~-~~~~~~gyv~Q~~~~~~~lTv 919 (1194)
++.+|+|||+++++||++||+||||||||||+++|+|... +.+|+|.++|.++... ..++.++|++|++.+++.+||
T Consensus 14 ~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~~~~~~~~~i~~v~q~~~~~~~~tv 91 (239)
T cd03296 14 DFVALDDVSLDIPSGELVALLGPSGSGKTTLLRLIAGLER--PDSGTILFGGEDATDVPVQERNVGFVFQHYALFRHMTV 91 (239)
T ss_pred CEEeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEECCcCCccccceEEEecCCcccCCCCH
Confidence 4579999999999999999999999999999999999876 4689999999876432 224578999999988889999
Q ss_pred HHHHHHHhhhcCC-CcCcHHHHHHHHHHHHHHcCCCcccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCC
Q 000997 920 LESLLFSAWLRLP-SEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSG 998 (1194)
Q Consensus 920 ~e~l~f~~~lr~~-~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEPTsg 998 (1194)
+||+.+....+.. .........+.++++++.+++.+..+..+ ..|||||||||+||+||+.+|++|+|||||+|
T Consensus 92 ~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrl~la~al~~~p~llllDEP~~~ 166 (239)
T cd03296 92 FDNVAFGLRVKPRSERPPEAEIRAKVHELLKLVQLDWLADRYP-----AQLSGGQRQRVALARALAVEPKVLLLDEPFGA 166 (239)
T ss_pred HHHHhhhhhhccccccCCHHHHHHHHHHHHHHcCChhhhhcCh-----hhCCHHHHHHHHHHHHHhcCCCEEEEcCCccc
Confidence 9999886543211 00122233456788999999977666543 57999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCeEEEEccCcEEEEeCCC
Q 000997 999 LDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1194)
Q Consensus 999 LD~~~~~~i~~~l~~l~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~ 1054 (1194)
||+.++..+.+.|++++++ |+|||+++|+++ ++.+.+|++++|+ +|++++.|+.
T Consensus 167 LD~~~~~~l~~~l~~~~~~~~~tvii~sH~~~-~~~~~~d~i~~l~-~G~i~~~~~~ 221 (239)
T cd03296 167 LDAKVRKELRRWLRRLHDELHVTTVFVTHDQE-EALEVADRVVVMN-KGRIEQVGTP 221 (239)
T ss_pred CCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCEEEEEE-CCeEEEecCH
Confidence 9999999999999999865 899999999986 4677899999998 5789988875
No 126
>COG0410 LivF ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=1.7e-37 Score=321.63 Aligned_cols=209 Identities=27% Similarity=0.362 Sum_probs=174.2
Q ss_pred cccccccceEEeeeeeEEEeCCcEEEEEccCCCChHHHHhhhcCCCCCCeeEEEEEEcCccCCh----hcccceeeEeec
Q 000997 834 QEGVLEDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ----ETFARISGYCEQ 909 (1194)
Q Consensus 834 ~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~----~~~~~~~gyv~Q 909 (1194)
+....|++.++|++||+++++||+++|+|||||||||||++|+|..+ +.+|+|.++|.+++. +..++-++||||
T Consensus 8 ~l~~~YG~~~~L~gvsl~v~~Geiv~llG~NGaGKTTlLkti~Gl~~--~~~G~I~~~G~dit~~p~~~r~r~Gi~~VPe 85 (237)
T COG0410 8 NLSAGYGKIQALRGVSLEVERGEIVALLGRNGAGKTTLLKTIMGLVR--PRSGRIIFDGEDITGLPPHERARLGIAYVPE 85 (237)
T ss_pred eEeecccceeEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCeeEEECCeecCCCCHHHHHhCCeEeCcc
Confidence 33445677899999999999999999999999999999999999876 458999999998753 345677999999
Q ss_pred CCCCCCCCcHHHHHHHHhhhcCCCcCcHHHHHHHHHHHHHHcC-CCcccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCC
Q 000997 910 NDIHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVE-LTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPS 988 (1194)
Q Consensus 910 ~~~~~~~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~-l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~ 988 (1194)
....||.+||+|||..++..+.. .......++++.+++- |.+.++..- ..|||||||.|+|||||+.+|+
T Consensus 86 gR~iF~~LTVeENL~~g~~~~~~----~~~~~~~~e~v~~lFP~Lker~~~~a-----G~LSGGEQQMLAiaRALm~~Pk 156 (237)
T COG0410 86 GRRIFPRLTVEENLLLGAYARRD----KEAQERDLEEVYELFPRLKERRNQRA-----GTLSGGEQQMLAIARALMSRPK 156 (237)
T ss_pred cccchhhCcHHHHHhhhhhcccc----cccccccHHHHHHHChhHHHHhcCcc-----cCCChHHHHHHHHHHHHhcCCC
Confidence 99999999999999988654422 1111122666776653 444455443 4799999999999999999999
Q ss_pred EEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCeEEEEccCcEEEEeCCCC
Q 000997 989 IVFMDEPTSGLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLG 1055 (1194)
Q Consensus 989 illLDEPTsgLD~~~~~~i~~~l~~l~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~~ 1055 (1194)
+|+|||||.||-|.-...|.+.|+++.++ |.||+++-+... ...+.+||.++|. .|++++.|+..
T Consensus 157 lLLLDEPs~GLaP~iv~~I~~~i~~l~~~~g~tIlLVEQn~~-~Al~iaDr~yvle-~Griv~~G~~~ 222 (237)
T COG0410 157 LLLLDEPSEGLAPKIVEEIFEAIKELRKEGGMTILLVEQNAR-FALEIADRGYVLE-NGRIVLSGTAA 222 (237)
T ss_pred EEEecCCccCcCHHHHHHHHHHHHHHHHcCCcEEEEEeccHH-HHHHhhCEEEEEe-CCEEEEecCHH
Confidence 99999999999999999999999999866 789999998865 4668899999998 58999999864
No 127
>cd03266 ABC_NatA_sodium_exporter NatA is the ATPase component of a bacterial ABC-type Na+ transport system called NatAB, which catalyzes ATP-dependent electrogenic Na+ extrusion without mechanically coupled proton or K+ uptake. NatB possess six putative membrane spanning regions at its C-terminus. In B. subtilus, NatAB is inducible by agents such as ethanol and protonophores, which lower the protonmotive force across the membrane. The closest sequence similarity to NatA is exhibited by DrrA of the two-component daunomycin- and doxorubicin-efflux system. Hence, the functional NatAB is presumably assembled with two copies of a single ATP-binding protein and a single intergral membrane protein.
Probab=100.00 E-value=3e-37 Score=336.17 Aligned_cols=198 Identities=28% Similarity=0.428 Sum_probs=170.3
Q ss_pred EEeeeeeEEEeCCcEEEEEccCCCChHHHHhhhcCCCCCCeeEEEEEEcCccCCh--hcccceeeEeecCCCCCCCCcHH
Q 000997 843 QLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ--ETFARISGYCEQNDIHSPGLTVL 920 (1194)
Q Consensus 843 ~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~--~~~~~~~gyv~Q~~~~~~~lTv~ 920 (1194)
.+|+|+|+++++||+++|+|+||||||||+++|+|..+ +.+|+|.++|.++.. ..+++.+||++|++.+++.+||+
T Consensus 19 ~il~~~sl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~ 96 (218)
T cd03266 19 QAVDGVSFTVKPGEVTGLLGPNGAGKTTTLRMLAGLLE--PDAGFATVDGFDVVKEPAEARRRLGFVSDSTGLYDRLTAR 96 (218)
T ss_pred eeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcC--CCCceEEECCEEcccCHHHHHhhEEEecCCcccCcCCCHH
Confidence 69999999999999999999999999999999999876 468999999987642 23456799999999888999999
Q ss_pred HHHHHHhhhcCCCcCcHHHHHHHHHHHHHHcCCCcccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCC
Q 000997 921 ESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSGLD 1000 (1194)
Q Consensus 921 e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEPTsgLD 1000 (1194)
||+.+....+. ....+..+.++++++.+++.+..+..+ ..||||||||++|||||+.+|++|+|||||+|||
T Consensus 97 e~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrv~laral~~~p~illlDEPt~~LD 168 (218)
T cd03266 97 ENLEYFAGLYG---LKGDELTARLEELADRLGMEELLDRRV-----GGFSTGMRQKVAIARALVHDPPVLLLDEPTTGLD 168 (218)
T ss_pred HHHHHHHHHcC---CCHHHHHHHHHHHHHHcCCHHHHhhhh-----hhcCHHHHHHHHHHHHHhcCCCEEEEcCCCcCCC
Confidence 99987654331 223344567789999999987766543 5799999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCeEEEEccCcEEEEeC
Q 000997 1001 ARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAG 1052 (1194)
Q Consensus 1001 ~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g 1052 (1194)
+.++..+.+.|+++.++|+|||++||+++ ++...+|++++|++ |++++.|
T Consensus 169 ~~~~~~l~~~l~~~~~~~~tii~~tH~~~-~~~~~~d~i~~l~~-G~i~~~~ 218 (218)
T cd03266 169 VMATRALREFIRQLRALGKCILFSTHIMQ-EVERLCDRVVVLHR-GRVVYEG 218 (218)
T ss_pred HHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhcCEEEEEEC-CEEeecC
Confidence 99999999999999777999999999986 56778999999985 7877654
No 128
>cd03226 ABC_cobalt_CbiO_domain2 Domain II of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. The CbiMNQO family ABC transport system is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=100.00 E-value=2.5e-37 Score=333.45 Aligned_cols=192 Identities=28% Similarity=0.384 Sum_probs=163.2
Q ss_pred eEEeeeeeEEEeCCcEEEEEccCCCChHHHHhhhcCCCCCCeeEEEEEEcCccCChhcccceeeEeecCCC-CCCCCcHH
Q 000997 842 LQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQETFARISGYCEQNDI-HSPGLTVL 920 (1194)
Q Consensus 842 ~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~~~~~~~gyv~Q~~~-~~~~lTv~ 920 (1194)
+.+|+|+||++++||+++|+|||||||||||++|+|..+ +.+|+|.++|.++.....++.+||++|++. .+..+|++
T Consensus 13 ~~~l~~v~~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~~~~~~~~~~i~~~~q~~~~~~~~~tv~ 90 (205)
T cd03226 13 TEILDDLSLDLYAGEIIALTGKNGAGKTTLAKILAGLIK--ESSGSILLNGKPIKAKERRKSIGYVMQDVDYQLFTDSVR 90 (205)
T ss_pred CceeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCceEEEECCEEhhhHHhhcceEEEecChhhhhhhccHH
Confidence 569999999999999999999999999999999999876 468999999987654445667999999974 33467999
Q ss_pred HHHHHHhhhcCCCcCcHHHHHHHHHHHHHHcCCCcccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCC
Q 000997 921 ESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSGLD 1000 (1194)
Q Consensus 921 e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEPTsgLD 1000 (1194)
||+.+...... . ..+.++++++.+++.+..+..+ ..||||||||++|||+|+.+|++|+|||||+|||
T Consensus 91 e~l~~~~~~~~-----~--~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrv~laral~~~p~llllDEPt~~LD 158 (205)
T cd03226 91 EELLLGLKELD-----A--GNEQAETVLKDLDLYALKERHP-----LSLSGGQKQRLAIAAALLSGKDLLIFDEPTSGLD 158 (205)
T ss_pred HHHhhhhhhcC-----c--cHHHHHHHHHHcCCchhcCCCc-----hhCCHHHHHHHHHHHHHHhCCCEEEEeCCCccCC
Confidence 99987543221 1 1245788999999987776653 5899999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCeEEEEccCcEEE
Q 000997 1001 ARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELI 1049 (1194)
Q Consensus 1001 ~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~ 1049 (1194)
+.++..+.+.|++++++|+|||++||+++ ++.+.+|++++|.+ |+++
T Consensus 159 ~~~~~~l~~~l~~~~~~~~tii~~sH~~~-~~~~~~d~i~~l~~-G~iv 205 (205)
T cd03226 159 YKNMERVGELIRELAAQGKAVIVITHDYE-FLAKVCDRVLLLAN-GAIV 205 (205)
T ss_pred HHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEC
Confidence 99999999999999777999999999986 46678999999985 6653
No 129
>cd03268 ABC_BcrA_bacitracin_resist The BcrA subfamily represents ABC transporters involved in peptide antibiotic resistance. Bacitracin is a dodecapeptide antibiotic produced by B. licheniformis and B. subtilis. The synthesis of bacitracin is non-ribosomally catalyzed by a multienzyme complex BcrABC. Bacitracin has potent antibiotic activity against gram-positive bacteria. The inhibition of peptidoglycan biosynthesis is the best characterized bacterial effect of bacitracin. The bacitracin resistance of B. licheniformis is mediated by the ABC transporter Bcr which is composed of two identical BcrA ATP-binding subunits and one each of the integral membrane proteins, BcrB and BcrC. B. subtilis cells carrying bcr genes on high-copy number plasmids develop collateral detergent sensitivity, a similar phenomenon in human cells with overexpressed multi-drug resistance P-glycoprotein.
Probab=100.00 E-value=3.2e-37 Score=333.46 Aligned_cols=196 Identities=28% Similarity=0.416 Sum_probs=168.2
Q ss_pred ceEEeeeeeEEEeCCcEEEEEccCCCChHHHHhhhcCCCCCCeeEEEEEEcCccCCh-hcccceeeEeecCCCCCCCCcH
Q 000997 841 RLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ-ETFARISGYCEQNDIHSPGLTV 919 (1194)
Q Consensus 841 ~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~-~~~~~~~gyv~Q~~~~~~~lTv 919 (1194)
++.+|+|+||++++|++++|+||||||||||+++|+|..+ +.+|+|.++|.++.. ...++.++||+|++.+++.+|+
T Consensus 12 ~~~~l~~~~~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~tv 89 (208)
T cd03268 12 KKRVLDDISLHVKKGEIYGFLGPNGAGKTTTMKIILGLIK--PDSGEITFDGKSYQKNIEALRRIGALIEAPGFYPNLTA 89 (208)
T ss_pred CeEeEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcC--CCceEEEECCCcccchHHHHhhEEEecCCCccCccCcH
Confidence 4579999999999999999999999999999999999876 468999999987642 2345679999999988899999
Q ss_pred HHHHHHHhhhcCCCcCcHHHHHHHHHHHHHHcCCCcccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCC
Q 000997 920 LESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSGL 999 (1194)
Q Consensus 920 ~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEPTsgL 999 (1194)
+||+.+....+. . ..+.++++++.+++.+..+..+ ..|||||||||+||++|+.+|++|+|||||+||
T Consensus 90 ~e~l~~~~~~~~---~----~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrv~la~al~~~p~llllDEPt~~L 157 (208)
T cd03268 90 RENLRLLARLLG---I----RKKRIDEVLDVVGLKDSAKKKV-----KGFSLGMKQRLGIALALLGNPDLLILDEPTNGL 157 (208)
T ss_pred HHHHHHHHHhcC---C----cHHHHHHHHHHcCCHHHHhhhH-----hhCCHHHHHHHHHHHHHhcCCCEEEECCCcccC
Confidence 999988654321 1 1345788899999987766543 579999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCeEEEEccCcEEEEeC
Q 000997 1000 DARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAG 1052 (1194)
Q Consensus 1000 D~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g 1052 (1194)
|+.++..+++.|++++++|+|||+++|++. .+.+.+|++++|++ |++++.|
T Consensus 158 D~~~~~~l~~~l~~~~~~~~tii~~tH~~~-~~~~~~d~v~~l~~-g~i~~~g 208 (208)
T cd03268 158 DPDGIKELRELILSLRDQGITVLISSHLLS-EIQKVADRIGIINK-GKLIEEG 208 (208)
T ss_pred CHHHHHHHHHHHHHHHHCCCEEEEEcCCHH-HHHHhcCEEEEEEC-CEEEecC
Confidence 999999999999999878999999999986 46678999999984 7887654
No 130
>cd03255 ABC_MJ0796_Lo1CDE_FtsE This family is comprised of MJ0796 ATP-binding cassette, macrolide-specific ABC-type efflux carrier (MacAB), and proteins involved in cell division (FtsE), and release of liporoteins from the cytoplasmic membrane (LolCDE). They are clustered together phylogenetically. MacAB is an exporter that confers resistance to macrolides, while the LolCDE system is not a transporter at all. An FtsE null mutants showed filamentous growth and appeared viable on high salt medium only, indicating a role for FtsE in cell division and/or salt transport. The LolCDE complex catalyses the release of lipoproteins from the cytoplasmic membrane prior to their targeting to the outer membrane.
Probab=100.00 E-value=3.9e-37 Score=335.31 Aligned_cols=193 Identities=31% Similarity=0.449 Sum_probs=164.6
Q ss_pred eEEeeeeeEEEeCCcEEEEEccCCCChHHHHhhhcCCCCCCeeEEEEEEcCccCChh------c-ccceeeEeecCCCCC
Q 000997 842 LQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQE------T-FARISGYCEQNDIHS 914 (1194)
Q Consensus 842 ~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~------~-~~~~~gyv~Q~~~~~ 914 (1194)
+.+|+|+||++++||++||+||||||||||+++|+|..+ +.+|+|.++|.++... . .++.++|++|++.++
T Consensus 17 ~~il~~~s~~i~~G~~~~l~G~nGsGKSTLl~~i~Gl~~--~~~G~i~~~g~~~~~~~~~~~~~~~~~~i~~~~q~~~~~ 94 (218)
T cd03255 17 VQALKGVSLSIEKGEFVAIVGPSGSGKSTLLNILGGLDR--PTSGEVRVDGTDISKLSEKELAAFRRRHIGFVFQSFNLL 94 (218)
T ss_pred eeEEeeeEEEEcCCCEEEEEcCCCCCHHHHHHHHhCCcC--CCceeEEECCEehhhcchhHHHHHHhhcEEEEeeccccC
Confidence 579999999999999999999999999999999999876 4689999999876421 1 245799999999999
Q ss_pred CCCcHHHHHHHHhhhcCCCcCcHHHHHHHHHHHHHHcCCCcccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeC
Q 000997 915 PGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDE 994 (1194)
Q Consensus 915 ~~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illLDE 994 (1194)
+.+||+||+.+....+. .......+.++++++.+++.+..+..+ ..||||||||++|||+|+.+|+||+|||
T Consensus 95 ~~~tv~e~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrv~la~al~~~p~lllLDE 166 (218)
T cd03255 95 PDLTALENVELPLLLAG---VPKKERRERAEELLERVGLGDRLNHYP-----SELSGGQQQRVAIARALANDPKIILADE 166 (218)
T ss_pred CCCcHHHHHHHHHhhcC---CCHHHHHHHHHHHHHHcCCchhhhcCh-----hhcCHHHHHHHHHHHHHccCCCEEEEcC
Confidence 99999999998765432 122334456889999999987666543 5799999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCCcHHHHHhcCeEEEEccCcE
Q 000997 995 PTSGLDARAAAIVMRTVRNIVN-TGRTIVCTIHQPSIDIFESFDELLFMKRGGE 1047 (1194)
Q Consensus 995 PTsgLD~~~~~~i~~~l~~l~~-~g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~ 1047 (1194)
||+|||+.++..+.+.|+++++ .|+|||+++|+++. + +.||++++|++ |+
T Consensus 167 P~~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~-~-~~~d~v~~l~~-G~ 217 (218)
T cd03255 167 PTGNLDSETGKEVMELLRELNKEAGTTIVVVTHDPEL-A-EYADRIIELRD-GK 217 (218)
T ss_pred CcccCCHHHHHHHHHHHHHHHHhcCCeEEEEECCHHH-H-hhhcEEEEeeC-Cc
Confidence 9999999999999999999977 59999999999863 4 48999999985 54
No 131
>cd03256 ABC_PhnC_transporter ABC-type phosphate/phosphonate transport system. Phosphonates are a class of organophosphorus compounds characterized by a chemically stable carbon-to-phosphorus (C-P) bond. Phosphonates are widespread among naturally occurring compounds in all kingdoms of wildlife, but only procaryotic microorganisms are able to cleave this bond. Certain bacteria such as E. coli can use alkylphosphonates as a phosphorus source. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=5.2e-37 Score=339.75 Aligned_cols=204 Identities=28% Similarity=0.378 Sum_probs=170.1
Q ss_pred eEEeeeeeEEEeCCcEEEEEccCCCChHHHHhhhcCCCCCCeeEEEEEEcCccCCh------hcccceeeEeecCCCCCC
Q 000997 842 LQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ------ETFARISGYCEQNDIHSP 915 (1194)
Q Consensus 842 ~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~------~~~~~~~gyv~Q~~~~~~ 915 (1194)
+.+|+|+|+++++||++||+||||||||||+++|+|..+ +.+|+|.++|.++.. ...++.++|++|++.+++
T Consensus 14 ~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~~~~~~~~~~~~~~i~~~~q~~~~~~ 91 (241)
T cd03256 14 KKALKDVSLSINPGEFVALIGPSGAGKSTLLRCLNGLVE--PTSGSVLIDGTDINKLKGKALRQLRRQIGMIFQQFNLIE 91 (241)
T ss_pred cEEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcC--CCCceEEECCEeccccCHhHHHHHHhccEEEcccCcccc
Confidence 579999999999999999999999999999999999876 468999999987642 234567999999999889
Q ss_pred CCcHHHHHHHHhhhcC-----CCcCcHHHHHHHHHHHHHHcCCCcccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCEE
Q 000997 916 GLTVLESLLFSAWLRL-----PSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIV 990 (1194)
Q Consensus 916 ~lTv~e~l~f~~~lr~-----~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~il 990 (1194)
.+||+||+.+...... ..........+.+.++++.+++.+..+.. +..|||||||||+||++|+.+|+||
T Consensus 92 ~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~G~~qrv~la~al~~~p~ll 166 (241)
T cd03256 92 RLSVLENVLSGRLGRRSTWRSLFGLFPKEEKQRALAALERVGLLDKAYQR-----ADQLSGGQQQRVAIARALMQQPKLI 166 (241)
T ss_pred cCcHHHHHHhhhcccchhhhhhcccCcHHHHHHHHHHHHHcCChhhhCCC-----cccCCHHHHHHHHHHHHHhcCCCEE
Confidence 9999999987532100 00111123345678889999997766554 3589999999999999999999999
Q ss_pred EEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCeEEEEccCcEEEEeCCC
Q 000997 991 FMDEPTSGLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1194)
Q Consensus 991 lLDEPTsgLD~~~~~~i~~~l~~l~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~ 1054 (1194)
+|||||+|||+.++..+++.|++++++ |+|||+++|+++ ++...+|++++|. +|++++.|+.
T Consensus 167 llDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~tH~~~-~~~~~~d~v~~l~-~G~i~~~~~~ 229 (241)
T cd03256 167 LADEPVASLDPASSRQVMDLLKRINREEGITVIVSLHQVD-LAREYADRIVGLK-DGRIVFDGPP 229 (241)
T ss_pred EEeCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEE-CCEEEeecCH
Confidence 999999999999999999999999764 899999999987 4667899999998 4789988875
No 132
>cd03258 ABC_MetN_methionine_transporter MetN (also known as YusC) is an ABC-type transporter encoded by metN of the metNPQ operon in Bacillus subtilis that is involved in methionine transport. Other members of this system include the MetP permease and the MetQ substrate binding protein. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=6e-37 Score=337.32 Aligned_cols=200 Identities=27% Similarity=0.341 Sum_probs=171.8
Q ss_pred EEeeeeeEEEeCCcEEEEEccCCCChHHHHhhhcCCCCCCeeEEEEEEcCccCChh------cccceeeEeecCCCCCCC
Q 000997 843 QLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQE------TFARISGYCEQNDIHSPG 916 (1194)
Q Consensus 843 ~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~------~~~~~~gyv~Q~~~~~~~ 916 (1194)
.+|+|+|+++++||++||+||||||||||+++|+|..+ +.+|+|.++|.++... ..++.++|++|++.+++.
T Consensus 19 ~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~~~~~~~~~~~~~i~~~~q~~~~~~~ 96 (233)
T cd03258 19 TALKDVSLSVPKGEIFGIIGRSGAGKSTLIRCINGLER--PTSGSVLVDGTDLTLLSGKELRKARRRIGMIFQHFNLLSS 96 (233)
T ss_pred eeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEEcccCCHHHHHHHHhheEEEccCcccCCC
Confidence 79999999999999999999999999999999999876 4689999999876421 235679999999999999
Q ss_pred CcHHHHHHHHhhhcCCCcCcHHHHHHHHHHHHHHcCCCcccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCC
Q 000997 917 LTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPT 996 (1194)
Q Consensus 917 lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEPT 996 (1194)
+|++||+.+....+. .......+.++++++.+++.+..+... ..||||||||++||++|+.+|++|+|||||
T Consensus 97 ~t~~e~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrv~la~al~~~p~lllLDEP~ 168 (233)
T cd03258 97 RTVFENVALPLEIAG---VPKAEIEERVLELLELVGLEDKADAYP-----AQLSGGQKQRVGIARALANNPKVLLCDEAT 168 (233)
T ss_pred CcHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHCCChhhhhcCh-----hhCCHHHHHHHHHHHHHhcCCCEEEecCCC
Confidence 999999988654332 223334456788999999987766543 579999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCeEEEEccCcEEEEeCCC
Q 000997 997 SGLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1194)
Q Consensus 997 sgLD~~~~~~i~~~l~~l~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~ 1054 (1194)
+|||+.++..+.+.|++++++ |+|||+++|+++ .+.+.+|++++|+ +|++++.|+.
T Consensus 169 ~~LD~~~~~~l~~~l~~~~~~~~~tvii~sH~~~-~~~~~~d~i~~l~-~G~i~~~~~~ 225 (233)
T cd03258 169 SALDPETTQSILALLRDINRELGLTIVLITHEME-VVKRICDRVAVME-KGEVVEEGTV 225 (233)
T ss_pred CcCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCEEEEEE-CCEEEEecCH
Confidence 999999999999999999765 899999999976 4667899999998 5899988864
No 133
>KOG0062 consensus ATPase component of ABC transporters with duplicated ATPase domains/Translation elongation factor EF-3b [Amino acid transport and metabolism; Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=5.1e-37 Score=345.85 Aligned_cols=186 Identities=22% Similarity=0.221 Sum_probs=139.2
Q ss_pred EEeeeeeEEEeCCcEEEEEccCCCChHHHHhhhcCCCCCCeeEEEEEEcCccCChhcccceeeEeecCCCCCCCCcHHHH
Q 000997 843 QLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQETFARISGYCEQNDIHSPGLTVLES 922 (1194)
Q Consensus 843 ~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~~~~~~~gyv~Q~~~~~~~lTv~e~ 922 (1194)
+++.+++..+..-+..+++|+||+||||+++++.|... +..|-+.+.+ +++++|-.|..+-+-.+.|-+-
T Consensus 378 ~~~~~~~~d~e~~sRi~~vg~ng~gkst~lKi~~~~l~--~~rgi~~~~~--------r~ri~~f~Qhhvd~l~~~v~~v 447 (582)
T KOG0062|consen 378 QWRKQLGLDRESDSRISRVGENGDGKSTLLKILKGDLT--PTRGIVGRHP--------RLRIKYFAQHHVDFLDKNVNAV 447 (582)
T ss_pred hhhhccCCccchhhhhheeccCchhHHHHHHHHhccCC--cccceeeecc--------cceecchhHhhhhHHHHHhHHH
Confidence 67889999999999999999999999999999998654 3567766654 3568999997654444444332
Q ss_pred HHHHhhhcCCCcCcHHHHHHHHHHHHHHcCCCcccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHH
Q 000997 923 LLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSGLDAR 1002 (1194)
Q Consensus 923 l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEPTsgLD~~ 1002 (1194)
.+-...+ |.. . .+..++-+..+||..-. .-. .+.+||||||-||++|.....+|.+|+|||||+.||..
T Consensus 448 -d~~~~~~-pG~-~----~ee~r~hl~~~Gl~g~l---a~~-si~~LSGGQKsrvafA~~~~~~PhlLVLDEPTNhLD~d 516 (582)
T KOG0062|consen 448 -DFMEKSF-PGK-T----EEEIRRHLGSFGLSGEL---ALQ-SIASLSGGQKSRVAFAACTWNNPHLLVLDEPTNHLDRD 516 (582)
T ss_pred -HHHHHhC-CCC-C----HHHHHHHHHhcCCCchh---hhc-cccccCCcchhHHHHHHHhcCCCcEEEecCCCccccHH
Confidence 2222222 221 2 23355667778876421 111 25689999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCeEEEEccCcEEEEeCC
Q 000997 1003 AAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGP 1053 (1194)
Q Consensus 1003 ~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~ 1053 (1194)
+-..+-+.|+++ +..|||++|+-+. +-..|+.+.+.++|...-+.|.
T Consensus 517 sl~AL~~Al~~F---~GGVv~VSHd~~f-i~~~c~E~Wvve~g~vt~ieg~ 563 (582)
T KOG0062|consen 517 SLGALAKALKNF---NGGVVLVSHDEEF-ISSLCKELWVVEDGKVTPIEGG 563 (582)
T ss_pred HHHHHHHHHHhc---CCcEEEEECcHHH-HhhcCceeEEEcCCcEEeeecc
Confidence 999999999885 4589999999653 6667999999986544445554
No 134
>cd03294 ABC_Pro_Gly_Bertaine This family comprises the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporters is the obligatory coupling of ATP hydrolysis to substrate translocation. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=7.6e-37 Score=342.93 Aligned_cols=209 Identities=23% Similarity=0.274 Sum_probs=175.8
Q ss_pred cccccccceEEeeeeeEEEeCCcEEEEEccCCCChHHHHhhhcCCCCCCeeEEEEEEcCccCCh---hc----ccceeeE
Q 000997 834 QEGVLEDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ---ET----FARISGY 906 (1194)
Q Consensus 834 ~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~---~~----~~~~~gy 906 (1194)
+..+.++.+.+|+|+|+++++|++++|+||||||||||+++|+|..+ +.+|+|.++|.++.. .. .++.+||
T Consensus 29 ~~~~~~~~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~L~Gl~~--p~~G~i~i~g~~~~~~~~~~~~~~~~~~i~~ 106 (269)
T cd03294 29 EILKKTGQTVGVNDVSLDVREGEIFVIMGLSGSGKSTLLRCINRLIE--PTSGKVLIDGQDIAAMSRKELRELRRKKISM 106 (269)
T ss_pred hhhhhcCCceEeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCeEEEECCEEccccChhhhhhhhcCcEEE
Confidence 33444567789999999999999999999999999999999999876 468999999987542 11 2357999
Q ss_pred eecCCCCCCCCcHHHHHHHHhhhcCCCcCcHHHHHHHHHHHHHHcCCCcccCCcccCCCCCCCCHHHHHHHHHHHHHhhC
Q 000997 907 CEQNDIHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVAN 986 (1194)
Q Consensus 907 v~Q~~~~~~~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~ 986 (1194)
++|++.+++.+|++||+.+...... .......+.++++++.+++.+..+..+ ..||||||||++||+||+.+
T Consensus 107 v~q~~~~~~~~tv~e~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~Gq~qrv~lAral~~~ 178 (269)
T cd03294 107 VFQSFALLPHRTVLENVAFGLEVQG---VPRAEREERAAEALELVGLEGWEHKYP-----DELSGGMQQRVGLARALAVD 178 (269)
T ss_pred EecCcccCCCCcHHHHHHHHHHhcC---CCHHHHHHHHHHHHHHcCCHhHhhCCc-----ccCCHHHHHHHHHHHHHhcC
Confidence 9999999989999999988654321 222334456788999999987766653 57999999999999999999
Q ss_pred CCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCeEEEEccCcEEEEeCCC
Q 000997 987 PSIVFMDEPTSGLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1194)
Q Consensus 987 p~illLDEPTsgLD~~~~~~i~~~l~~l~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~ 1054 (1194)
|+||+|||||+|||+.++..+.+.|++++++ |+|||++||+++ ++.+.+|++++|+ +|++++.|+.
T Consensus 179 p~illLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiii~tH~~~-~~~~~~d~v~~l~-~G~i~~~g~~ 245 (269)
T cd03294 179 PDILLMDEAFSALDPLIRREMQDELLRLQAELQKTIVFITHDLD-EALRLGDRIAIMK-DGRLVQVGTP 245 (269)
T ss_pred CCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhcCEEEEEE-CCEEEEeCCH
Confidence 9999999999999999999999999999754 899999999976 4677899999998 5789988875
No 135
>cd03234 ABCG_White The White subfamily represents ABC transporters homologous to the Drosophila white gene, which acts as a dimeric importer for eye pigment precursors. The eye pigmentation of Drosophila is developed from the synthesis and deposition in the cells of red pigments, which are synthesized from guanine, and brown pigments, which are synthesized from tryptophan. The pigment precursors are encoded by the white, brown, and scarlet genes, respectively. Evidence from genetic and biochemical studies suggest that the White and Brown proteins function as heterodimers to import guanine, while the White and Scarlet proteins function to import tryptophan. However, a recent study also suggests that White may be involved in the transport of a metabolite, such as 3-hydroxykynurenine, across intracellular membranes. Mammalian ABC transporters belonging to the White subfamily (ABCG1, ABCG5, and ABCG8) have been shown to be involved in the regulation of lipid-trafficking mechanisms in
Probab=100.00 E-value=1.5e-36 Score=332.32 Aligned_cols=206 Identities=38% Similarity=0.705 Sum_probs=172.0
Q ss_pred ceEEeeeeeEEEeCCcEEEEEccCCCChHHHHhhhcCCCC-CCeeEEEEEEcCccCChhcccceeeEeecCCCCCCCCcH
Q 000997 841 RLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKT-GGIIEGDIYISGYPKRQETFARISGYCEQNDIHSPGLTV 919 (1194)
Q Consensus 841 ~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~-~~~~~G~i~i~g~~~~~~~~~~~~gyv~Q~~~~~~~lTv 919 (1194)
.+.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+.+|+|.++|.+.....+++.++|++|++.+++.+|+
T Consensus 19 ~~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLlk~l~G~~~~~~~~~G~i~~~g~~~~~~~~~~~i~~~~q~~~~~~~~tv 98 (226)
T cd03234 19 YARILNDVSLHVESGQVMAILGSSGSGKTTLLDAISGRVEGGGTTSGQILFNGQPRKPDQFQKCVAYVRQDDILLPGLTV 98 (226)
T ss_pred ccccccCceEEEcCCeEEEEECCCCCCHHHHHHHHhCccCCCCCCceEEEECCEECChHHhcccEEEeCCCCccCcCCcH
Confidence 3679999999999999999999999999999999999764 123689999999877554567789999999999999999
Q ss_pred HHHHHHHhhhcCCCcCcHHHHHHHHHH-HHHHcCCCcccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCC
Q 000997 920 LESLLFSAWLRLPSEIELETQRAFVEE-VMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSG 998 (1194)
Q Consensus 920 ~e~l~f~~~lr~~~~~~~~~~~~~v~~-~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEPTsg 998 (1194)
+||+.|.+....+...........+++ .++.+++.+..+.. +..||||||||++|||+|+.+|++|+|||||+|
T Consensus 99 ~enl~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~G~~qrl~laral~~~p~illlDEP~~g 173 (226)
T cd03234 99 RETLTYTAILRLPRKSSDAIRKKRVEDVLLRDLALTRIGGNL-----VKGISGGERRRVSIAVQLLWDPKVLILDEPTSG 173 (226)
T ss_pred HHHHHHHHHhhcccccchHHHHHHHHHHHHHhhcchhhhccc-----ccCcCHHHHHHHHHHHHHHhCCCEEEEeCCCcC
Confidence 999998765433222122222234455 78888887766554 358999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCeEEEEccCcEEEEeC
Q 000997 999 LDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAG 1052 (1194)
Q Consensus 999 LD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g 1052 (1194)
||+.++..+.+.|+++.++|.|||+++|++..++.+.+|++++|.+ |++++.|
T Consensus 174 LD~~~~~~~~~~l~~~~~~~~tiii~sh~~~~~~~~~~d~i~~l~~-G~i~~~g 226 (226)
T cd03234 174 LDSFTALNLVSTLSQLARRNRIVILTIHQPRSDLFRLFDRILLLSS-GEIVYSG 226 (226)
T ss_pred CCHHHHHHHHHHHHHHHHCCCEEEEEecCCCHHHHHhCCEEEEEeC-CEEEecC
Confidence 9999999999999998777999999999985468889999999984 7888765
No 136
>cd03261 ABC_Org_Solvent_Resistant ABC (ATP-binding cassette) transport system involved in resistant to organic solvents; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1e-36 Score=335.85 Aligned_cols=206 Identities=25% Similarity=0.355 Sum_probs=172.6
Q ss_pred eeeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCceeeEEEECCccCCCCC------CCceEEEEecCCCCC
Q 000997 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV------PPRTSAYVSQQDWQV 221 (1194)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~~------~~~~~~yv~Q~d~~~ 221 (1194)
.++|+|+|+++++|++++|+|||||||||||++|+|.++|. +|+|.++|.++.... .++.++|++|++.++
T Consensus 13 ~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~---~G~i~~~g~~~~~~~~~~~~~~~~~i~~v~q~~~~~ 89 (235)
T cd03261 13 RTVLKGVDLDVRRGEILAIIGPSGSGKSTLLRLIVGLLRPD---SGEVLIDGEDISGLSEAELYRLRRRMGMLFQSGALF 89 (235)
T ss_pred EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEEccccChhhHHHHhcceEEEccCcccC
Confidence 36999999999999999999999999999999999999876 999999998875432 245799999999889
Q ss_pred CCCCHHHHHHHhhhccCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhccCcchhHHHHHHHHHhCCcccccccccC
Q 000997 222 AEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGD 301 (1194)
Q Consensus 222 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~k~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 301 (1194)
+.+||+||+.++......... .+....++.+++.+||.+..++.++
T Consensus 90 ~~~tv~~~l~~~~~~~~~~~~---------------------------------~~~~~~~~~~l~~~~l~~~~~~~~~- 135 (235)
T cd03261 90 DSLTVFENVAFPLREHTRLSE---------------------------------EEIREIVLEKLEAVGLRGAEDLYPA- 135 (235)
T ss_pred CCCcHHHHHHHHHhhccCCCH---------------------------------HHHHHHHHHHHHHcCCchhhcCChh-
Confidence 999999999886432100000 0012246778999999877766554
Q ss_pred ccCCCCChhhhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEE
Q 000997 302 EMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILL 381 (1194)
Q Consensus 302 ~~~~~LSGGqkqRvsia~al~~~~~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL 381 (1194)
.|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++++.. +++|+.++|+.+++.+++|+|++|
T Consensus 136 ----~LSgG~~qrv~ia~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~-~~tvi~vsH~~~~~~~~~d~v~~l 210 (235)
T cd03261 136 ----ELSGGMKKRVALARALALDPELLLYDEPTAGLDPIASGVIDDLIRSLKKEL-GLTSIMVTHDLDTAFAIADRIAVL 210 (235)
T ss_pred ----hCCHHHHHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHhc-CcEEEEEecCHHHHHHhcCEEEEE
Confidence 699999999999999999999999999999999999999999999987533 455666888999999999999999
Q ss_pred cCCeEEEecChhhH
Q 000997 382 SEGQIVYQGPRVSV 395 (1194)
Q Consensus 382 ~~G~iv~~G~~~~~ 395 (1194)
++|++++.|+.+++
T Consensus 211 ~~G~i~~~g~~~~~ 224 (235)
T cd03261 211 YDGKIVAEGTPEEL 224 (235)
T ss_pred ECCeEEEecCHHHH
Confidence 99999999988765
No 137
>PRK11607 potG putrescine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=7.8e-37 Score=355.38 Aligned_cols=206 Identities=21% Similarity=0.301 Sum_probs=178.0
Q ss_pred eeeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCceeeEEEECCccCCCCCC-CceEEEEecCCCCCCCCCH
Q 000997 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVP-PRTSAYVSQQDWQVAEMTV 226 (1194)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lTV 226 (1194)
..+|+|+|+.+++|++++|+|||||||||||++|+|+.+++ +|+|.++|.++....+ ++.++||+|++.+||++||
T Consensus 32 ~~~l~~vsl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~---~G~I~i~g~~i~~~~~~~r~ig~vfQ~~~lfp~ltv 108 (377)
T PRK11607 32 QHAVDDVSLTIYKGEIFALLGASGCGKSTLLRMLAGFEQPT---AGQIMLDGVDLSHVPPYQRPINMMFQSYALFPHMTV 108 (377)
T ss_pred EEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCC---ceEEEECCEECCCCCHHHCCEEEEeCCCccCCCCCH
Confidence 35899999999999999999999999999999999999876 9999999998765433 5789999999999999999
Q ss_pred HHHHHHhhhccCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhccCcchhHHHHHHHHHhCCcccccccccCccCCC
Q 000997 227 RETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEMLKG 306 (1194)
Q Consensus 227 ~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~k~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~ 306 (1194)
.||+.|+.+.++... .+...+++++++.+||.+..+..+ ..
T Consensus 109 ~eNi~~~l~~~~~~~----------------------------------~~~~~~v~~~l~~l~L~~~~~~~~-----~~ 149 (377)
T PRK11607 109 EQNIAFGLKQDKLPK----------------------------------AEIASRVNEMLGLVHMQEFAKRKP-----HQ 149 (377)
T ss_pred HHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCCchhhcCCh-----hh
Confidence 999999765332100 011234788999999988776654 46
Q ss_pred CChhhhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEcCCeE
Q 000997 307 ISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEGQI 386 (1194)
Q Consensus 307 LSGGqkqRvsia~al~~~~~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~~G~i 386 (1194)
|||||||||+|||||+.+|++|||||||++||..++..+.+.|+++.+..+ .+++.++|+..++..++|+|++|++|++
T Consensus 150 LSgGq~QRVaLARAL~~~P~lLLLDEP~s~LD~~~r~~l~~~l~~l~~~~g-~tii~vTHd~~ea~~laDri~vl~~G~i 228 (377)
T PRK11607 150 LSGGQRQRVALARSLAKRPKLLLLDEPMGALDKKLRDRMQLEVVDILERVG-VTCVMVTHDQEEAMTMAGRIAIMNRGKF 228 (377)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcC-CEEEEEcCCHHHHHHhCCEEEEEeCCEE
Confidence 999999999999999999999999999999999999999999998876554 5566688999999999999999999999
Q ss_pred EEecChhhHH
Q 000997 387 VYQGPRVSVL 396 (1194)
Q Consensus 387 v~~G~~~~~~ 396 (1194)
+..|+++++.
T Consensus 229 ~~~g~~~~~~ 238 (377)
T PRK11607 229 VQIGEPEEIY 238 (377)
T ss_pred EEEcCHHHHH
Confidence 9999998874
No 138
>TIGR01188 drrA daunorubicin resistance ABC transporter ATP-binding subunit. This model describes daunorubicin resistance ABC transporter, ATP binding subunit in bacteria and archaea. This model is restricted in its scope to preferentially recognize the ATP binding subunit associated with effux of the drug, daunorubicin. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. In eukaryotes proteins of similar function include p-gyco proteins, multidrug resistance protein etc.
Probab=100.00 E-value=5.8e-37 Score=349.53 Aligned_cols=206 Identities=27% Similarity=0.387 Sum_probs=176.8
Q ss_pred eeeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCceeeEEEECCccCCCCC--CCceEEEEecCCCCCCCCC
Q 000997 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV--PPRTSAYVSQQDWQVAEMT 225 (1194)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~~--~~~~~~yv~Q~d~~~~~lT 225 (1194)
+++|+|+|+.|++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.++|++|++.+++.+|
T Consensus 6 ~~~l~~vs~~i~~Ge~~~l~G~NGaGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~i~~~~q~~~~~~~~t 82 (302)
T TIGR01188 6 FKAVDGVNFKVREGEVFGFLGPNGAGKTTTIRMLTTLLRPT---SGTARVAGYDVVREPRKVRRSIGIVPQYASVDEDLT 82 (302)
T ss_pred eeEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEEcccCHHHHHhhcEEecCCCCCCCCCc
Confidence 46999999999999999999999999999999999999876 999999998765321 2457999999999999999
Q ss_pred HHHHHHHhhhccCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhccCcchhHHHHHHHHHhCCcccccccccCccCC
Q 000997 226 VRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEMLK 305 (1194)
Q Consensus 226 V~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~k~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~ 305 (1194)
|+||+.|.++..+... .+....++++++.+||.+..++.++
T Consensus 83 v~e~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~~----- 123 (302)
T TIGR01188 83 GRENLEMMGRLYGLPK----------------------------------DEAEERAEELLELFELGEAADRPVG----- 123 (302)
T ss_pred HHHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCChhHhCCchh-----
Confidence 9999998655432110 0012247789999999988887664
Q ss_pred CCChhhhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEcCCe
Q 000997 306 GISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEGQ 385 (1194)
Q Consensus 306 ~LSGGqkqRvsia~al~~~~~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~~G~ 385 (1194)
.|||||||||+||+||+.+|++|+|||||+|||+.++..+++.|+++++. +++|+.++|..+++.++||+|++|++|+
T Consensus 124 ~LSgG~~qrv~la~al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~--g~tvi~~sH~~~~~~~~~d~v~~l~~G~ 201 (302)
T TIGR01188 124 TYSGGMRRRLDIAASLIHQPDVLFLDEPTTGLDPRTRRAIWDYIRALKEE--GVTILLTTHYMEEADKLCDRIAIIDHGR 201 (302)
T ss_pred hCCHHHHHHHHHHHHHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHhC--CCEEEEECCCHHHHHHhCCEEEEEECCE
Confidence 59999999999999999999999999999999999999999999998753 4566668899999999999999999999
Q ss_pred EEEecChhhHHH
Q 000997 386 IVYQGPRVSVLD 397 (1194)
Q Consensus 386 iv~~G~~~~~~~ 397 (1194)
+++.|+.+++..
T Consensus 202 i~~~g~~~~l~~ 213 (302)
T TIGR01188 202 IIAEGTPEELKR 213 (302)
T ss_pred EEEECCHHHHHH
Confidence 999999888754
No 139
>PRK09493 glnQ glutamine ABC transporter ATP-binding protein; Reviewed
Probab=100.00 E-value=1.1e-36 Score=336.67 Aligned_cols=203 Identities=25% Similarity=0.372 Sum_probs=172.6
Q ss_pred ceEEeeeeeEEEeCCcEEEEEccCCCChHHHHhhhcCCCCCCeeEEEEEEcCccCCh-----hcccceeeEeecCCCCCC
Q 000997 841 RLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ-----ETFARISGYCEQNDIHSP 915 (1194)
Q Consensus 841 ~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~-----~~~~~~~gyv~Q~~~~~~ 915 (1194)
++.+|+|+||++++||++||+|+||||||||+++|+|..+ +.+|+|.++|.++.. ..+++.++|++|++.+++
T Consensus 13 ~~~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~~~ 90 (240)
T PRK09493 13 PTQVLHNIDLNIDQGEVVVIIGPSGSGKSTLLRCINKLEE--ITSGDLIVDGLKVNDPKVDERLIRQEAGMVFQQFYLFP 90 (240)
T ss_pred CeEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEECCcCChhHHHHhhceEEEecccccCC
Confidence 4579999999999999999999999999999999999876 568999999987642 234567999999998889
Q ss_pred CCcHHHHHHHHhhhcCCCcCcHHHHHHHHHHHHHHcCCCcccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCC
Q 000997 916 GLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEP 995 (1194)
Q Consensus 916 ~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEP 995 (1194)
.+||+||+.+...... .....+..+.+.++++.+++.+..+..+ ..||+|||||++||++|+.+|++|+||||
T Consensus 91 ~~tv~~~l~~~~~~~~--~~~~~~~~~~~~~~l~~~gl~~~~~~~~-----~~LS~G~~qrv~la~al~~~p~llllDEP 163 (240)
T PRK09493 91 HLTALENVMFGPLRVR--GASKEEAEKQARELLAKVGLAERAHHYP-----SELSGGQQQRVAIARALAVKPKLMLFDEP 163 (240)
T ss_pred CCcHHHHHHhHHHHhc--CCCHHHHHHHHHHHHHHcCChHHHhcCh-----hhcCHHHHHHHHHHHHHhcCCCEEEEcCC
Confidence 9999999987642111 1223344456789999999977666543 57999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCeEEEEccCcEEEEeCCC
Q 000997 996 TSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1194)
Q Consensus 996 TsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~ 1054 (1194)
|+|||+.++..+.+.|++++++|+|||++||+++ ++.+.+|++++|+ +|++++.|+.
T Consensus 164 ~~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~-~G~i~~~g~~ 220 (240)
T PRK09493 164 TSALDPELRHEVLKVMQDLAEEGMTMVIVTHEIG-FAEKVASRLIFID-KGRIAEDGDP 220 (240)
T ss_pred cccCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCEEEEEE-CCEEEeeCCH
Confidence 9999999999999999999877999999999986 4667799999998 5799998875
No 140
>PRK13637 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=9.9e-37 Score=344.82 Aligned_cols=201 Identities=24% Similarity=0.345 Sum_probs=170.6
Q ss_pred eEEeeeeeEEEeCCcEEEEEccCCCChHHHHhhhcCCCCCCeeEEEEEEcCccCCh-----hcccceeeEeecCCC-CCC
Q 000997 842 LQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ-----ETFARISGYCEQNDI-HSP 915 (1194)
Q Consensus 842 ~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~-----~~~~~~~gyv~Q~~~-~~~ 915 (1194)
+.+|+||||+|++||++||+||||||||||+++|+|..+ +.+|+|.++|.++.. ..+++.+|||+|++. .+.
T Consensus 20 ~~~l~~vs~~i~~Ge~~~i~G~nGaGKSTLl~~l~Gl~~--p~~G~i~~~g~~~~~~~~~~~~~~~~ig~v~q~~~~~~~ 97 (287)
T PRK13637 20 KKALDNVNIEIEDGEFVGLIGHTGSGKSTLIQHLNGLLK--PTSGKIIIDGVDITDKKVKLSDIRKKVGLVFQYPEYQLF 97 (287)
T ss_pred cceeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCC--CCccEEEECCEECCCcCccHHHHhhceEEEecCchhccc
Confidence 469999999999999999999999999999999999876 468999999988643 234678999999863 334
Q ss_pred CCcHHHHHHHHhhhcCCCcCcHHHHHHHHHHHHHHcCCC--cccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEe
Q 000997 916 GLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELT--SLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMD 993 (1194)
Q Consensus 916 ~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~--~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illLD 993 (1194)
..||+||+.|..... ....++..+.++++++.++|. +..+.. +..||||||||++||+||+.+|++|+||
T Consensus 98 ~~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~~~-----~~~LSgGq~qrv~iAraL~~~P~llllD 169 (287)
T PRK13637 98 EETIEKDIAFGPINL---GLSEEEIENRVKRAMNIVGLDYEDYKDKS-----PFELSGGQKRRVAIAGVVAMEPKILILD 169 (287)
T ss_pred cccHHHHHHhHHHHC---CCCHHHHHHHHHHHHHHcCCCchhhccCC-----cccCCHHHHHHHHHHHHHHcCCCEEEEE
Confidence 579999999865432 234455556788999999996 455543 3589999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCeEEEEccCcEEEEeCCC
Q 000997 994 EPTSGLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1194)
Q Consensus 994 EPTsgLD~~~~~~i~~~l~~l~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~ 1054 (1194)
|||+|||+.++..+++.|++++++ |+|||++||+++ ++.+.||++++|++ |++++.|+.
T Consensus 170 EPt~gLD~~~~~~l~~~l~~l~~~~g~tvi~vtHd~~-~~~~~~drv~~l~~-G~i~~~g~~ 229 (287)
T PRK13637 170 EPTAGLDPKGRDEILNKIKELHKEYNMTIILVSHSME-DVAKLADRIIVMNK-GKCELQGTP 229 (287)
T ss_pred CCccCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEECCH
Confidence 999999999999999999999765 999999999976 46678999999985 799999875
No 141
>cd03263 ABC_subfamily_A The ABCA subfamily mediates the transport of a variety of lipid compounds. Mutations of members of ABCA subfamily are associated with human genetic diseases, such as, familial high-density lipoprotein (HDL) deficiency, neonatal surfactant deficiency, degenerative retinopathies, and congenital keratinization disorders. The ABCA1 protein is involved in disorders of cholesterol transport and high-density lipoprotein (HDL) biosynthesis. The ABCA4 (ABCR) protein transports vitamin A derivatives in the outer segments of photoreceptor cells, and therefore, performs a crucial step in the visual cycle. The ABCA genes are not present in yeast. However, evolutionary studies of ABCA genes indicate that they arose as transporters that subsequently duplicated and that certain sets of ABCA genes were lost in different eukaryotic lineages.
Probab=100.00 E-value=7.8e-37 Score=333.42 Aligned_cols=200 Identities=30% Similarity=0.449 Sum_probs=170.9
Q ss_pred eEEeeeeeEEEeCCcEEEEEccCCCChHHHHhhhcCCCCCCeeEEEEEEcCccCCh--hcccceeeEeecCCCCCCCCcH
Q 000997 842 LQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ--ETFARISGYCEQNDIHSPGLTV 919 (1194)
Q Consensus 842 ~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~--~~~~~~~gyv~Q~~~~~~~lTv 919 (1194)
+.+|+|||+++++||++||+||||||||||+++|+|..+ +.+|+|.++|.++.. ..+++.+||++|++.+++.+|+
T Consensus 15 ~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~~~~~~~~~~i~~v~q~~~~~~~~tv 92 (220)
T cd03263 15 KPAVDDLSLNVYKGEIFGLLGHNGAGKTTTLKMLTGELR--PTSGTAYINGYSIRTDRKAARQSLGYCPQFDALFDELTV 92 (220)
T ss_pred ceeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEecccchHHHhhhEEEecCcCCccccCCH
Confidence 579999999999999999999999999999999999876 468999999987642 2345679999999988889999
Q ss_pred HHHHHHHhhhcCCCcCcHHHHHHHHHHHHHHcCCCcccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCC
Q 000997 920 LESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSGL 999 (1194)
Q Consensus 920 ~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEPTsgL 999 (1194)
+||+.+....+. .......+.++++++.+++.+..+..+ ..||+|||||++||++|+.+|++|+|||||+||
T Consensus 93 ~~~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrv~la~al~~~p~llllDEP~~~L 164 (220)
T cd03263 93 REHLRFYARLKG---LPKSEIKEEVELLLRVLGLTDKANKRA-----RTLSGGMKRKLSLAIALIGGPSVLLLDEPTSGL 164 (220)
T ss_pred HHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCCHHHHhChh-----hhCCHHHHHHHHHHHHHhcCCCEEEECCCCCCC
Confidence 999988654332 222333456788999999977666543 579999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCeEEEEccCcEEEEeCCC
Q 000997 1000 DARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1194)
Q Consensus 1000 D~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~ 1054 (1194)
|+.+...+.+.|+++++ ++|||+++|+++ .+.+.+|++++|. +|++++.|+.
T Consensus 165 D~~~~~~l~~~l~~~~~-~~tii~~sH~~~-~~~~~~d~i~~l~-~g~i~~~~~~ 216 (220)
T cd03263 165 DPASRRAIWDLILEVRK-GRSIILTTHSMD-EAEALCDRIAIMS-DGKLRCIGSP 216 (220)
T ss_pred CHHHHHHHHHHHHHHhc-CCEEEEEcCCHH-HHHHhcCEEEEEE-CCEEEecCCH
Confidence 99999999999999875 699999999986 4667899999998 4789888874
No 142
>PRK11629 lolD lipoprotein transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.7e-36 Score=333.46 Aligned_cols=200 Identities=28% Similarity=0.406 Sum_probs=169.2
Q ss_pred eEEeeeeeEEEeCCcEEEEEccCCCChHHHHhhhcCCCCCCeeEEEEEEcCccCChh------cc-cceeeEeecCCCCC
Q 000997 842 LQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQE------TF-ARISGYCEQNDIHS 914 (1194)
Q Consensus 842 ~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~------~~-~~~~gyv~Q~~~~~ 914 (1194)
+.+|+|+||++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++... .+ ++.+||++|++.++
T Consensus 22 ~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~i~~~~~~~~~~~~~~~i~~v~q~~~~~ 99 (233)
T PRK11629 22 TDVLHNVSFSIGEGEMMAIVGSSGSGKSTLLHLLGGLDT--PTSGDVIFNGQPMSKLSSAAKAELRNQKLGFIYQFHHLL 99 (233)
T ss_pred eeeEEeeEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCC--CCceEEEECCEEcCcCCHHHHHHHHhccEEEEecCcccC
Confidence 579999999999999999999999999999999999876 4689999999876431 12 25699999999888
Q ss_pred CCCcHHHHHHHHhhhcCCCcCcHHHHHHHHHHHHHHcCCCcccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeC
Q 000997 915 PGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDE 994 (1194)
Q Consensus 915 ~~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illLDE 994 (1194)
+.+|++||+.+....+ .....+.++.++++++.+++.+..+... ..||||||||++||++|+.+|+||+|||
T Consensus 100 ~~~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~gl~~~~~~~~-----~~LSgG~~qrl~la~al~~~p~lllLDE 171 (233)
T PRK11629 100 PDFTALENVAMPLLIG---KKKPAEINSRALEMLAAVGLEHRANHRP-----SELSGGERQRVAIARALVNNPRLVLADE 171 (233)
T ss_pred CCCCHHHHHHHHHHhc---CCCHHHHHHHHHHHHHHcCCchhhhCCh-----hhCCHHHHHHHHHHHHHhcCCCEEEEeC
Confidence 9999999998865432 1223344456889999999987666543 5799999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCCcHHHHHhcCeEEEEccCcEEEEeCCC
Q 000997 995 PTSGLDARAAAIVMRTVRNIVN-TGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1194)
Q Consensus 995 PTsgLD~~~~~~i~~~l~~l~~-~g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~ 1054 (1194)
||+|||+.++..+.+.|+++++ .|+|||++||+++. + +.+|++++|. +|+++..|+.
T Consensus 172 Pt~~LD~~~~~~l~~~l~~~~~~~g~tvii~sH~~~~-~-~~~~~~~~l~-~G~i~~~~~~ 229 (233)
T PRK11629 172 PTGNLDARNADSIFQLLGELNRLQGTAFLVVTHDLQL-A-KRMSRQLEMR-DGRLTAELSL 229 (233)
T ss_pred CCCCCCHHHHHHHHHHHHHHHHhCCCEEEEEeCCHHH-H-HhhCEEEEEE-CCEEEEEecc
Confidence 9999999999999999999975 58999999999763 3 4568999997 5899988875
No 143
>PRK11153 metN DL-methionine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.8e-36 Score=350.19 Aligned_cols=206 Identities=24% Similarity=0.368 Sum_probs=176.0
Q ss_pred eeeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCceeeEEEECCccCCCCCC------CceEEEEecCCCCC
Q 000997 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVP------PRTSAYVSQQDWQV 221 (1194)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~~~------~~~~~yv~Q~d~~~ 221 (1194)
+++|+|+|++|++|++++|+||||||||||+++|+|.++|. +|+|.++|.++..... ++.++|++|++.++
T Consensus 18 ~~il~~vsl~i~~Gei~~iiG~nGsGKSTLlk~L~Gl~~p~---~G~I~~~g~~i~~~~~~~~~~~~~~ig~v~q~~~l~ 94 (343)
T PRK11153 18 IHALNNVSLHIPAGEIFGVIGASGAGKSTLIRCINLLERPT---SGRVLVDGQDLTALSEKELRKARRQIGMIFQHFNLL 94 (343)
T ss_pred eEEEEeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCC---ceEEEECCEECCcCCHHHHHHHhcCEEEEeCCCccC
Confidence 56999999999999999999999999999999999999876 9999999998765422 46799999999999
Q ss_pred CCCCHHHHHHHhhhccCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhccCcchhHHHHHHHHHhCCcccccccccC
Q 000997 222 AEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGD 301 (1194)
Q Consensus 222 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~k~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 301 (1194)
+.+||+||+.|.....+... .+...+++.+++.+||++..++.+
T Consensus 95 ~~~tv~eni~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~gL~~~~~~~~-- 138 (343)
T PRK11153 95 SSRTVFDNVALPLELAGTPK----------------------------------AEIKARVTELLELVGLSDKADRYP-- 138 (343)
T ss_pred CCCcHHHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCCchhhhCCh--
Confidence 99999999998654322100 001224678899999988777655
Q ss_pred ccCCCCChhhhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEE
Q 000997 302 EMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILL 381 (1194)
Q Consensus 302 ~~~~~LSGGqkqRvsia~al~~~~~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL 381 (1194)
+.|||||||||+||+||+.+|++|||||||+|||+.++..+.+.|+++++.. +++|+.++|..+++.++||+|++|
T Consensus 139 ---~~LSgGq~qRv~lAraL~~~p~iLlLDEPts~LD~~~~~~l~~~L~~l~~~~-g~tiilvtH~~~~i~~~~d~v~~l 214 (343)
T PRK11153 139 ---AQLSGGQKQRVAIARALASNPKVLLCDEATSALDPATTRSILELLKDINREL-GLTIVLITHEMDVVKRICDRVAVI 214 (343)
T ss_pred ---hhCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhc-CCEEEEEeCCHHHHHHhCCEEEEE
Confidence 4699999999999999999999999999999999999999999999987643 455666889999999999999999
Q ss_pred cCCeEEEecChhhHH
Q 000997 382 SEGQIVYQGPRVSVL 396 (1194)
Q Consensus 382 ~~G~iv~~G~~~~~~ 396 (1194)
++|++++.|+.+++.
T Consensus 215 ~~G~i~~~g~~~~~~ 229 (343)
T PRK11153 215 DAGRLVEQGTVSEVF 229 (343)
T ss_pred ECCEEEEEcCHHHHH
Confidence 999999999988774
No 144
>COG4559 ABC-type hemin transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=5.4e-37 Score=310.25 Aligned_cols=207 Identities=26% Similarity=0.397 Sum_probs=176.4
Q ss_pred cceEEeeeeeEEEeCCcEEEEEccCCCChHHHHhhhcCCCCCCeeEEEEEEcCccCCh---hcccceeeEeecCCCCCCC
Q 000997 840 DRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ---ETFARISGYCEQNDIHSPG 916 (1194)
Q Consensus 840 ~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~---~~~~~~~gyv~Q~~~~~~~ 916 (1194)
.++++|++||++++|||++||+|||||||||||+.|+|... +.+|++.+||.+.+. ...++.-+..||+..+...
T Consensus 12 ~Gr~ll~~vsl~~~pGev~ailGPNGAGKSTlLk~LsGel~--p~~G~v~~~g~~l~~~~~~~lA~~raVlpQ~s~laFp 89 (259)
T COG4559 12 AGRRLLDGVSLDLRPGEVLAILGPNGAGKSTLLKALSGELS--PDSGEVTLNGVPLNSWPPEELARHRAVLPQNSSLAFP 89 (259)
T ss_pred ecceeccCcceeccCCcEEEEECCCCccHHHHHHHhhCccC--CCCCeEeeCCcChhhCCHHHHHHHhhhcccCcccccc
Confidence 46789999999999999999999999999999999999876 458999999998754 3456777999999888777
Q ss_pred CcHHHHHHHHhhhcCCCcCcHHHHHHHHHHHHHHcCCCcccCCcccCCCCCCCCHHHHHHHHHHHHHhh------CCCEE
Q 000997 917 LTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVA------NPSIV 990 (1194)
Q Consensus 917 lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~------~p~il 990 (1194)
.||+|-+.++..-... .-...+..+.++++|...++.+++.... ..|||||||||.+||.|++ ++++|
T Consensus 90 Ftv~eVV~mGr~p~~~-g~~~~e~~~i~~~ala~~d~~~la~R~y-----~~LSGGEqQRVqlARvLaQl~~~v~~~r~L 163 (259)
T COG4559 90 FTVQEVVQMGRIPHRS-GREPEEDERIAAQALAATDLSGLAGRDY-----RTLSGGEQQRVQLARVLAQLWPPVPSGRWL 163 (259)
T ss_pred eEHHHHHHhccccccc-CCCchhhHHHHHHHHHHcChhhhhccch-----hhcCchHHHHHHHHHHHHHccCCCCCCceE
Confidence 8999999987532211 1122244566889999999999887653 5799999999999999975 44699
Q ss_pred EEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCeEEEEccCcEEEEeCCCCC
Q 000997 991 FMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLGS 1056 (1194)
Q Consensus 991 lLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~~~ 1056 (1194)
|||||||+||...+..++++.|+++++|..|+++-||.+. ...++|||++|. +|+++..|++.+
T Consensus 164 ~LDEPtsaLDi~HQ~~tl~laR~la~~g~~V~~VLHDLNL-AA~YaDrivll~-~Grv~a~g~p~~ 227 (259)
T COG4559 164 FLDEPTSALDIAHQHHTLRLARQLAREGGAVLAVLHDLNL-AAQYADRIVLLH-QGRVIASGSPQD 227 (259)
T ss_pred EecCCccccchHHHHHHHHHHHHHHhcCCcEEEEEccchH-HHHhhheeeeee-CCeEeecCCHHH
Confidence 9999999999999999999999999999999999999985 668899999998 589999998753
No 145
>PRK11264 putative amino-acid ABC transporter ATP-binding protein YecC; Provisional
Probab=100.00 E-value=1.3e-36 Score=338.43 Aligned_cols=203 Identities=28% Similarity=0.379 Sum_probs=171.6
Q ss_pred ceEEeeeeeEEEeCCcEEEEEccCCCChHHHHhhhcCCCCCCeeEEEEEEcCccCCh-----------hcccceeeEeec
Q 000997 841 RLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ-----------ETFARISGYCEQ 909 (1194)
Q Consensus 841 ~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~-----------~~~~~~~gyv~Q 909 (1194)
++.+|+||||++++|+++||+||||||||||+++|+|..+ +.+|+|.++|.++.. ...++.++|++|
T Consensus 15 ~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~~~~~~~~~~~~~~~~~~i~~v~q 92 (250)
T PRK11264 15 GQTVLHGIDLEVKPGEVVAIIGPSGSGKTTLLRCINLLEQ--PEAGTIRVGDITIDTARSLSQQKGLIRQLRQHVGFVFQ 92 (250)
T ss_pred CeeeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCeEEEECCEEccccccccchhhHHHHhhhhEEEEec
Confidence 4579999999999999999999999999999999999876 468999999987532 224567999999
Q ss_pred CCCCCCCCcHHHHHHHHhhhcCCCcCcHHHHHHHHHHHHHHcCCCcccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCE
Q 000997 910 NDIHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSI 989 (1194)
Q Consensus 910 ~~~~~~~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~i 989 (1194)
++.+++..|++||+.+...... ........+.++++++.+++.+..+.. +..|||||||||+||++|+.+|++
T Consensus 93 ~~~~~~~~tv~e~l~~~~~~~~--~~~~~~~~~~~~~~l~~~gl~~~~~~~-----~~~LS~Gq~qrv~la~al~~~p~l 165 (250)
T PRK11264 93 NFNLFPHRTVLENIIEGPVIVK--GEPKEEATARARELLAKVGLAGKETSY-----PRRLSGGQQQRVAIARALAMRPEV 165 (250)
T ss_pred CcccCCCCCHHHHHHHHHHHhc--CCCHHHHHHHHHHHHHHcCCcchhhCC-----hhhCChHHHHHHHHHHHHhcCCCE
Confidence 9988889999999987543211 122334445678899999998766553 358999999999999999999999
Q ss_pred EEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCeEEEEccCcEEEEeCCC
Q 000997 990 VFMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1194)
Q Consensus 990 llLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~ 1054 (1194)
|+|||||+|||+.++..+++.|+++.++|.|||+++|+++ .+.+.+|++++|++ |++++.|+.
T Consensus 166 llLDEPt~~LD~~~~~~l~~~l~~~~~~~~tvi~~tH~~~-~~~~~~d~i~~l~~-G~i~~~~~~ 228 (250)
T PRK11264 166 ILFDEPTSALDPELVGEVLNTIRQLAQEKRTMVIVTHEMS-FARDVADRAIFMDQ-GRIVEQGPA 228 (250)
T ss_pred EEEeCCCccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhcCEEEEEEC-CEEEEeCCH
Confidence 9999999999999999999999999877999999999976 46678999999984 789988874
No 146
>cd03295 ABC_OpuCA_Osmoprotection OpuCA is a the ATP binding component of a bacterial solute transporter that serves a protective role to cells growing in a hyperosmolar environment. ABC (ATP-binding cassette) transporter nucleotide-binding domain; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition, to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.1e-36 Score=336.89 Aligned_cols=201 Identities=28% Similarity=0.406 Sum_probs=171.5
Q ss_pred eEEeeeeeEEEeCCcEEEEEccCCCChHHHHhhhcCCCCCCeeEEEEEEcCccCCh---hcccceeeEeecCCCCCCCCc
Q 000997 842 LQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ---ETFARISGYCEQNDIHSPGLT 918 (1194)
Q Consensus 842 ~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~---~~~~~~~gyv~Q~~~~~~~lT 918 (1194)
+.+|+|+|++|++|+++||+||||||||||+++|+|..+ +.+|+|.++|.++.. ..+++.++|++|++.+++.+|
T Consensus 14 ~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~~~t 91 (242)
T cd03295 14 KKAVNNLNLEIAKGEFLVLIGPSGSGKTTTMKMINRLIE--PTSGEIFIDGEDIREQDPVELRRKIGYVIQQIGLFPHMT 91 (242)
T ss_pred ceEeeeeEEEECCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCceEEECCeEcCcCChHHhhcceEEEccCccccCCCc
Confidence 569999999999999999999999999999999999876 468999999987532 234567899999999999999
Q ss_pred HHHHHHHHhhhcCCCcCcHHHHHHHHHHHHHHcCCCc--ccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCC
Q 000997 919 VLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTS--LSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPT 996 (1194)
Q Consensus 919 v~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~--~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEPT 996 (1194)
++||+.+...++. .......+.+.++++.+++.+ ..+.. +..|||||||||+|||+|+.+|++|+|||||
T Consensus 92 v~e~l~~~~~~~~---~~~~~~~~~~~~~l~~l~l~~~~~~~~~-----~~~LS~G~~qrv~laral~~~p~llllDEPt 163 (242)
T cd03295 92 VEENIALVPKLLK---WPKEKIRERADELLALVGLDPAEFADRY-----PHELSGGQQQRVGVARALAADPPLLLMDEPF 163 (242)
T ss_pred HHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCCCcHHHHhcC-----hhhCCHHHHHHHHHHHHHhcCCCEEEecCCc
Confidence 9999988654331 223344456788999999975 55543 3589999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCeEEEEccCcEEEEeCCC
Q 000997 997 SGLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1194)
Q Consensus 997 sgLD~~~~~~i~~~l~~l~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~ 1054 (1194)
+|||+.++..+.+.|++++++ |+|||++||+++ ++.+.+|++++|. +|++++.|+.
T Consensus 164 ~~LD~~~~~~l~~~L~~~~~~~g~tvii~sH~~~-~~~~~~d~i~~l~-~G~i~~~~~~ 220 (242)
T cd03295 164 GALDPITRDQLQEEFKRLQQELGKTIVFVTHDID-EAFRLADRIAIMK-NGEIVQVGTP 220 (242)
T ss_pred ccCCHHHHHHHHHHHHHHHHHcCCEEEEEecCHH-HHHHhCCEEEEEE-CCEEEEecCH
Confidence 999999999999999999764 899999999986 4677899999998 4789888874
No 147
>PRK11248 tauB taurine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.5e-36 Score=337.62 Aligned_cols=201 Identities=26% Similarity=0.350 Sum_probs=170.9
Q ss_pred ceEEeeeeeEEEeCCcEEEEEccCCCChHHHHhhhcCCCCCCeeEEEEEEcCccCChhcccceeeEeecCCCCCCCCcHH
Q 000997 841 RLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQETFARISGYCEQNDIHSPGLTVL 920 (1194)
Q Consensus 841 ~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~~~~~~~gyv~Q~~~~~~~lTv~ 920 (1194)
++.+|+|+||++++|+++||+||||||||||+++|+|..+ +.+|+|.++|.++.. ..+.+||++|++.+++.+||+
T Consensus 13 ~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~~~~--~~~~~~~v~q~~~~~~~~tv~ 88 (255)
T PRK11248 13 GKPALEDINLTLESGELLVVLGPSGCGKTTLLNLIAGFVP--YQHGSITLDGKPVEG--PGAERGVVFQNEGLLPWRNVQ 88 (255)
T ss_pred CeeeEeeeeEEECCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEECCC--CCCcEEEEeCCCccCCCCcHH
Confidence 4579999999999999999999999999999999999876 468999999987643 234579999999888889999
Q ss_pred HHHHHHhhhcCCCcCcHHHHHHHHHHHHHHcCCCcccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCC
Q 000997 921 ESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSGLD 1000 (1194)
Q Consensus 921 e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEPTsgLD 1000 (1194)
||+.+....+. ....+..+.++++++.+++.+..+.. +..|||||||||+||++|+.+|++|+|||||+|||
T Consensus 89 e~l~~~~~~~~---~~~~~~~~~~~~~l~~~gl~~~~~~~-----~~~LSgGq~qrl~laral~~~p~lllLDEPt~~LD 160 (255)
T PRK11248 89 DNVAFGLQLAG---VEKMQRLEIAHQMLKKVGLEGAEKRY-----IWQLSGGQRQRVGIARALAANPQLLLLDEPFGALD 160 (255)
T ss_pred HHHHhHHHHcC---CCHHHHHHHHHHHHHHcCChhHhhCC-----hhhCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCC
Confidence 99987644321 22333445688999999998766654 35799999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHh-CCCEEEEEecCCcHHHHHhcCeEEEEcc-CcEEEEeCCC
Q 000997 1001 ARAAAIVMRTVRNIVN-TGRTIVCTIHQPSIDIFESFDELLFMKR-GGELIYAGPL 1054 (1194)
Q Consensus 1001 ~~~~~~i~~~l~~l~~-~g~tvi~~~H~~~~~~~~~~d~~~~l~~-gG~~~~~g~~ 1054 (1194)
+.++..+.+.|+++++ .|+|||++||+++ .+...||++++|++ +|+++..++.
T Consensus 161 ~~~~~~l~~~L~~~~~~~g~tviivsH~~~-~~~~~~d~i~~l~~~~G~i~~~~~~ 215 (255)
T PRK11248 161 AFTREQMQTLLLKLWQETGKQVLLITHDIE-EAVFMATELVLLSPGPGRVVERLPL 215 (255)
T ss_pred HHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEeCCCcEEEEEecC
Confidence 9999999999999854 5899999999986 56788999999984 5899887764
No 148
>cd03224 ABC_TM1139_LivF_branched LivF (TM1139) is part of the LIV-I bacterial ABC-type two-component transport system that imports neutral, branched-chain amino acids. The E. coli branched-chain amino acid transporter comprises a heterodimer of ABC transporters (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules.
Probab=100.00 E-value=9.5e-37 Score=333.30 Aligned_cols=201 Identities=28% Similarity=0.406 Sum_probs=167.7
Q ss_pred cceEEeeeeeEEEeCCcEEEEEccCCCChHHHHhhhcCCCCCCeeEEEEEEcCccCChh---c-ccceeeEeecCCCCCC
Q 000997 840 DRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQE---T-FARISGYCEQNDIHSP 915 (1194)
Q Consensus 840 ~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~---~-~~~~~gyv~Q~~~~~~ 915 (1194)
+++.+|+|+||++++||++||+||||||||||+++|+|..+ +.+|+|.++|.++... . .++.++|++|++.+++
T Consensus 11 ~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~ 88 (222)
T cd03224 11 GKSQILFGVSLTVPEGEIVALLGRNGAGKTTLLKTIMGLLP--PRSGSIRFDGRDITGLPPHERARAGIGYVPEGRRIFP 88 (222)
T ss_pred CCeeEeeeeeEEEcCCeEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEEcCCCCHHHHHhcCeEEeccccccCC
Confidence 34579999999999999999999999999999999999876 4689999999875421 1 2456999999999999
Q ss_pred CCcHHHHHHHHhhhcCCCcCcHHHHHHHHHHHHHHc-CCCcccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeC
Q 000997 916 GLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELV-ELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDE 994 (1194)
Q Consensus 916 ~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l-~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illLDE 994 (1194)
.+|++||+.+...... .......+.++++.+ ++.+..+.. +..||||||||++|||+|+.+|++|+|||
T Consensus 89 ~~t~~~~l~~~~~~~~-----~~~~~~~~~~~l~~~~~l~~~~~~~-----~~~LS~G~~qrv~laral~~~p~llllDE 158 (222)
T cd03224 89 ELTVEENLLLGAYARR-----RAKRKARLERVYELFPRLKERRKQL-----AGTLSGGEQQMLAIARALMSRPKLLLLDE 158 (222)
T ss_pred CCcHHHHHHHHhhhcC-----chhHHHHHHHHHHHHHhhhhhhhCc-----hhhCCHHHHHHHHHHHHHhcCCCEEEECC
Confidence 9999999988654321 112234456777777 465554543 35799999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCeEEEEccCcEEEEeCCC
Q 000997 995 PTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1194)
Q Consensus 995 PTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~ 1054 (1194)
||+|||+.++..+++.|++++++|+|||+++|+++ ++...+|++++|+ .|+++..|+.
T Consensus 159 Pt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~-~G~i~~~~~~ 216 (222)
T cd03224 159 PSEGLAPKIVEEIFEAIRELRDEGVTILLVEQNAR-FALEIADRAYVLE-RGRVVLEGTA 216 (222)
T ss_pred CcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhccEEEEee-CCeEEEeCCH
Confidence 99999999999999999999877999999999976 4678899999998 4789988874
No 149
>COG0410 LivF ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=1e-36 Score=315.89 Aligned_cols=206 Identities=26% Similarity=0.382 Sum_probs=173.7
Q ss_pred eeeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCceeeEEEECCccCCCCCC----CceEEEEecCCCCCCC
Q 000997 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVP----PRTSAYVSQQDWQVAE 223 (1194)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~~~----~~~~~yv~Q~d~~~~~ 223 (1194)
.+||+|||+.+++||+++|+||||+||||||++|+|..++. +|+|.++|.+++...+ ++-++||||....|+.
T Consensus 16 ~~~L~gvsl~v~~Geiv~llG~NGaGKTTlLkti~Gl~~~~---~G~I~~~G~dit~~p~~~r~r~Gi~~VPegR~iF~~ 92 (237)
T COG0410 16 IQALRGVSLEVERGEIVALLGRNGAGKTTLLKTIMGLVRPR---SGRIIFDGEDITGLPPHERARLGIAYVPEGRRIFPR 92 (237)
T ss_pred eeEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CeeEEECCeecCCCCHHHHHhCCeEeCcccccchhh
Confidence 57999999999999999999999999999999999999875 9999999999988765 3568999999999999
Q ss_pred CCHHHHHHHhhhccCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhccCcchhHHHHHHHHHhC-CcccccccccCc
Q 000997 224 MTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILG-LDTCADTLVGDE 302 (1194)
Q Consensus 224 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~k~~~~~~~~~~~~~~~~l~~lg-L~~~~dt~vg~~ 302 (1194)
|||+|||..++......... ...+|.+.+.|= |....+..-|
T Consensus 93 LTVeENL~~g~~~~~~~~~~-----------------------------------~~~~e~v~~lFP~Lker~~~~aG-- 135 (237)
T COG0410 93 LTVEENLLLGAYARRDKEAQ-----------------------------------ERDLEEVYELFPRLKERRNQRAG-- 135 (237)
T ss_pred CcHHHHHhhhhhcccccccc-----------------------------------cccHHHHHHHChhHHHHhcCccc--
Confidence 99999999865432110000 000333444432 4444556555
Q ss_pred cCCCCChhhhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEc
Q 000997 303 MLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLS 382 (1194)
Q Consensus 303 ~~~~LSGGqkqRvsia~al~~~~~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~ 382 (1194)
.|||||+|-++|||||+++|++|+|||||.||-|.-..+|++.++++.+.. +.+|+.+.|+...+.+++|+.++|.
T Consensus 136 ---~LSGGEQQMLAiaRALm~~PklLLLDEPs~GLaP~iv~~I~~~i~~l~~~~-g~tIlLVEQn~~~Al~iaDr~yvle 211 (237)
T COG0410 136 ---TLSGGEQQMLAIARALMSRPKLLLLDEPSEGLAPKIVEEIFEAIKELRKEG-GMTILLVEQNARFALEIADRGYVLE 211 (237)
T ss_pred ---CCChHHHHHHHHHHHHhcCCCEEEecCCccCcCHHHHHHHHHHHHHHHHcC-CcEEEEEeccHHHHHHhhCEEEEEe
Confidence 499999999999999999999999999999999999999999999998653 4678889999999999999999999
Q ss_pred CCeEEEecChhhHHH
Q 000997 383 EGQIVYQGPRVSVLD 397 (1194)
Q Consensus 383 ~G~iv~~G~~~~~~~ 397 (1194)
+|+|++.|+.+++..
T Consensus 212 ~Griv~~G~~~eL~~ 226 (237)
T COG0410 212 NGRIVLSGTAAELLA 226 (237)
T ss_pred CCEEEEecCHHHHhc
Confidence 999999999998853
No 150
>COG4152 ABC-type uncharacterized transport system, ATPase component [General function prediction only]
Probab=100.00 E-value=4e-37 Score=317.22 Aligned_cols=210 Identities=24% Similarity=0.371 Sum_probs=189.4
Q ss_pred ccccccccceEEeeeeeEEEeCCcEEEEEccCCCChHHHHhhhcCCCCCCeeEEEEEEcCccCChhcccceeeEeecCCC
Q 000997 833 KQEGVLEDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQETFARISGYCEQNDI 912 (1194)
Q Consensus 833 ~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~~~~~~~gyv~Q~~~ 912 (1194)
.+.++.++++.+++||||.++||+++|++|+|||||||++++|.|... +.+|.|.++|.+++.. ...+|||.|.+..
T Consensus 6 e~vtK~Fg~k~av~~isf~v~~G~i~GllG~NGAGKTTtfRmILglle--~~~G~I~~~g~~~~~~-~~~rIGyLPEERG 82 (300)
T COG4152 6 EGVTKSFGDKKAVDNISFEVPPGEIFGLLGPNGAGKTTTFRMILGLLE--PTEGEITWNGGPLSQE-IKNRIGYLPEERG 82 (300)
T ss_pred ecchhccCceeeecceeeeecCCeEEEeecCCCCCccchHHHHhccCC--ccCceEEEcCcchhhh-hhhhcccChhhhc
Confidence 344456688999999999999999999999999999999999999887 5689999999988654 3557899999999
Q ss_pred CCCCCcHHHHHHHHhhhcCCCcCcHHHHHHHHHHHHHHcCCCcccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEE
Q 000997 913 HSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFM 992 (1194)
Q Consensus 913 ~~~~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illL 992 (1194)
+++.+||.|.|.|-|.|+ .++.++....+...|+.+++.+.....+ ..||.|++|++.+-.+++++|++++|
T Consensus 83 Ly~k~tv~dql~yla~Lk---Gm~~~e~~~~~~~wLer~~i~~~~~~kI-----k~LSKGnqQKIQfisaviHePeLlIL 154 (300)
T COG4152 83 LYPKMTVEDQLKYLAELK---GMPKAEIQKKLQAWLERLEIVGKKTKKI-----KELSKGNQQKIQFISAVIHEPELLIL 154 (300)
T ss_pred cCccCcHHHHHHHHHHhc---CCcHHHHHHHHHHHHHhccccccccchH-----HHhhhhhhHHHHHHHHHhcCCCEEEe
Confidence 999999999999999887 4556777788899999999998877665 58999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCeEEEEccCcEEEEeCCCC
Q 000997 993 DEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLG 1055 (1194)
Q Consensus 993 DEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~~ 1055 (1194)
|||+|||||.+...+-+.+.+++++|.|||+++|+++ .+-++||++++|++ |+.|..|+..
T Consensus 155 DEPFSGLDPVN~elLk~~I~~lk~~GatIifSsH~Me-~vEeLCD~llmL~k-G~~V~~G~v~ 215 (300)
T COG4152 155 DEPFSGLDPVNVELLKDAIFELKEEGATIIFSSHRME-HVEELCDRLLMLKK-GQTVLYGTVE 215 (300)
T ss_pred cCCccCCChhhHHHHHHHHHHHHhcCCEEEEecchHH-HHHHHhhhhheecC-CceEEeccHH
Confidence 9999999999999999999999999999999999987 68899999999985 7888889863
No 151
>TIGR02673 FtsE cell division ATP-binding protein FtsE. This model describes FtsE, a member of the ABC transporter ATP-binding protein family. This protein, and its permease partner FtsX, localize to the division site. In a number of species, the ftsEX gene pair is located next to FtsY, the signal recognition particle-docking protein.
Probab=100.00 E-value=9.8e-37 Score=331.19 Aligned_cols=193 Identities=26% Similarity=0.346 Sum_probs=165.0
Q ss_pred eEEeeeeeEEEeCCcEEEEEccCCCChHHHHhhhcCCCCCCeeEEEEEEcCccCCh------hcccceeeEeecCCCCCC
Q 000997 842 LQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ------ETFARISGYCEQNDIHSP 915 (1194)
Q Consensus 842 ~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~------~~~~~~~gyv~Q~~~~~~ 915 (1194)
+.+|+|+||++++||++||+||||||||||+++|+|..+ +.+|+|.++|.++.. ..+++.++|++|++.+++
T Consensus 15 ~~il~~is~~i~~G~~~~l~G~nGsGKSTLl~~i~Gl~~--~~~G~i~~~g~~~~~~~~~~~~~~~~~i~~~~q~~~~~~ 92 (214)
T TIGR02673 15 VAALHDVSLHIRKGEFLFLTGPSGAGKTTLLKLLYGALT--PSRGQVRIAGEDVNRLRGRQLPLLRRRIGVVFQDFRLLP 92 (214)
T ss_pred ceeecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEEcccCCHHHHHHHHhheEEEecChhhcc
Confidence 569999999999999999999999999999999999876 468999999987642 124567999999998888
Q ss_pred CCcHHHHHHHHhhhcCCCcCcHHHHHHHHHHHHHHcCCCcccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCC
Q 000997 916 GLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEP 995 (1194)
Q Consensus 916 ~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEP 995 (1194)
.+|++||+.+....+. .......+.++++++.+++.+..+..+ ..||||||||++||++|+.+|++|+||||
T Consensus 93 ~~tv~~~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrl~la~al~~~p~lllLDEP 164 (214)
T TIGR02673 93 DRTVYENVALPLEVRG---KKEREIQRRVGAALRQVGLEHKADAFP-----EQLSGGEQQRVAIARAIVNSPPLLLADEP 164 (214)
T ss_pred CCcHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCChhhhhCCh-----hhCCHHHHHHHHHHHHHhCCCCEEEEeCC
Confidence 9999999988754321 222334456788999999977655543 57999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCeEEEEccC
Q 000997 996 TSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRG 1045 (1194)
Q Consensus 996 TsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~g 1045 (1194)
|+|||+.++..+.+.|+++.++|+|||++||+++ ++...||++++|++|
T Consensus 165 t~~LD~~~~~~l~~~l~~~~~~~~tii~~tH~~~-~~~~~~d~i~~l~~G 213 (214)
T TIGR02673 165 TGNLDPDLSERILDLLKRLNKRGTTVIVATHDLS-LVDRVAHRVIILDDG 213 (214)
T ss_pred cccCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhcCEEEEecCC
Confidence 9999999999999999998777999999999986 566779999999853
No 152
>PRK11000 maltose/maltodextrin transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.4e-36 Score=353.87 Aligned_cols=206 Identities=25% Similarity=0.381 Sum_probs=176.6
Q ss_pred eeeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCceeeEEEECCccCCCCCC-CceEEEEecCCCCCCCCCH
Q 000997 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVP-PRTSAYVSQQDWQVAEMTV 226 (1194)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lTV 226 (1194)
+++|+|+|++|++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++....+ ++.++||+|++.+++.+||
T Consensus 16 ~~vl~~vsl~i~~Ge~~~l~G~nGsGKSTLL~~iaGl~~p~---~G~I~~~g~~i~~~~~~~~~i~~v~Q~~~l~~~~tv 92 (369)
T PRK11000 16 VVISKDINLDIHEGEFVVFVGPSGCGKSTLLRMIAGLEDIT---SGDLFIGEKRMNDVPPAERGVGMVFQSYALYPHLSV 92 (369)
T ss_pred eEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCC---ceEEEECCEECCCCCHhHCCEEEEeCCcccCCCCCH
Confidence 36999999999999999999999999999999999999876 9999999998765432 4679999999999999999
Q ss_pred HHHHHHhhhccCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhccCcchhHHHHHHHHHhCCcccccccccCccCCC
Q 000997 227 RETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEMLKG 306 (1194)
Q Consensus 227 ~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~k~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~ 306 (1194)
+||+.|+.+..+... .+...+++++++.+||++..++.++ .
T Consensus 93 ~eni~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~lgL~~~~~~~~~-----~ 133 (369)
T PRK11000 93 AENMSFGLKLAGAKK----------------------------------EEINQRVNQVAEVLQLAHLLDRKPK-----A 133 (369)
T ss_pred HHHHHhHHhhcCCCH----------------------------------HHHHHHHHHHHHHcCChhhhcCChh-----h
Confidence 999998754322100 0012347788999999887776654 6
Q ss_pred CChhhhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEcCCeE
Q 000997 307 ISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEGQI 386 (1194)
Q Consensus 307 LSGGqkqRvsia~al~~~~~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~~G~i 386 (1194)
|||||||||+|||||+.+|++|+|||||+|||+.++..+.+.|+++.+.. +++++.++|+..++..++|+|++|++|++
T Consensus 134 LSgGq~QRvaLAraL~~~P~lLLLDEPts~LD~~~~~~l~~~L~~l~~~~-g~tvI~vTHd~~~~~~~~d~i~vl~~G~i 212 (369)
T PRK11000 134 LSGGQRQRVAIGRTLVAEPSVFLLDEPLSNLDAALRVQMRIEISRLHKRL-GRTMIYVTHDQVEAMTLADKIVVLDAGRV 212 (369)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHHh-CCEEEEEeCCHHHHHHhCCEEEEEECCEE
Confidence 99999999999999999999999999999999999999999999987643 45566688999999999999999999999
Q ss_pred EEecChhhHH
Q 000997 387 VYQGPRVSVL 396 (1194)
Q Consensus 387 v~~G~~~~~~ 396 (1194)
+..|+++++.
T Consensus 213 ~~~g~~~~i~ 222 (369)
T PRK11000 213 AQVGKPLELY 222 (369)
T ss_pred EEEcCHHHHH
Confidence 9999988874
No 153
>COG0411 LivG ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=4e-37 Score=321.34 Aligned_cols=221 Identities=22% Similarity=0.344 Sum_probs=187.4
Q ss_pred cceeeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCceeeEEEECCccCCCCCCC----ceEEEEecCCCCC
Q 000997 146 SKLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVPP----RTSAYVSQQDWQV 221 (1194)
Q Consensus 146 ~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~~~~----~~~~yv~Q~d~~~ 221 (1194)
....+++|||+++++||+++|+||||||||||+|+|+|.+.|+ +|+|.++|.+++...++ .-++..+|...+|
T Consensus 15 GGl~Al~~Vsl~v~~Gei~~LIGPNGAGKTTlfNlitG~~~P~---~G~v~~~G~~it~l~p~~iar~Gi~RTFQ~~rlF 91 (250)
T COG0411 15 GGLTAVNDVSLEVRPGEIVGLIGPNGAGKTTLFNLITGFYKPS---SGTVIFRGRDITGLPPHRIARLGIARTFQITRLF 91 (250)
T ss_pred CCEEEEeceeEEEcCCeEEEEECCCCCCceeeeeeecccccCC---CceEEECCcccCCCCHHHHHhccceeeccccccc
Confidence 3467999999999999999999999999999999999999987 99999999999887654 4578899999999
Q ss_pred CCCCHHHHHHHhhhccCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhccCcchhHHHHHHHHHhCCcccccccccC
Q 000997 222 AEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGD 301 (1194)
Q Consensus 222 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~k~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 301 (1194)
++|||.||+..++..+.. +...... ... .....+...+...+|+.+||.+.+|+..|+
T Consensus 92 ~~lTVlENv~va~~~~~~---~~~~l~~---------~~~----------~~~e~~~~e~A~~~Le~vgL~~~a~~~A~~ 149 (250)
T COG0411 92 PGLTVLENVAVGAHARLG---LSGLLGR---------PRA----------RKEEREARERARELLEFVGLGELADRPAGN 149 (250)
T ss_pred CCCcHHHHHHHHhhhhhh---hhhhhcc---------ccc----------hhhHHHHHHHHHHHHHHcCCchhhcchhhc
Confidence 999999999988664421 0000000 000 000112244578899999999999999875
Q ss_pred ccCCCCChhhhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEE
Q 000997 302 EMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILL 381 (1194)
Q Consensus 302 ~~~~~LSGGqkqRvsia~al~~~~~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL 381 (1194)
||+|||||+.|||||+.+|++|+||||.+||.+.-+.++.+.++++.+. ++.+|+.+-|+.+-++.+||||+||
T Consensus 150 -----LsyG~qR~LEIArALa~~P~lLLLDEPaAGln~~e~~~l~~~i~~i~~~-~g~tillIEHdM~~Vm~l~dri~Vl 223 (250)
T COG0411 150 -----LSYGQQRRLEIARALATQPKLLLLDEPAAGLNPEETEELAELIRELRDR-GGVTILLIEHDMKLVMGLADRIVVL 223 (250)
T ss_pred -----CChhHhHHHHHHHHHhcCCCEEEecCccCCCCHHHHHHHHHHHHHHHhc-CCcEEEEEEeccHHHhhhccEEEec
Confidence 9999999999999999999999999999999999999999999999864 4577777999999999999999999
Q ss_pred cCCeEEEecChhhHHH
Q 000997 382 SEGQIVYQGPRVSVLD 397 (1194)
Q Consensus 382 ~~G~iv~~G~~~~~~~ 397 (1194)
+.|+++..|+++++.+
T Consensus 224 ~~G~~IAeG~P~eV~~ 239 (250)
T COG0411 224 NYGEVIAEGTPEEVRN 239 (250)
T ss_pred cCCcCcccCCHHHHhc
Confidence 9999999999999853
No 154
>cd03292 ABC_FtsE_transporter FtsE is a hydrophilic nucleotide-binding protein that binds FtsX to form a heterodimeric ATP-binding cassette (ABC)-type transporter that associates with the bacterial inner membrane. The FtsE/X transporter is thought to be involved in cell division and is important for assembly or stability of the septal ring.
Probab=100.00 E-value=1.2e-36 Score=330.46 Aligned_cols=194 Identities=27% Similarity=0.357 Sum_probs=165.8
Q ss_pred eEEeeeeeEEEeCCcEEEEEccCCCChHHHHhhhcCCCCCCeeEEEEEEcCccCCh------hcccceeeEeecCCCCCC
Q 000997 842 LQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ------ETFARISGYCEQNDIHSP 915 (1194)
Q Consensus 842 ~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~------~~~~~~~gyv~Q~~~~~~ 915 (1194)
+.+|+|+|+++++||++||+||||||||||+++|+|..+ +.+|+|.++|.++.. ..+++.++|++|++.+++
T Consensus 14 ~~~l~~~sl~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~i~~~~~~~~~~~~~~i~~v~q~~~~~~ 91 (214)
T cd03292 14 TAALDGINISISAGEFVFLVGPSGAGKSTLLKLIYKEEL--PTSGTIRVNGQDVSDLRGRAIPYLRRKIGVVFQDFRLLP 91 (214)
T ss_pred ceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCceEEEECCEEcccCCHHHHHHHHHheEEEecCchhcc
Confidence 469999999999999999999999999999999999866 468999999987532 124567999999999999
Q ss_pred CCcHHHHHHHHhhhcCCCcCcHHHHHHHHHHHHHHcCCCcccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCC
Q 000997 916 GLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEP 995 (1194)
Q Consensus 916 ~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEP 995 (1194)
.+|++||+.+....+. ....+..+.++++++.+++.+..+..+ .+||||||||++||++|+.+|++|+||||
T Consensus 92 ~~t~~~~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrv~laral~~~p~llllDEP 163 (214)
T cd03292 92 DRNVYENVAFALEVTG---VPPREIRKRVPAALELVGLSHKHRALP-----AELSGGEQQRVAIARAIVNSPTILIADEP 163 (214)
T ss_pred CCcHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCCHHHhhCCh-----hhcCHHHHHHHHHHHHHHcCCCEEEEeCC
Confidence 9999999988754332 223334456788999999987666543 58999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCeEEEEccCcE
Q 000997 996 TSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGE 1047 (1194)
Q Consensus 996 TsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~ 1047 (1194)
|+|||+.++..+.+.|+++.++|+|||+++|+++ .+.+.+|++++|++ |+
T Consensus 164 t~~LD~~~~~~~~~~l~~~~~~~~tiiivtH~~~-~~~~~~d~i~~l~~-G~ 213 (214)
T cd03292 164 TGNLDPDTTWEIMNLLKKINKAGTTVVVATHAKE-LVDTTRHRVIALER-GK 213 (214)
T ss_pred CCcCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCEEEEEeC-Cc
Confidence 9999999999999999999777999999999976 46667999999985 54
No 155
>COG2274 SunT ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain [Defense mechanisms]
Probab=100.00 E-value=1.4e-35 Score=364.96 Aligned_cols=214 Identities=28% Similarity=0.439 Sum_probs=175.4
Q ss_pred ccceeEeecceeeeecccccccccccccceEEeeeeeEEEeCCcEEEEEccCCCChHHHHhhhcCCCCCCeeEEEEEEcC
Q 000997 813 QPLSMAFGNINYFVDVPVELKQEGVLEDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISG 892 (1194)
Q Consensus 813 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g 892 (1194)
-+-.++|+|++|.+.. .+..+|+|+|++|+|||.+||+|+||||||||+|+|+|+.. +.+|+|.+||
T Consensus 468 ~~g~I~~~nvsf~y~~-----------~~~~vL~~isL~I~~Ge~vaIvG~SGsGKSTL~KLL~gly~--p~~G~I~~dg 534 (709)
T COG2274 468 LQGEIEFENVSFRYGP-----------DDPPVLEDLSLEIPPGEKVAIVGRSGSGKSTLLKLLLGLYK--PQQGRILLDG 534 (709)
T ss_pred cCceEEEEEEEEEeCC-----------CCcchhhceeEEeCCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCceEEECC
Confidence 3457899999988742 33479999999999999999999999999999999999877 5789999999
Q ss_pred ccCC---hhcccceeeEeecCCCCCCCCcHHHHHHHHhhhcCCCcCcHHHHHHHHHHHHHHcCCCc-------ccCCccc
Q 000997 893 YPKR---QETFARISGYCEQNDIHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTS-------LSGALIG 962 (1194)
Q Consensus 893 ~~~~---~~~~~~~~gyv~Q~~~~~~~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~-------~~~~~~~ 962 (1194)
+++. ...+|+.+|||+|++.++.+ |++||+.++. | ..+.+ .+.+++...+..+ -.++.+|
T Consensus 535 ~dl~~i~~~~lR~~ig~V~Q~~~Lf~g-SI~eNi~l~~----p-~~~~e----~i~~A~~~ag~~~fI~~lP~gy~t~v~ 604 (709)
T COG2274 535 VDLNDIDLASLRRQVGYVLQDPFLFSG-SIRENIALGN----P-EATDE----EIIEAAQLAGAHEFIENLPMGYDTPVG 604 (709)
T ss_pred EeHHhcCHHHHHhheeEEcccchhhcC-cHHHHHhcCC----C-CCCHH----HHHHHHHHhCcHHHHHhcccccccccc
Confidence 9864 46788999999999988865 9999998753 2 22221 2233333333322 2344455
Q ss_pred CCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCeEEEE
Q 000997 963 LPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFM 1042 (1194)
Q Consensus 963 ~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~~d~~~~l 1042 (1194)
.. ..+||||||||++|||||+++|+||+||||||+||+.+.+.|++.|.++. +|+|+|+++|+++ .++.||+++||
T Consensus 605 E~-G~~LSGGQrQrlalARaLl~~P~ILlLDEaTSaLD~~sE~~I~~~L~~~~-~~~T~I~IaHRl~--ti~~adrIiVl 680 (709)
T COG2274 605 EG-GANLSGGQRQRLALARALLSKPKILLLDEATSALDPETEAIILQNLLQIL-QGRTVIIIAHRLS--TIRSADRIIVL 680 (709)
T ss_pred cC-CCCCCHHHHHHHHHHHHhccCCCEEEEeCcccccCHhHHHHHHHHHHHHh-cCCeEEEEEccch--HhhhccEEEEc
Confidence 43 46899999999999999999999999999999999999999999999975 5899999999975 67899999999
Q ss_pred ccCcEEEEeCCC
Q 000997 1043 KRGGELIYAGPL 1054 (1194)
Q Consensus 1043 ~~gG~~~~~g~~ 1054 (1194)
+ +|+++..|+.
T Consensus 681 ~-~Gkiv~~gs~ 691 (709)
T COG2274 681 D-QGKIVEQGSH 691 (709)
T ss_pred c-CCceeccCCH
Confidence 8 5899999985
No 156
>PRK11831 putative ABC transporter ATP-binding protein YrbF; Provisional
Probab=100.00 E-value=2.1e-36 Score=339.56 Aligned_cols=203 Identities=19% Similarity=0.300 Sum_probs=171.5
Q ss_pred ceEEeeeeeEEEeCCcEEEEEccCCCChHHHHhhhcCCCCCCeeEEEEEEcCccCChh------cccceeeEeecCCCCC
Q 000997 841 RLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQE------TFARISGYCEQNDIHS 914 (1194)
Q Consensus 841 ~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~------~~~~~~gyv~Q~~~~~ 914 (1194)
++.+|+||||++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++... ..++.++|++|++.++
T Consensus 19 ~~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~i~~~~~~~~~~~~~~i~~v~q~~~~~ 96 (269)
T PRK11831 19 NRCIFDNISLTVPRGKITAIMGPSGIGKTTLLRLIGGQIA--PDHGEILFDGENIPAMSRSRLYTVRKRMSMLFQSGALF 96 (269)
T ss_pred CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEEccccChhhHHHHhhcEEEEecccccC
Confidence 4579999999999999999999999999999999999876 4689999999875421 2356799999999888
Q ss_pred CCCcHHHHHHHHhhhcCCCcCcHHHHHHHHHHHHHHcCCCcccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeC
Q 000997 915 PGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDE 994 (1194)
Q Consensus 915 ~~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illLDE 994 (1194)
+.+|+.||+.+...... ........+.+.++++.+++.+..+..+ ..||||||||++||++|+.+|++|+|||
T Consensus 97 ~~~tv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~gl~~~~~~~~-----~~LSgGq~qrv~laral~~~p~lllLDE 169 (269)
T PRK11831 97 TDMNVFDNVAYPLREHT--QLPAPLLHSTVMMKLEAVGLRGAAKLMP-----SELSGGMARRAALARAIALEPDLIMFDE 169 (269)
T ss_pred CCCCHHHHHHHHHHHcc--CCCHHHHHHHHHHHHHHcCChhhhhCCh-----hhCCHHHHHHHHHHHHHhcCCCEEEEcC
Confidence 99999999987543211 1223333456788899999987766543 5799999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCeEEEEccCcEEEEeCCC
Q 000997 995 PTSGLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1194)
Q Consensus 995 PTsgLD~~~~~~i~~~l~~l~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~ 1054 (1194)
||+|||+.++..+.+.|++++++ |+|||++||++. .+.+.+|++++|+ +|++++.|+.
T Consensus 170 Pt~~LD~~~~~~l~~~l~~~~~~~g~tiiivsH~~~-~~~~~~d~v~~l~-~G~i~~~g~~ 228 (269)
T PRK11831 170 PFVGQDPITMGVLVKLISELNSALGVTCVVVSHDVP-EVLSIADHAYIVA-DKKIVAHGSA 228 (269)
T ss_pred CCccCCHHHHHHHHHHHHHHHHhcCcEEEEEecCHH-HHHHhhCEEEEEE-CCEEEEeCCH
Confidence 99999999999999999999765 899999999976 4677899999998 5899998875
No 157
>TIGR02315 ABC_phnC phosphonate ABC transporter, ATP-binding protein. Phosphonates are a class of phosphorus-containing organic compound with a stable direct C-P bond rather than a C-O-P linkage. A number of bacterial species have operons, typically about 14 genes in size, with genes for ATP-dependent transport of phosphonates, degradation, and regulation of the expression of the system. Members of this protein family are the ATP-binding cassette component of tripartite ABC transporters of phosphonates.
Probab=100.00 E-value=9e-37 Score=338.17 Aligned_cols=206 Identities=27% Similarity=0.338 Sum_probs=170.3
Q ss_pred ceEEeeeeeEEEeCCcEEEEEccCCCChHHHHhhhcCCCCCCeeEEEEEEcCccCCh------hcccceeeEeecCCCCC
Q 000997 841 RLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ------ETFARISGYCEQNDIHS 914 (1194)
Q Consensus 841 ~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~------~~~~~~~gyv~Q~~~~~ 914 (1194)
++.+|+|+|+++++|+++||+||||||||||+++|+|..+ +.+|+|.++|.++.. ..+++.+||++|++.++
T Consensus 14 ~~~il~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~~~~~~~~~~~~~~i~~v~q~~~~~ 91 (243)
T TIGR02315 14 GKQALKNINLNINPGEFVAIIGPSGAGKSTLLRCINRLVE--PSSGSILLEGTDITKLRGKKLRKLRRRIGMIFQHYNLI 91 (243)
T ss_pred CcceeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcC--CCccEEEECCEEhhhCCHHHHHHHHhheEEEcCCCccc
Confidence 3569999999999999999999999999999999999876 468999999987532 12456799999999889
Q ss_pred CCCcHHHHHHHHhhhcC-----CCcCcHHHHHHHHHHHHHHcCCCcccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCE
Q 000997 915 PGLTVLESLLFSAWLRL-----PSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSI 989 (1194)
Q Consensus 915 ~~lTv~e~l~f~~~lr~-----~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~i 989 (1194)
+.+||+||+.+...... ..........+++.++++.+++.+..+.. +..||||||||++||+||+.+|++
T Consensus 92 ~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LSgG~~qrv~la~al~~~p~l 166 (243)
T TIGR02315 92 ERLTVLENVLHGRLGYKPTWRSLLGRFSEEDKERALSALERVGLADKAYQR-----ADQLSGGQQQRVAIARALAQQPDL 166 (243)
T ss_pred ccccHHHHHhhcccccccchhhhhccccHHHHHHHHHHHHHcCcHhhhcCC-----cccCCHHHHHHHHHHHHHhcCCCE
Confidence 99999999976421100 00011123345678899999997766654 358999999999999999999999
Q ss_pred EEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCeEEEEccCcEEEEeCCCC
Q 000997 990 VFMDEPTSGLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLG 1055 (1194)
Q Consensus 990 llLDEPTsgLD~~~~~~i~~~l~~l~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~~ 1055 (1194)
|+|||||+|||+.++..+.+.|++++++ |+|||++||+++ .+.+.||++++|.+ |++++.|+..
T Consensus 167 lllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~tH~~~-~~~~~~d~v~~l~~-G~i~~~~~~~ 231 (243)
T TIGR02315 167 ILADEPIASLDPKTSKQVMDYLKRINKEDGITVIINLHQVD-LAKKYADRIVGLKA-GEIVFDGAPS 231 (243)
T ss_pred EEEeCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhcCeEEEEEC-CEEEecCCHH
Confidence 9999999999999999999999999764 899999999986 46678999999984 7898888753
No 158
>PRK13634 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.2e-36 Score=342.59 Aligned_cols=201 Identities=25% Similarity=0.321 Sum_probs=169.6
Q ss_pred eEEeeeeeEEEeCCcEEEEEccCCCChHHHHhhhcCCCCCCeeEEEEEEcCccCCh-------hcccceeeEeecCCC-C
Q 000997 842 LQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ-------ETFARISGYCEQNDI-H 913 (1194)
Q Consensus 842 ~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~-------~~~~~~~gyv~Q~~~-~ 913 (1194)
..+|+|||++|++||++||+||||||||||+++|+|... +.+|+|.++|+++.. ..+++.+|||+|++. .
T Consensus 20 ~~~L~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~i~~~~~~~~~~~~~~~ig~v~q~~~~~ 97 (290)
T PRK13634 20 RRALYDVNVSIPSGSYVAIIGHTGSGKSTLLQHLNGLLQ--PTSGTVTIGERVITAGKKNKKLKPLRKKVGIVFQFPEHQ 97 (290)
T ss_pred ccceeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCC--CCCcEEEECCEECccccccchHHHHHhhEEEEeeCchhh
Confidence 469999999999999999999999999999999999876 468999999987631 234567999999863 2
Q ss_pred CCCCcHHHHHHHHhhhcCCCcCcHHHHHHHHHHHHHHcCCC-cccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEE
Q 000997 914 SPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELT-SLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFM 992 (1194)
Q Consensus 914 ~~~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~-~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illL 992 (1194)
+...||+||+.|+.... .....+..+.++++++.++|. ...+.. +..|||||||||+||++|+.+|++|||
T Consensus 98 l~~~tv~eni~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----~~~LSgGq~qrv~lAraL~~~P~llll 169 (290)
T PRK13634 98 LFEETVEKDICFGPMNF---GVSEEDAKQKAREMIELVGLPEELLARS-----PFELSGGQMRRVAIAGVLAMEPEVLVL 169 (290)
T ss_pred hhhhhHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHCCCChhhhhCC-----cccCCHHHHHHHHHHHHHHcCCCEEEE
Confidence 33579999999875432 223344446788999999996 555543 358999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCeEEEEccCcEEEEeCCC
Q 000997 993 DEPTSGLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1194)
Q Consensus 993 DEPTsgLD~~~~~~i~~~l~~l~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~ 1054 (1194)
||||+|||+.++..+++.|++++++ |.|||++||+++ .+.+.+||+++|. +|++++.|+.
T Consensus 170 DEPt~~LD~~~~~~l~~~L~~l~~~~g~tviiitHd~~-~~~~~~drv~~l~-~G~i~~~g~~ 230 (290)
T PRK13634 170 DEPTAGLDPKGRKEMMEMFYKLHKEKGLTTVLVTHSME-DAARYADQIVVMH-KGTVFLQGTP 230 (290)
T ss_pred ECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEE-CCEEEEECCH
Confidence 9999999999999999999999765 999999999986 5778899999998 5899999975
No 159
>PRK13647 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.5e-36 Score=339.51 Aligned_cols=201 Identities=25% Similarity=0.324 Sum_probs=170.8
Q ss_pred eEEeeeeeEEEeCCcEEEEEccCCCChHHHHhhhcCCCCCCeeEEEEEEcCccCCh---hcccceeeEeecCCC-CCCCC
Q 000997 842 LQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ---ETFARISGYCEQNDI-HSPGL 917 (1194)
Q Consensus 842 ~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~---~~~~~~~gyv~Q~~~-~~~~l 917 (1194)
..+|+|||+++++||++||+||||||||||+++|+|... +.+|+|.++|.++.. ...++.+||++|++. .++..
T Consensus 18 ~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~~~~~~~ 95 (274)
T PRK13647 18 TKALKGLSLSIPEGSKTALLGPNGAGKSTLLLHLNGIYL--PQRGRVKVMGREVNAENEKWVRSKVGLVFQDPDDQVFSS 95 (274)
T ss_pred CeeeeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCC--CCceEEEECCEECCCCCHHHHHhhEEEEecChhhhhccC
Confidence 469999999999999999999999999999999999876 468999999987643 234567999999863 44568
Q ss_pred cHHHHHHHHhhhcCCCcCcHHHHHHHHHHHHHHcCCCcccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCC
Q 000997 918 TVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTS 997 (1194)
Q Consensus 918 Tv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEPTs 997 (1194)
||.||+.|..... ........+.++++++.++|.+..+..+ ..||||||||++||+||+.+|++|+|||||+
T Consensus 96 tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~~L~~~~~~~~-----~~LSgG~~qrv~laraL~~~p~llllDEPt~ 167 (274)
T PRK13647 96 TVWDDVAFGPVNM---GLDKDEVERRVEEALKAVRMWDFRDKPP-----YHLSYGQKKRVAIAGVLAMDPDVIVLDEPMA 167 (274)
T ss_pred cHHHHHHhhHHHc---CCCHHHHHHHHHHHHHHCCCHHHhcCCh-----hhCCHHHHHHHHHHHHHHcCCCEEEEECCCc
Confidence 9999998864322 2233344456789999999987776653 5899999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCeEEEEccCcEEEEeCCC
Q 000997 998 GLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1194)
Q Consensus 998 gLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~ 1054 (1194)
|||+.++..+++.|++++++|.|||++||+++ .+.+.||++++|+ +|++++.|+.
T Consensus 168 ~LD~~~~~~l~~~l~~~~~~g~tili~tH~~~-~~~~~~d~i~~l~-~G~i~~~g~~ 222 (274)
T PRK13647 168 YLDPRGQETLMEILDRLHNQGKTVIVATHDVD-LAAEWADQVIVLK-EGRVLAEGDK 222 (274)
T ss_pred CCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhCCEEEEEE-CCEEEEECCH
Confidence 99999999999999999877999999999976 4667899999998 5789999875
No 160
>PRK13536 nodulation factor exporter subunit NodI; Provisional
Probab=100.00 E-value=1.9e-36 Score=348.10 Aligned_cols=206 Identities=28% Similarity=0.369 Sum_probs=177.2
Q ss_pred eeeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCceeeEEEECCccCCCCC--CCceEEEEecCCCCCCCCC
Q 000997 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV--PPRTSAYVSQQDWQVAEMT 225 (1194)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~~--~~~~~~yv~Q~d~~~~~lT 225 (1194)
+.+|+|||++|++|++++|+||||||||||+++|+|.+.|+ +|+|.++|.++.... .++.++|++|++.+++.+|
T Consensus 54 ~~~l~~is~~i~~Gei~gLlGpNGaGKSTLl~~L~Gl~~p~---~G~i~i~G~~~~~~~~~~~~~ig~v~q~~~~~~~~t 130 (340)
T PRK13536 54 KAVVNGLSFTVASGECFGLLGPNGAGKSTIARMILGMTSPD---AGKITVLGVPVPARARLARARIGVVPQFDNLDLEFT 130 (340)
T ss_pred EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCCCC---ceEEEECCEECCcchHHHhccEEEEeCCccCCCCCc
Confidence 46999999999999999999999999999999999999886 999999999875432 3467999999999999999
Q ss_pred HHHHHHHhhhccCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhccCcchhHHHHHHHHHhCCcccccccccCccCC
Q 000997 226 VRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEMLK 305 (1194)
Q Consensus 226 V~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~k~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~ 305 (1194)
|+||+.|.+...+... .+....++.+++.+||++..++.++
T Consensus 131 v~e~l~~~~~~~~~~~----------------------------------~~~~~~~~~ll~~~~L~~~~~~~~~----- 171 (340)
T PRK13536 131 VRENLLVFGRYFGMST----------------------------------REIEAVIPSLLEFARLESKADARVS----- 171 (340)
T ss_pred HHHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCCchhhCCChh-----
Confidence 9999987554332100 0011236678899999988888775
Q ss_pred CCChhhhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEcCCe
Q 000997 306 GISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEGQ 385 (1194)
Q Consensus 306 ~LSGGqkqRvsia~al~~~~~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~~G~ 385 (1194)
.|||||||||+||+||+.+|++|+|||||+|||+.++.++++.|++++. . +++|+.++|..+++.++||+|++|++|+
T Consensus 172 ~LS~G~kqrv~lA~aL~~~P~lLiLDEPt~gLD~~~r~~l~~~l~~l~~-~-g~tilisSH~l~e~~~~~d~i~il~~G~ 249 (340)
T PRK13536 172 DLSGGMKRRLTLARALINDPQLLILDEPTTGLDPHARHLIWERLRSLLA-R-GKTILLTTHFMEEAERLCDRLCVLEAGR 249 (340)
T ss_pred hCCHHHHHHHHHHHHHhcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHh-C-CCEEEEECCCHHHHHHhCCEEEEEECCE
Confidence 5999999999999999999999999999999999999999999999875 3 4566668899999999999999999999
Q ss_pred EEEecChhhHHH
Q 000997 386 IVYQGPRVSVLD 397 (1194)
Q Consensus 386 iv~~G~~~~~~~ 397 (1194)
++++|+.+++..
T Consensus 250 i~~~g~~~~l~~ 261 (340)
T PRK13536 250 KIAEGRPHALID 261 (340)
T ss_pred EEEEcCHHHHHh
Confidence 999999988764
No 161
>cd03235 ABC_Metallic_Cations ABC component of the metal-type transporters. This family includes transporters involved in the uptake of various metallic cations such as iron, manganese, and zinc. The ATPases of this group of transporters are very similar to members of iron-siderophore uptake family suggesting that they share a common ancestor. The best characterized metal-type ABC transporters are the YfeABCD system of Y. pestis, the SitABCD system of Salmonella enterica serovar Typhimurium, and the SitABCD transporter of Shigella flexneri. Moreover other uncharacterized homologs of these metal-type transporters are mainly found in pathogens like Haemophilus or enteroinvasive E. coli isolates.
Probab=100.00 E-value=1.2e-36 Score=330.13 Aligned_cols=200 Identities=28% Similarity=0.436 Sum_probs=164.0
Q ss_pred ceEEeeeeeEEEeCCcEEEEEccCCCChHHHHhhhcCCCCCCeeEEEEEEcCccCChhcccceeeEeecCCCCC--CCCc
Q 000997 841 RLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQETFARISGYCEQNDIHS--PGLT 918 (1194)
Q Consensus 841 ~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~~~~~~~gyv~Q~~~~~--~~lT 918 (1194)
++.+|+|+|+++++||+++|+||||||||||+++|+|... +.+|+|.++|.++. ..++.++|++|++.+. ..+|
T Consensus 11 ~~~~l~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~--p~~G~i~~~g~~~~--~~~~~i~~v~q~~~~~~~~~~t 86 (213)
T cd03235 11 GHPVLEDVSFEVKPGEFLAIVGPNGAGKSTLLKAILGLLK--PTSGSIRVFGKPLE--KERKRIGYVPQRRSIDRDFPIS 86 (213)
T ss_pred CEEeeecceeEEcCCCEEEEECCCCCCHHHHHHHHcCCCC--CCCCEEEECCccHH--HHHhheEEeccccccccCCCCc
Confidence 4579999999999999999999999999999999999876 46899999998653 3456799999998763 3479
Q ss_pred HHHHHHHHhhhcCC-CcCcHHHHHHHHHHHHHHcCCCcccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCC
Q 000997 919 VLESLLFSAWLRLP-SEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTS 997 (1194)
Q Consensus 919 v~e~l~f~~~lr~~-~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEPTs 997 (1194)
++||+.+....... .........+.++++++.+++.+..+..+ ..||||||||++||+||+.+|++|+|||||+
T Consensus 87 v~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSgG~~qrv~la~al~~~p~llllDEPt~ 161 (213)
T cd03235 87 VRDVVLMGLYGHKGLFRRLSKADKAKVDEALERVGLSELADRQI-----GELSGGQQQRVLLARALVQDPDLLLLDEPFA 161 (213)
T ss_pred HHHHHHhccccccccccCCCHHHHHHHHHHHHHcCCHHHHhCCc-----ccCCHHHHHHHHHHHHHHcCCCEEEEeCCcc
Confidence 99999875432110 00111223456788999999977666543 5799999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCeEEEEccCcEEEEeC
Q 000997 998 GLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAG 1052 (1194)
Q Consensus 998 gLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g 1052 (1194)
|||+.++..+.+.|++++++|+|||++||+++ ++.+.+|++++|++ | +++.|
T Consensus 162 ~LD~~~~~~l~~~l~~~~~~~~tvi~~sH~~~-~~~~~~d~i~~l~~-~-~~~~g 213 (213)
T cd03235 162 GVDPKTQEDIYELLRELRREGMTILVVTHDLG-LVLEYFDRVLLLNR-T-VVASG 213 (213)
T ss_pred cCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhcCEEEEEcC-c-EeecC
Confidence 99999999999999999878999999999986 46678999999974 5 55544
No 162
>PRK13651 cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.7e-36 Score=342.89 Aligned_cols=202 Identities=25% Similarity=0.336 Sum_probs=170.0
Q ss_pred eEEeeeeeEEEeCCcEEEEEccCCCChHHHHhhhcCCCCCCeeEEEEEEcCccCC-------------------------
Q 000997 842 LQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKR------------------------- 896 (1194)
Q Consensus 842 ~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~------------------------- 896 (1194)
..+|+|||++|++||++||+||||||||||+++|+|..+ +.+|+|.++|.+..
T Consensus 20 ~~~l~~vsl~i~~Ge~v~iiG~nGsGKSTLl~~L~Gl~~--p~~G~i~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (305)
T PRK13651 20 LKALDNVSVEINQGEFIAIIGQTGSGKTTFIEHLNALLL--PDTGTIEWIFKDEKNKKKTKEKEKVLEKLVIQKTRFKKI 97 (305)
T ss_pred ccceeeeEEEEeCCCEEEEECCCCCcHHHHHHHHhCCCC--CCCcEEEEeceeccccccccccccccccccccccccccc
Confidence 359999999999999999999999999999999999876 45799999986531
Q ss_pred --hhcccceeeEeecCC-CCCCCCcHHHHHHHHhhhcCCCcCcHHHHHHHHHHHHHHcCCC-cccCCcccCCCCCCCCHH
Q 000997 897 --QETFARISGYCEQND-IHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELT-SLSGALIGLPGINGLSTE 972 (1194)
Q Consensus 897 --~~~~~~~~gyv~Q~~-~~~~~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~-~~~~~~~~~~~~~~LSgG 972 (1194)
....++.+|||+|++ ..+...||+|++.|+.... ....++..++++++++.++|. +..+.. +..||||
T Consensus 98 ~~~~~~~~~ig~v~Q~~~~~l~~~tv~e~i~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----~~~LSgG 169 (305)
T PRK13651 98 KKIKEIRRRVGVVFQFAEYQLFEQTIEKDIIFGPVSM---GVSKEEAKKRAAKYIELVGLDESYLQRS-----PFELSGG 169 (305)
T ss_pred chHHHHHhceEEEeeCcccccccccHHHHHHhhHHHc---CCCHHHHHHHHHHHHHHcCCChhhhhCC-----hhhCCHH
Confidence 123467799999985 3344579999999875432 233445556788999999996 566654 3589999
Q ss_pred HHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCeEEEEccCcEEEEeC
Q 000997 973 QRKRLTIAVELVANPSIVFMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAG 1052 (1194)
Q Consensus 973 qrqrl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g 1052 (1194)
|||||+||++|+.+|++|+|||||+|||+.++..+++.|+++++.|.|||++||+++ .+.+.+||+++|+ +|++++.|
T Consensus 170 qkqrvalA~aL~~~P~lLlLDEPt~~LD~~~~~~l~~~l~~l~~~g~tiiivtHd~~-~~~~~adrv~vl~-~G~i~~~g 247 (305)
T PRK13651 170 QKRRVALAGILAMEPDFLVFDEPTAGLDPQGVKEILEIFDNLNKQGKTIILVTHDLD-NVLEWTKRTIFFK-DGKIIKDG 247 (305)
T ss_pred HHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeeCHH-HHHHhCCEEEEEE-CCEEEEEC
Confidence 999999999999999999999999999999999999999999877999999999976 4678899999998 57999999
Q ss_pred CCC
Q 000997 1053 PLG 1055 (1194)
Q Consensus 1053 ~~~ 1055 (1194)
+..
T Consensus 248 ~~~ 250 (305)
T PRK13651 248 DTY 250 (305)
T ss_pred CHH
Confidence 863
No 163
>cd03264 ABC_drug_resistance_like ABC-type multidrug transport system, ATPase component. The biological function of this family is not well characterized, but display ABC domains similar to members of ABCA subfamily. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.8e-36 Score=328.30 Aligned_cols=198 Identities=33% Similarity=0.490 Sum_probs=167.8
Q ss_pred ceEEeeeeeEEEeCCcEEEEEccCCCChHHHHhhhcCCCCCCeeEEEEEEcCccCCh--hcccceeeEeecCCCCCCCCc
Q 000997 841 RLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ--ETFARISGYCEQNDIHSPGLT 918 (1194)
Q Consensus 841 ~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~--~~~~~~~gyv~Q~~~~~~~lT 918 (1194)
++.+|+|+||++++| ++||+||||||||||+++|+|..+ +.+|+|.++|.++.. ...++.++|++|++.+++.+|
T Consensus 12 ~~~~l~~vs~~i~~g-~~~i~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~~~~~~~~~~i~~~~q~~~~~~~~t 88 (211)
T cd03264 12 KKRALDGVSLTLGPG-MYGLLGPNGAGKTTLMRILATLTP--PSSGTIRIDGQDVLKQPQKLRRRIGYLPQEFGVYPNFT 88 (211)
T ss_pred CEEEEcceeEEEcCC-cEEEECCCCCCHHHHHHHHhCCCC--CCccEEEECCCccccchHHHHhheEEecCCCcccccCC
Confidence 457999999999999 999999999999999999999876 468999999987542 234567999999999999999
Q ss_pred HHHHHHHHhhhcCCCcCcHHHHHHHHHHHHHHcCCCcccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCC
Q 000997 919 VLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSG 998 (1194)
Q Consensus 919 v~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEPTsg 998 (1194)
|+||+.+....+. ....+..+.++++++.+++.+..+..+ ..||||||||++||++|+.+|++|+|||||+|
T Consensus 89 v~~~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrv~la~al~~~p~llllDEPt~~ 160 (211)
T cd03264 89 VREFLDYIAWLKG---IPSKEVKARVDEVLELVNLGDRAKKKI-----GSLSGGMRRRVGIAQALVGDPSILIVDEPTAG 160 (211)
T ss_pred HHHHHHHHHHHhC---CCHHHHHHHHHHHHHHCCCHHHHhCch-----hhCCHHHHHHHHHHHHHhcCCCEEEEcCCccc
Confidence 9999988654432 222333456788999999987666543 57999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCeEEEEccCcEEEEeC
Q 000997 999 LDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAG 1052 (1194)
Q Consensus 999 LD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g 1052 (1194)
||+.++..+.+.|+++++ +.|||+++|+++ .+.+.+|++++|++ |+++..|
T Consensus 161 LD~~~~~~l~~~l~~~~~-~~tii~vsH~~~-~~~~~~d~i~~l~~-g~i~~~g 211 (211)
T cd03264 161 LDPEERIRFRNLLSELGE-DRIVILSTHIVE-DVESLCNQVAVLNK-GKLVFEG 211 (211)
T ss_pred CCHHHHHHHHHHHHHHhC-CCEEEEEcCCHH-HHHHhCCEEEEEEC-CEEEecC
Confidence 999999999999999875 599999999976 46677999999985 7887654
No 164
>PRK10895 lipopolysaccharide ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.3e-36 Score=334.40 Aligned_cols=204 Identities=25% Similarity=0.360 Sum_probs=172.4
Q ss_pred cceEEeeeeeEEEeCCcEEEEEccCCCChHHHHhhhcCCCCCCeeEEEEEEcCccCCh----hcccceeeEeecCCCCCC
Q 000997 840 DRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ----ETFARISGYCEQNDIHSP 915 (1194)
Q Consensus 840 ~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~----~~~~~~~gyv~Q~~~~~~ 915 (1194)
+++.+|+|+||++++|+++||+||||||||||+++|+|..+ +.+|+|.++|.++.. ...++.++|++|++.+++
T Consensus 14 ~~~~~l~~~sl~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~ 91 (241)
T PRK10895 14 KGRRVVEDVSLTVNSGEIVGLLGPNGAGKTTTFYMVVGIVP--RDAGNIIIDDEDISLLPLHARARRGIGYLPQEASIFR 91 (241)
T ss_pred CCEEEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEECCCCCHHHHHHhCeEEeccCCcccc
Confidence 34579999999999999999999999999999999999876 468999999987642 123567999999998888
Q ss_pred CCcHHHHHHHHhhhcCCCcCcHHHHHHHHHHHHHHcCCCcccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCC
Q 000997 916 GLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEP 995 (1194)
Q Consensus 916 ~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEP 995 (1194)
.+|++||+.+...++. .....+....++++++.+++.+..+.. +..|||||||||+||++|+.+|++|+||||
T Consensus 92 ~~tv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~G~~qrv~laral~~~p~llllDEP 164 (241)
T PRK10895 92 RLSVYDNLMAVLQIRD--DLSAEQREDRANELMEEFHIEHLRDSM-----GQSLSGGERRRVEIARALAANPKFILLDEP 164 (241)
T ss_pred cCcHHHHHhhhhhccc--ccCHHHHHHHHHHHHHHcCCHHHhhcc-----hhhCCHHHHHHHHHHHHHhcCCCEEEEcCC
Confidence 8999999987643221 122233445678899999987665543 358999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCeEEEEccCcEEEEeCCC
Q 000997 996 TSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1194)
Q Consensus 996 TsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~ 1054 (1194)
|+|||+.++..+.+.+++++++|.|||+++|+++ ++.+.+|++++|+ +|++++.|+.
T Consensus 165 t~~LD~~~~~~l~~~l~~~~~~g~tiii~sH~~~-~~~~~~d~v~~l~-~G~i~~~~~~ 221 (241)
T PRK10895 165 FAGVDPISVIDIKRIIEHLRDSGLGVLITDHNVR-ETLAVCERAYIVS-QGHLIAHGTP 221 (241)
T ss_pred cccCCHHHHHHHHHHHHHHHhcCCEEEEEEcCHH-HHHHhcCEEEEEe-CCeEEeeCCH
Confidence 9999999999999999998877999999999975 5778899999998 5789988875
No 165
>PRK13643 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.6e-36 Score=340.47 Aligned_cols=201 Identities=27% Similarity=0.359 Sum_probs=170.4
Q ss_pred eEEeeeeeEEEeCCcEEEEEccCCCChHHHHhhhcCCCCCCeeEEEEEEcCccCCh-------hcccceeeEeecCC--C
Q 000997 842 LQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ-------ETFARISGYCEQND--I 912 (1194)
Q Consensus 842 ~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~-------~~~~~~~gyv~Q~~--~ 912 (1194)
+.+|+|||++|++||++||+||||||||||+++|+|... +.+|+|+++|.++.. ..+++.+|||+|++ .
T Consensus 19 ~~~l~~vsl~i~~Ge~v~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~i~~~~~~~~~~~~~~~ig~v~q~~~~~ 96 (288)
T PRK13643 19 SRALFDIDLEVKKGSYTALIGHTGSGKSTLLQHLNGLLQ--PTEGKVTVGDIVVSSTSKQKEIKPVRKKVGVVFQFPESQ 96 (288)
T ss_pred ccceeeeEEEEcCCCEEEEECCCCChHHHHHHHHhcCCC--CCCcEEEECCEECccccccccHHHHHhhEEEEecCcchh
Confidence 359999999999999999999999999999999999876 468999999987631 23567899999986 3
Q ss_pred CCCCCcHHHHHHHHhhhcCCCcCcHHHHHHHHHHHHHHcCCC-cccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCEEE
Q 000997 913 HSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELT-SLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVF 991 (1194)
Q Consensus 913 ~~~~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~-~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~ill 991 (1194)
+++ .||.|++.|+.... ..+..+.++.+.++++.++|. ...+.. +..||||||||++||++|+.+|+||+
T Consensus 97 l~~-~tv~~~l~~~~~~~---~~~~~~~~~~~~~~l~~~~L~~~~~~~~-----~~~LSgGqkqrvaiA~aL~~~p~ill 167 (288)
T PRK13643 97 LFE-ETVLKDVAFGPQNF---GIPKEKAEKIAAEKLEMVGLADEFWEKS-----PFELSGGQMRRVAIAGILAMEPEVLV 167 (288)
T ss_pred ccc-chHHHHHHhHHHHc---CCCHHHHHHHHHHHHHHcCCChhhccCC-----cccCCHHHHHHHHHHHHHHhCCCEEE
Confidence 444 69999999875432 223445556788999999995 355543 36899999999999999999999999
Q ss_pred EeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCeEEEEccCcEEEEeCCCC
Q 000997 992 MDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLG 1055 (1194)
Q Consensus 992 LDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~~ 1055 (1194)
|||||+|||+.++..+.+.|++++++|+|||++||+++ .+.+.||++++|+ +|++++.|++.
T Consensus 168 LDEPt~gLD~~~~~~l~~~l~~l~~~g~til~vtHd~~-~~~~~~dri~~l~-~G~i~~~g~~~ 229 (288)
T PRK13643 168 LDEPTAGLDPKARIEMMQLFESIHQSGQTVVLVTHLMD-DVADYADYVYLLE-KGHIISCGTPS 229 (288)
T ss_pred EECCccCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHH-HHHHhCCEEEEEE-CCEEEEECCHH
Confidence 99999999999999999999999877999999999986 4667899999998 58999999863
No 166
>cd03225 ABC_cobalt_CbiO_domain1 Domain I of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. This ABC transport system of the CbiMNQO family is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most of cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=100.00 E-value=1.7e-36 Score=328.57 Aligned_cols=193 Identities=28% Similarity=0.393 Sum_probs=162.5
Q ss_pred eEEeeeeeEEEeCCcEEEEEccCCCChHHHHhhhcCCCCCCeeEEEEEEcCccCCh---hcccceeeEeecCCC-CCCCC
Q 000997 842 LQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ---ETFARISGYCEQNDI-HSPGL 917 (1194)
Q Consensus 842 ~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~---~~~~~~~gyv~Q~~~-~~~~l 917 (1194)
+.+|+|+||++++|+++||+||||||||||+++|+|... +.+|+|.++|.++.. ..+++.++|++|++. .++.+
T Consensus 14 ~~il~~vs~~i~~G~~~~l~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~~~~ 91 (211)
T cd03225 14 RPALDDISLTIKKGEFVLIVGPNGSGKSTLLRLLNGLLG--PTSGEVLVDGKDLTKLSLKELRRKVGLVFQNPDDQFFGP 91 (211)
T ss_pred eeeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCC--CCCceEEECCEEcccCCHHHHHhhceEEecChhhhcCCC
Confidence 579999999999999999999999999999999999876 468999999987532 234567999999974 35678
Q ss_pred cHHHHHHHHhhhcCCCcCcHHHHHHHHHHHHHHcCCCcccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCC
Q 000997 918 TVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTS 997 (1194)
Q Consensus 918 Tv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEPTs 997 (1194)
|++||+.+...... .......+.++++++.+++.+..+..+ ..|||||||||+|||||+.+|++|+|||||+
T Consensus 92 t~~~~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSgG~~qrv~laral~~~p~llllDEPt~ 163 (211)
T cd03225 92 TVEEEVAFGLENLG---LPEEEIEERVEEALELVGLEGLRDRSP-----FTLSGGQKQRVAIAGVLAMDPDILLLDEPTA 163 (211)
T ss_pred cHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCcHhhhcCCc-----ccCCHHHHHHHHHHHHHhcCCCEEEEcCCcc
Confidence 99999987643321 222333456788999999976666543 5799999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCeEEEEccC
Q 000997 998 GLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRG 1045 (1194)
Q Consensus 998 gLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~g 1045 (1194)
|||+.++..+++.|++++++|+|||++||+++ ++...||++++|.+|
T Consensus 164 ~LD~~~~~~~~~~l~~~~~~~~tvi~~sH~~~-~~~~~~d~i~~l~~G 210 (211)
T cd03225 164 GLDPAGRRELLELLKKLKAEGKTIIIVTHDLD-LLLELADRVIVLEDG 210 (211)
T ss_pred cCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCEEEEEeCC
Confidence 99999999999999999877999999999976 466679999999853
No 167
>COG4988 CydD ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=4e-35 Score=340.21 Aligned_cols=214 Identities=27% Similarity=0.474 Sum_probs=178.7
Q ss_pred ccceeEeecceeeeecccccccccccccceEEeeeeeEEEeCCcEEEEEccCCCChHHHHhhhcCCCCCCeeEEEEEEcC
Q 000997 813 QPLSMAFGNINYFVDVPVELKQEGVLEDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISG 892 (1194)
Q Consensus 813 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g 892 (1194)
.++.++.+|+++.++ +++++++|+|++++||+.+||+|+||||||||+++|+|..+ +.+|+|.+||
T Consensus 317 ~~~ei~~~~l~~~y~------------~g~~~l~~l~~t~~~g~~talvG~SGaGKSTLl~lL~G~~~--~~~G~I~vng 382 (559)
T COG4988 317 PPIEISLENLSFRYP------------DGKPALSDLNLTIKAGQLTALVGASGAGKSTLLNLLLGFLA--PTQGEIRVNG 382 (559)
T ss_pred CCceeeecceEEecC------------CCCcccCCceeEecCCcEEEEECCCCCCHHHHHHHHhCcCC--CCCceEEECC
Confidence 455666678877663 23489999999999999999999999999999999999987 4689999999
Q ss_pred ccC---ChhcccceeeEeecCCCCCCCCcHHHHHHHHhhhcCCCcCcHHHHHHHHHHHHHHcCCCcccC------CcccC
Q 000997 893 YPK---RQETFARISGYCEQNDIHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSG------ALIGL 963 (1194)
Q Consensus 893 ~~~---~~~~~~~~~gyv~Q~~~~~~~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~------~~~~~ 963 (1194)
.+. +...+++.++||+|++.+++. |++||+.++. + +.+ ++.+.++++..++.+..+ +.+|.
T Consensus 383 ~~l~~l~~~~~~k~i~~v~Q~p~lf~g-TireNi~l~~----~-~~s----~e~i~~al~~a~l~~~v~~p~GLdt~ige 452 (559)
T COG4988 383 IDLRDLSPEAWRKQISWVSQNPYLFAG-TIRENILLAR----P-DAS----DEEIIAALDQAGLLEFVPKPDGLDTVIGE 452 (559)
T ss_pred ccccccCHHHHHhHeeeeCCCCccccc-cHHHHhhccC----C-cCC----HHHHHHHHHHhcHHHhhcCCCcccchhcc
Confidence 875 456789999999999999876 9999998752 2 122 234677888878766554 33443
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCeEEEEc
Q 000997 964 PGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMK 1043 (1194)
Q Consensus 964 ~~~~~LSgGqrqrl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~~d~~~~l~ 1043 (1194)
+.++|||||+|||++||||+.+++++++||||++||.++.+.|++.|.++++ ++|||++||++. ....+|+|++|+
T Consensus 453 -~G~~LSgGQ~QRlaLARAll~~~~l~llDEpTA~LD~etE~~i~~~l~~l~~-~ktvl~itHrl~--~~~~~D~I~vld 528 (559)
T COG4988 453 -GGAGLSGGQAQRLALARALLSPASLLLLDEPTAHLDAETEQIILQALQELAK-QKTVLVITHRLE--DAADADRIVVLD 528 (559)
T ss_pred -CCCCCCHHHHHHHHHHHHhcCCCCEEEecCCccCCCHhHHHHHHHHHHHHHh-CCeEEEEEcChH--HHhcCCEEEEec
Confidence 3478999999999999999999999999999999999999999999999875 599999999964 567789999998
Q ss_pred cCcEEEEeCCCC
Q 000997 1044 RGGELIYAGPLG 1055 (1194)
Q Consensus 1044 ~gG~~~~~g~~~ 1055 (1194)
+|+++..|...
T Consensus 529 -~G~l~~~g~~~ 539 (559)
T COG4988 529 -NGRLVEQGTHE 539 (559)
T ss_pred -CCceeccCCHH
Confidence 58999988753
No 168
>KOG0057 consensus Mitochondrial Fe/S cluster exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=1.4e-36 Score=345.96 Aligned_cols=229 Identities=24% Similarity=0.357 Sum_probs=186.7
Q ss_pred cCCCCCCceEEEeeeEEEEEEecCCCCCCChhHHHHHHHHHHHHHHhHhcCCCcceeeeecceEeEeCCeEEEEEcCCCC
Q 000997 93 VDLELPKIEVRFQNLTVESFVHLGSRALPTIPNFIFNMTEALLRQLRIYRGNRSKLTILDDLSGIIRPSRLTLLLGPPSS 172 (1194)
Q Consensus 93 ~~~~~p~~~v~~~~l~v~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~llGp~Gs 172 (1194)
..+..|.=.|+|+|++.+-. ++++||+++||+|++||.+||+|+|||
T Consensus 343 ~~i~~~~~~I~F~dV~f~y~---------------------------------~k~~iL~gvsf~I~kGekVaIvG~nGs 389 (591)
T KOG0057|consen 343 LPIELFGGSIEFDDVHFSYG---------------------------------PKRKVLKGVSFTIPKGEKVAIVGSNGS 389 (591)
T ss_pred CCcccCCCcEEEEeeEEEeC---------------------------------CCCceecceeEEecCCCEEEEECCCCC
Confidence 45666777899999886531 234599999999999999999999999
Q ss_pred cHHHHHHHHhcCcCCCCceeeEEEECCccCCCCCC---CceEEEEecCCCCCCCCCHHHHHHHhhhccCCCCchhhhHHH
Q 000997 173 GKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVP---PRTSAYVSQQDWQVAEMTVRETLDFAGQCQGVGSKYDMITEL 249 (1194)
Q Consensus 173 GKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~ 249 (1194)
||||+|++|.+.++ + +|+|.+||.++.+..+ ++.+|||||+..+|.+ ||.+||.++.. ...++.+.+.
T Consensus 390 GKSTilr~LlrF~d-~---sG~I~IdG~dik~~~~~SlR~~Ig~VPQd~~LFnd-TIl~NI~YGn~----sas~eeV~e~ 460 (591)
T KOG0057|consen 390 GKSTILRLLLRFFD-Y---SGSILIDGQDIKEVSLESLRQSIGVVPQDSVLFND-TILYNIKYGNP----SASDEEVVEA 460 (591)
T ss_pred CHHHHHHHHHHHhc-c---CCcEEECCeeHhhhChHHhhhheeEeCCcccccch-hHHHHhhcCCC----CcCHHHHHHH
Confidence 99999999999887 4 9999999999887654 6889999999887765 99999998632 2334555555
Q ss_pred HHHHHHhCCCCCchHHHHHHHhhccCcchhHHHHHHHHHhCCcccccccccCccCCCCChhhhhHHHHHHHHhCCCcEeE
Q 000997 250 ARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEMLKGISGGQKKRLTTGELLVGPARVLF 329 (1194)
Q Consensus 250 ~~~e~~~~~~~~~d~~~~~k~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~LSGGqkqRvsia~al~~~~~vll 329 (1194)
|++.. + .|. ...|++.++|.||+++. -|||||||||++|||++.+|+|++
T Consensus 461 ~k~a~---~-----------------------hd~---i~~l~~GY~T~VGerG~-~LSGGekQrvslaRa~lKda~Il~ 510 (591)
T KOG0057|consen 461 CKRAG---L-----------------------HDV---ISRLPDGYQTLVGERGL-MLSGGEKQRVSLARAFLKDAPILL 510 (591)
T ss_pred HHHcC---c-----------------------HHH---HHhccccchhhHhhccc-ccccchHHHHHHHHHHhcCCCeEE
Confidence 54321 1 111 23588999999998765 599999999999999999999999
Q ss_pred EecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEcCCeEEEecChhhHHH
Q 000997 330 MDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEGQIVYQGPRVSVLD 397 (1194)
Q Consensus 330 lDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~~G~iv~~G~~~~~~~ 397 (1194)
+|||||+||+.|..+|++.+... ..++|+|+ +.|... +..-||+|++|++|++...|+.++++.
T Consensus 511 ~DEaTS~LD~~TE~~i~~~i~~~--~~~rTvI~-IvH~l~-ll~~~DkI~~l~nG~v~e~gth~ell~ 574 (591)
T KOG0057|consen 511 LDEATSALDSETEREILDMIMDV--MSGRTVIM-IVHRLD-LLKDFDKIIVLDNGTVKEYGTHSELLA 574 (591)
T ss_pred ecCcccccchhhHHHHHHHHHHh--cCCCeEEE-EEecch-hHhcCCEEEEEECCeeEEeccHHHHhh
Confidence 99999999999999999999973 23455554 556654 567899999999999999999999975
No 169
>cd03262 ABC_HisP_GlnQ_permeases HisP and GlnQ are the ATP-binding components of the bacterial periplasmic histidine and glutamine permeases, repectively. Histidine permease is a multisubunit complex containing the HisQ and HisM integral membrane subunits and two copies of HisP. HisP has properties intermediate between those of integral and peripheral membrane proteins and is accessible from both sides of the membrane, presumably by its interaction with HisQ and HisM. The two HisP subunits form a homodimer within the complex. The domain structure of the amino acid uptake systems is typical for prokaryote extracellular solute binding protein-dependent uptake systems. All of the amino acid uptake systems also have at least one, and in a few cases, two extracellular solute binding proteins located in the periplasm of Gram-negative bacteria, or attached to the cell membrane of Gram-positive bacteria. The best-studied member of the PAAT (polar amino acid transport) family is the HisJQM
Probab=100.00 E-value=1.8e-36 Score=328.95 Aligned_cols=196 Identities=27% Similarity=0.371 Sum_probs=166.1
Q ss_pred ceEEeeeeeEEEeCCcEEEEEccCCCChHHHHhhhcCCCCCCeeEEEEEEcCccCCh-----hcccceeeEeecCCCCCC
Q 000997 841 RLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ-----ETFARISGYCEQNDIHSP 915 (1194)
Q Consensus 841 ~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~-----~~~~~~~gyv~Q~~~~~~ 915 (1194)
++.+|+++||+++||+++||+||||||||||+++|+|..+ +.+|+|.++|.+... ..+++.++|++|++.+++
T Consensus 12 ~~~~l~~~s~~i~~G~~~~l~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~~~ 89 (213)
T cd03262 12 DFHVLKGIDLTVKKGEVVVIIGPSGSGKSTLLRCINLLEE--PDSGTIIIDGLKLTDDKKNINELRQKVGMVFQQFNLFP 89 (213)
T ss_pred CeEeecCceEEECCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEECCccchhHHHHHhcceEEecccccCC
Confidence 3579999999999999999999999999999999999876 468999999987631 234678999999999999
Q ss_pred CCcHHHHHHHHhhhcCCCcCcHHHHHHHHHHHHHHcCCCcccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCC
Q 000997 916 GLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEP 995 (1194)
Q Consensus 916 ~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEP 995 (1194)
.+|++||+.+...... .....+..+.++++++.+++.+..+..+ ..||||||||++||++|+.+|++|+||||
T Consensus 90 ~~t~~e~l~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrv~la~al~~~p~llllDEP 162 (213)
T cd03262 90 HLTVLENITLAPIKVK--GMSKAEAEERALELLEKVGLADKADAYP-----AQLSGGQQQRVAIARALAMNPKVMLFDEP 162 (213)
T ss_pred CCcHHHHHHhHHHHhc--CCCHHHHHHHHHHHHHHcCCHhHhhhCc-----cccCHHHHHHHHHHHHHhcCCCEEEEeCC
Confidence 9999999987642111 1223334456788999999977666543 58999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCeEEEEccCcE
Q 000997 996 TSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGE 1047 (1194)
Q Consensus 996 TsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~ 1047 (1194)
|+|||+.++..+.+.|++++++|+|||+++|+++ ++.+.+|++++|++ |+
T Consensus 163 ~~~LD~~~~~~l~~~l~~~~~~~~tvi~~sh~~~-~~~~~~d~i~~l~~-g~ 212 (213)
T cd03262 163 TSALDPELVGEVLDVMKDLAEEGMTMVVVTHEMG-FAREVADRVIFMDD-GR 212 (213)
T ss_pred ccCCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCEEEEEeC-Cc
Confidence 9999999999999999999877999999999986 56678999999985 54
No 170
>PRK10619 histidine/lysine/arginine/ornithine transporter subunit; Provisional
Probab=100.00 E-value=6.4e-36 Score=333.83 Aligned_cols=202 Identities=22% Similarity=0.316 Sum_probs=171.0
Q ss_pred ceEEeeeeeEEEeCCcEEEEEccCCCChHHHHhhhcCCCCCCeeEEEEEEcCccCCh----------------hccccee
Q 000997 841 RLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ----------------ETFARIS 904 (1194)
Q Consensus 841 ~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~----------------~~~~~~~ 904 (1194)
++.+|+|+||++++||+++|+|+||||||||+++|+|..+ +.+|+|.++|.++.. ..+++.+
T Consensus 17 ~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~--~~~G~i~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i 94 (257)
T PRK10619 17 EHEVLKGVSLQANAGDVISIIGSSGSGKSTFLRCINFLEK--PSEGSIVVNGQTINLVRDKDGQLKVADKNQLRLLRTRL 94 (257)
T ss_pred CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCeEEEECCEEcccccccccccccccchHHHHHhhce
Confidence 4579999999999999999999999999999999999876 468999999986531 2345679
Q ss_pred eEeecCCCCCCCCcHHHHHHHHhh-hcCCCcCcHHHHHHHHHHHHHHcCCCccc-CCcccCCCCCCCCHHHHHHHHHHHH
Q 000997 905 GYCEQNDIHSPGLTVLESLLFSAW-LRLPSEIELETQRAFVEEVMELVELTSLS-GALIGLPGINGLSTEQRKRLTIAVE 982 (1194)
Q Consensus 905 gyv~Q~~~~~~~lTv~e~l~f~~~-lr~~~~~~~~~~~~~v~~~l~~l~l~~~~-~~~~~~~~~~~LSgGqrqrl~ia~a 982 (1194)
+|++|++.+++.+|++||+.+... .. ........+.+.++++.+++.+.. +.. +..||||||||++||||
T Consensus 95 ~~v~q~~~l~~~~sv~enl~~~~~~~~---~~~~~~~~~~~~~~l~~~gl~~~~~~~~-----~~~LS~G~~qrv~lara 166 (257)
T PRK10619 95 TMVFQHFNLWSHMTVLENVMEAPIQVL---GLSKQEARERAVKYLAKVGIDERAQGKY-----PVHLSGGQQQRVSIARA 166 (257)
T ss_pred EEEecCcccCCCCcHHHHHHHHHHHhC---CCCHHHHHHHHHHHHHHcCCChhhhhCC-----cccCCHHHHHHHHHHHH
Confidence 999999999999999999987542 21 122334456678899999997653 432 35899999999999999
Q ss_pred HhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCeEEEEccCcEEEEeCCC
Q 000997 983 LVANPSIVFMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1194)
Q Consensus 983 L~~~p~illLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~ 1054 (1194)
|+.+|++|+|||||+|||+.++..+.+.|++++++|+|||+++|+++ .+...||++++|.+ |++++.|+.
T Consensus 167 l~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~g~tiiivsH~~~-~~~~~~d~i~~l~~-G~i~~~~~~ 236 (257)
T PRK10619 167 LAMEPEVLLFDEPTSALDPELVGEVLRIMQQLAEEGKTMVVVTHEMG-FARHVSSHVIFLHQ-GKIEEEGAP 236 (257)
T ss_pred HhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhcCEEEEEEC-CEEEEeCCH
Confidence 99999999999999999999999999999999877999999999986 46667999999985 789988874
No 171
>PRK10908 cell division protein FtsE; Provisional
Probab=100.00 E-value=2.9e-36 Score=329.24 Aligned_cols=196 Identities=26% Similarity=0.333 Sum_probs=166.4
Q ss_pred eEEeeeeeEEEeCCcEEEEEccCCCChHHHHhhhcCCCCCCeeEEEEEEcCccCCh---h---cccceeeEeecCCCCCC
Q 000997 842 LQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ---E---TFARISGYCEQNDIHSP 915 (1194)
Q Consensus 842 ~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~---~---~~~~~~gyv~Q~~~~~~ 915 (1194)
+.+|+|+|+++++||++||+||||||||||+++|+|..+ +.+|+|.++|.++.. . .+++.++|++|++.+++
T Consensus 15 ~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~i~~~~~~~~~~~~~~i~~~~q~~~~~~ 92 (222)
T PRK10908 15 RQALQGVTFHMRPGEMAFLTGHSGAGKSTLLKLICGIER--PSAGKIWFSGHDITRLKNREVPFLRRQIGMIFQDHHLLM 92 (222)
T ss_pred CeEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEEcccCChhHHHHHHhheEEEecCccccc
Confidence 469999999999999999999999999999999999876 468999999987532 1 24567999999998888
Q ss_pred CCcHHHHHHHHhhhcCCCcCcHHHHHHHHHHHHHHcCCCcccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCC
Q 000997 916 GLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEP 995 (1194)
Q Consensus 916 ~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEP 995 (1194)
.+|++||+.+....+ .....+..+.++++++.+++.+..+.. +..||||||||++|||||+.+|++|+||||
T Consensus 93 ~~tv~~~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~G~~qrv~laral~~~p~llllDEP 164 (222)
T PRK10908 93 DRTVYDNVAIPLIIA---GASGDDIRRRVSAALDKVGLLDKAKNF-----PIQLSGGEQQRVGIARAVVNKPAVLLADEP 164 (222)
T ss_pred cccHHHHHHhHHHhc---CCCHHHHHHHHHHHHHHcCChhhhhCC-----chhCCHHHHHHHHHHHHHHcCCCEEEEeCC
Confidence 999999998865433 122333445678889999988766654 357999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCeEEEEccCcEEE
Q 000997 996 TSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELI 1049 (1194)
Q Consensus 996 TsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~ 1049 (1194)
|+|||+.++..+.+.|+++.++|.|||+++|+++ ++...+|++++|.+ |+++
T Consensus 165 t~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~-G~i~ 216 (222)
T PRK10908 165 TGNLDDALSEGILRLFEEFNRVGVTVLMATHDIG-LISRRSYRMLTLSD-GHLH 216 (222)
T ss_pred CCcCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEc
Confidence 9999999999999999999777899999999986 46677999999985 6654
No 172
>TIGR03864 PQQ_ABC_ATP ABC transporter, ATP-binding subunit, PQQ-dependent alcohol dehydrogenase system. Members of this protein family are the ATP-binding subunit of an ABC transporter system that is associated with PQQ biosynthesis and PQQ-dependent alcohol dehydrogenases. While this family shows homology to several efflux ABC transporter subunits, the presence of a periplasmic substrate-binding protein and association with systems for catabolism of alcohols suggests a role in import rather than detoxification.
Probab=100.00 E-value=4.4e-36 Score=330.93 Aligned_cols=201 Identities=27% Similarity=0.421 Sum_probs=169.3
Q ss_pred ceEEeeeeeEEEeCCcEEEEEccCCCChHHHHhhhcCCCCCCeeEEEEEEcCccCCh--hcccceeeEeecCCCCCCCCc
Q 000997 841 RLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ--ETFARISGYCEQNDIHSPGLT 918 (1194)
Q Consensus 841 ~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~--~~~~~~~gyv~Q~~~~~~~lT 918 (1194)
++.+|+|+|+++++||++||+||||||||||+++|+|..+ +.+|+|.++|.++.. ....+.++|++|++.+++.+|
T Consensus 13 ~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--p~~G~i~~~g~~i~~~~~~~~~~i~~~~q~~~~~~~~t 90 (236)
T TIGR03864 13 ARRALDDVSFTVRPGEFVALLGPNGAGKSTLFSLLTRLYV--AQEGQISVAGHDLRRAPRAALARLGVVFQQPTLDLDLS 90 (236)
T ss_pred CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCcC--CCceEEEECCEEcccCChhhhhhEEEeCCCCCCcccCc
Confidence 4579999999999999999999999999999999999876 468999999987532 122357899999998888999
Q ss_pred HHHHHHHHhhhcCCCcCcHHHHHHHHHHHHHHcCCCcccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCC
Q 000997 919 VLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSG 998 (1194)
Q Consensus 919 v~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEPTsg 998 (1194)
++||+.+.+..+ ........+.++++++.+++.+..+..+ ..||||||||++|||+|+.+|+||+|||||+|
T Consensus 91 ~~~~l~~~~~~~---~~~~~~~~~~~~~~l~~~gl~~~~~~~~-----~~LS~G~~qrl~laral~~~p~llllDEP~~~ 162 (236)
T TIGR03864 91 VRQNLRYHAALH---GLSRAEARERIAALLARLGLAERADDKV-----RELNGGHRRRVEIARALLHRPALLLLDEPTVG 162 (236)
T ss_pred HHHHHHHHHHhc---CCCHHHHHHHHHHHHHHcCChhhhcCCh-----hhCCHHHHHHHHHHHHHhcCCCEEEEcCCccC
Confidence 999998765433 1223334456788999999987666543 57999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHh-CCCEEEEEecCCcHHHHHhcCeEEEEccCcEEEEeCCC
Q 000997 999 LDARAAAIVMRTVRNIVN-TGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1194)
Q Consensus 999 LD~~~~~~i~~~l~~l~~-~g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~ 1054 (1194)
||+.++..+.+.|+++++ +|.|||+++|+++. + +.+|++++|++ |++++.|+.
T Consensus 163 LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~-~-~~~d~i~~l~~-G~i~~~~~~ 216 (236)
T TIGR03864 163 LDPASRAAIVAHVRALCRDQGLSVLWATHLVDE-I-EADDRLVVLHR-GRVLADGAA 216 (236)
T ss_pred CCHHHHHHHHHHHHHHHHhCCCEEEEEecChhh-H-hhCCEEEEEeC-CeEEEeCCH
Confidence 999999999999999975 58999999999863 4 45999999984 788888864
No 173
>TIGR03740 galliderm_ABC gallidermin-class lantibiotic protection ABC transporter, ATP-binding subunit. Model TIGR03731 represents the family of all lantibiotics related to gallidermin, including epidermin, mutatin, and nisin. This protein family describes the ATP-binding subunit of a gallidermin/epidermin class lantibiotic protection transporter. It is largely restricted to gallidermin-family lantibiotic biosynthesis and export cassettes, but also occurs in orphan transporter cassettes in species that lack candidate lantibiotic precursor and synthetase genes.
Probab=100.00 E-value=4.7e-36 Score=327.87 Aligned_cols=198 Identities=25% Similarity=0.376 Sum_probs=170.6
Q ss_pred ceEEeeeeeEEEeCCcEEEEEccCCCChHHHHhhhcCCCCCCeeEEEEEEcCccCChhcccceeeEeecCCCCCCCCcHH
Q 000997 841 RLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQETFARISGYCEQNDIHSPGLTVL 920 (1194)
Q Consensus 841 ~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~~~~~~~gyv~Q~~~~~~~lTv~ 920 (1194)
++.+|+|+||++++||++||+||||||||||+++|+|..+ +.+|+|.++|.+..... .+.++|++|++.+++.+|++
T Consensus 12 ~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~~~~~~~~~-~~~~~~~~q~~~~~~~~t~~ 88 (223)
T TIGR03740 12 KQTAVNNISLTVPKNSVYGLLGPNGAGKSTLLKMITGILR--PTSGEIIFDGHPWTRKD-LHKIGSLIESPPLYENLTAR 88 (223)
T ss_pred CEEEEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEeccccc-cccEEEEcCCCCccccCCHH
Confidence 4579999999999999999999999999999999999876 56899999998764322 25789999999888889999
Q ss_pred HHHHHHhhhcCCCcCcHHHHHHHHHHHHHHcCCCcccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCC
Q 000997 921 ESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSGLD 1000 (1194)
Q Consensus 921 e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEPTsgLD 1000 (1194)
||+.+....+. .. ...+.++++.+++.+..+..+ ..||+|||||++||++|+.+|++|+|||||+|||
T Consensus 89 ~~~~~~~~~~~---~~----~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~~rv~laral~~~p~llllDEP~~~LD 156 (223)
T TIGR03740 89 ENLKVHTTLLG---LP----DSRIDEVLNIVDLTNTGKKKA-----KQFSLGMKQRLGIAIALLNHPKLLILDEPTNGLD 156 (223)
T ss_pred HHHHHHHHHcC---CC----HHHHHHHHHHcCCcHHHhhhH-----hhCCHHHHHHHHHHHHHhcCCCEEEECCCccCCC
Confidence 99987654331 11 234678899999987766543 5799999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCeEEEEccCcEEEEeCCCC
Q 000997 1001 ARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLG 1055 (1194)
Q Consensus 1001 ~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~~ 1055 (1194)
+.++..+++.|++++++|+|||++||+++ .+.+.+|++++|. +|++++.|++.
T Consensus 157 ~~~~~~l~~~L~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~-~g~i~~~~~~~ 209 (223)
T TIGR03740 157 PIGIQELRELIRSFPEQGITVILSSHILS-EVQQLADHIGIIS-EGVLGYQGKIN 209 (223)
T ss_pred HHHHHHHHHHHHHHHHCCCEEEEEcCCHH-HHHHhcCEEEEEe-CCEEEEecChh
Confidence 99999999999999877999999999986 4667899999998 47999999864
No 174
>cd03257 ABC_NikE_OppD_transporters The ABC transporter subfamily specific for the transport of dipeptides, oligopeptides (OppD), and nickel (NikDE). The NikABCDE system of E. coli belongs to this family and is composed of the periplasmic binding protein NikA, two integral membrane components (NikB and NikC), and two ATPase (NikD and NikE). The NikABCDE transporter is synthesized under anaerobic conditions to meet the increased demand for nickel resulting from hydrogenase synthesis. The molecular mechanism of nickel uptake in many bacteria and most archaea is not known. Many other members of this ABC family are also involved in the uptake of dipeptides and oligopeptides. The oligopeptide transport system (Opp) is a five-component ABC transport composed of a membrane-anchored substrate binding proteins (SRP), OppA, two transmembrane proteins, OppB and OppC, and two ATP-binding domains, OppD and OppF.
Probab=100.00 E-value=3.2e-36 Score=330.56 Aligned_cols=200 Identities=25% Similarity=0.310 Sum_probs=163.1
Q ss_pred EEeeeeeEEEeCCcEEEEEccCCCChHHHHhhhcCCCCCCeeEEEEEEcCccCCh------hcccceeeEeecCC--CCC
Q 000997 843 QLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ------ETFARISGYCEQND--IHS 914 (1194)
Q Consensus 843 ~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~------~~~~~~~gyv~Q~~--~~~ 914 (1194)
.+|+|+|+++++||++||+||||||||||+++|+|... +.+|+|.++|.++.. ..+++.+||++|++ .+.
T Consensus 19 ~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~~~~~~~~~~~~~i~~~~q~~~~~~~ 96 (228)
T cd03257 19 KALDDVSFSIKKGETLGLVGESGSGKSTLARAILGLLK--PTSGSIIFDGKDLLKLSRRLRKIRRKEIQMVFQDPMSSLN 96 (228)
T ss_pred eeecCceeEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEEccccchhhHHHhhccEEEEecCchhhcC
Confidence 69999999999999999999999999999999999876 468999999987642 23456899999998 456
Q ss_pred CCCcHHHHHHHHhhhcCCCcCcHHHHHHHHHHHHHHcCCC-cccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEe
Q 000997 915 PGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELT-SLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMD 993 (1194)
Q Consensus 915 ~~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~-~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illLD 993 (1194)
+.+||+||+.+......+. .........++++++.+++. ...+.. +..||||||||++|||+|+.+|++|+||
T Consensus 97 ~~~tv~~nl~~~~~~~~~~-~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~~LS~G~~qrv~laral~~~p~lllLD 170 (228)
T cd03257 97 PRMTIGEQIAEPLRIHGKL-SKKEARKEAVLLLLVGVGLPEEVLNRY-----PHELSGGQRQRVAIARALALNPKLLIAD 170 (228)
T ss_pred CcCCHHHHHHHHHHhccCC-cHHHHHHHHHHHHHHHCCCChhHhhCC-----chhcCHHHHHHHHHHHHHhcCCCEEEec
Confidence 7899999998765433211 11111122235788888884 444443 3579999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCeEEEEccCcEEEEeC
Q 000997 994 EPTSGLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAG 1052 (1194)
Q Consensus 994 EPTsgLD~~~~~~i~~~l~~l~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g 1052 (1194)
|||+|||+.++..+.+.|++++++ |+|||+++|+++ .+...+|++++|+ +|+++..|
T Consensus 171 EPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~-~~~~~~d~i~~l~-~G~i~~~g 228 (228)
T cd03257 171 EPTSALDVSVQAQILDLLKKLQEELGLTLLFITHDLG-VVAKIADRVAVMY-AGKIVEEG 228 (228)
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhcCeEEEEe-CCEEEecC
Confidence 999999999999999999999765 899999999986 4666899999998 47887654
No 175
>cd03296 ABC_CysA_sulfate_importer Part of the ABC transporter complex cysAWTP involved in sulfate import. Responsible for energy coupling to the transport system. The complex is composed of two ATP-binding proteins (cysA), two transmembrane proteins (cysT and cysW), and a solute-binding protein (cysP). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=8e-36 Score=329.51 Aligned_cols=209 Identities=29% Similarity=0.396 Sum_probs=172.4
Q ss_pred eeeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCceeeEEEECCccCCCCCC-CceEEEEecCCCCCCCCCH
Q 000997 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVP-PRTSAYVSQQDWQVAEMTV 226 (1194)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lTV 226 (1194)
.++|+|+|+++++|++++|+|||||||||||++|+|.+++. +|+|.++|.++..... ++.++|++|++.+++.+||
T Consensus 15 ~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~i~~v~q~~~~~~~~tv 91 (239)
T cd03296 15 FVALDDVSLDIPSGELVALLGPSGSGKTTLLRLIAGLERPD---SGTILFGGEDATDVPVQERNVGFVFQHYALFRHMTV 91 (239)
T ss_pred EEeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEECCcCCccccceEEEecCCcccCCCCH
Confidence 36999999999999999999999999999999999998775 9999999988654322 4579999999988889999
Q ss_pred HHHHHHhhhccCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhccCcchhHHHHHHHHHhCCcccccccccCccCCC
Q 000997 227 RETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEMLKG 306 (1194)
Q Consensus 227 ~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~k~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~ 306 (1194)
+||+.|+....+...+.+ . .+....++.+++.+||.+..++.++ .
T Consensus 92 ~e~l~~~~~~~~~~~~~~-----------------~-------------~~~~~~~~~~l~~~~l~~~~~~~~~-----~ 136 (239)
T cd03296 92 FDNVAFGLRVKPRSERPP-----------------E-------------AEIRAKVHELLKLVQLDWLADRYPA-----Q 136 (239)
T ss_pred HHHHhhhhhhccccccCC-----------------H-------------HHHHHHHHHHHHHcCChhhhhcChh-----h
Confidence 999988643221100000 0 0011236778999999876666554 6
Q ss_pred CChhhhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEcCCeE
Q 000997 307 ISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEGQI 386 (1194)
Q Consensus 307 LSGGqkqRvsia~al~~~~~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~~G~i 386 (1194)
|||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|+++++.. +++|+.++|+.+++..++|+|++|++|++
T Consensus 137 LS~G~~qrl~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~-~~tvii~sH~~~~~~~~~d~i~~l~~G~i 215 (239)
T cd03296 137 LSGGQRQRVALARALAVEPKVLLLDEPFGALDAKVRKELRRWLRRLHDEL-HVTTVFVTHDQEEALEVADRVVVMNKGRI 215 (239)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHhCCEEEEEECCeE
Confidence 99999999999999999999999999999999999999999999987533 34566677888889999999999999999
Q ss_pred EEecChhhH
Q 000997 387 VYQGPRVSV 395 (1194)
Q Consensus 387 v~~G~~~~~ 395 (1194)
++.|+.+++
T Consensus 216 ~~~~~~~~~ 224 (239)
T cd03296 216 EQVGTPDEV 224 (239)
T ss_pred EEecCHHHH
Confidence 999988765
No 176
>COG1137 YhbG ABC-type (unclassified) transport system, ATPase component [General function prediction only]
Probab=100.00 E-value=4.3e-37 Score=308.24 Aligned_cols=209 Identities=20% Similarity=0.341 Sum_probs=180.6
Q ss_pred ceeeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCceeeEEEECCccCCCCCCC----ceEEEEecCCCCCC
Q 000997 147 KLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVPP----RTSAYVSQQDWQVA 222 (1194)
Q Consensus 147 ~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~~~~----~~~~yv~Q~d~~~~ 222 (1194)
++++++|||+.+++||+++++|||||||||.+.++.|+..++ +|+|.++|.+++..... .-+||.||++..|-
T Consensus 16 kr~Vv~~Vsl~v~~GEiVGLLGPNGAGKTT~Fymi~Glv~~d---~G~i~ld~~diT~lPm~~RArlGigYLpQE~SIFr 92 (243)
T COG1137 16 KRKVVNDVSLEVNSGEIVGLLGPNGAGKTTTFYMIVGLVRPD---SGKILLDDEDITKLPMHKRARLGIGYLPQEASIFR 92 (243)
T ss_pred CeeeeeeeeEEEcCCcEEEEECCCCCCceeEEEEEEEEEecC---CceEEECCcccccCChHHHhhcCcccccccchHhh
Confidence 357999999999999999999999999999999999999887 99999999999887643 45899999999999
Q ss_pred CCCHHHHHHHhhhccCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhccCcchhHHHHHHHHHhCCcccccccccCc
Q 000997 223 EMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDE 302 (1194)
Q Consensus 223 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~k~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~ 302 (1194)
.+||+|||.-....+....+ ..+.+.+.+.+|+.|+|.|+++..-.
T Consensus 93 ~LtV~dNi~~vlE~~~~d~~--------------------------------~~~~~~~l~~LL~ef~i~hlr~~~a~-- 138 (243)
T COG1137 93 KLTVEDNIMAVLEIREKDLK--------------------------------KAERKEELDALLEEFHITHLRDSKAY-- 138 (243)
T ss_pred cCcHHHHHHHHHhhhhcchh--------------------------------HHHHHHHHHHHHHHhchHHHhcCccc--
Confidence 99999999876544321100 01123347899999999999987643
Q ss_pred cCCCCChhhhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEc
Q 000997 303 MLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLS 382 (1194)
Q Consensus 303 ~~~~LSGGqkqRvsia~al~~~~~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~ 382 (1194)
.||||||+|+.|||||+.+|+.++||||++|+||-+..+|.+.++.+... +.-|+..-|+..|+...+||.++++
T Consensus 139 ---sLSGGERRR~EIARaLa~~P~fiLLDEPFAGVDPiaV~dIq~iI~~L~~r--giGvLITDHNVREtL~i~dRaYIi~ 213 (243)
T COG1137 139 ---SLSGGERRRVEIARALAANPKFILLDEPFAGVDPIAVIDIQRIIKHLKDR--GIGVLITDHNVRETLDICDRAYIIS 213 (243)
T ss_pred ---ccccchHHHHHHHHHHhcCCCEEEecCCccCCCchhHHHHHHHHHHHHhC--CceEEEccccHHHHHhhhheEEEEe
Confidence 59999999999999999999999999999999999999999999999763 4555557799999999999999999
Q ss_pred CCeEEEecChhhHHH
Q 000997 383 EGQIVYQGPRVSVLD 397 (1194)
Q Consensus 383 ~G~iv~~G~~~~~~~ 397 (1194)
+|++..+|+++++.+
T Consensus 214 ~G~vla~G~p~ei~~ 228 (243)
T COG1137 214 DGKVLAEGSPEEIVN 228 (243)
T ss_pred cCeEEecCCHHHHhc
Confidence 999999999998853
No 177
>PRK11247 ssuB aliphatic sulfonates transport ATP-binding subunit; Provisional
Probab=100.00 E-value=4.8e-36 Score=333.05 Aligned_cols=206 Identities=21% Similarity=0.289 Sum_probs=173.3
Q ss_pred eeEeecceeeeecccccccccccccceEEeeeeeEEEeCCcEEEEEccCCCChHHHHhhhcCCCCCCeeEEEEEEcCccC
Q 000997 816 SMAFGNINYFVDVPVELKQEGVLEDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPK 895 (1194)
Q Consensus 816 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 895 (1194)
.+.++|+++.+ +++.+|+|+|++|++||++||+||||||||||+++|+|... +.+|+|.++|.+.
T Consensus 12 ~l~i~~l~~~~-------------~~~~il~~isl~i~~Ge~~~I~G~NGsGKSTLlk~l~Gl~~--p~~G~i~~~g~~~ 76 (257)
T PRK11247 12 PLLLNAVSKRY-------------GERTVLNQLDLHIPAGQFVAVVGRSGCGKSTLLRLLAGLET--PSAGELLAGTAPL 76 (257)
T ss_pred cEEEEEEEEEE-------------CCcceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCeEEEECCEEH
Confidence 35667776554 23569999999999999999999999999999999999876 4689999999765
Q ss_pred ChhcccceeeEeecCCCCCCCCcHHHHHHHHhhhcCCCcCcHHHHHHHHHHHHHHcCCCcccCCcccCCCCCCCCHHHHH
Q 000997 896 RQETFARISGYCEQNDIHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRK 975 (1194)
Q Consensus 896 ~~~~~~~~~gyv~Q~~~~~~~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrq 975 (1194)
. ..++.++|++|++.+++.+||+||+.+... . .....+.++++.+++.+..+.. +..|||||||
T Consensus 77 ~--~~~~~i~~v~q~~~l~~~~tv~enl~~~~~-----~----~~~~~~~~~l~~~gl~~~~~~~-----~~~LSgGqkq 140 (257)
T PRK11247 77 A--EAREDTRLMFQDARLLPWKKVIDNVGLGLK-----G----QWRDAALQALAAVGLADRANEW-----PAALSGGQKQ 140 (257)
T ss_pred H--HhhCceEEEecCccCCCCCcHHHHHHhccc-----c----hHHHHHHHHHHHcCChhHhcCC-----hhhCCHHHHH
Confidence 3 345679999999988888999999987421 0 1134577889999998766654 3589999999
Q ss_pred HHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCCcHHHHHhcCeEEEEccCcEEEEeCCC
Q 000997 976 RLTIAVELVANPSIVFMDEPTSGLDARAAAIVMRTVRNIVN-TGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1194)
Q Consensus 976 rl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~l~~-~g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~ 1054 (1194)
|++||++|+.+|++|+|||||+|||+.++..+.+.|+++.+ .|.|||+++|+++ .+...+|++++|.+ |++++.|+.
T Consensus 141 rl~laraL~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~~~tviivsHd~~-~~~~~~d~i~~l~~-G~i~~~~~~ 218 (257)
T PRK11247 141 RVALARALIHRPGLLLLDEPLGALDALTRIEMQDLIESLWQQHGFTVLLVTHDVS-EAVAMADRVLLIEE-GKIGLDLTV 218 (257)
T ss_pred HHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEeeccc
Confidence 99999999999999999999999999999999999999865 5899999999986 46678999999984 788887764
No 178
>PRK13631 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.8e-36 Score=342.72 Aligned_cols=218 Identities=22% Similarity=0.317 Sum_probs=177.4
Q ss_pred eeEeecceeeeecccccccccccccceEEeeeeeEEEeCCcEEEEEccCCCChHHHHhhhcCCCCCCeeEEEEEEcCccC
Q 000997 816 SMAFGNINYFVDVPVELKQEGVLEDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPK 895 (1194)
Q Consensus 816 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 895 (1194)
.+.++|+++.++.. ......+|+|||++|++||++||+|+||||||||+++|+|..+ +.+|+|.++|.++
T Consensus 21 ~l~~~nl~~~y~~~--------~~~~~~~L~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~L~Gl~~--p~~G~I~i~g~~~ 90 (320)
T PRK13631 21 ILRVKNLYCVFDEK--------QENELVALNNISYTFEKNKIYFIIGNSGSGKSTLVTHFNGLIK--SKYGTIQVGDIYI 90 (320)
T ss_pred eEEEEeEEEEeCCC--------CcccccceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCCeEEECCEEc
Confidence 46777877765310 0012469999999999999999999999999999999999876 4689999999765
Q ss_pred Ch-------------------hcccceeeEeecCC--CCCCCCcHHHHHHHHhhhcCCCcCcHHHHHHHHHHHHHHcCCC
Q 000997 896 RQ-------------------ETFARISGYCEQND--IHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELT 954 (1194)
Q Consensus 896 ~~-------------------~~~~~~~gyv~Q~~--~~~~~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~ 954 (1194)
.. ..+++.+|||+|++ .+++ .||+||+.|+.... ....++..+++.++++.+++.
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~v~Q~~~~~l~~-~tv~eni~~~~~~~---~~~~~~~~~~~~~~l~~~gL~ 166 (320)
T PRK13631 91 GDKKNNHELITNPYSKKIKNFKELRRRVSMVFQFPEYQLFK-DTIEKDIMFGPVAL---GVKKSEAKKLAKFYLNKMGLD 166 (320)
T ss_pred ccccccccccccccccccchHHHHHhcEEEEEECchhcccc-chHHHHHHhhHHhc---CCCHHHHHHHHHHHHHHcCCC
Confidence 32 23467899999986 3554 59999998864322 223344455678899999996
Q ss_pred -cccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHH
Q 000997 955 -SLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIF 1033 (1194)
Q Consensus 955 -~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~ 1033 (1194)
+..+.. +.+|||||||||+|||+|+.+|+||+|||||+|||+.++..+++.|+++.++|+|||++||+++ .+.
T Consensus 167 ~~~~~~~-----~~~LSgGqkqRvaiAraL~~~p~iLLLDEPtsgLD~~~~~~l~~~L~~l~~~g~TiiivtHd~~-~~~ 240 (320)
T PRK13631 167 DSYLERS-----PFGLSGGQKRRVAIAGILAIQPEILIFDEPTAGLDPKGEHEMMQLILDAKANNKTVFVITHTME-HVL 240 (320)
T ss_pred hhHhcCC-----cccCCHHHHHHHHHHHHHHcCCCEEEEECCccCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHH-HHH
Confidence 455543 3589999999999999999999999999999999999999999999999877999999999976 466
Q ss_pred HhcCeEEEEccCcEEEEeCCC
Q 000997 1034 ESFDELLFMKRGGELIYAGPL 1054 (1194)
Q Consensus 1034 ~~~d~~~~l~~gG~~~~~g~~ 1054 (1194)
+.+|++++|++ |+++..|+.
T Consensus 241 ~~adri~vl~~-G~i~~~g~~ 260 (320)
T PRK13631 241 EVADEVIVMDK-GKILKTGTP 260 (320)
T ss_pred HhCCEEEEEEC-CEEEEeCCH
Confidence 78999999984 799999975
No 179
>TIGR00972 3a0107s01c2 phosphate ABC transporter, ATP-binding protein. This model represents the ATP-binding protein of a family of ABC transporters for inorganic phosphate. In the model species Escherichia coli, a constitutive transporter for inorganic phosphate, with low affinity, is also present. The high affinity transporter that includes this polypeptide is induced when extracellular phosphate concentrations are low. The proteins most similar to the members of this family but not included appear to be amino acid transporters.
Probab=100.00 E-value=5.2e-36 Score=332.66 Aligned_cols=203 Identities=27% Similarity=0.343 Sum_probs=169.1
Q ss_pred ceEEeeeeeEEEeCCcEEEEEccCCCChHHHHhhhcCCCCCC---eeEEEEEEcCccCCh-----hcccceeeEeecCCC
Q 000997 841 RLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGG---IIEGDIYISGYPKRQ-----ETFARISGYCEQNDI 912 (1194)
Q Consensus 841 ~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~---~~~G~i~i~g~~~~~-----~~~~~~~gyv~Q~~~ 912 (1194)
+..+|+|+|+++++||++||+|+||||||||+++|+|..++. +.+|+|.++|.++.. ...++.++|++|++.
T Consensus 13 ~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~v~q~~~ 92 (247)
T TIGR00972 13 EKEALKNINLDIPKNQVTALIGPSGCGKSTLLRSLNRMNDLVPGVRIEGKVLFDGQDIYDKKIDVVELRRRVGMVFQKPN 92 (247)
T ss_pred CeeeecceeEEECCCCEEEEECCCCCCHHHHHHHHhccCCCCcCCCCceEEEECCEEccccccchHHHHhheEEEecCcc
Confidence 356999999999999999999999999999999999986521 128999999987642 234567999999988
Q ss_pred CCCCCcHHHHHHHHhhhcCCCcCcHHHHHHHHHHHHHHcCCC----cccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCC
Q 000997 913 HSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELT----SLSGALIGLPGINGLSTEQRKRLTIAVELVANPS 988 (1194)
Q Consensus 913 ~~~~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~----~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~ 988 (1194)
+++ .|++||+.+....+. .....+..+.++++++.+++. +..+.. +..||||||||++|||+|+.+|+
T Consensus 93 ~~~-~tv~e~l~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~-----~~~LSgG~~qrv~laral~~~p~ 164 (247)
T TIGR00972 93 PFP-MSIYDNIAYGPRLHG--IKDKKELDEIVEESLKKAALWDEVKDRLHDS-----ALGLSGGQQQRLCIARALAVEPE 164 (247)
T ss_pred cCC-CCHHHHHHhHHHhcC--CCCHHHHHHHHHHHHHHcCCCcchhhHhhCC-----cccCCHHHHHHHHHHHHHhcCCC
Confidence 888 999999998654331 112334445678899999997 444432 35899999999999999999999
Q ss_pred EEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCeEEEEccCcEEEEeCCC
Q 000997 989 IVFMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1194)
Q Consensus 989 illLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~ 1054 (1194)
+|+|||||+|||+.++..+++.|+++++ ++|||+++|+++ ++.+.+|++++|++ |++++.|+.
T Consensus 165 llllDEPt~~LD~~~~~~l~~~l~~~~~-~~tiiivsH~~~-~~~~~~d~i~~l~~-G~i~~~~~~ 227 (247)
T TIGR00972 165 VLLLDEPTSALDPIATGKIEELIQELKK-KYTIVIVTHNMQ-QAARISDRTAFFYD-GELVEYGPT 227 (247)
T ss_pred EEEEeCCcccCCHHHHHHHHHHHHHHHh-cCeEEEEecCHH-HHHHhCCEEEEEEC-CEEEEeCCH
Confidence 9999999999999999999999999876 489999999986 46678999999985 789988875
No 180
>PRK13650 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.8e-36 Score=338.05 Aligned_cols=200 Identities=25% Similarity=0.328 Sum_probs=171.5
Q ss_pred eEEeeeeeEEEeCCcEEEEEccCCCChHHHHhhhcCCCCCCeeEEEEEEcCccCCh---hcccceeeEeecCCC-CCCCC
Q 000997 842 LQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ---ETFARISGYCEQNDI-HSPGL 917 (1194)
Q Consensus 842 ~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~---~~~~~~~gyv~Q~~~-~~~~l 917 (1194)
+.+|+|||++|++||++||+|+||||||||+++|+|..+ +.+|+|.++|.++.. ...++.+|||+|++. .++..
T Consensus 20 ~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~i~~~~~~~~~~~i~~v~q~~~~~~~~~ 97 (279)
T PRK13650 20 KYTLNDVSFHVKQGEWLSIIGHNGSGKSTTVRLIDGLLE--AESGQIIIDGDLLTEENVWDIRHKIGMVFQNPDNQFVGA 97 (279)
T ss_pred CeeeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCcEEEECCEECCcCcHHHHHhhceEEEcChHHhcccc
Confidence 459999999999999999999999999999999999876 468999999987642 234567999999974 66778
Q ss_pred cHHHHHHHHhhhcCCCcCcHHHHHHHHHHHHHHcCCCcccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCC
Q 000997 918 TVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTS 997 (1194)
Q Consensus 918 Tv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEPTs 997 (1194)
||+||+.|+.... ....++..+.++++++.++|.+..+..+ ..||||||||++||+||+.+|+||+|||||+
T Consensus 98 tv~eni~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----~~LSgGq~qrv~lAral~~~p~lLlLDEPt~ 169 (279)
T PRK13650 98 TVEDDVAFGLENK---GIPHEEMKERVNEALELVGMQDFKEREP-----ARLSGGQKQRVAIAGAVAMRPKIIILDEATS 169 (279)
T ss_pred cHHHHHHhhHHhC---CCCHHHHHHHHHHHHHHCCCHhHhhCCc-----ccCCHHHHHHHHHHHHHHcCCCEEEEECCcc
Confidence 9999999875432 2334445567889999999987776653 5899999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCeEEEEccCcEEEEeCCC
Q 000997 998 GLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1194)
Q Consensus 998 gLD~~~~~~i~~~l~~l~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~ 1054 (1194)
|||+.++..+++.|++++++ |+|||++||+++ .+ ..+|++++|. +|+++..|+.
T Consensus 170 ~LD~~~~~~l~~~l~~l~~~~g~tilivtH~~~-~~-~~~dri~~l~-~G~i~~~g~~ 224 (279)
T PRK13650 170 MLDPEGRLELIKTIKGIRDDYQMTVISITHDLD-EV-ALSDRVLVMK-NGQVESTSTP 224 (279)
T ss_pred cCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHH-HH-HhCCEEEEEE-CCEEEEECCH
Confidence 99999999999999999875 999999999976 34 5799999998 5899988875
No 181
>cd03293 ABC_NrtD_SsuB_transporters NrtD and SsuB are the ATP-binding subunits of the bacterial ABC-type nitrate and sulfonate transport systems, respectively. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=9e-36 Score=324.93 Aligned_cols=200 Identities=30% Similarity=0.389 Sum_probs=168.7
Q ss_pred eeeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCceeeEEEECCccCCCCCCCceEEEEecCCCCCCCCCHH
Q 000997 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVPPRTSAYVSQQDWQVAEMTVR 227 (1194)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lTV~ 227 (1194)
.++|+|+|++|++|++++|+||||||||||+++|+|.+++. +|+|.++|.++.. .++.++|++|++.+++.+||+
T Consensus 17 ~~il~~vs~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~--~~~~i~~v~q~~~~~~~~tv~ 91 (220)
T cd03293 17 VTALEDISLSVEEGEFVALVGPSGCGKSTLLRIIAGLERPT---SGEVLVDGEPVTG--PGPDRGYVFQQDALLPWLTVL 91 (220)
T ss_pred eEEEeceeEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEECcc--ccCcEEEEecccccccCCCHH
Confidence 46999999999999999999999999999999999998775 9999999987753 346799999999888889999
Q ss_pred HHHHHhhhccCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhccCcchhHHHHHHHHHhCCcccccccccCccCCCC
Q 000997 228 ETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEMLKGI 307 (1194)
Q Consensus 228 E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~k~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~L 307 (1194)
||+.++....+... ......++.+++.+||.+..+..+ ..|
T Consensus 92 e~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~-----~~L 132 (220)
T cd03293 92 DNVALGLELQGVPK----------------------------------AEARERAEELLELVGLSGFENAYP-----HQL 132 (220)
T ss_pred HHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCChhhhhCCc-----ccC
Confidence 99988643321100 001123678899999987766655 469
Q ss_pred ChhhhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEc--CCe
Q 000997 308 SGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLS--EGQ 385 (1194)
Q Consensus 308 SGGqkqRvsia~al~~~~~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~--~G~ 385 (1194)
||||||||+||+||+.+|++++|||||+|||+.++..+++.|+++.+.. +++|+.++|..+++.+++|++++|+ +|+
T Consensus 133 SgG~~qrl~la~al~~~p~lllLDEPt~~LD~~~~~~~~~~l~~~~~~~-~~tiii~sH~~~~~~~~~d~i~~l~~~~G~ 211 (220)
T cd03293 133 SGGMRQRVALARALAVDPDVLLLDEPFSALDALTREQLQEELLDIWRET-GKTVLLVTHDIDEAVFLADRVVVLSARPGR 211 (220)
T ss_pred CHHHHHHHHHHHHHHcCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHc-CCEEEEEecCHHHHHHhCCEEEEEECCCCE
Confidence 9999999999999999999999999999999999999999999886533 4456667888888999999999999 799
Q ss_pred EEEecCh
Q 000997 386 IVYQGPR 392 (1194)
Q Consensus 386 iv~~G~~ 392 (1194)
++..++.
T Consensus 212 i~~~~~~ 218 (220)
T cd03293 212 IVAEVEV 218 (220)
T ss_pred EEEEEEe
Confidence 9988865
No 182
>PRK13636 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=7.4e-36 Score=337.24 Aligned_cols=216 Identities=26% Similarity=0.358 Sum_probs=178.3
Q ss_pred eeEeecceeeeecccccccccccccceEEeeeeeEEEeCCcEEEEEccCCCChHHHHhhhcCCCCCCeeEEEEEEcCccC
Q 000997 816 SMAFGNINYFVDVPVELKQEGVLEDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPK 895 (1194)
Q Consensus 816 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 895 (1194)
-+.++|+++.++ +++.+|+|||++|++||++||+|+||||||||+++|+|..+ +.+|+|.++|.++
T Consensus 5 ~l~~~~l~~~~~------------~~~~~l~~vs~~i~~Ge~~~i~G~nGaGKSTLl~~i~Gl~~--p~~G~i~i~g~~~ 70 (283)
T PRK13636 5 ILKVEELNYNYS------------DGTHALKGININIKKGEVTAILGGNGAGKSTLFQNLNGILK--PSSGRILFDGKPI 70 (283)
T ss_pred eEEEEeEEEEeC------------CCCeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCccEEEECCEEC
Confidence 356667665541 13469999999999999999999999999999999999876 4689999999876
Q ss_pred C-----hhcccceeeEeecCCC-CCCCCcHHHHHHHHhhhcCCCcCcHHHHHHHHHHHHHHcCCCcccCCcccCCCCCCC
Q 000997 896 R-----QETFARISGYCEQNDI-HSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGL 969 (1194)
Q Consensus 896 ~-----~~~~~~~~gyv~Q~~~-~~~~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~L 969 (1194)
. ...+++.+||++|++. .+...|++||+.+..... ..+..+..+.++++++.++|.+..+.. +..|
T Consensus 71 ~~~~~~~~~~~~~ig~v~q~~~~~~~~~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~-----~~~L 142 (283)
T PRK13636 71 DYSRKGLMKLRESVGMVFQDPDNQLFSASVYQDVSFGAVNL---KLPEDEVRKRVDNALKRTGIEHLKDKP-----THCL 142 (283)
T ss_pred CCCcchHHHHHhhEEEEecCcchhhccccHHHHHHhHHHHc---CCCHHHHHHHHHHHHHHCCChhhhhCC-----cccC
Confidence 3 1235678999999874 234579999998864322 223344456788999999998777664 3589
Q ss_pred CHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCeEEEEccCcEE
Q 000997 970 STEQRKRLTIAVELVANPSIVFMDEPTSGLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGEL 1048 (1194)
Q Consensus 970 SgGqrqrl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~l~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~ 1048 (1194)
|||||||++|||||+.+|+||+|||||+|||+.++..+++.|++++++ |+|||+++|+++ ++...||++++|++ |++
T Consensus 143 S~G~~qrl~laraL~~~p~lLilDEPt~gLD~~~~~~l~~~l~~l~~~~g~tillvsH~~~-~~~~~~dri~~l~~-G~i 220 (283)
T PRK13636 143 SFGQKKRVAIAGVLVMEPKVLVLDEPTAGLDPMGVSEIMKLLVEMQKELGLTIIIATHDID-IVPLYCDNVFVMKE-GRV 220 (283)
T ss_pred CHHHHHHHHHHHHHHcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEecCHH-HHHHhCCEEEEEEC-CEE
Confidence 999999999999999999999999999999999999999999999865 999999999976 46668999999985 799
Q ss_pred EEeCCCC
Q 000997 1049 IYAGPLG 1055 (1194)
Q Consensus 1049 ~~~g~~~ 1055 (1194)
++.|+..
T Consensus 221 ~~~g~~~ 227 (283)
T PRK13636 221 ILQGNPK 227 (283)
T ss_pred EEeCCHH
Confidence 9999863
No 183
>cd03259 ABC_Carb_Solutes_like ABC Carbohydrate and Solute Transporters-like subgroup. This family is comprised of proteins involved in the transport of apparently unrelated solutes and proteins specific for di- and oligosaccharides and polyols. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.9e-36 Score=326.15 Aligned_cols=200 Identities=31% Similarity=0.429 Sum_probs=167.8
Q ss_pred eeeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCceeeEEEECCccCCCCC-CCceEEEEecCCCCCCCCCH
Q 000997 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV-PPRTSAYVSQQDWQVAEMTV 226 (1194)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~~-~~~~~~yv~Q~d~~~~~lTV 226 (1194)
+++|+|+|+++++|++++|+||||||||||+++|+|.++|. +|+|.++|.++.... .++.++|++|++.+++.+||
T Consensus 13 ~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~---~G~i~~~g~~~~~~~~~~~~i~~v~q~~~~~~~~tv 89 (213)
T cd03259 13 VRALDDLSLTVEPGEFLALLGPSGCGKTTLLRLIAGLERPD---SGEILIDGRDVTGVPPERRNIGMVFQDYALFPHLTV 89 (213)
T ss_pred eeeecceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---CeEEEECCEEcCcCchhhccEEEEcCchhhccCCcH
Confidence 46999999999999999999999999999999999998776 999999998875432 24579999999988999999
Q ss_pred HHHHHHhhhccCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhccCcchhHHHHHHHHHhCCcccccccccCccCCC
Q 000997 227 RETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEMLKG 306 (1194)
Q Consensus 227 ~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~k~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~ 306 (1194)
+||+.++....+.. . ......++.+++.+||++..++.++ .
T Consensus 90 ~~~l~~~~~~~~~~--~--------------------------------~~~~~~~~~~l~~~~l~~~~~~~~~-----~ 130 (213)
T cd03259 90 AENIAFGLKLRGVP--K--------------------------------AEIRARVRELLELVGLEGLLNRYPH-----E 130 (213)
T ss_pred HHHHHhHHHHcCCC--H--------------------------------HHHHHHHHHHHHHcCChhhhhcChh-----h
Confidence 99998764321100 0 0011236778899999877776654 5
Q ss_pred CChhhhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEcCCeE
Q 000997 307 ISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEGQI 386 (1194)
Q Consensus 307 LSGGqkqRvsia~al~~~~~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~~G~i 386 (1194)
|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++++.. +++|+.++|+.+++.+++|+|++|++|++
T Consensus 131 LSgG~~qrl~la~al~~~p~~lllDEPt~~LD~~~~~~l~~~l~~~~~~~-~~tii~~sH~~~~~~~~~d~v~~l~~G~i 209 (213)
T cd03259 131 LSGGQQQRVALARALAREPSLLLLDEPLSALDAKLREELREELKELQREL-GITTIYVTHDQEEALALADRIAVMNEGRI 209 (213)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHc-CCEEEEEecCHHHHHHhcCEEEEEECCEE
Confidence 99999999999999999999999999999999999999999999987533 45566688888999999999999999999
Q ss_pred EEec
Q 000997 387 VYQG 390 (1194)
Q Consensus 387 v~~G 390 (1194)
++.|
T Consensus 210 ~~~g 213 (213)
T cd03259 210 VQVG 213 (213)
T ss_pred EecC
Confidence 8765
No 184
>cd03265 ABC_DrrA DrrA is the ATP-binding protein component of a bacterial exporter complex that confers resistance to the antibiotics daunorubicin and doxorubicin. In addition to DrrA, the complex includes an integral membrane protein called DrrB. DrrA belongs to the ABC family of transporters and shares sequence and functional similarities with a protein found in cancer cells called P-glycoprotein. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=4.1e-36 Score=327.67 Aligned_cols=205 Identities=29% Similarity=0.376 Sum_probs=172.4
Q ss_pred eeeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCceeeEEEECCccCCCC--CCCceEEEEecCCCCCCCCC
Q 000997 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEF--VPPRTSAYVSQQDWQVAEMT 225 (1194)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~--~~~~~~~yv~Q~d~~~~~lT 225 (1194)
+++|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++... ..++.++|++|++.+++.+|
T Consensus 13 ~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~---~G~i~~~g~~~~~~~~~~~~~i~~~~q~~~~~~~~t 89 (220)
T cd03265 13 FEAVRGVSFRVRRGEIFGLLGPNGAGKTTTIKMLTTLLKPT---SGRATVAGHDVVREPREVRRRIGIVFQDLSVDDELT 89 (220)
T ss_pred EEeeeceeEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEecCcChHHHhhcEEEecCCccccccCc
Confidence 46999999999999999999999999999999999998776 99999999876432 12357999999998899999
Q ss_pred HHHHHHHhhhccCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhccCcchhHHHHHHHHHhCCcccccccccCccCC
Q 000997 226 VRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEMLK 305 (1194)
Q Consensus 226 V~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~k~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~ 305 (1194)
|+||+.+.....+... .+....++.+++.+||++..++.++
T Consensus 90 v~~~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~~----- 130 (220)
T cd03265 90 GWENLYIHARLYGVPG----------------------------------AERRERIDELLDFVGLLEAADRLVK----- 130 (220)
T ss_pred HHHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCCHHHhhCChh-----
Confidence 9999988643321100 0012246788999999887777664
Q ss_pred CCChhhhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEcCCe
Q 000997 306 GISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEGQ 385 (1194)
Q Consensus 306 ~LSGGqkqRvsia~al~~~~~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~~G~ 385 (1194)
.|||||||||+||+|++.+|++++|||||+|||+.++..+.+.|+++.+.. +++|+.++|+.+++.+++|++++|.+|+
T Consensus 131 ~LS~G~~qr~~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~-~~tvi~~tH~~~~~~~~~d~i~~l~~G~ 209 (220)
T cd03265 131 TYSGGMRRRLEIARSLVHRPEVLFLDEPTIGLDPQTRAHVWEYIEKLKEEF-GMTILLTTHYMEEAEQLCDRVAIIDHGR 209 (220)
T ss_pred hCCHHHHHHHHHHHHHhcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHHhc-CCEEEEEeCCHHHHHHhCCEEEEEeCCE
Confidence 599999999999999999999999999999999999999999999987543 4556668899999999999999999999
Q ss_pred EEEecChhhH
Q 000997 386 IVYQGPRVSV 395 (1194)
Q Consensus 386 iv~~G~~~~~ 395 (1194)
++..|+++++
T Consensus 210 i~~~~~~~~~ 219 (220)
T cd03265 210 IIAEGTPEEL 219 (220)
T ss_pred EEEeCChHHc
Confidence 9999887653
No 185
>TIGR02211 LolD_lipo_ex lipoprotein releasing system, ATP-binding protein. This model represents LolD, a member of the ABC transporter family (pfam00005). LolD is involved in localization of lipoproteins in some bacteria. It works with a transmembrane protein LolC, which in some species is a paralogous pair LolC and LolE. Depending on whether the residue immediately following the new, modified N-terminal Cys residue, the nascent lipoprotein may be carried further by LolA and LolB to the outer membrane, or remain at the inner membrane. The top scoring proteins excluded by this model include homologs from the archaeal genus Methanosarcina.
Probab=100.00 E-value=5.8e-36 Score=326.85 Aligned_cols=195 Identities=27% Similarity=0.397 Sum_probs=163.6
Q ss_pred eEEeeeeeEEEeCCcEEEEEccCCCChHHHHhhhcCCCCCCeeEEEEEEcCccCChh---c---cc-ceeeEeecCCCCC
Q 000997 842 LQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQE---T---FA-RISGYCEQNDIHS 914 (1194)
Q Consensus 842 ~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~---~---~~-~~~gyv~Q~~~~~ 914 (1194)
+.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++... . ++ +.++|++|++.++
T Consensus 18 ~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~i~G~~~--~~~G~i~~~g~~~~~~~~~~~~~~~~~~i~~v~q~~~~~ 95 (221)
T TIGR02211 18 TRVLKGVSLSIGKGEIVAIVGSSGSGKSTLLHLLGGLDN--PTSGEVLFNGQSLSKLSSNERAKLRNKKLGFIYQFHHLL 95 (221)
T ss_pred eEeEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEEhhhcCHhHHHHHHHhcEEEEecccccC
Confidence 579999999999999999999999999999999999876 4689999999875321 1 22 5699999999888
Q ss_pred CCCcHHHHHHHHhhhcCCCcCcHHHHHHHHHHHHHHcCCCcccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeC
Q 000997 915 PGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDE 994 (1194)
Q Consensus 915 ~~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illLDE 994 (1194)
+.+|++||+.+....+. ....+..+.+.++++.+++.+..+..+ ..||||||||++|||+|+.+|+||+|||
T Consensus 96 ~~~tv~~~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrv~laral~~~p~illlDE 167 (221)
T TIGR02211 96 PDFTALENVAMPLLIGK---KSVKEAKERAYEMLEKVGLEHRINHRP-----SELSGGERQRVAIARALVNQPSLVLADE 167 (221)
T ss_pred CCCcHHHHHHHHHHhcC---CCHHHHHHHHHHHHHHcCChhhhhCCh-----hhCCHHHHHHHHHHHHHhCCCCEEEEeC
Confidence 89999999988654331 122333456788999999977666543 5799999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCeEEEEccCcEEE
Q 000997 995 PTSGLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELI 1049 (1194)
Q Consensus 995 PTsgLD~~~~~~i~~~l~~l~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~ 1049 (1194)
||+|||+.++..+.+.|++++++ |+|||++||+++ .+ +.+|++++|++ |+++
T Consensus 168 Pt~~LD~~~~~~l~~~l~~~~~~~~~tii~~tH~~~-~~-~~~d~v~~l~~-G~i~ 220 (221)
T TIGR02211 168 PTGNLDNNNAKIIFDLMLELNRELNTSFLVVTHDLE-LA-KKLDRVLEMKD-GQLF 220 (221)
T ss_pred CCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HH-hhcCEEEEEeC-CEec
Confidence 99999999999999999999764 899999999976 34 55899999985 6654
No 186
>PRK11300 livG leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.4e-36 Score=335.06 Aligned_cols=207 Identities=23% Similarity=0.257 Sum_probs=170.9
Q ss_pred cceEEeeeeeEEEeCCcEEEEEccCCCChHHHHhhhcCCCCCCeeEEEEEEcCccCChh---c-ccceeeEeecCCCCCC
Q 000997 840 DRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQE---T-FARISGYCEQNDIHSP 915 (1194)
Q Consensus 840 ~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~---~-~~~~~gyv~Q~~~~~~ 915 (1194)
+++.+|+|+|+++++|+++||+||||||||||+++|+|..+ +.+|+|.++|.++... . .+..++|++|++.+++
T Consensus 16 ~~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~ 93 (255)
T PRK11300 16 GGLLAVNNVNLEVREQEIVSLIGPNGAGKTTVFNCLTGFYK--PTGGTILLRGQHIEGLPGHQIARMGVVRTFQHVRLFR 93 (255)
T ss_pred CCEEEEEeeeeEEcCCeEEEEECCCCCCHHHHHHHHhCCcC--CCcceEEECCEECCCCCHHHHHhcCeEEeccCcccCC
Confidence 34679999999999999999999999999999999999876 4689999999876421 1 2345899999999999
Q ss_pred CCcHHHHHHHHhhhcCC----------C--cCcHHHHHHHHHHHHHHcCCCcccCCcccCCCCCCCCHHHHHHHHHHHHH
Q 000997 916 GLTVLESLLFSAWLRLP----------S--EIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVEL 983 (1194)
Q Consensus 916 ~lTv~e~l~f~~~lr~~----------~--~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL 983 (1194)
.+|++||+.+....... . .....+..+.++++++.+++.+..+..+ ..||||||||++||++|
T Consensus 94 ~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~-----~~LS~G~~qrv~la~al 168 (255)
T PRK11300 94 EMTVIENLLVAQHQQLKTGLFSGLLKTPAFRRAESEALDRAATWLERVGLLEHANRQA-----GNLAYGQQRRLEIARCM 168 (255)
T ss_pred CCcHHHHHHHhhhccccchhhhhhccccccccchhHHHHHHHHHHHhCChhhhhhCCh-----hhCCHHHHHHHHHHHHH
Confidence 99999999986431110 0 0011123346778889999877666543 58999999999999999
Q ss_pred hhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCeEEEEccCcEEEEeCCCC
Q 000997 984 VANPSIVFMDEPTSGLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLG 1055 (1194)
Q Consensus 984 ~~~p~illLDEPTsgLD~~~~~~i~~~l~~l~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~~ 1055 (1194)
+.+|++|+|||||+|||+.++..+.+.|++++++ |+|||+++|+++ ++.+.||++++|+ +|++++.|+..
T Consensus 169 ~~~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~~~~tii~~sH~~~-~~~~~~d~i~~l~-~g~i~~~~~~~ 239 (255)
T PRK11300 169 VTQPEILMLDEPAAGLNPKETKELDELIAELRNEHNVTVLLIEHDMK-LVMGISDRIYVVN-QGTPLANGTPE 239 (255)
T ss_pred hcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHhhcCCEEEEEeCCHH-HHHHhCCEEEEEE-CCeEEecCCHH
Confidence 9999999999999999999999999999999775 899999999976 5668899999998 57899988753
No 187
>KOG0058 consensus Peptide exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=5.4e-37 Score=361.58 Aligned_cols=215 Identities=26% Similarity=0.430 Sum_probs=179.0
Q ss_pred ceeEeecceeeeecccccccccccccceEEeeeeeEEEeCCcEEEEEccCCCChHHHHhhhcCCCCCCeeEEEEEEcCcc
Q 000997 815 LSMAFGNINYFVDVPVELKQEGVLEDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYP 894 (1194)
Q Consensus 815 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~ 894 (1194)
-.+.|+|+++.++.. ++.++|+|+||+++|||.+|||||||+||||+.++|-.... |.+|+|.+||+|
T Consensus 464 G~IeF~~VsFaYP~R----------p~~~Vlk~lsfti~pGe~vALVGPSGsGKSTiasLL~rfY~--PtsG~IllDG~~ 531 (716)
T KOG0058|consen 464 GVIEFEDVSFAYPTR----------PDVPVLKNLSFTIRPGEVVALVGPSGSGKSTIASLLLRFYD--PTSGRILLDGVP 531 (716)
T ss_pred ceEEEEEeeeecCCC----------CCchhhcCceeeeCCCCEEEEECCCCCCHHHHHHHHHHhcC--CCCCeEEECCee
Confidence 468999999988643 45689999999999999999999999999999999998766 679999999999
Q ss_pred CCh---hcccceeeEeecCCCCCCCCcHHHHHHHHhhhcCCCcCcHHHHH-----HHHHHHHHHcCCCcccCCcccCCCC
Q 000997 895 KRQ---ETFARISGYCEQNDIHSPGLTVLESLLFSAWLRLPSEIELETQR-----AFVEEVMELVELTSLSGALIGLPGI 966 (1194)
Q Consensus 895 ~~~---~~~~~~~gyv~Q~~~~~~~lTv~e~l~f~~~lr~~~~~~~~~~~-----~~v~~~l~~l~l~~~~~~~~~~~~~ 966 (1194)
+.+ ..+++.+|+|.|+|.+|.. |++||+.|+.. ..+.++.. +.+.+.+ .++.+-.|+.+|..|
T Consensus 532 i~~~~~~~lr~~Ig~V~QEPvLFs~-sI~eNI~YG~~-----~~t~e~i~~AAk~ANah~FI--~~~p~gY~T~VGEkG- 602 (716)
T KOG0058|consen 532 ISDINHKYLRRKIGLVGQEPVLFSG-SIRENIAYGLD-----NATDEEIEAAAKMANAHEFI--TNFPDGYNTVVGEKG- 602 (716)
T ss_pred hhhcCHHHHHHHeeeeeccceeecc-cHHHHHhcCCC-----CCCHHHHHHHHHHhChHHHH--HhCccccccccCCcc-
Confidence 754 5578899999999999965 99999999753 22222221 1122222 244555778888665
Q ss_pred CCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCeEEEEccCc
Q 000997 967 NGLSTEQRKRLTIAVELVANPSIVFMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGG 1046 (1194)
Q Consensus 967 ~~LSgGqrqrl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gG 1046 (1194)
..||||||||++|||||++||.||||||+||+||+++...|.++|.++.+ ++|||+|+|+.+ ..+.+|+|+++++ |
T Consensus 603 ~qLSGGQKQRIAIARALlr~P~VLILDEATSALDaeSE~lVq~aL~~~~~-~rTVlvIAHRLS--TV~~Ad~Ivvi~~-G 678 (716)
T KOG0058|consen 603 SQLSGGQKQRIAIARALLRNPRVLILDEATSALDAESEYLVQEALDRLMQ-GRTVLVIAHRLS--TVRHADQIVVIDK-G 678 (716)
T ss_pred ccccchHHHHHHHHHHHhcCCCEEEEechhhhcchhhHHHHHHHHHHhhc-CCeEEEEehhhh--HhhhccEEEEEcC-C
Confidence 47999999999999999999999999999999999999999999998764 699999999965 6788999999985 8
Q ss_pred EEEEeCCC
Q 000997 1047 ELIYAGPL 1054 (1194)
Q Consensus 1047 ~~~~~g~~ 1054 (1194)
+++..|.-
T Consensus 679 ~V~E~G~h 686 (716)
T KOG0058|consen 679 RVVEMGTH 686 (716)
T ss_pred eEEecccH
Confidence 99998853
No 188
>TIGR03005 ectoine_ehuA ectoine/hydroxyectoine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of a conserved four gene ABC transporter operon found next to ectoine unilization operons and ectoine biosynthesis operons. Ectoine is a compatible solute that protects enzymes from high osmolarity. It is released by some species in response to hypoosmotic shock, and it is taken up by a number of bacteria as a compatible solute or for consumption. This family shows strong sequence similiarity to a number of amino acid ABC transporter ATP-binding proteins.
Probab=100.00 E-value=8.8e-36 Score=331.84 Aligned_cols=203 Identities=25% Similarity=0.322 Sum_probs=171.6
Q ss_pred ceEEeeeeeEEEeCCcEEEEEccCCCChHHHHhhhcCCCCCCeeEEEEEEcCccCCh----------------hccccee
Q 000997 841 RLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ----------------ETFARIS 904 (1194)
Q Consensus 841 ~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~----------------~~~~~~~ 904 (1194)
++.+|+||||++++||++||+||||||||||+++|+|... +.+|+|.++|.++.. ..+++.+
T Consensus 12 ~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~i 89 (252)
T TIGR03005 12 ILTVLDGLNFSVAAGEKVALIGPSGSGKSTILRILMTLEP--IDEGQIQVEGEQLYHMPGRNGPLVPADEKHLRQMRNKI 89 (252)
T ss_pred CeeEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEEccccccccccccccchhHHHHHhhCe
Confidence 3579999999999999999999999999999999999876 468999999986531 1345679
Q ss_pred eEeecCCCCCCCCcHHHHHHHHhhhcCCCcCcHHHHHHHHHHHHHHcCCCcccCCcccCCCCCCCCHHHHHHHHHHHHHh
Q 000997 905 GYCEQNDIHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELV 984 (1194)
Q Consensus 905 gyv~Q~~~~~~~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~ 984 (1194)
+|++|++.+++..|+.||+.+..... .........+.++++++.+++.+..+.. +..||||||||++||++|+
T Consensus 90 ~~v~q~~~~~~~~tv~~nl~~~~~~~--~~~~~~~~~~~~~~~l~~~gl~~~~~~~-----~~~LS~G~~qrv~laral~ 162 (252)
T TIGR03005 90 GMVFQSFNLFPHKTVLDNVTEAPVLV--LGMARAEAEKRAMELLDMVGLADKADHM-----PAQLSGGQQQRVAIARALA 162 (252)
T ss_pred EEEecCcccCCCCcHHHHHHHHHHHh--cCCCHHHHHHHHHHHHHHcCChhHhhcC-----hhhcCHHHHHHHHHHHHHH
Confidence 99999999999999999998753211 1122334445678899999998766654 3579999999999999999
Q ss_pred hCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCeEEEEccCcEEEEeCCC
Q 000997 985 ANPSIVFMDEPTSGLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1194)
Q Consensus 985 ~~p~illLDEPTsgLD~~~~~~i~~~l~~l~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~ 1054 (1194)
.+|++|+|||||+|||+.++..+.+.|++++++ |.|||++||+++ ++...+|++++|++ |++++.|+.
T Consensus 163 ~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tiiivsH~~~-~~~~~~d~i~~l~~-G~i~~~g~~ 231 (252)
T TIGR03005 163 MRPKVMLFDEVTSALDPELVGEVLNVIRRLASEHDLTMLLVTHEMG-FAREFADRVCFFDK-GRIVEQGKP 231 (252)
T ss_pred cCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHH-HHHHhcCEEEEEEC-CEEEEeCCH
Confidence 999999999999999999999999999999765 899999999986 46678999999984 789988874
No 189
>PRK13646 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.1e-36 Score=339.88 Aligned_cols=200 Identities=22% Similarity=0.344 Sum_probs=169.2
Q ss_pred eEEeeeeeEEEeCCcEEEEEccCCCChHHHHhhhcCCCCCCeeEEEEEEcCccCCh-------hcccceeeEeecCC--C
Q 000997 842 LQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ-------ETFARISGYCEQND--I 912 (1194)
Q Consensus 842 ~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~-------~~~~~~~gyv~Q~~--~ 912 (1194)
+.+|+|||++|++||++||+||||||||||+++|+|..+ +.+|+|.++|.++.. ..+++.+|||+|++ .
T Consensus 20 ~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~L~Gl~~--p~~G~i~~~g~~i~~~~~~~~~~~~~~~ig~v~q~~~~~ 97 (286)
T PRK13646 20 HQAIHDVNTEFEQGKYYAIVGQTGSGKSTLIQNINALLK--PTTGTVTVDDITITHKTKDKYIRPVRKRIGMVFQFPESQ 97 (286)
T ss_pred cCceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCcEEEECCEECccccccchHHHHHhheEEEecChHhc
Confidence 469999999999999999999999999999999999876 468999999987632 23567899999986 3
Q ss_pred CCCCCcHHHHHHHHhhhcCCCcCcHHHHHHHHHHHHHHcCCC-cccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCEEE
Q 000997 913 HSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELT-SLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVF 991 (1194)
Q Consensus 913 ~~~~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~-~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~ill 991 (1194)
+++ .||.||+.|..... .....+..+.++++++.++|. +..+.. +..||||||||++||++|+.+|+||+
T Consensus 98 l~~-~tv~e~i~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----~~~LSgGq~qrv~laraL~~~p~ill 168 (286)
T PRK13646 98 LFE-DTVEREIIFGPKNF---KMNLDEVKNYAHRLLMDLGFSRDVMSQS-----PFQMSGGQMRKIAIVSILAMNPDIIV 168 (286)
T ss_pred cch-hhHHHHHHhhHHHc---CCCHHHHHHHHHHHHHHcCCChhhhhCC-----cccCCHHHHHHHHHHHHHHhCCCEEE
Confidence 444 59999999875332 223344556788999999996 555543 36899999999999999999999999
Q ss_pred EeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCCcHHHHHhcCeEEEEccCcEEEEeCCC
Q 000997 992 MDEPTSGLDARAAAIVMRTVRNIVN-TGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1194)
Q Consensus 992 LDEPTsgLD~~~~~~i~~~l~~l~~-~g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~ 1054 (1194)
|||||+|||+.++..+.+.|+++.+ .|+|||++||+++ .+.+.+|++++|+ +|++++.|+.
T Consensus 169 lDEPt~~LD~~~~~~l~~~l~~l~~~~g~tvl~vtH~~~-~~~~~~dri~~l~-~G~i~~~g~~ 230 (286)
T PRK13646 169 LDEPTAGLDPQSKRQVMRLLKSLQTDENKTIILVSHDMN-EVARYADEVIVMK-EGSIVSQTSP 230 (286)
T ss_pred EECCcccCCHHHHHHHHHHHHHHHHhCCCEEEEEecCHH-HHHHhCCEEEEEE-CCEEEEECCH
Confidence 9999999999999999999999975 4999999999976 4667899999998 5799999875
No 190
>PRK13641 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.3e-36 Score=339.15 Aligned_cols=201 Identities=25% Similarity=0.319 Sum_probs=169.7
Q ss_pred eEEeeeeeEEEeCCcEEEEEccCCCChHHHHhhhcCCCCCCeeEEEEEEcCccCCh-------hcccceeeEeecCCC-C
Q 000997 842 LQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ-------ETFARISGYCEQNDI-H 913 (1194)
Q Consensus 842 ~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~-------~~~~~~~gyv~Q~~~-~ 913 (1194)
+.+|+|||+++++||++||+||||||||||+++|+|..+ +.+|+|.++|.++.. ...++.+||++|++. .
T Consensus 20 ~~~l~~vsl~i~~Ge~~~iiG~NGaGKSTLl~~l~Gl~~--p~~G~i~~~g~~~~~~~~~~~~~~~~~~ig~v~q~~~~~ 97 (287)
T PRK13641 20 KKGLDNISFELEEGSFVALVGHTGSGKSTLMQHFNALLK--PSSGTITIAGYHITPETGNKNLKKLRKKVSLVFQFPEAQ 97 (287)
T ss_pred ccceeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCcEEEECCEECccccccchHHHHHhceEEEEeChhhh
Confidence 469999999999999999999999999999999999876 468999999987532 234567999999963 2
Q ss_pred CCCCcHHHHHHHHhhhcCCCcCcHHHHHHHHHHHHHHcCCC-cccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEE
Q 000997 914 SPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELT-SLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFM 992 (1194)
Q Consensus 914 ~~~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~-~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illL 992 (1194)
+..+||+||+.|..... ....++..++++++++.++|. +..+..+ ..||||||||++||++|+.+|++|+|
T Consensus 98 ~~~~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~~~-----~~LSgGq~qrl~laral~~~p~lLlL 169 (287)
T PRK13641 98 LFENTVLKDVEFGPKNF---GFSEDEAKEKALKWLKKVGLSEDLISKSP-----FELSGGQMRRVAIAGVMAYEPEILCL 169 (287)
T ss_pred hccchHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCChhHhhCCc-----ccCCHHHHHHHHHHHHHHcCCCEEEE
Confidence 33579999998865432 123344456788999999996 5666543 58999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCeEEEEccCcEEEEeCCC
Q 000997 993 DEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1194)
Q Consensus 993 DEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~ 1054 (1194)
||||+|||+.++..+.+.|+++.++|.|||++||+++ .+.+.||++++|+ .|++++.|+.
T Consensus 170 DEPt~gLD~~~~~~l~~~l~~l~~~g~tvlivsH~~~-~~~~~~d~v~~l~-~G~i~~~g~~ 229 (287)
T PRK13641 170 DEPAAGLDPEGRKEMMQLFKDYQKAGHTVILVTHNMD-DVAEYADDVLVLE-HGKLIKHASP 229 (287)
T ss_pred ECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHH-HHHHhCCEEEEEE-CCEEEEeCCH
Confidence 9999999999999999999999777999999999976 4678899999998 4789998875
No 191
>PRK10070 glycine betaine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.9e-36 Score=348.85 Aligned_cols=203 Identities=24% Similarity=0.300 Sum_probs=174.5
Q ss_pred cceEEeeeeeEEEeCCcEEEEEccCCCChHHHHhhhcCCCCCCeeEEEEEEcCccCChh---c----ccceeeEeecCCC
Q 000997 840 DRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQE---T----FARISGYCEQNDI 912 (1194)
Q Consensus 840 ~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~---~----~~~~~gyv~Q~~~ 912 (1194)
+...+|+|+||+|++||+++|+||||||||||+++|+|... +.+|+|.++|.++... . .++.+|||+|++.
T Consensus 39 ~~~~~L~~isl~i~~Gei~~LvG~NGsGKSTLLr~I~Gl~~--p~sG~I~i~G~~i~~~~~~~l~~~~~~~igyv~Q~~~ 116 (400)
T PRK10070 39 GLSLGVKDASLAIEEGEIFVIMGLSGSGKSTMVRLLNRLIE--PTRGQVLIDGVDIAKISDAELREVRRKKIAMVFQSFA 116 (400)
T ss_pred CCeEEEEeEEEEEcCCCEEEEECCCCchHHHHHHHHHcCCC--CCCCEEEECCEECCcCCHHHHHHHHhCCEEEEECCCc
Confidence 44568999999999999999999999999999999999876 4689999999876421 1 2357999999999
Q ss_pred CCCCCcHHHHHHHHhhhcCCCcCcHHHHHHHHHHHHHHcCCCcccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEE
Q 000997 913 HSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFM 992 (1194)
Q Consensus 913 ~~~~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illL 992 (1194)
+++.+||+||+.|...++. ....+..+.++++++.++|.+..+..+ ..|||||||||+|||||+.+|+||||
T Consensus 117 l~~~~Tv~enl~~~~~~~~---~~~~~~~~~~~e~L~~~gL~~~~~~~~-----~~LSgGq~QRv~LArAL~~~P~iLLL 188 (400)
T PRK10070 117 LMPHMTVLDNTAFGMELAG---INAEERREKALDALRQVGLENYAHSYP-----DELSGGMRQRVGLARALAINPDILLM 188 (400)
T ss_pred CCCCCCHHHHHHHHHHhcC---CCHHHHHHHHHHHHHHcCCChhhhcCc-----ccCCHHHHHHHHHHHHHhcCCCEEEE
Confidence 9999999999998765432 223444567889999999988777653 58999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCCcHHHHHhcCeEEEEccCcEEEEeCCC
Q 000997 993 DEPTSGLDARAAAIVMRTVRNIVN-TGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1194)
Q Consensus 993 DEPTsgLD~~~~~~i~~~l~~l~~-~g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~ 1054 (1194)
||||+|||+.++..+++.|+++.+ .|+|||++||+++ ++.+.+|++++|+ +|+++..|+.
T Consensus 189 DEPts~LD~~~r~~l~~~L~~l~~~~g~TIIivTHd~~-~~~~~~Dri~vL~-~G~i~~~g~~ 249 (400)
T PRK10070 189 DEAFSALDPLIRTEMQDELVKLQAKHQRTIVFISHDLD-EAMRIGDRIAIMQ-NGEVVQVGTP 249 (400)
T ss_pred ECCCccCCHHHHHHHHHHHHHHHHHCCCeEEEEECCHH-HHHHhCCEEEEEE-CCEEEecCCH
Confidence 999999999999999999999975 5899999999986 5678899999998 5799988875
No 192
>COG4525 TauB ABC-type taurine transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.6e-36 Score=300.62 Aligned_cols=201 Identities=28% Similarity=0.392 Sum_probs=177.0
Q ss_pred eEEeeeeeEEEeCCcEEEEEccCCCChHHHHhhhcCCCCCCeeEEEEEEcCccCChhcccceeeEeecCCCCCCCCcHHH
Q 000997 842 LQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQETFARISGYCEQNDIHSPGLTVLE 921 (1194)
Q Consensus 842 ~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~~~~~~~gyv~Q~~~~~~~lTv~e 921 (1194)
..+|+|||+++.+||.++++||||||||||||+++|..+ +..|+|.+||+++....- .-|.|+|++.++|.+|+.+
T Consensus 18 ~~~le~vsL~ia~ge~vv~lGpSGcGKTTLLnl~AGf~~--P~~G~i~l~~r~i~gPga--ergvVFQ~~~LlPWl~~~d 93 (259)
T COG4525 18 RSALEDVSLTIASGELVVVLGPSGCGKTTLLNLIAGFVT--PSRGSIQLNGRRIEGPGA--ERGVVFQNEALLPWLNVID 93 (259)
T ss_pred hhhhhccceeecCCCEEEEEcCCCccHHHHHHHHhcCcC--cccceEEECCEeccCCCc--cceeEeccCccchhhHHHH
Confidence 458999999999999999999999999999999999987 568999999998754322 2389999999999999999
Q ss_pred HHHHHhhhcCCCcCcHHHHHHHHHHHHHHcCCCcccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCH
Q 000997 922 SLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSGLDA 1001 (1194)
Q Consensus 922 ~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEPTsgLD~ 1001 (1194)
|+.|+..++ .+.+.++.+.+.+.+.++||.+..++.+ -+||||||||+.|||||+.+|++|+||||.+.||+
T Consensus 94 NvafgL~l~---Gi~k~~R~~~a~q~l~~VgL~~~~~~~i-----~qLSGGmrQRvGiARALa~eP~~LlLDEPfgAlDa 165 (259)
T COG4525 94 NVAFGLQLR---GIEKAQRREIAHQMLALVGLEGAEHKYI-----WQLSGGMRQRVGIARALAVEPQLLLLDEPFGALDA 165 (259)
T ss_pred HHHHHHHhc---CCCHHHHHHHHHHHHHHhCcccccccce-----EeecchHHHHHHHHHHhhcCcceEeecCchhhHHH
Confidence 999998887 4567888899999999999999887764 48999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHh-CCCEEEEEecCCcHHHHHhcCeEEEEccC-cEEEEeCCCC
Q 000997 1002 RAAAIVMRTVRNIVN-TGRTIVCTIHQPSIDIFESFDELLFMKRG-GELIYAGPLG 1055 (1194)
Q Consensus 1002 ~~~~~i~~~l~~l~~-~g~tvi~~~H~~~~~~~~~~d~~~~l~~g-G~~~~~g~~~ 1055 (1194)
-+++.++++|-++.+ +|+.++++||+.+. ..-.+++++||+.| |+++..-|++
T Consensus 166 ~tRe~mQelLldlw~~tgk~~lliTH~ieE-AlflatrLvvlsp~pgRvv~~~~~d 220 (259)
T COG4525 166 LTREQMQELLLDLWQETGKQVLLITHDIEE-ALFLATRLVVLSPGPGRVVERLPLD 220 (259)
T ss_pred HHHHHHHHHHHHHHHHhCCeEEEEeccHHH-HHhhhheeEEecCCCceeeEecCCC
Confidence 999999999998864 59999999999874 44467999999843 6788766653
No 193
>PRK13643 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.1e-35 Score=336.59 Aligned_cols=224 Identities=27% Similarity=0.363 Sum_probs=180.3
Q ss_pred eeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCceeeEEEECCccCCCC-------CCCceEEEEecCC-CC
Q 000997 149 TILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEF-------VPPRTSAYVSQQD-WQ 220 (1194)
Q Consensus 149 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~-------~~~~~~~yv~Q~d-~~ 220 (1194)
.+|+|||++|++||+++|+||||||||||+++|+|.+++. +|+|+++|.++... ..++.++||+|++ ..
T Consensus 20 ~~l~~vsl~i~~Ge~v~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~~~~~ig~v~q~~~~~ 96 (288)
T PRK13643 20 RALFDIDLEVKKGSYTALIGHTGSGKSTLLQHLNGLLQPT---EGKVTVGDIVVSSTSKQKEIKPVRKKVGVVFQFPESQ 96 (288)
T ss_pred cceeeeEEEEcCCCEEEEECCCCChHHHHHHHHhcCCCCC---CcEEEECCEECccccccccHHHHHhhEEEEecCcchh
Confidence 5999999999999999999999999999999999999876 99999999987421 1246799999986 23
Q ss_pred CCCCCHHHHHHHhhhccCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhccCcchhHHHHHHHHHhCCc-ccccccc
Q 000997 221 VAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLD-TCADTLV 299 (1194)
Q Consensus 221 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~k~~~~~~~~~~~~~~~~l~~lgL~-~~~dt~v 299 (1194)
+...||.||+.|+....+... .+...++.++++.+||. ...++.
T Consensus 97 l~~~tv~~~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~L~~~~~~~~- 141 (288)
T PRK13643 97 LFEETVLKDVAFGPQNFGIPK----------------------------------EKAEKIAAEKLEMVGLADEFWEKS- 141 (288)
T ss_pred cccchHHHHHHhHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCCChhhccCC-
Confidence 445799999998754322100 00122467889999996 344544
Q ss_pred cCccCCCCChhhhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEE
Q 000997 300 GDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVI 379 (1194)
Q Consensus 300 g~~~~~~LSGGqkqRvsia~al~~~~~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vi 379 (1194)
++.|||||||||+||++|+.+|++|+|||||+|||+.++..+.+.|+++.+. +.+|+.++|+.+++.++||+|+
T Consensus 142 ----~~~LSgGqkqrvaiA~aL~~~p~illLDEPt~gLD~~~~~~l~~~l~~l~~~--g~til~vtHd~~~~~~~~dri~ 215 (288)
T PRK13643 142 ----PFELSGGQMRRVAIAGILAMEPEVLVLDEPTAGLDPKARIEMMQLFESIHQS--GQTVVLVTHLMDDVADYADYVY 215 (288)
T ss_pred ----cccCCHHHHHHHHHHHHHHhCCCEEEEECCccCCCHHHHHHHHHHHHHHHHC--CCEEEEEecCHHHHHHhCCEEE
Confidence 4579999999999999999999999999999999999999999999988652 4566668899999999999999
Q ss_pred EEcCCeEEEecChhhHH---HHHHhcCCCCCCCCChhHHH
Q 000997 380 LLSEGQIVYQGPRVSVL---DFFASMGFSCPKRKNVADFL 416 (1194)
Q Consensus 380 lL~~G~iv~~G~~~~~~---~~F~~~G~~cp~~~~~adfl 416 (1194)
+|++|+++++|+++++. ++++..|+.+|.....++.+
T Consensus 216 ~l~~G~i~~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 255 (288)
T PRK13643 216 LLEKGHIISCGTPSDVFQEVDFLKAHELGVPKATHFADQL 255 (288)
T ss_pred EEECCEEEEECCHHHHHcCHHHHHHcCCCCChHHHHHHHH
Confidence 99999999999998874 34556677776654444433
No 194
>TIGR01978 sufC FeS assembly ATPase SufC. SufC is part of the SUF system, shown in E. coli to consist of six proteins and believed to act in Fe-S cluster formation during oxidative stress. SufC forms a complex with SufB and SufD. SufC belongs to the ATP-binding cassette transporter family (pfam00005) but is no longer thought to be part of a transporter. The complex is reported as cytosolic (PubMed:12554644) or associated with the membrane (PubMed:11943156). The SUF system also includes a cysteine desulfurase (SufS, enhanced by SufE) and a probable iron-sulfur cluster assembly scaffold protein, SufA.
Probab=100.00 E-value=7.7e-36 Score=330.79 Aligned_cols=209 Identities=21% Similarity=0.289 Sum_probs=168.4
Q ss_pred cceEEeeeeeEEEeCCcEEEEEccCCCChHHHHhhhcCCCCCCeeEEEEEEcCccCCh---hcc-cceeeEeecCCCCCC
Q 000997 840 DRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ---ETF-ARISGYCEQNDIHSP 915 (1194)
Q Consensus 840 ~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~---~~~-~~~~gyv~Q~~~~~~ 915 (1194)
+++.+|+|+|+++++||+++|+||||||||||+++|+|.....+.+|+|.++|.++.. ... +..++|++|++.+++
T Consensus 11 ~~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~ 90 (243)
T TIGR01978 11 EDKEILKGVNLTVKKGEIHAIMGPNGSGKSTLSKTIAGHPSYEVTSGTILFKGQDLLELEPDERARAGLFLAFQYPEEIP 90 (243)
T ss_pred CCEEEEeccceEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCcceEEECCEecCCCCHHHhhccceEeeeccccccC
Confidence 3457999999999999999999999999999999999984111468999999987542 122 334899999999999
Q ss_pred CCcHHHHHHHHhhhcCCC----cCcHHHHHHHHHHHHHHcCCC-cccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCEE
Q 000997 916 GLTVLESLLFSAWLRLPS----EIELETQRAFVEEVMELVELT-SLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIV 990 (1194)
Q Consensus 916 ~lTv~e~l~f~~~lr~~~----~~~~~~~~~~v~~~l~~l~l~-~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~il 990 (1194)
.+|++|++.+........ .....+..+.++++++.+++. ...+..+. ..|||||||||+||++|+.+|++|
T Consensus 91 ~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~----~~LS~G~~qrl~la~al~~~p~ll 166 (243)
T TIGR01978 91 GVSNLEFLRSALNARRSARGEEPLDLLDFLKLLKAKLALLGMDEEFLNRSVN----EGFSGGEKKRNEILQMALLEPKLA 166 (243)
T ss_pred CcCHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHcCCchhhcccccc----cCcCHHHHHHHHHHHHHhcCCCEE
Confidence 999999998764322110 012223345678899999996 34454321 249999999999999999999999
Q ss_pred EEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHh-cCeEEEEccCcEEEEeCCC
Q 000997 991 FMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFES-FDELLFMKRGGELIYAGPL 1054 (1194)
Q Consensus 991 lLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~-~d~~~~l~~gG~~~~~g~~ 1054 (1194)
+|||||+|||+.++..+.+.|++++++|+|||+++|+++ .+... +|++++|+ +|++++.|+.
T Consensus 167 llDEPt~~LD~~~~~~l~~~l~~~~~~~~tvi~vsH~~~-~~~~~~~d~i~~l~-~G~i~~~g~~ 229 (243)
T TIGR01978 167 ILDEIDSGLDIDALKIVAEGINRLREPDRSFLIITHYQR-LLNYIKPDYVHVLL-DGRIVKSGDV 229 (243)
T ss_pred EecCCcccCCHHHHHHHHHHHHHHHHCCcEEEEEEecHH-HHHhhcCCeEEEEe-CCEEEEecCH
Confidence 999999999999999999999999877999999999986 45555 79999998 5789988875
No 195
>PRK14268 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.3e-35 Score=331.53 Aligned_cols=206 Identities=27% Similarity=0.317 Sum_probs=167.4
Q ss_pred ceEEeeeeeEEEeCCcEEEEEccCCCChHHHHhhhcCCCCC---CeeEEEEEEcCccCCh-----hcccceeeEeecCCC
Q 000997 841 RLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTG---GIIEGDIYISGYPKRQ-----ETFARISGYCEQNDI 912 (1194)
Q Consensus 841 ~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~---~~~~G~i~i~g~~~~~-----~~~~~~~gyv~Q~~~ 912 (1194)
++.+|+|+||++++||++||+|+||||||||+++|+|..++ .+.+|+|.++|.++.. ..+++.+||++|++.
T Consensus 24 ~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~i~~v~q~~~ 103 (258)
T PRK14268 24 EKQALKNVSMQIPKNSVTALIGPSGCGKSTFIRCLNRMNDLIKNCRIEGKVSIEGEDIYEPDVDVVELRKNVGMVFQKPN 103 (258)
T ss_pred CeeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCcccCCCcceEEEECCEEcccccchHHHHhhhEEEEecCCc
Confidence 45699999999999999999999999999999999998652 1358999999987532 234567999999988
Q ss_pred CCCCCcHHHHHHHHhhhcCCCcCcHHHHHHHHHHHHHHcCCCcccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEE
Q 000997 913 HSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFM 992 (1194)
Q Consensus 913 ~~~~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illL 992 (1194)
+++ +|++||+.|....+ ........+.++++++.+++.+....... ..+..|||||||||+|||||+.+|+||+|
T Consensus 104 ~~~-~tv~enl~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-~~~~~LSgG~~qrv~laral~~~p~llll 178 (258)
T PRK14268 104 PFP-MSIYDNVAYGPRIH---GANKKDLDGVVENALRSAALWDETSDRLK-SPALSLSGGQQQRLCIARTLAVKPKIILF 178 (258)
T ss_pred cCc-ccHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCCcchhhhhc-CChhhCCHHHHHHHHHHHHHHcCCCEEEE
Confidence 887 89999999875432 12233334567888998888432111111 12358999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCeEEEEccCcEEEEeCCC
Q 000997 993 DEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1194)
Q Consensus 993 DEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~ 1054 (1194)
||||+|||+.++..+++.|+++.+ |+|||+++|+++ ++.+.+|++++|. +|++++.|+.
T Consensus 179 DEPt~~LD~~~~~~l~~~l~~l~~-~~tiiivsH~~~-~~~~~~d~i~~l~-~G~i~~~~~~ 237 (258)
T PRK14268 179 DEPTSALDPISTARIEDLIMNLKK-DYTIVIVTHNMQ-QAARISDYTGFFL-MGELIEFGQT 237 (258)
T ss_pred eCCCcccCHHHHHHHHHHHHHHhh-CCEEEEEECCHH-HHHHhCCEEEEEE-CCEEEEeCCH
Confidence 999999999999999999999864 899999999976 4667899999998 5899998875
No 196
>PRK15079 oligopeptide ABC transporter ATP-binding protein OppF; Provisional
Probab=100.00 E-value=1.4e-35 Score=340.15 Aligned_cols=204 Identities=23% Similarity=0.271 Sum_probs=172.6
Q ss_pred ceEEeeeeeEEEeCCcEEEEEccCCCChHHHHhhhcCCCCCCeeEEEEEEcCccCCh------hcccceeeEeecCC--C
Q 000997 841 RLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ------ETFARISGYCEQND--I 912 (1194)
Q Consensus 841 ~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~------~~~~~~~gyv~Q~~--~ 912 (1194)
...+|+||||+|++||++||+|+||||||||+++|+|... +.+|+|.++|.++.. ..+++.++||+|++ .
T Consensus 33 ~~~~l~~vsl~i~~Ge~~~lvG~sGsGKSTLlk~i~Gl~~--p~~G~I~~~G~~i~~~~~~~~~~~r~~i~~v~Q~~~~~ 110 (331)
T PRK15079 33 TLKAVDGVTLRLYEGETLGVVGESGCGKSTFARAIIGLVK--ATDGEVAWLGKDLLGMKDDEWRAVRSDIQMIFQDPLAS 110 (331)
T ss_pred ceEEEeeEEEEEcCCCEEEEECCCCCCHHHHHHHHHCCCC--CCCcEEEECCEECCcCCHHHHHHHhCceEEEecCchhh
Confidence 3679999999999999999999999999999999999876 468999999987642 12456799999997 5
Q ss_pred CCCCCcHHHHHHHHhhhcCCCcCcHHHHHHHHHHHHHHcCCC-cccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCEEE
Q 000997 913 HSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELT-SLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVF 991 (1194)
Q Consensus 913 ~~~~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~-~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~ill 991 (1194)
++|.+|+.|++.+......+ .....+.++.+.++++.+++. ...+.. +.+|||||||||+||+||+.+|++|+
T Consensus 111 l~p~~tv~~~i~~~l~~~~~-~~~~~~~~~~~~~~l~~vgl~~~~~~~~-----p~~LSgG~~QRv~iArAL~~~P~lli 184 (331)
T PRK15079 111 LNPRMTIGEIIAEPLRTYHP-KLSRQEVKDRVKAMMLKVGLLPNLINRY-----PHEFSGGQCQRIGIARALILEPKLII 184 (331)
T ss_pred cCCCCCHHHHHHHHHHHhcc-CCCHHHHHHHHHHHHHHcCCChHHhcCC-----cccCCHHHHHHHHHHHHHhcCCCEEE
Confidence 78899999999886543211 234455566788999999994 344443 35899999999999999999999999
Q ss_pred EeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCeEEEEccCcEEEEeCCC
Q 000997 992 MDEPTSGLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1194)
Q Consensus 992 LDEPTsgLD~~~~~~i~~~l~~l~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~ 1054 (1194)
|||||+|||..++..++++|+++.++ |.|||++|||++ .+.+.+|++++|. .|+++..|+.
T Consensus 185 lDEPts~LD~~~~~~i~~lL~~l~~~~~~til~iTHdl~-~~~~~~dri~vl~-~G~ive~g~~ 246 (331)
T PRK15079 185 CDEPVSALDVSIQAQVVNLLQQLQREMGLSLIFIAHDLA-VVKHISDRVLVMY-LGHAVELGTY 246 (331)
T ss_pred EeCCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCEEEEEE-CCEEEEEcCH
Confidence 99999999999999999999999764 999999999976 4667899999998 5799999975
No 197
>cd03294 ABC_Pro_Gly_Bertaine This family comprises the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporters is the obligatory coupling of ATP hydrolysis to substrate translocation. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=9.5e-36 Score=334.07 Aligned_cols=207 Identities=23% Similarity=0.320 Sum_probs=174.3
Q ss_pred ceeeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCceeeEEEECCccCCCCCC-------CceEEEEecCCC
Q 000997 147 KLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVP-------PRTSAYVSQQDW 219 (1194)
Q Consensus 147 ~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~~~-------~~~~~yv~Q~d~ 219 (1194)
..++|+|+|+++++|++++|+|||||||||||++|+|.++|. +|+|.++|.++..... ++.++|++|++.
T Consensus 36 ~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~L~Gl~~p~---~G~i~i~g~~~~~~~~~~~~~~~~~~i~~v~q~~~ 112 (269)
T cd03294 36 QTVGVNDVSLDVREGEIFVIMGLSGSGKSTLLRCINRLIEPT---SGKVLIDGQDIAAMSRKELRELRRKKISMVFQSFA 112 (269)
T ss_pred CceEeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CeEEEECCEEccccChhhhhhhhcCcEEEEecCcc
Confidence 357999999999999999999999999999999999999876 9999999987754321 357999999999
Q ss_pred CCCCCCHHHHHHHhhhccCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhccCcchhHHHHHHHHHhCCcccccccc
Q 000997 220 QVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLV 299 (1194)
Q Consensus 220 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~k~~~~~~~~~~~~~~~~l~~lgL~~~~dt~v 299 (1194)
+++.+||+||+.+.....+... ......++++++.+||.+..++.+
T Consensus 113 ~~~~~tv~e~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~ 158 (269)
T cd03294 113 LLPHRTVLENVAFGLEVQGVPR----------------------------------AEREERAAEALELVGLEGWEHKYP 158 (269)
T ss_pred cCCCCcHHHHHHHHHHhcCCCH----------------------------------HHHHHHHHHHHHHcCCHhHhhCCc
Confidence 8999999999988643321100 001123677899999988777766
Q ss_pred cCccCCCCChhhhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEE
Q 000997 300 GDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVI 379 (1194)
Q Consensus 300 g~~~~~~LSGGqkqRvsia~al~~~~~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vi 379 (1194)
+ .|||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|+++++.. +++|+.++|+.+++.+++|+++
T Consensus 159 ~-----~LS~Gq~qrv~lAral~~~p~illLDEPt~~LD~~~~~~l~~~l~~~~~~~-g~tiii~tH~~~~~~~~~d~v~ 232 (269)
T cd03294 159 D-----ELSGGMQQRVGLARALAVDPDILLMDEAFSALDPLIRREMQDELLRLQAEL-QKTIVFITHDLDEALRLGDRIA 232 (269)
T ss_pred c-----cCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhc-CCEEEEEeCCHHHHHHhcCEEE
Confidence 4 599999999999999999999999999999999999999999999987543 4556667888889999999999
Q ss_pred EEcCCeEEEecChhhHH
Q 000997 380 LLSEGQIVYQGPRVSVL 396 (1194)
Q Consensus 380 lL~~G~iv~~G~~~~~~ 396 (1194)
+|++|++++.|+.+++.
T Consensus 233 ~l~~G~i~~~g~~~~~~ 249 (269)
T cd03294 233 IMKDGRLVQVGTPEEIL 249 (269)
T ss_pred EEECCEEEEeCCHHHHH
Confidence 99999999999987764
No 198
>PRK13637 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.6e-36 Score=338.11 Aligned_cols=218 Identities=27% Similarity=0.398 Sum_probs=177.0
Q ss_pred eeeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCceeeEEEECCccCCCCC-----CCceEEEEecCCC-CC
Q 000997 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV-----PPRTSAYVSQQDW-QV 221 (1194)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~~-----~~~~~~yv~Q~d~-~~ 221 (1194)
+++|+|||++|++||+++|+||||||||||+++|+|.++|. +|+|.++|.++.... .++.++||+|++. .+
T Consensus 20 ~~~l~~vs~~i~~Ge~~~i~G~nGaGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~~~ig~v~q~~~~~~ 96 (287)
T PRK13637 20 KKALDNVNIEIEDGEFVGLIGHTGSGKSTLIQHLNGLLKPT---SGKIIIDGVDITDKKVKLSDIRKKVGLVFQYPEYQL 96 (287)
T ss_pred cceeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCC---ccEEEECCEECCCcCccHHHHhhceEEEecCchhcc
Confidence 36999999999999999999999999999999999999876 999999999876432 2467999999863 34
Q ss_pred CCCCHHHHHHHhhhccCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhccCcchhHHHHHHHHHhCCc--ccccccc
Q 000997 222 AEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLD--TCADTLV 299 (1194)
Q Consensus 222 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~k~~~~~~~~~~~~~~~~l~~lgL~--~~~dt~v 299 (1194)
...||+||+.|+....+.. . .+...+++++++.+||+ +..|+.+
T Consensus 97 ~~~tv~e~l~~~~~~~~~~-~---------------------------------~~~~~~~~~~l~~~gL~~~~~~~~~~ 142 (287)
T PRK13637 97 FEETIEKDIAFGPINLGLS-E---------------------------------EEIENRVKRAMNIVGLDYEDYKDKSP 142 (287)
T ss_pred ccccHHHHHHhHHHHCCCC-H---------------------------------HHHHHHHHHHHHHcCCCchhhccCCc
Confidence 4679999998864322110 0 01123477889999997 4555544
Q ss_pred cCccCCCCChhhhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEE
Q 000997 300 GDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVI 379 (1194)
Q Consensus 300 g~~~~~~LSGGqkqRvsia~al~~~~~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vi 379 (1194)
+.|||||||||+||+||+.+|++|+|||||+|||+.++.++.+.|+++++.. +++|+.++|...++..+||+|+
T Consensus 143 -----~~LSgGq~qrv~iAraL~~~P~llllDEPt~gLD~~~~~~l~~~l~~l~~~~-g~tvi~vtHd~~~~~~~~drv~ 216 (287)
T PRK13637 143 -----FELSGGQKRRVAIAGVVAMEPKILILDEPTAGLDPKGRDEILNKIKELHKEY-NMTIILVSHSMEDVAKLADRII 216 (287)
T ss_pred -----ccCCHHHHHHHHHHHHHHcCCCEEEEECCccCCCHHHHHHHHHHHHHHHHhc-CCEEEEEeCCHHHHHHhCCEEE
Confidence 5699999999999999999999999999999999999999999999987643 4566678899999999999999
Q ss_pred EEcCCeEEEecChhhHHH---HHHhcCCCCCC
Q 000997 380 LLSEGQIVYQGPRVSVLD---FFASMGFSCPK 408 (1194)
Q Consensus 380 lL~~G~iv~~G~~~~~~~---~F~~~G~~cp~ 408 (1194)
+|++|++++.|+.+++.+ .+...|+.+|.
T Consensus 217 ~l~~G~i~~~g~~~~~~~~~~~~~~~~~~~~~ 248 (287)
T PRK13637 217 VMNKGKCELQGTPREVFKEVETLESIGLAVPQ 248 (287)
T ss_pred EEECCEEEEECCHHHHHhCHHHHHHcCCCCCh
Confidence 999999999999988743 23344555544
No 199
>COG4181 Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=2.6e-36 Score=294.48 Aligned_cols=200 Identities=30% Similarity=0.401 Sum_probs=171.5
Q ss_pred cccceEEeeeeeEEEeCCcEEEEEccCCCChHHHHhhhcCCCCCCeeEEEEEEcCccCCh---h----cccceeeEeecC
Q 000997 838 LEDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ---E----TFARISGYCEQN 910 (1194)
Q Consensus 838 ~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~---~----~~~~~~gyv~Q~ 910 (1194)
..+...||++|++.|++||-+||+|||||||||||-+|+|... +.+|+|.+.|++... + -..+.+|||+|.
T Consensus 19 ~~~~l~IL~~V~L~v~~Ge~vaiVG~SGSGKSTLl~vlAGLd~--~ssGeV~l~G~~L~~ldEd~rA~~R~~~vGfVFQS 96 (228)
T COG4181 19 GEGELSILKGVELVVKRGETVAIVGPSGSGKSTLLAVLAGLDD--PSSGEVRLLGQPLHKLDEDARAALRARHVGFVFQS 96 (228)
T ss_pred CCcceeEeecceEEecCCceEEEEcCCCCcHHhHHHHHhcCCC--CCCceEEEcCcchhhcCHHHHHHhhccceeEEEEe
Confidence 3467889999999999999999999999999999999999987 468999999998642 1 235689999999
Q ss_pred CCCCCCCcHHHHHHHHhhhcCCCcCcHHHHHHHHHHHHHHcCCCcccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCEE
Q 000997 911 DIHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIV 990 (1194)
Q Consensus 911 ~~~~~~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~il 990 (1194)
..+.|++|..||+...+.++... .........+.++.+||.+-.+.+ +.+|||||+|||+||||++..|+||
T Consensus 97 F~Lip~ltAlENV~lPleL~ge~---~~~~~~~A~~lL~~vGLg~Rl~Hy-----P~qLSGGEQQRVAiARAfa~~P~vL 168 (228)
T COG4181 97 FHLIPNLTALENVALPLELRGES---SADSRAGAKALLEAVGLGKRLTHY-----PAQLSGGEQQRVALARAFAGRPDVL 168 (228)
T ss_pred eeccccchhhhhccchhhhcCCc---cccHHHHHHHHHHHhCcccccccC-----ccccCchHHHHHHHHHHhcCCCCEE
Confidence 99999999999999888777532 122334567889999998766554 3589999999999999999999999
Q ss_pred EEeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCCcHHHHHhcCeEEEEccCcEEEE
Q 000997 991 FMDEPTSGLDARAAAIVMRTVRNIVN-TGRTIVCTIHQPSIDIFESFDELLFMKRGGELIY 1050 (1194)
Q Consensus 991 lLDEPTsgLD~~~~~~i~~~l~~l~~-~g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~ 1050 (1194)
|.||||-+||..+...|.+++-.+.+ .|.|.|++||||. +...|||.+-|.. |+++.
T Consensus 169 fADEPTGNLD~~Tg~~iaDLlF~lnre~G~TlVlVTHD~~--LA~Rc~R~~r~~~-G~l~~ 226 (228)
T COG4181 169 FADEPTGNLDRATGDKIADLLFALNRERGTTLVLVTHDPQ--LAARCDRQLRLRS-GRLVE 226 (228)
T ss_pred eccCCCCCcchhHHHHHHHHHHHHhhhcCceEEEEeCCHH--HHHhhhheeeeec-ceecc
Confidence 99999999999999999999999864 5999999999985 5678999999985 77763
No 200
>TIGR01288 nodI ATP-binding ABC transporter family nodulation protein NodI. This model does not recognize the highly divergent NodI from Azorhizobium caulinodans.
Probab=100.00 E-value=6.1e-36 Score=341.26 Aligned_cols=206 Identities=29% Similarity=0.382 Sum_probs=174.5
Q ss_pred eeeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCceeeEEEECCccCCCCC--CCceEEEEecCCCCCCCCC
Q 000997 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV--PPRTSAYVSQQDWQVAEMT 225 (1194)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~~--~~~~~~yv~Q~d~~~~~lT 225 (1194)
.++|+|||++|++|++++|+|||||||||||++|+|.++|. +|+|.++|.++.... .++.++|++|++.+++.+|
T Consensus 17 ~~~l~~vsl~i~~Ge~~~l~G~NGaGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~i~~v~q~~~~~~~~t 93 (303)
T TIGR01288 17 KVVVNDLSFTIARGECFGLLGPNGAGKSTIARMLLGMISPD---RGKITVLGEPVPSRARLARVAIGVVPQFDNLDPEFT 93 (303)
T ss_pred eEEEcceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEECcccHHHHhhcEEEEeccccCCcCCc
Confidence 36999999999999999999999999999999999998876 999999998764321 2467999999998899999
Q ss_pred HHHHHHHhhhccCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhccCcchhHHHHHHHHHhCCcccccccccCccCC
Q 000997 226 VRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEMLK 305 (1194)
Q Consensus 226 V~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~k~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~ 305 (1194)
|+||+.+.....+... .+....++.+++.+||++..++.++
T Consensus 94 v~e~l~~~~~~~~~~~----------------------------------~~~~~~~~~ll~~~~l~~~~~~~~~----- 134 (303)
T TIGR01288 94 VRENLLVFGRYFGMST----------------------------------REIEAVIPSLLEFARLESKADVRVA----- 134 (303)
T ss_pred HHHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHCCChhHhcCchh-----
Confidence 9999987543221100 0001235678899999988887765
Q ss_pred CCChhhhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEcCCe
Q 000997 306 GISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEGQ 385 (1194)
Q Consensus 306 ~LSGGqkqRvsia~al~~~~~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~~G~ 385 (1194)
.|||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|+++++. +++|+.++|..+++.++||+|++|++|+
T Consensus 135 ~LSgG~~qrv~la~al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~--g~til~~sH~~~~~~~~~d~i~~l~~G~ 212 (303)
T TIGR01288 135 LLSGGMKRRLTLARALINDPQLLILDEPTTGLDPHARHLIWERLRSLLAR--GKTILLTTHFMEEAERLCDRLCVLESGR 212 (303)
T ss_pred hCCHHHHHHHHHHHHHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHhC--CCEEEEECCCHHHHHHhCCEEEEEECCE
Confidence 59999999999999999999999999999999999999999999998652 4566678899999999999999999999
Q ss_pred EEEecChhhHHH
Q 000997 386 IVYQGPRVSVLD 397 (1194)
Q Consensus 386 iv~~G~~~~~~~ 397 (1194)
+++.|+.+++..
T Consensus 213 i~~~g~~~~~~~ 224 (303)
T TIGR01288 213 KIAEGRPHALID 224 (303)
T ss_pred EEEEcCHHHHHh
Confidence 999999988753
No 201
>PRK14247 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1e-35 Score=330.95 Aligned_cols=209 Identities=24% Similarity=0.294 Sum_probs=169.6
Q ss_pred ceEEeeeeeEEEeCCcEEEEEccCCCChHHHHhhhcCCCCCC---eeEEEEEEcCccCCh---hcccceeeEeecCCCCC
Q 000997 841 RLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGG---IIEGDIYISGYPKRQ---ETFARISGYCEQNDIHS 914 (1194)
Q Consensus 841 ~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~---~~~G~i~i~g~~~~~---~~~~~~~gyv~Q~~~~~ 914 (1194)
++.+|+|+||++++||++||+||||||||||+++|+|...+. +.+|+|.++|.++.. ..+++.+||++|++.++
T Consensus 15 ~~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~i~~v~q~~~~~ 94 (250)
T PRK14247 15 QVEVLDGVNLEIPDNTITALMGPSGSGKSTLLRVFNRLIELYPEARVSGEVYLDGQDIFKMDVIELRRRVQMVFQIPNPI 94 (250)
T ss_pred CeeeeecceeEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCCCCceEEEECCEECCcCCHHHHhccEEEEeccCccC
Confidence 357999999999999999999999999999999999986421 368999999987632 34556799999999888
Q ss_pred CCCcHHHHHHHHhhhcCCCcCcHHHHHHHHHHHHHHcCCCcccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeC
Q 000997 915 PGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDE 994 (1194)
Q Consensus 915 ~~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illLDE 994 (1194)
+.+||.||+.+....+.. .....+..+.++++++.+++.+....... ..+.+||||||||++|||||+.+|+||+|||
T Consensus 95 ~~~tv~enl~~~~~~~~~-~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-~~~~~LSgG~~qrv~laral~~~p~lllLDE 172 (250)
T PRK14247 95 PNLSIFENVALGLKLNRL-VKSKKELQERVRWALEKAQLWDEVKDRLD-APAGKLSGGQQQRLCIARALAFQPEVLLADE 172 (250)
T ss_pred CCCcHHHHHHHHHHhccc-cCCHHHHHHHHHHHHHHcCCCcchhhhhc-CCcccCCHHHHHHHHHHHHHhcCCCEEEEcC
Confidence 899999999886533211 01223344567889999998542111111 1236899999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCeEEEEccCcEEEEeCCC
Q 000997 995 PTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1194)
Q Consensus 995 PTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~ 1054 (1194)
||+|||+.++..+.+.|+++.+ |+|||+++|+++ .+.+.+|++++|+ +|+++..|+.
T Consensus 173 P~~~LD~~~~~~l~~~l~~~~~-~~tiii~sH~~~-~~~~~~d~i~~l~-~G~i~~~g~~ 229 (250)
T PRK14247 173 PTANLDPENTAKIESLFLELKK-DMTIVLVTHFPQ-QAARISDYVAFLY-KGQIVEWGPT 229 (250)
T ss_pred CCccCCHHHHHHHHHHHHHHhc-CCEEEEEeCCHH-HHHHhcCEEEEEE-CCeEEEECCH
Confidence 9999999999999999999864 899999999986 4667899999998 5789988875
No 202
>PRK11124 artP arginine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=8.1e-36 Score=330.20 Aligned_cols=202 Identities=26% Similarity=0.355 Sum_probs=170.5
Q ss_pred ceEEeeeeeEEEeCCcEEEEEccCCCChHHHHhhhcCCCCCCeeEEEEEEcCccCC---------hhcccceeeEeecCC
Q 000997 841 RLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKR---------QETFARISGYCEQND 911 (1194)
Q Consensus 841 ~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~---------~~~~~~~~gyv~Q~~ 911 (1194)
++.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++. ....++.++|++|++
T Consensus 14 ~~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~~~~~~~~~~~~~~~~i~~~~q~~ 91 (242)
T PRK11124 14 AHQALFDITLDCPQGETLVLLGPSGAGKSSLLRVLNLLEM--PRSGTLNIAGNHFDFSKTPSDKAIRELRRNVGMVFQQY 91 (242)
T ss_pred CeeeEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEecccccccchhhHHHHHhheEEEecCc
Confidence 4579999999999999999999999999999999999876 46899999998652 123456789999999
Q ss_pred CCCCCCcHHHHHHHH-hhhcCCCcCcHHHHHHHHHHHHHHcCCCcccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCEE
Q 000997 912 IHSPGLTVLESLLFS-AWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIV 990 (1194)
Q Consensus 912 ~~~~~lTv~e~l~f~-~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~il 990 (1194)
.+++.+|+.||+.+. .... .....+....+.++++.+++.+..+..+ ..||||||||++|||+|+.+|++|
T Consensus 92 ~~~~~~tv~e~i~~~~~~~~---~~~~~~~~~~~~~~l~~~gl~~~~~~~~-----~~LS~G~~qrv~laral~~~p~ll 163 (242)
T PRK11124 92 NLWPHLTVQQNLIEAPCRVL---GLSKDQALARAEKLLERLRLKPYADRFP-----LHLSGGQQQRVAIARALMMEPQVL 163 (242)
T ss_pred cccCCCcHHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCChhhhhCCh-----hhCCHHHHHHHHHHHHHhcCCCEE
Confidence 999999999999753 2221 1222333456788999999987666543 589999999999999999999999
Q ss_pred EEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCeEEEEccCcEEEEeCCC
Q 000997 991 FMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1194)
Q Consensus 991 lLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~ 1054 (1194)
+|||||+|||+.++..+.+.|+++.++|+|||+++|+++ ++.+.+|++++|. +|++++.|+.
T Consensus 164 ilDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sh~~~-~~~~~~d~i~~l~-~g~i~~~~~~ 225 (242)
T PRK11124 164 LFDEPTAALDPEITAQIVSIIRELAETGITQVIVTHEVE-VARKTASRVVYME-NGHIVEQGDA 225 (242)
T ss_pred EEcCCCCcCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhcCEEEEEE-CCEEEEeCCH
Confidence 999999999999999999999999777999999999986 4667799999998 5899998875
No 203
>PRK11614 livF leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.5e-36 Score=330.47 Aligned_cols=201 Identities=21% Similarity=0.319 Sum_probs=167.8
Q ss_pred ceEEeeeeeEEEeCCcEEEEEccCCCChHHHHhhhcCCCCCCeeEEEEEEcCccCChh----cccceeeEeecCCCCCCC
Q 000997 841 RLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQE----TFARISGYCEQNDIHSPG 916 (1194)
Q Consensus 841 ~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~----~~~~~~gyv~Q~~~~~~~ 916 (1194)
.+.+|+|+||++++||++||+||||||||||+++|+|..+ +.+|+|.++|.+.... ..++.++|++|++.+++.
T Consensus 17 ~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--p~~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~ 94 (237)
T PRK11614 17 KIQALHEVSLHINQGEIVTLIGANGAGKTTLLGTLCGDPR--ATSGRIVFDGKDITDWQTAKIMREAVAIVPEGRRVFSR 94 (237)
T ss_pred CceeeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHcCCCC--CCCceEEECCEecCCCCHHHHHHhCEEEeccCcccCCC
Confidence 3579999999999999999999999999999999999876 4689999999876431 245679999999988999
Q ss_pred CcHHHHHHHHhhhcCCCcCcHHHHHHHHHHHHHHc-CCCcccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCC
Q 000997 917 LTVLESLLFSAWLRLPSEIELETQRAFVEEVMELV-ELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEP 995 (1194)
Q Consensus 917 lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l-~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEP 995 (1194)
+||.||+.+..... ......+.++++++.+ ++.+..+.. +..||||||||++|||+|+.+|+||+||||
T Consensus 95 ~tv~~~l~~~~~~~-----~~~~~~~~~~~~l~~~~~l~~~~~~~-----~~~LS~G~~qrl~la~al~~~p~illlDEP 164 (237)
T PRK11614 95 MTVEENLAMGGFFA-----ERDQFQERIKWVYELFPRLHERRIQR-----AGTMSGGEQQMLAIGRALMSQPRLLLLDEP 164 (237)
T ss_pred CcHHHHHHHhhhcc-----ChhHHHHHHHHHHHHHHHHHHHHhCc-----hhhCCHHHHHHHHHHHHHHhCCCEEEEcCc
Confidence 99999998754221 1122233466777777 465544433 357999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCeEEEEccCcEEEEeCCCC
Q 000997 996 TSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLG 1055 (1194)
Q Consensus 996 TsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~~ 1055 (1194)
|+|||+.++..+.+.|++++++|+|||+++|+++ ++.+.+|++++|++ |++++.|+..
T Consensus 165 t~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~-G~i~~~~~~~ 222 (237)
T PRK11614 165 SLGLAPIIIQQIFDTIEQLREQGMTIFLVEQNAN-QALKLADRGYVLEN-GHVVLEDTGD 222 (237)
T ss_pred cccCCHHHHHHHHHHHHHHHHCCCEEEEEeCcHH-HHHhhCCEEEEEeC-CEEEeeCCHH
Confidence 9999999999999999999877999999999976 57788999999985 7999998753
No 204
>TIGR03415 ABC_choXWV_ATP choline ABC transporter, ATP-binding protein. Members of this protein family are the ATP-binding subunit of a three-protein transporter. This family belongs, more broadly, to the family of proline and glycine-betaine transporters, but members have been identified by direct characterization and by bioinformatic means as choline transporters. Many species have several closely-related members of this family, probably with variable abilities to act additionally on related quaternary amines.
Probab=100.00 E-value=8.8e-36 Score=344.83 Aligned_cols=205 Identities=22% Similarity=0.325 Sum_probs=176.1
Q ss_pred ccceEEeeeeeEEEeCCcEEEEEccCCCChHHHHhhhcCCCCCCeeEEEEEEcCc----cCC---hhc---c-cceeeEe
Q 000997 839 EDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGY----PKR---QET---F-ARISGYC 907 (1194)
Q Consensus 839 ~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~----~~~---~~~---~-~~~~gyv 907 (1194)
++...+|+|+||+|++||+++|||+||||||||+++|+|... +.+|+|+++|. ++. ... + ++.++||
T Consensus 34 ~g~~~~l~~vsf~i~~Gei~~I~G~nGsGKSTLlr~L~Gl~~--p~~G~I~idG~~~~~~i~~~~~~~l~~~r~~~i~~v 111 (382)
T TIGR03415 34 TGLVVGVANASLDIEEGEICVLMGLSGSGKSSLLRAVNGLNP--VSRGSVLVKDGDGSIDVANCDAATLRRLRTHRVSMV 111 (382)
T ss_pred hCCEEEEEeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCC--CCCcEEEECCEecccccccCCHHHHHHHhcCCEEEE
Confidence 456789999999999999999999999999999999999876 56899999996 221 111 2 2579999
Q ss_pred ecCCCCCCCCcHHHHHHHHhhhcCCCcCcHHHHHHHHHHHHHHcCCCcccCCcccCCCCCCCCHHHHHHHHHHHHHhhCC
Q 000997 908 EQNDIHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANP 987 (1194)
Q Consensus 908 ~Q~~~~~~~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p 987 (1194)
+|++.++|.+||+||+.|+...+ .....+..+.++++++.++|.+..+... ..||||||||++|||||+.+|
T Consensus 112 fQ~~~l~p~~Tv~eNi~~~~~~~---g~~~~~~~~~a~e~le~vgL~~~~~~~~-----~~LSgGq~QRV~LARALa~~P 183 (382)
T TIGR03415 112 FQKFALMPWLTVEENVAFGLEMQ---GMPEAERRKRVDEQLELVGLAQWADKKP-----GELSGGMQQRVGLARAFAMDA 183 (382)
T ss_pred ECCCcCCCCCcHHHHHHHHHHhc---CCCHHHHHHHHHHHHHHcCCchhhcCCh-----hhCCHHHHHHHHHHHHHhcCC
Confidence 99999999999999999876443 2334555667889999999988777654 579999999999999999999
Q ss_pred CEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCeEEEEccCcEEEEeCCCC
Q 000997 988 SIVFMDEPTSGLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLG 1055 (1194)
Q Consensus 988 ~illLDEPTsgLD~~~~~~i~~~l~~l~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~~ 1055 (1194)
+||+|||||+|||+.++..+++.|+++.++ |+|||++|||++ ++.+.+|++++|+ +|+++..|+..
T Consensus 184 ~ILLlDEPts~LD~~~r~~l~~~L~~l~~~~~~TII~iTHdl~-e~~~l~DrI~vl~-~G~iv~~g~~~ 250 (382)
T TIGR03415 184 DILLMDEPFSALDPLIRTQLQDELLELQAKLNKTIIFVSHDLD-EALKIGNRIAIME-GGRIIQHGTPE 250 (382)
T ss_pred CEEEEECCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEE-CCEEEEecCHH
Confidence 999999999999999999999999999765 999999999986 5678899999998 57999999863
No 205
>cd03219 ABC_Mj1267_LivG_branched The Mj1267/LivG ABC transporter subfamily is involved in the transport of the hydrophobic amino acids leucine, isoleucine and valine. MJ1267 is a branched-chain amino acid transporter with 29% similarity to both the LivF and LivG components of the E. coli branched-chain amino acid transporter. MJ1267 contains an insertion from residues 114 to 123 characteristic of LivG (Leucine-Isoleucine-Valine) homologs. The branched-chain amino acid transporter from E. coli comprises a heterodimer of ABCs (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ).
Probab=100.00 E-value=8.9e-36 Score=328.74 Aligned_cols=214 Identities=26% Similarity=0.370 Sum_probs=173.4
Q ss_pred eeeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCceeeEEEECCccCCCCCC----CceEEEEecCCCCCCC
Q 000997 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVP----PRTSAYVSQQDWQVAE 223 (1194)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~~~----~~~~~yv~Q~d~~~~~ 223 (1194)
.++|+|+|+++++|++++|+|||||||||||++|+|.+++. +|+|.++|.++..... ++.++|++|++.+++.
T Consensus 13 ~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~l~~~ 89 (236)
T cd03219 13 LVALDDVSFSVRPGEIHGLIGPNGAGKTTLFNLISGFLRPT---SGSVLFDGEDITGLPPHEIARLGIGRTFQIPRLFPE 89 (236)
T ss_pred EEEecCceEEecCCcEEEEECCCCCCHHHHHHHHcCCCCCC---CceEEECCEECCCCCHHHHHhcCEEEEecccccccC
Confidence 46999999999999999999999999999999999998776 9999999988765432 3469999999999999
Q ss_pred CCHHHHHHHhhhccCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhccCcchhHHHHHHHHHhCCcccccccccCcc
Q 000997 224 MTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEM 303 (1194)
Q Consensus 224 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~k~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~ 303 (1194)
+||+||+.+.....+... .. .. .. ... ..+....++++++.+||++..++.+
T Consensus 90 ~tv~~~l~~~~~~~~~~~-~~------~~---~~-~~~-------------~~~~~~~~~~~l~~~~l~~~~~~~~---- 141 (236)
T cd03219 90 LTVLENVMVAAQARTGSG-LL------LA---RA-RRE-------------EREARERAEELLERVGLADLADRPA---- 141 (236)
T ss_pred CCHHHHHHHHHhhccccc-cc------cc---cc-ccc-------------HHHHHHHHHHHHHHcCccchhhCCh----
Confidence 999999988654321100 00 00 00 000 0011234778899999987766655
Q ss_pred CCCCChhhhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEcC
Q 000997 304 LKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSE 383 (1194)
Q Consensus 304 ~~~LSGGqkqRvsia~al~~~~~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~~ 383 (1194)
+.|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++++ . +++|+.++|+.+++.+++|+|++|++
T Consensus 142 -~~LSgG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~-~~tii~vsH~~~~~~~~~d~i~~l~~ 218 (236)
T cd03219 142 -GELSYGQQRRLEIARALATDPKLLLLDEPAAGLNPEETEELAELIRELRE-R-GITVLLVEHDMDVVMSLADRVTVLDQ 218 (236)
T ss_pred -hhCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHH-C-CCEEEEEecCHHHHHHhCCEEEEEeC
Confidence 46999999999999999999999999999999999999999999999875 3 44566688888999999999999999
Q ss_pred CeEEEecChhhH
Q 000997 384 GQIVYQGPRVSV 395 (1194)
Q Consensus 384 G~iv~~G~~~~~ 395 (1194)
|++++.|+++++
T Consensus 219 G~i~~~~~~~~~ 230 (236)
T cd03219 219 GRVIAEGTPDEV 230 (236)
T ss_pred CEEEeecCHHHh
Confidence 999999988765
No 206
>COG4559 ABC-type hemin transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=4.5e-36 Score=303.59 Aligned_cols=206 Identities=28% Similarity=0.466 Sum_probs=174.3
Q ss_pred eeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCceeeEEEECCccCCCCCC---CceEEEEecCCCCCCCCC
Q 000997 149 TILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVP---PRTSAYVSQQDWQVAEMT 225 (1194)
Q Consensus 149 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~lT 225 (1194)
.+|++||++++||||++|+||||||||||||+|+|.+.|+ +|++++||.+++.+.+ .+.-+..+|+..+-+..|
T Consensus 15 ~ll~~vsl~~~pGev~ailGPNGAGKSTlLk~LsGel~p~---~G~v~~~g~~l~~~~~~~lA~~raVlpQ~s~laFpFt 91 (259)
T COG4559 15 RLLDGVSLDLRPGEVLAILGPNGAGKSTLLKALSGELSPD---SGEVTLNGVPLNSWPPEELARHRAVLPQNSSLAFPFT 91 (259)
T ss_pred eeccCcceeccCCcEEEEECCCCccHHHHHHHhhCccCCC---CCeEeeCCcChhhCCHHHHHHHhhhcccCcccccceE
Confidence 5999999999999999999999999999999999999887 9999999999987754 356689999987777789
Q ss_pred HHHHHHHhhhccCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhccCcchhHHHHHHHHHhCCcccccccccCccCC
Q 000997 226 VRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEMLK 305 (1194)
Q Consensus 226 V~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~k~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~ 305 (1194)
|+|-+.++..-.+.+.. |. +....++.+|...++.+.+... .+
T Consensus 92 v~eVV~mGr~p~~~g~~-----------------~~---------------e~~~i~~~ala~~d~~~la~R~-----y~ 134 (259)
T COG4559 92 VQEVVQMGRIPHRSGRE-----------------PE---------------EDERIAAQALAATDLSGLAGRD-----YR 134 (259)
T ss_pred HHHHHHhcccccccCCC-----------------ch---------------hhHHHHHHHHHHcChhhhhccc-----hh
Confidence 99999998654422211 00 1133477788888888776543 35
Q ss_pred CCChhhhhHHHHHHHHhC------CCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEE
Q 000997 306 GISGGQKKRLTTGELLVG------PARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVI 379 (1194)
Q Consensus 306 ~LSGGqkqRvsia~al~~------~~~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vi 379 (1194)
.|||||||||.+||.|+. ++++||||||||+||......+++..|++++. +..|+.++|+.+-+..++|+|+
T Consensus 135 ~LSGGEqQRVqlARvLaQl~~~v~~~r~L~LDEPtsaLDi~HQ~~tl~laR~la~~--g~~V~~VLHDLNLAA~YaDriv 212 (259)
T COG4559 135 TLSGGEQQRVQLARVLAQLWPPVPSGRWLFLDEPTSALDIAHQHHTLRLARQLARE--GGAVLAVLHDLNLAAQYADRIV 212 (259)
T ss_pred hcCchHHHHHHHHHHHHHccCCCCCCceEEecCCccccchHHHHHHHHHHHHHHhc--CCcEEEEEccchHHHHhhheee
Confidence 799999999999999985 44699999999999999999999999999975 3556668899999999999999
Q ss_pred EEcCCeEEEecChhhHH
Q 000997 380 LLSEGQIVYQGPRVSVL 396 (1194)
Q Consensus 380 lL~~G~iv~~G~~~~~~ 396 (1194)
+|++||++..|++++++
T Consensus 213 ll~~Grv~a~g~p~~vl 229 (259)
T COG4559 213 LLHQGRVIASGSPQDVL 229 (259)
T ss_pred eeeCCeEeecCCHHHhc
Confidence 99999999999998876
No 207
>PRK13650 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.7e-35 Score=333.55 Aligned_cols=204 Identities=23% Similarity=0.325 Sum_probs=170.3
Q ss_pred eeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCceeeEEEECCccCCCCC---CCceEEEEecCCC-CCCCC
Q 000997 149 TILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV---PPRTSAYVSQQDW-QVAEM 224 (1194)
Q Consensus 149 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~~---~~~~~~yv~Q~d~-~~~~l 224 (1194)
.+|+|+|++|++|++++|+||||||||||+++|+|.++|. +|+|.++|.++.... .++.++|++|++. .++.+
T Consensus 21 ~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~i~~v~q~~~~~~~~~ 97 (279)
T PRK13650 21 YTLNDVSFHVKQGEWLSIIGHNGSGKSTTVRLIDGLLEAE---SGQIIIDGDLLTEENVWDIRHKIGMVFQNPDNQFVGA 97 (279)
T ss_pred eeeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CcEEEECCEECCcCcHHHHHhhceEEEcChHHhcccc
Confidence 5999999999999999999999999999999999999876 999999999875432 2357999999973 67788
Q ss_pred CHHHHHHHhhhccCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhccCcchhHHHHHHHHHhCCcccccccccCccC
Q 000997 225 TVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEML 304 (1194)
Q Consensus 225 TV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~k~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~ 304 (1194)
||+|||.|+....+... .+....++++++.+||++..+..+
T Consensus 98 tv~eni~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~gL~~~~~~~~----- 138 (279)
T PRK13650 98 TVEDDVAFGLENKGIPH----------------------------------EEMKERVNEALELVGMQDFKEREP----- 138 (279)
T ss_pred cHHHHHHhhHHhCCCCH----------------------------------HHHHHHHHHHHHHCCCHhHhhCCc-----
Confidence 99999988643221100 001224778899999987777655
Q ss_pred CCCChhhhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEcCC
Q 000997 305 KGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEG 384 (1194)
Q Consensus 305 ~~LSGGqkqRvsia~al~~~~~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~~G 384 (1194)
..|||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|+++++.. +++|+.++|..+++ ..+|+|++|++|
T Consensus 139 ~~LSgGq~qrv~lAral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~l~~~~-g~tilivtH~~~~~-~~~dri~~l~~G 216 (279)
T PRK13650 139 ARLSGGQKQRVAIAGAVAMRPKIIILDEATSMLDPEGRLELIKTIKGIRDDY-QMTVISITHDLDEV-ALSDRVLVMKNG 216 (279)
T ss_pred ccCCHHHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhc-CCEEEEEecCHHHH-HhCCEEEEEECC
Confidence 4699999999999999999999999999999999999999999999987643 45555577778887 589999999999
Q ss_pred eEEEecChhhHH
Q 000997 385 QIVYQGPRVSVL 396 (1194)
Q Consensus 385 ~iv~~G~~~~~~ 396 (1194)
+++..|+++++.
T Consensus 217 ~i~~~g~~~~~~ 228 (279)
T PRK13650 217 QVESTSTPRELF 228 (279)
T ss_pred EEEEECCHHHHH
Confidence 999999988764
No 208
>PRK13644 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=7.2e-36 Score=335.74 Aligned_cols=201 Identities=24% Similarity=0.332 Sum_probs=170.9
Q ss_pred eEEeeeeeEEEeCCcEEEEEccCCCChHHHHhhhcCCCCCCeeEEEEEEcCccCCh----hcccceeeEeecCCC-CCCC
Q 000997 842 LQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ----ETFARISGYCEQNDI-HSPG 916 (1194)
Q Consensus 842 ~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~----~~~~~~~gyv~Q~~~-~~~~ 916 (1194)
+.+|+||||+|++||++||+||||||||||+++|+|..+ +.+|+|.++|.++.. ...++.+||++|++. .+..
T Consensus 15 ~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~~ 92 (274)
T PRK13644 15 TPALENINLVIKKGEYIGIIGKNGSGKSTLALHLNGLLR--PQKGKVLVSGIDTGDFSKLQGIRKLVGIVFQNPETQFVG 92 (274)
T ss_pred CceeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCceEEECCEECCccccHHHHHhheEEEEEChhhhccc
Confidence 469999999999999999999999999999999999876 468999999987642 234567999999975 3567
Q ss_pred CcHHHHHHHHhhhcCCCcCcHHHHHHHHHHHHHHcCCCcccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCC
Q 000997 917 LTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPT 996 (1194)
Q Consensus 917 lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEPT 996 (1194)
.|+.||+.|..... .....+..+.++++++.+++.+..+..+ ..||+|||||++||+||+.+|+||+|||||
T Consensus 93 ~tv~enl~~~~~~~---~~~~~~~~~~~~~~l~~~gl~~~~~~~~-----~~LS~G~~qrv~laral~~~p~lllLDEPt 164 (274)
T PRK13644 93 RTVEEDLAFGPENL---CLPPIEIRKRVDRALAEIGLEKYRHRSP-----KTLSGGQGQCVALAGILTMEPECLIFDEVT 164 (274)
T ss_pred chHHHHHHhhHHHc---CCCHHHHHHHHHHHHHHCCCHHHhcCCc-----ccCCHHHHHHHHHHHHHHcCCCEEEEeCCc
Confidence 89999998865332 1233444566888999999987766543 589999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCeEEEEccCcEEEEeCCCC
Q 000997 997 SGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLG 1055 (1194)
Q Consensus 997 sgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~~ 1055 (1194)
+|||+.++..+++.|++++++|.|||++||+++ ++ +.+|++++|++ |++++.|+..
T Consensus 165 ~gLD~~~~~~l~~~l~~l~~~g~til~~tH~~~-~~-~~~d~v~~l~~-G~i~~~g~~~ 220 (274)
T PRK13644 165 SMLDPDSGIAVLERIKKLHEKGKTIVYITHNLE-EL-HDADRIIVMDR-GKIVLEGEPE 220 (274)
T ss_pred ccCCHHHHHHHHHHHHHHHhCCCEEEEEecCHH-HH-hhCCEEEEEEC-CEEEEECCHH
Confidence 999999999999999999877999999999986 34 66999999985 7899998853
No 209
>PRK13548 hmuV hemin importer ATP-binding subunit; Provisional
Probab=100.00 E-value=9.1e-36 Score=332.34 Aligned_cols=203 Identities=27% Similarity=0.398 Sum_probs=170.7
Q ss_pred cceEEeeeeeEEEeCCcEEEEEccCCCChHHHHhhhcCCCCCCeeEEEEEEcCccCCh---hcccceeeEeecCCCCCCC
Q 000997 840 DRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ---ETFARISGYCEQNDIHSPG 916 (1194)
Q Consensus 840 ~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~---~~~~~~~gyv~Q~~~~~~~ 916 (1194)
+++.+|+|+||++++|++++|+||||||||||+++|+|..+ +.+|+|.++|.++.. ..+++.++|++|++.+++.
T Consensus 13 ~~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~--p~~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~~ 90 (258)
T PRK13548 13 GGRTLLDDVSLTLRPGEVVAILGPNGAGKSTLLRALSGELS--PDSGEVRLNGRPLADWSPAELARRRAVLPQHSSLSFP 90 (258)
T ss_pred CCeeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCCEEEECCEEcccCCHHHhhhheEEEccCCcCCCC
Confidence 34579999999999999999999999999999999999866 468999999987532 2345679999999888888
Q ss_pred CcHHHHHHHHhhhcCCCcCcHHHHHHHHHHHHHHcCCCcccCCcccCCCCCCCCHHHHHHHHHHHHHh------hCCCEE
Q 000997 917 LTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELV------ANPSIV 990 (1194)
Q Consensus 917 lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~------~~p~il 990 (1194)
+||+||+.+...... .......+.++++++.+++.+..+..+ ..|||||||||+||++|+ .+|++|
T Consensus 91 ~tv~e~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSgGe~qrv~la~al~~~~~~~~~p~ll 162 (258)
T PRK13548 91 FTVEEVVAMGRAPHG---LSRAEDDALVAAALAQVDLAHLAGRDY-----PQLSGGEQQRVQLARVLAQLWEPDGPPRWL 162 (258)
T ss_pred CCHHHHHHhhhcccC---CCcHHHHHHHHHHHHHcCCHhHhcCCc-----ccCCHHHHHHHHHHHHHhcccccCCCCCEE
Confidence 999999987543211 112233456788999999987666643 589999999999999999 599999
Q ss_pred EEeCCCCCCCHHHHHHHHHHHHHHH-hCCCEEEEEecCCcHHHHHhcCeEEEEccCcEEEEeCCC
Q 000997 991 FMDEPTSGLDARAAAIVMRTVRNIV-NTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1194)
Q Consensus 991 lLDEPTsgLD~~~~~~i~~~l~~l~-~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~ 1054 (1194)
+|||||+|||+.++..+.+.|++++ ++|.|||+++|+++ .+...+|++++|.+ |++++.|+.
T Consensus 163 lLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~-G~i~~~~~~ 225 (258)
T PRK13548 163 LLDEPTSALDLAHQHHVLRLARQLAHERGLAVIVVLHDLN-LAARYADRIVLLHQ-GRLVADGTP 225 (258)
T ss_pred EEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHH-HHHHhcCEEEEEEC-CEEEeeCCH
Confidence 9999999999999999999999997 67999999999976 46678999999984 789888875
No 210
>PRK14267 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.8e-35 Score=329.76 Aligned_cols=209 Identities=25% Similarity=0.268 Sum_probs=168.8
Q ss_pred ceEEeeeeeEEEeCCcEEEEEccCCCChHHHHhhhcCCCCCC---eeEEEEEEcCccCC-----hhcccceeeEeecCCC
Q 000997 841 RLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGG---IIEGDIYISGYPKR-----QETFARISGYCEQNDI 912 (1194)
Q Consensus 841 ~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~---~~~G~i~i~g~~~~-----~~~~~~~~gyv~Q~~~ 912 (1194)
++.+|+|+|+++++||++||+||||||||||+++|+|..++. +.+|+|.++|.++. ...+++.++|++|++.
T Consensus 16 ~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~i~~~~q~~~ 95 (253)
T PRK14267 16 SNHVIKGVDLKIPQNGVFALMGPSGCGKSTLLRTFNRLLELNEEARVEGEVRLFGRNIYSPDVDPIEVRREVGMVFQYPN 95 (253)
T ss_pred CeeeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCcccCCCCceEEEECCEEccccccChHHHhhceeEEecCCc
Confidence 356999999999999999999999999999999999986532 35899999998763 1234567999999999
Q ss_pred CCCCCcHHHHHHHHhhhcCCCcCcHHHHHHHHHHHHHHcCCCcccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEE
Q 000997 913 HSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFM 992 (1194)
Q Consensus 913 ~~~~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illL 992 (1194)
+++.+|+.||+.+....+.. ........+.++++++.+++......... ..+..||||||||++|||+|+.+|++|+|
T Consensus 96 ~~~~~tv~enl~~~~~~~~~-~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-~~~~~LS~G~~qrv~laral~~~p~llll 173 (253)
T PRK14267 96 PFPHLTIYDNVAIGVKLNGL-VKSKKELDERVEWALKKAALWDEVKDRLN-DYPSNLSGGQRQRLVIARALAMKPKILLM 173 (253)
T ss_pred cCCCCcHHHHHHHHHHhcCc-cCCHHHHHHHHHHHHHHcCCccchhhhhc-cChhhCCHHHHHHHHHHHHHhcCCCEEEE
Confidence 99999999999886543211 01223334567888888887532111111 12368999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCeEEEEccCcEEEEeCCC
Q 000997 993 DEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1194)
Q Consensus 993 DEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~ 1054 (1194)
||||+|||+.++..+.+.|+++++ ++|||+++|+++ .+...+|++++|+ +|+++..|+.
T Consensus 174 DEP~~~LD~~~~~~l~~~l~~~~~-~~tiii~sH~~~-~~~~~~d~i~~l~-~G~i~~~~~~ 232 (253)
T PRK14267 174 DEPTANIDPVGTAKIEELLFELKK-EYTIVLVTHSPA-QAARVSDYVAFLY-LGKLIEVGPT 232 (253)
T ss_pred cCCCccCCHHHHHHHHHHHHHHhh-CCEEEEEECCHH-HHHhhCCEEEEEE-CCEEEEeCCH
Confidence 999999999999999999999865 799999999986 4677899999998 4799998875
No 211
>TIGR03411 urea_trans_UrtD urea ABC transporter, ATP-binding protein UrtD. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=100.00 E-value=1.2e-35 Score=328.89 Aligned_cols=204 Identities=24% Similarity=0.329 Sum_probs=170.0
Q ss_pred ceEEeeeeeEEEeCCcEEEEEccCCCChHHHHhhhcCCCCCCeeEEEEEEcCccCChh----cccceeeEeecCCCCCCC
Q 000997 841 RLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQE----TFARISGYCEQNDIHSPG 916 (1194)
Q Consensus 841 ~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~----~~~~~~gyv~Q~~~~~~~ 916 (1194)
++.+|+|+||++++||+++|+||||||||||+++|+|... +.+|+|.++|.++... ..++.++|++|++.+++.
T Consensus 14 ~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~--p~~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~ 91 (242)
T TIGR03411 14 GFKALNDLSLYVDPGELRVIIGPNGAGKTTMMDVITGKTR--PDEGSVLFGGTDLTGLPEHQIARAGIGRKFQKPTVFEN 91 (242)
T ss_pred CeEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCCCeEEECCeecCCCCHHHHHhcCeeEeccccccCCC
Confidence 4579999999999999999999999999999999999866 4689999999875421 123569999999999999
Q ss_pred CcHHHHHHHHhhhcCC-----CcCcHHHHHHHHHHHHHHcCCCcccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCEEE
Q 000997 917 LTVLESLLFSAWLRLP-----SEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVF 991 (1194)
Q Consensus 917 lTv~e~l~f~~~lr~~-----~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~ill 991 (1194)
+|++||+.+....... .........+.++++++.+++.+..+..+ ..||||||||++|||||+.+|++|+
T Consensus 92 ~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~Ge~qrv~laral~~~p~~ll 166 (242)
T TIGR03411 92 LTVFENLELALPRDKSVFASLFFRLSAEEKDRIEEVLETIGLADEADRLA-----GLLSHGQKQWLEIGMLLMQDPKLLL 166 (242)
T ss_pred CCHHHHHHHhhhcccccccccccccHHHHHHHHHHHHHHcCCchhhcCCh-----hhCCHHHHHHHHHHHHHhcCCCEEE
Confidence 9999999885431100 00112234456889999999987666543 5799999999999999999999999
Q ss_pred EeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCeEEEEccCcEEEEeCCC
Q 000997 992 MDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1194)
Q Consensus 992 LDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~ 1054 (1194)
|||||+|||+.++..+++.|+++.+ ++|||++||+++ ++.+.||++++|++ |+++..|+.
T Consensus 167 lDEPt~~LD~~~~~~l~~~l~~~~~-~~tii~~sH~~~-~~~~~~d~i~~l~~-g~~~~~~~~ 226 (242)
T TIGR03411 167 LDEPVAGMTDEETEKTAELLKSLAG-KHSVVVVEHDME-FVRSIADKVTVLHQ-GSVLAEGSL 226 (242)
T ss_pred ecCCccCCCHHHHHHHHHHHHHHhc-CCEEEEEECCHH-HHHHhCCEEEEEEC-CeEEeeCCH
Confidence 9999999999999999999999865 799999999976 46678999999985 788888875
No 212
>KOG0066 consensus eIF2-interacting protein ABC50 (ABC superfamily) [Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=6.3e-35 Score=319.04 Aligned_cols=210 Identities=19% Similarity=0.283 Sum_probs=157.1
Q ss_pred ccceeEeecceeeeecccccccccccccceEEeeeeeEEEeCCcEEEEEccCCCChHHHHhhhcCCCCCCeeEEEEEEcC
Q 000997 813 QPLSMAFGNINYFVDVPVELKQEGVLEDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISG 892 (1194)
Q Consensus 813 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g 892 (1194)
.|..+-.++++|.++ +.++++++++|-|.--..+||+||||.||||||++|.|... +..|+..-|
T Consensus 583 ~PPvLGlH~VtFgy~------------gqkpLFkkldFGiDmdSRiaIVGPNGVGKSTlLkLL~Gkl~--P~~GE~RKn- 647 (807)
T KOG0066|consen 583 NPPVLGLHDVTFGYP------------GQKPLFKKLDFGIDMDSRIAIVGPNGVGKSTLLKLLIGKLD--PNDGELRKN- 647 (807)
T ss_pred CCCeeecccccccCC------------CCCchhhcccccccccceeEEECCCCccHHHHHHHHhcCCC--CCcchhhcc-
Confidence 344566667766542 56788999999999999999999999999999999999876 446664332
Q ss_pred ccCChhcccceeeEeecCC--CCCCCCcHHHHHHHHhhhcCCCcCcHHHHHHHHHHHHHHcCCCcccCCcccCCCCCCCC
Q 000997 893 YPKRQETFARISGYCEQND--IHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLS 970 (1194)
Q Consensus 893 ~~~~~~~~~~~~gyv~Q~~--~~~~~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LS 970 (1194)
.+-.+|+..|.. .+-..-|.-|.|.-.. .++. +.....+-.+||...++++- +..||
T Consensus 648 -------hrL~iG~FdQh~~E~L~~Eetp~EyLqr~F------Nlpy----q~ARK~LG~fGL~sHAHTik----ikdLS 706 (807)
T KOG0066|consen 648 -------HRLRIGWFDQHANEALNGEETPVEYLQRKF------NLPY----QEARKQLGTFGLASHAHTIK----IKDLS 706 (807)
T ss_pred -------ceeeeechhhhhHHhhccccCHHHHHHHhc------CCCh----HHHHHHhhhhhhhhccceEe----eeecC
Confidence 233578888864 3444567777764211 1122 22456788889988888753 46899
Q ss_pred HHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCeEEEEccCcEEEE
Q 000997 971 TEQRKRLTIAVELVANPSIVFMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIY 1050 (1194)
Q Consensus 971 gGqrqrl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~ 1050 (1194)
|||+-||++|-.-+..|+||||||||++||..+...+-+.|++. ...||+++||-+. +.+.-..++|+.+.|.-..
T Consensus 707 GGQKaRValaeLal~~PDvlILDEPTNNLDIESIDALaEAIney---~GgVi~VsHDeRL-i~eT~C~LwVvE~Q~i~eI 782 (807)
T KOG0066|consen 707 GGQKARVALAELALGGPDVLILDEPTNNLDIESIDALAEAINEY---NGGVIMVSHDERL-IVETDCNLWVVENQGIDEI 782 (807)
T ss_pred CcchHHHHHHHHhcCCCCEEEecCCCCCcchhhHHHHHHHHHhc---cCcEEEEecccce-eeecCceEEEEccCChhhc
Confidence 99999999999999999999999999999999999999999885 4589999999764 5555567888877666566
Q ss_pred eCCCCCchhHHH
Q 000997 1051 AGPLGSKSCELI 1062 (1194)
Q Consensus 1051 ~g~~~~~~~~~~ 1062 (1194)
.|.......+++
T Consensus 783 dGdFeDYkkEVL 794 (807)
T KOG0066|consen 783 DGDFEDYKKEVL 794 (807)
T ss_pred cccHHHHHHHHH
Confidence 676654333443
No 213
>COG4988 CydD ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=6.1e-36 Score=347.03 Aligned_cols=200 Identities=30% Similarity=0.438 Sum_probs=166.4
Q ss_pred eeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCceeeEEEECCccCCCCC---CCceEEEEecCCCCCCCCC
Q 000997 149 TILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV---PPRTSAYVSQQDWQVAEMT 225 (1194)
Q Consensus 149 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~~---~~~~~~yv~Q~d~~~~~lT 225 (1194)
++++|+|++++||+.++|+|+||||||||+++|+|+++++ +|+|.+||.+..+.. +++.++||+|+|.+|+ .|
T Consensus 335 ~~l~~l~~t~~~g~~talvG~SGaGKSTLl~lL~G~~~~~---~G~I~vng~~l~~l~~~~~~k~i~~v~Q~p~lf~-gT 410 (559)
T COG4988 335 PALSDLNLTIKAGQLTALVGASGAGKSTLLNLLLGFLAPT---QGEIRVNGIDLRDLSPEAWRKQISWVSQNPYLFA-GT 410 (559)
T ss_pred cccCCceeEecCCcEEEEECCCCCCHHHHHHHHhCcCCCC---CceEEECCccccccCHHHHHhHeeeeCCCCcccc-cc
Confidence 6999999999999999999999999999999999999886 999999999987765 5789999999998666 59
Q ss_pred HHHHHHHhhhccCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhccCcchhHHHHHHHHHhCC------cccccccc
Q 000997 226 VRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGL------DTCADTLV 299 (1194)
Q Consensus 226 V~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~k~~~~~~~~~~~~~~~~l~~lgL------~~~~dt~v 299 (1194)
+||||.++... .. ++.+.++++.-|| +...||.+
T Consensus 411 ireNi~l~~~~----~s------------------------------------~e~i~~al~~a~l~~~v~~p~GLdt~i 450 (559)
T COG4988 411 IRENILLARPD----AS------------------------------------DEEIIAALDQAGLLEFVPKPDGLDTVI 450 (559)
T ss_pred HHHHhhccCCc----CC------------------------------------HHHHHHHHHHhcHHHhhcCCCcccchh
Confidence 99999986321 00 0112223333332 45779999
Q ss_pred cCccCCCCChhhhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEE
Q 000997 300 GDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVI 379 (1194)
Q Consensus 300 g~~~~~~LSGGqkqRvsia~al~~~~~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vi 379 (1194)
|+ ..++|||||+|||++|||++.+++++++||||++||.++...|.+.|.++++ ++|+++ ++|.. +...-+|+|+
T Consensus 451 ge-~G~~LSgGQ~QRlaLARAll~~~~l~llDEpTA~LD~etE~~i~~~l~~l~~--~ktvl~-itHrl-~~~~~~D~I~ 525 (559)
T COG4988 451 GE-GGAGLSGGQAQRLALARALLSPASLLLLDEPTAHLDAETEQIILQALQELAK--QKTVLV-ITHRL-EDAADADRIV 525 (559)
T ss_pred cc-CCCCCCHHHHHHHHHHHHhcCCCCEEEecCCccCCCHhHHHHHHHHHHHHHh--CCeEEE-EEcCh-HHHhcCCEEE
Confidence 96 4568999999999999999999999999999999999999999999999876 345554 55544 4556789999
Q ss_pred EEcCCeEEEecChhhHHH
Q 000997 380 LLSEGQIVYQGPRVSVLD 397 (1194)
Q Consensus 380 lL~~G~iv~~G~~~~~~~ 397 (1194)
+|++|+++++|.++++.+
T Consensus 526 vld~G~l~~~g~~~~L~~ 543 (559)
T COG4988 526 VLDNGRLVEQGTHEELSE 543 (559)
T ss_pred EecCCceeccCCHHHHhh
Confidence 999999999999998853
No 214
>cd03255 ABC_MJ0796_Lo1CDE_FtsE This family is comprised of MJ0796 ATP-binding cassette, macrolide-specific ABC-type efflux carrier (MacAB), and proteins involved in cell division (FtsE), and release of liporoteins from the cytoplasmic membrane (LolCDE). They are clustered together phylogenetically. MacAB is an exporter that confers resistance to macrolides, while the LolCDE system is not a transporter at all. An FtsE null mutants showed filamentous growth and appeared viable on high salt medium only, indicating a role for FtsE in cell division and/or salt transport. The LolCDE complex catalyses the release of lipoproteins from the cytoplasmic membrane prior to their targeting to the outer membrane.
Probab=100.00 E-value=9.4e-36 Score=324.46 Aligned_cols=195 Identities=25% Similarity=0.383 Sum_probs=162.6
Q ss_pred eeeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCceeeEEEECCccCCCCC-------CCceEEEEecCCCC
Q 000997 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV-------PPRTSAYVSQQDWQ 220 (1194)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~~-------~~~~~~yv~Q~d~~ 220 (1194)
+++|+|+|+++++|++++|+|||||||||||++|+|.+++. +|+|.++|.++.... .++.++|++|++.+
T Consensus 17 ~~il~~~s~~i~~G~~~~l~G~nGsGKSTLl~~i~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~~i~~~~q~~~~ 93 (218)
T cd03255 17 VQALKGVSLSIEKGEFVAIVGPSGSGKSTLLNILGGLDRPT---SGEVRVDGTDISKLSEKELAAFRRRHIGFVFQSFNL 93 (218)
T ss_pred eeEEeeeEEEEcCCCEEEEEcCCCCCHHHHHHHHhCCcCCC---ceeEEECCEehhhcchhHHHHHHhhcEEEEeecccc
Confidence 46999999999999999999999999999999999999876 999999998875432 13579999999998
Q ss_pred CCCCCHHHHHHHhhhccCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhccCcchhHHHHHHHHHhCCccccccccc
Q 000997 221 VAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVG 300 (1194)
Q Consensus 221 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~k~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg 300 (1194)
++.+||+||+.++....+... ......++.+++.+||++..++.+
T Consensus 94 ~~~~tv~e~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~- 138 (218)
T cd03255 94 LPDLTALENVELPLLLAGVPK----------------------------------KERRERAEELLERVGLGDRLNHYP- 138 (218)
T ss_pred CCCCcHHHHHHHHHhhcCCCH----------------------------------HHHHHHHHHHHHHcCCchhhhcCh-
Confidence 999999999988654322100 001224678899999987766655
Q ss_pred CccCCCCChhhhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEE
Q 000997 301 DEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVIL 380 (1194)
Q Consensus 301 ~~~~~~LSGGqkqRvsia~al~~~~~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vil 380 (1194)
+.|||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|+++++.. +++|+.++|..+++. .+|++++
T Consensus 139 ----~~LS~G~~qrv~la~al~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~-~~tii~~sH~~~~~~-~~d~v~~ 212 (218)
T cd03255 139 ----SELSGGQQQRVAIARALANDPKIILADEPTGNLDSETGKEVMELLRELNKEA-GTTIVVVTHDPELAE-YADRIIE 212 (218)
T ss_pred ----hhcCHHHHHHHHHHHHHccCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhc-CCeEEEEECCHHHHh-hhcEEEE
Confidence 4699999999999999999999999999999999999999999999987533 445666778887776 9999999
Q ss_pred EcCCeE
Q 000997 381 LSEGQI 386 (1194)
Q Consensus 381 L~~G~i 386 (1194)
|++|++
T Consensus 213 l~~G~i 218 (218)
T cd03255 213 LRDGKI 218 (218)
T ss_pred eeCCcC
Confidence 999974
No 215
>cd03298 ABC_ThiQ_thiamine_transporter ABC-type thiamine tranport system; part of the binding-protein-dependent transport system tbpA-thiPQ for thiamine and TPP. Probably responsible for the translocation of thiamine across the membrane. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=8.6e-36 Score=323.00 Aligned_cols=194 Identities=27% Similarity=0.375 Sum_probs=163.3
Q ss_pred eeeEEEeCCcEEEEEccCCCChHHHHhhhcCCCCCCeeEEEEEEcCccCCh-hcccceeeEeecCCCCCCCCcHHHHHHH
Q 000997 847 NVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ-ETFARISGYCEQNDIHSPGLTVLESLLF 925 (1194)
Q Consensus 847 ~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~-~~~~~~~gyv~Q~~~~~~~lTv~e~l~f 925 (1194)
|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++.. ...++.+||++|++.+++.+|++||+.+
T Consensus 16 ~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~gl~~--~~~G~i~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~tv~enl~~ 93 (211)
T cd03298 16 HFDLTFAQGEITAIVGPSGSGKSTLLNLIAGFET--PQSGRVLINGVDVTAAPPADRPVSMLFQENNLFAHLTVEQNVGL 93 (211)
T ss_pred ceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEEcCcCCHhHccEEEEecccccCCCCcHHHHHhc
Confidence 9999999999999999999999999999999876 468999999987643 1234679999999999999999999987
Q ss_pred HhhhcCCCcCcHHHHHHHHHHHHHHcCCCcccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHH
Q 000997 926 SAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSGLDARAAA 1005 (1194)
Q Consensus 926 ~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEPTsgLD~~~~~ 1005 (1194)
....+.. . ....++.++++++.+++.+..+..+ ..||||||||++||++|+.+|++|+|||||+|||+.++.
T Consensus 94 ~~~~~~~--~-~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrv~ia~al~~~p~llllDEP~~~LD~~~~~ 165 (211)
T cd03298 94 GLSPGLK--L-TAEDRQAIEVALARVGLAGLEKRLP-----GELSGGERQRVALARVLVRDKPVLLLDEPFAALDPALRA 165 (211)
T ss_pred ccccccC--c-cHHHHHHHHHHHHHcCCHHHHhCCc-----ccCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHH
Confidence 5432111 1 1233456788999999987766543 589999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHh-CCCEEEEEecCCcHHHHHhcCeEEEEccCcEEEEeC
Q 000997 1006 IVMRTVRNIVN-TGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAG 1052 (1194)
Q Consensus 1006 ~i~~~l~~l~~-~g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g 1052 (1194)
.+++.|+++++ .|+|||++||+++ ++.+.+|++++|.+ |+++..|
T Consensus 166 ~l~~~l~~~~~~~~~tii~~sH~~~-~~~~~~d~i~~l~~-G~i~~~~ 211 (211)
T cd03298 166 EMLDLVLDLHAETKMTVLMVTHQPE-DAKRLAQRVVFLDN-GRIAAQG 211 (211)
T ss_pred HHHHHHHHHHHhcCCEEEEEecCHH-HHHhhhCEEEEEEC-CEEeecC
Confidence 99999999975 4899999999976 46677999999984 7877653
No 216
>cd03301 ABC_MalK_N The N-terminal ATPase domain of the maltose transporter, MalK. ATP binding cassette (ABC) proteins function from bacteria to human, mediating the translocation of substances into and out of cells or organelles. ABC transporters contain two transmembrane-spanning domains (TMDs) or subunits and two nucleotide binding domains (NBDs) or subunits that couple transport to the hydrolysis of ATP. In the maltose transport system, the periplasmic maltose binding protein (MBP) stimulates the ATPase activity of the membrane-associated transporter, which consists of two transmembrane subunits, MalF and MalG, and two copies of the ATP binding subunit, MalK, and becomes tightly bound to the transporter in the catalytic transition state, ensuring that maltose is passed to the transporter as ATP is hydrolyzed.
Probab=100.00 E-value=1.2e-35 Score=322.31 Aligned_cols=199 Identities=31% Similarity=0.406 Sum_probs=167.9
Q ss_pred eeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCceeeEEEECCccCCCCCC-CceEEEEecCCCCCCCCCHH
Q 000997 149 TILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVP-PRTSAYVSQQDWQVAEMTVR 227 (1194)
Q Consensus 149 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lTV~ 227 (1194)
++|+|+|++|++|++++|+|||||||||||++|+|.+++. +|+|.++|.++..... ++.++|++|++.+++.+||+
T Consensus 14 ~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~---~G~v~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~tv~ 90 (213)
T cd03301 14 TALDDLNLDIADGEFVVLLGPSGCGKTTTLRMIAGLEEPT---SGRIYIGGRDVTDLPPKDRDIAMVFQNYALYPHMTVY 90 (213)
T ss_pred eeeeceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEECCcCCcccceEEEEecChhhccCCCHH
Confidence 5999999999999999999999999999999999998776 9999999988754322 35799999999888899999
Q ss_pred HHHHHhhhccCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhccCcchhHHHHHHHHHhCCcccccccccCccCCCC
Q 000997 228 ETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEMLKGI 307 (1194)
Q Consensus 228 E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~k~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~L 307 (1194)
||+.+.....+... .+....++.+++.+||++..+..++ .|
T Consensus 91 ~~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~~-----~L 131 (213)
T cd03301 91 DNIAFGLKLRKVPK----------------------------------DEIDERVREVAELLQIEHLLDRKPK-----QL 131 (213)
T ss_pred HHHHHHHHhcCCCH----------------------------------HHHHHHHHHHHHHcCCHHHHhCChh-----hC
Confidence 99988643321100 0012246778999999887776654 59
Q ss_pred ChhhhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEcCCeEE
Q 000997 308 SGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEGQIV 387 (1194)
Q Consensus 308 SGGqkqRvsia~al~~~~~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~~G~iv 387 (1194)
|||||||++||+||+.+|++++|||||+|||+.++..+.+.|+++++..+ ++|+.++|..+++.+++|+|++|++|+++
T Consensus 132 S~G~~qr~~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~-~tvi~~sH~~~~~~~~~d~i~~l~~g~~~ 210 (213)
T cd03301 132 SGGQRQRVALGRAIVREPKVFLMDEPLSNLDAKLRVQMRAELKRLQQRLG-TTTIYVTHDQVEAMTMADRIAVMNDGQIQ 210 (213)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcC-CEEEEEeCCHHHHHHhcCeEEEEECCEEE
Confidence 99999999999999999999999999999999999999999999875434 45666778888999999999999999999
Q ss_pred Eec
Q 000997 388 YQG 390 (1194)
Q Consensus 388 ~~G 390 (1194)
+.|
T Consensus 211 ~~g 213 (213)
T cd03301 211 QIG 213 (213)
T ss_pred ecC
Confidence 876
No 217
>PRK13635 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.7e-35 Score=333.40 Aligned_cols=201 Identities=27% Similarity=0.328 Sum_probs=171.3
Q ss_pred eEEeeeeeEEEeCCcEEEEEccCCCChHHHHhhhcCCCCCCeeEEEEEEcCccCCh---hcccceeeEeecCCC-CCCCC
Q 000997 842 LQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ---ETFARISGYCEQNDI-HSPGL 917 (1194)
Q Consensus 842 ~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~---~~~~~~~gyv~Q~~~-~~~~l 917 (1194)
+.+|+|||++|++||++||+||||||||||+++|+|..+ +.+|+|.++|.++.. ...++.+||++|++. .++..
T Consensus 20 ~~~l~~vsl~i~~Ge~~~i~G~nGaGKSTLl~~i~G~~~--p~~G~i~~~g~~i~~~~~~~~~~~i~~~~q~~~~~~~~~ 97 (279)
T PRK13635 20 TYALKDVSFSVYEGEWVAIVGHNGSGKSTLAKLLNGLLL--PEAGTITVGGMVLSEETVWDVRRQVGMVFQNPDNQFVGA 97 (279)
T ss_pred ccceeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCC--CCCcEEEECCEECCcCcHHHHhhheEEEEeCHHHhcccc
Confidence 469999999999999999999999999999999999876 468999999987643 234567999999974 56678
Q ss_pred cHHHHHHHHhhhcCCCcCcHHHHHHHHHHHHHHcCCCcccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCC
Q 000997 918 TVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTS 997 (1194)
Q Consensus 918 Tv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEPTs 997 (1194)
||.||+.+..... .....+..+.++++++.++|.+..+..+ ..||||||||++|||+|+.+|+||||||||+
T Consensus 98 tv~enl~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----~~LS~G~~qrv~laral~~~p~lllLDEPt~ 169 (279)
T PRK13635 98 TVQDDVAFGLENI---GVPREEMVERVDQALRQVGMEDFLNREP-----HRLSGGQKQRVAIAGVLALQPDIIILDEATS 169 (279)
T ss_pred cHHHHHhhhHhhC---CCCHHHHHHHHHHHHHHcCChhhhhCCc-----ccCCHHHHHHHHHHHHHHcCCCEEEEeCCcc
Confidence 9999998865432 1233444567889999999987776653 5799999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCeEEEEccCcEEEEeCCCC
Q 000997 998 GLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLG 1055 (1194)
Q Consensus 998 gLD~~~~~~i~~~l~~l~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~~ 1055 (1194)
|||+.++..+++.|++++++ |+|||+++|+++. + ..+|++++|. +|++++.|+..
T Consensus 170 gLD~~~~~~l~~~l~~l~~~~~~tilivsH~~~~-~-~~~d~i~~l~-~G~i~~~g~~~ 225 (279)
T PRK13635 170 MLDPRGRREVLETVRQLKEQKGITVLSITHDLDE-A-AQADRVIVMN-KGEILEEGTPE 225 (279)
T ss_pred cCCHHHHHHHHHHHHHHHHcCCCEEEEEecCHHH-H-HcCCEEEEEE-CCEEEEECCHH
Confidence 99999999999999999876 8999999999763 4 4699999998 57899999753
No 218
>cd03218 ABC_YhbG The ABC transporters belonging to the YhbG family are similar to members of the Mj1267_LivG family, which is involved in the transport of branched-chain amino acids. The genes yhbG and yhbN are located in a single operon and may function together in cell envelope during biogenesis. YhbG is the putative ATP-binding cassette component and YhbN is the putative periplasmic-binding protein. Depletion of each gene product leads to growth arrest, irreversible cell damage and loss of viability in E. coli. The YhbG homolog (NtrA) is essential in Rhizobium meliloti, a symbiotic nitrogen-fixing bacterium.
Probab=100.00 E-value=1.2e-35 Score=326.74 Aligned_cols=204 Identities=21% Similarity=0.339 Sum_probs=171.7
Q ss_pred eeeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCceeeEEEECCccCCCCCC----CceEEEEecCCCCCCC
Q 000997 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVP----PRTSAYVSQQDWQVAE 223 (1194)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~~~----~~~~~yv~Q~d~~~~~ 223 (1194)
+.+|+|+|+++++|++++|+|||||||||||++|+|.++|. +|+|.++|.++..... ++.++|++|++.+++.
T Consensus 13 ~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~ 89 (232)
T cd03218 13 RKVVNGVSLSVKQGEIVGLLGPNGAGKTTTFYMIVGLVKPD---SGKILLDGQDITKLPMHKRARLGIGYLPQEASIFRK 89 (232)
T ss_pred EEeeccceeEecCCcEEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEecccCCHhHHHhccEEEecCCcccccc
Confidence 46999999999999999999999999999999999998876 9999999987654321 2469999999998999
Q ss_pred CCHHHHHHHhhhccCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhccCcchhHHHHHHHHHhCCcccccccccCcc
Q 000997 224 MTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEM 303 (1194)
Q Consensus 224 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~k~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~ 303 (1194)
+||+||+.+.....+... ......++.+++.+||++..++.+
T Consensus 90 ~tv~~~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~---- 131 (232)
T cd03218 90 LTVEENILAVLEIRGLSK----------------------------------KEREEKLEELLEEFHITHLRKSKA---- 131 (232)
T ss_pred CcHHHHHHHHHHhcCCCH----------------------------------HHHHHHHHHHHHHcCChhhhhCCh----
Confidence 999999987543221000 001224678899999987776655
Q ss_pred CCCCChhhhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEcC
Q 000997 304 LKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSE 383 (1194)
Q Consensus 304 ~~~LSGGqkqRvsia~al~~~~~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~~ 383 (1194)
..|||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|+++++ . +++|+.++|+.+++.+++|+|++|++
T Consensus 132 -~~LS~G~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~-~-~~tii~~sH~~~~~~~~~d~i~~l~~ 208 (232)
T cd03218 132 -SSLSGGERRRVEIARALATNPKFLLLDEPFAGVDPIAVQDIQKIIKILKD-R-GIGVLITDHNVRETLSITDRAYIIYE 208 (232)
T ss_pred -hhCCHHHHHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHH-C-CCEEEEEeCCHHHHHHhCCEEEEEEC
Confidence 46999999999999999999999999999999999999999999998875 2 45566688888899999999999999
Q ss_pred CeEEEecChhhH
Q 000997 384 GQIVYQGPRVSV 395 (1194)
Q Consensus 384 G~iv~~G~~~~~ 395 (1194)
|++++.|+.+++
T Consensus 209 G~i~~~~~~~~~ 220 (232)
T cd03218 209 GKVLAEGTPEEI 220 (232)
T ss_pred CeEEEEeCHHHh
Confidence 999999988765
No 219
>cd03233 ABC_PDR_domain1 The pleiotropic drug resistance (PDR) family of ATP-binding cassette (ABC) transporters. PDR is a well-described phenomenon occurring in fungi and shares several similarities with processes in bacteria and higher eukaryotes. This PDR subfamily represents domain I of its (ABC-IM)2 organization. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds including sugars, ions, peptides, and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2e-35 Score=317.17 Aligned_cols=196 Identities=31% Similarity=0.568 Sum_probs=162.3
Q ss_pred eeEeecceeeeecccccccccccccceEEeeeeeEEEeCCcEEEEEccCCCChHHHHhhhcCCCCCC-eeEEEEEEcCcc
Q 000997 816 SMAFGNINYFVDVPVELKQEGVLEDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGG-IIEGDIYISGYP 894 (1194)
Q Consensus 816 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~-~~~G~i~i~g~~ 894 (1194)
.++|+|++|.++.+ .+++.+|+|+||++++||++||+||||||||||+++|+|..++. +.+|+|.++|.+
T Consensus 3 ~~~~~~~~~~~~~~---------~~~~~il~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~~~~G~i~i~g~~ 73 (202)
T cd03233 3 TLSWRNISFTTGKG---------RSKIPILKDFSGVVKPGEMVLVLGRPGSGCSTLLKALANRTEGNVSVEGDIHYNGIP 73 (202)
T ss_pred eEEEEccEEEeccC---------CCCceeeeeEEEEECCCcEEEEECCCCCCHHHHHHHhcccCCCCCCcceEEEECCEE
Confidence 57889999887432 23567999999999999999999999999999999999986532 568999999987
Q ss_pred CCh--hcccceeeEeecCCCCCCCCcHHHHHHHHhhhcCCCcCcHHHHHHHHHHHHHHcCCCcccCCcccCCCCCCCCHH
Q 000997 895 KRQ--ETFARISGYCEQNDIHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTE 972 (1194)
Q Consensus 895 ~~~--~~~~~~~gyv~Q~~~~~~~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgG 972 (1194)
+.. ...++.++|++|++.+++.+||+||+.+.+... .+. .+..||+|
T Consensus 74 ~~~~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~--------------------------~~~-----~~~~LS~G 122 (202)
T cd03233 74 YKEFAEKYPGEIIYVSEEDVHFPTLTVRETLDFALRCK--------------------------GNE-----FVRGISGG 122 (202)
T ss_pred CccchhhhcceEEEEecccccCCCCcHHHHHhhhhhhc--------------------------ccc-----chhhCCHH
Confidence 643 235667999999999999999999998753210 122 13579999
Q ss_pred HHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCeEEEEccCcEEEEe
Q 000997 973 QRKRLTIAVELVANPSIVFMDEPTSGLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYA 1051 (1194)
Q Consensus 973 qrqrl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~l~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~ 1051 (1194)
||||++||+||+.+|++|+|||||+|||+.++..+++.|++++++ +.|+|+++|+...++.+.+|++++|++ |++++.
T Consensus 123 e~qrl~laral~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~~t~ii~~~h~~~~~~~~~d~i~~l~~-G~i~~~ 201 (202)
T cd03233 123 ERKRVSIAEALVSRASVLCWDNSTRGLDSSTALEILKCIRTMADVLKTTTFVSLYQASDEIYDLFDKVLVLYE-GRQIYY 201 (202)
T ss_pred HHHHHHHHHHHhhCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhCCCEEEEEEcCCHHHHHHhCCeEEEEEC-CEEEec
Confidence 999999999999999999999999999999999999999999765 678777766643367788999999985 788765
Q ss_pred C
Q 000997 1052 G 1052 (1194)
Q Consensus 1052 g 1052 (1194)
|
T Consensus 202 g 202 (202)
T cd03233 202 G 202 (202)
T ss_pred C
Confidence 4
No 220
>PRK11231 fecE iron-dicitrate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=9.9e-36 Score=331.90 Aligned_cols=207 Identities=26% Similarity=0.387 Sum_probs=171.7
Q ss_pred cceEEeeeeeEEEeCCcEEEEEccCCCChHHHHhhhcCCCCCCeeEEEEEEcCccCCh---hcccceeeEeecCCCCCCC
Q 000997 840 DRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ---ETFARISGYCEQNDIHSPG 916 (1194)
Q Consensus 840 ~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~---~~~~~~~gyv~Q~~~~~~~ 916 (1194)
+++.+|+||||++++|++++|+|+||||||||+++|+|..+ +.+|+|.++|.++.. ..+++.++|++|+..+++.
T Consensus 13 ~~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~~ 90 (255)
T PRK11231 13 GTKRILNDLSLSLPTGKITALIGPNGCGKSTLLKCFARLLT--PQSGTVFLGDKPISMLSSRQLARRLALLPQHHLTPEG 90 (255)
T ss_pred CCEEEEeeeeeEEcCCcEEEEECCCCCCHHHHHHHHhCCcC--CCCcEEEECCEEhHHCCHHHHhhheEEecccCCCCCC
Confidence 34679999999999999999999999999999999999865 468999999987532 2345679999999888888
Q ss_pred CcHHHHHHHHhhhcCC-CcCcHHHHHHHHHHHHHHcCCCcccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCC
Q 000997 917 LTVLESLLFSAWLRLP-SEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEP 995 (1194)
Q Consensus 917 lTv~e~l~f~~~lr~~-~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEP 995 (1194)
+|+.||+.++...... .........+.++++++.+++.+..+... ..||||||||++||+||+.+|++|+||||
T Consensus 91 ~tv~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrv~laral~~~p~llllDEP 165 (255)
T PRK11231 91 ITVRELVAYGRSPWLSLWGRLSAEDNARVNQAMEQTRINHLADRRL-----TDLSGGQRQRAFLAMVLAQDTPVVLLDEP 165 (255)
T ss_pred ccHHHHHHhccchhhhhccCCCHHHHHHHHHHHHHcCCHHHHcCCc-----ccCCHHHHHHHHHHHHHhcCCCEEEEcCC
Confidence 9999999875311000 00111223456788999999987666543 57999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCeEEEEccCcEEEEeCCCC
Q 000997 996 TSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLG 1055 (1194)
Q Consensus 996 TsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~~ 1055 (1194)
|+|||+.++..+.+.|++++++|+|||++||+++ ++.+.+|++++|++ |+++..|+..
T Consensus 166 ~~~LD~~~~~~l~~~l~~l~~~~~tiii~tH~~~-~~~~~~d~i~~l~~-G~i~~~~~~~ 223 (255)
T PRK11231 166 TTYLDINHQVELMRLMRELNTQGKTVVTVLHDLN-QASRYCDHLVVLAN-GHVMAQGTPE 223 (255)
T ss_pred cccCCHHHHHHHHHHHHHHHHCCCEEEEEECCHH-HHHHhcCEEEEEEC-CeEEEEcCHH
Confidence 9999999999999999999777999999999986 57788999999984 7898888754
No 221
>cd03258 ABC_MetN_methionine_transporter MetN (also known as YusC) is an ABC-type transporter encoded by metN of the metNPQ operon in Bacillus subtilis that is involved in methionine transport. Other members of this system include the MetP permease and the MetQ substrate binding protein. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.1e-35 Score=327.23 Aligned_cols=204 Identities=25% Similarity=0.369 Sum_probs=172.2
Q ss_pred eeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCceeeEEEECCccCCCCCC------CceEEEEecCCCCCC
Q 000997 149 TILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVP------PRTSAYVSQQDWQVA 222 (1194)
Q Consensus 149 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~~~------~~~~~yv~Q~d~~~~ 222 (1194)
++|+|+|++|++|++++|+||||||||||+++|+|.+++. +|+|.++|.++..... ++.++|++|++.+++
T Consensus 19 ~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~i~~~~q~~~~~~ 95 (233)
T cd03258 19 TALKDVSLSVPKGEIFGIIGRSGAGKSTLIRCINGLERPT---SGSVLVDGTDLTLLSGKELRKARRRIGMIFQHFNLLS 95 (233)
T ss_pred eeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEEcccCCHHHHHHHHhheEEEccCcccCC
Confidence 6999999999999999999999999999999999999876 9999999998754321 457999999999899
Q ss_pred CCCHHHHHHHhhhccCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhccCcchhHHHHHHHHHhCCcccccccccCc
Q 000997 223 EMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDE 302 (1194)
Q Consensus 223 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~k~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~ 302 (1194)
.+||+||+.+.....+... ......++.+++.+||++..+..+
T Consensus 96 ~~t~~e~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~--- 138 (233)
T cd03258 96 SRTVFENVALPLEIAGVPK----------------------------------AEIEERVLELLELVGLEDKADAYP--- 138 (233)
T ss_pred CCcHHHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHCCChhhhhcCh---
Confidence 9999999988643221100 001123677899999987776655
Q ss_pred cCCCCChhhhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEc
Q 000997 303 MLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLS 382 (1194)
Q Consensus 303 ~~~~LSGGqkqRvsia~al~~~~~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~ 382 (1194)
..|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++++.. +++|+.++|+.+++.+++|++++|+
T Consensus 139 --~~LS~G~~qrv~la~al~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~-~~tvii~sH~~~~~~~~~d~i~~l~ 215 (233)
T cd03258 139 --AQLSGGQKQRVGIARALANNPKVLLCDEATSALDPETTQSILALLRDINREL-GLTIVLITHEMEVVKRICDRVAVME 215 (233)
T ss_pred --hhCCHHHHHHHHHHHHHhcCCCEEEecCCCCcCCHHHHHHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHhCCEEEEEE
Confidence 4699999999999999999999999999999999999999999999987533 4556667888889999999999999
Q ss_pred CCeEEEecChhhH
Q 000997 383 EGQIVYQGPRVSV 395 (1194)
Q Consensus 383 ~G~iv~~G~~~~~ 395 (1194)
+|++++.|+.+++
T Consensus 216 ~G~i~~~~~~~~~ 228 (233)
T cd03258 216 KGEVVEEGTVEEV 228 (233)
T ss_pred CCEEEEecCHHHH
Confidence 9999999987765
No 222
>TIGR03522 GldA_ABC_ATP gliding motility-associated ABC transporter ATP-binding subunit GldA. Members of this protein family are exclusive to the Bacteroidetes phylum (previously Cytophaga-Flavobacteria-Bacteroides). GldA is an ABC transporter ATP-binding protein (pfam00005) linked to a type of rapid surface gliding motility found in certain Bacteroidetes, such as Flavobacterium johnsoniae and Cytophaga hutchinsonii. Knockouts of GldA abolish the gliding phenotype. Gliding motility appears closely linked to chitin utilization in the model species Flavobacterium johnsoniae. Bacteroidetes with members of this protein family appear to have all of the genes associated with gliding motility.
Probab=100.00 E-value=9.9e-36 Score=338.98 Aligned_cols=205 Identities=26% Similarity=0.379 Sum_probs=176.6
Q ss_pred eeeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCceeeEEEECCccCCCCC--CCceEEEEecCCCCCCCCC
Q 000997 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV--PPRTSAYVSQQDWQVAEMT 225 (1194)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~~--~~~~~~yv~Q~d~~~~~lT 225 (1194)
+.+|+|+|+++++|++++|+|||||||||||++|+|.++++ +|+|.++|.++.... .++.++|++|++.+++.+|
T Consensus 15 ~~~l~~is~~i~~Gei~~l~G~NGaGKTTLl~~l~Gl~~~~---~G~i~i~g~~~~~~~~~~~~~ig~~~q~~~l~~~~t 91 (301)
T TIGR03522 15 QNALDEVSFEAQKGRIVGFLGPNGAGKSTTMKIITGYLPPD---SGSVQVCGEDVLQNPKEVQRNIGYLPEHNPLYLDMY 91 (301)
T ss_pred EEEEEEeEEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEEcccChHHHHhceEEecCCCCCCCCCc
Confidence 46999999999999999999999999999999999998876 999999998875422 2467999999999999999
Q ss_pred HHHHHHHhhhccCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhccCcchhHHHHHHHHHhCCcccccccccCccCC
Q 000997 226 VRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEMLK 305 (1194)
Q Consensus 226 V~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~k~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~ 305 (1194)
|.||+.|.++..+... .+....++.+++.+||.+..++.++
T Consensus 92 v~e~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~gl~~~~~~~~~----- 132 (301)
T TIGR03522 92 VREYLQFIAGIYGMKG----------------------------------QLLKQRVEEMIELVGLRPEQHKKIG----- 132 (301)
T ss_pred HHHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHCCCchHhcCchh-----
Confidence 9999988665432110 0012246788999999988887664
Q ss_pred CCChhhhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEcCCe
Q 000997 306 GISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEGQ 385 (1194)
Q Consensus 306 ~LSGGqkqRvsia~al~~~~~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~~G~ 385 (1194)
.|||||||||+||+||+++|++|+|||||+|||+.++..+++.|++++. + ++|+.++|..+++.++||+|++|++|+
T Consensus 133 ~LS~G~~qrv~la~al~~~p~lliLDEPt~gLD~~~~~~l~~~l~~~~~--~-~tiii~sH~l~~~~~~~d~i~~l~~G~ 209 (301)
T TIGR03522 133 QLSKGYRQRVGLAQALIHDPKVLILDEPTTGLDPNQLVEIRNVIKNIGK--D-KTIILSTHIMQEVEAICDRVIIINKGK 209 (301)
T ss_pred hCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHhcC--C-CEEEEEcCCHHHHHHhCCEEEEEECCE
Confidence 5999999999999999999999999999999999999999999998853 4 567778899999999999999999999
Q ss_pred EEEecChhhHHH
Q 000997 386 IVYQGPRVSVLD 397 (1194)
Q Consensus 386 iv~~G~~~~~~~ 397 (1194)
+++.|+.+++..
T Consensus 210 i~~~g~~~~~~~ 221 (301)
T TIGR03522 210 IVADKKLDELSA 221 (301)
T ss_pred EEEeCCHHHHHH
Confidence 999999988754
No 223
>PRK10575 iron-hydroxamate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1e-35 Score=333.40 Aligned_cols=206 Identities=29% Similarity=0.412 Sum_probs=170.7
Q ss_pred ceEEeeeeeEEEeCCcEEEEEccCCCChHHHHhhhcCCCCCCeeEEEEEEcCccCC---hhcccceeeEeecCCCCCCCC
Q 000997 841 RLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKR---QETFARISGYCEQNDIHSPGL 917 (1194)
Q Consensus 841 ~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~---~~~~~~~~gyv~Q~~~~~~~l 917 (1194)
++.+|+|+||++++||++||+||||||||||+++|+|..+ +.+|+|.++|.++. ...+++.++|++|+..+++.+
T Consensus 23 ~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~~~~~~ 100 (265)
T PRK10575 23 GRTLLHPLSLTFPAGKVTGLIGHNGSGKSTLLKMLGRHQP--PSEGEILLDAQPLESWSSKAFARKVAYLPQQLPAAEGM 100 (265)
T ss_pred CEEEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHcCCCC--CCCCEEEECCEehhhCCHHHHhhheEEeccCCCCCCCc
Confidence 4579999999999999999999999999999999999876 46899999998653 233456799999998888899
Q ss_pred cHHHHHHHHhhhcCC-CcCcHHHHHHHHHHHHHHcCCCcccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCC
Q 000997 918 TVLESLLFSAWLRLP-SEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPT 996 (1194)
Q Consensus 918 Tv~e~l~f~~~lr~~-~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEPT 996 (1194)
|+.||+.+....... .........+.++++++.+++.+..+..+ ..|||||||||+||++|+.+|+||||||||
T Consensus 101 tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSgG~~qrv~laral~~~p~lllLDEPt 175 (265)
T PRK10575 101 TVRELVAIGRYPWHGALGRFGAADREKVEEAISLVGLKPLAHRLV-----DSLSGGERQRAWIAMLVAQDSRCLLLDEPT 175 (265)
T ss_pred cHHHHHHhCcccccccccCCCHHHHHHHHHHHHHcCCHHHhcCCc-----ccCCHHHHHHHHHHHHHhcCCCEEEEcCCc
Confidence 999999875321110 00111223456788999999977666543 579999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCeEEEEccCcEEEEeCCCC
Q 000997 997 SGLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLG 1055 (1194)
Q Consensus 997 sgLD~~~~~~i~~~l~~l~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~~ 1055 (1194)
+|||+.++..+++.|++++++ |.|||++||+++ ++.+.+|++++|. +|+++..|+..
T Consensus 176 ~~LD~~~~~~~~~~l~~l~~~~~~tiii~sH~~~-~i~~~~d~i~~l~-~G~i~~~~~~~ 233 (265)
T PRK10575 176 SALDIAHQVDVLALVHRLSQERGLTVIAVLHDIN-MAARYCDYLVALR-GGEMIAQGTPA 233 (265)
T ss_pred ccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEE-CCeEEEecCHH
Confidence 999999999999999999765 899999999986 5668899999998 57899888753
No 224
>PRK13652 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.2e-35 Score=332.56 Aligned_cols=201 Identities=25% Similarity=0.358 Sum_probs=170.6
Q ss_pred eEEeeeeeEEEeCCcEEEEEccCCCChHHHHhhhcCCCCCCeeEEEEEEcCccCCh---hcccceeeEeecCCC-CCCCC
Q 000997 842 LQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ---ETFARISGYCEQNDI-HSPGL 917 (1194)
Q Consensus 842 ~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~---~~~~~~~gyv~Q~~~-~~~~l 917 (1194)
..+|+||||++++||++||+|+||||||||+++|+|..+ +.+|+|.++|.++.. ..+++.+|||+|++. .+...
T Consensus 17 ~~~l~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~~~~~~~ 94 (277)
T PRK13652 17 KEALNNINFIAPRNSRIAVIGPNGAGKSTLFRHFNGILK--PTSGSVLIRGEPITKENIREVRKFVGLVFQNPDDQIFSP 94 (277)
T ss_pred CceeeEeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCceEEEECCEECCcCCHHHHHhheEEEecCcccccccc
Confidence 359999999999999999999999999999999999876 568999999987642 234567899999974 33467
Q ss_pred cHHHHHHHHhhhcCCCcCcHHHHHHHHHHHHHHcCCCcccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCC
Q 000997 918 TVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTS 997 (1194)
Q Consensus 918 Tv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEPTs 997 (1194)
||.||+.+..... ....+...+.++++++.+++.+..+..+ ..||||||||++|||||+.+|++|+|||||+
T Consensus 95 tv~~~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~Gq~qrl~laraL~~~p~llilDEPt~ 166 (277)
T PRK13652 95 TVEQDIAFGPINL---GLDEETVAHRVSSALHMLGLEELRDRVP-----HHLSGGEKKRVAIAGVIAMEPQVLVLDEPTA 166 (277)
T ss_pred cHHHHHHhHHHHc---CCCHHHHHHHHHHHHHHCCChhHhcCCc-----ccCCHHHHHHHHHHHHHHcCCCEEEEeCCcc
Confidence 9999998765322 2233444556789999999987766653 5899999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCeEEEEccCcEEEEeCCC
Q 000997 998 GLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1194)
Q Consensus 998 gLD~~~~~~i~~~l~~l~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~ 1054 (1194)
|||+.++..+.+.|+++.++ |.|||++||+++ ++.+.||++++|++ |++++.|+.
T Consensus 167 gLD~~~~~~l~~~l~~l~~~~g~tvli~tH~~~-~~~~~~drv~~l~~-G~i~~~g~~ 222 (277)
T PRK13652 167 GLDPQGVKELIDFLNDLPETYGMTVIFSTHQLD-LVPEMADYIYVMDK-GRIVAYGTV 222 (277)
T ss_pred cCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHH-HHHHhCCEEEEEEC-CeEEEECCH
Confidence 99999999999999999765 899999999986 56788999999985 789999875
No 225
>PRK14273 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.4e-35 Score=328.76 Aligned_cols=202 Identities=23% Similarity=0.275 Sum_probs=165.9
Q ss_pred eEEeeeeeEEEeCCcEEEEEccCCCChHHHHhhhcCCCCCC---eeEEEEEEcCccCCh-----hcccceeeEeecCCCC
Q 000997 842 LQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGG---IIEGDIYISGYPKRQ-----ETFARISGYCEQNDIH 913 (1194)
Q Consensus 842 ~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~---~~~G~i~i~g~~~~~-----~~~~~~~gyv~Q~~~~ 913 (1194)
+.+|+||||++++||+++|+|+||||||||+++|+|..++. +.+|+|.++|.++.. ..+++.+||++|++.+
T Consensus 20 ~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~i~~v~q~~~~ 99 (254)
T PRK14273 20 FKALNNINIKILKNSITALIGPSGCGKSTFLRTLNRMNDLVEGIKIEGNVIYEGKNIYSNNFDILELRRKIGMVFQTPNP 99 (254)
T ss_pred ceeecceeeEEcCCCEEEEECCCCCCHHHHHHHHhccccCCcCCCCceEEEECCEecccccccHHHHhhceEEEeecccc
Confidence 46999999999999999999999999999999999986531 248999999987531 2346679999999887
Q ss_pred CCCCcHHHHHHHHhhhcCCCcCcHHHHHHHHHHHHHHcCCCc----ccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCE
Q 000997 914 SPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTS----LSGALIGLPGINGLSTEQRKRLTIAVELVANPSI 989 (1194)
Q Consensus 914 ~~~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~----~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~i 989 (1194)
++ +||+||+.|....... .......+.++++++.+++.+ ..+. .+..||||||||++|||+|+.+|++
T Consensus 100 ~~-~tv~eni~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~l~~~~~~-----~~~~LSgG~~qrv~laral~~~p~l 171 (254)
T PRK14273 100 FL-MSIYDNISYGPKIHGT--KDKKKLDEIVEQSLKKSALWNEVKDKLNT-----NALSLSGGQQQRLCIARTLAIEPNV 171 (254)
T ss_pred cc-CcHHHHHHHHHHhcCC--CCHHHHHHHHHHHHHHhCCchhhHHHHhC-----CcccCCHHHHHHHHHHHHHHcCCCE
Confidence 74 8999999886543211 122333456788888888732 2333 2468999999999999999999999
Q ss_pred EEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCeEEEEccCcEEEEeCCC
Q 000997 990 VFMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1194)
Q Consensus 990 llLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~ 1054 (1194)
|+|||||+|||+.++..+++.|++++ ++.|||+++|+++ .+.+.+|++++|+ +|+++..|+.
T Consensus 172 llLDEPt~~LD~~~~~~l~~~l~~~~-~~~tvii~sH~~~-~~~~~~d~i~~l~-~G~i~~~g~~ 233 (254)
T PRK14273 172 ILMDEPTSALDPISTGKIEELIINLK-ESYTIIIVTHNMQ-QAGRISDRTAFFL-NGCIEEESST 233 (254)
T ss_pred EEEeCCCcccCHHHHHHHHHHHHHHh-cCCEEEEEeCCHH-HHHHhCCEEEEEE-CCEEEEeCCH
Confidence 99999999999999999999999996 4799999999986 4667899999998 5799988874
No 226
>PRK11629 lolD lipoprotein transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.1e-35 Score=323.51 Aligned_cols=201 Identities=20% Similarity=0.305 Sum_probs=166.9
Q ss_pred eeeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCceeeEEEECCccCCCCCC-------CceEEEEecCCCC
Q 000997 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVP-------PRTSAYVSQQDWQ 220 (1194)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~~~-------~~~~~yv~Q~d~~ 220 (1194)
.++|+|+|++|++|++++|+|||||||||||++|+|.+++. +|+|+++|.++..... ++.++|++|++.+
T Consensus 22 ~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~i~~~~~~~~~~~~~~~i~~v~q~~~~ 98 (233)
T PRK11629 22 TDVLHNVSFSIGEGEMMAIVGSSGSGKSTLLHLLGGLDTPT---SGDVIFNGQPMSKLSSAAKAELRNQKLGFIYQFHHL 98 (233)
T ss_pred eeeEEeeEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCCCC---ceEEEECCEEcCcCCHHHHHHHHhccEEEEecCccc
Confidence 46999999999999999999999999999999999998775 9999999998765432 2569999999988
Q ss_pred CCCCCHHHHHHHhhhccCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhccCcchhHHHHHHHHHhCCccccccccc
Q 000997 221 VAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVG 300 (1194)
Q Consensus 221 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~k~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg 300 (1194)
++.+||+||+.+.....+... .+.+.+++++++.+||++..++.+
T Consensus 99 ~~~~tv~e~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~gl~~~~~~~~- 143 (233)
T PRK11629 99 LPDFTALENVAMPLLIGKKKP----------------------------------AEINSRALEMLAAVGLEHRANHRP- 143 (233)
T ss_pred CCCCCHHHHHHHHHHhcCCCH----------------------------------HHHHHHHHHHHHHcCCchhhhCCh-
Confidence 999999999988643221000 001224678899999987766654
Q ss_pred CccCCCCChhhhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEE
Q 000997 301 DEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVIL 380 (1194)
Q Consensus 301 ~~~~~~LSGGqkqRvsia~al~~~~~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vil 380 (1194)
..|||||||||+||+|++.+|++|+|||||+|||+.++..+.+.|+++++.. +++|+.++|+.+++.. +|++++
T Consensus 144 ----~~LSgG~~qrl~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~-g~tvii~sH~~~~~~~-~~~~~~ 217 (233)
T PRK11629 144 ----SELSGGERQRVAIARALVNNPRLVLADEPTGNLDARNADSIFQLLGELNRLQ-GTAFLVVTHDLQLAKR-MSRQLE 217 (233)
T ss_pred ----hhCCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhC-CCEEEEEeCCHHHHHh-hCEEEE
Confidence 4699999999999999999999999999999999999999999999886533 4556667788888766 589999
Q ss_pred EcCCeEEEecCh
Q 000997 381 LSEGQIVYQGPR 392 (1194)
Q Consensus 381 L~~G~iv~~G~~ 392 (1194)
|++|++++.|+.
T Consensus 218 l~~G~i~~~~~~ 229 (233)
T PRK11629 218 MRDGRLTAELSL 229 (233)
T ss_pred EECCEEEEEecc
Confidence 999999998864
No 227
>PRK10253 iron-enterobactin transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.7e-35 Score=331.67 Aligned_cols=206 Identities=24% Similarity=0.347 Sum_probs=171.4
Q ss_pred ceEEeeeeeEEEeCCcEEEEEccCCCChHHHHhhhcCCCCCCeeEEEEEEcCccCCh---hcccceeeEeecCCCCCCCC
Q 000997 841 RLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ---ETFARISGYCEQNDIHSPGL 917 (1194)
Q Consensus 841 ~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~---~~~~~~~gyv~Q~~~~~~~l 917 (1194)
++.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++.. ..+++.++|++|++.+++..
T Consensus 19 ~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~--~~~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~~~~~~ 96 (265)
T PRK10253 19 KYTVAENLTVEIPDGHFTAIIGPNGCGKSTLLRTLSRLMT--PAHGHVWLDGEHIQHYASKEVARRIGLLAQNATTPGDI 96 (265)
T ss_pred CEEEeeecceEECCCCEEEEECCCCCCHHHHHHHHcCCCC--CCCcEEEECCEEhhhCCHHHHhhheEEeeccCcCCCCC
Confidence 4579999999999999999999999999999999999876 468999999987532 23456799999999888889
Q ss_pred cHHHHHHHHhhhcCC-CcCcHHHHHHHHHHHHHHcCCCcccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCC
Q 000997 918 TVLESLLFSAWLRLP-SEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPT 996 (1194)
Q Consensus 918 Tv~e~l~f~~~lr~~-~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEPT 996 (1194)
|++|++.+......+ .....+...+.++++++.+++.+..+.. +..||||||||++|||||+.+|++|+|||||
T Consensus 97 tv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~Gq~qrv~laral~~~p~llllDEPt 171 (265)
T PRK10253 97 TVQELVARGRYPHQPLFTRWRKEDEEAVTKAMQATGITHLADQS-----VDTLSGGQRQRAWIAMVLAQETAIMLLDEPT 171 (265)
T ss_pred cHHHHHHhCcccccccccCCCHHHHHHHHHHHHHcCCHHHhcCC-----cccCChHHHHHHHHHHHHhcCCCEEEEeCcc
Confidence 999999875211100 0001122345678899999998766654 3589999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCeEEEEccCcEEEEeCCCC
Q 000997 997 SGLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLG 1055 (1194)
Q Consensus 997 sgLD~~~~~~i~~~l~~l~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~~ 1055 (1194)
+|||+.++..+.+.|+++.++ |.|||+++|++. .+.+.+|++++|. +|++++.|+..
T Consensus 172 ~gLD~~~~~~l~~~L~~l~~~~~~tiii~tH~~~-~~~~~~d~i~~l~-~G~i~~~g~~~ 229 (265)
T PRK10253 172 TWLDISHQIDLLELLSELNREKGYTLAAVLHDLN-QACRYASHLIALR-EGKIVAQGAPK 229 (265)
T ss_pred ccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEE-CCEEEEeCCHH
Confidence 999999999999999999764 899999999986 5778899999998 57899998753
No 228
>cd03232 ABC_PDR_domain2 The pleiotropic drug resistance-like (PDR) family of ATP-binding cassette (ABC) transporters. PDR is a well-described phenomenon occurring in fungi and shares several similarities with processes in bacteria and higher eukaryotes. This PDR subfamily represents domain I of its (ABC-IM)2 organization. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds including sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2e-35 Score=314.85 Aligned_cols=173 Identities=61% Similarity=0.993 Sum_probs=151.6
Q ss_pred eEEeeeeeEEEeCCcEEEEEccCCCChHHHHhhhcCCCCCCeeEEEEEEcCccCChhcccceeeEeecCCCCCCCCcHHH
Q 000997 842 LQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQETFARISGYCEQNDIHSPGLTVLE 921 (1194)
Q Consensus 842 ~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~~~~~~~gyv~Q~~~~~~~lTv~e 921 (1194)
+.+|+|+|+++++||+++|+||||||||||+++|+|.....+.+|+|.++|.++. ..+++.++|++|++.+++.+|++|
T Consensus 20 ~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~~~G~i~~~g~~~~-~~~~~~i~~~~q~~~~~~~~tv~~ 98 (192)
T cd03232 20 RQLLNNISGYVKPGTLTALMGESGAGKTTLLDVLAGRKTAGVITGEILINGRPLD-KNFQRSTGYVEQQDVHSPNLTVRE 98 (192)
T ss_pred eEeEEccEEEEeCCcEEEEECCCCCCHHHHHHHHhCCCcCCCcceEEEECCEehH-HHhhhceEEecccCccccCCcHHH
Confidence 5699999999999999999999999999999999997432246899999998764 345667999999998889999999
Q ss_pred HHHHHhhhcCCCcCcHHHHHHHHHHHHHHcCCCcccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCH
Q 000997 922 SLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSGLDA 1001 (1194)
Q Consensus 922 ~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEPTsgLD~ 1001 (1194)
|+.+...+ + .||||||||++||+||+.+|++|+|||||+|||+
T Consensus 99 ~l~~~~~~-------------------~------------------~LSgGe~qrv~la~al~~~p~vlllDEP~~~LD~ 141 (192)
T cd03232 99 ALRFSALL-------------------R------------------GLSVEQRKRLTIGVELAAKPSILFLDEPTSGLDS 141 (192)
T ss_pred HHHHHHHH-------------------h------------------cCCHHHhHHHHHHHHHhcCCcEEEEeCCCcCCCH
Confidence 99864210 0 4999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCeEEEEccCcEEEEeC
Q 000997 1002 RAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAG 1052 (1194)
Q Consensus 1002 ~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g 1052 (1194)
.++..+++.|+++++.|+|||++||+++.++.+.+|++++|+++|++++.|
T Consensus 142 ~~~~~l~~~l~~~~~~~~tiiivtH~~~~~~~~~~d~i~~l~~~g~i~~~g 192 (192)
T cd03232 142 QAAYNIVRFLKKLADSGQAILCTIHQPSASIFEKFDRLLLLKRGGKTVYFG 192 (192)
T ss_pred HHHHHHHHHHHHHHHcCCEEEEEEcCChHHHHhhCCEEEEEcCCCeEEeCC
Confidence 999999999999987799999999998644567899999998548898865
No 229
>TIGR00960 3a0501s02 Type II (General) Secretory Pathway (IISP) Family protein.
Probab=100.00 E-value=6.8e-36 Score=325.04 Aligned_cols=195 Identities=25% Similarity=0.360 Sum_probs=164.1
Q ss_pred eeeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCceeeEEEECCccCCCCC------CCceEEEEecCCCCC
Q 000997 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV------PPRTSAYVSQQDWQV 221 (1194)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~~------~~~~~~yv~Q~d~~~ 221 (1194)
+++|+|+|+++++|++++|+|||||||||||++|+|.+++. +|+|.++|.++.... .++.++|++|++.++
T Consensus 16 ~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~i~~~~q~~~~~ 92 (216)
T TIGR00960 16 QPALDNLNFHITKGEMVFLVGHSGAGKSTFLKLILGIEKPT---RGKIRFNGQDLTRLRGREIPFLRRHIGMVFQDHRLL 92 (216)
T ss_pred eeEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEehhhcChhHHHHHHHhceEEecCcccc
Confidence 36999999999999999999999999999999999998876 999999998775432 235799999999989
Q ss_pred CCCCHHHHHHHhhhccCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhccCcchhHHHHHHHHHhCCcccccccccC
Q 000997 222 AEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGD 301 (1194)
Q Consensus 222 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~k~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 301 (1194)
+.+||+||+.++....+... .+....++++++.+||++..++.++
T Consensus 93 ~~~tv~e~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~~- 137 (216)
T TIGR00960 93 SDRTVYDNVAFPLRIIGVPP----------------------------------RDANERVSAALEKVGLEGKAHALPM- 137 (216)
T ss_pred ccccHHHHHHHHHHhcCCCH----------------------------------HHHHHHHHHHHHHcCChhhhhCChh-
Confidence 99999999988654321100 0012246778999999877776554
Q ss_pred ccCCCCChhhhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEE
Q 000997 302 EMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILL 381 (1194)
Q Consensus 302 ~~~~~LSGGqkqRvsia~al~~~~~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL 381 (1194)
.|||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|+++++. +++|+.++|+.+++..++|+|++|
T Consensus 138 ----~LSgG~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~--~~tii~vsH~~~~~~~~~d~i~~l 211 (216)
T TIGR00960 138 ----QLSGGEQQRVAIARAIVHKPPLLLADEPTGNLDPELSRDIMRLFEEFNRR--GTTVLVATHDINLVETYRHRTLTL 211 (216)
T ss_pred ----hCCHHHHHHHHHHHHHhcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHhCCEEEEE
Confidence 69999999999999999999999999999999999999999999988653 455666888889999999999999
Q ss_pred cCCeE
Q 000997 382 SEGQI 386 (1194)
Q Consensus 382 ~~G~i 386 (1194)
++|++
T Consensus 212 ~~G~i 216 (216)
T TIGR00960 212 SRGRL 216 (216)
T ss_pred eCCcC
Confidence 99974
No 230
>PRK13638 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.2e-35 Score=333.85 Aligned_cols=202 Identities=25% Similarity=0.335 Sum_probs=169.1
Q ss_pred ceEEeeeeeEEEeCCcEEEEEccCCCChHHHHhhhcCCCCCCeeEEEEEEcCccCCh-----hcccceeeEeecCCCC-C
Q 000997 841 RLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ-----ETFARISGYCEQNDIH-S 914 (1194)
Q Consensus 841 ~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~-----~~~~~~~gyv~Q~~~~-~ 914 (1194)
++.+|+|+|+++++||++||+||||||||||+++|+|..+ +.+|+|.++|.++.. ...++.+||++|++.. +
T Consensus 13 ~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~i~~~~~~~~~~~~~i~~v~q~~~~~~ 90 (271)
T PRK13638 13 DEPVLKGLNLDFSLSPVTGLVGANGCGKSTLFMNLSGLLR--PQKGAVLWQGKPLDYSKRGLLALRQQVATVFQDPEQQI 90 (271)
T ss_pred CcccccceEEEEcCCCEEEEECCCCCCHHHHHHHHcCCCC--CCccEEEECCEEcccccCCHHHHHhheEEEeeChhhcc
Confidence 3569999999999999999999999999999999999876 468999999987631 2345679999999753 3
Q ss_pred CCCcHHHHHHHHhhhcCCCcCcHHHHHHHHHHHHHHcCCCcccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeC
Q 000997 915 PGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDE 994 (1194)
Q Consensus 915 ~~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illLDE 994 (1194)
...|+.||+.+..... .....+..+.++++++.+++.+..+.. +..||||||||++||++|+.+|+||+|||
T Consensus 91 ~~~~~~~~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LSgG~~qrl~laraL~~~p~lllLDE 162 (271)
T PRK13638 91 FYTDIDSDIAFSLRNL---GVPEAEITRRVDEALTLVDAQHFRHQP-----IQCLSHGQKKRVAIAGALVLQARYLLLDE 162 (271)
T ss_pred ccccHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCHhHhcCC-----chhCCHHHHHHHHHHHHHHcCCCEEEEeC
Confidence 4568999998764332 122333445678899999998776654 35899999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCeEEEEccCcEEEEeCCC
Q 000997 995 PTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1194)
Q Consensus 995 PTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~ 1054 (1194)
||+|||+.++..+.+.|+++.++|.|||+++|+++ .+.+.+|++++|++ |++++.|+.
T Consensus 163 Pt~~LD~~~~~~l~~~l~~~~~~g~tii~vtH~~~-~~~~~~d~i~~l~~-G~i~~~g~~ 220 (271)
T PRK13638 163 PTAGLDPAGRTQMIAIIRRIVAQGNHVIISSHDID-LIYEISDAVYVLRQ-GQILTHGAP 220 (271)
T ss_pred CcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEeCCH
Confidence 99999999999999999999877999999999986 46678999999984 789998875
No 231
>cd03266 ABC_NatA_sodium_exporter NatA is the ATPase component of a bacterial ABC-type Na+ transport system called NatAB, which catalyzes ATP-dependent electrogenic Na+ extrusion without mechanically coupled proton or K+ uptake. NatB possess six putative membrane spanning regions at its C-terminus. In B. subtilus, NatAB is inducible by agents such as ethanol and protonophores, which lower the protonmotive force across the membrane. The closest sequence similarity to NatA is exhibited by DrrA of the two-component daunomycin- and doxorubicin-efflux system. Hence, the functional NatAB is presumably assembled with two copies of a single ATP-binding protein and a single intergral membrane protein.
Probab=100.00 E-value=1.4e-35 Score=323.02 Aligned_cols=198 Identities=29% Similarity=0.457 Sum_probs=166.8
Q ss_pred eeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCceeeEEEECCccCCCC--CCCceEEEEecCCCCCCCCCH
Q 000997 149 TILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEF--VPPRTSAYVSQQDWQVAEMTV 226 (1194)
Q Consensus 149 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~--~~~~~~~yv~Q~d~~~~~lTV 226 (1194)
++|+|+|+++++|++++|+|||||||||||++|+|.+++. +|+|.++|.++... ..++.++|++|++.+++.+||
T Consensus 19 ~il~~~sl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~i~~~~q~~~~~~~~tv 95 (218)
T cd03266 19 QAVDGVSFTVKPGEVTGLLGPNGAGKTTTLRMLAGLLEPD---AGFATVDGFDVVKEPAEARRRLGFVSDSTGLYDRLTA 95 (218)
T ss_pred eeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCC---CceEEECCEEcccCHHHHHhhEEEecCCcccCcCCCH
Confidence 6999999999999999999999999999999999998876 99999999887532 124679999999988898999
Q ss_pred HHHHHHhhhccCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhccCcchhHHHHHHHHHhCCcccccccccCccCCC
Q 000997 227 RETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEMLKG 306 (1194)
Q Consensus 227 ~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~k~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~ 306 (1194)
+||+.+.....+... .+....++++++.+||++..+..++ .
T Consensus 96 ~e~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~~-----~ 136 (218)
T cd03266 96 RENLEYFAGLYGLKG----------------------------------DELTARLEELADRLGMEELLDRRVG-----G 136 (218)
T ss_pred HHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCCHHHHhhhhh-----h
Confidence 999987543221100 0012246788999999887776554 6
Q ss_pred CChhhhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEcCCeE
Q 000997 307 ISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEGQI 386 (1194)
Q Consensus 307 LSGGqkqRvsia~al~~~~~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~~G~i 386 (1194)
|||||||||+||+|++.+|++|+|||||+|||+.++..+.+.|+++.+ . +.+|+.++|..+++.+++|++++|++|++
T Consensus 137 LS~G~~qrv~laral~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~-~-~~tii~~tH~~~~~~~~~d~i~~l~~G~i 214 (218)
T cd03266 137 FSTGMRQKVAIARALVHDPPVLLLDEPTTGLDVMATRALREFIRQLRA-L-GKCILFSTHIMQEVERLCDRVVVLHRGRV 214 (218)
T ss_pred cCHHHHHHHHHHHHHhcCCCEEEEcCCCcCCCHHHHHHHHHHHHHHHH-C-CCEEEEEeCCHHHHHHhcCEEEEEECCEE
Confidence 999999999999999999999999999999999999999999999864 2 44566688888999999999999999999
Q ss_pred EEec
Q 000997 387 VYQG 390 (1194)
Q Consensus 387 v~~G 390 (1194)
++.|
T Consensus 215 ~~~~ 218 (218)
T cd03266 215 VYEG 218 (218)
T ss_pred eecC
Confidence 8764
No 232
>cd03263 ABC_subfamily_A The ABCA subfamily mediates the transport of a variety of lipid compounds. Mutations of members of ABCA subfamily are associated with human genetic diseases, such as, familial high-density lipoprotein (HDL) deficiency, neonatal surfactant deficiency, degenerative retinopathies, and congenital keratinization disorders. The ABCA1 protein is involved in disorders of cholesterol transport and high-density lipoprotein (HDL) biosynthesis. The ABCA4 (ABCR) protein transports vitamin A derivatives in the outer segments of photoreceptor cells, and therefore, performs a crucial step in the visual cycle. The ABCA genes are not present in yeast. However, evolutionary studies of ABCA genes indicate that they arose as transporters that subsequently duplicated and that certain sets of ABCA genes were lost in different eukaryotic lineages.
Probab=100.00 E-value=1e-35 Score=324.73 Aligned_cols=203 Identities=29% Similarity=0.419 Sum_probs=171.4
Q ss_pred eeeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCceeeEEEECCccCCCC--CCCceEEEEecCCCCCCCCC
Q 000997 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEF--VPPRTSAYVSQQDWQVAEMT 225 (1194)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~--~~~~~~~yv~Q~d~~~~~lT 225 (1194)
+++|+|+|+++++|++++|+||||||||||+++|+|.+++. +|+|.++|.++... ..++.++|++|++.+++.+|
T Consensus 15 ~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~i~~v~q~~~~~~~~t 91 (220)
T cd03263 15 KPAVDDLSLNVYKGEIFGLLGHNGAGKTTTLKMLTGELRPT---SGTAYINGYSIRTDRKAARQSLGYCPQFDALFDELT 91 (220)
T ss_pred ceeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEecccchHHHhhhEEEecCcCCccccCC
Confidence 46999999999999999999999999999999999998776 99999999886532 12456999999998888999
Q ss_pred HHHHHHHhhhccCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhccCcchhHHHHHHHHHhCCcccccccccCccCC
Q 000997 226 VRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEMLK 305 (1194)
Q Consensus 226 V~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~k~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~ 305 (1194)
|+||+.+..+..+... .+....++++++.+||.+..++.++
T Consensus 92 v~~~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~~----- 132 (220)
T cd03263 92 VREHLRFYARLKGLPK----------------------------------SEIKEEVELLLRVLGLTDKANKRAR----- 132 (220)
T ss_pred HHHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCCHHHHhChhh-----
Confidence 9999988654322100 0001236778899999887777654
Q ss_pred CCChhhhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEcCCe
Q 000997 306 GISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEGQ 385 (1194)
Q Consensus 306 ~LSGGqkqRvsia~al~~~~~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~~G~ 385 (1194)
.|||||||||+||+||+.+|++|+|||||+|||+.+...+.+.|+++++ + ++|+.++|..+++.+++|++++|++|+
T Consensus 133 ~LS~G~~qrv~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~--~-~tii~~sH~~~~~~~~~d~i~~l~~g~ 209 (220)
T cd03263 133 TLSGGMKRKLSLAIALIGGPSVLLLDEPTSGLDPASRRAIWDLILEVRK--G-RSIILTTHSMDEAEALCDRIAIMSDGK 209 (220)
T ss_pred hCCHHHHHHHHHHHHHhcCCCEEEECCCCCCCCHHHHHHHHHHHHHHhc--C-CEEEEEcCCHHHHHHhcCEEEEEECCE
Confidence 5999999999999999999999999999999999999999999998864 3 566668888889999999999999999
Q ss_pred EEEecChhhH
Q 000997 386 IVYQGPRVSV 395 (1194)
Q Consensus 386 iv~~G~~~~~ 395 (1194)
+++.|+.+++
T Consensus 210 i~~~~~~~~~ 219 (220)
T cd03263 210 LRCIGSPQEL 219 (220)
T ss_pred EEecCCHHHc
Confidence 9999987654
No 233
>PRK14242 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.4e-35 Score=327.42 Aligned_cols=219 Identities=26% Similarity=0.356 Sum_probs=173.1
Q ss_pred eeEeecceeeeecccccccccccccceEEeeeeeEEEeCCcEEEEEccCCCChHHHHhhhcCCCC---CCeeEEEEEEcC
Q 000997 816 SMAFGNINYFVDVPVELKQEGVLEDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKT---GGIIEGDIYISG 892 (1194)
Q Consensus 816 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~---~~~~~G~i~i~g 892 (1194)
.+.++|+++.+ +++.+|+|+|+++++||+++|+||||||||||+++|+|... ..+.+|+|.++|
T Consensus 6 ~l~~~~l~~~~-------------~~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g 72 (253)
T PRK14242 6 KMEARGLSFFY-------------GDFQALHDISLEFEQNQVTALIGPSGCGKSTFLRCLNRMNDLIPGARVEGEILLDG 72 (253)
T ss_pred EEEEeeeEEEE-------------CCeeeecceeEEEeCCCEEEEECCCCCCHHHHHHHHHhhcccCCCCCCceEEEECC
Confidence 46667776554 23469999999999999999999999999999999999742 113589999999
Q ss_pred ccCCh-----hcccceeeEeecCCCCCCCCcHHHHHHHHhhhcCCCcCcHHHHHHHHHHHHHHcCCCcccCCcccCCCCC
Q 000997 893 YPKRQ-----ETFARISGYCEQNDIHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGIN 967 (1194)
Q Consensus 893 ~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~ 967 (1194)
.++.. ..+++.++|++|++.+++ .|++||+.+....+.. .......+.++++++.+++.+....... ..+.
T Consensus 73 ~~i~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~enl~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~~~~~~~-~~~~ 148 (253)
T PRK14242 73 ENIYDPHVDVVELRRRVGMVFQKPNPFP-KSIFENVAYGLRVNGV--KDKAYLAERVERSLRHAALWDEVKDRLH-ESAL 148 (253)
T ss_pred EEccccccCHHHHhhcEEEEecCCCCCc-CcHHHHHHHHHHHcCC--CCHHHHHHHHHHHHHHcCCchhhhHHhh-CCcc
Confidence 87632 234567999999988887 5999999887543211 1222334567788888888542111111 1246
Q ss_pred CCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCeEEEEccCcE
Q 000997 968 GLSTEQRKRLTIAVELVANPSIVFMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGE 1047 (1194)
Q Consensus 968 ~LSgGqrqrl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~ 1047 (1194)
.|||||||||+|||+|+.+|+||+|||||+|||+.++..+.+.|+++. +|+|||+++|+++ ++.+.+|++++|.+ |+
T Consensus 149 ~LSgGq~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~-~~~tvii~tH~~~-~~~~~~d~v~~l~~-G~ 225 (253)
T PRK14242 149 GLSGGQQQRLCIARALAVEPEVLLMDEPASALDPIATQKIEELIHELK-ARYTIIIVTHNMQ-QAARVSDVTAFFYM-GK 225 (253)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHh-cCCeEEEEEecHH-HHHHhCCEEEEEEC-CE
Confidence 899999999999999999999999999999999999999999999985 4799999999986 46678999999985 78
Q ss_pred EEEeCCC
Q 000997 1048 LIYAGPL 1054 (1194)
Q Consensus 1048 ~~~~g~~ 1054 (1194)
++..|+.
T Consensus 226 i~~~g~~ 232 (253)
T PRK14242 226 LIEVGPT 232 (253)
T ss_pred EEEeCCH
Confidence 9888864
No 234
>PRK13634 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.2e-35 Score=336.53 Aligned_cols=218 Identities=23% Similarity=0.327 Sum_probs=175.3
Q ss_pred eeeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCceeeEEEECCccCCCC-------CCCceEEEEecCCC-
Q 000997 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEF-------VPPRTSAYVSQQDW- 219 (1194)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~-------~~~~~~~yv~Q~d~- 219 (1194)
.++|+|||++|++||+++|+||||||||||+++|+|.+++. +|+|.++|+++... ..++.++||+|++.
T Consensus 20 ~~~L~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~~~~~ig~v~q~~~~ 96 (290)
T PRK13634 20 RRALYDVNVSIPSGSYVAIIGHTGSGKSTLLQHLNGLLQPT---SGTVTIGERVITAGKKNKKLKPLRKKVGIVFQFPEH 96 (290)
T ss_pred ccceeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCC---CcEEEECCEECccccccchHHHHHhhEEEEeeCchh
Confidence 35999999999999999999999999999999999999876 99999999987531 12357999999862
Q ss_pred CCCCCCHHHHHHHhhhccCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhccCcchhHHHHHHHHHhCCc-cccccc
Q 000997 220 QVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLD-TCADTL 298 (1194)
Q Consensus 220 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~k~~~~~~~~~~~~~~~~l~~lgL~-~~~dt~ 298 (1194)
.+...||+||+.|+....+... .+....++.+++.+||. +..++.
T Consensus 97 ~l~~~tv~eni~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~gL~~~~~~~~ 142 (290)
T PRK13634 97 QLFEETVEKDICFGPMNFGVSE----------------------------------EDAKQKAREMIELVGLPEELLARS 142 (290)
T ss_pred hhhhhhHHHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHCCCChhhhhCC
Confidence 3445799999998643321100 00122477889999997 455655
Q ss_pred ccCccCCCCChhhhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeE
Q 000997 299 VGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDV 378 (1194)
Q Consensus 299 vg~~~~~~LSGGqkqRvsia~al~~~~~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~v 378 (1194)
+ +.|||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|++++... +++|+.++|..+++.+++|+|
T Consensus 143 ~-----~~LSgGq~qrv~lAraL~~~P~llllDEPt~~LD~~~~~~l~~~L~~l~~~~-g~tviiitHd~~~~~~~~drv 216 (290)
T PRK13634 143 P-----FELSGGQMRRVAIAGVLAMEPEVLVLDEPTAGLDPKGRKEMMEMFYKLHKEK-GLTTVLVTHSMEDAARYADQI 216 (290)
T ss_pred c-----ccCCHHHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhc-CCEEEEEeCCHHHHHHhCCEE
Confidence 4 4699999999999999999999999999999999999999999999987543 456666889999999999999
Q ss_pred EEEcCCeEEEecChhhHH---HHHHhcCCCCCC
Q 000997 379 ILLSEGQIVYQGPRVSVL---DFFASMGFSCPK 408 (1194)
Q Consensus 379 ilL~~G~iv~~G~~~~~~---~~F~~~G~~cp~ 408 (1194)
++|++|++++.|+++++. ..+...|..+|.
T Consensus 217 ~~l~~G~i~~~g~~~~~~~~~~~~~~~~~~~~~ 249 (290)
T PRK13634 217 VVMHKGTVFLQGTPREIFADPDELEAIGLDLPE 249 (290)
T ss_pred EEEECCEEEEECCHHHHhcCHHHHHHCCCCCCH
Confidence 999999999999988764 223334444443
No 235
>PRK10070 glycine betaine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.7e-35 Score=345.06 Aligned_cols=206 Identities=20% Similarity=0.281 Sum_probs=175.6
Q ss_pred eeeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCceeeEEEECCccCCCCCC-------CceEEEEecCCCC
Q 000997 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVP-------PRTSAYVSQQDWQ 220 (1194)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~~~-------~~~~~yv~Q~d~~ 220 (1194)
..+|+|+|++|++||+++|+|||||||||||++|+|.++|. +|+|.++|.++..... ++.++||+|++.+
T Consensus 41 ~~~L~~isl~i~~Gei~~LvG~NGsGKSTLLr~I~Gl~~p~---sG~I~i~G~~i~~~~~~~l~~~~~~~igyv~Q~~~l 117 (400)
T PRK10070 41 SLGVKDASLAIEEGEIFVIMGLSGSGKSTMVRLLNRLIEPT---RGQVLIDGVDIAKISDAELREVRRKKIAMVFQSFAL 117 (400)
T ss_pred eEEEEeEEEEEcCCCEEEEECCCCchHHHHHHHHHcCCCCC---CCEEEECCEECCcCCHHHHHHHHhCCEEEEECCCcC
Confidence 46899999999999999999999999999999999999876 9999999998765432 3479999999999
Q ss_pred CCCCCHHHHHHHhhhccCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhccCcchhHHHHHHHHHhCCccccccccc
Q 000997 221 VAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVG 300 (1194)
Q Consensus 221 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~k~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg 300 (1194)
++.+||+||+.|.....+... .+...+++++++.+||.+..++.+
T Consensus 118 ~~~~Tv~enl~~~~~~~~~~~----------------------------------~~~~~~~~e~L~~~gL~~~~~~~~- 162 (400)
T PRK10070 118 MPHMTVLDNTAFGMELAGINA----------------------------------EERREKALDALRQVGLENYAHSYP- 162 (400)
T ss_pred CCCCCHHHHHHHHHHhcCCCH----------------------------------HHHHHHHHHHHHHcCCChhhhcCc-
Confidence 999999999998754332110 001124678899999988777655
Q ss_pred CccCCCCChhhhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEE
Q 000997 301 DEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVIL 380 (1194)
Q Consensus 301 ~~~~~~LSGGqkqRvsia~al~~~~~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vil 380 (1194)
+.|||||||||+|||||+.+|++|||||||+|||+.++..+.+.|+++.+.. +++|+.++|..+++..++|+|++
T Consensus 163 ----~~LSgGq~QRv~LArAL~~~P~iLLLDEPts~LD~~~r~~l~~~L~~l~~~~-g~TIIivTHd~~~~~~~~Dri~v 237 (400)
T PRK10070 163 ----DELSGGMRQRVGLARALAINPDILLMDEAFSALDPLIRTEMQDELVKLQAKH-QRTIVFISHDLDEAMRIGDRIAI 237 (400)
T ss_pred ----ccCCHHHHHHHHHHHHHhcCCCEEEEECCCccCCHHHHHHHHHHHHHHHHHC-CCeEEEEECCHHHHHHhCCEEEE
Confidence 4699999999999999999999999999999999999999999999986543 45566688999999999999999
Q ss_pred EcCCeEEEecChhhHH
Q 000997 381 LSEGQIVYQGPRVSVL 396 (1194)
Q Consensus 381 L~~G~iv~~G~~~~~~ 396 (1194)
|++|++++.|+++++.
T Consensus 238 L~~G~i~~~g~~~~l~ 253 (400)
T PRK10070 238 MQNGEVVQVGTPDEIL 253 (400)
T ss_pred EECCEEEecCCHHHHH
Confidence 9999999999988764
No 236
>TIGR03410 urea_trans_UrtE urea ABC transporter, ATP-binding protein UrtE. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=100.00 E-value=1.3e-35 Score=326.16 Aligned_cols=201 Identities=27% Similarity=0.338 Sum_probs=166.8
Q ss_pred cceEEeeeeeEEEeCCcEEEEEccCCCChHHHHhhhcCCCCCCeeEEEEEEcCccCChh----cccceeeEeecCCCCCC
Q 000997 840 DRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQE----TFARISGYCEQNDIHSP 915 (1194)
Q Consensus 840 ~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~----~~~~~~gyv~Q~~~~~~ 915 (1194)
+++.+|+|+||++++||++||+|+||||||||+++|+|... +.+|+|.++|.+.... ..++.++|++|++.+++
T Consensus 11 ~~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~ 88 (230)
T TIGR03410 11 GQSHILRGVSLEVPKGEVTCVLGRNGVGKTTLLKTLMGLLP--VKSGSIRLDGEDITKLPPHERARAGIAYVPQGREIFP 88 (230)
T ss_pred CCeEEecceeeEECCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCCEEEECCEECCCCCHHHHHHhCeEEeccCCcccC
Confidence 34579999999999999999999999999999999999876 4689999999875421 12457999999999999
Q ss_pred CCcHHHHHHHHhhhcCCCcCcHHHHHHHHHHHHHHcC-CCcccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeC
Q 000997 916 GLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVE-LTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDE 994 (1194)
Q Consensus 916 ~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~-l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illLDE 994 (1194)
.+|++||+.+....+.. . ..+..+++++.++ +.+..+.. +..||||||||++||++|+.+|++|+|||
T Consensus 89 ~~tv~~~l~~~~~~~~~---~---~~~~~~~~l~~~~~l~~~~~~~-----~~~LS~G~~qrv~la~al~~~p~illlDE 157 (230)
T TIGR03410 89 RLTVEENLLTGLAALPR---R---SRKIPDEIYELFPVLKEMLGRR-----GGDLSGGQQQQLAIARALVTRPKLLLLDE 157 (230)
T ss_pred CCcHHHHHHHHHHhcCc---c---hHHHHHHHHHHHHhHHHHhhCC-----hhhCCHHHHHHHHHHHHHhcCCCEEEecC
Confidence 99999999886543211 1 1233566777776 44444443 35799999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCeEEEEccCcEEEEeCCCC
Q 000997 995 PTSGLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLG 1055 (1194)
Q Consensus 995 PTsgLD~~~~~~i~~~l~~l~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~~ 1055 (1194)
||+|||+.++..+.+.|++++++ |+|||++||+++ ++...+|++++|. +|+++..|+..
T Consensus 158 Pt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~-~~~~~~d~v~~l~-~g~i~~~~~~~ 217 (230)
T TIGR03410 158 PTEGIQPSIIKDIGRVIRRLRAEGGMAILLVEQYLD-FARELADRYYVME-RGRVVASGAGD 217 (230)
T ss_pred CcccCCHHHHHHHHHHHHHHHHcCCcEEEEEeCCHH-HHHHhCCEEEEEE-CCEEEEECCHH
Confidence 99999999999999999998864 899999999976 4666799999998 57999998864
No 237
>TIGR01184 ntrCD nitrate transport ATP-binding subunits C and D. This model describes the ATP binding subunits of nitrate transport in bacteria and archaea. This protein belongs to the ATP-binding cassette (ABC) superfamily. It is thought that the two subunits encoded by ntrC and ntrD form the binding surface for interaction with ATP. This model is restricted in identifying ATP binding subunit associated with the nitrate transport. Nitrate assimilation is aided by other proteins derived from the operon which among others include products of ntrA - a regulatory protein; ntrB - a hydropbobic transmembrane permease and narB - a reductase.
Probab=100.00 E-value=1.3e-35 Score=325.53 Aligned_cols=198 Identities=26% Similarity=0.354 Sum_probs=165.7
Q ss_pred eeeeeEEEeCCcEEEEEccCCCChHHHHhhhcCCCCCCeeEEEEEEcCccCChhcccceeeEeecCCCCCCCCcHHHHHH
Q 000997 845 LVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQETFARISGYCEQNDIHSPGLTVLESLL 924 (1194)
Q Consensus 845 L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~~~~~~~gyv~Q~~~~~~~lTv~e~l~ 924 (1194)
|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++.... ...+|++|++.+++.+|+.||+.
T Consensus 1 l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~~~~~~--~~~~~v~q~~~l~~~~tv~e~l~ 76 (230)
T TIGR01184 1 LKGVNLTIQQGEFISLIGHSGCGKSTLLNLISGLAQ--PTSGGVILEGKQITEPG--PDRMVVFQNYSLLPWLTVRENIA 76 (230)
T ss_pred CCceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEECCCCC--hhheEEecCcccCCCCCHHHHHH
Confidence 469999999999999999999999999999999876 46899999998764321 12489999999999999999998
Q ss_pred HHhhhcCCCcCcHHHHHHHHHHHHHHcCCCcccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHH
Q 000997 925 FSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSGLDARAA 1004 (1194)
Q Consensus 925 f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEPTsgLD~~~~ 1004 (1194)
+......+ .....+..+.+.++++.+++.+..+..+ ..||||||||++||++|+.+|++|+|||||+|||+.++
T Consensus 77 ~~~~~~~~-~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSgG~~qrv~la~al~~~p~lllLDEPt~gLD~~~~ 150 (230)
T TIGR01184 77 LAVDRVLP-DLSKSERRAIVEEHIALVGLTEAADKRP-----GQLSGGMKQRVAIARALSIRPKVLLLDEPFGALDALTR 150 (230)
T ss_pred HHHHhccc-CCCHHHHHHHHHHHHHHcCCHHHHcCCh-----hhCCHHHHHHHHHHHHHHcCCCEEEEcCCCcCCCHHHH
Confidence 75321111 2223344456788999999987666543 57999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCeEEEEccCcEEEEeCCC
Q 000997 1005 AIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1194)
Q Consensus 1005 ~~i~~~l~~l~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~ 1054 (1194)
..+.+.|++++++ |+|||++||+++ ++.+.+|++++|++ |+++..|+.
T Consensus 151 ~~l~~~l~~~~~~~~~tii~~sH~~~-~~~~~~d~v~~l~~-G~i~~~~~~ 199 (230)
T TIGR01184 151 GNLQEELMQIWEEHRVTVLMVTHDVD-EALLLSDRVVMLTN-GPAANIGQI 199 (230)
T ss_pred HHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhcCEEEEEeC-CcEecccCc
Confidence 9999999998764 899999999986 56778999999984 788887754
No 238
>PRK09984 phosphonate/organophosphate ester transporter subunit; Provisional
Probab=100.00 E-value=1.5e-35 Score=331.85 Aligned_cols=209 Identities=28% Similarity=0.386 Sum_probs=171.8
Q ss_pred cceEEeeeeeEEEeCCcEEEEEccCCCChHHHHhhhcCCCCCC-eeEEEEEEcCccCCh--------hcccceeeEeecC
Q 000997 840 DRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGG-IIEGDIYISGYPKRQ--------ETFARISGYCEQN 910 (1194)
Q Consensus 840 ~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~-~~~G~i~i~g~~~~~--------~~~~~~~gyv~Q~ 910 (1194)
+++.+|+|+||++++||+++|+||||||||||+++|+|...+. ..+|+|.++|.++.. ...++.++|++|+
T Consensus 15 ~~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~p~~~~~G~i~~~g~~~~~~~~~~~~~~~~~~~i~~~~q~ 94 (262)
T PRK09984 15 NQHQALHAVDLNIHHGEMVALLGPSGSGKSTLLRHLSGLITGDKSAGSHIELLGRTVQREGRLARDIRKSRANTGYIFQQ 94 (262)
T ss_pred CCeEEEecceEEEcCCcEEEEECCCCCCHHHHHHHHhccCCCCCCCceEEEECCEecccccccchhHHHHHhheEEEccc
Confidence 3467999999999999999999999999999999999986532 236999999987532 2235578999999
Q ss_pred CCCCCCCcHHHHHHHHhhhcCCC-----cCcHHHHHHHHHHHHHHcCCCcccCCcccCCCCCCCCHHHHHHHHHHHHHhh
Q 000997 911 DIHSPGLTVLESLLFSAWLRLPS-----EIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVA 985 (1194)
Q Consensus 911 ~~~~~~lTv~e~l~f~~~lr~~~-----~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~ 985 (1194)
+.+++.+|++||+.+......+. .....+....++++++.+++.+..+..+ ..||+||||||+|||||+.
T Consensus 95 ~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrv~laral~~ 169 (262)
T PRK09984 95 FNLVNRLSVLENVLIGALGSTPFWRTCFSWFTREQKQRALQALTRVGMVHFAHQRV-----STLSGGQQQRVAIARALMQ 169 (262)
T ss_pred cccccCCcHHHHHHhhhcccccchhhhcccccHHHHHHHHHHHHHcCCHHHHhCCc-----cccCHHHHHHHHHHHHHhc
Confidence 99999999999998753211000 0111233456789999999987666543 5799999999999999999
Q ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCCcHHHHHhcCeEEEEccCcEEEEeCCCC
Q 000997 986 NPSIVFMDEPTSGLDARAAAIVMRTVRNIVN-TGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLG 1055 (1194)
Q Consensus 986 ~p~illLDEPTsgLD~~~~~~i~~~l~~l~~-~g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~~ 1055 (1194)
+|+||+|||||+|||+.++..+.+.|+++++ .|.|||++||+++ .+.+.+|++++|. +|++++.|+..
T Consensus 170 ~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~g~tvii~tH~~~-~~~~~~d~i~~l~-~g~i~~~g~~~ 238 (262)
T PRK09984 170 QAKVILADEPIASLDPESARIVMDTLRDINQNDGITVVVTLHQVD-YALRYCERIVALR-QGHVFYDGSSQ 238 (262)
T ss_pred CCCEEEecCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEE-CCEEEEeCCHH
Confidence 9999999999999999999999999999975 4899999999986 4678899999998 47899988764
No 239
>PRK14245 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.5e-35 Score=327.86 Aligned_cols=207 Identities=23% Similarity=0.299 Sum_probs=166.6
Q ss_pred ceEEeeeeeEEEeCCcEEEEEccCCCChHHHHhhhcCCC---CCCeeEEEEEEcCccCCh-----hcccceeeEeecCCC
Q 000997 841 RLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRK---TGGIIEGDIYISGYPKRQ-----ETFARISGYCEQNDI 912 (1194)
Q Consensus 841 ~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~---~~~~~~G~i~i~g~~~~~-----~~~~~~~gyv~Q~~~ 912 (1194)
.+.+|+|+||++++||++||+||||||||||+++|+|.. +..+.+|+|.++|.++.. ..+++.++|++|++.
T Consensus 15 ~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~v~q~~~ 94 (250)
T PRK14245 15 DFHALKGISMEIEEKSVVAFIGPSGCGKSTFLRLFNRMNDLIPATRLEGEIRIDGRNIYDKGVQVDELRKNVGMVFQRPN 94 (250)
T ss_pred CEeEEeeeeEEEeCCCEEEEECCCCCCHHHHHHHHhhhhcccCCCCCceEEEECCEecccccccHHHHhhheEEEecCCc
Confidence 457999999999999999999999999999999999962 211247999999987642 234567999999988
Q ss_pred CCCCCcHHHHHHHHhhhcCCCcCcHHHHHHHHHHHHHHcCCCcccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEE
Q 000997 913 HSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFM 992 (1194)
Q Consensus 913 ~~~~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illL 992 (1194)
+++ .|+.||+.+....+.. .......+.++++++.+++.+....... ..+..||||||||++|||+|+.+|++|+|
T Consensus 95 ~~~-~tv~~nl~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~~~~~~~-~~~~~LS~G~~qrv~laral~~~p~lllL 170 (250)
T PRK14245 95 PFP-KSIFENVAYGLRVNGV--KDNAFIRQRVEETLKGAALWDEVKDKLK-ESAFALSGGQQQRLCIARAMAVSPSVLLM 170 (250)
T ss_pred cCc-ccHHHHHHHHHHHcCC--CcHHHHHHHHHHHHHHcCCCcchhhhhh-CCcccCCHHHHHHHHHHHHHhcCCCEEEE
Confidence 876 5999999886543311 1122234567888999988642211111 12468999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCeEEEEccCcEEEEeCCC
Q 000997 993 DEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1194)
Q Consensus 993 DEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~ 1054 (1194)
||||+|||+.++..+.+.|+++. +++|||+++|+++ .+.+.+|++++|+ +|++++.|+.
T Consensus 171 DEPt~~LD~~~~~~l~~~l~~~~-~~~tiiivtH~~~-~~~~~~d~v~~l~-~G~~~~~~~~ 229 (250)
T PRK14245 171 DEPASALDPISTAKVEELIHELK-KDYTIVIVTHNMQ-QAARVSDKTAFFY-MGEMVEYDDT 229 (250)
T ss_pred eCCCccCCHHHHHHHHHHHHHHh-cCCeEEEEeCCHH-HHHhhCCEEEEEE-CCEEEEECCH
Confidence 99999999999999999999985 5899999999986 4678899999998 5799999875
No 240
>cd03260 ABC_PstB_phosphate_transporter Phosphate uptake is of fundamental importance in the cell physiology of bacteria because phosphate is required as a nutrient. The Pst system of E. coli comprises four distinct subunits encoded by the pstS, pstA, pstB, and pstC genes. The PstS protein is a phosphate-binding protein located in the periplasmic space. P stA and PstC are hydrophobic and they form the transmembrane portion of the Pst system. PstB is the catalytic subunit, which couples the energy of ATP hydrolysis to the import of phosphate across cellular membranes through the Pst system, often referred as ABC-protein. PstB belongs to one of the largest superfamilies of proteins characterized by a highly conserved adenosine triphosphate (ATP) binding cassette (ABC), which is also a nucleotide binding domain (NBD).
Probab=100.00 E-value=1.3e-35 Score=325.35 Aligned_cols=203 Identities=24% Similarity=0.325 Sum_probs=168.6
Q ss_pred eeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHhcCc-----CCCCceeeEEEECCccCCCCC-----CCceEEEEecCC
Q 000997 149 TILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRL-----GHHLQVSGKITYNGHGFKEFV-----PPRTSAYVSQQD 218 (1194)
Q Consensus 149 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l-----~~~~~~~G~i~~~G~~~~~~~-----~~~~~~yv~Q~d 218 (1194)
++|+|+|++|++|++++|+||||||||||+++|+|.+ ++. +|+|.++|.++.... .++.++|++|++
T Consensus 14 ~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~ 90 (227)
T cd03260 14 HALKDISLDIPKGEITALIGPSGCGKSTLLRLLNRLNDLIPGAPD---EGEVLLDGKDIYDLDVDVLELRRRVGMVFQKP 90 (227)
T ss_pred eeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCC---CeEEEECCEEhhhcchHHHHHHhhEEEEecCc
Confidence 6999999999999999999999999999999999998 554 999999998865432 245799999998
Q ss_pred CCCCCCCHHHHHHHhhhccCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhccCcchhHHHHHHHHHhCCccccccc
Q 000997 219 WQVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTL 298 (1194)
Q Consensus 219 ~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~k~~~~~~~~~~~~~~~~l~~lgL~~~~dt~ 298 (1194)
.++ .+||+||+.++....+.... .+....++++++.+||.+..+..
T Consensus 91 ~~~-~~tv~e~l~~~~~~~~~~~~---------------------------------~~~~~~~~~~l~~~~l~~~~~~~ 136 (227)
T cd03260 91 NPF-PGSIYDNVAYGLRLHGIKLK---------------------------------EELDERVEEALRKAALWDEVKDR 136 (227)
T ss_pred hhc-cccHHHHHHhHHHhcCCCcH---------------------------------HHHHHHHHHHHHHcCCChHHhcc
Confidence 877 79999999886543211000 00122467789999998766654
Q ss_pred ccCccCCCCChhhhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeE
Q 000997 299 VGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDV 378 (1194)
Q Consensus 299 vg~~~~~~LSGGqkqRvsia~al~~~~~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~v 378 (1194)
+. +..|||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|+++++. ++|+.++|+.+++.+++|++
T Consensus 137 ~~---~~~LSgG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~---~tii~~sH~~~~~~~~~d~i 210 (227)
T cd03260 137 LH---ALGLSGGQQQRLCLARALANEPEVLLLDEPTSALDPISTAKIEELIAELKKE---YTIVIVTHNMQQAARVADRT 210 (227)
T ss_pred CC---cccCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhhC---cEEEEEeccHHHHHHhCCEE
Confidence 31 2579999999999999999999999999999999999999999999998652 56666888889999999999
Q ss_pred EEEcCCeEEEecChhh
Q 000997 379 ILLSEGQIVYQGPRVS 394 (1194)
Q Consensus 379 ilL~~G~iv~~G~~~~ 394 (1194)
++|++|++++.|+.++
T Consensus 211 ~~l~~G~i~~~g~~~~ 226 (227)
T cd03260 211 AFLLNGRLVEFGPTEQ 226 (227)
T ss_pred EEEeCCEEEEecCccc
Confidence 9999999999998764
No 241
>TIGR03608 L_ocin_972_ABC putative bacteriocin export ABC transporter, lactococcin 972 group. A gene pair with a fairly wide distribution consists of a polypeptide related to the lactococcin 972 (see TIGR01653) and multiple-membrane-spanning putative immunity protein (see TIGR01654). This model represents a small clade within the ABC transporters that regularly are found adjacent to these bacteriocin system gene pairs and are likely serve as export proteins.
Probab=100.00 E-value=1.9e-35 Score=319.23 Aligned_cols=191 Identities=24% Similarity=0.365 Sum_probs=162.5
Q ss_pred cceEEeeeeeEEEeCCcEEEEEccCCCChHHHHhhhcCCCCCCeeEEEEEEcCccCC---h----hcccceeeEeecCCC
Q 000997 840 DRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKR---Q----ETFARISGYCEQNDI 912 (1194)
Q Consensus 840 ~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~---~----~~~~~~~gyv~Q~~~ 912 (1194)
+++.+|+|+||++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++. . ...++.++|++|++.
T Consensus 9 ~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~~~~~~~~~~~~~~i~~~~q~~~ 86 (206)
T TIGR03608 9 GDKIILDDLNLTIEKGKMYAIIGESGSGKSTLLNIIGLLEK--FDSGQVYLNGKETPPLNSKKASKFRREKLGYLFQNFA 86 (206)
T ss_pred CCEEEEeceEEEEeCCcEEEEECCCCCCHHHHHHHHhcCCC--CCCeEEEECCEEccccchhhHHHHHHhCeeEEecchh
Confidence 34579999999999999999999999999999999999876 46899999998742 1 124567999999999
Q ss_pred CCCCCcHHHHHHHHhhhcCCCcCcHHHHHHHHHHHHHHcCCCcccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEE
Q 000997 913 HSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFM 992 (1194)
Q Consensus 913 ~~~~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illL 992 (1194)
+++.+|++||+.+..... ........+.++++++.+++.+..+..+ .+||+|||||++||++|+.+|++|+|
T Consensus 87 ~~~~~t~~e~~~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~lS~G~~qr~~laral~~~p~llll 158 (206)
T TIGR03608 87 LIENETVEENLDLGLKYK---KLSKKEKREKKKEALEKVGLNLKLKQKI-----YELSGGEQQRVALARAILKDPPLILA 158 (206)
T ss_pred hccCCcHHHHHHHHHHhc---CCCHHHHHHHHHHHHHHcCchhhhcCCh-----hhCCHHHHHHHHHHHHHHcCCCEEEE
Confidence 989999999999865432 1223344556789999999987766653 57999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCeEEEE
Q 000997 993 DEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFM 1042 (1194)
Q Consensus 993 DEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~~d~~~~l 1042 (1194)
||||+|||+.+...+.+.|+++.++|.|||+++|++. ..+.+|++++|
T Consensus 159 DEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sh~~~--~~~~~d~i~~l 206 (206)
T TIGR03608 159 DEPTGSLDPKNRDEVLDLLLELNDEGKTIIIVTHDPE--VAKQADRVIEL 206 (206)
T ss_pred eCCcCCCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHH--HHhhcCEEEeC
Confidence 9999999999999999999999877999999999975 34679999875
No 242
>cd03267 ABC_NatA_like Similar in sequence to NatA, this is the ATPase component of a bacterial ABC-type Na+ transport system called NatAB, which catalyzes ATP-dependent electrogenic Na+ extrusion without mechanically coupled to proton or K+ uptake. NatB possess six putative membrane spanning regions at its C-terminus. In B. subtilis, NatAB is inducible by agents such as ethanol and protonophores, which lower the protonmotive force across the membrane. The closest sequence similarity to NatA is exhibited by DrrA of the two-component daunomycin- and doxorubicin-efflux system. Hence, the functional NatAB is presumably assembled with two copies of the single ATP-binding protein and the single intergral membrane protein.
Probab=100.00 E-value=2.8e-35 Score=324.14 Aligned_cols=202 Identities=28% Similarity=0.409 Sum_probs=168.9
Q ss_pred ccceEEeeeeeEEEeCCcEEEEEccCCCChHHHHhhhcCCCCCCeeEEEEEEcCccCCh--hcccceeeEee-cCCCCCC
Q 000997 839 EDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ--ETFARISGYCE-QNDIHSP 915 (1194)
Q Consensus 839 ~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~--~~~~~~~gyv~-Q~~~~~~ 915 (1194)
++.+.+|+|+||++++||++||+|+||||||||+++|+|..+ +.+|+|.++|.+... ..+++.++|++ |++.+++
T Consensus 31 ~~~~~il~~vs~~i~~Ge~~~i~G~NGsGKSTLl~~i~Gl~~--p~~G~i~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~ 108 (236)
T cd03267 31 YREVEALKGISFTIEKGEIVGFIGPNGAGKTTTLKILSGLLQ--PTSGEVRVAGLVPWKRRKKFLRRIGVVFGQKTQLWW 108 (236)
T ss_pred cCCeeeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCcC--CCceEEEECCEEccccchhhcccEEEEcCCccccCC
Confidence 355689999999999999999999999999999999999876 468999999986432 23456789997 5567778
Q ss_pred CCcHHHHHHHHhhhcCCCcCcHHHHHHHHHHHHHHcCCCcccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCC
Q 000997 916 GLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEP 995 (1194)
Q Consensus 916 ~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEP 995 (1194)
.+|++|++.+...++. ....+..+.++++++.+++.+..+..+ ..||||||||++||++|+.+|++|+||||
T Consensus 109 ~~tv~e~l~~~~~~~~---~~~~~~~~~~~~~l~~~gl~~~~~~~~-----~~LS~G~~qrl~la~al~~~p~llllDEP 180 (236)
T cd03267 109 DLPVIDSFYLLAAIYD---LPPARFKKRLDELSELLDLEELLDTPV-----RQLSLGQRMRAEIAAALLHEPEILFLDEP 180 (236)
T ss_pred CCcHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCChhHhcCCh-----hhCCHHHHHHHHHHHHHhcCCCEEEEcCC
Confidence 8999999988654432 223334456778899999987776653 57999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCeEEEEccCcEEEEeC
Q 000997 996 TSGLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAG 1052 (1194)
Q Consensus 996 TsgLD~~~~~~i~~~l~~l~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g 1052 (1194)
|+|||+.++..+.+.|++++++ |+|||+++|+++ .+.+.+|++++|.+ |++++.|
T Consensus 181 t~~LD~~~~~~l~~~l~~~~~~~~~tiiivsH~~~-~~~~~~d~i~~l~~-G~i~~~g 236 (236)
T cd03267 181 TIGLDVVAQENIRNFLKEYNRERGTTVLLTSHYMK-DIEALARRVLVIDK-GRLLYDG 236 (236)
T ss_pred CCCCCHHHHHHHHHHHHHHHhcCCCEEEEEecCHH-HHHHhCCEEEEEeC-CEEEecC
Confidence 9999999999999999999764 899999999986 46678999999984 7887654
No 243
>PRK11831 putative ABC transporter ATP-binding protein YrbF; Provisional
Probab=100.00 E-value=4.7e-35 Score=328.61 Aligned_cols=207 Identities=21% Similarity=0.345 Sum_probs=172.5
Q ss_pred eeeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCceeeEEEECCccCCCCC------CCceEEEEecCCCCC
Q 000997 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV------PPRTSAYVSQQDWQV 221 (1194)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~~------~~~~~~yv~Q~d~~~ 221 (1194)
+.+|+|+|++|++|++++|+|||||||||||++|+|.++|. +|+|.++|.++.... .++.++|++|++.++
T Consensus 20 ~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~~~~i~~v~q~~~~~ 96 (269)
T PRK11831 20 RCIFDNISLTVPRGKITAIMGPSGIGKTTLLRLIGGQIAPD---HGEILFDGENIPAMSRSRLYTVRKRMSMLFQSGALF 96 (269)
T ss_pred EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEEccccChhhHHHHhhcEEEEecccccC
Confidence 35999999999999999999999999999999999998776 999999998775432 135699999999889
Q ss_pred CCCCHHHHHHHhhhccCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhccCcchhHHHHHHHHHhCCcccccccccC
Q 000997 222 AEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGD 301 (1194)
Q Consensus 222 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~k~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 301 (1194)
+.+||.||+.+...... . .+ . ......+..+++.+||.+..++.++
T Consensus 97 ~~~tv~enl~~~~~~~~-~--~~------~------------------------~~~~~~~~~~l~~~gl~~~~~~~~~- 142 (269)
T PRK11831 97 TDMNVFDNVAYPLREHT-Q--LP------A------------------------PLLHSTVMMKLEAVGLRGAAKLMPS- 142 (269)
T ss_pred CCCCHHHHHHHHHHHcc-C--CC------H------------------------HHHHHHHHHHHHHcCChhhhhCChh-
Confidence 99999999987532110 0 00 0 0011236678899999887777654
Q ss_pred ccCCCCChhhhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEE
Q 000997 302 EMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILL 381 (1194)
Q Consensus 302 ~~~~~LSGGqkqRvsia~al~~~~~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL 381 (1194)
.|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++++.. +++|+.++|..+++.+++|+|++|
T Consensus 143 ----~LSgGq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~-g~tiiivsH~~~~~~~~~d~v~~l 217 (269)
T PRK11831 143 ----ELSGGMARRAALARAIALEPDLIMFDEPFVGQDPITMGVLVKLISELNSAL-GVTCVVVSHDVPEVLSIADHAYIV 217 (269)
T ss_pred ----hCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhc-CcEEEEEecCHHHHHHhhCEEEEE
Confidence 599999999999999999999999999999999999999999999986532 455666888999999999999999
Q ss_pred cCCeEEEecChhhHH
Q 000997 382 SEGQIVYQGPRVSVL 396 (1194)
Q Consensus 382 ~~G~iv~~G~~~~~~ 396 (1194)
++|++++.|+.+++.
T Consensus 218 ~~G~i~~~g~~~~~~ 232 (269)
T PRK11831 218 ADKKIVAHGSAQALQ 232 (269)
T ss_pred ECCEEEEeCCHHHHh
Confidence 999999999987763
No 244
>PRK14241 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.7e-35 Score=329.01 Aligned_cols=205 Identities=22% Similarity=0.289 Sum_probs=169.1
Q ss_pred ceEEeeeeeEEEeCCcEEEEEccCCCChHHHHhhhcCCCCCC---eeEEEEEEcCccCC-----hhcccceeeEeecCCC
Q 000997 841 RLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGG---IIEGDIYISGYPKR-----QETFARISGYCEQNDI 912 (1194)
Q Consensus 841 ~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~---~~~G~i~i~g~~~~-----~~~~~~~~gyv~Q~~~ 912 (1194)
++.+|+|+|+++++||++||+||||||||||+++|+|..++. +.+|+|.++|.++. ...+++.+||++|++.
T Consensus 16 ~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~laGl~~~~~~~~~~G~I~~~g~~~~~~~~~~~~~~~~i~~~~q~~~ 95 (258)
T PRK14241 16 SFHAVEDVNLNIEPRSVTAFIGPSGCGKSTVLRTLNRMHEVIPGARVEGEVLLDGEDLYGPGVDPVAVRRTIGMVFQRPN 95 (258)
T ss_pred CEeeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhccCCcccCCCcceEEEECCEeccccccChHHHhcceEEEccccc
Confidence 357999999999999999999999999999999999986532 25899999998753 1234567999999999
Q ss_pred CCCCCcHHHHHHHHhhhcCCCcCcHHHHHHHHHHHHHHcCCCc----ccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCC
Q 000997 913 HSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTS----LSGALIGLPGINGLSTEQRKRLTIAVELVANPS 988 (1194)
Q Consensus 913 ~~~~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~----~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~ 988 (1194)
+++.+||+||+.+....+. .......++.++++++.+++.. ..+. .+.+|||||||||+|||+|+.+|+
T Consensus 96 ~~~~~tv~~nl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~-----~~~~LS~G~~qrv~laral~~~p~ 168 (258)
T PRK14241 96 PFPTMSIRDNVVAGLKLNG--VRNKKDLDELVEKSLRGANLWNEVKDRLDK-----PGGGLSGGQQQRLCIARAIAVEPD 168 (258)
T ss_pred cCCCCcHHHHHHHHHHhcC--CCCHHHHHHHHHHHHHHcCCchhhhhHhhC-----CcccCCHHHHHHHHHHHHHhcCCC
Confidence 9999999999988654331 1123334456788899998842 2222 236899999999999999999999
Q ss_pred EEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCeEEEEcc-----CcEEEEeCCC
Q 000997 989 IVFMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKR-----GGELIYAGPL 1054 (1194)
Q Consensus 989 illLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~-----gG~~~~~g~~ 1054 (1194)
+|+|||||+|||+.++..+.+.|++++ +++|||+++|+++ ++.+.+|++++|.+ .|++++.|+.
T Consensus 169 llllDEPt~~LD~~~~~~l~~~l~~~~-~~~tviivsH~~~-~~~~~~d~i~~l~~~~~~~~g~i~~~~~~ 237 (258)
T PRK14241 169 VLLMDEPCSALDPISTLAIEDLINELK-QDYTIVIVTHNMQ-QAARVSDQTAFFNLEATGKPGRLVEIDDT 237 (258)
T ss_pred EEEEcCCCccCCHHHHHHHHHHHHHHh-cCCEEEEEecCHH-HHHHhCCEEEEEecccCCCCceEEecCCH
Confidence 999999999999999999999999986 4789999999976 46678999999972 5899998875
No 245
>PRK13649 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.1e-35 Score=333.75 Aligned_cols=200 Identities=27% Similarity=0.351 Sum_probs=166.6
Q ss_pred eEEeeeeeEEEeCCcEEEEEccCCCChHHHHhhhcCCCCCCeeEEEEEEcCccCCh-------hcccceeeEeecCC--C
Q 000997 842 LQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ-------ETFARISGYCEQND--I 912 (1194)
Q Consensus 842 ~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~-------~~~~~~~gyv~Q~~--~ 912 (1194)
+.+|+|||+++++|++++|+||||||||||+++|+|... +.+|+|.++|.++.. ..+++.++|++|++ .
T Consensus 20 ~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~--p~~G~i~~~g~~i~~~~~~~~~~~~~~~i~~~~q~~~~~ 97 (280)
T PRK13649 20 GRALFDVNLTIEDGSYTAFIGHTGSGKSTIMQLLNGLHV--PTQGSVRVDDTLITSTSKNKDIKQIRKKVGLVFQFPESQ 97 (280)
T ss_pred cceeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEEccccccccCHHHHHhheEEEeeChhhh
Confidence 469999999999999999999999999999999999876 468999999987532 23456799999986 3
Q ss_pred CCCCCcHHHHHHHHhhhcCCCcCcHHHHHHHHHHHHHHcCCCc-ccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCEEE
Q 000997 913 HSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTS-LSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVF 991 (1194)
Q Consensus 913 ~~~~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~-~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~ill 991 (1194)
+++ .|++||+.|...... ...++..+.++++++.+++.. ..+.. +..||||||||++||+||+.+|++|+
T Consensus 98 ~~~-~tv~e~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~~LSgG~~qrv~la~al~~~p~lll 168 (280)
T PRK13649 98 LFE-ETVLKDVAFGPQNFG---VSQEEAEALAREKLALVGISESLFEKN-----PFELSGGQMRRVAIAGILAMEPKILV 168 (280)
T ss_pred hcc-ccHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCCChhhhhCC-----cccCCHHHHHHHHHHHHHHcCCCEEE
Confidence 444 699999987643321 223334456788899999963 44443 35799999999999999999999999
Q ss_pred EeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCeEEEEccCcEEEEeCCC
Q 000997 992 MDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1194)
Q Consensus 992 LDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~ 1054 (1194)
|||||+|||+.++..+.+.|++++++|+|||++||+++ .+.+.+|++++|+ +|++++.|+.
T Consensus 169 LDEPt~~LD~~~~~~l~~~l~~~~~~~~tiiivsH~~~-~~~~~~d~i~~l~-~G~i~~~g~~ 229 (280)
T PRK13649 169 LDEPTAGLDPKGRKELMTLFKKLHQSGMTIVLVTHLMD-DVANYADFVYVLE-KGKLVLSGKP 229 (280)
T ss_pred EeCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeccHH-HHHHhCCEEEEEE-CCEEEEeCCH
Confidence 99999999999999999999999877999999999976 4667899999998 5789888875
No 246
>cd03269 ABC_putative_ATPase This subfamily is involved in drug resistance, nodulation, lipid transport, and bacteriocin and lantibiotic immunity. In eubacteria and archaea, the typical organization consists of one ABC and one or two IMs. Eukaryote systems of the ABCA subfamily display ABC domains strongly similar to this family. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.5e-35 Score=320.95 Aligned_cols=198 Identities=25% Similarity=0.377 Sum_probs=167.3
Q ss_pred eeeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCceeeEEEECCccCCCCCCCceEEEEecCCCCCCCCCHH
Q 000997 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVPPRTSAYVSQQDWQVAEMTVR 227 (1194)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lTV~ 227 (1194)
+.+|+|+|+++++|++++|+|||||||||||++|+|.+++. +|+|.++|+++.. ..++.++|++|++.+++.+||+
T Consensus 13 ~~~l~~v~~~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~-~~~~~i~~~~q~~~~~~~~tv~ 88 (210)
T cd03269 13 VTALDDISFSVEKGEIFGLLGPNGAGKTTTIRMILGIILPD---SGEVLFDGKPLDI-AARNRIGYLPEERGLYPKMKVI 88 (210)
T ss_pred EEEEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCCchhH-HHHccEEEeccCCcCCcCCcHH
Confidence 46999999999999999999999999999999999998776 9999999987653 2356799999999888899999
Q ss_pred HHHHHhhhccCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhccCcchhHHHHHHHHHhCCcccccccccCccCCCC
Q 000997 228 ETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEMLKGI 307 (1194)
Q Consensus 228 E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~k~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~L 307 (1194)
||+.+.....+... ......++++++.+||++..++.+ ..|
T Consensus 89 e~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~-----~~L 129 (210)
T cd03269 89 DQLVYLAQLKGLKK----------------------------------EEARRRIDEWLERLELSEYANKRV-----EEL 129 (210)
T ss_pred HHHHHHHHHcCCCh----------------------------------HHHHHHHHHHHHHcCChHHHhCcH-----hhC
Confidence 99987543321100 001223677899999987777655 469
Q ss_pred ChhhhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEcCCeEE
Q 000997 308 SGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEGQIV 387 (1194)
Q Consensus 308 SGGqkqRvsia~al~~~~~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~~G~iv 387 (1194)
||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++.+. +.+|+.++|..+++.+++|++++|++|+++
T Consensus 130 S~G~~qrl~la~al~~~p~~lllDEP~~~LD~~~~~~~~~~l~~~~~~--~~tii~~sH~~~~~~~~~d~i~~l~~g~i~ 207 (210)
T cd03269 130 SKGNQQKVQFIAAVIHDPELLILDEPFSGLDPVNVELLKDVIRELARA--GKTVILSTHQMELVEELCDRVLLLNKGRAV 207 (210)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHHC--CCEEEEECCCHHHHHHhhhEEEEEeCCEEE
Confidence 999999999999999999999999999999999999999999988653 456666888889999999999999999998
Q ss_pred Eec
Q 000997 388 YQG 390 (1194)
Q Consensus 388 ~~G 390 (1194)
+.|
T Consensus 208 ~~~ 210 (210)
T cd03269 208 LYG 210 (210)
T ss_pred ecC
Confidence 764
No 247
>cd03224 ABC_TM1139_LivF_branched LivF (TM1139) is part of the LIV-I bacterial ABC-type two-component transport system that imports neutral, branched-chain amino acids. The E. coli branched-chain amino acid transporter comprises a heterodimer of ABC transporters (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules.
Probab=100.00 E-value=2.1e-35 Score=322.73 Aligned_cols=202 Identities=26% Similarity=0.400 Sum_probs=168.4
Q ss_pred eeeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCceeeEEEECCccCCCCCC----CceEEEEecCCCCCCC
Q 000997 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVP----PRTSAYVSQQDWQVAE 223 (1194)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~~~----~~~~~yv~Q~d~~~~~ 223 (1194)
.++|+|+|+++++|++++|+|||||||||||++|+|.+++. +|+|.++|.++..... ++.++|++|++.+++.
T Consensus 13 ~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~ 89 (222)
T cd03224 13 SQILFGVSLTVPEGEIVALLGRNGAGKTTLLKTIMGLLPPR---SGSIRFDGRDITGLPPHERARAGIGYVPEGRRIFPE 89 (222)
T ss_pred eeEeeeeeEEEcCCeEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEEcCCCCHHHHHhcCeEEeccccccCCC
Confidence 36999999999999999999999999999999999999876 9999999988754332 3569999999998999
Q ss_pred CCHHHHHHHhhhccCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhccCcchhHHHHHHHHHh-CCcccccccccCc
Q 000997 224 MTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKIL-GLDTCADTLVGDE 302 (1194)
Q Consensus 224 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~k~~~~~~~~~~~~~~~~l~~l-gL~~~~dt~vg~~ 302 (1194)
+||+||+.+.....+ . . +....++.+++.+ +|++..++.+
T Consensus 90 ~t~~~~l~~~~~~~~--~--~--------------------------------~~~~~~~~~l~~~~~l~~~~~~~~--- 130 (222)
T cd03224 90 LTVEENLLLGAYARR--R--A--------------------------------KRKARLERVYELFPRLKERRKQLA--- 130 (222)
T ss_pred CcHHHHHHHHhhhcC--c--h--------------------------------hHHHHHHHHHHHHHhhhhhhhCch---
Confidence 999999988643221 0 0 0011245566666 4666566554
Q ss_pred cCCCCChhhhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEc
Q 000997 303 MLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLS 382 (1194)
Q Consensus 303 ~~~~LSGGqkqRvsia~al~~~~~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~ 382 (1194)
+.|||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|++++. . +++|+.++|+..++.+++|+|++|+
T Consensus 131 --~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~-~~tiii~sH~~~~~~~~~d~i~~l~ 206 (222)
T cd03224 131 --GTLSGGEQQMLAIARALMSRPKLLLLDEPSEGLAPKIVEEIFEAIRELRD-E-GVTILLVEQNARFALEIADRAYVLE 206 (222)
T ss_pred --hhCCHHHHHHHHHHHHHhcCCCEEEECCCcccCCHHHHHHHHHHHHHHHH-C-CCEEEEEeCCHHHHHHhccEEEEee
Confidence 46999999999999999999999999999999999999999999999865 3 4566668888899999999999999
Q ss_pred CCeEEEecChhhH
Q 000997 383 EGQIVYQGPRVSV 395 (1194)
Q Consensus 383 ~G~iv~~G~~~~~ 395 (1194)
+|++++.|+.+++
T Consensus 207 ~G~i~~~~~~~~~ 219 (222)
T cd03224 207 RGRVVLEGTAAEL 219 (222)
T ss_pred CCeEEEeCCHHHH
Confidence 9999999987765
No 248
>TIGR03873 F420-0_ABC_ATP proposed F420-0 ABC transporter, ATP-binding protein. This small clade of ABC-type transporter ATP-binding protein components is found as a three gene cassette along with a periplasmic substrate-binding protein (TIGR03868) and a permease (TIGR03869). The organisms containing this cassette are all Actinobacteria and all contain numerous genes requiring the coenzyme F420. This model was defined based on five such organisms, four of which are lacking all F420 biosynthetic capability save the final side-chain polyglutamate attachment step (via the gene cofE: TIGR01916). In Jonesia denitrificans DSM 20603 and marine actinobacterium PHSC20C1 this cassette is in an apparent operon with the cofE gene and, in PHSC20C1, also with a F420-dependent glucose-6-phosphate dehydrogenase (TIGR03554). Based on these observations we propose that this ATP-binding protein is a component of an F420-0 (that is, F420 lacking only the polyglutamate tail) transporter.
Probab=100.00 E-value=1.8e-35 Score=330.08 Aligned_cols=207 Identities=28% Similarity=0.381 Sum_probs=171.2
Q ss_pred cceEEeeeeeEEEeCCcEEEEEccCCCChHHHHhhhcCCCCCCeeEEEEEEcCccCCh---hcccceeeEeecCCCCCCC
Q 000997 840 DRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ---ETFARISGYCEQNDIHSPG 916 (1194)
Q Consensus 840 ~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~---~~~~~~~gyv~Q~~~~~~~ 916 (1194)
+++.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++.. ...++.++|++|++.+++.
T Consensus 12 ~~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~--~~~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~~ 89 (256)
T TIGR03873 12 GGRLIVDGVDVTAPPGSLTGLLGPNGSGKSTLLRLLAGALR--PDAGTVDLAGVDLHGLSRRARARRVALVEQDSDTAVP 89 (256)
T ss_pred CCEEEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCC--CCCCEEEECCEEcccCCHHHHhhheEEecccCccCCC
Confidence 34679999999999999999999999999999999999876 468999999987532 2334568999999877788
Q ss_pred CcHHHHHHHHhh-hcCCCcCcHHHHHHHHHHHHHHcCCCcccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCC
Q 000997 917 LTVLESLLFSAW-LRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEP 995 (1194)
Q Consensus 917 lTv~e~l~f~~~-lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEP 995 (1194)
+||+||+.+... .+........+..+.+.++++.+++.+..+..+ ..||||||||++||++|+.+|++++||||
T Consensus 90 ~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrl~la~al~~~p~llllDEP 164 (256)
T TIGR03873 90 LTVRDVVALGRIPHRSLWAGDSPHDAAVVDRALARTELSHLADRDM-----STLSGGERQRVHVARALAQEPKLLLLDEP 164 (256)
T ss_pred CCHHHHHHhcchhhhhhccCCCHHHHHHHHHHHHHcCcHhhhcCCc-----ccCCHHHHHHHHHHHHHhcCCCEEEEcCc
Confidence 999999987521 100000111223356788999999987666543 57999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCeEEEEccCcEEEEeCCCC
Q 000997 996 TSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLG 1055 (1194)
Q Consensus 996 TsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~~ 1055 (1194)
|+|||+.+...+.+.|+++.++|.|||+++|+++ .+.+.+|++++|++ |+++..|+..
T Consensus 165 t~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~-G~i~~~g~~~ 222 (256)
T TIGR03873 165 TNHLDVRAQLETLALVRELAATGVTVVAALHDLN-LAASYCDHVVVLDG-GRVVAAGPPR 222 (256)
T ss_pred cccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEeC-CCEEEecCHH
Confidence 9999999999999999999877899999999987 56688999999985 7899888753
No 249
>PRK13651 cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.5e-35 Score=334.89 Aligned_cols=205 Identities=25% Similarity=0.358 Sum_probs=169.2
Q ss_pred eeeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCceeeEEEECCccCCCC----------------------
Q 000997 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEF---------------------- 205 (1194)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~---------------------- 205 (1194)
..+|+|||++|++||+++|+||||||||||+++|+|.++|+ +|+|+++|.+....
T Consensus 20 ~~~l~~vsl~i~~Ge~v~iiG~nGsGKSTLl~~L~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (305)
T PRK13651 20 LKALDNVSVEINQGEFIAIIGQTGSGKTTFIEHLNALLLPD---TGTIEWIFKDEKNKKKTKEKEKVLEKLVIQKTRFKK 96 (305)
T ss_pred ccceeeeEEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCC---CcEEEEeceecccccccccccccccccccccccccc
Confidence 35999999999999999999999999999999999999876 89999998654210
Q ss_pred -----CCCceEEEEecCC-CCCCCCCHHHHHHHhhhccCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhccCcchh
Q 000997 206 -----VPPRTSAYVSQQD-WQVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTS 279 (1194)
Q Consensus 206 -----~~~~~~~yv~Q~d-~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~k~~~~~~~~~~ 279 (1194)
..++.++||+|++ ..+...||+|||.|+....+... .+..
T Consensus 97 ~~~~~~~~~~ig~v~Q~~~~~l~~~tv~e~i~~~~~~~~~~~----------------------------------~~~~ 142 (305)
T PRK13651 97 IKKIKEIRRRVGVVFQFAEYQLFEQTIEKDIIFGPVSMGVSK----------------------------------EEAK 142 (305)
T ss_pred cchHHHHHhceEEEeeCcccccccccHHHHHHhhHHHcCCCH----------------------------------HHHH
Confidence 1245799999985 34556799999998654322100 0012
Q ss_pred HHHHHHHHHhCCc-ccccccccCccCCCCChhhhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCC
Q 000997 280 LVVEYIMKILGLD-TCADTLVGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDG 358 (1194)
Q Consensus 280 ~~~~~~l~~lgL~-~~~dt~vg~~~~~~LSGGqkqRvsia~al~~~~~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~ 358 (1194)
.+++++++.+||+ +..++.+ ..|||||||||+||++|+.+|++|+|||||+|||+.++..+.+.|+++.+ . +
T Consensus 143 ~~~~~~l~~~gL~~~~~~~~~-----~~LSgGqkqrvalA~aL~~~P~lLlLDEPt~~LD~~~~~~l~~~l~~l~~-~-g 215 (305)
T PRK13651 143 KRAAKYIELVGLDESYLQRSP-----FELSGGQKRRVALAGILAMEPDFLVFDEPTAGLDPQGVKEILEIFDNLNK-Q-G 215 (305)
T ss_pred HHHHHHHHHcCCChhhhhCCh-----hhCCHHHHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHH-C-C
Confidence 3477889999996 5556544 46999999999999999999999999999999999999999999999874 3 4
Q ss_pred eEEEEEecChhHHHhhcCeEEEEcCCeEEEecChhhHH
Q 000997 359 TTVISLLQPAPEAYELFDDVILLSEGQIVYQGPRVSVL 396 (1194)
Q Consensus 359 t~ii~~~q~~~~~~~~~D~vilL~~G~iv~~G~~~~~~ 396 (1194)
++|+.++|+.+++.+++|+|++|++|++++.|+++++.
T Consensus 216 ~tiiivtHd~~~~~~~adrv~vl~~G~i~~~g~~~~~~ 253 (305)
T PRK13651 216 KTIILVTHDLDNVLEWTKRTIFFKDGKIIKDGDTYDIL 253 (305)
T ss_pred CEEEEEeeCHHHHHHhCCEEEEEECCEEEEECCHHHHh
Confidence 55667889999999999999999999999999988864
No 250
>PRK09536 btuD corrinoid ABC transporter ATPase; Reviewed
Probab=100.00 E-value=3.7e-35 Score=342.33 Aligned_cols=209 Identities=27% Similarity=0.420 Sum_probs=175.8
Q ss_pred eeeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCceeeEEEECCccCCCCC---CCceEEEEecCCCCCCCC
Q 000997 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV---PPRTSAYVSQQDWQVAEM 224 (1194)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~~---~~~~~~yv~Q~d~~~~~l 224 (1194)
+++|+|+|+.+++||+++|+|||||||||||++|+|.++|. +|+|.++|.++.... .++.++||+|++.+++.+
T Consensus 16 ~~vL~~vs~~i~~Geiv~liGpNGaGKSTLLk~LaGll~p~---sG~I~l~G~~i~~~~~~~~~~~ig~v~q~~~l~~~~ 92 (402)
T PRK09536 16 TTVLDGVDLSVREGSLVGLVGPNGAGKTTLLRAINGTLTPT---AGTVLVAGDDVEALSARAASRRVASVPQDTSLSFEF 92 (402)
T ss_pred EEEEEeeEEEECCCCEEEEECCCCchHHHHHHHHhcCCCCC---CcEEEECCEEcCcCCHHHHhcceEEEccCCCCCCCC
Confidence 46999999999999999999999999999999999999876 999999998876543 246799999999888999
Q ss_pred CHHHHHHHhhhccCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhccCcchhHHHHHHHHHhCCcccccccccCccC
Q 000997 225 TVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEML 304 (1194)
Q Consensus 225 TV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~k~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~ 304 (1194)
||+||+.++..... + .+.. . ......+++++++.+||.+..++.+
T Consensus 93 tv~e~v~~~~~~~~-~-~~~~-------------~---------------~~~~~~~v~~~le~vgl~~~~~~~~----- 137 (402)
T PRK09536 93 DVRQVVEMGRTPHR-S-RFDT-------------W---------------TETDRAAVERAMERTGVAQFADRPV----- 137 (402)
T ss_pred CHHHHHHhccchhc-c-cccC-------------C---------------CHHHHHHHHHHHHHcCCchhhcCCh-----
Confidence 99999988532110 0 0000 0 0011235788999999988777665
Q ss_pred CCCChhhhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEcCC
Q 000997 305 KGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEG 384 (1194)
Q Consensus 305 ~~LSGGqkqRvsia~al~~~~~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~~G 384 (1194)
+.|||||||||.|||||+.+|++|+|||||+|||+.++.++.+.|+++++ . +++|+.++|..+++.++||++++|++|
T Consensus 138 ~~LSgGerQRv~IArAL~~~P~iLLLDEPtsgLD~~~~~~l~~lL~~l~~-~-g~TIIivsHdl~~~~~~adrii~l~~G 215 (402)
T PRK09536 138 TSLSGGERQRVLLARALAQATPVLLLDEPTASLDINHQVRTLELVRRLVD-D-GKTAVAAIHDLDLAARYCDELVLLADG 215 (402)
T ss_pred hhCCHHHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHh-c-CCEEEEEECCHHHHHHhCCEEEEEECC
Confidence 46999999999999999999999999999999999999999999999975 3 456666889999999999999999999
Q ss_pred eEEEecChhhHH
Q 000997 385 QIVYQGPRVSVL 396 (1194)
Q Consensus 385 ~iv~~G~~~~~~ 396 (1194)
++++.|+++++.
T Consensus 216 ~iv~~G~~~ev~ 227 (402)
T PRK09536 216 RVRAAGPPADVL 227 (402)
T ss_pred EEEEecCHHHHh
Confidence 999999998764
No 251
>PRK09473 oppD oligopeptide transporter ATP-binding component; Provisional
Probab=100.00 E-value=4.5e-35 Score=336.19 Aligned_cols=213 Identities=21% Similarity=0.259 Sum_probs=175.6
Q ss_pred eeeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCceeeEEEECCccCCCCCC-------CceEEEEecCC--
Q 000997 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVP-------PRTSAYVSQQD-- 218 (1194)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~~~-------~~~~~yv~Q~d-- 218 (1194)
..+|+|||++|++||+++|+|+||||||||+++|+|.+++....+|+|.|+|.++..... .+.++||+|++
T Consensus 29 ~~~l~~vsl~i~~Ge~~~ivG~sGsGKSTL~~~l~Gl~~p~~~~sG~I~~~G~~i~~~~~~~~~~~r~~~i~~v~Q~~~~ 108 (330)
T PRK09473 29 VTAVNDLNFSLRAGETLGIVGESGSGKSQTAFALMGLLAANGRIGGSATFNGREILNLPEKELNKLRAEQISMIFQDPMT 108 (330)
T ss_pred EEEEeeeEEEEcCCCEEEEECCCCchHHHHHHHHHcCCCCCCCCCeEEEECCEECCcCCHHHHHHHhcCCEEEEEcCchh
Confidence 569999999999999999999999999999999999997742348999999998765431 24799999998
Q ss_pred CCCCCCCHHHHHHHhhhccCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhccCcchhHHHHHHHHHhCCccccccc
Q 000997 219 WQVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTL 298 (1194)
Q Consensus 219 ~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~k~~~~~~~~~~~~~~~~l~~lgL~~~~dt~ 298 (1194)
.+.+.+||.+++.+.......... .+...++.++|+.+||++..++
T Consensus 109 ~l~p~~~v~~~i~~~~~~~~~~~~---------------------------------~~~~~~~~~~L~~vgL~~~~~~- 154 (330)
T PRK09473 109 SLNPYMRVGEQLMEVLMLHKGMSK---------------------------------AEAFEESVRMLDAVKMPEARKR- 154 (330)
T ss_pred hcCCCCCHHHHHHHHHHHhcCCCH---------------------------------HHHHHHHHHHHHHcCCCChHHH-
Confidence 678999999999765432210000 0012246778899999764322
Q ss_pred ccCccCCCCChhhhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeE
Q 000997 299 VGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDV 378 (1194)
Q Consensus 299 vg~~~~~~LSGGqkqRvsia~al~~~~~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~v 378 (1194)
+ +.+...|||||||||+||+||+.+|++|++||||+|||..++.+|.+.|+++.+.. +++++.++|+...+.+++|+|
T Consensus 155 ~-~~~p~~LSgG~~QRv~IArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~-g~til~iTHdl~~~~~~~Dri 232 (330)
T PRK09473 155 M-KMYPHEFSGGMRQRVMIAMALLCRPKLLIADEPTTALDVTVQAQIMTLLNELKREF-NTAIIMITHDLGVVAGICDKV 232 (330)
T ss_pred h-cCCcccCCHHHHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHHc-CCEEEEEECCHHHHHHhCCEE
Confidence 2 34567899999999999999999999999999999999999999999999987643 466777899999999999999
Q ss_pred EEEcCCeEEEecChhhHH
Q 000997 379 ILLSEGQIVYQGPRVSVL 396 (1194)
Q Consensus 379 ilL~~G~iv~~G~~~~~~ 396 (1194)
++|++|+|++.|+.+++.
T Consensus 233 ~vm~~G~ive~g~~~~i~ 250 (330)
T PRK09473 233 LVMYAGRTMEYGNARDVF 250 (330)
T ss_pred EEEECCEEEEECCHHHHH
Confidence 999999999999998875
No 252
>cd03256 ABC_PhnC_transporter ABC-type phosphate/phosphonate transport system. Phosphonates are a class of organophosphorus compounds characterized by a chemically stable carbon-to-phosphorus (C-P) bond. Phosphonates are widespread among naturally occurring compounds in all kingdoms of wildlife, but only procaryotic microorganisms are able to cleave this bond. Certain bacteria such as E. coli can use alkylphosphonates as a phosphorus source. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.4e-35 Score=326.35 Aligned_cols=213 Identities=27% Similarity=0.395 Sum_probs=172.2
Q ss_pred eeeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCceeeEEEECCccCCCCC------CCceEEEEecCCCCC
Q 000997 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV------PPRTSAYVSQQDWQV 221 (1194)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~~------~~~~~~yv~Q~d~~~ 221 (1194)
.++|+|+|+++++|++++|+||||||||||+++|+|.+++. +|+|.++|.++.... .++.++|++|++.++
T Consensus 14 ~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~i~~~~q~~~~~ 90 (241)
T cd03256 14 KKALKDVSLSINPGEFVALIGPSGAGKSTLLRCLNGLVEPT---SGSVLIDGTDINKLKGKALRQLRRQIGMIFQQFNLI 90 (241)
T ss_pred cEEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCC---CceEEECCEeccccCHhHHHHHHhccEEEcccCccc
Confidence 46999999999999999999999999999999999998775 999999998875432 135799999999889
Q ss_pred CCCCHHHHHHHhhhccCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhccCcchhHHHHHHHHHhCCcccccccccC
Q 000997 222 AEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGD 301 (1194)
Q Consensus 222 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~k~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 301 (1194)
+.+||+||+.++..... .... . ..+... ......++.+++.+||.+..++.+
T Consensus 91 ~~~tv~~~l~~~~~~~~--~~~~---~------~~~~~~---------------~~~~~~~~~~l~~~~l~~~~~~~~-- 142 (241)
T cd03256 91 ERLSVLENVLSGRLGRR--STWR---S------LFGLFP---------------KEEKQRALAALERVGLLDKAYQRA-- 142 (241)
T ss_pred ccCcHHHHHHhhhcccc--hhhh---h------hcccCc---------------HHHHHHHHHHHHHcCChhhhCCCc--
Confidence 99999999987532110 0000 0 000000 001234677899999987666554
Q ss_pred ccCCCCChhhhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEE
Q 000997 302 EMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILL 381 (1194)
Q Consensus 302 ~~~~~LSGGqkqRvsia~al~~~~~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL 381 (1194)
..|||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|+++++.. +++|+.++|+.+++.+++|+|++|
T Consensus 143 ---~~LS~G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~-~~tii~~tH~~~~~~~~~d~v~~l 218 (241)
T cd03256 143 ---DQLSGGQQQRVAIARALMQQPKLILADEPVASLDPASSRQVMDLLKRINREE-GITVIVSLHQVDLAREYADRIVGL 218 (241)
T ss_pred ---ccCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHHHhc-CCEEEEEeCCHHHHHHhCCEEEEE
Confidence 4699999999999999999999999999999999999999999999987533 445666888899999999999999
Q ss_pred cCCeEEEecChhhH
Q 000997 382 SEGQIVYQGPRVSV 395 (1194)
Q Consensus 382 ~~G~iv~~G~~~~~ 395 (1194)
++|++++.|+.+++
T Consensus 219 ~~G~i~~~~~~~~~ 232 (241)
T cd03256 219 KDGRIVFDGPPAEL 232 (241)
T ss_pred ECCEEEeecCHHHh
Confidence 99999999998775
No 253
>PRK10584 putative ABC transporter ATP-binding protein YbbA; Provisional
Probab=100.00 E-value=3.7e-35 Score=321.95 Aligned_cols=196 Identities=27% Similarity=0.381 Sum_probs=165.0
Q ss_pred eEEeeeeeEEEeCCcEEEEEccCCCChHHHHhhhcCCCCCCeeEEEEEEcCccCChh---c---c-cceeeEeecCCCCC
Q 000997 842 LQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQE---T---F-ARISGYCEQNDIHS 914 (1194)
Q Consensus 842 ~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~---~---~-~~~~gyv~Q~~~~~ 914 (1194)
..+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+.... . . ++.++|++|++.++
T Consensus 23 ~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~--p~~G~i~~~g~~~~~~~~~~~~~~~~~~i~~~~q~~~l~ 100 (228)
T PRK10584 23 LSILTGVELVVKRGETIALIGESGSGKSTLLAILAGLDD--GSSGEVSLVGQPLHQMDEEARAKLRAKHVGFVFQSFMLI 100 (228)
T ss_pred eEEEeccEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCC--CCCeeEEECCEEcccCCHHHHHHHHhheEEEEEcccccC
Confidence 369999999999999999999999999999999999876 4689999999876421 1 1 35799999999888
Q ss_pred CCCcHHHHHHHHhhhcCCCcCcHHHHHHHHHHHHHHcCCCcccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeC
Q 000997 915 PGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDE 994 (1194)
Q Consensus 915 ~~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illLDE 994 (1194)
+.+|+.||+.+....+. .......+.+.++++.+++.+..+..+ ..||||||||++||++|+.+|++|+|||
T Consensus 101 ~~~tv~~~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~Ge~qrl~la~al~~~p~llllDE 172 (228)
T PRK10584 101 PTLNALENVELPALLRG---ESSRQSRNGAKALLEQLGLGKRLDHLP-----AQLSGGEQQRVALARAFNGRPDVLFADE 172 (228)
T ss_pred CCcCHHHHHHHHHHhcC---CCHHHHHHHHHHHHHHcCCHhHhhCCh-----hhCCHHHHHHHHHHHHHhcCCCEEEEeC
Confidence 99999999987654321 223344567888999999987666543 5799999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCeEEEEccCcEEEE
Q 000997 995 PTSGLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIY 1050 (1194)
Q Consensus 995 PTsgLD~~~~~~i~~~l~~l~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~ 1050 (1194)
||+|||+.+...+.+.|++++++ |.|||+++|+++ .+ +.+|++++|++ |+++.
T Consensus 173 Pt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~-~~-~~~d~i~~l~~-g~i~~ 226 (228)
T PRK10584 173 PTGNLDRQTGDKIADLLFSLNREHGTTLILVTHDLQ-LA-ARCDRRLRLVN-GQLQE 226 (228)
T ss_pred CCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHH-HH-HhCCEEEEEEC-CEEEe
Confidence 99999999999999999999754 899999999986 34 56999999985 67764
No 254
>PRK13639 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.1e-35 Score=330.02 Aligned_cols=202 Identities=28% Similarity=0.354 Sum_probs=169.9
Q ss_pred eEEeeeeeEEEeCCcEEEEEccCCCChHHHHhhhcCCCCCCeeEEEEEEcCccCCh-----hcccceeeEeecCCC-CCC
Q 000997 842 LQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ-----ETFARISGYCEQNDI-HSP 915 (1194)
Q Consensus 842 ~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~-----~~~~~~~gyv~Q~~~-~~~ 915 (1194)
+.+|+|||+++++||++||+||||||||||+++|+|..+ +.+|+|.++|.++.. ...++.++|++|++. .+.
T Consensus 15 ~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~--~~~G~i~~~g~~~~~~~~~~~~~~~~i~~v~q~~~~~~~ 92 (275)
T PRK13639 15 TEALKGINFKAEKGEMVALLGPNGAGKSTLFLHFNGILK--PTSGEVLIKGEPIKYDKKSLLEVRKTVGIVFQNPDDQLF 92 (275)
T ss_pred CeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCccEEEECCEECccccchHHHHHhheEEEeeChhhhhc
Confidence 469999999999999999999999999999999999876 458999999987631 124567999999963 334
Q ss_pred CCcHHHHHHHHhhhcCCCcCcHHHHHHHHHHHHHHcCCCcccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCC
Q 000997 916 GLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEP 995 (1194)
Q Consensus 916 ~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEP 995 (1194)
..||.||+.+..... .....+..+.+.++++.+++.+..+..+ ..||||||||++|||+|+.+|++|+||||
T Consensus 93 ~~tv~e~i~~~~~~~---~~~~~~~~~~~~~~l~~~~L~~~~~~~~-----~~LS~Gq~qrv~laral~~~p~llllDEP 164 (275)
T PRK13639 93 APTVEEDVAFGPLNL---GLSKEEVEKRVKEALKAVGMEGFENKPP-----HHLSGGQKKRVAIAGILAMKPEIIVLDEP 164 (275)
T ss_pred cccHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHCCCchhhcCCh-----hhCCHHHHHHHHHHHHHhcCCCEEEEeCC
Confidence 579999998764321 1223344456788999999987777653 58999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCeEEEEccCcEEEEeCCCC
Q 000997 996 TSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLG 1055 (1194)
Q Consensus 996 TsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~~ 1055 (1194)
|+|||+.++..+++.|+++.++|.|||+++|+++ .+.+.||++++|++ |+++..|+..
T Consensus 165 t~gLD~~~~~~l~~~l~~l~~~~~til~vtH~~~-~~~~~~d~i~~l~~-G~i~~~g~~~ 222 (275)
T PRK13639 165 TSGLDPMGASQIMKLLYDLNKEGITIIISTHDVD-LVPVYADKVYVMSD-GKIIKEGTPK 222 (275)
T ss_pred CcCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHH-HHHHhCCEEEEEEC-CEEEEeCCHH
Confidence 9999999999999999999877999999999976 46678999999985 7999988753
No 255
>PRK09473 oppD oligopeptide transporter ATP-binding component; Provisional
Probab=100.00 E-value=4.8e-35 Score=335.94 Aligned_cols=209 Identities=21% Similarity=0.257 Sum_probs=171.3
Q ss_pred ceEEeeeeeEEEeCCcEEEEEccCCCChHHHHhhhcCCCCCC-eeEEEEEEcCccCCh---hc---c-cceeeEeecCC-
Q 000997 841 RLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGG-IIEGDIYISGYPKRQ---ET---F-ARISGYCEQND- 911 (1194)
Q Consensus 841 ~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~-~~~G~i~i~g~~~~~---~~---~-~~~~gyv~Q~~- 911 (1194)
...+|+||||+|++||++||+|+||||||||+++|+|...+. ..+|+|.++|.++.. .. + ++.++||+|++
T Consensus 28 ~~~~l~~vsl~i~~Ge~~~ivG~sGsGKSTL~~~l~Gl~~p~~~~sG~I~~~G~~i~~~~~~~~~~~r~~~i~~v~Q~~~ 107 (330)
T PRK09473 28 DVTAVNDLNFSLRAGETLGIVGESGSGKSQTAFALMGLLAANGRIGGSATFNGREILNLPEKELNKLRAEQISMIFQDPM 107 (330)
T ss_pred CEEEEeeeEEEEcCCCEEEEECCCCchHHHHHHHHHcCCCCCCCCCeEEEECCEECCcCCHHHHHHHhcCCEEEEEcCch
Confidence 357999999999999999999999999999999999987531 238999999987642 11 2 24799999998
Q ss_pred -CCCCCCcHHHHHHHHhhhcCCCcCcHHHHHHHHHHHHHHcCCCcccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCEE
Q 000997 912 -IHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIV 990 (1194)
Q Consensus 912 -~~~~~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~il 990 (1194)
.+.|.+|+.+++.+...... .....+..+++.++++.++|.+..+..- ..+.+|||||||||+||+||+.+|+||
T Consensus 108 ~~l~p~~~v~~~i~~~~~~~~--~~~~~~~~~~~~~~L~~vgL~~~~~~~~--~~p~~LSgG~~QRv~IArAL~~~P~ll 183 (330)
T PRK09473 108 TSLNPYMRVGEQLMEVLMLHK--GMSKAEAFEESVRMLDAVKMPEARKRMK--MYPHEFSGGMRQRVMIAMALLCRPKLL 183 (330)
T ss_pred hhcCCCCCHHHHHHHHHHHhc--CCCHHHHHHHHHHHHHHcCCCChHHHhc--CCcccCCHHHHHHHHHHHHHHcCCCEE
Confidence 57899999999987644332 2334455567888899999865332211 124689999999999999999999999
Q ss_pred EEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCeEEEEccCcEEEEeCCCC
Q 000997 991 FMDEPTSGLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLG 1055 (1194)
Q Consensus 991 lLDEPTsgLD~~~~~~i~~~l~~l~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~~ 1055 (1194)
++||||+|||+.++..|+++|+++.++ |.|||++|||++ .+.+.+|++++|. +|+++..|+..
T Consensus 184 ilDEPts~LD~~~~~~i~~lL~~l~~~~g~til~iTHdl~-~~~~~~Dri~vm~-~G~ive~g~~~ 247 (330)
T PRK09473 184 IADEPTTALDVTVQAQIMTLLNELKREFNTAIIMITHDLG-VVAGICDKVLVMY-AGRTMEYGNAR 247 (330)
T ss_pred EEeCCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEECCHH-HHHHhCCEEEEEE-CCEEEEECCHH
Confidence 999999999999999999999999765 999999999976 4567899999998 58999999853
No 256
>PRK10744 pstB phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.8e-35 Score=327.21 Aligned_cols=216 Identities=23% Similarity=0.299 Sum_probs=174.2
Q ss_pred ceeEeecceeeeecccccccccccccceEEeeeeeEEEeCCcEEEEEccCCCChHHHHhhhcCCCC--C-CeeEEEEEEc
Q 000997 815 LSMAFGNINYFVDVPVELKQEGVLEDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKT--G-GIIEGDIYIS 891 (1194)
Q Consensus 815 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~--~-~~~~G~i~i~ 891 (1194)
..+.++|+++.+ ++..+|+|+|++|++||++||+||||||||||+++|+|... + .+.+|+|.++
T Consensus 12 ~~l~~~~l~~~~-------------~~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~p~~G~i~~~ 78 (260)
T PRK10744 12 SKIQVRNLNFYY-------------GKFHALKNINLDIAKNQVTAFIGPSGCGKSTLLRTFNRMYELYPEQRAEGEILLD 78 (260)
T ss_pred ceEEEEEEEEEe-------------CCeEEeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCcceEEEEC
Confidence 346677776654 23469999999999999999999999999999999999853 1 1358999999
Q ss_pred CccCCh-----hcccceeeEeecCCCCCCCCcHHHHHHHHhhhcCCCcCcHHHHHHHHHHHHHHcCCCc----ccCCccc
Q 000997 892 GYPKRQ-----ETFARISGYCEQNDIHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTS----LSGALIG 962 (1194)
Q Consensus 892 g~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~----~~~~~~~ 962 (1194)
|.++.. ..+++.++|++|++.+++ .|++||+.+...... ........+.++++++.+++.+ ..+..
T Consensus 79 g~~~~~~~~~~~~~~~~i~~~~q~~~~~~-~tv~~nl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~-- 153 (260)
T PRK10744 79 GENILTPKQDIALLRAKVGMVFQKPTPFP-MSIYDNIAFGVRLFE--KLSRAEMDERVEWALTKAALWNEVKDKLHQS-- 153 (260)
T ss_pred CEEccccccchHHHhcceEEEecCCccCc-CcHHHHHhhhHhhcC--CCCHHHHHHHHHHHHHHcCCChhhHHHHhcC--
Confidence 987631 234667999999988877 899999987653221 1223334456788999998742 22322
Q ss_pred CCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCeEEEE
Q 000997 963 LPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFM 1042 (1194)
Q Consensus 963 ~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~~d~~~~l 1042 (1194)
+..||||||||++||+||+.+|+||+|||||+|||+.++..+.+.|+++. ++.|||++||+++ .+.+.+|++++|
T Consensus 154 ---~~~LS~Gq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~-~~~tiii~sH~~~-~~~~~~d~i~~l 228 (260)
T PRK10744 154 ---GYSLSGGQQQRLCIARGIAIRPEVLLLDEPCSALDPISTGRIEELITELK-QDYTVVIVTHNMQ-QAARCSDYTAFM 228 (260)
T ss_pred ---CCCCCHHHHHHHHHHHHHHCCCCEEEEcCCCccCCHHHHHHHHHHHHHHh-cCCeEEEEeCCHH-HHHHhCCEEEEE
Confidence 35899999999999999999999999999999999999999999999985 4789999999976 466789999999
Q ss_pred ccCcEEEEeCCC
Q 000997 1043 KRGGELIYAGPL 1054 (1194)
Q Consensus 1043 ~~gG~~~~~g~~ 1054 (1194)
+ +|+++..|+.
T Consensus 229 ~-~G~i~~~g~~ 239 (260)
T PRK10744 229 Y-LGELIEFGNT 239 (260)
T ss_pred E-CCEEEEeCCH
Confidence 8 5799988874
No 257
>PRK11022 dppD dipeptide transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.7e-35 Score=336.61 Aligned_cols=207 Identities=18% Similarity=0.254 Sum_probs=169.6
Q ss_pred eEEeeeeeEEEeCCcEEEEEccCCCChHHHHhhhcCCCCC-C-eeEEEEEEcCccCCh---hc----ccceeeEeecCC-
Q 000997 842 LQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTG-G-IIEGDIYISGYPKRQ---ET----FARISGYCEQND- 911 (1194)
Q Consensus 842 ~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~-~-~~~G~i~i~g~~~~~---~~----~~~~~gyv~Q~~- 911 (1194)
..+|+||||+|++||++||+|+||||||||+++|+|..+. + +.+|+|.++|.++.. .. +++.++||+|++
T Consensus 20 ~~~l~~vsl~i~~Ge~~~lvG~sGsGKSTL~~~l~Gll~~~~~~~~G~i~~~G~~i~~~~~~~~~~~r~~~i~~v~Q~~~ 99 (326)
T PRK11022 20 FRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISEKERRNLVGAEVAMIFQDPM 99 (326)
T ss_pred EEEEeeeEEEECCCCEEEEECCCCChHHHHHHHHHcCCCCCCCCcceEEEECCEECCcCCHHHHHHHhCCCEEEEecCch
Confidence 5799999999999999999999999999999999997642 1 468999999987642 11 124699999998
Q ss_pred -CCCCCCcHHHHHHHHhhhcCCCcCcHHHHHHHHHHHHHHcCCCcccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCEE
Q 000997 912 -IHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIV 990 (1194)
Q Consensus 912 -~~~~~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~il 990 (1194)
.+.|.+|+.+++........ .....+..+.+.++++.++|.+..+.... .+.+|||||||||+||+||+.+|+||
T Consensus 100 ~~l~p~~~v~~~i~~~l~~~~--~~~~~~~~~~~~~~L~~~gL~~~~~~l~~--~p~~LSgGq~QRv~iArAL~~~P~ll 175 (326)
T PRK11022 100 TSLNPCYTVGFQIMEAIKVHQ--GGNKKTRRQRAIDLLNQVGIPDPASRLDV--YPHQLSGGMSQRVMIAMAIACRPKLL 175 (326)
T ss_pred hhcCCcCCHHHHHHHHHHHhc--CCCHHHHHHHHHHHHHHCCCCChHHHHhC--CchhCCHHHHHHHHHHHHHHhCCCEE
Confidence 46788999998876543321 12344556778899999999753221111 23689999999999999999999999
Q ss_pred EEeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCCcHHHHHhcCeEEEEccCcEEEEeCCC
Q 000997 991 FMDEPTSGLDARAAAIVMRTVRNIVN-TGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1194)
Q Consensus 991 lLDEPTsgLD~~~~~~i~~~l~~l~~-~g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~ 1054 (1194)
++||||+|||+.++..+++.|+++.+ .|.|||++|||++ .+.+.+|++++|. +|+++..|+.
T Consensus 176 ilDEPts~LD~~~~~~il~lL~~l~~~~g~til~iTHdl~-~~~~~adri~vm~-~G~ive~g~~ 238 (326)
T PRK11022 176 IADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLA-LVAEAAHKIIVMY-AGQVVETGKA 238 (326)
T ss_pred EEeCCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEE-CCEEEEECCH
Confidence 99999999999999999999999976 5999999999976 4667899999998 5899999985
No 258
>PRK13631 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4e-35 Score=335.15 Aligned_cols=216 Identities=22% Similarity=0.383 Sum_probs=173.6
Q ss_pred eeeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCceeeEEEECCccCCCC-------------------CCC
Q 000997 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEF-------------------VPP 208 (1194)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~-------------------~~~ 208 (1194)
.++|+|||++|++|++++|+||||||||||+++|+|.+++. +|+|+++|.++.+. ..+
T Consensus 39 ~~~L~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~L~Gl~~p~---~G~I~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 115 (320)
T PRK13631 39 LVALNNISYTFEKNKIYFIIGNSGSGKSTLVTHFNGLIKSK---YGTIQVGDIYIGDKKNNHELITNPYSKKIKNFKELR 115 (320)
T ss_pred ccceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CCeEEECCEEcccccccccccccccccccchHHHHH
Confidence 35999999999999999999999999999999999999876 99999999876432 124
Q ss_pred ceEEEEecCC--CCCCCCCHHHHHHHhhhccCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhccCcchhHHHHHHH
Q 000997 209 RTSAYVSQQD--WQVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIM 286 (1194)
Q Consensus 209 ~~~~yv~Q~d--~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~k~~~~~~~~~~~~~~~~l 286 (1194)
+.++||+|++ .+++ .||+||+.|+....+.. . .+...++++++
T Consensus 116 ~~ig~v~Q~~~~~l~~-~tv~eni~~~~~~~~~~-~---------------------------------~~~~~~~~~~l 160 (320)
T PRK13631 116 RRVSMVFQFPEYQLFK-DTIEKDIMFGPVALGVK-K---------------------------------SEAKKLAKFYL 160 (320)
T ss_pred hcEEEEEECchhcccc-chHHHHHHhhHHhcCCC-H---------------------------------HHHHHHHHHHH
Confidence 6799999986 4454 59999998864321110 0 00112467789
Q ss_pred HHhCCc-ccccccccCccCCCCChhhhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEe
Q 000997 287 KILGLD-TCADTLVGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLL 365 (1194)
Q Consensus 287 ~~lgL~-~~~dt~vg~~~~~~LSGGqkqRvsia~al~~~~~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~ 365 (1194)
+.+||+ ...++. +..|||||||||+|||||+.+|++|+|||||+|||+.++..+.+.|+++... +++|+.++
T Consensus 161 ~~~gL~~~~~~~~-----~~~LSgGqkqRvaiAraL~~~p~iLLLDEPtsgLD~~~~~~l~~~L~~l~~~--g~Tiiivt 233 (320)
T PRK13631 161 NKMGLDDSYLERS-----PFGLSGGQKRRVAIAGILAIQPEILIFDEPTAGLDPKGEHEMMQLILDAKAN--NKTVFVIT 233 (320)
T ss_pred HHcCCChhHhcCC-----cccCCHHHHHHHHHHHHHHcCCCEEEEECCccCCCHHHHHHHHHHHHHHHHC--CCEEEEEe
Confidence 999996 444443 4579999999999999999999999999999999999999999999988642 45666688
Q ss_pred cChhHHHhhcCeEEEEcCCeEEEecChhhHH---HHHHhcCCCCCC
Q 000997 366 QPAPEAYELFDDVILLSEGQIVYQGPRVSVL---DFFASMGFSCPK 408 (1194)
Q Consensus 366 q~~~~~~~~~D~vilL~~G~iv~~G~~~~~~---~~F~~~G~~cp~ 408 (1194)
|..+++..++|+|++|++|++++.|+++++. ..++..|..+|.
T Consensus 234 Hd~~~~~~~adri~vl~~G~i~~~g~~~~~~~~~~~~~~~~~~~p~ 279 (320)
T PRK13631 234 HTMEHVLEVADEVIVMDKGKILKTGTPYEIFTDQHIINSTSIQVPR 279 (320)
T ss_pred cCHHHHHHhCCEEEEEECCEEEEeCCHHHHhcCHHHHHHcCCCCCh
Confidence 9999999999999999999999999998764 234445555544
No 259
>TIGR03415 ABC_choXWV_ATP choline ABC transporter, ATP-binding protein. Members of this protein family are the ATP-binding subunit of a three-protein transporter. This family belongs, more broadly, to the family of proline and glycine-betaine transporters, but members have been identified by direct characterization and by bioinformatic means as choline transporters. Many species have several closely-related members of this family, probably with variable abilities to act additionally on related quaternary amines.
Probab=100.00 E-value=3.1e-35 Score=340.26 Aligned_cols=208 Identities=23% Similarity=0.289 Sum_probs=175.8
Q ss_pred cceeeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCceeeEEEECCc----cCCCCCC-------CceEEEE
Q 000997 146 SKLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGH----GFKEFVP-------PRTSAYV 214 (1194)
Q Consensus 146 ~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~----~~~~~~~-------~~~~~yv 214 (1194)
....+|+|+|++|++||+++|+||||||||||+++|+|.++|. +|+|+++|. ++..... ++.++||
T Consensus 35 g~~~~l~~vsf~i~~Gei~~I~G~nGsGKSTLlr~L~Gl~~p~---~G~I~idG~~~~~~i~~~~~~~l~~~r~~~i~~v 111 (382)
T TIGR03415 35 GLVVGVANASLDIEEGEICVLMGLSGSGKSSLLRAVNGLNPVS---RGSVLVKDGDGSIDVANCDAATLRRLRTHRVSMV 111 (382)
T ss_pred CCEEEEEeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCC---CcEEEECCEecccccccCCHHHHHHHhcCCEEEE
Confidence 3467999999999999999999999999999999999999876 999999996 3322211 2479999
Q ss_pred ecCCCCCCCCCHHHHHHHhhhccCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhccCcchhHHHHHHHHHhCCccc
Q 000997 215 SQQDWQVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTC 294 (1194)
Q Consensus 215 ~Q~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~k~~~~~~~~~~~~~~~~l~~lgL~~~ 294 (1194)
+|++.+++.+||+||+.|+....+... .+.+..++++++.+||.+.
T Consensus 112 fQ~~~l~p~~Tv~eNi~~~~~~~g~~~----------------------------------~~~~~~a~e~le~vgL~~~ 157 (382)
T TIGR03415 112 FQKFALMPWLTVEENVAFGLEMQGMPE----------------------------------AERRKRVDEQLELVGLAQW 157 (382)
T ss_pred ECCCcCCCCCcHHHHHHHHHHhcCCCH----------------------------------HHHHHHHHHHHHHcCCchh
Confidence 999999999999999998754332110 0012347788999999887
Q ss_pred ccccccCccCCCCChhhhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhh
Q 000997 295 ADTLVGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYEL 374 (1194)
Q Consensus 295 ~dt~vg~~~~~~LSGGqkqRvsia~al~~~~~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~ 374 (1194)
.|..++ .|||||||||+|||||+.+|+||+|||||+|||+.++.++.+.|+++.+.. +++|+.++|+.+++.++
T Consensus 158 ~~~~~~-----~LSgGq~QRV~LARALa~~P~ILLlDEPts~LD~~~r~~l~~~L~~l~~~~-~~TII~iTHdl~e~~~l 231 (382)
T TIGR03415 158 ADKKPG-----ELSGGMQQRVGLARAFAMDADILLMDEPFSALDPLIRTQLQDELLELQAKL-NKTIIFVSHDLDEALKI 231 (382)
T ss_pred hcCChh-----hCCHHHHHHHHHHHHHhcCCCEEEEECCCccCCHHHHHHHHHHHHHHHHhc-CCEEEEEeCCHHHHHHh
Confidence 776654 599999999999999999999999999999999999999999999987644 45566688999999999
Q ss_pred cCeEEEEcCCeEEEecChhhHH
Q 000997 375 FDDVILLSEGQIVYQGPRVSVL 396 (1194)
Q Consensus 375 ~D~vilL~~G~iv~~G~~~~~~ 396 (1194)
+|+|++|++|+++..|+++++.
T Consensus 232 ~DrI~vl~~G~iv~~g~~~ei~ 253 (382)
T TIGR03415 232 GNRIAIMEGGRIIQHGTPEEIV 253 (382)
T ss_pred CCEEEEEECCEEEEecCHHHHh
Confidence 9999999999999999988874
No 260
>PRK09493 glnQ glutamine ABC transporter ATP-binding protein; Reviewed
Probab=100.00 E-value=6e-35 Score=322.80 Aligned_cols=205 Identities=20% Similarity=0.329 Sum_probs=171.4
Q ss_pred eeeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCceeeEEEECCccCCCC-----CCCceEEEEecCCCCCC
Q 000997 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEF-----VPPRTSAYVSQQDWQVA 222 (1194)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~-----~~~~~~~yv~Q~d~~~~ 222 (1194)
+++|+|+|+++++||+++|+||||||||||+++|+|.+++. +|+|.++|.++... ..++.++|++|++..++
T Consensus 14 ~~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~~~ 90 (240)
T PRK09493 14 TQVLHNIDLNIDQGEVVVIIGPSGSGKSTLLRCINKLEEIT---SGDLIVDGLKVNDPKVDERLIRQEAGMVFQQFYLFP 90 (240)
T ss_pred eEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEECCcCChhHHHHhhceEEEecccccCC
Confidence 36999999999999999999999999999999999998776 99999999887542 12457999999998899
Q ss_pred CCCHHHHHHHhhhc-cCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhccCcchhHHHHHHHHHhCCcccccccccC
Q 000997 223 EMTVRETLDFAGQC-QGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGD 301 (1194)
Q Consensus 223 ~lTV~E~l~f~~~~-~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~k~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 301 (1194)
.+||+||+.|+... .+.. . .+....++++++.+||++..|..+
T Consensus 91 ~~tv~~~l~~~~~~~~~~~--~--------------------------------~~~~~~~~~~l~~~gl~~~~~~~~-- 134 (240)
T PRK09493 91 HLTALENVMFGPLRVRGAS--K--------------------------------EEAEKQARELLAKVGLAERAHHYP-- 134 (240)
T ss_pred CCcHHHHHHhHHHHhcCCC--H--------------------------------HHHHHHHHHHHHHcCChHHHhcCh--
Confidence 99999999875321 1100 0 001224678899999987666654
Q ss_pred ccCCCCChhhhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEE
Q 000997 302 EMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILL 381 (1194)
Q Consensus 302 ~~~~~LSGGqkqRvsia~al~~~~~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL 381 (1194)
+.|||||||||+||+|++.+|++++|||||+|||..++..+.+.|+++++. +++|+.++|+.+++..++|++++|
T Consensus 135 ---~~LS~G~~qrv~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~--~~tiii~sH~~~~~~~~~d~i~~l 209 (240)
T PRK09493 135 ---SELSGGQQQRVAIARALAVKPKLMLFDEPTSALDPELRHEVLKVMQDLAEE--GMTMVIVTHEIGFAEKVASRLIFI 209 (240)
T ss_pred ---hhcCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHc--CCEEEEEeCCHHHHHHhCCEEEEE
Confidence 469999999999999999999999999999999999999999999988642 455666888889999999999999
Q ss_pred cCCeEEEecChhhHH
Q 000997 382 SEGQIVYQGPRVSVL 396 (1194)
Q Consensus 382 ~~G~iv~~G~~~~~~ 396 (1194)
++|++++.|+.+++.
T Consensus 210 ~~G~i~~~g~~~~~~ 224 (240)
T PRK09493 210 DKGRIAEDGDPQVLI 224 (240)
T ss_pred ECCEEEeeCCHHHHh
Confidence 999999999987763
No 261
>COG4175 ProV ABC-type proline/glycine betaine transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=5.6e-36 Score=319.29 Aligned_cols=202 Identities=24% Similarity=0.314 Sum_probs=182.6
Q ss_pred eEEeeeeeEEEeCCcEEEEEccCCCChHHHHhhhcCCCCCCeeEEEEEEcCccCCh-------hcccceeeEeecCCCCC
Q 000997 842 LQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ-------ETFARISGYCEQNDIHS 914 (1194)
Q Consensus 842 ~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~-------~~~~~~~gyv~Q~~~~~ 914 (1194)
..-++|+|++++.||++.|||-||||||||+++|.++.. +..|+|+++|.++.. .-.++.+++|+|+..++
T Consensus 41 vvGv~~~sl~v~~GeIfViMGLSGSGKSTLvR~~NrLie--pt~G~ilv~g~di~~~~~~~Lr~~Rr~~~sMVFQ~FaLl 118 (386)
T COG4175 41 VVGVNDASLDVEEGEIFVIMGLSGSGKSTLVRLLNRLIE--PTRGEILVDGKDIAKLSAAELRELRRKKISMVFQSFALL 118 (386)
T ss_pred EEeeccceeeecCCeEEEEEecCCCCHHHHHHHHhccCC--CCCceEEECCcchhcCCHHHHHHHHhhhhhhhhhhhccc
Confidence 456789999999999999999999999999999999877 578999999987532 12356799999999999
Q ss_pred CCCcHHHHHHHHhhhcCCCcCcHHHHHHHHHHHHHHcCCCcccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeC
Q 000997 915 PGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDE 994 (1194)
Q Consensus 915 ~~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illLDE 994 (1194)
|+.||.||+.|+..++ .++.+++++++.++++.+||.+.++.+. .+||||+||||.|||||+.+|+||+|||
T Consensus 119 PhrtVl~Nv~fGLev~---Gv~~~er~~~a~~~l~~VgL~~~~~~yp-----~eLSGGMqQRVGLARAla~~~~IlLMDE 190 (386)
T COG4175 119 PHRTVLENVAFGLEVQ---GVPKAEREERALEALELVGLEGYADKYP-----NELSGGMQQRVGLARALANDPDILLMDE 190 (386)
T ss_pred cchhHhhhhhcceeec---CCCHHHHHHHHHHHHHHcCchhhhhcCc-----ccccchHHHHHHHHHHHccCCCEEEecC
Confidence 9999999999998776 4678889999999999999999998864 6899999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCeEEEEccCcEEEEeCCCC
Q 000997 995 PTSGLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLG 1055 (1194)
Q Consensus 995 PTsgLD~~~~~~i~~~l~~l~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~~ 1055 (1194)
|+|.|||--+..+++.|.+|.++ ++|||++|||.+ +.++.-|||.+|+ +|+++-.|.+.
T Consensus 191 aFSALDPLIR~~mQdeLl~Lq~~l~KTIvFitHDLd-EAlriG~rIaimk-dG~ivQ~Gtp~ 250 (386)
T COG4175 191 AFSALDPLIRTEMQDELLELQAKLKKTIVFITHDLD-EALRIGDRIAIMK-DGEIVQVGTPE 250 (386)
T ss_pred chhhcChHHHHHHHHHHHHHHHHhCCeEEEEecCHH-HHHhccceEEEec-CCeEEEeCCHH
Confidence 99999999999999999999755 899999999997 7889999999998 68999999864
No 262
>COG4175 ProV ABC-type proline/glycine betaine transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=7.8e-36 Score=318.17 Aligned_cols=222 Identities=23% Similarity=0.328 Sum_probs=193.9
Q ss_pred ceeeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCceeeEEEECCccCCCCCC-------CceEEEEecCCC
Q 000997 147 KLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVP-------PRTSAYVSQQDW 219 (1194)
Q Consensus 147 ~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~~~-------~~~~~yv~Q~d~ 219 (1194)
...-++|+|+.++.||+..|||=||||||||+++|.++.+|+ +|+|.++|.++..... ++.+++|+|+..
T Consensus 40 ~vvGv~~~sl~v~~GeIfViMGLSGSGKSTLvR~~NrLiept---~G~ilv~g~di~~~~~~~Lr~~Rr~~~sMVFQ~Fa 116 (386)
T COG4175 40 LVVGVNDASLDVEEGEIFVIMGLSGSGKSTLVRLLNRLIEPT---RGEILVDGKDIAKLSAAELRELRRKKISMVFQSFA 116 (386)
T ss_pred cEEeeccceeeecCCeEEEEEecCCCCHHHHHHHHhccCCCC---CceEEECCcchhcCCHHHHHHHHhhhhhhhhhhhc
Confidence 345789999999999999999999999999999999999886 9999999998766542 467999999999
Q ss_pred CCCCCCHHHHHHHhhhccCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhccCcchhHHHHHHHHHhCCcccccccc
Q 000997 220 QVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLV 299 (1194)
Q Consensus 220 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~k~~~~~~~~~~~~~~~~l~~lgL~~~~dt~v 299 (1194)
++|+.||.||..|+.+.+|.... +.+.++.+.|+..||....+...
T Consensus 117 LlPhrtVl~Nv~fGLev~Gv~~~----------------------------------er~~~a~~~l~~VgL~~~~~~yp 162 (386)
T COG4175 117 LLPHRTVLENVAFGLEVQGVPKA----------------------------------EREERALEALELVGLEGYADKYP 162 (386)
T ss_pred cccchhHhhhhhcceeecCCCHH----------------------------------HHHHHHHHHHHHcCchhhhhcCc
Confidence 99999999999999998875421 12345788999999999888765
Q ss_pred cCccCCCCChhhhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEE
Q 000997 300 GDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVI 379 (1194)
Q Consensus 300 g~~~~~~LSGGqkqRvsia~al~~~~~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vi 379 (1194)
..||||+||||.|||||+.+|+||+||||+|+|||--+.++.+.|.++.+.+++| |+.++|+.+|++.+.|||.
T Consensus 163 -----~eLSGGMqQRVGLARAla~~~~IlLMDEaFSALDPLIR~~mQdeLl~Lq~~l~KT-IvFitHDLdEAlriG~rIa 236 (386)
T COG4175 163 -----NELSGGMQQRVGLARALANDPDILLMDEAFSALDPLIRTEMQDELLELQAKLKKT-IVFITHDLDEALRIGDRIA 236 (386)
T ss_pred -----ccccchHHHHHHHHHHHccCCCEEEecCchhhcChHHHHHHHHHHHHHHHHhCCe-EEEEecCHHHHHhccceEE
Confidence 4699999999999999999999999999999999999999999999988877655 5568999999999999999
Q ss_pred EEcCCeEEEecChhhHHHHHHhcCCCCCCCCChhHHHHhh
Q 000997 380 LLSEGQIVYQGPRVSVLDFFASMGFSCPKRKNVADFLQEV 419 (1194)
Q Consensus 380 lL~~G~iv~~G~~~~~~~~F~~~G~~cp~~~~~adfl~~v 419 (1194)
+|.+|+|+..|++++++. .|...-+++|...+
T Consensus 237 imkdG~ivQ~Gtp~eIl~--------~PAndYV~~Fv~~v 268 (386)
T COG4175 237 IMKDGEIVQVGTPEEILL--------NPANDYVRDFVRNV 268 (386)
T ss_pred EecCCeEEEeCCHHHHHc--------CccHHHHHHHHhcC
Confidence 999999999999999974 45555566676654
No 263
>PRK11264 putative amino-acid ABC transporter ATP-binding protein YecC; Provisional
Probab=100.00 E-value=5.2e-35 Score=325.46 Aligned_cols=205 Identities=21% Similarity=0.308 Sum_probs=170.5
Q ss_pred eeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCceeeEEEECCccCCCC-----------CCCceEEEEecC
Q 000997 149 TILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEF-----------VPPRTSAYVSQQ 217 (1194)
Q Consensus 149 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~-----------~~~~~~~yv~Q~ 217 (1194)
++|+|+|+++++|++++|+||||||||||+++|+|.+++. +|+|.++|.++... ..++.++|++|+
T Consensus 17 ~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~~~~~~i~~v~q~ 93 (250)
T PRK11264 17 TVLHGIDLEVKPGEVVAIIGPSGSGKTTLLRCINLLEQPE---AGTIRVGDITIDTARSLSQQKGLIRQLRQHVGFVFQN 93 (250)
T ss_pred eeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CeEEEECCEEccccccccchhhHHHHhhhhEEEEecC
Confidence 5999999999999999999999999999999999998775 89999999876532 124579999999
Q ss_pred CCCCCCCCHHHHHHHhhhccCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhccCcchhHHHHHHHHHhCCcccccc
Q 000997 218 DWQVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADT 297 (1194)
Q Consensus 218 d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~k~~~~~~~~~~~~~~~~l~~lgL~~~~dt 297 (1194)
+.+++.+||+||+.++..... +... ......++.+++.+||.+..|+
T Consensus 94 ~~~~~~~tv~e~l~~~~~~~~-~~~~--------------------------------~~~~~~~~~~l~~~gl~~~~~~ 140 (250)
T PRK11264 94 FNLFPHRTVLENIIEGPVIVK-GEPK--------------------------------EEATARARELLAKVGLAGKETS 140 (250)
T ss_pred cccCCCCCHHHHHHHHHHHhc-CCCH--------------------------------HHHHHHHHHHHHHcCCcchhhC
Confidence 988989999999987532110 0000 0012236778899999877666
Q ss_pred cccCccCCCCChhhhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCe
Q 000997 298 LVGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDD 377 (1194)
Q Consensus 298 ~vg~~~~~~LSGGqkqRvsia~al~~~~~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~ 377 (1194)
.+ +.|||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|+++... +.+|+.++|+.+++.+++|+
T Consensus 141 ~~-----~~LS~Gq~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~--~~tvi~~tH~~~~~~~~~d~ 213 (250)
T PRK11264 141 YP-----RRLSGGQQQRVAIARALAMRPEVILFDEPTSALDPELVGEVLNTIRQLAQE--KRTMVIVTHEMSFARDVADR 213 (250)
T ss_pred Ch-----hhCChHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHhc--CCEEEEEeCCHHHHHHhcCE
Confidence 54 469999999999999999999999999999999999999999999988653 44566688899999999999
Q ss_pred EEEEcCCeEEEecChhhHH
Q 000997 378 VILLSEGQIVYQGPRVSVL 396 (1194)
Q Consensus 378 vilL~~G~iv~~G~~~~~~ 396 (1194)
|++|++|++++.|+.+++.
T Consensus 214 i~~l~~G~i~~~~~~~~~~ 232 (250)
T PRK11264 214 AIFMDQGRIVEQGPAKALF 232 (250)
T ss_pred EEEEECCEEEEeCCHHHHh
Confidence 9999999999999987763
No 264
>PRK13647 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.4e-35 Score=330.33 Aligned_cols=203 Identities=28% Similarity=0.305 Sum_probs=170.2
Q ss_pred eeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCceeeEEEECCccCCCCCC---CceEEEEecCCC-CCCCC
Q 000997 149 TILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVP---PRTSAYVSQQDW-QVAEM 224 (1194)
Q Consensus 149 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~~~---~~~~~yv~Q~d~-~~~~l 224 (1194)
++|+|+|++|++||+++|+||||||||||+++|+|.++|. +|+|.++|.++..... ++.++|++|++. .++..
T Consensus 19 ~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~~~~~~~ 95 (274)
T PRK13647 19 KALKGLSLSIPEGSKTALLGPNGAGKSTLLLHLNGIYLPQ---RGRVKVMGREVNAENEKWVRSKVGLVFQDPDDQVFSS 95 (274)
T ss_pred eeeeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCC---ceEEEECCEECCCCCHHHHHhhEEEEecChhhhhccC
Confidence 5999999999999999999999999999999999999876 9999999988754321 356999999963 45678
Q ss_pred CHHHHHHHhhhccCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhccCcchhHHHHHHHHHhCCcccccccccCccC
Q 000997 225 TVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEML 304 (1194)
Q Consensus 225 TV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~k~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~ 304 (1194)
||.||+.|+....+... ...+..++.+++.+||.+..++.+.
T Consensus 96 tv~e~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~L~~~~~~~~~---- 137 (274)
T PRK13647 96 TVWDDVAFGPVNMGLDK----------------------------------DEVERRVEEALKAVRMWDFRDKPPY---- 137 (274)
T ss_pred cHHHHHHhhHHHcCCCH----------------------------------HHHHHHHHHHHHHCCCHHHhcCChh----
Confidence 99999988643211100 0012246788999999877776654
Q ss_pred CCCChhhhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEcCC
Q 000997 305 KGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEG 384 (1194)
Q Consensus 305 ~~LSGGqkqRvsia~al~~~~~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~~G 384 (1194)
.|||||||||+||+||+.+|++|+|||||+|||+.++.++.+.|++++.. +++|+.++|..+++.+++|+|++|++|
T Consensus 138 -~LSgG~~qrv~laraL~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~--g~tili~tH~~~~~~~~~d~i~~l~~G 214 (274)
T PRK13647 138 -HLSYGQKKRVAIAGVLAMDPDVIVLDEPMAYLDPRGQETLMEILDRLHNQ--GKTVIVATHDVDLAAEWADQVIVLKEG 214 (274)
T ss_pred -hCCHHHHHHHHHHHHHHcCCCEEEEECCCcCCCHHHHHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHhCCEEEEEECC
Confidence 69999999999999999999999999999999999999999999998753 456666889999999999999999999
Q ss_pred eEEEecChhhH
Q 000997 385 QIVYQGPRVSV 395 (1194)
Q Consensus 385 ~iv~~G~~~~~ 395 (1194)
++++.|+++++
T Consensus 215 ~i~~~g~~~~~ 225 (274)
T PRK13647 215 RVLAEGDKSLL 225 (274)
T ss_pred EEEEECCHHHh
Confidence 99999998654
No 265
>PRK14237 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.9e-35 Score=326.46 Aligned_cols=221 Identities=21% Similarity=0.262 Sum_probs=176.7
Q ss_pred cceeEeecceeeeecccccccccccccceEEeeeeeEEEeCCcEEEEEccCCCChHHHHhhhcCCCCC---CeeEEEEEE
Q 000997 814 PLSMAFGNINYFVDVPVELKQEGVLEDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTG---GIIEGDIYI 890 (1194)
Q Consensus 814 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~---~~~~G~i~i 890 (1194)
+..+.++|+++.+ +.+.+|+|||+++++||++||+||||||||||+++|+|...+ .+.+|+|.+
T Consensus 18 ~~~l~~~nl~~~~-------------~~~~il~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~ 84 (267)
T PRK14237 18 EIALSTKDLHVYY-------------GKKEAIKGIDMQFEKNKITALIGPSGSGKSTYLRSLNRMNDTIDIARVTGQILY 84 (267)
T ss_pred CeEEEEeeEEEEE-------------CCeeeEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhccCccCCCCcceEEEE
Confidence 3456777776654 235799999999999999999999999999999999998642 146899999
Q ss_pred cCccCCh-----hcccceeeEeecCCCCCCCCcHHHHHHHHhhhcCCCcCcHHHHHHHHHHHHHHcCCCcccCCcccCCC
Q 000997 891 SGYPKRQ-----ETFARISGYCEQNDIHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPG 965 (1194)
Q Consensus 891 ~g~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~ 965 (1194)
+|.++.. ...++.++|++|++.+++ .|++||+.+..... . ........+.+.++++.+++.+..+..... .
T Consensus 85 ~g~~~~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~eni~~~~~~~-~-~~~~~~~~~~~~~~l~~~~l~~~i~~~~~~-~ 160 (267)
T PRK14237 85 RGIDINRKEINVYEMRKHIGMVFQRPNPFA-KSIYENITFALERA-G-VKDKKVLDEIVETSLKQAALWDQVKDDLHK-S 160 (267)
T ss_pred CCEEcccccCChHHHhcceEEEecCCcccc-ccHHHHHHhHHHhc-C-CCCHHHHHHHHHHHHHHcCCCchhhhhhcC-C
Confidence 9987632 234567999999988877 59999998864322 1 112333445678889998885322111221 2
Q ss_pred CCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCeEEEEccC
Q 000997 966 INGLSTEQRKRLTIAVELVANPSIVFMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRG 1045 (1194)
Q Consensus 966 ~~~LSgGqrqrl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~g 1045 (1194)
+..||||||||++|||+|+.+|++|+|||||+|||+.+...+.+.|+++. ++.|||+++|+++ ++.+.||++++|+ +
T Consensus 161 ~~~LS~G~~qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~-~~~tiii~tH~~~-~~~~~~d~i~~l~-~ 237 (267)
T PRK14237 161 ALTLSGGQQQRLCIARAIAVKPDILLMDEPASALDPISTMQLEETMFELK-KNYTIIIVTHNMQ-QAARASDYTAFFY-L 237 (267)
T ss_pred cccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHh-cCCEEEEEecCHH-HHHHhcCEEEEEE-C
Confidence 46899999999999999999999999999999999999999999999985 4799999999986 5778899999998 5
Q ss_pred cEEEEeCCC
Q 000997 1046 GELIYAGPL 1054 (1194)
Q Consensus 1046 G~~~~~g~~ 1054 (1194)
|+++..|+.
T Consensus 238 G~i~~~g~~ 246 (267)
T PRK14237 238 GDLIEYDKT 246 (267)
T ss_pred CEEEEeCCH
Confidence 899998885
No 266
>TIGR02769 nickel_nikE nickel import ATP-binding protein NikE. This family represents the NikE subunit of a multisubunit nickel import ABC transporter complex. Nickel, once imported, may be used in urease and in certain classes of hydrogenase and superoxide dismutase.
Probab=100.00 E-value=3.3e-35 Score=329.30 Aligned_cols=203 Identities=24% Similarity=0.335 Sum_probs=169.2
Q ss_pred ceEEeeeeeEEEeCCcEEEEEccCCCChHHHHhhhcCCCCCCeeEEEEEEcCccCChh------cccceeeEeecCC--C
Q 000997 841 RLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQE------TFARISGYCEQND--I 912 (1194)
Q Consensus 841 ~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~------~~~~~~gyv~Q~~--~ 912 (1194)
++.+|+|+|+++++||++||+||||||||||+++|+|..+ +.+|+|.++|.++... .+++.++|++|++ .
T Consensus 23 ~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~i~~~~~~~~~~~~~~i~~v~q~~~~~ 100 (265)
T TIGR02769 23 RAPVLTNVSLSIEEGETVGLLGRSGCGKSTLARLLLGLEK--PAQGTVSFRGQDLYQLDRKQRRAFRRDVQLVFQDSPSA 100 (265)
T ss_pred ceEEeeCceeEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEEccccCHHHHHHHhhceEEEecChhhh
Confidence 4679999999999999999999999999999999999876 4689999999876421 2356799999996 4
Q ss_pred CCCCCcHHHHHHHHhhhcCCCcCcHHHHHHHHHHHHHHcCCC-cccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCEEE
Q 000997 913 HSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELT-SLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVF 991 (1194)
Q Consensus 913 ~~~~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~-~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~ill 991 (1194)
+.+.+|++||+.+...... ........+.++++++.+++. ...+.. +..||||||||++|||||+.+|++|+
T Consensus 101 ~~~~~tv~~~l~~~~~~~~--~~~~~~~~~~~~~~l~~~gl~~~~~~~~-----~~~LSgGe~qrv~laral~~~p~ill 173 (265)
T TIGR02769 101 VNPRMTVRQIIGEPLRHLT--SLDESEQKARIAELLDMVGLRSEDADKL-----PRQLSGGQLQRINIARALAVKPKLIV 173 (265)
T ss_pred cCCCCCHHHHHHHHHHHhc--CCCHHHHHHHHHHHHHHcCCChhhhhCC-----hhhCCHHHHHHHHHHHHHhcCCCEEE
Confidence 6678999999977543211 122233445678899999995 555543 35799999999999999999999999
Q ss_pred EeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCeEEEEccCcEEEEeCCC
Q 000997 992 MDEPTSGLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1194)
Q Consensus 992 LDEPTsgLD~~~~~~i~~~l~~l~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~ 1054 (1194)
|||||+|||+.++..+.+.|+++.++ |+|||+++|++. .+.+.+|++++|. +|++++.|+.
T Consensus 174 LDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiiivsH~~~-~~~~~~d~i~~l~-~G~i~~~g~~ 235 (265)
T TIGR02769 174 LDEAVSNLDMVLQAVILELLRKLQQAFGTAYLFITHDLR-LVQSFCQRVAVMD-KGQIVEECDV 235 (265)
T ss_pred EeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHH-HHHHHhcEEEEEe-CCEEEEECCH
Confidence 99999999999999999999999765 899999999976 4667899999998 5899998875
No 267
>PRK14269 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.8e-35 Score=325.40 Aligned_cols=209 Identities=22% Similarity=0.309 Sum_probs=168.0
Q ss_pred cceEEeeeeeEEEeCCcEEEEEccCCCChHHHHhhhcCCCCC-CeeEEEEEEcCccCCh---hcccceeeEeecCCCCCC
Q 000997 840 DRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTG-GIIEGDIYISGYPKRQ---ETFARISGYCEQNDIHSP 915 (1194)
Q Consensus 840 ~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~-~~~~G~i~i~g~~~~~---~~~~~~~gyv~Q~~~~~~ 915 (1194)
+++.+|+|+|+++++||+++|+||||||||||+++|+|...+ .+.+|+|.++|.++.. ..+++.++|++|++.+++
T Consensus 13 ~~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~G~i~~~g~~i~~~~~~~~~~~i~~~~q~~~l~~ 92 (246)
T PRK14269 13 GKKQALFDINMQIEQNKITALIGASGCGKSTFLRCFNRMNDKIAKIDGLVEIEGKDVKNQDVVALRKNVGMVFQQPNVFV 92 (246)
T ss_pred CCEeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCCceEEEECCEecccCCHHHHhhhEEEEecCCcccc
Confidence 345799999999999999999999999999999999997531 2468999999987643 234567999999988887
Q ss_pred CCcHHHHHHHHhhhcCCCcCcHHHHHHHHHHHHHHcCCCcccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCC
Q 000997 916 GLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEP 995 (1194)
Q Consensus 916 ~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEP 995 (1194)
.|++||+.+....+.... ......+.++++++.+++.+....... ..+..||||||||++|||+|+.+|++|+||||
T Consensus 93 -~tv~eni~~~~~~~~~~~-~~~~~~~~~~~~l~~~~l~~~~~~~~~-~~~~~LS~G~~qrv~laral~~~p~lllLDEP 169 (246)
T PRK14269 93 -KSIYENISYAPKLHGMIK-NKDEEEALVVDCLQKVGLFEEVKDKLK-QNALALSGGQQQRLCIARALAIKPKLLLLDEP 169 (246)
T ss_pred -ccHHHHhhhHHhhcCccc-ChHHHHHHHHHHHHHcCCChhhhHHhc-CCcccCCHHHHHHHHHHHHHhcCCCEEEEcCC
Confidence 699999988654331100 112334557788999998532111111 12358999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCeEEEEccCcEEEEeCCC
Q 000997 996 TSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1194)
Q Consensus 996 TsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~ 1054 (1194)
|+|||+.++..+.+.|+++.+ |+|||++||+++ ++.+.+|++++|+ +|+++..|+.
T Consensus 170 ~~~LD~~~~~~l~~~l~~~~~-~~tiii~tH~~~-~~~~~~d~i~~l~-~G~i~~~g~~ 225 (246)
T PRK14269 170 TSALDPISSGVIEELLKELSH-NLSMIMVTHNMQ-QGKRVADYTAFFH-LGELIEFGES 225 (246)
T ss_pred cccCCHHHHHHHHHHHHHHhC-CCEEEEEecCHH-HHHhhCcEEEEEE-CCEEEEECCH
Confidence 999999999999999999864 899999999986 4667899999998 5899998874
No 268
>PRK11308 dppF dipeptide transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.7e-35 Score=336.47 Aligned_cols=203 Identities=26% Similarity=0.287 Sum_probs=171.6
Q ss_pred eEEeeeeeEEEeCCcEEEEEccCCCChHHHHhhhcCCCCCCeeEEEEEEcCccCCh------hcccceeeEeecCC--CC
Q 000997 842 LQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ------ETFARISGYCEQND--IH 913 (1194)
Q Consensus 842 ~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~------~~~~~~~gyv~Q~~--~~ 913 (1194)
..+|+|||++|++||++||+|+||||||||+++|+|... +.+|+|.++|.++.. ..+++.+|||+|++ .+
T Consensus 28 ~~~l~~vsl~i~~Ge~~~IvG~sGsGKSTLl~~l~gl~~--p~~G~i~~~g~~l~~~~~~~~~~~r~~i~~v~Q~~~~~l 105 (327)
T PRK11308 28 VKALDGVSFTLERGKTLAVVGESGCGKSTLARLLTMIET--PTGGELYYQGQDLLKADPEAQKLLRQKIQIVFQNPYGSL 105 (327)
T ss_pred eeEEeeeEEEECCCCEEEEECCCCCcHHHHHHHHHcCCC--CCCcEEEECCEEcCcCCHHHHHHHhCCEEEEEcCchhhc
Confidence 579999999999999999999999999999999999876 458999999987632 13456799999997 57
Q ss_pred CCCCcHHHHHHHHhhhcCCCcCcHHHHHHHHHHHHHHcCCCc-ccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEE
Q 000997 914 SPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTS-LSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFM 992 (1194)
Q Consensus 914 ~~~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~-~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illL 992 (1194)
.|.+|+.+++.+...... .....+..+.+.++++.++|.+ ..+.. +.+|||||||||+|||||+.+|+||++
T Consensus 106 ~p~~~v~~~l~~~~~~~~--~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----p~~LSgGq~QRv~iArAL~~~P~lLil 178 (327)
T PRK11308 106 NPRKKVGQILEEPLLINT--SLSAAERREKALAMMAKVGLRPEHYDRY-----PHMFSGGQRQRIAIARALMLDPDVVVA 178 (327)
T ss_pred CCccCHHHHHHHHHHHcc--CCCHHHHHHHHHHHHHHCCCChHHhcCC-----CccCCHHHHHHHHHHHHHHcCCCEEEE
Confidence 889999999876543321 2234455667899999999963 44443 368999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCeEEEEccCcEEEEeCCCC
Q 000997 993 DEPTSGLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLG 1055 (1194)
Q Consensus 993 DEPTsgLD~~~~~~i~~~l~~l~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~~ 1055 (1194)
||||++||..++..|+++|+++.++ |.|||+||||++ .+.+.+|++++|. .|+++..|+..
T Consensus 179 DEPts~LD~~~~~~i~~lL~~l~~~~g~til~iTHdl~-~~~~~adrv~vm~-~G~ive~g~~~ 240 (327)
T PRK11308 179 DEPVSALDVSVQAQVLNLMMDLQQELGLSYVFISHDLS-VVEHIADEVMVMY-LGRCVEKGTKE 240 (327)
T ss_pred ECCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCEEEEEE-CCEEEEECCHH
Confidence 9999999999999999999999764 999999999976 4556899999998 58999999853
No 269
>PRK13549 xylose transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.4e-35 Score=360.49 Aligned_cols=211 Identities=22% Similarity=0.328 Sum_probs=176.4
Q ss_pred cceEEeeeeeEEEeCCcEEEEEccCCCChHHHHhhhcCCCCCCeeEEEEEEcCccCChh----cccceeeEeecCCCCCC
Q 000997 840 DRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQE----TFARISGYCEQNDIHSP 915 (1194)
Q Consensus 840 ~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~----~~~~~~gyv~Q~~~~~~ 915 (1194)
+++.+|+||||++++||++||+||||||||||+++|+|..++++.+|+|.++|.++... ..++.+|||+|++.+++
T Consensus 16 ~~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~ 95 (506)
T PRK13549 16 GGVKALDNVSLKVRAGEIVSLCGENGAGKSTLMKVLSGVYPHGTYEGEIIFEGEELQASNIRDTERAGIAIIHQELALVK 95 (506)
T ss_pred CCeEeecceeEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCCCCCCeEEEECCEECCCCCHHHHHHCCeEEEEeccccCC
Confidence 34579999999999999999999999999999999999876433689999999876421 13456999999998889
Q ss_pred CCcHHHHHHHHhhhcCCCcCcHHHHHHHHHHHHHHcCCCcccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCC
Q 000997 916 GLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEP 995 (1194)
Q Consensus 916 ~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEP 995 (1194)
.+||+||+.|....+...........+.++++++.+++.+..+..+ ..|||||||||+||++|+.+|+|||||||
T Consensus 96 ~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSgGqkqrv~la~al~~~p~lllLDEP 170 (506)
T PRK13549 96 ELSVLENIFLGNEITPGGIMDYDAMYLRAQKLLAQLKLDINPATPV-----GNLGLGQQQLVEIAKALNKQARLLILDEP 170 (506)
T ss_pred CCcHHHHhhhcccccccCCcCHHHHHHHHHHHHHHcCCCCCcccch-----hhCCHHHHHHHHHHHHHhcCCCEEEEeCC
Confidence 9999999988654321111123334456889999999987766653 58999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCeEEEEccCcEEEEeCCCCCc
Q 000997 996 TSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLGSK 1057 (1194)
Q Consensus 996 TsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~~~~ 1057 (1194)
|+|||+.++..+++.|++++++|.|||++||+++ .+.+.||++++|+ +|++++.|+..+.
T Consensus 171 t~~LD~~~~~~l~~~l~~l~~~~~tvi~~tH~~~-~~~~~~d~v~~l~-~G~i~~~~~~~~~ 230 (506)
T PRK13549 171 TASLTESETAVLLDIIRDLKAHGIACIYISHKLN-EVKAISDTICVIR-DGRHIGTRPAAGM 230 (506)
T ss_pred CCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCcHH-HHHHhcCEEEEEE-CCEEeeecccccC
Confidence 9999999999999999999878999999999976 4667899999998 5789999987543
No 270
>PRK14235 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.6e-35 Score=327.11 Aligned_cols=220 Identities=23% Similarity=0.281 Sum_probs=174.5
Q ss_pred eeEeecceeeeecccccccccccccceEEeeeeeEEEeCCcEEEEEccCCCChHHHHhhhcCCCCC---CeeEEEEEEcC
Q 000997 816 SMAFGNINYFVDVPVELKQEGVLEDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTG---GIIEGDIYISG 892 (1194)
Q Consensus 816 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~---~~~~G~i~i~g 892 (1194)
.+.++|+++.+ +++.+|+|+|++|+|||+++|+|+||||||||+++|+|...+ .+.+|+|.++|
T Consensus 19 ~l~~~nl~~~~-------------~~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~I~~~g 85 (267)
T PRK14235 19 KMRARDVSVFY-------------GEKQALFDVDLDIPEKTVTAFIGPSGCGKSTFLRCLNRMNDTIDGCRVTGKITLDG 85 (267)
T ss_pred eEEEEeEEEEE-------------CCEEEEEEEEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCceEEEECC
Confidence 46677776654 235799999999999999999999999999999999997642 13689999999
Q ss_pred ccCCh-----hcccceeeEeecCCCCCCCCcHHHHHHHHhhhcCCCcCcHHHHHHHHHHHHHHcCCCcccCCcccCCCCC
Q 000997 893 YPKRQ-----ETFARISGYCEQNDIHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGIN 967 (1194)
Q Consensus 893 ~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~ 967 (1194)
.++.. ..+++.+||++|++.+++. |+.||+.|....+.. ........+.++++++.+++.+....... ..+.
T Consensus 86 ~~i~~~~~~~~~~~~~i~~v~q~~~~~~~-tv~enl~~~~~~~~~-~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-~~~~ 162 (267)
T PRK14235 86 EDIYDPRLDVVELRARVGMVFQKPNPFPK-SIYENVAYGPRIHGL-ARSKAELDEIVETSLRKAGLWEEVKDRLH-EPGT 162 (267)
T ss_pred EECcccccchHHHhhceEEEecCCCCCCC-cHHHHHHHHHHhccc-ccchHHHHHHHHHHHHHcCCchhhhHHhh-CCcc
Confidence 87632 2345679999999888875 999999987543311 01223334567888999998542111111 1236
Q ss_pred CCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCeEEEEccCcE
Q 000997 968 GLSTEQRKRLTIAVELVANPSIVFMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGE 1047 (1194)
Q Consensus 968 ~LSgGqrqrl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~ 1047 (1194)
.||||||||++|||+|+.+|++|+|||||+|||+.+...+.+.|+++++ +.|||+++|+++ .+...+|++++|+ +|+
T Consensus 163 ~LSgGq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~l~~-~~tiiivtH~~~-~~~~~~d~v~~l~-~G~ 239 (267)
T PRK14235 163 GLSGGQQQRLCIARAIAVSPEVILMDEPCSALDPIATAKVEELIDELRQ-NYTIVIVTHSMQ-QAARVSQRTAFFH-LGN 239 (267)
T ss_pred cCCHHHHHHHHHHHHHHcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHhc-CCeEEEEEcCHH-HHHhhCCEEEEEE-CCE
Confidence 8999999999999999999999999999999999999999999999865 789999999976 4667899999998 579
Q ss_pred EEEeCCC
Q 000997 1048 LIYAGPL 1054 (1194)
Q Consensus 1048 ~~~~g~~ 1054 (1194)
++..|+.
T Consensus 240 i~~~g~~ 246 (267)
T PRK14235 240 LVEVGDT 246 (267)
T ss_pred EEEeCCH
Confidence 9988874
No 271
>cd03295 ABC_OpuCA_Osmoprotection OpuCA is a the ATP binding component of a bacterial solute transporter that serves a protective role to cells growing in a hyperosmolar environment. ABC (ATP-binding cassette) transporter nucleotide-binding domain; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition, to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.3e-35 Score=325.20 Aligned_cols=206 Identities=28% Similarity=0.391 Sum_probs=171.6
Q ss_pred eeeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCceeeEEEECCccCCCCC---CCceEEEEecCCCCCCCC
Q 000997 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV---PPRTSAYVSQQDWQVAEM 224 (1194)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~~---~~~~~~yv~Q~d~~~~~l 224 (1194)
..+|+|+|+.|++|++++|+|||||||||||++|+|.+++. +|+|.++|.++.... .++.++|++|++.+++.+
T Consensus 14 ~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~~~ 90 (242)
T cd03295 14 KKAVNNLNLEIAKGEFLVLIGPSGSGKTTTMKMINRLIEPT---SGEIFIDGEDIREQDPVELRRKIGYVIQQIGLFPHM 90 (242)
T ss_pred ceEeeeeEEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CceEEECCeEcCcCChHHhhcceEEEccCccccCCC
Confidence 35999999999999999999999999999999999998776 999999998765432 245789999999999999
Q ss_pred CHHHHHHHhhhccCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhccCcchhHHHHHHHHHhCCcc--cccccccCc
Q 000997 225 TVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDT--CADTLVGDE 302 (1194)
Q Consensus 225 TV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~k~~~~~~~~~~~~~~~~l~~lgL~~--~~dt~vg~~ 302 (1194)
||+||+.++....+... ......+.++++.+||.+ ..++.+
T Consensus 91 tv~e~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~l~l~~~~~~~~~~--- 133 (242)
T cd03295 91 TVEENIALVPKLLKWPK----------------------------------EKIRERADELLALVGLDPAEFADRYP--- 133 (242)
T ss_pred cHHHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCCCcHHHHhcCh---
Confidence 99999988643321100 001223677899999985 445443
Q ss_pred cCCCCChhhhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEc
Q 000997 303 MLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLS 382 (1194)
Q Consensus 303 ~~~~LSGGqkqRvsia~al~~~~~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~ 382 (1194)
+.|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++++.. +++|+.++|+.+++.+++|+|++|+
T Consensus 134 --~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~~-g~tvii~sH~~~~~~~~~d~i~~l~ 210 (242)
T cd03295 134 --HELSGGQQQRVGVARALAADPPLLLMDEPFGALDPITRDQLQEEFKRLQQEL-GKTIVFVTHDIDEAFRLADRIAIMK 210 (242)
T ss_pred --hhCCHHHHHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHHc-CCEEEEEecCHHHHHHhCCEEEEEE
Confidence 5699999999999999999999999999999999999999999999987532 4556667888888999999999999
Q ss_pred CCeEEEecChhhHH
Q 000997 383 EGQIVYQGPRVSVL 396 (1194)
Q Consensus 383 ~G~iv~~G~~~~~~ 396 (1194)
+|++++.|+.+++.
T Consensus 211 ~G~i~~~~~~~~~~ 224 (242)
T cd03295 211 NGEIVQVGTPDEIL 224 (242)
T ss_pred CCEEEEecCHHHHH
Confidence 99999999877653
No 272
>PRK13648 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.5e-35 Score=328.26 Aligned_cols=201 Identities=25% Similarity=0.340 Sum_probs=169.7
Q ss_pred eEEeeeeeEEEeCCcEEEEEccCCCChHHHHhhhcCCCCCCeeEEEEEEcCccCCh---hcccceeeEeecCCC-CCCCC
Q 000997 842 LQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ---ETFARISGYCEQNDI-HSPGL 917 (1194)
Q Consensus 842 ~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~---~~~~~~~gyv~Q~~~-~~~~l 917 (1194)
+.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++.. ...++.++|++|++. +++..
T Consensus 22 ~~~l~~isl~i~~Ge~~~I~G~nGsGKSTLl~~i~Gl~~--~~~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~~~~~~~ 99 (269)
T PRK13648 22 SFTLKDVSFNIPKGQWTSIVGHNGSGKSTIAKLMIGIEK--VKSGEIFYNNQAITDDNFEKLRKHIGIVFQNPDNQFVGS 99 (269)
T ss_pred CcceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCceEEEECCEECCcCCHHHHHhheeEEEeChHHhcccc
Confidence 358999999999999999999999999999999999876 468999999987642 345667999999974 67788
Q ss_pred cHHHHHHHHhhhcCCCcCcHHHHHHHHHHHHHHcCCCcccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCC
Q 000997 918 TVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTS 997 (1194)
Q Consensus 918 Tv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEPTs 997 (1194)
|+.+|+.|..... ........+.++++++.+++.+..+.. +..||+|||||++|||||+.+|++|+|||||+
T Consensus 100 ~v~~~~~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~G~~qrl~laral~~~p~lllLDEPt~ 171 (269)
T PRK13648 100 IVKYDVAFGLENH---AVPYDEMHRRVSEALKQVDMLERADYE-----PNALSGGQKQRVAIAGVLALNPSVIILDEATS 171 (269)
T ss_pred cHHHHHHhhHHhc---CCCHHHHHHHHHHHHHHcCCchhhhCC-----cccCCHHHHHHHHHHHHHHcCCCEEEEeCCcc
Confidence 9999998864322 122333445678899999998766654 35899999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCeEEEEccCcEEEEeCCCC
Q 000997 998 GLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLG 1055 (1194)
Q Consensus 998 gLD~~~~~~i~~~l~~l~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~~ 1055 (1194)
|||+.++..+++.|++++++ |+|||+++|+++ ++. .+|++++|+ +|++++.|+..
T Consensus 172 ~LD~~~~~~l~~~L~~~~~~~~~tiiivtH~~~-~~~-~~d~i~~l~-~G~i~~~g~~~ 227 (269)
T PRK13648 172 MLDPDARQNLLDLVRKVKSEHNITIISITHDLS-EAM-EADHVIVMN-KGTVYKEGTPT 227 (269)
T ss_pred cCCHHHHHHHHHHHHHHHHhcCCEEEEEecCch-HHh-cCCEEEEEE-CCEEEEecCHH
Confidence 99999999999999998764 899999999986 354 499999998 58999988753
No 273
>cd03268 ABC_BcrA_bacitracin_resist The BcrA subfamily represents ABC transporters involved in peptide antibiotic resistance. Bacitracin is a dodecapeptide antibiotic produced by B. licheniformis and B. subtilis. The synthesis of bacitracin is non-ribosomally catalyzed by a multienzyme complex BcrABC. Bacitracin has potent antibiotic activity against gram-positive bacteria. The inhibition of peptidoglycan biosynthesis is the best characterized bacterial effect of bacitracin. The bacitracin resistance of B. licheniformis is mediated by the ABC transporter Bcr which is composed of two identical BcrA ATP-binding subunits and one each of the integral membrane proteins, BcrB and BcrC. B. subtilis cells carrying bcr genes on high-copy number plasmids develop collateral detergent sensitivity, a similar phenomenon in human cells with overexpressed multi-drug resistance P-glycoprotein.
Probab=100.00 E-value=2.6e-35 Score=318.46 Aligned_cols=195 Identities=25% Similarity=0.397 Sum_probs=165.8
Q ss_pred eeeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCceeeEEEECCccCCCC-CCCceEEEEecCCCCCCCCCH
Q 000997 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEF-VPPRTSAYVSQQDWQVAEMTV 226 (1194)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~-~~~~~~~yv~Q~d~~~~~lTV 226 (1194)
.++|+|+|+++++|++++|+|||||||||||++|+|.+++. +|+|.++|.++... ..++.++|++|++.+++.+||
T Consensus 13 ~~~l~~~~~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~tv 89 (208)
T cd03268 13 KRVLDDISLHVKKGEIYGFLGPNGAGKTTTMKIILGLIKPD---SGEITFDGKSYQKNIEALRRIGALIEAPGFYPNLTA 89 (208)
T ss_pred eEeEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCC---ceEEEECCCcccchHHHHhhEEEecCCCccCccCcH
Confidence 46999999999999999999999999999999999998776 99999999876532 124579999999988999999
Q ss_pred HHHHHHhhhccCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhccCcchhHHHHHHHHHhCCcccccccccCccCCC
Q 000997 227 RETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEMLKG 306 (1194)
Q Consensus 227 ~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~k~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~ 306 (1194)
+||+.+.....+. .+..++.+++.+||.+..++.++ .
T Consensus 90 ~e~l~~~~~~~~~--------------------------------------~~~~~~~~l~~~~l~~~~~~~~~-----~ 126 (208)
T cd03268 90 RENLRLLARLLGI--------------------------------------RKKRIDEVLDVVGLKDSAKKKVK-----G 126 (208)
T ss_pred HHHHHHHHHhcCC--------------------------------------cHHHHHHHHHHcCCHHHHhhhHh-----h
Confidence 9999875432110 01236778899999887776554 5
Q ss_pred CChhhhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEcCCeE
Q 000997 307 ISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEGQI 386 (1194)
Q Consensus 307 LSGGqkqRvsia~al~~~~~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~~G~i 386 (1194)
|||||||||+||+|++.+|++++|||||+|||+.+...+.+.|+++++ .+ .+++.++|+.+++.+++|++++|++|++
T Consensus 127 LS~G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~-~tii~~tH~~~~~~~~~d~v~~l~~g~i 204 (208)
T cd03268 127 FSLGMKQRLGIALALLGNPDLLILDEPTNGLDPDGIKELRELILSLRD-QG-ITVLISSHLLSEIQKVADRIGIINKGKL 204 (208)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEECCCcccCCHHHHHHHHHHHHHHHH-CC-CEEEEEcCCHHHHHHhcCEEEEEECCEE
Confidence 999999999999999999999999999999999999999999998875 33 4566678888999999999999999999
Q ss_pred EEec
Q 000997 387 VYQG 390 (1194)
Q Consensus 387 v~~G 390 (1194)
++.|
T Consensus 205 ~~~g 208 (208)
T cd03268 205 IEEG 208 (208)
T ss_pred EecC
Confidence 8765
No 274
>TIGR02142 modC_ABC molybdenum ABC transporter, ATP-binding protein. This model represents the ATP-binding cassette (ABC) protein of the three subunit molybdate ABC transporter. The three proteins of this complex are homologous to proteins of the sulfate ABC transporter. Molybdenum may be used in nitrogenases of nitrogen-fixing bacteria and in molybdopterin cofactors. In some cases, molybdate may be transported by a sulfate transporter rather than by a specific molybdate transporter.
Probab=100.00 E-value=3.2e-35 Score=341.63 Aligned_cols=194 Identities=27% Similarity=0.399 Sum_probs=168.2
Q ss_pred eeeEEEeCCcEEEEEccCCCChHHHHhhhcCCCCCCeeEEEEEEcCccCCh-------hcccceeeEeecCCCCCCCCcH
Q 000997 847 NVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ-------ETFARISGYCEQNDIHSPGLTV 919 (1194)
Q Consensus 847 ~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~-------~~~~~~~gyv~Q~~~~~~~lTv 919 (1194)
|+|+++++||+++|+|||||||||||++|+|..+ +.+|+|.++|.++.. ...++.+||++|++.+++.+||
T Consensus 15 ~isl~i~~Gei~~l~G~nGsGKSTLl~~iaGl~~--p~~G~I~~~g~~i~~~~~~~~~~~~~~~i~~v~q~~~l~~~~tv 92 (354)
T TIGR02142 15 DADFTLPGQGVTAIFGRSGSGKTTLIRLIAGLTR--PDEGEIVLNGRTLFDSRKGIFLPPEKRRIGYVFQEARLFPHLSV 92 (354)
T ss_pred EEEEEECCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEECccCccccccchhhCCeEEEecCCccCCCCcH
Confidence 9999999999999999999999999999999876 468999999987532 1245679999999999999999
Q ss_pred HHHHHHHhhhcCCCcCcHHHHHHHHHHHHHHcCCCcccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCC
Q 000997 920 LESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSGL 999 (1194)
Q Consensus 920 ~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEPTsgL 999 (1194)
+||+.|+.... ...+..+.++++++.++|.+..+... ..|||||||||+|||||+.+|++|+|||||+||
T Consensus 93 ~enl~~~~~~~-----~~~~~~~~~~~~l~~~gL~~~~~~~~-----~~LSgGqkqRvalAraL~~~p~lllLDEPts~L 162 (354)
T TIGR02142 93 RGNLRYGMKRA-----RPSERRISFERVIELLGIGHLLGRLP-----GRLSGGEKQRVAIGRALLSSPRLLLMDEPLAAL 162 (354)
T ss_pred HHHHHHHhhcc-----ChhHHHHHHHHHHHHcCChhHhcCCh-----hhCCHHHHHHHHHHHHHHcCCCEEEEcCCCcCC
Confidence 99999865321 12233456889999999988777653 589999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCeEEEEccCcEEEEeCCC
Q 000997 1000 DARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1194)
Q Consensus 1000 D~~~~~~i~~~l~~l~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~ 1054 (1194)
|+.++..+++.|++++++ |+|||++||+++ ++...+|++++|++ |+++..|+.
T Consensus 163 D~~~~~~l~~~L~~l~~~~g~tiiivtH~~~-~~~~~~d~i~~l~~-G~i~~~g~~ 216 (354)
T TIGR02142 163 DDPRKYEILPYLERLHAEFGIPILYVSHSLQ-EVLRLADRVVVLED-GRVAAAGPI 216 (354)
T ss_pred CHHHHHHHHHHHHHHHHhcCCEEEEEecCHH-HHHHhCCEEEEEeC-CEEEEECCH
Confidence 999999999999999765 899999999986 57778999999984 799998875
No 275
>PRK13632 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.7e-35 Score=329.02 Aligned_cols=201 Identities=24% Similarity=0.339 Sum_probs=169.9
Q ss_pred ceEEeeeeeEEEeCCcEEEEEccCCCChHHHHhhhcCCCCCCeeEEEEEEcCccCCh---hcccceeeEeecCCC-CCCC
Q 000997 841 RLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ---ETFARISGYCEQNDI-HSPG 916 (1194)
Q Consensus 841 ~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~---~~~~~~~gyv~Q~~~-~~~~ 916 (1194)
++.+|+|||+++++||+++|+||||||||||+++|+|... +.+|+|.++|.++.. ..+++.+||++|++. .++.
T Consensus 21 ~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--p~~G~I~~~g~~i~~~~~~~~~~~i~~v~q~~~~~~~~ 98 (271)
T PRK13632 21 ENNALKNVSFEINEGEYVAILGHNGSGKSTISKILTGLLK--PQSGEIKIDGITISKENLKEIRKKIGIIFQNPDNQFIG 98 (271)
T ss_pred CccceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCceEEECCEecCcCCHHHHhcceEEEEeCHHHhcCc
Confidence 3569999999999999999999999999999999999876 468999999987642 235677999999974 5677
Q ss_pred CcHHHHHHHHhhhcCCCcCcHHHHHHHHHHHHHHcCCCcccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCC
Q 000997 917 LTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPT 996 (1194)
Q Consensus 917 lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEPT 996 (1194)
+|++||+.+..... .....+....++++++.+++.+..+..+ ..||||||||++|||||+.+|++|+|||||
T Consensus 99 ~tv~enl~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrl~laral~~~p~lllLDEP~ 170 (271)
T PRK13632 99 ATVEDDIAFGLENK---KVPPKKMKDIIDDLAKKVGMEDYLDKEP-----QNLSGGQKQRVAIASVLALNPEIIIFDEST 170 (271)
T ss_pred ccHHHHHHhHHHHc---CCCHHHHHHHHHHHHHHcCCHHHhhCCc-----ccCCHHHHHHHHHHHHHHcCCCEEEEeCCc
Confidence 89999998864322 1223334456788999999987766653 589999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCeEEEEccCcEEEEeCCC
Q 000997 997 SGLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1194)
Q Consensus 997 sgLD~~~~~~i~~~l~~l~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~ 1054 (1194)
+|||+.++..+++.|++++++ ++|||+++|+++. + ..+|++++|. +|+++..|+.
T Consensus 171 ~gLD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~-~-~~~d~v~~l~-~G~i~~~g~~ 226 (271)
T PRK13632 171 SMLDPKGKREIKKIMVDLRKTRKKTLISITHDMDE-A-ILADKVIVFS-EGKLIAQGKP 226 (271)
T ss_pred ccCCHHHHHHHHHHHHHHHHhcCcEEEEEEechhH-H-hhCCEEEEEE-CCEEEEecCH
Confidence 999999999999999999766 5999999999863 4 4799999998 4789888875
No 276
>cd03300 ABC_PotA_N PotA is an ABC-type transporter and the ATPase component of the spermidine/putrescine-preferential uptake system consisting of PotA, -B, -C, and -D. PotA has two domains with the N-terminal domain containing the ATPase activity and the residues required for homodimerization with PotA and heterdimerization with PotB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=4.7e-35 Score=321.77 Aligned_cols=202 Identities=27% Similarity=0.391 Sum_probs=172.0
Q ss_pred ceEEeeeeeEEEeCCcEEEEEccCCCChHHHHhhhcCCCCCCeeEEEEEEcCccCChh-cccceeeEeecCCCCCCCCcH
Q 000997 841 RLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQE-TFARISGYCEQNDIHSPGLTV 919 (1194)
Q Consensus 841 ~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~-~~~~~~gyv~Q~~~~~~~lTv 919 (1194)
.+.+|+|+|++++||++++|+|+||||||||+++|+|..+ +..|+|.++|.++... ..++.+||++|++.+++.+|+
T Consensus 12 ~~~il~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~g~~~--~~~G~i~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~t~ 89 (232)
T cd03300 12 GFVALDGVSLDIKEGEFFTLLGPSGCGKTTLLRLIAGFET--PTSGEILLDGKDITNLPPHKRPVNTVFQNYALFPHLTV 89 (232)
T ss_pred CeeeeccceEEECCCCEEEEECCCCCCHHHHHHHHhcCCC--CCceEEEECCEEcCcCChhhcceEEEecccccCCCCcH
Confidence 4579999999999999999999999999999999999876 4589999999876431 234678999999998889999
Q ss_pred HHHHHHHhhhcCCCcCcHHHHHHHHHHHHHHcCCCcccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCC
Q 000997 920 LESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSGL 999 (1194)
Q Consensus 920 ~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEPTsgL 999 (1194)
+||+.+....+. .......+.++++++.+++.+..+..+ ..||+|||||++|||+|+.+|++|+|||||+||
T Consensus 90 ~~nl~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~lS~G~~qrl~laral~~~p~llllDEP~~gL 161 (232)
T cd03300 90 FENIAFGLRLKK---LPKAEIKERVAEALDLVQLEGYANRKP-----SQLSGGQQQRVAIARALVNEPKVLLLDEPLGAL 161 (232)
T ss_pred HHHHHHHHHhcC---CCHHHHHHHHHHHHHHcCCchhhcCCh-----hhCCHHHHHHHHHHHHHhcCCCEEEEcCCcccC
Confidence 999987654332 122333456788999999987776643 579999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCeEEEEccCcEEEEeCCC
Q 000997 1000 DARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1194)
Q Consensus 1000 D~~~~~~i~~~l~~l~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~ 1054 (1194)
|+.++..+.+.|++++++ |+|||+++|++. ++.+.+|++++|++ |++++.|+.
T Consensus 162 D~~~~~~l~~~l~~~~~~~~~tiii~sh~~~-~~~~~~d~i~~l~~-G~~~~~~~~ 215 (232)
T cd03300 162 DLKLRKDMQLELKRLQKELGITFVFVTHDQE-EALTMSDRIAVMNK-GKIQQIGTP 215 (232)
T ss_pred CHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhcCEEEEEEC-CEEEecCCH
Confidence 999999999999999764 899999999976 46788999999984 788888763
No 277
>PRK13645 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.5e-35 Score=332.26 Aligned_cols=200 Identities=21% Similarity=0.298 Sum_probs=165.8
Q ss_pred EEeeeeeEEEeCCcEEEEEccCCCChHHHHhhhcCCCCCCeeEEEEEEcCccCC--------hhcccceeeEeecCCCC-
Q 000997 843 QLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKR--------QETFARISGYCEQNDIH- 913 (1194)
Q Consensus 843 ~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~--------~~~~~~~~gyv~Q~~~~- 913 (1194)
.+|+||||++++||++||+||||||||||+++|+|..+ +.+|+|.++|.++. ...+++.++|++|++..
T Consensus 25 ~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~i~~~~~~~~~~~~~~~~i~~v~q~~~~~ 102 (289)
T PRK13645 25 KALNNTSLTFKKNKVTCVIGTTGSGKSTMIQLTNGLII--SETGQTIVGDYAIPANLKKIKEVKRLRKEIGLVFQFPEYQ 102 (289)
T ss_pred ceeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCceEEECCEEccccccccccHHHHhccEEEEEeCcchh
Confidence 59999999999999999999999999999999999876 46899999998753 12345679999999742
Q ss_pred CCCCcHHHHHHHHhhhcCCCcCcHHHHHHHHHHHHHHcCCC-cccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEE
Q 000997 914 SPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELT-SLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFM 992 (1194)
Q Consensus 914 ~~~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~-~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illL 992 (1194)
+...|++||+.|..... ........+.++++++.++|. +..+.. +..||||||||++|||||+.+|++|+|
T Consensus 103 ~~~~tv~enl~~~~~~~---~~~~~~~~~~~~~ll~~~~L~~~~~~~~-----~~~LS~Gq~qrv~laral~~~p~lLlL 174 (289)
T PRK13645 103 LFQETIEKDIAFGPVNL---GENKQEAYKKVPELLKLVQLPEDYVKRS-----PFELSGGQKRRVALAGIIAMDGNTLVL 174 (289)
T ss_pred hhhhHHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCChhHhcCC-----hhhCCHHHHHHHHHHHHHHhCCCEEEE
Confidence 22469999998864322 122333445677889999884 555543 358999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCeEEEEccCcEEEEeCCC
Q 000997 993 DEPTSGLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1194)
Q Consensus 993 DEPTsgLD~~~~~~i~~~l~~l~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~ 1054 (1194)
||||+|||+.++..+++.|+++.++ |+|||+++|+++ ++.+.||++++|+ +|++++.|+.
T Consensus 175 DEPt~~LD~~~~~~l~~~l~~~~~~~~~tiiiisH~~~-~~~~~~d~i~~l~-~G~i~~~g~~ 235 (289)
T PRK13645 175 DEPTGGLDPKGEEDFINLFERLNKEYKKRIIMVTHNMD-QVLRIADEVIVMH-EGKVISIGSP 235 (289)
T ss_pred eCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHH-HHHHhCCEEEEEE-CCEEEEeCCH
Confidence 9999999999999999999998764 899999999986 5678899999998 4789888874
No 278
>PRK13646 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.2e-35 Score=330.89 Aligned_cols=205 Identities=20% Similarity=0.281 Sum_probs=169.9
Q ss_pred eeeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCceeeEEEECCccCCCCC-------CCceEEEEecCC--
Q 000997 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV-------PPRTSAYVSQQD-- 218 (1194)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~~-------~~~~~~yv~Q~d-- 218 (1194)
+++|+|||++|++||+++|+||||||||||+++|+|.++++ +|+|.++|.++.... .++.++||+|++
T Consensus 20 ~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~L~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~~~~~ig~v~q~~~~ 96 (286)
T PRK13646 20 HQAIHDVNTEFEQGKYYAIVGQTGSGKSTLIQNINALLKPT---TGTVTVDDITITHKTKDKYIRPVRKRIGMVFQFPES 96 (286)
T ss_pred cCceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CcEEEECCEECccccccchHHHHHhheEEEecChHh
Confidence 35999999999999999999999999999999999999876 999999998875421 245799999986
Q ss_pred CCCCCCCHHHHHHHhhhccCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhccCcchhHHHHHHHHHhCCc-ccccc
Q 000997 219 WQVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLD-TCADT 297 (1194)
Q Consensus 219 ~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~k~~~~~~~~~~~~~~~~l~~lgL~-~~~dt 297 (1194)
.+++ .||.||+.|+....+... .+....++++++.+||. +..++
T Consensus 97 ~l~~-~tv~e~i~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~gL~~~~~~~ 141 (286)
T PRK13646 97 QLFE-DTVEREIIFGPKNFKMNL----------------------------------DEVKNYAHRLLMDLGFSRDVMSQ 141 (286)
T ss_pred ccch-hhHHHHHHhhHHHcCCCH----------------------------------HHHHHHHHHHHHHcCCChhhhhC
Confidence 3444 599999988643211100 00122467889999996 55665
Q ss_pred cccCccCCCCChhhhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCe
Q 000997 298 LVGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDD 377 (1194)
Q Consensus 298 ~vg~~~~~~LSGGqkqRvsia~al~~~~~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~ 377 (1194)
.+ +.|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++... .+++|+.++|..+++.+++|+
T Consensus 142 ~~-----~~LSgGq~qrv~laraL~~~p~illlDEPt~~LD~~~~~~l~~~l~~l~~~-~g~tvl~vtH~~~~~~~~~dr 215 (286)
T PRK13646 142 SP-----FQMSGGQMRKIAIVSILAMNPDIIVLDEPTAGLDPQSKRQVMRLLKSLQTD-ENKTIILVSHDMNEVARYADE 215 (286)
T ss_pred Cc-----ccCCHHHHHHHHHHHHHHhCCCEEEEECCcccCCHHHHHHHHHHHHHHHHh-CCCEEEEEecCHHHHHHhCCE
Confidence 44 569999999999999999999999999999999999999999999998653 346667788999999999999
Q ss_pred EEEEcCCeEEEecChhhHH
Q 000997 378 VILLSEGQIVYQGPRVSVL 396 (1194)
Q Consensus 378 vilL~~G~iv~~G~~~~~~ 396 (1194)
|++|++|++++.|+++++.
T Consensus 216 i~~l~~G~i~~~g~~~~~~ 234 (286)
T PRK13646 216 VIVMKEGSIVSQTSPKELF 234 (286)
T ss_pred EEEEECCEEEEECCHHHHH
Confidence 9999999999999988764
No 279
>PRK14250 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.2e-35 Score=323.90 Aligned_cols=197 Identities=25% Similarity=0.361 Sum_probs=165.5
Q ss_pred ceEEeeeeeEEEeCCcEEEEEccCCCChHHHHhhhcCCCCCCeeEEEEEEcCccCCh---hcccceeeEeecCCCCCCCC
Q 000997 841 RLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ---ETFARISGYCEQNDIHSPGL 917 (1194)
Q Consensus 841 ~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~---~~~~~~~gyv~Q~~~~~~~l 917 (1194)
++.+|+|+||++++||+++|+||||||||||+++|+|... +.+|+|.++|.++.. ...++.++|++|++.+++ .
T Consensus 15 ~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~i~~~~~~~~~~~i~~~~q~~~~~~-~ 91 (241)
T PRK14250 15 GKEILKDISVKFEGGAIYTIVGPSGAGKSTLIKLINRLID--PTEGSILIDGVDIKTIDVIDLRRKIGMVFQQPHLFE-G 91 (241)
T ss_pred CeeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEEhhhcChHHhhhcEEEEecCchhch-h
Confidence 3569999999999999999999999999999999999866 468999999987532 234567999999988776 6
Q ss_pred cHHHHHHHHhhhcCCCcCcHHHHHHHHHHHHHHcCCC-cccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCC
Q 000997 918 TVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELT-SLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPT 996 (1194)
Q Consensus 918 Tv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~-~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEPT 996 (1194)
|++||+.+....+ . .....++++++.+++. +..+.. +..||||||||++||+||+.+|++|+|||||
T Consensus 92 tv~e~l~~~~~~~---~----~~~~~~~~~l~~~~l~~~~~~~~-----~~~LS~G~~qrl~la~al~~~p~llllDEPt 159 (241)
T PRK14250 92 TVKDNIEYGPMLK---G----EKNVDVEYYLSIVGLNKEYATRD-----VKNLSGGEAQRVSIARTLANNPEVLLLDEPT 159 (241)
T ss_pred hHHHHHhcchhhc---C----cHHHHHHHHHHHcCCCHHHhhCC-----cccCCHHHHHHHHHHHHHhcCCCEEEEeCCc
Confidence 9999998753321 1 1124567889999996 444543 3579999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCeEEEEccCcEEEEeCCC
Q 000997 997 SGLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1194)
Q Consensus 997 sgLD~~~~~~i~~~l~~l~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~ 1054 (1194)
+|||+.++..+.+.|++++++ |+|||++||+++ .+.+.+|++++|.+ |+++..|+.
T Consensus 160 ~~LD~~~~~~l~~~l~~~~~~~g~tii~~sH~~~-~~~~~~d~i~~l~~-G~i~~~~~~ 216 (241)
T PRK14250 160 SALDPTSTEIIEELIVKLKNKMNLTVIWITHNME-QAKRIGDYTAFLNK-GILVEYAKT 216 (241)
T ss_pred ccCCHHHHHHHHHHHHHHHHhCCCEEEEEeccHH-HHHHhCCEEEEEeC-CEEEEeCCH
Confidence 999999999999999999764 999999999986 46678999999984 788888875
No 280
>cd03233 ABC_PDR_domain1 The pleiotropic drug resistance (PDR) family of ATP-binding cassette (ABC) transporters. PDR is a well-described phenomenon occurring in fungi and shares several similarities with processes in bacteria and higher eukaryotes. This PDR subfamily represents domain I of its (ABC-IM)2 organization. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds including sugars, ions, peptides, and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=5.1e-35 Score=314.08 Aligned_cols=183 Identities=46% Similarity=0.768 Sum_probs=156.0
Q ss_pred cceeeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCceeeEEEECCccCCCC--CCCceEEEEecCCCCCCC
Q 000997 146 SKLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEF--VPPRTSAYVSQQDWQVAE 223 (1194)
Q Consensus 146 ~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~--~~~~~~~yv~Q~d~~~~~ 223 (1194)
.++.+|+|+|+.+++|++++|+|||||||||||++|+|.+++..+.+|+|.++|.++... ..++.++|++|++.+++.
T Consensus 18 ~~~~il~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~~~~G~i~i~g~~~~~~~~~~~~~i~~~~q~~~~~~~ 97 (202)
T cd03233 18 SKIPILKDFSGVVKPGEMVLVLGRPGSGCSTLLKALANRTEGNVSVEGDIHYNGIPYKEFAEKYPGEIIYVSEEDVHFPT 97 (202)
T ss_pred CCceeeeeEEEEECCCcEEEEECCCCCCHHHHHHHhcccCCCCCCcceEEEECCEECccchhhhcceEEEEecccccCCC
Confidence 345799999999999999999999999999999999999873223599999999887543 234679999999999999
Q ss_pred CCHHHHHHHhhhccCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhccCcchhHHHHHHHHHhCCcccccccccCcc
Q 000997 224 MTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEM 303 (1194)
Q Consensus 224 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~k~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~ 303 (1194)
+||+||+.++.+.. .+ ..
T Consensus 98 ~tv~~~l~~~~~~~---------------------------------------------------------~~-----~~ 115 (202)
T cd03233 98 LTVRETLDFALRCK---------------------------------------------------------GN-----EF 115 (202)
T ss_pred CcHHHHHhhhhhhc---------------------------------------------------------cc-----cc
Confidence 99999998743210 11 22
Q ss_pred CCCCChhhhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEcC
Q 000997 304 LKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSE 383 (1194)
Q Consensus 304 ~~~LSGGqkqRvsia~al~~~~~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~~ 383 (1194)
...||||||||++||+||+.+|++++|||||+|||+.++..+.+.++++.+..+.+++++++|+.+++.+++|++++|++
T Consensus 116 ~~~LS~Ge~qrl~laral~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~~t~ii~~~h~~~~~~~~~d~i~~l~~ 195 (202)
T cd03233 116 VRGISGGERKRVSIAEALVSRASVLCWDNSTRGLDSSTALEILKCIRTMADVLKTTTFVSLYQASDEIYDLFDKVLVLYE 195 (202)
T ss_pred hhhCCHHHHHHHHHHHHHhhCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhCCCEEEEEEcCCHHHHHHhCCeEEEEEC
Confidence 34699999999999999999999999999999999999999999999987644556777778888899999999999999
Q ss_pred CeEEEec
Q 000997 384 GQIVYQG 390 (1194)
Q Consensus 384 G~iv~~G 390 (1194)
|++++.|
T Consensus 196 G~i~~~g 202 (202)
T cd03233 196 GRQIYYG 202 (202)
T ss_pred CEEEecC
Confidence 9998765
No 281
>cd03234 ABCG_White The White subfamily represents ABC transporters homologous to the Drosophila white gene, which acts as a dimeric importer for eye pigment precursors. The eye pigmentation of Drosophila is developed from the synthesis and deposition in the cells of red pigments, which are synthesized from guanine, and brown pigments, which are synthesized from tryptophan. The pigment precursors are encoded by the white, brown, and scarlet genes, respectively. Evidence from genetic and biochemical studies suggest that the White and Brown proteins function as heterodimers to import guanine, while the White and Scarlet proteins function to import tryptophan. However, a recent study also suggests that White may be involved in the transport of a metabolite, such as 3-hydroxykynurenine, across intracellular membranes. Mammalian ABC transporters belonging to the White subfamily (ABCG1, ABCG5, and ABCG8) have been shown to be involved in the regulation of lipid-trafficking mechanisms in
Probab=100.00 E-value=3e-35 Score=322.12 Aligned_cols=205 Identities=34% Similarity=0.509 Sum_probs=164.6
Q ss_pred eeeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCceeeEEEECCccCCCCCCCceEEEEecCCCCCCCCCHH
Q 000997 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVPPRTSAYVSQQDWQVAEMTVR 227 (1194)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lTV~ 227 (1194)
+++|+|+|++|++||+++|+||||||||||+++|+|.+++..+.+|+|.++|.++.....++.++|++|++.+++.+||+
T Consensus 20 ~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLlk~l~G~~~~~~~~~G~i~~~g~~~~~~~~~~~i~~~~q~~~~~~~~tv~ 99 (226)
T cd03234 20 ARILNDVSLHVESGQVMAILGSSGSGKTTLLDAISGRVEGGGTTSGQILFNGQPRKPDQFQKCVAYVRQDDILLPGLTVR 99 (226)
T ss_pred cccccCceEEEcCCeEEEEECCCCCCHHHHHHHHhCccCCCCCCceEEEECCEECChHHhcccEEEeCCCCccCcCCcHH
Confidence 57999999999999999999999999999999999998721124999999998775434467899999999999999999
Q ss_pred HHHHHhhhccCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhccCcchhHHHHH-HHHHhCCcccccccccCccCCC
Q 000997 228 ETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEY-IMKILGLDTCADTLVGDEMLKG 306 (1194)
Q Consensus 228 E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~k~~~~~~~~~~~~~~~-~l~~lgL~~~~dt~vg~~~~~~ 306 (1194)
||+.|+.......... .. .....++. .++.+++.+..++.+ +.
T Consensus 100 enl~~~~~~~~~~~~~---~~----------------------------~~~~~~~~~~l~~~~l~~~~~~~~-----~~ 143 (226)
T cd03234 100 ETLTYTAILRLPRKSS---DA----------------------------IRKKRVEDVLLRDLALTRIGGNLV-----KG 143 (226)
T ss_pred HHHHHHHHhhcccccc---hH----------------------------HHHHHHHHHHHHhhcchhhhcccc-----cC
Confidence 9999865432211000 00 00112344 788888876665544 46
Q ss_pred CChhhhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecCh-hHHHhhcCeEEEEcCCe
Q 000997 307 ISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPA-PEAYELFDDVILLSEGQ 385 (1194)
Q Consensus 307 LSGGqkqRvsia~al~~~~~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~-~~~~~~~D~vilL~~G~ 385 (1194)
|||||||||+||+||+.+|++++|||||+|||+.++..+.+.++++.+. +.|+|+ ++|.. .++.+++|++++|++|+
T Consensus 144 LS~G~~qrl~laral~~~p~illlDEP~~gLD~~~~~~~~~~l~~~~~~-~~tiii-~sh~~~~~~~~~~d~i~~l~~G~ 221 (226)
T cd03234 144 ISGGERRRVSIAVQLLWDPKVLILDEPTSGLDSFTALNLVSTLSQLARR-NRIVIL-TIHQPRSDLFRLFDRILLLSSGE 221 (226)
T ss_pred cCHHHHHHHHHHHHHHhCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHHC-CCEEEE-EecCCCHHHHHhCCEEEEEeCCE
Confidence 9999999999999999999999999999999999999999999988653 455555 55555 68999999999999999
Q ss_pred EEEec
Q 000997 386 IVYQG 390 (1194)
Q Consensus 386 iv~~G 390 (1194)
++++|
T Consensus 222 i~~~g 226 (226)
T cd03234 222 IVYSG 226 (226)
T ss_pred EEecC
Confidence 99876
No 282
>cd03226 ABC_cobalt_CbiO_domain2 Domain II of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. The CbiMNQO family ABC transport system is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=100.00 E-value=2.3e-35 Score=318.16 Aligned_cols=192 Identities=30% Similarity=0.349 Sum_probs=161.5
Q ss_pred eeeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCceeeEEEECCccCCCCCCCceEEEEecCCC-CCCCCCH
Q 000997 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVPPRTSAYVSQQDW-QVAEMTV 226 (1194)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~~~~~~~~yv~Q~d~-~~~~lTV 226 (1194)
+++|+|+|+++++|++++|+|||||||||||++|+|.++|. +|+|.++|.++.....++.++|++|++. .+..+||
T Consensus 13 ~~~l~~v~~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~i~~~~q~~~~~~~~~tv 89 (205)
T cd03226 13 TEILDDLSLDLYAGEIIALTGKNGAGKTTLAKILAGLIKES---SGSILLNGKPIKAKERRKSIGYVMQDVDYQLFTDSV 89 (205)
T ss_pred CceeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---ceEEEECCEEhhhHHhhcceEEEecChhhhhhhccH
Confidence 36999999999999999999999999999999999998876 9999999987654333467999999974 3456899
Q ss_pred HHHHHHhhhccCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhccCcchhHHHHHHHHHhCCcccccccccCccCCC
Q 000997 227 RETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEMLKG 306 (1194)
Q Consensus 227 ~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~k~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~ 306 (1194)
+||+.+.....+ .....++++++.+||.+..++.++ .
T Consensus 90 ~e~l~~~~~~~~--------------------------------------~~~~~~~~~l~~~~l~~~~~~~~~-----~ 126 (205)
T cd03226 90 REELLLGLKELD--------------------------------------AGNEQAETVLKDLDLYALKERHPL-----S 126 (205)
T ss_pred HHHHhhhhhhcC--------------------------------------ccHHHHHHHHHHcCCchhcCCCch-----h
Confidence 999987532110 001236778999999887776654 6
Q ss_pred CChhhhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEcCCeE
Q 000997 307 ISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEGQI 386 (1194)
Q Consensus 307 LSGGqkqRvsia~al~~~~~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~~G~i 386 (1194)
|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++++. +.+|+.++|..+++.+++|++++|++|++
T Consensus 127 LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~--~~tii~~sH~~~~~~~~~d~i~~l~~G~i 204 (205)
T cd03226 127 LSGGQKQRLAIAAALLSGKDLLIFDEPTSGLDYKNMERVGELIRELAAQ--GKAVIVITHDYEFLAKVCDRVLLLANGAI 204 (205)
T ss_pred CCHHHHHHHHHHHHHHhCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHhCCEEEEEECCEE
Confidence 9999999999999999999999999999999999999999999998653 45566678888899999999999999997
Q ss_pred E
Q 000997 387 V 387 (1194)
Q Consensus 387 v 387 (1194)
+
T Consensus 205 v 205 (205)
T cd03226 205 V 205 (205)
T ss_pred C
Confidence 5
No 283
>PRK11174 cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed
Probab=100.00 E-value=2.2e-35 Score=368.27 Aligned_cols=206 Identities=26% Similarity=0.401 Sum_probs=165.7
Q ss_pred eeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCceeeEEEECCccCCCCCC---CceEEEEecCCCCCCCCC
Q 000997 149 TILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVP---PRTSAYVSQQDWQVAEMT 225 (1194)
Q Consensus 149 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~lT 225 (1194)
++|+|+|++|+||+.++|+||||||||||+++|+|.+ |. +|+|.+||.++.+... ++.++||+|++++|. .|
T Consensus 364 ~vL~~i~l~i~~G~~vaIvG~SGsGKSTL~~lL~g~~-p~---~G~I~i~g~~i~~~~~~~lr~~i~~v~Q~~~LF~-~T 438 (588)
T PRK11174 364 TLAGPLNFTLPAGQRIALVGPSGAGKTSLLNALLGFL-PY---QGSLKINGIELRELDPESWRKHLSWVGQNPQLPH-GT 438 (588)
T ss_pred eeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCC-CC---CcEEEECCEecccCCHHHHHhheEEecCCCcCCC-cC
Confidence 5999999999999999999999999999999999999 65 8999999999877653 578999999999776 59
Q ss_pred HHHHHHHhhhccCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhccCcchhHHHHHHHHHhCCcccccccccCccCC
Q 000997 226 VRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEMLK 305 (1194)
Q Consensus 226 V~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~k~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~ 305 (1194)
|+|||.++.. ....+.+.++++. + ..+..+ -.|++..||.||+++ .
T Consensus 439 I~eNI~~g~~----~~~~eei~~al~~------------------a---------~l~~~i--~~lp~G~dT~vge~G-~ 484 (588)
T PRK11174 439 LRDNVLLGNP----DASDEQLQQALEN------------------A---------WVSEFL--PLLPQGLDTPIGDQA-A 484 (588)
T ss_pred HHHHhhcCCC----CCCHHHHHHHHHH------------------h---------CHHHHH--HhcccccccccccCC-C
Confidence 9999988521 1111111111110 0 011122 246778899999764 5
Q ss_pred CCChhhhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEcCCe
Q 000997 306 GISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEGQ 385 (1194)
Q Consensus 306 ~LSGGqkqRvsia~al~~~~~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~~G~ 385 (1194)
+||||||||++||||++.+|+||+||||||+||+.++..|.+.|+++.+ ++|+|+ ++|.. +....+|+|++|++|+
T Consensus 485 ~LSGGQrQRialARAll~~~~IliLDE~TSaLD~~te~~i~~~l~~~~~--~~TvIi-ItHrl-~~i~~aD~Iivl~~G~ 560 (588)
T PRK11174 485 GLSVGQAQRLALARALLQPCQLLLLDEPTASLDAHSEQLVMQALNAASR--RQTTLM-VTHQL-EDLAQWDQIWVMQDGQ 560 (588)
T ss_pred CCCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHHhC--CCEEEE-EecCh-HHHHhCCEEEEEeCCe
Confidence 7999999999999999999999999999999999999999999998743 455555 55554 4567799999999999
Q ss_pred EEEecChhhHHH
Q 000997 386 IVYQGPRVSVLD 397 (1194)
Q Consensus 386 iv~~G~~~~~~~ 397 (1194)
++..|+.+++.+
T Consensus 561 i~e~G~~~eL~~ 572 (588)
T PRK11174 561 IVQQGDYAELSQ 572 (588)
T ss_pred EeecCCHHHHHh
Confidence 999999998864
No 284
>cd03297 ABC_ModC_molybdenum_transporter ModC is an ABC-type transporter and the ATPase component of a molybdate transport system that also includes the periplasmic binding protein ModA and the membrane protein ModB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=4.2e-35 Score=318.23 Aligned_cols=197 Identities=26% Similarity=0.369 Sum_probs=164.9
Q ss_pred ccceEEeeeeeEEEeCCcEEEEEccCCCChHHHHhhhcCCCCCCeeEEEEEEcCccCCh-------hcccceeeEeecCC
Q 000997 839 EDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ-------ETFARISGYCEQND 911 (1194)
Q Consensus 839 ~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~-------~~~~~~~gyv~Q~~ 911 (1194)
++++.+ |||+++++ |+++|+||||||||||+++|+|..+ +.+|+|.++|.+... ...++.++|++|++
T Consensus 10 ~~~~~~--~vsl~i~~-e~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~~~~~~~~~~~~~~i~~~~q~~ 84 (214)
T cd03297 10 LPDFTL--KIDFDLNE-EVTGIFGASGAGKSTLLRCIAGLEK--PDGGTIVLNGTVLFDSRKKINLPPQQRKIGLVFQQY 84 (214)
T ss_pred cCCeee--CceEEEcc-eeEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEecccccchhhhhhHhhcEEEEecCC
Confidence 344555 99999999 9999999999999999999999876 468999999987531 12456799999999
Q ss_pred CCCCCCcHHHHHHHHhhhcCCCcCcHHHHHHHHHHHHHHcCCCcccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCEEE
Q 000997 912 IHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVF 991 (1194)
Q Consensus 912 ~~~~~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~ill 991 (1194)
.+++.+|++||+.+..... .....++.++++++.+++.+..+.. +..||||||||++||++|+.+|++|+
T Consensus 85 ~~~~~~t~~~~l~~~~~~~-----~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~G~~qrv~la~al~~~p~lll 154 (214)
T cd03297 85 ALFPHLNVRENLAFGLKRK-----RNREDRISVDELLDLLGLDHLLNRY-----PAQLSGGEKQRVALARALAAQPELLL 154 (214)
T ss_pred ccCCCCCHHHHHHHHHhhC-----CHHHHHHHHHHHHHHcCCHhHhhcC-----cccCCHHHHHHHHHHHHHhcCCCEEE
Confidence 9888999999998764321 1223345678899999997665553 35799999999999999999999999
Q ss_pred EeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCeEEEEccCcEEEEeC
Q 000997 992 MDEPTSGLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAG 1052 (1194)
Q Consensus 992 LDEPTsgLD~~~~~~i~~~l~~l~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g 1052 (1194)
|||||+|||+.++..+.+.|++++++ |+|||++||+++ ++.+.+|++++|.+ |+++..|
T Consensus 155 lDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~-G~i~~~g 214 (214)
T cd03297 155 LDEPFSALDRALRLQLLPELKQIKKNLNIPVIFVTHDLS-EAEYLADRIVVMED-GRLQYIG 214 (214)
T ss_pred EcCCcccCCHHHHHHHHHHHHHHHHHcCcEEEEEecCHH-HHHHhcCEEEEEEC-CEEEecC
Confidence 99999999999999999999999765 899999999976 46678999999984 7887654
No 285
>PRK15079 oligopeptide ABC transporter ATP-binding protein OppF; Provisional
Probab=100.00 E-value=4.5e-35 Score=335.93 Aligned_cols=209 Identities=20% Similarity=0.248 Sum_probs=174.2
Q ss_pred ceeeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCceeeEEEECCccCCCCC------CCceEEEEecCC--
Q 000997 147 KLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV------PPRTSAYVSQQD-- 218 (1194)
Q Consensus 147 ~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~~------~~~~~~yv~Q~d-- 218 (1194)
...+|+|||++|++||+++|+|+||||||||+++|+|++.+. +|+|.++|.++.... .++.++||+|++
T Consensus 33 ~~~~l~~vsl~i~~Ge~~~lvG~sGsGKSTLlk~i~Gl~~p~---~G~I~~~G~~i~~~~~~~~~~~r~~i~~v~Q~~~~ 109 (331)
T PRK15079 33 TLKAVDGVTLRLYEGETLGVVGESGCGKSTFARAIIGLVKAT---DGEVAWLGKDLLGMKDDEWRAVRSDIQMIFQDPLA 109 (331)
T ss_pred ceEEEeeEEEEEcCCCEEEEECCCCCCHHHHHHHHHCCCCCC---CcEEEECCEECCcCCHHHHHHHhCceEEEecCchh
Confidence 357999999999999999999999999999999999999875 999999999876543 245799999997
Q ss_pred CCCCCCCHHHHHHHhhhccCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhccCcchhHHHHHHHHHhCCc-ccccc
Q 000997 219 WQVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLD-TCADT 297 (1194)
Q Consensus 219 ~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~k~~~~~~~~~~~~~~~~l~~lgL~-~~~dt 297 (1194)
.+++.+||.||+.+..+....+.. . .+....++++++.+||. ...++
T Consensus 110 ~l~p~~tv~~~i~~~l~~~~~~~~--------~------------------------~~~~~~~~~~l~~vgl~~~~~~~ 157 (331)
T PRK15079 110 SLNPRMTIGEIIAEPLRTYHPKLS--------R------------------------QEVKDRVKAMMLKVGLLPNLINR 157 (331)
T ss_pred hcCCCCCHHHHHHHHHHHhccCCC--------H------------------------HHHHHHHHHHHHHcCCChHHhcC
Confidence 578899999999886433210000 0 01123467889999994 34454
Q ss_pred cccCccCCCCChhhhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCe
Q 000997 298 LVGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDD 377 (1194)
Q Consensus 298 ~vg~~~~~~LSGGqkqRvsia~al~~~~~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~ 377 (1194)
. ...|||||||||+||+||+.+|++|++||||+|||..++.++++.|+++.+.. +++++.++|+...+.+++|+
T Consensus 158 ~-----p~~LSgG~~QRv~iArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~-~~til~iTHdl~~~~~~~dr 231 (331)
T PRK15079 158 Y-----PHEFSGGQCQRIGIARALILEPKLIICDEPVSALDVSIQAQVVNLLQQLQREM-GLSLIFIAHDLAVVKHISDR 231 (331)
T ss_pred C-----cccCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHhCCE
Confidence 4 45799999999999999999999999999999999999999999999987643 45677789999999999999
Q ss_pred EEEEcCCeEEEecChhhHH
Q 000997 378 VILLSEGQIVYQGPRVSVL 396 (1194)
Q Consensus 378 vilL~~G~iv~~G~~~~~~ 396 (1194)
|++|++|++++.|+.+++.
T Consensus 232 i~vl~~G~ive~g~~~~i~ 250 (331)
T PRK15079 232 VLVMYLGHAVELGTYDEVY 250 (331)
T ss_pred EEEEECCEEEEEcCHHHHH
Confidence 9999999999999988774
No 286
>PRK13547 hmuV hemin importer ATP-binding subunit; Provisional
Probab=100.00 E-value=3.4e-35 Score=328.93 Aligned_cols=209 Identities=25% Similarity=0.395 Sum_probs=169.9
Q ss_pred cceEEeeeeeEEEeCCcEEEEEccCCCChHHHHhhhcCCCCCC------eeEEEEEEcCccCCh---hcccceeeEeecC
Q 000997 840 DRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGG------IIEGDIYISGYPKRQ---ETFARISGYCEQN 910 (1194)
Q Consensus 840 ~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~------~~~G~i~i~g~~~~~---~~~~~~~gyv~Q~ 910 (1194)
+++.+|+|+||++++||++||+||||||||||+++|+|..++. ..+|+|.++|.++.. ..+++.++|++|+
T Consensus 12 ~~~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~laG~~~p~~~~~~~~~~G~i~~~g~~~~~~~~~~~~~~~~~v~q~ 91 (272)
T PRK13547 12 RHRAILRDLSLRIEPGRVTALLGRNGAGKSTLLKALAGDLTGGGAPRGARVTGDVTLNGEPLAAIDAPRLARLRAVLPQA 91 (272)
T ss_pred CCEeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCcccccccCCceEEEECCEEcccCCHHHHHhhcEEeccc
Confidence 3467999999999999999999999999999999999986531 127999999987632 2345668999999
Q ss_pred CCCCCCCcHHHHHHHHhhhcCC-CcCcHHHHHHHHHHHHHHcCCCcccCCcccCCCCCCCCHHHHHHHHHHHHHh-----
Q 000997 911 DIHSPGLTVLESLLFSAWLRLP-SEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELV----- 984 (1194)
Q Consensus 911 ~~~~~~lTv~e~l~f~~~lr~~-~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~----- 984 (1194)
+..++.+|++||+.+....... ......+..+.++++++.+++....+.. +..|||||||||+||++|+
T Consensus 92 ~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LSgG~~qrv~laral~~~~~~ 166 (272)
T PRK13547 92 AQPAFAFSAREIVLLGRYPHARRAGALTHRDGEIAWQALALAGATALVGRD-----VTTLSGGELARVQFARVLAQLWPP 166 (272)
T ss_pred CCCCCCCcHHHHHhhcccccccccccCCHHHHHHHHHHHHHcCcHhhhcCC-----cccCCHHHHHHHHHHHHHhccccc
Confidence 8766679999999875321110 0111123345678899999998766654 3589999999999999999
Q ss_pred ----hCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCeEEEEccCcEEEEeCCCC
Q 000997 985 ----ANPSIVFMDEPTSGLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLG 1055 (1194)
Q Consensus 985 ----~~p~illLDEPTsgLD~~~~~~i~~~l~~l~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~~ 1055 (1194)
.+|++|+|||||+|||+.+...+.+.|+++.++ |.|||+++|+++ .+.+.+|++++|. +|++++.|+..
T Consensus 167 ~~~~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tviiisH~~~-~~~~~~d~i~~l~-~G~i~~~g~~~ 240 (272)
T PRK13547 167 HDAAQPPRYLLLDEPTAALDLAHQHRLLDTVRRLARDWNLGVLAIVHDPN-LAARHADRIAMLA-DGAIVAHGAPA 240 (272)
T ss_pred cccCCCCCEEEEcCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHH-HHHHhCCEEEEEE-CCeEEEecCHH
Confidence 599999999999999999999999999999775 899999999986 4667899999998 47999988753
No 287
>PRK13635 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.5e-35 Score=328.67 Aligned_cols=215 Identities=25% Similarity=0.357 Sum_probs=175.1
Q ss_pred eeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCceeeEEEECCccCCCCC---CCceEEEEecCCC-CCCCC
Q 000997 149 TILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV---PPRTSAYVSQQDW-QVAEM 224 (1194)
Q Consensus 149 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~~---~~~~~~yv~Q~d~-~~~~l 224 (1194)
++|+|+|++|++||+++|+|||||||||||++|+|.++|. +|+|.++|+++.... .++.++|++|++. .++..
T Consensus 21 ~~l~~vsl~i~~Ge~~~i~G~nGaGKSTLl~~i~G~~~p~---~G~i~~~g~~i~~~~~~~~~~~i~~~~q~~~~~~~~~ 97 (279)
T PRK13635 21 YALKDVSFSVYEGEWVAIVGHNGSGKSTLAKLLNGLLLPE---AGTITVGGMVLSEETVWDVRRQVGMVFQNPDNQFVGA 97 (279)
T ss_pred cceeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCC---CcEEEECCEECCcCcHHHHhhheEEEEeCHHHhcccc
Confidence 5999999999999999999999999999999999999876 999999999876432 2457999999973 57778
Q ss_pred CHHHHHHHhhhccCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhccCcchhHHHHHHHHHhCCcccccccccCccC
Q 000997 225 TVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEML 304 (1194)
Q Consensus 225 TV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~k~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~ 304 (1194)
||.|||.++....+... .+....++++++.+||.+..++.++
T Consensus 98 tv~enl~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~gL~~~~~~~~~---- 139 (279)
T PRK13635 98 TVQDDVAFGLENIGVPR----------------------------------EEMVERVDQALRQVGMEDFLNREPH---- 139 (279)
T ss_pred cHHHHHhhhHhhCCCCH----------------------------------HHHHHHHHHHHHHcCChhhhhCCcc----
Confidence 99999988643221100 0012247888999999887776654
Q ss_pred CCCChhhhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEcCC
Q 000997 305 KGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEG 384 (1194)
Q Consensus 305 ~~LSGGqkqRvsia~al~~~~~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~~G 384 (1194)
.|||||||||+||+||+.+|++|+|||||+|||+.++..+++.|++++... +++|+.++|..+++. .+|+|++|++|
T Consensus 140 -~LS~G~~qrv~laral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~l~~~~-~~tilivsH~~~~~~-~~d~i~~l~~G 216 (279)
T PRK13635 140 -RLSGGQKQRVAIAGVLALQPDIIILDEATSMLDPRGRREVLETVRQLKEQK-GITVLSITHDLDEAA-QADRVIVMNKG 216 (279)
T ss_pred -cCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHcC-CCEEEEEecCHHHHH-cCCEEEEEECC
Confidence 699999999999999999999999999999999999999999999987643 455666777777776 59999999999
Q ss_pred eEEEecChhhHHH---HHHhcCCCCC
Q 000997 385 QIVYQGPRVSVLD---FFASMGFSCP 407 (1194)
Q Consensus 385 ~iv~~G~~~~~~~---~F~~~G~~cp 407 (1194)
++++.|+.+++.. .+...|..+|
T Consensus 217 ~i~~~g~~~~~~~~~~~~~~~~~~~~ 242 (279)
T PRK13635 217 EILEEGTPEEIFKSGHMLQEIGLDVP 242 (279)
T ss_pred EEEEECCHHHHhcCHHHHHHcCCCCC
Confidence 9999999887653 3334454443
No 288
>PRK14259 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.5e-35 Score=327.32 Aligned_cols=218 Identities=22% Similarity=0.270 Sum_probs=172.2
Q ss_pred eeEeecceeeeecccccccccccccceEEeeeeeEEEeCCcEEEEEccCCCChHHHHhhhcCCCCC---CeeEEEEEEcC
Q 000997 816 SMAFGNINYFVDVPVELKQEGVLEDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTG---GIIEGDIYISG 892 (1194)
Q Consensus 816 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~---~~~~G~i~i~g 892 (1194)
.+.++|+++.+ +.+.+|+|+||+|++||++||+||||||||||+++|+|..+. .+.+|+|.++|
T Consensus 13 ~l~i~nl~~~~-------------~~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~p~~G~v~~~g 79 (269)
T PRK14259 13 IISLQNVTISY-------------GTFEAVKNVFCDIPRGKVTALIGPSGCGKSTVLRSLNRMNDLIEGCSLKGRVLFDG 79 (269)
T ss_pred eEEEEeEEEEE-------------CCEEEEcceEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECC
Confidence 46677776544 335799999999999999999999999999999999997542 13689999999
Q ss_pred ccCC-----hhcccceeeEeecCCCCCCCCcHHHHHHHHhhhcCCCcCcHHHHHHHHHHHHHHcCCCcccCCcccCCCCC
Q 000997 893 YPKR-----QETFARISGYCEQNDIHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGIN 967 (1194)
Q Consensus 893 ~~~~-----~~~~~~~~gyv~Q~~~~~~~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~ 967 (1194)
.++. ...+++.++|++|++.+++ .||+||+.+.+..+. ... ...+.++++++.+++......... ..+.
T Consensus 80 ~~i~~~~~~~~~~~~~i~~v~q~~~l~~-~tv~enl~~~~~~~~---~~~-~~~~~~~~~l~~~~l~~~l~~~~~-~~~~ 153 (269)
T PRK14259 80 TDLYDPRVDPVEVRRRIGMVFQQPNPFP-KSIYENIAFGARING---YTG-DMDELVERSLRKAAVWDECKDKLN-ESGY 153 (269)
T ss_pred EEcccccCCHHHHhhceEEEccCCccch-hhHHHHHhhhhhhcC---CcH-HHHHHHHHHHHHhCCcchhhhhhC-CCcc
Confidence 8753 2234567999999998887 499999988754331 111 223456778888876421111111 1236
Q ss_pred CCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCeEEEEcc---
Q 000997 968 GLSTEQRKRLTIAVELVANPSIVFMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKR--- 1044 (1194)
Q Consensus 968 ~LSgGqrqrl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~--- 1044 (1194)
.|||||||||+|||||+.+|++|+|||||+|||+.++..+++.|++++ ++.|||++||+++ .+.+.||++++|++
T Consensus 154 ~LS~G~~qrl~laral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~-~~~tiiivtH~~~-~~~~~~d~i~~l~~~~~ 231 (269)
T PRK14259 154 SLSGGQQQRLCIARTIAIEPEVILMDEPCSALDPISTLKIEETMHELK-KNFTIVIVTHNMQ-QAVRVSDMTAFFNAEEV 231 (269)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHh-cCCEEEEEeCCHH-HHHHhcCEEEEEecccc
Confidence 899999999999999999999999999999999999999999999985 4799999999986 57788999999985
Q ss_pred -------CcEEEEeCCC
Q 000997 1045 -------GGELIYAGPL 1054 (1194)
Q Consensus 1045 -------gG~~~~~g~~ 1054 (1194)
+|++++.|+.
T Consensus 232 ~~~~~g~~g~~~~~~~~ 248 (269)
T PRK14259 232 EGGSGGKVGYLVEFNET 248 (269)
T ss_pred ccccccccceEEEeCCH
Confidence 3678888875
No 289
>TIGR02315 ABC_phnC phosphonate ABC transporter, ATP-binding protein. Phosphonates are a class of phosphorus-containing organic compound with a stable direct C-P bond rather than a C-O-P linkage. A number of bacterial species have operons, typically about 14 genes in size, with genes for ATP-dependent transport of phosphonates, degradation, and regulation of the expression of the system. Members of this protein family are the ATP-binding cassette component of tripartite ABC transporters of phosphonates.
Probab=100.00 E-value=3.1e-35 Score=325.94 Aligned_cols=213 Identities=24% Similarity=0.334 Sum_probs=171.6
Q ss_pred eeeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCceeeEEEECCccCCCCC------CCceEEEEecCCCCC
Q 000997 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV------PPRTSAYVSQQDWQV 221 (1194)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~~------~~~~~~yv~Q~d~~~ 221 (1194)
.++|+|+|+++++|++++|+|||||||||||++|+|.+++. +|+|.++|.++.... .++.++|++|++.++
T Consensus 15 ~~il~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~i~~v~q~~~~~ 91 (243)
T TIGR02315 15 KQALKNINLNINPGEFVAIIGPSGAGKSTLLRCINRLVEPS---SGSILLEGTDITKLRGKKLRKLRRRIGMIFQHYNLI 91 (243)
T ss_pred cceeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCC---ccEEEECCEEhhhCCHHHHHHHHhheEEEcCCCccc
Confidence 35999999999999999999999999999999999998776 999999998765432 245699999999889
Q ss_pred CCCCHHHHHHHhhhccCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhccCcchhHHHHHHHHHhCCcccccccccC
Q 000997 222 AEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGD 301 (1194)
Q Consensus 222 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~k~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 301 (1194)
+.+||+||+.++..... ..+. .. .+..+ .....+++++++.+||.+..+..+
T Consensus 92 ~~~tv~~~l~~~~~~~~--~~~~---~~------~~~~~---------------~~~~~~~~~~l~~~~l~~~~~~~~-- 143 (243)
T TIGR02315 92 ERLTVLENVLHGRLGYK--PTWR---SL------LGRFS---------------EEDKERALSALERVGLADKAYQRA-- 143 (243)
T ss_pred ccccHHHHHhhcccccc--cchh---hh------hcccc---------------HHHHHHHHHHHHHcCcHhhhcCCc--
Confidence 99999999987532110 0000 00 00000 011234677899999987666554
Q ss_pred ccCCCCChhhhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEE
Q 000997 302 EMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILL 381 (1194)
Q Consensus 302 ~~~~~LSGGqkqRvsia~al~~~~~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL 381 (1194)
..|||||||||+||+||+.+|++|+|||||+|||+.+...+.+.|+++++.. +++|+.++|..+++.++||+|++|
T Consensus 144 ---~~LSgG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~-~~tiii~tH~~~~~~~~~d~v~~l 219 (243)
T TIGR02315 144 ---DQLSGGQQQRVAIARALAQQPDLILADEPIASLDPKTSKQVMDYLKRINKED-GITVIINLHQVDLAKKYADRIVGL 219 (243)
T ss_pred ---ccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHhcCeEEEE
Confidence 4699999999999999999999999999999999999999999999986543 455666888889999999999999
Q ss_pred cCCeEEEecChhhH
Q 000997 382 SEGQIVYQGPRVSV 395 (1194)
Q Consensus 382 ~~G~iv~~G~~~~~ 395 (1194)
++|++++.|+++++
T Consensus 220 ~~G~i~~~~~~~~~ 233 (243)
T TIGR02315 220 KAGEIVFDGAPSEL 233 (243)
T ss_pred ECCEEEecCCHHHh
Confidence 99999999988764
No 290
>cd03299 ABC_ModC_like Archeal protein closely related to ModC. ModC is an ABC-type transporter and the ATPase component of a molybdate transport system that also includes the periplasmic binding protein ModA and the membrane protein ModB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=5.9e-35 Score=321.47 Aligned_cols=199 Identities=27% Similarity=0.379 Sum_probs=170.0
Q ss_pred EeeeeeEEEeCCcEEEEEccCCCChHHHHhhhcCCCCCCeeEEEEEEcCccCChh-cccceeeEeecCCCCCCCCcHHHH
Q 000997 844 LLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQE-TFARISGYCEQNDIHSPGLTVLES 922 (1194)
Q Consensus 844 iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~-~~~~~~gyv~Q~~~~~~~lTv~e~ 922 (1194)
+|+|+|++++|||++||+|+||||||||+++|+|..+ +.+|+|+++|.++... ..++.++|++|++.+++.+|+.||
T Consensus 14 ~l~~is~~i~~Ge~~~i~G~nG~GKStLl~~l~G~~~--p~~G~v~i~g~~~~~~~~~~~~i~~~~q~~~~~~~~t~~e~ 91 (235)
T cd03299 14 KLKNVSLEVERGDYFVILGPTGSGKSVLLETIAGFIK--PDSGKILLNGKDITNLPPEKRDISYVPQNYALFPHMTVYKN 91 (235)
T ss_pred eeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcC--CCceEEEECCEEcCcCChhHcCEEEEeecCccCCCccHHHH
Confidence 7999999999999999999999999999999999876 5689999999876431 234679999999999999999999
Q ss_pred HHHHhhhcCCCcCcHHHHHHHHHHHHHHcCCCcccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHH
Q 000997 923 LLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSGLDAR 1002 (1194)
Q Consensus 923 l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEPTsgLD~~ 1002 (1194)
+.+..... .....+..+.+.++++.+++.+..+..+ ..||||||||++||+||+.+|++++|||||+|||+.
T Consensus 92 l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrl~laral~~~p~llllDEPt~gLD~~ 163 (235)
T cd03299 92 IAYGLKKR---KVDKKEIERKVLEIAEMLGIDHLLNRKP-----ETLSGGEQQRVAIARALVVNPKILLLDEPFSALDVR 163 (235)
T ss_pred HHHHHHHc---CCCHHHHHHHHHHHHHHcCChhHHhcCc-----ccCCHHHHHHHHHHHHHHcCCCEEEECCCcccCCHH
Confidence 98764332 1223334456778999999987776653 579999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCeEEEEccCcEEEEeCCC
Q 000997 1003 AAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1194)
Q Consensus 1003 ~~~~i~~~l~~l~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~ 1054 (1194)
++..+.+.|++++.+ |+|||+++|++. ++.+.+|++++|++ |+++..|+.
T Consensus 164 ~~~~l~~~l~~~~~~~~~tili~tH~~~-~~~~~~d~i~~l~~-G~i~~~~~~ 214 (235)
T cd03299 164 TKEKLREELKKIRKEFGVTVLHVTHDFE-EAWALADKVAIMLN-GKLIQVGKP 214 (235)
T ss_pred HHHHHHHHHHHHHHhcCCEEEEEecCHH-HHHHhCCEEEEEEC-CEEEEecCH
Confidence 999999999998764 999999999986 46678999999984 789888874
No 291
>TIGR00968 3a0106s01 sulfate ABC transporter, ATP-binding protein.
Probab=100.00 E-value=5.8e-35 Score=321.99 Aligned_cols=202 Identities=30% Similarity=0.407 Sum_probs=172.2
Q ss_pred ceEEeeeeeEEEeCCcEEEEEccCCCChHHHHhhhcCCCCCCeeEEEEEEcCccCChh-cccceeeEeecCCCCCCCCcH
Q 000997 841 RLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQE-TFARISGYCEQNDIHSPGLTV 919 (1194)
Q Consensus 841 ~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~-~~~~~~gyv~Q~~~~~~~lTv 919 (1194)
.+.+|+|+|+++.+||+++|+||||||||||+++|+|..+ +.+|+|.++|.++... ..++.++|++|++.+++.+|+
T Consensus 12 ~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~--~~~G~i~i~g~~~~~~~~~~~~i~~~~q~~~~~~~~t~ 89 (237)
T TIGR00968 12 SFQALDDVNLEVPTGSLVALLGPSGSGKSTLLRIIAGLEQ--PDSGRIRLNGQDATRVHARDRKIGFVFQHYALFKHLTV 89 (237)
T ss_pred CeeeeeeEEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCceEEEECCEEcCcCChhhcCEEEEecChhhccCCcH
Confidence 4579999999999999999999999999999999999876 4689999999876432 234679999999998899999
Q ss_pred HHHHHHHhhhcCCCcCcHHHHHHHHHHHHHHcCCCcccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCC
Q 000997 920 LESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSGL 999 (1194)
Q Consensus 920 ~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEPTsgL 999 (1194)
.||+.+....+. .......+.++++++.+++.+..+... ..||+||+||++||++|+.+|++++|||||+||
T Consensus 90 ~enl~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~lS~G~~qrl~laral~~~p~llllDEP~~~L 161 (237)
T TIGR00968 90 RDNIAFGLEIRK---HPKAKIKARVEELLELVQLEGLGDRYP-----NQLSGGQRQRVALARALAVEPQVLLLDEPFGAL 161 (237)
T ss_pred HHHHHhHHHhcC---CCHHHHHHHHHHHHHHcCCHhHhhCCh-----hhCCHHHHHHHHHHHHHhcCCCEEEEcCCcccC
Confidence 999987654331 122333456788999999977666543 579999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCeEEEEccCcEEEEeCCC
Q 000997 1000 DARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1194)
Q Consensus 1000 D~~~~~~i~~~l~~l~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~ 1054 (1194)
|+.+...+.+.|++++++ |+|||++||+++ ++.+.+|++++|+ +|++++.|+.
T Consensus 162 D~~~~~~~~~~l~~~~~~~~~tvli~sH~~~-~~~~~~d~i~~l~-~g~i~~~~~~ 215 (237)
T TIGR00968 162 DAKVRKELRSWLRKLHDEVHVTTVFVTHDQE-EAMEVADRIVVMS-NGKIEQIGSP 215 (237)
T ss_pred CHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHhhcCEEEEEE-CCEEEEecCH
Confidence 999999999999998765 899999999986 4677899999998 5789988875
No 292
>PRK00349 uvrA excinuclease ABC subunit A; Reviewed
Probab=100.00 E-value=1.3e-33 Score=356.11 Aligned_cols=123 Identities=25% Similarity=0.369 Sum_probs=101.3
Q ss_pred CCcHHHHHHHHhhhcCCCcCcHHHHHHHHHHHHHHcCCCcc-cCCcccCCCCCCCCHHHHHHHHHHHHHhhCC---CEEE
Q 000997 916 GLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSL-SGALIGLPGINGLSTEQRKRLTIAVELVANP---SIVF 991 (1194)
Q Consensus 916 ~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~-~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p---~ill 991 (1194)
.+|+.|++.|...+. . .....+.++.++|... .+.. ...||||||||+.||++|+.+| ++++
T Consensus 791 ~ltv~E~l~~f~~~~---~------i~~~l~~L~~vgL~~l~l~~~-----~~tLSgGEkQRl~LAraL~~~p~~~~llI 856 (943)
T PRK00349 791 DMTVEEALEFFEAIP---K------IARKLQTLVDVGLGYIKLGQP-----ATTLSGGEAQRVKLAKELSKRSTGKTLYI 856 (943)
T ss_pred cCcHHHHHHHHHhch---h------hhHHHHHHHHCCCCcccccCC-----cccCCHHHHHHHHHHHHHhcCCCCCeEEE
Confidence 378888888764432 1 1224577888898753 3433 3579999999999999999999 9999
Q ss_pred EeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCeEEEEc-----cCcEEEEeCCC
Q 000997 992 MDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMK-----RGGELIYAGPL 1054 (1194)
Q Consensus 992 LDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~~d~~~~l~-----~gG~~~~~g~~ 1054 (1194)
|||||+|||+.....+++.|+++.+.|.|||+++|+++ ..+.+|+++.|. +||++++.|+.
T Consensus 857 LDEPtsGLD~~~~~~L~~~L~~l~~~G~TVIiitH~~~--~i~~aD~ii~Lgp~~G~~~G~Iv~~Gt~ 922 (943)
T PRK00349 857 LDEPTTGLHFEDIRKLLEVLHRLVDKGNTVVVIEHNLD--VIKTADWIIDLGPEGGDGGGEIVATGTP 922 (943)
T ss_pred EECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCHH--HHHhCCEEEEecCCcCCCCCEEEEeCCH
Confidence 99999999999999999999999888999999999975 346799999994 47999999975
No 293
>cd03213 ABCG_EPDR ABCG transporters are involved in eye pigment (EP) precursor transport, regulation of lipid-trafficking mechanisms, and pleiotropic drug resistance (DR). DR is a well-described phenomenon occurring in fungi and shares several similarities with processes in bacteria and higher eukaryotes. Compared to other members of the ABC transporter subfamilies, the ABCG transporter family is composed of proteins that have an ATP-binding cassette domain at the N-terminus and a TM (transmembrane) domain at the C-terminus.
Probab=100.00 E-value=6.5e-35 Score=311.22 Aligned_cols=171 Identities=54% Similarity=0.916 Sum_probs=151.9
Q ss_pred eEEeeeeeEEEeCCcEEEEEccCCCChHHHHhhhcCCC--CCCeeEEEEEEcCccCChhcccceeeEeecCCCCCCCCcH
Q 000997 842 LQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRK--TGGIIEGDIYISGYPKRQETFARISGYCEQNDIHSPGLTV 919 (1194)
Q Consensus 842 ~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~--~~~~~~G~i~i~g~~~~~~~~~~~~gyv~Q~~~~~~~lTv 919 (1194)
+.+|+|+|+++++||+++|+||||||||||+++|+|.. . +.+|+|.++|.++.....++.++|++|++.+++.+|+
T Consensus 22 ~~~l~~~~~~i~~Ge~~~l~G~nGsGKStLl~~i~Gl~~~~--~~~G~i~~~g~~~~~~~~~~~i~~~~q~~~~~~~~t~ 99 (194)
T cd03213 22 KQLLKNVSGKAKPGELTAIMGPSGAGKSTLLNALAGRRTGL--GVSGEVLINGRPLDKRSFRKIIGYVPQDDILHPTLTV 99 (194)
T ss_pred ccceecceEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC--CCceEEEECCEeCchHhhhheEEEccCcccCCCCCcH
Confidence 56999999999999999999999999999999999987 5 5689999999987654556789999999988899999
Q ss_pred HHHHHHHhhhcCCCcCcHHHHHHHHHHHHHHcCCCcccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCC
Q 000997 920 LESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSGL 999 (1194)
Q Consensus 920 ~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEPTsgL 999 (1194)
+||+.+...+. .||||||||++|||||+.+|++|+|||||+||
T Consensus 100 ~~~i~~~~~~~-------------------------------------~LS~G~~qrv~laral~~~p~illlDEP~~~L 142 (194)
T cd03213 100 RETLMFAAKLR-------------------------------------GLSGGERKRVSIALELVSNPSLLFLDEPTSGL 142 (194)
T ss_pred HHHHHHHHHhc-------------------------------------cCCHHHHHHHHHHHHHHcCCCEEEEeCCCcCC
Confidence 99997642100 49999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCeEEEEccCcEEEEeC
Q 000997 1000 DARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAG 1052 (1194)
Q Consensus 1000 D~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g 1052 (1194)
|+.++..+.+.|+++.++|+|||+++|+++.++.+.+|++++|++ |++++.|
T Consensus 143 D~~~~~~l~~~l~~~~~~~~tiii~sh~~~~~~~~~~d~v~~l~~-G~i~~~~ 194 (194)
T cd03213 143 DSSSALQVMSLLRRLADTGRTIICSIHQPSSEIFELFDKLLLLSQ-GRVIYFG 194 (194)
T ss_pred CHHHHHHHHHHHHHHHhCCCEEEEEecCchHHHHHhcCEEEEEeC-CEEEecC
Confidence 999999999999999777999999999986557778999999984 7887654
No 294
>TIGR01277 thiQ thiamine ABC transporter, ATP-binding protein. This model describes the energy-transducing ATPase subunit ThiQ of the ThiBPQ thiamine (and thiamine pyrophosphate) ABC transporter in several Proteobacteria. This protein is found so far only in Proteobacteria, and is found in complete genomes only if the ThiB and ThiP subunits are also found.
Probab=100.00 E-value=5.4e-35 Score=317.09 Aligned_cols=198 Identities=24% Similarity=0.294 Sum_probs=166.4
Q ss_pred EeeeeeEEEeCCcEEEEEccCCCChHHHHhhhcCCCCCCeeEEEEEEcCccCCh-hcccceeeEeecCCCCCCCCcHHHH
Q 000997 844 LLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ-ETFARISGYCEQNDIHSPGLTVLES 922 (1194)
Q Consensus 844 iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~-~~~~~~~gyv~Q~~~~~~~lTv~e~ 922 (1194)
+++|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++.. ...++.++|++|++.+++.+|++||
T Consensus 13 ~~~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~~~~~~~~i~~v~q~~~~~~~~t~~en 90 (213)
T TIGR01277 13 LPMEFDLNVADGEIVAIMGPSGAGKSTLLNLIAGFIE--PASGSIKVNDQSHTGLAPYQRPVSMLFQENNLFAHLTVRQN 90 (213)
T ss_pred cceeeEEEEeCCcEEEEECCCCCCHHHHHHHHhcCCC--CCCcEEEECCEEcccCChhccceEEEeccCccCCCCcHHHH
Confidence 3569999999999999999999999999999999876 468999999987642 2345679999999999999999999
Q ss_pred HHHHhhhcCCCcCcHHHHHHHHHHHHHHcCCCcccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHH
Q 000997 923 LLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSGLDAR 1002 (1194)
Q Consensus 923 l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEPTsgLD~~ 1002 (1194)
+.+...... . ......+.++++++.+++.+..+..+ ..||+|||||++||++|+.+|++|+|||||+|||+.
T Consensus 91 ~~~~~~~~~--~-~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrl~laral~~~p~llllDEPt~~LD~~ 162 (213)
T TIGR01277 91 IGLGLHPGL--K-LNAEQQEKVVDAAQQVGIADYLDRLP-----EQLSGGQRQRVALARCLVRPNPILLLDEPFSALDPL 162 (213)
T ss_pred HHhHhhccC--C-ccHHHHHHHHHHHHHcCcHHHhhCCc-----ccCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHH
Confidence 987532211 1 11122456788999999987766543 589999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCeEEEEccCcEEEEeCC
Q 000997 1003 AAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGP 1053 (1194)
Q Consensus 1003 ~~~~i~~~l~~l~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~ 1053 (1194)
++..+.+.|+++.++ |+|||+++|+++ .+.+.+|++++|. +|+++..|.
T Consensus 163 ~~~~~~~~l~~~~~~~~~tii~vsh~~~-~~~~~~d~v~~l~-~g~i~~~~~ 212 (213)
T TIGR01277 163 LREEMLALVKQLCSERQRTLLMVTHHLS-DARAIASQIAVVS-QGKIKVVSD 212 (213)
T ss_pred HHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHhhcCeEEEEE-CCeEEEecC
Confidence 999999999999764 899999999976 4667899999998 578888764
No 295
>PRK14256 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.7e-35 Score=324.78 Aligned_cols=208 Identities=21% Similarity=0.299 Sum_probs=168.3
Q ss_pred ceEEeeeeeEEEeCCcEEEEEccCCCChHHHHhhhcCCCC--CC-eeEEEEEEcCccCCh-----hcccceeeEeecCCC
Q 000997 841 RLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKT--GG-IIEGDIYISGYPKRQ-----ETFARISGYCEQNDI 912 (1194)
Q Consensus 841 ~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~--~~-~~~G~i~i~g~~~~~-----~~~~~~~gyv~Q~~~ 912 (1194)
++.+|+|+|++|++||++||+|+||||||||+++|+|..+ +. +.+|+|.++|.++.. ..+++.++|++|++.
T Consensus 16 ~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~i~~~~~~~~~~~~~i~~~~q~~~ 95 (252)
T PRK14256 16 KNHAVKDVSMDFPENSVTAIIGPSGCGKSTVLRSINRMHDLVPSARVTGKILLDDTDIYDRGVDPVSIRRRVGMVFQKPN 95 (252)
T ss_pred CeeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHHhcccCCCCCCCceEEEECCEEcccccCChHHhhccEEEEecCCC
Confidence 3579999999999999999999999999999999999854 21 247999999987632 235677999999999
Q ss_pred CCCCCcHHHHHHHHhhhcCCCcCcHHHHHHHHHHHHHHcCCCcccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEE
Q 000997 913 HSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFM 992 (1194)
Q Consensus 913 ~~~~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illL 992 (1194)
+++.+|++||+.+...... .....+..+.++++++.+++......... ..+..||||||||++||++|+.+|++|+|
T Consensus 96 ~~~~~tv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-~~~~~LS~G~~qrl~laral~~~p~llll 172 (252)
T PRK14256 96 PFPAMSIYDNVIAGYKLNG--RVNRSEADEIVESSLKRVALWDEVKDRLK-SNAMELSGGQQQRLCIARTIAVKPEVILM 172 (252)
T ss_pred CCCcCcHHHHHHhHHHhcC--CCCHHHHHHHHHHHHHHcCCchhhhHHhh-CCcCcCCHHHHHHHHHHHHHhcCCCEEEE
Confidence 9999999999987643221 11223334567888888888542111111 12468999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCeEEEEccCcEEEEeCCC
Q 000997 993 DEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1194)
Q Consensus 993 DEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~ 1054 (1194)
||||+|||+.++..+.+.|+++.+ +.|||+++|+++ ++.+.||++++|. +|+++..|+.
T Consensus 173 DEP~~gLD~~~~~~l~~~l~~~~~-~~tiiivsH~~~-~~~~~~d~i~~l~-~G~i~~~~~~ 231 (252)
T PRK14256 173 DEPASALDPISTLKIEELIEELKE-KYTIIIVTHNMQ-QAARVSDYTAFFY-MGDLVECGET 231 (252)
T ss_pred cCCcccCCHHHHHHHHHHHHHHHh-CCcEEEEECCHH-HHHhhCCEEEEEE-CCEEEEeCCH
Confidence 999999999999999999999975 689999999976 5668899999998 5899998875
No 296
>PRK11144 modC molybdate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.2e-35 Score=340.06 Aligned_cols=191 Identities=24% Similarity=0.362 Sum_probs=166.8
Q ss_pred eeeEEEeCCcEEEEEccCCCChHHHHhhhcCCCCCCeeEEEEEEcCccCCh-------hcccceeeEeecCCCCCCCCcH
Q 000997 847 NVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ-------ETFARISGYCEQNDIHSPGLTV 919 (1194)
Q Consensus 847 ~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~-------~~~~~~~gyv~Q~~~~~~~lTv 919 (1194)
|+||++++||+++|+|||||||||||++|+|..+ +.+|+|.++|.++.. ...++.+|||+|+..+++.+||
T Consensus 16 ~vsl~i~~Ge~~~l~G~nGsGKSTLl~~iaGl~~--p~~G~I~~~g~~~~~~~~~~~~~~~~~~i~~v~q~~~l~~~~tv 93 (352)
T PRK11144 16 TVNLTLPAQGITAIFGRSGAGKTSLINAISGLTR--PQKGRIVLNGRVLFDAEKGICLPPEKRRIGYVFQDARLFPHYKV 93 (352)
T ss_pred EEEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEEccccccccccchhhCCEEEEcCCcccCCCCcH
Confidence 8999999999999999999999999999999876 468999999987532 1245779999999999999999
Q ss_pred HHHHHHHhhhcCCCcCcHHHHHHHHHHHHHHcCCCcccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCC
Q 000997 920 LESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSGL 999 (1194)
Q Consensus 920 ~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEPTsgL 999 (1194)
+||+.|+.. ....+.++++++.+++.+..+..+ ..|||||||||+|||||+.+|++|+|||||+||
T Consensus 94 ~enl~~~~~---------~~~~~~~~~~l~~~gl~~~~~~~~-----~~LSgGq~qRvalaraL~~~p~llLLDEPts~L 159 (352)
T PRK11144 94 RGNLRYGMA---------KSMVAQFDKIVALLGIEPLLDRYP-----GSLSGGEKQRVAIGRALLTAPELLLMDEPLASL 159 (352)
T ss_pred HHHHHhhhh---------hhhHHHHHHHHHHcCCchhhhCCc-----ccCCHHHHHHHHHHHHHHcCCCEEEEcCCcccC
Confidence 999988532 112345788999999987777653 589999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCeEEEEccCcEEEEeCCCC
Q 000997 1000 DARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLG 1055 (1194)
Q Consensus 1000 D~~~~~~i~~~l~~l~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~~ 1055 (1194)
|+.++..+++.|++++++ |.|||++||+++ ++...+|++++|+ +|+++..|+..
T Consensus 160 D~~~~~~l~~~L~~l~~~~g~tii~vTHd~~-~~~~~~d~i~~l~-~G~i~~~g~~~ 214 (352)
T PRK11144 160 DLPRKRELLPYLERLAREINIPILYVSHSLD-EILRLADRVVVLE-QGKVKAFGPLE 214 (352)
T ss_pred CHHHHHHHHHHHHHHHHhcCCeEEEEecCHH-HHHHhCCEEEEEe-CCEEEEecCHH
Confidence 999999999999999765 899999999986 5778899999998 47999988753
No 297
>PRK13640 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=8.1e-35 Score=328.61 Aligned_cols=202 Identities=23% Similarity=0.300 Sum_probs=169.6
Q ss_pred eEEeeeeeEEEeCCcEEEEEccCCCChHHHHhhhcCCCCCCe-eEEEEEEcCccCCh---hcccceeeEeecCCC-CCCC
Q 000997 842 LQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGI-IEGDIYISGYPKRQ---ETFARISGYCEQNDI-HSPG 916 (1194)
Q Consensus 842 ~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~-~~G~i~i~g~~~~~---~~~~~~~gyv~Q~~~-~~~~ 916 (1194)
+.+|+|||++|++||++||+||||||||||+++|+|...+.. ..|+|.++|.++.. ...++.+|||+|++. .++.
T Consensus 20 ~~~l~~v~l~i~~Ge~~~I~G~nGaGKSTLl~~l~G~~~p~~g~~G~i~i~g~~~~~~~~~~~~~~ig~v~q~~~~~~~~ 99 (282)
T PRK13640 20 KPALNDISFSIPRGSWTALIGHNGSGKSTISKLINGLLLPDDNPNSKITVDGITLTAKTVWDIREKVGIVFQNPDNQFVG 99 (282)
T ss_pred ccceeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcccCCCCCCCcEEEECCEECCcCCHHHHHhheEEEEECHHHhhcc
Confidence 469999999999999999999999999999999999865311 13899999988643 234567999999974 5677
Q ss_pred CcHHHHHHHHhhhcCCCcCcHHHHHHHHHHHHHHcCCCcccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCC
Q 000997 917 LTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPT 996 (1194)
Q Consensus 917 lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEPT 996 (1194)
.||+||+.|..... ....++..+.++++++.++|.+..+..+ +.||||||||++||+||+.+|++|+|||||
T Consensus 100 ~tv~enl~~~~~~~---~~~~~~~~~~~~~~l~~~~L~~~~~~~~-----~~LS~G~~qrv~laral~~~P~llllDEPt 171 (282)
T PRK13640 100 ATVGDDVAFGLENR---AVPRPEMIKIVRDVLADVGMLDYIDSEP-----ANLSGGQKQRVAIAGILAVEPKIIILDEST 171 (282)
T ss_pred CCHHHHHHhhHHhC---CCCHHHHHHHHHHHHHHCCChhHhcCCc-----ccCCHHHHHHHHHHHHHHcCCCEEEEECCc
Confidence 89999998764322 2234445567888999999987766543 589999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCeEEEEccCcEEEEeCCC
Q 000997 997 SGLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1194)
Q Consensus 997 sgLD~~~~~~i~~~l~~l~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~ 1054 (1194)
+|||+.++..+++.|++++++ |+|||++||+++. + +.||++++|+ +|++++.|+.
T Consensus 172 ~gLD~~~~~~l~~~l~~l~~~~g~tvli~tH~~~~-~-~~~d~i~~l~-~G~i~~~g~~ 227 (282)
T PRK13640 172 SMLDPAGKEQILKLIRKLKKKNNLTVISITHDIDE-A-NMADQVLVLD-DGKLLAQGSP 227 (282)
T ss_pred ccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHH-H-HhCCEEEEEE-CCEEEEeCCH
Confidence 999999999999999999765 9999999999863 4 5799999998 5799999875
No 298
>cd03257 ABC_NikE_OppD_transporters The ABC transporter subfamily specific for the transport of dipeptides, oligopeptides (OppD), and nickel (NikDE). The NikABCDE system of E. coli belongs to this family and is composed of the periplasmic binding protein NikA, two integral membrane components (NikB and NikC), and two ATPase (NikD and NikE). The NikABCDE transporter is synthesized under anaerobic conditions to meet the increased demand for nickel resulting from hydrogenase synthesis. The molecular mechanism of nickel uptake in many bacteria and most archaea is not known. Many other members of this ABC family are also involved in the uptake of dipeptides and oligopeptides. The oligopeptide transport system (Opp) is a five-component ABC transport composed of a membrane-anchored substrate binding proteins (SRP), OppA, two transmembrane proteins, OppB and OppC, and two ATP-binding domains, OppD and OppF.
Probab=100.00 E-value=1.1e-34 Score=318.36 Aligned_cols=201 Identities=28% Similarity=0.349 Sum_probs=162.8
Q ss_pred eeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCceeeEEEECCccCCCCC------CCceEEEEecCC--CC
Q 000997 149 TILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV------PPRTSAYVSQQD--WQ 220 (1194)
Q Consensus 149 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~~------~~~~~~yv~Q~d--~~ 220 (1194)
++|+|+|+++++|++++|+|||||||||||++|+|.+++. +|+|.++|.++.... .++.++|++|++ .+
T Consensus 19 ~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~i~~~~q~~~~~~ 95 (228)
T cd03257 19 KALDDVSFSIKKGETLGLVGESGSGKSTLARAILGLLKPT---SGSIIFDGKDLLKLSRRLRKIRRKEIQMVFQDPMSSL 95 (228)
T ss_pred eeecCceeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEEccccchhhHHHhhccEEEEecCchhhc
Confidence 6999999999999999999999999999999999998776 999999998875432 246799999998 45
Q ss_pred CCCCCHHHHHHHhhhccCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhccCcchhHHHHHHHHHhCCc-ccccccc
Q 000997 221 VAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLD-TCADTLV 299 (1194)
Q Consensus 221 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~k~~~~~~~~~~~~~~~~l~~lgL~-~~~dt~v 299 (1194)
++.+||+||+.+.....+..... + .....++.+++.+||. ...+..+
T Consensus 96 ~~~~tv~~nl~~~~~~~~~~~~~---------~-----------------------~~~~~~~~~l~~~~l~~~~~~~~~ 143 (228)
T cd03257 96 NPRMTIGEQIAEPLRIHGKLSKK---------E-----------------------ARKEAVLLLLVGVGLPEEVLNRYP 143 (228)
T ss_pred CCcCCHHHHHHHHHHhccCCcHH---------H-----------------------HHHHHHHHHHHHCCCChhHhhCCc
Confidence 67899999998764332110000 0 0011134678888985 4555544
Q ss_pred cCccCCCCChhhhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEE
Q 000997 300 GDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVI 379 (1194)
Q Consensus 300 g~~~~~~LSGGqkqRvsia~al~~~~~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vi 379 (1194)
..|||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|+++++.. +++|+.++|..+++..++|+|+
T Consensus 144 -----~~LS~G~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~-~~tii~~sH~~~~~~~~~d~i~ 217 (228)
T cd03257 144 -----HELSGGQRQRVAIARALALNPKLLIADEPTSALDVSVQAQILDLLKKLQEEL-GLTLLFITHDLGVVAKIADRVA 217 (228)
T ss_pred -----hhcCHHHHHHHHHHHHHhcCCCEEEecCCCCCCCHHHHHHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHhcCeEE
Confidence 4699999999999999999999999999999999999999999999987532 3456667888889999999999
Q ss_pred EEcCCeEEEec
Q 000997 380 LLSEGQIVYQG 390 (1194)
Q Consensus 380 lL~~G~iv~~G 390 (1194)
+|++|+++..|
T Consensus 218 ~l~~G~i~~~g 228 (228)
T cd03257 218 VMYAGKIVEEG 228 (228)
T ss_pred EEeCCEEEecC
Confidence 99999998765
No 299
>TIGR00972 3a0107s01c2 phosphate ABC transporter, ATP-binding protein. This model represents the ATP-binding protein of a family of ABC transporters for inorganic phosphate. In the model species Escherichia coli, a constitutive transporter for inorganic phosphate, with low affinity, is also present. The high affinity transporter that includes this polypeptide is induced when extracellular phosphate concentrations are low. The proteins most similar to the members of this family but not included appear to be amino acid transporters.
Probab=100.00 E-value=1.2e-34 Score=321.65 Aligned_cols=206 Identities=23% Similarity=0.367 Sum_probs=169.5
Q ss_pred eeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCC--CceeeEEEECCccCCCC-----CCCceEEEEecCCCCC
Q 000997 149 TILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHH--LQVSGKITYNGHGFKEF-----VPPRTSAYVSQQDWQV 221 (1194)
Q Consensus 149 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~--~~~~G~i~~~G~~~~~~-----~~~~~~~yv~Q~d~~~ 221 (1194)
.+|+|+|++|++||+++|+|||||||||||++|+|.++|. .+.+|+|.++|.++... ..++.++|++|++.++
T Consensus 15 ~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~v~q~~~~~ 94 (247)
T TIGR00972 15 EALKNINLDIPKNQVTALIGPSGCGKSTLLRSLNRMNDLVPGVRIEGKVLFDGQDIYDKKIDVVELRRRVGMVFQKPNPF 94 (247)
T ss_pred eeecceeEEECCCCEEEEECCCCCCHHHHHHHHhccCCCCcCCCCceEEEECCEEccccccchHHHHhheEEEecCcccC
Confidence 5999999999999999999999999999999999998753 12389999999887542 1246799999999888
Q ss_pred CCCCHHHHHHHhhhccCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhccCcchhHHHHHHHHHhCCc----ccccc
Q 000997 222 AEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLD----TCADT 297 (1194)
Q Consensus 222 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~k~~~~~~~~~~~~~~~~l~~lgL~----~~~dt 297 (1194)
+ +||+||+.+.....+.... .+....++.+++.+||. +..++
T Consensus 95 ~-~tv~e~l~~~~~~~~~~~~---------------------------------~~~~~~~~~~l~~~~l~~~~~~~~~~ 140 (247)
T TIGR00972 95 P-MSIYDNIAYGPRLHGIKDK---------------------------------KELDEIVEESLKKAALWDEVKDRLHD 140 (247)
T ss_pred C-CCHHHHHHhHHHhcCCCCH---------------------------------HHHHHHHHHHHHHcCCCcchhhHhhC
Confidence 8 9999999886433210000 00112367788999997 54554
Q ss_pred cccCccCCCCChhhhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCe
Q 000997 298 LVGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDD 377 (1194)
Q Consensus 298 ~vg~~~~~~LSGGqkqRvsia~al~~~~~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~ 377 (1194)
.+ +.|||||||||+||+||+.+|++++|||||+|||+.+...+.+.|+++++ + .+|+.++|...++.+++|+
T Consensus 141 ~~-----~~LSgG~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~--~-~tiiivsH~~~~~~~~~d~ 212 (247)
T TIGR00972 141 SA-----LGLSGGQQQRLCIARALAVEPEVLLLDEPTSALDPIATGKIEELIQELKK--K-YTIVIVTHNMQQAARISDR 212 (247)
T ss_pred Cc-----ccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHh--c-CeEEEEecCHHHHHHhCCE
Confidence 44 46999999999999999999999999999999999999999999998865 3 5666688999999999999
Q ss_pred EEEEcCCeEEEecChhhHH
Q 000997 378 VILLSEGQIVYQGPRVSVL 396 (1194)
Q Consensus 378 vilL~~G~iv~~G~~~~~~ 396 (1194)
|++|++|++++.|+.+++.
T Consensus 213 i~~l~~G~i~~~~~~~~~~ 231 (247)
T TIGR00972 213 TAFFYDGELVEYGPTEQIF 231 (247)
T ss_pred EEEEECCEEEEeCCHHHHH
Confidence 9999999999999987763
No 300
>PRK15093 antimicrobial peptide ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.9e-35 Score=335.57 Aligned_cols=210 Identities=16% Similarity=0.210 Sum_probs=168.2
Q ss_pred ceEEeeeeeEEEeCCcEEEEEccCCCChHHHHhhhcCCCCC--CeeEEEEEEcCccCCh---hc----ccceeeEeecCC
Q 000997 841 RLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTG--GIIEGDIYISGYPKRQ---ET----FARISGYCEQND 911 (1194)
Q Consensus 841 ~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~--~~~~G~i~i~g~~~~~---~~----~~~~~gyv~Q~~ 911 (1194)
...+|+||||+|++||++||+|+||||||||+++|+|..+. .+.+|+|.++|.++.. .. +++.++||+|++
T Consensus 19 ~~~~l~~vsl~i~~Ge~~~ivG~sGsGKSTLl~~i~Gl~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~~~i~~v~Q~~ 98 (330)
T PRK15093 19 WVKAVDRVSMTLTEGEIRGLVGESGSGKSLIAKAICGVTKDNWRVTADRMRFDDIDLLRLSPRERRKLVGHNVSMIFQEP 98 (330)
T ss_pred CEEEEeeeEEEECCCCEEEEECCCCCCHHHHHHHHHccCCCCCCCcceEEEECCEECCcCCHHHHHHHhCCCEEEEecCc
Confidence 46799999999999999999999999999999999998642 2468999999987632 11 234699999997
Q ss_pred C--CCCCCcHHHHHHHHhhhcCCCc---CcHHHHHHHHHHHHHHcCCCcccCCcccCCCCCCCCHHHHHHHHHHHHHhhC
Q 000997 912 I--HSPGLTVLESLLFSAWLRLPSE---IELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVAN 986 (1194)
Q Consensus 912 ~--~~~~lTv~e~l~f~~~lr~~~~---~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~ 986 (1194)
. +.|.+||.+++.+......... ....+..+.+.++++.++|.+..+.... .+.+|||||||||+||+||+.+
T Consensus 99 ~~~l~p~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gL~~~~~~~~~--~p~~LSgG~~QRv~iArAL~~~ 176 (330)
T PRK15093 99 QSCLDPSERVGRQLMQNIPGWTYKGRWWQRFGWRKRRAIELLHRVGIKDHKDAMRS--FPYELTEGECQKVMIAIALANQ 176 (330)
T ss_pred chhcCccccHHHHHHHHHHhhhccccccccHHHHHHHHHHHHHHCCCCChHHHHhC--CchhCCHHHHHHHHHHHHHHCC
Confidence 5 5688999999976422110000 0112334567899999999753221111 2358999999999999999999
Q ss_pred CCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCeEEEEccCcEEEEeCCC
Q 000997 987 PSIVFMDEPTSGLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1194)
Q Consensus 987 p~illLDEPTsgLD~~~~~~i~~~l~~l~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~ 1054 (1194)
|+||+|||||+|||+.++..++++|+++.++ |.|||+||||++ .+.+.+|++++|. +|+++..|+.
T Consensus 177 P~llilDEPts~LD~~~~~~i~~lL~~l~~~~g~tii~itHdl~-~v~~~~dri~vm~-~G~ive~g~~ 243 (330)
T PRK15093 177 PRLLIADEPTNAMEPTTQAQIFRLLTRLNQNNNTTILLISHDLQ-MLSQWADKINVLY-CGQTVETAPS 243 (330)
T ss_pred CCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHH-HHHHhCCEEEEEE-CCEEEEECCH
Confidence 9999999999999999999999999999874 999999999976 4667899999998 5899999975
No 301
>KOG0055 consensus Multidrug/pheromone exporter, ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=1.9e-35 Score=367.06 Aligned_cols=214 Identities=26% Similarity=0.390 Sum_probs=177.9
Q ss_pred cCCCcceeeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCceeeEEEECCccCCCCCC---CceEEEEecCC
Q 000997 142 RGNRSKLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVP---PRTSAYVSQQD 218 (1194)
Q Consensus 142 ~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~~~---~~~~~yv~Q~d 218 (1194)
++.+++.+||+|+|+++++|+.+||+|||||||||...+|-..++|. +|.|.++|.+++.... ++.+|.|+|+|
T Consensus 997 YPsRP~~~Il~~l~l~i~~GqTvALVG~SGsGKSTvI~LLeRfYdp~---~G~V~IDg~dik~lnl~~LR~~i~lVsQEP 1073 (1228)
T KOG0055|consen 997 YPTRPDVPVLNNLSLSIRAGQTVALVGPSGSGKSTVISLLERFYDPD---AGKVKIDGVDIKDLNLKWLRKQIGLVSQEP 1073 (1228)
T ss_pred CCCCCCchhhcCCcEEecCCCEEEEECCCCCCHHHHHHHHHHhcCCC---CCeEEECCcccccCCHHHHHHhcceeccCc
Confidence 44567789999999999999999999999999999999999999886 9999999999988764 68899999999
Q ss_pred CCCCCCCHHHHHHHhhhccCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhccCcchhHHHHHHHHHhCCccccccc
Q 000997 219 WQVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTL 298 (1194)
Q Consensus 219 ~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~k~~~~~~~~~~~~~~~~l~~lgL~~~~dt~ 298 (1194)
.+|. .|+||||.|+.. ....+.+.++++... ..+. +.+|++++||.
T Consensus 1074 ~LF~-~TIrENI~YG~~----~vs~~eIi~Aak~AN--------------------------aH~F---I~sLP~GyDT~ 1119 (1228)
T KOG0055|consen 1074 VLFN-GTIRENIAYGSE----EVSEEEIIEAAKLAN--------------------------AHNF---ISSLPQGYDTR 1119 (1228)
T ss_pred hhhc-ccHHHHHhccCC----CCCHHHHHHHHHHhh--------------------------hHHH---HhcCcCcccCc
Confidence 9776 499999999721 111222222222111 1111 45799999999
Q ss_pred ccCccCCCCChhhhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeE
Q 000997 299 VGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDV 378 (1194)
Q Consensus 299 vg~~~~~~LSGGqkqRvsia~al~~~~~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~v 378 (1194)
||+++. .||||||||++||||++.||+||||||.||+||+++.+-+.+.|.+.. .++|+|++.|. ..+...+|.|
T Consensus 1120 vGerG~-QLSGGQKQRIAIARAilRnPkILLLDEATSALDseSErvVQeALd~a~--~gRT~IvIAHR--LSTIqnaD~I 1194 (1228)
T KOG0055|consen 1120 VGERGV-QLSGGQKQRIAIARAILRNPKILLLDEATSALDSESERVVQEALDRAM--EGRTTIVIAHR--LSTIQNADVI 1194 (1228)
T ss_pred cCcccC-cCCchHHHHHHHHHHHHcCCCeeeeeccchhhhhhhHHHHHHHHHHhh--cCCcEEEEecc--hhhhhcCCEE
Confidence 998765 699999999999999999999999999999999999999999999865 36777764433 3467889999
Q ss_pred EEEcCCeEEEecChhhHHH
Q 000997 379 ILLSEGQIVYQGPRVSVLD 397 (1194)
Q Consensus 379 ilL~~G~iv~~G~~~~~~~ 397 (1194)
+|+++|+|+++|++++++.
T Consensus 1195 ~Vi~~G~VvE~GtH~~L~~ 1213 (1228)
T KOG0055|consen 1195 AVLKNGKVVEQGTHDELLA 1213 (1228)
T ss_pred EEEECCEEEecccHHHHHh
Confidence 9999999999999999975
No 302
>TIGR02211 LolD_lipo_ex lipoprotein releasing system, ATP-binding protein. This model represents LolD, a member of the ABC transporter family (pfam00005). LolD is involved in localization of lipoproteins in some bacteria. It works with a transmembrane protein LolC, which in some species is a paralogous pair LolC and LolE. Depending on whether the residue immediately following the new, modified N-terminal Cys residue, the nascent lipoprotein may be carried further by LolA and LolB to the outer membrane, or remain at the inner membrane. The top scoring proteins excluded by this model include homologs from the archaeal genus Methanosarcina.
Probab=100.00 E-value=9e-35 Score=317.43 Aligned_cols=196 Identities=20% Similarity=0.335 Sum_probs=161.2
Q ss_pred eeeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCceeeEEEECCccCCCCCC-------CceEEEEecCCCC
Q 000997 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVP-------PRTSAYVSQQDWQ 220 (1194)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~~~-------~~~~~yv~Q~d~~ 220 (1194)
+++|+|+|+++++|++++|+|||||||||||++|+|.+++. +|+|.++|.++..... ++.++|++|++.+
T Consensus 18 ~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~i~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~~i~~v~q~~~~ 94 (221)
T TIGR02211 18 TRVLKGVSLSIGKGEIVAIVGSSGSGKSTLLHLLGGLDNPT---SGEVLFNGQSLSKLSSNERAKLRNKKLGFIYQFHHL 94 (221)
T ss_pred eEeEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEEhhhcCHhHHHHHHHhcEEEEeccccc
Confidence 46999999999999999999999999999999999998876 9999999988755332 2569999999988
Q ss_pred CCCCCHHHHHHHhhhccCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhccCcchhHHHHHHHHHhCCccccccccc
Q 000997 221 VAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVG 300 (1194)
Q Consensus 221 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~k~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg 300 (1194)
++.+||+||+.+......... .+....+.++++.+||++..+..+
T Consensus 95 ~~~~tv~~~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~- 139 (221)
T TIGR02211 95 LPDFTALENVAMPLLIGKKSV----------------------------------KEAKERAYEMLEKVGLEHRINHRP- 139 (221)
T ss_pred CCCCcHHHHHHHHHHhcCCCH----------------------------------HHHHHHHHHHHHHcCChhhhhCCh-
Confidence 889999999988543211000 001123667889999987666655
Q ss_pred CccCCCCChhhhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEE
Q 000997 301 DEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVIL 380 (1194)
Q Consensus 301 ~~~~~~LSGGqkqRvsia~al~~~~~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vil 380 (1194)
..|||||||||+||++|+.+|++|+|||||+|||..++..+.+.|+++++..+ .+|+.++|+..++. .+|+|++
T Consensus 140 ----~~LS~G~~qrv~laral~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~-~tii~~tH~~~~~~-~~d~v~~ 213 (221)
T TIGR02211 140 ----SELSGGERQRVAIARALVNQPSLVLADEPTGNLDNNNAKIIFDLMLELNRELN-TSFLVVTHDLELAK-KLDRVLE 213 (221)
T ss_pred ----hhCCHHHHHHHHHHHHHhCCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcC-CEEEEEeCCHHHHh-hcCEEEE
Confidence 46999999999999999999999999999999999999999999999875434 45555777777775 4799999
Q ss_pred EcCCeEE
Q 000997 381 LSEGQIV 387 (1194)
Q Consensus 381 L~~G~iv 387 (1194)
|++|+++
T Consensus 214 l~~G~i~ 220 (221)
T TIGR02211 214 MKDGQLF 220 (221)
T ss_pred EeCCEec
Confidence 9999985
No 303
>PRK15112 antimicrobial peptide ABC system ATP-binding protein SapF; Provisional
Probab=100.00 E-value=5.4e-35 Score=327.76 Aligned_cols=202 Identities=21% Similarity=0.307 Sum_probs=168.5
Q ss_pred eEEeeeeeEEEeCCcEEEEEccCCCChHHHHhhhcCCCCCCeeEEEEEEcCccCCh---hcccceeeEeecCCC--CCCC
Q 000997 842 LQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ---ETFARISGYCEQNDI--HSPG 916 (1194)
Q Consensus 842 ~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~---~~~~~~~gyv~Q~~~--~~~~ 916 (1194)
+.+|+|+|+++++||++||+|||||||||||++|+|..+ +.+|+|.++|.++.. ...++.++|++|++. +.+.
T Consensus 26 ~~~l~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~~~~~~~ 103 (267)
T PRK15112 26 VEAVKPLSFTLREGQTLAIIGENGSGKSTLAKMLAGMIE--PTSGELLIDDHPLHFGDYSYRSQRIRMIFQDPSTSLNPR 103 (267)
T ss_pred cceeeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhCCCC--CCCCEEEECCEECCCCchhhHhccEEEEecCchhhcCcc
Confidence 469999999999999999999999999999999999876 468999999987642 123456999999875 5678
Q ss_pred CcHHHHHHHHhhhcCCCcCcHHHHHHHHHHHHHHcCCC-cccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCC
Q 000997 917 LTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELT-SLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEP 995 (1194)
Q Consensus 917 lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~-~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEP 995 (1194)
+|+.+++.+...... ........+.++++++.+++. ...+.. +..|||||||||+||++|+.+|+||+||||
T Consensus 104 ~tv~~~l~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~~LS~G~~qrv~laral~~~p~lllLDEP 176 (267)
T PRK15112 104 QRISQILDFPLRLNT--DLEPEQREKQIIETLRQVGLLPDHASYY-----PHMLAPGQKQRLGLARALILRPKVIIADEA 176 (267)
T ss_pred hhHHHHHHHHHHhcc--CCCHHHHHHHHHHHHHHcCCChHHHhcC-----chhcCHHHHHHHHHHHHHHhCCCEEEEcCC
Confidence 899999988654331 122333445678899999994 455543 357999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCeEEEEccCcEEEEeCCC
Q 000997 996 TSGLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1194)
Q Consensus 996 TsgLD~~~~~~i~~~l~~l~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~ 1054 (1194)
|+|||+.++..+.+.|++++++ |.|||+++|+++ ++...||++++|+ +|+++..|+.
T Consensus 177 t~~LD~~~~~~l~~~l~~~~~~~g~tviivsH~~~-~~~~~~d~i~~l~-~G~i~~~~~~ 234 (267)
T PRK15112 177 LASLDMSMRSQLINLMLELQEKQGISYIYVTQHLG-MMKHISDQVLVMH-QGEVVERGST 234 (267)
T ss_pred cccCCHHHHHHHHHHHHHHHHHcCcEEEEEeCCHH-HHHHhcCEEEEEE-CCEEEecCCH
Confidence 9999999999999999999764 899999999986 5667799999998 5789888864
No 304
>PRK11022 dppD dipeptide transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.5e-34 Score=331.67 Aligned_cols=213 Identities=19% Similarity=0.232 Sum_probs=172.7
Q ss_pred eeeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCC-ceeeEEEECCccCCCCCC-------CceEEEEecCC-
Q 000997 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHL-QVSGKITYNGHGFKEFVP-------PRTSAYVSQQD- 218 (1194)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~-~~~G~i~~~G~~~~~~~~-------~~~~~yv~Q~d- 218 (1194)
..+|+||||+|++||+++|+|+||||||||+++|+|++++.. ..+|+|.++|.++..... ++.++||+|++
T Consensus 20 ~~~l~~vsl~i~~Ge~~~lvG~sGsGKSTL~~~l~Gll~~~~~~~~G~i~~~G~~i~~~~~~~~~~~r~~~i~~v~Q~~~ 99 (326)
T PRK11022 20 FRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISEKERRNLVGAEVAMIFQDPM 99 (326)
T ss_pred EEEEeeeEEEECCCCEEEEECCCCChHHHHHHHHHcCCCCCCCCcceEEEECCEECCcCCHHHHHHHhCCCEEEEecCch
Confidence 569999999999999999999999999999999999986421 358999999998765431 24699999998
Q ss_pred -CCCCCCCHHHHHHHhhhccCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhccCcchhHHHHHHHHHhCCcccccc
Q 000997 219 -WQVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADT 297 (1194)
Q Consensus 219 -~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~k~~~~~~~~~~~~~~~~l~~lgL~~~~dt 297 (1194)
.+.|.+||.+++....+...... ..+...+++++|+.+||++..+.
T Consensus 100 ~~l~p~~~v~~~i~~~l~~~~~~~---------------------------------~~~~~~~~~~~L~~~gL~~~~~~ 146 (326)
T PRK11022 100 TSLNPCYTVGFQIMEAIKVHQGGN---------------------------------KKTRRQRAIDLLNQVGIPDPASR 146 (326)
T ss_pred hhcCCcCCHHHHHHHHHHHhcCCC---------------------------------HHHHHHHHHHHHHHCCCCChHHH
Confidence 47889999999876543211000 00112347788999999752111
Q ss_pred cccCccCCCCChhhhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCe
Q 000997 298 LVGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDD 377 (1194)
Q Consensus 298 ~vg~~~~~~LSGGqkqRvsia~al~~~~~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~ 377 (1194)
-+.....|||||||||+||+||+.+|++|++||||+|||+.++.++++.|+++.+.. +.+++.++|+...+.+++|+
T Consensus 147 --l~~~p~~LSgGq~QRv~iArAL~~~P~llilDEPts~LD~~~~~~il~lL~~l~~~~-g~til~iTHdl~~~~~~adr 223 (326)
T PRK11022 147 --LDVYPHQLSGGMSQRVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKE-NMALVLITHDLALVAEAAHK 223 (326)
T ss_pred --HhCCchhCCHHHHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhc-CCEEEEEeCCHHHHHHhCCE
Confidence 123456799999999999999999999999999999999999999999999987644 45677788999999999999
Q ss_pred EEEEcCCeEEEecChhhHH
Q 000997 378 VILLSEGQIVYQGPRVSVL 396 (1194)
Q Consensus 378 vilL~~G~iv~~G~~~~~~ 396 (1194)
|++|++|+++..|+.+++.
T Consensus 224 i~vm~~G~ive~g~~~~~~ 242 (326)
T PRK11022 224 IIVMYAGQVVETGKAHDIF 242 (326)
T ss_pred EEEEECCEEEEECCHHHHh
Confidence 9999999999999998874
No 305
>COG1245 Predicted ATPase, RNase L inhibitor (RLI) homolog [General function prediction only]
Probab=100.00 E-value=2.5e-34 Score=318.57 Aligned_cols=169 Identities=25% Similarity=0.307 Sum_probs=132.9
Q ss_pred eEEEeCCcEEEEEccCCCChHHHHhhhcCCCCCCeeEEEEEEcCccCChhcccceeeEeecCCCCCCCCcHHHHHHHHhh
Q 000997 849 TGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQETFARISGYCEQNDIHSPGLTVLESLLFSAW 928 (1194)
Q Consensus 849 s~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~~~~~~~gyv~Q~~~~~~~lTv~e~l~f~~~ 928 (1194)
.++++.||+++++||||-||||+.++|+|..+ +.+|+ .. .-.++|=||--.--...||++.|.-...
T Consensus 361 ~G~i~~gEvigilGpNgiGKTTFvk~LAG~ik--Pdeg~----~~-------~~~vSyKPQyI~~~~~gtV~~~l~~~~~ 427 (591)
T COG1245 361 EGEIYDGEVIGILGPNGIGKTTFVKLLAGVIK--PDEGS----EE-------DLKVSYKPQYISPDYDGTVEDLLRSAIR 427 (591)
T ss_pred CCeeecceEEEEECCCCcchHHHHHHHhcccc--CCCCC----Cc-------cceEeecceeecCCCCCcHHHHHHHhhh
Confidence 46788999999999999999999999999876 34665 11 1236788886444457799998754322
Q ss_pred hcCCCcCcHHHHHHHHHHHHHHcCCCcccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHH
Q 000997 929 LRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSGLDARAAAIVM 1008 (1194)
Q Consensus 929 lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~ 1008 (1194)
-+... .-...++++-|.|.++.+..+ .+|||||.|||+||.+|.++.+|.+||||++.||.+.+..+-
T Consensus 428 ~~~~~-------s~~~~ei~~pl~l~~i~e~~v-----~~LSGGELQRvaIaa~L~reADlYllDEPSA~LDvEqR~~va 495 (591)
T COG1245 428 SAFGS-------SYFKTEIVKPLNLEDLLERPV-----DELSGGELQRVAIAAALSREADLYLLDEPSAYLDVEQRIIVA 495 (591)
T ss_pred hhccc-------chhHHhhcCccchHHHHhccc-----ccCCchhHHHHHHHHHhccccCEEEecCchhhccHHHHHHHH
Confidence 11111 123467888888888888765 589999999999999999999999999999999999999999
Q ss_pred HHHHHHHh-CCCEEEEEecCCcHHHHHhcCeEEEEc
Q 000997 1009 RTVRNIVN-TGRTIVCTIHQPSIDIFESFDELLFMK 1043 (1194)
Q Consensus 1009 ~~l~~l~~-~g~tvi~~~H~~~~~~~~~~d~~~~l~ 1043 (1194)
+.||++.. ++.|.+++-||.-+ +--..||++|..
T Consensus 496 kvIRR~~e~~~kta~vVdHDi~~-~dyvsDr~ivF~ 530 (591)
T COG1245 496 KVIRRFIENNEKTALVVDHDIYM-IDYVSDRLIVFE 530 (591)
T ss_pred HHHHHHHhhcCceEEEEecceeh-hhhhhceEEEEe
Confidence 99999975 48999999999653 333468888775
No 306
>COG0444 DppD ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.1e-34 Score=316.30 Aligned_cols=215 Identities=22% Similarity=0.309 Sum_probs=179.6
Q ss_pred ceeeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHhcCcC-C-CCceeeEEEECCccCCCCC-------CCceEEEEecC
Q 000997 147 KLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLG-H-HLQVSGKITYNGHGFKEFV-------PPRTSAYVSQQ 217 (1194)
Q Consensus 147 ~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~-~-~~~~~G~i~~~G~~~~~~~-------~~~~~~yv~Q~ 217 (1194)
...+++||||.+++||+++|+|.|||||||+.++|+|+++ + ....+|+|.|+|.++-.+. ..+.++||+|+
T Consensus 17 ~v~av~~vs~~i~~GE~lgiVGESGsGKS~~~~aim~llp~~~~~i~~G~i~f~g~~l~~l~~~~~~~iRG~~I~mIfQ~ 96 (316)
T COG0444 17 VVKAVDGVSFELKKGEILGIVGESGSGKSVLAKAIMGLLPKPNARIVGGEILFDGKDLLSLSEKELRKIRGKEIAMIFQD 96 (316)
T ss_pred cEEEEeceeEEEcCCcEEEEEcCCCCCHHHHHHHHHhccCCCCCeEeeeEEEECCcccccCCHHHHHhhcCceEEEEEcC
Confidence 4679999999999999999999999999999999999997 4 4457899999999765443 13589999999
Q ss_pred C--CCCCCCCHHHHHHHhhhccCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhccCcchhHHHHHHHHHhCCcccc
Q 000997 218 D--WQVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCA 295 (1194)
Q Consensus 218 d--~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~k~~~~~~~~~~~~~~~~l~~lgL~~~~ 295 (1194)
+ .+.|.+||.+.+.-..+.+.... ...+...++.++|+.+||++-.
T Consensus 97 p~~sLnPv~~Ig~Qi~E~l~~h~~~~--------------------------------~~~ea~~~a~~~L~~Vgi~~~~ 144 (316)
T COG0444 97 PMTSLNPVMTIGDQIAEVLRLHGKGL--------------------------------SKKEAKERAIELLELVGIPDPE 144 (316)
T ss_pred chhhcCChhhHHHHHHHHHHHhhcch--------------------------------hhHHHHHHHHHHHHHcCCCCHH
Confidence 6 57888999998866544321100 0011234577889999998742
Q ss_pred cccccCccCCCCChhhhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhc
Q 000997 296 DTLVGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELF 375 (1194)
Q Consensus 296 dt~vg~~~~~~LSGGqkqRvsia~al~~~~~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~ 375 (1194)
. +-+.+...|||||||||.||.||+.+|++|+.||||++||..++.+|++.|+++.+. .+++++.++|+..-+.++|
T Consensus 145 ~--~~~~YPhelSGGMrQRV~IAmala~~P~LlIADEPTTALDvt~QaqIl~Ll~~l~~e-~~~aiilITHDl~vva~~a 221 (316)
T COG0444 145 R--RLKSYPHELSGGMRQRVMIAMALALNPKLLIADEPTTALDVTVQAQILDLLKELQRE-KGTALILITHDLGVVAEIA 221 (316)
T ss_pred H--HHhhCCcccCCcHHHHHHHHHHHhCCCCEEEeCCCcchhhHHHHHHHHHHHHHHHHh-cCCEEEEEeCCHHHHHHhc
Confidence 2 335677889999999999999999999999999999999999999999999999874 4677888999999999999
Q ss_pred CeEEEEcCCeEEEecChhhHH
Q 000997 376 DDVILLSEGQIVYQGPRVSVL 396 (1194)
Q Consensus 376 D~vilL~~G~iv~~G~~~~~~ 396 (1194)
|+|+||+.|+||+.|+.+++.
T Consensus 222 Dri~VMYaG~iVE~g~~~~i~ 242 (316)
T COG0444 222 DRVAVMYAGRIVEEGPVEEIF 242 (316)
T ss_pred ceEEEEECcEEEEeCCHHHHh
Confidence 999999999999999998873
No 307
>PRK13633 cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.7e-35 Score=329.70 Aligned_cols=201 Identities=24% Similarity=0.302 Sum_probs=169.7
Q ss_pred eEEeeeeeEEEeCCcEEEEEccCCCChHHHHhhhcCCCCCCeeEEEEEEcCccCCh----hcccceeeEeecCCC-CCCC
Q 000997 842 LQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ----ETFARISGYCEQNDI-HSPG 916 (1194)
Q Consensus 842 ~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~----~~~~~~~gyv~Q~~~-~~~~ 916 (1194)
+.+|+|||++|++||+++|+|+||||||||+++|+|... +.+|+|.++|.++.. ...++.+||++|++. .+..
T Consensus 23 ~~vl~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--~~~G~i~i~g~~i~~~~~~~~~~~~i~~v~q~~~~~~~~ 100 (280)
T PRK13633 23 KLALDDVNLEVKKGEFLVILGRNGSGKSTIAKHMNALLI--PSEGKVYVDGLDTSDEENLWDIRNKAGMVFQNPDNQIVA 100 (280)
T ss_pred cceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEeccccccHHHHhhheEEEecChhhhhcc
Confidence 469999999999999999999999999999999999876 468999999987642 234678999999974 2334
Q ss_pred CcHHHHHHHHhhhcCCCcCcHHHHHHHHHHHHHHcCCCcccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCC
Q 000997 917 LTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPT 996 (1194)
Q Consensus 917 lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEPT 996 (1194)
.|+.|++.|..... .....+..+.++++++.++|.+..+..+ ..||||||||++||++|+.+|++|+|||||
T Consensus 101 ~~v~~~l~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----~~LS~G~~qrv~laral~~~p~llllDEPt 172 (280)
T PRK13633 101 TIVEEDVAFGPENL---GIPPEEIRERVDESLKKVGMYEYRRHAP-----HLLSGGQKQRVAIAGILAMRPECIIFDEPT 172 (280)
T ss_pred ccHHHHHHhhHhhc---CCCHHHHHHHHHHHHHHCCCHhHhhCCc-----ccCCHHHHHHHHHHHHHHcCCCEEEEeCCc
Confidence 69999999875432 1233444567889999999988777653 589999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCeEEEEccCcEEEEeCCCC
Q 000997 997 SGLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLG 1055 (1194)
Q Consensus 997 sgLD~~~~~~i~~~l~~l~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~~ 1055 (1194)
+|||+.++..+.+.|++++++ |+|||+++|+++. + ..+|++++|++ |++++.|+..
T Consensus 173 ~gLD~~~~~~l~~~l~~l~~~~g~tillvtH~~~~-~-~~~d~v~~l~~-G~i~~~g~~~ 229 (280)
T PRK13633 173 AMLDPSGRREVVNTIKELNKKYGITIILITHYMEE-A-VEADRIIVMDS-GKVVMEGTPK 229 (280)
T ss_pred ccCCHHHHHHHHHHHHHHHHhcCCEEEEEecChHH-H-hcCCEEEEEEC-CEEEEecCHH
Confidence 999999999999999999764 9999999999873 4 45999999985 7899988753
No 308
>PRK11248 tauB taurine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.5e-34 Score=321.70 Aligned_cols=201 Identities=26% Similarity=0.376 Sum_probs=167.7
Q ss_pred eeeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCceeeEEEECCccCCCCCCCceEEEEecCCCCCCCCCHH
Q 000997 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVPPRTSAYVSQQDWQVAEMTVR 227 (1194)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lTV~ 227 (1194)
..+|+|+|++|++|++++|+|||||||||||++|+|.++|. +|+|.++|.++.. ....++|++|++.+++.+||+
T Consensus 14 ~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~--~~~~~~~v~q~~~~~~~~tv~ 88 (255)
T PRK11248 14 KPALEDINLTLESGELLVVLGPSGCGKTTLLNLIAGFVPYQ---HGSITLDGKPVEG--PGAERGVVFQNEGLLPWRNVQ 88 (255)
T ss_pred eeeEeeeeEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEECCC--CCCcEEEEeCCCccCCCCcHH
Confidence 35999999999999999999999999999999999998776 9999999988753 234589999999888889999
Q ss_pred HHHHHhhhccCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhccCcchhHHHHHHHHHhCCcccccccccCccCCCC
Q 000997 228 ETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEMLKGI 307 (1194)
Q Consensus 228 E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~k~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~L 307 (1194)
||+.+.....+... .+....++++++.+||.+..++.+ ..|
T Consensus 89 e~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~gl~~~~~~~~-----~~L 129 (255)
T PRK11248 89 DNVAFGLQLAGVEK----------------------------------MQRLEIAHQMLKKVGLEGAEKRYI-----WQL 129 (255)
T ss_pred HHHHhHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCChhHhhCCh-----hhC
Confidence 99987543221000 001124678899999987766654 469
Q ss_pred ChhhhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEc--CCe
Q 000997 308 SGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLS--EGQ 385 (1194)
Q Consensus 308 SGGqkqRvsia~al~~~~~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~--~G~ 385 (1194)
||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|+++++.. +++|+.++|+.+++..++|+|++|+ +|+
T Consensus 130 SgGq~qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~-g~tviivsH~~~~~~~~~d~i~~l~~~~G~ 208 (255)
T PRK11248 130 SGGQRQRVGIARALAANPQLLLLDEPFGALDAFTREQMQTLLLKLWQET-GKQVLLITHDIEEAVFMATELVLLSPGPGR 208 (255)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHhc-CCEEEEEeCCHHHHHHhCCEEEEEeCCCcE
Confidence 9999999999999999999999999999999999999999999985433 4556668889999999999999998 599
Q ss_pred EEEecChh
Q 000997 386 IVYQGPRV 393 (1194)
Q Consensus 386 iv~~G~~~ 393 (1194)
++..++.+
T Consensus 209 i~~~~~~~ 216 (255)
T PRK11248 209 VVERLPLN 216 (255)
T ss_pred EEEEecCC
Confidence 99988643
No 309
>PRK13636 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=9.1e-35 Score=328.39 Aligned_cols=206 Identities=26% Similarity=0.352 Sum_probs=171.1
Q ss_pred eeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCceeeEEEECCccCCCC-----CCCceEEEEecCCC-CCC
Q 000997 149 TILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEF-----VPPRTSAYVSQQDW-QVA 222 (1194)
Q Consensus 149 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~-----~~~~~~~yv~Q~d~-~~~ 222 (1194)
.+|+|+|++|++||+++|+||||||||||+++|+|.+++. +|+|.++|+++... ..++.++|++|++. .+.
T Consensus 20 ~~l~~vs~~i~~Ge~~~i~G~nGaGKSTLl~~i~Gl~~p~---~G~i~i~g~~~~~~~~~~~~~~~~ig~v~q~~~~~~~ 96 (283)
T PRK13636 20 HALKGININIKKGEVTAILGGNGAGKSTLFQNLNGILKPS---SGRILFDGKPIDYSRKGLMKLRESVGMVFQDPDNQLF 96 (283)
T ss_pred eeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---ccEEEECCEECCCCcchHHHHHhhEEEEecCcchhhc
Confidence 5999999999999999999999999999999999999876 99999999887411 12457999999973 345
Q ss_pred CCCHHHHHHHhhhccCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhccCcchhHHHHHHHHHhCCcccccccccCc
Q 000997 223 EMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDE 302 (1194)
Q Consensus 223 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~k~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~ 302 (1194)
..||+||+.+.....+... ......++++++.+||.+..++.+
T Consensus 97 ~~tv~e~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~gL~~~~~~~~--- 139 (283)
T PRK13636 97 SASVYQDVSFGAVNLKLPE----------------------------------DEVRKRVDNALKRTGIEHLKDKPT--- 139 (283)
T ss_pred cccHHHHHHhHHHHcCCCH----------------------------------HHHHHHHHHHHHHCCChhhhhCCc---
Confidence 6899999988543221100 001224778899999988777655
Q ss_pred cCCCCChhhhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEc
Q 000997 303 MLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLS 382 (1194)
Q Consensus 303 ~~~~LSGGqkqRvsia~al~~~~~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~ 382 (1194)
+.||||||||++||+||+.+|++|+|||||+|||+.++..+.+.|+++++.. +++|+.++|..+++..+||++++|+
T Consensus 140 --~~LS~G~~qrl~laraL~~~p~lLilDEPt~gLD~~~~~~l~~~l~~l~~~~-g~tillvsH~~~~~~~~~dri~~l~ 216 (283)
T PRK13636 140 --HCLSFGQKKRVAIAGVLVMEPKVLVLDEPTAGLDPMGVSEIMKLLVEMQKEL-GLTIIIATHDIDIVPLYCDNVFVMK 216 (283)
T ss_pred --ccCCHHHHHHHHHHHHHHcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHhC-CCEEEEEecCHHHHHHhCCEEEEEE
Confidence 4699999999999999999999999999999999999999999999987643 4556668899999999999999999
Q ss_pred CCeEEEecChhhHHH
Q 000997 383 EGQIVYQGPRVSVLD 397 (1194)
Q Consensus 383 ~G~iv~~G~~~~~~~ 397 (1194)
+|++++.|+.+++..
T Consensus 217 ~G~i~~~g~~~~~~~ 231 (283)
T PRK13636 217 EGRVILQGNPKEVFA 231 (283)
T ss_pred CCEEEEeCCHHHHhc
Confidence 999999999888753
No 310
>cd03264 ABC_drug_resistance_like ABC-type multidrug transport system, ATPase component. The biological function of this family is not well characterized, but display ABC domains similar to members of ABCA subfamily. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=4.3e-35 Score=317.57 Aligned_cols=196 Identities=29% Similarity=0.447 Sum_probs=166.1
Q ss_pred eeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCceeeEEEECCccCCCCC--CCceEEEEecCCCCCCCCCH
Q 000997 149 TILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV--PPRTSAYVSQQDWQVAEMTV 226 (1194)
Q Consensus 149 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~~--~~~~~~yv~Q~d~~~~~lTV 226 (1194)
++|+|+|+++++| +++|+|||||||||||++|+|.+++. +|+|.++|.++.... .++.++|++|++.+++.+||
T Consensus 14 ~~l~~vs~~i~~g-~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~i~~~~q~~~~~~~~tv 89 (211)
T cd03264 14 RALDGVSLTLGPG-MYGLLGPNGAGKTTLMRILATLTPPS---SGTIRIDGQDVLKQPQKLRRRIGYLPQEFGVYPNFTV 89 (211)
T ss_pred EEEcceeEEEcCC-cEEEECCCCCCHHHHHHHHhCCCCCC---ccEEEECCCccccchHHHHhheEEecCCCcccccCCH
Confidence 6999999999999 99999999999999999999998876 999999998765432 24679999999999999999
Q ss_pred HHHHHHhhhccCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhccCcchhHHHHHHHHHhCCcccccccccCccCCC
Q 000997 227 RETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEMLKG 306 (1194)
Q Consensus 227 ~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~k~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~ 306 (1194)
+||+.+.....+... .+....++.+++.+||++..++.++ .
T Consensus 90 ~~~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~~-----~ 130 (211)
T cd03264 90 REFLDYIAWLKGIPS----------------------------------KEVKARVDEVLELVNLGDRAKKKIG-----S 130 (211)
T ss_pred HHHHHHHHHHhCCCH----------------------------------HHHHHHHHHHHHHCCCHHHHhCchh-----h
Confidence 999987543321100 0012236778999999887777654 5
Q ss_pred CChhhhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEcCCeE
Q 000997 307 ISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEGQI 386 (1194)
Q Consensus 307 LSGGqkqRvsia~al~~~~~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~~G~i 386 (1194)
|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++++ + ++|+.++|+.+++.+++|++++|++|++
T Consensus 131 LS~G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~--~-~tii~vsH~~~~~~~~~d~i~~l~~g~i 207 (211)
T cd03264 131 LSGGMRRRVGIAQALVGDPSILIVDEPTAGLDPEERIRFRNLLSELGE--D-RIVILSTHIVEDVESLCNQVAVLNKGKL 207 (211)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhC--C-CEEEEEcCCHHHHHHhCCEEEEEECCEE
Confidence 999999999999999999999999999999999999999999999864 3 5667788999999999999999999999
Q ss_pred EEec
Q 000997 387 VYQG 390 (1194)
Q Consensus 387 v~~G 390 (1194)
++.|
T Consensus 208 ~~~g 211 (211)
T cd03264 208 VFEG 211 (211)
T ss_pred EecC
Confidence 8765
No 311
>TIGR03864 PQQ_ABC_ATP ABC transporter, ATP-binding subunit, PQQ-dependent alcohol dehydrogenase system. Members of this protein family are the ATP-binding subunit of an ABC transporter system that is associated with PQQ biosynthesis and PQQ-dependent alcohol dehydrogenases. While this family shows homology to several efflux ABC transporter subunits, the presence of a periplasmic substrate-binding protein and association with systems for catabolism of alcohols suggests a role in import rather than detoxification.
Probab=100.00 E-value=9.2e-35 Score=320.40 Aligned_cols=205 Identities=25% Similarity=0.388 Sum_probs=169.8
Q ss_pred eeeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCceeeEEEECCccCCCCCC--CceEEEEecCCCCCCCCC
Q 000997 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVP--PRTSAYVSQQDWQVAEMT 225 (1194)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~~~--~~~~~yv~Q~d~~~~~lT 225 (1194)
+++|+|+|+.|++|++++|+||||||||||+++|+|.++|. +|+|.++|.++..... .+.++|++|++.+++.+|
T Consensus 14 ~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~---~G~i~~~g~~i~~~~~~~~~~i~~~~q~~~~~~~~t 90 (236)
T TIGR03864 14 RRALDDVSFTVRPGEFVALLGPNGAGKSTLFSLLTRLYVAQ---EGQISVAGHDLRRAPRAALARLGVVFQQPTLDLDLS 90 (236)
T ss_pred EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCC---ceEEEECCEEcccCChhhhhhEEEeCCCCCCcccCc
Confidence 46999999999999999999999999999999999998876 9999999987654321 257999999998888999
Q ss_pred HHHHHHHhhhccCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhccCcchhHHHHHHHHHhCCcccccccccCccCC
Q 000997 226 VRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEMLK 305 (1194)
Q Consensus 226 V~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~k~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~ 305 (1194)
|+||+.+.....+... .+....++.+++.+||++..++.++
T Consensus 91 ~~~~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~gl~~~~~~~~~----- 131 (236)
T TIGR03864 91 VRQNLRYHAALHGLSR----------------------------------AEARERIAALLARLGLAERADDKVR----- 131 (236)
T ss_pred HHHHHHHHHHhcCCCH----------------------------------HHHHHHHHHHHHHcCChhhhcCChh-----
Confidence 9999987543221000 0011236778889999877776654
Q ss_pred CCChhhhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEcCCe
Q 000997 306 GISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEGQ 385 (1194)
Q Consensus 306 ~LSGGqkqRvsia~al~~~~~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~~G~ 385 (1194)
.|||||||||+||+||+.+|++++|||||+|||+.+...+.+.|+++++.. +++++.++|..+++.. +|++++|++|+
T Consensus 132 ~LS~G~~qrl~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~-~~tiii~sH~~~~~~~-~d~i~~l~~G~ 209 (236)
T TIGR03864 132 ELNGGHRRRVEIARALLHRPALLLLDEPTVGLDPASRAAIVAHVRALCRDQ-GLSVLWATHLVDEIEA-DDRLVVLHRGR 209 (236)
T ss_pred hCCHHHHHHHHHHHHHhcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHHhC-CCEEEEEecChhhHhh-CCEEEEEeCCe
Confidence 599999999999999999999999999999999999999999999987533 3456667788888864 99999999999
Q ss_pred EEEecChhhHH
Q 000997 386 IVYQGPRVSVL 396 (1194)
Q Consensus 386 iv~~G~~~~~~ 396 (1194)
+++.|+.+++.
T Consensus 210 i~~~~~~~~~~ 220 (236)
T TIGR03864 210 VLADGAAAELR 220 (236)
T ss_pred EEEeCCHHHHH
Confidence 99999887764
No 312
>PRK14239 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.5e-34 Score=322.18 Aligned_cols=207 Identities=24% Similarity=0.302 Sum_probs=164.8
Q ss_pred ceEEeeeeeEEEeCCcEEEEEccCCCChHHHHhhhcCCCC--C-CeeEEEEEEcCccCCh-----hcccceeeEeecCCC
Q 000997 841 RLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKT--G-GIIEGDIYISGYPKRQ-----ETFARISGYCEQNDI 912 (1194)
Q Consensus 841 ~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~--~-~~~~G~i~i~g~~~~~-----~~~~~~~gyv~Q~~~ 912 (1194)
++.+|+|+|+++++||++||+||||||||||+++|+|... + .+.+|+|.++|.++.. ..+++.++|++|++.
T Consensus 17 ~~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~v~q~~~ 96 (252)
T PRK14239 17 KKKALNSVSLDFYPNEITALIGPSGSGKSTLLRSINRMNDLNPEVTITGSIVYNGHNIYSPRTDTVDLRKEIGMVFQQPN 96 (252)
T ss_pred CeeeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhcccccCCCCCccceEEECCEECcCcccchHhhhhcEEEEecCCc
Confidence 3569999999999999999999999999999999999732 1 1247999999987632 234567999999988
Q ss_pred CCCCCcHHHHHHHHhhhcCCCcCcHHHHHHHHHHHHHHcCCCcccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEE
Q 000997 913 HSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFM 992 (1194)
Q Consensus 913 ~~~~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illL 992 (1194)
+++ .|++||+.+....+. . .......+.++++++.+++.+....... ..+..||+|||||++||+||+.+|+||+|
T Consensus 97 ~~~-~tv~enl~~~~~~~~-~-~~~~~~~~~~~~~l~~~~l~~~~~~~~~-~~~~~LS~G~~qrv~laral~~~p~llll 172 (252)
T PRK14239 97 PFP-MSIYENVVYGLRLKG-I-KDKQVLDEAVEKSLKGASIWDEVKDRLH-DSALGLSGGQQQRVCIARVLATSPKIILL 172 (252)
T ss_pred cCc-CcHHHHHHHHHHHcC-C-CcHHHHHHHHHHHHHHcCCchhHHHHHh-cCcccCCHHHHHHHHHHHHHhcCCCEEEE
Confidence 877 899999988643321 1 1122334557788888887431111111 12358999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCeEEEEccCcEEEEeCCC
Q 000997 993 DEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1194)
Q Consensus 993 DEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~ 1054 (1194)
||||+|||+.++..+.+.|+++.+ ++|||+++|+++ ++.+.+|++++|+ +|++++.|+.
T Consensus 173 DEPt~~LD~~~~~~l~~~l~~~~~-~~tii~~sH~~~-~~~~~~d~i~~l~-~G~i~~~g~~ 231 (252)
T PRK14239 173 DEPTSALDPISAGKIEETLLGLKD-DYTMLLVTRSMQ-QASRISDRTGFFL-DGDLIEYNDT 231 (252)
T ss_pred cCCccccCHHHHHHHHHHHHHHhh-CCeEEEEECCHH-HHHHhCCEEEEEE-CCEEEEeCCH
Confidence 999999999999999999999865 699999999976 5778899999998 4789998875
No 313
>PRK14274 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.1e-34 Score=324.37 Aligned_cols=218 Identities=22% Similarity=0.289 Sum_probs=172.7
Q ss_pred eEeecceeeeecccccccccccccceEEeeeeeEEEeCCcEEEEEccCCCChHHHHhhhcCCCCC--C-eeEEEEEEcCc
Q 000997 817 MAFGNINYFVDVPVELKQEGVLEDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTG--G-IIEGDIYISGY 893 (1194)
Q Consensus 817 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~--~-~~~G~i~i~g~ 893 (1194)
+.++|+++.+ +++.+|+|+|++|++||++||+|+||||||||+++|+|...+ . +.+|+|.++|.
T Consensus 13 l~i~~l~~~~-------------~~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~p~~~~~G~i~~~g~ 79 (259)
T PRK14274 13 YQINGMNLWY-------------GQHHALKNINLSIPENEVTAIIGPSGCGKSTFIKTLNLMIQMVPNVKLTGEMNYNGS 79 (259)
T ss_pred EEEeeEEEEE-------------CCeeeEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhccCCCCCCCceEEEECCE
Confidence 5666666543 235799999999999999999999999999999999997541 1 14799999998
Q ss_pred cCCh-----hcccceeeEeecCCCCCCCCcHHHHHHHHhhhcCCCcCcHHHHHHHHHHHHHHcCCCcccCCcccCCCCCC
Q 000997 894 PKRQ-----ETFARISGYCEQNDIHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGING 968 (1194)
Q Consensus 894 ~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~ 968 (1194)
++.. ...++.+||++|++.+++. |++||+.|....+. .....+..+.++++++.+++.+....... ..+.+
T Consensus 80 ~~~~~~~~~~~~~~~i~~v~q~~~~~~~-tv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~l~-~~~~~ 155 (259)
T PRK14274 80 NILKGKVDLVELRKNIGMVFQKGNPFPQ-SIFDNVAYGPRIHG--TKNKKKLQEIVEKSLKDVALWDEVKDRLH-TQALS 155 (259)
T ss_pred EccccccCHHHHhhceEEEecCCccccc-CHHHHHHhHHHhcC--CCCHHHHHHHHHHHHHHcCCchhhhhhhh-CCccc
Confidence 7632 2345679999999888875 99999988643321 11223334557788888888532111111 12468
Q ss_pred CCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCeEEEEccCcEE
Q 000997 969 LSTEQRKRLTIAVELVANPSIVFMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGEL 1048 (1194)
Q Consensus 969 LSgGqrqrl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~ 1048 (1194)
||||||||++||++|+.+|+||+|||||+|||+.++..+++.|+++.+ ++|||+++|+++ .+.+.+|++++|+ +|++
T Consensus 156 LS~Gq~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~tiiivtH~~~-~~~~~~d~i~~l~-~G~i 232 (259)
T PRK14274 156 LSGGQQQRLCIARALATNPDVLLMDEPTSALDPVSTRKIEELILKLKE-KYTIVIVTHNMQ-QAARVSDQTAFFY-MGEL 232 (259)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhc-CCEEEEEEcCHH-HHHHhCCEEEEEE-CCEE
Confidence 999999999999999999999999999999999999999999999864 799999999986 5677899999998 5899
Q ss_pred EEeCCC
Q 000997 1049 IYAGPL 1054 (1194)
Q Consensus 1049 ~~~g~~ 1054 (1194)
+..|+.
T Consensus 233 ~~~g~~ 238 (259)
T PRK14274 233 VECNDT 238 (259)
T ss_pred EEECCH
Confidence 998875
No 314
>PRK11247 ssuB aliphatic sulfonates transport ATP-binding subunit; Provisional
Probab=100.00 E-value=1.2e-34 Score=321.80 Aligned_cols=194 Identities=23% Similarity=0.296 Sum_probs=165.4
Q ss_pred eeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCceeeEEEECCccCCCCCCCceEEEEecCCCCCCCCCHHH
Q 000997 149 TILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVPPRTSAYVSQQDWQVAEMTVRE 228 (1194)
Q Consensus 149 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lTV~E 228 (1194)
++|+|+|++|++|++++|+|||||||||||++|+|.+++. +|+|.++|.++.. .++.++|++|++.+++.+||+|
T Consensus 26 ~il~~isl~i~~Ge~~~I~G~NGsGKSTLlk~l~Gl~~p~---~G~i~~~g~~~~~--~~~~i~~v~q~~~l~~~~tv~e 100 (257)
T PRK11247 26 TVLNQLDLHIPAGQFVAVVGRSGCGKSTLLRLLAGLETPS---AGELLAGTAPLAE--AREDTRLMFQDARLLPWKKVID 100 (257)
T ss_pred ceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CeEEEECCEEHHH--hhCceEEEecCccCCCCCcHHH
Confidence 5999999999999999999999999999999999998876 9999999976532 2467999999998888899999
Q ss_pred HHHHhhhccCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhccCcchhHHHHHHHHHhCCcccccccccCccCCCCC
Q 000997 229 TLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEMLKGIS 308 (1194)
Q Consensus 229 ~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~k~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~LS 308 (1194)
|+.+... . . ....++.+++.+||.+..+..+ ..||
T Consensus 101 nl~~~~~----~-~-----------------------------------~~~~~~~~l~~~gl~~~~~~~~-----~~LS 135 (257)
T PRK11247 101 NVGLGLK----G-Q-----------------------------------WRDAALQALAAVGLADRANEWP-----AALS 135 (257)
T ss_pred HHHhccc----c-h-----------------------------------HHHHHHHHHHHcCChhHhcCCh-----hhCC
Confidence 9987421 0 0 0112567888999987666554 4699
Q ss_pred hhhhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEcCCeEEE
Q 000997 309 GGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEGQIVY 388 (1194)
Q Consensus 309 GGqkqRvsia~al~~~~~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~~G~iv~ 388 (1194)
|||||||+||+||+.+|++++|||||+|||+.+...+.+.|+++.+.. +.+|+.++|+..++.+++|+|++|++|++++
T Consensus 136 gGqkqrl~laraL~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~-~~tviivsHd~~~~~~~~d~i~~l~~G~i~~ 214 (257)
T PRK11247 136 GGQKQRVALARALIHRPGLLLLDEPLGALDALTRIEMQDLIESLWQQH-GFTVLLVTHDVSEAVAMADRVLLIEEGKIGL 214 (257)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHhCCEEEEEECCEEEe
Confidence 999999999999999999999999999999999999999999886543 3456668888889999999999999999999
Q ss_pred ecChh
Q 000997 389 QGPRV 393 (1194)
Q Consensus 389 ~G~~~ 393 (1194)
.|+.+
T Consensus 215 ~~~~~ 219 (257)
T PRK11247 215 DLTVD 219 (257)
T ss_pred ecccc
Confidence 88753
No 315
>PRK11308 dppF dipeptide transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.9e-34 Score=330.56 Aligned_cols=207 Identities=20% Similarity=0.230 Sum_probs=173.9
Q ss_pred eeeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCceeeEEEECCccCCCCC------CCceEEEEecCC--C
Q 000997 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV------PPRTSAYVSQQD--W 219 (1194)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~~------~~~~~~yv~Q~d--~ 219 (1194)
..+|+|||++|++||+++|+|+||||||||+++|+|.+++. +|+|.++|.++.... .++.++||+|++ .
T Consensus 28 ~~~l~~vsl~i~~Ge~~~IvG~sGsGKSTLl~~l~gl~~p~---~G~i~~~g~~l~~~~~~~~~~~r~~i~~v~Q~~~~~ 104 (327)
T PRK11308 28 VKALDGVSFTLERGKTLAVVGESGCGKSTLARLLTMIETPT---GGELYYQGQDLLKADPEAQKLLRQKIQIVFQNPYGS 104 (327)
T ss_pred eeEEeeeEEEECCCCEEEEECCCCCcHHHHHHHHHcCCCCC---CcEEEECCEEcCcCCHHHHHHHhCCEEEEEcCchhh
Confidence 56999999999999999999999999999999999998775 899999999876542 245799999997 5
Q ss_pred CCCCCCHHHHHHHhhhccCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhccCcchhHHHHHHHHHhCCcc-ccccc
Q 000997 220 QVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDT-CADTL 298 (1194)
Q Consensus 220 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~k~~~~~~~~~~~~~~~~l~~lgL~~-~~dt~ 298 (1194)
+.+.+||.+++.+..+...... ..+...++.++++.+||+. ..++.
T Consensus 105 l~p~~~v~~~l~~~~~~~~~~~---------------------------------~~~~~~~~~~~l~~~gL~~~~~~~~ 151 (327)
T PRK11308 105 LNPRKKVGQILEEPLLINTSLS---------------------------------AAERREKALAMMAKVGLRPEHYDRY 151 (327)
T ss_pred cCCccCHHHHHHHHHHHccCCC---------------------------------HHHHHHHHHHHHHHCCCChHHhcCC
Confidence 7888999999977543321000 0011234788899999963 55554
Q ss_pred ccCccCCCCChhhhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeE
Q 000997 299 VGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDV 378 (1194)
Q Consensus 299 vg~~~~~~LSGGqkqRvsia~al~~~~~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~v 378 (1194)
...|||||||||+||+||+.+|++|++||||+|||..++.+|++.|+++.+.. +++++.++|+...+.+++|+|
T Consensus 152 -----p~~LSgGq~QRv~iArAL~~~P~lLilDEPts~LD~~~~~~i~~lL~~l~~~~-g~til~iTHdl~~~~~~adrv 225 (327)
T PRK11308 152 -----PHMFSGGQRQRIAIARALMLDPDVVVADEPVSALDVSVQAQVLNLMMDLQQEL-GLSYVFISHDLSVVEHIADEV 225 (327)
T ss_pred -----CccCCHHHHHHHHHHHHHHcCCCEEEEECCCccCCHHHHHHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHhCCEE
Confidence 45699999999999999999999999999999999999999999999987643 456777899999999999999
Q ss_pred EEEcCCeEEEecChhhHH
Q 000997 379 ILLSEGQIVYQGPRVSVL 396 (1194)
Q Consensus 379 ilL~~G~iv~~G~~~~~~ 396 (1194)
++|++|++++.|+.+++.
T Consensus 226 ~vm~~G~ive~g~~~~~~ 243 (327)
T PRK11308 226 MVMYLGRCVEKGTKEQIF 243 (327)
T ss_pred EEEECCEEEEECCHHHHh
Confidence 999999999999998874
No 316
>PRK10771 thiQ thiamine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=8.7e-35 Score=319.75 Aligned_cols=196 Identities=24% Similarity=0.313 Sum_probs=166.1
Q ss_pred eeeEEEeCCcEEEEEccCCCChHHHHhhhcCCCCCCeeEEEEEEcCccCChh-cccceeeEeecCCCCCCCCcHHHHHHH
Q 000997 847 NVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQE-TFARISGYCEQNDIHSPGLTVLESLLF 925 (1194)
Q Consensus 847 ~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~-~~~~~~gyv~Q~~~~~~~lTv~e~l~f 925 (1194)
||||++++||++||+||||||||||+++|+|... +.+|+|.++|.++... ..++.++|++|++.+++.+|+.||+.+
T Consensus 17 ~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~ 94 (232)
T PRK10771 17 RFDLTVERGERVAILGPSGAGKSTLLNLIAGFLT--PASGSLTLNGQDHTTTPPSRRPVSMLFQENNLFSHLTVAQNIGL 94 (232)
T ss_pred eeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCeecCcCChhhccEEEEecccccccCCcHHHHHhc
Confidence 8999999999999999999999999999999876 4689999999875431 124579999999999999999999987
Q ss_pred HhhhcCCCcCcHHHHHHHHHHHHHHcCCCcccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHH
Q 000997 926 SAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSGLDARAAA 1005 (1194)
Q Consensus 926 ~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEPTsgLD~~~~~ 1005 (1194)
...... .. .....+.++++++.+++.+..+..+ ..||||||||++||++|+.+|++|+|||||+|||+.++.
T Consensus 95 ~~~~~~--~~-~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrv~laral~~~p~lllLDEP~~gLD~~~~~ 166 (232)
T PRK10771 95 GLNPGL--KL-NAAQREKLHAIARQMGIEDLLARLP-----GQLSGGQRQRVALARCLVREQPILLLDEPFSALDPALRQ 166 (232)
T ss_pred cccccc--CC-CHHHHHHHHHHHHHcCcHHHHhCCc-----ccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHH
Confidence 532111 11 1233456888999999987777654 579999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCeEEEEccCcEEEEeCCC
Q 000997 1006 IVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1194)
Q Consensus 1006 ~i~~~l~~l~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~ 1054 (1194)
.+.+.|++++++ |+|||+++|++. ++.+.+|++++|. +|++++.|+.
T Consensus 167 ~~~~~l~~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~-~g~i~~~g~~ 214 (232)
T PRK10771 167 EMLTLVSQVCQERQLTLLMVSHSLE-DAARIAPRSLVVA-DGRIAWDGPT 214 (232)
T ss_pred HHHHHHHHHHHhcCCEEEEEECCHH-HHHHhCCEEEEEE-CCEEEEeCCH
Confidence 999999998764 899999999986 4667899999998 4799998875
No 317
>PRK14270 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.1e-34 Score=322.89 Aligned_cols=206 Identities=23% Similarity=0.284 Sum_probs=166.8
Q ss_pred ceEEeeeeeEEEeCCcEEEEEccCCCChHHHHhhhcCCCCCC---eeEEEEEEcCccCCh-----hcccceeeEeecCCC
Q 000997 841 RLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGG---IIEGDIYISGYPKRQ-----ETFARISGYCEQNDI 912 (1194)
Q Consensus 841 ~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~---~~~G~i~i~g~~~~~-----~~~~~~~gyv~Q~~~ 912 (1194)
++.+|+|+|+++++||+++|+|+||||||||+++|+|..++. +.+|+|.++|.++.. ...++.+||++|++.
T Consensus 16 ~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~i~~~~q~~~ 95 (251)
T PRK14270 16 EKQALNDINLPIYENKITALIGPSGCGKSTFLRCLNRMNDLISNVKIEGEVLLDGKNIYDKDVDVVELRKRVGMVFQKPN 95 (251)
T ss_pred CeeeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHHhccCcccCCCCccEEEECCEecccccccHHHHHhheEEEecCCC
Confidence 457999999999999999999999999999999999975421 257999999987632 234567999999998
Q ss_pred CCCCCcHHHHHHHHhhhcCCCcCcHHHHHHHHHHHHHHcCCCc-ccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCEEE
Q 000997 913 HSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTS-LSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVF 991 (1194)
Q Consensus 913 ~~~~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~-~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~ill 991 (1194)
+++ .|++||+.|....... .......+.++++++.+++.+ +.+. .. ..+..||+|||||++||++|+.+|+||+
T Consensus 96 ~~~-~tv~enl~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~~~~~-~~-~~~~~LS~G~~qrv~laral~~~p~lll 170 (251)
T PRK14270 96 PFP-MSIYDNVAYGPRIHGI--KDKKELDKIVEWALKKAALWDEVKDD-LK-KSALKLSGGQQQRLCIARTIAVKPDVIL 170 (251)
T ss_pred cCC-CcHHHHHHhHHHhcCC--CcHHHHHHHHHHHHHHcCCchhhhhH-hh-CCcccCCHHHHHHHHHHHHHhcCCCEEE
Confidence 887 8999999886543211 122333456778889888742 1111 11 1246899999999999999999999999
Q ss_pred EeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCeEEEEccCcEEEEeCCC
Q 000997 992 MDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1194)
Q Consensus 992 LDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~ 1054 (1194)
|||||+|||+.++..+.+.|+++.+ +.|||++||+++ ++.+.+|++++|. +|++++.|+.
T Consensus 171 lDEP~~~LD~~~~~~l~~~L~~~~~-~~tiiivsH~~~-~~~~~~d~v~~l~-~G~i~~~~~~ 230 (251)
T PRK14270 171 MDEPTSALDPISTLKIEDLMVELKK-EYTIVIVTHNMQ-QASRVSDYTAFFL-MGDLIEFNKT 230 (251)
T ss_pred EeCCcccCCHHHHHHHHHHHHHHHh-CCeEEEEEcCHH-HHHHhcCEEEEEE-CCeEEEeCCH
Confidence 9999999999999999999999876 689999999986 5677899999998 5789998875
No 318
>PRK14240 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.7e-34 Score=321.32 Aligned_cols=206 Identities=24% Similarity=0.320 Sum_probs=165.2
Q ss_pred eEEeeeeeEEEeCCcEEEEEccCCCChHHHHhhhcCCCCCC---eeEEEEEEcCccCCh-----hcccceeeEeecCCCC
Q 000997 842 LQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGG---IIEGDIYISGYPKRQ-----ETFARISGYCEQNDIH 913 (1194)
Q Consensus 842 ~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~---~~~G~i~i~g~~~~~-----~~~~~~~gyv~Q~~~~ 913 (1194)
+.+|+|+||++++||++||+||||||||||+++|+|..... +.+|+|.++|.++.. ...++.++|++|++.+
T Consensus 16 ~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~ 95 (250)
T PRK14240 16 FQALKKINLDIEENQVTALIGPSGCGKSTFLRTLNRMNDLIPSVKIEGEVLLDGQDIYKSDIDVNQLRKRVGMVFQQPNP 95 (250)
T ss_pred ceeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEccccccchHHHhccEEEEecCCcc
Confidence 46999999999999999999999999999999999964311 258999999987642 2345679999999888
Q ss_pred CCCCcHHHHHHHHhhhcCCCcCcHHHHHHHHHHHHHHcCCCcccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEe
Q 000997 914 SPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMD 993 (1194)
Q Consensus 914 ~~~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illLD 993 (1194)
++ .|++||+.+....+.. ......++.++++++.+++.+....... ..+..||||||||++|||+|+.+|++|+||
T Consensus 96 ~~-~t~~~ni~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~l~~~~~-~~~~~LS~G~~qrv~laral~~~p~llllD 171 (250)
T PRK14240 96 FP-MSIYDNVAYGPRTHGI--KDKKKLDEIVEKSLKGAALWDEVKDRLK-KSALGLSGGQQQRLCIARALAVEPEVLLMD 171 (250)
T ss_pred Cc-ccHHHHHHHHHHhcCC--CCHHHHHHHHHHHHHHcCCchhhHHHHh-cCCCCCCHHHHHHHHHHHHHhcCCCEEEEe
Confidence 87 8999999986543211 1223344567788888877421111111 124689999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCeEEEEccCcEEEEeCCC
Q 000997 994 EPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1194)
Q Consensus 994 EPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~ 1054 (1194)
|||+|||+.++..+.+.|+++. +++|||++||+++ .+.+.+|++++|++ |+++..|+.
T Consensus 172 EP~~~LD~~~~~~l~~~l~~~~-~~~tiii~sH~~~-~~~~~~d~v~~l~~-G~i~~~~~~ 229 (250)
T PRK14240 172 EPTSALDPISTLKIEELIQELK-KDYTIVIVTHNMQ-QASRISDKTAFFLN-GEIVEFGDT 229 (250)
T ss_pred CCCccCCHHHHHHHHHHHHHHh-cCCeEEEEEeCHH-HHHhhCCEEEEEEC-CEEEEeCCH
Confidence 9999999999999999999985 4899999999976 46778999999985 789888864
No 319
>PRK13632 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.2e-34 Score=325.79 Aligned_cols=205 Identities=26% Similarity=0.358 Sum_probs=168.7
Q ss_pred eeeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCceeeEEEECCccCCCCC---CCceEEEEecCCC-CCCC
Q 000997 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV---PPRTSAYVSQQDW-QVAE 223 (1194)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~~---~~~~~~yv~Q~d~-~~~~ 223 (1194)
+++|+|+|+++++|++++|+|||||||||||++|+|.+++. +|+|.++|.++.... .++.++|++|++. .++.
T Consensus 22 ~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~---~G~I~~~g~~i~~~~~~~~~~~i~~v~q~~~~~~~~ 98 (271)
T PRK13632 22 NNALKNVSFEINEGEYVAILGHNGSGKSTISKILTGLLKPQ---SGEIKIDGITISKENLKEIRKKIGIIFQNPDNQFIG 98 (271)
T ss_pred ccceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CceEEECCEecCcCCHHHHhcceEEEEeCHHHhcCc
Confidence 35899999999999999999999999999999999999876 999999999875432 2467999999974 5778
Q ss_pred CCHHHHHHHhhhccCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhccCcchhHHHHHHHHHhCCcccccccccCcc
Q 000997 224 MTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEM 303 (1194)
Q Consensus 224 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~k~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~ 303 (1194)
+||+||+.+.....+... .+....++++++.+||.+..++.+
T Consensus 99 ~tv~enl~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~---- 140 (271)
T PRK13632 99 ATVEDDIAFGLENKKVPP----------------------------------KKMKDIIDDLAKKVGMEDYLDKEP---- 140 (271)
T ss_pred ccHHHHHHhHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCCHHHhhCCc----
Confidence 999999987543211000 001224678899999988777665
Q ss_pred CCCCChhhhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEcC
Q 000997 304 LKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSE 383 (1194)
Q Consensus 304 ~~~LSGGqkqRvsia~al~~~~~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~~ 383 (1194)
+.||||||||++||+||+.+|++|+|||||+|||+.++..+++.|+++++. ++++|+.++|..+++. .+|++++|++
T Consensus 141 -~~LS~G~~qrl~laral~~~p~lllLDEP~~gLD~~~~~~l~~~l~~~~~~-~~~tiii~sH~~~~~~-~~d~v~~l~~ 217 (271)
T PRK13632 141 -QNLSGGQKQRVAIASVLALNPEIIIFDESTSMLDPKGKREIKKIMVDLRKT-RKKTLISITHDMDEAI-LADKVIVFSE 217 (271)
T ss_pred -ccCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHh-cCcEEEEEEechhHHh-hCCEEEEEEC
Confidence 469999999999999999999999999999999999999999999998753 3345555667777774 7999999999
Q ss_pred CeEEEecChhhHH
Q 000997 384 GQIVYQGPRVSVL 396 (1194)
Q Consensus 384 G~iv~~G~~~~~~ 396 (1194)
|++++.|+.+++.
T Consensus 218 G~i~~~g~~~~~~ 230 (271)
T PRK13632 218 GKLIAQGKPKEIL 230 (271)
T ss_pred CEEEEecCHHHHh
Confidence 9999999887753
No 320
>PRK14244 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.1e-34 Score=322.71 Aligned_cols=208 Identities=21% Similarity=0.292 Sum_probs=166.8
Q ss_pred ceEEeeeeeEEEeCCcEEEEEccCCCChHHHHhhhcCCCCC--C-eeEEEEEEcCccCCh-----hcccceeeEeecCCC
Q 000997 841 RLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTG--G-IIEGDIYISGYPKRQ-----ETFARISGYCEQNDI 912 (1194)
Q Consensus 841 ~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~--~-~~~G~i~i~g~~~~~-----~~~~~~~gyv~Q~~~ 912 (1194)
.+.+|+|+||++++||+++|+|+||||||||+++|+|.... . +.+|+|.++|.++.. ..+++.++|++|++.
T Consensus 17 ~~~~l~~is~~i~~Ge~~~I~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~i~~v~q~~~ 96 (251)
T PRK14244 17 SKQILFDINLDIYKREVTAFIGPSGCGKSTFLRCFNRMNDFVPNCKVKGELDIDGIDVYSVDTNVVLLRAKVGMVFQKPN 96 (251)
T ss_pred CeeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccCCCCCcceEEEECCEehHhcccchHHHhhhEEEEecCcc
Confidence 45799999999999999999999999999999999997541 1 358999999987532 134567999999988
Q ss_pred CCCCCcHHHHHHHHhhhcCCCcCcHHHHHHHHHHHHHHcCCCcccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEE
Q 000997 913 HSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFM 992 (1194)
Q Consensus 913 ~~~~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illL 992 (1194)
+++. |++||+.+....+.. .......++.++++++.+++.+........ .+..||||||||++|||+|+.+|+||+|
T Consensus 97 ~~~~-tv~~ni~~~~~~~~~-~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~-~~~~LS~Gq~qrv~laral~~~p~llll 173 (251)
T PRK14244 97 PFPK-SIYDNVAYGPKLHGL-AKNKKKLDEIVEKSLTSVGLWEELGDRLKD-SAFELSGGQQQRLCIARAIAVKPTMLLM 173 (251)
T ss_pred cccC-CHHHHHHHHHHhcCC-CCCHHHHHHHHHHHHHHcCCCchhhhHhhc-ChhhCCHHHHHHHHHHHHHhcCCCEEEE
Confidence 8875 999999886433211 112223345678889999986521111111 2358999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCeEEEEccCcEEEEeCCC
Q 000997 993 DEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1194)
Q Consensus 993 DEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~ 1054 (1194)
||||+|||+.++..+.+.|+++. +|+|||+++|+++ .+.+.+|++++|++ |++++.|+.
T Consensus 174 DEPt~~LD~~~~~~l~~~l~~~~-~~~tiiiisH~~~-~~~~~~d~i~~l~~-G~i~~~~~~ 232 (251)
T PRK14244 174 DEPCSALDPVATNVIENLIQELK-KNFTIIVVTHSMK-QAKKVSDRVAFFQS-GRIVEYNTT 232 (251)
T ss_pred eCCCccCCHHHHHHHHHHHHHHh-cCCeEEEEeCCHH-HHHhhcCEEEEEEC-CEEEEeCCH
Confidence 99999999999999999999985 4899999999986 46678999999985 789988874
No 321
>TIGR02770 nickel_nikD nickel import ATP-binding protein NikD. This family represents the NikD subunit of a multisubunit nickel import ABC transporter complex. Nickel, once imported, may be used in urease and in certain classes of hydrogenase and superoxide dismutase. NikD and NikE are homologous.
Probab=100.00 E-value=8.5e-35 Score=319.30 Aligned_cols=201 Identities=25% Similarity=0.324 Sum_probs=165.4
Q ss_pred EeeeeeEEEeCCcEEEEEccCCCChHHHHhhhcCCCCCC--eeEEEEEEcCccCChhcc-cceeeEeecCCC--CCCCCc
Q 000997 844 LLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGG--IIEGDIYISGYPKRQETF-ARISGYCEQNDI--HSPGLT 918 (1194)
Q Consensus 844 iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~--~~~G~i~i~g~~~~~~~~-~~~~gyv~Q~~~--~~~~lT 918 (1194)
+|+|||+++++|++++|+||||||||||+++|+|..++. +.+|+|.++|.++..... ++.++|++|++. +.+.+|
T Consensus 1 ~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~~~~~G~i~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~~~t 80 (230)
T TIGR02770 1 LVQDLNLSLKRGEVLALVGESGSGKSLTCLAILGLLPPGLTQTSGEILLDGRPLLPLSIRGRHIATIMQNPRTAFNPLFT 80 (230)
T ss_pred CccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCccCccccEEEECCEechhhhhhhheeEEEecCchhhcCcccC
Confidence 478999999999999999999999999999999987620 158999999987654322 357999999974 557789
Q ss_pred HHHHHHHHhhhcCCCcCcHHHHHHHHHHHHHHcCCCc---ccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCC
Q 000997 919 VLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTS---LSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEP 995 (1194)
Q Consensus 919 v~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~---~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEP 995 (1194)
+.|++.+....... .....++.++++++.+++.+ ..+.. +..|||||||||+|||+|+.+|+||+||||
T Consensus 81 ~~~~~~~~~~~~~~---~~~~~~~~~~~~l~~~~l~~~~~~~~~~-----~~~LS~G~~qrv~laral~~~p~vllLDEP 152 (230)
T TIGR02770 81 MGNHAIETLRSLGK---LSKQARALILEALEAVGLPDPEEVLKKY-----PFQLSGGMLQRVMIALALLLEPPFLIADEP 152 (230)
T ss_pred HHHHHHHHHHHcCc---cHHHHHHHHHHHHHHcCCCchHHHHhCC-----hhhcCHHHHHHHHHHHHHhcCCCEEEEcCC
Confidence 99999876432211 12333456889999999973 33433 357999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCeEEEEccCcEEEEeCCC
Q 000997 996 TSGLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1194)
Q Consensus 996 TsgLD~~~~~~i~~~l~~l~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~ 1054 (1194)
|+|||+.+...+.+.|++++++ |+|||+++|+++ ++...+|++++|+ +|+++..|+.
T Consensus 153 t~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~-~G~i~~~~~~ 210 (230)
T TIGR02770 153 TTDLDVVNQARVLKLLRELRQLFGTGILLITHDLG-VVARIADEVAVMD-DGRIVERGTV 210 (230)
T ss_pred ccccCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEE-CCEEEEeCCH
Confidence 9999999999999999999764 899999999986 5667899999998 5899988874
No 322
>PRK14257 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.8e-34 Score=330.80 Aligned_cols=221 Identities=23% Similarity=0.302 Sum_probs=174.7
Q ss_pred eeEeecceeeeecccccccccccccceEEeeeeeEEEeCCcEEEEEccCCCChHHHHhhhcCCCCC---CeeEEEEEEcC
Q 000997 816 SMAFGNINYFVDVPVELKQEGVLEDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTG---GIIEGDIYISG 892 (1194)
Q Consensus 816 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~---~~~~G~i~i~g 892 (1194)
.+.++|+++.+. .+.+.+|+||||+|++||++||+||||||||||+++|+|.... .+.+|+|.++|
T Consensus 80 ~i~~~nls~~y~-----------~~~~~~L~~is~~I~~Ge~v~IvG~~GsGKSTLl~~L~g~~~~~~~~p~~G~I~idG 148 (329)
T PRK14257 80 VFEIRNFNFWYM-----------NRTKHVLHDLNLDIKRNKVTAFIGPSGCGKSTFLRNLNQLNDLIEGTSHEGEIYFLG 148 (329)
T ss_pred eEEEEeeEEEec-----------CCCceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECC
Confidence 456777766542 1234699999999999999999999999999999999997531 24589999999
Q ss_pred ccCCh-----hcccceeeEeecCCCCCCCCcHHHHHHHHhhhcCCCcCc-HHHHHHHHHHHHHHcCCCcccCCcccCCCC
Q 000997 893 YPKRQ-----ETFARISGYCEQNDIHSPGLTVLESLLFSAWLRLPSEIE-LETQRAFVEEVMELVELTSLSGALIGLPGI 966 (1194)
Q Consensus 893 ~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~e~l~f~~~lr~~~~~~-~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~ 966 (1194)
.++.. ...++.++||+|++.+++ .|++||+.|+.... ... .+...+.++++++.++|.+-.+..++. .+
T Consensus 149 ~~i~~~~~~~~~lr~~i~~v~q~~~~~~-~ti~eNi~~~~~~~---~~~~~~~~~~~~~~~l~~~~L~~~l~~~~~~-~~ 223 (329)
T PRK14257 149 TNTRSKKISSLELRTRIGMVFQKPTPFE-MSIFDNVAYGPRNN---GINDRKILEKIVEKSLKSAALWDEVKDDLDK-AG 223 (329)
T ss_pred EEccccccchHhhhccEEEEecCCccCC-CcHHHHHHhHHHhc---CCChHHHHHHHHHHHHHHcCCcchhhhhhhC-Cc
Confidence 98742 245678999999998875 79999999864322 111 222234467788888875322222332 24
Q ss_pred CCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCeEEEEccCc
Q 000997 967 NGLSTEQRKRLTIAVELVANPSIVFMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGG 1046 (1194)
Q Consensus 967 ~~LSgGqrqrl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gG 1046 (1194)
.+||||||||++|||||+.+|+||+|||||+|||+.+...+.+.|+++++ ++|||++||+++ .+.+.+|++++|+ +|
T Consensus 224 ~~LSgGqkqRl~LARAl~~~p~IlLLDEPts~LD~~~~~~i~~~i~~l~~-~~Tii~iTH~l~-~i~~~~Driivl~-~G 300 (329)
T PRK14257 224 NALSGGQQQRLCIARAIALEPEVLLMDEPTSALDPIATAKIEELILELKK-KYSIIIVTHSMA-QAQRISDETVFFY-QG 300 (329)
T ss_pred ccCCHHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhc-CCEEEEEeCCHH-HHHHhCCEEEEEE-CC
Confidence 68999999999999999999999999999999999999999999999875 799999999976 4666799999998 58
Q ss_pred EEEEeCCCC
Q 000997 1047 ELIYAGPLG 1055 (1194)
Q Consensus 1047 ~~~~~g~~~ 1055 (1194)
+++..|++.
T Consensus 301 ~i~e~g~~~ 309 (329)
T PRK14257 301 WIEEAGETK 309 (329)
T ss_pred EEEEeCCHH
Confidence 999998763
No 323
>COG0444 DppD ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.4e-34 Score=315.63 Aligned_cols=210 Identities=22% Similarity=0.348 Sum_probs=172.6
Q ss_pred ceEEeeeeeEEEeCCcEEEEEccCCCChHHHHhhhcCCCC---CCeeEEEEEEcCccC---Chhc----ccceeeEeecC
Q 000997 841 RLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKT---GGIIEGDIYISGYPK---RQET----FARISGYCEQN 910 (1194)
Q Consensus 841 ~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~---~~~~~G~i~i~g~~~---~~~~----~~~~~gyv~Q~ 910 (1194)
..++++||||++++||++||+|.|||||||+.++|.|..+ ....+|+|.++|.++ +.+. +.+.++|++|+
T Consensus 17 ~v~av~~vs~~i~~GE~lgiVGESGsGKS~~~~aim~llp~~~~~i~~G~i~f~g~~l~~l~~~~~~~iRG~~I~mIfQ~ 96 (316)
T COG0444 17 VVKAVDGVSFELKKGEILGIVGESGSGKSVLAKAIMGLLPKPNARIVGGEILFDGKDLLSLSEKELRKIRGKEIAMIFQD 96 (316)
T ss_pred cEEEEeceeEEEcCCcEEEEEcCCCCCHHHHHHHHHhccCCCCCeEeeeEEEECCcccccCCHHHHHhhcCceEEEEEcC
Confidence 4689999999999999999999999999999999999765 235678999999864 2221 34579999999
Q ss_pred CC--CCCCCcHHHHHHHHhhhcCCCcCcHHHHHHHHHHHHHHcCCCcccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCC
Q 000997 911 DI--HSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPS 988 (1194)
Q Consensus 911 ~~--~~~~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~ 988 (1194)
+. +.|.+|+.+.+.-....+.... ..++..+++.++++.+++.+-...+-.. +.+|||||||||.||.||+.+|+
T Consensus 97 p~~sLnPv~~Ig~Qi~E~l~~h~~~~-~~~ea~~~a~~~L~~Vgi~~~~~~~~~Y--PhelSGGMrQRV~IAmala~~P~ 173 (316)
T COG0444 97 PMTSLNPVMTIGDQIAEVLRLHGKGL-SKKEAKERAIELLELVGIPDPERRLKSY--PHELSGGMRQRVMIAMALALNPK 173 (316)
T ss_pred chhhcCChhhHHHHHHHHHHHhhcch-hhHHHHHHHHHHHHHcCCCCHHHHHhhC--CcccCCcHHHHHHHHHHHhCCCC
Confidence 65 6788999888765544322110 3445566788888888887643322222 36899999999999999999999
Q ss_pred EEEEeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCCcHHHHHhcCeEEEEccCcEEEEeCCCC
Q 000997 989 IVFMDEPTSGLDARAAAIVMRTVRNIVN-TGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLG 1055 (1194)
Q Consensus 989 illLDEPTsgLD~~~~~~i~~~l~~l~~-~g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~~ 1055 (1194)
+||.||||++||...+++|+++|+++.+ .|.|+|+||||+. -+.+.||||+||. .|+++..|+..
T Consensus 174 LlIADEPTTALDvt~QaqIl~Ll~~l~~e~~~aiilITHDl~-vva~~aDri~VMY-aG~iVE~g~~~ 239 (316)
T COG0444 174 LLIADEPTTALDVTVQAQILDLLKELQREKGTALILITHDLG-VVAEIADRVAVMY-AGRIVEEGPVE 239 (316)
T ss_pred EEEeCCCcchhhHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhcceEEEEE-CcEEEEeCCHH
Confidence 9999999999999999999999999986 5999999999987 4889999999998 58999999863
No 324
>cd03267 ABC_NatA_like Similar in sequence to NatA, this is the ATPase component of a bacterial ABC-type Na+ transport system called NatAB, which catalyzes ATP-dependent electrogenic Na+ extrusion without mechanically coupled to proton or K+ uptake. NatB possess six putative membrane spanning regions at its C-terminus. In B. subtilis, NatAB is inducible by agents such as ethanol and protonophores, which lower the protonmotive force across the membrane. The closest sequence similarity to NatA is exhibited by DrrA of the two-component daunomycin- and doxorubicin-efflux system. Hence, the functional NatAB is presumably assembled with two copies of the single ATP-binding protein and the single intergral membrane protein.
Probab=100.00 E-value=1.4e-34 Score=318.63 Aligned_cols=202 Identities=25% Similarity=0.315 Sum_probs=167.0
Q ss_pred cceeeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCceeeEEEECCccCCCC--CCCceEEEEe-cCCCCCC
Q 000997 146 SKLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEF--VPPRTSAYVS-QQDWQVA 222 (1194)
Q Consensus 146 ~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~--~~~~~~~yv~-Q~d~~~~ 222 (1194)
..+++|+|+|+.|++|++++|+|||||||||||++|+|.++|. +|+|.++|.+.... ..++.++|++ |++.+++
T Consensus 32 ~~~~il~~vs~~i~~Ge~~~i~G~NGsGKSTLl~~i~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~ 108 (236)
T cd03267 32 REVEALKGISFTIEKGEIVGFIGPNGAGKTTTLKILSGLLQPT---SGEVRVAGLVPWKRRKKFLRRIGVVFGQKTQLWW 108 (236)
T ss_pred CCeeeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCC---ceEEEECCEEccccchhhcccEEEEcCCccccCC
Confidence 3457999999999999999999999999999999999998876 99999999865332 2245799997 5566778
Q ss_pred CCCHHHHHHHhhhccCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhccCcchhHHHHHHHHHhCCcccccccccCc
Q 000997 223 EMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDE 302 (1194)
Q Consensus 223 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~k~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~ 302 (1194)
.+||+||+.+.....+... ++....++.+++.+||++..|+.++
T Consensus 109 ~~tv~e~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~gl~~~~~~~~~-- 152 (236)
T cd03267 109 DLPVIDSFYLLAAIYDLPP----------------------------------ARFKKRLDELSELLDLEELLDTPVR-- 152 (236)
T ss_pred CCcHHHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCChhHhcCChh--
Confidence 8999999987543321100 0011236678889999988887764
Q ss_pred cCCCCChhhhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEc
Q 000997 303 MLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLS 382 (1194)
Q Consensus 303 ~~~~LSGGqkqRvsia~al~~~~~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~ 382 (1194)
.||||||||++||+||+.+|++++|||||+|||+.++..+.+.|+++++.. +++|+.++|..+++.+++|++++|.
T Consensus 153 ---~LS~G~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~-~~tiiivsH~~~~~~~~~d~i~~l~ 228 (236)
T cd03267 153 ---QLSLGQRMRAEIAAALLHEPEILFLDEPTIGLDVVAQENIRNFLKEYNRER-GTTVLLTSHYMKDIEALARRVLVID 228 (236)
T ss_pred ---hCCHHHHHHHHHHHHHhcCCCEEEEcCCCCCCCHHHHHHHHHHHHHHHhcC-CCEEEEEecCHHHHHHhCCEEEEEe
Confidence 599999999999999999999999999999999999999999999987543 4456667888889999999999999
Q ss_pred CCeEEEec
Q 000997 383 EGQIVYQG 390 (1194)
Q Consensus 383 ~G~iv~~G 390 (1194)
+|++++.|
T Consensus 229 ~G~i~~~g 236 (236)
T cd03267 229 KGRLLYDG 236 (236)
T ss_pred CCEEEecC
Confidence 99998765
No 325
>PRK10762 D-ribose transporter ATP binding protein; Provisional
Probab=100.00 E-value=7.9e-35 Score=355.50 Aligned_cols=209 Identities=26% Similarity=0.360 Sum_probs=175.2
Q ss_pred cceEEeeeeeEEEeCCcEEEEEccCCCChHHHHhhhcCCCCCCeeEEEEEEcCccCCh----hcccceeeEeecCCCCCC
Q 000997 840 DRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ----ETFARISGYCEQNDIHSP 915 (1194)
Q Consensus 840 ~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~----~~~~~~~gyv~Q~~~~~~ 915 (1194)
+++.+|+|+||++.+||++||+|||||||||||++|+|..+ +.+|+|.++|.++.. ...++.+||++|++.+++
T Consensus 15 ~~~~~l~~is~~i~~Ge~~~l~G~NGsGKSTLl~~l~G~~~--p~~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~ 92 (501)
T PRK10762 15 PGVKALSGAALNVYPGRVMALVGENGAGKSTMMKVLTGIYT--RDAGSILYLGKEVTFNGPKSSQEAGIGIIHQELNLIP 92 (501)
T ss_pred CCeEEeeeeeEEEcCCeEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEECCCCCHHHHHhCCEEEEEcchhccC
Confidence 34679999999999999999999999999999999999876 458999999987532 112456999999998899
Q ss_pred CCcHHHHHHHHhhhcCC-CcCcHHHHHHHHHHHHHHcCCCcccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeC
Q 000997 916 GLTVLESLLFSAWLRLP-SEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDE 994 (1194)
Q Consensus 916 ~lTv~e~l~f~~~lr~~-~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illLDE 994 (1194)
.+||+|++.|+...+.. ......+.++.++++++.+++.+..+..+ ..|||||||||+||+||+.+|++|||||
T Consensus 93 ~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSgG~~qrv~la~al~~~p~lllLDE 167 (501)
T PRK10762 93 QLTIAENIFLGREFVNRFGRIDWKKMYAEADKLLARLNLRFSSDKLV-----GELSIGEQQMVEIAKVLSFESKVIIMDE 167 (501)
T ss_pred CCcHHHHhhhccccccccCccCHHHHHHHHHHHHHHcCCCCCccCch-----hhCCHHHHHHHHHHHHHhcCCCEEEEeC
Confidence 99999999886432210 11122334456789999999987776653 5799999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCeEEEEccCcEEEEeCCCCCc
Q 000997 995 PTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLGSK 1057 (1194)
Q Consensus 995 PTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~~~~ 1057 (1194)
||+|||+.++..+++.|+++++.|.|||++|||++ ++...||++++|.+ |+++..|+..+.
T Consensus 168 Pt~~LD~~~~~~l~~~l~~l~~~~~tvii~sHd~~-~~~~~~d~i~~l~~-G~i~~~~~~~~~ 228 (501)
T PRK10762 168 PTDALTDTETESLFRVIRELKSQGRGIVYISHRLK-EIFEICDDVTVFRD-GQFIAEREVADL 228 (501)
T ss_pred CcCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhCCEEEEEeC-CEEEEecCcCcC
Confidence 99999999999999999999877999999999986 56678999999984 799999887543
No 326
>PRK00635 excinuclease ABC subunit A; Provisional
Probab=100.00 E-value=3.4e-33 Score=364.61 Aligned_cols=135 Identities=21% Similarity=0.316 Sum_probs=106.5
Q ss_pred CCCCCcHHHHHHHHhhhcCCCcCcHHHHHHHHHHHHHHcCCCcc-cCCcccCCCCCCCCHHHHHHHHHHHHHh---hCCC
Q 000997 913 HSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSL-SGALIGLPGINGLSTEQRKRLTIAVELV---ANPS 988 (1194)
Q Consensus 913 ~~~~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~-~~~~~~~~~~~~LSgGqrqrl~ia~aL~---~~p~ 988 (1194)
.+...||.|+|.++..-.........+..+.+ ++++.++|..+ .+.. +..||||||||++||++|+ .+|+
T Consensus 759 ~~~~~tI~evL~mtv~ea~~~f~~~~~i~~~l-~~L~~vGL~~l~l~q~-----~~tLSGGE~QRV~LAraL~~~~~~P~ 832 (1809)
T PRK00635 759 RYKGKNIADILEMTAYEAEKFFLDEPSIHEKI-HALCSLGLDYLPLGRP-----LSSLSGGEIQRLKLAYELLAPSKKPT 832 (1809)
T ss_pred ccCCCCHHHHHHcCHHHHHHcccChHHHHHHH-HHHHHcCCcchhhcCc-----cccCCHHHHHHHHHHHHHhhcCCCCC
Confidence 44578999999886542111111123334445 47888898765 4543 3579999999999999998 6999
Q ss_pred EEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCeEEEEc-----cCcEEEEeCCCC
Q 000997 989 IVFMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMK-----RGGELIYAGPLG 1055 (1194)
Q Consensus 989 illLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~~d~~~~l~-----~gG~~~~~g~~~ 1055 (1194)
+|+|||||+|||+.+...+++.|+++++.|.|||+++|+++ .+ ..+|++++|. .||+++..|++.
T Consensus 833 LLILDEPTsGLD~~~~~~Ll~lL~~L~~~G~TVIiIsHdl~-~i-~~aDrVi~L~p~gg~~~G~iv~~Gtpe 902 (1809)
T PRK00635 833 LYVLDEPTTGLHTHDIKALIYVLQSLTHQGHTVVIIEHNMH-VV-KVADYVLELGPEGGNLGGYLLASCSPE 902 (1809)
T ss_pred EEEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HH-HhCCEEEEEccCCCCCCCEEEEeCCHH
Confidence 99999999999999999999999999888999999999976 34 8899999995 368999999763
No 327
>PRK14258 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.4e-34 Score=321.61 Aligned_cols=220 Identities=22% Similarity=0.273 Sum_probs=174.7
Q ss_pred eEeecceeeeecccccccccccccceEEeeeeeEEEeCCcEEEEEccCCCChHHHHhhhcCCCCCC---eeEEEEEEcCc
Q 000997 817 MAFGNINYFVDVPVELKQEGVLEDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGG---IIEGDIYISGY 893 (1194)
Q Consensus 817 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~---~~~G~i~i~g~ 893 (1194)
+.++|+++.+ ++..+|+|+||++++||++||+|+||||||||+++|+|..++. ...|+|.++|.
T Consensus 8 l~~~nl~~~~-------------~~~~il~~is~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~g~i~~~G~i~~~g~ 74 (261)
T PRK14258 8 IKVNNLSFYY-------------DTQKILEGVSMEIYQSKVTAIIGPSGCGKSTFLKCLNRMNELESEVRVEGRVEFFNQ 74 (261)
T ss_pred EEEeeEEEEe-------------CCeeEeeceEEEEcCCcEEEEECCCCCCHHHHHHHHhcccCCCCCccccceEEECCE
Confidence 5666666544 2346999999999999999999999999999999999986531 13799999998
Q ss_pred cCCh-----hcccceeeEeecCCCCCCCCcHHHHHHHHhhhcCCCcCcHHHHHHHHHHHHHHcCCCcccCCcccCCCCCC
Q 000997 894 PKRQ-----ETFARISGYCEQNDIHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGING 968 (1194)
Q Consensus 894 ~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~ 968 (1194)
++.. ...++.++|++|++.+++ .|++||+.+....... ....+..+.+.++++.+++.+..+..... .+..
T Consensus 75 ~i~~~~~~~~~~~~~i~~~~q~~~l~~-~tv~enl~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~~~~~~~~-~~~~ 150 (261)
T PRK14258 75 NIYERRVNLNRLRRQVSMVHPKPNLFP-MSVYDNVAYGVKIVGW--RPKLEIDDIVESALKDADLWDEIKHKIHK-SALD 150 (261)
T ss_pred EhhccccchHHhhccEEEEecCCccCc-ccHHHHHHHHHHhcCC--CcHHHHHHHHHHHHHHcCCcchhhhHhcC-Cccc
Confidence 7531 234567999999988887 8999999876433211 12223345678889999885422211111 2468
Q ss_pred CCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCCcHHHHHhcCeEEEEccC--
Q 000997 969 LSTEQRKRLTIAVELVANPSIVFMDEPTSGLDARAAAIVMRTVRNIVN-TGRTIVCTIHQPSIDIFESFDELLFMKRG-- 1045 (1194)
Q Consensus 969 LSgGqrqrl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~l~~-~g~tvi~~~H~~~~~~~~~~d~~~~l~~g-- 1045 (1194)
||||||||++|||+|+.+|++|+|||||+|||+.+...+.+.|+++++ .|+|||++||+++ ++.+.||++++|++|
T Consensus 151 LSgGq~qrv~laral~~~p~vllLDEP~~~LD~~~~~~l~~~l~~l~~~~~~tiiivsH~~~-~i~~~~d~i~~l~~~~~ 229 (261)
T PRK14258 151 LSGGQQQRLCIARALAVKPKVLLMDEPCFGLDPIASMKVESLIQSLRLRSELTMVIVSHNLH-QVSRLSDFTAFFKGNEN 229 (261)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHhCCCEEEEEECCHH-HHHHhcCEEEEEccCCC
Confidence 999999999999999999999999999999999999999999999865 4899999999986 577889999999853
Q ss_pred --cEEEEeCCC
Q 000997 1046 --GELIYAGPL 1054 (1194)
Q Consensus 1046 --G~~~~~g~~ 1054 (1194)
|++++.|+.
T Consensus 230 ~~G~i~~~~~~ 240 (261)
T PRK14258 230 RIGQLVEFGLT 240 (261)
T ss_pred cCceEEEeCCH
Confidence 899999876
No 328
>PRK14262 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.3e-34 Score=320.18 Aligned_cols=207 Identities=28% Similarity=0.363 Sum_probs=166.5
Q ss_pred ceEEeeeeeEEEeCCcEEEEEccCCCChHHHHhhhcCCCCCC---eeEEEEEEcCccCCh-----hcccceeeEeecCCC
Q 000997 841 RLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGG---IIEGDIYISGYPKRQ-----ETFARISGYCEQNDI 912 (1194)
Q Consensus 841 ~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~---~~~G~i~i~g~~~~~-----~~~~~~~gyv~Q~~~ 912 (1194)
++.+|+|+||++++||+++|+||||||||||+++|+|...+. +.+|+|.++|.++.. ...++.++|++|++.
T Consensus 15 ~~~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~i~g~~~~~~~~~~~~~~~~i~~~~q~~~ 94 (250)
T PRK14262 15 EKKAVKNVTMKIFKNQITAIIGPSGCGKTTLLRSINRMNDHIPGFRVEGKIYFKGQDIYDPQLDVTEYRKKVGMVFQKPT 94 (250)
T ss_pred CceeEeeeeEeecCCCEEEEECCCCCCHHHHHHHHhccccCCCCCCcceEEEECCEEcccchhhHHHhhhhEEEEecCCc
Confidence 356999999999999999999999999999999999975421 258999999987632 234567999999998
Q ss_pred CCCCCcHHHHHHHHhhhcCCCcCcHHHHHHHHHHHHHHcCCCcccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEE
Q 000997 913 HSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFM 992 (1194)
Q Consensus 913 ~~~~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illL 992 (1194)
+++ .|++||+.+....... ......++.++++++.+++.+..+... ...+.+||||||||++||+||+.+|++|+|
T Consensus 95 ~~~-~tv~e~l~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~~~~~~-~~~~~~LS~Gq~qr~~la~al~~~p~llll 170 (250)
T PRK14262 95 PFP-MSIYDNVAFGPRIHGV--KSKHKLDRIVEESLKKAALWDEVKSEL-NKPGTRLSGGQQQRLCIARALAVEPEVILL 170 (250)
T ss_pred cCc-ccHHHHHHHHHHHcCC--CcHHHHHHHHHHHHHHcCCCchhHHHH-hCChhhcCHHHHHHHHHHHHHhCCCCEEEE
Confidence 887 8999999886533211 122233455778888888854211111 112468999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCeEEEEccCcEEEEeCCC
Q 000997 993 DEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1194)
Q Consensus 993 DEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~ 1054 (1194)
||||+|||+.++..+++.|+++.+ ++|||++||+++ .+.+.+|++++|++ |+++..|+.
T Consensus 171 DEP~~~LD~~~~~~l~~~l~~~~~-~~tili~sH~~~-~~~~~~d~i~~l~~-G~i~~~g~~ 229 (250)
T PRK14262 171 DEPTSALDPIATQRIEKLLEELSE-NYTIVIVTHNIG-QAIRIADYIAFMYR-GELIEYGPT 229 (250)
T ss_pred eCCccccCHHHHHHHHHHHHHHhc-CcEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEecCH
Confidence 999999999999999999999864 799999999976 46788999999985 788888874
No 329
>TIGR03797 NHPM_micro_ABC2 NHPM bacteriocin system ABC transporter, ATP-binding protein. Members of this protein family are ABC transporter ATP-binding subunits, part of a three-gene putative bacteriocin transport operon. The other subunits include another ATP-binding subunit (TIGR03796), which has an N-terminal propeptide cleavage domain, and an HlyD homolog (TIGR03794). In a number of genomes, a conserved propeptide sequence with a classic Gly-Gly motif
Probab=100.00 E-value=7e-35 Score=369.42 Aligned_cols=205 Identities=27% Similarity=0.364 Sum_probs=165.2
Q ss_pred eeeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCceeeEEEECCccCCCCCC---CceEEEEecCCCCCCCC
Q 000997 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVP---PRTSAYVSQQDWQVAEM 224 (1194)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~l 224 (1194)
+++|+|+|++|+|||.++|+||||||||||+++|+|.++|. +|+|.+||.++++... ++.++||+|++.+|+ .
T Consensus 466 ~~vL~~isl~i~~Ge~vaIvG~sGsGKSTLlklL~gl~~p~---~G~I~idg~~i~~~~~~~lr~~i~~v~Q~~~lf~-g 541 (686)
T TIGR03797 466 PLILDDVSLQIEPGEFVAIVGPSGSGKSTLLRLLLGFETPE---SGSVFYDGQDLAGLDVQAVRRQLGVVLQNGRLMS-G 541 (686)
T ss_pred ccceeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CCEEEECCEEcCcCCHHHHHhccEEEccCCccCc-c
Confidence 46999999999999999999999999999999999999886 9999999999887653 578999999998776 5
Q ss_pred CHHHHHHHhhhccCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhccCcchhHHHHHHHHHhCCcccccccccCccC
Q 000997 225 TVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEML 304 (1194)
Q Consensus 225 TV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~k~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~ 304 (1194)
|++|||.++.. ...+.+.++++. .+ .++.+ -.|++..||.+|+.+
T Consensus 542 TI~eNi~~~~~-----~~~e~i~~al~~---a~------------------------l~~~i--~~lp~G~dt~ige~G- 586 (686)
T TIGR03797 542 SIFENIAGGAP-----LTLDEAWEAARM---AG------------------------LAEDI--RAMPMGMHTVISEGG- 586 (686)
T ss_pred cHHHHHhcCCC-----CCHHHHHHHHHH---cC------------------------cHHHH--HhccccccccccCCC-
Confidence 99999988532 111111111110 00 11111 236778899999754
Q ss_pred CCCChhhhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEcCC
Q 000997 305 KGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEG 384 (1194)
Q Consensus 305 ~~LSGGqkqRvsia~al~~~~~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~~G 384 (1194)
.+||||||||++||||++.+|++|+||||||+||+.+..++.+.|+++ ++|+|+ ++|.. +..+.+|+|++|++|
T Consensus 587 ~~LSGGQrQRialARAll~~p~iLiLDEpTS~LD~~te~~i~~~L~~~----~~T~Ii-ItHr~-~~i~~~D~Iivl~~G 660 (686)
T TIGR03797 587 GTLSGGQRQRLLIARALVRKPRILLFDEATSALDNRTQAIVSESLERL----KVTRIV-IAHRL-STIRNADRIYVLDAG 660 (686)
T ss_pred CCCCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHh----CCeEEE-EecCh-HHHHcCCEEEEEECC
Confidence 689999999999999999999999999999999999999999999875 345544 55655 455779999999999
Q ss_pred eEEEecChhhHHH
Q 000997 385 QIVYQGPRVSVLD 397 (1194)
Q Consensus 385 ~iv~~G~~~~~~~ 397 (1194)
+++.+|+++++.+
T Consensus 661 ~iv~~G~~~~Ll~ 673 (686)
T TIGR03797 661 RVVQQGTYDELMA 673 (686)
T ss_pred EEEEECCHHHHHh
Confidence 9999999998863
No 330
>PRK11144 modC molybdate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.5e-35 Score=337.49 Aligned_cols=195 Identities=25% Similarity=0.405 Sum_probs=169.3
Q ss_pred cceEeEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCceeeEEEECCccCCCC-------CCCceEEEEecCCCCCCCCC
Q 000997 153 DLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEF-------VPPRTSAYVSQQDWQVAEMT 225 (1194)
Q Consensus 153 ~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~-------~~~~~~~yv~Q~d~~~~~lT 225 (1194)
|+|+++++|++++|+|||||||||||++|+|.++++ +|+|.++|.++... ..++.++|++|++.+++++|
T Consensus 16 ~vsl~i~~Ge~~~l~G~nGsGKSTLl~~iaGl~~p~---~G~I~~~g~~~~~~~~~~~~~~~~~~i~~v~q~~~l~~~~t 92 (352)
T PRK11144 16 TVNLTLPAQGITAIFGRSGAGKTSLINAISGLTRPQ---KGRIVLNGRVLFDAEKGICLPPEKRRIGYVFQDARLFPHYK 92 (352)
T ss_pred EEEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEEccccccccccchhhCCEEEEcCCcccCCCCc
Confidence 899999999999999999999999999999998876 99999999876431 12467999999999999999
Q ss_pred HHHHHHHhhhccCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhccCcchhHHHHHHHHHhCCcccccccccCccCC
Q 000997 226 VRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEMLK 305 (1194)
Q Consensus 226 V~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~k~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~ 305 (1194)
|+||+.|+.+.. ....++.+++.+||++..+..+ .
T Consensus 93 v~enl~~~~~~~----------------------------------------~~~~~~~~l~~~gl~~~~~~~~-----~ 127 (352)
T PRK11144 93 VRGNLRYGMAKS----------------------------------------MVAQFDKIVALLGIEPLLDRYP-----G 127 (352)
T ss_pred HHHHHHhhhhhh----------------------------------------hHHHHHHHHHHcCCchhhhCCc-----c
Confidence 999998753100 0123677899999988777655 4
Q ss_pred CCChhhhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEcCCe
Q 000997 306 GISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEGQ 385 (1194)
Q Consensus 306 ~LSGGqkqRvsia~al~~~~~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~~G~ 385 (1194)
.|||||||||+|||||+.+|++|+|||||+|||+.++..+.+.|+++.+.. +++++.++|+.+++..++|+|++|++|+
T Consensus 128 ~LSgGq~qRvalaraL~~~p~llLLDEPts~LD~~~~~~l~~~L~~l~~~~-g~tii~vTHd~~~~~~~~d~i~~l~~G~ 206 (352)
T PRK11144 128 SLSGGEKQRVAIGRALLTAPELLLMDEPLASLDLPRKRELLPYLERLAREI-NIPILYVSHSLDEILRLADRVVVLEQGK 206 (352)
T ss_pred cCCHHHHHHHHHHHHHHcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhc-CCeEEEEecCHHHHHHhCCEEEEEeCCE
Confidence 699999999999999999999999999999999999999999999987643 4556668899999999999999999999
Q ss_pred EEEecChhhHH
Q 000997 386 IVYQGPRVSVL 396 (1194)
Q Consensus 386 iv~~G~~~~~~ 396 (1194)
++..|+++++.
T Consensus 207 i~~~g~~~~i~ 217 (352)
T PRK11144 207 VKAFGPLEEVW 217 (352)
T ss_pred EEEecCHHHHH
Confidence 99999998874
No 331
>TIGR02982 heterocyst_DevA ABC exporter ATP-binding subunit, DevA family. Members of this protein family are found mostly in the Cyanobacteria, but also in the Planctomycetes. Cyanobacterial examples are involved in heterocyst formation, by which some fraction of members of the colony undergo a developmental change and become capable of nitrogen fixation. The DevBCA proteins are thought export of either heterocyst-specific glycolipids or an enzyme essential for formation of the laminated layer found in heterocysts.
Probab=100.00 E-value=1.5e-34 Score=315.12 Aligned_cols=195 Identities=28% Similarity=0.418 Sum_probs=166.5
Q ss_pred eEEeeeeeEEEeCCcEEEEEccCCCChHHHHhhhcCCCCCCeeEEEEEEcCccCCh------hcccceeeEeecCCCCCC
Q 000997 842 LQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ------ETFARISGYCEQNDIHSP 915 (1194)
Q Consensus 842 ~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~------~~~~~~~gyv~Q~~~~~~ 915 (1194)
+.+|+|+||++++|+++||+|+||||||||+++|+|..+ +.+|+|.++|.++.. ..+++.++|++|++.+++
T Consensus 18 ~~il~~vs~~i~~G~~~~I~G~nGsGKStLl~~l~G~~~--~~~G~i~~~g~~~~~~~~~~~~~~~~~i~~~~q~~~~~~ 95 (220)
T TIGR02982 18 KQVLFDINLEINPGEIVILTGPSGSGKTTLLTLIGGLRS--VQEGSLKVLGQELYGASEKELVQLRRNIGYIFQAHNLLG 95 (220)
T ss_pred eeEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCeEEEECCEEhHhcCHhHHHHHHhheEEEcCChhhcC
Confidence 679999999999999999999999999999999999876 568999999987632 134578999999999888
Q ss_pred CCcHHHHHHHHhhhcCCCcCcHHHHHHHHHHHHHHcCCCcccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCC
Q 000997 916 GLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEP 995 (1194)
Q Consensus 916 ~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEP 995 (1194)
.+|+.||+.+...... .....+..+.++++++.+++.+..+..+ ..||+|||||++|||+|+.+|++|+||||
T Consensus 96 ~~t~~~n~~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~lS~G~~qrv~laral~~~p~illlDEP 168 (220)
T TIGR02982 96 FLTARQNVQMALELQP--NLSYQEARERARAMLEAVGLGDHLDYYP-----HNLSGGQKQRVAIARALVHRPKLVLADEP 168 (220)
T ss_pred CCCHHHHHHHHHHhcc--CCCHHHHHHHHHHHHHHcCChhhhhcCh-----hhCCHHHHHHHHHHHHHhcCCCEEEEeCC
Confidence 8999999998654321 1233444567889999999977666543 57999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCCcHHHHHhcCeEEEEccCcEE
Q 000997 996 TSGLDARAAAIVMRTVRNIVN-TGRTIVCTIHQPSIDIFESFDELLFMKRGGEL 1048 (1194)
Q Consensus 996 TsgLD~~~~~~i~~~l~~l~~-~g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~ 1048 (1194)
|+|||+.++..+.+.|+++.+ .|+|||+++|+++ ..+.+|++++|.+ |++
T Consensus 169 ~~~LD~~~~~~l~~~l~~~~~~~~~tii~~sh~~~--~~~~~d~v~~l~~-g~~ 219 (220)
T TIGR02982 169 TAALDSKSGRDVVELMQKLAREQGCTILIVTHDNR--ILDVADRIVHMED-GKL 219 (220)
T ss_pred CCcCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH--HHhhCCEEEEEEC-CEE
Confidence 999999999999999999876 4899999999975 4578999999985 554
No 332
>PRK14260 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.3e-34 Score=321.48 Aligned_cols=204 Identities=23% Similarity=0.284 Sum_probs=167.4
Q ss_pred ceEEeeeeeEEEeCCcEEEEEccCCCChHHHHhhhcCCCCCC-e--eEEEEEEcCccCCh-----hcccceeeEeecCCC
Q 000997 841 RLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGG-I--IEGDIYISGYPKRQ-----ETFARISGYCEQNDI 912 (1194)
Q Consensus 841 ~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~-~--~~G~i~i~g~~~~~-----~~~~~~~gyv~Q~~~ 912 (1194)
++.+|+|+|+++++||+++|+|+||||||||+++|+|..+.. + .+|+|.++|.++.. ...++.++|++|++.
T Consensus 19 ~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLlk~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~i~~v~q~~~ 98 (259)
T PRK14260 19 TSKAIEGISMDIYRNKVTAIIGPSGCGKSTFIKTLNRISELEGPVKVEGVVDFFGQNIYDPRININRLRRQIGMVFQRPN 98 (259)
T ss_pred CeEeecceEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcCcccCCccceEEEECCEeccccccchHhhhhheEEEecccc
Confidence 356999999999999999999999999999999999976521 2 48999999987532 234567999999998
Q ss_pred CCCCCcHHHHHHHHhhhcCCCcCcHHHHHHHHHHHHHHcCCCc----ccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCC
Q 000997 913 HSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTS----LSGALIGLPGINGLSTEQRKRLTIAVELVANPS 988 (1194)
Q Consensus 913 ~~~~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~----~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~ 988 (1194)
+++ .|++||+.+....+. ........+.++++++.+++.+ ..+. .+..||||||||++|||||+.+|+
T Consensus 99 l~~-~tv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~-----~~~~LS~G~~qrv~laral~~~p~ 170 (259)
T PRK14260 99 PFP-MSIYENVAYGVRISA--KLPQADLDEIVESALKGAALWQEVKDKLNK-----SALGLSGGQQQRLCIARALAIKPK 170 (259)
T ss_pred cCC-ccHHHHHHHHHHHhc--CCCHHHHHHHHHHHHHHcCCcchhhhHhcC-----CcccCCHHHHHHHHHHHHHhcCCC
Confidence 887 899999987654331 1122333456778888888742 2222 246899999999999999999999
Q ss_pred EEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCeEEEEcc----CcEEEEeCCC
Q 000997 989 IVFMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKR----GGELIYAGPL 1054 (1194)
Q Consensus 989 illLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~----gG~~~~~g~~ 1054 (1194)
+|+|||||+|||+.++..+.+.|+++++ ++|||++||+++ ++.+.+|++++|+. .|++++.|+.
T Consensus 171 lllLDEPt~~LD~~~~~~l~~~l~~~~~-~~tiii~tH~~~-~i~~~~d~i~~l~~~~~~~G~i~~~~~~ 238 (259)
T PRK14260 171 VLLMDEPCSALDPIATMKVEELIHSLRS-ELTIAIVTHNMQ-QATRVSDFTAFFSTDESRIGQMVEFGVT 238 (259)
T ss_pred EEEEcCCCccCCHHHHHHHHHHHHHHhc-CCEEEEEeCCHH-HHHHhcCeEEEEeccCCCCceEEEeCCH
Confidence 9999999999999999999999999865 699999999987 57788999999973 4899999875
No 333
>PRK10895 lipopolysaccharide ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.4e-34 Score=320.17 Aligned_cols=206 Identities=19% Similarity=0.334 Sum_probs=171.1
Q ss_pred eeeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCceeeEEEECCccCCCCCC----CceEEEEecCCCCCCC
Q 000997 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVP----PRTSAYVSQQDWQVAE 223 (1194)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~~~----~~~~~yv~Q~d~~~~~ 223 (1194)
+.+|+|+|+++++|++++|+|||||||||||++|+|.+++. +|+|+++|.++..... ++.++|++|++.+++.
T Consensus 16 ~~~l~~~sl~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~ 92 (241)
T PRK10895 16 RRVVEDVSLTVNSGEIVGLLGPNGAGKTTTFYMVVGIVPRD---AGNIIIDDEDISLLPLHARARRGIGYLPQEASIFRR 92 (241)
T ss_pred EEEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEECCCCCHHHHHHhCeEEeccCCccccc
Confidence 46999999999999999999999999999999999998776 9999999988754332 3569999999988998
Q ss_pred CCHHHHHHHhhhccCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhccCcchhHHHHHHHHHhCCcccccccccCcc
Q 000997 224 MTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEM 303 (1194)
Q Consensus 224 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~k~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~ 303 (1194)
+||.||+.+..+....... .+....++.+++.+||++..+..+
T Consensus 93 ~tv~enl~~~~~~~~~~~~---------------------------------~~~~~~~~~~l~~~~l~~~~~~~~---- 135 (241)
T PRK10895 93 LSVYDNLMAVLQIRDDLSA---------------------------------EQREDRANELMEEFHIEHLRDSMG---- 135 (241)
T ss_pred CcHHHHHhhhhhcccccCH---------------------------------HHHHHHHHHHHHHcCCHHHhhcch----
Confidence 9999999875432110000 001224677889999987665544
Q ss_pred CCCCChhhhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEcC
Q 000997 304 LKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSE 383 (1194)
Q Consensus 304 ~~~LSGGqkqRvsia~al~~~~~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~~ 383 (1194)
+.|||||||||+||+||+.+|++|+|||||+|||+.++..+.+.++.++. . +.+|+.++|+..++.+++|++++|++
T Consensus 136 -~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~-g~tiii~sH~~~~~~~~~d~v~~l~~ 212 (241)
T PRK10895 136 -QSLSGGERRRVEIARALAANPKFILLDEPFAGVDPISVIDIKRIIEHLRD-S-GLGVLITDHNVRETLAVCERAYIVSQ 212 (241)
T ss_pred -hhCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHh-c-CCEEEEEEcCHHHHHHhcCEEEEEeC
Confidence 46999999999999999999999999999999999999999999998764 3 44566677888899999999999999
Q ss_pred CeEEEecChhhHH
Q 000997 384 GQIVYQGPRVSVL 396 (1194)
Q Consensus 384 G~iv~~G~~~~~~ 396 (1194)
|++++.|+++++.
T Consensus 213 G~i~~~~~~~~~~ 225 (241)
T PRK10895 213 GHLIAHGTPTEIL 225 (241)
T ss_pred CeEEeeCCHHHHh
Confidence 9999999987763
No 334
>COG4598 HisP ABC-type histidine transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=2.7e-35 Score=289.06 Aligned_cols=213 Identities=22% Similarity=0.325 Sum_probs=178.7
Q ss_pred cccccccccceEEeeeeeEEEeCCcEEEEEccCCCChHHHHhhhcCCCCCCeeEEEEEEcCccCC-------------h-
Q 000997 832 LKQEGVLEDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKR-------------Q- 897 (1194)
Q Consensus 832 ~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~-------------~- 897 (1194)
+.+..+.++...+|++||++.+.|+++.|+|.|||||||+|+||.-+.+ +..|.|.+||..+. .
T Consensus 9 v~dlHK~~G~~eVLKGvSL~A~~GdVisIIGsSGSGKSTfLRCiN~LE~--P~~G~I~v~geei~~k~~~~G~l~~ad~~ 86 (256)
T COG4598 9 VEDLHKRYGEHEVLKGVSLQANAGDVISIIGSSGSGKSTFLRCINFLEK--PSAGSIRVNGEEIRLKRDKDGQLKPADKR 86 (256)
T ss_pred hhHHHhhcccchhhcceeeecCCCCEEEEecCCCCchhHHHHHHHhhcC--CCCceEEECCeEEEeeeCCCCCeeeCCHH
Confidence 3444556788899999999999999999999999999999999987766 56899999996531 1
Q ss_pred --hcccceeeEeecCCCCCCCCcHHHHHHHHhhhcCCCcCcHHHHHHHHHHHHHHcCCCcccCCcccCCCCCCCCHHHHH
Q 000997 898 --ETFARISGYCEQNDIHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRK 975 (1194)
Q Consensus 898 --~~~~~~~gyv~Q~~~~~~~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrq 975 (1194)
...+...|+|+|+..++..+||.||+.-... +. ...++.+..++.+..+..+|+.+.++.+. ..|||||+|
T Consensus 87 q~~r~Rs~L~mVFQ~FNLWsHmtvLeNViEaPv-hV-Lg~~k~ea~e~Ae~~L~kVGi~ek~~~YP-----~~LSGGQQQ 159 (256)
T COG4598 87 QLQRLRTRLGMVFQHFNLWSHMTVLENVIEAPV-HV-LGVSKAEAIERAEKYLAKVGIAEKADAYP-----AHLSGGQQQ 159 (256)
T ss_pred HHHHHHHHhhHhhhhcchhHHHHHHHHHHhcch-Hh-hcCCHHHHHHHHHHHHHHhCchhhhhcCc-----cccCchHHH
Confidence 1234467999999999999999999975422 11 13455666677888899999988888653 479999999
Q ss_pred HHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCeEEEEccCcEEEEeCCCC
Q 000997 976 RLTIAVELVANPSIVFMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLG 1055 (1194)
Q Consensus 976 rl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~~ 1055 (1194)
|++|||||+.+|+++++|||||.|||+-.-.+++.+++|+++|+|.+++||.+.. .-+...++++|.+ |.+...||+.
T Consensus 160 R~aIARaLameP~vmLFDEPTSALDPElVgEVLkv~~~LAeEgrTMv~VTHEM~F-AR~Vss~v~fLh~-G~iEE~G~P~ 237 (256)
T COG4598 160 RVAIARALAMEPEVMLFDEPTSALDPELVGEVLKVMQDLAEEGRTMVVVTHEMGF-ARDVSSHVIFLHQ-GKIEEEGPPE 237 (256)
T ss_pred HHHHHHHHhcCCceEeecCCcccCCHHHHHHHHHHHHHHHHhCCeEEEEeeehhH-HHhhhhheEEeec-ceecccCChH
Confidence 9999999999999999999999999999999999999999999999999998764 3455789999985 8999999874
No 335
>PRK14253 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.6e-34 Score=321.24 Aligned_cols=207 Identities=24% Similarity=0.263 Sum_probs=165.9
Q ss_pred ceEEeeeeeEEEeCCcEEEEEccCCCChHHHHhhhcCCCCCC---eeEEEEEEcCccCC----hhcccceeeEeecCCCC
Q 000997 841 RLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGG---IIEGDIYISGYPKR----QETFARISGYCEQNDIH 913 (1194)
Q Consensus 841 ~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~---~~~G~i~i~g~~~~----~~~~~~~~gyv~Q~~~~ 913 (1194)
++.+|+|+||++++||+++|+||||||||||+++|+|..++. +.+|+|.++|.++. ....++.++|++|++.+
T Consensus 15 ~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~~~~~~~~~~~~~~i~~~~q~~~~ 94 (249)
T PRK14253 15 ENQALKSINLPIPARQVTALIGPSGCGKSTLLRCLNRMNDLIEGVKITGKLTMDGEDIYGNIDVADLRIKVGMVFQKPNP 94 (249)
T ss_pred CeeeeecceEEecCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCceEEEECCEEcccccchHHHHhheeEEecCCCc
Confidence 457999999999999999999999999999999999976521 35899999998753 12345679999999988
Q ss_pred CCCCcHHHHHHHHhhhcCCCcCcHHHHHHHHHHHHHHcCCCcccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEe
Q 000997 914 SPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMD 993 (1194)
Q Consensus 914 ~~~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illLD 993 (1194)
++ .|+.||+.+....... .......+.+.++++.+++.+....... ..+..|||||||||+|||+|+.+|+||+||
T Consensus 95 ~~-~tv~~~l~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~~~~~~~~~-~~~~~LS~G~~qrv~laral~~~p~llllD 170 (249)
T PRK14253 95 FP-MSIYENVAYGLRAQGI--KDKKVLDEVVERSLRGAALWDEVKDRLK-SHAFGLSGGQQQRLCIARTIAMEPDVILMD 170 (249)
T ss_pred Cc-ccHHHHHHhHHHhcCC--CchHHHHHHHHHHHHHcCCchhhhHHhh-cCcccCCHHHHHHHHHHHHHHcCCCEEEEe
Confidence 87 8999999876432211 1122333556778888887532111111 123589999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCeEEEEccCcEEEEeCCC
Q 000997 994 EPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1194)
Q Consensus 994 EPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~ 1054 (1194)
|||+|||+.++..+++.|+++++ ++|||++||+++ .+.+.+|++++|+ +|+++..|+.
T Consensus 171 EP~~~LD~~~~~~l~~~l~~~~~-~~tii~~sh~~~-~~~~~~d~i~~l~-~G~i~~~g~~ 228 (249)
T PRK14253 171 EPTSALDPIATHKIEELMEELKK-NYTIVIVTHSMQ-QARRISDRTAFFL-MGELVEHDDT 228 (249)
T ss_pred CCCccCCHHHHHHHHHHHHHHhc-CCeEEEEecCHH-HHHHhCCEEEEEE-CCEEEEeCCH
Confidence 99999999999999999999865 689999999986 5777899999998 4799988874
No 336
>TIGR02673 FtsE cell division ATP-binding protein FtsE. This model describes FtsE, a member of the ABC transporter ATP-binding protein family. This protein, and its permease partner FtsX, localize to the division site. In a number of species, the ftsEX gene pair is located next to FtsY, the signal recognition particle-docking protein.
Probab=100.00 E-value=8.6e-35 Score=315.97 Aligned_cols=194 Identities=27% Similarity=0.397 Sum_probs=162.7
Q ss_pred eeeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCceeeEEEECCccCCCCC------CCceEEEEecCCCCC
Q 000997 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV------PPRTSAYVSQQDWQV 221 (1194)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~~------~~~~~~yv~Q~d~~~ 221 (1194)
.++|+|+|++|++|++++|+||||||||||+++|+|.+++. +|+|.++|.++.... .++.++|++|++.++
T Consensus 15 ~~il~~is~~i~~G~~~~l~G~nGsGKSTLl~~i~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~i~~~~q~~~~~ 91 (214)
T TIGR02673 15 VAALHDVSLHIRKGEFLFLTGPSGAGKTTLLKLLYGALTPS---RGQVRIAGEDVNRLRGRQLPLLRRRIGVVFQDFRLL 91 (214)
T ss_pred ceeecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEEcccCCHHHHHHHHhheEEEecChhhc
Confidence 35999999999999999999999999999999999998775 999999998876432 235799999999889
Q ss_pred CCCCHHHHHHHhhhccCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhccCcchhHHHHHHHHHhCCcccccccccC
Q 000997 222 AEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGD 301 (1194)
Q Consensus 222 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~k~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 301 (1194)
+.+||+||+.++....+... ...+..++++++.+||.+..++.+
T Consensus 92 ~~~tv~~~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~-- 135 (214)
T TIGR02673 92 PDRTVYENVALPLEVRGKKE----------------------------------REIQRRVGAALRQVGLEHKADAFP-- 135 (214)
T ss_pred cCCcHHHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCChhhhhCCh--
Confidence 99999999988643221000 001224677899999987666655
Q ss_pred ccCCCCChhhhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEE
Q 000997 302 EMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILL 381 (1194)
Q Consensus 302 ~~~~~LSGGqkqRvsia~al~~~~~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL 381 (1194)
..|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++.+. +++|+.++|..+++..++|++++|
T Consensus 136 ---~~LS~G~~qrl~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~--~~tii~~tH~~~~~~~~~d~i~~l 210 (214)
T TIGR02673 136 ---EQLSGGEQQRVAIARAIVNSPPLLLADEPTGNLDPDLSERILDLLKRLNKR--GTTVIVATHDLSLVDRVAHRVIIL 210 (214)
T ss_pred ---hhCCHHHHHHHHHHHHHhCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHc--CCEEEEEeCCHHHHHHhcCEEEEe
Confidence 469999999999999999999999999999999999999999999998642 455666788889999999999999
Q ss_pred cCCe
Q 000997 382 SEGQ 385 (1194)
Q Consensus 382 ~~G~ 385 (1194)
++|+
T Consensus 211 ~~G~ 214 (214)
T TIGR02673 211 DDGR 214 (214)
T ss_pred cCCC
Confidence 9985
No 337
>PRK14257 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.1e-34 Score=330.18 Aligned_cols=211 Identities=21% Similarity=0.286 Sum_probs=171.5
Q ss_pred eeeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCC--CceeeEEEECCccCCCC-----CCCceEEEEecCCCC
Q 000997 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHH--LQVSGKITYNGHGFKEF-----VPPRTSAYVSQQDWQ 220 (1194)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~--~~~~G~i~~~G~~~~~~-----~~~~~~~yv~Q~d~~ 220 (1194)
.++|+|+|++|++|++++|+|||||||||||++|+|...+. .+.+|+|.++|.++... ..++.++||+|++++
T Consensus 95 ~~~L~~is~~I~~Ge~v~IvG~~GsGKSTLl~~L~g~~~~~~~~p~~G~I~idG~~i~~~~~~~~~lr~~i~~v~q~~~~ 174 (329)
T PRK14257 95 KHVLHDLNLDIKRNKVTAFIGPSGCGKSTFLRNLNQLNDLIEGTSHEGEIYFLGTNTRSKKISSLELRTRIGMVFQKPTP 174 (329)
T ss_pred ceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEccccccchHhhhccEEEEecCCcc
Confidence 35999999999999999999999999999999999987531 13489999999987532 235679999999997
Q ss_pred CCCCCHHHHHHHhhhccCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhccCcchhHHHHHHHHHhCCccccccccc
Q 000997 221 VAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVG 300 (1194)
Q Consensus 221 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~k~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg 300 (1194)
+. .||+|||.|+....+... .+ ..+..++.+++.++|.+..++.++
T Consensus 175 ~~-~ti~eNi~~~~~~~~~~~-~~--------------------------------~~~~~~~~~l~~~~L~~~l~~~~~ 220 (329)
T PRK14257 175 FE-MSIFDNVAYGPRNNGIND-RK--------------------------------ILEKIVEKSLKSAALWDEVKDDLD 220 (329)
T ss_pred CC-CcHHHHHHhHHHhcCCCh-HH--------------------------------HHHHHHHHHHHHcCCcchhhhhhh
Confidence 75 799999998643221000 00 001225667778887655556665
Q ss_pred CccCCCCChhhhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEE
Q 000997 301 DEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVIL 380 (1194)
Q Consensus 301 ~~~~~~LSGGqkqRvsia~al~~~~~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vil 380 (1194)
. ...+|||||||||+|||||+.+|+||+|||||+|||+.+...+.+.|+++.+ + .+|++++|....+.+.+|+|++
T Consensus 221 ~-~~~~LSgGqkqRl~LARAl~~~p~IlLLDEPts~LD~~~~~~i~~~i~~l~~--~-~Tii~iTH~l~~i~~~~Driiv 296 (329)
T PRK14257 221 K-AGNALSGGQQQRLCIARAIALEPEVLLMDEPTSALDPIATAKIEELILELKK--K-YSIIIVTHSMAQAQRISDETVF 296 (329)
T ss_pred C-CcccCCHHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhc--C-CEEEEEeCCHHHHHHhCCEEEE
Confidence 4 4568999999999999999999999999999999999999999999998764 3 5677788999999999999999
Q ss_pred EcCCeEEEecChhhHH
Q 000997 381 LSEGQIVYQGPRVSVL 396 (1194)
Q Consensus 381 L~~G~iv~~G~~~~~~ 396 (1194)
|++|+++..|+++++.
T Consensus 297 l~~G~i~e~g~~~~l~ 312 (329)
T PRK14257 297 FYQGWIEEAGETKTIF 312 (329)
T ss_pred EECCEEEEeCCHHHHh
Confidence 9999999999998874
No 338
>KOG0057 consensus Mitochondrial Fe/S cluster exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=2.3e-35 Score=335.92 Aligned_cols=212 Identities=23% Similarity=0.397 Sum_probs=172.6
Q ss_pred ccceeEeecceeeeecccccccccccccceEEeeeeeEEEeCCcEEEEEccCCCChHHHHhhhcCCCCCCeeEEEEEEcC
Q 000997 813 QPLSMAFGNINYFVDVPVELKQEGVLEDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISG 892 (1194)
Q Consensus 813 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g 892 (1194)
.+-++.|+|+++.+. +++++|++|||+|++||.+||+|+|||||||++++|.+... .+|+|+|||
T Consensus 348 ~~~~I~F~dV~f~y~------------~k~~iL~gvsf~I~kGekVaIvG~nGsGKSTilr~LlrF~d---~sG~I~IdG 412 (591)
T KOG0057|consen 348 FGGSIEFDDVHFSYG------------PKRKVLKGVSFTIPKGEKVAIVGSNGSGKSTILRLLLRFFD---YSGSILIDG 412 (591)
T ss_pred CCCcEEEEeeEEEeC------------CCCceecceeEEecCCCEEEEECCCCCCHHHHHHHHHHHhc---cCCcEEECC
Confidence 344689999988773 34569999999999999999999999999999999999765 479999999
Q ss_pred ccCC---hhcccceeeEeecCCCCCCCCcHHHHHHHHhhhcCCCcCcHHHHHHHHHHHHHHcCCCcc-------cCCccc
Q 000997 893 YPKR---QETFARISGYCEQNDIHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSL-------SGALIG 962 (1194)
Q Consensus 893 ~~~~---~~~~~~~~gyv~Q~~~~~~~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~-------~~~~~~ 962 (1194)
.++. .+..|+.+||||||..++.+ ||.+|+.|+. .+.+.+ .|-++.+..++.+. ..+.+|
T Consensus 413 ~dik~~~~~SlR~~Ig~VPQd~~LFnd-TIl~NI~YGn-----~sas~e----eV~e~~k~a~~hd~i~~l~~GY~T~VG 482 (591)
T KOG0057|consen 413 QDIKEVSLESLRQSIGVVPQDSVLFND-TILYNIKYGN-----PSASDE----EVVEACKRAGLHDVISRLPDGYQTLVG 482 (591)
T ss_pred eeHhhhChHHhhhheeEeCCcccccch-hHHHHhhcCC-----CCcCHH----HHHHHHHHcCcHHHHHhccccchhhHh
Confidence 8864 46788999999998888754 9999999863 223332 23344444444332 233455
Q ss_pred CCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCeEEEE
Q 000997 963 LPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFM 1042 (1194)
Q Consensus 963 ~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~~d~~~~l 1042 (1194)
..+ ..|||||||||+||||++.+|+|+++|||||.||..+.+.+++.++.. ..|+|+|++.|+. ++.+.||+|++|
T Consensus 483 erG-~~LSGGekQrvslaRa~lKda~Il~~DEaTS~LD~~TE~~i~~~i~~~-~~~rTvI~IvH~l--~ll~~~DkI~~l 558 (591)
T KOG0057|consen 483 ERG-LMLSGGEKQRVSLARAFLKDAPILLLDEATSALDSETEREILDMIMDV-MSGRTVIMIVHRL--DLLKDFDKIIVL 558 (591)
T ss_pred hcc-cccccchHHHHHHHHHHhcCCCeEEecCcccccchhhHHHHHHHHHHh-cCCCeEEEEEecc--hhHhcCCEEEEE
Confidence 443 469999999999999999999999999999999999999999999994 4699999999995 467899999999
Q ss_pred ccCcEEEEeCCC
Q 000997 1043 KRGGELIYAGPL 1054 (1194)
Q Consensus 1043 ~~gG~~~~~g~~ 1054 (1194)
++ |++...|+-
T Consensus 559 ~n-G~v~e~gth 569 (591)
T KOG0057|consen 559 DN-GTVKEYGTH 569 (591)
T ss_pred EC-CeeEEeccH
Confidence 85 788888874
No 339
>PRK10619 histidine/lysine/arginine/ornithine transporter subunit; Provisional
Probab=100.00 E-value=2.3e-34 Score=321.35 Aligned_cols=205 Identities=22% Similarity=0.272 Sum_probs=169.7
Q ss_pred eeeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCceeeEEEECCccCCCC----------------CCCceE
Q 000997 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEF----------------VPPRTS 211 (1194)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~----------------~~~~~~ 211 (1194)
+++|+|+|+.|++|++++|+||||||||||+++|+|.+++. +|+|+++|.++... ..++.+
T Consensus 18 ~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i 94 (257)
T PRK10619 18 HEVLKGVSLQANAGDVISIIGSSGSGKSTFLRCINFLEKPS---EGSIVVNGQTINLVRDKDGQLKVADKNQLRLLRTRL 94 (257)
T ss_pred EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CeEEEECCEEcccccccccccccccchHHHHHhhce
Confidence 36999999999999999999999999999999999998775 89999999876421 123579
Q ss_pred EEEecCCCCCCCCCHHHHHHHhhh-ccCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhccCcchhHHHHHHHHHhC
Q 000997 212 AYVSQQDWQVAEMTVRETLDFAGQ-CQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILG 290 (1194)
Q Consensus 212 ~yv~Q~d~~~~~lTV~E~l~f~~~-~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~k~~~~~~~~~~~~~~~~l~~lg 290 (1194)
+|++|++.+++.+||+||+.++.. ..+.. . ......+.++++.+|
T Consensus 95 ~~v~q~~~l~~~~sv~enl~~~~~~~~~~~-------~---------------------------~~~~~~~~~~l~~~g 140 (257)
T PRK10619 95 TMVFQHFNLWSHMTVLENVMEAPIQVLGLS-------K---------------------------QEARERAVKYLAKVG 140 (257)
T ss_pred EEEecCcccCCCCcHHHHHHHHHHHhCCCC-------H---------------------------HHHHHHHHHHHHHcC
Confidence 999999998999999999987431 11100 0 001224677899999
Q ss_pred Ccccc-cccccCccCCCCChhhhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChh
Q 000997 291 LDTCA-DTLVGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAP 369 (1194)
Q Consensus 291 L~~~~-dt~vg~~~~~~LSGGqkqRvsia~al~~~~~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~ 369 (1194)
|.+.. +.. ...|||||||||+||+||+.+|++++|||||+|||+.+...+.+.|+++++. +.+|+.++|+..
T Consensus 141 l~~~~~~~~-----~~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~--g~tiiivsH~~~ 213 (257)
T PRK10619 141 IDERAQGKY-----PVHLSGGQQQRVSIARALAMEPEVLLFDEPTSALDPELVGEVLRIMQQLAEE--GKTMVVVTHEMG 213 (257)
T ss_pred CChhhhhCC-----cccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhc--CCEEEEEeCCHH
Confidence 97653 443 4579999999999999999999999999999999999999999999998652 455666888889
Q ss_pred HHHhhcCeEEEEcCCeEEEecChhhHH
Q 000997 370 EAYELFDDVILLSEGQIVYQGPRVSVL 396 (1194)
Q Consensus 370 ~~~~~~D~vilL~~G~iv~~G~~~~~~ 396 (1194)
++..+||+|++|++|++++.|+.+++.
T Consensus 214 ~~~~~~d~i~~l~~G~i~~~~~~~~~~ 240 (257)
T PRK10619 214 FARHVSSHVIFLHQGKIEEEGAPEQLF 240 (257)
T ss_pred HHHHhcCEEEEEECCEEEEeCCHHHhh
Confidence 999999999999999999999987763
No 340
>PRK13642 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.3e-34 Score=324.23 Aligned_cols=200 Identities=26% Similarity=0.315 Sum_probs=169.4
Q ss_pred eEEeeeeeEEEeCCcEEEEEccCCCChHHHHhhhcCCCCCCeeEEEEEEcCccCCh---hcccceeeEeecCCC-CCCCC
Q 000997 842 LQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ---ETFARISGYCEQNDI-HSPGL 917 (1194)
Q Consensus 842 ~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~---~~~~~~~gyv~Q~~~-~~~~l 917 (1194)
..+|+|||+++++||++||+|+||||||||+++|+|..+ +.+|+|.++|.++.. ...++.+||++|++. .++..
T Consensus 20 ~~~l~~v~l~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~i~~~~~~~~~~~i~~v~q~~~~~~~~~ 97 (277)
T PRK13642 20 VNQLNGVSFSITKGEWVSIIGQNGSGKSTTARLIDGLFE--EFEGKVKIDGELLTAENVWNLRRKIGMVFQNPDNQFVGA 97 (277)
T ss_pred CeeeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCC--CCCCEEEECCEECCcCCHHHHhcceEEEEECHHHhhccC
Confidence 459999999999999999999999999999999999876 568999999987643 234677999999974 56778
Q ss_pred cHHHHHHHHhhhcCCCcCcHHHHHHHHHHHHHHcCCCcccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCC
Q 000997 918 TVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTS 997 (1194)
Q Consensus 918 Tv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEPTs 997 (1194)
||.||+.+..... .....+..+.++++++.+++.+..+.. +..||||||||++|||+|+.+|++|+|||||+
T Consensus 98 tv~eni~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~G~~qrv~lAraL~~~p~llllDEPt~ 169 (277)
T PRK13642 98 TVEDDVAFGMENQ---GIPREEMIKRVDEALLAVNMLDFKTRE-----PARLSGGQKQRVAVAGIIALRPEIIILDESTS 169 (277)
T ss_pred CHHHHHHhhHHHc---CCCHHHHHHHHHHHHHHCCCHhHhhCC-----cccCCHHHHHHHHHHHHHHcCCCEEEEeCCcc
Confidence 9999998765322 122334445678999999998776654 35899999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCeEEEEccCcEEEEeCCC
Q 000997 998 GLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1194)
Q Consensus 998 gLD~~~~~~i~~~l~~l~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~ 1054 (1194)
|||+.++..+++.|++++++ |.|||++||+++. + ..+|++++|++ |+++..|+.
T Consensus 170 ~LD~~~~~~l~~~l~~l~~~~g~tiil~sH~~~~-~-~~~d~i~~l~~-G~i~~~g~~ 224 (277)
T PRK13642 170 MLDPTGRQEIMRVIHEIKEKYQLTVLSITHDLDE-A-ASSDRILVMKA-GEIIKEAAP 224 (277)
T ss_pred cCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHH-H-HhCCEEEEEEC-CEEEEeCCH
Confidence 99999999999999999875 9999999999763 4 46999999985 788888875
No 341
>PRK09700 D-allose transporter ATP-binding protein; Provisional
Probab=100.00 E-value=9.8e-35 Score=355.66 Aligned_cols=208 Identities=27% Similarity=0.329 Sum_probs=173.7
Q ss_pred cceEEeeeeeEEEeCCcEEEEEccCCCChHHHHhhhcCCCCCCeeEEEEEEcCccCChh----cccceeeEeecCCCCCC
Q 000997 840 DRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQE----TFARISGYCEQNDIHSP 915 (1194)
Q Consensus 840 ~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~----~~~~~~gyv~Q~~~~~~ 915 (1194)
+++.+|+||||++++||++||+||||||||||+++|+|... +.+|+|.++|.++... ..++.+|||+|++.+++
T Consensus 16 ~~~~il~~vs~~i~~Ge~~~liG~nGsGKSTLl~~i~Gl~~--p~~G~i~~~g~~i~~~~~~~~~~~~i~~v~q~~~~~~ 93 (510)
T PRK09700 16 GPVHALKSVNLTVYPGEIHALLGENGAGKSTLMKVLSGIHE--PTKGTITINNINYNKLDHKLAAQLGIGIIYQELSVID 93 (510)
T ss_pred CCeEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCcC--CCccEEEECCEECCCCCHHHHHHCCeEEEeecccccC
Confidence 34579999999999999999999999999999999999876 4689999999876421 12356999999998899
Q ss_pred CCcHHHHHHHHhhhc----CCCcCcHHHHHHHHHHHHHHcCCCcccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCEEE
Q 000997 916 GLTVLESLLFSAWLR----LPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVF 991 (1194)
Q Consensus 916 ~lTv~e~l~f~~~lr----~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~ill 991 (1194)
.+||+||+.++.... ........+..+.++++++.+++.+..+..+ .+|||||||||+||++|+.+|+|||
T Consensus 94 ~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~-----~~LSgG~~qrv~ia~al~~~p~lll 168 (510)
T PRK09700 94 ELTVLENLYIGRHLTKKVCGVNIIDWREMRVRAAMMLLRVGLKVDLDEKV-----ANLSISHKQMLEIAKTLMLDAKVII 168 (510)
T ss_pred CCcHHHHhhhccccccccccccccCHHHHHHHHHHHHHHcCCCCCcccch-----hhCCHHHHHHHHHHHHHhcCCCEEE
Confidence 999999998753211 0000122334456888999999987766654 5899999999999999999999999
Q ss_pred EeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCeEEEEccCcEEEEeCCCCC
Q 000997 992 MDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLGS 1056 (1194)
Q Consensus 992 LDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~~~ 1056 (1194)
|||||+|||+.++..+++.|++++++|.|||++||+++ .+...||++++|+ +|++++.|+..+
T Consensus 169 LDEPt~~LD~~~~~~l~~~l~~l~~~g~tiiivsHd~~-~~~~~~d~v~~l~-~G~i~~~g~~~~ 231 (510)
T PRK09700 169 MDEPTSSLTNKEVDYLFLIMNQLRKEGTAIVYISHKLA-EIRRICDRYTVMK-DGSSVCSGMVSD 231 (510)
T ss_pred EeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHH-HHHHhCCEEEEEE-CCEEeeecchhh
Confidence 99999999999999999999999888999999999976 4667899999998 578999988654
No 342
>TIGR03410 urea_trans_UrtE urea ABC transporter, ATP-binding protein UrtE. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=100.00 E-value=1.4e-34 Score=317.92 Aligned_cols=202 Identities=26% Similarity=0.318 Sum_probs=167.3
Q ss_pred eeeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCceeeEEEECCccCCCCCC----CceEEEEecCCCCCCC
Q 000997 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVP----PRTSAYVSQQDWQVAE 223 (1194)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~~~----~~~~~yv~Q~d~~~~~ 223 (1194)
.++|+|+|+++++|++++|+|||||||||||++|+|.++|. +|+|.++|.++..... ++.++|++|++.+++.
T Consensus 13 ~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~ 89 (230)
T TIGR03410 13 SHILRGVSLEVPKGEVTCVLGRNGVGKTTLLKTLMGLLPVK---SGSIRLDGEDITKLPPHERARAGIAYVPQGREIFPR 89 (230)
T ss_pred eEEecceeeEECCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CCEEEECCEECCCCCHHHHHHhCeEEeccCCcccCC
Confidence 36999999999999999999999999999999999999876 9999999988754322 3569999999998999
Q ss_pred CCHHHHHHHhhhccCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhccCcchhHHHHHHHHHhC-CcccccccccCc
Q 000997 224 MTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILG-LDTCADTLVGDE 302 (1194)
Q Consensus 224 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~k~~~~~~~~~~~~~~~~l~~lg-L~~~~dt~vg~~ 302 (1194)
+||+||+.++....+.. .....+.+++.++ +.+..++.+
T Consensus 90 ~tv~~~l~~~~~~~~~~-------------------------------------~~~~~~~~l~~~~~l~~~~~~~~--- 129 (230)
T TIGR03410 90 LTVEENLLTGLAALPRR-------------------------------------SRKIPDEIYELFPVLKEMLGRRG--- 129 (230)
T ss_pred CcHHHHHHHHHHhcCcc-------------------------------------hHHHHHHHHHHHHhHHHHhhCCh---
Confidence 99999998764322100 0011345566665 455445544
Q ss_pred cCCCCChhhhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEc
Q 000997 303 MLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLS 382 (1194)
Q Consensus 303 ~~~~LSGGqkqRvsia~al~~~~~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~ 382 (1194)
+.|||||||||+||+||+.+|++++|||||+|||+.++.++.+.|+++++.. +++++.++|..+++..++|+|++|+
T Consensus 130 --~~LS~G~~qrv~la~al~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~-~~tii~~sH~~~~~~~~~d~v~~l~ 206 (230)
T TIGR03410 130 --GDLSGGQQQQLAIARALVTRPKLLLLDEPTEGIQPSIIKDIGRVIRRLRAEG-GMAILLVEQYLDFARELADRYYVME 206 (230)
T ss_pred --hhCCHHHHHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHcC-CcEEEEEeCCHHHHHHhCCEEEEEE
Confidence 4699999999999999999999999999999999999999999999987532 4556668888899999999999999
Q ss_pred CCeEEEecChhhH
Q 000997 383 EGQIVYQGPRVSV 395 (1194)
Q Consensus 383 ~G~iv~~G~~~~~ 395 (1194)
+|++++.|+.+++
T Consensus 207 ~g~i~~~~~~~~~ 219 (230)
T TIGR03410 207 RGRVVASGAGDEL 219 (230)
T ss_pred CCEEEEECCHHHc
Confidence 9999999998765
No 343
>cd03292 ABC_FtsE_transporter FtsE is a hydrophilic nucleotide-binding protein that binds FtsX to form a heterodimeric ATP-binding cassette (ABC)-type transporter that associates with the bacterial inner membrane. The FtsE/X transporter is thought to be involved in cell division and is important for assembly or stability of the septal ring.
Probab=100.00 E-value=8.2e-35 Score=316.17 Aligned_cols=195 Identities=27% Similarity=0.382 Sum_probs=163.6
Q ss_pred eeeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCceeeEEEECCccCCCCC------CCceEEEEecCCCCC
Q 000997 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV------PPRTSAYVSQQDWQV 221 (1194)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~~------~~~~~~yv~Q~d~~~ 221 (1194)
+++|+|+|+++++|++++|+||||||||||+++|+|.+++. +|+|.++|.++.... .++.++|++|++.++
T Consensus 14 ~~~l~~~sl~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~i~~~~~~~~~~~~~~i~~v~q~~~~~ 90 (214)
T cd03292 14 TAALDGINISISAGEFVFLVGPSGAGKSTLLKLIYKEELPT---SGTIRVNGQDVSDLRGRAIPYLRRKIGVVFQDFRLL 90 (214)
T ss_pred ceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---ceEEEECCEEcccCCHHHHHHHHHheEEEecCchhc
Confidence 36999999999999999999999999999999999998776 999999998775432 235799999999999
Q ss_pred CCCCHHHHHHHhhhccCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhccCcchhHHHHHHHHHhCCcccccccccC
Q 000997 222 AEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGD 301 (1194)
Q Consensus 222 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~k~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 301 (1194)
+.+||+||+.+.....+.. . .+....++++++.+||++..++.+
T Consensus 91 ~~~t~~~~l~~~~~~~~~~--~--------------------------------~~~~~~~~~~l~~~~l~~~~~~~~-- 134 (214)
T cd03292 91 PDRNVYENVAFALEVTGVP--P--------------------------------REIRKRVPAALELVGLSHKHRALP-- 134 (214)
T ss_pred cCCcHHHHHHHHHHHcCCC--H--------------------------------HHHHHHHHHHHHHcCCHHHhhCCh--
Confidence 9999999998864332110 0 001123677889999988777655
Q ss_pred ccCCCCChhhhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEE
Q 000997 302 EMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILL 381 (1194)
Q Consensus 302 ~~~~~LSGGqkqRvsia~al~~~~~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL 381 (1194)
..|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++.+. +++|+.++|..+++.+++|++++|
T Consensus 135 ---~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~--~~tiiivtH~~~~~~~~~d~i~~l 209 (214)
T cd03292 135 ---AELSGGEQQRVAIARAIVNSPTILIADEPTGNLDPDTTWEIMNLLKKINKA--GTTVVVATHAKELVDTTRHRVIAL 209 (214)
T ss_pred ---hhcCHHHHHHHHHHHHHHcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHc--CCEEEEEeCCHHHHHHhCCEEEEE
Confidence 469999999999999999999999999999999999999999999998653 455666788889999999999999
Q ss_pred cCCeE
Q 000997 382 SEGQI 386 (1194)
Q Consensus 382 ~~G~i 386 (1194)
++|++
T Consensus 210 ~~G~~ 214 (214)
T cd03292 210 ERGKL 214 (214)
T ss_pred eCCcC
Confidence 99974
No 344
>PRK14273 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.3e-34 Score=319.56 Aligned_cols=206 Identities=23% Similarity=0.303 Sum_probs=166.3
Q ss_pred eeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCC--CceeeEEEECCccCCCC-----CCCceEEEEecCCCCC
Q 000997 149 TILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHH--LQVSGKITYNGHGFKEF-----VPPRTSAYVSQQDWQV 221 (1194)
Q Consensus 149 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~--~~~~G~i~~~G~~~~~~-----~~~~~~~yv~Q~d~~~ 221 (1194)
.+|+|+|++|++||+++|+|||||||||||++|+|.+++. .+.+|+|.++|.++... ..++.++|++|++..+
T Consensus 21 ~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~i~~v~q~~~~~ 100 (254)
T PRK14273 21 KALNNINIKILKNSITALIGPSGCGKSTFLRTLNRMNDLVEGIKIEGNVIYEGKNIYSNNFDILELRRKIGMVFQTPNPF 100 (254)
T ss_pred eeecceeeEEcCCCEEEEECCCCCCHHHHHHHHhccccCCcCCCCceEEEECCEecccccccHHHHhhceEEEeeccccc
Confidence 5899999999999999999999999999999999998752 12489999999876421 1246799999998877
Q ss_pred CCCCHHHHHHHhhhccCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhccCcchhHHHHHHHHHhCCc----ccccc
Q 000997 222 AEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLD----TCADT 297 (1194)
Q Consensus 222 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~k~~~~~~~~~~~~~~~~l~~lgL~----~~~dt 297 (1194)
+ +||+||+.|+....+.... ......++.+++.+||. +..++
T Consensus 101 ~-~tv~eni~~~~~~~~~~~~---------------------------------~~~~~~~~~~l~~~~l~~~l~~~~~~ 146 (254)
T PRK14273 101 L-MSIYDNISYGPKIHGTKDK---------------------------------KKLDEIVEQSLKKSALWNEVKDKLNT 146 (254)
T ss_pred c-CcHHHHHHHHHHhcCCCCH---------------------------------HHHHHHHHHHHHHhCCchhhHHHHhC
Confidence 4 8999999886432211000 00112356677777773 34455
Q ss_pred cccCccCCCCChhhhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCe
Q 000997 298 LVGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDD 377 (1194)
Q Consensus 298 ~vg~~~~~~LSGGqkqRvsia~al~~~~~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~ 377 (1194)
. .+.|||||||||+|||||+.+|++|+|||||+|||+.++..+.+.|+++++ + ++++.++|+.+++.+++|+
T Consensus 147 ~-----~~~LSgG~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~--~-~tvii~sH~~~~~~~~~d~ 218 (254)
T PRK14273 147 N-----ALSLSGGQQQRLCIARTLAIEPNVILMDEPTSALDPISTGKIEELIINLKE--S-YTIIIVTHNMQQAGRISDR 218 (254)
T ss_pred C-----cccCCHHHHHHHHHHHHHHcCCCEEEEeCCCcccCHHHHHHHHHHHHHHhc--C-CEEEEEeCCHHHHHHhCCE
Confidence 4 356999999999999999999999999999999999999999999999853 3 5566688888999999999
Q ss_pred EEEEcCCeEEEecChhhHH
Q 000997 378 VILLSEGQIVYQGPRVSVL 396 (1194)
Q Consensus 378 vilL~~G~iv~~G~~~~~~ 396 (1194)
|++|++|+++..|+.+++.
T Consensus 219 i~~l~~G~i~~~g~~~~~~ 237 (254)
T PRK14273 219 TAFFLNGCIEEESSTDELF 237 (254)
T ss_pred EEEEECCEEEEeCCHHHHH
Confidence 9999999999999988764
No 345
>COG4525 TauB ABC-type taurine transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.1e-34 Score=289.03 Aligned_cols=206 Identities=25% Similarity=0.343 Sum_probs=177.6
Q ss_pred eeeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCceeeEEEECCccCCCCCCCceEEEEecCCCCCCCCCHH
Q 000997 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVPPRTSAYVSQQDWQVAEMTVR 227 (1194)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lTV~ 227 (1194)
..+|+|||+.|.+||.++++||||||||||||+++|...|. .|+|.+||.+++.. ...-|.|+|++.++|-+||.
T Consensus 18 ~~~le~vsL~ia~ge~vv~lGpSGcGKTTLLnl~AGf~~P~---~G~i~l~~r~i~gP--gaergvVFQ~~~LlPWl~~~ 92 (259)
T COG4525 18 RSALEDVSLTIASGELVVVLGPSGCGKTTLLNLIAGFVTPS---RGSIQLNGRRIEGP--GAERGVVFQNEALLPWLNVI 92 (259)
T ss_pred hhhhhccceeecCCCEEEEEcCCCccHHHHHHHHhcCcCcc---cceEEECCEeccCC--CccceeEeccCccchhhHHH
Confidence 56999999999999999999999999999999999999886 99999999987643 33458999999999999999
Q ss_pred HHHHHhhhccCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhccCcchhHHHHHHHHHhCCcccccccccCccCCCC
Q 000997 228 ETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEMLKGI 307 (1194)
Q Consensus 228 E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~k~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~L 307 (1194)
+|++|+.+++|.++. .| ..++.+.+...||....+.. +-.|
T Consensus 93 dNvafgL~l~Gi~k~-------~R---------------------------~~~a~q~l~~VgL~~~~~~~-----i~qL 133 (259)
T COG4525 93 DNVAFGLQLRGIEKA-------QR---------------------------REIAHQMLALVGLEGAEHKY-----IWQL 133 (259)
T ss_pred HHHHHHHHhcCCCHH-------HH---------------------------HHHHHHHHHHhCcccccccc-----eEee
Confidence 999999998876431 11 23467788999999876654 4579
Q ss_pred ChhhhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEcC--Ce
Q 000997 308 SGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSE--GQ 385 (1194)
Q Consensus 308 SGGqkqRvsia~al~~~~~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~~--G~ 385 (1194)
||||||||.|||||..+|+.|+||||+.+||+-++.++.+.|-.+.+..++ .+..++|..+|+.-+++++++|+. |+
T Consensus 134 SGGmrQRvGiARALa~eP~~LlLDEPfgAlDa~tRe~mQelLldlw~~tgk-~~lliTH~ieEAlflatrLvvlsp~pgR 212 (259)
T COG4525 134 SGGMRQRVGIARALAVEPQLLLLDEPFGALDALTREQMQELLLDLWQETGK-QVLLITHDIEEALFLATRLVVLSPGPGR 212 (259)
T ss_pred cchHHHHHHHHHHhhcCcceEeecCchhhHHHHHHHHHHHHHHHHHHHhCC-eEEEEeccHHHHHhhhheeEEecCCCce
Confidence 999999999999999999999999999999999999999999988876654 455688999999999999999984 89
Q ss_pred EEEecChhhHHHH
Q 000997 386 IVYQGPRVSVLDF 398 (1194)
Q Consensus 386 iv~~G~~~~~~~~ 398 (1194)
|+..=|.+-...|
T Consensus 213 vv~~~~~df~rR~ 225 (259)
T COG4525 213 VVERLPLDFARRY 225 (259)
T ss_pred eeEecCCCHHHHh
Confidence 9988777654444
No 346
>PRK14236 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.5e-34 Score=322.08 Aligned_cols=219 Identities=25% Similarity=0.305 Sum_probs=173.8
Q ss_pred eeEeecceeeeecccccccccccccceEEeeeeeEEEeCCcEEEEEccCCCChHHHHhhhcCCCCC---CeeEEEEEEcC
Q 000997 816 SMAFGNINYFVDVPVELKQEGVLEDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTG---GIIEGDIYISG 892 (1194)
Q Consensus 816 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~---~~~~G~i~i~g 892 (1194)
.+.++|+++.+ +++.+|+|+||+|++||+++|+||||||||||+++|+|.... .+.+|+|.++|
T Consensus 25 ~l~~~nl~~~~-------------~~~~il~~vs~~i~~Ge~~~I~G~nGsGKSTLl~~laGl~~~~~~~~~~G~i~i~g 91 (272)
T PRK14236 25 ALEVRNLNLFY-------------GDKQALFDISMRIPKNRVTAFIGPSGCGKSTLLRCFNRMNDLVDNCRIEGEIRLDG 91 (272)
T ss_pred EEEEEEEEEEE-------------CCeeEeeeEEEEEcCCCEEEEECCCCCCHHHHHHHHHhcCCCccCCCCceEEEECC
Confidence 46677776654 235699999999999999999999999999999999998542 13689999999
Q ss_pred ccCCh-----hcccceeeEeecCCCCCCCCcHHHHHHHHhhhcCCCcCcHHHHHHHHHHHHHHcCCCcccCCcccCCCCC
Q 000997 893 YPKRQ-----ETFARISGYCEQNDIHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGIN 967 (1194)
Q Consensus 893 ~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~ 967 (1194)
.++.. ..+++.++|++|++.+++. |++||+.+....... ......++.++++++.+++.+....... ..+.
T Consensus 92 ~~i~~~~~~~~~~~~~i~~v~q~~~l~~~-tv~enl~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~~~~~~~-~~~~ 167 (272)
T PRK14236 92 QNIYDKKVDVAELRRRVGMVFQRPNPFPK-SIYENVVYGLRLQGI--NNRRVLDEAVERSLRGAALWDEVKDRLH-ENAF 167 (272)
T ss_pred EECcccccCHHHHhccEEEEecCCccCcc-cHHHHHHHHHHhcCC--CcHHHHHHHHHHHHHHcCCChhHHHHhh-CCcc
Confidence 87642 2346789999999888876 999999876543211 1122233557788888888532111111 1235
Q ss_pred CCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCeEEEEccCcE
Q 000997 968 GLSTEQRKRLTIAVELVANPSIVFMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGE 1047 (1194)
Q Consensus 968 ~LSgGqrqrl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~ 1047 (1194)
.||||||||++|||+|+.+|+||+|||||+|||+.++..+++.|+++++ +.|||++||+++ ++.+.+|++++|+ +|+
T Consensus 168 ~LS~Gq~qrv~laral~~~p~lllLDEPt~gLD~~~~~~l~~~L~~~~~-~~tiiivtH~~~-~~~~~~d~i~~l~-~G~ 244 (272)
T PRK14236 168 GLSGGQQQRLVIARAIAIEPEVLLLDEPTSALDPISTLKIEELITELKS-KYTIVIVTHNMQ-QAARVSDYTAFMY-MGK 244 (272)
T ss_pred cCCHHHHHHHHHHHHHHCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHh-CCeEEEEeCCHH-HHHhhCCEEEEEE-CCE
Confidence 8999999999999999999999999999999999999999999999975 799999999986 4667899999998 479
Q ss_pred EEEeCCC
Q 000997 1048 LIYAGPL 1054 (1194)
Q Consensus 1048 ~~~~g~~ 1054 (1194)
++..|+.
T Consensus 245 i~~~g~~ 251 (272)
T PRK14236 245 LVEYGDT 251 (272)
T ss_pred EEecCCH
Confidence 9998875
No 347
>TIGR03005 ectoine_ehuA ectoine/hydroxyectoine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of a conserved four gene ABC transporter operon found next to ectoine unilization operons and ectoine biosynthesis operons. Ectoine is a compatible solute that protects enzymes from high osmolarity. It is released by some species in response to hypoosmotic shock, and it is taken up by a number of bacteria as a compatible solute or for consumption. This family shows strong sequence similiarity to a number of amino acid ABC transporter ATP-binding proteins.
Probab=100.00 E-value=2.6e-34 Score=320.09 Aligned_cols=206 Identities=23% Similarity=0.316 Sum_probs=171.4
Q ss_pred eeeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCceeeEEEECCccCCCCC----------------CCceE
Q 000997 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV----------------PPRTS 211 (1194)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~~----------------~~~~~ 211 (1194)
.++|+|+|++|++|++++|+||||||||||+++|+|.+.+. +|+|.++|.++.... .++.+
T Consensus 13 ~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~i 89 (252)
T TIGR03005 13 LTVLDGLNFSVAAGEKVALIGPSGSGKSTILRILMTLEPID---EGQIQVEGEQLYHMPGRNGPLVPADEKHLRQMRNKI 89 (252)
T ss_pred eeEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEEccccccccccccccchhHHHHHhhCe
Confidence 36999999999999999999999999999999999998776 999999998764321 24579
Q ss_pred EEEecCCCCCCCCCHHHHHHHhhhc-cCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhccCcchhHHHHHHHHHhC
Q 000997 212 AYVSQQDWQVAEMTVRETLDFAGQC-QGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILG 290 (1194)
Q Consensus 212 ~yv~Q~d~~~~~lTV~E~l~f~~~~-~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~k~~~~~~~~~~~~~~~~l~~lg 290 (1194)
+|++|++.+++.+||.||+.++... .+.. . ......++++++.+|
T Consensus 90 ~~v~q~~~~~~~~tv~~nl~~~~~~~~~~~--------------------~--------------~~~~~~~~~~l~~~g 135 (252)
T TIGR03005 90 GMVFQSFNLFPHKTVLDNVTEAPVLVLGMA--------------------R--------------AEAEKRAMELLDMVG 135 (252)
T ss_pred EEEecCcccCCCCcHHHHHHHHHHHhcCCC--------------------H--------------HHHHHHHHHHHHHcC
Confidence 9999999989999999999875321 1000 0 001123677889999
Q ss_pred CcccccccccCccCCCCChhhhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhH
Q 000997 291 LDTCADTLVGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPE 370 (1194)
Q Consensus 291 L~~~~dt~vg~~~~~~LSGGqkqRvsia~al~~~~~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~ 370 (1194)
|++..+..+ ..|||||||||+||+||+.+|++++|||||+|||+.+...+.+.|+++.+.. +++++.++|..++
T Consensus 136 l~~~~~~~~-----~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~-~~tiiivsH~~~~ 209 (252)
T TIGR03005 136 LADKADHMP-----AQLSGGQQQRVAIARALAMRPKVMLFDEVTSALDPELVGEVLNVIRRLASEH-DLTMLLVTHEMGF 209 (252)
T ss_pred ChhHhhcCh-----hhcCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhc-CcEEEEEeCCHHH
Confidence 987666544 4699999999999999999999999999999999999999999999987532 4566668888899
Q ss_pred HHhhcCeEEEEcCCeEEEecChhhHH
Q 000997 371 AYELFDDVILLSEGQIVYQGPRVSVL 396 (1194)
Q Consensus 371 ~~~~~D~vilL~~G~iv~~G~~~~~~ 396 (1194)
+..++|++++|++|++++.|+.+++.
T Consensus 210 ~~~~~d~i~~l~~G~i~~~g~~~~~~ 235 (252)
T TIGR03005 210 AREFADRVCFFDKGRIVEQGKPDEIF 235 (252)
T ss_pred HHHhcCEEEEEECCEEEEeCCHHHHh
Confidence 99999999999999999999887663
No 348
>PRK13641 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1e-34 Score=328.62 Aligned_cols=205 Identities=24% Similarity=0.321 Sum_probs=169.6
Q ss_pred eeeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCceeeEEEECCccCCCCC-------CCceEEEEecCCC-
Q 000997 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV-------PPRTSAYVSQQDW- 219 (1194)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~~-------~~~~~~yv~Q~d~- 219 (1194)
+.+|+|+|+++++||+++|+|||||||||||++|+|.++|+ +|+|.++|.++.... .++.++|++|++.
T Consensus 20 ~~~l~~vsl~i~~Ge~~~iiG~NGaGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~~~~~ig~v~q~~~~ 96 (287)
T PRK13641 20 KKGLDNISFELEEGSFVALVGHTGSGKSTLMQHFNALLKPS---SGTITIAGYHITPETGNKNLKKLRKKVSLVFQFPEA 96 (287)
T ss_pred ccceeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CcEEEECCEECccccccchHHHHHhceEEEEeChhh
Confidence 45999999999999999999999999999999999999876 999999998775321 1357999999962
Q ss_pred CCCCCCHHHHHHHhhhccCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhccCcchhHHHHHHHHHhCCc-cccccc
Q 000997 220 QVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLD-TCADTL 298 (1194)
Q Consensus 220 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~k~~~~~~~~~~~~~~~~l~~lgL~-~~~dt~ 298 (1194)
.+..+||.||+.|+....+... .+...+++++++.+||. ...++.
T Consensus 97 ~~~~~tv~e~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~gL~~~~~~~~ 142 (287)
T PRK13641 97 QLFENTVLKDVEFGPKNFGFSE----------------------------------DEAKEKALKWLKKVGLSEDLISKS 142 (287)
T ss_pred hhccchHHHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCCChhHhhCC
Confidence 3446899999988643221100 00122467889999996 455665
Q ss_pred ccCccCCCCChhhhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeE
Q 000997 299 VGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDV 378 (1194)
Q Consensus 299 vg~~~~~~LSGGqkqRvsia~al~~~~~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~v 378 (1194)
+ +.|||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|+++.+ .+++|+.++|+.+++.++||+|
T Consensus 143 ~-----~~LSgGq~qrl~laral~~~p~lLlLDEPt~gLD~~~~~~l~~~l~~l~~--~g~tvlivsH~~~~~~~~~d~v 215 (287)
T PRK13641 143 P-----FELSGGQMRRVAIAGVMAYEPEILCLDEPAAGLDPEGRKEMMQLFKDYQK--AGHTVILVTHNMDDVAEYADDV 215 (287)
T ss_pred c-----ccCCHHHHHHHHHHHHHHcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHh--CCCEEEEEeCCHHHHHHhCCEE
Confidence 5 46999999999999999999999999999999999999999999999864 2566677889999999999999
Q ss_pred EEEcCCeEEEecChhhHH
Q 000997 379 ILLSEGQIVYQGPRVSVL 396 (1194)
Q Consensus 379 ilL~~G~iv~~G~~~~~~ 396 (1194)
++|++|++++.|+.+++.
T Consensus 216 ~~l~~G~i~~~g~~~~~~ 233 (287)
T PRK13641 216 LVLEHGKLIKHASPKEIF 233 (287)
T ss_pred EEEECCEEEEeCCHHHHh
Confidence 999999999999988764
No 349
>PRK13648 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.7e-34 Score=322.66 Aligned_cols=204 Identities=25% Similarity=0.319 Sum_probs=168.4
Q ss_pred eeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCceeeEEEECCccCCCCC---CCceEEEEecCCC-CCCCC
Q 000997 149 TILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV---PPRTSAYVSQQDW-QVAEM 224 (1194)
Q Consensus 149 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~~---~~~~~~yv~Q~d~-~~~~l 224 (1194)
.+|+|+|++|++|++++|+||||||||||+++|+|.+++. +|+|.++|.++.... .++.++|++|++. +++..
T Consensus 23 ~~l~~isl~i~~Ge~~~I~G~nGsGKSTLl~~i~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~~~~~~~ 99 (269)
T PRK13648 23 FTLKDVSFNIPKGQWTSIVGHNGSGKSTIAKLMIGIEKVK---SGEIFYNNQAITDDNFEKLRKHIGIVFQNPDNQFVGS 99 (269)
T ss_pred cceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---ceEEEECCEECCcCCHHHHHhheeEEEeChHHhcccc
Confidence 5899999999999999999999999999999999998876 999999998875432 2457999999975 67888
Q ss_pred CHHHHHHHhhhccCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhccCcchhHHHHHHHHHhCCcccccccccCccC
Q 000997 225 TVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEML 304 (1194)
Q Consensus 225 TV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~k~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~ 304 (1194)
|+++|+.|.....+.. . ......++.+++.+||.+..++.+
T Consensus 100 ~v~~~~~~~~~~~~~~--~--------------------------------~~~~~~~~~~l~~~~l~~~~~~~~----- 140 (269)
T PRK13648 100 IVKYDVAFGLENHAVP--Y--------------------------------DEMHRRVSEALKQVDMLERADYEP----- 140 (269)
T ss_pred cHHHHHHhhHHhcCCC--H--------------------------------HHHHHHHHHHHHHcCCchhhhCCc-----
Confidence 9999998864322110 0 001123677899999987776654
Q ss_pred CCCChhhhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEcCC
Q 000997 305 KGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEG 384 (1194)
Q Consensus 305 ~~LSGGqkqRvsia~al~~~~~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~~G 384 (1194)
+.|||||||||+||+|++.+|++++|||||+|||+.++..+.+.|+++++.. +++|+.++|...++.. +|+|++|++|
T Consensus 141 ~~LS~G~~qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~-~~tiiivtH~~~~~~~-~d~i~~l~~G 218 (269)
T PRK13648 141 NALSGGQKQRVAIAGVLALNPSVIILDEATSMLDPDARQNLLDLVRKVKSEH-NITIISITHDLSEAME-ADHVIVMNKG 218 (269)
T ss_pred ccCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhc-CCEEEEEecCchHHhc-CCEEEEEECC
Confidence 4699999999999999999999999999999999999999999999986533 3455557777777765 9999999999
Q ss_pred eEEEecChhhHH
Q 000997 385 QIVYQGPRVSVL 396 (1194)
Q Consensus 385 ~iv~~G~~~~~~ 396 (1194)
++++.|+.+++.
T Consensus 219 ~i~~~g~~~~~~ 230 (269)
T PRK13648 219 TVYKEGTPTEIF 230 (269)
T ss_pred EEEEecCHHHHh
Confidence 999999988764
No 350
>PRK14263 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.2e-34 Score=321.35 Aligned_cols=207 Identities=22% Similarity=0.259 Sum_probs=168.9
Q ss_pred cceEEeeeeeEEEeCCcEEEEEccCCCChHHHHhhhcCCCCCC---eeEEEEEEcCccCCh-----hcccceeeEeecCC
Q 000997 840 DRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGG---IIEGDIYISGYPKRQ-----ETFARISGYCEQND 911 (1194)
Q Consensus 840 ~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~---~~~G~i~i~g~~~~~-----~~~~~~~gyv~Q~~ 911 (1194)
+++.+|+|+||+++|||++||+|+||||||||+++|+|...+. +.+|+|.++|.++.. ..+++.++|++|++
T Consensus 19 ~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~i~~v~q~~ 98 (261)
T PRK14263 19 GNFMAVRDSHVPIRKNEITGFIGPSGCGKSTVLRSLNRMNDLVKGFRFEGHVHFLGQDVYGKGVDPVVVRRYIGMVFQQP 98 (261)
T ss_pred CCEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHcccccccCCCCceEEEECCEeccccccchHhhhhceEEEecCC
Confidence 4567999999999999999999999999999999999986421 258999999987632 23456799999998
Q ss_pred CCCCCCcHHHHHHHHhhhcCCCcCcHHHHHHHHHHHHHHcCCCcccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCEEE
Q 000997 912 IHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVF 991 (1194)
Q Consensus 912 ~~~~~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~ill 991 (1194)
.++ .+|+.||+.+....+. . .....+.++++++.+++.+..+.... ..+..||||||||++|||||+.+|++|+
T Consensus 99 ~~~-~~tv~enl~~~~~~~~---~-~~~~~~~~~~~l~~~~l~~~i~~~~~-~~~~~LS~G~~qrv~laral~~~p~lll 172 (261)
T PRK14263 99 NPF-SMSIFDNVAFGLRLNR---Y-KGDLGDRVKHALQGAALWDEVKDKLK-VSGLSLSGGQQQRLCIARAIATEPEVLL 172 (261)
T ss_pred ccc-cccHHHHHHHHHhhcC---c-hHHHHHHHHHHHHHcCCchhhhhhhh-CCcccCCHHHHHHHHHHHHHHcCCCEEE
Confidence 877 5999999998754332 1 12234567888999888543222211 1246899999999999999999999999
Q ss_pred EeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCeEEEEc-------cCcEEEEeCCC
Q 000997 992 MDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMK-------RGGELIYAGPL 1054 (1194)
Q Consensus 992 LDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~~d~~~~l~-------~gG~~~~~g~~ 1054 (1194)
|||||+|||+.++..+.+.|+++. +++|||+++|+++ ++.+.+|++++|+ ++|+++..|+.
T Consensus 173 lDEPtsgLD~~~~~~l~~~l~~~~-~~~tii~isH~~~-~i~~~~d~v~~l~~~~~~~~~~G~i~~~g~~ 240 (261)
T PRK14263 173 LDEPCSALDPIATRRVEELMVELK-KDYTIALVTHNMQ-QAIRVADTTAFFSVDISQGTRTGYLVEMGPT 240 (261)
T ss_pred EeCCCccCCHHHHHHHHHHHHHHh-cCCeEEEEeCCHH-HHHHhCCEEEEEecccccccCCceEEEeCCH
Confidence 999999999999999999999985 4799999999986 4678899999996 36899999875
No 351
>PRK14272 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.6e-34 Score=320.25 Aligned_cols=204 Identities=26% Similarity=0.319 Sum_probs=165.2
Q ss_pred ceEEeeeeeEEEeCCcEEEEEccCCCChHHHHhhhcCCCCCCe---eEEEEEEcCccCCh-----hcccceeeEeecCCC
Q 000997 841 RLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGI---IEGDIYISGYPKRQ-----ETFARISGYCEQNDI 912 (1194)
Q Consensus 841 ~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~---~~G~i~i~g~~~~~-----~~~~~~~gyv~Q~~~ 912 (1194)
++.+|+|+||++++||++||+||||||||||+++|+|..++.+ .+|+|.++|.++.. ..+++.++|++|++.
T Consensus 16 ~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~~ 95 (252)
T PRK14272 16 DKQAVKNVNLDVQRGTVNALIGPSGCGKTTFLRAINRMHDLTPGARVTGRILLDGQDIYGPRVDPVAMRRRVGMVFQKPN 95 (252)
T ss_pred CEEeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCcCCCCceeEEECCEEcccCccCHHHhhceeEEEeccCc
Confidence 4579999999999999999999999999999999999865322 37999999987632 234567999999999
Q ss_pred CCCCCcHHHHHHHHhhhcCCCcCcHHHHHHHHHHHHHHcCCCc----ccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCC
Q 000997 913 HSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTS----LSGALIGLPGINGLSTEQRKRLTIAVELVANPS 988 (1194)
Q Consensus 913 ~~~~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~----~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~ 988 (1194)
+++.+|+.||+.+....... ...+...+.++++++.+++.. ..+. .+..||||||||++||++|+.+|+
T Consensus 96 ~~~~~t~~enl~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~l~~~~~~-----~~~~LS~G~~qrv~laral~~~p~ 168 (252)
T PRK14272 96 PFPTMSVFDNVVAGLKLAGI--RDRDHLMEVAERSLRGAALWDEVKDRLKT-----PATGLSGGQQQRLCIARALAVEPE 168 (252)
T ss_pred cCcCCCHHHHHHHHHHhcCC--CCHHHHHHHHHHHHHHcCcchhhhhhhcC-----CcccCCHHHHHHHHHHHHHhcCCC
Confidence 99999999999876432211 112223345566666666542 2222 246899999999999999999999
Q ss_pred EEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCeEEEEccCcEEEEeCCC
Q 000997 989 IVFMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1194)
Q Consensus 989 illLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~ 1054 (1194)
||+|||||+|||+.++..+.+.|+++++ ++|||+++|+++ .+.+.+|++++|++ |++++.|+.
T Consensus 169 llllDEP~~~LD~~~~~~l~~~l~~~~~-~~tiii~sH~~~-~~~~~~d~i~~l~~-G~i~~~~~~ 231 (252)
T PRK14272 169 ILLMDEPTSALDPASTARIEDLMTDLKK-VTTIIIVTHNMH-QAARVSDTTSFFLV-GDLVEHGPT 231 (252)
T ss_pred EEEEeCCCccCCHHHHHHHHHHHHHHhc-CCeEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEeCCH
Confidence 9999999999999999999999999864 799999999986 46678999999985 789988875
No 352
>cd03220 ABC_KpsT_Wzt ABC_KpsT_Wzt The KpsT/Wzt ABC transporter subfamily is involved in extracellular polysaccharide export. Among the variety of membrane-linked or extracellular polysaccharides excreted by bacteria, only capsular polysaccharides, lipopolysaccharides, and teichoic acids have been shown to be exported by ABC transporters. A typical system is made of a conserved integral membrane and an ABC. In addition to these proteins, capsular polysaccharide exporter systems require two 'accessory' proteins to perform their function: a periplasmic (E.coli) or a lipid-anchored outer membrane protein called OMA (Neisseria meningitidis and Haemophilus influenzae) and a cytoplasmic membrane protein MPA2.
Probab=100.00 E-value=2.7e-34 Score=313.62 Aligned_cols=198 Identities=24% Similarity=0.331 Sum_probs=162.4
Q ss_pred cccccccceEEeeeeeEEEeCCcEEEEEccCCCChHHHHhhhcCCCCCCeeEEEEEEcCccCChhcccceeeEeecCCCC
Q 000997 834 QEGVLEDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQETFARISGYCEQNDIH 913 (1194)
Q Consensus 834 ~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~~~~~~~gyv~Q~~~~ 913 (1194)
+....++++.+|+|+||++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+... ..+...+
T Consensus 27 ~~~~~~~~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--p~~G~i~~~g~~~~~---------~~~~~~~ 95 (224)
T cd03220 27 GRKGEVGEFWALKDVSFEVPRGERIGLIGRNGAGKSTLLRLLAGIYP--PDSGTVTVRGRVSSL---------LGLGGGF 95 (224)
T ss_pred hhhhhcCCeEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEEchh---------hcccccC
Confidence 33445667889999999999999999999999999999999999876 568999999976421 1112334
Q ss_pred CCCCcHHHHHHHHhhhcCCCcCcHHHHHHHHHHHHHHcCCCcccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEe
Q 000997 914 SPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMD 993 (1194)
Q Consensus 914 ~~~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illLD 993 (1194)
.+.+||+||+.+....+. .......+.++++++.+++.+..+..+ ..||||||||++|||+|+.+|++|+||
T Consensus 96 ~~~~tv~enl~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSgG~~qrv~laral~~~p~llllD 167 (224)
T cd03220 96 NPELTGRENIYLNGRLLG---LSRKEIDEKIDEIIEFSELGDFIDLPV-----KTYSSGMKARLAFAIATALEPDILLID 167 (224)
T ss_pred CCCCcHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCChhhhhCCh-----hhCCHHHHHHHHHHHHHhcCCCEEEEe
Confidence 577999999988654321 122334456788899999987766643 579999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCeEEEEccCcEEEEeC
Q 000997 994 EPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAG 1052 (1194)
Q Consensus 994 EPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g 1052 (1194)
|||+|||+.++..+.+.|++++++|.|||+++|+++ ++.+.+|++++|. +|++++.|
T Consensus 168 EP~~gLD~~~~~~~~~~l~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~-~G~i~~~g 224 (224)
T cd03220 168 EVLAVGDAAFQEKCQRRLRELLKQGKTVILVSHDPS-SIKRLCDRALVLE-KGKIRFDG 224 (224)
T ss_pred CCcccCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHH-HHHHhCCEEEEEE-CCEEEecC
Confidence 999999999999999999999777899999999976 4667799999998 57887654
No 353
>PRK10418 nikD nickel transporter ATP-binding protein NikD; Provisional
Probab=100.00 E-value=3e-34 Score=319.72 Aligned_cols=201 Identities=22% Similarity=0.254 Sum_probs=164.6
Q ss_pred eEEeeeeeEEEeCCcEEEEEccCCCChHHHHhhhcCCCCC--CeeEEEEEEcCccCChhcc-cceeeEeecCCC--CCCC
Q 000997 842 LQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTG--GIIEGDIYISGYPKRQETF-ARISGYCEQNDI--HSPG 916 (1194)
Q Consensus 842 ~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~--~~~~G~i~i~g~~~~~~~~-~~~~gyv~Q~~~--~~~~ 916 (1194)
+.+|+|+|+++++||+++|+|+||||||||+++|+|..++ .+.+|+|.++|.++..... ++.++||+|++. +.+.
T Consensus 16 ~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~~~G~i~~~g~~i~~~~~~~~~i~~v~q~~~~~~~~~ 95 (254)
T PRK10418 16 QPLVHGVSLTLQRGRVLALVGGSGSGKSLTCAAALGILPAGVRQTAGRVLLDGKPVAPCALRGRKIATIMQNPRSAFNPL 95 (254)
T ss_pred cceecceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCCcCCEEEECCeeccccccccceEEEEecCCccccCcc
Confidence 3589999999999999999999999999999999998653 1168999999987643322 357999999974 4466
Q ss_pred CcHHHHHHHHhhhcCCCcCcHHHHHHHHHHHHHHcCCCcc---cCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEe
Q 000997 917 LTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSL---SGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMD 993 (1194)
Q Consensus 917 lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~---~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illLD 993 (1194)
.|+.+++.+.+..... .. ..+.++++++.+++.+. .+.. +..|||||||||+|||||+.+|+|||||
T Consensus 96 ~~~~~~~~~~~~~~~~---~~--~~~~~~~~l~~~~l~~~~~~~~~~-----~~~LS~Gq~qrv~laral~~~p~lLlLD 165 (254)
T PRK10418 96 HTMHTHARETCLALGK---PA--DDATLTAALEAVGLENAARVLKLY-----PFEMSGGMLQRMMIALALLCEAPFIIAD 165 (254)
T ss_pred ccHHHHHHHHHHHcCC---Ch--HHHHHHHHHHHcCCCChhhhhhcC-----CcccCHHHHHHHHHHHHHhcCCCEEEEe
Confidence 8999998765432211 11 22567889999998752 3332 3589999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCeEEEEccCcEEEEeCCC
Q 000997 994 EPTSGLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1194)
Q Consensus 994 EPTsgLD~~~~~~i~~~l~~l~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~ 1054 (1194)
|||+|||+.++..+.+.|++++++ |+|||+++|+++ ++.+.+|++++|+ +|+++..|+.
T Consensus 166 EPt~~LD~~~~~~l~~~L~~~~~~~g~til~~sH~~~-~~~~~~d~v~~l~-~G~i~~~~~~ 225 (254)
T PRK10418 166 EPTTDLDVVAQARILDLLESIVQKRALGMLLVTHDMG-VVARLADDVAVMS-HGRIVEQGDV 225 (254)
T ss_pred CCCcccCHHHHHHHHHHHHHHHHhcCcEEEEEecCHH-HHHHhCCEEEEEE-CCEEEEecCH
Confidence 999999999999999999999764 899999999976 4667899999998 5789998875
No 354
>PRK10584 putative ABC transporter ATP-binding protein YbbA; Provisional
Probab=100.00 E-value=3.9e-34 Score=313.89 Aligned_cols=198 Identities=26% Similarity=0.363 Sum_probs=163.0
Q ss_pred eeeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCceeeEEEECCccCCCCCC-------CceEEEEecCCCC
Q 000997 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVP-------PRTSAYVSQQDWQ 220 (1194)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~~~-------~~~~~yv~Q~d~~ 220 (1194)
.++|+|+|+++++|++++|+||||||||||+++|+|.+++. +|+|.++|.++..... ++.++|++|++.+
T Consensus 23 ~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~~~~~i~~~~q~~~l 99 (228)
T PRK10584 23 LSILTGVELVVKRGETIALIGESGSGKSTLLAILAGLDDGS---SGEVSLVGQPLHQMDEEARAKLRAKHVGFVFQSFML 99 (228)
T ss_pred eEEEeccEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCCCC---CeeEEECCEEcccCCHHHHHHHHhheEEEEEccccc
Confidence 35999999999999999999999999999999999998776 9999999988765422 2469999999988
Q ss_pred CCCCCHHHHHHHhhhccCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhccCcchhHHHHHHHHHhCCccccccccc
Q 000997 221 VAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVG 300 (1194)
Q Consensus 221 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~k~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg 300 (1194)
++.+||.||+.+.....+... .+....++.+++.+||.+..+..++
T Consensus 100 ~~~~tv~~~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~~ 145 (228)
T PRK10584 100 IPTLNALENVELPALLRGESS----------------------------------RQSRNGAKALLEQLGLGKRLDHLPA 145 (228)
T ss_pred CCCcCHHHHHHHHHHhcCCCH----------------------------------HHHHHHHHHHHHHcCCHhHhhCChh
Confidence 999999999987543221000 0012246788999999877766554
Q ss_pred CccCCCCChhhhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEE
Q 000997 301 DEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVIL 380 (1194)
Q Consensus 301 ~~~~~~LSGGqkqRvsia~al~~~~~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vil 380 (1194)
.|||||||||+||+||+.+|++|+|||||+|||+.+...+.+.|++++...+ ++|+.++|+.+++ +.+|++++
T Consensus 146 -----~LS~Ge~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~-~tii~~sH~~~~~-~~~d~i~~ 218 (228)
T PRK10584 146 -----QLSGGEQQRVALARAFNGRPDVLFADEPTGNLDRQTGDKIADLLFSLNREHG-TTLILVTHDLQLA-ARCDRRLR 218 (228)
T ss_pred -----hCCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcC-CEEEEEecCHHHH-HhCCEEEE
Confidence 6999999999999999999999999999999999999999999999865434 4555577777776 55999999
Q ss_pred EcCCeEEEe
Q 000997 381 LSEGQIVYQ 389 (1194)
Q Consensus 381 L~~G~iv~~ 389 (1194)
|++|++++.
T Consensus 219 l~~g~i~~~ 227 (228)
T PRK10584 219 LVNGQLQEE 227 (228)
T ss_pred EECCEEEec
Confidence 999999753
No 355
>PRK13652 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.1e-34 Score=323.23 Aligned_cols=205 Identities=24% Similarity=0.358 Sum_probs=171.2
Q ss_pred eeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCceeeEEEECCccCCCCC---CCceEEEEecCCC-CCCCC
Q 000997 149 TILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV---PPRTSAYVSQQDW-QVAEM 224 (1194)
Q Consensus 149 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~~---~~~~~~yv~Q~d~-~~~~l 224 (1194)
.+|+|+|++|++||+++|+||||||||||+++|+|.++|. +|+|.++|.++.... .++.++|++|++. .+...
T Consensus 18 ~~l~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~~~~~~~ 94 (277)
T PRK13652 18 EALNNINFIAPRNSRIAVIGPNGAGKSTLFRHFNGILKPT---SGSVLIRGEPITKENIREVRKFVGLVFQNPDDQIFSP 94 (277)
T ss_pred ceeeEeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---ceEEEECCEECCcCCHHHHHhheEEEecCcccccccc
Confidence 4999999999999999999999999999999999999876 999999998775432 2356899999963 34568
Q ss_pred CHHHHHHHhhhccCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhccCcchhHHHHHHHHHhCCcccccccccCccC
Q 000997 225 TVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEML 304 (1194)
Q Consensus 225 TV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~k~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~ 304 (1194)
||.||+.+.....+... ......++.+++.+||.+..++.+.
T Consensus 95 tv~~~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~~---- 136 (277)
T PRK13652 95 TVEQDIAFGPINLGLDE----------------------------------ETVAHRVSSALHMLGLEELRDRVPH---- 136 (277)
T ss_pred cHHHHHHhHHHHcCCCH----------------------------------HHHHHHHHHHHHHCCChhHhcCCcc----
Confidence 99999987543221100 0012246788999999887777654
Q ss_pred CCCChhhhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEcCC
Q 000997 305 KGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEG 384 (1194)
Q Consensus 305 ~~LSGGqkqRvsia~al~~~~~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~~G 384 (1194)
.|||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|+++.+.. +++|+.++|..+++.+.+|+|++|++|
T Consensus 137 -~LS~Gq~qrl~laraL~~~p~llilDEPt~gLD~~~~~~l~~~l~~l~~~~-g~tvli~tH~~~~~~~~~drv~~l~~G 214 (277)
T PRK13652 137 -HLSGGEKKRVAIAGVIAMEPQVLVLDEPTAGLDPQGVKELIDFLNDLPETY-GMTVIFSTHQLDLVPEMADYIYVMDKG 214 (277)
T ss_pred -cCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhc-CCEEEEEecCHHHHHHhCCEEEEEECC
Confidence 699999999999999999999999999999999999999999999987643 456666888899999999999999999
Q ss_pred eEEEecChhhHH
Q 000997 385 QIVYQGPRVSVL 396 (1194)
Q Consensus 385 ~iv~~G~~~~~~ 396 (1194)
++++.|+++++.
T Consensus 215 ~i~~~g~~~~~~ 226 (277)
T PRK13652 215 RIVAYGTVEEIF 226 (277)
T ss_pred eEEEECCHHHHh
Confidence 999999988874
No 356
>PRK13543 cytochrome c biogenesis protein CcmA; Provisional
Probab=100.00 E-value=1.6e-34 Score=313.33 Aligned_cols=189 Identities=24% Similarity=0.309 Sum_probs=162.8
Q ss_pred ceEEeeeeeEEEeCCcEEEEEccCCCChHHHHhhhcCCCCCCeeEEEEEEcCccCChhcccceeeEeecCCCCCCCCcHH
Q 000997 841 RLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQETFARISGYCEQNDIHSPGLTVL 920 (1194)
Q Consensus 841 ~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~~~~~~~gyv~Q~~~~~~~lTv~ 920 (1194)
++.+++++||++++||+++|+|+||||||||+++|+|..+ +.+|+|.++|.++.....++.++|++|++.+++.+|++
T Consensus 23 ~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~--~~~G~i~~~g~~i~~~~~~~~i~~~~q~~~~~~~~t~~ 100 (214)
T PRK13543 23 EEPVFGPLDFHVDAGEALLVQGDNGAGKTTLLRVLAGLLH--VESGQIQIDGKTATRGDRSRFMAYLGHLPGLKADLSTL 100 (214)
T ss_pred CceeeecceEEECCCCEEEEEcCCCCCHHHHHHHHhCCCC--CCCeeEEECCEEccchhhhhceEEeecCcccccCCcHH
Confidence 3569999999999999999999999999999999999876 46899999998765433456789999999888889999
Q ss_pred HHHHHHhhhcCCCcCcHHHHHHHHHHHHHHcCCCcccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCC
Q 000997 921 ESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSGLD 1000 (1194)
Q Consensus 921 e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEPTsgLD 1000 (1194)
||+.+...++. .. ..+.++++++.+++.+..+..+ ..||+|||||++||++|+.+|++|+|||||+|||
T Consensus 101 e~l~~~~~~~~---~~---~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrv~laral~~~p~llllDEPt~~LD 169 (214)
T PRK13543 101 ENLHFLCGLHG---RR---AKQMPGSALAIVGLAGYEDTLV-----RQLSAGQKKRLALARLWLSPAPLWLLDEPYANLD 169 (214)
T ss_pred HHHHHHHHhcC---Cc---HHHHHHHHHHHcCChhhccCCh-----hhCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCC
Confidence 99988654321 11 2234678889999887666543 5799999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCeEEEEc
Q 000997 1001 ARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMK 1043 (1194)
Q Consensus 1001 ~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~~d~~~~l~ 1043 (1194)
+.++..+.+.|+++.++|.|||+++|+++ ++.+.+|+++++.
T Consensus 170 ~~~~~~l~~~l~~~~~~~~tiii~sH~~~-~~~~~~~~i~~l~ 211 (214)
T PRK13543 170 LEGITLVNRMISAHLRGGGAALVTTHGAY-AAPPVRTRMLTLE 211 (214)
T ss_pred HHHHHHHHHHHHHHHhCCCEEEEEecChh-hhhhhcceEEEEe
Confidence 99999999999999888999999999986 5778899999986
No 357
>PRK14249 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.6e-34 Score=319.90 Aligned_cols=207 Identities=23% Similarity=0.281 Sum_probs=165.2
Q ss_pred ceEEeeeeeEEEeCCcEEEEEccCCCChHHHHhhhcCCCCCC---eeEEEEEEcCccCCh-----hcccceeeEeecCCC
Q 000997 841 RLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGG---IIEGDIYISGYPKRQ-----ETFARISGYCEQNDI 912 (1194)
Q Consensus 841 ~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~---~~~G~i~i~g~~~~~-----~~~~~~~gyv~Q~~~ 912 (1194)
++.+|+|+|+++.+|+++||+||||||||||+++|+|..++. +.+|+|.++|.++.. ..+++.++|++|++.
T Consensus 16 ~~~il~~~s~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~~~~~~~~~~~~~~~i~~v~q~~~ 95 (251)
T PRK14249 16 KHQVLKNINMDFPERQITAIIGPSGCGKSTLLRALNRMNDIVSGARLEGAVLLDNENIYSPNLDVVNLRKRVGMVFQQPN 95 (251)
T ss_pred CeeEecceEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCccccCCcccEEEECCEEccccccChHHhhceEEEEecCCc
Confidence 356999999999999999999999999999999999986521 236999999987532 234677999999998
Q ss_pred CCCCCcHHHHHHHHhhhcCCCcCcHHHHHHHHHHHHHHcCCCcccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEE
Q 000997 913 HSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFM 992 (1194)
Q Consensus 913 ~~~~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illL 992 (1194)
+++. |++||+.+....+... ..+...+.++++++.+++.+....... ..+..||||||||++|||+|+.+|++|+|
T Consensus 96 ~~~~-tv~enl~~~~~~~~~~--~~~~~~~~~~~~l~~~~l~~~l~~~~~-~~~~~LS~Gq~qrv~laral~~~p~lllL 171 (251)
T PRK14249 96 PFPK-SIFDNVAFGPRMLGTT--AQSRLDEVVEKSLRQAALWDEVKDNLH-KSGLALSGGQQQRLCIARVLAIEPEVILM 171 (251)
T ss_pred cCcC-cHHHHHhhHHHhcCCC--hhhHHHHHHHHHHHHhCCchhhhhHhh-CCcccCCHHHHHHHHHHHHHhcCCCEEEE
Confidence 8875 9999999875433111 112223456777787777532111111 12468999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCeEEEEccCcEEEEeCCC
Q 000997 993 DEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1194)
Q Consensus 993 DEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~ 1054 (1194)
||||+|||+.++..+.+.|+++. +|.|||+++|+++ .+.+.+|++++|. +|++++.|+.
T Consensus 172 DEPt~~LD~~~~~~l~~~l~~~~-~~~tilivsh~~~-~~~~~~d~i~~l~-~G~i~~~~~~ 230 (251)
T PRK14249 172 DEPCSALDPVSTMRIEELMQELK-QNYTIAIVTHNMQ-QAARASDWTGFLL-TGDLVEYGRT 230 (251)
T ss_pred eCCCccCCHHHHHHHHHHHHHHh-cCCEEEEEeCCHH-HHHhhCCEEEEEe-CCeEEEeCCH
Confidence 99999999999999999999985 5899999999986 4667889999998 5789888875
No 358
>PRK14250 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.9e-34 Score=316.23 Aligned_cols=199 Identities=25% Similarity=0.378 Sum_probs=166.4
Q ss_pred eeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCceeeEEEECCccCCCCC---CCceEEEEecCCCCCCCCC
Q 000997 149 TILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV---PPRTSAYVSQQDWQVAEMT 225 (1194)
Q Consensus 149 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~~---~~~~~~yv~Q~d~~~~~lT 225 (1194)
.+|+|+|++|++|++++|+|||||||||||++|+|.++|. +|+|.++|.++.... .++.++|++|++.+++ .|
T Consensus 17 ~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~i~~~~q~~~~~~-~t 92 (241)
T PRK14250 17 EILKDISVKFEGGAIYTIVGPSGAGKSTLIKLINRLIDPT---EGSILIDGVDIKTIDVIDLRRKIGMVFQQPHLFE-GT 92 (241)
T ss_pred eeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEEhhhcChHHhhhcEEEEecCchhch-hh
Confidence 5999999999999999999999999999999999998776 999999998765432 2467999999988776 69
Q ss_pred HHHHHHHhhhccCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhccCcchhHHHHHHHHHhCCc-ccccccccCccC
Q 000997 226 VRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLD-TCADTLVGDEML 304 (1194)
Q Consensus 226 V~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~k~~~~~~~~~~~~~~~~l~~lgL~-~~~dt~vg~~~~ 304 (1194)
|+||+.+.....+ . ....++.+++.+||+ +..++. .
T Consensus 93 v~e~l~~~~~~~~--~------------------------------------~~~~~~~~l~~~~l~~~~~~~~-----~ 129 (241)
T PRK14250 93 VKDNIEYGPMLKG--E------------------------------------KNVDVEYYLSIVGLNKEYATRD-----V 129 (241)
T ss_pred HHHHHhcchhhcC--c------------------------------------HHHHHHHHHHHcCCCHHHhhCC-----c
Confidence 9999976432110 0 011356778889996 444543 3
Q ss_pred CCCChhhhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEcCC
Q 000997 305 KGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEG 384 (1194)
Q Consensus 305 ~~LSGGqkqRvsia~al~~~~~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~~G 384 (1194)
..|||||||||+||+|++.+|++++|||||+|||+.+...+.+.|+++++..+ ++|+.++|+.+++.+++|+|++|++|
T Consensus 130 ~~LS~G~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~g-~tii~~sH~~~~~~~~~d~i~~l~~G 208 (241)
T PRK14250 130 KNLSGGEAQRVSIARTLANNPEVLLLDEPTSALDPTSTEIIEELIVKLKNKMN-LTVIWITHNMEQAKRIGDYTAFLNKG 208 (241)
T ss_pred ccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhCC-CEEEEEeccHHHHHHhCCEEEEEeCC
Confidence 46999999999999999999999999999999999999999999998865333 45666888999999999999999999
Q ss_pred eEEEecChhhH
Q 000997 385 QIVYQGPRVSV 395 (1194)
Q Consensus 385 ~iv~~G~~~~~ 395 (1194)
+++..|+.+++
T Consensus 209 ~i~~~~~~~~~ 219 (241)
T PRK14250 209 ILVEYAKTYDF 219 (241)
T ss_pred EEEEeCCHHHH
Confidence 99999988776
No 359
>PRK14242 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.4e-34 Score=317.18 Aligned_cols=209 Identities=24% Similarity=0.309 Sum_probs=165.8
Q ss_pred eeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHhcCcC--CCCceeeEEEECCccCCCC-----CCCceEEEEecCCCCC
Q 000997 149 TILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLG--HHLQVSGKITYNGHGFKEF-----VPPRTSAYVSQQDWQV 221 (1194)
Q Consensus 149 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~--~~~~~~G~i~~~G~~~~~~-----~~~~~~~yv~Q~d~~~ 221 (1194)
.+|+|+|+.|++|++++|+|||||||||||++|+|.++ +..+.+|+|.++|.++... ..++.++|++|++.++
T Consensus 20 ~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~i~~v~q~~~~~ 99 (253)
T PRK14242 20 QALHDISLEFEQNQVTALIGPSGCGKSTFLRCLNRMNDLIPGARVEGEILLDGENIYDPHVDVVELRRRVGMVFQKPNPF 99 (253)
T ss_pred eeecceeEEEeCCCEEEEECCCCCCHHHHHHHHHhhcccCCCCCCceEEEECCEEccccccCHHHHhhcEEEEecCCCCC
Confidence 59999999999999999999999999999999999864 1112489999999887532 1245799999998878
Q ss_pred CCCCHHHHHHHhhhccCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhccCcchhHHHHHHHHHhCCcccccccccC
Q 000997 222 AEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGD 301 (1194)
Q Consensus 222 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~k~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 301 (1194)
+ .||+||+.|+....+.... + .....++.+++.+||.+...+.. +
T Consensus 100 ~-~tv~enl~~~~~~~~~~~~-~--------------------------------~~~~~~~~~l~~~~l~~~~~~~~-~ 144 (253)
T PRK14242 100 P-KSIFENVAYGLRVNGVKDK-A--------------------------------YLAERVERSLRHAALWDEVKDRL-H 144 (253)
T ss_pred c-CcHHHHHHHHHHHcCCCCH-H--------------------------------HHHHHHHHHHHHcCCchhhhHHh-h
Confidence 7 5999999886432211000 0 00123566788888854221222 2
Q ss_pred ccCCCCChhhhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEE
Q 000997 302 EMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILL 381 (1194)
Q Consensus 302 ~~~~~LSGGqkqRvsia~al~~~~~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL 381 (1194)
...+.|||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|+++.+ + .+|+.++|+..++.+++|+|++|
T Consensus 145 ~~~~~LSgGq~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~--~-~tvii~tH~~~~~~~~~d~v~~l 221 (253)
T PRK14242 145 ESALGLSGGQQQRLCIARALAVEPEVLLMDEPASALDPIATQKIEELIHELKA--R-YTIIIVTHNMQQAARVSDVTAFF 221 (253)
T ss_pred CCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhc--C-CeEEEEEecHHHHHHhCCEEEEE
Confidence 33457999999999999999999999999999999999999999999999843 3 45666888889999999999999
Q ss_pred cCCeEEEecChhhH
Q 000997 382 SEGQIVYQGPRVSV 395 (1194)
Q Consensus 382 ~~G~iv~~G~~~~~ 395 (1194)
++|++++.|+.+++
T Consensus 222 ~~G~i~~~g~~~~~ 235 (253)
T PRK14242 222 YMGKLIEVGPTEQI 235 (253)
T ss_pred ECCEEEEeCCHHHH
Confidence 99999999988766
No 360
>PRK14268 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.3e-34 Score=319.15 Aligned_cols=204 Identities=21% Similarity=0.297 Sum_probs=166.3
Q ss_pred eeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCC--CceeeEEEECCccCCCC-----CCCceEEEEecCCCCC
Q 000997 149 TILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHH--LQVSGKITYNGHGFKEF-----VPPRTSAYVSQQDWQV 221 (1194)
Q Consensus 149 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~--~~~~G~i~~~G~~~~~~-----~~~~~~~yv~Q~d~~~ 221 (1194)
.+|+|+|++|++|++++|+|||||||||||++|+|.+++. .+.+|+|.++|.++... ..++.++|++|++.++
T Consensus 26 ~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~i~~v~q~~~~~ 105 (258)
T PRK14268 26 QALKNVSMQIPKNSVTALIGPSGCGKSTFIRCLNRMNDLIKNCRIEGKVSIEGEDIYEPDVDVVELRKNVGMVFQKPNPF 105 (258)
T ss_pred eeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCcccCCCcceEEEECCEEcccccchHHHHhhhEEEEecCCccC
Confidence 5999999999999999999999999999999999998642 12489999999876432 1245799999998877
Q ss_pred CCCCHHHHHHHhhhccCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhccCcchhHHHHHHHHHhCCc----ccccc
Q 000997 222 AEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLD----TCADT 297 (1194)
Q Consensus 222 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~k~~~~~~~~~~~~~~~~l~~lgL~----~~~dt 297 (1194)
+ +||+||+.|..+..+.. .+ .....++++++.+|+. +..++
T Consensus 106 ~-~tv~enl~~~~~~~~~~--~~--------------------------------~~~~~~~~~l~~~~l~~~~~~~~~~ 150 (258)
T PRK14268 106 P-MSIYDNVAYGPRIHGAN--KK--------------------------------DLDGVVENALRSAALWDETSDRLKS 150 (258)
T ss_pred c-ccHHHHHHHHHHHcCCC--HH--------------------------------HHHHHHHHHHHHcCCCcchhhhhcC
Confidence 7 89999998864322110 00 0012366788888884 33344
Q ss_pred cccCccCCCCChhhhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCe
Q 000997 298 LVGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDD 377 (1194)
Q Consensus 298 ~vg~~~~~~LSGGqkqRvsia~al~~~~~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~ 377 (1194)
. ...|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++.+ + ++|+.++|..+++.+++|+
T Consensus 151 ~-----~~~LSgG~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~--~-~tiiivsH~~~~~~~~~d~ 222 (258)
T PRK14268 151 P-----ALSLSGGQQQRLCIARTLAVKPKIILFDEPTSALDPISTARIEDLIMNLKK--D-YTIVIVTHNMQQAARISDY 222 (258)
T ss_pred C-----hhhCCHHHHHHHHHHHHHHcCCCEEEEeCCCcccCHHHHHHHHHHHHHHhh--C-CEEEEEECCHHHHHHhCCE
Confidence 3 456999999999999999999999999999999999999999999998853 3 5666688899999999999
Q ss_pred EEEEcCCeEEEecChhhH
Q 000997 378 VILLSEGQIVYQGPRVSV 395 (1194)
Q Consensus 378 vilL~~G~iv~~G~~~~~ 395 (1194)
|++|++|++++.|+.+++
T Consensus 223 i~~l~~G~i~~~~~~~~~ 240 (258)
T PRK14268 223 TGFFLMGELIEFGQTRQI 240 (258)
T ss_pred EEEEECCEEEEeCCHHHH
Confidence 999999999999998776
No 361
>PRK11124 artP arginine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.6e-34 Score=318.18 Aligned_cols=203 Identities=26% Similarity=0.306 Sum_probs=168.2
Q ss_pred eeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCceeeEEEECCccCCC------C---CCCceEEEEecCCC
Q 000997 149 TILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKE------F---VPPRTSAYVSQQDW 219 (1194)
Q Consensus 149 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~------~---~~~~~~~yv~Q~d~ 219 (1194)
.+|+|+|+++++||+++|+|||||||||||++|+|.+++. +|+|.++|.++.. . ..++.++|++|++.
T Consensus 16 ~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~~~~i~~~~q~~~ 92 (242)
T PRK11124 16 QALFDITLDCPQGETLVLLGPSGAGKSSLLRVLNLLEMPR---SGTLNIAGNHFDFSKTPSDKAIRELRRNVGMVFQQYN 92 (242)
T ss_pred eeEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEecccccccchhhHHHHHhheEEEecCcc
Confidence 5999999999999999999999999999999999998776 9999999987521 0 12357999999999
Q ss_pred CCCCCCHHHHHHHh-hhccCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhccCcchhHHHHHHHHHhCCccccccc
Q 000997 220 QVAEMTVRETLDFA-GQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTL 298 (1194)
Q Consensus 220 ~~~~lTV~E~l~f~-~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~k~~~~~~~~~~~~~~~~l~~lgL~~~~dt~ 298 (1194)
+++.+||.||+.+. ....+... .+....++.+++.+||+...++.
T Consensus 93 ~~~~~tv~e~i~~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~gl~~~~~~~ 138 (242)
T PRK11124 93 LWPHLTVQQNLIEAPCRVLGLSK----------------------------------DQALARAEKLLERLRLKPYADRF 138 (242)
T ss_pred ccCCCcHHHHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCChhhhhCC
Confidence 99999999999753 11111000 00112367788999998766665
Q ss_pred ccCccCCCCChhhhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeE
Q 000997 299 VGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDV 378 (1194)
Q Consensus 299 vg~~~~~~LSGGqkqRvsia~al~~~~~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~v 378 (1194)
+ +.|||||||||+||+|++.+|++++|||||+|||+.++..+.+.|+++.. . +++++.++|+..++.+++|++
T Consensus 139 ~-----~~LS~G~~qrv~laral~~~p~llilDEPt~~LD~~~~~~l~~~l~~~~~-~-~~tii~~sh~~~~~~~~~d~i 211 (242)
T PRK11124 139 P-----LHLSGGQQQRVAIARALMMEPQVLLFDEPTAALDPEITAQIVSIIRELAE-T-GITQVIVTHEVEVARKTASRV 211 (242)
T ss_pred h-----hhCCHHHHHHHHHHHHHhcCCCEEEEcCCCCcCCHHHHHHHHHHHHHHHH-c-CCEEEEEeCCHHHHHHhcCEE
Confidence 5 46999999999999999999999999999999999999999999998864 2 455666888888999999999
Q ss_pred EEEcCCeEEEecChhhH
Q 000997 379 ILLSEGQIVYQGPRVSV 395 (1194)
Q Consensus 379 ilL~~G~iv~~G~~~~~ 395 (1194)
++|.+|++++.|+.+++
T Consensus 212 ~~l~~g~i~~~~~~~~~ 228 (242)
T PRK11124 212 VYMENGHIVEQGDASCF 228 (242)
T ss_pred EEEECCEEEEeCCHHHh
Confidence 99999999999987654
No 362
>PRK14275 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.4e-34 Score=322.35 Aligned_cols=215 Identities=21% Similarity=0.308 Sum_probs=171.2
Q ss_pred eeEeecceeeeecccccccccccccceEEeeeeeEEEeCCcEEEEEccCCCChHHHHhhhcCCCC--C-CeeEEEEEEcC
Q 000997 816 SMAFGNINYFVDVPVELKQEGVLEDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKT--G-GIIEGDIYISG 892 (1194)
Q Consensus 816 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~--~-~~~~G~i~i~g 892 (1194)
.+.++++++.+ ++..+|+|+|++|++||++||+||||||||||+++|+|... + .+.+|+|.++|
T Consensus 39 ~l~~~~l~~~~-------------~~~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~L~Gl~~~~p~~~~~G~I~~~g 105 (286)
T PRK14275 39 HVVAKNFSIYY-------------GEFEAVKKVNADILSKYVTAIIGPSGCGKSTFLRAINRMNDLIPSCHTTGALMFDG 105 (286)
T ss_pred EEEEeeeEEEE-------------CCEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCCceEEEECC
Confidence 45666666544 33569999999999999999999999999999999999642 1 12589999999
Q ss_pred ccCCh-----hcccceeeEeecCCCCCCCCcHHHHHHHHhhhcCCCcCcHHHHHHHHHHHHHHcCCCc----ccCCcccC
Q 000997 893 YPKRQ-----ETFARISGYCEQNDIHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTS----LSGALIGL 963 (1194)
Q Consensus 893 ~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~----~~~~~~~~ 963 (1194)
.++.. ..+++.+||++|++.+++. |+.||+.|....+.. ......++.+.++++.+++.+ ..+.
T Consensus 106 ~~i~~~~~~~~~~~~~i~~v~q~~~l~~~-tv~enl~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~l~~~~~~---- 178 (286)
T PRK14275 106 EDIYGKFTDEVLLRKKIGMVFQKPNPFPK-SIFDNIAYGPRLHGI--NDKKQLEEIVEKSLRKAALWDEVSDRLDK---- 178 (286)
T ss_pred EEhhhcccchHHhhhcEEEECCCCCCCcc-CHHHHHHhHHHhcCC--CcHHHHHHHHHHHHHHhCCccchhhHhhC----
Confidence 87532 1345679999999988875 999999986543211 112233455777888888742 2222
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCeEEEEc
Q 000997 964 PGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMK 1043 (1194)
Q Consensus 964 ~~~~~LSgGqrqrl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~~d~~~~l~ 1043 (1194)
.+..|||||||||+|||||+.+|++|+|||||+|||+.+...+.+.|+++.+ ++|||+++|+++ .+.+.+|++++|+
T Consensus 179 -~~~~LSgGq~qrv~LAraL~~~p~lllLDEPt~gLD~~~~~~l~~~L~~~~~-~~tvIivsH~~~-~~~~~~d~i~~L~ 255 (286)
T PRK14275 179 -NALGLSGGQQQRLCVARTLAVEPEILLLDEPTSALDPKATAKIEDLIQELRG-SYTIMIVTHNMQ-QASRVSDYTMFFY 255 (286)
T ss_pred -ChhhCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhc-CCeEEEEeCCHH-HHHHhCCEEEEEE
Confidence 2468999999999999999999999999999999999999999999999865 689999999986 4667899999998
Q ss_pred cCcEEEEeCCC
Q 000997 1044 RGGELIYAGPL 1054 (1194)
Q Consensus 1044 ~gG~~~~~g~~ 1054 (1194)
+|+++..|+.
T Consensus 256 -~G~i~~~g~~ 265 (286)
T PRK14275 256 -EGVLVEHAPT 265 (286)
T ss_pred -CCEEEEeCCH
Confidence 4789998875
No 363
>PRK13644 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.7e-34 Score=324.73 Aligned_cols=203 Identities=24% Similarity=0.347 Sum_probs=169.0
Q ss_pred eeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCceeeEEEECCccCCCCC----CCceEEEEecCCC-CCCC
Q 000997 149 TILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV----PPRTSAYVSQQDW-QVAE 223 (1194)
Q Consensus 149 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~~----~~~~~~yv~Q~d~-~~~~ 223 (1194)
.+|+|||++|++|++++|+|||||||||||++|+|.+++. +|+|.++|.++.... .++.++|++|++. .+..
T Consensus 16 ~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~~ 92 (274)
T PRK13644 16 PALENINLVIKKGEYIGIIGKNGSGKSTLALHLNGLLRPQ---KGKVLVSGIDTGDFSKLQGIRKLVGIVFQNPETQFVG 92 (274)
T ss_pred ceeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CceEEECCEECCccccHHHHHhheEEEEEChhhhccc
Confidence 5999999999999999999999999999999999998775 999999998875432 2357999999975 4677
Q ss_pred CCHHHHHHHhhhccCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhccCcchhHHHHHHHHHhCCcccccccccCcc
Q 000997 224 MTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEM 303 (1194)
Q Consensus 224 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~k~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~ 303 (1194)
.||.||+.|.....+... .+....++.+++.+||.+..++.++
T Consensus 93 ~tv~enl~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~gl~~~~~~~~~--- 135 (274)
T PRK13644 93 RTVEEDLAFGPENLCLPP----------------------------------IEIRKRVDRALAEIGLEKYRHRSPK--- 135 (274)
T ss_pred chHHHHHHhhHHHcCCCH----------------------------------HHHHHHHHHHHHHCCCHHHhcCCcc---
Confidence 899999988643221100 0012246778999999887776554
Q ss_pred CCCCChhhhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEcC
Q 000997 304 LKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSE 383 (1194)
Q Consensus 304 ~~~LSGGqkqRvsia~al~~~~~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~~ 383 (1194)
.|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++.. . +++|+.++|+.+++ ..+|+|++|++
T Consensus 136 --~LS~G~~qrv~laral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~l~~-~-g~til~~tH~~~~~-~~~d~v~~l~~ 210 (274)
T PRK13644 136 --TLSGGQGQCVALAGILTMEPECLIFDEVTSMLDPDSGIAVLERIKKLHE-K-GKTIVYITHNLEEL-HDADRIIVMDR 210 (274)
T ss_pred --cCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHh-C-CCEEEEEecCHHHH-hhCCEEEEEEC
Confidence 6999999999999999999999999999999999999999999999864 2 45566677888887 56999999999
Q ss_pred CeEEEecChhhHH
Q 000997 384 GQIVYQGPRVSVL 396 (1194)
Q Consensus 384 G~iv~~G~~~~~~ 396 (1194)
|++++.|+.+++.
T Consensus 211 G~i~~~g~~~~~~ 223 (274)
T PRK13644 211 GKIVLEGEPENVL 223 (274)
T ss_pred CEEEEECCHHHHh
Confidence 9999999988764
No 364
>PRK14261 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.5e-34 Score=318.34 Aligned_cols=207 Identities=26% Similarity=0.287 Sum_probs=165.7
Q ss_pred ceEEeeeeeEEEeCCcEEEEEccCCCChHHHHhhhcCCCCCC---eeEEEEEEcCccCCh-----hcccceeeEeecCCC
Q 000997 841 RLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGG---IIEGDIYISGYPKRQ-----ETFARISGYCEQNDI 912 (1194)
Q Consensus 841 ~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~---~~~G~i~i~g~~~~~-----~~~~~~~gyv~Q~~~ 912 (1194)
++.+|+|+||++++||+++|+||||||||||+++|+|..... +.+|+|.++|.++.. ...++.++|++|++.
T Consensus 18 ~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~~ 97 (253)
T PRK14261 18 EKHALYDITISIPKNRVTALIGPSGCGKSTLLRCFNRMNDLIPGCRITGDILYNGENIMDSGADVVALRRKIGMVFQRPN 97 (253)
T ss_pred CeeeeeeeEEEECCCcEEEEECCCCCCHHHHHHHHhccccCCCCCCcceEEEECCEEccccccchhhhhceEEEEecCCc
Confidence 457999999999999999999999999999999999974321 247999999987642 234567999999998
Q ss_pred CCCCCcHHHHHHHHhhhcCCCcCcHHHHHHHHHHHHHHcCCCcccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEE
Q 000997 913 HSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFM 992 (1194)
Q Consensus 913 ~~~~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illL 992 (1194)
+++. ||+||+.|....+.. ......++.+.++++.+++.+....... ..+..||+|||||++|||+|+.+|++++|
T Consensus 98 ~~~~-tv~eni~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~l~~~~~-~~~~~LS~G~~qrv~laral~~~p~lllL 173 (253)
T PRK14261 98 PFPK-SIYENVAYGPRIHGE--KNKKTLDTIVEKSLKGAALWDEVKDRLH-DSALSLSGGQQQRLCIARTLAVNPEVILM 173 (253)
T ss_pred cCcc-cHHHHHHhhHHhcCC--CCHHHHHHHHHHHHHHhcCchhhHHHhh-cChhhCCHHHHHHHHHHHHHhcCCCEEEE
Confidence 8875 999999987543321 1222334567788888877431111111 12458999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCeEEEEccCcEEEEeCCC
Q 000997 993 DEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1194)
Q Consensus 993 DEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~ 1054 (1194)
||||+|||+.++..+.+.|+++++ ++|||+++|++. .+.+.+|++++|++ |+++..|+.
T Consensus 174 DEP~~gLD~~~~~~l~~~l~~~~~-~~tvii~sh~~~-~~~~~~d~v~~l~~-G~i~~~g~~ 232 (253)
T PRK14261 174 DEPCSALDPIATAKIEDLIEDLKK-EYTVIIVTHNMQ-QAARVSDYTGFMYL-GKLIEFDKT 232 (253)
T ss_pred eCCcccCCHHHHHHHHHHHHHHhh-CceEEEEEcCHH-HHHhhCCEEEEEEC-CEEEEcCCH
Confidence 999999999999999999999875 689999999976 46678999999984 789988875
No 365
>cd03231 ABC_CcmA_heme_exporter CcmA, the ATP-binding component of the bacterial CcmAB transporter. The CCM family is involved in bacterial cytochrome c biogenesis. Cytochrome c maturation in E. coli requires the ccm operon, which encodes eight membrane proteins (CcmABCDEFGH). CcmE is a periplasmic heme chaperone that binds heme covalently and transfers it onto apocytochrome c in the presence of CcmF, CcmG, and CcmH. The CcmAB proteins represent an ABC transporter and the CcmCD proteins participate in heme transfer to CcmE.
Probab=100.00 E-value=1.3e-34 Score=310.96 Aligned_cols=186 Identities=27% Similarity=0.334 Sum_probs=159.9
Q ss_pred cceEEeeeeeEEEeCCcEEEEEccCCCChHHHHhhhcCCCCCCeeEEEEEEcCccCCh--hcccceeeEeecCCCCCCCC
Q 000997 840 DRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ--ETFARISGYCEQNDIHSPGL 917 (1194)
Q Consensus 840 ~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~--~~~~~~~gyv~Q~~~~~~~l 917 (1194)
+++.+|+|+|++|++||++||+|+||||||||+++|+|..+ +.+|+|.++|.+... ..+++.++|++|++.+++.+
T Consensus 11 ~~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~~~~~~~~~i~~~~q~~~~~~~~ 88 (201)
T cd03231 11 DGRALFSGLSFTLAAGEALQVTGPNGSGKTTLLRILAGLSP--PLAGRVLLNGGPLDFQRDSIARGLLYLGHAPGIKTTL 88 (201)
T ss_pred CCceeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEecccccHHhhhheEEeccccccCCCc
Confidence 34579999999999999999999999999999999999876 468999999987532 33566799999999888899
Q ss_pred cHHHHHHHHhhhcCCCcCcHHHHHHHHHHHHHHcCCCcccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCC
Q 000997 918 TVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTS 997 (1194)
Q Consensus 918 Tv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEPTs 997 (1194)
|++||+.+.... . ..+.++++++.+++.+..+..+ ..||||||||++|||+|+.+|++|+|||||+
T Consensus 89 tv~e~l~~~~~~------~---~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrl~laral~~~p~llllDEPt~ 154 (201)
T cd03231 89 SVLENLRFWHAD------H---SDEQVEEALARVGLNGFEDRPV-----AQLSAGQQRRVALARLLLSGRPLWILDEPTT 154 (201)
T ss_pred CHHHHHHhhccc------c---cHHHHHHHHHHcCChhhhcCch-----hhCCHHHHHHHHHHHHHhcCCCEEEEeCCCC
Confidence 999999875311 0 2345788999999987766543 5799999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCeEEEE
Q 000997 998 GLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFM 1042 (1194)
Q Consensus 998 gLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~~d~~~~l 1042 (1194)
|||+.+...+++.|+++.++|+|||+++|++. +....+++++++
T Consensus 155 ~LD~~~~~~l~~~l~~~~~~g~tiii~sH~~~-~~~~~~~~~~~~ 198 (201)
T cd03231 155 ALDKAGVARFAEAMAGHCARGGMVVLTTHQDL-GLSEAGARELDL 198 (201)
T ss_pred CCCHHHHHHHHHHHHHHHhCCCEEEEEecCch-hhhhccceeEec
Confidence 99999999999999998777999999999976 577788888876
No 366
>PRK11614 livF leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.8e-34 Score=318.40 Aligned_cols=203 Identities=26% Similarity=0.385 Sum_probs=166.8
Q ss_pred eeeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCceeeEEEECCccCCCCC----CCceEEEEecCCCCCCC
Q 000997 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV----PPRTSAYVSQQDWQVAE 223 (1194)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~~----~~~~~~yv~Q~d~~~~~ 223 (1194)
+.+|+|+|++|++||+++|+|||||||||||++|+|.++|. +|+|.++|.++.... .++.++|++|++.+++.
T Consensus 18 ~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~---~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~ 94 (237)
T PRK11614 18 IQALHEVSLHINQGEIVTLIGANGAGKTTLLGTLCGDPRAT---SGRIVFDGKDITDWQTAKIMREAVAIVPEGRRVFSR 94 (237)
T ss_pred ceeeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCC---CceEEECCEecCCCCHHHHHHhCEEEeccCcccCCC
Confidence 35999999999999999999999999999999999998876 999999998875543 23569999999988998
Q ss_pred CCHHHHHHHhhhccCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhccCcchhHHHHHHHHHh-CCcccccccccCc
Q 000997 224 MTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKIL-GLDTCADTLVGDE 302 (1194)
Q Consensus 224 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~k~~~~~~~~~~~~~~~~l~~l-gL~~~~dt~vg~~ 302 (1194)
+||.||+.++..... . + + ....++.+++.+ +|.+..++.+
T Consensus 95 ~tv~~~l~~~~~~~~--~--~---~-----------------------------~~~~~~~~l~~~~~l~~~~~~~~--- 135 (237)
T PRK11614 95 MTVEENLAMGGFFAE--R--D---Q-----------------------------FQERIKWVYELFPRLHERRIQRA--- 135 (237)
T ss_pred CcHHHHHHHhhhccC--h--h---H-----------------------------HHHHHHHHHHHHHHHHHHHhCch---
Confidence 999999987532110 0 0 0 011244556666 4655445443
Q ss_pred cCCCCChhhhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEc
Q 000997 303 MLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLS 382 (1194)
Q Consensus 303 ~~~~LSGGqkqRvsia~al~~~~~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~ 382 (1194)
..|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++++. + ++|+.++|+.+++.+++|++++|+
T Consensus 136 --~~LS~G~~qrl~la~al~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~-~-~tiii~sH~~~~~~~~~d~i~~l~ 211 (237)
T PRK11614 136 --GTMSGGEQQMLAIGRALMSQPRLLLLDEPSLGLAPIIIQQIFDTIEQLREQ-G-MTIFLVEQNANQALKLADRGYVLE 211 (237)
T ss_pred --hhCCHHHHHHHHHHHHHHhCCCEEEEcCccccCCHHHHHHHHHHHHHHHHC-C-CEEEEEeCcHHHHHhhCCEEEEEe
Confidence 469999999999999999999999999999999999999999999998653 4 455667888899999999999999
Q ss_pred CCeEEEecChhhHH
Q 000997 383 EGQIVYQGPRVSVL 396 (1194)
Q Consensus 383 ~G~iv~~G~~~~~~ 396 (1194)
+|++++.|+.+++.
T Consensus 212 ~G~i~~~~~~~~~~ 225 (237)
T PRK11614 212 NGHVVLEDTGDALL 225 (237)
T ss_pred CCEEEeeCCHHHHh
Confidence 99999999987763
No 367
>TIGR01184 ntrCD nitrate transport ATP-binding subunits C and D. This model describes the ATP binding subunits of nitrate transport in bacteria and archaea. This protein belongs to the ATP-binding cassette (ABC) superfamily. It is thought that the two subunits encoded by ntrC and ntrD form the binding surface for interaction with ATP. This model is restricted in identifying ATP binding subunit associated with the nitrate transport. Nitrate assimilation is aided by other proteins derived from the operon which among others include products of ntrA - a regulatory protein; ntrB - a hydropbobic transmembrane permease and narB - a reductase.
Probab=100.00 E-value=2.3e-34 Score=315.63 Aligned_cols=202 Identities=27% Similarity=0.324 Sum_probs=166.3
Q ss_pred eecceEeEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCceeeEEEECCccCCCCCCCceEEEEecCCCCCCCCCHHHHH
Q 000997 151 LDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVPPRTSAYVSQQDWQVAEMTVRETL 230 (1194)
Q Consensus 151 L~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lTV~E~l 230 (1194)
|+|+|++|++|++++|+||||||||||+++|+|.+++. +|+|.++|.++..... ..+|++|++.+++.+||.||+
T Consensus 1 l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~--~~~~v~q~~~l~~~~tv~e~l 75 (230)
T TIGR01184 1 LKGVNLTIQQGEFISLIGHSGCGKSTLLNLISGLAQPT---SGGVILEGKQITEPGP--DRMVVFQNYSLLPWLTVRENI 75 (230)
T ss_pred CCceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEECCCCCh--hheEEecCcccCCCCCHHHHH
Confidence 57999999999999999999999999999999998776 9999999988754322 248999999989999999999
Q ss_pred HHhhhccCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhccCcchhHHHHHHHHHhCCcccccccccCccCCCCChh
Q 000997 231 DFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEMLKGISGG 310 (1194)
Q Consensus 231 ~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~k~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~LSGG 310 (1194)
.+........ .+ . ......++.+++.+||++..++.++ .||||
T Consensus 76 ~~~~~~~~~~--~~------~------------------------~~~~~~~~~~l~~~~l~~~~~~~~~-----~LSgG 118 (230)
T TIGR01184 76 ALAVDRVLPD--LS------K------------------------SERRAIVEEHIALVGLTEAADKRPG-----QLSGG 118 (230)
T ss_pred HHHHHhcccC--CC------H------------------------HHHHHHHHHHHHHcCCHHHHcCChh-----hCCHH
Confidence 8753210000 00 0 0012236778999999877776654 69999
Q ss_pred hhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEcCCeEEEec
Q 000997 311 QKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEGQIVYQG 390 (1194)
Q Consensus 311 qkqRvsia~al~~~~~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~~G~iv~~G 390 (1194)
|||||+||+||+.+|++|+|||||+|||+.++..+.+.|+++++.. +++|+.++|..+++.+++|+|++|++|+++..|
T Consensus 119 ~~qrv~la~al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~~-~~tii~~sH~~~~~~~~~d~v~~l~~G~i~~~~ 197 (230)
T TIGR01184 119 MKQRVAIARALSIRPKVLLLDEPFGALDALTRGNLQEELMQIWEEH-RVTVLMVTHDVDEALLLSDRVVMLTNGPAANIG 197 (230)
T ss_pred HHHHHHHHHHHHcCCCEEEEcCCCcCCCHHHHHHHHHHHHHHHHhc-CCEEEEEeCCHHHHHHhcCEEEEEeCCcEeccc
Confidence 9999999999999999999999999999999999999999887543 445666888889999999999999999999988
Q ss_pred ChhhH
Q 000997 391 PRVSV 395 (1194)
Q Consensus 391 ~~~~~ 395 (1194)
+..++
T Consensus 198 ~~~~~ 202 (230)
T TIGR01184 198 QILEV 202 (230)
T ss_pred Cceec
Confidence 65443
No 368
>TIGR03411 urea_trans_UrtD urea ABC transporter, ATP-binding protein UrtD. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=100.00 E-value=2.9e-34 Score=317.89 Aligned_cols=211 Identities=24% Similarity=0.356 Sum_probs=172.1
Q ss_pred eeeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCceeeEEEECCccCCCCCC----CceEEEEecCCCCCCC
Q 000997 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVP----PRTSAYVSQQDWQVAE 223 (1194)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~~~----~~~~~yv~Q~d~~~~~ 223 (1194)
+++|+|+|++|++|++++|+|||||||||||++|+|.++|. +|+|.++|.++..... ++.++|++|++.+++.
T Consensus 15 ~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~---~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~ 91 (242)
T TIGR03411 15 FKALNDLSLYVDPGELRVIIGPNGAGKTTMMDVITGKTRPD---EGSVLFGGTDLTGLPEHQIARAGIGRKFQKPTVFEN 91 (242)
T ss_pred eEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---CCeEEECCeecCCCCHHHHHhcCeeEeccccccCCC
Confidence 36999999999999999999999999999999999998776 9999999987754321 3469999999999999
Q ss_pred CCHHHHHHHhhhccCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhccCcchhHHHHHHHHHhCCcccccccccCcc
Q 000997 224 MTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEM 303 (1194)
Q Consensus 224 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~k~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~ 303 (1194)
+||+||+.++..... ..+..... .. ..+....++++++.+||++..++.++
T Consensus 92 ~tv~~nl~~~~~~~~--~~~~~~~~-----------~~-------------~~~~~~~~~~~l~~~~l~~~~~~~~~--- 142 (242)
T TIGR03411 92 LTVFENLELALPRDK--SVFASLFF-----------RL-------------SAEEKDRIEEVLETIGLADEADRLAG--- 142 (242)
T ss_pred CCHHHHHHHhhhccc--cccccccc-----------cc-------------HHHHHHHHHHHHHHcCCchhhcCChh---
Confidence 999999988543110 00000000 00 00112347788999999887776554
Q ss_pred CCCCChhhhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEcC
Q 000997 304 LKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSE 383 (1194)
Q Consensus 304 ~~~LSGGqkqRvsia~al~~~~~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~~ 383 (1194)
.|||||||||+||+|++.+|++|+|||||+|||+.++..+.+.|+++.+ + .+|+.++|..+++.++||+|++|++
T Consensus 143 --~LS~Ge~qrv~laral~~~p~~lllDEPt~~LD~~~~~~l~~~l~~~~~--~-~tii~~sH~~~~~~~~~d~i~~l~~ 217 (242)
T TIGR03411 143 --LLSHGQKQWLEIGMLLMQDPKLLLLDEPVAGMTDEETEKTAELLKSLAG--K-HSVVVVEHDMEFVRSIADKVTVLHQ 217 (242)
T ss_pred --hCCHHHHHHHHHHHHHhcCCCEEEecCCccCCCHHHHHHHHHHHHHHhc--C-CEEEEEECCHHHHHHhCCEEEEEEC
Confidence 6999999999999999999999999999999999999999999999864 3 4566688899999999999999999
Q ss_pred CeEEEecChhhH
Q 000997 384 GQIVYQGPRVSV 395 (1194)
Q Consensus 384 G~iv~~G~~~~~ 395 (1194)
|++++.|+.+++
T Consensus 218 g~~~~~~~~~~~ 229 (242)
T TIGR03411 218 GSVLAEGSLDQV 229 (242)
T ss_pred CeEEeeCCHHHH
Confidence 999999987765
No 369
>PRK11701 phnK phosphonate C-P lyase system protein PhnK; Provisional
Probab=100.00 E-value=3.2e-34 Score=320.37 Aligned_cols=202 Identities=26% Similarity=0.307 Sum_probs=164.8
Q ss_pred eEEeeeeeEEEeCCcEEEEEccCCCChHHHHhhhcCCCCCCeeEEEEEEcCcc-----CCh---hc----ccceeeEeec
Q 000997 842 LQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYP-----KRQ---ET----FARISGYCEQ 909 (1194)
Q Consensus 842 ~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~-----~~~---~~----~~~~~gyv~Q 909 (1194)
+.+|+|+||++++||++||+||||||||||+++|+|..+ +.+|+|.++|.+ +.. .. .++.++|++|
T Consensus 19 ~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~~~~~~i~~~~~~~~~~~~~~~i~~v~q 96 (258)
T PRK11701 19 RKGCRDVSFDLYPGEVLGIVGESGSGKTTLLNALSARLA--PDAGEVHYRMRDGQLRDLYALSEAERRRLLRTEWGFVHQ 96 (258)
T ss_pred ceeeeeeeEEEeCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCCEEEECCccccccccccCCHHHHHHHhhcceEEEee
Confidence 469999999999999999999999999999999999876 468999999986 432 11 2346899999
Q ss_pred CCC--CCCCCcHHHHHHHHhhhcCCCcCcHHHHHHHHHHHHHHcCCCc-ccCCcccCCCCCCCCHHHHHHHHHHHHHhhC
Q 000997 910 NDI--HSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTS-LSGALIGLPGINGLSTEQRKRLTIAVELVAN 986 (1194)
Q Consensus 910 ~~~--~~~~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~-~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~ 986 (1194)
++. +.+.+|+.||+.+...... .....+....+.++++.+++.+ ..+.. +..||||||||++|||||+.+
T Consensus 97 ~~~~~~~~~~~~~~~i~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~~LS~Gq~qrl~laral~~~ 169 (258)
T PRK11701 97 HPRDGLRMQVSAGGNIGERLMAVG--ARHYGDIRATAGDWLERVEIDAARIDDL-----PTTFSGGMQQRLQIARNLVTH 169 (258)
T ss_pred CcccccCccccHHHHHHHHHHHhc--cCcHHHHHHHHHHHHHHcCCChhHHhCC-----CccCCHHHHHHHHHHHHHhcC
Confidence 974 5677899999976432111 1112233456788899999863 44433 358999999999999999999
Q ss_pred CCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCeEEEEccCcEEEEeCCC
Q 000997 987 PSIVFMDEPTSGLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1194)
Q Consensus 987 p~illLDEPTsgLD~~~~~~i~~~l~~l~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~ 1054 (1194)
|+||+|||||+|||+.+...+++.|++++++ |.|||+++|+++ .+...+|++++|++ |++++.|+.
T Consensus 170 p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~isH~~~-~~~~~~d~i~~l~~-g~i~~~~~~ 236 (258)
T PRK11701 170 PRLVFMDEPTGGLDVSVQARLLDLLRGLVRELGLAVVIVTHDLA-VARLLAHRLLVMKQ-GRVVESGLT 236 (258)
T ss_pred CCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHH-HHHHhcCEEEEEEC-CEEEEeCCH
Confidence 9999999999999999999999999998765 899999999976 45567999999984 899998875
No 370
>TIGR02142 modC_ABC molybdenum ABC transporter, ATP-binding protein. This model represents the ATP-binding cassette (ABC) protein of the three subunit molybdate ABC transporter. The three proteins of this complex are homologous to proteins of the sulfate ABC transporter. Molybdenum may be used in nitrogenases of nitrogen-fixing bacteria and in molybdopterin cofactors. In some cases, molybdate may be transported by a sulfate transporter rather than by a specific molybdate transporter.
Probab=100.00 E-value=3e-34 Score=333.53 Aligned_cols=199 Identities=27% Similarity=0.457 Sum_probs=169.9
Q ss_pred cceEeEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCceeeEEEECCccCCCC-------CCCceEEEEecCCCCCCCCC
Q 000997 153 DLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEF-------VPPRTSAYVSQQDWQVAEMT 225 (1194)
Q Consensus 153 ~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~-------~~~~~~~yv~Q~d~~~~~lT 225 (1194)
|+|+.+++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++... ..++.++|++|++.+++.+|
T Consensus 15 ~isl~i~~Gei~~l~G~nGsGKSTLl~~iaGl~~p~---~G~I~~~g~~i~~~~~~~~~~~~~~~i~~v~q~~~l~~~~t 91 (354)
T TIGR02142 15 DADFTLPGQGVTAIFGRSGSGKTTLIRLIAGLTRPD---EGEIVLNGRTLFDSRKGIFLPPEKRRIGYVFQEARLFPHLS 91 (354)
T ss_pred EEEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEECccCccccccchhhCCeEEEecCCccCCCCc
Confidence 999999999999999999999999999999999876 99999999886432 12467999999999999999
Q ss_pred HHHHHHHhhhccCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhccCcchhHHHHHHHHHhCCcccccccccCccCC
Q 000997 226 VRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEMLK 305 (1194)
Q Consensus 226 V~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~k~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~ 305 (1194)
|+||+.|+.+... . .+....++++++.+||++..++.+ .
T Consensus 92 v~enl~~~~~~~~--~----------------------------------~~~~~~~~~~l~~~gL~~~~~~~~-----~ 130 (354)
T TIGR02142 92 VRGNLRYGMKRAR--P----------------------------------SERRISFERVIELLGIGHLLGRLP-----G 130 (354)
T ss_pred HHHHHHHHhhccC--h----------------------------------hHHHHHHHHHHHHcCChhHhcCCh-----h
Confidence 9999988643110 0 001223678899999988777665 4
Q ss_pred CCChhhhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEcCCe
Q 000997 306 GISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEGQ 385 (1194)
Q Consensus 306 ~LSGGqkqRvsia~al~~~~~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~~G~ 385 (1194)
.|||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|+++.+.. +++++.++|+.+++..++|+|++|++|+
T Consensus 131 ~LSgGqkqRvalAraL~~~p~lllLDEPts~LD~~~~~~l~~~L~~l~~~~-g~tiiivtH~~~~~~~~~d~i~~l~~G~ 209 (354)
T TIGR02142 131 RLSGGEKQRVAIGRALLSSPRLLLMDEPLAALDDPRKYEILPYLERLHAEF-GIPILYVSHSLQEVLRLADRVVVLEDGR 209 (354)
T ss_pred hCCHHHHHHHHHHHHHHcCCCEEEEcCCCcCCCHHHHHHHHHHHHHHHHhc-CCEEEEEecCHHHHHHhCCEEEEEeCCE
Confidence 699999999999999999999999999999999999999999999987643 4556668899999999999999999999
Q ss_pred EEEecChhhHH
Q 000997 386 IVYQGPRVSVL 396 (1194)
Q Consensus 386 iv~~G~~~~~~ 396 (1194)
+++.|+++++.
T Consensus 210 i~~~g~~~~~~ 220 (354)
T TIGR02142 210 VAAAGPIAEVW 220 (354)
T ss_pred EEEECCHHHHh
Confidence 99999988764
No 371
>TIGR02770 nickel_nikD nickel import ATP-binding protein NikD. This family represents the NikD subunit of a multisubunit nickel import ABC transporter complex. Nickel, once imported, may be used in urease and in certain classes of hydrogenase and superoxide dismutase. NikD and NikE are homologous.
Probab=100.00 E-value=2.4e-34 Score=315.70 Aligned_cols=207 Identities=21% Similarity=0.276 Sum_probs=167.7
Q ss_pred eeecceEeEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCC-CceeeEEEECCccCCCCCC-CceEEEEecCCC--CCCCCC
Q 000997 150 ILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHH-LQVSGKITYNGHGFKEFVP-PRTSAYVSQQDW--QVAEMT 225 (1194)
Q Consensus 150 iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~-~~~~G~i~~~G~~~~~~~~-~~~~~yv~Q~d~--~~~~lT 225 (1194)
+|+|+|+++++|++++|+||||||||||+++|+|.++|. .+.+|+|.++|+++..... ++.++|++|++. +.+.+|
T Consensus 1 ~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~~~~~G~i~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~~~t 80 (230)
T TIGR02770 1 LVQDLNLSLKRGEVLALVGESGSGKSLTCLAILGLLPPGLTQTSGEILLDGRPLLPLSIRGRHIATIMQNPRTAFNPLFT 80 (230)
T ss_pred CccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCccCccccEEEECCEechhhhhhhheeEEEecCchhhcCcccC
Confidence 589999999999999999999999999999999998761 0139999999988754433 257999999984 556789
Q ss_pred HHHHHHHhhhccCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhccCcchhHHHHHHHHHhCCcc---cccccccCc
Q 000997 226 VRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDT---CADTLVGDE 302 (1194)
Q Consensus 226 V~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~k~~~~~~~~~~~~~~~~l~~lgL~~---~~dt~vg~~ 302 (1194)
+.|++.+.....+... ......++++++.+||++ ..+..
T Consensus 81 ~~~~~~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~~~---- 122 (230)
T TIGR02770 81 MGNHAIETLRSLGKLS----------------------------------KQARALILEALEAVGLPDPEEVLKKY---- 122 (230)
T ss_pred HHHHHHHHHHHcCccH----------------------------------HHHHHHHHHHHHHcCCCchHHHHhCC----
Confidence 9999977543211000 001224778899999973 34443
Q ss_pred cCCCCChhhhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEc
Q 000997 303 MLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLS 382 (1194)
Q Consensus 303 ~~~~LSGGqkqRvsia~al~~~~~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~ 382 (1194)
+..|||||||||+||+|++.+|++|+|||||+|||..+...+.+.|+++++.. +++|+.++|..+++..++|+|++|+
T Consensus 123 -~~~LS~G~~qrv~laral~~~p~vllLDEPt~~LD~~~~~~l~~~l~~~~~~~-~~tiii~sH~~~~~~~~~d~i~~l~ 200 (230)
T TIGR02770 123 -PFQLSGGMLQRVMIALALLLEPPFLIADEPTTDLDVVNQARVLKLLRELRQLF-GTGILLITHDLGVVARIADEVAVMD 200 (230)
T ss_pred -hhhcCHHHHHHHHHHHHHhcCCCEEEEcCCccccCHHHHHHHHHHHHHHHHhc-CCEEEEEeCCHHHHHHhCCEEEEEE
Confidence 45699999999999999999999999999999999999999999999986532 4566668888899999999999999
Q ss_pred CCeEEEecChhhHH
Q 000997 383 EGQIVYQGPRVSVL 396 (1194)
Q Consensus 383 ~G~iv~~G~~~~~~ 396 (1194)
+|+++..|+.+++.
T Consensus 201 ~G~i~~~~~~~~~~ 214 (230)
T TIGR02770 201 DGRIVERGTVKEIF 214 (230)
T ss_pred CCEEEEeCCHHHHH
Confidence 99999999987764
No 372
>PRK14271 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.4e-34 Score=322.27 Aligned_cols=219 Identities=23% Similarity=0.303 Sum_probs=174.6
Q ss_pred eeEeecceeeeecccccccccccccceEEeeeeeEEEeCCcEEEEEccCCCChHHHHhhhcCCCCC---CeeEEEEEEcC
Q 000997 816 SMAFGNINYFVDVPVELKQEGVLEDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTG---GIIEGDIYISG 892 (1194)
Q Consensus 816 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~---~~~~G~i~i~g 892 (1194)
.+..+|+++.+ +++.+|+||||++++||+++|+|+||||||||+++|+|..++ .+.+|+|.++|
T Consensus 21 ~l~i~nl~~~~-------------~~~~il~~vs~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~p~~~~~~~G~i~~~g 87 (276)
T PRK14271 21 AMAAVNLTLGF-------------AGKTVLDQVSMGFPARAVTSLMGPTGSGKTTFLRTLNRMNDKVSGYRYSGDVLLGG 87 (276)
T ss_pred EEEEeeEEEEE-------------CCEEEeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhccCCcCCCCCCceEEEECC
Confidence 35666766554 346799999999999999999999999999999999998652 13689999999
Q ss_pred ccCCh----hcccceeeEeecCCCCCCCCcHHHHHHHHhhhcCCCcCcHHHHHHHHHHHHHHcCCCcccCCcccCCCCCC
Q 000997 893 YPKRQ----ETFARISGYCEQNDIHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGING 968 (1194)
Q Consensus 893 ~~~~~----~~~~~~~gyv~Q~~~~~~~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~ 968 (1194)
.++.. ...++.++|++|++.+++ .|++||+.+...... .....+....+.++++.+++.+..+.... ..+..
T Consensus 88 ~~i~~~~~~~~~~~~i~~v~q~~~l~~-~tv~eni~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~l~-~~~~~ 163 (276)
T PRK14271 88 RSIFNYRDVLEFRRRVGMLFQRPNPFP-MSIMDNVLAGVRAHK--LVPRKEFRGVAQARLTEVGLWDAVKDRLS-DSPFR 163 (276)
T ss_pred EEccccchhHHHhhheEEeccCCccCC-ccHHHHHHHHHHhcc--CCCHHHHHHHHHHHHHHcCCCchhhhHhh-CCccc
Confidence 87632 234667999999988887 799999987643221 12233334456778888888643221111 12468
Q ss_pred CCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCeEEEEccCcEE
Q 000997 969 LSTEQRKRLTIAVELVANPSIVFMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGEL 1048 (1194)
Q Consensus 969 LSgGqrqrl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~ 1048 (1194)
||||||||++|||+|+.+|+||+|||||+|||+.++..+.+.|+++.+ ++|||+++|+++ ++.+.+|++++|. +|++
T Consensus 164 LSgGq~qrl~LAral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~-~~tiiivsH~~~-~~~~~~dri~~l~-~G~i 240 (276)
T PRK14271 164 LSGGQQQLLCLARTLAVNPEVLLLDEPTSALDPTTTEKIEEFIRSLAD-RLTVIIVTHNLA-QAARISDRAALFF-DGRL 240 (276)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhc-CCEEEEEeCCHH-HHHHhCCEEEEEE-CCEE
Confidence 999999999999999999999999999999999999999999999875 589999999976 5677899999998 4799
Q ss_pred EEeCCC
Q 000997 1049 IYAGPL 1054 (1194)
Q Consensus 1049 ~~~g~~ 1054 (1194)
+..|+.
T Consensus 241 ~~~g~~ 246 (276)
T PRK14271 241 VEEGPT 246 (276)
T ss_pred EEeCCH
Confidence 998875
No 373
>TIGR03740 galliderm_ABC gallidermin-class lantibiotic protection ABC transporter, ATP-binding subunit. Model TIGR03731 represents the family of all lantibiotics related to gallidermin, including epidermin, mutatin, and nisin. This protein family describes the ATP-binding subunit of a gallidermin/epidermin class lantibiotic protection transporter. It is largely restricted to gallidermin-family lantibiotic biosynthesis and export cassettes, but also occurs in orphan transporter cassettes in species that lack candidate lantibiotic precursor and synthetase genes.
Probab=100.00 E-value=3.4e-34 Score=313.22 Aligned_cols=197 Identities=26% Similarity=0.358 Sum_probs=167.6
Q ss_pred eeeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCceeeEEEECCccCCCCCCCceEEEEecCCCCCCCCCHH
Q 000997 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVPPRTSAYVSQQDWQVAEMTVR 227 (1194)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lTV~ 227 (1194)
.++|+|+|+.+++|++++|+|||||||||||++|+|.+++. +|+|.++|.++.... .+.++|++|++.+++.+||+
T Consensus 13 ~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~~~~~~~~~-~~~~~~~~q~~~~~~~~t~~ 88 (223)
T TIGR03740 13 QTAVNNISLTVPKNSVYGLLGPNGAGKSTLLKMITGILRPT---SGEIIFDGHPWTRKD-LHKIGSLIESPPLYENLTAR 88 (223)
T ss_pred EEEEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEeccccc-cccEEEEcCCCCccccCCHH
Confidence 46999999999999999999999999999999999998776 999999998765322 35799999999888889999
Q ss_pred HHHHHhhhccCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhccCcchhHHHHHHHHHhCCcccccccccCccCCCC
Q 000997 228 ETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEMLKGI 307 (1194)
Q Consensus 228 E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~k~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~L 307 (1194)
||+.+.....+. .+..+..+++.+||++..|..++ .|
T Consensus 89 ~~~~~~~~~~~~--------------------------------------~~~~~~~~l~~~~l~~~~~~~~~-----~L 125 (223)
T TIGR03740 89 ENLKVHTTLLGL--------------------------------------PDSRIDEVLNIVDLTNTGKKKAK-----QF 125 (223)
T ss_pred HHHHHHHHHcCC--------------------------------------CHHHHHHHHHHcCCcHHHhhhHh-----hC
Confidence 999875432110 01135678889999877766554 59
Q ss_pred ChhhhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEcCCeEE
Q 000997 308 SGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEGQIV 387 (1194)
Q Consensus 308 SGGqkqRvsia~al~~~~~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~~G~iv 387 (1194)
|||||||++||+|++.+|++++|||||+|||+.++..+.+.|+++++ . +.+|+.++|+.+++.+.+|+|++|++|+++
T Consensus 126 S~G~~~rv~laral~~~p~llllDEP~~~LD~~~~~~l~~~L~~~~~-~-~~tiii~sH~~~~~~~~~d~i~~l~~g~i~ 203 (223)
T TIGR03740 126 SLGMKQRLGIAIALLNHPKLLILDEPTNGLDPIGIQELRELIRSFPE-Q-GITVILSSHILSEVQQLADHIGIISEGVLG 203 (223)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEECCCccCCCHHHHHHHHHHHHHHHH-C-CCEEEEEcCCHHHHHHhcCEEEEEeCCEEE
Confidence 99999999999999999999999999999999999999999999864 2 445666778888999999999999999999
Q ss_pred EecChh
Q 000997 388 YQGPRV 393 (1194)
Q Consensus 388 ~~G~~~ 393 (1194)
+.|++.
T Consensus 204 ~~~~~~ 209 (223)
T TIGR03740 204 YQGKIN 209 (223)
T ss_pred EecChh
Confidence 999764
No 374
>COG1132 MdlB ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]
Probab=100.00 E-value=1.5e-34 Score=358.77 Aligned_cols=209 Identities=28% Similarity=0.391 Sum_probs=170.8
Q ss_pred ceeeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCceeeEEEECCccCCCCCC---CceEEEEecCCCCCCC
Q 000997 147 KLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVP---PRTSAYVSQQDWQVAE 223 (1194)
Q Consensus 147 ~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~ 223 (1194)
++++|+|+|+.++|||.++|+||||||||||++.|+|.+++. +|+|.+||.++++... ++.++||+|++.+|.
T Consensus 341 ~~~vl~~is~~i~~Ge~vaiVG~sGsGKSTl~~LL~r~~~~~---~G~I~idg~dI~~i~~~~lr~~I~~V~Qd~~LF~- 416 (567)
T COG1132 341 KKPVLKDISFSIEPGEKVAIVGPSGSGKSTLIKLLLRLYDPT---SGEILIDGIDIRDISLDSLRKRIGIVSQDPLLFS- 416 (567)
T ss_pred CCccccCceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCC---CCeEEECCEehhhcCHHHHHHhccEEcccceeec-
Confidence 346999999999999999999999999999999999999886 9999999999887653 688999999999887
Q ss_pred CCHHHHHHHhhhccCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhccCcchhHHHHHHHHHhCCcccccccccCcc
Q 000997 224 MTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEM 303 (1194)
Q Consensus 224 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~k~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~ 303 (1194)
.||+|||.++..- ...+.+.++++.. .....+ ..|++++||.||++
T Consensus 417 ~TI~~NI~~g~~~----at~eei~~a~k~a---------------------------~~~d~I--~~lp~g~dt~vge~- 462 (567)
T COG1132 417 GTIRENIALGRPD----ATDEEIEEALKLA---------------------------NAHEFI--ANLPDGYDTIVGER- 462 (567)
T ss_pred ccHHHHHhcCCCC----CCHHHHHHHHHHh---------------------------ChHHHH--HhCcccccceecCC-
Confidence 7999999986321 1112222222111 011222 23577899999954
Q ss_pred CCCCChhhhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEcC
Q 000997 304 LKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSE 383 (1194)
Q Consensus 304 ~~~LSGGqkqRvsia~al~~~~~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~~ 383 (1194)
..+||||||||++||||++.+|+||+||||||+||+.+...|.+.++++.+ ++|+++ +.|..+.+.+ +|+|++|++
T Consensus 463 G~~LSgGQrQrlaiARall~~~~ILILDEaTSalD~~tE~~I~~~l~~l~~--~rT~ii-IaHRlsti~~-aD~IiVl~~ 538 (567)
T COG1132 463 GVNLSGGQRQRLAIARALLRNPPILILDEATSALDTETEALIQDALKKLLK--GRTTLI-IAHRLSTIKN-ADRIIVLDN 538 (567)
T ss_pred CccCCHHHHHHHHHHHHHhcCCCEEEEeccccccCHHhHHHHHHHHHHHhc--CCEEEE-EeccHhHHHh-CCEEEEEEC
Confidence 457999999999999999999999999999999999999999999997653 456666 6676655555 999999999
Q ss_pred CeEEEecChhhHHH
Q 000997 384 GQIVYQGPRVSVLD 397 (1194)
Q Consensus 384 G~iv~~G~~~~~~~ 397 (1194)
|++++.|+++++..
T Consensus 539 G~i~e~G~h~eLl~ 552 (567)
T COG1132 539 GRIVERGTHEELLA 552 (567)
T ss_pred CEEEEecCHHHHHH
Confidence 99999999999875
No 375
>PRK13538 cytochrome c biogenesis protein CcmA; Provisional
Probab=100.00 E-value=1.6e-34 Score=311.09 Aligned_cols=188 Identities=23% Similarity=0.303 Sum_probs=157.7
Q ss_pred ceEEeeeeeEEEeCCcEEEEEccCCCChHHHHhhhcCCCCCCeeEEEEEEcCccCCh--hcccceeeEeecCCCCCCCCc
Q 000997 841 RLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ--ETFARISGYCEQNDIHSPGLT 918 (1194)
Q Consensus 841 ~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~--~~~~~~~gyv~Q~~~~~~~lT 918 (1194)
++.+|+|||+++++||++||+||||||||||+++|+|..+ +.+|+|.++|.++.. ..+++.++|++|++.+++.+|
T Consensus 13 ~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~--p~~G~v~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~t 90 (204)
T PRK13538 13 ERILFSGLSFTLNAGELVQIEGPNGAGKTSLLRILAGLAR--PDAGEVLWQGEPIRRQRDEYHQDLLYLGHQPGIKTELT 90 (204)
T ss_pred CEEEEecceEEECCCcEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEEcccchHHhhhheEEeCCccccCcCCc
Confidence 4579999999999999999999999999999999999876 468999999987532 234567899999998889999
Q ss_pred HHHHHHHHhhhcCCCcCcHHHHHHHHHHHHHHcCCCcccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCC
Q 000997 919 VLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSG 998 (1194)
Q Consensus 919 v~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEPTsg 998 (1194)
++||+.+....+. . ...+.++++++.+++.+..+.. +..||||||||++||+||+.+|++|+|||||+|
T Consensus 91 v~e~l~~~~~~~~---~---~~~~~~~~~l~~~gl~~~~~~~-----~~~LS~G~~qrl~la~al~~~p~llllDEPt~~ 159 (204)
T PRK13538 91 ALENLRFYQRLHG---P---GDDEALWEALAQVGLAGFEDVP-----VRQLSAGQQRRVALARLWLTRAPLWILDEPFTA 159 (204)
T ss_pred HHHHHHHHHHhcC---c---cHHHHHHHHHHHcCCHHHhhCC-----hhhcCHHHHHHHHHHHHHhcCCCEEEEeCCCcc
Confidence 9999988654321 1 1234678899999998766654 357999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCeEEEE
Q 000997 999 LDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFM 1042 (1194)
Q Consensus 999 LD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~~d~~~~l 1042 (1194)
||+.+...+++.|++++++|.|||+++|+++ .+.+.-+|++++
T Consensus 160 LD~~~~~~l~~~l~~~~~~~~tiii~sh~~~-~i~~~~~~~~~~ 202 (204)
T PRK13538 160 IDKQGVARLEALLAQHAEQGGMVILTTHQDL-PVASDKVRKLRL 202 (204)
T ss_pred CCHHHHHHHHHHHHHHHHCCCEEEEEecChh-hhccCCceEEec
Confidence 9999999999999999877999999999976 343433555544
No 376
>PRK13548 hmuV hemin importer ATP-binding subunit; Provisional
Probab=100.00 E-value=3.4e-34 Score=319.73 Aligned_cols=206 Identities=29% Similarity=0.461 Sum_probs=170.9
Q ss_pred eeeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCceeeEEEECCccCCCCC---CCceEEEEecCCCCCCCC
Q 000997 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV---PPRTSAYVSQQDWQVAEM 224 (1194)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~~---~~~~~~yv~Q~d~~~~~l 224 (1194)
..+|+|+|++|++|++++|+|||||||||||++|+|.+++. +|+|.++|.++.... .++.++|++|++.+++.+
T Consensus 15 ~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~p~---~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~~~ 91 (258)
T PRK13548 15 RTLLDDVSLTLRPGEVVAILGPNGAGKSTLLRALSGELSPD---SGEVRLNGRPLADWSPAELARRRAVLPQHSSLSFPF 91 (258)
T ss_pred eeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CCEEEECCEEcccCCHHHhhhheEEEccCCcCCCCC
Confidence 35999999999999999999999999999999999998776 999999998765432 235699999998887889
Q ss_pred CHHHHHHHhhhccCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhccCcchhHHHHHHHHHhCCcccccccccCccC
Q 000997 225 TVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEML 304 (1194)
Q Consensus 225 TV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~k~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~ 304 (1194)
||+||+.+.....+.. . ......++.+++.+||.+..++.++
T Consensus 92 tv~e~l~~~~~~~~~~--~--------------------------------~~~~~~~~~~l~~~~l~~~~~~~~~---- 133 (258)
T PRK13548 92 TVEEVVAMGRAPHGLS--R--------------------------------AEDDALVAAALAQVDLAHLAGRDYP---- 133 (258)
T ss_pred CHHHHHHhhhcccCCC--c--------------------------------HHHHHHHHHHHHHcCCHhHhcCCcc----
Confidence 9999998753211100 0 0011236778999999877776654
Q ss_pred CCCChhhhhHHHHHHHHh------CCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeE
Q 000997 305 KGISGGQKKRLTTGELLV------GPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDV 378 (1194)
Q Consensus 305 ~~LSGGqkqRvsia~al~------~~~~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~v 378 (1194)
.|||||||||+||+||+ .+|++|+|||||+|||+.+...+.+.|+++++.. +++|+.++|+.+++..++|+|
T Consensus 134 -~LSgGe~qrv~la~al~~~~~~~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~-~~tiii~sH~~~~~~~~~d~i 211 (258)
T PRK13548 134 -QLSGGEQQRVQLARVLAQLWEPDGPPRWLLLDEPTSALDLAHQHHVLRLARQLAHER-GLAVIVVLHDLNLAARYADRI 211 (258)
T ss_pred -cCCHHHHHHHHHHHHHhcccccCCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhc-CCEEEEEECCHHHHHHhcCEE
Confidence 69999999999999999 5999999999999999999999999999987333 445666788899999999999
Q ss_pred EEEcCCeEEEecChhhHH
Q 000997 379 ILLSEGQIVYQGPRVSVL 396 (1194)
Q Consensus 379 ilL~~G~iv~~G~~~~~~ 396 (1194)
++|++|++++.|+.+++.
T Consensus 212 ~~l~~G~i~~~~~~~~~~ 229 (258)
T PRK13548 212 VLLHQGRLVADGTPAEVL 229 (258)
T ss_pred EEEECCEEEeeCCHHHHh
Confidence 999999999999887653
No 377
>PRK10575 iron-hydroxamate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.2e-34 Score=320.44 Aligned_cols=209 Identities=27% Similarity=0.375 Sum_probs=171.2
Q ss_pred eeeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCceeeEEEECCccCCCCC---CCceEEEEecCCCCCCCC
Q 000997 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV---PPRTSAYVSQQDWQVAEM 224 (1194)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~~---~~~~~~yv~Q~d~~~~~l 224 (1194)
+++|+|+|+++++|++++|+||||||||||+++|+|.+++. +|+|.++|.++.... .++.++|++|++.+++.+
T Consensus 24 ~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~~~~~~ 100 (265)
T PRK10575 24 RTLLHPLSLTFPAGKVTGLIGHNGSGKSTLLKMLGRHQPPS---EGEILLDAQPLESWSSKAFARKVAYLPQQLPAAEGM 100 (265)
T ss_pred EEEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCC---CCEEEECCEehhhCCHHHHhhheEEeccCCCCCCCc
Confidence 36999999999999999999999999999999999998776 999999998764432 235799999998888899
Q ss_pred CHHHHHHHhhhccCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhccCcchhHHHHHHHHHhCCcccccccccCccC
Q 000997 225 TVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEML 304 (1194)
Q Consensus 225 TV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~k~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~ 304 (1194)
||.||+.++..... .. . + ... ......++.+++.+||++..++.++
T Consensus 101 tv~e~l~~~~~~~~-~~-~-------------~-~~~--------------~~~~~~~~~~l~~~~l~~~~~~~~~---- 146 (265)
T PRK10575 101 TVRELVAIGRYPWH-GA-L-------------G-RFG--------------AADREKVEEAISLVGLKPLAHRLVD---- 146 (265)
T ss_pred cHHHHHHhCccccc-cc-c-------------c-CCC--------------HHHHHHHHHHHHHcCCHHHhcCCcc----
Confidence 99999987532100 00 0 0 000 0012246788999999876776654
Q ss_pred CCCChhhhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEcCC
Q 000997 305 KGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEG 384 (1194)
Q Consensus 305 ~~LSGGqkqRvsia~al~~~~~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~~G 384 (1194)
.|||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|+++++.. +++|+.++|..+++.+++|+|++|++|
T Consensus 147 -~LSgG~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~~~~~l~~l~~~~-~~tiii~sH~~~~i~~~~d~i~~l~~G 224 (265)
T PRK10575 147 -SLSGGERQRAWIAMLVAQDSRCLLLDEPTSALDIAHQVDVLALVHRLSQER-GLTVIAVLHDINMAARYCDYLVALRGG 224 (265)
T ss_pred -cCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhc-CCEEEEEeCCHHHHHHhCCEEEEEECC
Confidence 599999999999999999999999999999999999999999999987533 455666888899999999999999999
Q ss_pred eEEEecChhhH
Q 000997 385 QIVYQGPRVSV 395 (1194)
Q Consensus 385 ~iv~~G~~~~~ 395 (1194)
++++.|+.+++
T Consensus 225 ~i~~~~~~~~~ 235 (265)
T PRK10575 225 EMIAQGTPAEL 235 (265)
T ss_pred eEEEecCHHHh
Confidence 99999988765
No 378
>PRK10908 cell division protein FtsE; Provisional
Probab=100.00 E-value=2.2e-34 Score=314.54 Aligned_cols=196 Identities=22% Similarity=0.322 Sum_probs=164.2
Q ss_pred eeeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCceeeEEEECCccCCCCC------CCceEEEEecCCCCC
Q 000997 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV------PPRTSAYVSQQDWQV 221 (1194)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~~------~~~~~~yv~Q~d~~~ 221 (1194)
+++|+|+|++|++|++++|+||||||||||+++|+|.+++. +|+|.++|.++.... .++.++|++|++.++
T Consensus 15 ~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~i~~~~~~~~~~~~~~i~~~~q~~~~~ 91 (222)
T PRK10908 15 RQALQGVTFHMRPGEMAFLTGHSGAGKSTLLKLICGIERPS---AGKIWFSGHDITRLKNREVPFLRRQIGMIFQDHHLL 91 (222)
T ss_pred CeEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEEcccCChhHHHHHHhheEEEecCcccc
Confidence 36999999999999999999999999999999999998776 999999998775432 235799999999888
Q ss_pred CCCCHHHHHHHhhhccCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhccCcchhHHHHHHHHHhCCcccccccccC
Q 000997 222 AEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGD 301 (1194)
Q Consensus 222 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~k~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 301 (1194)
+.+||+||+.+.....+... .+....++.+++.+||.+..++.+
T Consensus 92 ~~~tv~~~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~-- 135 (222)
T PRK10908 92 MDRTVYDNVAIPLIIAGASG----------------------------------DDIRRRVSAALDKVGLLDKAKNFP-- 135 (222)
T ss_pred ccccHHHHHHhHHHhcCCCH----------------------------------HHHHHHHHHHHHHcCChhhhhCCc--
Confidence 99999999988643321100 001123567888999987666554
Q ss_pred ccCCCCChhhhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEE
Q 000997 302 EMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILL 381 (1194)
Q Consensus 302 ~~~~~LSGGqkqRvsia~al~~~~~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL 381 (1194)
..|||||||||+||+|++.+|++|+|||||+|||+.++..+.+.|+++.+. +++++.++|..+++..++|+|++|
T Consensus 136 ---~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~--~~tiii~sH~~~~~~~~~d~i~~l 210 (222)
T PRK10908 136 ---IQLSGGEQQRVGIARAVVNKPAVLLADEPTGNLDDALSEGILRLFEEFNRV--GVTVLMATHDIGLISRRSYRMLTL 210 (222)
T ss_pred ---hhCCHHHHHHHHHHHHHHcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHhCCEEEEE
Confidence 469999999999999999999999999999999999999999999998653 456667889999999999999999
Q ss_pred cCCeEE
Q 000997 382 SEGQIV 387 (1194)
Q Consensus 382 ~~G~iv 387 (1194)
++|+++
T Consensus 211 ~~G~i~ 216 (222)
T PRK10908 211 SDGHLH 216 (222)
T ss_pred ECCEEc
Confidence 999985
No 379
>PRK13640 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.5e-34 Score=322.54 Aligned_cols=207 Identities=26% Similarity=0.347 Sum_probs=169.5
Q ss_pred eeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCceeeEEEECCccCCCCC---CCceEEEEecCCC-CCCCC
Q 000997 149 TILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV---PPRTSAYVSQQDW-QVAEM 224 (1194)
Q Consensus 149 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~~---~~~~~~yv~Q~d~-~~~~l 224 (1194)
++|+|||++|++|++++|+||||||||||+++|+|.+++....+|+|+++|.++.... .++.++|++|++. .++.+
T Consensus 21 ~~l~~v~l~i~~Ge~~~I~G~nGaGKSTLl~~l~G~~~p~~g~~G~i~i~g~~~~~~~~~~~~~~ig~v~q~~~~~~~~~ 100 (282)
T PRK13640 21 PALNDISFSIPRGSWTALIGHNGSGKSTISKLINGLLLPDDNPNSKITVDGITLTAKTVWDIREKVGIVFQNPDNQFVGA 100 (282)
T ss_pred cceeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcccCCCCCCCcEEEECCEECCcCCHHHHHhheEEEEECHHHhhccC
Confidence 5999999999999999999999999999999999999875222499999999875432 2357999999974 57789
Q ss_pred CHHHHHHHhhhccCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhccCcchhHHHHHHHHHhCCcccccccccCccC
Q 000997 225 TVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEML 304 (1194)
Q Consensus 225 TV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~k~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~ 304 (1194)
||.||+.|..+..+.. ..+...+++.+++.+||.+..++.+
T Consensus 101 tv~enl~~~~~~~~~~----------------------------------~~~~~~~~~~~l~~~~L~~~~~~~~----- 141 (282)
T PRK13640 101 TVGDDVAFGLENRAVP----------------------------------RPEMIKIVRDVLADVGMLDYIDSEP----- 141 (282)
T ss_pred CHHHHHHhhHHhCCCC----------------------------------HHHHHHHHHHHHHHCCChhHhcCCc-----
Confidence 9999998754322100 0001234677899999987766654
Q ss_pred CCCChhhhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEcCC
Q 000997 305 KGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEG 384 (1194)
Q Consensus 305 ~~LSGGqkqRvsia~al~~~~~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~~G 384 (1194)
+.|||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|+++++.. +++|+.++|..+++ ..+|++++|++|
T Consensus 142 ~~LS~G~~qrv~laral~~~P~llllDEPt~gLD~~~~~~l~~~l~~l~~~~-g~tvli~tH~~~~~-~~~d~i~~l~~G 219 (282)
T PRK13640 142 ANLSGGQKQRVAIAGILAVEPKIIILDESTSMLDPAGKEQILKLIRKLKKKN-NLTVISITHDIDEA-NMADQVLVLDDG 219 (282)
T ss_pred ccCCHHHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhc-CCEEEEEecCHHHH-HhCCEEEEEECC
Confidence 5799999999999999999999999999999999999999999999987543 44555577777777 579999999999
Q ss_pred eEEEecChhhHH
Q 000997 385 QIVYQGPRVSVL 396 (1194)
Q Consensus 385 ~iv~~G~~~~~~ 396 (1194)
++++.|+++++.
T Consensus 220 ~i~~~g~~~~~~ 231 (282)
T PRK13640 220 KLLAQGSPVEIF 231 (282)
T ss_pred EEEEeCCHHHHh
Confidence 999999988764
No 380
>PRK14251 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.7e-34 Score=317.18 Aligned_cols=203 Identities=25% Similarity=0.338 Sum_probs=164.6
Q ss_pred ceEEeeeeeEEEeCCcEEEEEccCCCChHHHHhhhcCCCCC--C-eeEEEEEEcCccCCh-----hcccceeeEeecCCC
Q 000997 841 RLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTG--G-IIEGDIYISGYPKRQ-----ETFARISGYCEQNDI 912 (1194)
Q Consensus 841 ~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~--~-~~~G~i~i~g~~~~~-----~~~~~~~gyv~Q~~~ 912 (1194)
.+.+|+|+|+++++||++||+|+||||||||+++|+|..++ . +.+|+|.++|.++.. ...++.++|++|++.
T Consensus 16 ~~~~l~~~sl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~~~~G~v~i~g~~~~~~~~~~~~~~~~i~~~~q~~~ 95 (251)
T PRK14251 16 NYEALHGISLDFEEKELTALIGPSGCGKSTFLRCLNRMNDDIENIKITGEIKFEGQNIYGSKMDLVELRKEVGMVFQQPT 95 (251)
T ss_pred CeeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhhccccccCCCcceEEEECCEEcccccchHHHhhccEEEEecCCc
Confidence 35799999999999999999999999999999999997641 1 258999999987532 234567999999988
Q ss_pred CCCCCcHHHHHHHHhhhcCCCcCcHHHHHHHHHHHHHHcCCCc----ccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCC
Q 000997 913 HSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTS----LSGALIGLPGINGLSTEQRKRLTIAVELVANPS 988 (1194)
Q Consensus 913 ~~~~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~----~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~ 988 (1194)
+++ .|++||+.+....... ...+...+.++++++.+++.. ..+. .+.+||||||||++|||+|+.+|+
T Consensus 96 ~~~-~tv~enl~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~~~~~~~~-----~~~~LS~Gq~qr~~laral~~~p~ 167 (251)
T PRK14251 96 PFP-FSVYDNVAYGLKIAGV--KDKELIDQRVEESLKQAAIWKETKDNLDR-----NAQAFSGGQQQRICIARALAVRPK 167 (251)
T ss_pred cCC-CcHHHHHHHHHHHcCC--CCHHHHHHHHHHHHHHcCCCcchHHHhcc-----ChhhCCHHHHHHHHHHHHHhcCCC
Confidence 776 7999999876433211 112223345778888888842 2222 236899999999999999999999
Q ss_pred EEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCeEEEEccCcEEEEeCCC
Q 000997 989 IVFMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1194)
Q Consensus 989 illLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~ 1054 (1194)
+|+|||||+|||+.++..+.+.|+++. ++.|||++||+++ .+.+.+|++++|+ +|+++..|+.
T Consensus 168 llllDEP~~~LD~~~~~~l~~~l~~~~-~~~tiiiisH~~~-~~~~~~d~i~~l~-~G~i~~~~~~ 230 (251)
T PRK14251 168 VVLLDEPTSALDPISSSEIEETLMELK-HQYTFIMVTHNLQ-QAGRISDQTAFLM-NGDLIEAGPT 230 (251)
T ss_pred EEEecCCCccCCHHHHHHHHHHHHHHH-cCCeEEEEECCHH-HHHhhcCEEEEEE-CCEEEEeCCH
Confidence 999999999999999999999999985 4799999999986 4677899999998 5789888874
No 381
>PRK11176 lipid transporter ATP-binding/permease protein; Provisional
Probab=100.00 E-value=2.1e-34 Score=359.24 Aligned_cols=209 Identities=22% Similarity=0.370 Sum_probs=166.1
Q ss_pred eeeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCceeeEEEECCccCCCCCC---CceEEEEecCCCCCCCC
Q 000997 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVP---PRTSAYVSQQDWQVAEM 224 (1194)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~l 224 (1194)
.++|+|+|++|+||+.++|+||||||||||+++|+|.++|. +|+|.+||.++++... ++.++||+|++.+|+ .
T Consensus 356 ~~il~~i~l~i~~G~~~aIvG~sGsGKSTLl~ll~gl~~p~---~G~I~i~g~~i~~~~~~~~~~~i~~v~Q~~~lf~-~ 431 (582)
T PRK11176 356 VPALRNINFKIPAGKTVALVGRSGSGKSTIANLLTRFYDID---EGEILLDGHDLRDYTLASLRNQVALVSQNVHLFN-D 431 (582)
T ss_pred CccccCceEEeCCCCEEEEECCCCCCHHHHHHHHHhccCCC---CceEEECCEEhhhcCHHHHHhhceEEccCceeec-c
Confidence 46999999999999999999999999999999999999886 9999999999876643 578999999998776 6
Q ss_pred CHHHHHHHhhhccCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhccCcchhHHHHHHHHHhCCcccccccccCccC
Q 000997 225 TVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEML 304 (1194)
Q Consensus 225 TV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~k~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~ 304 (1194)
|++|||.++..- ....+.+.+++ +.+ ..++.++ .|++..||.+|+.+
T Consensus 432 Ti~~Ni~~~~~~---~~~~~~i~~al------------------~~~---------~l~~~i~--~lp~Gldt~ig~~g- 478 (582)
T PRK11176 432 TIANNIAYARTE---QYSREQIEEAA------------------RMA---------YAMDFIN--KMDNGLDTVIGENG- 478 (582)
T ss_pred hHHHHHhcCCCC---CCCHHHHHHHH------------------HHh---------CcHHHHH--hcccccCceeCCCC-
Confidence 999999875210 00111111111 000 0111111 26778899999754
Q ss_pred CCCChhhhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEcCC
Q 000997 305 KGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEG 384 (1194)
Q Consensus 305 ~~LSGGqkqRvsia~al~~~~~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~~G 384 (1194)
+.||||||||++|||||+.+|+||+||||||+||+.++..+.+.|+++.. ++|+|+ ++|.. +..+.||+|++|++|
T Consensus 479 ~~LSGGqrQRi~LARall~~~~ililDEptsaLD~~t~~~i~~~l~~~~~--~~tvI~-VtHr~-~~~~~~D~Ii~l~~g 554 (582)
T PRK11176 479 VLLSGGQRQRIAIARALLRDSPILILDEATSALDTESERAIQAALDELQK--NRTSLV-IAHRL-STIEKADEILVVEDG 554 (582)
T ss_pred CcCCHHHHHHHHHHHHHHhCCCEEEEECccccCCHHHHHHHHHHHHHHhC--CCEEEE-Eecch-HHHHhCCEEEEEECC
Confidence 57999999999999999999999999999999999999999999998743 345554 55555 466789999999999
Q ss_pred eEEEecChhhHHH
Q 000997 385 QIVYQGPRVSVLD 397 (1194)
Q Consensus 385 ~iv~~G~~~~~~~ 397 (1194)
+++..|+++++.+
T Consensus 555 ~i~e~g~~~~l~~ 567 (582)
T PRK11176 555 EIVERGTHAELLA 567 (582)
T ss_pred EEEEeCCHHHHHh
Confidence 9999999988864
No 382
>TIGR02769 nickel_nikE nickel import ATP-binding protein NikE. This family represents the NikE subunit of a multisubunit nickel import ABC transporter complex. Nickel, once imported, may be used in urease and in certain classes of hydrogenase and superoxide dismutase.
Probab=100.00 E-value=4.1e-34 Score=320.49 Aligned_cols=207 Identities=23% Similarity=0.318 Sum_probs=170.5
Q ss_pred eeeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCceeeEEEECCccCCCCC------CCceEEEEecCC--C
Q 000997 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV------PPRTSAYVSQQD--W 219 (1194)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~~------~~~~~~yv~Q~d--~ 219 (1194)
+.+|+|+|++|++||+++|+|||||||||||++|+|.+++. +|+|+++|.++.... .++.++|++|++ .
T Consensus 24 ~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~~~~i~~v~q~~~~~ 100 (265)
T TIGR02769 24 APVLTNVSLSIEEGETVGLLGRSGCGKSTLARLLLGLEKPA---QGTVSFRGQDLYQLDRKQRRAFRRDVQLVFQDSPSA 100 (265)
T ss_pred eEEeeCceeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEEccccCHHHHHHHhhceEEEecChhhh
Confidence 56999999999999999999999999999999999998876 999999998875432 235699999996 4
Q ss_pred CCCCCCHHHHHHHhhhccCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhccCcchhHHHHHHHHHhCCc-cccccc
Q 000997 220 QVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLD-TCADTL 298 (1194)
Q Consensus 220 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~k~~~~~~~~~~~~~~~~l~~lgL~-~~~dt~ 298 (1194)
+++.+||+||+.+....... .. + ......++.+++.+||. ...+..
T Consensus 101 ~~~~~tv~~~l~~~~~~~~~------------------~~--~-------------~~~~~~~~~~l~~~gl~~~~~~~~ 147 (265)
T TIGR02769 101 VNPRMTVRQIIGEPLRHLTS------------------LD--E-------------SEQKARIAELLDMVGLRSEDADKL 147 (265)
T ss_pred cCCCCCHHHHHHHHHHHhcC------------------CC--H-------------HHHHHHHHHHHHHcCCChhhhhCC
Confidence 56789999999765321100 00 0 00122467789999996 555554
Q ss_pred ccCccCCCCChhhhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeE
Q 000997 299 VGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDV 378 (1194)
Q Consensus 299 vg~~~~~~LSGGqkqRvsia~al~~~~~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~v 378 (1194)
+ +.|||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|+++.+.. +++|+.++|..+.+.+++|++
T Consensus 148 ~-----~~LSgGe~qrv~laral~~~p~illLDEPt~~LD~~~~~~l~~~l~~~~~~~-g~tiiivsH~~~~~~~~~d~i 221 (265)
T TIGR02769 148 P-----RQLSGGQLQRINIARALAVKPKLIVLDEAVSNLDMVLQAVILELLRKLQQAF-GTAYLFITHDLRLVQSFCQRV 221 (265)
T ss_pred h-----hhCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhc-CcEEEEEeCCHHHHHHHhcEE
Confidence 4 4699999999999999999999999999999999999999999999987533 455666889999999999999
Q ss_pred EEEcCCeEEEecChhhHH
Q 000997 379 ILLSEGQIVYQGPRVSVL 396 (1194)
Q Consensus 379 ilL~~G~iv~~G~~~~~~ 396 (1194)
++|++|++++.|+.+++.
T Consensus 222 ~~l~~G~i~~~g~~~~~~ 239 (265)
T TIGR02769 222 AVMDKGQIVEECDVAQLL 239 (265)
T ss_pred EEEeCCEEEEECCHHHHc
Confidence 999999999999988764
No 383
>PRK14248 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.1e-34 Score=322.20 Aligned_cols=218 Identities=20% Similarity=0.280 Sum_probs=170.7
Q ss_pred eEeecceeeeecccccccccccccceEEeeeeeEEEeCCcEEEEEccCCCChHHHHhhhcCCCC--C-CeeEEEEEEcCc
Q 000997 817 MAFGNINYFVDVPVELKQEGVLEDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKT--G-GIIEGDIYISGY 893 (1194)
Q Consensus 817 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~--~-~~~~G~i~i~g~ 893 (1194)
+.++|+++.+ +++.+|+|+|+++++||++||+|+||||||||+++|+|... + .+.+|+|.++|.
T Consensus 22 l~~~~l~~~~-------------~~~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~ 88 (268)
T PRK14248 22 LEVKDLSIYY-------------GEKRAVNDISMDIEKHAVTALIGPSGCGKSTFLRSINRMNDLIPSARSEGEILYEGL 88 (268)
T ss_pred EEEEEEEEEe-------------CCceeeeceEEEEcCCCEEEEECCCCCCHHHHHHHHHhcccccCCCCCceEEEECCE
Confidence 5666766544 23569999999999999999999999999999999999642 1 135899999998
Q ss_pred cCCh-----hcccceeeEeecCCCCCCCCcHHHHHHHHhhhcCCCcCcHHHHHHHHHHHHHHcCCCcccCCcccCCCCCC
Q 000997 894 PKRQ-----ETFARISGYCEQNDIHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGING 968 (1194)
Q Consensus 894 ~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~ 968 (1194)
++.. ..+++.++|++|++.+++. |++||+.+...... .......++.++++++.+++......... ..+..
T Consensus 89 ~i~~~~~~~~~~~~~i~~v~q~~~~~~~-tv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-~~~~~ 164 (268)
T PRK14248 89 NILDSNINVVNLRREIGMVFQKPNPFPK-SIYNNITHALKYAG--ERRKSVLDEIVEESLTKAALWDEVKDRLH-SSALS 164 (268)
T ss_pred EcccccccHHHHhccEEEEecCCccCcc-cHHHHHHHHHHhcC--CCcHHHHHHHHHHHHHHcCCCcchHHHHh-cCccc
Confidence 7632 2345679999999988875 99999987643221 11122233456778888887421101111 12468
Q ss_pred CCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCeEEEEccCcEE
Q 000997 969 LSTEQRKRLTIAVELVANPSIVFMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGEL 1048 (1194)
Q Consensus 969 LSgGqrqrl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~ 1048 (1194)
||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++++ +.|||+++|+++ .+.+.+|++++|+ +|++
T Consensus 165 LSgGq~qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~-~~tiii~tH~~~-~~~~~~d~v~~l~-~G~i 241 (268)
T PRK14248 165 LSGGQQQRLCIARTLAMKPAVLLLDEPASALDPISNAKIEELITELKE-EYSIIIVTHNMQ-QALRVSDRTAFFL-NGDL 241 (268)
T ss_pred CCHHHHHHHHHHHHHhCCCCEEEEcCCCcccCHHHHHHHHHHHHHHhc-CCEEEEEEeCHH-HHHHhCCEEEEEE-CCEE
Confidence 999999999999999999999999999999999999999999999865 689999999976 4677899999998 5799
Q ss_pred EEeCCC
Q 000997 1049 IYAGPL 1054 (1194)
Q Consensus 1049 ~~~g~~ 1054 (1194)
++.|+.
T Consensus 242 ~~~~~~ 247 (268)
T PRK14248 242 VEYDQT 247 (268)
T ss_pred EEeCCH
Confidence 998874
No 384
>PRK13645 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4e-34 Score=324.49 Aligned_cols=205 Identities=20% Similarity=0.311 Sum_probs=166.7
Q ss_pred eeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCceeeEEEECCccCCC----C----CCCceEEEEecCCC-
Q 000997 149 TILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKE----F----VPPRTSAYVSQQDW- 219 (1194)
Q Consensus 149 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~----~----~~~~~~~yv~Q~d~- 219 (1194)
.+|+|+|++|++|++++|+|||||||||||++|+|.+++. +|+|.++|.++.. . ..++.++|++|++.
T Consensus 25 ~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~~~~~~i~~v~q~~~~ 101 (289)
T PRK13645 25 KALNNTSLTFKKNKVTCVIGTTGSGKSTMIQLTNGLIISE---TGQTIVGDYAIPANLKKIKEVKRLRKEIGLVFQFPEY 101 (289)
T ss_pred ceeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CceEEECCEEccccccccccHHHHhccEEEEEeCcch
Confidence 5999999999999999999999999999999999999776 8999999987642 1 12457999999974
Q ss_pred CCCCCCHHHHHHHhhhccCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhccCcchhHHHHHHHHHhCCc-cccccc
Q 000997 220 QVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLD-TCADTL 298 (1194)
Q Consensus 220 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~k~~~~~~~~~~~~~~~~l~~lgL~-~~~dt~ 298 (1194)
.+...||+||+.|+....+.. . .+....++.+++.+||+ +..++.
T Consensus 102 ~~~~~tv~enl~~~~~~~~~~--~--------------------------------~~~~~~~~~ll~~~~L~~~~~~~~ 147 (289)
T PRK13645 102 QLFQETIEKDIAFGPVNLGEN--K--------------------------------QEAYKKVPELLKLVQLPEDYVKRS 147 (289)
T ss_pred hhhhhHHHHHHHHHHHHcCCC--H--------------------------------HHHHHHHHHHHHHcCCChhHhcCC
Confidence 233469999998854321100 0 00012366788899995 455554
Q ss_pred ccCccCCCCChhhhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeE
Q 000997 299 VGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDV 378 (1194)
Q Consensus 299 vg~~~~~~LSGGqkqRvsia~al~~~~~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~v 378 (1194)
+ ..|||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|+++.+.. +++|+.++|..+++.+++|+|
T Consensus 148 ~-----~~LS~Gq~qrv~laral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~~~~~-~~tiiiisH~~~~~~~~~d~i 221 (289)
T PRK13645 148 P-----FELSGGQKRRVALAGIIAMDGNTLVLDEPTGGLDPKGEEDFINLFERLNKEY-KKRIIMVTHNMDQVLRIADEV 221 (289)
T ss_pred h-----hhCCHHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhc-CCEEEEEecCHHHHHHhCCEE
Confidence 4 4699999999999999999999999999999999999999999999987533 455666888889999999999
Q ss_pred EEEcCCeEEEecChhhHH
Q 000997 379 ILLSEGQIVYQGPRVSVL 396 (1194)
Q Consensus 379 ilL~~G~iv~~G~~~~~~ 396 (1194)
++|++|++++.|+.+++.
T Consensus 222 ~~l~~G~i~~~g~~~~~~ 239 (289)
T PRK13645 222 IVMHEGKVISIGSPFEIF 239 (289)
T ss_pred EEEECCEEEEeCCHHHHh
Confidence 999999999999987763
No 385
>PRK14254 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.7e-34 Score=320.29 Aligned_cols=213 Identities=23% Similarity=0.308 Sum_probs=170.8
Q ss_pred eeEeecceeeeecccccccccccccceEEeeeeeEEEeCCcEEEEEccCCCChHHHHhhhcCCCCC---CeeEEEEEEcC
Q 000997 816 SMAFGNINYFVDVPVELKQEGVLEDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTG---GIIEGDIYISG 892 (1194)
Q Consensus 816 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~---~~~~G~i~i~g 892 (1194)
.+.++++++.+ +++.+|+|+||+|++||++||+||||||||||+++|+|...+ .+.+|+|.++|
T Consensus 39 ~l~i~~l~~~~-------------~~~~il~~is~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~~~p~~G~I~i~G 105 (285)
T PRK14254 39 VIEARDLNVFY-------------GDEQALDDVSMDIPENQVTAMIGPSGCGKSTFLRCINRMNDLIDAARVEGELTFRG 105 (285)
T ss_pred eEEEEEEEEEE-------------CCEeeEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccCCcccCCCCceEEEECC
Confidence 45666766544 335799999999999999999999999999999999998642 13589999999
Q ss_pred ccCCh-----hcccceeeEeecCCCCCCCCcHHHHHHHHhhhcCCCcCcHHHHHHHHHHHHHHcCCCc----ccCCcccC
Q 000997 893 YPKRQ-----ETFARISGYCEQNDIHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTS----LSGALIGL 963 (1194)
Q Consensus 893 ~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~----~~~~~~~~ 963 (1194)
.++.. ...++.++|++|++.+++. |+.||+.+....+. ... ...+.++++++.+++.. ..+..
T Consensus 106 ~~i~~~~~~~~~~~~~i~~v~q~~~l~~~-tv~enl~~~~~~~~---~~~-~~~~~~~~~l~~~~l~~~i~~~~~~~--- 177 (285)
T PRK14254 106 KNVYDADVDPVALRRRIGMVFQKPNPFPK-SIYDNVAYGLKIQG---YDG-DIDERVEESLRRAALWDEVKDQLDSS--- 177 (285)
T ss_pred EEccccccchHhhhccEEEEecCCccCcC-CHHHHHHHHHHHcC---CcH-HHHHHHHHHHHHcCCCchhHHHHhCC---
Confidence 87532 2346789999999888775 99999988654332 111 23456788899888853 22322
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCeEE-EE
Q 000997 964 PGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELL-FM 1042 (1194)
Q Consensus 964 ~~~~~LSgGqrqrl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~~d~~~-~l 1042 (1194)
+..|||||||||+|||+|+.+|+||||||||+|||+.+...+.+.|+++++ +.|||+++|+++ .+...+|+++ +|
T Consensus 178 --~~~LSgGe~qrv~LAraL~~~p~lLLLDEPts~LD~~~~~~l~~~L~~~~~-~~tiii~tH~~~-~i~~~~dri~v~l 253 (285)
T PRK14254 178 --GLDLSGGQQQRLCIARAIAPDPEVILMDEPASALDPVATSKIEDLIEELAE-EYTVVIVTHNMQ-QAARISDKTAVFL 253 (285)
T ss_pred --cccCCHHHHHHHHHHHHHHcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHhc-CCEEEEEeCCHH-HHHhhcCEEEEEe
Confidence 358999999999999999999999999999999999999999999999976 489999999976 4667799975 45
Q ss_pred ccCcEEEEeCCC
Q 000997 1043 KRGGELIYAGPL 1054 (1194)
Q Consensus 1043 ~~gG~~~~~g~~ 1054 (1194)
+ +|+++..|+.
T Consensus 254 ~-~G~i~~~g~~ 264 (285)
T PRK14254 254 T-GGELVEFDDT 264 (285)
T ss_pred e-CCEEEEeCCH
Confidence 6 5889988874
No 386
>PRK14237 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.3e-33 Score=316.71 Aligned_cols=211 Identities=22% Similarity=0.275 Sum_probs=168.8
Q ss_pred eeeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCC--CceeeEEEECCccCCCC-----CCCceEEEEecCCCC
Q 000997 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHH--LQVSGKITYNGHGFKEF-----VPPRTSAYVSQQDWQ 220 (1194)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~--~~~~G~i~~~G~~~~~~-----~~~~~~~yv~Q~d~~ 220 (1194)
+++|+|+|+++++||+++|+|||||||||||++|+|.+++. .+.+|+|.++|.++... ..++.++|++|++.+
T Consensus 33 ~~il~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~v~q~~~~ 112 (267)
T PRK14237 33 KEAIKGIDMQFEKNKITALIGPSGSGKSTYLRSLNRMNDTIDIARVTGQILYRGIDINRKEINVYEMRKHIGMVFQRPNP 112 (267)
T ss_pred eeeEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhccCccCCCCcceEEEECCEEcccccCChHHHhcceEEEecCCcc
Confidence 35999999999999999999999999999999999998642 23599999999887532 124579999999887
Q ss_pred CCCCCHHHHHHHhhhccCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhccCcchhHHHHHHHHHhCCccccccccc
Q 000997 221 VAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVG 300 (1194)
Q Consensus 221 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~k~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg 300 (1194)
++ .||+||+.++....+... . ......+.++++.+||.+..+...
T Consensus 113 ~~-~tv~eni~~~~~~~~~~~-------------------~--------------~~~~~~~~~~l~~~~l~~~i~~~~- 157 (267)
T PRK14237 113 FA-KSIYENITFALERAGVKD-------------------K--------------KVLDEIVETSLKQAALWDQVKDDL- 157 (267)
T ss_pred cc-ccHHHHHHhHHHhcCCCC-------------------H--------------HHHHHHHHHHHHHcCCCchhhhhh-
Confidence 77 699999988643211000 0 001123667788888864322222
Q ss_pred CccCCCCChhhhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEE
Q 000997 301 DEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVIL 380 (1194)
Q Consensus 301 ~~~~~~LSGGqkqRvsia~al~~~~~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vil 380 (1194)
+...+.|||||||||+|||||+.+|++++|||||+|||+.+...+.+.|+++.. + ++|+.++|..+++.++||++++
T Consensus 158 ~~~~~~LS~G~~qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~--~-~tiii~tH~~~~~~~~~d~i~~ 234 (267)
T PRK14237 158 HKSALTLSGGQQQRLCIARAIAVKPDILLMDEPASALDPISTMQLEETMFELKK--N-YTIIIVTHNMQQAARASDYTAF 234 (267)
T ss_pred cCCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhc--C-CEEEEEecCHHHHHHhcCEEEE
Confidence 234567999999999999999999999999999999999999999999998853 3 5566678888899999999999
Q ss_pred EcCCeEEEecChhhHH
Q 000997 381 LSEGQIVYQGPRVSVL 396 (1194)
Q Consensus 381 L~~G~iv~~G~~~~~~ 396 (1194)
|++|++++.|+.+++.
T Consensus 235 l~~G~i~~~g~~~~~~ 250 (267)
T PRK14237 235 FYLGDLIEYDKTRNIF 250 (267)
T ss_pred EECCEEEEeCCHHHHh
Confidence 9999999999988763
No 387
>cd03225 ABC_cobalt_CbiO_domain1 Domain I of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. This ABC transport system of the CbiMNQO family is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most of cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=100.00 E-value=2.2e-34 Score=312.12 Aligned_cols=194 Identities=31% Similarity=0.447 Sum_probs=160.7
Q ss_pred eeeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCceeeEEEECCccCCCCC---CCceEEEEecCCC-CCCC
Q 000997 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV---PPRTSAYVSQQDW-QVAE 223 (1194)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~~---~~~~~~yv~Q~d~-~~~~ 223 (1194)
+++|+|+|+++++|++++|+|||||||||||++|+|.+++. +|+|.++|.++.... .++.++|++|++. .++.
T Consensus 14 ~~il~~vs~~i~~G~~~~l~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~~~ 90 (211)
T cd03225 14 RPALDDISLTIKKGEFVLIVGPNGSGKSTLLRLLNGLLGPT---SGEVLVDGKDLTKLSLKELRRKVGLVFQNPDDQFFG 90 (211)
T ss_pred eeeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCCCC---CceEEECCEEcccCCHHHHHhhceEEecChhhhcCC
Confidence 46999999999999999999999999999999999998776 999999998775432 2357999999974 4677
Q ss_pred CCHHHHHHHhhhccCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhccCcchhHHHHHHHHHhCCcccccccccCcc
Q 000997 224 MTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEM 303 (1194)
Q Consensus 224 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~k~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~ 303 (1194)
+||+||+.++....+... ......++.+++.+||++..++.+
T Consensus 91 ~t~~~~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~---- 132 (211)
T cd03225 91 PTVEEEVAFGLENLGLPE----------------------------------EEIEERVEEALELVGLEGLRDRSP---- 132 (211)
T ss_pred CcHHHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCcHhhhcCCc----
Confidence 899999987543211000 001123677889999987666655
Q ss_pred CCCCChhhhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEcC
Q 000997 304 LKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSE 383 (1194)
Q Consensus 304 ~~~LSGGqkqRvsia~al~~~~~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~~ 383 (1194)
..|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++++. +++|+.++|..+++..++|+|++|++
T Consensus 133 -~~LSgG~~qrv~laral~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~--~~tvi~~sH~~~~~~~~~d~i~~l~~ 209 (211)
T cd03225 133 -FTLSGGQKQRVAIAGVLAMDPDILLLDEPTAGLDPAGRRELLELLKKLKAE--GKTIIIVTHDLDLLLELADRVIVLED 209 (211)
T ss_pred -ccCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHc--CCEEEEEeCCHHHHHHhCCEEEEEeC
Confidence 469999999999999999999999999999999999999999999998753 45666688889999999999999999
Q ss_pred Ce
Q 000997 384 GQ 385 (1194)
Q Consensus 384 G~ 385 (1194)
|+
T Consensus 210 G~ 211 (211)
T cd03225 210 GK 211 (211)
T ss_pred CC
Confidence 85
No 388
>cd03230 ABC_DR_subfamily_A This family of ATP-binding proteins belongs to a multisubunit transporter involved in drug resistance (BcrA and DrrA), nodulation, lipid transport, and lantibiotic immunity. In bacteria and archaea, these transporters usually include an ATP-binding protein and one or two integral membrane proteins. Eukaryote systems of the ABCA subfamily display ABC domains that are quite similar to this family. The ATP-binding domain shows the highest similarity between all members of the ABC transporter family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.1e-34 Score=301.71 Aligned_cols=157 Identities=29% Similarity=0.447 Sum_probs=142.0
Q ss_pred eEEeeeeeEEEeCCcEEEEEccCCCChHHHHhhhcCCCCCCeeEEEEEEcCccCCh--hcccceeeEeecCCCCCCCCcH
Q 000997 842 LQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ--ETFARISGYCEQNDIHSPGLTV 919 (1194)
Q Consensus 842 ~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~--~~~~~~~gyv~Q~~~~~~~lTv 919 (1194)
..+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+... ..+++.++|++|++.+++.+|+
T Consensus 13 ~~~l~~~~~~i~~Ge~~~i~G~nGsGKStLl~~l~G~~~--~~~G~i~~~g~~~~~~~~~~~~~i~~~~q~~~~~~~~tv 90 (173)
T cd03230 13 KTALDDISLTVEKGEIYGLLGPNGAGKTTLIKIILGLLK--PDSGEIKVLGKDIKKEPEEVKRRIGYLPEEPSLYENLTV 90 (173)
T ss_pred eeeeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCCeEEEECCEEcccchHhhhccEEEEecCCccccCCcH
Confidence 469999999999999999999999999999999999876 458999999987642 2345679999999988888999
Q ss_pred HHHHHHHhhhcCCCcCcHHHHHHHHHHHHHHcCCCcccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCC
Q 000997 920 LESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSGL 999 (1194)
Q Consensus 920 ~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEPTsgL 999 (1194)
+||+. ||||||||++|||+|+.+|++|+|||||+||
T Consensus 91 ~~~~~--------------------------------------------LS~G~~qrv~laral~~~p~illlDEPt~~L 126 (173)
T cd03230 91 RENLK--------------------------------------------LSGGMKQRLALAQALLHDPELLILDEPTSGL 126 (173)
T ss_pred HHHhh--------------------------------------------cCHHHHHHHHHHHHHHcCCCEEEEeCCccCC
Confidence 99873 8999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCeEEEEccC
Q 000997 1000 DARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRG 1045 (1194)
Q Consensus 1000 D~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~g 1045 (1194)
|+.++..+.+.|++++++|.|||+++|+++ .+.+.+|++++|++|
T Consensus 127 D~~~~~~l~~~l~~~~~~g~tiii~th~~~-~~~~~~d~i~~l~~g 171 (173)
T cd03230 127 DPESRREFWELLRELKKEGKTILLSSHILE-EAERLCDRVAILNNG 171 (173)
T ss_pred CHHHHHHHHHHHHHHHHCCCEEEEECCCHH-HHHHhCCEEEEEeCC
Confidence 999999999999999877999999999976 466789999999864
No 389
>PRK13649 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.8e-34 Score=322.70 Aligned_cols=205 Identities=21% Similarity=0.300 Sum_probs=167.0
Q ss_pred eeeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCceeeEEEECCccCCCCC-------CCceEEEEecCCC-
Q 000997 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV-------PPRTSAYVSQQDW- 219 (1194)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~~-------~~~~~~yv~Q~d~- 219 (1194)
.++|+|+|++|++|++++|+|||||||||||++|+|.++|. +|+|.++|.++.... .++.++|++|++.
T Consensus 20 ~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~~~~~i~~~~q~~~~ 96 (280)
T PRK13649 20 GRALFDVNLTIEDGSYTAFIGHTGSGKSTIMQLLNGLHVPT---QGSVRVDDTLITSTSKNKDIKQIRKKVGLVFQFPES 96 (280)
T ss_pred cceeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEEccccccccCHHHHHhheEEEeeChhh
Confidence 35999999999999999999999999999999999998876 999999998875421 2356999999962
Q ss_pred CCCCCCHHHHHHHhhhccCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhccCcchhHHHHHHHHHhCCcc-ccccc
Q 000997 220 QVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDT-CADTL 298 (1194)
Q Consensus 220 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~k~~~~~~~~~~~~~~~~l~~lgL~~-~~dt~ 298 (1194)
.+...||+||+.|.....+... .+....++.+++.+||.. ..+..
T Consensus 97 ~~~~~tv~e~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~ 142 (280)
T PRK13649 97 QLFEETVLKDVAFGPQNFGVSQ----------------------------------EEAEALAREKLALVGISESLFEKN 142 (280)
T ss_pred hhccccHHHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCCChhhhhCC
Confidence 2334799999987543221100 001123677888999973 44554
Q ss_pred ccCccCCCCChhhhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeE
Q 000997 299 VGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDV 378 (1194)
Q Consensus 299 vg~~~~~~LSGGqkqRvsia~al~~~~~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~v 378 (1194)
+ +.|||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|+++++. +++|+.++|..+++.+++|++
T Consensus 143 ~-----~~LSgG~~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~--~~tiiivsH~~~~~~~~~d~i 215 (280)
T PRK13649 143 P-----FELSGGQMRRVAIAGILAMEPKILVLDEPTAGLDPKGRKELMTLFKKLHQS--GMTIVLVTHLMDDVANYADFV 215 (280)
T ss_pred c-----ccCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHC--CCEEEEEeccHHHHHHhCCEE
Confidence 4 469999999999999999999999999999999999999999999998652 455666788888999999999
Q ss_pred EEEcCCeEEEecChhhHH
Q 000997 379 ILLSEGQIVYQGPRVSVL 396 (1194)
Q Consensus 379 ilL~~G~iv~~G~~~~~~ 396 (1194)
++|++|++++.|+.+++.
T Consensus 216 ~~l~~G~i~~~g~~~~~~ 233 (280)
T PRK13649 216 YVLEKGKLVLSGKPKDIF 233 (280)
T ss_pred EEEECCEEEEeCCHHHHh
Confidence 999999999999988763
No 390
>TIGR02633 xylG D-xylose ABC transporter, ATP-binding protein. Several bacterial species have enzymes xylose isomerase and xylulokinase enzymes for xylose utilization. Members of this protein family are the ATP-binding cassette (ABC) subunit of the known or predicted high-affinity xylose ABC transporter for xylose import. These genes, which closely resemble other sugar transport ABC transporter genes, typically are encoded near xylose utilization enzymes and regulatory proteins. Note that this form of the transporter contains two copies of the ABC transporter domain (pfam00005).
Probab=100.00 E-value=3.3e-34 Score=350.36 Aligned_cols=210 Identities=22% Similarity=0.370 Sum_probs=173.1
Q ss_pred cceEEeeeeeEEEeCCcEEEEEccCCCChHHHHhhhcCCCCCCeeEEEEEEcCccCChh----cccceeeEeecCCCCCC
Q 000997 840 DRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQE----TFARISGYCEQNDIHSP 915 (1194)
Q Consensus 840 ~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~----~~~~~~gyv~Q~~~~~~ 915 (1194)
+++.+|+||||++++||++||+||||||||||+++|+|..++++.+|+|.++|.++... ..++.+|||+|++.+++
T Consensus 12 ~~~~il~~isl~i~~Ge~~~liG~nGsGKSTLl~~i~G~~~~~~~~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~ 91 (500)
T TIGR02633 12 GGVKALDGIDLEVRPGECVGLCGENGAGKSTLMKILSGVYPHGTWDGEIYWSGSPLKASNIRDTERAGIVIIHQELTLVP 91 (500)
T ss_pred CCeEeecceEEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCCCCeEEEECCEECCCCCHHHHHhCCEEEEeeccccCC
Confidence 34579999999999999999999999999999999999865323589999999876431 12456999999998889
Q ss_pred CCcHHHHHHHHhhhcCCC-cCcHHHHHHHHHHHHHHcCCCccc-CCcccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEe
Q 000997 916 GLTVLESLLFSAWLRLPS-EIELETQRAFVEEVMELVELTSLS-GALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMD 993 (1194)
Q Consensus 916 ~lTv~e~l~f~~~lr~~~-~~~~~~~~~~v~~~l~~l~l~~~~-~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illLD 993 (1194)
.+||.||+.+........ ........+.++++++.+++.+.. +.. +..|||||||||+||++|+.+|+|||||
T Consensus 92 ~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~~LSgG~~qrv~iA~al~~~p~lllLD 166 (500)
T TIGR02633 92 ELSVAENIFLGNEITLPGGRMAYNAMYLRAKNLLRELQLDADNVTRP-----VGDYGGGQQQLVEIAKALNKQARLLILD 166 (500)
T ss_pred CCcHHHHHHhhccccccccccCHHHHHHHHHHHHHHcCCCCCcccCc-----hhhCCHHHHHHHHHHHHHhhCCCEEEEe
Confidence 999999998864332111 112233445678899999987653 232 3579999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCeEEEEccCcEEEEeCCCCC
Q 000997 994 EPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLGS 1056 (1194)
Q Consensus 994 EPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~~~ 1056 (1194)
|||+|||+.+...+.+.|++++++|.|||++||+++ .+.+.||++++|++ |++++.|+...
T Consensus 167 EPt~~LD~~~~~~l~~~l~~l~~~g~tviiitHd~~-~~~~~~d~i~~l~~-G~i~~~~~~~~ 227 (500)
T TIGR02633 167 EPSSSLTEKETEILLDIIRDLKAHGVACVYISHKLN-EVKAVCDTICVIRD-GQHVATKDMST 227 (500)
T ss_pred CCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCcHH-HHHHhCCEEEEEeC-CeEeeecCccc
Confidence 999999999999999999999888999999999976 46678999999985 78998887654
No 391
>PRK15056 manganese/iron transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.4e-34 Score=321.27 Aligned_cols=204 Identities=24% Similarity=0.409 Sum_probs=164.4
Q ss_pred eEEeeeeeEEEeCCcEEEEEccCCCChHHHHhhhcCCCCCCeeEEEEEEcCccCChhcccceeeEeecCCCCC--CCCcH
Q 000997 842 LQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQETFARISGYCEQNDIHS--PGLTV 919 (1194)
Q Consensus 842 ~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~~~~~~~gyv~Q~~~~~--~~lTv 919 (1194)
+.+|+|+|+++++||++||+||||||||||+++|+|..+ +.+|+|.++|.++.....++.++|++|++.+. ...++
T Consensus 20 ~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~i~~~~~~~~i~~v~q~~~~~~~~~~~~ 97 (272)
T PRK15056 20 HTALRDASFTVPGGSIAALVGVNGSGKSTLFKALMGFVR--LASGKISILGQPTRQALQKNLVAYVPQSEEVDWSFPVLV 97 (272)
T ss_pred cEEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEEhHHhhccceEEEeccccccccCCCcch
Confidence 569999999999999999999999999999999999876 46899999998764332334689999997652 23478
Q ss_pred HHHHHHHhhhcC-CCcCcHHHHHHHHHHHHHHcCCCcccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCC
Q 000997 920 LESLLFSAWLRL-PSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSG 998 (1194)
Q Consensus 920 ~e~l~f~~~lr~-~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEPTsg 998 (1194)
+|++.++..... ..........+.++++++.+++.+..+..+ ..||||||||++||+||+.+|+||+|||||+|
T Consensus 98 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~-----~~LSgG~~qrv~laraL~~~p~llllDEPt~~ 172 (272)
T PRK15056 98 EDVVMMGRYGHMGWLRRAKKRDRQIVTAALARVDMVEFRHRQI-----GELSGGQKKRVFLARAIAQQGQVILLDEPFTG 172 (272)
T ss_pred hhheecccccccccccCCCHHHHHHHHHHHHHcCChhHhcCCc-----ccCCHHHHHHHHHHHHHhcCCCEEEEeCCCcc
Confidence 888865321000 000111223345678899999987766643 57999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCeEEEEccCcEEEEeCCCC
Q 000997 999 LDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLG 1055 (1194)
Q Consensus 999 LD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~~ 1055 (1194)
||+.++..+.+.|++++++|+|||+++|+++ .+.+.+|+++++ + |++++.|+..
T Consensus 173 LD~~~~~~l~~~L~~~~~~g~tviivsH~~~-~~~~~~d~v~~~-~-G~i~~~g~~~ 226 (272)
T PRK15056 173 VDVKTEARIISLLRELRDEGKTMLVSTHNLG-SVTEFCDYTVMV-K-GTVLASGPTE 226 (272)
T ss_pred CCHHHHHHHHHHHHHHHhCCCEEEEEeCCHH-HHHHhCCEEEEE-C-CEEEeecCHH
Confidence 9999999999999999877999999999986 567889999776 4 7899988764
No 392
>PRK10982 galactose/methyl galaxtoside transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3e-34 Score=349.75 Aligned_cols=208 Identities=25% Similarity=0.333 Sum_probs=173.9
Q ss_pred cceEEeeeeeEEEeCCcEEEEEccCCCChHHHHhhhcCCCCCCeeEEEEEEcCccCCh----hcccceeeEeecCCCCCC
Q 000997 840 DRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ----ETFARISGYCEQNDIHSP 915 (1194)
Q Consensus 840 ~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~----~~~~~~~gyv~Q~~~~~~ 915 (1194)
+++.+|+||||++++||++||+||||||||||+++|+|..+ +.+|+|.++|.++.. ...++.+||++|++.+++
T Consensus 9 ~~~~il~~vs~~i~~Ge~~~liG~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~ 86 (491)
T PRK10982 9 PGVKALDNVNLKVRPHSIHALMGENGAGKSTLLKCLFGIYQ--KDSGSILFQGKEIDFKSSKEALENGISMVHQELNLVL 86 (491)
T ss_pred CCEEeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCC--CCceEEEECCEECCCCCHHHHHhCCEEEEeccccccc
Confidence 34679999999999999999999999999999999999876 468999999987642 223567999999998889
Q ss_pred CCcHHHHHHHHhhhcCCCcCcHHHHHHHHHHHHHHcCCCcccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCC
Q 000997 916 GLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEP 995 (1194)
Q Consensus 916 ~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEP 995 (1194)
.+||+||+.+.............+..+.++++++.+++.+..+..+ ..|||||||||+||++|+.+|++||||||
T Consensus 87 ~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSgGq~qrv~lA~al~~~p~lllLDEP 161 (491)
T PRK10982 87 QRSVMDNMWLGRYPTKGMFVDQDKMYRDTKAIFDELDIDIDPRAKV-----ATLSVSQMQMIEIAKAFSYNAKIVIMDEP 161 (491)
T ss_pred CCCHHHHhhcccccccccccCHHHHHHHHHHHHHHcCCCCCccCch-----hhCCHHHHHHHHHHHHHHhCCCEEEEeCC
Confidence 9999999987532110100122333456888999999987666543 58999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCeEEEEccCcEEEEeCCCCC
Q 000997 996 TSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLGS 1056 (1194)
Q Consensus 996 TsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~~~ 1056 (1194)
|+|||+.+...+++.|+++++.|.|||+++|+++ ++...||++++|. +|+++..|+...
T Consensus 162 t~~LD~~~~~~l~~~l~~l~~~g~tvii~tH~~~-~~~~~~d~i~~l~-~G~i~~~~~~~~ 220 (491)
T PRK10982 162 TSSLTEKEVNHLFTIIRKLKERGCGIVYISHKME-EIFQLCDEITILR-DGQWIATQPLAG 220 (491)
T ss_pred CCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCHH-HHHHhCCEEEEEE-CCEEEeecChhh
Confidence 9999999999999999999888999999999976 4667899999998 479999988654
No 393
>PRK14247 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.7e-34 Score=317.00 Aligned_cols=209 Identities=25% Similarity=0.314 Sum_probs=169.9
Q ss_pred eeeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCC--CceeeEEEECCccCCCCC---CCceEEEEecCCCCCC
Q 000997 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHH--LQVSGKITYNGHGFKEFV---PPRTSAYVSQQDWQVA 222 (1194)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~--~~~~G~i~~~G~~~~~~~---~~~~~~yv~Q~d~~~~ 222 (1194)
.++|+|+|++|++|++++|+||||||||||+++|+|.+++. .+.+|+|.++|.++.... .++.++|++|++.+++
T Consensus 16 ~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~i~~v~q~~~~~~ 95 (250)
T PRK14247 16 VEVLDGVNLEIPDNTITALMGPSGSGKSTLLRVFNRLIELYPEARVSGEVYLDGQDIFKMDVIELRRRVQMVFQIPNPIP 95 (250)
T ss_pred eeeeecceeEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCCCCceEEEECCEECCcCCHHHHhccEEEEeccCccCC
Confidence 35999999999999999999999999999999999998642 135999999998875432 2467999999998889
Q ss_pred CCCHHHHHHHhhhccCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhccCcchhHHHHHHHHHhCCcc----ccccc
Q 000997 223 EMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDT----CADTL 298 (1194)
Q Consensus 223 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~k~~~~~~~~~~~~~~~~l~~lgL~~----~~dt~ 298 (1194)
.+||.||+.++.+....... . .+....++++++.+||.+ ..|+.
T Consensus 96 ~~tv~enl~~~~~~~~~~~~------------------~--------------~~~~~~~~~~l~~~~l~~~~~~~~~~~ 143 (250)
T PRK14247 96 NLSIFENVALGLKLNRLVKS------------------K--------------KELQERVRWALEKAQLWDEVKDRLDAP 143 (250)
T ss_pred CCcHHHHHHHHHHhccccCC------------------H--------------HHHHHHHHHHHHHcCCCcchhhhhcCC
Confidence 99999999886432210000 0 001223677888999864 23443
Q ss_pred ccCccCCCCChhhhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeE
Q 000997 299 VGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDV 378 (1194)
Q Consensus 299 vg~~~~~~LSGGqkqRvsia~al~~~~~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~v 378 (1194)
+..|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++.+ + ++++.++|..+++.+++|+|
T Consensus 144 -----~~~LSgG~~qrv~laral~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~--~-~tiii~sH~~~~~~~~~d~i 215 (250)
T PRK14247 144 -----AGKLSGGQQQRLCIARALAFQPEVLLADEPTANLDPENTAKIESLFLELKK--D-MTIVLVTHFPQQAARISDYV 215 (250)
T ss_pred -----cccCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhc--C-CEEEEEeCCHHHHHHhcCEE
Confidence 457999999999999999999999999999999999999999999998853 3 56666888888999999999
Q ss_pred EEEcCCeEEEecChhhHH
Q 000997 379 ILLSEGQIVYQGPRVSVL 396 (1194)
Q Consensus 379 ilL~~G~iv~~G~~~~~~ 396 (1194)
++|++|++++.|+.+++.
T Consensus 216 ~~l~~G~i~~~g~~~~~~ 233 (250)
T PRK14247 216 AFLYKGQIVEWGPTREVF 233 (250)
T ss_pred EEEECCeEEEECCHHHHH
Confidence 999999999999987763
No 394
>PRK15093 antimicrobial peptide ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.8e-34 Score=326.85 Aligned_cols=217 Identities=16% Similarity=0.198 Sum_probs=171.8
Q ss_pred eeeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCC-CceeeEEEECCccCCCCCC-------CceEEEEecCCC
Q 000997 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHH-LQVSGKITYNGHGFKEFVP-------PRTSAYVSQQDW 219 (1194)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~-~~~~G~i~~~G~~~~~~~~-------~~~~~yv~Q~d~ 219 (1194)
..+|+|||++|++||+++|+|+||||||||+++|+|++++. ...+|+|.|+|.++..... ++.++||+|++.
T Consensus 20 ~~~l~~vsl~i~~Ge~~~ivG~sGsGKSTLl~~i~Gl~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~~~i~~v~Q~~~ 99 (330)
T PRK15093 20 VKAVDRVSMTLTEGEIRGLVGESGSGKSLIAKAICGVTKDNWRVTADRMRFDDIDLLRLSPRERRKLVGHNVSMIFQEPQ 99 (330)
T ss_pred EEEEeeeEEEECCCCEEEEECCCCCCHHHHHHHHHccCCCCCCCcceEEEECCEECCcCCHHHHHHHhCCCEEEEecCcc
Confidence 56999999999999999999999999999999999998642 2358999999998765432 246999999975
Q ss_pred --CCCCCCHHHHHHHhhhccCC-CCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhccCcchhHHHHHHHHHhCCccccc
Q 000997 220 --QVAEMTVRETLDFAGQCQGV-GSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCAD 296 (1194)
Q Consensus 220 --~~~~lTV~E~l~f~~~~~~~-~~~~~~~~~~~~~e~~~~~~~~~d~~~~~k~~~~~~~~~~~~~~~~l~~lgL~~~~d 296 (1194)
+.+.+||.+++.+....... +..+ .+. .+....+.++|+.+||.+..+
T Consensus 100 ~~l~p~~tv~~~l~~~~~~~~~~~~~~----------------~~~-------------~~~~~~~~~~L~~~gL~~~~~ 150 (330)
T PRK15093 100 SCLDPSERVGRQLMQNIPGWTYKGRWW----------------QRF-------------GWRKRRAIELLHRVGIKDHKD 150 (330)
T ss_pred hhcCccccHHHHHHHHHHhhhcccccc----------------ccH-------------HHHHHHHHHHHHHCCCCChHH
Confidence 57889999999763221100 0000 000 001234778999999975321
Q ss_pred ccccCccCCCCChhhhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcC
Q 000997 297 TLVGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFD 376 (1194)
Q Consensus 297 t~vg~~~~~~LSGGqkqRvsia~al~~~~~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D 376 (1194)
+-+.....|||||||||+||+||+.+|++|++||||+|||+.++.++.+.|+++.+.. +.+|+.++|+...+.+++|
T Consensus 151 --~~~~~p~~LSgG~~QRv~iArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~-g~tii~itHdl~~v~~~~d 227 (330)
T PRK15093 151 --AMRSFPYELTEGECQKVMIAIALANQPRLLIADEPTNAMEPTTQAQIFRLLTRLNQNN-NTTILLISHDLQMLSQWAD 227 (330)
T ss_pred --HHhCCchhCCHHHHHHHHHHHHHHCCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhc-CCEEEEEECCHHHHHHhCC
Confidence 1123445799999999999999999999999999999999999999999999987643 4567778999999999999
Q ss_pred eEEEEcCCeEEEecChhhHH
Q 000997 377 DVILLSEGQIVYQGPRVSVL 396 (1194)
Q Consensus 377 ~vilL~~G~iv~~G~~~~~~ 396 (1194)
+|++|++|+|++.|+.+++.
T Consensus 228 ri~vm~~G~ive~g~~~~i~ 247 (330)
T PRK15093 228 KINVLYCGQTVETAPSKELV 247 (330)
T ss_pred EEEEEECCEEEEECCHHHHH
Confidence 99999999999999988764
No 395
>PRK15439 autoinducer 2 ABC transporter ATP-binding protein LsrA; Provisional
Probab=100.00 E-value=2.6e-34 Score=351.16 Aligned_cols=211 Identities=22% Similarity=0.317 Sum_probs=177.5
Q ss_pred eEeecceeeeecccccccccccccceEEeeeeeEEEeCCcEEEEEccCCCChHHHHhhhcCCCCCCeeEEEEEEcCccCC
Q 000997 817 MAFGNINYFVDVPVELKQEGVLEDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKR 896 (1194)
Q Consensus 817 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 896 (1194)
+.++|+++.+ +++.+|+|+||++++|+++||+|||||||||||++|+|... +.+|+|.++|.++.
T Consensus 12 l~~~~l~~~~-------------~~~~il~~vsl~i~~Ge~~~liG~NGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~~~ 76 (510)
T PRK15439 12 LCARSISKQY-------------SGVEVLKGIDFTLHAGEVHALLGGNGAGKSTLMKIIAGIVP--PDSGTLEIGGNPCA 76 (510)
T ss_pred EEEEeEEEEe-------------CCceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEECC
Confidence 5566666544 34579999999999999999999999999999999999876 46899999998754
Q ss_pred h---hc-ccceeeEeecCCCCCCCCcHHHHHHHHhhhcCCCcCcHHHHHHHHHHHHHHcCCCcccCCcccCCCCCCCCHH
Q 000997 897 Q---ET-FARISGYCEQNDIHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTE 972 (1194)
Q Consensus 897 ~---~~-~~~~~gyv~Q~~~~~~~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgG 972 (1194)
. .. .++.+||++|++.+++.+||+||+.|.... ....++.++++++.+++.+..+..+ ..||||
T Consensus 77 ~~~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~-------~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSgG 144 (510)
T PRK15439 77 RLTPAKAHQLGIYLVPQEPLLFPNLSVKENILFGLPK-------RQASMQKMKQLLAALGCQLDLDSSA-----GSLEVA 144 (510)
T ss_pred CCCHHHHHhCCEEEEeccCccCCCCcHHHHhhccccc-------chHHHHHHHHHHHHcCCCccccCCh-----hhCCHH
Confidence 2 11 234689999999999999999999875311 1223456788999999987766543 579999
Q ss_pred HHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCeEEEEccCcEEEEeC
Q 000997 973 QRKRLTIAVELVANPSIVFMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAG 1052 (1194)
Q Consensus 973 qrqrl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g 1052 (1194)
|||||+||++|+.+|+||||||||+|||+.++..+.+.|++++++|.|||+++|+++ .+...||++++|.+ |++++.|
T Consensus 145 ~~qrv~la~aL~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tiiivtHd~~-~~~~~~d~i~~l~~-G~i~~~g 222 (510)
T PRK15439 145 DRQIVEILRGLMRDSRILILDEPTASLTPAETERLFSRIRELLAQGVGIVFISHKLP-EIRQLADRISVMRD-GTIALSG 222 (510)
T ss_pred HHHHHHHHHHHHcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEec
Confidence 999999999999999999999999999999999999999999888999999999976 46678999999985 7899998
Q ss_pred CCCC
Q 000997 1053 PLGS 1056 (1194)
Q Consensus 1053 ~~~~ 1056 (1194)
+..+
T Consensus 223 ~~~~ 226 (510)
T PRK15439 223 KTAD 226 (510)
T ss_pred ChHH
Confidence 8653
No 396
>PRK13633 cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.4e-34 Score=323.45 Aligned_cols=205 Identities=23% Similarity=0.327 Sum_probs=169.9
Q ss_pred eeeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCceeeEEEECCccCCCCC----CCceEEEEecCCC-CCC
Q 000997 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV----PPRTSAYVSQQDW-QVA 222 (1194)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~~----~~~~~~yv~Q~d~-~~~ 222 (1194)
+++|+|+|++|++|++++|+||||||||||+++|+|.++++ +|+|.++|.++.... .++.++|++|++. .+.
T Consensus 23 ~~vl~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~---~G~i~i~g~~i~~~~~~~~~~~~i~~v~q~~~~~~~ 99 (280)
T PRK13633 23 KLALDDVNLEVKKGEFLVILGRNGSGKSTIAKHMNALLIPS---EGKVYVDGLDTSDEENLWDIRNKAGMVFQNPDNQIV 99 (280)
T ss_pred cceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEeccccccHHHHhhheEEEecChhhhhc
Confidence 46999999999999999999999999999999999999876 999999998875421 2467999999974 234
Q ss_pred CCCHHHHHHHhhhccCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhccCcchhHHHHHHHHHhCCcccccccccCc
Q 000997 223 EMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDE 302 (1194)
Q Consensus 223 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~k~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~ 302 (1194)
..||.||+.|+....+... .+....++++++.+||+...++.++
T Consensus 100 ~~~v~~~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~gL~~~~~~~~~-- 143 (280)
T PRK13633 100 ATIVEEDVAFGPENLGIPP----------------------------------EEIRERVDESLKKVGMYEYRRHAPH-- 143 (280)
T ss_pred cccHHHHHHhhHhhcCCCH----------------------------------HHHHHHHHHHHHHCCCHhHhhCCcc--
Confidence 5699999988643221100 0012247789999999887777664
Q ss_pred cCCCCChhhhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEc
Q 000997 303 MLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLS 382 (1194)
Q Consensus 303 ~~~~LSGGqkqRvsia~al~~~~~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~ 382 (1194)
.|||||||||+||++|+.+|++++|||||+|||+.++..+.+.|+++++.. +++|+.++|..+++.. +|++++|+
T Consensus 144 ---~LS~G~~qrv~laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~~~-g~tillvtH~~~~~~~-~d~v~~l~ 218 (280)
T PRK13633 144 ---LLSGGQKQRVAIAGILAMRPECIIFDEPTAMLDPSGRREVVNTIKELNKKY-GITIILITHYMEEAVE-ADRIIVMD 218 (280)
T ss_pred ---cCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhc-CCEEEEEecChHHHhc-CCEEEEEE
Confidence 699999999999999999999999999999999999999999999987543 4555667788888765 99999999
Q ss_pred CCeEEEecChhhHH
Q 000997 383 EGQIVYQGPRVSVL 396 (1194)
Q Consensus 383 ~G~iv~~G~~~~~~ 396 (1194)
+|++++.|+.+++.
T Consensus 219 ~G~i~~~g~~~~~~ 232 (280)
T PRK13633 219 SGKVVMEGTPKEIF 232 (280)
T ss_pred CCEEEEecCHHHHh
Confidence 99999999988875
No 397
>cd03298 ABC_ThiQ_thiamine_transporter ABC-type thiamine tranport system; part of the binding-protein-dependent transport system tbpA-thiPQ for thiamine and TPP. Probably responsible for the translocation of thiamine across the membrane. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.4e-34 Score=310.55 Aligned_cols=195 Identities=24% Similarity=0.333 Sum_probs=163.6
Q ss_pred cceEeEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCceeeEEEECCccCCCCC-CCceEEEEecCCCCCCCCCHHHHHH
Q 000997 153 DLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV-PPRTSAYVSQQDWQVAEMTVRETLD 231 (1194)
Q Consensus 153 ~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~~-~~~~~~yv~Q~d~~~~~lTV~E~l~ 231 (1194)
|+|+++++|++++|+|||||||||||++|+|.+++. +|+|.++|.++.... .++.++|++|++.+++.+||+||+.
T Consensus 16 ~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~gl~~~~---~G~i~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~tv~enl~ 92 (211)
T cd03298 16 HFDLTFAQGEITAIVGPSGSGKSTLLNLIAGFETPQ---SGRVLINGVDVTAAPPADRPVSMLFQENNLFAHLTVEQNVG 92 (211)
T ss_pred ceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEEcCcCCHhHccEEEEecccccCCCCcHHHHHh
Confidence 999999999999999999999999999999999876 999999998875432 2357999999999899999999998
Q ss_pred HhhhccCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhccCcchhHHHHHHHHHhCCcccccccccCccCCCCChhh
Q 000997 232 FAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEMLKGISGGQ 311 (1194)
Q Consensus 232 f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~k~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~LSGGq 311 (1194)
++..... .. . ...+..++++++.+||.+..++.+ ..|||||
T Consensus 93 ~~~~~~~-~~--~-------------------------------~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~ 133 (211)
T cd03298 93 LGLSPGL-KL--T-------------------------------AEDRQAIEVALARVGLAGLEKRLP-----GELSGGE 133 (211)
T ss_pred ccccccc-Cc--c-------------------------------HHHHHHHHHHHHHcCCHHHHhCCc-----ccCCHHH
Confidence 7532110 00 0 001224678899999987777655 4699999
Q ss_pred hhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEcCCeEEEec
Q 000997 312 KKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEGQIVYQG 390 (1194)
Q Consensus 312 kqRvsia~al~~~~~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~~G~iv~~G 390 (1194)
||||+||+|++.+|++++|||||+|||..++..+.+.|+++++.. +.+|+.++|+..++.+++|++++|++|++++.|
T Consensus 134 ~qrv~ia~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~-~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~~ 211 (211)
T cd03298 134 RQRVALARVLVRDKPVLLLDEPFAALDPALRAEMLDLVLDLHAET-KMTVLMVTHQPEDAKRLAQRVVFLDNGRIAAQG 211 (211)
T ss_pred HHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhc-CCEEEEEecCHHHHHhhhCEEEEEECCEEeecC
Confidence 999999999999999999999999999999999999999986533 455666889999999999999999999998764
No 398
>PRK10790 putative multidrug transporter membrane\ATP-binding components; Provisional
Probab=100.00 E-value=4.5e-34 Score=356.55 Aligned_cols=206 Identities=22% Similarity=0.309 Sum_probs=165.8
Q ss_pred eeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCceeeEEEECCccCCCCCC---CceEEEEecCCCCCCCCC
Q 000997 149 TILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVP---PRTSAYVSQQDWQVAEMT 225 (1194)
Q Consensus 149 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~lT 225 (1194)
++|+|+|++++|||.++|+|+||||||||+++|+|+++|. +|+|.+||.++++... ++.++||+|++.+|+. |
T Consensus 355 ~il~~i~l~i~~Ge~iaIvG~SGsGKSTLl~lL~gl~~p~---~G~I~idg~~i~~~~~~~l~~~i~~v~Q~~~lF~~-T 430 (592)
T PRK10790 355 LVLQNINLSVPSRGFVALVGHTGSGKSTLASLLMGYYPLT---EGEIRLDGRPLSSLSHSVLRQGVAMVQQDPVVLAD-T 430 (592)
T ss_pred ceeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCC---CceEEECCEEhhhCCHHHHHhheEEEccCCccccc-h
Confidence 5999999999999999999999999999999999999887 9999999999876643 5789999999998875 9
Q ss_pred HHHHHHHhhhccCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhccCcchhHHHHHHHHHhCCcccccccccCccCC
Q 000997 226 VRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEMLK 305 (1194)
Q Consensus 226 V~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~k~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~ 305 (1194)
++|||.++.. ...+.+.+++ +... .++.++ .|++..||.+|+. ..
T Consensus 431 i~~NI~~~~~-----~~d~~i~~a~------------------~~~g---------l~~~i~--~lp~Gldt~i~e~-g~ 475 (592)
T PRK10790 431 FLANVTLGRD-----ISEEQVWQAL------------------ETVQ---------LAELAR--SLPDGLYTPLGEQ-GN 475 (592)
T ss_pred HHHHHHhCCC-----CCHHHHHHHH------------------HHcC---------cHHHHH--hccccccccccCC-CC
Confidence 9999988521 0111111111 1000 111121 2667889999975 45
Q ss_pred CCChhhhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEcCCe
Q 000997 306 GISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEGQ 385 (1194)
Q Consensus 306 ~LSGGqkqRvsia~al~~~~~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~~G~ 385 (1194)
+||||||||++|||||+.+|+|++||||||+||+.++..|.+.|+++.. ++|+|+ ++|.. +....+|+|++|++|+
T Consensus 476 ~LSGGqrQRialARaLl~~~~illlDEpts~LD~~t~~~i~~~l~~~~~--~~tvIi-vtHr~-~~l~~~D~ii~l~~G~ 551 (592)
T PRK10790 476 NLSVGQKQLLALARVLVQTPQILILDEATANIDSGTEQAIQQALAAVRE--HTTLVV-IAHRL-STIVEADTILVLHRGQ 551 (592)
T ss_pred CCCHHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhC--CCEEEE-Eecch-HHHHhCCEEEEEECCE
Confidence 7999999999999999999999999999999999999999999998753 456555 44544 4566799999999999
Q ss_pred EEEecChhhHHH
Q 000997 386 IVYQGPRVSVLD 397 (1194)
Q Consensus 386 iv~~G~~~~~~~ 397 (1194)
++..|+++++.+
T Consensus 552 i~~~G~~~~L~~ 563 (592)
T PRK10790 552 AVEQGTHQQLLA 563 (592)
T ss_pred EEEEcCHHHHHh
Confidence 999999999863
No 399
>PRK14255 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.2e-34 Score=317.10 Aligned_cols=207 Identities=22% Similarity=0.293 Sum_probs=163.6
Q ss_pred ceEEeeeeeEEEeCCcEEEEEccCCCChHHHHhhhcCCCC--C-CeeEEEEEEcCccCCh-----hcccceeeEeecCCC
Q 000997 841 RLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKT--G-GIIEGDIYISGYPKRQ-----ETFARISGYCEQNDI 912 (1194)
Q Consensus 841 ~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~--~-~~~~G~i~i~g~~~~~-----~~~~~~~gyv~Q~~~ 912 (1194)
.+.+|+|+|+++.+||++||+|+||||||||+++|+|... + .+.+|+|.++|.++.. ...++.+||++|++.
T Consensus 17 ~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~~ 96 (252)
T PRK14255 17 KFEALKGIDLDFNQNEITALIGPSGCGKSTYLRTLNRMNDLIPGVTITGNVSLRGQNIYAPNEDVVQLRKQVGMVFQQPN 96 (252)
T ss_pred CeeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCcccEEEEcCEEcccccccHHHhcCeEEEEECCCc
Confidence 3579999999999999999999999999999999999743 1 1247999999987631 234567999999988
Q ss_pred CCCCCcHHHHHHHHhhhcCCCcCcHHHHHHHHHHHHHHcCCCcccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEE
Q 000997 913 HSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFM 992 (1194)
Q Consensus 913 ~~~~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illL 992 (1194)
+++ .|++||+.+....+... ......+.+.+.++.+++......... ..+..||+|||||++||++|+.+|++|+|
T Consensus 97 ~~~-~tv~~nl~~~~~~~~~~--~~~~~~~~~~~~l~~~~l~~~i~~~~~-~~~~~LS~Gq~qrv~laral~~~p~llll 172 (252)
T PRK14255 97 PFP-FSIYENVIYGLRLAGVK--DKAVLDEAVETSLKQAAIWDEVKDHLH-ESALSLSGGQQQRVCIARVLAVKPDVILL 172 (252)
T ss_pred cCC-CcHHHHHHHHHHHcCCC--CHHHHHHHHHHHHHHcCCccchhhHHh-cCcccCCHHHHHHHHHHHHHhcCCCEEEE
Confidence 887 69999998865433211 112223445677777776421111111 12468999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCeEEEEccCcEEEEeCCC
Q 000997 993 DEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1194)
Q Consensus 993 DEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~ 1054 (1194)
||||+|||+.++..+.+.|+++.+ +.|||++||+++ .+.+.+|++++|+ +|+++..|+.
T Consensus 173 DEPt~~LD~~~~~~l~~~l~~~~~-~~tii~vsH~~~-~~~~~~d~i~~l~-~G~i~~~~~~ 231 (252)
T PRK14255 173 DEPTSALDPISSTQIENMLLELRD-QYTIILVTHSMH-QASRISDKTAFFL-TGNLIEFADT 231 (252)
T ss_pred cCCCccCCHHHHHHHHHHHHHHHh-CCEEEEEECCHH-HHHHhCCEEEEEE-CCEEEEeCCH
Confidence 999999999999999999999865 589999999986 4667899999998 5789888874
No 400
>TIGR01166 cbiO cobalt transport protein ATP-binding subunit. This model describes the ATP binding subunit of the multisubunit cobalt transporter in bacteria and its equivalents in archaea. The model is restricted to ATP subunit that is a part of the cobalt transporter, which belongs to the ABC transporter superfamily (ATP Binding Cassette). The model excludes ATP binding subunit that are associated with other transporters belonging to ABC transporter superfamily. This superfamily includes two groups, one which catalyze the uptake of small molecules, including ions from the external milieu and the other group which is engaged in the efflux of small molecular weight compounds and ions from within the cell. Energy derived from the hydrolysis of ATP drive the both the process of uptake and efflux.
Probab=100.00 E-value=2.5e-34 Score=306.28 Aligned_cols=179 Identities=25% Similarity=0.316 Sum_probs=150.3
Q ss_pred ceEEeeeeeEEEeCCcEEEEEccCCCChHHHHhhhcCCCCCCeeEEEEEEcCccCCh-----hcccceeeEeecCCC-CC
Q 000997 841 RLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ-----ETFARISGYCEQNDI-HS 914 (1194)
Q Consensus 841 ~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~-----~~~~~~~gyv~Q~~~-~~ 914 (1194)
++.+|+|||+++++||++||+||||||||||+++|+|..+ +.+|+|.++|.++.. ..+++.++|++|++. ..
T Consensus 4 ~~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~--~~~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~~~ 81 (190)
T TIGR01166 4 GPEVLKGLNFAAERGEVLALLGANGAGKSTLLLHLNGLLR--PQSGAVLIDGEPLDYSRKGLLERRQRVGLVFQDPDDQL 81 (190)
T ss_pred ccceecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceeEEECCEEccccccchHHHHhhEEEEecChhhcc
Confidence 3569999999999999999999999999999999999876 468999999987531 134567999999973 23
Q ss_pred CCCcHHHHHHHHhhhcCCCcCcHHHHHHHHHHHHHHcCCCcccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeC
Q 000997 915 PGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDE 994 (1194)
Q Consensus 915 ~~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illLDE 994 (1194)
...|++||+.+..... .....+..+.++++++.+++.+..+..+ ..||||||||++|||||+.+|++|+|||
T Consensus 82 ~~~tv~~nl~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrv~laral~~~p~llllDE 153 (190)
T TIGR01166 82 FAADVDQDVAFGPLNL---GLSEAEVERRVREALTAVGASGLRERPT-----HCLSGGEKKRVAIAGAVAMRPDVLLLDE 153 (190)
T ss_pred ccccHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCchhhhhCCh-----hhCCHHHHHHHHHHHHHhcCCCEEEEcC
Confidence 3579999998865322 1223334456788999999987766643 5799999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCc
Q 000997 995 PTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPS 1029 (1194)
Q Consensus 995 PTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~ 1029 (1194)
||+|||+.++..+.+.|++++++|+|||+++|+++
T Consensus 154 Pt~~LD~~~~~~~~~~l~~~~~~~~tili~sH~~~ 188 (190)
T TIGR01166 154 PTAGLDPAGREQMLAILRRLRAEGMTVVISTHDVD 188 (190)
T ss_pred CcccCCHHHHHHHHHHHHHHHHcCCEEEEEeeccc
Confidence 99999999999999999999877999999999975
No 401
>CHL00131 ycf16 sulfate ABC transporter protein; Validated
Probab=100.00 E-value=6.3e-34 Score=317.16 Aligned_cols=209 Identities=24% Similarity=0.333 Sum_probs=165.8
Q ss_pred ceEEeeeeeEEEeCCcEEEEEccCCCChHHHHhhhcCCCCCCeeEEEEEEcCccCCh---hcccc-eeeEeecCCCCCCC
Q 000997 841 RLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ---ETFAR-ISGYCEQNDIHSPG 916 (1194)
Q Consensus 841 ~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~---~~~~~-~~gyv~Q~~~~~~~ 916 (1194)
++.+|+|||+++++||++||+|+||||||||+++|+|.....+.+|+|.++|.++.. ....+ .++|++|++.+++.
T Consensus 19 ~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~G~i~~~g~~~~~~~~~~~~~~~~~~~~q~~~~~~~ 98 (252)
T CHL00131 19 ENEILKGLNLSINKGEIHAIMGPNGSGKSTLSKVIAGHPAYKILEGDILFKGESILDLEPEERAHLGIFLAFQYPIEIPG 98 (252)
T ss_pred CEEeeecceeEEcCCcEEEEECCCCCCHHHHHHHHcCCCcCcCCCceEEECCEEcccCChhhhheeeEEEEecccccccc
Confidence 356999999999999999999999999999999999972112468999999987643 12223 47899999999999
Q ss_pred CcHHHHHHHHhhhcCC----CcCcHHHHHHHHHHHHHHcCCC-cccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCEEE
Q 000997 917 LTVLESLLFSAWLRLP----SEIELETQRAFVEEVMELVELT-SLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVF 991 (1194)
Q Consensus 917 lTv~e~l~f~~~lr~~----~~~~~~~~~~~v~~~l~~l~l~-~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~ill 991 (1194)
+|+.+++.+....... ......+..+.+.++++.+++. ...+.... ..|||||||||+||++|+.+|+||+
T Consensus 99 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~----~~LSgG~~qrv~la~al~~~p~lll 174 (252)
T CHL00131 99 VSNADFLRLAYNSKRKFQGLPELDPLEFLEIINEKLKLVGMDPSFLSRNVN----EGFSGGEKKRNEILQMALLDSELAI 174 (252)
T ss_pred ccHHHHHHHhhhhhhcccccccccHHHHHHHHHHHHHHcCCchhhhccccc----cCCCHHHHHHHHHHHHHHcCCCEEE
Confidence 9999999875432110 0111222335677888888886 34444321 2599999999999999999999999
Q ss_pred EeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHh-cCeEEEEccCcEEEEeCCCC
Q 000997 992 MDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFES-FDELLFMKRGGELIYAGPLG 1055 (1194)
Q Consensus 992 LDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~-~d~~~~l~~gG~~~~~g~~~ 1055 (1194)
|||||+|||+.++..+.+.|++++++|+|||++||+++. +... +|++++|. +|++++.|+..
T Consensus 175 lDEPt~~LD~~~~~~l~~~l~~~~~~g~tii~~tH~~~~-~~~~~~d~i~~l~-~G~i~~~~~~~ 237 (252)
T CHL00131 175 LDETDSGLDIDALKIIAEGINKLMTSENSIILITHYQRL-LDYIKPDYVHVMQ-NGKIIKTGDAE 237 (252)
T ss_pred EcCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEecCHHH-HHhhhCCEEEEEe-CCEEEEecChh
Confidence 999999999999999999999998779999999999763 4444 79999997 58999998763
No 402
>TIGR01978 sufC FeS assembly ATPase SufC. SufC is part of the SUF system, shown in E. coli to consist of six proteins and believed to act in Fe-S cluster formation during oxidative stress. SufC forms a complex with SufB and SufD. SufC belongs to the ATP-binding cassette transporter family (pfam00005) but is no longer thought to be part of a transporter. The complex is reported as cytosolic (PubMed:12554644) or associated with the membrane (PubMed:11943156). The SUF system also includes a cysteine desulfurase (SufS, enhanced by SufE) and a probable iron-sulfur cluster assembly scaffold protein, SufA.
Probab=100.00 E-value=5.9e-34 Score=315.74 Aligned_cols=213 Identities=22% Similarity=0.276 Sum_probs=169.0
Q ss_pred eeeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHhcCc--CCCCceeeEEEECCccCCCCCC----CceEEEEecCCCCC
Q 000997 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRL--GHHLQVSGKITYNGHGFKEFVP----PRTSAYVSQQDWQV 221 (1194)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l--~~~~~~~G~i~~~G~~~~~~~~----~~~~~yv~Q~d~~~ 221 (1194)
.++|+|+|+.|++|++++|+|||||||||||++|+|.+ ++. +|+|.++|.++..... +..++|++|++.++
T Consensus 13 ~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~---~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~ 89 (243)
T TIGR01978 13 KEILKGVNLTVKKGEIHAIMGPNGSGKSTLSKTIAGHPSYEVT---SGTILFKGQDLLELEPDERARAGLFLAFQYPEEI 89 (243)
T ss_pred EEEEeccceEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCC---cceEEECCEecCCCCHHHhhccceEeeecccccc
Confidence 46999999999999999999999999999999999985 344 9999999987754322 23489999999999
Q ss_pred CCCCHHHHHHHhhhccCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhccCcchhHHHHHHHHHhCCcc-ccccccc
Q 000997 222 AEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDT-CADTLVG 300 (1194)
Q Consensus 222 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~k~~~~~~~~~~~~~~~~l~~lgL~~-~~dt~vg 300 (1194)
+.+|++|++.+.......... .... ...+....++.+++.+||+. ..++.++
T Consensus 90 ~~~t~~~~~~~~~~~~~~~~~------------------~~~~---------~~~~~~~~~~~~l~~~~l~~~~~~~~~~ 142 (243)
T TIGR01978 90 PGVSNLEFLRSALNARRSARG------------------EEPL---------DLLDFLKLLKAKLALLGMDEEFLNRSVN 142 (243)
T ss_pred CCcCHHHHHHHHHHHhhcccc------------------cccc---------cHHHHHHHHHHHHHHcCCchhhcccccc
Confidence 999999999875432110000 0000 00011234778899999973 4555443
Q ss_pred CccCCCCChhhhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhh-cCeEE
Q 000997 301 DEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYEL-FDDVI 379 (1194)
Q Consensus 301 ~~~~~~LSGGqkqRvsia~al~~~~~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~-~D~vi 379 (1194)
..|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++++ . +++|+.++|+.+++... +|+++
T Consensus 143 ----~~LS~G~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~-~~tvi~vsH~~~~~~~~~~d~i~ 216 (243)
T TIGR01978 143 ----EGFSGGEKKRNEILQMALLEPKLAILDEIDSGLDIDALKIVAEGINRLRE-P-DRSFLIITHYQRLLNYIKPDYVH 216 (243)
T ss_pred ----cCcCHHHHHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHH-C-CcEEEEEEecHHHHHhhcCCeEE
Confidence 14999999999999999999999999999999999999999999999864 2 45566688888888888 89999
Q ss_pred EEcCCeEEEecChhhHH
Q 000997 380 LLSEGQIVYQGPRVSVL 396 (1194)
Q Consensus 380 lL~~G~iv~~G~~~~~~ 396 (1194)
+|++|++++.|+.+++.
T Consensus 217 ~l~~G~i~~~g~~~~~~ 233 (243)
T TIGR01978 217 VLLDGRIVKSGDVELAK 233 (243)
T ss_pred EEeCCEEEEecCHHHhc
Confidence 99999999999987553
No 403
>PRK11300 livG leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.8e-34 Score=317.98 Aligned_cols=221 Identities=19% Similarity=0.253 Sum_probs=173.2
Q ss_pred eeeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCceeeEEEECCccCCCCCC----CceEEEEecCCCCCCC
Q 000997 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVP----PRTSAYVSQQDWQVAE 223 (1194)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~~~----~~~~~yv~Q~d~~~~~ 223 (1194)
.++|+|+|+++++|++++|+||||||||||+++|+|.+++. +|+|.++|.++..... +..++|++|++.+++.
T Consensus 18 ~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~ 94 (255)
T PRK11300 18 LLAVNNVNLEVREQEIVSLIGPNGAGKTTVFNCLTGFYKPT---GGTILLRGQHIEGLPGHQIARMGVVRTFQHVRLFRE 94 (255)
T ss_pred EEEEEeeeeEEcCCeEEEEECCCCCCHHHHHHHHhCCcCCC---cceEEECCEECCCCCHHHHHhcCeEEeccCcccCCC
Confidence 46999999999999999999999999999999999998876 9999999988754321 2358999999999999
Q ss_pred CCHHHHHHHhhhccCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhccCcchhHHHHHHHHHhCCcccccccccCcc
Q 000997 224 MTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEM 303 (1194)
Q Consensus 224 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~k~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~ 303 (1194)
+||+||+.++....... +.... .......+ ....+....++.+++.+||.+..++.++
T Consensus 95 ~tv~enl~~~~~~~~~~---~~~~~---------~~~~~~~~-------~~~~~~~~~~~~~l~~~gl~~~~~~~~~--- 152 (255)
T PRK11300 95 MTVIENLLVAQHQQLKT---GLFSG---------LLKTPAFR-------RAESEALDRAATWLERVGLLEHANRQAG--- 152 (255)
T ss_pred CcHHHHHHHhhhccccc---hhhhh---------hccccccc-------cchhHHHHHHHHHHHhCChhhhhhCChh---
Confidence 99999998864311000 00000 00000000 0000112346778899999876666554
Q ss_pred CCCCChhhhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEcC
Q 000997 304 LKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSE 383 (1194)
Q Consensus 304 ~~~LSGGqkqRvsia~al~~~~~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~~ 383 (1194)
.|||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|+++++.. +++|+.++|..+++.+++|++++|++
T Consensus 153 --~LS~G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~~-~~tii~~sH~~~~~~~~~d~i~~l~~ 229 (255)
T PRK11300 153 --NLAYGQQRRLEIARCMVTQPEILMLDEPAAGLNPKETKELDELIAELRNEH-NVTVLLIEHDMKLVMGISDRIYVVNQ 229 (255)
T ss_pred --hCCHHHHHHHHHHHHHhcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHhhc-CCEEEEEeCCHHHHHHhCCEEEEEEC
Confidence 699999999999999999999999999999999999999999999986532 45666688899999999999999999
Q ss_pred CeEEEecChhhHH
Q 000997 384 GQIVYQGPRVSVL 396 (1194)
Q Consensus 384 G~iv~~G~~~~~~ 396 (1194)
|++++.|+.+++.
T Consensus 230 g~i~~~~~~~~~~ 242 (255)
T PRK11300 230 GTPLANGTPEEIR 242 (255)
T ss_pred CeEEecCCHHHHh
Confidence 9999999987653
No 404
>PRK10744 pstB phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=9.6e-34 Score=316.74 Aligned_cols=210 Identities=20% Similarity=0.245 Sum_probs=166.2
Q ss_pred eeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHhcCcC--CCCceeeEEEECCccCCCC-----CCCceEEEEecCCCCC
Q 000997 149 TILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLG--HHLQVSGKITYNGHGFKEF-----VPPRTSAYVSQQDWQV 221 (1194)
Q Consensus 149 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~--~~~~~~G~i~~~G~~~~~~-----~~~~~~~yv~Q~d~~~ 221 (1194)
++|+|+|++|++|++++|+||||||||||+++|+|.+. |..+.+|+|.++|.++... ..++.++|++|++.++
T Consensus 27 ~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~p~~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~~ 106 (260)
T PRK10744 27 HALKNINLDIAKNQVTAFIGPSGCGKSTLLRTFNRMYELYPEQRAEGEILLDGENILTPKQDIALLRAKVGMVFQKPTPF 106 (260)
T ss_pred EEeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCcceEEEECCEEccccccchHHHhcceEEEecCCccC
Confidence 59999999999999999999999999999999999986 2223589999999886421 1246799999998877
Q ss_pred CCCCHHHHHHHhhhccCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhccCcchhHHHHHHHHHhCCcccccccccC
Q 000997 222 AEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGD 301 (1194)
Q Consensus 222 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~k~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 301 (1194)
+ .||+||+.+......... . .+....++++++.+||........ +
T Consensus 107 ~-~tv~~nl~~~~~~~~~~~-~--------------------------------~~~~~~~~~~l~~~~l~~~~~~~~-~ 151 (260)
T PRK10744 107 P-MSIYDNIAFGVRLFEKLS-R--------------------------------AEMDERVEWALTKAALWNEVKDKL-H 151 (260)
T ss_pred c-CcHHHHHhhhHhhcCCCC-H--------------------------------HHHHHHHHHHHHHcCCChhhHHHH-h
Confidence 7 899999987643211000 0 001123677888888743111111 1
Q ss_pred ccCCCCChhhhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEE
Q 000997 302 EMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILL 381 (1194)
Q Consensus 302 ~~~~~LSGGqkqRvsia~al~~~~~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL 381 (1194)
.....|||||||||+||+||+.+|++|+|||||+|||..++..+.+.|+++.. + ++|+.++|+..++.+++|++++|
T Consensus 152 ~~~~~LS~Gq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~--~-~tiii~sH~~~~~~~~~d~i~~l 228 (260)
T PRK10744 152 QSGYSLSGGQQQRLCIARGIAIRPEVLLLDEPCSALDPISTGRIEELITELKQ--D-YTVVIVTHNMQQAARCSDYTAFM 228 (260)
T ss_pred cCCCCCCHHHHHHHHHHHHHHCCCCEEEEcCCCccCCHHHHHHHHHHHHHHhc--C-CeEEEEeCCHHHHHHhCCEEEEE
Confidence 23457999999999999999999999999999999999999999999998853 3 45666888888999999999999
Q ss_pred cCCeEEEecChhhHH
Q 000997 382 SEGQIVYQGPRVSVL 396 (1194)
Q Consensus 382 ~~G~iv~~G~~~~~~ 396 (1194)
++|+++..|+.+++.
T Consensus 229 ~~G~i~~~g~~~~~~ 243 (260)
T PRK10744 229 YLGELIEFGNTDTIF 243 (260)
T ss_pred ECCEEEEeCCHHHHH
Confidence 999999999987764
No 405
>PRK10419 nikE nickel transporter ATP-binding protein NikE; Provisional
Probab=100.00 E-value=4.8e-34 Score=320.09 Aligned_cols=205 Identities=25% Similarity=0.342 Sum_probs=169.7
Q ss_pred ceEEeeeeeEEEeCCcEEEEEccCCCChHHHHhhhcCCCCCCeeEEEEEEcCccCCh------hcccceeeEeecCC--C
Q 000997 841 RLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ------ETFARISGYCEQND--I 912 (1194)
Q Consensus 841 ~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~------~~~~~~~gyv~Q~~--~ 912 (1194)
++.+|+|+||++++||+++|+||||||||||+++|+|... +.+|+|.++|.++.. ...++.++|++|++ .
T Consensus 24 ~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~sG~i~~~g~~~~~~~~~~~~~~~~~i~~v~q~~~~~ 101 (268)
T PRK10419 24 HQTVLNNVSLSLKSGETVALLGRSGCGKSTLARLLVGLES--PSQGNVSWRGEPLAKLNRAQRKAFRRDIQMVFQDSISA 101 (268)
T ss_pred ceeeEeceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEeccccChhHHHHHHhcEEEEEcChhhc
Confidence 3579999999999999999999999999999999999866 468999999987532 12456799999997 3
Q ss_pred CCCCCcHHHHHHHHhhhcCCCcCcHHHHHHHHHHHHHHcCCC-cccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCEEE
Q 000997 913 HSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELT-SLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVF 991 (1194)
Q Consensus 913 ~~~~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~-~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~ill 991 (1194)
+.+..|+.|++.+..... ......+....++++++.+++. ...+.. +..||+|||||++||++|+.+|+||+
T Consensus 102 ~~~~~t~~~~l~~~~~~~--~~~~~~~~~~~~~~~l~~~gl~~~~~~~~-----~~~LS~Ge~qrl~laral~~~p~lll 174 (268)
T PRK10419 102 VNPRKTVREIIREPLRHL--LSLDKAERLARASEMLRAVDLDDSVLDKR-----PPQLSGGQLQRVCLARALAVEPKLLI 174 (268)
T ss_pred cCCCCCHHHHHHHHHHhh--ccCCHHHHHHHHHHHHHHcCCChhHhhCC-----CccCChHHHHHHHHHHHHhcCCCEEE
Confidence 567889999987643211 1122334445688999999986 455543 35799999999999999999999999
Q ss_pred EeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCeEEEEccCcEEEEeCCCCC
Q 000997 992 MDEPTSGLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLGS 1056 (1194)
Q Consensus 992 LDEPTsgLD~~~~~~i~~~l~~l~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~~~ 1056 (1194)
|||||+|||+.+...+.+.|++++++ |.|||+++|+++ .+.+.+|++++|. +|++++.|+..+
T Consensus 175 LDEPt~~LD~~~~~~~~~~l~~~~~~~~~tiiivsH~~~-~i~~~~d~i~~l~-~G~i~~~g~~~~ 238 (268)
T PRK10419 175 LDEAVSNLDLVLQAGVIRLLKKLQQQFGTACLFITHDLR-LVERFCQRVMVMD-NGQIVETQPVGD 238 (268)
T ss_pred EeCCCcccCHHHHHHHHHHHHHHHHHcCcEEEEEECCHH-HHHHhCCEEEEEE-CCEEeeeCChhh
Confidence 99999999999999999999998765 899999999976 4667899999998 579999988643
No 406
>PRK14269 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=9.7e-34 Score=314.17 Aligned_cols=212 Identities=19% Similarity=0.275 Sum_probs=168.8
Q ss_pred eeeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCceeeEEEECCccCCCCC---CCceEEEEecCCCCCCCC
Q 000997 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV---PPRTSAYVSQQDWQVAEM 224 (1194)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~~---~~~~~~yv~Q~d~~~~~l 224 (1194)
+.+|+|+|+++++|++++|+||||||||||+++|+|.+++..+.+|+|+++|+++.... .++.++|++|++.+++ .
T Consensus 15 ~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~G~i~~~g~~i~~~~~~~~~~~i~~~~q~~~l~~-~ 93 (246)
T PRK14269 15 KQALFDINMQIEQNKITALIGASGCGKSTFLRCFNRMNDKIAKIDGLVEIEGKDVKNQDVVALRKNVGMVFQQPNVFV-K 93 (246)
T ss_pred EeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCCceEEEECCEecccCCHHHHhhhEEEEecCCcccc-c
Confidence 36999999999999999999999999999999999987532245899999999876532 2457999999988787 6
Q ss_pred CHHHHHHHhhhccCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhccCcchhHHHHHHHHHhCCcccccccccCccC
Q 000997 225 TVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEML 304 (1194)
Q Consensus 225 TV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~k~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~ 304 (1194)
||+||+.++...++.... . ......++.+++.+||........ +...
T Consensus 94 tv~eni~~~~~~~~~~~~-------------------~-------------~~~~~~~~~~l~~~~l~~~~~~~~-~~~~ 140 (246)
T PRK14269 94 SIYENISYAPKLHGMIKN-------------------K-------------DEEEALVVDCLQKVGLFEEVKDKL-KQNA 140 (246)
T ss_pred cHHHHhhhHHhhcCcccC-------------------h-------------HHHHHHHHHHHHHcCCChhhhHHh-cCCc
Confidence 999999886433211000 0 001223667888999853211111 2334
Q ss_pred CCCChhhhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEcCC
Q 000997 305 KGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEG 384 (1194)
Q Consensus 305 ~~LSGGqkqRvsia~al~~~~~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~~G 384 (1194)
+.|||||||||+|||||+.+|++++|||||+|||+.++..+.+.|+++.+ + ++++.++|..+++.+++|+|++|++|
T Consensus 141 ~~LS~G~~qrv~laral~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~--~-~tiii~tH~~~~~~~~~d~i~~l~~G 217 (246)
T PRK14269 141 LALSGGQQQRLCIARALAIKPKLLLLDEPTSALDPISSGVIEELLKELSH--N-LSMIMVTHNMQQGKRVADYTAFFHLG 217 (246)
T ss_pred ccCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhC--C-CEEEEEecCHHHHHhhCcEEEEEECC
Confidence 67999999999999999999999999999999999999999999998753 3 55666888999999999999999999
Q ss_pred eEEEecChhhHH
Q 000997 385 QIVYQGPRVSVL 396 (1194)
Q Consensus 385 ~iv~~G~~~~~~ 396 (1194)
++++.|+.+++.
T Consensus 218 ~i~~~g~~~~~~ 229 (246)
T PRK14269 218 ELIEFGESKEFF 229 (246)
T ss_pred EEEEECCHHHHH
Confidence 999999987763
No 407
>COG4987 CydC ABC-type transport system involved in cytochrome bd biosynthesis, fused ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=1e-34 Score=330.71 Aligned_cols=202 Identities=26% Similarity=0.391 Sum_probs=165.6
Q ss_pred ceeeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCceeeEEEECCccCCCCCC---CceEEEEecCCCCCCC
Q 000997 147 KLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVP---PRTSAYVSQQDWQVAE 223 (1194)
Q Consensus 147 ~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~ 223 (1194)
+.++|+|+|+++++||.++|+|++|||||||++.|+|-++++ +|+|+.||.++..... ++.+++++|...+| .
T Consensus 350 ~~~~L~~~~l~l~~GEkvAIlG~SGsGKSTllqLl~~~~~~~---~G~i~~~g~~~~~l~~~~~~e~i~vl~Qr~hlF-~ 425 (573)
T COG4987 350 QTKALKNFNLTLAQGEKVAILGRSGSGKSTLLQLLAGAWDPQ---QGSITLNGVEIASLDEQALRETISVLTQRVHLF-S 425 (573)
T ss_pred ccchhhccceeecCCCeEEEECCCCCCHHHHHHHHHhccCCC---CCeeeECCcChhhCChhhHHHHHhhhccchHHH-H
Confidence 346999999999999999999999999999999999999887 9999999998876654 56889999987545 5
Q ss_pred CCHHHHHHHhhhccCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhccCcchhHHHHHHHHHhCC-------ccccc
Q 000997 224 MTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGL-------DTCAD 296 (1194)
Q Consensus 224 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~k~~~~~~~~~~~~~~~~l~~lgL-------~~~~d 296 (1194)
.|+|+||..+... .. |+ .+-++++..|| ++..|
T Consensus 426 ~Tlr~NL~lA~~~----As------------------DE------------------el~~aL~qvgL~~l~~~~p~gl~ 465 (573)
T COG4987 426 GTLRDNLRLANPD----AS------------------DE------------------ELWAALQQVGLEKLLESAPDGLN 465 (573)
T ss_pred HHHHHHHhhcCCC----CC------------------HH------------------HHHHHHHHcCHHHHHHhChhhhh
Confidence 6999999875321 10 01 12233344443 45778
Q ss_pred ccccCccCCCCChhhhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcC
Q 000997 297 TLVGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFD 376 (1194)
Q Consensus 297 t~vg~~~~~~LSGGqkqRvsia~al~~~~~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D 376 (1194)
|.+|+ +.++||||||||++|||+|+.++++++|||||.|||+.|..++++.+.+.++ ++| ++.++|+...+ +.||
T Consensus 466 t~lge-~G~~LSGGE~rRLAlAR~LL~dapl~lLDEPTegLD~~TE~~vL~ll~~~~~--~kT-ll~vTHrL~~l-e~~d 540 (573)
T COG4987 466 TWLGE-GGRRLSGGERRRLALARALLHDAPLWLLDEPTEGLDPITERQVLALLFEHAE--GKT-LLMVTHRLRGL-ERMD 540 (573)
T ss_pred chhcc-CCCcCCchHHHHHHHHHHHHcCCCeEEecCCcccCChhhHHHHHHHHHHHhc--CCe-EEEEecccccH-hhcC
Confidence 99996 4568999999999999999999999999999999999999999999987653 445 55566776654 6789
Q ss_pred eEEEEcCCeEEEecChhhHHH
Q 000997 377 DVILLSEGQIVYQGPRVSVLD 397 (1194)
Q Consensus 377 ~vilL~~G~iv~~G~~~~~~~ 397 (1194)
+|++|++|+++.+|.+.+++.
T Consensus 541 rIivl~~Gkiie~G~~~~Ll~ 561 (573)
T COG4987 541 RIIVLDNGKIIEEGTHAELLA 561 (573)
T ss_pred EEEEEECCeeeecCCHHhhhc
Confidence 999999999999999998864
No 408
>TIGR03873 F420-0_ABC_ATP proposed F420-0 ABC transporter, ATP-binding protein. This small clade of ABC-type transporter ATP-binding protein components is found as a three gene cassette along with a periplasmic substrate-binding protein (TIGR03868) and a permease (TIGR03869). The organisms containing this cassette are all Actinobacteria and all contain numerous genes requiring the coenzyme F420. This model was defined based on five such organisms, four of which are lacking all F420 biosynthetic capability save the final side-chain polyglutamate attachment step (via the gene cofE: TIGR01916). In Jonesia denitrificans DSM 20603 and marine actinobacterium PHSC20C1 this cassette is in an apparent operon with the cofE gene and, in PHSC20C1, also with a F420-dependent glucose-6-phosphate dehydrogenase (TIGR03554). Based on these observations we propose that this ATP-binding protein is a component of an F420-0 (that is, F420 lacking only the polyglutamate tail) transporter.
Probab=100.00 E-value=6.4e-34 Score=317.57 Aligned_cols=208 Identities=28% Similarity=0.403 Sum_probs=170.6
Q ss_pred eeeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCceeeEEEECCccCCCCCC---CceEEEEecCCCCCCCC
Q 000997 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVP---PRTSAYVSQQDWQVAEM 224 (1194)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~l 224 (1194)
..+|+|+|+.+++||+++|+|||||||||||++|+|.+++. +|+|.++|.++..... ++.++|++|++.+++.+
T Consensus 14 ~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~~~ 90 (256)
T TIGR03873 14 RLIVDGVDVTAPPGSLTGLLGPNGSGKSTLLRLLAGALRPD---AGTVDLAGVDLHGLSRRARARRVALVEQDSDTAVPL 90 (256)
T ss_pred EEEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCC---CCEEEECCEEcccCCHHHHhhheEEecccCccCCCC
Confidence 36999999999999999999999999999999999998876 9999999988755322 34699999998778889
Q ss_pred CHHHHHHHhhhccCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhccCcchhHHHHHHHHHhCCcccccccccCccC
Q 000997 225 TVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEML 304 (1194)
Q Consensus 225 TV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~k~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~ 304 (1194)
||+||+.++..... . ... .+. .+....++.+++.+||.+..++.++
T Consensus 91 tv~e~l~~~~~~~~--~-------------~~~-~~~--------------~~~~~~~~~~l~~~~l~~~~~~~~~---- 136 (256)
T TIGR03873 91 TVRDVVALGRIPHR--S-------------LWA-GDS--------------PHDAAVVDRALARTELSHLADRDMS---- 136 (256)
T ss_pred CHHHHHHhcchhhh--h-------------hcc-CCC--------------HHHHHHHHHHHHHcCcHhhhcCCcc----
Confidence 99999987421000 0 000 000 0012246778899999876666554
Q ss_pred CCCChhhhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEcCC
Q 000997 305 KGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEG 384 (1194)
Q Consensus 305 ~~LSGGqkqRvsia~al~~~~~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~~G 384 (1194)
.|||||||||+||+|++.+|++++|||||+|||+.+...+.+.|+++.. . +++|+.++|..+++.+++|+|++|++|
T Consensus 137 -~LS~G~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~-~~tiii~sH~~~~~~~~~d~i~~l~~G 213 (256)
T TIGR03873 137 -TLSGGERQRVHVARALAQEPKLLLLDEPTNHLDVRAQLETLALVRELAA-T-GVTVVAALHDLNLAASYCDHVVVLDGG 213 (256)
T ss_pred -cCCHHHHHHHHHHHHHhcCCCEEEEcCccccCCHHHHHHHHHHHHHHHh-c-CCEEEEEeCCHHHHHHhCCEEEEEeCC
Confidence 6999999999999999999999999999999999999999999999864 2 456667888899999999999999999
Q ss_pred eEEEecChhhH
Q 000997 385 QIVYQGPRVSV 395 (1194)
Q Consensus 385 ~iv~~G~~~~~ 395 (1194)
+++..|+.+++
T Consensus 214 ~i~~~g~~~~~ 224 (256)
T TIGR03873 214 RVVAAGPPREV 224 (256)
T ss_pred CEEEecCHHHh
Confidence 99999988765
No 409
>PRK13639 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.3e-34 Score=320.40 Aligned_cols=204 Identities=27% Similarity=0.373 Sum_probs=169.5
Q ss_pred eeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCceeeEEEECCccCCCCC-----CCceEEEEecCCC-CCC
Q 000997 149 TILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV-----PPRTSAYVSQQDW-QVA 222 (1194)
Q Consensus 149 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~~-----~~~~~~yv~Q~d~-~~~ 222 (1194)
++|+|+|++|++||+++|+||||||||||+++|+|.+++. +|+|+++|.++.... .++.++|++|++. .+.
T Consensus 16 ~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~~~i~~v~q~~~~~~~ 92 (275)
T PRK13639 16 EALKGINFKAEKGEMVALLGPNGAGKSTLFLHFNGILKPT---SGEVLIKGEPIKYDKKSLLEVRKTVGIVFQNPDDQLF 92 (275)
T ss_pred eeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ccEEEECCEECccccchHHHHHhheEEEeeChhhhhc
Confidence 5999999999999999999999999999999999999876 999999998874211 2457999999963 344
Q ss_pred CCCHHHHHHHhhhccCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhccCcchhHHHHHHHHHhCCcccccccccCc
Q 000997 223 EMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDE 302 (1194)
Q Consensus 223 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~k~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~ 302 (1194)
.+||.||+.|.....+.. . .+....+..+++.+||.+..++.++
T Consensus 93 ~~tv~e~i~~~~~~~~~~-~---------------------------------~~~~~~~~~~l~~~~L~~~~~~~~~-- 136 (275)
T PRK13639 93 APTVEEDVAFGPLNLGLS-K---------------------------------EEVEKRVKEALKAVGMEGFENKPPH-- 136 (275)
T ss_pred cccHHHHHHHHHHHcCCC-H---------------------------------HHHHHHHHHHHHHCCCchhhcCChh--
Confidence 579999998753211100 0 0011236778999999887777654
Q ss_pred cCCCCChhhhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEc
Q 000997 303 MLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLS 382 (1194)
Q Consensus 303 ~~~~LSGGqkqRvsia~al~~~~~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~ 382 (1194)
.||||||||++||+||+.+|++++|||||+|||+.++..+.+.|+++++. +++|+.++|..+++.++||++++|+
T Consensus 137 ---~LS~Gq~qrv~laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~~--~~til~vtH~~~~~~~~~d~i~~l~ 211 (275)
T PRK13639 137 ---HLSGGQKKRVAIAGILAMKPEIIVLDEPTSGLDPMGASQIMKLLYDLNKE--GITIIISTHDVDLVPVYADKVYVMS 211 (275)
T ss_pred ---hCCHHHHHHHHHHHHHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHHC--CCEEEEEecCHHHHHHhCCEEEEEE
Confidence 59999999999999999999999999999999999999999999998753 4556668899999999999999999
Q ss_pred CCeEEEecChhhHH
Q 000997 383 EGQIVYQGPRVSVL 396 (1194)
Q Consensus 383 ~G~iv~~G~~~~~~ 396 (1194)
+|++++.|+++++.
T Consensus 212 ~G~i~~~g~~~~~~ 225 (275)
T PRK13639 212 DGKIIKEGTPKEVF 225 (275)
T ss_pred CCEEEEeCCHHHHh
Confidence 99999999988774
No 410
>cd03235 ABC_Metallic_Cations ABC component of the metal-type transporters. This family includes transporters involved in the uptake of various metallic cations such as iron, manganese, and zinc. The ATPases of this group of transporters are very similar to members of iron-siderophore uptake family suggesting that they share a common ancestor. The best characterized metal-type ABC transporters are the YfeABCD system of Y. pestis, the SitABCD system of Salmonella enterica serovar Typhimurium, and the SitABCD transporter of Shigella flexneri. Moreover other uncharacterized homologs of these metal-type transporters are mainly found in pathogens like Haemophilus or enteroinvasive E. coli isolates.
Probab=100.00 E-value=2.3e-34 Score=312.35 Aligned_cols=200 Identities=28% Similarity=0.407 Sum_probs=161.2
Q ss_pred eeeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCceeeEEEECCccCCCCCCCceEEEEecCCCCC--CCCC
Q 000997 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVPPRTSAYVSQQDWQV--AEMT 225 (1194)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~~~~~~~~yv~Q~d~~~--~~lT 225 (1194)
.++|+|+|++|++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++. ..++.++|++|++.+. ..+|
T Consensus 12 ~~~l~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~---~G~i~~~g~~~~--~~~~~i~~v~q~~~~~~~~~~t 86 (213)
T cd03235 12 HPVLEDVSFEVKPGEFLAIVGPNGAGKSTLLKAILGLLKPT---SGSIRVFGKPLE--KERKRIGYVPQRRSIDRDFPIS 86 (213)
T ss_pred EEeeecceeEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCC---CCEEEECCccHH--HHHhheEEeccccccccCCCCc
Confidence 46999999999999999999999999999999999998876 999999998654 2345799999997653 3489
Q ss_pred HHHHHHHhhhccCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhccCcchhHHHHHHHHHhCCcccccccccCccCC
Q 000997 226 VRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEMLK 305 (1194)
Q Consensus 226 V~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~k~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~ 305 (1194)
|+||+.++...... .+.. .. ......++.+++.+||++..++.++
T Consensus 87 v~e~l~~~~~~~~~--~~~~--------------~~--------------~~~~~~~~~~l~~~~l~~~~~~~~~----- 131 (213)
T cd03235 87 VRDVVLMGLYGHKG--LFRR--------------LS--------------KADKAKVDEALERVGLSELADRQIG----- 131 (213)
T ss_pred HHHHHHhccccccc--cccC--------------CC--------------HHHHHHHHHHHHHcCCHHHHhCCcc-----
Confidence 99999875421100 0000 00 0012246788999999876666554
Q ss_pred CCChhhhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEcCCe
Q 000997 306 GISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEGQ 385 (1194)
Q Consensus 306 ~LSGGqkqRvsia~al~~~~~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~~G~ 385 (1194)
.|||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|+++++ . +++++.++|..+++.+++|+|++|++|
T Consensus 132 ~LSgG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~-~~tvi~~sH~~~~~~~~~d~i~~l~~~- 208 (213)
T cd03235 132 ELSGGQQQRVLLARALVQDPDLLLLDEPFAGVDPKTQEDIYELLRELRR-E-GMTILVVTHDLGLVLEYFDRVLLLNRT- 208 (213)
T ss_pred cCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHh-c-CCEEEEEeCCHHHHHHhcCEEEEEcCc-
Confidence 6999999999999999999999999999999999999999999999875 3 455666888999999999999999886
Q ss_pred EEEec
Q 000997 386 IVYQG 390 (1194)
Q Consensus 386 iv~~G 390 (1194)
+++.|
T Consensus 209 ~~~~g 213 (213)
T cd03235 209 VVASG 213 (213)
T ss_pred EeecC
Confidence 66554
No 411
>COG4604 CeuD ABC-type enterochelin transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.6e-35 Score=294.29 Aligned_cols=213 Identities=24% Similarity=0.365 Sum_probs=183.9
Q ss_pred cccccccceEEeeeeeEEEeCCcEEEEEccCCCChHHHHhhhcCCCCCCeeEEEEEEcCccCCh---hcccceeeEeecC
Q 000997 834 QEGVLEDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ---ETFARISGYCEQN 910 (1194)
Q Consensus 834 ~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~---~~~~~~~gyv~Q~ 910 (1194)
+..+.++.+.+|++||..|++|.+++|+|||||||||||.+++++.+ ..+|+|+++|.++.. ...++.++..-|+
T Consensus 6 nv~K~y~~~~vl~~isl~i~~g~iTs~IGPNGAGKSTLLS~~sRL~~--~d~G~i~i~g~~~~~~~s~~LAk~lSILkQ~ 83 (252)
T COG4604 6 NVSKSYGTKVVLDDVSLDIPKGGITSIIGPNGAGKSTLLSMMSRLLK--KDSGEITIDGLELTSTPSKELAKKLSILKQE 83 (252)
T ss_pred hhhHhhCCEEeeccceeeecCCceeEEECCCCccHHHHHHHHHHhcc--ccCceEEEeeeecccCChHHHHHHHHHHHhh
Confidence 34445678899999999999999999999999999999999998766 468999999998643 4567788889998
Q ss_pred CCCCCCCcHHHHHHHHhhhcCCCcCcHHHHHHHHHHHHHHcCCCcccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCEE
Q 000997 911 DIHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIV 990 (1194)
Q Consensus 911 ~~~~~~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~il 990 (1194)
......+||+|-+.|+-.-.. .....++.+..++++++.++|+++.|... .+||||||||.-||+.|+++.+.+
T Consensus 84 N~i~~rlTV~dLv~FGRfPYS-qGRlt~eD~~~I~~aieyl~L~~l~dryL-----d~LSGGQrQRAfIAMVlaQdTdyv 157 (252)
T COG4604 84 NHINSRLTVRDLVGFGRFPYS-QGRLTKEDRRIINEAIEYLHLEDLSDRYL-----DELSGGQRQRAFIAMVLAQDTDYV 157 (252)
T ss_pred chhhheeEHHHHhhcCCCccc-CCCCchHHHHHHHHHHHHhcccchHHHhH-----HhcccchhhhhhhheeeeccCcEE
Confidence 888889999999999732211 22334566678999999999999999875 589999999999999999999999
Q ss_pred EEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCeEEEEccCcEEEEeCCCCC
Q 000997 991 FMDEPTSGLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLGS 1056 (1194)
Q Consensus 991 lLDEPTsgLD~~~~~~i~~~l~~l~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~~~ 1056 (1194)
+||||.++||...+..+|+.||+++++ |+|||++.||.+. ...+.|+++-|+ +|+++..|++.+
T Consensus 158 lLDEPLNNLDmkHsv~iMk~Lrrla~el~KtiviVlHDINf-AS~YsD~IVAlK-~G~vv~~G~~~e 222 (252)
T COG4604 158 LLDEPLNNLDMKHSVQIMKILRRLADELGKTIVVVLHDINF-ASCYSDHIVALK-NGKVVKQGSPDE 222 (252)
T ss_pred EecCcccccchHHHHHHHHHHHHHHHHhCCeEEEEEecccH-HHhhhhheeeec-CCEEEecCCHHH
Confidence 999999999999999999999999876 9999999999874 345679999998 589999999754
No 412
>PRK13638 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.3e-34 Score=320.65 Aligned_cols=204 Identities=26% Similarity=0.349 Sum_probs=168.4
Q ss_pred eeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCceeeEEEECCccCCCC-----CCCceEEEEecCCC-CCC
Q 000997 149 TILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEF-----VPPRTSAYVSQQDW-QVA 222 (1194)
Q Consensus 149 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~-----~~~~~~~yv~Q~d~-~~~ 222 (1194)
.+|+|+|++|++|++++|+|||||||||||++|+|.++|. +|+|.++|.++... ..++.++|++|++. .+.
T Consensus 15 ~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~~~i~~v~q~~~~~~~ 91 (271)
T PRK13638 15 PVLKGLNLDFSLSPVTGLVGANGCGKSTLFMNLSGLLRPQ---KGAVLWQGKPLDYSKRGLLALRQQVATVFQDPEQQIF 91 (271)
T ss_pred ccccceEEEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCC---ccEEEECCEEcccccCCHHHHHhheEEEeeChhhccc
Confidence 5999999999999999999999999999999999999876 99999999887421 12357999999975 345
Q ss_pred CCCHHHHHHHhhhccCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhccCcchhHHHHHHHHHhCCcccccccccCc
Q 000997 223 EMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDE 302 (1194)
Q Consensus 223 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~k~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~ 302 (1194)
..|+.||+.+.....+... .+....++.+++.+||.+..++.+
T Consensus 92 ~~~~~~~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~--- 134 (271)
T PRK13638 92 YTDIDSDIAFSLRNLGVPE----------------------------------AEITRRVDEALTLVDAQHFRHQPI--- 134 (271)
T ss_pred cccHHHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCCHhHhcCCc---
Confidence 5689999987543221100 001123677889999987777655
Q ss_pred cCCCCChhhhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEc
Q 000997 303 MLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLS 382 (1194)
Q Consensus 303 ~~~~LSGGqkqRvsia~al~~~~~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~ 382 (1194)
..|||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|++++.. +++|+.++|+.+++.+++|++++|+
T Consensus 135 --~~LSgG~~qrl~laraL~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~--g~tii~vtH~~~~~~~~~d~i~~l~ 210 (271)
T PRK13638 135 --QCLSHGQKKRVAIAGALVLQARYLLLDEPTAGLDPAGRTQMIAIIRRIVAQ--GNHVIISSHDIDLIYEISDAVYVLR 210 (271)
T ss_pred --hhCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHhCCEEEEEE
Confidence 469999999999999999999999999999999999999999999998643 4556668899999999999999999
Q ss_pred CCeEEEecChhhHH
Q 000997 383 EGQIVYQGPRVSVL 396 (1194)
Q Consensus 383 ~G~iv~~G~~~~~~ 396 (1194)
+|++++.|+.+++.
T Consensus 211 ~G~i~~~g~~~~~~ 224 (271)
T PRK13638 211 QGQILTHGAPGEVF 224 (271)
T ss_pred CCEEEEeCCHHHHh
Confidence 99999999987764
No 413
>PRK13642 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1e-33 Score=318.96 Aligned_cols=205 Identities=20% Similarity=0.289 Sum_probs=169.4
Q ss_pred eeeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCceeeEEEECCccCCCCC---CCceEEEEecCCC-CCCC
Q 000997 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV---PPRTSAYVSQQDW-QVAE 223 (1194)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~~---~~~~~~yv~Q~d~-~~~~ 223 (1194)
..+|+|+|+++++||+++|+||||||||||+++|+|.+++. +|+|.++|.++.... .++.++|++|++. .++.
T Consensus 20 ~~~l~~v~l~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~i~~~~~~~~~~~i~~v~q~~~~~~~~ 96 (277)
T PRK13642 20 VNQLNGVSFSITKGEWVSIIGQNGSGKSTTARLIDGLFEEF---EGKVKIDGELLTAENVWNLRRKIGMVFQNPDNQFVG 96 (277)
T ss_pred CeeeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCC---CCEEEECCEECCcCCHHHHhcceEEEEECHHHhhcc
Confidence 35999999999999999999999999999999999999876 999999998875422 2467999999974 6778
Q ss_pred CCHHHHHHHhhhccCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhccCcchhHHHHHHHHHhCCcccccccccCcc
Q 000997 224 MTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEM 303 (1194)
Q Consensus 224 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~k~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~ 303 (1194)
.||.|||.++....+.. . .+....++.+++.+||.+..++.+
T Consensus 97 ~tv~eni~~~~~~~~~~-~---------------------------------~~~~~~~~~~l~~~~l~~~~~~~~---- 138 (277)
T PRK13642 97 ATVEDDVAFGMENQGIP-R---------------------------------EEMIKRVDEALLAVNMLDFKTREP---- 138 (277)
T ss_pred CCHHHHHHhhHHHcCCC-H---------------------------------HHHHHHHHHHHHHCCCHhHhhCCc----
Confidence 89999998754321110 0 000124678889999987766654
Q ss_pred CCCCChhhhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEcC
Q 000997 304 LKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSE 383 (1194)
Q Consensus 304 ~~~LSGGqkqRvsia~al~~~~~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~~ 383 (1194)
..|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++++.. +++|+.++|..+++. .+|+|++|++
T Consensus 139 -~~LS~G~~qrv~lAraL~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~~-g~tiil~sH~~~~~~-~~d~i~~l~~ 215 (277)
T PRK13642 139 -ARLSGGQKQRVAVAGIIALRPEIIILDESTSMLDPTGRQEIMRVIHEIKEKY-QLTVLSITHDLDEAA-SSDRILVMKA 215 (277)
T ss_pred -ccCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhc-CCEEEEEeCCHHHHH-hCCEEEEEEC
Confidence 4699999999999999999999999999999999999999999999887533 445666788888886 6999999999
Q ss_pred CeEEEecChhhHH
Q 000997 384 GQIVYQGPRVSVL 396 (1194)
Q Consensus 384 G~iv~~G~~~~~~ 396 (1194)
|+++..|+.+++.
T Consensus 216 G~i~~~g~~~~~~ 228 (277)
T PRK13642 216 GEIIKEAAPSELF 228 (277)
T ss_pred CEEEEeCCHHHHh
Confidence 9999999988764
No 414
>cd03252 ABCC_Hemolysin The ABC-transporter hemolysin B is a central component of the secretion machinery that translocates the toxin, hemolysin A, in a Sec-independent fashion across both membranes of E. coli. The hemolysin A (HlyA) transport machinery is composed of the ATP-binding cassette (ABC) transporter HlyB located in the inner membrane, hemolysin D (HlyD), also anchored in the inner membrane, and TolC, which resides in the outer membrane. HlyD apparently forms a continuous channel that bridges the entire periplasm, interacting with TolC and HlyB. This arrangement prevents the appearance of periplasmic intermediates of HlyA during substrate transport. Little is known about the molecular details of HlyA transport, but it is evident that ATP-hydrolysis by the ABC-transporter HlyB is a necessary source of energy.
Probab=100.00 E-value=1.9e-34 Score=318.24 Aligned_cols=196 Identities=26% Similarity=0.414 Sum_probs=154.4
Q ss_pred eEEeeeeeEEEeCCcEEEEEccCCCChHHHHhhhcCCCCCCeeEEEEEEcCccCCh---hcccceeeEeecCCCCCCCCc
Q 000997 842 LQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ---ETFARISGYCEQNDIHSPGLT 918 (1194)
Q Consensus 842 ~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~---~~~~~~~gyv~Q~~~~~~~lT 918 (1194)
+.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++.. ..+++.+||++|++.+++ .|
T Consensus 15 ~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~-~t 91 (237)
T cd03252 15 PVILDNISLRIKPGEVVGIVGRSGSGKSTLTKLIQRFYV--PENGRVLVDGHDLALADPAWLRRQVGVVLQENVLFN-RS 91 (237)
T ss_pred ccceeceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcC--CCCCEEEECCeehHhcCHHHHhhcEEEEcCCchhcc-ch
Confidence 469999999999999999999999999999999999876 468999999987532 334667999999987764 69
Q ss_pred HHHHHHHHhhhcCCCcCcHHHHH-----HHHHHHHHHc--CCCcccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCEEE
Q 000997 919 VLESLLFSAWLRLPSEIELETQR-----AFVEEVMELV--ELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVF 991 (1194)
Q Consensus 919 v~e~l~f~~~lr~~~~~~~~~~~-----~~v~~~l~~l--~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~ill 991 (1194)
|.||+.+... ........ ...++.++.+ ++....+. .+..|||||||||+|||+|+.+|++|+
T Consensus 92 v~~nl~~~~~-----~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~-----~~~~LSgG~~qrv~laral~~~p~lll 161 (237)
T cd03252 92 IRDNIALADP-----GMSMERVIEAAKLAGAHDFISELPEGYDTIVGE-----QGAGLSGGQRQRIAIARALIHNPRILI 161 (237)
T ss_pred HHHHhhccCC-----CCCHHHHHHHHHHcCcHHHHHhCcccccchhhc-----CCCcCCHHHHHHHHHHHHHhhCCCEEE
Confidence 9999987431 11111100 0112223322 22222222 246899999999999999999999999
Q ss_pred EeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCeEEEEccCcEEEEeCCC
Q 000997 992 MDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1194)
Q Consensus 992 LDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~ 1054 (1194)
|||||+|||+.+...+.+.|++++ +|+|||+++|+++ .+ +.+|++++|. +|++++.|+.
T Consensus 162 lDEP~~~LD~~~~~~l~~~l~~~~-~~~tiii~sH~~~-~~-~~~d~v~~l~-~G~i~~~~~~ 220 (237)
T cd03252 162 FDEATSALDYESEHAIMRNMHDIC-AGRTVIIIAHRLS-TV-KNADRIIVME-KGRIVEQGSH 220 (237)
T ss_pred EeCCcccCCHHHHHHHHHHHHHhc-CCCEEEEEeCCHH-HH-HhCCEEEEEE-CCEEEEEcCH
Confidence 999999999999999999999986 4899999999986 34 5699999998 4799998875
No 415
>COG4618 ArpD ABC-type protease/lipase transport system, ATPase and permease components [General function prediction only]
Probab=100.00 E-value=2.4e-34 Score=324.28 Aligned_cols=235 Identities=26% Similarity=0.387 Sum_probs=186.9
Q ss_pred hcCCCCCCceEEEeeeEEEEEEecCCCCCCChhHHHHHHHHHHHHHHhHhcCCCcceeeeecceEeEeCCeEEEEEcCCC
Q 000997 92 AVDLELPKIEVRFQNLTVESFVHLGSRALPTIPNFIFNMTEALLRQLRIYRGNRSKLTILDDLSGIIRPSRLTLLLGPPS 171 (1194)
Q Consensus 92 ~~~~~~p~~~v~~~~l~v~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~llGp~G 171 (1194)
+..++-|+-.+..|++++-- ...++++|+|+||.+.+|+-++|+||||
T Consensus 325 ~m~LP~P~g~L~Ve~l~~~P--------------------------------Pg~~~pil~~isF~l~~G~~lgIIGPSg 372 (580)
T COG4618 325 RMPLPAPQGALSVERLTAAP--------------------------------PGQKKPILKGISFALQAGEALGIIGPSG 372 (580)
T ss_pred CCCCCCCCceeeEeeeeecC--------------------------------CCCCCcceecceeEecCCceEEEECCCC
Confidence 45566677788888887521 1134679999999999999999999999
Q ss_pred CcHHHHHHHHhcCcCCCCceeeEEEECCccCCCCCC---CceEEEEecCCCCCCCCCHHHHHHHhhhccCCCCchhhhHH
Q 000997 172 SGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVP---PRTSAYVSQQDWQVAEMTVRETLDFAGQCQGVGSKYDMITE 248 (1194)
Q Consensus 172 sGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~ 248 (1194)
||||||.++|.|..+|. +|.|.+||.++++.+. .+.+||.||+--+|+ .||.|||. |+.. ...-+.+.+
T Consensus 373 SGKSTLaR~lvG~w~p~---~G~VRLDga~l~qWd~e~lG~hiGYLPQdVeLF~-GTIaeNIa---Rf~~-~~d~~kIie 444 (580)
T COG4618 373 SGKSTLARLLVGIWPPT---SGSVRLDGADLRQWDREQLGRHIGYLPQDVELFD-GTIAENIA---RFGE-EADPEKVIE 444 (580)
T ss_pred ccHHHHHHHHHcccccC---CCcEEecchhhhcCCHHHhccccCcCcccceecC-CcHHHHHH---hccc-cCCHHHHHH
Confidence 99999999999998775 9999999999887654 488999999987776 59999994 2211 111122222
Q ss_pred HHHHHHHhCCCCCchHHHHHHHhhccCcchhHHHHHHHHHhCCcccccccccCccCCCCChhhhhHHHHHHHHhCCCcEe
Q 000997 249 LARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEMLKGISGGQKKRLTTGELLVGPARVL 328 (1194)
Q Consensus 249 ~~~~e~~~~~~~~~d~~~~~k~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~LSGGqkqRvsia~al~~~~~vl 328 (1194)
+++. .+ +.++ ++.|++.+||.||+.+ .+||||||||+++|||++++|.++
T Consensus 445 AA~l---------------------Ag------vHel--Il~lP~GYdT~iG~~G-~~LSgGQRQRIaLARAlYG~P~lv 494 (580)
T COG4618 445 AARL---------------------AG------VHEL--ILRLPQGYDTRIGEGG-ATLSGGQRQRIALARALYGDPFLV 494 (580)
T ss_pred HHHH---------------------cC------hHHH--HHhCcCCccCccCCCC-CCCCchHHHHHHHHHHHcCCCcEE
Confidence 2211 11 1111 4679999999999754 589999999999999999999999
Q ss_pred EEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEcCCeEEEecChhhHHHHH
Q 000997 329 FMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEGQIVYQGPRVSVLDFF 399 (1194)
Q Consensus 329 llDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~~G~iv~~G~~~~~~~~F 399 (1194)
+||||-|.||+.....+.+.+.+... .|+++|+ ++| .+.+...+|+|++|++|++..+|+++|++...
T Consensus 495 VLDEPNsNLD~~GE~AL~~Ai~~~k~-rG~~vvv-iaH-RPs~L~~~Dkilvl~~G~~~~FG~r~eVLa~~ 562 (580)
T COG4618 495 VLDEPNSNLDSEGEAALAAAILAAKA-RGGTVVV-IAH-RPSALASVDKILVLQDGRIAAFGPREEVLAKV 562 (580)
T ss_pred EecCCCCCcchhHHHHHHHHHHHHHH-cCCEEEE-Eec-CHHHHhhcceeeeecCChHHhcCCHHHHHHHh
Confidence 99999999999999999999998764 4555555 433 56788999999999999999999999998754
No 416
>PRK03695 vitamin B12-transporter ATPase; Provisional
Probab=100.00 E-value=5.5e-34 Score=316.11 Aligned_cols=197 Identities=25% Similarity=0.383 Sum_probs=166.9
Q ss_pred EeeeeeEEEeCCcEEEEEccCCCChHHHHhhhcCCCCCCeeEEEEEEcCccCCh---hcccceeeEeecCCCCCCCCcHH
Q 000997 844 LLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ---ETFARISGYCEQNDIHSPGLTVL 920 (1194)
Q Consensus 844 iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~---~~~~~~~gyv~Q~~~~~~~lTv~ 920 (1194)
+|+||||++++||+++|+|+||||||||+++|+|..+ .+|+|.++|.++.. ..+++.+||++|++.+++.+|++
T Consensus 11 ~l~~vsl~i~~Gei~~l~G~nGsGKSTLl~~l~Gl~~---~~G~i~~~g~~i~~~~~~~~~~~i~~v~q~~~~~~~~tv~ 87 (248)
T PRK03695 11 RLGPLSAEVRAGEILHLVGPNGAGKSTLLARMAGLLP---GSGSIQFAGQPLEAWSAAELARHRAYLSQQQTPPFAMPVF 87 (248)
T ss_pred eecceEEEEcCCCEEEEECCCCCCHHHHHHHHcCCCC---CCeEEEECCEecCcCCHHHHhhheEEecccCccCCCccHH
Confidence 7899999999999999999999999999999999864 27999999987642 23345689999998888889999
Q ss_pred HHHHHHhhhcCCCcCcHHHHHHHHHHHHHHcCCCcccCCcccCCCCCCCCHHHHHHHHHHHHHhh-------CCCEEEEe
Q 000997 921 ESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVA-------NPSIVFMD 993 (1194)
Q Consensus 921 e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~-------~p~illLD 993 (1194)
||+.+..... .......+.++++++.+++.+..+..+ ..||||||||++||++|+. +|++|+||
T Consensus 88 ~nl~~~~~~~----~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrv~la~al~~~~~~~~p~p~llllD 158 (248)
T PRK03695 88 QYLTLHQPDK----TRTEAVASALNEVAEALGLDDKLGRSV-----NQLSGGEWQRVRLAAVVLQVWPDINPAGQLLLLD 158 (248)
T ss_pred HHHHhcCccC----CCcHHHHHHHHHHHHHcCCHhHhcCCc-----ccCCHHHHHHHHHHHHHhccccccCCCCCEEEEc
Confidence 9998753211 122233456788999999977666543 5799999999999999997 67999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCeEEEEccCcEEEEeCCC
Q 000997 994 EPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1194)
Q Consensus 994 EPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~ 1054 (1194)
|||+|||+.++..+.+.|++++++|.|||+++|+++ ++.+.+|++++|+ +|+++..|+.
T Consensus 159 EPt~~LD~~~~~~l~~~L~~~~~~~~tvi~~sH~~~-~~~~~~d~i~~l~-~G~i~~~g~~ 217 (248)
T PRK03695 159 EPMNSLDVAQQAALDRLLSELCQQGIAVVMSSHDLN-HTLRHADRVWLLK-QGKLLASGRR 217 (248)
T ss_pred CCcccCCHHHHHHHHHHHHHHHhCCCEEEEEecCHH-HHHHhCCEEEEEE-CCEEEEECCH
Confidence 999999999999999999999877999999999976 4778899999998 5799998875
No 417
>PRK11288 araG L-arabinose transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.9e-34 Score=349.40 Aligned_cols=204 Identities=27% Similarity=0.345 Sum_probs=170.6
Q ss_pred ceEEeeeeeEEEeCCcEEEEEccCCCChHHHHhhhcCCCCCCeeEEEEEEcCccCCh----hcccceeeEeecCCCCCCC
Q 000997 841 RLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ----ETFARISGYCEQNDIHSPG 916 (1194)
Q Consensus 841 ~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~----~~~~~~~gyv~Q~~~~~~~ 916 (1194)
++.+|+||||++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++.. ..+++.+||++|++.+++.
T Consensus 16 ~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--p~~G~I~~~g~~i~~~~~~~~~~~~i~~v~q~~~~~~~ 93 (501)
T PRK11288 16 GVKALDDISFDCRAGQVHALMGENGAGKSTLLKILSGNYQ--PDAGSILIDGQEMRFASTTAALAAGVAIIYQELHLVPE 93 (501)
T ss_pred CEEEEeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhCCCC--CCCCEEEECCEECCCCCHHHHHhCCEEEEEechhccCC
Confidence 4579999999999999999999999999999999999876 468999999987632 2245679999999988999
Q ss_pred CcHHHHHHHHhhhcCCCcCcHHHHHHHHHHHHHHcCCCcccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCC
Q 000997 917 LTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPT 996 (1194)
Q Consensus 917 lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEPT 996 (1194)
+||.||+.+.............+..+.++++++.+++.+..+.. +..|||||||||+||++|+.+|+||||||||
T Consensus 94 ~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LSgGq~qrv~laral~~~p~lllLDEPt 168 (501)
T PRK11288 94 MTVAENLYLGQLPHKGGIVNRRLLNYEAREQLEHLGVDIDPDTP-----LKYLSIGQRQMVEIAKALARNARVIAFDEPT 168 (501)
T ss_pred CCHHHHHHhcccccccCCCCHHHHHHHHHHHHHHcCCCCCcCCc-----hhhCCHHHHHHHHHHHHHHhCCCEEEEcCCC
Confidence 99999998853211111112333445688899999997665554 3589999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCeEEEEccCcEEEEeCC
Q 000997 997 SGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGP 1053 (1194)
Q Consensus 997 sgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~ 1053 (1194)
+|||+.+...+++.|++++++|+|||++||+++ .+...||++++|++ |+++..++
T Consensus 169 ~~LD~~~~~~l~~~l~~~~~~g~tiiiitHd~~-~~~~~~d~i~~l~~-G~i~~~~~ 223 (501)
T PRK11288 169 SSLSAREIEQLFRVIRELRAEGRVILYVSHRME-EIFALCDAITVFKD-GRYVATFD 223 (501)
T ss_pred CCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEeecC
Confidence 999999999999999999878999999999986 46678999999985 78877665
No 418
>COG1129 MglA ABC-type sugar transport system, ATPase component [Carbohydrate transport and metabolism]
Probab=100.00 E-value=4.8e-34 Score=331.23 Aligned_cols=225 Identities=25% Similarity=0.366 Sum_probs=189.8
Q ss_pred ccccccccceEEeeeeeEEEeCCcEEEEEccCCCChHHHHhhhcCCCCCCeeEEEEEEcCccCCh----hcccceeeEee
Q 000997 833 KQEGVLEDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ----ETFARISGYCE 908 (1194)
Q Consensus 833 ~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~----~~~~~~~gyv~ 908 (1194)
++..+.++..++|+||||+++|||++||||.||||||||+|+|+|... +.+|+|.++|.+... .....-++.|.
T Consensus 12 ~~i~K~FggV~AL~~v~l~v~~GEV~aL~GeNGAGKSTLmKiLsGv~~--p~~G~I~~~G~~~~~~sp~~A~~~GI~~V~ 89 (500)
T COG1129 12 RGISKSFGGVKALDGVSLTVRPGEVHALLGENGAGKSTLMKILSGVYP--PDSGEILIDGKPVAFSSPRDALAAGIATVH 89 (500)
T ss_pred ecceEEcCCceeeccceeEEeCceEEEEecCCCCCHHHHHHHHhCccc--CCCceEEECCEEccCCCHHHHHhCCcEEEe
Confidence 344445677899999999999999999999999999999999999876 579999999997642 33456789999
Q ss_pred cCCCCCCCCcHHHHHHHHhhhcC-CCcCcHHHHHHHHHHHHHHcCCCcccCCcccCCCCCCCCHHHHHHHHHHHHHhhCC
Q 000997 909 QNDIHSPGLTVLESLLFSAWLRL-PSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANP 987 (1194)
Q Consensus 909 Q~~~~~~~lTv~e~l~f~~~lr~-~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p 987 (1194)
|+..+.|++||.||+.++...+. ..-+......+...++|+.+++....++.+ ..||+||||.|.|||||..++
T Consensus 90 QEl~L~p~LsVaeNifLgre~~~~~g~id~~~m~~~A~~~l~~lg~~~~~~~~v-----~~LsiaqrQ~VeIArAl~~~a 164 (500)
T COG1129 90 QELSLVPNLSVAENIFLGREPTRRFGLIDRKAMRRRARELLARLGLDIDPDTLV-----GDLSIAQRQMVEIARALSFDA 164 (500)
T ss_pred echhccCCccHHHHhhcccccccCCCccCHHHHHHHHHHHHHHcCCCCChhhhh-----hhCCHHHHHHHHHHHHHhcCC
Confidence 99999999999999987755443 123456666778889999999863355554 579999999999999999999
Q ss_pred CEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCeEEEEccCcEEEEeCCC-CCc-hhHHHHHH
Q 000997 988 SIVFMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL-GSK-SCELIKYF 1065 (1194)
Q Consensus 988 ~illLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~-~~~-~~~~~~~f 1065 (1194)
+||+||||||.|+......+.+.++++.++|.+||++||.++ ++++.|||+.||.+ |+++..++. ++. ..++++..
T Consensus 165 rllIlDEPTaaLt~~E~~~Lf~~ir~Lk~~Gv~ii~ISHrl~-Ei~~i~DritVlRD-G~~v~~~~~~~~~~~~~lv~~M 242 (500)
T COG1129 165 RVLILDEPTAALTVKETERLFDLIRRLKAQGVAIIYISHRLD-EVFEIADRITVLRD-GRVVGTRPTAAETSEDELVRLM 242 (500)
T ss_pred CEEEEcCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEcCcHH-HHHHhcCEEEEEeC-CEEeeecccccCCCHHHHHHHh
Confidence 999999999999999999999999999999999999999987 89999999999985 788888883 433 34555554
Q ss_pred H
Q 000997 1066 E 1066 (1194)
Q Consensus 1066 ~ 1066 (1194)
-
T Consensus 243 v 243 (500)
T COG1129 243 V 243 (500)
T ss_pred h
Confidence 3
No 419
>cd03300 ABC_PotA_N PotA is an ABC-type transporter and the ATPase component of the spermidine/putrescine-preferential uptake system consisting of PotA, -B, -C, and -D. PotA has two domains with the N-terminal domain containing the ATPase activity and the residues required for homodimerization with PotA and heterdimerization with PotB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=7.9e-34 Score=312.03 Aligned_cols=206 Identities=26% Similarity=0.332 Sum_probs=172.8
Q ss_pred eeeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCceeeEEEECCccCCCCC-CCceEEEEecCCCCCCCCCH
Q 000997 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV-PPRTSAYVSQQDWQVAEMTV 226 (1194)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~~-~~~~~~yv~Q~d~~~~~lTV 226 (1194)
+++|+|+|++++||++++|+||||||||||+++|+|.+++. +|+|+++|.++.... .++.++|++|++..++.+||
T Consensus 13 ~~il~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~g~~~~~---~G~i~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~t~ 89 (232)
T cd03300 13 FVALDGVSLDIKEGEFFTLLGPSGCGKTTLLRLIAGFETPT---SGEILLDGKDITNLPPHKRPVNTVFQNYALFPHLTV 89 (232)
T ss_pred eeeeccceEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCC---ceEEEECCEEcCcCChhhcceEEEecccccCCCCcH
Confidence 36999999999999999999999999999999999999876 899999998876433 24679999999988889999
Q ss_pred HHHHHHhhhccCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhccCcchhHHHHHHHHHhCCcccccccccCccCCC
Q 000997 227 RETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEMLKG 306 (1194)
Q Consensus 227 ~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~k~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~ 306 (1194)
+||+.+.....+.. . ......++.+++.+||++..++.+ ..
T Consensus 90 ~~nl~~~~~~~~~~--~--------------------------------~~~~~~~~~~l~~~~l~~~~~~~~-----~~ 130 (232)
T cd03300 90 FENIAFGLRLKKLP--K--------------------------------AEIKERVAEALDLVQLEGYANRKP-----SQ 130 (232)
T ss_pred HHHHHHHHHhcCCC--H--------------------------------HHHHHHHHHHHHHcCCchhhcCCh-----hh
Confidence 99998764332110 0 001223678899999987777655 46
Q ss_pred CChhhhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEcCCeE
Q 000997 307 ISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEGQI 386 (1194)
Q Consensus 307 LSGGqkqRvsia~al~~~~~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~~G~i 386 (1194)
|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|++++...+ .+|+.++|...++.+++|++++|++|++
T Consensus 131 lS~G~~qrl~laral~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~~~~-~tiii~sh~~~~~~~~~d~i~~l~~G~~ 209 (232)
T cd03300 131 LSGGQQQRVAIARALVNEPKVLLLDEPLGALDLKLRKDMQLELKRLQKELG-ITFVFVTHDQEEALTMSDRIAVMNKGKI 209 (232)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcC-CEEEEEeCCHHHHHHhcCEEEEEECCEE
Confidence 999999999999999999999999999999999999999999999875333 4555577888889999999999999999
Q ss_pred EEecChhhHH
Q 000997 387 VYQGPRVSVL 396 (1194)
Q Consensus 387 v~~G~~~~~~ 396 (1194)
++.|+.+++.
T Consensus 210 ~~~~~~~~~~ 219 (232)
T cd03300 210 QQIGTPEEIY 219 (232)
T ss_pred EecCCHHHHH
Confidence 9999876653
No 420
>PRK14235 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.1e-33 Score=317.11 Aligned_cols=212 Identities=21% Similarity=0.292 Sum_probs=167.8
Q ss_pred eeeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCC--CceeeEEEECCccCCCC-----CCCceEEEEecCCCC
Q 000997 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHH--LQVSGKITYNGHGFKEF-----VPPRTSAYVSQQDWQ 220 (1194)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~--~~~~G~i~~~G~~~~~~-----~~~~~~~yv~Q~d~~ 220 (1194)
..+|+|+|+.|+||++++|+|||||||||||++|+|.+++. .+.+|+|+++|.++... ..++.++|++|++..
T Consensus 32 ~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~I~~~g~~i~~~~~~~~~~~~~i~~v~q~~~~ 111 (267)
T PRK14235 32 KQALFDVDLDIPEKTVTAFIGPSGCGKSTFLRCLNRMNDTIDGCRVTGKITLDGEDIYDPRLDVVELRARVGMVFQKPNP 111 (267)
T ss_pred EEEEEEEEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCceEEEECCEECcccccchHHHhhceEEEecCCCC
Confidence 35999999999999999999999999999999999998641 13489999999887531 124679999999887
Q ss_pred CCCCCHHHHHHHhhhccCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhccCcchhHHHHHHHHHhCCccccccccc
Q 000997 221 VAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVG 300 (1194)
Q Consensus 221 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~k~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg 300 (1194)
++. ||.||+.|+...++..... ......++.+++.+||.+......
T Consensus 112 ~~~-tv~enl~~~~~~~~~~~~~--------------------------------~~~~~~~~~~l~~~~l~~~~~~~~- 157 (267)
T PRK14235 112 FPK-SIYENVAYGPRIHGLARSK--------------------------------AELDEIVETSLRKAGLWEEVKDRL- 157 (267)
T ss_pred CCC-cHHHHHHHHHHhcccccch--------------------------------HHHHHHHHHHHHHcCCchhhhHHh-
Confidence 774 9999998865332110000 001123677888899864211111
Q ss_pred CccCCCCChhhhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEE
Q 000997 301 DEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVIL 380 (1194)
Q Consensus 301 ~~~~~~LSGGqkqRvsia~al~~~~~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vil 380 (1194)
+..++.|||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|+++++ + .+|+.++|+.+++..++|++++
T Consensus 158 ~~~~~~LSgGq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~l~~--~-~tiiivtH~~~~~~~~~d~v~~ 234 (267)
T PRK14235 158 HEPGTGLSGGQQQRLCIARAIAVSPEVILMDEPCSALDPIATAKVEELIDELRQ--N-YTIVIVTHSMQQAARVSQRTAF 234 (267)
T ss_pred hCCcccCCHHHHHHHHHHHHHHcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHhc--C-CeEEEEEcCHHHHHhhCCEEEE
Confidence 123457999999999999999999999999999999999999999999998854 3 4566688888999999999999
Q ss_pred EcCCeEEEecChhhHH
Q 000997 381 LSEGQIVYQGPRVSVL 396 (1194)
Q Consensus 381 L~~G~iv~~G~~~~~~ 396 (1194)
|++|+++.+|+.+++.
T Consensus 235 l~~G~i~~~g~~~~~~ 250 (267)
T PRK14235 235 FHLGNLVEVGDTEKMF 250 (267)
T ss_pred EECCEEEEeCCHHHHH
Confidence 9999999999887763
No 421
>PRK14265 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=9.9e-34 Score=318.41 Aligned_cols=219 Identities=21% Similarity=0.265 Sum_probs=171.2
Q ss_pred eeEeecceeeeecccccccccccccceEEeeeeeEEEeCCcEEEEEccCCCChHHHHhhhcCCCCCC---eeEEEEEEcC
Q 000997 816 SMAFGNINYFVDVPVELKQEGVLEDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGG---IIEGDIYISG 892 (1194)
Q Consensus 816 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~---~~~G~i~i~g 892 (1194)
.+.++|+++.+ +++.+|+|+|+++++||+++|+||||||||||+++|+|..... +.+|+|.++|
T Consensus 20 ~l~~~nl~~~~-------------~~~~~l~~vs~~i~~Ge~~~IiG~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g 86 (274)
T PRK14265 20 VFEVEGVKVFY-------------GGFLALVDVHLKIPAKKIIAFIGPSGCGKSTLLRCFNRMNDLIPGAKVEGRLLYRD 86 (274)
T ss_pred eEEEeeEEEEe-------------CCeEEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhcccccccCCCcCceEEECC
Confidence 46667776544 3357999999999999999999999999999999999975321 2479999999
Q ss_pred ccCCh-----hcccceeeEeecCCCCCCCCcHHHHHHHHhhhcCCCcCcHHHHHHHHHHHHHHcCCCcccCCcccCCCCC
Q 000997 893 YPKRQ-----ETFARISGYCEQNDIHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGIN 967 (1194)
Q Consensus 893 ~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~ 967 (1194)
.++.. ..+++.++|++|++.+++. |+.||+.+....+. .. ....+.+++.++.+++......... ..+.
T Consensus 87 ~~l~~~~~~~~~~~~~i~~v~q~~~l~~~-tv~~nl~~~~~~~~---~~-~~~~~~~~~~l~~~~l~~~l~~~~~-~~~~ 160 (274)
T PRK14265 87 RNIYDSQINSVKLRRQVGMVFQRPNPFPK-SIYENIAFAPRANG---YK-GNLDELVEDSLRRAAIWEEVKDKLK-EKGT 160 (274)
T ss_pred EecccccchhHHHhhcEEEEccCCccccc-cHHHHHHhHHHhcC---ch-HHHHHHHHHHHHHcccchhhHHHhc-CCcc
Confidence 87531 2345679999999888765 99999987643321 11 1122345677777776421111111 1236
Q ss_pred CCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCeEEEEc----
Q 000997 968 GLSTEQRKRLTIAVELVANPSIVFMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMK---- 1043 (1194)
Q Consensus 968 ~LSgGqrqrl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~~d~~~~l~---- 1043 (1194)
.|||||||||+|||||+.+|++|||||||+|||+.+...+.+.|+++.+ ++|||+++|+++ .+.+.+|++++|+
T Consensus 161 ~LSgGq~qrv~LAraL~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~-~~tiii~sH~~~-~~~~~~d~i~~l~~~~~ 238 (274)
T PRK14265 161 ALSGGQQQRLCIARAIAMKPDVLLMDEPCSALDPISTRQVEELCLELKE-QYTIIMVTHNMQ-QASRVADWTAFFNTEID 238 (274)
T ss_pred cCCHHHHHHHHHHHHHhhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhc-CCEEEEEeCCHH-HHHHhCCEEEEEecccc
Confidence 7999999999999999999999999999999999999999999999864 799999999986 5778899999997
Q ss_pred ----cCcEEEEeCCCC
Q 000997 1044 ----RGGELIYAGPLG 1055 (1194)
Q Consensus 1044 ----~gG~~~~~g~~~ 1055 (1194)
+.|++++.|+..
T Consensus 239 ~~~~~~G~~~~~g~~~ 254 (274)
T PRK14265 239 EYGKRRGKLVEFSPTE 254 (274)
T ss_pred cccccCceEEEeCCHH
Confidence 258999999863
No 422
>TIGR00630 uvra excinuclease ABC, A subunit. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Probab=100.00 E-value=1.6e-32 Score=345.84 Aligned_cols=123 Identities=23% Similarity=0.342 Sum_probs=97.9
Q ss_pred CCcHHHHHHHHhhhcCCCcCcHHHHHHHHHHHHHHcCCCcc-cCCcccCCCCCCCCHHHHHHHHHHHHHhh---CCCEEE
Q 000997 916 GLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSL-SGALIGLPGINGLSTEQRKRLTIAVELVA---NPSIVF 991 (1194)
Q Consensus 916 ~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~-~~~~~~~~~~~~LSgGqrqrl~ia~aL~~---~p~ill 991 (1194)
.+||.|.+.|...+. . .....++++.++|... .+.. ...|||||+||+.||++|+. +|++++
T Consensus 789 ~~tv~e~~~f~~~~~---~------i~~~l~~L~~~gL~~l~l~~~-----~~tLSgGe~QRl~LA~aL~~~~~~p~llI 854 (924)
T TIGR00630 789 DMTVEEAYEFFEAVP---S------ISRKLQTLCDVGLGYIKLGQP-----ATTLSGGEAQRIKLAKELSKRSTGRTLYI 854 (924)
T ss_pred CCcHHHHHHHHHhcc---c------hhHHHHHHHHcCCCchhhcCc-----cccCCHHHHHHHHHHHHHhhcCCCCCEEE
Confidence 456666666654321 0 1123567888888643 3332 35799999999999999997 599999
Q ss_pred EeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCeEEEEc-----cCcEEEEeCCC
Q 000997 992 MDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMK-----RGGELIYAGPL 1054 (1194)
Q Consensus 992 LDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~~d~~~~l~-----~gG~~~~~g~~ 1054 (1194)
|||||+|||+.....+++.|+++.+.|.|||+++|++. ..+.+|++++|. +||++++.|+.
T Consensus 855 LDEPtsgLD~~~~~~L~~~L~~l~~~G~TVIvi~H~~~--~i~~aD~ii~Lgp~~G~~gG~iv~~G~~ 920 (924)
T TIGR00630 855 LDEPTTGLHFDDIKKLLEVLQRLVDQGNTVVVIEHNLD--VIKTADYIIDLGPEGGDGGGTIVASGTP 920 (924)
T ss_pred EECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHH--HHHhCCEEEEecCCccCCCCEEEEeCCH
Confidence 99999999999999999999999888999999999975 346799999993 47999999975
No 423
>cd03299 ABC_ModC_like Archeal protein closely related to ModC. ModC is an ABC-type transporter and the ATPase component of a molybdate transport system that also includes the periplasmic binding protein ModA and the membrane protein ModB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=7.2e-34 Score=312.87 Aligned_cols=204 Identities=27% Similarity=0.399 Sum_probs=171.6
Q ss_pred eeecceEeEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCceeeEEEECCccCCCCC-CCceEEEEecCCCCCCCCCHHH
Q 000997 150 ILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV-PPRTSAYVSQQDWQVAEMTVRE 228 (1194)
Q Consensus 150 iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~~-~~~~~~yv~Q~d~~~~~lTV~E 228 (1194)
+|+|+|++|+|||+++|+||||||||||+++|+|.+++. +|+|.++|.++.... .++.++|++|++.+++.+||.|
T Consensus 14 ~l~~is~~i~~Ge~~~i~G~nG~GKStLl~~l~G~~~p~---~G~v~i~g~~~~~~~~~~~~i~~~~q~~~~~~~~t~~e 90 (235)
T cd03299 14 KLKNVSLEVERGDYFVILGPTGSGKSVLLETIAGFIKPD---SGKILLNGKDITNLPPEKRDISYVPQNYALFPHMTVYK 90 (235)
T ss_pred eeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCC---ceEEEECCEEcCcCChhHcCEEEEeecCccCCCccHHH
Confidence 799999999999999999999999999999999998876 899999998876532 2467999999999899999999
Q ss_pred HHHHhhhccCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhccCcchhHHHHHHHHHhCCcccccccccCccCCCCC
Q 000997 229 TLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEMLKGIS 308 (1194)
Q Consensus 229 ~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~k~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~LS 308 (1194)
|+.++....+.. . . +....+.++++.+||.+..++.+ +.||
T Consensus 91 ~l~~~~~~~~~~--~------------------~--------------~~~~~~~~~l~~~~l~~~~~~~~-----~~LS 131 (235)
T cd03299 91 NIAYGLKKRKVD--K------------------K--------------EIERKVLEIAEMLGIDHLLNRKP-----ETLS 131 (235)
T ss_pred HHHHHHHHcCCC--H------------------H--------------HHHHHHHHHHHHcCChhHHhcCc-----ccCC
Confidence 998754321100 0 0 01123567888999987777665 4699
Q ss_pred hhhhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEcCCeEEE
Q 000997 309 GGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEGQIVY 388 (1194)
Q Consensus 309 GGqkqRvsia~al~~~~~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~~G~iv~ 388 (1194)
|||||||+||+|++.+|++++|||||+|||+.++..+.+.|++++...+ ++++.++|..+++.+++|++++|++|++++
T Consensus 132 ~G~~qrl~laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~~~~~~~-~tili~tH~~~~~~~~~d~i~~l~~G~i~~ 210 (235)
T cd03299 132 GGEQQRVAIARALVVNPKILLLDEPFSALDVRTKEKLREELKKIRKEFG-VTVLHVTHDFEEAWALADKVAIMLNGKLIQ 210 (235)
T ss_pred HHHHHHHHHHHHHHcCCCEEEECCCcccCCHHHHHHHHHHHHHHHHhcC-CEEEEEecCHHHHHHhCCEEEEEECCEEEE
Confidence 9999999999999999999999999999999999999999999865334 456667788889999999999999999999
Q ss_pred ecChhhHH
Q 000997 389 QGPRVSVL 396 (1194)
Q Consensus 389 ~G~~~~~~ 396 (1194)
.|+.+++.
T Consensus 211 ~~~~~~~~ 218 (235)
T cd03299 211 VGKPEEVF 218 (235)
T ss_pred ecCHHHHH
Confidence 99987664
No 424
>PRK10247 putative ABC transporter ATP-binding protein YbbL; Provisional
Probab=100.00 E-value=3.4e-34 Score=313.27 Aligned_cols=197 Identities=22% Similarity=0.338 Sum_probs=160.4
Q ss_pred ceEEeeeeeEEEeCCcEEEEEccCCCChHHHHhhhcCCCCCCeeEEEEEEcCccCCh---hcccceeeEeecCCCCCCCC
Q 000997 841 RLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ---ETFARISGYCEQNDIHSPGL 917 (1194)
Q Consensus 841 ~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~---~~~~~~~gyv~Q~~~~~~~l 917 (1194)
++.+|+|+||++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++.. ..+++.++|++|++.+++ .
T Consensus 19 ~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~l~~-~ 95 (225)
T PRK10247 19 DAKILNNISFSLRAGEFKLITGPSGCGKSTLLKIVASLIS--PTSGTLLFEGEDISTLKPEIYRQQVSYCAQTPTLFG-D 95 (225)
T ss_pred CceeeeccEEEEcCCCEEEEECCCCCCHHHHHHHHhcccC--CCCCeEEECCEEcCcCCHHHHHhccEEEeccccccc-c
Confidence 4579999999999999999999999999999999999865 468999999986532 234567899999988876 4
Q ss_pred cHHHHHHHHhhhcCCCcCcHHHHHHHHHHHHHHcCCC-cccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCC
Q 000997 918 TVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELT-SLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPT 996 (1194)
Q Consensus 918 Tv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~-~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEPT 996 (1194)
|++||+.+....+.. . ...+.++++++.+++. ...+.. +..||+|||||++||++|+.+|++|+|||||
T Consensus 96 tv~enl~~~~~~~~~---~--~~~~~~~~~l~~~~l~~~~~~~~-----~~~LS~G~~qrv~laral~~~p~llllDEPt 165 (225)
T PRK10247 96 TVYDNLIFPWQIRNQ---Q--PDPAIFLDDLERFALPDTILTKN-----IAELSGGEKQRISLIRNLQFMPKVLLLDEIT 165 (225)
T ss_pred cHHHHHHhHHhhcCC---C--hHHHHHHHHHHHcCCChHHhcCC-----cccCCHHHHHHHHHHHHHhcCCCEEEEeCCc
Confidence 999999875433211 1 1124567889999985 344443 3589999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCCcHHHHHhcCeEEEEccCcEEEEeC
Q 000997 997 SGLDARAAAIVMRTVRNIVN-TGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAG 1052 (1194)
Q Consensus 997 sgLD~~~~~~i~~~l~~l~~-~g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g 1052 (1194)
+|||+.+...+.+.|+++.+ .|.|||+++|+++. + +.+|++++|.+.+..+.+|
T Consensus 166 ~~LD~~~~~~l~~~l~~~~~~~~~tvii~sh~~~~-~-~~~d~i~~l~~~~~~~~~~ 220 (225)
T PRK10247 166 SALDESNKHNVNEIIHRYVREQNIAVLWVTHDKDE-I-NHADKVITLQPHAGEMQEA 220 (225)
T ss_pred ccCCHHHHHHHHHHHHHHHHhcCCEEEEEECChHH-H-HhCCEEEEEecccchHhhh
Confidence 99999999999999999876 48999999999863 4 5699999996444334333
No 425
>PRK09984 phosphonate/organophosphate ester transporter subunit; Provisional
Probab=100.00 E-value=4.1e-34 Score=320.19 Aligned_cols=216 Identities=22% Similarity=0.302 Sum_probs=173.1
Q ss_pred eeeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCceeeEEEECCccCCCCC--------CCceEEEEecCCC
Q 000997 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV--------PPRTSAYVSQQDW 219 (1194)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~~--------~~~~~~yv~Q~d~ 219 (1194)
.++|+|+|+++++||+++|+||||||||||+++|+|.++|+...+|+|.++|.++.... .++.++|++|++.
T Consensus 17 ~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~p~~~~~G~i~~~g~~~~~~~~~~~~~~~~~~~i~~~~q~~~ 96 (262)
T PRK09984 17 HQALHAVDLNIHHGEMVALLGPSGSGKSTLLRHLSGLITGDKSAGSHIELLGRTVQREGRLARDIRKSRANTGYIFQQFN 96 (262)
T ss_pred eEEEecceEEEcCCcEEEEECCCCCCHHHHHHHHhccCCCCCCCceEEEECCEecccccccchhHHHHHhheEEEccccc
Confidence 36999999999999999999999999999999999998775334699999998764321 1356899999998
Q ss_pred CCCCCCHHHHHHHhhhccCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhccCcchhHHHHHHHHHhCCcccccccc
Q 000997 220 QVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLV 299 (1194)
Q Consensus 220 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~k~~~~~~~~~~~~~~~~l~~lgL~~~~dt~v 299 (1194)
+++.+||.||+.+...... . . ... ..+.. ..+.+..++.+++.+||++..|..+
T Consensus 97 ~~~~~tv~e~l~~~~~~~~--~-~------~~~--~~~~~---------------~~~~~~~~~~~l~~~~l~~~~~~~~ 150 (262)
T PRK09984 97 LVNRLSVLENVLIGALGST--P-F------WRT--CFSWF---------------TREQKQRALQALTRVGMVHFAHQRV 150 (262)
T ss_pred cccCCcHHHHHHhhhcccc--c-c------hhh--hcccc---------------cHHHHHHHHHHHHHcCCHHHHhCCc
Confidence 8999999999987532100 0 0 000 00000 0011234788999999987777655
Q ss_pred cCccCCCCChhhhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEE
Q 000997 300 GDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVI 379 (1194)
Q Consensus 300 g~~~~~~LSGGqkqRvsia~al~~~~~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vi 379 (1194)
+ .|||||||||+||+||+.+|++|+|||||+|||..++..+.+.|+++++.. +++|+.++|+.+++..++|+|+
T Consensus 151 ~-----~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~-g~tvii~tH~~~~~~~~~d~i~ 224 (262)
T PRK09984 151 S-----TLSGGQQQRVAIARALMQQAKVILADEPIASLDPESARIVMDTLRDINQND-GITVVVTLHQVDYALRYCERIV 224 (262)
T ss_pred c-----ccCHHHHHHHHHHHHHhcCCCEEEecCccccCCHHHHHHHHHHHHHHHHhc-CCEEEEEeCCHHHHHHhCCEEE
Confidence 4 599999999999999999999999999999999999999999999987543 4566668888899999999999
Q ss_pred EEcCCeEEEecChhhH
Q 000997 380 LLSEGQIVYQGPRVSV 395 (1194)
Q Consensus 380 lL~~G~iv~~G~~~~~ 395 (1194)
+|++|++++.|+++++
T Consensus 225 ~l~~g~i~~~g~~~~~ 240 (262)
T PRK09984 225 ALRQGHVFYDGSSQQF 240 (262)
T ss_pred EEECCEEEEeCCHHHh
Confidence 9999999999987664
No 426
>PRK14267 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.2e-34 Score=316.78 Aligned_cols=212 Identities=22% Similarity=0.311 Sum_probs=168.5
Q ss_pred eeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCC--CceeeEEEECCccCCC--C---CCCceEEEEecCCCCC
Q 000997 149 TILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHH--LQVSGKITYNGHGFKE--F---VPPRTSAYVSQQDWQV 221 (1194)
Q Consensus 149 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~--~~~~G~i~~~G~~~~~--~---~~~~~~~yv~Q~d~~~ 221 (1194)
++|+|+|+++++||+++|+||||||||||+++|+|.+++. .+.+|+|+++|.++.. . ..++.++|++|++.++
T Consensus 18 ~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~i~~~~q~~~~~ 97 (253)
T PRK14267 18 HVIKGVDLKIPQNGVFALMGPSGCGKSTLLRTFNRLLELNEEARVEGEVRLFGRNIYSPDVDPIEVRREVGMVFQYPNPF 97 (253)
T ss_pred eeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCcccCCCCceEEEECCEEccccccChHHHhhceeEEecCCccC
Confidence 5999999999999999999999999999999999998762 1348999999988742 1 1245799999999989
Q ss_pred CCCCHHHHHHHhhhccCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhccCcchhHHHHHHHHHhCCcccccccccC
Q 000997 222 AEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGD 301 (1194)
Q Consensus 222 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~k~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 301 (1194)
+.+||.||+.++....+.....+ .....++++++.+||........ +
T Consensus 98 ~~~tv~enl~~~~~~~~~~~~~~--------------------------------~~~~~~~~~l~~~~l~~~~~~~~-~ 144 (253)
T PRK14267 98 PHLTIYDNVAIGVKLNGLVKSKK--------------------------------ELDERVEWALKKAALWDEVKDRL-N 144 (253)
T ss_pred CCCcHHHHHHHHHHhcCccCCHH--------------------------------HHHHHHHHHHHHcCCccchhhhh-c
Confidence 99999999987643221100000 00123567788888743111111 2
Q ss_pred ccCCCCChhhhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEE
Q 000997 302 EMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILL 381 (1194)
Q Consensus 302 ~~~~~LSGGqkqRvsia~al~~~~~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL 381 (1194)
.....|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++++ + .+|+.++|..+++..++|+|++|
T Consensus 145 ~~~~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~--~-~tiii~sH~~~~~~~~~d~i~~l 221 (253)
T PRK14267 145 DYPSNLSGGQRQRLVIARALAMKPKILLMDEPTANIDPVGTAKIEELLFELKK--E-YTIVLVTHSPAQAARVSDYVAFL 221 (253)
T ss_pred cChhhCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhh--C-CEEEEEECCHHHHHhhCCEEEEE
Confidence 33457999999999999999999999999999999999999999999999854 3 55666888889999999999999
Q ss_pred cCCeEEEecChhhHH
Q 000997 382 SEGQIVYQGPRVSVL 396 (1194)
Q Consensus 382 ~~G~iv~~G~~~~~~ 396 (1194)
++|++++.|+.+++.
T Consensus 222 ~~G~i~~~~~~~~~~ 236 (253)
T PRK14267 222 YLGKLIEVGPTRKVF 236 (253)
T ss_pred ECCEEEEeCCHHHHH
Confidence 999999999987763
No 427
>TIGR03796 NHPM_micro_ABC1 NHPM bacteriocin system ABC transporter, peptidase/ATP-binding protein. This protein describes an multidomain ABC transporter subunit that is one of three protein families associated with some regularity with a distinctive family of putative bacteriocins. It includes a bacteriocin-processing peptidase domain at the N-terminus. Model TIGR03793 describes a conserved propeptide region for this bacteriocin family, unusual because it shows obvious homology a region of the enzyme nitrile hydratase up to the classic Gly-Gly cleavage motif. This family is therefore predicted to be a subunit of a bacteriocin processing and export system characteristic to this system that we designate NHPM, Nitrile Hydratase Propeptide Microcin.
Probab=100.00 E-value=2.6e-34 Score=365.88 Aligned_cols=206 Identities=23% Similarity=0.334 Sum_probs=164.7
Q ss_pred eeeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCceeeEEEECCccCCCCC---CCceEEEEecCCCCCCCC
Q 000997 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV---PPRTSAYVSQQDWQVAEM 224 (1194)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~~---~~~~~~yv~Q~d~~~~~l 224 (1194)
+++|+|+|++|+|||.++|+||||||||||+++|+|.++|. +|+|.+||.++++.. .++.++||+|++++|. .
T Consensus 492 ~~vL~~isl~i~~Ge~vaIvG~sGsGKSTLlklL~gl~~p~---~G~I~idg~~i~~~~~~~lr~~i~~v~Q~~~lf~-g 567 (710)
T TIGR03796 492 PPLIENFSLTLQPGQRVALVGGSGSGKSTIAKLVAGLYQPW---SGEILFDGIPREEIPREVLANSVAMVDQDIFLFE-G 567 (710)
T ss_pred CCcccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CcEEEECCEeHHHCCHHHHHhheeEEecCChhhh-c
Confidence 36999999999999999999999999999999999999886 999999999987664 3688999999998775 5
Q ss_pred CHHHHHHHhhhccCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhccCcchhHHHHHHHHHhCCcccccccccCccC
Q 000997 225 TVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEML 304 (1194)
Q Consensus 225 TV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~k~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~ 304 (1194)
|++|||.++.. ....+.+.++++ .+. .++.+ -.|+...||.+|+.+
T Consensus 568 Ti~eNi~l~~~----~~~~~~i~~al~------------------~~~---------l~~~i--~~lp~gl~t~i~e~G- 613 (710)
T TIGR03796 568 TVRDNLTLWDP----TIPDADLVRACK------------------DAA---------IHDVI--TSRPGGYDAELAEGG- 613 (710)
T ss_pred cHHHHhhCCCC----CCCHHHHHHHHH------------------HhC---------CHHHH--HhCcCcccceeccCC-
Confidence 99999987421 111111111111 000 11111 236778899999754
Q ss_pred CCCChhhhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEcCC
Q 000997 305 KGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEG 384 (1194)
Q Consensus 305 ~~LSGGqkqRvsia~al~~~~~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~~G 384 (1194)
.+||||||||++||||++.+|++|+||||||+||+.++..|.+.|++ .++|+|+ ++|..+ ....+|+|++|++|
T Consensus 614 ~~LSGGQrQRiaLARall~~p~iliLDEptS~LD~~te~~i~~~l~~----~~~T~Ii-itHrl~-~i~~~D~Iivl~~G 687 (710)
T TIGR03796 614 ANLSGGQRQRLEIARALVRNPSILILDEATSALDPETEKIIDDNLRR----RGCTCII-VAHRLS-TIRDCDEIIVLERG 687 (710)
T ss_pred CCCCHHHHHHHHHHHHHhhCCCEEEEECccccCCHHHHHHHHHHHHh----cCCEEEE-EecCHH-HHHhCCEEEEEeCC
Confidence 68999999999999999999999999999999999999999999985 2455555 556554 45669999999999
Q ss_pred eEEEecChhhHHH
Q 000997 385 QIVYQGPRVSVLD 397 (1194)
Q Consensus 385 ~iv~~G~~~~~~~ 397 (1194)
+++..|+++++++
T Consensus 688 ~i~~~G~~~~Ll~ 700 (710)
T TIGR03796 688 KVVQRGTHEELWA 700 (710)
T ss_pred EEEEecCHHHHHH
Confidence 9999999999864
No 428
>PRK14243 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=9e-34 Score=317.38 Aligned_cols=206 Identities=21% Similarity=0.238 Sum_probs=163.7
Q ss_pred ceEEeeeeeEEEeCCcEEEEEccCCCChHHHHhhhcCCCCCC---eeEEEEEEcCccCC-----hhcccceeeEeecCCC
Q 000997 841 RLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGG---IIEGDIYISGYPKR-----QETFARISGYCEQNDI 912 (1194)
Q Consensus 841 ~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~---~~~G~i~i~g~~~~-----~~~~~~~~gyv~Q~~~ 912 (1194)
++.+|+|+|++|++||++||+|+||||||||+++|+|..... +.+|+|.++|.++. ...+++.+||++|++.
T Consensus 22 ~~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~i~~v~q~~~ 101 (264)
T PRK14243 22 SFLAVKNVWLDIPKNQITAFIGPSGCGKSTILRCFNRLNDLIPGFRVEGKVTFHGKNLYAPDVDPVEVRRRIGMVFQKPN 101 (264)
T ss_pred CEEEeecceEEEcCCCEEEEECCCCCCHHHHHHHHHhhhcccCCCCCceEEEECCEEccccccChHHHhhhEEEEccCCc
Confidence 357999999999999999999999999999999999974311 25899999998753 1234567999999988
Q ss_pred CCCCCcHHHHHHHHhhhcCCCcCcHHHHHHHHHHHHHHcCCCcccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEE
Q 000997 913 HSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFM 992 (1194)
Q Consensus 913 ~~~~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illL 992 (1194)
+++ .|+.||+.+....+. .. ....+.++++++.+++.+..+.... ..+..||||||||++|||||+.+|+||+|
T Consensus 102 ~~~-~tv~enl~~~~~~~~---~~-~~~~~~~~~~l~~~~l~~~l~~~~~-~~~~~LSgGq~qrv~laral~~~p~lllL 175 (264)
T PRK14243 102 PFP-KSIYDNIAYGARING---YK-GDMDELVERSLRQAALWDEVKDKLK-QSGLSLSGGQQQRLCIARAIAVQPEVILM 175 (264)
T ss_pred ccc-ccHHHHHHhhhhhcC---cc-hHHHHHHHHHHHHhCchhhHHHHhc-CCcccCCHHHHHHHHHHHHHhcCCCEEEE
Confidence 877 499999988653321 11 1223446667777777431111111 12457999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCeEEEEcc--------CcEEEEeCCC
Q 000997 993 DEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKR--------GGELIYAGPL 1054 (1194)
Q Consensus 993 DEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~--------gG~~~~~g~~ 1054 (1194)
||||+|||+.++..+++.|+++++ ++|||+++|+++ ++.+.||++++|++ .|+++..|+.
T Consensus 176 DEPt~~LD~~~~~~l~~~L~~~~~-~~tvi~vtH~~~-~~~~~~d~v~~l~~~~~~~~~~~g~i~~~~~~ 243 (264)
T PRK14243 176 DEPCSALDPISTLRIEELMHELKE-QYTIIIVTHNMQ-QAARVSDMTAFFNVELTEGGGRYGYLVEFDRT 243 (264)
T ss_pred eCCCccCCHHHHHHHHHHHHHHhc-CCEEEEEecCHH-HHHHhCCEEEEEecccccccccCceEEEeCCH
Confidence 999999999999999999999875 589999999986 57888999999972 4799998875
No 429
>TIGR00958 3a01208 Conjugate Transporter-2 (CT2) Family protein.
Probab=100.00 E-value=6e-34 Score=360.62 Aligned_cols=206 Identities=24% Similarity=0.372 Sum_probs=161.7
Q ss_pred eeeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCceeeEEEECCccCCCCCC---CceEEEEecCCCCCCCC
Q 000997 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVP---PRTSAYVSQQDWQVAEM 224 (1194)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~l 224 (1194)
+++|+|+|++|+|||.++|+||||||||||+++|+|.++|. +|+|.+||.++++... ++.++||+|++.+|. .
T Consensus 494 ~~vL~~isl~i~~Ge~vaIvG~SGsGKSTLl~lL~gl~~p~---~G~I~idg~~i~~~~~~~lr~~i~~v~Q~~~lF~-g 569 (711)
T TIGR00958 494 VPVLKGLTFTLHPGEVVALVGPSGSGKSTVAALLQNLYQPT---GGQVLLDGVPLVQYDHHYLHRQVALVGQEPVLFS-G 569 (711)
T ss_pred CccccCceEEEcCCCEEEEECCCCCCHHHHHHHHHhccCCC---CCEEEECCEEHHhcCHHHHHhhceEEecCccccc-c
Confidence 46999999999999999999999999999999999999886 9999999999877653 578999999998775 6
Q ss_pred CHHHHHHHhhhccCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhccCcchhHHHHHHHHHhCCcccccccccCccC
Q 000997 225 TVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEML 304 (1194)
Q Consensus 225 TV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~k~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~ 304 (1194)
|++|||.++... ...+.+.+++ +.+. .++.++ .|++..||.+|+. .
T Consensus 570 TIreNI~~g~~~----~~~e~i~~al------------------~~a~---------l~~~i~--~lp~GldT~ige~-G 615 (711)
T TIGR00958 570 SVRENIAYGLTD----TPDEEIMAAA------------------KAAN---------AHDFIM--EFPNGYDTEVGEK-G 615 (711)
T ss_pred CHHHHHhcCCCC----CCHHHHHHHH------------------HHcC---------CHHHHH--hCCCccCCcccCC-C
Confidence 999999885321 0011111111 0000 111111 3567789999975 4
Q ss_pred CCCChhhhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEcCC
Q 000997 305 KGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEG 384 (1194)
Q Consensus 305 ~~LSGGqkqRvsia~al~~~~~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~~G 384 (1194)
.+||||||||++||||++++|+|++||||||+||+.+...+.+ ... ..++ |++.++|..+ ..+.+|+|++|++|
T Consensus 616 ~~LSGGQkQRlalARALl~~p~ILILDEpTSaLD~~te~~i~~-~~~---~~~~-TvIiItHrl~-~i~~aD~IivL~~G 689 (711)
T TIGR00958 616 SQLSGGQKQRIAIARALVRKPRVLILDEATSALDAECEQLLQE-SRS---RASR-TVLLIAHRLS-TVERADQILVLKKG 689 (711)
T ss_pred CcCCHHHHHHHHHHHHHhcCCCEEEEEccccccCHHHHHHHHH-hhc---cCCC-eEEEEeccHH-HHHhCCEEEEEECC
Confidence 5799999999999999999999999999999999999999888 221 2234 4555666654 45779999999999
Q ss_pred eEEEecChhhHHH
Q 000997 385 QIVYQGPRVSVLD 397 (1194)
Q Consensus 385 ~iv~~G~~~~~~~ 397 (1194)
+++.+|+++++.+
T Consensus 690 ~ive~Gt~~eL~~ 702 (711)
T TIGR00958 690 SVVEMGTHKQLME 702 (711)
T ss_pred EEEEeeCHHHHHh
Confidence 9999999998864
No 430
>PRK14274 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.5e-33 Score=315.03 Aligned_cols=210 Identities=20% Similarity=0.310 Sum_probs=166.0
Q ss_pred eeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHhcCcCC--CCceeeEEEECCccCCCC-----CCCceEEEEecCCCCC
Q 000997 149 TILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGH--HLQVSGKITYNGHGFKEF-----VPPRTSAYVSQQDWQV 221 (1194)
Q Consensus 149 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~--~~~~~G~i~~~G~~~~~~-----~~~~~~~yv~Q~d~~~ 221 (1194)
++|+|+|++|++||+++|+|||||||||||++|+|.+.+ ..+.+|+|+++|.++... ..++.++|++|++.++
T Consensus 26 ~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~p~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~v~q~~~~~ 105 (259)
T PRK14274 26 HALKNINLSIPENEVTAIIGPSGCGKSTFIKTLNLMIQMVPNVKLTGEMNYNGSNILKGKVDLVELRKNIGMVFQKGNPF 105 (259)
T ss_pred eeEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhccCCCCCCCceEEEECCEEccccccCHHHHhhceEEEecCCccc
Confidence 599999999999999999999999999999999999863 223489999999886431 1245799999998888
Q ss_pred CCCCHHHHHHHhhhccCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhccCcchhHHHHHHHHHhCCcccccccccC
Q 000997 222 AEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGD 301 (1194)
Q Consensus 222 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~k~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 301 (1194)
+. ||+||+.|.....+.... .+....++.+++.+||.+...... +
T Consensus 106 ~~-tv~enl~~~~~~~~~~~~---------------------------------~~~~~~~~~~l~~~~l~~~~~~~l-~ 150 (259)
T PRK14274 106 PQ-SIFDNVAYGPRIHGTKNK---------------------------------KKLQEIVEKSLKDVALWDEVKDRL-H 150 (259)
T ss_pred cc-CHHHHHHhHHHhcCCCCH---------------------------------HHHHHHHHHHHHHcCCchhhhhhh-h
Confidence 75 999999876432211000 001123566788888853211111 2
Q ss_pred ccCCCCChhhhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEE
Q 000997 302 EMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILL 381 (1194)
Q Consensus 302 ~~~~~LSGGqkqRvsia~al~~~~~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL 381 (1194)
...+.|||||||||+||++|+.+|++++|||||+|||+.++..+.+.|+++.. + .+++.++|+.+++.+++|++++|
T Consensus 151 ~~~~~LS~Gq~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~--~-~tiiivtH~~~~~~~~~d~i~~l 227 (259)
T PRK14274 151 TQALSLSGGQQQRLCIARALATNPDVLLMDEPTSALDPVSTRKIEELILKLKE--K-YTIVIVTHNMQQAARVSDQTAFF 227 (259)
T ss_pred CCcccCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhc--C-CEEEEEEcCHHHHHHhCCEEEEE
Confidence 23457999999999999999999999999999999999999999999999853 3 45666788888999999999999
Q ss_pred cCCeEEEecChhhHH
Q 000997 382 SEGQIVYQGPRVSVL 396 (1194)
Q Consensus 382 ~~G~iv~~G~~~~~~ 396 (1194)
++|+++.+|+++++.
T Consensus 228 ~~G~i~~~g~~~~~~ 242 (259)
T PRK14274 228 YMGELVECNDTNKMF 242 (259)
T ss_pred ECCEEEEECCHHHHh
Confidence 999999999988763
No 431
>PRK11174 cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed
Probab=100.00 E-value=2.6e-34 Score=358.65 Aligned_cols=210 Identities=26% Similarity=0.401 Sum_probs=173.6
Q ss_pred ceeEeecceeeeecccccccccccccceEEeeeeeEEEeCCcEEEEEccCCCChHHHHhhhcCCCCCCeeEEEEEEcCcc
Q 000997 815 LSMAFGNINYFVDVPVELKQEGVLEDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYP 894 (1194)
Q Consensus 815 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~ 894 (1194)
..+.++|+++... +++++|+|+|++++||+++||+||||||||||+++|+|.. + .+|+|.+||.+
T Consensus 348 ~~i~~~~vsf~~~------------~~~~vL~~i~l~i~~G~~vaIvG~SGsGKSTL~~lL~g~~-p--~~G~I~i~g~~ 412 (588)
T PRK11174 348 VTIEAEDLEILSP------------DGKTLAGPLNFTLPAGQRIALVGPSGAGKTSLLNALLGFL-P--YQGSLKINGIE 412 (588)
T ss_pred ceEEEEeeEEecc------------CCCeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCC-C--CCcEEEECCEe
Confidence 3588888875431 2356999999999999999999999999999999999987 3 48999999987
Q ss_pred CC---hhcccceeeEeecCCCCCCCCcHHHHHHHHhhhcCCCcCcHHHHHHHHHHHHHHcCCCc-------ccCCcccCC
Q 000997 895 KR---QETFARISGYCEQNDIHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTS-------LSGALIGLP 964 (1194)
Q Consensus 895 ~~---~~~~~~~~gyv~Q~~~~~~~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~-------~~~~~~~~~ 964 (1194)
+. ...+++.++||+|++.++.+ |++||+.++. | +.+. +.++++++..++.+ -.|+.+|..
T Consensus 413 i~~~~~~~lr~~i~~v~Q~~~LF~~-TI~eNI~~g~----~-~~~~----eei~~al~~a~l~~~i~~lp~G~dT~vge~ 482 (588)
T PRK11174 413 LRELDPESWRKHLSWVGQNPQLPHG-TLRDNVLLGN----P-DASD----EQLQQALENAWVSEFLPLLPQGLDTPIGDQ 482 (588)
T ss_pred cccCCHHHHHhheEEecCCCcCCCc-CHHHHhhcCC----C-CCCH----HHHHHHHHHhCHHHHHHhcccccccccccC
Confidence 64 35678899999999998875 9999998752 1 2222 34566666666543 235566654
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCeEEEEcc
Q 000997 965 GINGLSTEQRKRLTIAVELVANPSIVFMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKR 1044 (1194)
Q Consensus 965 ~~~~LSgGqrqrl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~ 1044 (1194)
+ ..||||||||++|||||+++|+||+||||||+||+.++..|++.|+++. +++|+|+++|+++ ....+|++++|+
T Consensus 483 G-~~LSGGQrQRialARAll~~~~IliLDE~TSaLD~~te~~i~~~l~~~~-~~~TvIiItHrl~--~i~~aD~Iivl~- 557 (588)
T PRK11174 483 A-AGLSVGQAQRLALARALLQPCQLLLLDEPTASLDAHSEQLVMQALNAAS-RRQTTLMVTHQLE--DLAQWDQIWVMQ- 557 (588)
T ss_pred C-CCCCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHHh-CCCEEEEEecChH--HHHhCCEEEEEe-
Confidence 3 5799999999999999999999999999999999999999999999875 5899999999975 567899999998
Q ss_pred CcEEEEeCCC
Q 000997 1045 GGELIYAGPL 1054 (1194)
Q Consensus 1045 gG~~~~~g~~ 1054 (1194)
+|+++..|+.
T Consensus 558 ~G~i~e~G~~ 567 (588)
T PRK11174 558 DGQIVQQGDY 567 (588)
T ss_pred CCeEeecCCH
Confidence 5899998874
No 432
>PRK14245 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.5e-33 Score=313.63 Aligned_cols=211 Identities=20% Similarity=0.263 Sum_probs=167.0
Q ss_pred eeeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHhcCcC--CCCceeeEEEECCccCCCCC-----CCceEEEEecCCCC
Q 000997 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLG--HHLQVSGKITYNGHGFKEFV-----PPRTSAYVSQQDWQ 220 (1194)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~--~~~~~~G~i~~~G~~~~~~~-----~~~~~~yv~Q~d~~ 220 (1194)
+++|+|+|+++++|++++|+||||||||||+++|+|..+ +..+.+|+|.++|.++.... .++.++|++|++.+
T Consensus 16 ~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~v~q~~~~ 95 (250)
T PRK14245 16 FHALKGISMEIEEKSVVAFIGPSGCGKSTFLRLFNRMNDLIPATRLEGEIRIDGRNIYDKGVQVDELRKNVGMVFQRPNP 95 (250)
T ss_pred EeEEeeeeEEEeCCCEEEEECCCCCCHHHHHHHHhhhhcccCCCCCceEEEECCEecccccccHHHHhhheEEEecCCcc
Confidence 359999999999999999999999999999999999732 21124899999998875421 24579999999887
Q ss_pred CCCCCHHHHHHHhhhccCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhccCcchhHHHHHHHHHhCCccccccccc
Q 000997 221 VAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVG 300 (1194)
Q Consensus 221 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~k~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg 300 (1194)
++ .||.||+.++.+..+.... + .....++++++.+||.+...+..
T Consensus 96 ~~-~tv~~nl~~~~~~~~~~~~-~--------------------------------~~~~~~~~~l~~~~l~~~~~~~~- 140 (250)
T PRK14245 96 FP-KSIFENVAYGLRVNGVKDN-A--------------------------------FIRQRVEETLKGAALWDEVKDKL- 140 (250)
T ss_pred Cc-ccHHHHHHHHHHHcCCCcH-H--------------------------------HHHHHHHHHHHHcCCCcchhhhh-
Confidence 76 6999999876432211000 0 01123677888899865322222
Q ss_pred CccCCCCChhhhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEE
Q 000997 301 DEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVIL 380 (1194)
Q Consensus 301 ~~~~~~LSGGqkqRvsia~al~~~~~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vil 380 (1194)
+.....|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++.+ + ++|+.++|+..++.+++|+|++
T Consensus 141 ~~~~~~LS~G~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~--~-~tiiivtH~~~~~~~~~d~v~~ 217 (250)
T PRK14245 141 KESAFALSGGQQQRLCIARAMAVSPSVLLMDEPASALDPISTAKVEELIHELKK--D-YTIVIVTHNMQQAARVSDKTAF 217 (250)
T ss_pred hCCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhc--C-CeEEEEeCCHHHHHhhCCEEEE
Confidence 133457999999999999999999999999999999999999999999999843 3 4566688888999999999999
Q ss_pred EcCCeEEEecChhhHH
Q 000997 381 LSEGQIVYQGPRVSVL 396 (1194)
Q Consensus 381 L~~G~iv~~G~~~~~~ 396 (1194)
|++|++++.|+.+++.
T Consensus 218 l~~G~~~~~~~~~~~~ 233 (250)
T PRK14245 218 FYMGEMVEYDDTKKIF 233 (250)
T ss_pred EECCEEEEECCHHHHh
Confidence 9999999999988774
No 433
>PRK14270 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2e-33 Score=312.68 Aligned_cols=207 Identities=20% Similarity=0.313 Sum_probs=167.1
Q ss_pred eeeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCC--CceeeEEEECCccCCCCC-----CCceEEEEecCCCC
Q 000997 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHH--LQVSGKITYNGHGFKEFV-----PPRTSAYVSQQDWQ 220 (1194)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~--~~~~G~i~~~G~~~~~~~-----~~~~~~yv~Q~d~~ 220 (1194)
+.+|+|+|++|++||+++|+|||||||||||++|+|.+++. .+.+|+|.++|.++.... .++.++|++|++.+
T Consensus 17 ~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~i~~~~q~~~~ 96 (251)
T PRK14270 17 KQALNDINLPIYENKITALIGPSGCGKSTFLRCLNRMNDLISNVKIEGEVLLDGKNIYDKDVDVVELRKRVGMVFQKPNP 96 (251)
T ss_pred eeeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHHhccCcccCCCCccEEEECCEecccccccHHHHHhheEEEecCCCc
Confidence 35999999999999999999999999999999999987642 125899999998875321 24569999999987
Q ss_pred CCCCCHHHHHHHhhhccCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhccCcchhHHHHHHHHHhCCcc----ccc
Q 000997 221 VAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDT----CAD 296 (1194)
Q Consensus 221 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~k~~~~~~~~~~~~~~~~l~~lgL~~----~~d 296 (1194)
++ +||+||+.|.....+.... ......++.+++.+||.. ..+
T Consensus 97 ~~-~tv~enl~~~~~~~~~~~~---------------------------------~~~~~~~~~~l~~~~l~~~~~~~~~ 142 (251)
T PRK14270 97 FP-MSIYDNVAYGPRIHGIKDK---------------------------------KELDKIVEWALKKAALWDEVKDDLK 142 (251)
T ss_pred CC-CcHHHHHHhHHHhcCCCcH---------------------------------HHHHHHHHHHHHHcCCchhhhhHhh
Confidence 87 8999999886433211000 001123566788888742 233
Q ss_pred ccccCccCCCCChhhhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcC
Q 000997 297 TLVGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFD 376 (1194)
Q Consensus 297 t~vg~~~~~~LSGGqkqRvsia~al~~~~~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D 376 (1194)
. ..+.|||||||||+||+|++.+|++++|||||+|||+.++.++.+.|+++.+ + ++|+.++|+..++.+++|
T Consensus 143 ~-----~~~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~L~~~~~--~-~tiiivsH~~~~~~~~~d 214 (251)
T PRK14270 143 K-----SALKLSGGQQQRLCIARTIAVKPDVILMDEPTSALDPISTLKIEDLMVELKK--E-YTIVIVTHNMQQASRVSD 214 (251)
T ss_pred C-----CcccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHh--C-CeEEEEEcCHHHHHHhcC
Confidence 3 3457999999999999999999999999999999999999999999998864 3 456667788889999999
Q ss_pred eEEEEcCCeEEEecChhhHH
Q 000997 377 DVILLSEGQIVYQGPRVSVL 396 (1194)
Q Consensus 377 ~vilL~~G~iv~~G~~~~~~ 396 (1194)
+|++|++|++++.|+.+++.
T Consensus 215 ~v~~l~~G~i~~~~~~~~~~ 234 (251)
T PRK14270 215 YTAFFLMGDLIEFNKTEKIF 234 (251)
T ss_pred EEEEEECCeEEEeCCHHHHh
Confidence 99999999999999988763
No 434
>TIGR03797 NHPM_micro_ABC2 NHPM bacteriocin system ABC transporter, ATP-binding protein. Members of this protein family are ABC transporter ATP-binding subunits, part of a three-gene putative bacteriocin transport operon. The other subunits include another ATP-binding subunit (TIGR03796), which has an N-terminal propeptide cleavage domain, and an HlyD homolog (TIGR03794). In a number of genomes, a conserved propeptide sequence with a classic Gly-Gly motif
Probab=100.00 E-value=2.2e-34 Score=364.83 Aligned_cols=208 Identities=28% Similarity=0.391 Sum_probs=175.2
Q ss_pred eeEeecceeeeecccccccccccccceEEeeeeeEEEeCCcEEEEEccCCCChHHHHhhhcCCCCCCeeEEEEEEcCccC
Q 000997 816 SMAFGNINYFVDVPVELKQEGVLEDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPK 895 (1194)
Q Consensus 816 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 895 (1194)
.+.++|++|.++. .++.+|+|+|++++|||++||+|+||||||||+++|+|..+ +.+|+|.+||.++
T Consensus 451 ~I~~~nvsf~Y~~-----------~~~~vL~~isl~i~~Ge~vaIvG~sGsGKSTLlklL~gl~~--p~~G~I~idg~~i 517 (686)
T TIGR03797 451 AIEVDRVTFRYRP-----------DGPLILDDVSLQIEPGEFVAIVGPSGSGKSTLLRLLLGFET--PESGSVFYDGQDL 517 (686)
T ss_pred eEEEEEEEEEcCC-----------CCccceeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCCEEEECCEEc
Confidence 5888999887731 23569999999999999999999999999999999999877 5689999999986
Q ss_pred C---hhcccceeeEeecCCCCCCCCcHHHHHHHHhhhcCCCcCcHHHHHHHHHHHHHHcCCCccc-------CCcccCCC
Q 000997 896 R---QETFARISGYCEQNDIHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLS-------GALIGLPG 965 (1194)
Q Consensus 896 ~---~~~~~~~~gyv~Q~~~~~~~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~-------~~~~~~~~ 965 (1194)
. ...+++.+|||+|++.++++ |++||+.++. + .+ ++.++++++..++.+.. |+.+|..
T Consensus 518 ~~~~~~~lr~~i~~v~Q~~~lf~g-TI~eNi~~~~----~--~~----~e~i~~al~~a~l~~~i~~lp~G~dt~ige~- 585 (686)
T TIGR03797 518 AGLDVQAVRRQLGVVLQNGRLMSG-SIFENIAGGA----P--LT----LDEAWEAARMAGLAEDIRAMPMGMHTVISEG- 585 (686)
T ss_pred CcCCHHHHHhccEEEccCCccCcc-cHHHHHhcCC----C--CC----HHHHHHHHHHcCcHHHHHhccccccccccCC-
Confidence 4 35678899999999998865 9999998742 1 22 23467778877776532 4455543
Q ss_pred CCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCeEEEEccC
Q 000997 966 INGLSTEQRKRLTIAVELVANPSIVFMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRG 1045 (1194)
Q Consensus 966 ~~~LSgGqrqrl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~g 1045 (1194)
..+||||||||++|||||+++|+||+||||||+||+.+.+.+++.|+++ ++|+|+++|+++ ..+.+|++++|+ +
T Consensus 586 G~~LSGGQrQRialARAll~~p~iLiLDEpTS~LD~~te~~i~~~L~~~---~~T~IiItHr~~--~i~~~D~Iivl~-~ 659 (686)
T TIGR03797 586 GGTLSGGQRQRLLIARALVRKPRILLFDEATSALDNRTQAIVSESLERL---KVTRIVIAHRLS--TIRNADRIYVLD-A 659 (686)
T ss_pred CCCCCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHh---CCeEEEEecChH--HHHcCCEEEEEE-C
Confidence 3679999999999999999999999999999999999999999999886 689999999975 567899999998 5
Q ss_pred cEEEEeCCC
Q 000997 1046 GELIYAGPL 1054 (1194)
Q Consensus 1046 G~~~~~g~~ 1054 (1194)
|+++..|+.
T Consensus 660 G~iv~~G~~ 668 (686)
T TIGR03797 660 GRVVQQGTY 668 (686)
T ss_pred CEEEEECCH
Confidence 899999984
No 435
>PRK10771 thiQ thiamine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=9.3e-34 Score=311.58 Aligned_cols=201 Identities=22% Similarity=0.391 Sum_probs=168.7
Q ss_pred cceEeEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCceeeEEEECCccCCCCCC-CceEEEEecCCCCCCCCCHHHHHH
Q 000997 153 DLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVP-PRTSAYVSQQDWQVAEMTVRETLD 231 (1194)
Q Consensus 153 ~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lTV~E~l~ 231 (1194)
|+|+++++|++++|+|||||||||||++|+|.+++. +|+|.++|.++..... ++.++|++|++.+++.+||.||+.
T Consensus 17 ~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~ 93 (232)
T PRK10771 17 RFDLTVERGERVAILGPSGAGKSTLLNLIAGFLTPA---SGSLTLNGQDHTTTPPSRRPVSMLFQENNLFSHLTVAQNIG 93 (232)
T ss_pred eeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCeecCcCChhhccEEEEecccccccCCcHHHHHh
Confidence 899999999999999999999999999999998876 8999999988754322 357999999998899999999998
Q ss_pred HhhhccCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhccCcchhHHHHHHHHHhCCcccccccccCccCCCCChhh
Q 000997 232 FAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEMLKGISGGQ 311 (1194)
Q Consensus 232 f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~k~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~LSGGq 311 (1194)
+.... ... .. . .....++.+++.+||++..++.+. .|||||
T Consensus 94 ~~~~~-~~~--~~---~----------------------------~~~~~~~~~l~~~~l~~~~~~~~~-----~LS~G~ 134 (232)
T PRK10771 94 LGLNP-GLK--LN---A----------------------------AQREKLHAIARQMGIEDLLARLPG-----QLSGGQ 134 (232)
T ss_pred ccccc-ccC--CC---H----------------------------HHHHHHHHHHHHcCcHHHHhCCcc-----cCCHHH
Confidence 75321 000 00 0 012247788999999887777664 699999
Q ss_pred hhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEcCCeEEEecC
Q 000997 312 KKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEGQIVYQGP 391 (1194)
Q Consensus 312 kqRvsia~al~~~~~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~~G~iv~~G~ 391 (1194)
||||+||+|++.+|++++|||||+|||+.++..+.+.|+++.+.. +++++.++|+..++.+++|+|++|++|++++.|+
T Consensus 135 ~qrv~laral~~~p~lllLDEP~~gLD~~~~~~~~~~l~~~~~~~-~~tiii~sH~~~~~~~~~d~i~~l~~g~i~~~g~ 213 (232)
T PRK10771 135 RQRVALARCLVREQPILLLDEPFSALDPALRQEMLTLVSQVCQER-QLTLLMVSHSLEDAARIAPRSLVVADGRIAWDGP 213 (232)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhc-CCEEEEEECCHHHHHHhCCEEEEEECCEEEEeCC
Confidence 999999999999999999999999999999999999999886533 4456668888899999999999999999999999
Q ss_pred hhhHH
Q 000997 392 RVSVL 396 (1194)
Q Consensus 392 ~~~~~ 396 (1194)
.+++.
T Consensus 214 ~~~~~ 218 (232)
T PRK10771 214 TDELL 218 (232)
T ss_pred HHHHH
Confidence 87764
No 436
>PRK14238 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.9e-34 Score=318.91 Aligned_cols=218 Identities=22% Similarity=0.258 Sum_probs=169.8
Q ss_pred eeEeecceeeeecccccccccccccceEEeeeeeEEEeCCcEEEEEccCCCChHHHHhhhcCCCC--C-CeeEEEEEEcC
Q 000997 816 SMAFGNINYFVDVPVELKQEGVLEDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKT--G-GIIEGDIYISG 892 (1194)
Q Consensus 816 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~--~-~~~~G~i~i~g 892 (1194)
.+.++|+++.+ +++.+|+|+|++|++||++||+|+||||||||+++|+|..+ + .+.+|+|.++|
T Consensus 24 ~l~~~~l~~~~-------------~~~~il~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g 90 (271)
T PRK14238 24 VFDTQNLNLWY-------------GEDHALKNINLDIHENEVTAIIGPSGCGKSTYIKTLNRMVELVPSVKTTGKILYRD 90 (271)
T ss_pred EEEEeeeEEEE-------------CCcceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhccCCCCCCCceeEEECC
Confidence 36667776644 23469999999999999999999999999999999999754 1 13689999999
Q ss_pred ccCCh-----hcccceeeEeecCCCCCCCCcHHHHHHHHhhhcCCCcCcHHHHHHHHHHHHHHcCCCc-ccCCcccCCCC
Q 000997 893 YPKRQ-----ETFARISGYCEQNDIHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTS-LSGALIGLPGI 966 (1194)
Q Consensus 893 ~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~-~~~~~~~~~~~ 966 (1194)
.++.. ..+++.+||++|++.+++ .|++||+.+....+.. .......+.+.++++.+++.. +.+.+ . ..+
T Consensus 91 ~~~~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~eni~~~~~~~~~--~~~~~~~~~~~~~l~~~~~~~~l~~~~-~-~~~ 165 (271)
T PRK14238 91 QNIFDKSYSVEELRTNVGMVFQKPNPFP-KSIYDNVTYGPKIHGI--KDKKTLDEIVEKSLRGAAIWDELKDRL-H-DNA 165 (271)
T ss_pred EEcccccccHHHHhhhEEEEecCCcccc-ccHHHHHHHHHHhcCC--CcHHHHHHHHHHHHHHcCCcchHHHHH-h-cCc
Confidence 87631 234667999999988877 4999999886533211 112222345566777665431 21111 1 124
Q ss_pred CCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCeEEEEccCc
Q 000997 967 NGLSTEQRKRLTIAVELVANPSIVFMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGG 1046 (1194)
Q Consensus 967 ~~LSgGqrqrl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gG 1046 (1194)
..||||||||++|||+|+.+|+||+|||||+|||+.+...+.+.|+++.+ ++|||+++|+++ .+.+.+|++++|+ +|
T Consensus 166 ~~LSgGe~qrv~laraL~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~-~~tiiivsH~~~-~i~~~~d~i~~l~-~G 242 (271)
T PRK14238 166 YGLSGGQQQRLCIARCLAIEPDVILMDEPTSALDPISTLKVEELVQELKK-DYSIIIVTHNMQ-QAARISDKTAFFL-NG 242 (271)
T ss_pred ccCCHHHHHHHHHHHHHHcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHc-CCEEEEEEcCHH-HHHHhCCEEEEEE-CC
Confidence 68999999999999999999999999999999999999999999999865 799999999976 4667899999998 47
Q ss_pred EEEEeCCC
Q 000997 1047 ELIYAGPL 1054 (1194)
Q Consensus 1047 ~~~~~g~~ 1054 (1194)
+++..|+.
T Consensus 243 ~i~~~g~~ 250 (271)
T PRK14238 243 YVNEYDDT 250 (271)
T ss_pred EEEEeCCH
Confidence 89988874
No 437
>PRK15112 antimicrobial peptide ABC system ATP-binding protein SapF; Provisional
Probab=100.00 E-value=8.2e-34 Score=318.23 Aligned_cols=207 Identities=22% Similarity=0.265 Sum_probs=169.6
Q ss_pred eeeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCceeeEEEECCccCCCCC---CCceEEEEecCCC--CCC
Q 000997 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV---PPRTSAYVSQQDW--QVA 222 (1194)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~~---~~~~~~yv~Q~d~--~~~ 222 (1194)
+++|+|+|+++++|++++|+|||||||||||++|+|.++|. +|+|.++|.++.... .++.++|++|++. +++
T Consensus 26 ~~~l~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~~~~~~ 102 (267)
T PRK15112 26 VEAVKPLSFTLREGQTLAIIGENGSGKSTLAKMLAGMIEPT---SGELLIDDHPLHFGDYSYRSQRIRMIFQDPSTSLNP 102 (267)
T ss_pred cceeeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhCCCCCC---CCEEEECCEECCCCchhhHhccEEEEecCchhhcCc
Confidence 46999999999999999999999999999999999999876 999999998875321 1346999999974 567
Q ss_pred CCCHHHHHHHhhhccCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhccCcchhHHHHHHHHHhCCc-ccccccccC
Q 000997 223 EMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLD-TCADTLVGD 301 (1194)
Q Consensus 223 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~k~~~~~~~~~~~~~~~~l~~lgL~-~~~dt~vg~ 301 (1194)
.+||.|++.+..+...... . .+....++.+++.+||. +..++.+
T Consensus 103 ~~tv~~~l~~~~~~~~~~~-------------------~--------------~~~~~~~~~~l~~~~l~~~~~~~~~-- 147 (267)
T PRK15112 103 RQRISQILDFPLRLNTDLE-------------------P--------------EQREKQIIETLRQVGLLPDHASYYP-- 147 (267)
T ss_pred chhHHHHHHHHHHhccCCC-------------------H--------------HHHHHHHHHHHHHcCCChHHHhcCc--
Confidence 8899999987543221000 0 00122467889999994 5555544
Q ss_pred ccCCCCChhhhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEE
Q 000997 302 EMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILL 381 (1194)
Q Consensus 302 ~~~~~LSGGqkqRvsia~al~~~~~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL 381 (1194)
..|||||||||+||+||+.+|++|+|||||+|||+.+...+.+.|+++++.. +++|+.++|+.+++..++|++++|
T Consensus 148 ---~~LS~G~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~-g~tviivsH~~~~~~~~~d~i~~l 223 (267)
T PRK15112 148 ---HMLAPGQKQRLGLARALILRPKVIIADEALASLDMSMRSQLINLMLELQEKQ-GISYIYVTQHLGMMKHISDQVLVM 223 (267)
T ss_pred ---hhcCHHHHHHHHHHHHHHhCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHc-CcEEEEEeCCHHHHHHhcCEEEEE
Confidence 4699999999999999999999999999999999999999999999987533 455666888899999999999999
Q ss_pred cCCeEEEecChhhHH
Q 000997 382 SEGQIVYQGPRVSVL 396 (1194)
Q Consensus 382 ~~G~iv~~G~~~~~~ 396 (1194)
++|++++.|+.+++.
T Consensus 224 ~~G~i~~~~~~~~~~ 238 (267)
T PRK15112 224 HQGEVVERGSTADVL 238 (267)
T ss_pred ECCEEEecCCHHHHh
Confidence 999999999887764
No 438
>PRK14246 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1e-33 Score=315.26 Aligned_cols=208 Identities=25% Similarity=0.316 Sum_probs=165.0
Q ss_pred cceEEeeeeeEEEeCCcEEEEEccCCCChHHHHhhhcCCCCC--C--eeEEEEEEcCccCC---hhcccceeeEeecCCC
Q 000997 840 DRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTG--G--IIEGDIYISGYPKR---QETFARISGYCEQNDI 912 (1194)
Q Consensus 840 ~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~--~--~~~G~i~i~g~~~~---~~~~~~~~gyv~Q~~~ 912 (1194)
+++.+|+||||++.+||++||+|+||||||||+++|+|...+ | .+.|++.++|.+.. ...+++.++|++|++.
T Consensus 21 ~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~iaG~~~~~~G~v~~~G~~~~~g~~~~~~~~~~~~~~i~~~~q~~~ 100 (257)
T PRK14246 21 NDKAILKDITIKIPNNSIFGIMGPSGSGKSTLLKVLNRLIEIYDSKIKVDGKVLYFGKDIFQIDAIKLRKEVGMVFQQPN 100 (257)
T ss_pred CCceeEeceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCcCceeEcCEEEECCcccccCCHHHHhcceEEEccCCc
Confidence 456799999999999999999999999999999999997652 1 12355555565542 2234667999999999
Q ss_pred CCCCCcHHHHHHHHhhhcCCCcCcHHHHHHHHHHHHHHcCCCccc-CCcccCCCCCCCCHHHHHHHHHHHHHhhCCCEEE
Q 000997 913 HSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLS-GALIGLPGINGLSTEQRKRLTIAVELVANPSIVF 991 (1194)
Q Consensus 913 ~~~~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~-~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~ill 991 (1194)
+++.+|++||+.+....... ....+..+.++++++.+++.+.. +.... .+..||+|||||++|||+|+.+|++|+
T Consensus 101 ~~~~~tv~~nl~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~~~~~~~~~~--~~~~LS~G~~qrl~laral~~~P~lll 176 (257)
T PRK14246 101 PFPHLSIYDNIAYPLKSHGI--KEKREIKKIVEECLRKVGLWKEVYDRLNS--PASQLSGGQQQRLTIARALALKPKVLL 176 (257)
T ss_pred cCCCCcHHHHHHHHHHhcCC--CCHHHHHHHHHHHHHHcCCCccchhhhcC--CcccCCHHHHHHHHHHHHHHcCCCEEE
Confidence 99999999999886433211 12233445678889999985421 11111 235799999999999999999999999
Q ss_pred EeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCeEEEEccCcEEEEeCCC
Q 000997 992 MDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1194)
Q Consensus 992 LDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~ 1054 (1194)
|||||+|||+.+...+.+.|+++.+ ++|||+++|+++ .+.+.||++++|+ +|+++..|+.
T Consensus 177 lDEPt~~LD~~~~~~l~~~l~~~~~-~~tiilvsh~~~-~~~~~~d~v~~l~-~g~i~~~g~~ 236 (257)
T PRK14246 177 MDEPTSMIDIVNSQAIEKLITELKN-EIAIVIVSHNPQ-QVARVADYVAFLY-NGELVEWGSS 236 (257)
T ss_pred EcCCCccCCHHHHHHHHHHHHHHhc-CcEEEEEECCHH-HHHHhCCEEEEEE-CCEEEEECCH
Confidence 9999999999999999999999864 799999999976 4667899999998 5799888875
No 439
>PRK10253 iron-enterobactin transporter ATP-binding protein; Provisional
Probab=100.00 E-value=9.8e-34 Score=317.40 Aligned_cols=209 Identities=24% Similarity=0.372 Sum_probs=172.1
Q ss_pred eeeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCceeeEEEECCccCCCCCC---CceEEEEecCCCCCCCC
Q 000997 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVP---PRTSAYVSQQDWQVAEM 224 (1194)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~l 224 (1194)
..+|+|+|+++++|++++|+|||||||||||++|+|.+++. +|+|.++|+++..... ++.++|++|++..++.+
T Consensus 20 ~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~~~~~~ 96 (265)
T PRK10253 20 YTVAENLTVEIPDGHFTAIIGPNGCGKSTLLRTLSRLMTPA---HGHVWLDGEHIQHYASKEVARRIGLLAQNATTPGDI 96 (265)
T ss_pred EEEeeecceEECCCCEEEEECCCCCCHHHHHHHHcCCCCCC---CcEEEECCEEhhhCCHHHHhhheEEeeccCcCCCCC
Confidence 36999999999999999999999999999999999998876 9999999987754322 35699999999888899
Q ss_pred CHHHHHHHhhhcc-CCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhccCcchhHHHHHHHHHhCCcccccccccCcc
Q 000997 225 TVRETLDFAGQCQ-GVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEM 303 (1194)
Q Consensus 225 TV~E~l~f~~~~~-~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~k~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~ 303 (1194)
||+||+.+...-. ...... + ......++.+++.+||.+..++.+
T Consensus 97 tv~~~~~~~~~~~~~~~~~~----------------~---------------~~~~~~~~~~l~~~~l~~~~~~~~---- 141 (265)
T PRK10253 97 TVQELVARGRYPHQPLFTRW----------------R---------------KEDEEAVTKAMQATGITHLADQSV---- 141 (265)
T ss_pred cHHHHHHhCcccccccccCC----------------C---------------HHHHHHHHHHHHHcCCHHHhcCCc----
Confidence 9999998752100 000000 0 001224678899999987666654
Q ss_pred CCCCChhhhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEcC
Q 000997 304 LKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSE 383 (1194)
Q Consensus 304 ~~~LSGGqkqRvsia~al~~~~~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~~ 383 (1194)
+.||||||||++||+|++.+|++++|||||+|||+.++..+.+.|+++++.. +++|+.++|+..++.+++|+|++|++
T Consensus 142 -~~LS~Gq~qrv~laral~~~p~llllDEPt~gLD~~~~~~l~~~L~~l~~~~-~~tiii~tH~~~~~~~~~d~i~~l~~ 219 (265)
T PRK10253 142 -DTLSGGQRQRAWIAMVLAQETAIMLLDEPTTWLDISHQIDLLELLSELNREK-GYTLAAVLHDLNQACRYASHLIALRE 219 (265)
T ss_pred -ccCChHHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHHHhc-CCEEEEEeCCHHHHHHhCCEEEEEEC
Confidence 4699999999999999999999999999999999999999999999987533 45566688888999999999999999
Q ss_pred CeEEEecChhhHH
Q 000997 384 GQIVYQGPRVSVL 396 (1194)
Q Consensus 384 G~iv~~G~~~~~~ 396 (1194)
|++++.|+.+++.
T Consensus 220 G~i~~~g~~~~~~ 232 (265)
T PRK10253 220 GKIVAQGAPKEIV 232 (265)
T ss_pred CEEEEeCCHHHHh
Confidence 9999999987764
No 440
>PRK14239 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.1e-33 Score=312.90 Aligned_cols=210 Identities=22% Similarity=0.323 Sum_probs=165.8
Q ss_pred eeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHhcCcC--CCCceeeEEEECCccCCCC-----CCCceEEEEecCCCCC
Q 000997 149 TILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLG--HHLQVSGKITYNGHGFKEF-----VPPRTSAYVSQQDWQV 221 (1194)
Q Consensus 149 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~--~~~~~~G~i~~~G~~~~~~-----~~~~~~~yv~Q~d~~~ 221 (1194)
++|+|+|++|++||+++|+|||||||||||++|+|... |....+|+|.++|+++... ..++.++|++|++.++
T Consensus 19 ~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~v~q~~~~~ 98 (252)
T PRK14239 19 KALNSVSLDFYPNEITALIGPSGSGKSTLLRSINRMNDLNPEVTITGSIVYNGHNIYSPRTDTVDLRKEIGMVFQQPNPF 98 (252)
T ss_pred eeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhcccccCCCCCccceEEECCEECcCcccchHhhhhcEEEEecCCccC
Confidence 59999999999999999999999999999999999853 3222489999999877431 1246799999998877
Q ss_pred CCCCHHHHHHHhhhccCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhccCcchhHHHHHHHHHhCCcccccccccC
Q 000997 222 AEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGD 301 (1194)
Q Consensus 222 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~k~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 301 (1194)
+ +||+||+.+.....+... + ......++.+++.+|+.....+.. +
T Consensus 99 ~-~tv~enl~~~~~~~~~~~--~-------------------------------~~~~~~~~~~l~~~~l~~~~~~~~-~ 143 (252)
T PRK14239 99 P-MSIYENVVYGLRLKGIKD--K-------------------------------QVLDEAVEKSLKGASIWDEVKDRL-H 143 (252)
T ss_pred c-CcHHHHHHHHHHHcCCCc--H-------------------------------HHHHHHHHHHHHHcCCchhHHHHH-h
Confidence 7 899999988643221100 0 000123566777888743211111 2
Q ss_pred ccCCCCChhhhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEE
Q 000997 302 EMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILL 381 (1194)
Q Consensus 302 ~~~~~LSGGqkqRvsia~al~~~~~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL 381 (1194)
.....|||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|+++.+ + ++|+.++|+.+++.+.+|+|++|
T Consensus 144 ~~~~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~--~-~tii~~sH~~~~~~~~~d~i~~l 220 (252)
T PRK14239 144 DSALGLSGGQQQRVCIARVLATSPKIILLDEPTSALDPISAGKIEETLLGLKD--D-YTMLLVTRSMQQASRISDRTGFF 220 (252)
T ss_pred cCcccCCHHHHHHHHHHHHHhcCCCEEEEcCCccccCHHHHHHHHHHHHHHhh--C-CeEEEEECCHHHHHHhCCEEEEE
Confidence 33457999999999999999999999999999999999999999999998853 3 45666888888999999999999
Q ss_pred cCCeEEEecChhhHH
Q 000997 382 SEGQIVYQGPRVSVL 396 (1194)
Q Consensus 382 ~~G~iv~~G~~~~~~ 396 (1194)
++|++++.|+.+++.
T Consensus 221 ~~G~i~~~g~~~~~~ 235 (252)
T PRK14239 221 LDGDLIEYNDTKQMF 235 (252)
T ss_pred ECCEEEEeCCHHHHH
Confidence 999999999988763
No 441
>cd03289 ABCC_CFTR2 The CFTR subfamily domain 2. The cystic fibrosis transmembrane regulator (CFTR), the product of the gene mutated in patients with cystic fibrosis, has adapted the ABC transporter structural motif to form a tightly regulated anion channel at the apical surface of many epithelia. Use of the term assembly of a functional ion channel implies the coming together of subunits or at least smaller not-yet functional components of the active whole. In fact, on the basis of current knowledge only the CFTR polypeptide itself is required to form an ATP- and protein kinase A-dependent low-conductance chloride channel of the type present in the apical membrane of many epithelial cells. CFTR displays the typical organization (IM-ABC)2 and carries a characteristic hydrophilic R-domain that separates IM1-ABC1 from IM2-ABC2.
Probab=100.00 E-value=4.2e-34 Score=319.47 Aligned_cols=196 Identities=21% Similarity=0.297 Sum_probs=162.2
Q ss_pred eEEeeeeeEEEeCCcEEEEEccCCCChHHHHhhhcCCCCCCeeEEEEEEcCccCCh---hcccceeeEeecCCCCCCCCc
Q 000997 842 LQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ---ETFARISGYCEQNDIHSPGLT 918 (1194)
Q Consensus 842 ~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~---~~~~~~~gyv~Q~~~~~~~lT 918 (1194)
..+|+|||++|++||++||+|+||||||||+++|+|... .+|+|+++|.++.. ...++.++||+|++.+++. |
T Consensus 17 ~~~l~~isl~I~~Ge~~~IvG~nGsGKSTLl~~L~gl~~---~~G~I~i~g~~i~~~~~~~lr~~i~~v~q~~~lf~~-t 92 (275)
T cd03289 17 NAVLENISFSISPGQRVGLLGRTGSGKSTLLSAFLRLLN---TEGDIQIDGVSWNSVPLQKWRKAFGVIPQKVFIFSG-T 92 (275)
T ss_pred CcceeceEEEEcCCCEEEEECCCCCCHHHHHHHHhhhcC---CCcEEEECCEEhhhCCHHHHhhhEEEECCCcccchh-h
Confidence 459999999999999999999999999999999999875 36999999987632 3456789999999998875 9
Q ss_pred HHHHHHHHhhhcCCCcCcHHHHHHHHHHHHHHcCCCcccCCcccC------CCCCCCCHHHHHHHHHHHHHhhCCCEEEE
Q 000997 919 VLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGL------PGINGLSTEQRKRLTIAVELVANPSIVFM 992 (1194)
Q Consensus 919 v~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~------~~~~~LSgGqrqrl~ia~aL~~~p~illL 992 (1194)
++||+.+... .. .+.++++++.++|.+..+...+. .+...||+|||||++|||||+.+|+||+|
T Consensus 93 v~~nl~~~~~------~~----~~~~~~~l~~~gL~~~~~~~p~~l~~~~~~~g~~LS~G~~qrl~LaRall~~p~illl 162 (275)
T cd03289 93 FRKNLDPYGK------WS----DEEIWKVAEEVGLKSVIEQFPGQLDFVLVDGGCVLSHGHKQLMCLARSVLSKAKILLL 162 (275)
T ss_pred HHHHhhhccC------CC----HHHHHHHHHHcCCHHHHHhCcccccceecCCCCCCCHHHHHHHHHHHHHhcCCCEEEE
Confidence 9999963211 11 13467788888887655543321 12356999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCeEEEEccCcEEEEeCCCC
Q 000997 993 DEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLG 1055 (1194)
Q Consensus 993 DEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~~ 1055 (1194)
||||++||+.+...+++.|+++. .++|||+++|+++ ....+|++++|++ |++++.|++.
T Consensus 163 DEpts~LD~~~~~~l~~~l~~~~-~~~tii~isH~~~--~i~~~dri~vl~~-G~i~~~g~~~ 221 (275)
T cd03289 163 DEPSAHLDPITYQVIRKTLKQAF-ADCTVILSEHRIE--AMLECQRFLVIEE-NKVRQYDSIQ 221 (275)
T ss_pred ECccccCCHHHHHHHHHHHHHhc-CCCEEEEEECCHH--HHHhCCEEEEecC-CeEeecCCHH
Confidence 99999999999999999999874 5899999999975 3356999999984 7999999863
No 442
>TIGR01193 bacteriocin_ABC ABC-type bacteriocin transporter. This model describes ABC-type bacteriocin transporter. The amino terminal domain (pfam03412) processes the N-terminal leader peptide from the bacteriocin while C-terminal domains resemble ABC transporter membrane protein and ATP-binding cassette domain. In general, bacteriocins are agents which are responsible for killing or inhibiting the closely related species or even different strains of the same species. Bacteriocins are usually encoded by bacterial plasmids. Bacteriocins are named after the species and hence in literature one encounters various names e.g., leucocin from Leuconostic geldium; pedicocin from Pedicoccus acidilactici; sakacin from Lactobacillus sake etc.
Probab=100.00 E-value=6.9e-32 Score=343.32 Aligned_cols=210 Identities=22% Similarity=0.399 Sum_probs=174.0
Q ss_pred eeEeecceeeeecccccccccccccceEEeeeeeEEEeCCcEEEEEccCCCChHHHHhhhcCCCCCCeeEEEEEEcCccC
Q 000997 816 SMAFGNINYFVDVPVELKQEGVLEDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPK 895 (1194)
Q Consensus 816 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 895 (1194)
.+.++|++|.++ .++.+|+|+|++|+||+.+||+|+||||||||+++|+|... +.+|+|++||.++
T Consensus 473 ~I~~~~vsf~y~------------~~~~iL~~isl~i~~G~~vaIvG~SGsGKSTLlklL~gl~~--p~~G~I~idg~~i 538 (708)
T TIGR01193 473 DIVINDVSYSYG------------YGSNILSDISLTIKMNSKTTIVGMSGSGKSTLAKLLVGFFQ--ARSGEILLNGFSL 538 (708)
T ss_pred cEEEEEEEEEcC------------CCCcceeceeEEECCCCEEEEECCCCCCHHHHHHHHhccCC--CCCcEEEECCEEH
Confidence 578888888763 12469999999999999999999999999999999999876 5689999999876
Q ss_pred C---hhcccceeeEeecCCCCCCCCcHHHHHHHHhhhcCCCcCcHHHHHHHHHHHHHHcCCCcc-------cCCcccCCC
Q 000997 896 R---QETFARISGYCEQNDIHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSL-------SGALIGLPG 965 (1194)
Q Consensus 896 ~---~~~~~~~~gyv~Q~~~~~~~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~-------~~~~~~~~~ 965 (1194)
. ...+++.+|||+|++.+++. |++||+.++.. + +.+. +.++++++..++.+. .|+.++..
T Consensus 539 ~~~~~~~lr~~i~~v~Q~~~lf~g-TI~eNi~l~~~---~-~~~~----~~i~~a~~~a~l~~~i~~lp~gldt~i~e~- 608 (708)
T TIGR01193 539 KDIDRHTLRQFINYLPQEPYIFSG-SILENLLLGAK---E-NVSQ----DEIWAACEIAEIKDDIENMPLGYQTELSEE- 608 (708)
T ss_pred HHcCHHHHHHheEEEecCceehhH-HHHHHHhccCC---C-CCCH----HHHHHHHHHhCCHHHHHhcccccCcEecCC-
Confidence 4 35678899999999998876 99999987521 1 2222 335666666666432 34555543
Q ss_pred CCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCeEEEEccC
Q 000997 966 INGLSTEQRKRLTIAVELVANPSIVFMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRG 1045 (1194)
Q Consensus 966 ~~~LSgGqrqrl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~g 1045 (1194)
..+||||||||++|||||+++|+||+||||||+||+.+...+++.|+++ +|+|+|+++|+++ ..+.+|++++|++
T Consensus 609 G~~LSgGQrQRialARall~~p~iliLDE~Ts~LD~~te~~i~~~L~~~--~~~T~IiitHr~~--~~~~~D~i~~l~~- 683 (708)
T TIGR01193 609 GSSISGGQKQRIALARALLTDSKVLILDESTSNLDTITEKKIVNNLLNL--QDKTIIFVAHRLS--VAKQSDKIIVLDH- 683 (708)
T ss_pred CCCCCHHHHHHHHHHHHHhhCCCEEEEeCccccCCHHHHHHHHHHHHHh--cCCEEEEEecchH--HHHcCCEEEEEEC-
Confidence 3679999999999999999999999999999999999999999999985 5899999999985 5678999999984
Q ss_pred cEEEEeCCC
Q 000997 1046 GELIYAGPL 1054 (1194)
Q Consensus 1046 G~~~~~g~~ 1054 (1194)
|+++..|+.
T Consensus 684 G~i~~~G~~ 692 (708)
T TIGR01193 684 GKIIEQGSH 692 (708)
T ss_pred CEEEEECCH
Confidence 899999984
No 443
>PRK11160 cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed
Probab=100.00 E-value=7.1e-34 Score=352.21 Aligned_cols=200 Identities=28% Similarity=0.449 Sum_probs=165.2
Q ss_pred eeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCceeeEEEECCccCCCCCC---CceEEEEecCCCCCCCCC
Q 000997 149 TILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVP---PRTSAYVSQQDWQVAEMT 225 (1194)
Q Consensus 149 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~lT 225 (1194)
++|+|+|++++||+.++|+||||||||||+++|+|.++|. +|+|++||.++.+... ++.++||+|++.+|+ .|
T Consensus 354 ~il~~i~~~i~~G~~~aivG~sGsGKSTL~~ll~g~~~p~---~G~I~i~g~~i~~~~~~~~r~~i~~v~Q~~~lf~-~t 429 (574)
T PRK11160 354 PVLKGLSLQIKAGEKVALLGRTGCGKSTLLQLLTRAWDPQ---QGEILLNGQPIADYSEAALRQAISVVSQRVHLFS-AT 429 (574)
T ss_pred cceecceEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CceEEECCEEhhhCCHHHHHhheeEEcccchhhc-cc
Confidence 5999999999999999999999999999999999999886 9999999999877653 567999999998776 59
Q ss_pred HHHHHHHhhhccCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhccCcchhHHHHHHHHHhCC------cccccccc
Q 000997 226 VRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGL------DTCADTLV 299 (1194)
Q Consensus 226 V~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~k~~~~~~~~~~~~~~~~l~~lgL------~~~~dt~v 299 (1194)
++|||.++.. ....+ .+.++++..|+ +++.||.|
T Consensus 430 i~~Ni~~~~~----~~~~~------------------------------------~i~~al~~~~l~~~i~~p~GldT~v 469 (574)
T PRK11160 430 LRDNLLLAAP----NASDE------------------------------------ALIEVLQQVGLEKLLEDDKGLNAWL 469 (574)
T ss_pred HHHHhhcCCC----ccCHH------------------------------------HHHHHHHHcCCHHHHcCccccCchh
Confidence 9999987531 00001 12233333333 56789999
Q ss_pred cCccCCCCChhhhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEE
Q 000997 300 GDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVI 379 (1194)
Q Consensus 300 g~~~~~~LSGGqkqRvsia~al~~~~~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vi 379 (1194)
|+. ...||||||||++||||++.+|++|+|||||++||+.++..|.+.|++..+ ++|+|+ ++|..+.+ ..+|+|+
T Consensus 470 ge~-g~~LSgGqrqRialARall~~~~ililDE~ts~lD~~t~~~i~~~l~~~~~--~~tvii-itHr~~~~-~~~d~i~ 544 (574)
T PRK11160 470 GEG-GRQLSGGEQRRLGIARALLHDAPLLLLDEPTEGLDAETERQILELLAEHAQ--NKTVLM-ITHRLTGL-EQFDRIC 544 (574)
T ss_pred cCC-CCCCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHcC--CCEEEE-EecChhHH-HhCCEEE
Confidence 975 557999999999999999999999999999999999999999999998753 455555 55555544 5699999
Q ss_pred EEcCCeEEEecChhhHHH
Q 000997 380 LLSEGQIVYQGPRVSVLD 397 (1194)
Q Consensus 380 lL~~G~iv~~G~~~~~~~ 397 (1194)
+|++|+++..|+++++.+
T Consensus 545 ~l~~G~i~~~g~~~~l~~ 562 (574)
T PRK11160 545 VMDNGQIIEQGTHQELLA 562 (574)
T ss_pred EEeCCeEEEeCCHHHHHh
Confidence 999999999999998864
No 444
>TIGR01277 thiQ thiamine ABC transporter, ATP-binding protein. This model describes the energy-transducing ATPase subunit ThiQ of the ThiBPQ thiamine (and thiamine pyrophosphate) ABC transporter in several Proteobacteria. This protein is found so far only in Proteobacteria, and is found in complete genomes only if the ThiB and ThiP subunits are also found.
Probab=100.00 E-value=1.2e-33 Score=306.58 Aligned_cols=199 Identities=21% Similarity=0.310 Sum_probs=166.0
Q ss_pred eeecceEeEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCceeeEEEECCccCCCCC-CCceEEEEecCCCCCCCCCHHH
Q 000997 150 ILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV-PPRTSAYVSQQDWQVAEMTVRE 228 (1194)
Q Consensus 150 iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~~-~~~~~~yv~Q~d~~~~~lTV~E 228 (1194)
+++|+|+++++|++++|+||||||||||+++|+|.+++. +|+|.++|+++.... .++.++|++|++.+++.+|+.|
T Consensus 13 ~~~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~i~~v~q~~~~~~~~t~~e 89 (213)
T TIGR01277 13 LPMEFDLNVADGEIVAIMGPSGAGKSTLLNLIAGFIEPA---SGSIKVNDQSHTGLAPYQRPVSMLFQENNLFAHLTVRQ 89 (213)
T ss_pred cceeeEEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCC---CcEEEECCEEcccCChhccceEEEeccCccCCCCcHHH
Confidence 467999999999999999999999999999999999876 999999998875432 3467999999999899999999
Q ss_pred HHHHhhhccCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhccCcchhHHHHHHHHHhCCcccccccccCccCCCCC
Q 000997 229 TLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEMLKGIS 308 (1194)
Q Consensus 229 ~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~k~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~LS 308 (1194)
|+.+...... ... ......++++++.+||++..++.+ +.||
T Consensus 90 n~~~~~~~~~-~~~---------------------------------~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS 130 (213)
T TIGR01277 90 NIGLGLHPGL-KLN---------------------------------AEQQEKVVDAAQQVGIADYLDRLP-----EQLS 130 (213)
T ss_pred HHHhHhhccC-Ccc---------------------------------HHHHHHHHHHHHHcCcHHHhhCCc-----ccCC
Confidence 9987432100 000 001223677899999987766655 4699
Q ss_pred hhhhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEcCCeEEE
Q 000997 309 GGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEGQIVY 388 (1194)
Q Consensus 309 GGqkqRvsia~al~~~~~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~~G~iv~ 388 (1194)
|||||||+||+|++.+|++++|||||+|||..++..+.+.|+++.+.. +++|+.++|+.+++.+++|++++|++|+++.
T Consensus 131 ~G~~qrl~laral~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~-~~tii~vsh~~~~~~~~~d~v~~l~~g~i~~ 209 (213)
T TIGR01277 131 GGQRQRVALARCLVRPNPILLLDEPFSALDPLLREEMLALVKQLCSER-QRTLLMVTHHLSDARAIASQIAVVSQGKIKV 209 (213)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhc-CCEEEEEeCCHHHHHhhcCeEEEEECCeEEE
Confidence 999999999999999999999999999999999999999999986532 4566668888899999999999999999998
Q ss_pred ecC
Q 000997 389 QGP 391 (1194)
Q Consensus 389 ~G~ 391 (1194)
.|.
T Consensus 210 ~~~ 212 (213)
T TIGR01277 210 VSD 212 (213)
T ss_pred ecC
Confidence 874
No 445
>TIGR03375 type_I_sec_LssB type I secretion system ATPase, LssB family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion. This model is related to models TIGR01842 and TIGR01846, and to bacteriocin ABC transporters that cleave their substrates during export.
Probab=100.00 E-value=6.8e-34 Score=360.85 Aligned_cols=208 Identities=25% Similarity=0.389 Sum_probs=167.1
Q ss_pred eeeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCceeeEEEECCccCCCCCC---CceEEEEecCCCCCCCC
Q 000997 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVP---PRTSAYVSQQDWQVAEM 224 (1194)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~l 224 (1194)
.++|+|+|++|+||+.++|+||||||||||+++|+|.++|. +|+|.+||.++++... ++.++||+|++.+|. .
T Consensus 478 ~~vL~~i~l~i~~G~~iaIvG~sGsGKSTLlklL~gl~~p~---~G~I~idg~~l~~~~~~~lr~~i~~v~Q~~~lf~-~ 553 (694)
T TIGR03375 478 TPALDNVSLTIRPGEKVAIIGRIGSGKSTLLKLLLGLYQPT---EGSVLLDGVDIRQIDPADLRRNIGYVPQDPRLFY-G 553 (694)
T ss_pred ccceeeeeEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CceEEECCEEhhhCCHHHHHhccEEECCChhhhh-h
Confidence 35999999999999999999999999999999999999886 9999999999877653 578999999998776 5
Q ss_pred CHHHHHHHhhhccCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhccCcchhHHHHHHHHHhCCcccccccccCccC
Q 000997 225 TVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEML 304 (1194)
Q Consensus 225 TV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~k~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~ 304 (1194)
|++|||.++.. ....+.+.+++ +.+. .+..+ -.|++..||.+|+. .
T Consensus 554 TI~eNi~~~~~----~~~~~~i~~a~------------------~~~~---------l~~~i--~~lp~gl~T~i~e~-G 599 (694)
T TIGR03375 554 TLRDNIALGAP----YADDEEILRAA------------------ELAG---------VTEFV--RRHPDGLDMQIGER-G 599 (694)
T ss_pred hHHHHHhCCCC----CCCHHHHHHHH------------------HHcC---------hHHHH--HhCcccccceecCC-C
Confidence 99999987521 01111111111 1000 11111 24677889999975 4
Q ss_pred CCCChhhhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEcCC
Q 000997 305 KGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEG 384 (1194)
Q Consensus 305 ~~LSGGqkqRvsia~al~~~~~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~~G 384 (1194)
.+||||||||++||||++.+|++++||||||+||+.+...|.+.|+++.+ ++|+|+ ++|..+ ....||+|++|++|
T Consensus 600 ~~LSgGQrQRlalARall~~p~iliLDE~Ts~LD~~te~~i~~~l~~~~~--~~T~ii-ItHrl~-~~~~~D~iivl~~G 675 (694)
T TIGR03375 600 RSLSGGQRQAVALARALLRDPPILLLDEPTSAMDNRSEERFKDRLKRWLA--GKTLVL-VTHRTS-LLDLVDRIIVMDNG 675 (694)
T ss_pred CCCCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHhC--CCEEEE-EecCHH-HHHhCCEEEEEeCC
Confidence 57999999999999999999999999999999999999999999998753 455555 555554 56789999999999
Q ss_pred eEEEecChhhHHH
Q 000997 385 QIVYQGPRVSVLD 397 (1194)
Q Consensus 385 ~iv~~G~~~~~~~ 397 (1194)
+++++|+++++++
T Consensus 676 ~i~e~G~~~eLl~ 688 (694)
T TIGR03375 676 RIVADGPKDQVLE 688 (694)
T ss_pred EEEeeCCHHHHHH
Confidence 9999999998865
No 446
>PRK11231 fecE iron-dicitrate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=7.1e-34 Score=316.97 Aligned_cols=208 Identities=25% Similarity=0.365 Sum_probs=170.7
Q ss_pred eeeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCceeeEEEECCccCCCCC---CCceEEEEecCCCCCCCC
Q 000997 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV---PPRTSAYVSQQDWQVAEM 224 (1194)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~~---~~~~~~yv~Q~d~~~~~l 224 (1194)
.++|+|+|+++++|++++|+|||||||||||++|+|.+++. +|+|.++|.++.... .++.++|++|++.+++.+
T Consensus 15 ~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~~~ 91 (255)
T PRK11231 15 KRILNDLSLSLPTGKITALIGPNGCGKSTLLKCFARLLTPQ---SGTVFLGDKPISMLSSRQLARRLALLPQHHLTPEGI 91 (255)
T ss_pred EEEEeeeeeEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCC---CcEEEECCEEhHHCCHHHHhhheEEecccCCCCCCc
Confidence 46999999999999999999999999999999999998775 999999998765432 235699999998888889
Q ss_pred CHHHHHHHhhhccCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhccCcchhHHHHHHHHHhCCcccccccccCccC
Q 000997 225 TVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEML 304 (1194)
Q Consensus 225 TV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~k~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~ 304 (1194)
||.||+.|+..-.. ..+. ..+ ......++++++.+||++..++.++
T Consensus 92 tv~~~i~~~~~~~~--~~~~-------------~~~---------------~~~~~~~~~~l~~~~l~~~~~~~~~---- 137 (255)
T PRK11231 92 TVRELVAYGRSPWL--SLWG-------------RLS---------------AEDNARVNQAMEQTRINHLADRRLT---- 137 (255)
T ss_pred cHHHHHHhccchhh--hhcc-------------CCC---------------HHHHHHHHHHHHHcCCHHHHcCCcc----
Confidence 99999988531000 0000 000 0012246778899999877776654
Q ss_pred CCCChhhhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEcCC
Q 000997 305 KGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEG 384 (1194)
Q Consensus 305 ~~LSGGqkqRvsia~al~~~~~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~~G 384 (1194)
.|||||||||+||+|++.+|++|+|||||+|||+.+...+.+.|++++.. +++|+.++|..+++.+++|++++|++|
T Consensus 138 -~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~l~~~--~~tiii~tH~~~~~~~~~d~i~~l~~G 214 (255)
T PRK11231 138 -DLSGGQRQRAFLAMVLAQDTPVVLLDEPTTYLDINHQVELMRLMRELNTQ--GKTVVTVLHDLNQASRYCDHLVVLANG 214 (255)
T ss_pred -cCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHC--CCEEEEEECCHHHHHHhcCEEEEEECC
Confidence 69999999999999999999999999999999999999999999988652 455666888899999999999999999
Q ss_pred eEEEecChhhH
Q 000997 385 QIVYQGPRVSV 395 (1194)
Q Consensus 385 ~iv~~G~~~~~ 395 (1194)
++++.|+.+++
T Consensus 215 ~i~~~~~~~~~ 225 (255)
T PRK11231 215 HVMAQGTPEEV 225 (255)
T ss_pred eEEEEcCHHHh
Confidence 99999988765
No 447
>PRK14240 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.2e-33 Score=312.37 Aligned_cols=210 Identities=24% Similarity=0.357 Sum_probs=165.0
Q ss_pred eeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHhcCcCC--CCceeeEEEECCccCCCC-----CCCceEEEEecCCCCC
Q 000997 149 TILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGH--HLQVSGKITYNGHGFKEF-----VPPRTSAYVSQQDWQV 221 (1194)
Q Consensus 149 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~--~~~~~G~i~~~G~~~~~~-----~~~~~~~yv~Q~d~~~ 221 (1194)
++|+|+|++|++||+++|+|||||||||||++|+|.+++ ..+.+|+|.++|+++... ..++.++|++|++.++
T Consensus 17 ~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~~ 96 (250)
T PRK14240 17 QALKKINLDIEENQVTALIGPSGCGKSTFLRTLNRMNDLIPSVKIEGEVLLDGQDIYKSDIDVNQLRKRVGMVFQQPNPF 96 (250)
T ss_pred eeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEccccccchHHHhccEEEEecCCccC
Confidence 599999999999999999999999999999999998753 222589999999887531 1245799999998877
Q ss_pred CCCCHHHHHHHhhhccCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhccCcchhHHHHHHHHHhCCcccccccccC
Q 000997 222 AEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGD 301 (1194)
Q Consensus 222 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~k~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 301 (1194)
+ +||+||+.+.....+.... . .....++.+++.+++.+...... +
T Consensus 97 ~-~t~~~ni~~~~~~~~~~~~-------------------~--------------~~~~~~~~~l~~~~l~~~l~~~~-~ 141 (250)
T PRK14240 97 P-MSIYDNVAYGPRTHGIKDK-------------------K--------------KLDEIVEKSLKGAALWDEVKDRL-K 141 (250)
T ss_pred c-ccHHHHHHHHHHhcCCCCH-------------------H--------------HHHHHHHHHHHHcCCchhhHHHH-h
Confidence 7 8999999886433221000 0 00123556677777643211111 1
Q ss_pred ccCCCCChhhhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEE
Q 000997 302 EMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILL 381 (1194)
Q Consensus 302 ~~~~~LSGGqkqRvsia~al~~~~~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL 381 (1194)
..+..|||||||||+|||||+.+|++++|||||+|||+.++..+.+.|+++.+ + ++|+.++|+.+++.+++|+|++|
T Consensus 142 ~~~~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~--~-~tiii~sH~~~~~~~~~d~v~~l 218 (250)
T PRK14240 142 KSALGLSGGQQQRLCIARALAVEPEVLLMDEPTSALDPISTLKIEELIQELKK--D-YTIVIVTHNMQQASRISDKTAFF 218 (250)
T ss_pred cCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhc--C-CeEEEEEeCHHHHHhhCCEEEEE
Confidence 23457999999999999999999999999999999999999999999998853 3 45666788888999999999999
Q ss_pred cCCeEEEecChhhHH
Q 000997 382 SEGQIVYQGPRVSVL 396 (1194)
Q Consensus 382 ~~G~iv~~G~~~~~~ 396 (1194)
++|+++..|+.+++.
T Consensus 219 ~~G~i~~~~~~~~~~ 233 (250)
T PRK14240 219 LNGEIVEFGDTVDLF 233 (250)
T ss_pred ECCEEEEeCCHHHHH
Confidence 999999999987763
No 448
>TIGR00968 3a0106s01 sulfate ABC transporter, ATP-binding protein.
Probab=100.00 E-value=1.3e-33 Score=311.22 Aligned_cols=206 Identities=27% Similarity=0.397 Sum_probs=172.0
Q ss_pred eeeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCceeeEEEECCccCCCCCC-CceEEEEecCCCCCCCCCH
Q 000997 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVP-PRTSAYVSQQDWQVAEMTV 226 (1194)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lTV 226 (1194)
+++|+|+|+++.+|++++|+||||||||||+++|+|.+++. +|+|.++|.++..... ++.++|++|++.+++.+|+
T Consensus 13 ~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~---~G~i~i~g~~~~~~~~~~~~i~~~~q~~~~~~~~t~ 89 (237)
T TIGR00968 13 FQALDDVNLEVPTGSLVALLGPSGSGKSTLLRIIAGLEQPD---SGRIRLNGQDATRVHARDRKIGFVFQHYALFKHLTV 89 (237)
T ss_pred eeeeeeEEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---ceEEEECCEEcCcCChhhcCEEEEecChhhccCCcH
Confidence 36999999999999999999999999999999999998776 9999999988754332 4679999999988889999
Q ss_pred HHHHHHhhhccCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhccCcchhHHHHHHHHHhCCcccccccccCccCCC
Q 000997 227 RETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEMLKG 306 (1194)
Q Consensus 227 ~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~k~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~ 306 (1194)
.||+.+.....+... . .....++++++.++|....++.+ +.
T Consensus 90 ~enl~~~~~~~~~~~--~--------------------------------~~~~~~~~~l~~~~l~~~~~~~~-----~~ 130 (237)
T TIGR00968 90 RDNIAFGLEIRKHPK--A--------------------------------KIKARVEELLELVQLEGLGDRYP-----NQ 130 (237)
T ss_pred HHHHHhHHHhcCCCH--H--------------------------------HHHHHHHHHHHHcCCHhHhhCCh-----hh
Confidence 999987643221100 0 00123577888999987666655 46
Q ss_pred CChhhhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEcCCeE
Q 000997 307 ISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEGQI 386 (1194)
Q Consensus 307 LSGGqkqRvsia~al~~~~~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~~G~i 386 (1194)
||||||||++||++|+.+|++++|||||+|||..+...+.+.|++++... +.+|+.++|..+++.+++|++++|++|++
T Consensus 131 lS~G~~qrl~laral~~~p~llllDEP~~~LD~~~~~~~~~~l~~~~~~~-~~tvli~sH~~~~~~~~~d~i~~l~~g~i 209 (237)
T TIGR00968 131 LSGGQRQRVALARALAVEPQVLLLDEPFGALDAKVRKELRSWLRKLHDEV-HVTTVFVTHDQEEAMEVADRIVVMSNGKI 209 (237)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhc-CCEEEEEeCCHHHHHhhcCEEEEEECCEE
Confidence 99999999999999999999999999999999999999999999886532 44555577888889999999999999999
Q ss_pred EEecChhhHH
Q 000997 387 VYQGPRVSVL 396 (1194)
Q Consensus 387 v~~G~~~~~~ 396 (1194)
++.|+.+++.
T Consensus 210 ~~~~~~~~~~ 219 (237)
T TIGR00968 210 EQIGSPDEVY 219 (237)
T ss_pred EEecCHHHHH
Confidence 9999987764
No 449
>cd03262 ABC_HisP_GlnQ_permeases HisP and GlnQ are the ATP-binding components of the bacterial periplasmic histidine and glutamine permeases, repectively. Histidine permease is a multisubunit complex containing the HisQ and HisM integral membrane subunits and two copies of HisP. HisP has properties intermediate between those of integral and peripheral membrane proteins and is accessible from both sides of the membrane, presumably by its interaction with HisQ and HisM. The two HisP subunits form a homodimer within the complex. The domain structure of the amino acid uptake systems is typical for prokaryote extracellular solute binding protein-dependent uptake systems. All of the amino acid uptake systems also have at least one, and in a few cases, two extracellular solute binding proteins located in the periplasm of Gram-negative bacteria, or attached to the cell membrane of Gram-positive bacteria. The best-studied member of the PAAT (polar amino acid transport) family is the HisJQM
Probab=100.00 E-value=4.2e-34 Score=310.36 Aligned_cols=195 Identities=24% Similarity=0.351 Sum_probs=162.4
Q ss_pred eeeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCceeeEEEECCccCCCC-----CCCceEEEEecCCCCCC
Q 000997 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEF-----VPPRTSAYVSQQDWQVA 222 (1194)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~-----~~~~~~~yv~Q~d~~~~ 222 (1194)
.++|+++|++++||++++|+|||||||||||++|+|.+++. +|+|.++|.++... ..++.++|++|++.+++
T Consensus 13 ~~~l~~~s~~i~~G~~~~l~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~~~ 89 (213)
T cd03262 13 FHVLKGIDLTVKKGEVVVIIGPSGSGKSTLLRCINLLEEPD---SGTIIIDGLKLTDDKKNINELRQKVGMVFQQFNLFP 89 (213)
T ss_pred eEeecCceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEECCccchhHHHHHhcceEEecccccCC
Confidence 36999999999999999999999999999999999998776 99999999876421 12467999999998899
Q ss_pred CCCHHHHHHHhhh-ccCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhccCcchhHHHHHHHHHhCCcccccccccC
Q 000997 223 EMTVRETLDFAGQ-CQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGD 301 (1194)
Q Consensus 223 ~lTV~E~l~f~~~-~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~k~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 301 (1194)
.+||+||+.++.. .++.. . .+....++.+++.+||++..++.+
T Consensus 90 ~~t~~e~l~~~~~~~~~~~------~----------------------------~~~~~~~~~~l~~~~l~~~~~~~~-- 133 (213)
T cd03262 90 HLTVLENITLAPIKVKGMS------K----------------------------AEAEERALELLEKVGLADKADAYP-- 133 (213)
T ss_pred CCcHHHHHHhHHHHhcCCC------H----------------------------HHHHHHHHHHHHHcCCHhHhhhCc--
Confidence 9999999987532 11100 0 001223677888999987766655
Q ss_pred ccCCCCChhhhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEE
Q 000997 302 EMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILL 381 (1194)
Q Consensus 302 ~~~~~LSGGqkqRvsia~al~~~~~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL 381 (1194)
..|||||||||+||+||+.+|++++|||||+|||+.+...+.+.|+++++ . +++|+.++|+..++.+++|+|++|
T Consensus 134 ---~~LS~G~~qrv~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~-~-~~tvi~~sh~~~~~~~~~d~i~~l 208 (213)
T cd03262 134 ---AQLSGGQQQRVAIARALAMNPKVMLFDEPTSALDPELVGEVLDVMKDLAE-E-GMTMVVVTHEMGFAREVADRVIFM 208 (213)
T ss_pred ---cccCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHH-c-CCEEEEEeCCHHHHHHhCCEEEEE
Confidence 46999999999999999999999999999999999999999999999875 2 445666889999999999999999
Q ss_pred cCCeE
Q 000997 382 SEGQI 386 (1194)
Q Consensus 382 ~~G~i 386 (1194)
++|++
T Consensus 209 ~~g~i 213 (213)
T cd03262 209 DDGRI 213 (213)
T ss_pred eCCcC
Confidence 99974
No 450
>cd03251 ABCC_MsbA MsbA is an essential ABC transporter, closely related to eukaryotic MDR proteins. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.3e-34 Score=317.06 Aligned_cols=195 Identities=27% Similarity=0.378 Sum_probs=155.9
Q ss_pred EEeeeeeEEEeCCcEEEEEccCCCChHHHHhhhcCCCCCCeeEEEEEEcCccCCh---hcccceeeEeecCCCCCCCCcH
Q 000997 843 QLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ---ETFARISGYCEQNDIHSPGLTV 919 (1194)
Q Consensus 843 ~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~---~~~~~~~gyv~Q~~~~~~~lTv 919 (1194)
.+|+|+||++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+... ...++.++|++|++.+++ .|+
T Consensus 16 ~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~-~tv 92 (234)
T cd03251 16 PVLRDISLDIPAGETVALVGPSGSGKSTLVNLIPRFYD--VDSGRILIDGHDVRDYTLASLRRQIGLVSQDVFLFN-DTV 92 (234)
T ss_pred cceeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhcccc--CCCCEEEECCEEhhhCCHHHHHhhEEEeCCCCeecc-ccH
Confidence 69999999999999999999999999999999999876 468999999986532 334567999999988776 699
Q ss_pred HHHHHHHhhhcCCCcCcHHHH-----HHHHHHHHHHc--CCCcccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEE
Q 000997 920 LESLLFSAWLRLPSEIELETQ-----RAFVEEVMELV--ELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFM 992 (1194)
Q Consensus 920 ~e~l~f~~~lr~~~~~~~~~~-----~~~v~~~l~~l--~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illL 992 (1194)
+||+.+.... ...... ...+++.++.+ ++....+.. +..||+|||||++||++|+.+|++|+|
T Consensus 93 ~enl~~~~~~-----~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~-----~~~LS~G~~qrv~la~al~~~p~lllL 162 (234)
T cd03251 93 AENIAYGRPG-----ATREEVEEAARAANAHEFIMELPEGYDTVIGER-----GVKLSGGQRQRIAIARALLKDPPILIL 162 (234)
T ss_pred HHHhhccCCC-----CCHHHHHHHHHHcCcHHHHHhcccCcceeeccC-----CCcCCHHHHHHHHHHHHHhcCCCEEEE
Confidence 9999875321 111111 11223444444 344333322 468999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCeEEEEccCcEEEEeCCC
Q 000997 993 DEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1194)
Q Consensus 993 DEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~ 1054 (1194)
||||+|||+.+...+.+.|+++. +|.|||++||+++ .+ +.||++++|.+ |+++..|+.
T Consensus 163 DEP~~~LD~~~~~~l~~~l~~~~-~~~tii~~sh~~~-~~-~~~d~v~~l~~-G~i~~~~~~ 220 (234)
T cd03251 163 DEATSALDTESERLVQAALERLM-KNRTTFVIAHRLS-TI-ENADRIVVLED-GKIVERGTH 220 (234)
T ss_pred eCccccCCHHHHHHHHHHHHHhc-CCCEEEEEecCHH-HH-hhCCEEEEecC-CeEeeeCCH
Confidence 99999999999999999999986 4899999999986 34 45999999985 788888764
No 451
>TIGR02323 CP_lyasePhnK phosphonate C-P lyase system protein PhnK. Members of this family are the PhnK protein of C-P lyase systems for utilization of phosphonates. These systems resemble phosphonatase-based systems in having a three component ABC transporter, where TIGR01097 is the permease, TIGR01098 is the phosphonates binding protein, and TIGR02315 is the ATP-binding cassette (ABC) protein. They differ, however, in having, typically, ten or more additional genes, many of which are believed to form a membrane-associated complex. This protein (PhnK) and the adjacent-encoded PhnL resemble transporter ATP-binding proteins but are suggested, based on mutatgenesis studies, to be part of this complex rather than part of a transporter per se.
Probab=100.00 E-value=9.8e-34 Score=315.71 Aligned_cols=203 Identities=27% Similarity=0.304 Sum_probs=163.5
Q ss_pred ceEEeeeeeEEEeCCcEEEEEccCCCChHHHHhhhcCCCCCCeeEEEEEEcCcc-----CCh---h----cccceeeEee
Q 000997 841 RLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYP-----KRQ---E----TFARISGYCE 908 (1194)
Q Consensus 841 ~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~-----~~~---~----~~~~~~gyv~ 908 (1194)
...+|+|+|+++++|++++|+||||||||||+++|+|..+ +.+|+|.++|.+ +.. . ..++.++|++
T Consensus 15 ~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 92 (253)
T TIGR02323 15 GGKGCRDVSFDLYPGEVLGIVGESGSGKSTLLGCLAGRLA--PDHGTATYIMRSGAELELYQLSEAERRRLMRTEWGFVH 92 (253)
T ss_pred CceEeecceEEEeCCcEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEEecccccccccccCCHHHHHHhhhcceEEEE
Confidence 3468999999999999999999999999999999999876 468999999976 321 1 1235689999
Q ss_pred cCCC--CCCCCcHHHHHHHHhhhcCCCcCcHHHHHHHHHHHHHHcCCCc-ccCCcccCCCCCCCCHHHHHHHHHHHHHhh
Q 000997 909 QNDI--HSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTS-LSGALIGLPGINGLSTEQRKRLTIAVELVA 985 (1194)
Q Consensus 909 Q~~~--~~~~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~-~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~ 985 (1194)
|++. +.+.+|+.||+.+..... .. .......+.++++++.+++.+ ..+.. +..|||||||||+|||||+.
T Consensus 93 q~~~~~~~~~~~~~~~i~~~~~~~-~~-~~~~~~~~~~~~~l~~l~l~~~~~~~~-----~~~LSgG~~qrv~laral~~ 165 (253)
T TIGR02323 93 QNPRDGLRMRVSAGANIGERLMAI-GA-RHYGNIRAAAHDWLEEVEIDPTRIDDL-----PRAFSGGMQQRLQIARNLVT 165 (253)
T ss_pred eCcccccCccccHHHHHHHHHHHh-cc-cchHHHHHHHHHHHHHcCCChhhhhcC-----chhcCHHHHHHHHHHHHHhc
Confidence 9974 346679999987542211 10 011223456788999999863 44443 35799999999999999999
Q ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCeEEEEccCcEEEEeCCC
Q 000997 986 NPSIVFMDEPTSGLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1194)
Q Consensus 986 ~p~illLDEPTsgLD~~~~~~i~~~l~~l~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~ 1054 (1194)
+|++|+|||||+|||+.++..+.+.|+++.++ |.|||+++|++. .+.+.+|++++|+ +|++++.|+.
T Consensus 166 ~p~vlllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~vsH~~~-~~~~~~d~~~~l~-~G~i~~~~~~ 233 (253)
T TIGR02323 166 RPRLVFMDEPTGGLDVSVQARLLDLLRGLVRDLGLAVIIVTHDLG-VARLLAQRLLVMQ-QGRVVESGLT 233 (253)
T ss_pred CCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhcCEEEEEE-CCEEEEECCH
Confidence 99999999999999999999999999998754 899999999976 4666899999998 4789988874
No 452
>PRK14256 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.6e-33 Score=313.60 Aligned_cols=212 Identities=20% Similarity=0.254 Sum_probs=168.8
Q ss_pred eeeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHhcCcC--CCCceeeEEEECCccCCCC-----CCCceEEEEecCCCC
Q 000997 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLG--HHLQVSGKITYNGHGFKEF-----VPPRTSAYVSQQDWQ 220 (1194)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~--~~~~~~G~i~~~G~~~~~~-----~~~~~~~yv~Q~d~~ 220 (1194)
..+|+|+|+.|++||+++|+|||||||||||++|+|.++ +..+.+|+|.++|.++... ..++.++|++|++.+
T Consensus 17 ~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~i~~~~~~~~~~~~~i~~~~q~~~~ 96 (252)
T PRK14256 17 NHAVKDVSMDFPENSVTAIIGPSGCGKSTVLRSINRMHDLVPSARVTGKILLDDTDIYDRGVDPVSIRRRVGMVFQKPNP 96 (252)
T ss_pred eeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHHhcccCCCCCCCceEEEECCEEcccccCChHHhhccEEEEecCCCC
Confidence 359999999999999999999999999999999999975 3213489999999887432 224679999999998
Q ss_pred CCCCCHHHHHHHhhhccCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhccCcchhHHHHHHHHHhCCccccccccc
Q 000997 221 VAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVG 300 (1194)
Q Consensus 221 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~k~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg 300 (1194)
++.+||+||+.+..+..+... . . +....++.+++.+||........
T Consensus 97 ~~~~tv~enl~~~~~~~~~~~-~------------------~--------------~~~~~~~~~l~~~~l~~~~~~~~- 142 (252)
T PRK14256 97 FPAMSIYDNVIAGYKLNGRVN-R------------------S--------------EADEIVESSLKRVALWDEVKDRL- 142 (252)
T ss_pred CCcCcHHHHHHhHHHhcCCCC-H------------------H--------------HHHHHHHHHHHHcCCchhhhHHh-
Confidence 999999999987543211000 0 0 00123677788888854211111
Q ss_pred CccCCCCChhhhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEE
Q 000997 301 DEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVIL 380 (1194)
Q Consensus 301 ~~~~~~LSGGqkqRvsia~al~~~~~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vil 380 (1194)
+..+..|||||||||+||+||+.+|++++|||||+|||+.++.++.+.|+++++ + ++|+.++|..+++.++||++++
T Consensus 143 ~~~~~~LS~G~~qrl~laral~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~--~-~tiiivsH~~~~~~~~~d~i~~ 219 (252)
T PRK14256 143 KSNAMELSGGQQQRLCIARTIAVKPEVILMDEPASALDPISTLKIEELIEELKE--K-YTIIIVTHNMQQAARVSDYTAF 219 (252)
T ss_pred hCCcCcCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHh--C-CcEEEEECCHHHHHhhCCEEEE
Confidence 123457999999999999999999999999999999999999999999999864 3 4666688889999999999999
Q ss_pred EcCCeEEEecChhhHH
Q 000997 381 LSEGQIVYQGPRVSVL 396 (1194)
Q Consensus 381 L~~G~iv~~G~~~~~~ 396 (1194)
|++|+++..|+.+++.
T Consensus 220 l~~G~i~~~~~~~~~~ 235 (252)
T PRK14256 220 FYMGDLVECGETKKIF 235 (252)
T ss_pred EECCEEEEeCCHHHHH
Confidence 9999999999987763
No 453
>PRK13539 cytochrome c biogenesis protein CcmA; Provisional
Probab=100.00 E-value=4.9e-34 Score=307.94 Aligned_cols=187 Identities=28% Similarity=0.359 Sum_probs=157.1
Q ss_pred cceEEeeeeeEEEeCCcEEEEEccCCCChHHHHhhhcCCCCCCeeEEEEEEcCccCChhcccceeeEeecCCCCCCCCcH
Q 000997 840 DRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQETFARISGYCEQNDIHSPGLTV 919 (1194)
Q Consensus 840 ~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~~~~~~~gyv~Q~~~~~~~lTv 919 (1194)
+++.+|+|+||+|++||++||+||||||||||+++|+|... +.+|+|.++|.+.....+++.++|++|++.+++.+|+
T Consensus 13 ~~~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~~~~~~~~~~~~~~~~~~~~~tv 90 (207)
T PRK13539 13 GGRVLFSGLSFTLAAGEALVLTGPNGSGKTTLLRLIAGLLP--PAAGTIKLDGGDIDDPDVAEACHYLGHRNAMKPALTV 90 (207)
T ss_pred CCeEEEeceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEeCcchhhHhhcEEecCCCcCCCCCcH
Confidence 34579999999999999999999999999999999999866 4689999999875322256678999999888889999
Q ss_pred HHHHHHHhhhcCCCcCcHHHHHHHHHHHHHHcCCCcccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCC
Q 000997 920 LESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSGL 999 (1194)
Q Consensus 920 ~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEPTsgL 999 (1194)
+||+.+....+. .. .+.++++++.+++.+..+... ..||||||||++||++|+.+|++|+|||||+||
T Consensus 91 ~~~l~~~~~~~~---~~----~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrl~la~al~~~p~llllDEPt~~L 158 (207)
T PRK13539 91 AENLEFWAAFLG---GE----ELDIAAALEAVGLAPLAHLPF-----GYLSAGQKRRVALARLLVSNRPIWILDEPTAAL 158 (207)
T ss_pred HHHHHHHHHhcC---Cc----HHHHHHHHHHcCCHHHHcCCh-----hhcCHHHHHHHHHHHHHhcCCCEEEEeCCcccC
Confidence 999987543321 11 134788999999977655443 579999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCeEEEEc
Q 000997 1000 DARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMK 1043 (1194)
Q Consensus 1000 D~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~~d~~~~l~ 1043 (1194)
|+.+...+++.|++++++|+|||+++|++. ++ .. |+++.+.
T Consensus 159 D~~~~~~l~~~l~~~~~~~~tiii~sH~~~-~~-~~-~~~~~~~ 199 (207)
T PRK13539 159 DAAAVALFAELIRAHLAQGGIVIAATHIPL-GL-PG-ARELDLG 199 (207)
T ss_pred CHHHHHHHHHHHHHHHHCCCEEEEEeCCch-hh-cc-CcEEeec
Confidence 999999999999998878999999999975 33 33 8887774
No 454
>cd03229 ABC_Class3 This class is comprised of all BPD (Binding Protein Dependent) systems that are largely represented in archaea and eubacteria and are primarily involved in scavenging solutes from the environment. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=4.5e-34 Score=300.73 Aligned_cols=160 Identities=30% Similarity=0.447 Sum_probs=143.1
Q ss_pred ceEEeeeeeEEEeCCcEEEEEccCCCChHHHHhhhcCCCCCCeeEEEEEEcCccCCh-----hcccceeeEeecCCCCCC
Q 000997 841 RLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ-----ETFARISGYCEQNDIHSP 915 (1194)
Q Consensus 841 ~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~-----~~~~~~~gyv~Q~~~~~~ 915 (1194)
++.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++.. ..+++.++|++|++.+++
T Consensus 12 ~~~~l~~i~~~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~~~ 89 (178)
T cd03229 12 QKTVLNDVSLNIEAGEIVALLGPSGSGKSTLLRCIAGLEE--PDSGSILIDGEDLTDLEDELPPLRRRIGMVFQDFALFP 89 (178)
T ss_pred CeEEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEEccccchhHHHHhhcEEEEecCCccCC
Confidence 3579999999999999999999999999999999999876 468999999987532 345678999999998888
Q ss_pred CCcHHHHHHHHhhhcCCCcCcHHHHHHHHHHHHHHcCCCcccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCC
Q 000997 916 GLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEP 995 (1194)
Q Consensus 916 ~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEP 995 (1194)
.+|++|++.+. ||+|||||++||++|+.+|++++||||
T Consensus 90 ~~t~~~~l~~~------------------------------------------lS~G~~qr~~la~al~~~p~llilDEP 127 (178)
T cd03229 90 HLTVLENIALG------------------------------------------LSGGQQQRVALARALAMDPDVLLLDEP 127 (178)
T ss_pred CCCHHHheeec------------------------------------------CCHHHHHHHHHHHHHHCCCCEEEEeCC
Confidence 89999987531 899999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCeEEEEccC
Q 000997 996 TSGLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRG 1045 (1194)
Q Consensus 996 TsgLD~~~~~~i~~~l~~l~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~g 1045 (1194)
|+|||+.++..+.+.|++++++ |+|+|+++|++. .+.+.+|++++|++|
T Consensus 128 ~~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~g 177 (178)
T cd03229 128 TSALDPITRREVRALLKSLQAQLGITVVLVTHDLD-EAARLADRVVVLRDG 177 (178)
T ss_pred cccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhcCEEEEEeCC
Confidence 9999999999999999999877 899999999976 465689999999853
No 455
>PRK09580 sufC cysteine desulfurase ATPase component; Reviewed
Probab=100.00 E-value=1.4e-33 Score=313.59 Aligned_cols=208 Identities=25% Similarity=0.313 Sum_probs=162.0
Q ss_pred ceEEeeeeeEEEeCCcEEEEEccCCCChHHHHhhhcCCCCCCeeEEEEEEcCccCCh---hc-ccceeeEeecCCCCCCC
Q 000997 841 RLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ---ET-FARISGYCEQNDIHSPG 916 (1194)
Q Consensus 841 ~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~---~~-~~~~~gyv~Q~~~~~~~ 916 (1194)
++.+|+|+|++|++|+++||+||||||||||+++|+|.....+.+|+|.++|.++.. .. .++.++|++|++.+++.
T Consensus 13 ~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~ 92 (248)
T PRK09580 13 DKAILRGLNLEVRPGEVHAIMGPNGSGKSTLSATLAGREDYEVTGGTVEFKGKDLLELSPEDRAGEGIFMAFQYPVEIPG 92 (248)
T ss_pred CeeeeecceeEEcCCCEEEEECCCCCCHHHHHHHHcCCccCCCCceEEEECCCccccCCHHHHhhcceEEEecCchhccc
Confidence 456999999999999999999999999999999999984211468999999987532 11 23468999999988888
Q ss_pred CcHHHHHHHHhh-hcC--CCc-CcHHHHHHHHHHHHHHcCCC-cccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCEEE
Q 000997 917 LTVLESLLFSAW-LRL--PSE-IELETQRAFVEEVMELVELT-SLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVF 991 (1194)
Q Consensus 917 lTv~e~l~f~~~-lr~--~~~-~~~~~~~~~v~~~l~~l~l~-~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~ill 991 (1194)
+|+.+++.+... ++. ... .......+.++++++.+++. +..+..+ ...|||||||||+|||||+.+|+||+
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~----~~~LS~G~~qrv~laral~~~p~ill 168 (248)
T PRK09580 93 VSNQFFLQTALNAVRSYRGQEPLDRFDFQDLMEEKIALLKMPEDLLTRSV----NVGFSGGEKKRNDILQMAVLEPELCI 168 (248)
T ss_pred hhHHHHHHHhhhhhhcccccccchHHHHHHHHHHHHHHcCCChhhcccCC----CCCCCHHHHHHHHHHHHHHcCCCEEE
Confidence 887776543211 110 000 11122345677888888884 3444322 13699999999999999999999999
Q ss_pred EeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHh-cCeEEEEccCcEEEEeCCC
Q 000997 992 MDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFES-FDELLFMKRGGELIYAGPL 1054 (1194)
Q Consensus 992 LDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~-~d~~~~l~~gG~~~~~g~~ 1054 (1194)
|||||+|||+.++..+.+.|+++++.|+|||++||+++. +... +|++++|. +|++++.|+.
T Consensus 169 LDEPt~~LD~~~~~~l~~~l~~l~~~~~tiii~sH~~~~-~~~~~~d~i~~l~-~g~i~~~g~~ 230 (248)
T PRK09580 169 LDESDSGLDIDALKIVADGVNSLRDGKRSFIIVTHYQRI-LDYIKPDYVHVLY-QGRIVKSGDF 230 (248)
T ss_pred EeCCCccCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHH-HHhhhCCEEEEEE-CCeEEEeCCH
Confidence 999999999999999999999998778999999999763 4444 79999997 5789998875
No 456
>cd03245 ABCC_bacteriocin_exporters ABC-type bacteriocin exporters. Many non-lantibiotic bacteriocins of lactic acid bacteria are produced as precursors which have N-terminal leader peptides that share similarities in amino acid sequence and contain a conserved processing site of two glycine residues in positions -1 and -2. A dedicated ATP-binding cassette (ABC) transporter is responsible for the proteolytic cleavage of the leader peptides and subsequent translocation of the bacteriocins across the cytoplasmic membrane.
Probab=100.00 E-value=4e-34 Score=312.13 Aligned_cols=195 Identities=27% Similarity=0.436 Sum_probs=158.8
Q ss_pred eEEeeeeeEEEeCCcEEEEEccCCCChHHHHhhhcCCCCCCeeEEEEEEcCccCCh---hcccceeeEeecCCCCCCCCc
Q 000997 842 LQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ---ETFARISGYCEQNDIHSPGLT 918 (1194)
Q Consensus 842 ~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~---~~~~~~~gyv~Q~~~~~~~lT 918 (1194)
+.+|+|+|+++++|++++|+||||||||||+++|+|..+ +.+|+|.++|.++.. ...++.++|++|++.+++ .|
T Consensus 17 ~~~l~~i~~~i~~G~~~~i~G~nGsGKSTLl~~i~G~~~--~~~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~-~t 93 (220)
T cd03245 17 IPALDNVSLTIRAGEKVAIIGRVGSGKSTLLKLLAGLYK--PTSGSVLLDGTDIRQLDPADLRRNIGYVPQDVTLFY-GT 93 (220)
T ss_pred cccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcC--CCCCeEEECCEEhHHCCHHHHHhhEEEeCCCCcccc-ch
Confidence 469999999999999999999999999999999999875 458999999987532 234567999999988776 69
Q ss_pred HHHHHHHHhhhcCCCcCcHHHHHHHHHHHHHHcCCCcccCCccc------CCCCCCCCHHHHHHHHHHHHHhhCCCEEEE
Q 000997 919 VLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIG------LPGINGLSTEQRKRLTIAVELVANPSIVFM 992 (1194)
Q Consensus 919 v~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~------~~~~~~LSgGqrqrl~ia~aL~~~p~illL 992 (1194)
+.|++.+.... .. ...+.++++.+++.+..+.... ...+..||||||||++||++|+.+|++|+|
T Consensus 94 v~e~l~~~~~~-----~~----~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~LSgG~~qrl~la~al~~~p~llll 164 (220)
T cd03245 94 LRDNITLGAPL-----AD----DERILRAAELAGVTDFVNKHPNGLDLQIGERGRGLSGGQRQAVALARALLNDPPILLL 164 (220)
T ss_pred HHHHhhcCCCC-----CC----HHHHHHHHHHcCcHHHHHhccccccceecCCCccCCHHHHHHHHHHHHHhcCCCEEEE
Confidence 99999764211 11 1235677788888766554321 112358999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCeEEEEccCcEEEEeC
Q 000997 993 DEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAG 1052 (1194)
Q Consensus 993 DEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g 1052 (1194)
||||+|||+.++..+++.|++++++ .|||++||+++. .+.+|++++|.+ |++++.|
T Consensus 165 DEPt~~LD~~~~~~l~~~l~~~~~~-~tii~~sH~~~~--~~~~d~v~~l~~-g~i~~~~ 220 (220)
T cd03245 165 DEPTSAMDMNSEERLKERLRQLLGD-KTLIIITHRPSL--LDLVDRIIVMDS-GRIVADG 220 (220)
T ss_pred eCccccCCHHHHHHHHHHHHHhcCC-CEEEEEeCCHHH--HHhCCEEEEEeC-CeEeecC
Confidence 9999999999999999999998754 899999999763 478999999985 7777654
No 457
>TIGR01189 ccmA heme ABC exporter, ATP-binding protein CcmA. This model describes the cyt c biogenesis protein encoded by ccmA in bacteria. An exception is, an arabidopsis protein. Quite likely this is encoded by an organelle. Bacterial c-type cytocromes are located on the periplasmic side of the cytoplasmic membrane. Several gene products encoded in a locus designated as 'ccm' are implicated in the transport and assembly of the functional cytochrome C. This cluster includes genes: ccmA;B;C;D;E;F;G and H. The posttranslational pathway includes the transport of heme moiety, the secretion of the apoprotein and the covalent attachment of the heme with the apoprotein. The proteins ccmA and B represent an ABC transporter; ccmC and D participate in heme transfer to ccmE, which function as a periplasmic heme chaperone. The presence of ccmF, G and H is suggested to be obligatory for the final functional assembly of cytochrome c.
Probab=100.00 E-value=6.9e-34 Score=304.79 Aligned_cols=185 Identities=25% Similarity=0.305 Sum_probs=155.2
Q ss_pred cceEEeeeeeEEEeCCcEEEEEccCCCChHHHHhhhcCCCCCCeeEEEEEEcCccCCh--hcccceeeEeecCCCCCCCC
Q 000997 840 DRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ--ETFARISGYCEQNDIHSPGL 917 (1194)
Q Consensus 840 ~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~--~~~~~~~gyv~Q~~~~~~~l 917 (1194)
+++.+|+|+|+++++||++||+||||||||||+++|+|..+ +.+|+|.++|.++.. ..+++.++|++|++.+++.+
T Consensus 11 ~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~~~~~~~~~i~~~~q~~~~~~~~ 88 (198)
T TIGR01189 11 GERMLFEGLSFTLNAGEALQVTGPNGIGKTTLLRILAGLLR--PDSGEVRWNGTALAEQRDEPHRNILYLGHLPGLKPEL 88 (198)
T ss_pred CCEEEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCccEEEECCEEcccchHHhhhheEEeccCcccccCC
Confidence 34679999999999999999999999999999999999876 468999999987532 23456789999998888889
Q ss_pred cHHHHHHHHhhhcCCCcCcHHHHHHHHHHHHHHcCCCcccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCC
Q 000997 918 TVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTS 997 (1194)
Q Consensus 918 Tv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEPTs 997 (1194)
|+.||+.+....+.. + .+.++++++.+++.+..+..+ ..||||||||++||++|+.+|++|+|||||+
T Consensus 89 tv~~~l~~~~~~~~~-----~--~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrv~la~al~~~p~llllDEPt~ 156 (198)
T TIGR01189 89 SALENLHFWAAIHGG-----A--QRTIEDALAAVGLTGFEDLPA-----AQLSAGQQRRLALARLWLSRAPLWILDEPTT 156 (198)
T ss_pred cHHHHHHHHHHHcCC-----c--HHHHHHHHHHcCCHHHhcCCh-----hhcCHHHHHHHHHHHHHhcCCCEEEEeCCCc
Confidence 999999876433211 1 235678899999987766543 5799999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCeEEE
Q 000997 998 GLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLF 1041 (1194)
Q Consensus 998 gLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~~d~~~~ 1041 (1194)
|||+.+...+++.|++++++|.|||+++|++. ++ .+++++.
T Consensus 157 ~LD~~~~~~l~~~l~~~~~~~~tii~~sH~~~-~~--~~~~~~~ 197 (198)
T TIGR01189 157 ALDKAGVALLAGLLRAHLARGGIVLLTTHQDL-GL--VEARELR 197 (198)
T ss_pred CCCHHHHHHHHHHHHHHHhCCCEEEEEEcccc-cc--cceEEee
Confidence 99999999999999998778999999999975 22 3566654
No 458
>PRK14266 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.4e-33 Score=313.94 Aligned_cols=207 Identities=25% Similarity=0.317 Sum_probs=166.1
Q ss_pred ceEEeeeeeEEEeCCcEEEEEccCCCChHHHHhhhcCCCC--C-CeeEEEEEEcCccCCh-----hcccceeeEeecCCC
Q 000997 841 RLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKT--G-GIIEGDIYISGYPKRQ-----ETFARISGYCEQNDI 912 (1194)
Q Consensus 841 ~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~--~-~~~~G~i~i~g~~~~~-----~~~~~~~gyv~Q~~~ 912 (1194)
++.+|+|+|+++++||+++|+||||||||||+++|+|... + .+.+|+|.++|.++.. ...++.++|++|++.
T Consensus 15 ~~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~i~~~~~~~~~~~~~i~~~~q~~~ 94 (250)
T PRK14266 15 DAHILKNVNLDIPKNSVTALIGPSGCGKSTFIRTLNRMNDLIPGFRHEGHIYLDGVDIYDPAVDVVELRKKVGMVFQKPN 94 (250)
T ss_pred CeEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhhccCCCCCCccEEEECCEEcccccccHHHHhhheEEEecCCc
Confidence 4579999999999999999999999999999999999743 1 1258999999987632 234567999999998
Q ss_pred CCCCCcHHHHHHHHhhhcCCCcCcHHHHHHHHHHHHHHcCCCcccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEE
Q 000997 913 HSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFM 992 (1194)
Q Consensus 913 ~~~~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illL 992 (1194)
+++. |+.||+.+...... ........+.+.++++.+++.+....... ..+..||+|||||++|||+|+.+|+||+|
T Consensus 95 ~~~~-t~~~nl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~l~~~~~-~~~~~LS~Gq~qrv~laral~~~p~llll 170 (250)
T PRK14266 95 PFPK-SIFDNVAYGLRIHG--EDDEDFIEERVEESLKAAALWDEVKDKLD-KSALGLSGGQQQRLCIARTIAVSPEVILM 170 (250)
T ss_pred cCcc-hHHHHHHhHHhhcC--CCCHHHHHHHHHHHHHHcCCchhHHHHHh-CCcccCCHHHHHHHHHHHHHHcCCCEEEE
Confidence 8875 99999987643221 11223334567788888887542111111 12468999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCeEEEEccCcEEEEeCCC
Q 000997 993 DEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1194)
Q Consensus 993 DEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~ 1054 (1194)
||||+|||+.+...+.+.|++++ +|+|||+++|++. ++...+|++++|. +|++++.|+.
T Consensus 171 DEP~~gLD~~~~~~l~~~l~~~~-~~~tiii~sh~~~-~~~~~~~~i~~l~-~G~i~~~g~~ 229 (250)
T PRK14266 171 DEPCSALDPISTTKIEDLIHKLK-EDYTIVIVTHNMQ-QATRVSKYTSFFL-NGEIIESGLT 229 (250)
T ss_pred cCCCccCCHHHHHHHHHHHHHHh-cCCeEEEEECCHH-HHHhhcCEEEEEE-CCeEEEeCCH
Confidence 99999999999999999999985 4899999999986 5778899999997 4799998874
No 459
>PRK14264 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.8e-33 Score=320.77 Aligned_cols=221 Identities=23% Similarity=0.321 Sum_probs=171.1
Q ss_pred eeEeecceeeeecccccccccccccceEEeeeeeEEEeCCcEEEEEccCCCChHHHHhhhcCCCCC---CeeEEEEEEcC
Q 000997 816 SMAFGNINYFVDVPVELKQEGVLEDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTG---GIIEGDIYISG 892 (1194)
Q Consensus 816 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~---~~~~G~i~i~g 892 (1194)
.+.++|+++.+ +.+.+|+++||+|++||+++|+|+|||||||||++|+|.... .+.+|+|.++|
T Consensus 45 ~l~i~nl~~~~-------------~~~~iL~~is~~i~~Ge~~~IvG~nGsGKSTLl~~L~Gl~~~~~~~p~~G~I~i~g 111 (305)
T PRK14264 45 KLSVEDLDVYY-------------GDDHALKGVSMDIPEKSVTALIGPSGCGKSTFLRCLNRMNDRIKAARIDGSVELDG 111 (305)
T ss_pred eEEEEEEEEEe-------------CCeeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECC
Confidence 35666666544 335799999999999999999999999999999999997541 24689999999
Q ss_pred ccCCh-----hcccceeeEeecCCCCCCCCcHHHHHHHHhhhcCCC---------cCc-HHHHHHHHHHHHHHcCCCccc
Q 000997 893 YPKRQ-----ETFARISGYCEQNDIHSPGLTVLESLLFSAWLRLPS---------EIE-LETQRAFVEEVMELVELTSLS 957 (1194)
Q Consensus 893 ~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~e~l~f~~~lr~~~---------~~~-~~~~~~~v~~~l~~l~l~~~~ 957 (1194)
.++.. ...++.++|++|++.+++ .||+||+.+....+... ... .....+.++++++.+++.+..
T Consensus 112 ~~i~~~~~~~~~~~~~i~~v~q~~~l~~-~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~ 190 (305)
T PRK14264 112 QDIYQDGVNLVELRKRVGMVFQSPNPFP-KSIRENISYGPRKHGDINTGLLARLLGRDDKDAEDELVERSLRQAALWDEV 190 (305)
T ss_pred EEcccccccHHHHhhceEEEccCCcccc-ccHHHHHHhHHhhcccccccccccccccCchHHHHHHHHHHHHHcCCchhh
Confidence 87532 234567999999988777 49999999864321100 011 122345678888888874321
Q ss_pred CCcccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcC
Q 000997 958 GALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFD 1037 (1194)
Q Consensus 958 ~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~~d 1037 (1194)
..... ..+..||||||||++||+||+.+|+||||||||+|||+.++..+++.|+++++ +.|||+++|+++ .+.+.+|
T Consensus 191 ~~~~~-~~~~~LSgGq~qrv~LAraL~~~p~lLLLDEPtsgLD~~~~~~l~~~L~~~~~-~~tiiivtH~~~-~i~~~~d 267 (305)
T PRK14264 191 NDRLD-DNALGLSGGQQQRLCIARCLAVDPEVILMDEPASALDPIATSKIEDLIEELAE-EYTVVVVTHNMQ-QAARISD 267 (305)
T ss_pred hHHhc-CccccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhc-CCEEEEEEcCHH-HHHHhcC
Confidence 11111 12468999999999999999999999999999999999999999999999876 589999999986 4667899
Q ss_pred eEE-EEccCcEEEEeCCC
Q 000997 1038 ELL-FMKRGGELIYAGPL 1054 (1194)
Q Consensus 1038 ~~~-~l~~gG~~~~~g~~ 1054 (1194)
+++ +|. +|+++..|+.
T Consensus 268 ~i~~~l~-~G~i~~~g~~ 284 (305)
T PRK14264 268 QTAVFLT-GGELVEYDDT 284 (305)
T ss_pred EEEEEec-CCEEEEeCCH
Confidence 975 566 5899999875
No 460
>COG1132 MdlB ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]
Probab=100.00 E-value=3.3e-34 Score=355.77 Aligned_cols=211 Identities=27% Similarity=0.448 Sum_probs=174.9
Q ss_pred ceeEeecceeeeecccccccccccccceEEeeeeeEEEeCCcEEEEEccCCCChHHHHhhhcCCCCCCeeEEEEEEcCcc
Q 000997 815 LSMAFGNINYFVDVPVELKQEGVLEDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYP 894 (1194)
Q Consensus 815 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~ 894 (1194)
..+.|+|++|.++ +++++|+|+|++++|||++||+||||||||||+++|+|... +.+|+|.+||.+
T Consensus 327 ~~I~f~~vsf~y~------------~~~~vl~~is~~i~~Ge~vaiVG~sGsGKSTl~~LL~r~~~--~~~G~I~idg~d 392 (567)
T COG1132 327 GSIEFENVSFSYP------------GKKPVLKDISFSIEPGEKVAIVGPSGSGKSTLIKLLLRLYD--PTSGEILIDGID 392 (567)
T ss_pred CeEEEEEEEEEcC------------CCCccccCceEEEcCCCEEEEECCCCCCHHHHHHHHhccCC--CCCCeEEECCEe
Confidence 4588999988773 14689999999999999999999999999999999999876 468999999988
Q ss_pred CC---hhcccceeeEeecCCCCCCCCcHHHHHHHHhhhcCCCcCcHHHHHHHHHHHHHHcCC-------CcccCCcccCC
Q 000997 895 KR---QETFARISGYCEQNDIHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVEL-------TSLSGALIGLP 964 (1194)
Q Consensus 895 ~~---~~~~~~~~gyv~Q~~~~~~~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l-------~~~~~~~~~~~ 964 (1194)
++ ...+++.++||+|++.++. -|++||+.++. + +.+.+ .++++++..++ .+-.|+.+|..
T Consensus 393 I~~i~~~~lr~~I~~V~Qd~~LF~-~TI~~NI~~g~----~-~at~e----ei~~a~k~a~~~d~I~~lp~g~dt~vge~ 462 (567)
T COG1132 393 IRDISLDSLRKRIGIVSQDPLLFS-GTIRENIALGR----P-DATDE----EIEEALKLANAHEFIANLPDGYDTIVGER 462 (567)
T ss_pred hhhcCHHHHHHhccEEcccceeec-ccHHHHHhcCC----C-CCCHH----HHHHHHHHhChHHHHHhCcccccceecCC
Confidence 64 4567889999999999987 69999999863 1 12222 23444444333 22456777743
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCeEEEEcc
Q 000997 965 GINGLSTEQRKRLTIAVELVANPSIVFMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKR 1044 (1194)
Q Consensus 965 ~~~~LSgGqrqrl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~ 1044 (1194)
+..||||||||++||||++++|+||+||||||+||+.+...|++.++++. +|+|+|+++|+++ ..+.+|+|++|++
T Consensus 463 -G~~LSgGQrQrlaiARall~~~~ILILDEaTSalD~~tE~~I~~~l~~l~-~~rT~iiIaHRls--ti~~aD~IiVl~~ 538 (567)
T COG1132 463 -GVNLSGGQRQRLAIARALLRNPPILILDEATSALDTETEALIQDALKKLL-KGRTTLIIAHRLS--TIKNADRIIVLDN 538 (567)
T ss_pred -CccCCHHHHHHHHHHHHHhcCCCEEEEeccccccCHHhHHHHHHHHHHHh-cCCEEEEEeccHh--HHHhCCEEEEEEC
Confidence 46799999999999999999999999999999999999999999999876 6789999999985 4466999999985
Q ss_pred CcEEEEeCCC
Q 000997 1045 GGELIYAGPL 1054 (1194)
Q Consensus 1045 gG~~~~~g~~ 1054 (1194)
|+++..|+.
T Consensus 539 -G~i~e~G~h 547 (567)
T COG1132 539 -GRIVERGTH 547 (567)
T ss_pred -CEEEEecCH
Confidence 789999985
No 461
>PRK13546 teichoic acids export protein ATP-binding subunit; Provisional
Probab=100.00 E-value=4.2e-33 Score=310.46 Aligned_cols=194 Identities=21% Similarity=0.306 Sum_probs=164.0
Q ss_pred cceEEeeeeeEEEeCCcEEEEEccCCCChHHHHhhhcCCCCCCeeEEEEEEcCccCChhcccceeeEeecCCCCCCCCcH
Q 000997 840 DRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQETFARISGYCEQNDIHSPGLTV 919 (1194)
Q Consensus 840 ~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~~~~~~~gyv~Q~~~~~~~lTv 919 (1194)
..+.+|+|+|++++|||++||+||||||||||+++|+|..+ +.+|+|.++|. +++++|+..+.+.+|+
T Consensus 35 ~~~~il~~is~~i~~Ge~~~liG~NGsGKSTLlk~L~Gl~~--p~~G~I~~~g~----------~~~~~~~~~~~~~~tv 102 (264)
T PRK13546 35 KTFFALDDISLKAYEGDVIGLVGINGSGKSTLSNIIGGSLS--PTVGKVDRNGE----------VSVIAISAGLSGQLTG 102 (264)
T ss_pred CceEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCcC--CCceEEEECCE----------EeEEecccCCCCCCcH
Confidence 45689999999999999999999999999999999999876 46899999985 3577787777788999
Q ss_pred HHHHHHHhhhcCCCcCcHHHHHHHHHHHHHHcCCCcccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCC
Q 000997 920 LESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSGL 999 (1194)
Q Consensus 920 ~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEPTsgL 999 (1194)
+||+.+..... ....++..+.++++++.+++.+..+.. +..||+|||||++||++|+.+|+||+|||||+||
T Consensus 103 ~enl~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~Gq~qrv~Laral~~~p~iLlLDEPt~gL 174 (264)
T PRK13546 103 IENIEFKMLCM---GFKRKEIKAMTPKIIEFSELGEFIYQP-----VKKYSSGMRAKLGFSINITVNPDILVIDEALSVG 174 (264)
T ss_pred HHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCchhhcCC-----cccCCHHHHHHHHHHHHHhhCCCEEEEeCccccC
Confidence 99998754332 122334445567788888887766654 3589999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCeEEEEccCcEEEEeCCCC
Q 000997 1000 DARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLG 1055 (1194)
Q Consensus 1000 D~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~~ 1055 (1194)
|+.+...+++.|+++.+.|+|||+++|++. .+.+.+|++++|. +|+++..|+..
T Consensus 175 D~~~~~~l~~~L~~~~~~g~tiIiisH~~~-~i~~~~d~i~~l~-~G~i~~~g~~~ 228 (264)
T PRK13546 175 DQTFAQKCLDKIYEFKEQNKTIFFVSHNLG-QVRQFCTKIAWIE-GGKLKDYGELD 228 (264)
T ss_pred CHHHHHHHHHHHHHHHHCCCEEEEEcCCHH-HHHHHcCEEEEEE-CCEEEEeCCHH
Confidence 999999999999999777999999999975 4667899999998 57899888753
No 462
>PRK14259 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2e-33 Score=315.36 Aligned_cols=209 Identities=20% Similarity=0.288 Sum_probs=164.0
Q ss_pred eeeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCC--CceeeEEEECCccCCCC-----CCCceEEEEecCCCC
Q 000997 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHH--LQVSGKITYNGHGFKEF-----VPPRTSAYVSQQDWQ 220 (1194)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~--~~~~G~i~~~G~~~~~~-----~~~~~~~yv~Q~d~~ 220 (1194)
..+|+|+|++|++|++++|+|||||||||||++|+|.+++. .+.+|+|.++|.++... ..++.++|++|++.+
T Consensus 26 ~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~p~~G~v~~~g~~i~~~~~~~~~~~~~i~~v~q~~~l 105 (269)
T PRK14259 26 FEAVKNVFCDIPRGKVTALIGPSGCGKSTVLRSLNRMNDLIEGCSLKGRVLFDGTDLYDPRVDPVEVRRRIGMVFQQPNP 105 (269)
T ss_pred EEEEcceEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEcccccCCHHHHhhceEEEccCCcc
Confidence 35999999999999999999999999999999999987631 13499999999876421 123569999999988
Q ss_pred CCCCCHHHHHHHhhhccCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhccCcchhHHHHHHHHHhCCccccccccc
Q 000997 221 VAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVG 300 (1194)
Q Consensus 221 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~k~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg 300 (1194)
++ .||+||+.+.+...+.. + + ....++.+++.+++....+...
T Consensus 106 ~~-~tv~enl~~~~~~~~~~---~---~-----------------------------~~~~~~~~l~~~~l~~~l~~~~- 148 (269)
T PRK14259 106 FP-KSIYENIAFGARINGYT---G---D-----------------------------MDELVERSLRKAAVWDECKDKL- 148 (269)
T ss_pred ch-hhHHHHHhhhhhhcCCc---H---H-----------------------------HHHHHHHHHHHhCCcchhhhhh-
Confidence 87 49999998865432110 0 0 0112455667777642111111
Q ss_pred CccCCCCChhhhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEE
Q 000997 301 DEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVIL 380 (1194)
Q Consensus 301 ~~~~~~LSGGqkqRvsia~al~~~~~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vil 380 (1194)
+.....|||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|+++++ + ++|+.++|+..++.++||++++
T Consensus 149 ~~~~~~LS~G~~qrl~laral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~--~-~tiiivtH~~~~~~~~~d~i~~ 225 (269)
T PRK14259 149 NESGYSLSGGQQQRLCIARTIAIEPEVILMDEPCSALDPISTLKIEETMHELKK--N-FTIVIVTHNMQQAVRVSDMTAF 225 (269)
T ss_pred CCCcccCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhc--C-CEEEEEeCCHHHHHHhcCEEEE
Confidence 233457999999999999999999999999999999999999999999998853 3 5566688899999999999999
Q ss_pred EcC-----------CeEEEecChhhHH
Q 000997 381 LSE-----------GQIVYQGPRVSVL 396 (1194)
Q Consensus 381 L~~-----------G~iv~~G~~~~~~ 396 (1194)
|++ |++++.|+++++.
T Consensus 226 l~~~~~~~~~~g~~g~~~~~~~~~~~~ 252 (269)
T PRK14259 226 FNAEEVEGGSGGKVGYLVEFNETKKIF 252 (269)
T ss_pred EeccccccccccccceEEEeCCHHHHH
Confidence 996 6789999988874
No 463
>COG4148 ModC ABC-type molybdate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2e-34 Score=302.35 Aligned_cols=195 Identities=27% Similarity=0.415 Sum_probs=170.2
Q ss_pred cceEeEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCceeeEEEECCccCCCCC-------CCceEEEEecCCCCCCCCC
Q 000997 153 DLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV-------PPRTSAYVSQQDWQVAEMT 225 (1194)
Q Consensus 153 ~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~~-------~~~~~~yv~Q~d~~~~~lT 225 (1194)
++++..+.--+|||-|+||||||||+|+|+|+..|+ +|.|.+||..+.+.. .+|.+|||+|+..+||++|
T Consensus 16 ~a~~~~p~~GvTAlFG~SGsGKTslin~IaGL~rPd---eG~I~lngr~L~Ds~k~i~lp~~~RriGYVFQDARLFpH~t 92 (352)
T COG4148 16 DANFTLPARGITALFGPSGSGKTSLINMIAGLTRPD---EGRIELNGRVLVDAEKGIFLPPEKRRIGYVFQDARLFPHYT 92 (352)
T ss_pred EEeccCCCCceEEEecCCCCChhhHHHHHhccCCcc---ccEEEECCEEeecccCCcccChhhheeeeEeeccccccceE
Confidence 577777776899999999999999999999999987 999999997653321 2589999999999999999
Q ss_pred HHHHHHHhhhccCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhccCcchhHHHHHHHHHhCCcccccccccCccCC
Q 000997 226 VRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEMLK 305 (1194)
Q Consensus 226 V~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~k~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~ 305 (1194)
|+-||.|+...- .....|++...||+.|..+.. ..
T Consensus 93 VrgNL~YG~~~~----------------------------------------~~~~fd~iv~lLGI~hLL~R~-----P~ 127 (352)
T COG4148 93 VRGNLRYGMWKS----------------------------------------MRAQFDQLVALLGIEHLLDRY-----PG 127 (352)
T ss_pred Eecchhhhhccc----------------------------------------chHhHHHHHHHhCcHHHHhhC-----CC
Confidence 999999964321 011267889999999988754 45
Q ss_pred CCChhhhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEcCCe
Q 000997 306 GISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEGQ 385 (1194)
Q Consensus 306 ~LSGGqkqRvsia~al~~~~~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~~G~ 385 (1194)
.|||||||||+|||||++.|++|+||||.+.||-....+|+-+|.++.+.. +.-|+.++|...|+..++|+|++|++|+
T Consensus 128 ~LSGGEkQRVAIGRALLt~P~LLLmDEPLaSLD~~RK~EilpylERL~~e~-~IPIlYVSHS~~Ev~RLAd~vV~le~Gk 206 (352)
T COG4148 128 TLSGGEKQRVAIGRALLTAPELLLMDEPLASLDLPRKREILPYLERLRDEI-NIPILYVSHSLDEVLRLADRVVVLENGK 206 (352)
T ss_pred ccCcchhhHHHHHHHHhcCCCeeeecCchhhcccchhhHHHHHHHHHHHhc-CCCEEEEecCHHHHHhhhheEEEecCCe
Confidence 799999999999999999999999999999999999999999999998865 4556778999999999999999999999
Q ss_pred EEEecChhhHH
Q 000997 386 IVYQGPRVSVL 396 (1194)
Q Consensus 386 iv~~G~~~~~~ 396 (1194)
+...|+.+++.
T Consensus 207 V~A~g~~e~v~ 217 (352)
T COG4148 207 VKASGPLEEVW 217 (352)
T ss_pred EEecCcHHHHh
Confidence 99999998875
No 464
>KOG0056 consensus Heavy metal exporter HMT1, ABC superfamily [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.1e-34 Score=321.63 Aligned_cols=210 Identities=24% Similarity=0.386 Sum_probs=171.7
Q ss_pred cceeeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCceeeEEEECCccCCCCC---CCceEEEEecCCCCCC
Q 000997 146 SKLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV---PPRTSAYVSQQDWQVA 222 (1194)
Q Consensus 146 ~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~~---~~~~~~yv~Q~d~~~~ 222 (1194)
+.+++|+||||++.||+.++++||||+||||++++|-...+-+ +|.|+++|+++.... .++.+|.||||..+|.
T Consensus 549 p~k~vl~disF~v~pGktvAlVG~SGaGKSTimRlLfRffdv~---sGsI~iDgqdIrnvt~~SLRs~IGVVPQDtvLFN 625 (790)
T KOG0056|consen 549 PGKPVLSDISFTVQPGKTVALVGPSGAGKSTIMRLLFRFFDVN---SGSITIDGQDIRNVTQSSLRSSIGVVPQDTVLFN 625 (790)
T ss_pred CCCceeecceEEecCCcEEEEECCCCCchhHHHHHHHHHhhcc---CceEEEcCchHHHHHHHHHHHhcCcccCcceeec
Confidence 3457999999999999999999999999999999999888765 999999999986543 4678999999998776
Q ss_pred CCCHHHHHHHhhhccCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhccCcchhHHHHHHHHHhCCcccccccccCc
Q 000997 223 EMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDE 302 (1194)
Q Consensus 223 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~k~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~ 302 (1194)
+ |+..||.|+-. +...+.+.+++ ||+ ...| +++++++.++|+||++
T Consensus 626 d-TI~yNIryak~----~AsneevyaAA------------------kAA--------~IHd---rIl~fPegY~t~VGER 671 (790)
T KOG0056|consen 626 D-TILYNIRYAKP----SASNEEVYAAA------------------KAA--------QIHD---RILQFPEGYNTRVGER 671 (790)
T ss_pred c-eeeeheeecCC----CCChHHHHHHH------------------HHh--------hHHH---HHhcCchhhhhhhhhc
Confidence 5 99999988632 22122221111 111 1122 3678999999999998
Q ss_pred cCCCCChhhhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEc
Q 000997 303 MLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLS 382 (1194)
Q Consensus 303 ~~~~LSGGqkqRvsia~al~~~~~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~ 382 (1194)
+.+ |||||||||+|||+++..|.+++|||.||+||..+.++|..+|.+++. ++|+|+.- |..+ +.--+|.|++++
T Consensus 672 GLk-LSGGEKQRVAiARtiLK~P~iIlLDEATSALDT~tER~IQaaL~rlca--~RTtIVvA-HRLS-TivnAD~ILvi~ 746 (790)
T KOG0056|consen 672 GLK-LSGGEKQRVAIARTILKAPSIILLDEATSALDTNTERAIQAALARLCA--NRTTIVVA-HRLS-TIVNADLILVIS 746 (790)
T ss_pred ccc-cCCcchhhHHHHHHHhcCCcEEEEcchhhhcCCccHHHHHHHHHHHhc--CCceEEEe-eeeh-heecccEEEEEe
Confidence 885 999999999999999999999999999999999999999999999885 56777754 4333 344679999999
Q ss_pred CCeEEEecChhhHHH
Q 000997 383 EGQIVYQGPRVSVLD 397 (1194)
Q Consensus 383 ~G~iv~~G~~~~~~~ 397 (1194)
+|+|++.|.+++++.
T Consensus 747 ~G~IvErG~HeeLl~ 761 (790)
T KOG0056|consen 747 NGRIVERGRHEELLK 761 (790)
T ss_pred CCeEeecCcHHHHHh
Confidence 999999999999874
No 465
>PRK14241 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.9e-33 Score=314.07 Aligned_cols=207 Identities=24% Similarity=0.319 Sum_probs=167.6
Q ss_pred eeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCC--ceeeEEEECCccCCCC-----CCCceEEEEecCCCCC
Q 000997 149 TILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHL--QVSGKITYNGHGFKEF-----VPPRTSAYVSQQDWQV 221 (1194)
Q Consensus 149 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~--~~~G~i~~~G~~~~~~-----~~~~~~~yv~Q~d~~~ 221 (1194)
++|+|+|++|++|++++|+|||||||||||++|+|.+.+.. +.+|+|.++|.++... ..++.++|++|++.++
T Consensus 18 ~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~laGl~~~~~~~~~~G~I~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~~ 97 (258)
T PRK14241 18 HAVEDVNLNIEPRSVTAFIGPSGCGKSTVLRTLNRMHEVIPGARVEGEVLLDGEDLYGPGVDPVAVRRTIGMVFQRPNPF 97 (258)
T ss_pred eeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhccCCcccCCCcceEEEECCEeccccccChHHHhcceEEEccccccC
Confidence 59999999999999999999999999999999999986421 2599999999876421 1246799999999889
Q ss_pred CCCCHHHHHHHhhhccCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhccCcchhHHHHHHHHHhCCcc----cccc
Q 000997 222 AEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDT----CADT 297 (1194)
Q Consensus 222 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~k~~~~~~~~~~~~~~~~l~~lgL~~----~~dt 297 (1194)
+.+||+||+.++....+.... ......++.+++.+||.. ..++
T Consensus 98 ~~~tv~~nl~~~~~~~~~~~~---------------------------------~~~~~~~~~~l~~~~l~~~~~~~~~~ 144 (258)
T PRK14241 98 PTMSIRDNVVAGLKLNGVRNK---------------------------------KDLDELVEKSLRGANLWNEVKDRLDK 144 (258)
T ss_pred CCCcHHHHHHHHHHhcCCCCH---------------------------------HHHHHHHHHHHHHcCCchhhhhHhhC
Confidence 999999999876432210000 001123667788888842 3333
Q ss_pred cccCccCCCCChhhhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCe
Q 000997 298 LVGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDD 377 (1194)
Q Consensus 298 ~vg~~~~~~LSGGqkqRvsia~al~~~~~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~ 377 (1194)
.+..|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++++ + ++|+.++|+..++.+++|+
T Consensus 145 -----~~~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~--~-~tviivsH~~~~~~~~~d~ 216 (258)
T PRK14241 145 -----PGGGLSGGQQQRLCIARAIAVEPDVLLMDEPCSALDPISTLAIEDLINELKQ--D-YTIVIVTHNMQQAARVSDQ 216 (258)
T ss_pred -----CcccCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhc--C-CEEEEEecCHHHHHHhCCE
Confidence 3457999999999999999999999999999999999999999999999853 3 4566688889999999999
Q ss_pred EEEEc------CCeEEEecChhhHH
Q 000997 378 VILLS------EGQIVYQGPRVSVL 396 (1194)
Q Consensus 378 vilL~------~G~iv~~G~~~~~~ 396 (1194)
|++|+ +|++++.|+.+++.
T Consensus 217 i~~l~~~~~~~~g~i~~~~~~~~~~ 241 (258)
T PRK14241 217 TAFFNLEATGKPGRLVEIDDTEKIF 241 (258)
T ss_pred EEEEecccCCCCceEEecCCHHHHH
Confidence 99996 79999999987763
No 466
>TIGR01193 bacteriocin_ABC ABC-type bacteriocin transporter. This model describes ABC-type bacteriocin transporter. The amino terminal domain (pfam03412) processes the N-terminal leader peptide from the bacteriocin while C-terminal domains resemble ABC transporter membrane protein and ATP-binding cassette domain. In general, bacteriocins are agents which are responsible for killing or inhibiting the closely related species or even different strains of the same species. Bacteriocins are usually encoded by bacterial plasmids. Bacteriocins are named after the species and hence in literature one encounters various names e.g., leucocin from Leuconostic geldium; pedicocin from Pedicoccus acidilactici; sakacin from Lactobacillus sake etc.
Probab=100.00 E-value=7.1e-34 Score=361.47 Aligned_cols=207 Identities=28% Similarity=0.359 Sum_probs=165.3
Q ss_pred eeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCceeeEEEECCccCCCCCC---CceEEEEecCCCCCCCCC
Q 000997 149 TILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVP---PRTSAYVSQQDWQVAEMT 225 (1194)
Q Consensus 149 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~lT 225 (1194)
++|+|+|++|+||+.++|+||||||||||+++|+|.++|. +|+|++||.++.+... ++.++||+|++.+|. .|
T Consensus 488 ~iL~~isl~i~~G~~vaIvG~SGsGKSTLlklL~gl~~p~---~G~I~idg~~i~~~~~~~lr~~i~~v~Q~~~lf~-gT 563 (708)
T TIGR01193 488 NILSDISLTIKMNSKTTIVGMSGSGKSTLAKLLVGFFQAR---SGEILLNGFSLKDIDRHTLRQFINYLPQEPYIFS-GS 563 (708)
T ss_pred cceeceeEEECCCCEEEEECCCCCCHHHHHHHHhccCCCC---CcEEEECCEEHHHcCHHHHHHheEEEecCceehh-HH
Confidence 5999999999999999999999999999999999999886 9999999998876653 578999999998776 59
Q ss_pred HHHHHHHhhhccCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhccCcchhHHHHHHHHHhCCcccccccccCccCC
Q 000997 226 VRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEMLK 305 (1194)
Q Consensus 226 V~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~k~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~ 305 (1194)
|+|||.++.+. ....+.+.++++. +. .++.+ ..|+...||.||+. ..
T Consensus 564 I~eNi~l~~~~---~~~~~~i~~a~~~------------------a~---------l~~~i--~~lp~gldt~i~e~-G~ 610 (708)
T TIGR01193 564 ILENLLLGAKE---NVSQDEIWAACEI------------------AE---------IKDDI--ENMPLGYQTELSEE-GS 610 (708)
T ss_pred HHHHHhccCCC---CCCHHHHHHHHHH------------------hC---------CHHHH--HhcccccCcEecCC-CC
Confidence 99999885311 1111111111110 00 11111 24677889999975 46
Q ss_pred CCChhhhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEcCCe
Q 000997 306 GISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEGQ 385 (1194)
Q Consensus 306 ~LSGGqkqRvsia~al~~~~~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~~G~ 385 (1194)
+||||||||++||||++.+|++|+||||||+||+.+...+.+.|+++ .++|+ +.++|..+ +...+|+|++|++|+
T Consensus 611 ~LSgGQrQRialARall~~p~iliLDE~Ts~LD~~te~~i~~~L~~~---~~~T~-IiitHr~~-~~~~~D~i~~l~~G~ 685 (708)
T TIGR01193 611 SISGGQKQRIALARALLTDSKVLILDESTSNLDTITEKKIVNNLLNL---QDKTI-IFVAHRLS-VAKQSDKIIVLDHGK 685 (708)
T ss_pred CCCHHHHHHHHHHHHHhhCCCEEEEeCccccCCHHHHHHHHHHHHHh---cCCEE-EEEecchH-HHHcCCEEEEEECCE
Confidence 89999999999999999999999999999999999999999999874 24555 44556554 567899999999999
Q ss_pred EEEecChhhHHH
Q 000997 386 IVYQGPRVSVLD 397 (1194)
Q Consensus 386 iv~~G~~~~~~~ 397 (1194)
++..|+++++.+
T Consensus 686 i~~~G~~~~L~~ 697 (708)
T TIGR01193 686 IIEQGSHDELLD 697 (708)
T ss_pred EEEECCHHHHHh
Confidence 999999998864
No 467
>PRK14248 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.3e-33 Score=311.58 Aligned_cols=210 Identities=20% Similarity=0.261 Sum_probs=163.5
Q ss_pred eeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHhcCcC--CCCceeeEEEECCccCCCC-----CCCceEEEEecCCCCC
Q 000997 149 TILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLG--HHLQVSGKITYNGHGFKEF-----VPPRTSAYVSQQDWQV 221 (1194)
Q Consensus 149 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~--~~~~~~G~i~~~G~~~~~~-----~~~~~~~yv~Q~d~~~ 221 (1194)
++|+|+|+++++|++++|+|||||||||||++|+|.+. +..+.+|+|.++|.++... ..++.++|++|++.++
T Consensus 35 ~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~i~~v~q~~~~~ 114 (268)
T PRK14248 35 RAVNDISMDIEKHAVTALIGPSGCGKSTFLRSINRMNDLIPSARSEGEILYEGLNILDSNINVVNLRREIGMVFQKPNPF 114 (268)
T ss_pred eeeeceEEEEcCCCEEEEECCCCCCHHHHHHHHHhcccccCCCCCceEEEECCEEcccccccHHHHhccEEEEecCCccC
Confidence 59999999999999999999999999999999999764 2113489999999887532 1245799999999888
Q ss_pred CCCCHHHHHHHhhhccCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhccCcchhHHHHHHHHHhCCcccccccccC
Q 000997 222 AEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGD 301 (1194)
Q Consensus 222 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~k~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 301 (1194)
+. ||+||+.+.....+.. ... ..+..+..+++.+|+........ +
T Consensus 115 ~~-tv~enl~~~~~~~~~~--~~~-------------------------------~~~~~~~~~l~~~~l~~~~~~~~-~ 159 (268)
T PRK14248 115 PK-SIYNNITHALKYAGER--RKS-------------------------------VLDEIVEESLTKAALWDEVKDRL-H 159 (268)
T ss_pred cc-cHHHHHHHHHHhcCCC--cHH-------------------------------HHHHHHHHHHHHcCCCcchHHHH-h
Confidence 75 9999998754321100 000 00122455677777742110111 2
Q ss_pred ccCCCCChhhhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEE
Q 000997 302 EMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILL 381 (1194)
Q Consensus 302 ~~~~~LSGGqkqRvsia~al~~~~~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL 381 (1194)
..+..|||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|+++.+ + ++|+.++|+.+++.+++|+|++|
T Consensus 160 ~~~~~LSgGq~qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~--~-~tiii~tH~~~~~~~~~d~v~~l 236 (268)
T PRK14248 160 SSALSLSGGQQQRLCIARTLAMKPAVLLLDEPASALDPISNAKIEELITELKE--E-YSIIIVTHNMQQALRVSDRTAFF 236 (268)
T ss_pred cCcccCCHHHHHHHHHHHHHhCCCCEEEEcCCCcccCHHHHHHHHHHHHHHhc--C-CEEEEEEeCHHHHHHhCCEEEEE
Confidence 23457999999999999999999999999999999999999999999999853 3 45666788888999999999999
Q ss_pred cCCeEEEecChhhHH
Q 000997 382 SEGQIVYQGPRVSVL 396 (1194)
Q Consensus 382 ~~G~iv~~G~~~~~~ 396 (1194)
++|++++.|+.+++.
T Consensus 237 ~~G~i~~~~~~~~~~ 251 (268)
T PRK14248 237 LNGDLVEYDQTEQIF 251 (268)
T ss_pred ECCEEEEeCCHHHHH
Confidence 999999999987763
No 468
>cd03252 ABCC_Hemolysin The ABC-transporter hemolysin B is a central component of the secretion machinery that translocates the toxin, hemolysin A, in a Sec-independent fashion across both membranes of E. coli. The hemolysin A (HlyA) transport machinery is composed of the ATP-binding cassette (ABC) transporter HlyB located in the inner membrane, hemolysin D (HlyD), also anchored in the inner membrane, and TolC, which resides in the outer membrane. HlyD apparently forms a continuous channel that bridges the entire periplasm, interacting with TolC and HlyB. This arrangement prevents the appearance of periplasmic intermediates of HlyA during substrate transport. Little is known about the molecular details of HlyA transport, but it is evident that ATP-hydrolysis by the ABC-transporter HlyB is a necessary source of energy.
Probab=100.00 E-value=1.7e-33 Score=310.72 Aligned_cols=205 Identities=26% Similarity=0.382 Sum_probs=158.4
Q ss_pred eeeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCceeeEEEECCccCCCCC---CCceEEEEecCCCCCCCC
Q 000997 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV---PPRTSAYVSQQDWQVAEM 224 (1194)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~~---~~~~~~yv~Q~d~~~~~l 224 (1194)
.++|+|+|+++++|++++|+|||||||||||++|+|.+++. +|+|.++|.++.... .++.++|++|++.++ ..
T Consensus 15 ~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~-~~ 90 (237)
T cd03252 15 PVILDNISLRIKPGEVVGIVGRSGSGKSTLTKLIQRFYVPE---NGRVLVDGHDLALADPAWLRRQVGVVLQENVLF-NR 90 (237)
T ss_pred ccceeceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCC---CCEEEECCeehHhcCHHHHhhcEEEEcCCchhc-cc
Confidence 45999999999999999999999999999999999999876 999999998765332 245799999998766 47
Q ss_pred CHHHHHHHhhhccCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhccCcchhHHHHHHHHHh--CCcccccccccCc
Q 000997 225 TVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKIL--GLDTCADTLVGDE 302 (1194)
Q Consensus 225 TV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~k~~~~~~~~~~~~~~~~l~~l--gL~~~~dt~vg~~ 302 (1194)
||.||+.+... . ...+.+.+.. + ....+.+++.+ |++...+.
T Consensus 91 tv~~nl~~~~~--~--~~~~~~~~~~------------------~---------~~~~~~~l~~l~~~~~~~~~~----- 134 (237)
T cd03252 91 SIRDNIALADP--G--MSMERVIEAA------------------K---------LAGAHDFISELPEGYDTIVGE----- 134 (237)
T ss_pred hHHHHhhccCC--C--CCHHHHHHHH------------------H---------HcCcHHHHHhCcccccchhhc-----
Confidence 99999987432 1 0011000000 0 00123344444 44433333
Q ss_pred cCCCCChhhhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEc
Q 000997 303 MLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLS 382 (1194)
Q Consensus 303 ~~~~LSGGqkqRvsia~al~~~~~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~ 382 (1194)
.+..|||||||||+||+||+.+|++++|||||+|||+.+...+.+.|+++++ + .+|+.++|+.+++. .+|++++|+
T Consensus 135 ~~~~LSgG~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~--~-~tiii~sH~~~~~~-~~d~v~~l~ 210 (237)
T cd03252 135 QGAGLSGGQRQRIAIARALIHNPRILIFDEATSALDYESEHAIMRNMHDICA--G-RTVIIIAHRLSTVK-NADRIIVME 210 (237)
T ss_pred CCCcCCHHHHHHHHHHHHHhhCCCEEEEeCCcccCCHHHHHHHHHHHHHhcC--C-CEEEEEeCCHHHHH-hCCEEEEEE
Confidence 3457999999999999999999999999999999999999999999998852 4 45555677777774 699999999
Q ss_pred CCeEEEecChhhHH
Q 000997 383 EGQIVYQGPRVSVL 396 (1194)
Q Consensus 383 ~G~iv~~G~~~~~~ 396 (1194)
+|++++.|+.+++.
T Consensus 211 ~G~i~~~~~~~~~~ 224 (237)
T cd03252 211 KGRIVEQGSHDELL 224 (237)
T ss_pred CCEEEEEcCHHHHH
Confidence 99999999987764
No 469
>PRK14252 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.4e-33 Score=312.33 Aligned_cols=219 Identities=25% Similarity=0.276 Sum_probs=170.7
Q ss_pred eeEeecceeeeecccccccccccccceEEeeeeeEEEeCCcEEEEEccCCCChHHHHhhhcCCCCCC---eeEEEEEEcC
Q 000997 816 SMAFGNINYFVDVPVELKQEGVLEDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGG---IIEGDIYISG 892 (1194)
Q Consensus 816 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~---~~~G~i~i~g 892 (1194)
.+.++|+++.+ +++.+|+|+|+++++||+++|+|+||||||||+++|+|...+. +.+|+|.++|
T Consensus 16 ~l~~~~l~~~~-------------~~~~vl~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~sG~i~~~g 82 (265)
T PRK14252 16 KSEVNKLNFYY-------------GGYQALKNINMMVHEKQVTALIGPSGCGKSTFLRCFNRMHDLYPGNHYEGEIILHP 82 (265)
T ss_pred eEEEEEEEEEE-------------CCeeeeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhcccCCCCCCCcccEEEEcC
Confidence 35666766544 2357999999999999999999999999999999999976421 2689999999
Q ss_pred ccCC-------hhcccceeeEeecCCCCCCCCcHHHHHHHHhhhcCCCcCcHHHHHHHHHHHHHHcCCCcccCCcccCCC
Q 000997 893 YPKR-------QETFARISGYCEQNDIHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPG 965 (1194)
Q Consensus 893 ~~~~-------~~~~~~~~gyv~Q~~~~~~~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~ 965 (1194)
.+.. ...+++.+||++|++.+++. |++||+.+........ .....++.++++++.+++.+....... ..
T Consensus 83 ~~~~~~~~~~~~~~~~~~i~~~~q~~~~~~~-tv~eni~~~~~~~~~~--~~~~~~~~~~~~l~~~~l~~~l~~~~~-~~ 158 (265)
T PRK14252 83 DNVNILSPEVDPIEVRMRISMVFQKPNPFPK-SIFENVAYGLRIRGVK--RRSILEERVENALRNAALWDEVKDRLG-DL 158 (265)
T ss_pred ccccccccccCHHHHhccEEEEccCCcCCcc-hHHHHHHhHHHHcCCC--hHHHHHHHHHHHHHHcCCchhhhHHHh-CC
Confidence 7642 12345679999999988886 9999998764322110 112223456777888777421111111 12
Q ss_pred CCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCeEEEEccC
Q 000997 966 INGLSTEQRKRLTIAVELVANPSIVFMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRG 1045 (1194)
Q Consensus 966 ~~~LSgGqrqrl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~g 1045 (1194)
+..||+|||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++++ ++|||++||+++ ++.+.+|++++|+ +
T Consensus 159 ~~~LS~G~~qrv~laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~-~~tiiivth~~~-~~~~~~d~i~~l~-~ 235 (265)
T PRK14252 159 AFNLSGGQQQRLCIARALATDPEILLFDEPTSALDPIATASIEELISDLKN-KVTILIVTHNMQ-QAARVSDYTAYMY-M 235 (265)
T ss_pred cccCCHHHHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHh-CCEEEEEecCHH-HHHHhCCEEEEEE-C
Confidence 357999999999999999999999999999999999999999999999865 699999999976 4667899999998 5
Q ss_pred cEEEEeCCC
Q 000997 1046 GELIYAGPL 1054 (1194)
Q Consensus 1046 G~~~~~g~~ 1054 (1194)
|+++..|+.
T Consensus 236 G~i~~~g~~ 244 (265)
T PRK14252 236 GELIEFGAT 244 (265)
T ss_pred CEEEEeCCH
Confidence 889988874
No 470
>cd03254 ABCC_Glucan_exporter_like Glucan exporter ATP-binding protein. In A. tumefaciens cyclic beta-1, 2-glucan must be transported into the periplasmic space to exert its action as a virluence factor. This subfamily belongs to the MRP-like family and is involved in drug, peptide, and lipid export. The MRP-like family, similar to all ABC proteins, have a common four-domain core structure constituted by two membrane-spanning domains each composed of six transmembrane (TM) helices and two nucleotide-binding domains (NBD). ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=7.9e-34 Score=311.76 Aligned_cols=197 Identities=26% Similarity=0.376 Sum_probs=156.0
Q ss_pred eEEeeeeeEEEeCCcEEEEEccCCCChHHHHhhhcCCCCCCeeEEEEEEcCccCCh---hcccceeeEeecCCCCCCCCc
Q 000997 842 LQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ---ETFARISGYCEQNDIHSPGLT 918 (1194)
Q Consensus 842 ~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~---~~~~~~~gyv~Q~~~~~~~lT 918 (1194)
+.+|+|+||++++|++++|+|||||||||||++|+|..+ +.+|+|.++|.++.. ..+++.++|++|++.+++. |
T Consensus 16 ~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~~-t 92 (229)
T cd03254 16 KPVLKDINFSIKPGETVAIVGPTGAGKTTLINLLMRFYD--PQKGQILIDGIDIRDISRKSLRSMIGVVLQDTFLFSG-T 92 (229)
T ss_pred CccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcC--CCCCEEEECCEeHHHcCHHHHhhhEEEecCCchhhhh-H
Confidence 359999999999999999999999999999999999876 468999999987532 3356679999999887775 9
Q ss_pred HHHHHHHHhhhcCCCcCcHHHHHHHHHHHHHHcCCCcccCCcc------cCCCCCCCCHHHHHHHHHHHHHhhCCCEEEE
Q 000997 919 VLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALI------GLPGINGLSTEQRKRLTIAVELVANPSIVFM 992 (1194)
Q Consensus 919 v~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~------~~~~~~~LSgGqrqrl~ia~aL~~~p~illL 992 (1194)
++||+.+.... ... ..+++.++.+++.+..+.+. ....+..|||||||||+||++|+.+|++|+|
T Consensus 93 v~~~~~~~~~~-----~~~----~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~LS~G~~~rv~la~al~~~p~llll 163 (229)
T cd03254 93 IMENIRLGRPN-----ATD----EEVIEAAKEAGAHDFIMKLPNGYDTVLGENGGNLSQGERQLLAIARAMLRDPKILIL 163 (229)
T ss_pred HHHHHhccCCC-----CCH----HHHHHHHHHhChHHHHHhCcccccCHhhcCCCcCCHHHHHHHHHHHHHhcCCCEEEE
Confidence 99999864211 111 12334444444433222210 0112468999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCeEEEEccCcEEEEeCCC
Q 000997 993 DEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1194)
Q Consensus 993 DEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~ 1054 (1194)
||||+|||+.++..+++.|+++. +|+|||++||+++ .+ +.+|++++|. +|++++.|+.
T Consensus 164 DEP~~~LD~~~~~~l~~~l~~~~-~~~tii~~sh~~~-~~-~~~d~i~~l~-~g~~~~~~~~ 221 (229)
T cd03254 164 DEATSNIDTETEKLIQEALEKLM-KGRTSIIIAHRLS-TI-KNADKILVLD-DGKIIEEGTH 221 (229)
T ss_pred eCccccCCHHHHHHHHHHHHHhc-CCCEEEEEecCHH-HH-hhCCEEEEEe-CCeEEEeCCH
Confidence 99999999999999999999985 5899999999986 34 5699999998 4788887764
No 471
>cd03249 ABC_MTABC3_MDL1_MDL2 MTABC3 (also known as ABCB6) is a mitochondrial ATP-binding cassette protein involved in iron homeostasis and one of four ABC transporters expressed in the mitochondrial inner membrane, the other three being MDL1(ABC7), MDL2, and ATM1. In fact, the yeast MDL1 (multidrug resistance-like protein 1) and MDL2 (multidrug resistance-like protein 2) transporters are also included in this CD. MDL1 is an ATP-dependent permease that acts as a high-copy suppressor of ATM1 and is thought to have a role in resistance to oxidative stress. Interestingly, subfamily B is more closely related to the carboxyl-terminal component of subfamily C than the two halves of ABCC molecules are with one another.
Probab=100.00 E-value=5.4e-34 Score=314.85 Aligned_cols=196 Identities=28% Similarity=0.397 Sum_probs=154.4
Q ss_pred eEEeeeeeEEEeCCcEEEEEccCCCChHHHHhhhcCCCCCCeeEEEEEEcCccCCh---hcccceeeEeecCCCCCCCCc
Q 000997 842 LQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ---ETFARISGYCEQNDIHSPGLT 918 (1194)
Q Consensus 842 ~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~---~~~~~~~gyv~Q~~~~~~~lT 918 (1194)
+.+|+|+||++++||+++|+|+||||||||+++|+|..+ +.+|+|.++|.++.. ...++.++|++|++.+++ .|
T Consensus 16 ~~~l~~i~~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~--~~~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~-~t 92 (238)
T cd03249 16 VPILKGLSLTIPPGKTVALVGSSGCGKSTVVSLLERFYD--PTSGEILLDGVDIRDLNLRWLRSQIGLVSQEPVLFD-GT 92 (238)
T ss_pred ccceeceEEEecCCCEEEEEeCCCCCHHHHHHHHhccCC--CCCCEEEECCEehhhcCHHHHHhhEEEECCchhhhh-hh
Confidence 469999999999999999999999999999999999876 468999999987532 234567999999988776 69
Q ss_pred HHHHHHHHhhhcCCCcCcHHHHHHHHHHHHHHcCCCcccCC-------cccCCCCCCCCHHHHHHHHHHHHHhhCCCEEE
Q 000997 919 VLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGA-------LIGLPGINGLSTEQRKRLTIAVELVANPSIVF 991 (1194)
Q Consensus 919 v~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~-------~~~~~~~~~LSgGqrqrl~ia~aL~~~p~ill 991 (1194)
++|++.+....+ ... ..++.++..++.+..+. ... ..+..|||||||||+||++|+.+|++|+
T Consensus 93 v~e~l~~~~~~~-----~~~----~~~~~~~~~~~~~~~~~l~~~~~~~~~-~~~~~LS~G~~qrv~la~al~~~p~lll 162 (238)
T cd03249 93 IAENIRYGKPDA-----TDE----EVEEAAKKANIHDFIMSLPDGYDTLVG-ERGSQLSGGQKQRIAIARALLRNPKILL 162 (238)
T ss_pred HHHHhhccCCCC-----CHH----HHHHHHHHcChHHHHHhhccccceeec-cCCccCCHHHHHHHHHHHHHhcCCCEEE
Confidence 999998753211 111 11222333333221111 111 1246899999999999999999999999
Q ss_pred EeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCeEEEEccCcEEEEeCCC
Q 000997 992 MDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1194)
Q Consensus 992 LDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~ 1054 (1194)
|||||+|||+.++..+++.|+++. +|+|||+++|+++ ++ +.||++++|.+ |++++.|+.
T Consensus 163 lDEP~~gLD~~~~~~l~~~l~~~~-~g~~vi~~sh~~~-~~-~~~d~v~~l~~-G~i~~~~~~ 221 (238)
T cd03249 163 LDEATSALDAESEKLVQEALDRAM-KGRTTIVIAHRLS-TI-RNADLIAVLQN-GQVVEQGTH 221 (238)
T ss_pred EeCccccCCHHHHHHHHHHHHHhc-CCCEEEEEeCCHH-HH-hhCCEEEEEEC-CEEEEeCCH
Confidence 999999999999999999999987 7999999999976 34 47999999985 789988874
No 472
>PRK11176 lipid transporter ATP-binding/permease protein; Provisional
Probab=100.00 E-value=6.2e-34 Score=355.04 Aligned_cols=213 Identities=25% Similarity=0.346 Sum_probs=176.1
Q ss_pred ceeEeecceeeeecccccccccccccceEEeeeeeEEEeCCcEEEEEccCCCChHHHHhhhcCCCCCCeeEEEEEEcCcc
Q 000997 815 LSMAFGNINYFVDVPVELKQEGVLEDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYP 894 (1194)
Q Consensus 815 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~ 894 (1194)
..++++|++|.++. ..+.+|+|+|++++|||++||+|+||||||||+++|+|..+ +.+|+|.+||.+
T Consensus 340 ~~i~~~~vsf~y~~-----------~~~~il~~i~l~i~~G~~~aIvG~sGsGKSTLl~ll~gl~~--p~~G~I~i~g~~ 406 (582)
T PRK11176 340 GDIEFRNVTFTYPG-----------KEVPALRNINFKIPAGKTVALVGRSGSGKSTIANLLTRFYD--IDEGEILLDGHD 406 (582)
T ss_pred CeEEEEEEEEecCC-----------CCCccccCceEEeCCCCEEEEECCCCCCHHHHHHHHHhccC--CCCceEEECCEE
Confidence 36889999887631 23569999999999999999999999999999999999876 468999999988
Q ss_pred CC---hhcccceeeEeecCCCCCCCCcHHHHHHHHhhhcCCCcCcHHHHHHHHHHHHHHcCCCcc-------cCCcccCC
Q 000997 895 KR---QETFARISGYCEQNDIHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSL-------SGALIGLP 964 (1194)
Q Consensus 895 ~~---~~~~~~~~gyv~Q~~~~~~~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~-------~~~~~~~~ 964 (1194)
.. ...+++.++||+|++.+++ -|++||+.++. +...+. +.++++++..++.+. .|+.+|..
T Consensus 407 i~~~~~~~~~~~i~~v~Q~~~lf~-~Ti~~Ni~~~~----~~~~~~----~~i~~al~~~~l~~~i~~lp~Gldt~ig~~ 477 (582)
T PRK11176 407 LRDYTLASLRNQVALVSQNVHLFN-DTIANNIAYAR----TEQYSR----EQIEEAARMAYAMDFINKMDNGLDTVIGEN 477 (582)
T ss_pred hhhcCHHHHHhhceEEccCceeec-chHHHHHhcCC----CCCCCH----HHHHHHHHHhCcHHHHHhcccccCceeCCC
Confidence 64 3457788999999999887 49999998642 211222 346667777765442 35556644
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCeEEEEcc
Q 000997 965 GINGLSTEQRKRLTIAVELVANPSIVFMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKR 1044 (1194)
Q Consensus 965 ~~~~LSgGqrqrl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~ 1044 (1194)
...||||||||++|||||+++|+||+||||||+||+.++..+++.|+++. +++|||++||+++ ..+.||+|++|+
T Consensus 478 -g~~LSGGqrQRi~LARall~~~~ililDEptsaLD~~t~~~i~~~l~~~~-~~~tvI~VtHr~~--~~~~~D~Ii~l~- 552 (582)
T PRK11176 478 -GVLLSGGQRQRIAIARALLRDSPILILDEATSALDTESERAIQAALDELQ-KNRTSLVIAHRLS--TIEKADEILVVE- 552 (582)
T ss_pred -CCcCCHHHHHHHHHHHHHHhCCCEEEEECccccCCHHHHHHHHHHHHHHh-CCCEEEEEecchH--HHHhCCEEEEEE-
Confidence 36799999999999999999999999999999999999999999999874 5799999999975 567899999998
Q ss_pred CcEEEEeCCC
Q 000997 1045 GGELIYAGPL 1054 (1194)
Q Consensus 1045 gG~~~~~g~~ 1054 (1194)
+|+++..|+.
T Consensus 553 ~g~i~e~g~~ 562 (582)
T PRK11176 553 DGEIVERGTH 562 (582)
T ss_pred CCEEEEeCCH
Confidence 5899999984
No 473
>PRK13547 hmuV hemin importer ATP-binding subunit; Provisional
Probab=100.00 E-value=4.3e-33 Score=311.98 Aligned_cols=212 Identities=26% Similarity=0.367 Sum_probs=169.0
Q ss_pred eeeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCC-----CceeeEEEECCccCCCCC---CCceEEEEecCCC
Q 000997 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHH-----LQVSGKITYNGHGFKEFV---PPRTSAYVSQQDW 219 (1194)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~-----~~~~G~i~~~G~~~~~~~---~~~~~~yv~Q~d~ 219 (1194)
+.+|+|+|++|++|++++|+|||||||||||++|+|.+++. ...+|+|.++|.++.... .++.++|++|++.
T Consensus 14 ~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~laG~~~p~~~~~~~~~~G~i~~~g~~~~~~~~~~~~~~~~~v~q~~~ 93 (272)
T PRK13547 14 RAILRDLSLRIEPGRVTALLGRNGAGKSTLLKALAGDLTGGGAPRGARVTGDVTLNGEPLAAIDAPRLARLRAVLPQAAQ 93 (272)
T ss_pred EeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCcccccccCCceEEEECCEEcccCCHHHHHhhcEEecccCC
Confidence 36999999999999999999999999999999999998763 112899999998875432 2346899999987
Q ss_pred CCCCCCHHHHHHHhhhccCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhccCcchhHHHHHHHHHhCCcccccccc
Q 000997 220 QVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLV 299 (1194)
Q Consensus 220 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~k~~~~~~~~~~~~~~~~l~~lgL~~~~dt~v 299 (1194)
.++.+||+||+.++........ . ... .+....++.+++.+||++..++.+
T Consensus 94 ~~~~~tv~e~l~~~~~~~~~~~--~-------------~~~---------------~~~~~~~~~~l~~~~l~~~~~~~~ 143 (272)
T PRK13547 94 PAFAFSAREIVLLGRYPHARRA--G-------------ALT---------------HRDGEIAWQALALAGATALVGRDV 143 (272)
T ss_pred CCCCCcHHHHHhhccccccccc--c-------------cCC---------------HHHHHHHHHHHHHcCcHhhhcCCc
Confidence 6677999999987531100000 0 000 001224677899999987666544
Q ss_pred cCccCCCCChhhhhHHHHHHHHh---------CCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhH
Q 000997 300 GDEMLKGISGGQKKRLTTGELLV---------GPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPE 370 (1194)
Q Consensus 300 g~~~~~~LSGGqkqRvsia~al~---------~~~~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~ 370 (1194)
..|||||||||+||+||+ .+|++|+|||||+|||+.+...+.+.|+++.+.. +++|+.++|..++
T Consensus 144 -----~~LSgG~~qrv~laral~~~~~~~~~~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~-~~tviiisH~~~~ 217 (272)
T PRK13547 144 -----TTLSGGELARVQFARVLAQLWPPHDAAQPPRYLLLDEPTAALDLAHQHRLLDTVRRLARDW-NLGVLAIVHDPNL 217 (272)
T ss_pred -----ccCCHHHHHHHHHHHHHhccccccccCCCCCEEEEcCccccCCHHHHHHHHHHHHHHHHhc-CCEEEEEECCHHH
Confidence 469999999999999999 5999999999999999999999999999987533 4556667888889
Q ss_pred HHhhcCeEEEEcCCeEEEecChhhH
Q 000997 371 AYELFDDVILLSEGQIVYQGPRVSV 395 (1194)
Q Consensus 371 ~~~~~D~vilL~~G~iv~~G~~~~~ 395 (1194)
+.+++|++++|++|++++.|+.+++
T Consensus 218 ~~~~~d~i~~l~~G~i~~~g~~~~~ 242 (272)
T PRK13547 218 AARHADRIAMLADGAIVAHGAPADV 242 (272)
T ss_pred HHHhCCEEEEEECCeEEEecCHHHH
Confidence 9999999999999999999998776
No 474
>cd03215 ABC_Carb_Monos_II This family represents domain II of the carbohydrate uptake proteins that transport only monosaccharides (Monos). The Carb_Monos family is involved in the uptake of monosaccharides, such as pentoses (such as xylose, arabinose, and ribose) and hexoses (such as xylose, arabinose, and ribose), that cannot be broken down to simple sugars by hydrolysis. In members of Carb_Monos family the single hydrophobic gene product forms a homodimer, while the ABC protein represents a fusion of two nucleotide-binding domains. However, it is assumed that two copies of the ABC domains are present in the assembled transporter.
Probab=100.00 E-value=1.2e-33 Score=298.70 Aligned_cols=160 Identities=24% Similarity=0.455 Sum_probs=142.1
Q ss_pred EeeeeeEEEeCCcEEEEEccCCCChHHHHhhhcCCCCCCeeEEEEEEcCccCCh----hcccceeeEeecCC---CCCCC
Q 000997 844 LLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ----ETFARISGYCEQND---IHSPG 916 (1194)
Q Consensus 844 iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~----~~~~~~~gyv~Q~~---~~~~~ 916 (1194)
+|+++|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++.. ...++.++|++|++ .+++.
T Consensus 15 ~l~~vs~~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~~~~ 92 (182)
T cd03215 15 AVRDVSFEVRAGEIVGIAGLVGNGQTELAEALFGLRP--PASGEITLDGKPVTRRSPRDAIRAGIAYVPEDRKREGLVLD 92 (182)
T ss_pred eecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEECCccCHHHHHhCCeEEecCCcccCcccCC
Confidence 8999999999999999999999999999999999876 468999999987643 23456799999984 57788
Q ss_pred CcHHHHHHHHhhhcCCCcCcHHHHHHHHHHHHHHcCCCcccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCC
Q 000997 917 LTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPT 996 (1194)
Q Consensus 917 lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEPT 996 (1194)
+|++||+.+... ||+|||||++||+||+.+|++|+|||||
T Consensus 93 ~t~~e~l~~~~~----------------------------------------LS~G~~qrl~la~al~~~p~llllDEP~ 132 (182)
T cd03215 93 LSVAENIALSSL----------------------------------------LSGGNQQKVVLARWLARDPRVLILDEPT 132 (182)
T ss_pred CcHHHHHHHHhh----------------------------------------cCHHHHHHHHHHHHHccCCCEEEECCCC
Confidence 999999976310 8999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCeEEEEccCcE
Q 000997 997 SGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGE 1047 (1194)
Q Consensus 997 sgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~ 1047 (1194)
+|||+.++..+++.|+++.++|+|||+++|+++ ++.+.+|++++|.+ |+
T Consensus 133 ~~LD~~~~~~l~~~l~~~~~~~~tiii~sh~~~-~~~~~~d~v~~l~~-G~ 181 (182)
T cd03215 133 RGVDVGAKAEIYRLIRELADAGKAVLLISSELD-ELLGLCDRILVMYE-GR 181 (182)
T ss_pred cCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhCCEEEEecC-Cc
Confidence 999999999999999999777999999999975 57778999999985 44
No 475
>PRK14251 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5e-33 Score=309.62 Aligned_cols=211 Identities=22% Similarity=0.323 Sum_probs=165.7
Q ss_pred eeeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHhcCcCC--CCceeeEEEECCccCCCC-----CCCceEEEEecCCCC
Q 000997 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGH--HLQVSGKITYNGHGFKEF-----VPPRTSAYVSQQDWQ 220 (1194)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~--~~~~~G~i~~~G~~~~~~-----~~~~~~~yv~Q~d~~ 220 (1194)
+++|+|+|++|++||+++|+||||||||||+++|+|.+++ ..+.+|+|.++|.++... ..++.++|++|++.+
T Consensus 17 ~~~l~~~sl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~~~~G~v~i~g~~~~~~~~~~~~~~~~i~~~~q~~~~ 96 (251)
T PRK14251 17 YEALHGISLDFEEKELTALIGPSGCGKSTFLRCLNRMNDDIENIKITGEIKFEGQNIYGSKMDLVELRKEVGMVFQQPTP 96 (251)
T ss_pred eeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhhccccccCCCcceEEEECCEEcccccchHHHhhccEEEEecCCcc
Confidence 3599999999999999999999999999999999999862 113589999999876431 124579999999887
Q ss_pred CCCCCHHHHHHHhhhccCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhccCcchhHHHHHHHHHhCCccccccccc
Q 000997 221 VAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVG 300 (1194)
Q Consensus 221 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~k~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg 300 (1194)
++ .||+||+.++....+.... + .....++.+++.+||........
T Consensus 97 ~~-~tv~enl~~~~~~~~~~~~--------------------~-------------~~~~~~~~~l~~~~l~~~~~~~~- 141 (251)
T PRK14251 97 FP-FSVYDNVAYGLKIAGVKDK--------------------E-------------LIDQRVEESLKQAAIWKETKDNL- 141 (251)
T ss_pred CC-CcHHHHHHHHHHHcCCCCH--------------------H-------------HHHHHHHHHHHHcCCCcchHHHh-
Confidence 75 7999999875432211000 0 00123566778888842110001
Q ss_pred CccCCCCChhhhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEE
Q 000997 301 DEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVIL 380 (1194)
Q Consensus 301 ~~~~~~LSGGqkqRvsia~al~~~~~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vil 380 (1194)
+.....||||||||++||+||+.+|++++|||||+|||+.+...+.+.|+++.+ + ++|+.++|..+++.+++|+|++
T Consensus 142 ~~~~~~LS~Gq~qr~~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~--~-~tiiiisH~~~~~~~~~d~i~~ 218 (251)
T PRK14251 142 DRNAQAFSGGQQQRICIARALAVRPKVVLLDEPTSALDPISSSEIEETLMELKH--Q-YTFIMVTHNLQQAGRISDQTAF 218 (251)
T ss_pred ccChhhCCHHHHHHHHHHHHHhcCCCEEEecCCCccCCHHHHHHHHHHHHHHHc--C-CeEEEEECCHHHHHhhcCEEEE
Confidence 223457999999999999999999999999999999999999999999998853 3 5666688899999999999999
Q ss_pred EcCCeEEEecChhhHH
Q 000997 381 LSEGQIVYQGPRVSVL 396 (1194)
Q Consensus 381 L~~G~iv~~G~~~~~~ 396 (1194)
|++|+++..|+.+++.
T Consensus 219 l~~G~i~~~~~~~~~~ 234 (251)
T PRK14251 219 LMNGDLIEAGPTEEMF 234 (251)
T ss_pred EECCEEEEeCCHHHHH
Confidence 9999999999987763
No 476
>PRK13545 tagH teichoic acids export protein ATP-binding subunit; Provisional
Probab=100.00 E-value=3.7e-33 Score=327.15 Aligned_cols=192 Identities=20% Similarity=0.304 Sum_probs=161.0
Q ss_pred eEEeeeeeEEEeCCcEEEEEccCCCChHHHHhhhcCCCCCCeeEEEEEEcCccCChhcccceeeEeecCCCCCCCCcHHH
Q 000997 842 LQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQETFARISGYCEQNDIHSPGLTVLE 921 (1194)
Q Consensus 842 ~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~~~~~~~gyv~Q~~~~~~~lTv~e 921 (1194)
+.+|+||||++++|+++||+||||||||||+++|+|..+ +.+|+|.++|.+. ++.+...+.+.+|++|
T Consensus 37 ~~IL~nVSfsI~~GEivgIiGpNGSGKSTLLkiLaGLl~--P~sGeI~I~G~~~----------~i~~~~~l~~~lTV~E 104 (549)
T PRK13545 37 HYALNNISFEVPEGEIVGIIGLNGSGKSTLSNLIAGVTM--PNKGTVDIKGSAA----------LIAISSGLNGQLTGIE 104 (549)
T ss_pred ceEEeeeEEEEeCCCEEEEEcCCCCCHHHHHHHHhCCCC--CCceEEEECCEee----------eEEeccccCCCCcHHH
Confidence 469999999999999999999999999999999999876 4689999999641 2223344567789999
Q ss_pred HHHHHhhhcCCCcCcHHHHHHHHHHHHHHcCCCcccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCH
Q 000997 922 SLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSGLDA 1001 (1194)
Q Consensus 922 ~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEPTsgLD~ 1001 (1194)
++.+...... ....+..+.++++++.+++.+..+..+ ..||||||||++|||||+.+|++|+|||||+|||+
T Consensus 105 nL~l~~~~~~---~~~~e~~e~i~elLe~lgL~~~ld~~~-----~~LSGGQrQRVaLArAL~~~P~LLLLDEPTsgLD~ 176 (549)
T PRK13545 105 NIELKGLMMG---LTKEKIKEIIPEIIEFADIGKFIYQPV-----KTYSSGMKSRLGFAISVHINPDILVIDEALSVGDQ 176 (549)
T ss_pred HHHhhhhhcC---CCHHHHHHHHHHHHHHcCChhHhhCCc-----ccCCHHHHHHHHHHHHHHhCCCEEEEECCcccCCH
Confidence 9987543321 223344456778899999987766543 58999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCeEEEEccCcEEEEeCCCC
Q 000997 1002 RAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLG 1055 (1194)
Q Consensus 1002 ~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~~ 1055 (1194)
.++..+++.|++++++|+|||+++|+++ .+.+.||++++|. +|++++.|+..
T Consensus 177 ~sr~~LlelL~el~~~G~TIIIVSHdl~-~i~~l~DrIivL~-~GkIv~~G~~~ 228 (549)
T PRK13545 177 TFTKKCLDKMNEFKEQGKTIFFISHSLS-QVKSFCTKALWLH-YGQVKEYGDIK 228 (549)
T ss_pred HHHHHHHHHHHHHHhCCCEEEEEECCHH-HHHHhCCEEEEEE-CCEEEEECCHH
Confidence 9999999999999877999999999986 5667899999998 57999988753
No 477
>PRK14244 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.8e-33 Score=311.50 Aligned_cols=212 Identities=21% Similarity=0.290 Sum_probs=167.6
Q ss_pred eeeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHhcCcC--CCCceeeEEEECCccCCCCC-----CCceEEEEecCCCC
Q 000997 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLG--HHLQVSGKITYNGHGFKEFV-----PPRTSAYVSQQDWQ 220 (1194)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~--~~~~~~G~i~~~G~~~~~~~-----~~~~~~yv~Q~d~~ 220 (1194)
+++|+|+|++|++|++++|+||||||||||+++|+|... +..+.+|+|+++|.++.... .++.++|++|++.+
T Consensus 18 ~~~l~~is~~i~~Ge~~~I~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~i~~v~q~~~~ 97 (251)
T PRK14244 18 KQILFDINLDIYKREVTAFIGPSGCGKSTFLRCFNRMNDFVPNCKVKGELDIDGIDVYSVDTNVVLLRAKVGMVFQKPNP 97 (251)
T ss_pred eeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccCCCCCcceEEEECCEehHhcccchHHHhhhEEEEecCccc
Confidence 469999999999999999999999999999999999875 22235899999998764321 24679999999887
Q ss_pred CCCCCHHHHHHHhhhccCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhccCcchhHHHHHHHHHhCCccccccccc
Q 000997 221 VAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVG 300 (1194)
Q Consensus 221 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~k~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg 300 (1194)
++. ||.||+.+....++..... ......++.+++.+||.+...+.+.
T Consensus 98 ~~~-tv~~ni~~~~~~~~~~~~~--------------------------------~~~~~~~~~~l~~~~l~~~~~~~~~ 144 (251)
T PRK14244 98 FPK-SIYDNVAYGPKLHGLAKNK--------------------------------KKLDEIVEKSLTSVGLWEELGDRLK 144 (251)
T ss_pred ccC-CHHHHHHHHHHhcCCCCCH--------------------------------HHHHHHHHHHHHHcCCCchhhhHhh
Confidence 875 9999998763322110000 0011236678889998653222221
Q ss_pred CccCCCCChhhhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEE
Q 000997 301 DEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVIL 380 (1194)
Q Consensus 301 ~~~~~~LSGGqkqRvsia~al~~~~~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vil 380 (1194)
...+.|||||||||+||+||+.+|++++|||||+|||+.+...+.+.|+++.+ + .+|+.++|...++.+++|+|++
T Consensus 145 -~~~~~LS~Gq~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~--~-~tiiiisH~~~~~~~~~d~i~~ 220 (251)
T PRK14244 145 -DSAFELSGGQQQRLCIARAIAVKPTMLLMDEPCSALDPVATNVIENLIQELKK--N-FTIIVVTHSMKQAKKVSDRVAF 220 (251)
T ss_pred -cChhhCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhc--C-CeEEEEeCCHHHHHhhcCEEEE
Confidence 23457999999999999999999999999999999999999999999998742 3 5566688888899999999999
Q ss_pred EcCCeEEEecChhhHH
Q 000997 381 LSEGQIVYQGPRVSVL 396 (1194)
Q Consensus 381 L~~G~iv~~G~~~~~~ 396 (1194)
|++|++++.|+.+++.
T Consensus 221 l~~G~i~~~~~~~~~~ 236 (251)
T PRK14244 221 FQSGRIVEYNTTQEIF 236 (251)
T ss_pred EECCEEEEeCCHHHHh
Confidence 9999999999887663
No 478
>PRK11701 phnK phosphonate C-P lyase system protein PhnK; Provisional
Probab=100.00 E-value=3.7e-33 Score=311.82 Aligned_cols=206 Identities=25% Similarity=0.349 Sum_probs=167.6
Q ss_pred eeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCceeeEEEECCcc-----CCCCCC-------CceEEEEec
Q 000997 149 TILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHG-----FKEFVP-------PRTSAYVSQ 216 (1194)
Q Consensus 149 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~-----~~~~~~-------~~~~~yv~Q 216 (1194)
.+|+|+|+++++|++++|+||||||||||+++|+|.++|. +|+|.++|.+ +..... ++.++|++|
T Consensus 20 ~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~i~~~~~~~~~~~~~~~i~~v~q 96 (258)
T PRK11701 20 KGCRDVSFDLYPGEVLGIVGESGSGKTTLLNALSARLAPD---AGEVHYRMRDGQLRDLYALSEAERRRLLRTEWGFVHQ 96 (258)
T ss_pred eeeeeeeEEEeCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CCEEEECCccccccccccCCHHHHHHHhhcceEEEee
Confidence 5999999999999999999999999999999999999876 9999999987 544321 346999999
Q ss_pred CCC--CCCCCCHHHHHHHhhhccCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhccCcchhHHHHHHHHHhCCcc-
Q 000997 217 QDW--QVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDT- 293 (1194)
Q Consensus 217 ~d~--~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~k~~~~~~~~~~~~~~~~l~~lgL~~- 293 (1194)
++. +++.+|+.||+.+.....+.. .+ + .....++++++.+|+..
T Consensus 97 ~~~~~~~~~~~~~~~i~~~~~~~~~~-~~------------------~--------------~~~~~~~~~l~~~~l~~~ 143 (258)
T PRK11701 97 HPRDGLRMQVSAGGNIGERLMAVGAR-HY------------------G--------------DIRATAGDWLERVEIDAA 143 (258)
T ss_pred CcccccCccccHHHHHHHHHHHhccC-cH------------------H--------------HHHHHHHHHHHHcCCChh
Confidence 973 577789999997632211000 00 0 01223677889999964
Q ss_pred cccccccCccCCCCChhhhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHh
Q 000997 294 CADTLVGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYE 373 (1194)
Q Consensus 294 ~~dt~vg~~~~~~LSGGqkqRvsia~al~~~~~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~ 373 (1194)
..++.+ ..|||||||||+|||||+.+|++|+|||||+|||+.+...+.+.|+++.+.. +.+|+.++|+..++.+
T Consensus 144 ~~~~~~-----~~LS~Gq~qrl~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~-~~tii~isH~~~~~~~ 217 (258)
T PRK11701 144 RIDDLP-----TTFSGGMQQRLQIARNLVTHPRLVFMDEPTGGLDVSVQARLLDLLRGLVREL-GLAVVIVTHDLAVARL 217 (258)
T ss_pred HHhCCC-----ccCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhc-CcEEEEEeCCHHHHHH
Confidence 455544 4699999999999999999999999999999999999999999999886533 4566778899999999
Q ss_pred hcCeEEEEcCCeEEEecChhhHH
Q 000997 374 LFDDVILLSEGQIVYQGPRVSVL 396 (1194)
Q Consensus 374 ~~D~vilL~~G~iv~~G~~~~~~ 396 (1194)
.+|+|++|++|++++.|+.+++.
T Consensus 218 ~~d~i~~l~~g~i~~~~~~~~~~ 240 (258)
T PRK11701 218 LAHRLLVMKQGRVVESGLTDQVL 240 (258)
T ss_pred hcCEEEEEECCEEEEeCCHHHHh
Confidence 99999999999999999987763
No 479
>PRK13540 cytochrome c biogenesis protein CcmA; Provisional
Probab=100.00 E-value=1.4e-33 Score=302.87 Aligned_cols=183 Identities=22% Similarity=0.288 Sum_probs=154.8
Q ss_pred ceEEeeeeeEEEeCCcEEEEEccCCCChHHHHhhhcCCCCCCeeEEEEEEcCccCCh--hcccceeeEeecCCCCCCCCc
Q 000997 841 RLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ--ETFARISGYCEQNDIHSPGLT 918 (1194)
Q Consensus 841 ~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~--~~~~~~~gyv~Q~~~~~~~lT 918 (1194)
++.+|+|+|+++++||++||+||||||||||+++|+|..+ +.+|+|.++|.++.. ..+++.++|++|+..+++.+|
T Consensus 13 ~~~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~--~~~G~v~~~g~~~~~~~~~~~~~i~~~~q~~~~~~~~t 90 (200)
T PRK13540 13 DQPLLQQISFHLPAGGLLHLKGSNGAGKTTLLKLIAGLLN--PEKGEILFERQSIKKDLCTYQKQLCFVGHRSGINPYLT 90 (200)
T ss_pred CeeEEeeeeEEECCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCeeEEECCCccccCHHHHHhheEEeccccccCcCCC
Confidence 4579999999999999999999999999999999999876 468999999987642 345678999999988888999
Q ss_pred HHHHHHHHhhhcCCCcCcHHHHHHHHHHHHHHcCCCcccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCC
Q 000997 919 VLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSG 998 (1194)
Q Consensus 919 v~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEPTsg 998 (1194)
|+||+.+.... .. . ...++++++.+++.+..+..+ ..||+|||||++|||+|+.+|++|+|||||+|
T Consensus 91 v~~~~~~~~~~--~~----~--~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~~rv~laral~~~p~~lilDEP~~~ 157 (200)
T PRK13540 91 LRENCLYDIHF--SP----G--AVGITELCRLFSLEHLIDYPC-----GLLSSGQKRQVALLRLWMSKAKLWLLDEPLVA 157 (200)
T ss_pred HHHHHHHHHhc--Cc----c--hHHHHHHHHHcCCchhhhCCh-----hhcCHHHHHHHHHHHHHhcCCCEEEEeCCCcc
Confidence 99999886421 11 1 235788999999876655433 47999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCeEE
Q 000997 999 LDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELL 1040 (1194)
Q Consensus 999 LD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~~d~~~ 1040 (1194)
||+.++..+.+.|++++++|.|||+++|++. ....+|..+
T Consensus 158 LD~~~~~~l~~~l~~~~~~~~tiii~sh~~~--~~~~~d~~~ 197 (200)
T PRK13540 158 LDELSLLTIITKIQEHRAKGGAVLLTSHQDL--PLNKADYEE 197 (200)
T ss_pred cCHHHHHHHHHHHHHHHHcCCEEEEEeCCch--hccccchhh
Confidence 9999999999999998777999999999975 345567544
No 480
>cd03289 ABCC_CFTR2 The CFTR subfamily domain 2. The cystic fibrosis transmembrane regulator (CFTR), the product of the gene mutated in patients with cystic fibrosis, has adapted the ABC transporter structural motif to form a tightly regulated anion channel at the apical surface of many epithelia. Use of the term assembly of a functional ion channel implies the coming together of subunits or at least smaller not-yet functional components of the active whole. In fact, on the basis of current knowledge only the CFTR polypeptide itself is required to form an ATP- and protein kinase A-dependent low-conductance chloride channel of the type present in the apical membrane of many epithelial cells. CFTR displays the typical organization (IM-ABC)2 and carries a characteristic hydrophilic R-domain that separates IM1-ABC1 from IM2-ABC2.
Probab=100.00 E-value=2e-33 Score=314.06 Aligned_cols=198 Identities=24% Similarity=0.267 Sum_probs=161.1
Q ss_pred eeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCceeeEEEECCccCCCCC---CCceEEEEecCCCCCCCCC
Q 000997 149 TILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV---PPRTSAYVSQQDWQVAEMT 225 (1194)
Q Consensus 149 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~~---~~~~~~yv~Q~d~~~~~lT 225 (1194)
.+|+|+|+.|++||+++|+|||||||||||++|+|.++ . +|+|.++|.++.... .++.++||+|++.+|+ .|
T Consensus 18 ~~l~~isl~I~~Ge~~~IvG~nGsGKSTLl~~L~gl~~-~---~G~I~i~g~~i~~~~~~~lr~~i~~v~q~~~lf~-~t 92 (275)
T cd03289 18 AVLENISFSISPGQRVGLLGRTGSGKSTLLSAFLRLLN-T---EGDIQIDGVSWNSVPLQKWRKAFGVIPQKVFIFS-GT 92 (275)
T ss_pred cceeceEEEEcCCCEEEEECCCCCCHHHHHHHHhhhcC-C---CcEEEECCEEhhhCCHHHHhhhEEEECCCcccch-hh
Confidence 48999999999999999999999999999999999985 3 799999998876542 2467999999999887 59
Q ss_pred HHHHHHHhhhccCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhccCcchhHHHHHHHHHhCCc-------cccccc
Q 000997 226 VRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLD-------TCADTL 298 (1194)
Q Consensus 226 V~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~k~~~~~~~~~~~~~~~~l~~lgL~-------~~~dt~ 298 (1194)
|+||+.+... ...+ .+...++.+||. ...|+.
T Consensus 93 v~~nl~~~~~-----~~~~------------------------------------~~~~~l~~~gL~~~~~~~p~~l~~~ 131 (275)
T cd03289 93 FRKNLDPYGK-----WSDE------------------------------------EIWKVAEEVGLKSVIEQFPGQLDFV 131 (275)
T ss_pred HHHHhhhccC-----CCHH------------------------------------HHHHHHHHcCCHHHHHhCcccccce
Confidence 9999964211 0000 122233344443 445677
Q ss_pred ccCccCCCCChhhhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeE
Q 000997 299 VGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDV 378 (1194)
Q Consensus 299 vg~~~~~~LSGGqkqRvsia~al~~~~~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~v 378 (1194)
+++ ....|||||||||+|||||+.+|+|++|||||+|||+.+...+.+.|++.. . +++|++++|..+.+. .+|+|
T Consensus 132 ~~~-~g~~LS~G~~qrl~LaRall~~p~illlDEpts~LD~~~~~~l~~~l~~~~--~-~~tii~isH~~~~i~-~~dri 206 (275)
T cd03289 132 LVD-GGCVLSHGHKQLMCLARSVLSKAKILLLDEPSAHLDPITYQVIRKTLKQAF--A-DCTVILSEHRIEAML-ECQRF 206 (275)
T ss_pred ecC-CCCCCCHHHHHHHHHHHHHhcCCCEEEEECccccCCHHHHHHHHHHHHHhc--C-CCEEEEEECCHHHHH-hCCEE
Confidence 765 456899999999999999999999999999999999999999999999763 2 455666778887775 49999
Q ss_pred EEEcCCeEEEecChhhHHH
Q 000997 379 ILLSEGQIVYQGPRVSVLD 397 (1194)
Q Consensus 379 ilL~~G~iv~~G~~~~~~~ 397 (1194)
++|++|++++.|++++++.
T Consensus 207 ~vl~~G~i~~~g~~~~l~~ 225 (275)
T cd03289 207 LVIEENKVRQYDSIQKLLN 225 (275)
T ss_pred EEecCCeEeecCCHHHHhh
Confidence 9999999999999999864
No 481
>PRK10418 nikD nickel transporter ATP-binding protein NikD; Provisional
Probab=100.00 E-value=4.2e-33 Score=310.46 Aligned_cols=206 Identities=20% Similarity=0.243 Sum_probs=166.9
Q ss_pred eeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCC-ceeeEEEECCccCCCCCC-CceEEEEecCCC--CCCCC
Q 000997 149 TILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHL-QVSGKITYNGHGFKEFVP-PRTSAYVSQQDW--QVAEM 224 (1194)
Q Consensus 149 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~-~~~G~i~~~G~~~~~~~~-~~~~~yv~Q~d~--~~~~l 224 (1194)
++|+|+|+++++|++++|+||||||||||+++|+|.+++.. +.+|+|.++|.++..... ++.++||+|++. +.+..
T Consensus 17 ~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~~~G~i~~~g~~i~~~~~~~~~i~~v~q~~~~~~~~~~ 96 (254)
T PRK10418 17 PLVHGVSLTLQRGRVLALVGGSGSGKSLTCAAALGILPAGVRQTAGRVLLDGKPVAPCALRGRKIATIMQNPRSAFNPLH 96 (254)
T ss_pred ceecceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCCcCCEEEECCeeccccccccceEEEEecCCccccCccc
Confidence 58999999999999999999999999999999999987611 148999999988753322 357999999974 44668
Q ss_pred CHHHHHHHhhhccCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhccCcchhHHHHHHHHHhCCcc---cccccccC
Q 000997 225 TVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDT---CADTLVGD 301 (1194)
Q Consensus 225 TV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~k~~~~~~~~~~~~~~~~l~~lgL~~---~~dt~vg~ 301 (1194)
|+.+++.+.+...+.. ..+..+..+++.+||.+ ..++.
T Consensus 97 ~~~~~~~~~~~~~~~~------------------------------------~~~~~~~~~l~~~~l~~~~~~~~~~--- 137 (254)
T PRK10418 97 TMHTHARETCLALGKP------------------------------------ADDATLTAALEAVGLENAARVLKLY--- 137 (254)
T ss_pred cHHHHHHHHHHHcCCC------------------------------------hHHHHHHHHHHHcCCCChhhhhhcC---
Confidence 9999886643221100 00123677888999975 23443
Q ss_pred ccCCCCChhhhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEE
Q 000997 302 EMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILL 381 (1194)
Q Consensus 302 ~~~~~LSGGqkqRvsia~al~~~~~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL 381 (1194)
...|||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|+++++.. +++|+.++|..+++.+++|++++|
T Consensus 138 --~~~LS~Gq~qrv~laral~~~p~lLlLDEPt~~LD~~~~~~l~~~L~~~~~~~-g~til~~sH~~~~~~~~~d~v~~l 214 (254)
T PRK10418 138 --PFEMSGGMLQRMMIALALLCEAPFIIADEPTTDLDVVAQARILDLLESIVQKR-ALGMLLVTHDMGVVARLADDVAVM 214 (254)
T ss_pred --CcccCHHHHHHHHHHHHHhcCCCEEEEeCCCcccCHHHHHHHHHHHHHHHHhc-CcEEEEEecCHHHHHHhCCEEEEE
Confidence 45699999999999999999999999999999999999999999999987543 456666888889999999999999
Q ss_pred cCCeEEEecChhhHH
Q 000997 382 SEGQIVYQGPRVSVL 396 (1194)
Q Consensus 382 ~~G~iv~~G~~~~~~ 396 (1194)
++|++++.|+.+++.
T Consensus 215 ~~G~i~~~~~~~~~~ 229 (254)
T PRK10418 215 SHGRIVEQGDVETLF 229 (254)
T ss_pred ECCEEEEecCHHHHh
Confidence 999999999987763
No 482
>TIGR03796 NHPM_micro_ABC1 NHPM bacteriocin system ABC transporter, peptidase/ATP-binding protein. This protein describes an multidomain ABC transporter subunit that is one of three protein families associated with some regularity with a distinctive family of putative bacteriocins. It includes a bacteriocin-processing peptidase domain at the N-terminus. Model TIGR03793 describes a conserved propeptide region for this bacteriocin family, unusual because it shows obvious homology a region of the enzyme nitrile hydratase up to the classic Gly-Gly cleavage motif. This family is therefore predicted to be a subunit of a bacteriocin processing and export system characteristic to this system that we designate NHPM, Nitrile Hydratase Propeptide Microcin.
Probab=100.00 E-value=5.7e-34 Score=362.77 Aligned_cols=209 Identities=30% Similarity=0.406 Sum_probs=173.8
Q ss_pred eeEeecceeeeecccccccccccccceEEeeeeeEEEeCCcEEEEEccCCCChHHHHhhhcCCCCCCeeEEEEEEcCccC
Q 000997 816 SMAFGNINYFVDVPVELKQEGVLEDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPK 895 (1194)
Q Consensus 816 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 895 (1194)
.++++|++|.++. .++.+|+|+|++|+|||.+||+|+||||||||+++|+|..+ +.+|+|.+||.++
T Consensus 477 ~I~~~~vsf~y~~-----------~~~~vL~~isl~i~~Ge~vaIvG~sGsGKSTLlklL~gl~~--p~~G~I~idg~~i 543 (710)
T TIGR03796 477 YVELRNITFGYSP-----------LEPPLIENFSLTLQPGQRVALVGGSGSGKSTIAKLVAGLYQ--PWSGEILFDGIPR 543 (710)
T ss_pred eEEEEEEEEecCC-----------CCCCcccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCcEEEECCEeH
Confidence 5788999887731 23569999999999999999999999999999999999876 5689999999986
Q ss_pred C---hhcccceeeEeecCCCCCCCCcHHHHHHHHhhhcCCCcCcHHHHHHHHHHHHHHcCCCcc-------cCCcccCCC
Q 000997 896 R---QETFARISGYCEQNDIHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSL-------SGALIGLPG 965 (1194)
Q Consensus 896 ~---~~~~~~~~gyv~Q~~~~~~~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~-------~~~~~~~~~ 965 (1194)
. ...+++.+|||+|++.++.. |++||+.++. + +.+. +.++++++..++.+. .|+.++..
T Consensus 544 ~~~~~~~lr~~i~~v~Q~~~lf~g-Ti~eNi~l~~----~-~~~~----~~i~~al~~~~l~~~i~~lp~gl~t~i~e~- 612 (710)
T TIGR03796 544 EEIPREVLANSVAMVDQDIFLFEG-TVRDNLTLWD----P-TIPD----ADLVRACKDAAIHDVITSRPGGYDAELAEG- 612 (710)
T ss_pred HHCCHHHHHhheeEEecCChhhhc-cHHHHhhCCC----C-CCCH----HHHHHHHHHhCCHHHHHhCcCcccceeccC-
Confidence 4 34578899999999998864 9999997641 1 2222 345677777776543 24455543
Q ss_pred CCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCeEEEEccC
Q 000997 966 INGLSTEQRKRLTIAVELVANPSIVFMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRG 1045 (1194)
Q Consensus 966 ~~~LSgGqrqrl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~g 1045 (1194)
..+||||||||++|||||+++|+||+||||||+||+.+...+++.|++ .++|+|++||+++ ....+|++++|+ +
T Consensus 613 G~~LSGGQrQRiaLARall~~p~iliLDEptS~LD~~te~~i~~~l~~---~~~T~IiitHrl~--~i~~~D~Iivl~-~ 686 (710)
T TIGR03796 613 GANLSGGQRQRLEIARALVRNPSILILDEATSALDPETEKIIDDNLRR---RGCTCIIVAHRLS--TIRDCDEIIVLE-R 686 (710)
T ss_pred CCCCCHHHHHHHHHHHHHhhCCCEEEEECccccCCHHHHHHHHHHHHh---cCCEEEEEecCHH--HHHhCCEEEEEe-C
Confidence 367999999999999999999999999999999999999999999986 4899999999975 457799999998 5
Q ss_pred cEEEEeCCC
Q 000997 1046 GELIYAGPL 1054 (1194)
Q Consensus 1046 G~~~~~g~~ 1054 (1194)
|+++..|+.
T Consensus 687 G~i~~~G~~ 695 (710)
T TIGR03796 687 GKVVQRGTH 695 (710)
T ss_pred CEEEEecCH
Confidence 899999984
No 483
>PRK14260 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.4e-33 Score=310.49 Aligned_cols=206 Identities=22% Similarity=0.277 Sum_probs=165.4
Q ss_pred eeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCc--eeeEEEECCccCCCC-----CCCceEEEEecCCCCC
Q 000997 149 TILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQ--VSGKITYNGHGFKEF-----VPPRTSAYVSQQDWQV 221 (1194)
Q Consensus 149 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~--~~G~i~~~G~~~~~~-----~~~~~~~yv~Q~d~~~ 221 (1194)
++|+|+|+++++||+++|+|+|||||||||++|+|.+++..+ .+|+|.++|.++... ..++.++|++|++.++
T Consensus 21 ~il~~isl~i~~Ge~~~l~G~nGsGKSTLlk~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~i~~v~q~~~l~ 100 (259)
T PRK14260 21 KAIEGISMDIYRNKVTAIIGPSGCGKSTFIKTLNRISELEGPVKVEGVVDFFGQNIYDPRININRLRRQIGMVFQRPNPF 100 (259)
T ss_pred EeecceEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcCcccCCccceEEEECCEeccccccchHhhhhheEEEecccccC
Confidence 599999999999999999999999999999999999875312 489999999876431 1235799999999888
Q ss_pred CCCCHHHHHHHhhhccCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhccCcchhHHHHHHHHHhCCc----ccccc
Q 000997 222 AEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLD----TCADT 297 (1194)
Q Consensus 222 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~k~~~~~~~~~~~~~~~~l~~lgL~----~~~dt 297 (1194)
+ +||+||+.++....+... +. .....++.+++.+|+. +..++
T Consensus 101 ~-~tv~enl~~~~~~~~~~~-------------------~~--------------~~~~~~~~~l~~~~l~~~l~~~~~~ 146 (259)
T PRK14260 101 P-MSIYENVAYGVRISAKLP-------------------QA--------------DLDEIVESALKGAALWQEVKDKLNK 146 (259)
T ss_pred C-ccHHHHHHHHHHHhcCCC-------------------HH--------------HHHHHHHHHHHHcCCcchhhhHhcC
Confidence 7 899999987643221000 00 0112355677777774 23333
Q ss_pred cccCccCCCCChhhhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCe
Q 000997 298 LVGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDD 377 (1194)
Q Consensus 298 ~vg~~~~~~LSGGqkqRvsia~al~~~~~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~ 377 (1194)
....|||||||||+||+||+.+|++++|||||+|||+.+...+.+.|+++.. + .+|+.++|..+++.+++|+
T Consensus 147 -----~~~~LS~G~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~--~-~tiii~tH~~~~i~~~~d~ 218 (259)
T PRK14260 147 -----SALGLSGGQQQRLCIARALAIKPKVLLMDEPCSALDPIATMKVEELIHSLRS--E-LTIAIVTHNMQQATRVSDF 218 (259)
T ss_pred -----CcccCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhc--C-CEEEEEeCCHHHHHHhcCe
Confidence 3457999999999999999999999999999999999999999999998853 3 5666688999999999999
Q ss_pred EEEEc-----CCeEEEecChhhHH
Q 000997 378 VILLS-----EGQIVYQGPRVSVL 396 (1194)
Q Consensus 378 vilL~-----~G~iv~~G~~~~~~ 396 (1194)
+++|+ +|+++++|+++++.
T Consensus 219 i~~l~~~~~~~G~i~~~~~~~~~~ 242 (259)
T PRK14260 219 TAFFSTDESRIGQMVEFGVTTQIF 242 (259)
T ss_pred EEEEeccCCCCceEEEeCCHHHHh
Confidence 99998 59999999988763
No 484
>PRK10790 putative multidrug transporter membrane\ATP-binding components; Provisional
Probab=100.00 E-value=1.6e-33 Score=351.51 Aligned_cols=210 Identities=25% Similarity=0.376 Sum_probs=176.3
Q ss_pred ceeEeecceeeeecccccccccccccceEEeeeeeEEEeCCcEEEEEccCCCChHHHHhhhcCCCCCCeeEEEEEEcCcc
Q 000997 815 LSMAFGNINYFVDVPVELKQEGVLEDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYP 894 (1194)
Q Consensus 815 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~ 894 (1194)
..++++|++|.++ +++.+|+|+|++++|||++||+|+||||||||+++|+|..+ +.+|+|.+||.+
T Consensus 339 ~~i~~~~v~f~y~------------~~~~il~~i~l~i~~Ge~iaIvG~SGsGKSTLl~lL~gl~~--p~~G~I~idg~~ 404 (592)
T PRK10790 339 GRIDIDNVSFAYR------------DDNLVLQNINLSVPSRGFVALVGHTGSGKSTLASLLMGYYP--LTEGEIRLDGRP 404 (592)
T ss_pred CeEEEEEEEEEeC------------CCCceeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhcccC--CCCceEEECCEE
Confidence 3588889888763 12359999999999999999999999999999999999877 468999999987
Q ss_pred CC---hhcccceeeEeecCCCCCCCCcHHHHHHHHhhhcCCCcCcHHHHHHHHHHHHHHcCCCccc-------CCcccCC
Q 000997 895 KR---QETFARISGYCEQNDIHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLS-------GALIGLP 964 (1194)
Q Consensus 895 ~~---~~~~~~~~gyv~Q~~~~~~~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~-------~~~~~~~ 964 (1194)
+. ...+++.++||+|++.++++ |++||+.++. +.+ ++.++++++.+++.+.. |+.++..
T Consensus 405 i~~~~~~~l~~~i~~v~Q~~~lF~~-Ti~~NI~~~~------~~~----d~~i~~a~~~~gl~~~i~~lp~Gldt~i~e~ 473 (592)
T PRK10790 405 LSSLSHSVLRQGVAMVQQDPVVLAD-TFLANVTLGR------DIS----EEQVWQALETVQLAELARSLPDGLYTPLGEQ 473 (592)
T ss_pred hhhCCHHHHHhheEEEccCCccccc-hHHHHHHhCC------CCC----HHHHHHHHHHcCcHHHHHhccccccccccCC
Confidence 64 35678899999999999986 9999998752 112 23467788888876433 4445443
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCeEEEEcc
Q 000997 965 GINGLSTEQRKRLTIAVELVANPSIVFMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKR 1044 (1194)
Q Consensus 965 ~~~~LSgGqrqrl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~ 1044 (1194)
...||||||||++|||||+++|+||+||||||+||+.+...|.+.|+++. .++|||++||+++ ....||++++|+
T Consensus 474 -g~~LSGGqrQRialARaLl~~~~illlDEpts~LD~~t~~~i~~~l~~~~-~~~tvIivtHr~~--~l~~~D~ii~l~- 548 (592)
T PRK10790 474 -GNNLSVGQKQLLALARVLVQTPQILILDEATANIDSGTEQAIQQALAAVR-EHTTLVVIAHRLS--TIVEADTILVLH- 548 (592)
T ss_pred -CCCCCHHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHh-CCCEEEEEecchH--HHHhCCEEEEEE-
Confidence 35799999999999999999999999999999999999999999999975 4799999999975 566799999998
Q ss_pred CcEEEEeCCC
Q 000997 1045 GGELIYAGPL 1054 (1194)
Q Consensus 1045 gG~~~~~g~~ 1054 (1194)
+|+++..|+.
T Consensus 549 ~G~i~~~G~~ 558 (592)
T PRK10790 549 RGQAVEQGTH 558 (592)
T ss_pred CCEEEEEcCH
Confidence 5899999985
No 485
>cd03297 ABC_ModC_molybdenum_transporter ModC is an ABC-type transporter and the ATPase component of a molybdate transport system that also includes the periplasmic binding protein ModA and the membrane protein ModB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.2e-33 Score=303.50 Aligned_cols=192 Identities=27% Similarity=0.404 Sum_probs=160.9
Q ss_pred cceEeEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCceeeEEEECCccCCCC-------CCCceEEEEecCCCCCCCCC
Q 000997 153 DLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEF-------VPPRTSAYVSQQDWQVAEMT 225 (1194)
Q Consensus 153 ~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~-------~~~~~~~yv~Q~d~~~~~lT 225 (1194)
|+|+++++ ++++|+|||||||||||++|+|.++|. +|+|.++|.++... ..++.++|++|++.+++.+|
T Consensus 16 ~vsl~i~~-e~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~t 91 (214)
T cd03297 16 KIDFDLNE-EVTGIFGASGAGKSTLLRCIAGLEKPD---GGTIVLNGTVLFDSRKKINLPPQQRKIGLVFQQYALFPHLN 91 (214)
T ss_pred CceEEEcc-eeEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEecccccchhhhhhHhhcEEEEecCCccCCCCC
Confidence 99999999 999999999999999999999999876 99999999876421 12457999999999899999
Q ss_pred HHHHHHHhhhccCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhccCcchhHHHHHHHHHhCCcccccccccCccCC
Q 000997 226 VRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEMLK 305 (1194)
Q Consensus 226 V~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~k~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~ 305 (1194)
|+||+.+..... . . . ..+..++.+++.+||++..++.+ .
T Consensus 92 ~~~~l~~~~~~~---~--~---~----------------------------~~~~~~~~~l~~~~l~~~~~~~~-----~ 130 (214)
T cd03297 92 VRENLAFGLKRK---R--N---R----------------------------EDRISVDELLDLLGLDHLLNRYP-----A 130 (214)
T ss_pred HHHHHHHHHhhC---C--H---H----------------------------HHHHHHHHHHHHcCCHhHhhcCc-----c
Confidence 999998753211 0 0 0 00123677889999987666554 4
Q ss_pred CCChhhhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEcCCe
Q 000997 306 GISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEGQ 385 (1194)
Q Consensus 306 ~LSGGqkqRvsia~al~~~~~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~~G~ 385 (1194)
.|||||||||+||+|++.+|++++|||||+|||+.++..+.+.|++++... +++|+.++|+.+++.+++|++++|++|+
T Consensus 131 ~LS~G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~-~~tiii~sH~~~~~~~~~d~i~~l~~G~ 209 (214)
T cd03297 131 QLSGGEKQRVALARALAAQPELLLLDEPFSALDRALRLQLLPELKQIKKNL-NIPVIFVTHDLSEAEYLADRIVVMEDGR 209 (214)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHc-CcEEEEEecCHHHHHHhcCEEEEEECCE
Confidence 699999999999999999999999999999999999999999999987543 4556668889999999999999999999
Q ss_pred EEEec
Q 000997 386 IVYQG 390 (1194)
Q Consensus 386 iv~~G 390 (1194)
++..|
T Consensus 210 i~~~g 214 (214)
T cd03297 210 LQYIG 214 (214)
T ss_pred EEecC
Confidence 98765
No 486
>PRK14265 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.7e-33 Score=312.93 Aligned_cols=228 Identities=20% Similarity=0.266 Sum_probs=177.4
Q ss_pred HhcCCCCCCceEEEeeeEEEEEEecCCCCCCChhHHHHHHHHHHHHHHhHhcCCCcceeeeecceEeEeCCeEEEEEcCC
Q 000997 91 EAVDLELPKIEVRFQNLTVESFVHLGSRALPTIPNFIFNMTEALLRQLRIYRGNRSKLTILDDLSGIIRPSRLTLLLGPP 170 (1194)
Q Consensus 91 ~~~~~~~p~~~v~~~~l~v~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~llGp~ 170 (1194)
|...+..+..-++++|+++.- . .+++|+|+|+.|++||+++|+|||
T Consensus 10 ~~~~~~~~~~~l~~~nl~~~~-------------------------------~---~~~~l~~vs~~i~~Ge~~~IiG~n 55 (274)
T PRK14265 10 DSATINPDHSVFEVEGVKVFY-------------------------------G---GFLALVDVHLKIPAKKIIAFIGPS 55 (274)
T ss_pred cccccCCCCceEEEeeEEEEe-------------------------------C---CeEEEeeeeeEEcCCCEEEEECCC
Confidence 345566666678888887542 1 135999999999999999999999
Q ss_pred CCcHHHHHHHHhcCcCCCC--ceeeEEEECCccCCCC-----CCCceEEEEecCCCCCCCCCHHHHHHHhhhccCCCCch
Q 000997 171 SSGKTTLLLALAGRLGHHL--QVSGKITYNGHGFKEF-----VPPRTSAYVSQQDWQVAEMTVRETLDFAGQCQGVGSKY 243 (1194)
Q Consensus 171 GsGKSTLL~~L~G~l~~~~--~~~G~i~~~G~~~~~~-----~~~~~~~yv~Q~d~~~~~lTV~E~l~f~~~~~~~~~~~ 243 (1194)
||||||||++|+|.+++.. ..+|+|.++|.++... ..++.++|++|++.+++. ||.||+.++....+...
T Consensus 56 GsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~l~~~~~~~~~~~~~i~~v~q~~~l~~~-tv~~nl~~~~~~~~~~~-- 132 (274)
T PRK14265 56 GCGKSTLLRCFNRMNDLIPGAKVEGRLLYRDRNIYDSQINSVKLRRQVGMVFQRPNPFPK-SIYENIAFAPRANGYKG-- 132 (274)
T ss_pred CCCHHHHHHHHhcccccccCCCcCceEEECCEecccccchhHHHhhcEEEEccCCccccc-cHHHHHHhHHHhcCchH--
Confidence 9999999999999975321 2489999999876431 124679999999887764 99999987543221000
Q ss_pred hhhHHHHHHHHHhCCCCCchHHHHHHHhhccCcchhHHHHHHHHHhCCc----ccccccccCccCCCCChhhhhHHHHHH
Q 000997 244 DMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLD----TCADTLVGDEMLKGISGGQKKRLTTGE 319 (1194)
Q Consensus 244 ~~~~~~~~~e~~~~~~~~~d~~~~~k~~~~~~~~~~~~~~~~l~~lgL~----~~~dt~vg~~~~~~LSGGqkqRvsia~ 319 (1194)
. .+..++..++.+||. +..++ .+..|||||||||+||+
T Consensus 133 ----~-----------------------------~~~~~~~~l~~~~l~~~l~~~~~~-----~~~~LSgGq~qrv~LAr 174 (274)
T PRK14265 133 ----N-----------------------------LDELVEDSLRRAAIWEEVKDKLKE-----KGTALSGGQQQRLCIAR 174 (274)
T ss_pred ----H-----------------------------HHHHHHHHHHHcccchhhHHHhcC-----CcccCCHHHHHHHHHHH
Confidence 0 001134456666653 22233 34579999999999999
Q ss_pred HHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEc---------CCeEEEec
Q 000997 320 LLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLS---------EGQIVYQG 390 (1194)
Q Consensus 320 al~~~~~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~---------~G~iv~~G 390 (1194)
||+.+|++|||||||+|||+.+...+.+.|+++.+ + ++|+.++|+.+++.+++|++++|+ +|++++.|
T Consensus 175 aL~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~--~-~tiii~sH~~~~~~~~~d~i~~l~~~~~~~~~~~G~~~~~g 251 (274)
T PRK14265 175 AIAMKPDVLLMDEPCSALDPISTRQVEELCLELKE--Q-YTIIMVTHNMQQASRVADWTAFFNTEIDEYGKRRGKLVEFS 251 (274)
T ss_pred HHhhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhc--C-CEEEEEeCCHHHHHHhCCEEEEEecccccccccCceEEEeC
Confidence 99999999999999999999999999999999853 3 566778899999999999999997 89999999
Q ss_pred ChhhHH
Q 000997 391 PRVSVL 396 (1194)
Q Consensus 391 ~~~~~~ 396 (1194)
+.+++.
T Consensus 252 ~~~~~~ 257 (274)
T PRK14265 252 PTEQMF 257 (274)
T ss_pred CHHHHH
Confidence 998874
No 487
>PRK14255 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=9.6e-33 Score=307.55 Aligned_cols=210 Identities=20% Similarity=0.270 Sum_probs=162.8
Q ss_pred eeeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHhcCcC--CCCceeeEEEECCccCCCC-----CCCceEEEEecCCCC
Q 000997 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLG--HHLQVSGKITYNGHGFKEF-----VPPRTSAYVSQQDWQ 220 (1194)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~--~~~~~~G~i~~~G~~~~~~-----~~~~~~~yv~Q~d~~ 220 (1194)
+++|+|+|++|++|++++|+|||||||||||++|+|..+ +....+|+|.++|.++... ..++.++|++|++.+
T Consensus 18 ~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~ 97 (252)
T PRK14255 18 FEALKGIDLDFNQNEITALIGPSGCGKSTYLRTLNRMNDLIPGVTITGNVSLRGQNIYAPNEDVVQLRKQVGMVFQQPNP 97 (252)
T ss_pred eeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCcccEEEEcCEEcccccccHHHhcCeEEEEECCCcc
Confidence 359999999999999999999999999999999999864 3212489999999876421 124679999999887
Q ss_pred CCCCCHHHHHHHhhhccCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhccCcchhHHHHHHHHHhCCccccccccc
Q 000997 221 VAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVG 300 (1194)
Q Consensus 221 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~k~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg 300 (1194)
++ .||+||+.+.....+.... +. ....+...++.+|+........
T Consensus 98 ~~-~tv~~nl~~~~~~~~~~~~-~~--------------------------------~~~~~~~~l~~~~l~~~i~~~~- 142 (252)
T PRK14255 98 FP-FSIYENVIYGLRLAGVKDK-AV--------------------------------LDEAVETSLKQAAIWDEVKDHL- 142 (252)
T ss_pred CC-CcHHHHHHHHHHHcCCCCH-HH--------------------------------HHHHHHHHHHHcCCccchhhHH-
Confidence 87 6999999886433221100 00 0112344566666532111111
Q ss_pred CccCCCCChhhhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEE
Q 000997 301 DEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVIL 380 (1194)
Q Consensus 301 ~~~~~~LSGGqkqRvsia~al~~~~~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vil 380 (1194)
+..+..|||||||||+||++|+.+|++|+|||||+|||+.++..+.+.|+++.+ + ++++.++|+..++.+.+|+|++
T Consensus 143 ~~~~~~LS~Gq~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~--~-~tii~vsH~~~~~~~~~d~i~~ 219 (252)
T PRK14255 143 HESALSLSGGQQQRVCIARVLAVKPDVILLDEPTSALDPISSTQIENMLLELRD--Q-YTIILVTHSMHQASRISDKTAF 219 (252)
T ss_pred hcCcccCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHh--C-CEEEEEECCHHHHHHhCCEEEE
Confidence 123456999999999999999999999999999999999999999999999864 3 4566688888999999999999
Q ss_pred EcCCeEEEecChhhH
Q 000997 381 LSEGQIVYQGPRVSV 395 (1194)
Q Consensus 381 L~~G~iv~~G~~~~~ 395 (1194)
|++|+++..|+..++
T Consensus 220 l~~G~i~~~~~~~~~ 234 (252)
T PRK14255 220 FLTGNLIEFADTKQM 234 (252)
T ss_pred EECCEEEEeCCHHHH
Confidence 999999999988765
No 488
>TIGR03269 met_CoM_red_A2 methyl coenzyme M reductase system, component A2. The enzyme that catalyzes the final step in methanogenesis, methyl coenzyme M reductase, contains alpha, beta, and gamma chains. In older literature, the complex of alpha, beta, and gamma chains was termed component C, while this single chain protein was termed methyl coenzyme M reductase system component A2.
Probab=100.00 E-value=2.6e-33 Score=343.91 Aligned_cols=205 Identities=25% Similarity=0.303 Sum_probs=168.0
Q ss_pred cceEEeeeeeEEEeCCcEEEEEccCCCChHHHHhhhcCCCCCCeeEEEEEEcC-----------------------ccC-
Q 000997 840 DRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISG-----------------------YPK- 895 (1194)
Q Consensus 840 ~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g-----------------------~~~- 895 (1194)
+++.+|+|+||++.+||++||+||||||||||+++|+|.....+.+|+|.++| .++
T Consensus 11 ~~~~~l~~is~~i~~Ge~~~iiG~nGsGKSTLl~~l~Gl~~~~p~~G~i~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~ 90 (520)
T TIGR03269 11 DGKEVLKNISFTIEEGEVLGILGRSGAGKSVLMHVLRGMDQYEPTSGRIIYHVALCEKCGYVERPSKVGEPCPVCGGTLE 90 (520)
T ss_pred CCeEeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhhcccCCCCceEEEEecccccccccccccccccccccccccccc
Confidence 34579999999999999999999999999999999999752114689999972 211
Q ss_pred ---------Ch---hcccceeeEeecC-CCCCCCCcHHHHHHHHhhhcCCCcCcHHHHHHHHHHHHHHcCCCcccCCccc
Q 000997 896 ---------RQ---ETFARISGYCEQN-DIHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIG 962 (1194)
Q Consensus 896 ---------~~---~~~~~~~gyv~Q~-~~~~~~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~ 962 (1194)
.. ...++.+||++|+ +.+++.+||+|++.|...... ....+.++++.++++.+++.+..+..+
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~i~~v~q~~~~~~~~~tv~~~l~~~~~~~~---~~~~~~~~~~~~~l~~~gl~~~~~~~~- 166 (520)
T TIGR03269 91 PEEVDFWNLSDKLRRRIRKRIAIMLQRTFALYGDDTVLDNVLEALEEIG---YEGKEAVGRAVDLIEMVQLSHRITHIA- 166 (520)
T ss_pred ccchhhhccCHHHHHHhhhcEEEEeccccccCCCCCHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCChhhhhcCc-
Confidence 00 1234568999997 677888999999998654321 223344567889999999987766543
Q ss_pred CCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCCcHHHHHhcCeEEE
Q 000997 963 LPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSGLDARAAAIVMRTVRNIVN-TGRTIVCTIHQPSIDIFESFDELLF 1041 (1194)
Q Consensus 963 ~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~l~~-~g~tvi~~~H~~~~~~~~~~d~~~~ 1041 (1194)
..|||||||||+||+||+.+|++|||||||+|||+.++..+++.|+++++ .|.|||+++|+++ .+.+.||++++
T Consensus 167 ----~~LSgGq~qrv~iA~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~~g~tviivtHd~~-~~~~~~d~i~~ 241 (520)
T TIGR03269 167 ----RDLSGGEKQRVVLARQLAKEPFLFLADEPTGTLDPQTAKLVHNALEEAVKASGISMVLTSHWPE-VIEDLSDKAIW 241 (520)
T ss_pred ----ccCCHHHHHHHHHHHHHhcCCCEEEeeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHH-HHHHhcCEEEE
Confidence 58999999999999999999999999999999999999999999999965 4999999999986 46678999999
Q ss_pred EccCcEEEEeCCC
Q 000997 1042 MKRGGELIYAGPL 1054 (1194)
Q Consensus 1042 l~~gG~~~~~g~~ 1054 (1194)
|++ |++++.|+.
T Consensus 242 l~~-G~i~~~g~~ 253 (520)
T TIGR03269 242 LEN-GEIKEEGTP 253 (520)
T ss_pred EeC-CEEeeecCH
Confidence 985 788888865
No 489
>cd03217 ABC_FeS_Assembly ABC-type transport system involved in Fe-S cluster assembly, ATPase component. Biosynthesis of iron-sulfur clusters (Fe-S) depends on multiprotein systems. The SUF system of E. coli and Erwinia chrysanthemi is important for Fe-S biogenesis under stressful conditions. The SUF system is made of six proteins: SufC is an atypical cytoplasmic ABC-ATPase, which forms a complex with SufB and SufD; SufA plays the role of a scaffold protein for assembly of iron-sulfur clusters and delivery to target proteins; SufS is a cysteine desulfurase which mobilizes the sulfur atom from cysteine and provides it to the cluster; SufE has no associated function yet.
Probab=100.00 E-value=2.3e-33 Score=300.93 Aligned_cols=173 Identities=24% Similarity=0.332 Sum_probs=146.7
Q ss_pred ceEEeeeeeEEEeCCcEEEEEccCCCChHHHHhhhcCCCCCCeeEEEEEEcCccCChh---cc-cceeeEeecCCCCCCC
Q 000997 841 RLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQE---TF-ARISGYCEQNDIHSPG 916 (1194)
Q Consensus 841 ~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~---~~-~~~~gyv~Q~~~~~~~ 916 (1194)
++.+|+|+||++++||++||+|+||||||||+++|+|.....+.+|+|.++|.++... .. ++.++|++|++.+++.
T Consensus 12 ~~~~l~~is~~i~~Ge~~~i~G~nGsGKStLl~~l~G~~~~~p~~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~ 91 (200)
T cd03217 12 GKEILKGVNLTIKKGEVHALMGPNGSGKSTLAKTIMGHPKYEVTEGEILFKGEDITDLPPEERARLGIFLAFQYPPEIPG 91 (200)
T ss_pred CEEeeeccceEECCCcEEEEECCCCCCHHHHHHHHhCCCcCCCCccEEEECCEECCcCCHHHHhhCcEEEeecChhhccC
Confidence 4579999999999999999999999999999999999842114689999999876431 22 3459999999888888
Q ss_pred CcHHHHHHHHhhhcCCCcCcHHHHHHHHHHHHHHcCCCcccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCC
Q 000997 917 LTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPT 996 (1194)
Q Consensus 917 lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEPT 996 (1194)
.|+++++. .. ...||||||||++|||+|+.+|++|+|||||
T Consensus 92 ~~~~~~l~----------------------------------~~-----~~~LS~G~~qrv~laral~~~p~illlDEPt 132 (200)
T cd03217 92 VKNADFLR----------------------------------YV-----NEGFSGGEKKRNEILQLLLLEPDLAILDEPD 132 (200)
T ss_pred ccHHHHHh----------------------------------hc-----cccCCHHHHHHHHHHHHHhcCCCEEEEeCCC
Confidence 88877650 00 1369999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHH-hcCeEEEEccCcEEEEeCCC
Q 000997 997 SGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFE-SFDELLFMKRGGELIYAGPL 1054 (1194)
Q Consensus 997 sgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~-~~d~~~~l~~gG~~~~~g~~ 1054 (1194)
+|||+.++..+.+.|++++++|+|||+++|+++ .+.+ .+|++++|.+ |+++..|+.
T Consensus 133 ~~LD~~~~~~l~~~L~~~~~~~~tiii~sh~~~-~~~~~~~d~i~~l~~-G~i~~~~~~ 189 (200)
T cd03217 133 SGLDIDALRLVAEVINKLREEGKSVLIITHYQR-LLDYIKPDRVHVLYD-GRIVKSGDK 189 (200)
T ss_pred ccCCHHHHHHHHHHHHHHHHCCCEEEEEecCHH-HHHHhhCCEEEEEEC-CEEEEEccH
Confidence 999999999999999999877999999999976 3444 6999999984 789988853
No 490
>PRK14271 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.2e-33 Score=312.69 Aligned_cols=211 Identities=23% Similarity=0.304 Sum_probs=168.8
Q ss_pred eeeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCC--CceeeEEEECCccCCCCC----CCceEEEEecCCCCC
Q 000997 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHH--LQVSGKITYNGHGFKEFV----PPRTSAYVSQQDWQV 221 (1194)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~--~~~~G~i~~~G~~~~~~~----~~~~~~yv~Q~d~~~ 221 (1194)
+++|+|+|++|++||+++|+|||||||||||++|+|.++|. .+.+|+|.++|.++.+.. .++.++|++|++.++
T Consensus 34 ~~il~~vs~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~p~~~~~~~G~i~~~g~~i~~~~~~~~~~~~i~~v~q~~~l~ 113 (276)
T PRK14271 34 KTVLDQVSMGFPARAVTSLMGPTGSGKTTFLRTLNRMNDKVSGYRYSGDVLLGGRSIFNYRDVLEFRRRVGMLFQRPNPF 113 (276)
T ss_pred EEEeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhccCCcCCCCCCceEEEECCEEccccchhHHHhhheEEeccCCccC
Confidence 36999999999999999999999999999999999998751 124899999998875431 246799999998878
Q ss_pred CCCCHHHHHHHhhhccCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhccCcchhHHHHHHHHHhCCcccccccccC
Q 000997 222 AEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGD 301 (1194)
Q Consensus 222 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~k~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 301 (1194)
+ +||+||+.+......... .. +....+..+++.+||.+..++.. +
T Consensus 114 ~-~tv~eni~~~~~~~~~~~-------------------~~--------------~~~~~~~~~l~~~~l~~~~~~~l-~ 158 (276)
T PRK14271 114 P-MSIMDNVLAGVRAHKLVP-------------------RK--------------EFRGVAQARLTEVGLWDAVKDRL-S 158 (276)
T ss_pred C-ccHHHHHHHHHHhccCCC-------------------HH--------------HHHHHHHHHHHHcCCCchhhhHh-h
Confidence 7 899999987542211000 00 01123566788888875432222 1
Q ss_pred ccCCCCChhhhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEE
Q 000997 302 EMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILL 381 (1194)
Q Consensus 302 ~~~~~LSGGqkqRvsia~al~~~~~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL 381 (1194)
..+..|||||||||+|||+|+.+|++++|||||+|||+.+...+.+.|+++.+ + ++|+.++|..+++.+++|++++|
T Consensus 159 ~~~~~LSgGq~qrl~LAral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~--~-~tiiivsH~~~~~~~~~dri~~l 235 (276)
T PRK14271 159 DSPFRLSGGQQQLLCLARTLAVNPEVLLLDEPTSALDPTTTEKIEEFIRSLAD--R-LTVIIVTHNLAQAARISDRAALF 235 (276)
T ss_pred CCcccCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhc--C-CEEEEEeCCHHHHHHhCCEEEEE
Confidence 33457999999999999999999999999999999999999999999998864 3 56666889999999999999999
Q ss_pred cCCeEEEecChhhHH
Q 000997 382 SEGQIVYQGPRVSVL 396 (1194)
Q Consensus 382 ~~G~iv~~G~~~~~~ 396 (1194)
++|++++.|+.+++.
T Consensus 236 ~~G~i~~~g~~~~~~ 250 (276)
T PRK14271 236 FDGRLVEEGPTEQLF 250 (276)
T ss_pred ECCEEEEeCCHHHHH
Confidence 999999999988774
No 491
>TIGR02324 CP_lyasePhnL phosphonate C-P lyase system protein PhnL. Members of this family are the PhnL protein of C-P lyase systems for utilization of phosphonates. These systems resemble phosphonatase-based systems in having a three component ABC transporter, where TIGR01097 is the permease, TIGR01098 is the phosphonates binding protein, and TIGR02315 is the ATP-binding cassette (ABC) protein. They differ, however, in having, typically, ten or more additional genes, many of which are believed to form a membrane-associated C-P lysase complex. This protein (PhnL) and the adjacent-encoded PhnK (TIGR02323) resemble transporter ATP-binding proteins but are suggested, based on mutatgenesis studies, to be part of this C-P lyase complex rather than part of a transporter per se.
Probab=100.00 E-value=2.9e-33 Score=306.18 Aligned_cols=191 Identities=25% Similarity=0.297 Sum_probs=156.6
Q ss_pred eEEeeeeeEEEeCCcEEEEEccCCCChHHHHhhhcCCCCCCeeEEEEEEc--Cc--cCCh---hc----ccceeeEeecC
Q 000997 842 LQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYIS--GY--PKRQ---ET----FARISGYCEQN 910 (1194)
Q Consensus 842 ~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~--g~--~~~~---~~----~~~~~gyv~Q~ 910 (1194)
+.+|+|+||+|++||+++|+|+||||||||+++|+|..+ +.+|+|.++ |. ++.. .. .++.+||++|+
T Consensus 21 ~~il~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~--~~~G~i~~~~~g~~~~~~~~~~~~~~~~~~~~i~~~~q~ 98 (224)
T TIGR02324 21 LPVLKNVSLTVNAGECVALSGPSGAGKSTLLKSLYANYL--PDSGRILVRHEGAWVDLAQASPREVLEVRRKTIGYVSQF 98 (224)
T ss_pred eEEEecceEEECCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCCeEEEecCCCccchhhcCHHHHHHHHhcceEEEecc
Confidence 579999999999999999999999999999999999866 458999998 42 3211 11 23568999999
Q ss_pred CCCCCCCcHHHHHHHHhhhcCCCcCcHHHHHHHHHHHHHHcCCCcc-cCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCE
Q 000997 911 DIHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSL-SGALIGLPGINGLSTEQRKRLTIAVELVANPSI 989 (1194)
Q Consensus 911 ~~~~~~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~-~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~i 989 (1194)
+.+++.+|++|++.+..... ........+.+.++++.+++.+. .+.. +.+||||||||++||++|+.+|++
T Consensus 99 ~~~~~~~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~~LS~G~~qrl~laral~~~p~l 170 (224)
T TIGR02324 99 LRVIPRVSALEVVAEPLLER---GVPREAARARARELLARLNIPERLWHLP-----PATFSGGEQQRVNIARGFIADYPI 170 (224)
T ss_pred cccCCCccHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCchhhhhCC-----cccCCHHHHHHHHHHHHHhcCCCE
Confidence 98999999999998764322 12223334567888999998652 3332 358999999999999999999999
Q ss_pred EEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCeEEEEc
Q 000997 990 VFMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMK 1043 (1194)
Q Consensus 990 llLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~~d~~~~l~ 1043 (1194)
|+|||||+|||+.++..+.+.|+++.++|+|||+++|++. .+...+|+++.+.
T Consensus 171 lllDEPt~~LD~~~~~~l~~~l~~~~~~g~tii~vsH~~~-~~~~~~d~i~~~~ 223 (224)
T TIGR02324 171 LLLDEPTASLDAANRQVVVELIAEAKARGAALIGIFHDEE-VRELVADRVMDVT 223 (224)
T ss_pred EEEcCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhcceeEecC
Confidence 9999999999999999999999999877999999999964 3556799998764
No 492
>PRK11160 cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed
Probab=100.00 E-value=1.1e-33 Score=350.49 Aligned_cols=212 Identities=25% Similarity=0.414 Sum_probs=176.7
Q ss_pred ceeEeecceeeeecccccccccccccceEEeeeeeEEEeCCcEEEEEccCCCChHHHHhhhcCCCCCCeeEEEEEEcCcc
Q 000997 815 LSMAFGNINYFVDVPVELKQEGVLEDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYP 894 (1194)
Q Consensus 815 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~ 894 (1194)
..++++|+++.++. +++.+|+|+|++++|||++||+||||||||||+++|+|..+ +.+|+|.+||.+
T Consensus 337 ~~i~~~~v~f~y~~-----------~~~~il~~i~~~i~~G~~~aivG~sGsGKSTL~~ll~g~~~--p~~G~I~i~g~~ 403 (574)
T PRK11160 337 VSLTLNNVSFTYPD-----------QPQPVLKGLSLQIKAGEKVALLGRTGCGKSTLLQLLTRAWD--PQQGEILLNGQP 403 (574)
T ss_pred CeEEEEEEEEECCC-----------CCCcceecceEEECCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCceEEECCEE
Confidence 36889999887631 12469999999999999999999999999999999999876 568999999988
Q ss_pred CCh---hcccceeeEeecCCCCCCCCcHHHHHHHHhhhcCCCcCcHHHHHHHHHHHHHHcCCCccc------CCcccCCC
Q 000997 895 KRQ---ETFARISGYCEQNDIHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLS------GALIGLPG 965 (1194)
Q Consensus 895 ~~~---~~~~~~~gyv~Q~~~~~~~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~------~~~~~~~~ 965 (1194)
+.+ ..+++.++||+|++.+++. |++||+.++. + +. .++.++++++.+++.+.. |+.+|..
T Consensus 404 i~~~~~~~~r~~i~~v~Q~~~lf~~-ti~~Ni~~~~----~-~~----~~~~i~~al~~~~l~~~i~~p~GldT~vge~- 472 (574)
T PRK11160 404 IADYSEAALRQAISVVSQRVHLFSA-TLRDNLLLAA----P-NA----SDEALIEVLQQVGLEKLLEDDKGLNAWLGEG- 472 (574)
T ss_pred hhhCCHHHHHhheeEEcccchhhcc-cHHHHhhcCC----C-cc----CHHHHHHHHHHcCCHHHHcCccccCchhcCC-
Confidence 643 4567889999999988865 9999998752 1 11 224567888888887653 3444433
Q ss_pred CCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCeEEEEccC
Q 000997 966 INGLSTEQRKRLTIAVELVANPSIVFMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRG 1045 (1194)
Q Consensus 966 ~~~LSgGqrqrl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~g 1045 (1194)
...||||||||++|||||+++|+||+||||||+||+.++..+++.|+++. +++|+|+++|+++ ....+|++++|+ +
T Consensus 473 g~~LSgGqrqRialARall~~~~ililDE~ts~lD~~t~~~i~~~l~~~~-~~~tviiitHr~~--~~~~~d~i~~l~-~ 548 (574)
T PRK11160 473 GRQLSGGEQRRLGIARALLHDAPLLLLDEPTEGLDAETERQILELLAEHA-QNKTVLMITHRLT--GLEQFDRICVMD-N 548 (574)
T ss_pred CCCCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHc-CCCEEEEEecChh--HHHhCCEEEEEe-C
Confidence 45799999999999999999999999999999999999999999999985 5899999999986 346799999998 4
Q ss_pred cEEEEeCCC
Q 000997 1046 GELIYAGPL 1054 (1194)
Q Consensus 1046 G~~~~~g~~ 1054 (1194)
|+++..|+.
T Consensus 549 G~i~~~g~~ 557 (574)
T PRK11160 549 GQIIEQGTH 557 (574)
T ss_pred CeEEEeCCH
Confidence 899998874
No 493
>PRK14236 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=9.8e-33 Score=310.40 Aligned_cols=209 Identities=22% Similarity=0.291 Sum_probs=166.2
Q ss_pred eeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCC--CceeeEEEECCccCCCC-----CCCceEEEEecCCCCC
Q 000997 149 TILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHH--LQVSGKITYNGHGFKEF-----VPPRTSAYVSQQDWQV 221 (1194)
Q Consensus 149 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~--~~~~G~i~~~G~~~~~~-----~~~~~~~yv~Q~d~~~ 221 (1194)
++|+|+|+.|++|++++|+||||||||||+++|+|.+++. .+.+|+|.++|.++... ..++.++|++|++.++
T Consensus 39 ~il~~vs~~i~~Ge~~~I~G~nGsGKSTLl~~laGl~~~~~~~~~~G~i~i~g~~i~~~~~~~~~~~~~i~~v~q~~~l~ 118 (272)
T PRK14236 39 QALFDISMRIPKNRVTAFIGPSGCGKSTLLRCFNRMNDLVDNCRIEGEIRLDGQNIYDKKVDVAELRRRVGMVFQRPNPF 118 (272)
T ss_pred eEeeeEEEEEcCCCEEEEECCCCCCHHHHHHHHHhcCCCccCCCCceEEEECCEECcccccCHHHHhccEEEEecCCccC
Confidence 5999999999999999999999999999999999997631 13589999999887531 1246799999999888
Q ss_pred CCCCHHHHHHHhhhccCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhccCcchhHHHHHHHHHhCCcccccccccC
Q 000997 222 AEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGD 301 (1194)
Q Consensus 222 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~k~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 301 (1194)
+. ||+||+.+.....+... + + ..+..++++++.+||.....+.. +
T Consensus 119 ~~-tv~enl~~~~~~~~~~~--~---~----------------------------~~~~~~~~~l~~~~l~~~~~~~~-~ 163 (272)
T PRK14236 119 PK-SIYENVVYGLRLQGINN--R---R----------------------------VLDEAVERSLRGAALWDEVKDRL-H 163 (272)
T ss_pred cc-cHHHHHHHHHHhcCCCc--H---H----------------------------HHHHHHHHHHHHcCCChhHHHHh-h
Confidence 76 99999987643321100 0 0 00123566777788753211112 2
Q ss_pred ccCCCCChhhhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEE
Q 000997 302 EMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILL 381 (1194)
Q Consensus 302 ~~~~~LSGGqkqRvsia~al~~~~~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL 381 (1194)
...+.|||||||||+|||||+.+|++++|||||+|||+.+...+.+.|+++++ + .+++.++|..+++.+.+|+|++|
T Consensus 164 ~~~~~LS~Gq~qrv~laral~~~p~lllLDEPt~gLD~~~~~~l~~~L~~~~~--~-~tiiivtH~~~~~~~~~d~i~~l 240 (272)
T PRK14236 164 ENAFGLSGGQQQRLVIARAIAIEPEVLLLDEPTSALDPISTLKIEELITELKS--K-YTIVIVTHNMQQAARVSDYTAFM 240 (272)
T ss_pred CCcccCCHHHHHHHHHHHHHHCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHh--C-CeEEEEeCCHHHHHhhCCEEEEE
Confidence 33457999999999999999999999999999999999999999999999864 3 45666788889999999999999
Q ss_pred cCCeEEEecChhhH
Q 000997 382 SEGQIVYQGPRVSV 395 (1194)
Q Consensus 382 ~~G~iv~~G~~~~~ 395 (1194)
++|++++.|+.+++
T Consensus 241 ~~G~i~~~g~~~~~ 254 (272)
T PRK14236 241 YMGKLVEYGDTDTL 254 (272)
T ss_pred ECCEEEecCCHHHH
Confidence 99999999988765
No 494
>cd03213 ABCG_EPDR ABCG transporters are involved in eye pigment (EP) precursor transport, regulation of lipid-trafficking mechanisms, and pleiotropic drug resistance (DR). DR is a well-described phenomenon occurring in fungi and shares several similarities with processes in bacteria and higher eukaryotes. Compared to other members of the ABC transporter subfamilies, the ABCG transporter family is composed of proteins that have an ATP-binding cassette domain at the N-terminus and a TM (transmembrane) domain at the C-terminus.
Probab=100.00 E-value=6.4e-33 Score=295.92 Aligned_cols=170 Identities=38% Similarity=0.634 Sum_probs=147.2
Q ss_pred eeeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHhcCc--CCCCceeeEEEECCccCCCCCCCceEEEEecCCCCCCCCC
Q 000997 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRL--GHHLQVSGKITYNGHGFKEFVPPRTSAYVSQQDWQVAEMT 225 (1194)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l--~~~~~~~G~i~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lT 225 (1194)
.++|+|+|+++++|++++|+||||||||||+++|+|.+ ++. +|+|.++|+++.....++.++|++|++.+++.+|
T Consensus 22 ~~~l~~~~~~i~~Ge~~~l~G~nGsGKStLl~~i~Gl~~~~~~---~G~i~~~g~~~~~~~~~~~i~~~~q~~~~~~~~t 98 (194)
T cd03213 22 KQLLKNVSGKAKPGELTAIMGPSGAGKSTLLNALAGRRTGLGV---SGEVLINGRPLDKRSFRKIIGYVPQDDILHPTLT 98 (194)
T ss_pred ccceecceEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCC---ceEEEECCEeCchHhhhheEEEccCcccCCCCCc
Confidence 46999999999999999999999999999999999998 665 9999999998764334577999999998899999
Q ss_pred HHHHHHHhhhccCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhccCcchhHHHHHHHHHhCCcccccccccCccCC
Q 000997 226 VRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEMLK 305 (1194)
Q Consensus 226 V~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~k~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~ 305 (1194)
++||+.+..++ .
T Consensus 99 ~~~~i~~~~~~--------------------------------------------------------------------~ 110 (194)
T cd03213 99 VRETLMFAAKL--------------------------------------------------------------------R 110 (194)
T ss_pred HHHHHHHHHHh--------------------------------------------------------------------c
Confidence 99999763100 0
Q ss_pred CCChhhhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecCh-hHHHhhcCeEEEEcCC
Q 000997 306 GISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPA-PEAYELFDDVILLSEG 384 (1194)
Q Consensus 306 ~LSGGqkqRvsia~al~~~~~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~-~~~~~~~D~vilL~~G 384 (1194)
.|||||||||+||+||+.+|++++|||||+|||..++..+.+.|+++.+. +.|+|+ ++|.. .++.+++|++++|++|
T Consensus 111 ~LS~G~~qrv~laral~~~p~illlDEP~~~LD~~~~~~l~~~l~~~~~~-~~tiii-~sh~~~~~~~~~~d~v~~l~~G 188 (194)
T cd03213 111 GLSGGERKRVSIALELVSNPSLLFLDEPTSGLDSSSALQVMSLLRRLADT-GRTIIC-SIHQPSSEIFELFDKLLLLSQG 188 (194)
T ss_pred cCCHHHHHHHHHHHHHHcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHhC-CCEEEE-EecCchHHHHHhcCEEEEEeCC
Confidence 49999999999999999999999999999999999999999999988653 445444 55665 4788999999999999
Q ss_pred eEEEec
Q 000997 385 QIVYQG 390 (1194)
Q Consensus 385 ~iv~~G 390 (1194)
++++.|
T Consensus 189 ~i~~~~ 194 (194)
T cd03213 189 RVIYFG 194 (194)
T ss_pred EEEecC
Confidence 998765
No 495
>COG3845 ABC-type uncharacterized transport systems, ATPase components [General function prediction only]
Probab=100.00 E-value=3.8e-33 Score=316.04 Aligned_cols=247 Identities=24% Similarity=0.320 Sum_probs=198.7
Q ss_pred cccccccceEEeeeeeEEEeCCcEEEEEccCCCChHHHHhhhcCCCCCCeeEEEEEEcCccCCh----hcccceeeEeec
Q 000997 834 QEGVLEDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ----ETFARISGYCEQ 909 (1194)
Q Consensus 834 ~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~----~~~~~~~gyv~Q 909 (1194)
+.++.++...+++|||++|++||+.||+|.|||||||||++|.|... +.+|+|+++|+++.- ...+..||+|.|
T Consensus 9 ~itK~f~~~~And~V~l~v~~GeIHaLLGENGAGKSTLm~iL~G~~~--P~~GeI~v~G~~v~~~sP~dA~~~GIGMVhQ 86 (501)
T COG3845 9 GITKRFPGVVANDDVSLSVKKGEIHALLGENGAGKSTLMKILFGLYQ--PDSGEIRVDGKEVRIKSPRDAIRLGIGMVHQ 86 (501)
T ss_pred ccEEEcCCEEecCceeeeecCCcEEEEeccCCCCHHHHHHHHhCccc--CCcceEEECCEEeccCCHHHHHHcCCcEEee
Confidence 33444567889999999999999999999999999999999999877 579999999998632 345567999999
Q ss_pred CCCCCCCCcHHHHHHHHhhhcCCCcCcHHHHHHHHHHHHHHcCCCcccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCE
Q 000997 910 NDIHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSI 989 (1194)
Q Consensus 910 ~~~~~~~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~i 989 (1194)
+..+.|++||.||+..+..-............++++++.+..||.--.+..+ ..||.||||||.|-++|.++|++
T Consensus 87 HF~Lv~~lTV~ENiiLg~e~~~~~~~~~~~~~~~i~~l~~~yGl~vdp~~~V-----~dLsVG~qQRVEIlKaLyr~a~i 161 (501)
T COG3845 87 HFMLVPTLTVAENIILGLEPSKGGLIDRRQARARIKELSERYGLPVDPDAKV-----ADLSVGEQQRVEILKALYRGARL 161 (501)
T ss_pred ccccccccchhhhhhhcCccccccccCHHHHHHHHHHHHHHhCCCCCcccee-----ecCCcchhHHHHHHHHHhcCCCE
Confidence 9999999999999998764322223456667788999999999987777765 47999999999999999999999
Q ss_pred EEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCeEEEEccCcEEEEeCC-CCC-chhHHHHHHHh
Q 000997 990 VFMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGP-LGS-KSCELIKYFEA 1067 (1194)
Q Consensus 990 llLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~-~~~-~~~~~~~~f~~ 1067 (1194)
|+|||||+-|-|.....+++++++++++|+|||++||... ++.+.|||+-||.+ |+++-.-+ ..+ ...++.+-.-.
T Consensus 162 LILDEPTaVLTP~E~~~lf~~l~~l~~~G~tIi~ITHKL~-Ev~~iaDrvTVLR~-Gkvvgt~~~~~~~t~~ela~lMvG 239 (501)
T COG3845 162 LILDEPTAVLTPQEADELFEILRRLAAEGKTIIFITHKLK-EVMAIADRVTVLRR-GKVVGTVDPVAETTEEELAELMVG 239 (501)
T ss_pred EEEcCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeccHH-HHHHhhCeeEEEeC-CeEEeeecCCCCCCHHHHHHHhcC
Confidence 9999999999999999999999999999999999999986 78899999999984 77765544 322 23344443322
Q ss_pred cC-CCCCCCCCCCccccchhccC
Q 000997 1068 VE-GVPKIRPGYNPAAWMLEVTS 1089 (1194)
Q Consensus 1068 ~~-g~~~~~~~~npa~~~l~~~~ 1089 (1194)
-. -.+.......|.+++|+|-+
T Consensus 240 ~~v~~~~~~~~~~pg~~vL~V~~ 262 (501)
T COG3845 240 REVVLRVVKPPSTPGEVVLEVED 262 (501)
T ss_pred CccccccccCCCCCCCeEEEEee
Confidence 10 01111244678889988744
No 496
>PRK03695 vitamin B12-transporter ATPase; Provisional
Probab=100.00 E-value=3.8e-33 Score=309.36 Aligned_cols=200 Identities=27% Similarity=0.400 Sum_probs=166.8
Q ss_pred eeecceEeEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCceeeEEEECCccCCCCCC---CceEEEEecCCCCCCCCCH
Q 000997 150 ILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVP---PRTSAYVSQQDWQVAEMTV 226 (1194)
Q Consensus 150 iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~lTV 226 (1194)
+|+|+|+++++|++++|+||||||||||+++|+|.++ . +|+|.++|.++..... ++.++|++|++.+++.+||
T Consensus 11 ~l~~vsl~i~~Gei~~l~G~nGsGKSTLl~~l~Gl~~-~---~G~i~~~g~~i~~~~~~~~~~~i~~v~q~~~~~~~~tv 86 (248)
T PRK03695 11 RLGPLSAEVRAGEILHLVGPNGAGKSTLLARMAGLLP-G---SGSIQFAGQPLEAWSAAELARHRAYLSQQQTPPFAMPV 86 (248)
T ss_pred eecceEEEEcCCCEEEEECCCCCCHHHHHHHHcCCCC-C---CeEEEECCEecCcCCHHHHhhheEEecccCccCCCccH
Confidence 7999999999999999999999999999999999874 2 8999999988754332 3468999999888888999
Q ss_pred HHHHHHhhhccCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhccCcchhHHHHHHHHHhCCcccccccccCccCCC
Q 000997 227 RETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEMLKG 306 (1194)
Q Consensus 227 ~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~k~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~ 306 (1194)
+||+.+..... . .. .+....++++++.+||.+..++.+ +.
T Consensus 87 ~~nl~~~~~~~-~-~~---------------------------------~~~~~~~~~~l~~~~l~~~~~~~~-----~~ 126 (248)
T PRK03695 87 FQYLTLHQPDK-T-RT---------------------------------EAVASALNEVAEALGLDDKLGRSV-----NQ 126 (248)
T ss_pred HHHHHhcCccC-C-Cc---------------------------------HHHHHHHHHHHHHcCCHhHhcCCc-----cc
Confidence 99998753110 0 00 000224678899999987766655 46
Q ss_pred CChhhhhHHHHHHHHhC-------CCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEE
Q 000997 307 ISGGQKKRLTTGELLVG-------PARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVI 379 (1194)
Q Consensus 307 LSGGqkqRvsia~al~~-------~~~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vi 379 (1194)
|||||||||+||+||+. +|++++|||||+|||+.++..+.+.|+++++. +++|+.++|+..++..++|+++
T Consensus 127 LS~G~~qrv~la~al~~~~~~~~p~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~--~~tvi~~sH~~~~~~~~~d~i~ 204 (248)
T PRK03695 127 LSGGEWQRVRLAAVVLQVWPDINPAGQLLLLDEPMNSLDVAQQAALDRLLSELCQQ--GIAVVMSSHDLNHTLRHADRVW 204 (248)
T ss_pred CCHHHHHHHHHHHHHhccccccCCCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhC--CCEEEEEecCHHHHHHhCCEEE
Confidence 99999999999999997 67999999999999999999999999998642 4566668889999999999999
Q ss_pred EEcCCeEEEecChhhH
Q 000997 380 LLSEGQIVYQGPRVSV 395 (1194)
Q Consensus 380 lL~~G~iv~~G~~~~~ 395 (1194)
+|++|++++.|+.+++
T Consensus 205 ~l~~G~i~~~g~~~~~ 220 (248)
T PRK03695 205 LLKQGKLLASGRRDEV 220 (248)
T ss_pred EEECCEEEEECCHHHH
Confidence 9999999999987765
No 497
>COG4987 CydC ABC-type transport system involved in cytochrome bd biosynthesis, fused ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=3e-34 Score=326.89 Aligned_cols=212 Identities=24% Similarity=0.383 Sum_probs=177.3
Q ss_pred eeEeecceeeeecccccccccccccceEEeeeeeEEEeCCcEEEEEccCCCChHHHHhhhcCCCCCCeeEEEEEEcCccC
Q 000997 816 SMAFGNINYFVDVPVELKQEGVLEDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPK 895 (1194)
Q Consensus 816 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 895 (1194)
.++++|+++.++. ...++|+|+|+++++||++||+|+||||||||+.+|+|... +.+|+|.+||.++
T Consensus 336 ~l~~~~vsF~y~~-----------~~~~~L~~~~l~l~~GEkvAIlG~SGsGKSTllqLl~~~~~--~~~G~i~~~g~~~ 402 (573)
T COG4987 336 ALELRNVSFTYPG-----------QQTKALKNFNLTLAQGEKVAILGRSGSGKSTLLQLLAGAWD--PQQGSITLNGVEI 402 (573)
T ss_pred eeeeccceeecCC-----------CccchhhccceeecCCCeEEEECCCCCCHHHHHHHHHhccC--CCCCeeeECCcCh
Confidence 5778888887742 34579999999999999999999999999999999999766 5689999999876
Q ss_pred C---hhcccceeeEeecCCCCCCCCcHHHHHHHHhhhcCCCcCcHHHHHHHHHHHHHHcCCCcccCC-------cccCCC
Q 000997 896 R---QETFARISGYCEQNDIHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGA-------LIGLPG 965 (1194)
Q Consensus 896 ~---~~~~~~~~gyv~Q~~~~~~~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~-------~~~~~~ 965 (1194)
. +...++.+++++|...+|.+ |+|+||.++. | +.+ ++.+.++++.+||.+.... .+|. +
T Consensus 403 ~~l~~~~~~e~i~vl~Qr~hlF~~-Tlr~NL~lA~----~-~As----DEel~~aL~qvgL~~l~~~~p~gl~t~lge-~ 471 (573)
T COG4987 403 ASLDEQALRETISVLTQRVHLFSG-TLRDNLRLAN----P-DAS----DEELWAALQQVGLEKLLESAPDGLNTWLGE-G 471 (573)
T ss_pred hhCChhhHHHHHhhhccchHHHHH-HHHHHHhhcC----C-CCC----HHHHHHHHHHcCHHHHHHhChhhhhchhcc-C
Confidence 3 34467789999998887754 9999998642 2 223 3457888999999876543 3443 3
Q ss_pred CCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCeEEEEccC
Q 000997 966 INGLSTEQRKRLTIAVELVANPSIVFMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRG 1045 (1194)
Q Consensus 966 ~~~LSgGqrqrl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~g 1045 (1194)
+..||||||||++|||+|++|.++++|||||.|||+.+.++|++.+.+-+ +|+|+|++||+.. -.+.||+|++|+ +
T Consensus 472 G~~LSGGE~rRLAlAR~LL~dapl~lLDEPTegLD~~TE~~vL~ll~~~~-~~kTll~vTHrL~--~le~~drIivl~-~ 547 (573)
T COG4987 472 GRRLSGGERRRLALARALLHDAPLWLLDEPTEGLDPITERQVLALLFEHA-EGKTLLMVTHRLR--GLERMDRIIVLD-N 547 (573)
T ss_pred CCcCCchHHHHHHHHHHHHcCCCeEEecCCcccCChhhHHHHHHHHHHHh-cCCeEEEEecccc--cHhhcCEEEEEE-C
Confidence 46899999999999999999999999999999999999999999999866 4999999999975 458899999998 5
Q ss_pred cEEEEeCCCC
Q 000997 1046 GELIYAGPLG 1055 (1194)
Q Consensus 1046 G~~~~~g~~~ 1055 (1194)
|+++..|..+
T Consensus 548 Gkiie~G~~~ 557 (573)
T COG4987 548 GKIIEEGTHA 557 (573)
T ss_pred CeeeecCCHH
Confidence 8999999754
No 498
>PRK14272 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.4e-33 Score=309.05 Aligned_cols=208 Identities=24% Similarity=0.302 Sum_probs=165.5
Q ss_pred eeeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCC--ceeeEEEECCccCCCC-----CCCceEEEEecCCCC
Q 000997 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHL--QVSGKITYNGHGFKEF-----VPPRTSAYVSQQDWQ 220 (1194)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~--~~~G~i~~~G~~~~~~-----~~~~~~~yv~Q~d~~ 220 (1194)
+++|+|+|+.|++|++++|+||||||||||+++|+|.+++.. ..+|+|.++|.++... ..++.++|++|++.+
T Consensus 17 ~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~ 96 (252)
T PRK14272 17 KQAVKNVNLDVQRGTVNALIGPSGCGKTTFLRAINRMHDLTPGARVTGRILLDGQDIYGPRVDPVAMRRRVGMVFQKPNP 96 (252)
T ss_pred EEeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCcCCCCceeEEECCEEcccCccCHHHhhceeEEEeccCcc
Confidence 469999999999999999999999999999999999986531 1479999999887531 124579999999998
Q ss_pred CCCCCHHHHHHHhhhccCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhccCcchhHHHHHHHHHhCCc----cccc
Q 000997 221 VAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLD----TCAD 296 (1194)
Q Consensus 221 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~k~~~~~~~~~~~~~~~~l~~lgL~----~~~d 296 (1194)
++.+|+.||+.++....+... .+ .....++.+++.+++. +..+
T Consensus 97 ~~~~t~~enl~~~~~~~~~~~-~~--------------------------------~~~~~~~~~l~~~~l~~~l~~~~~ 143 (252)
T PRK14272 97 FPTMSVFDNVVAGLKLAGIRD-RD--------------------------------HLMEVAERSLRGAALWDEVKDRLK 143 (252)
T ss_pred CcCCCHHHHHHHHHHhcCCCC-HH--------------------------------HHHHHHHHHHHHcCcchhhhhhhc
Confidence 999999999987543221000 00 0011234455555543 2334
Q ss_pred ccccCccCCCCChhhhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcC
Q 000997 297 TLVGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFD 376 (1194)
Q Consensus 297 t~vg~~~~~~LSGGqkqRvsia~al~~~~~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D 376 (1194)
+. ++.|||||||||+||+||+.+|++|+|||||+|||..+...+.+.|+++++ + ++++.++|+..++.+++|
T Consensus 144 ~~-----~~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~--~-~tiii~sH~~~~~~~~~d 215 (252)
T PRK14272 144 TP-----ATGLSGGQQQRLCIARALAVEPEILLMDEPTSALDPASTARIEDLMTDLKK--V-TTIIIVTHNMHQAARVSD 215 (252)
T ss_pred CC-----cccCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhc--C-CeEEEEeCCHHHHHHhCC
Confidence 43 456999999999999999999999999999999999999999999998853 3 566668888899999999
Q ss_pred eEEEEcCCeEEEecChhhHH
Q 000997 377 DVILLSEGQIVYQGPRVSVL 396 (1194)
Q Consensus 377 ~vilL~~G~iv~~G~~~~~~ 396 (1194)
+|++|++|++++.|+.+++.
T Consensus 216 ~i~~l~~G~i~~~~~~~~~~ 235 (252)
T PRK14272 216 TTSFFLVGDLVEHGPTDQLF 235 (252)
T ss_pred EEEEEECCEEEEeCCHHHHH
Confidence 99999999999999988764
No 499
>PRK14261 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.6e-33 Score=309.52 Aligned_cols=211 Identities=23% Similarity=0.305 Sum_probs=166.3
Q ss_pred eeeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCC--ceeeEEEECCccCCCC-----CCCceEEEEecCCCC
Q 000997 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHL--QVSGKITYNGHGFKEF-----VPPRTSAYVSQQDWQ 220 (1194)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~--~~~G~i~~~G~~~~~~-----~~~~~~~yv~Q~d~~ 220 (1194)
+.+|+|+|+++++|++++|+||||||||||+++|+|.+++.. ..+|+|.++|.++... ..++.++|++|++.+
T Consensus 19 ~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~ 98 (253)
T PRK14261 19 KHALYDITISIPKNRVTALIGPSGCGKSTLLRCFNRMNDLIPGCRITGDILYNGENIMDSGADVVALRRKIGMVFQRPNP 98 (253)
T ss_pred eeeeeeeEEEECCCcEEEEECCCCCCHHHHHHHHhccccCCCCCCcceEEEECCEEccccccchhhhhceEEEEecCCcc
Confidence 359999999999999999999999999999999999875321 2489999999887542 124579999999988
Q ss_pred CCCCCHHHHHHHhhhccCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhccCcchhHHHHHHHHHhCCccccccccc
Q 000997 221 VAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVG 300 (1194)
Q Consensus 221 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~k~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg 300 (1194)
++. ||+||+.|..+..+.... ...+..++.+++.++|.+...+..
T Consensus 99 ~~~-tv~eni~~~~~~~~~~~~---------------------------------~~~~~~~~~~l~~~~l~~~l~~~~- 143 (253)
T PRK14261 99 FPK-SIYENVAYGPRIHGEKNK---------------------------------KTLDTIVEKSLKGAALWDEVKDRL- 143 (253)
T ss_pred Ccc-cHHHHHHhhHHhcCCCCH---------------------------------HHHHHHHHHHHHHhcCchhhHHHh-
Confidence 874 999999986543211000 000123556677777743211111
Q ss_pred CccCCCCChhhhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEE
Q 000997 301 DEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVIL 380 (1194)
Q Consensus 301 ~~~~~~LSGGqkqRvsia~al~~~~~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vil 380 (1194)
+...+.|||||||||+||++|+.+|++++|||||+|||+.++..+.+.|+++++ + .+|+.++|..+++.+.+|++++
T Consensus 144 ~~~~~~LS~G~~qrv~laral~~~p~lllLDEP~~gLD~~~~~~l~~~l~~~~~--~-~tvii~sh~~~~~~~~~d~v~~ 220 (253)
T PRK14261 144 HDSALSLSGGQQQRLCIARTLAVNPEVILMDEPCSALDPIATAKIEDLIEDLKK--E-YTVIIVTHNMQQAARVSDYTGF 220 (253)
T ss_pred hcChhhCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhh--C-ceEEEEEcCHHHHHhhCCEEEE
Confidence 234457999999999999999999999999999999999999999999998864 3 4566688888999999999999
Q ss_pred EcCCeEEEecChhhHH
Q 000997 381 LSEGQIVYQGPRVSVL 396 (1194)
Q Consensus 381 L~~G~iv~~G~~~~~~ 396 (1194)
|++|+++..|+.+++.
T Consensus 221 l~~G~i~~~g~~~~~~ 236 (253)
T PRK14261 221 MYLGKLIEFDKTTQIF 236 (253)
T ss_pred EECCEEEEcCCHHHHH
Confidence 9999999999987763
No 500
>PRK14263 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.9e-33 Score=310.55 Aligned_cols=209 Identities=21% Similarity=0.265 Sum_probs=168.3
Q ss_pred eeeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCC--CceeeEEEECCccCCCC-----CCCceEEEEecCCCC
Q 000997 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHH--LQVSGKITYNGHGFKEF-----VPPRTSAYVSQQDWQ 220 (1194)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~--~~~~G~i~~~G~~~~~~-----~~~~~~~yv~Q~d~~ 220 (1194)
.++|+|+|+.++||++++|+||||||||||+++|+|.++|. .+.+|+|+++|+++... ..++.++|++|++.+
T Consensus 21 ~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~i~~v~q~~~~ 100 (261)
T PRK14263 21 FMAVRDSHVPIRKNEITGFIGPSGCGKSTVLRSLNRMNDLVKGFRFEGHVHFLGQDVYGKGVDPVVVRRYIGMVFQQPNP 100 (261)
T ss_pred EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHcccccccCCCCceEEEECCEeccccccchHhhhhceEEEecCCcc
Confidence 46999999999999999999999999999999999998751 12489999999886432 224679999999887
Q ss_pred CCCCCHHHHHHHhhhccCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhccCcchhHHHHHHHHHhCCccccccccc
Q 000997 221 VAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVG 300 (1194)
Q Consensus 221 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~k~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg 300 (1194)
+ .+|+.||+.++....+.. + .....++.+++.+||.+..+...+
T Consensus 101 ~-~~tv~enl~~~~~~~~~~---------------------~--------------~~~~~~~~~l~~~~l~~~i~~~~~ 144 (261)
T PRK14263 101 F-SMSIFDNVAFGLRLNRYK---------------------G--------------DLGDRVKHALQGAALWDEVKDKLK 144 (261)
T ss_pred c-cccHHHHHHHHHhhcCch---------------------H--------------HHHHHHHHHHHHcCCchhhhhhhh
Confidence 7 599999998864322100 0 001236677888888643322222
Q ss_pred CccCCCCChhhhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEE
Q 000997 301 DEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVIL 380 (1194)
Q Consensus 301 ~~~~~~LSGGqkqRvsia~al~~~~~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vil 380 (1194)
...+.||||||||++|||||+.+|++|+|||||+|||+.+..++.+.|+++.+ + ++++.++|...++.+++|+|++
T Consensus 145 -~~~~~LS~G~~qrv~laral~~~p~llllDEPtsgLD~~~~~~l~~~l~~~~~--~-~tii~isH~~~~i~~~~d~v~~ 220 (261)
T PRK14263 145 -VSGLSLSGGQQQRLCIARAIATEPEVLLLDEPCSALDPIATRRVEELMVELKK--D-YTIALVTHNMQQAIRVADTTAF 220 (261)
T ss_pred -CCcccCCHHHHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhc--C-CeEEEEeCCHHHHHHhCCEEEE
Confidence 34567999999999999999999999999999999999999999999998853 3 5666688889999999999999
Q ss_pred Ec--------CCeEEEecChhhHH
Q 000997 381 LS--------EGQIVYQGPRVSVL 396 (1194)
Q Consensus 381 L~--------~G~iv~~G~~~~~~ 396 (1194)
|+ +|+++..|+.+++.
T Consensus 221 l~~~~~~~~~~G~i~~~g~~~~~~ 244 (261)
T PRK14263 221 FSVDISQGTRTGYLVEMGPTAQIF 244 (261)
T ss_pred EecccccccCCceEEEeCCHHHHH
Confidence 95 89999999988764
Done!