BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 001003
(1192 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9FGR0|CPSF1_ARATH Cleavage and polyadenylation specificity factor subunit 1
OS=Arabidopsis thaliana GN=CPSF160 PE=1 SV=2
Length = 1442
Score = 1759 bits (4556), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 858/1175 (73%), Positives = 994/1175 (84%), Gaps = 39/1175 (3%)
Query: 1 MSFAAYKMMHWPTGIANCGSGFITHSRADYVPQIPLIQT-EELDSELPS-KRGIGPVPNL 58
MSFAAYKMMHWPTG+ NC SG+ITHS +D QIP++ +++++E P+ KRGIGP+PN+
Sbjct: 1 MSFAAYKMMHWPTGVENCASGYITHSLSDSTLQIPIVSVHDDIEAEWPNPKRGIGPLPNV 60
Query: 59 VVTAANVIEIYVVRVQEEG-SKESKNSGETKRRVLMDGISAASLELVCHYRLHGNVESLA 117
V+TAAN++E+Y+VR QEEG ++E +N KR +MDG+ SLELVCHYRLHGNVES+A
Sbjct: 61 VITAANILEVYIVRAQEEGNTQELRNPKLAKRGGVMDGVYGVSLELVCHYRLHGNVESIA 120
Query: 118 ILSQGGADNSRRRDSIILAFEDAKISVLEFDDSIHGLRITSMHCFESPEWLHLKRGRESF 177
+L GG ++S+ RDSIIL F DAKISVLEFDDSIH LR+TSMHCFE P+WLHLKRGRESF
Sbjct: 121 VLPMGGGNSSKGRDSIILTFRDAKISVLEFDDSIHSLRMTSMHCFEGPDWLHLKRGRESF 180
Query: 178 ARGPLVKVDPQGRCGGVLVYGLQMIILKASQGGSGLVGDEDTFGSGGGFSARIESSHVIN 237
RGPLVKVDPQGRCGGVLVYGLQMIILK SQ GSGLVGD+D F SGG SAR+ESS++IN
Sbjct: 181 PRGPLVKVDPQGRCGGVLVYGLQMIILKTSQVGSGLVGDDDAFSSGGTVSARVESSYIIN 240
Query: 238 LRDLDMKHVKDFIFVHGYIEPVMVILHERELTWAGRVSWKHHTCMISALSISTTLKQHPL 297
LRDL+MKHVKDF+F+HGYIEPV+VIL E E TWAGRVSWKHHTC++SALSI++TLKQHP+
Sbjct: 241 LRDLEMKHVKDFVFLHGYIEPVIVILQEEEHTWAGRVSWKHHTCVLSALSINSTLKQHPV 300
Query: 298 IWSAMNLPHDAYKLLAVPSPIGGVLVVGANTIHYHSQSASCALALNNYAVSLDSSQELPR 357
IWSA+NLPHDAYKLLAVPSPIGGVLV+ ANTIHYHSQSASCALALNNYA S DSSQELP
Sbjct: 301 IWSAINLPHDAYKLLAVPSPIGGVLVLCANTIHYHSQSASCALALNNYASSADSSQELPA 360
Query: 358 SSFSVELDAAHATWLQNDVALLSTKTGDLVLLTVVYDGRVVQRLDLSKTNPSVLTSDITT 417
S+FSVELDAAH TW+ NDVALLSTK+G+L+LLT++YDGR VQRLDLSK+ SVL SDIT+
Sbjct: 361 SNFSVELDAAHGTWISNDVALLSTKSGELLLLTLIYDGRAVQRLDLSKSKASVLASDITS 420
Query: 418 IGNSLFFLGSRLGDSLLVQFTCGSGTSMLSSGLKEEFGDIEADAPSTKRLRRSSSDALQD 477
+GNSLFFLGSRLGDSLLVQF+C SG + GL++E DIE + KRLR +SD QD
Sbjct: 421 VGNSLFFLGSRLGDSLLVQFSCRSGPAASLPGLRDEDEDIEGEGHQAKRLRM-TSDTFQD 479
Query: 478 MVNGEELSLYGSASNNTESAQKTFSFAVRDSLVNIGPLKDFSYGLRINADASATGISKQS 537
+ EELSL+GS NN++SAQK+FSFAVRDSLVN+GP+KDF+YGLRINADA+ATG+SKQS
Sbjct: 480 TIGNEELSLFGSTPNNSDSAQKSFSFAVRDSLVNVGPVKDFAYGLRINADANATGVSKQS 539
Query: 538 NYEL--------------------------VELPGCKGIWTVYHKSSRGHNADSSRMAAY 571
NYEL VELPGCKGIWTVYHKSSRGHNADSS+MAA
Sbjct: 540 NYELVCCSGHGKNGALCVLRQSIRPEMITEVELPGCKGIWTVYHKSSRGHNADSSKMAAD 599
Query: 572 DDEYHAYLIISLEARTMVLETADLLTEVTESVDYFVQGRTIAAGNLFGRRRVIQVFERGA 631
+DEYHAYLIISLEARTMVLETADLLTEVTESVDY+VQGRTIAAGNLFGRRRVIQVFE GA
Sbjct: 600 EDEYHAYLIISLEARTMVLETADLLTEVTESVDYYVQGRTIAAGNLFGRRRVIQVFEHGA 659
Query: 632 RILDGSYMTQDLSFGPSNSESGSGSENSTVLSVSIADPYVLLGMSDGSIRLLVGDPSTCT 691
RILDGS+M Q+LSFG SNSES SGSE+STV SVSIADPYVLL M+D SIRLLVGDPSTCT
Sbjct: 660 RILDGSFMNQELSFGASNSESNSGSESSTVSSVSIADPYVLLRMTDDSIRLLVGDPSTCT 719
Query: 692 VSVQTPAAIESSKKPVSSCTLYHDKGPEPWLRKTSTDAWLSTGVGEAIDGADGGPLDQGD 751
VS+ +P+ +E SK+ +S+CTLYHDKGPEPWLRK STDAWLS+GVGEA+D DGGP DQGD
Sbjct: 720 VSISSPSVLEGSKRKISACTLYHDKGPEPWLRKASTDAWLSSGVGEAVDSVDGGPQDQGD 779
Query: 752 IYSVVCYESGALEIFDVPNFNCVFTVDKFVSGRTHIVDTYMREALKDSETEINSSSEEGT 811
IY VVCYESGALEIFDVP+FNCVF+VDKF SGR H+ D + E E E+N +SE+ T
Sbjct: 780 IYCVVCYESGALEIFDVPSFNCVFSVDKFASGRRHLSDMPIHEL----EYELNKNSEDNT 835
Query: 812 GQGRKENIHSMKVVELAMQRWSAHHSRPFLFAILTDGTILCYQAYLFEGPENTSKSDDPV 871
+ I + +VVELAMQRWS HH+RPFLFA+L DGTILCY AYLF+G ++T K+++ +
Sbjct: 836 S---SKEIKNTRVVELAMQRWSGHHTRPFLFAVLADGTILCYHAYLFDGVDST-KAENSL 891
Query: 872 STSRSLSVSNVSASRLRNLRFSRTPLDAYTREETPHGAPCQRITIFKNISGHQGFFLSGS 931
S+ ++++ +S+LRNL+F R PLD TRE T G QRIT+FKNISGHQGFFLSGS
Sbjct: 892 SSENPAALNSSGSSKLRNLKFLRIPLDTSTREGTSDGVASQRITMFKNISGHQGFFLSGS 951
Query: 932 RPCWCMVFRERLRVHPQLCDGSIVAFTVLHNVNCNHGFIYVTSQGILKICQLPSGSTYDN 991
RP WCM+FRERLR H QLCDGSI AFTVLHNVNCNHGFIYVT+QG+LKICQLPS S YDN
Sbjct: 952 RPGWCMLFRERLRFHSQLCDGSIAAFTVLHNVNCNHGFIYVTAQGVLKICQLPSASIYDN 1011
Query: 992 YWPVQKVIPLKATPHQITYFAEKNLYPLIVSVPVLKPLNQVLSLLIDQEVGHQIDNHNLS 1051
YWPVQK IPLKATPHQ+TY+AEKNLYPLIVS PV KPLNQVLS L+DQE G Q+DNHN+S
Sbjct: 1012 YWPVQK-IPLKATPHQVTYYAEKNLYPLIVSYPVSKPLNQVLSSLVDQEAGQQLDNHNMS 1070
Query: 1052 SVDLHRTYTVEEYEVRILEPDRAGGPWQTRATIPMQSSENALTVRVVTLFNTTTKENETL 1111
S DL RTYTVEE+E++ILEP+R+GGPW+T+A IPMQ+SE+ALTVRVVTL N +T ENETL
Sbjct: 1071 SDDLQRTYTVEEFEIQILEPERSGGPWETKAKIPMQTSEHALTVRVVTLLNASTGENETL 1130
Query: 1112 LAIGTAYVQGEDVAARGRVLLFSTGRNADNPQNLV 1146
LA+GTAYVQGEDVAARGRVLLFS G+N DN QN+V
Sbjct: 1131 LAVGTAYVQGEDVAARGRVLLFSFGKNGDNSQNVV 1165
>sp|Q7XWP1|CPSF1_ORYSJ Probable cleavage and polyadenylation specificity factor subunit 1
OS=Oryza sativa subsp. japonica GN=Os04g0252200 PE=3 SV=2
Length = 1441
Score = 1393 bits (3605), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 713/1187 (60%), Positives = 868/1187 (73%), Gaps = 66/1187 (5%)
Query: 1 MSFAAYKMMHWPTGIANCGSGFITHSRADYVPQIPLIQTE-----ELDSELPSKRG--IG 53
MS+AAYKMMHWPTG+ +C +GF+THS +D ++DS + R +G
Sbjct: 1 MSYAAYKMMHWPTGVDHCAAGFVTHSPSDAAAFFTAATVGPGPEGDIDSAAAASRPRRLG 60
Query: 54 PVPNLVVTAANVIEIYVVRVQEE------GSKESKNSGETKRRVLMDGISAASLELVCHY 107
P PNLVV AANV+E+Y VR + G++ S +SG ++DGIS A LELVC+Y
Sbjct: 61 PSPNLVVAAANVLEVYAVRAETAAEDGGGGTQPSSSSG-----AVLDGISGARLELVCYY 115
Query: 108 RLHGNVESLAILSQGGADNSRRRDSIILAFEDAKISVLEFDDSIHGLRITSMHCFESPEW 167
RLHGN+ES+ +LS G A+N RR +I LAF+DAKI+ LEFDD+IHGLR +SMHCFE PEW
Sbjct: 116 RLHGNIESMTVLSDG-AEN--RRATIALAFKDAKITCLEFDDAIHGLRTSSMHCFEGPEW 172
Query: 168 LHLKRGRESFARGPLVKVDPQGRCGGVLVYGLQMIILKASQGGSGLVGDEDTFGSGGGFS 227
HLKRGRESFA GP++K DP GRCG L YGLQMIILKA+Q G LVG+++ + +
Sbjct: 173 QHLKRGRESFAWGPVIKADPLGRCGAALAYGLQMIILKAAQVGHSLVGEDEPTCALSSTA 232
Query: 228 ARIESSHVINLRDLDMKHVKDFIFVHGYIEPVMVILHERELTWAGRVSWKHHTCMISALS 287
IESS++I+LR LDM HVKDF FVHGYIEPV+VILHE+E TWAGR+ KHHTCMISA S
Sbjct: 233 VCIESSYLIDLRALDMNHVKDFAFVHGYIEPVLVILHEQEPTWAGRILSKHHTCMISAFS 292
Query: 288 ISTTLKQHPLIWSAMNLPHDAYKLLAVPSPIGGVLVVGANTIHYHSQSASCALALNNYAV 347
IS TLKQHP+IWSA NLPHDAY+LLAVP PI GVLV+ AN+IHYHSQS SC+L LNN++
Sbjct: 293 ISMTLKQHPVIWSAANLPHDAYQLLAVPPPISGVLVICANSIHYHSQSTSCSLDLNNFSS 352
Query: 348 SLDSSQELPRSSFSVELDAAHATWLQNDVALLSTKTGDLVLLTVVYDGRVVQRLDLSKTN 407
D S E+ +S+F VELDAA ATWL ND+ + STK G+++LLTVVYDGRVVQRLDL K+
Sbjct: 353 HPDGSPEISKSNFQVELDAAKATWLSNDIVMFSTKAGEMLLLTVVYDGRVVQRLDLMKSK 412
Query: 408 PSVLTSDITTIGNSLFFLGSRLGDSLLVQFTCGSGTSMLSSGLKEEFGDIEADAPSTKRL 467
SVL+S +T+IGNS FFLGSRLGDSLLVQF+ + S+L E DIE D P +KRL
Sbjct: 413 ASVLSSAVTSIGNSFFFLGSRLGDSLLVQFSYCASKSVLQDLTNERSADIEGDLPFSKRL 472
Query: 468 RRSSSDALQDMVNGEELSLYG-SASNNTESAQKTFSFAVRDSLVNIGPLKDFSYGLRINA 526
+R SD LQD+ + EELS A N+ ESAQK S+ VRD+L+N+GPLKDFSYGLR NA
Sbjct: 473 KRIPSDVLQDVTSVEELSFQNIIAPNSLESAQK-ISYIVRDALINVGPLKDFSYGLRANA 531
Query: 527 DASATGISKQSNYEL--------------------------VELPGCKGIWTVYHKSSRG 560
D +A G +KQSNYEL VELP C+GIWTVY+KS RG
Sbjct: 532 DPNAMGNAKQSNYELVCCSGHGKNGSLSVLQQSIRPDLITEVELPSCRGIWTVYYKSYRG 591
Query: 561 HNADSSRMAAYDDEYHAYLIISLEARTMVLETADLLTEVTESVDYFVQGRTIAAGNLFGR 620
A+ D+EYHAYLIISLE RTMVLET D L EVTE+VDYFVQ TIAAGNLFGR
Sbjct: 592 QMAE-------DNEYHAYLIISLENRTMVLETGDDLGEVTETVDYFVQASTIAAGNLFGR 644
Query: 621 RRVIQVFERGARILDGSYMTQDLSFGPSNSESGSGSENSTVLSVSIADPYVLLGMSDGSI 680
RRVIQV+ +GAR+LDGS+MTQ+L+F +++ S SE V SIADPYVLL M DGS+
Sbjct: 645 RRVIQVYGKGARVLDGSFMTQELNF-TTHASESSSSEALGVACASIADPYVLLKMVDGSV 703
Query: 681 RLLVGDPSTCTVSVQTPAAIESSKKPVSSCTLYHDKGPEPWLRKTSTDAWLSTGVGEAID 740
+LL+GD TCT+SV P+ SS + +++CTLY D+GPEPWL KT +DAWLSTG+ EAID
Sbjct: 704 QLLIGDYCTCTLSVNAPSIFISSSERIAACTLYRDRGPEPWLTKTRSDAWLSTGIAEAID 763
Query: 741 GADGGPLDQGDIYSVVCYESGALEIFDVPNFNCVFTVDKFVSGRTHIVDTYMREALKDSE 800
G DQ DIY ++CYESG LEIF+VP+F CVF+V+ F+SG +VD + + +DS
Sbjct: 764 GNGTSSHDQSDIYCIICYESGKLEIFEVPSFRCVFSVENFISGEALLVDKFSQLIYEDST 823
Query: 801 TEINSSSEEGTGQGRKENIHSMKVVELAMQRWSAHHSRPFLFAILTDGTILCYQAYLFEG 860
E ++ +KE S+++VELAM RWS SRPFLF +L DGT+LCY A+ +E
Sbjct: 824 KERYDCTKASL---KKEAGDSIRIVELAMHRWSGQFSRPFLFGLLNDGTLLCYHAFSYEA 880
Query: 861 PENTSKSDDPVSTSRSLSVSNVSASRLRNLRFSRTPLDAYTREETPH-GAPCQRITIFKN 919
E+ K P+S S N S SRLRNLRF R +D +RE+ P G P RIT F N
Sbjct: 881 SESNVKR-VPLSPQGSADHHNASDSRLRNLRFHRVSIDITSREDIPTLGRP--RITTFNN 937
Query: 920 ISGHQGFFLSGSRPCWCMVFRERLRVHPQLCDGSIVAFTVLHNVNCNHGFIYVTSQGILK 979
+ G++G FLSG+RP W MV R+RLRVHPQLCDG I AFTVLHNVNC+HGFIYVTSQG LK
Sbjct: 938 VGGYEGLFLSGTRPAWVMVCRQRLRVHPQLCDGPIEAFTVLHNVNCSHGFIYVTSQGFLK 997
Query: 980 ICQLPSGSTYDNYWPVQKVIPLKATPHQITYFAEKNLYPLIVSVPVLKPLNQVLSLLIDQ 1039
ICQLPS YD+YWPVQKV PL TPHQ+TY+AE++LYPLIVSVPV++PLNQVLS + DQ
Sbjct: 998 ICQLPSAYNYDSYWPVQKV-PLHGTPHQVTYYAEQSLYPLIVSVPVVRPLNQVLSSMADQ 1056
Query: 1040 EVGHQIDNHNLSSVDLHRTYTVEEYEVRILEPDRAGGPWQTRATIPMQSSENALTVRVVT 1099
E H +DN S+ LH+TYTV+E+EVRILE ++ GG W+T++TIPMQ ENALTVR+VT
Sbjct: 1057 ESVHHMDNDVTSTDALHKTYTVDEFEVRILELEKPGGHWETKSTIPMQLFENALTVRIVT 1116
Query: 1100 LFNTTTKENETLLAIGTAYVQGEDVAARGRVLLFSTGRNADNPQNLV 1146
L NTTTKENETLLAIGTAYV GEDVAARGRVLLFS + ++N QNLV
Sbjct: 1117 LHNTTTKENETLLAIGTAYVLGEDVAARGRVLLFSFTK-SENSQNLV 1162
>sp|Q9V726|CPSF1_DROME Cleavage and polyadenylation specificity factor subunit 1
OS=Drosophila melanogaster GN=Cpsf160 PE=1 SV=1
Length = 1455
Score = 363 bits (933), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 328/1193 (27%), Positives = 542/1193 (45%), Gaps = 182/1193 (15%)
Query: 57 NLVVTAANVIEIYVVRVQEEGSKESK-NSGETKRRVLMDGISAASLELVCHYRLHGNVES 115
NLVV ANV+++Y + E S+ K N E + M LE + Y L+GNV S
Sbjct: 29 NLVVAGANVLKVYRIAPNVEASQRQKLNPSEMRLAPKM------RLECLATYTLYGNVMS 82
Query: 116 LAILSQGGADNSRRRDSIILAFEDAKISVLEFDDSIHGLRITSMHCFESPEWLHLKRGRE 175
L +S GA RD+++++F+DAK+SVL+ D L+ S+H FE + ++ G
Sbjct: 83 LQCVSLAGA----MRDALLISFKDAKLSVLQHDPDTFALKTLSLHYFEEDD---IRGGWT 135
Query: 176 SFARGPLVKVDPQGRCGGVLVYGLQMIILKASQGGS----GLVGDEDTFGSGGGFSAR-- 229
P V+VDP RC +LVYG ++++L + S L + + +R
Sbjct: 136 GRYFVPTVRVDPDSRCAVMLVYGKRLVVLPFRKDNSLDEIELADVKPIKKAPTAMVSRTP 195
Query: 230 IESSHVINLRDLDMK--HVKDFIFVHGYIEPVMVILHERELTWAGRVSWKHHTCMISALS 287
I +S++I LRDLD K +V D F+HGY EP ++IL+E T GR+ + TC++ A+S
Sbjct: 196 IMASYLIALRDLDEKIDNVLDIQFLHGYYEPTLLILYEPVRTCPGRIKVRSDTCVLVAIS 255
Query: 288 ISTTLKQHPLIWSAMNLPHDAYKLLAVPSPIGGVLVVGANTIHYHSQSASCALALNNYAV 347
++ + HP+IW+ +LP D ++ + PIGG LV+ N + Y +QS Y V
Sbjct: 256 LNIQQRVHPIIWTVNSLPFDCLQVYPIQKPIGGCLVMTVNAVIYLNQSVP------PYGV 309
Query: 348 SLDSSQE-------LPRSSFSVELDAAHATWLQNDVALLSTKTGDLVLLTVVYDG-RVVQ 399
SL+SS + P+ + LD A+ ++ D ++S +TGDL +LT+ D R V+
Sbjct: 310 SLNSSADNSTAFPLKPQDGVRISLDCANFAFIDVDKLVISLRTGDLYVLTLCVDSMRTVR 369
Query: 400 RLDLSKTNPSVLTSDITTIGNSLFFLGSRLGDSLLVQFTCGSGTSMLS------------ 447
K SVLTS I + + FLGSRLG+SLL+ FT +++++
Sbjct: 370 NFHFHKAAASVLTSCICVLHSEYIFLGSRLGNSLLLHFTEEDQSTVITLDEVEQQSEQQQ 429
Query: 448 SGLKEEFGDIEADAPSTKRLRRSSSDALQDMVNGEELSLYGSASNNTESAQKTFSFAVRD 507
L++E ++E + +L + + A + EEL +YGS + + + F F V D
Sbjct: 430 RNLQDEDQNLE-EIFDVDQLEMAPTQAKSRRIEDEELEVYGSGAKASVLQLRKFIFEVCD 488
Query: 508 SLVNIGPLKDFSYGLRINAD--------------------ASATGISKQS---------N 538
SL+N+ P+ G R+ + +ATG SK N
Sbjct: 489 SLMNVAPINYMCAGERVEFEEDGVTLRPHAESLQDLKIELVAATGHSKNGALSVFVNCIN 548
Query: 539 YELV---ELPGCKGIWTVYHKSSRGHNADSSRMAAYDDEYHAYLIISLEARTMVLETADL 595
+++ EL GC +WTV+ D+++ ++ +D+ H ++++S T+VL+T
Sbjct: 549 PQIITSFELDGCLDVWTVFD--------DATKKSSRNDQ-HDFMLLSQRNSTLVLQTGQE 599
Query: 596 LTEVTESVDYFVQGRTIAAGNLFGRRRVIQVFERGARILDGSYMTQDLSFGPSNSESGSG 655
+ E+ E+ + V TI GNL +R ++QV R R+L G+ + Q++
Sbjct: 600 INEI-ENTGFTVNQPTIFVGNLGQQRFIVQVTTRHVRLLQGTRLIQNVPI---------- 648
Query: 656 SENSTVLSVSIADPYVLLGMSDGSIRLLVGDPSTCTVSVQTPAAIESSKKPVSSCTLYHD 715
S V+ VSIADPYV L + +G + L + T + SS V + + Y D
Sbjct: 649 DVGSPVVQVSIADPYVCLRVLNGQVITLALRETRGTPRLAINKHTISSSPAVVAISAYKD 708
Query: 716 -------KG----------------------PEPWLRKTSTDAWLSTGVGEAI------D 740
KG EP ++ + L G A D
Sbjct: 709 LSGLFTVKGDDINLTGSSNSAFGHSFGGYMKAEPNMKVEDEEDLLYGDAGSAFKMNSMAD 768
Query: 741 GADGGPLDQGDIYS------------VVCYESGALEIFDVPNFNCVFTVDKFVSGRTHIV 788
A D + VV +SG LEI+ +P+ V+ V+ +G +
Sbjct: 769 LAKQSKQKNSDWWRRLLVQAKPSYWLVVARQSGTLEIYSMPDMKLVYLVNDVGNGSMVLT 828
Query: 789 DTYMREALKDSETEINSSSEEGTGQGRKENIHSMKVVELAMQRWSAHHSRPFLFAILTDG 848
D E + S T +S ++ +S +EL++ + RP L + T
Sbjct: 829 DAM--EFVPISLTTQENSKAGIVQACMPQHANSPLPLELSVIGLGLNGERPLLL-VRTRV 885
Query: 849 TILCYQAYLFEGPENTSKSDDPVSTSRSLSVSNVSASRLRNLRFSRTPLDAYTREETPHG 908
+L YQ +F P+ K R + N+ + ++ D E+
Sbjct: 886 ELLIYQ--VFRYPKGHLK-----IRFRKMDQLNLLDQQPTHIDLDEN--DEQEEIESYQM 936
Query: 909 AP--CQRITIFKNISGHQGFFLSGSRPCWC-MVFRERLRVHPQLCDGSIVAFTVLHNVNC 965
P Q++ F N+ G G + G PC+ + FR LR+H L +G + +F +NVN
Sbjct: 937 QPKYVQKLRPFANVGGLSGVMVCGVNPCFVFLTFRGELRIHRLLGNGDVRSFAAFNNVNI 996
Query: 966 NHGFIYVTSQGILKICQLPSGSTYDNYWPVQKVIPLKATPHQITYFAEKNLYPLIVSVPV 1025
+GF+Y + LKI LPS +YD+ WPV+KV PL+ TP Q+ Y E +Y LI
Sbjct: 997 PNGFLYFDTTYELKISVLPSYLSYDSVWPVRKV-PLRCTPRQLVYHRENRVYCLITQTE- 1054
Query: 1026 LKPLNQVLSLL-IDQEVGHQIDNHNLSSVDLHRTYTV-EEYEVRILEPDRAGGPWQT--R 1081
+P+ + D+E+ + Y + ++E+ ++ P+ W+
Sbjct: 1055 -EPMTKYYRFNGEDKELSEESRGERF-------IYPIGSQFEMVLISPET----WEIVPD 1102
Query: 1082 ATIPMQSSENALTVRVVTL-FNTTTKENETLLAIGTAYVQGEDVAARGRVLLF 1133
A+I + E+ ++V L + T + L IGT + ED+ +RG + ++
Sbjct: 1103 ASITFEPWEHVTAFKIVKLSYEGTRSGLKEYLCIGTNFNYSEDITSRGNIHIY 1155
>sp|Q9EPU4|CPSF1_MOUSE Cleavage and polyadenylation specificity factor subunit 1 OS=Mus
musculus GN=Cpsf1 PE=1 SV=1
Length = 1441
Score = 307 bits (786), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 219/673 (32%), Positives = 344/673 (51%), Gaps = 79/673 (11%)
Query: 57 NLVVTAANVIEIYVVRVQEEGSKESKNSGETKRRVLMDGISAASLELVCHYRLHGNVESL 116
NLVV A ++YV R+ + +KN G T+ + + LELV + GNV S+
Sbjct: 29 NLVV--AGTSQLYVYRLNRDAEALTKNDGSTEGKAHRE-----KLELVASFSFFGNVMSM 81
Query: 117 AILSQGGADNSRRRDSIILAFEDAKISVLEFDDSIHGLRITSMHCFESPEWLHLKRGRES 176
A + GA +RD+++L+F+DAK+SV+E+D H L+ S+H FE PE L+ G
Sbjct: 82 ASVQLAGA----KRDALLLSFKDAKLSVVEYDPGTHDLKTLSLHYFEEPE---LRDGFVQ 134
Query: 177 FARGPLVKVDPQGRCGGVLVYGLQMIILKASQGGSGLVGDEDTFGSGGGFSARIESSHVI 236
P V+VDP GRC +L+YG ++++L + + +E G G + S++I
Sbjct: 135 NVHTPRVRVDPDGRCAAMLIYGTRLVVLPFRRES---LAEEHEGLMGEGQRSSFLPSYII 191
Query: 237 NLRDLDMK--HVKDFIFVHGYIEPVMVILHERELTWAGRVSWKHHTCMISALSISTTLKQ 294
++R LD K ++ D F+HGY EP ++IL E TW GRV+ + TC I A+S++ T K
Sbjct: 192 DVRALDEKLLNIIDLQFLHGYYEPTLLILFEPNQTWPGRVAVRQDTCSIVAISLNITQKV 251
Query: 295 HPLIWSAMNLPHDAYKLLAVPSPIGGVLVVGANTIHYHSQSA-SCALALNNYAVSLDSSQ 353
HP+IWS +LP D + LAVP PIGGV++ N++ Y +QS +ALN+ +
Sbjct: 252 HPVIWSLTSLPFDCTQALAVPKPIGGVVIFAVNSLLYLNQSVPPYGVALNSLTTGTTAFP 311
Query: 354 ELPRSSFSVELDAAHATWLQNDVALLSTKTGDLVLLTVVYDG-RVVQRLDLSKTNPSVLT 412
+ + LD A A ++ D ++S K G++ +LT++ DG R V+ K SVLT
Sbjct: 312 LRTQEGVRITLDCAQAAFISYDKMVISLKGGEIYVLTLITDGMRSVRAFHFDKAAASVLT 371
Query: 413 SDITTIGNSLFFLGSRLGDSLLVQFTCGSGTSMLSSGLKEEFGDIEADAPSTKRLRRS-- 470
+ + T+ FLGSRLG+SLL+++T SS E D E KR+ +
Sbjct: 372 TSMVTMEPGYLFLGSRLGNSLLLKYTEKLQEPPASS--VREAADKEEPPSKKKRVEPAVG 429
Query: 471 ---SSDALQDMVNGEELSLYGS-ASNNTESAQKTFSFAVRDSLVNIGPLKDFSYG----- 521
QD V+ E+ +YGS A + T+ A T+SF V DS++NIGP + + G
Sbjct: 430 WTGGKTVPQDEVD--EIEVYGSEAQSGTQLA--TYSFEVCDSMLNIGPCANAAVGEPAFL 485
Query: 522 -----------LRI------NADASATGISKQSNYELV---ELPGCKGIWTVYH------ 555
L I + + + + K ++V ELPGC +WTV
Sbjct: 486 SEEFQNSPEPDLEIVVCSGYGKNGALSVLQKSIRPQVVTTFELPGCYDMWTVIAPVRKEE 545
Query: 556 ----KSSRGHNADSSRMAAYDDEYHAYLIISLEARTMVLETADLLTEVTESVDYFVQGRT 611
K+ S+ A D H +LI+S E TM+L+T + E+ S + QG T
Sbjct: 546 EETPKAESTEQEPSAPKAEEDGRRHGFLILSREDSTMILQTGQEIMELDTS-GFATQGPT 604
Query: 612 IAAGNLFGRRRVIQVFERGARILDGSYMTQDLSFGPSNSESGSGSENSTVLSVSIADPYV 671
+ AGN+ R ++QV G R+L+G L F P + + ++ ++ADPYV
Sbjct: 605 VFAGNIGDNRYIVQVSPLGIRLLEG---VNQLHFIPVDL-------GAPIVQCAVADPYV 654
Query: 672 LLGMSDGSIRLLV 684
++ ++G + + +
Sbjct: 655 VIMSAEGHVTMFL 667
Score = 140 bits (354), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 107/411 (26%), Positives = 181/411 (44%), Gaps = 30/411 (7%)
Query: 753 YSVVCYESGALEIFDVPNFNCVFTVDKFVSGRTHIVDTYMREALKDSETEINSSSEEGTG 812
+ ++ E+G +EI+ +P++ VF V F G+ +VD+ + E EE T
Sbjct: 782 WCLLVRENGTMEIYQLPDWRLVFLVKNFPVGQRVLVDSSFGQPTTQGEVR----KEEATR 837
Query: 813 QGRKENIHSMKVVELAMQRWSAHHSRPFLFAILTDGTILCYQAYLFEGPENTSKSDDPVS 872
QG + + +V L + SRP+L + D +L Y+A+ P ++ +
Sbjct: 838 QGELPLVKEVLLVALG-----SRQSRPYLL-VHVDQELLIYEAF----PHDSQLGQGNLK 887
Query: 873 TSRSLSVSNVSASRLRNLRFSRTPLDAYTREETPHGAPCQRITIFKNISGHQGFFLSGSR 932
N++ + + T E + R F++I G+ G F+ G
Sbjct: 888 VRFKKVPHNINFREKKPKPSKKKAEGCSTEEGSGGRGRVARFRYFEDIYGYSGVFICGPS 947
Query: 933 PCWCMVF-RERLRVHPQLCDGSIVAFTVLHNVNCNHGFIYVTSQGILKICQLPSGSTYDN 991
P W +V R LR+HP DG I +F HNVNC GF+Y QG L+I LP+ +YD
Sbjct: 948 PHWLLVTGRGALRLHPMGIDGPIDSFAPFHNVNCPRGFLYFNRQGELRISVLPAYLSYDA 1007
Query: 992 YWPVQKVIPLKATPHQITYFAEKNLYPLIVSVPVLKPLNQVLSLLIDQEVGHQIDNHNLS 1051
WPV+K IPL+ T H + Y E +Y + S P + I + G + + +
Sbjct: 1008 PWPVRK-IPLRCTAHYVAYHVESKVYAVATSTNT--PCTR-----IPRMTGEEKEFEAIE 1059
Query: 1052 SVDLHRTYTVEEYEVRILEPDRAGGPWQT--RATIPMQSSENALTVRVVTLFNTTTKEN- 1108
D + E + ++++ P W+ A I ++ E+ ++ V+L + T
Sbjct: 1060 RDDRYIHPQQEAFSIQLISPVS----WEAIPNARIELEEWEHVTCMKTVSLRSEETVSGL 1115
Query: 1109 ETLLAIGTAYVQGEDVAARGRVLLFSTGRNADNPQNLVLSGSYGPLFSSVQ 1159
+ +A GT +QGE+V RGR+L+ P + + L+ Q
Sbjct: 1116 KGYVAAGTCLMQGEEVTCRGRILIMDVIEVVPEPGQPLTKNKFKVLYEKEQ 1166
>sp|Q10570|CPSF1_HUMAN Cleavage and polyadenylation specificity factor subunit 1 OS=Homo
sapiens GN=CPSF1 PE=1 SV=2
Length = 1443
Score = 304 bits (779), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 219/678 (32%), Positives = 348/678 (51%), Gaps = 87/678 (12%)
Query: 57 NLVVTAANVIEIYVVRVQEEGSKESKNSGETKRRVLMDGISAASLELVCHYRLHGNVESL 116
NLVV A ++YV R+ + +KN T+ + + LEL + GNV S+
Sbjct: 29 NLVV--AGTSQLYVYRLNRDAEALTKNDRSTEGKAHRE-----KLELAASFSFFGNVMSM 81
Query: 117 AILSQGGADNSRRRDSIILAFEDAKISVLEFDDSIHGLRITSMHCFESPEWLHLKRGRES 176
A + GA +RD+++L+F+DAK+SV+E+D H L+ S+H FE PE L+ G
Sbjct: 82 ASVQLAGA----KRDALLLSFKDAKLSVVEYDPGTHDLKTLSLHYFEEPE---LRDGFVQ 134
Query: 177 FARGPLVKVDPQGRCGGVLVYGLQMIIL-----KASQGGSGLVGDEDTFGSGGGFSARIE 231
P V+VDP GRC +LVYG ++++L ++ GLVG+ G +
Sbjct: 135 NVHTPRVRVDPDGRCAAMLVYGTRLVVLPFRRESLAEEHEGLVGE--------GQRSSFL 186
Query: 232 SSHVINLRDLDMK--HVKDFIFVHGYIEPVMVILHERELTWAGRVSWKHHTCMISALSIS 289
S++I++R LD K ++ D F+HGY EP ++IL E TW GRV+ + TC I A+S++
Sbjct: 187 PSYIIDVRALDEKLLNIIDLQFLHGYYEPTLLILFEPNQTWPGRVAVRQDTCSIVAISLN 246
Query: 290 TTLKQHPLIWSAMNLPHDAYKLLAVPSPIGGVLVVGANTIHYHSQSA-SCALALNNYAVS 348
T K HP+IWS +LP D + LAVP PIGGV+V N++ Y +QS +ALN+
Sbjct: 247 ITQKVHPVIWSLTSLPFDCTQALAVPKPIGGVVVFAVNSLLYLNQSVPPYGVALNSLTTG 306
Query: 349 LDSSQELPRSSFSVELDAAHATWLQNDVALLSTKTGDLVLLTVVYDG-RVVQRLDLSKTN 407
+ + + LD A AT++ D ++S K G++ +LT++ DG R V+ K
Sbjct: 307 TTAFPLRTQEGVRITLDCAQATFISYDKMVISLKGGEIYVLTLITDGMRSVRAFHFDKAA 366
Query: 408 PSVLTSDITTIGNSLFFLGSRLGDSLLVQFTCG----SGTSMLSSGLKEEFGDIEADAPS 463
SVLT+ + T+ FLGSRLG+SLL+++T +++ + KEE + +
Sbjct: 367 ASVLTTSMVTMEPGYLFLGSRLGNSLLLKYTEKLQEPPASAVREAADKEEPPSKKKRVDA 426
Query: 464 TKRLRRSSSDALQDMVNGEELSLYGS-ASNNTESAQKTFSFAVRDSLVNIGPLKDFSYG- 521
T + QD V+ E+ +YGS A + T+ A T+SF V DS++NIGP + + G
Sbjct: 427 TAGWSAAGKSVPQDEVD--EIEVYGSEAQSGTQLA--TYSFEVCDSILNIGPCANAAVGE 482
Query: 522 ---------------LRI------NADASATGISKQSNYELV---ELPGCKGIWTVY--- 554
L I + + + + K ++V ELPGC +WTV
Sbjct: 483 PAFLSEEFQNSPEPDLEIVVCSGHGKNGALSVLQKSIRPQVVTTFELPGCYDMWTVIAPV 542
Query: 555 ------HKSSRGHNADSSRMAAYDDE--YHAYLIISLEARTMVLETADLLTEVTESVDYF 606
+ G + S DD+ H +LI+S E TM+L+T + E+ S +
Sbjct: 543 RKEEEDNPKGEGTEQEPSTTPEADDDGRRHGFLILSREDSTMILQTGQEIMELDTS-GFA 601
Query: 607 VQGRTIAAGNLFGRRRVIQVFERGARILDGSYMTQDLSFGPSNSESGSGSENSTVLSVSI 666
QG T+ AGN+ R ++QV G R+L+G L F P + + ++ ++
Sbjct: 602 TQGPTVFAGNIGDNRYIVQVSPLGIRLLEG---VNQLHFIPVDL-------GAPIVQCAV 651
Query: 667 ADPYVLLGMSDGSIRLLV 684
ADPYV++ ++G + + +
Sbjct: 652 ADPYVVIMSAEGHVTMFL 669
Score = 139 bits (349), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 105/413 (25%), Positives = 181/413 (43%), Gaps = 34/413 (8%)
Query: 753 YSVVCYESGALEIFDVPNFNCVFTVDKFVSGRTHIVDTYMREALKDSETEINSSSEEGTG 812
+ ++ E+G +EI+ +P++ VF V F G+ +VD+ + T+ + EE T
Sbjct: 784 WCLLVRENGTMEIYQLPDWRLVFLVKNFPVGQRVLVDS----SFGQPTTQGEARREEATR 839
Query: 813 QGRKENIHSMKVVELAMQRWSAHHSRPFLFAILTDGTILCYQAYLFEGPENTSKSDDPVS 872
QG + + +V L + SRP+L + D +L Y+A+ P ++ +
Sbjct: 840 QGELPLVKEVLLVALG-----SRQSRPYLL-VHVDQELLIYEAF----PHDSQLGQGNLK 889
Query: 873 TSRSLSVSNVSASRLRNLRFSRTPLDAYTREETPHGAPCQRITIFKNISGHQGFFLSGSR 932
N++ + + E R F++I G+ G F+ G
Sbjct: 890 VRFKKVPHNINFREKKPKPSKKKAEGGGAEEGAGARGRVARFRYFEDIYGYSGVFICGPS 949
Query: 933 PCWCMVF-RERLRVHPQLCDGSIVAFTVLHNVNCNHGFIYVTSQGILKICQLPSGSTYDN 991
P W +V R LR+HP DG + +F HNVNC GF+Y QG L+I LP+ +YD
Sbjct: 950 PHWLLVTGRGALRLHPMAIDGPVDSFAPFHNVNCPRGFLYFNRQGELRISVLPAYLSYDA 1009
Query: 992 YWPVQKVIPLKATPHQITYFAEKNLYPLIVS--VPVLKPLNQVLSLLIDQEVGHQIDNHN 1049
WPV+K IPL+ T H + Y E +Y + S P + I + G + +
Sbjct: 1010 PWPVRK-IPLRCTAHYVAYHVESKVYAVATSTNTPCAR---------IPRMTGEEKEFET 1059
Query: 1050 LSSVDLHRTYTVEEYEVRILEPDRAGGPWQT--RATIPMQSSENALTVRVVTLFNTTTKE 1107
+ + + E + ++++ P W+ A I +Q E+ ++ V+L + T
Sbjct: 1060 IERDERYIHPQQEAFSIQLISPVS----WEAIPNARIELQEWEHVTCMKTVSLRSEETVS 1115
Query: 1108 N-ETLLAIGTAYVQGEDVAARGRVLLFSTGRNADNPQNLVLSGSYGPLFSSVQ 1159
+ +A GT +QGE+V RGR+L+ P + + L+ Q
Sbjct: 1116 GLKGYVAAGTCLMQGEEVTCRGRILIMDVIEVVPEPGQPLTKNKFKVLYEKEQ 1168
>sp|Q10569|CPSF1_BOVIN Cleavage and polyadenylation specificity factor subunit 1 OS=Bos
taurus GN=CPSF1 PE=1 SV=1
Length = 1444
Score = 304 bits (778), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 221/678 (32%), Positives = 345/678 (50%), Gaps = 86/678 (12%)
Query: 57 NLVVTAANVIEIYVVRVQEEGSKESKNSGETKRRVLMDGISAASLELVCHYRLHGNVESL 116
NLVV A ++YV R+ + +KN T + + LELV + GNV S+
Sbjct: 29 NLVV--AGTSQLYVYRLNRDSEAPTKNDRSTDGKAHRE--HREKLELVASFSFFGNVMSM 84
Query: 117 AILSQGGADNSRRRDSIILAFEDAKISVLEFDDSIHGLRITSMHCFESPEWLHLKRGRES 176
A + GA +RD+++L+F+DAK+SV+E+D H L+ S+H FE PE L+ G
Sbjct: 85 ASVQLAGA----KRDALLLSFKDAKLSVVEYDPGTHDLKTLSLHYFEEPE---LRDGFVQ 137
Query: 177 FARGPLVKVDPQGRCGGVLVYGLQMIIL-----KASQGGSGLVGDEDTFGSGGGFSARIE 231
P V+VDP GRC +L+YG ++++L ++ GLVG+ G +
Sbjct: 138 NVHTPRVRVDPDGRCAAMLIYGTRLVVLPFRRESLAEEHEGLVGE--------GQRSSFL 189
Query: 232 SSHVINLRDLDMK--HVKDFIFVHGYIEPVMVILHERELTWAGRVSWKHHTCMISALSIS 289
S++I++R LD K ++ D F+HGY EP ++IL E TW GRV+ + TC I A+S++
Sbjct: 190 PSYIIDVRALDEKLLNIVDLQFLHGYYEPTLLILFEPNQTWPGRVAVRQDTCSIVAISLN 249
Query: 290 TTLKQHPLIWSAMNLPHDAYKLLAVPSPIGGVLVVGANTIHYHSQSA-SCALALNNYAVS 348
T K HP+IWS +LP D + LAVP PIGGV++ N++ Y +QS +ALN+
Sbjct: 250 ITQKVHPVIWSLTSLPFDCTQALAVPKPIGGVVIFAVNSLLYLNQSVPPYGVALNSLTTG 309
Query: 349 LDSSQELPRSSFSVELDAAHATWLQNDVALLSTKTGDLVLLTVVYDG-RVVQRLDLSKTN 407
+ + + LD A A ++ D ++S K G++ +LT++ DG R V+ K
Sbjct: 310 TTAFPLRTQEGVRITLDCAQAAFISYDKMVISLKGGEIYVLTLITDGMRSVRAFHFDKAA 369
Query: 408 PSVLTSDITTIGNSLFFLGSRLGDSLLVQFTCGSGTSMLSSGLKEEFGDIEADAPSTKRL 467
SVLT+ + T+ FLGSRLG+SLL+++T S+ E D E KR+
Sbjct: 370 ASVLTTSMVTMEPGYLFLGSRLGNSLLLKYTEKLQEPPASTA--REAADKEEPPSKKKRV 427
Query: 468 RRS-----SSDALQDMVNGEELSLYGS-ASNNTESAQKTFSFAVRDSLVNIGPLKDFSYG 521
+ S QD V+ E+ +YGS A + T+ A T+SF V DS++NIGP + + G
Sbjct: 428 DATTGWSGSKSVPQDEVD--EIEVYGSEAQSGTQLA--TYSFEVCDSILNIGPCANAAMG 483
Query: 522 ----------------LRI------NADASATGISKQSNYELV---ELPGCKGIWTVYHK 556
L I + + + + K ++V ELPGC +WTV
Sbjct: 484 EPAFLSEEFQNSPEPDLEIVVCSGYGKNGALSVLQKSIRPQVVTTFELPGCYDMWTVIAP 543
Query: 557 SSR---------GHNADSSRMAAYDD-EYHAYLIISLEARTMVLETADLLTEVTESVDYF 606
+ G + A DD H +LI+S E TM+L+T + E+ S +
Sbjct: 544 VRKEQEETLKGEGTEPEPGAPEAEDDGRRHGFLILSREDSTMILQTGQEIMELDAS-GFA 602
Query: 607 VQGRTIAAGNLFGRRRVIQVFERGARILDGSYMTQDLSFGPSNSESGSGSENSTVLSVSI 666
QG T+ AGN+ R ++QV G R+L+G L F P + S ++ ++
Sbjct: 603 TQGPTVFAGNIGDNRYIVQVSPLGIRLLEG---VNQLHFIPVDL-------GSPIVQCAV 652
Query: 667 ADPYVLLGMSDGSIRLLV 684
ADPYV++ ++G + + +
Sbjct: 653 ADPYVVIMSAEGHVTMFL 670
Score = 141 bits (355), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 106/411 (25%), Positives = 183/411 (44%), Gaps = 30/411 (7%)
Query: 753 YSVVCYESGALEIFDVPNFNCVFTVDKFVSGRTHIVDTYMREALKDSETEINSSSEEGTG 812
+ ++ E+GA+EI+ +P++ VF V F G+ +VD+ + T+ + EE T
Sbjct: 785 WCLLVRENGAMEIYQLPDWRLVFLVKNFPVGQRVLVDS----SFGQPTTQGEARKEEATR 840
Query: 813 QGRKENIHSMKVVELAMQRWSAHHSRPFLFAILTDGTILCYQAYLFEGPENTSKSDDPVS 872
QG + + +V L + RP+L + D +L Y+A+ P ++ +
Sbjct: 841 QGELPLVKEVLLVALG-----SRQRRPYLL-VHVDQELLIYEAF----PHDSQLGQGNLK 890
Query: 873 TSRSLSVSNVSASRLRNLRFSRTPLDAYTREETPHGAPCQRITIFKNISGHQGFFLSGSR 932
N++ + + T E T R F++I G+ G F+ G
Sbjct: 891 VRFKKVPHNINFREKKPKPSKKKAEGGSTEEGTGPRGRVARFRYFEDIYGYSGVFICGPS 950
Query: 933 PCWCMVF-RERLRVHPQLCDGSIVAFTVLHNVNCNHGFIYVTSQGILKICQLPSGSTYDN 991
P W +V R LR+HP DG I +F HN+NC GF+Y QG L+I LP+ +YD
Sbjct: 951 PHWLLVTGRGALRLHPMGIDGPIDSFAPFHNINCPRGFLYFNRQGELRISVLPAYLSYDA 1010
Query: 992 YWPVQKVIPLKATPHQITYFAEKNLYPLIVSVPVLKPLNQVLSLLIDQEVGHQIDNHNLS 1051
WPV+K IPL+ T H + Y E +Y + S P +V + G + + +
Sbjct: 1011 PWPVRK-IPLRCTAHYVAYHVESKVYAVATSTST--PCTRVPRM-----TGEEKEFETIE 1062
Query: 1052 SVDLHRTYTVEEYEVRILEPDRAGGPWQT--RATIPMQSSENALTVRVVTLFNTTTKEN- 1108
+ + E + ++++ P W+ A I ++ E+ ++ V+L + T
Sbjct: 1063 RDERYVHPQQEAFCIQLISPVS----WEAIPNARIELEEWEHVTCMKTVSLRSEETVSGL 1118
Query: 1109 ETLLAIGTAYVQGEDVAARGRVLLFSTGRNADNPQNLVLSGSYGPLFSSVQ 1159
+ +A GT +QGE+V RGR+L+ P + + L+ Q
Sbjct: 1119 KGYVAAGTCLMQGEEVTCRGRILIMDVIEVVPEPGQPLTKNKFKVLYEKEQ 1169
>sp|Q7SEY2|CFT1_NEUCR Protein cft-1 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A /
CBS 708.71 / DSM 1257 / FGSC 987) GN=cft-1 PE=3 SV=2
Length = 1456
Score = 201 bits (510), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 256/1117 (22%), Positives = 450/1117 (40%), Gaps = 160/1117 (14%)
Query: 94 DGISAASLELVCHYRLHGNVESLAILSQGGADNSRRRDSIILAFEDAKISVLEFDDSIHG 153
D ++A L LV L G + LA + + +S D ++L+F DA++S++E++ +
Sbjct: 96 DRANSAKLVLVAEVTLPGTMTGLARIKKPSGSSSGGADCLLLSFRDARLSLVEWNVERNT 155
Query: 154 LRITSMHCFESPEWLHLKRGRESFARGPLVKVDPQGRCGGVLVYGLQMIILKASQGGSGL 213
L S+H +E E + L+ DP RC + + IL Q +
Sbjct: 156 LETVSIHYYEKEELVGSPWVAPLHQYPTLLVADPASRCAALKFSERNLAILPFKQPDEDM 215
Query: 214 VGD------------EDTFGSGGGFSARIES-----SHVINLRDLD--MKHVKDFIFVHG 254
D +D G+ ++ IE S V+ L L+ + H F+H
Sbjct: 216 DMDNWDEELDGPRPKKDLSGAVANGASTIEDTPYSPSFVLRLSKLEASLLHPVHLAFLHE 275
Query: 255 YIEPVMVILHERELTWAGRVSWKHHTCMISALSISTTLKQHPLIWSAMNLPHDAYKLLAV 314
Y +P + +L + H T M+ L + + I + LP D ++++A+
Sbjct: 276 YRDPTIGVLSSTKTASNSLGHKDHFTYMVFTLDLQQ--RASTTILAVNGLPQDLFRVVAL 333
Query: 315 PSPIGGVLVVGANT-IHYHSQSASCALALNNYAVSLDSSQELPRSSFSVELDAAHATWLQ 373
P+P+GG L+VGAN IH S +A+N S + ++ + L+ L
Sbjct: 334 PAPVGGALLVGANELIHIDQSGKSNGIAVNPLTKQTTSFSLVDQADLDLRLEGCAIDVLA 393
Query: 374 NDVA--LLSTKTGDLVLLTVVYDGRVVQRLDLSKTNP----SVLTSDITTI---GNSLFF 424
++ LL G L L+T DGR V L + P SV+ S +T++ G S F
Sbjct: 394 AELGEFLLILNDGRLGLITFRIDGRTVSGLSIKMIAPEAGGSVIQSRVTSLSRMGRSTMF 453
Query: 425 LGSRLGDSLLVQFTCGSGTSMLSSGLKEEFGDIEADAPSTKRLRRSSSDALQDMVNGEEL 484
+GS GDS+L+ +T G + ++ ++ D D + GEE
Sbjct: 454 VGSEEGDSVLLGWTRRQGQT------QKRKSRLQDADLDLDLDDEDLEDDDDDDLYGEES 507
Query: 485 SLYGSASNNTESAQK-TFSFAVRDSLVNIGPLKDFSYGLRINADAS-------------- 529
+ A + ++ + +F + D L++I P++ +YG + S
Sbjct: 508 ASPEQAMSAAKAIKSGDLNFRIHDRLLSIAPIQKMTYGQPVTLPDSEEERNSEGVRSDLQ 567
Query: 530 ---ATGISKQSNYELV------------ELPGCKGIWTVYHKSSRGHNADSSRMAAYDD- 573
A G K S ++ E P +G WTV K + +D
Sbjct: 568 LVCAVGRGKASALAIMNLAIQPKIIGRFEFPEARGFWTVCAKKPIPKTLVGDKGPMNNDY 627
Query: 574 ----EYHAYLIIS------LEARTMVLETADLLTEVTESVDYFVQGRTIAAGNLFGRRRV 623
+YH ++I++ E + TA +T + G T+ AG + R+
Sbjct: 628 DTSGQYHKFMIVAKVDLDGYETSDVYALTAAGFESLTGTEFEPAAGFTVEAGTMGKDSRI 687
Query: 624 IQVFERGARILDGSY-MTQDLSFGPSNSESGSGSENSTVLSVSIADPYVLLGMSDGSIRL 682
+QV + R DG ++Q + + E+G+ V + SIADP++LL D S+ +
Sbjct: 688 LQVLKSEVRCYDGDLGLSQIVPM--LDEETGA---EPRVRTASIADPFLLLIRDDFSVFI 742
Query: 683 LVGDPSTCTVSVQTPA-AIESSKKPVSSCTLYHDKGPEPWLRKTSTDAWLSTGVGEAIDG 741
P + I +S K ++ C LY D ++ + VG+
Sbjct: 743 AEMSPKLLELEEVEKEDQILTSTKWLAGC-LYTD----------TSGVFADETVGKGT-- 789
Query: 742 ADGGPLDQGDIYSVVCYESGALEIFDVPNFNCVFTVDKFVSGRTHIVDTYMREALKDSET 801
+ +I + SG L I+ +P+ V + +S Y+ L
Sbjct: 790 -------KDNILMFLLSTSGVLYIYRLPDLTKPVYVAEGLS--------YIPPGLS---- 830
Query: 802 EINSSSEEGTGQGRKENIHSMKVVELAMQRWSAHHSRPFLFAILTDGTILCYQAYLFEGP 861
+ ++ +GT KE++ + V +L H P+L + + YQ Y +
Sbjct: 831 -ADYAARKGTA---KESVAEILVADLG----DTTHKSPYLILRHANDDLTLYQPYRLK-- 880
Query: 862 ENTSKSDDPVSTSRSLSVSNVSASRLRNLRFSRTPLDAYTREETPHGA----PCQRITIF 917
+ + P S S + ++ N F++ P + ++ PH A P +R +
Sbjct: 881 ---ATAGQPFSKS-------LFFQKVPNSTFAKAPEEKPADDDEPHNAQRFLPMRRCS-- 928
Query: 918 KNISGHQGFFLSGSRPCWCMVFRERLRVHPQLCDGSIVAFTVLHNVNCNHGFIYVTSQGI 977
NISG+ FL GS P + + + L + A + H C HGFIY + GI
Sbjct: 929 -NISGYSTVFLPGSSPSFILKTAKSSPRVLSLQGSGVQAMSSFHTEGCEHGFIYADTNGI 987
Query: 978 LKICQLPSGSTYDNYWPVQKVIPLKATPHQITYFAEKNLYPLIVSVPVLKPLNQVLSLLI 1037
++ Q+P+ S+Y K IP+ + Y Y +V ++P L
Sbjct: 988 ARVTQIPTDSSYAELGLSVKKIPIGVDTQSVAYHPPTQAY--VVGCNDVEPFE----LPK 1041
Query: 1038 DQEVGHQIDNHNLSSVDLHRTYTVEEYEVRILEPDRAGGPWQTRATIPMQSSENALTVRV 1097
D + + N++ + V+ +++L +G W T+ M+ E L V
Sbjct: 1042 DDDYHKEWARENITFKPM-----VDRGVLKLL----SGITWTVIDTVEMEPCETVLCVET 1092
Query: 1098 VTL-FNTTTKENETLLAIGTAYVQGEDVAARGRVLLF 1133
+ L + +T E + L+A+GTA ++GED+ RGRV +F
Sbjct: 1093 LNLEVSESTNERKQLIAVGTALIKGEDLPTRGRVYVF 1129
>sp|A8XPU7|CPSF1_CAEBR Probable cleavage and polyadenylation specificity factor subunit 1
OS=Caenorhabditis briggsae GN=cpsf-1 PE=3 SV=1
Length = 1454
Score = 188 bits (477), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 150/576 (26%), Positives = 266/576 (46%), Gaps = 81/576 (14%)
Query: 130 RDSIILAFEDAKISVLEFDDSIHGLRITSMHCFESPEWLHLKRGRESFARGPLVKVDPQG 189
+DSI++ F+DAK+S++ ++ ++ S+H FE+ +L+ G ++ P+V+ DP
Sbjct: 92 QDSILMTFDDAKLSIVAVNEKERNMQTISLHAFENE---YLRDGFTTYFNPPIVRTDPAN 148
Query: 190 RCGGVLVYGLQMIILKASQGGSGLVGDEDTFGSGGGFSARIESSHVINLRDLD--MKHVK 247
RC LVYG + IL + ++ S++I L+ +D + +V
Sbjct: 149 RCAASLVYGKHIAILPFHENSKRIL------------------SYIIPLKQIDPRLDNVA 190
Query: 248 DFIFVHGYIEPVMVILHERELTWAGRVSWKHHTCMISALSISTTLKQHPLIWSAMNLPHD 307
D +F+ GY EP ++ L+E T GR ++ T I +S++ +Q ++W NLP D
Sbjct: 191 DMVFLEGYYEPTILFLYEPLQTTPGRACVRYDTMCIMGVSVNIVDRQFAVVWQTANLPMD 250
Query: 308 AYKLLAVPSPIGGVLVVGANTIHYHSQSA-SCALALNNYAVSLDSSQELP---RSSFSVE 363
LL++P P+GG +V G+NTI Y +Q+ C + LN+ D + P +
Sbjct: 251 CNSLLSIPKPLGGAVVFGSNTIVYLNQAVPPCGIVLNS---CYDGFTKFPLKDMKHLKMT 307
Query: 364 LDAAHATWLQNDVALLSTKTGDLVLLTVVYD--GRVVQRLDLSKTNPSVLTSDITTIGNS 421
LD + + ++++ + ++ GDL LL +V G V+ L+ SK + + +T
Sbjct: 308 LDCSTSVYMEDGRIAVGSREGDLYLLRLVTSSGGATVKSLEFSKVCDTSIAFTLTVCAPG 367
Query: 422 LFFLGSRLGDSLLVQFTCGSGTSMLSSGLKEEFGDIEADAPSTKRLRRSSSDALQDMVNG 481
F+GSRLGDS L+++T ++ S K+ R + + ++
Sbjct: 368 HLFVGSRLGDSQLLEYTL-----------------LKVTKESAKKQRLEQQNPSEIELDE 410
Query: 482 EELSLYGSA-----SNNTESAQKTFSFAVRDSLVNIGPLKDFSYGLRINADASATGISKQ 536
+++ LYG A +++ E ++ F D L+N+GP+K +G R N ++ +K+
Sbjct: 411 DDIELYGGAIEMQQNDDDEQISESLQFRELDRLLNVGPVKSMCFG-RPNYMSNDLIDAKR 469
Query: 537 SN--YELVELP--GCKGIWTVYHKSSRGHNADSSRMAA---------YDDEYHAYLIISL 583
+ ++LV G G V+ +S R SS + ++E H YLI+S
Sbjct: 470 KDPVFDLVTASGHGKNGALCVHQRSMRPEIITSSLLEGAEQLWAVGRKENESHKYLIVS- 528
Query: 584 EARTMVLETADLLTEVTESVDYFVQGRTIAAGNLFGRRRVIQVFERG-ARILDGSYMTQD 642
R+ ++ E + T+AAG L +QV A + DG M Q+
Sbjct: 529 RVRSTLILELGEELVELEEQLFVTNEPTVAAGELLQGALAVQVTSTCIALVTDGQQM-QE 587
Query: 643 LSFGPSNSESGSGSENSTVLSVSIADPYVLLGMSDG 678
+ N V+ SI DPYV + +G
Sbjct: 588 VHI----------DSNFPVVQASIVDPYVAVLTQNG 613
Score = 82.4 bits (202), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 107/442 (24%), Positives = 190/442 (42%), Gaps = 63/442 (14%)
Query: 723 RKTSTDAWLSTGVGEAIDGADGGPLDQGDIYS------VVCYESGALEIFDVPNFNCVFT 776
++ DA +S+ GE D +D YS VV +++G + I +P+ V+
Sbjct: 737 KRLGHDAIMSSRGGEQSDA-----IDPTRTYSSITHWLVVAHDNGRITIHSLPDLELVYQ 791
Query: 777 VDKFVSGRTHIVDTYMREALKDSETEINSSSEEGT--------GQGRKENIHSM------ 822
+ +F + +VD + E K+ + + ++ E+ + ++ ++S
Sbjct: 792 IGRFSNVPELLVDMTVEEEEKEKKAKQTAAQEKEKETEKKKDDAKNEEDQVNSEMKKLCE 851
Query: 823 KVVELAMQRWSAHHSRPFLFAILTDGTILCYQAYLFEGPENTSKSDDPVSTSRSLSVSNV 882
KVVE + + + P L AI+ D ++ Y+ + P+ V+ + + +
Sbjct: 852 KVVEAQIVGMGINQAHPVLIAII-DEEVVLYEMFASYNPQPGHLG---VAFRKLPHLIGL 907
Query: 883 SASRLRNLRFSRTPLDAYTREETPHGAPCQRITIFKNISG-HQGFFLSGSRPCWCMVFRE 941
S N+ R P + E HG I F+ IS + G + G+ P +V+
Sbjct: 908 RTSPYVNIDGKRAPFEM----EMEHGKRYTLIHPFERISSINNGVMIGGAVPT-LLVYGA 962
Query: 942 --RLRVHPQLCDGSIVAFTVLHNVNCNHGFIYVTSQ-GILKICQLPSGSTYDNYWPVQKV 998
++ H DGSI AFT +N N HGF+Y+T Q L+I ++ YD +PV+K
Sbjct: 963 WGGMQTHQMTIDGSIKAFTPFNNENVLHGFVYMTQQKSELRIARMHPDFDYDMPYPVKK- 1021
Query: 999 IPLKATPHQITYFAEKNLYPLIVSVPVLKPLNQVLSLLID--QEVGHQIDNHNLSSVDLH 1056
I + T H + Y ++Y ++ SVP KP N++ ++ D QE H+ D + + +
Sbjct: 1022 IEVGKTVHNVRYLMNSDIYAVVSSVP--KPSNKIWVVMNDDKQEEIHEKDENFV--LPAP 1077
Query: 1057 RTYTVEEYEVRILEPDRAGGPWQTRATIPMQSSENALTVRVVTLFNTTTKEN------ET 1110
YT+ + Q A +P E V + + K +T
Sbjct: 1078 PKYTLNLFSS------------QDWAAVPNTEFEFEDMEAVTAMEDVPLKSESRYGGLDT 1125
Query: 1111 LLAIGTAYVQGEDVAARGRVLL 1132
LA+ T GE+V RGR++L
Sbjct: 1126 YLALATVNNYGEEVLVRGRIIL 1147
>sp|Q9N4C2|CPSF1_CAEEL Probable cleavage and polyadenylation specificity factor subunit 1
OS=Caenorhabditis elegans GN=cpsf-1 PE=3 SV=2
Length = 1454
Score = 186 bits (471), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 162/589 (27%), Positives = 273/589 (46%), Gaps = 84/589 (14%)
Query: 130 RDSIILAFEDAKISVLEFDDSIHGLRITSMHCFESPEWLHLKRGRESFARGPLVKVDPQG 189
+DSI++ F+DAK+S++ ++ ++ S+H FE+ +L+ G + + PLV+ DP
Sbjct: 92 QDSILMTFDDAKLSIVSINEKERNMQTISLHAFENE---YLRDGFINHFQPPLVRSDPSN 148
Query: 190 RCGGVLVYGLQMIILKASQGGSGLVGDEDTFGSGGGFSARIESSHVINLRDLD--MKHVK 247
RC LVYG + IL + S RI S +VI L+ +D + ++
Sbjct: 149 RCAACLVYGKHIAILPFHEN-----------------SKRIHS-YVIPLKQIDPRLDNIA 190
Query: 248 DFIFVHGYIEPVMVILHERELTWAGRVSWKHHTCMISALSISTTLKQHPLIWSAMNLPHD 307
D +F+ GY EP ++ L+E T GR ++ T I +S++ +Q ++W NLP D
Sbjct: 191 DMVFLDGYYEPTILFLYEPIQTTPGRACVRYDTMCIMGVSVNIVDRQFAVVWQTANLPMD 250
Query: 308 AYKLLAVPSPIGGVLVVGANTIHYHSQSA-SCALALNNYAVSLDSSQELPRSS---FSVE 363
+LL +P P+GG LV G+NT+ Y +Q+ C L LN+ D + P +
Sbjct: 251 CSQLLPIPKPLGGALVFGSNTVVYLNQAVPPCGLVLNS---CYDGFTKFPLKDLKHLKMT 307
Query: 364 LDAAHATWLQNDVALLSTKTGDLVLLTVVYD--GRVVQRLDLSKTNPSVLTSDITTIGNS 421
LD + + ++++ + ++ GDL LL ++ G V+ L+ SK + + +T
Sbjct: 308 LDCSTSVYMEDGRIAVGSRDGDLFLLRLMTSSGGGTVKSLEFSKVYETSIAYSLTVCAPG 367
Query: 422 LFFLGSRLGDSLLVQFTCGSGTSMLSSGLKEEFGDIEADAPSTKRLRRSSSD--ALQDMV 479
F+GSRLGDS L+++T T + KRL+ + D A + +
Sbjct: 368 HLFVGSRLGDSQLLEYTLLKTTRDC----------------AVKRLKIDNKDPAAAEIEL 411
Query: 480 NGEELSLYGSA-----SNNTESAQKTFSFAVRDSLVNIGPLKDFSYGLRINADASATGIS 534
+ +++ LYG A +++ E ++ F D L N+GP+K G R N ++ +
Sbjct: 412 DEDDMELYGGAIEEQQNDDDEQIDESLQFRELDRLRNVGPVKSMCVG-RPNYMSNDLVDA 470
Query: 535 KQSN--YELVELP--GCKGIWTVYHKSSRGHNADSSRMAA---------YDDEYHAYLII 581
K+ + ++LV G G V+ +S R SS + ++E H YLI+
Sbjct: 471 KRRDPVFDLVTASGHGKNGALCVHQRSLRPEIITSSLLEGAEQLWAVGRKENESHKYLIV 530
Query: 582 SLEARTMVLETADLLTEVTESVDYFVQGRTIAAGNLFGRRRVIQVFERG-ARILDGSYMT 640
S R+ ++ E + T+AAG L +QV A + DG M
Sbjct: 531 S-RVRSTLILELGEELVELEEQLFVTGEPTVAAGELSQGALAVQVTSTCIALVTDGQQM- 588
Query: 641 QDLSFGPSNSESGSGSENSTVLSVSIADPYVLLGMSDGSIRL--LVGDP 687
Q++ N V+ SI DPYV L +G + L LV +P
Sbjct: 589 QEVHI----------DSNFPVIQASIVDPYVALLTQNGRLLLYELVMEP 627
Score = 70.5 bits (171), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 96/399 (24%), Positives = 174/399 (43%), Gaps = 49/399 (12%)
Query: 755 VVCYESGALEIFDVPNFNCVFTVDKFVSGRTHIVD-TYMREALKDSETEINSSSEEGTGQ 813
+V +E+G L I +P V+ + +F + +VD T E + ++ E
Sbjct: 777 IVSHENGRLSIHSLPEMEVVYQIGRFSNVPELLVDLTVEEEEKERKAKAQQAAKEASVPT 836
Query: 814 GRKENIHSM------KVVELAMQRWSAHHSRPFLFAILTDGTILCYQAYLFEGPENTSKS 867
E +++ +V+E + + + P L AI+ D ++ Y+ + S
Sbjct: 837 DEAEQLNTEMKQLCERVLEAQIVGMGINQAHPILMAIV-DEQVVLYEMF---------SS 886
Query: 868 DDPVSTSRSLSVSNV-------SASRLRNLRFSRTPLDAYTREETPHGAPCQRITIFKNI 920
+P+ +S + ++S L N R P + + +G I F+ +
Sbjct: 887 SNPIPGHLGISFRKLPHFICLRTSSHL-NSDGKRAPFEM----KINNGKRFSLIHPFERV 941
Query: 921 SG-HQGFFLSGSRPCWCMVFRE--RLRVHPQLCDGSIVAFTVLHNVNCNHGFIYVTS-QG 976
S + G + G+ P +V+ ++ H DG I AFT +N N HG +Y+T +
Sbjct: 942 SSVNNGVMIVGAVPTL-LVYGAWGGMQTHQMTVDGPIKAFTPFNNENVLHGIVYMTQHKS 1000
Query: 977 ILKICQLPSGSTYDNYWPVQKVIPLKATPHQITYFAEKNLYPLIVSVPVLKPLNQVLSLL 1036
L+I ++ Y+ +PV+K I + T H + Y ++Y ++ S+P KP N++ ++
Sbjct: 1001 ELRIARMHPDFDYEMPYPVKK-IEVGRTIHHVRYLMNSDVYAVVSSIP--KPSNKIWVVM 1057
Query: 1037 ID--QEVGHQIDNHNLSSVDLHRTYTVEEYEVRILEPDRAGGPWQTRATIPMQSSENALT 1094
D QE H+ D + + + YT+ + + D A P I + E
Sbjct: 1058 NDDKQEEIHEKDENFV--LPAPPKYTLNLFSSQ----DWAAVP---NTEISFEDMEAVTA 1108
Query: 1095 VRVVTLFNTTTKEN-ETLLAIGTAYVQGEDVAARGRVLL 1132
V L + +T ETLLA+GT GE+V RGR++L
Sbjct: 1109 CEDVALKSESTISGLETLLAMGTVNNYGEEVLVRGRIIL 1147
>sp|Q2TZ19|CFT1_ASPOR Protein cft1 OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40)
GN=cft1 PE=3 SV=1
Length = 1393
Score = 160 bits (406), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 250/1101 (22%), Positives = 432/1101 (39%), Gaps = 182/1101 (16%)
Query: 131 DSIILAFEDAKISVLEFDDSIHGLRITSMHCFESPEWLHLKRGRESFARGPLVKVDPQGR 190
++I+LAF +AK++++E+D +G+ S+H +E + + + G ++ VDP R
Sbjct: 88 EAILLAFRNAKLALIEWDPGRYGICTISIHYYERDDSTSSPWVPDLSSCGSILSVDPSSR 147
Query: 191 CGGVLVYGLQ-MIILKASQGGSGLVGDE------DTFGSGG--------------GFSAR 229
C V +G++ + IL Q G LV D+ + GS G A
Sbjct: 148 CA-VFNFGIRNLAILPFHQPGDDLVMDDYGELDDERLGSHGLESGTDCDMTKESIAHRAP 206
Query: 230 IESSHVINLRDLD--MKHVKDFIFVHGYIEPVMVILHERELTWAGRVSWKHHTCMISALS 287
SS V+ L LD + H F++ Y EP IL+ + T + + + +
Sbjct: 207 YSSSFVLPLAALDPSILHPISLAFLYEYREPTFGILYSQVATSNALLHERKDVVFYTVFT 266
Query: 288 ISTTLKQHPLIWSAMNLPHDAYKLLAVPSPIGGVLVVGANT-IHYHSQSASCALALNNYA 346
+ + + S LP D +K++A+P P+GG L++G+N +H + A+ +N ++
Sbjct: 267 LDLEQRASTTLLSVSRLPSDLFKVVALPPPVGGALLIGSNELVHVDQAGKTNAVGVNEFS 326
Query: 347 VSLDSSQELPRSSFSVELDAAHATWLQ--NDVALLSTKTGDLVLLTVVYDGRVVQRLDLS 404
+ S +S ++ L+ L N LL TG++VL+ DGR V + +
Sbjct: 327 RQVSSFSMTDQSDLALRLEGCIVERLSETNGDLLLVPTTGEIVLVKFRLDGRSVSGISVH 386
Query: 405 KTNPSV-------LTSDITTIGNSLFFLGSRLGDSLLVQFTCGSGTSMLSSGLKE---EF 454
P S +G+ FLGS DS+L+ G S+ SSG K+ +
Sbjct: 387 PIPPHAGGDIVKSAASSSAFLGDKRVFLGSEDADSILL------GWSVPSSGTKKPRPQA 440
Query: 455 GDIEADAPSTKRLRRSSSDALQDMVNG--EELSLYGSASNNTESAQKTFSFAVRDSLVNI 512
E D+ +S D +D + E+ + G + ++F D L+NI
Sbjct: 441 RHTEEDSGGFSDEDQSEDDVYEDDLYATVPEVVVDGRRPSAESFGSSLYNFREYDRLLNI 500
Query: 513 GPLKDFSYGLRINADASATGISKQSNYELV----------------------------EL 544
GPLKD ++G + S ELV +L
Sbjct: 501 GPLKDIAFGRSFTSLGGEENAGNDSGLELVASQGWDRSGGLAVMKRGLELQVLNSMRTDL 560
Query: 545 PGCKGIWTVYHKSSRGHNADS---SRMAAYDDEYHAYLIISLEARTMVLETADLLTEVTE 601
C +WT +S H ++ + A + E H Y+++S +A + E +++ +
Sbjct: 561 ASC--VWT----ASVAHMEEAVSKTTTQAENRECHQYVVVS-KATSAEREQSEVFRVEGQ 613
Query: 602 SVDYFV-------QGRTIAAGNLFGRRRVIQVFERGARILDGSYMTQDLSFG---PSNSE 651
+ F + TI G L G+ RV+Q+ R DG DL P E
Sbjct: 614 ELRPFRAPEFNPNEDVTIDIGTLIGKNRVVQILRSEVRSYDG-----DLGLAQIYPVWDE 668
Query: 652 SGSGSENSTVLSVSIADPYVLLGMSDGSIRLLVGDPSTCTVSVQTPAAIESSKKPVSSCT 711
SE +S S+ DPYV + D ++ LL D S V+ I +SK +SC
Sbjct: 669 --DTSEERMAISSSLVDPYVAILRDDSTLLLLQADDSGDLDEVELNEQIANSKW--TSCC 724
Query: 712 LYHDKGPEPWLRKTSTDAWLSTGVGEAIDGADGGPLDQGDIYSVVCYESGALEIFDVPNF 771
LY DK TG+ +I A L Q + + + L I+ +P+
Sbjct: 725 LYFDK----------------TGIFSSI-SATSDELAQNSMTLFLMTQDCRLFIYRLPDQ 767
Query: 772 NCVFTVDKFVSGRTHIVDTYMREALKDSETEINSSSEEGTGQGRKENIHSMKVVELAMQR 831
+ + G + E K S T +E + + V +L
Sbjct: 768 KLL----AIIEGVDCLPPVLSSEPPKRSTT--------------REVLTEIVVADLG-DS 808
Query: 832 WSAHHSRPFLFAILTDGTILCYQAYLFEGPENTSKSDDPVSTSRSLSVSNVSASRLRNLR 891
WS S P+L + Y+ ++ T +P + L +N+ R+
Sbjct: 809 WS---SFPYLIIRSRHDDLAVYRPFI----SITKSVGEPHADLNFLKETNLVLPRI---- 857
Query: 892 FSRTPLDAYTREETPHGAPCQRITIFKNISGHQGFFLSGSRPCWCMVFRERLRVHPQLCD 951
+ D + EE P + I NISG F G P + + L
Sbjct: 858 -TSGVEDQSSTEEVIKSVP---LRIVSNISGFSAIFRPGVSPGFIVRTSTSSPHFLGLKG 913
Query: 952 GSIVAFTVLHNVNCNHGFIYVTSQGI------LKICQLPSGSTYDNYWP--VQKVIPLKA 1003
G + + C GFI + S+ + L C L + +Y+P +Q+ IP+
Sbjct: 914 GYAQSLSKFQTSECGEGFILLDSKVLCFILLCLTYCILSFHTGCHSYYPWTIQQ-IPIGE 972
Query: 1004 TPHQITYFAEKNLYPLIVSVPVLKPLNQVLSLLIDQEVGHQIDNHNLSSVDLHRTYTVEE 1063
+ Y + +Y + S L D E+ + N S V+
Sbjct: 973 QVDHLAYSSSSGMYVIGTS------HRTEFKLPEDDELHPEWRNEMTSFFP-----EVQR 1021
Query: 1064 YEVRILEPDRAGGPWQTRATIPMQSSENALTVRVVTL-FNTTTKENETLLAIGTAYVQGE 1122
++++ P W T+ +E+ + V+ ++L + T E + ++ +GTA+ +GE
Sbjct: 1022 SSLKVVSPKT----W----TVIDSPAEHVMAVKNMSLEISENTHERKDMIVVGTAFARGE 1073
Query: 1123 DVAARGRVLLFSTGRNADNPQ 1143
D+A+RG V +F + +P+
Sbjct: 1074 DIASRGCVYVFEVIKVVPDPK 1094
>sp|O74733|CFT1_SCHPO Protein cft1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=cft1 PE=3 SV=1
Length = 1441
Score = 160 bits (405), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 268/1202 (22%), Positives = 469/1202 (39%), Gaps = 214/1202 (17%)
Query: 57 NLVVTAANVIEIYVV-RVQEEGS-----------------KESKNSGETKRRVL-MDGIS 97
NLVV+ N + ++ + ++Q++ S ES+ ET ++ + +
Sbjct: 29 NLVVSKVNSLHLFEIEKIQKDESSFPLDDSLQNEFSTSIIDESQAFMETNMHLIRTNEQT 88
Query: 98 AASLELVCHYRLHGNVESLAILSQGGADNSRRRDSIILAFEDAKISVLEFDDSIHGLRIT 157
L LV ++ G + ++ L G++ D +I+ + AK+S LE+D
Sbjct: 89 TYVLRLVSQVKVFGTITEISALKGKGSNGC---DLLIMLTDYAKVSTLEWDMQSQSFVTN 145
Query: 158 SMHCFESPEWLHLKRGRESFARGPL-VKVDPQGRCGGVLVYGLQMIILKASQGGSGLVGD 216
S+H +E +K + P + VDP C +L + M+ + L +
Sbjct: 146 SLHYYED-----VKSSNICSSHTPTQLLVDPDSDCC-LLRFLTDMMAIIPYPANEDLDME 199
Query: 217 EDTF-GSGGGFSARIESSHVINLRDLD--MKHVKDFIFVHGYIEPVMVILHERELTWAGR 273
E S S + S V+ LD + + D F++GY EP + IL+ E T
Sbjct: 200 EAAIENSKISSSYAYKPSFVLASSQLDASISRILDVKFLYGYREPTLAILYSPEQTSTVT 259
Query: 274 VSWKHHTCMISALSISTTLKQHPLIWSAMNLPHDAYKLLAVPSPIGGVLVVGANTIHY-H 332
+ + T + S +++ + +I + +LP+D Y +++P+P+GG L++G N + Y
Sbjct: 260 LPLRKDTVLFSLVTLDLEQRASAVITTIQSLPYDIYASVSIPTPLGGSLLLGGNELIYVD 319
Query: 333 SQSASCALALNNYAVSLDSSQELPRSSFSVELDAAHATWL-----QNDVALLSTKTGDLV 387
S + + +N+Y +S F++EL+ A L + +L +G
Sbjct: 320 SAGRTVGIGVNSYYSKCTDFPLQDQSDFNLELEGTIAIPLTSSKTETPFVVLVHTSGQFF 379
Query: 388 LLTVVYDGRVVQRLDLS----KTNPSVLTSDITTI---GNSLFFLGSRLGDSLLVQFTCG 440
L + DG+ V+ L L + N L S IT G +L FLGS+ DS L++++
Sbjct: 380 YLDFLLDGKSVKGLSLQALDLEINDDFLKSGITCAVPAGENLVFLGSQTTDSYLLRWSRR 439
Query: 441 SGTSMLSSGLKEEFGDIEADAPSTKRLRRSSSDALQDMVNGEELSLYGSASNNTESAQKT 500
+ EE E D L ++ + DM++ E +
Sbjct: 440 TT--------NEEVRLDEGD----DTLYGTNDAEMDDMLDIYETDESVGSKRKIAYENGP 487
Query: 501 FSFAVRDSLVNIGPLKDFSYGLRINADASATGISKQSNY---ELV--------------- 542
+ D L NIGP+ DF+ G A + Q N+ ELV
Sbjct: 488 LRLEICDVLTNIGPITDFAVG-----KAGSYSYFPQDNHGPLELVGTAGADGAGGLVVFR 542
Query: 543 -----------ELPGCKGIWTVYHKSSRGHNADSSRMAAYDD-EYHAYLIISLEARTMVL 590
+ GC+ +WTV S + N S A Y + E YL++S E + +
Sbjct: 543 RNIFPLIAGEFQFDGCEALWTV-SISGKLRNMKSRIQAQYSNPELETYLVLSKEKESFIF 601
Query: 591 ETADLLTEVTESVDYFVQGRTIAAGNLFGRRRVIQVFERGARILDGSY-MTQDLSFGPSN 649
+ EV S D+ +T+ G+L R++Q+ R+ D + +TQ +F
Sbjct: 602 LAGETFDEVQHS-DFSKDSKTLNVGSLLSGMRMVQICPTSLRVYDSNLRLTQLFNF---- 656
Query: 650 SESGSGSENSTVLSVSIADPYVLLGMSDGSI----------RLLVGDPSTCTVSVQTPAA 699
S+ V+S SI DP +++ G I RL+ D V+T A+
Sbjct: 657 ------SKKQIVVSTSICDPCIIVVFLGGGIALYKMDLKSQRLIKTDLQNRLSDVKT-AS 709
Query: 700 IESSKKPVSSCTLY----------------HDKGPEPWL-----RKTSTDAWLSTGVGEA 738
+ S L+ +D E L KTS + + G ++
Sbjct: 710 LVSPDSSALFAKLFTYNETLNAKGQIANGMNDSASETDLDIQPNHKTSNNDQM--GYDQS 767
Query: 739 IDGADGGP--------------LDQGDIYS----VVCYESGALEIFDVPNFNCVFTVDKF 780
+ AD P LDQ + + G L+++++ +F+ + D F
Sbjct: 768 V-SADDVPEVDNTIVTEKNVSNLDQESLEKHPILFALTDEGKLKVYNLADFSLLMECDVF 826
Query: 781 VSGRTHIVDTYMREALKDSETEINSSSEEGTGQGRKENIHSMKVVELAMQRWSAHHSRPF 840
T + ++ T N S S ++VEL + P
Sbjct: 827 DLPPT------LFNGMESERTYFNKES-------------SQELVELLVADLGDDFKEPH 867
Query: 841 LFAILTDGTILCYQAYLFEGPENTSKSDDPVSTSRSLSVSNVSASRLRNLRFSRTPLDAY 900
LF I Y+A+L+ NT K + ++ ++ V + +R TP DA
Sbjct: 868 LFLRSRLNEITVYKAFLYS---NTDKHKNLLAFAK---VPQETMTREFQANVG-TPRDAE 920
Query: 901 TREETPHGAPCQ--RITIFKNISGHQGFFLSGSRPCWCM-VFRERLRVHPQLCDGSIVAF 957
+ E + ++T + + H F++G +P + + P + I++
Sbjct: 921 STMEKKASSSVDHLKMTALEVVGNHSAVFVTGRKPFLILSTLHSNAKFFPISSNIPILSV 980
Query: 958 TVLHNVNCNHGFIYVTSQGILKICQLPSGSTYDNYWPVQKVIPLKATPHQITYFAEKNLY 1017
H + G+IYV ++IC+ YDN WP +KV L + I Y K +Y
Sbjct: 981 APFHAHHAPQGYIYVDENSFIRICKFQEDFEYDNKWPYKKV-SLGKQINGIAYHPTKMVY 1039
Query: 1018 PLIVSVPVLKPL-----NQVLSLLIDQEVGHQIDNHNLSSVDLHRTYTVEEYEVRILEPD 1072
+ +VP+ + N+ ++ D + + N S+DL T
Sbjct: 1040 AVGSAVPIEFKVTDEDGNEPYAITDDNDY---LPMANTGSLDLVSPLT------------ 1084
Query: 1073 RAGGPWQTRATIPMQSSENALTVRVVTL-FNTTTKENETLLAIGTAYVQGEDVAARGRVL 1131
W + Q E L+V +V L + TTK + +A+GT+ +GED+A RG
Sbjct: 1085 -----WTVIDSYEFQQFEIPLSVALVNLEVSETTKLRKPYIAVGTSITKGEDIAVRGSTY 1139
Query: 1132 LF 1133
LF
Sbjct: 1140 LF 1141
>sp|Q5BDG7|CFT1_EMENI Protein cft1 OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 /
CBS 112.46 / NRRL 194 / M139) GN=cft1 PE=3 SV=1
Length = 1339
Score = 151 bits (381), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 256/1156 (22%), Positives = 444/1156 (38%), Gaps = 210/1156 (18%)
Query: 57 NLVVTAANVIEIYVVRVQEEGSKESKNSGETKRRVLMDGISAASLELVCHYRLHGNVESL 116
NL+V ++++I+ +R S ++ +T+ R L L Y+L G V +
Sbjct: 28 NLIVARTSLLQIFSLR------DVSLSALDTEVRPAQHRQETCKLVLEREYQLPGTVTDI 81
Query: 117 A----ILSQGGADNSRRRDSIILAFEDAKISVLEFDDSIHGLRITSMHCFESPEWLHLKR 172
+ ++ G D ++++AF DAK+S++E+D +GL S+H +E +
Sbjct: 82 CRVKILKTKSGGD------AVLVAFRDAKLSLVEWDPERYGLSTISIHYYERDDMTRSPW 135
Query: 173 GRESFARGPLVKVDPQGRCGGVLVYGLQMIILKASQGGSGLVGDEDTFGSGGGFSARIE- 231
+ G ++ DP RC + I+ Q G LV D+ FGS + R+E
Sbjct: 136 ASDLSTCGSILSADPGSRCAIFQFGARSLAIIPFHQPGDDLVMDD--FGSEPDYENRVEG 193
Query: 232 --------------------SSHVINLRDLD--MKHVKDFIFVHGYIEPVMVILHERELT 269
SS V+ L LD + H F++ Y EP IL+ + T
Sbjct: 194 NSRSHEAKDKDAAEYQTPYASSFVLPLTALDPSVIHPISLAFLYEYREPTFGILYSQVAT 253
Query: 270 WAGRVSWKHHTCMISALSISTTLKQHPLIWSAMNLPHDAYKLLAVPSPIGGVLVVGANT- 328
+ + + +++ + + S LP D +K++A+P P+GG L++G+N
Sbjct: 254 SHALLHERKDVVFYTVITLDLEQRASTTLLSVTRLPSDLFKVVALPPPVGGSLLIGSNEL 313
Query: 329 IHYHSQSASCALALNNYAVSLDSSQELPRSSFSVELDAAHATWLQNDVA--LLSTKTGDL 386
+H + A+ +N ++ S +S ++ L+ +D LL+ TG
Sbjct: 314 VHIDQAGKTNAVGVNEFSRQASSFSMTDQSDLALRLENCVVERFSDDNGDLLLALSTGVF 373
Query: 387 VLLTVVYDGRVVQRLD---LSKTNPSVLTSDITT---IGNSLFFLGSRLGDSLLVQFTCG 440
L++ DGR V + LS + L S ++ +GN F GS DS+L+
Sbjct: 374 ALVSFKLDGRSVSGISVRPLSGPSKEFLASTASSSAFLGNGKVFFGSESADSVLL----- 428
Query: 441 SGTSMLSSGLKEEF-GDIEADAPSTKRLRRSSSDALQDMVNGEELSLYGSASNNTESAQK 499
G S SS K+ F G D S DA +D + + N S
Sbjct: 429 -GWSSASSATKKSFSGSTSND--------ESEDDAYEDDLYSSAPAAMTDNPQNQPSNSS 479
Query: 500 TFSFA---VRDSLVNIGPLKDFSYGLRINADASATGISKQSNYELVELPGCK--GIWTVY 554
+F + D L + GP++D G A + T K ELV G G +
Sbjct: 480 VAAFGDLRIHDRLSSPGPIRDIVLGRSSEASSRDT---KDGVLELVAAQGSDEGGTMVIM 536
Query: 555 HK--------SSRGHNADS----SRMAAYDDEYHAYLIISL-------EARTMVLETADL 595
+ S A+S S + +D+ Y+I+S E+ VLE D
Sbjct: 537 KREVDPYLVASMAADTANSLWTVSLLPDNNDQKRDYVILSKQEKPDKEESEVFVLE--DK 594
Query: 596 LTEVTESVDYFVQGRTIAAGNLFGRRRVIQVFERGARILDGSYMTQDLSFGPSNSESGSG 655
L +T T+ G L + RVIQV R D + D
Sbjct: 595 LRPITAPEFNPNHELTVEIGTLASKSRVIQVLRNEVRSYDAVWDEDD------------- 641
Query: 656 SENSTVLSVSIADPYVLLGMSDGSIRLLVGDPSTCTVSVQTPAAIESSKKPVSSCTLYHD 715
S+ ++ ++ DPY+ + D ++ LL D S + TL D
Sbjct: 642 SDERVAVNATLVDPYLAIIRDDSTLLLLQADDS----------------GDLDEVTLSED 685
Query: 716 KGPEPWLRKT--STDAWLSTGVGEAIDGADGGPLDQGDIYSVVCYESGALEIFDVPNFNC 773
+ WL S +A T +I + + L ++ +P+F
Sbjct: 686 VVSQKWLSACFYSDNAGFFTAPFASI--------------LFLLNQDHQLYVYRLPDF-A 730
Query: 774 VFTVDKFVSGRTHIVDTYMREALKDSETEINSSSEEGTGQGRKENIHSMKVVELAMQRWS 833
V +V + V I+ T E K S T +EN+ + VVEL
Sbjct: 731 VISVIEGVGCLPPILST---EPPKRSTT--------------RENVLQIAVVELG----D 769
Query: 834 AHHSRPFLFAILTDGTILCYQAYLFEGPENTSKSDDPVSTSRSLSVSNVSASRLRNLRFS 893
++ S PFL + ++ Y+ + E T R L +N + + N
Sbjct: 770 SYSSLPFLILRTENDDLVVYKPFFTNSKELTGL--------RFLKEANHTLPKTPNTT-- 819
Query: 894 RTPLDAYTREETPHGAPCQRITIFKNISGHQGFFLSGSRPCWCMVFRERLRVHP---QLC 950
D E P + I NI+G F+ G P +FR P +L
Sbjct: 820 ----DELQSEMKP-------LRILPNIAGCSSIFMPG--PSAGFIFRAS-TTSPHFIRLR 865
Query: 951 DGSIVAFTVLHNVNCNHGFIYVTSQGILKICQLPSGSTYDNYWPVQKVIPLKATPHQITY 1010
G I + + GF Y+ S G L + +LP G+ W + + +P+ ++TY
Sbjct: 866 GGFIKGLGCFD--SPDKGFAYLDSHG-LHLAKLPEGTQLGYPW-IMRTVPIGQQIDKLTY 921
Query: 1011 FAEKNLYPLIVSVPVLKPLNQV-LSLLIDQEVGHQIDNHNLSSVDLHRTYTVEEYEVRIL 1069
+ + Y VL + L D E+ + N +S + V + ++++
Sbjct: 922 VSASDTY-------VLGTCQRCEFRLPEDDELHPEWRNEEISFLP-----EVNQSSLKVV 969
Query: 1070 EPDRAGGPWQTRATIPMQSSENALTVRVVTL-FNTTTKENETLLAIGTAYVQGEDVAARG 1128
P W + P++ +E+ + ++ ++L + T E ++ +GT+ +GED+ +RG
Sbjct: 970 SPKT----WSVIDSYPLEPAEHIMVMKTMSLEVSENTHERRDMIVVGTSLARGEDIPSRG 1025
Query: 1129 RVLLFSTGRNADNPQN 1144
+ +F +P+
Sbjct: 1026 CIYVFEVIEVVPDPEQ 1041
>sp|A2R919|CFT1_ASPNC Protein cft1 OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513)
GN=cft1 PE=3 SV=1
Length = 1383
Score = 136 bits (343), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 236/1168 (20%), Positives = 459/1168 (39%), Gaps = 190/1168 (16%)
Query: 57 NLVVTAANVIEIYVVRVQEEGSKESKNSGETKRRVLMDGISAASLELVCHYRLHGNVESL 116
+L+V ++++IY + + E ++ + ++L++ Y L G V L
Sbjct: 28 DLIVVRTSLLQIYSLH-KVASHAEGADAQQESTKLLLEK----------EYSLSGTVTGL 76
Query: 117 A----ILSQGGADNSRRRDSIILAFEDAKISVLEFDDSIHGLRITSMHCFESPEWLHLKR 172
+ S+ G + ++++AF +AK+S++E+D G+ S+H +E +
Sbjct: 77 CRVKVLNSKSGGE------AVLVAFRNAKLSLIEWDPERRGISTISIHYYERDDLTRSPW 130
Query: 173 GRESFARGPLVKVDPQGRCGGVLVYGLQ-MIILKASQGGSGLVGDEDTFGS--------- 222
+ G ++ VDP RC + +G++ + I+ Q G LV D+ +GS
Sbjct: 131 VPDLNNCGSILSVDPSSRCA-IFNFGIRNLAIIPFHQPGDDLVMDD--YGSDLGEGISTD 187
Query: 223 ---GGG-----------FSARIESSHVINLRDLD--MKHVKDFIFVHGYIEPVMVILHER 266
GGG + S V+ L LD + H F++ Y EP IL+ +
Sbjct: 188 HDLGGGTVADKAKEGIVYQTPYAPSFVLPLTTLDPSILHPISLAFLYEYREPTFGILYSQ 247
Query: 267 ELTWAGRVSWKHHTCMISALSISTTLKQHPLIWSAMNLPHDAYKLLAVPSPIGGVLVVGA 326
T + + + + ++ + ++ S LP D ++++A+P P+GG L++G+
Sbjct: 248 VATSSALLPERKDVVFYTVFTLDLEQQASTVLLSVSRLPSDLFRVVALPPPVGGALLIGS 307
Query: 327 NT-IHYHSQSASCALALNNYAVSLDSSQELPRSSFSVELDAAHATWLQNDVA--LLSTKT 383
N +H + A+ +N ++ + S +S ++ L+ L + LL T
Sbjct: 308 NELVHIDQAGKTNAVGVNEFSRQVSSFSMTDQSDLALRLENCIVECLGDSSGDMLLVLTT 367
Query: 384 GDLVLLTVVYDGRVVQRLDLSKTNPSVLTSDI-------TTIGNSLFFLGSRLGDSLLVQ 436
G++ ++ DGR V + + + I T IG+ FLGS GDS+L+
Sbjct: 368 GEMAIVKFKLDGRSVSGISVHLLPAHAGLTSIYSAAAASTFIGDGKIFLGSEDGDSVLLG 427
Query: 437 FTCGSGTSMLSSGLKEEFGDIEADAPSTKRLRRSSSDALQDMV--NGEELSLYGSASNNT 494
++ S ++ ++ D AD +S D +D + + +L G +
Sbjct: 428 YSYSSSSTKKHRLQAKQVIDDSADMSEED---QSDDDVYEDDLYSTSPDTTLTGRRPSGE 484
Query: 495 ESAQKTFSFAVRDSLVNIGPLKDFSYGLRINADASATGISKQSNYELVELPGCKGI---- 550
SA + F + D L+NIGPL+D + G R++ + TG S +++ +G
Sbjct: 485 SSAFGLYDFRIHDKLINIGPLRDITMGKRLSTNLEKTGDRTNSTSPELQIVASQGSHKSG 544
Query: 551 -WTVYHKSSRGHNADSSRMAAYDDEYHAYLIISLEA-------------RTMVLETADLL 596
V + H S + + D + A L EA R V+ T
Sbjct: 545 GLVVMAREIDPHVVASISLESVDCIWTASLTREEEAVSGTSEKMGQQSQRCYVIATEVKG 604
Query: 597 TEVTESVDYFVQGR----------------TIAAGNLFGRRRVIQVFERGARILDGSY-M 639
++ ES+ + V G TI+ G R+RV+QV + R D +
Sbjct: 605 SDREESLIFVVDGHDLKPFRAPDFNPNEDVTISVGTQESRKRVVQVLKNEVRSYDFDLSL 664
Query: 640 TQDLSFGPSNSESGSGSENSTVLSVSIADPYVLLGMSDGSIRLLVGDPSTCTVSVQTPAA 699
TQ ++ ++ +S S+AD + + D ++ L D S V
Sbjct: 665 TQIYPIWDDDT-----NDERMAVSASLADSCLAILRDDSTLLFLQADDSGDLDEVVFGED 719
Query: 700 IESSKKPVSSCTLYHDKGPEPWLRKTSTDAWLSTGVGEAIDGADGGPLDQGDIYSVVCYE 759
+ S K SC LY DK TG+ +ID P+ + D++ +
Sbjct: 720 VASGK--WISCCLYSDK----------------TGMFSSIDRTLSEPV-KNDMFLFLLSH 760
Query: 760 SGALEIFDVPNFNCVFTVDKFVSGRTHIVDTYMREALKDSETEINSSSEEGTGQGRKENI 819
L ++ V + + ++ + G + ++ SSE G +EN+
Sbjct: 761 DCKLFVYRVRD-QKLLSIIEGTDGLSPLL-----------------SSEPPKRSGTRENL 802
Query: 820 HSMKVVELAMQRWSAHHSRPFLFAILTDGTILCYQAYLFEGPENTSKSDDPVSTSRSLSV 879
V +L + WSA P+L ++ Y+ ++ VST +
Sbjct: 803 IEAIVADLG-ETWSAS---PYLILRSETDDLIIYKPFV-------------VSTGPVEGI 845
Query: 880 SNVSASRLRNLRFSRTPLDAYTREETPHGAPCQRITIFKNISGHQGFFLSGSRPCWCMVF 939
++ S+ N R P + + + + + I +ISG F+ G+ + +
Sbjct: 846 HSLKFSKETNSVLPRIPPGVSSTQPSGSDYRARPLRILPDISGLSAVFMPGASAGFII-- 903
Query: 940 RERLRVHPQLCDGSIVAFTVLHNVNCNHGFIYVTSQGILKICQLPSGSTYDNYWPVQKVI 999
S F L N + ++ C+LP + +D W +++V
Sbjct: 904 ---------RTSASAPHFLRLRGEN--------SRSSTVRFCKLPPMTRFDYQWTLKRVH 946
Query: 1000 PLKATPHQITYFAEKNLYPLIVSVPVLKPLNQV-LSLLIDQEVGHQIDNHNLSSVDLHR- 1057
+ H + Y +Y VL + L D E+ + N +S R
Sbjct: 947 LGEQVDH-LAYSTSSGMY-------VLGTCHATDFKLPEDDELHPEWRNEAISFFPSARG 998
Query: 1058 TYTVEEYEVRILEPDRAGGPWQTRATIPMQSSENALTVRVVTL-FNTTTKENETLLAIGT 1116
++ ++ + D + + + + E + ++ ++L + T E + ++ +GT
Sbjct: 999 SFIKLVWDHHLQRQDSVILIFHLH-SFSLGADEYVMAIKNISLEVSENTHERKDMIVVGT 1057
Query: 1117 AYVQGEDVAARGRVLLFSTGRNADNPQN 1144
A+ +GED+ +RG + +F + +P +
Sbjct: 1058 AFARGEDIPSRGCIYVFEVVQVVPDPDH 1085
>sp|Q4WCL1|CFT1_ASPFU Protein cft1 OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293
/ CBS 101355 / FGSC A1100) GN=cft1 PE=3 SV=2
Length = 1401
Score = 136 bits (342), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 173/744 (23%), Positives = 307/744 (41%), Gaps = 114/744 (15%)
Query: 57 NLVVTAANVIEIY-VVRVQEEGSKESKNSGETKRRVLMDGISAASLELVCHYRLHGNVES 115
NLVV +V++I+ +++VQ E+ + + D + L L Y L G V
Sbjct: 28 NLVVVKTSVLQIFSLLKVQHHSRGETIETKSARP----DQVETTKLVLEREYPLSGTVVD 83
Query: 116 LA----ILSQGGADNSRRRDSIILAFEDAKISVLEFDDSIHGLRITSMHCFESPEWLHLK 171
+ + S+ G + +++LAF +AK+S++E+D HG+ S+H +E +
Sbjct: 84 ICRVKILNSKSGGE------ALLLAFRNAKLSLVEWDPERHGISTISIHYYERDDLTRSP 137
Query: 172 RGRESFARGPLVKVDPQGRCGGVLVYGLQ-MIILKASQGGSGLVGDEDTFG--------- 221
+ + G ++ VDP RC V +G++ + IL Q G L D+ F
Sbjct: 138 WVPDLSSCGSILSVDPSSRCA-VFNFGIRNLAILPFHQPGDDLAMDDYEFHLHQDDLNQV 196
Query: 222 ---SGGGFSAR--------IESSHVINLRDLD--MKHVKDFIFVHGYIEPVMVILHEREL 268
G G ++ SS V+ L LD + H F++ Y EP IL+ +
Sbjct: 197 SDHVGNGLKSKDSTVYQTPYASSFVLPLTALDPSILHPVSLAFLYEYREPTFGILYSQIA 256
Query: 269 TWAGRVSWKHHTCMISALSISTTLKQHPLIWSAMNLPHDAYKLLAVPSPIGGVLVVGANT 328
T +S + + + ++ + + S LP D +K++A+P P+GG L++G+N
Sbjct: 257 TSHALLSERKDSIFYTVFTLDLEQRASTTLLSVPKLPSDLFKVVALPPPVGGALLIGSNE 316
Query: 329 -IHYHSQSASCALALNNYAVSLDSSQELPRSSFSVELDAAHATWLQNDVA--LLSTKTGD 385
+H + A+ +N +A + + + +S ++ L+ + + LL +G+
Sbjct: 317 LVHVDQAGKTNAVGVNEFARQVSAFSMVDQSDLALRLEGCVVEHISDSTGDLLLVLSSGN 376
Query: 386 LVLLTVVYDGRVVQRLDL----SKTNPSVLTSDITT---IGNSLFFLGSRLGDSLLVQFT 438
+VL+ DGR V + L ++ +++ S ++ +G+ F GS DS+L+ ++
Sbjct: 377 MVLVHFQLDGRSVSGISLRPLPTQAGGTIMKSAASSSAFLGSGRVFFGSEDADSVLLSWS 436
Query: 439 CGSGTSMLSSGLKEEFGDIEADAPSTKRLRRSSSDALQ-DMVNGE-ELSLYGSASNNTES 496
+ ++ D +S DA + D+ E E G + +
Sbjct: 437 SMPN----PKKSRPRMSNVAEDREEASDDSQSEEDAYEDDLYTAEPETPALGRRPSAETT 492
Query: 497 AQKTFSFAVRDSLVNIGPLKDFSYGLRINADASATGISKQSNYELVELPGCKG------- 549
+ F D L NIGPL+D + G + + + K + EL EL +G
Sbjct: 493 GVGAYIFQTLDRLPNIGPLRDITLGKPASTVENTGRLIKNACSEL-ELVAAQGSGRNGGL 551
Query: 550 ----------------------IWTVYHKSSRGHN--ADSSRMAAYDDEYHAYLIISLEA 585
+WT G D ++ + EY Y+I+S +
Sbjct: 552 VLMKREIEPDVTASFDAQSVQEVWTAVVALGSGAPLVLDEQQI---NQEYRQYVILS-KP 607
Query: 586 RTMVLETADLLTEVTESVDYFVQGR-------TIAAGNLFGRRRVIQVFERGARILDGSY 638
T ET+++ T+ + F TI G L ++RV+QV R SY
Sbjct: 608 ETPDKETSEVFIADTQDLKPFRAPEFNPNNDVTIEIGTLSCKKRVVQVLRNEVR----SY 663
Query: 639 MTQDLSFG-----PSNSESGSGSENSTVLSVSIADPYVLLGMSDGSIRLLVGDPSTCTVS 693
D+ G P E S+ +S S+ADPY+ + D ++ +L D S
Sbjct: 664 ---DIDLGLAQIYPVWDE--DTSDERMAVSASLADPYIAILRDDSTLMILQADDSGDLDE 718
Query: 694 VQTPAAIESSKKPVSSCTLYHDKG 717
V+ A + K SC LY DK
Sbjct: 719 VELNEAARAGK--WRSCCLYWDKA 740
Score = 57.8 bits (138), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 54/235 (22%), Positives = 100/235 (42%), Gaps = 19/235 (8%)
Query: 914 ITIFKNISGHQGFFLSGSRPCWCMVFRERLRVHPQLCDGSIV---AFTVLHNVNCNHGFI 970
+ I NIS F+ G RP ++ + H G V + L + + + GFI
Sbjct: 884 LRILPNISNFSAVFMPG-RPASFILKTAKSCPHVFRLRGEFVRSLSIFDLASPSLDTGFI 942
Query: 971 YVTSQGILKICQLPSGSTYDNYWPVQKVIPLKATPHQITYFAEKNLYPLIVSVPVLKPLN 1030
YV S+ +L+IC+ PS + +D W ++K+ + H + Y Y L S +
Sbjct: 943 YVDSKDVLRICRFPSETLFDYTWALRKISIGEQVDH-LAYATSSETYVLGTS------HS 995
Query: 1031 QVLSLLIDQEVGHQIDNHNLSSVDLHRTYTVEEYEVRILEPDRAGGPWQTRATIPMQSSE 1090
L D E+ N L L + + ++++ P W + + E
Sbjct: 996 ADFKLPDDDELHPDWRNEGLVISFLPE---LRQCSLKVVSPRT----WTVIDSYSLGPDE 1048
Query: 1091 NALTVRVVTL-FNTTTKENETLLAIGTAYVQGEDVAARGRVLLFSTGRNADNPQN 1144
+ V+ + L + T E ++ +GTA+ +GED+ +RG + +F + +P+
Sbjct: 1049 YVMAVKNMDLEVSENTHERRNMIVVGTAFARGEDIPSRGCIYVFEVIKVVPDPEK 1103
>sp|Q0UUE2|CFT1_PHANO Protein CFT1 OS=Phaeosphaeria nodorum (strain SN15 / ATCC MYA-4574
/ FGSC 10173) GN=CFT1 PE=3 SV=1
Length = 1375
Score = 131 bits (330), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 167/727 (22%), Positives = 295/727 (40%), Gaps = 142/727 (19%)
Query: 57 NLVVTAANVIEIY-----VVRVQEEGSKESKNSG-----ETKRRVLMDGISAASLELVCH 106
NL+V ++++++ V V G E+ N+ E L + A L LV
Sbjct: 28 NLIVAKNSLLQVFELKSTVTEVASGGEGEADNAAANFDTEAADVPLQRIENTAKLVLVGE 87
Query: 107 YRLHGNVESLAILSQGGADNSRRRDSIILAFEDAKISVLEFDDSIHGLRITSMHCFESPE 166
+ L G V SLA + + R +++++AF DAK+S++E+D + L S+H +E+P+
Sbjct: 88 FPLAGTVISLARVK--ALNTKSRAEALLVAFRDAKLSLVEWDPETYNLHTISIHYYENPD 145
Query: 167 ------WLHLKRGRESFARGPLVKVDPQGRCGGVLVYGLQMIIL---------------- 204
W + +F + DP RC + + IL
Sbjct: 146 VPGLAPWDAELKDTYNF-----LTADPSSRCAALKFGTHNLAILPFRQRDLAEDEYDSDN 200
Query: 205 KASQGGSGLVGDEDTFGSGGGFSARI--ESSHVINLRDLD--MKHVKDFIFVHGYIEPVM 260
+A+Q G E G+ G + + SS V+ L +LD + H F+H Y EP
Sbjct: 201 EAAQEGKA----ERANGANGDDAVKTPYSSSFVLPLTNLDPTLTHPVHLAFLHEYREPTF 256
Query: 261 VILHERELTWAGRVSWKHHTCMISALSISTTLKQHPLIWSAMNLPHDAYKLLAVPSPIGG 320
++ + T A ++ + + ++ K + S LP+D +++ +P PIGG
Sbjct: 257 GVISSSKATAASLLTHRKDILTYTVFTLDLEQKASTTLLSVPGLPYDLTQVVPLPHPIGG 316
Query: 321 VLVVGAN-TIHYHSQSASCALALNNYAVSLDSSQELPRSSFSVELDAAHATWLQNDVA-- 377
L+VG+N IH + +A+N A + S ++ ++ L+ L D
Sbjct: 317 ALLVGSNEIIHVDQAGKTNGVAVNELAKACTSFALSDQADLALRLEGCTLELLSQDTGDV 376
Query: 378 LLSTKTGDLVLLTVVYDGRVVQRLDL----SKTNPSVLTSDI---TTIGNSLFFLGSRLG 430
++ G + +LT DGR V + + + ++L + T +G F+GS G
Sbjct: 377 MIVLNDGSIFILTFSLDGRNVSAMTIQPVPADNGGNILKTRASCSTNLGRGRLFIGSEDG 436
Query: 431 DSLLVQFTCGSGTSMLSSGLKEEFGDIEADAPSTKRLRRSSSDALQDMVNGEELSLYGSA 490
+S+L+ +T ++ +LRR S+ Q + E++S
Sbjct: 437 ESVLMGWTS-----------------------TSNQLRRKQSNTAQSG-DDEDMSDVEEE 472
Query: 491 S---------NNTESAQK-------------TFSFAVRDSLVNIGPLKD----------- 517
N+T + K T++F V D L +I P++D
Sbjct: 473 EVDDLDDDLYNDTATTVKKITAAAAEPTAPGTYTFRVHDVLPSIAPIRDTVLHPGKDTES 532
Query: 518 FSYG-LRINADASATGISKQSNYEL-------VELPGCKGIWTVYHKSSR--------GH 561
+ G + ++ A G N EL ELP G+W V+ K G
Sbjct: 533 LTKGEIMLSTGRGAAGAITALNRELHPTMLAQTELPSSNGVWAVHAKKQAPAGIVADFGQ 592
Query: 562 NADSSRMAAYDDEYHAYLIISLE-----ARTMVLETADLLTEVTESVDYFV-QGRTIAAG 615
+A+++ A+ D +Y YL++S T+V E TE D+ +G T++ G
Sbjct: 593 DAEAN--ASSDVDYDQYLVVSKAWEDGTESTVVYEVHGNELSETEKGDFERDEGLTLSVG 650
Query: 616 NLFGRRRVIQVFERGARILDGSYMTQDLSFGPSNSESGSGSENSTVLSVSIADPYVLLGM 675
L +V+QV R D + + P E N +++ S ADPY+L+
Sbjct: 651 VLARGTKVVQVLRSEVRTYDSELGMEQII--PMEDEETGNELN--IINASFADPYLLIQR 706
Query: 676 SDGSIRL 682
D S+++
Sbjct: 707 EDSSVKI 713
Score = 61.6 bits (148), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 61/269 (22%), Positives = 103/269 (38%), Gaps = 25/269 (9%)
Query: 870 PVSTSRSLSVSNVSASRLRNLRFSRTPLDAYTREETPHGAPCQRITIFKNISGHQGFFLS 929
P +S L N+ +L R D E + NI+G+
Sbjct: 836 PSRSSSDLWTHNLRWVKLSQQHVPRYMEDGAQEEAADEPGFESTLLALDNINGYSTVIQR 895
Query: 930 GSRPCWCMVFRERLRVHPQLCDGSIVAFTVLHNVNCNHGFIYVTSQGILKICQLPSGSTY 989
G P + + L + + T H +C GF Y+ S L+I QLP + Y
Sbjct: 896 GRSPAFILKESSSAPRVIGLSGNPVKSLTRFHTSSCQRGFAYLDSTDTLRISQLPPSTHY 955
Query: 990 DNYWPVQKVIPLKATPHQITYFAEKNLYPLIVSVP---VLKPLNQVLSLLIDQEVGHQID 1046
+ + +P+ A H + Y LY + P L P + L +E +
Sbjct: 956 GHLGWAARRMPMDAEVHALAYHP-SGLYVIGTGQPEEYTLDPNDTFHYELPKEETSFKPK 1014
Query: 1047 -NHNLSSVDLHRTYTVEEYEVRILEPDRAGGPWQTRATIPMQSSENALTVRVVTL-FNTT 1104
H + V +T+TV + +L+P E L ++ + L + T
Sbjct: 1015 VEHGIIKVMDEKTWTV--IDTHVLDP-----------------QEVILCIKTLNLEVSET 1055
Query: 1105 TKENETLLAIGTAYVQGEDVAARGRVLLF 1133
T + + ++A+GTA V GED+A +G + +F
Sbjct: 1056 THQRKDVIAVGTAIVLGEDLATKGNIRIF 1084
>sp|A1DB13|CFT1_NEOFI Protein cft1 OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 /
FGSC A1164 / NRRL 181) GN=cft1 PE=3 SV=1
Length = 1400
Score = 131 bits (330), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 179/747 (23%), Positives = 309/747 (41%), Gaps = 119/747 (15%)
Query: 57 NLVVTAANVIEIY-VVRVQEE---GSKESKNSGETKRRVLMDGISAASLELVCHYRLHGN 112
NLVV +V++I+ +++VQ G+ E K++ D + L L Y L G
Sbjct: 28 NLVVVKTSVLQIFSLLKVQHHLRGGTIEGKSARP-------DRVETTKLVLEREYPLSGT 80
Query: 113 VESLA---ILS--QGGADNSRRRDSIILAFEDAKISVLEFDDSIHGLRITSMHCFESPEW 167
V + IL+ GG ++++LAF +AK+S++E+D HG+ S+H +E +
Sbjct: 81 VVDICRVKILNPKSGG-------EALLLAFRNAKLSLVEWDPERHGISTLSIHYYERDDL 133
Query: 168 LHLKRGRESFARGPLVKVDPQGRCGGVLVYGLQ-MIILKASQGGSGLVGD-------EDT 219
+ + G ++ VDP RC V +G++ + IL Q G L D +D
Sbjct: 134 TRSPWVPDLSSCGSILSVDPSSRCA-VFNFGIRNLAILPFHQPGDDLAMDDYEFHLHQDD 192
Query: 220 FGS-----GGGFSAR--------IESSHVINLRDLD--MKHVKDFIFVHGYIEPVMVILH 264
F G ++ SS V+ L LD + H F++ Y EP +L+
Sbjct: 193 FNQVSDHVGNDLKSKDRTVYQTPYASSFVLPLTALDPSILHPVSLAFLYEYREPTFGVLY 252
Query: 265 ERELTWAGRVSWKHHTCMISALSISTTLKQHPLIWSAMNLPHDAYKLLAVPSPIGGVLVV 324
+ T + + + + ++ + + S LP D +K++A+P P+GG L++
Sbjct: 253 SQIATSHALLPERKDSIFYTVFTLDLEQRASTTLLSVPKLPSDLFKVVALPPPVGGALLI 312
Query: 325 GANT-IHYHSQSASCALALNNYAVSLDSSQELPRSSFSVELDAAHATWLQNDVA--LLST 381
G+N +H + A+ +N +A + + + +S ++ L+ L + LL
Sbjct: 313 GSNELVHVDQAGKTNAVGVNEFARQVSAFSMVDQSDLALRLEGCVVEHLSDSTGDLLLVL 372
Query: 382 KTGDLVLLTVVYDGRVVQRLDL----SKTNPSVLTSDITT---IGNSLFFLGSRLGDSLL 434
+G++VL+ DGR V + L ++ +++ S ++ +G+ F GS DS+L
Sbjct: 373 SSGNMVLVHFQLDGRSVSGISLRPLPAQAGGTIMKSAASSSAFLGSGRVFFGSEDADSVL 432
Query: 435 VQFTCGSGTSMLSSGLKEEFGDIEADAPSTKRLRRSSSDALQ-DMVNGE-ELSLYGSASN 492
+ ++ S + ++ D +S D + D+ E E G +
Sbjct: 433 LSWSSMSSN---PKKPRPRMSNVAEDREEASVDSQSEEDVYEDDLYTAEPETPALGRRPS 489
Query: 493 NTESAQKTFSFAVRDSLVNIGPLKDFSYG-----------LRINADASATGISKQS---N 538
S + F + D L NIGPL+D + G L NA + I+ Q N
Sbjct: 490 AETSGVGVYIFQILDRLPNIGPLRDITLGKPASTVENTGRLIENACSELELIAAQGSGRN 549
Query: 539 YELV--------------ELPGCKGIWTVYHKSSRGHN--ADSSRMAAYDDEYHAYLIIS 582
LV + +G+WT G D R+ + EY Y+I+S
Sbjct: 550 GGLVLMKREIEPDVAASFDAQSVQGVWTAVVALGSGAPLVPDEQRI---NQEYRQYVILS 606
Query: 583 LEARTMVLETADLLTEVTESVDYFVQGR-------TIAAGNLFGRRRVIQVFERGARILD 635
+ E +++ + + F TI G L +RRV+QV R
Sbjct: 607 -KPEAPDKEQSEVFIADKQDLKPFKAPEFNPNNDVTIEIGTLSCKRRVVQVLRNEVR--- 662
Query: 636 GSYMTQDLSFG-----PSNSESGSGSENSTVLSVSIADPYVLLGMSDGSIRLLVGDPSTC 690
SY D+ G P E S+ +S S+ADPY+ + D ++ LL D S
Sbjct: 663 -SY---DIDLGLAQIYPVWDE--DTSDERMAVSASLADPYIAILRDDSTLMLLQADDSGD 716
Query: 691 TVSVQTPAAIESSKKPVSSCTLYHDKG 717
V+ + + K SC LY DK
Sbjct: 717 LDEVELDDSTRAGK--WRSCCLYWDKA 741
Score = 55.5 bits (132), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/236 (21%), Positives = 99/236 (41%), Gaps = 23/236 (9%)
Query: 914 ITIFKNISGHQGFFLSGSRPCWCMVFRER----LRVHPQLCDGSIVAFTVLHNVNCNHGF 969
+ I NIS F+ G + + + R+ + G ++ L + + + GF
Sbjct: 885 LRILPNISDLSAVFMPGPSASFILKTAKSCPHVFRLRGEFVRG--LSIFDLASPSLDKGF 942
Query: 970 IYVTSQGILKICQLPSGSTYDNYWPVQKVIPLKATPHQITYFAEKNLYPLIVSVPVLKPL 1029
IYV S+ +L+IC+ PS + +D W ++K+ + H + Y Y L S
Sbjct: 943 IYVDSKDVLRICRFPSETLFDYTWALRKIGIGEQVDH-LAYATSSETYVLGTS------H 995
Query: 1030 NQVLSLLIDQEVGHQIDNHNLSSVDLHRTYTVEEYEVRILEPDRAGGPWQTRATIPMQSS 1089
+ L D E+ N +S + R +++ R W + + +
Sbjct: 996 SADFKLPDDDELHPDWRNEVISFLPELRQCSLKVVSPRT---------WTVIDSYSLGPA 1046
Query: 1090 ENALTVRVVTL-FNTTTKENETLLAIGTAYVQGEDVAARGRVLLFSTGRNADNPQN 1144
E + V+ + L + T E ++ +GTA+ GED+ +RG + +F + +P+
Sbjct: 1047 EYVMAVKNMDLEVSENTHERRNMIVVGTAFAWGEDIPSRGCIYVFEVIKVVPDPEK 1102
>sp|Q6C740|CFT1_YARLI Protein CFT1 OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=CFT1
PE=3 SV=1
Length = 1269
Score = 124 bits (311), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 235/1074 (21%), Positives = 412/1074 (38%), Gaps = 184/1074 (17%)
Query: 98 AASLELVCHYRLHGNVESLAILSQGGADNSRRRDSIILAFEDAKISVLEFDDSIHGLRIT 157
A LEL+ Y L G V + + DN DS+ ++ + AK ++ ++ S +
Sbjct: 51 APRLELITEYYLDGTVTGVTRIKT--IDN-YDLDSLYISVKHAKAVIVAWNASSFTIDTK 107
Query: 158 SMHCFESPEWLHLKRGRESFARGPLVKVDPQGRCGGVLVYGLQMIILKASQGGSGLVGDE 217
S+H +E + L E V + +L +M L + G + D+
Sbjct: 108 SLHYYE--KGLVESNFFEPECSSVAVSDEANSFYTCLLFQNDRMAFLPIIEKG---LDDD 162
Query: 218 DTFGSGGGFSARIESSHVINLRDLD--MKHVKDFIFVHGYIEPVMVILHERELTWAGRVS 275
+ SG F + S ++ LD +++V D F+H Y E M IL + + W G +
Sbjct: 163 EMPESGQVF----DPSFIVKASRLDKRIENVMDICFLHEYRETTMGILFQPKRAWVGMKN 218
Query: 276 WKHHTCMISALSISTTLKQHPLIWSAMNLPHDAYKLLAVPSPIGGVLVVGANTIHYHSQS 335
T + +S+ K +I + LP DA K++ +P+P+GG L++ ANTI Y S
Sbjct: 219 ILKDTVSYAIVSVDVHQKNSTVIGTLNGLPVDAQKVIPLPAPLGGSLIICANTILYIDSS 278
Query: 336 ASCALALNNYAVSLDSSQELPR--SSFSVELDAAHATWLQN--DVALLSTKTGDLVLLTV 391
AS + N +S + R S+ + L+ A ++Q + ALL T+ G L
Sbjct: 279 ASYTGVMVNNTHRQNSDLIVSRDQSTLDLRLEGAEVCFIQELGNTALLVTEDGQFFSLLF 338
Query: 392 VYDGRVVQRLDLSKTNPS--VLT--SDITTIGNSLFFLGSRLGDSLLVQFTCGSGTSMLS 447
DGR V L+L P +L+ S + + FLGSR GDSLLV++ G S
Sbjct: 339 NKDGRRVASLELRPIEPDNFILSQPSSVAAGPDGTIFLGSRAGDSLLVKWYHGEPESQPE 398
Query: 448 SGLKEEFGDIEADAPSTKRLRRSSSDALQDMVNGEELSLYGSASNNTE-SAQKTFSFAVR 506
L D N + LYG + TE + + +
Sbjct: 399 ETL--------------------------DDGNESDDDLYGGDTAQTEDTTNRPLKLRLA 432
Query: 507 DSLVNIGPLKDFSYGLRINADA----SATGISKQSNYELV--------------ELPGCK 548
D ++ +GP++ + G + + TG+ S ++ ++PG +
Sbjct: 433 DRMLGMGPMQSLALGKNRGSQGVEFVTTTGVGANSALAILTSALMPYKRKSLYKDMPGGQ 492
Query: 549 GIWTVYHK-SSRGHNADSSRMAAYDDEYHAYLIISLEARTMVLETADLLTEVTESVDYFV 607
W+V + G A S D ++YL A V+E L T+ ++ +FV
Sbjct: 493 -FWSVPVRFEEEGEVAKSRTYVVSSDSENSYLYYVDAAG--VIEDVSLSTKKKKTKKHFV 549
Query: 608 QGRTIAAGNLFGRRRVIQVFERGARILDGSYMTQDLSFGPSNSESGSGSENSTVLSVSIA 667
T + ++QV I D S + +T + +
Sbjct: 550 SNVTTIFSSSMLDSALLQVCLETVNIYDAKI---------GQPHKYSLPQGTTAVEARVL 600
Query: 668 DPYVLLGMSDGSIRLLVGDPSTCTVSVQTPAAIESSKKPVSSCTLYHDKGPEPWLRKTST 727
YVL+ +SDG +++L VS+ +++++ + + G +T
Sbjct: 601 GNYVLVLLSDGQVKILEA------VSINKRPFLKAAQVSIEPASESKAIG------IYAT 648
Query: 728 DAWLSTGVGEAIDGADGGPLDQGDIYSVVCYESGALEIFDVPNFNCVFTVDKFVSGRTHI 787
D+ L+ G G P VVCY G+L + S I
Sbjct: 649 DSSLTFGAPSKKRTRQGSPAQDSRPVVVVCYADGSL------------LLQGLNSDDRLI 696
Query: 788 VDTYMREALKDSETEINSSSEEGTGQGRKENIHSMKVVELAMQRWSAHHSRPFLFAILTD 847
+D ++++ +E GQ +++V++A+ H +LT
Sbjct: 697 LDA----------SDLSGFIKEKDGQLYDA---PLELVDIALSPLGDDHILRDYLVLLTP 743
Query: 848 GTILCYQAYLFEGPENTSKSDDPVSTSRSLSVSNVSASRLRNLRFSRTPLDAYTREETPH 907
++ Y+ Y + LRF + L E TP
Sbjct: 744 QQLVVYEPYHYND----------------------------KLRFRKIFL-----ERTPT 770
Query: 908 GAPCQRITIFKNISGHQGFFLSGSRPCWCMVFRERLRVHPQLCD----GSIVAFTVLHNV 963
+R+T I+G ++G + + L P+L + VAFT
Sbjct: 771 INSDRRLTQVPLINGKHTLGVTGET---AYILVKTLHTSPRLIEFGETKGAVAFT----- 822
Query: 964 NCNHGFIYVTSQGILKICQLPSGSTYDNYWPVQKVIPLKATPHQITYFAEKNLYPLIVSV 1023
+ + F Y+T G + C+ + + WPV+ V T ++TY ++Y
Sbjct: 823 SWDGKFAYLTQAGEVAECRFDPSFSLETNWPVKHVQLCGETISKVTYHETMDVY------ 876
Query: 1024 PVLKPLNQVLSLLIDQEVGHQIDNHNLSSV--DLHRTYTVEEYEVRILEPDRAGGPWQTR 1081
V+ V ++ D+ D+ + S+ D+ T + +RI+ P W
Sbjct: 877 -VIATHKTVPHVVRDE------DDEVIESLTPDIMPATTYQG-AIRIVNP----YSWTVI 924
Query: 1082 ATIPMQ-SSENALTVRVVTLFNTTTK-ENETLLAIGTAYVQGEDVAARGRVLLF 1133
+ + +E AL V L + K + ++A+GT+ ++GED+AARG + LF
Sbjct: 925 DSYEFEMPAEAALCCESVKLSISDRKSQKREVVAVGTSILRGEDLAARGALYLF 978
>sp|A1C3U1|CFT1_ASPCL Protein cft1 OS=Aspergillus clavatus (strain ATCC 1007 / CBS 513.65
/ DSM 816 / NCTC 3887 / NRRL 1) GN=cft1 PE=3 SV=1
Length = 1401
Score = 119 bits (297), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 167/723 (23%), Positives = 294/723 (40%), Gaps = 127/723 (17%)
Query: 57 NLVVTAANVIEIYV---VRVQEEGSKESKNSGETKRRVLMDGISAASLELVCHYRLHGNV 113
NLVV +V++I+ V EG + S D + + L L Y L G V
Sbjct: 28 NLVVVKTSVLQIFSLLNVSCSAEGEIIAAKSARP------DQLQSTKLILEREYSLSGTV 81
Query: 114 ESLA----ILSQGGADNSRRRDSIILAFEDAKISVLEFDDSIHGLRITSMHCFESPEWLH 169
L + ++ G D +I+LAF +AK+S++E+D +G+ S+H +E +
Sbjct: 82 SDLCRVKLLKTKSGGD------AILLAFRNAKLSLVEWDPERYGISTISIHYYERDDITR 135
Query: 170 LKRGRESFARGPLVKVDPQGRCGGVLVYGLQ-MIILKASQGGSGLV-GD----------- 216
+ + G ++ VDP RC V +G++ + IL Q G LV GD
Sbjct: 136 SPWVPDLSSCGSILSVDPSSRCA-VFNFGIRNLAILPFHQPGDDLVMGDYESDSQKQSHE 194
Query: 217 ---EDTFGS-----GGGFSARIESSHVINLRDLD--MKHVKDFIFVHGYIEPVMVILHER 266
+D+ G+ G SS V+ L LD + H F++ Y EP IL+ +
Sbjct: 195 HEMDDSAGNSKSKEGAVHQTPYASSFVLPLTALDSAILHPVSLAFLYEYREPTFGILYSQ 254
Query: 267 ELTWAGRVSWKHHTCMISALSISTTLKQHPLIWSAMNLPHDAYKLLAVPSPIGGVLVVGA 326
T + + + ++ + ++ S LP D +K++A+P P+GG L++G
Sbjct: 255 IATSNSLLHERKDAIFYTVFTLDLEQRASTMLLSVTRLPSDLFKVVALPPPVGGALLIGY 314
Query: 327 NT-IHYHSQSASCALALNNYAVSLDSSQELPRSSFSVELDAAHATWLQNDVA--LLSTKT 383
N +H + A+ +N ++ + + +S ++ L+ L N LL+ +
Sbjct: 315 NELVHVDQAGKTNAVGVNEFSRQVSTFSMADQSELALRLEGCVVELLGNSSGDLLLALSS 374
Query: 384 GDLVLLTVVYDGRVVQRLDLSKTNPSVLTSDI--------TTIGNSLFFLGSRLGDSLLV 435
G +VL+ DGR V + + + P +I ++G+ F GS +S+L+
Sbjct: 375 GTMVLVHFKLDGRSVSGISI-RPLPGHAGGNILKAAASASASLGSDKVFFGSEDAESVLL 433
Query: 436 QFTCGSGTSMLSSGLKEEFGDIEADAPSTKRLRRSSSDALQDMVNGEELSLYGSASNN-- 493
++ S + S + E IE D S D +D LY +A +
Sbjct: 434 GWSLSSSNARKS---RSESKRIEKDHEEGSDDSESEEDVYED-------DLYSAAPDTPA 483
Query: 494 -------TESAQKTFSFAVRDSLVNIGPLKDFSYG-------------------LRINAD 527
S ++ F V D L N PL+D + G L + A
Sbjct: 484 LGHRLSVAPSTFASYKFKVHDVLPNTAPLRDIALGQPAMPVEDTGSHLDNICSELELVAA 543
Query: 528 ASATG-----ISKQSNYELVE----LPGCKGIWT---VYHKSSRGHNADSSRMAAYDDEY 575
+ G + K+ +V+ + G+WT +++ + D + + +E+
Sbjct: 544 YGSNGNGGLVVMKRELEPVVKASLNVGPIHGVWTASIALGSAAKPMSGDQTNI----EEW 599
Query: 576 HAYLIISLEARTMVLETADLLTEVTESVDYFVQGR-------TIAAGNLFGRRRVIQVFE 628
Y+I++ + +T+ E +++ ++ F +I G L R+RV+QV
Sbjct: 600 RQYVILT-KPQTIDKEESEVFIVDGLNLKPFKAPEFNPNNDISIQVGTLSNRKRVVQVLR 658
Query: 629 RGARILDGSYMTQDLSFG---PSNSESGSGSENSTVLSVSIADPYVLLGMSDGSIRLLVG 685
R D DL P E S+ LS S+ADPY+ + D ++ LL
Sbjct: 659 NEVRSYD-----SDLELAQIYPVWDE--DTSDERMALSASLADPYIAILRDDSTLLLLQA 711
Query: 686 DPS 688
D S
Sbjct: 712 DDS 714
Score = 64.7 bits (156), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 111/266 (41%), Gaps = 33/266 (12%)
Query: 889 NLRFSRTPLDAYTREETPHGAPCQRITIFKNISGHQGFFLSG---------SRPCWCMVF 939
N R P D+ T + + + I +ISG+ F+ G SR C +
Sbjct: 861 NHVLPRIPPDSDTNISDKEPSNHRPLCILPDISGYSAVFMPGTSASFIFKTSRSC-PHIL 919
Query: 940 RERLRVHPQLCDGSIVAFTVLHNVNCNHGFIYVTSQGILKICQLPSGSTYDNYWPVQKVI 999
R R V L D FT + + GFIYV S+ +++ICQLP + YD W ++KV
Sbjct: 920 RLRGGVVRSLSD---FDFT---DPSLGRGFIYVDSKDVVRICQLPPETIYDYSWTLKKVA 973
Query: 1000 PLKATPHQITYFAEKNLYPLIVSVPVLKPLNQVLSLLIDQEVGHQIDNHNLSSVDLHRTY 1059
+ H + Y Y L S + L D E+ + N +S + R
Sbjct: 974 IGEHVDH-LAYSISSETYVLGTS------HSADFKLPEDDELHPEWRNEAISFLPELRQC 1026
Query: 1060 TVEEYEVRILEPDRAGGPWQTRATIPMQSSENALTVRVVTL-FNTTTKENETLLAIGTAY 1118
++++ P W + + E + V+ + L + T E + ++ +GTA
Sbjct: 1027 C-----LKVVHPKT----WTVIDSYTLGPDEEIMAVKNMNLEVSENTHERKNMIVVGTAL 1077
Query: 1119 VQGEDVAARGRVLLFSTGRNADNPQN 1144
+GED+ ARG + +F + +P+
Sbjct: 1078 ARGEDIPARGCIYVFEVIKVVPDPEK 1103
>sp|Q1E5B0|CFT1_COCIM Protein CFT1 OS=Coccidioides immitis (strain RS) GN=CFT1 PE=3 SV=1
Length = 1387
Score = 113 bits (283), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 172/731 (23%), Positives = 294/731 (40%), Gaps = 94/731 (12%)
Query: 57 NLVVTAANVIEIYVVRVQEEGSKESKNSGETKRRVLMDGISAASLELVCHYRLHGNVESL 116
NL+V ++++++ + G+ N+ + R ++ L LV Y L G + L
Sbjct: 28 NLIVAKTSILQVFSLVNVAYGTSAPPNADDKGR---VERQQYTKLILVAEYDLSGTITGL 84
Query: 117 AILSQGGADNSRRRDSIILAFEDAKISVLEFDDSIHGLRITSMHCFESPEWLHLKRGRES 176
+ D+ ++++++ +AK+S++E+D HG+ S+H +E E +H
Sbjct: 85 GRVKI--LDSRSGGEALLVSTRNAKLSLVEWDHERHGISTISIHYYER-EDVHSSPWTPD 141
Query: 177 FARGP-LVKVDPQGRCGGVLVYGLQMI-ILKASQGGSGLVGDE-----DTFGSGGG---- 225
P L+ VDP RC +L +G+ + IL Q G LV DE D G
Sbjct: 142 LRLCPSLLAVDPSSRCA-ILNFGIHSVAILPFHQTGDDLVMDEFDEDLDEKPEGASNIPA 200
Query: 226 ----------FSARIESSHVINLRDLD--MKHVKDFIFVHGYIEPVMVILHERELTWAGR 273
+ SS V+ L LD + H F++ Y EP IL+ T +
Sbjct: 201 QAAVANDTTMYKTPYASSFVLPLTALDPALVHPIHLAFLYEYREPTFGILYSHLTTSSAL 260
Query: 274 VSWKHHTCMISALSISTTLKQHPLIWSAMNLPHDAYKLLAVPSPIGGVLVVGANT-IHYH 332
+ + + ++ + + + LP D +K++ +P PIGG L++G+N IH
Sbjct: 261 LHDRKDIVSYAVFTLDIQQRASTTLITVSRLPSDLWKVVPLPPPIGGALLIGSNELIHVD 320
Query: 333 SQSASCALALNNYAVSLDSSQELPRSSFSVELDAAHATWLQNDVA--LLSTKTGDLVLLT 390
+ A+ +N +A + + +S + L+ L D LL G + +L
Sbjct: 321 QAGKTNAVGINEFARQASAFSMVDQSDLGLRLEGCVVEQLGTDSGDILLVLADGKMAILR 380
Query: 391 VVYDGRVVQ----RLDLSKTNPSVLTSDIT---TIGNSLFFLGSRLGDSLLVQFTCGSGT 443
+ DGR V +L K S+L + + ++G F GS DSLL+ ++ S
Sbjct: 381 LKVDGRSVSGISAQLVSEKAGGSILKARPSCSASLGRGKVFFGSEETDSLLIGWSRPS-Q 439
Query: 444 SMLSSGLK---EEFGDIEADAPSTKRLRRSSSDALQDMVNGEELSLYGSASNNTESAQKT 500
SM ++ + FG + D VN LS S +N +
Sbjct: 440 SMRKPKVESADDVFG--DHSETEDDEDDIYEDDLYSTPVNQTTLSKTTSQTNGLN--KDD 495
Query: 501 FSFAVRDSLVNIGPLKDFSYGL--------------RINADASATGISKQSN-------- 538
F F D L N+GP+ D + G R +AD + N
Sbjct: 496 FVFRSHDRLWNLGPMSDVTLGRPPGSHDKNRKQSSSRTSADLELVVTQGKGNAGGLAVLQ 555
Query: 539 -------YELVELPGCKGIWTVYHKSSRGHNADSSRMAAYDDEYHAYLIISL-----EAR 586
+ +++ G+W++ + DS+ Y YL+ S + +
Sbjct: 556 RELDPYVIDSMKMDNVDGVWSIQVGA-----PDSTNTRTSSRNYDKYLVFSKSTEPGKEQ 610
Query: 587 TMVLETADLLTEVTESVDYFV-QGRTIAAGNLFGRRRVIQVFERGARILDGSYMTQDLSF 645
++V E ++ ++ + T+ G L G RV+QV + R D + +
Sbjct: 611 SVVYSVGGSGIEEMKAPEFNPNEDSTVDIGTLAGGTRVVQVLKSEVRSYDTNLELAQIY- 669
Query: 646 GPSNSESGSGSENSTVLSVSIADPYVLLGMSDGSIRLLVGDPSTCTVSVQTPAAIESSKK 705
P E S+ +V+S S A+PYVL+ D S+ LL D S V I SS +
Sbjct: 670 -PIWDE--DTSDELSVVSASFAEPYVLIVRDDQSLLLLQADKSGDLDEVNI-DGILSSHR 725
Query: 706 PVSSCTLYHDK 716
+S C LY DK
Sbjct: 726 WLSGC-LYLDK 735
Score = 79.7 bits (195), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/253 (24%), Positives = 116/253 (45%), Gaps = 25/253 (9%)
Query: 891 RFSRTPLDAYTREETPHGAPCQRITIFKNISGHQGFFLSGSRPCWCMVFRERLRVHPQLC 950
RF +P AY PH + + + +I G++ F+SGS PC+ M +L
Sbjct: 860 RFDPSP-KAYM----PHS---KFLRAYSDICGYKTVFMSGSNPCFVMKSSTSSPHVLRLR 911
Query: 951 DGSIVAFTVLHNVNCNHGFIYVTSQGILKICQLPSGSTYDNYWPVQKVIPLKATPHQITY 1010
++ + + H C GF YV + ++++C+LPS + +DN W +KV + + Y
Sbjct: 912 GEAVSSLSSFHIPACEKGFAYVDASNMVRMCRLPSNTRFDNSWVTRKV-HVGDQIDCVEY 970
Query: 1011 FAEKNLYPLIVSVPVLKPLNQVLSLLIDQEVGHQIDNHNLSSVDLHRTYTVEEYEVRILE 1070
FA +Y L S V L + D E+ + + +S + +E +++L
Sbjct: 971 FAHSEIYALGSSHKVDFKLPE------DDEIHPEWRSEVISFMP-----QLERGCIKLLS 1019
Query: 1071 PDRAGGPWQTRATIPMQSSENALTVRVVTL-FNTTTKENETLLAIGTAYVQGEDVAARGR 1129
P W + + +E + ++ + + + T E + +L +GTA V+GED+ RG
Sbjct: 1020 PRT----WSVVDSYELGDAERVMCMKTINMEISEITHEMKDMLVVGTATVRGEDITPRGS 1075
Query: 1130 VLLFSTGRNADNP 1142
+ +F A +P
Sbjct: 1076 IYVFEIIEVAPDP 1088
>sp|P0CM62|CFT1_CRYNJ Protein CFT1 OS=Cryptococcus neoformans var. neoformans serotype D
(strain JEC21 / ATCC MYA-565) GN=CFT1 PE=3 SV=1
Length = 1431
Score = 111 bits (278), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 159/715 (22%), Positives = 296/715 (41%), Gaps = 106/715 (14%)
Query: 57 NLVVTAANVIEIYVVRVQE----EGSKESKNSGETKRRVLMDGI---------------- 96
NLVV A V+ ++ +R + E K ++ E ++ V M+ +
Sbjct: 48 NLVVAGAEVLRVFEIREESVPIIENVKLEEDVAEGEKDVQMEEVGDGFFDDGHAERAPLK 107
Query: 97 --SAASLELVCHYRLHGNVESLAILSQGGADNSRRRDSIILAFEDAKISVLEFDDSIHGL 154
+ L L+ + L+G + LA ++ D +I++F+DAK+++LE+ S +
Sbjct: 108 YQTTRRLHLLTQHELNGTITGLAA-TRTLESTIDGLDRLIVSFKDAKMALLEW--SRGDI 164
Query: 155 RITSMHCFESPEWLHLKRGRESFARGPLVKVDPQGRCGGVLVYGLQMIILKASQGGSGLV 214
S+H +E ++ +S+ PL++ DP R + + + +L Q S L
Sbjct: 165 ATVSLHTYERCSQMNTG-DLQSYV--PLLRTDPLSRLAVLTLPEDSLAVLPLIQEQSEL- 220
Query: 215 GDEDTFGSGGGFSARIESSHVINLRDLDM--KHVKDFIFVHGYIEPVMVILHERELTWAG 272
D G A S V++L D+ + K+++D +F+ G+ P + +L TW+G
Sbjct: 221 ---DPLSEGFSRDAPYSPSFVLSLSDMSITIKNIQDLLFLPGFHSPTIALLFSPMHTWSG 277
Query: 273 RV-SWKHHTCM-ISALSISTTLKQHPLIWSAMNLPHDAYKLLAVPSPIGGVLVVGANTIH 330
R+ + K C+ I +S+ +PL+ S LP D+ L+A PS +GG+++V + I
Sbjct: 278 RLQTVKDTFCLEIRTFDLSSG-TSYPLLTSVSGLPSDSLYLVACPSELGGIVLVTSTGIV 336
Query: 331 YHSQ----SASCALALNNYAVSLDSSQELPRSSFSVELDAAHATWLQNDVALLSTKTGDL 386
+ Q +A+C A + SL S + S + L+ + ++ LL + G +
Sbjct: 337 HVDQGGRVTAACVNAWWSRITSLKCS--MASVSQKLTLEGSRCVFVTPHDMLLVLQNGAV 394
Query: 387 VLLTVVYDGR---VVQRLDLSKTNPSVLTSDITTIGNSLFFLGSRLGDSLLVQFTCGSGT 443
+ +GR V++ LD P SD+T G+ F+GS GDS L +
Sbjct: 395 HQVRFSMEGRAVGVIEVLDKGCVVPP--PSDLTVAGDGAVFVGSAEGDSWLAKVNVVRQV 452
Query: 444 SMLSSGLKEEFGDIEADAPSTKRLRRSSSDALQDMVNGEELSLYGSASNNTESAQKTFSF 503
S K+E +++ D + L +DA D E L+G A+ +
Sbjct: 453 VERSEKKKDEM-EVDWD----EDLYGDINDAALDEKAQE---LFGPAA---------ITL 495
Query: 504 AVRDSLVNIGPLKDFSYGL-----------------------RINADASATGISKQSNYE 540
+ D L +G + D +G+ IN I+K+ +
Sbjct: 496 SPYDILTGVGKIMDIEFGIAASDQGLRTYPQLVAVSGGSRNSTINVFRRGIPITKRRRFN 555
Query: 541 LVELPGCKGIWTVYHKSSRGHNADSSRMAAYDDEYHAYLIISLEARTMVLETADLLTEVT 600
EL +G+W + G + + A +++S E L ++ T
Sbjct: 556 --ELLNAEGVWFLPIDRQTGQ-----KFKDIPEAERATILLSSEGNAT--RVFALFSKPT 606
Query: 601 ESVDYFVQGRTIAAGNLFGRRRVIQVFERGARILDGSYMTQDLSFGPSNSESGSGSENST 660
+ G+T++A F R +++V +LD + G +
Sbjct: 607 PQQIGRLDGKTLSAAPFFQRSCILRVSPLEVVLLDNN--------GKIIQTVCPRGDGPK 658
Query: 661 VLSVSIADPYVLLGMSDGSIRLLVGDPSTCTVSVQTPAAIESSKKPVSSCTLYHD 715
+++ SI+DP+V++ +D S+ VGD TV+ + P E + ++ D
Sbjct: 659 IVNASISDPFVIIRRADDSVTFFVGDTVARTVA-EAPIVSEGESPVCQAVEVFTD 712
>sp|P0CM63|CFT1_CRYNB Protein CFT1 OS=Cryptococcus neoformans var. neoformans serotype D
(strain B-3501A) GN=CFT1 PE=3 SV=1
Length = 1431
Score = 111 bits (278), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 159/715 (22%), Positives = 296/715 (41%), Gaps = 106/715 (14%)
Query: 57 NLVVTAANVIEIYVVRVQE----EGSKESKNSGETKRRVLMDGI---------------- 96
NLVV A V+ ++ +R + E K ++ E ++ V M+ +
Sbjct: 48 NLVVAGAEVLRVFEIREESVPIIENVKLEEDVAEGEKDVQMEEVGDGFFDDGHAERAPLK 107
Query: 97 --SAASLELVCHYRLHGNVESLAILSQGGADNSRRRDSIILAFEDAKISVLEFDDSIHGL 154
+ L L+ + L+G + LA ++ D +I++F+DAK+++LE+ S +
Sbjct: 108 YQTTRRLHLLTQHELNGTITGLAA-TRTLESTIDGLDRLIVSFKDAKMALLEW--SRGDI 164
Query: 155 RITSMHCFESPEWLHLKRGRESFARGPLVKVDPQGRCGGVLVYGLQMIILKASQGGSGLV 214
S+H +E ++ +S+ PL++ DP R + + + +L Q S L
Sbjct: 165 ATVSLHTYERCSQMNTG-DLQSYV--PLLRTDPLSRLAVLTLPEDSLAVLPLIQEQSEL- 220
Query: 215 GDEDTFGSGGGFSARIESSHVINLRDLDM--KHVKDFIFVHGYIEPVMVILHERELTWAG 272
D G A S V++L D+ + K+++D +F+ G+ P + +L TW+G
Sbjct: 221 ---DPLSEGFSRDAPYSPSFVLSLSDMSITIKNIQDLLFLPGFHSPTIALLFSPMHTWSG 277
Query: 273 RV-SWKHHTCM-ISALSISTTLKQHPLIWSAMNLPHDAYKLLAVPSPIGGVLVVGANTIH 330
R+ + K C+ I +S+ +PL+ S LP D+ L+A PS +GG+++V + I
Sbjct: 278 RLQTVKDTFCLEIRTFDLSSG-TSYPLLTSVSGLPSDSLYLVACPSELGGIVLVTSTGIV 336
Query: 331 YHSQ----SASCALALNNYAVSLDSSQELPRSSFSVELDAAHATWLQNDVALLSTKTGDL 386
+ Q +A+C A + SL S + S + L+ + ++ LL + G +
Sbjct: 337 HVDQGGRVTAACVNAWWSRITSLKCS--MASVSQKLTLEGSRCVFVTPHDMLLVLQNGAV 394
Query: 387 VLLTVVYDGR---VVQRLDLSKTNPSVLTSDITTIGNSLFFLGSRLGDSLLVQFTCGSGT 443
+ +GR V++ LD P SD+T G+ F+GS GDS L +
Sbjct: 395 HQVRFSMEGRAVGVIEVLDKGCVVPP--PSDLTVAGDGAVFVGSAEGDSWLAKVNVVRQV 452
Query: 444 SMLSSGLKEEFGDIEADAPSTKRLRRSSSDALQDMVNGEELSLYGSASNNTESAQKTFSF 503
S K+E +++ D + L +DA D E L+G A+ +
Sbjct: 453 VERSEKKKDEM-EVDWD----EDLYGDINDAALDEKAQE---LFGPAA---------ITL 495
Query: 504 AVRDSLVNIGPLKDFSYGL-----------------------RINADASATGISKQSNYE 540
+ D L +G + D +G+ IN I+K+ +
Sbjct: 496 SPYDILTGVGKIMDIEFGIAASDQGLRTYPQLVAVSGGSRNSTINVFRRGIPITKRRRFN 555
Query: 541 LVELPGCKGIWTVYHKSSRGHNADSSRMAAYDDEYHAYLIISLEARTMVLETADLLTEVT 600
EL +G+W + G + + A +++S E L ++ T
Sbjct: 556 --ELLNAEGVWFLPIDRQTGQ-----KFKDIPEAERATILLSSEGNAT--RVFALFSKPT 606
Query: 601 ESVDYFVQGRTIAAGNLFGRRRVIQVFERGARILDGSYMTQDLSFGPSNSESGSGSENST 660
+ G+T++A F R +++V +LD + G +
Sbjct: 607 PQQIGRLDGKTLSAAPFFQRSCILRVSPLEVVLLDNN--------GKIIQTVCPRGDGPK 658
Query: 661 VLSVSIADPYVLLGMSDGSIRLLVGDPSTCTVSVQTPAAIESSKKPVSSCTLYHD 715
+++ SI+DP+V++ +D S+ VGD TV+ + P E + ++ D
Sbjct: 659 IVNASISDPFVIIRRADDSVTFFVGDTVARTVA-EAPIVSEGESPVCQAVEVFTD 712
>sp|Q6BHK3|CFT1_DEBHA Protein CFT1 OS=Debaryomyces hansenii (strain ATCC 36239 / CBS 767
/ JCM 1990 / NBRC 0083 / IGC 2968) GN=CFT1 PE=3 SV=2
Length = 1342
Score = 92.4 bits (228), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 91/415 (21%), Positives = 178/415 (42%), Gaps = 64/415 (15%)
Query: 58 LVVTAANVIEIYVVRVQEEGSKESKNSGETKRRVLMDGISAASLELVCHYRLHGNVESLA 117
L+V A V++++ + E +++ K L+LV ++LHG + +
Sbjct: 29 LIVGKATVLQVFEIITTETKTQQYK------------------LKLVEQFKLHGLITDIK 70
Query: 118 ILSQGGADNSRRRDSIILAFEDAKISVLEFDDSIHGLRITSMHCFESPEWLHLKRGRESF 177
+ +NS+ D ++++ + AK+S++++D ++ + S+H +E+ E
Sbjct: 71 AIRT--VENSQL-DYLLVSSKGAKMSLIKWDHHLNSISTVSLHYYENSIQ---SSTYEKL 124
Query: 178 ARGPLVKVDPQGRCGGVLVYGLQMII-----------------LKASQGGSGLVGDEDTF 220
LV V+P C + L + + S G +++
Sbjct: 125 TTTDLV-VEPNNNCTCLRFKNLLTFLPFETLDEEEEDDDDDEEMNGSSGSDKKATNKENG 183
Query: 221 GSGGG-FSARIESSHVINLRDLDMK--HVKDFIFVHGYIEPVMVILHERELTWAGRVSWK 277
S G S ESS +I+ R LD + + D F++ Y EP + I+ + WAG +
Sbjct: 184 NSNGEEVSELFESSFMIDGRTLDSRIGDIIDMQFLYNYREPTIAIIFSKAHAWAGNLPKV 243
Query: 278 HHTCMISALSISTTLKQHPLIWSAMNLPHDAYKLLAVPSPIGGVLVVGAN-TIHYHSQSA 336
LS+ K + NLP D K++ +P P+ G L++G N IH +
Sbjct: 244 KDNINFIVLSLDLVTKASTTVLKIDNLPFDIDKIIPLPQPLNGSLLMGCNEIIHVDNGGI 303
Query: 337 SCALALNNYAVSLDSSQE--LPRSSFSVELDAAHATWLQND-VALLSTKTGDLVLLTVVY 393
+ LALN + S+ +S + +S +++L+ + ND L+ GD +
Sbjct: 304 TRRLALNQFTSSITTSLKNYHDQSDLNLKLENCSVKPIPNDNKVLMILNNGDFYYINFKI 363
Query: 394 DGRVVQRL-----------DLSKTNPSVLTSDITTIGNSLFFLGSRLGDSLLVQF 437
DG+ +++ D+ T P +I T+ N+L F+ ++ G++ L++
Sbjct: 364 DGKTIKKFFVEKVSDLNYDDIQLTYP----GEIATLDNNLMFISNKNGNNPLLEL 414
Score = 58.2 bits (139), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/259 (22%), Positives = 114/259 (44%), Gaps = 29/259 (11%)
Query: 881 NVSASRLRNLRFSRTPLDAYTREETPHGAPCQRITIFKNISGHQGFFLSGSRPCWCMVFR 940
N + ++L + P +AY+ T +R+ F N++G F++G P +
Sbjct: 810 NFKLVKEKDLIITGAPDNAYSLGTTIE----RRLVYFPNVNGFTSIFVTGITPYYISKTT 865
Query: 941 ERLRVHPQLCDGSIVAFTVLHNVNCNHGFIYVTSQGILKICQLPSGSTYDNYWPVQKVIP 1000
+ + V+F + +G IY+ + +IC++P Y+N WP++K IP
Sbjct: 866 HSVPRIFKFTKLPAVSFAPYSDDKIKNGLIYLDNSKNARICEIPVDFNYENNWPIKK-IP 924
Query: 1001 LKATPHQITYFAEKNLYPLIVSVPVLKPLNQVLSLLIDQEVGHQIDNHNLS--SVDLHRT 1058
+K + +TY N + V+ ++ +D+E G I + S S + ++
Sbjct: 925 IKESIKSVTYHELSNTF-------VISTYEEIPYDCLDEE-GKPIVGVDKSKPSANSYKG 976
Query: 1059 YTVEEYEVRILEPDRAGGPWQTRATIPMQSSENALTVRVVTL-FNTTTKE---NETLLAI 1114
Y ++++ P W TI + E + V+ + L ++TK+ + L+ I
Sbjct: 977 Y------IKLISPYN----WSVIDTIELVDGEIGMNVQSMVLDVGSSTKKFKNKKELIVI 1026
Query: 1115 GTAYVQGEDVAARGRVLLF 1133
GT + ED++A G +F
Sbjct: 1027 GTGKYRMEDLSANGSFKIF 1045
>sp|Q5AFT3|CFT1_CANAL Protein CFT1 OS=Candida albicans (strain SC5314 / ATCC MYA-2876)
GN=CFT1 PE=3 SV=1
Length = 1420
Score = 76.6 bits (187), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 104/221 (47%), Gaps = 17/221 (7%)
Query: 231 ESSHVINLRDLD--MKHVKDFIFVHGYIEPVMVILHERELTWAGRVSWKHHTCMISALSI 288
+SS +I+ LD + V D F+H Y EP + +L ++ WAG + L++
Sbjct: 217 DSSFIIDATTLDSSIDTVVDMQFLHNYREPTIAVLSSKQEVWAGNLIKSKDNIQFQVLTL 276
Query: 289 STTLKQHPLIWSAMNLPHDAYKLLAVPSPIGGVLVVGANT-IHYHSQSASCALALNNY-- 345
LK ++ NLP++ +++ +PSP+ G L+VG N IH + +A+N +
Sbjct: 277 DLNLKSTISVFKIDNLPYEIDRIIPLPSPLNGTLLVGCNELIHVDNGGVLKRIAVNKFTR 336
Query: 346 --AVSLDSSQELPRSSFSVELDAAHATWLQND-VALLSTKTGDLVLLTVVYDGRVVQRLD 402
S S Q+ +S +++L+ + +D LL +TG+ + DG+ ++R+
Sbjct: 337 LITASFKSFQD--QSDLNLKLENCSVVPIPDDHRVLLILQTGEFYFINFELDGKSIKRIH 394
Query: 403 LSKTNPSVLTS-------DITTIGNSLFFLGSRLGDSLLVQ 436
+ + ++ + ++ F+ + G+S L+Q
Sbjct: 395 IDNVDKKTYDKIQLNHPGEVAILDKNMLFIANSNGNSPLIQ 435
>sp|Q6CTT2|CFT1_KLULA Protein CFT1 OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 /
DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) GN=CFT1 PE=3
SV=1
Length = 1300
Score = 76.3 bits (186), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 136/639 (21%), Positives = 257/639 (40%), Gaps = 111/639 (17%)
Query: 98 AASLELVCHYRLHGNVESLAILSQGGADNSRRRDSIILAFEDAKISVLEFDDSIHGLRIT 157
A L L ++L G + + +L Q G S + IL+ +K+S++ FD L
Sbjct: 45 AQKLVLAYEWKLAGKIIDMQLLPQIG---SPLKMLAILS-SKSKVSLVRFDPVAESLETL 100
Query: 158 SMHCFESPEWLHLKRGRESFARGPLVKVDPQGRCGGVLVYGLQMI-ILKASQGGSGLVGD 216
S+H + ++++L S ++ VDP RC +LV+ ++ IL + D
Sbjct: 101 SLHYYHD-KFVNL--STSSLKTESIMAVDPLFRC--LLVFNEDVLAILPLKLNTEDMEID 155
Query: 217 EDTFGSGGGFSARIESSHVINLRDLDM---------KHVKDFIFVHGYIEPVMVILHERE 267
ED G + R++ + I + M KHV D +++ + +P + IL++
Sbjct: 156 EDENGIKEPMAKRLKRNQGITSDSIIMPISSLHKSLKHVYDIKWLNNFSKPTVGILYQPV 215
Query: 268 LTWAGRVSWKHHTCMISALSISTTLKQHPLIWSAMNLPHDAYKLLAVPSPIGGVLVVGAN 327
L W G +T LS+ ++ +I +LP+D + L VP G VL +G N
Sbjct: 216 LAWCGNEKVLGNTMRYMVLSLDVEDEKTTVIAELADLPNDLHTL--VPLKRGYVL-IGVN 272
Query: 328 TIHYHSQSA---SCALALNNYAVSLDSSQELPRSSFSVELDAA----HATWLQNDVALLS 380
+ Y S S SC + LN +A S +++ S ++ L + + ++D+ +L
Sbjct: 273 ELLYISASGALQSC-IRLNTFATSSINTRITDNSDMNIFLSKSSIYFYKALKRHDLLILI 331
Query: 381 TKTGDLVLLTVVYDGRVVQRLDLSKTNPSVLTSDITTIGNSLFFLGSRL-----GD---- 431
+ + + +G ++ + D + I N + F SRL GD
Sbjct: 332 DENCRMYNIITESEGNLLTKFDCVQ----------VPIVNEI-FKNSRLPLSVCGDLNLE 380
Query: 432 --SLLVQFTCGSGTSMLSSGLKEEFGDIEADAPSTKRLRRSSSDALQDMVNGEELSLYGS 489
+L+ F G + LK F + ++L + D E +LYG
Sbjct: 381 TGRVLIGFLSGDAMFLQLKNLKVAFA-------AKRQLVETVDDDDD-----EYSALYGE 428
Query: 490 ASNNTES----AQKTFSFAVRDSLVNIGPLKDFSYGLRINADASATGISKQSNYELVELP 545
+ NNT + Q+ F ++ DS+ NIGPL + G + + + + + E +
Sbjct: 429 SQNNTHTRIVETQEPFDISLLDSIFNIGPLTSLTIGKVASVEPTIQRLPNPNKDEF-SIV 487
Query: 546 GCKGI-----WTVYHKSSRGHNADSSRMAAYDDEYHAYLIISLEARTMVLETADLLTEVT 600
G+ T H + + H + + + ++ + ++ + L T D E +
Sbjct: 488 ATSGVGRGSHLTALHSTVQPHIEQALKFTSATRIWN----LKIKGKDKYLVTTDADKEKS 543
Query: 601 E------------SVDYFVQGRTIAAGNLFGRRRVIQVFERGARILDGSY-----MTQDL 643
+ + D+ RTI + +R++QV G + D + +T D+
Sbjct: 544 DVYQIDRNFEPFRAQDFRKDSRTIGMETMDDDKRILQVTSGGLYLFDVDFKRLARLTIDI 603
Query: 644 SFGPSNSESGSGSENSTVLSVSIADPYVLLGMSDGSIRL 682
++ I DPY+L + G+I++
Sbjct: 604 E----------------IVHACIIDPYILFTDARGNIKI 626
>sp|Q6E7D1|DDB1_SOLCE DNA damage-binding protein 1 OS=Solanum cheesmanii GN=DDB1 PE=3
SV=1
Length = 1095
Score = 68.2 bits (165), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 119/540 (22%), Positives = 204/540 (37%), Gaps = 143/540 (26%)
Query: 57 NLVVTAANVIEIYVVRVQEEGSKESKNSGETKRRVLMDGISAASLELVCHYRLHGNVESL 116
NL++ IEI+++ Q G+ L+ + ++G + +L
Sbjct: 31 NLIIAKCTRIEIHLLTPQ--------------------GLQCICLQPMLDVPIYGRIATL 70
Query: 117 AILSQGGADNSRRRDSIILAFEDAKISVLEFDDSIHGLRITSMHCFESPEWLHLKRGRES 176
+ G +D + +A E K VL++D + +M + GR +
Sbjct: 71 ELFRPHG----ETQDLLFIATERYKFCVLQWDTEASEVITRAMGDVSD------RIGRPT 120
Query: 177 FARGPLVKVDPQGRCGGVLVY-GLQMIILKASQGGSGLVGDEDTFGSGGGFSARIESSHV 235
G + +DP R G+ +Y GL +I ++G F+ R+E V
Sbjct: 121 -DNGQIGIIDPDCRLIGLHLYDGLFKVIPFDNKGQLK-----------EAFNIRLEELQV 168
Query: 236 INLRDLDMKHVKDFIFVHGYIEPVMVILHERELTWAGRVSWKHHTCMISALSISTTLKQH 295
++++ F++G +P +V+L++ +H + +LK
Sbjct: 169 LDIK-----------FLYGCPKPTIVVLYQ------DNKDARH------VKTYEVSLKDK 205
Query: 296 PLI---WSAMNLPHDAYKLLAVPSPIGGVLVVGANTIHYHSQSASCALALNNYAVSLDSS 352
I W+ NL + A L+ VP P+ GVL++G TI Y S SA A+ +
Sbjct: 206 DFIEGPWAQNNLDNGASLLIPVPPPLCGVLIIGEETIVYCSASAFKAIPIR--------- 256
Query: 353 QELPRSSFSVELDAAHATWLQNDVALLSTKTGDLVLLTVVYDGRVVQRLDLSKTNPSVLT 412
+ R+ V+ D + LL G L LL + ++ V L + + +
Sbjct: 257 PSITRAYGRVDADGSR--------YLLGDHNGLLHLLVITHEKEKVTGLKIELLGETSIA 308
Query: 413 SDITTIGNSLFFLGSRLGDSLLVQFTCGSGTSMLSSGLKEEFGDIEADAPSTKRLRRSSS 472
S I+ + N+ F+GS GDS LV+ P TK S
Sbjct: 309 STISYLDNAFVFIGSSYGDSQLVKLNL---------------------QPDTK---GSYV 344
Query: 473 DALQDMVNGEELSLYGSASNNTESAQK--TFSFAVRDSLVNIGPLKDFSYGLRINADASA 530
+ L+ VN + + + + T S A +D G L+ G+ IN AS
Sbjct: 345 EVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKD-----GSLRIVRNGIGINEQAS- 398
Query: 531 TGISKQSNYELVELPGCKGIWTVYHKSSRGHNADSSRMAAYDDEYHAYLIISLEARTMVL 590
VEL G KG+W++ +A DD Y +L++S + T VL
Sbjct: 399 -----------VELQGIKGMWSL--------------RSATDDPYDTFLVVSFISETRVL 433
>sp|Q6QNU4|DDB1_SOLLC DNA damage-binding protein 1 OS=Solanum lycopersicum GN=DDB1 PE=1
SV=1
Length = 1090
Score = 67.4 bits (163), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 113/507 (22%), Positives = 196/507 (38%), Gaps = 123/507 (24%)
Query: 90 RVLMDGISAASLELVCHYRLHGNVESLAILSQGGADNSRRRDSIILAFEDAKISVLEFDD 149
R+ + ++ L+ + ++G + +L + G +D + +A E K VL++D
Sbjct: 39 RIEIHLLTPQGLQPMLDVPIYGRIATLELFRPHG----ETQDLLFIATERYKFCVLQWDT 94
Query: 150 SIHGLRITSMHCFESPEWLHLKRGRESFARGPLVKVDPQGRCGGVLVY-GLQMIILKASQ 208
+ +M + GR + G + +DP R G+ +Y GL +I ++
Sbjct: 95 EASEVITRAMGDVSD------RIGRPT-DNGQIGIIDPDCRLIGLHLYDGLFKVIPFDNK 147
Query: 209 GGSGLVGDEDTFGSGGGFSARIESSHVINLRDLDMKHVKDFIFVHGYIEPVMVILHEREL 268
G F+ R+E V++++ F++G +P +V+L++
Sbjct: 148 GQLK-----------EAFNIRLEELQVLDIK-----------FLYGCPKPTIVVLYQ--- 182
Query: 269 TWAGRVSWKHHTCMISALSISTTLKQHPLI---WSAMNLPHDAYKLLAVPSPIGGVLVVG 325
+H + +LK I W+ NL + A L+ VP P+ GVL++G
Sbjct: 183 ---DNKDARH------VKTYEVSLKDKDFIEGPWAQNNLDNGASLLIPVPPPLCGVLIIG 233
Query: 326 ANTIHYHSQSASCALALNNYAVSLDSSQELPRSSFSVELDAAHATWLQNDVALLSTKTGD 385
TI Y S SA A+ + + R+ V+ D + LL G
Sbjct: 234 EETIVYCSASAFKAIPIR---------PSITRAYGRVDADGSR--------YLLGDHNGL 276
Query: 386 LVLLTVVYDGRVVQRLDLSKTNPSVLTSDITTIGNSLFFLGSRLGDSLLVQFTCGSGTSM 445
L LL + ++ V L + + + S I+ + N+ F+GS GDS LV+
Sbjct: 277 LHLLVITHEKEKVTGLKIELLGETSIASTISYLDNAFVFIGSSYGDSQLVKLNL------ 330
Query: 446 LSSGLKEEFGDIEADAPSTKRLRRSSSDALQDMVNGEELSLYGSASNNTESAQK--TFSF 503
P TK S + L+ VN + + + + T S
Sbjct: 331 ---------------QPDTK---GSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSG 372
Query: 504 AVRDSLVNIGPLKDFSYGLRINADASATGISKQSNYELVELPGCKGIWTVYHKSSRGHNA 563
A +D G L+ G+ IN AS VEL G KG+W++
Sbjct: 373 AYKD-----GSLRIVRNGIGINEQAS------------VELQGIKGMWSL---------- 405
Query: 564 DSSRMAAYDDEYHAYLIISLEARTMVL 590
+A DD Y +L++S + T VL
Sbjct: 406 ----RSATDDPYDTFLVVSFISETRVL 428
>sp|O49552|DDB1B_ARATH DNA damage-binding protein 1b OS=Arabidopsis thaliana GN=DDB1B PE=2
SV=2
Length = 1088
Score = 64.7 bits (156), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 111/513 (21%), Positives = 202/513 (39%), Gaps = 135/513 (26%)
Query: 90 RVLMDGISAASLELVCHYRLHGNVESLAILSQGGADNSRRRDSIILAFEDAKISVLEFDD 149
R+ + +S L+ + L+G + ++ + G +D + +A E K VL++D
Sbjct: 39 RIEIHLLSPQGLQTILDVPLYGRIATMELFRPHG----EAQDFLFVATERYKFCVLQWD- 93
Query: 150 SIHGLRITSMHCFESPEWLHLKRGRES------FARGPLVKVDPQGRCGGVLVY-GLQMI 202
+ES E + G S G + +DP R G+ +Y GL +
Sbjct: 94 ------------YESSELITRAMGDVSDRIGRPTDNGQIGIIDPDCRVIGLHLYDGLFKV 141
Query: 203 ILKASQGGSGLVGDEDTFGSGGGFSARIESSHVINLRDLDMKHVKDFIFVHGYIEPVMVI 262
I ++G F+ R+E V++++ F++G +P + +
Sbjct: 142 IPFDNKGQLK-----------EAFNIRLEELQVLDIK-----------FLYGCTKPTIAV 179
Query: 263 LHERELTWAGRVSWKHHTCMISALSISTTLKQHPLI---WSAMNLPHDAYKLLAVPSPIG 319
L++ +H + +LK + WS NL + A L+ VPSP+
Sbjct: 180 LYQ------DNKDARH------VKTYEVSLKDKNFVEGPWSQNNLDNGADLLIPVPSPLC 227
Query: 320 GVLVVGANTIHYHSQSASCALALNNYAVSLDSSQELPRSSFSVELDAAHATWLQNDVALL 379
GVL++G TI Y S +A A+ + + ++ V+LD + LL
Sbjct: 228 GVLIIGEETIVYCSANAFKAIPIR---------PSITKAYGRVDLDGSR--------YLL 270
Query: 380 STKTGDLVLLTVVYDGRVVQRLDLSKTNPSVLTSDITTIGNSLFFLGSRLGDSLLVQFTC 439
G + LL + ++ V L + + + S I+ + N++ F+GS GDS L++
Sbjct: 271 GDHAGLIHLLVITHEKEKVTGLKIELLGETSIASSISYLDNAVVFVGSSYGDSQLIKL-- 328
Query: 440 GSGTSMLSSGLKEEFGDIEADAPSTKRLRRSSSDALQDMVNGEELSLYGSASNNTESAQK 499
+++ DA + S + L+ VN + + + +
Sbjct: 329 ----------------NLQPDA------KGSYVEILEKYVNLGPIVDFCVVDLERQGQGQ 366
Query: 500 --TFSFAVRDSLVNIGPLKDFSYGLRINADASATGISKQSNYELVELPGCKGIWTVYHKS 557
T S A +D G L+ G+ IN AS VEL G KG+W++ KS
Sbjct: 367 VVTCSGAYKD-----GSLRIVRNGIGINEQAS------------VELQGIKGMWSL--KS 407
Query: 558 SRGHNADSSRMAAYDDEYHAYLIISLEARTMVL 590
S D+ + +L++S + T +L
Sbjct: 408 S------------IDEAFDTFLVVSFISETRIL 428
>sp|Q9XYZ5|DDB1_DROME DNA damage-binding protein 1 OS=Drosophila melanogaster GN=pic PE=1
SV=1
Length = 1140
Score = 59.3 bits (142), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 67/264 (25%), Positives = 108/264 (40%), Gaps = 53/264 (20%)
Query: 180 GPLVKVDPQGRCGGVLVYGLQMIILKASQGGSGLVGDEDTFGSGGGFSARIESSHVINLR 239
G + +DP+ R G+ +Y I+ + S L NLR
Sbjct: 119 GVIAAIDPKARVIGMCLYQGLFTIIPMDKDASEL--------------------KATNLR 158
Query: 240 DLDMKHVKDFIFVHGYIEPVMVILHERELTWAGRVSWKHHTCMISALSISTTLKQHPLI- 298
+D +V D F+HG + P ++++H+ GR H I+ K+ I
Sbjct: 159 -MDELNVYDVEFLHGCLNPTVIVIHKDS---DGRHVKSHE--------INLRDKEFMKIA 206
Query: 299 WSAMNLPHDAYKLLAVPSPIGGVLVVGANTIHYHSQSASCALALNNYAVSLDSSQELPRS 358
W N+ +A L+ VPSPIGGV+V+G +I YH S N +AV+
Sbjct: 207 WKQDNVETEATMLIPVPSPIGGVIVIGRESIVYHDGS-------NYHAVA--------PL 251
Query: 359 SFSVELDAAHATWLQNDVA-LLSTKTGDLVLLTV----VYDGRVVQRLDLSKTNPSVLTS 413
+F +A N + LL G L +L + G V+ + + + +
Sbjct: 252 TFRQSTINCYARVSSNGLRYLLGNMDGQLYMLFLGTAETSKGVTVKDIKVEQLGEISIPE 311
Query: 414 DITTIGNSLFFLGSRLGDSLLVQF 437
IT + N ++G+R GDS LV+
Sbjct: 312 CITYLDNGFLYIGARHGDSQLVRL 335
>sp|Q6FSD2|CFT1_CANGA Protein CFT1 OS=Candida glabrata (strain ATCC 2001 / CBS 138 / JCM
3761 / NBRC 0622 / NRRL Y-65) GN=CFT1 PE=3 SV=1
Length = 1361
Score = 57.4 bits (137), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 132/674 (19%), Positives = 265/674 (39%), Gaps = 122/674 (18%)
Query: 96 ISAASLELVCHYRLHGNVESLAIL---SQGGADNSRRRDSIILAFEDAKISVLEFDDSIH 152
I + L L+ ++L G + +A++ S G N ++L+ AK+S+L +++
Sbjct: 43 IRSGRLYLMEEHKLSGRINDVALIPKHSNGSNGNGINLSYLLLSTGVAKLSLLMYNNMTS 102
Query: 153 GLRITSMHC----FESPEWLHLKRGRESFARGPLVKVDPQGRCGGVLVYGLQMIILKASQ 208
+ S+H FES L L AR ++++P G +++ ++ +
Sbjct: 103 SIETISLHFYEDKFESATMLDL-------ARNSQLRIEPNGNYA--MLFNNDVLAILPFY 153
Query: 209 GGSGLVGDED----------------TFGSGGGFSARIESSH---VINLRDL--DMKHVK 247
G DED F G + + +H +IN +L +K++K
Sbjct: 154 TGINEDEDEDYINNDKSKINDNSKKSLFKRKKGKTQNNKVTHPSIIINCSELGPQIKNIK 213
Query: 248 DFIFVHGYIEPVMVILHERELTWAGR---VSWKHHTCMIS---ALSISTTLKQHPLIWSA 301
D F+ G+ + + +L++ +L W G V + +IS SI T +I
Sbjct: 214 DIQFLCGFTKSTIGVLYQPQLAWCGNSQLVPLPTNYAIISLDMKFSIDATTFDKAIISEI 273
Query: 302 MNLPHDAYKLLAVPSPIGGVLVVGANTIHYHSQSA--SCALALNNYAVS-LDSSQELPRS 358
LP D + + + G L++G N I + + L LN+Y+ L + + +S
Sbjct: 274 SQLPSDWH---TIAPTLSGSLILGVNEIAFLDNTGVLQSILTLNSYSDKVLPKVRVIDKS 330
Query: 359 SFSVELDAAHATWL----QNDVA----LLSTKTGDLVLLTVVYDGRVVQRLDLS------ 404
S V + L +N+ + LL + G + + + +GR++ + +++
Sbjct: 331 SHEVFFNTGSKFALIPSNENERSVENILLFDENGCIFNVDLKSEGRLLTQFNITKLPLGE 390
Query: 405 -----KTNP---SVLTSDITTIGNSLFFLGSRLGDSLLVQFT-CGSGTSMLSSGLKEEFG 455
K+NP S++ +D + F+G + GD+ +++ S + +++
Sbjct: 391 DVLSQKSNPSSVSIIWAD-GRLDTYTIFIGFQSGDATMLKLNHLHSAIEVEEPTFMKDYV 449
Query: 456 DIEADAPSTKRLRRSS-------SDALQDMVNGEELSLYGS-ASNNTESAQKTFSFAVRD 507
+ +A A SD D VN + +G+ SN +AQ+
Sbjct: 450 NKQASAAYNNEDDDDDDDDFNLYSDEENDQVNNKNDRTFGTNESNEPFTAQELM------ 503
Query: 508 SLVNIGPLKDFSYGLRINADASATGISKQSNYELVELPGCKGIWTVYHKSSRGHNADSSR 567
L NIGP+ G + + + G+ + E+ + T + NA +
Sbjct: 504 ELRNIGPINSMCVGKVSSIEDNVKGLPNPNKQEI------SIVCTSGYGDGSHLNAILAS 557
Query: 568 MAAYDDEYHAYLIIS------LEARTMVLETADL------LTEVTESVDYFVQGR----- 610
+ ++ ++ I+ ++ + L T D + E+ + QGR
Sbjct: 558 VQPRVEKALKFISITKIWNLHIKGKDKFLITTDSTQSQSNIYEIDNNFSQHKQGRLRRDA 617
Query: 611 -TIAAGNLFGRRRVIQVFERGARILDGSYMTQDLSFGPSNSESGSGSENSTVLSVSIADP 669
TI + +R++QV + D ++ + + V+ VS+ DP
Sbjct: 618 TTIHIATIGDNKRIVQVTTNHLYLYDLTF-----------RRFSTIKFDYEVVHVSVMDP 666
Query: 670 YVLLGMSDGSIRLL 683
YVL+ +S G I++
Sbjct: 667 YVLITLSRGDIKVF 680
>sp|Q9M0V3|DDB1A_ARATH DNA damage-binding protein 1a OS=Arabidopsis thaliana GN=DDB1A PE=1
SV=1
Length = 1088
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 107/507 (21%), Positives = 199/507 (39%), Gaps = 123/507 (24%)
Query: 90 RVLMDGISAASLELVCHYRLHGNVESLAILSQGGADNSRRRDSIILAFEDAKISVLEFDD 149
R+ + ++ L+ + ++G + +L + G +D + +A E K VL++D
Sbjct: 39 RIEIHLLTPQGLQPMLDVPIYGRIATLELFRPHG----EAQDFLFIATERYKFCVLQWDP 94
Query: 150 SIHGLRITSMHCFESPEWLHLKRGRESFARGPLVKVDPQGRCGGVLVY-GLQMIILKASQ 208
L +M + GR + G + +DP R G+ +Y GL +I ++
Sbjct: 95 ESSELITRAMGDVSD------RIGRPT-DNGQIGIIDPDCRLIGLHLYDGLFKVIPFDNK 147
Query: 209 GGSGLVGDEDTFGSGGGFSARIESSHVINLRDLDMKHVKDFIFVHGYIEPVMVILHEREL 268
G F+ R+E V++++ F+ G +P + +L++
Sbjct: 148 GQLK-----------EAFNIRLEELQVLDIK-----------FLFGCAKPTIAVLYQ--- 182
Query: 269 TWAGRVSWKHHTCMISALSISTTLKQHPLI---WSAMNLPHDAYKLLAVPSPIGGVLVVG 325
+H + +LK + WS +L + A L+ VP P+ GVL++G
Sbjct: 183 ---DNKDARH------VKTYEVSLKDKDFVEGPWSQNSLDNGADLLIPVPPPLCGVLIIG 233
Query: 326 ANTIHYHSQSASCALALNNYAVSLDSSQELPRSSFSVELDAAHATWLQNDVALLSTKTGD 385
TI Y S SA A+ + + ++ V++D + LL G
Sbjct: 234 EETIVYCSASAFKAIPIR---------PSITKAYGRVDVDGSR--------YLLGDHAGM 276
Query: 386 LVLLTVVYDGRVVQRLDLSKTNPSVLTSDITTIGNSLFFLGSRLGDSLLVQFTCGSGTSM 445
+ LL + ++ V L + + + S I+ + N++ F+GS GDS LV+
Sbjct: 277 IHLLVITHEKEKVTGLKIELLGETSIASTISYLDNAVVFVGSSYGDSQLVKL-------- 328
Query: 446 LSSGLKEEFGDIEADAPSTKRLRRSSSDALQDMVNGEELSLYGSASNNTESAQK--TFSF 503
++ DA + S + L+ +N + + + + T S
Sbjct: 329 ----------NLHPDA------KGSYVEVLERYINLGPIVDFCVVDLERQGQGQVVTCSG 372
Query: 504 AVRDSLVNIGPLKDFSYGLRINADASATGISKQSNYELVELPGCKGIWTVYHKSSRGHNA 563
A +D G L+ G+ IN AS VEL G KG+W++ KSS
Sbjct: 373 AFKD-----GSLRVVRNGIGINEQAS------------VELQGIKGMWSL--KSS----- 408
Query: 564 DSSRMAAYDDEYHAYLIISLEARTMVL 590
D+ + +L++S + T +L
Sbjct: 409 -------IDEAFDTFLVVSFISETRIL 428
>sp|Q75EY8|CFT1_ASHGO Protein CFT1 OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 /
FGSC 9923 / NRRL Y-1056) GN=CFT1 PE=3 SV=1
Length = 1305
Score = 55.8 bits (133), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 120/624 (19%), Positives = 248/624 (39%), Gaps = 124/624 (19%)
Query: 140 AKISVLEFDDSIHGLRITSMHCFESP--EWLHLKRGRESFARGPLVKVDPQGRCGGVLVY 197
++S++ FD L S+H +++ E L G P ++ +P RC +LV+
Sbjct: 82 GRVSIVRFDAENQTLETESLHYYDAKFEELSALTVGA-----APRLEQEPAARC--LLVH 134
Query: 198 GLQMIILKASQGGSGLV-------------GDEDTFGSGGGFSARIESSHVINLRDLDMK 244
+ + +G D G G S + +SH+ + D+K
Sbjct: 135 NGDCLAVLPLRGHEEEGEEAEEEEEHPAKRARTDADGRLVGASTVMPASHLHS----DIK 190
Query: 245 HVKDFIFVHGYIEPVMVILHERELTWAGRVSWKHHTCMISALSISTTLKQHPLIWSAMNL 304
+VKD F+ G + + +L++ +L+W G T LS+ ++ +I L
Sbjct: 191 NVKDMRFLRGLNKSAVGVLYQPQLSWCGNEKLTRQTMKFIILSLDLDDEKSTVINMLQGL 250
Query: 305 PHDAYKLLAVPSPIGGVLVVGANTIHYHSQSASC--ALALNNYAVS-----------LDS 351
P+ + ++ + + G ++ G N + Y + + A++LN ++ S L +
Sbjct: 251 PNTLHTIIPLSN---GCVLAGVNELLYVDNTGALQGAISLNAFSNSGLNTRIQDNSKLQA 307
Query: 352 SQELPRSSFSVELDAAHATWLQNDVALLSTKTGDLVLLTVVYDGRVVQRL---------D 402
E P F+ + + D+ LL + + + + +GR++ +
Sbjct: 308 FFEQPLCYFATQSNG-------RDILLLMDEKARMYNVIIEAEGRLLTTFNCVQLPIVNE 360
Query: 403 LSKTN--PSVLTSDITTIGNSLFFLGSRLGDSLLVQFTCGSGTSMLSSGLKEEFGDIEAD 460
+ K N P+ + ++ SL F+G + GD++ V+ + L S L+
Sbjct: 361 IFKRNMMPTSICGNMNLETGSL-FIGFQSGDAMHVRL------NNLKSSLEH-------- 405
Query: 461 APSTKRLRRSSSDALQDMVNGEELSLYGSASNNTESAQKT------FSFAVRDSLVNIGP 514
+ + S+ L+ + + + LYG NN E +K F D L+NIGP
Sbjct: 406 -------KGTVSETLE--TDEDYMELYG---NNAEKEKKNLETESPFDIECLDRLLNIGP 453
Query: 515 LKDFSYGLRINADASATGISKQSNYELVELP----GCKGIWTVYHKSSRGHNADSSRMAA 570
+ + G + + + ++ + EL + G T+ + + + +
Sbjct: 454 VTSLAVGKASSIEHTVAKLANPNKDELSIVATSGNGTGSHLTILENTIVPTVQQALKFIS 513
Query: 571 YDDEYH-------AYLIISLEARTMV-LETADLLTEVTESVDYFVQGRTIAAGNLFGRRR 622
++ YL+ + ++T + + D + ++ D+ T++ G +R
Sbjct: 514 VTQIWNLKIKGKDKYLVTTDSSQTRSDIYSIDRDFKPFKAADFRKNDTTVSTAVTGGGKR 573
Query: 623 VIQVFERGARILDGSY---MTQDLSFGPSNSESGSGSENSTVLSVSIADPYVLLGMSDGS 679
++QV +G + D ++ MT + F V+ V I DP++LL S G
Sbjct: 574 IVQVTSKGVHLFDINFKRMMTMNFDF--------------EVVHVCIKDPFLLLTNSKGD 619
Query: 680 IRLLVGDPSTCTVSVQT--PAAIE 701
I++ +P V+T P A++
Sbjct: 620 IKIYELEPKHKKKFVKTVLPDALK 643
>sp|O13807|DDB1_SCHPO DNA damage-binding protein 1 OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=ddb1 PE=1 SV=1
Length = 1072
Score = 53.9 bits (128), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 95/492 (19%), Positives = 189/492 (38%), Gaps = 97/492 (19%)
Query: 174 RESFARGPLVKVDPQGRCGGVLVYGLQMIILKASQGGSGLVGDEDTFGSGGGFSARIESS 233
RES GPL+ VDP R + VY + I+ + + + FS RI+
Sbjct: 111 RES-QSGPLLLVDPFQRVICLHVYQGLLTIIPIFKSKKRFMTSHNNPSLHDNFSVRIQEL 169
Query: 234 HVINLRDLDMKHVKDFIFVHGYIEPVMVILHERELTWAGRVSWKHHTCMISALSISTTLK 293
+V+ D ++ P + +L +K ++ + ++
Sbjct: 170 NVV-----------DIAMLYNSSRPSLAVL------------YKDSKSIVHLSTYKINVR 206
Query: 294 QHPLIWSAMNLPHDAYKLLAVPSPIGGVLVVGANTIHYHSQSASCALALNNYAVSLDSSQ 353
+ + + + HD + +PS GGV V G ++Y S+ + L Y
Sbjct: 207 EQEIDEDDV-VCHDIEEGKLIPSENGGVFVFGEMYVYYISKDIQVSKLLLTY-------- 257
Query: 354 ELPRSSFSVELDAAHATWLQNDVALLSTKTGDLVLLTVVYDGRVVQRLDLSKTNPSVLTS 413
P ++FS + T L + + +++ ++G L ++ V ++L K S + S
Sbjct: 258 --PITAFSPSISNDPETGLDSSIYIVADESGMLYKFKALFTDETVS-MELEKLGESSIAS 314
Query: 414 DITTIGNSLFFLGSRLGDSLLVQFTCGSGTSMLSSGLKEEFGDIEADAPSTKRLRRSSSD 473
+ + ++ F+GS +S+L+Q PS + +
Sbjct: 315 CLIALPDNHLFVGSHFNNSVLLQL------------------------PSITK-NNHKLE 349
Query: 474 ALQDMVNGEELSLYGSASNNTESAQKTFSFAVRDSLVNIGPLKDFSYGLRINADASATGI 533
LQ+ VN +S + + T S+ T S A +D G L+ + I
Sbjct: 350 ILQNFVNIAPISDFIIDDDQTGSSIITCSGAYKD-----GTLRIIRNSINI--------- 395
Query: 534 SKQSNYELVELPGCKGIWTVYHKSSRGHNADSSRMAAYDDEYHAYLIISLEARTMVLETA 593
N L+E+ G K ++V S A YD+ + +L + E R +++
Sbjct: 396 ---ENVALIEMEGIKDFFSV------------SFRANYDN--YIFLSLICETRAIIVSPE 438
Query: 594 DLLTEVTESVDYFVQGRTIAAGNLFGRRRVIQVFERGARILDGSYMTQDLSFGPSNSESG 653
+ + + D + TI ++G +++Q+ + R+ DG + +S P + G
Sbjct: 439 GVF---SANHDLSCEESTIFVSTIYGNSQILQITTKEIRLFDGKKLHSWIS--PMSITCG 493
Query: 654 SGSENSTVLSVS 665
S ++ ++V+
Sbjct: 494 SSFADNVCVAVA 505
>sp|Q6P6Z0|DDB1_XENLA DNA damage-binding protein 1 OS=Xenopus laevis GN=ddb1 PE=2 SV=1
Length = 1140
Score = 51.6 bits (122), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 97/455 (21%), Positives = 172/455 (37%), Gaps = 110/455 (24%)
Query: 193 GVLVYGLQMIILKASQGGSGLVGDEDTFGSGGGFSARIESSHVINLRDLDMKHVKDFIFV 252
G++ +MI L+ G ++ E F+ R+E HVI+++ L FV
Sbjct: 122 GIIDPDCRMIGLRLYDGLFKVIPLERDNKELKAFNIRLEELHVIDVKFLYSCQAPTICFV 181
Query: 253 HG-----YIEPVMVILHERELTWAGRVSWKHHTCMISALSISTTLKQHPLIWSAMNLPHD 307
+ +++ V L E+E + + P W N+ +
Sbjct: 182 YQDPQGRHVKTYEVSLREKEFS------------------------KGP--WKQENVEAE 215
Query: 308 AYKLLAVPSPIGGVLVVGANTIHYHSQSASCALALNNYAVSLDSSQELPRSSFSV---EL 364
A ++AVP P GG +++G +I YH+ A+A + + S V +
Sbjct: 216 ASMVIAVPEPFGGAIIIGQESITYHNGDKYLAIA-----------PPIIKQSTIVCHNRV 264
Query: 365 DAAHATWLQNDVALLSTKTGDLVLLTV----VYDGRV-VQRLDLSKTNPSVLTSDITTIG 419
D + +L D+ G L +L + DG V ++ L + + + +T +
Sbjct: 265 DVNGSRYLLGDME------GRLFMLLLEKEEQMDGSVTLKDLRVELLGETSIAECLTYLD 318
Query: 420 NSLFFLGSRLGDSLLVQFTCGSGTSMLSSGLKEEFGDIEADAPSTKRLRRSSSDALQDMV 479
N + F+GSRLGDS LV+ T S + E F ++ + DM
Sbjct: 319 NGVVFVGSRLGDSQLVKLTTESNEQGSYVVVMETFTNL---------------GPIVDMC 363
Query: 480 NGEELSLYGSASNNTESAQKTFSFAVRDSLVNIGPLKDFSYGLRINADASATGISKQSNY 539
+ T S A ++ G L+ G+ I+ AS
Sbjct: 364 -------VVDLERQGQGQLVTCSGAFKE-----GSLRIIRNGIGIHEHAS---------- 401
Query: 540 ELVELPGCKGIWTVYHKSSRGHNADSSRMAAYDDEYHAYLIISLEARTMVLETADLLTEV 599
++LPG KG+W + R+AA D + L++S +T VL E
Sbjct: 402 --IDLPGIKGLWPL-------------RVAA-DRDTDDTLVLSFVGQTRVLTLTGEEVEE 445
Query: 600 TESVDYFVQGRTIAAGNLFGRRRVIQVFERGARIL 634
T+ + +T GN+ +++IQ+ R++
Sbjct: 446 TDLAGFVDDQQTFFCGNV-AHQQLIQITSASVRLV 479
>sp|Q3U1J4|DDB1_MOUSE DNA damage-binding protein 1 OS=Mus musculus GN=Ddb1 PE=1 SV=2
Length = 1140
Score = 50.8 bits (120), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 96/461 (20%), Positives = 173/461 (37%), Gaps = 116/461 (25%)
Query: 185 VDPQGRCGGVLVYGLQMIILKASQGGSGLVGDEDTFGSGGGFSARIESSHVINLRDLDMK 244
+DP+ R G+ +Y ++ + L F+ R+E HVI+++
Sbjct: 124 IDPECRMIGLRLYDGLFKVIPLDRDNKEL----------KAFNIRLEELHVIDVK----- 168
Query: 245 HVKDFIFVHGYIEPVMVILHERELTWAGRVSWKHHTCMISALSISTTLKQHPLIWSAMNL 304
F++G P + +++ GR H + P W N+
Sbjct: 169 ------FLYGCQAPTICFVYQDP---QGR-----HVKTYEVSLREKEFNKGP--WKQENV 212
Query: 305 PHDAYKLLAVPSPIGGVLVVGANTIHYHSQSASCALALNNYAVSLDSSQELPRSSFSV-- 362
+A ++AVP P GG +++G +I YH+ A+A + + S V
Sbjct: 213 EAEASMVIAVPEPFGGAIIIGQESITYHNGDKYLAIA-----------PPIIKQSTIVCH 261
Query: 363 -ELDAAHATWLQNDVALLSTKTGDLVLLTV----VYDGRV-VQRLDLSKTNPSVLTSDIT 416
+D + +L D+ G L +L + DG V ++ L + + + +T
Sbjct: 262 NRVDPNGSRYLLGDME------GRLFMLLLEKEEQMDGTVTLKDLRVELLGETSIAECLT 315
Query: 417 TIGNSLFFLGSRLGDSLLVQFTCGS---GTSMLSSGLKEEFGDIEADAPSTKRLRRSSSD 473
+ N + F+GSRLGDS LV+ S G+ +++ G I D R+
Sbjct: 316 YLDNGVVFVGSRLGDSQLVKLNVDSNEQGSYVVAMETFTNLGPI-VDMCVVDLERQGQGQ 374
Query: 474 ALQDMVNGEELSLYGSASNNTESAQKTFSFAVRDSLVNIGPLKDFSYGLRINADASATGI 533
+ T S A ++ G L+ G+ I+ AS
Sbjct: 375 LV------------------------TCSGAFKE-----GSLRIIRNGIGIHEHAS---- 401
Query: 534 SKQSNYELVELPGCKGIWTVYHKSSRGHNADSSRMAAYDDEYHAYLIISLEARTMVLETA 593
++LPG KG+W + +S G D + L++S +T VL
Sbjct: 402 --------IDLPGIKGLWPL--RSDPGRETDDT------------LVLSFVGQTRVLMLN 439
Query: 594 DLLTEVTESVDYFVQGRTIAAGNLFGRRRVIQVFERGARIL 634
E TE + + +T GN+ +++IQ+ R++
Sbjct: 440 GEEVEETELMGFVDDQQTFFCGNV-AHQQLIQITSASVRLV 479
>sp|Q5R649|DDB1_PONAB DNA damage-binding protein 1 OS=Pongo abelii GN=DDB1 PE=2 SV=1
Length = 1140
Score = 50.1 bits (118), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 109/550 (19%), Positives = 204/550 (37%), Gaps = 125/550 (22%)
Query: 96 ISAASLELVCHYRLHGNVESLAILSQGGADNSRRRDSIILAFEDAKISVLEFDDSIHGLR 155
++A L V ++G + + + G +D + + + +LE+ S +
Sbjct: 44 VTAEGLRPVKEVGMYGKIAVMELFRPKG----ESKDLLFILTAKYNVCILEYKQSGESID 99
Query: 156 ITSMHCFESPEWLHLKRGRESFARGPLVKVDPQGRCGGVLVYGLQMIILKASQGGSGLVG 215
I + + + + GR S G + +DP+ R G+ +Y ++ + L
Sbjct: 100 IIT----RAHGNVQDRIGRPS-ETGIIGIIDPECRMIGLRLYDGLFKVIPLDRDNKEL-- 152
Query: 216 DEDTFGSGGGFSARIESSHVINLRDLDMKHVKDFIFVHGYIEPVMVILHERELTWAGRVS 275
F+ R+E HVI+++ F++G P + +++ GR
Sbjct: 153 --------KAFNIRLEELHVIDVK-----------FLYGCQAPTICFVYQDP---QGR-- 188
Query: 276 WKHHTCMISALSISTTLKQHPLIWSAMNLPHDAYKLLAVPSPIGGVLVVGANTIHYHSQS 335
H + P W N+ +A ++AVP P GG +++G +I YH+
Sbjct: 189 ---HVKTYEVSLREKEFNKGP--WKQENVEAEASMVIAVPEPFGGAIIIGQESITYHNGD 243
Query: 336 ASCALALNNYAVSLDSSQELPRSSFSV---ELDAAHATWLQNDVALLSTKTGDLVLLTV- 391
A+A + + S V +D + +L D+ G L +L +
Sbjct: 244 KYLAIA-----------PPIIKQSTIVCHNRVDPNGSRYLLGDME------GRLFMLLLE 286
Query: 392 ---VYDGRV-VQRLDLSKTNPSVLTSDITTIGNSLFFLGSRLGDSLLVQFTCGS---GTS 444
DG V ++ L + + + +T + N + F+GSRLGDS LV+ S G+
Sbjct: 287 KEEQMDGTVTLKDLRVELLGETSIAECLTYLDNGVVFVGSRLGDSQLVKLNVDSNEQGSY 346
Query: 445 MLSSGLKEEFGDIEADAPSTKRLRRSSSDALQDMVNGEELSLYGSASNNTESAQKTFSFA 504
+++ G I D R+ + T S A
Sbjct: 347 VVAMETFTNLGPI-VDMCVVDLERQGQGQLV------------------------TCSGA 381
Query: 505 VRDSLVNIGPLKDFSYGLRINADASATGISKQSNYELVELPGCKGIWTVYHKSSRGHNAD 564
++ G L+ G+ I+ AS ++LPG KG+W + +R
Sbjct: 382 FKE-----GSLRIIRNGIGIHEHAS------------IDLPGIKGLWPLRSDPNR----- 419
Query: 565 SSRMAAYDDEYHAYLIISLEARTMVLETADLLTEVTESVDYFVQGRTIAAGNLFGRRRVI 624
E L++S +T VL E TE + + +T GN+ +++I
Sbjct: 420 ---------ETDDTLVLSFVGQTRVLMLNGEEVEETELMGFVDDQQTFFCGNV-AHQQLI 469
Query: 625 QVFERGARIL 634
Q+ R++
Sbjct: 470 QITSASVRLV 479
>sp|Q16531|DDB1_HUMAN DNA damage-binding protein 1 OS=Homo sapiens GN=DDB1 PE=1 SV=1
Length = 1140
Score = 48.9 bits (115), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 95/461 (20%), Positives = 171/461 (37%), Gaps = 116/461 (25%)
Query: 185 VDPQGRCGGVLVYGLQMIILKASQGGSGLVGDEDTFGSGGGFSARIESSHVINLRDLDMK 244
+DP+ R G+ +Y ++ + L F+ R+E HVI+++
Sbjct: 124 IDPECRMIGLRLYDGLFKVIPLDRDNKEL----------KAFNIRLEELHVIDVK----- 168
Query: 245 HVKDFIFVHGYIEPVMVILHERELTWAGRVSWKHHTCMISALSISTTLKQHPLIWSAMNL 304
F++G P + +++ GR H + P W N+
Sbjct: 169 ------FLYGCQAPTICFVYQDP---QGR-----HVKTYEVSLREKEFNKGP--WKQENV 212
Query: 305 PHDAYKLLAVPSPIGGVLVVGANTIHYHSQSASCALALNNYAVSLDSSQELPRSSFSV-- 362
+A ++AVP P GG +++G +I YH+ A+A + + S V
Sbjct: 213 EAEASMVIAVPEPFGGAIIIGQESITYHNGDKYLAIA-----------PPIIKQSTIVCH 261
Query: 363 -ELDAAHATWLQNDVALLSTKTGDLVLLTV----VYDGRV-VQRLDLSKTNPSVLTSDIT 416
+D + +L D+ G L +L + DG V ++ L + + + +T
Sbjct: 262 NRVDPNGSRYLLGDME------GRLFMLLLEKEEQMDGTVTLKDLRVELLGETSIAECLT 315
Query: 417 TIGNSLFFLGSRLGDSLLVQFTCGS---GTSMLSSGLKEEFGDIEADAPSTKRLRRSSSD 473
+ N + F+GSRLGDS LV+ S G+ +++ G I D R+
Sbjct: 316 YLDNGVVFVGSRLGDSQLVKLNVDSNEQGSYVVAMETFTNLGPI-VDMCVVDLERQGQGQ 374
Query: 474 ALQDMVNGEELSLYGSASNNTESAQKTFSFAVRDSLVNIGPLKDFSYGLRINADASATGI 533
+ T S A ++ G L+ G+ I+ AS
Sbjct: 375 LV------------------------TCSGAFKE-----GSLRIIRNGIGIHEHAS---- 401
Query: 534 SKQSNYELVELPGCKGIWTVYHKSSRGHNADSSRMAAYDDEYHAYLIISLEARTMVLETA 593
++LPG KG+W + +R E L++S +T VL
Sbjct: 402 --------IDLPGIKGLWPLRSDPNR--------------ETDDTLVLSFVGQTRVLMLN 439
Query: 594 DLLTEVTESVDYFVQGRTIAAGNLFGRRRVIQVFERGARIL 634
E TE + + +T GN+ +++IQ+ R++
Sbjct: 440 GEEVEETELMGFVDDQQTFFCGNV-AHQQLIQITSASVRLV 479
>sp|Q805F9|DDB1_CHICK DNA damage-binding protein 1 OS=Gallus gallus GN=DDB1 PE=2 SV=1
Length = 1140
Score = 48.9 bits (115), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 77/347 (22%), Positives = 132/347 (38%), Gaps = 85/347 (24%)
Query: 299 WSAMNLPHDAYKLLAVPSPIGGVLVVGANTIHYHSQSASCALALNNYAVSLDSSQELPRS 358
W N+ +A ++AVP P GG +++G +I YH+ A+A + +
Sbjct: 207 WKQENVEAEASMVIAVPEPFGGAIIIGQESITYHNGDKYLAIA-----------PPIIKQ 255
Query: 359 SFSV---ELDAAHATWLQNDVALLSTKTGDLVLLTV----VYDGRV-VQRLDLSKTNPSV 410
S V +D + +L D+ G L +L + DG V ++ L + +
Sbjct: 256 STIVCHNRVDPNGSRYLLGDME------GRLFMLLLEKEEQMDGTVTLKDLRVELLGETS 309
Query: 411 LTSDITTIGNSLFFLGSRLGDSLLVQFTCGS---GTSMLSSGLKEEFGDIEADAPSTKRL 467
+ +T + N + F+GSRLGDS LV+ S G+ +++ G I D
Sbjct: 310 IAECLTYLDNGVVFVGSRLGDSQLVKLNVDSNEQGSYVVAMETFTNLGPI-VDMCVVDLE 368
Query: 468 RRSSSDALQDMVNGEELSLYGSASNNTESAQKTFSFAVRDSLVNIGPLKDFSYGLRINAD 527
R+ + T S A ++ G L+ G+ I+
Sbjct: 369 RQGQGQLV------------------------TCSGAFKE-----GSLRIIRNGIGIHEH 399
Query: 528 ASATGISKQSNYELVELPGCKGIWTVYHKSSRGHNADSSRMAAYDDEYHAYLIISLEART 587
AS ++LPG KG+W + S R E L++S +T
Sbjct: 400 AS------------IDLPGIKGLWPLRSDSHR--------------EMDNMLVLSFVGQT 433
Query: 588 MVLETADLLTEVTESVDYFVQGRTIAAGNLFGRRRVIQVFERGARIL 634
VL E TE + +T GN+ +++IQ+ R++
Sbjct: 434 RVLMLNGEEVEETELTGFVDDQQTFFCGNV-AHQQLIQITSASVRLV 479
>sp|A1A4K3|DDB1_BOVIN DNA damage-binding protein 1 OS=Bos taurus GN=DDB1 PE=2 SV=1
Length = 1140
Score = 48.9 bits (115), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 95/461 (20%), Positives = 171/461 (37%), Gaps = 116/461 (25%)
Query: 185 VDPQGRCGGVLVYGLQMIILKASQGGSGLVGDEDTFGSGGGFSARIESSHVINLRDLDMK 244
+DP+ R G+ +Y ++ + L F+ R+E HVI+++
Sbjct: 124 IDPECRMIGLRLYDGLFKVIPLDRDNKEL----------KAFNIRLEELHVIDVK----- 168
Query: 245 HVKDFIFVHGYIEPVMVILHERELTWAGRVSWKHHTCMISALSISTTLKQHPLIWSAMNL 304
F++G P + +++ GR H + P W N+
Sbjct: 169 ------FLYGCQAPTICFVYQDP---QGR-----HVKTYEVSLREKEFNKGP--WKQENV 212
Query: 305 PHDAYKLLAVPSPIGGVLVVGANTIHYHSQSASCALALNNYAVSLDSSQELPRSSFSV-- 362
+A ++AVP P GG +++G +I YH+ A+A + + S V
Sbjct: 213 EAEASMVIAVPEPFGGAIIIGQESITYHNGDKYLAIA-----------PPIIKQSTIVCH 261
Query: 363 -ELDAAHATWLQNDVALLSTKTGDLVLLTV----VYDGRV-VQRLDLSKTNPSVLTSDIT 416
+D + +L D+ G L +L + DG V ++ L + + + +T
Sbjct: 262 NRVDPNGSRYLLGDME------GRLFMLLLEKEEQMDGTVTLKDLRVELLGETSIAECLT 315
Query: 417 TIGNSLFFLGSRLGDSLLVQFTCGS---GTSMLSSGLKEEFGDIEADAPSTKRLRRSSSD 473
+ N + F+GSRLGDS LV+ S G+ +++ G I D R+
Sbjct: 316 YLDNGVVFVGSRLGDSQLVKLNVDSNEQGSYVVAMETFTNLGPI-VDMCVVDLERQGQGQ 374
Query: 474 ALQDMVNGEELSLYGSASNNTESAQKTFSFAVRDSLVNIGPLKDFSYGLRINADASATGI 533
+ T S A ++ G L+ G+ I+ AS
Sbjct: 375 LV------------------------TCSGAFKE-----GSLRIIRNGIGIHEHAS---- 401
Query: 534 SKQSNYELVELPGCKGIWTVYHKSSRGHNADSSRMAAYDDEYHAYLIISLEARTMVLETA 593
++LPG KG+W + +R E L++S +T VL
Sbjct: 402 --------IDLPGIKGLWPLRSDPNR--------------ETDDTLVLSFVGQTRVLMLN 439
Query: 594 DLLTEVTESVDYFVQGRTIAAGNLFGRRRVIQVFERGARIL 634
E TE + + +T GN+ +++IQ+ R++
Sbjct: 440 GEEVEETELMGFVDDQQTFFCGNV-AHQQLIQITSASVRLV 479
>sp|P33194|DDB1_CHLAE DNA damage-binding protein 1 OS=Chlorocebus aethiops GN=DDB1 PE=1
SV=1
Length = 1140
Score = 48.9 bits (115), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 95/461 (20%), Positives = 171/461 (37%), Gaps = 116/461 (25%)
Query: 185 VDPQGRCGGVLVYGLQMIILKASQGGSGLVGDEDTFGSGGGFSARIESSHVINLRDLDMK 244
+DP+ R G+ +Y ++ + L F+ R+E HVI+++
Sbjct: 124 IDPECRMIGLRLYDGLFKVIPLDRDNKEL----------KAFNIRLEELHVIDVK----- 168
Query: 245 HVKDFIFVHGYIEPVMVILHERELTWAGRVSWKHHTCMISALSISTTLKQHPLIWSAMNL 304
F++G P + +++ GR H + P W N+
Sbjct: 169 ------FLYGCQAPTICFVYQDP---QGR-----HVKTYEVSLREKEFNKGP--WKQENV 212
Query: 305 PHDAYKLLAVPSPIGGVLVVGANTIHYHSQSASCALALNNYAVSLDSSQELPRSSFSV-- 362
+A ++AVP P GG +++G +I YH+ A+A + + S V
Sbjct: 213 EAEASMVIAVPEPFGGAIIIGQESITYHNGDKYLAIA-----------PPIIKQSTIVCH 261
Query: 363 -ELDAAHATWLQNDVALLSTKTGDLVLLTV----VYDGRV-VQRLDLSKTNPSVLTSDIT 416
+D + +L D+ G L +L + DG V ++ L + + + +T
Sbjct: 262 NRVDPNGSRYLLGDME------GRLFMLLLEKEEQMDGTVTLKDLRVELLGETSIAECLT 315
Query: 417 TIGNSLFFLGSRLGDSLLVQFTCGS---GTSMLSSGLKEEFGDIEADAPSTKRLRRSSSD 473
+ N + F+GSRLGDS LV+ S G+ +++ G I D R+
Sbjct: 316 YLDNGVVFVGSRLGDSQLVKLNVDSNEQGSYVVAMETFTNLGPI-VDMCVVDLERQGQGQ 374
Query: 474 ALQDMVNGEELSLYGSASNNTESAQKTFSFAVRDSLVNIGPLKDFSYGLRINADASATGI 533
+ T S A ++ G L+ G+ I+ AS
Sbjct: 375 LV------------------------TCSGAFKE-----GSLRIIRNGIGIHEHAS---- 401
Query: 534 SKQSNYELVELPGCKGIWTVYHKSSRGHNADSSRMAAYDDEYHAYLIISLEARTMVLETA 593
++LPG KG+W + +R E L++S +T VL
Sbjct: 402 --------IDLPGIKGLWPLRSDPNR--------------ETDDTLVLSFVGQTRVLMLN 439
Query: 594 DLLTEVTESVDYFVQGRTIAAGNLFGRRRVIQVFERGARIL 634
E TE + + +T GN+ +++IQ+ R++
Sbjct: 440 GEEVEETELMGFVDDQQTFFCGNV-AHQQLIQITSASVRLV 479
>sp|Q21554|DDB1_CAEEL DNA damage-binding protein 1 OS=Caenorhabditis elegans GN=ddb-1
PE=1 SV=2
Length = 1134
Score = 48.1 bits (113), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 100/396 (25%), Positives = 166/396 (41%), Gaps = 96/396 (24%)
Query: 307 DAYKLLAVPSPIGGVLVVGANTIHYHSQSASCALALNNYAVSLDSSQELPRSSFSVE--L 364
D+ L+ VP IGGV+V+G+N++ Y + Y SL L ++F+ +
Sbjct: 210 DSSVLIPVPHAIGGVIVLGSNSVLYKPNDNLGEVV--PYTCSL-----LENTTFTCHGIV 262
Query: 365 DAAHATWLQNDVALLSTKTGDLVLL----TVVYDGRVVQRLDLSKTNPSVLTSDITTIGN 420
DA+ +L LS G L++L T G V+ + + + + I I N
Sbjct: 263 DASGERFL------LSDTDGRLLMLLLNVTESQSGYTVKEMRIDYLGETSIADSINYIDN 316
Query: 421 SLFFLGSRLGDSLLVQF-TCGSGTSMLSSGLKEEFGDIEADAPSTKRLRRSSSDALQDMV 479
+ F+GSRLGDS L++ T +G S S + E + +I ++DMV
Sbjct: 317 GVVFVGSRLGDSQLIRLMTEPNGGSY--SVILETYSNI---------------GPIRDMV 359
Query: 480 NGEELSLYGSASNNTESAQKTFSFAVRDSLVNIGPLKDFSYGLRINADASATGISKQSNY 539
E ++ + T + A +D G L+ G+ I+ AS
Sbjct: 360 MVE---------SDGQPQLVTCTGADKD-----GSLRVIRNGIGIDELAS---------- 395
Query: 540 ELVELPGCKGIWTVYHKSSRGHNADSSRMAAYDDEYHAYLIISLEARTMVLETADLLTEV 599
V+L G GI+ + S NAD+ Y+I+SL T VL+ E
Sbjct: 396 --VDLAGVVGIFPIRLDS----NADN------------YVIVSLSDETHVLQITGEELED 437
Query: 600 TESVDYFVQGRTIAAGNLFGRRR---VIQVFERGARILDGSYMTQDLSFGPSNSESGSGS 656
+ ++ TI A LFG ++Q E+ R++ S +++ + P+N E S
Sbjct: 438 VKLLEINTDLPTIFASTLFGPNDSGIILQATEKQIRLMSSSGLSK--FWEPTNGEIISK- 494
Query: 657 ENSTVLSVSIADPYVLLGMSDGSIRLLVGDPSTCTV 692
+SV+ A+ ++L D ++ LL TC V
Sbjct: 495 -----VSVNAANGQIVLAARD-TVYLL-----TCIV 519
>sp|Q9ESW0|DDB1_RAT DNA damage-binding protein 1 OS=Rattus norvegicus GN=Ddb1 PE=2 SV=1
Length = 1140
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 94/461 (20%), Positives = 170/461 (36%), Gaps = 116/461 (25%)
Query: 185 VDPQGRCGGVLVYGLQMIILKASQGGSGLVGDEDTFGSGGGFSARIESSHVINLRDLDMK 244
+DP+ R G+ +Y ++ + L F+ R+E HVI+++
Sbjct: 124 IDPECRMIGLRLYDGLFKVIPLDRDNKEL----------KAFNIRLEELHVIDVK----- 168
Query: 245 HVKDFIFVHGYIEPVMVILHERELTWAGRVSWKHHTCMISALSISTTLKQHPLIWSAMNL 304
F++G P + +++ GR H + P W N+
Sbjct: 169 ------FLYGCQAPTICFVYQDP---QGR-----HVKTYEVSLREKEFNKGP--WKQENV 212
Query: 305 PHDAYKLLAVPSPIGGVLVVGANTIHYHSQSASCALALNNYAVSLDSSQELPRSSFSV-- 362
+A ++AVP P GG +++G +I YH+ A+A + + S V
Sbjct: 213 EAEASMVIAVPEPFGGAIIIGQESITYHNGDKYLAIA-----------PPIIKQSTIVCH 261
Query: 363 -ELDAAHATWLQNDVALLSTKTGDLVLLTV----VYDGRV-VQRLDLSKTNPSVLTSDIT 416
+D + +L D+ G L +L + DG V ++ L + + + +T
Sbjct: 262 NRVDPNGSRYLLGDME------GRLFMLLLEKEEQMDGTVTLKDLRVELLGETSIAECLT 315
Query: 417 TIGNSLFFLGSRLGDSLLVQFTCGS---GTSMLSSGLKEEFGDIEADAPSTKRLRRSSSD 473
+ N + F+GSRLGDS V+ S G+ +++ G I D R+
Sbjct: 316 YLDNGVVFVGSRLGDSQPVKLNVDSNEQGSYVVAMETFTNLGPI-VDMCVVDLERQGQGQ 374
Query: 474 ALQDMVNGEELSLYGSASNNTESAQKTFSFAVRDSLVNIGPLKDFSYGLRINADASATGI 533
+ T S A ++ G L+ G+ I+ AS
Sbjct: 375 LV------------------------TCSGAFKE-----GSLRIIRNGIGIHEHAS---- 401
Query: 534 SKQSNYELVELPGCKGIWTVYHKSSRGHNADSSRMAAYDDEYHAYLIISLEARTMVLETA 593
++LPG KG+W + +R E L++S +T VL
Sbjct: 402 --------IDLPGIKGLWPLRSDPNR--------------ETDDTLVLSFVGQTRVLMLN 439
Query: 594 DLLTEVTESVDYFVQGRTIAAGNLFGRRRVIQVFERGARIL 634
E TE + + +T GN+ +++IQ+ R++
Sbjct: 440 GEEVEETELMGFVDDQQTFFCGNV-AHQQLIQITSASVRLV 479
>sp|Q54SA7|SF3B3_DICDI Probable splicing factor 3B subunit 3 OS=Dictyostelium discoideum
GN=sf3b3 PE=3 SV=1
Length = 1256
Score = 43.9 bits (102), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 83/338 (24%), Positives = 124/338 (36%), Gaps = 75/338 (22%)
Query: 319 GGVLVVGANTIHYHSQSASCALALNNYAVSLDSSQELPRSSFSVE----LDAAHATWLQN 374
GGVLV + I Y +Q + + +PR S L +H++ Q
Sbjct: 256 GGVLVASEDYIVYRNQDHA------------EVRSRIPRRYGSDPNKGVLIISHSSHKQK 303
Query: 375 DVA--LLSTKTGDLVLLTVVYDGRVVQRLDLSKTNPSVLTSDITTIGNSLFFLGSRLGDS 432
+ L+ ++ GDL +T+ Y G V ++++ + VL + +T + N F S GD
Sbjct: 304 GMFFFLVQSEHGDLYKITLDYQGDQVSEVNVNYFDTIVLANCLTVLKNGFLFAASEFGDH 363
Query: 433 LLVQFTCGSGTSMLSSGLKEEFGDIEADAPSTKRL----RRSSSDALQDMVNGEELSLYG 488
L F S G +EE G + L R S ++++ N E S
Sbjct: 364 TLYFFK--------SIGDEEEEGQAKRLEDKDGHLWFTPRNSCGTKMEELKNLEPTSHLS 415
Query: 489 SASNNTESAQKTFSFAVRDSLVNIGP-------------LKDFSYGLRINADASATGISK 535
S S F V D + P LK +GL + +A
Sbjct: 416 SLS-------PIIDFKVLDLVREENPQLYSLCGTGLNSSLKVLRHGLSVTTITTAN---- 464
Query: 536 QSNYELVELPGC-KGIWTVYHKSSRGHNADSSRMAAYDDEYHAYLIISLEARTMVLETAD 594
LPG GIWTV +S NA D+ Y+++S T VL D
Sbjct: 465 --------LPGVPSGIWTVPKSTS--PNA--------IDQTDKYIVVSFVGTTSVLSVGD 506
Query: 595 LLTEVTESVDYFVQGRTIAAGNLFGRRRVIQVFERGAR 632
+ E ES ++ T G +IQVF G R
Sbjct: 507 TIQENHES--GILETTTTLLVKSMGDDAIIQVFPTGFR 542
>sp|Q52E49|RSE1_MAGO7 Pre-mRNA-splicing factor RSE1 OS=Magnaporthe oryzae (strain 70-15 /
ATCC MYA-4617 / FGSC 8958) GN=RSE1 PE=3 SV=2
Length = 1216
Score = 41.6 bits (96), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 62/280 (22%), Positives = 108/280 (38%), Gaps = 70/280 (25%)
Query: 378 LLSTKTGDLVLLTV--VYDGR-----VVQRLDLSKTNPSVLTSDITTIGNSLFFLGSRLG 430
LL T+ GDL +T+ V D V+RL + + +++++ + + F+ S G
Sbjct: 310 LLQTEDGDLFKVTIDMVEDAEGNPTGEVRRLKIKYFDTIPVSNNLCILKSGFLFVASEFG 369
Query: 431 DSLLVQFTCGSGTSMLSSGLKEEFGDIEADAPSTKRLRRSSSDALQDMVNG-EELSLYGS 489
+ L QF E+ GD + L SSD D E + Y
Sbjct: 370 NHLFYQF--------------EKLGD------DDEELEFFSSDFPVDPKEPYEPVYFYPR 409
Query: 490 ASNNTESAQKTFSFAVRDSLVNIGPLKDFSYGLRINADA----SATGISKQSNYELV--- 542
+ N A+ +S+ ++ PL D DA + +G +S + ++
Sbjct: 410 PTEN---------LALVESIDSMNPLMDLKVANLTEEDAPQIYTVSGKGARSTFRMLKHG 460
Query: 543 ---------ELPGC-KGIWTVYHKSSRGHNADSSRMAAYDDEYHAYLIISLEARTMVLET 592
+LPG +WT + DDEY AY+++S T+VL
Sbjct: 461 LEVNEIVASQLPGTPSAVWTTKLRR--------------DDEYDAYIVLSFTNGTLVLSI 506
Query: 593 ADLLTEVTESVDYFVQGRTIAAGNLFGRRRVIQVFERGAR 632
+ + EV+++ F+ A G ++QV +G R
Sbjct: 507 GETVEEVSDT--GFLSSVPTLAVQQLGDDGLVQVHPKGIR 544
>sp|B0M0P5|DDB1_DICDI DNA damage-binding protein 1 OS=Dictyostelium discoideum GN=repE
PE=1 SV=1
Length = 1181
Score = 40.4 bits (93), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 87/204 (42%), Gaps = 29/204 (14%)
Query: 234 HVINLRDLDMKHVKDFIFVHGYIEPVMVILHERELTWAGRVSWKHHTCMISALSISTTLK 293
+V N+R L+ V D F++G P + +L + + H S T L
Sbjct: 192 NVNNVR-LEELQVLDMTFLYGCKVPTIAVLFKD-------TKDEKHISTYEISSKDTELV 243
Query: 294 QHPLIWSAMNLPHDAYKLLAVPSPIGGVLVVGANTIHYHSQSASCALALNNYAVSLDSSQ 353
P WS N+ Y L VP P+GGVLVV N I Y + + ++A+ +Y L ++
Sbjct: 244 VGP--WSQSNV--GVYSSLLVPVPLGGVLVVADNGITYLNGKVTRSVAV-SYTKFLAFTR 298
Query: 354 ELPRSSFSVELDAAHATWLQNDVALLSTKTGDLVLLTVVYDGRVVQRLDLSKTNPSVLTS 413
V+ D + L G L +L +++ + V L + + S
Sbjct: 299 --------VDKDGSR--------FLFGDHFGRLSVLVLIHQQQKVMELKFEQLGRISIPS 342
Query: 414 DITTIGNSLFFLGSRLGDSLLVQF 437
I+ + + + ++GS GDS L++
Sbjct: 343 SISYLDSGVVYIGSSSGDSQLIRL 366
>sp|Q5RBI5|SF3B3_PONAB Splicing factor 3B subunit 3 OS=Pongo abelii GN=SF3B3 PE=2 SV=1
Length = 1217
Score = 38.9 bits (89), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 69/325 (21%), Positives = 119/325 (36%), Gaps = 69/325 (21%)
Query: 378 LLSTKTGDLVLLTVVYDGRVVQRLDLSKTNPSVLTSDITTIGNSLFFLGSRLGDSLLVQF 437
L T+ GD+ +T+ D +V + L + + + + + F+ S G+ L Q
Sbjct: 302 LAQTEQGDIFKITLETDEDMVTEIRLKYFDTVPVAAAMCVLKTGFLFVASEFGNHYLYQI 361
Query: 438 TC---GSGTSMLSSGLKEEFGD--IEADAPSTKRLRRSSSDALQ--------DMVNGEEL 484
SS + E GD P + D+L D+ N +
Sbjct: 362 AHLGDDDEEPEFSSAMPLEEGDTFFFQPRPLKNLVLVDELDSLSPILFCQIADLANEDTP 421
Query: 485 SLYGSASNNTESAQKTFSFAVRDSLVNIGPLKDFSYGLRINADASATGISKQSNYELVEL 544
LY + S+ L+ +GL + S T +S EL
Sbjct: 422 QLYVACGRGPRSS-----------------LRVLRHGLEV----SETAVS--------EL 452
Query: 545 PG-CKGIWTVYHKSSRGHNADSSRMAAYDDEYHAYLIISLEARTMVLETADLLTEVTESV 603
PG +WTV R H +DE+ AY+I+S T+VL + + EVT+S
Sbjct: 453 PGNPNAVWTV-----RRH---------IEDEFDAYIIVSFVNATLVLSIGETVEEVTDS- 497
Query: 604 DYFVQGRTIAAGNLFGRRRVIQVFERGARILDGSYMTQDLSFGPSNSESGSGSENSTVLS 663
F+ + +L G ++QV+ G R + N G + T++
Sbjct: 498 -GFLGTTPTLSCSLLGDDALVQVYPDGIRHIRADKRV--------NEWKTPGKK--TIVK 546
Query: 664 VSIADPYVLLGMSDGSIRLLVGDPS 688
++ V++ ++ G + DPS
Sbjct: 547 CAVNQRQVVIALTGGELVYFEMDPS 571
>sp|Q1LVE8|SF3B3_DANRE Splicing factor 3B subunit 3 OS=Danio rerio GN=sf3b3 PE=2 SV=1
Length = 1217
Score = 38.5 bits (88), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 66/325 (20%), Positives = 116/325 (35%), Gaps = 69/325 (21%)
Query: 378 LLSTKTGDLVLLTVVYDGRVVQRLDLSKTNPSVLTSDITTIGNSLFFLGSRLGDSLLVQF 437
L T+ GD+ +T+ D +V + + + + + + + F+ S G+ L Q
Sbjct: 302 LAQTEQGDIFKVTLETDEEMVTEIRMKYFDTIPVATAMCVLKTGFLFVSSEFGNHYLYQI 361
Query: 438 TC---GSGTSMLSSGLKEEFGDIEADAP----------STKRLRRSSSDALQDMVNGEEL 484
SS + E GD P + L S + D+ N +
Sbjct: 362 AHLGDDDEEPEFSSAMPLEEGDTFFFQPRPLKNLVLVDEQESLSPIMSCQIADLANEDTP 421
Query: 485 SLYGSASNNTESAQKTFSFAVRDSLVNIGPLKDFSYGLRINADASATGISKQSNYELVEL 544
LY + S L+ +GL + S + EL
Sbjct: 422 QLYVACGRGPRST-----------------LRVLRHGLEV------------SEMAVSEL 452
Query: 545 PG-CKGIWTVYHKSSRGHNADSSRMAAYDDEYHAYLIISLEARTMVLETADLLTEVTESV 603
PG +WTV R H +DE+ AY+I+S T+VL + + EVT+S
Sbjct: 453 PGNPNAVWTV-----RRH---------VEDEFDAYIIVSFVNATLVLSIGETVEEVTDS- 497
Query: 604 DYFVQGRTIAAGNLFGRRRVIQVFERGARILDGSYMTQDLSFGPSNSESGSGSENSTVLS 663
F+ + +L G ++QV+ G R + N G + T++
Sbjct: 498 -GFLGTTPTLSCSLLGEDALVQVYPDGIRHIRADKRV--------NEWKTPGKK--TIIR 546
Query: 664 VSIADPYVLLGMSDGSIRLLVGDPS 688
++ V++ ++ G + DPS
Sbjct: 547 CAVNQRQVVIALTGGELVYFEMDPS 571
>sp|Q9UTT2|RSE1_SCHPO Pre-mRNA-splicing factor prp12 OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=prp12 PE=1 SV=1
Length = 1206
Score = 38.5 bits (88), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 70/316 (22%), Positives = 124/316 (39%), Gaps = 60/316 (18%)
Query: 378 LLSTKTGDLVLLTVVYDGR---VVQRLDLSKTNPSVLTSDITTIGNSLFFLGSRLGDSLL 434
LL T GDL+ LT+ +DG+ V RL T P + +I G F+ + G+ L
Sbjct: 320 LLQTGDGDLLKLTIEHDGQGNVVELRLKYFDTVPLAVQLNILKTG--FLFVATEFGNHQL 377
Query: 435 VQF-TCGSGTSMLS-SGLKEEFGDIEADAPSTKRLRRSSSDALQDMVNGEEL-SLYG--- 488
QF G L + L + D E + R LQ++ EE+ SLY
Sbjct: 378 YQFENLGIDDDELEITSLDFQAQDNEVGTKNVHFGVR----GLQNLSLVEEIPSLYSLTD 433
Query: 489 ---SASNNTESAQKTFSFAVRDSLVNIGPLKDFSYGLRINADASATGISKQSNYELVELP 545
+ ++ A + ++ R S L+ GL ++ ELP
Sbjct: 434 TLLMKAPSSGEANQLYTVCGRGS---NSSLRQLRRGLETTEIVAS------------ELP 478
Query: 546 GCK-GIWTVYHKSSRGHNADSSRMAAYDDEYHAYLIISLEARTMVLETADLLTEVTESVD 604
G IWT+ + D Y +Y+I+S T+VL + + E+++S
Sbjct: 479 GAPIAIWTLKLNQT--------------DVYDSYIILSFTNGTLVLSIGETVEEISDSG- 523
Query: 605 YFVQGRTIAAGNLFGRRRVIQVFERGARILDGSYMTQDLSFGPSNSESGSGSENSTVLSV 664
F+ + GR ++Q+ +G R + + T + ++ V+
Sbjct: 524 -FLSSVSTLNARQMGRDSLVQIHPKGIRYIRANKQTSEWKL----------PQDVYVVQS 572
Query: 665 SIADPYVLLGMSDGSI 680
+I D +++ +S+G +
Sbjct: 573 AINDMQIVVALSNGEL 588
>sp|Q921M3|SF3B3_MOUSE Splicing factor 3B subunit 3 OS=Mus musculus GN=Sf3b3 PE=2 SV=1
Length = 1217
Score = 37.7 bits (86), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 67/325 (20%), Positives = 117/325 (36%), Gaps = 69/325 (21%)
Query: 378 LLSTKTGDLVLLTVVYDGRVVQRLDLSKTNPSVLTSDITTIGNSLFFLGSRLGDSLLVQF 437
L T+ GD+ +T+ D +V + L + + + + + F+ S G+ L Q
Sbjct: 302 LAQTEQGDIFKITLETDEDMVTEIRLKYFDTVPVAAAMCVLKTGFLFVASEFGNHYLYQI 361
Query: 438 TC---GSGTSMLSSGLKEEFGD--IEADAPSTKRLRRSSSDALQ--------DMVNGEEL 484
SS + E GD P + D+L D+ N +
Sbjct: 362 AHLGDDDEEPEFSSAMPLEEGDTFFFQPRPLKNLVLVDELDSLSPILFCQIADLANEDTP 421
Query: 485 SLYGSASNNTESAQKTFSFAVRDSLVNIGPLKDFSYGLRINADASATGISKQSNYELVEL 544
LY + S+ L+ +GL + S + EL
Sbjct: 422 QLYVACGRGPRSS-----------------LRVLRHGLEV------------SEMAVSEL 452
Query: 545 PGC-KGIWTVYHKSSRGHNADSSRMAAYDDEYHAYLIISLEARTMVLETADLLTEVTESV 603
PG +WTV R H +DE+ AY+I+S T+VL + + EVT+S
Sbjct: 453 PGNPNAVWTV-----RRH---------IEDEFDAYIIVSFVNATLVLSIGETVEEVTDS- 497
Query: 604 DYFVQGRTIAAGNLFGRRRVIQVFERGARILDGSYMTQDLSFGPSNSESGSGSENSTVLS 663
F+ + +L G ++QV+ G R + N G + T++
Sbjct: 498 -GFLGTTPTLSCSLLGDDALVQVYPDGIRHIRADKRV--------NEWKTPGKK--TIVK 546
Query: 664 VSIADPYVLLGMSDGSIRLLVGDPS 688
++ V++ ++ G + DPS
Sbjct: 547 CAVNQRQVVIALTGGELVYFEMDPS 571
>sp|Q15393|SF3B3_HUMAN Splicing factor 3B subunit 3 OS=Homo sapiens GN=SF3B3 PE=1 SV=4
Length = 1217
Score = 37.7 bits (86), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 67/325 (20%), Positives = 117/325 (36%), Gaps = 69/325 (21%)
Query: 378 LLSTKTGDLVLLTVVYDGRVVQRLDLSKTNPSVLTSDITTIGNSLFFLGSRLGDSLLVQF 437
L T+ GD+ +T+ D +V + L + + + + + F+ S G+ L Q
Sbjct: 302 LAQTEQGDIFKITLETDEDMVTEIRLKYFDTVPVAAAMCVLKTGFLFVASEFGNHYLYQI 361
Query: 438 TC---GSGTSMLSSGLKEEFGD--IEADAPSTKRLRRSSSDALQ--------DMVNGEEL 484
SS + E GD P + D+L D+ N +
Sbjct: 362 AHLGDDDEEPEFSSAMPLEEGDTFFFQPRPLKNLVLVDELDSLSPILFCQIADLANEDTP 421
Query: 485 SLYGSASNNTESAQKTFSFAVRDSLVNIGPLKDFSYGLRINADASATGISKQSNYELVEL 544
LY + S+ L+ +GL + S + EL
Sbjct: 422 QLYVACGRGPRSS-----------------LRVLRHGLEV------------SEMAVSEL 452
Query: 545 PGC-KGIWTVYHKSSRGHNADSSRMAAYDDEYHAYLIISLEARTMVLETADLLTEVTESV 603
PG +WTV R H +DE+ AY+I+S T+VL + + EVT+S
Sbjct: 453 PGNPNAVWTV-----RRH---------IEDEFDAYIIVSFVNATLVLSIGETVEEVTDS- 497
Query: 604 DYFVQGRTIAAGNLFGRRRVIQVFERGARILDGSYMTQDLSFGPSNSESGSGSENSTVLS 663
F+ + +L G ++QV+ G R + N G + T++
Sbjct: 498 -GFLGTTPTLSCSLLGDDALVQVYPDGIRHIRADKRV--------NEWKTPGKK--TIVK 546
Query: 664 VSIADPYVLLGMSDGSIRLLVGDPS 688
++ V++ ++ G + DPS
Sbjct: 547 CAVNQRQVVIALTGGELVYFEMDPS 571
>sp|A0JN52|SF3B3_BOVIN Splicing factor 3B subunit 3 OS=Bos taurus GN=SF3B3 PE=2 SV=1
Length = 1217
Score = 37.7 bits (86), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 67/325 (20%), Positives = 117/325 (36%), Gaps = 69/325 (21%)
Query: 378 LLSTKTGDLVLLTVVYDGRVVQRLDLSKTNPSVLTSDITTIGNSLFFLGSRLGDSLLVQF 437
L T+ GD+ +T+ D +V + L + + + + + F+ S G+ L Q
Sbjct: 302 LAQTEQGDIFKITLETDEDMVTEIRLKYFDTVPVAAAMCVLKTGFLFVASEFGNHYLYQI 361
Query: 438 TC---GSGTSMLSSGLKEEFGD--IEADAPSTKRLRRSSSDALQ--------DMVNGEEL 484
SS + E GD P + D+L D+ N +
Sbjct: 362 AHLGDDDEEPEFSSAMPLEEGDTFFFQPRPLKNLVLVDELDSLSPILFCQIADLANEDTP 421
Query: 485 SLYGSASNNTESAQKTFSFAVRDSLVNIGPLKDFSYGLRINADASATGISKQSNYELVEL 544
LY + S+ L+ +GL + S + EL
Sbjct: 422 QLYVACGRGPRSS-----------------LRVLRHGLEV------------SEMAVSEL 452
Query: 545 PGC-KGIWTVYHKSSRGHNADSSRMAAYDDEYHAYLIISLEARTMVLETADLLTEVTESV 603
PG +WTV R H +DE+ AY+I+S T+VL + + EVT+S
Sbjct: 453 PGNPNAVWTV-----RRH---------IEDEFDAYIIVSFVNATLVLSIGETVEEVTDS- 497
Query: 604 DYFVQGRTIAAGNLFGRRRVIQVFERGARILDGSYMTQDLSFGPSNSESGSGSENSTVLS 663
F+ + +L G ++QV+ G R + N G + T++
Sbjct: 498 -GFLGTTPTLSCSLLGDDALVQVYPDGIRHIRADKRV--------NEWKTPGKK--TIVK 546
Query: 664 VSIADPYVLLGMSDGSIRLLVGDPS 688
++ V++ ++ G + DPS
Sbjct: 547 CAVNQRQVVIALTGGELVYFEMDPS 571
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.134 0.394
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 434,611,850
Number of Sequences: 539616
Number of extensions: 18634129
Number of successful extensions: 42669
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 39
Number of HSP's successfully gapped in prelim test: 34
Number of HSP's that attempted gapping in prelim test: 42374
Number of HSP's gapped (non-prelim): 181
length of query: 1192
length of database: 191,569,459
effective HSP length: 129
effective length of query: 1063
effective length of database: 121,958,995
effective search space: 129642411685
effective search space used: 129642411685
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 67 (30.4 bits)