Query 001008
Match_columns 1191
No_of_seqs 413 out of 3156
Neff 8.7
Searched_HMMs 46136
Date Thu Mar 28 13:13:55 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/001008.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/001008hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0206 P-type ATPase [General 100.0 5E-197 1E-201 1790.8 67.7 1087 34-1163 11-1099(1151)
2 PLN03190 aminophospholipid tra 100.0 3E-181 6E-186 1720.8 111.1 1087 35-1172 68-1176(1178)
3 TIGR01652 ATPase-Plipid phosph 100.0 2E-169 5E-174 1635.7 110.5 1050 55-1151 1-1057(1057)
4 KOG0210 P-type ATPase [Inorgan 100.0 2E-154 5E-159 1283.6 69.5 980 38-1150 64-1050(1051)
5 KOG0202 Ca2+ transporting ATPa 100.0 6E-116 1E-120 1006.5 49.7 891 47-1142 28-970 (972)
6 COG0474 MgtA Cation transport 100.0 4E-114 9E-119 1093.2 69.1 826 48-1125 50-899 (917)
7 TIGR01523 ATPase-IID_K-Na pota 100.0 3E-110 7E-115 1066.3 78.7 910 47-1142 31-1049(1053)
8 KOG0204 Calcium transporting A 100.0 3E-111 7E-116 965.0 46.2 848 47-1140 124-1008(1034)
9 TIGR01106 ATPase-IIC_X-K sodiu 100.0 9E-108 2E-112 1049.3 75.6 877 47-1141 41-986 (997)
10 TIGR01116 ATPase-IIA1_Ca sarco 100.0 2E-106 5E-111 1030.3 78.5 866 75-1139 1-917 (917)
11 TIGR01517 ATPase-IIB_Ca plasma 100.0 2E-106 4E-111 1035.3 72.1 836 47-1137 65-938 (941)
12 TIGR01522 ATPase-IIA2_Ca golgi 100.0 7E-102 1E-106 987.5 77.6 826 47-1141 29-883 (884)
13 TIGR01657 P-ATPase-V P-type AT 100.0 3.6E-99 8E-104 976.3 78.2 848 49-1089 146-1024(1054)
14 PRK15122 magnesium-transportin 100.0 3.4E-99 7E-104 955.8 72.6 809 47-1139 50-896 (903)
15 PRK10517 magnesium-transportin 100.0 4.8E-98 1E-102 943.3 72.1 800 47-1141 72-899 (902)
16 TIGR01524 ATPase-IIIB_Mg magne 100.0 6.6E-97 1E-101 934.8 74.6 793 47-1136 38-858 (867)
17 TIGR01647 ATPase-IIIA_H plasma 100.0 1.1E-92 2.3E-97 885.9 70.2 705 48-1064 7-722 (755)
18 KOG0208 Cation transport ATPas 100.0 7.8E-89 1.7E-93 791.9 57.9 814 49-1029 167-1006(1140)
19 KOG0203 Na+/K+ ATPase, alpha s 100.0 1.7E-91 3.7E-96 802.0 32.6 880 49-1144 65-1011(1019)
20 PRK14010 potassium-transportin 100.0 1.7E-75 3.7E-80 704.2 53.3 583 77-988 28-644 (673)
21 PRK01122 potassium-transportin 100.0 1.6E-74 3.4E-79 696.5 56.8 592 76-993 28-654 (679)
22 TIGR01497 kdpB K+-transporting 100.0 3E-71 6.5E-76 666.1 53.8 589 76-988 27-649 (675)
23 KOG0209 P-type ATPase [Inorgan 100.0 4.2E-70 9.2E-75 620.5 46.8 766 52-1028 173-1031(1160)
24 KOG0205 Plasma membrane H+-tra 100.0 2.4E-71 5.2E-76 616.7 20.8 606 47-936 41-661 (942)
25 TIGR01494 ATPase_P-type ATPase 100.0 1.3E-65 2.7E-70 621.3 50.7 474 107-941 4-483 (499)
26 COG2217 ZntA Cation transport 100.0 9.5E-64 2.1E-68 601.9 48.4 492 112-942 179-682 (713)
27 PRK11033 zntA zinc/cadmium/mer 100.0 4E-60 8.7E-65 590.5 51.8 485 113-940 212-709 (741)
28 KOG0207 Cation transport ATPas 100.0 4.3E-60 9.3E-65 553.7 38.4 501 118-939 352-865 (951)
29 TIGR01525 ATPase-IB_hvy heavy 100.0 8.1E-59 1.8E-63 566.6 48.0 501 104-940 18-528 (556)
30 TIGR01512 ATPase-IB2_Cd heavy 100.0 2.4E-57 5.3E-62 549.8 47.9 481 104-940 18-507 (536)
31 TIGR01511 ATPase-IB1_Cu copper 100.0 4E-57 8.6E-62 549.4 46.0 472 118-940 65-547 (562)
32 PRK10671 copA copper exporting 100.0 4.3E-55 9.2E-60 557.4 51.5 488 114-939 293-792 (834)
33 COG2216 KdpB High-affinity K+ 100.0 2.6E-50 5.6E-55 440.3 35.4 559 108-988 70-650 (681)
34 PF00122 E1-E2_ATPase: E1-E2 A 100.0 3.2E-29 6.9E-34 273.6 22.2 222 110-416 2-230 (230)
35 PF00702 Hydrolase: haloacid d 99.8 1.2E-20 2.6E-25 204.0 13.4 97 698-879 115-215 (215)
36 PF13246 Hydrolase_like2: Puta 99.5 1.8E-14 3.9E-19 130.8 6.0 90 523-630 1-90 (91)
37 COG4087 Soluble P-type ATPase 99.5 3.8E-13 8.2E-18 123.0 10.8 126 699-910 19-146 (152)
38 KOG4383 Uncharacterized conser 99.3 1.7E-08 3.6E-13 115.3 37.7 285 694-991 810-1153(1354)
39 PF00689 Cation_ATPase_C: Cati 99.2 5.3E-11 1.1E-15 124.8 13.0 173 952-1137 2-182 (182)
40 COG0560 SerB Phosphoserine pho 98.7 2.3E-07 5.1E-12 98.6 14.7 120 709-900 76-199 (212)
41 PRK10513 sugar phosphate phosp 98.7 4.9E-08 1.1E-12 109.4 9.7 60 842-902 189-254 (270)
42 COG0561 Cof Predicted hydrolas 98.6 2.2E-07 4.9E-12 103.7 12.4 55 847-902 189-247 (264)
43 TIGR02137 HSK-PSP phosphoserin 98.6 2.6E-07 5.6E-12 97.8 10.5 126 710-909 68-194 (203)
44 PRK15126 thiamin pyrimidine py 98.5 1E-07 2.3E-12 106.8 6.7 57 841-898 180-242 (272)
45 PRK11133 serB phosphoserine ph 98.5 2.6E-07 5.7E-12 104.5 9.7 127 710-909 181-311 (322)
46 TIGR01482 SPP-subfamily Sucros 98.4 6.2E-07 1.3E-11 97.6 9.6 181 710-902 15-207 (225)
47 PRK01158 phosphoglycolate phos 98.4 6.5E-07 1.4E-11 97.7 9.6 181 711-902 21-215 (230)
48 PRK10976 putative hydrolase; P 98.4 3.3E-07 7.1E-12 102.5 6.7 61 841-902 182-250 (266)
49 PLN02887 hydrolase family prot 98.4 3.3E-07 7.1E-12 110.9 6.6 55 847-902 507-565 (580)
50 PF08282 Hydrolase_3: haloacid 98.4 6.4E-07 1.4E-11 99.1 7.6 56 846-902 185-244 (254)
51 TIGR01487 SPP-like sucrose-pho 98.3 1.6E-06 3.5E-11 93.5 8.7 177 710-902 18-205 (215)
52 TIGR00338 serB phosphoserine p 98.3 3.1E-06 6.7E-11 91.6 10.2 122 710-904 85-211 (219)
53 PRK03669 mannosyl-3-phosphogly 98.2 5.7E-06 1.2E-10 92.6 10.8 39 711-749 25-63 (271)
54 PRK10530 pyridoxal phosphate ( 98.2 3.6E-06 7.8E-11 94.5 8.6 56 846-902 198-257 (272)
55 TIGR01486 HAD-SF-IIB-MPGP mann 98.2 1.1E-05 2.3E-10 89.6 11.5 39 711-749 17-55 (256)
56 TIGR01670 YrbI-phosphatas 3-de 98.1 1.4E-05 3E-10 81.0 9.2 95 718-902 36-134 (154)
57 KOG1615 Phosphoserine phosphat 98.1 5.5E-06 1.2E-10 82.3 5.9 128 710-905 88-220 (227)
58 TIGR00099 Cof-subfamily Cof su 98.0 6.7E-06 1.5E-10 91.3 6.5 60 842-902 181-246 (256)
59 PF12710 HAD: haloacid dehalog 98.0 2E-05 4.3E-10 83.3 9.3 39 713-751 92-130 (192)
60 PRK13582 thrH phosphoserine ph 98.0 3.3E-05 7.1E-10 82.7 10.9 126 710-909 68-194 (205)
61 TIGR02726 phenyl_P_delta pheny 98.0 2.2E-05 4.7E-10 80.3 8.8 98 717-902 41-140 (169)
62 TIGR01485 SPP_plant-cyano sucr 98.0 3.4E-05 7.5E-10 85.2 10.3 179 708-888 19-213 (249)
63 PRK09484 3-deoxy-D-manno-octul 97.9 2.8E-05 6E-10 81.3 8.3 110 717-916 55-175 (183)
64 TIGR02471 sucr_syn_bact_C sucr 97.9 6.4E-05 1.4E-09 82.3 11.3 54 843-897 153-212 (236)
65 TIGR01491 HAD-SF-IB-PSPlk HAD- 97.9 4.8E-05 1E-09 81.0 10.0 117 710-897 80-200 (201)
66 PRK08238 hypothetical protein; 97.9 0.0026 5.7E-08 76.1 25.0 40 710-749 72-111 (479)
67 TIGR02461 osmo_MPG_phos mannos 97.8 3.5E-05 7.6E-10 83.4 7.7 43 708-750 13-55 (225)
68 PRK00192 mannosyl-3-phosphogly 97.8 9.2E-05 2E-09 83.0 10.5 50 698-750 12-61 (273)
69 TIGR02463 MPGP_rel mannosyl-3- 97.8 0.00014 3.1E-09 78.7 11.2 36 715-750 21-56 (221)
70 PRK10187 trehalose-6-phosphate 97.7 0.00037 8.1E-09 77.4 14.2 182 710-906 36-236 (266)
71 PRK14502 bifunctional mannosyl 97.7 0.00023 4.9E-09 86.2 13.1 39 711-749 434-472 (694)
72 PLN02954 phosphoserine phospha 97.7 0.00015 3.2E-09 78.8 10.7 41 710-750 84-124 (224)
73 TIGR03333 salvage_mtnX 2-hydro 97.7 0.00014 3E-09 78.3 10.3 138 709-910 69-208 (214)
74 PRK12702 mannosyl-3-phosphogly 97.6 0.00046 1E-08 75.3 12.0 41 710-750 18-58 (302)
75 TIGR01484 HAD-SF-IIB HAD-super 97.6 0.00028 6.1E-09 75.4 10.3 48 710-757 17-66 (204)
76 TIGR01490 HAD-SF-IB-hyp1 HAD-s 97.6 0.00026 5.7E-09 75.5 9.4 111 708-887 85-199 (202)
77 PLN02382 probable sucrose-phos 97.5 0.00056 1.2E-08 80.7 11.8 176 716-895 34-230 (413)
78 cd01427 HAD_like Haloacid deha 97.5 0.00031 6.7E-09 69.1 7.8 44 707-750 21-64 (139)
79 TIGR01488 HAD-SF-IB Haloacid D 97.5 0.00034 7.3E-09 72.8 8.2 40 711-750 74-113 (177)
80 PRK09552 mtnX 2-hydroxy-3-keto 97.4 0.00049 1.1E-08 74.4 9.6 38 710-747 74-111 (219)
81 COG1778 Low specificity phosph 97.4 0.00033 7.2E-09 67.7 7.0 96 717-902 42-141 (170)
82 TIGR01489 DKMTPPase-SF 2,3-dik 97.4 0.00059 1.3E-08 71.7 9.0 42 709-750 71-112 (188)
83 PTZ00174 phosphomannomutase; P 97.4 0.00076 1.6E-08 74.3 9.9 44 846-889 187-235 (247)
84 PRK13222 phosphoglycolate phos 97.3 0.0013 2.9E-08 71.4 10.6 42 709-750 92-133 (226)
85 PRK14501 putative bifunctional 97.3 0.0035 7.5E-08 80.2 15.8 186 711-909 515-719 (726)
86 TIGR01454 AHBA_synth_RP 3-amin 97.2 0.0018 3.9E-08 69.2 9.8 41 710-750 75-115 (205)
87 TIGR01449 PGP_bact 2-phosphogl 97.0 0.0025 5.3E-08 68.6 9.5 41 710-750 85-125 (213)
88 COG0546 Gph Predicted phosphat 96.9 0.0054 1.2E-07 66.3 10.3 126 708-909 87-216 (220)
89 PRK13223 phosphoglycolate phos 96.9 0.0046 1E-07 69.1 9.9 41 709-749 100-140 (272)
90 TIGR01545 YfhB_g-proteo haloac 96.7 0.0078 1.7E-07 64.3 10.2 109 710-888 94-204 (210)
91 PRK13226 phosphoglycolate phos 96.6 0.0086 1.9E-07 65.2 9.7 41 710-750 95-135 (229)
92 PLN02580 trehalose-phosphatase 96.5 0.078 1.7E-06 61.1 16.9 65 842-909 293-372 (384)
93 PLN03243 haloacid dehalogenase 96.5 0.013 2.9E-07 64.8 10.1 41 710-750 109-149 (260)
94 PRK13288 pyrophosphatase PpaX; 96.4 0.012 2.6E-07 63.3 9.3 41 710-750 82-122 (214)
95 smart00831 Cation_ATPase_N Cat 96.4 0.0024 5.3E-08 53.9 3.0 46 48-96 16-61 (64)
96 PRK11590 hypothetical protein; 96.4 0.016 3.4E-07 62.2 9.9 109 710-888 95-205 (211)
97 PRK13225 phosphoglycolate phos 96.4 0.017 3.8E-07 64.3 10.5 41 710-750 142-182 (273)
98 PRK10826 2-deoxyglucose-6-phos 96.4 0.012 2.7E-07 63.6 9.2 42 709-750 91-132 (222)
99 TIGR01544 HAD-SF-IE haloacid d 96.4 0.014 3.1E-07 64.1 9.2 47 710-756 121-167 (277)
100 TIGR00685 T6PP trehalose-phosp 96.3 0.059 1.3E-06 59.2 14.2 65 842-909 162-238 (244)
101 PF00690 Cation_ATPase_N: Cati 96.2 0.0021 4.5E-08 55.2 1.4 45 47-94 25-69 (69)
102 PF05116 S6PP: Sucrose-6F-phos 96.2 0.015 3.2E-07 64.0 8.4 166 719-889 28-211 (247)
103 PLN02423 phosphomannomutase 96.2 0.018 3.9E-07 63.3 8.9 42 847-889 189-235 (245)
104 COG4030 Uncharacterized protei 96.0 0.028 6E-07 57.7 8.7 158 710-902 83-251 (315)
105 PLN02205 alpha,alpha-trehalose 96.0 0.23 5E-06 63.9 19.2 202 697-909 603-840 (854)
106 PRK11587 putative phosphatase; 96.0 0.031 6.8E-07 60.3 9.6 40 710-749 83-122 (218)
107 TIGR03351 PhnX-like phosphonat 95.9 0.03 6.6E-07 60.5 9.4 42 709-750 86-127 (220)
108 PLN02575 haloacid dehalogenase 95.7 0.059 1.3E-06 62.2 10.5 41 710-750 216-256 (381)
109 TIGR01422 phosphonatase phosph 95.6 0.054 1.2E-06 60.0 9.6 41 710-750 99-139 (253)
110 PRK06698 bifunctional 5'-methy 95.3 0.08 1.7E-06 64.1 10.7 41 710-750 330-370 (459)
111 TIGR01672 AphA HAD superfamily 95.3 0.031 6.7E-07 60.5 6.4 41 710-750 114-158 (237)
112 PRK06769 hypothetical protein; 95.3 0.12 2.7E-06 53.3 10.7 41 697-737 11-55 (173)
113 TIGR01548 HAD-SF-IA-hyp1 haloa 95.3 0.059 1.3E-06 57.1 8.4 43 708-750 104-146 (197)
114 smart00775 LNS2 LNS2 domain. T 95.2 0.11 2.3E-06 52.8 9.4 34 708-741 25-58 (157)
115 PLN03017 trehalose-phosphatase 95.1 0.9 2E-05 52.1 17.6 204 697-909 118-354 (366)
116 PRK13478 phosphonoacetaldehyde 95.1 0.14 3E-06 57.2 10.9 40 710-749 101-140 (267)
117 TIGR02253 CTE7 HAD superfamily 95.0 0.13 2.8E-06 55.5 10.2 40 710-749 94-133 (221)
118 PLN02779 haloacid dehalogenase 94.9 0.11 2.3E-06 58.6 9.5 38 710-747 144-181 (286)
119 PRK11009 aphA acid phosphatase 94.9 0.057 1.2E-06 58.4 6.8 40 710-749 114-157 (237)
120 PLN02770 haloacid dehalogenase 94.7 0.13 2.9E-06 56.6 9.4 41 710-750 108-148 (248)
121 TIGR01662 HAD-SF-IIIA HAD-supe 94.7 0.12 2.6E-06 50.7 8.0 41 709-749 24-72 (132)
122 PHA02530 pseT polynucleotide k 94.5 0.071 1.5E-06 60.7 7.0 44 707-750 184-227 (300)
123 PRK08942 D,D-heptose 1,7-bisph 94.5 0.2 4.4E-06 52.2 9.7 51 859-909 120-175 (181)
124 PLN02940 riboflavin kinase 94.2 0.16 3.4E-06 59.7 8.9 40 710-749 93-133 (382)
125 PRK09449 dUMP phosphatase; Pro 94.1 0.33 7.1E-06 52.5 10.7 39 710-749 95-133 (224)
126 TIGR01428 HAD_type_II 2-haloal 94.0 0.18 3.9E-06 53.4 8.2 40 710-749 92-131 (198)
127 COG3769 Predicted hydrolase (H 93.8 1.1 2.3E-05 46.5 12.6 37 714-750 27-63 (274)
128 PRK14988 GMP/IMP nucleotidase; 93.6 0.34 7.4E-06 52.5 9.6 41 710-750 93-133 (224)
129 TIGR02254 YjjG/YfnB HAD superf 93.5 0.37 8E-06 52.0 9.9 40 710-750 97-136 (224)
130 TIGR01990 bPGM beta-phosphoglu 93.5 0.15 3.3E-06 53.2 6.5 38 710-749 87-124 (185)
131 PF13419 HAD_2: Haloacid dehal 93.3 0.25 5.4E-06 50.6 7.8 43 708-750 75-117 (176)
132 TIGR01685 MDP-1 magnesium-depe 93.3 0.38 8.2E-06 49.5 8.7 52 698-749 33-85 (174)
133 PLN02811 hydrolase 93.2 0.31 6.6E-06 52.7 8.5 30 710-739 78-107 (220)
134 TIGR01509 HAD-SF-IA-v3 haloaci 93.2 0.31 6.8E-06 50.6 8.3 40 710-750 85-124 (183)
135 COG4359 Uncharacterized conser 93.2 0.29 6.4E-06 49.0 7.3 38 846-883 146-183 (220)
136 PLN02151 trehalose-phosphatase 93.0 2.3 5E-05 48.7 15.3 233 664-909 71-340 (354)
137 TIGR02009 PGMB-YQAB-SF beta-ph 93.0 0.21 4.5E-06 52.2 6.6 39 709-749 87-125 (185)
138 TIGR01668 YqeG_hyp_ppase HAD s 91.7 0.51 1.1E-05 48.6 7.4 40 710-749 43-83 (170)
139 TIGR01549 HAD-SF-IA-v1 haloaci 91.6 0.55 1.2E-05 47.3 7.6 40 708-747 62-101 (154)
140 smart00577 CPDc catalytic doma 91.2 0.27 5.8E-06 49.4 4.7 42 707-749 42-83 (148)
141 TIGR01681 HAD-SF-IIIC HAD-supe 91.1 0.6 1.3E-05 45.5 6.9 39 710-748 29-68 (128)
142 TIGR00213 GmhB_yaeD D,D-heptos 90.7 1.4 3.1E-05 45.5 9.7 47 860-906 124-174 (176)
143 TIGR02252 DREG-2 REG-2-like, H 90.6 0.81 1.8E-05 48.5 8.0 39 710-749 105-143 (203)
144 TIGR01533 lipo_e_P4 5'-nucleot 89.6 1.5 3.2E-05 48.5 9.0 42 708-749 116-160 (266)
145 PF06888 Put_Phosphatase: Puta 89.4 1.4 3.1E-05 47.5 8.6 41 710-750 71-113 (234)
146 TIGR01656 Histidinol-ppas hist 89.3 0.78 1.7E-05 46.0 6.1 27 710-736 27-53 (147)
147 PF02358 Trehalose_PPase: Treh 88.3 2 4.3E-05 46.9 9.0 186 710-901 19-232 (235)
148 TIGR01261 hisB_Nterm histidino 87.8 1.4 3.1E-05 44.8 7.0 26 710-735 29-54 (161)
149 TIGR02247 HAD-1A3-hyp Epoxide 86.7 1.2 2.6E-05 47.7 6.0 29 710-738 94-122 (211)
150 PRK05446 imidazole glycerol-ph 85.4 2.8 6E-05 48.3 8.3 26 709-734 29-54 (354)
151 PLN02177 glycerol-3-phosphate 85.2 7.6 0.00016 47.1 12.3 77 845-929 174-250 (497)
152 PLN02919 haloacid dehalogenase 84.5 4.3 9.3E-05 54.2 10.7 41 710-750 161-201 (1057)
153 TIGR01664 DNA-3'-Pase DNA 3'-p 84.4 3.5 7.7E-05 42.2 7.8 27 711-737 43-69 (166)
154 TIGR01691 enolase-ppase 2,3-di 83.5 4 8.7E-05 43.9 8.1 39 708-746 93-131 (220)
155 PRK10563 6-phosphogluconate ph 82.8 2.5 5.5E-05 45.5 6.4 37 710-749 88-124 (221)
156 PRK09456 ?-D-glucose-1-phospha 82.3 2.8 6E-05 44.4 6.3 30 710-739 84-113 (199)
157 TIGR01675 plant-AP plant acid 82.2 4.4 9.6E-05 43.5 7.7 30 710-739 120-149 (229)
158 PF13344 Hydrolase_6: Haloacid 82.2 1.4 3.1E-05 40.9 3.6 47 703-749 7-56 (101)
159 TIGR01459 HAD-SF-IIA-hyp4 HAD- 82.0 5.8 0.00012 43.5 8.9 47 703-749 17-65 (242)
160 PF08235 LNS2: LNS2 (Lipin/Ned 81.8 5.7 0.00012 39.9 7.8 33 709-741 26-58 (157)
161 COG0474 MgtA Cation transport 81.6 4.9 0.00011 52.9 9.4 24 146-169 160-183 (917)
162 TIGR01686 FkbH FkbH-like domai 81.5 2.6 5.6E-05 48.3 6.2 37 710-746 31-67 (320)
163 COG2179 Predicted hydrolase of 78.7 5.7 0.00012 39.8 6.5 40 710-749 46-85 (175)
164 PHA02597 30.2 hypothetical pro 77.2 7 0.00015 41.2 7.4 34 849-882 133-170 (197)
165 COG0241 HisB Histidinol phosph 77.0 10 0.00022 39.1 8.0 47 837-884 89-146 (181)
166 PF09419 PGP_phosphatase: Mito 72.8 11 0.00025 38.4 7.1 43 707-749 56-107 (168)
167 COG1877 OtsB Trehalose-6-phosp 70.7 97 0.0021 34.3 14.2 167 706-879 36-218 (266)
168 PRK10444 UMP phosphatase; Prov 70.2 4.7 0.0001 44.3 4.0 45 703-747 10-54 (248)
169 KOG3120 Predicted haloacid deh 69.4 30 0.00064 36.5 9.1 40 710-749 84-124 (256)
170 PLN02645 phosphoglycolate phos 68.9 7.2 0.00016 44.5 5.4 48 703-750 37-87 (311)
171 PF03767 Acid_phosphat_B: HAD 68.3 14 0.0003 40.1 7.1 30 709-738 114-143 (229)
172 TIGR01684 viral_ppase viral ph 68.3 7 0.00015 43.3 4.8 41 711-751 146-187 (301)
173 TIGR01458 HAD-SF-IIA-hyp3 HAD- 67.9 7.9 0.00017 42.8 5.3 47 703-749 10-63 (257)
174 TIGR01457 HAD-SF-IIA-hyp2 HAD- 66.7 11 0.00024 41.5 6.1 49 703-751 10-61 (249)
175 TIGR01517 ATPase-IIB_Ca plasma 66.1 15 0.00032 48.8 8.2 59 113-181 137-195 (941)
176 PHA03398 viral phosphatase sup 62.9 10 0.00022 42.2 4.7 40 711-750 148-188 (303)
177 TIGR01993 Pyr-5-nucltdase pyri 62.3 20 0.00043 37.2 6.8 38 710-750 84-121 (184)
178 PRK10725 fructose-1-P/6-phosph 60.7 19 0.0004 37.5 6.3 35 715-750 92-126 (188)
179 COG0637 Predicted phosphatase/ 60.5 29 0.00064 37.3 7.9 43 709-751 85-127 (221)
180 KOG0210 P-type ATPase [Inorgan 58.0 62 0.0013 39.7 10.2 181 59-246 86-290 (1051)
181 PF05297 Herpes_LMP1: Herpesvi 58.0 3.3 7.2E-05 44.3 0.0 17 1112-1128 167-183 (381)
182 PF06570 DUF1129: Protein of u 54.8 1.8E+02 0.004 30.8 12.6 24 1074-1097 150-173 (206)
183 TIGR01689 EcbF-BcbF capsule bi 54.0 11 0.00023 36.6 2.7 33 709-741 23-55 (126)
184 TIGR01663 PNK-3'Pase polynucle 53.7 30 0.00065 42.3 7.1 27 711-737 198-224 (526)
185 KOG3040 Predicted sugar phosph 51.9 27 0.00058 36.3 5.2 48 699-746 12-59 (262)
186 TIGR01458 HAD-SF-IIA-hyp3 HAD- 51.6 40 0.00088 37.2 7.3 52 859-910 196-254 (257)
187 TIGR02251 HIF-SF_euk Dullard-l 51.1 12 0.00026 38.1 2.8 43 706-749 38-80 (162)
188 PRK10748 flavin mononucleotide 49.9 62 0.0013 35.2 8.3 28 710-738 113-140 (238)
189 PF12791 RsgI_N: Anti-sigma fa 49.4 24 0.00051 28.7 3.7 39 135-173 3-42 (56)
190 COG1011 Predicted hydrolase (H 48.7 1.4E+02 0.003 31.9 10.9 40 710-750 99-138 (229)
191 COG4858 Uncharacterized membra 48.6 1.3E+02 0.0028 30.8 9.1 35 1066-1100 157-191 (226)
192 TIGR02468 sucrsPsyn_pln sucros 48.0 1.6E+02 0.0034 39.1 12.5 64 822-886 924-1002(1050)
193 TIGR01657 P-ATPase-V P-type AT 45.4 1.3E+02 0.0028 40.7 11.8 79 107-197 193-273 (1054)
194 TIGR01452 PGP_euk phosphoglyco 44.3 41 0.00089 37.7 6.0 50 703-752 11-63 (279)
195 COG1188 Ribosome-associated he 41.5 41 0.00088 30.9 4.2 35 132-170 28-62 (100)
196 PLN03063 alpha,alpha-trehalose 40.8 9.6E+02 0.021 31.3 18.9 43 711-753 533-578 (797)
197 PTZ00445 p36-lilke protein; Pr 40.3 43 0.00094 35.3 4.8 29 711-739 76-104 (219)
198 TIGR01680 Veg_Stor_Prot vegeta 39.2 1.1E+02 0.0024 33.8 7.9 30 709-738 144-173 (275)
199 COG0647 NagD Predicted sugar p 39.0 37 0.0008 37.6 4.3 46 701-746 15-60 (269)
200 cd02071 MM_CoA_mut_B12_BD meth 35.5 1E+02 0.0022 29.6 6.3 80 645-749 22-103 (122)
201 KOG4050 Glutamate transporter 33.1 2.4E+02 0.0051 28.2 8.1 44 895-938 22-65 (188)
202 cd06919 Asp_decarbox Aspartate 33.1 82 0.0018 29.5 4.8 83 537-668 17-99 (111)
203 KOG1278 Endosomal membrane pro 32.9 4E+02 0.0088 32.3 11.5 78 948-1029 426-508 (628)
204 PF13242 Hydrolase_like: HAD-h 32.0 92 0.002 26.8 4.9 46 859-904 21-73 (75)
205 TIGR00223 panD L-aspartate-alp 31.6 82 0.0018 30.1 4.7 84 537-669 18-101 (126)
206 PF13380 CoA_binding_2: CoA bi 31.5 61 0.0013 30.9 4.0 38 712-749 65-103 (116)
207 PRK05449 aspartate alpha-decar 30.6 92 0.002 29.9 4.8 84 537-669 18-101 (126)
208 cd02067 B12-binding B12 bindin 29.8 1.5E+02 0.0033 28.1 6.6 80 645-749 22-103 (119)
209 PF02261 Asp_decarbox: Asparta 29.7 37 0.0008 31.9 2.0 83 539-670 20-102 (116)
210 TIGR01493 HAD-SF-IA-v2 Haloaci 29.4 77 0.0017 32.3 4.8 33 710-749 90-122 (175)
211 TIGR01501 MthylAspMutase methy 28.6 1.4E+02 0.0031 29.3 6.0 80 645-749 24-111 (134)
212 TIGR01662 HAD-SF-IIIA HAD-supe 27.9 4.3E+02 0.0094 25.3 9.6 95 638-750 29-126 (132)
213 TIGR02230 ATPase_gene1 F0F1-AT 27.7 1.7E+02 0.0038 27.0 6.0 62 1070-1139 37-98 (100)
214 COG3700 AphA Acid phosphatase 27.6 1.6E+02 0.0034 30.1 6.0 38 712-749 116-157 (237)
215 PF03120 DNA_ligase_OB: NAD-de 27.1 34 0.00074 30.3 1.3 24 152-175 45-69 (82)
216 TIGR02250 FCP1_euk FCP1-like p 26.6 97 0.0021 31.3 4.7 43 707-750 55-97 (156)
217 PF12689 Acid_PPase: Acid Phos 25.1 1.1E+02 0.0024 31.3 4.8 41 710-750 45-86 (169)
218 PRK02261 methylaspartate mutas 24.4 2.7E+02 0.0058 27.4 7.2 80 645-749 26-113 (137)
219 PF12710 HAD: haloacid dehalog 24.0 39 0.00084 35.0 1.4 30 847-876 157-192 (192)
220 PLN03064 alpha,alpha-trehalose 24.0 1.4E+03 0.029 30.5 15.2 36 713-748 625-661 (934)
221 PF01479 S4: S4 domain; Inter 24.0 67 0.0015 24.9 2.4 33 128-163 16-48 (48)
222 TIGR01106 ATPase-IIC_X-K sodiu 23.9 3.1E+02 0.0067 36.9 9.9 125 146-319 161-286 (997)
223 COG0522 RpsD Ribosomal protein 23.4 93 0.002 32.9 3.9 39 132-173 113-151 (205)
224 PF09586 YfhO: Bacterial membr 23.4 1.2E+03 0.025 30.7 15.3 29 948-977 132-160 (843)
225 PTZ00413 lipoate synthase; Pro 23.3 7.8E+02 0.017 28.8 11.4 55 695-749 190-253 (398)
226 COG1230 CzcD Co/Zn/Cd efflux s 23.1 1.1E+03 0.024 26.5 20.2 28 920-947 19-46 (296)
227 PRK08508 biotin synthase; Prov 22.5 5.5E+02 0.012 28.7 10.2 37 715-751 101-153 (279)
228 TIGR01460 HAD-SF-IIA Haloacid 22.5 1.3E+02 0.0029 32.6 5.2 47 703-749 7-57 (236)
229 PRK10517 magnesium-transportin 22.2 2.6E+02 0.0057 37.0 8.6 113 73-198 91-208 (902)
230 PF14362 DUF4407: Domain of un 22.2 3.5E+02 0.0075 30.6 8.7 15 1140-1154 105-119 (301)
231 PF13275 S4_2: S4 domain; PDB: 21.8 47 0.001 28.0 1.1 23 146-169 38-60 (65)
232 smart00831 Cation_ATPase_N Cat 21.7 2.3E+02 0.005 23.3 5.4 39 281-319 23-61 (64)
233 PRK14194 bifunctional 5,10-met 21.5 6.7E+02 0.014 28.4 10.4 63 840-902 138-209 (301)
234 TIGR00640 acid_CoA_mut_C methy 21.5 2.5E+02 0.0054 27.5 6.3 80 645-749 25-106 (132)
235 PF04341 DUF485: Protein of un 21.2 1.6E+02 0.0034 26.8 4.5 72 1074-1151 19-91 (91)
236 PRK11507 ribosome-associated p 20.3 99 0.0021 26.5 2.7 22 146-167 42-63 (70)
237 PF14802 TMEM192: TMEM192 fami 20.0 1.1E+03 0.025 25.5 14.9 77 1112-1189 140-224 (236)
No 1
>KOG0206 consensus P-type ATPase [General function prediction only]
Probab=100.00 E-value=5e-197 Score=1790.82 Aligned_cols=1087 Identities=57% Similarity=0.975 Sum_probs=985.9
Q ss_pred CCceeEEEeCCCCCccccccCCCCceeecCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHhcccCCcCCCchhhHHHHHH
Q 001008 34 RGFARVVYCNDPDNPEVVQLNYRGNYVSTTKYTAANFIPKSLFEQFRRVANIYFLVVAFVSFSPLAPYSAPSVLAPLIVV 113 (1191)
Q Consensus 34 ~~~~r~~~~n~~~~~~~~~~~~g~N~i~~~k~~~~~flp~~l~~qf~~~~n~~fl~~~il~~~~~~~~~~~~~~~~l~~v 113 (1191)
++..|+++.|++..++.+..+|+.|+|+|+||++++|+|++||+||+|++|+|||++++++++|++|++++++++||++|
T Consensus 11 ~~~~R~~~~n~~~~~~~~~~~~~~N~i~TtKYt~~tFlPk~l~eQf~r~aN~yFl~~~il~~ip~~~~~~~~~~~pl~~v 90 (1151)
T KOG0206|consen 11 PGFSRVVYCNDPLPFEAPQRKYCDNRISTTKYTLFTFLPKNLFEQFHRVANLYFLFIAILQFIPLSPFNPYTTLVPLLFV 90 (1151)
T ss_pred CCCceEEeCCCCCcchhhhccccCCeeEEEeccchhhhHHHHHHHHHHHHHHHHHHHHHHHcCcccccCccceeeceeee
Confidence 35579999999865555667999999999999999999999999999999999999999999998999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhhHHHHhcceEEEEecCCeEEEEeccccccccEEEEeCCCcccceEEEEeeeCCCceEEEEecc
Q 001008 114 IGATMAKEGVEDWRRRKQDIEANNRKVKVYGQDHTFVETKWKNLRVGDLVKVHKDEYFPADLLLLSSIYEDGICYVETMN 193 (1191)
Q Consensus 114 l~~~~i~~~~~d~~r~k~~~~~n~~~~~V~r~~g~~~~i~~~~L~vGDIV~l~~ge~iPaD~~lL~ss~~~g~~~Vd~s~ 193 (1191)
+.++++||++||++|+++|+++|+++++|+++++.+++..|++|+|||+|++..+|.+|||++||+||+++|.|||+|++
T Consensus 91 l~~t~iKd~~eD~rR~~~D~~iN~~~~~v~~~~~~~~~~~wk~~~vGd~v~v~~~~~~paD~llLsss~~~~~cyveT~n 170 (1151)
T KOG0206|consen 91 LGITAIKDAIEDYRRHKQDKEVNNRKVEVLRGDGCFVEKKWKDVRVGDIVRVEKDEFVPADLLLLSSSDEDGICYVETAN 170 (1151)
T ss_pred ehHHHHHHHHhhhhhhhccHHhhcceeEEecCCceeeeeccceeeeeeEEEeccCCccccceEEecCCCCCceeEEEEee
Confidence 99999999999999999999999999999995455999999999999999999999999999999999999999999999
Q ss_pred CCcccccEeecchhhhcccCChhhhcccceEEEeecCCCCceeeEEEEEEcCeeeccCCCceeecCcEeecCCeEEEEEE
Q 001008 194 LDGETNLKLKRSLEATNHLRDEESFQKFTAVIKCEDPNERLYSFVGTLQYEGKQYPLSPQQILLRDSKLKNTDYVYGVVV 273 (1191)
Q Consensus 194 LtGEs~~~~K~~~~~~~~~~~~~~~~~~~~~i~~e~pn~~~~~f~Gt~~~~g~~~~l~~~n~l~rgs~l~nt~~~~gvVv 273 (1191)
||||||+|.|++...+......+....++|.|+||.||.++|.|.|++..++...|++++|+++|||+++||+|++|+|+
T Consensus 171 LDGEtnLK~k~~l~~~~~~~~~~~~~~~~~~i~cE~p~~~ly~f~g~l~~~~~~~pl~~~~~Llrg~~lrNT~~v~G~vv 250 (1151)
T KOG0206|consen 171 LDGETNLKVKQALECTSKLDSEDSLKNFKGWIECEDPNANLYTFVGNLELQGQIYPLSPDNLLLRGSRLRNTEWVYGVVV 250 (1151)
T ss_pred cCCccccceeeehhhhhcccccccccccCCceEEcCCcccHhhhhhheeeccCCCCCcHHHcccCCceeccCcEEEEEEE
Confidence 99999999999998887755566788899999999999999999999998877679999999999999999999999999
Q ss_pred EecchhhHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcccccCCCccccccccCCCCCcccCCCCc
Q 001008 274 FTGHDTKVMQNATDPPSKRSKIERKMDKIVYLLFSTLILISSTGSVFFGIETKRDIDGGKIRRWYLQPDDATVFYDPRRA 353 (1191)
Q Consensus 274 ~tG~~Tki~~~~~~~~~k~s~l~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 353 (1191)
+||+|||+|+|...++.|++++++.+|+.+..++++++++|++++++.++|......+.. ..||+..+. .
T Consensus 251 ~tG~dtK~~~n~~~~~~Krs~ier~~n~~i~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~-~~~~~~~~~---------~ 320 (1151)
T KOG0206|consen 251 FTGHDTKLMQNSGKPPSKRSRIERKMNKIIILLFVLLILMCLISAIGFAIWTRQDGRHNG-EWWYLSPSE---------A 320 (1151)
T ss_pred EcCCcchHHHhcCCCccccchhhhhhhhhHHHHHHHHHHHHHHHHhhhheeeeecccccC-chhhhcCch---------H
Confidence 999999999999999999999999999999999999999999999999988864422211 356664431 3
Q ss_pred hhHHHHHHHHHHHHhhccccchhhhHHHHHHHHHHHHHhhcccccccCCCCCccccCccccccccceeEEEecCCCcccc
Q 001008 354 PLAAFLHFLTGLMLYGYLIPISLYISIEIVKVLQSVFINHDRDMYYEDTDKPARARTSNLNEELGQVDTILSDKTGTLTC 433 (1191)
Q Consensus 354 ~~~~~~~~~~~i~ll~~~iP~sL~v~~~~~~~~~~~~i~~d~~m~~~~~~~~~~v~~~~~~e~Lg~v~~i~~DKTGTLT~ 433 (1191)
....+..|++++++++.++|+||++++++++++|+.+|++|.+||+++.+.++.+|+++++|+||||+||++|||||||+
T Consensus 321 ~~~~~~~f~t~~il~~~liPISLyvsiEiik~~qs~fi~~D~~my~~e~d~~~~~rtsnl~eeLGqv~yIfSDKTGTLT~ 400 (1151)
T KOG0206|consen 321 AYAGFVHFLTFIILYQYLIPISLYVSIEIVKVLQSIFINNDLDMYDEETDTPAQARTSNLNEELGQVEYIFSDKTGTLTQ 400 (1151)
T ss_pred HHHHHHHHHHHHhhhhceEEEEEEEEeeehHHHHHHHcchHHHhhhccCCCccccccCCchhhhcceeEEEEcCcCcccc
Confidence 34567899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceeEEEEEEEcCeeeccchhHHHHHHHHhhCCcccccCCCCCCCCCCCCccccCCCccCCcccCChhhhcccCCCCCChH
Q 001008 434 NSMEFVKCSVAGVAYGRVMTEVERTLAKRKGERTFEVDDSQTDAPGLNGNIVESGKSVKGFNFRDERIMNGQWVNEPHSD 513 (1191)
Q Consensus 434 n~m~~~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 513 (1191)
|.|+|++|+++|..|+...++.+....++.+.. .+....+++.|.|+.+.++.+...++.+
T Consensus 401 N~M~F~kCsi~g~~yg~~~~~~~~~~~~~~~~~-------------------~~~~~~~~~~f~~~~~~~~~~~~~~~~~ 461 (1151)
T KOG0206|consen 401 NSMEFKKCSINGTSYGRNVTEVEAALAKRSGGD-------------------VNEHKIKGFTFEDSRLVDGLWSSEPQAE 461 (1151)
T ss_pred ceeeeecccccCcccccCCChhhcccCcccccc-------------------ccccccccceeccchhhccccccccCcc
Confidence 999999999999999987655332221111100 0113456788999999998888888899
Q ss_pred HHHHHHHHHhhhccceeccCCCCCceEEecCCccHHHHHHHHHHcCcEEEeecCCeeEEEecCCCCccccceEEEEeEee
Q 001008 514 VIQKFFRVLAICHTAIPDVNEETGEISYEAESPDEAAFVIAAREVGFQFFGSSQTSISLHELDPVSGQKVNRVYELLHVL 593 (1191)
Q Consensus 514 ~~~~~~~~lalC~~~~~~~~~~~~~~~y~~~sp~e~Alv~~a~~~g~~~~~~~~~~~~i~~~~~~~~~~~~~~~~il~~~ 593 (1191)
.+++|++++|+||++.++.+++.+.+.|+++||||.||+++|+++|+.+..|+++.+++...+. .++|++|+++
T Consensus 462 ~~~~f~~~la~chtv~~e~~~~~~~~~Y~A~SPDE~AlV~aAr~~gf~f~~Rt~~~vti~~~g~------~~~y~lL~iL 535 (1151)
T KOG0206|consen 462 DILEFFRALALCHTVIPEKDEDSGKLSYEAESPDEAALVEAARELGFVFLGRTPDSVTIRELGV------EETYELLNVL 535 (1151)
T ss_pred hHHHHhhHHhccceeeeccCCCccceeeecCCCcHHHHHHHHHhcCceeeeccCceEEEecccc------ceeEEEEEEe
Confidence 9999999999999999998766668999999999999999999999999999999999996654 7899999999
Q ss_pred cccCCCceEEEEEEcCCCcEEEEEeccchHHHHHHhhcChhhHHHHHHHHHHHHhccceEEEEEEEecCHHHHHHHHHHH
Q 001008 594 EFTSSRKRMSVMVRNPENQLLLLCKGADSVMFERLSKHGQQFEAETRRHINRYAEAGLRTLVIAYRELGEDEYRIWEKEF 673 (1191)
Q Consensus 594 ~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~l~~~a~~GlR~L~~A~r~l~~~~~~~~~~~~ 673 (1191)
||+|+|||||||||+|+|++.+||||||++|++|+...+....+.+.+|+++||.+||||||+|||+++++||.+|+++|
T Consensus 536 eF~S~RKRMSVIVR~p~g~i~LycKGADsvI~erL~~~~~~~~e~T~~Hl~~yA~eGLRTLc~A~r~l~e~eY~~w~~~~ 615 (1151)
T KOG0206|consen 536 EFNSTRKRMSVIVRDPDGRILLYCKGADSVIFERLSKNGEKLREKTQEHLEEYATEGLRTLCLAYRELDEEEYEEWNERY 615 (1151)
T ss_pred ccccccceeEEEEEcCCCcEEEEEcCcchhhHhhhhhcchHHHHHHHHHHHHHHhhhhhHhhhhhhccCHHHHHHHHHHH
Confidence 99999999999999999999999999999999999988778899999999999999999999999999999999999999
Q ss_pred HHHhhcchhhHHHHHHHHHHHhhccceEEEeeeecccccCCcHHHHHHHHHcCCeEEEEeCCCHhhHHHHHHHcCccccC
Q 001008 674 LKAKTSVTSDREALVASAAEKIERDLILLGATAVEDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQE 753 (1191)
Q Consensus 674 ~~a~~~l~~~r~~~~~~~~~~iE~dl~llG~~~ieD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~ 753 (1191)
++|++++ .||+++++++++.+|+||+++|+|||||+||+|||++|+.|++||||+||||||+.|||++||++|+++.++
T Consensus 616 ~~A~ts~-~~Re~~L~e~ae~iEk~L~LLGATAIEDkLQdgVPetI~~L~~AGIKIWVLTGDK~ETAiNIg~sC~Ll~~~ 694 (1151)
T KOG0206|consen 616 NEAKTSL-TDREELLDEVAEEIEKDLILLGATAIEDKLQDGVPETIAKLAQAGIKIWVLTGDKQETAINIGYSCRLLRQD 694 (1151)
T ss_pred HHHHhhc-cCHHHHHHHHHHHHHhcchhhcceeeechhccCchHHHHHHHHcCCEEEEEcCcHHHHHHHHHHhhcCCCCC
Confidence 9999999 699999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceEEEEecCCchhhhhhhhcchHHHHHHHHHHHHHHHHhhcccccccccccceeEEEEeCchhhHHhHHHHHHHHHHHHh
Q 001008 754 MKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAI 833 (1191)
Q Consensus 754 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~l~~ 833 (1191)
+..+.++..+.+.. ...+... ...+++..++............. ..++++|||+++.++++++.+..|..++.
T Consensus 695 m~~i~i~~~~~~~~-----~~~~~~~-~~~~~l~~~~~~~~~~~~~~~~~-~~~aLVIDGktl~~aL~~~~~~~Fl~la~ 767 (1151)
T KOG0206|consen 695 MKLIIINTETSEEL-----SSLDATA-ALKETLLRKFTEELEEAKLEHSE-KPFALVIDGKTLAYALEDELRKKFLELAK 767 (1151)
T ss_pred ceEEEEecCChhhh-----cchhhHH-HHHHHHHHhhhHHHHHHhhccCc-CCceEEEECHHHHhhhCchhhHHHHHHHH
Confidence 99999988765411 1111111 23333333332222111111111 46899999999999999988899999999
Q ss_pred hcCceEEEcCChhhHHHHHHHh-hcCCCEEEEEcCCccChHhhhhcceeEEeccCccchhhhccceeccchhhhhHhhhh
Q 001008 834 DCASVICCRSSPKQKALVTRLV-KGTGKTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAIAQFRFLERLLLV 912 (1191)
Q Consensus 834 ~~~~~v~~r~sP~qK~~iV~~l-~~~g~~vl~iGDG~ND~~ml~~AdvGI~i~g~e~~~a~~~aD~vl~~f~~l~~lll~ 912 (1191)
.|++|+|||++|.||+.+|+++ +..+.+++|||||+||++|+|+|||||||+|.||.||+++|||++.+|++|.+||++
T Consensus 768 ~C~sViCCR~sPlQKA~Vv~lVk~~~~~~TLAIGDGANDVsMIQ~AhVGVGIsG~EGmQAvmsSD~AIaqFrfL~rLLLV 847 (1151)
T KOG0206|consen 768 RCKSVICCRVSPLQKALVVKLVKKGLKAVTLAIGDGANDVSMIQEAHVGVGISGQEGMQAVMSSDFAIAQFRFLERLLLV 847 (1151)
T ss_pred hcCEEEEccCCHHHHHHHHHHHHhcCCceEEEeeCCCccchheeeCCcCeeeccchhhhhhhcccchHHHHHHHhhhhee
Confidence 9999999999999999999999 578899999999999999999999999999999999999999999999999999999
Q ss_pred hchhhhhHhhHhHHHHHHhHHHHHHHHHHHHhhhccccccchhHHHHHHHHHHhhhhhHHhhhcccccCChhhhhcCccc
Q 001008 913 HGHWCYRRISMMICYFFYKNLTFGFTLFWYEAYASFSGRPAYNDWYMSCYNVFFTSLPVIALGVFDQDVSARLCLKYPLL 992 (1191)
Q Consensus 913 ~GR~~~~~i~~~i~~~~~~n~~~~~~~~~~~~~~~~s~~~~~~~~~~l~~n~~~~~~p~~~l~~~~~d~~~~~~~~~P~l 992 (1191)
||||+|.|++++++|+||||+++++++|||.++++|||+++|++|++.+||++||++|++++|++|+|++++.++++|+|
T Consensus 848 HGhW~Y~R~a~~ilyfFYKNi~f~~~~fwy~f~~gfSgq~~yd~~~l~lyNv~FTSlPvi~lGvfdqDvsa~~~l~~P~L 927 (1151)
T KOG0206|consen 848 HGHWSYIRLAKMILYFFYKNIAFTFTLFWYQFFNGFSGQTLYDDWYLSLYNVLFTSLPVIVLGVFDQDVSAETLLRFPEL 927 (1151)
T ss_pred ecceeHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCccccceEEEEEeEEeecCchhheeecccCCCHHHHhhCCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhccccCCccchhhHHHhhHhHHHHHHHHHHHHHhhhccccccCCCcceehhhhhhHHhhHHHHHHHHHHHhhhccchhh
Q 001008 993 YQEGVQNILFSWPRILGWMSNGVLSAIIIFFFTTNSIFNQAFRKDGHAVDYEVLGVAMYSSVVWAVNCQMALSINYFTWI 1072 (1191)
Q Consensus 993 y~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~f~~~v~~~~~~~~l~~~~~~~~ 1072 (1191)
|+.++++..|+++.|+.|++.|++|++++||+++..+.......+|.+.|++.+|+.+|+++|+++++++++.+++|+|+
T Consensus 928 Y~~g~~~~~f~~~~f~~~~~~g~~~sli~Ff~~~~~~~~~~~~~~G~~~d~~~~G~~~~T~~Vivv~~~iaL~~~ywT~i 1007 (1151)
T KOG0206|consen 928 YQRGQLNLLFNWKRFWGWMLDGFYQSLVIFFLPYLVFEEQAVTSNGLTADYWTLGTTVFTIIVIVVNLKIALETSYWTWI 1007 (1151)
T ss_pred hhhhhhccccchHHHHHHHHHHHHhheeeeeeeHhhheeeeeccCCCcCChhhccceEEEEEEEEEEeeeeeeehheeHH
Confidence 99999999999999999999999999999999999887666778999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCCcc-hhHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHH
Q 001008 1073 QHFFIWGSIALWYIFLVVYGSLPPTFST-TAYKVLVEACAPSILYWLTTLLVVVSTLLPYFLYRAFQTRFRPMYHDLIQR 1151 (1191)
Q Consensus 1073 ~~~~i~~si~~~~i~~~i~~~~~~~~~~-~~~~~~~~~~~~s~~~wl~~l~~~~~~ll~~~i~k~~~~~~~P~~~~i~~e 1151 (1191)
+++++|+|+++|+++.++|...++.+.. ..+..++.....+|.||++++++++++++|+++++.+++.++|++.+++||
T Consensus 1008 ~~i~i~gSi~~~f~f~~iy~~~~~~~~~~~~~~~~~~~~~~~p~fWl~~ll~~v~~Llp~~~~~~l~~~~~Pt~~~~i~~ 1087 (1151)
T KOG0206|consen 1008 NHIVIWGSILLWFVFLFIYSELTPAISTPDPFYGVAEHLLSSPSFWLTLLLTVVAALLPDFVYKSLQRTFFPTDHDIIQE 1087 (1151)
T ss_pred HHHHHHHHHHHHHHHHHHHhccccccCCCccHHHHHHHHhcCchHHHHHHHHHHHHHhHHHHHHHHHHhhCCcHHHHHHH
Confidence 9999999999999999999864333333 455557788899999999999999999999999999999999999999999
Q ss_pred HHHhcCcccccc
Q 001008 1152 QRLEGSETEISS 1163 (1191)
Q Consensus 1152 ~~~~~~~~~~~~ 1163 (1191)
+++...+.+...
T Consensus 1088 ~~~~~~~~~~~~ 1099 (1151)
T KOG0206|consen 1088 IEKYRRRASDSR 1099 (1151)
T ss_pred HHhccccccccc
Confidence 998555444443
No 2
>PLN03190 aminophospholipid translocase; Provisional
Probab=100.00 E-value=2.7e-181 Score=1720.81 Aligned_cols=1087 Identities=38% Similarity=0.622 Sum_probs=922.6
Q ss_pred CceeEEEeCCCCCccccccCCCCceeecCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHhccc-CCcCCCchhhHHHHHH
Q 001008 35 GFARVVYCNDPDNPEVVQLNYRGNYVSTTKYTAANFIPKSLFEQFRRVANIYFLVVAFVSFSP-LAPYSAPSVLAPLIVV 113 (1191)
Q Consensus 35 ~~~r~~~~n~~~~~~~~~~~~g~N~i~~~k~~~~~flp~~l~~qf~~~~n~~fl~~~il~~~~-~~~~~~~~~~~~l~~v 113 (1191)
...|.|++|++... +.+.+|++|+|+|+||++|+|+|++||+||+|++|+|||+++++|++| +++.+++++++||+++
T Consensus 68 ~~~r~i~~~~~~~~-~~~~~f~~N~i~TsKYt~~tFlP~~L~eQF~r~aN~YFL~I~ilq~ip~~s~~~~~t~~~PL~~v 146 (1178)
T PLN03190 68 EDARLVYLNDPEKS-NERFEFAGNSIRTAKYSVFSFLPRNLFEQFHRVAYIYFLVIAVLNQLPQLAVFGRGASILPLAFV 146 (1178)
T ss_pred CCceEEEcCCCCcc-cccccCCCCeeeccccccHHHHHHHHHHHHHhhhhHHHHHHHHHHhCCCcccCCcchHHHHHHHH
Confidence 45799999987422 234579999999999999999999999999999999999999999999 8999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhhHHHHhcceEEEEecCCeEEEEeccccccccEEEEeCCCcccceEEEEeeeCCCceEEEEecc
Q 001008 114 IGATMAKEGVEDWRRRKQDIEANNRKVKVYGQDHTFVETKWKNLRVGDLVKVHKDEYFPADLLLLSSIYEDGICYVETMN 193 (1191)
Q Consensus 114 l~~~~i~~~~~d~~r~k~~~~~n~~~~~V~r~~g~~~~i~~~~L~vGDIV~l~~ge~iPaD~~lL~ss~~~g~~~Vd~s~ 193 (1191)
++++++++++||++|+++|+++|+++++|++ +|++++++|++|+|||||+|++||+||||++||+||+++|.|+||||+
T Consensus 147 l~v~~ike~~Ed~~r~k~d~~~N~~~~~v~~-~~~~~~i~~~~i~vGDiv~v~~ge~iPaD~~ll~Ss~~~G~~~Vdts~ 225 (1178)
T PLN03190 147 LLVTAVKDAYEDWRRHRSDRIENNRLAWVLV-DDQFQEKKWKDIRVGEIIKIQANDTLPCDMVLLSTSDPTGVAYVQTIN 225 (1178)
T ss_pred HHHHHHHHHHHHHHHHHhHHhhcCcEEEEEE-CCeEEEEeHHHCCCCCEEEECCCCEeeeeEEEEeccCCCceEEEEccc
Confidence 9999999999999999999999999999999 999999999999999999999999999999999999999999999999
Q ss_pred CCcccccEeecchhhhcccCChhhhcccceEEEeecCCCCceeeEEEEEEcCeeeccCCCceeecCcEeecCCeEEEEEE
Q 001008 194 LDGETNLKLKRSLEATNHLRDEESFQKFTAVIKCEDPNERLYSFVGTLQYEGKQYPLSPQQILLRDSKLKNTDYVYGVVV 273 (1191)
Q Consensus 194 LtGEs~~~~K~~~~~~~~~~~~~~~~~~~~~i~~e~pn~~~~~f~Gt~~~~g~~~~l~~~n~l~rgs~l~nt~~~~gvVv 273 (1191)
|||||+||.|.+++.+... ......+.|.|+||.||++++.|.|++.++|+..+++.+|+++|||+|+||+|++|+|+
T Consensus 226 LdGEt~~k~k~~~~~~~~~--~~~~~~~~~~i~~e~Pn~~l~~F~G~i~~~~~~~~l~~~n~llRG~~LrnT~~i~GvVV 303 (1178)
T PLN03190 226 LDGESNLKTRYAKQETLSK--IPEKEKINGLIKCEKPNRNIYGFQANMEVDGKRLSLGPSNIILRGCELKNTAWAIGVAV 303 (1178)
T ss_pred cCCeeeeeEecccchhhhc--chhhhhceEEEEEeCCCccceeEEEEEEECCCcccCCccceeeccceecCCceEEEEEE
Confidence 9999999999988765321 12235678999999999999999999999999999999999999999999999999999
Q ss_pred EecchhhHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcccccCCCccccccccCCCCC-------c
Q 001008 274 FTGHDTKVMQNATDPPSKRSKIERKMDKIVYLLFSTLILISSTGSVFFGIETKRDIDGGKIRRWYLQPDDAT-------V 346 (1191)
Q Consensus 274 ~tG~~Tki~~~~~~~~~k~s~l~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~-------~ 346 (1191)
|||+|||+++|...++.|+|++|+.+|+++.+++++++++|++++++...|......+ .||+.+.... .
T Consensus 304 YTG~dTK~~~N~~~~~~K~S~le~~~N~~vi~l~~i~~~l~~i~~i~~~~~~~~~~~~----~~yl~~~~~~~~~~~~~~ 379 (1178)
T PLN03190 304 YCGRETKAMLNNSGAPSKRSRLETRMNLEIIILSLFLIALCTIVSVCAAVWLRRHRDE----LDTIPFYRRKDFSEGGPK 379 (1178)
T ss_pred EechhhhHhhcCCCCCCCccHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhhhcccccc----cccccccccccccccccc
Confidence 9999999999999999999999999999999999999999999988877775432222 3444321100 0
Q ss_pred ccCCCCchhHHHHHHHHHHHHhhccccchhhhHHHHHHHHHHHHHhhcccccccCCCCCccccCccccccccceeEEEec
Q 001008 347 FYDPRRAPLAAFLHFLTGLMLYGYLIPISLYISIEIVKVLQSVFINHDRDMYYEDTDKPARARTSNLNEELGQVDTILSD 426 (1191)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~i~ll~~~iP~sL~v~~~~~~~~~~~~i~~d~~m~~~~~~~~~~v~~~~~~e~Lg~v~~i~~D 426 (1191)
.++........+..|++++++++.+||+||++++++++++|+++|++|.+||+++.+.++.||+++++|+||+|+|||+|
T Consensus 380 ~~~~~~~~~~~~~~f~~~lil~~~~IPISL~Vtleivk~~qa~~I~~D~~m~~~~~~~~~~vr~snl~EeLGqV~yIfSD 459 (1178)
T PLN03190 380 NYNYYGWGWEIFFTFLMSVIVFQIMIPISLYISMELVRVGQAYFMIRDDQMYDEASNSRFQCRALNINEDLGQIKYVFSD 459 (1178)
T ss_pred ccccchhhHHHHHHHHHHHHHHHhhcceeeeeeHHHHHHHHHHHHHhhhhcccccCCCcceeccCcchhhhccceEEEEc
Confidence 00000111234667888899999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCccccceeEEEEEEEcCeeeccchhHHHHHHHHhhCCcccccCCCCCCCCCCCCccccCCCccCCcccCChhhhcccC
Q 001008 427 KTGTLTCNSMEFVKCSVAGVAYGRVMTEVERTLAKRKGERTFEVDDSQTDAPGLNGNIVESGKSVKGFNFRDERIMNGQW 506 (1191)
Q Consensus 427 KTGTLT~n~m~~~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 506 (1191)
||||||+|+|+|++|+++|..|+.+....+.... ......+ + .....+...+.++.+.....
T Consensus 460 KTGTLT~N~M~fk~~~i~g~~y~~~~~~~~~~~~-~~~~~~~----------~-------~~~~~~~~~~~~~~~~~~~~ 521 (1178)
T PLN03190 460 KTGTLTENKMEFQCASIWGVDYSDGRTPTQNDHA-GYSVEVD----------G-------KILRPKMKVKVDPQLLELSK 521 (1178)
T ss_pred CCCccccceEEEEEEEECCEEcccccccchhhhh-ccccccc----------c-------ccccccccccCCHHHHhhhh
Confidence 9999999999999999999999753221110000 0000000 0 00000000112222222111
Q ss_pred --CCCCChHHHHHHHHHHhhhccceeccCCC--C---CceEEecCCccHHHHHHHHHHcCcEEEeecCCeeEEEecCCCC
Q 001008 507 --VNEPHSDVIQKFFRVLAICHTAIPDVNEE--T---GEISYEAESPDEAAFVIAAREVGFQFFGSSQTSISLHELDPVS 579 (1191)
Q Consensus 507 --~~~~~~~~~~~~~~~lalC~~~~~~~~~~--~---~~~~y~~~sp~e~Alv~~a~~~g~~~~~~~~~~~~i~~~~~~~ 579 (1191)
...+..+.+.+|++++|+||++.++..++ . +.++|+++||||.||+++|+++|+.+..|+++.+.+...+.
T Consensus 522 ~~~~~~~~~~i~~fl~~lalChtv~~~~~~~~~~~~~~~~~Y~a~SPdE~ALv~~a~~~G~~l~~r~~~~i~i~~~~~-- 599 (1178)
T PLN03190 522 SGKDTEEAKHVHDFFLALAACNTIVPIVVDDTSDPTVKLMDYQGESPDEQALVYAAAAYGFMLIERTSGHIVIDIHGE-- 599 (1178)
T ss_pred ccccchhhHHHHHHHHHHHhcCCceeeccCCCCCccccceEEecCCCcHHHHHHHHHHCCCeEecccCCeEEEeeccc--
Confidence 11122345789999999999999853211 1 24689999999999999999999999999999999988876
Q ss_pred ccccceEEEEeEeecccCCCceEEEEEEcCCCcEEEEEeccchHHHHHHhhc-ChhhHHHHHHHHHHHHhccceEEEEEE
Q 001008 580 GQKVNRVYELLHVLEFTSSRKRMSVMVRNPENQLLLLCKGADSVMFERLSKH-GQQFEAETRRHINRYAEAGLRTLVIAY 658 (1191)
Q Consensus 580 ~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~-~~~~~~~~~~~l~~~a~~GlR~L~~A~ 658 (1191)
..+|++++++||+|+|||||||++++++++.+||||||++|+++|+.. +.+.++++.+++++|+.+|+||||+||
T Consensus 600 ----~~~~~il~~~pF~S~rKrMSvIv~~~~~~~~l~~KGA~e~il~~~~~~~~~~~~~~~~~~l~~~a~~GlRtL~lA~ 675 (1178)
T PLN03190 600 ----RQRFNVLGLHEFDSDRKRMSVILGCPDKTVKVFVKGADTSMFSVIDRSLNMNVIRATEAHLHTYSSLGLRTLVVGM 675 (1178)
T ss_pred ----eecceeEEEecccccccEEEEEEEcCCCcEEEEEecCcHHHHHhhcccccchhHHHHHHHHHHHHhcCCceEEEEE
Confidence 889999999999999999999999988999999999999999999754 335677889999999999999999999
Q ss_pred EecCHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHHhhccceEEEeeeecccccCCcHHHHHHHHHcCCeEEEEeCCCHh
Q 001008 659 RELGEDEYRIWEKEFLKAKTSVTSDREALVASAAEKIERDLILLGATAVEDKLQKGVPECIDKLAQAGIKVWVLTGDKME 738 (1191)
Q Consensus 659 r~l~~~~~~~~~~~~~~a~~~l~~~r~~~~~~~~~~iE~dl~llG~~~ieD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ 738 (1191)
|+++++++.+|..+|.+|+.++ .+|++.++++.+.+|+||+++|+++++|++|++++++|+.|++|||++||+|||+.+
T Consensus 676 k~l~~~e~~~~~~~~~~a~~~~-~~r~~~l~~~~~~iE~dL~~lG~~~~~D~lr~~v~~~I~~l~~agi~v~mlTGD~~~ 754 (1178)
T PLN03190 676 RELNDSEFEQWHFSFEAASTAL-IGRAALLRKVASNVENNLTILGASAIEDKLQQGVPEAIESLRTAGIKVWVLTGDKQE 754 (1178)
T ss_pred EeCCHHHHhhHHHHHHHhhhhh-hhhHHHHHhhHHhhhcCcEEEEEEEEecCCchhHHHHHHHHHHCCCEEEEECCCCHH
Confidence 9999999999999999999999 899999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHcCccccCceEEEEecCCchhhhhhhhcchHHHHHHHHHHHH-HHHHhhc-ccccccccccceeEEEEeCchh
Q 001008 739 TAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVT-KQIREGI-SQVNSAKESKVTFGLVIDGKSL 816 (1191)
Q Consensus 739 ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~~lvi~G~~l 816 (1191)
||++||++|||+++++..+.++.+..+.. .+.+.+....... ....... ...........+.+++++|.++
T Consensus 755 tAi~IA~s~~Ll~~~~~~i~i~~~~~~~~-------~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lVIdG~~L 827 (1178)
T PLN03190 755 TAISIGYSSKLLTNKMTQIIINSNSKESC-------RKSLEDALVMSKKLTTVSGISQNTGGSSAAASDPVALIIDGTSL 827 (1178)
T ss_pred HHHHHHHHhCCCCCCCeeEEecCCchhhH-------HHHHHHHhhhhhhccccccccccccccccccCCceEEEEEcHHH
Confidence 99999999999999988888766542211 1111111100000 0000000 0000011224567899999999
Q ss_pred hHHhHHHHHHHHHHHHhhcCceEEEcCChhhHHHHHHHhhcC-CCEEEEEcCCccChHhhhhcceeEEeccCccchhhhc
Q 001008 817 DFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLVKGT-GKTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMS 895 (1191)
Q Consensus 817 ~~~~~~~~~~~~~~l~~~~~~~v~~r~sP~qK~~iV~~l~~~-g~~vl~iGDG~ND~~ml~~AdvGI~i~g~e~~~a~~~ 895 (1191)
..++++++++.|.+++..|++|||||++|.||+++|+++|+. +++|+|||||+||++|||+||||||++|+||.||+++
T Consensus 828 ~~~l~~~~~~~f~~l~~~~~~VI~cR~sP~QKa~IV~~vk~~~~~vtlaIGDGaNDv~mIq~AdVGIGIsG~EG~qA~~a 907 (1178)
T PLN03190 828 VYVLDSELEEQLFQLASKCSVVLCCRVAPLQKAGIVALVKNRTSDMTLAIGDGANDVSMIQMADVGVGISGQEGRQAVMA 907 (1178)
T ss_pred HHHhhhHHHHHHHHHHHhCCEEEEecCCHHHHHHHHHHHHhcCCcEEEEECCCcchHHHHHhcCeeeeecCchhHHHHHh
Confidence 999988888999999999999999999999999999999665 6899999999999999999999999999999999999
Q ss_pred cceeccchhhhhHhhhhhchhhhhHhhHhHHHHHHhHHHHHHHHHHHHhhhccccccchhHHHHHHHHHHhhhhhHHhhh
Q 001008 896 SDYAIAQFRFLERLLLVHGHWCYRRISMMICYFFYKNLTFGFTLFWYEAYASFSGRPAYNDWYMSCYNVFFTSLPVIALG 975 (1191)
Q Consensus 896 aD~vl~~f~~l~~lll~~GR~~~~~i~~~i~~~~~~n~~~~~~~~~~~~~~~~s~~~~~~~~~~l~~n~~~~~~p~~~l~ 975 (1191)
|||++.+|++|.+||++|||++|+|++.+++|+||||+++++++|||+++++|||+++|++|.+++||++||++|++++|
T Consensus 908 SDfaI~~Fr~L~rLLlvHGr~~y~R~s~~i~y~fYKN~~~~~~qf~f~~~~~fSg~~ly~~~~~~~yN~~fTslPii~~~ 987 (1178)
T PLN03190 908 SDFAMGQFRFLVPLLLVHGHWNYQRMGYMILYNFYRNAVFVLVLFWYVLFTCFTLTTAINEWSSVLYSVIYTALPTIVVG 987 (1178)
T ss_pred hccchhhhHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHhHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccCChhhhhcCccchhccccCCccchhhHHHhhHhHHHHHHHHHHHHHhhhccccccCCCcceehhhhhhHHhhHHH
Q 001008 976 VFDQDVSARLCLKYPLLYQEGVQNILFSWPRILGWMSNGVLSAIIIFFFTTNSIFNQAFRKDGHAVDYEVLGVAMYSSVV 1055 (1191)
Q Consensus 976 ~~~~d~~~~~~~~~P~ly~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~f~~~v 1055 (1191)
++|+|++++.++++|+||+.++++..++.+.|+.|++.|+|||+++|+++++.+... ..+.+.++.+.+++++
T Consensus 988 ifD~dv~~~~l~~~P~LY~~~~~~~~~n~~~F~~w~~~~i~qs~iiff~~~~~~~~~-------~~~~~~~~~~~~~~~v 1060 (1178)
T PLN03190 988 ILDKDLSRRTLLKYPQLYGAGQRQEAYNSKLFWLTMIDTLWQSAVVFFVPLFAYWAS-------TIDGSSIGDLWTLAVV 1060 (1178)
T ss_pred HhcccCCHHHHHhCcHhhhhhccCCccCHHHHHHHHHHHHHHHHHHHHHHHHHhcCC-------CcCceeEhHhhhhHHH
Confidence 999999999999999999999999999999999999999999999999988876532 1233345778888999
Q ss_pred HHHHHHHHhhhccchhhHHHHHHHHHHHHHHHHHHHhcCCCCCcchhHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHH
Q 001008 1056 WAVNCQMALSINYFTWIQHFFIWGSIALWYIFLVVYGSLPPTFSTTAYKVLVEACAPSILYWLTTLLVVVSTLLPYFLYR 1135 (1191)
Q Consensus 1056 ~~~~~~~~l~~~~~~~~~~~~i~~si~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~s~~~wl~~l~~~~~~ll~~~i~k 1135 (1191)
+++|+++++.+++|+|+++.++|+|+++++++.+++..++.. . .|+.++ .++.+|.||+.++++++++++|+++++
T Consensus 1061 ~~vnl~i~~~~~~wt~~~~~~i~~Si~~~~i~~~~~~~~~~~-~--~~~~~~-~~~~~~~fwl~ill~~~~~l~p~~~~~ 1136 (1178)
T PLN03190 1061 ILVNLHLAMDIIRWNWITHAAIWGSIVATFICVIVIDAIPTL-P--GYWAIF-HIAKTGSFWLCLLAIVVAALLPRFVVK 1136 (1178)
T ss_pred HHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHhcccc-h--hHHHHH-HHhccHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999988877632 2 244333 566789999999999999999999999
Q ss_pred HHHHhcCCChHHHHHHHHHhcCcccc---ccccccccCCC
Q 001008 1136 AFQTRFRPMYHDLIQRQRLEGSETEI---SSQTEVSSELP 1172 (1191)
Q Consensus 1136 ~~~~~~~P~~~~i~~e~~~~~~~~~~---~~~~~~~~~~~ 1172 (1191)
++++.|+|++++++||.++.+..+.. .+.+.+++.+|
T Consensus 1137 ~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1176 (1178)
T PLN03190 1137 VLYQYFTPCDVQIAREAEKFGTFRESQPVEVEMNPILEPP 1176 (1178)
T ss_pred HHHHHcCCCHHHHHHHHHHhcccccchhhhccccccccCC
Confidence 99999999999999997765443332 44556666665
No 3
>TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase. This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes.
Probab=100.00 E-value=2.3e-169 Score=1635.75 Aligned_cols=1050 Identities=53% Similarity=0.880 Sum_probs=917.1
Q ss_pred CCCceeecCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHhccc-CCcCCCchhhHHHHHHHHHHHHHHHHHHHHHhhhHH
Q 001008 55 YRGNYVSTTKYTAANFIPKSLFEQFRRVANIYFLVVAFVSFSP-LAPYSAPSVLAPLIVVIGATMAKEGVEDWRRRKQDI 133 (1191)
Q Consensus 55 ~g~N~i~~~k~~~~~flp~~l~~qf~~~~n~~fl~~~il~~~~-~~~~~~~~~~~~l~~vl~~~~i~~~~~d~~r~k~~~ 133 (1191)
|++|+|+|+||++|+|+|++||+||++++|+|||+++++|++| +++.+++++++||+++++++++++++||++|+++|+
T Consensus 1 ~~~N~i~tskY~~~~flp~~l~~qf~~~~N~yfl~i~ilq~ip~~s~~~~~t~~~pL~~v~~~~~~~~~~ed~~r~~~d~ 80 (1057)
T TIGR01652 1 FCSNKISTTKYTVLTFLPKNLFEQFKRFANLYFLVVALLQQVPILSPTYRGTSIVPLAFVLIVTAIKEAIEDIRRRRRDK 80 (1057)
T ss_pred CCCCcccCccCcchhhhHHHHHHHHHHHhhHHHHHHHHHHcCCCcCCCCccHhHHhHHHHHHHHHHHHHHHHHHHHHhHH
Confidence 7899999999999999999999999999999999999999999 888899999999999999999999999999999999
Q ss_pred HHhcceEEEEecC-CeEEEEeccccccccEEEEeCCCcccceEEEEeeeCCCceEEEEeccCCcccccEeecchhhhccc
Q 001008 134 EANNRKVKVYGQD-HTFVETKWKNLRVGDLVKVHKDEYFPADLLLLSSIYEDGICYVETMNLDGETNLKLKRSLEATNHL 212 (1191)
Q Consensus 134 ~~n~~~~~V~r~~-g~~~~i~~~~L~vGDIV~l~~ge~iPaD~~lL~ss~~~g~~~Vd~s~LtGEs~~~~K~~~~~~~~~ 212 (1191)
++|+++|+|+| + |++++++|+||+|||||+|++||.||||++||++++++|.|+||||+|||||+||.|++...+...
T Consensus 81 ~~n~~~~~v~~-~~~~~~~i~~~~l~~GDiv~l~~g~~iPaD~~ll~ss~~~g~~~v~~s~l~GEs~~~~k~~~~~~~~~ 159 (1057)
T TIGR01652 81 EVNNRLTEVLE-GHGQFVEIPWKDLRVGDIVKVKKDERIPADLLLLSSSEPDGVCYVETANLDGETNLKLRQALEETQKM 159 (1057)
T ss_pred HHhCcEEEEEC-CCCcEEEeeeecccCCCEEEEcCCCcccceEEEEeccCCCceEEEEeeccCCeecceEeecchhhhcc
Confidence 99999999999 6 899999999999999999999999999999999999999999999999999999999998776555
Q ss_pred CChhhhcccceEEEeecCCCCceeeEEEEEEcC-eeeccCCCceeecCcEeecCCeEEEEEEEecchhhHhhccCCCCCC
Q 001008 213 RDEESFQKFTAVIKCEDPNERLYSFVGTLQYEG-KQYPLSPQQILLRDSKLKNTDYVYGVVVFTGHDTKVMQNATDPPSK 291 (1191)
Q Consensus 213 ~~~~~~~~~~~~i~~e~pn~~~~~f~Gt~~~~g-~~~~l~~~n~l~rgs~l~nt~~~~gvVv~tG~~Tki~~~~~~~~~k 291 (1191)
.....+..++|.|+||.||++++.|+|++.+++ ...|++.+|+++|||.++||+|++|+|+|||++||+++|...++.|
T Consensus 160 ~~~~~~~~~~~~i~~~~p~~~l~~F~G~~~~~~~~~~~l~~~N~l~rGs~l~nt~~~~gvVvyTG~~Tk~~~n~~~~~~k 239 (1057)
T TIGR01652 160 LDEDDIKNFSGEIECEQPNASLYSFQGNMTINGDRQYPLSPDNILLRGCTLRNTDWVIGVVVYTGHDTKLMRNATQAPSK 239 (1057)
T ss_pred CChhhHhhceEEEEEcCCCCcceEEEEEEEECCCCcccCCHHHhHhcCCEecCCCeEEEEEEEEchhhhhhhcCCCCccc
Confidence 455667788999999999999999999999988 7789999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcccccCCCccccccccCCCCCcccCCCCchhHHHHHHHHHHHHhhcc
Q 001008 292 RSKIERKMDKIVYLLFSTLILISSTGSVFFGIETKRDIDGGKIRRWYLQPDDATVFYDPRRAPLAAFLHFLTGLMLYGYL 371 (1191)
Q Consensus 292 ~s~l~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ll~~~ 371 (1191)
+|++|+++|+++.+++.+++++|++++++..+|...... ..||+..+.. ..+.....+..|++++++++.+
T Consensus 240 ~s~le~~ln~~~~~l~~~~i~l~~i~~i~~~~~~~~~~~----~~~yl~~~~~-----~~~~~~~~~~~~~~~~~L~~~~ 310 (1057)
T TIGR01652 240 RSRLEKELNFLIIILFCLLFVLCLISSVGAGIWNDAHGK----DLWYIRLDVS-----ERNAAANGFFSFLTFLILFSSL 310 (1057)
T ss_pred ccHHHHHHhhHHHHHHHHHHHHHHHHHHHHHheecccCC----CccceecCcc-----cccchhHHHHHHHHHHHHHhhh
Confidence 999999999999999999999999998887666543222 2688754321 1122334566889999999999
Q ss_pred ccchhhhHHHHHHHHHHHHHhhcccccccCCCCCccccCccccccccceeEEEecCCCccccceeEEEEEEEcCeeeccc
Q 001008 372 IPISLYISIEIVKVLQSVFINHDRDMYYEDTDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFVKCSVAGVAYGRV 451 (1191)
Q Consensus 372 iP~sL~v~~~~~~~~~~~~i~~d~~m~~~~~~~~~~v~~~~~~e~Lg~v~~i~~DKTGTLT~n~m~~~~~~i~~~~y~~~ 451 (1191)
||++|+++++++++++++++++|.+|++++.++++.+|+++++|+||+|+|||+|||||||+|+|+|++|+++|..|+.+
T Consensus 311 IPisL~v~l~l~~~~~~~~i~~D~~m~~~~~~~~~~vr~~~~~E~LG~v~~I~sDKTGTLT~N~M~~~~~~i~g~~y~~~ 390 (1057)
T TIGR01652 311 IPISLYVSLELVKSVQAYFINSDLQMYHEKTDTPASVRTSNLNEELGQVEYIFSDKTGTLTQNIMEFKKCSIAGVSYGDG 390 (1057)
T ss_pred cceeeeehHHHHHHHHHHHHhhhhhhhccccCCcceeecCCChHHhcCeeEEEEcCCCceeeeeEEEEEEEECCEEecCC
Confidence 99999999999999999999999999988778899999999999999999999999999999999999999999999865
Q ss_pred hhHHHHHHHHhhCCcccccCCCCCCCCCCCCccccCCCccCCcccCChhhhcccCCCCCChHHHHHHHHHHhhhccceec
Q 001008 452 MTEVERTLAKRKGERTFEVDDSQTDAPGLNGNIVESGKSVKGFNFRDERIMNGQWVNEPHSDVIQKFFRVLAICHTAIPD 531 (1191)
Q Consensus 452 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~lalC~~~~~~ 531 (1191)
..+......+..+.... .. .......+...|.++++.+....+++..+.+.++++++++||++.+.
T Consensus 391 ~~~~~~~~~~~~~~~~~----------~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~lC~~v~~~ 456 (1057)
T TIGR01652 391 FTEIKDAIRERLGSYVE----------NE----NSMLVESKGFTFVDPRLVDLLKTNKPNAKRINEFFLALALCHTVVPE 456 (1057)
T ss_pred cchHHHHhhhccccccc----------cc----ccccccccccccCcHHHHHhhhcCCchhHHHHHHHHHHHhcCccccc
Confidence 43322111111110000 00 00000011234556655544332334456788999999999999987
Q ss_pred c-CCCCCceEEecCCccHHHHHHHHHHcCcEEEeecCCe--eEEEecCCCCccccceEEEEeEeecccCCCceEEEEEEc
Q 001008 532 V-NEETGEISYEAESPDEAAFVIAAREVGFQFFGSSQTS--ISLHELDPVSGQKVNRVYELLHVLEFTSSRKRMSVMVRN 608 (1191)
Q Consensus 532 ~-~~~~~~~~y~~~sp~e~Alv~~a~~~g~~~~~~~~~~--~~i~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~ 608 (1191)
. +++.+.+.|+++||+|.||+++|+.+|+.+.+|+.+. +.+...+. ...|++++++||+|+||||||++++
T Consensus 457 ~~~~~~~~~~y~~~sp~E~ALl~~a~~~g~~~~~~~~~~~~~~i~~~~~------~~~~~il~~~pF~s~rKrmSviv~~ 530 (1057)
T TIGR01652 457 FNDDGPEEITYQAASPDEAALVKAARDVGFVFFERTPKSISLLIEMHGE------TKEYEILNVLEFNSDRKRMSVIVRN 530 (1057)
T ss_pred ccCCCCCceEEEccCCcHHHHHHHHHHCCCEEEEecCCceEEEEEeCCC------EEEEEEEEecccCCCCCeEEEEEEe
Confidence 5 2223457899999999999999999999999998874 44444454 7889999999999999999999999
Q ss_pred CCCcEEEEEeccchHHHHHHhhcChhhHHHHHHHHHHHHhccceEEEEEEEecCHHHHHHHHHHHHHHhhcchhhHHHHH
Q 001008 609 PENQLLLLCKGADSVMFERLSKHGQQFEAETRRHINRYAEAGLRTLVIAYRELGEDEYRIWEKEFLKAKTSVTSDREALV 688 (1191)
Q Consensus 609 ~~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~l~~~a~~GlR~L~~A~r~l~~~~~~~~~~~~~~a~~~l~~~r~~~~ 688 (1191)
+++++++|+||||++|+++|...+++.++++.+++++|+.+|+|||++|||+++++|+.+|.++|++|+.++ .+|++.+
T Consensus 531 ~~~~~~l~~KGA~e~il~~~~~~~~~~~~~~~~~~~~~a~~GlRtL~~A~k~l~~~e~~~~~~~~~~a~~~~-~~r~~~~ 609 (1057)
T TIGR01652 531 PDGRIKLLCKGADTVIFKRLSSGGNQVNEETKEHLENYASEGLRTLCIAYRELSEEEYEEWNEEYNEASTAL-TDREEKL 609 (1057)
T ss_pred CCCeEEEEEeCcHHHHHHHhhccchhHHHHHHHHHHHHHHcCCcEEEEEEEECCHHHHHHHHHHHHHHHhhh-hhHHHHH
Confidence 888999999999999999998654566788899999999999999999999999999999999999999998 7999999
Q ss_pred HHHHHHhhccceEEEeeeecccccCCcHHHHHHHHHcCCeEEEEeCCCHhhHHHHHHHcCccccCceEEEEecCCchhhh
Q 001008 689 ASAAEKIERDLILLGATAVEDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEA 768 (1191)
Q Consensus 689 ~~~~~~iE~dl~llG~~~ieD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~ 768 (1191)
++..+.+|+||+|+|++|+|||||+||+++|+.|++||||+||+|||+.+||++||++||+++++...+.++.++.+...
T Consensus 610 ~~~~~~iE~~L~~lG~~gieD~lq~~v~etI~~L~~AGIkv~mlTGD~~~TA~~IA~~~~ii~~~~~~~~i~~~~~~~~~ 689 (1057)
T TIGR01652 610 DVVAESIEKDLILLGATAIEDKLQEGVPETIELLRQAGIKIWVLTGDKVETAINIGYSCRLLSRNMEQIVITSESLDATR 689 (1057)
T ss_pred HHHHHHHHhcCEEEEEEEEhhhhhhccHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCeEEEEecCchhhhH
Confidence 99999999999999999999999999999999999999999999999999999999999999988888887765432111
Q ss_pred hhhhcchHHHHHHHHHHHHHHHHhhcccccccccccceeEEEEeCchhhHHhHHHHHHHHHHHHhhcCceEEEcCChhhH
Q 001008 769 LEKQGDKENITKVSLESVTKQIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQK 848 (1191)
Q Consensus 769 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~l~~~~~~~v~~r~sP~qK 848 (1191)
.. .+.+. .++........ ......+++++++|++++.+++++++++|.+++..|+++||||++|+||
T Consensus 690 ~~----~~~i~--------~~~~~~~~~~~-~~~~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vV~aR~sP~qK 756 (1057)
T TIGR01652 690 SV----EAAIK--------FGLEGTSEEFN-NLGDSGNVALVIDGKSLGYALDEELEKEFLQLALKCKAVICCRVSPSQK 756 (1057)
T ss_pred HH----HHHHH--------HHHHHHHHhhh-hhccCCceEEEEccHHHHHHHhhHHHHHHHHHHhhCCEEEEeCCCHHHH
Confidence 00 01111 11110000000 1112456789999999999998888889999999999999999999999
Q ss_pred HHHHHHhhcC-CCEEEEEcCCccChHhhhhcceeEEeccCccchhhhccceeccchhhhhHhhhhhchhhhhHhhHhHHH
Q 001008 849 ALVTRLVKGT-GKTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAIAQFRFLERLLLVHGHWCYRRISMMICY 927 (1191)
Q Consensus 849 ~~iV~~l~~~-g~~vl~iGDG~ND~~ml~~AdvGI~i~g~e~~~a~~~aD~vl~~f~~l~~lll~~GR~~~~~i~~~i~~ 927 (1191)
+++|+.+|+. |++|+|||||+||++||++||||||++|+|+.||+.+|||++.+|++|.++|++|||++|+|+++++.|
T Consensus 757 ~~IV~~lk~~~~~~vl~iGDG~ND~~mlk~AdVGIgi~g~eg~qA~~aaD~~i~~F~~L~~lll~~GR~~~~r~~~~i~~ 836 (1057)
T TIGR01652 757 ADVVRLVKKSTGKTTLAIGDGANDVSMIQEADVGVGISGKEGMQAVMASDFAIGQFRFLTKLLLVHGRWSYKRISKMILY 836 (1057)
T ss_pred HHHHHHHHhcCCCeEEEEeCCCccHHHHhhcCeeeEecChHHHHHHHhhhhhhhhHHHHHHHHHhhCHHHHHHHHHHHHH
Confidence 9999999776 999999999999999999999999999999999999999999999999999889999999999999999
Q ss_pred HHHhHHHHHHHHHHHHhhhccccccchhHHHHHHHHHHhhhhhHHhhhcccccCChhhhhcCccchhccccCCccchhhH
Q 001008 928 FFYKNLTFGFTLFWYEAYASFSGRPAYNDWYMSCYNVFFTSLPVIALGVFDQDVSARLCLKYPLLYQEGVQNILFSWPRI 1007 (1191)
Q Consensus 928 ~~~~n~~~~~~~~~~~~~~~~s~~~~~~~~~~l~~n~~~~~~p~~~l~~~~~d~~~~~~~~~P~ly~~~~~~~~~~~~~~ 1007 (1191)
.||||+++++++++|.++++|+|+++|++++++|||+++|++|++++|++|+|++++.++++|++|+.++++..++.+.|
T Consensus 837 ~~~kn~~~~~~~~~~~~~~~~s~~~~~~~~~l~~~n~~~t~lp~~~l~~~d~~~~~~~l~~~P~ly~~~~~~~~~~~~~f 916 (1057)
T TIGR01652 837 FFYKNLIFAIIQFWYSFYNGFSGQTLYEGWYMVLYNVFFTALPVISLGVFDQDVSASLSLRYPQLYREGQKGQGFSTKTF 916 (1057)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHhHHHHHHHHhcccCCHHHHHhChHHHHHhhhcCCCCHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhHhHHHHHHHHHHHHHhhhccccccCCCcceehhhhhhHHhhHHHHHHHHHHHhhhccchhhHHHHHHHHHHHHHHH
Q 001008 1008 LGWMSNGVLSAIIIFFFTTNSIFNQAFRKDGHAVDYEVLGVAMYSSVVWAVNCQMALSINYFTWIQHFFIWGSIALWYIF 1087 (1191)
Q Consensus 1008 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~f~~~v~~~~~~~~l~~~~~~~~~~~~i~~si~~~~i~ 1087 (1191)
+.|++.|++|++++|++.++.+.......+|...+++.+++++|+++++++|+++++.+++|+|+++.++|+|+++++++
T Consensus 917 ~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wt~~~~~~~~~S~~~~~~~ 996 (1057)
T TIGR01652 917 WGWMLDGIYQSLVIFFFPMFAYILGDFVSSGSLDDFSSVGVIVFTALVVIVNLKIALEINRWNWISLITIWGSILVWLIF 996 (1057)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCccccCCcccchhhHHHHHHHHHHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999888876544446888889999999999999999999999999999999999999999999999
Q ss_pred HHHHhcCCCCCcchhHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHH
Q 001008 1088 LVVYGSLPPTFSTTAYKVLVEACAPSILYWLTTLLVVVSTLLPYFLYRAFQTRFRPMYHDLIQR 1151 (1191)
Q Consensus 1088 ~~i~~~~~~~~~~~~~~~~~~~~~~s~~~wl~~l~~~~~~ll~~~i~k~~~~~~~P~~~~i~~e 1151 (1191)
.+++..++. +...|+ .+.....+|.||+.++++++++++|+++++++++.|+|+.++++||
T Consensus 997 ~~~~~~~~~--~~~~~~-~~~~~~~s~~f~l~~ll~~~~~l~p~~~~~~~~~~~~P~~~~~i~~ 1057 (1057)
T TIGR01652 997 VIVYSSIFP--SPAFYK-AAPRVMGTFGFWLVLLVIVLISLLPRFTYKAIQRLFRPPDYDIVQE 1057 (1057)
T ss_pred HHHHHhhcc--cccHHH-HHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHhhC
Confidence 988886542 334455 4446778999999999999999999999999999999999999875
No 4
>KOG0210 consensus P-type ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.4e-154 Score=1283.63 Aligned_cols=980 Identities=33% Similarity=0.529 Sum_probs=859.0
Q ss_pred eEEEeCCCCCccccccCCCCceeecCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHhccc-CCcCCCchhhHHHHHHHHH
Q 001008 38 RVVYCNDPDNPEVVQLNYRGNYVSTTKYTAANFIPKSLFEQFRRVANIYFLVVAFVSFSP-LAPYSAPSVLAPLIVVIGA 116 (1191)
Q Consensus 38 r~~~~n~~~~~~~~~~~~g~N~i~~~k~~~~~flp~~l~~qf~~~~n~~fl~~~il~~~~-~~~~~~~~~~~~l~~vl~~ 116 (1191)
|.+.+.... ..++.+|++|.++..||.+++|+|..|++||+.+.|+|||++++.|++| +......+++.|+.+++++
T Consensus 64 rt~~~~~~~--~~~~~r~~pn~v~nqKyn~~tF~p~vl~~qF~~F~nlyfll~alsQ~ip~~~ig~l~ty~~pl~fvl~i 141 (1051)
T KOG0210|consen 64 RTVNISFGP--HYRRRRFPPNEVRNQKYNIFTFVPAVLFEQFKFFLNLYFLLVALSQLIPALKIGYLSTYWGPLGFVLTI 141 (1051)
T ss_pred ceeecccCC--CcccccCCCchhhhcccceEEeeHHHHHHHHHHHHHHHHHHHHHHhhCchheecchhhhhHHHHHHHHH
Confidence 555444422 2356789999999999999999999999999999999999999999999 4443467889999999999
Q ss_pred HHHHHHHHHHHHhhhHHHHhcceEEEEecCCeEEEEeccccccccEEEEeCCCcccceEEEEeeeCCCceEEEEeccCCc
Q 001008 117 TMAKEGVEDWRRRKQDIEANNRKVKVYGQDHTFVETKWKNLRVGDLVKVHKDEYFPADLLLLSSIYEDGICYVETMNLDG 196 (1191)
Q Consensus 117 ~~i~~~~~d~~r~k~~~~~n~~~~~V~r~~g~~~~i~~~~L~vGDIV~l~~ge~iPaD~~lL~ss~~~g~~~Vd~s~LtG 196 (1191)
++++|+++|++|++.|++.|+.+++++.++|...+ ++++|+|||+|++++||+||||+++|.+|+++|.|+|.|..|||
T Consensus 142 tl~keavdd~~r~~rd~~~Nse~y~~ltr~~~~~~-~Ss~i~vGDvi~v~K~~RVPADmilLrTsd~sg~~FiRTDQLDG 220 (1051)
T KOG0210|consen 142 TLIKEAVDDLKRRRRDRELNSEKYTKLTRDGTRRE-PSSDIKVGDVIIVHKDERVPADMILLRTSDKSGSCFIRTDQLDG 220 (1051)
T ss_pred HHHHHHHHHHHHHHhhhhhhhhhheeeccCCcccc-cccccccccEEEEecCCcCCcceEEEEccCCCCceEEeccccCC
Confidence 99999999999999999999999999964665544 99999999999999999999999999999999999999999999
Q ss_pred ccccEeecchhhhcccCChhhhcccceEEEeecCCCCceeeEEEEEEcC--eeeccCCCceeecCcEeecCCeEEEEEEE
Q 001008 197 ETNLKLKRSLEATNHLRDEESFQKFTAVIKCEDPNERLYSFVGTLQYEG--KQYPLSPQQILLRDSKLKNTDYVYGVVVF 274 (1191)
Q Consensus 197 Es~~~~K~~~~~~~~~~~~~~~~~~~~~i~~e~pn~~~~~f~Gt~~~~g--~~~~l~~~n~l~rgs~l~nt~~~~gvVv~ 274 (1191)
||++|.|-|++.++++.....+..++ |..|+|+++++.|-|++.+.. +..+++.+|.+|.++.+.+.+ ++|+|+|
T Consensus 221 ETDWKLrl~vp~tQ~l~~~~el~~i~--v~Ae~P~kdIh~F~Gt~~~~d~~~~~~LsventLWanTVvAs~t-~~gvVvY 297 (1051)
T KOG0210|consen 221 ETDWKLRLPVPRTQHLTEDSELMEIS--VYAEKPQKDIHSFVGTFTITDSDKPESLSVENTLWANTVVASGT-AIGVVVY 297 (1051)
T ss_pred cccceeeccchhhccCCcccchheEE--EeccCcchhhHhhEEEEEEecCCCCCcccccceeeeeeeEecCc-EEEEEEE
Confidence 99999999999999988877777666 889999999999999999954 357999999999999998754 9999999
Q ss_pred ecchhhHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcccccCCCccccccccCCCCCcccCCCCch
Q 001008 275 TGHDTKVMQNATDPPSKRSKIERKMDKIVYLLFSTLILISSTGSVFFGIETKRDIDGGKIRRWYLQPDDATVFYDPRRAP 354 (1191)
Q Consensus 275 tG~~Tki~~~~~~~~~k~s~l~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 354 (1191)
||.||+-+||...++.|-..++.++|-+.++++.++++++++...+.++ . ..||+
T Consensus 298 TG~dtRsvMNts~pr~KvGllelEiN~ltKiL~~~vlvLs~vmv~~~g~----~------~~wyi--------------- 352 (1051)
T KOG0210|consen 298 TGRDTRSVMNTSRPRSKVGLLELEINGLTKILFCFVLVLSIVMVAMKGF----G------SDWYI--------------- 352 (1051)
T ss_pred ecccHHHHhccCCcccccceeeeecccHHHHHHHHHHHHHHHHHHhhcC----C------CchHH---------------
Confidence 9999999999999999999999999999999999888887765443322 1 16875
Q ss_pred hHHHHHHHHHHHHhhccccchhhhHHHHHHHHHHHHHhhcccccccCCCCCccccCccccccccceeEEEecCCCccccc
Q 001008 355 LAAFLHFLTGLMLYGYLIPISLYISIEIVKVLQSVFINHDRDMYYEDTDKPARARTSNLNEELGQVDTILSDKTGTLTCN 434 (1191)
Q Consensus 355 ~~~~~~~~~~i~ll~~~iP~sL~v~~~~~~~~~~~~i~~d~~m~~~~~~~~~~v~~~~~~e~Lg~v~~i~~DKTGTLT~n 434 (1191)
.+++++.+++.+||++|-+.+++++.+.++.+.+|.++ .+..+|++++.|+||+|+|+.+|||||||+|
T Consensus 353 -----~~~RfllLFS~IIPISLRvnlDmaK~~ys~~i~~D~~I------pgtvvRSstIPEeLGRIsylLtDKTGTLTqN 421 (1051)
T KOG0210|consen 353 -----YIIRFLLLFSSIIPISLRVNLDMAKIVYSWQIEHDKNI------PGTVVRSSTIPEELGRISYLLTDKTGTLTQN 421 (1051)
T ss_pred -----HHHHHHHHHhhhceeEEEEehhHHHhhHhhhcccCCCC------CceeeecCCChHHhcceEEEEecCcCccccc
Confidence 79999999999999999999999999999999988855 6789999999999999999999999999999
Q ss_pred eeEEEEEEEcCeeeccchhH-HHHHHHHhhCCcccccCCCCCCCCCCCCccccCCCccCCcccCChhhhcccCCCCCChH
Q 001008 435 SMEFVKCSVAGVAYGRVMTE-VERTLAKRKGERTFEVDDSQTDAPGLNGNIVESGKSVKGFNFRDERIMNGQWVNEPHSD 513 (1191)
Q Consensus 435 ~m~~~~~~i~~~~y~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 513 (1191)
+|++++++.|...|+.+..+ ++..+.+-...+.. ..++. ....+.+.+.
T Consensus 422 EM~~KKiHLGTv~~s~e~~~eV~~~i~s~~~~~~~---------------------~~~~~---------~~~~k~~~s~ 471 (1051)
T KOG0210|consen 422 EMEFKKIHLGTVAYSAETMDEVSQHIQSLYTPGRN---------------------KGKGA---------LSRVKKDMSA 471 (1051)
T ss_pred hheeeeeeeeeeeccHhHHHHHHHHHHHhhCCCcc---------------------ccccc---------chhhcCcccH
Confidence 99999999999999865332 22222111110000 00000 0112234566
Q ss_pred HHHHHHHHHhhhccceeccCCCCCceEEecCCccHHHHHHHHHHcCcEEEeecCCeeEEEecCCCCccccceEEEEeEee
Q 001008 514 VIQKFFRVLAICHTAIPDVNEETGEISYEAESPDEAAFVIAAREVGFQFFGSSQTSISLHELDPVSGQKVNRVYELLHVL 593 (1191)
Q Consensus 514 ~~~~~~~~lalC~~~~~~~~~~~~~~~y~~~sp~e~Alv~~a~~~g~~~~~~~~~~~~i~~~~~~~~~~~~~~~~il~~~ 593 (1191)
..++..+++|+||+|.|..++ .+...|++.||||.|||++.+..|..+..|+.+.+.+...+. ....|++|.++
T Consensus 472 rv~~~V~alalCHNVTPv~e~-~ge~sYQAaSPDEVAiVkwTe~VGl~L~~Rd~~~itL~~~~~-----~~~~yqIL~vF 545 (1051)
T KOG0210|consen 472 RVRNAVLALALCHNVTPVFED-DGEVSYQAASPDEVAIVKWTETVGLKLAKRDRHAITLRVPLD-----DELNYQILQVF 545 (1051)
T ss_pred HHHHHHHHHHHhccCCcccCC-CceEEeecCCCCeEEEEEeeeecceEEeecccceEEEecCCC-----cceeEEEEEEe
Confidence 788999999999999997654 468999999999999999999999999999999999987644 47899999999
Q ss_pred cccCCCceEEEEEEcC-CCcEEEEEeccchHHHHHHhhcChhhHHHHHHHHHHHHhccceEEEEEEEecCHHHHHHHHHH
Q 001008 594 EFTSSRKRMSVMVRNP-ENQLLLLCKGADSVMFERLSKHGQQFEAETRRHINRYAEAGLRTLVIAYRELGEDEYRIWEKE 672 (1191)
Q Consensus 594 ~F~s~rkrmsviv~~~-~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~l~~~a~~GlR~L~~A~r~l~~~~~~~~~~~ 672 (1191)
||+|++|||++|||++ .+++.+|.||||.+|...... .+++++....+|++|+|||++|+|.|+++||+.|...
T Consensus 546 PFtsEtKRMGIIVr~e~~~evtfylKGAD~VMs~iVq~-----NdWleEE~gNMAREGLRtLVvakK~Ls~~eye~Fe~~ 620 (1051)
T KOG0210|consen 546 PFTSETKRMGIIVRDETTEEVTFYLKGADVVMSGIVQY-----NDWLEEECGNMAREGLRTLVVAKKVLSEEEYEAFEEA 620 (1051)
T ss_pred ccccccceeeEEEecCCCceEEEEEecchHHHhccccc-----chhhhhhhhhhhhhcceEEEEEecccCHHHHHHHHHH
Confidence 9999999999999997 789999999999999776644 3577888899999999999999999999999999999
Q ss_pred HHHHhhcchhhHHHHHHHHHH-HhhccceEEEeeeecccccCCcHHHHHHHHHcCCeEEEEeCCCHhhHHHHHHHcCccc
Q 001008 673 FLKAKTSVTSDREALVASAAE-KIERDLILLGATAVEDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLR 751 (1191)
Q Consensus 673 ~~~a~~~l~~~r~~~~~~~~~-~iE~dl~llG~~~ieD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gl~~ 751 (1191)
|+.|+.++ .||++++.++.+ .+|+||+++|++|+||+||++|+.+++.||+|||||||+|||+.|||+.||++.+++.
T Consensus 621 y~~A~lSi-~dR~~~ma~vv~~~LE~dlelL~LTGVEDkLQ~dVk~tLElLRNAgikiWMLTGDKlETA~ciAkSs~L~s 699 (1051)
T KOG0210|consen 621 YNAAKLSI-SDRDQKMANVVERYLERDLELLGLTGVEDKLQDDVKPTLELLRNAGIKIWMLTGDKLETAICIAKSSRLFS 699 (1051)
T ss_pred HHhhhCcc-chHHHHHHHHHHHHHHhhhHHhcccChHHHHhhhhHhHHHHHhhcCcEEEEEcCcchhheeeeehhcccee
Confidence 99999999 899999999888 9999999999999999999999999999999999999999999999999999999999
Q ss_pred cCceEEEEecCCchhhhhhhhcchHHHHHHHHHHHHHHHHhhcccccccccccceeEEEEeCchhhHHhHHHHHHHHHHH
Q 001008 752 QEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDL 831 (1191)
Q Consensus 752 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~l 831 (1191)
.++.+..+..-+...... ..++ .-....+.+++|+|+++..+++ ++++.|.++
T Consensus 700 R~q~ihv~~~v~sr~dah------~eL~--------------------~lR~k~~~aLvi~G~Sl~~cl~-yye~Ef~el 752 (1051)
T KOG0210|consen 700 RGQYIHVIRSVTSRGDAH------NELN--------------------NLRRKTDCALVIDGESLEFCLK-YYEDEFIEL 752 (1051)
T ss_pred cCceEEEEEecCCchHHH------HHHH--------------------HhhcCCCcEEEEcCchHHHHHH-HHHHHHHHH
Confidence 999988887654322110 0000 0013456789999999998885 788999999
Q ss_pred HhhcCceEEEcCChhhHHHHHHHh-hcCCCEEEEEcCCccChHhhhhcceeEEeccCccchhhhccceeccchhhhhHhh
Q 001008 832 AIDCASVICCRSSPKQKALVTRLV-KGTGKTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAIAQFRFLERLL 910 (1191)
Q Consensus 832 ~~~~~~~v~~r~sP~qK~~iV~~l-~~~g~~vl~iGDG~ND~~ml~~AdvGI~i~g~e~~~a~~~aD~vl~~f~~l~~ll 910 (1191)
++.|.++||||++|.||+++++++ ++.|+.|++||||.||++|+|+||+|||+-|+||.||..||||+|++|+++.+||
T Consensus 753 ~~~~~aVv~CRctPtQKA~v~~llq~~t~krvc~IGDGGNDVsMIq~A~~GiGI~gkEGkQASLAADfSItqF~Hv~rLL 832 (1051)
T KOG0210|consen 753 VCELPAVVCCRCTPTQKAQVVRLLQKKTGKRVCAIGDGGNDVSMIQAADVGIGIVGKEGKQASLAADFSITQFSHVSRLL 832 (1051)
T ss_pred HHhcCcEEEEecChhHHHHHHHHHHHhhCceEEEEcCCCccchheeecccceeeecccccccchhccccHHHHHHHHHHh
Confidence 999999999999999999999999 7789999999999999999999999999999999999999999999999999999
Q ss_pred hhhchhhhhHhhHhHHHHHHhHHHHHHHHHHHHhhhccccccchhHHHHHHHHHHhhhhhHHhhhcccccCChhhhhcCc
Q 001008 911 LVHGHWCYRRISMMICYFFYKNLTFGFTLFWYEAYASFSGRPAYNDWYMSCYNVFFTSLPVIALGVFDQDVSARLCLKYP 990 (1191)
Q Consensus 911 l~~GR~~~~~i~~~i~~~~~~n~~~~~~~~~~~~~~~~s~~~~~~~~~~l~~n~~~~~~p~~~l~~~~~d~~~~~~~~~P 990 (1191)
++|||.+|.|.+++.+|.+.+++++..++..|.....|...++|..+.|..|..++|++|++.+ +.|+|+++...+.+|
T Consensus 833 l~HGR~SYkrsa~laqfViHRGL~Is~~Qavfs~v~yF~~V~LyqG~LmvgysT~YTmlPVFSl-v~d~Dv~~~~a~~yP 911 (1051)
T KOG0210|consen 833 LWHGRNSYKRSAKLAQFVIHRGLIISTMQAVFSSVFYFAPVALYQGFLMVGYSTCYTMLPVFSL-VLDRDVSESLAVLYP 911 (1051)
T ss_pred hccccchHHHHHHHHHHHHhhhHHHHHHHHHHHHHhhhcchHHhhhhHHHHHHHHHHHhhhhee-eecccccHHHHhhhH
Confidence 9999999999999999999999999999999999999999999999999999999999999999 779999999999999
Q ss_pred cchhccccCCccchhhHHHhhHhHHHHHHHHHHHHHhhhccccccCCCcceehhhhhhHHhhHHHHHHHHHHHhhhccch
Q 001008 991 LLYQEGVQNILFSWPRILGWMSNGVLSAIIIFFFTTNSIFNQAFRKDGHAVDYEVLGVAMYSSVVWAVNCQMALSINYFT 1070 (1191)
Q Consensus 991 ~ly~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~f~~~v~~~~~~~~l~~~~~~ 1070 (1191)
+||+.-.+++.++.++|+.|++.++||+.++.++.+..+.. ++....++.|+++++...+++++..++|+
T Consensus 912 ELYKeL~kgr~lSYKtF~iwvLISiYQG~vim~g~~~l~~~----------ef~~ivaisFtaLi~tELiMVaLtv~tw~ 981 (1051)
T KOG0210|consen 912 ELYKELTKGRSLSYKTFFIWVLISIYQGSVIMYGALLLFDT----------EFIHIVAISFTALILTELIMVALTVRTWH 981 (1051)
T ss_pred HHHHHHhcCCccchhhhhhhhhHHHHcccHHHHHHHHHhhh----------hheEeeeeeeHHHHHHHHHHHhhhhhhhh
Confidence 99999999999999999999999999999999887666543 22345688999999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhcCCCCCcchhHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHH
Q 001008 1071 WIQHFFIWGSIALWYIFLVVYGSLPPTFSTTAYKVLVEACAPSILYWLTTLLVVVSTLLPYFLYRAFQTRFRPMYHDLIQ 1150 (1191)
Q Consensus 1071 ~~~~~~i~~si~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~s~~~wl~~l~~~~~~ll~~~i~k~~~~~~~P~~~~i~~ 1150 (1191)
|.....-..|+.++++...+...+ +. .....++.|++.+..+.+++++|.++.|+++|++.|+.|.+++
T Consensus 982 ~~m~vae~lsL~~Yivsl~~l~~y--------fd---~~f~~~~~Fl~k~t~I~~vS~Lpl~~~K~lrrk~sPpSYaKl~ 1050 (1051)
T KOG0210|consen 982 WLMVVAELLSLALYIVSLAFLHEY--------FD---RYFILTYVFLWKVTVITLVSCLPLYFIKALRRKLSPPSYAKLQ 1050 (1051)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhH--------HH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcchhhcc
Confidence 999888888888887766543321 11 1233567788888888899999999999999999999998875
No 5
>KOG0202 consensus Ca2+ transporting ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=5.9e-116 Score=1006.53 Aligned_cols=891 Identities=21% Similarity=0.264 Sum_probs=689.8
Q ss_pred CccccccCCCCceeecCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHhcccCCcCCCchhhHHHHHHHHHHHHHHHHHHH
Q 001008 47 NPEVVQLNYRGNYVSTTKYTAANFIPKSLFEQFRRVANIYFLVVAFVSFSPLAPYSAPSVLAPLIVVIGATMAKEGVEDW 126 (1191)
Q Consensus 47 ~~~~~~~~~g~N~i~~~k~~~~~flp~~l~~qf~~~~n~~fl~~~il~~~~~~~~~~~~~~~~l~~vl~~~~i~~~~~d~ 126 (1191)
+..+|++.||.|++....-..++ +.+++||.++...++|++++++++. .+|...+.+.++++++++..++++|
T Consensus 28 ev~~r~~~yG~Nel~~ee~~~~w---k~vLeQF~n~Li~iLL~sA~ISfvl----~~~~e~~vI~liiv~nvtVG~~QEy 100 (972)
T KOG0202|consen 28 EVTRRRKKYGENELPAEEGESLW---KLVLEQFDNPLILILLLSAAISFVL----ADFDEPFVITLIIVINVTVGFVQEY 100 (972)
T ss_pred HHHHHHHhcCCccCccccCCcHH---HHHHHHHHhHHHHHHHHHHHHHHHH----Hhcccceeeeeeeeeeeeeeeeeeh
Confidence 34578899999999988766554 9999999999999999999999985 2333444455667777788889999
Q ss_pred HHhhhHHHHh---cceEEEEecCCeEEEEeccccccccEEEEeCCCcccceEEEEeeeCCCceEEEEeccCCcccccEee
Q 001008 127 RRRKQDIEAN---NRKVKVYGQDHTFVETKWKNLRVGDLVKVHKDEYFPADLLLLSSIYEDGICYVETMNLDGETNLKLK 203 (1191)
Q Consensus 127 ~r~k~~~~~n---~~~~~V~r~~g~~~~i~~~~L~vGDIV~l~~ge~iPaD~~lL~ss~~~g~~~Vd~s~LtGEs~~~~K 203 (1191)
+..|+..+++ +..++|+| +|+.+.+++++|+|||||.|+-||+||||++|++..+ +.||||+|||||.|+.|
T Consensus 101 ~aEkalEaLk~l~p~~~~V~R-~gk~~~i~A~eLVPGDiV~l~vGDkVPADlRl~e~~s----l~iDeS~LTGEs~pv~K 175 (972)
T KOG0202|consen 101 NAEKALEALKELVPPMAHVLR-SGKLQHILARELVPGDIVELKVGDKIPADLRLIEAKS----LRIDESSLTGESEPVSK 175 (972)
T ss_pred hhHHHHHHHHhcCCccceEEe-cCcccceehhccCCCCEEEEecCCccccceeEEeeee----eeeecccccCCcccccc
Confidence 9998866665 78999999 9999999999999999999999999999999999987 89999999999999999
Q ss_pred cchhhhcccCChhhhcccceEEEeecCCCCceeeEEEEEEcCeeeccCCCceeecCcEeecCCeEEEEEEEecchhhHh-
Q 001008 204 RSLEATNHLRDEESFQKFTAVIKCEDPNERLYSFVGTLQYEGKQYPLSPQQILLRDSKLKNTDYVYGVVVFTGHDTKVM- 282 (1191)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~i~~e~pn~~~~~f~Gt~~~~g~~~~l~~~n~l~rgs~l~nt~~~~gvVv~tG~~Tki~- 282 (1191)
.......+. .++..++....|+||.+..|+ +.|+|+.||.+|.++
T Consensus 176 ~t~~v~~~~-------------~~~~~dk~NiaFsGT~V~~G~---------------------a~GIVi~TG~nTeiG~ 221 (972)
T KOG0202|consen 176 DTDAVPKDE-------------NADVQDKKNIAFSGTLVVAGR---------------------AKGIVIGTGLNTEIGK 221 (972)
T ss_pred cCccccCCC-------------CCccccceeeEeecceeecCc---------------------eeEEEEeccccchHHH
Confidence 764433100 011122333668888888887 999999999999663
Q ss_pred --hccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHh-hhhhcccccCCCccccccccCCCCCcccCCCCchhHHHH
Q 001008 283 --QNATDPPSKRSKIERKMDKIVYLLFSTLILISSTGSVF-FGIETKRDIDGGKIRRWYLQPDDATVFYDPRRAPLAAFL 359 (1191)
Q Consensus 283 --~~~~~~~~k~s~l~~~~~~~~~~~~~~~~~~~~i~~i~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 359 (1191)
......+..++|+|++++.+...+..++.++|+..+++ .+++...... ..|+ .....
T Consensus 222 I~~~m~~~e~~kTPLqk~ld~~G~qLs~~is~i~v~v~~~nig~f~~p~~~----g~~f----------------k~~~~ 281 (972)
T KOG0202|consen 222 IFKMMQATESPKTPLQKKLDEFGKQLSKVISFICVGVWLLNIGHFLDPVHG----GSWF----------------KGALY 281 (972)
T ss_pred HHHHHhccCCCCCcHHHHHHHHHHHHHHHheehhhhHHHhhhhhhcccccc----ccch----------------hchhh
Confidence 22334466689999999999999986666666665555 2222210000 0232 23455
Q ss_pred HHHHHHHHhhccccchhhhHHHHHHHHHHHHHhhcccccccCCCCCccccCccccccccceeEEEecCCCccccceeEEE
Q 001008 360 HFLTGLMLYGYLIPISLYISIEIVKVLQSVFINHDRDMYYEDTDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFV 439 (1191)
Q Consensus 360 ~~~~~i~ll~~~iP~sL~v~~~~~~~~~~~~i~~d~~m~~~~~~~~~~v~~~~~~e~Lg~v~~i~~DKTGTLT~n~m~~~ 439 (1191)
.|..+++|.+++||+|||+.+++..+++..+| ++++++||.+..+|+||.+++||||||||||+|+|.+.
T Consensus 282 ~f~IaVsLAVAAIPEGLPaVvT~tLALG~~rM----------akknaIVRkLPsVETLGc~~VICSDKTGTLTtN~Mtv~ 351 (972)
T KOG0202|consen 282 YFKIAVSLAVAAIPEGLPAVVTTTLALGTRRM----------AKKNAIVRKLPSVETLGCVNVICSDKTGTLTTNQMTVS 351 (972)
T ss_pred hhhHHHHHHHHhccCCCcchhhhhHHHhHHHH----------HhhhhhhhcccchhhccceeEEecCCCCcccccceEEE
Confidence 78889999999999999999999999999987 89999999999999999999999999999999999999
Q ss_pred EEEEcCeeeccchhHHHHHHHHhhCCcccccCCCCCCCCCCCCccccCCCccCCcccCChhhhcccCCCCCChHHHHHHH
Q 001008 440 KCSVAGVAYGRVMTEVERTLAKRKGERTFEVDDSQTDAPGLNGNIVESGKSVKGFNFRDERIMNGQWVNEPHSDVIQKFF 519 (1191)
Q Consensus 440 ~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 519 (1191)
++++.+..+... ++- .-.+..++ ..+-.+.+.. .........+.+++++
T Consensus 352 ~i~~~~~~~~~~-~~f-----~~tg~ty~----------------------~~g~v~~~~~---~~~~~~~~~~~l~~l~ 400 (972)
T KOG0202|consen 352 KIFIPDGGTATV-DEF-----NPTGTTYS----------------------PEGEVFKDGL---YEKDKAGDNDLLQELA 400 (972)
T ss_pred EEEecccccccc-ccc-----ccCCceeC----------------------CCCceEecCc---cccccccccHHHHHHH
Confidence 999877654321 000 00000000 0000000000 0001123456788999
Q ss_pred HHHhhhccceeccCCCCCceEEecCCccHHHHHHHHHHcCcEEEeecCCeeEEEecCCCCccccceEEEEeEeecccCCC
Q 001008 520 RVLAICHTAIPDVNEETGEISYEAESPDEAAFVIAAREVGFQFFGSSQTSISLHELDPVSGQKVNRVYELLHVLEFTSSR 599 (1191)
Q Consensus 520 ~~lalC~~~~~~~~~~~~~~~y~~~sp~e~Alv~~a~~~g~~~~~~~~~~~~i~~~~~~~~~~~~~~~~il~~~~F~s~r 599 (1191)
.+.++||.+...+++. +.++- .+.|+|.||..+|++.|+.-...... .-.+ +....+...+.++...++||+|+|
T Consensus 401 ~i~~lCNda~v~~~~~-~~~~~-~G~pTE~AL~vlaeKm~l~~~~~~~~--s~~~-~~~c~~~~~~~~~~~~elpFssdr 475 (972)
T KOG0202|consen 401 EICALCNDATVEYNDA-DCYEK-VGEPTEGALIVLAEKMGLPGTRSTNL--SNEE-ASACNRVYSRLFKKIAELPFSSDR 475 (972)
T ss_pred HHHHhhhhhhhhcCch-hhHHh-cCCchHHHHHHHHHHcCCCcchhhcc--cccc-cccchhHHHHhhhheeEeeccccc
Confidence 9999999998877664 33332 37999999999999999864331100 0000 112222335667778999999999
Q ss_pred ceEEEEEEcCCCc--EEEEEeccchHHHHHHhhc-----------ChhhHHHHHHHHHHHHhccceEEEEEEEecCHH--
Q 001008 600 KRMSVMVRNPENQ--LLLLCKGADSVMFERLSKH-----------GQQFEAETRRHINRYAEAGLRTLVIAYRELGED-- 664 (1191)
Q Consensus 600 krmsviv~~~~~~--~~l~~KGa~~~i~~~~~~~-----------~~~~~~~~~~~l~~~a~~GlR~L~~A~r~l~~~-- 664 (1191)
|+|||.+.++.++ +.+|+|||+|.|+++|+.. .+..++.+.+...+++++|||+|++|+++.+..
T Consensus 476 K~Msv~c~~~~~~~~~~~fvKGA~E~Vl~rcs~~~~~~g~~~~pLt~~~re~il~~~~~~g~~gLRvLalA~~~~~~~~~ 555 (972)
T KOG0202|consen 476 KSMSVKCSPAHGQSGYKMFVKGAPESVLERCSTYYGSDGQTKVPLTQASRETILANVYEMGSEGLRVLALASKDSPGQVP 555 (972)
T ss_pred ceEEEEEecCCCCccceEEecCChHHHHHhhhcEEccCCceeeeCcHHHHHHHHHHHHHHhhccceEEEEEccCCcccCh
Confidence 9999999987664 8999999999999999653 234678899999999999999999999977641
Q ss_pred -HHHHHHHHHHHHhhcchhhHHHHHHHHHHHhhccceEEEeeeecccccCCcHHHHHHHHHcCCeEEEEeCCCHhhHHHH
Q 001008 665 -EYRIWEKEFLKAKTSVTSDREALVASAAEKIERDLILLGATAVEDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINI 743 (1191)
Q Consensus 665 -~~~~~~~~~~~a~~~l~~~r~~~~~~~~~~iE~dl~llG~~~ieD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~i 743 (1191)
+-+.| ....+...|+||+|+|++|+.||+|++|+++|+.|++|||+|.|+|||+.+||.+|
T Consensus 556 ~~~~l~------------------~~s~~~~~E~~LtFvGlVGi~DPPR~ev~~ai~~c~~aGIrV~mITGD~~~TA~AI 617 (972)
T KOG0202|consen 556 DDQDLN------------------DTSNRATAESDLTFVGLVGILDPPRPEVADAIELCRQAGIRVIMITGDNKETAEAI 617 (972)
T ss_pred hhhhhc------------------ccccccccccceEEEEEeeccCCCchhHHHHHHHHHHcCCEEEEEcCCCHHHHHHH
Confidence 10100 00123577899999999999999999999999999999999999999999999999
Q ss_pred HHHcCccccCceEEEEecCCchhhhhhhhcchHHHHHHHHHHHHHHHHhhcccccccccccceeEEEEeCchhhHHhHHH
Q 001008 744 GYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQIREGISQVNSAKESKVTFGLVIDGKSLDFALDKK 823 (1191)
Q Consensus 744 a~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~ 823 (1191)
|+++|+...+..+ ....++|.+++.+-+++
T Consensus 618 ~r~iGi~~~~ed~--------------------------------------------------~~~~~TG~efD~ls~~~ 647 (972)
T KOG0202|consen 618 AREIGIFSEDEDV--------------------------------------------------SSMALTGSEFDDLSDEE 647 (972)
T ss_pred HHHhCCCcCCccc--------------------------------------------------cccccchhhhhcCCHHH
Confidence 9999987654220 12367888888766655
Q ss_pred HHHHHHHHHhhcCceEEEcCChhhHHHHHHHhhcCCCEEEEEcCCccChHhhhhcceeEEe--ccCccchhhhccceecc
Q 001008 824 LEKMFLDLAIDCASVICCRSSPKQKALVTRLVKGTGKTTLAIGDGANDVGMLQEADIGVGI--SGVEGMQAVMSSDYAIA 901 (1191)
Q Consensus 824 ~~~~~~~l~~~~~~~v~~r~sP~qK~~iV~~l~~~g~~vl~iGDG~ND~~ml~~AdvGI~i--~g~e~~~a~~~aD~vl~ 901 (1191)
+.+... +..+|+|++|++|.+||+.||+.|++|+|+|||.||+|+||.||||||| +|+++ |++|||+|+.
T Consensus 648 ~~~~~~------~~~vFaR~~P~HK~kIVeaLq~~geivAMTGDGVNDApALK~AdIGIAMG~~GTdV--aKeAsDMVL~ 719 (972)
T KOG0202|consen 648 LDDAVR------RVLVFARAEPQHKLKIVEALQSRGEVVAMTGDGVNDAPALKKADIGIAMGISGTDV--AKEASDMVLA 719 (972)
T ss_pred HHHHhh------cceEEEecCchhHHHHHHHHHhcCCEEEecCCCccchhhhhhcccceeecCCccHh--hHhhhhcEEe
Confidence 554443 4569999999999999999999999999999999999999999999987 57787 9999999999
Q ss_pred chhh--hhHhhhhhchhhhhHhhHhHHHHHHhHHHHHHHHHHHHhhhccccccchhHHHHHHHHHHhhhhhHHhhhcccc
Q 001008 902 QFRF--LERLLLVHGHWCYRRISMMICYFFYKNLTFGFTLFWYEAYASFSGRPAYNDWYMSCYNVFFTSLPVIALGVFDQ 979 (1191)
Q Consensus 902 ~f~~--l~~lll~~GR~~~~~i~~~i~~~~~~n~~~~~~~~~~~~~~~~s~~~~~~~~~~l~~n~~~~~~p~~~l~~~~~ 979 (1191)
|++| +..+ +.+||.+|.|+++++.|.+..|+..+.+.++...+. -..+++++|+||+|++++.+|+.++|+++
T Consensus 720 DDnFstIvaA-VEEGr~IynNik~Fir~~lSsnVgev~~I~l~aa~~---~p~pL~pvQiLWiNlvtDG~PA~aLG~ep- 794 (972)
T KOG0202|consen 720 DDNFSTIVAA-VEEGRAIYNNIKNFIRYLLSSNVGEVVLIFLTAAFG---IPEPLIPVQILWINLVTDGPPATALGFEP- 794 (972)
T ss_pred cCcHHHHHHH-HHHhHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhC---CCCcccchhhheeeeeccCCchhhcCCCC-
Confidence 8554 8888 899999999999999999999999999988887774 33669999999999999999999999976
Q ss_pred cCChhhhhcCccchhccccCCccchhhHHHhhHhHHHHHHHHHHHHHhhhcc--ccccCC----------------Ccce
Q 001008 980 DVSARLCLKYPLLYQEGVQNILFSWPRILGWMSNGVLSAIIIFFFTTNSIFN--QAFRKD----------------GHAV 1041 (1191)
Q Consensus 980 d~~~~~~~~~P~ly~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~--~~~~~~----------------g~~~ 1041 (1191)
++.+.+.+.|+ ..+..+++.+.|+.++..|+|.++.....+.+.+.. +..+.+ ...+
T Consensus 795 -~D~DiM~kpPR----~~~~~iit~~l~~r~l~~g~~vg~~Tv~~f~~~~~~~~~~vt~~~~~~~~~c~~~~~~~~c~~F 869 (972)
T KOG0202|consen 795 -VDPDIMKKPPR----DSKDGIITGWLIFRYLAIGIIVGVATVGVFVWWMYGADGKVTYRQLAHYNSCCRDFYGSRCAVF 869 (972)
T ss_pred -CChhHHhCCCC----CCCCCeeeHHHHHHHHHhheeeeeeEhHhhhHHHhcCCCCcChhhhcchhhhcccccccchhhh
Confidence 55566666666 788999999999999999999988877776655542 111000 0000
Q ss_pred ehhhhhhHHhhHHHHHHHHHHHhhhccch-------hhHHHHHHHHHHHHHHHHHHHhcCCCCCcchhHHHHHHHHhcCH
Q 001008 1042 DYEVLGVAMYSSVVWAVNCQMALSINYFT-------WIQHFFIWGSIALWYIFLVVYGSLPPTFSTTAYKVLVEACAPSI 1114 (1191)
Q Consensus 1042 ~~~~~~~~~f~~~v~~~~~~~~l~~~~~~-------~~~~~~i~~si~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~s~ 1114 (1191)
......||.|+++++.-.+.. +..++++ .+.|.++.+++++.++.+++..|+|+ ++. .|+..++++
T Consensus 870 ~~~~~~tMa~tv~V~~emfNa-L~~~se~~slf~~~~~~N~~l~~ai~~S~~~~f~ilYvp~-l~~-----iFq~~~l~~ 942 (972)
T KOG0202|consen 870 EDMCPLTMALTVLVFIEMFNA-LNCLSENKSLFTMPPWSNRWLLWAIALSFVLHFLVLYVPP-LQR-----IFQTEPLSL 942 (972)
T ss_pred cccccceEEEeehhHHHHHHH-hhcccCCcceEEecccccHHHHHHHHHHHHhhheEEEech-hhh-----hheecCCcH
Confidence 011223778888777654443 4455443 67899999999999999999999996 355 677889999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhcC
Q 001008 1115 LYWLTTLLVVVSTLLPYFLYRAFQTRFR 1142 (1191)
Q Consensus 1115 ~~wl~~l~~~~~~ll~~~i~k~~~~~~~ 1142 (1191)
..|++++.+.+..++.++++|++.|.++
T Consensus 943 ~ew~~vl~~s~~V~i~dEilK~~~R~~~ 970 (972)
T KOG0202|consen 943 AEWLLVLAISSPVIIVDEILKFIARNYF 970 (972)
T ss_pred HHHHHHHHHhhhhhhHHHHHHHHHHhcc
Confidence 9999999999999999999999999775
No 6
>COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=4.1e-114 Score=1093.20 Aligned_cols=826 Identities=28% Similarity=0.390 Sum_probs=656.8
Q ss_pred ccccccCCCCceeecCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHhcccCCcCCCc-hhhHHHHHHHHHHHHHHHHHHH
Q 001008 48 PEVVQLNYRGNYVSTTKYTAANFIPKSLFEQFRRVANIYFLVVAFVSFSPLAPYSAP-SVLAPLIVVIGATMAKEGVEDW 126 (1191)
Q Consensus 48 ~~~~~~~~g~N~i~~~k~~~~~flp~~l~~qf~~~~n~~fl~~~il~~~~~~~~~~~-~~~~~l~~vl~~~~i~~~~~d~ 126 (1191)
..+|++.||.|++...+...+. +.++.||.+++++.++++++++++. ..+... .....++++++++++..+++++
T Consensus 50 ~~~r~~~~G~N~~~~~~~~~~~---~~fl~~f~~~~~~iL~~~a~~s~~~-~~~~~~~~~~~~I~~~i~~n~~~g~~qe~ 125 (917)
T COG0474 50 VKRRLKKYGPNELPEEKKRSLL---KKFLRQFKDPFIILLLVAALLSAFV-GDWVDAGVDAIVILLVVVINALLGFVQEY 125 (917)
T ss_pred HHHHHhhcCCccccccccCcHH---HHHHHHHHHHHHHHHHHHHHHHHHh-hcccccCcceeeehHHHHHHHHHHHHHHH
Confidence 3567889999999977764432 7889999999999999999998874 222111 2333345566666666677777
Q ss_pred HHhhh---HHHHhcceEEEEecCCeEEEEeccccccccEEEEeCCCcccceEEEEeeeCCCceEEEEeccCCcccccEee
Q 001008 127 RRRKQ---DIEANNRKVKVYGQDHTFVETKWKNLRVGDLVKVHKDEYFPADLLLLSSIYEDGICYVETMNLDGETNLKLK 203 (1191)
Q Consensus 127 ~r~k~---~~~~n~~~~~V~r~~g~~~~i~~~~L~vGDIV~l~~ge~iPaD~~lL~ss~~~g~~~Vd~s~LtGEs~~~~K 203 (1191)
+..++ ++++++.+++|+| ||++++|+|++|+|||||+|++||+||||++||++++ .+||||+|||||+|+.|
T Consensus 126 ~a~~~l~~lk~~~~~~~~V~R-~g~~~~i~a~eLVpGDiV~l~~gd~vPAD~rLl~~~~----l~VdEs~LTGES~pv~K 200 (917)
T COG0474 126 RAEKALEALKKMSSPKAKVLR-DGKFVEIPASELVPGDIVLLEAGDVVPADLRLLESSD----LEVDESALTGESLPVEK 200 (917)
T ss_pred HHHHHHHHHHhhccCceEEEe-CCcEEEecHHHCCCCcEEEECCCCccccceEEEEecC----ceEEcccccCCCcchhc
Confidence 77544 6667789999999 9999999999999999999999999999999999885 59999999999999999
Q ss_pred cchhhhcccCChhhhcccceEEEeecCCCCceeeEEEEEEcCeeeccCCCceeecCcEeecCCeEEEEEEEecchhhHhh
Q 001008 204 RSLEATNHLRDEESFQKFTAVIKCEDPNERLYSFVGTLQYEGKQYPLSPQQILLRDSKLKNTDYVYGVVVFTGHDTKVMQ 283 (1191)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~i~~e~pn~~~~~f~Gt~~~~g~~~~l~~~n~l~rgs~l~nt~~~~gvVv~tG~~Tki~~ 283 (1191)
.+..... .|.|.. ++..|++++||.+++ +.+.|+|++||.+|++++
T Consensus 201 ~~~~~~~----------------~~~~~~-----------------~d~~n~l~sGt~V~~-G~~~giVvaTG~~T~~G~ 246 (917)
T COG0474 201 QALPLTK----------------SDAPLG-----------------LDRDNMLFSGTTVVS-GRAKGIVVATGFETEFGK 246 (917)
T ss_pred ccccccc----------------cccccc-----------------CCccceEEeCCEEEc-ceEEEEEEEEcCccHHHH
Confidence 9865441 111110 455777777777776 449999999999998877
Q ss_pred ccCC---CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcccccCCCccccccccCCCCCcccCCCCchhHHHHH
Q 001008 284 NATD---PPSKRSKIERKMDKIVYLLFSTLILISSTGSVFFGIETKRDIDGGKIRRWYLQPDDATVFYDPRRAPLAAFLH 360 (1191)
Q Consensus 284 ~~~~---~~~k~s~l~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 360 (1191)
+... ...+.+|+++.++++...++.+.++++++.++...+ .+.. . +...
T Consensus 247 ia~~~~~~~~~~t~l~~~l~~~~~~l~~~~l~~~~~~~~~~~~-~~~~-------~--------------------~~~~ 298 (917)
T COG0474 247 IARLLPTKKEVKTPLQRKLNKLGKFLLVLALVLGALVFVVGLF-RGGN-------G--------------------LLES 298 (917)
T ss_pred HHHhhccccccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hcCc-------c--------------------HHHH
Confidence 7543 335689999999999999999999888888766522 2111 1 2448
Q ss_pred HHHHHHHhhccccchhhhHHHHHHHHHHHHHhhcccccccCCCCCccccCccccccccceeEEEecCCCccccceeEEEE
Q 001008 361 FLTGLMLYGYLIPISLYISIEIVKVLQSVFINHDRDMYYEDTDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFVK 440 (1191)
Q Consensus 361 ~~~~i~ll~~~iP~sL~v~~~~~~~~~~~~i~~d~~m~~~~~~~~~~v~~~~~~e~Lg~v~~i~~DKTGTLT~n~m~~~~ 440 (1191)
+++++++++++||++||+++++++.+++.+| +++++++|+++++|+||++++||||||||||+|+|+|++
T Consensus 299 ~~~~v~l~va~IPegLp~~vti~la~g~~~m----------ak~~~ivr~l~avE~LG~v~vICsDKTGTLTqN~M~v~~ 368 (917)
T COG0474 299 FLTALALAVAAVPEGLPAVVTIALALGAQRM----------AKDNAIVRSLNAIETLGSVDVICSDKTGTLTQNKMTVKK 368 (917)
T ss_pred HHHHHHHHHhccccchHHHHHHHHHHHHHHH----------HhccchhhccchhhhccCccEEEecCCCCCccCeEEEEE
Confidence 9999999999999999999999999999988 888999999999999999999999999999999999999
Q ss_pred EEEcCeeeccchhHHHHHHHHhhCCcccccCCCCCCCCCCCCccccCCCccCCcccCChhhhcccCCCCCChHHHHHHHH
Q 001008 441 CSVAGVAYGRVMTEVERTLAKRKGERTFEVDDSQTDAPGLNGNIVESGKSVKGFNFRDERIMNGQWVNEPHSDVIQKFFR 520 (1191)
Q Consensus 441 ~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 520 (1191)
|++++. +.+.. + ..........+++.
T Consensus 369 ~~~~~~--~~~~~--------------------------------------------~--------~~~~~~~~~~~~l~ 394 (917)
T COG0474 369 IYINGG--GKDID--------------------------------------------D--------KDLKDSPALLRFLL 394 (917)
T ss_pred EEeCCC--ccccc--------------------------------------------c--------cccccchHHHHHHH
Confidence 998851 00000 0 00012234457899
Q ss_pred HHhhhccceeccCCCCCceEEecCCccHHHHHHHHHHcCcEEEeecCCeeEEEecCCCCccccceEEEEeEeecccCCCc
Q 001008 521 VLAICHTAIPDVNEETGEISYEAESPDEAAFVIAAREVGFQFFGSSQTSISLHELDPVSGQKVNRVYELLHVLEFTSSRK 600 (1191)
Q Consensus 521 ~lalC~~~~~~~~~~~~~~~y~~~sp~e~Alv~~a~~~g~~~~~~~~~~~~i~~~~~~~~~~~~~~~~il~~~~F~s~rk 600 (1191)
++++||++.+..+ + .+..+||+|.||++++++.|+.+ .+ . .....+++++.+||||+||
T Consensus 395 ~~~lc~~~~~~~~-~----~~~~gdptE~Al~~~a~~~~~~~-~~--~-------------~~~~~~~~~~~~PFdS~rK 453 (917)
T COG0474 395 AAALCNSVTPEKN-G----WYQAGDPTEGALVEFAEKLGFSL-DL--S-------------GLEVEYPILAEIPFDSERK 453 (917)
T ss_pred HHHhcCccccccc-C----ceecCCccHHHHHHHHHhcCCcC-CH--H-------------HHhhhcceeEEecCCCCce
Confidence 9999999988654 3 56789999999999999999744 10 0 1255678999999999999
Q ss_pred eEEEEEEcCCCcEEEEEeccchHHHHHHhh------cChhhHHHHHHHHHHHHhccceEEEEEEEecCHHHHHHHHHHHH
Q 001008 601 RMSVMVRNPENQLLLLCKGADSVMFERLSK------HGQQFEAETRRHINRYAEAGLRTLVIAYRELGEDEYRIWEKEFL 674 (1191)
Q Consensus 601 rmsviv~~~~~~~~l~~KGa~~~i~~~~~~------~~~~~~~~~~~~l~~~a~~GlR~L~~A~r~l~~~~~~~~~~~~~ 674 (1191)
||||+++..+++++++|||||++|+++|+. ..++.++.+.+..++|+++|||+|++|||.++.++..
T Consensus 454 rMsviv~~~~~~~~~~~KGApe~il~~~~~~~~~~~~~~~~~~~~~~~~~~la~~glRvla~A~k~~~~~~~~------- 526 (917)
T COG0474 454 RMSVIVKTDEGKYILFVKGAPEVILERCKSIGELEPLTEEGLRTLEEAVKELASEGLRVLAVAYKKLDRAEKD------- 526 (917)
T ss_pred EEEEEEEcCCCcEEEEEcCChHHHHHHhcccCcccccCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCccccc-------
Confidence 999999977788999999999999999985 2446678899999999999999999999977654311
Q ss_pred HHhhcchhhHHHHHHHHHHHhhccceEEEeeeecccccCCcHHHHHHHHHcCCeEEEEeCCCHhhHHHHHHHcCccccCc
Q 001008 675 KAKTSVTSDREALVASAAEKIERDLILLGATAVEDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEM 754 (1191)
Q Consensus 675 ~a~~~l~~~r~~~~~~~~~~iE~dl~llG~~~ieD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~ 754 (1191)
. .. +.+|+||+|+|++||+||+|++|+++|+.|++|||++||+|||+.+||++||++||+..+..
T Consensus 527 ---------~-----~~-~~~E~dl~~lGl~g~~Dppr~~v~~aI~~l~~AGI~v~MiTGD~~~TA~aIa~~~Gi~~~~~ 591 (917)
T COG0474 527 ---------D-----EV-DEIESDLVFLGLTGIEDPPREDVKEAIEELREAGIKVWMITGDHVETAIAIAKECGIEAEAE 591 (917)
T ss_pred ---------c-----hh-hhhhccceeehhhhccCCCCccHHHHHHHHHHCCCcEEEECCCCHHHHHHHHHHcCCCCCCC
Confidence 0 11 67899999999999999999999999999999999999999999999999999999854321
Q ss_pred eEEEEecCCchhhhhhhhcchHHHHHHHHHHHHHHHHhhcccccccccccceeEEEEeCchhhHHhHHHHHHHHHHHHhh
Q 001008 755 KQIVITLDSPDMEALEKQGDKENITKVSLESVTKQIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAID 834 (1191)
Q Consensus 755 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~l~~~ 834 (1191)
. .++++|.+++.+.++++.+.+. .
T Consensus 592 --------------------------------------------------~--~~vi~G~el~~l~~~el~~~~~----~ 615 (917)
T COG0474 592 --------------------------------------------------S--ALVIDGAELDALSDEELAELVE----E 615 (917)
T ss_pred --------------------------------------------------c--eeEeehHHhhhcCHHHHHHHhh----h
Confidence 0 5699999999888775555544 4
Q ss_pred cCceEEEcCChhhHHHHHHHhhcCCCEEEEEcCCccChHhhhhcceeEEecc--Cccchhhhccceeccchhh--hhHhh
Q 001008 835 CASVICCRSSPKQKALVTRLVKGTGKTTLAIGDGANDVGMLQEADIGVGISG--VEGMQAVMSSDYAIAQFRF--LERLL 910 (1191)
Q Consensus 835 ~~~~v~~r~sP~qK~~iV~~l~~~g~~vl~iGDG~ND~~ml~~AdvGI~i~g--~e~~~a~~~aD~vl~~f~~--l~~ll 910 (1191)
++ ||||+||+||.++|+.+|+.|++|+|+|||+||+||||+|||||||.+ ++. |+++||+++.++++ +..+
T Consensus 616 ~~--VfARvsP~qK~~IV~~lq~~g~vVamtGDGvNDapALk~ADVGIamg~~Gtda--ak~Aadivl~dd~~~~i~~a- 690 (917)
T COG0474 616 LS--VFARVSPEQKARIVEALQKSGHVVAMTGDGVNDAPALKAADVGIAMGGEGTDA--AKEAADIVLLDDNFATIVLA- 690 (917)
T ss_pred Cc--EEEEcCHHHHHHHHHHHHhCCCEEEEeCCCchhHHHHHhcCccEEecccHHHH--HHhhcceEeecCcHHHHHHH-
Confidence 44 999999999999999999999999999999999999999999999954 454 78999999998554 6666
Q ss_pred hhhchhhhhHhhHhHHHHHHhHHHHHHHHHHHHhhhccccccchhHHHHHHHHHHhhhhhHHhhhcccccCChhhhhcCc
Q 001008 911 LVHGHWCYRRISMMICYFFYKNLTFGFTLFWYEAYASFSGRPAYNDWYMSCYNVFFTSLPVIALGVFDQDVSARLCLKYP 990 (1191)
Q Consensus 911 l~~GR~~~~~i~~~i~~~~~~n~~~~~~~~~~~~~~~~s~~~~~~~~~~l~~n~~~~~~p~~~l~~~~~d~~~~~~~~~P 990 (1191)
++|||++|.|+++++.|.+++|+..+++++++.+++.+ ..+|.++|++|+|++++++|++++++++ ++...|++|
T Consensus 691 v~eGR~~~~ni~k~i~~~l~~n~~~~~~~~~~~~~~~~--~~p~~~~qll~inll~d~~pa~~L~~~~---~~~~~m~~~ 765 (917)
T COG0474 691 VVEGRRVYVNIKKFILYLLSKNVGEVLTLLIYSLFNLF--FLPLTPLQLLWINLLTDSLPALALGVED---PESDVMKRP 765 (917)
T ss_pred HHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc--cccHHHHHHHHHHHHHhhhhhheeecCC---CcccccccC
Confidence 99999999999999999999999999999999988765 4679999999999999999999999976 344555555
Q ss_pred cchhccccCCccchhhHHHhhHhHHHHHHHHHHHHHhhhccccc-cCCCcceehhhhhhHHhhHHHHHHHHHHHhhhcc-
Q 001008 991 LLYQEGVQNILFSWPRILGWMSNGVLSAIIIFFFTTNSIFNQAF-RKDGHAVDYEVLGVAMYSSVVWAVNCQMALSINY- 1068 (1191)
Q Consensus 991 ~ly~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~f~~~v~~~~~~~~l~~~~- 1068 (1191)
+ .+++..+|+.+.++.|++...+++.+++++.+..+..... ...+.........++.|+.+++.+.+..+.....
T Consensus 766 ~---~~p~~~i~~~~~~~~~i~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~~~~~~~~~~~~~~~~~ 842 (917)
T COG0474 766 P---RGPEEGLFNRKIFWRFILIIGLLSAILFILTFLLYLLGFIANTLGLDLFQALLQTTAFTVLVLIQLLLTLAVRSRG 842 (917)
T ss_pred C---CCccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 2 3788899999999999999888888888777765543111 1112111244567888888887776666543222
Q ss_pred ---ch--hhHHHHHHHHHHHHHHHHHHHhcCCCCCcchhHHHHHHHHhcCHhHHHHHHHHHH
Q 001008 1069 ---FT--WIQHFFIWGSIALWYIFLVVYGSLPPTFSTTAYKVLVEACAPSILYWLTTLLVVV 1125 (1191)
Q Consensus 1069 ---~~--~~~~~~i~~si~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~s~~~wl~~l~~~~ 1125 (1191)
|+ ++.+..+|+++++..+++++..+.|.... ..|...+.+...|+.++.+..
T Consensus 843 ~~~~~~~~~~n~~~~~~~~~~~~l~l~~~~~~~~~~-----~~f~~~~~~~~~~~~~~~~~~ 899 (917)
T COG0474 843 RPFLSSLLFSNKYLWLALLVIIILQLLIIFLPPLNL-----KIFQPTPLSLFEWLIAIAVAL 899 (917)
T ss_pred cchhhcccccCHHHHHHHHHHHHHHHHHHHhHHhHh-----hhccCCCCcHHHHHHHHHHHH
Confidence 22 23677888888888888888887774311 144455666666777665553
No 7
>TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type. The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump.
Probab=100.00 E-value=3.4e-110 Score=1066.33 Aligned_cols=910 Identities=16% Similarity=0.196 Sum_probs=668.7
Q ss_pred CccccccCCCCceeecCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHhcccCCcCCCchhhHHHHHHHHHHHHHHHHHHH
Q 001008 47 NPEVVQLNYRGNYVSTTKYTAANFIPKSLFEQFRRVANIYFLVVAFVSFSPLAPYSAPSVLAPLIVVIGATMAKEGVEDW 126 (1191)
Q Consensus 47 ~~~~~~~~~g~N~i~~~k~~~~~flp~~l~~qf~~~~n~~fl~~~il~~~~~~~~~~~~~~~~l~~vl~~~~i~~~~~d~ 126 (1191)
+.++|+++||.|+++.++.+.+. +.+++||..+++++++++++++++. +.|...+.++++++++++..+++++
T Consensus 31 ea~~rl~~~G~N~l~~~~~~s~~---~~~l~q~~~~~~~iL~~aails~~~----~~~~~~~iIl~vv~in~~i~~~QE~ 103 (1053)
T TIGR01523 31 EAQHRLKEVGENRLEADSGIDAK---AMLLHQVCNAMCMVLIIAAAISFAM----HDWIEGGVISAIIALNILIGFIQEY 103 (1053)
T ss_pred HHHHHHHHcCCCCCCCCCCCCHH---HHHHHHHhCHHHHHHHHHHHHHHHH----hhHHHHHHHHhHHHHHHHHHHHHHH
Confidence 34678999999999998765443 8899999999999999999999984 4566677788889999999999999
Q ss_pred HHhhhHHHHh---cceEEEEecCCeEEEEeccccccccEEEEeCCCcccceEEEEeeeCCCceEEEEeccCCcccccEee
Q 001008 127 RRRKQDIEAN---NRKVKVYGQDHTFVETKWKNLRVGDLVKVHKDEYFPADLLLLSSIYEDGICYVETMNLDGETNLKLK 203 (1191)
Q Consensus 127 ~r~k~~~~~n---~~~~~V~r~~g~~~~i~~~~L~vGDIV~l~~ge~iPaD~~lL~ss~~~g~~~Vd~s~LtGEs~~~~K 203 (1191)
+..++..++. +.+++|+| ||++++|+++||+|||||.|++||.||||++|+++++ +.||||+|||||.|+.|
T Consensus 104 ~aekal~aL~~l~~~~~~ViR-dg~~~~I~a~eLVpGDIv~L~~Gd~VPAD~rLi~~~~----L~VDES~LTGES~pV~K 178 (1053)
T TIGR01523 104 KAEKTMDSLKNLASPMAHVIR-NGKSDAIDSHDLVPGDICLLKTGDTIPADLRLIETKN----FDTDEALLTGESLPVIK 178 (1053)
T ss_pred HHHHHHHHHhccCCCceEEEe-CCeeeecCHhhCCCCCEEEECCCCEeeccEEEEEeCc----eEEEchhhcCCCCceec
Confidence 9999865554 67899999 9999999999999999999999999999999999766 99999999999999999
Q ss_pred cchhhhcccCChhhhcccceEEEeecCCCCceeeEEEEEEcCeeeccCCCceeecCcEeecCCeEEEEEEEecchhhHhh
Q 001008 204 RSLEATNHLRDEESFQKFTAVIKCEDPNERLYSFVGTLQYEGKQYPLSPQQILLRDSKLKNTDYVYGVVVFTGHDTKVMQ 283 (1191)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~i~~e~pn~~~~~f~Gt~~~~g~~~~l~~~n~l~rgs~l~nt~~~~gvVv~tG~~Tki~~ 283 (1191)
.+...... . . +....+...+.|+||.+.+|+ +.|+|++||.+|.+++
T Consensus 179 ~~~~~~~~-~--~---------~~~~~d~~n~lf~GT~V~~G~---------------------g~~vVvatG~~T~~Gk 225 (1053)
T TIGR01523 179 DAHATFGK-E--E---------DTPIGDRINLAFSSSAVTKGR---------------------AKGICIATALNSEIGA 225 (1053)
T ss_pred cccccccc-c--c---------cCCcccCCCccccCceEEeee---------------------EEEEEEEecCccHHHH
Confidence 86421100 0 0 000111222557777777777 9999999999996533
Q ss_pred c---cCCC-----C------------------------------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhc
Q 001008 284 N---ATDP-----P------------------------------SKRSKIERKMDKIVYLLFSTLILISSTGSVFFGIET 325 (1191)
Q Consensus 284 ~---~~~~-----~------------------------------~k~s~l~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~ 325 (1191)
. .... + ..+||+++++++++..++.+.++++++.+++..+
T Consensus 226 Ia~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tpLq~~l~~l~~~l~~i~~~~~~~~~~~~~~-- 303 (1053)
T TIGR01523 226 IAAGLQGDGGLFQRPEKDDPNKRRKLNKWILKVTKKVTGAFLGLNVGTPLHRKLSKLAVILFCIAIIFAIIVMAAHKF-- 303 (1053)
T ss_pred HHHHHhhhhhccccccccccccchhhhcccccccccchhhccccCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhh--
Confidence 3 2111 0 0149999999999999888877777766543211
Q ss_pred ccccCCCccccccccCCCCCcccCCCCchhHHHHHHHHHHHHhhccccchhhhHHHHHHHHHHHHHhhcccccccCCCCC
Q 001008 326 KRDIDGGKIRRWYLQPDDATVFYDPRRAPLAAFLHFLTGLMLYGYLIPISLYISIEIVKVLQSVFINHDRDMYYEDTDKP 405 (1191)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ll~~~iP~sL~v~~~~~~~~~~~~i~~d~~m~~~~~~~~ 405 (1191)
. + ....+..++.+++.++|++||++++++..+++.+| ++++
T Consensus 304 --~--------~-------------------~~~~~~~av~l~Va~VPegLp~~vti~La~g~~rM----------ak~~ 344 (1053)
T TIGR01523 304 --D--------V-------------------DKEVAIYAICLAISIIPESLIAVLSITMAMGAANM----------SKRN 344 (1053)
T ss_pred --h--------h-------------------hHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHH----------HhcC
Confidence 0 0 01255678899999999999999999999999988 8899
Q ss_pred ccccCccccccccceeEEEecCCCccccceeEEEEEEEcCe-eeccchhHHHHHHHHhhCCcccccCCCCCCCCCCCCcc
Q 001008 406 ARARTSNLNEELGQVDTILSDKTGTLTCNSMEFVKCSVAGV-AYGRVMTEVERTLAKRKGERTFEVDDSQTDAPGLNGNI 484 (1191)
Q Consensus 406 ~~v~~~~~~e~Lg~v~~i~~DKTGTLT~n~m~~~~~~i~~~-~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~ 484 (1191)
++||+++++|+||++++||+|||||||+|+|+|+++++++. .|...... ....+........+......
T Consensus 345 ~lVr~L~avEtLG~vtvICsDKTGTLT~N~M~V~~i~~~~~~~~~~~~~~----------~~~~~~~g~~~~~~~~~~~~ 414 (1053)
T TIGR01523 345 VIVRKLDALEALGAVNDICSDKTGTITQGKMIARQIWIPRFGTISIDNSD----------DAFNPNEGNVSGIPRFSPYE 414 (1053)
T ss_pred CEeccchhhhhccCccEEEecCcCccccceEEEEEEEEcCCceEEecCCC----------CCCCCccccccccccccccc
Confidence 99999999999999999999999999999999999998752 22110000 00000000000000000000
Q ss_pred ccCCCccCCcccCChhhhcc-----cCCC---CCChHHHHHHHHHHhhhccceeccCCCCCceEEecCCccHHHHHHHHH
Q 001008 485 VESGKSVKGFNFRDERIMNG-----QWVN---EPHSDVIQKFFRVLAICHTAIPDVNEETGEISYEAESPDEAAFVIAAR 556 (1191)
Q Consensus 485 ~~~~~~~~~~~~~~~~l~~~-----~~~~---~~~~~~~~~~~~~lalC~~~~~~~~~~~~~~~y~~~sp~e~Alv~~a~ 556 (1191)
.......++.+... .... ....+...+++.+.++||++....++..+.+. ..+||+|.||+.+|.
T Consensus 415 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~lcn~a~~~~~~~~~~~~-~~GdptE~ALl~~a~ 487 (1053)
T TIGR01523 415 ------YSHNEAADQDILKEFKDELKEIDLPEDIDMDLFIKLLETAALANIATVFKDDATDCWK-AHGDPTEIAIHVFAK 487 (1053)
T ss_pred ------ccccccccccccccccccccccccccccccHHHHHHHHHHHhccCCeeeccCCCCcee-eCcCccHHHHHHHHH
Confidence 00000000000000 0000 00123467799999999998765432222222 247999999999999
Q ss_pred HcCcEEEee---------cC-CeeEEEecCCCCccccceEEEEeEeecccCCCceEEEEEEcCCC-cEEEEEeccchHHH
Q 001008 557 EVGFQFFGS---------SQ-TSISLHELDPVSGQKVNRVYELLHVLEFTSSRKRMSVMVRNPEN-QLLLLCKGADSVMF 625 (1191)
Q Consensus 557 ~~g~~~~~~---------~~-~~~~i~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~-~~~l~~KGa~~~i~ 625 (1191)
+.|+..... .+ ....++.... .+....|++++.+||||+|||||++++++++ ++++|+|||||.|+
T Consensus 488 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~pFds~rK~msvv~~~~~~~~~~~~~KGApe~il 564 (1053)
T TIGR01523 488 KFDLPHNALTGEEDLLKSNENDQSSLSQHNE---KPGSAQFEFIAEFPFDSEIKRMASIYEDNHGETYNIYAKGAFERII 564 (1053)
T ss_pred HcCCCcccccchhhhhhhccccccccccccc---cccccccceEEEeccCCCCCeEEEEEEeCCCCEEEEEEeCChHHHH
Confidence 999742100 00 0000110000 0013568899999999999999999997644 58999999999999
Q ss_pred HHHhhc-----------ChhhHHHHHHHHHHHHhccceEEEEEEEecCHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHH
Q 001008 626 ERLSKH-----------GQQFEAETRRHINRYAEAGLRTLVIAYRELGEDEYRIWEKEFLKAKTSVTSDREALVASAAEK 694 (1191)
Q Consensus 626 ~~~~~~-----------~~~~~~~~~~~l~~~a~~GlR~L~~A~r~l~~~~~~~~~~~~~~a~~~l~~~r~~~~~~~~~~ 694 (1191)
++|+.. +++.++.+.+.+++|+.+|+|||++|||+++++++..+ .+.. .. . ..+.
T Consensus 565 ~~c~~~~~~~~~~~~~l~~~~~~~i~~~~~~~a~~GlRvLa~A~r~l~~~~~~~~--~~~~---~~-~--------~~~~ 630 (1053)
T TIGR01523 565 ECCSSSNGKDGVKISPLEDCDRELIIANMESLAAEGLRVLAFASKSFDKADNNDD--QLKN---ET-L--------NRAT 630 (1053)
T ss_pred HhhhHhhcCCCCccccCCHHHHHHHHHHHHHHHhcCCeEEEEEEEECCchhccch--hhhc---cc-c--------chhh
Confidence 999742 22346778889999999999999999999987554221 0000 00 0 1245
Q ss_pred hhccceEEEeeeecccccCCcHHHHHHHHHcCCeEEEEeCCCHhhHHHHHHHcCccccCceEEEEecCCchhhhhhhhcc
Q 001008 695 IERDLILLGATAVEDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGD 774 (1191)
Q Consensus 695 iE~dl~llG~~~ieD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~ 774 (1191)
+|+||+|+|+++++||+|++++++|+.|+++||+|||+|||+..||.+||++|||++++... ...
T Consensus 631 ~e~~L~~~G~~~~~Dp~r~~v~~aI~~l~~aGIkv~MiTGD~~~tA~~iA~~~Gi~~~~~~~---~~~------------ 695 (1053)
T TIGR01523 631 AESDLEFLGLIGIYDPPRNESAGAVEKCHQAGINVHMLTGDFPETAKAIAQEVGIIPPNFIH---DRD------------ 695 (1053)
T ss_pred hccCCEEEEEEeeecCCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCccccc---ccc------------
Confidence 78999999999999999999999999999999999999999999999999999998643110 000
Q ss_pred hHHHHHHHHHHHHHHHHhhcccccccccccceeEEEEeCchhhHHhHHHHHHHHHHHHhhcCceEEEcCChhhHHHHHHH
Q 001008 775 KENITKVSLESVTKQIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRL 854 (1191)
Q Consensus 775 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~l~~~~~~~v~~r~sP~qK~~iV~~ 854 (1191)
......+++|++++.+.++++.+... ...||||++|+||.++|+.
T Consensus 696 -----------------------------~~~~~~vitG~~l~~l~~~~l~~~~~------~~~V~ar~sP~~K~~iV~~ 740 (1053)
T TIGR01523 696 -----------------------------EIMDSMVMTGSQFDALSDEEVDDLKA------LCLVIARCAPQTKVKMIEA 740 (1053)
T ss_pred -----------------------------ccccceeeehHHhhhcCHHHHHHHhh------cCeEEEecCHHHHHHHHHH
Confidence 00113689999998776655544332 3469999999999999999
Q ss_pred hhcCCCEEEEEcCCccChHhhhhcceeEEe--ccCccchhhhccceeccc--hhhhhHhhhhhchhhhhHhhHhHHHHHH
Q 001008 855 VKGTGKTTLAIGDGANDVGMLQEADIGVGI--SGVEGMQAVMSSDYAIAQ--FRFLERLLLVHGHWCYRRISMMICYFFY 930 (1191)
Q Consensus 855 l~~~g~~vl~iGDG~ND~~ml~~AdvGI~i--~g~e~~~a~~~aD~vl~~--f~~l~~lll~~GR~~~~~i~~~i~~~~~ 930 (1191)
+|+.|++|+|+|||+||+|||++|||||+| +|++. |+++||+++.+ |+.+.++ +.|||++|+|+++++.|.++
T Consensus 741 lq~~g~~Vam~GDGvNDapaLk~AdVGIAmg~~gt~v--ak~aADivl~dd~f~~I~~~-i~~gR~~~~ni~k~i~y~l~ 817 (1053)
T TIGR01523 741 LHRRKAFCAMTGDGVNDSPSLKMANVGIAMGINGSDV--AKDASDIVLSDDNFASILNA-IEEGRRMFDNIMKFVLHLLA 817 (1053)
T ss_pred HHhcCCeeEEeCCCcchHHHHHhCCccEecCCCccHH--HHHhcCEEEecCCHHHHHHH-HHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999988 36666 89999999997 7779999 89999999999999999999
Q ss_pred hHHHHHHHHHHHHhhhcccccc--chhHHHHHHHHHHhhhhhHHhhhcccccCChhhhhcCccchhccccCCccchhhHH
Q 001008 931 KNLTFGFTLFWYEAYASFSGRP--AYNDWYMSCYNVFFTSLPVIALGVFDQDVSARLCLKYPLLYQEGVQNILFSWPRIL 1008 (1191)
Q Consensus 931 ~n~~~~~~~~~~~~~~~~s~~~--~~~~~~~l~~n~~~~~~p~~~l~~~~~d~~~~~~~~~P~ly~~~~~~~~~~~~~~~ 1008 (1191)
+|+..+++.+++.++..++|.+ +++++|++|+|++++.+|++++++++ ++++.|.++|+ .+...++++..+.
T Consensus 818 ~ni~~i~~~~~~~~~~~~~g~~~~Pl~~~qiL~inli~d~~palaL~~e~--~~~~~m~~~Pr----~~~~~l~~~~~~~ 891 (1053)
T TIGR01523 818 ENVAEAILLIIGLAFRDENGKSVFPLSPVEILWCIMITSCFPAMGLGLEK--AAPDLMDRLPH----DNEVGIFQKELII 891 (1053)
T ss_pred HhHHHHHHHHHHHHHhcccCCCcCchHHHHHHHHHHHHHHHHHHhhccCC--CChhHHhcCCC----CCCccccCHHHHH
Confidence 9999999999999887776753 58899999999999999999999853 45555555665 5667899999888
Q ss_pred HhhHhHHHHHHHHHHHHHhhhcc---cccc-----CCCcc-eehhhhhhHHhhHHHHHHHHHHHhhhcc-----c-----
Q 001008 1009 GWMSNGVLSAIIIFFFTTNSIFN---QAFR-----KDGHA-VDYEVLGVAMYSSVVWAVNCQMALSINY-----F----- 1069 (1191)
Q Consensus 1009 ~~~~~~~~~~~v~~~~~~~~~~~---~~~~-----~~g~~-~~~~~~~~~~f~~~v~~~~~~~~l~~~~-----~----- 1069 (1191)
.+++.|++.+++.+..+++.++. +... ..+.. .+.....++.|+++++.+.+..+. .++ |
T Consensus 892 ~~~~~g~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~t~~f~~l~~~~~~~~~~-~r~~~~~~~~~~~~ 970 (1053)
T TIGR01523 892 DMFAYGFFLGGSCLASFTGILYGFGSGNLGHDCDAHYHAGCNDVFKARSAAFATMTFCALILAVE-VKDFDNSFFNLHGI 970 (1053)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhccCccccccccccccccccchhhhHHHHHHHHHHHHHHHHHH-HhcCchhhhhcCcc
Confidence 89999999888777665433211 0000 00000 123345677888777766555432 111 1
Q ss_pred ------------hhhHHHHHHHHHHHHHHHHHHHhcCCCCCcchhHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHHH
Q 001008 1070 ------------TWIQHFFIWGSIALWYIFLVVYGSLPPTFSTTAYKVLVEACAPSILYWLTTLLVVVSTLLPYFLYRAF 1137 (1191)
Q Consensus 1070 ------------~~~~~~~i~~si~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~s~~~wl~~l~~~~~~ll~~~i~k~~ 1137 (1191)
..+.|.++++++++.++++++..|+|.. +.. +|++.++++ .|+.++.++++.++.+++.|++
T Consensus 971 ~~~~~~~~~~~~~~~~N~~l~~~~~~~~~l~~~~~~~p~~-~~~----~f~~~~l~~-~w~~~~~~~~~~~~~~e~~K~~ 1044 (1053)
T TIGR01523 971 PDGDSNFKEFFHSIVENKFLAWAIAFAAVSAFPTIYIPVI-NDD----VFKHKPIGA-EWGLAAAATIAFFFGAEIWKCG 1044 (1053)
T ss_pred ccccccccccccCCccCHHHHHHHHHHHHHHHHHHhhhhh-hhh----hhccCCcch-HHHHHHHHHHHHHHHHHHHHHH
Confidence 1246788999999999999999999853 321 556777775 8998988888899999999999
Q ss_pred HHhcC
Q 001008 1138 QTRFR 1142 (1191)
Q Consensus 1138 ~~~~~ 1142 (1191)
+|++.
T Consensus 1045 ~r~~~ 1049 (1053)
T TIGR01523 1045 KRRLF 1049 (1053)
T ss_pred HHhcc
Confidence 87663
No 8
>KOG0204 consensus Calcium transporting ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.5e-111 Score=964.96 Aligned_cols=848 Identities=21% Similarity=0.266 Sum_probs=668.5
Q ss_pred CccccccCCCCceeecCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHhccc-C----CcCCCchh---hHHHHHHHHHHH
Q 001008 47 NPEVVQLNYRGNYVSTTKYTAANFIPKSLFEQFRRVANIYFLVVAFVSFSP-L----APYSAPSV---LAPLIVVIGATM 118 (1191)
Q Consensus 47 ~~~~~~~~~g~N~i~~~k~~~~~flp~~l~~qf~~~~n~~fl~~~il~~~~-~----~~~~~~~~---~~~l~~vl~~~~ 118 (1191)
+.++|++-||+|.++.++...|. .++||.|++..-+++++++++++.. + .+-+|+.. ++.+++|+++++
T Consensus 124 el~~Rr~~fG~N~~p~k~~K~Fl---~fvweA~qD~TLiIL~vaAvvSl~lgi~~~g~~~GW~eG~aI~~sV~~VV~VtA 200 (1034)
T KOG0204|consen 124 ELERRRKIFGSNTYPEKPPKGFL---RFVWEALQDVTLIILMVAAVVSLGLGIYTPGIEDGWIEGVAILLSVILVVLVTA 200 (1034)
T ss_pred HHHHHHHhcCCCCCCCCCCccHH---HHHHHHhccchHHHHHHHHHHHHhhhhccCCCCcccccchhheeeEEEEEEEee
Confidence 34678899999999999987654 8899999999999999999998874 1 12234433 333455666777
Q ss_pred HHHHHHHHHHhhhHHHHhcceEEEEecCCeEEEEeccccccccEEEEeCCCcccceEEEEeeeCCCceEEEEeccCCccc
Q 001008 119 AKEGVEDWRRRKQDIEANNRKVKVYGQDHTFVETKWKNLRVGDLVKVHKDEYFPADLLLLSSIYEDGICYVETMNLDGET 198 (1191)
Q Consensus 119 i~~~~~d~~r~k~~~~~n~~~~~V~r~~g~~~~i~~~~L~vGDIV~l~~ge~iPaD~~lL~ss~~~g~~~Vd~s~LtGEs 198 (1191)
+.++.++.|-++.+++..+.++.|+| ||+.++|+..||+||||+.|+-||++||||+++++++ +.||||++||||
T Consensus 201 ~nDy~qe~QF~~L~~~k~~~k~~ViR-~G~r~~isI~diVVGDIv~lk~GDqvPADGvli~gn~----L~iDESSlTGES 275 (1034)
T KOG0204|consen 201 VNDYRQELQFRKLQKEKRNIKFQVIR-GGRRQQISIYDLVVGDIVQLKIGDQVPADGVLIQGNS----LKIDESSLTGES 275 (1034)
T ss_pred cchhHHhhhhhhhhhhhhceEEEEEE-CCEEEEEEEeeeeeccEEEeecCCccccceEEEeccc----eeEecccccCCC
Confidence 77777777777767777789999999 9999999999999999999999999999999999876 999999999999
Q ss_pred ccEeecchhhhcccCChhhhcccceEEEeecCCCCceeeEEEEEEcCeeeccCCCceeecCcEeecCCeEEEEEEEecch
Q 001008 199 NLKLKRSLEATNHLRDEESFQKFTAVIKCEDPNERLYSFVGTLQYEGKQYPLSPQQILLRDSKLKNTDYVYGVVVFTGHD 278 (1191)
Q Consensus 199 ~~~~K~~~~~~~~~~~~~~~~~~~~~i~~e~pn~~~~~f~Gt~~~~g~~~~l~~~n~l~rgs~l~nt~~~~gvVv~tG~~ 278 (1191)
+++.|.+ ..+.+.++||.+++|. +.++|+.+|.+
T Consensus 276 d~v~k~~-------------------------~~dPfLlSGTkv~eGs---------------------gkMlVTaVGmn 309 (1034)
T KOG0204|consen 276 DHVQKSL-------------------------DKDPFLLSGTKVMEGS---------------------GKMLVTAVGMN 309 (1034)
T ss_pred cceeccC-------------------------CCCCeEeecceeecCc---------------------ceEEEEEeeec
Confidence 9999974 3455889999999999 99999999999
Q ss_pred hhH---hhccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhc--ccccCCCccccccccCCCCCcccCCCCc
Q 001008 279 TKV---MQNATDPPSKRSKIERKMDKIVYLLFSTLILISSTGSVFFGIET--KRDIDGGKIRRWYLQPDDATVFYDPRRA 353 (1191)
Q Consensus 279 Tki---~~~~~~~~~k~s~l~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 353 (1191)
|+. |.........+||+|-++++++..+..+.++++.+++++..... +....+++. .|- .....
T Consensus 310 t~wG~~m~~l~~~~~e~tpLQ~kL~~lA~~Igk~Gl~~A~~~~~VL~~r~~~~~~~~~~~~-~~~----------~~~~~ 378 (1034)
T KOG0204|consen 310 TQWGIIMTLLGAGGEEETPLQVKLNGLATQIGKIGLLFAALTFIVLVIRFFIGKTKIEGGT-GTT----------WSDEY 378 (1034)
T ss_pred chHhhHHHhhhcCCCcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhheeeecCCCC-Ccc----------ccHHH
Confidence 954 55556666688999999999999988887777777665544321 111111100 010 01112
Q ss_pred hhHHHHHHHHHHHHhhccccchhhhHHHHHHHHHHHHHhhcccccccCCCCCccccCccccccccceeEEEecCCCcccc
Q 001008 354 PLAAFLHFLTGLMLYGYLIPISLYISIEIVKVLQSVFINHDRDMYYEDTDKPARARTSNLNEELGQVDTILSDKTGTLTC 433 (1191)
Q Consensus 354 ~~~~~~~~~~~i~ll~~~iP~sL~v~~~~~~~~~~~~i~~d~~m~~~~~~~~~~v~~~~~~e~Lg~v~~i~~DKTGTLT~ 433 (1191)
...++..|..++.+++.++|++||+++++..++...+| .+.+.++|.++++|++|+.+.||+|||||||.
T Consensus 379 ~~~~v~~f~i~VTilVVAVPEGLPLAVTLsLAys~kkM----------mkD~~LVRhL~ACETMGsAT~ICsDKTGTLT~ 448 (1034)
T KOG0204|consen 379 IQEFVKFFIIAVTILVVAVPEGLPLAVTLSLAYSMKKM----------MKDNNLVRHLDACETMGSATAICSDKTGTLTT 448 (1034)
T ss_pred HHHHHHHhhheeEEEEEECCCCccHHHHHHHHHHHHHH----------hcchhHHHHhHHHhhcCCceEEEecCcCceEe
Confidence 34456677778888999999999999999999998877 45568899999999999999999999999999
Q ss_pred ceeEEEEEEEcCeeeccchhHHHHHHHHhhCCcccccCCCCCCCCCCCCccccCCCccCCcccCChhhhcccCCCCCChH
Q 001008 434 NSMEFVKCSVAGVAYGRVMTEVERTLAKRKGERTFEVDDSQTDAPGLNGNIVESGKSVKGFNFRDERIMNGQWVNEPHSD 513 (1191)
Q Consensus 434 n~m~~~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 513 (1191)
|+|++.+.++++..|..+... . ..-.+.
T Consensus 449 N~MtVV~~~~~~~~~k~~~~~-~---------------------------------------------------~~l~~~ 476 (1034)
T KOG0204|consen 449 NRMTVVQSYIGSEHYKVNSPK-S---------------------------------------------------SNLPPS 476 (1034)
T ss_pred eeEEEEeeeeccccccccCcc-c---------------------------------------------------ccCCHH
Confidence 999999999998876532110 0 000112
Q ss_pred HHHHHHHHHhhhccceeccCCCCCceEEecCCccHHHHHHHHHHcCcEEEeecCCeeEEEecCCCCccccceEEEEeEee
Q 001008 514 VIQKFFRVLAICHTAIPDVNEETGEISYEAESPDEAAFVIAAREVGFQFFGSSQTSISLHELDPVSGQKVNRVYELLHVL 593 (1191)
Q Consensus 514 ~~~~~~~~lalC~~~~~~~~~~~~~~~y~~~sp~e~Alv~~a~~~g~~~~~~~~~~~~i~~~~~~~~~~~~~~~~il~~~ 593 (1191)
....++.+++...+-..-.++..+....+.+||+|.||+.++..+|.++.. .+.+.++.+++
T Consensus 477 ~~~ll~~gI~~Nt~g~v~~~~~~g~~~~~~GspTE~AlL~f~~~LG~~~~~------------------~R~e~~v~kv~ 538 (1034)
T KOG0204|consen 477 LLDLLLQGIAQNTTGSVVKPEKGGEQPEQLGSPTECALLGFGLKLGMDFQD------------------VRPEEKVVKVY 538 (1034)
T ss_pred HHHHHHHHHhhcCCCeEEecCCCCcCccccCCHHHHHHHHHHHHhCcchHh------------------hcchhheeEEe
Confidence 233455556655444333333333333456899999999999999987754 25567789999
Q ss_pred cccCCCceEEEEEEcCCCcEEEEEeccchHHHHHHhhc----------ChhhHHHHHHHHHHHHhccceEEEEEEEecCH
Q 001008 594 EFTSSRKRMSVMVRNPENQLLLLCKGADSVMFERLSKH----------GQQFEAETRRHINRYAEAGLRTLVIAYRELGE 663 (1191)
Q Consensus 594 ~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~----------~~~~~~~~~~~l~~~a~~GlR~L~~A~r~l~~ 663 (1191)
||+|+||||+|+++.+++..++++|||.|.|+..|... +++.+..++..++.||.+||||+|+|||+...
T Consensus 539 ~FNS~kK~~gvvi~~~~~~~y~~~KGAsEiVL~~C~~~~~~~g~~~~~~e~~~~~~~~~Ie~mA~~~LRti~lAy~df~~ 618 (1034)
T KOG0204|consen 539 PFNSVKKRMGVVIKLPDGGHYVHWKGASEIVLKSCEYYIDSNGELVPFNEDDRKSFKDVIEPMASEGLRTICLAYRDFVA 618 (1034)
T ss_pred ccCcccceeeEEEEcCCCCeEEEEcChHHHHHHhhhheECCCCCEeeCCHHHHHHHHHHHHHHHHhhhheeeEEeecccc
Confidence 99999999999999888773399999999999999864 34456688899999999999999999999544
Q ss_pred H--HHHHHHHHHHHHhhcchhhHHHHHHHHHHHhhccceEEEeeeecccccCCcHHHHHHHHHcCCeEEEEeCCCHhhHH
Q 001008 664 D--EYRIWEKEFLKAKTSVTSDREALVASAAEKIERDLILLGATAVEDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAI 741 (1191)
Q Consensus 664 ~--~~~~~~~~~~~a~~~l~~~r~~~~~~~~~~iE~dl~llG~~~ieD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~ 741 (1191)
. +-.+|.. .+..+.+|+++|++||+||+||||+++|+.|++|||+|.|+||||..||.
T Consensus 619 ~~~~~~~~~~--------------------~~~~~~~lt~laivGIkDPvRPgV~~AV~~Cq~AGItVRMVTGDNI~TAk 678 (1034)
T KOG0204|consen 619 GPDEEPSWDN--------------------EELPEGGLTLLAIVGIKDPVRPGVPEAVQLCQRAGITVRMVTGDNINTAK 678 (1034)
T ss_pred CCCCCCCccc--------------------cccCCCCeEEEEEeeccCCCCCCcHHHHHHHHHcCcEEEEEeCCcHHHHH
Confidence 3 1111110 14557899999999999999999999999999999999999999999999
Q ss_pred HHHHHcCccccCceEEEEecCCchhhhhhhhcchHHHHHHHHHHHHHHHHhhcccccccccccceeEEEEeCchhhHHhH
Q 001008 742 NIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQIREGISQVNSAKESKVTFGLVIDGKSLDFALD 821 (1191)
Q Consensus 742 ~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~ 821 (1191)
+||.+|||+.++.. .++++|+++..+.+
T Consensus 679 AIA~eCGILt~~~d----------------------------------------------------~~~lEG~eFr~~s~ 706 (1034)
T KOG0204|consen 679 AIARECGILTPGGD----------------------------------------------------FLALEGKEFRELSQ 706 (1034)
T ss_pred HHHHHcccccCCCc----------------------------------------------------cceecchhhhhcCH
Confidence 99999999987632 24778888887777
Q ss_pred HHHHHHHHHHHhhcCceEEEcCChhhHHHHHHHhhcCCCEEEEEcCCccChHhhhhcceeEEe--ccCccchhhhcccee
Q 001008 822 KKLEKMFLDLAIDCASVICCRSSPKQKALVTRLVKGTGKTTLAIGDGANDVGMLQEADIGVGI--SGVEGMQAVMSSDYA 899 (1191)
Q Consensus 822 ~~~~~~~~~l~~~~~~~v~~r~sP~qK~~iV~~l~~~g~~vl~iGDG~ND~~ml~~AdvGI~i--~g~e~~~a~~~aD~v 899 (1191)
+++.+...++ .|.||.+|.+|..+|+.+++.|++|+++|||.||+|||++||||.+| +|+|. |+++||++
T Consensus 707 ee~~~i~pkl------~VlARSSP~DK~lLVk~L~~~g~VVAVTGDGTNDaPALkeADVGlAMGIaGTeV--AKEaSDII 778 (1034)
T KOG0204|consen 707 EERDKIWPKL------RVLARSSPNDKHLLVKGLIKQGEVVAVTGDGTNDAPALKEADVGLAMGIAGTEV--AKEASDII 778 (1034)
T ss_pred HHHHhhhhhh------eeeecCCCchHHHHHHHHHhcCcEEEEecCCCCCchhhhhcccchhccccchhh--hhhhCCeE
Confidence 7777777765 49999999999999999999999999999999999999999999954 88998 99999999
Q ss_pred ccchhh--hhHhhhhhchhhhhHhhHhHHHHHHhHHHHHHHHHHHHhhhccccccchhHHHHHHHHHHhhhhhHHhhhcc
Q 001008 900 IAQFRF--LERLLLVHGHWCYRRISMMICYFFYKNLTFGFTLFWYEAYASFSGRPAYNDWYMSCYNVFFTSLPVIALGVF 977 (1191)
Q Consensus 900 l~~f~~--l~~lll~~GR~~~~~i~~~i~~~~~~n~~~~~~~~~~~~~~~~s~~~~~~~~~~l~~n~~~~~~p~~~l~~~ 977 (1191)
|+|++| +++. +.|||..|.+++++++|.++-|++...+.|..+... +.+|+...|+||.|+++|.+.++++|.+
T Consensus 779 i~DDNFssIVk~-v~WGR~VY~nIqKFiQFQLTVNVvAliv~fv~A~~~---~dsPLtAVQlLWVNLIMDTLgALALATe 854 (1034)
T KOG0204|consen 779 ILDDNFSSIVKA-VKWGRNVYDNIQKFLQFQLTVNVVALIVNFVSACAT---GDSPLTAVQLLWVNLIMDTLGALALATE 854 (1034)
T ss_pred EEcCchHHHHHH-HHhhhHHHHHHHHhheeEEEEEEEeehhhhhhhhhc---CCccHHHHHHHHHHHHHHHHHHHHhccC
Confidence 999555 9999 899999999999999999999999999999887765 5678999999999999999999999986
Q ss_pred cccCChhhhhcCccchhccccCCccchhhHHHhhHhHHHHHHHHHHHHHhhhccccccCCCcce-ehhhhhhHHhhHHHH
Q 001008 978 DQDVSARLCLKYPLLYQEGVQNILFSWPRILGWMSNGVLSAIIIFFFTTNSIFNQAFRKDGHAV-DYEVLGVAMYSSVVW 1056 (1191)
Q Consensus 978 ~~d~~~~~~~~~P~ly~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~f~~~v~ 1056 (1191)
+ |+++.+.+.|. +++.+++++.+|..++.+++||-+++|.+.+.... .+..++... .-....|++|.++|+
T Consensus 855 p--Pt~~Lm~RkP~----GR~~~LIt~tMwknil~qa~YQl~vl~iL~F~G~~--if~~~~~~~~~~~~~nTiIFNtFV~ 926 (1034)
T KOG0204|consen 855 P--PTDELMKRKPV----GRTKPLITRTMWKNILGQAVYQLIVLFILNFAGKS--IFGLNGPLHSPPSVHNTIIFNTFVF 926 (1034)
T ss_pred C--CChHHhcCCCC----CCCCcchHHHHHHHHHHHHHHHHHHHHHHHhcchh--hhccCCCCCCchhhheeeehhHHHH
Confidence 4 66676667776 99999999999999999999999999998876432 333333321 122455788888887
Q ss_pred HHHHHHHhhhccc---h----hhHHHHHHHHHHHHHHHHHHHhcCCCCCcchhHHHHHHHHhcCHhHHHHHHHHHHHHHH
Q 001008 1057 AVNCQMALSINYF---T----WIQHFFIWGSIALWYIFLVVYGSLPPTFSTTAYKVLVEACAPSILYWLTTLLVVVSTLL 1129 (1191)
Q Consensus 1057 ~~~~~~~l~~~~~---~----~~~~~~i~~si~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~s~~~wl~~l~~~~~~ll 1129 (1191)
.+-+.-+. .|.. + .+.+..+.+.+...++++.++..+... +|++.++++..|+.++++.++.++
T Consensus 927 ~qvFNEin-aRki~~~NvFkgi~~N~~F~~ii~~T~v~QviIveF~g~--------~~st~~L~~~qWl~ci~~g~~sl~ 997 (1034)
T KOG0204|consen 927 CQVFNEIN-ARKIDERNVFKGIFRNRLFCVIITITVVSQVIIVEFGGA--------FFSTTPLSLTQWLWCIFIGVLSLP 997 (1034)
T ss_pred HHHHHHHh-hcchhHHhHHHHHhcCceEEEEeeeeeehhhhhhhhcCc--------ceeeecccHHHHHHHHHHHHHHHH
Confidence 65444322 2211 1 223444444455566666666555432 455788999999999999999998
Q ss_pred HHHHHHHHHHh
Q 001008 1130 PYFLYRAFQTR 1140 (1191)
Q Consensus 1130 ~~~i~k~~~~~ 1140 (1191)
.-.+.|.+-..
T Consensus 998 ~g~~ik~iP~~ 1008 (1034)
T KOG0204|consen 998 WGQLLKCIPVS 1008 (1034)
T ss_pred HHHHheecccc
Confidence 88888765443
No 9
>TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit. Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps.
Probab=100.00 E-value=8.8e-108 Score=1049.33 Aligned_cols=877 Identities=18% Similarity=0.202 Sum_probs=668.8
Q ss_pred CccccccCCCCceeecCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHhcccCC---------cCCCchhhHHHHHHHHHH
Q 001008 47 NPEVVQLNYRGNYVSTTKYTAANFIPKSLFEQFRRVANIYFLVVAFVSFSPLA---------PYSAPSVLAPLIVVIGAT 117 (1191)
Q Consensus 47 ~~~~~~~~~g~N~i~~~k~~~~~flp~~l~~qf~~~~n~~fl~~~il~~~~~~---------~~~~~~~~~~l~~vl~~~ 117 (1191)
+.++|+++||+|+++.++.+.+. +.|++||.++++++++++++++++... ..+.+...++++++++++
T Consensus 41 e~~~rl~~~G~N~l~~~~~~~~~---~~~l~~~~~~~~~iL~~aa~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~vv~i~ 117 (997)
T TIGR01106 41 RAAEILARDGPNALTPPPTTPEW---VKFCRQLFGGFSMLLWIGAILCFLAYGIQASTEEEPQNDNLYLGVVLSAVVIIT 117 (997)
T ss_pred HHHHHHHHhCCCCCCCCCCCCHH---HHHHHHHhcchHHHHHHHHHHHHHHHHHhhccCCCcccccHHHHHHHHHHHHHH
Confidence 34678999999999887766443 889999999999999999998776311 112455667788999999
Q ss_pred HHHHHHHHHHHhhhHHHHh---cceEEEEecCCeEEEEeccccccccEEEEeCCCcccceEEEEeeeCCCceEEEEeccC
Q 001008 118 MAKEGVEDWRRRKQDIEAN---NRKVKVYGQDHTFVETKWKNLRVGDLVKVHKDEYFPADLLLLSSIYEDGICYVETMNL 194 (1191)
Q Consensus 118 ~i~~~~~d~~r~k~~~~~n---~~~~~V~r~~g~~~~i~~~~L~vGDIV~l~~ge~iPaD~~lL~ss~~~g~~~Vd~s~L 194 (1191)
++.+++++++++++++.++ +.+++|+| ||++++|++++|+|||+|.|++||.|||||+++++++ +.||||+|
T Consensus 118 ~~i~~~qe~ka~~~l~~l~~~~~~~~~ViR-dg~~~~I~~~~lv~GDiv~l~~Gd~IPaD~~il~~~~----l~VdeS~L 192 (997)
T TIGR01106 118 GCFSYYQEAKSSKIMESFKNMVPQQALVIR-DGEKMSINAEQVVVGDLVEVKGGDRIPADLRIISAQG----CKVDNSSL 192 (997)
T ss_pred HHHHHHHHHHHHHHHHHHhccCCCeeEEEE-CCEEEEeeHHHCCCCCEEEECCCCEEeeeEEEEEccC----cEEEcccc
Confidence 9999999999999988776 46899999 9999999999999999999999999999999999764 89999999
Q ss_pred CcccccEeecchhhhcccCChhhhcccceEEEeecCCCCceeeEEEEEEcCeeeccCCCceeecCcEeecCCeEEEEEEE
Q 001008 195 DGETNLKLKRSLEATNHLRDEESFQKFTAVIKCEDPNERLYSFVGTLQYEGKQYPLSPQQILLRDSKLKNTDYVYGVVVF 274 (1191)
Q Consensus 195 tGEs~~~~K~~~~~~~~~~~~~~~~~~~~~i~~e~pn~~~~~f~Gt~~~~g~~~~l~~~n~l~rgs~l~nt~~~~gvVv~ 274 (1191)
||||.|+.|.+++.. ..+++.+|++++||.+.. |++.|+|++
T Consensus 193 TGES~pv~K~~~~~~-------------------------------------~~~~~~~n~l~~Gt~v~~-G~~~~~V~~ 234 (997)
T TIGR01106 193 TGESEPQTRSPEFTH-------------------------------------ENPLETRNIAFFSTNCVE-GTARGIVVN 234 (997)
T ss_pred CCCCCceeccCCCcc-------------------------------------cCccccCCeEEeccEeee-eeEEEEEEE
Confidence 999999999875321 012233444444444443 349999999
Q ss_pred ecchhhHhhccC---CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcccccCCCccccccccCCCCCcccCCC
Q 001008 275 TGHDTKVMQNAT---DPPSKRSKIERKMDKIVYLLFSTLILISSTGSVFFGIETKRDIDGGKIRRWYLQPDDATVFYDPR 351 (1191)
Q Consensus 275 tG~~Tki~~~~~---~~~~k~s~l~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 351 (1191)
||.+|++.+... ..+.+++|+++.+++++..+..+.++++++.++++.+.. . .|
T Consensus 235 tG~~T~~g~i~~~~~~~~~~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~--------~~-------------- 291 (997)
T TIGR01106 235 TGDRTVMGRIASLASGLENGKTPIAIEIEHFIHIITGVAVFLGVSFFILSLILG-Y--------TW-------------- 291 (997)
T ss_pred ccccchhhHHHhhhhhcccCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-C--------CH--------------
Confidence 999998765543 556678999999999999988887777766655443211 0 12
Q ss_pred CchhHHHHHHHHHHHHhhccccchhhhHHHHHHHHHHHHHhhcccccccCCCCCccccCccccccccceeEEEecCCCcc
Q 001008 352 RAPLAAFLHFLTGLMLYGYLIPISLYISIEIVKVLQSVFINHDRDMYYEDTDKPARARTSNLNEELGQVDTILSDKTGTL 431 (1191)
Q Consensus 352 ~~~~~~~~~~~~~i~ll~~~iP~sL~v~~~~~~~~~~~~i~~d~~m~~~~~~~~~~v~~~~~~e~Lg~v~~i~~DKTGTL 431 (1191)
...+..++.+++.+||++|+++++++...++.++ +++++++|+++++|+||++++|||||||||
T Consensus 292 ------~~~~~~~i~v~v~~iP~~L~~~v~i~l~~~~~~m----------~~~~ilvk~~~aiE~lg~v~~ic~DKTGTL 355 (997)
T TIGR01106 292 ------LEAVIFLIGIIVANVPEGLLATVTVCLTLTAKRM----------ARKNCLVKNLEAVETLGSTSTICSDKTGTL 355 (997)
T ss_pred ------HHHHHHHHHHHhhcCCccchHHHHHHHHHHHHHH----------HHCCcEecCcHHHHHhcCCCEEEECCCCce
Confidence 2256667888888999999999999999999887 788999999999999999999999999999
Q ss_pred ccceeEEEEEEEcCeeeccchhHHHHHHHHhhCCcccccCCCCCCCCCCCCccccCCCccCCcccCChhhhcccCCCCCC
Q 001008 432 TCNSMEFVKCSVAGVAYGRVMTEVERTLAKRKGERTFEVDDSQTDAPGLNGNIVESGKSVKGFNFRDERIMNGQWVNEPH 511 (1191)
Q Consensus 432 T~n~m~~~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 511 (1191)
|+|+|+|+++++++..|..+..+ . ..+..+ ...
T Consensus 356 T~n~m~v~~~~~~~~~~~~~~~~-------------~----------------------~~~~~~------------~~~ 388 (997)
T TIGR01106 356 TQNRMTVAHMWFDNQIHEADTTE-------------D----------------------QSGVSF------------DKS 388 (997)
T ss_pred ecCceEEEEEEECCeEEecCCcc-------------C----------------------CCCccC------------Ccc
Confidence 99999999999988776432100 0 000000 011
Q ss_pred hHHHHHHHHHHhhhccceeccCCCC--CceEEecCCccHHHHHHHHHHcCcEEEeecCCeeEEEecCCCCccccceEEEE
Q 001008 512 SDVIQKFFRVLAICHTAIPDVNEET--GEISYEAESPDEAAFVIAAREVGFQFFGSSQTSISLHELDPVSGQKVNRVYEL 589 (1191)
Q Consensus 512 ~~~~~~~~~~lalC~~~~~~~~~~~--~~~~y~~~sp~e~Alv~~a~~~g~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i 589 (1191)
....+.++.++++||++....+... ....+..+||+|.||++++...+..... .+..|++
T Consensus 389 ~~~~~~ll~~~alcn~~~~~~~~~~~~~~~~~~~gdp~E~ALl~~a~~~~~~~~~------------------~~~~~~~ 450 (997)
T TIGR01106 389 SATWLALSRIAGLCNRAVFKAGQENVPILKRAVAGDASESALLKCIELCLGSVME------------------MRERNPK 450 (997)
T ss_pred cHHHHHHHHHHHHcCCCeeccccCCCcccccccCcChHHHHHHHHHHHhCCCHHH------------------HHhhCce
Confidence 2345578889999999876533211 0112446899999999999865432110 1456788
Q ss_pred eEeecccCCCceEEEEEEcC---CCcEEEEEeccchHHHHHHhhc---------ChhhHHHHHHHHHHHHhccceEEEEE
Q 001008 590 LHVLEFTSSRKRMSVMVRNP---ENQLLLLCKGADSVMFERLSKH---------GQQFEAETRRHINRYAEAGLRTLVIA 657 (1191)
Q Consensus 590 l~~~~F~s~rkrmsviv~~~---~~~~~l~~KGa~~~i~~~~~~~---------~~~~~~~~~~~l~~~a~~GlR~L~~A 657 (1191)
++.+||+|+||||+++++.. ++++++|+|||||.|+++|+.. +++.++.+.+.+++|+++|+|||++|
T Consensus 451 v~~~pF~s~rK~m~~v~~~~~~~~~~~~~~~KGApe~Il~~c~~~~~~g~~~~l~~~~~~~~~~~~~~~a~~GlRvla~A 530 (997)
T TIGR01106 451 VVEIPFNSTNKYQLSIHENEDPRDPRHLLVMKGAPERILERCSSILIHGKEQPLDEELKEAFQNAYLELGGLGERVLGFC 530 (997)
T ss_pred eEEeccCCCCceEEEEEeccCCCCceEEEEEeCChHHHHHHhhHHhcCCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEE
Confidence 99999999999999998743 2568999999999999999742 23456778888999999999999999
Q ss_pred EEecCHHHHHH-HHHHHHHHhhcchhhHHHHHHHHHHHhhccceEEEeeeecccccCCcHHHHHHHHHcCCeEEEEeCCC
Q 001008 658 YRELGEDEYRI-WEKEFLKAKTSVTSDREALVASAAEKIERDLILLGATAVEDKLQKGVPECIDKLAQAGIKVWVLTGDK 736 (1191)
Q Consensus 658 ~r~l~~~~~~~-~~~~~~~a~~~l~~~r~~~~~~~~~~iE~dl~llG~~~ieD~lr~~v~~~I~~L~~aGIkv~mlTGD~ 736 (1191)
||+++++++.+ |.. +++ ..+.+|+||+|+|+++++||+|++|+++|++|+++||+++|+|||+
T Consensus 531 ~k~l~~~~~~~~~~~-----------~~~-----~~~~~e~~L~flGli~i~Dplr~~v~~aI~~l~~~Gi~v~~~TGd~ 594 (997)
T TIGR01106 531 HLYLPDEQFPEGFQF-----------DTD-----DVNFPTDNLCFVGLISMIDPPRAAVPDAVGKCRSAGIKVIMVTGDH 594 (997)
T ss_pred EeecCcccccccccc-----------cch-----hhhccccCcEEEEEEeccCCChHHHHHHHHHHHHCCCeEEEECCCC
Confidence 99998765432 110 111 1134589999999999999999999999999999999999999999
Q ss_pred HhhHHHHHHHcCccccCceEEEEecCCchhhhhhhhcchHHHHHHHHHHHHHHHHhhcccccccccccceeEEEEeCchh
Q 001008 737 METAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQIREGISQVNSAKESKVTFGLVIDGKSL 816 (1191)
Q Consensus 737 ~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l 816 (1191)
..||.++|+++|+++++.... .++ . .+.....+.. +......++++|+++
T Consensus 595 ~~ta~~ia~~~gi~~~~~~~~---------~~i---------~--------~~~~~~~~~~----~~~~~~~~vi~G~~l 644 (997)
T TIGR01106 595 PITAKAIAKGVGIISEGNETV---------EDI---------A--------ARLNIPVSQV----NPRDAKACVVHGSDL 644 (997)
T ss_pred HHHHHHHHHHcCCCCCCccch---------hhh---------h--------hhcccccccc----ccccccceEEEhHHh
Confidence 999999999999987643210 000 0 0000000000 011123479999999
Q ss_pred hHHhHHHHHHHHHHHHhhcCceEEEcCChhhHHHHHHHhhcCCCEEEEEcCCccChHhhhhcceeEEe--ccCccchhhh
Q 001008 817 DFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLVKGTGKTTLAIGDGANDVGMLQEADIGVGI--SGVEGMQAVM 894 (1191)
Q Consensus 817 ~~~~~~~~~~~~~~l~~~~~~~v~~r~sP~qK~~iV~~l~~~g~~vl~iGDG~ND~~ml~~AdvGI~i--~g~e~~~a~~ 894 (1191)
+.+.++++. ++...++.+||||++|+||.++|+.+|+.|++|+|+|||+||+|||++|||||+| +|+++ |++
T Consensus 645 ~~l~~~el~----~~~~~~~~~VfaR~sPeqK~~IV~~lq~~g~vv~~~GDG~ND~paLk~AdVGiamg~~G~~v--ak~ 718 (997)
T TIGR01106 645 KDMTSEQLD----EILKYHTEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDV--SKQ 718 (997)
T ss_pred hhCCHHHHH----HHHHhcCCEEEEECCHHHHHHHHHHHHHCCCEEEEECCCcccHHHHhhCCcceecCCcccHH--HHH
Confidence 887765544 4444556679999999999999999999999999999999999999999999987 46777 899
Q ss_pred ccceeccc--hhhhhHhhhhhchhhhhHhhHhHHHHHHhHHHHHHHHHHHHhhhccccccchhHHHHHHHHHHhhhhhHH
Q 001008 895 SSDYAIAQ--FRFLERLLLVHGHWCYRRISMMICYFFYKNLTFGFTLFWYEAYASFSGRPAYNDWYMSCYNVFFTSLPVI 972 (1191)
Q Consensus 895 ~aD~vl~~--f~~l~~lll~~GR~~~~~i~~~i~~~~~~n~~~~~~~~~~~~~~~~s~~~~~~~~~~l~~n~~~~~~p~~ 972 (1191)
+||+++++ |+.++++ +.|||++|.|+++++.|.+++|+..+++.+++.++.. ..+++++|++|+|++++++|++
T Consensus 719 aADivL~dd~f~~Iv~a-i~~GR~i~~ni~k~i~~~l~~ni~~~~~~~~~~~~~~---~~pl~~~qlL~inli~d~lp~~ 794 (997)
T TIGR01106 719 AADMILLDDNFASIVTG-VEEGRLIFDNLKKSIAYTLTSNIPEITPFLIFIIANI---PLPLGTITILCIDLGTDMVPAI 794 (997)
T ss_pred hhceEEecCCHHHHHHH-HHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHcC---cchhHHHHHHHHHHHHHHHHHH
Confidence 99999998 7779998 8999999999999999999999999999999988753 3468899999999999999999
Q ss_pred hhhcccccCChhhhhcCccchhccccCCccchhhHHHhh-HhHHHHHHHHHHHHHhhhcccc------ccC---------
Q 001008 973 ALGVFDQDVSARLCLKYPLLYQEGVQNILFSWPRILGWM-SNGVLSAIIIFFFTTNSIFNQA------FRK--------- 1036 (1191)
Q Consensus 973 ~l~~~~~d~~~~~~~~~P~ly~~~~~~~~~~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~~~------~~~--------- 1036 (1191)
++++++ ++++.+.++|+ ..+...+++++++..|+ ..|++++++.|+.+++.+.... +..
T Consensus 795 al~~e~--~~~~~m~~~P~---~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 869 (997)
T TIGR01106 795 SLAYEK--AESDIMKRQPR---NPKTDKLVNERLISMAYGQIGMIQALGGFFTYFVILAENGFLPLHLVGLRVQWDDRWI 869 (997)
T ss_pred HHhcCC--CCcccccCCCc---CCccccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCccccccccccccccccc
Confidence 999844 56666666776 22467889888887765 4588888887776654432100 000
Q ss_pred CCc--ce--e---------hhhhhhHHhhHHHHHHHHHHHhhhccc--h----hhHHHHHHHHHHHHHHHHHHHhcCCCC
Q 001008 1037 DGH--AV--D---------YEVLGVAMYSSVVWAVNCQMALSINYF--T----WIQHFFIWGSIALWYIFLVVYGSLPPT 1097 (1191)
Q Consensus 1037 ~g~--~~--~---------~~~~~~~~f~~~v~~~~~~~~l~~~~~--~----~~~~~~i~~si~~~~i~~~i~~~~~~~ 1097 (1191)
++. .. . ...+.|+.|+++++.+.+..+. .|+. + .+.+..+++++++.++++++..++|.
T Consensus 870 ~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~~v~~q~~~~~~-~R~~~~~~f~~~~~n~~l~~~~~~~~~l~~~~~~~p~- 947 (997)
T TIGR01106 870 NDLEDSYGQEWTYEQRKYVEFTCHTAFFVSIVVVQWADLII-CKTRRNSVFQQGMKNKILIFGLFEETALAAFLSYCPG- 947 (997)
T ss_pred cccccccccccchhcccchhhhhhHHHHHHHHHHHHHHHHH-hccCcccccccCCcCHHHHHHHHHHHHHHHHHHHhhh-
Confidence 000 00 0 0145788888888877666543 2221 1 14567788888888888887888874
Q ss_pred CcchhHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 001008 1098 FSTTAYKVLVEACAPSILYWLTTLLVVVSTLLPYFLYRAFQTRF 1141 (1191)
Q Consensus 1098 ~~~~~~~~~~~~~~~s~~~wl~~l~~~~~~ll~~~i~k~~~~~~ 1141 (1191)
++. +|+..++++.+|+.++.+.++.++..++.|+++|++
T Consensus 948 ~~~-----~f~~~~l~~~~w~~~~~~~~~~~~~~~~~k~~~r~~ 986 (997)
T TIGR01106 948 MGV-----ALRMYPLKPTWWFCAFPYSLLIFVYDEIRKLIIRRN 986 (997)
T ss_pred hHH-----HhccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 243 677888999999999999999999999999988764
No 10
>TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522.
Probab=100.00 E-value=2.2e-106 Score=1030.32 Aligned_cols=866 Identities=22% Similarity=0.237 Sum_probs=652.7
Q ss_pred HHHHHHHHHHHHHHHHHHHhccc-CCc-----CCCchhhHHHHHHHHHHHHHHHHHHHHHhhhHHHHh---cceEEEEec
Q 001008 75 LFEQFRRVANIYFLVVAFVSFSP-LAP-----YSAPSVLAPLIVVIGATMAKEGVEDWRRRKQDIEAN---NRKVKVYGQ 145 (1191)
Q Consensus 75 l~~qf~~~~n~~fl~~~il~~~~-~~~-----~~~~~~~~~l~~vl~~~~i~~~~~d~~r~k~~~~~n---~~~~~V~r~ 145 (1191)
+++||+++++++++++++++++. +.+ ...|...+.++++++++++...+++++..++.+.+. +.+++|+|
T Consensus 1 ~~~~f~~~~~~iL~~aa~ls~~~~~~~~~~~~~~~~~~~~~Il~vi~~~~~i~~~qe~~a~~~~~~L~~~~~~~~~ViR- 79 (917)
T TIGR01116 1 VLEQFEDLLVRILLLAACVSFVLAWFEEGEETVTAFVEPFVILLILVANAIVGVWQERNAEKAIEALKEYESEHAKVLR- 79 (917)
T ss_pred ChHHHhCHHHHHHHHHHHHHHHHhcccccccccccHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEE-
Confidence 46899999999999999999985 211 123445566778888888889999999988866664 67899999
Q ss_pred CCeEEEEeccccccccEEEEeCCCcccceEEEEeeeCCCceEEEEeccCCcccccEeecchhhhcccCChhhhcccceEE
Q 001008 146 DHTFVETKWKNLRVGDLVKVHKDEYFPADLLLLSSIYEDGICYVETMNLDGETNLKLKRSLEATNHLRDEESFQKFTAVI 225 (1191)
Q Consensus 146 ~g~~~~i~~~~L~vGDIV~l~~ge~iPaD~~lL~ss~~~g~~~Vd~s~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~~~i 225 (1191)
||++++|+++||+|||||.|++||.|||||+|+++++ |.||||+|||||.|+.|.+......
T Consensus 80 dg~~~~I~~~~Lv~GDiv~l~~Gd~IPaD~~ll~~~~----l~VdeS~LTGES~pv~K~~~~~~~~-------------- 141 (917)
T TIGR01116 80 DGRWSVIKAKDLVPGDIVELAVGDKVPADIRVLSLKT----LRVDQSILTGESVSVNKHTESVPDE-------------- 141 (917)
T ss_pred CCEEEEEEHHHCCCCCEEEECCCCEeeccEEEEEecc----eEEEcccccCCCCcccccccccCcc--------------
Confidence 9999999999999999999999999999999999764 9999999999999999987532100
Q ss_pred EeecCCCCceeeEEEEEEcCeeeccCCCceeecCcEeecCCeEEEEEEEecchhhHh---hccCCCCCCCCHHHHHHHHH
Q 001008 226 KCEDPNERLYSFVGTLQYEGKQYPLSPQQILLRDSKLKNTDYVYGVVVFTGHDTKVM---QNATDPPSKRSKIERKMDKI 302 (1191)
Q Consensus 226 ~~e~pn~~~~~f~Gt~~~~g~~~~l~~~n~l~rgs~l~nt~~~~gvVv~tG~~Tki~---~~~~~~~~k~s~l~~~~~~~ 302 (1191)
...+.+.+|++++||.+.+ |++.|+|++||.+|++. ++...++.+++|++++++++
T Consensus 142 --------------------~~~~~~~~n~l~~GT~v~~-G~~~~~V~~tG~~T~~gki~~~~~~~~~~~t~lq~~l~~~ 200 (917)
T TIGR01116 142 --------------------RAVNQDKKNMLFSGTLVVA-GKARGVVVRTGMSTEIGKIRDEMRAAEQEDTPLQKKLDEF 200 (917)
T ss_pred --------------------ccCcccccceeeeCCEEec-ceEEEEEEEeCCCCHHHHHHHHhhccCCCCCCHHHHHHHH
Confidence 0112334566666666665 55999999999999765 45667778899999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhhhh-cccccCCCccccccccCCCCCcccCCCCchhHHHHHHHHHHHHhhccccchhhhHHH
Q 001008 303 VYLLFSTLILISSTGSVFFGIE-TKRDIDGGKIRRWYLQPDDATVFYDPRRAPLAAFLHFLTGLMLYGYLIPISLYISIE 381 (1191)
Q Consensus 303 ~~~~~~~~~~~~~i~~i~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ll~~~iP~sL~v~~~ 381 (1191)
+..++.+.++++++.++++..+ ...... ..| ...++..+..++++++.+||++||++++
T Consensus 201 ~~~l~~~~~~~~~i~~~~~~~~~~~~~~~----~~~----------------~~~~~~~~~~~i~l~v~~iP~~Lp~~vt 260 (917)
T TIGR01116 201 GELLSKVIGLICILVWVINIGHFNDPALG----GGW----------------IQGAIYYFKIAVALAVAAIPEGLPAVIT 260 (917)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcccccc----chh----------------HHHHHHHHHHHHhhhhhccccccHHHHH
Confidence 9988887777777665543221 100000 011 1123445667788999999999999999
Q ss_pred HHHHHHHHHHhhcccccccCCCCCccccCccccccccceeEEEecCCCccccceeEEEEEEEcCeeeccchhHHHHHHHH
Q 001008 382 IVKVLQSVFINHDRDMYYEDTDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFVKCSVAGVAYGRVMTEVERTLAK 461 (1191)
Q Consensus 382 ~~~~~~~~~i~~d~~m~~~~~~~~~~v~~~~~~e~Lg~v~~i~~DKTGTLT~n~m~~~~~~i~~~~y~~~~~~~~~~~~~ 461 (1191)
++...++.++ +++++++|+++++|+||++++||||||||||+|+|+|++++..+..+....
T Consensus 261 i~l~~~~~~m----------~~~~ilvk~~~~iE~lg~v~~ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~--------- 321 (917)
T TIGR01116 261 TCLALGTRKM----------AKKNAIVRKLPSVETLGCTTVICSDKTGTLTTNQMSVCKVVALDPSSSSLN--------- 321 (917)
T ss_pred HHHHHHHHHH----------HHCCcEecCcHHHHhccCceEEEecCCccccCCeEEEEEEEecCCcccccc---------
Confidence 9999999988 778999999999999999999999999999999999999987654321000
Q ss_pred hhCCcccccCCCCCCCCCCCCccccCCCccCCcccCCh-hhhc-ccCCCCCChHHHHHHHHHHhhhccceeccCCCCCce
Q 001008 462 RKGERTFEVDDSQTDAPGLNGNIVESGKSVKGFNFRDE-RIMN-GQWVNEPHSDVIQKFFRVLAICHTAIPDVNEETGEI 539 (1191)
Q Consensus 462 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~-~l~~-~~~~~~~~~~~~~~~~~~lalC~~~~~~~~~~~~~~ 539 (1191)
..+ . .+..|... .... ............++++.++++||++....++..+.+
T Consensus 322 ----~~~--------~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~lc~~~~~~~~~~~~~~ 375 (917)
T TIGR01116 322 ----EFC--------V--------------TGTTYAPEGGVIKDDGPVAGGQDAGLEELATIAALCNDSSLDFNERKGVY 375 (917)
T ss_pred ----eEE--------e--------------cCCccCCCccccccCCcccccchHHHHHHHHHHHhcCCCeeeccccCCce
Confidence 000 0 00000000 0000 000001123456788999999999877543322222
Q ss_pred EEecCCccHHHHHHHHHHcCcEEEeecCCeeEEEecCCCCccccceEEEEeEeecccCCCceEEEEEEcCCCcEEEEEec
Q 001008 540 SYEAESPDEAAFVIAAREVGFQFFGSSQTSISLHELDPVSGQKVNRVYELLHVLEFTSSRKRMSVMVRNPENQLLLLCKG 619 (1191)
Q Consensus 540 ~y~~~sp~e~Alv~~a~~~g~~~~~~~~~~~~i~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KG 619 (1191)
.. .+||+|.||++++++.|+....+..+.+.....+.. ......|++++.+||||+||||||+++. ++++.+|+||
T Consensus 376 ~~-~gdp~E~ALl~~~~~~g~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~pF~s~rK~msviv~~-~~~~~~~~KG 451 (917)
T TIGR01116 376 EK-VGEATEAALKVLVEKMGLPATKNGVSSKRRPALGCN--SVWNDKFKKLATLEFSRDRKSMSVLCKP-STGNKLFVKG 451 (917)
T ss_pred ee-ccChhHHHHHHHHHHcCCCchhcccccccccccchh--HHHHhhcceeeecccChhhCeEEEEEee-CCcEEEEEcC
Confidence 22 479999999999999998776554433333222110 0014568899999999999999999996 4678999999
Q ss_pred cchHHHHHHhhc----------ChhhHHHHHHHHHHHHh-ccceEEEEEEEecCHHHHHHHHHHHHHHhhcchhhHHHHH
Q 001008 620 ADSVMFERLSKH----------GQQFEAETRRHINRYAE-AGLRTLVIAYRELGEDEYRIWEKEFLKAKTSVTSDREALV 688 (1191)
Q Consensus 620 a~~~i~~~~~~~----------~~~~~~~~~~~l~~~a~-~GlR~L~~A~r~l~~~~~~~~~~~~~~a~~~l~~~r~~~~ 688 (1191)
|||.|+++|+.. +++.++++.+++++|++ +|+|||++|||.+++++.. +. . .+
T Consensus 452 Ape~il~~c~~~~~~~g~~~~l~~~~~~~i~~~~~~~a~~~GlRvl~~A~k~~~~~~~~-~~---------~-~~----- 515 (917)
T TIGR01116 452 APEGVLERCTHILNGDGRAVPLTDKMKNTILSVIKEMGTTKALRCLALAFKDIPDPREE-DL---------L-SD----- 515 (917)
T ss_pred ChHHHHHhccceecCCCCeeeCCHHHHHHHHHHHHHHHhhcCCeEEEEEEEECCccccc-cc---------c-cc-----
Confidence 999999999742 13456778889999999 9999999999999764321 00 0 01
Q ss_pred HHHHHHhhccceEEEeeeecccccCCcHHHHHHHHHcCCeEEEEeCCCHhhHHHHHHHcCccccCceEEEEecCCchhhh
Q 001008 689 ASAAEKIERDLILLGATAVEDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEA 768 (1191)
Q Consensus 689 ~~~~~~iE~dl~llG~~~ieD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~ 768 (1191)
....+.+|+||+|+|+++++||+|++++++|+.||++||++||+|||+.+||.++|+++|+..++..+.
T Consensus 516 ~~~~~~~e~~l~~lGl~~~~Dplr~~v~e~I~~l~~aGI~v~miTGD~~~tA~~ia~~~gi~~~~~~v~----------- 584 (917)
T TIGR01116 516 PANFEAIESDLTFIGVVGMLDPPRPEVADAIEKCRTAGIRVIMITGDNKETAEAICRRIGIFSPDEDVT----------- 584 (917)
T ss_pred chhhhhhcCCcEEEEEeeeeCCCchhHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHcCCCCCCcccc-----------
Confidence 012356899999999999999999999999999999999999999999999999999999976542211
Q ss_pred hhhhcchHHHHHHHHHHHHHHHHhhcccccccccccceeEEEEeCchhhHHhHHHHHHHHHHHHhhcCceEEEcCChhhH
Q 001008 769 LEKQGDKENITKVSLESVTKQIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQK 848 (1191)
Q Consensus 769 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~l~~~~~~~v~~r~sP~qK 848 (1191)
...++|++++.+.++++.. ..++.+||||++|+||
T Consensus 585 ---------------------------------------~~~~~g~~l~~~~~~~~~~------~~~~~~v~ar~~P~~K 619 (917)
T TIGR01116 585 ---------------------------------------FKSFTGREFDEMGPAKQRA------ACRSAVLFSRVEPSHK 619 (917)
T ss_pred ---------------------------------------ceeeeHHHHhhCCHHHHHH------hhhcCeEEEecCHHHH
Confidence 1245666665443333222 1235679999999999
Q ss_pred HHHHHHhhcCCCEEEEEcCCccChHhhhhcceeEEe-ccCccchhhhccceeccc--hhhhhHhhhhhchhhhhHhhHhH
Q 001008 849 ALVTRLVKGTGKTTLAIGDGANDVGMLQEADIGVGI-SGVEGMQAVMSSDYAIAQ--FRFLERLLLVHGHWCYRRISMMI 925 (1191)
Q Consensus 849 ~~iV~~l~~~g~~vl~iGDG~ND~~ml~~AdvGI~i-~g~e~~~a~~~aD~vl~~--f~~l~~lll~~GR~~~~~i~~~i 925 (1191)
.++|+.+|..|++|+|+|||.||++||++|||||+| +|++. |+++||+++.+ |+.+.++ +.|||++|.|+++++
T Consensus 620 ~~iV~~lq~~g~~va~iGDG~ND~~alk~AdVGia~g~g~~~--ak~aAD~vl~dd~f~~i~~~-i~~GR~~~~ni~k~i 696 (917)
T TIGR01116 620 SELVELLQEQGEIVAMTGDGVNDAPALKKADIGIAMGSGTEV--AKEASDMVLADDNFATIVAA-VEEGRAIYNNMKQFI 696 (917)
T ss_pred HHHHHHHHhcCCeEEEecCCcchHHHHHhCCeeEECCCCcHH--HHHhcCeEEccCCHHHHHHH-HHHHHHHHHHHHHHH
Confidence 999999998999999999999999999999999999 45555 78999999998 8889999 799999999999999
Q ss_pred HHHHHhHHHHHHHHHHHHhhhccccccchhHHHHHHHHHHhhhhhHHhhhcccccCChhhhhcCccchhccccCCccchh
Q 001008 926 CYFFYKNLTFGFTLFWYEAYASFSGRPAYNDWYMSCYNVFFTSLPVIALGVFDQDVSARLCLKYPLLYQEGVQNILFSWP 1005 (1191)
Q Consensus 926 ~~~~~~n~~~~~~~~~~~~~~~~s~~~~~~~~~~l~~n~~~~~~p~~~l~~~~~d~~~~~~~~~P~ly~~~~~~~~~~~~ 1005 (1191)
.|.+++|+..+++.+++.++. ...+|+++|++|+|++++.+|++++++++ ++++.+.++|+ .+++++++++
T Consensus 697 ~~~l~~ni~~~~~~~~~~~~~---~~~pl~~~qll~inli~d~lp~~~l~~~~--~~~~~m~~pP~----~~~~~l~~~~ 767 (917)
T TIGR01116 697 RYMISSNIGEVVCIFLTAALG---IPEGLIPVQLLWVNLVTDGLPATALGFNP--PDKDIMWKPPR----RPDEPLITGW 767 (917)
T ss_pred HHHHhccHHHHHHHHHHHHHc---CCchHHHHHHHHHHHHHHHHHHHHHhcCC--cchhHhcCCCC----CCCCCcccHH
Confidence 999999999999999987763 23579999999999999999999999865 44555555665 5678999999
Q ss_pred hHHHhhHhHHHHHHHHHHHHHhhhcc-ccccC-----------CCcc----eehhhhhhHHhhHHHHHHHHHHHhhhc-c
Q 001008 1006 RILGWMSNGVLSAIIIFFFTTNSIFN-QAFRK-----------DGHA----VDYEVLGVAMYSSVVWAVNCQMALSIN-Y 1068 (1191)
Q Consensus 1006 ~~~~~~~~~~~~~~v~~~~~~~~~~~-~~~~~-----------~g~~----~~~~~~~~~~f~~~v~~~~~~~~l~~~-~ 1068 (1191)
+++.|++.|++++++.++.+++.+.. ..... ++.. .......|++|+++++.+.+..+...+ .
T Consensus 768 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~~v~~q~~~~~~~r~~~ 847 (917)
T TIGR01116 768 LFFRYLVVGVYVGLATVGGFVWWYLLTHFTGCDEDSFTTCPDFEDPDCYVFEGKQPARTISLSVLVVIEMFNALNALSED 847 (917)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcCcccccccccccccccccccccccccccchHHHHHHHHHHHHHHHHHHHcCCc
Confidence 99999999999998866555443221 11000 1100 012345688888888877666543221 1
Q ss_pred ---c--hhhHHHHHHHHHHHHHHHHHHHhcCCCCCcchhHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHHHHH
Q 001008 1069 ---F--TWIQHFFIWGSIALWYIFLVVYGSLPPTFSTTAYKVLVEACAPSILYWLTTLLVVVSTLLPYFLYRAFQT 1139 (1191)
Q Consensus 1069 ---~--~~~~~~~i~~si~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~s~~~wl~~l~~~~~~ll~~~i~k~~~~ 1139 (1191)
| ..+.|.++++++++.++++++..++|. ++. +|+..++++..|+.++.++++.++.+++.|+++|
T Consensus 848 ~~~~~~~~~~n~~~~~~~~~~~~l~~~~~~v~~-~~~-----~f~~~~l~~~~w~~~~~~~~~~~~~~e~~k~~~~ 917 (917)
T TIGR01116 848 QSLLRMPPWVNKWLIGAICLSMALHFLILYVPF-LSR-----IFGVTPLSLTDWLMVLKLSLPVILVDEVLKFFSR 917 (917)
T ss_pred ccccccCCccCHHHHHHHHHHHHHHHHHHHhHH-HHH-----HhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 2 124677888888888888888888884 243 6778899999999999999999999999998764
No 11
>TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others.
Probab=100.00 E-value=1.8e-106 Score=1035.30 Aligned_cols=836 Identities=20% Similarity=0.243 Sum_probs=638.5
Q ss_pred CccccccCCCCceeecCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHhccc--CCc-------C-CCchh---hHHHHHH
Q 001008 47 NPEVVQLNYRGNYVSTTKYTAANFIPKSLFEQFRRVANIYFLVVAFVSFSP--LAP-------Y-SAPSV---LAPLIVV 113 (1191)
Q Consensus 47 ~~~~~~~~~g~N~i~~~k~~~~~flp~~l~~qf~~~~n~~fl~~~il~~~~--~~~-------~-~~~~~---~~~l~~v 113 (1191)
+.++|+++||+|+++.++.+.+. +.+++||+++++++|+++++++++. ..+ . +|+.. +++++++
T Consensus 65 ev~~r~~~yG~N~l~~~~~~s~~---~~~~~~f~~~~~~~l~~~ails~~~~~~~~~~~~~~~~~~~~~~~~il~~v~~~ 141 (941)
T TIGR01517 65 TLERREKVYGKNELPEKPPKSFL---QIVWAALSDQTLILLSVAAVVSLVLGLPEPGEGKADTETGWIEGVAILVSVILV 141 (941)
T ss_pred HHHHHHHHhCCCCCCCCCCCCHH---HHHHHHHhCHHHHHHHHHHHHHHHHhhcccccccCccccchHHHHHHHHHHHHH
Confidence 35678999999999999886543 7899999999999999999999873 101 1 22222 3344445
Q ss_pred HHHHHHHHHHHHHHHhhhHHHHhcceEEEEecCCeEEEEeccccccccEEEEeCCCcccceEEEEeeeCCCceEEEEecc
Q 001008 114 IGATMAKEGVEDWRRRKQDIEANNRKVKVYGQDHTFVETKWKNLRVGDLVKVHKDEYFPADLLLLSSIYEDGICYVETMN 193 (1191)
Q Consensus 114 l~~~~i~~~~~d~~r~k~~~~~n~~~~~V~r~~g~~~~i~~~~L~vGDIV~l~~ge~iPaD~~lL~ss~~~g~~~Vd~s~ 193 (1191)
++++++.++.++++.++.++..++.+++|+| ||++++|++++|+|||||.|++||.|||||+|++++ .+.||||+
T Consensus 142 ~~i~~~~e~~~~~~~~~l~~~~~~~~~~ViR-dG~~~~I~~~~Lv~GDiV~l~~Gd~IPaD~~li~g~----~l~VdES~ 216 (941)
T TIGR01517 142 VLVTAVNDYKKELQFRQLNREKSAQKIAVIR-GGQEQQISIHDIVVGDIVSLSTGDVVPADGVFISGL----SLEIDESS 216 (941)
T ss_pred hHHHHHHHHHHHHHHHHHHhccCCCceEEEE-CCEEEEEeHHHCCCCCEEEECCCCEecccEEEEEcC----cEEEEecc
Confidence 5566666666666666655445678999999 999999999999999999999999999999999953 39999999
Q ss_pred CCcccccEeecchhhhcccCChhhhcccceEEEeecCCCCceeeEEEEEEcCeeeccCCCceeecCcEeecCCeEEEEEE
Q 001008 194 LDGETNLKLKRSLEATNHLRDEESFQKFTAVIKCEDPNERLYSFVGTLQYEGKQYPLSPQQILLRDSKLKNTDYVYGVVV 273 (1191)
Q Consensus 194 LtGEs~~~~K~~~~~~~~~~~~~~~~~~~~~i~~e~pn~~~~~f~Gt~~~~g~~~~l~~~n~l~rgs~l~nt~~~~gvVv 273 (1191)
|||||.|+.|.+++.. +.|+||.+.+|. +.|+|+
T Consensus 217 LTGES~pv~K~~~~~n-------------------------~v~~GT~v~~G~---------------------~~~iV~ 250 (941)
T TIGR01517 217 ITGESDPIKKGAPKDS-------------------------FLLSGTVVNEGS---------------------GRMLVT 250 (941)
T ss_pred cCCCCCcccccCCCCc-------------------------eEEeCCeEEeeE---------------------EEEEEE
Confidence 9999999999864321 458888888877 999999
Q ss_pred Eecchhh---HhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhh-cccccCCCccccccccCCCCCcccC
Q 001008 274 FTGHDTK---VMQNATDPPSKRSKIERKMDKIVYLLFSTLILISSTGSVFFGIE-TKRDIDGGKIRRWYLQPDDATVFYD 349 (1191)
Q Consensus 274 ~tG~~Tk---i~~~~~~~~~k~s~l~~~~~~~~~~~~~~~~~~~~i~~i~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 349 (1191)
+||.+|. +..+...++ +++|+++.++++...+..+.++++++.++++.+. .... .|... ..
T Consensus 251 ~tG~~T~~gki~~~~~~~~-~~t~l~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~~~~~-------~~~~~-------~~ 315 (941)
T TIGR01517 251 AVGVNSFGGKLMMELRAEG-EDTPLQEKLSELAGLIGKFGMGSAVLLFLVLSLRYVFRI-------IRGDG-------RD 315 (941)
T ss_pred EeCCCcHHHHHHHhhccCC-CCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh-------ccccc-------cc
Confidence 9999994 455555544 4579999999999988877777776665554321 0000 00000 00
Q ss_pred CCCchhHHHHHHHHHHHHhhccccchhhhHHHHHHHHHHHHHhhcccccccCCCCCccccCccccccccceeEEEecCCC
Q 001008 350 PRRAPLAAFLHFLTGLMLYGYLIPISLYISIEIVKVLQSVFINHDRDMYYEDTDKPARARTSNLNEELGQVDTILSDKTG 429 (1191)
Q Consensus 350 ~~~~~~~~~~~~~~~i~ll~~~iP~sL~v~~~~~~~~~~~~i~~d~~m~~~~~~~~~~v~~~~~~e~Lg~v~~i~~DKTG 429 (1191)
+......+...+..++.+++.+||++|+++++++...++.++ +++++++|+++++|+||++++|||||||
T Consensus 316 ~~~~~~~~~~~~~~al~llv~~iP~~Lp~~vti~l~~~~~~m----------ak~~ilvk~l~a~E~lg~v~~Ic~DKTG 385 (941)
T TIGR01517 316 TEEDAQTFLDHFIIAVTIVVVAVPEGLPLAVTIALAYSMKKM----------MKDNNLVRHLAACETMGSATAICSDKTG 385 (941)
T ss_pred cchhhHHHHHHHHHHHHHHHhhCCCchHHHHHHHHHHHHHHH----------HhCCCEEechHHhhhccCceEEEEcCcC
Confidence 000112345578889999999999999999999999888877 8899999999999999999999999999
Q ss_pred ccccceeEEEEEEEcCeeeccchhHHHHHHHHhhCCcccccCCCCCCCCCCCCccccCCCccCCcccCChhhhcccCCCC
Q 001008 430 TLTCNSMEFVKCSVAGVAYGRVMTEVERTLAKRKGERTFEVDDSQTDAPGLNGNIVESGKSVKGFNFRDERIMNGQWVNE 509 (1191)
Q Consensus 430 TLT~n~m~~~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 509 (1191)
|||+|+|+|++++..+..|+.+. +..
T Consensus 386 TLT~n~m~v~~~~~~~~~~~~~~------------------------------------------------~~~------ 411 (941)
T TIGR01517 386 TLTQNVMSVVQGYIGEQRFNVRD------------------------------------------------VLR------ 411 (941)
T ss_pred ceeeceEEEEEEEEecceEecCc------------------------------------------------ccc------
Confidence 99999999999987664443210 000
Q ss_pred CChHHHHHHHHHHhhhccceeccCCCCCceEEecCCccHHHHHHHHHHcCcEEEeecCCeeEEEecCCCCccccceEEEE
Q 001008 510 PHSDVIQKFFRVLAICHTAIPDVNEETGEISYEAESPDEAAFVIAAREVGFQFFGSSQTSISLHELDPVSGQKVNRVYEL 589 (1191)
Q Consensus 510 ~~~~~~~~~~~~lalC~~~~~~~~~~~~~~~y~~~sp~e~Alv~~a~~~g~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i 589 (1191)
..+....+++...+.||+..+...++.+ ..+..+||+|.|+++++++.|..... ....+++
T Consensus 412 ~~~~~~~~~l~~~~~~~s~~~~~~~~~~-~~~~~g~p~e~All~~~~~~~~~~~~------------------~~~~~~~ 472 (941)
T TIGR01517 412 NVPKHVRNILVEGISLNSSSEEVVDRGG-KRAFIGSKTECALLGFLLLLGRDYQE------------------VRAEEKV 472 (941)
T ss_pred cCCHHHHHHHHHHHHhCCCCccccCCCC-ccccCCCccHHHHHHHHHHcCCCHHH------------------HHhhchh
Confidence 0012344555555666655442211111 12456899999999999887743211 1245678
Q ss_pred eEeecccCCCceEEEEEEcCCCcEEEEEeccchHHHHHHhhc----Ch-----hhHHHHHHHHHHHHhccceEEEEEEEe
Q 001008 590 LHVLEFTSSRKRMSVMVRNPENQLLLLCKGADSVMFERLSKH----GQ-----QFEAETRRHINRYAEAGLRTLVIAYRE 660 (1191)
Q Consensus 590 l~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~----~~-----~~~~~~~~~l~~~a~~GlR~L~~A~r~ 660 (1191)
++.+||+|+||||+++++.+++++++++|||||.|+++|+.. +. +.++++.+.+++++.+|+||+++|||+
T Consensus 473 ~~~~pF~s~~k~msvv~~~~~~~~~~~~KGA~e~il~~c~~~~~~~g~~~~~~~~~~~i~~~~~~~a~~G~Rvl~~A~~~ 552 (941)
T TIGR01517 473 VKIYPFNSERKFMSVVVKHSGGKVREFRKGASEIVLKPCRKRLDSNGEATPISDDKDRCADVIEPLASDALRTICLAYRD 552 (941)
T ss_pred ccccccCCCCCeEEEEEEeCCCcEEEEEECChHHHHHhhhHHhhcCCCcccCcHHHHHHHHHHHHHHhcCCEEEEEEEEe
Confidence 889999999999999999877889999999999999999752 11 135678888999999999999999999
Q ss_pred cCHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHHhhccceEEEeeeecccccCCcHHHHHHHHHcCCeEEEEeCCCHhhH
Q 001008 661 LGEDEYRIWEKEFLKAKTSVTSDREALVASAAEKIERDLILLGATAVEDKLQKGVPECIDKLAQAGIKVWVLTGDKMETA 740 (1191)
Q Consensus 661 l~~~~~~~~~~~~~~a~~~l~~~r~~~~~~~~~~iE~dl~llG~~~ieD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta 740 (1191)
++.+++.+| +..|+||+|+|+++++||+|++++++|+.|+++||++||+|||+..||
T Consensus 553 ~~~~~~~~~-----------------------~~~e~~l~~lGli~~~Dplr~~~~~aI~~l~~aGI~v~miTGD~~~tA 609 (941)
T TIGR01517 553 FAPEEFPRK-----------------------DYPNGGLTLIGVVGIKDPLRPGVREAVQECQRAGITVRMVTGDNIDTA 609 (941)
T ss_pred cCccccccc-----------------------cccccCcEEEEEeeccCCCchhHHHHHHHHHHCCCEEEEECCCChHHH
Confidence 876543221 234789999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCccccCceEEEEecCCchhhhhhhhcchHHHHHHHHHHHHHHHHhhcccccccccccceeEEEEeCchhhHHh
Q 001008 741 INIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQIREGISQVNSAKESKVTFGLVIDGKSLDFAL 820 (1191)
Q Consensus 741 ~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~ 820 (1191)
.+||++|||.+++. .+++|++++.+.
T Consensus 610 ~~iA~~~GI~~~~~------------------------------------------------------~vi~G~~~~~l~ 635 (941)
T TIGR01517 610 KAIARNCGILTFGG------------------------------------------------------LAMEGKEFRRLV 635 (941)
T ss_pred HHHHHHcCCCCCCc------------------------------------------------------eEeeHHHhhhCC
Confidence 99999999975432 267777777665
Q ss_pred HHHHHHHHHHHHhhcCceEEEcCChhhHHHHHHHhhcCCCEEEEEcCCccChHhhhhcceeEEe--ccCccchhhhccce
Q 001008 821 DKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLVKGTGKTTLAIGDGANDVGMLQEADIGVGI--SGVEGMQAVMSSDY 898 (1191)
Q Consensus 821 ~~~~~~~~~~l~~~~~~~v~~r~sP~qK~~iV~~l~~~g~~vl~iGDG~ND~~ml~~AdvGI~i--~g~e~~~a~~~aD~ 898 (1191)
++++.+.+. +..||||++|+||.++|+.+|+.|++|+|+|||.||+|||++||||||| +|++. |+++||+
T Consensus 636 ~~el~~~i~------~~~Vfar~sPe~K~~iV~~lq~~g~vVam~GDGvNDapALk~AdVGIAmg~~gtdv--Ak~aADi 707 (941)
T TIGR01517 636 YEEMDPILP------KLRVLARSSPLDKQLLVLMLKDMGEVVAVTGDGTNDAPALKLADVGFSMGISGTEV--AKEASDI 707 (941)
T ss_pred HHHHHHHhc------cCeEEEECCHHHHHHHHHHHHHCCCEEEEECCCCchHHHHHhCCcceecCCCccHH--HHHhCCE
Confidence 555554433 3469999999999999999999999999999999999999999999988 46676 8999999
Q ss_pred eccc--hhhhhHhhhhhchhhhhHhhHhHHHHHHhHHHHHHHHHHHHhhhccccccchhHHHHHHHHHHhhhhhHHhhhc
Q 001008 899 AIAQ--FRFLERLLLVHGHWCYRRISMMICYFFYKNLTFGFTLFWYEAYASFSGRPAYNDWYMSCYNVFFTSLPVIALGV 976 (1191)
Q Consensus 899 vl~~--f~~l~~lll~~GR~~~~~i~~~i~~~~~~n~~~~~~~~~~~~~~~~s~~~~~~~~~~l~~n~~~~~~p~~~l~~ 976 (1191)
++++ |+.+.++ +.|||++|+|+++++.|.+++|+..+++.+++.++.+ .++++++|++|+|++++++|+++++.
T Consensus 708 vL~dd~f~~I~~~-i~~gR~~~~ni~k~i~~~l~~n~~~i~~~~~~~~~~~---~~pl~~~qil~inl~~d~~~al~l~~ 783 (941)
T TIGR01517 708 ILLDDNFASIVRA-VKWGRNVYDNIRKFLQFQLTVNVVAVILTFVGSCISS---TSPLTAVQLLWVNLIMDTLAALALAT 783 (941)
T ss_pred EEecCCHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc---cccHHHHHHHHHHHHHHHhhHHHHcc
Confidence 9995 7779999 7999999999999999999999999999888877753 45799999999999999999999986
Q ss_pred ccccCChhhhhcCccchhccccCCccchhhHHHhhHhHHHHHHHHHHHHHhhhccc-cccCCC-cceehhhhhhHHhhHH
Q 001008 977 FDQDVSARLCLKYPLLYQEGVQNILFSWPRILGWMSNGVLSAIIIFFFTTNSIFNQ-AFRKDG-HAVDYEVLGVAMYSSV 1054 (1191)
Q Consensus 977 ~~~d~~~~~~~~~P~ly~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~-~~~~~g-~~~~~~~~~~~~f~~~ 1054 (1191)
+ ++++.+|++|+. .+..+++++.++..|+++|++++++.|++.++..... .....+ .........|++|.++
T Consensus 784 e---~~~~~lm~~~P~---~~~~~li~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~~ 857 (941)
T TIGR01517 784 E---PPTEALLDRKPI---GRNAPLISRSMWKNILGQAGYQLVVTFILLFAGGSIFDVSGPDEITSHQQGELNTIVFNTF 857 (941)
T ss_pred C---CccHHHHhCCCC---CCCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCcccccccccchhhHHHHHHH
Confidence 4 444556655552 5677889999999999999999998887765432100 000000 0001234568888888
Q ss_pred HHHHHHHHHhhhc-----cc-hhhHHHHHHHHHHHHHHHHHHHhcCCCCCcchhHHHHHHHHhcCHhHHHHHHHHHHHHH
Q 001008 1055 VWAVNCQMALSIN-----YF-TWIQHFFIWGSIALWYIFLVVYGSLPPTFSTTAYKVLVEACAPSILYWLTTLLVVVSTL 1128 (1191)
Q Consensus 1055 v~~~~~~~~l~~~-----~~-~~~~~~~i~~si~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~s~~~wl~~l~~~~~~l 1128 (1191)
++...+..+.... .| .++.|.++++++++.+++++++..+ ++. +|+..++++..|+.+++++++.+
T Consensus 858 v~~~~~~~~~~r~~~~~~~~~~~~~n~~~~~~~~~~~~l~~~~~~~---~~~-----~f~~~~l~~~~w~~~~~~~~~~~ 929 (941)
T TIGR01517 858 VLLQLFNEINARKLYERNVFEGLFKNRIFVTIMGFTFGFQVIIVEF---GGS-----FFSTVSLSIEQWIGCVLLGMLSL 929 (941)
T ss_pred HHHHHHHHHHHccCCcccccccccccHHHHHHHHHHHHHHHHHHHH---HHH-----HhcccCCCHHHHHHHHHHHHHHH
Confidence 8777666543211 12 2356677787777777777665532 122 66778889999999999999888
Q ss_pred HHHHHHHHH
Q 001008 1129 LPYFLYRAF 1137 (1191)
Q Consensus 1129 l~~~i~k~~ 1137 (1191)
+..++.|.+
T Consensus 930 ~~~~~~~~~ 938 (941)
T TIGR01517 930 IFGVLLRLI 938 (941)
T ss_pred HHHHHHHhc
Confidence 888888775
No 12
>TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116.
Probab=100.00 E-value=6.5e-102 Score=987.45 Aligned_cols=826 Identities=19% Similarity=0.203 Sum_probs=642.2
Q ss_pred CccccccCCCCceeecCCCcchhhhHHHHHHHH-HHHHHHHHHHHHHHhcccCCcCCCchhhHHHHHHHHHHHHHHHHHH
Q 001008 47 NPEVVQLNYRGNYVSTTKYTAANFIPKSLFEQF-RRVANIYFLVVAFVSFSPLAPYSAPSVLAPLIVVIGATMAKEGVED 125 (1191)
Q Consensus 47 ~~~~~~~~~g~N~i~~~k~~~~~flp~~l~~qf-~~~~n~~fl~~~il~~~~~~~~~~~~~~~~l~~vl~~~~i~~~~~d 125 (1191)
+.++|+++||+|+++.++.+.+. +.+++|| .+|++++++++++++++. +.|...+.+++++++.++..++++
T Consensus 29 ev~~r~~~~G~N~i~~~~~~s~~---~~~l~~~~~~~~~~~L~~aa~ls~~~----g~~~~~~~i~~~i~~~~~i~~~qe 101 (884)
T TIGR01522 29 EASHRRAFHGWNEFDVEEDESLW---KKFLSQFVKNPLILLLIASAVISVFM----GNIDDAVSITLAILIVVTVGFVQE 101 (884)
T ss_pred HHHHHHHhcCCCcCCCCCCCCHH---HHHHHHHhhChHHHHHHHHHHHHHHH----cchhhHHHHHhHHHHHHHHHHHHH
Confidence 34678899999999988765443 8899999 999999999999999873 344445555666677778888999
Q ss_pred HHHhhhHHHHh---cceEEEEecCCeEEEEeccccccccEEEEeCCCcccceEEEEeeeCCCceEEEEeccCCcccccEe
Q 001008 126 WRRRKQDIEAN---NRKVKVYGQDHTFVETKWKNLRVGDLVKVHKDEYFPADLLLLSSIYEDGICYVETMNLDGETNLKL 202 (1191)
Q Consensus 126 ~~r~k~~~~~n---~~~~~V~r~~g~~~~i~~~~L~vGDIV~l~~ge~iPaD~~lL~ss~~~g~~~Vd~s~LtGEs~~~~ 202 (1191)
++..++.++++ +.+++|+| ||++++|+++||+|||||.|++||.|||||+|+++++ +.||||+|||||.|+.
T Consensus 102 ~~a~~~l~~L~~l~~~~~~ViR-dg~~~~I~~~eLv~GDiv~l~~Gd~IPaDg~ii~g~~----l~VDES~LTGES~pv~ 176 (884)
T TIGR01522 102 YRSEKSLEALNKLVPPECHLIR-EGKLEHVLASTLVPGDLVCLSVGDRVPADLRIVEAVD----LSIDESNLTGETTPVS 176 (884)
T ss_pred HHHHHHHHHHhccCCCeeEEEE-CCEEEEEEHHHCccCCEEEecCCCEEeeeEEEEEcCc----eEEEcccccCCCccee
Confidence 98888876664 67899999 9999999999999999999999999999999999654 8999999999999999
Q ss_pred ecchhhhcccCChhhhcccceEEEeecCCCCceeeEEEEEEcCeeeccCCCceeecCcEeecCCeEEEEEEEecchhhHh
Q 001008 203 KRSLEATNHLRDEESFQKFTAVIKCEDPNERLYSFVGTLQYEGKQYPLSPQQILLRDSKLKNTDYVYGVVVFTGHDTKVM 282 (1191)
Q Consensus 203 K~~~~~~~~~~~~~~~~~~~~~i~~e~pn~~~~~f~Gt~~~~g~~~~l~~~n~l~rgs~l~nt~~~~gvVv~tG~~Tki~ 282 (1191)
|.+++..... ..+..+.+...|+||.+.+|. +.++|++||.+|.+.
T Consensus 177 K~~~~~~~~~-------------~~~~~~~~n~v~~GT~v~~G~---------------------~~~~V~~tG~~T~~g 222 (884)
T TIGR01522 177 KVTAPIPAAT-------------NGDLAERSNIAFMGTLVRCGH---------------------GKGIVVGTGSNTEFG 222 (884)
T ss_pred cccccccccc-------------cccccccCceEEeCCEEEeee---------------------EEEEEEEecCccHHH
Confidence 9986532100 011122333668888888777 999999999999653
Q ss_pred ---hccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcccccCCCccccccccCCCCCcccCCCCchhHHHH
Q 001008 283 ---QNATDPPSKRSKIERKMDKIVYLLFSTLILISSTGSVFFGIETKRDIDGGKIRRWYLQPDDATVFYDPRRAPLAAFL 359 (1191)
Q Consensus 283 ---~~~~~~~~k~s~l~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 359 (1191)
.....+...++|+++.++++..++.++.++++++.+++.. +.+. . +..
T Consensus 223 ki~~~v~~~~~~kt~lq~~l~~l~~~~~~~~~~~~~~~~~~~~-~~~~--------~--------------------~~~ 273 (884)
T TIGR01522 223 AVFKMMQAIEKPKTPLQKSMDLLGKQLSLVSFGVIGVICLVGW-FQGK--------D--------------------WLE 273 (884)
T ss_pred HHHHHhccCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhcC--------C--------------------HHH
Confidence 4445556668999999999999887766555444433321 1110 1 233
Q ss_pred HHHHHHHHhhccccchhhhHHHHHHHHHHHHHhhcccccccCCCCCccccCccccccccceeEEEecCCCccccceeEEE
Q 001008 360 HFLTGLMLYGYLIPISLYISIEIVKVLQSVFINHDRDMYYEDTDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFV 439 (1191)
Q Consensus 360 ~~~~~i~ll~~~iP~sL~v~~~~~~~~~~~~i~~d~~m~~~~~~~~~~v~~~~~~e~Lg~v~~i~~DKTGTLT~n~m~~~ 439 (1191)
.+..++.+++.+||++||++++++...+..++ +++++++|+++++|+||++++||||||||||+|+|++.
T Consensus 274 ~~~~~v~llv~aiP~~Lp~~vt~~l~~~~~r~----------ak~~ilvk~~~a~E~Lg~v~~Ic~DKTGTLT~n~m~v~ 343 (884)
T TIGR01522 274 MFTISVSLAVAAIPEGLPIIVTVTLALGVLRM----------SKKRAIVRKLPSVETLGSVNVICSDKTGTLTKNHMTVT 343 (884)
T ss_pred HHHHHHHHHHHHccchHHHHHHHHHHHHHHHH----------hhcCCcccchHHHHhccCccEEEecCccccccCeEEEE
Confidence 67788899999999999999999999998877 88999999999999999999999999999999999999
Q ss_pred EEEEcCeeecc-chhHHHHHHHHhhCCcccccCCCCCCCCCCCCccccCCCccCCcccCChhhhcccCCCCCChHHHHHH
Q 001008 440 KCSVAGVAYGR-VMTEVERTLAKRKGERTFEVDDSQTDAPGLNGNIVESGKSVKGFNFRDERIMNGQWVNEPHSDVIQKF 518 (1191)
Q Consensus 440 ~~~i~~~~y~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 518 (1191)
+++..+..+.. +... .+ + .+....+++ ......+....++
T Consensus 344 ~i~~~~~~~~~~~~~~------------~~---------~------------~~~~~~~~~------~~~~~~~~~~~~~ 384 (884)
T TIGR01522 344 KIWTSDGLHTMLNAVS------------LN---------Q------------FGEVIVDGD------VLHGFYTVAVSRI 384 (884)
T ss_pred EEEecCceEeeccCCc------------cC---------C------------CCccccccc------ccccccCHHHHHH
Confidence 99876543210 0000 00 0 000000000 0001122356678
Q ss_pred HHHHhhhccceeccCCCCCceEEecCCccHHHHHHHHHHcCcEEEeecCCeeEEEecCCCCccccceEEEEeEeecccCC
Q 001008 519 FRVLAICHTAIPDVNEETGEISYEAESPDEAAFVIAAREVGFQFFGSSQTSISLHELDPVSGQKVNRVYELLHVLEFTSS 598 (1191)
Q Consensus 519 ~~~lalC~~~~~~~~~~~~~~~y~~~sp~e~Alv~~a~~~g~~~~~~~~~~~~i~~~~~~~~~~~~~~~~il~~~~F~s~ 598 (1191)
+.+.++||++..+..+ +. ..+||+|.||+++++..|+... ...++.++.+||+|+
T Consensus 385 l~~~~l~~~~~~~~~~--~~---~~g~p~e~All~~~~~~~~~~~--------------------~~~~~~~~~~pF~s~ 439 (884)
T TIGR01522 385 LEAGNLCNNAKFRNEA--DT---LLGNPTDVALIELLMKFGLDDL--------------------RETYIRVAEVPFSSE 439 (884)
T ss_pred HHHHhhhCCCeecCCC--CC---cCCChHHHHHHHHHHHcCcHhH--------------------HhhCcEEeEeCCCCC
Confidence 8899999998654321 11 1369999999999998876311 345778899999999
Q ss_pred CceEEEEEEcC-CCcEEEEEeccchHHHHHHhhc----------ChhhHHHHHHHHHHHHhccceEEEEEEEecCHHHHH
Q 001008 599 RKRMSVMVRNP-ENQLLLLCKGADSVMFERLSKH----------GQQFEAETRRHINRYAEAGLRTLVIAYRELGEDEYR 667 (1191)
Q Consensus 599 rkrmsviv~~~-~~~~~l~~KGa~~~i~~~~~~~----------~~~~~~~~~~~l~~~a~~GlR~L~~A~r~l~~~~~~ 667 (1191)
||||+++++.+ ++++++++|||||.|+++|+.. +++.++++.+.+++++.+|+|++++|||++
T Consensus 440 ~k~m~v~~~~~~~~~~~~~~KGape~il~~c~~~~~~~g~~~~l~~~~~~~i~~~~~~~a~~G~rvl~~A~~~~------ 513 (884)
T TIGR01522 440 RKWMAVKCVHRQDRSEMCFMKGAYEQVLKYCTYYQKKDGKTLTLTQQQRDVIQEEAAEMASAGLRVIAFASGPE------ 513 (884)
T ss_pred CCeEEEEEEEcCCCeEEEEEeCChHHHHHhhhhhhhcCCCeeeCCHHHHHHHHHHHHHHHhcCCEEEEEEEEcC------
Confidence 99999999864 5678999999999999999742 123456778888999999999999999865
Q ss_pred HHHHHHHHHhhcchhhHHHHHHHHHHHhhccceEEEeeeecccccCCcHHHHHHHHHcCCeEEEEeCCCHhhHHHHHHHc
Q 001008 668 IWEKEFLKAKTSVTSDREALVASAAEKIERDLILLGATAVEDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYAC 747 (1191)
Q Consensus 668 ~~~~~~~~a~~~l~~~r~~~~~~~~~~iE~dl~llG~~~ieD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~ 747 (1191)
+.+|+|+|+++++||+|+|++++|+.|+++||+++|+|||+.+||.++|+++
T Consensus 514 ----------------------------~~~l~~lGli~l~Dp~r~~~~~~i~~l~~~Gi~v~miTGD~~~tA~~ia~~~ 565 (884)
T TIGR01522 514 ----------------------------KGQLTFLGLVGINDPPRPGVKEAVTTLITGGVRIIMITGDSQETAVSIARRL 565 (884)
T ss_pred ----------------------------CCCeEEEEEEeccCcchhHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHc
Confidence 2589999999999999999999999999999999999999999999999999
Q ss_pred CccccCceEEEEecCCchhhhhhhhcchHHHHHHHHHHHHHHHHhhcccccccccccceeEEEEeCchhhHHhHHHHHHH
Q 001008 748 SLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKM 827 (1191)
Q Consensus 748 gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~ 827 (1191)
|+...... +++|++++..-++++.+.
T Consensus 566 Gi~~~~~~------------------------------------------------------~v~g~~l~~~~~~~l~~~ 591 (884)
T TIGR01522 566 GMPSKTSQ------------------------------------------------------SVSGEKLDAMDDQQLSQI 591 (884)
T ss_pred CCCCCCCc------------------------------------------------------eeEhHHhHhCCHHHHHHH
Confidence 99754321 356666655444444443
Q ss_pred HHHHHhhcCceEEEcCChhhHHHHHHHhhcCCCEEEEEcCCccChHhhhhcceeEEec--cCccchhhhccceeccc--h
Q 001008 828 FLDLAIDCASVICCRSSPKQKALVTRLVKGTGKTTLAIGDGANDVGMLQEADIGVGIS--GVEGMQAVMSSDYAIAQ--F 903 (1191)
Q Consensus 828 ~~~l~~~~~~~v~~r~sP~qK~~iV~~l~~~g~~vl~iGDG~ND~~ml~~AdvGI~i~--g~e~~~a~~~aD~vl~~--f 903 (1191)
+. +..||||++|+||..+|+.+|..|+.|+|+|||.||+|||++|||||++. |++. |+++||+++++ |
T Consensus 592 ~~------~~~Vfar~~P~~K~~iv~~lq~~g~~v~mvGDGvND~pAl~~AdVGia~g~~g~~v--a~~aaDivl~dd~~ 663 (884)
T TIGR01522 592 VP------KVAVFARASPEHKMKIVKALQKRGDVVAMTGDGVNDAPALKLADIGVAMGQTGTDV--AKEAADMILTDDDF 663 (884)
T ss_pred hh------cCeEEEECCHHHHHHHHHHHHHCCCEEEEECCCcccHHHHHhCCeeEecCCCcCHH--HHHhcCEEEcCCCH
Confidence 32 34699999999999999999999999999999999999999999999993 3444 67899999987 6
Q ss_pred hhhhHhhhhhchhhhhHhhHhHHHHHHhHHHHHHHHHHHHhhhccccccchhHHHHHHHHHHhhhhhHHhhhcccccCCh
Q 001008 904 RFLERLLLVHGHWCYRRISMMICYFFYKNLTFGFTLFWYEAYASFSGRPAYNDWYMSCYNVFFTSLPVIALGVFDQDVSA 983 (1191)
Q Consensus 904 ~~l~~lll~~GR~~~~~i~~~i~~~~~~n~~~~~~~~~~~~~~~~s~~~~~~~~~~l~~n~~~~~~p~~~l~~~~~d~~~ 983 (1191)
..+..+ +.+||.+|+|+++++.|.++.|+..+++.+++.++. ...+++++|++|+|++++.+|+++++.++ +++
T Consensus 664 ~~i~~~-i~~gR~~~~ni~k~i~~~l~~ni~~~~~~~~~~~~~---~~~pl~~~qiL~inl~~d~~~a~~l~~e~--~~~ 737 (884)
T TIGR01522 664 ATILSA-IEEGKGIFNNIKNFITFQLSTSVAALSLIALATLMG---FPNPLNAMQILWINILMDGPPAQSLGVEP--VDK 737 (884)
T ss_pred HHHHHH-HHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHc---CCCchhHHHHHHHHHHHHhhHHHHhccCC--CCh
Confidence 668888 899999999999999999999999888877666553 34679999999999999999999998743 455
Q ss_pred hhhhcCccchhccccCCccchhhHHHhhHhHHHHHHHHHHHHHhhhccccccCCCcceehhhhhhHHhhHHHHHHHHHHH
Q 001008 984 RLCLKYPLLYQEGVQNILFSWPRILGWMSNGVLSAIIIFFFTTNSIFNQAFRKDGHAVDYEVLGVAMYSSVVWAVNCQMA 1063 (1191)
Q Consensus 984 ~~~~~~P~ly~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~f~~~v~~~~~~~~ 1063 (1191)
+.+.++|+ .++.+++++.++..|++.|++++++.++++++.+.. +. ......|++|+++++.+.+..+
T Consensus 738 ~~m~~~P~----~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~------~~--~~~~~~t~~f~~~v~~q~~~~~ 805 (884)
T TIGR01522 738 DVMRKPPR----PRNDKILTKDLIKKILVSAIIIVVGTLFVFVREMQD------GV--ITARDTTMTFTCFVFFDMFNAL 805 (884)
T ss_pred hHhhCCCC----CCCCCccCHHHHHHHHHHHHHHHHHHHHHHHHHHcC------Cc--chhhHHHHHHHHHHHHHHHHHH
Confidence 55555565 578899999999999999999888776665443221 11 1123457788877776655554
Q ss_pred hhhc-c---c--hhhHHHHHHHHHHHHHHHHHHHhcCCCCCcchhHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHHH
Q 001008 1064 LSIN-Y---F--TWIQHFFIWGSIALWYIFLVVYGSLPPTFSTTAYKVLVEACAPSILYWLTTLLVVVSTLLPYFLYRAF 1137 (1191)
Q Consensus 1064 l~~~-~---~--~~~~~~~i~~si~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~s~~~wl~~l~~~~~~ll~~~i~k~~ 1137 (1191)
.... . | .++.|.++|+++++.++++++..++|. ++. +|...++++..|+.+++++++.++..++.|++
T Consensus 806 ~~r~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~p~-~~~-----~f~~~~l~~~~w~~~~~~~~~~~~~~~~~k~~ 879 (884)
T TIGR01522 806 ACRSQTKSVFEIGFFSNRMFNYAVGGSIIGQLLVIYFPP-LQS-----VFQTEALSIKDLLFLLLITSSVCIVDEIRKKV 879 (884)
T ss_pred HHccCCccccccCcccCHHHHHHHHHHHHHHHHHHHHHH-HHH-----HHcCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3211 1 1 235678899999999999988888874 233 67788899999999999999999999999998
Q ss_pred HHhc
Q 001008 1138 QTRF 1141 (1191)
Q Consensus 1138 ~~~~ 1141 (1191)
+|++
T Consensus 880 ~~~~ 883 (884)
T TIGR01522 880 ERSR 883 (884)
T ss_pred Hhhc
Confidence 8764
No 13
>TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V). These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in.
Probab=100.00 E-value=3.6e-99 Score=976.35 Aligned_cols=848 Identities=17% Similarity=0.191 Sum_probs=603.3
Q ss_pred cccccCCCCceeecCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHhcccCCcCCCchhhHHHHHHHHHHHHHHHHHHHHH
Q 001008 49 EVVQLNYRGNYVSTTKYTAANFIPKSLFEQFRRVANIYFLVVAFVSFSPLAPYSAPSVLAPLIVVIGATMAKEGVEDWRR 128 (1191)
Q Consensus 49 ~~~~~~~g~N~i~~~k~~~~~flp~~l~~qf~~~~n~~fl~~~il~~~~~~~~~~~~~~~~l~~vl~~~~i~~~~~d~~r 128 (1191)
+.++++||.|.+..++.+++ +.+++||..|+++++++++++++.. ++|.+.+.++++++++.+...++.++.
T Consensus 146 ~~r~~~yG~N~i~~~~~s~~----~ll~~~~~~p~~i~~i~~~~l~~~~----~~~~~~~~i~~i~~~~~~~~~~~~~k~ 217 (1054)
T TIGR01657 146 AQRKAKYGKNEIEIPVPSFL----ELLKEEVLHPFYVFQVFSVILWLLD----EYYYYSLCIVFMSSTSISLSVYQIRKQ 217 (1054)
T ss_pred HHHHHhcCCCeeecCCCCHH----HHHHHHHhchHHHHHHHHHHHHHhh----hhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45788999999999886655 8899999999999888887777652 455666666777777888888888887
Q ss_pred hhhHHHHh--cceEEEEecCCeEEEEeccccccccEEEEe--CCCcccceEEEEeeeCCCceEEEEeccCCcccccEeec
Q 001008 129 RKQDIEAN--NRKVKVYGQDHTFVETKWKNLRVGDLVKVH--KDEYFPADLLLLSSIYEDGICYVETMNLDGETNLKLKR 204 (1191)
Q Consensus 129 ~k~~~~~n--~~~~~V~r~~g~~~~i~~~~L~vGDIV~l~--~ge~iPaD~~lL~ss~~~g~~~Vd~s~LtGEs~~~~K~ 204 (1191)
.++.+++. +..++|+| ||++++|+++||+|||||.|+ +|+.|||||+|++ |.|.||||+|||||.|+.|.
T Consensus 218 ~~~L~~~~~~~~~v~V~R-dg~~~~I~s~eLvpGDiv~l~~~~g~~iPaD~~ll~-----g~~~VdES~LTGES~Pv~K~ 291 (1054)
T TIGR01657 218 MQRLRDMVHKPQSVIVIR-NGKWVTIASDELVPGDIVSIPRPEEKTMPCDSVLLS-----GSCIVNESMLTGESVPVLKF 291 (1054)
T ss_pred HHHHHHhhcCCeeEEEEE-CCEEEEEEcccCCCCCEEEEecCCCCEecceEEEEe-----CcEEEecccccCCccceecc
Confidence 77777764 56899999 999999999999999999999 9999999999998 55999999999999999998
Q ss_pred chhhhcccCChhhhcccceEEEeecCCCCceeeEEEEEEcCeeeccCCCceeecCcEeecCCeEEEEEEEecchh---hH
Q 001008 205 SLEATNHLRDEESFQKFTAVIKCEDPNERLYSFVGTLQYEGKQYPLSPQQILLRDSKLKNTDYVYGVVVFTGHDT---KV 281 (1191)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~i~~e~pn~~~~~f~Gt~~~~g~~~~l~~~n~l~rgs~l~nt~~~~gvVv~tG~~T---ki 281 (1191)
+.+.... . .+ .+.+...+++...|+||.+++.... ..++.+.|+|++||.+| ++
T Consensus 292 ~~~~~~~-~-~~-------~~~~~~~~~~~~lf~GT~v~~~~~~--------------~g~g~~~~vV~~TG~~T~~G~i 348 (1054)
T TIGR01657 292 PIPDNGD-D-DE-------DLFLYETSKKHVLFGGTKILQIRPY--------------PGDTGCLAIVVRTGFSTSKGQL 348 (1054)
T ss_pred cCCcccc-c-cc-------cccccccccceEEEcCCEEEEEecC--------------CCCCcEEEEEEeCCccccchHH
Confidence 8643100 0 00 0000111222344555555431100 01356999999999999 55
Q ss_pred hhccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcccccCCCccccccccCCCCCcccCCCCchhHHHHHH
Q 001008 282 MQNATDPPSKRSKIERKMDKIVYLLFSTLILISSTGSVFFGIETKRDIDGGKIRRWYLQPDDATVFYDPRRAPLAAFLHF 361 (1191)
Q Consensus 282 ~~~~~~~~~k~s~l~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 361 (1191)
.+....++.+.+++++.+.+++..++.+.++.+++.++ .+...+ ..+...+
T Consensus 349 ~~~i~~~~~~~~~~~~~~~~~~~~l~~~a~i~~i~~~~-~~~~~~----------------------------~~~~~~~ 399 (1054)
T TIGR01657 349 VRSILYPKPRVFKFYKDSFKFILFLAVLALIGFIYTII-ELIKDG----------------------------RPLGKII 399 (1054)
T ss_pred HHHhhCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHH-HHHHcC----------------------------CcHHHHH
Confidence 55555666677899999988877665544433322221 111111 0123478
Q ss_pred HHHHHHhhccccchhhhHHHHHHHHHHHHHhhcccccccCCCCCccccCccccccccceeEEEecCCCccccceeEEEEE
Q 001008 362 LTGLMLYGYLIPISLYISIEIVKVLQSVFINHDRDMYYEDTDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFVKC 441 (1191)
Q Consensus 362 ~~~i~ll~~~iP~sL~v~~~~~~~~~~~~i~~d~~m~~~~~~~~~~v~~~~~~e~Lg~v~~i~~DKTGTLT~n~m~~~~~ 441 (1191)
++++.+++.++|++||++++++...+..++ ++++++|++++.+|.||+++++|||||||||+|+|+|.++
T Consensus 400 l~~l~iiv~~vP~~LP~~~ti~l~~~~~rL----------~k~~il~~~~~~ie~lG~v~vicfDKTGTLTen~m~v~~v 469 (1054)
T TIGR01657 400 LRSLDIITIVVPPALPAELSIGINNSLARL----------KKKGIFCTSPFRINFAGKIDVCCFDKTGTLTEDGLDLRGV 469 (1054)
T ss_pred HHHHHHHHhhcCchHHHHHHHHHHHHHHHH----------HHCCEEEcCcccceecceeeEEEEcCCCCCccCCeeEEeE
Confidence 889999999999999999999999999988 7889999999999999999999999999999999999998
Q ss_pred EEcCeeeccchhHHHHHHHHhhCCcccccCCCCCCCCCCCCccccCCCccCCcccCChhhhcccCCCCCChHHHHHHHHH
Q 001008 442 SVAGVAYGRVMTEVERTLAKRKGERTFEVDDSQTDAPGLNGNIVESGKSVKGFNFRDERIMNGQWVNEPHSDVIQKFFRV 521 (1191)
Q Consensus 442 ~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 521 (1191)
+..+...... ... ..........+..+
T Consensus 470 ~~~~~~~~~~-----------------------------------------------~~~------~~~~~~~~~~~~~~ 496 (1054)
T TIGR01657 470 QGLSGNQEFL-----------------------------------------------KIV------TEDSSLKPSITHKA 496 (1054)
T ss_pred ecccCccccc-----------------------------------------------ccc------ccccccCchHHHHH
Confidence 7543210000 000 00000122346778
Q ss_pred HhhhccceeccCCCCCceEEecCCccHHHHHHHHHHcCcEEEe-ecCC---e--eEEEecCCCCccccceEEEEeEeecc
Q 001008 522 LAICHTAIPDVNEETGEISYEAESPDEAAFVIAAREVGFQFFG-SSQT---S--ISLHELDPVSGQKVNRVYELLHVLEF 595 (1191)
Q Consensus 522 lalC~~~~~~~~~~~~~~~y~~~sp~e~Alv~~a~~~g~~~~~-~~~~---~--~~i~~~~~~~~~~~~~~~~il~~~~F 595 (1191)
+++||++....+ ...+||.|.|+++++ |+.+.. .... . ..+..... ...+++++.+||
T Consensus 497 ~a~C~~~~~~~~-------~~~Gdp~E~al~~~~---~~~~~~~~~~~~~~~~~~~i~~~~~------~~~~~il~~~pF 560 (1054)
T TIGR01657 497 LATCHSLTKLEG-------KLVGDPLDKKMFEAT---GWTLEEDDESAEPTSILAVVRTDDP------PQELSIIRRFQF 560 (1054)
T ss_pred HHhCCeeEEECC-------EEecCHHHHHHHHhC---CCEEECCCCcccccccccceeccCC------CceEEEEEEEee
Confidence 999999865422 135899999999975 555433 1100 0 00111111 357999999999
Q ss_pred cCCCceEEEEEEcCC-CcEEEEEeccchHHHHHHhhcChhhHHHHHHHHHHHHhccceEEEEEEEecCHHHHHHHHHHHH
Q 001008 596 TSSRKRMSVMVRNPE-NQLLLLCKGADSVMFERLSKHGQQFEAETRRHINRYAEAGLRTLVIAYRELGEDEYRIWEKEFL 674 (1191)
Q Consensus 596 ~s~rkrmsviv~~~~-~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~l~~~a~~GlR~L~~A~r~l~~~~~~~~~~~~~ 674 (1191)
+|+||||||+++.++ +++++|+|||||.|+++|++. ..++++.+.+++|+.+|+|||++|||++++.++.++.+
T Consensus 561 ~S~~krMsvvv~~~~~~~~~~~~KGApE~Il~~c~~~--~~p~~~~~~~~~~a~~G~RVLalA~k~l~~~~~~~~~~--- 635 (1054)
T TIGR01657 561 SSALQRMSVIVSTNDERSPDAFVKGAPETIQSLCSPE--TVPSDYQEVLKSYTREGYRVLALAYKELPKLTLQKAQD--- 635 (1054)
T ss_pred cCCCCEEEEEEEEcCCCeEEEEEECCHHHHHHHcCCc--CCChhHHHHHHHHHhcCCEEEEEEEeecCccchhhhhh---
Confidence 999999999999754 568899999999999999864 35678889999999999999999999997543222211
Q ss_pred HHhhcchhhHHHHHHHHHHHhhccceEEEeeeecccccCCcHHHHHHHHHcCCeEEEEeCCCHhhHHHHHHHcCccccCc
Q 001008 675 KAKTSVTSDREALVASAAEKIERDLILLGATAVEDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEM 754 (1191)
Q Consensus 675 ~a~~~l~~~r~~~~~~~~~~iE~dl~llG~~~ieD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~ 754 (1191)
.+ .+.+|+||+|+|+++++||+|++++++|+.|++|||++||+|||+..||.+||++|||++++.
T Consensus 636 -------~~--------r~~~E~~L~flGli~~~d~lr~~~~~~I~~l~~agi~v~miTGD~~~TA~~iA~~~gii~~~~ 700 (1054)
T TIGR01657 636 -------LS--------RDAVESNLTFLGFIVFENPLKPDTKEVIKELKRASIRTVMITGDNPLTAVHVARECGIVNPSN 700 (1054)
T ss_pred -------cc--------HHHHhcCceEEEEEEEecCCCccHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCc
Confidence 12 256899999999999999999999999999999999999999999999999999999998776
Q ss_pred eEEEEecCCchh-----hhhhhhcchHHHHHHHHHHHHHHHHhhcccccccccccceeEEEEeCchhhHHhHHHHHHHHH
Q 001008 755 KQIVITLDSPDM-----EALEKQGDKENITKVSLESVTKQIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFL 829 (1191)
Q Consensus 755 ~~~~i~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~ 829 (1191)
.++..+....+. ..+........... .. ..+...............+.++++|++++.+.+. ..+.+.
T Consensus 701 ~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~--~~~~~~~~~~~~~~~~~~~~~~itG~~l~~l~~~-~~~~l~ 773 (1054)
T TIGR01657 701 TLILAEAEPPESGKPNQIKFEVIDSIPFAST----QV--EIPYPLGQDSVEDLLASRYHLAMSGKAFAVLQAH-SPELLL 773 (1054)
T ss_pred eEEEeecccccCCCCceEEEEecCccccccc----cc--cccCcccccchhhhcccceEEEEEcHHHHHHHHh-hHHHHH
Confidence 555543321100 00000000000000 00 0000000000001112446789999999876432 223455
Q ss_pred HHHhhcCceEEEcCChhhHHHHHHHhhcCCCEEEEEcCCccChHhhhhcceeEEeccCccchhhhccceeccc--hhhhh
Q 001008 830 DLAIDCASVICCRSSPKQKALVTRLVKGTGKTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAIAQ--FRFLE 907 (1191)
Q Consensus 830 ~l~~~~~~~v~~r~sP~qK~~iV~~l~~~g~~vl~iGDG~ND~~ml~~AdvGI~i~g~e~~~a~~~aD~vl~~--f~~l~ 907 (1191)
++..+++ ||||++|+||.++|+.+|+.|++|+|||||+||+||||+|||||||++.| |+.+|||++.+ |+.+.
T Consensus 774 ~~~~~~~--VfAR~sP~qK~~iV~~lq~~g~~V~m~GDG~ND~~ALK~AdVGIam~~~d---as~AA~f~l~~~~~~~I~ 848 (1054)
T TIGR01657 774 RLLSHTT--VFARMAPDQKETLVELLQKLDYTVGMCGDGANDCGALKQADVGISLSEAE---ASVAAPFTSKLASISCVP 848 (1054)
T ss_pred HHHhcCe--EEEecCHHHHHHHHHHHHhCCCeEEEEeCChHHHHHHHhcCcceeecccc---ceeecccccCCCcHHHHH
Confidence 5555554 99999999999999999999999999999999999999999999997765 56899999986 66688
Q ss_pred HhhhhhchhhhhHhhHhHHHHHHhHHHHHHHHHHHHhhhccccccchhHHHHHHHHHHhhhhhHHhhhcccccCChhhhh
Q 001008 908 RLLLVHGHWCYRRISMMICYFFYKNLTFGFTLFWYEAYASFSGRPAYNDWYMSCYNVFFTSLPVIALGVFDQDVSARLCL 987 (1191)
Q Consensus 908 ~lll~~GR~~~~~i~~~i~~~~~~n~~~~~~~~~~~~~~~~s~~~~~~~~~~l~~n~~~~~~p~~~l~~~~~d~~~~~~~ 987 (1191)
++ +.+||+++.++.+++.|.+..++...+..++..+. + .++.++|++|+|++++.+|+++++..+ +.+.++
T Consensus 849 ~~-I~eGR~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~----~-~~l~~~Q~l~i~li~~~~~~l~l~~~~---p~~~l~ 919 (1054)
T TIGR01657 849 NV-IREGRCALVTSFQMFKYMALYSLIQFYSVSILYLI----G-SNLGDGQFLTIDLLLIFPVALLMSRNK---PLKKLS 919 (1054)
T ss_pred HH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc----c-CcCccHHHHHHHHHHHHHHHHHHHcCC---chhhcC
Confidence 88 89999999999999999988887775554433222 3 458899999999999999999998753 445555
Q ss_pred cCccchhccccCCccchhhHHHhhHhHHHHHHHHHHHHHhhhccccccC-CC----cceehhhhhhHHhhHHHHHHHHHH
Q 001008 988 KYPLLYQEGVQNILFSWPRILGWMSNGVLSAIIIFFFTTNSIFNQAFRK-DG----HAVDYEVLGVAMYSSVVWAVNCQM 1062 (1191)
Q Consensus 988 ~~P~ly~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~-~g----~~~~~~~~~~~~f~~~v~~~~~~~ 1062 (1191)
+.|+ ...++++.++..++.+++++.++.++.+++......+.. .. .........|++|....+ +++..
T Consensus 920 ~~~P------~~~l~~~~~~~si~~q~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~T~~f~~~~~-~~~~~ 992 (1054)
T TIGR01657 920 KERP------PSNLFSVYILTSVLIQFVLHILSQVYLVFELHAQPWYKPENPVDLEKENFPNLLNTVLFFVSSF-QYLIT 992 (1054)
T ss_pred CCCC------CccccCHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCccCCCCCCcccccCccHHHHHHHHHHHH-HHHHh
Confidence 5554 468999999999999999999988887766543221100 00 001112335666633322 22222
Q ss_pred Hhh-h----ccchhhHHHHHHHHHHHHHHHHH
Q 001008 1063 ALS-I----NYFTWIQHFFIWGSIALWYIFLV 1089 (1191)
Q Consensus 1063 ~l~-~----~~~~~~~~~~i~~si~~~~i~~~ 1089 (1191)
+.. . ....++.|..+++++++.+++++
T Consensus 993 ~~~~~~g~pf~~~~~~N~~~~~~~~~~~~~~~ 1024 (1054)
T TIGR01657 993 AIVNSKGPPFREPIYKNKPFVYLLITGLGLLL 1024 (1054)
T ss_pred eEEEcCCcchhhhHHHhHHHHHHHHHHHHHHH
Confidence 221 1 11245677777777776655554
No 14
>PRK15122 magnesium-transporting ATPase; Provisional
Probab=100.00 E-value=3.4e-99 Score=955.82 Aligned_cols=809 Identities=18% Similarity=0.185 Sum_probs=604.9
Q ss_pred CccccccCCCCceeecCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHhccc--CCc-----CCCchhhHHHHHHHHHHHH
Q 001008 47 NPEVVQLNYRGNYVSTTKYTAANFIPKSLFEQFRRVANIYFLVVAFVSFSP--LAP-----YSAPSVLAPLIVVIGATMA 119 (1191)
Q Consensus 47 ~~~~~~~~~g~N~i~~~k~~~~~flp~~l~~qf~~~~n~~fl~~~il~~~~--~~~-----~~~~~~~~~l~~vl~~~~i 119 (1191)
+.++|+++||+|+++.++.+.+. +.+++||.+|+.++++++++++++. +.+ ...|...+.++++++++.+
T Consensus 50 ea~~rl~~~G~N~l~~~~~~~~~---~~~l~~f~~~~~~iL~~aa~ls~~~~~~~~~~~~~~~~~~~~~iI~~~v~l~~~ 126 (903)
T PRK15122 50 DAAERLQRYGPNEVAHEKPPHAL---VQLLQAFNNPFIYVLMVLAAISFFTDYWLPLRRGEETDLTGVIIILTMVLLSGL 126 (903)
T ss_pred HHHHHHHhcCCCCCCCCCCCCHH---HHHHHHHHhHHHHHHHHHHHHHHHHHHHhhccCCccccHhHHHHHHHHHHHHHH
Confidence 34678999999999988866443 7899999999999999999999874 111 1234566667788888999
Q ss_pred HHHHHHHHHhhhHHHH---hcceEEEEecC------CeEEEEeccccccccEEEEeCCCcccceEEEEeeeCCCceEEEE
Q 001008 120 KEGVEDWRRRKQDIEA---NNRKVKVYGQD------HTFVETKWKNLRVGDLVKVHKDEYFPADLLLLSSIYEDGICYVE 190 (1191)
Q Consensus 120 ~~~~~d~~r~k~~~~~---n~~~~~V~r~~------g~~~~i~~~~L~vGDIV~l~~ge~iPaD~~lL~ss~~~g~~~Vd 190 (1191)
.+++++++..++.+.+ .+.+++|+| | |++++|++++|+|||||.|++||.|||||+|+++++ +.||
T Consensus 127 i~~~qe~~a~~a~~~L~~l~~~~~~V~R-dg~~~~~g~~~~I~~~eLv~GDiV~l~~Gd~IPaDg~li~g~~----l~VD 201 (903)
T PRK15122 127 LRFWQEFRSNKAAEALKAMVRTTATVLR-RGHAGAEPVRREIPMRELVPGDIVHLSAGDMIPADVRLIESRD----LFIS 201 (903)
T ss_pred HHHHHHHHHHHHHHHHHhccCCceEEEE-CCccCCCCeEEEEEHHHCCCCCEEEECCCCEEeeeEEEEEcCc----eEEE
Confidence 9999999988775554 468899999 7 589999999999999999999999999999999654 8999
Q ss_pred eccCCcccccEeecchhhh--c---ccCChhhhcccceEEEeecCCCCceeeEEEEEEcCeeeccCCCceeecCcEeecC
Q 001008 191 TMNLDGETNLKLKRSLEAT--N---HLRDEESFQKFTAVIKCEDPNERLYSFVGTLQYEGKQYPLSPQQILLRDSKLKNT 265 (1191)
Q Consensus 191 ~s~LtGEs~~~~K~~~~~~--~---~~~~~~~~~~~~~~i~~e~pn~~~~~f~Gt~~~~g~~~~l~~~n~l~rgs~l~nt 265 (1191)
||+|||||.|+.|.+.... . .....+. .+..+.....|+||.+.+|+
T Consensus 202 ES~LTGES~PV~K~~~~~~~~~~~~~~~~~~~---------~~~~~~~n~vfaGT~V~~G~------------------- 253 (903)
T PRK15122 202 QAVLTGEALPVEKYDTLGAVAGKSADALADDE---------GSLLDLPNICFMGTNVVSGT------------------- 253 (903)
T ss_pred ccccCCCCcceeeecccccccccccccccccc---------CCcccccceEEeCCEEEeee-------------------
Confidence 9999999999999863110 0 0000000 00001122457777777777
Q ss_pred CeEEEEEEEecchhhH---hhccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcccccCCCccccccccCC
Q 001008 266 DYVYGVVVFTGHDTKV---MQNATDPPSKRSKIERKMDKIVYLLFSTLILISSTGSVFFGIETKRDIDGGKIRRWYLQPD 342 (1191)
Q Consensus 266 ~~~~gvVv~tG~~Tki---~~~~~~~~~k~s~l~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~ 342 (1191)
+.++|++||.+|.+ ...... +..++++++.++++...+..+.++++.+..++..+.. . .
T Consensus 254 --~~~~V~atG~~T~~gkI~~~v~~-~~~~t~l~~~l~~i~~~l~~~~~~~~~~v~~~~~~~~-~--------~------ 315 (903)
T PRK15122 254 --ATAVVVATGSRTYFGSLAKSIVG-TRAQTAFDRGVNSVSWLLIRFMLVMVPVVLLINGFTK-G--------D------ 315 (903)
T ss_pred --EEEEEEEeccccHhhHHHHHhcC-CCCCCcHHHHHHHHHHHHHHHHHHHHHHhhhhhhhcc-C--------C------
Confidence 99999999999965 333333 4456899999999988877666655554433322111 0 1
Q ss_pred CCCcccCCCCchhHHHHHHHHHHHHhhccccchhhhHHHHHHHHHHHHHhhcccccccCCCCCccccCccccccccceeE
Q 001008 343 DATVFYDPRRAPLAAFLHFLTGLMLYGYLIPISLYISIEIVKVLQSVFINHDRDMYYEDTDKPARARTSNLNEELGQVDT 422 (1191)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~~~~i~ll~~~iP~sL~v~~~~~~~~~~~~i~~d~~m~~~~~~~~~~v~~~~~~e~Lg~v~~ 422 (1191)
+...+..++.+++.+||++||++++++...++.++ +++++++|+++.+|+||++|+
T Consensus 316 --------------~~~~l~~aisl~V~~~Pe~Lp~~vt~~La~g~~~m----------ak~~ilVk~l~avE~Lg~v~v 371 (903)
T PRK15122 316 --------------WLEALLFALAVAVGLTPEMLPMIVSSNLAKGAIAM----------ARRKVVVKRLNAIQNFGAMDV 371 (903)
T ss_pred --------------HHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHH----------HHcCCeecccchhhhhcCCcE
Confidence 23367788999999999999999999999888877 789999999999999999999
Q ss_pred EEecCCCccccceeEEEEEEEcCeeeccchhHHHHHHHHhhCCcccccCCCCCCCCCCCCccccCCCccCCcccCChhhh
Q 001008 423 ILSDKTGTLTCNSMEFVKCSVAGVAYGRVMTEVERTLAKRKGERTFEVDDSQTDAPGLNGNIVESGKSVKGFNFRDERIM 502 (1191)
Q Consensus 423 i~~DKTGTLT~n~m~~~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~ 502 (1191)
||||||||||+|+|++.+++..+..
T Consensus 372 Ic~DKTGTLT~~~m~V~~~~~~~~~------------------------------------------------------- 396 (903)
T PRK15122 372 LCTDKTGTLTQDRIILEHHLDVSGR------------------------------------------------------- 396 (903)
T ss_pred EEecCCcccccCeEEEEEEEcCCCC-------------------------------------------------------
Confidence 9999999999999999886521100
Q ss_pred cccCCCCCChHHHHHHHHHHhhhccceeccCCCCCceEEecCCccHHHHHHHHHHcCcEEEeecCCeeEEEecCCCCccc
Q 001008 503 NGQWVNEPHSDVIQKFFRVLAICHTAIPDVNEETGEISYEAESPDEAAFVIAAREVGFQFFGSSQTSISLHELDPVSGQK 582 (1191)
Q Consensus 503 ~~~~~~~~~~~~~~~~~~~lalC~~~~~~~~~~~~~~~y~~~sp~e~Alv~~a~~~g~~~~~~~~~~~~i~~~~~~~~~~ 582 (1191)
.. .+++...++|... . . ..+||.|.|+++++.+.|....
T Consensus 397 --------~~---~~~l~~a~l~s~~-~---~-------~~~~p~e~All~~a~~~~~~~~------------------- 435 (903)
T PRK15122 397 --------KD---ERVLQLAWLNSFH-Q---S-------GMKNLMDQAVVAFAEGNPEIVK------------------- 435 (903)
T ss_pred --------Ch---HHHHHHHHHhCCC-C---C-------CCCChHHHHHHHHHHHcCchhh-------------------
Confidence 00 1233333333111 0 0 1479999999999988664210
Q ss_pred cceEEEEeEeecccCCCceEEEEEEcCCCcEEEEEeccchHHHHHHhhc---------ChhhHHHHHHHHHHHHhccceE
Q 001008 583 VNRVYELLHVLEFTSSRKRMSVMVRNPENQLLLLCKGADSVMFERLSKH---------GQQFEAETRRHINRYAEAGLRT 653 (1191)
Q Consensus 583 ~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~---------~~~~~~~~~~~l~~~a~~GlR~ 653 (1191)
...|+.+..+||+|.||||++++++.+|++++++||||+.|+++|+.. +++.++++.+.+++++.+|+|+
T Consensus 436 -~~~~~~~~~~pF~s~~k~ms~v~~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~l~~~~~~~i~~~~~~~a~~G~rv 514 (903)
T PRK15122 436 -PAGYRKVDELPFDFVRRRLSVVVEDAQGQHLLICKGAVEEMLAVATHVRDGDTVRPLDEARRERLLALAEAYNADGFRV 514 (903)
T ss_pred -hhcCceEEEeeeCCCcCEEEEEEEcCCCcEEEEECCcHHHHHHhchhhhcCCCeecCCHHHHHHHHHHHHHHHhCCCEE
Confidence 335677888999999999999999877889999999999999999742 2234566778889999999999
Q ss_pred EEEEEEecCHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHHhhccceEEEeeeecccccCCcHHHHHHHHHcCCeEEEEe
Q 001008 654 LVIAYRELGEDEYRIWEKEFLKAKTSVTSDREALVASAAEKIERDLILLGATAVEDKLQKGVPECIDKLAQAGIKVWVLT 733 (1191)
Q Consensus 654 L~~A~r~l~~~~~~~~~~~~~~a~~~l~~~r~~~~~~~~~~iE~dl~llG~~~ieD~lr~~v~~~I~~L~~aGIkv~mlT 733 (1191)
+++|||+++.++..++ ..+..|+|++|+|+++++||+|++++++|+.|+++||+++|+|
T Consensus 515 lavA~k~~~~~~~~~~---------------------~~~~~e~~l~~lGli~l~Dp~R~~a~~aI~~l~~aGI~v~miT 573 (903)
T PRK15122 515 LLVATREIPGGESRAQ---------------------YSTADERDLVIRGFLTFLDPPKESAAPAIAALRENGVAVKVLT 573 (903)
T ss_pred EEEEEeccCccccccc---------------------cccccccCcEEEEEEeccCccHHHHHHHHHHHHHCCCeEEEEC
Confidence 9999999866432110 0123478999999999999999999999999999999999999
Q ss_pred CCCHhhHHHHHHHcCccccCceEEEEecCCchhhhhhhhcchHHHHHHHHHHHHHHHHhhcccccccccccceeEEEEeC
Q 001008 734 GDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQIREGISQVNSAKESKVTFGLVIDG 813 (1191)
Q Consensus 734 GD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G 813 (1191)
||+..||.+||+++||..+. +++|
T Consensus 574 GD~~~tA~aIA~~lGI~~~~--------------------------------------------------------vi~G 597 (903)
T PRK15122 574 GDNPIVTAKICREVGLEPGE--------------------------------------------------------PLLG 597 (903)
T ss_pred CCCHHHHHHHHHHcCCCCCC--------------------------------------------------------ccch
Confidence 99999999999999994210 4667
Q ss_pred chhhHHhHHHHHHHHHHHHhhcCceEEEcCChhhHHHHHHHhhcCCCEEEEEcCCccChHhhhhcceeEEec-cCccchh
Q 001008 814 KSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLVKGTGKTTLAIGDGANDVGMLQEADIGVGIS-GVEGMQA 892 (1191)
Q Consensus 814 ~~l~~~~~~~~~~~~~~l~~~~~~~v~~r~sP~qK~~iV~~l~~~g~~vl~iGDG~ND~~ml~~AdvGI~i~-g~e~~~a 892 (1191)
.+++.+.++++.+... .+ .||||++|+||.++|+.+|+.|++|+|+|||.||+|||++|||||+|. |++. |
T Consensus 598 ~el~~~~~~el~~~v~----~~--~VfAr~sPe~K~~iV~~Lq~~G~vVamtGDGvNDaPALk~ADVGIAmg~gtdv--A 669 (903)
T PRK15122 598 TEIEAMDDAALAREVE----ER--TVFAKLTPLQKSRVLKALQANGHTVGFLGDGINDAPALRDADVGISVDSGADI--A 669 (903)
T ss_pred HhhhhCCHHHHHHHhh----hC--CEEEEeCHHHHHHHHHHHHhCCCEEEEECCCchhHHHHHhCCEEEEeCcccHH--H
Confidence 7776655545444433 33 499999999999999999999999999999999999999999999994 5565 8
Q ss_pred hhccceeccc--hhhhhHhhhhhchhhhhHhhHhHHHHHHhHHHHHHHHHHHHhhhccccccchhHHHHHHHHHHhhhhh
Q 001008 893 VMSSDYAIAQ--FRFLERLLLVHGHWCYRRISMMICYFFYKNLTFGFTLFWYEAYASFSGRPAYNDWYMSCYNVFFTSLP 970 (1191)
Q Consensus 893 ~~~aD~vl~~--f~~l~~lll~~GR~~~~~i~~~i~~~~~~n~~~~~~~~~~~~~~~~s~~~~~~~~~~l~~n~~~~~~p 970 (1191)
+++||+++++ |..+..+ +.+||.+|.|+++++.|.+..|+..++..++..++. +..++.+.|++|.|++++. |
T Consensus 670 keaADiVLldd~f~~Iv~a-i~~gR~i~~nI~k~i~~~ls~n~~~~~~~~~~~~~~---~~~pl~~~qil~~nli~D~-~ 744 (903)
T PRK15122 670 KESADIILLEKSLMVLEEG-VIKGRETFGNIIKYLNMTASSNFGNVFSVLVASAFI---PFLPMLAIHLLLQNLMYDI-S 744 (903)
T ss_pred HHhcCEEEecCChHHHHHH-HHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHh---ccchhHHHHHHHHHHHHHH-H
Confidence 9999999997 5558888 899999999999999999999998888777665553 3356899999999999995 9
Q ss_pred HHhhhcccccCChhhhhcCccchhccccCCccchhhHHHhhHhHHHHHHHHHHHHHhhhccccccCCCcceehhhhhhHH
Q 001008 971 VIALGVFDQDVSARLCLKYPLLYQEGVQNILFSWPRILGWMSNGVLSAIIIFFFTTNSIFNQAFRKDGHAVDYEVLGVAM 1050 (1191)
Q Consensus 971 ~~~l~~~~~d~~~~~~~~~P~ly~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 1050 (1191)
+++++.++ ++++.+ +.|+ .++.+++++.+++ ....+.+.+++.|++.++.+.. |.......+.+..
T Consensus 745 ~lal~~d~--~~~~~m-~~P~----~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~t~~ 810 (903)
T PRK15122 745 QLSLPWDK--MDKEFL-RKPR----KWDAKNIGRFMLW-IGPTSSIFDITTFALMWFVFAA------NSVEMQALFQSGW 810 (903)
T ss_pred HHhhcCCC--CCHhhc-CCCC----CCChhhhHHHHHH-HHHHHHHHHHHHHHHHHHHhcc------CcHhhhhhhHHHH
Confidence 99998754 444555 7776 5677788775543 2222333344444443332221 1000001244666
Q ss_pred hhHHHHHHHHHHHhhhccc--hhhHHHHHHHHHHHHHHHHHHHhcCCCCCcchhHHHHHHHHhcCHhHHHHHHHHHHHHH
Q 001008 1051 YSSVVWAVNCQMALSINYF--TWIQHFFIWGSIALWYIFLVVYGSLPPTFSTTAYKVLVEACAPSILYWLTTLLVVVSTL 1128 (1191)
Q Consensus 1051 f~~~v~~~~~~~~l~~~~~--~~~~~~~i~~si~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~s~~~wl~~l~~~~~~l 1128 (1191)
|+.+++.+.+.++ ..|+. .++.+...+..+++.++.+++..++|.. .+..+|+..++++.+|++++.++++.+
T Consensus 811 f~~l~~~q~~~~~-~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~----~~~~~f~~~~l~~~~~~~~~~~~~~~~ 885 (903)
T PRK15122 811 FIEGLLSQTLVVH-MLRTQKIPFIQSTAALPVLLTTGLIMAIGIYIPFS----PLGAMVGLEPLPWSYFPWLAATLLGYC 885 (903)
T ss_pred HHHHHHHHHHHHH-hhCcCCCCcCcchHHHHHHHHHHHHHHHHHHhhHH----HHHHHhCCCCCCHHHHHHHHHHHHHHH
Confidence 8888877766654 33332 3345556666677777777777777730 012267778889999999998888888
Q ss_pred HHHHHHHHHHH
Q 001008 1129 LPYFLYRAFQT 1139 (1191)
Q Consensus 1129 l~~~i~k~~~~ 1139 (1191)
+..++.|.+..
T Consensus 886 ~~~e~~k~~~~ 896 (903)
T PRK15122 886 LVAQGMKRFYI 896 (903)
T ss_pred HHHHHHHHHHh
Confidence 88878774433
No 15
>PRK10517 magnesium-transporting ATPase MgtA; Provisional
Probab=100.00 E-value=4.8e-98 Score=943.35 Aligned_cols=800 Identities=18% Similarity=0.222 Sum_probs=596.3
Q ss_pred CccccccCCCCceeecCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHhcccCCcCCCchhhHHHHHHHHHHHHHHHHHHH
Q 001008 47 NPEVVQLNYRGNYVSTTKYTAANFIPKSLFEQFRRVANIYFLVVAFVSFSPLAPYSAPSVLAPLIVVIGATMAKEGVEDW 126 (1191)
Q Consensus 47 ~~~~~~~~~g~N~i~~~k~~~~~flp~~l~~qf~~~~n~~fl~~~il~~~~~~~~~~~~~~~~l~~vl~~~~i~~~~~d~ 126 (1191)
+.++|+++||.|+++.+|.+.+. +.|++||..|++++++++++++++. +.+...+.++++++++.+.++++++
T Consensus 72 ea~~r~~~~G~N~l~~~~~~s~~---~~~~~~~~~p~~~lL~~aa~ls~~~----~~~~~a~~I~~iv~i~~~i~~~qe~ 144 (902)
T PRK10517 72 EVESAREQHGENELPAQKPLPWW---VHLWVCYRNPFNILLTILGAISYAT----EDLFAAGVIALMVAISTLLNFIQEA 144 (902)
T ss_pred HHHHHHHhcCCCCCCCCCCCCHH---HHHHHHHHhHHHHHHHHHHHHHHHH----ccHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34678999999999999887543 8899999999999999999998873 4555666777888899999999999
Q ss_pred HHhhhHHH---HhcceEEEEecC------CeEEEEeccccccccEEEEeCCCcccceEEEEeeeCCCceEEEEeccCCcc
Q 001008 127 RRRKQDIE---ANNRKVKVYGQD------HTFVETKWKNLRVGDLVKVHKDEYFPADLLLLSSIYEDGICYVETMNLDGE 197 (1191)
Q Consensus 127 ~r~k~~~~---~n~~~~~V~r~~------g~~~~i~~~~L~vGDIV~l~~ge~iPaD~~lL~ss~~~g~~~Vd~s~LtGE 197 (1191)
+..++.+. +.+.+++|+| | |++++|++++|+|||||.|++||.|||||+|+++++ +.||||+||||
T Consensus 145 ra~~~~~~L~~l~~~~a~ViR-~g~~~~~g~~~~I~~~eLvpGDiV~l~~Gd~IPaDg~li~g~~----l~VDES~LTGE 219 (902)
T PRK10517 145 RSTKAADALKAMVSNTATVLR-VINDKGENGWLEIPIDQLVPGDIIKLAAGDMIPADLRILQARD----LFVAQASLTGE 219 (902)
T ss_pred HHHHHHHHHHhhCCCeEEEEE-CCccCCCCeEEEEEHHhCCCCCEEEECCCCEEeeeEEEEEcCc----eEEEecCcCCC
Confidence 98877544 4578899999 7 789999999999999999999999999999999654 89999999999
Q ss_pred cccEeecchhhhcccCChhhhcccceEEEeecCCCCceeeEEEEEEcCeeeccCCCceeecCcEeecCCeEEEEEEEecc
Q 001008 198 TNLKLKRSLEATNHLRDEESFQKFTAVIKCEDPNERLYSFVGTLQYEGKQYPLSPQQILLRDSKLKNTDYVYGVVVFTGH 277 (1191)
Q Consensus 198 s~~~~K~~~~~~~~~~~~~~~~~~~~~i~~e~pn~~~~~f~Gt~~~~g~~~~l~~~n~l~rgs~l~nt~~~~gvVv~tG~ 277 (1191)
|.|+.|.+++..... .+..+.+...|+||.+.+|. +.++|++||.
T Consensus 220 S~PV~K~~~~~~~~~--------------~~~~~~~n~vfaGT~V~~G~---------------------~~~vV~atG~ 264 (902)
T PRK10517 220 SLPVEKFATTRQPEH--------------SNPLECDTLCFMGTNVVSGT---------------------AQAVVIATGA 264 (902)
T ss_pred CCceecccccccccc--------------cCccccccceeeCceEeeee---------------------EEEEEEEecc
Confidence 999999986532100 00001122567777777777 9999999999
Q ss_pred hhhH---hhccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcccccCCCccccccccCCCCCcccCCCCch
Q 001008 278 DTKV---MQNATDPPSKRSKIERKMDKIVYLLFSTLILISSTGSVFFGIETKRDIDGGKIRRWYLQPDDATVFYDPRRAP 354 (1191)
Q Consensus 278 ~Tki---~~~~~~~~~k~s~l~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 354 (1191)
+|.+ ......+..+++|+++.++++..++..+.++++.+.++++.+... .
T Consensus 265 ~T~~GkI~~~v~~~~~~~t~lq~~~~~i~~~l~~~~~~~~~~v~~i~~~~~~---------~------------------ 317 (902)
T PRK10517 265 NTWFGQLAGRVSEQDSEPNAFQQGISRVSWLLIRFMLVMAPVVLLINGYTKG---------D------------------ 317 (902)
T ss_pred ccHHHHHHHHhhccCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhhHHHHhcC---------C------------------
Confidence 9965 444556667789999999999998887777777665544322110 1
Q ss_pred hHHHHHHHHHHHHhhccccchhhhHHHHHHHHHHHHHhhcccccccCCCCCccccCccccccccceeEEEecCCCccccc
Q 001008 355 LAAFLHFLTGLMLYGYLIPISLYISIEIVKVLQSVFINHDRDMYYEDTDKPARARTSNLNEELGQVDTILSDKTGTLTCN 434 (1191)
Q Consensus 355 ~~~~~~~~~~i~ll~~~iP~sL~v~~~~~~~~~~~~i~~d~~m~~~~~~~~~~v~~~~~~e~Lg~v~~i~~DKTGTLT~n 434 (1191)
+...+..++.+++.+||++||++++++...++.++ +++++++|+++.+|+||++|+||||||||||+|
T Consensus 318 --~~~~l~~alsv~V~~~Pe~LP~~vt~~la~g~~~m----------ak~~ilVk~l~aiE~lg~v~vic~DKTGTLT~n 385 (902)
T PRK10517 318 --WWEAALFALSVAVGLTPEMLPMIVTSTLARGAVKL----------SKQKVIVKRLDAIQNFGAMDILCTDKTGTLTQD 385 (902)
T ss_pred --HHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHH----------HhCCcEEecchhhhhccCCCEEEecCCCccccc
Confidence 23367788999999999999999999999888877 889999999999999999999999999999999
Q ss_pred eeEEEEEEEcCeeeccchhHHHHHHHHhhCCcccccCCCCCCCCCCCCccccCCCccCCcccCChhhhcccCCCCCChHH
Q 001008 435 SMEFVKCSVAGVAYGRVMTEVERTLAKRKGERTFEVDDSQTDAPGLNGNIVESGKSVKGFNFRDERIMNGQWVNEPHSDV 514 (1191)
Q Consensus 435 ~m~~~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 514 (1191)
+|++.++.... +. .
T Consensus 386 ~m~V~~~~~~~---~~------------------------------------------------------------~--- 399 (902)
T PRK10517 386 KIVLENHTDIS---GK------------------------------------------------------------T--- 399 (902)
T ss_pred eEEEEEEecCC---CC------------------------------------------------------------C---
Confidence 99998753100 00 0
Q ss_pred HHHHHHHHhhhccceeccCCCCCceEEecCCccHHHHHHHHHHcCcEEEeecCCeeEEEecCCCCccccceEEEEeEeec
Q 001008 515 IQKFFRVLAICHTAIPDVNEETGEISYEAESPDEAAFVIAAREVGFQFFGSSQTSISLHELDPVSGQKVNRVYELLHVLE 594 (1191)
Q Consensus 515 ~~~~~~~lalC~~~~~~~~~~~~~~~y~~~sp~e~Alv~~a~~~g~~~~~~~~~~~~i~~~~~~~~~~~~~~~~il~~~~ 594 (1191)
.++++...++|.... . ..+||.|.|++.+++..+.. .....|+.++.+|
T Consensus 400 ~~~ll~~a~l~~~~~----~-------~~~~p~d~All~~a~~~~~~--------------------~~~~~~~~~~~~p 448 (902)
T PRK10517 400 SERVLHSAWLNSHYQ----T-------GLKNLLDTAVLEGVDEESAR--------------------SLASRWQKIDEIP 448 (902)
T ss_pred HHHHHHHHHhcCCcC----C-------CCCCHHHHHHHHHHHhcchh--------------------hhhhcCceEEEee
Confidence 023444444443221 0 13799999999998653210 0134577788999
Q ss_pred ccCCCceEEEEEEcCCCcEEEEEeccchHHHHHHhhc---------ChhhHHHHHHHHHHHHhccceEEEEEEEecCHHH
Q 001008 595 FTSSRKRMSVMVRNPENQLLLLCKGADSVMFERLSKH---------GQQFEAETRRHINRYAEAGLRTLVIAYRELGEDE 665 (1191)
Q Consensus 595 F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~---------~~~~~~~~~~~l~~~a~~GlR~L~~A~r~l~~~~ 665 (1191)
|||+||||+++++++++...+++|||++.|+++|+.. +++.++++.+..++++.+|+|++++|||+++.++
T Consensus 449 Fds~~k~msvvv~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~l~~~~~~~i~~~~~~~a~~G~rvlavA~k~~~~~~ 528 (902)
T PRK10517 449 FDFERRRMSVVVAENTEHHQLICKGALEEILNVCSQVRHNGEIVPLDDIMLRRIKRVTDTLNRQGLRVVAVATKYLPARE 528 (902)
T ss_pred eCCCcceEEEEEEECCCeEEEEEeCchHHHHHhchhhhcCCCeecCCHHHHHHHHHHHHHHHhcCCEEEEEEEecCCccc
Confidence 9999999999998777788999999999999999752 2234566777888999999999999999886532
Q ss_pred HHHHHHHHHHHhhcchhhHHHHHHHHHHHhhccceEEEeeeecccccCCcHHHHHHHHHcCCeEEEEeCCCHhhHHHHHH
Q 001008 666 YRIWEKEFLKAKTSVTSDREALVASAAEKIERDLILLGATAVEDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGY 745 (1191)
Q Consensus 666 ~~~~~~~~~~a~~~l~~~r~~~~~~~~~~iE~dl~llG~~~ieD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~ 745 (1191)
. ++ ....|+|++|+|+++++||+|++++++|+.|+++||+|+|+|||++.||.+||+
T Consensus 529 ~-~~----------------------~~~~e~~l~~lGli~~~Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~IA~ 585 (902)
T PRK10517 529 G-DY----------------------QRADESDLILEGYIAFLDPPKETTAPALKALKASGVTVKILTGDSELVAAKVCH 585 (902)
T ss_pred c-cc----------------------ccccccCceeeehHhhhCcchhhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHH
Confidence 1 00 011368999999999999999999999999999999999999999999999999
Q ss_pred HcCccccCceEEEEecCCchhhhhhhhcchHHHHHHHHHHHHHHHHhhcccccccccccceeEEEEeCchhhHHhHHHHH
Q 001008 746 ACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLE 825 (1191)
Q Consensus 746 ~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~ 825 (1191)
++||..+. +++|.+++.+.++++.
T Consensus 586 ~lGI~~~~--------------------------------------------------------v~~G~el~~l~~~el~ 609 (902)
T PRK10517 586 EVGLDAGE--------------------------------------------------------VLIGSDIETLSDDELA 609 (902)
T ss_pred HcCCCccC--------------------------------------------------------ceeHHHHHhCCHHHHH
Confidence 99994211 5566666655444444
Q ss_pred HHHHHHHhhcCceEEEcCChhhHHHHHHHhhcCCCEEEEEcCCccChHhhhhcceeEEec-cCccchhhhccceeccc--
Q 001008 826 KMFLDLAIDCASVICCRSSPKQKALVTRLVKGTGKTTLAIGDGANDVGMLQEADIGVGIS-GVEGMQAVMSSDYAIAQ-- 902 (1191)
Q Consensus 826 ~~~~~l~~~~~~~v~~r~sP~qK~~iV~~l~~~g~~vl~iGDG~ND~~ml~~AdvGI~i~-g~e~~~a~~~aD~vl~~-- 902 (1191)
+... .+ .||||++|+||.++|+.+|+.|++|+|+|||.||+|||++|||||+|. |++. |+++||+++++
T Consensus 610 ~~~~----~~--~VfAr~sPe~K~~IV~~Lq~~G~vVam~GDGvNDaPALk~ADVGIAmg~gtdv--AkeaADiVLldd~ 681 (902)
T PRK10517 610 NLAE----RT--TLFARLTPMHKERIVTLLKREGHVVGFMGDGINDAPALRAADIGISVDGAVDI--AREAADIILLEKS 681 (902)
T ss_pred HHHh----hC--cEEEEcCHHHHHHHHHHHHHCCCEEEEECCCcchHHHHHhCCEEEEeCCcCHH--HHHhCCEEEecCC
Confidence 4333 23 499999999999999999999999999999999999999999999994 4444 99999999998
Q ss_pred hhhhhHhhhhhchhhhhHhhHhHHHHHHhHHHHHHHHHHHHhhhccccccchhHHHHHHHHHHhhhhhHHhhhcccccCC
Q 001008 903 FRFLERLLLVHGHWCYRRISMMICYFFYKNLTFGFTLFWYEAYASFSGRPAYNDWYMSCYNVFFTSLPVIALGVFDQDVS 982 (1191)
Q Consensus 903 f~~l~~lll~~GR~~~~~i~~~i~~~~~~n~~~~~~~~~~~~~~~~s~~~~~~~~~~l~~n~~~~~~p~~~l~~~~~d~~ 982 (1191)
|..+..+ +.+||.+|.|+++++.|.+..|+..++..++..++. +..++.+.|++|.|++++ +|.++++.++ .
T Consensus 682 ~~~I~~a-i~~gR~i~~nI~k~i~~~ls~n~~~v~~~~~~~~~~---~~~pl~~~qiL~inl~~D-~~~~al~~d~---~ 753 (902)
T PRK10517 682 LMVLEEG-VIEGRRTFANMLKYIKMTASSNFGNVFSVLVASAFL---PFLPMLPLHLLIQNLLYD-VSQVAIPFDN---V 753 (902)
T ss_pred hHHHHHH-HHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHh---hhhhhHHHHHHHHHHHHH-HhHHhhcCCC---C
Confidence 5558888 899999999999999999999999988888766653 224689999999999999 7899998754 3
Q ss_pred hhhhhcCccchhccccCCccchhhHHHhhHhHHHHHHHHHHHHHhhhccccccCCCcceehhhhhhHHhhHHHHHHHHHH
Q 001008 983 ARLCLKYPLLYQEGVQNILFSWPRILGWMSNGVLSAIIIFFFTTNSIFNQAFRKDGHAVDYEVLGVAMYSSVVWAVNCQM 1062 (1191)
Q Consensus 983 ~~~~~~~P~ly~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~f~~~v~~~~~~~ 1062 (1191)
+..+|+.|+.+ +... .....+..|++.+++.+..+++.+.. +..... .....+.+..|+.+++.+.+.+
T Consensus 754 ~~~~m~~p~r~----~~~~----~~~~~~~~g~~~~~~~~~~~~~~~~~--~~~~~~-~~~~~~~~~~F~~~~~~q~~~~ 822 (902)
T PRK10517 754 DDEQIQKPQRW----NPAD----LGRFMVFFGPISSIFDILTFCLMWWV--FHANTP-ETQTLFQSGWFVVGLLSQTLIV 822 (902)
T ss_pred ChhhhcCCCCC----CHHH----HHHHHHHHHHHHHHHHHHHHHHHHHH--ccccch-hhHhHHHHHHHHHHHHHHHHHH
Confidence 44455666621 1111 11223444555444333322221111 000000 0001233344777777666665
Q ss_pred Hhhhccc--hhhHHHHHHHHHHHHHHHHHHHhcCCCCCcchhHHHHHHHHhcC--HhHHHHHHHHHHHHHHHHHHHHHHH
Q 001008 1063 ALSINYF--TWIQHFFIWGSIALWYIFLVVYGSLPPTFSTTAYKVLVEACAPS--ILYWLTTLLVVVSTLLPYFLYRAFQ 1138 (1191)
Q Consensus 1063 ~l~~~~~--~~~~~~~i~~si~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~s--~~~wl~~l~~~~~~ll~~~i~k~~~ 1138 (1191)
+ ..|+. .++.+...+..+++.++.+++..++|.. ....+|+..+++ +..|+.++.+.++ ++.....+.+.
T Consensus 823 ~-~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~----~~~~~~~~~~l~~~~~~~~~~~~~~~~-~~~e~~K~~~~ 896 (902)
T PRK10517 823 H-MIRTRRIPFIQSRAAWPLMIMTLIVMAVGIALPFS----PLASYLQLQALPLSYFPWLVAILAGYM-TLTQLVKGFYS 896 (902)
T ss_pred H-hhccCCCCcccchHHHHHHHHHHHHHHHHHHhhHH----HHHHhhCCcCCChhHHHHHHHHHHHHH-HHHHHHHHHHH
Confidence 4 33332 3456677888888888888877777721 011255566666 5677777666655 34333334444
Q ss_pred Hhc
Q 001008 1139 TRF 1141 (1191)
Q Consensus 1139 ~~~ 1141 (1191)
|+|
T Consensus 897 ~~~ 899 (902)
T PRK10517 897 RRY 899 (902)
T ss_pred Hhh
Confidence 444
No 16
>TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase. The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis.
Probab=100.00 E-value=6.6e-97 Score=934.85 Aligned_cols=793 Identities=18% Similarity=0.203 Sum_probs=592.8
Q ss_pred CccccccCCCCceeecCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHhcccCCcCCCchhhHHHHHHHHHHHHHHHHHHH
Q 001008 47 NPEVVQLNYRGNYVSTTKYTAANFIPKSLFEQFRRVANIYFLVVAFVSFSPLAPYSAPSVLAPLIVVIGATMAKEGVEDW 126 (1191)
Q Consensus 47 ~~~~~~~~~g~N~i~~~k~~~~~flp~~l~~qf~~~~n~~fl~~~il~~~~~~~~~~~~~~~~l~~vl~~~~i~~~~~d~ 126 (1191)
+.++|+++||+|+++.++.+.+. +.+++||..|++++++++++++++. +.+...+.++++++++.+.+.++++
T Consensus 38 ev~~r~~~~G~N~l~~~~~~~~~---~~~~~~~~~p~~~iL~~~a~ls~~~----~~~~~~~iI~~iv~~~~~i~~~~e~ 110 (867)
T TIGR01524 38 EVTERLAEFGPNQTVEEKKVPNL---RLLIRAFNNPFIYILAMLMGVSYLT----DDLEATVIIALMVLASGLLGFIQES 110 (867)
T ss_pred HHHHHHHhcCCCcCCCCCCCCHH---HHHHHHHhhHHHHHHHHHHHHHHHH----hhHHHHHHhhhHHHHHHHHHHHHHH
Confidence 34678999999999998865432 8899999999999999999999873 4555666677888888899999998
Q ss_pred HHhhhHHH---HhcceEEEEec-----CCeEEEEeccccccccEEEEeCCCcccceEEEEeeeCCCceEEEEeccCCccc
Q 001008 127 RRRKQDIE---ANNRKVKVYGQ-----DHTFVETKWKNLRVGDLVKVHKDEYFPADLLLLSSIYEDGICYVETMNLDGET 198 (1191)
Q Consensus 127 ~r~k~~~~---~n~~~~~V~r~-----~g~~~~i~~~~L~vGDIV~l~~ge~iPaD~~lL~ss~~~g~~~Vd~s~LtGEs 198 (1191)
+..++... +.+.+++|+|. ||++++|++++|+|||||.|++||.|||||+|+++++ +.||||+|||||
T Consensus 111 ~a~ka~~~L~~l~~~~~~V~R~~~~~~dg~~~~I~~~eLv~GDiV~l~~Gd~VPaDg~li~g~~----l~VDES~LTGES 186 (867)
T TIGR01524 111 RAERAAYALKNMVKNTATVLRVINENGNGSMDEVPIDALVPGDLIELAAGDIIPADARVISARD----LFINQSALTGES 186 (867)
T ss_pred HHHHHHHHHhhhccCeeEEEEecccCCCCeEEEEEhhcCCCCCEEEECCCCEEcccEEEEecCc----eEEEcccccCCC
Confidence 88766544 45778999983 7999999999999999999999999999999999654 899999999999
Q ss_pred ccEeecchhhhcccCChhhhcccceEEEeecCCCCceeeEEEEEEcCeeeccCCCceeecCcEeecCCeEEEEEEEecch
Q 001008 199 NLKLKRSLEATNHLRDEESFQKFTAVIKCEDPNERLYSFVGTLQYEGKQYPLSPQQILLRDSKLKNTDYVYGVVVFTGHD 278 (1191)
Q Consensus 199 ~~~~K~~~~~~~~~~~~~~~~~~~~~i~~e~pn~~~~~f~Gt~~~~g~~~~l~~~n~l~rgs~l~nt~~~~gvVv~tG~~ 278 (1191)
.|+.|.+++.... . .+..+.....|+||.+.+|. +.++|++||.+
T Consensus 187 ~PV~K~~~~~~~~---~-----------~~~~~~~n~vfaGT~v~~G~---------------------~~~~V~~tG~~ 231 (867)
T TIGR01524 187 LPVEKFVEDKRAR---D-----------PEILERENLCFMGTNVLSGH---------------------AQAVVLATGSS 231 (867)
T ss_pred CcccccCCccccc---c-----------ccccccccceecCCeEEEeE---------------------EEEEEEEEcCc
Confidence 9999998653210 0 00011122568888888877 99999999999
Q ss_pred hhH---hhccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcccccCCCccccccccCCCCCcccCCCCchh
Q 001008 279 TKV---MQNATDPPSKRSKIERKMDKIVYLLFSTLILISSTGSVFFGIETKRDIDGGKIRRWYLQPDDATVFYDPRRAPL 355 (1191)
Q Consensus 279 Tki---~~~~~~~~~k~s~l~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 355 (1191)
|.+ ...... +.+++|+++.++++..++..+.++++++.++++.+... .|
T Consensus 232 T~~gki~~~v~~-~~~~t~lq~~~~~i~~~~~~~~~~~~~i~~~~~~~~~~---------~~------------------ 283 (867)
T TIGR01524 232 TWFGSLAIAATE-RRGQTAFDKGVKSVSKLLIRFMLVMVPVVLMINGLMKG---------DW------------------ 283 (867)
T ss_pred cHHHHHHHHhhC-CCCCCcHHHHHHHHHHHHHHHHHHHHHHheehHHHhcC---------CH------------------
Confidence 965 444444 55678999999999999888887777766554332110 12
Q ss_pred HHHHHHHHHHHHhhccccchhhhHHHHHHHHHHHHHhhcccccccCCCCCccccCccccccccceeEEEecCCCccccce
Q 001008 356 AAFLHFLTGLMLYGYLIPISLYISIEIVKVLQSVFINHDRDMYYEDTDKPARARTSNLNEELGQVDTILSDKTGTLTCNS 435 (1191)
Q Consensus 356 ~~~~~~~~~i~ll~~~iP~sL~v~~~~~~~~~~~~i~~d~~m~~~~~~~~~~v~~~~~~e~Lg~v~~i~~DKTGTLT~n~ 435 (1191)
...+..++.+++.+||++||++++++...++.++ +++++++|+++.+|+||++++||||||||||+|+
T Consensus 284 --~~~~~~al~l~v~~iP~~Lp~~vt~~la~g~~~m----------ak~~ilvk~l~aiE~lg~v~vic~DKTGTLT~~~ 351 (867)
T TIGR01524 284 --LEAFLFALAVAVGLTPEMLPMIVSSNLAKGAINM----------SKKKVIVKELSAIQNFGAMDILCTDKTGTLTQDK 351 (867)
T ss_pred --HHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHH----------HhCCcEEccchhhhhccCccEEEecCCCccccCe
Confidence 2367788999999999999999999999988877 8899999999999999999999999999999999
Q ss_pred eEEEEEEEcCeeeccchhHHHHHHHHhhCCcccccCCCCCCCCCCCCccccCCCccCCcccCChhhhcccCCCCCChHHH
Q 001008 436 MEFVKCSVAGVAYGRVMTEVERTLAKRKGERTFEVDDSQTDAPGLNGNIVESGKSVKGFNFRDERIMNGQWVNEPHSDVI 515 (1191)
Q Consensus 436 m~~~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 515 (1191)
|++.+++.... . ..
T Consensus 352 m~v~~~~~~~~---~---------------------------------------------------------------~~ 365 (867)
T TIGR01524 352 IELEKHIDSSG---E---------------------------------------------------------------TS 365 (867)
T ss_pred EEEEEEecCCC---C---------------------------------------------------------------CH
Confidence 99988631100 0 01
Q ss_pred HHHHHHHhhhccceeccCCCCCceEEecCCccHHHHHHHHHHcCcEEEeecCCeeEEEecCCCCccccceEEEEeEeecc
Q 001008 516 QKFFRVLAICHTAIPDVNEETGEISYEAESPDEAAFVIAAREVGFQFFGSSQTSISLHELDPVSGQKVNRVYELLHVLEF 595 (1191)
Q Consensus 516 ~~~~~~lalC~~~~~~~~~~~~~~~y~~~sp~e~Alv~~a~~~g~~~~~~~~~~~~i~~~~~~~~~~~~~~~~il~~~~F 595 (1191)
.+++...++|+... . ..+||.|.|+++++...+... ....++.++.+||
T Consensus 366 ~~~l~~a~l~~~~~----~-------~~~~p~~~Al~~~~~~~~~~~--------------------~~~~~~~~~~~pF 414 (867)
T TIGR01524 366 ERVLKMAWLNSYFQ----T-------GWKNVLDHAVLAKLDESAARQ--------------------TASRWKKVDEIPF 414 (867)
T ss_pred HHHHHHHHHhCCCC----C-------CCCChHHHHHHHHHHhhchhh--------------------HhhcCceEEEecc
Confidence 12334444443221 0 136999999999987532110 1345677888999
Q ss_pred cCCCceEEEEEEcCCCcEEEEEeccchHHHHHHhhc---------ChhhHHHHHHHHHHHHhccceEEEEEEEecCHHHH
Q 001008 596 TSSRKRMSVMVRNPENQLLLLCKGADSVMFERLSKH---------GQQFEAETRRHINRYAEAGLRTLVIAYRELGEDEY 666 (1191)
Q Consensus 596 ~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~---------~~~~~~~~~~~l~~~a~~GlR~L~~A~r~l~~~~~ 666 (1191)
||+||||+++++++++...+++||||+.|+++|+.. +++.++++.+.+++++.+|+|++++|||+++.++.
T Consensus 415 ~s~~k~ms~~v~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~l~~~~~~~i~~~~~~~a~~G~rvlavA~~~~~~~~~ 494 (867)
T TIGR01524 415 DFDRRRLSVVVENRAEVTRLICKGAVEEMLTVCTHKRFGGAVVTLSESEKSELQDMTAEMNRQGIRVIAVATKTLKVGEA 494 (867)
T ss_pred CCCcCEEEEEEEcCCceEEEEEeCcHHHHHHhchhhhcCCceecCCHHHHHHHHHHHHHHHhcCCEEEEEEEeccCcccc
Confidence 999999999999876678999999999999999753 22345677888899999999999999999865431
Q ss_pred HHHHHHHHHHhhcchhhHHHHHHHHHHHhhccceEEEeeeecccccCCcHHHHHHHHHcCCeEEEEeCCCHhhHHHHHHH
Q 001008 667 RIWEKEFLKAKTSVTSDREALVASAAEKIERDLILLGATAVEDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYA 746 (1191)
Q Consensus 667 ~~~~~~~~~a~~~l~~~r~~~~~~~~~~iE~dl~llG~~~ieD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~ 746 (1191)
. + .+..|+||+|+|+++++||+|++++++|++|+++||+++|+|||+..||.+||++
T Consensus 495 ~-~----------------------~~~~e~~l~~lGli~l~Dp~R~~~~~aI~~l~~aGI~vvmiTGD~~~tA~aIA~~ 551 (867)
T TIGR01524 495 D-F----------------------TKTDEEQLIIEGFLGFLDPPKESTKEAIAALFKNGINVKVLTGDNEIVTARICQE 551 (867)
T ss_pred c-c----------------------cccccCCcEEEEEEEeeCCCchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHH
Confidence 0 0 0123689999999999999999999999999999999999999999999999999
Q ss_pred cCccccCceEEEEecCCchhhhhhhhcchHHHHHHHHHHHHHHHHhhcccccccccccceeEEEEeCchhhHHhHHHHHH
Q 001008 747 CSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEK 826 (1191)
Q Consensus 747 ~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~ 826 (1191)
+||..++ +++|.+++...++++.+
T Consensus 552 lGI~~~~--------------------------------------------------------v~~g~~l~~~~~~el~~ 575 (867)
T TIGR01524 552 VGIDAND--------------------------------------------------------FLLGADIEELSDEELAR 575 (867)
T ss_pred cCCCCCC--------------------------------------------------------eeecHhhhhCCHHHHHH
Confidence 9995321 44555555444334433
Q ss_pred HHHHHHhhcCceEEEcCChhhHHHHHHHhhcCCCEEEEEcCCccChHhhhhcceeEEec-cCccchhhhccceeccc--h
Q 001008 827 MFLDLAIDCASVICCRSSPKQKALVTRLVKGTGKTTLAIGDGANDVGMLQEADIGVGIS-GVEGMQAVMSSDYAIAQ--F 903 (1191)
Q Consensus 827 ~~~~l~~~~~~~v~~r~sP~qK~~iV~~l~~~g~~vl~iGDG~ND~~ml~~AdvGI~i~-g~e~~~a~~~aD~vl~~--f 903 (1191)
.. .. ..||||++|+||.++|+.+|+.|++|+|+|||.||+|||++|||||+|. |++. |+++||+++++ |
T Consensus 576 ~~----~~--~~vfAr~~Pe~K~~iV~~lq~~G~vVam~GDGvNDapALk~AdVGIAmg~gtdv--Ak~aADiVLldd~~ 647 (867)
T TIGR01524 576 EL----RK--YHIFARLTPMQKSRIIGLLKKAGHTVGFLGDGINDAPALRKADVGISVDTAADI--AKEASDIILLEKSL 647 (867)
T ss_pred Hh----hh--CeEEEECCHHHHHHHHHHHHhCCCEEEEECCCcccHHHHHhCCEEEEeCCccHH--HHHhCCEEEecCCh
Confidence 33 22 3499999999999999999999999999999999999999999999995 4455 89999999998 5
Q ss_pred hhhhHhhhhhchhhhhHhhHhHHHHHHhHHHHHHHHHHHHhhhccccccchhHHHHHHHHHHhhhhhHHhhhcccccCCh
Q 001008 904 RFLERLLLVHGHWCYRRISMMICYFFYKNLTFGFTLFWYEAYASFSGRPAYNDWYMSCYNVFFTSLPVIALGVFDQDVSA 983 (1191)
Q Consensus 904 ~~l~~lll~~GR~~~~~i~~~i~~~~~~n~~~~~~~~~~~~~~~~s~~~~~~~~~~l~~n~~~~~~p~~~l~~~~~d~~~ 983 (1191)
..+..+ +.+||.+|+|+++++.|.+..|+..++..++..++. +..|+.+.|++|+|++++ +|+++++..+ ++
T Consensus 648 ~~I~~a-i~~gR~i~~ni~k~i~~~ls~n~~~~~~~~~~~~~~---~~~pl~~~qil~inl~~d-~~~~al~~~~---~~ 719 (867)
T TIGR01524 648 MVLEEG-VIEGRNTFGNILKYLKMTASSNFGNVFSVLVASAFI---PFLPMLSLHLLIQNLLYD-FSQLTLPWDK---MD 719 (867)
T ss_pred HHHHHH-HHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHh---hhhhHHHHHHHHHHHHHH-HHHHhhcCCC---CC
Confidence 558888 899999999999999999999999888877766553 225699999999999999 7999998754 33
Q ss_pred hhhhcCccchhccccCCccchhhHHHhhHhHHHHHHHHHHHHHhhhccccccCCCcceehhhhhhHHhhHHHHHHHHHHH
Q 001008 984 RLCLKYPLLYQEGVQNILFSWPRILGWMSNGVLSAIIIFFFTTNSIFNQAFRKDGHAVDYEVLGVAMYSSVVWAVNCQMA 1063 (1191)
Q Consensus 984 ~~~~~~P~ly~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~f~~~v~~~~~~~~ 1063 (1191)
...|+.|+- ++... ....++..|++.+++.+..++..+.. +...+. .....+.+..|+.+++.+.+.++
T Consensus 720 ~~~m~~p~~----~~~~~----~~~~~~~~g~~~~~~~~~~~~~~~~~--~~~~~~-~~~~~~~t~~f~~~~~~~~~~~~ 788 (867)
T TIGR01524 720 REFLKKPHQ----WEQKG----MGRFMLCIGPVSSIFDIATFLLMWFV--FSANTV-EEQALFQSGWFVVGLLSQTLVVH 788 (867)
T ss_pred hHhhCCCCC----CChhh----HHHHHHHHHHHHHHHHHHHHHHHHHH--hcccch-hhhhHHHHHHHHHHHHHHHHHHH
Confidence 445566762 22222 22223345554443333222221110 000111 01112456668888877766664
Q ss_pred hhhccc--hhhHHHHHHHHHHHHHHHHHHHhcCCCC-CcchhHHHHHHHHhc--CHhHHHHHHHHHHHHHHHHHHHHH
Q 001008 1064 LSINYF--TWIQHFFIWGSIALWYIFLVVYGSLPPT-FSTTAYKVLVEACAP--SILYWLTTLLVVVSTLLPYFLYRA 1136 (1191)
Q Consensus 1064 l~~~~~--~~~~~~~i~~si~~~~i~~~i~~~~~~~-~~~~~~~~~~~~~~~--s~~~wl~~l~~~~~~ll~~~i~k~ 1136 (1191)
..|+. .++.+...+..+++.++.+++..++|.. ++. +|...+. ++..|+.++.+.++ +..++.|.
T Consensus 789 -~~R~~~~~~~~n~~~~~~~~~~~~~~~~~~~~p~~~~~~-----~f~~~~l~~~~~~~~~~~~~~~~--~~~e~~k~ 858 (867)
T TIGR01524 789 -MIRTEKIPFIQSRAAAPVMIATLLVMALGIIIPFSPLGH-----SIGLVSLPLSYFPWLIAILVGYM--ATMQLVKT 858 (867)
T ss_pred -hhCcCCCCcCcchHHHHHHHHHHHHHHHHHHhchhhhhh-----hhccccCCccHHHHHHHHHHHHH--HHHHHHHH
Confidence 33332 3456777888888888888888888842 232 4555544 45567777666554 34455553
No 17
>TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase. This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast.
Probab=100.00 E-value=1.1e-92 Score=885.85 Aligned_cols=705 Identities=18% Similarity=0.220 Sum_probs=556.5
Q ss_pred ccccccCCCCceeecCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHhcccCCcCCCchhhHHHHHHHHHHHHHHHHHHHH
Q 001008 48 PEVVQLNYRGNYVSTTKYTAANFIPKSLFEQFRRVANIYFLVVAFVSFSPLAPYSAPSVLAPLIVVIGATMAKEGVEDWR 127 (1191)
Q Consensus 48 ~~~~~~~~g~N~i~~~k~~~~~flp~~l~~qf~~~~n~~fl~~~il~~~~~~~~~~~~~~~~l~~vl~~~~i~~~~~d~~ 127 (1191)
.++|+++||+|.++.++.+.| +.|++||.+|+++.++++++++++. +.|...+.++++++++++.+++++++
T Consensus 7 a~~r~~~~G~N~~~~~~~~~~----~~~~~~~~~~~~~lL~~aa~~s~~~----~~~~~~~~i~~~~~i~~~i~~~qe~~ 78 (755)
T TIGR01647 7 AKKRLAKYGPNELPEKKVSPL----LKFLGFFWNPLSWVMEAAAIIAIAL----ENWVDFVIILGLLLLNATIGFIEENK 78 (755)
T ss_pred HHHHHHhcCCCCCCCCCCCHH----HHHHHHHhchHHHHHHHHHHHHHhh----cchhhhhhhhhhhHHHHHHHHHHHHH
Confidence 456889999999998666544 7889999999999999999999884 44555666778888888999999999
Q ss_pred HhhhHHHH---hcceEEEEecCCeEEEEeccccccccEEEEeCCCcccceEEEEeeeCCCceEEEEeccCCcccccEeec
Q 001008 128 RRKQDIEA---NNRKVKVYGQDHTFVETKWKNLRVGDLVKVHKDEYFPADLLLLSSIYEDGICYVETMNLDGETNLKLKR 204 (1191)
Q Consensus 128 r~k~~~~~---n~~~~~V~r~~g~~~~i~~~~L~vGDIV~l~~ge~iPaD~~lL~ss~~~g~~~Vd~s~LtGEs~~~~K~ 204 (1191)
..++.+.+ .+.+++|+| ||++++|++++|+|||||.|++||.|||||+++++++ +.||||+|||||.|+.|.
T Consensus 79 a~~~~~~L~~~~~~~~~V~R-dg~~~~I~~~~Lv~GDiV~l~~Gd~IPaDg~vi~g~~----~~VDeS~LTGES~PV~K~ 153 (755)
T TIGR01647 79 AGNAVEALKQSLAPKARVLR-DGKWQEIPASELVPGDVVRLKIGDIVPADCRLFEGDY----IQVDQAALTGESLPVTKK 153 (755)
T ss_pred HHHHHHHHHhhCCCeEEEEE-CCEEEEEEhhhCcCCCEEEECCCCEEeceEEEEecCc----eEEEcccccCCccceEec
Confidence 88876554 478999999 9999999999999999999999999999999999544 899999999999999998
Q ss_pred chhhhcccCChhhhcccceEEEeecCCCCceeeEEEEEEcCeeeccCCCceeecCcEeecCCeEEEEEEEecchhhH---
Q 001008 205 SLEATNHLRDEESFQKFTAVIKCEDPNERLYSFVGTLQYEGKQYPLSPQQILLRDSKLKNTDYVYGVVVFTGHDTKV--- 281 (1191)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~i~~e~pn~~~~~f~Gt~~~~g~~~~l~~~n~l~rgs~l~nt~~~~gvVv~tG~~Tki--- 281 (1191)
+++. .|+||.+.+|. +.++|++||.+|.+
T Consensus 154 ~~~~---------------------------v~aGT~v~~G~---------------------~~~~V~~tG~~T~~g~i 185 (755)
T TIGR01647 154 TGDI---------------------------AYSGSTVKQGE---------------------AEAVVTATGMNTFFGKA 185 (755)
T ss_pred cCCe---------------------------eeccCEEEccE---------------------EEEEEEEcCCccHHHHH
Confidence 7653 39999999998 99999999999965
Q ss_pred hhccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcccccCCCccccccccCCCCCcccCCCCchhHHHHHH
Q 001008 282 MQNATDPPSKRSKIERKMDKIVYLLFSTLILISSTGSVFFGIETKRDIDGGKIRRWYLQPDDATVFYDPRRAPLAAFLHF 361 (1191)
Q Consensus 282 ~~~~~~~~~k~s~l~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 361 (1191)
......++..++++++.++++..+++++.++++++.++++...... + +...+
T Consensus 186 ~~lv~~~~~~~~~lq~~~~~i~~~~~~~~~~~~~i~~~~~~~~~~~--------~--------------------~~~~~ 237 (755)
T TIGR01647 186 AALVQSTETGSGHLQKILSKIGLFLIVLIGVLVLIELVVLFFGRGE--------S--------------------FREGL 237 (755)
T ss_pred HHHhhccCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC--------C--------------------HHHHH
Confidence 3445566667799999999999999888888777766554331111 1 23367
Q ss_pred HHHHHHhhccccchhhhHHHHHHHHHHHHHhhcccccccCCCCCccccCccccccccceeEEEecCCCccccceeEEEEE
Q 001008 362 LTGLMLYGYLIPISLYISIEIVKVLQSVFINHDRDMYYEDTDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFVKC 441 (1191)
Q Consensus 362 ~~~i~ll~~~iP~sL~v~~~~~~~~~~~~i~~d~~m~~~~~~~~~~v~~~~~~e~Lg~v~~i~~DKTGTLT~n~m~~~~~ 441 (1191)
..++.+++.+||++||++++++...++.++ +++++++|+++.+|+||++|+||||||||||+|+|++.++
T Consensus 238 ~~~i~vlv~a~P~~Lp~~~~~~la~g~~r~----------ak~gilvk~l~alE~lg~v~~i~~DKTGTLT~~~~~v~~~ 307 (755)
T TIGR01647 238 QFALVLLVGGIPIAMPAVLSVTMAVGAAEL----------AKKKAIVTRLTAIEELAGMDILCSDKTGTLTLNKLSIDEI 307 (755)
T ss_pred HHHHHHHHHhCCcchHHHHHHHHHHHHHHH----------HhCCeEEcccHHHHhccCCcEEEecCCCccccCceEEEEE
Confidence 788999999999999999999999998887 8899999999999999999999999999999999999998
Q ss_pred EEcCeeeccchhHHHHHHHHhhCCcccccCCCCCCCCCCCCccccCCCccCCcccCChhhhcccCCCCCChHHHHHHHHH
Q 001008 442 SVAGVAYGRVMTEVERTLAKRKGERTFEVDDSQTDAPGLNGNIVESGKSVKGFNFRDERIMNGQWVNEPHSDVIQKFFRV 521 (1191)
Q Consensus 442 ~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 521 (1191)
+..+..++ ..+++..
T Consensus 308 ~~~~~~~~-----------------------------------------------------------------~~~~l~~ 322 (755)
T TIGR01647 308 LPFFNGFD-----------------------------------------------------------------KDDVLLY 322 (755)
T ss_pred EecCCCCC-----------------------------------------------------------------HHHHHHH
Confidence 65321000 1134455
Q ss_pred HhhhccceeccCCCCCceEEecCCccHHHHHHHHHHcCcEEEeecCCeeEEEecCCCCccccceEEEEeEeecccCCCce
Q 001008 522 LAICHTAIPDVNEETGEISYEAESPDEAAFVIAAREVGFQFFGSSQTSISLHELDPVSGQKVNRVYELLHVLEFTSSRKR 601 (1191)
Q Consensus 522 lalC~~~~~~~~~~~~~~~y~~~sp~e~Alv~~a~~~g~~~~~~~~~~~~i~~~~~~~~~~~~~~~~il~~~~F~s~rkr 601 (1191)
.++|+.. .++||.|.|+++++++.+. ....+++++.+||++.+|+
T Consensus 323 a~~~~~~-------------~~~~pi~~Ai~~~~~~~~~----------------------~~~~~~~~~~~pf~~~~k~ 367 (755)
T TIGR01647 323 AALASRE-------------EDQDAIDTAVLGSAKDLKE----------------------ARDGYKVLEFVPFDPVDKR 367 (755)
T ss_pred HHHhCCC-------------CCCChHHHHHHHHHHHhHH----------------------HHhcCceEEEeccCCCCCe
Confidence 5556420 1369999999998876431 0335677889999999999
Q ss_pred EEEEEEcCC-CcEEEEEeccchHHHHHHhhcChhhHHHHHHHHHHHHhccceEEEEEEEecCHHHHHHHHHHHHHHhhcc
Q 001008 602 MSVMVRNPE-NQLLLLCKGADSVMFERLSKHGQQFEAETRRHINRYAEAGLRTLVIAYRELGEDEYRIWEKEFLKAKTSV 680 (1191)
Q Consensus 602 msviv~~~~-~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~l~~~a~~GlR~L~~A~r~l~~~~~~~~~~~~~~a~~~l 680 (1191)
|++++++++ |+.++++||||+.|+++|+.. .+.++++.+.+++++.+|+|++++|+|+.
T Consensus 368 ~~~~v~~~~~g~~~~~~kGa~e~il~~c~~~-~~~~~~~~~~~~~~~~~G~rvl~vA~~~~------------------- 427 (755)
T TIGR01647 368 TEATVEDPETGKRFKVTKGAPQVILDLCDNK-KEIEEKVEEKVDELASRGYRALGVARTDE------------------- 427 (755)
T ss_pred EEEEEEeCCCceEEEEEeCChHHHHHhcCCc-HHHHHHHHHHHHHHHhCCCEEEEEEEEcC-------------------
Confidence 999998764 778899999999999999753 24567788889999999999999999821
Q ss_pred hhhHHHHHHHHHHHhhccceEEEeeeecccccCCcHHHHHHHHHcCCeEEEEeCCCHhhHHHHHHHcCccccCceEEEEe
Q 001008 681 TSDREALVASAAEKIERDLILLGATAVEDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVIT 760 (1191)
Q Consensus 681 ~~~r~~~~~~~~~~iE~dl~llG~~~ieD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~i~ 760 (1191)
|.+|+|+|+++++||+|++++++|+.|+++||+++|+|||++.||.+||+++||..+. ..
T Consensus 428 ---------------e~~l~~~Gli~l~Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~IA~~lGI~~~~-----~~ 487 (755)
T TIGR01647 428 ---------------EGRWHFLGLLPLFDPPRHDTKETIERARHLGVEVKMVTGDHLAIAKETARRLGLGTNI-----YT 487 (755)
T ss_pred ---------------CCCcEEEEEeeccCCChhhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCC-----cC
Confidence 3689999999999999999999999999999999999999999999999999995421 00
Q ss_pred cCCchhhhhhhhcchHHHHHHHHHHHHHHHHhhcccccccccccceeEEEEeCchhhHHhHHHHHHHHHHHHhhcCceEE
Q 001008 761 LDSPDMEALEKQGDKENITKVSLESVTKQIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVIC 840 (1191)
Q Consensus 761 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~l~~~~~~~v~ 840 (1191)
++ . +.+|++++...++++.+.. ..+ .+|
T Consensus 488 ~~-----~-----------------------------------------l~~~~~~~~~~~~~~~~~~----~~~--~vf 515 (755)
T TIGR01647 488 AD-----V-----------------------------------------LLKGDNRDDLPSGELGEMV----EDA--DGF 515 (755)
T ss_pred HH-----H-----------------------------------------hcCCcchhhCCHHHHHHHH----HhC--CEE
Confidence 00 0 1112222212222333332 233 399
Q ss_pred EcCChhhHHHHHHHhhcCCCEEEEEcCCccChHhhhhcceeEEec-cCccchhhhccceeccc--hhhhhHhhhhhchhh
Q 001008 841 CRSSPKQKALVTRLVKGTGKTTLAIGDGANDVGMLQEADIGVGIS-GVEGMQAVMSSDYAIAQ--FRFLERLLLVHGHWC 917 (1191)
Q Consensus 841 ~r~sP~qK~~iV~~l~~~g~~vl~iGDG~ND~~ml~~AdvGI~i~-g~e~~~a~~~aD~vl~~--f~~l~~lll~~GR~~ 917 (1191)
||++|+||.++|+.+|+.|++|+|+|||.||+|||++|||||+|. |++. |+++||+++++ |..+..+ +.+||.+
T Consensus 516 Ar~~Pe~K~~iV~~lq~~G~~VamvGDGvNDapAL~~AdVGIAm~~gtdv--AkeaADivLl~d~l~~I~~a-i~~gR~~ 592 (755)
T TIGR01647 516 AEVFPEHKYEIVEILQKRGHLVGMTGDGVNDAPALKKADVGIAVAGATDA--ARSAADIVLTEPGLSVIVDA-ILESRKI 592 (755)
T ss_pred EecCHHHHHHHHHHHHhcCCEEEEEcCCcccHHHHHhCCeeEEecCCcHH--HHHhCCEEEEcCChHHHHHH-HHHHHHH
Confidence 999999999999999999999999999999999999999999994 4444 89999999998 5558888 8999999
Q ss_pred hhHhhHhHHHHHHhHHHHHHHHHHHHhhhccccccchhHHHHHHHHHHhhhhhHHhhhcccccCChhhhhcCccchhccc
Q 001008 918 YRRISMMICYFFYKNLTFGFTLFWYEAYASFSGRPAYNDWYMSCYNVFFTSLPVIALGVFDQDVSARLCLKYPLLYQEGV 997 (1191)
Q Consensus 918 ~~~i~~~i~~~~~~n~~~~~~~~~~~~~~~~s~~~~~~~~~~l~~n~~~~~~p~~~l~~~~~d~~~~~~~~~P~ly~~~~ 997 (1191)
|+|+++++.|.+..|+..++..++..++.++ + ++++|++|.|++.+. |.+++++.+.+++ ++|+
T Consensus 593 ~~ni~k~i~~~~~~n~~~~~~~~~~~l~~~~---~-l~~~~il~~~l~~d~-~~~~l~~~~~~~~-----~~p~------ 656 (755)
T TIGR01647 593 FQRMKSYVIYRIAETIRIVFFFGLLILILNF---Y-FPPIMVVIIAILNDG-TIMTIAYDNVKPS-----KLPQ------ 656 (755)
T ss_pred HHHHHHHHHHHhcccHHHHHHHHHHHHHhCc---c-hhHHHHHHHHHHHhH-hHhhccCCCCCCC-----CCCC------
Confidence 9999999999999999988776666554432 3 899999999999995 7888877653321 2232
Q ss_pred cCCccchhhHHHhhHhHHHHHHHHHHHHHhhhccccc-cCCCcceehhhhhhHHhhHHHHHHHHHHHh
Q 001008 998 QNILFSWPRILGWMSNGVLSAIIIFFFTTNSIFNQAF-RKDGHAVDYEVLGVAMYSSVVWAVNCQMAL 1064 (1191)
Q Consensus 998 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~f~~~v~~~~~~~~l 1064 (1191)
...+ .+.+...+..|++.++..|.++++.+....+ ...+.......+.|+.|+.+++...+.++.
T Consensus 657 -~~~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~~~~~~~~~~~~ 722 (755)
T TIGR01647 657 -RWNL-REVFTMSTVLGIYLVISTFLLLAIALDTSFFIDKFGLQLLHGNLQSLIYLQVSISGQATIFV 722 (755)
T ss_pred -ccch-HHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhcccccccHhhhHHHHHHHHHHHHHHHHhe
Confidence 2223 2445556678888888777776655431001 011111123357899999999988777653
No 18
>KOG0208 consensus Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=7.8e-89 Score=791.95 Aligned_cols=814 Identities=18% Similarity=0.235 Sum_probs=587.8
Q ss_pred cccccCCCCceeecCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHhcccCCcCCCchhhHHHHHHHHHHHHHHHHHHHHH
Q 001008 49 EVVQLNYRGNYVSTTKYTAANFIPKSLFEQFRRVANIYFLVVAFVSFSPLAPYSAPSVLAPLIVVIGATMAKEGVEDWRR 128 (1191)
Q Consensus 49 ~~~~~~~g~N~i~~~k~~~~~flp~~l~~qf~~~~n~~fl~~~il~~~~~~~~~~~~~~~~l~~vl~~~~i~~~~~d~~r 128 (1191)
.+|+.-||.|.|..+..+.+ ..|+++...|+++|..+..++|... +++.++..++++.+.|.+...+|.++.
T Consensus 167 ~~r~~iyG~N~i~l~ik~i~----~iLv~EvL~PfYlFQ~fSv~lW~~d----~Y~~YA~cI~iisv~Si~~sv~e~r~q 238 (1140)
T KOG0208|consen 167 IDRRIIYGRNVISLPIKSIS----QILVKEVLNPFYLFQAFSVALWLAD----SYYYYAFCIVIISVYSIVLSVYETRKQ 238 (1140)
T ss_pred HhHHhhcCCceeeeecccHH----HHHHHhccchHHHHHhHHhhhhhcc----cchhhhhHHHHHHHHHHHHHHHHHHHH
Confidence 35678899999999999887 7899999999999999988888773 566677777777888888888888887
Q ss_pred hhhHHHHh--cceEEEEecCCeEEEEeccccccccEEEEeC-CCcccceEEEEeeeCCCceEEEEeccCCcccccEeecc
Q 001008 129 RKQDIEAN--NRKVKVYGQDHTFVETKWKNLRVGDLVKVHK-DEYFPADLLLLSSIYEDGICYVETMNLDGETNLKLKRS 205 (1191)
Q Consensus 129 ~k~~~~~n--~~~~~V~r~~g~~~~i~~~~L~vGDIV~l~~-ge~iPaD~~lL~ss~~~g~~~Vd~s~LtGEs~~~~K~~ 205 (1191)
.+..+++- ...|+|+| ||.|++|.++||+||||+.+.+ +-..|||++|++ |.|.||||+|||||.|+.|.|
T Consensus 239 s~rlr~mv~~~~~V~V~R-~g~~~ti~S~eLVPGDil~i~~~~~~~PcDa~Li~-----g~civNEsmLTGESVPv~K~~ 312 (1140)
T KOG0208|consen 239 SIRLRSMVKFTCPVTVIR-DGFWETVDSSELVPGDILYIPPPGKIMPCDALLIS-----GDCIVNESMLTGESVPVTKTP 312 (1140)
T ss_pred HHHHHHHhcCCceEEEEE-CCEEEEEeccccccccEEEECCCCeEeecceEEEe-----CcEEeecccccCCcccccccC
Confidence 77777775 45799999 9999999999999999999998 889999999999 679999999999999999999
Q ss_pred hhhhcccCChhhhcccceEEEeecCCCCceeeEEEEEEcCeeeccCCCceeecCcEeecCCeEEEEEEEecchh---hHh
Q 001008 206 LEATNHLRDEESFQKFTAVIKCEDPNERLYSFVGTLQYEGKQYPLSPQQILLRDSKLKNTDYVYGVVVFTGHDT---KVM 282 (1191)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~i~~e~pn~~~~~f~Gt~~~~g~~~~l~~~n~l~rgs~l~nt~~~~gvVv~tG~~T---ki~ 282 (1191)
.+.-.+ .....+.+...+.....|.||.+++.+.. -.+-+.|+|++||..| ++.
T Consensus 313 l~~~~~--------~~~~~~~~~~~~~rh~lfcGT~vlq~r~~---------------~g~~v~a~V~RTGF~T~KGqLV 369 (1140)
T KOG0208|consen 313 LPMGTD--------SLDSITISMSTNSRHTLFCGTKVLQARAY---------------LGGPVLAMVLRTGFSTTKGQLV 369 (1140)
T ss_pred Cccccc--------cCcCeeechhhcCcceeeccceEEEeecC---------------CCCceEEEEEeccccccccHHH
Confidence 872111 01111223334555577999998864311 1233899999999999 567
Q ss_pred hccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcccccCCCccccccccCCCCCcccCCCCchhHHHHHHH
Q 001008 283 QNATDPPSKRSKIERKMDKIVYLLFSTLILISSTGSVFFGIETKRDIDGGKIRRWYLQPDDATVFYDPRRAPLAAFLHFL 362 (1191)
Q Consensus 283 ~~~~~~~~k~s~l~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 362 (1191)
++...++....++-+..-+++..+.++.++-.+.+++. ....+. ..-..++
T Consensus 370 RsilyPkP~~fkfyrds~~fi~~l~~ia~~gfiy~~i~-l~~~g~----------------------------~~~~iii 420 (1140)
T KOG0208|consen 370 RSILYPKPVNFKFYRDSFKFILFLVIIALIGFIYTAIV-LNLLGV----------------------------PLKTIII 420 (1140)
T ss_pred HhhcCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHhHh-HHHcCC----------------------------CHHHHhh
Confidence 77777777777777777666655544333322222221 111111 1233788
Q ss_pred HHHHHhhccccchhhhHHHHHHHHHHHHHhhcccccccCCCCCccccCccccccccceeEEEecCCCccccceeEEEEEE
Q 001008 363 TGLMLYGYLIPISLYISIEIVKVLQSVFINHDRDMYYEDTDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFVKCS 442 (1191)
Q Consensus 363 ~~i~ll~~~iP~sL~v~~~~~~~~~~~~i~~d~~m~~~~~~~~~~v~~~~~~e~Lg~v~~i~~DKTGTLT~n~m~~~~~~ 442 (1191)
+++.++...+|.+||.++++.....-.++ ++++|.|-+++.+...|+++.+|||||||||++.+.+-.+.
T Consensus 421 rsLDliTi~VPPALPAaltvG~~~a~~RL----------kkk~IfCisP~rIn~~G~i~~~cFDKTGTLTEdGLDl~gv~ 490 (1140)
T KOG0208|consen 421 RSLDLITIVVPPALPAALTVGIIYAQSRL----------KKKGIFCISPQRINLCGKLNLVCFDKTGTLTEDGLDLWGVV 490 (1140)
T ss_pred hhhcEEEEecCCCchhhhhHHHHHHHHHH----------HhcCeEEcCccceeecceeeEEEEcCCCcccccceeEEEEE
Confidence 99999999999999999999998888888 88999999999999999999999999999999999998886
Q ss_pred EcCeeeccchhHHHHHHHHhhCCcccccCCCCCCCCCCCCccccCCCccCCcccCChhhhcccCCCCCChHHHHHHHHHH
Q 001008 443 VAGVAYGRVMTEVERTLAKRKGERTFEVDDSQTDAPGLNGNIVESGKSVKGFNFRDERIMNGQWVNEPHSDVIQKFFRVL 522 (1191)
Q Consensus 443 i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l 522 (1191)
.-...-..+ .+.... .+.... +.... .-+........+..++
T Consensus 491 ~~~~~~~~~-~~~~~~--~~~~~~----------------------------------~~~~l-~~~~~~~~~~~~~~a~ 532 (1140)
T KOG0208|consen 491 PVERNVDDG-PELKVV--TEDSLQ----------------------------------LFYKL-SLRSSSLPMGNLVAAM 532 (1140)
T ss_pred ecccccccc-chhhhh--hhhhcc----------------------------------ceeec-cccccCCchHHHHHHH
Confidence 532211100 000000 000000 00000 0000111134688999
Q ss_pred hhhccceeccCCCCCceEEecCCccHHHHHHHHHHcCcEEEeecC--------Cee---EEEecC---CCCccccceEEE
Q 001008 523 AICHTAIPDVNEETGEISYEAESPDEAAFVIAAREVGFQFFGSSQ--------TSI---SLHELD---PVSGQKVNRVYE 588 (1191)
Q Consensus 523 alC~~~~~~~~~~~~~~~y~~~sp~e~Alv~~a~~~g~~~~~~~~--------~~~---~i~~~~---~~~~~~~~~~~~ 588 (1191)
|.||+.....+. ..++|.|.-+.+ ..|+.+.+.+. +.+ .++... +.+.+.-.+.+.
T Consensus 533 atCHSL~~v~g~-------l~GDPLdlkmfe---~t~w~~ee~~~~~~~~~~~~~~~p~v~~p~~~~~~~~t~~~~~~~s 602 (1140)
T KOG0208|consen 533 ATCHSLTLVDGT-------LVGDPLDLKMFE---STGWVYEEADIEDEATREFNTLIPTVVRPPENAFNQSTECGEGEIS 602 (1140)
T ss_pred hhhceeEEeCCe-------eccCceeeeeee---ccceEEEeccccchhhhhhCCccCCEeCCCcccccCCCcCCCcceE
Confidence 999988765332 236888876665 45677654210 111 111111 111111123799
Q ss_pred EeEeecccCCCceEEEEEEcC-CCcEEEEEeccchHHHHHHhhcChhhHHHHHHHHHHHHhccceEEEEEEEecCHHHHH
Q 001008 589 LLHVLEFTSSRKRMSVMVRNP-ENQLLLLCKGADSVMFERLSKHGQQFEAETRRHINRYAEAGLRTLVIAYRELGEDEYR 667 (1191)
Q Consensus 589 il~~~~F~s~rkrmsviv~~~-~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~l~~~a~~GlR~L~~A~r~l~~~~~~ 667 (1191)
+++.+||+|.-+||||||.++ +.+..+|+|||||.|.+.|+++ ..+.++.+.++.|+.+|+|++++|+|+++..
T Consensus 603 i~k~feF~S~LrRMSVIv~~~~e~~~~~ftKGaPE~I~~ic~p~--tvP~dy~evl~~Yt~~GfRVIAlA~K~L~~~--- 677 (1140)
T KOG0208|consen 603 IVKQFEFSSALRRMSVIVSTGGEDKMMVFTKGAPESIAEICKPE--TVPADYQEVLKEYTHQGFRVIALASKELETS--- 677 (1140)
T ss_pred EEEecccchhhheEEEEEecCCCCceEeeccCCHHHHHHhcCcc--cCCccHHHHHHHHHhCCeEEEEEecCccCcc---
Confidence 999999999999999999986 4678999999999999999976 5788899999999999999999999999875
Q ss_pred HHHHHHHHHhhcchhhHHHHHHHHHHHhhccceEEEeeeecccccCCcHHHHHHHHHcCCeEEEEeCCCHhhHHHHHHHc
Q 001008 668 IWEKEFLKAKTSVTSDREALVASAAEKIERDLILLGATAVEDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYAC 747 (1191)
Q Consensus 668 ~~~~~~~~a~~~l~~~r~~~~~~~~~~iE~dl~llG~~~ieD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~ 747 (1191)
.|.+. ....++.+|.||+|+|++.+|++||+.++.+|++|++|+|+++|+||||..||+.+|++|
T Consensus 678 ~~~~~---------------~~~~Rd~vEs~l~FlGLiVmeNkLK~~T~~VI~eL~~AnIRtVMcTGDNllTaisVakeC 742 (1140)
T KOG0208|consen 678 TLQKA---------------QKLSRDTVESNLEFLGLIVMENKLKEETKRVIDELNRANIRTVMCTGDNLLTAISVAKEC 742 (1140)
T ss_pred hHHHH---------------hhccHhhhhccceeeEEEEeecccccccHHHHHHHHhhcceEEEEcCCchheeeehhhcc
Confidence 33322 122447889999999999999999999999999999999999999999999999999999
Q ss_pred CccccCceEEEEecCCchhhhhhhh--cchHHHHHHHH-HHHHHHHHhhcccccccccccceeEEEEeCchhhHHhHHHH
Q 001008 748 SLLRQEMKQIVITLDSPDMEALEKQ--GDKENITKVSL-ESVTKQIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKL 824 (1191)
Q Consensus 748 gl~~~~~~~~~i~~~~~~~~~~~~~--~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~ 824 (1191)
|++.+...++.......+......- .+.+....... .+.... ...............+.+.++|+.++.+. .+.
T Consensus 743 gmi~p~~~v~~~~~~~~~~~~~~~i~w~~ve~~~~~~~~~~~~~~--~~~~~~~~d~~~~~~yhlA~sG~~f~~i~-~~~ 819 (1140)
T KOG0208|consen 743 GMIEPQVKVIIPELEPPEDDSIAQIVWLCVESQTQFLDPKEPDPD--LASVKLSLDVLSEKDYHLAMSGKTFQVIL-EHF 819 (1140)
T ss_pred cccCCCCeEEEEeccCCccCCCceeEEEEccCccccCCCCccCcc--ccCCccChhhhccceeEEEecCchhHHHH-hhc
Confidence 9999998888776553221111000 00000000000 000000 00000000112356789999999999888 566
Q ss_pred HHHHHHHHhhcCceEEEcCChhhHHHHHHHhhcCCCEEEEEcCCccChHhhhhcceeEEeccCccchhhhccceecc--c
Q 001008 825 EKMFLDLAIDCASVICCRSSPKQKALVTRLVKGTGKTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAIA--Q 902 (1191)
Q Consensus 825 ~~~~~~l~~~~~~~v~~r~sP~qK~~iV~~l~~~g~~vl~iGDG~ND~~ml~~AdvGI~i~g~e~~~a~~~aD~vl~--~ 902 (1191)
.+.+.++..++. |||||+|.||+++|+.+|+.|+.|+|||||+|||.||++|||||+++.+| |.-||.|... +
T Consensus 820 ~~l~~~Il~~~~--VfARMsP~qK~~Lie~lQkl~y~VgfCGDGANDCgALKaAdvGISLSeaE---ASvAApFTSk~~~ 894 (1140)
T KOG0208|consen 820 PELVPKILLKGT--VFARMSPDQKAELIEALQKLGYKVGFCGDGANDCGALKAADVGISLSEAE---ASVAAPFTSKTPS 894 (1140)
T ss_pred HHHHHHHHhcCe--EEeecCchhHHHHHHHHHhcCcEEEecCCCcchhhhhhhcccCcchhhhh---HhhcCccccCCCc
Confidence 677777777766 99999999999999999999999999999999999999999999998888 7899999987 4
Q ss_pred hhhhhHhhhhhchhhhhHhhHhHHHHHHhHHHHHHHHHHHHhhhccccccchhHHHHHHHHHHhhhhhHHhhhcccccCC
Q 001008 903 FRFLERLLLVHGHWCYRRISMMICYFFYKNLTFGFTLFWYEAYASFSGRPAYNDWYMSCYNVFFTSLPVIALGVFDQDVS 982 (1191)
Q Consensus 903 f~~l~~lll~~GR~~~~~i~~~i~~~~~~n~~~~~~~~~~~~~~~~s~~~~~~~~~~l~~n~~~~~~p~~~l~~~~~d~~ 982 (1191)
.+....+ +++||..+......++|+-.+. +++|...++..+.+ ..+.+.|.++++++....-+++++.++ +.
T Consensus 895 I~cVp~v-IrEGRaALVTSf~~FkYMalYs----~iqFisv~~LY~~~-~nl~D~Qfl~iDLlii~pia~~m~~~~--a~ 966 (1140)
T KOG0208|consen 895 ISCVPDV-IREGRAALVTSFACFKYMALYS----AIQFISVVFLYLIN-SNLGDLQFLFIDLLIITPIAVMMSRFD--AS 966 (1140)
T ss_pred hhhHhHH-HhhhhhhhhhhHHHHHHHHHHH----HHHHHhhheeeeec-ccccchhhhhhHHHHHHHHHHHHccCc--HH
Confidence 5556666 8999999988888888874443 33333333322222 447889999999998766666666654 33
Q ss_pred hhhhhcCccchhccccCCccchhhHHHhhHhHHHHHHHHHHHHHhhh
Q 001008 983 ARLCLKYPLLYQEGVQNILFSWPRILGWMSNGVLSAIIIFFFTTNSI 1029 (1191)
Q Consensus 983 ~~~~~~~P~ly~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 1029 (1191)
++..-.+ |...+++++.+...+++.++..++-+..++..-
T Consensus 967 ~~L~~~r-------P~~~L~s~~~~~~l~~q~vli~l~q~i~~l~~~ 1006 (1140)
T KOG0208|consen 967 DKLFPKR-------PPTNLLSKKILVPLLLQIVLICLVQWILTLIVE 1006 (1140)
T ss_pred HHhcCCC-------CCccccccchhhhhHHHHHHHHHHHHhhheeec
Confidence 3333233 356788888888888877777777776665543
No 19
>KOG0203 consensus Na+/K+ ATPase, alpha subunit [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.7e-91 Score=802.01 Aligned_cols=880 Identities=18% Similarity=0.210 Sum_probs=671.7
Q ss_pred cccccCCCCceeecCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHhccc--C--Cc-----CCCchhhHHHHHHHHHHHH
Q 001008 49 EVVQLNYRGNYVSTTKYTAANFIPKSLFEQFRRVANIYFLVVAFVSFSP--L--AP-----YSAPSVLAPLIVVIGATMA 119 (1191)
Q Consensus 49 ~~~~~~~g~N~i~~~k~~~~~flp~~l~~qf~~~~n~~fl~~~il~~~~--~--~~-----~~~~~~~~~l~~vl~~~~i 119 (1191)
.+++.+-|+|..+.+|.+.-+ ..+.+|+...+.+.+++.++++++. + +. .+.....+.|..+++++.+
T Consensus 65 ~~~L~rdG~NaL~Ppk~t~~w---ikf~kq~f~~~~ill~~~a~l~~~~y~~~~s~~~~~~~~nly~giiL~~vv~vtg~ 141 (1019)
T KOG0203|consen 65 AEKLARDGPNALTPPKTTPEW---IKFLRQLFGGFSILLWIGAILCFVAYGIQASTEDDPSDDNLYLGIVLAAVVIVTGL 141 (1019)
T ss_pred HhhhccCCCCCCCCCCCChHH---HHHHHHHhhhHHHHHHHHHHHHHHHHhhhcccCCCCCCcceEEEEEEEEEEEEEec
Confidence 356888999999999987732 5688999999999999999998875 1 11 1122334445666667777
Q ss_pred HHHHHHHHHhhh---HHHHhcceEEEEecCCeEEEEeccccccccEEEEeCCCcccceEEEEeeeCCCceEEEEeccCCc
Q 001008 120 KEGVEDWRRRKQ---DIEANNRKVKVYGQDHTFVETKWKNLRVGDLVKVHKDEYFPADLLLLSSIYEDGICYVETMNLDG 196 (1191)
Q Consensus 120 ~~~~~d~~r~k~---~~~~n~~~~~V~r~~g~~~~i~~~~L~vGDIV~l~~ge~iPaD~~lL~ss~~~g~~~Vd~s~LtG 196 (1191)
-.++++.+..+- -+.+-+..++|+| ||+...+..++|+|||+|.++-|++||||++++++.+ |+||+|+|||
T Consensus 142 ~~~~qe~ks~~im~sF~~l~P~~~~ViR-dg~k~~i~~eelVvGD~v~vk~GdrVPADiRiis~~g----~~vdnsslTG 216 (1019)
T KOG0203|consen 142 FSYYQEAKSSKIMDSFKNLVPQQALVIR-DGEKMTINAEELVVGDLVEVKGGDRVPADIRIISATG----CKVDNSSLTG 216 (1019)
T ss_pred CCCccchhhHHHHHHHhccchhhheeee-cceeEEechhhcccccceeeccCCcccceeEEEEecc----eeEecccccc
Confidence 666665554433 3444589999999 9999999999999999999999999999999999988 9999999999
Q ss_pred ccccEeecchhhhcccCChhhhcccceEEEeecCCCCceeeEEEEEEcCeeeccCCCceeecCcEeecCCeEEEEEEEec
Q 001008 197 ETNLKLKRSLEATNHLRDEESFQKFTAVIKCEDPNERLYSFVGTLQYEGKQYPLSPQQILLRDSKLKNTDYVYGVVVFTG 276 (1191)
Q Consensus 197 Es~~~~K~~~~~~~~~~~~~~~~~~~~~i~~e~pn~~~~~f~Gt~~~~g~~~~l~~~n~l~rgs~l~nt~~~~gvVv~tG 276 (1191)
||.|..+.+.....+..+..| ..|.+|..++|. ++|+|++||
T Consensus 217 esEP~~~~~~~t~~~~~Et~N-----------------i~f~st~~veG~---------------------~~givi~tG 258 (1019)
T KOG0203|consen 217 ESEPQTRSPEFTHENPLETRN-----------------IAFFSTNCVEGT---------------------GRGIVIATG 258 (1019)
T ss_pred ccCCccCCccccccCchhhee-----------------eeeeeeEEecce---------------------EEEEEEecC
Confidence 999999987543322111111 448899999998 999999999
Q ss_pred chhhHhhc---cCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcccccCCCccccccccCCCCCcccCCCCc
Q 001008 277 HDTKVMQN---ATDPPSKRSKIERKMDKIVYLLFSTLILISSTGSVFFGIETKRDIDGGKIRRWYLQPDDATVFYDPRRA 353 (1191)
Q Consensus 277 ~~Tki~~~---~~~~~~k~s~l~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 353 (1191)
.+|.+++. .......++|+++++++++.++....+++++..+++.... ++ .
T Consensus 259 d~Tv~G~ia~l~~~~~~~~t~~~~ei~~fi~~it~vAi~~~i~fF~~~~~~-gy--------~----------------- 312 (1019)
T KOG0203|consen 259 DRTVMGRIASLASGLEDGKTPIAKEIEHFIHIITGVAIFLGISFFILALIL-GY--------E----------------- 312 (1019)
T ss_pred CceEEeehhhhhccCCCCCCcchhhhhchHHHHHHHHHHHHHHHHHHHHhh-cc--------h-----------------
Confidence 99976443 3345677899999999999999888777776665554333 11 1
Q ss_pred hhHHHHHHHHHHHHhhccccchhhhHHHHHHHHHHHHHhhcccccccCCCCCccccCccccccccceeEEEecCCCcccc
Q 001008 354 PLAAFLHFLTGLMLYGYLIPISLYISIEIVKVLQSVFINHDRDMYYEDTDKPARARTSNLNEELGQVDTILSDKTGTLTC 433 (1191)
Q Consensus 354 ~~~~~~~~~~~i~ll~~~iP~sL~v~~~~~~~~~~~~i~~d~~m~~~~~~~~~~v~~~~~~e~Lg~v~~i~~DKTGTLT~ 433 (1191)
++..+...++++++.+|.+|+++++......+.+| +++++++|++.++|+||+..+||+|||||||+
T Consensus 313 ---~l~avv~~i~iivAnvPeGL~~tvTv~LtltakrM----------a~Knc~vknLeavetlGsts~I~SDktGTlTq 379 (1019)
T KOG0203|consen 313 ---WLRAVVFLIGIIVANVPEGLLATVTVCLTLTAKRM----------ARKNCLVKNLEAVETLGSTSTICSDKTGTLTQ 379 (1019)
T ss_pred ---hHHHhhhhheeEEecCcCCccceehhhHHHHHHHH----------hhceeEEeeeeheeecccceeEeecceeeEEe
Confidence 23356668899999999999999999999999988 89999999999999999999999999999999
Q ss_pred ceeEEEEEEEcCeeeccchhHHHHHHHHhhCCcccccCCCCCCCCCCCCccccCCCccCCcccCChhhhcccCCCCCChH
Q 001008 434 NSMEFVKCSVAGVAYGRVMTEVERTLAKRKGERTFEVDDSQTDAPGLNGNIVESGKSVKGFNFRDERIMNGQWVNEPHSD 513 (1191)
Q Consensus 434 n~m~~~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 513 (1191)
|.|+|.++|.++.....+..+. +.+. . ....+.
T Consensus 380 nrMtVahlw~d~~i~~~d~~~~------~~~~-----------------------------~------------~~~~~~ 412 (1019)
T KOG0203|consen 380 NRMTVAHLWFDNQIHEADTTED------QSGQ-----------------------------S------------FDKSSA 412 (1019)
T ss_pred cceEEEeeccCCceeeeechhh------hhcc-----------------------------c------------ccccCc
Confidence 9999999998876543322110 0000 0 001234
Q ss_pred HHHHHHHHHhhhccceeccCCCCC--ceEEecCCccHHHHHHHHHHcCcEEEeecCCeeEEEecCCCCccccceEEEEeE
Q 001008 514 VIQKFFRVLAICHTAIPDVNEETG--EISYEAESPDEAAFVIAAREVGFQFFGSSQTSISLHELDPVSGQKVNRVYELLH 591 (1191)
Q Consensus 514 ~~~~~~~~lalC~~~~~~~~~~~~--~~~y~~~sp~e~Alv~~a~~~g~~~~~~~~~~~~i~~~~~~~~~~~~~~~~il~ 591 (1191)
....+.++..+||.+.....+..- .-.-..+++.|.||++++.-.-... ...++.++.+.
T Consensus 413 ~~~~l~r~~~lCn~a~~~~gq~dvPv~kk~v~G~~se~ALlk~~e~~~~~~------------------~~~R~~~~kv~ 474 (1019)
T KOG0203|consen 413 TFIALSRIATLCNRAVFKPGQDDVPVLKRDVAGDASEVALLKFIELILGSV------------------MELRERNPKVA 474 (1019)
T ss_pred hHHHHHHHHHHhCcceecccccCCceeeeeccCCHHHHHHHHHHHHhcchH------------------HHHHHhhHHhh
Confidence 567889999999999886443211 1223458999999999987532211 11266788899
Q ss_pred eecccCCCceEEEEEEcCC---CcEEEEEeccchHHHHHHhhc---------ChhhHHHHHHHHHHHHhccceEEEEEEE
Q 001008 592 VLEFTSSRKRMSVMVRNPE---NQLLLLCKGADSVMFERLSKH---------GQQFEAETRRHINRYAEAGLRTLVIAYR 659 (1191)
Q Consensus 592 ~~~F~s~rkrmsviv~~~~---~~~~l~~KGa~~~i~~~~~~~---------~~~~~~~~~~~l~~~a~~GlR~L~~A~r 659 (1191)
.+||+|.+|..-.+.+.+| .+..+.+|||||.++++|+.. ++...+.+.+...++...|-||+.||++
T Consensus 475 eipfNSt~Kyqlsih~~~d~~~~~~~l~mKGape~il~~CSTi~i~g~e~pld~~~~~~f~~ay~~lg~~GerVlgF~~~ 554 (1019)
T KOG0203|consen 475 EIPFNSTNKYQLSIHETEDPSDPRFLLVMKGAPERILDRCSTILINGEEKPLDEKLKEAFQEAYLELGGLGERVLGFCDL 554 (1019)
T ss_pred cCCcccccceEEEEEecCCCCCccceeeecCChHHHHhhccceeecCCCCCcCHHHHHHHHHHHHHhhhcchHHHHHHHH
Confidence 9999999999999998765 578999999999999999863 3456677888888999999999999999
Q ss_pred ecCHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHHhhccceEEEeeeecccccCCcHHHHHHHHHcCCeEEEEeCCCHhh
Q 001008 660 ELGEDEYRIWEKEFLKAKTSVTSDREALVASAAEKIERDLILLGATAVEDKLQKGVPECIDKLAQAGIKVWVLTGDKMET 739 (1191)
Q Consensus 660 ~l~~~~~~~~~~~~~~a~~~l~~~r~~~~~~~~~~iE~dl~llG~~~ieD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~t 739 (1191)
.+++++|.+...-.-+.. +.--.++.|+|++++-||+|..+|+++..||.|||||.|+|||++.|
T Consensus 555 ~l~~~~~p~~~~f~~d~~---------------n~p~~nl~FlGl~s~idPPR~~vP~Av~~CrsAGIkvimVTgdhpiT 619 (1019)
T KOG0203|consen 555 ELPDEKFPRGFQFDTDDV---------------NFPTDNLRFLGLISMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPIT 619 (1019)
T ss_pred hcchhcCCCceEeecCCC---------------CCcchhccccchhhccCCCcccCchhhhhhhhhCceEEEEecCccch
Confidence 999887654321110000 11125899999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCccccCceEEEEecCCchhhhhhhhcchHHHHHHHHHHHHHHHHhhcccccccccccceeEEEEeCchhhHH
Q 001008 740 AINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQIREGISQVNSAKESKVTFGLVIDGKSLDFA 819 (1191)
Q Consensus 740 a~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~ 819 (1191)
|.+||++.||+.+...... .+...++...+ ..++....+.|+.|.+|..+
T Consensus 620 AkAiA~~vgIi~~~~et~e--------------------------~~a~r~~~~v~----~vn~~~a~a~VihG~eL~~~ 669 (1019)
T KOG0203|consen 620 AKAIAKSVGIISEGSETVE--------------------------DIAKRLNIPVE----QVNSRDAKAAVIHGSELPDM 669 (1019)
T ss_pred hhhhhhheeeecCCchhhh--------------------------hhHHhcCCccc----ccCccccceEEEeccccccc
Confidence 9999999999876533210 00111111111 11233457899999999877
Q ss_pred hHHHHHHHHHHHHhhcCceEEEcCChhhHHHHHHHhhcCCCEEEEEcCCccChHhhhhcceeEEe--ccCccchhhhccc
Q 001008 820 LDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLVKGTGKTTLAIGDGANDVGMLQEADIGVGI--SGVEGMQAVMSSD 897 (1191)
Q Consensus 820 ~~~~~~~~~~~l~~~~~~~v~~r~sP~qK~~iV~~l~~~g~~vl~iGDG~ND~~ml~~AdvGI~i--~g~e~~~a~~~aD 897 (1191)
-.+++.+.+ ....-.||||.||+||..||+..|+.|.+|+.+|||.||+|||+.||||||| +|++. ++++||
T Consensus 670 ~~~qld~il----~nh~eIVFARTSPqQKLiIVe~cQr~GaiVaVTGDGVNDsPALKKADIGVAMGiaGSDv--sKqAAD 743 (1019)
T KOG0203|consen 670 SSEQLDELL----QNHQEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDV--SKQAAD 743 (1019)
T ss_pred CHHHHHHHH----HhCCceEEEecCccceEEeEhhhhhcCcEEEEeCCCcCCChhhcccccceeeccccchH--HHhhcc
Confidence 665554444 4556689999999999999999999999999999999999999999999976 78887 899999
Q ss_pred eeccchhh--hhHhhhhhchhhhhHhhHhHHHHHHhHHHHHHHHHHHHhhhccccccchhHHHHHHHHHHhhhhhHHhhh
Q 001008 898 YAIAQFRF--LERLLLVHGHWCYRRISMMICYFFYKNLTFGFTLFWYEAYASFSGRPAYNDWYMSCYNVFFTSLPVIALG 975 (1191)
Q Consensus 898 ~vl~~f~~--l~~lll~~GR~~~~~i~~~i~~~~~~n~~~~~~~~~~~~~~~~s~~~~~~~~~~l~~n~~~~~~p~~~l~ 975 (1191)
++++|+++ ++.- +.+||.+|+|+++.|.|.+..|+..+.+.++|.++. -+.++..+++|.+++..++.|++.++
T Consensus 744 mILLDDNFASIVtG-VEEGRLiFDNLKKsIAYTLTsNipEI~PfL~fi~~g---iPLplgtitIL~IDLgTDmvPAiSLA 819 (1019)
T KOG0203|consen 744 MILLDDNFASIVTG-VEEGRLIFDNLKKSIAYTLTSNIPEITPFLLFILFG---IPLPLGTVTILCIDLGTDIVPAISLA 819 (1019)
T ss_pred eEEecCcchhheee-cccceehhhhHHHHHHHHHHhcchhHhHHHHHHHhC---CCcccchhhhhhhHhhcccchhhhHh
Confidence 99999655 7777 899999999999999999999999999988887773 22348899999999999999999999
Q ss_pred cccccCChhhhhcCccchhccccCCccchhhH-HHhhHhHHHHHHHHHHHHHhhhccccc--------------------
Q 001008 976 VFDQDVSARLCLKYPLLYQEGVQNILFSWPRI-LGWMSNGVLSAIIIFFFTTNSIFNQAF-------------------- 1034 (1191)
Q Consensus 976 ~~~~d~~~~~~~~~P~ly~~~~~~~~~~~~~~-~~~~~~~~~~~~v~~~~~~~~~~~~~~-------------------- 1034 (1191)
++. +..+.|.+.|+ ....+++.|.+.+ ..++..|.+|++..|+.++..+....|
T Consensus 820 YE~--aEsDIM~r~PR---~p~~D~LVN~rLi~~aY~qIG~iqa~agF~tYFvima~nGf~P~~L~~ir~~W~d~~~~Dl 894 (1019)
T KOG0203|consen 820 YEK--AESDIMLRPPR---NPKDDKLVNKRLISYSYLQIGMIQALAGFFTYFVIMAENGFLPRTLVGLREDWDDDGVNDL 894 (1019)
T ss_pred ccC--chhhHHhcCCC---CCcccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHhhHHhhhhhhhhhh
Confidence 864 44555556666 3356788888775 557788999999999888876644333
Q ss_pred -cCCCcceeh-------hhhhhHHhhHHHHHHHHHHHhh-hccchh----hHHHHHHHHHHHHHHHHHHHhcCCCCCcch
Q 001008 1035 -RKDGHAVDY-------EVLGVAMYSSVVWAVNCQMALS-INYFTW----IQHFFIWGSIALWYIFLVVYGSLPPTFSTT 1101 (1191)
Q Consensus 1035 -~~~g~~~~~-------~~~~~~~f~~~v~~~~~~~~l~-~~~~~~----~~~~~i~~si~~~~i~~~i~~~~~~~~~~~ 1101 (1191)
.+.|....+ +...+..|.++++.+...+++. ++.-+. +.|..++++++.-.++..+++|.|.. .
T Consensus 895 ~DsyGQeWtyeqRk~le~tc~taFfvsIvV~Q~adLii~KTRRnSlfqqGmrN~vl~f~v~~e~~La~fl~y~pg~-~-- 971 (1019)
T KOG0203|consen 895 TDSYGQEWTYEQRKYLEYTCYTAFFISIVVVQWADLIICKTRRNSIFQQGMRNKVLIFAVIFETCLACFLCYCPGV-L-- 971 (1019)
T ss_pred hhhccccccHHHHHHHHHhhhhheeeeehHHhHhhHHhhhcchhHHHHhhhhhhhHHHHHHHHHHHHHHHhcCccH-H--
Confidence 122322221 2334555556666665555443 222232 46667888888888888889999862 2
Q ss_pred hHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Q 001008 1102 AYKVLVEACAPSILYWLTTLLVVVSTLLPYFLYRAFQTRFRPM 1144 (1191)
Q Consensus 1102 ~~~~~~~~~~~s~~~wl~~l~~~~~~ll~~~i~k~~~~~~~P~ 1144 (1191)
..++..++-+.+|+.-+...+..++.+++.|++.|.|--.
T Consensus 972 ---~~l~~~pl~~~~wl~a~P~~ilIfvydE~Rk~~IR~~P~g 1011 (1019)
T KOG0203|consen 972 ---YALGMYPLKFQWWLVAFPFGILIFVYDEVRKLFIRRYPGG 1011 (1019)
T ss_pred ---HHhccCCCCcEEEEecccceeeeeeHHHHHhHhhhhCCCc
Confidence 2566778888999999999999999999999999876443
No 20
>PRK14010 potassium-transporting ATPase subunit B; Provisional
Probab=100.00 E-value=1.7e-75 Score=704.19 Aligned_cols=583 Identities=17% Similarity=0.202 Sum_probs=436.6
Q ss_pred HHHHHHHHHHHHHHHHHhccc--CCc----CCC-chhhHHHHHHH----HHHHHHHHHHHHHHhhhHHHHh---cc-eEE
Q 001008 77 EQFRRVANIYFLVVAFVSFSP--LAP----YSA-PSVLAPLIVVI----GATMAKEGVEDWRRRKQDIEAN---NR-KVK 141 (1191)
Q Consensus 77 ~qf~~~~n~~fl~~~il~~~~--~~~----~~~-~~~~~~l~~vl----~~~~i~~~~~d~~r~k~~~~~n---~~-~~~ 141 (1191)
.+|++|..+.++++++++++. +.. .++ ....+.+++++ +++.+.|.+.++|..++.+.+. +. +++
T Consensus 28 ~~~~~p~~~il~~aa~ls~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~g~~~E~~ae~ra~~~~~~L~~~~~~~~a~ 107 (673)
T PRK14010 28 YMIKNPIMFVVEVGMLLALGLTIYPDLFHQESVSRLYVFSIFIILLLTLVFANFSEALAEGRGKAQANALRQTQTEMKAR 107 (673)
T ss_pred HHHHChHHHHHHHHHHHHHHHHHHhhhcccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcceEE
Confidence 478899999999999988864 111 011 01122222333 3333444444666665554444 33 575
Q ss_pred -EEecCCeEEEEeccccccccEEEEeCCCcccceEEEEeeeCCCceEEEEeccCCcccccEeecchhhhcccCChhhhcc
Q 001008 142 -VYGQDHTFVETKWKNLRVGDLVKVHKDEYFPADLLLLSSIYEDGICYVETMNLDGETNLKLKRSLEATNHLRDEESFQK 220 (1191)
Q Consensus 142 -V~r~~g~~~~i~~~~L~vGDIV~l~~ge~iPaD~~lL~ss~~~g~~~Vd~s~LtGEs~~~~K~~~~~~~~~~~~~~~~~ 220 (1191)
|.| ||++++|+.++|+|||+|.|++||.|||||++++ |.+.||||+|||||.|+.|.++.+.
T Consensus 108 ~v~r-dg~~~~I~a~eLv~GDiV~v~~Gd~IPaDG~vie-----G~~~VDESaLTGES~PV~K~~g~d~----------- 170 (673)
T PRK14010 108 RIKQ-DGSYEMIDASDLKKGHIVRVATGEQIPNDGKVIK-----GLATVDESAITGESAPVIKESGGDF----------- 170 (673)
T ss_pred EEEe-CCEEEEEEHHHcCCCCEEEECCCCcccCCeEEEE-----cceEEecchhcCCCCceeccCCCcc-----------
Confidence 667 9999999999999999999999999999999999 5589999999999999999986211
Q ss_pred cceEEEeecCCCCceeeEEEEEEcCeeeccCCCceeecCcEeecCCeEEEEEEEecchhhH---hhccCCCCCCCCHHHH
Q 001008 221 FTAVIKCEDPNERLYSFVGTLQYEGKQYPLSPQQILLRDSKLKNTDYVYGVVVFTGHDTKV---MQNATDPPSKRSKIER 297 (1191)
Q Consensus 221 ~~~~i~~e~pn~~~~~f~Gt~~~~g~~~~l~~~n~l~rgs~l~nt~~~~gvVv~tG~~Tki---~~~~~~~~~k~s~l~~ 297 (1191)
-..|+||.+.+|. +.++|+.||.+|.+ ....+.++.+++|+|.
T Consensus 171 -------------~~V~aGT~v~~G~---------------------~~i~Vta~g~~T~lgki~~lve~a~~~ktp~e~ 216 (673)
T PRK14010 171 -------------DNVIGGTSVASDW---------------------LEVEITSEPGHSFLDKMIGLVEGATRKKTPNEI 216 (673)
T ss_pred -------------CeeecCceeecce---------------------EEEEEEEecccCHHHHHHHHHhhccccCCHHHH
Confidence 0249999999988 99999999999954 5556677778899998
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhhcccccCCCccccccccCCCCCcccCCCCchhHHHHHHHHHHHHhhccccchhh
Q 001008 298 KMDKIVYLLFSTLILISSTGSVFFGIETKRDIDGGKIRRWYLQPDDATVFYDPRRAPLAAFLHFLTGLMLYGYLIPISLY 377 (1191)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ll~~~iP~sL~ 377 (1191)
.++.+...++++.++++ .++.. +.. |. .....+...+.+++.+||++|+
T Consensus 217 ~l~~l~~~l~ii~l~~~--~~~~~-~~~------------~~----------------~~~~~~~~~val~V~~IP~aL~ 265 (673)
T PRK14010 217 ALFTLLMTLTIIFLVVI--LTMYP-LAK------------FL----------------NFNLSIAMLIALAVCLIPTTIG 265 (673)
T ss_pred HHHHHHHHHhHHHHHHH--HHHHH-HHh------------hc----------------cHHHHHHHHHHHHHHhhhhhHH
Confidence 87766544432222111 11110 000 00 0111445566667778999999
Q ss_pred hHHHHHHHHHHHHHhhcccccccCCCCCccccCccccccccceeEEEecCCCccccceeEEEEEEEcCeeeccchhHHHH
Q 001008 378 ISIEIVKVLQSVFINHDRDMYYEDTDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFVKCSVAGVAYGRVMTEVER 457 (1191)
Q Consensus 378 v~~~~~~~~~~~~i~~d~~m~~~~~~~~~~v~~~~~~e~Lg~v~~i~~DKTGTLT~n~m~~~~~~i~~~~y~~~~~~~~~ 457 (1191)
..++++...++.++ +++++++|+.+.+|.||++|++|||||||||+|++.+..+...+.
T Consensus 266 ~~~~~~~~~g~~r~----------ak~gvLvk~~~avE~lg~v~vI~~DKTGTLT~Gn~~~~~~~~~~~----------- 324 (673)
T PRK14010 266 GLLSAIGIAGMDRV----------TQFNILAKSGRSVETCGDVNVLILDKTGTITYGNRMADAFIPVKS----------- 324 (673)
T ss_pred HHHHHHHHHHHHHH----------hhCCEEEeCcHHHHHhhCCCEEEEeCCCcCCCCCeEEEEEEeCCC-----------
Confidence 99998888888877 899999999999999999999999999999997766655421100
Q ss_pred HHHHhhCCcccccCCCCCCCCCCCCccccCCCccCCcccCChhhhcccCCCCCChHHHHHHHHHHhhhccceeccCCCCC
Q 001008 458 TLAKRKGERTFEVDDSQTDAPGLNGNIVESGKSVKGFNFRDERIMNGQWVNEPHSDVIQKFFRVLAICHTAIPDVNEETG 537 (1191)
Q Consensus 458 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~lalC~~~~~~~~~~~~ 537 (1191)
...++++...++|+..
T Consensus 325 -------------------------------------------------------~~~~~ll~~a~~~~~~--------- 340 (673)
T PRK14010 325 -------------------------------------------------------SSFERLVKAAYESSIA--------- 340 (673)
T ss_pred -------------------------------------------------------ccHHHHHHHHHHhcCC---------
Confidence 0123455666677532
Q ss_pred ceEEecCCccHHHHHHHHHHcCcEEEeecCCeeEEEecCCCCccccceEEEEeEeecccCCCceEEEEEEcCCCcEEEEE
Q 001008 538 EISYEAESPDEAAFVIAAREVGFQFFGSSQTSISLHELDPVSGQKVNRVYELLHVLEFTSSRKRMSVMVRNPENQLLLLC 617 (1191)
Q Consensus 538 ~~~y~~~sp~e~Alv~~a~~~g~~~~~~~~~~~~i~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~ 617 (1191)
+.||.+.|+++++++.|+.... .....+||++++|+|++.++ ++ .+.
T Consensus 341 -----s~~P~~~AIv~~a~~~~~~~~~-----------------------~~~~~~pF~~~~k~~gv~~~---g~--~i~ 387 (673)
T PRK14010 341 -----DDTPEGRSIVKLAYKQHIDLPQ-----------------------EVGEYIPFTAETRMSGVKFT---TR--EVY 387 (673)
T ss_pred -----CCChHHHHHHHHHHHcCCCchh-----------------------hhcceeccccccceeEEEEC---CE--EEE
Confidence 2599999999999887653210 01123799999999999753 33 455
Q ss_pred eccchHHHHHHhhcChhhHHHHHHHHHHHHhccceEEEEEEEecCHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHHhhc
Q 001008 618 KGADSVMFERLSKHGQQFEAETRRHINRYAEAGLRTLVIAYRELGEDEYRIWEKEFLKAKTSVTSDREALVASAAEKIER 697 (1191)
Q Consensus 618 KGa~~~i~~~~~~~~~~~~~~~~~~l~~~a~~GlR~L~~A~r~l~~~~~~~~~~~~~~a~~~l~~~r~~~~~~~~~~iE~ 697 (1191)
|||++.++++|...+...+.++.+..++++++|+|+++++ .
T Consensus 388 kGa~~~il~~~~~~g~~~~~~~~~~~~~~a~~G~~~l~v~---------------------------------------~ 428 (673)
T PRK14010 388 KGAPNSMVKRVKEAGGHIPVDLDALVKGVSKKGGTPLVVL---------------------------------------E 428 (673)
T ss_pred ECCHHHHHHHhhhcCCCCchHHHHHHHHHHhCCCeEEEEE---------------------------------------E
Confidence 9999999999986543344456677788999999999987 4
Q ss_pred cceEEEeeeecccccCCcHHHHHHHHHcCCeEEEEeCCCHhhHHHHHHHcCccccCceEEEEecCCchhhhhhhhcchHH
Q 001008 698 DLILLGATAVEDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKEN 777 (1191)
Q Consensus 698 dl~llG~~~ieD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 777 (1191)
|++++|+++++|++|+|++++|++||++||+++|+|||+..||.+||+++|+.
T Consensus 429 ~~~~lG~i~l~Dp~R~~a~e~I~~Lr~~GI~vvMiTGDn~~TA~aIA~elGI~--------------------------- 481 (673)
T PRK14010 429 DNEILGVIYLKDVIKDGLVERFRELREMGIETVMCTGDNELTAATIAKEAGVD--------------------------- 481 (673)
T ss_pred CCEEEEEEEeecCCcHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCc---------------------------
Confidence 78999999999999999999999999999999999999999999999999993
Q ss_pred HHHHHHHHHHHHHHhhcccccccccccceeEEEEeCchhhHHhHHHHHHHHHHHHhhcCceEEEcCChhhHHHHHHHhhc
Q 001008 778 ITKVSLESVTKQIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLVKG 857 (1191)
Q Consensus 778 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~l~~~~~~~v~~r~sP~qK~~iV~~l~~ 857 (1191)
.+++|++|+||.++|+.+|+
T Consensus 482 ------------------------------------------------------------~v~A~~~PedK~~iV~~lQ~ 501 (673)
T PRK14010 482 ------------------------------------------------------------RFVAECKPEDKINVIREEQA 501 (673)
T ss_pred ------------------------------------------------------------eEEcCCCHHHHHHHHHHHHh
Confidence 18999999999999999999
Q ss_pred CCCEEEEEcCCccChHhhhhcceeEEe-ccCccchhhhccceeccc--hhhhhHhhhhhchhhhhHhhHhHHHHHHhHHH
Q 001008 858 TGKTTLAIGDGANDVGMLQEADIGVGI-SGVEGMQAVMSSDYAIAQ--FRFLERLLLVHGHWCYRRISMMICYFFYKNLT 934 (1191)
Q Consensus 858 ~g~~vl~iGDG~ND~~ml~~AdvGI~i-~g~e~~~a~~~aD~vl~~--f~~l~~lll~~GR~~~~~i~~~i~~~~~~n~~ 934 (1191)
.|++|+|+|||.||+|+|++|||||+| +|++. |+++||+++++ |..+..+ +.+||..|.|+++++.|.+..|+.
T Consensus 502 ~G~~VaMtGDGvNDAPALa~ADVGIAMgsGTdv--AkeAADiVLldd~ls~Iv~a-v~~gR~i~~n~~~~~~f~~~~~~~ 578 (673)
T PRK14010 502 KGHIVAMTGDGTNDAPALAEANVGLAMNSGTMS--AKEAANLIDLDSNPTKLMEV-VLIGKQLLMTRGSLTTFSIANDIA 578 (673)
T ss_pred CCCEEEEECCChhhHHHHHhCCEEEEeCCCCHH--HHHhCCEEEcCCCHHHHHHH-HHHHHHHHHHHHHHHheeeeccHH
Confidence 999999999999999999999999999 45555 89999999998 5558888 899999999999999999999999
Q ss_pred HHHHHHHHHhhhccccccchhHH----------HHHHHHHHhh--hhhHHhhhcccccCChhhhhc
Q 001008 935 FGFTLFWYEAYASFSGRPAYNDW----------YMSCYNVFFT--SLPVIALGVFDQDVSARLCLK 988 (1191)
Q Consensus 935 ~~~~~~~~~~~~~~s~~~~~~~~----------~~l~~n~~~~--~~p~~~l~~~~~d~~~~~~~~ 988 (1191)
..+..+...|...+.+...++.+ .-+.||-+.. .+|.-.-|+..++.+...+++
T Consensus 579 ~~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 644 (673)
T PRK14010 579 KYFAILPAMFMAAMPAMNHLNIMHLHSPESAVLSALIFNALIIVLLIPIAMKGVKFKGASTQTILM 644 (673)
T ss_pred HHHHHHHHHHHHhcccchhhccccCCChHHHHHHHHHHHHHHHHHHHHHHhcCcccccCCHHHHHh
Confidence 98887776655443332222221 2245555432 234444455556666655544
No 21
>PRK01122 potassium-transporting ATPase subunit B; Provisional
Probab=100.00 E-value=1.6e-74 Score=696.47 Aligned_cols=592 Identities=20% Similarity=0.207 Sum_probs=449.2
Q ss_pred HHHHHHHHHHHHHHHHHHhccc-CCc------CCC---chhhHHHHHHHHHHHHHHHHHHHHHhhhHHHHh---cc-eEE
Q 001008 76 FEQFRRVANIYFLVVAFVSFSP-LAP------YSA---PSVLAPLIVVIGATMAKEGVEDWRRRKQDIEAN---NR-KVK 141 (1191)
Q Consensus 76 ~~qf~~~~n~~fl~~~il~~~~-~~~------~~~---~~~~~~l~~vl~~~~i~~~~~d~~r~k~~~~~n---~~-~~~ 141 (1191)
-.||++|..+.+++.++++++. +.+ ..+ +...+.+++.++++...|.+.++|..++.+.+. +. +++
T Consensus 28 ~~~~~~p~~~vl~~~a~ls~~~~~~~~~~~~~~~~~~~~~i~~~l~~~vl~~~~~e~~ae~ra~~~~~sL~~l~~~~~a~ 107 (679)
T PRK01122 28 RVQIRNPVMFVVEVGSILTTILTIAPLLFQSGGPAGFNLAITLWLWFTVLFANFAEALAEGRGKAQADSLRGAKKDTFAR 107 (679)
T ss_pred HHHhhChHHHHHHHHHHHHHHHHhhhhccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCeEE
Confidence 3589999999999999998874 111 011 222244455555666677778877777755554 33 699
Q ss_pred EEecCCe-EEEEeccccccccEEEEeCCCcccceEEEEeeeCCCceEEEEeccCCcccccEeecchhhhcccCChhhhcc
Q 001008 142 VYGQDHT-FVETKWKNLRVGDLVKVHKDEYFPADLLLLSSIYEDGICYVETMNLDGETNLKLKRSLEATNHLRDEESFQK 220 (1191)
Q Consensus 142 V~r~~g~-~~~i~~~~L~vGDIV~l~~ge~iPaD~~lL~ss~~~g~~~Vd~s~LtGEs~~~~K~~~~~~~~~~~~~~~~~ 220 (1191)
|+| ||+ +++|++++|++||+|.|++||.|||||++++ |.+.||||.|||||.|+.|.+++..
T Consensus 108 vir-~g~~~~~V~~~eL~~GDiV~v~~Gd~IPaDG~vie-----G~a~VDESaLTGES~PV~K~~G~~~----------- 170 (679)
T PRK01122 108 KLR-EPGAAEEVPATELRKGDIVLVEAGEIIPADGEVIE-----GVASVDESAITGESAPVIRESGGDF----------- 170 (679)
T ss_pred EEE-CCCEEEEEEHHHcCCCCEEEEcCCCEEEEEEEEEE-----ccEEEEcccccCCCCceEeCCCCcc-----------
Confidence 999 887 9999999999999999999999999999999 5589999999999999999986531
Q ss_pred cceEEEeecCCCCceeeEEEEEEcCeeeccCCCceeecCcEeecCCeEEEEEEEecchhhH---hhccCCCCCCCCHHHH
Q 001008 221 FTAVIKCEDPNERLYSFVGTLQYEGKQYPLSPQQILLRDSKLKNTDYVYGVVVFTGHDTKV---MQNATDPPSKRSKIER 297 (1191)
Q Consensus 221 ~~~~i~~e~pn~~~~~f~Gt~~~~g~~~~l~~~n~l~rgs~l~nt~~~~gvVv~tG~~Tki---~~~~~~~~~k~s~l~~ 297 (1191)
...|+||.+.+|. +.+.|+.+|.+|.+ ....+.++.+++|+|+
T Consensus 171 -------------~~V~aGT~v~~G~---------------------~~i~Vta~g~~S~lgki~~lve~a~~~ktp~e~ 216 (679)
T PRK01122 171 -------------SSVTGGTRVLSDW---------------------IVIRITANPGESFLDRMIALVEGAKRQKTPNEI 216 (679)
T ss_pred -------------CeEEeceEEEeee---------------------EEEEEEEecccCHHHHHHHHHHhccccCCHHHH
Confidence 1259999999988 99999999999954 4556677777899999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhhcccccCCCccccccccCCCCCcccCCCCchhHHHHHHHHHHHHhhccccchhh
Q 001008 298 KMDKIVYLLFSTLILISSTGSVFFGIETKRDIDGGKIRRWYLQPDDATVFYDPRRAPLAAFLHFLTGLMLYGYLIPISLY 377 (1191)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ll~~~iP~sL~ 377 (1191)
.++.+...++.+.++++++...+ ..+.+ . -..+...+.+++.+||++|+
T Consensus 217 al~~l~~~l~~i~l~~~~~~~~~-~~~~g--------------~----------------~~~l~~~iallV~aiP~alg 265 (679)
T PRK01122 217 ALTILLAGLTIIFLLVVATLPPF-AAYSG--------------G----------------ALSITVLVALLVCLIPTTIG 265 (679)
T ss_pred HHHHHHHhhhHHHHHHHHHHHHH-HHHhC--------------c----------------hHHHHHHHHHHHHcccchhh
Confidence 88887766654444333322211 11110 0 01566778889999999999
Q ss_pred hHHHHHHHHHHHHHhhcccccccCCCCCccccCccccccccceeEEEecCCCccccceeEEEEEEEcCeeeccchhHHHH
Q 001008 378 ISIEIVKVLQSVFINHDRDMYYEDTDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFVKCSVAGVAYGRVMTEVER 457 (1191)
Q Consensus 378 v~~~~~~~~~~~~i~~d~~m~~~~~~~~~~v~~~~~~e~Lg~v~~i~~DKTGTLT~n~m~~~~~~i~~~~y~~~~~~~~~ 457 (1191)
..++++...++.++ .++++++|+...+|.||++|+||||||||||+|+|++.+++..+..
T Consensus 266 ~l~~~i~i~g~~r~----------ak~gvLvk~~~avE~lg~v~~I~~DKTGTLT~g~~~v~~~~~~~~~---------- 325 (679)
T PRK01122 266 GLLSAIGIAGMDRV----------LQANVIATSGRAVEAAGDVDTLLLDKTGTITLGNRQASEFLPVPGV---------- 325 (679)
T ss_pred hHHHHHHHHHHHHH----------hcCCeeecCchHHHHhcCCCEEEEeCCCCCcCCcEEEEEEEeCCCC----------
Confidence 88888887777777 8899999999999999999999999999999999999887531100
Q ss_pred HHHHhhCCcccccCCCCCCCCCCCCccccCCCccCCcccCChhhhcccCCCCCChHHHHHHHHHHhhhccceeccCCCCC
Q 001008 458 TLAKRKGERTFEVDDSQTDAPGLNGNIVESGKSVKGFNFRDERIMNGQWVNEPHSDVIQKFFRVLAICHTAIPDVNEETG 537 (1191)
Q Consensus 458 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~lalC~~~~~~~~~~~~ 537 (1191)
..++++...++|+..
T Consensus 326 --------------------------------------------------------~~~~ll~~a~~~s~~--------- 340 (679)
T PRK01122 326 --------------------------------------------------------TEEELADAAQLSSLA--------- 340 (679)
T ss_pred --------------------------------------------------------CHHHHHHHHHHhcCC---------
Confidence 012355566666443
Q ss_pred ceEEecCCccHHHHHHHHHH-cCcEEEeecCCeeEEEecCCCCccccceEEEEeEeecccCCCceEEEEEEcCCCcEEEE
Q 001008 538 EISYEAESPDEAAFVIAARE-VGFQFFGSSQTSISLHELDPVSGQKVNRVYELLHVLEFTSSRKRMSVMVRNPENQLLLL 616 (1191)
Q Consensus 538 ~~~y~~~sp~e~Alv~~a~~-~g~~~~~~~~~~~~i~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~ 616 (1191)
+.||...|++++|++ .++... ...++..+.+||++.+|+|++.+. | ..|
T Consensus 341 -----s~hP~~~AIv~~a~~~~~~~~~--------------------~~~~~~~~~~pF~s~~~~~gv~~~---g--~~~ 390 (679)
T PRK01122 341 -----DETPEGRSIVVLAKQRFNLRER--------------------DLQSLHATFVPFSAQTRMSGVDLD---G--REI 390 (679)
T ss_pred -----CCCchHHHHHHHHHhhcCCCch--------------------hhccccceeEeecCcCceEEEEEC---C--EEE
Confidence 248999999999986 343210 112455677899999998888653 3 578
Q ss_pred EeccchHHHHHHhhcChhhHHHHHHHHHHHHhccceEEEEEEEecCHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHHhh
Q 001008 617 CKGADSVMFERLSKHGQQFEAETRRHINRYAEAGLRTLVIAYRELGEDEYRIWEKEFLKAKTSVTSDREALVASAAEKIE 696 (1191)
Q Consensus 617 ~KGa~~~i~~~~~~~~~~~~~~~~~~l~~~a~~GlR~L~~A~r~l~~~~~~~~~~~~~~a~~~l~~~r~~~~~~~~~~iE 696 (1191)
+|||++.+++.|...+...++++.+..++++++|+|++++|
T Consensus 391 ~kGa~e~il~~~~~~g~~~~~~~~~~~~~~a~~G~~~l~va--------------------------------------- 431 (679)
T PRK01122 391 RKGAVDAIRRYVESNGGHFPAELDAAVDEVARKGGTPLVVA--------------------------------------- 431 (679)
T ss_pred EECCHHHHHHHHHhcCCcChHHHHHHHHHHHhCCCcEEEEE---------------------------------------
Confidence 99999999999976555556778888899999999999999
Q ss_pred ccceEEEeeeecccccCCcHHHHHHHHHcCCeEEEEeCCCHhhHHHHHHHcCccccCceEEEEecCCchhhhhhhhcchH
Q 001008 697 RDLILLGATAVEDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKE 776 (1191)
Q Consensus 697 ~dl~llG~~~ieD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~ 776 (1191)
.|++++|+++++|++|+|++++|++||++||+++|+|||++.||.+||+++|+.
T Consensus 432 ~~~~~lG~i~l~D~~R~~~~eai~~Lr~~GI~vvMiTGDn~~TA~aIA~elGId-------------------------- 485 (679)
T PRK01122 432 EDNRVLGVIYLKDIVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAEAGVD-------------------------- 485 (679)
T ss_pred ECCeEEEEEEEeccCchhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCc--------------------------
Confidence 467899999999999999999999999999999999999999999999999992
Q ss_pred HHHHHHHHHHHHHHHhhcccccccccccceeEEEEeCchhhHHhHHHHHHHHHHHHhhcCceEEEcCChhhHHHHHHHhh
Q 001008 777 NITKVSLESVTKQIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLVK 856 (1191)
Q Consensus 777 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~l~~~~~~~v~~r~sP~qK~~iV~~l~ 856 (1191)
.++||++|+||.++|+.+|
T Consensus 486 -------------------------------------------------------------~v~A~~~PedK~~iV~~lQ 504 (679)
T PRK01122 486 -------------------------------------------------------------DFLAEATPEDKLALIRQEQ 504 (679)
T ss_pred -------------------------------------------------------------EEEccCCHHHHHHHHHHHH
Confidence 1899999999999999999
Q ss_pred cCCCEEEEEcCCccChHhhhhcceeEEe-ccCccchhhhccceeccc--hhhhhHhhhhhchhhhhHhhHhHHHHHHhHH
Q 001008 857 GTGKTTLAIGDGANDVGMLQEADIGVGI-SGVEGMQAVMSSDYAIAQ--FRFLERLLLVHGHWCYRRISMMICYFFYKNL 933 (1191)
Q Consensus 857 ~~g~~vl~iGDG~ND~~ml~~AdvGI~i-~g~e~~~a~~~aD~vl~~--f~~l~~lll~~GR~~~~~i~~~i~~~~~~n~ 933 (1191)
+.|+.|+|+|||.||+|||++|||||+| +|++. |+++||++++| |..+..+ +.+||...-.-..+..|++.--+
T Consensus 505 ~~G~~VaMtGDGvNDAPALa~ADVGIAMgsGTdv--AkeAADiVLldd~~s~Iv~a-v~~GR~~~~tr~~~~~f~~~n~~ 581 (679)
T PRK01122 505 AEGRLVAMTGDGTNDAPALAQADVGVAMNSGTQA--AKEAGNMVDLDSNPTKLIEV-VEIGKQLLMTRGALTTFSIANDV 581 (679)
T ss_pred HcCCeEEEECCCcchHHHHHhCCEeEEeCCCCHH--HHHhCCEEEeCCCHHHHHHH-HHHHHHHHhhhHhhhhhhHHHHH
Confidence 9999999999999999999999999999 45555 89999999998 5558888 89999999777777788877555
Q ss_pred HHHHHHHHHHhhhccccccchhH----------HHHHHHHHHhh--hhhHHhhhcccccCChhhhhcC-ccch
Q 001008 934 TFGFTLFWYEAYASFSGRPAYND----------WYMSCYNVFFT--SLPVIALGVFDQDVSARLCLKY-PLLY 993 (1191)
Q Consensus 934 ~~~~~~~~~~~~~~~s~~~~~~~----------~~~l~~n~~~~--~~p~~~l~~~~~d~~~~~~~~~-P~ly 993 (1191)
+-.+..+-..|...+.+...++. ..-+.||-+.. .+|.-.-|+..++.+...++++ --+|
T Consensus 582 ~~~~~i~p~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 654 (679)
T PRK01122 582 AKYFAIIPAMFAATYPQLNALNIMHLHSPQSAILSALIFNALIIVALIPLALKGVKYRPLSAAALLRRNLLIY 654 (679)
T ss_pred HHHHHHHHHHHHhhCccccccccccCCChHHHHHHHHHHHHHHHHHhHHHHhcCccccccCHHHHHhhceeEe
Confidence 44433333333222222222221 12245565432 3344444555566666555543 3344
No 22
>TIGR01497 kdpB K+-transporting ATPase, B subunit. One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR.
Probab=100.00 E-value=3e-71 Score=666.09 Aligned_cols=589 Identities=19% Similarity=0.218 Sum_probs=446.4
Q ss_pred HHHHHHHHHHHHHHHHHHhccc-CCc-------C--CCchhh--HHHHHHHHHHHHHHHHHHHHHhhhHHHHh---cc-e
Q 001008 76 FEQFRRVANIYFLVVAFVSFSP-LAP-------Y--SAPSVL--APLIVVIGATMAKEGVEDWRRRKQDIEAN---NR-K 139 (1191)
Q Consensus 76 ~~qf~~~~n~~fl~~~il~~~~-~~~-------~--~~~~~~--~~l~~vl~~~~i~~~~~d~~r~k~~~~~n---~~-~ 139 (1191)
-.||++|..+.+++.++++++. +.+ . .|+... +.+++.+++....|.+.++|..++.+.++ +. .
T Consensus 27 ~~~~~~p~~~il~~~a~is~~l~~~~~~~~~~~~~~~~~~~~i~~~l~~~vl~g~~~e~~ae~ra~~~~~~L~~~~~~~~ 106 (675)
T TIGR01497 27 KAQWRNPVMFIVWVGSLLTTCITIAPASFGMPGNNLALFNAIITGILFITVLFANFAEAVAEGRGKAQADSLKGTKKTTF 106 (675)
T ss_pred HHHhhChHHHHHHHHHHHHHHHHHhhhccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCce
Confidence 3589999999999998888774 210 1 123221 33444456666777888888887766665 23 4
Q ss_pred EEEEecCCeEEEEeccccccccEEEEeCCCcccceEEEEeeeCCCceEEEEeccCCcccccEeecchhhhcccCChhhhc
Q 001008 140 VKVYGQDHTFVETKWKNLRVGDLVKVHKDEYFPADLLLLSSIYEDGICYVETMNLDGETNLKLKRSLEATNHLRDEESFQ 219 (1191)
Q Consensus 140 ~~V~r~~g~~~~i~~~~L~vGDIV~l~~ge~iPaD~~lL~ss~~~g~~~Vd~s~LtGEs~~~~K~~~~~~~~~~~~~~~~ 219 (1191)
++|+|+||++++|+.++|+|||+|.|++||.|||||++++ |.+.||||+|||||.|+.|.+++...
T Consensus 107 a~vlr~dg~~~~V~~~~L~~GDiV~V~~Gd~IPaDG~vie-----G~~~VDESaLTGES~PV~K~~g~~~~--------- 172 (675)
T TIGR01497 107 AKLLRDDGAIDKVPADQLKKGDIVLVEAGDVIPCDGEVIE-----GVASVDESAITGESAPVIKESGGDFA--------- 172 (675)
T ss_pred EEEEeeCCEEEEEEHHHCCCCCEEEECCCCEEeeeEEEEE-----ccEEEEcccccCCCCceeecCCCCcc---------
Confidence 7787548999999999999999999999999999999999 56999999999999999999865320
Q ss_pred ccceEEEeecCCCCceeeEEEEEEcCeeeccCCCceeecCcEeecCCeEEEEEEEecchhhH---hhccCCCCCCCCHHH
Q 001008 220 KFTAVIKCEDPNERLYSFVGTLQYEGKQYPLSPQQILLRDSKLKNTDYVYGVVVFTGHDTKV---MQNATDPPSKRSKIE 296 (1191)
Q Consensus 220 ~~~~~i~~e~pn~~~~~f~Gt~~~~g~~~~l~~~n~l~rgs~l~nt~~~~gvVv~tG~~Tki---~~~~~~~~~k~s~l~ 296 (1191)
..|+||.+.+|. +.++|+.+|.+|.+ ....+.++.+++|+|
T Consensus 173 ---------------~V~aGT~v~~G~---------------------~~i~Vt~~g~~S~lgri~~lve~a~~~ktplq 216 (675)
T TIGR01497 173 ---------------SVTGGTRILSDW---------------------LVVECTANPGETFLDRMIALVEGAQRRKTPNE 216 (675)
T ss_pred ---------------eeecCcEEEeeE---------------------EEEEEEEecccCHHHHHHHHHHhcccCCChHH
Confidence 248999999888 99999999999954 555567777889999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhhhcccccCCCccccccccCCCCCcccCCCCchhHHHHHHHHHHHHhhccccchh
Q 001008 297 RKMDKIVYLLFSTLILISSTGSVFFGIETKRDIDGGKIRRWYLQPDDATVFYDPRRAPLAAFLHFLTGLMLYGYLIPISL 376 (1191)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ll~~~iP~sL 376 (1191)
..++.+...+.++.++++++.+ .+..|.. ....+...+.+++.+||++|
T Consensus 217 ~~l~~l~~~l~~v~li~~~~~~-~~~~~~~------------------------------~~~~~~~lvallV~aiP~aL 265 (675)
T TIGR01497 217 IALTILLIALTLVFLLVTATLW-PFAAYGG------------------------------NAISVTVLVALLVCLIPTTI 265 (675)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH-HHHHhcC------------------------------hhHHHHHHHHHHHHhCchhh
Confidence 9888877655443333222111 1111110 00134556788999999988
Q ss_pred hhHHHHHHHHHHHHHhhcccccccCCCCCccccCccccccccceeEEEecCCCccccceeEEEEEEEcCeeeccchhHHH
Q 001008 377 YISIEIVKVLQSVFINHDRDMYYEDTDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFVKCSVAGVAYGRVMTEVE 456 (1191)
Q Consensus 377 ~v~~~~~~~~~~~~i~~d~~m~~~~~~~~~~v~~~~~~e~Lg~v~~i~~DKTGTLT~n~m~~~~~~i~~~~y~~~~~~~~ 456 (1191)
......+...++.++ .++++++|+...+|.||++|+||||||||||+|+|++.+++..+..
T Consensus 266 g~l~~av~iag~~r~----------ar~gvLvK~~~avE~lg~v~~I~~DKTGTLT~g~~~v~~~~~~~~~--------- 326 (675)
T TIGR01497 266 GGLLSAIGIAGMDRV----------LGFNVIATSGRAVEACGDVDTLLLDKTGTITLGNRLASEFIPAQGV--------- 326 (675)
T ss_pred hhHHHHHHHHHHHHH----------HHCCeEeeCcHHHHHhhCCCEEEECCCCcccCCCeEEEEEEecCCC---------
Confidence 766666666666666 7899999999999999999999999999999999999887531100
Q ss_pred HHHHHhhCCcccccCCCCCCCCCCCCccccCCCccCCcccCChhhhcccCCCCCChHHHHHHHHHHhhhccceeccCCCC
Q 001008 457 RTLAKRKGERTFEVDDSQTDAPGLNGNIVESGKSVKGFNFRDERIMNGQWVNEPHSDVIQKFFRVLAICHTAIPDVNEET 536 (1191)
Q Consensus 457 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~lalC~~~~~~~~~~~ 536 (1191)
..++++...++|+..
T Consensus 327 ---------------------------------------------------------~~~~ll~~aa~~~~~-------- 341 (675)
T TIGR01497 327 ---------------------------------------------------------DEKTLADAAQLASLA-------- 341 (675)
T ss_pred ---------------------------------------------------------cHHHHHHHHHHhcCC--------
Confidence 012455666666432
Q ss_pred CceEEecCCccHHHHHHHHHHcCcEEEeecCCeeEEEecCCCCccccceEEEEeEeecccCCCceEEEEEEcCCCcEEEE
Q 001008 537 GEISYEAESPDEAAFVIAAREVGFQFFGSSQTSISLHELDPVSGQKVNRVYELLHVLEFTSSRKRMSVMVRNPENQLLLL 616 (1191)
Q Consensus 537 ~~~~y~~~sp~e~Alv~~a~~~g~~~~~~~~~~~~i~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~ 616 (1191)
+.||.+.|++++|++.|.... ...++.....||++.+|+|++.+. +| ..+
T Consensus 342 ------s~hP~a~Aiv~~a~~~~~~~~--------------------~~~~~~~~~~pf~~~~~~sg~~~~--~g--~~~ 391 (675)
T TIGR01497 342 ------DDTPEGKSIVILAKQLGIRED--------------------DVQSLHATFVEFTAQTRMSGINLD--NG--RMI 391 (675)
T ss_pred ------CCCcHHHHHHHHHHHcCCCcc--------------------ccccccceEEEEcCCCcEEEEEEe--CC--eEE
Confidence 258999999999998775321 112234567899999887776554 34 578
Q ss_pred EeccchHHHHHHhhcChhhHHHHHHHHHHHHhccceEEEEEEEecCHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHHhh
Q 001008 617 CKGADSVMFERLSKHGQQFEAETRRHINRYAEAGLRTLVIAYRELGEDEYRIWEKEFLKAKTSVTSDREALVASAAEKIE 696 (1191)
Q Consensus 617 ~KGa~~~i~~~~~~~~~~~~~~~~~~l~~~a~~GlR~L~~A~r~l~~~~~~~~~~~~~~a~~~l~~~r~~~~~~~~~~iE 696 (1191)
+|||++.+++.|...+...+.++.+.+++++++|+|++++|
T Consensus 392 ~kGa~e~i~~~~~~~g~~~~~~~~~~~~~~a~~G~r~l~va--------------------------------------- 432 (675)
T TIGR01497 392 RKGAVDAIKRHVEANGGHIPTDLDQAVDQVARQGGTPLVVC--------------------------------------- 432 (675)
T ss_pred EECCHHHHHHHHHhcCCCCcHHHHHHHHHHHhCCCeEEEEE---------------------------------------
Confidence 99999999998876544455677888899999999999999
Q ss_pred ccceEEEeeeecccccCCcHHHHHHHHHcCCeEEEEeCCCHhhHHHHHHHcCccccCceEEEEecCCchhhhhhhhcchH
Q 001008 697 RDLILLGATAVEDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKE 776 (1191)
Q Consensus 697 ~dl~llG~~~ieD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~ 776 (1191)
.|.+++|+++++|++|||++++|++||++||+++|+|||+..||..+|+++|+.
T Consensus 433 ~~~~~lG~i~l~D~~Rp~a~eaI~~l~~~Gi~v~miTGD~~~ta~~iA~~lGI~-------------------------- 486 (675)
T TIGR01497 433 EDNRIYGVIYLKDIVKGGIKERFAQLRKMGIKTIMITGDNRLTAAAIAAEAGVD-------------------------- 486 (675)
T ss_pred ECCEEEEEEEecccchhHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCC--------------------------
Confidence 356899999999999999999999999999999999999999999999999982
Q ss_pred HHHHHHHHHHHHHHHhhcccccccccccceeEEEEeCchhhHHhHHHHHHHHHHHHhhcCceEEEcCChhhHHHHHHHhh
Q 001008 777 NITKVSLESVTKQIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLVK 856 (1191)
Q Consensus 777 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~l~~~~~~~v~~r~sP~qK~~iV~~l~ 856 (1191)
.+++|++|++|..+|+.+|
T Consensus 487 -------------------------------------------------------------~v~a~~~PedK~~~v~~lq 505 (675)
T TIGR01497 487 -------------------------------------------------------------DFIAEATPEDKIALIRQEQ 505 (675)
T ss_pred -------------------------------------------------------------EEEcCCCHHHHHHHHHHHH
Confidence 1789999999999999999
Q ss_pred cCCCEEEEEcCCccChHhhhhcceeEEec-cCccchhhhccceeccc--hhhhhHhhhhhchhhhhHhhHhHHHHHHhHH
Q 001008 857 GTGKTTLAIGDGANDVGMLQEADIGVGIS-GVEGMQAVMSSDYAIAQ--FRFLERLLLVHGHWCYRRISMMICYFFYKNL 933 (1191)
Q Consensus 857 ~~g~~vl~iGDG~ND~~ml~~AdvGI~i~-g~e~~~a~~~aD~vl~~--f~~l~~lll~~GR~~~~~i~~~i~~~~~~n~ 933 (1191)
..|+.|+|+|||.||+|||++|||||+|. |++. |+++||++++| |..+..+ +.+||..+.....+..|++...+
T Consensus 506 ~~g~~VamvGDG~NDapAL~~AdvGiAm~~gt~~--akeaadivLldd~~s~Iv~a-v~~GR~~~~t~~~~~t~~~~~~~ 582 (675)
T TIGR01497 506 AEGKLVAMTGDGTNDAPALAQADVGVAMNSGTQA--AKEAANMVDLDSDPTKLIEV-VHIGKQLLITRGALTTFSIANDV 582 (675)
T ss_pred HcCCeEEEECCCcchHHHHHhCCEeEEeCCCCHH--HHHhCCEEECCCCHHHHHHH-HHHHHHHHHHHHHHheeeecccH
Confidence 89999999999999999999999999994 3343 89999999998 4558888 89999999999999999998888
Q ss_pred HHHHHHHHHHhhhccccccchh---------H-HHHHHHHHHhh--hhhHHhhhcccccCChhhhhc
Q 001008 934 TFGFTLFWYEAYASFSGRPAYN---------D-WYMSCYNVFFT--SLPVIALGVFDQDVSARLCLK 988 (1191)
Q Consensus 934 ~~~~~~~~~~~~~~~s~~~~~~---------~-~~~l~~n~~~~--~~p~~~l~~~~~d~~~~~~~~ 988 (1191)
.-.+..+-..|...+.+...++ . ..-+.||-+.. .+|.-.-|+..++.+...+++
T Consensus 583 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 649 (675)
T TIGR01497 583 AKYFAIIPAIFAAAYPQLQALNIMCLHSPDSAILSALIFNALIIPALIPLALKGVSYRPLTASALLR 649 (675)
T ss_pred HHHHHHHHHHHHhhCcchhhhccccCCChHHHHHHHHHHHHHHHHHhHHHHhcCcccccCCHHHHHh
Confidence 7766555444443332222222 1 12245565432 234334455555556555544
No 23
>KOG0209 consensus P-type ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=4.2e-70 Score=620.47 Aligned_cols=766 Identities=20% Similarity=0.248 Sum_probs=509.3
Q ss_pred ccCCCCceeecCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHhcccCCcCCCchhhHHHHHHHHHHHHHHHHHHHHHhhh
Q 001008 52 QLNYRGNYVSTTKYTAANFIPKSLFEQFRRVANIYFLVVAFVSFSPLAPYSAPSVLAPLIVVIGATMAKEGVEDWRRRKQ 131 (1191)
Q Consensus 52 ~~~~g~N~i~~~k~~~~~flp~~l~~qf~~~~n~~fl~~~il~~~~~~~~~~~~~~~~l~~vl~~~~i~~~~~d~~r~k~ 131 (1191)
.++||+|+.....+++- ..+.|.-..|+..|..++..+|+.. -.||..++.|++++. .|+---+||.+.
T Consensus 173 ~~~~G~N~fdi~vPtF~----eLFkE~A~aPfFVFQVFcvgLWCLD---eyWYySlFtLfMli~----fE~tlV~Qrm~~ 241 (1160)
T KOG0209|consen 173 KHKYGKNKFDIVVPTFS----ELFKEHAVAPFFVFQVFCVGLWCLD---EYWYYSLFTLFMLIA----FEATLVKQRMRT 241 (1160)
T ss_pred HHHhcCCccccCCccHH----HHHHHhccCceeeHhHHhHHHHHhH---HHHHHHHHHHHHHHH----HHHHHHHHHHHH
Confidence 44599999999998865 6777888889999999999999873 124444544444443 333444556655
Q ss_pred HHHH---h--cceEEEEecCCeEEEEeccccccccEEEEeC---CCcccceEEEEeeeCCCceEEEEeccCCcccccEee
Q 001008 132 DIEA---N--NRKVKVYGQDHTFVETKWKNLRVGDLVKVHK---DEYFPADLLLLSSIYEDGICYVETMNLDGETNLKLK 203 (1191)
Q Consensus 132 ~~~~---n--~~~~~V~r~~g~~~~i~~~~L~vGDIV~l~~---ge~iPaD~~lL~ss~~~g~~~Vd~s~LtGEs~~~~K 203 (1191)
..++ . +..+.|+| +++|+.+..+||.|||+|.|.. ...||||++||. |.|.|||++|||||.|..|
T Consensus 242 lse~R~Mg~kpy~I~v~R-~kKW~~l~seeLlPgDvVSI~r~~ed~~vPCDllLL~-----GsciVnEaMLtGESvPl~K 315 (1160)
T KOG0209|consen 242 LSEFRTMGNKPYTINVYR-NKKWVKLMSEELLPGDVVSIGRGAEDSHVPCDLLLLR-----GSCIVNEAMLTGESVPLMK 315 (1160)
T ss_pred HHHHHhcCCCceEEEEEe-cCcceeccccccCCCceEEeccCcccCcCCceEEEEe-----cceeechhhhcCCCccccc
Confidence 4443 2 56789999 9999999999999999999987 567999999999 6699999999999999999
Q ss_pred cchhhhcccCChhhhcccceEEEeecCCCCceeeEEEEEEcCeeeccCCCceeecCcEeec-CCeEEEEEEEecchhhHh
Q 001008 204 RSLEATNHLRDEESFQKFTAVIKCEDPNERLYSFVGTLQYEGKQYPLSPQQILLRDSKLKN-TDYVYGVVVFTGHDTKVM 282 (1191)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~i~~e~pn~~~~~f~Gt~~~~g~~~~l~~~n~l~rgs~l~n-t~~~~gvVv~tG~~Tki~ 282 (1191)
.++.... .+ ..+..+..+++...|.||.+++-..- .-++++. .+-+.|.|++||.+|.-+
T Consensus 316 E~Ie~~~----~d------~~ld~~~d~k~hVlfGGTkivQht~p---------~~~slk~pDggc~a~VlrTGFeTSQG 376 (1160)
T KOG0209|consen 316 ESIELRD----SD------DILDIDRDDKLHVLFGGTKIVQHTPP---------KKASLKTPDGGCVAYVLRTGFETSQG 376 (1160)
T ss_pred cccccCC----hh------hhcccccccceEEEEcCceEEEecCC---------ccccccCCCCCeEEEEEeccccccCC
Confidence 9887652 11 12334445566678999998853200 0111221 345899999999999432
Q ss_pred hcc---CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcccccCCCccccccccCCCCCcccCCCCchhHHHH
Q 001008 283 QNA---TDPPSKRSKIERKMDKIVYLLFSTLILISSTGSVFFGIETKRDIDGGKIRRWYLQPDDATVFYDPRRAPLAAFL 359 (1191)
Q Consensus 283 ~~~---~~~~~k~s~l~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 359 (1191)
... .....+-|-- |+-..++++++++++++. .++.|...... +.+ +--.
T Consensus 377 kLvRtilf~aervTaN----n~Etf~FILFLlVFAiaA--a~Yvwv~Gskd-------------------~~R---srYK 428 (1160)
T KOG0209|consen 377 KLVRTILFSAERVTAN----NRETFIFILFLLVFAIAA--AGYVWVEGSKD-------------------PTR---SRYK 428 (1160)
T ss_pred ceeeeEEecceeeeec----cHHHHHHHHHHHHHHHHh--hheEEEecccC-------------------cch---hhhh
Confidence 222 1111222211 222233333344444333 23344322211 111 0122
Q ss_pred HHHHHHHHhhccccchhhhHHHHHHHHHHHHHhhcccccccCCCCCccccCccccccccceeEEEecCCCccccceeEEE
Q 001008 360 HFLTGLMLYGYLIPISLYISIEIVKVLQSVFINHDRDMYYEDTDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFV 439 (1191)
Q Consensus 360 ~~~~~i~ll~~~iP~sL~v~~~~~~~~~~~~i~~d~~m~~~~~~~~~~v~~~~~~e~Lg~v~~i~~DKTGTLT~n~m~~~ 439 (1191)
.|+-+..++.+.||.-||+.++++--.....+ ++.++.|..+=.+.-.|+||+.|||||||||+..|.|.
T Consensus 429 L~LeC~LIlTSVvPpELPmELSmAVNsSL~AL----------ak~~vyCTEPFRIPfAGkvdvCCFDKTGTLT~d~lvv~ 498 (1160)
T KOG0209|consen 429 LFLECTLILTSVVPPELPMELSMAVNSSLIAL----------AKLGVYCTEPFRIPFAGKVDVCCFDKTGTLTEDDLVVE 498 (1160)
T ss_pred eeeeeeEEEeccCCCCCchhhhHHHHHHHHHH----------HHhceeecCccccccCCceeEEEecCCCccccccEEEE
Confidence 57778888999999999998777655444444 67788888888899999999999999999999999998
Q ss_pred EEEEcCeeeccchhHHHHHHHHhhCCcccccCCCCCCCCCCCCccccCCCccCCcccCChhhhcccCCCCCChHHHHHHH
Q 001008 440 KCSVAGVAYGRVMTEVERTLAKRKGERTFEVDDSQTDAPGLNGNIVESGKSVKGFNFRDERIMNGQWVNEPHSDVIQKFF 519 (1191)
Q Consensus 440 ~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 519 (1191)
.+.-.... .. . + .+-++.-.+-.
T Consensus 499 Gvag~~~~--~~--~----------------------------------------------~-------~~~s~~p~~t~ 521 (1160)
T KOG0209|consen 499 GVAGLSAD--EG--A----------------------------------------------L-------TPASKAPNETV 521 (1160)
T ss_pred ecccccCC--cc--c----------------------------------------------c-------cchhhCCchHH
Confidence 86321110 00 0 0 00001112456
Q ss_pred HHHhhhccceeccCCCCCceEEecCCccHHHHHHHHHHcCcEEEeecCCeeEEEecCCCCccccceEEEEeEeecccCCC
Q 001008 520 RVLAICHTAIPDVNEETGEISYEAESPDEAAFVIAAREVGFQFFGSSQTSISLHELDPVSGQKVNRVYELLHVLEFTSSR 599 (1191)
Q Consensus 520 ~~lalC~~~~~~~~~~~~~~~y~~~sp~e~Alv~~a~~~g~~~~~~~~~~~~i~~~~~~~~~~~~~~~~il~~~~F~s~r 599 (1191)
.++|.||+...-.++ ..++|.|+|.+++ .|+.+...+. +... ++.....++++.+.|+|.-
T Consensus 522 ~vlAscHsLv~le~~-------lVGDPlEKA~l~~---v~W~~~k~~~--v~p~-------~~~~~~lkI~~ryhFsSaL 582 (1160)
T KOG0209|consen 522 LVLASCHSLVLLEDK-------LVGDPLEKATLEA---VGWNLEKKNS--VCPR-------EGNGKKLKIIQRYHFSSAL 582 (1160)
T ss_pred HHHHHHHHHHHhcCc-------ccCChHHHHHHHh---cCcccccCcc--cCCC-------cCCCcccchhhhhhHHHHH
Confidence 799999998775443 3589999999875 5676654221 1111 1113467889999999999
Q ss_pred ceEEEEEEcCC----CcEEEEEeccchHHHHHHhhcChhhHHHHHHHHHHHHhccceEEEEEEEecCHHHHHHHHHHHHH
Q 001008 600 KRMSVMVRNPE----NQLLLLCKGADSVMFERLSKHGQQFEAETRRHINRYAEAGLRTLVIAYRELGEDEYRIWEKEFLK 675 (1191)
Q Consensus 600 krmsviv~~~~----~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~l~~~a~~GlR~L~~A~r~l~~~~~~~~~~~~~~ 675 (1191)
|||||++...+ -++++.+|||||+|.+++.. .+.++.+...+|+++|.|||++|||.+..--.+
T Consensus 583 KRmsvva~~~~~g~s~k~~~aVKGAPEvi~~ml~d----vP~dY~~iYk~ytR~GsRVLALg~K~l~~~~~~-------- 650 (1160)
T KOG0209|consen 583 KRMSVVASHQGPGSSEKYFVAVKGAPEVIQEMLRD----VPKDYDEIYKRYTRQGSRVLALGYKPLGDMMVS-------- 650 (1160)
T ss_pred HHHHhhhhcccCCCceEEEEEecCCHHHHHHHHHh----CchhHHHHHHHHhhccceEEEEecccccccchh--------
Confidence 99999998743 36899999999999998874 467778888999999999999999999742111
Q ss_pred HhhcchhhHHHHHHHHHHHhhccceEEEeeeecccccCCcHHHHHHHHHcCCeEEEEeCCCHhhHHHHHHHcCccccCce
Q 001008 676 AKTSVTSDREALVASAAEKIERDLILLGATAVEDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMK 755 (1191)
Q Consensus 676 a~~~l~~~r~~~~~~~~~~iE~dl~llG~~~ieD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~ 755 (1191)
+.-+..++.+|+||+|.|.+.|.-|+|+|++++|+.|++++.+++|+|||++.||.++|+++|+......
T Consensus 651 ----------q~rd~~Re~vEsdLtFaGFlif~CPlK~Ds~~~I~el~~SSH~vvMITGDnpLTAchVak~v~iv~k~~~ 720 (1160)
T KOG0209|consen 651 ----------QVRDLKREDVESDLTFAGFLIFSCPLKPDSKKTIKELNNSSHRVVMITGDNPLTACHVAKEVGIVEKPTL 720 (1160)
T ss_pred ----------hhhhhhhhhhhhcceeeeeEEEeCCCCccHHHHHHHHhccCceEEEEeCCCccchheehheeeeeccCce
Confidence 1112244789999999999999999999999999999999999999999999999999999999887666
Q ss_pred EEEEecCCchhhhhhhhcchHHHHHHHHHHHHHHHHhhccccccccc---ccceeEEEEeCchhhHHhHHH-HHHHHHHH
Q 001008 756 QIVITLDSPDMEALEKQGDKENITKVSLESVTKQIREGISQVNSAKE---SKVTFGLVIDGKSLDFALDKK-LEKMFLDL 831 (1191)
Q Consensus 756 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~lvi~G~~l~~~~~~~-~~~~~~~l 831 (1191)
++.+..............+ +.+ .-.+++... -...+.++++|..++.+...+ +.+.+.
T Consensus 721 vl~~~~~~~~~~~~w~s~d-~t~---------------~lp~~p~~~~~~l~~~~dlcitG~~l~~l~~~~~l~~l~~-- 782 (1160)
T KOG0209|consen 721 VLDLPEEGDGNQLEWVSVD-GTI---------------VLPLKPGKKKTLLAETHDLCITGSALDHLQATDQLRRLIP-- 782 (1160)
T ss_pred eeccCccCCCceeeEecCC-Cce---------------eecCCCCccchhhhhhhhhhcchhHHHHHhhhHHHHHhhh--
Confidence 5555443221111000000 000 000000000 123467899999999887764 333333
Q ss_pred HhhcCceEEEcCChhhHHHHHHHhhcCCCEEEEEcCCccChHhhhhcceeEEeccCcc------c---------------
Q 001008 832 AIDCASVICCRSSPKQKALVTRLVKGTGKTTLAIGDGANDVGMLQEADIGVGISGVEG------M--------------- 890 (1191)
Q Consensus 832 ~~~~~~~v~~r~sP~qK~~iV~~l~~~g~~vl~iGDG~ND~~ml~~AdvGI~i~g~e~------~--------------- 890 (1191)
.+.||||+.|.||..++..++..|+.++|||||.||++||++||||||+-.+.. .
T Consensus 783 ----hv~VfARvaP~QKE~ii~tlK~~Gy~TLMCGDGTNDVGALK~AhVGVALL~~~~e~~~~~~~~~~~k~~~~~~~~~ 858 (1160)
T KOG0209|consen 783 ----HVWVFARVAPKQKEFIITTLKKLGYVTLMCGDGTNDVGALKQAHVGVALLNNPEESKKDKEKRRKKKLKLEPAKQT 858 (1160)
T ss_pred ----heeEEEeeChhhHHHHHHHHHhcCeEEEEecCCCcchhhhhhcccceehhcCChhhhhHHhhhhhhccccCchhhH
Confidence 345999999999999999999999999999999999999999999998733111 0
Q ss_pred -------------------------------------------------hhhhccceeccc--hhhhhHhhhhhchhhhh
Q 001008 891 -------------------------------------------------QAVMSSDYAIAQ--FRFLERLLLVHGHWCYR 919 (1191)
Q Consensus 891 -------------------------------------------------~a~~~aD~vl~~--f~~l~~lll~~GR~~~~ 919 (1191)
+|+.+|.|...- -..+.+. ++.||+...
T Consensus 859 ~~~~~~~~~~~~~p~~~~~~~~~~~~~e~l~~i~kdlee~~~~p~vKLGDASiAAPFTsK~asv~~v~~I-IrQGRctLV 937 (1160)
T KOG0209|consen 859 IAANRQNSPRPPVPPAERHNPHAEKTRERLKKILKDLEEDKGDPLVKLGDASIAAPFTSKLASVSSVTHI-IRQGRCTLV 937 (1160)
T ss_pred HHhhhccCCCCCCCCccccChhHHHHHHHHHHHHHHHhhcccCccccccccccccccccccchHHHHHHH-HHhcchhHH
Confidence 012223332211 2224444 899999887
Q ss_pred HhhHhHHHHHHhHHHHHHHHHHHHhhh-ccccccchhHHHHHHHHHHhhhhhHHhhhcccccCChhhhhcCccchhcccc
Q 001008 920 RISMMICYFFYKNLTFGFTLFWYEAYA-SFSGRPAYNDWYMSCYNVFFTSLPVIALGVFDQDVSARLCLKYPLLYQEGVQ 998 (1191)
Q Consensus 920 ~i~~~i~~~~~~n~~~~~~~~~~~~~~-~~s~~~~~~~~~~l~~n~~~~~~p~~~l~~~~~d~~~~~~~~~P~ly~~~~~ 998 (1191)
..-++ +|-+++-.+.-.|.... ...|.- |.+.|.+.--+++ .+.++.+....+-+. |.+..|.
T Consensus 938 tTlQM-----fKILALN~LisAYslSvlyldGVK-fgD~QaTisGlLl---a~cFlfISrskPLet-------LSkeRP~ 1001 (1160)
T KOG0209|consen 938 TTLQM-----FKILALNCLISAYSLSVLYLDGVK-FGDTQATISGLLL---AACFLFISRSKPLET-------LSKERPL 1001 (1160)
T ss_pred HHHHH-----HHHHHHHHHHHHHHHHHhhhcCce-ecchhHhHHHHHH---HHHHhheecCCchhh-------HhhcCCC
Confidence 66544 33333333333332211 112222 6666766655443 233333433222222 3334455
Q ss_pred CCccchhhHHHhhHhHHHHHHHHHHHHHhh
Q 001008 999 NILFSWPRILGWMSNGVLSAIIIFFFTTNS 1028 (1191)
Q Consensus 999 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 1028 (1191)
..+||...+...+.+-+.|...++++.-..
T Consensus 1002 ~nIFN~Y~i~svl~QFaVH~~tLvYi~~~a 1031 (1160)
T KOG0209|consen 1002 PNIFNVYIILSVLLQFAVHIATLVYITGEA 1031 (1160)
T ss_pred CCcchHHHHHHHHHHHHHHHHHhhhhHHHH
Confidence 678999888888887777777666665444
No 24
>KOG0205 consensus Plasma membrane H+-transporting ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.4e-71 Score=616.70 Aligned_cols=606 Identities=18% Similarity=0.201 Sum_probs=465.9
Q ss_pred CccccccCCCCceeecCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHhccc-CC--cCCCchhhHHHHHHHHHHHHHHHH
Q 001008 47 NPEVVQLNYRGNYVSTTKYTAANFIPKSLFEQFRRVANIYFLVVAFVSFSP-LA--PYSAPSVLAPLIVVIGATMAKEGV 123 (1191)
Q Consensus 47 ~~~~~~~~~g~N~i~~~k~~~~~flp~~l~~qf~~~~n~~fl~~~il~~~~-~~--~~~~~~~~~~l~~vl~~~~i~~~~ 123 (1191)
+.+.|+++||.|+....|-+.+ +.|+.-|..|..|..-.++++.... -+ ....|....-++..+++++...++
T Consensus 41 E~~eRlk~fG~NkleEkken~~----lKFl~Fm~~PlswVMEaAAimA~~Lang~~~~~DW~DF~gI~~LLliNsti~Fv 116 (942)
T KOG0205|consen 41 EVEERLKIFGPNKLEEKKESKF----LKFLGFMWNPLSWVMEAAAIMAIGLANGGGRPPDWQDFVGICCLLLINSTISFI 116 (942)
T ss_pred HHHHHHHhhCchhhhhhhhhHH----HHHHHHHhchHHHHHHHHHHHHHHHhcCCCCCcchhhhhhhheeeeecceeeee
Confidence 4467899999999999998876 6677888889889888888887663 11 111344455566777888888899
Q ss_pred HHHHHhhhHHHHh---cceEEEEecCCeEEEEeccccccccEEEEeCCCcccceEEEEeeeCCCceEEEEeccCCccccc
Q 001008 124 EDWRRRKQDIEAN---NRKVKVYGQDHTFVETKWKNLRVGDLVKVHKDEYFPADLLLLSSIYEDGICYVETMNLDGETNL 200 (1191)
Q Consensus 124 ~d~~r~k~~~~~n---~~~~~V~r~~g~~~~i~~~~L~vGDIV~l~~ge~iPaD~~lL~ss~~~g~~~Vd~s~LtGEs~~ 200 (1191)
|+++.-..-.++. ..+++|+| ||+|.++..+.|+|||||.++.|+.||||++||+... +.||+|.|||||.|
T Consensus 117 eE~nAGn~aa~L~a~LA~KakVlR-DGkw~E~eAs~lVPGDIlsik~GdIiPaDaRLl~gD~----LkiDQSAlTGESLp 191 (942)
T KOG0205|consen 117 EENNAGNAAAALMAGLAPKAKVLR-DGKWSEQEASILVPGDILSIKLGDIIPADARLLEGDP----LKIDQSALTGESLP 191 (942)
T ss_pred eccccchHHHHHHhccCcccEEee-cCeeeeeeccccccCceeeeccCCEecCccceecCCc----cccchhhhcCCccc
Confidence 9988776654443 56889999 9999999999999999999999999999999999653 89999999999999
Q ss_pred EeecchhhhcccCChhhhcccceEEEeecCCCCceeeEEEEEEcCeeeccCCCceeecCcEeecCCeEEEEEEEecchhh
Q 001008 201 KLKRSLEATNHLRDEESFQKFTAVIKCEDPNERLYSFVGTLQYEGKQYPLSPQQILLRDSKLKNTDYVYGVVVFTGHDTK 280 (1191)
Q Consensus 201 ~~K~~~~~~~~~~~~~~~~~~~~~i~~e~pn~~~~~f~Gt~~~~g~~~~l~~~n~l~rgs~l~nt~~~~gvVv~tG~~Tk 280 (1191)
+.|.+++.+ |+|+.+-+|+ +.+||++||.+|-
T Consensus 192 vtKh~gd~v---------------------------fSgSTcKqGE---------------------~eaVViATg~~TF 223 (942)
T KOG0205|consen 192 VTKHPGDEV---------------------------FSGSTCKQGE---------------------IEAVVIATGVHTF 223 (942)
T ss_pred cccCCCCce---------------------------ecccccccce---------------------EEEEEEEecccee
Confidence 999999987 9999999999 9999999999994
Q ss_pred H---hhccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcccccCCCccccccccCCCCCcccCCCCchhHH
Q 001008 281 V---MQNATDPPSKRSKIERKMDKIVYLLFSTLILISSTGSVFFGIETKRDIDGGKIRRWYLQPDDATVFYDPRRAPLAA 357 (1191)
Q Consensus 281 i---~~~~~~~~~k~s~l~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 357 (1191)
. ...+.. .....++++.++-+..++++.+. +.+++-+...++..... +-+
T Consensus 224 ~GkAA~LVds-t~~~GHFqkVLt~IGn~ci~si~-~g~lie~~vmy~~q~R~-------~r~------------------ 276 (942)
T KOG0205|consen 224 FGKAAHLVDS-TNQVGHFQKVLTGIGNFCICSIA-LGMLIEITVMYPIQHRL-------YRD------------------ 276 (942)
T ss_pred ehhhHHhhcC-CCCcccHHHHHHhhhhHHHHHHH-HHHHHHHHhhhhhhhhh-------hhh------------------
Confidence 4 333333 56678999999998877654333 33333222222221110 000
Q ss_pred HHHHHHHHHHhhccccchhhhHHHHHHHHHHHHHhhcccccccCCCCCccccCccccccccceeEEEecCCCccccceeE
Q 001008 358 FLHFLTGLMLYGYLIPISLYISIEIVKVLQSVFINHDRDMYYEDTDKPARARTSNLNEELGQVDTILSDKTGTLTCNSME 437 (1191)
Q Consensus 358 ~~~~~~~i~ll~~~iP~sL~v~~~~~~~~~~~~i~~d~~m~~~~~~~~~~v~~~~~~e~Lg~v~~i~~DKTGTLT~n~m~ 437 (1191)
..-+-+++++.-||++||..+++...+++.++ ++++++++..+++|+|+.+|++|+|||||||.|+++
T Consensus 277 --~i~nLlvllIGgiPiamPtVlsvTMAiGs~rL----------aqqgAItkrmtAIEemAGmdVLCSDKTGTLTlNkLS 344 (942)
T KOG0205|consen 277 --GIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRL----------SQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLS 344 (942)
T ss_pred --hhhheheeeecccccccceeeeehhhHHHHHH----------HhcccHHHHHHHHHHhhCceEEeecCcCceeeccee
Confidence 12223344555699999999999999999998 889999999999999999999999999999999999
Q ss_pred EEE----EEEcCeeeccchhHHHHHHHHhhCCcccccCCCCCCCCCCCCccccCCCccCCcccCChhhhcccCCCCCChH
Q 001008 438 FVK----CSVAGVAYGRVMTEVERTLAKRKGERTFEVDDSQTDAPGLNGNIVESGKSVKGFNFRDERIMNGQWVNEPHSD 513 (1191)
Q Consensus 438 ~~~----~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 513 (1191)
+.+ ++..|..
T Consensus 345 vdknl~ev~v~gv~------------------------------------------------------------------ 358 (942)
T KOG0205|consen 345 VDKNLIEVFVKGVD------------------------------------------------------------------ 358 (942)
T ss_pred cCcCcceeeecCCC------------------------------------------------------------------
Confidence 865 2222211
Q ss_pred HHHHHHHHHhhhccceeccCCCCCceEEecCCccHHHHHHHHHHcCcEEEeecCCeeEEEecCCCCccccceEEEEeEee
Q 001008 514 VIQKFFRVLAICHTAIPDVNEETGEISYEAESPDEAAFVIAAREVGFQFFGSSQTSISLHELDPVSGQKVNRVYELLHVL 593 (1191)
Q Consensus 514 ~~~~~~~~lalC~~~~~~~~~~~~~~~y~~~sp~e~Alv~~a~~~g~~~~~~~~~~~~i~~~~~~~~~~~~~~~~il~~~ 593 (1191)
-+++++..|... .. ...+..|.|++...++- + .....|+.++.+
T Consensus 359 -~D~~~L~A~rAs--r~-----------en~DAID~A~v~~L~dP------K----------------eara~ikevhF~ 402 (942)
T KOG0205|consen 359 -KDDVLLTAARAS--RK-----------ENQDAIDAAIVGMLADP------K----------------EARAGIKEVHFL 402 (942)
T ss_pred -hHHHHHHHHHHh--hh-----------cChhhHHHHHHHhhcCH------H----------------HHhhCceEEeec
Confidence 011222222221 11 13578899999876431 0 015678999999
Q ss_pred cccCCCceEEEEEEcCCCcEEEEEeccchHHHHHHhhcChhhHHHHHHHHHHHHhccceEEEEEEEecCHHHHHHHHHHH
Q 001008 594 EFTSSRKRMSVMVRNPENQLLLLCKGADSVMFERLSKHGQQFEAETRRHINRYAEAGLRTLVIAYRELGEDEYRIWEKEF 673 (1191)
Q Consensus 594 ~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~l~~~a~~GlR~L~~A~r~l~~~~~~~~~~~~ 673 (1191)
|||+..||....+.+++|.....+||||+-|++.|+.. .+.+++....+++||++|+|.|++|++..++..-
T Consensus 403 PFnPV~Krta~ty~d~dG~~~r~sKGAPeqil~l~~~~-~~i~~~vh~~id~~AeRGlRSLgVArq~v~e~~~------- 474 (942)
T KOG0205|consen 403 PFNPVDKRTALTYIDPDGNWHRVSKGAPEQILKLCNED-HDIPERVHSIIDKFAERGLRSLAVARQEVPEKTK------- 474 (942)
T ss_pred cCCccccceEEEEECCCCCEEEecCCChHHHHHHhhcc-CcchHHHHHHHHHHHHhcchhhhhhhhccccccc-------
Confidence 99999999999999999999999999999999999875 4788999999999999999999999998776420
Q ss_pred HHHhhcchhhHHHHHHHHHHHhhccceEEEeeeecccccCCcHHHHHHHHHcCCeEEEEeCCCHhhHHHHHHHcCccccC
Q 001008 674 LKAKTSVTSDREALVASAAEKIERDLILLGATAVEDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQE 753 (1191)
Q Consensus 674 ~~a~~~l~~~r~~~~~~~~~~iE~dl~llG~~~ieD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~ 753 (1191)
+.-....+++|+.-+-||+|.+..++|.....-|..|.|+|||...-+...++++|+-.+-
T Consensus 475 -------------------~~~g~pw~~~gllp~fdpprhdsa~tirral~lGv~VkmitgdqlaI~keTgrrlgmgtnm 535 (942)
T KOG0205|consen 475 -------------------ESPGGPWEFVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNM 535 (942)
T ss_pred -------------------cCCCCCcccccccccCCCCccchHHHHHHHHhccceeeeecchHHHHHHhhhhhhccccCc
Confidence 1113568999999999999999999999999999999999999999999999999985443
Q ss_pred ceEEEEecCCchhhhhhhhcchHHHHHHHHHHHHHHHHhhcccccccccccceeEEEEeCchhhHHhHHHHHHHHHHHHh
Q 001008 754 MKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAI 833 (1191)
Q Consensus 754 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~l~~ 833 (1191)
.+--.+-+... .+ -+.|.+.+...+
T Consensus 536 ypss~llG~~~-----------------------------~~--------------~~~~~~v~elie------------ 560 (942)
T KOG0205|consen 536 YPSSALLGLGK-----------------------------DG--------------SMPGSPVDELIE------------ 560 (942)
T ss_pred CCchhhccCCC-----------------------------CC--------------CCCCCcHHHHhh------------
Confidence 22100000000 00 011111111111
Q ss_pred hcCceEEEcCChhhHHHHHHHhhcCCCEEEEEcCCccChHhhhhcceeEEeccCccchhhhccceeccchh--hhhHhhh
Q 001008 834 DCASVICCRSSPKQKALVTRLVKGTGKTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAIAQFR--FLERLLL 911 (1191)
Q Consensus 834 ~~~~~v~~r~sP~qK~~iV~~l~~~g~~vl~iGDG~ND~~ml~~AdvGI~i~g~e~~~a~~~aD~vl~~f~--~l~~lll 911 (1191)
++.-|+.+-|+||.++|+.+|..|+.++|+|||+||+|+|+.||+||++.+.... |..+||+|++... -+... +
T Consensus 561 --~adgfAgVfpehKy~iV~~Lq~r~hi~gmtgdgvndapaLKkAdigiava~atda-ar~asdiVltepglSviI~a-v 636 (942)
T KOG0205|consen 561 --KADGFAGVFPEHKYEIVKILQERKHIVGMTGDGVNDAPALKKADIGIAVADATDA-ARSASDIVLTEPGLSVIISA-V 636 (942)
T ss_pred --hccCccccCHHHHHHHHHHHhhcCceecccCCCcccchhhcccccceeeccchhh-hcccccEEEcCCCchhhHHH-H
Confidence 2347889999999999999999999999999999999999999999999665543 7889999999844 46666 7
Q ss_pred hhchhhhhHhhHhHHHHHHhHHHHH
Q 001008 912 VHGHWCYRRISMMICYFFYKNLTFG 936 (1191)
Q Consensus 912 ~~GR~~~~~i~~~i~~~~~~n~~~~ 936 (1191)
..+|.+|+|++.+..|.+.-.+-++
T Consensus 637 ltSraIfqrmknytiyavsitiriv 661 (942)
T KOG0205|consen 637 LTSRAIFQRMKNYTIYAVSITIRIV 661 (942)
T ss_pred HHHHHHHHHHhhheeeeehhHHHHH
Confidence 8999999999998888776555544
No 25
>TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC. The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily.
Probab=100.00 E-value=1.3e-65 Score=621.34 Aligned_cols=474 Identities=33% Similarity=0.457 Sum_probs=396.4
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhhHHHHhcceEEEEecCCeEEEEeccccccccEEEEeCCCcccceEEEEeeeCCCce
Q 001008 107 LAPLIVVIGATMAKEGVEDWRRRKQDIEANNRKVKVYGQDHTFVETKWKNLRVGDLVKVHKDEYFPADLLLLSSIYEDGI 186 (1191)
Q Consensus 107 ~~~l~~vl~~~~i~~~~~d~~r~k~~~~~n~~~~~V~r~~g~~~~i~~~~L~vGDIV~l~~ge~iPaD~~lL~ss~~~g~ 186 (1191)
+++++..++....+...++..+...++.+++++++|+| +| +++|++++|+|||+|.+++||.|||||++++ |.
T Consensus 4 ~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~v~r-~g-~~~V~~~~l~~GDiv~v~~G~~iP~Dg~vl~-----g~ 76 (499)
T TIGR01494 4 ILVLLFALVEVAAKRAAEDAIRSLKDLLVNPETVTVLR-NG-WKEIPASDLVPGDIVLVKSGEIVPADGVLLS-----GS 76 (499)
T ss_pred EhhHHHHHHHHHHHHHHHHHHHHHhhccCCCCeEEEEE-CC-eEEEEHHHCCCCCEEEECCCCEeeeeEEEEE-----cc
Confidence 34555555555666666666666666567899999999 88 9999999999999999999999999999999 56
Q ss_pred EEEEeccCCcccccEeecchhhhcccCChhhhcccceEEEeecCCCCceeeEEEEEEcCeeeccCCCceeecCcEeecCC
Q 001008 187 CYVETMNLDGETNLKLKRSLEATNHLRDEESFQKFTAVIKCEDPNERLYSFVGTLQYEGKQYPLSPQQILLRDSKLKNTD 266 (1191)
Q Consensus 187 ~~Vd~s~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~~~i~~e~pn~~~~~f~Gt~~~~g~~~~l~~~n~l~rgs~l~nt~ 266 (1191)
|.||||+|||||.|+.|++++.. |+|+.+.+|.
T Consensus 77 ~~vdes~LTGEs~pv~k~~g~~v---------------------------~~gs~~~~G~-------------------- 109 (499)
T TIGR01494 77 CFVDESNLTGESVPVLKTAGDAV---------------------------FAGTYVFNGT-------------------- 109 (499)
T ss_pred EEEEcccccCCCCCeeeccCCcc---------------------------ccCcEEeccE--------------------
Confidence 99999999999999999987655 8899999998
Q ss_pred eEEEEEEEecchhhH---hhccCCCCCCCCHHHHHHHHHH-HHHHHHHHHHHHHHHHhhhhhcccccCCCccccccccCC
Q 001008 267 YVYGVVVFTGHDTKV---MQNATDPPSKRSKIERKMDKIV-YLLFSTLILISSTGSVFFGIETKRDIDGGKIRRWYLQPD 342 (1191)
Q Consensus 267 ~~~gvVv~tG~~Tki---~~~~~~~~~k~s~l~~~~~~~~-~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~ 342 (1191)
+...|..+|.+|.. ..........++++++..+++. .++.++.++++++.++++..+....
T Consensus 110 -~~~~v~~~~~~s~~~~i~~~v~~~~~~k~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~~~~-------------- 174 (499)
T TIGR01494 110 -LIVVVSATGPNTFGGKIAVVVYTGFETKTPLQPKLDRLSDIIFILFVLLIALAVFLFWAIGLWDP-------------- 174 (499)
T ss_pred -EEEEEEEeccccHHHHHHHHHHhcCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccc--------------
Confidence 88899999999853 3333444555789999999998 6777777777666665543321100
Q ss_pred CCCcccCCCCchhHHHHHHHHHHHHhhccccchhhhHHHHHHHHHHHHHhhcccccccCCCCCccccCccccccccceeE
Q 001008 343 DATVFYDPRRAPLAAFLHFLTGLMLYGYLIPISLYISIEIVKVLQSVFINHDRDMYYEDTDKPARARTSNLNEELGQVDT 422 (1191)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~~~~i~ll~~~iP~sL~v~~~~~~~~~~~~i~~d~~m~~~~~~~~~~v~~~~~~e~Lg~v~~ 422 (1191)
. .+...+.+++.+++.+|||+|+++++++...+..++ +++++++|+++.+|+||++++
T Consensus 175 --------~----~~~~~~~~~~~vl~~~~P~aL~~~~~~~~~~~~~~~----------~~~gilvk~~~~lE~l~~v~~ 232 (499)
T TIGR01494 175 --------N----SIFKIFLRALILLVIAIPIALPLAVTIALAVGDARL----------AKKGIVVRSLNALEELGKVDY 232 (499)
T ss_pred --------c----cHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHH----------HHCCcEEechhhhhhccCCcE
Confidence 0 124478999999999999999999999999998776 778999999999999999999
Q ss_pred EEecCCCccccceeEEEEEEEcCeeeccchhHHHHHHHHhhCCcccccCCCCCCCCCCCCccccCCCccCCcccCChhhh
Q 001008 423 ILSDKTGTLTCNSMEFVKCSVAGVAYGRVMTEVERTLAKRKGERTFEVDDSQTDAPGLNGNIVESGKSVKGFNFRDERIM 502 (1191)
Q Consensus 423 i~~DKTGTLT~n~m~~~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~ 502 (1191)
+|||||||||+|+|+|+++++.+.
T Consensus 233 i~fDKTGTLT~~~~~v~~~~~~~~-------------------------------------------------------- 256 (499)
T TIGR01494 233 ICSDKTGTLTKNEMSFKKVSVLGG-------------------------------------------------------- 256 (499)
T ss_pred EEeeCCCccccCceEEEEEEecCC--------------------------------------------------------
Confidence 999999999999999998864321
Q ss_pred cccCCCCCChHHHHHHHHHHhhhccceeccCCCCCceEEecCCccHHHHHHHHHHcCcEEEeecCCeeEEEecCCCCccc
Q 001008 503 NGQWVNEPHSDVIQKFFRVLAICHTAIPDVNEETGEISYEAESPDEAAFVIAAREVGFQFFGSSQTSISLHELDPVSGQK 582 (1191)
Q Consensus 503 ~~~~~~~~~~~~~~~~~~~lalC~~~~~~~~~~~~~~~y~~~sp~e~Alv~~a~~~g~~~~~~~~~~~~i~~~~~~~~~~ 582 (1191)
++.++||+|.|++++++..+
T Consensus 257 -------------------------------------~~~s~hp~~~ai~~~~~~~~----------------------- 276 (499)
T TIGR01494 257 -------------------------------------EYLSGHPDERALVKSAKWKI----------------------- 276 (499)
T ss_pred -------------------------------------CcCCCChHHHHHHHHhhhcC-----------------------
Confidence 01247999999999886411
Q ss_pred cceEEEEeEeecccCCCceEEEEEEcCCCcEEEEEeccchHHHHHHhhcChhhHHHHHHHHHHHHhccceEEEEEEEecC
Q 001008 583 VNRVYELLHVLEFTSSRKRMSVMVRNPENQLLLLCKGADSVMFERLSKHGQQFEAETRRHINRYAEAGLRTLVIAYRELG 662 (1191)
Q Consensus 583 ~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~l~~~a~~GlR~L~~A~r~l~ 662 (1191)
+...||++.+|+|+++++.+++ .|+||+++.+.++|.. +.+.++.++.+|+|++++|++
T Consensus 277 -------~~~~~f~~~~~~~~~~~~~~~~---~~~~G~~~~i~~~~~~--------~~~~~~~~~~~g~~~~~~a~~--- 335 (499)
T TIGR01494 277 -------LNVFEFSSVRKRMSVIVRGPDG---TYVKGAPEFVLSRVKD--------LEEKVKELAQSGLRVLAVASK--- 335 (499)
T ss_pred -------cceeccCCCCceEEEEEecCCc---EEEeCCHHHHHHhhHH--------HHHHHHHHHhCCCEEEEEEEC---
Confidence 1357999999999999997433 4789999999988752 233455678899999999953
Q ss_pred HHHHHHHHHHHHHHhhcchhhHHHHHHHHHHHhhccceEEEeeeecccccCCcHHHHHHHHHcCCeEEEEeCCCHhhHHH
Q 001008 663 EDEYRIWEKEFLKAKTSVTSDREALVASAAEKIERDLILLGATAVEDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAIN 742 (1191)
Q Consensus 663 ~~~~~~~~~~~~~a~~~l~~~r~~~~~~~~~~iE~dl~llG~~~ieD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ 742 (1191)
-+++|+++++|++|++++++|+.|+++|+++||+|||+..+|..
T Consensus 336 ------------------------------------~~~~g~i~l~d~lr~~~~~~i~~l~~~gi~~~~ltGD~~~~a~~ 379 (499)
T TIGR01494 336 ------------------------------------ETLLGLLGLEDPLRDDAKETISELREAGIRVIMLTGDNVLTAKA 379 (499)
T ss_pred ------------------------------------CeEEEEEEecCCCchhHHHHHHHHHHCCCeEEEEcCCCHHHHHH
Confidence 26999999999999999999999999999999999999999999
Q ss_pred HHHHcCccccCceEEEEecCCchhhhhhhhcchHHHHHHHHHHHHHHHHhhcccccccccccceeEEEEeCchhhHHhHH
Q 001008 743 IGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQIREGISQVNSAKESKVTFGLVIDGKSLDFALDK 822 (1191)
Q Consensus 743 ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~ 822 (1191)
+|+++|+
T Consensus 380 ia~~lgi------------------------------------------------------------------------- 386 (499)
T TIGR01494 380 IAKELGI------------------------------------------------------------------------- 386 (499)
T ss_pred HHHHcCc-------------------------------------------------------------------------
Confidence 9999875
Q ss_pred HHHHHHHHHHhhcCceEEEcCChhhHHHHHHHhhcCCCEEEEEcCCccChHhhhhcceeEEeccCccchhhhccceeccc
Q 001008 823 KLEKMFLDLAIDCASVICCRSSPKQKALVTRLVKGTGKTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAIAQ 902 (1191)
Q Consensus 823 ~~~~~~~~l~~~~~~~v~~r~sP~qK~~iV~~l~~~g~~vl~iGDG~ND~~ml~~AdvGI~i~g~e~~~a~~~aD~vl~~ 902 (1191)
+||++|++|.++|+.+|..|+.|+|+|||.||++|+++|||||++. |+.+||+++.+
T Consensus 387 -----------------~~~~~p~~K~~~v~~l~~~g~~v~~vGDg~nD~~al~~Advgia~~------a~~~adivl~~ 443 (499)
T TIGR01494 387 -----------------FARVTPEEKAALVEALQKKGRVVAMTGDGVNDAPALKKADVGIAMG------AKAAADIVLLD 443 (499)
T ss_pred -----------------eeccCHHHHHHHHHHHHHCCCEEEEECCChhhHHHHHhCCCccccc------hHHhCCeEEec
Confidence 3578899999999999988999999999999999999999999994 68899999998
Q ss_pred hhh--hhHhhhhhchhhhhHhhHhHHHHHHhHHHHHHHHHH
Q 001008 903 FRF--LERLLLVHGHWCYRRISMMICYFFYKNLTFGFTLFW 941 (1191)
Q Consensus 903 f~~--l~~lll~~GR~~~~~i~~~i~~~~~~n~~~~~~~~~ 941 (1191)
++. +..+ +.+||..++++++++.|.+++|+..+.+.++
T Consensus 444 ~~l~~i~~~-~~~~r~~~~~i~~~~~~~~~~n~~~~~~a~~ 483 (499)
T TIGR01494 444 DNLSTIVDA-LKEGRKTFSTIKSNIFWAIAYNLILIPLAAL 483 (499)
T ss_pred CCHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 544 5555 8999999999999999999999997766655
No 26
>COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=9.5e-64 Score=601.86 Aligned_cols=492 Identities=22% Similarity=0.265 Sum_probs=399.7
Q ss_pred HHHHHHHHHHHHHHHHHhhhHHHH------hcceEEEEecCCeEEEEeccccccccEEEEeCCCcccceEEEEeeeCCCc
Q 001008 112 VVIGATMAKEGVEDWRRRKQDIEA------NNRKVKVYGQDHTFVETKWKNLRVGDLVKVHKDEYFPADLLLLSSIYEDG 185 (1191)
Q Consensus 112 ~vl~~~~i~~~~~d~~r~k~~~~~------n~~~~~V~r~~g~~~~i~~~~L~vGDIV~l~~ge~iPaD~~lL~ss~~~g 185 (1191)
+++++-.+-+++|++-+.|+.+.+ .+++++++++||+.++|+.++|++||+|.|++||+||+||++++ |
T Consensus 179 ~ii~l~~~G~~LE~~a~~ra~~ai~~L~~l~p~~A~~~~~~~~~~~v~v~~v~~GD~v~VrpGE~IPvDG~V~~-----G 253 (713)
T COG2217 179 MLIFLFLLGRYLEARAKGRARRAIRALLDLAPKTATVVRGDGEEEEVPVEEVQVGDIVLVRPGERIPVDGVVVS-----G 253 (713)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCEEEEEecCCcEEEEEHHHCCCCCEEEECCCCEecCCeEEEe-----C
Confidence 344455566777777777664433 48899888756669999999999999999999999999999999 6
Q ss_pred eEEEEeccCCcccccEeecchhhhcccCChhhhcccceEEEeecCCCCceeeEEEEEEcCeeeccCCCceeecCcEeecC
Q 001008 186 ICYVETMNLDGETNLKLKRSLEATNHLRDEESFQKFTAVIKCEDPNERLYSFVGTLQYEGKQYPLSPQQILLRDSKLKNT 265 (1191)
Q Consensus 186 ~~~Vd~s~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~~~i~~e~pn~~~~~f~Gt~~~~g~~~~l~~~n~l~rgs~l~nt 265 (1191)
...||||+|||||.|+.|.+++.+ |+||++.+|.
T Consensus 254 ~s~vDeS~iTGEs~PV~k~~Gd~V---------------------------~aGtiN~~G~------------------- 287 (713)
T COG2217 254 SSSVDESMLTGESLPVEKKPGDEV---------------------------FAGTVNLDGS------------------- 287 (713)
T ss_pred cEEeecchhhCCCCCEecCCCCEE---------------------------eeeEEECCcc-------------------
Confidence 689999999999999999999877 9999999998
Q ss_pred CeEEEEEEEecchhh---HhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcccccCCCccccccccCC
Q 001008 266 DYVYGVVVFTGHDTK---VMQNATDPPSKRSKIERKMDKIVYLLFSTLILISSTGSVFFGIETKRDIDGGKIRRWYLQPD 342 (1191)
Q Consensus 266 ~~~~gvVv~tG~~Tk---i~~~~~~~~~k~s~l~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~ 342 (1191)
+...|+.+|.||. |....+.++.+++|+|+..|++..++.+..++++++++++|.+.... .|
T Consensus 288 --l~i~vt~~~~dt~la~Ii~LVe~Aq~~Ka~iqrlaDr~a~~fvp~vl~ia~l~f~~w~~~~~~--------~~----- 352 (713)
T COG2217 288 --LTIRVTRVGADTTLARIIRLVEEAQSSKAPIQRLADRVASYFVPVVLVIAALTFALWPLFGGG--------DW----- 352 (713)
T ss_pred --EEEEEEecCccCHHHHHHHHHHHHhhCCchHHHHHHHHHHccHHHHHHHHHHHHHHHHHhcCC--------cH-----
Confidence 9999999999995 56667788999999999999999999999999988888766544321 12
Q ss_pred CCCcccCCCCchhHHHHHHHHHHHHhhccccchhhhHHHHHHHHHHHHHhhcccccccCCCCCccccCccccccccceeE
Q 001008 343 DATVFYDPRRAPLAAFLHFLTGLMLYGYLIPISLYISIEIVKVLQSVFINHDRDMYYEDTDKPARARTSNLNEELGQVDT 422 (1191)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~~~~i~ll~~~iP~sL~v~~~~~~~~~~~~i~~d~~m~~~~~~~~~~v~~~~~~e~Lg~v~~ 422 (1191)
-..+..++.+++..|||+|.++.+++.+.+.... +++|+++|+.+.+|.|+++|+
T Consensus 353 ---------------~~a~~~a~avLVIaCPCALgLAtP~ai~~g~g~a----------A~~GILiK~g~~LE~l~~v~t 407 (713)
T COG2217 353 ---------------ETALYRALAVLVIACPCALGLATPTAILVGIGRA----------ARRGILIKGGEALERLAKVDT 407 (713)
T ss_pred ---------------HHHHHHHHhheeeeCccHHHhHHHHHHHHHHHHH----------HhCceEEeChHHHHhhccCCE
Confidence 2378899999999999999999999999998887 899999999999999999999
Q ss_pred EEecCCCccccceeEEEEEEEcCeeeccchhHHHHHHHHhhCCcccccCCCCCCCCCCCCccccCCCccCCcccCChhhh
Q 001008 423 ILSDKTGTLTCNSMEFVKCSVAGVAYGRVMTEVERTLAKRKGERTFEVDDSQTDAPGLNGNIVESGKSVKGFNFRDERIM 502 (1191)
Q Consensus 423 i~~DKTGTLT~n~m~~~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~ 502 (1191)
|+||||||||+|+|++..+...+. + .
T Consensus 408 vvFDKTGTLT~G~p~v~~v~~~~~--~--e-------------------------------------------------- 433 (713)
T COG2217 408 VVFDKTGTLTEGKPEVTDVVALDG--D--E-------------------------------------------------- 433 (713)
T ss_pred EEEeCCCCCcCCceEEEEEecCCC--C--H--------------------------------------------------
Confidence 999999999999999998864321 0 0
Q ss_pred cccCCCCCChHHHHHHHHHHhhhccceeccCCCCCceEEecCCccHHHHHHHHHHcCcEEEeecCCeeEEEecCCCCccc
Q 001008 503 NGQWVNEPHSDVIQKFFRVLAICHTAIPDVNEETGEISYEAESPDEAAFVIAAREVGFQFFGSSQTSISLHELDPVSGQK 582 (1191)
Q Consensus 503 ~~~~~~~~~~~~~~~~~~~lalC~~~~~~~~~~~~~~~y~~~sp~e~Alv~~a~~~g~~~~~~~~~~~~i~~~~~~~~~~ 582 (1191)
.+++...+ ..+..++||...|++++|+..|..... . ....+|.+
T Consensus 434 -------------~~~L~laA--------------alE~~S~HPiA~AIv~~a~~~~~~~~~----~-----~~~i~G~G 477 (713)
T COG2217 434 -------------DELLALAA--------------ALEQHSEHPLAKAIVKAAAERGLPDVE----D-----FEEIPGRG 477 (713)
T ss_pred -------------HHHHHHHH--------------HHHhcCCChHHHHHHHHHHhcCCCCcc----c-----eeeeccCc
Confidence 11221111 122346899999999999987721110 0 11112222
Q ss_pred cceEEEEeEeecccCCCceEEEEEEcCCCcEEEEEeccchHHHHHHhhcChhhHHHHHHHHHHHHhccceEEEEEEEecC
Q 001008 583 VNRVYELLHVLEFTSSRKRMSVMVRNPENQLLLLCKGADSVMFERLSKHGQQFEAETRRHINRYAEAGLRTLVIAYRELG 662 (1191)
Q Consensus 583 ~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~l~~~a~~GlR~L~~A~r~l~ 662 (1191)
+...+ +|+ .+.-|.+..+.+.-. +... .....+.+..+|..++.++
T Consensus 478 v~~~v----------------------~g~--~v~vG~~~~~~~~~~----~~~~-~~~~~~~~~~~G~t~v~va----- 523 (713)
T COG2217 478 VEAEV----------------------DGE--RVLVGNARLLGEEGI----DLPL-LSERIEALESEGKTVVFVA----- 523 (713)
T ss_pred EEEEE----------------------CCE--EEEEcCHHHHhhcCC----Cccc-hhhhHHHHHhcCCeEEEEE-----
Confidence 22211 342 333488766543211 1111 4556778888999988888
Q ss_pred HHHHHHHHHHHHHHhhcchhhHHHHHHHHHHHhhccceEEEeeeecccccCCcHHHHHHHHHcCCeEEEEeCCCHhhHHH
Q 001008 663 EDEYRIWEKEFLKAKTSVTSDREALVASAAEKIERDLILLGATAVEDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAIN 742 (1191)
Q Consensus 663 ~~~~~~~~~~~~~a~~~l~~~r~~~~~~~~~~iE~dl~llG~~~ieD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ 742 (1191)
.|-+++|+++++|++|++++++|+.||+.||++.|+|||+..+|..
T Consensus 524 ----------------------------------~dg~~~g~i~~~D~~R~~a~~aI~~L~~~Gi~~~mLTGDn~~~A~~ 569 (713)
T COG2217 524 ----------------------------------VDGKLVGVIALADELRPDAKEAIAALKALGIKVVMLTGDNRRTAEA 569 (713)
T ss_pred ----------------------------------ECCEEEEEEEEeCCCChhHHHHHHHHHHCCCeEEEEcCCCHHHHHH
Confidence 5679999999999999999999999999999999999999999999
Q ss_pred HHHHcCccccCceEEEEecCCchhhhhhhhcchHHHHHHHHHHHHHHHHhhcccccccccccceeEEEEeCchhhHHhHH
Q 001008 743 IGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQIREGISQVNSAKESKVTFGLVIDGKSLDFALDK 822 (1191)
Q Consensus 743 ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~ 822 (1191)
||+++||.
T Consensus 570 iA~~lGId------------------------------------------------------------------------ 577 (713)
T COG2217 570 IAKELGID------------------------------------------------------------------------ 577 (713)
T ss_pred HHHHcChH------------------------------------------------------------------------
Confidence 99999992
Q ss_pred HHHHHHHHHHhhcCceEEEcCChhhHHHHHHHhhcCCCEEEEEcCCccChHhhhhcceeEEec-cCccchhhhccceecc
Q 001008 823 KLEKMFLDLAIDCASVICCRSSPKQKALVTRLVKGTGKTTLAIGDGANDVGMLQEADIGVGIS-GVEGMQAVMSSDYAIA 901 (1191)
Q Consensus 823 ~~~~~~~~l~~~~~~~v~~r~sP~qK~~iV~~l~~~g~~vl~iGDG~ND~~ml~~AdvGI~i~-g~e~~~a~~~aD~vl~ 901 (1191)
.+.+.+.|++|.++|+.+|..|++|+|+|||.||+|+|.+|||||+|. |++. |.++||++++
T Consensus 578 ---------------~v~AellPedK~~~V~~l~~~g~~VamVGDGINDAPALA~AdVGiAmG~GtDv--A~eaADvvL~ 640 (713)
T COG2217 578 ---------------EVRAELLPEDKAEIVRELQAEGRKVAMVGDGINDAPALAAADVGIAMGSGTDV--AIEAADVVLM 640 (713)
T ss_pred ---------------hheccCCcHHHHHHHHHHHhcCCEEEEEeCCchhHHHHhhcCeeEeecCCcHH--HHHhCCEEEe
Confidence 188899999999999999999999999999999999999999999994 5666 8999999999
Q ss_pred ch--hhhhHhhhhhchhhhhHhhHhHHHHHHhHHHHHHHHHHH
Q 001008 902 QF--RFLERLLLVHGHWCYRRISMMICYFFYKNLTFGFTLFWY 942 (1191)
Q Consensus 902 ~f--~~l~~lll~~GR~~~~~i~~~i~~~~~~n~~~~~~~~~~ 942 (1191)
+. +.+..+ +..+|..++++++++.|.|.+|.+++.+..+.
T Consensus 641 ~~dL~~v~~a-i~lsr~t~~~IkqNl~~A~~yn~~~iplA~~g 682 (713)
T COG2217 641 RDDLSAVPEA-IDLSRATRRIIKQNLFWAFGYNAIAIPLAAGG 682 (713)
T ss_pred cCCHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 84 447777 89999999999999999999998887665543
No 27
>PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional
Probab=100.00 E-value=4e-60 Score=590.48 Aligned_cols=485 Identities=21% Similarity=0.216 Sum_probs=385.7
Q ss_pred HHHHHHHHHHHHHHHHhhhHHHH------hcceEEEEecCCeEEEEeccccccccEEEEeCCCcccceEEEEeeeCCCce
Q 001008 113 VIGATMAKEGVEDWRRRKQDIEA------NNRKVKVYGQDHTFVETKWKNLRVGDLVKVHKDEYFPADLLLLSSIYEDGI 186 (1191)
Q Consensus 113 vl~~~~i~~~~~d~~r~k~~~~~------n~~~~~V~r~~g~~~~i~~~~L~vGDIV~l~~ge~iPaD~~lL~ss~~~g~ 186 (1191)
++++..+.+++|.+.++|+.+.+ .+.+++|+| ||++++|++++|+|||+|.|++||+|||||++++ |.
T Consensus 212 i~~l~~~g~~le~~~~~ra~~~~~~L~~l~p~~a~vir-~g~~~~v~~~~l~~GDiv~v~~G~~IP~Dg~vi~-----g~ 285 (741)
T PRK11033 212 VLLLFLIGERLEGYAASRARRGVSALMALVPETATRLR-DGEREEVAIADLRPGDVIEVAAGGRLPADGKLLS-----PF 285 (741)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEEE-CCEEEEEEHHHCCCCCEEEECCCCEEecceEEEE-----Cc
Confidence 34444555666666666654333 478899999 9999999999999999999999999999999999 56
Q ss_pred EEEEeccCCcccccEeecchhhhcccCChhhhcccceEEEeecCCCCceeeEEEEEEcCeeeccCCCceeecCcEeecCC
Q 001008 187 CYVETMNLDGETNLKLKRSLEATNHLRDEESFQKFTAVIKCEDPNERLYSFVGTLQYEGKQYPLSPQQILLRDSKLKNTD 266 (1191)
Q Consensus 187 ~~Vd~s~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~~~i~~e~pn~~~~~f~Gt~~~~g~~~~l~~~n~l~rgs~l~nt~ 266 (1191)
+.||||.|||||.|+.|.+++.. |+||++.+|.
T Consensus 286 ~~vdes~lTGEs~Pv~k~~Gd~V---------------------------~aGt~~~~G~-------------------- 318 (741)
T PRK11033 286 ASFDESALTGESIPVERATGEKV---------------------------PAGATSVDRL-------------------- 318 (741)
T ss_pred EEeecccccCCCCCEecCCCCee---------------------------ccCCEEcCce--------------------
Confidence 89999999999999999988755 9999999998
Q ss_pred eEEEEEEEecchhh---HhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcccccCCCccccccccCCC
Q 001008 267 YVYGVVVFTGHDTK---VMQNATDPPSKRSKIERKMDKIVYLLFSTLILISSTGSVFFGIETKRDIDGGKIRRWYLQPDD 343 (1191)
Q Consensus 267 ~~~gvVv~tG~~Tk---i~~~~~~~~~k~s~l~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~ 343 (1191)
+.+.|+.+|.+|. +....+++..+++|+++.+++++.++.+++++++++.+++|.++... +|
T Consensus 319 -~~i~V~~~g~~s~l~~I~~lv~~a~~~k~~~q~~~d~~a~~~~~~v~~~a~~~~~~~~~~~~~--------~~------ 383 (741)
T PRK11033 319 -VTLEVLSEPGASAIDRILHLIEEAEERRAPIERFIDRFSRIYTPAIMLVALLVILVPPLLFAA--------PW------ 383 (741)
T ss_pred -EEEEEEeccccCHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccC--------CH------
Confidence 9999999999995 45556677788999999999999999999999998888776332211 12
Q ss_pred CCcccCCCCchhHHHHHHHHHHHHhhccccchhhhHHHHHHHHHHHHHhhcccccccCCCCCccccCccccccccceeEE
Q 001008 344 ATVFYDPRRAPLAAFLHFLTGLMLYGYLIPISLYISIEIVKVLQSVFINHDRDMYYEDTDKPARARTSNLNEELGQVDTI 423 (1191)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~~~~i~ll~~~iP~sL~v~~~~~~~~~~~~i~~d~~m~~~~~~~~~~v~~~~~~e~Lg~v~~i 423 (1191)
...+.+++.+++..|||+|.++.+++...+.... +++|+++|+.+.+|.|+++|+|
T Consensus 384 --------------~~~i~~a~svlviacPcaL~latP~a~~~~l~~a----------ar~gilik~~~alE~l~~v~~v 439 (741)
T PRK11033 384 --------------QEWIYRGLTLLLIGCPCALVISTPAAITSGLAAA----------ARRGALIKGGAALEQLGRVTTV 439 (741)
T ss_pred --------------HHHHHHHHHHHHHhchhhhhhhhHHHHHHHHHHH----------HHCCeEEcCcHHHHHhhCCCEE
Confidence 1246678899999999999888888877776665 7889999999999999999999
Q ss_pred EecCCCccccceeEEEEEEEcCeeeccchhHHHHHHHHhhCCcccccCCCCCCCCCCCCccccCCCccCCcccCChhhhc
Q 001008 424 LSDKTGTLTCNSMEFVKCSVAGVAYGRVMTEVERTLAKRKGERTFEVDDSQTDAPGLNGNIVESGKSVKGFNFRDERIMN 503 (1191)
Q Consensus 424 ~~DKTGTLT~n~m~~~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~ 503 (1191)
|||||||||+|+|+|.++...+.. +
T Consensus 440 ~fDKTGTLT~g~~~v~~~~~~~~~-----~-------------------------------------------------- 464 (741)
T PRK11033 440 AFDKTGTLTEGKPQVTDIHPATGI-----S-------------------------------------------------- 464 (741)
T ss_pred EEeCCCCCcCCceEEEEEEecCCC-----C--------------------------------------------------
Confidence 999999999999999987532210 0
Q ss_pred ccCCCCCChHHHHHHHHHHhhhccceeccCCCCCceEEecCCccHHHHHHHHHHcCcEEEeecCCeeEEEecCCCCcccc
Q 001008 504 GQWVNEPHSDVIQKFFRVLAICHTAIPDVNEETGEISYEAESPDEAAFVIAAREVGFQFFGSSQTSISLHELDPVSGQKV 583 (1191)
Q Consensus 504 ~~~~~~~~~~~~~~~~~~lalC~~~~~~~~~~~~~~~y~~~sp~e~Alv~~a~~~g~~~~~~~~~~~~i~~~~~~~~~~~ 583 (1191)
.++++...+. + +..+.||.+.|+++++++.|..
T Consensus 465 -----------~~~~l~~aa~---~-----------e~~s~hPia~Ai~~~a~~~~~~---------------------- 497 (741)
T PRK11033 465 -----------ESELLALAAA---V-----------EQGSTHPLAQAIVREAQVRGLA---------------------- 497 (741)
T ss_pred -----------HHHHHHHHHH---H-----------hcCCCCHHHHHHHHHHHhcCCC----------------------
Confidence 0122222221 1 1124799999999999876532
Q ss_pred ceEEEEeEeecccCCCceEEE-EEE-cCCCcEEEEEeccchHHHHHHhhcChhhHHHHHHHHHHHHhccceEEEEEEEec
Q 001008 584 NRVYELLHVLEFTSSRKRMSV-MVR-NPENQLLLLCKGADSVMFERLSKHGQQFEAETRRHINRYAEAGLRTLVIAYREL 661 (1191)
Q Consensus 584 ~~~~~il~~~~F~s~rkrmsv-iv~-~~~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~l~~~a~~GlR~L~~A~r~l 661 (1191)
+||.++++.+.- -++ .-+|+.+. -|+++.+.+ . .+.....++.+..+|.|++++|
T Consensus 498 ---------~~~~~~~~~~~g~Gv~~~~~g~~~~--ig~~~~~~~-~-------~~~~~~~~~~~~~~g~~~v~va---- 554 (741)
T PRK11033 498 ---------IPEAESQRALAGSGIEGQVNGERVL--ICAPGKLPP-L-------ADAFAGQINELESAGKTVVLVL---- 554 (741)
T ss_pred ---------CCCCcceEEEeeEEEEEEECCEEEE--Eecchhhhh-c-------cHHHHHHHHHHHhCCCEEEEEE----
Confidence 345555555431 121 11344333 488877644 1 1234455678899999999999
Q ss_pred CHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHHhhccceEEEeeeecccccCCcHHHHHHHHHcCCeEEEEeCCCHhhHH
Q 001008 662 GEDEYRIWEKEFLKAKTSVTSDREALVASAAEKIERDLILLGATAVEDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAI 741 (1191)
Q Consensus 662 ~~~~~~~~~~~~~~a~~~l~~~r~~~~~~~~~~iE~dl~llG~~~ieD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~ 741 (1191)
.|.+++|+++++|++|+|++++|+.|++.|++++|+|||+..+|.
T Consensus 555 -----------------------------------~~~~~~g~i~l~d~~r~~a~~~i~~L~~~gi~~~llTGd~~~~a~ 599 (741)
T PRK11033 555 -----------------------------------RNDDVLGLIALQDTLRADARQAISELKALGIKGVMLTGDNPRAAA 599 (741)
T ss_pred -----------------------------------ECCEEEEEEEEecCCchhHHHHHHHHHHCCCEEEEEcCCCHHHHH
Confidence 467899999999999999999999999999999999999999999
Q ss_pred HHHHHcCccccCceEEEEecCCchhhhhhhhcchHHHHHHHHHHHHHHHHhhcccccccccccceeEEEEeCchhhHHhH
Q 001008 742 NIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQIREGISQVNSAKESKVTFGLVIDGKSLDFALD 821 (1191)
Q Consensus 742 ~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~ 821 (1191)
.+|+++||.
T Consensus 600 ~ia~~lgi~----------------------------------------------------------------------- 608 (741)
T PRK11033 600 AIAGELGID----------------------------------------------------------------------- 608 (741)
T ss_pred HHHHHcCCC-----------------------------------------------------------------------
Confidence 999999982
Q ss_pred HHHHHHHHHHHhhcCceEEEcCChhhHHHHHHHhhcCCCEEEEEcCCccChHhhhhcceeEEeccCccchhhhccceecc
Q 001008 822 KKLEKMFLDLAIDCASVICCRSSPKQKALVTRLVKGTGKTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAIA 901 (1191)
Q Consensus 822 ~~~~~~~~~l~~~~~~~v~~r~sP~qK~~iV~~l~~~g~~vl~iGDG~ND~~ml~~AdvGI~i~g~e~~~a~~~aD~vl~ 901 (1191)
.+++++|++|..+|+.++.. +.|+|+|||.||++||++|||||++.+ ....++++||+++.
T Consensus 609 -----------------~~~~~~p~~K~~~v~~l~~~-~~v~mvGDgiNDapAl~~A~vgia~g~-~~~~a~~~adivl~ 669 (741)
T PRK11033 609 -----------------FRAGLLPEDKVKAVTELNQH-APLAMVGDGINDAPAMKAASIGIAMGS-GTDVALETADAALT 669 (741)
T ss_pred -----------------eecCCCHHHHHHHHHHHhcC-CCEEEEECCHHhHHHHHhCCeeEEecC-CCHHHHHhCCEEEe
Confidence 34467899999999999754 589999999999999999999999952 22337899999998
Q ss_pred c--hhhhhHhhhhhchhhhhHhhHhHHHHHHhHHHHHHHHH
Q 001008 902 Q--FRFLERLLLVHGHWCYRRISMMICYFFYKNLTFGFTLF 940 (1191)
Q Consensus 902 ~--f~~l~~lll~~GR~~~~~i~~~i~~~~~~n~~~~~~~~ 940 (1191)
+ +..|..+ +..||..++++++++.|.+.+|++++.+.+
T Consensus 670 ~~~l~~l~~~-i~~sr~~~~~I~~nl~~a~~~n~~~i~~a~ 709 (741)
T PRK11033 670 HNRLRGLAQM-IELSRATHANIRQNITIALGLKAIFLVTTL 709 (741)
T ss_pred cCCHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6 4447777 899999999999999999999987665443
No 28
>KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=4.3e-60 Score=553.65 Aligned_cols=501 Identities=20% Similarity=0.229 Sum_probs=397.5
Q ss_pred HHHHHHHHHHHhhhHH------HHhcceEEEEecCCe-EEEEeccccccccEEEEeCCCcccceEEEEeeeCCCceEEEE
Q 001008 118 MAKEGVEDWRRRKQDI------EANNRKVKVYGQDHT-FVETKWKNLRVGDLVKVHKDEYFPADLLLLSSIYEDGICYVE 190 (1191)
Q Consensus 118 ~i~~~~~d~~r~k~~~------~~n~~~~~V~r~~g~-~~~i~~~~L~vGDIV~l~~ge~iPaD~~lL~ss~~~g~~~Vd 190 (1191)
.+..+.|...++|+-. .+.+.++.++. +|+ .++|+.+.|++||+|+|.+|++||+||++++ |.++||
T Consensus 352 ~lgr~LE~~Ak~kts~alskLmsl~p~~a~ii~-~g~~e~eI~v~lvq~gdivkV~pG~kiPvDG~Vv~-----Gss~VD 425 (951)
T KOG0207|consen 352 TLGRWLESLAKGKTSEALSKLMSLAPSKATIIE-DGSEEKEIPVDLVQVGDIVKVKPGEKIPVDGVVVD-----GSSEVD 425 (951)
T ss_pred HHHHHHHHHhhccchHHHHHHhhcCcccceEee-cCCcceEeeeeeeccCCEEEECCCCccccccEEEe-----Cceeec
Confidence 3445666666666533 33488999998 886 8999999999999999999999999999999 669999
Q ss_pred eccCCcccccEeecchhhhcccCChhhhcccceEEEeecCCCCceeeEEEEEEcCeeeccCCCceeecCcEeecCCeEEE
Q 001008 191 TMNLDGETNLKLKRSLEATNHLRDEESFQKFTAVIKCEDPNERLYSFVGTLQYEGKQYPLSPQQILLRDSKLKNTDYVYG 270 (1191)
Q Consensus 191 ~s~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~~~i~~e~pn~~~~~f~Gt~~~~g~~~~l~~~n~l~rgs~l~nt~~~~g 270 (1191)
||.+|||+.|+.|++++.+ .+|+++.+|. .+.
T Consensus 426 Es~iTGEs~PV~Kk~gs~V---------------------------iaGsiN~nG~---------------------l~V 457 (951)
T KOG0207|consen 426 ESLITGESMPVPKKKGSTV---------------------------IAGSINLNGT---------------------LLV 457 (951)
T ss_pred hhhccCCceecccCCCCee---------------------------eeeeecCCce---------------------EEE
Confidence 9999999999999998876 8999999998 999
Q ss_pred EEEEecchh---hHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcccccCCCccccccccCCCCCcc
Q 001008 271 VVVFTGHDT---KVMQNATDPPSKRSKIERKMDKIVYLLFSTLILISSTGSVFFGIETKRDIDGGKIRRWYLQPDDATVF 347 (1191)
Q Consensus 271 vVv~tG~~T---ki~~~~~~~~~k~s~l~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 347 (1191)
-++.+|.|| +|.+..++++..++|+|+.+|+++.++.++++++++.++++|.+..... .||-
T Consensus 458 kaT~~g~dttla~IvkLVEEAQ~sKapiQq~aDkia~yFvP~Vi~lS~~t~~~w~~~g~~~-------~~~~-------- 522 (951)
T KOG0207|consen 458 KATKVGGDTTLAQIVKLVEEAQLSKAPIQQLADKIAGYFVPVVIVLSLATFVVWILIGKIV-------FKYP-------- 522 (951)
T ss_pred EEEeccccchHHHHHHHHHHHHcccchHHHHHHHhhhcCCchhhHHHHHHHHHHHHHcccc-------ccCc--------
Confidence 999999999 4567778899999999999999999999999999999999888765433 1221
Q ss_pred cCCCCchhHHHHHHHHHHHHhhccccchhhhHHHHHHHHHHHHHhhcccccccCCCCCccccCccccccccceeEEEecC
Q 001008 348 YDPRRAPLAAFLHFLTGLMLYGYLIPISLYISIEIVKVLQSVFINHDRDMYYEDTDKPARARTSNLNEELGQVDTILSDK 427 (1191)
Q Consensus 348 ~~~~~~~~~~~~~~~~~i~ll~~~iP~sL~v~~~~~~~~~~~~i~~d~~m~~~~~~~~~~v~~~~~~e~Lg~v~~i~~DK 427 (1191)
..+...+...|..++.+++.+|||+|.++.+++.+.+...- +.+|+++|..+.+|.+.+|++|.|||
T Consensus 523 ---~~~~~~~~~a~~~aisVlviACPCaLgLATPtAvmvatgvg----------A~nGvLIKGge~LE~~hkv~tVvFDK 589 (951)
T KOG0207|consen 523 ---RSFFDAFSHAFQLAISVLVIACPCALGLATPTAVMVATGVG----------ATNGVLIKGGEALEKAHKVKTVVFDK 589 (951)
T ss_pred ---chhhHHHHHHHHhhheEEEEECchhhhcCCceEEEEEechh----------hhcceEEcCcHHHHHHhcCCEEEEcC
Confidence 11112345678889999999999999999888877776554 78999999999999999999999999
Q ss_pred CCccccceeEEEEEEEcCeeeccchhHHHHHHHHhhCCcccccCCCCCCCCCCCCccccCCCccCCcccCChhhhcccCC
Q 001008 428 TGTLTCNSMEFVKCSVAGVAYGRVMTEVERTLAKRKGERTFEVDDSQTDAPGLNGNIVESGKSVKGFNFRDERIMNGQWV 507 (1191)
Q Consensus 428 TGTLT~n~m~~~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 507 (1191)
|||||+|++.+.++...+...
T Consensus 590 TGTLT~G~~~V~~~~~~~~~~----------------------------------------------------------- 610 (951)
T KOG0207|consen 590 TGTLTEGKPTVVDFKSLSNPI----------------------------------------------------------- 610 (951)
T ss_pred CCceecceEEEEEEEecCCcc-----------------------------------------------------------
Confidence 999999999999886544310
Q ss_pred CCCChHHHHHHHHHHhhhccceeccCCCCCceEEecCCccHHHHHHHHHHcCcEEEeecCCeeEEEecCCCCccccceEE
Q 001008 508 NEPHSDVIQKFFRVLAICHTAIPDVNEETGEISYEAESPDEAAFVIAAREVGFQFFGSSQTSISLHELDPVSGQKVNRVY 587 (1191)
Q Consensus 508 ~~~~~~~~~~~~~~lalC~~~~~~~~~~~~~~~y~~~sp~e~Alv~~a~~~g~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 587 (1191)
..++++...+. .+-.++||...|++++|++.+-. ++...+....
T Consensus 611 ------~~~e~l~~v~a--------------~Es~SeHPig~AIv~yak~~~~~-----~~~~~~~~~~----------- 654 (951)
T KOG0207|consen 611 ------SLKEALALVAA--------------MESGSEHPIGKAIVDYAKEKLVE-----PNPEGVLSFE----------- 654 (951)
T ss_pred ------cHHHHHHHHHH--------------HhcCCcCchHHHHHHHHHhcccc-----cCccccceee-----------
Confidence 01122222221 12235799999999999987611 1111111111
Q ss_pred EEeEeecccCCCceEEEEEEcCCCcEEEEEeccchHHHHHHhhcChhhHHHHHHHHHHHHhccceEEEEEEEecCHHHHH
Q 001008 588 ELLHVLEFTSSRKRMSVMVRNPENQLLLLCKGADSVMFERLSKHGQQFEAETRRHINRYAEAGLRTLVIAYRELGEDEYR 667 (1191)
Q Consensus 588 ~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~l~~~a~~GlR~L~~A~r~l~~~~~~ 667 (1191)
.|..+.+...+.+. ++- .+-|.-+.| .+.+....++++..+++....|..+.++|
T Consensus 655 ------~~pg~g~~~~~~~~---~~~--i~iGN~~~~----~r~~~~~~~~i~~~~~~~e~~g~tvv~v~---------- 709 (951)
T KOG0207|consen 655 ------YFPGEGIYVTVTVD---GNE--VLIGNKEWM----SRNGCSIPDDILDALTESERKGQTVVYVA---------- 709 (951)
T ss_pred ------cccCCCcccceEEe---eeE--EeechHHHH----HhcCCCCchhHHHhhhhHhhcCceEEEEE----------
Confidence 12111111111111 211 223554333 23333345667888888899999999999
Q ss_pred HHHHHHHHHhhcchhhHHHHHHHHHHHhhccceEEEeeeecccccCCcHHHHHHHHHcCCeEEEEeCCCHhhHHHHHHHc
Q 001008 668 IWEKEFLKAKTSVTSDREALVASAAEKIERDLILLGATAVEDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYAC 747 (1191)
Q Consensus 668 ~~~~~~~~a~~~l~~~r~~~~~~~~~~iE~dl~llG~~~ieD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~ 747 (1191)
.|-++.|+++++|++|+|+..+|+.||+.||++.|+||||..||.++|+++
T Consensus 710 -----------------------------vn~~l~gv~~l~D~vr~~a~~av~~Lk~~Gi~v~mLTGDn~~aA~svA~~V 760 (951)
T KOG0207|consen 710 -----------------------------VNGQLVGVFALEDQVRPDAALAVAELKSMGIKVVMLTGDNDAAARSVAQQV 760 (951)
T ss_pred -----------------------------ECCEEEEEEEeccccchhHHHHHHHHHhcCceEEEEcCCCHHHHHHHHHhh
Confidence 588999999999999999999999999999999999999999999999999
Q ss_pred CccccCceEEEEecCCchhhhhhhhcchHHHHHHHHHHHHHHHHhhcccccccccccceeEEEEeCchhhHHhHHHHHHH
Q 001008 748 SLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKM 827 (1191)
Q Consensus 748 gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~ 827 (1191)
|+-
T Consensus 761 Gi~----------------------------------------------------------------------------- 763 (951)
T KOG0207|consen 761 GID----------------------------------------------------------------------------- 763 (951)
T ss_pred Ccc-----------------------------------------------------------------------------
Confidence 961
Q ss_pred HHHHHhhcCceEEEcCChhhHHHHHHHhhcCCCEEEEEcCCccChHhhhhcceeEEec-cCccchhhhccceeccchh--
Q 001008 828 FLDLAIDCASVICCRSSPKQKALVTRLVKGTGKTTLAIGDGANDVGMLQEADIGVGIS-GVEGMQAVMSSDYAIAQFR-- 904 (1191)
Q Consensus 828 ~~~l~~~~~~~v~~r~sP~qK~~iV~~l~~~g~~vl~iGDG~ND~~ml~~AdvGI~i~-g~e~~~a~~~aD~vl~~f~-- 904 (1191)
.|+|.+.|+||.++|+.+|+.++.|+|+|||.||+|+|.+|||||+|. |++. |.++||++++..+
T Consensus 764 ----------~V~aev~P~~K~~~Ik~lq~~~~~VaMVGDGINDaPALA~AdVGIaig~gs~v--AieaADIVLmrn~L~ 831 (951)
T KOG0207|consen 764 ----------NVYAEVLPEQKAEKIKEIQKNGGPVAMVGDGINDAPALAQADVGIAIGAGSDV--AIEAADIVLMRNDLR 831 (951)
T ss_pred ----------eEEeccCchhhHHHHHHHHhcCCcEEEEeCCCCccHHHHhhccceeeccccHH--HHhhCCEEEEccchh
Confidence 299999999999999999999999999999999999999999999994 4555 9999999999743
Q ss_pred hhhHhhhhhchhhhhHhhHhHHHHHHhHHHHHHHH
Q 001008 905 FLERLLLVHGHWCYRRISMMICYFFYKNLTFGFTL 939 (1191)
Q Consensus 905 ~l~~lll~~GR~~~~~i~~~i~~~~~~n~~~~~~~ 939 (1191)
.+... +..+|+..+|++.++.|.+.+|++.+.+.
T Consensus 832 ~v~~a-i~LSrkt~~rIk~N~~~A~~yn~~~IpIA 865 (951)
T KOG0207|consen 832 DVPFA-IDLSRKTVKRIKLNFVWALIYNLVGIPIA 865 (951)
T ss_pred hhHHH-HHHHHHHHhhHHHHHHHHHHHHHhhhhhh
Confidence 35555 88999999999999999999998865443
No 29
>TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase. This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512.
Probab=100.00 E-value=8.1e-59 Score=566.64 Aligned_cols=501 Identities=21% Similarity=0.222 Sum_probs=387.6
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHHhhhHHHH---hcceEEEEecCC-eEEEEeccccccccEEEEeCCCcccceEEEEe
Q 001008 104 PSVLAPLIVVIGATMAKEGVEDWRRRKQDIEA---NNRKVKVYGQDH-TFVETKWKNLRVGDLVKVHKDEYFPADLLLLS 179 (1191)
Q Consensus 104 ~~~~~~l~~vl~~~~i~~~~~d~~r~k~~~~~---n~~~~~V~r~~g-~~~~i~~~~L~vGDIV~l~~ge~iPaD~~lL~ 179 (1191)
|.....++++++++...+.+.+++..+..+++ ++..++|+| +| +++++++++|+|||+|.|++||.|||||++++
T Consensus 18 ~~~~~~i~~~~~~~~~i~~~~~~~~~~~l~~l~~~~~~~~~v~r-~~g~~~~i~~~~l~~GDiv~v~~G~~iP~Dg~vi~ 96 (556)
T TIGR01525 18 VLEGALLLFLFLLGETLEERAKGRASDALSALLALAPSTARVLQ-GDGSEEEVPVEELQVGDIVIVRPGERIPVDGVVIS 96 (556)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEE-CCCeEEEEEHHHCCCCCEEEECCCCEeccceEEEe
Confidence 33444455555555555555544444443333 467899999 75 99999999999999999999999999999999
Q ss_pred eeCCCceEEEEeccCCcccccEeecchhhhcccCChhhhcccceEEEeecCCCCceeeEEEEEEcCeeeccCCCceeecC
Q 001008 180 SIYEDGICYVETMNLDGETNLKLKRSLEATNHLRDEESFQKFTAVIKCEDPNERLYSFVGTLQYEGKQYPLSPQQILLRD 259 (1191)
Q Consensus 180 ss~~~g~~~Vd~s~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~~~i~~e~pn~~~~~f~Gt~~~~g~~~~l~~~n~l~rg 259 (1191)
|.+.||||.|||||.|+.|.+++.. |+||.+.+|.
T Consensus 97 -----g~~~vdes~lTGEs~pv~k~~g~~v---------------------------~aGt~v~~g~------------- 131 (556)
T TIGR01525 97 -----GESEVDESALTGESMPVEKKEGDEV---------------------------FAGTINGDGS------------- 131 (556)
T ss_pred -----cceEEeehhccCCCCCEecCCcCEE---------------------------eeceEECCce-------------
Confidence 5689999999999999999987644 9999999998
Q ss_pred cEeecCCeEEEEEEEecchhhHh---hccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcccccCCCcccc
Q 001008 260 SKLKNTDYVYGVVVFTGHDTKVM---QNATDPPSKRSKIERKMDKIVYLLFSTLILISSTGSVFFGIETKRDIDGGKIRR 336 (1191)
Q Consensus 260 s~l~nt~~~~gvVv~tG~~Tki~---~~~~~~~~k~s~l~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~ 336 (1191)
++++|+.||.+|++. .....++.+++++++.+++++.++.++.++++++.++++.+...
T Consensus 132 --------~~~~v~~~g~~t~~~~i~~~~~~~~~~~~~~~~~~~~~a~~~~~~~l~~a~~~~~~~~~~~~---------- 193 (556)
T TIGR01525 132 --------LTIRVTKLGEDSTLAQIVKLVEEAQSSKAPIQRLADRIASYYVPAVLAIALLTFVVWLALGA---------- 193 (556)
T ss_pred --------EEEEEEEecccCHHHHHHHHHHHHhhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc----------
Confidence 999999999999653 33445566789999999999999999888888877766543210
Q ss_pred ccccCCCCCcccCCCCchhHHHHHHHHHHHHhhccccchhhhHHHHHHHHHHHHHhhcccccccCCCCCccccCcccccc
Q 001008 337 WYLQPDDATVFYDPRRAPLAAFLHFLTGLMLYGYLIPISLYISIEIVKVLQSVFINHDRDMYYEDTDKPARARTSNLNEE 416 (1191)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ll~~~iP~sL~v~~~~~~~~~~~~i~~d~~m~~~~~~~~~~v~~~~~~e~ 416 (1191)
+ ..+..++.+++..||++|+++++++...+..++ .++++++|+++.+|.
T Consensus 194 ~---------------------~~~~~~~~vlv~~~P~al~l~~~~~~~~~~~~~----------~~~gilvk~~~~le~ 242 (556)
T TIGR01525 194 L---------------------GALYRALAVLVVACPCALGLATPVAILVAIGVA----------ARRGILIKGGDALEK 242 (556)
T ss_pred c---------------------hHHHHHHHHHhhccccchhehhHHHHHHHHHHH----------HHCCceecCchHHHH
Confidence 0 268889999999999999999999999998887 789999999999999
Q ss_pred ccceeEEEecCCCccccceeEEEEEEEcCeeeccchhHHHHHHHHhhCCcccccCCCCCCCCCCCCccccCCCccCCccc
Q 001008 417 LGQVDTILSDKTGTLTCNSMEFVKCSVAGVAYGRVMTEVERTLAKRKGERTFEVDDSQTDAPGLNGNIVESGKSVKGFNF 496 (1191)
Q Consensus 417 Lg~v~~i~~DKTGTLT~n~m~~~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~ 496 (1191)
||++|++|||||||||+|+|++.++...+... .
T Consensus 243 l~~v~~i~fDKTGTLT~~~~~v~~~~~~~~~~-~---------------------------------------------- 275 (556)
T TIGR01525 243 LAKVKTVVFDKTGTLTTGKPTVVDVEPLDDAS-I---------------------------------------------- 275 (556)
T ss_pred hhcCCEEEEeCCCCCcCCceEEEEEEecCCCC-c----------------------------------------------
Confidence 99999999999999999999999886432110 0
Q ss_pred CChhhhcccCCCCCChHHHHHHHHHHhhhccceeccCCCCCceEEecCCccHHHHHHHHHHcCcEEEeecCCeeEEEecC
Q 001008 497 RDERIMNGQWVNEPHSDVIQKFFRVLAICHTAIPDVNEETGEISYEAESPDEAAFVIAAREVGFQFFGSSQTSISLHELD 576 (1191)
Q Consensus 497 ~~~~l~~~~~~~~~~~~~~~~~~~~lalC~~~~~~~~~~~~~~~y~~~sp~e~Alv~~a~~~g~~~~~~~~~~~~i~~~~ 576 (1191)
...+++. +|..+. ..+.||.+.|+++++++.|..... +
T Consensus 276 -----------------~~~~~l~---~a~~~e-----------~~~~hp~~~Ai~~~~~~~~~~~~~--~--------- 313 (556)
T TIGR01525 276 -----------------SEEELLA---LAAALE-----------QSSSHPLARAIVRYAKKRGLELPK--Q--------- 313 (556)
T ss_pred -----------------cHHHHHH---HHHHHh-----------ccCCChHHHHHHHHHHhcCCCccc--c---------
Confidence 0012222 222221 124699999999999987653211 0
Q ss_pred CCCccccceEEEEeEeecccCCCceEEEEEEcCCCcEEEEEeccchHHHHHHhhcChhhHHHHHHHHHHHHhccceEEEE
Q 001008 577 PVSGQKVNRVYELLHVLEFTSSRKRMSVMVRNPENQLLLLCKGADSVMFERLSKHGQQFEAETRRHINRYAEAGLRTLVI 656 (1191)
Q Consensus 577 ~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~l~~~a~~GlR~L~~ 656 (1191)
+ ....+ ..+.++..+ +|. .-+..|+++.+ + . .. ....+....++.++.+|+|++.+
T Consensus 314 ----------~-~~~~~----~~~gi~~~~---~g~-~~~~lg~~~~~-~-~--~~-~~~~~~~~~~~~~~~~g~~~~~v 369 (556)
T TIGR01525 314 ----------E-DVEEV----PGKGVEATV---DGQ-EEVRIGNPRLL-E-L--AA-EPISASPDLLNEGESQGKTVVFV 369 (556)
T ss_pred ----------c-CeeEe----cCCeEEEEE---CCe-eEEEEecHHHH-h-h--cC-CCchhhHHHHHHHhhCCcEEEEE
Confidence 0 00000 111222222 121 12334666544 1 1 11 11223345677888999999999
Q ss_pred EEEecCHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHHhhccceEEEeeeecccccCCcHHHHHHHHHcC-CeEEEEeCC
Q 001008 657 AYRELGEDEYRIWEKEFLKAKTSVTSDREALVASAAEKIERDLILLGATAVEDKLQKGVPECIDKLAQAG-IKVWVLTGD 735 (1191)
Q Consensus 657 A~r~l~~~~~~~~~~~~~~a~~~l~~~r~~~~~~~~~~iE~dl~llG~~~ieD~lr~~v~~~I~~L~~aG-Ikv~mlTGD 735 (1191)
| .|.+++|.+.++|+++||++++|+.|+++| ++++|+|||
T Consensus 370 ~---------------------------------------~~~~~~g~i~~~d~~~~g~~e~l~~L~~~g~i~v~ivTgd 410 (556)
T TIGR01525 370 A---------------------------------------VDGELLGVIALRDQLRPEAKEAIAALKRAGGIKLVMLTGD 410 (556)
T ss_pred E---------------------------------------ECCEEEEEEEecccchHhHHHHHHHHHHcCCCeEEEEeCC
Confidence 9 467899999999999999999999999999 999999999
Q ss_pred CHhhHHHHHHHcCccccCceEEEEecCCchhhhhhhhcchHHHHHHHHHHHHHHHHhhcccccccccccceeEEEEeCch
Q 001008 736 KMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQIREGISQVNSAKESKVTFGLVIDGKS 815 (1191)
Q Consensus 736 ~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~ 815 (1191)
+..++..+++++|+.
T Consensus 411 ~~~~a~~i~~~lgi~----------------------------------------------------------------- 425 (556)
T TIGR01525 411 NRSAAEAVAAELGID----------------------------------------------------------------- 425 (556)
T ss_pred CHHHHHHHHHHhCCC-----------------------------------------------------------------
Confidence 999999999999982
Q ss_pred hhHHhHHHHHHHHHHHHhhcCceEEEcCChhhHHHHHHHhhcCCCEEEEEcCCccChHhhhhcceeEEeccCccchhhhc
Q 001008 816 LDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLVKGTGKTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMS 895 (1191)
Q Consensus 816 l~~~~~~~~~~~~~~l~~~~~~~v~~r~sP~qK~~iV~~l~~~g~~vl~iGDG~ND~~ml~~AdvGI~i~g~e~~~a~~~ 895 (1191)
.+|+++.|++|..+++.++..++.|+|+|||.||++|+++||+||++. .....++..
T Consensus 426 ----------------------~~f~~~~p~~K~~~v~~l~~~~~~v~~vGDg~nD~~al~~A~vgia~g-~~~~~~~~~ 482 (556)
T TIGR01525 426 ----------------------EVHAELLPEDKLAIVKELQEEGGVVAMVGDGINDAPALAAADVGIAMG-AGSDVAIEA 482 (556)
T ss_pred ----------------------eeeccCCHHHHHHHHHHHHHcCCEEEEEECChhHHHHHhhCCEeEEeC-CCCHHHHHh
Confidence 177788999999999999878889999999999999999999999985 333337789
Q ss_pred cceeccc--hhhhhHhhhhhchhhhhHhhHhHHHHHHhHHHHHHHHH
Q 001008 896 SDYAIAQ--FRFLERLLLVHGHWCYRRISMMICYFFYKNLTFGFTLF 940 (1191)
Q Consensus 896 aD~vl~~--f~~l~~lll~~GR~~~~~i~~~i~~~~~~n~~~~~~~~ 940 (1191)
||+++.+ +..+..+ +..||..++++++.+.|.+..|++.+.+.+
T Consensus 483 Ad~vi~~~~~~~l~~~-i~~~r~~~~~i~~nl~~a~~~N~~~i~~a~ 528 (556)
T TIGR01525 483 ADIVLLNDDLSSLPTA-IDLSRKTRRIIKQNLAWALGYNLVAIPLAA 528 (556)
T ss_pred CCEEEeCCCHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999995 6668888 899999999999999999999998875544
No 30
>TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase. .
Probab=100.00 E-value=2.4e-57 Score=549.76 Aligned_cols=481 Identities=21% Similarity=0.234 Sum_probs=376.8
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHHhhhHHH---HhcceEEEEecCCeEEEEeccccccccEEEEeCCCcccceEEEEee
Q 001008 104 PSVLAPLIVVIGATMAKEGVEDWRRRKQDIE---ANNRKVKVYGQDHTFVETKWKNLRVGDLVKVHKDEYFPADLLLLSS 180 (1191)
Q Consensus 104 ~~~~~~l~~vl~~~~i~~~~~d~~r~k~~~~---~n~~~~~V~r~~g~~~~i~~~~L~vGDIV~l~~ge~iPaD~~lL~s 180 (1191)
|.....++++++++...+.+.+++..+..+. +++.+++|+| ||+++++++++|+|||+|.|++||.|||||++++
T Consensus 18 ~~~~~~i~~~~~~~~~l~~~~~~~a~~~l~~l~~~~~~~~~v~r-~g~~~~i~~~~l~~GDiv~v~~G~~iP~Dg~ii~- 95 (536)
T TIGR01512 18 YLEGALLLLLFSIGETLEEYASGRARRALKALMELAPDTARVLR-GGSLEEVAVEELKVGDVVVVKPGERVPVDGVVLS- 95 (536)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEE-CCEEEEEEHHHCCCCCEEEEcCCCEeecceEEEe-
Confidence 3333445555555555555555444444333 3578999999 9999999999999999999999999999999999
Q ss_pred eCCCceEEEEeccCCcccccEeecchhhhcccCChhhhcccceEEEeecCCCCceeeEEEEEEcCeeeccCCCceeecCc
Q 001008 181 IYEDGICYVETMNLDGETNLKLKRSLEATNHLRDEESFQKFTAVIKCEDPNERLYSFVGTLQYEGKQYPLSPQQILLRDS 260 (1191)
Q Consensus 181 s~~~g~~~Vd~s~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~~~i~~e~pn~~~~~f~Gt~~~~g~~~~l~~~n~l~rgs 260 (1191)
|.+.||||+|||||.|+.|.+++.. |+||.+.+|.
T Consensus 96 ----g~~~vdes~lTGEs~pv~k~~g~~v---------------------------~aGt~v~~G~-------------- 130 (536)
T TIGR01512 96 ----GTSTVDESALTGESVPVEKAPGDEV---------------------------FAGAINLDGV-------------- 130 (536)
T ss_pred ----CcEEEEecccCCCCCcEEeCCCCEE---------------------------EeeeEECCce--------------
Confidence 5689999999999999999987644 9999999998
Q ss_pred EeecCCeEEEEEEEecchhhH---hhccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcccccCCCccccc
Q 001008 261 KLKNTDYVYGVVVFTGHDTKV---MQNATDPPSKRSKIERKMDKIVYLLFSTLILISSTGSVFFGIETKRDIDGGKIRRW 337 (1191)
Q Consensus 261 ~l~nt~~~~gvVv~tG~~Tki---~~~~~~~~~k~s~l~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~ 337 (1191)
++++|+.||.+|.+ ......+..+++++++.+++++.++.+++++++++.++++.+... |
T Consensus 131 -------~~~~V~~~g~~t~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~ 193 (536)
T TIGR01512 131 -------LTIVVTKLPADSTIAKIVNLVEEAQSRKAKTQRFIDRFARYYTPVVLAIALAIWLVPGLLKR----------W 193 (536)
T ss_pred -------EEEEEEEeccccHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc----------c
Confidence 99999999999965 344455566789999999999999999888888777665432210 1
Q ss_pred cccCCCCCcccCCCCchhHHHHHHHHHHHHhhccccchhhhHHHHHHHHHHHHHhhcccccccCCCCCccccCccccccc
Q 001008 338 YLQPDDATVFYDPRRAPLAAFLHFLTGLMLYGYLIPISLYISIEIVKVLQSVFINHDRDMYYEDTDKPARARTSNLNEEL 417 (1191)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ll~~~iP~sL~v~~~~~~~~~~~~i~~d~~m~~~~~~~~~~v~~~~~~e~L 417 (1191)
...+.+++.+++.+|||+|+++++++...+..++ .++++++|+++.+|.|
T Consensus 194 --------------------~~~~~~~~svlv~~~P~aL~la~~~~~~~~~~~~----------~k~gilik~~~~le~l 243 (536)
T TIGR01512 194 --------------------PFWVYRALVLLVVASPCALVISAPAAYLSAISAA----------ARHGILIKGGAALEAL 243 (536)
T ss_pred --------------------HHHHHHHHHHHhhcCccccccchHHHHHHHHHHH----------HHCCeEEcCcHHHHhh
Confidence 1167778899999999999999999999988877 7899999999999999
Q ss_pred cceeEEEecCCCccccceeEEEEEEEcCeeeccchhHHHHHHHHhhCCcccccCCCCCCCCCCCCccccCCCccCCcccC
Q 001008 418 GQVDTILSDKTGTLTCNSMEFVKCSVAGVAYGRVMTEVERTLAKRKGERTFEVDDSQTDAPGLNGNIVESGKSVKGFNFR 497 (1191)
Q Consensus 418 g~v~~i~~DKTGTLT~n~m~~~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~ 497 (1191)
|+++++|||||||||+|+|++.++...
T Consensus 244 ~~v~~i~fDKTGTLT~~~~~v~~~~~~----------------------------------------------------- 270 (536)
T TIGR01512 244 AKIKTVAFDKTGTLTTGRPKVVDVVPA----------------------------------------------------- 270 (536)
T ss_pred cCCCEEEECCCCCCcCCceEEEEeeHH-----------------------------------------------------
Confidence 999999999999999999999876310
Q ss_pred ChhhhcccCCCCCChHHHHHHHHHHhhhccceeccCCCCCceEEecCCccHHHHHHHHHHcCcEEEeecCCeeEEEecCC
Q 001008 498 DERIMNGQWVNEPHSDVIQKFFRVLAICHTAIPDVNEETGEISYEAESPDEAAFVIAAREVGFQFFGSSQTSISLHELDP 577 (1191)
Q Consensus 498 ~~~l~~~~~~~~~~~~~~~~~~~~lalC~~~~~~~~~~~~~~~y~~~sp~e~Alv~~a~~~g~~~~~~~~~~~~i~~~~~ 577 (1191)
+++...+.+ +..+.||.+.|+++++++.+ .+.
T Consensus 271 -------------------~~l~~a~~~--------------e~~~~hp~~~Ai~~~~~~~~-~~~-------------- 302 (536)
T TIGR01512 271 -------------------EVLRLAAAA--------------EQASSHPLARAIVDYARKRE-NVE-------------- 302 (536)
T ss_pred -------------------HHHHHHHHH--------------hccCCCcHHHHHHHHHHhcC-CCc--------------
Confidence 122222211 11246999999999998754 000
Q ss_pred CCccccceEEEEeEeecccCCCceEEEEEEcCCCcEEEEEeccchHHHHHHhhcChhhHHHHHHHHHHHHhccceEEEEE
Q 001008 578 VSGQKVNRVYELLHVLEFTSSRKRMSVMVRNPENQLLLLCKGADSVMFERLSKHGQQFEAETRRHINRYAEAGLRTLVIA 657 (1191)
Q Consensus 578 ~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~l~~~a~~GlR~L~~A 657 (1191)
.. ..+| .+.+...+ +|..+ ..|+++.+.+. + ...+..+|.+++.++
T Consensus 303 --------~~---~~~~----g~gi~~~~---~g~~~--~ig~~~~~~~~----~----------~~~~~~~~~~~~~v~ 348 (536)
T TIGR01512 303 --------SV---EEVP----GEGVRAVV---DGGEV--RIGNPRSLEAA----V----------GARPESAGKTIVHVA 348 (536)
T ss_pred --------ce---EEec----CCeEEEEE---CCeEE--EEcCHHHHhhc----C----------CcchhhCCCeEEEEE
Confidence 00 0011 11222222 23322 24776544221 1 114566788887776
Q ss_pred EEecCHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHHhhccceEEEeeeecccccCCcHHHHHHHHHcCC-eEEEEeCCC
Q 001008 658 YRELGEDEYRIWEKEFLKAKTSVTSDREALVASAAEKIERDLILLGATAVEDKLQKGVPECIDKLAQAGI-KVWVLTGDK 736 (1191)
Q Consensus 658 ~r~l~~~~~~~~~~~~~~a~~~l~~~r~~~~~~~~~~iE~dl~llG~~~ieD~lr~~v~~~I~~L~~aGI-kv~mlTGD~ 736 (1191)
.|..++|.+.++|+++||++++|+.|+++|+ +++|+|||+
T Consensus 349 ---------------------------------------~~~~~~g~i~~~d~l~~~~~e~i~~L~~~Gi~~v~vvTgd~ 389 (536)
T TIGR01512 349 ---------------------------------------RDGTYLGYILLSDEPRPDAAEAIAELKALGIEKVVMLTGDR 389 (536)
T ss_pred ---------------------------------------ECCEEEEEEEEeccchHHHHHHHHHHHHcCCCcEEEEcCCC
Confidence 5789999999999999999999999999999 999999999
Q ss_pred HhhHHHHHHHcCccccCceEEEEecCCchhhhhhhhcchHHHHHHHHHHHHHHHHhhcccccccccccceeEEEEeCchh
Q 001008 737 METAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQIREGISQVNSAKESKVTFGLVIDGKSL 816 (1191)
Q Consensus 737 ~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l 816 (1191)
..+|..+++++|+.
T Consensus 390 ~~~a~~i~~~lgi~------------------------------------------------------------------ 403 (536)
T TIGR01512 390 RAVAERVARELGID------------------------------------------------------------------ 403 (536)
T ss_pred HHHHHHHHHHcCCh------------------------------------------------------------------
Confidence 99999999999982
Q ss_pred hHHhHHHHHHHHHHHHhhcCceEEEcCChhhHHHHHHHhhcCCCEEEEEcCCccChHhhhhcceeEEeccCccchhhhcc
Q 001008 817 DFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLVKGTGKTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSS 896 (1191)
Q Consensus 817 ~~~~~~~~~~~~~~l~~~~~~~v~~r~sP~qK~~iV~~l~~~g~~vl~iGDG~ND~~ml~~AdvGI~i~g~e~~~a~~~a 896 (1191)
.+|+++.|++|..+++.++..++.|+|+|||.||++|+++||+||++.......+..+|
T Consensus 404 ---------------------~~f~~~~p~~K~~~i~~l~~~~~~v~~vGDg~nD~~al~~A~vgia~g~~~~~~~~~~a 462 (536)
T TIGR01512 404 ---------------------EVHAELLPEDKLEIVKELREKYGPVAMVGDGINDAPALAAADVGIAMGASGSDVAIETA 462 (536)
T ss_pred ---------------------hhhhccCcHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHhCCEEEEeCCCccHHHHHhC
Confidence 15667889999999999988889999999999999999999999998522233378899
Q ss_pred ceecc--chhhhhHhhhhhchhhhhHhhHhHHHHHHhHHHHHHHHH
Q 001008 897 DYAIA--QFRFLERLLLVHGHWCYRRISMMICYFFYKNLTFGFTLF 940 (1191)
Q Consensus 897 D~vl~--~f~~l~~lll~~GR~~~~~i~~~i~~~~~~n~~~~~~~~ 940 (1191)
|+++. +++.+..+ +..||..++++++++.|.+..|++.+.+.+
T Consensus 463 d~vl~~~~l~~l~~~-i~~~r~~~~~i~~nl~~a~~~n~~~i~~a~ 507 (536)
T TIGR01512 463 DVVLLNDDLSRLPQA-IRLARRTRRIVKQNVVIALGIILLLILLAL 507 (536)
T ss_pred CEEEECCCHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99994 57778887 899999999999999999999987766554
No 31
>TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase. One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification.
Probab=100.00 E-value=4e-57 Score=549.37 Aligned_cols=472 Identities=21% Similarity=0.259 Sum_probs=373.6
Q ss_pred HHHHHHHHHHHhhhHH------HHhcceEEEEecCCeEEEEeccccccccEEEEeCCCcccceEEEEeeeCCCceEEEEe
Q 001008 118 MAKEGVEDWRRRKQDI------EANNRKVKVYGQDHTFVETKWKNLRVGDLVKVHKDEYFPADLLLLSSIYEDGICYVET 191 (1191)
Q Consensus 118 ~i~~~~~d~~r~k~~~------~~n~~~~~V~r~~g~~~~i~~~~L~vGDIV~l~~ge~iPaD~~lL~ss~~~g~~~Vd~ 191 (1191)
.+-+++|++.++|+.+ ++.+.+++++|.+|.+++|+.++|+|||+|.|++||.|||||++++ |.+.|||
T Consensus 65 ~~g~~le~~~~~~a~~~~~~L~~~~p~~a~~~~~~~~~~~v~~~~l~~GDii~v~~Ge~iP~Dg~v~~-----g~~~vde 139 (562)
T TIGR01511 65 LLGRWLEMLAKGRASDALSKLAKLQPSTATLLTKDGSIEEVPVALLQPGDIVKVLPGEKIPVDGTVIE-----GESEVDE 139 (562)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEECCCeEEEEEHHHCCCCCEEEECCCCEecCceEEEE-----CceEEeh
Confidence 3345555555544433 2346889999845778999999999999999999999999999999 6689999
Q ss_pred ccCCcccccEeecchhhhcccCChhhhcccceEEEeecCCCCceeeEEEEEEcCeeeccCCCceeecCcEeecCCeEEEE
Q 001008 192 MNLDGETNLKLKRSLEATNHLRDEESFQKFTAVIKCEDPNERLYSFVGTLQYEGKQYPLSPQQILLRDSKLKNTDYVYGV 271 (1191)
Q Consensus 192 s~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~~~i~~e~pn~~~~~f~Gt~~~~g~~~~l~~~n~l~rgs~l~nt~~~~gv 271 (1191)
|.|||||.|+.|++++.. |+||++.+|. +.+.
T Consensus 140 s~lTGEs~pv~k~~gd~V---------------------------~aGt~~~~g~---------------------~~~~ 171 (562)
T TIGR01511 140 SLVTGESLPVPKKVGDPV---------------------------IAGTVNGTGS---------------------LVVR 171 (562)
T ss_pred HhhcCCCCcEEcCCCCEE---------------------------EeeeEECCce---------------------EEEE
Confidence 999999999999988755 9999999998 9999
Q ss_pred EEEecchhhH---hhccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcccccCCCccccccccCCCCCccc
Q 001008 272 VVFTGHDTKV---MQNATDPPSKRSKIERKMDKIVYLLFSTLILISSTGSVFFGIETKRDIDGGKIRRWYLQPDDATVFY 348 (1191)
Q Consensus 272 Vv~tG~~Tki---~~~~~~~~~k~s~l~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 348 (1191)
|+.||.+|.+ ......++.+++++++.+++++.++.+++++++++.+++|.
T Consensus 172 v~~~g~~t~~~~i~~~v~~a~~~k~~~~~~~d~~a~~~~~~v~~~a~~~~~~~~-------------------------- 225 (562)
T TIGR01511 172 ATATGEDTTLAQIVRLVRQAQQSKAPIQRLADKVAGYFVPVVIAIALITFVIWL-------------------------- 225 (562)
T ss_pred EEEecCCChHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHH--------------------------
Confidence 9999999954 44555677788999999999999999888888877665532
Q ss_pred CCCCchhHHHHHHHHHHHHhhccccchhhhHHHHHHHHHHHHHhhcccccccCCCCCccccCccccccccceeEEEecCC
Q 001008 349 DPRRAPLAAFLHFLTGLMLYGYLIPISLYISIEIVKVLQSVFINHDRDMYYEDTDKPARARTSNLNEELGQVDTILSDKT 428 (1191)
Q Consensus 349 ~~~~~~~~~~~~~~~~i~ll~~~iP~sL~v~~~~~~~~~~~~i~~d~~m~~~~~~~~~~v~~~~~~e~Lg~v~~i~~DKT 428 (1191)
..+.+++.+++..|||+|+++++++...+...+ +++|+++|+.+.+|.|+++|+||||||
T Consensus 226 ----------~~~~~~~svlvvacPcaL~la~p~a~~~~~~~a----------a~~gIlik~~~~lE~l~~v~~i~fDKT 285 (562)
T TIGR01511 226 ----------FALEFAVTVLIIACPCALGLATPTVIAVATGLA----------AKNGVLIKDGDALERAANIDTVVFDKT 285 (562)
T ss_pred ----------HHHHHHHHHHHHhccchhhhHHHHHHHHHHHHH----------HHCCeEEcChHHHHHhhCCCEEEECCC
Confidence 157788999999999999999999999988877 789999999999999999999999999
Q ss_pred CccccceeEEEEEEEcCeeeccchhHHHHHHHHhhCCcccccCCCCCCCCCCCCccccCCCccCCcccCChhhhcccCCC
Q 001008 429 GTLTCNSMEFVKCSVAGVAYGRVMTEVERTLAKRKGERTFEVDDSQTDAPGLNGNIVESGKSVKGFNFRDERIMNGQWVN 508 (1191)
Q Consensus 429 GTLT~n~m~~~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 508 (1191)
||||+|+|++..+...+..
T Consensus 286 GTLT~g~~~v~~i~~~~~~------------------------------------------------------------- 304 (562)
T TIGR01511 286 GTLTQGKPTVTDVHVFGDR------------------------------------------------------------- 304 (562)
T ss_pred CCCcCCCEEEEEEecCCCC-------------------------------------------------------------
Confidence 9999999999987532210
Q ss_pred CCChHHHHHHHHHHhhhccceeccCCCCCceEEecCCccHHHHHHHHHHcCcEEEeecCCeeEEEecCCCCccccceEEE
Q 001008 509 EPHSDVIQKFFRVLAICHTAIPDVNEETGEISYEAESPDEAAFVIAAREVGFQFFGSSQTSISLHELDPVSGQKVNRVYE 588 (1191)
Q Consensus 509 ~~~~~~~~~~~~~lalC~~~~~~~~~~~~~~~y~~~sp~e~Alv~~a~~~g~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 588 (1191)
. ..+++..++ ++ +..+.||.+.|+++++++.|.....- ..++
T Consensus 305 --~---~~~~l~~aa---~~-----------e~~s~HPia~Ai~~~~~~~~~~~~~~-------------------~~~~ 346 (562)
T TIGR01511 305 --D---RTELLALAA---AL-----------EAGSEHPLAKAIVSYAKEKGITLVEV-------------------SDFK 346 (562)
T ss_pred --C---HHHHHHHHH---HH-----------hccCCChHHHHHHHHHHhcCCCcCCC-------------------CCeE
Confidence 0 012222221 11 11246999999999998876532110 0010
Q ss_pred EeEeecccCCCceEEEEEEcCCCcEEEEEeccchHHHHHHhhcChhhHHHHHHHHHHHHhccceEEEEEEEecCHHHHHH
Q 001008 589 LLHVLEFTSSRKRMSVMVRNPENQLLLLCKGADSVMFERLSKHGQQFEAETRRHINRYAEAGLRTLVIAYRELGEDEYRI 668 (1191)
Q Consensus 589 il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~l~~~a~~GlR~L~~A~r~l~~~~~~~ 668 (1191)
.+ ..+.+...+ +|+ -+..|+++.+.+. +.. +..+..+|.+++.++
T Consensus 347 ---~~----~g~Gi~~~~---~g~--~~~iG~~~~~~~~----~~~--------~~~~~~~g~~~~~~~----------- 391 (562)
T TIGR01511 347 ---AI----PGIGVEGTV---EGT--KIQLGNEKLLGEN----AIK--------IDGKAEQGSTSVLVA----------- 391 (562)
T ss_pred ---EE----CCceEEEEE---CCE--EEEEECHHHHHhC----CCC--------CChhhhCCCEEEEEE-----------
Confidence 00 122222222 232 2345887765321 111 112357899998887
Q ss_pred HHHHHHHHhhcchhhHHHHHHHHHHHhhccceEEEeeeecccccCCcHHHHHHHHHcCCeEEEEeCCCHhhHHHHHHHcC
Q 001008 669 WEKEFLKAKTSVTSDREALVASAAEKIERDLILLGATAVEDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACS 748 (1191)
Q Consensus 669 ~~~~~~~a~~~l~~~r~~~~~~~~~~iE~dl~llG~~~ieD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~g 748 (1191)
.|.+++|+++++|+++||++++|+.|++.|++++|+|||+..++..+++++|
T Consensus 392 ----------------------------~~~~~~g~~~~~d~l~~~a~e~i~~Lk~~Gi~v~ilSgd~~~~a~~ia~~lg 443 (562)
T TIGR01511 392 ----------------------------VNGELAGVFALEDQLRPEAKEVIQALKRRGIEPVMLTGDNRKTAKAVAKELG 443 (562)
T ss_pred ----------------------------ECCEEEEEEEecccccHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHcC
Confidence 5789999999999999999999999999999999999999999999999999
Q ss_pred ccccCceEEEEecCCchhhhhhhhcchHHHHHHHHHHHHHHHHhhcccccccccccceeEEEEeCchhhHHhHHHHHHHH
Q 001008 749 LLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMF 828 (1191)
Q Consensus 749 l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~ 828 (1191)
+.
T Consensus 444 i~------------------------------------------------------------------------------ 445 (562)
T TIGR01511 444 IN------------------------------------------------------------------------------ 445 (562)
T ss_pred Cc------------------------------------------------------------------------------
Confidence 81
Q ss_pred HHHHhhcCceEEEcCChhhHHHHHHHhhcCCCEEEEEcCCccChHhhhhcceeEEeccCccchhhhccceecc--chhhh
Q 001008 829 LDLAIDCASVICCRSSPKQKALVTRLVKGTGKTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAIA--QFRFL 906 (1191)
Q Consensus 829 ~~l~~~~~~~v~~r~sP~qK~~iV~~l~~~g~~vl~iGDG~ND~~ml~~AdvGI~i~g~e~~~a~~~aD~vl~--~f~~l 906 (1191)
+++++.|++|.++++.++..++.|+|+|||.||++|+++||+||++... ...++.+||+++. +++.+
T Consensus 446 ----------~~~~~~p~~K~~~v~~l~~~~~~v~~VGDg~nD~~al~~A~vgia~g~g-~~~a~~~Advvl~~~~l~~l 514 (562)
T TIGR01511 446 ----------VRAEVLPDDKAALIKELQEKGRVVAMVGDGINDAPALAQADVGIAIGAG-TDVAIEAADVVLMRNDLNDV 514 (562)
T ss_pred ----------EEccCChHHHHHHHHHHHHcCCEEEEEeCCCccHHHHhhCCEEEEeCCc-CHHHHhhCCEEEeCCCHHHH
Confidence 4556789999999999987889999999999999999999999998532 2337889999997 46668
Q ss_pred hHhhhhhchhhhhHhhHhHHHHHHhHHHHHHHHH
Q 001008 907 ERLLLVHGHWCYRRISMMICYFFYKNLTFGFTLF 940 (1191)
Q Consensus 907 ~~lll~~GR~~~~~i~~~i~~~~~~n~~~~~~~~ 940 (1191)
..+ +..||..++++++++.|.+..|++.+.+.+
T Consensus 515 ~~~-i~lsr~~~~~i~qn~~~a~~~n~~~i~la~ 547 (562)
T TIGR01511 515 ATA-IDLSRKTLRRIKQNLLWAFGYNVIAIPIAA 547 (562)
T ss_pred HHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 888 899999999999999999999988665444
No 32
>PRK10671 copA copper exporting ATPase; Provisional
Probab=100.00 E-value=4.3e-55 Score=557.42 Aligned_cols=488 Identities=18% Similarity=0.195 Sum_probs=386.6
Q ss_pred HHHHHHHHHHHHHHHhhhHHHH------hcceEEEEecCCeEEEEeccccccccEEEEeCCCcccceEEEEeeeCCCceE
Q 001008 114 IGATMAKEGVEDWRRRKQDIEA------NNRKVKVYGQDHTFVETKWKNLRVGDLVKVHKDEYFPADLLLLSSIYEDGIC 187 (1191)
Q Consensus 114 l~~~~i~~~~~d~~r~k~~~~~------n~~~~~V~r~~g~~~~i~~~~L~vGDIV~l~~ge~iPaD~~lL~ss~~~g~~ 187 (1191)
+++..+-+++|.+-+.|+.+.+ .+.+++|+| +|++++|+.++|+|||+|.|++||+|||||++++ |.+
T Consensus 293 ~~~~~~g~~le~~~~~~~~~~~~~L~~l~p~~a~~~~-~~~~~~v~~~~l~~GD~v~v~~G~~iP~Dg~v~~-----g~~ 366 (834)
T PRK10671 293 IGLINLGHMLEARARQRSSKALEKLLDLTPPTARVVT-DEGEKSVPLADVQPGMLLRLTTGDRVPVDGEITQ-----GEA 366 (834)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEEEe-CCcEEEEEHHHcCCCCEEEEcCCCEeeeeEEEEE-----ceE
Confidence 3444455667777666664433 378899999 9999999999999999999999999999999999 669
Q ss_pred EEEeccCCcccccEeecchhhhcccCChhhhcccceEEEeecCCCCceeeEEEEEEcCeeeccCCCceeecCcEeecCCe
Q 001008 188 YVETMNLDGETNLKLKRSLEATNHLRDEESFQKFTAVIKCEDPNERLYSFVGTLQYEGKQYPLSPQQILLRDSKLKNTDY 267 (1191)
Q Consensus 188 ~Vd~s~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~~~i~~e~pn~~~~~f~Gt~~~~g~~~~l~~~n~l~rgs~l~nt~~ 267 (1191)
.||||.|||||.|+.|.+++.. |+||++.+|.
T Consensus 367 ~vdeS~lTGEs~pv~k~~gd~V---------------------------~aGt~~~~G~--------------------- 398 (834)
T PRK10671 367 WLDEAMLTGEPIPQQKGEGDSV---------------------------HAGTVVQDGS--------------------- 398 (834)
T ss_pred EEeehhhcCCCCCEecCCCCEE---------------------------Eecceeccee---------------------
Confidence 9999999999999999998765 9999999998
Q ss_pred EEEEEEEecchhhH---hhccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcccccCCCccccccccCCCC
Q 001008 268 VYGVVVFTGHDTKV---MQNATDPPSKRSKIERKMDKIVYLLFSTLILISSTGSVFFGIETKRDIDGGKIRRWYLQPDDA 344 (1191)
Q Consensus 268 ~~gvVv~tG~~Tki---~~~~~~~~~k~s~l~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (1191)
+.+.|+.||.+|.+ ....+.++..++++++.+++++.++.+++++++++++++|.+... +
T Consensus 399 ~~~~v~~~g~~t~l~~i~~lv~~a~~~k~~~~~~~d~~a~~~v~~v~~~a~~~~~~~~~~~~----------~------- 461 (834)
T PRK10671 399 VLFRASAVGSHTTLSRIIRMVRQAQSSKPEIGQLADKISAVFVPVVVVIALVSAAIWYFFGP----------A------- 461 (834)
T ss_pred EEEEEEEEcCcChHHHHHHHHHHHhccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC----------c-------
Confidence 99999999999954 445556667789999999999999999988888887776643210 0
Q ss_pred CcccCCCCchhHHHHHHHHHHHHhhccccchhhhHHHHHHHHHHHHHhhcccccccCCCCCccccCccccccccceeEEE
Q 001008 345 TVFYDPRRAPLAAFLHFLTGLMLYGYLIPISLYISIEIVKVLQSVFINHDRDMYYEDTDKPARARTSNLNEELGQVDTIL 424 (1191)
Q Consensus 345 ~~~~~~~~~~~~~~~~~~~~i~ll~~~iP~sL~v~~~~~~~~~~~~i~~d~~m~~~~~~~~~~v~~~~~~e~Lg~v~~i~ 424 (1191)
..+...+..++.+++.+|||+|+++++++...+..++ +++|+++|+.+.+|.||++|++|
T Consensus 462 ----------~~~~~~~~~a~~vlv~acPcaL~la~p~a~~~~~~~~----------a~~gilvk~~~~le~l~~v~~v~ 521 (834)
T PRK10671 462 ----------PQIVYTLVIATTVLIIACPCALGLATPMSIISGVGRA----------AEFGVLVRDADALQRASTLDTLV 521 (834)
T ss_pred ----------hHHHHHHHHHHHHHHHhcccchhhhHHHHHHHHHHHH----------HHCCeEEecHHHHHhhcCCCEEE
Confidence 0123367788999999999999999999999998887 88999999999999999999999
Q ss_pred ecCCCccccceeEEEEEEEcCeeeccchhHHHHHHHHhhCCcccccCCCCCCCCCCCCccccCCCccCCcccCChhhhcc
Q 001008 425 SDKTGTLTCNSMEFVKCSVAGVAYGRVMTEVERTLAKRKGERTFEVDDSQTDAPGLNGNIVESGKSVKGFNFRDERIMNG 504 (1191)
Q Consensus 425 ~DKTGTLT~n~m~~~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~ 504 (1191)
||||||||+|+|++.++...+.. +
T Consensus 522 fDKTGTLT~g~~~v~~~~~~~~~-----~--------------------------------------------------- 545 (834)
T PRK10671 522 FDKTGTLTEGKPQVVAVKTFNGV-----D--------------------------------------------------- 545 (834)
T ss_pred EcCCCccccCceEEEEEEccCCC-----C---------------------------------------------------
Confidence 99999999999999877532110 0
Q ss_pred cCCCCCChHHHHHHH-HHHhhhccceeccCCCCCceEEecCCccHHHHHHHHHHcCcEEEeecCCeeEEEecCCCCcccc
Q 001008 505 QWVNEPHSDVIQKFF-RVLAICHTAIPDVNEETGEISYEAESPDEAAFVIAAREVGFQFFGSSQTSISLHELDPVSGQKV 583 (1191)
Q Consensus 505 ~~~~~~~~~~~~~~~-~~lalC~~~~~~~~~~~~~~~y~~~sp~e~Alv~~a~~~g~~~~~~~~~~~~i~~~~~~~~~~~ 583 (1191)
..+++ .+.+++. .+.||.+.|++++++..+.. .
T Consensus 546 ----------~~~~l~~a~~~e~---------------~s~hp~a~Ai~~~~~~~~~~--~------------------- 579 (834)
T PRK10671 546 ----------EAQALRLAAALEQ---------------GSSHPLARAILDKAGDMTLP--Q------------------- 579 (834)
T ss_pred ----------HHHHHHHHHHHhC---------------CCCCHHHHHHHHHHhhCCCC--C-------------------
Confidence 00111 2223321 24799999999988643210 0
Q ss_pred ceEEEEeEeecccCCCceEEEEEEcCCCcEEEEEeccchHHHHHHhhcChhhHHHHHHHHHHHHhccceEEEEEEEecCH
Q 001008 584 NRVYELLHVLEFTSSRKRMSVMVRNPENQLLLLCKGADSVMFERLSKHGQQFEAETRRHINRYAEAGLRTLVIAYRELGE 663 (1191)
Q Consensus 584 ~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~l~~~a~~GlR~L~~A~r~l~~ 663 (1191)
...++.+. .+.+...+ +|+ .+.+|+++.+.+.. ...+.+...++.++.+|.+++.+|
T Consensus 580 ~~~~~~~~-------g~Gv~~~~---~g~--~~~~G~~~~~~~~~-----~~~~~~~~~~~~~~~~g~~~v~va------ 636 (834)
T PRK10671 580 VNGFRTLR-------GLGVSGEA---EGH--ALLLGNQALLNEQQ-----VDTKALEAEITAQASQGATPVLLA------ 636 (834)
T ss_pred cccceEec-------ceEEEEEE---CCE--EEEEeCHHHHHHcC-----CChHHHHHHHHHHHhCCCeEEEEE------
Confidence 01111100 01111111 343 24569988764311 112345566778889999999999
Q ss_pred HHHHHHHHHHHHHhhcchhhHHHHHHHHHHHhhccceEEEeeeecccccCCcHHHHHHHHHcCCeEEEEeCCCHhhHHHH
Q 001008 664 DEYRIWEKEFLKAKTSVTSDREALVASAAEKIERDLILLGATAVEDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINI 743 (1191)
Q Consensus 664 ~~~~~~~~~~~~a~~~l~~~r~~~~~~~~~~iE~dl~llG~~~ieD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~i 743 (1191)
.|..++|+++++|++|||++++|+.|++.|++++|+|||+..+|..+
T Consensus 637 ---------------------------------~~~~~~g~~~l~d~~r~~a~~~i~~L~~~gi~v~~~Tgd~~~~a~~i 683 (834)
T PRK10671 637 ---------------------------------VDGKAAALLAIRDPLRSDSVAALQRLHKAGYRLVMLTGDNPTTANAI 683 (834)
T ss_pred ---------------------------------ECCEEEEEEEccCcchhhHHHHHHHHHHCCCeEEEEcCCCHHHHHHH
Confidence 35679999999999999999999999999999999999999999999
Q ss_pred HHHcCccccCceEEEEecCCchhhhhhhhcchHHHHHHHHHHHHHHHHhhcccccccccccceeEEEEeCchhhHHhHHH
Q 001008 744 GYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQIREGISQVNSAKESKVTFGLVIDGKSLDFALDKK 823 (1191)
Q Consensus 744 a~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~ 823 (1191)
++++|+.
T Consensus 684 a~~lgi~------------------------------------------------------------------------- 690 (834)
T PRK10671 684 AKEAGID------------------------------------------------------------------------- 690 (834)
T ss_pred HHHcCCC-------------------------------------------------------------------------
Confidence 9999982
Q ss_pred HHHHHHHHHhhcCceEEEcCChhhHHHHHHHhhcCCCEEEEEcCCccChHhhhhcceeEEeccCccchhhhccceeccc-
Q 001008 824 LEKMFLDLAIDCASVICCRSSPKQKALVTRLVKGTGKTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAIAQ- 902 (1191)
Q Consensus 824 ~~~~~~~l~~~~~~~v~~r~sP~qK~~iV~~l~~~g~~vl~iGDG~ND~~ml~~AdvGI~i~g~e~~~a~~~aD~vl~~- 902 (1191)
.+++++.|++|.++++.++..++.|+|+|||.||++|++.||+||++.+ ....++++||+++.+
T Consensus 691 --------------~~~~~~~p~~K~~~i~~l~~~~~~v~~vGDg~nD~~al~~Agvgia~g~-g~~~a~~~ad~vl~~~ 755 (834)
T PRK10671 691 --------------EVIAGVLPDGKAEAIKRLQSQGRQVAMVGDGINDAPALAQADVGIAMGG-GSDVAIETAAITLMRH 755 (834)
T ss_pred --------------EEEeCCCHHHHHHHHHHHhhcCCEEEEEeCCHHHHHHHHhCCeeEEecC-CCHHHHHhCCEEEecC
Confidence 1777889999999999998888999999999999999999999999943 333388999999986
Q ss_pred -hhhhhHhhhhhchhhhhHhhHhHHHHHHhHHHHHHHH
Q 001008 903 -FRFLERLLLVHGHWCYRRISMMICYFFYKNLTFGFTL 939 (1191)
Q Consensus 903 -f~~l~~lll~~GR~~~~~i~~~i~~~~~~n~~~~~~~ 939 (1191)
+..+..+ +..||..++++++++.|.+.+|++.+.+.
T Consensus 756 ~~~~i~~~-i~l~r~~~~~i~~Nl~~a~~yn~~~i~~a 792 (834)
T PRK10671 756 SLMGVADA-LAISRATLRNMKQNLLGAFIYNSLGIPIA 792 (834)
T ss_pred CHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5558777 89999999999999999999998776544
No 33
>COG2216 KdpB High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.6e-50 Score=440.27 Aligned_cols=559 Identities=19% Similarity=0.225 Sum_probs=392.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhHHHHh----cceEEEEecCCeEEEEeccccccccEEEEeCCCcccceEEEEeeeCC
Q 001008 108 APLIVVIGATMAKEGVEDWRRRKQDIEAN----NRKVKVYGQDHTFVETKWKNLRVGDLVKVHKDEYFPADLLLLSSIYE 183 (1191)
Q Consensus 108 ~~l~~vl~~~~i~~~~~d~~r~k~~~~~n----~~~~~V~r~~g~~~~i~~~~L~vGDIV~l~~ge~iPaD~~lL~ss~~ 183 (1191)
+.|+|.+++.-+-|++.+-|-+.+-..+. ...+++++.+|+++.+++.+|+.||+|+|+.||.||+||.+++
T Consensus 70 ~~L~fTVlFANfaEa~AEGrgKAqAdsLr~~~~~~~A~~l~~~g~~~~v~st~Lk~gdiV~V~age~IP~DGeVIe---- 145 (681)
T COG2216 70 IILWFTVLFANFAEAVAEGRGKAQADSLRKTKTETIARLLRADGSIEMVPATELKKGDIVLVEAGEIIPSDGEVIE---- 145 (681)
T ss_pred HHHHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHhcCCCCeeeccccccccCCEEEEecCCCccCCCeEEe----
Confidence 44555566666667776655444422222 3456777756999999999999999999999999999999999
Q ss_pred CceEEEEeccCCcccccEeecchhhhcccCChhhhcccceEEEeecCCCCceeeEEEEEEcCeeeccCCCceeecCcEee
Q 001008 184 DGICYVETMNLDGETNLKLKRSLEATNHLRDEESFQKFTAVIKCEDPNERLYSFVGTLQYEGKQYPLSPQQILLRDSKLK 263 (1191)
Q Consensus 184 ~g~~~Vd~s~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~~~i~~e~pn~~~~~f~Gt~~~~g~~~~l~~~n~l~rgs~l~ 263 (1191)
|.++||||++||||.|+.|.++-..+.. -.||.++
T Consensus 146 -G~asVdESAITGESaPViresGgD~ssV------------------------tGgT~v~-------------------- 180 (681)
T COG2216 146 -GVASVDESAITGESAPVIRESGGDFSSV------------------------TGGTRVL-------------------- 180 (681)
T ss_pred -eeeecchhhccCCCcceeeccCCCcccc------------------------cCCcEEe--------------------
Confidence 7899999999999999999987543110 1233333
Q ss_pred cCCeEEEEEEEecchh---hHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcccccCCCcccccccc
Q 001008 264 NTDYVYGVVVFTGHDT---KVMQNATDPPSKRSKIERKMDKIVYLLFSTLILISSTGSVFFGIETKRDIDGGKIRRWYLQ 340 (1191)
Q Consensus 264 nt~~~~gvVv~tG~~T---ki~~~~~~~~~k~s~l~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~ 340 (1191)
++|+...++..--+| |+....+.+..+++|-|-.++.+...+.++.+ +++.+..-+..|....
T Consensus 181 -SD~l~irita~pG~sFlDrMI~LVEgA~R~KTPNEIAL~iLL~~LTliFL-~~~~Tl~p~a~y~~g~------------ 246 (681)
T COG2216 181 -SDWLKIRITANPGETFLDRMIALVEGAERQKTPNEIALTILLSGLTLIFL-LAVATLYPFAIYSGGG------------ 246 (681)
T ss_pred -eeeEEEEEEcCCCccHHHHHHHHhhchhccCChhHHHHHHHHHHHHHHHH-HHHHhhhhHHHHcCCC------------
Confidence 478998888888888 55666788888999999888877666543322 2222211111111100
Q ss_pred CCCCCcccCCCCchhHHHHHHHHHHHHhhccccchhhhHHHHHHHHHHHHHhhcccccccCCCCCccccCccccccccce
Q 001008 341 PDDATVFYDPRRAPLAAFLHFLTGLMLYGYLIPISLYISIEIVKVLQSVFINHDRDMYYEDTDKPARARTSNLNEELGQV 420 (1191)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~~~~~i~ll~~~iP~sL~v~~~~~~~~~~~~i~~d~~m~~~~~~~~~~v~~~~~~e~Lg~v 420 (1191)
-.....-+.|++.+||..+.-.++..-..++-++ .+.+++.++..++|..|.|
T Consensus 247 -----------------~~~i~~LiALlV~LIPTTIGgLLsAIGIAGMdRv----------~~~NViA~SGRAVEaaGDv 299 (681)
T COG2216 247 -----------------AASVTVLVALLVCLIPTTIGGLLSAIGIAGMDRV----------TQFNVIATSGRAVEAAGDV 299 (681)
T ss_pred -----------------CcCHHHHHHHHHHHhcccHHHHHHHhhhhhhhHh----------hhhceeecCcchhhhcCCc
Confidence 0134456778889999887775555555555444 7889999999999999999
Q ss_pred eEEEecCCCccccceeEEEEEEEcCeeeccchhHHHHHHHHhhCCcccccCCCCCCCCCCCCccccCCCccCCcccCChh
Q 001008 421 DTILSDKTGTLTCNSMEFVKCSVAGVAYGRVMTEVERTLAKRKGERTFEVDDSQTDAPGLNGNIVESGKSVKGFNFRDER 500 (1191)
Q Consensus 421 ~~i~~DKTGTLT~n~m~~~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 500 (1191)
|++..|||||+|-|+=.-...+..+.
T Consensus 300 dtliLDKTGTIT~GnR~A~~f~p~~g------------------------------------------------------ 325 (681)
T COG2216 300 DTLLLDKTGTITLGNRQASEFIPVPG------------------------------------------------------ 325 (681)
T ss_pred cEEEecccCceeecchhhhheecCCC------------------------------------------------------
Confidence 99999999999977644333221110
Q ss_pred hhcccCCCCCChHHHHHHHHHHhhhccceeccCCCCCceEEecCCccHHHHHHHHHHcCcEEEeecCCeeEEEecCCCCc
Q 001008 501 IMNGQWVNEPHSDVIQKFFRVLAICHTAIPDVNEETGEISYEAESPDEAAFVIAAREVGFQFFGSSQTSISLHELDPVSG 580 (1191)
Q Consensus 501 l~~~~~~~~~~~~~~~~~~~~lalC~~~~~~~~~~~~~~~y~~~sp~e~Alv~~a~~~g~~~~~~~~~~~~i~~~~~~~~ 580 (1191)
-..+++..+..+++-. -+.|....+++.|++.|+.+..+..
T Consensus 326 ------------v~~~~la~aa~lsSl~--------------DeTpEGrSIV~LA~~~~~~~~~~~~------------- 366 (681)
T COG2216 326 ------------VSEEELADAAQLASLA--------------DETPEGRSIVELAKKLGIELREDDL------------- 366 (681)
T ss_pred ------------CCHHHHHHHHHHhhhc--------------cCCCCcccHHHHHHHhccCCCcccc-------------
Confidence 1123444444444222 2478889999999999865432110
Q ss_pred cccceEEEEeEeecccCCCceEEEEEEcCCCcEEEEEeccchHHHHHHhhcChhhHHHHHHHHHHHHhccceEEEEEEEe
Q 001008 581 QKVNRVYELLHVLEFTSSRKRMSVMVRNPENQLLLLCKGADSVMFERLSKHGQQFEAETRRHINRYAEAGLRTLVIAYRE 660 (1191)
Q Consensus 581 ~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~l~~~a~~GlR~L~~A~r~ 660 (1191)
. ..-..+||+.+.|...+-.. ++ .-+-|||.+.|.......+...+++++...++-++.|-..|+++
T Consensus 367 ---~---~~~~fvpFtA~TRmSGvd~~--~~--~~irKGA~dai~~~v~~~~g~~p~~l~~~~~~vs~~GGTPL~V~--- 433 (681)
T COG2216 367 ---Q---SHAEFVPFTAQTRMSGVDLP--GG--REIRKGAVDAIRRYVRERGGHIPEDLDAAVDEVSRLGGTPLVVV--- 433 (681)
T ss_pred ---c---ccceeeecceecccccccCC--CC--ceeecccHHHHHHHHHhcCCCCCHHHHHHHHHHHhcCCCceEEE---
Confidence 0 02345799887765555443 33 55679999999999887766788999999999999999999999
Q ss_pred cCHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHHhhccceEEEeeeecccccCCcHHHHHHHHHcCCeEEEEeCCCHhhH
Q 001008 661 LGEDEYRIWEKEFLKAKTSVTSDREALVASAAEKIERDLILLGATAVEDKLQKGVPECIDKLAQAGIKVWVLTGDKMETA 740 (1191)
Q Consensus 661 l~~~~~~~~~~~~~~a~~~l~~~r~~~~~~~~~~iE~dl~llG~~~ieD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta 740 (1191)
.|-.++|++.++|-+++|.+|-+.+||+.|||.+|+||||+.||
T Consensus 434 ------------------------------------~~~~~~GVI~LkDivK~Gi~ERf~elR~MgIkTvM~TGDN~~TA 477 (681)
T COG2216 434 ------------------------------------ENGRILGVIYLKDIVKPGIKERFAELRKMGIKTVMITGDNPLTA 477 (681)
T ss_pred ------------------------------------ECCEEEEEEEehhhcchhHHHHHHHHHhcCCeEEEEeCCCHHHH
Confidence 57889999999999999999999999999999999999999999
Q ss_pred HHHHHHcCccccCceEEEEecCCchhhhhhhhcchHHHHHHHHHHHHHHHHhhcccccccccccceeEEEEeCchhhHHh
Q 001008 741 INIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQIREGISQVNSAKESKVTFGLVIDGKSLDFAL 820 (1191)
Q Consensus 741 ~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~ 820 (1191)
..||.+.|+..
T Consensus 478 a~IA~EAGVDd--------------------------------------------------------------------- 488 (681)
T COG2216 478 AAIAAEAGVDD--------------------------------------------------------------------- 488 (681)
T ss_pred HHHHHHhCchh---------------------------------------------------------------------
Confidence 99999999821
Q ss_pred HHHHHHHHHHHHhhcCceEEEcCChhhHHHHHHHhhcCCCEEEEEcCCccChHhhhhcceeEEe-ccCccchhhhcccee
Q 001008 821 DKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLVKGTGKTTLAIGDGANDVGMLQEADIGVGI-SGVEGMQAVMSSDYA 899 (1191)
Q Consensus 821 ~~~~~~~~~~l~~~~~~~v~~r~sP~qK~~iV~~l~~~g~~vl~iGDG~ND~~ml~~AdvGI~i-~g~e~~~a~~~aD~v 899 (1191)
..|.++|++|..+++.-|..|+.|+|+|||.||+|+|.+||||++| +|+.. |+++++++
T Consensus 489 ------------------fiAeatPEdK~~~I~~eQ~~grlVAMtGDGTNDAPALAqAdVg~AMNsGTqA--AkEAaNMV 548 (681)
T COG2216 489 ------------------FIAEATPEDKLALIRQEQAEGRLVAMTGDGTNDAPALAQADVGVAMNSGTQA--AKEAANMV 548 (681)
T ss_pred ------------------hhhcCChHHHHHHHHHHHhcCcEEEEcCCCCCcchhhhhcchhhhhccccHH--HHHhhccc
Confidence 4568899999999999999999999999999999999999999999 45544 89999999
Q ss_pred ccchhh--hhHhhhhhchhhhhHhhHhHHHHHHhHHH---HHHHHHHHHhhhccc------cccchhH-HHHHHHHHHhh
Q 001008 900 IAQFRF--LERLLLVHGHWCYRRISMMICYFFYKNLT---FGFTLFWYEAYASFS------GRPAYND-WYMSCYNVFFT 967 (1191)
Q Consensus 900 l~~f~~--l~~lll~~GR~~~~~i~~~i~~~~~~n~~---~~~~~~~~~~~~~~s------~~~~~~~-~~~l~~n~~~~ 967 (1191)
=+|-+. |... +.-|+...-.-..+..|++.--++ .+++.+|+.++.... -.++.+. ..-+.||-+..
T Consensus 549 DLDS~PTKliev-V~IGKqlLiTRGaLTTFSIANDvAKYFaIiPA~F~~~~P~l~~lNiM~L~sP~SAilSAlIfNAlII 627 (681)
T COG2216 549 DLDSNPTKLIEV-VEIGKQLLITRGALTTFSIANDVAKYFAIIPAMFAAAYPQLGALNIMHLHSPQSAILSALIFNALII 627 (681)
T ss_pred ccCCCccceehH-hhhhhhheeecccceeeehhhHHHHHHHHHHHHHHhhcccccceeecccCCcHHHHHHHHHHHHHHH
Confidence 777443 4444 556666554434444444443332 234445554442111 1122222 22355665532
Q ss_pred --hhhHHhhhcccccCChhhhhc
Q 001008 968 --SLPVIALGVFDQDVSARLCLK 988 (1191)
Q Consensus 968 --~~p~~~l~~~~~d~~~~~~~~ 988 (1191)
.+|.-.-|+..++.+...+++
T Consensus 628 v~LIPLAlkGVkyk~~~a~~lL~ 650 (681)
T COG2216 628 VALIPLALKGVKYKPLSASALLR 650 (681)
T ss_pred HHhHHHHhcCcccccCCHHHHHh
Confidence 233333455555555554443
No 34
>PF00122 E1-E2_ATPase: E1-E2 ATPase p-type cation-transporting ATPase superfamily signature H+-transporting ATPase (proton pump) signature sodium/potassium-transporting ATPase signature; InterPro: IPR008250 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane. ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the actuator (A) domain, and some transmembrane helices found in P-type ATPases []. It contains the TGES-loop which is essential for the metal ion binding which results in tight association between the A and P (phosphorylation) domains []. It does not contain the phosphorylation site. It is thought that the large movement of the actuator domain, which is transmitted to the transmembrane helices, is essential to the long distance coupling between formation/decomposition of the acyl phosphate in the cytoplasmic P-domain and the changes in the ion-binding sites buried deep in the membranous region []. This domain has a modulatory effect on the phosphoenzyme processing steps through its nucleotide binding [],[]. P-type (or E1-E2-type) ATPases that form an aspartyl phosphate intermediate in the course of ATP hydrolysis, can be divided into 4 major groups []: (1) Ca2+-transporting ATPases; (2) Na+/K+- and gastric H+/K+-transporting ATPases; (3) plasma membrane H+-transporting ATPases (proton pumps) of plants, fungi and lower eukaryotes; and (4) all bacterial P-type ATPases, except the g2+-ATPase of Salmonella typhimurium, which is more similar to the eukaryotic sequences. However, great variety of sequence analysis methods results in diversity of classification. More information about this protein can be found at Protein of the Month: ATP Synthases [].; GO: 0000166 nucleotide binding, 0046872 metal ion binding; PDB: 2XZB_A 1MHS_B 3TLM_A 3A3Y_A 2ZXE_A 3NAL_A 3NAM_A 3NAN_A 2YJ6_B 2IYE_A ....
Probab=99.97 E-value=3.2e-29 Score=273.56 Aligned_cols=222 Identities=27% Similarity=0.378 Sum_probs=184.2
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhHHHHh---cce-EEEEecCCeEEEEeccccccccEEEEeCCCcccceEEEEeeeCCCc
Q 001008 110 LIVVIGATMAKEGVEDWRRRKQDIEAN---NRK-VKVYGQDHTFVETKWKNLRVGDLVKVHKDEYFPADLLLLSSIYEDG 185 (1191)
Q Consensus 110 l~~vl~~~~i~~~~~d~~r~k~~~~~n---~~~-~~V~r~~g~~~~i~~~~L~vGDIV~l~~ge~iPaD~~lL~ss~~~g 185 (1191)
++++++++.+.+.++++++++.+++++ +.+ ++|+| ||++++++|++|+|||||.|++||.+||||++|+ +|
T Consensus 2 i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~r-~~~~~~i~~~~L~~GDiI~l~~g~~vPaD~~ll~----~g 76 (230)
T PF00122_consen 2 ILFLILLSNIIEIWQEYRSKKQLKKLNNLNPQKKVTVIR-DGRWQKIPSSELVPGDIIILKAGDIVPADGILLE----SG 76 (230)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHCTTSSSEEEEEEE-TTEEEEEEGGGT-TTSEEEEETTEBESSEEEEEE----SS
T ss_pred EEEEhHHHHHHHHHHHHHHHHHHHHHhccCCCccEEEEe-ccccccchHhhccceeeeecccccccccCcccee----cc
Confidence 567788888899999999999988875 344 89999 9999999999999999999999999999999998 26
Q ss_pred eEEEEeccCCcccccEeecchhhhcccCChhhhcccceEEEeecCCCCceeeEEEEEEcCeeeccCCCceeecCcEeecC
Q 001008 186 ICYVETMNLDGETNLKLKRSLEATNHLRDEESFQKFTAVIKCEDPNERLYSFVGTLQYEGKQYPLSPQQILLRDSKLKNT 265 (1191)
Q Consensus 186 ~~~Vd~s~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~~~i~~e~pn~~~~~f~Gt~~~~g~~~~l~~~n~l~rgs~l~nt 265 (1191)
.++||||.||||+.|+.|.+. +++.+|++++||.+. +
T Consensus 77 ~~~vd~s~ltGes~pv~k~~~------------------------------------------~~~~~~~i~~Gs~v~-~ 113 (230)
T PF00122_consen 77 SAYVDESALTGESEPVKKTPL------------------------------------------PLNPGNIIFAGSIVV-S 113 (230)
T ss_dssp EEEEECHHHHSBSSEEEESSS------------------------------------------CCCTTTEE-TTEEEE-E
T ss_pred ccccccccccccccccccccc------------------------------------------cccccchhhcccccc-c
Confidence 699999999999999999863 556778999999999 7
Q ss_pred CeEEEEEEEecchhhHh---hccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcccccCCCccccccccCC
Q 001008 266 DYVYGVVVFTGHDTKVM---QNATDPPSKRSKIERKMDKIVYLLFSTLILISSTGSVFFGIETKRDIDGGKIRRWYLQPD 342 (1191)
Q Consensus 266 ~~~~gvVv~tG~~Tki~---~~~~~~~~k~s~l~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~ 342 (1191)
||++|+|++||.+|++. +....++.+++++++.++++..+++++.+++++++++++.++... ..|
T Consensus 114 g~~~~~Vi~tG~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~----- 181 (230)
T PF00122_consen 114 GWGIGVVIATGSDTKLGRILQLVSKSESKKSPLERKLNKIAKILIIIILAIAILVFIIWFFNDSG-------ISF----- 181 (230)
T ss_dssp EEEEEEEEE-GGGSHHHHHHHHHHTSCSS-THHHHHHHHHHHHHHHHHHHHHHHHHHHCHTGSTT-------CHC-----
T ss_pred cccccccceeeecccccccccccccccccchhhhhhhHHHHHHHHhcccccchhhhccceecccc-------ccc-----
Confidence 89999999999999664 334456667899999999999999988888888776555442100 022
Q ss_pred CCCcccCCCCchhHHHHHHHHHHHHhhccccchhhhHHHHHHHHHHHHHhhcccccccCCCCCccccCcccccc
Q 001008 343 DATVFYDPRRAPLAAFLHFLTGLMLYGYLIPISLYISIEIVKVLQSVFINHDRDMYYEDTDKPARARTSNLNEE 416 (1191)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~~~~i~ll~~~iP~sL~v~~~~~~~~~~~~i~~d~~m~~~~~~~~~~v~~~~~~e~ 416 (1191)
...+..++.+++.++|++|+++++++...++.++ .++++++|+++++|+
T Consensus 182 ---------------~~~~~~~i~~l~~~~P~~l~~~~~~~~~~~~~~~----------~~~~i~v~~~~a~E~ 230 (230)
T PF00122_consen 182 ---------------FKSFLFAISLLIVLIPCALPLALPLSLAIAARRL----------AKNGIIVKNLSALEA 230 (230)
T ss_dssp ---------------CHHHHHHHHHHHHHS-TTHHHHHHHHHHHHHHHH----------HHTTEEESSTTHHHH
T ss_pred ---------------ccccccccceeeeecccceeehHHHHHHHHHHHH----------HHCCEEEeCcccccC
Confidence 2378888999999999999999999999999988 788999999999884
No 35
>PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase). This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J ....
Probab=99.84 E-value=1.2e-20 Score=203.98 Aligned_cols=97 Identities=33% Similarity=0.514 Sum_probs=90.5
Q ss_pred cceEEEeeeecccccCCcHHHHHHHHHcCCeEEEEeCCCHhhHHHHHHHcCccccCceEEEEecCCchhhhhhhhcchHH
Q 001008 698 DLILLGATAVEDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKEN 777 (1191)
Q Consensus 698 dl~llG~~~ieD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 777 (1191)
++.++|.+.+.|+++++++++|+.|+++|++++|+|||+..+|..+|+++||..
T Consensus 115 ~~~~~~~~~~~d~~~~~~~~~l~~L~~~Gi~~~i~TGD~~~~a~~~~~~lgi~~-------------------------- 168 (215)
T PF00702_consen 115 NLIFLGLFGLRDPLRPGAKEALQELKEAGIKVAILTGDNESTASAIAKQLGIFD-------------------------- 168 (215)
T ss_dssp SHEEEEEEEEEEEBHTTHHHHHHHHHHTTEEEEEEESSEHHHHHHHHHHTTSCS--------------------------
T ss_pred cCeEEEEEeecCcchhhhhhhhhhhhccCcceeeeecccccccccccccccccc--------------------------
Confidence 789999999999999999999999999999999999999999999999999921
Q ss_pred HHHHHHHHHHHHHHhhcccccccccccceeEEEEeCchhhHHhHHHHHHHHHHHHhhcCceEEEcC--ChhhH--HHHHH
Q 001008 778 ITKVSLESVTKQIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRS--SPKQK--ALVTR 853 (1191)
Q Consensus 778 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~l~~~~~~~v~~r~--sP~qK--~~iV~ 853 (1191)
..+++++ +|++| .++++
T Consensus 169 -----------------------------------------------------------~~v~a~~~~kP~~k~~~~~i~ 189 (215)
T PF00702_consen 169 -----------------------------------------------------------SIVFARVIGKPEPKIFLRIIK 189 (215)
T ss_dssp -----------------------------------------------------------EEEEESHETTTHHHHHHHHHH
T ss_pred -----------------------------------------------------------ccccccccccccchhHHHHHH
Confidence 2489999 99999 99999
Q ss_pred HhhcCCCEEEEEcCCccChHhhhhcc
Q 001008 854 LVKGTGKTTLAIGDGANDVGMLQEAD 879 (1191)
Q Consensus 854 ~l~~~g~~vl~iGDG~ND~~ml~~Ad 879 (1191)
.++..++.|+|+|||.||++|+++||
T Consensus 190 ~l~~~~~~v~~vGDg~nD~~al~~Ag 215 (215)
T PF00702_consen 190 ELQVKPGEVAMVGDGVNDAPALKAAG 215 (215)
T ss_dssp HHTCTGGGEEEEESSGGHHHHHHHSS
T ss_pred HHhcCCCEEEEEccCHHHHHHHHhCc
Confidence 99756669999999999999999997
No 36
>PF13246 Hydrolase_like2: Putative hydrolase of sodium-potassium ATPase alpha subunit
Probab=99.51 E-value=1.8e-14 Score=130.84 Aligned_cols=90 Identities=29% Similarity=0.498 Sum_probs=71.1
Q ss_pred hhhccceeccCCCCCceEEecCCccHHHHHHHHHHcCcEEEeecCCeeEEEecCCCCccccceEEEEeEeecccCCCceE
Q 001008 523 AICHTAIPDVNEETGEISYEAESPDEAAFVIAAREVGFQFFGSSQTSISLHELDPVSGQKVNRVYELLHVLEFTSSRKRM 602 (1191)
Q Consensus 523 alC~~~~~~~~~~~~~~~y~~~sp~e~Alv~~a~~~g~~~~~~~~~~~~i~~~~~~~~~~~~~~~~il~~~~F~s~rkrm 602 (1191)
+|||++....+++....+ ..|+|+|.||+.++...|..+.. ......+++++++||||+||||
T Consensus 1 ~LCn~a~~~~~~~~~~~~-~~G~ptE~ALl~~~~~~g~~~~~----------------~~~~~~~~~~~~~pF~S~rK~m 63 (91)
T PF13246_consen 1 ALCNDAEIEYDDESKTEE-IIGDPTEKALLRFAKKLGVGIDI----------------KEIRSKYKIVAEIPFDSERKRM 63 (91)
T ss_pred CCccccEeecCCCCcccc-ccCCcCHHHHHHHHHHcCCCCcH----------------HHHHhhcceeEEEccCccccee
Confidence 589999886554333322 46899999999999999754321 1126789999999999999999
Q ss_pred EEEEEcCCCcEEEEEeccchHHHHHHhh
Q 001008 603 SVMVRNPENQLLLLCKGADSVMFERLSK 630 (1191)
Q Consensus 603 sviv~~~~~~~~l~~KGa~~~i~~~~~~ 630 (1191)
+||++ .++.+++|+|||||.|+++|+.
T Consensus 64 svv~~-~~~~~~~~~KGA~e~il~~Ct~ 90 (91)
T PF13246_consen 64 SVVVR-NDGKYILYVKGAPEVILDRCTH 90 (91)
T ss_pred EEEEe-CCCEEEEEcCCChHHHHHhcCC
Confidence 99999 3446888999999999999974
No 37
>COG4087 Soluble P-type ATPase [General function prediction only]
Probab=99.46 E-value=3.8e-13 Score=122.96 Aligned_cols=126 Identities=24% Similarity=0.387 Sum_probs=109.0
Q ss_pred ceEEEeeeecccccCCcHHHHHHHHHcCCeEEEEeCCCHhhHHHHHHHcCccccCceEEEEecCCchhhhhhhhcchHHH
Q 001008 699 LILLGATAVEDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENI 778 (1191)
Q Consensus 699 l~llG~~~ieD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 778 (1191)
....+.++---+|=++|+++|++|++. ++|+++|||..-+....|.-.|+-..
T Consensus 19 ~~v~~tiatgGklf~ev~e~iqeL~d~-V~i~IASgDr~gsl~~lae~~gi~~~-------------------------- 71 (152)
T COG4087 19 GKVLYTIATGGKLFSEVSETIQELHDM-VDIYIASGDRKGSLVQLAEFVGIPVE-------------------------- 71 (152)
T ss_pred ceEEEEEccCcEEcHhhHHHHHHHHHh-heEEEecCCcchHHHHHHHHcCCcee--------------------------
Confidence 567788888889999999999999999 99999999999999999998886211
Q ss_pred HHHHHHHHHHHHHhhcccccccccccceeEEEEeCchhhHHhHHHHHHHHHHHHhhcCceEEEcCChhhHHHHHHHhhcC
Q 001008 779 TKVSLESVTKQIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLVKGT 858 (1191)
Q Consensus 779 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~l~~~~~~~v~~r~sP~qK~~iV~~l~~~ 858 (1191)
.+++-..|+.|+.+++-|++.
T Consensus 72 -----------------------------------------------------------rv~a~a~~e~K~~ii~eLkk~ 92 (152)
T COG4087 72 -----------------------------------------------------------RVFAGADPEMKAKIIRELKKR 92 (152)
T ss_pred -----------------------------------------------------------eeecccCHHHHHHHHHHhcCC
Confidence 288899999999999999889
Q ss_pred CCEEEEEcCCccChHhhhhcceeEEeccCccc--hhhhccceeccchhhhhHhh
Q 001008 859 GKTTLAIGDGANDVGMLQEADIGVGISGVEGM--QAVMSSDYAIAQFRFLERLL 910 (1191)
Q Consensus 859 g~~vl~iGDG~ND~~ml~~AdvGI~i~g~e~~--~a~~~aD~vl~~f~~l~~ll 910 (1191)
++.|.|+|||+||.+||+.||+||..-+.++. .+..+||+++.+...+..++
T Consensus 93 ~~k~vmVGnGaND~laLr~ADlGI~tiq~e~v~~r~l~~ADvvik~i~e~ldl~ 146 (152)
T COG4087 93 YEKVVMVGNGANDILALREADLGICTIQQEGVPERLLLTADVVLKEIAEILDLL 146 (152)
T ss_pred CcEEEEecCCcchHHHhhhcccceEEeccCCcchHHHhhchhhhhhHHHHHHHh
Confidence 99999999999999999999999976555553 24589999999877766664
No 38
>KOG4383 consensus Uncharacterized conserved protein [Function unknown]
Probab=99.30 E-value=1.7e-08 Score=115.29 Aligned_cols=285 Identities=13% Similarity=0.186 Sum_probs=170.9
Q ss_pred HhhccceEEEeeeecccccCCcHHHHHHHHHcCCeEEEEeCCCHhhHHHHHHHcCccccCceEEEEecCCc---------
Q 001008 694 KIERDLILLGATAVEDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSP--------- 764 (1191)
Q Consensus 694 ~iE~dl~llG~~~ieD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~--------- 764 (1191)
+.-.+-.|.|++...-+.+.+....|+.|-++.|+.+..+-.+.....-.|.++||-..+...+.+..+..
T Consensus 810 Qa~sGQIf~GlVs~~Yea~ldiVriIdgL~naCiRfVYFS~EdELkSkVFAEKlGiEaGWNCHISLa~~~d~Pg~e~~pa 889 (1354)
T KOG4383|consen 810 QAFSGQIFCGLVSLHYEAILDIVRIIDGLDNACIRFVYFSKEDELKSKVFAEKLGIEAGWNCHISLAEEEDAPGREAGPA 889 (1354)
T ss_pred HHhccchhhhhhhhhccchhhHHHHHHHhhhhheeeeeecchHHHHHHHHHHHhccccccceeEEeccCCCCCcccCCCC
Confidence 33467789999999999999999999999999999999999999999999999999887766666543320
Q ss_pred -hhhhhhhhcchHHHHHHH---HHHHHHHHHhhccccccccc---------ccceeEEEEeCchhhHHhHHHHHHHHHHH
Q 001008 765 -DMEALEKQGDKENITKVS---LESVTKQIREGISQVNSAKE---------SKVTFGLVIDGKSLDFALDKKLEKMFLDL 831 (1191)
Q Consensus 765 -~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~---------~~~~~~lvi~G~~l~~~~~~~~~~~~~~l 831 (1191)
+...-.+.+-.+.++... .+...-.++++...+..-+. ...+.+-.-.|- ...+.|+.++
T Consensus 890 ~~q~a~qkpSlhddlnqia~ddaeg~lL~~Eeg~~dliSfq~~dsdi~kf~ed~N~AkLPrGi-------hnVRPHL~~i 962 (1354)
T KOG4383|consen 890 HEQFAAQKPSLHDDLNQIALDDAEGELLDCEEGARDLISFQKMDSDIAKFAEDPNIAKLPRGI-------HNVRPHLDEI 962 (1354)
T ss_pred ChhhhccCcchhHHHHHhhhcccccceeehhhcccCCccccccccchhhhcCCCchhhcCcch-------hhcCcccccc
Confidence 000000000000110000 00000001111000000000 000000000000 0111111111
Q ss_pred Hhhc-CceEEEcCChhhHHHHHHHhhcCCCEEEEEcCCccC--hHhhhhcceeEEeccCccch-------------hhhc
Q 001008 832 AIDC-ASVICCRSSPKQKALVTRLVKGTGKTTLAIGDGAND--VGMLQEADIGVGISGVEGMQ-------------AVMS 895 (1191)
Q Consensus 832 ~~~~-~~~v~~r~sP~qK~~iV~~l~~~g~~vl~iGDG~ND--~~ml~~AdvGI~i~g~e~~~-------------a~~~ 895 (1191)
-..- -+-.|.+++|+.--++++.+|..|++|+++|..+|- ...+-+|||+|++..-+... -.++
T Consensus 963 DNVPLLV~LFTDcnpeamcEMIeIMQE~GEVtcclGS~aN~rNSciflkadISialD~l~~~~C~~e~fg~assismaqa 1042 (1354)
T KOG4383|consen 963 DNVPLLVGLFTDCNPEAMCEMIEIMQENGEVTCCLGSCANARNSCIFLKADISIALDDLEEPACRLEDFGVASSISMAQA 1042 (1354)
T ss_pred cCcceeeeeccCCCHHHHHHHHHHHHHcCcEEEEeccccccccceEEEccceeEEeccCCCccceecccccchhhhhhhh
Confidence 0000 023688999999999999999999999999999984 45668999999885422210 0122
Q ss_pred cc----eecc--------chhh-------hhHhhhhhchhhhhHhhHhHHHHHHhHHHHHHHHHHHHhhhccccccchhH
Q 001008 896 SD----YAIA--------QFRF-------LERLLLVHGHWCYRRISMMICYFFYKNLTFGFTLFWYEAYASFSGRPAYND 956 (1191)
Q Consensus 896 aD----~vl~--------~f~~-------l~~lll~~GR~~~~~i~~~i~~~~~~n~~~~~~~~~~~~~~~~s~~~~~~~ 956 (1191)
+| ..+. +|++ +.+| ++-+|....-+++.++|.++..+.++.++|+..++. -.++|+-
T Consensus 1043 ndglsplQiSgqLnaL~c~~~f~~ee~ikiirL-Ie~ARHa~~g~R~cfLFiLq~qL~l~Vi~flSc~~~---LP~i~s~ 1118 (1354)
T KOG4383|consen 1043 NDGLSPLQISGQLNALACDFRFDHEELIKIIRL-IECARHAMSGFRHCFLFILQAQLLLSVIIFLSCFFF---LPIIFSH 1118 (1354)
T ss_pred cCCCCceeecccccccccccchhHHHHHHHHHH-HHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHh---ccchhcc
Confidence 22 1111 2322 5555 788999999999999999999999999888877664 3455777
Q ss_pred HHHHHHHHHhhhhhHHhhh-cccccCChhh-hhcCcc
Q 001008 957 WYMSCYNVFFTSLPVIALG-VFDQDVSARL-CLKYPL 991 (1191)
Q Consensus 957 ~~~l~~n~~~~~~p~~~l~-~~~~d~~~~~-~~~~P~ 991 (1191)
.+++|...+- +|.++++ ++.+..+... +|..|+
T Consensus 1119 sdii~lScfc--~PlL~i~tL~gk~~hkSii~maagK 1153 (1354)
T KOG4383|consen 1119 SDIILLSCFC--IPLLFIGTLFGKFEHKSIIIMAAGK 1153 (1354)
T ss_pred chHHHHHHHH--HHHHHHHHHhcCCCccceEEeeccC
Confidence 7888887664 6888887 4544444333 334443
No 39
>PF00689 Cation_ATPase_C: Cation transporting ATPase, C-terminus; InterPro: IPR006068 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane. ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the conserved C-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+ (3.6.3.6 from EC), Na+ (3.6.3.7 from EC), Ca2+ (3.6.3.8 from EC), Na+/K+ (3.6.3.9 from EC), and H+/K+ (3.6.3.10 from EC). In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. More information about this protein can be found at Protein of the Month: ATP Synthases [].; PDB: 3A3Y_A 2ZXE_A 2XZB_A 3B9B_A 3N5K_A 3FPS_A 3B9R_A 1WPG_C 2AGV_A 2O9J_A ....
Probab=99.24 E-value=5.3e-11 Score=124.82 Aligned_cols=173 Identities=10% Similarity=0.129 Sum_probs=125.6
Q ss_pred cchhHHHHHHHHHHhhhhhHHhhhcccccCChhhhhcCccchhccccCCccchhhHHHhhHhHHHHHHHHHHHHHhhhcc
Q 001008 952 PAYNDWYMSCYNVFFTSLPVIALGVFDQDVSARLCLKYPLLYQEGVQNILFSWPRILGWMSNGVLSAIIIFFFTTNSIFN 1031 (1191)
Q Consensus 952 ~~~~~~~~l~~n~~~~~~p~~~l~~~~~d~~~~~~~~~P~ly~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 1031 (1191)
.++++.|++|+|++.|.+|+++++.++ ++++.+.+.|+ ++++++++++.+...+..|+++++++++.++.....
T Consensus 2 ~Pl~~~qiL~inli~d~~~a~al~~e~--~~~~im~r~Pr----~~~~~l~~~~~~~~i~~~g~~~~~~~~~~f~~~~~~ 75 (182)
T PF00689_consen 2 LPLTPIQILWINLITDLLPALALGFEP--PDPDIMKRPPR----DPNEPLINKRLLRRILIQGLIMAAACFFAFFLGLYI 75 (182)
T ss_dssp -SS-HHHHHHHHHTTTHHHHHHGGGSS---STTGGGS-------TTTS-SSSHHHHHHHCCHHHHHHHHHHHHHHHHHHS
T ss_pred CCCcHHHHHHHHHHHHHHHHHHHhcCc--chhhhhhcccc----ccchhhccHHhHhHHHHHHHHHHHHHHHHHHHHhhc
Confidence 468999999999999999999999865 44455555555 788999999999999999999999998887765542
Q ss_pred ccccCCCcceehhhhhhHHhhHHHHHHHHHHHhhhcc--------chhhHHHHHHHHHHHHHHHHHHHhcCCCCCcchhH
Q 001008 1032 QAFRKDGHAVDYEVLGVAMYSSVVWAVNCQMALSINY--------FTWIQHFFIWGSIALWYIFLVVYGSLPPTFSTTAY 1103 (1191)
Q Consensus 1032 ~~~~~~g~~~~~~~~~~~~f~~~v~~~~~~~~l~~~~--------~~~~~~~~i~~si~~~~i~~~i~~~~~~~~~~~~~ 1103 (1191)
......+...+.....|+.|+++++.+.+.... .|+ .....|..+++++++.++++++..++|. ++.
T Consensus 76 ~~~~~~~~~~~~~~a~T~~F~~lv~~q~~~~~~-~r~~~~~~~~~~~~~~N~~l~~~~~~~~~l~~~i~~~P~-~~~--- 150 (182)
T PF00689_consen 76 FGWDEETNNDNLAQAQTMAFTALVLSQLFNAFN-CRSRRRSVFRFRGIFSNKWLLIAILISIALQILIVYVPG-LNR--- 150 (182)
T ss_dssp TCSSSHHHTTCHHHHHHHHHHHHHHHHHHHHHH-TSSSSSTCTT-STGGGSHHHHHHHHHHHHHHHHHHHSTT-HHH---
T ss_pred cccccccchhHHHHHHHHHHHHHHHHHHhhhcc-cccccccceecccccccchHHHHHHHHHHHHHHHhcchh-hHh---
Confidence 111111111124568899999999888777543 333 2345688899999999999999999984 233
Q ss_pred HHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHHH
Q 001008 1104 KVLVEACAPSILYWLTTLLVVVSTLLPYFLYRAF 1137 (1191)
Q Consensus 1104 ~~~~~~~~~s~~~wl~~l~~~~~~ll~~~i~k~~ 1137 (1191)
+|+..+.++..|+.++..+++.++.+++.|++
T Consensus 151 --~f~~~~l~~~~w~~~l~~~~~~~~~~ei~K~i 182 (182)
T PF00689_consen 151 --IFGTAPLPLWQWLICLALALLPFIVDEIRKLI 182 (182)
T ss_dssp --HST----THHHHHCHHHHHCHHHHHHHHHHHH
T ss_pred --hhcccCCCHHHHHHHHHHHHHHHHHHHHHHHC
Confidence 56677889999999999999999999999875
No 40
>COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=98.70 E-value=2.3e-07 Score=98.64 Aligned_cols=120 Identities=24% Similarity=0.252 Sum_probs=88.5
Q ss_pred ccccCCcHHHHHHHHHcCCeEEEEeCCCHhhHHHHHHHcCccccCceEEEEecCCchhhhhhhhcchHHHHHHHHHHHHH
Q 001008 709 DKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTK 788 (1191)
Q Consensus 709 D~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 788 (1191)
.++.|++.+.++.++++|.+||++||-...-+..+|+.+|+...-...+.....
T Consensus 76 ~~l~~ga~elv~~lk~~G~~v~iiSgg~~~lv~~ia~~lg~d~~~an~l~~~dG-------------------------- 129 (212)
T COG0560 76 LRLTPGAEELVAALKAAGAKVVIISGGFTFLVEPIAERLGIDYVVANELEIDDG-------------------------- 129 (212)
T ss_pred CcCCccHHHHHHHHHHCCCEEEEEcCChHHHHHHHHHHhCCchheeeEEEEeCC--------------------------
Confidence 789999999999999999999999999999999999999995433222222110
Q ss_pred HHHhhcccccccccccceeEEEEeCchhhHHhHHHHHHHHHHHHhhcCceEEEcCChhhHHHHHHHh-hcCCC---EEEE
Q 001008 789 QIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLV-KGTGK---TTLA 864 (1191)
Q Consensus 789 ~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~l~~~~~~~v~~r~sP~qK~~iV~~l-~~~g~---~vl~ 864 (1191)
+++|. ++.-.+..+.|...++.+ ...|. .+.+
T Consensus 130 ---------------------~ltG~-----------------------v~g~~~~~~~K~~~l~~~~~~~g~~~~~~~a 165 (212)
T COG0560 130 ---------------------KLTGR-----------------------VVGPICDGEGKAKALRELAAELGIPLEETVA 165 (212)
T ss_pred ---------------------EEece-----------------------eeeeecCcchHHHHHHHHHHHcCCCHHHeEE
Confidence 22222 222234457888888766 55553 5999
Q ss_pred EcCCccChHhhhhcceeEEeccCccchhhhccceec
Q 001008 865 IGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAI 900 (1191)
Q Consensus 865 iGDG~ND~~ml~~AdvGI~i~g~e~~~a~~~aD~vl 900 (1191)
+|||.||.|||+.|+.+|++..... ....|+..+
T Consensus 166 ~gDs~nDlpml~~ag~~ia~n~~~~--l~~~a~~~~ 199 (212)
T COG0560 166 YGDSANDLPMLEAAGLPIAVNPKPK--LRALADVRI 199 (212)
T ss_pred EcCchhhHHHHHhCCCCeEeCcCHH--HHHHHHHhc
Confidence 9999999999999999999976654 334444433
No 41
>PRK10513 sugar phosphate phosphatase; Provisional
Probab=98.69 E-value=4.9e-08 Score=109.43 Aligned_cols=60 Identities=22% Similarity=0.343 Sum_probs=48.9
Q ss_pred cCChh--hHHHHHHHh-hcCC---CEEEEEcCCccChHhhhhcceeEEeccCccchhhhccceeccc
Q 001008 842 RSSPK--QKALVTRLV-KGTG---KTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAIAQ 902 (1191)
Q Consensus 842 r~sP~--qK~~iV~~l-~~~g---~~vl~iGDG~ND~~ml~~AdvGI~i~g~e~~~a~~~aD~vl~~ 902 (1191)
.++|. .|+.-++.+ +..| ..|+++|||.||.+||+.|++||+|.+.. ..++..||++..+
T Consensus 189 eI~~~gvsKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm~NA~-~~vK~~A~~vt~~ 254 (270)
T PRK10513 189 EILDKRVNKGTGVKSLAEHLGIKPEEVMAIGDQENDIAMIEYAGVGVAMGNAI-PSVKEVAQFVTKS 254 (270)
T ss_pred EEeCCCCChHHHHHHHHHHhCCCHHHEEEECCchhhHHHHHhCCceEEecCcc-HHHHHhcCeeccC
Confidence 44443 799999988 6655 56999999999999999999999995543 4489999999865
No 42
>COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only]
Probab=98.62 E-value=2.2e-07 Score=103.66 Aligned_cols=55 Identities=27% Similarity=0.419 Sum_probs=46.3
Q ss_pred hHHHHHHHh-hcCCC---EEEEEcCCccChHhhhhcceeEEeccCccchhhhccceeccc
Q 001008 847 QKALVTRLV-KGTGK---TTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAIAQ 902 (1191)
Q Consensus 847 qK~~iV~~l-~~~g~---~vl~iGDG~ND~~ml~~AdvGI~i~g~e~~~a~~~aD~vl~~ 902 (1191)
+|+..++.+ +..|- .|+++|||.||.+||+.|+.||+|.+. ...++..||++...
T Consensus 189 ~K~~al~~l~~~lgi~~~~v~afGD~~ND~~Ml~~ag~gvam~Na-~~~~k~~A~~vt~~ 247 (264)
T COG0561 189 SKGYALQRLAKLLGIKLEEVIAFGDSTNDIEMLEVAGLGVAMGNA-DEELKELADYVTTS 247 (264)
T ss_pred chHHHHHHHHHHhCCCHHHeEEeCCccccHHHHHhcCeeeeccCC-CHHHHhhCCcccCC
Confidence 799999999 76664 499999999999999999999999665 44489999976544
No 43
>TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein. This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338).
Probab=98.57 E-value=2.6e-07 Score=97.84 Aligned_cols=126 Identities=20% Similarity=0.153 Sum_probs=89.3
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEeCCCHhhHHHHHHHcCccccCceEEEEecCCchhhhhhhhcchHHHHHHHHHHHHHH
Q 001008 710 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQ 789 (1191)
Q Consensus 710 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 (1191)
++.|++.+.|+.+++.| ++.++||-....+..+++.+|+..--.....++...
T Consensus 68 ~l~pga~ell~~lk~~~-~~~IVS~~~~~~~~~il~~lgi~~~~an~l~~~~~g-------------------------- 120 (203)
T TIGR02137 68 KPLEGAVEFVDWLRERF-QVVILSDTFYEFSQPLMRQLGFPTLLCHKLEIDDSD-------------------------- 120 (203)
T ss_pred CCCccHHHHHHHHHhCC-eEEEEeCChHHHHHHHHHHcCCchhhceeeEEecCC--------------------------
Confidence 57999999999999975 999999999999999999999842111000010000
Q ss_pred HHhhcccccccccccceeEEEEeCchhhHHhHHHHHHHHHHHHhhcCceEEEcCChhhHHHHHHHhhcCCCEEEEEcCCc
Q 001008 790 IREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLVKGTGKTTLAIGDGA 869 (1191)
Q Consensus 790 ~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~l~~~~~~~v~~r~sP~qK~~iV~~l~~~g~~vl~iGDG~ 869 (1191)
.++|. .. ..+..|..+++.++..|..+.++|||.
T Consensus 121 --------------------~~tG~------------------------~~--~~~~~K~~~l~~l~~~~~~~v~vGDs~ 154 (203)
T TIGR02137 121 --------------------RVVGY------------------------QL--RQKDPKRQSVIAFKSLYYRVIAAGDSY 154 (203)
T ss_pred --------------------eeECe------------------------ee--cCcchHHHHHHHHHhhCCCEEEEeCCH
Confidence 11111 11 246789999999976777899999999
Q ss_pred cChHhhhhcceeEEeccCccchhhhccceecc-chhhhhHh
Q 001008 870 NDVGMLQEADIGVGISGVEGMQAVMSSDYAIA-QFRFLERL 909 (1191)
Q Consensus 870 ND~~ml~~AdvGI~i~g~e~~~a~~~aD~vl~-~f~~l~~l 909 (1191)
||.+|++.|++||++.+++.. ...+-|+... +...+...
T Consensus 155 nDl~ml~~Ag~~ia~~ak~~~-~~~~~~~~~~~~~~~~~~~ 194 (203)
T TIGR02137 155 NDTTMLSEAHAGILFHAPENV-IREFPQFPAVHTYEDLKRE 194 (203)
T ss_pred HHHHHHHhCCCCEEecCCHHH-HHhCCCCCcccCHHHHHHH
Confidence 999999999999999888763 3344455443 34445554
No 44
>PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional
Probab=98.53 E-value=1e-07 Score=106.84 Aligned_cols=57 Identities=21% Similarity=0.196 Sum_probs=46.5
Q ss_pred EcCChh--hHHHHHHHh-hcCC---CEEEEEcCCccChHhhhhcceeEEeccCccchhhhccce
Q 001008 841 CRSSPK--QKALVTRLV-KGTG---KTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDY 898 (1191)
Q Consensus 841 ~r~sP~--qK~~iV~~l-~~~g---~~vl~iGDG~ND~~ml~~AdvGI~i~g~e~~~a~~~aD~ 898 (1191)
..++|. .|+.-++.+ +..| ..|+++|||.||++||+.|+.||+|.+. ..+++..||+
T Consensus 180 ~eI~~~g~sKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm~Na-~~~vK~~A~~ 242 (272)
T PRK15126 180 LEVLPVGCNKGAALAVLSQHLGLSLADCMAFGDAMNDREMLGSVGRGFIMGNA-MPQLRAELPH 242 (272)
T ss_pred EEeecCCCChHHHHHHHHHHhCCCHHHeEEecCCHHHHHHHHHcCCceeccCC-hHHHHHhCCC
Confidence 345555 699999999 6666 5699999999999999999999999554 3448888986
No 45
>PRK11133 serB phosphoserine phosphatase; Provisional
Probab=98.53 E-value=2.6e-07 Score=104.48 Aligned_cols=127 Identities=24% Similarity=0.215 Sum_probs=88.9
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEeCCCHhhHHHHHHHcCccccCceEEEEecCCchhhhhhhhcchHHHHHHHHHHHHHH
Q 001008 710 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQ 789 (1191)
Q Consensus 710 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 (1191)
++.||+.+.|+.|++.|+++.++||.....+..+..++|+..--...+.+...
T Consensus 181 ~l~pGa~elL~~Lk~~G~~~aIvSgg~~~~~~~l~~~Lgld~~~an~lei~dg--------------------------- 233 (322)
T PRK11133 181 PLMPGLTELVLKLQALGWKVAIASGGFTYFADYLRDKLRLDAAVANELEIMDG--------------------------- 233 (322)
T ss_pred CCChhHHHHHHHHHHcCCEEEEEECCcchhHHHHHHHcCCCeEEEeEEEEECC---------------------------
Confidence 57899999999999999999999999988888888888883211111100000
Q ss_pred HHhhcccccccccccceeEEEEeCchhhHHhHHHHHHHHHHHHhhcCceEEEcCChhhHHHHHHHh-hcCC---CEEEEE
Q 001008 790 IREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLV-KGTG---KTTLAI 865 (1191)
Q Consensus 790 ~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~l~~~~~~~v~~r~sP~qK~~iV~~l-~~~g---~~vl~i 865 (1191)
.++|.... .-+..+.|...++.+ +..| ..|+++
T Consensus 234 --------------------~ltg~v~g-----------------------~iv~~k~K~~~L~~la~~lgi~~~qtIaV 270 (322)
T PRK11133 234 --------------------KLTGNVLG-----------------------DIVDAQYKADTLTRLAQEYEIPLAQTVAI 270 (322)
T ss_pred --------------------EEEeEecC-----------------------ccCCcccHHHHHHHHHHHcCCChhhEEEE
Confidence 11111000 012235788888888 5555 579999
Q ss_pred cCCccChHhhhhcceeEEeccCccchhhhccceeccchhhhhHh
Q 001008 866 GDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAIAQFRFLERL 909 (1191)
Q Consensus 866 GDG~ND~~ml~~AdvGI~i~g~e~~~a~~~aD~vl~~f~~l~~l 909 (1191)
|||.||.+|++.|++||++...+. .+..||.++. ...+..+
T Consensus 271 GDg~NDl~m~~~AGlgiA~nAkp~--Vk~~Ad~~i~-~~~l~~~ 311 (322)
T PRK11133 271 GDGANDLPMIKAAGLGIAYHAKPK--VNEQAQVTIR-HADLMGV 311 (322)
T ss_pred ECCHHHHHHHHHCCCeEEeCCCHH--HHhhCCEEec-CcCHHHH
Confidence 999999999999999999955544 6789999996 3334443
No 46
>TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily. catalyze the same reaction as SPP.
Probab=98.44 E-value=6.2e-07 Score=97.58 Aligned_cols=181 Identities=15% Similarity=0.162 Sum_probs=94.5
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEeCCCHhhHHHHHHHcCccccCceEEEEecCCch-----hhhhhhhcchHHHHHHHHH
Q 001008 710 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPD-----MEALEKQGDKENITKVSLE 784 (1191)
Q Consensus 710 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~-----~~~~~~~~~~~~~~~~~~~ 784 (1191)
.+.+.+.++|++|+++||+++++||++...+..+++.+|+.. ..+..++.... ...+..............
T Consensus 15 ~i~~~~~~al~~l~~~Gi~~~~aTGR~~~~~~~~~~~l~~~~---~~i~~nGa~i~~~~~~~~~~~~~~~~~~~~~~~~- 90 (225)
T TIGR01482 15 AINESALEAIRKAESVGIPVVLVTGNSVQFARALAKLIGTPD---PVIAENGGEISYNEGMDDIFLAYLEEEWFLDIVI- 90 (225)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCCC---eEEEecCcEEEeCCCCceEEecccCHHHHHHHHH-
Confidence 367888999999999999999999999999999999998421 22222222100 000000000000000000
Q ss_pred HHHHHHHhhcccccccc-cccceeEEEEeCchhhHHhHHHHHHHHHHHHhhcCceEEEcCCh--hhHHHHHHHh-hcCC-
Q 001008 785 SVTKQIREGISQVNSAK-ESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSP--KQKALVTRLV-KGTG- 859 (1191)
Q Consensus 785 ~~~~~~~~~~~~~~~~~-~~~~~~~lvi~G~~l~~~~~~~~~~~~~~l~~~~~~~v~~r~sP--~qK~~iV~~l-~~~g- 859 (1191)
........+.... .......+.... ..... ..+.+.+..-...+....+....| ..|...++.+ +..|
T Consensus 91 ----~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~--~~~~~~~~~~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~~i 163 (225)
T TIGR01482 91 ----AKTFPFSRLKVQYPRRASLVKMRYGI-DVDTV--REIIKELGLNLVAVDSGFDIHILPQGVNKGVAVKKLKEKLGI 163 (225)
T ss_pred ----hcccchhhhccccccccceEEEeecC-CHHHH--HHHHHhcCceEEEecCCcEEEEeeCCCCHHHHHHHHHHHhCC
Confidence 0000000000000 001111122211 11110 111111110000000112334444 3788888888 5555
Q ss_pred --CEEEEEcCCccChHhhhhcceeEEeccCccchhhhccceeccc
Q 001008 860 --KTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAIAQ 902 (1191)
Q Consensus 860 --~~vl~iGDG~ND~~ml~~AdvGI~i~g~e~~~a~~~aD~vl~~ 902 (1191)
..+++|||+.||++|++.|++|++|.+... .++..||++..+
T Consensus 164 ~~~~~i~~GD~~NDi~m~~~ag~~vam~Na~~-~~k~~A~~vt~~ 207 (225)
T TIGR01482 164 KPGETLVCGDSENDIDLFEVPGFGVAVANAQP-ELKEWADYVTES 207 (225)
T ss_pred CHHHEEEECCCHhhHHHHHhcCceEEcCChhH-HHHHhcCeecCC
Confidence 569999999999999999999999965433 378999998754
No 47
>PRK01158 phosphoglycolate phosphatase; Provisional
Probab=98.43 E-value=6.5e-07 Score=97.73 Aligned_cols=181 Identities=19% Similarity=0.221 Sum_probs=95.4
Q ss_pred ccCCcHHHHHHHHHcCCeEEEEeCCCHhhHHHHHHHcCccccCceEEEEecCCch----hhhhhhhcchHHHHHHHHHHH
Q 001008 711 LQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPD----MEALEKQGDKENITKVSLESV 786 (1191)
Q Consensus 711 lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~----~~~~~~~~~~~~~~~~~~~~~ 786 (1191)
+.+.+.++|++|++.|++++++||++...+..+++.+|+-. .++..++.-.. ...+.. .......... +..
T Consensus 21 i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~---~~i~~nGa~i~~~~~~~~~~~-~~~~~~~~~~-~~~ 95 (230)
T PRK01158 21 LSLKAVEAIRKAEKLGIPVILATGNVLCFARAAAKLIGTSG---PVIAENGGVISVGFDGKRIFL-GDIEECEKAY-SEL 95 (230)
T ss_pred cCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCCC---cEEEecCeEEEEcCCCCEEEE-cchHHHHHHH-HHH
Confidence 67889999999999999999999999999999999988632 22222221100 000000 0001111000 001
Q ss_pred HHHHHhhcccccccccccceeEEEE-eCchhhHHhHHHHHHHHHHHHhh---cCceEEEcCChh--hHHHHHHHh-hcCC
Q 001008 787 TKQIREGISQVNSAKESKVTFGLVI-DGKSLDFALDKKLEKMFLDLAID---CASVICCRSSPK--QKALVTRLV-KGTG 859 (1191)
Q Consensus 787 ~~~~~~~~~~~~~~~~~~~~~~lvi-~G~~l~~~~~~~~~~~~~~l~~~---~~~~v~~r~sP~--qK~~iV~~l-~~~g 859 (1191)
......................+.+ ..... ++..+.+.+.... ..+..+....|. .|...++.+ +..|
T Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~l~~~~~~~~~~~~~~~~ei~~~~~~Kg~al~~l~~~~~ 170 (230)
T PRK01158 96 KKRFPEASTSLTKLDPDYRKTEVALRRTVPV-----EEVRELLEELGLDLEIVDSGFAIHIKSPGVNKGTGLKKLAELMG 170 (230)
T ss_pred HHhccccceeeecCCcccccceeeecccccH-----HHHHHHHHHcCCcEEEEecceEEEEeeCCCChHHHHHHHHHHhC
Confidence 0000000000000000000011111 11111 1222222211100 011123345554 488888888 5544
Q ss_pred ---CEEEEEcCCccChHhhhhcceeEEeccCccchhhhccceeccc
Q 001008 860 ---KTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAIAQ 902 (1191)
Q Consensus 860 ---~~vl~iGDG~ND~~ml~~AdvGI~i~g~e~~~a~~~aD~vl~~ 902 (1191)
..++++|||.||.+|++.|++|++|.+.. ..++..||++..+
T Consensus 171 i~~~~~i~~GD~~NDi~m~~~ag~~vam~Na~-~~vk~~a~~v~~~ 215 (230)
T PRK01158 171 IDPEEVAAIGDSENDLEMFEVAGFGVAVANAD-EELKEAADYVTEK 215 (230)
T ss_pred CCHHHEEEECCchhhHHHHHhcCceEEecCcc-HHHHHhcceEecC
Confidence 46999999999999999999999995544 3478899998864
No 48
>PRK10976 putative hydrolase; Provisional
Probab=98.41 E-value=3.3e-07 Score=102.49 Aligned_cols=61 Identities=26% Similarity=0.248 Sum_probs=47.7
Q ss_pred EcCChh--hHHHHHHHh-hcCC---CEEEEEcCCccChHhhhhcceeEEeccCccchhhhccc--eeccc
Q 001008 841 CRSSPK--QKALVTRLV-KGTG---KTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSD--YAIAQ 902 (1191)
Q Consensus 841 ~r~sP~--qK~~iV~~l-~~~g---~~vl~iGDG~ND~~ml~~AdvGI~i~g~e~~~a~~~aD--~vl~~ 902 (1191)
..+.|. .|+.-++.+ +..| ..|+++|||.||++||+.|+.||+|.+.. ..++..|| ++..+
T Consensus 182 ~eI~~~gvsKg~al~~l~~~lgi~~~~viafGD~~NDi~Ml~~ag~~vAm~NA~-~~vK~~A~~~~v~~~ 250 (266)
T PRK10976 182 LEVMAGGVSKGHALEAVAKKLGYSLKDCIAFGDGMNDAEMLSMAGKGCIMGNAH-QRLKDLLPELEVIGS 250 (266)
T ss_pred EEEEcCCCChHHHHHHHHHHcCCCHHHeEEEcCCcccHHHHHHcCCCeeecCCc-HHHHHhCCCCeeccc
Confidence 345554 699999998 6666 56999999999999999999999995543 33788887 55543
No 49
>PLN02887 hydrolase family protein
Probab=98.40 E-value=3.3e-07 Score=110.91 Aligned_cols=55 Identities=31% Similarity=0.427 Sum_probs=46.5
Q ss_pred hHHHHHHHh-hcCC---CEEEEEcCCccChHhhhhcceeEEeccCccchhhhccceeccc
Q 001008 847 QKALVTRLV-KGTG---KTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAIAQ 902 (1191)
Q Consensus 847 qK~~iV~~l-~~~g---~~vl~iGDG~ND~~ml~~AdvGI~i~g~e~~~a~~~aD~vl~~ 902 (1191)
.|+.-++.+ +..| ..|++||||.||++||+.|+.||+|.+.. ..++..||++..+
T Consensus 507 SKG~ALk~L~e~lGI~~eeviAFGDs~NDIeMLe~AG~gVAMgNA~-eeVK~~Ad~VT~s 565 (580)
T PLN02887 507 SKGNGVKMLLNHLGVSPDEIMAIGDGENDIEMLQLASLGVALSNGA-EKTKAVADVIGVS 565 (580)
T ss_pred CHHHHHHHHHHHcCCCHHHEEEEecchhhHHHHHHCCCEEEeCCCC-HHHHHhCCEEeCC
Confidence 799999988 6666 46999999999999999999999995543 3488999998754
No 50
>PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification []. This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A ....
Probab=98.37 E-value=6.4e-07 Score=99.07 Aligned_cols=56 Identities=23% Similarity=0.349 Sum_probs=46.6
Q ss_pred hhHHHHHHHh-hcCC---CEEEEEcCCccChHhhhhcceeEEeccCccchhhhccceeccc
Q 001008 846 KQKALVTRLV-KGTG---KTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAIAQ 902 (1191)
Q Consensus 846 ~qK~~iV~~l-~~~g---~~vl~iGDG~ND~~ml~~AdvGI~i~g~e~~~a~~~aD~vl~~ 902 (1191)
..|+..++.+ +..| ..++++||+.||.+||+.|+.|++|.+.... .+..||++...
T Consensus 185 vsK~~ai~~l~~~~~i~~~~~~~~GD~~ND~~Ml~~~~~~~am~na~~~-~k~~a~~i~~~ 244 (254)
T PF08282_consen 185 VSKGSAIKYLLEYLGISPEDIIAFGDSENDIEMLELAGYSVAMGNATPE-LKKAADYITPS 244 (254)
T ss_dssp SSHHHHHHHHHHHHTTSGGGEEEEESSGGGHHHHHHSSEEEEETTS-HH-HHHHSSEEESS
T ss_pred CCHHHHHHHHhhhcccccceeEEeecccccHhHHhhcCeEEEEcCCCHH-HHHhCCEEecC
Confidence 4899999888 5554 5799999999999999999999999655433 78999998875
No 51
>TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal. TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases.
Probab=98.30 E-value=1.6e-06 Score=93.52 Aligned_cols=177 Identities=15% Similarity=0.185 Sum_probs=95.5
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEeCCCHhhHHHHHHHcCccccCceEEEEecCCc----hhhhhhhhcchHHHHHHHHHH
Q 001008 710 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSP----DMEALEKQGDKENITKVSLES 785 (1191)
Q Consensus 710 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~----~~~~~~~~~~~~~~~~~~~~~ 785 (1191)
++.+.+.++|++|+++|++++++||++...+..+++.+++.. ..+..++.-. ....+.... ...+......
T Consensus 18 ~i~~~~~~~i~~l~~~g~~~~~~TGR~~~~~~~~~~~l~~~~---~~i~~NGa~i~~~~~~~~~~~~~-~~~~~~~~~~- 92 (215)
T TIGR01487 18 MISERAIEAIRKAEKKGIPVSLVTGNTVPFARALAVLIGTSG---PVVAENGGVIFYNKEDIFLANME-EEWFLDEEKK- 92 (215)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCcchhHHHHHHHhCCCC---cEEEccCcEEEeCCCcEEEeccc-chhhHHHhhh-
Confidence 478899999999999999999999999999999999988632 2222221110 000000000 0001000000
Q ss_pred HHHHHHhhcccccccccccceeEEEEeCchhhHHhHHHHHHHHHHHHhh-cCceEEEcCC--hhhHHHHHHHh-hcCC--
Q 001008 786 VTKQIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAID-CASVICCRSS--PKQKALVTRLV-KGTG-- 859 (1191)
Q Consensus 786 ~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~l~~~-~~~~v~~r~s--P~qK~~iV~~l-~~~g-- 859 (1191)
.. .. ........ ......+..+++... .+.+.+...... ..+..+..++ ...|+..++.+ +..|
T Consensus 93 ~~-~~---~~~~~~~~-~~~~~~~~~~~~~~~-----~~~~~l~~~~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~~i~ 162 (215)
T TIGR01487 93 KR-FP---RDRLSNEY-PRASLVIMREGKDVD-----EVREIIKERGLNLVDSGFAIHIMKKGVDKGVGVEKLKELLGIK 162 (215)
T ss_pred hh-hh---hhhccccc-ceeEEEEecCCccHH-----HHHHHHHhCCeEEEecCceEEEecCCCChHHHHHHHHHHhCCC
Confidence 00 00 00000000 011112222332222 111111111000 0000122333 35899999988 5555
Q ss_pred -CEEEEEcCCccChHhhhhcceeEEeccCccchhhhccceeccc
Q 001008 860 -KTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAIAQ 902 (1191)
Q Consensus 860 -~~vl~iGDG~ND~~ml~~AdvGI~i~g~e~~~a~~~aD~vl~~ 902 (1191)
..++++||+.||.+|++.|+.|++|.+. ..+++..||++..+
T Consensus 163 ~~~~i~iGDs~ND~~ml~~ag~~vam~na-~~~~k~~A~~v~~~ 205 (215)
T TIGR01487 163 PEEVAAIGDSENDIDLFRVVGFKVAVANA-DDQLKEIADYVTSN 205 (215)
T ss_pred HHHEEEECCCHHHHHHHHhCCCeEEcCCc-cHHHHHhCCEEcCC
Confidence 3599999999999999999999999554 34488899998853
No 52
>TIGR00338 serB phosphoserine phosphatase SerB. Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins.
Probab=98.28 E-value=3.1e-06 Score=91.64 Aligned_cols=122 Identities=22% Similarity=0.302 Sum_probs=85.4
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEeCCCHhhHHHHHHHcCccccCceEEEEecCCchhhhhhhhcchHHHHHHHHHHHHHH
Q 001008 710 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQ 789 (1191)
Q Consensus 710 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 (1191)
++.+++.+.++.|++.|+++.++||.....+..+.+.+|+..--...+..+..
T Consensus 85 ~~~~g~~~~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~~i~~~~~~~~~~~~~--------------------------- 137 (219)
T TIGR00338 85 PLTEGAEELVKTLKEKGYKVAVISGGFDLFAEHVKDKLGLDAAFANRLEVEDG--------------------------- 137 (219)
T ss_pred CcCCCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCceEeeEEEEECC---------------------------
Confidence 58999999999999999999999999999999999999884311000000000
Q ss_pred HHhhcccccccccccceeEEEEeCchhhHHhHHHHHHHHHHHHhhcCceEEEc-CChhhHHHHHHHh-hcCC---CEEEE
Q 001008 790 IREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCR-SSPKQKALVTRLV-KGTG---KTTLA 864 (1191)
Q Consensus 790 ~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~l~~~~~~~v~~r-~sP~qK~~iV~~l-~~~g---~~vl~ 864 (1191)
.++|. +.++ ..+..|..+++.+ +..+ ..+++
T Consensus 138 --------------------~~~~~------------------------~~~~~~~~~~k~~~~~~~~~~~~~~~~~~i~ 173 (219)
T TIGR00338 138 --------------------KLTGL------------------------VEGPIVDASYKGKTLLILLRKEGISPENTVA 173 (219)
T ss_pred --------------------EEEEE------------------------ecCcccCCcccHHHHHHHHHHcCCCHHHEEE
Confidence 00000 1111 1123356666655 3333 35889
Q ss_pred EcCCccChHhhhhcceeEEeccCccchhhhccceeccchh
Q 001008 865 IGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAIAQFR 904 (1191)
Q Consensus 865 iGDG~ND~~ml~~AdvGI~i~g~e~~~a~~~aD~vl~~f~ 904 (1191)
|||+.+|+.|.+.|++++++.+.+. ..++||+++.+.+
T Consensus 174 iGDs~~Di~aa~~ag~~i~~~~~~~--~~~~a~~~i~~~~ 211 (219)
T TIGR00338 174 VGDGANDLSMIKAAGLGIAFNAKPK--LQQKADICINKKD 211 (219)
T ss_pred EECCHHHHHHHHhCCCeEEeCCCHH--HHHhchhccCCCC
Confidence 9999999999999999999977654 6689999998654
No 53
>PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=98.21 E-value=5.7e-06 Score=92.60 Aligned_cols=39 Identities=10% Similarity=0.130 Sum_probs=35.9
Q ss_pred ccCCcHHHHHHHHHcCCeEEEEeCCCHhhHHHHHHHcCc
Q 001008 711 LQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSL 749 (1191)
Q Consensus 711 lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gl 749 (1191)
+-+.+.++|++|+++|++++++||+....+..+++++|+
T Consensus 25 i~~~~~~ai~~l~~~Gi~~viaTGR~~~~i~~~~~~l~~ 63 (271)
T PRK03669 25 DWQPAAPWLTRLREAQVPVILCSSKTAAEMLPLQQTLGL 63 (271)
T ss_pred CcHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHhCC
Confidence 446688999999999999999999999999999999987
No 54
>PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional
Probab=98.19 E-value=3.6e-06 Score=94.45 Aligned_cols=56 Identities=27% Similarity=0.408 Sum_probs=45.5
Q ss_pred hhHHHHHHHh-hcCC---CEEEEEcCCccChHhhhhcceeEEeccCccchhhhccceeccc
Q 001008 846 KQKALVTRLV-KGTG---KTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAIAQ 902 (1191)
Q Consensus 846 ~qK~~iV~~l-~~~g---~~vl~iGDG~ND~~ml~~AdvGI~i~g~e~~~a~~~aD~vl~~ 902 (1191)
..|...++.+ +..| ..+++|||+.||++|++.|++||+|.+. ....+..||++..+
T Consensus 198 ~~K~~~l~~l~~~~gi~~~e~i~~GD~~NDi~m~~~ag~~vamgna-~~~lk~~Ad~v~~~ 257 (272)
T PRK10530 198 NSKGKRLTQWVEAQGWSMKNVVAFGDNFNDISMLEAAGLGVAMGNA-DDAVKARADLVIGD 257 (272)
T ss_pred CChHHHHHHHHHHcCCCHHHeEEeCCChhhHHHHHhcCceEEecCc-hHHHHHhCCEEEec
Confidence 3688888877 6655 4699999999999999999999999543 34467889998865
No 55
>TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family. This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta
Probab=98.16 E-value=1.1e-05 Score=89.61 Aligned_cols=39 Identities=18% Similarity=0.137 Sum_probs=35.6
Q ss_pred ccCCcHHHHHHHHHcCCeEEEEeCCCHhhHHHHHHHcCc
Q 001008 711 LQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSL 749 (1191)
Q Consensus 711 lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gl 749 (1191)
.-+.+.++|+.|+++|++++++||+....+..+.+++|+
T Consensus 17 ~~~~~~~~i~~l~~~g~~~~~~TgR~~~~~~~~~~~~~~ 55 (256)
T TIGR01486 17 DWGPAKEVLERLQELGIPVIPCTSKTAAEVEYLRKELGL 55 (256)
T ss_pred CchHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCC
Confidence 344689999999999999999999999999999999986
No 56
>TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family. The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved.
Probab=98.07 E-value=1.4e-05 Score=81.00 Aligned_cols=95 Identities=17% Similarity=0.226 Sum_probs=70.6
Q ss_pred HHHHHHHcCCeEEEEeCCCHhhHHHHHHHcCccccCceEEEEecCCchhhhhhhhcchHHHHHHHHHHHHHHHHhhcccc
Q 001008 718 CIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQIREGISQV 797 (1191)
Q Consensus 718 ~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 797 (1191)
+|+.|++.|+++.++||++...+..+.+..|+-.-
T Consensus 36 ~i~~Lk~~G~~i~IvTn~~~~~~~~~l~~~gi~~~--------------------------------------------- 70 (154)
T TIGR01670 36 GIRCALKSGIEVAIITGRKAKLVEDRCKTLGITHL--------------------------------------------- 70 (154)
T ss_pred HHHHHHHCCCEEEEEECCCCHHHHHHHHHcCCCEE---------------------------------------------
Confidence 89999999999999999999999999999887310
Q ss_pred cccccccceeEEEEeCchhhHHhHHHHHHHHHHHHhhcCceEEEcCChhhHHHHHHHh-hcC---CCEEEEEcCCccChH
Q 001008 798 NSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLV-KGT---GKTTLAIGDGANDVG 873 (1191)
Q Consensus 798 ~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~l~~~~~~~v~~r~sP~qK~~iV~~l-~~~---g~~vl~iGDG~ND~~ 873 (1191)
+++ . ..|...++.+ +.. ...++++||+.||++
T Consensus 71 -------------~~~-----------------------------~--~~k~~~~~~~~~~~~~~~~~~~~vGDs~~D~~ 106 (154)
T TIGR01670 71 -------------YQG-----------------------------Q--SNKLIAFSDILEKLALAPENVAYIGDDLIDWP 106 (154)
T ss_pred -------------Eec-----------------------------c--cchHHHHHHHHHHcCCCHHHEEEECCCHHHHH
Confidence 000 0 1233333333 322 256999999999999
Q ss_pred hhhhcceeEEeccCccchhhhccceeccc
Q 001008 874 MLQEADIGVGISGVEGMQAVMSSDYAIAQ 902 (1191)
Q Consensus 874 ml~~AdvGI~i~g~e~~~a~~~aD~vl~~ 902 (1191)
|++.|++++++..... ..+..||+++..
T Consensus 107 ~~~~ag~~~~v~~~~~-~~~~~a~~i~~~ 134 (154)
T TIGR01670 107 VMEKVGLSVAVADAHP-LLIPRADYVTRI 134 (154)
T ss_pred HHHHCCCeEecCCcCH-HHHHhCCEEecC
Confidence 9999999999965543 267778988853
No 57
>KOG1615 consensus Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=98.07 E-value=5.5e-06 Score=82.26 Aligned_cols=128 Identities=20% Similarity=0.314 Sum_probs=84.8
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEeCCCHhhHHHHHHHcCccccCce--EEEEecCCchhhhhhhhcchHHHHHHHHHHHH
Q 001008 710 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMK--QIVITLDSPDMEALEKQGDKENITKVSLESVT 787 (1191)
Q Consensus 710 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~--~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 787 (1191)
.+-+|++|.++.|++.|.++.++||--...+..+|.++||-..+.. .+..+....
T Consensus 88 ~lT~Gi~eLv~~L~~~~~~v~liSGGF~~~i~~Va~~Lgi~~~n~yAN~l~fd~~Gk----------------------- 144 (227)
T KOG1615|consen 88 TLTPGIRELVSRLHARGTQVYLISGGFRQLIEPVAEQLGIPKSNIYANELLFDKDGK----------------------- 144 (227)
T ss_pred ccCCCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHHhCCcHhhhhhheeeeccCCc-----------------------
Confidence 3679999999999999999999999999999999999999543321 111110000
Q ss_pred HHHHhhcccccccccccceeEEEEeCchhhHHhHHHHHHHHHHHHhhcCceEEEcCChhhHHHHHHHhhc--CCCEEEEE
Q 001008 788 KQIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLVKG--TGKTTLAI 865 (1191)
Q Consensus 788 ~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~l~~~~~~~v~~r~sP~qK~~iV~~l~~--~g~~vl~i 865 (1191)
...++... .-+...-|+.++..+++ .-+.++||
T Consensus 145 ----------------------~~gfd~~~-----------------------ptsdsggKa~~i~~lrk~~~~~~~~mv 179 (227)
T KOG1615|consen 145 ----------------------YLGFDTNE-----------------------PTSDSGGKAEVIALLRKNYNYKTIVMV 179 (227)
T ss_pred ----------------------ccccccCC-----------------------ccccCCccHHHHHHHHhCCChheeEEe
Confidence 00000000 01123378899999943 23689999
Q ss_pred cCCccChHhhhhcceeEEeccCccch-hhhccceeccchhh
Q 001008 866 GDGANDVGMLQEADIGVGISGVEGMQ-AVMSSDYAIAQFRF 905 (1191)
Q Consensus 866 GDG~ND~~ml~~AdvGI~i~g~e~~~-a~~~aD~vl~~f~~ 905 (1191)
|||+||.+|+..||.=||..|....+ .+..|+.-+.+|..
T Consensus 180 GDGatDlea~~pa~afi~~~g~~~r~~vk~nak~~~~~f~~ 220 (227)
T KOG1615|consen 180 GDGATDLEAMPPADAFIGFGGNVIREGVKANAKWYVTDFYV 220 (227)
T ss_pred cCCccccccCCchhhhhccCCceEcHhhHhccHHHHHHHHH
Confidence 99999999999988877765543321 33445555555443
No 58
>TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily. The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences.
Probab=98.03 E-value=6.7e-06 Score=91.33 Aligned_cols=60 Identities=27% Similarity=0.449 Sum_probs=47.9
Q ss_pred cCChh--hHHHHHHHh-hcCC---CEEEEEcCCccChHhhhhcceeEEeccCccchhhhccceeccc
Q 001008 842 RSSPK--QKALVTRLV-KGTG---KTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAIAQ 902 (1191)
Q Consensus 842 r~sP~--qK~~iV~~l-~~~g---~~vl~iGDG~ND~~ml~~AdvGI~i~g~e~~~a~~~aD~vl~~ 902 (1191)
.+.|. .|+.-++.+ +..| ..++++||+.||++|++.|+.|++|.+. ...++..||+++.+
T Consensus 181 eI~~~~~~K~~~i~~~~~~~~~~~~~~~~~GD~~nD~~m~~~~~~~~a~~na-~~~~k~~a~~~~~~ 246 (256)
T TIGR00099 181 EITAKGVSKGSALQSLAEALGISLEDVIAFGDGMNDIEMLEAAGYGVAMGNA-DEELKALADYVTDS 246 (256)
T ss_pred EecCCCCChHHHHHHHHHHcCCCHHHEEEeCCcHHhHHHHHhCCceeEecCc-hHHHHHhCCEEecC
Confidence 44554 699999998 5554 5799999999999999999999999543 33478889998765
No 59
>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B.
Probab=98.00 E-value=2e-05 Score=83.32 Aligned_cols=39 Identities=26% Similarity=0.259 Sum_probs=35.8
Q ss_pred CCcHHHHHHHHHcCCeEEEEeCCCHhhHHHHHHHcCccc
Q 001008 713 KGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLR 751 (1191)
Q Consensus 713 ~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gl~~ 751 (1191)
+++.+.|+.++++|++++++||+....+..+++.+|+..
T Consensus 92 ~~~~e~i~~~~~~~~~v~IvS~~~~~~i~~~~~~~~i~~ 130 (192)
T PF12710_consen 92 PDAMELIRELKDNGIKVVIVSGSPDEIIEPIAERLGIDD 130 (192)
T ss_dssp TTHHHHHHHHHHTTSEEEEEEEEEHHHHHHHHHHTTSSE
T ss_pred hhHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCc
Confidence 555599999999999999999999999999999999954
No 60
>PRK13582 thrH phosphoserine phosphatase; Provisional
Probab=98.00 E-value=3.3e-05 Score=82.66 Aligned_cols=126 Identities=22% Similarity=0.224 Sum_probs=86.2
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEeCCCHhhHHHHHHHcCccccCceEEEEecCCchhhhhhhhcchHHHHHHHHHHHHHH
Q 001008 710 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQ 789 (1191)
Q Consensus 710 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 (1191)
++.||+.++++.|+++ +++.++||.....+..+..++|+..--...+....+.
T Consensus 68 ~~~pg~~e~L~~L~~~-~~~~IvS~~~~~~~~~~l~~~gl~~~f~~~~~~~~~~-------------------------- 120 (205)
T PRK13582 68 DPLPGAVEFLDWLRER-FQVVILSDTFYEFAGPLMRQLGWPTLFCHSLEVDEDG-------------------------- 120 (205)
T ss_pred CCCCCHHHHHHHHHhc-CCEEEEeCCcHHHHHHHHHHcCCchhhcceEEECCCC--------------------------
Confidence 3579999999999999 9999999999999999999998832100001010000
Q ss_pred HHhhcccccccccccceeEEEEeCchhhHHhHHHHHHHHHHHHhhcCceEEEcCChhhHHHHHHHhhcCCCEEEEEcCCc
Q 001008 790 IREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLVKGTGKTTLAIGDGA 869 (1191)
Q Consensus 790 ~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~l~~~~~~~v~~r~sP~qK~~iV~~l~~~g~~vl~iGDG~ 869 (1191)
.+.|. . -..|..|...++.++..+..++|||||.
T Consensus 121 --------------------~i~~~------------------------~--~~~p~~k~~~l~~~~~~~~~~v~iGDs~ 154 (205)
T PRK13582 121 --------------------MITGY------------------------D--LRQPDGKRQAVKALKSLGYRVIAAGDSY 154 (205)
T ss_pred --------------------eEECc------------------------c--ccccchHHHHHHHHHHhCCeEEEEeCCH
Confidence 00010 0 0136678788887766678899999999
Q ss_pred cChHhhhhcceeEEeccCccchhhhccce-eccchhhhhHh
Q 001008 870 NDVGMLQEADIGVGISGVEGMQAVMSSDY-AIAQFRFLERL 909 (1191)
Q Consensus 870 ND~~ml~~AdvGI~i~g~e~~~a~~~aD~-vl~~f~~l~~l 909 (1191)
||++|.++|++|+.....+.. ....++. ++.+++.+..+
T Consensus 155 ~D~~~~~aa~~~v~~~~~~~~-~~~~~~~~~~~~~~el~~~ 194 (205)
T PRK13582 155 NDTTMLGEADAGILFRPPANV-IAEFPQFPAVHTYDELLAA 194 (205)
T ss_pred HHHHHHHhCCCCEEECCCHHH-HHhCCcccccCCHHHHHHH
Confidence 999999999999987544332 2234555 67776665544
No 61
>TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit. Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases.
Probab=97.99 E-value=2.2e-05 Score=80.28 Aligned_cols=98 Identities=14% Similarity=0.162 Sum_probs=71.9
Q ss_pred HHHHHHHHcCCeEEEEeCCCHhhHHHHHHHcCccccCceEEEEecCCchhhhhhhhcchHHHHHHHHHHHHHHHHhhccc
Q 001008 717 ECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQIREGISQ 796 (1191)
Q Consensus 717 ~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 (1191)
..|+.|+++|+++.++|+.+...+..+...+|+..
T Consensus 41 ~~~~~L~~~Gi~laIiT~k~~~~~~~~l~~lgi~~--------------------------------------------- 75 (169)
T TIGR02726 41 MGVIVLQLCGIDVAIITSKKSGAVRHRAEELKIKR--------------------------------------------- 75 (169)
T ss_pred HHHHHHHHCCCEEEEEECCCcHHHHHHHHHCCCcE---------------------------------------------
Confidence 58999999999999999999999999999999831
Q ss_pred ccccccccceeEEEEeCchhhHHhHHHHHHHHHHHHhhcCceEEEcCC--hhhHHHHHHHhhcCCCEEEEEcCCccChHh
Q 001008 797 VNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSS--PKQKALVTRLVKGTGKTTLAIGDGANDVGM 874 (1191)
Q Consensus 797 ~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~l~~~~~~~v~~r~s--P~qK~~iV~~l~~~g~~vl~iGDG~ND~~m 874 (1191)
.|.... |+--..+++.+.-....+++|||+.||++|
T Consensus 76 ------------------------------------------~f~~~kpkp~~~~~~~~~l~~~~~ev~~iGD~~nDi~~ 113 (169)
T TIGR02726 76 ------------------------------------------FHEGIKKKTEPYAQMLEEMNISDAEVCYVGDDLVDLSM 113 (169)
T ss_pred ------------------------------------------EEecCCCCHHHHHHHHHHcCcCHHHEEEECCCHHHHHH
Confidence 111111 221122222222122569999999999999
Q ss_pred hhhcceeEEeccCccchhhhccceeccc
Q 001008 875 LQEADIGVGISGVEGMQAVMSSDYAIAQ 902 (1191)
Q Consensus 875 l~~AdvGI~i~g~e~~~a~~~aD~vl~~ 902 (1191)
++.|++++++.+... +++..|+++...
T Consensus 114 ~~~ag~~~am~nA~~-~lk~~A~~I~~~ 140 (169)
T TIGR02726 114 MKRVGLAVAVGDAVA-DVKEAAAYVTTA 140 (169)
T ss_pred HHHCCCeEECcCchH-HHHHhCCEEcCC
Confidence 999999999966543 378889998753
No 62
>TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.
Probab=97.95 E-value=3.4e-05 Score=85.18 Aligned_cols=179 Identities=13% Similarity=0.147 Sum_probs=92.1
Q ss_pred cccccCCcHHHHHHHHHcCCeEEEEeCCCHhhHHHHHHHcCccccCceEEEEecCCchhh--hhhhhcchHHHHHHHHHH
Q 001008 708 EDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDME--ALEKQGDKENITKVSLES 785 (1191)
Q Consensus 708 eD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~--~~~~~~~~~~~~~~~~~~ 785 (1191)
..+..+...++++++++.|++++++||+....+..+.++.++..++ ..+.-++...... ......-...+.......
T Consensus 19 ~~~~~~~~~~~i~~~~~~gi~fv~aTGR~~~~~~~~~~~~~~~~p~-~~I~~NGa~I~~~~~~~~~~~~~~~~~~~~~~~ 97 (249)
T TIGR01485 19 DNQALLRLNALLEDHRGEDSLLVYSTGRSPHSYKELQKQKPLLTPD-IWVTSVGSEIYYGGAEVPDQHWAEYLSEKWQRD 97 (249)
T ss_pred ChHHHHHHHHHHHHhhccCceEEEEcCCCHHHHHHHHhcCCCCCCC-EEEEcCCceEEeCCCCcCCHHHHHHHhcccCHH
Confidence 4567789999999999999999999999999999999988876543 1221111110000 000000000010000000
Q ss_pred HHHHHHhhccccccc---ccccceeEEEEeCchhhHHhHHHHHHHHHHHHhhcCceEEE----cCCh--hhHHHHHHHh-
Q 001008 786 VTKQIREGISQVNSA---KESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICC----RSSP--KQKALVTRLV- 855 (1191)
Q Consensus 786 ~~~~~~~~~~~~~~~---~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~l~~~~~~~v~~----r~sP--~qK~~iV~~l- 855 (1191)
....+......+... .....+..+..+.+..... ..++.+.+......+..++.. .+.| ..|...++.+
T Consensus 98 ~~~~~~~~~~~l~~~~~~~~~~~k~~~~~~~~~~~~~-~~~l~~~l~~~~~~~~~~~~~~~~ldi~~~~~~K~~al~~l~ 176 (249)
T TIGR01485 98 IVVAITDKFEELKPQPDLEQRPHKVSFFLDPEAAPEV-IKQLTEMLKETGLDVKLIYSSGKDLDILPQGSGKGQALQYLL 176 (249)
T ss_pred HHHHHHhcCcccccCCccccCCeeEEEEechhhhhHH-HHHHHHHHHhcCCCEEEEEECCceEEEEeCCCChHHHHHHHH
Confidence 011111111111111 0111222222222221111 122333333221122211211 3444 4799889988
Q ss_pred hcCC---CEEEEEcCCccChHhhhh-cceeEEeccCc
Q 001008 856 KGTG---KTTLAIGDGANDVGMLQE-ADIGVGISGVE 888 (1191)
Q Consensus 856 ~~~g---~~vl~iGDG~ND~~ml~~-AdvGI~i~g~e 888 (1191)
+..| ..|+++||+.||++|++. ++.||+|.+..
T Consensus 177 ~~~~i~~~~~i~~GD~~ND~~ml~~~~~~~va~~na~ 213 (249)
T TIGR01485 177 QKLAMEPSQTLVCGDSGNDIELFEIGSVRGVIVSNAQ 213 (249)
T ss_pred HHcCCCccCEEEEECChhHHHHHHccCCcEEEECCCH
Confidence 5544 579999999999999998 67999996543
No 63
>PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional
Probab=97.92 E-value=2.8e-05 Score=81.33 Aligned_cols=110 Identities=19% Similarity=0.229 Sum_probs=77.3
Q ss_pred HHHHHHHHcCCeEEEEeCCCHhhHHHHHHHcCccccCceEEEEecCCchhhhhhhhcchHHHHHHHHHHHHHHHHhhccc
Q 001008 717 ECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQIREGISQ 796 (1191)
Q Consensus 717 ~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 (1191)
.+|+.|++.|+++.++||.....+..+++++|+..
T Consensus 55 ~~i~~L~~~Gi~v~I~T~~~~~~v~~~l~~lgl~~--------------------------------------------- 89 (183)
T PRK09484 55 YGIRCLLTSGIEVAIITGRKSKLVEDRMTTLGITH--------------------------------------------- 89 (183)
T ss_pred HHHHHHHHCCCEEEEEeCCCcHHHHHHHHHcCCce---------------------------------------------
Confidence 68999999999999999999999999999998731
Q ss_pred ccccccccceeEEEEeCchhhHHhHHHHHHHHHHHHhhcCceEEEcCChhhHHHHHHHh-hcCC---CEEEEEcCCccCh
Q 001008 797 VNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLV-KGTG---KTTLAIGDGANDV 872 (1191)
Q Consensus 797 ~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~l~~~~~~~v~~r~sP~qK~~iV~~l-~~~g---~~vl~iGDG~ND~ 872 (1191)
+|. ....|...++.+ +..| ..+++|||+.||+
T Consensus 90 ------------------------------------------~f~--g~~~k~~~l~~~~~~~gl~~~ev~~VGDs~~D~ 125 (183)
T PRK09484 90 ------------------------------------------LYQ--GQSNKLIAFSDLLEKLAIAPEQVAYIGDDLIDW 125 (183)
T ss_pred ------------------------------------------eec--CCCcHHHHHHHHHHHhCCCHHHEEEECCCHHHH
Confidence 000 011233444444 4333 4699999999999
Q ss_pred HhhhhcceeEEeccCccchhhhccceeccc------hhhhhHhh-hhhchh
Q 001008 873 GMLQEADIGVGISGVEGMQAVMSSDYAIAQ------FRFLERLL-LVHGHW 916 (1191)
Q Consensus 873 ~ml~~AdvGI~i~g~e~~~a~~~aD~vl~~------f~~l~~ll-l~~GR~ 916 (1191)
+|++.|++++++...+ ..+...||+++.. .+.+..++ ...|+|
T Consensus 126 ~~a~~aG~~~~v~~~~-~~~~~~a~~v~~~~~g~g~~~el~~~i~~~~~~~ 175 (183)
T PRK09484 126 PVMEKVGLSVAVADAH-PLLLPRADYVTRIAGGRGAVREVCDLLLLAQGKL 175 (183)
T ss_pred HHHHHCCCeEecCChh-HHHHHhCCEEecCCCCCCHHHHHHHHHHHhcCCh
Confidence 9999999999874332 2356778999852 44455543 234443
No 64
>TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial. Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472.
Probab=97.90 E-value=6.4e-05 Score=82.34 Aligned_cols=54 Identities=26% Similarity=0.316 Sum_probs=43.6
Q ss_pred CChh--hHHHHHHHh-hcCC---CEEEEEcCCccChHhhhhcceeEEeccCccchhhhccc
Q 001008 843 SSPK--QKALVTRLV-KGTG---KTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSD 897 (1191)
Q Consensus 843 ~sP~--qK~~iV~~l-~~~g---~~vl~iGDG~ND~~ml~~AdvGI~i~g~e~~~a~~~aD 897 (1191)
..|. .|...++.+ ++.| ..++++||+.||.+|++.|+.||+|.+... ..+..||
T Consensus 153 i~~~~~~K~~al~~l~~~~g~~~~~~i~~GD~~nD~~ml~~~~~~iav~na~~-~~k~~a~ 212 (236)
T TIGR02471 153 VLPLRASKGLALRYLSYRWGLPLEQILVAGDSGNDEEMLRGLTLGVVVGNHDP-ELEGLRH 212 (236)
T ss_pred EeeCCCChHHHHHHHHHHhCCCHHHEEEEcCCccHHHHHcCCCcEEEEcCCcH-HHHHhhc
Confidence 4454 899999998 6555 358999999999999999999999965443 3778888
No 65
>TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal. This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog.
Probab=97.90 E-value=4.8e-05 Score=81.01 Aligned_cols=117 Identities=20% Similarity=0.229 Sum_probs=78.4
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEeCCCHhhHHHHHHHcCccccCceEEEEecCCchhhhhhhhcchHHHHHHHHHHHHHH
Q 001008 710 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQ 789 (1191)
Q Consensus 710 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 (1191)
++.+++.++++.|++.|+++.++||-....+..+++.+|+..--...+..+...
T Consensus 80 ~~~~g~~e~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~g~~~~~~~~~~~~~~g-------------------------- 133 (201)
T TIGR01491 80 SLRDYAEELVRWLKEKGLKTAIVSGGIMCLAKKVAEKLNPDYVYSNELVFDEKG-------------------------- 133 (201)
T ss_pred CCCccHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHhCCCeEEEEEEEEcCCC--------------------------
Confidence 589999999999999999999999999999999999999632100111110000
Q ss_pred HHhhcccccccccccceeEEEEeCchhhHHhHHHHHHHHHHHHhhcCceEEEcCChhhHHHHHHHh-hcCC---CEEEEE
Q 001008 790 IREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLV-KGTG---KTTLAI 865 (1191)
Q Consensus 790 ~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~l~~~~~~~v~~r~sP~qK~~iV~~l-~~~g---~~vl~i 865 (1191)
...+ ..+-...|..|..+++.+ +..| ..++++
T Consensus 134 --------------------~~~p------------------------~~~~~~~~~~k~~~~~~~~~~~~~~~~~~i~i 169 (201)
T TIGR01491 134 --------------------FIQP------------------------DGIVRVTFDNKGEAVERLKRELNPSLTETVAV 169 (201)
T ss_pred --------------------eEec------------------------ceeeEEccccHHHHHHHHHHHhCCCHHHEEEE
Confidence 0000 011123355677666666 4333 469999
Q ss_pred cCCccChHhhhhcceeEEeccCccchhhhccc
Q 001008 866 GDGANDVGMLQEADIGVGISGVEGMQAVMSSD 897 (1191)
Q Consensus 866 GDG~ND~~ml~~AdvGI~i~g~e~~~a~~~aD 897 (1191)
||+.||++|++.|++++++.+... ....++|
T Consensus 170 GDs~~D~~~a~~ag~~~a~~~~~~-~~~~a~~ 200 (201)
T TIGR01491 170 GDSKNDLPMFEVADISISLGDEGH-ADYLAKD 200 (201)
T ss_pred cCCHhHHHHHHhcCCeEEECCCcc-chhhccc
Confidence 999999999999999999844332 2444444
No 66
>PRK08238 hypothetical protein; Validated
Probab=97.88 E-value=0.0026 Score=76.13 Aligned_cols=40 Identities=18% Similarity=0.141 Sum_probs=38.0
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEeCCCHhhHHHHHHHcCc
Q 001008 710 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSL 749 (1191)
Q Consensus 710 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gl 749 (1191)
|+++++.+.+++++++|++++++||-....+..+++..|+
T Consensus 72 p~~pga~e~L~~lk~~G~~v~LaTas~~~~a~~i~~~lGl 111 (479)
T PRK08238 72 PYNEEVLDYLRAERAAGRKLVLATASDERLAQAVAAHLGL 111 (479)
T ss_pred CCChhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCC
Confidence 4789999999999999999999999999999999999997
No 67
>TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase. Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles.
Probab=97.84 E-value=3.5e-05 Score=83.36 Aligned_cols=43 Identities=7% Similarity=0.037 Sum_probs=38.0
Q ss_pred cccccCCcHHHHHHHHHcCCeEEEEeCCCHhhHHHHHHHcCcc
Q 001008 708 EDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLL 750 (1191)
Q Consensus 708 eD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gl~ 750 (1191)
.+..-+++.++|++|+++|++++++||+....+..+.+++|+.
T Consensus 13 ~~~~~~~~~~ai~~l~~~G~~~vi~TgR~~~~~~~~~~~lg~~ 55 (225)
T TIGR02461 13 PGYEPGPAREALEELKDLGFPIVFVSSKTRAEQEYYREELGVE 55 (225)
T ss_pred CCCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCC
Confidence 3455567999999999999999999999999999999999963
No 68
>PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=97.80 E-value=9.2e-05 Score=82.98 Aligned_cols=50 Identities=18% Similarity=0.098 Sum_probs=41.3
Q ss_pred cceEEEeeeecccccCCcHHHHHHHHHcCCeEEEEeCCCHhhHHHHHHHcCcc
Q 001008 698 DLILLGATAVEDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLL 750 (1191)
Q Consensus 698 dl~llG~~~ieD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gl~ 750 (1191)
|.||+.- ...+-+++.++|+.|++.|++++++||+....+..+++++|+.
T Consensus 12 DGTLl~~---~~~~~~~~~~ai~~l~~~Gi~~~iaTgR~~~~~~~~~~~l~l~ 61 (273)
T PRK00192 12 DGTLLDH---HTYSYEPAKPALKALKEKGIPVIPCTSKTAAEVEVLRKELGLE 61 (273)
T ss_pred cccCcCC---CCcCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCC
Confidence 4555531 2345677999999999999999999999999999999999974
No 69
>TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein. This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate.
Probab=97.77 E-value=0.00014 Score=78.71 Aligned_cols=36 Identities=22% Similarity=0.248 Sum_probs=34.1
Q ss_pred cHHHHHHHHHcCCeEEEEeCCCHhhHHHHHHHcCcc
Q 001008 715 VPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLL 750 (1191)
Q Consensus 715 v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gl~ 750 (1191)
+.++|+.|+++||+++++||+....+..+.+.+|+.
T Consensus 21 ~~~~l~~l~~~gi~~~i~TgR~~~~~~~~~~~l~~~ 56 (221)
T TIGR02463 21 AAPWLTRLQEAGIPVILCTSKTAAEVEYLQKALGLT 56 (221)
T ss_pred HHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCC
Confidence 789999999999999999999999999999999973
No 70
>PRK10187 trehalose-6-phosphate phosphatase; Provisional
Probab=97.75 E-value=0.00037 Score=77.42 Aligned_cols=182 Identities=9% Similarity=0.111 Sum_probs=93.8
Q ss_pred cccCCcHHHHHHHHH-cCCeEEEEeCCCHhhHHHHHHHcCc--cccCceEEEEecCCchhhhhhhhcchHHHHHHHHHHH
Q 001008 710 KLQKGVPECIDKLAQ-AGIKVWVLTGDKMETAINIGYACSL--LRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESV 786 (1191)
Q Consensus 710 ~lr~~v~~~I~~L~~-aGIkv~mlTGD~~~ta~~ia~~~gl--~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 786 (1191)
.+-+++.++|+.|++ .|++++++||+....+..+....++ +..+...+. +.... . ... .+.......+
T Consensus 36 ~i~~~~~~~L~~L~~~~g~~v~i~SGR~~~~~~~~~~~~~~~~i~~nGa~i~-~~~~~-~--~~~-----~l~~~~~~~i 106 (266)
T PRK10187 36 VVPDNILQGLQLLATANDGALALISGRSMVELDALAKPYRFPLAGVHGAERR-DINGK-T--HIV-----HLPDAIARDI 106 (266)
T ss_pred cCCHHHHHHHHHHHhCCCCcEEEEeCCCHHHHHHhcCcccceEEEeCCCeee-cCCCC-e--eec-----cCChhHHHHH
Confidence 345788999999998 7999999999999999888776653 222222111 11110 0 000 0001111111
Q ss_pred HHHHHhhcccccccccccceeEEEEeCchhhHHhHHHHHHHHHHHHhhcCce------EEEcCCh--hhHHHHHHHh-hc
Q 001008 787 TKQIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASV------ICCRSSP--KQKALVTRLV-KG 857 (1191)
Q Consensus 787 ~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~l~~~~~~~------v~~r~sP--~qK~~iV~~l-~~ 857 (1191)
...+...........-.....+++........ ..+.+.+....+....... -+..+.| .+|+..++.+ +.
T Consensus 107 ~~~l~~~~~~~pg~~ve~k~~~~~~h~r~~~~-~~~~~~~l~~~i~~~~~~~~~~~g~~~lEi~p~g~~Kg~al~~ll~~ 185 (266)
T PRK10187 107 SVQLHTALAQLPGAELEAKGMAFALHYRQAPQ-HEDALLALAQRITQIWPQLALQPGKCVVEIKPRGTNKGEAIAAFMQE 185 (266)
T ss_pred HHHHHHHhccCCCcEEEeCCcEEEEECCCCCc-cHHHHHHHHHHHHhhCCceEEeCCCEEEEeeCCCCCHHHHHHHHHHh
Confidence 11111100000000001122223333322210 0111222222222222211 2223344 4899999888 65
Q ss_pred CC---CEEEEEcCCccChHhhhhc----ceeEEeccCccchhhhccceeccchhhh
Q 001008 858 TG---KTTLAIGDGANDVGMLQEA----DIGVGISGVEGMQAVMSSDYAIAQFRFL 906 (1191)
Q Consensus 858 ~g---~~vl~iGDG~ND~~ml~~A----dvGI~i~g~e~~~a~~~aD~vl~~f~~l 906 (1191)
.| ..++++||+.||.+|++.+ +.||+|.. +...|++.+.+-..+
T Consensus 186 ~~~~~~~v~~~GD~~nD~~mf~~~~~~~g~~vavg~-----a~~~A~~~l~~~~~v 236 (266)
T PRK10187 186 APFAGRTPVFVGDDLTDEAGFAVVNRLGGISVKVGT-----GATQASWRLAGVPDV 236 (266)
T ss_pred cCCCCCeEEEEcCCccHHHHHHHHHhcCCeEEEECC-----CCCcCeEeCCCHHHH
Confidence 54 5799999999999999999 89999843 235688888875443
No 71
>PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional
Probab=97.75 E-value=0.00023 Score=86.22 Aligned_cols=39 Identities=5% Similarity=-0.019 Sum_probs=35.1
Q ss_pred ccCCcHHHHHHHHHcCCeEEEEeCCCHhhHHHHHHHcCc
Q 001008 711 LQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSL 749 (1191)
Q Consensus 711 lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gl 749 (1191)
.-+.+.++|+.|+++||+++++||+....+..+++++|+
T Consensus 434 i~~~t~eAL~~L~ekGI~~VIATGRs~~~i~~l~~~Lgl 472 (694)
T PRK14502 434 SYSTALDALRLLKDKELPLVFCSAKTMGEQDLYRNELGI 472 (694)
T ss_pred cCHHHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCC
Confidence 334678999999999999999999999999999999985
No 72
>PLN02954 phosphoserine phosphatase
Probab=97.74 E-value=0.00015 Score=78.81 Aligned_cols=41 Identities=22% Similarity=0.444 Sum_probs=38.5
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEeCCCHhhHHHHHHHcCcc
Q 001008 710 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLL 750 (1191)
Q Consensus 710 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gl~ 750 (1191)
++.||+.++++.|++.|+++.++||.....+..++..+|+.
T Consensus 84 ~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~~l~~~gi~ 124 (224)
T PLN02954 84 RLSPGIPELVKKLRARGTDVYLVSGGFRQMIAPVAAILGIP 124 (224)
T ss_pred CCCccHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHhCCC
Confidence 47899999999999999999999999999999999999984
No 73
>TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase. Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX.
Probab=97.73 E-value=0.00014 Score=78.29 Aligned_cols=138 Identities=12% Similarity=0.142 Sum_probs=84.5
Q ss_pred ccccCCcHHHHHHHHHcCCeEEEEeCCCHhhHHHHHHHcCccccCceEEEEecCCchhhhhhhhcchHHHHHHHHHHHHH
Q 001008 709 DKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTK 788 (1191)
Q Consensus 709 D~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 788 (1191)
-+++||+.+.++.|++.|+++.++||.....+..+....+... .++..+
T Consensus 69 ~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~~~~~---~i~~n~---------------------------- 117 (214)
T TIGR03333 69 AEIREGFREFVAFINEHGIPFYVISGGMDFFVYPLLEGIVEKD---RIYCNE---------------------------- 117 (214)
T ss_pred CcccccHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHhhCCcc---cEEece----------------------------
Confidence 4789999999999999999999999999888888887764321 111000
Q ss_pred HHHhhcccccccccccceeEEEEeCchhhHHhHHHHHHHHHHHHhhcCceE-EEcCChhhHHHHHHHhhcCCCEEEEEcC
Q 001008 789 QIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVI-CCRSSPKQKALVTRLVKGTGKTTLAIGD 867 (1191)
Q Consensus 789 ~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~l~~~~~~~v-~~r~sP~qK~~iV~~l~~~g~~vl~iGD 867 (1191)
+.++|..+.... ++ .... +.......|..+++.++.....+++|||
T Consensus 118 --------------------~~~~~~~~~~~~-p~------------~~~~~~~~~cg~~K~~~l~~~~~~~~~~i~iGD 164 (214)
T TIGR03333 118 --------------------ADFSNEYIHIDW-PH------------PCDGTCQNQCGCCKPSLIRKLSEPNDYHIVIGD 164 (214)
T ss_pred --------------------eEeeCCeeEEeC-CC------------CCccccccCCCCCHHHHHHHHhhcCCcEEEEeC
Confidence 011111110000 00 0000 0011134789999988656677899999
Q ss_pred CccChHhhhhcceeEEeccC-ccchhhhccceeccchhhhhHhh
Q 001008 868 GANDVGMLQEADIGVGISGV-EGMQAVMSSDYAIAQFRFLERLL 910 (1191)
Q Consensus 868 G~ND~~ml~~AdvGI~i~g~-e~~~a~~~aD~vl~~f~~l~~ll 910 (1191)
|.||..|.+.||++++-..- +-.+-...+.+...+|..+...|
T Consensus 165 g~~D~~~a~~Ad~~~ar~~l~~~~~~~~~~~~~~~~f~di~~~l 208 (214)
T TIGR03333 165 SVTDVEAAKQSDLCFARDYLLNECEELGLNHAPFQDFYDVRKEL 208 (214)
T ss_pred CHHHHHHHHhCCeeEehHHHHHHHHHcCCCccCcCCHHHHHHHH
Confidence 99999999999997764211 11111223445556676666654
No 74
>PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=97.62 E-value=0.00046 Score=75.33 Aligned_cols=41 Identities=7% Similarity=0.006 Sum_probs=37.0
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEeCCCHhhHHHHHHHcCcc
Q 001008 710 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLL 750 (1191)
Q Consensus 710 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gl~ 750 (1191)
..-+.+.++|++|+++||.++++||........+.+++++-
T Consensus 18 ~~~~~a~~aL~~Lk~~GI~vVlaTGRt~~ev~~l~~~Lgl~ 58 (302)
T PRK12702 18 NSYGAARQALAALERRSIPLVLYSLRTRAQLEHLCRQLRLE 58 (302)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHhCCC
Confidence 45566899999999999999999999999999999999973
No 75
>TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB. The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear.
Probab=97.61 E-value=0.00028 Score=75.38 Aligned_cols=48 Identities=23% Similarity=0.351 Sum_probs=38.3
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEeCCCHhhHHHHHHHcC--ccccCceEE
Q 001008 710 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACS--LLRQEMKQI 757 (1191)
Q Consensus 710 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~g--l~~~~~~~~ 757 (1191)
++.+.+.++|++|++.|++++++||+....+..+..+.+ ++..+...+
T Consensus 17 ~~~~~~~~~l~~l~~~g~~~~i~TGR~~~~~~~~~~~~~~~~i~~nGa~i 66 (204)
T TIGR01484 17 ELSPETIEALERLREAGVKVVLVTGRSLAEIKELLKQLPLPLIAENGALI 66 (204)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHhCCCCEEECCCcEE
Confidence 466889999999999999999999999999998887633 444444433
No 76
>TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490. A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog.
Probab=97.57 E-value=0.00026 Score=75.45 Aligned_cols=111 Identities=12% Similarity=0.047 Sum_probs=76.9
Q ss_pred cccccCCcHHHHHHHHHcCCeEEEEeCCCHhhHHHHHHHcCccccCceEEEEecCCchhhhhhhhcchHHHHHHHHHHHH
Q 001008 708 EDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVT 787 (1191)
Q Consensus 708 eD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 787 (1191)
..++.+++.+.|+.+++.|++++++||-....+..+++.+|+..--...+....+.
T Consensus 85 ~~~~~~~~~~~l~~l~~~g~~v~ivS~s~~~~v~~~~~~lg~~~~~~~~l~~~~~g------------------------ 140 (202)
T TIGR01490 85 ESILYPEARDLIRWHKAEGHTIVLVSASLTILVKPLARILGIDNAIGTRLEESEDG------------------------ 140 (202)
T ss_pred HHhccHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCCcceEecceEEcCCC------------------------
Confidence 45789999999999999999999999999999999999999832100000000000
Q ss_pred HHHHhhcccccccccccceeEEEEeCchhhHHhHHHHHHHHHHHHhhcCceEEEcCChhhHHHHHHHh-hcCC---CEEE
Q 001008 788 KQIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLV-KGTG---KTTL 863 (1191)
Q Consensus 788 ~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~l~~~~~~~v~~r~sP~qK~~iV~~l-~~~g---~~vl 863 (1191)
..+|+... -.+.++.|...++.+ +..+ ..++
T Consensus 141 ----------------------~~~g~~~~-----------------------~~~~g~~K~~~l~~~~~~~~~~~~~~~ 175 (202)
T TIGR01490 141 ----------------------IYTGNIDG-----------------------NNCKGEGKVHALAELLAEEQIDLKDSY 175 (202)
T ss_pred ----------------------EEeCCccC-----------------------CCCCChHHHHHHHHHHHHcCCCHHHcE
Confidence 11221110 023356777777666 4444 3689
Q ss_pred EEcCCccChHhhhhcceeEEeccC
Q 001008 864 AIGDGANDVGMLQEADIGVGISGV 887 (1191)
Q Consensus 864 ~iGDG~ND~~ml~~AdvGI~i~g~ 887 (1191)
++||+.+|.+|++.|+.++.+...
T Consensus 176 ~~gDs~~D~~~~~~a~~~~~v~~~ 199 (202)
T TIGR01490 176 AYGDSISDLPLLSLVGHPYVVNPD 199 (202)
T ss_pred eeeCCcccHHHHHhCCCcEEeCCC
Confidence 999999999999999999988543
No 77
>PLN02382 probable sucrose-phosphatase
Probab=97.51 E-value=0.00056 Score=80.68 Aligned_cols=176 Identities=16% Similarity=0.165 Sum_probs=88.9
Q ss_pred HHHH-HHHHHcCCeEEEEeCCCHhhHHHHHHHcCccccCceEEEEecCCchh-hhhh-hhcchHHHHHHHHHH-HHHHHH
Q 001008 716 PECI-DKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDM-EALE-KQGDKENITKVSLES-VTKQIR 791 (1191)
Q Consensus 716 ~~~I-~~L~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~-~~~~-~~~~~~~~~~~~~~~-~~~~~~ 791 (1191)
.+++ +++++.|+..+++||+....+..+.++.++..++.-+ .-++..... ..+. +..-...+....... +...+.
T Consensus 34 ~~~l~~~~~~~gi~fv~aTGR~~~~~~~l~~~~~l~~p~~~I-~~nGt~I~~~~~~~~d~~w~~~l~~~w~~~~v~~~~~ 112 (413)
T PLN02382 34 FNALWEAEYRHDSLLVFSTGRSPTLYKELRKEKPLLTPDITI-MSVGTEIAYGESMVPDHGWVEYLNKKWDREIVVEETS 112 (413)
T ss_pred HHHHHHHhhcCCeeEEEEcCCCHHHHHHHHHhCCCCCCCEEE-EcCCcEEEeCCCCccChhHHHHHhccCChhhHHHHHh
Confidence 3444 8889999999999999999999999999987765211 111111000 0000 000011111111111 111111
Q ss_pred hhccccc--ccc-cccceeEEEEeCchhhHHhHHHHHHHHHHHHhhcCce----EEEcCChh--hHHHHHHHh-hcC---
Q 001008 792 EGISQVN--SAK-ESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASV----ICCRSSPK--QKALVTRLV-KGT--- 858 (1191)
Q Consensus 792 ~~~~~~~--~~~-~~~~~~~lvi~G~~l~~~~~~~~~~~~~~l~~~~~~~----v~~r~sP~--qK~~iV~~l-~~~--- 858 (1191)
. ...+. ... ....+..+..+.+.... ..+++.+.+......++.+ -+..+.|. .|+..++.+ +..
T Consensus 113 ~-~~~l~~q~~~~~~~~Ki~~~~~~~~~~~-~~~~l~~~~~~~g~~~~i~~s~~~~ldI~p~g~sKg~Al~~L~~~~~~~ 190 (413)
T PLN02382 113 K-FPELKLQPETEQRPHKVSFYVDKKKAQE-VIKELSERLEKRGLDVKIIYSGGIDLDVLPQGAGKGQALAYLLKKLKAE 190 (413)
T ss_pred c-CCCcccCCcccCCCeEEEEEechHHhHH-HHHHHHHHHHhcCCcEEEEEECCcEEEEEeCCCCHHHHHHHHHHHhhhc
Confidence 1 10111 111 11122233333222221 1223333333211111111 13345554 699999999 554
Q ss_pred C---CEEEEEcCCccChHhhhhcc-eeEEeccCccchhhhc
Q 001008 859 G---KTTLAIGDGANDVGMLQEAD-IGVGISGVEGMQAVMS 895 (1191)
Q Consensus 859 g---~~vl~iGDG~ND~~ml~~Ad-vGI~i~g~e~~~a~~~ 895 (1191)
| ..|+++||+.||.+||+.|+ .||+|.+.... .+..
T Consensus 191 gi~~~~~iafGDs~NDleMl~~ag~~gvam~NA~~e-lk~~ 230 (413)
T PLN02382 191 GKAPVNTLVCGDSGNDAELFSVPDVYGVMVSNAQEE-LLQW 230 (413)
T ss_pred CCChhcEEEEeCCHHHHHHHhcCCCCEEEEcCCcHH-HHHH
Confidence 3 47999999999999999999 69999654432 4443
No 78
>cd01427 HAD_like Haloacid dehalogenase-like hydrolases. The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.
Probab=97.47 E-value=0.00031 Score=69.14 Aligned_cols=44 Identities=25% Similarity=0.279 Sum_probs=40.3
Q ss_pred ecccccCCcHHHHHHHHHcCCeEEEEeCCCHhhHHHHHHHcCcc
Q 001008 707 VEDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLL 750 (1191)
Q Consensus 707 ieD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gl~ 750 (1191)
-..++.+++.+.++.|++.|++++++||.....+......+|+.
T Consensus 21 ~~~~~~~~~~~~l~~l~~~g~~i~ivS~~~~~~~~~~~~~~~~~ 64 (139)
T cd01427 21 EELELYPGVKEALKELKEKGIKLALATNKSRREVLELLEELGLD 64 (139)
T ss_pred ccCCcCcCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHHHcCCc
Confidence 34588999999999999999999999999999999999998874
No 79
>TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like. Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences.
Probab=97.46 E-value=0.00034 Score=72.83 Aligned_cols=40 Identities=20% Similarity=0.189 Sum_probs=37.5
Q ss_pred ccCCcHHHHHHHHHcCCeEEEEeCCCHhhHHHHHHHcCcc
Q 001008 711 LQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLL 750 (1191)
Q Consensus 711 lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gl~ 750 (1191)
+++++.+.++.+++.|++++++||.....+..++...|+.
T Consensus 74 ~~~g~~~~l~~l~~~g~~~~ivS~~~~~~i~~~~~~~g~~ 113 (177)
T TIGR01488 74 LRPGARELISWLKERGIDTVIVSGGFDFFVEPVAEKLGID 113 (177)
T ss_pred cCcCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCc
Confidence 5799999999999999999999999999999999999874
No 80
>PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed
Probab=97.45 E-value=0.00049 Score=74.39 Aligned_cols=38 Identities=13% Similarity=0.210 Sum_probs=35.6
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEeCCCHhhHHHHHHHc
Q 001008 710 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYAC 747 (1191)
Q Consensus 710 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~ 747 (1191)
+++||+.++++.|++.|+++.++||-....+..+.+..
T Consensus 74 ~l~pG~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~ 111 (219)
T PRK09552 74 EIREGFHEFVQFVKENNIPFYVVSGGMDFFVYPLLQGL 111 (219)
T ss_pred CcCcCHHHHHHHHHHcCCeEEEECCCcHHHHHHHHHHh
Confidence 68999999999999999999999999998888888887
No 81
>COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only]
Probab=97.44 E-value=0.00033 Score=67.73 Aligned_cols=96 Identities=18% Similarity=0.275 Sum_probs=71.7
Q ss_pred HHHHHHHHcCCeEEEEeCCCHhhHHHHHHHcCccccCceEEEEecCCchhhhhhhhcchHHHHHHHHHHHHHHHHhhccc
Q 001008 717 ECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQIREGISQ 796 (1191)
Q Consensus 717 ~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 (1191)
..|+.|.++||++-++||++...+..=|+++|+-.
T Consensus 42 ~Gik~l~~~Gi~vAIITGr~s~ive~Ra~~LGI~~--------------------------------------------- 76 (170)
T COG1778 42 HGIKLLLKSGIKVAIITGRDSPIVEKRAKDLGIKH--------------------------------------------- 76 (170)
T ss_pred HHHHHHHHcCCeEEEEeCCCCHHHHHHHHHcCCce---------------------------------------------
Confidence 47999999999999999999999999999999820
Q ss_pred ccccccccceeEEEEeCchhhHHhHHHHHHHHHHHHhhcCceEEEcCChhhHHHHHHHh-hcCC---CEEEEEcCCccCh
Q 001008 797 VNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLV-KGTG---KTTLAIGDGANDV 872 (1191)
Q Consensus 797 ~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~l~~~~~~~v~~r~sP~qK~~iV~~l-~~~g---~~vl~iGDG~ND~ 872 (1191)
+..| -.+|....+.+ ++.+ ..|+.+||-.||.
T Consensus 77 -------------~~qG-------------------------------~~dK~~a~~~L~~~~~l~~e~~ayiGDD~~Dl 112 (170)
T COG1778 77 -------------LYQG-------------------------------ISDKLAAFEELLKKLNLDPEEVAYVGDDLVDL 112 (170)
T ss_pred -------------eeec-------------------------------hHhHHHHHHHHHHHhCCCHHHhhhhcCccccH
Confidence 0111 12444444444 3333 4689999999999
Q ss_pred HhhhhcceeEEeccCccchhhhccceeccc
Q 001008 873 GMLQEADIGVGISGVEGMQAVMSSDYAIAQ 902 (1191)
Q Consensus 873 ~ml~~AdvGI~i~g~e~~~a~~~aD~vl~~ 902 (1191)
|+|...+++++....... .++.||+++..
T Consensus 113 pvm~~vGls~a~~dAh~~-v~~~a~~Vt~~ 141 (170)
T COG1778 113 PVMEKVGLSVAVADAHPL-LKQRADYVTSK 141 (170)
T ss_pred HHHHHcCCcccccccCHH-HHHhhHhhhhc
Confidence 999999999998554432 67789998763
No 82
>TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact.
Probab=97.38 E-value=0.00059 Score=71.71 Aligned_cols=42 Identities=14% Similarity=0.075 Sum_probs=38.5
Q ss_pred ccccCCcHHHHHHHHHcCCeEEEEeCCCHhhHHHHHHHcCcc
Q 001008 709 DKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLL 750 (1191)
Q Consensus 709 D~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gl~ 750 (1191)
-++.+++.+.++.|++.|+++.++|+.....+..+....|+.
T Consensus 71 ~~l~~g~~~ll~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~ 112 (188)
T TIGR01489 71 APIDPGFKEFIAFIKEHGIDFIVISDGNDFFIDPVLEGIGEK 112 (188)
T ss_pred CCCCccHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHHcCCh
Confidence 478999999999999999999999999999999988888874
No 83
>PTZ00174 phosphomannomutase; Provisional
Probab=97.36 E-value=0.00076 Score=74.33 Aligned_cols=44 Identities=25% Similarity=0.349 Sum_probs=35.2
Q ss_pred hhHHHHHHHhhcCCCEEEEEcC----CccChHhhhhc-ceeEEeccCcc
Q 001008 846 KQKALVTRLVKGTGKTTLAIGD----GANDVGMLQEA-DIGVGISGVEG 889 (1191)
Q Consensus 846 ~qK~~iV~~l~~~g~~vl~iGD----G~ND~~ml~~A-dvGI~i~g~e~ 889 (1191)
-+|+.-++.+......|+++|| |.||.+||+.| -.|+++.+.+.
T Consensus 187 vsKg~al~~L~~~~~eviafGD~~~~~~NDieMl~~~~~~g~~v~n~~~ 235 (247)
T PTZ00174 187 WDKTYCLRHLENDFKEIHFFGDKTFEGGNDYEIYNDPRTIGHSVKNPED 235 (247)
T ss_pred CcHHHHHHHHHhhhhhEEEEcccCCCCCCcHhhhhcCCCceEEeCCHHH
Confidence 4899999999333578999999 99999999976 57777765544
No 84
>PRK13222 phosphoglycolate phosphatase; Provisional
Probab=97.28 E-value=0.0013 Score=71.38 Aligned_cols=42 Identities=24% Similarity=0.244 Sum_probs=38.4
Q ss_pred ccccCCcHHHHHHHHHcCCeEEEEeCCCHhhHHHHHHHcCcc
Q 001008 709 DKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLL 750 (1191)
Q Consensus 709 D~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gl~ 750 (1191)
-++.||+.+.++.|++.|+++.++||.....+..+.+..|+.
T Consensus 92 ~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~ 133 (226)
T PRK13222 92 SRLYPGVKETLAALKAAGYPLAVVTNKPTPFVAPLLEALGIA 133 (226)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCc
Confidence 468899999999999999999999999999998898888873
No 85
>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional
Probab=97.27 E-value=0.0035 Score=80.22 Aligned_cols=186 Identities=16% Similarity=0.125 Sum_probs=94.9
Q ss_pred ccCCcHHHHHHHHH-cCCeEEEEeCCCHhhHHHHHHHcC--ccccCceEEEEecCCchhhhhhhhcchHHHHHHHHHHHH
Q 001008 711 LQKGVPECIDKLAQ-AGIKVWVLTGDKMETAINIGYACS--LLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVT 787 (1191)
Q Consensus 711 lr~~v~~~I~~L~~-aGIkv~mlTGD~~~ta~~ia~~~g--l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 787 (1191)
+-+++.++|+.|.+ .|+.|+++||+............+ ++..+...+...+.. +..... ......+.+.
T Consensus 515 ~~~~~~~~L~~L~~d~g~~V~ivSGR~~~~l~~~~~~~~l~liaenG~~i~~~~~~-----w~~~~~---~~~~w~~~v~ 586 (726)
T PRK14501 515 PDKELRDLLRRLAADPNTDVAIISGRDRDTLERWFGDLPIHLVAEHGAWSRAPGGE-----WQLLEP---VATEWKDAVR 586 (726)
T ss_pred CCHHHHHHHHHHHcCCCCeEEEEeCCCHHHHHHHhCCCCeEEEEeCCEEEeCCCCc-----eEECCC---cchhHHHHHH
Confidence 55788899999998 699999999999988877655444 344443333211111 000000 0000011111
Q ss_pred HHHHhhcccccccccccceeEEEEeCch----hhHHhHHHHHHHHHHHHhhcCceEE-----EcCCh--hhHHHHHHHh-
Q 001008 788 KQIREGISQVNSAKESKVTFGLVIDGKS----LDFALDKKLEKMFLDLAIDCASVIC-----CRSSP--KQKALVTRLV- 855 (1191)
Q Consensus 788 ~~~~~~~~~~~~~~~~~~~~~lvi~G~~----l~~~~~~~~~~~~~~l~~~~~~~v~-----~r~sP--~qK~~iV~~l- 855 (1191)
.-+..................++..-.. +.....+++.+.+..+.......+. ..+.| .+|+..++.+
T Consensus 587 ~il~~~~~~~~gs~ie~k~~~l~~~~r~~d~~~~~~~a~~l~~~l~~~~~~~~~~v~~g~~~veV~p~~vnKG~al~~ll 666 (726)
T PRK14501 587 PILEEFVDRTPGSFIEEKEASLAWHYRNADPELGEARANELILALSSLLSNAPLEVLRGNKVVEVRPAGVNKGRAVRRLL 666 (726)
T ss_pred HHHHHHHhcCCCcEEEEcceEEEEEccCCCHHHHHHHHHHHHHHHHHHhcCCCeEEEECCeEEEEEECCCCHHHHHHHHH
Confidence 1111100000011111112333332111 1111122344444433222221121 23334 4899999999
Q ss_pred hcC-CCEEEEEcCCccChHhhhhc---ceeEEeccCccchhhhccceeccchhhhhHh
Q 001008 856 KGT-GKTTLAIGDGANDVGMLQEA---DIGVGISGVEGMQAVMSSDYAIAQFRFLERL 909 (1191)
Q Consensus 856 ~~~-g~~vl~iGDG~ND~~ml~~A---dvGI~i~g~e~~~a~~~aD~vl~~f~~l~~l 909 (1191)
+.. -..++++||+.||.+|++.+ ..+|++.. +..+|++.+.+-..+..+
T Consensus 667 ~~~~~d~vl~~GD~~nDe~Mf~~~~~~~~~v~vG~-----~~s~A~~~l~~~~eV~~~ 719 (726)
T PRK14501 667 EAGPYDFVLAIGDDTTDEDMFRALPETAITVKVGP-----GESRARYRLPSQREVREL 719 (726)
T ss_pred hcCCCCEEEEECCCCChHHHHHhcccCceEEEECC-----CCCcceEeCCCHHHHHHH
Confidence 432 25799999999999999997 46777633 346789999875544333
No 86
>TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein. The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity.
Probab=97.15 E-value=0.0018 Score=69.23 Aligned_cols=41 Identities=29% Similarity=0.362 Sum_probs=37.1
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEeCCCHhhHHHHHHHcCcc
Q 001008 710 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLL 750 (1191)
Q Consensus 710 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gl~ 750 (1191)
++.+|+.++++.|++.|+++.++||.....+..+....|+.
T Consensus 75 ~~~~g~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~~l~ 115 (205)
T TIGR01454 75 EVFPGVPELLAELRADGVGTAIATGKSGPRARSLLEALGLL 115 (205)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHcCCh
Confidence 67899999999999999999999999888888888888873
No 87
>TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702).
Probab=97.04 E-value=0.0025 Score=68.56 Aligned_cols=41 Identities=17% Similarity=0.182 Sum_probs=37.7
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEeCCCHhhHHHHHHHcCcc
Q 001008 710 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLL 750 (1191)
Q Consensus 710 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gl~ 750 (1191)
++.+|+.++++.|++.|+++.++|+.....+..+.+..|+.
T Consensus 85 ~~~~g~~~~L~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~ 125 (213)
T TIGR01449 85 SVFPGVEATLGALRAKGLRLGLVTNKPTPLARPLLELLGLA 125 (213)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCcH
Confidence 57899999999999999999999999988888888888874
No 88
>COG0546 Gph Predicted phosphatases [General function prediction only]
Probab=96.87 E-value=0.0054 Score=66.32 Aligned_cols=126 Identities=23% Similarity=0.212 Sum_probs=84.3
Q ss_pred cccccCCcHHHHHHHHHcCCeEEEEeCCCHhhHHHHHHHcCccccCceEEEEecCCchhhhhhhhcchHHHHHHHHHHHH
Q 001008 708 EDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVT 787 (1191)
Q Consensus 708 eD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 787 (1191)
+..+-+|+++++..|+++|++..++|++....+..+.+..|+..--..++.
T Consensus 87 ~~~~~~gv~e~L~~L~~~g~~l~i~T~k~~~~~~~~l~~~gl~~~F~~i~g----------------------------- 137 (220)
T COG0546 87 ESRLFPGVKELLAALKSAGYKLGIVTNKPERELDILLKALGLADYFDVIVG----------------------------- 137 (220)
T ss_pred cCccCCCHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHhCCccccceEEc-----------------------------
Confidence 557889999999999999999999999999999999999998432111111
Q ss_pred HHHHhhcccccccccccceeEEEEeCchhhHHhHHHHHHHHHHHHhhcCceEEEcCChhhHHHHHHHhhcCCCEEEEEcC
Q 001008 788 KQIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLVKGTGKTTLAIGD 867 (1191)
Q Consensus 788 ~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~l~~~~~~~v~~r~sP~qK~~iV~~l~~~g~~vl~iGD 867 (1191)
+... -...-.|.....+.+.+......++||||
T Consensus 138 -------------------------~~~~----------------------~~~KP~P~~l~~~~~~~~~~~~~~l~VGD 170 (220)
T COG0546 138 -------------------------GDDV----------------------PPPKPDPEPLLLLLEKLGLDPEEALMVGD 170 (220)
T ss_pred -------------------------CCCC----------------------CCCCcCHHHHHHHHHHhCCChhheEEECC
Confidence 0000 00011233334444444222347999999
Q ss_pred CccChHhhhhccee-EEe-ccC--ccchhhhccceeccchhhhhHh
Q 001008 868 GANDVGMLQEADIG-VGI-SGV--EGMQAVMSSDYAIAQFRFLERL 909 (1191)
Q Consensus 868 G~ND~~ml~~AdvG-I~i-~g~--e~~~a~~~aD~vl~~f~~l~~l 909 (1191)
..+|+.|=+.|++. |++ .|. ...-....+|+++.+...|...
T Consensus 171 s~~Di~aA~~Ag~~~v~v~~g~~~~~~l~~~~~d~vi~~~~el~~~ 216 (220)
T COG0546 171 SLNDILAAKAAGVPAVGVTWGYNSREELAQAGADVVIDSLAELLAL 216 (220)
T ss_pred CHHHHHHHHHcCCCEEEEECCCCCCcchhhcCCCEEECCHHHHHHH
Confidence 99999999999944 333 222 1222456699999987776655
No 89
>PRK13223 phosphoglycolate phosphatase; Provisional
Probab=96.85 E-value=0.0046 Score=69.08 Aligned_cols=41 Identities=12% Similarity=0.182 Sum_probs=36.5
Q ss_pred ccccCCcHHHHHHHHHcCCeEEEEeCCCHhhHHHHHHHcCc
Q 001008 709 DKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSL 749 (1191)
Q Consensus 709 D~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gl 749 (1191)
.++.+++.++++.|++.|+++.++||.+...+..+....|+
T Consensus 100 ~~~~~g~~e~L~~Lk~~g~~l~ivTn~~~~~~~~~l~~~~i 140 (272)
T PRK13223 100 TVVYPGVRDTLKWLKKQGVEMALITNKPERFVAPLLDQMKI 140 (272)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEECCcHHHHHHHHHHcCc
Confidence 46889999999999999999999999988888777777776
No 90
>TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB. The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene.
Probab=96.74 E-value=0.0078 Score=64.31 Aligned_cols=109 Identities=15% Similarity=0.131 Sum_probs=74.7
Q ss_pred cccCCcHHHHH-HHHHcCCeEEEEeCCCHhhHHHHHHHcCccccCceEEEEecCCchhhhhhhhcchHHHHHHHHHHHHH
Q 001008 710 KLQKGVPECID-KLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTK 788 (1191)
Q Consensus 710 ~lr~~v~~~I~-~L~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 788 (1191)
.+.|++.++|+ .+++.|++++++|+-....+..+|+..++.... .++...-+
T Consensus 94 ~l~pga~e~L~~~l~~~G~~v~IvSas~~~~~~~ia~~~~~~~~~-~~i~t~le-------------------------- 146 (210)
T TIGR01545 94 TAFPLVAERLRQYLESSDADIWLITGSPQPLVEAVYFDSNFIHRL-NLIASQIE-------------------------- 146 (210)
T ss_pred CCCccHHHHHHHHHHhCCCEEEEEcCCcHHHHHHHHHhccccccC-cEEEEEeE--------------------------
Confidence 57899999996 788899999999999999999999986664321 22211100
Q ss_pred HHHhhcccccccccccceeEEEEeCchhhHHhHHHHHHHHHHHHhhcCceEEEcCChhhHHHHHHHh-hcCCCEEEEEcC
Q 001008 789 QIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLV-KGTGKTTLAIGD 867 (1191)
Q Consensus 789 ~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~l~~~~~~~v~~r~sP~qK~~iV~~l-~~~g~~vl~iGD 867 (1191)
+-+|.. +..-.|..++|..-++.. ........+-||
T Consensus 147 ---------------------~~~gg~----------------------~~g~~c~g~~Kv~rl~~~~~~~~~~~~aYsD 183 (210)
T TIGR01545 147 ---------------------RGNGGW----------------------VLPLRCLGHEKVAQLEQKIGSPLKLYSGYSD 183 (210)
T ss_pred ---------------------EeCCce----------------------EcCccCCChHHHHHHHHHhCCChhheEEecC
Confidence 001100 011234566887766544 322245679999
Q ss_pred CccChHhhhhcceeEEeccCc
Q 001008 868 GANDVGMLQEADIGVGISGVE 888 (1191)
Q Consensus 868 G~ND~~ml~~AdvGI~i~g~e 888 (1191)
+.||.|||+.||.++.+...+
T Consensus 184 S~~D~pmL~~a~~~~~Vnp~~ 204 (210)
T TIGR01545 184 SKQDNPLLAFCEHRWRVSKRG 204 (210)
T ss_pred CcccHHHHHhCCCcEEECcch
Confidence 999999999999999996543
No 91
>PRK13226 phosphoglycolate phosphatase; Provisional
Probab=96.62 E-value=0.0086 Score=65.20 Aligned_cols=41 Identities=22% Similarity=0.077 Sum_probs=36.0
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEeCCCHhhHHHHHHHcCcc
Q 001008 710 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLL 750 (1191)
Q Consensus 710 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gl~ 750 (1191)
++.||+.++++.|++.|+++.++|+.+...+..+-...|+.
T Consensus 95 ~~~pg~~~~L~~L~~~g~~l~i~Tn~~~~~~~~~l~~~~l~ 135 (229)
T PRK13226 95 QLFDGVEGMLQRLECAGCVWGIVTNKPEYLARLILPQLGWE 135 (229)
T ss_pred eeCCCHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCch
Confidence 57899999999999999999999999888777777777763
No 92
>PLN02580 trehalose-phosphatase
Probab=96.53 E-value=0.078 Score=61.14 Aligned_cols=65 Identities=17% Similarity=0.247 Sum_probs=46.9
Q ss_pred cCCh---hhHHHHHHHh-hcCC-----C-EEEEEcCCccChHhhhh-----cceeEEeccCccchhhhccceeccchhhh
Q 001008 842 RSSP---KQKALVTRLV-KGTG-----K-TTLAIGDGANDVGMLQE-----ADIGVGISGVEGMQAVMSSDYAIAQFRFL 906 (1191)
Q Consensus 842 r~sP---~qK~~iV~~l-~~~g-----~-~vl~iGDG~ND~~ml~~-----AdvGI~i~g~e~~~a~~~aD~vl~~f~~l 906 (1191)
.+.| .+|...|+.+ +..| . .++++||+.||..|++. +++||.|+.... .-.|+|.+.+-..+
T Consensus 293 EVrP~~g~~KG~Av~~Ll~~~g~~~~d~~~pi~iGDD~TDedmF~~L~~~~~G~~I~Vgn~~~---~t~A~y~L~dp~eV 369 (384)
T PLN02580 293 EVRPVIDWNKGKAVEFLLESLGLSNCDDVLPIYIGDDRTDEDAFKVLREGNRGYGILVSSVPK---ESNAFYSLRDPSEV 369 (384)
T ss_pred EEecCCCCCHHHHHHHHHHhcCCCcccceeEEEECCCchHHHHHHhhhccCCceEEEEecCCC---CccceEEcCCHHHH
Confidence 4455 4999999988 6554 1 25899999999999996 588888753222 24688998886555
Q ss_pred hHh
Q 001008 907 ERL 909 (1191)
Q Consensus 907 ~~l 909 (1191)
..+
T Consensus 370 ~~~ 372 (384)
T PLN02580 370 MEF 372 (384)
T ss_pred HHH
Confidence 544
No 93
>PLN03243 haloacid dehalogenase-like hydrolase; Provisional
Probab=96.48 E-value=0.013 Score=64.82 Aligned_cols=41 Identities=17% Similarity=0.122 Sum_probs=37.4
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEeCCCHhhHHHHHHHcCcc
Q 001008 710 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLL 750 (1191)
Q Consensus 710 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gl~ 750 (1191)
++.+|+.++++.|++.|+++.++|+.....+..+-..+|+.
T Consensus 109 ~l~pg~~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~ 149 (260)
T PLN03243 109 RLRPGSREFVQALKKHEIPIAVASTRPRRYLERAIEAVGME 149 (260)
T ss_pred ccCCCHHHHHHHHHHCCCEEEEEeCcCHHHHHHHHHHcCCH
Confidence 56899999999999999999999999999888888888874
No 94
>PRK13288 pyrophosphatase PpaX; Provisional
Probab=96.44 E-value=0.012 Score=63.34 Aligned_cols=41 Identities=20% Similarity=0.052 Sum_probs=37.1
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEeCCCHhhHHHHHHHcCcc
Q 001008 710 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLL 750 (1191)
Q Consensus 710 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gl~ 750 (1191)
++.+|+.++++.|+++|+++.++||.....+..+-...|+.
T Consensus 82 ~~~~g~~~~l~~L~~~g~~~~i~S~~~~~~~~~~l~~~gl~ 122 (214)
T PRK13288 82 TEYETVYETLKTLKKQGYKLGIVTTKMRDTVEMGLKLTGLD 122 (214)
T ss_pred ccCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCh
Confidence 37799999999999999999999999998888888888873
No 95
>smart00831 Cation_ATPase_N Cation transporter/ATPase, N-terminus. This entry represents the conserved N-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+, Na+, Ca2+, Na+/K+, and H+/K+. In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. In gastric H+/K+-ATPases, this domain undergoes reversible sequential phosphorylation inducing conformational changes that may be important for regulating the function of these ATPases PUBMED:12480547, PUBMED:12529322.
Probab=96.42 E-value=0.0024 Score=53.91 Aligned_cols=46 Identities=17% Similarity=0.104 Sum_probs=38.9
Q ss_pred ccccccCCCCceeecCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHhcc
Q 001008 48 PEVVQLNYRGNYVSTTKYTAANFIPKSLFEQFRRVANIYFLVVAFVSFS 96 (1191)
Q Consensus 48 ~~~~~~~~g~N~i~~~k~~~~~flp~~l~~qf~~~~n~~fl~~~il~~~ 96 (1191)
.+.|+++||.|.+..++.+.+. +.+++||.+|+.++++++++++++
T Consensus 16 v~~r~~~~G~N~l~~~~~~s~~---~~~l~~~~~p~~~iL~~~a~is~~ 61 (64)
T smart00831 16 AARRLERYGPNELPPPKKRSPL---LRFLRQFHNPLIYILLAAAVLSAL 61 (64)
T ss_pred HHHHHHHhCCCCCCCCCCCCHH---HHHHHHHHhHHHHHHHHHHHHHHH
Confidence 4567899999999998754432 889999999999999999998876
No 96
>PRK11590 hypothetical protein; Provisional
Probab=96.41 E-value=0.016 Score=62.23 Aligned_cols=109 Identities=14% Similarity=0.101 Sum_probs=75.7
Q ss_pred cccCCcHHHH-HHHHHcCCeEEEEeCCCHhhHHHHHHHcCccccCceEEEEecCCchhhhhhhhcchHHHHHHHHHHHHH
Q 001008 710 KLQKGVPECI-DKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTK 788 (1191)
Q Consensus 710 ~lr~~v~~~I-~~L~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 788 (1191)
.+.|++.++| +.+++.|++++++|+-....+..+++..|+.. ...++...-+
T Consensus 95 ~~~pga~e~L~~~l~~~G~~l~IvSas~~~~~~~il~~l~~~~-~~~~i~t~l~-------------------------- 147 (211)
T PRK11590 95 TAFPVVQERLTTYLLSSDADVWLITGSPQPLVEQVYFDTPWLP-RVNLIASQMQ-------------------------- 147 (211)
T ss_pred cCCccHHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHccccc-cCceEEEEEE--------------------------
Confidence 4589999999 57888999999999999999999999988632 1122211100
Q ss_pred HHHhhcccccccccccceeEEEEeCchhhHHhHHHHHHHHHHHHhhcCceEEEcCChhhHHHHHHHh-hcCCCEEEEEcC
Q 001008 789 QIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLV-KGTGKTTLAIGD 867 (1191)
Q Consensus 789 ~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~l~~~~~~~v~~r~sP~qK~~iV~~l-~~~g~~vl~iGD 867 (1191)
...+|.. ....|..+.|..-++.. ........+-||
T Consensus 148 --------------------~~~tg~~-----------------------~g~~c~g~~K~~~l~~~~~~~~~~~~aY~D 184 (211)
T PRK11590 148 --------------------RRYGGWV-----------------------LTLRCLGHEKVAQLERKIGTPLRLYSGYSD 184 (211)
T ss_pred --------------------EEEccEE-----------------------CCccCCChHHHHHHHHHhCCCcceEEEecC
Confidence 0111211 11235567887766654 323345678999
Q ss_pred CccChHhhhhcceeEEeccCc
Q 001008 868 GANDVGMLQEADIGVGISGVE 888 (1191)
Q Consensus 868 G~ND~~ml~~AdvGI~i~g~e 888 (1191)
+.||.|||+.|+-++.+....
T Consensus 185 s~~D~pmL~~a~~~~~vnp~~ 205 (211)
T PRK11590 185 SKQDNPLLYFCQHRWRVTPRG 205 (211)
T ss_pred CcccHHHHHhCCCCEEECccH
Confidence 999999999999999996554
No 97
>PRK13225 phosphoglycolate phosphatase; Provisional
Probab=96.41 E-value=0.017 Score=64.33 Aligned_cols=41 Identities=15% Similarity=0.173 Sum_probs=37.9
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEeCCCHhhHHHHHHHcCcc
Q 001008 710 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLL 750 (1191)
Q Consensus 710 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gl~ 750 (1191)
++.||+.++++.|++.|+++.++|+.....+..+-+..|+.
T Consensus 142 ~l~pg~~e~L~~L~~~gi~laIvSn~~~~~~~~~L~~~gl~ 182 (273)
T PRK13225 142 QLFPGVADLLAQLRSRSLCLGILSSNSRQNIEAFLQRQGLR 182 (273)
T ss_pred CcCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCh
Confidence 57899999999999999999999999999999998888873
No 98
>PRK10826 2-deoxyglucose-6-phosphatase; Provisional
Probab=96.40 E-value=0.012 Score=63.64 Aligned_cols=42 Identities=17% Similarity=0.180 Sum_probs=38.0
Q ss_pred ccccCCcHHHHHHHHHcCCeEEEEeCCCHhhHHHHHHHcCcc
Q 001008 709 DKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLL 750 (1191)
Q Consensus 709 D~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gl~ 750 (1191)
-++-||+.++++.|++.|+++.++||.....+..+.+..|+.
T Consensus 91 ~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~ 132 (222)
T PRK10826 91 RPLLPGVREALALCKAQGLKIGLASASPLHMLEAVLTMFDLR 132 (222)
T ss_pred CCCCCCHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHhCcch
Confidence 467899999999999999999999999988888888888874
No 99
>TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544. This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.
Probab=96.35 E-value=0.014 Score=64.09 Aligned_cols=47 Identities=19% Similarity=0.275 Sum_probs=41.9
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEeCCCHhhHHHHHHHcCccccCceE
Q 001008 710 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQ 756 (1191)
Q Consensus 710 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~ 756 (1191)
+++||+.+.++.|++.|+++.++||-....+..+.++.|+...+..+
T Consensus 121 ~l~pG~~efl~~L~~~GIpv~IvS~G~~~~Ie~vL~~lgl~~~~~~I 167 (277)
T TIGR01544 121 MLKDGYENFFDKLQQHSIPVFIFSAGIGNVLEEVLRQAGVYHPNVKV 167 (277)
T ss_pred ccCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHHcCCCCcCceE
Confidence 57999999999999999999999999999999999999987555433
No 100
>TIGR00685 T6PP trehalose-phosphatase. At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes.
Probab=96.34 E-value=0.059 Score=59.21 Aligned_cols=65 Identities=11% Similarity=0.108 Sum_probs=48.1
Q ss_pred cCChhhHHHHHHHh-hcCC---CEEEEEcCCccChHhhhhc--------ceeEEeccCccchhhhccceeccchhhhhHh
Q 001008 842 RSSPKQKALVTRLV-KGTG---KTTLAIGDGANDVGMLQEA--------DIGVGISGVEGMQAVMSSDYAIAQFRFLERL 909 (1191)
Q Consensus 842 r~sP~qK~~iV~~l-~~~g---~~vl~iGDG~ND~~ml~~A--------dvGI~i~g~e~~~a~~~aD~vl~~f~~l~~l 909 (1191)
+..+.+|...++.+ +..+ ..++++||+.||..|++.+ ..||.+. .+. .+..|++++.+...+...
T Consensus 162 ~p~~~~Kg~a~~~~~~~~~~~~~~~i~iGD~~~D~~~~~~~~~~~~~~g~~~v~v~--~g~-~~~~A~~~~~~~~~v~~~ 238 (244)
T TIGR00685 162 KPRFVNKGEIVKRLLWHQPGSGISPVYLGDDITDEDAFRVVNNQWGNYGFYPVPIG--SGS-KKTVAKFHLTGPQQVLEF 238 (244)
T ss_pred eeCCCCHHHHHHHHHHhcccCCCceEEEcCCCcHHHHHHHHhcccCCCCeEEEEEe--cCC-cCCCceEeCCCHHHHHHH
Confidence 34456899888888 5544 4799999999999999999 4667664 121 356799999887665554
No 101
>PF00690 Cation_ATPase_N: Cation transporter/ATPase, N-terminus; InterPro: IPR004014 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane. ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the conserved N-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+ (3.6.3.6 from EC), Na+ (3.6.3.7 from EC), Ca2+ (3.6.3.8 from EC), Na+/K+ (3.6.3.9 from EC), and H+/K+ (3.6.3.10 from EC). In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. In gastric H+/K+-ATPases, this domain undergoes reversible sequential phosphorylation inducing conformational changes that may be important for regulating the function of these ATPases [, ]. More information about this protein can be found at Protein of the Month: ATP Synthases [].; PDB: 3KDP_C 3N2F_A 3B8E_A 3N23_A 2XZB_A 1MHS_B 3A3Y_A 2ZXE_A 3B8C_A 3B9B_A ....
Probab=96.20 E-value=0.0021 Score=55.24 Aligned_cols=45 Identities=22% Similarity=0.279 Sum_probs=37.4
Q ss_pred CccccccCCCCceeecCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHh
Q 001008 47 NPEVVQLNYRGNYVSTTKYTAANFIPKSLFEQFRRVANIYFLVVAFVS 94 (1191)
Q Consensus 47 ~~~~~~~~~g~N~i~~~k~~~~~flp~~l~~qf~~~~n~~fl~~~il~ 94 (1191)
+.+.|+++||.|.++..+...+. +.+++||.+|++++++++++++
T Consensus 25 ev~~r~~~~G~N~l~~~~~~s~~---~~~~~~f~~~~~~lL~~aailS 69 (69)
T PF00690_consen 25 EVEERRKKYGPNELPEPKKKSLW---RIFLKQFKNPFIILLLIAAILS 69 (69)
T ss_dssp HHHHHHHHHSSSSTTTTTSSSHH---HHHHHHTTSHHHHHHHHHHHHH
T ss_pred HHHHHHHhcccccccccccCcHH---HHHHHHHHhHHHHHHHHHHHHC
Confidence 34568899999999766665543 8999999999999999999875
No 102
>PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria []. SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B ....
Probab=96.19 E-value=0.015 Score=63.98 Aligned_cols=166 Identities=17% Similarity=0.239 Sum_probs=80.8
Q ss_pred HHHHHHcCCeEEEEeCCCHhhHHHHHHHcCccccCceEEEEecCCchhhh---hh-hhcchHHHHHHHH-HHHHHHHHhh
Q 001008 719 IDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEA---LE-KQGDKENITKVSL-ESVTKQIREG 793 (1191)
Q Consensus 719 I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~---~~-~~~~~~~~~~~~~-~~~~~~~~~~ 793 (1191)
++...+.++..+++||++.+.+..+.++.++..++ +.+.....+... +. ...-.+.+..... +.+..-+..
T Consensus 28 l~~~~~~~~~~v~~TGRs~~~~~~~~~~~~l~~Pd---~~I~svGt~I~~~~~~~~d~~w~~~i~~~w~~~~v~~~l~~- 103 (247)
T PF05116_consen 28 LEQQARPEILFVYVTGRSLESVLRLLREYNLPQPD---YIITSVGTEIYYGENWQPDEEWQAHIDERWDRERVEEILAE- 103 (247)
T ss_dssp HHHHHCCGEEEEEE-SS-HHHHHHHHHHCT-EE-S---EEEETTTTEEEESSTTEE-HHHHHHHHTT--HHHHHHHHHC-
T ss_pred HHHhhCCCceEEEECCCCHHHHHHHHHhCCCCCCC---EEEecCCeEEEEcCCCcChHHHHHHHHhcCChHHHHHHHHH-
Confidence 33344778999999999999999999999986543 122211111000 00 0000111111111 111111111
Q ss_pred cccccc-cc--cccceeEEEEeCchhhHHhHHHHHHHHHHHHhhcCce----EEEcCCh--hhHHHHHHHh-hcCC---C
Q 001008 794 ISQVNS-AK--ESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASV----ICCRSSP--KQKALVTRLV-KGTG---K 860 (1191)
Q Consensus 794 ~~~~~~-~~--~~~~~~~lvi~G~~l~~~~~~~~~~~~~~l~~~~~~~----v~~r~sP--~qK~~iV~~l-~~~g---~ 860 (1191)
...+.. .. ....+.+..++.......+ +++...+..-...|+.+ -+..+.| ..|...|+.+ +..+ .
T Consensus 104 ~~~l~~q~~~~q~~~k~sy~~~~~~~~~~~-~~i~~~l~~~~l~~~~i~s~~~~ldilP~~a~K~~Al~~L~~~~~~~~~ 182 (247)
T PF05116_consen 104 LPGLRPQPESEQRPFKISYYVDPDDSADIL-EEIRARLRQRGLRVNVIYSNGRDLDILPKGASKGAALRYLMERWGIPPE 182 (247)
T ss_dssp HCCEEEGGCCCGCCTCECEEEETTSHCHHH-HHHHHHHHCCTCEEEEEECTCCEEEEEETT-SHHHHHHHHHHHHT--GG
T ss_pred hhCcccCCccccCCeeEEEEEecccchhHH-HHHHHHHHHcCCCeeEEEccceeEEEccCCCCHHHHHHHHHHHhCCCHH
Confidence 111111 11 1122444555555444322 23444433222222211 1123334 4799999999 4444 4
Q ss_pred EEEEEcCCccChHhhhhcceeEEeccCcc
Q 001008 861 TTLAIGDGANDVGMLQEADIGVGISGVEG 889 (1191)
Q Consensus 861 ~vl~iGDG~ND~~ml~~AdvGI~i~g~e~ 889 (1191)
.|+++||+.||.+||..++-||.+.+.+.
T Consensus 183 ~vl~aGDSgND~~mL~~~~~~vvV~Na~~ 211 (247)
T PF05116_consen 183 QVLVAGDSGNDLEMLEGGDHGVVVGNAQP 211 (247)
T ss_dssp GEEEEESSGGGHHHHCCSSEEEE-TTS-H
T ss_pred HEEEEeCCCCcHHHHcCcCCEEEEcCCCH
Confidence 68889999999999999999998865543
No 103
>PLN02423 phosphomannomutase
Probab=96.17 E-value=0.018 Score=63.26 Aligned_cols=42 Identities=19% Similarity=0.356 Sum_probs=36.4
Q ss_pred hHHHHHHHhhcCCCEEEEEcC----CccChHhhhh-cceeEEeccCcc
Q 001008 847 QKALVTRLVKGTGKTTLAIGD----GANDVGMLQE-ADIGVGISGVEG 889 (1191)
Q Consensus 847 qK~~iV~~l~~~g~~vl~iGD----G~ND~~ml~~-AdvGI~i~g~e~ 889 (1191)
+|+.-++.++ ....|+++|| |.||.+||+. .=.|+.++|.+.
T Consensus 189 nKg~al~~L~-~~~e~~aFGD~~~~~~ND~eMl~~~~~~~~~~~~~~~ 235 (245)
T PLN02423 189 DKTYCLQFLE-DFDEIHFFGDKTYEGGNDHEIFESERTIGHTVTSPDD 235 (245)
T ss_pred CHHHHHHHhc-CcCeEEEEeccCCCCCCcHHHHhCCCcceEEeCCHHH
Confidence 8999999998 6678999999 8999999996 777888877654
No 104
>COG4030 Uncharacterized protein conserved in archaea [Function unknown]
Probab=96.05 E-value=0.028 Score=57.71 Aligned_cols=158 Identities=22% Similarity=0.228 Sum_probs=85.7
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEeCCCHhhHHHHHHHcCccccCceEEEEecCCchhhhhhhhcchHHHHHHHHHHHHHH
Q 001008 710 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQ 789 (1191)
Q Consensus 710 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 (1191)
++-||+.++++.|++. ...+++|---..-+..+|.-+|+-..+...-.++.++.... +...+++...
T Consensus 83 ~lvPgA~etm~~l~~~-~tp~v~STSY~qy~~r~a~~ig~Prg~~~~Te~~lD~~~~P------------eeeR~E~L~~ 149 (315)
T COG4030 83 KLVPGAEETMATLQER-WTPVVISTSYTQYLRRTASMIGVPRGELHGTEVDLDSIAVP------------EEEREELLSI 149 (315)
T ss_pred ccCCChHHHHHHHhcc-CCceEEeccHHHHHHHHHHhcCCCccccccccccCccccCC------------hHHHHHHHHh
Confidence 4669999999998865 44555555556667788888887443322211111111000 0000111111
Q ss_pred HHhhcccccccccccceeEEEEeCchhhHHhHHHHH----HHHHHHHhhcCceEEEcCChhhHHHHHHHh-h--cCCCEE
Q 001008 790 IREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLE----KMFLDLAIDCASVICCRSSPKQKALVTRLV-K--GTGKTT 862 (1191)
Q Consensus 790 ~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~----~~~~~l~~~~~~~v~~r~sP~qK~~iV~~l-~--~~g~~v 862 (1191)
+. ..-.++|++|-.-+++-+. ....+++...++|- -..|+++++.+ . ......
T Consensus 150 ~~---------------~~~~~~geelfe~lDe~F~rLip~E~gki~~~vk~VG-----gg~ka~i~e~~~ele~~d~sa 209 (315)
T COG4030 150 ID---------------VIASLSGEELFEKLDELFSRLIPSEVGKIVESVKAVG-----GGEKAKIMEGYCELEGIDFSA 209 (315)
T ss_pred cC---------------ccccccHHHHHHHHHHHHhhcCHHHHHHHHHhhhhcc-----CcchhHHHHHHHhhcCCCcce
Confidence 10 0114455554433332110 11222222222211 13567777766 2 223447
Q ss_pred EEEcCCccChHhhhhcc----eeEEeccCccchhhhccceeccc
Q 001008 863 LAIGDGANDVGMLQEAD----IGVGISGVEGMQAVMSSDYAIAQ 902 (1191)
Q Consensus 863 l~iGDG~ND~~ml~~Ad----vGI~i~g~e~~~a~~~aD~vl~~ 902 (1191)
+.+||+..|+.||+.+. +.|+..|++- |...||+.+..
T Consensus 210 ~~VGDSItDv~ml~~~rgrGglAvaFNGNeY--al~eAdVAvis 251 (315)
T COG4030 210 VVVGDSITDVKMLEAARGRGGLAVAFNGNEY--ALKEADVAVIS 251 (315)
T ss_pred eEecCcccchHHHHHhhccCceEEEecCCcc--cccccceEEec
Confidence 89999999999999873 6677788887 88899998865
No 105
>PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming]
Probab=96.04 E-value=0.23 Score=63.95 Aligned_cols=202 Identities=13% Similarity=0.111 Sum_probs=99.5
Q ss_pred ccceEEEeeeecccccCCcHHHHHHH-HHcCCeEEEEeCCCHhhHHHHHHH---cCccccCceEEEEecCCchhhhhhhh
Q 001008 697 RDLILLGATAVEDKLQKGVPECIDKL-AQAGIKVWVLTGDKMETAINIGYA---CSLLRQEMKQIVITLDSPDMEALEKQ 772 (1191)
Q Consensus 697 ~dl~llG~~~ieD~lr~~v~~~I~~L-~~aGIkv~mlTGD~~~ta~~ia~~---~gl~~~~~~~~~i~~~~~~~~~~~~~ 772 (1191)
-|.||+-.....-.+-+++.++++.| ++.|+.|+++||+...+....-.. ++++.++...+...+... +..
T Consensus 603 yDGTLlp~~~~~~~p~~~~~~~L~~L~~d~g~~VaIvSGR~~~~L~~~f~~~~~l~laaEHG~~ir~~~~~~----w~~- 677 (854)
T PLN02205 603 YDGTLMPQASIDKSPSSKSIDILNTLCRDKNNMVFIVSARSRKTLADWFSPCEKLGIAAEHGYFLRLKRDVE----WET- 677 (854)
T ss_pred cCCcccCCccccCCCCHHHHHHHHHHHhcCCCEEEEEeCCCHHHHHHHhCCCCCeEEEEeCCEEEEeCCCce----eee-
Confidence 35555533222224556788899987 778999999999999998876643 456655554433222110 000
Q ss_pred cchHHHHHHHHHHHHHHHHhhcccccccccccceeEEEEeCchhhHH----hHHHHHHHHHHHHhhcCceE-----EEcC
Q 001008 773 GDKENITKVSLESVTKQIREGISQVNSAKESKVTFGLVIDGKSLDFA----LDKKLEKMFLDLAIDCASVI-----CCRS 843 (1191)
Q Consensus 773 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~----~~~~~~~~~~~l~~~~~~~v-----~~r~ 843 (1191)
.....+...++....-........+...-.....+++.+-...+.- ..+++..++..........+ .-.+
T Consensus 678 -~~~~~~~~w~~~v~~i~~~y~ertpGs~IE~K~~slv~HyR~adpd~~~~qa~el~~~l~~~l~~~~~~v~~G~~vvEV 756 (854)
T PLN02205 678 -CVPVADCSWKQIAEPVMQLYTETTDGSTIEDKETALVWCYEDADPDFGSCQAKELLDHLESVLANEPVTVKSGQNIVEV 756 (854)
T ss_pred -cchhhhHHHHHHHHHHHHHHhcCCCchhheecceEEEEehhhCChHHhhhhhHHHHHHHHHHHhcCceEEEECCcEEEE
Confidence 0000011111111000100001111111122344444443322111 11234444433322211111 1122
Q ss_pred Ch--hhHHHHHHHh-hc---CC---CEEEEEcCCccChHhhhhcc--------------eeEEeccCccchhhhccceec
Q 001008 844 SP--KQKALVTRLV-KG---TG---KTTLAIGDGANDVGMLQEAD--------------IGVGISGVEGMQAVMSSDYAI 900 (1191)
Q Consensus 844 sP--~qK~~iV~~l-~~---~g---~~vl~iGDG~ND~~ml~~Ad--------------vGI~i~g~e~~~a~~~aD~vl 900 (1191)
.| ..|+..++.+ +. .| ..++++||+.||..|++.++ ++|.+ |.. ...|.+-+
T Consensus 757 ~p~gvnKG~Al~~Ll~~~~~~g~~~d~vl~~GDD~nDedMF~~~~~~~~g~~~~~~~~~~~v~V-G~~----~S~A~y~L 831 (854)
T PLN02205 757 KPQGVSKGLVAKRLLSIMQERGMLPDFVLCIGDDRSDEDMFEVITSSMAGPSIAPRAEVFACTV-GQK----PSKAKYYL 831 (854)
T ss_pred EeCCCCHHHHHHHHHHHHHhcCCCcccEEEEcCCccHHHHHHHhhhhccCCcccccccceeEEE-CCC----CccCeEec
Confidence 33 4799988888 22 23 37999999999999999886 34444 321 24567777
Q ss_pred cchhhhhHh
Q 001008 901 AQFRFLERL 909 (1191)
Q Consensus 901 ~~f~~l~~l 909 (1191)
.+-..+..+
T Consensus 832 ~d~~eV~~l 840 (854)
T PLN02205 832 DDTAEIVRL 840 (854)
T ss_pred CCHHHHHHH
Confidence 776555555
No 106
>PRK11587 putative phosphatase; Provisional
Probab=95.98 E-value=0.031 Score=60.28 Aligned_cols=40 Identities=20% Similarity=0.198 Sum_probs=32.9
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEeCCCHhhHHHHHHHcCc
Q 001008 710 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSL 749 (1191)
Q Consensus 710 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gl 749 (1191)
++.||+.++++.|+++|+++.++|+.....+...-...|+
T Consensus 83 ~~~pg~~e~L~~L~~~g~~~~ivTn~~~~~~~~~l~~~~l 122 (218)
T PRK11587 83 TALPGAIALLNHLNKLGIPWAIVTSGSVPVASARHKAAGL 122 (218)
T ss_pred eeCcCHHHHHHHHHHcCCcEEEEcCCCchHHHHHHHhcCC
Confidence 5789999999999999999999999877665555555555
No 107
>TIGR03351 PhnX-like phosphonatase-like hydrolase. This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the
Probab=95.94 E-value=0.03 Score=60.46 Aligned_cols=42 Identities=26% Similarity=0.200 Sum_probs=38.5
Q ss_pred ccccCCcHHHHHHHHHcCCeEEEEeCCCHhhHHHHHHHcCcc
Q 001008 709 DKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLL 750 (1191)
Q Consensus 709 D~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gl~ 750 (1191)
.++.+|+.+.++.|++.|+++.++||-....+..+.+..|+.
T Consensus 86 ~~l~~G~~~~L~~L~~~g~~~~ivT~~~~~~~~~~l~~~~l~ 127 (220)
T TIGR03351 86 PVALPGAEEAFRSLRSSGIKVALTTGFDRDTAERLLEKLGWT 127 (220)
T ss_pred CccCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHhhhh
Confidence 479999999999999999999999999999998888888874
No 108
>PLN02575 haloacid dehalogenase-like hydrolase
Probab=95.65 E-value=0.059 Score=62.20 Aligned_cols=41 Identities=17% Similarity=0.156 Sum_probs=37.7
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEeCCCHhhHHHHHHHcCcc
Q 001008 710 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLL 750 (1191)
Q Consensus 710 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gl~ 750 (1191)
++.+|+.++++.|+++|+++.++|+-....+..+-+..||.
T Consensus 216 ~l~pGa~ElL~~Lk~~GiklaIaSn~~~~~~~~~L~~lgL~ 256 (381)
T PLN02575 216 RLRTGSQEFVNVLMNYKIPMALVSTRPRKTLENAIGSIGIR 256 (381)
T ss_pred CcCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCH
Confidence 47799999999999999999999999999999988888874
No 109
>TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent.
Probab=95.56 E-value=0.054 Score=59.97 Aligned_cols=41 Identities=29% Similarity=0.218 Sum_probs=36.6
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEeCCCHhhHHHHHHHcCcc
Q 001008 710 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLL 750 (1191)
Q Consensus 710 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gl~ 750 (1191)
++-||+.++++.|++.|+++.++||.....+..+-+..|+.
T Consensus 99 ~~~pg~~e~L~~L~~~g~~l~IvT~~~~~~~~~~l~~~gl~ 139 (253)
T TIGR01422 99 SPIPGVIEVIAYLRARGIKIGSTTGYTREMMDVVAPEAALQ 139 (253)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHHHHhc
Confidence 46799999999999999999999999999888888877774
No 110
>PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated
Probab=95.33 E-value=0.08 Score=64.08 Aligned_cols=41 Identities=15% Similarity=0.099 Sum_probs=38.1
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEeCCCHhhHHHHHHHcCcc
Q 001008 710 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLL 750 (1191)
Q Consensus 710 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gl~ 750 (1191)
++.||+.++++.|++.|+++.++|+-....+..+...+|+.
T Consensus 330 ~l~pG~~e~L~~Lk~~g~~l~IvS~~~~~~~~~~l~~~~l~ 370 (459)
T PRK06698 330 ALYPNVKEIFTYIKENNCSIYIASNGLTEYLRAIVSYYDLD 370 (459)
T ss_pred CcCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHCCcH
Confidence 67899999999999999999999999999999998888874
No 111
>TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672. Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion.
Probab=95.33 E-value=0.031 Score=60.52 Aligned_cols=41 Identities=12% Similarity=0.142 Sum_probs=35.4
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEeCC----CHhhHHHHHHHcCcc
Q 001008 710 KLQKGVPECIDKLAQAGIKVWVLTGD----KMETAINIGYACSLL 750 (1191)
Q Consensus 710 ~lr~~v~~~I~~L~~aGIkv~mlTGD----~~~ta~~ia~~~gl~ 750 (1191)
.+.+++.+.++.+++.|+++.++|+. ...++..+.+..|+.
T Consensus 114 ~p~~~a~elL~~l~~~G~~i~iVTnr~~~k~~~~a~~ll~~lGi~ 158 (237)
T TIGR01672 114 IPKEVARQLIDMHQRRGDAIFFVTGRTPGKTDTVSKTLAKNFHIP 158 (237)
T ss_pred cchhHHHHHHHHHHHCCCEEEEEeCCCCCcCHHHHHHHHHHhCCc
Confidence 34455999999999999999999998 667899998889983
No 112
>PRK06769 hypothetical protein; Validated
Probab=95.32 E-value=0.12 Score=53.34 Aligned_cols=41 Identities=24% Similarity=0.256 Sum_probs=31.8
Q ss_pred ccceEEEeeeecc----cccCCcHHHHHHHHHcCCeEEEEeCCCH
Q 001008 697 RDLILLGATAVED----KLQKGVPECIDKLAQAGIKVWVLTGDKM 737 (1191)
Q Consensus 697 ~dl~llG~~~ieD----~lr~~v~~~I~~L~~aGIkv~mlTGD~~ 737 (1191)
.|.++.|-..+.+ ++.||+.++++.|++.|+++.++|+...
T Consensus 11 ~d~~~~~~~~~~~~~~~~~~pgv~e~L~~Lk~~G~~l~I~Tn~~~ 55 (173)
T PRK06769 11 RDGTIGGDTTIHYPGSFTLFPFTKASLQKLKANHIKIFSFTNQPG 55 (173)
T ss_pred CCCcccCCCCCCCHHHeEECCCHHHHHHHHHHCCCEEEEEECCch
Confidence 4556655544443 2689999999999999999999998753
No 113
>TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548. All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's.
Probab=95.30 E-value=0.059 Score=57.09 Aligned_cols=43 Identities=21% Similarity=0.108 Sum_probs=38.5
Q ss_pred cccccCCcHHHHHHHHHcCCeEEEEeCCCHhhHHHHHHHcCcc
Q 001008 708 EDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLL 750 (1191)
Q Consensus 708 eD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gl~ 750 (1191)
.+++.+++.++++.|++.|+++.++||-....+..+.+..|+.
T Consensus 104 ~~~~~~~~~~~L~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~ 146 (197)
T TIGR01548 104 EDETLLTPKGLLRELHRAPKGMAVVTGRPRKDAAKFLTTHGLE 146 (197)
T ss_pred ccccccCHHHHHHHHHHcCCcEEEECCCCHHHHHHHHHHcCch
Confidence 4557778899999999999999999999999999999999874
No 114
>smart00775 LNS2 LNS2 domain. This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance.
Probab=95.19 E-value=0.11 Score=52.78 Aligned_cols=34 Identities=24% Similarity=0.305 Sum_probs=31.4
Q ss_pred cccccCCcHHHHHHHHHcCCeEEEEeCCCHhhHH
Q 001008 708 EDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAI 741 (1191)
Q Consensus 708 eD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~ 741 (1191)
+|.+.+++.++++.++++|++++++||+....+.
T Consensus 25 ~~~~~~~~~~a~~~l~~~G~~ivy~TGRp~~~~~ 58 (157)
T smart00775 25 KDWTHPGVAKLYRDIQNNGYKILYLTARPIGQAD 58 (157)
T ss_pred cCcCCHHHHHHHHHHHHcCCeEEEEcCCcHHHHH
Confidence 5788999999999999999999999999988774
No 115
>PLN03017 trehalose-phosphatase
Probab=95.15 E-value=0.9 Score=52.12 Aligned_cols=204 Identities=15% Similarity=0.105 Sum_probs=102.9
Q ss_pred ccceEEEeeeecc--cccCCcHHHHHHHHHcCCeEEEEeCCCHhhHHHHHHHcCccccCceEEEEecCC-----chhhhh
Q 001008 697 RDLILLGATAVED--KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDS-----PDMEAL 769 (1191)
Q Consensus 697 ~dl~llG~~~ieD--~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~-----~~~~~~ 769 (1191)
-|.||+-++.-.| .+-++..++|++|. .|++++++||+......... ++ .+..++..++.. ......
T Consensus 118 ~DGTL~Piv~~p~~a~i~~~~~~aL~~La-~~~~vaIvSGR~~~~l~~~~---~l--~~l~l~g~hGa~i~~p~~~~~~~ 191 (366)
T PLN03017 118 YDGTLSPIVDDPDKAFMSSKMRRTVKKLA-KCFPTAIVTGRCIDKVYNFV---KL--AELYYAGSHGMDIKGPAKGFSRH 191 (366)
T ss_pred cCCcCcCCcCCcccccCCHHHHHHHHHHh-cCCcEEEEeCCCHHHHHHhh---cc--cCceEEEcCCcEEecCCCcceec
Confidence 3666665554333 36788899999999 78999999999999888773 22 111222211110 000000
Q ss_pred hhhc-----chHHHHHHHHHHHHHHHHhhcccccccccccceeEEEEeCchhhHHhHHHHHHHHHHHHhhcCc------e
Q 001008 770 EKQG-----DKENITKVSLESVTKQIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCAS------V 838 (1191)
Q Consensus 770 ~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~l~~~~~~------~ 838 (1191)
.... ....-.....+.+...+...........-....+++.+.-...+.....++..++..++..... .
T Consensus 192 ~~~~~~~~~~~~~~~~~~i~~v~~~L~~~~~~~pGa~VE~K~~~vavHyR~ad~~~~~~l~~~~~~vl~~~~~l~v~~Gk 271 (366)
T PLN03017 192 KRVKQSLLYQPANDYLPMIDEVYRQLLEKTKSTPGAKVENHKFCASVHFRCVDEKKWSELVLQVRSVLKNFPTLKLTQGR 271 (366)
T ss_pred cccccccccccchhhHHHHHHHHHHHHHHHhcCCCCEEEecCcEEEEEcCcCCHHHHHHHHHHHHHHHHhCCCcEEeCCC
Confidence 0000 0000000011122222222111222222233455666554443322212333334333322221 1
Q ss_pred EEEcCCh---hhHHHHHHHh-hcCC------CEEEEEcCCccChHhhhhcc-----eeEEeccCccchhhhccceeccch
Q 001008 839 ICCRSSP---KQKALVTRLV-KGTG------KTTLAIGDGANDVGMLQEAD-----IGVGISGVEGMQAVMSSDYAIAQF 903 (1191)
Q Consensus 839 v~~r~sP---~qK~~iV~~l-~~~g------~~vl~iGDG~ND~~ml~~Ad-----vGI~i~g~e~~~a~~~aD~vl~~f 903 (1191)
-.-.+.| .+|...++.+ +..| ..++++||-..|-.|++... +||.++.... ...|+|.+.+-
T Consensus 272 kVlEvRP~~~~dKG~Av~~LL~~l~~~~~~~~~pvyiGDD~TDEDaF~~L~~~~~G~gI~VG~~~k---~T~A~y~L~dp 348 (366)
T PLN03017 272 KVFEIRPMIEWDKGKALEFLLESLGFGNTNNVFPVYIGDDRTDEDAFKMLRDRGEGFGILVSKFPK---DTDASYSLQDP 348 (366)
T ss_pred eEEEecCCCCCCHHHHHHHHHHhcccccCCCceEEEeCCCCccHHHHHHHhhcCCceEEEECCCCC---CCcceEeCCCH
Confidence 1223444 4999999988 5443 36899999999999998763 4554532122 35688998875
Q ss_pred hhhhHh
Q 001008 904 RFLERL 909 (1191)
Q Consensus 904 ~~l~~l 909 (1191)
..+..+
T Consensus 349 ~eV~~f 354 (366)
T PLN03017 349 SEVMDF 354 (366)
T ss_pred HHHHHH
Confidence 554444
No 116
>PRK13478 phosphonoacetaldehyde hydrolase; Provisional
Probab=95.05 E-value=0.14 Score=57.19 Aligned_cols=40 Identities=28% Similarity=0.169 Sum_probs=34.5
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEeCCCHhhHHHHHHHcCc
Q 001008 710 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSL 749 (1191)
Q Consensus 710 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gl 749 (1191)
++-||+.++++.|++.|+++.++||.....+..+-+..|+
T Consensus 101 ~~~pg~~elL~~L~~~g~~l~I~T~~~~~~~~~~l~~~~l 140 (267)
T PRK13478 101 TPIPGVLEVIAALRARGIKIGSTTGYTREMMDVVVPLAAA 140 (267)
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHHhh
Confidence 5679999999999999999999999988877766666665
No 117
>TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549).
Probab=95.00 E-value=0.13 Score=55.47 Aligned_cols=40 Identities=13% Similarity=0.162 Sum_probs=35.5
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEeCCCHhhHHHHHHHcCc
Q 001008 710 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSL 749 (1191)
Q Consensus 710 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gl 749 (1191)
++.||+.++++.|++.|++++++|+-....+......+|+
T Consensus 94 ~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~~l 133 (221)
T TIGR02253 94 RVYPGVRDTLMELRESGYRLGIITDGLPVKQWEKLERLGV 133 (221)
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHhCCh
Confidence 5789999999999999999999999887777777777776
No 118
>PLN02779 haloacid dehalogenase-like hydrolase family protein
Probab=94.92 E-value=0.11 Score=58.58 Aligned_cols=38 Identities=29% Similarity=0.296 Sum_probs=31.7
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEeCCCHhhHHHHHHHc
Q 001008 710 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYAC 747 (1191)
Q Consensus 710 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~ 747 (1191)
++.||+.++++.|++.|+++.++|+-.......+-...
T Consensus 144 ~l~pGv~elL~~L~~~g~~l~IvTn~~~~~~~~~l~~~ 181 (286)
T PLN02779 144 PLRPGVLRLMDEALAAGIKVAVCSTSNEKAVSKIVNTL 181 (286)
T ss_pred CchhhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHh
Confidence 57899999999999999999999998777666554433
No 119
>PRK11009 aphA acid phosphatase/phosphotransferase; Provisional
Probab=94.87 E-value=0.057 Score=58.42 Aligned_cols=40 Identities=13% Similarity=0.186 Sum_probs=34.8
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEeCCC----HhhHHHHHHHcCc
Q 001008 710 KLQKGVPECIDKLAQAGIKVWVLTGDK----METAINIGYACSL 749 (1191)
Q Consensus 710 ~lr~~v~~~I~~L~~aGIkv~mlTGD~----~~ta~~ia~~~gl 749 (1191)
.+.+++.+.++.|++.|+++.++||+. ..|+.++.+..|+
T Consensus 114 ~p~~Ga~elL~~L~~~G~~I~iVTnR~~~k~~~t~~~Llk~~gi 157 (237)
T PRK11009 114 IPKEVARQLIDMHVKRGDSIYFITGRTATKTETVSKTLADDFHI 157 (237)
T ss_pred cchHHHHHHHHHHHHCCCeEEEEeCCCCcccHHHHHHHHHHcCC
Confidence 467889999999999999999999964 5688888887887
No 120
>PLN02770 haloacid dehalogenase-like hydrolase family protein
Probab=94.71 E-value=0.13 Score=56.64 Aligned_cols=41 Identities=20% Similarity=0.074 Sum_probs=37.5
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEeCCCHhhHHHHHHHcCcc
Q 001008 710 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLL 750 (1191)
Q Consensus 710 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gl~ 750 (1191)
++.||+.++++.|++.|+++.++|+-....+..+-+..|+.
T Consensus 108 ~l~pgv~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~ 148 (248)
T PLN02770 108 KPLNGLYKLKKWIEDRGLKRAAVTNAPRENAELMISLLGLS 148 (248)
T ss_pred CcCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCCh
Confidence 57899999999999999999999999999998888888874
No 121
>TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA. In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme.
Probab=94.65 E-value=0.12 Score=50.74 Aligned_cols=41 Identities=22% Similarity=0.255 Sum_probs=34.7
Q ss_pred ccccCCcHHHHHHHHHcCCeEEEEeCCC--------HhhHHHHHHHcCc
Q 001008 709 DKLQKGVPECIDKLAQAGIKVWVLTGDK--------METAINIGYACSL 749 (1191)
Q Consensus 709 D~lr~~v~~~I~~L~~aGIkv~mlTGD~--------~~ta~~ia~~~gl 749 (1191)
-++.+++.++++.|+++|+++.++|+.. ...+..+.+..|+
T Consensus 24 ~~~~~~v~~~l~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~~l~~~~l 72 (132)
T TIGR01662 24 RILYPEVPDALAELKEAGYKVVIVTNQSGIGRGKFSSGRVARRLEELGV 72 (132)
T ss_pred heeCCCHHHHHHHHHHCCCEEEEEECCccccccHHHHHHHHHHHHHCCC
Confidence 3678999999999999999999999988 5666667777666
No 122
>PHA02530 pseT polynucleotide kinase; Provisional
Probab=94.53 E-value=0.071 Score=60.65 Aligned_cols=44 Identities=20% Similarity=0.097 Sum_probs=40.4
Q ss_pred ecccccCCcHHHHHHHHHcCCeEEEEeCCCHhhHHHHHHHcCcc
Q 001008 707 VEDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLL 750 (1191)
Q Consensus 707 ieD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gl~ 750 (1191)
..+++.+++.++++.|++.|++++++||....++..+.+.+|+.
T Consensus 184 ~~~~~~~~~~~~l~~l~~~g~~i~i~T~r~~~~~~~~l~~l~~~ 227 (300)
T PHA02530 184 KEDKPNPMVVELVKMYKAAGYEIIVVSGRDGVCEEDTVEWLRQT 227 (300)
T ss_pred ccCCCChhHHHHHHHHHhCCCEEEEEeCCChhhHHHHHHHHHHc
Confidence 56789999999999999999999999999999999888888773
No 123
>PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated
Probab=94.48 E-value=0.2 Score=52.22 Aligned_cols=51 Identities=14% Similarity=0.110 Sum_probs=34.7
Q ss_pred CCEEEEEcCCccChHhhhhcceeE-Eec-cCccc-hhhhcc--ceeccchhhhhHh
Q 001008 859 GKTTLAIGDGANDVGMLQEADIGV-GIS-GVEGM-QAVMSS--DYAIAQFRFLERL 909 (1191)
Q Consensus 859 g~~vl~iGDG~ND~~ml~~AdvGI-~i~-g~e~~-~a~~~a--D~vl~~f~~l~~l 909 (1191)
...+++|||+.+|+.+-+.|++.. ++. |.... .....+ |+++.++..+..+
T Consensus 120 ~~~~~~VgDs~~Di~~A~~aG~~~i~v~~g~~~~~~~~~~~~~~~ii~~l~el~~~ 175 (181)
T PRK08942 120 LAGSPMVGDSLRDLQAAAAAGVTPVLVRTGKGVTTLAEGAAPGTWVLDSLADLPQA 175 (181)
T ss_pred hhhEEEEeCCHHHHHHHHHCCCeEEEEcCCCCchhhhcccCCCceeecCHHHHHHH
Confidence 357999999999999999999864 442 22111 112235 8888887777665
No 124
>PLN02940 riboflavin kinase
Probab=94.19 E-value=0.16 Score=59.74 Aligned_cols=40 Identities=13% Similarity=0.045 Sum_probs=33.3
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEeCCCHhhHHHHHH-HcCc
Q 001008 710 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGY-ACSL 749 (1191)
Q Consensus 710 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~-~~gl 749 (1191)
++.+|+.++++.|++.|+++.++|+-....+..... ..|+
T Consensus 93 ~l~pGv~elL~~Lk~~g~~l~IvTn~~~~~~~~~l~~~~gl 133 (382)
T PLN02940 93 KALPGANRLIKHLKSHGVPMALASNSPRANIEAKISCHQGW 133 (382)
T ss_pred CCCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhccCh
Confidence 467999999999999999999999998877765543 4555
No 125
>PRK09449 dUMP phosphatase; Provisional
Probab=94.08 E-value=0.33 Score=52.50 Aligned_cols=39 Identities=18% Similarity=0.094 Sum_probs=33.0
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEeCCCHhhHHHHHHHcCc
Q 001008 710 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSL 749 (1191)
Q Consensus 710 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gl 749 (1191)
++.+|+.++++.|+ +|+++.++|+.....+...-...|+
T Consensus 95 ~~~~g~~~~L~~L~-~~~~~~i~Tn~~~~~~~~~l~~~~l 133 (224)
T PRK09449 95 TPLPGAVELLNALR-GKVKMGIITNGFTELQQVRLERTGL 133 (224)
T ss_pred ccCccHHHHHHHHH-hCCeEEEEeCCcHHHHHHHHHhCCh
Confidence 46799999999999 6899999999887777766666776
No 126
>TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II. Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related.
Probab=93.95 E-value=0.18 Score=53.35 Aligned_cols=40 Identities=15% Similarity=0.216 Sum_probs=36.1
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEeCCCHhhHHHHHHHcCc
Q 001008 710 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSL 749 (1191)
Q Consensus 710 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gl 749 (1191)
++.+|+.++++.|++.|+++.++|+-+...+..+...+|+
T Consensus 92 ~~~~~~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~gl 131 (198)
T TIGR01428 92 PPHPDVPAGLRALKERGYRLAILSNGSPAMLKSLVKHAGL 131 (198)
T ss_pred CCCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHCCC
Confidence 5789999999999999999999999888888888888887
No 127
>COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=93.81 E-value=1.1 Score=46.50 Aligned_cols=37 Identities=11% Similarity=0.160 Sum_probs=31.7
Q ss_pred CcHHHHHHHHHcCCeEEEEeCCCHhhHHHHHHHcCcc
Q 001008 714 GVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLL 750 (1191)
Q Consensus 714 ~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gl~ 750 (1191)
.+.+.+..|+++|+.|+.+|.-........-+++|+-
T Consensus 27 pA~pv~~el~d~G~~Vi~~SSKT~aE~~~l~~~l~v~ 63 (274)
T COG3769 27 PAAPVLLELKDAGVPVILCSSKTRAEMLYLQKSLGVQ 63 (274)
T ss_pred ccchHHHHHHHcCCeEEEeccchHHHHHHHHHhcCCC
Confidence 4678999999999999999998887777788888763
No 128
>PRK14988 GMP/IMP nucleotidase; Provisional
Probab=93.59 E-value=0.34 Score=52.46 Aligned_cols=41 Identities=15% Similarity=0.069 Sum_probs=35.5
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEeCCCHhhHHHHHHHcCcc
Q 001008 710 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLL 750 (1191)
Q Consensus 710 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gl~ 750 (1191)
++.+|+.++++.|++.|+++.++|+-....+...-...|+.
T Consensus 93 ~~~~g~~e~L~~Lk~~g~~~~i~Tn~~~~~~~~~l~~~~l~ 133 (224)
T PRK14988 93 VLREDTVPFLEALKASGKRRILLTNAHPHNLAVKLEHTGLD 133 (224)
T ss_pred CcCCCHHHHHHHHHhCCCeEEEEeCcCHHHHHHHHHHCCcH
Confidence 57899999999999999999999998888777766667763
No 129
>TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases.
Probab=93.54 E-value=0.37 Score=51.98 Aligned_cols=40 Identities=23% Similarity=0.318 Sum_probs=35.7
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEeCCCHhhHHHHHHHcCcc
Q 001008 710 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLL 750 (1191)
Q Consensus 710 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gl~ 750 (1191)
++.+|+.++++.|++. +++.++|+-....+..+.++.|+.
T Consensus 97 ~~~~g~~~~L~~l~~~-~~~~i~Sn~~~~~~~~~l~~~~l~ 136 (224)
T TIGR02254 97 QLLPGAFELMENLQQK-FRLYIVTNGVRETQYKRLRKSGLF 136 (224)
T ss_pred eeCccHHHHHHHHHhc-CcEEEEeCCchHHHHHHHHHCCcH
Confidence 5789999999999999 999999998888888888888874
No 130
>TIGR01990 bPGM beta-phosphoglucomutase. The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state.
Probab=93.50 E-value=0.15 Score=53.21 Aligned_cols=38 Identities=21% Similarity=0.277 Sum_probs=30.5
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEeCCCHhhHHHHHHHcCc
Q 001008 710 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSL 749 (1191)
Q Consensus 710 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gl 749 (1191)
++.||+.++|+.|+++|+++.++|+... +..+.+..|+
T Consensus 87 ~~~pg~~~~L~~L~~~g~~~~i~s~~~~--~~~~l~~~~l 124 (185)
T TIGR01990 87 DVLPGIKNLLDDLKKNNIKIALASASKN--APTVLEKLGL 124 (185)
T ss_pred ccCccHHHHHHHHHHCCCeEEEEeCCcc--HHHHHHhcCc
Confidence 6789999999999999999999997532 3445566665
No 131
>PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A ....
Probab=93.32 E-value=0.25 Score=50.60 Aligned_cols=43 Identities=19% Similarity=0.200 Sum_probs=39.6
Q ss_pred cccccCCcHHHHHHHHHcCCeEEEEeCCCHhhHHHHHHHcCcc
Q 001008 708 EDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLL 750 (1191)
Q Consensus 708 eD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gl~ 750 (1191)
..++.+|+.+.++.|++.|++++++|+-.........+..|+.
T Consensus 75 ~~~~~~~~~~~L~~l~~~~~~~~i~Sn~~~~~~~~~l~~~~~~ 117 (176)
T PF13419_consen 75 KLQPYPGVRELLERLKAKGIPLVIVSNGSRERIERVLERLGLD 117 (176)
T ss_dssp GEEESTTHHHHHHHHHHTTSEEEEEESSEHHHHHHHHHHTTHG
T ss_pred ccchhhhhhhhhhhcccccceeEEeecCCcccccccccccccc
Confidence 4578999999999999999999999999999998999999885
No 132
>TIGR01685 MDP-1 magnesium-dependent phosphatase-1. This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues.
Probab=93.29 E-value=0.38 Score=49.52 Aligned_cols=52 Identities=21% Similarity=0.195 Sum_probs=42.7
Q ss_pred cceEEEeeeecccccCCcHHHHHHHHHcCCeEEEEeCC-CHhhHHHHHHHcCc
Q 001008 698 DLILLGATAVEDKLQKGVPECIDKLAQAGIKVWVLTGD-KMETAINIGYACSL 749 (1191)
Q Consensus 698 dl~llG~~~ieD~lr~~v~~~I~~L~~aGIkv~mlTGD-~~~ta~~ia~~~gl 749 (1191)
+.......+-+-++.||+.++++.|+++|+++.++|+- ....+..+-...|+
T Consensus 33 ~~~~~~~~~~~~~l~pGv~elL~~Lk~~G~~l~I~Sn~~~~~~~~~~L~~~~l 85 (174)
T TIGR01685 33 NSIIIDKSGTEVTLIKEVRDVLQTLKDAGTYLATASWNDVPEWAYEILGTFEI 85 (174)
T ss_pred CCeEEeCCCCEEEEcccHHHHHHHHHHCCCEEEEEeCCCChHHHHHHHHhCCc
Confidence 33455555666788999999999999999999999975 88888888777776
No 133
>PLN02811 hydrolase
Probab=93.21 E-value=0.31 Score=52.66 Aligned_cols=30 Identities=23% Similarity=0.382 Sum_probs=26.6
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEeCCCHhh
Q 001008 710 KLQKGVPECIDKLAQAGIKVWVLTGDKMET 739 (1191)
Q Consensus 710 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~t 739 (1191)
++.||+.++|+.|++.|+++.++||-....
T Consensus 78 ~l~~gv~e~l~~L~~~g~~~~i~S~~~~~~ 107 (220)
T PLN02811 78 DLMPGAERLVRHLHAKGIPIAIATGSHKRH 107 (220)
T ss_pred CCCccHHHHHHHHHHCCCcEEEEeCCchhh
Confidence 577999999999999999999999876543
No 134
>TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED. HAD subfamilies caused by an overly broad single model.
Probab=93.18 E-value=0.31 Score=50.59 Aligned_cols=40 Identities=23% Similarity=0.207 Sum_probs=33.1
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEeCCCHhhHHHHHHHcCcc
Q 001008 710 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLL 750 (1191)
Q Consensus 710 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gl~ 750 (1191)
++.+|+.++++.|++.|++++++|+-.... ..+..++|+.
T Consensus 85 ~~~~g~~~~l~~l~~~g~~~~i~Tn~~~~~-~~~~~~~~l~ 124 (183)
T TIGR01509 85 KPLPGVEPLLEALRARGKKLALLTNSPRDH-AVLVQELGLR 124 (183)
T ss_pred ccCcCHHHHHHHHHHCCCeEEEEeCCchHH-HHHHHhcCCH
Confidence 578999999999999999999999987776 4454446763
No 135
>COG4359 Uncharacterized conserved protein [Function unknown]
Probab=93.17 E-value=0.29 Score=49.04 Aligned_cols=38 Identities=16% Similarity=0.247 Sum_probs=32.2
Q ss_pred hhHHHHHHHhhcCCCEEEEEcCCccChHhhhhcceeEE
Q 001008 846 KQKALVTRLVKGTGKTTLAIGDGANDVGMLQEADIGVG 883 (1191)
Q Consensus 846 ~qK~~iV~~l~~~g~~vl~iGDG~ND~~ml~~AdvGI~ 883 (1191)
.+|..+|+.++...+.+.+||||+-|++|-+.+|+-.|
T Consensus 146 ~dK~~vI~~l~e~~e~~fy~GDsvsDlsaaklsDllFA 183 (220)
T COG4359 146 HDKSSVIHELSEPNESIFYCGDSVSDLSAAKLSDLLFA 183 (220)
T ss_pred CCcchhHHHhhcCCceEEEecCCcccccHhhhhhhHhh
Confidence 47999999997777889999999999998777776664
No 136
>PLN02151 trehalose-phosphatase
Probab=93.03 E-value=2.3 Score=48.72 Aligned_cols=233 Identities=15% Similarity=0.152 Sum_probs=110.0
Q ss_pred HHHHHHHHHHHHHhhcchhhHHHHHHHHHH-----HhhccceEEEeeeeccc--ccCCcHHHHHHHHHcCCeEEEEeCCC
Q 001008 664 DEYRIWEKEFLKAKTSVTSDREALVASAAE-----KIERDLILLGATAVEDK--LQKGVPECIDKLAQAGIKVWVLTGDK 736 (1191)
Q Consensus 664 ~~~~~~~~~~~~a~~~l~~~r~~~~~~~~~-----~iE~dl~llG~~~ieD~--lr~~v~~~I~~L~~aGIkv~mlTGD~ 736 (1191)
++|..|..++-.|...+ ++.+..... .+.-|.||+-++---|. +-+++.++|+.|. ++..+.++||+.
T Consensus 71 ~~~~~w~~~~p~a~~~~----~~~~~~~~~~~~ll~lDyDGTL~PIv~~P~~A~~~~~~~~aL~~La-~~~~vaIvSGR~ 145 (354)
T PLN02151 71 NKQSCWIKEHPSALNMF----EEILHKSEGKQIVMFLDYDGTLSPIVDDPDRAFMSKKMRNTVRKLA-KCFPTAIVSGRC 145 (354)
T ss_pred hhHHHHHHhCChHHHHH----HHHHHhhcCCceEEEEecCccCCCCCCCcccccCCHHHHHHHHHHh-cCCCEEEEECCC
Confidence 57888998887776543 111111100 01223444432222222 4567788999998 567999999999
Q ss_pred HhhHHHHHHHcCc--cccCceEEEEecCCchhhhhhhhc--chHHHH---HHHHHHHHHHHHhhcccccccccccceeEE
Q 001008 737 METAINIGYACSL--LRQEMKQIVITLDSPDMEALEKQG--DKENIT---KVSLESVTKQIREGISQVNSAKESKVTFGL 809 (1191)
Q Consensus 737 ~~ta~~ia~~~gl--~~~~~~~~~i~~~~~~~~~~~~~~--~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 809 (1191)
.........-.++ ....... +...... ..+.... ...... ....+.+...+.......+...-....+++
T Consensus 146 ~~~l~~~~~~~~l~laGsHG~e--~~~p~~g-~~~~~~~~~~~~~~~~~~~~~i~~v~~~l~~~~~~~pG~~VE~K~~sl 222 (354)
T PLN02151 146 REKVSSFVKLTELYYAGSHGMD--IKGPEQG-SKYKKENQSLLCQPATEFLPVINEVYKKLVEKTKSIPGAKVENNKFCA 222 (354)
T ss_pred HHHHHHHcCCccceEEEeCCce--eecCCCC-ccccccccccccccchhhHHHHHHHHHHHHHHHhcCCCCEEEecCcEE
Confidence 9888776532222 1111110 1111000 0000000 000000 000111212221111111122222344555
Q ss_pred EEeCchhhHHhHHHHHHHHHHHHhhcC--------ceEEEcCCh---hhHHHHHHHh-hcCC------CEEEEEcCCccC
Q 001008 810 VIDGKSLDFALDKKLEKMFLDLAIDCA--------SVICCRSSP---KQKALVTRLV-KGTG------KTTLAIGDGAND 871 (1191)
Q Consensus 810 vi~G~~l~~~~~~~~~~~~~~l~~~~~--------~~v~~r~sP---~qK~~iV~~l-~~~g------~~vl~iGDG~ND 871 (1191)
.+.-.........++..++..+..... .++ .+.| .+|...|+.+ +..+ ..++++||-..|
T Consensus 223 avHYR~a~~~~~~~l~~~l~~v~~~~~~l~v~~GkkVv--EvrP~~~~dKG~Av~~Ll~~~~~~~~~~~~pvyiGDD~TD 300 (354)
T PLN02151 223 SVHFRCVEENKWSDLANQVRSVLKNYPKLMLTQGRKVL--EIRPIIKWDKGKALEFLLESLGYANCTDVFPIYIGDDRTD 300 (354)
T ss_pred EEEeCCCChHHHHHHHHHHHHHHhhCCCcEEecCCEEE--EEeCCCCCCHHHHHHHHHHhcccccCCCCeEEEEcCCCcH
Confidence 555433322111223333333332222 222 3344 4999999998 5433 258999999999
Q ss_pred hHhhhhc-----ceeEEeccCccchhhhccceeccchhhhhHh
Q 001008 872 VGMLQEA-----DIGVGISGVEGMQAVMSSDYAIAQFRFLERL 909 (1191)
Q Consensus 872 ~~ml~~A-----dvGI~i~g~e~~~a~~~aD~vl~~f~~l~~l 909 (1191)
-.|++.. ++||.++.... .-.|+|.+.+-..+..+
T Consensus 301 EDaF~~L~~~~~G~gI~Vg~~~k---~T~A~y~L~dp~eV~~~ 340 (354)
T PLN02151 301 EDAFKILRDKKQGLGILVSKYAK---ETNASYSLQEPDEVMEF 340 (354)
T ss_pred HHHHHHHhhcCCCccEEeccCCC---CCcceEeCCCHHHHHHH
Confidence 9999864 45555431111 23688999886555544
No 137
>TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase. All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509).
Probab=92.98 E-value=0.21 Score=52.17 Aligned_cols=39 Identities=21% Similarity=0.261 Sum_probs=32.8
Q ss_pred ccccCCcHHHHHHHHHcCCeEEEEeCCCHhhHHHHHHHcCc
Q 001008 709 DKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSL 749 (1191)
Q Consensus 709 D~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gl 749 (1191)
-++.||+.++++.|++.|+++.++|+. ..+..+-+..|+
T Consensus 87 ~~~~~g~~~~l~~l~~~g~~i~i~S~~--~~~~~~l~~~~l 125 (185)
T TIGR02009 87 AEVLPGIENFLKRLKKKGIAVGLGSSS--KNADRILAKLGL 125 (185)
T ss_pred CCCCcCHHHHHHHHHHcCCeEEEEeCc--hhHHHHHHHcCh
Confidence 368999999999999999999999987 556666666776
No 138
>TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668. This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family.
Probab=91.69 E-value=0.51 Score=48.62 Aligned_cols=40 Identities=18% Similarity=0.297 Sum_probs=33.4
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEeCCC-HhhHHHHHHHcCc
Q 001008 710 KLQKGVPECIDKLAQAGIKVWVLTGDK-METAINIGYACSL 749 (1191)
Q Consensus 710 ~lr~~v~~~I~~L~~aGIkv~mlTGD~-~~ta~~ia~~~gl 749 (1191)
.+-+++.++++.|++.|+++.++|+-+ ...+..+.+.+|+
T Consensus 43 ~~~pgv~e~L~~Lk~~g~~l~I~Sn~~~~~~~~~~~~~~gl 83 (170)
T TIGR01668 43 EAYPALRDWIEELKAAGRKLLIVSNNAGEQRAKAVEKALGI 83 (170)
T ss_pred CcChhHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHcCC
Confidence 578999999999999999999999987 5666666666665
No 139
>TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E. HAD subfamilies caused by an overly broad single model.
Probab=91.63 E-value=0.55 Score=47.31 Aligned_cols=40 Identities=18% Similarity=0.348 Sum_probs=33.2
Q ss_pred cccccCCcHHHHHHHHHcCCeEEEEeCCCHhhHHHHHHHc
Q 001008 708 EDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYAC 747 (1191)
Q Consensus 708 eD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~ 747 (1191)
+.+..+|+.++++.|++.|+++.++|+-....+....+..
T Consensus 62 ~~~~~~g~~e~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~ 101 (154)
T TIGR01549 62 EEAYIRGAADLLKRLKEAGIKLGIISNGSLRAQKLLLRKH 101 (154)
T ss_pred hheeccCHHHHHHHHHHCcCeEEEEeCCchHHHHHHHHHH
Confidence 4445689999999999999999999999888777665543
No 140
>smart00577 CPDc catalytic domain of ctd-like phosphatases.
Probab=91.24 E-value=0.27 Score=49.42 Aligned_cols=42 Identities=19% Similarity=0.040 Sum_probs=36.8
Q ss_pred ecccccCCcHHHHHHHHHcCCeEEEEeCCCHhhHHHHHHHcCc
Q 001008 707 VEDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSL 749 (1191)
Q Consensus 707 ieD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gl 749 (1191)
..-+++||+.+.++.|+ .++++.++|+-....+..+-+.+++
T Consensus 42 ~~v~l~pG~~e~L~~L~-~~~~l~I~Ts~~~~~~~~il~~l~~ 83 (148)
T smart00577 42 VYVKKRPGVDEFLKRAS-ELFELVVFTAGLRMYADPVLDLLDP 83 (148)
T ss_pred EEEEECCCHHHHHHHHH-hccEEEEEeCCcHHHHHHHHHHhCc
Confidence 34468999999999999 5799999999999999988887776
No 141
>TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC. No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC.
Probab=91.10 E-value=0.6 Score=45.53 Aligned_cols=39 Identities=10% Similarity=0.072 Sum_probs=32.8
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEeCC-CHhhHHHHHHHcC
Q 001008 710 KLQKGVPECIDKLAQAGIKVWVLTGD-KMETAINIGYACS 748 (1191)
Q Consensus 710 ~lr~~v~~~I~~L~~aGIkv~mlTGD-~~~ta~~ia~~~g 748 (1191)
++.+|+.++++.|+++|+++.++|+- ....+..+-+..+
T Consensus 29 ~~~~gv~e~L~~Lk~~g~~l~i~Sn~~~~~~~~~~l~~~~ 68 (128)
T TIGR01681 29 VTIKEIRDKLQTLKKNGFLLALASYNDDPHVAYELLKIFE 68 (128)
T ss_pred HHHHHHHHHHHHHHHCCeEEEEEeCCCCHHHHHHHHHhcc
Confidence 68999999999999999999999998 6666666555444
No 142
>TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase. This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812).
Probab=90.67 E-value=1.4 Score=45.55 Aligned_cols=47 Identities=19% Similarity=0.213 Sum_probs=32.4
Q ss_pred CEEEEEcCCccChHhhhhccee--EEe-ccCccch-hhhccceeccchhhh
Q 001008 860 KTTLAIGDGANDVGMLQEADIG--VGI-SGVEGMQ-AVMSSDYAIAQFRFL 906 (1191)
Q Consensus 860 ~~vl~iGDG~ND~~ml~~AdvG--I~i-~g~e~~~-a~~~aD~vl~~f~~l 906 (1191)
..++||||...|+.+=+.|++. |++ .|..... ....+|+++.++..|
T Consensus 124 ~~~v~VGDs~~Di~aA~~aG~~~~i~v~~g~~~~~~~~~~ad~~i~~~~el 174 (176)
T TIGR00213 124 AQSYMVGDKLEDMQAGVAAKVKTNVLVRTGKPITPEAENIADWVLNSLADL 174 (176)
T ss_pred hhEEEEcCCHHHHHHHHHCCCcEEEEEecCCcccccccccCCEEeccHHHh
Confidence 5688999999999999999985 344 3322111 123489988776654
No 143
>TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase. Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes.
Probab=90.61 E-value=0.81 Score=48.55 Aligned_cols=39 Identities=13% Similarity=0.110 Sum_probs=31.3
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEeCCCHhhHHHHHHHcCc
Q 001008 710 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSL 749 (1191)
Q Consensus 710 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gl 749 (1191)
++-||+.++++.|++.|+++.++|+-... +......+|+
T Consensus 105 ~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~-~~~~l~~~~l 143 (203)
T TIGR02252 105 QVYPDAIKLLKDLRERGLILGVISNFDSR-LRGLLEALGL 143 (203)
T ss_pred eeCcCHHHHHHHHHHCCCEEEEEeCCchh-HHHHHHHCCc
Confidence 67899999999999999999999985543 3555556665
No 144
>TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family. which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles.
Probab=89.58 E-value=1.5 Score=48.46 Aligned_cols=42 Identities=10% Similarity=0.192 Sum_probs=31.9
Q ss_pred cccccCCcHHHHHHHHHcCCeEEEEeCCCHhhH---HHHHHHcCc
Q 001008 708 EDKLQKGVPECIDKLAQAGIKVWVLTGDKMETA---INIGYACSL 749 (1191)
Q Consensus 708 eD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta---~~ia~~~gl 749 (1191)
..++-||+.+.++.|++.|+++.++|+...... ...-+..|+
T Consensus 116 ~a~~ipGA~e~L~~L~~~G~~v~iVTnR~~~~~~~T~~~Lkk~Gi 160 (266)
T TIGR01533 116 QAKPVAGALDFLNYANSKGVKIFYVSNRSEKEKAATLKNLKRFGF 160 (266)
T ss_pred CCCcCccHHHHHHHHHHCCCeEEEEeCCCcchHHHHHHHHHHcCc
Confidence 345679999999999999999999999874433 333444565
No 145
>PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 []. It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity
Probab=89.45 E-value=1.4 Score=47.47 Aligned_cols=41 Identities=17% Similarity=0.163 Sum_probs=35.0
Q ss_pred cccCCcHHHHHHH--HHcCCeEEEEeCCCHhhHHHHHHHcCcc
Q 001008 710 KLQKGVPECIDKL--AQAGIKVWVLTGDKMETAINIGYACSLL 750 (1191)
Q Consensus 710 ~lr~~v~~~I~~L--~~aGIkv~mlTGD~~~ta~~ia~~~gl~ 750 (1191)
|+.++.+++++.+ ++.|+.+.++|--+..--..+-+.-|+-
T Consensus 71 p~~pgm~~~l~~l~~~~~~~~~~IiSDaNs~fI~~iL~~~gl~ 113 (234)
T PF06888_consen 71 PIDPGMKELLRFLAKNQRGFDLIIISDANSFFIETILEHHGLR 113 (234)
T ss_pred CCCccHHHHHHHHHhcCCCceEEEEeCCcHhHHHHHHHhCCCc
Confidence 5779999999999 5689999999999888777777777774
No 146
>TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain. This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3.
Probab=89.30 E-value=0.78 Score=45.97 Aligned_cols=27 Identities=30% Similarity=0.393 Sum_probs=24.9
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEeCCC
Q 001008 710 KLQKGVPECIDKLAQAGIKVWVLTGDK 736 (1191)
Q Consensus 710 ~lr~~v~~~I~~L~~aGIkv~mlTGD~ 736 (1191)
++.||+.++++.|++.|+++.++|+..
T Consensus 27 ~~~~g~~~~l~~Lk~~g~~~~I~Sn~~ 53 (147)
T TIGR01656 27 QLRPGAVPALLTLRAAGYTVVVVTNQS 53 (147)
T ss_pred EEcCChHHHHHHHHHCCCEEEEEeCCC
Confidence 478999999999999999999999865
No 147
>PF02358 Trehalose_PPase: Trehalose-phosphatase; InterPro: IPR003337 Trehalose-phosphatases 3.1.3.12 from EC catalyse the de-phosphorylation of trehalose-6-phosphate to trehalose and orthophosphate. Trehalose is a common disaccharide of bacteria, fungi and invertebrates that appears to play a major role in desiccation tolerance. A pathway for trehalose biosynthesis may also exist in plants []. The trehalose-phosphatase signature is found in the C terminus of trehalose-6-phosphate synthase 2.4.1.15 from EC adjacent to the trehalose-6-phosphate synthase domain (see IPR001830 from INTERPRO). It would appear that the two equivalent genes in the Escherichia coli otsBA operon: otsA, the trehalose-6-phosphate synthase and otsB, trehalose-phosphatase (this family) have undergone gene fusion in most eukaryotes [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1U02_A.
Probab=88.34 E-value=2 Score=46.91 Aligned_cols=186 Identities=13% Similarity=0.120 Sum_probs=71.6
Q ss_pred cccCCcHHHHHHHHHc-CCeEEEEeCCCHhhHHHHHHH--cCccccCceEEEEecCCchhhhhhhhcchHHHHHHHHHHH
Q 001008 710 KLQKGVPECIDKLAQA-GIKVWVLTGDKMETAINIGYA--CSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESV 786 (1191)
Q Consensus 710 ~lr~~v~~~I~~L~~a-GIkv~mlTGD~~~ta~~ia~~--~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 786 (1191)
.+-+++.++++.|.+. +..|+++||+..........- ++++.++...+...+....... ..... ....+.+
T Consensus 19 ~~~~~~~~~L~~La~~~~~~v~IvSGR~~~~~~~~~~~~~i~l~gehG~e~~~~~~~~~~~~-~~~~~-----~~~~~~~ 92 (235)
T PF02358_consen 19 VPPPELRELLRALAADPNNTVAIVSGRSLDDLERFGGIPNIGLAGEHGAEIRRPGGSEWTNL-PADED-----LEWKDEV 92 (235)
T ss_dssp ---HHHHHHHHHHHHHSE--EEEE-SS-HHHHHHH-S-SS-EEEEGGGTEEEETTE-EEE-T-TGGGG-----HHHHHHH
T ss_pred CCCHHHHHHHHHHhccCCCEEEEEEeCCHHHhHHhcCCCCceEEEEeeEEeccCcccccccc-ccccc-----hHHHHHH
Confidence 3456788888888765 458999999998885554322 2333333322222222110000 00000 0111122
Q ss_pred HHHHHhhcccccccccccceeEEEEeCchhhHH----hHHHHHHHHHHHHhh--------cCceEEEcCChhhHHHHHHH
Q 001008 787 TKQIREGISQVNSAKESKVTFGLVIDGKSLDFA----LDKKLEKMFLDLAID--------CASVICCRSSPKQKALVTRL 854 (1191)
Q Consensus 787 ~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~----~~~~~~~~~~~l~~~--------~~~~v~~r~sP~qK~~iV~~ 854 (1191)
...+.......+...-.....++.+.-.....- ...++.+.+.++... -+.+|=.|..-..|...|+.
T Consensus 93 ~~~l~~~~~~~pG~~iE~K~~sv~~Hyr~~~~~~~~~~~~~l~~~l~~~~~~~~~~~v~~g~~~vEvrp~~~~KG~av~~ 172 (235)
T PF02358_consen 93 REILEYFAERTPGSFIEDKEFSVAFHYRNAPPEFGEAQARELAEQLREILASHPGLEVVPGKKVVEVRPPGVNKGSAVRR 172 (235)
T ss_dssp HHHHTTHHHHSTT-EEEEETTEEEEE-TTS-ST----THHHHHHHHHHHHHHH-T-EEEE-SSEEEEE-TT--HHHHHHH
T ss_pred HHHHHHHHhhccCcEEEECCeEEEEEecCCCcchhhhHHHHHHHHHHHHHHhCCCEEEEECCCEEEEEeCCCChHHHHHH
Confidence 222211111111111112333444443222111 122333333332221 23344445555569999998
Q ss_pred h-hcCC------CEEEEEcCCccChHhhhhc------ceeEEeccCccchhhhccceecc
Q 001008 855 V-KGTG------KTTLAIGDGANDVGMLQEA------DIGVGISGVEGMQAVMSSDYAIA 901 (1191)
Q Consensus 855 l-~~~g------~~vl~iGDG~ND~~ml~~A------dvGI~i~g~e~~~a~~~aD~vl~ 901 (1191)
+ +..+ ..++++||...|-.|++.. ++||-+...+......+|+|-+.
T Consensus 173 ll~~~~~~~~~~~~~l~~GDD~tDE~~f~~~~~~~~~~~~i~V~~~~~~~~~t~A~y~l~ 232 (235)
T PF02358_consen 173 LLEELPFAGPKPDFVLYIGDDRTDEDAFRALRELEEGGFGIKVGSVSVGEKPTAASYRLD 232 (235)
T ss_dssp HHTTS---------EEEEESSHHHHHHHHTTTTS----EEEEES----------------
T ss_pred HHHhcCccccccceeEEecCCCCCHHHHHHHHhcccCCCCeEEEeecccccccccccccc
Confidence 8 5554 3799999999999999875 44554433332212355666554
No 148
>TIGR01261 hisB_Nterm histidinol-phosphatase. This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis.
Probab=87.80 E-value=1.4 Score=44.78 Aligned_cols=26 Identities=35% Similarity=0.517 Sum_probs=23.6
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEeCC
Q 001008 710 KLQKGVPECIDKLAQAGIKVWVLTGD 735 (1191)
Q Consensus 710 ~lr~~v~~~I~~L~~aGIkv~mlTGD 735 (1191)
++-+|+.++++.|+++|+++.++|.-
T Consensus 29 ~~~pgv~e~L~~L~~~g~~l~IvSN~ 54 (161)
T TIGR01261 29 RFEKGVIPALLKLKKAGYKFVMVTNQ 54 (161)
T ss_pred eECCCHHHHHHHHHHCCCeEEEEeCC
Confidence 46689999999999999999999974
No 149
>TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase. These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA.
Probab=86.73 E-value=1.2 Score=47.65 Aligned_cols=29 Identities=24% Similarity=0.288 Sum_probs=25.6
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEeCCCHh
Q 001008 710 KLQKGVPECIDKLAQAGIKVWVLTGDKME 738 (1191)
Q Consensus 710 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ 738 (1191)
++.|++.++++.|++.|+++.++|+....
T Consensus 94 ~~~~~~~~~L~~L~~~g~~l~i~Sn~~~~ 122 (211)
T TIGR02247 94 KLRPSMMAAIKTLRAKGFKTACITNNFPT 122 (211)
T ss_pred ccChhHHHHHHHHHHCCCeEEEEeCCCCc
Confidence 56899999999999999999999986543
No 150
>PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional
Probab=85.38 E-value=2.8 Score=48.35 Aligned_cols=26 Identities=31% Similarity=0.391 Sum_probs=24.2
Q ss_pred ccccCCcHHHHHHHHHcCCeEEEEeC
Q 001008 709 DKLQKGVPECIDKLAQAGIKVWVLTG 734 (1191)
Q Consensus 709 D~lr~~v~~~I~~L~~aGIkv~mlTG 734 (1191)
=++.|++.++++.|+++|+++.++|+
T Consensus 29 ~~l~pGV~e~L~~Lk~~G~kL~IvTN 54 (354)
T PRK05446 29 LAFEPGVIPALLKLQKAGYKLVMVTN 54 (354)
T ss_pred ceECcCHHHHHHHHHhCCCeEEEEEC
Confidence 36789999999999999999999998
No 151
>PLN02177 glycerol-3-phosphate acyltransferase
Probab=85.23 E-value=7.6 Score=47.06 Aligned_cols=77 Identities=14% Similarity=0.223 Sum_probs=51.8
Q ss_pred hhhHHHHHHHhhcCCCEEEEEcCCccChHhhhhcceeEEeccCccchhhhccceeccchhhhhHhhhhhchhhhhHhhHh
Q 001008 845 PKQKALVTRLVKGTGKTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAIAQFRFLERLLLVHGHWCYRRISMM 924 (1191)
Q Consensus 845 P~qK~~iV~~l~~~g~~vl~iGDG~ND~~ml~~AdvGI~i~g~e~~~a~~~aD~vl~~f~~l~~lll~~GR~~~~~i~~~ 924 (1191)
-++|..-++..........+.||+.||.+||+.|+-+..+..+.. + .+...+....+++..||..++=.-..
T Consensus 174 Ge~Kv~rl~~~~g~~~~~~aYgDS~sD~plL~~a~e~y~V~~~~~-~-------~~~~~~~~~~~~fhdgrl~~~p~~~~ 245 (497)
T PLN02177 174 GDHKRDAVLKEFGDALPDLGLGDRETDHDFMSICKEGYMVPRTKC-E-------PLPRNKLLSPVIFHEGRLVQRPTPLV 245 (497)
T ss_pred cHHHHHHHHHHhCCCCceEEEECCccHHHHHHhCCccEEeCCCCC-C-------cCCcccCCCceeeeCCcccCCCCHHH
Confidence 456766665432111223799999999999999999998854221 1 14556778888899999998766544
Q ss_pred HHHHH
Q 001008 925 ICYFF 929 (1191)
Q Consensus 925 i~~~~ 929 (1191)
.+..+
T Consensus 246 ~l~~~ 250 (497)
T PLN02177 246 ALLTF 250 (497)
T ss_pred HHHHH
Confidence 44443
No 152
>PLN02919 haloacid dehalogenase-like hydrolase family protein
Probab=84.47 E-value=4.3 Score=54.21 Aligned_cols=41 Identities=22% Similarity=0.041 Sum_probs=36.3
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEeCCCHhhHHHHHHHcCcc
Q 001008 710 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLL 750 (1191)
Q Consensus 710 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gl~ 750 (1191)
.+-+|+.+.++.|+++|+++.++|+-....+..+-+..|+.
T Consensus 161 ~~~pG~~elL~~Lk~~G~~l~IvSn~~~~~~~~~L~~~gl~ 201 (1057)
T PLN02919 161 IGFPGALELITQCKNKGLKVAVASSADRIKVDANLAAAGLP 201 (1057)
T ss_pred ccCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHcCCC
Confidence 36799999999999999999999999888888777778873
No 153
>TIGR01664 DNA-3'-Pase DNA 3'-phosphatase. The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region.
Probab=84.39 E-value=3.5 Score=42.18 Aligned_cols=27 Identities=22% Similarity=0.413 Sum_probs=23.6
Q ss_pred ccCCcHHHHHHHHHcCCeEEEEeCCCH
Q 001008 711 LQKGVPECIDKLAQAGIKVWVLTGDKM 737 (1191)
Q Consensus 711 lr~~v~~~I~~L~~aGIkv~mlTGD~~ 737 (1191)
+-+|+.++++.|+++|+++.++|.-..
T Consensus 43 ~~pgv~e~L~~Lk~~G~~l~I~TN~~~ 69 (166)
T TIGR01664 43 LYPEIPAKLQELDDEGYKIVIFTNQSG 69 (166)
T ss_pred ecCCHHHHHHHHHHCCCEEEEEeCCcc
Confidence 349999999999999999999997543
No 154
>TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities.
Probab=83.50 E-value=4 Score=43.88 Aligned_cols=39 Identities=15% Similarity=0.203 Sum_probs=32.2
Q ss_pred cccccCCcHHHHHHHHHcCCeEEEEeCCCHhhHHHHHHH
Q 001008 708 EDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYA 746 (1191)
Q Consensus 708 eD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~ 746 (1191)
+-++.+|+.++++.|+++|+++.++|..+......+-..
T Consensus 93 ~~~lypgv~e~L~~Lk~~G~~l~I~Sn~s~~~~~~~~~~ 131 (220)
T TIGR01691 93 TSHLYPDVPPALEAWLQLGLRLAVYSSGSVPAQKLLFGH 131 (220)
T ss_pred ccCcCcCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHhh
Confidence 347899999999999999999999999877665555433
No 155
>PRK10563 6-phosphogluconate phosphatase; Provisional
Probab=82.78 E-value=2.5 Score=45.47 Aligned_cols=37 Identities=5% Similarity=0.097 Sum_probs=29.8
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEeCCCHhhHHHHHHHcCc
Q 001008 710 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSL 749 (1191)
Q Consensus 710 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gl 749 (1191)
++.+|++++++.| ++++.++|+.....+...-+..|+
T Consensus 88 ~~~~gv~~~L~~L---~~~~~ivTn~~~~~~~~~l~~~~l 124 (221)
T PRK10563 88 EPIAGANALLESI---TVPMCVVSNGPVSKMQHSLGKTGM 124 (221)
T ss_pred CcCCCHHHHHHHc---CCCEEEEeCCcHHHHHHHHHhcCh
Confidence 4568999999998 499999999887777666666666
No 156
>PRK09456 ?-D-glucose-1-phosphatase; Provisional
Probab=82.33 E-value=2.8 Score=44.38 Aligned_cols=30 Identities=27% Similarity=0.308 Sum_probs=26.3
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEeCCCHhh
Q 001008 710 KLQKGVPECIDKLAQAGIKVWVLTGDKMET 739 (1191)
Q Consensus 710 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~t 739 (1191)
++.+|+.++++.|+++|+++.++|.-+...
T Consensus 84 ~~~~g~~e~L~~l~~~g~~~~i~Sn~~~~~ 113 (199)
T PRK09456 84 ALRPEVIAIMHKLREQGHRVVVLSNTNRLH 113 (199)
T ss_pred ccCHHHHHHHHHHHhCCCcEEEEcCCchhh
Confidence 468999999999999999999999966543
No 157
>TIGR01675 plant-AP plant acid phosphatase. This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases.
Probab=82.19 E-value=4.4 Score=43.50 Aligned_cols=30 Identities=23% Similarity=0.292 Sum_probs=26.9
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEeCCCHhh
Q 001008 710 KLQKGVPECIDKLAQAGIKVWVLTGDKMET 739 (1191)
Q Consensus 710 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~t 739 (1191)
+.-+++.++++.|++.|++|+++||+....
T Consensus 120 paip~al~l~~~l~~~G~~Vf~lTGR~e~~ 149 (229)
T TIGR01675 120 PALPEGLKLYQKIIELGIKIFLLSGRWEEL 149 (229)
T ss_pred CCCHHHHHHHHHHHHCCCEEEEEcCCChHH
Confidence 566899999999999999999999998654
No 158
>PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A ....
Probab=82.18 E-value=1.4 Score=40.86 Aligned_cols=47 Identities=19% Similarity=0.218 Sum_probs=36.1
Q ss_pred EeeeecccccCCcHHHHHHHHHcCCeEEEEeCCCHhhHHHHH---HHcCc
Q 001008 703 GATAVEDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIG---YACSL 749 (1191)
Q Consensus 703 G~~~ieD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia---~~~gl 749 (1191)
|++.-.+++=||+.++|+.|+++|++++++|.....+...++ +++|+
T Consensus 7 Gvl~~g~~~ipga~e~l~~L~~~g~~~~~lTNns~~s~~~~~~~L~~~Gi 56 (101)
T PF13344_consen 7 GVLYNGNEPIPGAVEALDALRERGKPVVFLTNNSSRSREEYAKKLKKLGI 56 (101)
T ss_dssp TTSEETTEE-TTHHHHHHHHHHTTSEEEEEES-SSS-HHHHHHHHHHTTT
T ss_pred cEeEeCCCcCcCHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHHHhcCc
Confidence 666678889999999999999999999999998766654444 55666
No 159
>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)
Probab=82.02 E-value=5.8 Score=43.46 Aligned_cols=47 Identities=11% Similarity=0.154 Sum_probs=36.6
Q ss_pred EeeeecccccCCcHHHHHHHHHcCCeEEEEeCCCHhhHH--HHHHHcCc
Q 001008 703 GATAVEDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAI--NIGYACSL 749 (1191)
Q Consensus 703 G~~~ieD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~--~ia~~~gl 749 (1191)
|.+.-.+++-|++.++++.|+++|+++.++|.-....+. ...++.|+
T Consensus 17 G~l~~~~~~~pga~e~L~~L~~~G~~~~ivTN~~~~~~~~~~~L~~~gl 65 (242)
T TIGR01459 17 GVIIDGNHTYPGAVQNLNKIIAQGKPVYFVSNSPRNIFSLHKTLKSLGI 65 (242)
T ss_pred cccccCCccCccHHHHHHHHHHCCCEEEEEeCCCCChHHHHHHHHHCCC
Confidence 555566788999999999999999999999995544333 44566676
No 160
>PF08235 LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 This domain is found in Saccharomyces cerevisiae (Baker's yeast) protein SMP2, proteins with an N-terminal lipin domain (IPR007651 from INTERPRO) and phosphatidylinositol transfer proteins []. SMP2 is involved in plasmid maintenance and respiration []. Lipin proteins are involved in adipose tissue development and insulin resistance [].
Probab=81.81 E-value=5.7 Score=39.88 Aligned_cols=33 Identities=30% Similarity=0.359 Sum_probs=30.1
Q ss_pred ccccCCcHHHHHHHHHcCCeEEEEeCCCHhhHH
Q 001008 709 DKLQKGVPECIDKLAQAGIKVWVLTGDKMETAI 741 (1191)
Q Consensus 709 D~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~ 741 (1191)
|..++|+.+....+++.|++++.+|++..-.|.
T Consensus 26 d~~h~g~~~l~~~i~~~GY~ilYlTaRp~~qa~ 58 (157)
T PF08235_consen 26 DWTHPGAAELYRKIADNGYKILYLTARPIGQAN 58 (157)
T ss_pred hhhhhcHHHHHHHHHHCCeEEEEECcCcHHHHH
Confidence 799999999999999999999999999876553
No 161
>COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=81.60 E-value=4.9 Score=52.88 Aligned_cols=24 Identities=13% Similarity=0.079 Sum_probs=19.9
Q ss_pred CCeEEEEeccccccccEEEEeCCC
Q 001008 146 DHTFVETKWKNLRVGDLVKVHKDE 169 (1191)
Q Consensus 146 ~g~~~~i~~~~L~vGDIV~l~~ge 169 (1191)
-|..+.+...|.+|-|...++..+
T Consensus 160 pGDiV~l~~gd~vPAD~rLl~~~~ 183 (917)
T COG0474 160 PGDIVLLEAGDVVPADLRLLESSD 183 (917)
T ss_pred CCcEEEECCCCccccceEEEEecC
Confidence 578888888888888888888776
No 162
>TIGR01686 FkbH FkbH-like domain. The C-terminal portion of this domain is unique to this family (by BLAST).
Probab=81.54 E-value=2.6 Score=48.35 Aligned_cols=37 Identities=19% Similarity=0.204 Sum_probs=32.7
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEeCCCHhhHHHHHHH
Q 001008 710 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYA 746 (1191)
Q Consensus 710 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~ 746 (1191)
++-+++.++|+.|++.|+++.++|.-+...|..+-+.
T Consensus 31 ~~~~~~~e~L~~L~~~Gi~lai~S~n~~~~a~~~l~~ 67 (320)
T TIGR01686 31 PLHKTLQEKIKTLKKQGFLLALASKNDEDDAKKVFER 67 (320)
T ss_pred ccHHHHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHh
Confidence 4568999999999999999999999998888877765
No 163
>COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only]
Probab=78.73 E-value=5.7 Score=39.81 Aligned_cols=40 Identities=20% Similarity=0.262 Sum_probs=35.7
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEeCCCHhhHHHHHHHcCc
Q 001008 710 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSL 749 (1191)
Q Consensus 710 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gl 749 (1191)
..-|++.+-++.++.+|+++.++|.-+...+...+..+|+
T Consensus 46 ~~tpe~~~W~~e~k~~gi~v~vvSNn~e~RV~~~~~~l~v 85 (175)
T COG2179 46 DATPELRAWLAELKEAGIKVVVVSNNKESRVARAAEKLGV 85 (175)
T ss_pred CCCHHHHHHHHHHHhcCCEEEEEeCCCHHHHHhhhhhcCC
Confidence 4567788889999999999999999999999999998887
No 164
>PHA02597 30.2 hypothetical protein; Provisional
Probab=77.23 E-value=7 Score=41.15 Aligned_cols=34 Identities=18% Similarity=0.186 Sum_probs=25.0
Q ss_pred HHHHHHh-hcCC-CEEEEEcCCccChHhhhhc--ceeE
Q 001008 849 ALVTRLV-KGTG-KTTLAIGDGANDVGMLQEA--DIGV 882 (1191)
Q Consensus 849 ~~iV~~l-~~~g-~~vl~iGDG~ND~~ml~~A--dvGI 882 (1191)
..++... +..| ..+++|||..+|+.+-++| ++-.
T Consensus 133 p~~~~~a~~~~~~~~~v~vgDs~~di~aA~~a~~Gi~~ 170 (197)
T PHA02597 133 EKLFIKAKEKYGDRVVCFVDDLAHNLDAAHEALSQLPV 170 (197)
T ss_pred HHHHHHHHHHhCCCcEEEeCCCHHHHHHHHHHHcCCcE
Confidence 3444443 4444 4588999999999999999 8865
No 165
>COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism]
Probab=77.02 E-value=10 Score=39.14 Aligned_cols=47 Identities=19% Similarity=0.467 Sum_probs=33.4
Q ss_pred ceEEEcCChhh--------HHHHHHHhhcCC---CEEEEEcCCccChHhhhhcceeEEe
Q 001008 837 SVICCRSSPKQ--------KALVTRLVKGTG---KTTLAIGDGANDVGMLQEADIGVGI 884 (1191)
Q Consensus 837 ~~v~~r~sP~q--------K~~iV~~l~~~g---~~vl~iGDG~ND~~ml~~AdvGI~i 884 (1191)
.+.+|.-.|++ ...+.+.+++.+ ....+|||-..|..+-..|+++ ++
T Consensus 89 ~i~~Cph~p~~~c~cRKP~~gm~~~~~~~~~iD~~~s~~VGD~~~Dlq~a~n~gi~-~~ 146 (181)
T COG0241 89 GILYCPHHPEDNCDCRKPKPGMLLSALKEYNIDLSRSYVVGDRLTDLQAAENAGIK-GV 146 (181)
T ss_pred eEEECCCCCCCCCcccCCChHHHHHHHHHhCCCccceEEecCcHHHHHHHHHCCCC-ce
Confidence 34566655653 355666666555 6789999999999988888887 44
No 166
>PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases. All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family.
Probab=72.81 E-value=11 Score=38.35 Aligned_cols=43 Identities=19% Similarity=0.229 Sum_probs=35.5
Q ss_pred ecccccCCcHHHHHHHHHcCC--eEEEEeCC-------CHhhHHHHHHHcCc
Q 001008 707 VEDKLQKGVPECIDKLAQAGI--KVWVLTGD-------KMETAINIGYACSL 749 (1191)
Q Consensus 707 ieD~lr~~v~~~I~~L~~aGI--kv~mlTGD-------~~~ta~~ia~~~gl 749 (1191)
=++.+-+++.+.+++|++.+. +|+++|.- ....|..+++.+|+
T Consensus 56 ~~~~i~~~~~~~~~~l~~~~~~~~v~IvSNsaGs~~d~~~~~a~~~~~~lgI 107 (168)
T PF09419_consen 56 YEDEIPPEYAEWLNELKKQFGKDRVLIVSNSAGSSDDPDGERAEALEKALGI 107 (168)
T ss_pred CcCcCCHHHHHHHHHHHHHCCCCeEEEEECCCCcccCccHHHHHHHHHhhCC
Confidence 357788999999999999987 49999985 36778888888886
No 167
>COG1877 OtsB Trehalose-6-phosphatase [Carbohydrate transport and metabolism]
Probab=70.73 E-value=97 Score=34.27 Aligned_cols=167 Identities=9% Similarity=0.045 Sum_probs=85.7
Q ss_pred eecccccCCcHHHHHHHHHc-CCeEEEEeCCCHhhHHHHHHH--cCccccCceEE-EEecCCchhhhhhhhcchHHHHHH
Q 001008 706 AVEDKLQKGVPECIDKLAQA-GIKVWVLTGDKMETAINIGYA--CSLLRQEMKQI-VITLDSPDMEALEKQGDKENITKV 781 (1191)
Q Consensus 706 ~ieD~lr~~v~~~I~~L~~a-GIkv~mlTGD~~~ta~~ia~~--~gl~~~~~~~~-~i~~~~~~~~~~~~~~~~~~~~~~ 781 (1191)
-....+-++..+.++.|... ..-+||+||++.+-......- +|++..+...+ .+++...... ...+.+ .
T Consensus 36 p~~a~~~~~l~~lL~~Las~~~~~v~iiSGR~~~~l~~~~~v~~i~l~aehGa~~r~~~g~~~~~~-----~~~~~~--~ 108 (266)
T COG1877 36 PEAAVPDDRLLSLLQDLASDPRNVVAIISGRSLAELERLFGVPGIGLIAEHGAEVRDPNGKWWINL-----AEEADL--R 108 (266)
T ss_pred ccccCCCHHHHHHHHHHHhcCCCeEEEEeCCCHHHHHHhcCCCCccEEEecceEEecCCCCeeEec-----CHHHHh--h
Confidence 34455667788888888866 567999999999877766542 33444433333 2333221100 001111 1
Q ss_pred HHHHHHHHHHhhcccccccccccceeEEEEeCchhhHHhHH--HHHHHHHHH------HhhcCceEEEcCChhhHHHHHH
Q 001008 782 SLESVTKQIREGISQVNSAKESKVTFGLVIDGKSLDFALDK--KLEKMFLDL------AIDCASVICCRSSPKQKALVTR 853 (1191)
Q Consensus 782 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~--~~~~~~~~l------~~~~~~~v~~r~sP~qK~~iV~ 853 (1191)
+.+.+...+.......+...-..+..++.+.-.....-... .+.+..... ...-+.+|-+|.+-..|+..++
T Consensus 109 ~~~~v~~~l~~~v~r~pGs~iE~K~~a~~~Hyr~a~~~~~~~~a~~~~~~~~~~~~~~v~~gk~vVEvrp~~~~KG~a~~ 188 (266)
T COG1877 109 WLKEVAAILEYYVERTPGSYIERKGFAVALHYRNAEDDEGAALALAEAATLINELKLRVTPGKMVVELRPPGVSKGAAIK 188 (266)
T ss_pred HHHHHHHHHHHHhhcCCCeEEEEcCcEEEEeeccCCchhhHHHHHHHHHhccccccEEEEeCceEEEEeeCCcchHHHHH
Confidence 11222233322222332222122223333321111100000 011111100 1123557888888888999999
Q ss_pred Hh-hcCC---CEEEEEcCCccChHhhhhcc
Q 001008 854 LV-KGTG---KTTLAIGDGANDVGMLQEAD 879 (1191)
Q Consensus 854 ~l-~~~g---~~vl~iGDG~ND~~ml~~Ad 879 (1191)
.+ +..+ ..+++.||-..|-.|++..+
T Consensus 189 ~i~~~~~~~~~~~~~aGDD~TDE~~F~~v~ 218 (266)
T COG1877 189 YIMDELPFDGRFPIFAGDDLTDEDAFAAVN 218 (266)
T ss_pred HHHhcCCCCCCcceecCCCCccHHHHHhhc
Confidence 87 5543 35899999999999999988
No 168
>PRK10444 UMP phosphatase; Provisional
Probab=70.24 E-value=4.7 Score=44.33 Aligned_cols=45 Identities=16% Similarity=0.282 Sum_probs=39.8
Q ss_pred EeeeecccccCCcHHHHHHHHHcCCeEEEEeCCCHhhHHHHHHHc
Q 001008 703 GATAVEDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYAC 747 (1191)
Q Consensus 703 G~~~ieD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~ 747 (1191)
|++.-.+.+-|++.++|+.|+++|++++++||....+...+++++
T Consensus 10 GtL~~~~~~~p~a~~~l~~L~~~g~~~~~~Tn~~~~~~~~~~~~l 54 (248)
T PRK10444 10 GVLMHDNVAVPGAAEFLHRILDKGLPLVLLTNYPSQTGQDLANRF 54 (248)
T ss_pred CceEeCCeeCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHH
Confidence 666667788999999999999999999999999998888877774
No 169
>KOG3120 consensus Predicted haloacid dehalogenase-like hydrolase [General function prediction only]
Probab=69.43 E-value=30 Score=36.47 Aligned_cols=40 Identities=15% Similarity=0.153 Sum_probs=31.3
Q ss_pred cccCCcHHHHHHHHHcCC-eEEEEeCCCHhhHHHHHHHcCc
Q 001008 710 KLQKGVPECIDKLAQAGI-KVWVLTGDKMETAINIGYACSL 749 (1191)
Q Consensus 710 ~lr~~v~~~I~~L~~aGI-kv~mlTGD~~~ta~~ia~~~gl 749 (1191)
|+-|++.++|+.+++.|- .++++|--|.--...+-+..|+
T Consensus 84 P~~Pgmv~lik~~ak~g~~eliIVSDaNsfFIe~~Lea~~~ 124 (256)
T KOG3120|consen 84 PIVPGMVRLIKSAAKLGCFELIIVSDANSFFIEEILEAAGI 124 (256)
T ss_pred CCCccHHHHHHHHHhCCCceEEEEecCchhHHHHHHHHccH
Confidence 567999999999999986 8888888776655555555555
No 170
>PLN02645 phosphoglycolate phosphatase
Probab=68.90 E-value=7.2 Score=44.49 Aligned_cols=48 Identities=31% Similarity=0.421 Sum_probs=40.4
Q ss_pred EeeeecccccCCcHHHHHHHHHcCCeEEEEeCCCHhhHHHHH---HHcCcc
Q 001008 703 GATAVEDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIG---YACSLL 750 (1191)
Q Consensus 703 G~~~ieD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia---~~~gl~ 750 (1191)
|++.-.+.+=+++.++|+.|++.|++++++|+....+...++ +++|+-
T Consensus 37 Gtl~~~~~~~~ga~e~l~~lr~~g~~~~~~TN~~~~~~~~~~~~l~~lGi~ 87 (311)
T PLN02645 37 GVIWKGDKLIEGVPETLDMLRSMGKKLVFVTNNSTKSRAQYGKKFESLGLN 87 (311)
T ss_pred CCeEeCCccCcCHHHHHHHHHHCCCEEEEEeCCCCCCHHHHHHHHHHCCCC
Confidence 666666778899999999999999999999999977777766 567763
No 171
>PF03767 Acid_phosphat_B: HAD superfamily, subfamily IIIB (Acid phosphatase); InterPro: IPR005519 This family of class B acid phosphatases also contains a number of vegetative storage proteins (VPS25). The acid phosphatase activity of VPS has been experimentally demonstrated [].; GO: 0003993 acid phosphatase activity; PDB: 3PCT_C 2I34_A 2I33_A 1Z5U_D 1Z5G_A 2AUT_C 1Z88_B 3OCV_A 3OCZ_A 3OCX_A ....
Probab=68.33 E-value=14 Score=40.10 Aligned_cols=30 Identities=23% Similarity=0.316 Sum_probs=26.5
Q ss_pred ccccCCcHHHHHHHHHcCCeEEEEeCCCHh
Q 001008 709 DKLQKGVPECIDKLAQAGIKVWVLTGDKME 738 (1191)
Q Consensus 709 D~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ 738 (1191)
++.=|++.+.++.+++.|++|..+||++..
T Consensus 114 ~~aip~a~~l~~~~~~~G~~V~~iT~R~~~ 143 (229)
T PF03767_consen 114 APAIPGALELYNYARSRGVKVFFITGRPES 143 (229)
T ss_dssp GEEETTHHHHHHHHHHTTEEEEEEEEEETT
T ss_pred CcccHHHHHHHHHHHHCCCeEEEEecCCch
Confidence 466689999999999999999999998754
No 172
>TIGR01684 viral_ppase viral phosphatase. These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade.
Probab=68.31 E-value=7 Score=43.35 Aligned_cols=41 Identities=10% Similarity=0.148 Sum_probs=37.4
Q ss_pred cc-CCcHHHHHHHHHcCCeEEEEeCCCHhhHHHHHHHcCccc
Q 001008 711 LQ-KGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLR 751 (1191)
Q Consensus 711 lr-~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gl~~ 751 (1191)
+| |++.++++.|+++|+++.++|+-..+.+...-+++||..
T Consensus 146 irdPgV~EaL~~LkekGikLaIaTS~~Re~v~~~L~~lGLd~ 187 (301)
T TIGR01684 146 IRDPRIYDSLTELKKRGCILVLWSYGDRDHVVESMRKVKLDR 187 (301)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHcCCCc
Confidence 55 999999999999999999999989898989999999953
No 173
>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458. This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.
Probab=67.90 E-value=7.9 Score=42.83 Aligned_cols=47 Identities=21% Similarity=0.282 Sum_probs=36.5
Q ss_pred Eeeeeccc----ccCCcHHHHHHHHHcCCeEEEEeCCCHhh---HHHHHHHcCc
Q 001008 703 GATAVEDK----LQKGVPECIDKLAQAGIKVWVLTGDKMET---AINIGYACSL 749 (1191)
Q Consensus 703 G~~~ieD~----lr~~v~~~I~~L~~aGIkv~mlTGD~~~t---a~~ia~~~gl 749 (1191)
|++.-.+. +=|++.++|+.|+++|++++++||.+..+ ......++|+
T Consensus 10 Gtl~~~~~~~~~~~~~a~~al~~l~~~G~~~~~~Tn~~~~~~~~~~~~l~~~g~ 63 (257)
T TIGR01458 10 GVLYISDAKSGVAVPGSQEAVKRLRGASVKVRFVTNTTKESKQDLLERLQRLGF 63 (257)
T ss_pred CeEEeCCCcccCcCCCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHcCC
Confidence 44445555 78899999999999999999999987765 4444555676
No 174
>TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those.
Probab=66.70 E-value=11 Score=41.46 Aligned_cols=49 Identities=10% Similarity=0.084 Sum_probs=39.6
Q ss_pred EeeeecccccCCcHHHHHHHHHcCCeEEEEeC---CCHhhHHHHHHHcCccc
Q 001008 703 GATAVEDKLQKGVPECIDKLAQAGIKVWVLTG---DKMETAINIGYACSLLR 751 (1191)
Q Consensus 703 G~~~ieD~lr~~v~~~I~~L~~aGIkv~mlTG---D~~~ta~~ia~~~gl~~ 751 (1191)
|++.-.+.+=+++.++|+.|++.|++++++|| +..+......++.|+-.
T Consensus 10 Gtl~~~~~~i~~a~~~l~~l~~~g~~~~~~Tnn~~r~~~~~~~~l~~~g~~~ 61 (249)
T TIGR01457 10 GTMYKGKERIPEAETFVHELQKRDIPYLFVTNNSTRTPESVAEMLASFDIPA 61 (249)
T ss_pred CceEcCCeeCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCC
Confidence 44445566778999999999999999999996 67777777778888743
No 175
>TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others.
Probab=66.09 E-value=15 Score=48.79 Aligned_cols=59 Identities=15% Similarity=0.182 Sum_probs=41.7
Q ss_pred HHHHHHHHHHHHHHHHhhhHHHHhcceEEEEecCCeEEEEeccccccccEEEEeCCCcccceEEEEeee
Q 001008 113 VIGATMAKEGVEDWRRRKQDIEANNRKVKVYGQDHTFVETKWKNLRVGDLVKVHKDEYFPADLLLLSSI 181 (1191)
Q Consensus 113 vl~~~~i~~~~~d~~r~k~~~~~n~~~~~V~r~~g~~~~i~~~~L~vGDIV~l~~ge~iPaD~~lL~ss 181 (1191)
++++..+..++++++..++.++++.. . +.....+ ++-|-...+...|.+|-|.+++...
T Consensus 137 ~v~~~~~i~~~~e~~~~~~~~~l~~~----~--~~~~~~V----iRdG~~~~I~~~~Lv~GDiV~l~~G 195 (941)
T TIGR01517 137 SVILVVLVTAVNDYKKELQFRQLNRE----K--SAQKIAV----IRGGQEQQISIHDIVVGDIVSLSTG 195 (941)
T ss_pred HHHHHhHHHHHHHHHHHHHHHHHHhc----c--CCCceEE----EECCEEEEEeHHHCCCCCEEEECCC
Confidence 34556677888898888888777632 1 2222222 3458889999999999999999843
No 176
>PHA03398 viral phosphatase superfamily protein; Provisional
Probab=62.90 E-value=10 Score=42.20 Aligned_cols=40 Identities=15% Similarity=0.135 Sum_probs=35.9
Q ss_pred cc-CCcHHHHHHHHHcCCeEEEEeCCCHhhHHHHHHHcCcc
Q 001008 711 LQ-KGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLL 750 (1191)
Q Consensus 711 lr-~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gl~ 750 (1191)
+| |++.+++++|+++|+++.++|+-..+.+..+....|+.
T Consensus 148 irdp~V~EtL~eLkekGikLaIvTNg~Re~v~~~Le~lgL~ 188 (303)
T PHA03398 148 IRDPFVYDSLDELKERGCVLVLWSYGNREHVVHSLKETKLE 188 (303)
T ss_pred cCChhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHcCCC
Confidence 35 89999999999999999999987778888899999994
No 177
>TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509).
Probab=62.31 E-value=20 Score=37.18 Aligned_cols=38 Identities=11% Similarity=0.001 Sum_probs=31.5
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEeCCCHhhHHHHHHHcCcc
Q 001008 710 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLL 750 (1191)
Q Consensus 710 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gl~ 750 (1191)
++.+|+.++++.|+ .+++++|+-....+..+....|+.
T Consensus 84 ~~~~g~~~~L~~L~---~~~~i~Tn~~~~~~~~~l~~~gl~ 121 (184)
T TIGR01993 84 KPDPELRNLLLRLP---GRKIIFTNGDRAHARRALNRLGIE 121 (184)
T ss_pred CCCHHHHHHHHhCC---CCEEEEeCCCHHHHHHHHHHcCcH
Confidence 36789999999998 479999998888888888888873
No 178
>PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional
Probab=60.75 E-value=19 Score=37.45 Aligned_cols=35 Identities=17% Similarity=0.014 Sum_probs=29.7
Q ss_pred cHHHHHHHHHcCCeEEEEeCCCHhhHHHHHHHcCcc
Q 001008 715 VPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLL 750 (1191)
Q Consensus 715 v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gl~ 750 (1191)
..++++.|++. +++.++||.....+..+-...|+.
T Consensus 92 ~~e~L~~L~~~-~~l~I~T~~~~~~~~~~l~~~~l~ 126 (188)
T PRK10725 92 LIEVVKAWHGR-RPMAVGTGSESAIAEALLAHLGLR 126 (188)
T ss_pred HHHHHHHHHhC-CCEEEEcCCchHHHHHHHHhCCcH
Confidence 36899999865 899999999999988888888873
No 179
>COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only]
Probab=60.54 E-value=29 Score=37.30 Aligned_cols=43 Identities=26% Similarity=0.223 Sum_probs=38.7
Q ss_pred ccccCCcHHHHHHHHHcCCeEEEEeCCCHhhHHHHHHHcCccc
Q 001008 709 DKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLR 751 (1191)
Q Consensus 709 D~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gl~~ 751 (1191)
.++.+|+.+.++.|++.|+++.+.|+-....+..+....|+..
T Consensus 85 ~~~~pGv~~~l~~L~~~~i~~avaS~s~~~~~~~~L~~~gl~~ 127 (221)
T COG0637 85 LKPIPGVVELLEQLKARGIPLAVASSSPRRAAERVLARLGLLD 127 (221)
T ss_pred CCCCccHHHHHHHHHhcCCcEEEecCChHHHHHHHHHHccChh
Confidence 4788999999999999999999999999888888888888853
No 180
>KOG0210 consensus P-type ATPase [Inorganic ion transport and metabolism]
Probab=58.01 E-value=62 Score=39.75 Aligned_cols=181 Identities=10% Similarity=0.056 Sum_probs=114.0
Q ss_pred eeecCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHh-cccCCcCCCchhhHHHHHHHHHHHHHHHHHHHHHhhhHHHHhc
Q 001008 59 YVSTTKYTAANFIPKSLFEQFRRVANIYFLVVAFVS-FSPLAPYSAPSVLAPLIVVIGATMAKEGVEDWRRRKQDIEANN 137 (1191)
Q Consensus 59 ~i~~~k~~~~~flp~~l~~qf~~~~n~~fl~~~il~-~~~~~~~~~~~~~~~l~~vl~~~~i~~~~~d~~r~k~~~~~n~ 137 (1191)
..+-..|+++.+++...|.+|....++++.+..++. +-.-....+|..+++++++.++--..|-++.++|.+.++..+-
T Consensus 86 nqKyn~~tF~p~vl~~qF~~F~nlyfll~alsQ~ip~~~ig~l~ty~~pl~fvl~itl~keavdd~~r~~rd~~~Nse~y 165 (1051)
T KOG0210|consen 86 NQKYNIFTFVPAVLFEQFKFFLNLYFLLVALSQLIPALKIGYLSTYWGPLGFVLTITLIKEAVDDLKRRRRDRELNSEKY 165 (1051)
T ss_pred hcccceEEeeHHHHHHHHHHHHHHHHHHHHHHhhCchheecchhhhhHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhh
Confidence 344567899999999999999999999998876542 1111223456667778888889999999999999999877653
Q ss_pred ceEE----------EEecCCeEEEEeccccccccEEEEeCCCcccceEEEEeeeCCCceE-------EEEeccCCccccc
Q 001008 138 RKVK----------VYGQDHTFVETKWKNLRVGDLVKVHKDEYFPADLLLLSSIYEDGIC-------YVETMNLDGETNL 200 (1191)
Q Consensus 138 ~~~~----------V~r~~g~~~~i~~~~L~vGDIV~l~~ge~iPaD~~lL~ss~~~g~~-------~Vd~s~LtGEs~~ 200 (1191)
.+.+ -+. -|....+.-.+=+|-|.|.++.-|.--. ..+.+..-||.- .--+..++-++.+
T Consensus 166 ~~ltr~~~~~~~Ss~i~-vGDvi~v~K~~RVPADmilLrTsd~sg~--~FiRTDQLDGETDWKLrl~vp~tQ~l~~~~el 242 (1051)
T KOG0210|consen 166 TKLTRDGTRREPSSDIK-VGDVIIVHKDERVPADMILLRTSDKSGS--CFIRTDQLDGETDWKLRLPVPRTQHLTEDSEL 242 (1051)
T ss_pred eeeccCCcccccccccc-cccEEEEecCCcCCcceEEEEccCCCCc--eEEeccccCCcccceeeccchhhccCCcccch
Confidence 2221 122 5778888888999999999987764311 223333323321 0113444444433
Q ss_pred EeecchhhhcccCChhhhcccceEEEeecCC------CCceeeEEEEEEcCe
Q 001008 201 KLKRSLEATNHLRDEESFQKFTAVIKCEDPN------ERLYSFVGTLQYEGK 246 (1191)
Q Consensus 201 ~~K~~~~~~~~~~~~~~~~~~~~~i~~e~pn------~~~~~f~Gt~~~~g~ 246 (1191)
..-. .......+++..|-|++..+..+ -+...+++|++-.|.
T Consensus 243 ~~i~----v~Ae~P~kdIh~F~Gt~~~~d~~~~~~LsventLWanTVvAs~t 290 (1051)
T KOG0210|consen 243 MEIS----VYAEKPQKDIHSFVGTFTITDSDKPESLSVENTLWANTVVASGT 290 (1051)
T ss_pred heEE----EeccCcchhhHhhEEEEEEecCCCCCcccccceeeeeeeEecCc
Confidence 2221 11111234556677777665432 233678888888775
No 181
>PF05297 Herpes_LMP1: Herpesvirus latent membrane protein 1 (LMP1); InterPro: IPR007961 This family consists of several latent membrane protein 1 or LMP1s mostly from Epstein-Barr virus (strain GD1) (HHV-4) (Human herpesvirus 4). LMP1 of HHV-4 is a 62-65 kDa plasma membrane protein possessing six membrane spanning regions, a short cytoplasmic N terminus and a long cytoplasmic carboxy tail of 200 amino acids. HHV-4 virus latent membrane protein 1 (LMP1) is essential for HHV-4 mediated transformation and has been associated with several cases of malignancies. HHV-4-like viruses in Macaca fascicularis (Cynomolgus monkeys) have been associated with high lymphoma rates in immunosuppressed monkeys [].; GO: 0019087 transformation of host cell by virus, 0016021 integral to membrane; PDB: 1CZY_E 1ZMS_B.
Probab=57.99 E-value=3.3 Score=44.33 Aligned_cols=17 Identities=35% Similarity=0.589 Sum_probs=0.0
Q ss_pred cCHhHHHHHHHHHHHHH
Q 001008 1112 PSILYWLTTLLVVVSTL 1128 (1191)
Q Consensus 1112 ~s~~~wl~~l~~~~~~l 1128 (1191)
+.-.+|+++++.+.+.+
T Consensus 167 L~dL~WL~LFlaiLIWl 183 (381)
T PF05297_consen 167 LVDLYWLLLFLAILIWL 183 (381)
T ss_dssp -----------------
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 34567888776655443
No 182
>PF06570 DUF1129: Protein of unknown function (DUF1129); InterPro: IPR009214 There are currently no experimental data for members of this group or their homologues. However, these proteins contain predicted integral membrane proteins (with several transmembrane segments).
Probab=54.79 E-value=1.8e+02 Score=30.82 Aligned_cols=24 Identities=25% Similarity=0.548 Sum_probs=12.2
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCC
Q 001008 1074 HFFIWGSIALWYIFLVVYGSLPPT 1097 (1191)
Q Consensus 1074 ~~~i~~si~~~~i~~~i~~~~~~~ 1097 (1191)
....++.+++++++..+...+|..
T Consensus 150 ~~~~~~~~~~w~~~~~~~~~lp~~ 173 (206)
T PF06570_consen 150 ILISVLAMVLWIVIFVLTSFLPPV 173 (206)
T ss_pred HHHHHHHHHHHHHHHHHHHHcccc
Confidence 333444555555555555556643
No 183
>TIGR01689 EcbF-BcbF capsule biosynthesis phosphatase. Due to the likelihood that the substrates of these enzymes are different depending on the nature of the particular polysaccharides associated with each species, this model has been classified as a subfamily despite the close homology.
Probab=53.98 E-value=11 Score=36.61 Aligned_cols=33 Identities=15% Similarity=0.091 Sum_probs=28.7
Q ss_pred ccccCCcHHHHHHHHHcCCeEEEEeCCCHhhHH
Q 001008 709 DKLQKGVPECIDKLAQAGIKVWVLTGDKMETAI 741 (1191)
Q Consensus 709 D~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~ 741 (1191)
+++.+++.++++.+++.|++++++||+......
T Consensus 23 ~~~~~~~ie~L~~l~~~G~~IiiaTGR~~~~~~ 55 (126)
T TIGR01689 23 VAPILAVIEKLRHYKALGFEIVISSSRNMRTYE 55 (126)
T ss_pred cccCHHHHHHHHHHHHCCCEEEEECCCCchhhh
Confidence 567788999999999999999999999877654
No 184
>TIGR01663 PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase. Note that the EC number for the kinase function is: 2.7.1.78
Probab=53.68 E-value=30 Score=42.25 Aligned_cols=27 Identities=22% Similarity=0.439 Sum_probs=24.1
Q ss_pred ccCCcHHHHHHHHHcCCeEEEEeCCCH
Q 001008 711 LQKGVPECIDKLAQAGIKVWVLTGDKM 737 (1191)
Q Consensus 711 lr~~v~~~I~~L~~aGIkv~mlTGD~~ 737 (1191)
+-++++++|+.|+++|++++++|.-..
T Consensus 198 l~pgV~e~L~~L~~~Gy~IvIvTNQ~g 224 (526)
T TIGR01663 198 IFPEIPEKLKELEADGFKICIFTNQGG 224 (526)
T ss_pred cccCHHHHHHHHHHCCCEEEEEECCcc
Confidence 459999999999999999999998544
No 185
>KOG3040 consensus Predicted sugar phosphatase (HAD superfamily) [General function prediction only]
Probab=51.93 E-value=27 Score=36.35 Aligned_cols=48 Identities=27% Similarity=0.324 Sum_probs=41.6
Q ss_pred ceEEEeeeecccccCCcHHHHHHHHHcCCeEEEEeCCCHhhHHHHHHH
Q 001008 699 LILLGATAVEDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYA 746 (1191)
Q Consensus 699 l~llG~~~ieD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~ 746 (1191)
+.+-|.+-+||-.-|++.|+++.||+++.+|..+|.-+.+.-..+.++
T Consensus 12 lDlSGtLh~e~~avpga~eAl~rLr~~~~kVkFvTNttk~Sk~~l~~r 59 (262)
T KOG3040|consen 12 LDLSGTLHIEDAAVPGAVEALKRLRDQHVKVKFVTNTTKESKRNLHER 59 (262)
T ss_pred EeccceEecccccCCCHHHHHHHHHhcCceEEEEecCcchhHHHHHHH
Confidence 456799999999999999999999999999999998877766666544
No 186
>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458. This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.
Probab=51.61 E-value=40 Score=37.20 Aligned_cols=52 Identities=19% Similarity=0.296 Sum_probs=34.1
Q ss_pred CCEEEEEcCCc-cChHhhhhcceeE-Ee-ccCc----cchhhhccceeccchhhhhHhh
Q 001008 859 GKTTLAIGDGA-NDVGMLQEADIGV-GI-SGVE----GMQAVMSSDYAIAQFRFLERLL 910 (1191)
Q Consensus 859 g~~vl~iGDG~-ND~~ml~~AdvGI-~i-~g~e----~~~a~~~aD~vl~~f~~l~~ll 910 (1191)
...++||||.. +|+.+=+.+++-- .+ .|.. .......+|+++.++..+..++
T Consensus 196 ~~~~~~vGD~~~~Di~~a~~~G~~~i~v~~G~~~~~~~~~~~~~pd~~~~sl~el~~~l 254 (257)
T TIGR01458 196 PEEAVMIGDDCRDDVGGAQDCGMRGIQVRTGKYRPSDEEKINVPPDLTCDSLPHAVDLI 254 (257)
T ss_pred hhhEEEECCCcHHHHHHHHHcCCeEEEECCCCCChHHhcccCCCCCEEECCHHHHHHHH
Confidence 36799999996 8999888887754 44 3321 1112245788887777666553
No 187
>TIGR02251 HIF-SF_euk Dullard-like phosphatase domain. This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031.
Probab=51.11 E-value=12 Score=38.07 Aligned_cols=43 Identities=14% Similarity=0.020 Sum_probs=37.5
Q ss_pred eecccccCCcHHHHHHHHHcCCeEEEEeCCCHhhHHHHHHHcCc
Q 001008 706 AVEDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSL 749 (1191)
Q Consensus 706 ~ieD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gl 749 (1191)
.+.=..|||+.+.++.|.+. ..+++.|--....|..+...++.
T Consensus 38 ~~~v~~RPgl~eFL~~l~~~-yei~I~Ts~~~~yA~~il~~ldp 80 (162)
T TIGR02251 38 PVYVFKRPHVDEFLERVSKW-YELVIFTASLEEYADPVLDILDR 80 (162)
T ss_pred EEEEEECCCHHHHHHHHHhc-CEEEEEcCCcHHHHHHHHHHHCc
Confidence 44447899999999999987 99999999999999998887765
No 188
>PRK10748 flavin mononucleotide phosphatase; Provisional
Probab=49.87 E-value=62 Score=35.21 Aligned_cols=28 Identities=11% Similarity=0.264 Sum_probs=22.9
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEeCCCHh
Q 001008 710 KLQKGVPECIDKLAQAGIKVWVLTGDKME 738 (1191)
Q Consensus 710 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ 738 (1191)
++-||+.++++.|++. +++.++|.-+..
T Consensus 113 ~~~~gv~~~L~~L~~~-~~l~i~Tn~~~~ 140 (238)
T PRK10748 113 DVPQATHDTLKQLAKK-WPLVAITNGNAQ 140 (238)
T ss_pred CCCccHHHHHHHHHcC-CCEEEEECCCch
Confidence 4668999999999975 899999985543
No 189
>PF12791 RsgI_N: Anti-sigma factor N-terminus; InterPro: IPR024449 The heat shock genes in Bacillus subtilis can be classified into several groups according to their regulation [], and the sigma gene, sigI, of Bacillus subtilis belongs to the group IV heat-shock response genes and has many orthologues in the bacterial phylum Firmicutes []. Regulation of sigma factor I is carried out by RsgI from the same operon. This entry represents the N-terminal cytoplasmic portion of RsgI ('upstream' of the single transmembrane helix) which has been shown to interact directly with Sigma-I [].
Probab=49.42 E-value=24 Score=28.68 Aligned_cols=39 Identities=18% Similarity=0.344 Sum_probs=32.1
Q ss_pred HhcceEEEEecCCeEEEEecc-ccccccEEEEeCCCcccc
Q 001008 135 ANNRKVKVYGQDHTFVETKWK-NLRVGDLVKVHKDEYFPA 173 (1191)
Q Consensus 135 ~n~~~~~V~r~~g~~~~i~~~-~L~vGDIV~l~~ge~iPa 173 (1191)
+....+.|+.+||++.+|+.. +..+||.|.+.+.+..+.
T Consensus 3 i~~~~aiVlT~dGeF~~ik~~~~~~vG~eI~~~~~~~~~~ 42 (56)
T PF12791_consen 3 IKKKYAIVLTPDGEFIKIKRKPGMEVGQEIEFDEKDIINK 42 (56)
T ss_pred CcCCEEEEEcCCCcEEEEeCCCCCcccCEEEEechhhccc
Confidence 346678888889999999864 799999999999887654
No 190
>COG1011 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=48.70 E-value=1.4e+02 Score=31.90 Aligned_cols=40 Identities=18% Similarity=0.066 Sum_probs=32.6
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEeCCCHhhHHHHHHHcCcc
Q 001008 710 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLL 750 (1191)
Q Consensus 710 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gl~ 750 (1191)
++-+++.++++.++.. .+++++|--....+.....++||.
T Consensus 99 ~~~~~~~~~L~~l~~~-~~l~ilTNg~~~~~~~~l~~~gl~ 138 (229)
T COG1011 99 PDYPEALEALKELGKK-YKLGILTNGARPHQERKLRQLGLL 138 (229)
T ss_pred ccChhHHHHHHHHHhh-ccEEEEeCCChHHHHHHHHHcCCh
Confidence 4567888888888888 889999997777788888888863
No 191
>COG4858 Uncharacterized membrane-bound protein conserved in bacteria [Function unknown]
Probab=48.60 E-value=1.3e+02 Score=30.80 Aligned_cols=35 Identities=20% Similarity=0.286 Sum_probs=27.0
Q ss_pred hccchhhHHHHHHHHHHHHHHHHHHHhcCCCCCcc
Q 001008 1066 INYFTWIQHFFIWGSIALWYIFLVVYGSLPPTFST 1100 (1191)
Q Consensus 1066 ~~~~~~~~~~~i~~si~~~~i~~~i~~~~~~~~~~ 1100 (1191)
.|.|+|-......+|+++|+++.++..++|..++.
T Consensus 157 qr~~~~K~~lv~~~sm~lWi~v~i~t~~lPtslN~ 191 (226)
T COG4858 157 QRPGTWKYLLVAVLSMLLWIAVMIATVFLPTSLNP 191 (226)
T ss_pred cCCchHHHHHHHHHHHHHHHHHHHHHhhCCCcCCc
Confidence 45677777778888999998888877888875443
No 192
>TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant. Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein.
Probab=48.00 E-value=1.6e+02 Score=39.13 Aligned_cols=64 Identities=25% Similarity=0.471 Sum_probs=45.7
Q ss_pred HHHHHHHHHHHhhcCceEEEc------CCh--hhHHHHHHHh-hcCC----CEEEEEcCCcc-C-hHhhhhcceeEEecc
Q 001008 822 KKLEKMFLDLAIDCASVICCR------SSP--KQKALVTRLV-KGTG----KTTLAIGDGAN-D-VGMLQEADIGVGISG 886 (1191)
Q Consensus 822 ~~~~~~~~~l~~~~~~~v~~r------~sP--~qK~~iV~~l-~~~g----~~vl~iGDG~N-D-~~ml~~AdvGI~i~g 886 (1191)
+++++.+......|+.+ +|+ +-| ..|.+.++.| .+.| ++++.+||+.| | ..|+.--|-+|=+.|
T Consensus 924 ~elr~~Lr~~gLr~~~i-ys~~~~~LDVlP~~ASKgqAlRyL~~rwgi~l~~v~VfaGdSGntD~e~Ll~G~~~tvi~~g 1002 (1050)
T TIGR02468 924 KELRKLLRIQGLRCHAV-YCRNGTRLNVIPLLASRSQALRYLFVRWGIELANMAVFVGESGDTDYEGLLGGLHKTVILKG 1002 (1050)
T ss_pred HHHHHHHHhCCCceEEE-eecCCcEeeeeeCCCCHHHHHHHHHHHcCCChHHeEEEeccCCCCCHHHHhCCceeEEEEec
Confidence 36667777666777743 443 344 3799999999 5544 56677999999 9 668888888886555
No 193
>TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V). These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in.
Probab=45.35 E-value=1.3e+02 Score=40.68 Aligned_cols=79 Identities=16% Similarity=0.197 Sum_probs=56.7
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhhHHHHhcceEEEEecCCeEEEEeccccccccEEEEeCCCcccceEEEEe--eeCCC
Q 001008 107 LAPLIVVIGATMAKEGVEDWRRRKQDIEANNRKVKVYGQDHTFVETKWKNLRVGDLVKVHKDEYFPADLLLLS--SIYED 184 (1191)
Q Consensus 107 ~~~l~~vl~~~~i~~~~~d~~r~k~~~~~n~~~~~V~r~~g~~~~i~~~~L~vGDIV~l~~ge~iPaD~~lL~--ss~~~ 184 (1191)
+.--++++++..+......++++++.+++..... ......| ++-|..+.+...|.+|-|+++|. ..
T Consensus 193 ~~~~~~i~~i~~~~~~~~~~~~~k~~~~L~~~~~-----~~~~v~V----~Rdg~~~~I~s~eLvpGDiv~l~~~~g--- 260 (1054)
T TIGR01657 193 YYYSLCIVFMSSTSISLSVYQIRKQMQRLRDMVH-----KPQSVIV----IRNGKWVTIASDELVPGDIVSIPRPEE--- 260 (1054)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-----CCeeEEE----EECCEEEEEEcccCCCCCEEEEecCCC---
Confidence 4455677788888899999999999887776432 1222333 35689999999999999999998 32
Q ss_pred ceEEEEeccCCcc
Q 001008 185 GICYVETMNLDGE 197 (1191)
Q Consensus 185 g~~~Vd~s~LtGE 197 (1191)
..+=+|--.|+|+
T Consensus 261 ~~iPaD~~ll~g~ 273 (1054)
T TIGR01657 261 KTMPCDSVLLSGS 273 (1054)
T ss_pred CEecceEEEEeCc
Confidence 2355666666663
No 194
>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family. This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.
Probab=44.26 E-value=41 Score=37.65 Aligned_cols=50 Identities=20% Similarity=0.283 Sum_probs=36.4
Q ss_pred EeeeecccccCCcHHHHHHHHHcCCeEEEEeCCCHhhHHH---HHHHcCcccc
Q 001008 703 GATAVEDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAIN---IGYACSLLRQ 752 (1191)
Q Consensus 703 G~~~ieD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~---ia~~~gl~~~ 752 (1191)
|++.-.+.+=+++.++|+.|++.|++++++||....+... --+++|+...
T Consensus 11 Gtl~~~~~~~~ga~e~l~~L~~~g~~~~~~Tnns~~~~~~~~~~l~~~G~~~~ 63 (279)
T TIGR01452 11 GVLWLGERVVPGAPELLDRLARAGKAALFVTNNSTKSRAEYALKFARLGFNGL 63 (279)
T ss_pred CceEcCCeeCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCC
Confidence 4444467778899999999999999999999976443333 3355777433
No 195
>COG1188 Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) [Translation, ribosomal structure and biogenesis]
Probab=41.48 E-value=41 Score=30.87 Aligned_cols=35 Identities=20% Similarity=0.280 Sum_probs=27.0
Q ss_pred HHHHhcceEEEEecCCeEEEEeccccccccEEEEeCCCc
Q 001008 132 DIEANNRKVKVYGQDHTFVETKWKNLRVGDLVKVHKDEY 170 (1191)
Q Consensus 132 ~~~~n~~~~~V~r~~g~~~~i~~~~L~vGDIV~l~~ge~ 170 (1191)
-.-.....+++ ||+.. .++.++++||+|.|.-|..
T Consensus 28 k~~~~~GrV~v---NG~~a-KpS~~VK~GD~l~i~~~~~ 62 (100)
T COG1188 28 KEMIEGGRVKV---NGQRA-KPSKEVKVGDILTIRFGNK 62 (100)
T ss_pred HHHHHCCeEEE---CCEEc-ccccccCCCCEEEEEeCCc
Confidence 33445666665 77766 8999999999999998864
No 196
>PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=40.75 E-value=9.6e+02 Score=31.34 Aligned_cols=43 Identities=16% Similarity=0.055 Sum_probs=30.6
Q ss_pred ccCCcHHHHHHHHHc-CCeEEEEeCCCHhhHHHHHHH--cCccccC
Q 001008 711 LQKGVPECIDKLAQA-GIKVWVLTGDKMETAINIGYA--CSLLRQE 753 (1191)
Q Consensus 711 lr~~v~~~I~~L~~a-GIkv~mlTGD~~~ta~~ia~~--~gl~~~~ 753 (1191)
+-+++.++++.|.+. +-.|+++||+..++....... +++...+
T Consensus 533 p~~~l~~~L~~L~~d~~~~V~IvSGR~~~~L~~~~~~~~l~l~aeH 578 (797)
T PLN03063 533 LHPELKETLKALCSDPKTTVVVLSRSGKDILDKNFGEYNIWLAAEN 578 (797)
T ss_pred CCHHHHHHHHHHHcCCCCEEEEEeCCCHHHHHHHhCCCCCcEEEeC
Confidence 445677788888654 689999999999888776644 3344443
No 197
>PTZ00445 p36-lilke protein; Provisional
Probab=40.26 E-value=43 Score=35.35 Aligned_cols=29 Identities=21% Similarity=0.146 Sum_probs=25.1
Q ss_pred ccCCcHHHHHHHHHcCCeEEEEeCCCHhh
Q 001008 711 LQKGVPECIDKLAQAGIKVWVLTGDKMET 739 (1191)
Q Consensus 711 lr~~v~~~I~~L~~aGIkv~mlTGD~~~t 739 (1191)
++|+.++.++.|+++||+|.++|=-..++
T Consensus 76 ~tpefk~~~~~l~~~~I~v~VVTfSd~~~ 104 (219)
T PTZ00445 76 VTPDFKILGKRLKNSNIKISVVTFSDKEL 104 (219)
T ss_pred CCHHHHHHHHHHHHCCCeEEEEEccchhh
Confidence 68889999999999999999999755543
No 198
>TIGR01680 Veg_Stor_Prot vegetative storage protein. The proteins represented by this model are close relatives of the plant acid phosphatases (TIGR01675), are limited to members of the Phaseoleae including Glycine max (soybean) and Phaseolus vulgaris (kidney bean). These proteins are highly expressed in the leaves of repeatedly depodded plants. VSP differs most strinkingly from the acid phosphatases in the lack of the conserved nucleophilic aspartate residue in the N-terminus, thus, they should be inactive as phosphatases. This issue was confused by the publication in 1992 of an article claiming activity for the Glycine max VSP. In 1994 this assertion was refuted by the separation of the activity from the VSP.
Probab=39.18 E-value=1.1e+02 Score=33.82 Aligned_cols=30 Identities=20% Similarity=0.257 Sum_probs=26.0
Q ss_pred ccccCCcHHHHHHHHHcCCeEEEEeCCCHh
Q 001008 709 DKLQKGVPECIDKLAQAGIKVWVLTGDKME 738 (1191)
Q Consensus 709 D~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ 738 (1191)
.|.-|++.+..+.+++.|++|+++||+...
T Consensus 144 ApAlp~al~ly~~l~~~G~kIf~VSgR~e~ 173 (275)
T TIGR01680 144 APALPETLKNYNKLVSLGFKIIFLSGRLKD 173 (275)
T ss_pred CCCChHHHHHHHHHHHCCCEEEEEeCCchh
Confidence 355678999999999999999999999854
No 199
>COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism]
Probab=38.95 E-value=37 Score=37.59 Aligned_cols=46 Identities=22% Similarity=0.251 Sum_probs=39.4
Q ss_pred EEEeeeecccccCCcHHHHHHHHHcCCeEEEEeCCCHhhHHHHHHH
Q 001008 701 LLGATAVEDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYA 746 (1191)
Q Consensus 701 llG~~~ieD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~ 746 (1191)
+=|++.--+.+=|++.++|+.|+++|++++.+|.-...+...++.+
T Consensus 15 lDGvl~~G~~~ipga~e~l~~L~~~g~~~iflTNn~~~s~~~~~~~ 60 (269)
T COG0647 15 LDGVLYRGNEAIPGAAEALKRLKAAGKPVIFLTNNSTRSREVVAAR 60 (269)
T ss_pred CcCceEeCCccCchHHHHHHHHHHcCCeEEEEeCCCCCCHHHHHHH
Confidence 3477888889999999999999999999999999888887755444
No 200
>cd02071 MM_CoA_mut_B12_BD methylmalonyl CoA mutase B12 binding domain. This domain binds to B12 (adenosylcobamide), which initiates the conversion of succinyl CoA and methylmalonyl CoA by forming an adenosyl radical, which then undergoes a rearrangement exchanging a hydrogen atom with a group attached to a neighboring carbon atom. This family is present in both mammals and bacteria. Bacterial members are heterodimers and involved in the fermentation of pyruvate to propionate. Mammalian members are homodimers and responsible for the conversion of odd-chain fatty acids and branched-chain amino acids via propionyl CoA to succinyl CoA for further degradation.
Probab=35.48 E-value=1e+02 Score=29.64 Aligned_cols=80 Identities=18% Similarity=0.222 Sum_probs=56.6
Q ss_pred HHHhccceEEEEEEEecCHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHHhhccceEEEeeeecccccCCcHHHHHHHHH
Q 001008 645 RYAEAGLRTLVIAYRELGEDEYRIWEKEFLKAKTSVTSDREALVASAAEKIERDLILLGATAVEDKLQKGVPECIDKLAQ 724 (1191)
Q Consensus 645 ~~a~~GlR~L~~A~r~l~~~~~~~~~~~~~~a~~~l~~~r~~~~~~~~~~iE~dl~llG~~~ieD~lr~~v~~~I~~L~~ 724 (1191)
-+...|++|+.++.. .+.++.. ....+.+-.++++.+......+.+++.++.|++
T Consensus 22 ~l~~~G~~vi~lG~~-vp~e~~~------------------------~~a~~~~~d~V~iS~~~~~~~~~~~~~~~~L~~ 76 (122)
T cd02071 22 ALRDAGFEVIYTGLR-QTPEEIV------------------------EAAIQEDVDVIGLSSLSGGHMTLFPEVIELLRE 76 (122)
T ss_pred HHHHCCCEEEECCCC-CCHHHHH------------------------HHHHHcCCCEEEEcccchhhHHHHHHHHHHHHh
Confidence 467899999998854 3433321 122246777888888888899999999999999
Q ss_pred cCC-e-EEEEeCCCHhhHHHHHHHcCc
Q 001008 725 AGI-K-VWVLTGDKMETAINIGYACSL 749 (1191)
Q Consensus 725 aGI-k-v~mlTGD~~~ta~~ia~~~gl 749 (1191)
+|. + .+++-|..+.--..-.++.|+
T Consensus 77 ~~~~~i~i~~GG~~~~~~~~~~~~~G~ 103 (122)
T cd02071 77 LGAGDILVVGGGIIPPEDYELLKEMGV 103 (122)
T ss_pred cCCCCCEEEEECCCCHHHHHHHHHCCC
Confidence 977 3 356666655444556668886
No 201
>KOG4050 consensus Glutamate transporter EAAC1-interacting protein GTRAP3-18 [Amino acid transport and metabolism; Signal transduction mechanisms]
Probab=33.11 E-value=2.4e+02 Score=28.16 Aligned_cols=44 Identities=23% Similarity=0.229 Sum_probs=24.2
Q ss_pred ccceeccchhhhhHhhhhhchhhhhHhhHhHHHHHHhHHHHHHH
Q 001008 895 SSDYAIAQFRFLERLLLVHGHWCYRRISMMICYFFYKNLTFGFT 938 (1191)
Q Consensus 895 ~aD~vl~~f~~l~~lll~~GR~~~~~i~~~i~~~~~~n~~~~~~ 938 (1191)
--||++...++-..-.-.-.||+.+-++.++.|.--+-++++..
T Consensus 22 ~ddF~lgS~Rfa~Pd~~D~~kW~nRVisNLLYyQTNYfv~~it~ 65 (188)
T KOG4050|consen 22 LDDFLLGSDRFARPDFNDFKKWNNRVISNLLYYQTNYFVTFITL 65 (188)
T ss_pred HHHhccCcccccCCCCccHHHHHHHHHHHHHHHHHhHHHHHHHH
Confidence 34566655555322223445677777777777765444444433
No 202
>cd06919 Asp_decarbox Aspartate alpha-decarboxylase or L-aspartate 1-decarboxylase, a pyruvoyl group-dependent decarboxylase in beta-alanine production. Decarboxylation of aspartate is the major route of beta-alanine production in bacteria, and is catalyzed by the enzyme L-aspartate decarboxylase (ADC), EC:4.1.1.11 which requires a pyruvoyl group for its activity. The pyruvoyl cofactor is covalently bound to the enzyme. The protein is synthesized as a proenzyme and cleaved via self-processing at Gly23-Ser24 to yield an alpha chain (C-terminal fragment) and beta chain (N-terminal fragment), and the pyruvoyl group. Beta-alanine is required for the biosynthesis of pantothenate, in which the enzyme plays a critical regulatory role. The active site of the tetrameric enzyme is located at the interface of two subunits, with a Lysine and a Histidine from the beta chain of one subunit forming the active site with residues from the alpha chain of the adjacent subunit. This alignment
Probab=33.08 E-value=82 Score=29.46 Aligned_cols=83 Identities=19% Similarity=0.306 Sum_probs=55.4
Q ss_pred CceEEecCCccHHHHHHHHHHcCcEEEeecCCeeEEEecCCCCccccceEEEEeEeecccCCCceEEEEEEcCCCcEEEE
Q 001008 537 GEISYEAESPDEAAFVIAAREVGFQFFGSSQTSISLHELDPVSGQKVNRVYELLHVLEFTSSRKRMSVMVRNPENQLLLL 616 (1191)
Q Consensus 537 ~~~~y~~~sp~e~Alv~~a~~~g~~~~~~~~~~~~i~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~ 616 (1191)
..+.|.++=..|..|+++|. ...|+.+.+..-++.-+..+.++.-+.|.-.+-
T Consensus 17 a~L~YeGSitID~~Ll~aag---------------------------i~~~E~V~I~Nv~NG~Rf~TYvI~g~~gSg~I~ 69 (111)
T cd06919 17 ADLNYEGSITIDEDLLEAAG---------------------------ILPYEKVLVVNVNNGARFETYVIPGERGSGVIC 69 (111)
T ss_pred cccccceeEEECHHHHHhcC---------------------------CCCCCEEEEEECCCCcEEEEEEEEcCCCCCEEE
Confidence 35678888888899998764 233444445555555555566666665555555
Q ss_pred EeccchHHHHHHhhcChhhHHHHHHHHHHHHhccceEEEEEEEecCHHHHHH
Q 001008 617 CKGADSVMFERLSKHGQQFEAETRRHINRYAEAGLRTLVIAYRELGEDEYRI 668 (1191)
Q Consensus 617 ~KGa~~~i~~~~~~~~~~~~~~~~~~l~~~a~~GlR~L~~A~r~l~~~~~~~ 668 (1191)
.-||. ..+.+.|=|++..||-.++++|...
T Consensus 70 lNGAA----------------------Ar~~~~GD~vII~sy~~~~~~e~~~ 99 (111)
T cd06919 70 LNGAA----------------------ARLGQPGDRVIIMAYALMDEEEAEG 99 (111)
T ss_pred eCCHH----------------------HhcCCCCCEEEEEECccCCHHHHhc
Confidence 66764 1235678999999999999887543
No 203
>KOG1278 consensus Endosomal membrane proteins, EMP70 [Intracellular trafficking, secretion, and vesicular transport]
Probab=32.91 E-value=4e+02 Score=32.35 Aligned_cols=78 Identities=15% Similarity=0.119 Sum_probs=38.9
Q ss_pred cccccchhHHHHHHHHHHhhhhhHHhhhcc---cccCChhh--hhcCccchhccccCCccchhhHHHhhHhHHHHHHHHH
Q 001008 948 FSGRPAYNDWYMSCYNVFFTSLPVIALGVF---DQDVSARL--CLKYPLLYQEGVQNILFSWPRILGWMSNGVLSAIIIF 1022 (1191)
Q Consensus 948 ~s~~~~~~~~~~l~~n~~~~~~p~~~l~~~---~~d~~~~~--~~~~P~ly~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 1022 (1191)
-||..||..+..++.--+..+.|...+|.. .++..+.- ..+.|+ +-|.++.... .+...++.|++-..++|
T Consensus 426 SSgAvPF~T~~~ll~LwF~isVPLsf~G~y~g~kk~~~e~PvrTNqIpR---qIP~q~~y~~-~~~~ili~GilPFg~if 501 (628)
T KOG1278|consen 426 SSGAVPFSTMVALLFLWFGISVPLSFVGGYFGFKKPAIEHPVRTNQIPR---QIPEQPWYLN-PIPSILIAGILPFGAIF 501 (628)
T ss_pred CCCcccHHHHHHHHHHHHHhhhhHHHhhHHhhccCCCCCCCcccCCCcc---cCCCCccccc-hhhHHHhhcccchHHHH
Confidence 466677877765555445556776665531 11111111 112222 2333333322 45566666777666666
Q ss_pred HHHHhhh
Q 001008 1023 FFTTNSI 1029 (1191)
Q Consensus 1023 ~~~~~~~ 1029 (1191)
+=.++++
T Consensus 502 IELfFI~ 508 (628)
T KOG1278|consen 502 IELFFIL 508 (628)
T ss_pred HHHHHHH
Confidence 5555544
No 204
>PF13242 Hydrolase_like: HAD-hyrolase-like; PDB: 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A 2HX1_D 2X4D_A 3HLT_C 3L1U_B ....
Probab=31.96 E-value=92 Score=26.81 Aligned_cols=46 Identities=22% Similarity=0.402 Sum_probs=32.0
Q ss_pred CCEEEEEcCC-ccChHhhhhcceeE-Ee-ccCccch----hhhccceeccchh
Q 001008 859 GKTTLAIGDG-ANDVGMLQEADIGV-GI-SGVEGMQ----AVMSSDYAIAQFR 904 (1191)
Q Consensus 859 g~~vl~iGDG-~ND~~ml~~AdvGI-~i-~g~e~~~----a~~~aD~vl~~f~ 904 (1191)
...++||||. ..|+.+=+++++-- .+ +|..... ....+|+++.++.
T Consensus 21 ~~~~~~VGD~~~~Di~~a~~~G~~~ilV~tG~~~~~~~~~~~~~pd~vv~~l~ 73 (75)
T PF13242_consen 21 PSRCVMVGDSLETDIEAAKAAGIDTILVLTGVYSPEDLEKAEHKPDYVVDDLK 73 (75)
T ss_dssp GGGEEEEESSTTTHHHHHHHTTSEEEEESSSSSCCCGHHHSSSTTSEEESSGG
T ss_pred HHHEEEEcCCcHhHHHHHHHcCCcEEEECCCCCCHHHHhccCCCCCEEECCHH
Confidence 3569999999 99999999998864 44 3332211 1257888887654
No 205
>TIGR00223 panD L-aspartate-alpha-decarboxylase. Members of this family are aspartate 1-decarboxylase, the enzyme that makes beta-alanine and C02 from aspartate. Beta-alanine is then used to make the vitamin pantothenate, from which coenzyme A is made. Aspartate 1-decarboxylase is synthesized as a proenzyme, then cleaved to an alpha (C-terminal) and beta (N-terminal) subunit with a pyruvoyl group.
Probab=31.64 E-value=82 Score=30.10 Aligned_cols=84 Identities=14% Similarity=0.256 Sum_probs=55.8
Q ss_pred CceEEecCCccHHHHHHHHHHcCcEEEeecCCeeEEEecCCCCccccceEEEEeEeecccCCCceEEEEEEcCCCcEEEE
Q 001008 537 GEISYEAESPDEAAFVIAAREVGFQFFGSSQTSISLHELDPVSGQKVNRVYELLHVLEFTSSRKRMSVMVRNPENQLLLL 616 (1191)
Q Consensus 537 ~~~~y~~~sp~e~Alv~~a~~~g~~~~~~~~~~~~i~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~ 616 (1191)
..+.|.++=..|..|+++|.- ..|+.+.+..-+..-+..+.++.-+.|.-.+-
T Consensus 18 a~L~Y~GSItID~~Lm~aagi---------------------------~p~E~V~V~Nv~NG~Rf~TYvI~G~~GSg~I~ 70 (126)
T TIGR00223 18 ANLNYEGSITIDEDLLDAAGI---------------------------LENEKVDIVNVNNGKRFSTYAIAGKRGSRIIC 70 (126)
T ss_pred cccccceeEEECHHHHHhcCC---------------------------CCCCEEEEEECCCCcEEEEEEEEcCCCCCEEE
Confidence 357788888889999987742 33444444555555555566666655555555
Q ss_pred EeccchHHHHHHhhcChhhHHHHHHHHHHHHhccceEEEEEEEecCHHHHHHH
Q 001008 617 CKGADSVMFERLSKHGQQFEAETRRHINRYAEAGLRTLVIAYRELGEDEYRIW 669 (1191)
Q Consensus 617 ~KGa~~~i~~~~~~~~~~~~~~~~~~l~~~a~~GlR~L~~A~r~l~~~~~~~~ 669 (1191)
.-||. ..+.+.|=|++..||-.++++|...|
T Consensus 71 lNGAA----------------------Arl~~~GD~VII~sy~~~~~~e~~~~ 101 (126)
T TIGR00223 71 VNGAA----------------------ARCVSVGDIVIIASYVTMPDEEARTH 101 (126)
T ss_pred eCCHH----------------------HhcCCCCCEEEEEECCcCCHHHHhcC
Confidence 56764 13356789999999999999876544
No 206
>PF13380 CoA_binding_2: CoA binding domain; PDB: 3FF4_A 2D5A_A 2D59_A 2E6U_X 1IUL_A 1IUK_A 1Y81_A 2DUW_A.
Probab=31.53 E-value=61 Score=30.89 Aligned_cols=38 Identities=29% Similarity=0.559 Sum_probs=29.4
Q ss_pred cCCcHHHHHHHHHcCC-eEEEEeCCCHhhHHHHHHHcCc
Q 001008 712 QKGVPECIDKLAQAGI-KVWVLTGDKMETAINIGYACSL 749 (1191)
Q Consensus 712 r~~v~~~I~~L~~aGI-kv~mlTGD~~~ta~~ia~~~gl 749 (1191)
.+.+++.++++.+.|+ .+|+.+|...+.+...|++.|+
T Consensus 65 ~~~~~~~v~~~~~~g~~~v~~~~g~~~~~~~~~a~~~gi 103 (116)
T PF13380_consen 65 PDKVPEIVDEAAALGVKAVWLQPGAESEELIEAAREAGI 103 (116)
T ss_dssp HHHHHHHHHHHHHHT-SEEEE-TTS--HHHHHHHHHTT-
T ss_pred HHHHHHHHHHHHHcCCCEEEEEcchHHHHHHHHHHHcCC
Confidence 4567899999999999 5899999999999999999887
No 207
>PRK05449 aspartate alpha-decarboxylase; Provisional
Probab=30.64 E-value=92 Score=29.86 Aligned_cols=84 Identities=15% Similarity=0.270 Sum_probs=56.2
Q ss_pred CceEEecCCccHHHHHHHHHHcCcEEEeecCCeeEEEecCCCCccccceEEEEeEeecccCCCceEEEEEEcCCCcEEEE
Q 001008 537 GEISYEAESPDEAAFVIAAREVGFQFFGSSQTSISLHELDPVSGQKVNRVYELLHVLEFTSSRKRMSVMVRNPENQLLLL 616 (1191)
Q Consensus 537 ~~~~y~~~sp~e~Alv~~a~~~g~~~~~~~~~~~~i~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~ 616 (1191)
..+.|.++=..|..|+++|. ...|+.+.+..-++..+..+.++.-+.|.-.+-
T Consensus 18 a~L~Y~GSitID~~Ll~aag---------------------------i~p~E~V~V~Nv~NG~Rf~TYvI~g~~GSg~I~ 70 (126)
T PRK05449 18 ADLNYEGSITIDEDLLDAAG---------------------------ILENEKVQIVNVNNGARFETYVIAGERGSGVIC 70 (126)
T ss_pred cccccceeEEECHHHHHhcC---------------------------CCCCCEEEEEECCCCcEEEEEEEEcCCCCCEEE
Confidence 35778888888999998764 233444444555555555566666665555555
Q ss_pred EeccchHHHHHHhhcChhhHHHHHHHHHHHHhccceEEEEEEEecCHHHHHHH
Q 001008 617 CKGADSVMFERLSKHGQQFEAETRRHINRYAEAGLRTLVIAYRELGEDEYRIW 669 (1191)
Q Consensus 617 ~KGa~~~i~~~~~~~~~~~~~~~~~~l~~~a~~GlR~L~~A~r~l~~~~~~~~ 669 (1191)
.-||. ..+.+.|=|++..||-.++++|...|
T Consensus 71 lNGAA----------------------Ar~~~~GD~vII~ay~~~~~~e~~~~ 101 (126)
T PRK05449 71 LNGAA----------------------ARLVQVGDLVIIAAYAQMDEEEAKTH 101 (126)
T ss_pred eCCHH----------------------HhcCCCCCEEEEEECccCCHHHHhcC
Confidence 56764 12356789999999999999876544
No 208
>cd02067 B12-binding B12 binding domain (B12-BD). This domain binds different cobalamid derivates, like B12 (adenosylcobamide) or methylcobalamin or methyl-Co(III) 5-hydroxybenzimidazolylcobamide, it is found in several enzymes, such as glutamate mutase, methionine synthase and methylmalonyl-CoA mutase. Cobalamin undergoes a conformational change on binding the protein; the dimethylbenzimidazole group, which is coordinated to the cobalt in the free cofactor, moves away from the corrin and is replaced by a histidine contributed by the protein. The sequence Asp-X-His-X-X-Gly, which contains this histidine ligand, is conserved in many cobalamin-binding proteins.
Probab=29.82 E-value=1.5e+02 Score=28.07 Aligned_cols=80 Identities=15% Similarity=0.232 Sum_probs=55.5
Q ss_pred HHHhccceEEEEEEEecCHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHHhhccceEEEeeeecccccCCcHHHHHHHHH
Q 001008 645 RYAEAGLRTLVIAYRELGEDEYRIWEKEFLKAKTSVTSDREALVASAAEKIERDLILLGATAVEDKLQKGVPECIDKLAQ 724 (1191)
Q Consensus 645 ~~a~~GlR~L~~A~r~l~~~~~~~~~~~~~~a~~~l~~~r~~~~~~~~~~iE~dl~llG~~~ieD~lr~~v~~~I~~L~~ 724 (1191)
-+...|++|+.+. ..++.+++.+ .-.+.+-.++|+....+.--+.+++.++.+|+
T Consensus 22 ~l~~~G~~V~~lg-~~~~~~~l~~------------------------~~~~~~pdvV~iS~~~~~~~~~~~~~i~~l~~ 76 (119)
T cd02067 22 ALRDAGFEVIDLG-VDVPPEEIVE------------------------AAKEEDADAIGLSGLLTTHMTLMKEVIEELKE 76 (119)
T ss_pred HHHHCCCEEEECC-CCCCHHHHHH------------------------HHHHcCCCEEEEeccccccHHHHHHHHHHHHH
Confidence 4567999998877 3355544322 12346778899988877777999999999999
Q ss_pred cCC-eE-EEEeCCCHhhHHHHHHHcCc
Q 001008 725 AGI-KV-WVLTGDKMETAINIGYACSL 749 (1191)
Q Consensus 725 aGI-kv-~mlTGD~~~ta~~ia~~~gl 749 (1191)
.+- ++ +++-|-........+++.|.
T Consensus 77 ~~~~~~~i~vGG~~~~~~~~~~~~~G~ 103 (119)
T cd02067 77 AGLDDIPVLVGGAIVTRDFKFLKEIGV 103 (119)
T ss_pred cCCCCCeEEEECCCCChhHHHHHHcCC
Confidence 976 44 66677544433456777776
No 209
>PF02261 Asp_decarbox: Aspartate decarboxylase; InterPro: IPR003190 Decarboxylation of aspartate is the major route of alanine production in bacteria, and is catalysed by the enzyme aspartate decarboxylase. The enzyme is translated as an inactive proenzyme of two chains, A and B. This family contains both chains of aspartate decarboxylase.; GO: 0004068 aspartate 1-decarboxylase activity, 0006523 alanine biosynthetic process; PDB: 1PYU_C 1AW8_A 1PYQ_B 3TM7_C 1PT1_A 1PQH_A 1PPY_B 1PT0_B 1PQF_A 1PQE_A ....
Probab=29.67 E-value=37 Score=31.94 Aligned_cols=83 Identities=17% Similarity=0.326 Sum_probs=49.4
Q ss_pred eEEecCCccHHHHHHHHHHcCcEEEeecCCeeEEEecCCCCccccceEEEEeEeecccCCCceEEEEEEcCCCcEEEEEe
Q 001008 539 ISYEAESPDEAAFVIAAREVGFQFFGSSQTSISLHELDPVSGQKVNRVYELLHVLEFTSSRKRMSVMVRNPENQLLLLCK 618 (1191)
Q Consensus 539 ~~y~~~sp~e~Alv~~a~~~g~~~~~~~~~~~~i~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~K 618 (1191)
+.|.++=..+..|+++|.-. .|+.+.+..-++.-+..+.++..+.|.-.+-.-
T Consensus 20 L~Y~GSitID~~Ll~aagi~---------------------------p~E~V~V~Nv~nG~Rf~TYvI~g~~GSg~I~lN 72 (116)
T PF02261_consen 20 LNYEGSITIDEDLLDAAGIL---------------------------PYEQVQVVNVNNGERFETYVIPGERGSGVICLN 72 (116)
T ss_dssp TTSTSCEEEEHHHHHHCT-----------------------------TTBEEEEEETTT--EEEEEEEEESTTTT-EEEE
T ss_pred cccceeeEECHHHHHHcCCC---------------------------cCCEEEEEECCCCcEEEEEEEEccCCCcEEEEC
Confidence 45666666788888876422 233344444555555566667666554455556
Q ss_pred ccchHHHHHHhhcChhhHHHHHHHHHHHHhccceEEEEEEEecCHHHHHHHH
Q 001008 619 GADSVMFERLSKHGQQFEAETRRHINRYAEAGLRTLVIAYRELGEDEYRIWE 670 (1191)
Q Consensus 619 Ga~~~i~~~~~~~~~~~~~~~~~~l~~~a~~GlR~L~~A~r~l~~~~~~~~~ 670 (1191)
||... +.+.|=+++.+||..++++|...|.
T Consensus 73 GaAAr----------------------l~~~GD~vII~sy~~~~~~e~~~~~ 102 (116)
T PF02261_consen 73 GAAAR----------------------LVQVGDRVIIMSYAQVDEEEAKNHK 102 (116)
T ss_dssp GGGGG----------------------CS-TT-EEEEEEEEEEEHHHHHH--
T ss_pred CHHHh----------------------ccCCCCEEEEEEcccCCHHHHhhCC
Confidence 77522 2456889999999999999877653
No 210
>TIGR01493 HAD-SF-IA-v2 Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase. The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single alignment is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only o
Probab=29.39 E-value=77 Score=32.30 Aligned_cols=33 Identities=9% Similarity=0.019 Sum_probs=24.2
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEeCCCHhhHHHHHHHcCc
Q 001008 710 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSL 749 (1191)
Q Consensus 710 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gl 749 (1191)
++.||+.++++ ++.++|.-+......+.+..|+
T Consensus 90 ~~~~g~~~~L~-------~~~i~Tn~~~~~~~~~l~~~~l 122 (175)
T TIGR01493 90 PPWPDSAAALA-------RVAILSNASHWAFDQFAQQAGL 122 (175)
T ss_pred CCCCchHHHHH-------HHhhhhCCCHHHHHHHHHHCCC
Confidence 47899999988 3677787777666666666665
No 211
>TIGR01501 MthylAspMutase methylaspartate mutase, S subunit. This model represents the S (sigma) subunit of methylaspartate mutase (glutamate mutase), a cobalamin-dependent enzyme that catalyzes the first step in a pathway of glutamate fermentation.
Probab=28.57 E-value=1.4e+02 Score=29.29 Aligned_cols=80 Identities=11% Similarity=0.135 Sum_probs=54.7
Q ss_pred HHHhccceEEEEEEEecCHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHHhhccceEEEeeeecccccCCcHHHHHHHHH
Q 001008 645 RYAEAGLRTLVIAYRELGEDEYRIWEKEFLKAKTSVTSDREALVASAAEKIERDLILLGATAVEDKLQKGVPECIDKLAQ 724 (1191)
Q Consensus 645 ~~a~~GlR~L~~A~r~l~~~~~~~~~~~~~~a~~~l~~~r~~~~~~~~~~iE~dl~llG~~~ieD~lr~~v~~~I~~L~~ 724 (1191)
.+...|++|+-++... +.+++ +....|.+-.++|+.++-=.--+..+++++.|++
T Consensus 24 ~l~~~GfeVi~LG~~v-~~e~~------------------------v~aa~~~~adiVglS~l~~~~~~~~~~~~~~l~~ 78 (134)
T TIGR01501 24 AFTNAGFNVVNLGVLS-PQEEF------------------------IKAAIETKADAILVSSLYGHGEIDCKGLRQKCDE 78 (134)
T ss_pred HHHHCCCEEEECCCCC-CHHHH------------------------HHHHHHcCCCEEEEecccccCHHHHHHHHHHHHH
Confidence 3567999999988543 33322 1123356888899988887777778999999999
Q ss_pred cCC--eEEEEeCCCH------hhHHHHHHHcCc
Q 001008 725 AGI--KVWVLTGDKM------ETAINIGYACSL 749 (1191)
Q Consensus 725 aGI--kv~mlTGD~~------~ta~~ia~~~gl 749 (1191)
+|+ .+|++-|-.. ..-..-++++|+
T Consensus 79 ~gl~~~~vivGG~~vi~~~d~~~~~~~l~~~Gv 111 (134)
T TIGR01501 79 AGLEGILLYVGGNLVVGKQDFPDVEKRFKEMGF 111 (134)
T ss_pred CCCCCCEEEecCCcCcChhhhHHHHHHHHHcCC
Confidence 987 5677877421 112345788885
No 212
>TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA. In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme.
Probab=27.89 E-value=4.3e+02 Score=25.25 Aligned_cols=95 Identities=17% Similarity=0.109 Sum_probs=47.9
Q ss_pred HHHHHHHHHHhccceEEEEEEEecCHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHHhhccceEEEeeeecccccCCcHH
Q 001008 638 ETRRHINRYAEAGLRTLVIAYRELGEDEYRIWEKEFLKAKTSVTSDREALVASAAEKIERDLILLGATAVEDKLQKGVPE 717 (1191)
Q Consensus 638 ~~~~~l~~~a~~GlR~L~~A~r~l~~~~~~~~~~~~~~a~~~l~~~r~~~~~~~~~~iE~dl~llG~~~ieD~lr~~v~~ 717 (1191)
...+.++.+...|+++.+++-+........ | .+.++...+.+.-...+....+ ...+|...-
T Consensus 29 ~v~~~l~~L~~~g~~l~i~Sn~~~~~~~~~-~---------------~~~~~~~l~~~~l~~~~~~~~~--~~~KP~~~~ 90 (132)
T TIGR01662 29 EVPDALAELKEAGYKVVIVTNQSGIGRGKF-S---------------SGRVARRLEELGVPIDVLYACP--HCRKPKPGM 90 (132)
T ss_pred CHHHHHHHHHHCCCEEEEEECCccccccHH-H---------------HHHHHHHHHHCCCCEEEEEECC--CCCCCChHH
Confidence 445567788889999988885432111000 0 1111112222211222222222 233443333
Q ss_pred HHHHHHHc-CCe--EEEEeCCCHhhHHHHHHHcCcc
Q 001008 718 CIDKLAQA-GIK--VWVLTGDKMETAINIGYACSLL 750 (1191)
Q Consensus 718 ~I~~L~~a-GIk--v~mlTGD~~~ta~~ia~~~gl~ 750 (1191)
....+++. ++. =++.=||+..+-+..|+++|+-
T Consensus 91 ~~~~~~~~~~~~~~~~v~IGD~~~~Di~~A~~~Gi~ 126 (132)
T TIGR01662 91 FLEALKRFNEIDPEESVYVGDQDLTDLQAAKRAGLA 126 (132)
T ss_pred HHHHHHHcCCCChhheEEEcCCCcccHHHHHHCCCe
Confidence 33344455 463 2566799777888999999983
No 213
>TIGR02230 ATPase_gene1 F0F1-ATPase subunit, putative. This model represents a protein found encoded in F1F0-ATPase operons in several genomes, including Methanosarcina barkeri (archaeal) and Chlorobium tepidum (bacterial). It is a small protein (about 100 amino acids) with long hydrophic stretches and is presumed to be a subunit of the enzyme.
Probab=27.73 E-value=1.7e+02 Score=27.02 Aligned_cols=62 Identities=15% Similarity=0.180 Sum_probs=34.3
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHhcCCCCCcchhHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHHHHH
Q 001008 1070 TWIQHFFIWGSIALWYIFLVVYGSLPPTFSTTAYKVLVEACAPSILYWLTTLLVVVSTLLPYFLYRAFQT 1139 (1191)
Q Consensus 1070 ~~~~~~~i~~si~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~s~~~wl~~l~~~~~~ll~~~i~k~~~~ 1139 (1191)
+.+....+++++...++...+...+. + .++...+.+...|..+++++.++....-+++++.+
T Consensus 37 ~~~~~l~~~g~IG~~~v~pil~G~~l---G-----~WLD~~~~t~~~~tl~~lllGv~~G~~n~w~wi~r 98 (100)
T TIGR02230 37 SIWEGLGMFGLIGWSVAIPTLLGVAV---G-----IWLDRHYPSPFSWTLTMLIVGVVIGCLNAWHWVSR 98 (100)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHH---H-----HHHHhhcCCCcHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 34555555555555544444433322 1 14445555555777777777777776666666654
No 214
>COG3700 AphA Acid phosphatase (class B) [General function prediction only]
Probab=27.65 E-value=1.6e+02 Score=30.06 Aligned_cols=38 Identities=13% Similarity=0.215 Sum_probs=27.3
Q ss_pred cCCcHHHHHHHHHcCCeEEEEeCCCHh----hHHHHHHHcCc
Q 001008 712 QKGVPECIDKLAQAGIKVWVLTGDKME----TAINIGYACSL 749 (1191)
Q Consensus 712 r~~v~~~I~~L~~aGIkv~mlTGD~~~----ta~~ia~~~gl 749 (1191)
++=+.+.|..-++.|=++..+||+..- ++...|+...|
T Consensus 116 KevA~qLI~MHq~RGD~i~FvTGRt~gk~d~vsk~Lak~F~i 157 (237)
T COG3700 116 KEVARQLIDMHQRRGDAIYFVTGRTPGKTDTVSKTLAKNFHI 157 (237)
T ss_pred HHHHHHHHHHHHhcCCeEEEEecCCCCcccccchhHHhhccc
Confidence 445567788888999999999998753 34455555555
No 215
>PF03120 DNA_ligase_OB: NAD-dependent DNA ligase OB-fold domain; InterPro: IPR004150 DNA ligases catalyse the crucial step of joining the breaks in duplex DNA during DNA replication, repair and recombination, utilizing either ATP or NAD(+) as a cofactor []. This family is a small domain found after the adenylation domain DNA_ligase_N in NAD+-dependent ligases (IPR001679 from INTERPRO). OB-fold domains generally are involved in nucleic acid binding.; GO: 0003911 DNA ligase (NAD+) activity, 0006260 DNA replication, 0006281 DNA repair; PDB: 2OWO_A 1TAE_A 3UQ8_A 1DGS_A 1V9P_B 3SGI_A.
Probab=27.07 E-value=34 Score=30.32 Aligned_cols=24 Identities=29% Similarity=0.443 Sum_probs=17.2
Q ss_pred EeccccccccEEEE-eCCCcccceE
Q 001008 152 TKWKNLRVGDLVKV-HKDEYFPADL 175 (1191)
Q Consensus 152 i~~~~L~vGDIV~l-~~ge~iPaD~ 175 (1191)
+.-.+|.+||.|.| +.||.||-=.
T Consensus 45 i~~~~i~~Gd~V~V~raGdVIP~I~ 69 (82)
T PF03120_consen 45 IKELDIRIGDTVLVTRAGDVIPKIV 69 (82)
T ss_dssp HHHTT-BBT-EEEEEEETTTEEEEE
T ss_pred HHHcCCCCCCEEEEEECCCccceEe
Confidence 34479999999988 7899999533
No 216
>TIGR02250 FCP1_euk FCP1-like phosphatase, phosphatase domain. This domain is related to domains found in the human NLI interacting factor-like phosphatases, and together both are detected by the Pfam model pfam03031.
Probab=26.64 E-value=97 Score=31.31 Aligned_cols=43 Identities=16% Similarity=0.018 Sum_probs=37.4
Q ss_pred ecccccCCcHHHHHHHHHcCCeEEEEeCCCHhhHHHHHHHcCcc
Q 001008 707 VEDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLL 750 (1191)
Q Consensus 707 ieD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gl~ 750 (1191)
..=++|||+.+.++.|++. +++.+.|.-....|..+.+.++.-
T Consensus 55 ~~v~~rPgv~efL~~l~~~-yel~I~T~~~~~yA~~vl~~ldp~ 97 (156)
T TIGR02250 55 YLTKLRPFLHEFLKEASKL-YEMHVYTMGTRAYAQAIAKLIDPD 97 (156)
T ss_pred EEEEECCCHHHHHHHHHhh-cEEEEEeCCcHHHHHHHHHHhCcC
Confidence 3446899999999999955 999999999999999999888764
No 217
>PF12689 Acid_PPase: Acid Phosphatase; InterPro: IPR010036 This entry represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterised as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues [, ].; GO: 0016791 phosphatase activity; PDB: 1U7P_A 1U7O_A 2WM8_A.
Probab=25.13 E-value=1.1e+02 Score=31.34 Aligned_cols=41 Identities=24% Similarity=0.285 Sum_probs=31.4
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEe-CCCHhhHHHHHHHcCcc
Q 001008 710 KLQKGVPECIDKLAQAGIKVWVLT-GDKMETAINIGYACSLL 750 (1191)
Q Consensus 710 ~lr~~v~~~I~~L~~aGIkv~mlT-GD~~~ta~~ia~~~gl~ 750 (1191)
.+-++|++.++.|++.|+++-++| -+.++.|..+-+.+++.
T Consensus 45 ~lypdv~~iL~~L~~~gv~lavASRt~~P~~A~~~L~~l~i~ 86 (169)
T PF12689_consen 45 SLYPDVPEILQELKERGVKLAVASRTDEPDWARELLKLLEID 86 (169)
T ss_dssp ---TTHHHHHHHHHHCT--EEEEE--S-HHHHHHHHHHTT-C
T ss_pred EeCcCHHHHHHHHHHCCCEEEEEECCCChHHHHHHHHhcCCC
Confidence 467999999999999999999999 58899999999999986
No 218
>PRK02261 methylaspartate mutase subunit S; Provisional
Probab=24.42 E-value=2.7e+02 Score=27.44 Aligned_cols=80 Identities=15% Similarity=0.172 Sum_probs=55.4
Q ss_pred HHHhccceEEEEEEEecCHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHHhhccceEEEeeeecccccCCcHHHHHHHHH
Q 001008 645 RYAEAGLRTLVIAYRELGEDEYRIWEKEFLKAKTSVTSDREALVASAAEKIERDLILLGATAVEDKLQKGVPECIDKLAQ 724 (1191)
Q Consensus 645 ~~a~~GlR~L~~A~r~l~~~~~~~~~~~~~~a~~~l~~~r~~~~~~~~~~iE~dl~llG~~~ieD~lr~~v~~~I~~L~~ 724 (1191)
.+...|++|+.++... +.+++. ..-.+.+-.++|+...--...+.+++.++.|++
T Consensus 26 ~lr~~G~eVi~LG~~v-p~e~i~------------------------~~a~~~~~d~V~lS~~~~~~~~~~~~~~~~L~~ 80 (137)
T PRK02261 26 ALTEAGFEVINLGVMT-SQEEFI------------------------DAAIETDADAILVSSLYGHGEIDCRGLREKCIE 80 (137)
T ss_pred HHHHCCCEEEECCCCC-CHHHHH------------------------HHHHHcCCCEEEEcCccccCHHHHHHHHHHHHh
Confidence 4567999999998543 333321 122346788999999888999999999999999
Q ss_pred cCC--eEEEEeCCC------HhhHHHHHHHcCc
Q 001008 725 AGI--KVWVLTGDK------METAINIGYACSL 749 (1191)
Q Consensus 725 aGI--kv~mlTGD~------~~ta~~ia~~~gl 749 (1191)
.|. ..|++-|-- ..-...-++++|+
T Consensus 81 ~~~~~~~i~vGG~~~~~~~~~~~~~~~l~~~G~ 113 (137)
T PRK02261 81 AGLGDILLYVGGNLVVGKHDFEEVEKKFKEMGF 113 (137)
T ss_pred cCCCCCeEEEECCCCCCccChHHHHHHHHHcCC
Confidence 955 245666643 2334467788885
No 219
>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B.
Probab=24.03 E-value=39 Score=35.03 Aligned_cols=30 Identities=33% Similarity=0.397 Sum_probs=25.4
Q ss_pred hHHHHHHHh------hcCCCEEEEEcCCccChHhhh
Q 001008 847 QKALVTRLV------KGTGKTTLAIGDGANDVGMLQ 876 (1191)
Q Consensus 847 qK~~iV~~l------~~~g~~vl~iGDG~ND~~ml~ 876 (1191)
.|...++.+ +.....++++|||.||++|||
T Consensus 157 ~K~~~l~~~~~~~~~~~~~~~~~~iGDs~~D~~~lr 192 (192)
T PF12710_consen 157 GKAEALKELYIRDEEDIDPDRVIAIGDSINDLPMLR 192 (192)
T ss_dssp HHHHHHHHHHHHHHHTHTCCEEEEEESSGGGHHHHH
T ss_pred cHHHHHHHHHHHhhcCCCCCeEEEEECCHHHHHHhC
Confidence 388888888 345689999999999999986
No 220
>PLN03064 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=24.00 E-value=1.4e+03 Score=30.48 Aligned_cols=36 Identities=14% Similarity=0.042 Sum_probs=27.7
Q ss_pred CCcHHHHHHHHHc-CCeEEEEeCCCHhhHHHHHHHcC
Q 001008 713 KGVPECIDKLAQA-GIKVWVLTGDKMETAINIGYACS 748 (1191)
Q Consensus 713 ~~v~~~I~~L~~a-GIkv~mlTGD~~~ta~~ia~~~g 748 (1191)
+++.++++.|.+. +-.|+++||+..+.....-..++
T Consensus 625 p~l~~~L~~L~~dp~n~VaIVSGR~~~~Le~~fg~~~ 661 (934)
T PLN03064 625 PELKEPLRALCSDPKTTIVVLSGSDRSVLDENFGEFD 661 (934)
T ss_pred HHHHHHHHHHHhCCCCeEEEEeCCCHHHHHHHhCCCC
Confidence 5667788888764 67899999999988877665443
No 221
>PF01479 S4: S4 domain; InterPro: IPR002942 Ribosomes are the particles that catalyse mRNA-directed protein synthesis in all organisms. The codons of the mRNA are exposed on the ribosome to allow tRNA binding. This leads to the incorporation of amino acids into the growing polypeptide chain in accordance with the genetic information. Incoming amino acid monomers enter the ribosomal A site in the form of aminoacyl-tRNAs complexed with elongation factor Tu (EF-Tu) and GTP. The growing polypeptide chain, situated in the P site as peptidyl-tRNA, is then transferred to aminoacyl-tRNA and the new peptidyl-tRNA, extended by one residue, is translocated to the P site with the aid the elongation factor G (EF-G) and GTP as the deacylated tRNA is released from the ribosome through one or more exit sites [, ]. About 2/3 of the mass of the ribosome consists of RNA and 1/3 of protein. The proteins are named in accordance with the subunit of the ribosome which they belong to - the small (S1 to S31) and the large (L1 to L44). Usually they decorate the rRNA cores of the subunits. Many ribosomal proteins, particularly those of the large subunit, are composed of a globular, surfaced-exposed domain with long finger-like projections that extend into the rRNA core to stabilise its structure. Most of the proteins interact with multiple RNA elements, often from different domains. In the large subunit, about 1/3 of the 23S rRNA nucleotides are at least in van der Waal's contact with protein, and L22 interacts with all six domains of the 23S rRNA. Proteins S4 and S7, which initiate assembly of the 16S rRNA, are located at junctions of five and four RNA helices, respectively. In this way proteins serve to organise and stabilise the rRNA tertiary structure. While the crucial activities of decoding and peptide transfer are RNA based, proteins play an active role in functions that may have evolved to streamline the process of protein synthesis. In addition to their function in the ribosome, many ribosomal proteins have some function 'outside' the ribosome [, ]. The S4 domain is a small domain consisting of 60-65 amino acid residues that was detected in the bacterial ribosomal protein S4, eukaryotic ribosomal S9, two families of pseudouridine synthases, a novel family of predicted RNA methylases, a yeast protein containing a pseudouridine synthetase and a deaminase domain, bacterial tyrosyl-tRNA synthetases, and a number of uncharacterised, small proteins that may be involved in translation regulation []. The S4 domain probably mediates binding to RNA.; GO: 0003723 RNA binding; PDB: 3BBU_A 1DM9_B 2K6P_A 3U5G_E 3U5C_E 3IZB_D 2XZM_D 2XZN_D 3O30_E 3O2Z_E ....
Probab=23.96 E-value=67 Score=24.88 Aligned_cols=33 Identities=21% Similarity=0.285 Sum_probs=26.0
Q ss_pred HhhhHHHHhcceEEEEecCCeEEEEeccccccccEE
Q 001008 128 RRKQDIEANNRKVKVYGQDHTFVETKWKNLRVGDLV 163 (1191)
Q Consensus 128 r~k~~~~~n~~~~~V~r~~g~~~~i~~~~L~vGDIV 163 (1191)
|..+.+-+....++| ||+...-+...+.+||+|
T Consensus 16 r~~a~~~I~~g~V~V---Ng~~v~~~~~~v~~~d~I 48 (48)
T PF01479_consen 16 RSEARRLIKQGRVKV---NGKVVKDPSYIVKPGDVI 48 (48)
T ss_dssp HHHHHHHHHTTTEEE---TTEEESSTTSBESTTEEE
T ss_pred HHHHHHhcCCCEEEE---CCEEEcCCCCCCCCcCCC
Confidence 344455566777776 999999999999999987
No 222
>TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit. Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps.
Probab=23.89 E-value=3.1e+02 Score=36.89 Aligned_cols=125 Identities=15% Similarity=0.031 Sum_probs=69.0
Q ss_pred CCeEEEEeccccccccEEEEeCCCcccceEEEEeeeCCCceEEEEeccCCcccccEeecchhhhcccCChhhhcccceEE
Q 001008 146 DHTFVETKWKNLRVGDLVKVHKDEYFPADLLLLSSIYEDGICYVETMNLDGETNLKLKRSLEATNHLRDEESFQKFTAVI 225 (1191)
Q Consensus 146 ~g~~~~i~~~~L~vGDIV~l~~ge~iPaD~~lL~ss~~~g~~~Vd~s~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~~~i 225 (1191)
-|....+...|..|.|.+.++.+. +.++.|.-+|...--+..- |.+. ..+.+.
T Consensus 161 ~GDiv~l~~Gd~IPaD~~il~~~~------l~VdeS~LTGES~pv~K~~-~~~~---~~~~~~----------------- 213 (997)
T TIGR01106 161 VGDLVEVKGGDRIPADLRIISAQG------CKVDNSSLTGESEPQTRSP-EFTH---ENPLET----------------- 213 (997)
T ss_pred CCCEEEECCCCEEeeeEEEEEccC------cEEEccccCCCCCceeccC-CCcc---cCcccc-----------------
Confidence 689999999999999999998652 2233333234322212211 1110 011110
Q ss_pred EeecCCCCceeeEEEEEEcCeeeccCCCceeecCcEeecCCeEEEEEEEecchhhHhhccCCC-CCCCCHHHHHHHHHHH
Q 001008 226 KCEDPNERLYSFVGTLQYEGKQYPLSPQQILLRDSKLKNTDYVYGVVVFTGHDTKVMQNATDP-PSKRSKIERKMDKIVY 304 (1191)
Q Consensus 226 ~~e~pn~~~~~f~Gt~~~~g~~~~l~~~n~l~rgs~l~nt~~~~gvVv~tG~~Tki~~~~~~~-~~k~s~l~~~~~~~~~ 304 (1191)
. ...|+||.+++|... |-.+ ..|-=++.|.-.+........ ..-...+++..+.++.
T Consensus 214 ----~---n~l~~Gt~v~~G~~~----------~~V~-----~tG~~T~~g~i~~~~~~~~~~~~pl~~~~~~~~~~~~~ 271 (997)
T TIGR01106 214 ----R---NIAFFSTNCVEGTAR----------GIVV-----NTGDRTVMGRIASLASGLENGKTPIAIEIEHFIHIITG 271 (997)
T ss_pred ----C---CeEEeccEeeeeeEE----------EEEE-----EccccchhhHHHhhhhhcccCCCcHHHHHHHHHHHHHH
Confidence 0 145999999988621 1111 234445667666655554332 2224677888888877
Q ss_pred HHHHHHHHHHHHHHH
Q 001008 305 LLFSTLILISSTGSV 319 (1191)
Q Consensus 305 ~~~~~~~~~~~i~~i 319 (1191)
+.+++.++++++..+
T Consensus 272 ~~~~~~~~~~~~~~~ 286 (997)
T TIGR01106 272 VAVFLGVSFFILSLI 286 (997)
T ss_pred HHHHHHHHHHHHHHH
Confidence 766655555555433
No 223
>COG0522 RpsD Ribosomal protein S4 and related proteins [Translation, ribosomal structure and biogenesis]
Probab=23.43 E-value=93 Score=32.94 Aligned_cols=39 Identities=15% Similarity=0.112 Sum_probs=30.6
Q ss_pred HHHHhcceEEEEecCCeEEEEeccccccccEEEEeCCCcccc
Q 001008 132 DIEANNRKVKVYGQDHTFVETKWKNLRVGDLVKVHKDEYFPA 173 (1191)
Q Consensus 132 ~~~~n~~~~~V~r~~g~~~~i~~~~L~vGDIV~l~~ge~iPa 173 (1191)
-+-++...+.| ||+.+.+|+-.|.+||.|.|..-..-|.
T Consensus 113 RQlV~HGHI~V---nGk~V~iPSy~V~~gdei~V~~k~~s~~ 151 (205)
T COG0522 113 RQLVSHGHILV---NGKRVNIPSYLVSPGDEISVREKSKSPI 151 (205)
T ss_pred HHHhhcceEEE---CCEEeccCcEEecCCCEEEeeecccchh
Confidence 34445666665 9999999999999999999987665543
No 224
>PF09586 YfhO: Bacterial membrane protein YfhO; InterPro: IPR018580 The yfhO gene is transcribed in Difco sporulation medium and the transcription is affected by the YvrGHb two-component system []. Some members of this family have been annotated as putative ABC transporter permease proteins.
Probab=23.38 E-value=1.2e+03 Score=30.70 Aligned_cols=29 Identities=28% Similarity=0.539 Sum_probs=18.1
Q ss_pred cccccchhHHHHHHHHHHhhhhhHHhhhcc
Q 001008 948 FSGRPAYNDWYMSCYNVFFTSLPVIALGVF 977 (1191)
Q Consensus 948 ~s~~~~~~~~~~l~~n~~~~~~p~~~l~~~ 977 (1191)
|+|-.++......|.+.+ ..+|.+++|++
T Consensus 132 fsg~~~~~~~~~~fld~~-i~lPL~llgie 160 (843)
T PF09586_consen 132 FSGYVIYYSFNIMFLDAM-ILLPLLLLGIE 160 (843)
T ss_pred HHHHHHHHhhhHHHHHHH-HHHHHHHHHHH
Confidence 334344445556676654 46899999874
No 225
>PTZ00413 lipoate synthase; Provisional
Probab=23.27 E-value=7.8e+02 Score=28.83 Aligned_cols=55 Identities=22% Similarity=0.296 Sum_probs=38.6
Q ss_pred hhccceEEEeeee-cccccCC----cHHHHHHHHHc--CCeEEEEeCCC--HhhHHHHHHHcCc
Q 001008 695 IERDLILLGATAV-EDKLQKG----VPECIDKLAQA--GIKVWVLTGDK--METAINIGYACSL 749 (1191)
Q Consensus 695 iE~dl~llG~~~i-eD~lr~~----v~~~I~~L~~a--GIkv~mlTGD~--~~ta~~ia~~~gl 749 (1191)
-+.++.+.=++.. +|.|.++ ..++|+.+|+. ++.+.+++||- ..-+...-.+.|+
T Consensus 190 ~~~Gl~~~VVTSv~RDDL~D~ga~~~a~~I~~Ir~~~p~~~IevligDf~g~~e~l~~L~eAG~ 253 (398)
T PTZ00413 190 AEMGVDYIVMTMVDRDDLPDGGASHVARCVELIKESNPELLLEALVGDFHGDLKSVEKLANSPL 253 (398)
T ss_pred HHcCCCEEEEEEEcCCCCChhhHHHHHHHHHHHHccCCCCeEEEcCCccccCHHHHHHHHhcCC
Confidence 3456777767777 5777664 57889999984 79999999987 3334445555565
No 226
>COG1230 CzcD Co/Zn/Cd efflux system component [Inorganic ion transport and metabolism]
Probab=23.05 E-value=1.1e+03 Score=26.54 Aligned_cols=28 Identities=14% Similarity=0.021 Sum_probs=22.2
Q ss_pred HhhHhHHHHHHhHHHHHHHHHHHHhhhc
Q 001008 920 RISMMICYFFYKNLTFGFTLFWYEAYAS 947 (1191)
Q Consensus 920 ~i~~~i~~~~~~n~~~~~~~~~~~~~~~ 947 (1191)
+.++.+.+.+.-|..+.+..+++++.++
T Consensus 19 ~~~r~l~~~~~L~~~f~~iE~i~g~~s~ 46 (296)
T COG1230 19 RNERRLLIALLLNLAFMLIEIIGGLLTG 46 (296)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 4566677888888999999999888764
No 227
>PRK08508 biotin synthase; Provisional
Probab=22.53 E-value=5.5e+02 Score=28.67 Aligned_cols=37 Identities=22% Similarity=0.122 Sum_probs=26.0
Q ss_pred cHHHHHHHHHcCCe-EE------------EEeCCCHhh---HHHHHHHcCccc
Q 001008 715 VPECIDKLAQAGIK-VW------------VLTGDKMET---AINIGYACSLLR 751 (1191)
Q Consensus 715 v~~~I~~L~~aGIk-v~------------mlTGD~~~t---a~~ia~~~gl~~ 751 (1191)
.++.++.|++||+. +- +.||...+- ++..|+++|+-.
T Consensus 101 ~~e~l~~Lk~aGld~~~~~lEt~~~~~~~i~~~~~~~~~l~~i~~a~~~Gi~v 153 (279)
T PRK08508 101 SVEQLKELKKAGIFSYNHNLETSKEFFPKICTTHTWEERFQTCENAKEAGLGL 153 (279)
T ss_pred CHHHHHHHHHcCCCEEcccccchHHHhcCCCCCCCHHHHHHHHHHHHHcCCee
Confidence 48999999999983 32 456665555 445688999743
No 228
>TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA. Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant.
Probab=22.50 E-value=1.3e+02 Score=32.60 Aligned_cols=47 Identities=21% Similarity=0.198 Sum_probs=33.5
Q ss_pred EeeeecccccCCcHHHHHHHHHcCCeEEEEe---CCCHhhHHHHHHH-cCc
Q 001008 703 GATAVEDKLQKGVPECIDKLAQAGIKVWVLT---GDKMETAINIGYA-CSL 749 (1191)
Q Consensus 703 G~~~ieD~lr~~v~~~I~~L~~aGIkv~mlT---GD~~~ta~~ia~~-~gl 749 (1191)
|++.-.+.+=+++.++|+.++++|++++++| |.........-.+ .|+
T Consensus 7 GvL~~~~~~~~~a~e~i~~l~~~g~~~~~~tN~~~~~~~~~~~~l~~~~g~ 57 (236)
T TIGR01460 7 GVLWLGHKPIPGAAEALNRLRAKGKPVVFLTNNSSRSEEDYAEKLSSLLGV 57 (236)
T ss_pred CccCcCCccCcCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHhcCC
Confidence 4444456667799999999999999999999 5555544443333 555
No 229
>PRK10517 magnesium-transporting ATPase MgtA; Provisional
Probab=22.22 E-value=2.6e+02 Score=37.04 Aligned_cols=113 Identities=11% Similarity=0.066 Sum_probs=70.3
Q ss_pred HHHHHHH-HHHHHHHHHHHHHHhcccCCcCCCc-hhhHHHHHHHHHHHHHHHHHHHHHhhhHHHHhcceEEEEecCCeEE
Q 001008 73 KSLFEQF-RRVANIYFLVVAFVSFSPLAPYSAP-SVLAPLIVVIGATMAKEGVEDWRRRKQDIEANNRKVKVYGQDHTFV 150 (1191)
Q Consensus 73 ~~l~~qf-~~~~n~~fl~~~il~~~~~~~~~~~-~~~~~l~~vl~~~~i~~~~~d~~r~k~~~~~n~~~~~V~r~~g~~~ 150 (1191)
+.+|..| +.+.+.+.++..+...+ .+. ..+.--++++++..+...++.++.+|+.+.+..-+-.. . . ..
T Consensus 91 ~s~~~~~~~~~~~p~~~lL~~aa~l-----s~~~~~~~~a~~I~~iv~i~~~i~~~qe~ra~~~~~~L~~l~-~-~--~a 161 (902)
T PRK10517 91 LPWWVHLWVCYRNPFNILLTILGAI-----SYATEDLFAAGVIALMVAISTLLNFIQEARSTKAADALKAMV-S-N--TA 161 (902)
T ss_pred CCHHHHHHHHHHhHHHHHHHHHHHH-----HHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhC-C-C--eE
Confidence 3455555 44666666665555554 232 23344456677778889999999999998887754322 1 1 12
Q ss_pred EEeccccc---cccEEEEeCCCcccceEEEEeeeCCCceEEEEeccCCccc
Q 001008 151 ETKWKNLR---VGDLVKVHKDEYFPADLLLLSSIYEDGICYVETMNLDGET 198 (1191)
Q Consensus 151 ~i~~~~L~---vGDIV~l~~ge~iPaD~~lL~ss~~~g~~~Vd~s~LtGEs 198 (1191)
.|-. +-. -|....|...|.+|-|.++++.-+ .+-+|=-.+.|+.
T Consensus 162 ~ViR-~g~~~~~g~~~~I~~~eLvpGDiV~l~~Gd---~IPaDg~li~g~~ 208 (902)
T PRK10517 162 TVLR-VINDKGENGWLEIPIDQLVPGDIIKLAAGD---MIPADLRILQARD 208 (902)
T ss_pred EEEE-CCccCCCCeEEEEEHHhCCCCCEEEECCCC---EEeeeEEEEEcCc
Confidence 2221 111 167899999999999999998543 3555555555544
No 230
>PF14362 DUF4407: Domain of unknown function (DUF4407)
Probab=22.19 E-value=3.5e+02 Score=30.61 Aligned_cols=15 Identities=13% Similarity=0.140 Sum_probs=8.6
Q ss_pred hcCCChHHHHHHHHH
Q 001008 1140 RFRPMYHDLIQRQRL 1154 (1191)
Q Consensus 1140 ~~~P~~~~i~~e~~~ 1154 (1191)
.|.++..+.+.|+..
T Consensus 105 iF~~eI~~~l~~~~~ 119 (301)
T PF14362_consen 105 IFEKEIDQKLDEIRQ 119 (301)
T ss_pred HHHHHHHHHHHHHHH
Confidence 455666666666543
No 231
>PF13275 S4_2: S4 domain; PDB: 1P9K_A.
Probab=21.75 E-value=47 Score=28.01 Aligned_cols=23 Identities=30% Similarity=0.482 Sum_probs=12.5
Q ss_pred CCeEEEEeccccccccEEEEeCCC
Q 001008 146 DHTFVETKWKNLRVGDLVKVHKDE 169 (1191)
Q Consensus 146 ~g~~~~i~~~~L~vGDIV~l~~ge 169 (1191)
||+.+.-.-..|++||+|.+ .|+
T Consensus 38 NGe~e~rrg~Kl~~GD~V~~-~~~ 60 (65)
T PF13275_consen 38 NGEVETRRGKKLRPGDVVEI-DGE 60 (65)
T ss_dssp TTB----SS----SSEEEEE-TTE
T ss_pred CCEEccccCCcCCCCCEEEE-CCE
Confidence 88888888899999999999 443
No 232
>smart00831 Cation_ATPase_N Cation transporter/ATPase, N-terminus. This entry represents the conserved N-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+, Na+, Ca2+, Na+/K+, and H+/K+. In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. In gastric H+/K+-ATPases, this domain undergoes reversible sequential phosphorylation inducing conformational changes that may be important for regulating the function of these ATPases PUBMED:12480547, PUBMED:12529322.
Probab=21.72 E-value=2.3e+02 Score=23.35 Aligned_cols=39 Identities=23% Similarity=0.274 Sum_probs=27.5
Q ss_pred HhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001008 281 VMQNATDPPSKRSKIERKMDKIVYLLFSTLILISSTGSV 319 (1191)
Q Consensus 281 i~~~~~~~~~k~s~l~~~~~~~~~~~~~~~~~~~~i~~i 319 (1191)
.+.|.-..+.+++.+.+.++.+...+.+++++.++++++
T Consensus 23 ~G~N~l~~~~~~s~~~~~l~~~~~p~~~iL~~~a~is~~ 61 (64)
T smart00831 23 YGPNELPPPKKRSPLLRFLRQFHNPLIYILLAAAVLSAL 61 (64)
T ss_pred hCCCCCCCCCCCCHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 356655566668889998888877777766666666544
No 233
>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=21.52 E-value=6.7e+02 Score=28.38 Aligned_cols=63 Identities=17% Similarity=0.189 Sum_probs=39.4
Q ss_pred EEcCChhhHHHHHHHh--hcCCCEEEEEcCCcc-C---hHhhhhcceeEEeccC---ccchhhhccceeccc
Q 001008 840 CCRSSPKQKALVTRLV--KGTGKTTLAIGDGAN-D---VGMLQEADIGVGISGV---EGMQAVMSSDYAIAQ 902 (1191)
Q Consensus 840 ~~r~sP~qK~~iV~~l--~~~g~~vl~iGDG~N-D---~~ml~~AdvGI~i~g~---e~~~a~~~aD~vl~~ 902 (1191)
|.-+||.-=.++++.. .-.|+.++.||-|.. = +.+|..++..+.+..+ +..++...||+++.-
T Consensus 138 ~~PcTp~aii~lL~~~~i~l~Gk~V~vIG~s~ivG~PmA~~L~~~gatVtv~~~~t~~l~e~~~~ADIVIsa 209 (301)
T PRK14194 138 LTPCTPSGCLRLLEDTCGDLTGKHAVVIGRSNIVGKPMAALLLQAHCSVTVVHSRSTDAKALCRQADIVVAA 209 (301)
T ss_pred CCCCcHHHHHHHHHHhCCCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEECCCCCCHHHHHhcCCEEEEe
Confidence 4456665544444444 235899999999733 2 4467777777755322 233356789999874
No 234
>TIGR00640 acid_CoA_mut_C methylmalonyl-CoA mutase C-terminal domain. Methylmalonyl-CoA mutase (EC 5.4.99.2) catalyzes a reversible isomerization between L-methylmalonyl-CoA and succinyl-CoA. The enzyme uses an adenosylcobalamin cofactor. It may be a homodimer, as in mitochondrion, or a heterodimer with partially homologous beta chain that does not bind the adenosylcobalamin cofactor, as in Propionibacterium freudenreichii. The most similar archaeal sequences are separate chains, such as AF2215 and AF2219 of Archaeoglobus fulgidus, that correspond roughly to the first 500 and last 130 residues, respectively of known methylmalonyl-CoA mutases. This model describes the C-terminal domain subfamily. In a neighbor-joining tree (methylaspartate mutase S chain as the outgroup), AF2219 branches with a coenzyme B12-dependent enzyme known not to be 5.4.99.2.
Probab=21.48 E-value=2.5e+02 Score=27.48 Aligned_cols=80 Identities=19% Similarity=0.206 Sum_probs=56.8
Q ss_pred HHHhccceEEEEEEEecCHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHHhhccceEEEeeeecccccCCcHHHHHHHHH
Q 001008 645 RYAEAGLRTLVIAYRELGEDEYRIWEKEFLKAKTSVTSDREALVASAAEKIERDLILLGATAVEDKLQKGVPECIDKLAQ 724 (1191)
Q Consensus 645 ~~a~~GlR~L~~A~r~l~~~~~~~~~~~~~~a~~~l~~~r~~~~~~~~~~iE~dl~llG~~~ieD~lr~~v~~~I~~L~~ 724 (1191)
.+...|+.|+-.... .+.+++ +....|.+-..+|+.++-..--+.+++.++.|++
T Consensus 25 ~l~~~GfeVi~lg~~-~s~e~~------------------------v~aa~e~~adii~iSsl~~~~~~~~~~~~~~L~~ 79 (132)
T TIGR00640 25 AYADLGFDVDVGPLF-QTPEEI------------------------ARQAVEADVHVVGVSSLAGGHLTLVPALRKELDK 79 (132)
T ss_pred HHHhCCcEEEECCCC-CCHHHH------------------------HHHHHHcCCCEEEEcCchhhhHHHHHHHHHHHHh
Confidence 467899999987743 233332 1233457889999999999999999999999999
Q ss_pred cCC-eE-EEEeCCCHhhHHHHHHHcCc
Q 001008 725 AGI-KV-WVLTGDKMETAINIGYACSL 749 (1191)
Q Consensus 725 aGI-kv-~mlTGD~~~ta~~ia~~~gl 749 (1191)
+|. .+ +|+-|-.+..-..--+++|+
T Consensus 80 ~g~~~i~vivGG~~~~~~~~~l~~~Gv 106 (132)
T TIGR00640 80 LGRPDILVVVGGVIPPQDFDELKEMGV 106 (132)
T ss_pred cCCCCCEEEEeCCCChHhHHHHHHCCC
Confidence 986 33 55555444444555777887
No 235
>PF04341 DUF485: Protein of unknown function, DUF485; InterPro: IPR007436 This family includes several putative integral membrane proteins.
Probab=21.22 E-value=1.6e+02 Score=26.77 Aligned_cols=72 Identities=15% Similarity=0.221 Sum_probs=34.4
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCcchhHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHHHHHh-cCCChHHHHHH
Q 001008 1074 HFFIWGSIALWYIFLVVYGSLPPTFSTTAYKVLVEACAPSILYWLTTLLVVVSTLLPYFLYRAFQTR-FRPMYHDLIQR 1151 (1191)
Q Consensus 1074 ~~~i~~si~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~s~~~wl~~l~~~~~~ll~~~i~k~~~~~-~~P~~~~i~~e 1151 (1191)
.......++.++.+.++..+.|..++...+. . ..+.. |+..++..+++++...++-..-+. |-|...++.+|
T Consensus 19 ~~l~~i~l~~y~~~~ll~a~~p~~m~~~v~~----G-~~t~g-~~~g~~~~~~~~~l~~~Yv~~An~~~D~l~~~i~~e 91 (91)
T PF04341_consen 19 WPLSAIFLVLYFGFVLLSAFAPELMATPVFP----G-SLTLG-IVLGLGQIVFAWVLTWLYVRRANREFDPLARAIREE 91 (91)
T ss_pred HHHHHHHHHHHHHHHHHHHHCHHHHcCcccC----C-CcCHH-HHHHHHHHHHHHHHHHHHHHHHccccCHHHHHHHhC
Confidence 3445556677777777777776543332110 0 12222 333333444455555554433333 55555555544
No 236
>PRK11507 ribosome-associated protein; Provisional
Probab=20.30 E-value=99 Score=26.51 Aligned_cols=22 Identities=18% Similarity=0.157 Sum_probs=19.9
Q ss_pred CCeEEEEeccccccccEEEEeC
Q 001008 146 DHTFVETKWKNLRVGDLVKVHK 167 (1191)
Q Consensus 146 ~g~~~~i~~~~L~vGDIV~l~~ 167 (1191)
||+...-.-..|++||+|.+..
T Consensus 42 NGeve~rRgkKl~~GD~V~~~g 63 (70)
T PRK11507 42 DGAVETRKRCKIVAGQTVSFAG 63 (70)
T ss_pred CCEEecccCCCCCCCCEEEECC
Confidence 8999999999999999999854
No 237
>PF14802 TMEM192: TMEM192 family
Probab=20.04 E-value=1.1e+03 Score=25.51 Aligned_cols=77 Identities=18% Similarity=0.146 Sum_probs=35.6
Q ss_pred cCHhHHHHHHH----HHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHh--cCccccccc--cccccCCChhhHHHHHHHH
Q 001008 1112 PSILYWLTTLL----VVVSTLLPYFLYRAFQTRFRPMYHDLIQRQRLE--GSETEISSQ--TEVSSELPAQVEIKMQHLK 1183 (1191)
Q Consensus 1112 ~s~~~wl~~l~----~~~~~ll~~~i~k~~~~~~~P~~~~i~~e~~~~--~~~~~~~~~--~~~~~~~~~~~~~~~~~~~ 1183 (1191)
.++..++.++. ++++++...++.|..+-.-...+.|+.+|-... ....+.... -.-+.++++.+| |+-++=
T Consensus 140 ls~~~~l~i~~~lE~~~~~~~~i~Yiv~V~kFN~~~~~PDv~~~~~~~~~~~~~~~~~e~g~r~~~~~eellE-kQadlI 218 (236)
T PF14802_consen 140 LSPQLYLQILCSLELLVLLPFLIIYIVKVRKFNKARPPPDVLREEYSRSYLYPSSSSSELGFRDGSSLEELLE-KQADLI 218 (236)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCchhhhccccCCCCCCccccCCcCCCCHHHHHH-HHHHHH
Confidence 56666666655 333444444554544433334455566655441 111111111 133445565666 665544
Q ss_pred Hhhhhc
Q 001008 1184 ANLRQR 1189 (1191)
Q Consensus 1184 ~~~~~~ 1189 (1191)
+-|+|-
T Consensus 219 ~yLk~h 224 (236)
T PF14802_consen 219 RYLKEH 224 (236)
T ss_pred HHHHHH
Confidence 444443
Done!