Citrus Sinensis ID: 001010
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
ID ![]() | Alignment graph ![]() | Length ![]() |
Definition ![]() |
RBH(Q2H) ![]() |
RBH(H2Q) ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 1191 | 2.2.26 [Sep-21-2011] | |||||||
| Q9LT02 | 1179 | Probable cation-transport | yes | no | 0.984 | 0.994 | 0.786 | 0.0 | |
| Q9HD20 | 1204 | Probable cation-transport | yes | no | 0.872 | 0.862 | 0.440 | 0.0 | |
| Q9EPE9 | 1200 | Probable cation-transport | yes | no | 0.874 | 0.868 | 0.438 | 0.0 | |
| P90747 | 1178 | Probable cation-transport | yes | no | 0.942 | 0.953 | 0.419 | 0.0 | |
| O14072 | 1211 | Cation-transporting ATPas | yes | no | 0.951 | 0.935 | 0.406 | 0.0 | |
| P39986 | 1215 | Probable cation-transport | yes | no | 0.948 | 0.930 | 0.410 | 0.0 | |
| O74431 | 1315 | Probable cation-transport | no | no | 0.533 | 0.482 | 0.299 | 7e-83 | |
| Q12697 | 1472 | Vacuolar cation-transport | no | no | 0.531 | 0.430 | 0.287 | 6e-79 | |
| Q5XF89 | 1219 | Probable cation-transport | no | no | 0.531 | 0.519 | 0.299 | 8e-76 | |
| Q9H7F0 | 1226 | Probable cation-transport | no | no | 0.534 | 0.518 | 0.298 | 4e-74 |
| >sp|Q9LT02|ATY1_ARATH Probable cation-transporting ATPase OS=Arabidopsis thaliana GN=At5g23630 PE=2 SV=1 | Back alignment and function desciption |
|---|
Score = 1930 bits (5000), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 938/1192 (78%), Positives = 1029/1192 (86%), Gaps = 19/1192 (1%)
Query: 1 MLSFHVGGKVVDRVDLLRKKHWVWRLDVWPFAILYSGWLIAIVPSIDFGDAAIVLGGLVA 60
M SF VGGKVV++VDL RKK VWRLDVWPFAILY+ WL IVPSIDF DA I LGGL A
Sbjct: 1 MSSFRVGGKVVEKVDLCRKKQLVWRLDVWPFAILYTVWLTTIVPSIDFSDACIALGGLSA 60
Query: 61 FHILVWLFTAWSVDFKCFAHYSKINDIHLADACKITPVKFCGSKEVVPLQFWKQSAVSST 120
FHILV LFT WSVDFKCF +SK+N I ADACK+TP KF GSKEVVPL F Q S++
Sbjct: 61 FHILVLLFTTWSVDFKCFVQFSKVNSIDQADACKVTPAKFSGSKEVVPLHFRSQMTDSAS 120
Query: 121 PVDEDEICFDFRKQHFIYSREKGTFCKLPYPTKETFGYYLKCTGHSTEAKIAVATEKWGR 180
D +EI FDFRKQ FIYS+E G F KLPYPTKETFG+YLKCTGH TEAKIA ATEKWGR
Sbjct: 121 SGDMEEIFFDFRKQRFIYSKELGAFSKLPYPTKETFGHYLKCTGHGTEAKIATATEKWGR 180
Query: 181 NVFEYPQPTFQKLMKENCMEPFFVFQVFCVGLWCLDEYWYYSLFTLFMLFMFESTMAKSR 240
NVF+YPQPTFQKLMKENCMEPFFVFQVFCVGLWCLDE+WYYS+FTLFMLFMFESTMAKSR
Sbjct: 181 NVFDYPQPTFQKLMKENCMEPFFVFQVFCVGLWCLDEFWYYSVFTLFMLFMFESTMAKSR 240
Query: 241 LKTLTEIRRVRVDNQTIMVHRCGKWVKLAGTDLVPGDVVSIGRSSGQTG-EDKSVPADML 299
LKTLT++R VRVD+QT+MV+R GKWVKL GTDL+PGDVVSIGR S QTG EDK+VPADML
Sbjct: 241 LKTLTDLRSVRVDSQTVMVYRSGKWVKLLGTDLLPGDVVSIGRPSTQTGGEDKTVPADML 300
Query: 300 ILGGSAIVNEAILTGESTPQWKVSIMGRETGEKLSARRDKSHVLFGGTKILQHTPDKTFP 359
+L GSAIVNEAILTGESTPQWKV I+G+ + EKLS +R+K+HVLFGGTKILQH+PDK+F
Sbjct: 301 LLVGSAIVNEAILTGESTPQWKVPIVGQRSDEKLSIKRNKNHVLFGGTKILQHSPDKSFS 360
Query: 360 LKTPDGGCLAVVLRTGFETSQGKLMRTILFSTERVTANSWESGLFILFLVVFAVIAAGYV 419
LKTPDGGCLAVVLRTGFETSQGKLMRTILFSTERVTANSWESGLFILFLVVFAVIAAGYV
Sbjct: 361 LKTPDGGCLAVVLRTGFETSQGKLMRTILFSTERVTANSWESGLFILFLVVFAVIAAGYV 420
Query: 420 LKKGMEDPTRSKYKLFLSCSLIITSVIPPELPMELSIAVNTSLIALARRGIFCTEPFRIP 479
L KG+EDPTRSKYKL L CSLIITSVIPPELPMELSIAVNTSL+AL RRGIFCTEPFRIP
Sbjct: 421 LVKGLEDPTRSKYKLLLGCSLIITSVIPPELPMELSIAVNTSLLALVRRGIFCTEPFRIP 480
Query: 480 FAGKVDMCCFDKTGTLTSDDMEFRGVVGLSNAE-LEDDMTKVPVRTQEILASCHALVFVD 538
FAGKVD+CCFDKTGTLTSDDMEFRGV GLSN E E DM+KVPVRT EILASCHALVFV+
Sbjct: 481 FAGKVDLCCFDKTGTLTSDDMEFRGVGGLSNCEEAETDMSKVPVRTLEILASCHALVFVE 540
Query: 539 NKLVGDPLEKAALKGIDWSYKSDEKAMPKRGGGNAVQIVQRHHFASHLKRMSVVVRVQEE 598
NKLVGDPLEKAALKGIDWSYK+DEKA+P+RG GN+VQI+QR+HFASHLKRMSV+VR+QEE
Sbjct: 541 NKLVGDPLEKAALKGIDWSYKADEKALPRRGNGNSVQIMQRYHFASHLKRMSVIVRIQEE 600
Query: 599 FFAFVKGAPETIQDRLTDLPSSYIETYKKYTHQGSRVLALAFKSLPDMTVSDARSLHRDE 658
+ AFVKGAPETIQ+RL D+P+ YIETYK+YT QGSRVLALA+K LPDM VS+AR + RD
Sbjct: 601 YLAFVKGAPETIQERLVDVPAQYIETYKRYTRQGSRVLALAYKRLPDMMVSEARDMDRDA 660
Query: 659 VENGLTFAGFAVFNCPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPV 718
VE+ LTFAGFAVFNCPIR DSA +L ELKNSS DL MITGDQALTAC+VA QVHIV+ PV
Sbjct: 661 VESDLTFAGFAVFNCPIRPDSAPVLLELKNSSHDLVMITGDQALTACHVAGQVHIVSNPV 720
Query: 719 LILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLTDAHDLCIGGDCFEMLQQTSAVLRVIP 778
LIL +G Y+WVSPDE E I YSEKE+E L + HDLCIGGD EMLQ TSAVLRVIP
Sbjct: 721 LILGRSGSGNEYKWVSPDEKEIIPYSEKEIETLAETHDLCIGGDSIEMLQATSAVLRVIP 780
Query: 779 YVKVFARVAPEQKELILTTFKAVGRMTLMCGDGTNDVGALKQAHVGVALLNAVPPTQSGN 838
+VKVFARVAP+QKELILTTFKAVGR TLMCGDGTNDVGALKQAHVGVALLN P +
Sbjct: 781 FVKVFARVAPQQKELILTTFKAVGRGTLMCGDGTNDVGALKQAHVGVALLNNKLPLSPSD 840
Query: 839 SSSEASKDENTKSVKSKKSKSASEAASKAMSLNSEGTSKGKASARLEANSRTAGNRHLTA 898
SS + + E ASK ++ N EG+SKGK + NRHLTA
Sbjct: 841 SSKDDKSKSKKSKL-------PLEPASKTITQNGEGSSKGKIPPQ---------NRHLTA 884
Query: 899 AEMQREKLKKMMEEL-NEEGDGRSAPIVKLGDASMASPFTAKHASVAPTTDIIRQGRSTL 957
AE+QR+KLKK+M++L N+EGDGRSAP+VKLGDASMASPFTAKHASVAP TDIIRQGRSTL
Sbjct: 885 AELQRQKLKKIMDDLNNDEGDGRSAPLVKLGDASMASPFTAKHASVAPVTDIIRQGRSTL 944
Query: 958 VTTLQMFKILGLNCLATAYVLSVMYLDGVKLGDVQATISGVFTAAFFLFISHARPLPTLS 1017
VTTLQMFKILGLNCLATAYVLSVMYLDGVKLGDVQATISGV TAAFFLFISHARPL TLS
Sbjct: 945 VTTLQMFKILGLNCLATAYVLSVMYLDGVKLGDVQATISGVLTAAFFLFISHARPLQTLS 1004
Query: 1018 AARPHPNIFCSYVFLSLMGQFAIHLFFLISSVKEAEKYMPDECIEPDADFHPNLVNTVSY 1077
A RPHP++F Y+FLSL+GQFA+HL FL+ SVKEAEK+MP+ECIEPDA FHPNLVNTVSY
Sbjct: 1005 AERPHPSVFSVYLFLSLIGQFAVHLTFLVYSVKEAEKHMPEECIEPDASFHPNLVNTVSY 1064
Query: 1078 MVNMMIQVATFAVNYMGHPFNQSISENKPFMYALMGAVGFFTVITSDLLRSLNDWLKLVP 1137
MV+MM+QVATFAVNYMGHPFNQSI ENKPF YAL+ GFFTVI SDL R LND LKLVP
Sbjct: 1065 MVSMMLQVATFAVNYMGHPFNQSIRENKPFFYALIAGAGFFTVIASDLFRDLNDSLKLVP 1124
Query: 1138 LPSGLRDKLLIWAGLMFLGCYSWERFLRWAFPGKVPAWRKRQRLAAANLEKK 1189
LP GLRDKLLIWA LMF+ CYSWER LRWAFPGK+ +W+ +QR ANLEKK
Sbjct: 1125 LPQGLRDKLLIWASLMFIICYSWERLLRWAFPGKISSWKHKQRAVTANLEKK 1176
|
Involved in transport of cations. Arabidopsis thaliana (taxid: 3702) EC: 3EC: .EC: 6EC: .EC: 3EC: .EC: - |
| >sp|Q9HD20|AT131_HUMAN Probable cation-transporting ATPase 13A1 OS=Homo sapiens GN=ATP13A1 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 884 bits (2284), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 492/1117 (44%), Positives = 680/1117 (60%), Gaps = 78/1117 (6%)
Query: 28 VWPFA-ILYSGWLIAIVPS--------IDFGDAAI-VLGGLVAFHILVWLFTAWSVDFKC 77
V PFA +LY WL A + +AA+ VL + H L L WSV C
Sbjct: 67 VLPFAGLLYPAWLGAAAAGCWGWGSSWVQIPEAALLVLATICLAHALTVLSGHWSVHAHC 126
Query: 78 FAHYSKINDIHLADACKITPVKFCGSKEVVPLQFWKQSAVSSTPVDEDEICFDFRKQHFI 137
+ D A K+ P GS E+V L + V + F+F+K +
Sbjct: 127 ALTCTPEYDPSKATFVKVVPTPNNGSTELVALH--RNEGEDGLEV----LSFEFQKIKYS 180
Query: 138 Y-SREKGTFCKLPYPTKETFGYYLKCTGHSTEAKIAVATEKWGRNVFEYPQPTFQKLMKE 196
Y + EK F + +P F YY G +++I A +K+G N E P F +L KE
Sbjct: 181 YDALEKKQFLPVAFPVGNAFSYYQSNRGFQEDSEIRAAEKKFGSNKAEMVVPDFSELFKE 240
Query: 197 NCMEPFFVFQVFCVGLWCLDEYWYYSLFTLFMLFMFESTMAKSRLKTLTEIRRVRVDNQT 256
PFFVFQVFCVGLWCLDEYWYYS+FTL ML FE+++ + +++ ++EIR++
Sbjct: 241 RATAPFFVFQVFCVGLWCLDEYWYYSVFTLSMLVAFEASLVQQQMRNMSEIRKMGNKPHM 300
Query: 257 IMVHRCGKWVKLAGTDLVPGDVVSIGRSSGQTGEDKSVPADMLILGGSAIVNEAILTGES 316
I V+R KW +A ++VPGD+VSIGRS ++ VP D+L+L G IV+EA+LTGES
Sbjct: 301 IQVYRSRKWRPIASDEIVPGDIVSIGRSP----QENLVPCDVLLLRGRCIVDEAMLTGES 356
Query: 317 TPQWKVSIMGRETGEKLSARRD-KSHVLFGGTKILQHTPDK--TFPLKTPDGGCLAVVLR 373
PQ K I L + D + HV+FGGTK++QH P + T LK D GC+A VLR
Sbjct: 357 VPQMKEPIEDLSPDRVLDLQADSRLHVIFGGTKVVQHIPPQKATTGLKPVDSGCVAYVLR 416
Query: 374 TGFETSQGKLMRTILFSTERVTANSWESGLFILFLVVFAVIAAGYVLKKGMEDPTRSKYK 433
TGF TSQGKL+RTILF +RVTAN+ E+ +FILFL+VFA+ AA YV +G +DP+R++YK
Sbjct: 417 TGFNTSQGKLLRTILFGVKRVTANNLETFIFILFLLVFAIAAAAYVWIEGTKDPSRNRYK 476
Query: 434 LFLSCSLIITSVIPPELPMELSIAVNTSLIALARRGIFCTEPFRIPFAGKVDMCCFDKTG 493
LFL C+LI+TSV+PPELP+ELS+AVNTSLIALA+ ++CTEPFRIPFAGKV++CCFDKTG
Sbjct: 477 LFLECTLILTSVVPPELPIELSLAVNTSLIALAKLYMYCTEPFRIPFAGKVEVCCFDKTG 536
Query: 494 TLTSDDMEFRGVVGLSNAELEDDMTKVPVRTQEILASCHALVFVDN-KLVGDPLEKAALK 552
TLTSD + RGV GL + + ++ +PV T LASCH+L+ +D+ LVGDPLEKA L
Sbjct: 537 TLTSDSLVVRGVAGLRDGKEVTPVSSIPVETHRALASCHSLMQLDDGTLVGDPLEKAMLT 596
Query: 553 GIDWSYKSDEKAMPKRGGGNAVQIVQRHHFASHLKRMSVVVRVQEE------FFAFVKGA 606
+DW+ DEK P+ ++I QR HFAS LKRMSV+ ++ + A VKGA
Sbjct: 597 AVDWTLTKDEKVFPRSIKTQGLKIHQRFHFASALKRMSVLASYEKLGSTDLCYIAAVKGA 656
Query: 607 PETIQDRLTDLPSSYIETYKKYTHQGSRVLALAFKSLPDMTVSDARSLHRDEVENGLTFA 666
PET+ + P Y + + + +G+RVLAL +K L +T AR + R+ +E L F
Sbjct: 657 PETLHSMFSQCPPDYHHIHTEISREGARVLALGYKELGHLTHQQAREVKREALECSLKFV 716
Query: 667 GFAVFNCPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKP--VLILCPV 724
GF V +CP++ DS ++ E++N+S + MITGD LTAC+VA ++H + K +++ P
Sbjct: 717 GFIVVSCPLKADSKAVIREIQNASHRVVMITGDNPLTACHVAQELHFIEKAHTLILQPPS 776
Query: 725 KNGKVYEWVSPDETEKIQYSEKEVEGLTDAHDLCIGGDCFEMLQQT--SAVLRVIPYVKV 782
+ G+ EW S D + + + + L + LC+ GD LQ T +LR+IP+V+V
Sbjct: 777 EKGRQCEWRSIDGSIVLPLARGSPKALALEYALCLTGDGLAHLQATDPQQLLRLIPHVQV 836
Query: 783 FARVAPEQKELILTTFKAVGRMTLMCGDGTNDVGALKQAHVGVALLNAVPPTQSGNSSSE 842
FARVAP+QKE ++T+ K +G +TLMCGDGTNDVGALK A VGVALL
Sbjct: 837 FARVAPKQKEFVITSLKELGYVTLMCGDGTNDVGALKHADVGVALL-------------- 882
Query: 843 ASKDENTKSVKSKKSKSASEAASKAMSLNSEGTSKGKASARLEANSRTAGNRH-LTAAE- 900
A+ S +++ + A SRTA R L +E
Sbjct: 883 -----------------ANAPERVVERRRRPRDSPTLSNSGIRATSRTAKQRSGLPPSEE 925
Query: 901 ---MQREKLKKMMEELNEEGDGRSAPIVKLGDASMASPFTAKHASVAPTTDIIRQGRSTL 957
QR++L +++ +L +E S PIVKLGDAS+A+PFT+K +S+ +I+QGR TL
Sbjct: 926 QPTSQRDRLSQVLRDLEDE----STPIVKLGDASIAAPFTSKLSSIQCICHVIKQGRCTL 981
Query: 958 VTTLQMFKILGLNCLATAYVLSVMYLDGVKLGDVQATISGVFTAAFFLFISHARPLPTLS 1017
VTTLQMFKIL LN L AY SV+YL+GVK D QAT+ G+ A FLFIS ++PL TLS
Sbjct: 982 VTTLQMFKILALNALILAYSQSVLYLEGVKFSDFQATLQGLLLAGCFLFISRSKPLKTLS 1041
Query: 1018 AARPHPNIFCSYVFLSLMGQFAIHLFFLISSVKEAEKYMP---DECIEPDADFHPNLVNT 1074
RP PNIF Y L++M QF +H L+ +EA+ P ++ ++ +F P+LVN+
Sbjct: 1042 RERPLPNIFNLYTILTVMLQFFVHFLSLVYLYREAQARSPEKQEQFVDLYKEFEPSLVNS 1101
Query: 1075 VSYMVNMMIQVATFAVNYMGHPFNQSISENKPFMYAL 1111
Y++ M +Q+ATFA+NY G PF +S+ ENKP +++L
Sbjct: 1102 TVYIMAMAMQMATFAINYKGPPFMESLPENKPLVWSL 1138
|
Homo sapiens (taxid: 9606) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: - |
| >sp|Q9EPE9|AT131_MOUSE Probable cation-transporting ATPase 13A1 OS=Mus musculus GN=Atp13a1 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 876 bits (2263), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 488/1113 (43%), Positives = 679/1113 (61%), Gaps = 71/1113 (6%)
Query: 28 VWPFA-ILYSGWLIAIVPS--------IDFGDAAIV-LGGLVAFHILVWLFTAWSVDFKC 77
V PFA +LY WL A +AA++ L + H L L WSV C
Sbjct: 64 VLPFAGLLYPAWLGAAASGCWGWGSSWTQIPEAALLALATICLAHALTVLSGHWSVHAHC 123
Query: 78 FAHYSKINDIHLADACKITPVKFCGSKEVVPLQFWKQSAVSSTPVDEDEI-CFDFRKQHF 136
+ D + K+ P GS E+V L K D E+ F+F+K +
Sbjct: 124 ALTCTPEYDPNKVTFVKVVPTPNNGSTELVALHRDKGE-------DGLEVLSFEFQKIKY 176
Query: 137 IY-SREKGTFCKLPYPTKETFGYYLKCTGHSTEAKIAVATEKWGRNVFEYPQPTFQKLMK 195
Y + EK F + +P F YY G +++I A +K+G N E P F +L K
Sbjct: 177 SYDALEKKQFLPVAFPVGNAFSYYQSNRGFQEDSEIRAAEKKFGSNKAEMVVPDFSELFK 236
Query: 196 ENCMEPFFVFQVFCVGLWCLDEYWYYSLFTLFMLFMFESTMAKSRLKTLTEIRRVRVDNQ 255
E PFFVFQVFCVGLWCLDEYWYYS+FTL ML FE+++ + +++ ++EIR++
Sbjct: 237 ERATAPFFVFQVFCVGLWCLDEYWYYSVFTLSMLVAFEASLVQQQMRNMSEIRKMGNKPH 296
Query: 256 TIMVHRCGKWVKLAGTDLVPGDVVSIGRSSGQTGEDKSVPADMLILGGSAIVNEAILTGE 315
I V+R KW +A D+VPGD+VSIGRS ++ VP D+L+L G IV+EA+LTGE
Sbjct: 297 MIQVYRSRKWRPVASDDIVPGDIVSIGRSP----QENLVPCDVLLLRGRCIVDEAMLTGE 352
Query: 316 STPQWKVSIMGRETGEKLSARRD-KSHVLFGGTKILQHTPDK--TFPLKTPDGGCLAVVL 372
S PQ K I L + D + HV+FGGTK++QH P + T LK D GC+A VL
Sbjct: 353 SVPQMKEPIEDLSPDRVLDLQADARLHVIFGGTKVVQHIPPQKATSGLKPVDNGCVAFVL 412
Query: 373 RTGFETSQGKLMRTILFSTERVTANSWESGLFILFLVVFAVIAAGYVLKKGMEDPTRSKY 432
RTGF TSQG+L+RTILF +RVTAN+ E+ +FILFL+VFA+ AA YV +G +DP+R++Y
Sbjct: 413 RTGFNTSQGRLLRTILFGVKRVTANNLETFIFILFLLVFAIAAAAYVWVEGTKDPSRNRY 472
Query: 433 KLFLSCSLIITSVIPPELPMELSIAVNTSLIALARRGIFCTEPFRIPFAGKVDMCCFDKT 492
KLFL C+LI+TSV+PPELP+ELS+AVNTSLIALA+ ++CTEPFRIPFAGKV++CCFDKT
Sbjct: 473 KLFLECTLILTSVVPPELPIELSLAVNTSLIALAKLYMYCTEPFRIPFAGKVEVCCFDKT 532
Query: 493 GTLTSDDMEFRGVVGLSNAELEDDMTKVPVRTQEILASCHALVFVDN-KLVGDPLEKAAL 551
GTLTSD + RGV GL + + ++ +P+ T LASCH+L+ +D+ LVGDPLEKA L
Sbjct: 533 GTLTSDSLVVRGVAGLRDGKEVTPVSSIPIETHRALASCHSLMQLDDGTLVGDPLEKAML 592
Query: 552 KGIDWSYKSDEKAMPKRGGGNAVQIVQRHHFASHLKRMSVVVRVQEE------FFAFVKG 605
+DW+ DEK P+ ++I QR HFAS LKRMSV+ ++ + A VKG
Sbjct: 593 TAVDWTLTKDEKVFPRSIKTQGLKIHQRFHFASALKRMSVLASYEKLGSTDLCYIAAVKG 652
Query: 606 APETIQDRLTDLPSSYIETYKKYTHQGSRVLALAFKSLPDMTVSDARSLHRDEVENGLTF 665
APET+ + P Y + + + +G+RVLAL +K L +T AR + R+ +E L F
Sbjct: 653 APETLHSMFSQCPPDYHHIHTEISREGARVLALGYKELGHLTHQQAREIKREALECSLKF 712
Query: 666 AGFAVFNCPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKP--VLILCP 723
GF V +CP++ DS ++ E++N+S + MITGD LTAC+VA ++H + K +++ P
Sbjct: 713 VGFIVVSCPLKADSKAVIREIQNASHRVVMITGDNPLTACHVAQELHFIDKAHTLILHPP 772
Query: 724 VKNGKVYEWVSPDETEKIQYSEKEVEGLTDAHDLCIGGDCFEMLQQT--SAVLRVIPYVK 781
+ G+ EW S D + + + + L H LC+ GD LQ +L +IP+V+
Sbjct: 773 SEKGQPCEWRSIDSSIVLPLTLGSPKALALEHALCLTGDGLAHLQAVDPQQLLCLIPHVQ 832
Query: 782 VFARVAPEQKELILTTFKAVGRMTLMCGDGTNDVGALKQAHVGVALLNAVPPTQSGNSSS 841
VFARVAP+QKE ++T+ K +G +TLMCGDGTNDVGALK A VGVALL +
Sbjct: 833 VFARVAPKQKEFVITSLKELGYVTLMCGDGTNDVGALKHADVGVALL------------A 880
Query: 842 EASKDENTKSVKSKKSKSASEAASKAMSLNSEGTSKGKASARLEANSRTAGNRHLTAAEM 901
A + + + + S S + + S + SA L A +
Sbjct: 881 NAPERVVERRRRPRDSPVLSNSGPRV------SRSTKQKSALLSPEEPPASH-------- 926
Query: 902 QREKLKKMMEELNEEGDGRSAPIVKLGDASMASPFTAKHASVAPTTDIIRQGRSTLVTTL 961
R++L +++ +L EE S PIVKLGDAS+A+PFT+K +S+ +I+QGR TLVTTL
Sbjct: 927 -RDRLSQVLRDLEEE----STPIVKLGDASIAAPFTSKLSSIQCICHVIKQGRCTLVTTL 981
Query: 962 QMFKILGLNCLATAYVLSVMYLDGVKLGDVQATISGVFTAAFFLFISHARPLPTLSAARP 1021
QMFKIL LN L AY SV+YL+GVK D QAT+ G+ A FLFIS ++PL TLS RP
Sbjct: 982 QMFKILALNALILAYSQSVLYLEGVKFSDFQATLQGLLLAGCFLFISRSKPLKTLSRERP 1041
Query: 1022 HPNIFCSYVFLSLMGQFAIHLFFLISSVKEAEKYMP---DECIEPDADFHPNLVNTVSYM 1078
PNIF Y L++M QF++H L+ +EA+ P ++ ++ +F P+LVN+ Y+
Sbjct: 1042 LPNIFNLYTILTVMLQFSVHFLSLVYLYREAQARSPEKQEQFVDLYKEFEPSLVNSTVYI 1101
Query: 1079 VNMMIQVATFAVNYMGHPFNQSISENKPFMYAL 1111
+ M +Q+ATFA+NY G PF +S+ ENKP +++L
Sbjct: 1102 MAMAMQMATFAINYKGPPFMESLPENKPLVWSL 1134
|
Mus musculus (taxid: 10090) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: - |
| >sp|P90747|YE56_CAEEL Probable cation-transporting ATPase C10C6.6 OS=Caenorhabditis elegans GN=C10C6.6 PE=3 SV=3 | Back alignment and function description |
|---|
Score = 820 bits (2118), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 491/1171 (41%), Positives = 690/1171 (58%), Gaps = 48/1171 (4%)
Query: 25 RLDVWPFAILYSGWLIAIVPSIDFGD--AAIVLGGLVAFHIL--VWLFTAWSVDFKCFAH 80
L V PF I+ + W + + + +LG F IL V LF W + +CF
Sbjct: 21 HLYVPPFTIITAIWTYVWLNIFGYEEYYELGMLGYAAIFVILALVLLFCHWMMPVRCFLM 80
Query: 81 YSKINDIHLADACKITPVKFCGSKEVVPLQFWKQSAVSSTPVDEDEICFDFRKQHFIYSR 140
SK D+ +A + P + G E+V L + +T + ++ F+F++ H+ +
Sbjct: 81 CSKQEDVRIASHVCVIPTQNNGWPELVKL-------MRTTRDKQTKLWFEFQRVHYTWDE 133
Query: 141 EKGTFCKLPYPTKETFGYYLKCTGHSTEAKIAVATEKWGRNVFEYPQPTFQKLMKENCME 200
E F T + ++ K G E + A G N E P F ++ E
Sbjct: 134 ESREFQTKTLDTAKPMVFFQKSHGFEVEEHVKDAKYLLGDNKTEMIVPQFLEMFIERATA 193
Query: 201 PFFVFQVFCVGLWCLDEYWYYSLFTLFMLFMFESTMAKSRLKTLTEIRRVRVDNQTIMVH 260
PFFVFQVFCVGLWCL++ WYYSLFTLFML FE+T+ K ++K ++EIR + I V
Sbjct: 194 PFFVFQVFCVGLWCLEDMWYYSLFTLFMLMTFEATLVKQQMKNMSEIRNMGNKTYMINVL 253
Query: 261 RCGKWVKLAGTDLVPGDVVSIGRSSGQTGEDKSVPADMLILGGSAIVNEAILTGESTPQW 320
R KW K+ +LV GD+VSIGR + E++ VP D+L+L G IV+E++LTGES PQ
Sbjct: 254 RGKKWQKIKIEELVAGDIVSIGRGA----EEECVPCDLLLLRGPCIVDESMLTGESVPQM 309
Query: 321 KVSIMGRETGEKLSARRD-KSHVLFGGTKILQHT-PDKTFP--LKTPDGGCLAVVLRTGF 376
K I E + D + HV+FGGTKI+QHT P K +K+PDG C+ V+RTGF
Sbjct: 310 KEPIEDVEKDKIFDIETDSRLHVIFGGTKIVQHTAPGKAAEGMVKSPDGNCICYVIRTGF 369
Query: 377 ETSQGKLMRTILFSTERVTANSWESGLFILFLVVFAVIAAGYVLKKGMEDPTRSKYKLFL 436
TSQGKL+RTI+F ++ TAN+ E+ FILFL++FA+ AA Y+ KG D TRSKYKLFL
Sbjct: 370 NTSQGKLLRTIMFGVKKATANNLETFCFILFLLIFAIAAAAYLWIKGSVDETRSKYKLFL 429
Query: 437 SCSLIITSVIPPELPMELSIAVNTSLIALARRGIFCTEPFRIPFAGKVDMCCFDKTGTLT 496
C+LI+TSVIPPELP+ELS+AVN+SL+AL + GIFCTEPFRIPFAGKVD+CCFDKTGTLT
Sbjct: 430 ECTLILTSVIPPELPIELSLAVNSSLMALQKLGIFCTEPFRIPFAGKVDICCFDKTGTLT 489
Query: 497 SDDMEFRGVVGLSNAE--LEDDMTKVPVRTQEILASCHALVFVDNKLVGDPLEKAALKGI 554
+D++ G V L+N + + + +P + ++LASCH+LV + LVGDPLEKA L
Sbjct: 490 TDNLVVEG-VALNNQKEGMIRNAEDLPHESLQVLASCHSLVRFEEDLVGDPLEKACLSWC 548
Query: 555 DWSYKSDEKAMPKR---GGGNAVQIVQRHHFASHLKRMSVVVRVQE------EFFAFVKG 605
W+ + MP + G + ++I R+HF+S +KRM+VV Q F VKG
Sbjct: 549 GWNLTKGDAVMPPKTAAKGISGIKIFHRYHFSSAMKRMTVVAGYQSPGTSDTTFIVAVKG 608
Query: 606 APETIQDRLTDLPSSYIETYKKYTHQGSRVLALAFKSLPDMTVSDARSLHRDEVENGLTF 665
APE +++ DLPS Y ETY + T QGSRVLA+ + L + V + R R+ EN L F
Sbjct: 609 APEVLRNMYADLPSDYDETYTRLTRQGSRVLAMGIRKLGETRVGELRDKKRENFENDLAF 668
Query: 666 AGFAVFNCPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTK--PVLILCP 723
AGF V +CP++ D+ ++ E+ +SS +AMITGD LTAC+V+ + K P L+L
Sbjct: 669 AGFVVISCPLKSDTKTMIREIMDSSHVVAMITGDNPLTACHVSKVLKFTKKSLPTLVLDE 728
Query: 724 VKNGKVYEWVSPDETEKIQY-----SEKEVEGLTDAHDLCIGGDCFEML--QQTSAVLRV 776
+G + W S D T ++ ++ E + ++H+ C+ G F L + + + +
Sbjct: 729 PADGVDWMWKSVDGTIELPLKPETKNKMERKAFFNSHEFCLTGSAFHHLVHNEHTFLREL 788
Query: 777 IPYVKVFARVAPEQKELILTTFKAVGRMTLMCGDGTNDVGALKQAHVGVALLNAVPPTQS 836
I +VKVFAR+AP+QKE I+ K++G++TLMCGDGTNDVGALK A+VGVALL P
Sbjct: 789 ILHVKVFARMAPKQKERIINELKSLGKVTLMCGDGTNDVGALKHANVGVALLTN-PYDAE 847
Query: 837 GNSSSEASKDENTKSVKSKKSKSASEAASKAMSLNSEGTSKGKASARLEANSRTAGNRHL 896
+ E K + +S A + + A A +R
Sbjct: 848 KAAEKEKEKKAKIEEARSLVRSGAQLPQRPGAPGAPPAANAARRDAPPGARARAPLPPMA 907
Query: 897 TAAEMQREKLKKMMEELNEEGDGRSAPIVKLGDASMASPFTAKHASVAPTTDIIRQGRST 956
AA+ + + L K +EE + A ++KLGDAS+A+PFT+K+ S+A +I+QGR T
Sbjct: 908 NAAQARLDNLMKELEEEEK------AQVIKLGDASIAAPFTSKYTSIASICHVIKQGRCT 961
Query: 957 LVTTLQMFKILGLNCLATAYVLSVMYLDGVKLGDVQATISGVFTAAFFLFISHARPLPTL 1016
LVTTLQMFKIL LN L +AY LS +YLDGVK D QATI G+ AA FLFIS ++PL TL
Sbjct: 962 LVTTLQMFKILALNALVSAYSLSALYLDGVKFSDTQATIQGLLLAACFLFISKSKPLKTL 1021
Query: 1017 SAARPHPNIFCSYVFLSLMGQFAIHLFFLISSVKEAEKYMPDEC-IEPDADFHPNLVNTV 1075
S RP NIF +Y L++ QF +H L+ V A + ++ ++ +A F PN++NT
Sbjct: 1022 SRQRPMANIFNAYTLLTVTLQFIVHFSCLLYIVGLAHEANTEKAPVDLEAKFTPNILNTT 1081
Query: 1076 SYMVNMMIQVATFAVNYMGHPFNQSISENKPFMYALMGAVGFFTVITSDLLRSLNDWLKL 1135
Y+++M +QV TFAVNY G PF +S+ ENK +Y++M + G + S L +L
Sbjct: 1082 VYIISMALQVCTFAVNYRGRPFMESLFENKAMLYSIMFSGGAVFTLASGQATDLMIQFEL 1141
Query: 1136 VPLPSGLRDKLLIWAGLMFLGCYSWERFLRW 1166
V LP LR+ LL+ + CY +R L +
Sbjct: 1142 VVLPEALRNALLMCVTADLVICYIIDRGLNF 1172
|
Caenorhabditis elegans (taxid: 6239) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: - |
| >sp|O14072|ATC4_SCHPO Cation-transporting ATPase 4 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=cta4 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 820 bits (2118), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 486/1197 (40%), Positives = 681/1197 (56%), Gaps = 64/1197 (5%)
Query: 24 WRLDVWPFAILYSGWLIAIVPSIDFGDAAIVLGGLVA--FHILVWLFTAWSVDFKCFAHY 81
+ L VWPFA+ ++ + + + + L + H L WL W+ C
Sbjct: 25 FHLYVWPFALFVYPYIGYVYQNKLYSEEVRYLTYIAVGTIHALFWLAGEWNTKVYCLMTC 84
Query: 82 SKINDIHLADACKITPVKFCGSKEVVPLQFWKQSAVSSTPVDEDEICFDFRKQHFIYSRE 141
K + + A +TP K S V P+ K S + + F F+++ FIY E
Sbjct: 85 RKTDKVEQATHILVTPSKIGESSSVEPIT--KLVLPDSQTI---QYSFSFQRKRFIYEPE 139
Query: 142 KGTFCKLPYPTKE--TFGYYLKCTGHSTEAKIAVATEKWGRNVFEYPQPTFQKLMKENCM 199
KG F + +P E T G K TG T + + ++G+N F+ P PTF L KE+ +
Sbjct: 140 KGCFANITFPMDEPSTIGTLKKSTGL-TNIQSEIFLYRYGKNCFDIPIPTFGTLFKEHAV 198
Query: 200 EPFFVFQVFCVGLWCLDEYWYYSLFTLFMLFMFESTMAKSRLKTLTEIRRVRVDNQTIMV 259
PFFVFQ+FC LWCLD+YWY+SLF++FM+ E ++ R +TLTE R + + I V
Sbjct: 199 APFFVFQIFCCVLWCLDDYWYFSLFSMFMIIALECSVVWQRQRTLTEFRTMSIKPYEIQV 258
Query: 260 HRCGKWVKLAGTDLVPGDVVSIGRSSGQTGEDKSVPADMLILGGSAIVNEAILTGESTPQ 319
+R W ++ DL+P DVVS+ + ED +P D+L+L GS +VNEA+L+GESTP
Sbjct: 259 YRNKHWFPISTEDLLPNDVVSVLHNK----EDSGLPCDLLLLSGSCVVNEAMLSGESTPL 314
Query: 320 WKVSIMGRETGEKLSARR-DKSHVLFGGTKILQHTPDKTFPLKTPDGGCLAVVLRTGFET 378
K SI R + DK+ VLFGGT++LQ T LKTPD G A+VLRTGFET
Sbjct: 315 VKESIELRPEEAVIDVDELDKNAVLFGGTRVLQVTQSPFCKLKTPDNGVPAIVLRTGFET 374
Query: 379 SQGKLMRTILFSTERVTANSWESGLFILFLVVFAVIAAGYVLKKGMEDPTRSKYKLFLSC 438
SQG L+RT++FS+E+VTAN+ ES FILFL+VFA+ A+GYV G + RS+YKL L C
Sbjct: 375 SQGSLVRTMVFSSEKVTANNRESLYFILFLLVFAIAASGYVWHVGSKT-ERSRYKLMLDC 433
Query: 439 SLIITSVIPPELPMELSIAVNTSLIALARRGIFCTEPFRIPFAGKVDMCCFDKTGTLTSD 498
+IITSV+P ELPMELS+AVN SL AL++ I+CTEPFRIP +G +D+CCFDKTGTLT +
Sbjct: 434 VMIITSVVPSELPMELSMAVNASLGALSKYYIYCTEPFRIPLSGHLDICCFDKTGTLTEE 493
Query: 499 DMEFRGVVGLSNAELEDDMTKVPVRTQEILA--SCHALVFVDN-----KLVGDPLEKAAL 551
M +G+ G++ + ILA + H LV ++ K+VGDP+EKA +
Sbjct: 494 HMVVQGIAGVNRKDPYSLEKLSDASNDAILAIATAHTLVLLEQEGETPKVVGDPMEKATV 553
Query: 552 KGIDWSYKSDEKAMPKRGG---GNAVQIVQRHHFASHLKRMSVVVRVQE-----EFFAFV 603
+ + WS + G VQI++ F+S LKR S V V+ + F V
Sbjct: 554 ENLGWSIEKKNFVSAPEGSVFYKGKVQIIRNFQFSSALKRQSSVSNVRVSGGSFKTFVSV 613
Query: 604 KGAPETIQDRLTDLPSSYIETYKKYTHQGSRVLALAFKS----LPDMTVSDARSLHRDEV 659
KGAPE I L ++P Y + YK Y +GSRVLAL +K +P+ VSD L R+ +
Sbjct: 614 KGAPEVIATMLREVPKDYEKIYKDYGRKGSRVLALGYKYFKNYIPENQVSD---LSRESI 670
Query: 660 ENGLTFAGFAVFNCPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVL 719
E+ L FAGF +F P++ED+ + + L NSS MITGD LTA YVA QV IV KP L
Sbjct: 671 ESDLVFAGFLIFTSPLKEDARQTVQMLNNSSHRCMMITGDNPLTAVYVAEQVGIVEKPTL 730
Query: 720 IL-CPVKNGKVYEWVSPDETEKIQYS-EKEVEG-LTDAHDLCIGGDCFEMLQQTSAVLRV 776
+L +N K+ EW S D+T + + K +E L + +DLCI G + ++ +
Sbjct: 731 VLDIKHENEKILEWKSTDDTINLPMNPHKSLEASLYEKYDLCITGRALSQIINPDVIMSI 790
Query: 777 IPYVKVFARVAPEQKELILTTFKAVGRMTLMCGDGTNDVGALKQAHVGVALLNAVPPTQS 836
+ V+ARV+P QKE +++T K G +TLMCGDGTNDVGALKQAHVGVALLNA +
Sbjct: 791 FTHAWVYARVSPSQKEFMISTLKHNGYITLMCGDGTNDVGALKQAHVGVALLNA--SEED 848
Query: 837 GNSSSEASKDENTKSVKSKKSKSASE----------AASKAM-----SLNSEGTSKGKAS 881
E ++++ V K+ + A A A + + E T +G
Sbjct: 849 MLEMQERARNQKLMGVYEKQIQLAKRFNLPTPPVPPALCHAFPPGPNNPHREKTQEGLNK 908
Query: 882 ARLEANSRTAGNRHLTAAEMQREK----LKKMMEELNEEGDGRSAPIVKLGDASMASPFT 937
+ ++ A + LT AE E+ KM + L D AP +KLGDAS+A+PFT
Sbjct: 909 VLEDLETKKASDVQLTEAEKAAERRANLANKMFDTLANASDDE-APKLKLGDASVAAPFT 967
Query: 938 AKHASVAPTTDIIRQGRSTLVTTLQMFKILGLNCLATAYVLSVMYLDGVKLGDVQATISG 997
+K A V+ T+I+RQGR TLV +QM KIL LNCL TAY LSV++LDG+K GD Q TISG
Sbjct: 968 SKLAVVSSITNIVRQGRCTLVALVQMHKILALNCLITAYSLSVLHLDGIKFGDTQYTISG 1027
Query: 998 VFTAAFFLFISHARPLPTLSAARPHPNIFCSYVFLSLMGQFAIHLFFLISSVKEAEKYM- 1056
+ + F +S ARPL TLS RP IF +Y+ S++GQFAIH+ LI + Y
Sbjct: 1028 MLMSVCFYCVSRARPLETLSKERPQAGIFNTYIIGSVLGQFAIHIVTLIYITRVVYLYED 1087
Query: 1057 PDECIEPDADFHPNLVNTVSYMVNMMIQVATFAVNYMGHPFNQSISENKPFMYALMGAVG 1116
P E ++ + F P+L+NT Y++ ++ QV+TFA+NY G PF +++SENK Y L+G
Sbjct: 1088 PLEKVDLEETFKPSLLNTAIYLLQLIQQVSTFAINYQGRPFREALSENKGMYYGLLGIAF 1147
Query: 1117 FFTVITSDLLRSLNDWLKLVPLPSGLRDKLLIWAGLMFLGCYSWERFLRWAFPGKVP 1173
++ LN L+LV + + +LL + + C+ E ++ F P
Sbjct: 1148 VAIAGVTEFSPELNAKLQLVKMAYNFQIQLLATMVVDYAACWIIEELMKKYFRDNKP 1204
|
Has a role in regulating cation homeostasis. Involved in controlling nuclear calcium ion levels. Required for cytokinesis and stabilizing microtubules. Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: - |
| >sp|P39986|ATC6_YEAST Probable cation-transporting ATPase 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SPF1 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 813 bits (2100), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 498/1212 (41%), Positives = 695/1212 (57%), Gaps = 82/1212 (6%)
Query: 6 VGGKVVDRVDLLRKKHWVWRLDVWPFAILYSGWLIAIVPSIDFGDAA-----IVLGGLVA 60
V +V LL K + + V PF LY+ + D + LG LV+
Sbjct: 7 VSSPIVRDSTLLVPKSLIAKPYVLPFFPLYATFAQLYFQQYDRYIKGPEWTFVYLGTLVS 66
Query: 61 FHILVWLFTAWSVDFKCFAHYSKINDIHLADACKITPVKFCGSKEVVPLQFWKQSAVSST 120
+ILV L AW+V K +YS +++ A I GS +V +Q ++ T
Sbjct: 67 LNILVMLMPAWNVKIKAKFNYSTTKNVNEATHILIYTTPNNGSDGIVEIQRVTEAGSLQT 126
Query: 121 PVDEDEICFDFRKQHFIYSREKGTFCKLPYPTKET--FGYYLKCTGHSTEAKIAVATEKW 178
F F+K+ F++ + F + E+ G + KC GHS + + +
Sbjct: 127 -------FFQFQKKRFLWHENEQVFSSPKFLVDESPKIGDFQKCKGHSGD--LTHLKRLY 177
Query: 179 GRNVFEYPQPTFQKLMKENCMEPFFVFQVFCVGLWCLDEYWYYSLFTLFMLFMFESTMAK 238
G N F+ P PTF +L KE+ + P FVFQVFCV LW LDE+WYYSLF LFM+ E+
Sbjct: 178 GENSFDIPIPTFMELFKEHAVAPLFVFQVFCVALWLLDEFWYYSLFNLFMIISMEAAAVF 237
Query: 239 SRLKTLTEIRRVRVDNQTIMVHRCGKWVKLAGTDLVPGDVVSIGRSSGQTGEDKSVPADM 298
RL L E R + + TI V R KWV L +L+P D+VSI R T E+ ++P D+
Sbjct: 238 QRLTALKEFRTMGIKPYTINVFRNKKWVALQTNELLPMDLVSITR----TAEESAIPCDL 293
Query: 299 LILGGSAIVNEAILTGESTPQWKVSIMGRETGEKLSARR-DKSHVLFGGTKILQHTP--D 355
++L GSAIVNEA+L+GESTP K SI R + + L DK VL GGTK LQ TP
Sbjct: 294 ILLDGSAIVNEAMLSGESTPLLKESIKLRPSEDNLQLDGVDKIAVLHGGTKALQVTPPEH 353
Query: 356 KTFPLKTPDGGCLAVVLRTGFETSQGKLMRTILFSTERVTANSWESGLFILFLVVFAVIA 415
K+ PDGG LA+V +TGFETSQG L+R +++S ERV+ ++ E+ +FILFL++FAVIA
Sbjct: 354 KSDIPPPPDGGALAIVTKTGFETSQGSLVRVMIYSAERVSVDNKEALMFILFLLIFAVIA 413
Query: 416 AGYVLKKGMEDPTRSKYKLFLSCSLIITSVIPPELPMELSIAVNTSLIALARRGIFCTEP 475
+ YV +G + R + KL L C LIITSV+PPELPMEL++AVN+SL ALA+ ++CTEP
Sbjct: 414 SWYVWVEGTK-MGRIQSKLILDCILIITSVVPPELPMELTMAVNSSLAALAKFYVYCTEP 472
Query: 476 FRIPFAGKVDMCCFDKTGTLTSDDMEFRGVVGLSNAELED-----DMTKVPVRTQEILAS 530
FRIPFAG++D+CCFDKTGTLT +D+ F G+ G+S A+ E+ + P T ++ +
Sbjct: 473 FRIPFAGRIDVCCFDKTGTLTGEDLVFEGLAGIS-ADSENIRHLYSAAEAPESTILVIGA 531
Query: 531 CHALV-FVDNKLVGDPLEKAALKGIDWSYKSDEKAMPKRGGGNAVQIVQRHHFASHLKRM 589
HALV D +VGDP+EKA LK + W+ + K R G + I++R F+S LKR
Sbjct: 532 AHALVKLEDGDIVGDPMEKATLKAVGWAV--ERKNSNYREGTGKLDIIRRFQFSSALKRS 589
Query: 590 SVVVRVQEEFFAFVKGAPETIQDRLTDLPSSYIETYKKYTHQGSRVLALAFKSLPDMTVS 649
+ + + FA VKGAPETI++RL+D+P +Y E YK +T GSRVLALA KSLP M+ S
Sbjct: 590 ASIASHNDALFAAVKGAPETIRERLSDIPKNYDEIYKSFTRSGSRVLALASKSLPKMSQS 649
Query: 650 DARSLHRDEVENGLTFAGFAVFNCPIREDSAKILSELKNSSQDLAMITGDQALTACYVAS 709
L+RD+VE+ LTF GF +F+CP+++D+ + + L SS MITGD LTA +VA
Sbjct: 650 KIDDLNRDDVESELTFNGFLIFHCPLKDDAIETIKMLNESSHRSIMITGDNPLTAVHVAK 709
Query: 710 QVHIVTKPVLILCPVKNGK----------VYEWVS-PDETEKIQYSEKEVEGLTDAHDLC 758
+V IV LIL + GK V E VS P + K + + L D +D+
Sbjct: 710 EVGIVFGETLILD--RAGKSDDNQLLFRDVEETVSIPFDPSKDTFDHSK---LFDRYDIA 764
Query: 759 IGGDCFEMLQQTSAVLRVIPYVKVFARVAPEQKELILTTFKAVGRMTLMCGDGTNDVGAL 818
+ G L+ S + ++ + V+ARV+P QKE +L T K +G TLMCGDGTNDVGAL
Sbjct: 765 VTGYALNALEGHSQLRDLLRHTWVYARVSPSQKEFLLNTLKDMGYQTLMCGDGTNDVGAL 824
Query: 819 KQAHVGVALLNAVPPTQSG-NSSSEASKDENTKSVKSKKSK------------------- 858
KQAHVG+ALLN T+ G E + E K + K+++
Sbjct: 825 KQAHVGIALLNG---TEEGLKKLGEQRRLEGMKMMYIKQTEFMARWNQPQPPVPEPIAHL 881
Query: 859 --SASEAASKAMSLNSEGT--SKGKASARLEANSRTAGNRHLTA-AEMQREKLKKMMEEL 913
+ +L S+GT + A EANS+ +E + L ++ L
Sbjct: 882 FPPGPKNPHYLKALESKGTVITPEIRKAVEEANSKPVEVIKPNGLSEKKPADLASLL--L 939
Query: 914 NEEGD--GRSAPIVKLGDASMASPFTAKHASVAPTTDIIRQGRSTLVTTLQMFKILGLNC 971
N GD G AP +KLGDAS A+PFT+K A+V+ T+IIRQGR LV T+QM+KIL LNC
Sbjct: 940 NSAGDAQGDEAPALKLGDASCAAPFTSKLANVSAVTNIIRQGRCALVNTIQMYKILALNC 999
Query: 972 LATAYVLSVMYLDGVKLGDVQATISGVFTAAFFLFISHARPLPTLSAARPHPNIFCSYVF 1031
L +AY LS++Y+ GVK GD QAT+SG+ + FL IS +PL LS RP IF Y+
Sbjct: 1000 LISAYSLSIIYMAGVKFGDGQATVSGLLLSVCFLSISRGKPLEKLSKQRPQSGIFNVYIM 1059
Query: 1032 LSLMGQFAIHLFFLISSVKEAEKYMPDEC-IEPDADFHPNLVNTVSYMVNMMIQVATFAV 1090
S++ QFA+H+ L+ E K P E ++ + +F P+L+NT +++ ++ QV+TFAV
Sbjct: 1060 GSILSQFAVHIATLVYITTEIYKLEPREPQVDLEKEFAPSLLNTGIFIIQLVQQVSTFAV 1119
Query: 1091 NYMGHPFNQSISENKPFMYALMGAVGFFTVITSDLLRSLNDWLKLVPLPSGLRDKLLIWA 1150
NY G PF ++I NK Y L+G G ++ L LN+ +K VP+ + KL +
Sbjct: 1120 NYQGEPFRENIRSNKGMYYGLLGVTGLALASATEFLPELNEAMKFVPMTDDFKIKLTLTL 1179
Query: 1151 GLMFLGCYSWER 1162
L F G + E
Sbjct: 1180 LLDFFGSWGVEH 1191
|
Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: - |
| >sp|O74431|ATC9_SCHPO Probable cation-transporting ATPase C1672.11c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC1672.11c PE=3 SV=1 | Back alignment and function description |
|---|
Score = 309 bits (792), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 223/744 (29%), Positives = 362/744 (48%), Gaps = 109/744 (14%)
Query: 178 WGRNVFEYPQPTFQKLMKENCMEPFFVFQVFCVGLWCLDEYWYYSLFTLFM-LFMFESTM 236
+G N+ + + +L+ + + PF++FQVF + LW +D Y+YY++ L + + ++
Sbjct: 310 FGENLIDLELKSVSQLLIDEVLHPFYIFQVFSIILWSMDSYYYYAICILIISVVSILGSL 369
Query: 237 AKSRLKTLTEIRRVRVDNQTIMVHRCGKWVKLAGTDLVPGDVVSIGRSSGQTGEDKSVPA 296
++R KTL +R + + V+R G W ++ TDLV GDV I E PA
Sbjct: 370 IETR-KTLRRMREMSRFTCPVRVYRDGFWTSISSTDLVIGDVFEISDP-----ELTIFPA 423
Query: 297 DMLILGGSAIVNEAILTGESTPQWKVSIMGRETGEKLSARRDK-----SHVLFGGTKILQ 351
D L+L G IVNE++LTGES P K+ + E S ++ H LF GTKI+Q
Sbjct: 424 DALLLSGDCIVNESMLTGESIPVSKIPATDQSMKELFSFSKNIPASLCKHFLFSGTKIIQ 483
Query: 352 HTPDKTFPLKTPDGGCLAVVLRTGFETSQGKLMRTILFSTERVTANSWESGLFILFLVVF 411
K F + +G LA+V+RTGF T++G L+R+++F + +S FI + +
Sbjct: 484 VR--KPFVNEKEEGASLAMVVRTGFNTTKGALVRSMIFPKPTNFSFYRDSFRFITAMFII 541
Query: 412 AVIAAGY----VLKKGMEDPTRSKYKLFLSCSLIITSVIPPELPMELSIAVNTSLIALAR 467
A+I + +L G+ T + + +IT V+PP LP L+I ++ L +
Sbjct: 542 ALIGFVFSSINLLTLGVPIAT-----IIIRALDLITIVVPPALPATLTIGTTFAISRLRK 596
Query: 468 RGIFCTEPFRIPFAGKVDMCCFDKTGTLTSDDMEFRGVVGLSNAELED-----------D 516
+GIFC P R+ +GK+D+ FDKTGTLT D ++ GV + +EL D D
Sbjct: 597 QGIFCISPQRVNVSGKLDLISFDKTGTLTEDGLDIMGVSVIEGSELGDLRSNSGNLCSKD 656
Query: 517 M--TKVPVRTQEILASCHALVFVDNKLVGDPLEKAALKGIDWSYKSDEKAMPKRGGGNAV 574
+ P +A+CH L +VD +LVGDPL+ K WSY S+E + K+
Sbjct: 657 LLSNDSPSNLLYTMATCHMLRYVDGELVGDPLDIKMFKFTHWSY-SEENFLNKKMSSEQA 715
Query: 575 Q----------------------------------IVQRHHFASHLKRMSVVVRVQ--EE 598
+ IV+ F S L+RM+V+V+ ++
Sbjct: 716 EDAAYVRTQQLIPPTVSPPWNSPSNNYTESDLELGIVRTFEFVSQLRRMAVIVKHGKFKK 775
Query: 599 FFAFVKGAPETIQD--RLTDLPSSYIETYKKYTHQGSRVLALAFKSLPDMTVSDARSLHR 656
A+VKGAPE + + P++Y E YTH G RV+A A K L + T + A+ + R
Sbjct: 776 MDAYVKGAPEIMPSICKPESFPANYQEVLDYYTHNGFRVIACASKQLENCTWAKAQRMKR 835
Query: 657 DEVENGLTFAGFAVFNCPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTK 716
++VE L F GF VF ++ +A ++ EL ++ M TGD LT+ V + ++ +
Sbjct: 836 EQVECDLDFCGFIVFENKLKSTTATVIRELNDARIRTVMCTGDNVLTSICVGKRCGMLPE 895
Query: 717 PVLILCP--------------------VKNGKVYEWVSPDETE-KIQYSEK-----EVEG 750
+ P ++N +++ + P + +++ E+
Sbjct: 896 DGYVFLPRFDEESESADEASRQLVWQAIENNEIF--LDPHTLRPNVDFADHEPVSIELAR 953
Query: 751 LTDAHDLCIGGDCFEMLQQTSAVLRVIPYV----KVFARVAPEQKELILTTFKAVGRMTL 806
L D H + + GD F L A L V ++ ++FAR++P +K +++ F+ +
Sbjct: 954 LKDFH-IALTGDVFRWLVDY-APLNVFHHILLKAQIFARMSPSEKNELVSCFQNLNYCVG 1011
Query: 807 MCGDGTNDVGALKQAHVGVALLNA 830
CGDG ND GALK A VG++L A
Sbjct: 1012 FCGDGANDCGALKAADVGISLSEA 1035
|
Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: - |
| >sp|Q12697|YPK9_YEAST Vacuolar cation-transporting ATPase YPK9 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YPK9 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 296 bits (758), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 217/754 (28%), Positives = 359/754 (47%), Gaps = 121/754 (16%)
Query: 178 WGRNVFEYPQPTFQKLMKENCMEPFFVFQVFCVGLWCLDEYWYYS--LFTLFMLFMFEST 235
+G+N T +++ + PF+VFQVF + LW +DEY+YY+ +F + +L +F+S
Sbjct: 474 FGKNQINLRMKTTSEILFNEVLHPFYVFQVFSIILWGIDEYYYYAACIFLISVLSIFDSL 533
Query: 236 MAKSRL-KTLTEIRRVRVDNQTIMVHRCGKWVKLAGTDLVPGDVVSIGRSSGQTGEDKSV 294
+ ++ + L E+ D + V R W ++ ++LVPGD+ + + +
Sbjct: 534 NEQKKVSRNLAEMSHFHCD---VRVLRDKFWTTISSSELVPGDIYEVSDPNITI-----L 585
Query: 295 PADMLILGGSAIVNEAILTGESTPQWKVSIMGRETGEKLSARRDKSHV--------LFGG 346
P D ++L IVNE++LTGES P K ET +L + + L+ G
Sbjct: 586 PCDSILLSSDCIVNESMLTGESVPVSKFP-ATEETMYQLCDDFQSTQISSFVSKSFLYNG 644
Query: 347 TKILQHTPDKTFPLKTPDGGCLAVVLRTGFETSQGKLMRTILFSTERVTANSWESGLFIL 406
T I++ + P +T LA+V+RTGF T++G L+R+++F +S +I
Sbjct: 645 TNIIRA---RIAPGQT---AALAMVVRTGFSTTKGSLVRSMVFPKPTGFKFYRDSFKYIG 698
Query: 407 FLVVFAV----IAAGYVLKKGMEDPTRSKYKLFLSCSLIITSVIPPELPMELSIAVNTSL 462
F+ + A+ ++ +K G++ T + L IIT V+PP LP L+I N +L
Sbjct: 699 FMSLIAIFGFCVSCVQFIKLGLDKKT-----MILRALDIITIVVPPALPATLTIGTNFAL 753
Query: 463 IALARRGIFCTEPFRIPFAGKVDMCCFDKTGTLTSDDM--------EFRGVVGLSNAELE 514
L +GIFC P R+ +GK+D+ CFDKTGTLT D + E GV G EL
Sbjct: 754 SRLKEKGIFCISPTRLNISGKIDVMCFDKTGTLTEDGLDVLGVQISEPNGVRGQKFGELL 813
Query: 515 DDMTKV-----------PVRTQE-----ILASCHALVFVDNKLVGDPLEKAALKGIDWSY 558
D+ +V P+ + L +CH+L VD L+GDPL+ + WS+
Sbjct: 814 SDIRQVFPKFSLNDCSSPLDFKSRNFFMSLLTCHSLRSVDGNLLGDPLDFKMFQFTGWSF 873
Query: 559 KSD-------------------------------------EKAMPKRGGGNAVQIVQRHH 581
+ D E N + +V+
Sbjct: 874 EEDFQKRAFHSLYEGRHEDDVFPENSEIIPAVVHPDSNNRENTFTDNDPHNFLGVVRSFE 933
Query: 582 FASHLKRMSVVVRVQEE--FFAFVKGAPETIQD--RLTDLPSSYIETYKKYTHQGSRVLA 637
F S L+RMSV+V+ + +++F KGAPE I + + LP+ + E + YTH G RV+A
Sbjct: 934 FLSELRRMSVIVKTNNDDVYWSFTKGAPEVISEICNKSTLPADFEEVLRCYTHNGYRVIA 993
Query: 638 LAFKSLPDMTVSDARSLHRDEVENGLTFAGFAVFNCPIREDSAKILSELKNSSQDLAMIT 697
A K+LP T ++ + R+EVE+ L F GF +F +++++++ L L++++ M T
Sbjct: 994 CAGKTLPKRTWLYSQKVSREEVESNLEFLGFIIFQNKLKKETSETLKSLQDANIRTIMCT 1053
Query: 698 GDQALTACYVASQVHI-----VTKPVLILCPVKNGKVYEWVSPDETEKI---------QY 743
GD LTA V + + V P + P+ V W +E +KI +
Sbjct: 1054 GDNILTAISVGREAGLIQCSRVYVPSINDTPLHGEPVIVWRDVNEPDKILDTKTLKPVKL 1113
Query: 744 SEKEVEGLTDA-HDLCIGGDCFEMLQQTSAVL------RVIPYVKVFARVAPEQKELILT 796
VE L + + L + GD F +L + + ++ ++AR++P++K ++
Sbjct: 1114 GNNSVESLRECNYTLAVSGDVFRLLFRDENEIPEEYLNEILLNSSIYARMSPDEKHELMI 1173
Query: 797 TFKAVGRMTLMCGDGTNDVGALKQAHVGVALLNA 830
+ + CGDG ND GALK A VG++L A
Sbjct: 1174 QLQKLDYTVGFCGDGANDCGALKAADVGISLSEA 1207
|
Vacuolar transporter which plays a role in sequestration of divalent heavy metal ions. Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: - |
| >sp|Q5XF89|AT133_MOUSE Probable cation-transporting ATPase 13A3 OS=Mus musculus GN=Atp13a3 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 286 bits (732), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 218/727 (29%), Positives = 356/727 (48%), Gaps = 94/727 (12%)
Query: 178 WGRNVFEYPQPTFQKLMKENCMEPFFVFQVFCVGLWCLDEYWYYSLFTLFMLFMFESTMA 237
+G N P+ KL+ + + PF++FQ+F V LW +DEY+YY+L + M + +
Sbjct: 187 YGVNEIAVKVPSVFKLLIKEVLNPFYIFQLFSVILWSVDEYYYYALAIVIMSVVSIISSL 246
Query: 238 KSRLKTLTEIRRVRVDNQTIMVHRCGKWVKLA---GTDLVPGDVVSIGRSSGQTGEDKSV 294
S K + + + T+ V C + ++ TDLVPGDV+ I + +
Sbjct: 247 YSIRKQYVMLHDMVATHSTVRVSVCRENEEIEEIFSTDLVPGDVMIIPLNG------TVM 300
Query: 295 PADMLILGGSAIVNEAILTGESTPQWKVSI---------MGRETGEKLSARRDKSHVLFG 345
P D +++ G+ IVNE++LTGES P K ++ MG E + S K H LF
Sbjct: 301 PCDAVLINGTCIVNESMLTGESVPVTKTNLPNPSVDVKGMGEE---QYSPETHKRHTLFC 357
Query: 346 GTKILQHTPDKTFPLKTPDGGCLAVVLRTGFETSQGKLMRTILFSTERVTANSWESGLFI 405
GT ++Q T T L A+V+RTGF TS+G+L+R+IL+ ++ LF+
Sbjct: 358 GTTVIQ-TRFYTGELVK------AIVVRTGFSTSKGQLVRSILYPKPTDFKLYRDAYLFL 410
Query: 406 LFLVVFAVIAAGYVLKKGMEDPTRSKYKLFLSCSLIITSVIPPELPMELSIAVNTSLIAL 465
L LVV A I Y + + + + ++ + IIT +PP LP ++ + + L
Sbjct: 411 LCLVVVAGIGFIYTIINSILNEKEVQ-EIIIKSLDIITITVPPALPAAMTAGIVYAQRRL 469
Query: 466 ARRGIFCTEPFRIPFAGKVDMCCFDKTGTLTSDDMEFRGVVGLSNAEL---EDDM-TKVP 521
+ GIFC P RI G++++ CFDKTGTLT D ++ G+ + N ED++ +++
Sbjct: 470 KKVGIFCISPQRINICGQLNLVCFDKTGTLTEDGLDLWGIQRVENTRFLLPEDNVCSEML 529
Query: 522 VRTQEI--LASCHALVFVDNKLVGDPLEKAALKGIDW--------SYKSDEKAMPK---- 567
V++Q + +A+CH+L ++ L GDPL+ + I W + MP
Sbjct: 530 VKSQFVACMATCHSLTKIEGVLSGDPLDLKMFEAIGWILEEATEEETALHNRIMPTVVRP 589
Query: 568 --------RGGGNA------------VQIVQRHHFASHLKRMSVVVRV--QEEFFAFVKG 605
GN + IV++ F+S L+RMSVV R ++ A++KG
Sbjct: 590 SKQLLPEPTTAGNQEMELFELPAIYEIGIVRQFPFSSALQRMSVVARTLGEKRMDAYMKG 649
Query: 606 APETIQD--RLTDLPSSYIETYKKYTHQGSRVLALAFKSLPD-MTVSDARSLHRDEVENG 662
APE + + +P + + + YT QG RV+ALA + L +T + + RD +EN
Sbjct: 650 APEVVASLCKPETVPVDFEKVLEDYTKQGFRVIALAHRKLESKLTWHKVQHISRDAIENN 709
Query: 663 LTFAGFAVFNCPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIV--TKPVLI 720
+ F G + +++++ +L +L ++ M+TGD LTA VA ++ V+I
Sbjct: 710 MDFMGLIIMQNKLKQETPAVLEDLHKANIRTVMVTGDNMLTAVSVARDCGMILPQDKVII 769
Query: 721 --LCPVKNGKV--YEWVSPDETEKIQYS---EKEVEGLTDAHD-----------LCIGGD 762
P K+GKV W D + S + E + AHD + G
Sbjct: 770 AEALPPKDGKVAKINWHYTDSLSQCSESSAIDSEAIPIKLAHDSLEDLEVTRYHFAMNGK 829
Query: 763 CFEMLQQ--TSAVLRVIPYVKVFARVAPEQKELILTTFKAVGRMTLMCGDGTNDVGALKQ 820
F ++ + V +++ + VFAR+AP+QK ++ + V MCGDG ND GALK+
Sbjct: 830 SFSVILEHFQDLVPKLMLHGTVFARMAPDQKTQLVEALQNVDYFVGMCGDGANDCGALKR 889
Query: 821 AHVGVAL 827
AH G++L
Sbjct: 890 AHGGISL 896
|
Mus musculus (taxid: 10090) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: - |
| >sp|Q9H7F0|AT133_HUMAN Probable cation-transporting ATPase 13A3 OS=Homo sapiens GN=ATP13A3 PE=1 SV=4 | Back alignment and function description |
|---|
Score = 280 bits (717), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 216/724 (29%), Positives = 351/724 (48%), Gaps = 88/724 (12%)
Query: 178 WGRNVFEYPQPTFQKLMKENCMEPFFVFQVFCVGLWCLDEYWYYSLFTLFMLFMFESTMA 237
+G N P+ KL+ + + PF++FQ+F V LW DEY+YY+L + M + +
Sbjct: 191 YGVNEIAVKVPSVFKLLIKEVLNPFYIFQLFSVILWSTDEYYYYALAIVVMSIVSIVSSL 250
Query: 238 KSRLKTLTEIRRVRVDNQTIMVHRC---GKWVKLAGTDLVPGDVVSIGRSSGQTGEDKSV 294
S K + + + T+ V C + ++ TDLVPGDV+ I + +
Sbjct: 251 YSIRKQYVMLHDMVATHSTVRVSVCRVNEEIEEIFSTDLVPGDVMVIPLNG------TIM 304
Query: 295 PADMLILGGSAIVNEAILTGESTPQWKV-----SIMGRETGEKL-SARRDKSHVLFGGTK 348
P D +++ G+ IVNE++LTGES P K S+ + G++L + K H LF GT
Sbjct: 305 PCDAVLINGTCIVNESMLTGESVPVTKTNLPNPSVDVKGIGDELYNPETHKRHTLFCGTT 364
Query: 349 ILQHTPDKTFPLKTPDGGCLAVVLRTGFETSQGKLMRTILFSTERVTANSWESGLFILFL 408
++Q T T L A+V+RTGF TS+G+L+R+IL+ ++ LF+L L
Sbjct: 365 VIQ-TRFYTGELVK------AIVVRTGFSTSKGQLVRSILYPKPTDFKLYRDAYLFLLCL 417
Query: 409 VVFAVIAAGYVLKKGMEDPTRSKYKLFLSCSLIITSVIPPELPMELSIAVNTSLIALARR 468
V A I Y + + + + + S IIT +PP LP ++ + + L +
Sbjct: 418 VAVAGIGFIYTIINSILNEVQVGVIIIESLD-IITITVPPALPAAMTAGIVYAQRRLKKI 476
Query: 469 GIFCTEPFRIPFAGKVDMCCFDKTGTLTSDDMEFRGVVGLSNAEL----EDDMTKVPVRT 524
GIFC P RI G++++ CFDKTGTLT D ++ G+ + NA E+ ++ V++
Sbjct: 477 GIFCISPQRINICGQLNLVCFDKTGTLTEDGLDLWGIQRVENARFLSPEENVCNEMLVKS 536
Query: 525 QEI--LASCHALVFVDNKLVGDPLEKAALKGIDW--------SYKSDEKAMP-------- 566
Q + +A+CH+L ++ L GDPL+ + I W + MP
Sbjct: 537 QFVACMATCHSLTKIEGVLSGDPLDLKMFEAIGWILEEATEEETALHNRIMPTVVRPPKQ 596
Query: 567 ----KRGGGNA------------VQIVQRHHFASHLKRMSVVVRV--QEEFFAFVKGAPE 608
GN + IV++ F+S L+RMSVV RV + A++KGAPE
Sbjct: 597 LLPESTPAGNQEMELFELPATYEIGIVRQFPFSSALQRMSVVARVLGDRKMDAYMKGAPE 656
Query: 609 TIQD--RLTDLPSSYIETYKKYTHQGSRVLALAFKSLPD-MTVSDARSLHRDEVENGLTF 665
I + +P + + +T QG RV+ALA + L +T +++ RD +EN + F
Sbjct: 657 AIAGLCKPETVPVDFQNVLEDFTKQGFRVIALAHRKLESKLTWHKVQNISRDAIENNMDF 716
Query: 666 AGFAVFNCPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIV--TKPVLI--L 721
G + +++++ +L +L ++ M+TGD LTA VA ++ V+I
Sbjct: 717 MGLIIMQNKLKQETPAVLEDLHKANIRTVMVTGDSMLTAVSVARDCGMILPQDKVIIAEA 776
Query: 722 CPVKNGKV--YEWVSPDETEKIQYS---EKEVEGLTDAHD-----------LCIGGDCFE 765
P K+GKV W D + + + E + HD + G F
Sbjct: 777 LPPKDGKVAKINWHYADSLTQCSHPSAIDPEAIPVKLVHDSLEDLQMTRYHFAMNGKSFS 836
Query: 766 MLQQ--TSAVLRVIPYVKVFARVAPEQKELILTTFKAVGRMTLMCGDGTNDVGALKQAHV 823
++ + V +++ + VFAR+AP+QK ++ + V MCGDG ND GALK+AH
Sbjct: 837 VILEHFQDLVPKLMLHGTVFARMAPDQKTQLIEALQNVDYFVGMCGDGANDCGALKRAHG 896
Query: 824 GVAL 827
G++L
Sbjct: 897 GISL 900
|
Homo sapiens (taxid: 9606) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: - |
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 1191 | ||||||
| 255544367 | 1193 | cation-transporting atpase 13a1, putativ | 1.0 | 0.998 | 0.855 | 0.0 | |
| 225463226 | 1191 | PREDICTED: probable cation-transporting | 0.997 | 0.997 | 0.851 | 0.0 | |
| 359480896 | 1189 | PREDICTED: probable cation-transporting | 0.995 | 0.997 | 0.852 | 0.0 | |
| 224122746 | 1185 | p-type ATPase transporter [Populus trich | 0.990 | 0.995 | 0.832 | 0.0 | |
| 224145681 | 1188 | p-type ATPase transporter [Populus trich | 0.992 | 0.994 | 0.826 | 0.0 | |
| 449442871 | 1192 | PREDICTED: LOW QUALITY PROTEIN: probable | 0.997 | 0.996 | 0.829 | 0.0 | |
| 356516439 | 1188 | PREDICTED: probable cation-transporting | 0.996 | 0.999 | 0.825 | 0.0 | |
| 356508902 | 1180 | PREDICTED: probable cation-transporting | 0.989 | 0.999 | 0.828 | 0.0 | |
| 15237798 | 1179 | putative cation-transporting ATPase [Ara | 0.984 | 0.994 | 0.786 | 0.0 | |
| 297812517 | 1179 | predicted protein [Arabidopsis lyrata su | 0.984 | 0.994 | 0.786 | 0.0 |
| >gi|255544367|ref|XP_002513245.1| cation-transporting atpase 13a1, putative [Ricinus communis] gi|223547619|gb|EEF49113.1| cation-transporting atpase 13a1, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 2126 bits (5509), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 1021/1193 (85%), Positives = 1102/1193 (92%), Gaps = 2/1193 (0%)
Query: 1 MLSFHVGGKVVDRVDLLRKKHWVWRLDVWPFAILYSGWLIAIVPSIDFGDAAIVLGGLVA 60
ML F VGGKVV+RVDLLRKKHW WRLDVWPFAILY W+ A+VPSIDFGDA IVLG LVA
Sbjct: 1 MLRFDVGGKVVERVDLLRKKHWGWRLDVWPFAILYLIWVTAVVPSIDFGDATIVLGALVA 60
Query: 61 FHILVWLFTAWSVDFKCFAHYSKINDIHLADACKITPVKFCGSKEVVPLQFWKQSAVSST 120
HIL WLFTAWSVDFKCF YSK +DIH+ADACKITP KF GSKEVVPL KQ SST
Sbjct: 61 LHILSWLFTAWSVDFKCFVQYSKGSDIHVADACKITPAKFSGSKEVVPLHLRKQLESSST 120
Query: 121 PVDEDEICFDFRKQHFIYSREKGTFCKLPYPTKETFGYYLKCTGHSTEAKIAVATEKWGR 180
P +EI FDFRKQ FIYS+EK TFCKLPYPTKETFGYYLKC+GH +E+K+A ATEKWGR
Sbjct: 121 PGHVEEIYFDFRKQRFIYSKEKNTFCKLPYPTKETFGYYLKCSGHGSESKVAAATEKWGR 180
Query: 181 NVFEYPQPTFQKLMKENCMEPFFVFQVFCVGLWCLDEYWYYSLFTLFMLFMFESTMAKSR 240
N FEYPQPTFQKLMKE+CMEPFFVFQVFCVGLWCLDEYWYYSLFTLFMLFMFESTMAKSR
Sbjct: 181 NAFEYPQPTFQKLMKEHCMEPFFVFQVFCVGLWCLDEYWYYSLFTLFMLFMFESTMAKSR 240
Query: 241 LKTLTEIRRVRVDNQTIMVHRCGKWVKLAGTDLVPGDVVSIGRSSGQTGEDKSVPADMLI 300
LKTL+E+RRVRVD QT+MVHRCGKWVKL+GTDL+PGDVVSIGRSSGQ GEDKSVPADML+
Sbjct: 241 LKTLSELRRVRVDGQTLMVHRCGKWVKLSGTDLLPGDVVSIGRSSGQNGEDKSVPADMLL 300
Query: 301 LGGSAIVNEAILTGESTPQWKVSIMGRETGEKLSARRDKSHVLFGGTKILQHTPDKTFPL 360
+ GSAIVNEAILTGESTPQWKVSIMGR EKLSA+RDK+HVLFGGTK+LQHTPDKTFPL
Sbjct: 301 IAGSAIVNEAILTGESTPQWKVSIMGRGNEEKLSAKRDKTHVLFGGTKVLQHTPDKTFPL 360
Query: 361 KTPDGGCLAVVLRTGFETSQGKLMRTILFSTERVTANSWESGLFILFLVVFAVIAAGYVL 420
+TPDGGCLAVVLRTGFETSQGKLMRTILFSTERVTANSWESGLFILFLVVFAVIAAGYVL
Sbjct: 361 RTPDGGCLAVVLRTGFETSQGKLMRTILFSTERVTANSWESGLFILFLVVFAVIAAGYVL 420
Query: 421 KKGMEDPTRSKYKLFLSCSLIITSVIPPELPMELSIAVNTSLIALARRGIFCTEPFRIPF 480
KKG+EDPTRSKYKLFLSCSLIITSVIPPELPMELSIAVNTSLIALARRGIFCTEPFRIPF
Sbjct: 421 KKGLEDPTRSKYKLFLSCSLIITSVIPPELPMELSIAVNTSLIALARRGIFCTEPFRIPF 480
Query: 481 AGKVDMCCFDKTGTLTSDDMEFRGVVGLSNA-ELEDDMTKVPVRTQEILASCHALVFVDN 539
AGKVD+CCFDKTGTLTSDDMEF GVVGL++ +LE DM+KVPVRT E+LASCHALVFVDN
Sbjct: 481 AGKVDICCFDKTGTLTSDDMEFCGVVGLTDGMDLESDMSKVPVRTVEVLASCHALVFVDN 540
Query: 540 KLVGDPLEKAALKGIDWSYKSDEKAMPKRGGGNAVQIVQRHHFASHLKRMSVVVRVQEEF 599
KLVGDPLEKAALKGIDWSYKSDEKAMPK+GGGNAVQIVQRHHFASHLKRM+VVVR+ EEF
Sbjct: 541 KLVGDPLEKAALKGIDWSYKSDEKAMPKKGGGNAVQIVQRHHFASHLKRMAVVVRINEEF 600
Query: 600 FAFVKGAPETIQDRLTDLPSSYIETYKKYTHQGSRVLALAFKSLPDMTVSDARSLHRDEV 659
FAFVKGAPETIQDRLTDLP SYI TYKK+T QGSRVLALA+KSLPDMTVS+ARS+ RD V
Sbjct: 601 FAFVKGAPETIQDRLTDLPQSYIATYKKFTRQGSRVLALAYKSLPDMTVSEARSMDRDVV 660
Query: 660 ENGLTFAGFAVFNCPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVL 719
ENGL FAGFAVFNCPIR DSA ILSELKNSS DL MITGDQALTAC+VASQVHI+TKP L
Sbjct: 661 ENGLIFAGFAVFNCPIRADSATILSELKNSSHDLVMITGDQALTACHVASQVHIITKPAL 720
Query: 720 ILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLTDAHDLCIGGDCFEMLQQTSAVLRVIPY 779
IL P ++ + YEW+SPDE+E I+YS+KEV L + HDLCIGGDC ML+Q SA L+VIP+
Sbjct: 721 ILGPARDTEGYEWISPDESEIIRYSDKEVGALAETHDLCIGGDCIAMLEQGSATLQVIPH 780
Query: 780 VKVFARVAPEQKELILTTFKAVGRMTLMCGDGTNDVGALKQAHVGVALLNAVPPTQSGNS 839
VKVFARVAPEQKELI+TTFK VGRMTLMCGDGTNDVGALKQAHVGVALLNAVPP QSGNS
Sbjct: 781 VKVFARVAPEQKELIMTTFKMVGRMTLMCGDGTNDVGALKQAHVGVALLNAVPPAQSGNS 840
Query: 840 SSEASKDENTKSVKSKKSKSASEAASKAMSLNSEGTSKGKASARLEANSRTAGNRHLTAA 899
S+E SKD N KSVKSKKSK SE A KA +LN EG+SKGK A+ ++++++AGNRHLTAA
Sbjct: 841 SAEISKDGNLKSVKSKKSKLISEVARKAGNLNGEGSSKGKVVAKPDSSNQSAGNRHLTAA 900
Query: 900 EMQREKLKKMMEELNEEGDGRSAPIVKLGDASMASPFTAKHASVAPTTDIIRQGRSTLVT 959
EMQR+KLKK+M+E+NEEGDGRSAPIVKLGDASMASPFTAKHASV+PTTD+IRQGRSTLVT
Sbjct: 901 EMQRQKLKKLMDEMNEEGDGRSAPIVKLGDASMASPFTAKHASVSPTTDVIRQGRSTLVT 960
Query: 960 TLQMFKILGLNCLATAYVLSVMYLDGVKLGDVQATISGVFTAAFFLFISHARPLPTLSAA 1019
TLQMFKILGLNCLATAYVLSVMYLDGVKLGDVQATISGVFTAAFFLFISHARPLPTLSA
Sbjct: 961 TLQMFKILGLNCLATAYVLSVMYLDGVKLGDVQATISGVFTAAFFLFISHARPLPTLSAE 1020
Query: 1020 RPHPNIFCSYVFLSLMGQFAIHLFFLISSVKEAEKYMPDECIEPDADFHPNLVNTVSYMV 1079
RPHPNIFCSYVFLSLMGQF IHLFFL++SVKEAEK+MPDECIEPD+DFHPNLVNTVSYMV
Sbjct: 1021 RPHPNIFCSYVFLSLMGQFTIHLFFLMTSVKEAEKHMPDECIEPDSDFHPNLVNTVSYMV 1080
Query: 1080 NMMIQVATFAVNYMGHPFNQSISENKPFMYALMGAVGFFTVITSDLLRSLNDWLKLVPLP 1139
+MM+QVATFAVNYMGHPFNQSI+ENKPF+YAL+ AVGFFTVITSDL R LNDWLKLVPLP
Sbjct: 1081 SMMLQVATFAVNYMGHPFNQSITENKPFLYALLAAVGFFTVITSDLFRDLNDWLKLVPLP 1140
Query: 1140 SGLRDKLLIWAGLMFLGCYSWERFLRWAFPGKVPAWRKRQRLAAANLE-KKHV 1191
GLRDKLLIWA LMFL CY+WER LRWAFPG++PAWRKRQ+LA +NLE KKHV
Sbjct: 1141 PGLRDKLLIWAFLMFLICYTWERLLRWAFPGRIPAWRKRQQLADSNLENKKHV 1193
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225463226|ref|XP_002272397.1| PREDICTED: probable cation-transporting ATPase-like isoform 1 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 2108 bits (5463), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 1013/1190 (85%), Positives = 1094/1190 (91%), Gaps = 2/1190 (0%)
Query: 1 MLSFHVGGKVVDRVDLLRKKHWVWRLDVWPFAILYSGWLIAIVPSIDFGDAAIVLGGLVA 60
ML FHVGGKVV+ VDLLRK+HW WRLDVWPFAILY+ WL+ +VPSID DA IV GGLV
Sbjct: 1 MLRFHVGGKVVEDVDLLRKRHWPWRLDVWPFAILYTIWLVTVVPSIDISDAIIVFGGLVV 60
Query: 61 FHILVWLFTAWSVDFKCFAHYSKINDIHLADACKITPVKFCGSKEVVPLQFWKQSAVSST 120
HILVWLFTAWSV+F+CF YSK+N I ADACKITP KF GSKE+VPL F Q SS+
Sbjct: 61 LHILVWLFTAWSVEFRCFVQYSKVNSIQQADACKITPAKFSGSKEIVPLHFRMQMTDSSS 120
Query: 121 PVDEDEICFDFRKQHFIYSREKGTFCKLPYPTKETFGYYLKCTGHSTEAKIAVATEKWGR 180
D +EI FDFRKQ FIYS+EK TF KL YP+KE+FGYY K TGH +EAK+ ATEKWGR
Sbjct: 121 SSDVEEIYFDFRKQCFIYSKEKETFFKLSYPSKESFGYYHKSTGHGSEAKVVAATEKWGR 180
Query: 181 NVFEYPQPTFQKLMKENCMEPFFVFQVFCVGLWCLDEYWYYSLFTLFMLFMFESTMAKSR 240
NVFEYPQPTFQKLMKENCMEPFFVFQVFCVGLWCLDEYWYYSLFTLFMLFMFESTMAKSR
Sbjct: 181 NVFEYPQPTFQKLMKENCMEPFFVFQVFCVGLWCLDEYWYYSLFTLFMLFMFESTMAKSR 240
Query: 241 LKTLTEIRRVRVDNQTIMVHRCGKWVKLAGTDLVPGDVVSIGRSSGQTGEDKSVPADMLI 300
LKTLTE+RRVRVDNQTIMVHRCGKWVKL+GT+L+PGDVVSIGRSSGQ GEDK+VPADMLI
Sbjct: 241 LKTLTELRRVRVDNQTIMVHRCGKWVKLSGTELLPGDVVSIGRSSGQNGEDKTVPADMLI 300
Query: 301 LGGSAIVNEAILTGESTPQWKVSIMGRETGEKLSARRDKSHVLFGGTKILQHTPDKTFPL 360
L GSAIVNEAILTGESTPQWKVSIMGR EKLS +RDK+HVLFGGTKILQHTPDKT L
Sbjct: 301 LAGSAIVNEAILTGESTPQWKVSIMGRGNEEKLSVKRDKNHVLFGGTKILQHTPDKTVHL 360
Query: 361 KTPDGGCLAVVLRTGFETSQGKLMRTILFSTERVTANSWESGLFILFLVVFAVIAAGYVL 420
KTPDGGCLAVVLRTGFETSQGKLMRTILFSTERVTANSWESGLFILFLV+FAVIAAGYVL
Sbjct: 361 KTPDGGCLAVVLRTGFETSQGKLMRTILFSTERVTANSWESGLFILFLVIFAVIAAGYVL 420
Query: 421 KKGMEDPTRSKYKLFLSCSLIITSVIPPELPMELSIAVNTSLIALARRGIFCTEPFRIPF 480
KKG+EDPTRSKYKLFLSCSLIITSVIPPELPMELSIAVNTSLIALARRGIFCTEPFRIPF
Sbjct: 421 KKGLEDPTRSKYKLFLSCSLIITSVIPPELPMELSIAVNTSLIALARRGIFCTEPFRIPF 480
Query: 481 AGKVDMCCFDKTGTLTSDDMEFRGVVGLSN-AELEDDMTKVPVRTQEILASCHALVFVDN 539
AGKVD+CCFDKTGTLTSDDMEFRGV GL++ A+LE DM+KVP RT EILASCHALVFVDN
Sbjct: 481 AGKVDICCFDKTGTLTSDDMEFRGVTGLTDAADLESDMSKVPARTVEILASCHALVFVDN 540
Query: 540 KLVGDPLEKAALKGIDWSYKSDEKAMPKRGGGNAVQIVQRHHFASHLKRMSVVVRVQEEF 599
KLVGDPLEKAALKGIDWSYKSDEKA+PK+G G AVQIV+RHHFAS+LKRMSVVVRVQEEF
Sbjct: 541 KLVGDPLEKAALKGIDWSYKSDEKAVPKKGSGQAVQIVKRHHFASYLKRMSVVVRVQEEF 600
Query: 600 FAFVKGAPETIQDRLTDLPSSYIETYKKYTHQGSRVLALAFKSLPDMTVSDARSLHRDEV 659
AFVKGAPETIQ+RL DLP SY+ETYKKYT QGSRVLALAFKSLP+MTVS+AR++ RD V
Sbjct: 601 LAFVKGAPETIQERLVDLPPSYVETYKKYTRQGSRVLALAFKSLPEMTVSEARNMDRDVV 660
Query: 660 ENGLTFAGFAVFNCPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVL 719
E+GLTFAGFAVFNCPIR DSA +LSELK SS DLAMITGDQALTAC+VA QVHI++KP L
Sbjct: 661 ESGLTFAGFAVFNCPIRADSATVLSELKGSSHDLAMITGDQALTACHVAGQVHIISKPTL 720
Query: 720 ILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLTDAHDLCIGGDCFEMLQQTSAVLRVIPY 779
IL P +N + YEW+SPDETE I+YS KEVE L++ HDLCIGGDCFEMLQQTSAVL+VIP+
Sbjct: 721 ILGPARNSEGYEWISPDETEIIRYSAKEVEALSETHDLCIGGDCFEMLQQTSAVLQVIPF 780
Query: 780 VKVFARVAPEQKELILTTFKAVGRMTLMCGDGTNDVGALKQAHVGVALLNAVPPTQSGNS 839
VKVFARVAPEQKELILTTFK VGRMTLMCGDGTNDVGALKQAHVGVALLNA+PPTQ+G S
Sbjct: 781 VKVFARVAPEQKELILTTFKTVGRMTLMCGDGTNDVGALKQAHVGVALLNAMPPTQTGGS 840
Query: 840 SSEASKDENTKSVKSKKSKSASEAASKAMSLNSEGTSKGKASARLEANSRTAGNRHLTAA 899
SSEASKDE +KSVKSKK K A+E +KA+SLN EG SKG+++++ E+ S +A NRHLTAA
Sbjct: 841 SSEASKDETSKSVKSKKPKPATE-TTKALSLNGEGPSKGRSASKSESTSHSAANRHLTAA 899
Query: 900 EMQREKLKKMMEELNEEGDGRSAPIVKLGDASMASPFTAKHASVAPTTDIIRQGRSTLVT 959
EMQR+KLKK+M+ELNEEGDGR+ PIVKLGDASMASPFTAKHASVAPTTDIIRQGRSTLVT
Sbjct: 900 EMQRQKLKKLMDELNEEGDGRAVPIVKLGDASMASPFTAKHASVAPTTDIIRQGRSTLVT 959
Query: 960 TLQMFKILGLNCLATAYVLSVMYLDGVKLGDVQATISGVFTAAFFLFISHARPLPTLSAA 1019
TLQMFKILGLNCLATAYVLSVMYLDGVKLGDVQATISGVFTAAFFLFISHARPLPTLSAA
Sbjct: 960 TLQMFKILGLNCLATAYVLSVMYLDGVKLGDVQATISGVFTAAFFLFISHARPLPTLSAA 1019
Query: 1020 RPHPNIFCSYVFLSLMGQFAIHLFFLISSVKEAEKYMPDECIEPDADFHPNLVNTVSYMV 1079
RPHP++FCSYV LSL+GQFA+HLFFLISSVKEAEKYMPDECIEPD+DFHPNLVNTVSYMV
Sbjct: 1020 RPHPHVFCSYVLLSLLGQFALHLFFLISSVKEAEKYMPDECIEPDSDFHPNLVNTVSYMV 1079
Query: 1080 NMMIQVATFAVNYMGHPFNQSISENKPFMYALMGAVGFFTVITSDLLRSLNDWLKLVPLP 1139
NMMIQVATFAVNYMGHPFNQSI ENKPF YAL GAVGFFTVITSDL R LNDWLKLVP+P
Sbjct: 1080 NMMIQVATFAVNYMGHPFNQSIPENKPFFYALFGAVGFFTVITSDLFRDLNDWLKLVPMP 1139
Query: 1140 SGLRDKLLIWAGLMFLGCYSWERFLRWAFPGKVPAWRKRQRLAAANLEKK 1189
GLR+KLLIWA LMFLGCYSWER LRW FPG++PAW+KRQR+AAANLEKK
Sbjct: 1140 VGLRNKLLIWAFLMFLGCYSWERLLRWVFPGRIPAWKKRQRMAAANLEKK 1189
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|359480896|ref|XP_003632541.1| PREDICTED: probable cation-transporting ATPase-like isoform 2 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 2107 bits (5460), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 1014/1190 (85%), Positives = 1095/1190 (92%), Gaps = 4/1190 (0%)
Query: 1 MLSFHVGGKVVDRVDLLRKKHWVWRLDVWPFAILYSGWLIAIVPSIDFGDAAIVLGGLVA 60
ML FHVGGKVV+ VDLLRK+HW WRLDVWPFAILY+ WL+ +VPSID DA IV GGLV
Sbjct: 1 MLRFHVGGKVVEDVDLLRKRHWPWRLDVWPFAILYTIWLVTVVPSIDISDAIIVFGGLVV 60
Query: 61 FHILVWLFTAWSVDFKCFAHYSKINDIHLADACKITPVKFCGSKEVVPLQFWKQSAVSST 120
HILVWLFTAWSV+F+CF YSK+N I ADACKITP KF GSKE+VPL F K VSS+
Sbjct: 61 LHILVWLFTAWSVEFRCFVQYSKVNSIQQADACKITPAKFSGSKEIVPLHFRK--LVSSS 118
Query: 121 PVDEDEICFDFRKQHFIYSREKGTFCKLPYPTKETFGYYLKCTGHSTEAKIAVATEKWGR 180
D +EI FDFRKQ FIYS+EK TF KL YP+KE+FGYY K TGH +EAK+ ATEKWGR
Sbjct: 119 SSDVEEIYFDFRKQCFIYSKEKETFFKLSYPSKESFGYYHKSTGHGSEAKVVAATEKWGR 178
Query: 181 NVFEYPQPTFQKLMKENCMEPFFVFQVFCVGLWCLDEYWYYSLFTLFMLFMFESTMAKSR 240
NVFEYPQPTFQKLMKENCMEPFFVFQVFCVGLWCLDEYWYYSLFTLFMLFMFESTMAKSR
Sbjct: 179 NVFEYPQPTFQKLMKENCMEPFFVFQVFCVGLWCLDEYWYYSLFTLFMLFMFESTMAKSR 238
Query: 241 LKTLTEIRRVRVDNQTIMVHRCGKWVKLAGTDLVPGDVVSIGRSSGQTGEDKSVPADMLI 300
LKTLTE+RRVRVDNQTIMVHRCGKWVKL+GT+L+PGDVVSIGRSSGQ GEDK+VPADMLI
Sbjct: 239 LKTLTELRRVRVDNQTIMVHRCGKWVKLSGTELLPGDVVSIGRSSGQNGEDKTVPADMLI 298
Query: 301 LGGSAIVNEAILTGESTPQWKVSIMGRETGEKLSARRDKSHVLFGGTKILQHTPDKTFPL 360
L GSAIVNEAILTGESTPQWKVSIMGR EKLS +RDK+HVLFGGTKILQHTPDKT L
Sbjct: 299 LAGSAIVNEAILTGESTPQWKVSIMGRGNEEKLSVKRDKNHVLFGGTKILQHTPDKTVHL 358
Query: 361 KTPDGGCLAVVLRTGFETSQGKLMRTILFSTERVTANSWESGLFILFLVVFAVIAAGYVL 420
KTPDGGCLAVVLRTGFETSQGKLMRTILFSTERVTANSWESGLFILFLV+FAVIAAGYVL
Sbjct: 359 KTPDGGCLAVVLRTGFETSQGKLMRTILFSTERVTANSWESGLFILFLVIFAVIAAGYVL 418
Query: 421 KKGMEDPTRSKYKLFLSCSLIITSVIPPELPMELSIAVNTSLIALARRGIFCTEPFRIPF 480
KKG+EDPTRSKYKLFLSCSLIITSVIPPELPMELSIAVNTSLIALARRGIFCTEPFRIPF
Sbjct: 419 KKGLEDPTRSKYKLFLSCSLIITSVIPPELPMELSIAVNTSLIALARRGIFCTEPFRIPF 478
Query: 481 AGKVDMCCFDKTGTLTSDDMEFRGVVGLSN-AELEDDMTKVPVRTQEILASCHALVFVDN 539
AGKVD+CCFDKTGTLTSDDMEFRGV GL++ A+LE DM+KVP RT EILASCHALVFVDN
Sbjct: 479 AGKVDICCFDKTGTLTSDDMEFRGVTGLTDAADLESDMSKVPARTVEILASCHALVFVDN 538
Query: 540 KLVGDPLEKAALKGIDWSYKSDEKAMPKRGGGNAVQIVQRHHFASHLKRMSVVVRVQEEF 599
KLVGDPLEKAALKGIDWSYKSDEKA+PK+G G AVQIV+RHHFAS+LKRMSVVVRVQEEF
Sbjct: 539 KLVGDPLEKAALKGIDWSYKSDEKAVPKKGSGQAVQIVKRHHFASYLKRMSVVVRVQEEF 598
Query: 600 FAFVKGAPETIQDRLTDLPSSYIETYKKYTHQGSRVLALAFKSLPDMTVSDARSLHRDEV 659
AFVKGAPETIQ+RL DLP SY+ETYKKYT QGSRVLALAFKSLP+MTVS+AR++ RD V
Sbjct: 599 LAFVKGAPETIQERLVDLPPSYVETYKKYTRQGSRVLALAFKSLPEMTVSEARNMDRDVV 658
Query: 660 ENGLTFAGFAVFNCPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVL 719
E+GLTFAGFAVFNCPIR DSA +LSELK SS DLAMITGDQALTAC+VA QVHI++KP L
Sbjct: 659 ESGLTFAGFAVFNCPIRADSATVLSELKGSSHDLAMITGDQALTACHVAGQVHIISKPTL 718
Query: 720 ILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLTDAHDLCIGGDCFEMLQQTSAVLRVIPY 779
IL P +N + YEW+SPDETE I+YS KEVE L++ HDLCIGGDCFEMLQQTSAVL+VIP+
Sbjct: 719 ILGPARNSEGYEWISPDETEIIRYSAKEVEALSETHDLCIGGDCFEMLQQTSAVLQVIPF 778
Query: 780 VKVFARVAPEQKELILTTFKAVGRMTLMCGDGTNDVGALKQAHVGVALLNAVPPTQSGNS 839
VKVFARVAPEQKELILTTFK VGRMTLMCGDGTNDVGALKQAHVGVALLNA+PPTQ+G S
Sbjct: 779 VKVFARVAPEQKELILTTFKTVGRMTLMCGDGTNDVGALKQAHVGVALLNAMPPTQTGGS 838
Query: 840 SSEASKDENTKSVKSKKSKSASEAASKAMSLNSEGTSKGKASARLEANSRTAGNRHLTAA 899
SSEASKDE +KSVKSKK K A+E +KA+SLN EG SKG+++++ E+ S +A NRHLTAA
Sbjct: 839 SSEASKDETSKSVKSKKPKPATE-TTKALSLNGEGPSKGRSASKSESTSHSAANRHLTAA 897
Query: 900 EMQREKLKKMMEELNEEGDGRSAPIVKLGDASMASPFTAKHASVAPTTDIIRQGRSTLVT 959
EMQR+KLKK+M+ELNEEGDGR+ PIVKLGDASMASPFTAKHASVAPTTDIIRQGRSTLVT
Sbjct: 898 EMQRQKLKKLMDELNEEGDGRAVPIVKLGDASMASPFTAKHASVAPTTDIIRQGRSTLVT 957
Query: 960 TLQMFKILGLNCLATAYVLSVMYLDGVKLGDVQATISGVFTAAFFLFISHARPLPTLSAA 1019
TLQMFKILGLNCLATAYVLSVMYLDGVKLGDVQATISGVFTAAFFLFISHARPLPTLSAA
Sbjct: 958 TLQMFKILGLNCLATAYVLSVMYLDGVKLGDVQATISGVFTAAFFLFISHARPLPTLSAA 1017
Query: 1020 RPHPNIFCSYVFLSLMGQFAIHLFFLISSVKEAEKYMPDECIEPDADFHPNLVNTVSYMV 1079
RPHP++FCSYV LSL+GQFA+HLFFLISSVKEAEKYMPDECIEPD+DFHPNLVNTVSYMV
Sbjct: 1018 RPHPHVFCSYVLLSLLGQFALHLFFLISSVKEAEKYMPDECIEPDSDFHPNLVNTVSYMV 1077
Query: 1080 NMMIQVATFAVNYMGHPFNQSISENKPFMYALMGAVGFFTVITSDLLRSLNDWLKLVPLP 1139
NMMIQVATFAVNYMGHPFNQSI ENKPF YAL GAVGFFTVITSDL R LNDWLKLVP+P
Sbjct: 1078 NMMIQVATFAVNYMGHPFNQSIPENKPFFYALFGAVGFFTVITSDLFRDLNDWLKLVPMP 1137
Query: 1140 SGLRDKLLIWAGLMFLGCYSWERFLRWAFPGKVPAWRKRQRLAAANLEKK 1189
GLR+KLLIWA LMFLGCYSWER LRW FPG++PAW+KRQR+AAANLEKK
Sbjct: 1138 VGLRNKLLIWAFLMFLGCYSWERLLRWVFPGRIPAWKKRQRMAAANLEKK 1187
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224122746|ref|XP_002330462.1| p-type ATPase transporter [Populus trichocarpa] gi|222871874|gb|EEF09005.1| p-type ATPase transporter [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 2075 bits (5375), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 989/1188 (83%), Positives = 1081/1188 (90%), Gaps = 8/1188 (0%)
Query: 4 FHVGGKVVDRVDLLRKKHWVWRLDVWPFAILYSGWLIAIVPSIDFGDAAIVLGGLVAFHI 63
F+VGGKVV+RVDL+RKK W WRLD++PFAILY+ W++ +VPSID DA IVLGGLVA H+
Sbjct: 1 FNVGGKVVERVDLIRKKKWPWRLDIFPFAILYAIWMVTVVPSIDIVDAFIVLGGLVAIHV 60
Query: 64 LVWLFTAWSVDFKCFAHYSKINDIHLADACKITPVKFCGSKEVVPLQFWKQSAVSSTPVD 123
LV LFTAWSVDFKCF YSK+NDI AD CK+TP KF GSKEVVPL +QSA SS+P D
Sbjct: 61 LVLLFTAWSVDFKCFVQYSKVNDIRAADTCKVTPAKFSGSKEVVPLYIRQQSATSSSPGD 120
Query: 124 EDEICFDFRKQHFIYSREKGTFCKLPYPTKETFGYYLKCTGHSTEAKIAVATEKWGRNVF 183
+EI FDFRKQ FIYS+E TFCKLPYPTKETFG+YLK TGH +EAK+A ATEKWGRNVF
Sbjct: 121 GEEIYFDFRKQWFIYSKENETFCKLPYPTKETFGHYLKSTGHGSEAKVAAATEKWGRNVF 180
Query: 184 EYPQPTFQKLMKENCMEPFFVFQVFCVGLWCLDEYWYYSLFTLFMLFMFESTMAKSRLKT 243
EYPQPTFQKL+KE CMEPFFVFQVFCVGLWCLDEYWYYSLFTLFMLFMFESTMAKSRLKT
Sbjct: 181 EYPQPTFQKLLKEQCMEPFFVFQVFCVGLWCLDEYWYYSLFTLFMLFMFESTMAKSRLKT 240
Query: 244 LTEIRRVRVDNQTIMVHRCGKWVKLAGTDLVPGDVVSIGRSSGQTGEDKSVPADMLILGG 303
L+E+RRVRVD QTIMVHRCGKWVKL+GTDL+PGDVVSIGRSSGQ GEDKSVPADML+L G
Sbjct: 241 LSELRRVRVDTQTIMVHRCGKWVKLSGTDLLPGDVVSIGRSSGQHGEDKSVPADMLLLAG 300
Query: 304 SAIVNEAILTGESTPQWKV-SIMGRETGEKLSARRDKSHVLFGGTKILQHTPDKTFPLKT 362
SAI+NEAILTGESTPQWKV SI GR EKLSA+RDK+HVLFGGTKILQHTPDK FPL+
Sbjct: 301 SAILNEAILTGESTPQWKVVSITGRGMEEKLSAKRDKNHVLFGGTKILQHTPDKNFPLRA 360
Query: 363 PDGGCLAVVLRTGFETSQGKLMRTILFSTERVTANSWESGLFILFLVVFAVIAAGYVLKK 422
PDGGCLAVVLRTGFETSQGKLMRTILFSTERVTANSWESGLFILFLVVFAVIAAGYVLKK
Sbjct: 361 PDGGCLAVVLRTGFETSQGKLMRTILFSTERVTANSWESGLFILFLVVFAVIAAGYVLKK 420
Query: 423 GMEDPTRSKYKLFLSCSLIITSVIPPELPMELSIAVNTSLIALARRGIFCTEPFRIPFAG 482
G+EDPTRSKYKLFLSCSLIITSVIPPELPMELSIAVNTSLIALARRGIFCTEPFRIPFAG
Sbjct: 421 GLEDPTRSKYKLFLSCSLIITSVIPPELPMELSIAVNTSLIALARRGIFCTEPFRIPFAG 480
Query: 483 KVDMCCFDKTGTLTSDDMEFRGVVGLS-NAELEDDMTKVPVRTQEILASCHALVFVDNKL 541
KVD+CCFDKTGTLTSDDMEFRGVVGL+ +A+LE DMTKVPVRT EILASCHALVFVDNKL
Sbjct: 481 KVDICCFDKTGTLTSDDMEFRGVVGLTESADLESDMTKVPVRTAEILASCHALVFVDNKL 540
Query: 542 VGDPLEKAALKGIDWSYKSDEKAMPKRGGGNAVQIVQRHHFASHLKRMSVVVRVQEEFFA 601
VGDPLEKAAL GIDWSYKSDEKAMPK+GGGNAVQIVQRHHFASHLKRM+VVVR QEEF A
Sbjct: 541 VGDPLEKAALTGIDWSYKSDEKAMPKKGGGNAVQIVQRHHFASHLKRMAVVVRTQEEFLA 600
Query: 602 FVKGAPETIQDRLTDLPSSYIETYKKYTHQGSRVLALAFKSLPDMTVSDARSLHRDEVEN 661
FVKGAPETIQDRL DLP SY++TYKKYT QGSRVLALAFK LPDMTVS+ARSL RD VE
Sbjct: 601 FVKGAPETIQDRLIDLPPSYVDTYKKYTRQGSRVLALAFKYLPDMTVSEARSLDRDVVET 660
Query: 662 GLTFAGFAVFNCPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLIL 721
GL FAGFAVFNCPIREDSA +LSELKNSS DL MITGDQALTAC+VASQVHI++KP LIL
Sbjct: 661 GLAFAGFAVFNCPIREDSASVLSELKNSSHDLVMITGDQALTACHVASQVHIISKPALIL 720
Query: 722 CPVKNGKVYEWVSPDETEKIQYSEKEVEGLTDAHDLCIGGDCFEMLQQTSAVLRVIPYVK 781
P ++G+ YEW+SPDE EKI Y +K E L++ HDLCIGGDC +MLQQ+SAVL+VIPYVK
Sbjct: 721 GPSRSGEGYEWISPDEMEKISYGDKGAEELSETHDLCIGGDCIDMLQQSSAVLQVIPYVK 780
Query: 782 VFARVAPEQKELILTTFKAVGRMTLMCGDGTNDVGALKQAHVGVALLNAVPPTQSGNSSS 841
VFARVAPEQKELILTTFK VGR+TLMCGDGTNDVGALKQAHVGVALLNAVPPT+SGNSSS
Sbjct: 781 VFARVAPEQKELILTTFKTVGRVTLMCGDGTNDVGALKQAHVGVALLNAVPPTKSGNSSS 840
Query: 842 EASKDENTKSVKSKKSKSASEAASKAMSLNSEGTSKGKASARLEANSRTAGNRHLTAAEM 901
E KD N K + ++ + +LN E +S+ KA + +++S+TAGNRH TAAEM
Sbjct: 841 ETPKDGNL------KPSKSKKSKPEVSNLNGESSSRAKAVTKSDSSSQTAGNRHQTAAEM 894
Query: 902 QREKLKKMMEELNEEGDGRSAPIVKLGDASMASPFTAKHASVAPTTDIIRQGRSTLVTTL 961
QR++LKK+MEE+NEEGDGRSAPIVKLGDASMASPFTAKHASVAPTTDIIRQGRSTLVTTL
Sbjct: 895 QRQRLKKLMEEMNEEGDGRSAPIVKLGDASMASPFTAKHASVAPTTDIIRQGRSTLVTTL 954
Query: 962 QMFKILGLNCLATAYVLSVMYLDGVKLGDVQATISGVFTAAFFLFISHARPLPTLSAARP 1021
QMFKILGLNCLATAYVLSVMYLDGVKLGDVQATISGVFTAAFFLFIS ARPLPTLSA RP
Sbjct: 955 QMFKILGLNCLATAYVLSVMYLDGVKLGDVQATISGVFTAAFFLFISQARPLPTLSAERP 1014
Query: 1022 HPNIFCSYVFLSLMGQFAIHLFFLISSVKEAEKYMPDECIEPDADFHPNLVNTVSYMVNM 1081
HP++FC YVFLSLMGQFAIHLFFL+SSVK AEKYMPDECIEPD+DFHPNLVNTVSYMV+M
Sbjct: 1015 HPHVFCFYVFLSLMGQFAIHLFFLMSSVKSAEKYMPDECIEPDSDFHPNLVNTVSYMVSM 1074
Query: 1082 MIQVATFAVNYMGHPFNQSISENKPFMYALMGAVGFFTVITSDLLRSLNDWLKLVPLPSG 1141
M+Q+ATFAVNY+GHPFNQSI+E+KPF+YA++ A GFFTVITSDL R+LNDWLKLVPLP
Sbjct: 1075 MLQLATFAVNYIGHPFNQSITESKPFLYAILAAAGFFTVITSDLFRNLNDWLKLVPLPPE 1134
Query: 1142 LRDKLLIWAGLMFLGCYSWERFLRWAFPGKVPAWRKRQRLAAANLEKK 1189
LR+KLLIWA LMFL CY+WE+ LRWAFPG++P+W+KRQRLAAANLEKK
Sbjct: 1135 LRNKLLIWALLMFLSCYTWEKLLRWAFPGRIPSWKKRQRLAAANLEKK 1182
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224145681|ref|XP_002325729.1| p-type ATPase transporter [Populus trichocarpa] gi|222862604|gb|EEF00111.1| p-type ATPase transporter [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 2047 bits (5304), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 988/1195 (82%), Positives = 1080/1195 (90%), Gaps = 13/1195 (1%)
Query: 3 SFHVGGKVVDRVDLLRKKHWVWRLDVWPFAILYSGWLIAIVPSIDFGDAAIVLGGLVAFH 62
+F+VGGKVV+RVDL+RKK W WR D+ PFAILY+ W++ IVPSID DA IVLGGLV+ H
Sbjct: 1 TFNVGGKVVERVDLIRKKKWPWRFDILPFAILYAVWMVTIVPSIDIVDALIVLGGLVSIH 60
Query: 63 ILVWLFTAWSVDFKCFAHYSKINDIHLADACKITPVKFCGSKEVVPLQFWKQSAVSSTPV 122
+L LFTAWSVDFKCF YSK+NDI+ AD+CK+TP KF GSKEVVPL +QSA SST
Sbjct: 61 VLALLFTAWSVDFKCFVQYSKVNDIYAADSCKVTPAKFSGSKEVVPLHIRQQSAASSTSG 120
Query: 123 DEDEICFDFRKQHFIYSREKGTFCKLPYPTKETFGYYLKCTGHSTEAKIAVATEKWGRNV 182
D +E FDFRKQ FIYS+E GTF KLPYPTKETFGYYLK TGH +EAK+A A EKWGRNV
Sbjct: 121 DVEEFYFDFRKQCFIYSKENGTFRKLPYPTKETFGYYLKSTGHGSEAKVAAAAEKWGRNV 180
Query: 183 FEYPQPTFQKLMKENCMEPFFVFQVFCVGLWCLDEYWYYSLFTLFMLFMFESTMAKSRLK 242
FEYPQPTFQKL+KE CMEPFFVFQVFCVGLWCLDE+WYYSLFTLFMLFMFESTMAKSRLK
Sbjct: 181 FEYPQPTFQKLLKEQCMEPFFVFQVFCVGLWCLDEFWYYSLFTLFMLFMFESTMAKSRLK 240
Query: 243 TLTEIRRVRVDNQTIMVHRCGKWVKLAGTDLVPGDVVSIGRSSGQTGEDKSVPADMLILG 302
TL+E+RRVRVD QT+MVHRCGKWVKL+GTDL+PGDVVSIGRSSGQ GEDKSVPAD+L+L
Sbjct: 241 TLSELRRVRVDTQTVMVHRCGKWVKLSGTDLLPGDVVSIGRSSGQNGEDKSVPADLLLLA 300
Query: 303 GSAIVNEAILTGESTPQWKV-SIMGRETGEKLSARRDKSHVLFGGTKILQHTPDKTFPLK 361
GSAIVNEAILTGESTPQWKV SIMGR T EKLSA+RDK+HVLFGGTKILQHTPDKTFPL+
Sbjct: 301 GSAIVNEAILTGESTPQWKVVSIMGRGTEEKLSAKRDKNHVLFGGTKILQHTPDKTFPLR 360
Query: 362 TPDGGCLAVVLRTGFETSQGKLMRTILFSTERVTANSWESGLFILFLVVFAVIAAGYVLK 421
PDGGCLAVVLRTGFETSQGKLMRTILFSTERVTANSWESGLFILFL+VFA+IAAGYVLK
Sbjct: 361 APDGGCLAVVLRTGFETSQGKLMRTILFSTERVTANSWESGLFILFLLVFAIIAAGYVLK 420
Query: 422 K---GMEDPTRSKYKLFLSCSLIITSVIPPELPMELSIAVNTSLIALARRGIFCTEPFRI 478
K G+EDPTRSKYKLFLSCSLIITSVIPPELPMELSIAVNTSLIALARRGIFCTEPFRI
Sbjct: 421 KASDGLEDPTRSKYKLFLSCSLIITSVIPPELPMELSIAVNTSLIALARRGIFCTEPFRI 480
Query: 479 PFAGKVDMCCFDKTGTLTSDDMEFRGVVGLSNA-ELEDDMTKVPVRTQEILASCHALVFV 537
PFAGKVD+CCFDKTGTLTSDDMEF GVVG + + +LE DMTKVP T EILASCHALVFV
Sbjct: 481 PFAGKVDICCFDKTGTLTSDDMEFCGVVGQTESTDLETDMTKVPACTAEILASCHALVFV 540
Query: 538 DNKLVGDPLEKAALKGIDWSYKSDEKAMPKRGGGNAVQIVQRHHFASHLKRMSVVVRVQE 597
DNKLVGDPLEKAALKGIDWSYKSDEKAMPK+GGGNAVQIVQRHHFASHLKRM+VVVR+QE
Sbjct: 541 DNKLVGDPLEKAALKGIDWSYKSDEKAMPKKGGGNAVQIVQRHHFASHLKRMAVVVRIQE 600
Query: 598 EFFAFVKGAPETIQDRLTDLPSSYIETYKKYTHQGSRVLALAFKSLPDMTVSDARSLHRD 657
EF AFVKGAPETIQDRL DLPSSY++TYKKYT QGSRVLALAFK+LPDMTV +ARSL RD
Sbjct: 601 EFLAFVKGAPETIQDRLVDLPSSYVDTYKKYTRQGSRVLALAFKNLPDMTVGEARSLDRD 660
Query: 658 EVENGLTFAGFAVFNCPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKP 717
VE GLTFAGFAVFNCPIR DSA +LSELKNSS DL MITGDQALTAC+VASQVHI++KP
Sbjct: 661 VVETGLTFAGFAVFNCPIRADSAAVLSELKNSSHDLVMITGDQALTACHVASQVHIISKP 720
Query: 718 VLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLTDAHDLCIGGDCFEMLQQTSAVLRVI 777
LILCP +G+ YEW+SPDE EKI Y +KE E L++ HDLCIGGDC EMLQQ+SAVLRVI
Sbjct: 721 ALILCP-SSGQGYEWISPDEMEKISYGDKEAEELSETHDLCIGGDCIEMLQQSSAVLRVI 779
Query: 778 PYVKVFARVAPEQKELILTTFKAVGRMTLMCGDGTNDVGALKQAHVGVALLNAVPPTQSG 837
PYVKVFARVAPEQKELILTTFK VGR+TLMCGDGTNDVGALKQAHVGVALLNAVPPTQSG
Sbjct: 780 PYVKVFARVAPEQKELILTTFKTVGRITLMCGDGTNDVGALKQAHVGVALLNAVPPTQSG 839
Query: 838 NSSSEASKDENTKSVKSKKSKSASEAASKAMSLNSEGTSKGKASARLEANSRTAGNRHLT 897
N SSE KD + K + + + +LN E +S+GKA +R ++ S++AGNRHLT
Sbjct: 840 NKSSETPKD------GTPKLSKSKKPKPEVSNLNGESSSRGKAVSRSDSASQSAGNRHLT 893
Query: 898 AAEMQREKLKKMMEELNEEGDGRSAPIVKLGDASMASPFTAKHASVAPTTDIIRQGRSTL 957
AEMQR++LKK+MEE+NEEGDGRSAPIVKLGDASMASPFTAKHASVAPTTDIIRQGRSTL
Sbjct: 894 PAEMQRQRLKKLMEEMNEEGDGRSAPIVKLGDASMASPFTAKHASVAPTTDIIRQGRSTL 953
Query: 958 VTTLQMFKILGLNCLATAYVLSVMYLDGVKLGDVQATISGVFTAAFFLFISHARPLPTLS 1017
VTTLQMFKILGLNCLATAYVLSVMYLDGVKLGDVQATISGVFTAAFFLFIS ARPLPTLS
Sbjct: 954 VTTLQMFKILGLNCLATAYVLSVMYLDGVKLGDVQATISGVFTAAFFLFISQARPLPTLS 1013
Query: 1018 AARPHPNIFCSYVFLSLMGQFAIHLFFLISSVKEAEKYMPDECIEPDADFHPNLVNTVSY 1077
A RPHPNIFC YVFLSLMGQFAIHLFFL+SSVK AEKYMPDECIEPD++FHPNLVNTVSY
Sbjct: 1014 AERPHPNIFCFYVFLSLMGQFAIHLFFLMSSVKSAEKYMPDECIEPDSNFHPNLVNTVSY 1073
Query: 1078 MVNMMIQVATFAVNYMGHPFNQSISENKPFMYALMGAVGFFTVITSDLLRSLNDWLKLVP 1137
MV+MM+Q+ATFAVNY+GHPFNQSI+E+KPF+YAL+ A GFFTVITSDL R+LNDWLKLVP
Sbjct: 1074 MVSMMLQLATFAVNYIGHPFNQSITESKPFLYALLAASGFFTVITSDLFRNLNDWLKLVP 1133
Query: 1138 LPSGLRDKLLIWAGLMFLGCYSWERFLRWAFPGKVPAWRKRQRLAAANLE-KKHV 1191
LP LR+KLLIWA LMFL CY+WER L+WAFPG++PAW+KRQRLA AN+E KKHV
Sbjct: 1134 LPPELRNKLLIWAVLMFLSCYTWERLLKWAFPGRIPAWKKRQRLAVANVEKKKHV 1188
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449442871|ref|XP_004139204.1| PREDICTED: LOW QUALITY PROTEIN: probable cation-transporting ATPase-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 2035 bits (5271), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 987/1190 (82%), Positives = 1076/1190 (90%), Gaps = 2/1190 (0%)
Query: 1 MLSFHVGGKVVDRVDLLRKKHWVWRLDVWPFAILYSGWLIAIVPSIDFGDAAIVLGGLVA 60
ML FHVGGKVV+RVDLLRKKHW WR D+WPFAILY+ WL +VPSIDFGDA IVLGGL A
Sbjct: 1 MLRFHVGGKVVERVDLLRKKHWAWRFDLWPFAILYAAWLAVVVPSIDFGDAFIVLGGLAA 60
Query: 61 FHILVWLFTAWSVDFKCFAHYSKINDIHLADACKITPVKFCGSKEVVPLQFWKQSAVSST 120
H+LV LFTAWSVDFKCF YS++NDI+ AD CKI P KF GSKE+V L F K A S++
Sbjct: 61 LHVLVLLFTAWSVDFKCFVQYSQVNDIYFADTCKIVPAKFSGSKEIVSLHFRKLLAGSTS 120
Query: 121 PVDEDEICFDFRKQHFIYSREKGTFCKLPYPTKETFGYYLKCTGHSTEAKIAVATEKWGR 180
VD +EI FDFRKQ FIYS+EK FCKLPYPTKETFGYYLK TG+ +E K+ A EKWGR
Sbjct: 121 AVDLEEIYFDFRKQRFIYSKEKENFCKLPYPTKETFGYYLKNTGYGSEPKVVAAVEKWGR 180
Query: 181 NVFEYPQPTFQKLMKENCMEPFFVFQVFCVGLWCLDEYWYYSLFTLFMLFMFESTMAKSR 240
N+FEYPQPTFQKLMKE CMEPFFVFQVFCVGLWCLDEYWYYSLFTLFMLFMFESTMAKSR
Sbjct: 181 NIFEYPQPTFQKLMKEQCMEPFFVFQVFCVGLWCLDEYWYYSLFTLFMLFMFESTMAKSR 240
Query: 241 LKTLTEIRRVRVDNQTIMVHRCGKWVKLAGTDLVPGDVVSIGRSSGQTGEDKSVPADMLI 300
LKTL+E+RRVRVD QT+MVHRCGKWVKL GT+L+PGDVVSIGR SGQ+G+DKSVPADMLI
Sbjct: 241 LKTLSELRRVRVDTQTLMVHRCGKWVKLPGTELLPGDVVSIGRDSGQSGDDKSVPADMLI 300
Query: 301 LGGSAIVNEAILTGESTPQWKVSIMGRETGEKLSARRDKSHVLFGGTKILQHTPDKTFPL 360
L GSAI NEAILTGESTPQWKVSI GR EKLSA+RDKSHVLFGGTKILQHTPDKTFPL
Sbjct: 301 LAGSAIANEAILTGESTPQWKVSITGRGIDEKLSAKRDKSHVLFGGTKILQHTPDKTFPL 360
Query: 361 KTPDGGCLAVVLRTGFETSQGKLMRTILFSTERVTANSWESGLFILFLVVFAVIAAGYVL 420
+TPDGGCLAVVLRTGFETSQGKLMRTILFSTERVTANSWESGLFI+FLVVFAVIAAGYVL
Sbjct: 361 RTPDGGCLAVVLRTGFETSQGKLMRTILFSTERVTANSWESGLFIMFLVVFAVIAAGYVL 420
Query: 421 KKGMEDPTRSKYKLFLSCSLIITSVIPPELPMELSIAVNTSLIALARRGIFCTEPFRIPF 480
KG+EDPTRSKYKLFLSCSLIITSVIPPELPMELSIAVNTSLIALARRGIFCTEPFRIPF
Sbjct: 421 VKGLEDPTRSKYKLFLSCSLIITSVIPPELPMELSIAVNTSLIALARRGIFCTEPFRIPF 480
Query: 481 AGKVDMCCFDKTGTLTSDDMEFRGVVGLSNA-ELEDDMTKVPVRTQEILASCHALVFVDN 539
AGKVD+CCFDKTGTLTSDDMEFRGVVGLS+ ELE DMT V +RT EILASCHALVFVDN
Sbjct: 481 AGKVDICCFDKTGTLTSDDMEFRGVVGLSDKEELETDMTSVSLRTVEILASCHALVFVDN 540
Query: 540 KLVGDPLEKAALKGIDWSYKSDEKAMPKRGGGNAVQIVQRHHFASHLKRMSVVVRVQEEF 599
KLVGDPLEKAALKG+DW YKSDEKA+P++G GNAVQIVQRHHFAS+LKRM+VVVR+QEEF
Sbjct: 541 KLVGDPLEKAALKGVDWIYKSDEKAVPRKGSGNAVQIVQRHHFASYLKRMAVVVRLQEEF 600
Query: 600 FAFVKGAPETIQDRLTDLPSSYIETYKKYTHQGSRVLALAFKSLPDMTVSDARSLHRDEV 659
FAFVKGAPETIQ+RLTD+PS Y+ETYKKYT QGSRVLALA+KSLPDMTVS R L RD V
Sbjct: 601 FAFVKGAPETIQERLTDVPSFYVETYKKYTRQGSRVLALAYKSLPDMTVSXIRGLDRDLV 660
Query: 660 ENGLTFAGFAVFNCPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVL 719
E+ LTFAGFAVFNCPIR DSA ILSELK SS DL MITGDQALTAC+VASQVHI +K +L
Sbjct: 661 ESDLTFAGFAVFNCPIRADSATILSELKGSSHDLVMITGDQALTACHVASQVHITSKQIL 720
Query: 720 ILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLTDAHDLCIGGDCFEMLQQTSAVLRVIPY 779
IL +K + Y+W+SPDE++ + YSEKEV L++ +DLCIGGDC MLQ+TS VL VIPY
Sbjct: 721 ILNSMKGTEEYKWLSPDESQTVPYSEKEVGTLSETYDLCIGGDCIAMLQRTSTVLDVIPY 780
Query: 780 VKVFARVAPEQKELILTTFKAVGRMTLMCGDGTNDVGALKQAHVGVALLNAVPPTQSGNS 839
VKVFARVAPEQKELILTTFK VGRMTLMCGDGTNDVGALKQAHVG+ALLNAVPP QSGNS
Sbjct: 781 VKVFARVAPEQKELILTTFKTVGRMTLMCGDGTNDVGALKQAHVGIALLNAVPPPQSGNS 840
Query: 840 SSEASKDENTKSVKSKKSKSASEAASKAMSLNSEGTSKGKASARLEANSRTAGNRHLTAA 899
SSEASKDE + KSKKSK +SE++ KA+ ++ EG+SK K SA+L++ + A NR T A
Sbjct: 841 SSEASKDEAVRPGKSKKSKPSSESSGKAL-VSGEGSSKSKVSAKLDSAAEQASNRARTPA 899
Query: 900 EMQREKLKKMMEELNEEGDGRSAPIVKLGDASMASPFTAKHASVAPTTDIIRQGRSTLVT 959
EMQR+KLKK+M+ELNEEGDGRSAPIVKLGDASMASPFTAKHASVAPTTDIIRQGRSTLVT
Sbjct: 900 EMQRQKLKKLMDELNEEGDGRSAPIVKLGDASMASPFTAKHASVAPTTDIIRQGRSTLVT 959
Query: 960 TLQMFKILGLNCLATAYVLSVMYLDGVKLGDVQATISGVFTAAFFLFISHARPLPTLSAA 1019
TLQMFKILGLNCLATAYVLSVMYLDGVKLGD+QATISGVFTAAFFLFISHARPLPTLSA
Sbjct: 960 TLQMFKILGLNCLATAYVLSVMYLDGVKLGDIQATISGVFTAAFFLFISHARPLPTLSAE 1019
Query: 1020 RPHPNIFCSYVFLSLMGQFAIHLFFLISSVKEAEKYMPDECIEPDADFHPNLVNTVSYMV 1079
RPHP++FCSYV LSL+GQFAIHL FLISSVKEAEK+MPDECIEPD+DFHPNLVNTVSYMV
Sbjct: 1020 RPHPHVFCSYVLLSLLGQFAIHLCFLISSVKEAEKHMPDECIEPDSDFHPNLVNTVSYMV 1079
Query: 1080 NMMIQVATFAVNYMGHPFNQSISENKPFMYALMGAVGFFTVITSDLLRSLNDWLKLVPLP 1139
+MM+QVATFAVNYMGHPFNQS+SENKPF+YAL+ AVGFFTVITSDL R LNDWLKLVPLP
Sbjct: 1080 SMMLQVATFAVNYMGHPFNQSVSENKPFLYALLAAVGFFTVITSDLFRDLNDWLKLVPLP 1139
Query: 1140 SGLRDKLLIWAGLMFLGCYSWERFLRWAFPGKVPAWRKRQRLAAANLEKK 1189
+G+RDKLL WA LMFL CY+WER LR+ FPGK+PAWRKRQRL AANLEKK
Sbjct: 1140 AGMRDKLLAWAFLMFLCCYAWERLLRFMFPGKIPAWRKRQRLVAANLEKK 1189
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356516439|ref|XP_003526902.1| PREDICTED: probable cation-transporting ATPase-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 2023 bits (5242), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 984/1192 (82%), Positives = 1081/1192 (90%), Gaps = 5/1192 (0%)
Query: 1 MLSFHVGGKVVDRVDLLRKKHWVWRLDVWPFAILYSGWLIAIVPSIDFGDAAIVLGGLVA 60
M SFHVGGKVVDRVDLLRKK W WRLDVWPFAILY WL AI+PS+DF DAAIV G LV+
Sbjct: 1 MSSFHVGGKVVDRVDLLRKKQWPWRLDVWPFAILYGAWLSAILPSLDFVDAAIVFGALVS 60
Query: 61 FHILVWLFTAWSVDFKCFAHYSKINDIHLADACKITPVKFCGSKEVVPLQFWKQSAVSST 120
HILV+LFT WSVDFKCFAHYSK+ +I AD+CKITP KF G+KEVVPL K SA SS+
Sbjct: 61 LHILVFLFTGWSVDFKCFAHYSKVKNIDQADSCKITPAKFSGAKEVVPLHSRKSSAGSSS 120
Query: 121 PVDEDEICFDFRKQHFIYSREKGTFCKLPYPTKETFGYYLKCTGHSTEAKIAVATEKWGR 180
VD +E FDFRKQ F+YS+EKGTFCKL YPTKETFGYYLKC+GH +EAK+ ATEKWGR
Sbjct: 121 AVDLEENYFDFRKQCFVYSKEKGTFCKLSYPTKETFGYYLKCSGHGSEAKVLAATEKWGR 180
Query: 181 NVFEYPQPTFQKLMKENCMEPFFVFQVFCVGLWCLDEYWYYSLFTLFMLFMFESTMAKSR 240
NVF+YPQPTFQKLMKE+CMEPFFVFQVFCVGLWCLDEYWYYSLFTLFMLFMFESTMAKSR
Sbjct: 181 NVFDYPQPTFQKLMKEHCMEPFFVFQVFCVGLWCLDEYWYYSLFTLFMLFMFESTMAKSR 240
Query: 241 LKTLTEIRRVRVDNQTIMVHRCGKWVKLAGTDLVPGDVVSIGRSSGQTGEDKSVPADMLI 300
LKTLTE+RRVRVD+Q +MVHRCGKWVKL+GT+L+PGDVVSIGRSSGQ GE+KSVPADML+
Sbjct: 241 LKTLTELRRVRVDSQILMVHRCGKWVKLSGTELLPGDVVSIGRSSGQNGEEKSVPADMLL 300
Query: 301 LGGSAIVNEAILTGESTPQWKVSIMGRETGEKLSARRDKSHVLFGGTKILQHTPDKTFPL 360
L GS IVNEAILTGESTPQWK+SI GR E LSAR+DK+HVLFGGTKILQHTPDK+FPL
Sbjct: 301 LAGSVIVNEAILTGESTPQWKISIAGRGMEETLSARQDKNHVLFGGTKILQHTPDKSFPL 360
Query: 361 KTPDGGCLAVVLRTGFETSQGKLMRTILFSTERVTANSWESGLFILFLVVFAVIAAGYVL 420
KTPDGGCLAV+LRTGFETSQGKLMRTILFSTERVTANSWESG FILFLVVFA+IAAGYVL
Sbjct: 361 KTPDGGCLAVILRTGFETSQGKLMRTILFSTERVTANSWESGFFILFLVVFALIAAGYVL 420
Query: 421 KKGMEDPTRSKYKLFLSCSLIITSVIPPELPMELSIAVNTSLIALARRGIFCTEPFRIPF 480
KG+EDPTRSKYKL LSCSLI+TSVIPPELPMELSIAVNTSLIALARRGIFCTEPFRIPF
Sbjct: 421 VKGLEDPTRSKYKLILSCSLIVTSVIPPELPMELSIAVNTSLIALARRGIFCTEPFRIPF 480
Query: 481 AGKVDMCCFDKTGTLTSDDMEFRGVVGLS-NAELEDDMTKVPVRTQEILASCHALVFVDN 539
AGKVD+CCFDKTGTLTSDDMEF G+VGL+ +LE D +KVP+RT EILASCHALVFV+N
Sbjct: 481 AGKVDICCFDKTGTLTSDDMEFSGIVGLNGTTDLESDTSKVPLRTVEILASCHALVFVEN 540
Query: 540 KLVGDPLEKAALKGIDWSYKSDEKAMPKRGGGNAVQIVQRHHFASHLKRMSVVVRVQEEF 599
KLVGDPLEKAALKGIDWSYKSD+KA+PK+G G+ VQIV R+HFASHLKRM+VVVR+QEEF
Sbjct: 541 KLVGDPLEKAALKGIDWSYKSDDKAVPKKGNGHPVQIVHRYHFASHLKRMAVVVRIQEEF 600
Query: 600 FAFVKGAPETIQDRLTDLPSSYIETYKKYTHQGSRVLALAFKSLPDMTVSDARSLHRDEV 659
FAFVKGAPE IQDRL D+P SY+ETYKKYT QGSRVLALA+KSL DMTVS+ARSL R V
Sbjct: 601 FAFVKGAPEVIQDRLVDIPPSYVETYKKYTRQGSRVLALAYKSLADMTVSEARSLDRGIV 660
Query: 660 ENGLTFAGFAVFNCPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVL 719
E+GLTFAGF VFNCPIR DSA +L+ELK SS DL MITGDQALTAC+VASQVHI++KP L
Sbjct: 661 ESGLTFAGFVVFNCPIRSDSATVLAELKESSHDLVMITGDQALTACHVASQVHIISKPTL 720
Query: 720 ILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLTDAHDLCIGGDCFEMLQQTSAVLRVIPY 779
IL P +NG+ Y W+SPDETE I+YSEKEVE L++ HDLCIGGDC EMLQQTSA LRVIPY
Sbjct: 721 ILGPAQNGEGYNWMSPDETENIRYSEKEVESLSETHDLCIGGDCIEMLQQTSAHLRVIPY 780
Query: 780 VKVFARVAPEQKELILTTFKAVGRMTLMCGDGTNDVGALKQAHVGVALLNAVPPTQSGNS 839
VKVFARVAPEQKELI+TTFK VGR+TLMCGDGTNDVGALKQAHVG+ALLNA+PPTQSGNS
Sbjct: 781 VKVFARVAPEQKELIMTTFKMVGRLTLMCGDGTNDVGALKQAHVGIALLNALPPTQSGNS 840
Query: 840 SSEASKDENTKSVKSKKSKSASEAASKAMSLNSEGTSKGKASARLEANSRTAGNRHLTAA 899
SS++SK+E +KS K KKSK A++ + K EGTSK K +++ ++ S ++GNRH A
Sbjct: 841 SSDSSKEEGSKSGKQKKSKPAADTSGKTA---GEGTSKAKVASKSDSASHSSGNRHQAAV 897
Query: 900 EMQREKLKKMMEELNEEGDGRSAPIVKLGDASMASPFTAKHASVAPTTDIIRQGRSTLVT 959
EMQR+KLKKMM+ELNEEGDGR APIVKLGDASMASPFTAKHASVAPTTDIIRQGRSTLVT
Sbjct: 898 EMQRQKLKKMMDELNEEGDGR-APIVKLGDASMASPFTAKHASVAPTTDIIRQGRSTLVT 956
Query: 960 TLQMFKILGLNCLATAYVLSVMYLDGVKLGDVQATISGVFTAAFFLFISHARPLPTLSAA 1019
TLQMFKILGLNCLATAYVLSVMYLDGVKLGD+QATISG+FTAAFFLFISHARPLPTLSA
Sbjct: 957 TLQMFKILGLNCLATAYVLSVMYLDGVKLGDIQATISGIFTAAFFLFISHARPLPTLSAE 1016
Query: 1020 RPHPNIFCSYVFLSLMGQFAIHLFFLISSVKEAEKYMPDECIEPDADFHPNLVNTVSYMV 1079
RPHPNIFC+YVFLSL+GQF+IHL FLISSVKEAEK+MPDECIEPDADFHPNLVNTVSYMV
Sbjct: 1017 RPHPNIFCAYVFLSLLGQFSIHLLFLISSVKEAEKHMPDECIEPDADFHPNLVNTVSYMV 1076
Query: 1080 NMMIQVATFAVNYMGHPFNQSISENKPFMYALMGAVGFFTVITSDLLRSLNDWLKLVPLP 1139
+MM+QVATFAVNYMGHPFNQSISEN+PF YAL+ AV FFTVITSDL R LNDWLKLVPLP
Sbjct: 1077 SMMLQVATFAVNYMGHPFNQSISENRPFRYALVAAVVFFTVITSDLFRDLNDWLKLVPLP 1136
Query: 1140 SGLRDKLLIWAGLMFLGCYSWERFLRWAFPGKVPAWRKRQRLAAANLEKKHV 1191
GLRDKLL+WA LMFL CYSWER LRWAFPGK+PAW+KRQRLA +NLEKK V
Sbjct: 1137 VGLRDKLLLWAFLMFLVCYSWERLLRWAFPGKIPAWKKRQRLAVSNLEKKQV 1188
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356508902|ref|XP_003523192.1| PREDICTED: probable cation-transporting ATPase-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 2021 bits (5236), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 987/1192 (82%), Positives = 1076/1192 (90%), Gaps = 13/1192 (1%)
Query: 1 MLSFHVGGKVVDRVDLLRKKHWVWRLDVWPFAILYSGWLIAIVPSIDFGDAAIVLGGLVA 60
M SFHVGGKVVD+VDLLRKK W WRLDVWPFAILY WL I+PS+DF DAAIV G LV+
Sbjct: 1 MSSFHVGGKVVDQVDLLRKKRWPWRLDVWPFAILYGAWLSTILPSLDFVDAAIVFGALVS 60
Query: 61 FHILVWLFTAWSVDFKCFAHYSKINDIHLADACKITPVKFCGSKEVVPLQFWKQSAVSST 120
HILV+LFT WSVDFKCFAHYSK+ +I AD+CKITP KF GSKEVVPL K SA SS+
Sbjct: 61 LHILVFLFTGWSVDFKCFAHYSKVKNIDQADSCKITPAKFSGSKEVVPLHSRKSSAASSS 120
Query: 121 PVDEDEICFDFRKQHFIYSREKGTFCKLPYPTKETFGYYLKCTGHSTEAKIAVATEKWGR 180
VD +E FDFRKQ F++S+EKGTFCKL YPTKETFGYYLKC+GH +EAK+ ATEKWGR
Sbjct: 121 AVDLEENYFDFRKQCFVHSKEKGTFCKLSYPTKETFGYYLKCSGHGSEAKVLAATEKWGR 180
Query: 181 NVFEYPQPTFQKLMKENCMEPFFVFQVFCVGLWCLDEYWYYSLFTLFMLFMFESTMAKSR 240
NVF+YPQPTFQKLMKE+CMEPFFVFQVFCVGLWCLDEYWYYSLFTLFMLFMFESTMAKSR
Sbjct: 181 NVFDYPQPTFQKLMKEHCMEPFFVFQVFCVGLWCLDEYWYYSLFTLFMLFMFESTMAKSR 240
Query: 241 LKTLTEIRRVRVDNQTIMVHRCGKWVKLAGTDLVPGDVVSIGRSSGQTGEDKSVPADMLI 300
LKTLTE+RRVRVD+Q +MVHRCGKWVKL+GTDL+PGDVVSIGRSSGQ GE+KSVPADML+
Sbjct: 241 LKTLTELRRVRVDSQILMVHRCGKWVKLSGTDLLPGDVVSIGRSSGQNGEEKSVPADMLL 300
Query: 301 LGGSAIVNEAILTGESTPQWKVSIMGRETGEKLSARRDKSHVLFGGTKILQHTPDKTFPL 360
L GS IVNEAILTGESTPQWK+SI GR E LSA+RDK+HVLFGGTKILQHTPDK+FPL
Sbjct: 301 LAGSVIVNEAILTGESTPQWKISIAGRAMEETLSAKRDKNHVLFGGTKILQHTPDKSFPL 360
Query: 361 KTPDGGCLAVVLRTGFETSQGKLMRTILFSTERVTANSWESGLFILFLVVFAVIAAGYVL 420
KTPDGGCLAV+LRTGFETSQGKLMRTILFSTERVTANSWESG FILFLVVFA+IAAGYVL
Sbjct: 361 KTPDGGCLAVILRTGFETSQGKLMRTILFSTERVTANSWESGFFILFLVVFALIAAGYVL 420
Query: 421 KKGMEDPTRSKYKLFLSCSLIITSVIPPELPMELSIAVNTSLIALARRGIFCTEPFRIPF 480
KG+EDPTRSKYKL LSCSLI+TSVIPPELPMELSIAVNTSLIALARRGIFCTEPFRIPF
Sbjct: 421 VKGLEDPTRSKYKLILSCSLIVTSVIPPELPMELSIAVNTSLIALARRGIFCTEPFRIPF 480
Query: 481 AGKVDMCCFDKTGTLTSDDMEFRGVVGLS-NAELEDDMTKVPVRTQEILASCHALVFVDN 539
AGKVD+CCFDKTGTLTSDDMEF GVVGL+ +LE D +KVPVRT EILASCHALVFV+N
Sbjct: 481 AGKVDICCFDKTGTLTSDDMEFSGVVGLNGTTDLESDTSKVPVRTVEILASCHALVFVEN 540
Query: 540 KLVGDPLEKAALKGIDWSYKSDEKAMPKRGGGNAVQIVQRHHFASHLKRMSVVVRVQEEF 599
KLVGDPLEKAAL+GIDWSYKSD+KA+PK+G G VQIV R+HFASHLKRM+VVVR+QEEF
Sbjct: 541 KLVGDPLEKAALRGIDWSYKSDDKAVPKKGTGQPVQIVHRYHFASHLKRMAVVVRIQEEF 600
Query: 600 FAFVKGAPETIQDRLTDLPSSYIETYKKYTHQGSRVLALAFKSLPDMTVSDARSLHRDEV 659
FAFVKGAPE IQDRL D+P SY+ETYKKYT QGSRVLALA+KSL DMTVS+ARSL RD V
Sbjct: 601 FAFVKGAPEVIQDRLIDIPPSYVETYKKYTRQGSRVLALAYKSLDDMTVSEARSLDRDIV 660
Query: 660 ENGLTFAGFAVFNCPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVL 719
E+ LTFAGF VFNCPIR DSA +LSELK SS DL MITGDQALTAC+VASQVHI++KP L
Sbjct: 661 ESRLTFAGFVVFNCPIRSDSATVLSELKESSHDLVMITGDQALTACHVASQVHIISKPTL 720
Query: 720 ILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLTDAHDLCIGGDCFEMLQQTSAVLRVIPY 779
IL P +NG+ Y WVSPDETE I YSEKEVE L++ HDLCIGGDC EMLQQTSA LRVIPY
Sbjct: 721 ILGPTRNGEGYNWVSPDETENIHYSEKEVESLSETHDLCIGGDCIEMLQQTSAHLRVIPY 780
Query: 780 VKVFARVAPEQKELILTTFKAVGRMTLMCGDGTNDVGALKQAHVGVALLNAVPPTQSGNS 839
VKVFARVAPEQKELI+TTFK VGR+TLMCGDGTNDVGALKQAHVG+ALLNA+PPTQSGNS
Sbjct: 781 VKVFARVAPEQKELIMTTFKTVGRLTLMCGDGTNDVGALKQAHVGIALLNALPPTQSGNS 840
Query: 840 SSEASKDENTKSVKSKKSKSASEAASKAMSLNSEGTSKGKASARLEANSRTAGNRHLTAA 899
SS++SK+E +KS K KKSK A SEGTSK K +++ ++ S ++GNRH A
Sbjct: 841 SSDSSKEEGSKSGKQKKSKPA-----------SEGTSKAKVASKSDSTSHSSGNRHQAAV 889
Query: 900 EMQREKLKKMMEELNEEGDGRSAPIVKLGDASMASPFTAKHASVAPTTDIIRQGRSTLVT 959
EMQR+KLKKMM+ELNEEGDGR APIVKLGDASMASPFTAKHASVAPTTDIIRQGRSTLVT
Sbjct: 890 EMQRQKLKKMMDELNEEGDGR-APIVKLGDASMASPFTAKHASVAPTTDIIRQGRSTLVT 948
Query: 960 TLQMFKILGLNCLATAYVLSVMYLDGVKLGDVQATISGVFTAAFFLFISHARPLPTLSAA 1019
TLQMFKILGLNCLATAYVLSVMYLDGVKLGD+QATISGVFTAAFFLFISHARPLPTLSA
Sbjct: 949 TLQMFKILGLNCLATAYVLSVMYLDGVKLGDIQATISGVFTAAFFLFISHARPLPTLSAE 1008
Query: 1020 RPHPNIFCSYVFLSLMGQFAIHLFFLISSVKEAEKYMPDECIEPDADFHPNLVNTVSYMV 1079
RPHPNIFC+YVFLSL+GQF+IHL FLISSVKEAEK+MPDECIEPDADFHPNLVNTVSYMV
Sbjct: 1009 RPHPNIFCAYVFLSLLGQFSIHLLFLISSVKEAEKHMPDECIEPDADFHPNLVNTVSYMV 1068
Query: 1080 NMMIQVATFAVNYMGHPFNQSISENKPFMYALMGAVGFFTVITSDLLRSLNDWLKLVPLP 1139
+MM+QVATFAVNYMGHPFNQSISEN+PF YAL+ AV FFTVITSDL R LNDWLKLVPLP
Sbjct: 1069 SMMLQVATFAVNYMGHPFNQSISENRPFRYALVAAVVFFTVITSDLFRDLNDWLKLVPLP 1128
Query: 1140 SGLRDKLLIWAGLMFLGCYSWERFLRWAFPGKVPAWRKRQRLAAANLEKKHV 1191
+GLRDKLL+WA LMFL CYSWER LRWAFPGK+PAW+KRQRLA +NLEKK V
Sbjct: 1129 AGLRDKLLLWAFLMFLVCYSWERLLRWAFPGKIPAWKKRQRLAVSNLEKKQV 1180
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|15237798|ref|NP_197752.1| putative cation-transporting ATPase [Arabidopsis thaliana] gi|12229714|sp|Q9LT02.1|ATY1_ARATH RecName: Full=Probable cation-transporting ATPase gi|8809697|dbj|BAA97238.1| cation-transporting ATPase [Arabidopsis thaliana] gi|332005809|gb|AED93192.1| putative cation-transporting ATPase [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 1930 bits (5000), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 938/1192 (78%), Positives = 1029/1192 (86%), Gaps = 19/1192 (1%)
Query: 1 MLSFHVGGKVVDRVDLLRKKHWVWRLDVWPFAILYSGWLIAIVPSIDFGDAAIVLGGLVA 60
M SF VGGKVV++VDL RKK VWRLDVWPFAILY+ WL IVPSIDF DA I LGGL A
Sbjct: 1 MSSFRVGGKVVEKVDLCRKKQLVWRLDVWPFAILYTVWLTTIVPSIDFSDACIALGGLSA 60
Query: 61 FHILVWLFTAWSVDFKCFAHYSKINDIHLADACKITPVKFCGSKEVVPLQFWKQSAVSST 120
FHILV LFT WSVDFKCF +SK+N I ADACK+TP KF GSKEVVPL F Q S++
Sbjct: 61 FHILVLLFTTWSVDFKCFVQFSKVNSIDQADACKVTPAKFSGSKEVVPLHFRSQMTDSAS 120
Query: 121 PVDEDEICFDFRKQHFIYSREKGTFCKLPYPTKETFGYYLKCTGHSTEAKIAVATEKWGR 180
D +EI FDFRKQ FIYS+E G F KLPYPTKETFG+YLKCTGH TEAKIA ATEKWGR
Sbjct: 121 SGDMEEIFFDFRKQRFIYSKELGAFSKLPYPTKETFGHYLKCTGHGTEAKIATATEKWGR 180
Query: 181 NVFEYPQPTFQKLMKENCMEPFFVFQVFCVGLWCLDEYWYYSLFTLFMLFMFESTMAKSR 240
NVF+YPQPTFQKLMKENCMEPFFVFQVFCVGLWCLDE+WYYS+FTLFMLFMFESTMAKSR
Sbjct: 181 NVFDYPQPTFQKLMKENCMEPFFVFQVFCVGLWCLDEFWYYSVFTLFMLFMFESTMAKSR 240
Query: 241 LKTLTEIRRVRVDNQTIMVHRCGKWVKLAGTDLVPGDVVSIGRSSGQTG-EDKSVPADML 299
LKTLT++R VRVD+QT+MV+R GKWVKL GTDL+PGDVVSIGR S QTG EDK+VPADML
Sbjct: 241 LKTLTDLRSVRVDSQTVMVYRSGKWVKLLGTDLLPGDVVSIGRPSTQTGGEDKTVPADML 300
Query: 300 ILGGSAIVNEAILTGESTPQWKVSIMGRETGEKLSARRDKSHVLFGGTKILQHTPDKTFP 359
+L GSAIVNEAILTGESTPQWKV I+G+ + EKLS +R+K+HVLFGGTKILQH+PDK+F
Sbjct: 301 LLVGSAIVNEAILTGESTPQWKVPIVGQRSDEKLSIKRNKNHVLFGGTKILQHSPDKSFS 360
Query: 360 LKTPDGGCLAVVLRTGFETSQGKLMRTILFSTERVTANSWESGLFILFLVVFAVIAAGYV 419
LKTPDGGCLAVVLRTGFETSQGKLMRTILFSTERVTANSWESGLFILFLVVFAVIAAGYV
Sbjct: 361 LKTPDGGCLAVVLRTGFETSQGKLMRTILFSTERVTANSWESGLFILFLVVFAVIAAGYV 420
Query: 420 LKKGMEDPTRSKYKLFLSCSLIITSVIPPELPMELSIAVNTSLIALARRGIFCTEPFRIP 479
L KG+EDPTRSKYKL L CSLIITSVIPPELPMELSIAVNTSL+AL RRGIFCTEPFRIP
Sbjct: 421 LVKGLEDPTRSKYKLLLGCSLIITSVIPPELPMELSIAVNTSLLALVRRGIFCTEPFRIP 480
Query: 480 FAGKVDMCCFDKTGTLTSDDMEFRGVVGLSNAE-LEDDMTKVPVRTQEILASCHALVFVD 538
FAGKVD+CCFDKTGTLTSDDMEFRGV GLSN E E DM+KVPVRT EILASCHALVFV+
Sbjct: 481 FAGKVDLCCFDKTGTLTSDDMEFRGVGGLSNCEEAETDMSKVPVRTLEILASCHALVFVE 540
Query: 539 NKLVGDPLEKAALKGIDWSYKSDEKAMPKRGGGNAVQIVQRHHFASHLKRMSVVVRVQEE 598
NKLVGDPLEKAALKGIDWSYK+DEKA+P+RG GN+VQI+QR+HFASHLKRMSV+VR+QEE
Sbjct: 541 NKLVGDPLEKAALKGIDWSYKADEKALPRRGNGNSVQIMQRYHFASHLKRMSVIVRIQEE 600
Query: 599 FFAFVKGAPETIQDRLTDLPSSYIETYKKYTHQGSRVLALAFKSLPDMTVSDARSLHRDE 658
+ AFVKGAPETIQ+RL D+P+ YIETYK+YT QGSRVLALA+K LPDM VS+AR + RD
Sbjct: 601 YLAFVKGAPETIQERLVDVPAQYIETYKRYTRQGSRVLALAYKRLPDMMVSEARDMDRDA 660
Query: 659 VENGLTFAGFAVFNCPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPV 718
VE+ LTFAGFAVFNCPIR DSA +L ELKNSS DL MITGDQALTAC+VA QVHIV+ PV
Sbjct: 661 VESDLTFAGFAVFNCPIRPDSAPVLLELKNSSHDLVMITGDQALTACHVAGQVHIVSNPV 720
Query: 719 LILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLTDAHDLCIGGDCFEMLQQTSAVLRVIP 778
LIL +G Y+WVSPDE E I YSEKE+E L + HDLCIGGD EMLQ TSAVLRVIP
Sbjct: 721 LILGRSGSGNEYKWVSPDEKEIIPYSEKEIETLAETHDLCIGGDSIEMLQATSAVLRVIP 780
Query: 779 YVKVFARVAPEQKELILTTFKAVGRMTLMCGDGTNDVGALKQAHVGVALLNAVPPTQSGN 838
+VKVFARVAP+QKELILTTFKAVGR TLMCGDGTNDVGALKQAHVGVALLN P +
Sbjct: 781 FVKVFARVAPQQKELILTTFKAVGRGTLMCGDGTNDVGALKQAHVGVALLNNKLPLSPSD 840
Query: 839 SSSEASKDENTKSVKSKKSKSASEAASKAMSLNSEGTSKGKASARLEANSRTAGNRHLTA 898
SS + + E ASK ++ N EG+SKGK + NRHLTA
Sbjct: 841 SSKDDKSKSKKSKL-------PLEPASKTITQNGEGSSKGKIPPQ---------NRHLTA 884
Query: 899 AEMQREKLKKMMEEL-NEEGDGRSAPIVKLGDASMASPFTAKHASVAPTTDIIRQGRSTL 957
AE+QR+KLKK+M++L N+EGDGRSAP+VKLGDASMASPFTAKHASVAP TDIIRQGRSTL
Sbjct: 885 AELQRQKLKKIMDDLNNDEGDGRSAPLVKLGDASMASPFTAKHASVAPVTDIIRQGRSTL 944
Query: 958 VTTLQMFKILGLNCLATAYVLSVMYLDGVKLGDVQATISGVFTAAFFLFISHARPLPTLS 1017
VTTLQMFKILGLNCLATAYVLSVMYLDGVKLGDVQATISGV TAAFFLFISHARPL TLS
Sbjct: 945 VTTLQMFKILGLNCLATAYVLSVMYLDGVKLGDVQATISGVLTAAFFLFISHARPLQTLS 1004
Query: 1018 AARPHPNIFCSYVFLSLMGQFAIHLFFLISSVKEAEKYMPDECIEPDADFHPNLVNTVSY 1077
A RPHP++F Y+FLSL+GQFA+HL FL+ SVKEAEK+MP+ECIEPDA FHPNLVNTVSY
Sbjct: 1005 AERPHPSVFSVYLFLSLIGQFAVHLTFLVYSVKEAEKHMPEECIEPDASFHPNLVNTVSY 1064
Query: 1078 MVNMMIQVATFAVNYMGHPFNQSISENKPFMYALMGAVGFFTVITSDLLRSLNDWLKLVP 1137
MV+MM+QVATFAVNYMGHPFNQSI ENKPF YAL+ GFFTVI SDL R LND LKLVP
Sbjct: 1065 MVSMMLQVATFAVNYMGHPFNQSIRENKPFFYALIAGAGFFTVIASDLFRDLNDSLKLVP 1124
Query: 1138 LPSGLRDKLLIWAGLMFLGCYSWERFLRWAFPGKVPAWRKRQRLAAANLEKK 1189
LP GLRDKLLIWA LMF+ CYSWER LRWAFPGK+ +W+ +QR ANLEKK
Sbjct: 1125 LPQGLRDKLLIWASLMFIICYSWERLLRWAFPGKISSWKHKQRAVTANLEKK 1176
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297812517|ref|XP_002874142.1| predicted protein [Arabidopsis lyrata subsp. lyrata] gi|297319979|gb|EFH50401.1| predicted protein [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
Score = 1911 bits (4950), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 938/1192 (78%), Positives = 1029/1192 (86%), Gaps = 19/1192 (1%)
Query: 1 MLSFHVGGKVVDRVDLLRKKHWVWRLDVWPFAILYSGWLIAIVPSIDFGDAAIVLGGLVA 60
M SF VGGKVV++VDL RKK VWRLDVWPFAILY+ WL IVPSIDF DA I LG L A
Sbjct: 1 MSSFRVGGKVVEKVDLCRKKQLVWRLDVWPFAILYTVWLTTIVPSIDFTDACIALGALSA 60
Query: 61 FHILVWLFTAWSVDFKCFAHYSKINDIHLADACKITPVKFCGSKEVVPLQFWKQSAVSST 120
FHILV LFTAWSVDFKCF +SK+N I ADACK+TP KF GSKEVVPL F Q S+
Sbjct: 61 FHILVLLFTAWSVDFKCFVQFSKVNSIDQADACKVTPAKFSGSKEVVPLHFRSQMTGSAA 120
Query: 121 PVDEDEICFDFRKQHFIYSREKGTFCKLPYPTKETFGYYLKCTGHSTEAKIAVATEKWGR 180
D +EI FDFRKQ FIYS+E G F KLPYPTKETFG+YLKCTGH TEAK+A ATEKWGR
Sbjct: 121 SEDLEEIFFDFRKQRFIYSKELGAFSKLPYPTKETFGHYLKCTGHGTEAKVATATEKWGR 180
Query: 181 NVFEYPQPTFQKLMKENCMEPFFVFQVFCVGLWCLDEYWYYSLFTLFMLFMFESTMAKSR 240
NVF+YPQPTFQKLMKENCMEPFFVFQVFCVGLWCLDE+WYYS+FTLFMLFMFESTMAKSR
Sbjct: 181 NVFDYPQPTFQKLMKENCMEPFFVFQVFCVGLWCLDEFWYYSVFTLFMLFMFESTMAKSR 240
Query: 241 LKTLTEIRRVRVDNQTIMVHRCGKWVKLAGTDLVPGDVVSIGRSSGQTG-EDKSVPADML 299
LKTLT++RRVRVD+QT+MV+R G+WV+L GTDL+PGDVVSIGR S TG EDK+VPADML
Sbjct: 241 LKTLTDLRRVRVDSQTVMVYRSGRWVRLLGTDLLPGDVVSIGRPSTHTGGEDKTVPADML 300
Query: 300 ILGGSAIVNEAILTGESTPQWKVSIMGRETGEKLSARRDKSHVLFGGTKILQHTPDKTFP 359
+L GSAIVNEAILTGESTPQWKV I+G+ + EKLS +RDK+HVLFGGTKILQH+PDK+F
Sbjct: 301 LLVGSAIVNEAILTGESTPQWKVPIVGQGSDEKLSIKRDKNHVLFGGTKILQHSPDKSFS 360
Query: 360 LKTPDGGCLAVVLRTGFETSQGKLMRTILFSTERVTANSWESGLFILFLVVFAVIAAGYV 419
LKTPDGGCLAVVLRTGFETSQGKLMRTILFSTERVTANSWESGLFILFLVVFAVIAAGYV
Sbjct: 361 LKTPDGGCLAVVLRTGFETSQGKLMRTILFSTERVTANSWESGLFILFLVVFAVIAAGYV 420
Query: 420 LKKGMEDPTRSKYKLFLSCSLIITSVIPPELPMELSIAVNTSLIALARRGIFCTEPFRIP 479
L KG+EDPTRSKYKL L CSLIITSVIPPELPMELSIAVNTSLIALARRGIFCTEPFRIP
Sbjct: 421 LVKGLEDPTRSKYKLLLGCSLIITSVIPPELPMELSIAVNTSLIALARRGIFCTEPFRIP 480
Query: 480 FAGKVDMCCFDKTGTLTSDDMEFRGVVGLSNAELED-DMTKVPVRTQEILASCHALVFVD 538
FAGKVD+CCFDKTGTLTSDDMEFRGV GLSN+E D DM+KVPVRT EILASCHALVFVD
Sbjct: 481 FAGKVDLCCFDKTGTLTSDDMEFRGVGGLSNSEEADTDMSKVPVRTLEILASCHALVFVD 540
Query: 539 NKLVGDPLEKAALKGIDWSYKSDEKAMPKRGGGNAVQIVQRHHFASHLKRMSVVVRVQEE 598
NKLVGDPLEKAALKGIDWSYK+DEKA+P+RG GN+VQI+QR+HFASHLKRMSV+VR+QEE
Sbjct: 541 NKLVGDPLEKAALKGIDWSYKADEKALPRRGNGNSVQIMQRYHFASHLKRMSVIVRIQEE 600
Query: 599 FFAFVKGAPETIQDRLTDLPSSYIETYKKYTHQGSRVLALAFKSLPDMTVSDARSLHRDE 658
+ FVKGAPETIQ+RL D+P+ YIETYK+YT QGSRVLALA+K LPDM VS+AR + RD
Sbjct: 601 YLVFVKGAPETIQERLVDVPAQYIETYKRYTRQGSRVLALAYKRLPDMMVSEARDMDRDA 660
Query: 659 VENGLTFAGFAVFNCPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPV 718
VE+ LTFAGFAVFNCPIR DSA +L ELKNSS DL MITGDQALTAC+VA QVHIV+ PV
Sbjct: 661 VESDLTFAGFAVFNCPIRPDSAPVLLELKNSSHDLVMITGDQALTACHVAGQVHIVSNPV 720
Query: 719 LILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLTDAHDLCIGGDCFEMLQQTSAVLRVIP 778
LIL Y+W+SPDE E I YSEK++E L + HDLCIGGD EMLQ TSAVLRVIP
Sbjct: 721 LILGRSGTDNEYKWMSPDEKEIIPYSEKDIETLAETHDLCIGGDSIEMLQATSAVLRVIP 780
Query: 779 YVKVFARVAPEQKELILTTFKAVGRMTLMCGDGTNDVGALKQAHVGVALLNAVPPTQSGN 838
+VKVFARVAP+QKELILTTFKAVGR TLMCGDGTNDVGALKQAHVGVALLN +PP+ +
Sbjct: 781 FVKVFARVAPQQKELILTTFKAVGRGTLMCGDGTNDVGALKQAHVGVALLNTIPPSSPSD 840
Query: 839 SSSEASKDENTKSVKSKKSKSASEAASKAMSLNSEGTSKGKASARLEANSRTAGNRHLTA 898
SS + + E ASK + N EG+SKGK + NRHLTA
Sbjct: 841 SSKDDKSKSKKSKL-------PLEPASKTIIQNGEGSSKGKIPPQ---------NRHLTA 884
Query: 899 AEMQREKLKKMMEELN-EEGDGRSAPIVKLGDASMASPFTAKHASVAPTTDIIRQGRSTL 957
AE+QR+KLKKMM+ELN +EGDGRSAP+VKLGDASMASPFTAKHASVAP TDIIRQGRSTL
Sbjct: 885 AELQRQKLKKMMDELNSDEGDGRSAPLVKLGDASMASPFTAKHASVAPVTDIIRQGRSTL 944
Query: 958 VTTLQMFKILGLNCLATAYVLSVMYLDGVKLGDVQATISGVFTAAFFLFISHARPLPTLS 1017
VTTLQMFKILGLNCLATAYVLSVMYLDGVKLGDVQATISGV TAAFFLFISHARPL TLS
Sbjct: 945 VTTLQMFKILGLNCLATAYVLSVMYLDGVKLGDVQATISGVLTAAFFLFISHARPLQTLS 1004
Query: 1018 AARPHPNIFCSYVFLSLMGQFAIHLFFLISSVKEAEKYMPDECIEPDADFHPNLVNTVSY 1077
A RPHP++F Y+FLSL+GQFA+HL FLI SVKEAEK+MP+ECIEPDA FHPNLVNTVSY
Sbjct: 1005 AERPHPSVFSLYLFLSLLGQFAVHLTFLIYSVKEAEKHMPEECIEPDASFHPNLVNTVSY 1064
Query: 1078 MVNMMIQVATFAVNYMGHPFNQSISENKPFMYALMGAVGFFTVITSDLLRSLNDWLKLVP 1137
MV+MM+QVATFAVNYMGHPFNQSI ENKPF YAL+ GFFTVI SDL R LND LKLVP
Sbjct: 1065 MVSMMLQVATFAVNYMGHPFNQSIRENKPFFYALIAGAGFFTVIASDLFRDLNDSLKLVP 1124
Query: 1138 LPSGLRDKLLIWAGLMFLGCYSWERFLRWAFPGKVPAWRKRQRLAAANLEKK 1189
LP GLRDKLL+WA LMF+ CYSWER LRWAFPGK+ +W+ +QR ANLEKK
Sbjct: 1125 LPQGLRDKLLLWASLMFIICYSWERLLRWAFPGKISSWKHKQRAVTANLEKK 1176
|
Source: Arabidopsis lyrata subsp. lyrata Species: Arabidopsis lyrata Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 1191 | ||||||
| TAIR|locus:2171686 | 1179 | PDR2 "phosphate deficiency res | 0.984 | 0.994 | 0.776 | 0.0 | |
| DICTYBASE|DDB_G0293004 | 1298 | ctaA "putative cation-transpor | 0.311 | 0.285 | 0.509 | 1.4e-245 | |
| UNIPROTKB|Q9HD20 | 1204 | ATP13A1 "Probable cation-trans | 0.685 | 0.677 | 0.455 | 8.3e-234 | |
| UNIPROTKB|F1S7C4 | 1204 | ATP13A1 "Uncharacterized prote | 0.685 | 0.677 | 0.455 | 1.1e-233 | |
| UNIPROTKB|F1PRS5 | 1206 | ATP13A1 "Uncharacterized prote | 0.685 | 0.676 | 0.453 | 4.5e-233 | |
| ZFIN|ZDB-GENE-040426-2804 | 1242 | atp13a "ATPase type 13A" [Dani | 0.695 | 0.666 | 0.442 | 5.8e-233 | |
| RGD|1306033 | 1197 | Atp13a1 "ATPase type 13A1" [Ra | 0.685 | 0.681 | 0.452 | 2e-232 | |
| MGI|MGI:2180801 | 1200 | Atp13a1 "ATPase type 13A1" [Mu | 0.685 | 0.68 | 0.452 | 6.6e-232 | |
| UNIPROTKB|F1MYA8 | 1199 | ATP13A1 "Uncharacterized prote | 0.685 | 0.680 | 0.450 | 9.7e-231 | |
| UNIPROTKB|H9L041 | 1192 | ATP13A1 "Uncharacterized prote | 0.672 | 0.671 | 0.442 | 2.6e-228 |
| TAIR|locus:2171686 PDR2 "phosphate deficiency response 2" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 4752 (1677.8 bits), Expect = 0., P = 0.
Identities = 926/1192 (77%), Positives = 1012/1192 (84%)
Query: 1 MLSFHVGGKVVDRVDLLRKKHWVWRLDVWPFAILYSGWLIAIVPSIDFGDAAIVLGGLVA 60
M SF VGGKVV++VDL RKK VWRLDVWPFAILY+ WL IVPSIDF DA I LGGL A
Sbjct: 1 MSSFRVGGKVVEKVDLCRKKQLVWRLDVWPFAILYTVWLTTIVPSIDFSDACIALGGLSA 60
Query: 61 FHILVWLFTAWSVDFKCFAHYSKINDIHLADACKITPVKFCGSKEVVPLQFWKQSAVSST 120
FHILV LFT WSVDFKCF +SK+N I ADACK+TP KF GSKEVVPL F Q S++
Sbjct: 61 FHILVLLFTTWSVDFKCFVQFSKVNSIDQADACKVTPAKFSGSKEVVPLHFRSQMTDSAS 120
Query: 121 PVDEDEICFDFRKQHFIYSREKGTFCKLPYPTKETFGYYLKCTGHSTEAKIAVATEKWGR 180
D +EI FDFRKQ FIYS+E G F KLPYPTKETFG+YLKCTGH TEAKIA ATEKWGR
Sbjct: 121 SGDMEEIFFDFRKQRFIYSKELGAFSKLPYPTKETFGHYLKCTGHGTEAKIATATEKWGR 180
Query: 181 NVFEYPQPTFQKLMKENCMEPFFVFQVFCVGLWCLDEYWYYSLFTLFMLFMFESTMAKSR 240
NVF+YPQPTFQKLMKENCMEPFFVFQVFCVGLWCLDE+WYYS+FTLFMLFMFESTMAKSR
Sbjct: 181 NVFDYPQPTFQKLMKENCMEPFFVFQVFCVGLWCLDEFWYYSVFTLFMLFMFESTMAKSR 240
Query: 241 LKTLTEIRRVRVDNQTIMVHRCGKWVKLAGTDLVPGDVVSIGRSSGQTG-EDKSVPADML 299
LKTLT++R VRVD+QT+MV+R GKWVKL GTDL+PGDVVSIGR S QTG EDK+VPADML
Sbjct: 241 LKTLTDLRSVRVDSQTVMVYRSGKWVKLLGTDLLPGDVVSIGRPSTQTGGEDKTVPADML 300
Query: 300 ILGGSAIVNEAILTGESTPQWKVSIMGRETGEKLSARRDKSHVLFGGTKILQHTPDKTFP 359
+L GSAIVNEAILTGESTPQWKV I+G+ + EKLS +R+K+HVLFGGTKILQH+PDK+F
Sbjct: 301 LLVGSAIVNEAILTGESTPQWKVPIVGQRSDEKLSIKRNKNHVLFGGTKILQHSPDKSFS 360
Query: 360 LKTPDGGCLAVVLRTGFETSQGKLMRTILFSTERVTANSWESGLFILFLVVFAVIAAGYV 419
LKTPDGGCLAVVLRTGFETSQGKLMRTILFSTERVTANSWESGLFILFLVVFAVIAAGYV
Sbjct: 361 LKTPDGGCLAVVLRTGFETSQGKLMRTILFSTERVTANSWESGLFILFLVVFAVIAAGYV 420
Query: 420 LKKGMEDPTRSKYKLFLSCSLIITSVIPPELPMELSIAVNTSLIALARRGIFCTEPFRIP 479
L KG+EDPTRSKYKL L CSLIITSVIPPELPMELSIAVNTSL+AL RRGIFCTEPFRIP
Sbjct: 421 LVKGLEDPTRSKYKLLLGCSLIITSVIPPELPMELSIAVNTSLLALVRRGIFCTEPFRIP 480
Query: 480 FAGKVDMCCFDKTGTLTSDDMEFRGVVGLSNAE-LEDDMTKVPVRTQEILASCHALVFVD 538
FAGKVD+CCFDKTGTLTSDDMEFRGV GLSN E E DM+KVPVRT EILASCHALVFV+
Sbjct: 481 FAGKVDLCCFDKTGTLTSDDMEFRGVGGLSNCEEAETDMSKVPVRTLEILASCHALVFVE 540
Query: 539 NKLVGDPLEKAALKGIDWSYKSDEKAMPKRGGGNAVQIVQRHHFASHLKRMSVVVRVQEE 598
NKLVGDPLEKAALKGIDWSYK+DEKA+P+RG GN+VQI+QR+HFASHLKRMSV+VR+QEE
Sbjct: 541 NKLVGDPLEKAALKGIDWSYKADEKALPRRGNGNSVQIMQRYHFASHLKRMSVIVRIQEE 600
Query: 599 FFAFVKGAPETIQDRLTDLPSSYIETYKKYTHQGSRVLALAFKSLPDMTVSDARSLHRDE 658
+ AFVKGAPETIQ+RL D+P+ YIETYK+YT QGSRVLALA+K LPDM VS+AR + RD
Sbjct: 601 YLAFVKGAPETIQERLVDVPAQYIETYKRYTRQGSRVLALAYKRLPDMMVSEARDMDRDA 660
Query: 659 VENGLTFAGFAVFNCPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPV 718
VE+ LTFAGFAVFNCPIR DSA +L ELKNSS DL MITGDQALTAC+VA QVHIV+ PV
Sbjct: 661 VESDLTFAGFAVFNCPIRPDSAPVLLELKNSSHDLVMITGDQALTACHVAGQVHIVSNPV 720
Query: 719 LILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLTDAHDLCIGGDCFEMLQQTSAVLRVIP 778
LIL +G Y+WVSPDE E I YSEKE+E L + HDLCIGGD EMLQ TSAVLRVIP
Sbjct: 721 LILGRSGSGNEYKWVSPDEKEIIPYSEKEIETLAETHDLCIGGDSIEMLQATSAVLRVIP 780
Query: 779 YVKVFARVAPEQKELILTTFKAVGRMTLMCGDGTNDVGALKQAHVGVALLNAVPPTQSGN 838
+VKVFARVAP+QKELILTTFKAVGR TLMCGDGTNDVGALKQAHVGVALLN P
Sbjct: 781 FVKVFARVAPQQKELILTTFKAVGRGTLMCGDGTNDVGALKQAHVGVALLNNKLPL---- 836
Query: 839 SSSEASKDENTXXXXXXXXXXXXXXXXXXMSLNSEGTSKGKASARLEANSRTAGNRHLTA 898
S S++SKD+ + ++ N EG+SKGK + NRHLTA
Sbjct: 837 SPSDSSKDDKSKSKKSKLPLEPASKT---ITQNGEGSSKGKIPPQ---------NRHLTA 884
Query: 899 AXXXXXXXXXXXXXXXXX-GDGRSAPIVKLGDASMASPFTAKHASVAPTTDIIRQGRSTL 957
A GDGRSAP+VKLGDASMASPFTAKHASVAP TDIIRQGRSTL
Sbjct: 885 AELQRQKLKKIMDDLNNDEGDGRSAPLVKLGDASMASPFTAKHASVAPVTDIIRQGRSTL 944
Query: 958 VTTLQMFKILGLNCLATAYVLSVMYLDGVKLGDVQATISGVFTAAFFLFISHARPLPTLS 1017
VTTLQMFKILGLNCLATAYVLSVMYLDGVKLGDVQATISGV TAAFFLFISHARPL TLS
Sbjct: 945 VTTLQMFKILGLNCLATAYVLSVMYLDGVKLGDVQATISGVLTAAFFLFISHARPLQTLS 1004
Query: 1018 AARPHPNIFCSYVFLSLMGQFAIHLFFLISSVKEAEKYMPDECIEPDADFHPNLVNTVSY 1077
A RPHP++F Y+FLSL+GQFA+HL FL+ SVKEAEK+MP+ECIEPDA FHPNLVNTVSY
Sbjct: 1005 AERPHPSVFSVYLFLSLIGQFAVHLTFLVYSVKEAEKHMPEECIEPDASFHPNLVNTVSY 1064
Query: 1078 MVNMMIQVATFAVNYMGHPFNQSISENKPFMYALMGAVGFFTVITSDLLRSLNDWLKLVP 1137
MV+MM+QVATFAVNYMGHPFNQSI ENKPF YAL+ GFFTVI SDL R LND LKLVP
Sbjct: 1065 MVSMMLQVATFAVNYMGHPFNQSIRENKPFFYALIAGAGFFTVIASDLFRDLNDSLKLVP 1124
Query: 1138 LPSGLRDKLLIWAGLMFLGCYSWERFLRWAFPGKVPAWRKRQRLAAANLEKK 1189
LP GLRDKLLIWA LMF+ CYSWER LRWAFPGK+ +W+ +QR ANLEKK
Sbjct: 1125 LPQGLRDKLLIWASLMFIICYSWERLLRWAFPGKISSWKHKQRAVTANLEKK 1176
|
|
| DICTYBASE|DDB_G0293004 ctaA "putative cation-transporting ATPase" [Dictyostelium discoideum (taxid:44689)] | Back alignment and assigned GO terms |
|---|
Score = 1009 (360.2 bits), Expect = 1.4e-245, Sum P(6) = 1.4e-245
Identities = 195/383 (50%), Positives = 270/383 (70%)
Query: 130 DFRKQHFIYSREKGTFCKL----PYPTKETFGYYLKCTGHSTEAKIAVATEKWGRNVFEY 185
+F+K+ +Y+ +K F K+ P ++E + + T+ +I +A K+G N F+
Sbjct: 209 EFQKRKLVYNPDKKQFEKIKFHIPLDSEELLN---QARSYETDEQIELAAMKYGLNRFDI 265
Query: 186 PQPTFQKLMKENCMEPFFVFQVFCVGLWCLDEYWYYSLFTLFMLFMFESTMAKSRLKTLT 245
P PTF L KE + PFFVFQVFCV LWCL+EY +Y LF+LFML +FE+T+ KSRL L
Sbjct: 266 PIPTFLALYKEQAIAPFFVFQVFCVLLWCLEEYVFYCLFSLFMLLVFEATVVKSRLSNLN 325
Query: 246 EIRRVRVDNQ-TIMVHRCGKWVKLAGTDLVPGDVVSIGRSSGQTGEDKSVPADMLILGGS 304
+R + I V+R +W ++ T+++PGD+VSIGR + + ++P DM++L G
Sbjct: 326 SLRNMSSKPTFPIYVYRLNQWKQINTTEILPGDIVSIGRGASEA--TSTLPCDMILLSGG 383
Query: 305 AIVNEAILTGESTPQWKVSIMGRETGEKLSARRDKSHVLFGGTKILQHTPDKTFPL--KT 362
+VNEA+LTGESTP K SI R++ + L + +K H+L+GGT I+QHTP + K
Sbjct: 384 CVVNEAMLTGESTPHHKESIKDRKSTKPLDLKNEKIHILYGGTTIVQHTPSEKLARVSKP 443
Query: 363 PDGGCLAVVLRTGFETSQGKLMRTILFSTERVTANSWESGLFILFLVVFAVIAAGYVLKK 422
PD GC+A +TGF T+QG+LMRTI FS+ERVTAN+ ES LFILFL+ FA+ A+ Y+ K
Sbjct: 444 PDRGCIAYAYKTGFNTNQGRLMRTIWFSSERVTANNKESFLFILFLLTFAIAASAYLFNK 503
Query: 423 GMEDPTRSKYKLFLSCSLIITSVIPPELPMELSIAVNTSLIALARRGIFCTEPFRIPFAG 482
G+ + RSKYKL L+C ++ITSV+PPELPMELS+AVN SLI+L + GI+CTEPFRIPFAG
Sbjct: 504 GIRENNRSKYKLLLNCIMVITSVVPPELPMELSLAVNNSLISLIKLGIYCTEPFRIPFAG 563
Query: 483 KVDMCCFDKTGTLTSDDMEFRGV 505
KVD+CCFDKTGTLT+DD+ +G+
Sbjct: 564 KVDVCCFDKTGTLTTDDLVLQGI 586
|
|
| UNIPROTKB|Q9HD20 ATP13A1 "Probable cation-transporting ATPase 13A1" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
Score = 1778 (630.9 bits), Expect = 8.3e-234, Sum P(2) = 8.3e-234
Identities = 388/851 (45%), Positives = 527/851 (61%)
Query: 7 GGKVVDRVDLLRKKHWVWRLDVWPFA-ILYSGWLIAIVPS--------IDFGDAAI-VLG 56
G ++V V R+ + RL V PFA +LY WL A + +AA+ VL
Sbjct: 46 GDELVAAVWPYRRLALLRRLTVLPFAGLLYPAWLGAAAAGCWGWGSSWVQIPEAALLVLA 105
Query: 57 GLVAFHILVWLFTAWSVDFKCFAHYSKINDIHLADACKITPVKFCGSKEVVPLQFWKQSA 116
+ H L L WSV C + D A K+ P GS E+V L +
Sbjct: 106 TICLAHALTVLSGHWSVHAHCALTCTPEYDPSKATFVKVVPTPNNGSTELVALH--RNEG 163
Query: 117 VSSTPVDEDEICFDFRKQHFIYSR-EKGTFCKLPYPTKETFGYYLKCTGHSTEAKIAVAT 175
V + F+F+K + Y EK F + +P F YY G +++I A
Sbjct: 164 EDGLEV----LSFEFQKIKYSYDALEKKQFLPVAFPVGNAFSYYQSNRGFQEDSEIRAAE 219
Query: 176 EKWGRNVFEYPQPTFQKLMKENCMEPFFVFQVFCVGLWCLDEYWYYSLFTLFMLFMFEST 235
+K+G N E P F +L KE PFFVFQVFCVGLWCLDEYWYYS+FTL ML FE++
Sbjct: 220 KKFGSNKAEMVVPDFSELFKERATAPFFVFQVFCVGLWCLDEYWYYSVFTLSMLVAFEAS 279
Query: 236 MAKSRLKTLTEIRRVRVDNQTIMVHRCGKWVKLAGTDLVPGDVVSIGRSSGQTGEDKSVP 295
+ + +++ ++EIR++ I V+R KW +A ++VPGD+VSIGRS ++ VP
Sbjct: 280 LVQQQMRNMSEIRKMGNKPHMIQVYRSRKWRPIASDEIVPGDIVSIGRSP----QENLVP 335
Query: 296 ADMLILGGSAIVNEAILTGESTPQWKVSIMGRETGEKLSARRD-KSHVLFGGTKILQHTP 354
D+L+L G IV+EA+LTGES PQ K I L + D + HV+FGGTK++QH P
Sbjct: 336 CDVLLLRGRCIVDEAMLTGESVPQMKEPIEDLSPDRVLDLQADSRLHVIFGGTKVVQHIP 395
Query: 355 DK--TFPLKTPDGGCLAVVLRTGFETSQGKLMRTILFSTERVTANSWESGLFILFLVVFA 412
+ T LK D GC+A VLRTGF TSQGKL+RTILF +RVTAN+ E+ +FILFL+VFA
Sbjct: 396 PQKATTGLKPVDSGCVAYVLRTGFNTSQGKLLRTILFGVKRVTANNLETFIFILFLLVFA 455
Query: 413 VIAAGYVLKKGMEDPTRSKYKLFLSCSLIITSVIPPELPMELSIAVNTSLIALARRGIFC 472
+ AA YV +G +DP+R++YKLFL C+LI+TSV+PPELP+ELS+AVNTSLIALA+ ++C
Sbjct: 456 IAAAAYVWIEGTKDPSRNRYKLFLECTLILTSVVPPELPIELSLAVNTSLIALAKLYMYC 515
Query: 473 TEPFRIPFAGKVDMCCFDKTGTLTSDDMEFRGVVGLSNAELEDDMTKVPVRTQEILASCH 532
TEPFRIPFAGKV++CCFDKTGTLTSD + RGV GL + + ++ +PV T LASCH
Sbjct: 516 TEPFRIPFAGKVEVCCFDKTGTLTSDSLVVRGVAGLRDGKEVTPVSSIPVETHRALASCH 575
Query: 533 ALVFVDN-KLVGDPLEKAALKGIDWSYKSDEKAMPKRGGGNAVQIVQRHHFASHLKRMSV 591
+L+ +D+ LVGDPLEKA L +DW+ DEK P+ ++I QR HFAS LKRMSV
Sbjct: 576 SLMQLDDGTLVGDPLEKAMLTAVDWTLTKDEKVFPRSIKTQGLKIHQRFHFASALKRMSV 635
Query: 592 VVRVQEE------FFAFVKGAPETIQDRLTDLPSSYIETYKKYTHQGSRVLALAFKSLPD 645
+ ++ + A VKGAPET+ + P Y + + + +G+RVLAL +K L
Sbjct: 636 LASYEKLGSTDLCYIAAVKGAPETLHSMFSQCPPDYHHIHTEISREGARVLALGYKELGH 695
Query: 646 MTVSDARSLHRDEVENGLTFAGFAVFNCPIREDSAKILSELKNSSQDLAMITGDQALTAC 705
+T AR + R+ +E L F GF V +CP++ DS ++ E++N+S + MITGD LTAC
Sbjct: 696 LTHQQAREVKREALECSLKFVGFIVVSCPLKADSKAVIREIQNASHRVVMITGDNPLTAC 755
Query: 706 YVASQVHIVTKP-VLILCPV-KNGKVYEWVSPDETEKIQYSEKEVEGLTDAHDLCIGGDC 763
+VA ++H + K LIL P + G+ EW S D + + + + L + LC+ GD
Sbjct: 756 HVAQELHFIEKAHTLILQPPSEKGRQCEWRSIDGSIVLPLARGSPKALALEYALCLTGDG 815
Query: 764 FEMLQQTSA--VLRVIPYVKVFARVAPEQKELILTTFKAVGRMTLMCGDGTNDVGALKQA 821
LQ T +LR+IP+V+VFARVAP+QKE ++T+ K +G +TLMCGDGTNDVGALK A
Sbjct: 816 LAHLQATDPQQLLRLIPHVQVFARVAPKQKEFVITSLKELGYVTLMCGDGTNDVGALKHA 875
Query: 822 HVGVALLNAVP 832
VGVALL P
Sbjct: 876 DVGVALLANAP 886
|
|
| UNIPROTKB|F1S7C4 ATP13A1 "Uncharacterized protein" [Sus scrofa (taxid:9823)] | Back alignment and assigned GO terms |
|---|
Score = 1778 (630.9 bits), Expect = 1.1e-233, Sum P(2) = 1.1e-233
Identities = 388/851 (45%), Positives = 524/851 (61%)
Query: 7 GGKVVDRVDLLRKKHWVWRLDVWPFA-ILYSGWLIAIVPSI-DFGD--------AAIVLG 56
G ++V V R+ + RL V PFA +LY WL A +G A +VL
Sbjct: 46 GDELVAAVWPYRRLALLRRLTVLPFAGLLYPAWLGAAAAGCWGWGSSWAQIPEAALLVLA 105
Query: 57 GLVAFHILVWLFTAWSVDFKCFAHYSKINDIHLADACKITPVKFCGSKEVVPLQFWKQSA 116
+ H L L WSV C + D A K+ P GS E+V L +
Sbjct: 106 TICLAHALTVLSGHWSVHAHCALTCTPEYDPSKATFVKVVPTPNNGSTELVALH--RDEG 163
Query: 117 VSSTPVDEDEICFDFRKQHFIYSR-EKGTFCKLPYPTKETFGYYLKCTGHSTEAKIAVAT 175
V + F+F+K + Y EK F + +P F YY G +++I A
Sbjct: 164 EDGQEV----LSFEFQKIKYSYDALEKKRFLPVAFPVGNAFSYYQSNRGFQEDSEIRAAE 219
Query: 176 EKWGRNVFEYPQPTFQKLMKENCMEPFFVFQVFCVGLWCLDEYWYYSLFTLFMLFMFEST 235
+K+G N E P F +L KE PFFVFQVFCVGLWCLDEYWYYS+FTL ML FE++
Sbjct: 220 KKFGSNKAEMVVPDFSELFKERATAPFFVFQVFCVGLWCLDEYWYYSVFTLSMLVAFEAS 279
Query: 236 MAKSRLKTLTEIRRVRVDNQTIMVHRCGKWVKLAGTDLVPGDVVSIGRSSGQTGEDKSVP 295
+ + +++ ++EIR++ I V+R KW +A ++VPGD+VSIGRS ++ VP
Sbjct: 280 LVQQQMRNMSEIRKMGNKPHMIQVYRSRKWRPIASDEVVPGDIVSIGRSP----QENLVP 335
Query: 296 ADMLILGGSAIVNEAILTGESTPQWKVSIMGRETGEKLSARRD-KSHVLFGGTKILQHTP 354
D+L+L G IV+EA+LTGES PQ K I L + D + HV+FGGTK++QH P
Sbjct: 336 CDVLLLRGRCIVDEAMLTGESVPQMKEPIEDLSPNRVLDLQADSRLHVIFGGTKVVQHIP 395
Query: 355 DK--TFPLKTPDGGCLAVVLRTGFETSQGKLMRTILFSTERVTANSWESGLFILFLVVFA 412
+ T LK D GC+A VLRTGF TSQGKL+RTILF +RVTAN+ E+ +FILFL+VFA
Sbjct: 396 PQKATTGLKPVDNGCVAFVLRTGFNTSQGKLLRTILFGVKRVTANNLETFIFILFLLVFA 455
Query: 413 VIAAGYVLKKGMEDPTRSKYKLFLSCSLIITSVIPPELPMELSIAVNTSLIALARRGIFC 472
+ AA YV +G +DP+R++YKLFL C+LI+TSV+PPELP+ELS+AVNTSLIALA+ ++C
Sbjct: 456 IAAAAYVWIEGTKDPSRNRYKLFLECTLILTSVVPPELPIELSLAVNTSLIALAKLYMYC 515
Query: 473 TEPFRIPFAGKVDMCCFDKTGTLTSDDMEFRGVVGLSNAELEDDMTKVPVRTQEILASCH 532
TEPFRIPFAGKV++CCFDKTGTLTSD + RGV GL + + ++ +P+ T LASCH
Sbjct: 516 TEPFRIPFAGKVEVCCFDKTGTLTSDSLVVRGVAGLRDGKEVTPVSNIPIETHRALASCH 575
Query: 533 ALVFVDN-KLVGDPLEKAALKGIDWSYKSDEKAMPKRGGGNAVQIVQRHHFASHLKRMSV 591
+L+ +D+ LVGDPLEKA L +DW+ DEK P+ ++I QR HFAS LKRMSV
Sbjct: 576 SLMQLDDGTLVGDPLEKAMLTAVDWTLTKDEKVFPRSIKTQGLKIHQRFHFASALKRMSV 635
Query: 592 VVRVQEE------FFAFVKGAPETIQDRLTDLPSSYIETYKKYTHQGSRVLALAFKSLPD 645
+ ++ + A VKGAPET+ P Y + + + +G+RVLAL +K L
Sbjct: 636 LASYEKLGSTDLCYIAAVKGAPETLHSMFAQCPPDYHHIHTEISREGARVLALGYKELGH 695
Query: 646 MTVSDARSLHRDEVENGLTFAGFAVFNCPIREDSAKILSELKNSSQDLAMITGDQALTAC 705
+T AR + R+ +E L F GF V +CP++ DS ++ E++N+S + MITGD LTAC
Sbjct: 696 LTHQQAREVKREALECNLKFVGFIVVSCPLKADSKAVIREIQNASHRVVMITGDNPLTAC 755
Query: 706 YVASQVHIVTKP-VLILCP-VKNGKVYEWVSPDETEKIQYSEKEVEGLTDAHDLCIGGDC 763
+VA ++H + K LIL P + G+ EW S D + + + + L H LC+ GD
Sbjct: 756 HVAQELHFIEKAHTLILQPPTEKGQPCEWRSIDGSIILPLAPGSPKALALEHALCLTGDG 815
Query: 764 FEMLQ--QTSAVLRVIPYVKVFARVAPEQKELILTTFKAVGRMTLMCGDGTNDVGALKQA 821
LQ +LR+IPYV+VFARVAP+QKE ++T+ K +G +TLMCGDGTNDVGALK A
Sbjct: 816 LAHLQAEDPQLLLRLIPYVQVFARVAPKQKEFVITSLKELGYVTLMCGDGTNDVGALKHA 875
Query: 822 HVGVALLNAVP 832
VGVALL P
Sbjct: 876 DVGVALLANAP 886
|
|
| UNIPROTKB|F1PRS5 ATP13A1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
|---|
Score = 1780 (631.7 bits), Expect = 4.5e-233, Sum P(2) = 4.5e-233
Identities = 386/851 (45%), Positives = 525/851 (61%)
Query: 7 GGKVVDRVDLLRKKHWVWRLDVWPFA-ILYSGWLIAIVPS--------IDFGDAAI-VLG 56
G ++V V R+ + RL V PFA +LY W+ A + +AA+ VL
Sbjct: 48 GDELVAAVWPYRRLALLRRLTVLPFAGLLYPAWVGAAAAGCWGWGSSWVQIPEAALLVLA 107
Query: 57 GLVAFHILVWLFTAWSVDFKCFAHYSKINDIHLADACKITPVKFCGSKEVVPLQFWKQSA 116
+ H L L WSV C + D A K+ P GS E+V L +
Sbjct: 108 TICLAHALTVLSGHWSVHAHCALTCTPEYDPRKATFVKVVPTPNNGSTELVALH--RDEG 165
Query: 117 VSSTPVDEDEICFDFRKQHFIYSR-EKGTFCKLPYPTKETFGYYLKCTGHSTEAKIAVAT 175
V + F+F+K + Y EK F + +P + F YY G +++I A
Sbjct: 166 EDGQEV----LSFEFQKIKYSYDTLEKKRFLPVAFPVRNAFSYYQSNRGFQEDSEIRAAE 221
Query: 176 EKWGRNVFEYPQPTFQKLMKENCMEPFFVFQVFCVGLWCLDEYWYYSLFTLFMLFMFEST 235
+K+G N E P F +L KE PFFVFQVFCVGLWCLDEYWYYS+FTL ML FE++
Sbjct: 222 KKFGSNKAEMVVPDFSELFKERATAPFFVFQVFCVGLWCLDEYWYYSVFTLSMLVAFEAS 281
Query: 236 MAKSRLKTLTEIRRVRVDNQTIMVHRCGKWVKLAGTDLVPGDVVSIGRSSGQTGEDKSVP 295
+ + +++ ++EIR++ I V+R KW +A ++VPGD+VSIGRS ++ VP
Sbjct: 282 LVQQQMRNMSEIRKMGNKPHMIQVYRSRKWRPIASDEIVPGDIVSIGRSP----QENLVP 337
Query: 296 ADMLILGGSAIVNEAILTGESTPQWKVSIMGRETGEKLSARRD-KSHVLFGGTKILQHTP 354
D+L+L G IV+EA+LTGES PQ K I L + D + HV+FGGTK++QH P
Sbjct: 338 CDVLLLRGRCIVDEAMLTGESVPQMKEPIEDLNPDRVLDLQADSRLHVIFGGTKVVQHIP 397
Query: 355 DK--TFPLKTPDGGCLAVVLRTGFETSQGKLMRTILFSTERVTANSWESGLFILFLVVFA 412
+ T LK D GC+A VLRTGF TSQGKL+RTILF +RVTAN+ E+ +FILFL+VFA
Sbjct: 398 PQKATTGLKPVDNGCVAYVLRTGFNTSQGKLLRTILFGVKRVTANNLETFIFILFLLVFA 457
Query: 413 VIAAGYVLKKGMEDPTRSKYKLFLSCSLIITSVIPPELPMELSIAVNTSLIALARRGIFC 472
+ AA YV +G +DP+R++YKLFL C+LI+TSV+PPELP+ELS+AVNTSLIALA+ ++C
Sbjct: 458 IAAAAYVWIEGTKDPSRNRYKLFLECTLILTSVVPPELPIELSLAVNTSLIALAKLYMYC 517
Query: 473 TEPFRIPFAGKVDMCCFDKTGTLTSDDMEFRGVVGLSNAELEDDMTKVPVRTQEILASCH 532
TEPFRIPFAGKV++CCFDKTGTLTSD + RGV GL + + ++ +PV T LASCH
Sbjct: 518 TEPFRIPFAGKVEVCCFDKTGTLTSDSLVVRGVAGLRDGKEVTPVSNIPVETHRALASCH 577
Query: 533 ALVFVDN-KLVGDPLEKAALKGIDWSYKSDEKAMPKRGGGNAVQIVQRHHFASHLKRMSV 591
+L+ +D+ LVGDPLEKA L +DW+ DEK P+ ++I QR HFAS LKRMSV
Sbjct: 578 SLMQLDDGTLVGDPLEKAMLTAVDWTLTKDEKVFPRSIKTQGLKIHQRFHFASALKRMSV 637
Query: 592 VVRVQEE------FFAFVKGAPETIQDRLTDLPSSYIETYKKYTHQGSRVLALAFKSLPD 645
+ ++ + A VKGAPET+ P Y + + + +G+RVLAL +K L
Sbjct: 638 LASYEKLGSTDLCYIAAVKGAPETLHSMFAQCPPDYHHIHTEISREGARVLALGYKELGH 697
Query: 646 MTVSDARSLHRDEVENGLTFAGFAVFNCPIREDSAKILSELKNSSQDLAMITGDQALTAC 705
+T AR + R+ +E L F GF V +CP++ DS ++ E++N+S + MITGD LTAC
Sbjct: 698 LTHQQAREVKREALECNLKFVGFIVVSCPLKADSKSVIREIQNASHRVVMITGDNPLTAC 757
Query: 706 YVASQVHIVTKP-VLILCP-VKNGKVYEWVSPDETEKIQYSEKEVEGLTDAHDLCIGGDC 763
+VA ++H + K LIL P + G+ EW S D + + + + L H LC+ GD
Sbjct: 758 HVAQELHFIEKAQTLILQPPTEKGRPCEWRSIDGSVTLPLARGSPKSLALEHALCLTGDG 817
Query: 764 FEMLQ--QTSAVLRVIPYVKVFARVAPEQKELILTTFKAVGRMTLMCGDGTNDVGALKQA 821
LQ +L +IP+V+VFARVAP+QKE ++T+ K +G +TLMCGDGTNDVGALK A
Sbjct: 818 LAHLQAEDPQQLLHLIPHVQVFARVAPKQKEFVITSLKELGYVTLMCGDGTNDVGALKHA 877
Query: 822 HVGVALLNAVP 832
VGVALL P
Sbjct: 878 DVGVALLANAP 888
|
|
| ZFIN|ZDB-GENE-040426-2804 atp13a "ATPase type 13A" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
|---|
Score = 1782 (632.4 bits), Expect = 5.8e-233, Sum P(2) = 5.8e-233
Identities = 381/861 (44%), Positives = 542/861 (62%)
Query: 10 VVDRVDLLRKKHWVWRLDVWPFAILYSGWL---IAIVPSIDFGDAAIV-LGGLVAFHILV 65
+V V L ++ V V+PF ILY L + + ++ +A ++ L L H+L
Sbjct: 86 LVRAVSLHSRRPRVLHGTVFPFLILYPACLYTWFGVYGAAEYVEAGLLALAALGIAHVLT 145
Query: 66 WLFTAWSVDFKCFAHYSKINDIHLADACKITPVKFCGSKEVVPLQFWKQSAVSSTPVDED 125
L WSV C SK +D A K+ P GS E+VPL K D
Sbjct: 146 VLSGYWSVHAHCLLTCSKESDPAKATFAKVIPTPNNGSAELVPLLRDKDE-------DGA 198
Query: 126 EIC-FDFRKQHFIYS-REKGTFCKLPYPTKETFGYYLKCTGHSTEAKIAVATEKWGRNVF 183
EI F+F+K ++Y EK F + +P ++ G+ E ++ A +++G N
Sbjct: 199 EILSFEFQKICYVYDGEEKKQFLPVAFPISFPMSHFQNWRGYQEEVQLRAAEKRYGTNRA 258
Query: 184 EYPQPTFQKLMKENCMEPFFVFQVFCVGLWCLDEYWYYSLFTLFMLFMFESTMAKSRLKT 243
E P F +L KE PFFVFQVFCVGLWCLDEYWYYS+FTLFML FE+++ + +++
Sbjct: 259 EMVVPDFLELFKERATAPFFVFQVFCVGLWCLDEYWYYSVFTLFMLVAFEASLVQQQMRN 318
Query: 244 LTEIRRVRVDNQTIMVHRCGKWVKLAGTDLVPGDVVSIGRSSGQTGEDKSVPADMLILGG 303
++EIRR+ I V+R KW ++ +LVPGD+VS+GRS +D VP D+L+L G
Sbjct: 319 MSEIRRMGNKPYMIQVYRNRKWRPISSDELVPGDIVSVGRSP----QDNLVPCDVLLLRG 374
Query: 304 SAIVNEAILTGESTPQWKVSIMGRETGEKLSARRD-KSHVLFGGTKILQHTPD--KTFPL 360
IV+EA+LTGES PQ K I + L + D + H++ GGTK++QH+P + L
Sbjct: 375 RCIVDEAMLTGESVPQMKEPIEDLDPNRILDLQTDSRLHIISGGTKVVQHSPPLRASAGL 434
Query: 361 KTPDGGCLAVVLRTGFETSQGKLMRTILFSTERVTANSWESGLFILFLVVFAVIAAGYVL 420
K D GC+A VLRTGF TSQGKL+RTILF +RVTAN+ E+ +FILFL+VFA+ AA YV
Sbjct: 435 KPVDNGCVAYVLRTGFYTSQGKLLRTILFGVKRVTANNLETFIFILFLLVFAIAAAVYVW 494
Query: 421 KKGMEDPTRSKYKLFLSCSLIITSVIPPELPMELSIAVNTSLIALARRGIFCTEPFRIPF 480
+G +DP+R+KYKLFL C+LI+TSV+PPELP+ELS+AVNTSLIALA+ +FCTEPFRIPF
Sbjct: 495 VEGTKDPSRNKYKLFLECTLILTSVVPPELPIELSLAVNTSLIALAKLYVFCTEPFRIPF 554
Query: 481 AGKVDMCCFDKTGTLTSDDMEFRGVVGLSNAELEDDMTKVPVRTQEILASCHALVFVDN- 539
AGKV++CCFDKTGTLTSD + RGV GL + ++++PV T ++A+CH+LV +D+
Sbjct: 555 AGKVEICCFDKTGTLTSDSLVVRGVAGLREGKQVMPVSEIPVDTHRVVATCHSLVTLDDG 614
Query: 540 KLVGDPLEKAALKGIDWSYKSDEKAMPKRGGGNAVQIVQRHHFASHLKRMSVVVRVQEE- 598
+LVGDPLEKA L DW+ DEK + ++I QR HF S LKRMSV+ +
Sbjct: 615 QLVGDPLEKAMLTAADWTLTKDEKVFARSIKTPGLKIHQRFHFTSALKRMSVLASYERMG 674
Query: 599 -----FFAFVKGAPETIQDRLTDLPSSYIETYKKYTHQGSRVLALAFKSLPDMTVSDARS 653
+ + VKGAPET+++ ++ P+SY E +++ + +G+RVLAL +K + ++ R
Sbjct: 675 STELCYISTVKGAPETLRNMFSECPASYDEVHREMSREGARVLALGYKEMGHLSHQQVRE 734
Query: 654 LHRDEVENGLTFAGFAVFNCPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHI 713
+ R+++E L FAGF V +CP++ DS ++ E++ +S + MITGD LTAC+VA ++H
Sbjct: 735 VSREQLECDLRFAGFMVVSCPLKSDSKAVIREIQEASHHVVMITGDNPLTACHVARELHF 794
Query: 714 VTKP-VLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLTDAHDLCIGGDCFEMLQQTSA 772
+ K LIL + ++WVS D + + V L +DLC+ G+ L+
Sbjct: 795 IQKEHTLILQQSSSQAEWQWVSIDGSVSLPLPPSSVSELIQRYDLCVTGEGLARLKFDPQ 854
Query: 773 VLR-VIPYVKVFARVAPEQKELILTTFKAVGRMTLMCGDGTNDVGALKQAHVGVALL-NA 830
+L ++P+V+VFARV+P+QKE ++T+ K +G +TLMCGDGTNDVGALK AH+GVALL NA
Sbjct: 855 LLSALLPHVRVFARVSPKQKEFVITSLKGLGFVTLMCGDGTNDVGALKHAHIGVALLANA 914
Query: 831 ---VPPTQSGNSSSEASKDEN 848
+P + N E S E+
Sbjct: 915 PERMPEKKKRNKEKEYSSGES 935
|
|
| RGD|1306033 Atp13a1 "ATPase type 13A1" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
Score = 1769 (627.8 bits), Expect = 2.0e-232, Sum P(2) = 2.0e-232
Identities = 385/851 (45%), Positives = 524/851 (61%)
Query: 7 GGKVVDRVDLLRKKHWVWRLDVWPFA-ILYSGWLIAIVPSI-DFGD--------AAIVLG 56
G ++V V R+ + RL V PFA +LY WL A +G+ A + L
Sbjct: 40 GDELVAAVWPYRRLALLRRLTVLPFAGLLYPAWLGAAASGCWGWGNSWTQIPEAALLALA 99
Query: 57 GLVAFHILVWLFTAWSVDFKCFAHYSKINDIHLADACKITPVKFCGSKEVVPLQFWKQSA 116
+ H L L WSV C + +D + K+ P GS E+V L +
Sbjct: 100 TICLAHALTILSGHWSVHAHCALTCTPEHDPNKVTFVKVVPTPNNGSTELVALH--RDKG 157
Query: 117 VSSTPVDEDEICFDFRKQHFIYSR-EKGTFCKLPYPTKETFGYYLKCTGHSTEAKIAVAT 175
V + F+F+K + Y EK F + +P F YY G ++ I A
Sbjct: 158 EDGLEV----LSFEFQKIKYSYDALEKKQFLPVAFPVGNAFSYYQSNRGFQEDSDIRAAE 213
Query: 176 EKWGRNVFEYPQPTFQKLMKENCMEPFFVFQVFCVGLWCLDEYWYYSLFTLFMLFMFEST 235
+K+G N E P F +L KE PFFVFQVFCVGLWCLDEYWYYS+FTL ML FE++
Sbjct: 214 KKFGSNKAEMAVPDFSELFKERATAPFFVFQVFCVGLWCLDEYWYYSVFTLSMLVAFEAS 273
Query: 236 MAKSRLKTLTEIRRVRVDNQTIMVHRCGKWVKLAGTDLVPGDVVSIGRSSGQTGEDKSVP 295
+ + +++ ++EIR++ I V+R KW +A D+VPGD+VSIGRS ++ VP
Sbjct: 274 LVQQQMRNMSEIRKMGNKPHMIQVYRSRKWRPIASDDIVPGDIVSIGRSP----QENLVP 329
Query: 296 ADMLILGGSAIVNEAILTGESTPQWKVSIMGRETGEKLSARRD-KSHVLFGGTKILQHTP 354
D+L+L G IV+EA+LTGES PQ K I L + D + HV+FGGTK++QH P
Sbjct: 330 CDVLLLRGRCIVDEAMLTGESVPQMKEPIEDLSPDRVLDLQADARLHVIFGGTKVVQHIP 389
Query: 355 DK--TFPLKTPDGGCLAVVLRTGFETSQGKLMRTILFSTERVTANSWESGLFILFLVVFA 412
+ T LK D GC+A VLRTGF TSQGKL+RTILF +RVTAN+ E+ +FILFL+VFA
Sbjct: 390 PQKATSGLKPVDNGCVAFVLRTGFNTSQGKLLRTILFGVKRVTANNLETFIFILFLLVFA 449
Query: 413 VIAAGYVLKKGMEDPTRSKYKLFLSCSLIITSVIPPELPMELSIAVNTSLIALARRGIFC 472
+ AA YV +G +DP+R++YKLFL C+LI+TSV+PPELP+ELS+AVNTSLIALA+ ++C
Sbjct: 450 IAAAAYVWIEGTKDPSRNRYKLFLECTLILTSVVPPELPIELSLAVNTSLIALAKLYMYC 509
Query: 473 TEPFRIPFAGKVDMCCFDKTGTLTSDDMEFRGVVGLSNAELEDDMTKVPVRTQEILASCH 532
TEPFRIPFAGKV++CCFDKTGTLTSD + RGV GL + + ++ +P+ T LASCH
Sbjct: 510 TEPFRIPFAGKVEVCCFDKTGTLTSDSLVVRGVAGLRDGKEVTPVSSIPIETHRALASCH 569
Query: 533 ALVFVDN-KLVGDPLEKAALKGIDWSYKSDEKAMPKRGGGNAVQIVQRHHFASHLKRMSV 591
+L+ +D+ LVGDPLEKA L +DW+ DEK P+ ++I QR HFAS LKRMSV
Sbjct: 570 SLMQLDDGTLVGDPLEKAMLTAVDWTLTKDEKVFPRSIKTQGLKIHQRFHFASALKRMSV 629
Query: 592 VVRVQEE------FFAFVKGAPETIQDRLTDLPSSYIETYKKYTHQGSRVLALAFKSLPD 645
+ ++ + A VKGAPET+ + P Y + + + +G+RVLAL +K L
Sbjct: 630 LASYEKLGSTDLCYIAAVKGAPETLHSMFSQCPPDYHHIHTEISREGARVLALGYKELGH 689
Query: 646 MTVSDARSLHRDEVENGLTFAGFAVFNCPIREDSAKILSELKNSSQDLAMITGDQALTAC 705
+T AR + R+ +E L F GF V +CP++ DS ++ E++N+S + MITGD LTAC
Sbjct: 690 LTHQQAREVKREALECSLKFVGFIVVSCPLKADSKAVIREIQNASHRVVMITGDNPLTAC 749
Query: 706 YVASQVHIVTKP-VLILCPV-KNGKVYEWVSPDETEKIQYSEKEVEGLTDAHDLCIGGDC 763
+VA ++H + K LIL P + G+ EW S D + + + + L H LC+ GD
Sbjct: 750 HVAQELHFIDKAHTLILHPPSEKGQPCEWRSIDNSIVLPLTLGSPKALALEHALCLTGDG 809
Query: 764 FEMLQQTSA--VLRVIPYVKVFARVAPEQKELILTTFKAVGRMTLMCGDGTNDVGALKQA 821
LQ +L +IP+V+VFARVAP+QKE ++T+ K +G +TLMCGDGTNDVGALK A
Sbjct: 810 LAHLQAVDPQQLLHLIPHVQVFARVAPKQKEFVITSLKELGYVTLMCGDGTNDVGALKHA 869
Query: 822 HVGVALLNAVP 832
VGVALL P
Sbjct: 870 DVGVALLANAP 880
|
|
| MGI|MGI:2180801 Atp13a1 "ATPase type 13A1" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
|---|
Score = 1762 (625.3 bits), Expect = 6.6e-232, Sum P(2) = 6.6e-232
Identities = 385/851 (45%), Positives = 526/851 (61%)
Query: 7 GGKVVDRVDLLRKKHWVWRLDVWPFA-ILYSGWLIAIVPSI-DFG-------DAAIV-LG 56
G ++V V R+ + RL V PFA +LY WL A +G +AA++ L
Sbjct: 43 GDELVAAVWPYRRLALLRRLTVLPFAGLLYPAWLGAAASGCWGWGSSWTQIPEAALLALA 102
Query: 57 GLVAFHILVWLFTAWSVDFKCFAHYSKINDIHLADACKITPVKFCGSKEVVPLQFWKQSA 116
+ H L L WSV C + D + K+ P GS E+V L +
Sbjct: 103 TICLAHALTVLSGHWSVHAHCALTCTPEYDPNKVTFVKVVPTPNNGSTELVALH--RDKG 160
Query: 117 VSSTPVDEDEICFDFRKQHFIYSR-EKGTFCKLPYPTKETFGYYLKCTGHSTEAKIAVAT 175
V + F+F+K + Y EK F + +P F YY G +++I A
Sbjct: 161 EDGLEV----LSFEFQKIKYSYDALEKKQFLPVAFPVGNAFSYYQSNRGFQEDSEIRAAE 216
Query: 176 EKWGRNVFEYPQPTFQKLMKENCMEPFFVFQVFCVGLWCLDEYWYYSLFTLFMLFMFEST 235
+K+G N E P F +L KE PFFVFQVFCVGLWCLDEYWYYS+FTL ML FE++
Sbjct: 217 KKFGSNKAEMVVPDFSELFKERATAPFFVFQVFCVGLWCLDEYWYYSVFTLSMLVAFEAS 276
Query: 236 MAKSRLKTLTEIRRVRVDNQTIMVHRCGKWVKLAGTDLVPGDVVSIGRSSGQTGEDKSVP 295
+ + +++ ++EIR++ I V+R KW +A D+VPGD+VSIGRS ++ VP
Sbjct: 277 LVQQQMRNMSEIRKMGNKPHMIQVYRSRKWRPVASDDIVPGDIVSIGRSP----QENLVP 332
Query: 296 ADMLILGGSAIVNEAILTGESTPQWKVSIMGRETGEKLSARRD-KSHVLFGGTKILQHTP 354
D+L+L G IV+EA+LTGES PQ K I L + D + HV+FGGTK++QH P
Sbjct: 333 CDVLLLRGRCIVDEAMLTGESVPQMKEPIEDLSPDRVLDLQADARLHVIFGGTKVVQHIP 392
Query: 355 DK--TFPLKTPDGGCLAVVLRTGFETSQGKLMRTILFSTERVTANSWESGLFILFLVVFA 412
+ T LK D GC+A VLRTGF TSQG+L+RTILF +RVTAN+ E+ +FILFL+VFA
Sbjct: 393 PQKATSGLKPVDNGCVAFVLRTGFNTSQGRLLRTILFGVKRVTANNLETFIFILFLLVFA 452
Query: 413 VIAAGYVLKKGMEDPTRSKYKLFLSCSLIITSVIPPELPMELSIAVNTSLIALARRGIFC 472
+ AA YV +G +DP+R++YKLFL C+LI+TSV+PPELP+ELS+AVNTSLIALA+ ++C
Sbjct: 453 IAAAAYVWVEGTKDPSRNRYKLFLECTLILTSVVPPELPIELSLAVNTSLIALAKLYMYC 512
Query: 473 TEPFRIPFAGKVDMCCFDKTGTLTSDDMEFRGVVGLSNAELEDDMTKVPVRTQEILASCH 532
TEPFRIPFAGKV++CCFDKTGTLTSD + RGV GL + + ++ +P+ T LASCH
Sbjct: 513 TEPFRIPFAGKVEVCCFDKTGTLTSDSLVVRGVAGLRDGKEVTPVSSIPIETHRALASCH 572
Query: 533 ALVFVDN-KLVGDPLEKAALKGIDWSYKSDEKAMPKRGGGNAVQIVQRHHFASHLKRMSV 591
+L+ +D+ LVGDPLEKA L +DW+ DEK P+ ++I QR HFAS LKRMSV
Sbjct: 573 SLMQLDDGTLVGDPLEKAMLTAVDWTLTKDEKVFPRSIKTQGLKIHQRFHFASALKRMSV 632
Query: 592 VVRVQEE------FFAFVKGAPETIQDRLTDLPSSYIETYKKYTHQGSRVLALAFKSLPD 645
+ ++ + A VKGAPET+ + P Y + + + +G+RVLAL +K L
Sbjct: 633 LASYEKLGSTDLCYIAAVKGAPETLHSMFSQCPPDYHHIHTEISREGARVLALGYKELGH 692
Query: 646 MTVSDARSLHRDEVENGLTFAGFAVFNCPIREDSAKILSELKNSSQDLAMITGDQALTAC 705
+T AR + R+ +E L F GF V +CP++ DS ++ E++N+S + MITGD LTAC
Sbjct: 693 LTHQQAREIKREALECSLKFVGFIVVSCPLKADSKAVIREIQNASHRVVMITGDNPLTAC 752
Query: 706 YVASQVHIVTKP-VLILCPV-KNGKVYEWVSPDETEKIQYSEKEVEGLTDAHDLCIGGDC 763
+VA ++H + K LIL P + G+ EW S D + + + + L H LC+ GD
Sbjct: 753 HVAQELHFIDKAHTLILHPPSEKGQPCEWRSIDSSIVLPLTLGSPKALALEHALCLTGDG 812
Query: 764 FEMLQQTSA--VLRVIPYVKVFARVAPEQKELILTTFKAVGRMTLMCGDGTNDVGALKQA 821
LQ +L +IP+V+VFARVAP+QKE ++T+ K +G +TLMCGDGTNDVGALK A
Sbjct: 813 LAHLQAVDPQQLLCLIPHVQVFARVAPKQKEFVITSLKELGYVTLMCGDGTNDVGALKHA 872
Query: 822 HVGVALLNAVP 832
VGVALL P
Sbjct: 873 DVGVALLANAP 883
|
|
| UNIPROTKB|F1MYA8 ATP13A1 "Uncharacterized protein" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
|---|
Score = 1761 (625.0 bits), Expect = 9.7e-231, Sum P(2) = 9.7e-231
Identities = 383/851 (45%), Positives = 521/851 (61%)
Query: 7 GGKVVDRVDLLRKKHWVWRLDVWPFA-ILYSGWLIAIVPSI-DFGD--------AAIVLG 56
G ++V V R+ + RL + PF +LY WL + +G A +VL
Sbjct: 41 GDELVAAVWPYRRLALLRRLTLLPFVGLLYPAWLGSAATGFWGWGSSWAQIPEAALLVLA 100
Query: 57 GLVAFHILVWLFTAWSVDFKCFAHYSKINDIHLADACKITPVKFCGSKEVVPLQFWKQSA 116
+ H L L WSV C + D A K+ P GS E+V L +
Sbjct: 101 TICLAHALTVLSGHWSVHAHCALTCTPEYDARKATFVKVVPTPNNGSTELVALH--RDEG 158
Query: 117 VSSTPVDEDEICFDFRKQHFIYSR-EKGTFCKLPYPTKETFGYYLKCTGHSTEAKIAVAT 175
V + F+F+K + Y EK F + +P F +Y G +++I A
Sbjct: 159 EDGQEV----LSFEFQKIKYSYDALEKKRFLPVAFPVGNAFSFYQSNRGFQEDSEIRAAE 214
Query: 176 EKWGRNVFEYPQPTFQKLMKENCMEPFFVFQVFCVGLWCLDEYWYYSLFTLFMLFMFEST 235
+K+G N E P F +L KE PFFVFQVFCVGLWCLDEYWYYS+FTL ML FE++
Sbjct: 215 KKFGSNKAEMVVPDFSELFKERATAPFFVFQVFCVGLWCLDEYWYYSVFTLSMLVAFEAS 274
Query: 236 MAKSRLKTLTEIRRVRVDNQTIMVHRCGKWVKLAGTDLVPGDVVSIGRSSGQTGEDKSVP 295
+ + +++ ++EIR++ I V+R KW +A ++VPGD+VSIGRS ++ VP
Sbjct: 275 LVQQQMRNMSEIRKMGNKPHMIQVYRSRKWRPIASDEIVPGDIVSIGRSP----QENLVP 330
Query: 296 ADMLILGGSAIVNEAILTGESTPQWKVSIMGRETGEKLSARRD-KSHVLFGGTKILQHTP 354
D+L+L G IV+EA+LTGES PQ K I L + D + HV+FGGTK++QH P
Sbjct: 331 CDVLLLRGRCIVDEAMLTGESVPQMKEPIEDLSPSRVLDLQADARLHVVFGGTKVVQHIP 390
Query: 355 DKTFP--LKTPDGGCLAVVLRTGFETSQGKLMRTILFSTERVTANSWESGLFILFLVVFA 412
+ LK D GC+A VLRTGF TSQGKL+RTILF +RVTAN+ E+ +FILFL+VFA
Sbjct: 391 PQKAAAGLKPVDNGCVAYVLRTGFNTSQGKLLRTILFGVKRVTANNLETFIFILFLLVFA 450
Query: 413 VIAAGYVLKKGMEDPTRSKYKLFLSCSLIITSVIPPELPMELSIAVNTSLIALARRGIFC 472
+ AA YV +G +DP+R++YKLFL C+LI+TSV+PPELP+ELS+AVNTSLIALA+ ++C
Sbjct: 451 IAAAAYVWIEGTKDPSRNRYKLFLECTLILTSVVPPELPIELSLAVNTSLIALAKLYMYC 510
Query: 473 TEPFRIPFAGKVDMCCFDKTGTLTSDDMEFRGVVGLSNAELEDDMTKVPVRTQEILASCH 532
TEPFRIPFAGKV++CCFDKTGTLTSD + RGV GL + + ++ +P+ T LASCH
Sbjct: 511 TEPFRIPFAGKVEVCCFDKTGTLTSDSLVVRGVAGLRDGKEVTPVSSIPIETHRALASCH 570
Query: 533 ALVFVDN-KLVGDPLEKAALKGIDWSYKSDEKAMPKRGGGNAVQIVQRHHFASHLKRMSV 591
+L+ +D+ LVGDPLEKA L +DW+ DEK P+ ++I QR HFAS LKRMSV
Sbjct: 571 SLMQLDDGTLVGDPLEKAMLTAVDWTLTRDEKVFPRSIKTQGLKIHQRFHFASALKRMSV 630
Query: 592 VVRVQEE------FFAFVKGAPETIQDRLTDLPSSYIETYKKYTHQGSRVLALAFKSLPD 645
+ ++ + A VKGAPET+ P Y + + + +G+RVLAL +K L
Sbjct: 631 LASYEKLGSTDLCYIAAVKGAPETLHSMFAQCPPDYHHIHTEISREGARVLALGYKELGH 690
Query: 646 MTVSDARSLHRDEVENGLTFAGFAVFNCPIREDSAKILSELKNSSQDLAMITGDQALTAC 705
+T AR + R+ +E L F GF V +CP++ DS ++ E++N+S + MITGD LTAC
Sbjct: 691 LTHQQAREVKREALECNLKFVGFIVVSCPLKADSKAVIREIQNASHRVVMITGDNPLTAC 750
Query: 706 YVASQVHIVTKP-VLILCP-VKNGKVYEWVSPDETEKIQYSEKEVEGLTDAHDLCIGGDC 763
+VA ++H + K LIL P G + EW S D + ++ + L H LC+ GD
Sbjct: 751 HVARELHFIEKAQTLILQPPTGKGGLCEWRSIDGSISEPLAQGSPKALAREHALCLTGDG 810
Query: 764 FEMLQ--QTSAVLRVIPYVKVFARVAPEQKELILTTFKAVGRMTLMCGDGTNDVGALKQA 821
LQ +LR+IPYV+VFARVAP+QKE ++T+ K +G +TLMCGDGTNDVGALK A
Sbjct: 811 LAHLQAEDPQLLLRLIPYVQVFARVAPKQKEFVITSLKELGYVTLMCGDGTNDVGALKHA 870
Query: 822 HVGVALLNAVP 832
VGVALL P
Sbjct: 871 DVGVALLANAP 881
|
|
| UNIPROTKB|H9L041 ATP13A1 "Uncharacterized protein" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
|---|
Score = 1739 (617.2 bits), Expect = 2.6e-228, Sum P(2) = 2.6e-228
Identities = 366/827 (44%), Positives = 514/827 (62%)
Query: 22 WVWRLDVWPFAILYSGWLIAIVPSIDFGDAAIV-LGGLVAFHILVWLFTAWSVDFKCFAH 80
W+W VW + A P +AA++ L + H+L L WSV C
Sbjct: 51 WLWGPRVWAAWRAAAEEEEAQGPGPAPPEAALLALAAIGVVHLLTALSGLWSVHAHCALT 110
Query: 81 YSKINDIHLADACKITPVKFCGSKEVVPLQFWKQSAVSSTPVDEDEICFDFRKQHFIYS- 139
+ A K+ P GS E+VPL + ++ + F+F+K + Y
Sbjct: 111 CVREPSPKKATLAKVVPTPNNGSAELVPLHRDQDED------GQEALSFEFQKIKYSYEI 164
Query: 140 REKGTFCKLPYPTKETFGYYLKCTGHSTEAKIAVATEKWGRNVFEYPQPTFQKLMKENCM 199
K F + +P + YY G+ + I A +K+G N E P F +L KE
Sbjct: 165 NGKKQFLPVAFPVEHPLCYYQNARGYQEDKDIRAAEKKYGTNKAEMVVPEFLELFKERAT 224
Query: 200 EPFFVFQVFCVGLWCLDEYWYYSLFTLFMLFMFESTMAKSRLKTLTEIRRVRVDNQTIMV 259
PFFVFQVFCVGLWCLDEYWYYS+FTL ML FE+++ + +++ ++EIR++ I V
Sbjct: 225 APFFVFQVFCVGLWCLDEYWYYSVFTLSMLVAFEASLVQQQMRNMSEIRKMGNKPYMIQV 284
Query: 260 HRCGKWVKLAGTDLVPGDVVSIGRSSGQTGEDKSVPADMLILGGSAIVNEAILTGESTPQ 319
+R KW ++ +++PGD+VSIGRS + VP D+L+L G IV+EA+LTGES PQ
Sbjct: 285 YRNRKWRPISSDEIIPGDIVSIGRSP----HENLVPCDVLLLRGRCIVDEAMLTGESVPQ 340
Query: 320 WKVSIMGRETGEKLSARRD-KSHVLFGGTKILQHTPDK--TFPLKTPDGGCLAVVLRTGF 376
K + L + D + H++FGGTK++QH P + + LK D GC+A LRTGF
Sbjct: 341 MKEPVEDLSPEHVLDMQTDARLHIIFGGTKVVQHIPPQKASTGLKPVDNGCVAYALRTGF 400
Query: 377 ETSQGKLMRTILFSTERVTANSWESGLFILFLVVFAVIAAGYVLKKGMEDPTRSKYKLFL 436
TSQGKL+RTILF +RVTAN+ E+ +FILFL+VFAV AA YV +G +DP+R++YKLFL
Sbjct: 401 NTSQGKLLRTILFGVKRVTANNLETFIFILFLLVFAVAAASYVWIEGTKDPSRNRYKLFL 460
Query: 437 SCSLIITSVIPPELPMELSIAVNTSLIALARRGIFCTEPFRIPFAGKVDMCCFDKTGTLT 496
C+LI+TSV+PPELP+ELS+AVNTSLIALA+ ++CTEPFRIPFAGKV++CCFDKTGTLT
Sbjct: 461 ECTLILTSVVPPELPIELSLAVNTSLIALAKLYVYCTEPFRIPFAGKVEVCCFDKTGTLT 520
Query: 497 SDDMEFRGVVGLSNAELEDDMTKVPVRTQEILASCHALVFVDN-KLVGDPLEKAALKGID 555
SD + RGV GL + + ++ +P+ T +A+CH+LV +D+ LVGDPLEKA L +D
Sbjct: 521 SDHLVVRGVAGLRDGKEVTPVSDIPIETHRAIATCHSLVQLDDGTLVGDPLEKAMLMAVD 580
Query: 556 WSYKSDEKAMPKRGGGNAVQIVQRHHFASHLKRMSVVVRVQEE------FFAFVKGAPET 609
W+ DEK P+ ++I QR HFAS LKRMSV+ ++ + A VKGAPET
Sbjct: 581 WTLTKDEKVFPRSIKTQGLKIHQRFHFASALKRMSVLASYEKIGAADLCYIAAVKGAPET 640
Query: 610 IQDRLTDLPSSYIETYKKYTHQGSRVLALAFKSLPDMTVSDARSLHRDEVENGLTFAGFA 669
+ L+ PS+Y + + +H+G+RVLAL +K L +T R + R+ +E L FAGF
Sbjct: 641 LHKMLSQCPSNYNAVHTEISHEGARVLALGYKELGHLTHQQVREMKREALECDLRFAGFI 700
Query: 670 VFNCPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKP-VLILCP-VKNG 727
V +CP++ DS ++ E++N+S + MITGD LTAC+VA ++H + + LIL P
Sbjct: 701 VVSCPLKTDSRSVIREIQNASHHVVMITGDNPLTACHVARELHFLQREHTLILQPPASKD 760
Query: 728 KVYEWVSPDETEKIQYSEKEVEGLTDAHDLCIGGDCFEMLQQTSA--VLRVIPYVKVFAR 785
++W S + + + LT +DLC+ G+ LQ + +LR+IP+++VFAR
Sbjct: 761 STWQWQSINGSIVFPILPSSLRELTQHYDLCVTGEGLSHLQALNRQQLLRLIPHIQVFAR 820
Query: 786 VAPEQKELILTTFKAVGRMTLMCGDGTNDVGALKQAHVGVALLNAVP 832
V P+QKE ++TT K++G +TLMCGDGTNDVGALK A VGVALL P
Sbjct: 821 VVPKQKEFVITTLKSLGYVTLMCGDGTNDVGALKHADVGVALLANAP 867
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries 
Original result of BLAST against SWISS-PROT
ID ![]() | Name ![]() | Annotated EC number ![]() | Identity ![]() | Query coverage ![]() | Hit coverage ![]() | RBH(Q2H) ![]() | RBH(H2Q) ![]() |
| Q9HD20 | AT131_HUMAN | 3, ., 6, ., 3, ., - | 0.4404 | 0.8723 | 0.8629 | yes | no |
| Q9EPE9 | AT131_MOUSE | 3, ., 6, ., 3, ., - | 0.4384 | 0.8748 | 0.8683 | yes | no |
| P90747 | YE56_CAEEL | 3, ., 6, ., 3, ., - | 0.4192 | 0.9429 | 0.9533 | yes | no |
| Q9LT02 | ATY1_ARATH | 3, ., 6, ., 3, ., - | 0.7869 | 0.9848 | 0.9949 | yes | no |
| O14072 | ATC4_SCHPO | 3, ., 6, ., 3, ., - | 0.4060 | 0.9513 | 0.9355 | yes | no |
| P39986 | ATC6_YEAST | 3, ., 6, ., 3, ., - | 0.4108 | 0.9487 | 0.9300 | yes | no |
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
| Your Input: | |||||||||||
| gw1.135.25.1 | p-type ATPase transporter (1185 aa) | ||||||||||
(Populus trichocarpa) | |||||||||||
Predicted Functional Partners: | |||||||||||
| PPO5 | polyphenol oxidase (582 aa) | • | 0.700 | ||||||||
| PPO2 | polyphenol oxidase (582 aa) | • | 0.688 | ||||||||
| PPO3 | polyphenol oxidase (590 aa) | • | 0.688 | ||||||||
| eugene3.37630002 | multicopper oxidase (228 aa) | • | 0.510 | ||||||||
| estExt_Genewise1_v1.C_LG_XIX2228 | multicopper oxidase (553 aa) | • | 0.510 | ||||||||
| estExt_Genewise1_v1.C_LG_VII3096 | multicopper oxidase (EC-1.10.3.3) (538 aa) | • | 0.510 | ||||||||
| estExt_Genewise1_v1.C_LG_II2639 | multicopper oxidase (548 aa) | • | 0.510 | ||||||||
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 1191 | |||
| TIGR01657 | 1054 | TIGR01657, P-ATPase-V, P-type ATPase of unknown pu | 0.0 | |
| TIGR01494 | 543 | TIGR01494, ATPase_P-type, ATPase, P-type (transpor | 1e-122 | |
| COG0474 | 917 | COG0474, MgtA, Cation transport ATPase [Inorganic | 1e-120 | |
| TIGR01657 | 1054 | TIGR01657, P-ATPase-V, P-type ATPase of unknown pu | 4e-77 | |
| TIGR01524 | 867 | TIGR01524, ATPase-IIIB_Mg, magnesium-translocating | 8e-34 | |
| TIGR01116 | 917 | TIGR01116, ATPase-IIA1_Ca, sarco/endoplasmic retic | 3e-31 | |
| TIGR01517 | 944 | TIGR01517, ATPase-IIB_Ca, plasma-membrane calcium- | 3e-27 | |
| TIGR01647 | 754 | TIGR01647, ATPase-IIIA_H, plasma-membrane proton-e | 5e-27 | |
| TIGR01522 | 884 | TIGR01522, ATPase-IIA2_Ca, golgi membrane calcium- | 3e-26 | |
| PRK10517 | 902 | PRK10517, PRK10517, magnesium-transporting ATPase | 3e-25 | |
| pfam00122 | 222 | pfam00122, E1-E2_ATPase, E1-E2 ATPase | 1e-24 | |
| TIGR01652 | 1057 | TIGR01652, ATPase-Plipid, phospholipid-translocati | 9e-21 | |
| TIGR01523 | 1053 | TIGR01523, ATPase-IID_K-Na, potassium and/or sodiu | 8e-19 | |
| TIGR01106 | 997 | TIGR01106, ATPase-IIC_X-K, sodium or proton efflux | 6e-13 | |
| COG2217 | 713 | COG2217, ZntA, Cation transport ATPase [Inorganic | 2e-12 | |
| PRK15122 | 903 | PRK15122, PRK15122, magnesium-transporting ATPase; | 1e-10 | |
| TIGR01525 | 556 | TIGR01525, ATPase-IB_hvy, heavy metal translocatin | 9e-10 | |
| PRK15122 | 903 | PRK15122, PRK15122, magnesium-transporting ATPase; | 1e-09 | |
| COG0474 | 917 | COG0474, MgtA, Cation transport ATPase [Inorganic | 2e-09 | |
| TIGR01512 | 536 | TIGR01512, ATPase-IB2_Cd, heavy metal-(Cd/Co/Hg/Pb | 3e-09 | |
| TIGR01511 | 572 | TIGR01511, ATPase-IB1_Cu, copper-(or silver)-trans | 6e-09 | |
| TIGR01525 | 556 | TIGR01525, ATPase-IB_hvy, heavy metal translocatin | 2e-07 | |
| COG2217 | 713 | COG2217, ZntA, Cation transport ATPase [Inorganic | 5e-07 | |
| TIGR01511 | 572 | TIGR01511, ATPase-IB1_Cu, copper-(or silver)-trans | 2e-06 | |
| COG2216 | 681 | COG2216, KdpB, High-affinity K+ transport system, | 9e-06 | |
| PRK01122 | 679 | PRK01122, PRK01122, potassium-transporting ATPase | 1e-05 | |
| COG2216 | 681 | COG2216, KdpB, High-affinity K+ transport system, | 2e-05 | |
| PRK01122 | 679 | PRK01122, PRK01122, potassium-transporting ATPase | 2e-05 | |
| pfam13246 | 91 | pfam13246, Hydrolase_like2, Putative hydrolase of | 2e-05 | |
| TIGR01497 | 675 | TIGR01497, kdpB, K+-transporting ATPase, B subunit | 3e-05 | |
| PLN03190 | 1178 | PLN03190, PLN03190, aminophospholipid translocase; | 4e-05 | |
| TIGR01512 | 536 | TIGR01512, ATPase-IB2_Cd, heavy metal-(Cd/Co/Hg/Pb | 3e-04 | |
| PRK10671 | 834 | PRK10671, copA, copper exporting ATPase; Provision | 4e-04 | |
| PRK11033 | 741 | PRK11033, zntA, zinc/cadmium/mercury/lead-transpor | 7e-04 | |
| COG4087 | 152 | COG4087, COG4087, Soluble P-type ATPase [General f | 0.001 | |
| PRK08868 | 144 | PRK08868, PRK08868, flagellar protein FlaG; Provis | 0.001 | |
| PRK10671 | 834 | PRK10671, copA, copper exporting ATPase; Provision | 0.004 |
| >gnl|CDD|233513 TIGR01657, P-ATPase-V, P-type ATPase of unknown pump specificity (type V) | Back alignment and domain information |
|---|
Score = 933 bits (2414), Expect = 0.0
Identities = 343/839 (40%), Positives = 460/839 (54%), Gaps = 58/839 (6%)
Query: 38 WLIAIVPSIDFGDAAIVLGGLVAFHILVWLFTAWSVDFKCFAHYSKINDIHLADACKITP 97
+ I I L L+ LV L W ++K Y +++ + P
Sbjct: 3 TIGISAYKISPFKLIIYLVTLILTFGLVLLLLTWLPEWKVKLRYVPVSNEDAETVVIVDP 62
Query: 98 VKFCGSKEVVPLQFWKQSAVSST--PV--DEDEICFDFRKQHFIY-SREKGTFCKLPYPT 152
GS +V L S T V E+ I FDFRKQ F Y +E F LPY
Sbjct: 63 TPNSGSDYIVELSNKSLSNDLQTENAVEGGEEPIYFDFRKQRFSYHEKELKIFSPLPYLF 122
Query: 153 KET-FGYYLKCTGHS---TEAKIAVATEKWGRNVFEYPQPTFQKLMKENCMEPFFVFQVF 208
KE FG Y C GHS T IA K+G+N E P P+F +L+KE + PF+VFQVF
Sbjct: 123 KEKSFGVYSTCAGHSNGLTTGDIAQRKAKYGKNEIEIPVPSFLELLKEEVLHPFYVFQVF 182
Query: 209 CVGLWCLDEYWYYSLFTLFMLFMFESTMAKSRLKTLTEIRRVRVDNQTIMVHRCGKWVKL 268
V LW LDEY+YYSL +FM S K + +R + Q+++V R GKWV +
Sbjct: 183 SVILWLLDEYYYYSLCIVFMSSTSISLSVYQIRKQMQRLRDMVHKPQSVIVIRNGKWVTI 242
Query: 269 AGTDLVPGDVVSIGRSSGQTGEDKSVPADMLILGGSAIVNEAILTGESTPQWKVSIMGRE 328
A +LVPGD+VSI R E+K++P D ++L GS IVNE++LTGES P K I
Sbjct: 243 ASDELVPGDIVSIPRP-----EEKTMPCDSVLLSGSCIVNESMLTGESVPVLKFPIPDNG 297
Query: 329 TGEKL--SARRDKSHVLFGGTKILQHTPDKTFPLKTPDGGCLAVVLRTGFETSQGKLMRT 386
++ K HVLFGGTKILQ P D GCLA+V+RTGF TS+G+L+R+
Sbjct: 298 DDDEDLFLYETSKKHVLFGGTKILQIRPYPG------DTGCLAIVVRTGFSTSKGQLVRS 351
Query: 387 ILFSTERVTANSWESGLFILFLVVFAVIAAGYVLKKGMEDPTRSKYKLFLSCSLIITSVI 446
IL+ RV +S FILFL V A+I Y + + ++D R K+ L IIT V+
Sbjct: 352 ILYPKPRVFKFYKDSFKFILFLAVLALIGFIYTIIELIKDG-RPLGKIILRSLDIITIVV 410
Query: 447 PPELPMELSIAVNTSLIALARRGIFCTEPFRIPFAGKVDMCCFDKTGTLTSDDMEFRGVV 506
PP LP ELSI +N SL L ++GIFCT PFRI FAGK+D+CCFDKTGTLT D ++ RGV
Sbjct: 411 PPALPAELSIGINNSLARLKKKGIFCTSPFRINFAGKIDVCCFDKTGTLTEDGLDLRGVQ 470
Query: 507 GLSNAE-----LEDDMTKVPVRTQEILASCHALVFVDNKLVGDPLEKAALKGIDWSY-KS 560
GLS + + +D + P T + LA+CH+L ++ KLVGDPL+K + W+ +
Sbjct: 471 GLSGNQEFLKIVTEDSSLKPSITHKALATCHSLTKLEGKLVGDPLDKKMFEATGWTLEED 530
Query: 561 DEKAMPKRG--------GGNAVQIVQRHHFASHLKRMSVVVRVQEEFF--AFVKGAPETI 610
DE A P + I++R F+S L+RMSV+V +E AFVKGAPETI
Sbjct: 531 DESAEPTSILAVVRTDDPPQELSIIRRFQFSSALQRMSVIVSTNDERSPDAFVKGAPETI 590
Query: 611 QDRL--TDLPSSYIETYKKYTHQGSRVLALAFKSLPDMTVSDARSLHRDEVENGLTFAGF 668
Q +PS Y E K YT +G RVLALA+K LP +T+ A+ L RD VE+ LTF GF
Sbjct: 591 QSLCSPETVPSDYQEVLKSYTREGYRVLALAYKELPKLTLQKAQDLSRDAVESNLTFLGF 650
Query: 669 AVFNCPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKP-VLIL---CPV 724
VF P++ D+ +++ ELK +S MITGD LTA +VA + IV LIL P
Sbjct: 651 IVFENPLKPDTKEVIKELKRASIRTVMITGDNPLTAVHVARECGIVNPSNTLILAEAEPP 710
Query: 725 KNGKV--YEWVSPDE------TEKIQYSEK---EVEGLTDAHDLCIGGDCFEMLQQTS-- 771
++GK ++ D +I Y + L + L + G F +LQ S
Sbjct: 711 ESGKPNQIKFEVIDSIPFASTQVEIPYPLGQDSVEDLLASRYHLAMSGKAFAVLQAHSPE 770
Query: 772 AVLRVIPYVKVFARVAPEQKELILTTFKAVGRMTLMCGDGTNDVGALKQAHVGVALLNA 830
+LR++ + VFAR+AP+QKE ++ + + MCGDG ND GALKQA VG++L A
Sbjct: 771 LLLRLLSHTTVFARMAPDQKETLVELLQKLDYTVGMCGDGANDCGALKQADVGISLSEA 829
|
These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in. Length = 1054 |
| >gnl|CDD|233438 TIGR01494, ATPase_P-type, ATPase, P-type (transporting), HAD superfamily, subfamily IC | Back alignment and domain information |
|---|
Score = 386 bits (994), Expect = e-122
Identities = 184/609 (30%), Positives = 261/609 (42%), Gaps = 137/609 (22%)
Query: 224 FTLFMLFMFESTMAKSRLKTLTEIRRVR---VDNQTIMVHRCGKWVKLAGTDLVPGDVVS 280
F LF++ +F + K +LK +R + V+ + V R W ++ DLVPGDVV
Sbjct: 1 FILFLVLVFVLLVVKQKLKAEDILRSLSDRLVNTRPATVLR-NGWKEIPAKDLVPGDVVL 59
Query: 281 IGRSSGQTGEDKSVPADMLILGGSAIVNEAILTGESTPQWKVSIMGRETGEKLSARRDKS 340
+ SG+T VPAD ++L GS V+E+ LTGES P K ++ ++G
Sbjct: 60 V--KSGET-----VPADGVLLSGSCFVDESNLTGESNPVLKTALKETQSGTITGDLVFAG 112
Query: 341 HVLFGGTKILQHTPDKTFPLKTPDGGCLAVVLRTGFETSQGKLMRTILFSTERVTANSWE 400
+FGGT I+ TP G +AVV++TGFET RT L S N
Sbjct: 113 TYVFGGTLIVVVTPTGILT----TVGRIAVVVKTGFET------RTPLQSKRDRLENF-- 160
Query: 401 SGLFILFLVVFAVIAAGYVLKKGMEDPTRSKYKLFLSCSLIITSVIPPELPMELSIAVNT 460
+FILFL++ A+ Y+ +G + S +K L +++ V+PP LP +++A+
Sbjct: 161 --IFILFLLLLALAVFLYLFIRGWDP--NSIFKALLRALIVLVIVVPPALPAAVTVALAV 216
Query: 461 SLIALARRGIFCTEPFRIPFAGKVDMCCFDKTGTLTSDDMEFRGVVGLSNAELEDDMTKV 520
LA++GI + GKVD C DKTGTLT + M +GV E
Sbjct: 217 GDARLAKKGILVRNLNALEELGKVDYLCSDKTGTLTKNKMTLQGVYIDGGKEDNSSS--- 273
Query: 521 PVRTQEILASCHALVFVDNKLVGDPLEKAALKGIDWSYKSDEKAMPKRGGGNAVQIVQRH 580
+ +N L GDP+EKA LK + K+D G +I+
Sbjct: 274 ------------LVACDNNYLSGDPMEKALLKSAELVGKAD-------KGNKEYKILDVF 314
Query: 581 HFASHLKRMSVVVRVQEE-FFAFVKGAPETIQDRLTDLPSSYIETYKKYTHQGSRVLALA 639
F+S LKRMSV+V + FVKGAPE I +R + Y E Y + QG RVLA A
Sbjct: 315 PFSSVLKRMSVIVETPDGSDLLFVKGAPEFILERCNN----YEEKYLELARQGLRVLAFA 370
Query: 640 FKSLPDMTVSDARSLHRDEVENGLTFAGFAVFNCPIREDSAKILSELKNSSQDLAMITGD 699
K L D L F G F P+R D+ + + ELK + + MITGD
Sbjct: 371 SKELED----------------DLEFLGLITFEDPLRPDAKETIEELKAAGIKVVMITGD 414
Query: 700 QALTACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLTDAHDLCI 759
LTA +A ++ I V+ VSP+
Sbjct: 415 NVLTAKAIAKELGI--------------DVFARVSPE----------------------- 437
Query: 760 GGDCFEMLQQTSAVLRVIPYVKVFARVAPEQKELILTTFKAVGRMTLMCGDGTNDVGALK 819
QK I+ + G + M GDG ND ALK
Sbjct: 438 ------------------------------QKLQIVEALQKKGHIVAMTGDGVNDAPALK 467
Query: 820 QAHVGVALL 828
+A VG+A+
Sbjct: 468 KADVGIAMG 476
|
The P-type ATPases are a large family of trans-membrane transporters acting on charged substances. The distinguishing feature of the family is the formation of a phosphorylated intermediate (aspartyl-phosphate) during the course of the reaction. Another common name for these enzymes is the E1-E2 ATPases based on the two isolable conformations: E1 (unphosphorylated) and E2 (phosphorylated). Generally, P-type ATPases consist of only a single subunit encompassing the ATPase and ion translocation pathway, however, in the case of the potassium (TIGR01497) and sodium/potassium (TIGR01106) varieties, these functions are split between two subunits. Additional small regulatory or stabilizing subunits may also exist in some forms. P-type ATPases are nearly ubiquitous in life and are found in numerous copies in higher organisms (at least 45 in Arabidopsis thaliana, for instance ). Phylogenetic analyses have revealed that the P-type ATPase subfamily is divided up into groups based on substrate specificities and this is represented in the various subfamily and equivalog models that have been made: IA (K+) TIGR01497, IB (heavy metals) TIGR01525, IIA1 (SERCA-type Ca++) TIGR01116, IIA2 (PMR1-type Ca++) TIGR01522, IIB (PMCA-type Ca++) TIGR01517, IIC (Na+/K+, H+/K+ antiporters) TIGR01106, IID (fungal-type Na+ and K+) TIGR01523, IIIA (H+) TIGR01647, IIIB (Mg++) TIGR01524, IV (phospholipid, flippase) TIGR01652 and V (unknown specificity) TIGR01657. The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily. Length = 543 |
| >gnl|CDD|223550 COG0474, MgtA, Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Score = 394 bits (1013), Expect = e-120
Identities = 171/685 (24%), Positives = 271/685 (39%), Gaps = 117/685 (17%)
Query: 188 PTFQKLMKENCMEPFFVFQVFCVGLWCLDEYWYYSLFTLFMLFM------FESTMAKSRL 241
F L+ + FV G L + + + + + A L
Sbjct: 80 DPFIILLLVAALLSAFVGDWVDAG-----VDAIVILLVVVINALLGFVQEYRAEKALEAL 134
Query: 242 KTLTEIRRVRVDNQTIMVHRCGKWVKLAGTDLVPGDVVSIGRSSGQTGEDKSVPADMLIL 301
K ++ + V R GK+V++ ++LVPGD+V + +G VPAD+ +L
Sbjct: 135 KKMS--------SPKAKVLRDGKFVEIPASELVPGDIVLL--EAGDV-----VPADLRLL 179
Query: 302 GGSA-IVNEAILTGESTPQWKVSIMGRETGEKLSARRDKSHVLFGGTKILQHTPDKTFPL 360
S V+E+ LTGES P K ++ T D+ ++LF GT ++
Sbjct: 180 ESSDLEVDESALTGESLPVEKQALP--LTKSDAPLGLDRDNMLFSGTTVVS--------- 228
Query: 361 KTPDGGCLAVVLRTGFETSQGKLMRTILFSTERVTANSWESGLFILFLVVFAVIAAGYVL 420
G +V+ TGFET GK+ R + E T + FL+V A++ V
Sbjct: 229 ----GRAKGIVVATGFETEFGKIARLLPTKKEVKTPLQRKLNKLGKFLLVLALVLGALVF 284
Query: 421 KKGMEDPTRSKYKLFLSCSLIITSVIPPELPMELSIAVNTSLIALARRGIFCTEPFRIPF 480
G+ + FL+ + + +P LP ++IA+ +A+ I
Sbjct: 285 VVGLFRGGNGLLESFLTALALAVAAVPEGLPAVVTIALALGAQRMAKDNAIVRSLNAIET 344
Query: 481 AGKVDMCCFDKTGTLTSDDMEFRGVVGLSNAELEDDMTKVPVRTQEI-----LASCH--A 533
G VD+ C DKTGTLT + M + + + + D + + A C+
Sbjct: 345 LGSVDVICSDKTGTLTQNKMTVKKIYINGGGK-DIDDKDLKDSPALLRFLLAAALCNSVT 403
Query: 534 LVFVDNKLVGDPLEKAALKGIDWS-YKSDEKAMPKRGGGNAVQIVQRHHFASHLKRMSVV 592
GDP E A ++ + + D + I+ F S KRMSV+
Sbjct: 404 PEKNGWYQAGDPTEGALVEFAEKLGFSLDLSGLEVEY-----PILAEIPFDSERKRMSVI 458
Query: 593 VRV-QEEFFAFVKGAPETIQDRLT----------DLPSSYIETYKKYTHQGSRVLALAFK 641
V+ + ++ FVKGAPE I +R + + E K+ +G RVLA+A+K
Sbjct: 459 VKTDEGKYILFVKGAPEVILERCKSIGELEPLTEEGLRTLEEAVKELASEGLRVLAVAYK 518
Query: 642 SLPDMTVSDARSLHRDEVENGLTFAGFAVFNCPIREDSAKILSELKNSSQDLAMITGDQA 701
L D DE+E+ L F G P RED + + EL+ + + MITGD
Sbjct: 519 KLDRAEKDD----EVDEIESDLVFLGLTGIEDPPREDVKEAIEELREAGIKVWMITGDHV 574
Query: 702 LTACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLTDAHDLCIGG 761
TA +A + I + L I G
Sbjct: 575 ETAIAIAKECGIEAE------------------------------------AESALVIDG 598
Query: 762 DCFEMLQQTSAVLRVIPYVKVFARVAPEQKELILTTFKAVGRMTLMCGDGTNDVGALKQA 821
+ L + ++ + VFARV+PEQK I+ + G + M GDG ND ALK A
Sbjct: 599 AELDALSD-EELAELVEELSVFARVSPEQKARIVEALQKSGHVVAMTGDGVNDAPALKAA 657
Query: 822 HVGVALLNAVPPTQSGNSSSEASKD 846
VG+A+ G ++A+K+
Sbjct: 658 DVGIAM---------GGEGTDAAKE 673
|
Length = 917 |
| >gnl|CDD|233513 TIGR01657, P-ATPase-V, P-type ATPase of unknown pump specificity (type V) | Back alignment and domain information |
|---|
Score = 276 bits (707), Expect = 4e-77
Identities = 86/226 (38%), Positives = 128/226 (56%), Gaps = 4/226 (1%)
Query: 928 GDASMASPFTAKHASVAPTTDIIRQGRSTLVTTLQMFKILGLNCLATAYVLSVMYLDGVK 987
+AS+A+PFT+K AS++ ++IR+GR LVT+ QMFK + L L Y +S++YL G
Sbjct: 829 AEASVAAPFTSKLASISCVPNVIREGRCALVTSFQMFKYMALYSLIQFYSVSILYLIGSN 888
Query: 988 LGDVQ-ATISGVFTAAFFLFISHARPLPTLSAARPHPNIFCSYVFLSLMGQFAIHLFFLI 1046
LGD Q TI + L +S +PL LS RP N+F Y+ S++ QF +H+ +
Sbjct: 889 LGDGQFLTIDLLLIFPVALLMSRNKPLKKLSKERPPSNLFSVYILTSVLIQFVLHILSQV 948
Query: 1047 SSVKEAEK---YMPDECIEPDADFHPNLVNTVSYMVNMMIQVATFAVNYMGHPFNQSISE 1103
V E Y P+ ++ + + PNL+NTV + V+ + T VN G PF + I +
Sbjct: 949 YLVFELHAQPWYKPENPVDLEKENFPNLLNTVLFFVSSFQYLITAIVNSKGPPFREPIYK 1008
Query: 1104 NKPFMYALMGAVGFFTVITSDLLRSLNDWLKLVPLPSGLRDKLLIW 1149
NKPF+Y L+ +G V+ D L L++VPLP R KLL+W
Sbjct: 1009 NKPFVYLLITGLGLLLVLLLDPHPLLGKILQIVPLPQEFRSKLLVW 1054
|
These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in. Length = 1054 |
| >gnl|CDD|130587 TIGR01524, ATPase-IIIB_Mg, magnesium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 140 bits (355), Expect = 8e-34
Identities = 158/703 (22%), Positives = 265/703 (37%), Gaps = 144/703 (20%)
Query: 167 TEAKIAVATEKWGRN--VFEYPQPTFQKLMKENCM-EPFFVFQVFCVGLWCLDEYWYYSL 223
T ++ ++G N V E P + L++ PF +G+ L + ++
Sbjct: 35 TNVEVTERLAEFGPNQTVEEKKVPNLRLLIR--AFNNPFIYILAMLMGVSYLTDDLEATV 92
Query: 224 FTLFMLFM---------FESTMAKSRLKTLTEIRR--VRVDNQTIMVHRCGKWVKLAGTD 272
M+ + A LK + + +RV N+ G ++
Sbjct: 93 IIALMVLASGLLGFIQESRAERAAYALKNMVKNTATVLRVINENGN----GSMDEVPIDA 148
Query: 273 LVPGDVVSIGRSSGQTGEDKSVPADMLILGGSAI-VNEAILTGESTPQWKVSIMGRETGE 331
LVPGD++ + ++G +PAD ++ + +N++ LTGES P K R
Sbjct: 149 LVPGDLIEL--AAGDI-----IPADARVISARDLFINQSALTGESLPVEKFVEDKRARDP 201
Query: 332 KLSARRDKSHVLFGGTKILQHTPDKTFPLKTPDGGCLAVVLRTGFETSQGKLMRTILFST 391
++ ++ ++ F GT +L G AVVL TG T G L T
Sbjct: 202 EI---LERENLCFMGTNVLS-------------GHAQAVVLATGSSTWFGSLAIAA---T 242
Query: 392 ERVTANSWESGL---------FILFLVVFAVIAAGYVLKKGMEDPTRSKYKLFLSCSLII 442
ER +++ G+ F+L +V ++ G + KG + FL +
Sbjct: 243 ERRGQTAFDKGVKSVSKLLIRFMLVMVPVVLMINGLM--KG------DWLEAFLFALAVA 294
Query: 443 TSVIPPELPMELSIAVNTSLIALARRGIFCTEPFRIPFAGKVDMCCFDKTGTLTSDDMEF 502
+ P LPM +S + I ++++ + E I G +D+ C DKTGTLT D
Sbjct: 295 VGLTPEMLPMIVSSNLAKGAINMSKKKVIVKELSAIQNFGAMDILCTDKTGTLTQD---- 350
Query: 503 RGVVGLSNAELEDDMTKVPVRTQEILASCHALVFVDNKLVGDPLEKAALKGIDWSYKSDE 562
ELE + ++ +L L + L+ A L +D E
Sbjct: 351 -------KIELEKHIDSSGETSERVL-KMAWLNSYFQTGWKNVLDHAVLAKLD------E 396
Query: 563 KAMPKRGGGNAVQIVQRHHFASHLKRMSVVVRVQEEFFAFV-KGAPETI---------QD 612
A + + V F +R+SVVV + E + KGA E +
Sbjct: 397 SAARQTASR--WKKVDEIPFDFDRRRLSVVVENRAEVTRLICKGAVEEMLTVCTHKRFGG 454
Query: 613 RLTDLPSSYIETYKK----YTHQGSRVLALAFKSLPDMTVSDARSLHRDEVENGLTFAGF 668
+ L S + QG RV+A+A K+L V +A DE + L GF
Sbjct: 455 AVVTLSESEKSELQDMTAEMNRQGIRVIAVATKTLK---VGEADFTKTDEEQ--LIIEGF 509
Query: 669 AVFNCPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLILCPVKNGK 728
F P +E + + ++ L + ++ ++TGD + + +V I
Sbjct: 510 LGFLDPPKESTKEAIAALFKNGINVKVLTGDNEIVTARICQEVGI--------------- 554
Query: 729 VYEWVSPDETEKIQYSEKEVEGLTDAHDLCIGGDCFEMLQQTSAVLRVIPYVKVFARVAP 788
DA+D +G D E+ + R + +FAR+ P
Sbjct: 555 ------------------------DANDFLLGADIEEL--SDEELARELRKYHIFARLTP 588
Query: 789 EQKELILTTFKAVGRMTLMCGDGTNDVGALKQAHVGVALLNAV 831
QK I+ K G GDG ND AL++A VG+++ A
Sbjct: 589 MQKSRIIGLLKKAGHTVGFLGDGINDAPALRKADVGISVDTAA 631
|
This model describes the magnesium translocating P-type ATPase found in a limited number of bacterial species and best described in Salmonella typhimurium, which contains two isoforms. These transporters are active in low external Mg2+ concentrations and pump the ion into the cytoplasm. The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis [Transport and binding proteins, Cations and iron carrying compounds]. Length = 867 |
| >gnl|CDD|233277 TIGR01116, ATPase-IIA1_Ca, sarco/endoplasmic reticulum calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 132 bits (333), Expect = 3e-31
Identities = 163/649 (25%), Positives = 256/649 (39%), Gaps = 148/649 (22%)
Query: 258 MVHRCGKWVKLAGTDLVPGDVVSIGRSSGQTGEDKSVPADMLILGGSAI-VNEAILTGES 316
V R G+W + DLVPGD+V + DK VPAD+ +L + V+++ILTGES
Sbjct: 76 KVLRDGRWSVIKAKDLVPGDIVELAVG------DK-VPADIRVLSLKTLRVDQSILTGES 128
Query: 317 TPQWKVSIMGRETGEKLSARRDKSHVLFGGTKILQHTPDKTFPLKTPDGGCLAVVLRTGF 376
K + ++ + +DK ++LF GT ++ G VV+RTG
Sbjct: 129 VSVNKHT---ESVPDERAVNQDKKNMLFSGTLVV-------------AGKARGVVVRTGM 172
Query: 377 ETSQGKLMRTILFSTERVTANSWE--------SGLFILFLVVFAVIAAGY----VLKKGM 424
T GK+ + + + T + S + L ++ VI G+ L G
Sbjct: 173 STEIGKIRDEMRAAEQEDTPLQKKLDEFGELLSKVIGLICILVWVINIGHFNDPALGGGW 232
Query: 425 EDPTRSKYKLFLSCSLIITSVIPPELPMELSIAVNTSLIAL-ARR-----GIFCTEPFRI 478
+K+ ++ ++ + IP LP AV T+ +AL R+ I P +
Sbjct: 233 IQGAIYYFKIAVALAV---AAIPEGLP-----AVITTCLALGTRKMAKKNAIVRKLP-SV 283
Query: 479 PFAGKVDMCCFDKTGTLTSDDMEFRGVVGLSNAELE------DDMT-----------KVP 521
G + C DKTGTLT++ M VV L + T
Sbjct: 284 ETLGCTTVICSDKTGTLTTNQMSVCKVVALDPSSSSLNEFCVTGTTYAPEGGVIKDDGPV 343
Query: 522 VRTQ----EILASCHAL-----VFVDNKL-----VGDPLEKAALKGI-------DWSYKS 560
Q E LA+ AL + + + VG+ E AALK +
Sbjct: 344 AGGQDAGLEELATIAALCNDSSLDFNERKGVYEKVGEATE-AALKVLVEKMGLPATKNGV 402
Query: 561 DEKAMPKRGGGNAVQIVQRH----HFASHLKRMSVVVRVQEEFFAFVKGAPETIQDR--- 613
K P G + + F+ K MSV+ + FVKGAPE + +R
Sbjct: 403 SSKRRPALGCNSVWNDKFKKLATLEFSRDRKSMSVLCKPSTGNKLFVKGAPEGVLERCTH 462
Query: 614 ----------LTDLPSSYIETYKKY--THQGSRVLALAFKSLPDMTVSD--ARSLHRDEV 659
LTD + I + K T + R LALAFK +PD D + + + +
Sbjct: 463 ILNGDGRAVPLTDKMKNTILSVIKEMGTTKALRCLALAFKDIPDPREEDLLSDPANFEAI 522
Query: 660 ENGLTFAGFAVFNCPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVL 719
E+ LTF G P R + A + + + + + MITGD TA + ++ I
Sbjct: 523 ESDLTFIGVVGMLDPPRPEVADAIEKCRTAGIRVIMITGDNKETAEAICRRIGIF----- 577
Query: 720 ILCPVKNGKVYEWVSPDE-TEKIQYSEKEVEGLTDAHDLCIGGDCFEMLQQTSAVLRVIP 778
SPDE ++ +E + + A +Q +A +
Sbjct: 578 --------------SPDEDVTFKSFTGREFDEMGPA-------------KQRAACRSAV- 609
Query: 779 YVKVFARVAPEQKELILTTFKAVGRMTLMCGDGTNDVGALKQAHVGVAL 827
+F+RV P K ++ + G + M GDG ND ALK+A +G+A+
Sbjct: 610 ---LFSRVEPSHKSELVELLQEQGEIVAMTGDGVNDAPALKKADIGIAM 655
|
This model describes the P-type ATPase responsible for translocating calcium ions across the endoplasmic reticulum membrane of eukaryotes , and is of particular importance in the sarcoplasmic reticulum of skeletal and cardiac muscle in vertebrates. These pumps transfer Ca2+ from the cytoplasm to the lumen of the endoplasmic reticulum. In humans and mice, at least, there are multiple isoforms of the SERCA pump with overlapping but not redundant functions. Defects in SERCA isoforms are associated with diseases in humans. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the latter of which is modelled by TIGR01522 [Transport and binding proteins, Cations and iron carrying compounds]. Length = 917 |
| >gnl|CDD|188151 TIGR01517, ATPase-IIB_Ca, plasma-membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 119 bits (300), Expect = 3e-27
Identities = 144/625 (23%), Positives = 222/625 (35%), Gaps = 145/625 (23%)
Query: 254 NQTIMVHRCGKWVKLAGTDLVPGDVVSIGRSSGQTGEDKSVPAD-MLILGGSAIVNEAIL 312
Q I V R G+ +++ D+V GD+VS+ TG+ VPAD + I G S ++E+ +
Sbjct: 166 AQKIAVIRGGQEQQISIHDIVVGDIVSL-----STGD--VVPADGVFISGLSLEIDESSI 218
Query: 313 TGESTPQWKVSIMGRETGEKLSARRDKSHVLFGGTKILQHTPDKTFPLKTPDGGCLAVVL 372
TGES P K + L GT + + G +V
Sbjct: 219 TGESDPIKK--------------GPVQDPFLLSGTVVNE-------------GSGRMLVT 251
Query: 373 RTGFETSQGKLMRTILFSTE----------RVTANSWESGL---FILFLVVFAVIAAGYV 419
G + GKLM + + E + + G+ +LFLV+ YV
Sbjct: 252 AVGVNSFGGKLMMELRQAGEDSTPLQEKLSELAGLIGKFGMGSAVLLFLVLSLR----YV 307
Query: 420 LKKGMEDPTRSKY------KLFLSCSLIITSVIPPELPMELSIAVNTSLI------ALAR 467
+ D ++ F+ I+ +P LP+ ++IA+ S+ L R
Sbjct: 308 FRIIRGDGRDTEEDAQTFLDHFIIAVTIVVVAVPEGLPLAVTIALAYSMKKMMKDNNLVR 367
Query: 468 RGIFCTEPFRIPFAGKVDMCCFDKTGTLTSDDMEF-RGVVGLSNAELEDDMTKVPVRTQE 526
C G C DKTGTLT + M +G +G + D + VP +
Sbjct: 368 HLAACET------MGSATAICSDKTGTLTQNVMSVVQGYIGEQRFNVRDVLRNVPKHVRN 421
Query: 527 ILASCHAL-----VFVDNK----LVGDPLEKAALKGIDWSYKSDEKAMPKRGGGNAVQIV 577
IL +L VD +G E A L D+ R V+I
Sbjct: 422 ILVEGISLNSSSEEVVDRGGKRAFIGSKTECALL---DFGLLLLRDYQEVRAEEKVVKIY 478
Query: 578 QRHHFASHLKRMSVVVRVQE-EFFAFVKGAPE--------------TIQDRLTDLPSSYI 622
F S K MSVVV+ ++ F KGA E D
Sbjct: 479 P---FNSERKFMSVVVKHSGGKYREFRKGASEIVLKPCRKRLDSNGEATPISDDDKDRCA 535
Query: 623 ETYKKYTHQGSRVLALAFKSLPDMTVSDARSLHRDEVENGLTFAGFAVFNCPIREDSAKI 682
+ + R + LA++ D GLT G P+R +
Sbjct: 536 DVIEPLASDALRTICLAYRDFAPEEFPRK-----DYPNKGLTLIGVVGIKDPLRPGVREA 590
Query: 683 LSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQ 742
+ E + + + M+TGD TA +A I+T
Sbjct: 591 VQECQRAGITVRMVTGDNIDTAKAIARNCGILT-------------------FGG----- 626
Query: 743 YSEKEVEGLTDAHDLCIGGDCFEMLQQTSAVLRVIPYVKVFARVAPEQKELILTTFKAVG 802
L + G F L + ++P ++V AR +P K+L++ K +G
Sbjct: 627 --------------LAMEGKEFRSLVY-EEMDPILPKLRVLARSSPLDKQLLVLMLKDMG 671
Query: 803 RMTLMCGDGTNDVGALKQAHVGVAL 827
+ + GDGTND ALK A VG ++
Sbjct: 672 EVVAVTGDGTNDAPALKLADVGFSM 696
|
This model describes the P-type ATPase responsible for translocating calcium ions across the plasma membrane of eukaryotes , out of the cell. In some organisms, this type of pump may also be found in vacuolar membranes. In humans and mice, at least, there are multiple isoforms of the PMCA pump with overlapping but not redundant functions. Accordingly, there are no human diseases linked to PMCA defects, although alterations of PMCA function do elicit physiological effects. The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1) which are modelled by TIGR01116 and TIGR01522. This model is well separated from those. Length = 944 |
| >gnl|CDD|233506 TIGR01647, ATPase-IIIA_H, plasma-membrane proton-efflux P-type ATPase | Back alignment and domain information |
|---|
Score = 118 bits (298), Expect = 5e-27
Identities = 135/580 (23%), Positives = 210/580 (36%), Gaps = 122/580 (21%)
Query: 259 VHRCGKWVKLAGTDLVPGDVVSIGRSSGQTGEDKSVPADMLILGGSAI-VNEAILTGEST 317
V R GKW ++ ++LVPGDVV + G VPAD + G I V++A LTGES
Sbjct: 96 VLRDGKWQEIPASELVPGDVVRLK--IGDI-----VPADCRLFEGDYIQVDQAALTGESL 148
Query: 318 PQWKVSIMGRETGEKLSARRDKSHVLFGGTKILQHTPDKTFPLKTPDGGCLAVVLRTGFE 377
P + + + G+ + Q G AVV TG
Sbjct: 149 P----------------VTKKTGDIAYSGSTVKQ-------------GEAEAVVTATGMN 179
Query: 378 TSQGKLMRTILFSTERVTANSWESGLFI-LFLVVFAVIAAGYVLKKGMEDPTRSKYKLFL 436
T GK + STE + + + I LFL+V + L ++ L
Sbjct: 180 TFFGKAAALVQ-STETGSGHLQKILSKIGLFLIVLIGVLVLIELVVLF-FGRGESFREGL 237
Query: 437 SCSLIITSV-IPPELPMELSIAVNTSLIALARRGIFCTEPFRIPFAGKVDMCCFDKTGTL 495
+L++ IP +P LS+ + LA++ T I +D+ C DKTGTL
Sbjct: 238 QFALVLLVGGIPIAMPAVLSVTMAVGAAELAKKKAIVTRLTAIEELAGMDILCSDKTGTL 297
Query: 496 TSDDMEFRGVVGLSNAELEDDMTKVPVRTQEILASCHALVFVDNKLVGDPLEKAALKGID 555
T + + ++ N +DD+ +L + A D D ++ A L
Sbjct: 298 TLNKLSIDEILPFFNGFDKDDV---------LLYAALASREEDQ----DAIDTAVLG--- 341
Query: 556 WSYKSDEKAMPKRGGGNAVQIVQRHHFASHLKRMSVVVRVQE--EFFAFVKGAPETIQDR 613
S K ++A + ++++ F KR V E + F KGAP+ I D
Sbjct: 342 -SAKDLKEAR------DGYKVLEFVPFDPVDKRTEATVEDPETGKRFKVTKGAPQVILDL 394
Query: 614 LTD---LPSSYIETYKKYTHQGSRVLALAFKSLPDMTVSDARSLHRDEVENGLTFAGFAV 670
+ + E + +G R L +A E F G
Sbjct: 395 CDNKKEIEEKVEEKVDELASRGYRALGVARTD----------------EEGRWHFLGLLP 438
Query: 671 FNCPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLILCPVKNGKVY 730
P R D+ + + ++ ++ M+TGD A A ++ + + V
Sbjct: 439 LFDPPRHDTKETIERARHLGVEVKMVTGDHLAIAKETARRLGL--GTNIYTADVLLKGDN 496
Query: 731 EWVSPDETEKIQYSEKEVEGLTDAHDLCIGGDCFEMLQQTSAVLRVIPYVKVFARVAPEQ 790
P ++ VE G FA V PE
Sbjct: 497 RDDLPSGLGEM------VED-------ADG----------------------FAEVFPEH 521
Query: 791 KELILTTFKAVGRMTLMCGDGTNDVGALKQAHVGVALLNA 830
K I+ + G + M GDG ND ALK+A VG+A+ A
Sbjct: 522 KYEIVEILQKRGHLVGMTGDGVNDAPALKKADVGIAVAGA 561
|
This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast. Length = 754 |
| >gnl|CDD|130585 TIGR01522, ATPase-IIA2_Ca, golgi membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 116 bits (292), Expect = 3e-26
Identities = 138/611 (22%), Positives = 225/611 (36%), Gaps = 135/611 (22%)
Query: 261 RCGKWVKLAGTDLVPGDVV--SIGRSSGQTGEDKSVPADMLILGGSAI-VNEAILTGEST 317
R GK + + LVPGD+V S+G D+ VPAD+ I+ + ++E+ LTGE+T
Sbjct: 123 REGKLEHVLASTLVPGDLVCLSVG--------DR-VPADLRIVEAVDLSIDESNLTGETT 173
Query: 318 PQWKVSIMGRETGEKLSARRDKSHVLFGGTKILQHTPDKTFPLKTPDGGCLAVVLRTGFE 377
P KV+ ++S++ F GT + G +V+ TG
Sbjct: 174 PVSKVT--APIPAATNGDLAERSNIAFMGTLV-------------RCGHGKGIVVGTGSN 218
Query: 378 TSQGKLMRTILFSTERVT--ANSWESGLFILFLVVFAVIAAGYVLKKGMEDPTRSKYKLF 435
T G + + + + T S + L LV F VI G + G + ++F
Sbjct: 219 TEFGAVFKMMQAIEKPKTPLQKSMDLLGKQLSLVSFGVI--GVICLVGWFQ-GKDWLEMF 275
Query: 436 -LSCSLIITSVIPPELPMELSIAVNTSLIALARRGIFCTEPFRIPFAGKVDMCCFDKTGT 494
+S SL + + IP LP+ +++ + ++ ++++ + + G V++ C DKTGT
Sbjct: 276 TISVSLAVAA-IPEGLPIIVTVTLALGVLRMSKKRAIVRKLPSVETLGSVNVICSDKTGT 334
Query: 495 LTSDDM-------------EFRGVVGLSNAELEDDMTKVPV-------RTQEILASCHAL 534
LT + M V E+ D + R E C+
Sbjct: 335 LTKNHMTVTKIWTSDGLHTMLNAVSLNQFGEVIVDGDVLHGFYTVAVSRILEAGNLCNNA 394
Query: 535 VFVDNK--LVGDPLEKAALKGIDWSYKSDEKAMPKRGGGNAVQIVQRHHFASHLKRMSVV 592
F + L+G+P + A ++ + + V F+S K M+V
Sbjct: 395 KFRNEADTLLGNPTDVALIE------LLMKFGLD--DLRETYIRVAEVPFSSERKWMAVK 446
Query: 593 V--RVQEEFFAFVKGAPETI-------------QDRLTD-LPSSYIETYKKYTHQGSRVL 636
R F+KGA E + LT E + G RV+
Sbjct: 447 CVHRQDRSEMCFMKGAYEQVLKYCTYYQKKDGKTLTLTQQQRDVIQEEAAEMASAGLRVI 506
Query: 637 ALAFKSLPDMTVSDARSLHRDEVENGLTFAGFAVFNCPIREDSAKILSELKNSSQDLAMI 696
A A + LTF G N P R + ++ L + MI
Sbjct: 507 AFASGPE----------------KGQLTFLGLVGINDPPRPGVKEAVTTLITGGVRIIMI 550
Query: 697 TGDQALTACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLTDAHD 756
TGD TA +A ++ + +K + + + L+
Sbjct: 551 TGDSQETAVSIARRLGMPSKT-----------------SQSVSGEKLDAMDDQQLSQ--- 590
Query: 757 LCIGGDCFEMLQQTSAVLRVIPYVKVFARVAPEQKELILTTFKAVGRMTLMCGDGTNDVG 816
++P V VFAR +PE K I+ + G + M GDG ND
Sbjct: 591 -------------------IVPKVAVFARASPEHKMKIVKALQKRGDVVAMTGDGVNDAP 631
Query: 817 ALKQAHVGVAL 827
ALK A +GVA+
Sbjct: 632 ALKLADIGVAM 642
|
This model describes the P-type ATPase responsible for translocating calcium ions across the golgi membrane of fungi and animals , and is of particular importance in the sarcoplasmic reticulum of skeletal and cardiac muscle in vertebrates. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116. Length = 884 |
| >gnl|CDD|236705 PRK10517, PRK10517, magnesium-transporting ATPase MgtA; Provisional | Back alignment and domain information |
|---|
Score = 112 bits (283), Expect = 3e-25
Identities = 170/641 (26%), Positives = 247/641 (38%), Gaps = 163/641 (25%)
Query: 234 STMAKSRLKTLTEIRRVRVDNQTIMVHRCG------KWVKLAGTDLVPGDVVSIGRSSGQ 287
ST A LK + V N T V R W+++ LVPGD++ + ++G
Sbjct: 146 STKAADALKAM-------VSN-TATVLRVINDKGENGWLEIPIDQLVPGDIIKL--AAGD 195
Query: 288 TGEDKSVPADMLILGGSA---IVNEAILTGESTPQWKVS-IMGRETGEKLSARRDKSHVL 343
+PAD+ IL A V +A LTGES P K + E L + +
Sbjct: 196 M-----IPADLRIL--QARDLFVAQASLTGESLPVEKFATTRQPEHSNPL----ECDTLC 244
Query: 344 FGGTKILQHTPDKTFPLKTPDGGCLAVVLRTGFETSQGKLMRTILFSTERVTANSWE--- 400
F GT ++ G AVV+ TG T G+L RV+ E
Sbjct: 245 FMGTNVVS-------------GTAQAVVIATGANTWFGQL-------AGRVSEQDSEPNA 284
Query: 401 --------SGLFILFLVVFAVIAA---GYVLKKGMEDPTRSKYKLF-LSCSLIITSVIPP 448
S L I F++V A + GY KG D + LF LS ++ +T P
Sbjct: 285 FQQGISRVSWLLIRFMLVMAPVVLLINGYT--KG--DWWEAA--LFALSVAVGLT---PE 335
Query: 449 ELPMELSIAVNTSLIALARRGIFCTEPFRIPFAGKVDMCCFDKTGTLTSDDMEFRGVVGL 508
LPM ++ + + L+++ + I G +D+ C DKTGTLT D + +
Sbjct: 336 MLPMIVTSTLARGAVKLSKQKVIVKRLDAIQNFGAMDILCTDKTGTLTQDKIVLENHTDI 395
Query: 509 SNAELEDDMTKVPVRTQEILASCHALVFVDNKLVGDPLEKAALKGIDWSYKSDEKAMPKR 568
S E V L S H + N L+ A L+G+D +E A
Sbjct: 396 SGKTSER------VLHSAWLNS-HYQTGLKNL-----LDTAVLEGVD-----EESARSL- 437
Query: 569 GGGNAVQIVQRHHFASHLKRMSVVVRVQEEFFAFV-KGAPETI---------QDRLTDLP 618
+ Q + F +RMSVVV E + KGA E I + L
Sbjct: 438 --ASRWQKIDEIPFDFERRRMSVVVAENTEHHQLICKGALEEILNVCSQVRHNGEIVPLD 495
Query: 619 SSYIETYKKYTH----QGSRVLALAFKSLP----DMTVSDARSLHRDEVENGLTFAGFAV 670
+ K+ T QG RV+A+A K LP D +D E+ L G+
Sbjct: 496 DIMLRRIKRVTDTLNRQGLRVVAVATKYLPAREGDYQRAD---------ESDLILEGYIA 546
Query: 671 FNCPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLILCPVKNGKVY 730
F P +E +A L LK S + ++TGD L A V +V + VLI
Sbjct: 547 FLDPPKETTAPALKALKASGVTVKILTGDSELVAAKVCHEVGLDAGEVLI---------- 596
Query: 731 EWVSPDETEKIQYSEKEVEGLTDAHDLCIGGDCFEMLQQTSAVLRVIPYVKVFARVAPEQ 790
++E L+D + + R +FAR+ P
Sbjct: 597 --------------GSDIETLSDD-------------ELANLAER----TTLFARLTPMH 625
Query: 791 KELILTTFKAVGRMTLMCGDGTNDVGALKQAHVGVALLNAV 831
KE I+T K G + GDG ND AL+ A +G+++ AV
Sbjct: 626 KERIVTLLKREGHVVGFMGDGINDAPALRAADIGISVDGAV 666
|
Length = 902 |
| >gnl|CDD|215733 pfam00122, E1-E2_ATPase, E1-E2 ATPase | Back alignment and domain information |
|---|
Score = 103 bits (258), Expect = 1e-24
Identities = 56/239 (23%), Positives = 88/239 (36%), Gaps = 50/239 (20%)
Query: 240 RLKTLTEIRRVRVDNQTIMVHRCGKWVKLAGTDLVPGDVVSIGRSSGQTGEDKSVPADML 299
LK L V R GK ++ +LV GD+V + + G+ VPAD
Sbjct: 26 ALKKLLPPTAATVI-------RDGKEEEIPADELVVGDIVLL-----KPGD--RVPADGR 71
Query: 300 ILGGSAIVNEAILTGESTPQWKVSIMGRETGEKLSARRDKSHVLFGGTKILQHTPDKTFP 359
I+ GS V+E+ LTGES P K + +F GT +L
Sbjct: 72 IIEGSLEVDESALTGESLPVEK----------------SRGDTVFAGTVVL--------- 106
Query: 360 LKTPDGGCLAVVLRTGFETSQGKLMRTILFSTERVTANSWESGLFILFLVVFAVIAAGYV 419
G +V TG +T GK+ R + + T LV + A V
Sbjct: 107 ----SGELKVIVTATGEDTELGKIARLVEEAKSAKTPLQRLLDKLAKILVPIVLALAILV 162
Query: 420 LKKGM---EDPTRSKYKLFLSCSLIITSVIPPELPMELSIAVNTSLIALARRGIFCTEP 475
D + L + ++++ + P LP+ + +A+ LA++GI
Sbjct: 163 FLIWFFRGGDFLEA---LLRALAVLVAA-CPEALPLAVPLALAVGAGRLAKKGILVKNL 217
|
Length = 222 |
| >gnl|CDD|233509 TIGR01652, ATPase-Plipid, phospholipid-translocating P-type ATPase, flippase | Back alignment and domain information |
|---|
Score = 98.6 bits (246), Expect = 9e-21
Identities = 168/782 (21%), Positives = 276/782 (35%), Gaps = 215/782 (27%)
Query: 221 YSLFTLFM--LFMFESTMAKSRLKTLTEIRRVRVDNQ-----TIMVHRCGKWVKLAGTDL 273
T + F+ T K + + +IRR R D + T ++ G++V++ DL
Sbjct: 48 TYRGTSIVPLAFVLIVTAIK---EAIEDIRRRRRDKEVNNRLTEVLEGHGQFVEIPWKDL 104
Query: 274 VPGDVVSIGRSSGQTGEDKSVPADMLILG-----GSAIVNEAILTGESTPQWKVSIMGRE 328
GD+V + + D+ +PAD+L+L G V A L GE+ K+ E
Sbjct: 105 RVGDIVKVKK-------DERIPADLLLLSSSEPDGVCYVETANLDGET--NLKLRQALEE 155
Query: 329 TGEKLSARRDK------------SHVL-FGGTKILQHTPDKTFPLKTPD----------- 364
T + L K + + F G + D+ +PL +PD
Sbjct: 156 TQKMLDEDDIKNFSGEIECEQPNASLYSFQGNMTING--DRQYPL-SPDNILLRGCTLRN 212
Query: 365 -GGCLAVVLRTGFETSQGKLMRTILFSTERVTANSWESGL--------FILFLVVFA--- 412
+ VV+ TG +T KLMR A S S L ILF ++F
Sbjct: 213 TDWVIGVVVYTGHDT---KLMRN------ATQAPSKRSRLEKELNFLIIILFCLLFVLCL 263
Query: 413 --VIAAGYVLKKGMED---------PTRSKYKLFLS--CSLIITSVIPPELPMELSIAVN 459
+ AG +D + F S LI+ S + P +S+ V+
Sbjct: 264 ISSVGAGIWNDAHGKDLWYIRLDVSERNAAANGFFSFLTFLILFSSLIP-----ISLYVS 318
Query: 460 TSLIALARRGIFCTEPFRI-------PFA----------GKVDMCCFDKTGTLTSDDMEF 502
L+ + F ++ P + G+V+ DKTGTLT + MEF
Sbjct: 319 LELVKSVQ-AYFINSDLQMYHEKTDTPASVRTSNLNEELGQVEYIFSDKTGTLTQNIMEF 377
Query: 503 R-----GV----------------VGLSNAELED--------------------DMTKVP 521
+ GV +G
Sbjct: 378 KKCSIAGVSYGDGFTEIKDGIRERLGSYVENENSMLVESKGFTFVDPRLVDLLKTNKPNA 437
Query: 522 VRTQEI---LASCHALV--FVDNKLVG------DPLEKAALKG--------IDWSYKSDE 562
R E LA CH +V F D+ P E A +K + + KS
Sbjct: 438 KRINEFFLALALCHTVVPEFNDDGPEEITYQAASPDEAALVKAARDVGFVFFERTPKSIS 497
Query: 563 KAMPKRGGGNAVQIVQRHHFASHLKRMSVVVRVQE-EFFAFVKGAPETIQDRLTDLPSSY 621
+ G +I+ F S KRMSV+VR + KGA I RL+ +
Sbjct: 498 LLIEMHGETKEYEILNVLEFNSDRKRMSVIVRNPDGRIKLLCKGADTVIFKRLSSGGNQV 557
Query: 622 IETYKKYTHQ----GSRVLALAFKSLPDMTVSD--------ARSLHRDE---------VE 660
E K++ G R L +A++ L + + + +L E +E
Sbjct: 558 NEETKEHLENYASEGLRTLCIAYRELSEEEYEEWNEEYNEASTALTDREEKLDVVAESIE 617
Query: 661 NGLTFAGFAVFNCPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLI 720
L G ++E + + L+ + + ++TGD+ TA + ++++ +
Sbjct: 618 KDLILLGATAIEDKLQEGVPETIELLRQAGIKIWVLTGDKVETAINIGYSCRLLSRNMEQ 677
Query: 721 LCPVKNGKV-YEWVSPDETEKIQYSEKEVEGLTDAHDLC--IGGDC----------FEML 767
+ + V ++ + +E L D+ ++ I G E L
Sbjct: 678 IVITSDSLDATRSVEAAIKFGLEGTSEEFNNLGDSGNVALVIDGKSLGYALDEELEKEFL 737
Query: 768 Q---QTSAVLRVIPYVKVFARVAPEQKELILTTFK-AVGRMTLMCGDGTNDVGALKQAHV 823
Q + AV + RV+P QK ++ K + G+ TL GDG NDV +++A V
Sbjct: 738 QLALKCKAV--------ICCRVSPSQKADVVRLVKKSTGKTTLAIGDGANDVSMIQEADV 789
Query: 824 GV 825
GV
Sbjct: 790 GV 791
|
This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes. Length = 1057 |
| >gnl|CDD|130586 TIGR01523, ATPase-IID_K-Na, potassium and/or sodium efflux P-type ATPase, fungal-type | Back alignment and domain information |
|---|
Score = 92.4 bits (229), Expect = 8e-19
Identities = 157/747 (21%), Positives = 265/747 (35%), Gaps = 215/747 (28%)
Query: 242 KTLTEIRRVRVDNQTIMVHRCGKWVKLAGTDLVPGDVVSIGRSSGQTGEDKSVPADM-LI 300
KT+ ++ + ++ R GK + DLVPGD+ + +TG+ ++PAD+ LI
Sbjct: 107 KTMDSLKNLASPMAHVI--RNGKSDAIDSHDLVPGDICLL-----KTGD--TIPADLRLI 157
Query: 301 LGGSAIVNEAILTGESTPQWK----VSIMGRET--GEKLSARRDKSHVLFGGTKILQHTP 354
+ +EA+LTGES P K +T G++++ S V G K
Sbjct: 158 ETKNFDTDEALLTGESLPVIKDAHATFGKEEDTPIGDRINLAFSSSAVTKGRAK------ 211
Query: 355 DKTFPLKTPDGGCLAVVLRTGFETSQGKLMRTI-----LFS-------TERVTANSWESG 402
+ + T + G + + LF +R N W
Sbjct: 212 --------------GICIATALNSEIGAIAAGLQGDGGLFQRPEKDDPNKRRKLNKWILK 257
Query: 403 L-------------------------FILFLVVFAVIAAGYVLKKGMEDPTRSKYKLFLS 437
+ ILF + A+I A V+ D + +
Sbjct: 258 VTKKVTGAFLGLNVGTPLHRKLSKLAVILFCI--AIIFAIIVMAAHKFDVDKEVAIYAIC 315
Query: 438 CSLIITSVIPPELPMELSIAVNTSLIALARRGIFCTEPFRIPFAGKVDMCCFDKTGTLTS 497
++ S+IP L LSI + +++R + + + G V+ C DKTGT+T
Sbjct: 316 LAI---SIIPESLIAVLSITMAMGAANMSKRNVIVRKLDALEALGAVNDICSDKTGTITQ 372
Query: 498 DDMEFR-------GVVGLSNA----------------------------------ELEDD 516
M R G + + N+ E +D+
Sbjct: 373 GKMIARQIWIPRFGTISIDNSDDAFNPNEGNVSGIPRFSPYEYSHNEAADQDILKEFKDE 432
Query: 517 MTKVPVRT-------QEILASCH----ALVFVDN-----KLVGDPLEKA----------- 549
+ ++ + ++L + A VF D+ K GDP E A
Sbjct: 433 LKEIDLPEDIDMDLFIKLLETAALANIATVFKDDATDCWKAHGDPTEIAIHVFAKKFDLP 492
Query: 550 --ALKGIDWSYKSDEKAMP------KRGGGNAVQIVQRHHFASHLKRMSVVVRVQ--EEF 599
AL G + KS+E ++ G + + F S +KRM+ + E +
Sbjct: 493 HNALTGEEDLLKSNENDQSSLSQHNEKPGSAQFEFIAEFPFDSEIKRMASIYEDNHGETY 552
Query: 600 FAFVKGAPETIQDR-----------LTDLPSSYIETYKK----YTHQGSRVLALAFKSLP 644
+ KGA E I + ++ L E +G RVLA A KS
Sbjct: 553 NIYAKGAFERIIECCSSSNGKDGVKISPLEDCDRELIIANMESLAAEGLRVLAFASKSFD 612
Query: 645 DMTVSDAR----SLHRDEVENGLTFAGFAVFNCPIREDSAKILSELKNSSQDLAMITGDQ 700
+D + +L+R E+ L F G P R +SA + + + ++ M+TGD
Sbjct: 613 KADNNDDQLKNETLNRATAESDLEFLGLIGIYDPPRNESAGAVEKCHQAGINVHMLTGDF 672
Query: 701 ALTACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLTDAHDLCIG 760
TA +A +V I+ I ++ ++ + +
Sbjct: 673 PETAKAIAQEVGIIP----------------------PNFIHDRDEIMDSMV------MT 704
Query: 761 GDCFEMLQQTSA-VLRVIPYVKVFARVAPEQKELILTTFKAVGRMTLMCGDGTNDVGALK 819
G F+ L L+ + V AR AP+ K ++ M GDG ND +LK
Sbjct: 705 GSQFDALSDEEVDDLKALCL--VIARCAPQTKVKMIEALHRRKAFCAMTGDGVNDSPSLK 762
Query: 820 QAHVGVALLNAVPPTQSGNSSSEASKD 846
A+VG+A+ G + S+ +KD
Sbjct: 763 MANVGIAM---------GINGSDVAKD 780
|
Initially described as a calcium efflux ATPase , more recent work has shown that the S. pombe CTA3 gene is in fact a potassium ion efflux pump. This model describes the clade of fungal P-type ATPases responsible for potassium and sodium efflux. The degree to which these pumps show preference for sodium or potassium varies. This group of ATPases has been classified by phylogentic analysis as type IID. The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump. Length = 1053 |
| >gnl|CDD|130176 TIGR01106, ATPase-IIC_X-K, sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit | Back alignment and domain information |
|---|
Score = 73.3 bits (180), Expect = 6e-13
Identities = 145/645 (22%), Positives = 245/645 (37%), Gaps = 122/645 (18%)
Query: 255 QTIMVHRCGKWVKLAGTDLVPGDVVSIGRSSGQTGEDKSVPADMLILGGSAI-VNEAILT 313
Q +V R G+ + + +V GD+V + G D+ +PAD+ I+ V+ + LT
Sbjct: 141 QQALVIRDGEKMSINAEQVVVGDLVEV------KGGDR-IPADLRIISAQGCKVDNSSLT 193
Query: 314 GESTPQWKVSIMGRETGEKLSARRDKSHVLFGGTKILQHTPDKTFPLKTPDGGCLAVV-- 371
GES PQ + E L R ++ F T ++ T + + T D + +
Sbjct: 194 GESEPQTRSPEFTHEN--PLETR----NIAFFSTNCVEGTA-RGIVVNTGDRTVMGRIAS 246
Query: 372 LRTGFETSQGKLMRTILFSTERVTANSWESGLFILFLVVFAVIAA--GYVLKKGMEDPTR 429
L +G E + + I +T G+ + V F +++ GY + +
Sbjct: 247 LASGLENGKTPIAIEIEHFIHIIT------GVAVFLGVSFFILSLILGYTWLEAV----- 295
Query: 430 SKYKLFLSCSLIITSVIPPELPMELSIAVNTSLIALARRGIFCTEPFRIPFAGKVDMCCF 489
+FL II + +P L +++ + + +AR+ + G C
Sbjct: 296 ----IFLIG--IIVANVPEGLLATVTVCLTLTAKRMARKNCLVKNLEAVETLGSTSTICS 349
Query: 490 DKTGTLTSDDMEFRGVVGLSNAELEDDMTKVPVRTQ------------EILASCHALVFV 537
DKTGTLT + M + N E D T+ I C+ VF
Sbjct: 350 DKTGTLTQNRMTV-AHMWFDNQIHEADTTEDQSGVSFDKSSATWLALSRIAGLCNRAVFK 408
Query: 538 DNK---------LVGDPLEKAALKGIDWSYKSDEKAMPKR---------GGGNAVQIVQR 579
+ + GD E A LK I+ M +R N Q+
Sbjct: 409 AGQENVPILKRAVAGDASESALLKCIELCL-GSVMEMRERNPKVVEIPFNSTNKYQLSIH 467
Query: 580 HHFASHLKRMSVVVRVQEEFFAFVKGAPETIQDRLTD---------LPSSYIETYKKYTH 630
+ R +V+ KGAPE I +R + L E ++
Sbjct: 468 ENEDPRDPRHLLVM----------KGAPERILERCSSILIHGKEQPLDEELKEAFQNAYL 517
Query: 631 Q----GSRVLALAFKSLPDMTVSDARSLHRDEVE---NGLTFAGFAVFNCPIREDSAKIL 683
+ G RVL LPD + D+V + L F G P R +
Sbjct: 518 ELGGLGERVLGFCHLYLPDEQFPEGFQFDTDDVNFPTDNLCFVGLISMIDPPRAAVPDAV 577
Query: 684 SELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQY 743
+ +++ + M+TGD +TA +A V I+++ N V + + Q
Sbjct: 578 GKCRSAGIKVIMVTGDHPITAKAIAKGVGIISE--------GNETVEDIAARLNIPVSQV 629
Query: 744 SEKEVEGLTDAHDLCI--GGDCFEML-QQTSAVLRVIPYVKVFARVAPEQKELILTTFKA 800
+ ++ + C+ G D +M +Q +L+ + VFAR +P+QK +I+ +
Sbjct: 630 NPRDAKA-------CVVHGSDLKDMTSEQLDEILKYHTEI-VFARTSPQQKLIIVEGCQR 681
Query: 801 VGRMTLMCGDGTNDVGALKQAHVGVALLNAVPPTQSGNSSSEASK 845
G + + GDG ND ALK+A +GVA+ G + S+ SK
Sbjct: 682 QGAIVAVTGDGVNDSPALKKADIGVAM---------GIAGSDVSK 717
|
This model describes the P-type ATPases responsible for the exchange of either protons or sodium ions for potassium ions across the plasma membranes of eukaryotes. Unlike most other P-type ATPases, members of this subfamily require a beta subunit for activity. This model encompasses eukaryotes and consists of two functional types, a Na/K antiporter found widely distributed in eukaryotes and a H/K antiporter found only in vertebrates. The Na+ or H+/K+ antiporter P-type ATPases have been characterized as Type IIC based on a published phylogenetic analysis. Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps [Energy metabolism, ATP-proton motive force interconversion]. Length = 997 |
| >gnl|CDD|225127 COG2217, ZntA, Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Score = 71.5 bits (176), Expect = 2e-12
Identities = 80/338 (23%), Positives = 129/338 (38%), Gaps = 105/338 (31%)
Query: 219 WYYSLF-TLFMLFMFESTM------------AKSRLKTLTEIR----------RVRVDNQ 255
+ YSL+ TLF ++ E+ M A+++ + IR V +
Sbjct: 161 YAYSLYATLFPVYFEEAAMLIFLFLLGRYLEARAKGRARRAIRALLDLAPKTATVVRGD- 219
Query: 256 TIMVHRCGKWVKLAGTDLVPGDVVSIGRSSGQTGEDKSVPADMLILGGSAIVNEAILTGE 315
G+ ++ ++ GD+V + + GE +P D +++ GS+ V+E++LTGE
Sbjct: 220 -------GEEEEVPVEEVQVGDIVLV-----RPGE--RIPVDGVVVSGSSSVDESMLTGE 265
Query: 316 STPQWKVSIMGRETGEKLSARRDKSHVLFGGTKILQHTPDKTFPLKTPDGGCLAVVLRTG 375
S P K + G++ +F GT L DG V R G
Sbjct: 266 SLPVEK------KPGDE----------VFAGTVNL-------------DGSLTIRVTRVG 296
Query: 376 FET-----------SQGKLMRTILFSTERVTANSWESGLFILFLVVFAVIAAGYVLKKGM 424
+T +Q + +RV + F+ ++V A + G
Sbjct: 297 ADTTLARIIRLVEEAQSSKAPIQRLA-DRV------ASYFVPVVLVIAALTFALWPLFGG 349
Query: 425 EDPTRSKYKLFLSCSLIITSVIPPELPMELSIAVNTSLIA----LARRGIFCTEPFR--- 477
D + Y+ L+ L+I P L +A T+++ ARRGI +
Sbjct: 350 GDWETALYR-ALAV-LVIAC------PCALGLATPTAILVGIGRAARRGIL----IKGGE 397
Query: 478 -IPFAGKVDMCCFDKTGTLTSDDMEFRGVVGLSNAELE 514
+ KVD FDKTGTLT E VV L E E
Sbjct: 398 ALERLAKVDTVVFDKTGTLTEGKPEVTDVVALDGDEDE 435
|
Length = 713 |
| >gnl|CDD|237914 PRK15122, PRK15122, magnesium-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Score = 65.4 bits (160), Expect = 1e-10
Identities = 61/253 (24%), Positives = 99/253 (39%), Gaps = 58/253 (22%)
Query: 587 KRMSVVV-RVQEEFFAFVKGAPE-------TIQDRLTDLP------SSYIETYKKYTHQG 632
+R+SVVV Q + KGA E ++D T P + + Y G
Sbjct: 452 RRLSVVVEDAQGQHLLICKGAVEEMLAVATHVRDGDTVRPLDEARRERLLALAEAYNADG 511
Query: 633 SRVLALAFKSLPDMTVSDARSLHRDEVENGLTFAGFAVFNCPIREDSAKILSELKNSSQD 692
RVL +A + +P ++R+ + E L GF F P +E +A ++ L+ +
Sbjct: 512 FRVLLVATREIPG---GESRAQYSTADERDLVIRGFLTFLDPPKESAAPAIAALRENGVA 568
Query: 693 LAMITGDQALTACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLT 752
+ ++TGD + + +V + +P L E+E +
Sbjct: 569 VKVLTGDNPIVTAKICREVGL--EPGEPLL----------------------GTEIEAMD 604
Query: 753 DAHDLCIGGDCFEMLQQTSAVLRVIPYVKVFARVAPEQKELILTTFKAVGRMTLMCGDGT 812
DA A+ R + VFA++ P QK +L +A G GDG
Sbjct: 605 DA-----------------ALAREVEERTVFAKLTPLQKSRVLKALQANGHTVGFLGDGI 647
Query: 813 NDVGALKQAHVGV 825
ND AL+ A VG+
Sbjct: 648 NDAPALRDADVGI 660
|
Length = 903 |
| >gnl|CDD|233447 TIGR01525, ATPase-IB_hvy, heavy metal translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 62.3 bits (152), Expect = 9e-10
Identities = 62/324 (19%), Positives = 117/324 (36%), Gaps = 72/324 (22%)
Query: 210 VGLWCLDEYW-YYSLFTLFMLFMFESTMAKSR----LKTL-----TEIRRVRVDNQTIMV 259
+ + + L LF+L AK R L L + R ++ D
Sbjct: 10 IAAYAMGLVLEGALLLFLFLLGETLEERAKGRASDALSALLALAPSTARVLQGDGSE--- 66
Query: 260 HRCGKWVKLAGTDLVPGDVVSIGRSSGQTGEDKSVPADMLILGGSAIVNEAILTGESTPQ 319
++ +L GD+V + GE +P D +++ G + V+E+ LTGES P
Sbjct: 67 ------EEVPVEELQVGDIVIVR-----PGE--RIPVDGVVISGESEVDESALTGESMPV 113
Query: 320 WKVSIMGRETGEKLSARRDKSHVLFGGTKILQHTPDKTFPLKTPDGGCLAVVLRTGFETS 379
K + G+++ F GT DG V + G +++
Sbjct: 114 EK------KEGDEV----------FAGTING-------------DGSLTIRVTKLGEDST 144
Query: 380 QGKLMRTILFSTERVT-----ANSWESGLFILFLVVFAVIAAGYVLKKGMEDPTRSKYKL 434
+++ + + A+ S L + + ++ + R+ L
Sbjct: 145 LAQIVELVEEAQSSKAPIQRLADRIASYYVPAVLAIALLTFVVWLALGALGALYRALAVL 204
Query: 435 FLS--CSLIITSVIPPELPMELSIAVNTSLIALARRGIFCTEPFRIPFAGKVDMCCFDKT 492
++ C+L + + +A+ ++ ARRGI + KV FDKT
Sbjct: 205 VVACPCALGLAT----------PVAILVAIGVAARRGILIKGGDALEKLAKVKTVVFDKT 254
Query: 493 GTLTSDDMEFRGVVGLSNAELEDD 516
GTLT+ + L +A + ++
Sbjct: 255 GTLTTGKPTVVDIEPLDDASISEE 278
|
This model encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512. Length = 556 |
| >gnl|CDD|237914 PRK15122, PRK15122, magnesium-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Score = 62.4 bits (152), Expect = 1e-09
Identities = 82/287 (28%), Positives = 123/287 (42%), Gaps = 56/287 (19%)
Query: 232 FESTMAKSRLK-----TLTEIRRVRVDNQTIMVHRCGKWVKLAGTDLVPGDVVSIGRSSG 286
F S A LK T T +RR + + ++ +LVPGD+V + S+G
Sbjct: 133 FRSNKAAEALKAMVRTTATVLRRGHAGAEPVRR-------EIPMRELVPGDIVHL--SAG 183
Query: 287 QTGEDKSVPADM-LILGGSAIVNEAILTGESTPQWKVSIMGRETGEKLSARRDKSHVL-- 343
+PAD+ LI +++A+LTGE+ P K +G G+ A D L
Sbjct: 184 DM-----IPADVRLIESRDLFISQAVLTGEALPVEKYDTLGAVAGKSADALADDEGSLLD 238
Query: 344 -----FGGTKILQHTPDKTFPLKTPDGGCLAVVLRTGFETSQGKLMRTILFSTER----- 393
F GT ++ G AVV+ TG T G L ++I+ + +
Sbjct: 239 LPNICFMGTNVVS-------------GTATAVVVATGSRTYFGSLAKSIVGTRAQTAFDR 285
Query: 394 -VTANSWESGLFILFLVVFAVIAAGYVLKKGMEDPTRSKYKLFLSCSLIITSVIPPE-LP 451
V + SW L I F++V + +L G + LF +L + + PE LP
Sbjct: 286 GVNSVSW---LLIRFMLVMVPVV---LLINGFTKGDWLEALLF---ALAVAVGLTPEMLP 336
Query: 452 MELSIAVNTSLIALARRGIFCTEPFRIPFAGKVDMCCFDKTGTLTSD 498
M +S + IA+ARR + I G +D+ C DKTGTLT D
Sbjct: 337 MIVSSNLAKGAIAMARRKVVVKRLNAIQNFGAMDVLCTDKTGTLTQD 383
|
Length = 903 |
| >gnl|CDD|223550 COG0474, MgtA, Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Score = 62.0 bits (151), Expect = 2e-09
Identities = 42/250 (16%), Positives = 72/250 (28%), Gaps = 17/250 (6%)
Query: 929 DASM-ASPFTAKHASVAPTTDIIRQGRSTLVTTLQMFKILGLNCLATAYVLSVMYLDGVK 987
DA+ A+ + A + +GR V + L + L + L +
Sbjct: 669 DAAKEAADIVLLDDNFATIVLAVVEGRRVYVNIKKFILYLLSKNVGEVLTLLIYSLFNLF 728
Query: 988 ---LGDVQATISGVFT---AAFFLFISHARPLP-TLSAARPHPNIFCSYVFLSLMGQFAI 1040
L +Q + T A L + P +F +F + +
Sbjct: 729 FLPLTPLQLLWINLLTDSLPALALGVEDPESDVMKRPPRGPEEGLFNRKIFWRFILIIGL 788
Query: 1041 HLFFLISSVKEAEKYMPDECIEPDADFHPNLVNTVSYMVNMMIQVATFAVNYMGHPFNQS 1100
L F L T ++ ++ + T AV G PF S
Sbjct: 789 LSAILFILTFLLYLLGFIANTLGLDLFQALLQTTAFTVLVLIQLLLTLAVRSRGRPFLSS 848
Query: 1101 -ISENKPFMYALMG--AVGFFTVITSDLLRSLNDWLKLVPLPSGLRDKLL-IWAGLMFLG 1156
+ NK AL+ + + L + P P L + L+ I L+ L
Sbjct: 849 LLFSNKYLWLALLVIIILQLLIIFLPPLNLKI-----FQPTPLSLFEWLIAIAVALLLLY 903
Query: 1157 CYSWERFLRW 1166
E +
Sbjct: 904 IVVSELYKLK 913
|
Length = 917 |
| >gnl|CDD|211664 TIGR01512, ATPase-IB2_Cd, heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 60.8 bits (148), Expect = 3e-09
Identities = 74/304 (24%), Positives = 119/304 (39%), Gaps = 72/304 (23%)
Query: 210 VGLWCLDEYWYYSLFTLFMLF-----MFESTMAKSRLKTLTEIRRVRVDNQTIMVHRCGK 264
+G + EY +L L + S A+ LK L E+ T V R G
Sbjct: 10 LGAVAIGEYLEGALLLLLFSIGETLEEYASGRARRALKALMELAP-----DTARVLRGGS 64
Query: 265 WVKLAGTDLVPGDVVSIGRSSGQTGEDKSVPADMLILGGSAIVNEAILTGESTPQWKVSI 324
++A +L GDVV + GE VP D ++L G++ V+E+ LTGES P V
Sbjct: 65 LEEVAVEELKVGDVVVVK-----PGE--RVPVDGVVLSGTSTVDESALTGESVP---VE- 113
Query: 325 MGRETGEKLSARRDKSHVLFGGTKILQHTPDKTFPLKTPDGGCLAVVLRTGFETSQGKLM 384
+ G+++ F G L DG VV + +++ K
Sbjct: 114 --KAPGDEV----------FAGAINL-------------DGVLTIVVTKLPADSTIAK-- 146
Query: 385 RTILFSTERVTANSWESGLFI------LFLVVFAVIAAGYVLKKGMEDPTRSKYK--LFL 436
I+ E + ++ FI VV A+ A +++ ++ Y+ + L
Sbjct: 147 --IVNLVEEAQSRKAKTQRFIDRFARYYTPVVLAIALAIWLVPGLLKRWPFWVYRALVLL 204
Query: 437 ----SCSLIITSVIPPELPMELSIAVNTSLIALARRGIFCTEPFRIPFAGKVDMCCFDKT 492
C+L+I++ A +++ A AR GI + K+ FDKT
Sbjct: 205 VVASPCALVISA----------PAAYLSAISAAARHGILIKGGAALEALAKIKTVAFDKT 254
Query: 493 GTLT 496
GTLT
Sbjct: 255 GTLT 258
|
This model describes the P-type ATPase primarily responsible for translocating cadmium ions (and other closely-related divalent heavy metals such as cobalt, mercury, lead and zinc) across biological membranes. These transporters are found in prokaryotes and plants. Experimentally characterized members of the seed alignment include: SP|P37617 from E. coli, SP|Q10866 from Mycobacterium tuberculosis and SP|Q59998 from Synechocystis PCC6803. The cadmium P-type ATPases have been characterized as Type IB based on a phylogenetic analysis which combines the copper-translocating ATPases with the cadmium-translocating species. This model and that describing the copper-ATPases (TIGR01511) are well separated, and thus we further type the copper-ATPases as IB1 and the cadmium-ATPases as IB2. Several sequences which have not been characterized experimentally fall just below trusted cutoff for both of these models (SP|Q9CCL1 from Mycobacterium leprae, GP|13816263 from Sulfolobus solfataricus, OMNI|NTL01CJ01098 from Campylobacter jejuni, OMNI|NTL01HS01687 from Halobacterium sp., GP|6899169 from Ureaplasma urealyticum and OMNI|HP1503 from Helicobacter pylori) [Transport and binding proteins, Cations and iron carrying compounds]. Length = 536 |
| >gnl|CDD|233445 TIGR01511, ATPase-IB1_Cu, copper-(or silver)-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 60.0 bits (146), Expect = 6e-09
Identities = 63/328 (19%), Positives = 112/328 (34%), Gaps = 68/328 (20%)
Query: 202 FFVFQVFCVGLWCLDEYWYYSLFTLFMLFM---FESTMAKSRLKTLTEIRRVR--VDNQT 256
V ++ + L + + +AK R + ++ +
Sbjct: 36 LVALLANQVLTGLHVHTFFDASAMLITFILLGRWLEMLAKGR--ASDALSKLAKLQPSTA 93
Query: 257 IMVHRCGKWVKLAGTDLVPGDVVSIGRSSGQTGEDKSVPADMLILGGSAIVNEAILTGES 316
++ G+ ++ L PGD+V + GE +P D ++ G + V+E+++TGES
Sbjct: 94 TLLTDDGEIEEVPVELLQPGDIVRV-----LPGE--KIPVDGTVIEGESEVDESLVTGES 146
Query: 317 TPQWKVSIMGRETGEKLSARRDKSHVLFGGTKILQHTPDKTFPLKTPDGGCLAVVLRTGF 376
P K + G + GT + T + LA ++R
Sbjct: 147 LPVPK------KVG----------DPVIAGT-VNGTGSLVVRATATGEDTTLAQIVRLVR 189
Query: 377 ETSQGK--LMRT----------ILFSTERVTANSWESGLFILFLVVFAVIAAGYVLKKGM 424
+ Q K + R ++ + +T W L + VFA+ A V
Sbjct: 190 QAQQSKAPIQRLADKVAGYFVPVVIAIALITFVIW---LILGADFVFALEVAVTV----- 241
Query: 425 EDPTRSKYKLFLSCSLIITSVIPPELPMELSIAVNTSLIALARRGIFCTEPFRIPFAGKV 484
L ++C + P IAV T L A+ G+ + + A +
Sbjct: 242 ---------LIIACPCALGLATP------TVIAVATGL--AAKNGVLIKDGDALERAANI 284
Query: 485 DMCCFDKTGTLTSDDMEFRGVVGLSNAE 512
D FDKTGTLT V ++
Sbjct: 285 DTVVFDKTGTLTQGKPTVTDVHVFGESD 312
|
This model describes the P-type ATPase primarily responsible for translocating copper ions accross biological membranes. These transporters are found in prokaryotes and eukaryotes. This model encompasses those species which pump copper ions out of cells or organelles (efflux pumps such as CopA of Escherichia coli ) as well as those which pump the ion into cells or organelles either for the purpose of supporting life in extremely low-copper environments (for example CopA of Enterococcus hirae ) or for the specific delivery of copper to a biological complex for which it is a necessary component (for example FixI of Bradyrhizobium japonicum, or CtaA and PacS of Synechocystis). The substrate specificity of these transporters may, to a varying degree, include silver ions (for example, CopA from Archaeoglobus fulgidus). Copper transporters from this family are well known as the genes which are mutated in two human disorders of copper metabolism, Wilson's and Menkes' diseases. The sequences contributing to the seed of this model are all experimentally characterized. The copper P-type ATPases have been characterized as Type IB based on a phylogenetic analysis which combines the copper-translocating ATPases with the cadmium-translocating species. This model and that describing the cadmium-ATPases (TIGR01512) are well separated, and thus we further type the copper-ATPases as IB1 (and the cadmium-ATPases as IB2). Several sequences which have not been characterized experimentally fall just below the cutoffs for both of these models. A sequence from Enterococcus faecalis scores very high against this model, but yet is annotated as an "H+/K+ exchanging ATPase". BLAST of this sequence does not hit anything else annotated in this way. This error may come from the characterization paper published in 1987. Accession GP|7415611 from Saccharomyces cerevisiae appears to be mis-annotated as a cadmium resistance protein. Accession OMNI|NTL01HS00542 from Halobacterium which scores above trusted for this model is annotated as "molybdenum-binding protein" although no evidence can be found for this classification [Cellular processes, Detoxification, Transport and binding proteins, Cations and iron carrying compounds]. Length = 572 |
| >gnl|CDD|233447 TIGR01525, ATPase-IB_hvy, heavy metal translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 54.9 bits (133), Expect = 2e-07
Identities = 25/73 (34%), Positives = 33/73 (45%), Gaps = 5/73 (6%)
Query: 760 GGDCFEML-----QQTSAVLRVIPYVKVFARVAPEQKELILTTFKAVGRMTLMCGDGTND 814
GG ML AV + +V A + PE K I+ + G + M GDG ND
Sbjct: 400 GGIKLVMLTGDNRSAAEAVAAELGIDEVHAELLPEDKLAIVKELQEEGGVVAMVGDGIND 459
Query: 815 VGALKQAHVGVAL 827
AL A VG+A+
Sbjct: 460 APALAAADVGIAM 472
|
This model encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512. Length = 556 |
| >gnl|CDD|225127 COG2217, ZntA, Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Score = 53.8 bits (130), Expect = 5e-07
Identities = 21/45 (46%), Positives = 25/45 (55%)
Query: 782 VFARVAPEQKELILTTFKAVGRMTLMCGDGTNDVGALKQAHVGVA 826
V A + PE K I+ +A GR M GDG ND AL A VG+A
Sbjct: 579 VRAELLPEDKAEIVRELQAEGRKVAMVGDGINDAPALAAADVGIA 623
|
Length = 713 |
| >gnl|CDD|233445 TIGR01511, ATPase-IB1_Cu, copper-(or silver)-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 51.5 bits (124), Expect = 2e-06
Identities = 19/47 (40%), Positives = 27/47 (57%)
Query: 781 KVFARVAPEQKELILTTFKAVGRMTLMCGDGTNDVGALKQAHVGVAL 827
V A V P+ K ++ + G++ M GDG ND AL QA VG+A+
Sbjct: 455 NVRAEVLPDDKAALIKKLQEKGKVVAMVGDGINDAPALAQADVGIAI 501
|
This model describes the P-type ATPase primarily responsible for translocating copper ions accross biological membranes. These transporters are found in prokaryotes and eukaryotes. This model encompasses those species which pump copper ions out of cells or organelles (efflux pumps such as CopA of Escherichia coli ) as well as those which pump the ion into cells or organelles either for the purpose of supporting life in extremely low-copper environments (for example CopA of Enterococcus hirae ) or for the specific delivery of copper to a biological complex for which it is a necessary component (for example FixI of Bradyrhizobium japonicum, or CtaA and PacS of Synechocystis). The substrate specificity of these transporters may, to a varying degree, include silver ions (for example, CopA from Archaeoglobus fulgidus). Copper transporters from this family are well known as the genes which are mutated in two human disorders of copper metabolism, Wilson's and Menkes' diseases. The sequences contributing to the seed of this model are all experimentally characterized. The copper P-type ATPases have been characterized as Type IB based on a phylogenetic analysis which combines the copper-translocating ATPases with the cadmium-translocating species. This model and that describing the cadmium-ATPases (TIGR01512) are well separated, and thus we further type the copper-ATPases as IB1 (and the cadmium-ATPases as IB2). Several sequences which have not been characterized experimentally fall just below the cutoffs for both of these models. A sequence from Enterococcus faecalis scores very high against this model, but yet is annotated as an "H+/K+ exchanging ATPase". BLAST of this sequence does not hit anything else annotated in this way. This error may come from the characterization paper published in 1987. Accession GP|7415611 from Saccharomyces cerevisiae appears to be mis-annotated as a cadmium resistance protein. Accession OMNI|NTL01HS00542 from Halobacterium which scores above trusted for this model is annotated as "molybdenum-binding protein" although no evidence can be found for this classification [Cellular processes, Detoxification, Transport and binding proteins, Cations and iron carrying compounds]. Length = 572 |
| >gnl|CDD|225126 COG2216, KdpB, High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Score = 49.6 bits (119), Expect = 9e-06
Identities = 26/63 (41%), Positives = 35/63 (55%), Gaps = 10/63 (15%)
Query: 784 ARVAPEQKELILTTFKAVGRMTLMCGDGTNDVGALKQAHVGVALLNAVPPTQSGNSSSEA 843
A PE K ++ +A GR+ M GDGTND AL QA VGVA+ NS ++A
Sbjct: 491 AEATPEDKLALIRQEQAEGRLVAMTGDGTNDAPALAQADVGVAM----------NSGTQA 540
Query: 844 SKD 846
+K+
Sbjct: 541 AKE 543
|
Length = 681 |
| >gnl|CDD|234905 PRK01122, PRK01122, potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Score = 49.0 bits (118), Expect = 1e-05
Identities = 25/59 (42%), Positives = 34/59 (57%), Gaps = 10/59 (16%)
Query: 788 PEQKELILTTFKAVGRMTLMCGDGTNDVGALKQAHVGVALLNAVPPTQSGNSSSEASKD 846
PE K ++ +A GR+ M GDGTND AL QA VGVA+ NS ++A+K+
Sbjct: 493 PEDKLALIRQEQAEGRLVAMTGDGTNDAPALAQADVGVAM----------NSGTQAAKE 541
|
Length = 679 |
| >gnl|CDD|225126 COG2216, KdpB, High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Score = 48.8 bits (117), Expect = 2e-05
Identities = 36/137 (26%), Positives = 65/137 (47%), Gaps = 26/137 (18%)
Query: 220 YYSLFTLFMLFM-----FESTMAKSRLKTLTE-IRRVRVDNQTIMVHRCGKWVKLAGTDL 273
+ T+ + F F +A+ R K + +R+ + + ++ G + T+L
Sbjct: 64 FNLAITIILWFTVLFANFAEAVAEGRGKAQADSLRKTKTETIARLLRADGSIEMVPATEL 123
Query: 274 VPGDVVSIGRSSGQTGEDKSVPADMLILGGSAIVNEAILTGESTPQWKVSIMGRETGEKL 333
GD+V + + GE +P+D ++ G A V+E+ +TGES P ++ RE+G
Sbjct: 124 KKGDIVLV-----EAGE--IIPSDGEVIEGVASVDESAITGESAP-----VI-RESGG-- 168
Query: 334 SARRDKSHVLFGGTKIL 350
D S V GGT++L
Sbjct: 169 ----DFSSVT-GGTRVL 180
|
Length = 681 |
| >gnl|CDD|234905 PRK01122, PRK01122, potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Score = 48.3 bits (116), Expect = 2e-05
Identities = 39/138 (28%), Positives = 65/138 (47%), Gaps = 26/138 (18%)
Query: 219 WYYSLFTLFMLFM-----FESTMAKSRLKTLTE-IRRVRVDNQTIMVHRCGKWVKLAGTD 272
+ TL++ F F +A+ R K + +R + D + G ++ T+
Sbjct: 63 GFNLAITLWLWFTVLFANFAEALAEGRGKAQADSLRGAKKDTFARKLREPGAAEEVPATE 122
Query: 273 LVPGDVVSIGRSSGQTGEDKSVPADMLILGGSAIVNEAILTGESTPQWKVSIMGRETGEK 332
L GD+V + + GE +PAD ++ G A V+E+ +TGES P ++ RE+G
Sbjct: 123 LRKGDIVLV-----EAGE--IIPADGEVIEGVASVDESAITGESAP-----VI-RESGG- 168
Query: 333 LSARRDKSHVLFGGTKIL 350
D S V GGT++L
Sbjct: 169 -----DFSSVT-GGTRVL 180
|
Length = 679 |
| >gnl|CDD|222006 pfam13246, Hydrolase_like2, Putative hydrolase of sodium-potassium ATPase alpha subunit | Back alignment and domain information |
|---|
Score = 43.8 bits (104), Expect = 2e-05
Identities = 24/83 (28%), Positives = 37/83 (44%), Gaps = 14/83 (16%)
Query: 538 DNKLVGDPLEKAALK---GIDWSYKSDEKAMPKRGGGNAVQIVQRHHFASHLKRMSVVVR 594
+++GDP E A L + + P+ V + F S KRMS V +
Sbjct: 16 GGEIIGDPTESALLVFAEKLGIDVEELRARYPR------VAEI---PFNSERKRMSTVHK 66
Query: 595 V--QEEFFAFVKGAPETIQDRLT 615
+ + + FVKGAPE I +R +
Sbjct: 67 LEDDDGYRLFVKGAPERILERCS 89
|
This is a putative hydrolase of the sodium-potassium ATPase alpha subunit. Length = 91 |
| >gnl|CDD|130561 TIGR01497, kdpB, K+-transporting ATPase, B subunit | Back alignment and domain information |
|---|
Score = 47.6 bits (113), Expect = 3e-05
Identities = 25/63 (39%), Positives = 35/63 (55%), Gaps = 10/63 (15%)
Query: 784 ARVAPEQKELILTTFKAVGRMTLMCGDGTNDVGALKQAHVGVALLNAVPPTQSGNSSSEA 843
A PE K ++ +A G++ M GDGTND AL QA VGVA+ NS ++A
Sbjct: 490 AEATPEDKIALIRQEQAEGKLVAMTGDGTNDAPALAQADVGVAM----------NSGTQA 539
Query: 844 SKD 846
+K+
Sbjct: 540 AKE 542
|
This model describes the P-type ATPase subunit of the complex responsible for translocating potassium ions across biological membranes in microbes. In E. coli and other species, this complex consists of the proteins KdpA, KdpB, KdpC and KdpF. KdpB is the ATPase subunit, while KdpA is the potassium-ion translocating subunit. The function of KdpC is unclear, although cit has been suggested to couple the ATPase subunit to the ion-translocating subunit , while KdpF serves to stabilize the complex. The potassium P-type ATPases have been characterized as Type IA based on a phylogenetic analysis which places this clade closest to the heavy-metal translocating ATPases (Type IB). Others place this clade closer to the Na+/K+ antiporter type (Type IIC) based on physical characteristics. This model is very clear-cut, with a strong break between trusted hits and noise. All members of the seed alignment, from Clostridium, Anabaena and E. coli are in the characterized table. One sequence above trusted, OMNI|NTL01TA01282, is apparently mis-annotated in the primary literature, but properly annotated by TIGR [Transport and binding proteins, Cations and iron carrying compounds]. Length = 675 |
| >gnl|CDD|215623 PLN03190, PLN03190, aminophospholipid translocase; Provisional | Back alignment and domain information |
|---|
Score = 47.6 bits (113), Expect = 4e-05
Identities = 98/454 (21%), Positives = 160/454 (35%), Gaps = 132/454 (29%)
Query: 490 DKTGTLTSDDMEFR--GVVGLSNAELEDDMTKVPVR------------------------ 523
DKTGTLT + MEF+ + G+ ++
Sbjct: 459 DKTGTLTENKMEFQCASIWGVDYSDGRTPTQNDHAGYSVEVDGKILRPKMKVKVDPQLLE 518
Query: 524 -------TQEI---------LASCHALVFVDNKLVGDPLEKAALKGIDWSYKS-DEKAMP 566
T+E LA+C+ +V +V D +K +D+ +S DE+A+
Sbjct: 519 LSKSGKDTEEAKHVHDFFLALAACNTIV----PIVVDDTSDPTVKLMDYQGESPDEQALV 574
Query: 567 KRGGGNAVQIVQR---------------------HHFASHLKRMSVV-------VRVQEE 598
+++R H F S KRMSV+ V+V
Sbjct: 575 YAAAAYGFMLIERTSGHIVIDIHGERQRFNVLGLHEFDSDRKRMSVILGCPDKTVKV--- 631
Query: 599 FFAFVKGAPET---IQDRLTDLPSSYIETYKKYTHQ----GSRVLALAFKSLPD------ 645
FVKGA + + DR L + I + + H G R L + + L D
Sbjct: 632 ---FVKGADTSMFSVIDR--SLNMNVIRATEAHLHTYSSLGLRTLVVGMRELNDSEFEQW 686
Query: 646 ---------MTVSDARSLHR--DEVENGLTFAGFAVFNCPIREDSAKILSELKNSSQDLA 694
+ A L + VEN LT G + +++ + + L+ + +
Sbjct: 687 HFSFEAASTALIGRAALLRKVASNVENNLTILGASAIEDKLQQGVPEAIESLRTAGIKVW 746
Query: 695 MITGDQALTACYVASQVHIVTK---PVLI---------------LCPVKNGKVYEWVSPD 736
++TGD+ TA + ++T ++I L K +S +
Sbjct: 747 VLTGDKQETAISIGYSSKLLTNKMTQIIINSNSKESCRKSLEDALVMSKKLTTVSGISQN 806
Query: 737 ETEKIQYSEKEVEGLTDAHDLC--IGGDCFEMLQQTSAVLRVIPYVKVFARVAPEQKELI 794
+ V + D L + + E L Q ++ V+ + RVAP QK I
Sbjct: 807 TGGSSAAASDPVALIIDGTSLVYVLDSELEEQLFQLASKCSVV----LCCRVAPLQKAGI 862
Query: 795 LTTFKAVGR-MTLMCGDGTNDVGALKQAHVGVAL 827
+ K MTL GDG NDV ++ A VGV +
Sbjct: 863 VALVKNRTSDMTLAIGDGANDVSMIQMADVGVGI 896
|
Length = 1178 |
| >gnl|CDD|211664 TIGR01512, ATPase-IB2_Cd, heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 44.2 bits (105), Expect = 3e-04
Identities = 18/46 (39%), Positives = 23/46 (50%)
Query: 782 VFARVAPEQKELILTTFKAVGRMTLMCGDGTNDVGALKQAHVGVAL 827
V A + PE K I+ + M GDG ND AL A VG+A+
Sbjct: 405 VHAELLPEDKLEIVKELREKYGPVAMVGDGINDAPALAAADVGIAM 450
|
This model describes the P-type ATPase primarily responsible for translocating cadmium ions (and other closely-related divalent heavy metals such as cobalt, mercury, lead and zinc) across biological membranes. These transporters are found in prokaryotes and plants. Experimentally characterized members of the seed alignment include: SP|P37617 from E. coli, SP|Q10866 from Mycobacterium tuberculosis and SP|Q59998 from Synechocystis PCC6803. The cadmium P-type ATPases have been characterized as Type IB based on a phylogenetic analysis which combines the copper-translocating ATPases with the cadmium-translocating species. This model and that describing the copper-ATPases (TIGR01511) are well separated, and thus we further type the copper-ATPases as IB1 and the cadmium-ATPases as IB2. Several sequences which have not been characterized experimentally fall just below trusted cutoff for both of these models (SP|Q9CCL1 from Mycobacterium leprae, GP|13816263 from Sulfolobus solfataricus, OMNI|NTL01CJ01098 from Campylobacter jejuni, OMNI|NTL01HS01687 from Halobacterium sp., GP|6899169 from Ureaplasma urealyticum and OMNI|HP1503 from Helicobacter pylori) [Transport and binding proteins, Cations and iron carrying compounds]. Length = 536 |
| >gnl|CDD|182635 PRK10671, copA, copper exporting ATPase; Provisional | Back alignment and domain information |
|---|
Score = 44.3 bits (105), Expect = 4e-04
Identities = 20/47 (42%), Positives = 27/47 (57%)
Query: 781 KVFARVAPEQKELILTTFKAVGRMTLMCGDGTNDVGALKQAHVGVAL 827
+V A V P+ K + ++ GR M GDG ND AL QA VG+A+
Sbjct: 691 EVIAGVLPDGKAEAIKRLQSQGRQVAMVGDGINDAPALAQADVGIAM 737
|
Length = 834 |
| >gnl|CDD|236827 PRK11033, zntA, zinc/cadmium/mercury/lead-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Score = 43.4 bits (103), Expect = 7e-04
Identities = 29/78 (37%), Positives = 40/78 (51%), Gaps = 19/78 (24%)
Query: 261 RCGKWVKLAGTDLVPGDVVSI---GRSSGQTGEDKSVPADMLILGGSAIVNEAILTGEST 317
R G+ ++A DL PGDV+ + GR +PAD +L A +E+ LTGES
Sbjct: 249 RDGEREEVAIADLRPGDVIEVAAGGR----------LPADGKLLSPFASFDESALTGESI 298
Query: 318 PQWKVSIMGRETGEKLSA 335
P + R TGEK+ A
Sbjct: 299 P------VERATGEKVPA 310
|
Length = 741 |
| >gnl|CDD|226572 COG4087, COG4087, Soluble P-type ATPase [General function prediction only] | Back alignment and domain information |
|---|
Score = 40.6 bits (95), Expect = 0.001
Identities = 19/52 (36%), Positives = 29/52 (55%)
Query: 777 IPYVKVFARVAPEQKELILTTFKAVGRMTLMCGDGTNDVGALKQAHVGVALL 828
IP +VFA PE K I+ K +M G+G ND+ AL++A +G+ +
Sbjct: 68 IPVERVFAGADPEMKAKIIRELKKRYEKVVMVGNGANDILALREADLGICTI 119
|
Length = 152 |
| >gnl|CDD|236343 PRK08868, PRK08868, flagellar protein FlaG; Provisional | Back alignment and domain information |
|---|
Score = 40.2 bits (94), Expect = 0.001
Identities = 35/136 (25%), Positives = 54/136 (39%), Gaps = 42/136 (30%)
Query: 831 VPPTQSGNSSSEASKDENTKSVKSKKSKSASEAASKAMSLNSEGTSKGKASARLEANSRT 890
+ P S + + AS++ N S K+ S ++ K K + +EA
Sbjct: 10 IQPYGSNSGTKFASENGNGTSSVLVSDKTRSVSSEKV--------EKTEQELSVEAAVAM 61
Query: 891 AGNRHLTAAEMQREKLKKMMEELNE--------------EGDGRSAPIVKLGDASMASPF 936
A R E+ RE+L+KM+E++NE E GR +V + +AS
Sbjct: 62 AEQRQ----ELNREELEKMVEQMNEFVKSINKGLSFRVDEESGRD--VVTIYEAS----- 110
Query: 937 TAKHASVAPTTDIIRQ 952
T DIIRQ
Sbjct: 111 ---------TGDIIRQ 117
|
Length = 144 |
| >gnl|CDD|182635 PRK10671, copA, copper exporting ATPase; Provisional | Back alignment and domain information |
|---|
Score = 41.3 bits (97), Expect = 0.004
Identities = 60/218 (27%), Positives = 88/218 (40%), Gaps = 58/218 (26%)
Query: 294 VPADMLILGGSAIVNEAILTGESTPQWKVSIMGRETGEKLSARRDKSHVLFGGTKILQHT 353
VP D I G A ++EA+LTGE PQ K G+ + A GT ++Q
Sbjct: 355 VPVDGEITQGEAWLDEAMLTGEPIPQQKG------EGDSVHA----------GT-VVQ-- 395
Query: 354 PDKTFPLKTPDGGCLAVVLRTGFETSQGKLMRTILFSTERVTANSWE----------SGL 403
DG +V+ R S L R I + A S + S +
Sbjct: 396 ----------DG---SVLFRASAVGSHTTLSRIIRMVRQ---AQSSKPEIGQLADKISAV 439
Query: 404 FILFLVVFAVIAAGYVLKKGMEDPT-RSKYKLFLSCSLIITSVIPPELPMELSIAVNTSL 462
F+ +VV A+++A G P + Y L +I T+V+ P L +A S+
Sbjct: 440 FVPVVVVIALVSAAIWYFFG---PAPQIVYTL-----VIATTVLIIACPCALGLATPMSI 491
Query: 463 IA----LARRGIFCTEPFRIPFAGKVDMCCFDKTGTLT 496
I+ A G+ + + A +D FDKTGTLT
Sbjct: 492 ISGVGRAAEFGVLVRDADALQRASTLDTLVFDKTGTLT 529
|
Length = 834 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 1191 | |||
| KOG0209 | 1160 | consensus P-type ATPase [Inorganic ion transport a | 100.0 | |
| KOG0208 | 1140 | consensus Cation transport ATPase [Inorganic ion t | 100.0 | |
| TIGR01657 | 1054 | P-ATPase-V P-type ATPase of unknown pump specifici | 100.0 | |
| COG0474 | 917 | MgtA Cation transport ATPase [Inorganic ion transp | 100.0 | |
| TIGR01517 | 941 | ATPase-IIB_Ca plasma-membrane calcium-translocatin | 100.0 | |
| TIGR01523 | 1053 | ATPase-IID_K-Na potassium and/or sodium efflux P-t | 100.0 | |
| PRK10517 | 902 | magnesium-transporting ATPase MgtA; Provisional | 100.0 | |
| TIGR01106 | 997 | ATPase-IIC_X-K sodium or proton efflux -- potassiu | 100.0 | |
| TIGR01522 | 884 | ATPase-IIA2_Ca golgi membrane calcium-translocatin | 100.0 | |
| TIGR01524 | 867 | ATPase-IIIB_Mg magnesium-translocating P-type ATPa | 100.0 | |
| PRK15122 | 903 | magnesium-transporting ATPase; Provisional | 100.0 | |
| KOG0204 | 1034 | consensus Calcium transporting ATPase [Inorganic i | 100.0 | |
| KOG0202 | 972 | consensus Ca2+ transporting ATPase [Inorganic ion | 100.0 | |
| TIGR01647 | 755 | ATPase-IIIA_H plasma-membrane proton-efflux P-type | 100.0 | |
| TIGR01116 | 917 | ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium | 100.0 | |
| TIGR01652 | 1057 | ATPase-Plipid phospholipid-translocating P-type AT | 100.0 | |
| PLN03190 | 1178 | aminophospholipid translocase; Provisional | 100.0 | |
| KOG0203 | 1019 | consensus Na+/K+ ATPase, alpha subunit [Inorganic | 100.0 | |
| PRK14010 | 673 | potassium-transporting ATPase subunit B; Provision | 100.0 | |
| PRK01122 | 679 | potassium-transporting ATPase subunit B; Provision | 100.0 | |
| TIGR01497 | 675 | kdpB K+-transporting ATPase, B subunit. One sequen | 100.0 | |
| COG2217 | 713 | ZntA Cation transport ATPase [Inorganic ion transp | 100.0 | |
| KOG0205 | 942 | consensus Plasma membrane H+-transporting ATPase [ | 100.0 | |
| KOG0210 | 1051 | consensus P-type ATPase [Inorganic ion transport a | 100.0 | |
| TIGR01494 | 499 | ATPase_P-type ATPase, P-type (transporting), HAD s | 100.0 | |
| PRK11033 | 741 | zntA zinc/cadmium/mercury/lead-transporting ATPase | 100.0 | |
| TIGR01525 | 556 | ATPase-IB_hvy heavy metal translocating P-type ATP | 100.0 | |
| TIGR01512 | 536 | ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translo | 100.0 | |
| TIGR01511 | 562 | ATPase-IB1_Cu copper-(or silver)-translocating P-t | 100.0 | |
| KOG0207 | 951 | consensus Cation transport ATPase [Inorganic ion t | 100.0 | |
| PRK10671 | 834 | copA copper exporting ATPase; Provisional | 100.0 | |
| KOG0206 | 1151 | consensus P-type ATPase [General function predicti | 100.0 | |
| COG2216 | 681 | KdpB High-affinity K+ transport system, ATPase cha | 100.0 | |
| PF00122 | 230 | E1-E2_ATPase: E1-E2 ATPase p-type cation-transport | 99.97 | |
| PF00702 | 215 | Hydrolase: haloacid dehalogenase-like hydrolase; I | 99.9 | |
| COG4087 | 152 | Soluble P-type ATPase [General function prediction | 99.37 | |
| PF13246 | 91 | Hydrolase_like2: Putative hydrolase of sodium-pota | 99.13 | |
| TIGR02137 | 203 | HSK-PSP phosphoserine phosphatase/homoserine phosp | 98.7 | |
| PRK10513 | 270 | sugar phosphate phosphatase; Provisional | 98.49 | |
| COG0561 | 264 | Cof Predicted hydrolases of the HAD superfamily [G | 98.49 | |
| PF00690 | 69 | Cation_ATPase_N: Cation transporter/ATPase, N-term | 98.47 | |
| COG0560 | 212 | SerB Phosphoserine phosphatase [Amino acid transpo | 98.44 | |
| TIGR01487 | 215 | SPP-like sucrose-phosphate phosphatase-like hydrol | 98.4 | |
| PRK11133 | 322 | serB phosphoserine phosphatase; Provisional | 98.32 | |
| PRK15126 | 272 | thiamin pyrimidine pyrophosphate hydrolase; Provis | 98.32 | |
| PRK10976 | 266 | putative hydrolase; Provisional | 98.32 | |
| PF08282 | 254 | Hydrolase_3: haloacid dehalogenase-like hydrolase; | 98.32 | |
| PRK01158 | 230 | phosphoglycolate phosphatase; Provisional | 98.31 | |
| PLN02887 | 580 | hydrolase family protein | 98.29 | |
| TIGR01482 | 225 | SPP-subfamily Sucrose-phosphate phosphatase subfam | 98.23 | |
| PF00689 | 182 | Cation_ATPase_C: Cation transporting ATPase, C-ter | 98.19 | |
| TIGR02726 | 169 | phenyl_P_delta phenylphosphate carboxylase, delta | 98.16 | |
| smart00831 | 64 | Cation_ATPase_N Cation transporter/ATPase, N-termi | 98.14 | |
| PF12710 | 192 | HAD: haloacid dehalogenase-like hydrolase; PDB: 3P | 98.12 | |
| PRK10530 | 272 | pyridoxal phosphate (PLP) phosphatase; Provisional | 98.12 | |
| TIGR00338 | 219 | serB phosphoserine phosphatase SerB. Phosphoserine | 98.11 | |
| TIGR01491 | 201 | HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPa | 98.06 | |
| TIGR01670 | 154 | YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-pho | 98.05 | |
| TIGR01486 | 256 | HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosph | 97.98 | |
| TIGR03333 | 214 | salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl | 97.97 | |
| KOG1615 | 227 | consensus Phosphoserine phosphatase [Amino acid tr | 97.9 | |
| PRK13582 | 205 | thrH phosphoserine phosphatase; Provisional | 97.9 | |
| PRK03669 | 271 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 97.88 | |
| PRK00192 | 273 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 97.88 | |
| TIGR00099 | 256 | Cof-subfamily Cof subfamily of IIB subfamily of ha | 97.87 | |
| TIGR01489 | 188 | DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopent | 97.78 | |
| TIGR01488 | 177 | HAD-SF-IB Haloacid Dehalogenase superfamily, subfa | 97.72 | |
| PRK09484 | 183 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphata | 97.7 | |
| PRK09552 | 219 | mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosp | 97.62 | |
| TIGR01490 | 202 | HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrol | 97.58 | |
| TIGR02461 | 225 | osmo_MPG_phos mannosyl-3-phosphoglycerate phosphat | 97.48 | |
| PF12409 | 119 | P5-ATPase: P5-type ATPase cation transporter | 97.47 | |
| TIGR02463 | 221 | MPGP_rel mannosyl-3-phosphoglycerate phosphatase-r | 97.42 | |
| PLN02954 | 224 | phosphoserine phosphatase | 97.4 | |
| TIGR02471 | 236 | sucr_syn_bact_C sucrose phosphate synthase, sucros | 97.35 | |
| cd01427 | 139 | HAD_like Haloacid dehalogenase-like hydrolases. Th | 97.34 | |
| PRK14502 | 694 | bifunctional mannosyl-3-phosphoglycerate synthase/ | 97.23 | |
| COG1778 | 170 | Low specificity phosphatase (HAD superfamily) [Gen | 97.2 | |
| PLN02382 | 413 | probable sucrose-phosphatase | 97.15 | |
| KOG4383 | 1354 | consensus Uncharacterized conserved protein [Funct | 97.15 | |
| TIGR01485 | 249 | SPP_plant-cyano sucrose-6F-phosphate phosphohydrol | 97.15 | |
| COG0546 | 220 | Gph Predicted phosphatases [General function predi | 96.95 | |
| PRK13222 | 226 | phosphoglycolate phosphatase; Provisional | 96.95 | |
| PRK10187 | 266 | trehalose-6-phosphate phosphatase; Provisional | 96.91 | |
| PRK12702 | 302 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 96.81 | |
| PRK08238 | 479 | hypothetical protein; Validated | 96.62 | |
| TIGR01484 | 204 | HAD-SF-IIB HAD-superfamily hydrolase, subfamily II | 96.52 | |
| PTZ00174 | 247 | phosphomannomutase; Provisional | 96.3 | |
| TIGR01454 | 205 | AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthes | 96.29 | |
| PRK10826 | 222 | 2-deoxyglucose-6-phosphatase; Provisional | 96.19 | |
| PRK13223 | 272 | phosphoglycolate phosphatase; Provisional | 96.13 | |
| TIGR01449 | 213 | PGP_bact 2-phosphoglycolate phosphatase, prokaryot | 96.1 | |
| TIGR01548 | 197 | HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, | 96.05 | |
| TIGR01545 | 210 | YfhB_g-proteo haloacid dehalogenase superfamily, s | 95.88 | |
| TIGR01672 | 237 | AphA HAD superfamily (subfamily IIIB) phosphatase, | 95.83 | |
| PRK11590 | 211 | hypothetical protein; Provisional | 95.77 | |
| TIGR01544 | 277 | HAD-SF-IE haloacid dehalogenase superfamily, subfa | 95.72 | |
| PRK13288 | 214 | pyrophosphatase PpaX; Provisional | 95.71 | |
| PRK11009 | 237 | aphA acid phosphatase/phosphotransferase; Provisio | 95.61 | |
| PRK13226 | 229 | phosphoglycolate phosphatase; Provisional | 95.6 | |
| PRK13225 | 273 | phosphoglycolate phosphatase; Provisional | 95.27 | |
| TIGR01428 | 198 | HAD_type_II 2-haloalkanoic acid dehalogenase, type | 95.22 | |
| PRK14501 | 726 | putative bifunctional trehalose-6-phosphate syntha | 95.2 | |
| COG4359 | 220 | Uncharacterized conserved protein [Function unknow | 95.13 | |
| PRK11587 | 218 | putative phosphatase; Provisional | 95.1 | |
| PHA02530 | 300 | pseT polynucleotide kinase; Provisional | 95.03 | |
| TIGR03351 | 220 | PhnX-like phosphonatase-like hydrolase. This clade | 94.94 | |
| PLN02770 | 248 | haloacid dehalogenase-like hydrolase family protei | 94.89 | |
| TIGR01990 | 185 | bPGM beta-phosphoglucomutase. The enzyme from L. l | 94.63 | |
| PF05116 | 247 | S6PP: Sucrose-6F-phosphate phosphohydrolase; Inter | 94.61 | |
| PLN03243 | 260 | haloacid dehalogenase-like hydrolase; Provisional | 94.58 | |
| PF06888 | 234 | Put_Phosphatase: Putative Phosphatase; InterPro: I | 94.45 | |
| TIGR02009 | 185 | PGMB-YQAB-SF beta-phosphoglucomutase family hydrol | 94.04 | |
| PF13419 | 176 | HAD_2: Haloacid dehalogenase-like hydrolase; PDB: | 93.92 | |
| TIGR01422 | 253 | phosphonatase phosphonoacetaldehyde hydrolase. Thi | 93.82 | |
| TIGR01509 | 183 | HAD-SF-IA-v3 haloacid dehalogenase superfamily, su | 93.81 | |
| TIGR01662 | 132 | HAD-SF-IIIA HAD-superfamily hydrolase, subfamily I | 93.74 | |
| TIGR02253 | 221 | CTE7 HAD superfamily (subfamily IA) hydrolase, TIG | 93.45 | |
| TIGR00685 | 244 | T6PP trehalose-phosphatase. At least 18 distinct s | 93.43 | |
| PLN02575 | 381 | haloacid dehalogenase-like hydrolase | 93.34 | |
| TIGR01685 | 174 | MDP-1 magnesium-dependent phosphatase-1. This mode | 93.19 | |
| smart00775 | 157 | LNS2 LNS2 domain. This domain is found in Saccharo | 93.15 | |
| PRK13478 | 267 | phosphonoacetaldehyde hydrolase; Provisional | 93.06 | |
| PLN02580 | 384 | trehalose-phosphatase | 93.0 | |
| PLN02205 | 854 | alpha,alpha-trehalose-phosphate synthase [UDP-form | 92.97 | |
| PRK06769 | 173 | hypothetical protein; Validated | 92.62 | |
| PRK14988 | 224 | GMP/IMP nucleotidase; Provisional | 92.57 | |
| PRK06698 | 459 | bifunctional 5'-methylthioadenosine/S-adenosylhomo | 92.4 | |
| TIGR01656 | 147 | Histidinol-ppas histidinol-phosphate phosphatase f | 92.2 | |
| PLN02779 | 286 | haloacid dehalogenase-like hydrolase family protei | 92.06 | |
| TIGR01668 | 170 | YqeG_hyp_ppase HAD superfamily (subfamily IIIA) ph | 92.04 | |
| PLN02940 | 382 | riboflavin kinase | 91.91 | |
| KOG3120 | 256 | consensus Predicted haloacid dehalogenase-like hyd | 91.4 | |
| TIGR01549 | 154 | HAD-SF-IA-v1 haloacid dehalogenase superfamily, su | 91.39 | |
| PRK08942 | 181 | D,D-heptose 1,7-bisphosphate phosphatase; Validate | 90.77 | |
| PRK09449 | 224 | dUMP phosphatase; Provisional | 90.66 | |
| TIGR02252 | 203 | DREG-2 REG-2-like, HAD superfamily (subfamily IA) | 89.78 | |
| TIGR01261 | 161 | hisB_Nterm histidinol-phosphatase. This model desc | 88.85 | |
| TIGR01691 | 220 | enolase-ppase 2,3-diketo-5-methylthio-1-phosphopen | 88.8 | |
| TIGR02254 | 224 | YjjG/YfnB HAD superfamily (subfamily IA) hydrolase | 88.65 | |
| TIGR01675 | 229 | plant-AP plant acid phosphatase. This model explic | 88.63 | |
| smart00577 | 148 | CPDc catalytic domain of ctd-like phosphatases. | 88.39 | |
| PRK05446 | 354 | imidazole glycerol-phosphate dehydratase/histidino | 88.38 | |
| PLN02811 | 220 | hydrolase | 87.67 | |
| TIGR01533 | 266 | lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) famil | 87.54 | |
| TIGR01681 | 128 | HAD-SF-IIIC HAD-superfamily phosphatase, subfamily | 85.71 | |
| TIGR01459 | 242 | HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolas | 85.34 | |
| TIGR01664 | 166 | DNA-3'-Pase DNA 3'-phosphatase. The central phosph | 84.26 | |
| COG2179 | 175 | Predicted hydrolase of the HAD superfamily [Genera | 83.88 | |
| TIGR00213 | 176 | GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase | 83.65 | |
| PLN02645 | 311 | phosphoglycolate phosphatase | 83.19 | |
| TIGR02247 | 211 | HAD-1A3-hyp Epoxide hydrolase N-terminal domain-li | 83.06 | |
| PHA02597 | 197 | 30.2 hypothetical protein; Provisional | 82.6 | |
| COG3769 | 274 | Predicted hydrolase (HAD superfamily) [General fun | 82.15 | |
| TIGR01457 | 249 | HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydr | 81.98 | |
| PRK10563 | 221 | 6-phosphogluconate phosphatase; Provisional | 80.51 |
| >KOG0209 consensus P-type ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.8e-279 Score=2371.48 Aligned_cols=1131 Identities=54% Similarity=0.882 Sum_probs=1062.7
Q ss_pred ccccCCcceeEEEeeccccccccccchhhHHHHHHHHHHhhcccCc-c---chhh-hHHHHHHHHHHHHhhcccChhhhh
Q 001010 3 SFHVGGKVVDRVDLLRKKHWVWRLDVWPFAILYSGWLIAIVPSIDF-G---DAAI-VLGGLVAFHILVWLFTAWSVDFKC 77 (1191)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~pf~~~~~~~~~~~~~~~~~-~---~~~~-~~~~~~~~~~l~~l~~~W~~~~~~ 77 (1191)
...|+ |.|+.+.||++||+.+|+|||||+++|+.|++.|++.+|. + +|++ +++++.++|+|++|+++||++++|
T Consensus 3 ~~~v~-~~v~~~~l~~~~~l~~~lyV~Pf~~l~a~~~~~~~~~~~~~~~~~~~t~i~~g~l~~~hilvlL~~~Wsv~v~~ 81 (1160)
T KOG0209|consen 3 KFRVD-PLVEMVILYVKRPLHKRLYVWPFAILYAMWLTLWYPQADFYEEFRELTFIALGALSAIHILVLLFTFWSVKVRC 81 (1160)
T ss_pred ccccc-chhhhheeeeeccccccccccchHHHHHHHHHHhhhccccceeeeeeeEEEecHHHHHHHHHHHHHhhchheeE
Confidence 34555 9999999999999999999999999999999999998884 3 3444 588999999999999999999999
Q ss_pred eeeeccCCCcCCCcEEEEEeCCCCCceeeEEeeeeccccccCCCCCCceEEEEEEeEEEEEECCCCceeeCCCChhhhHH
Q 001010 78 FAHYSKINDIHLADACKITPVKFCGSKEVVPLQFWKQSAVSSTPVDEDEICFDFRKQHFIYSREKGTFCKLPYPTKETFG 157 (1191)
Q Consensus 78 ~~~~~~~~~~~~a~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~y~~~~~~~~f~~~~~~~~~~~~ 157 (1191)
+++|++.+++++|+|++|+|++|+|++++|||++... +++..++||+|||.||+|+++++.|.++.+|.++++.
T Consensus 82 ~~~~~~~~~v~~at~i~v~pt~nnGs~~lv~l~~~~~------~~~~~q~~F~Fqk~ry~~~~e~~~F~~~~fp~~~~~g 155 (1160)
T KOG0209|consen 82 FFTCSKTKDVSKATHILVTPTPNNGSSELVPLHRGVL------EDGMEQYFFEFQKKRYLYDEEKGKFSRLTFPTDEPFG 155 (1160)
T ss_pred EEeeccccCcccccEEEEEccCCCCCcceeEeeeccc------CCCceEEEEEEEEeeEEEcccccceeccccCcCCcch
Confidence 9999999999999999999999999999999997643 4567889999999999999999999999999999999
Q ss_pred hhhhcCCCCCHHHHHHHHhccCCCccCCCCCcHHHHHHHHhhhHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHH
Q 001010 158 YYLKCTGHSTEAKIAVATEKWGRNVFEYPQPTFQKLMKENCMEPFFVFQVFCVGLWCLDEYWYYSLFTLFMLFMFESTMA 237 (1191)
Q Consensus 158 ~~~~~~g~ls~~e~~~~~~~yG~N~i~i~~~s~~~ll~~~~~~pf~vfqi~~v~lw~l~~y~~ysl~~l~m~vv~~~~~~ 237 (1191)
.|++++|...+++++..+.+||+|++++|+|+|.++|+|+..+||||||+||++|||+||||||++|++||++.+|++.+
T Consensus 156 ~~~k~~G~~~~~~i~~a~~~~G~N~fdi~vPtF~eLFkE~A~aPfFVFQVFcvgLWCLDeyWYySlFtLfMli~fE~tlV 235 (1160)
T KOG0209|consen 156 YFQKSTGHEEESEIKLAKHKYGKNKFDIVVPTFSELFKEHAVAPFFVFQVFCVGLWCLDEYWYYSLFTLFMLIAFEATLV 235 (1160)
T ss_pred hhhhccCcchHHHHHHHHHHhcCCccccCCccHHHHHHHhccCceeeHhHHhHHHHHhHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999888889988899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhccCCceEEEEECCEEEEEecCCCCCCcEEEEcCCCCCCCCCceeeeeEEEEecceeeecccccCCCC
Q 001010 238 KSRLKTLTEIRRVRVDNQTIMVHRCGKWVKLAGTDLVPGDVVSIGRSSGQTGEDKSVPADMLILGGSAIVNEAILTGEST 317 (1191)
Q Consensus 238 ~~~~r~~~~l~~m~~~~~~v~V~R~g~~~~I~s~eLvpGDIV~l~~g~gd~~~~~~VPaD~iLl~G~~~VdES~LTGES~ 317 (1191)
+||.|+++++|+|+++|+.+.|+|+++|+.+.++||+|||+|+|.+| +|+..||||.+||+|+|+||||||||||+
T Consensus 236 ~Qrm~~lse~R~Mg~kpy~I~v~R~kKW~~l~seeLlPgDvVSI~r~----~ed~~vPCDllLL~GsciVnEaMLtGESv 311 (1160)
T KOG0209|consen 236 KQRMRTLSEFRTMGNKPYTINVYRNKKWVKLMSEELLPGDVVSIGRG----AEDSHVPCDLLLLRGSCIVNEAMLTGESV 311 (1160)
T ss_pred HHHHHHHHHHHhcCCCceEEEEEecCcceeccccccCCCceEEeccC----cccCcCCceEEEEecceeechhhhcCCCc
Confidence 99999999999999999999999999999999999999999999998 46689999999999999999999999999
Q ss_pred ceecccccCCCCccccccccC-CCeeEeeceEEeecCCCCCCCCCCCCCcEEEEEEEecccchhhHHHHHhccccccccc
Q 001010 318 PQWKVSIMGRETGEKLSARRD-KSHVLFGGTKILQHTPDKTFPLKTPDGGCLAVVLRTGFETSQGKLMRTILFSTERVTA 396 (1191)
Q Consensus 318 Pv~K~~i~~~~~~~~~~~~~~-k~~~lfaGT~vlq~~~~~~~~~~~~~g~~~~vV~~TG~~T~~Gkl~r~i~~~~~~~~~ 396 (1191)
|++|++++.++.++.++.+++ |.|+||+||+++||+++....+++|||+|+|+|+||||||+||+|+|+|+++.+|++.
T Consensus 312 Pl~KE~Ie~~~~d~~ld~~~d~k~hVlfGGTkivQht~p~~~slk~pDggc~a~VlrTGFeTSQGkLvRtilf~aervTa 391 (1160)
T KOG0209|consen 312 PLMKESIELRDSDDILDIDRDDKLHVLFGGTKIVQHTPPKKASLKTPDGGCVAYVLRTGFETSQGKLVRTILFSAERVTA 391 (1160)
T ss_pred cccccccccCChhhhcccccccceEEEEcCceEEEecCCccccccCCCCCeEEEEEeccccccCCceeeeEEecceeeee
Confidence 999999999999999999886 9999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhHHHHHHHHHHHHHHhhheeeeecccCCCcchhHHHHHHHHhhhhccCCCcchHHHHHHHHHHHHHHhcCccccCCC
Q 001010 397 NSWESGLFILFLVVFAVIAAGYVLKKGMEDPTRSKYKLFLSCSLIITSVIPPELPMELSIAVNTSLIALARRGIFCTEPF 476 (1191)
Q Consensus 397 ~~~~~~~fi~~lli~aii~~~~~~~~~~~~~~~~~~~~~l~~i~iit~~vP~~LP~~lslav~~s~~~L~k~~I~~~~p~ 476 (1191)
||+|++.||+||++||++|++|+|..|..+++|+.+++++.|++|+|++|||+|||++++|++.|+.+|+|.+|||++|+
T Consensus 392 Nn~Etf~FILFLlVFAiaAa~Yvwv~Gskd~~RsrYKL~LeC~LIlTSVvPpELPmELSmAVNsSL~ALak~~vyCTEPF 471 (1160)
T KOG0209|consen 392 NNRETFIFILFLLVFAIAAAGYVWVEGSKDPTRSRYKLFLECTLILTSVVPPELPMELSMAVNSSLIALAKLGVYCTEPF 471 (1160)
T ss_pred ccHHHHHHHHHHHHHHHHhhheEEEecccCcchhhhheeeeeeEEEeccCCCCCchhhhHHHHHHHHHHHHhceeecCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccCCccEEEecccccccCCceEEEEEeecCC-CccccccCCCchHHHHHHhhccceEEeCCcccCChHHHHHHhccc
Q 001010 477 RIPFAGKVDMCCFDKTGTLTSDDMEFRGVVGLSN-AELEDDMTKVPVRTQEILASCHALVFVDNKLVGDPLEKAALKGID 555 (1191)
Q Consensus 477 ~i~~~G~vd~icfDKTGTLT~~~l~v~gv~~~~~-~~~~~~~~~~~~~~~~~la~chsl~~~~~~~~GdPle~all~~~~ 555 (1191)
|||++|+||+||||||||||++.|.|+|+.+.+. .....+.++.|.++.+++|+||+++..+++++|||+|+|++++++
T Consensus 472 RIPfAGkvdvCCFDKTGTLT~d~lvv~Gvag~~~~~~~~~~~s~~p~~t~~vlAscHsLv~le~~lVGDPlEKA~l~~v~ 551 (1160)
T KOG0209|consen 472 RIPFAGKVDVCCFDKTGTLTEDDLVVEGVAGLSADEGALTPASKAPNETVLVLASCHSLVLLEDKLVGDPLEKATLEAVG 551 (1160)
T ss_pred ccccCCceeEEEecCCCccccccEEEEecccccCCcccccchhhCCchHHHHHHHHHHHHHhcCcccCChHHHHHHHhcC
Confidence 9999999999999999999999999999998554 222334677888999999999999999999999999999999999
Q ss_pred ccccCCCccccCCCCCCcccEEEEecCCCCCCcEEEEEEeCC-----eEEEEEeCcHHHHHHhccCChHHHHHHHHHHHH
Q 001010 556 WSYKSDEKAMPKRGGGNAVQIVQRHHFASHLKRMSVVVRVQE-----EFFAFVKGAPETIQDRLTDLPSSYIETYKKYTH 630 (1191)
Q Consensus 556 ~~~~~~~~~~~~~~~~~~~~il~~~~Fss~~krmsvvv~~~~-----~~~~~~KGapE~I~~~~~~~p~~~~~~~~~~a~ 630 (1191)
|+++.++...+.++....++|++||+|+|++|||||++..++ ++++.+|||||+|++++.++|++|+++|++|++
T Consensus 552 W~~~k~~~v~p~~~~~~~lkI~~ryhFsSaLKRmsvva~~~~~g~s~k~~~aVKGAPEvi~~ml~dvP~dY~~iYk~ytR 631 (1160)
T KOG0209|consen 552 WNLEKKNSVCPREGNGKKLKIIQRYHFSSALKRMSVVASHQGPGSSEKYFVAVKGAPEVIQEMLRDVPKDYDEIYKRYTR 631 (1160)
T ss_pred cccccCcccCCCcCCCcccchhhhhhHHHHHHHHHhhhhcccCCCceEEEEEecCCHHHHHHHHHhCchhHHHHHHHHhh
Confidence 999999988888887788999999999999999999999875 799999999999999999999999999999999
Q ss_pred hcCeeeeEEEEeCCCCChhhhhhccccccccCeEEeeeecccCcCCchhHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHH
Q 001010 631 QGSRVLALAFKSLPDMTVSDARSLHRDEVENGLTFAGFAVFNCPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQ 710 (1191)
Q Consensus 631 ~G~RVLalA~k~l~~~~~~~~~~~~r~~~E~dL~flG~l~~~d~lK~da~~~I~~L~~agi~vvMiTGDn~~TA~~VA~~ 710 (1191)
+|+||||+|||+++....++.++++|+++|+||+|+||++|.||+|+|++++|++|++++|+|+|||||||+||+|||++
T Consensus 632 ~GsRVLALg~K~l~~~~~~q~rd~~Re~vEsdLtFaGFlif~CPlK~Ds~~~I~el~~SSH~vvMITGDnpLTAchVak~ 711 (1160)
T KOG0209|consen 632 QGSRVLALGYKPLGDMMVSQVRDLKREDVESDLTFAGFLIFSCPLKPDSKKTIKELNNSSHRVVMITGDNPLTACHVAKE 711 (1160)
T ss_pred ccceEEEEecccccccchhhhhhhhhhhhhhcceeeeeEEEeCCCCccHHHHHHHHhccCceEEEEeCCCccchheehhe
Confidence 99999999999999888889999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCcEEEe--ecCCCceeeecCCCccccccCChHHHhc-ccccceEEEechhhhhhcchHHHHhhcCcceEEeecC
Q 001010 711 VHIVTKPVLILC--PVKNGKVYEWVSPDETEKIQYSEKEVEG-LTDAHDLCIGGDCFEMLQQTSAVLRVIPYVKVFARVA 787 (1191)
Q Consensus 711 ~gI~~~~~~il~--~~~~~~~~~w~~~d~~~~~~~~~~~~~~-~~~~~~l~itG~~l~~l~~~~~~~~~l~~~~VfAR~s 787 (1191)
+||+.++..+++ +.+++..+.|+++|++..+|+++..... +.+.|++|+||++++++..++.+.+++++++||||++
T Consensus 712 v~iv~k~~~vl~~~~~~~~~~~~w~s~d~t~~lp~~p~~~~~~l~~~~dlcitG~~l~~l~~~~~l~~l~~hv~VfARva 791 (1160)
T KOG0209|consen 712 VGIVEKPTLVLDLPEEGDGNQLEWVSVDGTIVLPLKPGKKKTLLAETHDLCITGSALDHLQATDQLRRLIPHVWVFARVA 791 (1160)
T ss_pred eeeeccCceeeccCccCCCceeeEecCCCceeecCCCCccchhhhhhhhhhcchhHHHHHhhhHHHHHhhhheeEEEeeC
Confidence 999988777776 3456778999999999999998866543 8889999999999999999999999999999999999
Q ss_pred hhhHHHHHHHHhHcCCEEEEEcCCccCHHHHhhCCceEEeccCCCccccccCCccc----ccccchhhhhccccccchhh
Q 001010 788 PEQKELILTTFKAVGRMTLMCGDGTNDVGALKQAHVGVALLNAVPPTQSGNSSSEA----SKDENTKSVKSKKSKSASEA 863 (1191)
Q Consensus 788 P~qK~~iV~~Lq~~g~~V~m~GDG~ND~~ALk~AdVGIAl~~~~~e~~~~asdi~~----~~~~~~~~~~~~~~~~~~~~ 863 (1191)
|.||+.+|+.||+.||.|+|||||+||+||||+||||||+.++..|..++.++-.. ....++.+...|+++|+|++
T Consensus 792 P~QKE~ii~tlK~~Gy~TLMCGDGTNDVGALK~AhVGVALL~~~~e~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~ 871 (1160)
T KOG0209|consen 792 PKQKEFIITTLKKLGYVTLMCGDGTNDVGALKQAHVGVALLNNPEESKKDKEKRRKKKLKLEPAKQTIAANRQNSPRPPV 871 (1160)
T ss_pred hhhHHHHHHHHHhcCeEEEEecCCCcchhhhhhcccceehhcCChhhhhHHhhhhhhccccCchhhHHHhhhccCCCCCC
Confidence 99999999999999999999999999999999999999999998875443332111 11244566778888888877
Q ss_pred hhhhhccCCCCCCccchhhhhhhcccccccccchHHHHHHHHHHHHHHHHhhcCCCCCCCccccCcccccCCCccCcCCc
Q 001010 864 ASKAMSLNSEGTSKGKASARLEANSRTAGNRHLTAAEMQREKLKKMMEELNEEGDGRSAPIVKLGDASMASPFTAKHASV 943 (1191)
Q Consensus 864 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~klgdASiaaPFtsk~~~i 943 (1191)
|++.. +....+.+++++++++++|+++.. .|.+||||||||||||||.+||
T Consensus 872 p~~~~--------------------------~~~~~~~~~e~l~~i~kdlee~~~---~p~vKLGDASiAAPFTsK~asv 922 (1160)
T KOG0209|consen 872 PPAER--------------------------HNPHAEKTRERLKKILKDLEEDKG---DPLVKLGDASIAAPFTSKLASV 922 (1160)
T ss_pred CCccc--------------------------cChhHHHHHHHHHHHHHHHhhccc---CccccccccccccccccccchH
Confidence 65422 223445566788999999987653 4999999999999999999999
Q ss_pred cchhhhhhccchHHHHHHhhhHHHHHHHHHHHHHHHHhhhccccccchHHHHHhHHHHHHHHHhhccCCCCccccCCCCC
Q 001010 944 APTTDIIRQGRSTLVTTLQMFKILGLNCLATAYVLSVMYLDGVKLGDVQATISGVFTAAFFLFISHARPLPTLSAARPHP 1023 (1191)
Q Consensus 944 ~~v~~iir~GR~~Lvtt~~~fk~l~l~~li~~~s~svly~~g~~~~d~Q~~~~~~l~~~~~~~~s~~~p~~~Ls~~rP~~ 1023 (1191)
+||+|||||||||||||+||||||||||||+|||+||||++|+||||.|+|++|+++++||+||||+||+++|||+||.+
T Consensus 923 ~~v~~IIrQGRctLVtTlQMfKILALN~LisAYslSvlyldGVKfgD~QaTisGlLla~cFlfISrskPLetLSkeRP~~ 1002 (1160)
T KOG0209|consen 923 SSVTHIIRQGRCTLVTTLQMFKILALNCLISAYSLSVLYLDGVKFGDTQATISGLLLAACFLFISRSKPLETLSKERPLP 1002 (1160)
T ss_pred HHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHHHhhhcCceecchhHhHHHHHHHHHHhheecCCchhhHhhcCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccchhhHHHHHHHHHHHHHHHHHHhhhhcccCCCC-CCCCCCCCCCcccchhhhHHHHHHHHhhheeEecCCCcccccc
Q 001010 1024 NIFCSYVFLSLMGQFAIHLFFLISSVKEAEKYMPDE-CIEPDADFHPNLVNTVSYMVNMMIQVATFAVNYMGHPFNQSIS 1102 (1191)
Q Consensus 1024 ~if~~~~~~si~~Q~~i~~~~l~~~~~~~~~~~~~~-~~~~~~~f~p~~~nt~vfl~~~~~~i~~~~v~~~g~Pf~~~~~ 1102 (1191)
||||.|+++|+++||++|+++++|++..++.++|+. .+|++.+|+||++||++|++++.||++||+|||+|+||||+++
T Consensus 1003 nIFN~Y~i~svl~QFaVH~~tLvYi~~~a~~~~p~~~~vdl~~~F~PsllNt~vyiisl~~QvsTFAVNY~G~PF~Esl~ 1082 (1160)
T KOG0209|consen 1003 NIFNVYIILSVLLQFAVHIATLVYITGEAYKLEPPEEKVDLEEKFSPSLLNTTVYIISLAQQVSTFAVNYQGRPFRESLR 1082 (1160)
T ss_pred CcchHHHHHHHHHHHHHHHHHhhhhHHHHHhcCCcccccChhcccChhhhhhHHHHHHHHHHHHHhhhhccCcchhhhhh
Confidence 999999999999999999999999999999999875 6999999999999999999999999999999999999999999
Q ss_pred cchhHHHHHHHHHHHHHHhhcccchhhhhccceeeCChhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCc
Q 001010 1103 ENKPFMYALMGAVGFFTVITSDLLRSLNDWLKLVPLPSGLRDKLLIWAGLMFLGCYSWERFLRWAFPGKVP 1173 (1191)
Q Consensus 1103 ~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~lv~~p~~~~~~l~~~~~~~~~~~~~~e~~~~~~~~~~~~ 1173 (1191)
|||+|+|+|++..++.+.+++++.|++|+.|++|+||.+||.+|++++++|+++||++||+|+++|+++.+
T Consensus 1083 eNK~l~y~ll~~~~~~~~l~tg~~peLn~~~~lV~mp~~fk~~ll~~l~lD~v~c~~~er~~~f~f~~~k~ 1153 (1160)
T KOG0209|consen 1083 ENKGLLYGLLGSAGVIIALATGSSPELNEKFELVDMPQDFKIKLLAVLVLDFVLCYLVERVLKFFFGDHKP 1153 (1160)
T ss_pred hccchHHHHHHHHHHHHHHHhccChhHHhheeeecccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999986554
|
|
| >KOG0208 consensus Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-181 Score=1593.89 Aligned_cols=995 Identities=28% Similarity=0.430 Sum_probs=841.9
Q ss_pred hHHHHHHHHHHHHhhcccChhhhheeeeccCCCcCCCcEEEEEeCCCCCceeeEEeeeeccccccC-----CCCCCceEE
Q 001010 54 VLGGLVAFHILVWLFTAWSVDFKCFAHYSKINDIHLADACKITPVKFCGSKEVVPLQFWKQSAVSS-----TPVDEDEIC 128 (1191)
Q Consensus 54 ~~~~~~~~~~l~~l~~~W~~~~~~~~~~~~~~~~~~a~~~~v~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~ 128 (1191)
+-+.-++..|+++|+++|.++|+.++.+.+| ++++|++|.|.. .+|..++.++.+.......+ ..+....++
T Consensus 42 y~v~~vLTlG~~~Li~rWlP~~~vk~~~~Pc-sl~~ae~V~Ie~--~~g~~~~~~v~~~~~~~~~~~~~~~~~~~~~~r~ 118 (1140)
T KOG0208|consen 42 YNVLCVLTLGLFHLIFRWLPKWKVKLRGSPC-SLADAEWVVIED--QNGTSEIVDVLAQSSEEPLSTSRYSQEGVGRVRD 118 (1140)
T ss_pred hHHHHHHHhhHHHHHHhhcchheEEEEeccc-CcccccEEEEEc--CCCcEEehhhhhhhccCCccccchhhcccchhhh
Confidence 3444556788999999999999999999998 689999999986 47899998887644221110 123345689
Q ss_pred EEEEeEEEEEECC-CCceeeCCCChh--h---hHHhhhhcCCCCCHHHHHHHHhccCCCccCCCCCcHHHHHHHHhhhHH
Q 001010 129 FDFRKQHFIYSRE-KGTFCKLPYPTK--E---TFGYYLKCTGHSTEAKIAVATEKWGRNVFEYPQPTFQKLMKENCMEPF 202 (1191)
Q Consensus 129 f~~~~~~y~~~~~-~~~f~~~~~~~~--~---~~~~~~~~~g~ls~~e~~~~~~~yG~N~i~i~~~s~~~ll~~~~~~pf 202 (1191)
|.|++.+|.|.++ +..|.+. +..+ . .++.......|++.+++..|+..||+|.+..|.+++++++.+|+++||
T Consensus 119 ~~~kkl~~~~~~~~~~~w~~~-~~~~~~~~~~~~~~~~~~~~gL~~~~~~~r~~iyG~N~i~l~ik~i~~iLv~EvL~Pf 197 (1140)
T KOG0208|consen 119 FAYKKLEYDPVSELRFIWPPF-QKAEFRDDPRWYSTESYVSNGLERQEIIDRRIIYGRNVISLPIKSISQILVKEVLNPF 197 (1140)
T ss_pred hhhhcceeccccccceeeccc-cchhhccchhhhccceeccCCccHHHHHhHHhhcCCceeeeecccHHHHHHHhccchH
Confidence 9999999999886 5455441 1111 1 122222234677888999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCceEEEEECCEEEEEecCCCCCCcEEEEc
Q 001010 203 FVFQVFCVGLWCLDEYWYYSLFTLFMLFMFESTMAKSRLKTLTEIRRVRVDNQTIMVHRCGKWVKLAGTDLVPGDVVSIG 282 (1191)
Q Consensus 203 ~vfqi~~v~lw~l~~y~~ysl~~l~m~vv~~~~~~~~~~r~~~~l~~m~~~~~~v~V~R~g~~~~I~s~eLvpGDIV~l~ 282 (1191)
|+||+||+++|..|+|+|||.+++++.+......+++.++...++|+|...+..|+|+|||.|++|+|+|||||||+.+.
T Consensus 198 YlFQ~fSv~lW~~d~Y~~YA~cI~iisv~Si~~sv~e~r~qs~rlr~mv~~~~~V~V~R~g~~~ti~S~eLVPGDil~i~ 277 (1140)
T KOG0208|consen 198 YLFQAFSVALWLADSYYYYAFCIVIISVYSIVLSVYETRKQSIRLRSMVKFTCPVTVIRDGFWETVDSSELVPGDILYIP 277 (1140)
T ss_pred HHHHhHHhhhhhcccchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEECCEEEEEeccccccccEEEEC
Confidence 99999999999999999999999999998888899999999999999999889999999999999999999999999999
Q ss_pred CCCCCCCCCceeeeeEEEEecceeeecccccCCCCceecccccCCCC---ccccccccCCCeeEeeceEEeecCCCCCCC
Q 001010 283 RSSGQTGEDKSVPADMLILGGSAIVNEAILTGESTPQWKVSIMGRET---GEKLSARRDKSHVLFGGTKILQHTPDKTFP 359 (1191)
Q Consensus 283 ~g~gd~~~~~~VPaD~iLl~G~~~VdES~LTGES~Pv~K~~i~~~~~---~~~~~~~~~k~~~lfaGT~vlq~~~~~~~~ 359 (1191)
++ +..+|||++|++|+|+||||||||||+|+.|.|++.... ......+.+++|++|+||+++|++.+
T Consensus 278 ~~------~~~~PcDa~Li~g~civNEsmLTGESVPv~K~~l~~~~~~~~~~~~~~~~~~rh~lfcGT~vlq~r~~---- 347 (1140)
T KOG0208|consen 278 PP------GKIMPCDALLISGDCIVNESMLTGESVPVTKTPLPMGTDSLDSITISMSTNSRHTLFCGTKVLQARAY---- 347 (1140)
T ss_pred CC------CeEeecceEEEeCcEEeecccccCCcccccccCCccccccCcCeeechhhcCcceeeccceEEEeecC----
Confidence 74 279999999999999999999999999999999973222 22444556899999999999999864
Q ss_pred CCCCCCcEEEEEEEecccchhhHHHHHhccccccccchhhhHHHHHHHHHHHHHHhhheeeeecccCCCcchhHHHHHHH
Q 001010 360 LKTPDGGCLAVVLRTGFETSQGKLMRTILFSTERVTANSWESGLFILFLVVFAVIAAGYVLKKGMEDPTRSKYKLFLSCS 439 (1191)
Q Consensus 360 ~~~~~g~~~~vV~~TG~~T~~Gkl~r~i~~~~~~~~~~~~~~~~fi~~lli~aii~~~~~~~~~~~~~~~~~~~~~l~~i 439 (1191)
+++.++|+|+||||+|.+|+|+|+|+||++..+.+++++++|+++|.++|+++++|..+.... .+.+....+++++
T Consensus 348 ---~g~~v~a~V~RTGF~T~KGqLVRsilyPkP~~fkfyrds~~fi~~l~~ia~~gfiy~~i~l~~-~g~~~~~iiirsL 423 (1140)
T KOG0208|consen 348 ---LGGPVLAMVLRTGFSTTKGQLVRSILYPKPVNFKFYRDSFKFILFLVIIALIGFIYTAIVLNL-LGVPLKTIIIRSL 423 (1140)
T ss_pred ---CCCceEEEEEeccccccccHHHHhhcCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHhHhHHH-cCCCHHHHhhhhh
Confidence 367899999999999999999999999999999999999999999999999988876543322 2445667899999
Q ss_pred HhhhhccCCCcchHHHHHHHHHHHHHHhcCccccCCCcccccCCccEEEecccccccCCceEEEEEeecCCC-----c--
Q 001010 440 LIITSVIPPELPMELSIAVNTSLIALARRGIFCTEPFRIPFAGKVDMCCFDKTGTLTSDDMEFRGVVGLSNA-----E-- 512 (1191)
Q Consensus 440 ~iit~~vP~~LP~~lslav~~s~~~L~k~~I~~~~p~~i~~~G~vd~icfDKTGTLT~~~l~v~gv~~~~~~-----~-- 512 (1191)
+++|++||||||++++++..++..||+|+||||++|.||+.+|++|++|||||||||+|++++.|+.+..+. .
T Consensus 424 DliTi~VPPALPAaltvG~~~a~~RLkkk~IfCisP~rIn~~G~i~~~cFDKTGTLTEdGLDl~gv~~~~~~~~~~~~~~ 503 (1140)
T KOG0208|consen 424 DLITIVVPPALPAALTVGIIYAQSRLKKKGIFCISPQRINLCGKLNLVCFDKTGTLTEDGLDLWGVVPVERNVDDGPELK 503 (1140)
T ss_pred cEEEEecCCCchhhhhHHHHHHHHHHHhcCeEEcCccceeecceeeEEEEcCCCcccccceeEEEEEeccccccccchhh
Confidence 999999999999999999999999999999999999999999999999999999999999999999975431 0
Q ss_pred ------------cccccCCCc-hHHHHHHhhccceEEeCCcccCChHHHHHHhcccccccCCC---cc-------c----
Q 001010 513 ------------LEDDMTKVP-VRTQEILASCHALVFVDNKLVGDPLEKAALKGIDWSYKSDE---KA-------M---- 565 (1191)
Q Consensus 513 ------------~~~~~~~~~-~~~~~~la~chsl~~~~~~~~GdPle~all~~~~~~~~~~~---~~-------~---- 565 (1191)
+..+....+ ......+|+|||+...+|.++|||+|..|+++.+|.+.+.+ .. .
T Consensus 504 ~~~~~~~~~~~~l~~~~~~~~~~~~~~a~atCHSL~~v~g~l~GDPLdlkmfe~t~w~~ee~~~~~~~~~~~~~~~p~v~ 583 (1140)
T KOG0208|consen 504 VVTEDSLQLFYKLSLRSSSLPMGNLVAAMATCHSLTLVDGTLVGDPLDLKMFESTGWVYEEADIEDEATREFNTLIPTVV 583 (1140)
T ss_pred hhhhhhccceeeccccccCCchHHHHHHHhhhceeEEeCCeeccCceeeeeeeccceEEEeccccchhhhhhCCccCCEe
Confidence 001111122 24567899999999999999999999999999999985521 10 0
Q ss_pred -cCC----C----CCCcccEEEEecCCCCCCcEEEEEEeC--CeEEEEEeCcHHHHHHhc--cCChHHHHHHHHHHHHhc
Q 001010 566 -PKR----G----GGNAVQIVQRHHFASHLKRMSVVVRVQ--EEFFAFVKGAPETIQDRL--TDLPSSYIETYKKYTHQG 632 (1191)
Q Consensus 566 -~~~----~----~~~~~~il~~~~Fss~~krmsvvv~~~--~~~~~~~KGapE~I~~~~--~~~p~~~~~~~~~~a~~G 632 (1191)
+.. . +...+.|+++|||+|++||||||+... ++.++|+|||||.|.+.| .++|++|.+++++|+.+|
T Consensus 584 ~p~~~~~~~~t~~~~~~~si~k~feF~S~LrRMSVIv~~~~e~~~~~ftKGaPE~I~~ic~p~tvP~dy~evl~~Yt~~G 663 (1140)
T KOG0208|consen 584 RPPENAFNQSTECGEGEISIVKQFEFSSALRRMSVIVSTGGEDKMMVFTKGAPESIAEICKPETVPADYQEVLKEYTHQG 663 (1140)
T ss_pred CCCcccccCCCcCCCcceEEEEecccchhhheEEEEEecCCCCceEeeccCCHHHHHHhcCcccCCccHHHHHHHHHhCC
Confidence 100 0 112589999999999999999999997 479999999999999999 578999999999999999
Q ss_pred CeeeeEEEEeCCCCChhhhhhccccccccCeEEeeeecccCcCCchhHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcC
Q 001010 633 SRVLALAFKSLPDMTVSDARSLHRDEVENGLTFAGFAVFNCPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVH 712 (1191)
Q Consensus 633 ~RVLalA~k~l~~~~~~~~~~~~r~~~E~dL~flG~l~~~d~lK~da~~~I~~L~~agi~vvMiTGDn~~TA~~VA~~~g 712 (1191)
+||||+|+|.++...+++.+.++|+.+|+||+|+|+++|+|+||++++.+|++|++|+||++|+||||.+||+.|||+||
T Consensus 664 fRVIAlA~K~L~~~~~~~~~~~~Rd~vEs~l~FlGLiVmeNkLK~~T~~VI~eL~~AnIRtVMcTGDNllTaisVakeCg 743 (1140)
T KOG0208|consen 664 FRVIALASKELETSTLQKAQKLSRDTVESNLEFLGLIVMENKLKEETKRVIDELNRANIRTVMCTGDNLLTAISVAKECG 743 (1140)
T ss_pred eEEEEEecCccCcchHHHHhhccHhhhhccceeeEEEEeecccccccHHHHHHHHhhcceEEEEcCCchheeeehhhccc
Confidence 99999999999877788899999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCC-cEEEee-----cCCCceeeecCCCccccccC----ChH--H----Hh-cccccceEEEechhhhhhcch--HHH
Q 001010 713 IVTKP-VLILCP-----VKNGKVYEWVSPDETEKIQY----SEK--E----VE-GLTDAHDLCIGGDCFEMLQQT--SAV 773 (1191)
Q Consensus 713 I~~~~-~~il~~-----~~~~~~~~w~~~d~~~~~~~----~~~--~----~~-~~~~~~~l~itG~~l~~l~~~--~~~ 773 (1191)
|+... .+++.+ .+....++|..+++.+.... +++ + .+ ....+|++|++|+.++.+..+ +.+
T Consensus 744 mi~p~~~v~~~~~~~~~~~~~~~i~w~~ve~~~~~~~~~~~~~~~~~~~~~~d~~~~~~yhlA~sG~~f~~i~~~~~~l~ 823 (1140)
T KOG0208|consen 744 MIEPQVKVIIPELEPPEDDSIAQIVWLCVESQTQFLDPKEPDPDLASVKLSLDVLSEKDYHLAMSGKTFQVILEHFPELV 823 (1140)
T ss_pred ccCCCCeEEEEeccCCccCCCceeEEEEccCccccCCCCccCccccCCccChhhhccceeEEEecCchhHHHHhhcHHHH
Confidence 99554 444432 12335688988775443311 110 0 11 123579999999999999854 567
Q ss_pred HhhcCcceEEeecChhhHHHHHHHHhHcCCEEEEEcCCccCHHHHhhCCceEEeccCCCccccccCCcccccccchhhhh
Q 001010 774 LRVIPYVKVFARVAPEQKELILTTFKAVGRMTLMCGDGTNDVGALKQAHVGVALLNAVPPTQSGNSSSEASKDENTKSVK 853 (1191)
Q Consensus 774 ~~~l~~~~VfAR~sP~qK~~iV~~Lq~~g~~V~m~GDG~ND~~ALk~AdVGIAl~~~~~e~~~~asdi~~~~~~~~~~~~ 853 (1191)
.+++.++.|||||+|+||.++|+.||+.||.|+|||||+|||+|||+||||||+++
T Consensus 824 ~~Il~~~~VfARMsP~qK~~Lie~lQkl~y~VgfCGDGANDCgALKaAdvGISLSe------------------------ 879 (1140)
T KOG0208|consen 824 PKILLKGTVFARMSPDQKAELIEALQKLGYKVGFCGDGANDCGALKAADVGISLSE------------------------ 879 (1140)
T ss_pred HHHHhcCeEEeecCchhHHHHHHHHHhcCcEEEecCCCcchhhhhhhcccCcchhh------------------------
Confidence 88899999999999999999999999999999999999999999999999999993
Q ss_pred ccccccchhhhhhhhccCCCCCCccchhhhhhhcccccccccchHHHHHHHHHHHHHHHHhhcCCCCCCCccccCccccc
Q 001010 854 SKKSKSASEAASKAMSLNSEGTSKGKASARLEANSRTAGNRHLTAAEMQREKLKKMMEELNEEGDGRSAPIVKLGDASMA 933 (1191)
Q Consensus 854 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~klgdASia 933 (1191)
+|||+|
T Consensus 880 --------------------------------------------------------------------------aEASvA 885 (1140)
T KOG0208|consen 880 --------------------------------------------------------------------------AEASVA 885 (1140)
T ss_pred --------------------------------------------------------------------------hhHhhc
Confidence 589999
Q ss_pred CCCccCcCCccchhhhhhccchHHHHHHhhhHHHHHHHHHHHHHHHHhhhccccccchHHHHHhHHHH-HHHHHhhccCC
Q 001010 934 SPFTAKHASVAPTTDIIRQGRSTLVTTLQMFKILGLNCLATAYVLSVMYLDGVKLGDVQATISGVFTA-AFFLFISHARP 1012 (1191)
Q Consensus 934 aPFtsk~~~i~~v~~iir~GR~~Lvtt~~~fk~l~l~~li~~~s~svly~~g~~~~d~Q~~~~~~l~~-~~~~~~s~~~p 1012 (1191)
||||||.++|+||+++||||||+||||+.+||||++||+|||.++.+||+.+.++||.|+++.++++. ..+++||+++|
T Consensus 886 ApFTSk~~~I~cVp~vIrEGRaALVTSf~~FkYMalYs~iqFisv~~LY~~~~nl~D~Qfl~iDLlii~pia~~m~~~~a 965 (1140)
T KOG0208|consen 886 APFTSKTPSISCVPDVIREGRAALVTSFACFKYMALYSAIQFISVVFLYLINSNLGDLQFLFIDLLIITPIAVMMSRFDA 965 (1140)
T ss_pred CccccCCCchhhHhHHHhhhhhhhhhhHHHHHHHHHHHHHHHHhhheeeeecccccchhhhhhHHHHHHHHHHHHccCcH
Confidence 99999999999999999999999999999999999999999999999999999999999999998865 57899999999
Q ss_pred CCccccCCCCCCccchhhHHHHHHHHHHHHHHHHHHhhh---hcccCCCCCCCCCCCCCCcccchhhhHHHHHHHHhhhe
Q 001010 1013 LPTLSAARPHPNIFCSYVFLSLMGQFAIHLFFLISSVKE---AEKYMPDECIEPDADFHPNLVNTVSYMVNMMIQVATFA 1089 (1191)
Q Consensus 1013 ~~~Ls~~rP~~~if~~~~~~si~~Q~~i~~~~l~~~~~~---~~~~~~~~~~~~~~~f~p~~~nt~vfl~~~~~~i~~~~ 1089 (1191)
+.+|.+.||+++|++...+.++++|+++..+.+...+.. ..||.|.+... .+..+|..||++|++|+|||+..++
T Consensus 966 ~~~L~~~rP~~~L~s~~~~~~l~~q~vli~l~q~i~~l~~~~qpw~~pp~~~~--~~nt~s~~~T~lF~vS~fqYi~~a~ 1043 (1140)
T KOG0208|consen 966 SDKLFPKRPPTNLLSKKILVPLLLQIVLICLVQWILTLIVEPQPWYEPPNPQV--DDNTQSSDNTSLFFVSSFQYIFIAL 1043 (1140)
T ss_pred HHHhcCCCCCccccccchhhhhHHHHHHHHHHHHhhheeeccccceecCCCCc--CcccccceeeEeeehhHHHHHHhhe
Confidence 999999999999999999999999999988887655433 44666654222 3457899999999999999999999
Q ss_pred eEecCCCcccccccchhHHHHHHHHHHHHHHh--hcccchhhhhccceeeCCh-hHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001010 1090 VNYMGHPFNQSISENKPFMYALMGAVGFFTVI--TSDLLRSLNDWLKLVPLPS-GLRDKLLIWAGLMFLGCYSWERFLRW 1166 (1191)
Q Consensus 1090 v~~~g~Pf~~~~~~N~~~~~~l~~~~~~~~~~--~~~~~~~~~~~~~lv~~p~-~~~~~l~~~~~~~~~~~~~~e~~~~~ 1166 (1191)
+.++|.|||+|+|+|+.|...+.+..+..+.+ +-+.++.. ..+++.+.|+ .+++.++.+.+..+++.+..+-+-++
T Consensus 1044 v~S~g~pfr~pl~~n~~f~~~i~~i~~~~i~l~~~~~~~~~~-~l~~~t~~~~~~~~fii~~~~~~~~~~~~~~~~~~~~ 1122 (1140)
T KOG0208|consen 1044 VLSKGSPFRRPLWKNVLFKVFITVIILSTIYLLFVNYLFIEW-KLLQLTYIPTTFDRFIILLVVISYFALNYIQPSVGRM 1122 (1140)
T ss_pred eeccCCcccCchhcCceeeeehhhHHhhhhhhhhccccchhh-hhhceeccCcchhHHHHHHHHHHHHHHHHhhhhhhch
Confidence 99999999999999999976555544443333 33334444 6799999998 56666777777788888777655544
Q ss_pred h
Q 001010 1167 A 1167 (1191)
Q Consensus 1167 ~ 1167 (1191)
+
T Consensus 1123 ~ 1123 (1140)
T KOG0208|consen 1123 L 1123 (1140)
T ss_pred h
Confidence 4
|
|
| >TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V) | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.8e-170 Score=1645.86 Aligned_cols=983 Identities=42% Similarity=0.670 Sum_probs=854.1
Q ss_pred hHHHHHHHHHHHHhhcccChhhhheeeeccCCCcCCCcEEEEEeCCCCCceeeEEeeeeccccc----cCCCCCCceEEE
Q 001010 54 VLGGLVAFHILVWLFTAWSVDFKCFAHYSKINDIHLADACKITPVKFCGSKEVVPLQFWKQSAV----SSTPVDEDEICF 129 (1191)
Q Consensus 54 ~~~~~~~~~~l~~l~~~W~~~~~~~~~~~~~~~~~~a~~~~v~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~f 129 (1191)
+.+..++.|++++|++||+++||++++|++|+..+.|+|+++.|.++.|+.+++++++...... .........+||
T Consensus 19 ~~~~~~~~~g~~~l~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f 98 (1054)
T TIGR01657 19 YLVTLILTFGLVLLLLTWLPEWKVKLRYVPVSNEDAETVVIVDPTPNSGSDYIVELSNKSLSNDLQTENAVEGGEEPIYF 98 (1054)
T ss_pred HHHHHHHHHHHHHHHHHhHHHHhhhEEEeeCCcccCcEEEEEECCcccCCceEEeecccccccccccccccCCCCceEEE
Confidence 4556778999999999999999999999999999999999999988999999999875322110 011234467899
Q ss_pred EEEeEEEEEECCCCc-eeeCCCChhhh-HHhhhh---cCCCCCHHHHHHHHhccCCCccCCCCCcHHHHHHHHhhhHHHH
Q 001010 130 DFRKQHFIYSREKGT-FCKLPYPTKET-FGYYLK---CTGHSTEAKIAVATEKWGRNVFEYPQPTFQKLMKENCMEPFFV 204 (1191)
Q Consensus 130 ~~~~~~y~~~~~~~~-f~~~~~~~~~~-~~~~~~---~~g~ls~~e~~~~~~~yG~N~i~i~~~s~~~ll~~~~~~pf~v 204 (1191)
+||+.||+|+++++. |.+++++.++. ...+.+ ...|++++|+++|+++||+|++++|.|+++++|++++++||++
T Consensus 99 ~~~~~~y~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~GLs~~e~~~r~~~yG~N~i~~~~~s~~~ll~~~~~~p~~i 178 (1054)
T TIGR01657 99 DFRKQRFSYHEKELKIFSPLPYLFKEKSFGVYSTCAGHSNGLTTGDIAQRKAKYGKNEIEIPVPSFLELLKEEVLHPFYV 178 (1054)
T ss_pred EEEEEEEEEECCCCceEEecccccccccchhhhhhhhhccCCCHHHHHHHHHhcCCCeeecCCCCHHHHHHHHHhchHHH
Confidence 999999999999996 99999886654 334432 2356789999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCceEEEEECCEEEEEecCCCCCCcEEEEc--
Q 001010 205 FQVFCVGLWCLDEYWYYSLFTLFMLFMFESTMAKSRLKTLTEIRRVRVDNQTIMVHRCGKWVKLAGTDLVPGDVVSIG-- 282 (1191)
Q Consensus 205 fqi~~v~lw~l~~y~~ysl~~l~m~vv~~~~~~~~~~r~~~~l~~m~~~~~~v~V~R~g~~~~I~s~eLvpGDIV~l~-- 282 (1191)
||++|+++|++++||+|++++++++++.+....++++|+.++|++|...+..++|+|||+|++|+++||||||+|.|+
T Consensus 179 ~~i~~~~l~~~~~~~~~~~~i~~i~~~~~~~~~~~~~k~~~~L~~~~~~~~~v~V~Rdg~~~~I~s~eLvpGDiv~l~~~ 258 (1054)
T TIGR01657 179 FQVFSVILWLLDEYYYYSLCIVFMSSTSISLSVYQIRKQMQRLRDMVHKPQSVIVIRNGKWVTIASDELVPGDIVSIPRP 258 (1054)
T ss_pred HHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCeeEEEEECCEEEEEEcccCCCCCEEEEecC
Confidence 999999999999999999999999999999999999999999999987788999999999999999999999999999
Q ss_pred CCCCCCCCCceeeeeEEEEecceeeecccccCCCCceecccccCC-CCc-cccccccCCCeeEeeceEEeecCCCCCCCC
Q 001010 283 RSSGQTGEDKSVPADMLILGGSAIVNEAILTGESTPQWKVSIMGR-ETG-EKLSARRDKSHVLFGGTKILQHTPDKTFPL 360 (1191)
Q Consensus 283 ~g~gd~~~~~~VPaD~iLl~G~~~VdES~LTGES~Pv~K~~i~~~-~~~-~~~~~~~~k~~~lfaGT~vlq~~~~~~~~~ 360 (1191)
+| ++|||||+|++|+|.||||+|||||+|+.|.+++.. ..+ +......+++|++|+||.|+|++++..
T Consensus 259 ~g-------~~iPaD~~ll~g~~~VdES~LTGES~Pv~K~~~~~~~~~~~~~~~~~~~~~~~lf~GT~v~~~~~~~g--- 328 (1054)
T TIGR01657 259 EE-------KTMPCDSVLLSGSCIVNESMLTGESVPVLKFPIPDNGDDDEDLFLYETSKKHVLFGGTKILQIRPYPG--- 328 (1054)
T ss_pred CC-------CEecceEEEEeCcEEEecccccCCccceecccCCccccccccccccccccceEEEcCCEEEEEecCCC---
Confidence 65 799999999999999999999999999999987541 111 222334578999999999998765321
Q ss_pred CCCCCcEEEEEEEecccchhhHHHHHhccccccccchhhhHHHHHHHHHHHHHHhhheeeeecccCCCcchhHHHHHHHH
Q 001010 361 KTPDGGCLAVVLRTGFETSQGKLMRTILFSTERVTANSWESGLFILFLVVFAVIAAGYVLKKGMEDPTRSKYKLFLSCSL 440 (1191)
Q Consensus 361 ~~~~g~~~~vV~~TG~~T~~Gkl~r~i~~~~~~~~~~~~~~~~fi~~lli~aii~~~~~~~~~~~~~~~~~~~~~l~~i~ 440 (1191)
+|.+.|+|++||++|.+|+++|++.+++++.+++++++..|+.+++++|++++++++..+... +.++.+++++|++
T Consensus 329 ---~g~~~~vV~~TG~~T~~G~i~~~i~~~~~~~~~~~~~~~~~~~~l~~~a~i~~i~~~~~~~~~-~~~~~~~~l~~l~ 404 (1054)
T TIGR01657 329 ---DTGCLAIVVRTGFSTSKGQLVRSILYPKPRVFKFYKDSFKFILFLAVLALIGFIYTIIELIKD-GRPLGKIILRSLD 404 (1054)
T ss_pred ---CCcEEEEEEeCCccccchHHHHHhhCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CCcHHHHHHHHHH
Confidence 578999999999999999999999999998899999999999999999988887776555432 4577889999999
Q ss_pred hhhhccCCCcchHHHHHHHHHHHHHHhcCccccCCCcccccCCccEEEecccccccCCceEEEEEeecCCCcc-----cc
Q 001010 441 IITSVIPPELPMELSIAVNTSLIALARRGIFCTEPFRIPFAGKVDMCCFDKTGTLTSDDMEFRGVVGLSNAEL-----ED 515 (1191)
Q Consensus 441 iit~~vP~~LP~~lslav~~s~~~L~k~~I~~~~p~~i~~~G~vd~icfDKTGTLT~~~l~v~gv~~~~~~~~-----~~ 515 (1191)
+++++|||+||++++++++.|+.||+|++|+|++|.++|.+|++|+||||||||||+|+|+|.+++..+.... ..
T Consensus 405 iiv~~vP~~LP~~~ti~l~~~~~rL~k~~il~~~~~~ie~lG~v~vicfDKTGTLTen~m~v~~v~~~~~~~~~~~~~~~ 484 (1054)
T TIGR01657 405 IITIVVPPALPAELSIGINNSLARLKKKGIFCTSPFRINFAGKIDVCCFDKTGTLTEDGLDLRGVQGLSGNQEFLKIVTE 484 (1054)
T ss_pred HHHhhcCchHHHHHHHHHHHHHHHHHHCCEEEcCcccceecceeeEEEEcCCCCCccCCeeEEeEecccCcccccccccc
Confidence 9999999999999999999999999999999999999999999999999999999999999999987543111 00
Q ss_pred ccCCCchHHHHHHhhccceEEeCCcccCChHHHHHHhcccccccCC-CccccCC--------CCCCcccEEEEecCCCCC
Q 001010 516 DMTKVPVRTQEILASCHALVFVDNKLVGDPLEKAALKGIDWSYKSD-EKAMPKR--------GGGNAVQIVQRHHFASHL 586 (1191)
Q Consensus 516 ~~~~~~~~~~~~la~chsl~~~~~~~~GdPle~all~~~~~~~~~~-~~~~~~~--------~~~~~~~il~~~~Fss~~ 586 (1191)
.....+.....++++||++...+|+++|||+|.|++++++|.+..+ +...... .....++++++|||+|++
T Consensus 485 ~~~~~~~~~~~~~a~C~~~~~~~~~~~Gdp~E~al~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~il~~~pF~S~~ 564 (1054)
T TIGR01657 485 DSSLKPSITHKALATCHSLTKLEGKLVGDPLDKKMFEATGWTLEEDDESAEPTSILAVVRTDDPPQELSIIRRFQFSSAL 564 (1054)
T ss_pred ccccCchHHHHHHHhCCeeEEECCEEecCHHHHHHHHhCCCEEECCCCcccccccccceeccCCCceEEEEEEEeecCCC
Confidence 1112334566789999999988999999999999999999987652 2111110 112568999999999999
Q ss_pred CcEEEEEEeCC--eEEEEEeCcHHHHHHhcc--CChHHHHHHHHHHHHhcCeeeeEEEEeCCCCChhhhhhccccccccC
Q 001010 587 KRMSVVVRVQE--EFFAFVKGAPETIQDRLT--DLPSSYIETYKKYTHQGSRVLALAFKSLPDMTVSDARSLHRDEVENG 662 (1191)
Q Consensus 587 krmsvvv~~~~--~~~~~~KGapE~I~~~~~--~~p~~~~~~~~~~a~~G~RVLalA~k~l~~~~~~~~~~~~r~~~E~d 662 (1191)
|||||+++..+ ++++++|||||.|.++|. ++|++|++.+++|+++|+||||+|||++++.+.++..+++|+++|+|
T Consensus 565 krMsvvv~~~~~~~~~~~~KGApE~Il~~c~~~~~p~~~~~~~~~~a~~G~RVLalA~k~l~~~~~~~~~~~~r~~~E~~ 644 (1054)
T TIGR01657 565 QRMSVIVSTNDERSPDAFVKGAPETIQSLCSPETVPSDYQEVLKSYTREGYRVLALAYKELPKLTLQKAQDLSRDAVESN 644 (1054)
T ss_pred CEEEEEEEEcCCCeEEEEEECCHHHHHHHcCCcCCChhHHHHHHHHHhcCCEEEEEEEeecCccchhhhhhccHHHHhcC
Confidence 99999999753 578999999999999997 78999999999999999999999999998655555667889999999
Q ss_pred eEEeeeecccCcCCchhHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCC-cEEEee-----cCCCceeeecCCC
Q 001010 663 LTFAGFAVFNCPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKP-VLILCP-----VKNGKVYEWVSPD 736 (1191)
Q Consensus 663 L~flG~l~~~d~lK~da~~~I~~L~~agi~vvMiTGDn~~TA~~VA~~~gI~~~~-~~il~~-----~~~~~~~~w~~~d 736 (1191)
|+|+|+++|+||+|||++++|++|+++||+++|+||||++||.+||++|||++++ .+++.+ .+++..+.|+..+
T Consensus 645 L~flGli~~~d~lr~~~~~~I~~l~~agi~v~miTGD~~~TA~~iA~~~gii~~~~~vi~~~~~~~~~~~~~~~~~~~~~ 724 (1054)
T TIGR01657 645 LTFLGFIVFENPLKPDTKEVIKELKRASIRTVMITGDNPLTAVHVARECGIVNPSNTLILAEAEPPESGKPNQIKFEVID 724 (1054)
T ss_pred ceEEEEEEEecCCCccHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCceEEEeecccccCCCCceEEEEecC
Confidence 9999999999999999999999999999999999999999999999999999654 444432 1234568898876
Q ss_pred ccc------cccCChH---HHhcccccceEEEechhhhhhcch--HHHHhhcCcceEEeecChhhHHHHHHHHhHcCCEE
Q 001010 737 ETE------KIQYSEK---EVEGLTDAHDLCIGGDCFEMLQQT--SAVLRVIPYVKVFARVAPEQKELILTTFKAVGRMT 805 (1191)
Q Consensus 737 ~~~------~~~~~~~---~~~~~~~~~~l~itG~~l~~l~~~--~~~~~~l~~~~VfAR~sP~qK~~iV~~Lq~~g~~V 805 (1191)
+.. ..+.... ......+++++|+||+.++.+.+. +++.+++.+++|||||+|+||.++|+.||+.|++|
T Consensus 725 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~itG~~l~~l~~~~~~~l~~~~~~~~VfAR~sP~qK~~iV~~lq~~g~~V 804 (1054)
T TIGR01657 725 SIPFASTQVEIPYPLGQDSVEDLLASRYHLAMSGKAFAVLQAHSPELLLRLLSHTTVFARMAPDQKETLVELLQKLDYTV 804 (1054)
T ss_pred ccccccccccccCcccccchhhhcccceEEEEEcHHHHHHHHhhHHHHHHHHhcCeEEEecCHHHHHHHHHHHHhCCCeE
Confidence 531 1111110 111234567899999999987543 57889999999999999999999999999999999
Q ss_pred EEEcCCccCHHHHhhCCceEEeccCCCccccccCCcccccccchhhhhccccccchhhhhhhhccCCCCCCccchhhhhh
Q 001010 806 LMCGDGTNDVGALKQAHVGVALLNAVPPTQSGNSSSEASKDENTKSVKSKKSKSASEAASKAMSLNSEGTSKGKASARLE 885 (1191)
Q Consensus 806 ~m~GDG~ND~~ALk~AdVGIAl~~~~~e~~~~asdi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 885 (1191)
+|||||+|||||||+|||||||++
T Consensus 805 ~m~GDG~ND~~ALK~AdVGIam~~-------------------------------------------------------- 828 (1054)
T TIGR01657 805 GMCGDGANDCGALKQADVGISLSE-------------------------------------------------------- 828 (1054)
T ss_pred EEEeCChHHHHHHHhcCcceeecc--------------------------------------------------------
Confidence 999999999999999999999994
Q ss_pred hcccccccccchHHHHHHHHHHHHHHHHhhcCCCCCCCccccCcccccCCCccCcCCccchhhhhhccchHHHHHHhhhH
Q 001010 886 ANSRTAGNRHLTAAEMQREKLKKMMEELNEEGDGRSAPIVKLGDASMASPFTAKHASVAPTTDIIRQGRSTLVTTLQMFK 965 (1191)
Q Consensus 886 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~klgdASiaaPFtsk~~~i~~v~~iir~GR~~Lvtt~~~fk 965 (1191)
+|||+|||||++.+|++||+++||||||+|+++++|||
T Consensus 829 ------------------------------------------~das~AA~f~l~~~~~~~I~~~I~eGR~~l~~~~~~~~ 866 (1054)
T TIGR01657 829 ------------------------------------------AEASVAAPFTSKLASISCVPNVIREGRCALVTSFQMFK 866 (1054)
T ss_pred ------------------------------------------ccceeecccccCCCcHHHHHHHHHHHHHHHHHHHHHHH
Confidence 48999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhhccccccchHHHHHhHHH-HHHHHHhhccCCCCccccCCCCCCccchhhHHHHHHHHHHHHHH
Q 001010 966 ILGLNCLATAYVLSVMYLDGVKLGDVQATISGVFT-AAFFLFISHARPLPTLSAARPHPNIFCSYVFLSLMGQFAIHLFF 1044 (1191)
Q Consensus 966 ~l~l~~li~~~s~svly~~g~~~~d~Q~~~~~~l~-~~~~~~~s~~~p~~~Ls~~rP~~~if~~~~~~si~~Q~~i~~~~ 1044 (1191)
||++||++++++++++|+.|.+|+|.|+++.++++ ++++++|++++|.++|+++||..+||+++++.|+++|+++|+++
T Consensus 867 ~~~~~~~~~~~~~~~l~~~~~~l~~~Q~l~i~li~~~~~~l~l~~~~p~~~l~~~~P~~~l~~~~~~~si~~q~~i~~~~ 946 (1054)
T TIGR01657 867 YMALYSLIQFYSVSILYLIGSNLGDGQFLTIDLLLIFPVALLMSRNKPLKKLSKERPPSNLFSVYILTSVLIQFVLHILS 946 (1054)
T ss_pred HHHHHHHHHHHHHHHHHHccCcCccHHHHHHHHHHHHHHHHHHHcCCchhhcCCCCCCccccCHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999888876 46899999999999999999999999999999999999999999
Q ss_pred HHHHhhhhc---ccCCCCCCCCCCCCCCcccchhhhHHHHHHHHhhheeEecCCCcccccccchhHHHHHHHHHHHHHHh
Q 001010 1045 LISSVKEAE---KYMPDECIEPDADFHPNLVNTVSYMVNMMIQVATFAVNYMGHPFNQSISENKPFMYALMGAVGFFTVI 1121 (1191)
Q Consensus 1045 l~~~~~~~~---~~~~~~~~~~~~~f~p~~~nt~vfl~~~~~~i~~~~v~~~g~Pf~~~~~~N~~~~~~l~~~~~~~~~~ 1121 (1191)
+++++.... ||.|....+.+++|.||++||++|+++++||+.+|++||.|+|||+++++|++|++++++..++.+++
T Consensus 947 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~T~~f~~~~~~~~~~~~~~~~g~pf~~~~~~N~~~~~~~~~~~~~~~~~ 1026 (1054)
T TIGR01657 947 QVYLVFELHAQPWYKPENPVDLEKENFPNLLNTVLFFVSSFQYLITAIVNSKGPPFREPIYKNKPFVYLLITGLGLLLVL 1026 (1054)
T ss_pred HHHHHHHHhhCCCccCCCCCCcccccCccHHHHHHHHHHHHHHHHheEEEcCCcchhhhHHHhHHHHHHHHHHHHHHHHh
Confidence 988876543 44444444566789999999999999999999999999999999999999999999999988888888
Q ss_pred hcccchhhhhccceeeCChhHHHHHHH
Q 001010 1122 TSDLLRSLNDWLKLVPLPSGLRDKLLI 1148 (1191)
Q Consensus 1122 ~~~~~~~~~~~~~lv~~p~~~~~~l~~ 1148 (1191)
++...|++|.+|+++++|.+||..++.
T Consensus 1027 ~~~~~~~l~~~~~~~~~~~~~~~~l~~ 1053 (1054)
T TIGR01657 1027 LLDPHPLLGKILQIVPLPQEFRSKLLV 1053 (1054)
T ss_pred hhCCCHHHHhhheeeeCCHHHHHHHhh
Confidence 888999999999999999999988764
|
These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in. |
| >COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-116 Score=1126.09 Aligned_cols=819 Identities=26% Similarity=0.337 Sum_probs=666.1
Q ss_pred hhHHhhhhc-CCCCCHHHHHHHHhccCCCccCCCC-CcHHHHHHHHhhhHHHHHHHHHHHHHhhhhHH----HHHHHHHH
Q 001010 154 ETFGYYLKC-TGHSTEAKIAVATEKWGRNVFEYPQ-PTFQKLMKENCMEPFFVFQVFCVGLWCLDEYW----YYSLFTLF 227 (1191)
Q Consensus 154 ~~~~~~~~~-~g~ls~~e~~~~~~~yG~N~i~i~~-~s~~~ll~~~~~~pf~vfqi~~v~lw~l~~y~----~ysl~~l~ 227 (1191)
+...++..+ ..|++++|+.+|++.||+|++...+ .+++..|+.++.+||..+++++.++..+-..| .++.++++
T Consensus 32 ~~~~~~~~~~~~GLs~~e~~~r~~~~G~N~~~~~~~~~~~~~fl~~f~~~~~~iL~~~a~~s~~~~~~~~~~~~~~~I~~ 111 (917)
T COG0474 32 ELLLELFTSPTTGLSEEEVKRRLKKYGPNELPEEKKRSLLKKFLRQFKDPFIILLLVAALLSAFVGDWVDAGVDAIVILL 111 (917)
T ss_pred hHHHhhcCCcccCCCHHHHHHHHhhcCCccccccccCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcceeeehH
Confidence 344444443 4567889999999999999999765 59999999999999988888877776655554 34434444
Q ss_pred HHHHHHHHH---HHHHHHHHHHHHhhccCCceEEEEECCEEEEEecCCCCCCcEEEEcCCCCCCCCCceeeeeEEEEecc
Q 001010 228 MLFMFESTM---AKSRLKTLTEIRRVRVDNQTIMVHRCGKWVKLAGTDLVPGDVVSIGRSSGQTGEDKSVPADMLILGGS 304 (1191)
Q Consensus 228 m~vv~~~~~---~~~~~r~~~~l~~m~~~~~~v~V~R~g~~~~I~s~eLvpGDIV~l~~g~gd~~~~~~VPaD~iLl~G~ 304 (1191)
++++..... .++..++++++++|. +.+++|+|||+|++|+++||||||||.++.| +.||||++|++++
T Consensus 112 ~i~~n~~~g~~qe~~a~~~l~~lk~~~--~~~~~V~R~g~~~~i~a~eLVpGDiV~l~~g-------d~vPAD~rLl~~~ 182 (917)
T COG0474 112 VVVINALLGFVQEYRAEKALEALKKMS--SPKAKVLRDGKFVEIPASELVPGDIVLLEAG-------DVVPADLRLLESS 182 (917)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhc--cCceEEEeCCcEEEecHHHCCCCcEEEECCC-------CccccceEEEEec
Confidence 444333333 444555577777776 6789999999999999999999999999977 7999999999998
Q ss_pred e-eeecccccCCCCceecccccCCCCccccccccCCCeeEeeceEEeecCCCCCCCCCCCCCcEEEEEEEecccchhhHH
Q 001010 305 A-IVNEAILTGESTPQWKVSIMGRETGEKLSARRDKSHVLFGGTKILQHTPDKTFPLKTPDGGCLAVVLRTGFETSQGKL 383 (1191)
Q Consensus 305 ~-~VdES~LTGES~Pv~K~~i~~~~~~~~~~~~~~k~~~lfaGT~vlq~~~~~~~~~~~~~g~~~~vV~~TG~~T~~Gkl 383 (1191)
+ .||||+|||||.|+.|.+.+....+.... .++.|++|+||.|. .|.+.++|++||++|..|++
T Consensus 183 ~l~VdEs~LTGES~pv~K~~~~~~~~~~~~~--~d~~n~l~sGt~V~-------------~G~~~giVvaTG~~T~~G~i 247 (917)
T COG0474 183 DLEVDESALTGESLPVEKQALPLTKSDAPLG--LDRDNMLFSGTTVV-------------SGRAKGIVVATGFETEFGKI 247 (917)
T ss_pred CceEEcccccCCCcchhcccccccccccccc--CCccceEEeCCEEE-------------cceEEEEEEEEcCccHHHHH
Confidence 7 99999999999999999865543322221 25799999999999 79999999999999999999
Q ss_pred HHHhccccccccchhhhHHHHHHHHHHHHHHhhheeeeecccCCCcchhHHHHHHHHhhhhccCCCcchHHHHHHHHHHH
Q 001010 384 MRTILFSTERVTANSWESGLFILFLVVFAVIAAGYVLKKGMEDPTRSKYKLFLSCSLIITSVIPPELPMELSIAVNTSLI 463 (1191)
Q Consensus 384 ~r~i~~~~~~~~~~~~~~~~fi~~lli~aii~~~~~~~~~~~~~~~~~~~~~l~~i~iit~~vP~~LP~~lslav~~s~~ 463 (1191)
.+.+...++..+++++....+..+++.++++++++++..++......+...++.++.+++++||++||+.++++.+.+..
T Consensus 248 a~~~~~~~~~~t~l~~~l~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~l~va~IPegLp~~vti~la~g~~ 327 (917)
T COG0474 248 ARLLPTKKEVKTPLQRKLNKLGKFLLVLALVLGALVFVVGLFRGGNGLLESFLTALALAVAAVPEGLPAVVTIALALGAQ 327 (917)
T ss_pred HHhhccccccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHhccccchHHHHHHHHHHHHH
Confidence 99998776788899999999998888888887777665553321222678899999999999999999999999999999
Q ss_pred HHHhcCccccCCCcccccCCccEEEecccccccCCceEEEEEeecC-CCccccccCCCc---hHHHHHHhhccceEEeC-
Q 001010 464 ALARRGIFCTEPFRIPFAGKVDMCCFDKTGTLTSDDMEFRGVVGLS-NAELEDDMTKVP---VRTQEILASCHALVFVD- 538 (1191)
Q Consensus 464 ~L~k~~I~~~~p~~i~~~G~vd~icfDKTGTLT~~~l~v~gv~~~~-~~~~~~~~~~~~---~~~~~~la~chsl~~~~- 538 (1191)
+|+|++++|+++.++|.+|++|+||+|||||||+|+|+|++++..+ ..+......... .+....++.||+.....
T Consensus 328 ~mak~~~ivr~l~avE~LG~v~vICsDKTGTLTqN~M~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~lc~~~~~~~~ 407 (917)
T COG0474 328 RMAKDNAIVRSLNAIETLGSVDVICSDKTGTLTQNKMTVKKIYINGGGKDIDDKDLKDSPALLRFLLAAALCNSVTPEKN 407 (917)
T ss_pred HHHhccchhhccchhhhccCccEEEecCCCCCccCeEEEEEEEeCCCcccccccccccchHHHHHHHHHHhcCccccccc
Confidence 9999999999999999999999999999999999999999999874 222221000111 13456778999877543
Q ss_pred -CcccCChHHHHHHhcccccccCCCccccCCCCCCcccEEEEecCCCCCCcEEEEEEe-CCeEEEEEeCcHHHHHHhccC
Q 001010 539 -NKLVGDPLEKAALKGIDWSYKSDEKAMPKRGGGNAVQIVQRHHFASHLKRMSVVVRV-QEEFFAFVKGAPETIQDRLTD 616 (1191)
Q Consensus 539 -~~~~GdPle~all~~~~~~~~~~~~~~~~~~~~~~~~il~~~~Fss~~krmsvvv~~-~~~~~~~~KGapE~I~~~~~~ 616 (1191)
....|||+|.|+++++.+.-... ........+++++.+||+|++|||||+++. ++++++++|||||.|.++|+.
T Consensus 408 ~~~~~gdptE~Al~~~a~~~~~~~----~~~~~~~~~~~~~~~PFdS~rKrMsviv~~~~~~~~~~~KGApe~il~~~~~ 483 (917)
T COG0474 408 GWYQAGDPTEGALVEFAEKLGFSL----DLSGLEVEYPILAEIPFDSERKRMSVIVKTDEGKYILFVKGAPEVILERCKS 483 (917)
T ss_pred CceecCCccHHHHHHHHHhcCCcC----CHHHHhhhcceeEEecCCCCceEEEEEEEcCCCcEEEEEcCChHHHHHHhcc
Confidence 44689999999999887542210 111112345789999999999999999984 446899999999999999962
Q ss_pred ----------ChHHHHHHHHHHHHhcCeeeeEEEEeCCCCChhhhhhccccccccCeEEeeeecccCcCCchhHHHHHHH
Q 001010 617 ----------LPSSYIETYKKYTHQGSRVLALAFKSLPDMTVSDARSLHRDEVENGLTFAGFAVFNCPIREDSAKILSEL 686 (1191)
Q Consensus 617 ----------~p~~~~~~~~~~a~~G~RVLalA~k~l~~~~~~~~~~~~r~~~E~dL~flG~l~~~d~lK~da~~~I~~L 686 (1191)
.++.+.+..++|+++|+|||++|||.++...... .. ++.|+||+|+|+++|+||+|+|++++|++|
T Consensus 484 ~~~~~~~~~~~~~~~~~~~~~la~~glRvla~A~k~~~~~~~~~---~~-~~~E~dl~~lGl~g~~Dppr~~v~~aI~~l 559 (917)
T COG0474 484 IGELEPLTEEGLRTLEEAVKELASEGLRVLAVAYKKLDRAEKDD---EV-DEIESDLVFLGLTGIEDPPREDVKEAIEEL 559 (917)
T ss_pred cCcccccCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcccccc---hh-hhhhccceeehhhhccCCCCccHHHHHHHH
Confidence 3578889999999999999999999775432211 11 789999999999999999999999999999
Q ss_pred HhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCcEEEeecCCCceeeecCCCccccccCChHHHhcccccceEEEechhhhh
Q 001010 687 KNSSQDLAMITGDQALTACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLTDAHDLCIGGDCFEM 766 (1191)
Q Consensus 687 ~~agi~vvMiTGDn~~TA~~VA~~~gI~~~~~~il~~~~~~~~~~w~~~d~~~~~~~~~~~~~~~~~~~~l~itG~~l~~ 766 (1191)
++|||++|||||||++||.+||++|||..+. .. ++++||..++.
T Consensus 560 ~~AGI~v~MiTGD~~~TA~aIa~~~Gi~~~~-----------------------------------~~-~~vi~G~el~~ 603 (917)
T COG0474 560 REAGIKVWMITGDHVETAIAIAKECGIEAEA-----------------------------------ES-ALVIDGAELDA 603 (917)
T ss_pred HHCCCcEEEECCCCHHHHHHHHHHcCCCCCC-----------------------------------Cc-eeEeehHHhhh
Confidence 9999999999999999999999999985211 00 67999999999
Q ss_pred hcchHHHHhhcCcceEEeecChhhHHHHHHHHhHcCCEEEEEcCCccCHHHHhhCCceEEeccCCCccccccCCcccccc
Q 001010 767 LQQTSAVLRVIPYVKVFARVAPEQKELILTTFKAVGRMTLMCGDGTNDVGALKQAHVGVALLNAVPPTQSGNSSSEASKD 846 (1191)
Q Consensus 767 l~~~~~~~~~l~~~~VfAR~sP~qK~~iV~~Lq~~g~~V~m~GDG~ND~~ALk~AdVGIAl~~~~~e~~~~asdi~~~~~ 846 (1191)
+.++ ++.+.+.++.||||+||+||.++|+.||+.|++|+|||||+||+||||+|||||||+..++|+++++||+++.+|
T Consensus 604 l~~~-el~~~~~~~~VfARvsP~qK~~IV~~lq~~g~vVamtGDGvNDapALk~ADVGIamg~~Gtdaak~Aadivl~dd 682 (917)
T COG0474 604 LSDE-ELAELVEELSVFARVSPEQKARIVEALQKSGHVVAMTGDGVNDAPALKAADVGIAMGGEGTDAAKEAADIVLLDD 682 (917)
T ss_pred cCHH-HHHHHhhhCcEEEEcCHHHHHHHHHHHHhCCCEEEEeCCCchhHHHHHhcCccEEecccHHHHHHhhcceEeecC
Confidence 9885 788888888899999999999999999999999999999999999999999999999888887777777666554
Q ss_pred cchhhhhccccccchhhhhhhhccCCCCCCccchhhhhhhcccccccccchHHHHHHHHHHHHHHHHhhcCCCCCCCccc
Q 001010 847 ENTKSVKSKKSKSASEAASKAMSLNSEGTSKGKASARLEANSRTAGNRHLTAAEMQREKLKKMMEELNEEGDGRSAPIVK 926 (1191)
Q Consensus 847 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k 926 (1191)
T Consensus 683 -------------------------------------------------------------------------------- 682 (917)
T COG0474 683 -------------------------------------------------------------------------------- 682 (917)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cCcccccCCCccCcCCccchhhhhhccchHHHHHHhhhHHHHHHHHHHHHHHHHhhhcccc---ccchHHHHHhHHHHH-
Q 001010 927 LGDASMASPFTAKHASVAPTTDIIRQGRSTLVTTLQMFKILGLNCLATAYVLSVMYLDGVK---LGDVQATISGVFTAA- 1002 (1191)
Q Consensus 927 lgdASiaaPFtsk~~~i~~v~~iir~GR~~Lvtt~~~fk~l~l~~li~~~s~svly~~g~~---~~d~Q~~~~~~l~~~- 1002 (1191)
++.++.++++|||+++.+..++.+|+...++...+.+.+.++.+.. |++.|+++.+++++.
T Consensus 683 ---------------~~~~i~~av~eGR~~~~ni~k~i~~~l~~n~~~~~~~~~~~~~~~~~~p~~~~qll~inll~d~~ 747 (917)
T COG0474 683 ---------------NFATIVLAVVEGRRVYVNIKKFILYLLSKNVGEVLTLLIYSLFNLFFLPLTPLQLLWINLLTDSL 747 (917)
T ss_pred ---------------cHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHhhh
Confidence 5678899999999999999999999999999988888888777777 999999999999865
Q ss_pred HHHHhhccC-CCCccccC--CCCCCccchhhHHHHHHHHHHHHHHHHHHhhhhcccCCCC-CCCCCCCCCCcccchhhhH
Q 001010 1003 FFLFISHAR-PLPTLSAA--RPHPNIFCSYVFLSLMGQFAIHLFFLISSVKEAEKYMPDE-CIEPDADFHPNLVNTVSYM 1078 (1191)
Q Consensus 1003 ~~~~~s~~~-p~~~Ls~~--rP~~~if~~~~~~si~~Q~~i~~~~l~~~~~~~~~~~~~~-~~~~~~~f~p~~~nt~vfl 1078 (1191)
++++++..+ |.+.+.+. +|..+||+.+.+..++++..+|++...+.......+.+.. ....+. +.+...++..+.
T Consensus 748 pa~~L~~~~~~~~~m~~~~~~p~~~i~~~~~~~~~i~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~-~~~~~~t~~f~~ 826 (917)
T COG0474 748 PALALGVEDPESDVMKRPPRGPEEGLFNRKIFWRFILIIGLLSAILFILTFLLYLLGFIANTLGLDL-FQALLQTTAFTV 826 (917)
T ss_pred hhheeecCCCcccccccCCCCccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccchhh-HHHHHHHHHHHH
Confidence 788888886 45555554 8889999999999999998888888766554444332211 111111 455667777788
Q ss_pred HHHHHHHhhheeEecCCCcccc-cccchhHHHHHHHHHHHHHHhhcccchhhh-hccceeeCC
Q 001010 1079 VNMMIQVATFAVNYMGHPFNQS-ISENKPFMYALMGAVGFFTVITSDLLRSLN-DWLKLVPLP 1139 (1191)
Q Consensus 1079 ~~~~~~i~~~~v~~~g~Pf~~~-~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~-~~~~lv~~p 1139 (1191)
+..+|++.++.+.+.++||.+. ++.|++++++++++..+.++.. ++|.++ ..|+..++.
T Consensus 827 ~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~l~l~~~--~~~~~~~~~f~~~~~~ 887 (917)
T COG0474 827 LVLIQLLLTLAVRSRGRPFLSSLLFSNKYLWLALLVIIILQLLII--FLPPLNLKIFQPTPLS 887 (917)
T ss_pred HHHHHHHHHHHHhccccchhhcccccCHHHHHHHHHHHHHHHHHH--HhHHhHhhhccCCCCc
Confidence 8888999999999999999998 5899999999999887777663 456666 678887777
|
|
| >TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-106 Score=1041.12 Aligned_cols=805 Identities=20% Similarity=0.243 Sum_probs=615.2
Q ss_pred hhhhHHhhhhc-CCCCC--HHHHHHHHhccCCCccCCCCC-cHHHHHHHHhhhHHHHHHHHHHHHHhhhh----------
Q 001010 152 TKETFGYYLKC-TGHST--EAKIAVATEKWGRNVFEYPQP-TFQKLMKENCMEPFFVFQVFCVGLWCLDE---------- 217 (1191)
Q Consensus 152 ~~~~~~~~~~~-~g~ls--~~e~~~~~~~yG~N~i~i~~~-s~~~ll~~~~~~pf~vfqi~~v~lw~l~~---------- 217 (1191)
.++.++.+.++ +.||+ ++|+++|+++||+|+++.|++ ++|+++++++.+|++++++++.+++++-.
T Consensus 44 ~~~~~~~l~t~~~~GLs~~~~ev~~r~~~yG~N~l~~~~~~s~~~~~~~~f~~~~~~~l~~~ails~~~~~~~~~~~~~~ 123 (941)
T TIGR01517 44 AEGIATKLKTDLNEGVRLSSSTLERREKVYGKNELPEKPPKSFLQIVWAALSDQTLILLSVAAVVSLVLGLPEPGEGKAD 123 (941)
T ss_pred HHHHHHHhCcCcccCCCCCHHHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHhCHHHHHHHHHHHHHHHHhhcccccccCc
Confidence 34567777765 34678 899999999999999998875 89999999999999888888777766532
Q ss_pred ---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc--CCceEEEEECCEEEEEecCCCCCCcEEEEcCCCCCCCCCc
Q 001010 218 ---YWYYSLFTLFMLFMFESTMAKSRLKTLTEIRRVRV--DNQTIMVHRCGKWVKLAGTDLVPGDVVSIGRSSGQTGEDK 292 (1191)
Q Consensus 218 ---y~~ysl~~l~m~vv~~~~~~~~~~r~~~~l~~m~~--~~~~v~V~R~g~~~~I~s~eLvpGDIV~l~~g~gd~~~~~ 292 (1191)
.|+.++++++++++.......+..++.++++++.. .+..++|+|||+|++|+++||||||+|.|++| +
T Consensus 124 ~~~~~~~~~~il~~v~~~~~i~~~~e~~~~~~~~~l~~~~~~~~~~ViRdG~~~~I~~~~Lv~GDiV~l~~G-------d 196 (941)
T TIGR01517 124 TETGWIEGVAILVSVILVVLVTAVNDYKKELQFRQLNREKSAQKIAVIRGGQEQQISIHDIVVGDIVSLSTG-------D 196 (941)
T ss_pred cccchHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHhccCCCceEEEECCEEEEEeHHHCCCCCEEEECCC-------C
Confidence 57777776666555444555555555554444432 35789999999999999999999999999987 8
Q ss_pred eeeeeEEEEec-ceeeecccccCCCCceecccccCCCCccccccccCCCeeEeeceEEeecCCCCCCCCCCCCCcEEEEE
Q 001010 293 SVPADMLILGG-SAIVNEAILTGESTPQWKVSIMGRETGEKLSARRDKSHVLFGGTKILQHTPDKTFPLKTPDGGCLAVV 371 (1191)
Q Consensus 293 ~VPaD~iLl~G-~~~VdES~LTGES~Pv~K~~i~~~~~~~~~~~~~~k~~~lfaGT~vlq~~~~~~~~~~~~~g~~~~vV 371 (1191)
+|||||+|++| ++.||||+|||||.|+.|.+ ++.|++|+||.|. +|.+.++|
T Consensus 197 ~IPaD~~li~g~~l~VdES~LTGES~pv~K~~--------------~~~n~v~~GT~v~-------------~G~~~~iV 249 (941)
T TIGR01517 197 VVPADGVFISGLSLEIDESSITGESDPIKKGA--------------PKDSFLLSGTVVN-------------EGSGRMLV 249 (941)
T ss_pred EecccEEEEEcCcEEEEecccCCCCCcccccC--------------CCCceEEeCCeEE-------------eeEEEEEE
Confidence 99999999999 89999999999999999975 2357899999999 79999999
Q ss_pred EEecccchhhHHHHHhccccccccchhhh----HHHHHHHHHHHHHHhhhee-----eeecccC------CCcchhHHHH
Q 001010 372 LRTGFETSQGKLMRTILFSTERVTANSWE----SGLFILFLVVFAVIAAGYV-----LKKGMED------PTRSKYKLFL 436 (1191)
Q Consensus 372 ~~TG~~T~~Gkl~r~i~~~~~~~~~~~~~----~~~fi~~lli~aii~~~~~-----~~~~~~~------~~~~~~~~~l 436 (1191)
++||.+|..||+++.+....+ .++.++. +.++..+.++++++.+..+ +.....+ ....+...+.
T Consensus 250 ~~tG~~T~~gki~~~~~~~~~-~t~l~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 328 (941)
T TIGR01517 250 TAVGVNSFGGKLMMELRAEGE-DTPLQEKLSELAGLIGKFGMGSAVLLFLVLSLRYVFRIIRGDGRDTEEDAQTFLDHFI 328 (941)
T ss_pred EEeCCCcHHHHHHHhhccCCC-CCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccccchhhHHHHHHHH
Confidence 999999999999998876543 3343332 2233332222222222111 1100000 0124566788
Q ss_pred HHHHhhhhccCCCcchHHHHHHHHHHHHHHhcCccccCCCcccccCCccEEEecccccccCCceEEEEEeecCCC-cccc
Q 001010 437 SCSLIITSVIPPELPMELSIAVNTSLIALARRGIFCTEPFRIPFAGKVDMCCFDKTGTLTSDDMEFRGVVGLSNA-ELED 515 (1191)
Q Consensus 437 ~~i~iit~~vP~~LP~~lslav~~s~~~L~k~~I~~~~p~~i~~~G~vd~icfDKTGTLT~~~l~v~gv~~~~~~-~~~~ 515 (1191)
.++.+++++|||+||++++++++.++.+|+|+|++++++..+|.+|++|++|||||||||+|+|.+.+++..++. +...
T Consensus 329 ~al~llv~~iP~~Lp~~vti~l~~~~~~mak~~ilvk~l~a~E~lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~ 408 (941)
T TIGR01517 329 IAVTIVVVAVPEGLPLAVTIALAYSMKKMMKDNNLVRHLAACETMGSATAICSDKTGTLTQNVMSVVQGYIGEQRFNVRD 408 (941)
T ss_pred HHHHHHHhhCCCchHHHHHHHHHHHHHHHHhCCCEEechHHhhhccCceEEEEcCcCceeeceEEEEEEEEecceEecCc
Confidence 899999999999999999999999999999999999999999999999999999999999999999998754320 0000
Q ss_pred ccCCCch---HHHHHHhhccceEE-e-C----CcccCChHHHHHHhcccccccCCCccccCCCCCCcccEEEEecCCCCC
Q 001010 516 DMTKVPV---RTQEILASCHALVF-V-D----NKLVGDPLEKAALKGIDWSYKSDEKAMPKRGGGNAVQIVQRHHFASHL 586 (1191)
Q Consensus 516 ~~~~~~~---~~~~~la~chsl~~-~-~----~~~~GdPle~all~~~~~~~~~~~~~~~~~~~~~~~~il~~~~Fss~~ 586 (1191)
.....+. +.....+.|++... . + ....|||+|.|+++++.+.-. +... ....+++++.+||+|++
T Consensus 409 ~~~~~~~~~~~~l~~~~~~~s~~~~~~~~~~~~~~~g~p~e~All~~~~~~~~-~~~~-----~~~~~~~~~~~pF~s~~ 482 (941)
T TIGR01517 409 VLRNVPKHVRNILVEGISLNSSSEEVVDRGGKRAFIGSKTECALLGFLLLLGR-DYQE-----VRAEEKVVKIYPFNSER 482 (941)
T ss_pred ccccCCHHHHHHHHHHHHhCCCCccccCCCCccccCCCccHHHHHHHHHHcCC-CHHH-----HHhhchhccccccCCCC
Confidence 0011111 11222334444322 1 1 246899999999998754211 1000 01235678899999999
Q ss_pred CcEEEEEEeCC-eEEEEEeCcHHHHHHhccCC-------------hHHHHHHHHHHHHhcCeeeeEEEEeCCCCChhhhh
Q 001010 587 KRMSVVVRVQE-EFFAFVKGAPETIQDRLTDL-------------PSSYIETYKKYTHQGSRVLALAFKSLPDMTVSDAR 652 (1191)
Q Consensus 587 krmsvvv~~~~-~~~~~~KGapE~I~~~~~~~-------------p~~~~~~~~~~a~~G~RVLalA~k~l~~~~~~~~~ 652 (1191)
|||+++++.++ ++++++|||||.|.++|... .+++.+.+++|+++|+||+++|||.++..+..
T Consensus 483 k~msvv~~~~~~~~~~~~KGA~e~il~~c~~~~~~~g~~~~~~~~~~~i~~~~~~~a~~G~Rvl~~A~~~~~~~~~~--- 559 (941)
T TIGR01517 483 KFMSVVVKHSGGKVREFRKGASEIVLKPCRKRLDSNGEATPISDDKDRCADVIEPLASDALRTICLAYRDFAPEEFP--- 559 (941)
T ss_pred CeEEEEEEeCCCcEEEEEECChHHHHHhhhHHhhcCCCcccCcHHHHHHHHHHHHHHhcCCEEEEEEEEecCccccc---
Confidence 99999999754 58899999999999999531 24577788999999999999999998643221
Q ss_pred hccccccccCeEEeeeecccCcCCchhHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCcEEEeecCCCceeee
Q 001010 653 SLHRDEVENGLTFAGFAVFNCPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLILCPVKNGKVYEW 732 (1191)
Q Consensus 653 ~~~r~~~E~dL~flG~l~~~d~lK~da~~~I~~L~~agi~vvMiTGDn~~TA~~VA~~~gI~~~~~~il~~~~~~~~~~w 732 (1191)
..+..|+||+|+|+++|+||+|+|++++|++|+++||+++|+||||+.||.+||++|||.+++
T Consensus 560 --~~~~~e~~l~~lGli~~~Dplr~~~~~aI~~l~~aGI~v~miTGD~~~tA~~iA~~~GI~~~~--------------- 622 (941)
T TIGR01517 560 --RKDYPNGGLTLIGVVGIKDPLRPGVREAVQECQRAGITVRMVTGDNIDTAKAIARNCGILTFG--------------- 622 (941)
T ss_pred --cccccccCcEEEEEeeccCCCchhHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHcCCCCCC---------------
Confidence 123458999999999999999999999999999999999999999999999999999997321
Q ss_pred cCCCccccccCChHHHhcccccceEEEechhhhhhcchHHHHhhcCcceEEeecChhhHHHHHHHHhHcCCEEEEEcCCc
Q 001010 733 VSPDETEKIQYSEKEVEGLTDAHDLCIGGDCFEMLQQTSAVLRVIPYVKVFARVAPEQKELILTTFKAVGRMTLMCGDGT 812 (1191)
Q Consensus 733 ~~~d~~~~~~~~~~~~~~~~~~~~l~itG~~l~~l~~~~~~~~~l~~~~VfAR~sP~qK~~iV~~Lq~~g~~V~m~GDG~ 812 (1191)
..+++|+.++.+.+ +++.+++.++.||||++|+||.++|+.||+.|++|+|||||+
T Consensus 623 -----------------------~~vi~G~~~~~l~~-~el~~~i~~~~Vfar~sPe~K~~iV~~lq~~g~vVam~GDGv 678 (941)
T TIGR01517 623 -----------------------GLAMEGKEFRRLVY-EEMDPILPKLRVLARSSPLDKQLLVLMLKDMGEVVAVTGDGT 678 (941)
T ss_pred -----------------------ceEeeHHHhhhCCH-HHHHHHhccCeEEEECCHHHHHHHHHHHHHCCCEEEEECCCC
Confidence 24788888887654 568888899999999999999999999999999999999999
Q ss_pred cCHHHHhhCCceEEeccCCCccccccCCcccccccchhhhhccccccchhhhhhhhccCCCCCCccchhhhhhhcccccc
Q 001010 813 NDVGALKQAHVGVALLNAVPPTQSGNSSSEASKDENTKSVKSKKSKSASEAASKAMSLNSEGTSKGKASARLEANSRTAG 892 (1191)
Q Consensus 813 ND~~ALk~AdVGIAl~~~~~e~~~~asdi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 892 (1191)
||+||||+|||||||+.+++|++++++|+++++|
T Consensus 679 NDapALk~AdVGIAmg~~gtdvAk~aADivL~dd---------------------------------------------- 712 (941)
T TIGR01517 679 NDAPALKLADVGFSMGISGTEVAKEASDIILLDD---------------------------------------------- 712 (941)
T ss_pred chHHHHHhCCcceecCCCccHHHHHhCCEEEecC----------------------------------------------
Confidence 9999999999999999788888999999998766
Q ss_pred cccchHHHHHHHHHHHHHHHHhhcCCCCCCCccccCcccccCCCccCcCCccchhhhhhccchHHHHHHhhhHHHHHHHH
Q 001010 893 NRHLTAAEMQREKLKKMMEELNEEGDGRSAPIVKLGDASMASPFTAKHASVAPTTDIIRQGRSTLVTTLQMFKILGLNCL 972 (1191)
Q Consensus 893 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~klgdASiaaPFtsk~~~i~~v~~iir~GR~~Lvtt~~~fk~l~l~~l 972 (1191)
++++++++|++||++..+..+..++...+.+
T Consensus 713 -------------------------------------------------~f~~I~~~i~~gR~~~~ni~k~i~~~l~~n~ 743 (941)
T TIGR01517 713 -------------------------------------------------NFASIVRAVKWGRNVYDNIRKFLQFQLTVNV 743 (941)
T ss_pred -------------------------------------------------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4578899999999999988888777443333
Q ss_pred HHHH--HHHHhhhccccccchHHHHHhHHHH-HHHHHhhccCCCCccccCCCC---CCccchhhHHHHHHHHHHHHHHHH
Q 001010 973 ATAY--VLSVMYLDGVKLGDVQATISGVFTA-AFFLFISHARPLPTLSAARPH---PNIFCSYVFLSLMGQFAIHLFFLI 1046 (1191)
Q Consensus 973 i~~~--s~svly~~g~~~~d~Q~~~~~~l~~-~~~~~~s~~~p~~~Ls~~rP~---~~if~~~~~~si~~Q~~i~~~~l~ 1046 (1191)
.... .+..++.....++..|+++.++++. ++.++++..+|.+.+.+++|. .++++..++.++++|.+++.++.+
T Consensus 744 ~~i~~~~~~~~~~~~~pl~~~qil~inl~~d~~~al~l~~e~~~~~lm~~~P~~~~~~li~~~~~~~i~~~~~~~~~~~~ 823 (941)
T TIGR01517 744 VAVILTFVGSCISSTSPLTAVQLLWVNLIMDTLAALALATEPPTEALLDRKPIGRNAPLISRSMWKNILGQAGYQLVVTF 823 (941)
T ss_pred HHHHHHHHHHHHhccccHHHHHHHHHHHHHHHhhHHHHccCCccHHHHhCCCCCCCCCcCCHHHHHHHHHHHHHHHHHHH
Confidence 2211 1223444567899999999999987 478999999999999988886 479999999999999988887766
Q ss_pred HHhhhhcccCCCCCCCCCCCCCCcccchhhhHHHHHHHHhhheeE-ec-CCCcccccccchhHHHHHHHHHHHHHHhhcc
Q 001010 1047 SSVKEAEKYMPDECIEPDADFHPNLVNTVSYMVNMMIQVATFAVN-YM-GHPFNQSISENKPFMYALMGAVGFFTVITSD 1124 (1191)
Q Consensus 1047 ~~~~~~~~~~~~~~~~~~~~f~p~~~nt~vfl~~~~~~i~~~~v~-~~-g~Pf~~~~~~N~~~~~~l~~~~~~~~~~~~~ 1124 (1191)
..+...+.|......+.-..+.+...+|.+|....+.|+...... .. +.++.+++++|++++.++.+..++.++.
T Consensus 824 ~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~~v~~~~~~~~~~r~~~~~~~~~~~~~n~~~~~~~~~~~~l~~~~--- 900 (941)
T TIGR01517 824 ILLFAGGSIFDVSGPDEITSHQQGELNTIVFNTFVLLQLFNEINARKLYERNVFEGLFKNRIFVTIMGFTFGFQVII--- 900 (941)
T ss_pred HHHHHHHhhhcccCcccccccccchhhHHHHHHHHHHHHHHHHHHccCCcccccccccccHHHHHHHHHHHHHHHHH---
Confidence 555444433211100000012245678999988888887644332 32 2355559999999888787766666443
Q ss_pred cchhhhhccceeeCCh
Q 001010 1125 LLRSLNDWLKLVPLPS 1140 (1191)
Q Consensus 1125 ~~~~~~~~~~lv~~p~ 1140 (1191)
.|.++..|++.|++.
T Consensus 901 -~~~~~~~f~~~~l~~ 915 (941)
T TIGR01517 901 -VEFGGSFFSTVSLSI 915 (941)
T ss_pred -HHHHHHHhcccCCCH
Confidence 356788999999875
|
The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others. |
| >TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.5e-106 Score=1035.54 Aligned_cols=838 Identities=21% Similarity=0.250 Sum_probs=620.2
Q ss_pred ChhhhHHhhhhcC-CCCCHHHHHHHHhccCCCccCCCC-CcHHHHHHHHhhhHHHHHHHHHHHHHhhhhHHHHHHHHHHH
Q 001010 151 PTKETFGYYLKCT-GHSTEAKIAVATEKWGRNVFEYPQ-PTFQKLMKENCMEPFFVFQVFCVGLWCLDEYWYYSLFTLFM 228 (1191)
Q Consensus 151 ~~~~~~~~~~~~~-g~ls~~e~~~~~~~yG~N~i~i~~-~s~~~ll~~~~~~pf~vfqi~~v~lw~l~~y~~ysl~~l~m 228 (1191)
+.++.++.+.++. .|||++|+++|+++||+|+++.++ +++|.+|++++.+|+.++++++.++|++..+|.++++++++
T Consensus 11 ~~~~v~~~l~t~~~~GLs~~ea~~rl~~~G~N~l~~~~~~s~~~~~l~q~~~~~~~iL~~aails~~~~~~~~~~iIl~v 90 (1053)
T TIGR01523 11 IADEAAEFIGTSIPEGLTHDEAQHRLKEVGENRLEADSGIDAKAMLLHQVCNAMCMVLIIAAAISFAMHDWIEGGVISAI 90 (1053)
T ss_pred CHHHHHHHhCcCcccCCCHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHHhCHHHHHHHHHHHHHHHHhhHHHHHHHHhH
Confidence 4677788887763 577899999999999999999876 59999999999999999999999999988888888887777
Q ss_pred HHHHHHHHHHHHHHH---HHHHHhhccCCceEEEEECCEEEEEecCCCCCCcEEEEcCCCCCCCCCceeeeeEEEEec-c
Q 001010 229 LFMFESTMAKSRLKT---LTEIRRVRVDNQTIMVHRCGKWVKLAGTDLVPGDVVSIGRSSGQTGEDKSVPADMLILGG-S 304 (1191)
Q Consensus 229 ~vv~~~~~~~~~~r~---~~~l~~m~~~~~~v~V~R~g~~~~I~s~eLvpGDIV~l~~g~gd~~~~~~VPaD~iLl~G-~ 304 (1191)
+++......+|..|+ +++|++|. +.+++|+|||++++|+++||||||||.++.| ++|||||+|+++ +
T Consensus 91 v~in~~i~~~QE~~aekal~aL~~l~--~~~~~ViRdg~~~~I~a~eLVpGDIv~L~~G-------d~VPAD~rLi~~~~ 161 (1053)
T TIGR01523 91 IALNILIGFIQEYKAEKTMDSLKNLA--SPMAHVIRNGKSDAIDSHDLVPGDICLLKTG-------DTIPADLRLIETKN 161 (1053)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhccC--CCceEEEeCCeeeecCHhhCCCCCEEEECCC-------CEeeccEEEEEeCc
Confidence 776666666655544 45555543 5689999999999999999999999999987 899999999998 6
Q ss_pred eeeecccccCCCCceecccccCCCCccccccccCCCeeEeeceEEeecCCCCCCCCCCCCCcEEEEEEEecccchhhHHH
Q 001010 305 AIVNEAILTGESTPQWKVSIMGRETGEKLSARRDKSHVLFGGTKILQHTPDKTFPLKTPDGGCLAVVLRTGFETSQGKLM 384 (1191)
Q Consensus 305 ~~VdES~LTGES~Pv~K~~i~~~~~~~~~~~~~~k~~~lfaGT~vlq~~~~~~~~~~~~~g~~~~vV~~TG~~T~~Gkl~ 384 (1191)
+.||||+|||||.||.|.+.+....++. ...+++.|++|+||.|+ +|.+.|+|++||.+|..|++.
T Consensus 162 L~VDES~LTGES~pV~K~~~~~~~~~~~-~~~~d~~n~lf~GT~V~-------------~G~g~~vVvatG~~T~~GkIa 227 (1053)
T TIGR01523 162 FDTDEALLTGESLPVIKDAHATFGKEED-TPIGDRINLAFSSSAVT-------------KGRAKGICIATALNSEIGAIA 227 (1053)
T ss_pred eEEEchhhcCCCCceecccccccccccc-CCcccCCCccccCceEE-------------eeeEEEEEEEecCccHHHHHH
Confidence 9999999999999999986432111111 11246789999999999 799999999999999999999
Q ss_pred HHhcccc-----c------------------------------cccchhhhHHHHHHHHHHHHHHhhheeeeecccCCCc
Q 001010 385 RTILFST-----E------------------------------RVTANSWESGLFILFLVVFAVIAAGYVLKKGMEDPTR 429 (1191)
Q Consensus 385 r~i~~~~-----~------------------------------~~~~~~~~~~~fi~~lli~aii~~~~~~~~~~~~~~~ 429 (1191)
+.+...+ + ..++.++....+..++.+++++.+..++..+.. .
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tpLq~~l~~l~~~l~~i~~~~~~~~~~~~~~---~ 304 (1053)
T TIGR01523 228 AGLQGDGGLFQRPEKDDPNKRRKLNKWILKVTKKVTGAFLGLNVGTPLHRKLSKLAVILFCIAIIFAIIVMAAHKF---D 304 (1053)
T ss_pred HHHhhhhhccccccccccccchhhhcccccccccchhhccccCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhh---h
Confidence 9874321 1 125666666555555544444433332222211 1
Q ss_pred chhHHHHHHHHhhhhccCCCcchHHHHHHHHHHHHHHhcCccccCCCcccccCCccEEEecccccccCCceEEEEEeecC
Q 001010 430 SKYKLFLSCSLIITSVIPPELPMELSIAVNTSLIALARRGIFCTEPFRIPFAGKVDMCCFDKTGTLTSDDMEFRGVVGLS 509 (1191)
Q Consensus 430 ~~~~~~l~~i~iit~~vP~~LP~~lslav~~s~~~L~k~~I~~~~p~~i~~~G~vd~icfDKTGTLT~~~l~v~gv~~~~ 509 (1191)
.....++.++.+++++||++||+.++++++.+..||+|++++++++.++|.+|+++++|+|||||||+|+|+|..++..+
T Consensus 305 ~~~~~~~~av~l~Va~VPegLp~~vti~La~g~~rMak~~~lVr~L~avEtLG~vtvICsDKTGTLT~N~M~V~~i~~~~ 384 (1053)
T TIGR01523 305 VDKEVAIYAICLAISIIPESLIAVLSITMAMGAANMSKRNVIVRKLDALEALGAVNDICSDKTGTITQGKMIARQIWIPR 384 (1053)
T ss_pred hhHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHHHhcCCEeccchhhhhccCccEEEecCcCccccceEEEEEEEEcC
Confidence 12345667889999999999999999999999999999999999999999999999999999999999999999886421
Q ss_pred -------C--Cccccc--------------------------------cC--CCc--------hHHHHHHhhccceEEeC
Q 001010 510 -------N--AELEDD--------------------------------MT--KVP--------VRTQEILASCHALVFVD 538 (1191)
Q Consensus 510 -------~--~~~~~~--------------------------------~~--~~~--------~~~~~~la~chsl~~~~ 538 (1191)
+ ....++ .. +.+ .......+.||+....+
T Consensus 385 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~lcn~a~~~~ 464 (1053)
T TIGR01523 385 FGTISIDNSDDAFNPNEGNVSGIPRFSPYEYSHNEAADQDILKEFKDELKEIDLPEDIDMDLFIKLLETAALANIATVFK 464 (1053)
T ss_pred CceEEecCCCCCCCCcccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHhccCCeeec
Confidence 0 000000 00 000 12344567788766432
Q ss_pred ----C--cccCChHHHHHHhccc-ccccCC-----Ccccc-------------CCCCCCcccEEEEecCCCCCCcEEEEE
Q 001010 539 ----N--KLVGDPLEKAALKGID-WSYKSD-----EKAMP-------------KRGGGNAVQIVQRHHFASHLKRMSVVV 593 (1191)
Q Consensus 539 ----~--~~~GdPle~all~~~~-~~~~~~-----~~~~~-------------~~~~~~~~~il~~~~Fss~~krmsvvv 593 (1191)
+ ...|||+|.|+++++. +.+... ..... .++....+++++++||+|++||||+++
T Consensus 465 ~~~~~~~~~~GdptE~ALl~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pFds~rK~msvv~ 544 (1053)
T TIGR01523 465 DDATDCWKAHGDPTEIAIHVFAKKFDLPHNALTGEEDLLKSNENDQSSLSQHNEKPGSAQFEFIAEFPFDSEIKRMASIY 544 (1053)
T ss_pred cCCCCceeeCcCccHHHHHHHHHHcCCCcccccchhhhhhhccccccccccccccccccccceEEEeccCCCCCeEEEEE
Confidence 2 4679999999998753 222100 00000 001124578999999999999999999
Q ss_pred EeC-C-eEEEEEeCcHHHHHHhccCC---------------hHHHHHHHHHHHHhcCeeeeEEEEeCCCCChh--hh--h
Q 001010 594 RVQ-E-EFFAFVKGAPETIQDRLTDL---------------PSSYIETYKKYTHQGSRVLALAFKSLPDMTVS--DA--R 652 (1191)
Q Consensus 594 ~~~-~-~~~~~~KGapE~I~~~~~~~---------------p~~~~~~~~~~a~~G~RVLalA~k~l~~~~~~--~~--~ 652 (1191)
+.+ + ++++++|||||.|.++|... ++.+.+..++|+++|+||||+|||.++..+.. .. .
T Consensus 545 ~~~~~~~~~~~~KGApe~il~~c~~~~~~~~~~~~~l~~~~~~~i~~~~~~~a~~GlRvLa~A~r~l~~~~~~~~~~~~~ 624 (1053)
T TIGR01523 545 EDNHGETYNIYAKGAFERIIECCSSSNGKDGVKISPLEDCDRELIIANMESLAAEGLRVLAFASKSFDKADNNDDQLKNE 624 (1053)
T ss_pred EeCCCCEEEEEEeCChHHHHHhhhHhhcCCCCccccCCHHHHHHHHHHHHHHHhcCCeEEEEEEEECCchhccchhhhcc
Confidence 875 3 47899999999999999521 24566778899999999999999998643211 11 1
Q ss_pred hccccccccCeEEeeeecccCcCCchhHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCcEEEeecCCCceeee
Q 001010 653 SLHRDEVENGLTFAGFAVFNCPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLILCPVKNGKVYEW 732 (1191)
Q Consensus 653 ~~~r~~~E~dL~flG~l~~~d~lK~da~~~I~~L~~agi~vvMiTGDn~~TA~~VA~~~gI~~~~~~il~~~~~~~~~~w 732 (1191)
..+|+.+|+||+|+|+++|+||+|+|++++|++|+++||+|+|+||||+.||.+||++|||.+.+.....
T Consensus 625 ~~~~~~~e~~L~~~G~~~~~Dp~r~~v~~aI~~l~~aGIkv~MiTGD~~~tA~~iA~~~Gi~~~~~~~~~---------- 694 (1053)
T TIGR01523 625 TLNRATAESDLEFLGLIGIYDPPRNESAGAVEKCHQAGINVHMLTGDFPETAKAIAQEVGIIPPNFIHDR---------- 694 (1053)
T ss_pred ccchhhhccCCEEEEEEeeecCCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCccccccc----------
Confidence 1246778999999999999999999999999999999999999999999999999999999743211000
Q ss_pred cCCCccccccCChHHHhcccccceEEEechhhhhhcchHHHHhhcCcceEEeecChhhHHHHHHHHhHcCCEEEEEcCCc
Q 001010 733 VSPDETEKIQYSEKEVEGLTDAHDLCIGGDCFEMLQQTSAVLRVIPYVKVFARVAPEQKELILTTFKAVGRMTLMCGDGT 812 (1191)
Q Consensus 733 ~~~d~~~~~~~~~~~~~~~~~~~~l~itG~~l~~l~~~~~~~~~l~~~~VfAR~sP~qK~~iV~~Lq~~g~~V~m~GDG~ 812 (1191)
++ .....++||+.++.+.+ .++.+++.++.||||++|+||.++|+.||+.|++|+|+|||+
T Consensus 695 ---~~---------------~~~~~vitG~~l~~l~~-~~l~~~~~~~~V~ar~sP~~K~~iV~~lq~~g~~Vam~GDGv 755 (1053)
T TIGR01523 695 ---DE---------------IMDSMVMTGSQFDALSD-EEVDDLKALCLVIARCAPQTKVKMIEALHRRKAFCAMTGDGV 755 (1053)
T ss_pred ---cc---------------cccceeeehHHhhhcCH-HHHHHHhhcCeEEEecCHHHHHHHHHHHHhcCCeeEEeCCCc
Confidence 00 01247999999998865 567778888999999999999999999999999999999999
Q ss_pred cCHHHHhhCCceEEeccCCCccccccCCcccccccchhhhhccccccchhhhhhhhccCCCCCCccchhhhhhhcccccc
Q 001010 813 NDVGALKQAHVGVALLNAVPPTQSGNSSSEASKDENTKSVKSKKSKSASEAASKAMSLNSEGTSKGKASARLEANSRTAG 892 (1191)
Q Consensus 813 ND~~ALk~AdVGIAl~~~~~e~~~~asdi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 892 (1191)
||+||||+|||||||+.++++++++++|+++.+|
T Consensus 756 NDapaLk~AdVGIAmg~~gt~vak~aADivl~dd---------------------------------------------- 789 (1053)
T TIGR01523 756 NDSPSLKMANVGIAMGINGSDVAKDASDIVLSDD---------------------------------------------- 789 (1053)
T ss_pred chHHHHHhCCccEecCCCccHHHHHhcCEEEecC----------------------------------------------
Confidence 9999999999999999888888899998888666
Q ss_pred cccchHHHHHHHHHHHHHHHHhhcCCCCCCCccccCcccccCCCccCcCCccchhhhhhccchHHHHHHhhhHHHHHHHH
Q 001010 893 NRHLTAAEMQREKLKKMMEELNEEGDGRSAPIVKLGDASMASPFTAKHASVAPTTDIIRQGRSTLVTTLQMFKILGLNCL 972 (1191)
Q Consensus 893 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~klgdASiaaPFtsk~~~i~~v~~iir~GR~~Lvtt~~~fk~l~l~~l 972 (1191)
+++++.++|++||.+....-....|+.-.++
T Consensus 790 -------------------------------------------------~f~~I~~~i~~gR~~~~ni~k~i~y~l~~ni 820 (1053)
T TIGR01523 790 -------------------------------------------------NFASILNAIEEGRRMFDNIMKFVLHLLAENV 820 (1053)
T ss_pred -------------------------------------------------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhH
Confidence 4567888999999999877666665432222
Q ss_pred HHHHHH--HHhhh--cc---ccccchHHHHHhHHHH-HHHHHhhccCCCCccccCCCC---CCccchhhHHHHHHHHHHH
Q 001010 973 ATAYVL--SVMYL--DG---VKLGDVQATISGVFTA-AFFLFISHARPLPTLSAARPH---PNIFCSYVFLSLMGQFAIH 1041 (1191)
Q Consensus 973 i~~~s~--svly~--~g---~~~~d~Q~~~~~~l~~-~~~~~~s~~~p~~~Ls~~rP~---~~if~~~~~~si~~Q~~i~ 1041 (1191)
.....+ ..++. .| ..++..|++|.++++. ++.+.++..+|.+.+-+++|. .+||+..++..++.+.++.
T Consensus 821 ~~i~~~~~~~~~~~~~g~~~~Pl~~~qiL~inli~d~~palaL~~e~~~~~~m~~~Pr~~~~~l~~~~~~~~~~~~g~~~ 900 (1053)
T TIGR01523 821 AEAILLIIGLAFRDENGKSVFPLSPVEILWCIMITSCFPAMGLGLEKAAPDLMDRLPHDNEVGIFQKELIIDMFAYGFFL 900 (1053)
T ss_pred HHHHHHHHHHHHhcccCCCcCchHHHHHHHHHHHHHHHHHHhhccCCCChhHHhcCCCCCCccccCHHHHHHHHHHHHHH
Confidence 221111 11221 13 3688999999999985 688999999999999988885 5699988777666665554
Q ss_pred HHHHHHHhhhh-cccCCCC-CCCCCCCCCC-----cccchhhhHHHHHHHHhh-heeEecCC----------------Cc
Q 001010 1042 LFFLISSVKEA-EKYMPDE-CIEPDADFHP-----NLVNTVSYMVNMMIQVAT-FAVNYMGH----------------PF 1097 (1191)
Q Consensus 1042 ~~~l~~~~~~~-~~~~~~~-~~~~~~~f~p-----~~~nt~vfl~~~~~~i~~-~~v~~~g~----------------Pf 1097 (1191)
.+.-+..+.+. ..+.+.. ..+-+..+.+ ..-.|..|....+.|+.. +.+-+... +|
T Consensus 901 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~t~~f~~l~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~ 980 (1053)
T TIGR01523 901 GGSCLASFTGILYGFGSGNLGHDCDAHYHAGCNDVFKARSAAFATMTFCALILAVEVKDFDNSFFNLHGIPDGDSNFKEF 980 (1053)
T ss_pred HHHHHHHHHHHHHhccCccccccccccccccccchhhhHHHHHHHHHHHHHHHHHHHhcCchhhhhcCcccccccccccc
Confidence 33322221111 1110000 0000000111 123467777777777643 23222222 23
Q ss_pred ccccccchhHHHHHHHHHHHHHHhhcccchhhhh-ccceeeCCh
Q 001010 1098 NQSISENKPFMYALMGAVGFFTVITSDLLRSLND-WLKLVPLPS 1140 (1191)
Q Consensus 1098 ~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~-~~~lv~~p~ 1140 (1191)
..++++|+++++++++..++.++.+ ++|.++. .|+..|++.
T Consensus 981 ~~~~~~N~~l~~~~~~~~~l~~~~~--~~p~~~~~~f~~~~l~~ 1022 (1053)
T TIGR01523 981 FHSIVENKFLAWAIAFAAVSAFPTI--YIPVINDDVFKHKPIGA 1022 (1053)
T ss_pred ccCCccCHHHHHHHHHHHHHHHHHH--hhhhhhhhhhccCCcch
Confidence 3347899999999888777766553 5789996 999999984
|
The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump. |
| >PRK10517 magnesium-transporting ATPase MgtA; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.1e-104 Score=1006.61 Aligned_cols=800 Identities=21% Similarity=0.246 Sum_probs=599.4
Q ss_pred ChhhhHHhhhhcCCCCCHHHHHHHHhccCCCccCCCCC-cHHHHHHHHhhhHHHHHHHHH-HHHHhhhhHHHHHHHHHHH
Q 001010 151 PTKETFGYYLKCTGHSTEAKIAVATEKWGRNVFEYPQP-TFQKLMKENCMEPFFVFQVFC-VGLWCLDEYWYYSLFTLFM 228 (1191)
Q Consensus 151 ~~~~~~~~~~~~~g~ls~~e~~~~~~~yG~N~i~i~~~-s~~~ll~~~~~~pf~vfqi~~-v~lw~l~~y~~ysl~~l~m 228 (1191)
+.++.++.+.++..|||++|+++|+++||+|+++.+++ ++|++|++++.+||+++++++ ++.|++++| ..+++++++
T Consensus 53 ~~~~v~~~l~~~~~GLs~~ea~~r~~~~G~N~l~~~~~~s~~~~~~~~~~~p~~~lL~~aa~ls~~~~~~-~~a~~I~~i 131 (902)
T PRK10517 53 PEEELWKTFDTHPEGLNEAEVESAREQHGENELPAQKPLPWWVHLWVCYRNPFNILLTILGAISYATEDL-FAAGVIALM 131 (902)
T ss_pred CHHHHHHHhCCCCCCCCHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHhHHHHHHHHHHHHHHHHccH-HHHHHHHHH
Confidence 45667888877766889999999999999999998876 799999999999999887665 555666665 466666666
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcc-CCceEEEEEC------CEEEEEecCCCCCCcEEEEcCCCCCCCCCceeeeeEEEE
Q 001010 229 LFMFESTMAKSRLKTLTEIRRVRV-DNQTIMVHRC------GKWVKLAGTDLVPGDVVSIGRSSGQTGEDKSVPADMLIL 301 (1191)
Q Consensus 229 ~vv~~~~~~~~~~r~~~~l~~m~~-~~~~v~V~R~------g~~~~I~s~eLvpGDIV~l~~g~gd~~~~~~VPaD~iLl 301 (1191)
+++......+|..|+.+.++++.. .+.+++|+|| |+|++|+++||||||+|.+++| ++|||||+|+
T Consensus 132 v~i~~~i~~~qe~ra~~~~~~L~~l~~~~a~ViR~g~~~~~g~~~~I~~~eLvpGDiV~l~~G-------d~IPaDg~li 204 (902)
T PRK10517 132 VAISTLLNFIQEARSTKAADALKAMVSNTATVLRVINDKGENGWLEIPIDQLVPGDIIKLAAG-------DMIPADLRIL 204 (902)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEECCccCCCCeEEEEEHHhCCCCCEEEECCC-------CEEeeeEEEE
Confidence 666666666666666555544433 3678999999 7899999999999999999987 7999999999
Q ss_pred ecc-eeeecccccCCCCceecccccCCCCccccccccCCCeeEeeceEEeecCCCCCCCCCCCCCcEEEEEEEecccchh
Q 001010 302 GGS-AIVNEAILTGESTPQWKVSIMGRETGEKLSARRDKSHVLFGGTKILQHTPDKTFPLKTPDGGCLAVVLRTGFETSQ 380 (1191)
Q Consensus 302 ~G~-~~VdES~LTGES~Pv~K~~i~~~~~~~~~~~~~~k~~~lfaGT~vlq~~~~~~~~~~~~~g~~~~vV~~TG~~T~~ 380 (1191)
+|+ +.||||+|||||.|+.|.+....+.+. ...+++|.+|+||.|+ +|.+.++|++||.+|..
T Consensus 205 ~g~~l~VDES~LTGES~PV~K~~~~~~~~~~---~~~~~~n~vfaGT~V~-------------~G~~~~vV~atG~~T~~ 268 (902)
T PRK10517 205 QARDLFVAQASLTGESLPVEKFATTRQPEHS---NPLECDTLCFMGTNVV-------------SGTAQAVVIATGANTWF 268 (902)
T ss_pred EcCceEEEecCcCCCCCceeccccccccccc---CccccccceeeCceEe-------------eeeEEEEEEEeccccHH
Confidence 996 799999999999999998743221111 1135789999999999 89999999999999999
Q ss_pred hHHHHHhccccccccchhhhHHHHH----HHHHHHHHHhhheeeeecccCCCcchhHHHHHHHHhhhhccCCCcchHHHH
Q 001010 381 GKLMRTILFSTERVTANSWESGLFI----LFLVVFAVIAAGYVLKKGMEDPTRSKYKLFLSCSLIITSVIPPELPMELSI 456 (1191)
Q Consensus 381 Gkl~r~i~~~~~~~~~~~~~~~~fi----~~lli~aii~~~~~~~~~~~~~~~~~~~~~l~~i~iit~~vP~~LP~~lsl 456 (1191)
|++.+.+....+..++.++....+. .+.++++.+.+.+.+.. ..++...++.++.+++++|||+||+++++
T Consensus 269 GkI~~~v~~~~~~~t~lq~~~~~i~~~l~~~~~~~~~~v~~i~~~~-----~~~~~~~l~~alsv~V~~~Pe~LP~~vt~ 343 (902)
T PRK10517 269 GQLAGRVSEQDSEPNAFQQGISRVSWLLIRFMLVMAPVVLLINGYT-----KGDWWEAALFALSVAVGLTPEMLPMIVTS 343 (902)
T ss_pred HHHHHHhhccCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhhHHHHh-----cCCHHHHHHHHHHHHHHHcccHHHHHHHH
Confidence 9999999877666677665544433 33333333222221111 12456678889999999999999999999
Q ss_pred HHHHHHHHHHhcCccccCCCcccccCCccEEEecccccccCCceEEEEEeecCCCccccccCCCchHHHHHHhhccceEE
Q 001010 457 AVNTSLIALARRGIFCTEPFRIPFAGKVDMCCFDKTGTLTSDDMEFRGVVGLSNAELEDDMTKVPVRTQEILASCHALVF 536 (1191)
Q Consensus 457 av~~s~~~L~k~~I~~~~p~~i~~~G~vd~icfDKTGTLT~~~l~v~gv~~~~~~~~~~~~~~~~~~~~~~la~chsl~~ 536 (1191)
+++.+..+|+|+|++++++.++|.+|++|++|||||||||+|+|.+..+....+. ...+.....+.|...
T Consensus 344 ~la~g~~~mak~~ilVk~l~aiE~lg~v~vic~DKTGTLT~n~m~V~~~~~~~~~--------~~~~ll~~a~l~~~~-- 413 (902)
T PRK10517 344 TLARGAVKLSKQKVIVKRLDAIQNFGAMDILCTDKTGTLTQDKIVLENHTDISGK--------TSERVLHSAWLNSHY-- 413 (902)
T ss_pred HHHHHHHHHHhCCcEEecchhhhhccCCCEEEecCCCccccceEEEEEEecCCCC--------CHHHHHHHHHhcCCc--
Confidence 9999999999999999999999999999999999999999999999987533220 011222222222211
Q ss_pred eCCcccCChHHHHHHhcccccccCCCccccCCCCCCcccEEEEecCCCCCCcEEEEEEeC-CeEEEEEeCcHHHHHHhcc
Q 001010 537 VDNKLVGDPLEKAALKGIDWSYKSDEKAMPKRGGGNAVQIVQRHHFASHLKRMSVVVRVQ-EEFFAFVKGAPETIQDRLT 615 (1191)
Q Consensus 537 ~~~~~~GdPle~all~~~~~~~~~~~~~~~~~~~~~~~~il~~~~Fss~~krmsvvv~~~-~~~~~~~KGapE~I~~~~~ 615 (1191)
. +..|||+|.|++++..... .. .....++.++.+||+|++|||+++++.. +.+.+++|||||.|.++|.
T Consensus 414 ~--~~~~~p~d~All~~a~~~~-----~~---~~~~~~~~~~~~pFds~~k~msvvv~~~~~~~~~~~KGa~e~il~~c~ 483 (902)
T PRK10517 414 Q--TGLKNLLDTAVLEGVDEES-----AR---SLASRWQKIDEIPFDFERRRMSVVVAENTEHHQLICKGALEEILNVCS 483 (902)
T ss_pred C--CCCCCHHHHHHHHHHHhcc-----hh---hhhhcCceEEEeeeCCCcceEEEEEEECCCeEEEEEeCchHHHHHhch
Confidence 1 2269999999998764211 00 0113467788999999999999998754 4578999999999999995
Q ss_pred CC-------------hHHHHHHHHHHHHhcCeeeeEEEEeCCCCChhhhhhccccccccCeEEeeeecccCcCCchhHHH
Q 001010 616 DL-------------PSSYIETYKKYTHQGSRVLALAFKSLPDMTVSDARSLHRDEVENGLTFAGFAVFNCPIREDSAKI 682 (1191)
Q Consensus 616 ~~-------------p~~~~~~~~~~a~~G~RVLalA~k~l~~~~~~~~~~~~r~~~E~dL~flG~l~~~d~lK~da~~~ 682 (1191)
.. .+.+.+..++++++|+||+++|||+++.... ...+ ..|+|++|+|+++|+||+|||++++
T Consensus 484 ~~~~~~~~~~l~~~~~~~i~~~~~~~a~~G~rvlavA~k~~~~~~~----~~~~-~~e~~l~~lGli~~~Dp~R~~a~~a 558 (902)
T PRK10517 484 QVRHNGEIVPLDDIMLRRIKRVTDTLNRQGLRVVAVATKYLPAREG----DYQR-ADESDLILEGYIAFLDPPKETTAPA 558 (902)
T ss_pred hhhcCCCeecCCHHHHHHHHHHHHHHHhcCCEEEEEEEecCCcccc----cccc-ccccCceeeehHhhhCcchhhHHHH
Confidence 31 2345566788999999999999998864221 1112 2378999999999999999999999
Q ss_pred HHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCcEEEeecCCCceeeecCCCccccccCChHHHhcccccceEEEech
Q 001010 683 LSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLTDAHDLCIGGD 762 (1191)
Q Consensus 683 I~~L~~agi~vvMiTGDn~~TA~~VA~~~gI~~~~~~il~~~~~~~~~~w~~~d~~~~~~~~~~~~~~~~~~~~l~itG~ 762 (1191)
|++|+++||+|+|+||||+.||.+||+++||.+ +-+++|.
T Consensus 559 I~~l~~aGI~v~miTGD~~~tA~~IA~~lGI~~----------------------------------------~~v~~G~ 598 (902)
T PRK10517 559 LKALKASGVTVKILTGDSELVAAKVCHEVGLDA----------------------------------------GEVLIGS 598 (902)
T ss_pred HHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCc----------------------------------------cCceeHH
Confidence 999999999999999999999999999999941 1256788
Q ss_pred hhhhhcchHHHHhhcCcceEEeecChhhHHHHHHHHhHcCCEEEEEcCCccCHHHHhhCCceEEeccCCCccccccCCcc
Q 001010 763 CFEMLQQTSAVLRVIPYVKVFARVAPEQKELILTTFKAVGRMTLMCGDGTNDVGALKQAHVGVALLNAVPPTQSGNSSSE 842 (1191)
Q Consensus 763 ~l~~l~~~~~~~~~l~~~~VfAR~sP~qK~~iV~~Lq~~g~~V~m~GDG~ND~~ALk~AdVGIAl~~~~~e~~~~asdi~ 842 (1191)
.++.+.+ +++.+.++++.||||++|+||.++|+.||+.|++|+|+|||+||+||||+|||||||+ +++|++++++|++
T Consensus 599 el~~l~~-~el~~~~~~~~VfAr~sPe~K~~IV~~Lq~~G~vVam~GDGvNDaPALk~ADVGIAmg-~gtdvAkeaADiV 676 (902)
T PRK10517 599 DIETLSD-DELANLAERTTLFARLTPMHKERIVTLLKREGHVVGFMGDGINDAPALRAADIGISVD-GAVDIAREAADII 676 (902)
T ss_pred HHHhCCH-HHHHHHHhhCcEEEEcCHHHHHHHHHHHHHCCCEEEEECCCcchHHHHHhCCEEEEeC-CcCHHHHHhCCEE
Confidence 8887654 5688888999999999999999999999999999999999999999999999999999 6789999999999
Q ss_pred cccccchhhhhccccccchhhhhhhhccCCCCCCccchhhhhhhcccccccccchHHHHHHHHHHHHHHHHhhcCCCCCC
Q 001010 843 ASKDENTKSVKSKKSKSASEAASKAMSLNSEGTSKGKASARLEANSRTAGNRHLTAAEMQREKLKKMMEELNEEGDGRSA 922 (1191)
Q Consensus 843 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 922 (1191)
+.+|
T Consensus 677 Lldd---------------------------------------------------------------------------- 680 (902)
T PRK10517 677 LLEK---------------------------------------------------------------------------- 680 (902)
T ss_pred EecC----------------------------------------------------------------------------
Confidence 9776
Q ss_pred CccccCcccccCCCccCcCCccchhhhhhccchHHHHHHhhhHHHHHHHHHHHHHHHH--hhhccccccchHHHHHhHHH
Q 001010 923 PIVKLGDASMASPFTAKHASVAPTTDIIRQGRSTLVTTLQMFKILGLNCLATAYVLSV--MYLDGVKLGDVQATISGVFT 1000 (1191)
Q Consensus 923 ~~~klgdASiaaPFtsk~~~i~~v~~iir~GR~~Lvtt~~~fk~l~l~~li~~~s~sv--ly~~g~~~~d~Q~~~~~~l~ 1000 (1191)
|++++++.|++||++..+..+..++..-..+-..+++.+ +.+....+...|++|.++++
T Consensus 681 -------------------~~~~I~~ai~~gR~i~~nI~k~i~~~ls~n~~~v~~~~~~~~~~~~~pl~~~qiL~inl~~ 741 (902)
T PRK10517 681 -------------------SLMVLEEGVIEGRRTFANMLKYIKMTASSNFGNVFSVLVASAFLPFLPMLPLHLLIQNLLY 741 (902)
T ss_pred -------------------ChHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHH
Confidence 456788999999999999888887755444444333332 33333678999999999999
Q ss_pred HHHHHHhhccCCCCccccCCCCCC--ccchhh-HHHHHHHHHHHHHHHHHHhhhhcccCCCCCCCCCCCCCCcccchhhh
Q 001010 1001 AAFFLFISHARPLPTLSAARPHPN--IFCSYV-FLSLMGQFAIHLFFLISSVKEAEKYMPDECIEPDADFHPNLVNTVSY 1077 (1191)
Q Consensus 1001 ~~~~~~~s~~~p~~~Ls~~rP~~~--if~~~~-~~si~~Q~~i~~~~l~~~~~~~~~~~~~~~~~~~~~f~p~~~nt~vf 1077 (1191)
.++.+.++..+|.+.+-+++|..+ .+...+ +..++ ..++.++.+.+.+... .+ + .. + .-+...|+.|
T Consensus 742 D~~~~al~~d~~~~~~m~~p~r~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~-~~-~----~~--~-~~~~~~~~~F 811 (902)
T PRK10517 742 DVSQVAIPFDNVDDEQIQKPQRWNPADLGRFMVFFGPI-SSIFDILTFCLMWWVF-HA-N----TP--E-TQTLFQSGWF 811 (902)
T ss_pred HHhHHhhcCCCCChhhhcCCCCCCHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHc-cc-c----ch--h-hHhHHHHHHH
Confidence 988899999999988875544412 111111 11111 1112222221111110 00 0 00 0 0123445668
Q ss_pred HHHHHHHHhhheeEecCCCcccccccchhHHHHHHHHHHHHHHhhcccchhhhhccceeeCChhHHHHHHHHHHHHH
Q 001010 1078 MVNMMIQVATFAVNYMGHPFNQSISENKPFMYALMGAVGFFTVITSDLLRSLNDWLKLVPLPSGLRDKLLIWAGLMF 1154 (1191)
Q Consensus 1078 l~~~~~~i~~~~v~~~g~Pf~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~lv~~p~~~~~~l~~~~~~~~ 1154 (1191)
+...+.|+.... |.+ -.+.++++|++++..+++..++.++.+.-+++.++.+|++.++|..+..+++.+.+...
T Consensus 812 ~~~~~~q~~~~~-~~R--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 885 (902)
T PRK10517 812 VVGLLSQTLIVH-MIR--TRRIPFIQSRAAWPLMIMTLIVMAVGIALPFSPLASYLQLQALPLSYFPWLVAILAGYM 885 (902)
T ss_pred HHHHHHHHHHHH-hhc--cCCCCcccchHHHHHHHHHHHHHHHHHHhhHHHHHHhhCCcCCChhHHHHHHHHHHHHH
Confidence 887777765332 222 12347789999988888877777766554455899999999999655555555544433
|
|
| >TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-103 Score=1018.53 Aligned_cols=861 Identities=19% Similarity=0.221 Sum_probs=625.4
Q ss_pred ChhhhHHhhhhc-CCCCCHHHHHHHHhccCCCccCCCCC-cHHHHHHHHhhhHHHHHHHHHHHH-Hhhh-----------
Q 001010 151 PTKETFGYYLKC-TGHSTEAKIAVATEKWGRNVFEYPQP-TFQKLMKENCMEPFFVFQVFCVGL-WCLD----------- 216 (1191)
Q Consensus 151 ~~~~~~~~~~~~-~g~ls~~e~~~~~~~yG~N~i~i~~~-s~~~ll~~~~~~pf~vfqi~~v~l-w~l~----------- 216 (1191)
+.++.++.+.++ ..||+++|+++|+++||+|+++.+++ ++|.+|++++++||.+.++++.++ +++.
T Consensus 21 ~~~~~~~~l~t~~~~GLs~~e~~~rl~~~G~N~l~~~~~~~~~~~~l~~~~~~~~~iL~~aa~l~~~~~~~~~~~~~~~~ 100 (997)
T TIGR01106 21 SLDELERKYGTDLSKGLSAARAAEILARDGPNALTPPPTTPEWVKFCRQLFGGFSMLLWIGAILCFLAYGIQASTEEEPQ 100 (997)
T ss_pred CHHHHHHHhCcCcccCCCHHHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHhcchHHHHHHHHHHHHHHHHHhhccCCCcc
Confidence 456677777766 34778899999999999999987664 799999999999999888777666 4331
Q ss_pred -hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc-CCceEEEEECCEEEEEecCCCCCCcEEEEcCCCCCCCCCcee
Q 001010 217 -EYWYYSLFTLFMLFMFESTMAKSRLKTLTEIRRVRV-DNQTIMVHRCGKWVKLAGTDLVPGDVVSIGRSSGQTGEDKSV 294 (1191)
Q Consensus 217 -~y~~ysl~~l~m~vv~~~~~~~~~~r~~~~l~~m~~-~~~~v~V~R~g~~~~I~s~eLvpGDIV~l~~g~gd~~~~~~V 294 (1191)
++|+.++++++++++......++..|+.+.++++.. .+..++|+|||++++|+++||||||+|.+++| ++|
T Consensus 101 ~~~~~~~~~i~~vv~i~~~i~~~qe~ka~~~l~~l~~~~~~~~~ViRdg~~~~I~~~~lv~GDiv~l~~G-------d~I 173 (997)
T TIGR01106 101 NDNLYLGVVLSAVVIITGCFSYYQEAKSSKIMESFKNMVPQQALVIRDGEKMSINAEQVVVGDLVEVKGG-------DRI 173 (997)
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCeeEEEECCEEEEeeHHHCCCCCEEEECCC-------CEE
Confidence 356677766666665555566777666666666554 47799999999999999999999999999987 899
Q ss_pred eeeEEEEecc-eeeecccccCCCCceecccccCCCCccccccccCCCeeEeeceEEeecCCCCCCCCCCCCCcEEEEEEE
Q 001010 295 PADMLILGGS-AIVNEAILTGESTPQWKVSIMGRETGEKLSARRDKSHVLFGGTKILQHTPDKTFPLKTPDGGCLAVVLR 373 (1191)
Q Consensus 295 PaD~iLl~G~-~~VdES~LTGES~Pv~K~~i~~~~~~~~~~~~~~k~~~lfaGT~vlq~~~~~~~~~~~~~g~~~~vV~~ 373 (1191)
||||+|++|+ +.||||+|||||.|+.|.+... .+..+ +..|++|+||.|+ +|.+.++|++
T Consensus 174 PaD~~il~~~~l~VdeS~LTGES~pv~K~~~~~--~~~~~----~~~n~l~~Gt~v~-------------~G~~~~~V~~ 234 (997)
T TIGR01106 174 PADLRIISAQGCKVDNSSLTGESEPQTRSPEFT--HENPL----ETRNIAFFSTNCV-------------EGTARGIVVN 234 (997)
T ss_pred eeeEEEEEccCcEEEccccCCCCCceeccCCCc--ccCcc----ccCCeEEeccEee-------------eeeEEEEEEE
Confidence 9999999995 8999999999999999986321 11111 4578999999999 7999999999
Q ss_pred ecccchhhHHHHHhccccccccchhhhHHHHHH----HHHHHHHHhhheeeeecccCCCcchhHHHHHHHHhhhhccCCC
Q 001010 374 TGFETSQGKLMRTILFSTERVTANSWESGLFIL----FLVVFAVIAAGYVLKKGMEDPTRSKYKLFLSCSLIITSVIPPE 449 (1191)
Q Consensus 374 TG~~T~~Gkl~r~i~~~~~~~~~~~~~~~~fi~----~lli~aii~~~~~~~~~~~~~~~~~~~~~l~~i~iit~~vP~~ 449 (1191)
||.+|..|++.+.+....++.++.++....+.. +.++++++.+.+++..+ ..+...+..++.+++++|||+
T Consensus 235 tG~~T~~g~i~~~~~~~~~~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~i~v~v~~iP~~ 309 (997)
T TIGR01106 235 TGDRTVMGRIASLASGLENGKTPIAIEIEHFIHIITGVAVFLGVSFFILSLILG-----YTWLEAVIFLIGIIVANVPEG 309 (997)
T ss_pred ccccchhhHHHhhhhhcccCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-----CCHHHHHHHHHHHHhhcCCcc
Confidence 999999999999876655555655544433332 22233332222222222 245567777888999999999
Q ss_pred cchHHHHHHHHHHHHHHhcCccccCCCcccccCCccEEEecccccccCCceEEEEEeecCC----Ccccc-----ccCCC
Q 001010 450 LPMELSIAVNTSLIALARRGIFCTEPFRIPFAGKVDMCCFDKTGTLTSDDMEFRGVVGLSN----AELED-----DMTKV 520 (1191)
Q Consensus 450 LP~~lslav~~s~~~L~k~~I~~~~p~~i~~~G~vd~icfDKTGTLT~~~l~v~gv~~~~~----~~~~~-----~~~~~ 520 (1191)
||+++++++..+..+|+++|++++++.++|.+|++|++|||||||||+|+|+|.+++..+. ..... ...+.
T Consensus 310 L~~~v~i~l~~~~~~m~~~~ilvk~~~aiE~lg~v~~ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 389 (997)
T TIGR01106 310 LLATVTVCLTLTAKRMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIHEADTTEDQSGVSFDKSS 389 (997)
T ss_pred chHHHHHHHHHHHHHHHHCCcEecCcHHHHHhcCCCEEEECCCCceecCceEEEEEEECCeEEecCCccCCCCccCCccc
Confidence 9999999999999999999999999999999999999999999999999999999874321 00000 00000
Q ss_pred c--hHHHHHHhhccceEEeCC---------cccCChHHHHHHhcccccccCCCccccCCCCCCcccEEEEecCCCCCCcE
Q 001010 521 P--VRTQEILASCHALVFVDN---------KLVGDPLEKAALKGIDWSYKSDEKAMPKRGGGNAVQIVQRHHFASHLKRM 589 (1191)
Q Consensus 521 ~--~~~~~~la~chsl~~~~~---------~~~GdPle~all~~~~~~~~~~~~~~~~~~~~~~~~il~~~~Fss~~krm 589 (1191)
. .....+++.||+....++ ...|||+|.|+++++.+...... .....+++++.+||+|++|||
T Consensus 390 ~~~~~ll~~~alcn~~~~~~~~~~~~~~~~~~~gdp~E~ALl~~a~~~~~~~~------~~~~~~~~v~~~pF~s~rK~m 463 (997)
T TIGR01106 390 ATWLALSRIAGLCNRAVFKAGQENVPILKRAVAGDASESALLKCIELCLGSVM------EMRERNPKVVEIPFNSTNKYQ 463 (997)
T ss_pred HHHHHHHHHHHHcCCCeeccccCCCcccccccCcChHHHHHHHHHHHhCCCHH------HHHhhCceeEEeccCCCCceE
Confidence 1 134567889987654322 35799999999998764322110 112346789999999999999
Q ss_pred EEEEEeC----CeEEEEEeCcHHHHHHhccCC-------------hHHHHHHHHHHHHhcCeeeeEEEEeCCCCChhhhh
Q 001010 590 SVVVRVQ----EEFFAFVKGAPETIQDRLTDL-------------PSSYIETYKKYTHQGSRVLALAFKSLPDMTVSDAR 652 (1191)
Q Consensus 590 svvv~~~----~~~~~~~KGapE~I~~~~~~~-------------p~~~~~~~~~~a~~G~RVLalA~k~l~~~~~~~~~ 652 (1191)
++++... +++++++|||||.|.++|..+ ++.+.+.+++|+++|+||||+|||.+++.+..+..
T Consensus 464 ~~v~~~~~~~~~~~~~~~KGApe~Il~~c~~~~~~g~~~~l~~~~~~~~~~~~~~~a~~GlRvla~A~k~l~~~~~~~~~ 543 (997)
T TIGR01106 464 LSIHENEDPRDPRHLLVMKGAPERILERCSSILIHGKEQPLDEELKEAFQNAYLELGGLGERVLGFCHLYLPDEQFPEGF 543 (997)
T ss_pred EEEEeccCCCCceEEEEEeCChHHHHHHhhHHhcCCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEEEeecCcccccccc
Confidence 9988642 357899999999999999531 34577778899999999999999998643322111
Q ss_pred hcccc---ccccCeEEeeeecccCcCCchhHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCcEEEeecCCCce
Q 001010 653 SLHRD---EVENGLTFAGFAVFNCPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLILCPVKNGKV 729 (1191)
Q Consensus 653 ~~~r~---~~E~dL~flG~l~~~d~lK~da~~~I~~L~~agi~vvMiTGDn~~TA~~VA~~~gI~~~~~~il~~~~~~~~ 729 (1191)
..+++ ..|+||+|+|+++++||+|+|++++|++|+++||+++|+|||++.||.++|+++||++++....
T Consensus 544 ~~~~~~~~~~e~~L~flGli~i~Dplr~~v~~aI~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~~~-------- 615 (997)
T TIGR01106 544 QFDTDDVNFPTDNLCFVGLISMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKGVGIISEGNETV-------- 615 (997)
T ss_pred cccchhhhccccCcEEEEEEeccCCChHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCccch--------
Confidence 12222 3489999999999999999999999999999999999999999999999999999985422100
Q ss_pred eeecCCCccccccCChHHHhcccccceEEEechhhhhhcchHHHHhhcCcc--eEEeecChhhHHHHHHHHhHcCCEEEE
Q 001010 730 YEWVSPDETEKIQYSEKEVEGLTDAHDLCIGGDCFEMLQQTSAVLRVIPYV--KVFARVAPEQKELILTTFKAVGRMTLM 807 (1191)
Q Consensus 730 ~~w~~~d~~~~~~~~~~~~~~~~~~~~l~itG~~l~~l~~~~~~~~~l~~~--~VfAR~sP~qK~~iV~~Lq~~g~~V~m 807 (1191)
..+++ ......+.... .+...++++|+.++.+.+ +++.+++.++ .||||++|+||.++|+.||+.|++|+|
T Consensus 616 ---~~i~~--~~~~~~~~~~~-~~~~~~vi~G~~l~~l~~-~el~~~~~~~~~~VfaR~sPeqK~~IV~~lq~~g~vv~~ 688 (997)
T TIGR01106 616 ---EDIAA--RLNIPVSQVNP-RDAKACVVHGSDLKDMTS-EQLDEILKYHTEIVFARTSPQQKLIIVEGCQRQGAIVAV 688 (997)
T ss_pred ---hhhhh--hcccccccccc-ccccceEEEhHHhhhCCH-HHHHHHHHhcCCEEEEECCHHHHHHHHHHHHHCCCEEEE
Confidence 00000 00000000000 122358999999998876 4677777655 499999999999999999999999999
Q ss_pred EcCCccCHHHHhhCCceEEeccCCCccccccCCcccccccchhhhhccccccchhhhhhhhccCCCCCCccchhhhhhhc
Q 001010 808 CGDGTNDVGALKQAHVGVALLNAVPPTQSGNSSSEASKDENTKSVKSKKSKSASEAASKAMSLNSEGTSKGKASARLEAN 887 (1191)
Q Consensus 808 ~GDG~ND~~ALk~AdVGIAl~~~~~e~~~~asdi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 887 (1191)
+|||+||+||||+|||||||+++++|+++++||+++.+|
T Consensus 689 ~GDG~ND~paLk~AdVGiamg~~G~~vak~aADivL~dd----------------------------------------- 727 (997)
T TIGR01106 689 TGDGVNDSPALKKADIGVAMGIAGSDVSKQAADMILLDD----------------------------------------- 727 (997)
T ss_pred ECCCcccHHHHhhCCcceecCCcccHHHHHhhceEEecC-----------------------------------------
Confidence 999999999999999999999888999999999988766
Q ss_pred ccccccccchHHHHHHHHHHHHHHHHhhcCCCCCCCccccCcccccCCCccCcCCccchhhhhhccchHHHHHHhhhHHH
Q 001010 888 SRTAGNRHLTAAEMQREKLKKMMEELNEEGDGRSAPIVKLGDASMASPFTAKHASVAPTTDIIRQGRSTLVTTLQMFKIL 967 (1191)
Q Consensus 888 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~klgdASiaaPFtsk~~~i~~v~~iir~GR~~Lvtt~~~fk~l 967 (1191)
++++++++|++||....+.-...+|.
T Consensus 728 ------------------------------------------------------~f~~Iv~ai~~GR~i~~ni~k~i~~~ 753 (997)
T TIGR01106 728 ------------------------------------------------------NFASIVTGVEEGRLIFDNLKKSIAYT 753 (997)
T ss_pred ------------------------------------------------------CHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45678899999999998877776664
Q ss_pred HHHHHHHHHH--HHHhhhccccccchHHHHHhHHHHH-HHHHhhccCCCCccccCCCC----CCccchhhHHHHH-----
Q 001010 968 GLNCLATAYV--LSVMYLDGVKLGDVQATISGVFTAA-FFLFISHARPLPTLSAARPH----PNIFCSYVFLSLM----- 1035 (1191)
Q Consensus 968 ~l~~li~~~s--~svly~~g~~~~d~Q~~~~~~l~~~-~~~~~s~~~p~~~Ls~~rP~----~~if~~~~~~si~----- 1035 (1191)
...++..... +..++.....++..|+++.++++.. +.++++..+|.+++-+++|. ..+++..++...+
T Consensus 754 l~~ni~~~~~~~~~~~~~~~~pl~~~qlL~inli~d~lp~~al~~e~~~~~~m~~~P~~~~~~~l~~~~~~~~~~~~~g~ 833 (997)
T TIGR01106 754 LTSNIPEITPFLIFIIANIPLPLGTITILCIDLGTDMVPAISLAYEKAESDIMKRQPRNPKTDKLVNERLISMAYGQIGM 833 (997)
T ss_pred HHhhHHHHHHHHHHHHHcCcchhHHHHHHHHHHHHHHHHHHHHhcCCCCcccccCCCcCCccccccCHHHHHHHHHHHHH
Confidence 3332222221 2223333457889999999999864 78999999999999888874 4688876665543
Q ss_pred HHHHHHHHHHHHHhhhhcccCCCCC------------CCCCCCC-----C--C----cccchhhhHHHHHHHHhhhee-E
Q 001010 1036 GQFAIHLFFLISSVKEAEKYMPDEC------------IEPDADF-----H--P----NLVNTVSYMVNMMIQVATFAV-N 1091 (1191)
Q Consensus 1036 ~Q~~i~~~~l~~~~~~~~~~~~~~~------------~~~~~~f-----~--p----~~~nt~vfl~~~~~~i~~~~v-~ 1091 (1191)
.|.++.+++.++.+. ...+.+... .+.+... . + ...-|..|....+.|+..... -
T Consensus 834 ~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~~v~~q~~~~~~~R 912 (997)
T TIGR01106 834 IQALGGFFTYFVILA-ENGFLPLHLVGLRVQWDDRWINDLEDSYGQEWTYEQRKYVEFTCHTAFFVSIVVVQWADLIICK 912 (997)
T ss_pred HHHHHHHHHHHHHHh-hcCCccccccccccccccccccccccccccccchhcccchhhhhhHHHHHHHHHHHHHHHHHhc
Confidence 344443333322211 001100000 0000000 0 0 134688899988888864433 2
Q ss_pred ecC-CCcccccccchhHHHHHHHHHHHHHHhhcccchhhhhccceeeCChhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001010 1092 YMG-HPFNQSISENKPFMYALMGAVGFFTVITSDLLRSLNDWLKLVPLPSGLRDKLLIWAGLMFLGCYSWERFLRW 1166 (1191)
Q Consensus 1092 ~~g-~Pf~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~lv~~p~~~~~~l~~~~~~~~~~~~~~e~~~~~ 1166 (1191)
... .+|+.+ +.|++++.++++..++.+++. +.|.++.+|+++++|..+...++++.++ .++++.+.|+
T Consensus 913 ~~~~~~f~~~-~~n~~l~~~~~~~~~l~~~~~--~~p~~~~~f~~~~l~~~~w~~~~~~~~~----~~~~~~~~k~ 981 (997)
T TIGR01106 913 TRRNSVFQQG-MKNKILIFGLFEETALAAFLS--YCPGMGVALRMYPLKPTWWFCAFPYSLL----IFVYDEIRKL 981 (997)
T ss_pred cCcccccccC-CcCHHHHHHHHHHHHHHHHHH--HhhhhHHHhccccCCHHHHHHHHHHHHH----HHHHHHHHHH
Confidence 333 357777 799999998887666665543 4788999999999986554444333332 2444544443
|
Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps. |
| >TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-103 Score=1005.77 Aligned_cols=796 Identities=19% Similarity=0.214 Sum_probs=619.9
Q ss_pred CChhhhHHhhhhc-CCCCC-HHHHHHHHhccCCCccCCCC-CcHHHHHHHHh-hhHHHHHHHHHHHHHhhhhHHHHHHHH
Q 001010 150 YPTKETFGYYLKC-TGHST-EAKIAVATEKWGRNVFEYPQ-PTFQKLMKENC-MEPFFVFQVFCVGLWCLDEYWYYSLFT 225 (1191)
Q Consensus 150 ~~~~~~~~~~~~~-~g~ls-~~e~~~~~~~yG~N~i~i~~-~s~~~ll~~~~-~~pf~vfqi~~v~lw~l~~y~~ysl~~ 225 (1191)
.+.++.++.++++ ..|++ ++|+++|+++||+|+++.|. +++|.+|++++ .+||+++++++.+++++-..|..++++
T Consensus 7 ~~~~~v~~~l~t~~~~GLs~~~ev~~r~~~~G~N~i~~~~~~s~~~~~l~~~~~~~~~~~L~~aa~ls~~~g~~~~~~~i 86 (884)
T TIGR01522 7 LSVEETCSKLQTDLQNGLNSSQEASHRRAFHGWNEFDVEEDESLWKKFLSQFVKNPLILLLIASAVISVFMGNIDDAVSI 86 (884)
T ss_pred CCHHHHHHHhCcCcccCCCcHHHHHHHHHhcCCCcCCCCCCCCHHHHHHHHHhhChHHHHHHHHHHHHHHHcchhhHHHH
Confidence 3466778888776 34666 88999999999999999886 69999999999 899999999998887766666666666
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcc-CCceEEEEECCEEEEEecCCCCCCcEEEEcCCCCCCCCCceeeeeEEEEecc
Q 001010 226 LFMLFMFESTMAKSRLKTLTEIRRVRV-DNQTIMVHRCGKWVKLAGTDLVPGDVVSIGRSSGQTGEDKSVPADMLILGGS 304 (1191)
Q Consensus 226 l~m~vv~~~~~~~~~~r~~~~l~~m~~-~~~~v~V~R~g~~~~I~s~eLvpGDIV~l~~g~gd~~~~~~VPaD~iLl~G~ 304 (1191)
++++++......++..++.+.++++.. .+.+++|+|||+|++|+++||||||+|.+++| ++|||||+|++|+
T Consensus 87 ~~~i~~~~~i~~~qe~~a~~~l~~L~~l~~~~~~ViRdg~~~~I~~~eLv~GDiv~l~~G-------d~IPaDg~ii~g~ 159 (884)
T TIGR01522 87 TLAILIVVTVGFVQEYRSEKSLEALNKLVPPECHLIREGKLEHVLASTLVPGDLVCLSVG-------DRVPADLRIVEAV 159 (884)
T ss_pred HhHHHHHHHHHHHHHHHHHHHHHHHhccCCCeeEEEECCEEEEEEHHHCccCCEEEecCC-------CEEeeeEEEEEcC
Confidence 555555544555566666666665544 47789999999999999999999999999987 7999999999994
Q ss_pred -eeeecccccCCCCceecccccCCCCccccccccCCCeeEeeceEEeecCCCCCCCCCCCCCcEEEEEEEecccchhhHH
Q 001010 305 -AIVNEAILTGESTPQWKVSIMGRETGEKLSARRDKSHVLFGGTKILQHTPDKTFPLKTPDGGCLAVVLRTGFETSQGKL 383 (1191)
Q Consensus 305 -~~VdES~LTGES~Pv~K~~i~~~~~~~~~~~~~~k~~~lfaGT~vlq~~~~~~~~~~~~~g~~~~vV~~TG~~T~~Gkl 383 (1191)
+.||||+|||||.|+.|.+.+..... .....+++|.+|+||.|. +|.+.++|++||.+|..|++
T Consensus 160 ~l~VDES~LTGES~pv~K~~~~~~~~~--~~~~~~~~n~v~~GT~v~-------------~G~~~~~V~~tG~~T~~gki 224 (884)
T TIGR01522 160 DLSIDESNLTGETTPVSKVTAPIPAAT--NGDLAERSNIAFMGTLVR-------------CGHGKGIVVGTGSNTEFGAV 224 (884)
T ss_pred ceEEEcccccCCCcceecccccccccc--cccccccCceEEeCCEEE-------------eeeEEEEEEEecCccHHHHH
Confidence 99999999999999999874321111 111235789999999999 89999999999999999999
Q ss_pred HHHhccccccccchhhhHHHHH----HHHHHHHHHhhheeeeecccCCCcchhHHHHHHHHhhhhccCCCcchHHHHHHH
Q 001010 384 MRTILFSTERVTANSWESGLFI----LFLVVFAVIAAGYVLKKGMEDPTRSKYKLFLSCSLIITSVIPPELPMELSIAVN 459 (1191)
Q Consensus 384 ~r~i~~~~~~~~~~~~~~~~fi----~~lli~aii~~~~~~~~~~~~~~~~~~~~~l~~i~iit~~vP~~LP~~lslav~ 459 (1191)
.+.+....+..++.++....+. .+.++++++.+...|.. +.++...+..++.+++++|||+||+++++++.
T Consensus 225 ~~~v~~~~~~kt~lq~~l~~l~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~v~llv~aiP~~Lp~~vt~~l~ 299 (884)
T TIGR01522 225 FKMMQAIEKPKTPLQKSMDLLGKQLSLVSFGVIGVICLVGWFQ-----GKDWLEMFTISVSLAVAAIPEGLPIIVTVTLA 299 (884)
T ss_pred HHHhccCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-----cCCHHHHHHHHHHHHHHHccchHHHHHHHHHH
Confidence 9998876666666665543332 22211111111111221 23466778889999999999999999999999
Q ss_pred HHHHHHHhcCccccCCCcccccCCccEEEecccccccCCceEEEEEeecCCCc--c-----ccc------cC----CCc-
Q 001010 460 TSLIALARRGIFCTEPFRIPFAGKVDMCCFDKTGTLTSDDMEFRGVVGLSNAE--L-----EDD------MT----KVP- 521 (1191)
Q Consensus 460 ~s~~~L~k~~I~~~~p~~i~~~G~vd~icfDKTGTLT~~~l~v~gv~~~~~~~--~-----~~~------~~----~~~- 521 (1191)
.+..+|+|+|++++++.++|.+|++|++|||||||||+|+|++.+++..++.. . ..+ .. ...
T Consensus 300 ~~~~r~ak~~ilvk~~~a~E~Lg~v~~Ic~DKTGTLT~n~m~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 379 (884)
T TIGR01522 300 LGVLRMSKKRAIVRKLPSVETLGSVNVICSDKTGTLTKNHMTVTKIWTSDGLHTMLNAVSLNQFGEVIVDGDVLHGFYTV 379 (884)
T ss_pred HHHHHHhhcCCcccchHHHHhccCccEEEecCccccccCeEEEEEEEecCceEeeccCCccCCCCcccccccccccccCH
Confidence 99999999999999999999999999999999999999999999997543210 0 000 00 000
Q ss_pred --hHHHHHHhhccceEEe--CCcccCChHHHHHHhcccccccCCCccccCCCCCCcccEEEEecCCCCCCcEEEEEEe--
Q 001010 522 --VRTQEILASCHALVFV--DNKLVGDPLEKAALKGIDWSYKSDEKAMPKRGGGNAVQIVQRHHFASHLKRMSVVVRV-- 595 (1191)
Q Consensus 522 --~~~~~~la~chsl~~~--~~~~~GdPle~all~~~~~~~~~~~~~~~~~~~~~~~~il~~~~Fss~~krmsvvv~~-- 595 (1191)
.+.....+.||+.... +++..|||+|+|+++++... .-+ .....++.++.+||+|++|||+++++.
T Consensus 380 ~~~~~l~~~~l~~~~~~~~~~~~~~g~p~e~All~~~~~~-~~~-------~~~~~~~~~~~~pF~s~~k~m~v~~~~~~ 451 (884)
T TIGR01522 380 AVSRILEAGNLCNNAKFRNEADTLLGNPTDVALIELLMKF-GLD-------DLRETYIRVAEVPFSSERKWMAVKCVHRQ 451 (884)
T ss_pred HHHHHHHHHhhhCCCeecCCCCCcCCChHHHHHHHHHHHc-CcH-------hHHhhCcEEeEeCCCCCCCeEEEEEEEcC
Confidence 1233456778876543 35678999999999976431 000 011246788999999999999999887
Q ss_pred CCeEEEEEeCcHHHHHHhccC----------C----hHHHHHHHHHHHHhcCeeeeEEEEeCCCCChhhhhhcccccccc
Q 001010 596 QEEFFAFVKGAPETIQDRLTD----------L----PSSYIETYKKYTHQGSRVLALAFKSLPDMTVSDARSLHRDEVEN 661 (1191)
Q Consensus 596 ~~~~~~~~KGapE~I~~~~~~----------~----p~~~~~~~~~~a~~G~RVLalA~k~l~~~~~~~~~~~~r~~~E~ 661 (1191)
++++++++|||||.|..+|.. + ++.+.+..++++++|+||+++|||.+ +.
T Consensus 452 ~~~~~~~~KGape~il~~c~~~~~~~g~~~~l~~~~~~~i~~~~~~~a~~G~rvl~~A~~~~----------------~~ 515 (884)
T TIGR01522 452 DRSEMCFMKGAYEQVLKYCTYYQKKDGKTLTLTQQQRDVIQEEAAEMASAGLRVIAFASGPE----------------KG 515 (884)
T ss_pred CCeEEEEEeCChHHHHHhhhhhhhcCCCeeeCCHHHHHHHHHHHHHHHhcCCEEEEEEEEcC----------------CC
Confidence 557889999999999999942 1 23456677889999999999999875 35
Q ss_pred CeEEeeeecccCcCCchhHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCcEEEeecCCCceeeecCCCccccc
Q 001010 662 GLTFAGFAVFNCPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKI 741 (1191)
Q Consensus 662 dL~flG~l~~~d~lK~da~~~I~~L~~agi~vvMiTGDn~~TA~~VA~~~gI~~~~~~il~~~~~~~~~~w~~~d~~~~~ 741 (1191)
+|+|+|+++++||+|||++++|++|+++|++++|+||||+.||.++|+++||.+..
T Consensus 516 ~l~~lGli~l~Dp~r~~~~~~i~~l~~~Gi~v~miTGD~~~tA~~ia~~~Gi~~~~------------------------ 571 (884)
T TIGR01522 516 QLTFLGLVGINDPPRPGVKEAVTTLITGGVRIIMITGDSQETAVSIARRLGMPSKT------------------------ 571 (884)
T ss_pred CeEEEEEEeccCcchhHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCC------------------------
Confidence 89999999999999999999999999999999999999999999999999996321
Q ss_pred cCChHHHhcccccceEEEechhhhhhcchHHHHhhcCcceEEeecChhhHHHHHHHHhHcCCEEEEEcCCccCHHHHhhC
Q 001010 742 QYSEKEVEGLTDAHDLCIGGDCFEMLQQTSAVLRVIPYVKVFARVAPEQKELILTTFKAVGRMTLMCGDGTNDVGALKQA 821 (1191)
Q Consensus 742 ~~~~~~~~~~~~~~~l~itG~~l~~l~~~~~~~~~l~~~~VfAR~sP~qK~~iV~~Lq~~g~~V~m~GDG~ND~~ALk~A 821 (1191)
+-+++|+.++.+.+ +++.+++.+..||||++|+||..+|+.||+.|+.|+|+|||+||+||||+|
T Consensus 572 --------------~~~v~g~~l~~~~~-~~l~~~~~~~~Vfar~~P~~K~~iv~~lq~~g~~v~mvGDGvND~pAl~~A 636 (884)
T TIGR01522 572 --------------SQSVSGEKLDAMDD-QQLSQIVPKVAVFARASPEHKMKIVKALQKRGDVVAMTGDGVNDAPALKLA 636 (884)
T ss_pred --------------CceeEhHHhHhCCH-HHHHHHhhcCeEEEECCHHHHHHHHHHHHHCCCEEEEECCCcccHHHHHhC
Confidence 12467888877654 567888899999999999999999999999999999999999999999999
Q ss_pred CceEEeccCCCccccccCCcccccccchhhhhccccccchhhhhhhhccCCCCCCccchhhhhhhcccccccccchHHHH
Q 001010 822 HVGVALLNAVPPTQSGNSSSEASKDENTKSVKSKKSKSASEAASKAMSLNSEGTSKGKASARLEANSRTAGNRHLTAAEM 901 (1191)
Q Consensus 822 dVGIAl~~~~~e~~~~asdi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 901 (1191)
|||||||.++++++++++|+++++|
T Consensus 637 dVGia~g~~g~~va~~aaDivl~dd------------------------------------------------------- 661 (884)
T TIGR01522 637 DIGVAMGQTGTDVAKEAADMILTDD------------------------------------------------------- 661 (884)
T ss_pred CeeEecCCCcCHHHHHhcCEEEcCC-------------------------------------------------------
Confidence 9999999778888888888888665
Q ss_pred HHHHHHHHHHHHhhcCCCCCCCccccCcccccCCCccCcCCccchhhhhhccchHHHHHHhhhHHHHH-H-HHHHHHHHH
Q 001010 902 QREKLKKMMEELNEEGDGRSAPIVKLGDASMASPFTAKHASVAPTTDIIRQGRSTLVTTLQMFKILGL-N-CLATAYVLS 979 (1191)
Q Consensus 902 ~~~~~~~~~~~~~~~~~~~~~~~~klgdASiaaPFtsk~~~i~~v~~iir~GR~~Lvtt~~~fk~l~l-~-~li~~~s~s 979 (1191)
++++++++|++||.+..+.-+...+... | +.+..+.+.
T Consensus 662 ----------------------------------------~~~~i~~~i~~gR~~~~ni~k~i~~~l~~ni~~~~~~~~~ 701 (884)
T TIGR01522 662 ----------------------------------------DFATILSAIEEGKGIFNNIKNFITFQLSTSVAALSLIALA 701 (884)
T ss_pred ----------------------------------------CHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHH
Confidence 5678889999999999888776555322 2 233333445
Q ss_pred HhhhccccccchHHHHHhHHHHH-HHHHhhccCCCCccccCCCC---CCccchhhHHHHHHHHHHHHHHHHHHhhhhccc
Q 001010 980 VMYLDGVKLGDVQATISGVFTAA-FFLFISHARPLPTLSAARPH---PNIFCSYVFLSLMGQFAIHLFFLISSVKEAEKY 1055 (1191)
Q Consensus 980 vly~~g~~~~d~Q~~~~~~l~~~-~~~~~s~~~p~~~Ls~~rP~---~~if~~~~~~si~~Q~~i~~~~l~~~~~~~~~~ 1055 (1191)
.++.....++..|+++.++++.. +++.++..+|.+.+-+++|. .++|+..++..++.|.++..++.++.+.+...+
T Consensus 702 ~~~~~~~pl~~~qiL~inl~~d~~~a~~l~~e~~~~~~m~~~P~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 781 (884)
T TIGR01522 702 TLMGFPNPLNAMQILWINILMDGPPAQSLGVEPVDKDVMRKPPRPRNDKILTKDLIKKILVSAIIIVVGTLFVFVREMQD 781 (884)
T ss_pred HHHcCCCchhHHHHHHHHHHHHhhHHHHhccCCCChhHhhCCCCCCCCCccCHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 56666678999999999999864 67899999999998877664 679999999999999877665544433321110
Q ss_pred CCCCCCCCCCCCCCcccchhhhHHHHHHHHhh-heeEecCCC-cccccccchhHHHHHHHHHHHHHHhhcccchhhhhcc
Q 001010 1056 MPDECIEPDADFHPNLVNTVSYMVNMMIQVAT-FAVNYMGHP-FNQSISENKPFMYALMGAVGFFTVITSDLLRSLNDWL 1133 (1191)
Q Consensus 1056 ~~~~~~~~~~~f~p~~~nt~vfl~~~~~~i~~-~~v~~~g~P-f~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 1133 (1191)
+ . ......|.+|....+.|+.. +.+-....+ |+.++++|++|+.++++..++.++++ .+|.++..|
T Consensus 782 ---~------~-~~~~~~t~~f~~~v~~q~~~~~~~r~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~--~~p~~~~~f 849 (884)
T TIGR01522 782 ---G------V-ITARDTTMTFTCFVFFDMFNALACRSQTKSVFEIGFFSNRMFNYAVGGSIIGQLLVI--YFPPLQSVF 849 (884)
T ss_pred ---C------c-chhhHHHHHHHHHHHHHHHHHHHHccCCccccccCcccCHHHHHHHHHHHHHHHHHH--HHHHHHHHH
Confidence 0 0 01234688999998888864 333344444 66678899999888888777665553 468899999
Q ss_pred ceeeCChhH
Q 001010 1134 KLVPLPSGL 1142 (1191)
Q Consensus 1134 ~lv~~p~~~ 1142 (1191)
+.+|++...
T Consensus 850 ~~~~l~~~~ 858 (884)
T TIGR01522 850 QTEALSIKD 858 (884)
T ss_pred cCCCCCHHH
Confidence 999988533
|
The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116. |
| >TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.1e-103 Score=998.34 Aligned_cols=795 Identities=20% Similarity=0.221 Sum_probs=596.2
Q ss_pred ChhhhHHhhhhcCCCCCHHHHHHHHhccCCCccCCCCC-cHHHHHHHHhhhHHHHHHHHHHHHHhhhhHHHHHHHHHHHH
Q 001010 151 PTKETFGYYLKCTGHSTEAKIAVATEKWGRNVFEYPQP-TFQKLMKENCMEPFFVFQVFCVGLWCLDEYWYYSLFTLFML 229 (1191)
Q Consensus 151 ~~~~~~~~~~~~~g~ls~~e~~~~~~~yG~N~i~i~~~-s~~~ll~~~~~~pf~vfqi~~v~lw~l~~y~~ysl~~l~m~ 229 (1191)
+.++.++.+.++..|||++|+++|+++||+|+++.+++ ++|++|++++.+||.++++++.++|++.+.|+.++++++++
T Consensus 19 ~~~~~~~~l~~~~~GLs~~ev~~r~~~~G~N~l~~~~~~~~~~~~~~~~~~p~~~iL~~~a~ls~~~~~~~~~~iI~~iv 98 (867)
T TIGR01524 19 GKETLLRKLGVHETGLTNVEVTERLAEFGPNQTVEEKKVPNLRLLIRAFNNPFIYILAMLMGVSYLTDDLEATVIIALMV 98 (867)
T ss_pred CHHHHHHHhCCCCCCCCHHHHHHHHHhcCCCcCCCCCCCCHHHHHHHHHhhHHHHHHHHHHHHHHHHhhHHHHHHhhhHH
Confidence 45666777777666789999999999999999998875 79999999999999999999988888877787888777777
Q ss_pred HHHHHHHHHHHHHH---HHHHHhhccCCceEEEEE------CCEEEEEecCCCCCCcEEEEcCCCCCCCCCceeeeeEEE
Q 001010 230 FMFESTMAKSRLKT---LTEIRRVRVDNQTIMVHR------CGKWVKLAGTDLVPGDVVSIGRSSGQTGEDKSVPADMLI 300 (1191)
Q Consensus 230 vv~~~~~~~~~~r~---~~~l~~m~~~~~~v~V~R------~g~~~~I~s~eLvpGDIV~l~~g~gd~~~~~~VPaD~iL 300 (1191)
++......++..|+ .++|+++. +..++|+| ||+|++|+++||||||+|.+++| ++|||||+|
T Consensus 99 ~~~~~i~~~~e~~a~ka~~~L~~l~--~~~~~V~R~~~~~~dg~~~~I~~~eLv~GDiV~l~~G-------d~VPaDg~l 169 (867)
T TIGR01524 99 LASGLLGFIQESRAERAAYALKNMV--KNTATVLRVINENGNGSMDEVPIDALVPGDLIELAAG-------DIIPADARV 169 (867)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhc--cCeeEEEEecccCCCCeEEEEEhhcCCCCCEEEECCC-------CEEcccEEE
Confidence 76666555555444 55555554 56899999 99999999999999999999987 899999999
Q ss_pred Eecc-eeeecccccCCCCceecccccCCCCccccccccCCCeeEeeceEEeecCCCCCCCCCCCCCcEEEEEEEecccch
Q 001010 301 LGGS-AIVNEAILTGESTPQWKVSIMGRETGEKLSARRDKSHVLFGGTKILQHTPDKTFPLKTPDGGCLAVVLRTGFETS 379 (1191)
Q Consensus 301 l~G~-~~VdES~LTGES~Pv~K~~i~~~~~~~~~~~~~~k~~~lfaGT~vlq~~~~~~~~~~~~~g~~~~vV~~TG~~T~ 379 (1191)
++|+ +.||||+|||||.|+.|.+....+.+.. ..+++|.+|+||.|. +|.+.++|++||.+|.
T Consensus 170 i~g~~l~VDES~LTGES~PV~K~~~~~~~~~~~---~~~~~n~vfaGT~v~-------------~G~~~~~V~~tG~~T~ 233 (867)
T TIGR01524 170 ISARDLFINQSALTGESLPVEKFVEDKRARDPE---ILERENLCFMGTNVL-------------SGHAQAVVLATGSSTW 233 (867)
T ss_pred EecCceEEEcccccCCCCcccccCCcccccccc---ccccccceecCCeEE-------------EeEEEEEEEEEcCccH
Confidence 9996 7999999999999999987432111111 235789999999999 8999999999999999
Q ss_pred hhHHHHHhccccccccchhhhHHHH----HHHHHHHHHHhhheeeeecccCCCcchhHHHHHHHHhhhhccCCCcchHHH
Q 001010 380 QGKLMRTILFSTERVTANSWESGLF----ILFLVVFAVIAAGYVLKKGMEDPTRSKYKLFLSCSLIITSVIPPELPMELS 455 (1191)
Q Consensus 380 ~Gkl~r~i~~~~~~~~~~~~~~~~f----i~~lli~aii~~~~~~~~~~~~~~~~~~~~~l~~i~iit~~vP~~LP~~ls 455 (1191)
.||+.+.+.. .+..++.++....+ +.+.++++++.+.+++. . ..++...++.++.+++++|||+||++++
T Consensus 234 ~gki~~~v~~-~~~~t~lq~~~~~i~~~~~~~~~~~~~i~~~~~~~---~--~~~~~~~~~~al~l~v~~iP~~Lp~~vt 307 (867)
T TIGR01524 234 FGSLAIAATE-RRGQTAFDKGVKSVSKLLIRFMLVMVPVVLMINGL---M--KGDWLEAFLFALAVAVGLTPEMLPMIVS 307 (867)
T ss_pred HHHHHHHhhC-CCCCCcHHHHHHHHHHHHHHHHHHHHHHheehHHH---h--cCCHHHHHHHHHHHHHHhCcchHHHHHH
Confidence 9999999877 44455555544333 33333333332222211 1 1245677888999999999999999999
Q ss_pred HHHHHHHHHHHhcCccccCCCcccccCCccEEEecccccccCCceEEEEEeecCCCccccccCCCchHHHHHHhhccceE
Q 001010 456 IAVNTSLIALARRGIFCTEPFRIPFAGKVDMCCFDKTGTLTSDDMEFRGVVGLSNAELEDDMTKVPVRTQEILASCHALV 535 (1191)
Q Consensus 456 lav~~s~~~L~k~~I~~~~p~~i~~~G~vd~icfDKTGTLT~~~l~v~gv~~~~~~~~~~~~~~~~~~~~~~la~chsl~ 535 (1191)
++++.+..+|+|+|++++++.++|.+|++|++|||||||||+|+|++.++...++. ..+....++.+++..
T Consensus 308 ~~la~g~~~mak~~ilvk~l~aiE~lg~v~vic~DKTGTLT~~~m~v~~~~~~~~~---------~~~~~l~~a~l~~~~ 378 (867)
T TIGR01524 308 SNLAKGAINMSKKKVIVKELSAIQNFGAMDILCTDKTGTLTQDKIELEKHIDSSGE---------TSERVLKMAWLNSYF 378 (867)
T ss_pred HHHHHHHHHHHhCCcEEccchhhhhccCccEEEecCCCccccCeEEEEEEecCCCC---------CHHHHHHHHHHhCCC
Confidence 99999999999999999999999999999999999999999999999998643321 111122223322211
Q ss_pred EeCCcccCChHHHHHHhcccccccCCCccccCCCCCCcccEEEEecCCCCCCcEEEEEEeCC-eEEEEEeCcHHHHHHhc
Q 001010 536 FVDNKLVGDPLEKAALKGIDWSYKSDEKAMPKRGGGNAVQIVQRHHFASHLKRMSVVVRVQE-EFFAFVKGAPETIQDRL 614 (1191)
Q Consensus 536 ~~~~~~~GdPle~all~~~~~~~~~~~~~~~~~~~~~~~~il~~~~Fss~~krmsvvv~~~~-~~~~~~KGapE~I~~~~ 614 (1191)
+ +..+||+|.|++++..... . ......++.++.+||+|++|||+++++..+ .+++++|||||.+.++|
T Consensus 379 --~-~~~~~p~~~Al~~~~~~~~---~-----~~~~~~~~~~~~~pF~s~~k~ms~~v~~~~~~~~~~~KGa~e~il~~c 447 (867)
T TIGR01524 379 --Q-TGWKNVLDHAVLAKLDESA---A-----RQTASRWKKVDEIPFDFDRRRLSVVVENRAEVTRLICKGAVEEMLTVC 447 (867)
T ss_pred --C-CCCCChHHHHHHHHHHhhc---h-----hhHhhcCceEEEeccCCCcCEEEEEEEcCCceEEEEEeCcHHHHHHhc
Confidence 1 2357999999998764210 0 001134677889999999999999988654 47899999999999999
Q ss_pred cCC-------------hHHHHHHHHHHHHhcCeeeeEEEEeCCCCChhhhhhccccccccCeEEeeeecccCcCCchhHH
Q 001010 615 TDL-------------PSSYIETYKKYTHQGSRVLALAFKSLPDMTVSDARSLHRDEVENGLTFAGFAVFNCPIREDSAK 681 (1191)
Q Consensus 615 ~~~-------------p~~~~~~~~~~a~~G~RVLalA~k~l~~~~~~~~~~~~r~~~E~dL~flG~l~~~d~lK~da~~ 681 (1191)
... .+++.+..+.++++|+||+++|||+++..+. ...+ ..|+||+|+|+++|+||+|||+++
T Consensus 448 ~~~~~~~~~~~l~~~~~~~i~~~~~~~a~~G~rvlavA~~~~~~~~~----~~~~-~~e~~l~~lGli~l~Dp~R~~~~~ 522 (867)
T TIGR01524 448 THKRFGGAVVTLSESEKSELQDMTAEMNRQGIRVIAVATKTLKVGEA----DFTK-TDEEQLIIEGFLGFLDPPKESTKE 522 (867)
T ss_pred hhhhcCCceecCCHHHHHHHHHHHHHHHhcCCEEEEEEEeccCcccc----cccc-cccCCcEEEEEEEeeCCCchhHHH
Confidence 532 2456677889999999999999999864321 1122 237899999999999999999999
Q ss_pred HHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCcEEEeecCCCceeeecCCCccccccCChHHHhcccccceEEEec
Q 001010 682 ILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLTDAHDLCIGG 761 (1191)
Q Consensus 682 ~I~~L~~agi~vvMiTGDn~~TA~~VA~~~gI~~~~~~il~~~~~~~~~~w~~~d~~~~~~~~~~~~~~~~~~~~l~itG 761 (1191)
+|++|+++||+++|+||||+.||.+||+++||.++ -+++|
T Consensus 523 aI~~l~~aGI~vvmiTGD~~~tA~aIA~~lGI~~~----------------------------------------~v~~g 562 (867)
T TIGR01524 523 AIAALFKNGINVKVLTGDNEIVTARICQEVGIDAN----------------------------------------DFLLG 562 (867)
T ss_pred HHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCC----------------------------------------Ceeec
Confidence 99999999999999999999999999999999521 14567
Q ss_pred hhhhhhcchHHHHhhcCcceEEeecChhhHHHHHHHHhHcCCEEEEEcCCccCHHHHhhCCceEEeccCCCccccccCCc
Q 001010 762 DCFEMLQQTSAVLRVIPYVKVFARVAPEQKELILTTFKAVGRMTLMCGDGTNDVGALKQAHVGVALLNAVPPTQSGNSSS 841 (1191)
Q Consensus 762 ~~l~~l~~~~~~~~~l~~~~VfAR~sP~qK~~iV~~Lq~~g~~V~m~GDG~ND~~ALk~AdVGIAl~~~~~e~~~~asdi 841 (1191)
..++.+.+ .++.+.+.++.||||++|+||.++|+.||+.|++|+|+|||+||+||||+|||||||+ ++++++++++|+
T Consensus 563 ~~l~~~~~-~el~~~~~~~~vfAr~~Pe~K~~iV~~lq~~G~vVam~GDGvNDapALk~AdVGIAmg-~gtdvAk~aADi 640 (867)
T TIGR01524 563 ADIEELSD-EELARELRKYHIFARLTPMQKSRIIGLLKKAGHTVGFLGDGINDAPALRKADVGISVD-TAADIAKEASDI 640 (867)
T ss_pred HhhhhCCH-HHHHHHhhhCeEEEECCHHHHHHHHHHHHhCCCEEEEECCCcccHHHHHhCCEEEEeC-CccHHHHHhCCE
Confidence 77766543 5678888899999999999999999999999999999999999999999999999999 678999999999
Q ss_pred ccccccchhhhhccccccchhhhhhhhccCCCCCCccchhhhhhhcccccccccchHHHHHHHHHHHHHHHHhhcCCCCC
Q 001010 842 EASKDENTKSVKSKKSKSASEAASKAMSLNSEGTSKGKASARLEANSRTAGNRHLTAAEMQREKLKKMMEELNEEGDGRS 921 (1191)
Q Consensus 842 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 921 (1191)
++++|
T Consensus 641 VLldd--------------------------------------------------------------------------- 645 (867)
T TIGR01524 641 ILLEK--------------------------------------------------------------------------- 645 (867)
T ss_pred EEecC---------------------------------------------------------------------------
Confidence 99777
Q ss_pred CCccccCcccccCCCccCcCCccchhhhhhccchHHHHHHhhhHHHHHHHHHHHHH--HHHhhhccccccchHHHHHhHH
Q 001010 922 APIVKLGDASMASPFTAKHASVAPTTDIIRQGRSTLVTTLQMFKILGLNCLATAYV--LSVMYLDGVKLGDVQATISGVF 999 (1191)
Q Consensus 922 ~~~~klgdASiaaPFtsk~~~i~~v~~iir~GR~~Lvtt~~~fk~l~l~~li~~~s--~svly~~g~~~~d~Q~~~~~~l 999 (1191)
+++++++.|++||.+..+..+..++..-..+-..++ +..+.+....+.-.|+++.+++
T Consensus 646 --------------------~~~~I~~ai~~gR~i~~ni~k~i~~~ls~n~~~~~~~~~~~~~~~~~pl~~~qil~inl~ 705 (867)
T TIGR01524 646 --------------------SLMVLEEGVIEGRNTFGNILKYLKMTASSNFGNVFSVLVASAFIPFLPMLSLHLLIQNLL 705 (867)
T ss_pred --------------------ChHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhhhhhHHHHHHHHHHHH
Confidence 456788999999999998888877744322222222 2223333368899999999999
Q ss_pred HHHHHHHhhccCCCCccccCCCCC-Cc--cchhhHHHHHHHHHHHHHHHHHHhhhhcccCCCCCCCCCCCCCCcccchhh
Q 001010 1000 TAAFFLFISHARPLPTLSAARPHP-NI--FCSYVFLSLMGQFAIHLFFLISSVKEAEKYMPDECIEPDADFHPNLVNTVS 1076 (1191)
Q Consensus 1000 ~~~~~~~~s~~~p~~~Ls~~rP~~-~i--f~~~~~~si~~Q~~i~~~~l~~~~~~~~~~~~~~~~~~~~~f~p~~~nt~v 1076 (1191)
+.++.+.++..+|.+.+-+ +|+. +. +...++.--+...++.++.+...+... +.+ ..+ ...+..|..
T Consensus 706 ~d~~~~al~~~~~~~~~m~-~p~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~--~~~----~~~---~~~~~~t~~ 775 (867)
T TIGR01524 706 YDFSQLTLPWDKMDREFLK-KPHQWEQKGMGRFMLCIGPVSSIFDIATFLLMWFVF--SAN----TVE---EQALFQSGW 775 (867)
T ss_pred HHHHHHhhcCCCCChHhhC-CCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHh--ccc----chh---hhhHHHHHH
Confidence 9988999999999988875 3432 22 211111111111111111111111110 000 000 012346778
Q ss_pred hHHHHHHHHhhh-eeEecCCCcccccccchhHHHHHHHHHHHHHHhhcccchhhhhccceeeCChhHHHHHHHHHHH
Q 001010 1077 YMVNMMIQVATF-AVNYMGHPFNQSISENKPFMYALMGAVGFFTVITSDLLRSLNDWLKLVPLPSGLRDKLLIWAGL 1152 (1191)
Q Consensus 1077 fl~~~~~~i~~~-~v~~~g~Pf~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~lv~~p~~~~~~l~~~~~~ 1152 (1191)
|+...+.|+... .+-.. +.++++|++++.++++..++.++.+.-++.+++..|++.++|..+..+++.+.+.
T Consensus 776 f~~~~~~~~~~~~~~R~~----~~~~~~n~~~~~~~~~~~~~~~~~~~~p~~~~~~~f~~~~l~~~~~~~~~~~~~~ 848 (867)
T TIGR01524 776 FVVGLLSQTLVVHMIRTE----KIPFIQSRAAAPVMIATLLVMALGIIIPFSPLGHSIGLVSLPLSYFPWLIAILVG 848 (867)
T ss_pred HHHHHHHHHHHHHhhCcC----CCCcCcchHHHHHHHHHHHHHHHHHHhchhhhhhhhccccCCccHHHHHHHHHHH
Confidence 888888777543 22222 3467789999888888777766654322223588999999987665555554443
|
The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis. |
| >PRK15122 magnesium-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-102 Score=995.96 Aligned_cols=802 Identities=19% Similarity=0.230 Sum_probs=591.4
Q ss_pred ChhhhHHhhhhcCCCCCHHHHHHHHhccCCCccCCCC-CcHHHHHHHHhhhHHHHHHHHHHHHHhhhhHH----------
Q 001010 151 PTKETFGYYLKCTGHSTEAKIAVATEKWGRNVFEYPQ-PTFQKLMKENCMEPFFVFQVFCVGLWCLDEYW---------- 219 (1191)
Q Consensus 151 ~~~~~~~~~~~~~g~ls~~e~~~~~~~yG~N~i~i~~-~s~~~ll~~~~~~pf~vfqi~~v~lw~l~~y~---------- 219 (1191)
+.++.++++.++..|||++|+++|+++||+|+++.++ +++|.+|++++.+||.++++++.+++++.++|
T Consensus 31 ~~~~v~~~l~~~~~GLs~~ea~~rl~~~G~N~l~~~~~~~~~~~~l~~f~~~~~~iL~~aa~ls~~~~~~~~~~~~~~~~ 110 (903)
T PRK15122 31 SLEETLANLNTHRQGLTEEDAAERLQRYGPNEVAHEKPPHALVQLLQAFNNPFIYVLMVLAAISFFTDYWLPLRRGEETD 110 (903)
T ss_pred CHHHHHHHhCCCCCCCCHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhhccCCcccc
Confidence 4567788887777788999999999999999999876 57999999999999999998888888776543
Q ss_pred -HHHHHHHHHHHHHHHHHHHHHHHH---HHHHHhhccCCceEEEEEC------CEEEEEecCCCCCCcEEEEcCCCCCCC
Q 001010 220 -YYSLFTLFMLFMFESTMAKSRLKT---LTEIRRVRVDNQTIMVHRC------GKWVKLAGTDLVPGDVVSIGRSSGQTG 289 (1191)
Q Consensus 220 -~ysl~~l~m~vv~~~~~~~~~~r~---~~~l~~m~~~~~~v~V~R~------g~~~~I~s~eLvpGDIV~l~~g~gd~~ 289 (1191)
..++++++++++......+|.+++ .++|+++. +..++|+|| |++++|+++||||||+|.|++|
T Consensus 111 ~~~~~iI~~~v~l~~~i~~~qe~~a~~a~~~L~~l~--~~~~~V~Rdg~~~~~g~~~~I~~~eLv~GDiV~l~~G----- 183 (903)
T PRK15122 111 LTGVIIILTMVLLSGLLRFWQEFRSNKAAEALKAMV--RTTATVLRRGHAGAEPVRREIPMRELVPGDIVHLSAG----- 183 (903)
T ss_pred HhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc--CCceEEEECCccCCCCeEEEEEHHHCCCCCEEEECCC-----
Confidence 334444455555444455555555 45555543 578999999 4899999999999999999987
Q ss_pred CCceeeeeEEEEecc-eeeecccccCCCCceecccccCC--------CCccccccccCCCeeEeeceEEeecCCCCCCCC
Q 001010 290 EDKSVPADMLILGGS-AIVNEAILTGESTPQWKVSIMGR--------ETGEKLSARRDKSHVLFGGTKILQHTPDKTFPL 360 (1191)
Q Consensus 290 ~~~~VPaD~iLl~G~-~~VdES~LTGES~Pv~K~~i~~~--------~~~~~~~~~~~k~~~lfaGT~vlq~~~~~~~~~ 360 (1191)
+.|||||+|++|+ +.||||+|||||.|+.|.+.+.. ..++.. ...++++.+|+||.|+
T Consensus 184 --d~IPaDg~li~g~~l~VDES~LTGES~PV~K~~~~~~~~~~~~~~~~~~~~-~~~~~~n~vfaGT~V~---------- 250 (903)
T PRK15122 184 --DMIPADVRLIESRDLFISQAVLTGEALPVEKYDTLGAVAGKSADALADDEG-SLLDLPNICFMGTNVV---------- 250 (903)
T ss_pred --CEEeeeEEEEEcCceEEEccccCCCCcceeeeccccccccccccccccccC-CcccccceEEeCCEEE----------
Confidence 8999999999996 68999999999999999863110 000111 1135789999999999
Q ss_pred CCCCCcEEEEEEEecccchhhHHHHHhccccccccchhhhHHHHHHHHHHHHHHhhheeeeecccCCCcchhHHHHHHHH
Q 001010 361 KTPDGGCLAVVLRTGFETSQGKLMRTILFSTERVTANSWESGLFILFLVVFAVIAAGYVLKKGMEDPTRSKYKLFLSCSL 440 (1191)
Q Consensus 361 ~~~~g~~~~vV~~TG~~T~~Gkl~r~i~~~~~~~~~~~~~~~~fi~~lli~aii~~~~~~~~~~~~~~~~~~~~~l~~i~ 440 (1191)
+|.+.++|++||.+|..|++.+.+.. ++..++.++....+...+..++++....++..+.. ...++...++.++.
T Consensus 251 ---~G~~~~~V~atG~~T~~gkI~~~v~~-~~~~t~l~~~l~~i~~~l~~~~~~~~~~v~~~~~~-~~~~~~~~l~~ais 325 (903)
T PRK15122 251 ---SGTATAVVVATGSRTYFGSLAKSIVG-TRAQTAFDRGVNSVSWLLIRFMLVMVPVVLLINGF-TKGDWLEALLFALA 325 (903)
T ss_pred ---eeeEEEEEEEeccccHhhHHHHHhcC-CCCCCcHHHHHHHHHHHHHHHHHHHHHHhhhhhhh-ccCCHHHHHHHHHH
Confidence 89999999999999999999999876 33445554433222222211111111111111100 02346677888999
Q ss_pred hhhhccCCCcchHHHHHHHHHHHHHHhcCccccCCCcccccCCccEEEecccccccCCceEEEEEeecCCCccccccCCC
Q 001010 441 IITSVIPPELPMELSIAVNTSLIALARRGIFCTEPFRIPFAGKVDMCCFDKTGTLTSDDMEFRGVVGLSNAELEDDMTKV 520 (1191)
Q Consensus 441 iit~~vP~~LP~~lslav~~s~~~L~k~~I~~~~p~~i~~~G~vd~icfDKTGTLT~~~l~v~gv~~~~~~~~~~~~~~~ 520 (1191)
+++++|||+||++++++++.+..+|+|+|++++++.++|.+|++|++|||||||||+|+|.+.+++..++..
T Consensus 326 l~V~~~Pe~Lp~~vt~~La~g~~~mak~~ilVk~l~avE~Lg~v~vIc~DKTGTLT~~~m~V~~~~~~~~~~-------- 397 (903)
T PRK15122 326 VAVGLTPEMLPMIVSSNLAKGAIAMARRKVVVKRLNAIQNFGAMDVLCTDKTGTLTQDRIILEHHLDVSGRK-------- 397 (903)
T ss_pred HHHHHccchHHHHHHHHHHHHHHHHHHcCCeecccchhhhhcCCcEEEecCCcccccCeEEEEEEEcCCCCC--------
Confidence 999999999999999999999999999999999999999999999999999999999999999987543310
Q ss_pred chHHHHHHhhccceEEeCCcccCChHHHHHHhcccccccCCCccccCCCCCCcccEEEEecCCCCCCcEEEEEEe-CCeE
Q 001010 521 PVRTQEILASCHALVFVDNKLVGDPLEKAALKGIDWSYKSDEKAMPKRGGGNAVQIVQRHHFASHLKRMSVVVRV-QEEF 599 (1191)
Q Consensus 521 ~~~~~~~la~chsl~~~~~~~~GdPle~all~~~~~~~~~~~~~~~~~~~~~~~~il~~~~Fss~~krmsvvv~~-~~~~ 599 (1191)
+.+.....+.| +.. . ...|||+|.|++++....-. . .....++.++.+||+|.+|||+++++. ++++
T Consensus 398 ~~~~l~~a~l~-s~~-~--~~~~~p~e~All~~a~~~~~---~-----~~~~~~~~~~~~pF~s~~k~ms~v~~~~~~~~ 465 (903)
T PRK15122 398 DERVLQLAWLN-SFH-Q--SGMKNLMDQAVVAFAEGNPE---I-----VKPAGYRKVDELPFDFVRRRLSVVVEDAQGQH 465 (903)
T ss_pred hHHHHHHHHHh-CCC-C--CCCCChHHHHHHHHHHHcCc---h-----hhhhcCceEEEeeeCCCcCEEEEEEEcCCCcE
Confidence 11222222222 211 1 23699999999997653210 0 011246778999999999999999987 4578
Q ss_pred EEEEeCcHHHHHHhccCC---------h----HHHHHHHHHHHHhcCeeeeEEEEeCCCCChhhhhhccccccccCeEEe
Q 001010 600 FAFVKGAPETIQDRLTDL---------P----SSYIETYKKYTHQGSRVLALAFKSLPDMTVSDARSLHRDEVENGLTFA 666 (1191)
Q Consensus 600 ~~~~KGapE~I~~~~~~~---------p----~~~~~~~~~~a~~G~RVLalA~k~l~~~~~~~~~~~~r~~~E~dL~fl 666 (1191)
++++|||||.+.++|..+ + +.+.+..+.++++|+||+++|||+++..... ...++..|+||+|+
T Consensus 466 ~~~~KGa~e~il~~c~~~~~~~~~~~l~~~~~~~i~~~~~~~a~~G~rvlavA~k~~~~~~~~---~~~~~~~e~~l~~l 542 (903)
T PRK15122 466 LLICKGAVEEMLAVATHVRDGDTVRPLDEARRERLLALAEAYNADGFRVLLVATREIPGGESR---AQYSTADERDLVIR 542 (903)
T ss_pred EEEECCcHHHHHHhchhhhcCCCeecCCHHHHHHHHHHHHHHHhCCCEEEEEEEeccCccccc---cccccccccCcEEE
Confidence 899999999999999532 2 2355667889999999999999988643211 12334568899999
Q ss_pred eeecccCcCCchhHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCcEEEeecCCCceeeecCCCccccccCChH
Q 001010 667 GFAVFNCPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEK 746 (1191)
Q Consensus 667 G~l~~~d~lK~da~~~I~~L~~agi~vvMiTGDn~~TA~~VA~~~gI~~~~~~il~~~~~~~~~~w~~~d~~~~~~~~~~ 746 (1191)
|+++|+||+|||++++|++|+++||+|+|+||||+.||.+||+++||.+.
T Consensus 543 Gli~l~Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~aIA~~lGI~~~------------------------------ 592 (903)
T PRK15122 543 GFLTFLDPPKESAAPAIAALRENGVAVKVLTGDNPIVTAKICREVGLEPG------------------------------ 592 (903)
T ss_pred EEEeccCccHHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCC------------------------------
Confidence 99999999999999999999999999999999999999999999999411
Q ss_pred HHhcccccceEEEechhhhhhcchHHHHhhcCcceEEeecChhhHHHHHHHHhHcCCEEEEEcCCccCHHHHhhCCceEE
Q 001010 747 EVEGLTDAHDLCIGGDCFEMLQQTSAVLRVIPYVKVFARVAPEQKELILTTFKAVGRMTLMCGDGTNDVGALKQAHVGVA 826 (1191)
Q Consensus 747 ~~~~~~~~~~l~itG~~l~~l~~~~~~~~~l~~~~VfAR~sP~qK~~iV~~Lq~~g~~V~m~GDG~ND~~ALk~AdVGIA 826 (1191)
-+++|..++.+.+ +++.+.++++.||||++|+||.++|+.||+.|++|+|+|||+||+||||+||||||
T Consensus 593 ----------~vi~G~el~~~~~-~el~~~v~~~~VfAr~sPe~K~~iV~~Lq~~G~vVamtGDGvNDaPALk~ADVGIA 661 (903)
T PRK15122 593 ----------EPLLGTEIEAMDD-AALAREVEERTVFAKLTPLQKSRVLKALQANGHTVGFLGDGINDAPALRDADVGIS 661 (903)
T ss_pred ----------CccchHhhhhCCH-HHHHHHhhhCCEEEEeCHHHHHHHHHHHHhCCCEEEEECCCchhHHHHHhCCEEEE
Confidence 1467888887754 57888889999999999999999999999999999999999999999999999999
Q ss_pred eccCCCccccccCCcccccccchhhhhccccccchhhhhhhhccCCCCCCccchhhhhhhcccccccccchHHHHHHHHH
Q 001010 827 LLNAVPPTQSGNSSSEASKDENTKSVKSKKSKSASEAASKAMSLNSEGTSKGKASARLEANSRTAGNRHLTAAEMQREKL 906 (1191)
Q Consensus 827 l~~~~~e~~~~asdi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 906 (1191)
|+ ++++++++++|+++++|
T Consensus 662 mg-~gtdvAkeaADiVLldd------------------------------------------------------------ 680 (903)
T PRK15122 662 VD-SGADIAKESADIILLEK------------------------------------------------------------ 680 (903)
T ss_pred eC-cccHHHHHhcCEEEecC------------------------------------------------------------
Confidence 99 68999999999999777
Q ss_pred HHHHHHHhhcCCCCCCCccccCcccccCCCccCcCCccchhhhhhccchHHHHHHhhhHHHHHHHHHHHHH--HHHhhhc
Q 001010 907 KKMMEELNEEGDGRSAPIVKLGDASMASPFTAKHASVAPTTDIIRQGRSTLVTTLQMFKILGLNCLATAYV--LSVMYLD 984 (1191)
Q Consensus 907 ~~~~~~~~~~~~~~~~~~~klgdASiaaPFtsk~~~i~~v~~iir~GR~~Lvtt~~~fk~l~l~~li~~~s--~svly~~ 984 (1191)
+++++++.|++||.+..+..+..++..-..+-..++ +.++.+.
T Consensus 681 -----------------------------------~f~~Iv~ai~~gR~i~~nI~k~i~~~ls~n~~~~~~~~~~~~~~~ 725 (903)
T PRK15122 681 -----------------------------------SLMVLEEGVIKGRETFGNIIKYLNMTASSNFGNVFSVLVASAFIP 725 (903)
T ss_pred -----------------------------------ChHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhc
Confidence 456788999999999988888777643322222222 2233344
Q ss_pred cccccchHHHHHhHHHHHHHHHhhccCCCCccc--cCCCCCCccchhhHHHHHHHHHHHHHHHHHHhhhhcccCCCCCCC
Q 001010 985 GVKLGDVQATISGVFTAAFFLFISHARPLPTLS--AARPHPNIFCSYVFLSLMGQFAIHLFFLISSVKEAEKYMPDECIE 1062 (1191)
Q Consensus 985 g~~~~d~Q~~~~~~l~~~~~~~~s~~~p~~~Ls--~~rP~~~if~~~~~~si~~Q~~i~~~~l~~~~~~~~~~~~~~~~~ 1062 (1191)
...+...|++|.++++.++.+.++..+|.+.+- +++|..++++..++.--+...++-++.++..+.. ..+ +.
T Consensus 726 ~~pl~~~qil~~nli~D~~~lal~~d~~~~~~m~~P~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~-~~~-~~---- 799 (903)
T PRK15122 726 FLPMLAIHLLLQNLMYDISQLSLPWDKMDKEFLRKPRKWDAKNIGRFMLWIGPTSSIFDITTFALMWFV-FAA-NS---- 799 (903)
T ss_pred cchhHHHHHHHHHHHHHHHHHhhcCCCCCHhhcCCCCCCChhhhHHHHHHHHHHHHHHHHHHHHHHHHH-hcc-Cc----
Confidence 467889999999999988899999999998885 3333467888755532222222222222211111 001 10
Q ss_pred CCCCCCCcccchhhhHHHHHHHHhhheeEecCCCcccccccchhHHHHHHHHHHHHHHhhcccch--hhhhccceeeCCh
Q 001010 1063 PDADFHPNLVNTVSYMVNMMIQVATFAVNYMGHPFNQSISENKPFMYALMGAVGFFTVITSDLLR--SLNDWLKLVPLPS 1140 (1191)
Q Consensus 1063 ~~~~f~p~~~nt~vfl~~~~~~i~~~~v~~~g~Pf~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~--~~~~~~~lv~~p~ 1140 (1191)
.+ .-+...|..|+...+.|+.... |.+. .+.++++|+++...+++..++.++.. .+| .++.+|++.|+|.
T Consensus 800 ~~---~~~~~~t~~f~~l~~~q~~~~~-~~R~--~~~~~~~~~~~~~~~~~~~~~~~~~~--~~p~~~~~~~f~~~~l~~ 871 (903)
T PRK15122 800 VE---MQALFQSGWFIEGLLSQTLVVH-MLRT--QKIPFIQSTAALPVLLTTGLIMAIGI--YIPFSPLGAMVGLEPLPW 871 (903)
T ss_pred Hh---hhhhhHHHHHHHHHHHHHHHHH-hhCc--CCCCcCcchHHHHHHHHHHHHHHHHH--HhhHHHHHHHhCCCCCCH
Confidence 00 0112457778888888875432 2222 23366788887666665555544443 344 4899999999997
Q ss_pred hHHHHHHHHHH
Q 001010 1141 GLRDKLLIWAG 1151 (1191)
Q Consensus 1141 ~~~~~l~~~~~ 1151 (1191)
.+...++.+.+
T Consensus 872 ~~~~~~~~~~~ 882 (903)
T PRK15122 872 SYFPWLAATLL 882 (903)
T ss_pred HHHHHHHHHHH
Confidence 55544444433
|
|
| >KOG0204 consensus Calcium transporting ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.6e-105 Score=932.98 Aligned_cols=825 Identities=20% Similarity=0.251 Sum_probs=625.5
Q ss_pred hhHHhhhhcC--CCC-CHHHHHHHHhccCCCccCCCC-CcHHHHHHHHhhhHHHHHHHHHHHHHhh--------hhHHHH
Q 001010 154 ETFGYYLKCT--GHS-TEAKIAVATEKWGRNVFEYPQ-PTFQKLMKENCMEPFFVFQVFCVGLWCL--------DEYWYY 221 (1191)
Q Consensus 154 ~~~~~~~~~~--g~l-s~~e~~~~~~~yG~N~i~i~~-~s~~~ll~~~~~~pf~vfqi~~v~lw~l--------~~y~~y 221 (1191)
..++.+.++. |.. +++|+.+|++.||+|.++.++ ++||.+.||.+.+...+.+.+|.++.+. .+-||.
T Consensus 105 gL~~~LKt~~~~Gi~~~~~el~~Rr~~fG~N~~p~k~~K~Fl~fvweA~qD~TLiIL~vaAvvSl~lgi~~~g~~~GW~e 184 (1034)
T KOG0204|consen 105 GLCKKLKTDPNEGISGEDDELERRRKIFGSNTYPEKPPKGFLRFVWEALQDVTLIILMVAAVVSLGLGIYTPGIEDGWIE 184 (1034)
T ss_pred HHHHHhccCcccCCCCChHHHHHHHHhcCCCCCCCCCCccHHHHHHHHhccchHHHHHHHHHHHHhhhhccCCCCccccc
Confidence 3455555543 443 467899999999999998766 5999999999999998888877665542 234777
Q ss_pred HHHHHHHHH---HHHHHHHHHHHHHHHHHHhhccCCceEEEEECCEEEEEecCCCCCCcEEEEcCCCCCCCCCceeeeeE
Q 001010 222 SLFTLFMLF---MFESTMAKSRLKTLTEIRRVRVDNQTIMVHRCGKWVKLAGTDLVPGDVVSIGRSSGQTGEDKSVPADM 298 (1191)
Q Consensus 222 sl~~l~m~v---v~~~~~~~~~~r~~~~l~~m~~~~~~v~V~R~g~~~~I~s~eLvpGDIV~l~~g~gd~~~~~~VPaD~ 298 (1191)
+..|++.++ +..+..-+++.+..+.|.+.. .+.++.|+|||+.++|+..|||+|||+.++-| +.|||||
T Consensus 185 G~aI~~sV~~VV~VtA~nDy~qe~QF~~L~~~k-~~~k~~ViR~G~r~~isI~diVVGDIv~lk~G-------DqvPADG 256 (1034)
T KOG0204|consen 185 GVAILLSVILVVLVTAVNDYRQELQFRKLQKEK-RNIKFQVIRGGRRQQISIYDLVVGDIVQLKIG-------DQVPADG 256 (1034)
T ss_pred chhheeeEEEEEEEeecchhHHhhhhhhhhhhh-hceEEEEEECCEEEEEEEeeeeeccEEEeecC-------Cccccce
Confidence 766655322 223333455555555555332 46889999999999999999999999999987 7999999
Q ss_pred EEEec-ceeeecccccCCCCceecccccCCCCccccccccCCCeeEeeceEEeecCCCCCCCCCCCCCcEEEEEEEeccc
Q 001010 299 LILGG-SAIVNEAILTGESTPQWKVSIMGRETGEKLSARRDKSHVLFGGTKILQHTPDKTFPLKTPDGGCLAVVLRTGFE 377 (1191)
Q Consensus 299 iLl~G-~~~VdES~LTGES~Pv~K~~i~~~~~~~~~~~~~~k~~~lfaGT~vlq~~~~~~~~~~~~~g~~~~vV~~TG~~ 377 (1191)
++++| ++.+|||+|||||.++.|.+ +++.+|++||+++ +|.+.++|+.+|.+
T Consensus 257 vli~gn~L~iDESSlTGESd~v~k~~--------------~~dPfLlSGTkv~-------------eGsgkMlVTaVGmn 309 (1034)
T KOG0204|consen 257 VLIQGNSLKIDESSLTGESDHVQKSL--------------DKDPFLLSGTKVM-------------EGSGKMLVTAVGMN 309 (1034)
T ss_pred EEEeccceeEecccccCCCcceeccC--------------CCCCeEeecceee-------------cCcceEEEEEeeec
Confidence 99999 79999999999999999975 3578999999999 99999999999999
Q ss_pred chhhHHHHHhccccccccchhhhH----HHHHHHHHHHHHHhhh-----eeeeecccCCC----------cchhHHHHHH
Q 001010 378 TSQGKLMRTILFSTERVTANSWES----GLFILFLVVFAVIAAG-----YVLKKGMEDPT----------RSKYKLFLSC 438 (1191)
Q Consensus 378 T~~Gkl~r~i~~~~~~~~~~~~~~----~~fi~~lli~aii~~~-----~~~~~~~~~~~----------~~~~~~~l~~ 438 (1191)
|..|+++.++....+..++.+... .....+-+.+|.+.+. |+......+.. ..+.+.|..+
T Consensus 310 t~wG~~m~~l~~~~~e~tpLQ~kL~~lA~~Igk~Gl~~A~~~~~VL~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~f~i~ 389 (1034)
T KOG0204|consen 310 TQWGIIMTLLGAGGEEETPLQVKLNGLATQIGKIGLLFAALTFIVLVIRFFIGKTKIEGGTGTTWSDEYIQEFVKFFIIA 389 (1034)
T ss_pred chHhhHHHhhhcCCCcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhheeeecCCCCCccccHHHHHHHHHHhhhe
Confidence 999999999877665666654322 1111122222222221 21111111100 1233456677
Q ss_pred HHhhhhccCCCcchHHHHHHHHHHHHHHhcCccccCCCcccccCCccEEEecccccccCCceEEEEEeecCCCcccccc-
Q 001010 439 SLIITSVIPPELPMELSIAVNTSLIALARRGIFCTEPFRIPFAGKVDMCCFDKTGTLTSDDMEFRGVVGLSNAELEDDM- 517 (1191)
Q Consensus 439 i~iit~~vP~~LP~~lslav~~s~~~L~k~~I~~~~p~~i~~~G~vd~icfDKTGTLT~~~l~v~gv~~~~~~~~~~~~- 517 (1191)
+.+++++||++||+|+++++++|+++|.|.+.++|...++|++|..+++|.|||||||+|+|++...+..+++.-..+.
T Consensus 390 VTilVVAVPEGLPLAVTLsLAys~kkMmkD~~LVRhL~ACETMGsAT~ICsDKTGTLT~N~MtVV~~~~~~~~~k~~~~~ 469 (1034)
T KOG0204|consen 390 VTILVVAVPEGLPLAVTLSLAYSMKKMMKDNNLVRHLDACETMGSATAICSDKTGTLTTNRMTVVQSYIGSEHYKVNSPK 469 (1034)
T ss_pred eEEEEEECCCCccHHHHHHHHHHHHHHhcchhHHHHhHHHhhcCCceEEEecCcCceEeeeEEEEeeeeccccccccCcc
Confidence 8899999999999999999999999999999999999999999999999999999999999999987765542111111
Q ss_pred -CCCchHHHHHH------hhccceEEe-C----CcccCChHHHHHHhcccccccCCCccccCCCCCCcccEEEEecCCCC
Q 001010 518 -TKVPVRTQEIL------ASCHALVFV-D----NKLVGDPLEKAALKGIDWSYKSDEKAMPKRGGGNAVQIVQRHHFASH 585 (1191)
Q Consensus 518 -~~~~~~~~~~l------a~chsl~~~-~----~~~~GdPle~all~~~~~~~~~~~~~~~~~~~~~~~~il~~~~Fss~ 585 (1191)
..+|.....++ -++.++... + .+.+|+|.|.|+|.+..- +..+.... ..+.++++.+||+|.
T Consensus 470 ~~~l~~~~~~ll~~gI~~Nt~g~v~~~~~~g~~~~~~GspTE~AlL~f~~~-LG~~~~~~-----R~e~~v~kv~~FNS~ 543 (1034)
T KOG0204|consen 470 SSNLPPSLLDLLLQGIAQNTTGSVVKPEKGGEQPEQLGSPTECALLGFGLK-LGMDFQDV-----RPEEKVVKVYPFNSV 543 (1034)
T ss_pred cccCCHHHHHHHHHHHhhcCCCeEEecCCCCcCccccCCHHHHHHHHHHHH-hCcchHhh-----cchhheeEEeccCcc
Confidence 23554443322 234444432 2 247999999999986432 33322211 145789999999999
Q ss_pred CCcEEEEEEeCCeE-EEEEeCcHHHHHHhccCC--------------hHHHHHHHHHHHHhcCeeeeEEEEeCCCCChhh
Q 001010 586 LKRMSVVVRVQEEF-FAFVKGAPETIQDRLTDL--------------PSSYIETYKKYTHQGSRVLALAFKSLPDMTVSD 650 (1191)
Q Consensus 586 ~krmsvvv~~~~~~-~~~~KGapE~I~~~~~~~--------------p~~~~~~~~~~a~~G~RVLalA~k~l~~~~~~~ 650 (1191)
+|||+|+++..+.. |+++|||+|.++++|..+ ...+++.++.|+.+|+|++|+|||+......++
T Consensus 544 kK~~gvvi~~~~~~~y~~~KGAsEiVL~~C~~~~~~~g~~~~~~e~~~~~~~~~Ie~mA~~~LRti~lAy~df~~~~~~~ 623 (1034)
T KOG0204|consen 544 KKRMGVVIKLPDGGHYVHWKGASEIVLKSCEYYIDSNGELVPFNEDDRKSFKDVIEPMASEGLRTICLAYRDFVAGPDEE 623 (1034)
T ss_pred cceeeEEEEcCCCCeEEEEcChHHHHHHhhhheECCCCCEeeCCHHHHHHHHHHHHHHHHhhhheeeEEeeccccCCCCC
Confidence 99999999986643 599999999999999432 235778899999999999999999965331111
Q ss_pred hhhcc-ccccccCeEEeeeecccCcCCchhHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCcEEEeecCCCce
Q 001010 651 ARSLH-RDEVENGLTFAGFAVFNCPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLILCPVKNGKV 729 (1191)
Q Consensus 651 ~~~~~-r~~~E~dL~flG~l~~~d~lK~da~~~I~~L~~agi~vvMiTGDn~~TA~~VA~~~gI~~~~~~il~~~~~~~~ 729 (1191)
.+.+ .+..+.+|+++|+++++||+|||++++|+.|+.|||.|.|+||||..||.+||++|||++.+
T Consensus 624 -~~~~~~~~~~~~lt~laivGIkDPvRPgV~~AV~~Cq~AGItVRMVTGDNI~TAkAIA~eCGILt~~------------ 690 (1034)
T KOG0204|consen 624 -PSWDNEELPEGGLTLLAIVGIKDPVRPGVPEAVQLCQRAGITVRMVTGDNINTAKAIARECGILTPG------------ 690 (1034)
T ss_pred -CCccccccCCCCeEEEEEeeccCCCCCCcHHHHHHHHHcCcEEEEEeCCcHHHHHHHHHHcccccCC------------
Confidence 1222 35678999999999999999999999999999999999999999999999999999998432
Q ss_pred eeecCCCccccccCChHHHhcccccceEEEechhhhhhcchHHHHhhcCcceEEeecChhhHHHHHHHHhHcCCEEEEEc
Q 001010 730 YEWVSPDETEKIQYSEKEVEGLTDAHDLCIGGDCFEMLQQTSAVLRVIPYVKVFARVAPEQKELILTTFKAVGRMTLMCG 809 (1191)
Q Consensus 730 ~~w~~~d~~~~~~~~~~~~~~~~~~~~l~itG~~l~~l~~~~~~~~~l~~~~VfAR~sP~qK~~iV~~Lq~~g~~V~m~G 809 (1191)
.-.++++|+.|+.+.+ .++.+++++.+|+||.||.||..+|+.|+++|++|+.+|
T Consensus 691 ------------------------~d~~~lEG~eFr~~s~-ee~~~i~pkl~VlARSSP~DK~lLVk~L~~~g~VVAVTG 745 (1034)
T KOG0204|consen 691 ------------------------GDFLALEGKEFRELSQ-EERDKIWPKLRVLARSSPNDKHLLVKGLIKQGEVVAVTG 745 (1034)
T ss_pred ------------------------CccceecchhhhhcCH-HHHHhhhhhheeeecCCCchHHHHHHHHHhcCcEEEEec
Confidence 1147899999997766 678899999999999999999999999999999999999
Q ss_pred CCccCHHHHhhCCceEEeccCCCccccccCCcccccccchhhhhccccccchhhhhhhhccCCCCCCccchhhhhhhccc
Q 001010 810 DGTNDVGALKQAHVGVALLNAVPPTQSGNSSSEASKDENTKSVKSKKSKSASEAASKAMSLNSEGTSKGKASARLEANSR 889 (1191)
Q Consensus 810 DG~ND~~ALk~AdVGIAl~~~~~e~~~~asdi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 889 (1191)
||+||+||||.||||.|||.+++|++||+||+++++|+|.
T Consensus 746 DGTNDaPALkeADVGlAMGIaGTeVAKEaSDIIi~DDNFs---------------------------------------- 785 (1034)
T KOG0204|consen 746 DGTNDAPALKEADVGLAMGIAGTEVAKEASDIIILDDNFS---------------------------------------- 785 (1034)
T ss_pred CCCCCchhhhhcccchhccccchhhhhhhCCeEEEcCchH----------------------------------------
Confidence 9999999999999999999999999999999999999664
Q ss_pred ccccccchHHHHHHHHHHHHHHHHhhcCCCCCCCccccCcccccCCCccCcCCccchhhhhhccchHHHHHHhhhHH-HH
Q 001010 890 TAGNRHLTAAEMQREKLKKMMEELNEEGDGRSAPIVKLGDASMASPFTAKHASVAPTTDIIRQGRSTLVTTLQMFKI-LG 968 (1191)
Q Consensus 890 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~klgdASiaaPFtsk~~~i~~v~~iir~GR~~Lvtt~~~fk~-l~ 968 (1191)
+|+..++.|||-..+.-..-|| |.
T Consensus 786 -------------------------------------------------------sIVk~v~WGR~VY~nIqKFiQFQLT 810 (1034)
T KOG0204|consen 786 -------------------------------------------------------SIVKAVKWGRNVYDNIQKFLQFQLT 810 (1034)
T ss_pred -------------------------------------------------------HHHHHHHhhhHHHHHHHHhheeEEE
Confidence 4566677777766554333332 11
Q ss_pred --HHHHHHHHHHHHhhhccccccchHHHHHhHHHH-HHHHHhhccCCCCccccCCCC---CCccchhhHHHHHHHHHHHH
Q 001010 969 --LNCLATAYVLSVMYLDGVKLGDVQATISGVFTA-AFFLFISHARPLPTLSAARPH---PNIFCSYVFLSLMGQFAIHL 1042 (1191)
Q Consensus 969 --l~~li~~~s~svly~~g~~~~d~Q~~~~~~l~~-~~~~~~s~~~p~~~Ls~~rP~---~~if~~~~~~si~~Q~~i~~ 1042 (1191)
.-+++-++.-.+.+-+ +.+...|++|.+++|. +.+|.++..+|.+.|-+++|. .++++..||..+++|..+++
T Consensus 811 VNVvAliv~fv~A~~~~d-sPLtAVQlLWVNLIMDTLgALALATepPt~~Lm~RkP~GR~~~LIt~tMwknil~qa~YQl 889 (1034)
T KOG0204|consen 811 VNVVALIVNFVSACATGD-SPLTAVQLLWVNLIMDTLGALALATEPPTDELMKRKPVGRTKPLITRTMWKNILGQAVYQL 889 (1034)
T ss_pred EEEEeehhhhhhhhhcCC-ccHHHHHHHHHHHHHHHHHHHHhccCCCChHHhcCCCCCCCCcchHHHHHHHHHHHHHHHH
Confidence 1234444444455554 8899999999999995 578999999999999999998 56999999999999999999
Q ss_pred HHHHHHhhhhcccCCCCCCCCCCCCCCcccchhhhHHHHHHHHhhheeEec--CCCcccccccchhHHHHHHHHHHHHHH
Q 001010 1043 FFLISSVKEAEKYMPDECIEPDADFHPNLVNTVSYMVNMMIQVATFAVNYM--GHPFNQSISENKPFMYALMGAVGFFTV 1120 (1191)
Q Consensus 1043 ~~l~~~~~~~~~~~~~~~~~~~~~f~p~~~nt~vfl~~~~~~i~~~~v~~~--g~Pf~~~~~~N~~~~~~l~~~~~~~~~ 1120 (1191)
+.++.+........+.+. +.. -.|...||++|....++|+..-+..=+ -+...+++.+|+.|+..++++.++...
T Consensus 890 ~vl~iL~F~G~~if~~~~--~~~-~~~~~~nTiIFNtFV~~qvFNEinaRki~~~NvFkgi~~N~~F~~ii~~T~v~Qvi 966 (1034)
T KOG0204|consen 890 IVLFILNFAGKSIFGLNG--PLH-SPPSVHNTIIFNTFVFCQVFNEINARKIDERNVFKGIFRNRLFCVIITITVVSQVI 966 (1034)
T ss_pred HHHHHHHhcchhhhccCC--CCC-CchhhheeeehhHHHHHHHHHHHhhcchhHHhHHHHHhcCceEEEEeeeeeehhhh
Confidence 998887776655443211 111 147889999999999999954433211 235567889999988777777777666
Q ss_pred hhcccchhhhhccceeeCChhHHHHHHHHHHHHHHHHHHHHHHH
Q 001010 1121 ITSDLLRSLNDWLKLVPLPSGLRDKLLIWAGLMFLGCYSWERFL 1164 (1191)
Q Consensus 1121 ~~~~~~~~~~~~~~lv~~p~~~~~~l~~~~~~~~~~~~~~e~~~ 1164 (1191)
++ ..+..++...++....+.+.+.+. ++.|.|-.++
T Consensus 967 Iv----eF~g~~~st~~L~~~qWl~ci~~g----~~sl~~g~~i 1002 (1034)
T KOG0204|consen 967 IV----EFGGAFFSTTPLSLTQWLWCIFIG----VLSLPWGQLL 1002 (1034)
T ss_pred hh----hhcCcceeeecccHHHHHHHHHHH----HHHHHHHHHh
Confidence 53 234567888877754444333333 4455554444
|
|
| >KOG0202 consensus Ca2+ transporting ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-104 Score=928.73 Aligned_cols=833 Identities=21% Similarity=0.265 Sum_probs=617.7
Q ss_pred CChhhhHHhhhhcC-CCCCHHHHHHHHhccCCCccCCCC-CcHHHHHHHHhhhHHHHHHHHHHHHHhhhhHHHHHHHHHH
Q 001010 150 YPTKETFGYYLKCT-GHSTEAKIAVATEKWGRNVFEYPQ-PTFQKLMKENCMEPFFVFQVFCVGLWCLDEYWYYSLFTLF 227 (1191)
Q Consensus 150 ~~~~~~~~~~~~~~-g~ls~~e~~~~~~~yG~N~i~i~~-~s~~~ll~~~~~~pf~vfqi~~v~lw~l~~y~~ysl~~l~ 227 (1191)
.+.++.+++|.++. +||+.+|+.+|+++||.|+++.+. .++|+++++||.+|....++.+.++.+.-..|..++.|.+
T Consensus 7 ~~v~e~~~~f~t~~~~GLt~~ev~~r~~~yG~Nel~~ee~~~~wk~vLeQF~n~Li~iLL~sA~ISfvl~~~~e~~vI~l 86 (972)
T KOG0202|consen 7 KSVSEVLAEFGTDLEEGLTSDEVTRRRKKYGENELPAEEGESLWKLVLEQFDNPLILILLLSAAISFVLADFDEPFVITL 86 (972)
T ss_pred CcHHHHHHHhCcCcccCCCHHHHHHHHHhcCCccCccccCCcHHHHHHHHHHhHHHHHHHHHHHHHHHHHhcccceeeee
Confidence 45678889998874 788999999999999999999765 6999999999999999999988888877777766666555
Q ss_pred HHHHHHHHHHHHHH---HHHHHHHhhccCCceEEEEECCEEEEEecCCCCCCcEEEEcCCCCCCCCCceeeeeEEEEec-
Q 001010 228 MLFMFESTMAKSRL---KTLTEIRRVRVDNQTIMVHRCGKWVKLAGTDLVPGDVVSIGRSSGQTGEDKSVPADMLILGG- 303 (1191)
Q Consensus 228 m~vv~~~~~~~~~~---r~~~~l~~m~~~~~~v~V~R~g~~~~I~s~eLvpGDIV~l~~g~gd~~~~~~VPaD~iLl~G- 303 (1191)
++++......+|.+ +++++|+++ .|..++|+|+|+.+.++++||||||||.++-| ++||||.+|++-
T Consensus 87 iiv~nvtVG~~QEy~aEkalEaLk~l--~p~~~~V~R~gk~~~i~A~eLVPGDiV~l~vG-------DkVPADlRl~e~~ 157 (972)
T KOG0202|consen 87 IIVINVTVGFVQEYNAEKALEALKEL--VPPMAHVLRSGKLQHILARELVPGDIVELKVG-------DKIPADLRLIEAK 157 (972)
T ss_pred eeeeeeeeeeeeehhhHHHHHHHHhc--CCccceEEecCcccceehhccCCCCEEEEecC-------CccccceeEEeee
Confidence 44443333345554 445555555 47899999999999999999999999999987 799999999975
Q ss_pred ceeeecccccCCCCceecccccCCCCccccccccCCCeeEeeceEEeecCCCCCCCCCCCCCcEEEEEEEecccchhhHH
Q 001010 304 SAIVNEAILTGESTPQWKVSIMGRETGEKLSARRDKSHVLFGGTKILQHTPDKTFPLKTPDGGCLAVVLRTGFETSQGKL 383 (1191)
Q Consensus 304 ~~~VdES~LTGES~Pv~K~~i~~~~~~~~~~~~~~k~~~lfaGT~vlq~~~~~~~~~~~~~g~~~~vV~~TG~~T~~Gkl 383 (1191)
+..||||.|||||.|+.|..-+... ++. ....+|.|++|+||.|. .|.++|+|+.||.+|..|++
T Consensus 158 sl~iDeS~LTGEs~pv~K~t~~v~~-~~~-~~~~dk~NiaFsGT~V~-------------~G~a~GIVi~TG~nTeiG~I 222 (972)
T KOG0202|consen 158 SLRIDESSLTGESEPVSKDTDAVPK-DEN-ADVQDKKNIAFSGTLVV-------------AGRAKGIVIGTGLNTEIGKI 222 (972)
T ss_pred eeeeecccccCCcccccccCccccC-CCC-CccccceeeEeecceee-------------cCceeEEEEeccccchHHHH
Confidence 6899999999999999997543221 111 11247899999999999 89999999999999999999
Q ss_pred HHHhccccccccchhhhHHHHHHHHH-HHHHHhhheeee-eccc-C---CC---cchhHHHHHHHHhhhhccCCCcchHH
Q 001010 384 MRTILFSTERVTANSWESGLFILFLV-VFAVIAAGYVLK-KGME-D---PT---RSKYKLFLSCSLIITSVIPPELPMEL 454 (1191)
Q Consensus 384 ~r~i~~~~~~~~~~~~~~~~fi~~ll-i~aii~~~~~~~-~~~~-~---~~---~~~~~~~l~~i~iit~~vP~~LP~~l 454 (1191)
.+.|....+..++.++....|-..|. +++++..+.|+. .|+. + .+ +.....|..++.+.++++|++||+.+
T Consensus 223 ~~~m~~~e~~kTPLqk~ld~~G~qLs~~is~i~v~v~~~nig~f~~p~~~g~~fk~~~~~f~IaVsLAVAAIPEGLPaVv 302 (972)
T KOG0202|consen 223 FKMMQATESPKTPLQKKLDEFGKQLSKVISFICVGVWLLNIGHFLDPVHGGSWFKGALYYFKIAVSLAVAAIPEGLPAVV 302 (972)
T ss_pred HHHHhccCCCCCcHHHHHHHHHHHHHHHheehhhhHHHhhhhhhccccccccchhchhhhhhHHHHHHHHhccCCCcchh
Confidence 99998776667887765544433333 222222222211 1111 0 01 33445677788999999999999999
Q ss_pred HHHHHHHHHHHHhcCccccCCCcccccCCccEEEecccccccCCceEEEEEeecCCCc--c-----------------cc
Q 001010 455 SIAVNTSLIALARRGIFCTEPFRIPFAGKVDMCCFDKTGTLTSDDMEFRGVVGLSNAE--L-----------------ED 515 (1191)
Q Consensus 455 slav~~s~~~L~k~~I~~~~p~~i~~~G~vd~icfDKTGTLT~~~l~v~gv~~~~~~~--~-----------------~~ 515 (1191)
+++++.+.+||+|++.++|+...+|.+|.+++||.|||||||+|+|.+..++..+... . ..
T Consensus 303 T~tLALG~~rMakknaIVRkLPsVETLGc~~VICSDKTGTLTtN~Mtv~~i~~~~~~~~~~~~f~~tg~ty~~~g~v~~~ 382 (972)
T KOG0202|consen 303 TTTLALGTRRMAKKNAIVRKLPSVETLGCVNVICSDKTGTLTTNQMTVSKIFIPDGGTATVDEFNPTGTTYSPEGEVFKD 382 (972)
T ss_pred hhhHHHhHHHHHhhhhhhhcccchhhccceeEEecCCCCcccccceEEEEEEecccccccccccccCCceeCCCCceEec
Confidence 9999999999999999999999999999999999999999999999999998654300 0 00
Q ss_pred cc--C--CCc----hHHHHHHhhccceEEeCCcc-----cCChHHHHHHhccc-ccccCCC--ccccCCC--C----CCc
Q 001010 516 DM--T--KVP----VRTQEILASCHALVFVDNKL-----VGDPLEKAALKGID-WSYKSDE--KAMPKRG--G----GNA 573 (1191)
Q Consensus 516 ~~--~--~~~----~~~~~~la~chsl~~~~~~~-----~GdPle~all~~~~-~~~~~~~--~~~~~~~--~----~~~ 573 (1191)
.. . ... .+...+-+.|+......++. +|+|.|.|+..... ..+.... ......+ . ...
T Consensus 383 ~~~~~~~~~~~~~l~~l~~i~~lCNda~v~~~~~~~~~~~G~pTE~AL~vlaeKm~l~~~~~~~~s~~~~~~c~~~~~~~ 462 (972)
T KOG0202|consen 383 GLYEKDKAGDNDLLQELAEICALCNDATVEYNDADCYEKVGEPTEGALIVLAEKMGLPGTRSTNLSNEEASACNRVYSRL 462 (972)
T ss_pred CccccccccccHHHHHHHHHHHhhhhhhhhcCchhhHHhcCCchHHHHHHHHHHcCCCcchhhcccccccccchhHHHHh
Confidence 00 0 001 23345567788776655555 89999999876542 1111111 0000000 0 122
Q ss_pred ccEEEEecCCCCCCcEEEEEEeCC---eEEEEEeCcHHHHHHhccC---------C------hHHHHHHHHHHHHhcCee
Q 001010 574 VQIVQRHHFASHLKRMSVVVRVQE---EFFAFVKGAPETIQDRLTD---------L------PSSYIETYKKYTHQGSRV 635 (1191)
Q Consensus 574 ~~il~~~~Fss~~krmsvvv~~~~---~~~~~~KGapE~I~~~~~~---------~------p~~~~~~~~~~a~~G~RV 635 (1191)
++..+.+||||++|+|||.+.... .+..|+|||||.|.++|.+ . .+.+.+...+|+++|+||
T Consensus 463 ~~~~~elpFssdrK~Msv~c~~~~~~~~~~~fvKGA~E~Vl~rcs~~~~~~g~~~~pLt~~~re~il~~~~~~g~~gLRv 542 (972)
T KOG0202|consen 463 FKKIAELPFSSDRKSMSVKCSPAHGQSGYKMFVKGAPESVLERCSTYYGSDGQTKVPLTQASRETILANVYEMGSEGLRV 542 (972)
T ss_pred hhheeEeecccccceEEEEEecCCCCccceEEecCChHHHHHhhhcEEccCCceeeeCcHHHHHHHHHHHHHHhhccceE
Confidence 455699999999999999998643 3789999999999999932 1 355677788999999999
Q ss_pred eeEEEEeCCCCC---hhhhhhccccccccCeEEeeeecccCcCCchhHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcC
Q 001010 636 LALAFKSLPDMT---VSDARSLHRDEVENGLTFAGFAVFNCPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVH 712 (1191)
Q Consensus 636 LalA~k~l~~~~---~~~~~~~~r~~~E~dL~flG~l~~~d~lK~da~~~I~~L~~agi~vvMiTGDn~~TA~~VA~~~g 712 (1191)
||+|+++.+... .+.....+|...|+||+|+|++++.||+|++++++|+.|+++||||+||||||..||.+|||++|
T Consensus 543 LalA~~~~~~~~~~~~~l~~~s~~~~~E~~LtFvGlVGi~DPPR~ev~~ai~~c~~aGIrV~mITGD~~~TA~AI~r~iG 622 (972)
T KOG0202|consen 543 LALASKDSPGQVPDDQDLNDTSNRATAESDLTFVGLVGILDPPRPEVADAIELCRQAGIRVIMITGDNKETAEAIAREIG 622 (972)
T ss_pred EEEEccCCcccChhhhhhcccccccccccceEEEEEeeccCCCchhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHhC
Confidence 999999876321 12234467889999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCcEEEeecCCCceeeecCCCccccccCChHHHhcccccceEEEechhhhhhcchHHHHhhcCcceEEeecChhhHH
Q 001010 713 IVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLTDAHDLCIGGDCFEMLQQTSAVLRVIPYVKVFARVAPEQKE 792 (1191)
Q Consensus 713 I~~~~~~il~~~~~~~~~~w~~~d~~~~~~~~~~~~~~~~~~~~l~itG~~l~~l~~~~~~~~~l~~~~VfAR~sP~qK~ 792 (1191)
|...+.. -..-++||+.|+.+.+ .++.+...++.||||++|++|.
T Consensus 623 i~~~~ed----------------------------------~~~~~~TG~efD~ls~-~~~~~~~~~~~vFaR~~P~HK~ 667 (972)
T KOG0202|consen 623 IFSEDED----------------------------------VSSMALTGSEFDDLSD-EELDDAVRRVLVFARAEPQHKL 667 (972)
T ss_pred CCcCCcc----------------------------------ccccccchhhhhcCCH-HHHHHHhhcceEEEecCchhHH
Confidence 9742210 1124789999988877 4566777899999999999999
Q ss_pred HHHHHHhHcCCEEEEEcCCccCHHHHhhCCceEEeccCCCccccccCCcccccccchhhhhccccccchhhhhhhhccCC
Q 001010 793 LILTTFKAVGRMTLMCGDGTNDVGALKQAHVGVALLNAVPPTQSGNSSSEASKDENTKSVKSKKSKSASEAASKAMSLNS 872 (1191)
Q Consensus 793 ~iV~~Lq~~g~~V~m~GDG~ND~~ALk~AdVGIAl~~~~~e~~~~asdi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 872 (1191)
+||+.||+.|.+|+|+|||+||+||||.||||||||..+++++|+|||+++.+|+|
T Consensus 668 kIVeaLq~~geivAMTGDGVNDApALK~AdIGIAMG~~GTdVaKeAsDMVL~DDnF------------------------ 723 (972)
T KOG0202|consen 668 KIVEALQSRGEVVAMTGDGVNDAPALKKADIGIAMGISGTDVAKEASDMVLADDNF------------------------ 723 (972)
T ss_pred HHHHHHHhcCCEEEecCCCccchhhhhhcccceeecCCccHhhHhhhhcEEecCcH------------------------
Confidence 99999999999999999999999999999999999999999999999999988866
Q ss_pred CCCCccchhhhhhhcccccccccchHHHHHHHHHHHHHHHHhhcCCCCCCCccccCcccccCCCccCcCCccchhhhhhc
Q 001010 873 EGTSKGKASARLEANSRTAGNRHLTAAEMQREKLKKMMEELNEEGDGRSAPIVKLGDASMASPFTAKHASVAPTTDIIRQ 952 (1191)
Q Consensus 873 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~klgdASiaaPFtsk~~~i~~v~~iir~ 952 (1191)
+.++..+.|
T Consensus 724 -----------------------------------------------------------------------stIvaAVEE 732 (972)
T KOG0202|consen 724 -----------------------------------------------------------------------STIVAAVEE 732 (972)
T ss_pred -----------------------------------------------------------------------HHHHHHHHH
Confidence 345677889
Q ss_pred cchHHHHHHhhhHHHHHHHHHHHH--HHHHhhhccccccchHHHHHhHHHH-HHHHHhhccCCCCccccCCCCC---Ccc
Q 001010 953 GRSTLVTTLQMFKILGLNCLATAY--VLSVMYLDGVKLGDVQATISGVFTA-AFFLFISHARPLPTLSAARPHP---NIF 1026 (1191)
Q Consensus 953 GR~~Lvtt~~~fk~l~l~~li~~~--s~svly~~g~~~~d~Q~~~~~~l~~-~~~~~~s~~~p~~~Ls~~rP~~---~if 1026 (1191)
||.-.-+.-+.-.|+.-.+.-... .++..+-.--.+...|.+|.++++. +++-.++-.+|-+.+-+++|.. .||
T Consensus 733 Gr~IynNik~Fir~~lSsnVgev~~I~l~aa~~~p~pL~pvQiLWiNlvtDG~PA~aLG~ep~D~DiM~kpPR~~~~~ii 812 (972)
T KOG0202|consen 733 GRAIYNNIKNFIRYLLSSNVGEVVLIFLTAAFGIPEPLIPVQILWINLVTDGPPATALGFEPVDPDIMKKPPRDSKDGII 812 (972)
T ss_pred hHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhCCCCcccchhhheeeeeccCCchhhcCCCCCChhHHhCCCCCCCCCee
Confidence 998887777776666444332222 2333444445678999999999986 5789999999999998888874 488
Q ss_pred chhhHHHHHHHHHH-HHHHHHHHhhhhcccCCCCCC-----------C----CCCCCC---Ccccc-hhhhHHHHHHHHh
Q 001010 1027 CSYVFLSLMGQFAI-HLFFLISSVKEAEKYMPDECI-----------E----PDADFH---PNLVN-TVSYMVNMMIQVA 1086 (1191)
Q Consensus 1027 ~~~~~~si~~Q~~i-~~~~l~~~~~~~~~~~~~~~~-----------~----~~~~f~---p~~~n-t~vfl~~~~~~i~ 1086 (1191)
+...+.=++.-.++ -.+++...+.+.....|.-.. + .-+-|+ |.-+. |++-++-+|.-+.
T Consensus 813 t~~l~~r~l~~g~~vg~~Tv~~f~~~~~~~~~~vt~~~~~~~~~c~~~~~~~~c~~F~~~~~~tMa~tv~V~~emfNaL~ 892 (972)
T KOG0202|consen 813 TGWLIFRYLAIGIIVGVATVGVFVWWMYGADGKVTYRQLAHYNSCCRDFYGSRCAVFEDMCPLTMALTVLVFIEMFNALN 892 (972)
T ss_pred eHHHHHHHHHhheeeeeeEhHhhhHHHhcCCCCcChhhhcchhhhcccccccchhhhcccccceEEEeehhHHHHHHHhh
Confidence 88777666544332 222222222221111111000 0 011232 22221 2222222222221
Q ss_pred hheeEecCCCcccccccchhHHHHHHHHHHHHHHhhcccchhhhhccceeeCCh
Q 001010 1087 TFAVNYMGHPFNQSISENKPFMYALMGAVGFFTVITSDLLRSLNDWLKLVPLPS 1140 (1191)
Q Consensus 1087 ~~~v~~~g~Pf~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~lv~~p~ 1140 (1191)
.--....=|.-++|+|++|.+++.+.+...++. -++|.++..|+..++..
T Consensus 893 --~~se~~slf~~~~~~N~~l~~ai~~S~~~~f~i--lYvp~l~~iFq~~~l~~ 942 (972)
T KOG0202|consen 893 --CLSENKSLFTMPPWSNRWLLWAIALSFVLHFLV--LYVPPLQRIFQTEPLSL 942 (972)
T ss_pred --cccCCcceEEecccccHHHHHHHHHHHHhhheE--EEechhhhhheecCCcH
Confidence 111234557779999999999999887776665 46899999999998864
|
|
| >TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-96 Score=930.29 Aligned_cols=735 Identities=20% Similarity=0.230 Sum_probs=552.0
Q ss_pred CCCHHHHHHHHhccCCCccCCCCCcHHHHHHHHhhhHHHHHHHHH-HHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001010 165 HSTEAKIAVATEKWGRNVFEYPQPTFQKLMKENCMEPFFVFQVFC-VGLWCLDEYWYYSLFTLFMLFMFESTMAKSRLKT 243 (1191)
Q Consensus 165 ~ls~~e~~~~~~~yG~N~i~i~~~s~~~ll~~~~~~pf~vfqi~~-v~lw~l~~y~~ysl~~l~m~vv~~~~~~~~~~r~ 243 (1191)
|||++|+++|+++||+|+++.+.+++|.+|++++.+||.+.++++ ++.+++++ |..+.++++++++......+|.+++
T Consensus 1 GLs~~ea~~r~~~~G~N~~~~~~~~~~~~~~~~~~~~~~~lL~~aa~~s~~~~~-~~~~~~i~~~~~i~~~i~~~qe~~a 79 (755)
T TIGR01647 1 GLTSAEAKKRLAKYGPNELPEKKVSPLLKFLGFFWNPLSWVMEAAAIIAIALEN-WVDFVIILGLLLLNATIGFIEENKA 79 (755)
T ss_pred CcCHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhchHHHHHHHHHHHHHhhcc-hhhhhhhhhhhHHHHHHHHHHHHHH
Confidence 568899999999999999998778889999999999997766554 44455555 4455565566555555556666666
Q ss_pred HHHHHhhcc-CCceEEEEECCEEEEEecCCCCCCcEEEEcCCCCCCCCCceeeeeEEEEecc-eeeecccccCCCCceec
Q 001010 244 LTEIRRVRV-DNQTIMVHRCGKWVKLAGTDLVPGDVVSIGRSSGQTGEDKSVPADMLILGGS-AIVNEAILTGESTPQWK 321 (1191)
Q Consensus 244 ~~~l~~m~~-~~~~v~V~R~g~~~~I~s~eLvpGDIV~l~~g~gd~~~~~~VPaD~iLl~G~-~~VdES~LTGES~Pv~K 321 (1191)
.+.++++.. .+.+++|+|||+|++|+++||+|||+|.+++| ++|||||+|++|+ +.||||+|||||.|+.|
T Consensus 80 ~~~~~~L~~~~~~~~~V~Rdg~~~~I~~~~Lv~GDiV~l~~G-------d~IPaDg~vi~g~~~~VDeS~LTGES~PV~K 152 (755)
T TIGR01647 80 GNAVEALKQSLAPKARVLRDGKWQEIPASELVPGDVVRLKIG-------DIVPADCRLFEGDYIQVDQAALTGESLPVTK 152 (755)
T ss_pred HHHHHHHHhhCCCeEEEEECCEEEEEEhhhCcCCCEEEECCC-------CEEeceEEEEecCceEEEcccccCCccceEe
Confidence 655555543 47889999999999999999999999999987 8999999999997 99999999999999999
Q ss_pred ccccCCCCccccccccCCCeeEeeceEEeecCCCCCCCCCCCCCcEEEEEEEecccchhhHHHHHhccccccccchhhhH
Q 001010 322 VSIMGRETGEKLSARRDKSHVLFGGTKILQHTPDKTFPLKTPDGGCLAVVLRTGFETSQGKLMRTILFSTERVTANSWES 401 (1191)
Q Consensus 322 ~~i~~~~~~~~~~~~~~k~~~lfaGT~vlq~~~~~~~~~~~~~g~~~~vV~~TG~~T~~Gkl~r~i~~~~~~~~~~~~~~ 401 (1191)
.+ ++.+|+||.|. +|.+.++|++||.+|..|++.+.+...+++.++.++..
T Consensus 153 ~~----------------~~~v~aGT~v~-------------~G~~~~~V~~tG~~T~~g~i~~lv~~~~~~~~~lq~~~ 203 (755)
T TIGR01647 153 KT----------------GDIAYSGSTVK-------------QGEAEAVVTATGMNTFFGKAAALVQSTETGSGHLQKIL 203 (755)
T ss_pred cc----------------CCeeeccCEEE-------------ccEEEEEEEEcCCccHHHHHHHHhhccCCCCCcHHHHH
Confidence 75 78999999999 89999999999999999999998877665555555544
Q ss_pred H----HHHHHHHHHHHHhhheeeeecccCCCcchhHHHHHHHHhhhhccCCCcchHHHHHHHHHHHHHHhcCccccCCCc
Q 001010 402 G----LFILFLVVFAVIAAGYVLKKGMEDPTRSKYKLFLSCSLIITSVIPPELPMELSIAVNTSLIALARRGIFCTEPFR 477 (1191)
Q Consensus 402 ~----~fi~~lli~aii~~~~~~~~~~~~~~~~~~~~~l~~i~iit~~vP~~LP~~lslav~~s~~~L~k~~I~~~~p~~ 477 (1191)
. +++.+.++++++.+.+++... +.++...+..++.+++++|||+||+++++++..+..+|+|+|++++++.+
T Consensus 204 ~~i~~~~~~~~~~~~~i~~~~~~~~~----~~~~~~~~~~~i~vlv~a~P~~Lp~~~~~~la~g~~r~ak~gilvk~l~a 279 (755)
T TIGR01647 204 SKIGLFLIVLIGVLVLIELVVLFFGR----GESFREGLQFALVLLVGGIPIAMPAVLSVTMAVGAAELAKKKAIVTRLTA 279 (755)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHc----CCCHHHHHHHHHHHHHHhCCcchHHHHHHHHHHHHHHHHhCCeEEcccHH
Confidence 3 333333333333333332201 23566778889999999999999999999999999999999999999999
Q ss_pred ccccCCccEEEecccccccCCceEEEEEeecCCCccccccCCCchHHHHHHhhccceEEeCCcccCChHHHHHHhccccc
Q 001010 478 IPFAGKVDMCCFDKTGTLTSDDMEFRGVVGLSNAELEDDMTKVPVRTQEILASCHALVFVDNKLVGDPLEKAALKGIDWS 557 (1191)
Q Consensus 478 i~~~G~vd~icfDKTGTLT~~~l~v~gv~~~~~~~~~~~~~~~~~~~~~~la~chsl~~~~~~~~GdPle~all~~~~~~ 557 (1191)
+|.+|++|++|||||||||+|+|.+.+++..++. . .+.+.....+.|.. +..+||+|.|++++..-.
T Consensus 280 lE~lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~~-~------~~~~~l~~a~~~~~------~~~~~pi~~Ai~~~~~~~ 346 (755)
T TIGR01647 280 IEELAGMDILCSDKTGTLTLNKLSIDEILPFFNG-F------DKDDVLLYAALASR------EEDQDAIDTAVLGSAKDL 346 (755)
T ss_pred HHhccCCcEEEecCCCccccCceEEEEEEecCCC-C------CHHHHHHHHHHhCC------CCCCChHHHHHHHHHHHh
Confidence 9999999999999999999999999999864321 0 11222333333321 235899999999865310
Q ss_pred ccCCCccccCCCCCCcccEEEEecCCCCCCcEEEEEEeC--CeEEEEEeCcHHHHHHhccC---ChHHHHHHHHHHHHhc
Q 001010 558 YKSDEKAMPKRGGGNAVQIVQRHHFASHLKRMSVVVRVQ--EEFFAFVKGAPETIQDRLTD---LPSSYIETYKKYTHQG 632 (1191)
Q Consensus 558 ~~~~~~~~~~~~~~~~~~il~~~~Fss~~krmsvvv~~~--~~~~~~~KGapE~I~~~~~~---~p~~~~~~~~~~a~~G 632 (1191)
+ .....+++++.+||+|.+|+|+++++.. ++.++++|||||.+.++|.. .++++.+..++++++|
T Consensus 347 ---~-------~~~~~~~~~~~~pf~~~~k~~~~~v~~~~~g~~~~~~kGa~e~il~~c~~~~~~~~~~~~~~~~~~~~G 416 (755)
T TIGR01647 347 ---K-------EARDGYKVLEFVPFDPVDKRTEATVEDPETGKRFKVTKGAPQVILDLCDNKKEIEEKVEEKVDELASRG 416 (755)
T ss_pred ---H-------HHHhcCceEEEeccCCCCCeEEEEEEeCCCceEEEEEeCChHHHHHhcCCcHHHHHHHHHHHHHHHhCC
Confidence 0 0012367788999999999999998763 56778999999999999954 4677888899999999
Q ss_pred CeeeeEEEEeCCCCChhhhhhccccccccCeEEeeeecccCcCCchhHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcC
Q 001010 633 SRVLALAFKSLPDMTVSDARSLHRDEVENGLTFAGFAVFNCPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVH 712 (1191)
Q Consensus 633 ~RVLalA~k~l~~~~~~~~~~~~r~~~E~dL~flG~l~~~d~lK~da~~~I~~L~~agi~vvMiTGDn~~TA~~VA~~~g 712 (1191)
+||+++|||+ .|++|+|+|+++|+||+|||++++|++||++|++++|+||||+.||.+||+++|
T Consensus 417 ~rvl~vA~~~----------------~e~~l~~~Gli~l~Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~IA~~lG 480 (755)
T TIGR01647 417 YRALGVARTD----------------EEGRWHFLGLLPLFDPPRHDTKETIERARHLGVEVKMVTGDHLAIAKETARRLG 480 (755)
T ss_pred CEEEEEEEEc----------------CCCCcEEEEEeeccCCChhhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcC
Confidence 9999999972 157899999999999999999999999999999999999999999999999999
Q ss_pred CCCCCcEEEeecCCCceeeecCCCccccccCChHHHhcccccceEEEechhhhhhcchHHHHhhcCcceEEeecChhhHH
Q 001010 713 IVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLTDAHDLCIGGDCFEMLQQTSAVLRVIPYVKVFARVAPEQKE 792 (1191)
Q Consensus 713 I~~~~~~il~~~~~~~~~~w~~~d~~~~~~~~~~~~~~~~~~~~l~itG~~l~~l~~~~~~~~~l~~~~VfAR~sP~qK~ 792 (1191)
|.++ +. +.++ ..+|+..+.+. .+++.+.+.++.||||++|+||.
T Consensus 481 I~~~---~~----------------------~~~~----------l~~~~~~~~~~-~~~~~~~~~~~~vfAr~~Pe~K~ 524 (755)
T TIGR01647 481 LGTN---IY----------------------TADV----------LLKGDNRDDLP-SGELGEMVEDADGFAEVFPEHKY 524 (755)
T ss_pred CCCC---Cc----------------------CHHH----------hcCCcchhhCC-HHHHHHHHHhCCEEEecCHHHHH
Confidence 9531 00 0000 01222222222 24577788888999999999999
Q ss_pred HHHHHHhHcCCEEEEEcCCccCHHHHhhCCceEEeccCCCccccccCCcccccccchhhhhccccccchhhhhhhhccCC
Q 001010 793 LILTTFKAVGRMTLMCGDGTNDVGALKQAHVGVALLNAVPPTQSGNSSSEASKDENTKSVKSKKSKSASEAASKAMSLNS 872 (1191)
Q Consensus 793 ~iV~~Lq~~g~~V~m~GDG~ND~~ALk~AdVGIAl~~~~~e~~~~asdi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 872 (1191)
++|+.||+.|++|+|+|||+||+||||+|||||||+ ++++++++++|+++++|
T Consensus 525 ~iV~~lq~~G~~VamvGDGvNDapAL~~AdVGIAm~-~gtdvAkeaADivLl~d-------------------------- 577 (755)
T TIGR01647 525 EIVEILQKRGHLVGMTGDGVNDAPALKKADVGIAVA-GATDAARSAADIVLTEP-------------------------- 577 (755)
T ss_pred HHHHHHHhcCCEEEEEcCCcccHHHHHhCCeeEEec-CCcHHHHHhCCEEEEcC--------------------------
Confidence 999999999999999999999999999999999999 57899999999999776
Q ss_pred CCCCccchhhhhhhcccccccccchHHHHHHHHHHHHHHHHhhcCCCCCCCccccCcccccCCCccCcCCccchhhhhhc
Q 001010 873 EGTSKGKASARLEANSRTAGNRHLTAAEMQREKLKKMMEELNEEGDGRSAPIVKLGDASMASPFTAKHASVAPTTDIIRQ 952 (1191)
Q Consensus 873 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~klgdASiaaPFtsk~~~i~~v~~iir~ 952 (1191)
+++.+++.|++
T Consensus 578 ---------------------------------------------------------------------~l~~I~~ai~~ 588 (755)
T TIGR01647 578 ---------------------------------------------------------------------GLSVIVDAILE 588 (755)
T ss_pred ---------------------------------------------------------------------ChHHHHHHHHH
Confidence 45678899999
Q ss_pred cchHHHHHHhhhHHHHHHHH--HHHHHHHHhhhccccccchHHHHHhHHHHHHHHHhhccCCCCccccCCCCCCccchhh
Q 001010 953 GRSTLVTTLQMFKILGLNCL--ATAYVLSVMYLDGVKLGDVQATISGVFTAAFFLFISHARPLPTLSAARPHPNIFCSYV 1030 (1191)
Q Consensus 953 GR~~Lvtt~~~fk~l~l~~l--i~~~s~svly~~g~~~~d~Q~~~~~~l~~~~~~~~s~~~p~~~Ls~~rP~~~if~~~~ 1030 (1191)
||.+..+..+..+|..-..+ +....+..+. .+..++..|+++.+++...+.+.++..++-+ +++|....+. .+
T Consensus 589 gR~~~~ni~k~i~~~~~~n~~~~~~~~~~~l~-~~~~l~~~~il~~~l~~d~~~~~l~~~~~~~---~~~p~~~~~~-~~ 663 (755)
T TIGR01647 589 SRKIFQRMKSYVIYRIAETIRIVFFFGLLILI-LNFYFPPIMVVIIAILNDGTIMTIAYDNVKP---SKLPQRWNLR-EV 663 (755)
T ss_pred HHHHHHHHHHHHHHHhcccHHHHHHHHHHHHH-hCcchhHHHHHHHHHHHhHhHhhccCCCCCC---CCCCCccchH-HH
Confidence 99999988888666332222 1122222222 2334899999999999887777777777654 3566655554 22
Q ss_pred HHHHHHHH-HHHHHHH-HHHhhhhc-ccCCCCCCCCCCCCCCcccchhhhHHHHHHHHh-hheeEecCCCcccccccchh
Q 001010 1031 FLSLMGQF-AIHLFFL-ISSVKEAE-KYMPDECIEPDADFHPNLVNTVSYMVNMMIQVA-TFAVNYMGHPFNQSISENKP 1106 (1191)
Q Consensus 1031 ~~si~~Q~-~i~~~~l-~~~~~~~~-~~~~~~~~~~~~~f~p~~~nt~vfl~~~~~~i~-~~~v~~~g~Pf~~~~~~N~~ 1106 (1191)
+...+..- .+-+.++ +|.+.... +|...... ........|..|+...+.|.. .|.+-..+.||.. +-|++
T Consensus 664 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~t~~f~~~~~~~~~~~~~~r~~~~~~~~--~p~~~ 737 (755)
T TIGR01647 664 FTMSTVLGIYLVISTFLLLAIALDTSFFIDKFGL----QLLHGNLQSLIYLQVSISGQATIFVTRTHGFFWSE--RPGKL 737 (755)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcccchhcccc----cccHhhhHHHHHHHHHHHHHHHHheeccCCCCccc--CCcHH
Confidence 22222222 2222222 22111110 11111000 001123468888888776665 5666678888854 58888
Q ss_pred HHHHHHHHHHHHHHhh
Q 001010 1107 FMYALMGAVGFFTVIT 1122 (1191)
Q Consensus 1107 ~~~~l~~~~~~~~~~~ 1122 (1191)
++.+.++..++..+++
T Consensus 738 l~~~~~~~~~~~~~~~ 753 (755)
T TIGR01647 738 LFIAFVIAQIIATFIA 753 (755)
T ss_pred HHHHHHHHHHHHHHHh
Confidence 8888877776666554
|
This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast. |
| >TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-96 Score=943.39 Aligned_cols=794 Identities=20% Similarity=0.240 Sum_probs=585.7
Q ss_pred HHHHhhhHHHHHHHHHHHHHhhhh----------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc-CCceEEEEEC
Q 001010 194 MKENCMEPFFVFQVFCVGLWCLDE----------YWYYSLFTLFMLFMFESTMAKSRLKTLTEIRRVRV-DNQTIMVHRC 262 (1191)
Q Consensus 194 l~~~~~~pf~vfqi~~v~lw~l~~----------y~~ysl~~l~m~vv~~~~~~~~~~r~~~~l~~m~~-~~~~v~V~R~ 262 (1191)
+++++.+|+.+.++++.++.++-+ -|+.++++++++++......+|..|+.+.++++.. .+.+++|+||
T Consensus 1 ~~~~f~~~~~~iL~~aa~ls~~~~~~~~~~~~~~~~~~~~~Il~vi~~~~~i~~~qe~~a~~~~~~L~~~~~~~~~ViRd 80 (917)
T TIGR01116 1 VLEQFEDLLVRILLLAACVSFVLAWFEEGEETVTAFVEPFVILLILVANAIVGVWQERNAEKAIEALKEYESEHAKVLRD 80 (917)
T ss_pred ChHHHhCHHHHHHHHHHHHHHHHhcccccccccccHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEEC
Confidence 368899999988887777655432 36667777777766666667777666666666654 4778999999
Q ss_pred CEEEEEecCCCCCCcEEEEcCCCCCCCCCceeeeeEEEEecc-eeeecccccCCCCceecccccCCCCccccccccCCCe
Q 001010 263 GKWVKLAGTDLVPGDVVSIGRSSGQTGEDKSVPADMLILGGS-AIVNEAILTGESTPQWKVSIMGRETGEKLSARRDKSH 341 (1191)
Q Consensus 263 g~~~~I~s~eLvpGDIV~l~~g~gd~~~~~~VPaD~iLl~G~-~~VdES~LTGES~Pv~K~~i~~~~~~~~~~~~~~k~~ 341 (1191)
|++++|+++||||||+|.+++| +.|||||+|++|+ +.||||+|||||.|+.|.+.+..+.+. ...+++|
T Consensus 81 g~~~~I~~~~Lv~GDiv~l~~G-------d~IPaD~~ll~~~~l~VdeS~LTGES~pv~K~~~~~~~~~~---~~~~~~n 150 (917)
T TIGR01116 81 GRWSVIKAKDLVPGDIVELAVG-------DKVPADIRVLSLKTLRVDQSILTGESVSVNKHTESVPDERA---VNQDKKN 150 (917)
T ss_pred CEEEEEEHHHCCCCCEEEECCC-------CEeeccEEEEEecceEEEcccccCCCCcccccccccCcccc---Ccccccc
Confidence 9999999999999999999987 8999999999994 999999999999999998743221111 1235789
Q ss_pred eEeeceEEeecCCCCCCCCCCCCCcEEEEEEEecccchhhHHHHHhccccccccchhhhHHHHH----HHHHHHHHHhhh
Q 001010 342 VLFGGTKILQHTPDKTFPLKTPDGGCLAVVLRTGFETSQGKLMRTILFSTERVTANSWESGLFI----LFLVVFAVIAAG 417 (1191)
Q Consensus 342 ~lfaGT~vlq~~~~~~~~~~~~~g~~~~vV~~TG~~T~~Gkl~r~i~~~~~~~~~~~~~~~~fi----~~lli~aii~~~ 417 (1191)
++|+||.|. +|.+.++|++||.+|..||+.+.+...+++.++.++....+. .+.++++++.+.
T Consensus 151 ~l~~GT~v~-------------~G~~~~~V~~tG~~T~~gki~~~~~~~~~~~t~lq~~l~~~~~~l~~~~~~~~~i~~~ 217 (917)
T TIGR01116 151 MLFSGTLVV-------------AGKARGVVVRTGMSTEIGKIRDEMRAAEQEDTPLQKKLDEFGELLSKVIGLICILVWV 217 (917)
T ss_pred eeeeCCEEe-------------cceEEEEEEEeCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999 799999999999999999999998877776777665544332 222222222222
Q ss_pred eeeeeccc-CCCcc----hhHHHHHHHHhhhhccCCCcchHHHHHHHHHHHHHHhcCccccCCCcccccCCccEEEeccc
Q 001010 418 YVLKKGME-DPTRS----KYKLFLSCSLIITSVIPPELPMELSIAVNTSLIALARRGIFCTEPFRIPFAGKVDMCCFDKT 492 (1191)
Q Consensus 418 ~~~~~~~~-~~~~~----~~~~~l~~i~iit~~vP~~LP~~lslav~~s~~~L~k~~I~~~~p~~i~~~G~vd~icfDKT 492 (1191)
+++..... ..... +...+..++.+++++||++||++++++...+..+|++++++++++..+|.+|++|++|||||
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~v~~iP~~Lp~~vti~l~~~~~~m~~~~ilvk~~~~iE~lg~v~~ic~DKT 297 (917)
T TIGR01116 218 INIGHFNDPALGGGWIQGAIYYFKIAVALAVAAIPEGLPAVITTCLALGTRKMAKKNAIVRKLPSVETLGCTTVICSDKT 297 (917)
T ss_pred HHHHHhccccccchhHHHHHHHHHHHHhhhhhccccccHHHHHHHHHHHHHHHHHCCcEecCcHHHHhccCceEEEecCC
Confidence 11110000 00111 22344456788899999999999999999999999999999999999999999999999999
Q ss_pred ccccCCceEEEEEeecCCC------------cccccc---C--------C--CchHHHHHHhhccceEEeC----C--cc
Q 001010 493 GTLTSDDMEFRGVVGLSNA------------ELEDDM---T--------K--VPVRTQEILASCHALVFVD----N--KL 541 (1191)
Q Consensus 493 GTLT~~~l~v~gv~~~~~~------------~~~~~~---~--------~--~~~~~~~~la~chsl~~~~----~--~~ 541 (1191)
||||+|+|++.+++..++. ...+.. . . .......+++.||+..... + +.
T Consensus 298 GTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~lc~~~~~~~~~~~~~~~~ 377 (917)
T TIGR01116 298 GTLTTNQMSVCKVVALDPSSSSLNEFCVTGTTYAPEGGVIKDDGPVAGGQDAGLEELATIAALCNDSSLDFNERKGVYEK 377 (917)
T ss_pred ccccCCeEEEEEEEecCCcccccceEEecCCccCCCccccccCCcccccchHHHHHHHHHHHhcCCCeeeccccCCceee
Confidence 9999999999998764320 000000 0 0 0123455678899865432 1 24
Q ss_pred cCChHHHHHHhccc---ccccCCCc-c--ccCCC----CCCcccEEEEecCCCCCCcEEEEEEeCCeEEEEEeCcHHHHH
Q 001010 542 VGDPLEKAALKGID---WSYKSDEK-A--MPKRG----GGNAVQIVQRHHFASHLKRMSVVVRVQEEFFAFVKGAPETIQ 611 (1191)
Q Consensus 542 ~GdPle~all~~~~---~~~~~~~~-~--~~~~~----~~~~~~il~~~~Fss~~krmsvvv~~~~~~~~~~KGapE~I~ 611 (1191)
.|||+|.|+++++. +....... . ....+ ....+++++.+||+|++|||||+++.++++++++|||||.|.
T Consensus 378 ~gdp~E~ALl~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pF~s~rK~msviv~~~~~~~~~~KGApe~il 457 (917)
T TIGR01116 378 VGEATEAALKVLVEKMGLPATKNGVSSKRRPALGCNSVWNDKFKKLATLEFSRDRKSMSVLCKPSTGNKLFVKGAPEGVL 457 (917)
T ss_pred ccChhHHHHHHHHHHcCCCchhcccccccccccchhHHHHhhcceeeecccChhhCeEEEEEeeCCcEEEEEcCChHHHH
Confidence 69999999998643 21111100 0 00000 123577899999999999999999987888999999999999
Q ss_pred HhccCC--------------hHHHHHHHHHHHH-hcCeeeeEEEEeCCCCChh--hhhhccccccccCeEEeeeecccCc
Q 001010 612 DRLTDL--------------PSSYIETYKKYTH-QGSRVLALAFKSLPDMTVS--DARSLHRDEVENGLTFAGFAVFNCP 674 (1191)
Q Consensus 612 ~~~~~~--------------p~~~~~~~~~~a~-~G~RVLalA~k~l~~~~~~--~~~~~~r~~~E~dL~flG~l~~~d~ 674 (1191)
++|... .+.+.+..++|++ +|+||||+|||.++..... ......++.+|+||+|+|+++++||
T Consensus 458 ~~c~~~~~~~g~~~~l~~~~~~~i~~~~~~~a~~~GlRvl~~A~k~~~~~~~~~~~~~~~~~~~~e~~l~~lGl~~~~Dp 537 (917)
T TIGR01116 458 ERCTHILNGDGRAVPLTDKMKNTILSVIKEMGTTKALRCLALAFKDIPDPREEDLLSDPANFEAIESDLTFIGVVGMLDP 537 (917)
T ss_pred HhccceecCCCCeeeCCHHHHHHHHHHHHHHHhhcCCeEEEEEEEECCccccccccccchhhhhhcCCcEEEEEeeeeCC
Confidence 999531 1246667889999 9999999999998642211 0112244678999999999999999
Q ss_pred CCchhHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCcEEEeecCCCceeeecCCCccccccCChHHHhccccc
Q 001010 675 IREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLTDA 754 (1191)
Q Consensus 675 lK~da~~~I~~L~~agi~vvMiTGDn~~TA~~VA~~~gI~~~~~~il~~~~~~~~~~w~~~d~~~~~~~~~~~~~~~~~~ 754 (1191)
+|+|++++|++|+++|++++|+|||++.||.++|+++||..++.. -
T Consensus 538 lr~~v~e~I~~l~~aGI~v~miTGD~~~tA~~ia~~~gi~~~~~~----------------------------------v 583 (917)
T TIGR01116 538 PRPEVADAIEKCRTAGIRVIMITGDNKETAEAICRRIGIFSPDED----------------------------------V 583 (917)
T ss_pred CchhHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHcCCCCCCcc----------------------------------c
Confidence 999999999999999999999999999999999999999732210 0
Q ss_pred ceEEEechhhhhhcchHHHHhhcCcceEEeecChhhHHHHHHHHhHcCCEEEEEcCCccCHHHHhhCCceEEeccCCCcc
Q 001010 755 HDLCIGGDCFEMLQQTSAVLRVIPYVKVFARVAPEQKELILTTFKAVGRMTLMCGDGTNDVGALKQAHVGVALLNAVPPT 834 (1191)
Q Consensus 755 ~~l~itG~~l~~l~~~~~~~~~l~~~~VfAR~sP~qK~~iV~~Lq~~g~~V~m~GDG~ND~~ALk~AdVGIAl~~~~~e~ 834 (1191)
...+++|+.++.+.+ +++.+...+..||||++|+||.++|+.||+.|++|+|+|||+||++|||+|||||||++ +++.
T Consensus 584 ~~~~~~g~~l~~~~~-~~~~~~~~~~~v~ar~~P~~K~~iV~~lq~~g~~va~iGDG~ND~~alk~AdVGia~g~-g~~~ 661 (917)
T TIGR01116 584 TFKSFTGREFDEMGP-AKQRAACRSAVLFSRVEPSHKSELVELLQEQGEIVAMTGDGVNDAPALKKADIGIAMGS-GTEV 661 (917)
T ss_pred cceeeeHHHHhhCCH-HHHHHhhhcCeEEEecCHHHHHHHHHHHHhcCCeEEEecCCcchHHHHHhCCeeEECCC-CcHH
Confidence 124578888777654 45666777889999999999999999999999999999999999999999999999994 4666
Q ss_pred ccccCCcccccccchhhhhccccccchhhhhhhhccCCCCCCccchhhhhhhcccccccccchHHHHHHHHHHHHHHHHh
Q 001010 835 QSGNSSSEASKDENTKSVKSKKSKSASEAASKAMSLNSEGTSKGKASARLEANSRTAGNRHLTAAEMQREKLKKMMEELN 914 (1191)
Q Consensus 835 ~~~asdi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 914 (1191)
+++++|+++.+|
T Consensus 662 ak~aAD~vl~dd-------------------------------------------------------------------- 673 (917)
T TIGR01116 662 AKEASDMVLADD-------------------------------------------------------------------- 673 (917)
T ss_pred HHHhcCeEEccC--------------------------------------------------------------------
Confidence 666676666443
Q ss_pred hcCCCCCCCccccCcccccCCCccCcCCccchhhhhhccchHHHHHHhhhHHHHHHHHHHHHHHHH--hhhccccccchH
Q 001010 915 EEGDGRSAPIVKLGDASMASPFTAKHASVAPTTDIIRQGRSTLVTTLQMFKILGLNCLATAYVLSV--MYLDGVKLGDVQ 992 (1191)
Q Consensus 915 ~~~~~~~~~~~klgdASiaaPFtsk~~~i~~v~~iir~GR~~Lvtt~~~fk~l~l~~li~~~s~sv--ly~~g~~~~d~Q 992 (1191)
|++++.++|++||++..+.-...+|..-..+..+..+.+ ++.....|+..|
T Consensus 674 ---------------------------~f~~i~~~i~~GR~~~~ni~k~i~~~l~~ni~~~~~~~~~~~~~~~~pl~~~q 726 (917)
T TIGR01116 674 ---------------------------NFATIVAAVEEGRAIYNNMKQFIRYMISSNIGEVVCIFLTAALGIPEGLIPVQ 726 (917)
T ss_pred ---------------------------CHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHcCCchHHHHH
Confidence 677899999999999998888877754433333222222 233336799999
Q ss_pred HHHHhHHHH-HHHHHhhccCCCCccccCCCC---CCccchhhHHHHHHHHHHHHHHHHHHhhhhcc---cCCC------C
Q 001010 993 ATISGVFTA-AFFLFISHARPLPTLSAARPH---PNIFCSYVFLSLMGQFAIHLFFLISSVKEAEK---YMPD------E 1059 (1191)
Q Consensus 993 ~~~~~~l~~-~~~~~~s~~~p~~~Ls~~rP~---~~if~~~~~~si~~Q~~i~~~~l~~~~~~~~~---~~~~------~ 1059 (1191)
+++.++++. ++.++++..+|.+++.+++|. .++|+..++.+++.+.++|.++.+..+.+... +.+. +
T Consensus 727 ll~inli~d~lp~~~l~~~~~~~~~m~~pP~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 806 (917)
T TIGR01116 727 LLWVNLVTDGLPATALGFNPPDKDIMWKPPRRPDEPLITGWLFFRYLVVGVYVGLATVGGFVWWYLLTHFTGCDEDSFTT 806 (917)
T ss_pred HHHHHHHHHHHHHHHHhcCCcchhHhcCCCCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCccccccccccc
Confidence 999999976 678899999999999776664 67999999999999988888663333222111 1000 0
Q ss_pred CCCCCCC----C-CCcccchhhhHHHHHHHHh-hheeEecCCC-cccccccchhHHHHHHHHHHHHHHhhcccchhhhhc
Q 001010 1060 CIEPDAD----F-HPNLVNTVSYMVNMMIQVA-TFAVNYMGHP-FNQSISENKPFMYALMGAVGFFTVITSDLLRSLNDW 1132 (1191)
Q Consensus 1060 ~~~~~~~----f-~p~~~nt~vfl~~~~~~i~-~~~v~~~g~P-f~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 1132 (1191)
..+.+.. + .+...-|..|....+.|+. .+.+-...++ |+.+++.|+++++++++..++.++++ .+|.++..
T Consensus 807 ~~~~~~~~~~~~~~~~~~~t~~f~~~v~~q~~~~~~~r~~~~~~~~~~~~~n~~~~~~~~~~~~l~~~~~--~v~~~~~~ 884 (917)
T TIGR01116 807 CPDFEDPDCYVFEGKQPARTISLSVLVVIEMFNALNALSEDQSLLRMPPWVNKWLIGAICLSMALHFLIL--YVPFLSRI 884 (917)
T ss_pred ccccccccccccccccchHHHHHHHHHHHHHHHHHHHcCCcccccccCCccCHHHHHHHHHHHHHHHHHH--HhHHHHHH
Confidence 0000000 0 1233458889988888885 3444454444 55577899999988887777665543 47889999
Q ss_pred cceeeCChhHH
Q 001010 1133 LKLVPLPSGLR 1143 (1191)
Q Consensus 1133 ~~lv~~p~~~~ 1143 (1191)
|+.+|++...+
T Consensus 885 f~~~~l~~~~w 895 (917)
T TIGR01116 885 FGVTPLSLTDW 895 (917)
T ss_pred hccCCCCHHHH
Confidence 99999885333
|
The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522. |
| >TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.4e-86 Score=861.63 Aligned_cols=748 Identities=21% Similarity=0.265 Sum_probs=514.1
Q ss_pred cCCCccCCCCCcHH----HHHHHHhhhHHHHHHHHHHHHHhhhh----HHHHHHHHHHHHH-HHH---HHHHHHHHHHHH
Q 001010 178 WGRNVFEYPQPTFQ----KLMKENCMEPFFVFQVFCVGLWCLDE----YWYYSLFTLFMLF-MFE---STMAKSRLKTLT 245 (1191)
Q Consensus 178 yG~N~i~i~~~s~~----~ll~~~~~~pf~vfqi~~v~lw~l~~----y~~ysl~~l~m~v-v~~---~~~~~~~~r~~~ 245 (1191)
|.+|.+...+.+++ ..|++||..|+++|.++..++-++.. .+...++.+++++ +.. ....++|.++.
T Consensus 1 ~~~N~i~tskY~~~~flp~~l~~qf~~~~N~yfl~i~ilq~ip~~s~~~~~t~~~pL~~v~~~~~~~~~~ed~~r~~~d- 79 (1057)
T TIGR01652 1 FCSNKISTTKYTVLTFLPKNLFEQFKRFANLYFLVVALLQQVPILSPTYRGTSIVPLAFVLIVTAIKEAIEDIRRRRRD- 79 (1057)
T ss_pred CCCCcccCccCcchhhhHHHHHHHHHHHhhHHHHHHHHHHcCCCcCCCCccHhHHhHHHHHHHHHHHHHHHHHHHHHhH-
Confidence 67899988887654 78899999999988887777766532 1222223333222 222 22223333332
Q ss_pred HHHhhccCCceEEEEEC-CEEEEEecCCCCCCcEEEEcCCCCCCCCCceeeeeEEEEe-----cceeeecccccCCCCce
Q 001010 246 EIRRVRVDNQTIMVHRC-GKWVKLAGTDLVPGDVVSIGRSSGQTGEDKSVPADMLILG-----GSAIVNEAILTGESTPQ 319 (1191)
Q Consensus 246 ~l~~m~~~~~~v~V~R~-g~~~~I~s~eLvpGDIV~l~~g~gd~~~~~~VPaD~iLl~-----G~~~VdES~LTGES~Pv 319 (1191)
+++ .+..++|+|+ |+|++++++||+|||+|.|++| +.||||++|++ |.|.||||.|||||.|+
T Consensus 80 --~~~--n~~~~~v~~~~~~~~~i~~~~l~~GDiv~l~~g-------~~iPaD~~ll~ss~~~g~~~v~~s~l~GEs~~~ 148 (1057)
T TIGR01652 80 --KEV--NNRLTEVLEGHGQFVEIPWKDLRVGDIVKVKKD-------ERIPADLLLLSSSEPDGVCYVETANLDGETNLK 148 (1057)
T ss_pred --HHH--hCcEEEEECCCCcEEEeeeecccCCCEEEEcCC-------CcccceEEEEeccCCCceEEEEeeccCCeecce
Confidence 222 3578999997 8999999999999999999987 89999999997 77999999999999999
Q ss_pred ecccccCCC--------------------Ccccc------cc------ccCCCeeEeeceEEeecCCCCCCCCCCCCCcE
Q 001010 320 WKVSIMGRE--------------------TGEKL------SA------RRDKSHVLFGGTKILQHTPDKTFPLKTPDGGC 367 (1191)
Q Consensus 320 ~K~~i~~~~--------------------~~~~~------~~------~~~k~~~lfaGT~vlq~~~~~~~~~~~~~g~~ 367 (1191)
.|.+.+... ..+.+ .. .-+..|+++.||.+.+ .|.+
T Consensus 149 ~k~~~~~~~~~~~~~~~~~~~~~i~~~~p~~~l~~F~G~~~~~~~~~~~l~~~N~l~rGs~l~n------------t~~~ 216 (1057)
T TIGR01652 149 LRQALEETQKMLDEDDIKNFSGEIECEQPNASLYSFQGNMTINGDRQYPLSPDNILLRGCTLRN------------TDWV 216 (1057)
T ss_pred EeecchhhhccCChhhHhhceEEEEEcCCCCcceEEEEEEEECCCCcccCCHHHhHhcCCEecC------------CCeE
Confidence 998754211 00000 00 0123566777777762 4899
Q ss_pred EEEEEEecccchhhHHHHHhccccccccchhhhHHHHHHHHHH----HHHHhhh--eeeeec-----c----cCC----C
Q 001010 368 LAVVLRTGFETSQGKLMRTILFSTERVTANSWESGLFILFLVV----FAVIAAG--YVLKKG-----M----EDP----T 428 (1191)
Q Consensus 368 ~~vV~~TG~~T~~Gkl~r~i~~~~~~~~~~~~~~~~fi~~lli----~aii~~~--~~~~~~-----~----~~~----~ 428 (1191)
.|+|++||.+|..|+ +...++.+.++.++....++.++++ ++++++. ++|... + ... .
T Consensus 217 ~gvVvyTG~~Tk~~~---n~~~~~~k~s~le~~ln~~~~~l~~~~i~l~~i~~i~~~~~~~~~~~~~~yl~~~~~~~~~~ 293 (1057)
T TIGR01652 217 IGVVVYTGHDTKLMR---NATQAPSKRSRLEKELNFLIIILFCLLFVLCLISSVGAGIWNDAHGKDLWYIRLDVSERNAA 293 (1057)
T ss_pred EEEEEEEchhhhhhh---cCCCCcccccHHHHHHhhHHHHHHHHHHHHHHHHHHHHHheecccCCCccceecCcccccch
Confidence 999999999996554 4434444556666665555443332 2222222 122110 0 000 0
Q ss_pred cchhHHHHHHHHhhhhccCCCcchHHHHHHHHHH------HHHHhc----CccccCCCcccccCCccEEEecccccccCC
Q 001010 429 RSKYKLFLSCSLIITSVIPPELPMELSIAVNTSL------IALARR----GIFCTEPFRIPFAGKVDMCCFDKTGTLTSD 498 (1191)
Q Consensus 429 ~~~~~~~l~~i~iit~~vP~~LP~~lslav~~s~------~~L~k~----~I~~~~p~~i~~~G~vd~icfDKTGTLT~~ 498 (1191)
......++.++.++..++|.+||+.++++..... .+|.++ ++.+++...+|.+|+|+++|+|||||||+|
T Consensus 294 ~~~~~~~~~~~~L~~~~IPisL~v~l~l~~~~~~~~i~~D~~m~~~~~~~~~~vr~~~~~E~LG~v~~I~sDKTGTLT~N 373 (1057)
T TIGR01652 294 ANGFFSFLTFLILFSSLIPISLYVSLELVKSVQAYFINSDLQMYHEKTDTPASVRTSNLNEELGQVEYIFSDKTGTLTQN 373 (1057)
T ss_pred hHHHHHHHHHHHHHhhhcceeeeehHHHHHHHHHHHHhhhhhhhccccCCcceeecCCChHHhcCeeEEEEcCCCceeee
Confidence 1122356778889999999999999999988877 677764 499999999999999999999999999999
Q ss_pred ceEEEEEeecCC---Cc-----------cc----------cc--------------c--C----CCchHHHHHHhhccce
Q 001010 499 DMEFRGVVGLSN---AE-----------LE----------DD--------------M--T----KVPVRTQEILASCHAL 534 (1191)
Q Consensus 499 ~l~v~gv~~~~~---~~-----------~~----------~~--------------~--~----~~~~~~~~~la~chsl 534 (1191)
+|.++++...+. .. .. .+ . . +.-.+...+++.||++
T Consensus 374 ~M~~~~~~i~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~lC~~v 453 (1057)
T TIGR01652 374 IMEFKKCSIAGVSYGDGFTEIKDAIRERLGSYVENENSMLVESKGFTFVDPRLVDLLKTNKPNAKRINEFFLALALCHTV 453 (1057)
T ss_pred eEEEEEEEECCEEecCCcchHHHHhhhcccccccccccccccccccccCcHHHHHhhhcCCchhHHHHHHHHHHHhcCcc
Confidence 999999864221 00 00 00 0 0 0012345688999998
Q ss_pred EEe--CCc---c---cCChHHHHHHhcc---cccccCCCcc-----ccCCCCCCcccEEEEecCCCCCCcEEEEEEeCC-
Q 001010 535 VFV--DNK---L---VGDPLEKAALKGI---DWSYKSDEKA-----MPKRGGGNAVQIVQRHHFASHLKRMSVVVRVQE- 597 (1191)
Q Consensus 535 ~~~--~~~---~---~GdPle~all~~~---~~~~~~~~~~-----~~~~~~~~~~~il~~~~Fss~~krmsvvv~~~~- 597 (1191)
... +++ + .|+|.|.|+++++ ||.+...... ....+....+++++.+||+|++|||||+++.++
T Consensus 454 ~~~~~~~~~~~~~y~~~sp~E~ALl~~a~~~g~~~~~~~~~~~~~~i~~~~~~~~~~il~~~pF~s~rKrmSviv~~~~~ 533 (1057)
T TIGR01652 454 VPEFNDDGPEEITYQAASPDEAALVKAARDVGFVFFERTPKSISLLIEMHGETKEYEILNVLEFNSDRKRMSVIVRNPDG 533 (1057)
T ss_pred cccccCCCCCceEEEccCCcHHHHHHHHHHCCCEEEEecCCceEEEEEeCCCEEEEEEEEecccCCCCCeEEEEEEeCCC
Confidence 754 222 1 5899999999864 5554332211 112234457999999999999999999999865
Q ss_pred eEEEEEeCcHHHHHHhccC----ChHHHHHHHHHHHHhcCeeeeEEEEeCCCCChhhhhh---------cc--------c
Q 001010 598 EFFAFVKGAPETIQDRLTD----LPSSYIETYKKYTHQGSRVLALAFKSLPDMTVSDARS---------LH--------R 656 (1191)
Q Consensus 598 ~~~~~~KGapE~I~~~~~~----~p~~~~~~~~~~a~~G~RVLalA~k~l~~~~~~~~~~---------~~--------r 656 (1191)
++++++|||||.|.++|.. .++.+.+.+++|+++|+|||++|||.+++.+..++.. .+ +
T Consensus 534 ~~~l~~KGA~e~il~~~~~~~~~~~~~~~~~~~~~a~~GlRtL~~A~k~l~~~e~~~~~~~~~~a~~~~~~r~~~~~~~~ 613 (1057)
T TIGR01652 534 RIKLLCKGADTVIFKRLSSGGNQVNEETKEHLENYASEGLRTLCIAYRELSEEEYEEWNEEYNEASTALTDREEKLDVVA 613 (1057)
T ss_pred eEEEEEeCcHHHHHHHhhccchhHHHHHHHHHHHHHHcCCcEEEEEEEECCHHHHHHHHHHHHHHHhhhhhHHHHHHHHH
Confidence 6889999999999999964 3566788899999999999999999997544332210 01 2
Q ss_pred cccccCeEEeeeecccCcCCchhHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCcEEEeecCCCceeeecCCC
Q 001010 657 DEVENGLTFAGFAVFNCPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLILCPVKNGKVYEWVSPD 736 (1191)
Q Consensus 657 ~~~E~dL~flG~l~~~d~lK~da~~~I~~L~~agi~vvMiTGDn~~TA~~VA~~~gI~~~~~~il~~~~~~~~~~w~~~d 736 (1191)
+++|+||+|+|+++++||||+|++++|+.|++|||++||+|||+++||++||++|||++++..++.-..+.. -.+...+
T Consensus 614 ~~iE~~L~~lG~~gieD~lq~~v~etI~~L~~AGIkv~mlTGD~~~TA~~IA~~~~ii~~~~~~~~i~~~~~-~~~~~~~ 692 (1057)
T TIGR01652 614 ESIEKDLILLGATAIEDKLQEGVPETIELLRQAGIKIWVLTGDKVETAINIGYSCRLLSRNMEQIVITSESL-DATRSVE 692 (1057)
T ss_pred HHHHhcCEEEEEEEEhhhhhhccHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCeEEEEecCch-hhhHHHH
Confidence 568999999999999999999999999999999999999999999999999999999965432221111000 0000000
Q ss_pred ccccccCCh----HHH--hcccccceEEEechhhhhhcch---HHHHhhcCcce--EEeecChhhHHHHHHHHhHc-CCE
Q 001010 737 ETEKIQYSE----KEV--EGLTDAHDLCIGGDCFEMLQQT---SAVLRVIPYVK--VFARVAPEQKELILTTFKAV-GRM 804 (1191)
Q Consensus 737 ~~~~~~~~~----~~~--~~~~~~~~l~itG~~l~~l~~~---~~~~~~l~~~~--VfAR~sP~qK~~iV~~Lq~~-g~~ 804 (1191)
+ .+.... .+. .....++.++++|+.++.+.++ ..+.+++.+++ ||||++|+||.++|+.+|+. |++
T Consensus 693 ~--~i~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vV~aR~sP~qK~~IV~~lk~~~~~~ 770 (1057)
T TIGR01652 693 A--AIKFGLEGTSEEFNNLGDSGNVALVIDGKSLGYALDEELEKEFLQLALKCKAVICCRVSPSQKADVVRLVKKSTGKT 770 (1057)
T ss_pred H--HHHHHHHHHHHhhhhhccCCceEEEEccHHHHHHHhhHHHHHHHHHHhhCCEEEEeCCCHHHHHHHHHHHHhcCCCe
Confidence 0 000000 000 0112456799999999987764 34666776555 99999999999999999998 999
Q ss_pred EEEEcCCccCHHHHhhCCceEEeccCCCccccccCCcccccccchhhhhccccccchhhhhhhhccCCCCCCccchhhhh
Q 001010 805 TLMCGDGTNDVGALKQAHVGVALLNAVPPTQSGNSSSEASKDENTKSVKSKKSKSASEAASKAMSLNSEGTSKGKASARL 884 (1191)
Q Consensus 805 V~m~GDG~ND~~ALk~AdVGIAl~~~~~e~~~~asdi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 884 (1191)
|+|||||+||++|||+|||||++.+....+
T Consensus 771 vl~iGDG~ND~~mlk~AdVGIgi~g~eg~q-------------------------------------------------- 800 (1057)
T TIGR01652 771 TLAIGDGANDVSMIQEADVGVGISGKEGMQ-------------------------------------------------- 800 (1057)
T ss_pred EEEEeCCCccHHHHhhcCeeeEecChHHHH--------------------------------------------------
Confidence 999999999999999999999887422111
Q ss_pred hhcccccccccchHHHHHHHHHHHHHHHHhhcCCCCCCCccccCcccccCCCccCcCCccchhhhh-hccchHHH-----
Q 001010 885 EANSRTAGNRHLTAAEMQREKLKKMMEELNEEGDGRSAPIVKLGDASMASPFTAKHASVAPTTDII-RQGRSTLV----- 958 (1191)
Q Consensus 885 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~klgdASiaaPFtsk~~~i~~v~~ii-r~GR~~Lv----- 958 (1191)
|.-||+|.- .+.+.+..+| .+||.+..
T Consensus 801 ---------------------------------------------A~~aaD~~i--~~F~~L~~lll~~GR~~~~r~~~~ 833 (1057)
T TIGR01652 801 ---------------------------------------------AVMASDFAI--GQFRFLTKLLLVHGRWSYKRISKM 833 (1057)
T ss_pred ---------------------------------------------HHHhhhhhh--hhHHHHHHHHHhhCHHHHHHHHHH
Confidence 233444443 2466777776 89998764
Q ss_pred HHHhhhHHHHHHHHHHHHHHHHhhhccccccchHHHHHhHHHH-HHHHHhhc--cCCCCccccCCC-------CCCccch
Q 001010 959 TTLQMFKILGLNCLATAYVLSVMYLDGVKLGDVQATISGVFTA-AFFLFISH--ARPLPTLSAARP-------HPNIFCS 1028 (1191)
Q Consensus 959 tt~~~fk~l~l~~li~~~s~svly~~g~~~~d~Q~~~~~~l~~-~~~~~~s~--~~p~~~Ls~~rP-------~~~if~~ 1028 (1191)
..+++||-+++-.+...|+....+..-..+.++|+++.+++++ ++.++++. .++.+.+..+.| ...+|+.
T Consensus 834 i~~~~~kn~~~~~~~~~~~~~~~~s~~~~~~~~~l~~~n~~~t~lp~~~l~~~d~~~~~~~l~~~P~ly~~~~~~~~~~~ 913 (1057)
T TIGR01652 834 ILYFFYKNLIFAIIQFWYSFYNGFSGQTLYEGWYMVLYNVFFTALPVISLGVFDQDVSASLSLRYPQLYREGQKGQGFST 913 (1057)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHhHHHHHHHHhcccCCHHHHHhChHHHHHhhhcCCCCH
Confidence 4466666655443333333322232223578889998887765 46666643 233344444444 4679999
Q ss_pred hhHHHHHHHHHHHHHHHHHHhhhh
Q 001010 1029 YVFLSLMGQFAIHLFFLISSVKEA 1052 (1191)
Q Consensus 1029 ~~~~si~~Q~~i~~~~l~~~~~~~ 1052 (1191)
..+...+++.++|.+..++.....
T Consensus 914 ~~f~~~~~~~~~~~~ii~~~~~~~ 937 (1057)
T TIGR01652 914 KTFWGWMLDGIYQSLVIFFFPMFA 937 (1057)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999987766654443
|
This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes. |
| >PLN03190 aminophospholipid translocase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.2e-80 Score=796.96 Aligned_cols=749 Identities=19% Similarity=0.235 Sum_probs=501.6
Q ss_pred hccCCCccCCCCCcHHHH----HHHHhhhHHHHHHHHHHHHHhhhhH----HHHHHHHHHHHHH----HHHHHHHHHHHH
Q 001010 176 EKWGRNVFEYPQPTFQKL----MKENCMEPFFVFQVFCVGLWCLDEY----WYYSLFTLFMLFM----FESTMAKSRLKT 243 (1191)
Q Consensus 176 ~~yG~N~i~i~~~s~~~l----l~~~~~~pf~vfqi~~v~lw~l~~y----~~ysl~~l~m~vv----~~~~~~~~~~r~ 243 (1191)
..|..|.+...+.+++.+ +++||..+.++|-++..++-++... ....++.++++++ -+...-+.|.++
T Consensus 85 ~~f~~N~i~TsKYt~~tFlP~~L~eQF~r~aN~YFL~I~ilq~ip~~s~~~~~t~~~PL~~vl~v~~ike~~Ed~~r~k~ 164 (1178)
T PLN03190 85 FEFAGNSIRTAKYSVFSFLPRNLFEQFHRVAYIYFLVIAVLNQLPQLAVFGRGASILPLAFVLLVTAVKDAYEDWRRHRS 164 (1178)
T ss_pred ccCCCCeeeccccccHHHHHHHHHHHHHhhhhHHHHHHHHHHhCCCcccCCcchHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 359999999998876655 4567777767766665555444321 1222222222222 222223333333
Q ss_pred HHHHHhhccCCceEEEEECCEEEEEecCCCCCCcEEEEcCCCCCCCCCceeeeeEEEEe-----cceeeecccccCCCCc
Q 001010 244 LTEIRRVRVDNQTIMVHRCGKWVKLAGTDLVPGDVVSIGRSSGQTGEDKSVPADMLILG-----GSAIVNEAILTGESTP 318 (1191)
Q Consensus 244 ~~~l~~m~~~~~~v~V~R~g~~~~I~s~eLvpGDIV~l~~g~gd~~~~~~VPaD~iLl~-----G~~~VdES~LTGES~P 318 (1191)
-++. ++..++|+|+|+++++++++|+|||+|.|++| +.+|||++|++ |.|.||||.|||||.|
T Consensus 165 d~~~-----N~~~~~v~~~~~~~~i~~~~i~vGDiv~v~~g-------e~iPaD~~ll~Ss~~~G~~~Vdts~LdGEt~~ 232 (1178)
T PLN03190 165 DRIE-----NNRLAWVLVDDQFQEKKWKDIRVGEIIKIQAN-------DTLPCDMVLLSTSDPTGVAYVQTINLDGESNL 232 (1178)
T ss_pred HHhh-----cCcEEEEEECCeEEEEeHHHCCCCCEEEECCC-------CEeeeeEEEEeccCCCceEEEEccccCCeeee
Confidence 3322 35789999999999999999999999999987 89999999997 8899999999999999
Q ss_pred eecccccCCC------------------Cccccccc-----------cCCCeeEeeceEEeecCCCCCCCCCCCCCcEEE
Q 001010 319 QWKVSIMGRE------------------TGEKLSAR-----------RDKSHVLFGGTKILQHTPDKTFPLKTPDGGCLA 369 (1191)
Q Consensus 319 v~K~~i~~~~------------------~~~~~~~~-----------~~k~~~lfaGT~vlq~~~~~~~~~~~~~g~~~~ 369 (1191)
+.|.+.+... +.+.+... -..+++|..|+.+.+ ...+.|
T Consensus 233 k~k~~~~~~~~~~~~~~~~~~~i~~e~Pn~~l~~F~G~i~~~~~~~~l~~~n~llRG~~Lrn------------T~~i~G 300 (1178)
T PLN03190 233 KTRYAKQETLSKIPEKEKINGLIKCEKPNRNIYGFQANMEVDGKRLSLGPSNIILRGCELKN------------TAWAIG 300 (1178)
T ss_pred eEecccchhhhcchhhhhceEEEEEeCCCccceeEEEEEEECCCcccCCccceeeccceecC------------CceEEE
Confidence 9998753211 00000000 011233444444331 468999
Q ss_pred EEEEecccchhhHHHHHhccccccccchhhhHHHHHHHHH----HHHHHhhhe--eeee-cccC---------------C
Q 001010 370 VVLRTGFETSQGKLMRTILFSTERVTANSWESGLFILFLV----VFAVIAAGY--VLKK-GMED---------------P 427 (1191)
Q Consensus 370 vV~~TG~~T~~Gkl~r~i~~~~~~~~~~~~~~~~fi~~ll----i~aii~~~~--~~~~-~~~~---------------~ 427 (1191)
+|++||.+| |++.+-..+..+.+..++....++..++ ++++++++. +|.. +..+ .
T Consensus 301 vVVYTG~dT---K~~~N~~~~~~K~S~le~~~N~~vi~l~~i~~~l~~i~~i~~~~~~~~~~~~~~yl~~~~~~~~~~~~ 377 (1178)
T PLN03190 301 VAVYCGRET---KAMLNNSGAPSKRSRLETRMNLEIIILSLFLIALCTIVSVCAAVWLRRHRDELDTIPFYRRKDFSEGG 377 (1178)
T ss_pred EEEEechhh---hHhhcCCCCCCCccHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccccccccccccc
Confidence 999999999 4444433333455555555544433222 222222211 2211 1000 0
Q ss_pred C--c-------chhHHHHHHHHhhhhccCCCcchHHHHHHHHHHHHHHhcC----------ccccCCCcccccCCccEEE
Q 001010 428 T--R-------SKYKLFLSCSLIITSVIPPELPMELSIAVNTSLIALARRG----------IFCTEPFRIPFAGKVDMCC 488 (1191)
Q Consensus 428 ~--~-------~~~~~~l~~i~iit~~vP~~LP~~lslav~~s~~~L~k~~----------I~~~~p~~i~~~G~vd~ic 488 (1191)
. . .....++.++.++..+||.+|++.+.++.......+.+.. +.|++....|.+|+|+++|
T Consensus 378 ~~~~~~~~~~~~~~~~f~~~lil~~~~IPISL~Vtleivk~~qa~~I~~D~~m~~~~~~~~~~vr~snl~EeLGqV~yIf 457 (1178)
T PLN03190 378 PKNYNYYGWGWEIFFTFLMSVIVFQIMIPISLYISMELVRVGQAYFMIRDDQMYDEASNSRFQCRALNINEDLGQIKYVF 457 (1178)
T ss_pred ccccccchhhHHHHHHHHHHHHHHHhhcceeeeeeHHHHHHHHHHHHHhhhhcccccCCCcceeccCcchhhhccceEEE
Confidence 0 0 0122344556677789999999999999866455554433 6689999999999999999
Q ss_pred ecccccccCCceEEEEEeecC-----CC--------c----ccc-----c--c------------C-CC-----chHHHH
Q 001010 489 FDKTGTLTSDDMEFRGVVGLS-----NA--------E----LED-----D--M------------T-KV-----PVRTQE 526 (1191)
Q Consensus 489 fDKTGTLT~~~l~v~gv~~~~-----~~--------~----~~~-----~--~------------~-~~-----~~~~~~ 526 (1191)
+|||||||+|.|.++.+...+ +. . ... . . . .. -.+...
T Consensus 458 SDKTGTLT~N~M~fk~~~i~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~fl~ 537 (1178)
T PLN03190 458 SDKTGTLTENKMEFQCASIWGVDYSDGRTPTQNDHAGYSVEVDGKILRPKMKVKVDPQLLELSKSGKDTEEAKHVHDFFL 537 (1178)
T ss_pred EcCCCccccceEEEEEEEECCEEcccccccchhhhhccccccccccccccccccCCHHHHhhhhccccchhhHHHHHHHH
Confidence 999999999999999875321 00 0 000 0 0 0 00 023567
Q ss_pred HHhhccceEEe--CC---------cccC-ChHHHHHHhcc---cccccCCCc---cccCCCCCCcccEEEEecCCCCCCc
Q 001010 527 ILASCHALVFV--DN---------KLVG-DPLEKAALKGI---DWSYKSDEK---AMPKRGGGNAVQIVQRHHFASHLKR 588 (1191)
Q Consensus 527 ~la~chsl~~~--~~---------~~~G-dPle~all~~~---~~~~~~~~~---~~~~~~~~~~~~il~~~~Fss~~kr 588 (1191)
+++.||++... ++ +..| +|.|.|+++++ |..+..... .....+....+++++.+||+|++||
T Consensus 538 ~lalChtv~~~~~~~~~~~~~~~~~Y~a~SPdE~ALv~~a~~~G~~l~~r~~~~i~i~~~~~~~~~~il~~~pF~S~rKr 617 (1178)
T PLN03190 538 ALAACNTIVPIVVDDTSDPTVKLMDYQGESPDEQALVYAAAAYGFMLIERTSGHIVIDIHGERQRFNVLGLHEFDSDRKR 617 (1178)
T ss_pred HHHhcCCceeeccCCCCCccccceEEecCCCcHHHHHHHHHHCCCeEecccCCeEEEeeccceecceeEEEecccccccE
Confidence 89999998652 21 1334 89999999875 333322221 1122344567999999999999999
Q ss_pred EEEEEEeC-CeEEEEEeCcHHHHHHhccC-----ChHHHHHHHHHHHHhcCeeeeEEEEeCCCCChhhhhh---------
Q 001010 589 MSVVVRVQ-EEFFAFVKGAPETIQDRLTD-----LPSSYIETYKKYTHQGSRVLALAFKSLPDMTVSDARS--------- 653 (1191)
Q Consensus 589 msvvv~~~-~~~~~~~KGapE~I~~~~~~-----~p~~~~~~~~~~a~~G~RVLalA~k~l~~~~~~~~~~--------- 653 (1191)
||||++.+ +++++++|||||.|.++|.. .++.+.+.+++|+++|+|||++|||++++.+++++..
T Consensus 618 MSvIv~~~~~~~~l~~KGA~e~il~~~~~~~~~~~~~~~~~~l~~~a~~GlRtL~lA~k~l~~~e~~~~~~~~~~a~~~~ 697 (1178)
T PLN03190 618 MSVILGCPDKTVKVFVKGADTSMFSVIDRSLNMNVIRATEAHLHTYSSLGLRTLVVGMRELNDSEFEQWHFSFEAASTAL 697 (1178)
T ss_pred EEEEEEcCCCcEEEEEecCcHHHHHhhcccccchhHHHHHHHHHHHHhcCCceEEEEEEeCCHHHHhhHHHHHHHhhhhh
Confidence 99999975 46889999999999999953 4567888999999999999999999997544332211
Q ss_pred --------ccccccccCeEEeeeecccCcCCchhHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCcE--EEee
Q 001010 654 --------LHRDEVENGLTFAGFAVFNCPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVL--ILCP 723 (1191)
Q Consensus 654 --------~~r~~~E~dL~flG~l~~~d~lK~da~~~I~~L~~agi~vvMiTGDn~~TA~~VA~~~gI~~~~~~--il~~ 723 (1191)
.-++++|+||+|+|+++++||+|++++++|+.|+++||++||+|||++.||++||++|||++++.. ++..
T Consensus 698 ~~r~~~l~~~~~~iE~dL~~lG~~~~~D~lr~~v~~~I~~l~~agi~v~mlTGD~~~tAi~IA~s~~Ll~~~~~~i~i~~ 777 (1178)
T PLN03190 698 IGRAALLRKVASNVENNLTILGASAIEDKLQQGVPEAIESLRTAGIKVWVLTGDKQETAISIGYSSKLLTNKMTQIIINS 777 (1178)
T ss_pred hhhHHHHHhhHHhhhcCcEEEEEEEEecCCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHhCCCCCCCeeEEecC
Confidence 112568999999999999999999999999999999999999999999999999999999966532 2321
Q ss_pred cCCCceeeecCCCcc----ccccCC-----h--HHHhcccccceEEEechhhhhhcch---HHHHhhcCcce--EEeecC
Q 001010 724 VKNGKVYEWVSPDET----EKIQYS-----E--KEVEGLTDAHDLCIGGDCFEMLQQT---SAVLRVIPYVK--VFARVA 787 (1191)
Q Consensus 724 ~~~~~~~~w~~~d~~----~~~~~~-----~--~~~~~~~~~~~l~itG~~l~~l~~~---~~~~~~l~~~~--VfAR~s 787 (1191)
.. ....|...++. ...... . ........++.++++|+.++.+.+. ..+.++..++. ||||++
T Consensus 778 ~~--~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lVIdG~~L~~~l~~~~~~~f~~l~~~~~~VI~cR~s 855 (1178)
T PLN03190 778 NS--KESCRKSLEDALVMSKKLTTVSGISQNTGGSSAAASDPVALIIDGTSLVYVLDSELEEQLFQLASKCSVVLCCRVA 855 (1178)
T ss_pred Cc--hhhHHHHHHHHhhhhhhccccccccccccccccccCCceEEEEEcHHHHHHhhhHHHHHHHHHHHhCCEEEEecCC
Confidence 11 00011111000 000000 0 0000112356799999999998763 45777777665 799999
Q ss_pred hhhHHHHHHHHhHc-CCEEEEEcCCccCHHHHhhCCceEEeccCCCccccccCCcccccccchhhhhccccccchhhhhh
Q 001010 788 PEQKELILTTFKAV-GRMTLMCGDGTNDVGALKQAHVGVALLNAVPPTQSGNSSSEASKDENTKSVKSKKSKSASEAASK 866 (1191)
Q Consensus 788 P~qK~~iV~~Lq~~-g~~V~m~GDG~ND~~ALk~AdVGIAl~~~~~e~~~~asdi~~~~~~~~~~~~~~~~~~~~~~~~~ 866 (1191)
|+||+++|+.+|+. +++|+|||||+||++|||+|||||++.+....
T Consensus 856 P~QKa~IV~~vk~~~~~vtlaIGDGaNDv~mIq~AdVGIGIsG~EG~--------------------------------- 902 (1178)
T PLN03190 856 PLQKAGIVALVKNRTSDMTLAIGDGANDVSMIQMADVGVGISGQEGR--------------------------------- 902 (1178)
T ss_pred HHHHHHHHHHHHhcCCcEEEEECCCcchHHHHHhcCeeeeecCchhH---------------------------------
Confidence 99999999999997 58999999999999999999999987742221
Q ss_pred hhccCCCCCCccchhhhhhhcccccccccchHHHHHHHHHHHHHHHHhhcCCCCCCCccccCcccccCCCccCcCCccch
Q 001010 867 AMSLNSEGTSKGKASARLEANSRTAGNRHLTAAEMQREKLKKMMEELNEEGDGRSAPIVKLGDASMASPFTAKHASVAPT 946 (1191)
Q Consensus 867 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~klgdASiaaPFtsk~~~i~~v 946 (1191)
.|+.||+|+- +..+-+
T Consensus 903 --------------------------------------------------------------qA~~aSDfaI--~~Fr~L 918 (1178)
T PLN03190 903 --------------------------------------------------------------QAVMASDFAM--GQFRFL 918 (1178)
T ss_pred --------------------------------------------------------------HHHHhhccch--hhhHHH
Confidence 2555666664 456666
Q ss_pred hhhhh-ccchHHHHH-----HhhhHHHHHHHHHHHHHHHHhhhccccccchHHHHHhHH-HHHHHHHhhc-c--------
Q 001010 947 TDIIR-QGRSTLVTT-----LQMFKILGLNCLATAYVLSVMYLDGVKLGDVQATISGVF-TAAFFLFISH-A-------- 1010 (1191)
Q Consensus 947 ~~iir-~GR~~Lvtt-----~~~fk~l~l~~li~~~s~svly~~g~~~~d~Q~~~~~~l-~~~~~~~~s~-~-------- 1010 (1191)
..+|- +||.++..+ +.+||=+++....-.|+....|..-.-+.++-++..+++ ++++.++++- .
T Consensus 919 ~rLLlvHGr~~y~R~s~~i~y~fYKN~~~~~~qf~f~~~~~fSg~~ly~~~~~~~yN~~fTslPii~~~ifD~dv~~~~l 998 (1178)
T PLN03190 919 VPLLLVHGHWNYQRMGYMILYNFYRNAVFVLVLFWYVLFTCFTLTTAINEWSSVLYSVIYTALPTIVVGILDKDLSRRTL 998 (1178)
T ss_pred HHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHhHHHHHHHHhcccCCHHHH
Confidence 67666 999876544 555776665555445555555554444556656555554 4555444421 1
Q ss_pred CCCCccccCCCCCCccchhhHHHHHHHHHHHHHHHHHHhh
Q 001010 1011 RPLPTLSAARPHPNIFCSYVFLSLMGQFAIHLFFLISSVK 1050 (1191)
Q Consensus 1011 ~p~~~Ls~~rP~~~if~~~~~~si~~Q~~i~~~~l~~~~~ 1050 (1191)
.-.+.|.+.......||...+...++..++|-+..++...
T Consensus 999 ~~~P~LY~~~~~~~~~n~~~F~~w~~~~i~qs~iiff~~~ 1038 (1178)
T PLN03190 999 LKYPQLYGAGQRQEAYNSKLFWLTMIDTLWQSAVVFFVPL 1038 (1178)
T ss_pred HhCcHhhhhhccCCccCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1134677777778899999999999999999877666543
|
|
| >KOG0203 consensus Na+/K+ ATPase, alpha subunit [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.5e-82 Score=739.00 Aligned_cols=864 Identities=20% Similarity=0.216 Sum_probs=617.6
Q ss_pred CCChhhhHHhhhhcC-CCCCHHHHHHHHhccCCCccCCCCC-cHHHHHHHHhhhHHHHHHHHHHHHHhhhhHHHHH----
Q 001010 149 PYPTKETFGYYLKCT-GHSTEAKIAVATEKWGRNVFEYPQP-TFQKLMKENCMEPFFVFQVFCVGLWCLDEYWYYS---- 222 (1191)
Q Consensus 149 ~~~~~~~~~~~~~~~-g~ls~~e~~~~~~~yG~N~i~i~~~-s~~~ll~~~~~~pf~vfqi~~v~lw~l~~y~~ys---- 222 (1191)
..+.++.+++|.++. .|++.+++.+++.+.|+|.+..|+. +-|..|.+++++-|.+..+.+..+.++..+..++
T Consensus 41 ~~~~~eL~~r~~t~~~~Glt~~~A~~~L~rdG~NaL~Ppk~t~~wikf~kq~f~~~~ill~~~a~l~~~~y~~~~s~~~~ 120 (1019)
T KOG0203|consen 41 KLSVDELCERYGTSVSQGLTSQEAAEKLARDGPNALTPPKTTPEWIKFLRQLFGGFSILLWIGAILCFVAYGIQASTEDD 120 (1019)
T ss_pred cCCHHHHHHHhcCChhhcccHHHHHhhhccCCCCCCCCCCCChHHHHHHHHHhhhHHHHHHHHHHHHHHHHhhhcccCCC
Confidence 345677888888763 5667888999999999999999885 6777889999888876666555554443222211
Q ss_pred --------HHHHHHHH-HHHHHHHHHHH---HHHHHHHhhccCCceEEEEECCEEEEEecCCCCCCcEEEEcCCCCCCCC
Q 001010 223 --------LFTLFMLF-MFESTMAKSRL---KTLTEIRRVRVDNQTIMVHRCGKWVKLAGTDLVPGDVVSIGRSSGQTGE 290 (1191)
Q Consensus 223 --------l~~l~m~v-v~~~~~~~~~~---r~~~~l~~m~~~~~~v~V~R~g~~~~I~s~eLvpGDIV~l~~g~gd~~~ 290 (1191)
.+++...+ +......+|.. +-++.+++|. |..++|+|||+...+.++|||+||+|.++-|
T Consensus 121 ~~~~nly~giiL~~vv~vtg~~~~~qe~ks~~im~sF~~l~--P~~~~ViRdg~k~~i~~eelVvGD~v~vk~G------ 192 (1019)
T KOG0203|consen 121 PSDDNLYLGIVLAAVVIVTGLFSYYQEAKSSKIMDSFKNLV--PQQALVIRDGEKMTINAEELVVGDLVEVKGG------ 192 (1019)
T ss_pred CCCcceEEEEEEEEEEEEEecCCCccchhhHHHHHHHhccc--hhhheeeecceeEEechhhcccccceeeccC------
Confidence 11111111 11222233433 3355666665 8899999999999999999999999999976
Q ss_pred CceeeeeEEEEecc-eeeecccccCCCCceecccccCCCCccccccccCCCeeEeeceEEeecCCCCCCCCCCCCCcEEE
Q 001010 291 DKSVPADMLILGGS-AIVNEAILTGESTPQWKVSIMGRETGEKLSARRDKSHVLFGGTKILQHTPDKTFPLKTPDGGCLA 369 (1191)
Q Consensus 291 ~~~VPaD~iLl~G~-~~VdES~LTGES~Pv~K~~i~~~~~~~~~~~~~~k~~~lfaGT~vlq~~~~~~~~~~~~~g~~~~ 369 (1191)
++||||.+++++. |.||+|+|||||.|+...+...... + .+..|+-|.+|.++ +|.+.+
T Consensus 193 -drVPADiRiis~~g~~vdnsslTGesEP~~~~~~~t~~~--~----~Et~Ni~f~st~~v-------------eG~~~g 252 (1019)
T KOG0203|consen 193 -DRVPADIRIISATGCKVDNSSLTGESEPQTRSPEFTHEN--P----LETRNIAFFSTNCV-------------EGTGRG 252 (1019)
T ss_pred -CcccceeEEEEecceeEeccccccccCCccCCccccccC--c----hhheeeeeeeeEEe-------------cceEEE
Confidence 8999999999985 9999999999999999987543221 1 24689999999999 999999
Q ss_pred EEEEecccchhhHHHHHhccccccccchhhhHHHHHHHHHHHHHHhhheeeeecccCCCcchhHHHHHHHHhhhhccCCC
Q 001010 370 VVLRTGFETSQGKLMRTILFSTERVTANSWESGLFILFLVVFAVIAAGYVLKKGMEDPTRSKYKLFLSCSLIITSVIPPE 449 (1191)
Q Consensus 370 vV~~TG~~T~~Gkl~r~i~~~~~~~~~~~~~~~~fi~~lli~aii~~~~~~~~~~~~~~~~~~~~~l~~i~iit~~vP~~ 449 (1191)
+|++||.+|..|++......-....++..++...|+-++...|+...+.++..+.. .+..+...+...+.+++..+|.+
T Consensus 253 ivi~tGd~Tv~G~ia~l~~~~~~~~t~~~~ei~~fi~~it~vAi~~~i~fF~~~~~-~gy~~l~avv~~i~iivAnvPeG 331 (1019)
T KOG0203|consen 253 IVIATGDRTVMGRIASLASGLEDGKTPIAKEIEHFIHIITGVAIFLGISFFILALI-LGYEWLRAVVFLIGIIVANVPEG 331 (1019)
T ss_pred EEEecCCceEEeehhhhhccCCCCCCcchhhhhchHHHHHHHHHHHHHHHHHHHHh-hcchhHHHhhhhheeEEecCcCC
Confidence 99999999999999876655455667788888888877777776654443322221 13456667777889999999999
Q ss_pred cchHHHHHHHHHHHHHHhcCccccCCCcccccCCccEEEecccccccCCceEEEEEeecCC-C--cc-cc------ccCC
Q 001010 450 LPMELSIAVNTSLIALARRGIFCTEPFRIPFAGKVDMCCFDKTGTLTSDDMEFRGVVGLSN-A--EL-ED------DMTK 519 (1191)
Q Consensus 450 LP~~lslav~~s~~~L~k~~I~~~~p~~i~~~G~vd~icfDKTGTLT~~~l~v~gv~~~~~-~--~~-~~------~~~~ 519 (1191)
||..++.++....+||+++++++++..+++++|...++|.|||||||+|+|+|..+|-.+. + +. .+ +..+
T Consensus 332 L~~tvTv~LtltakrMa~Knc~vknLeavetlGsts~I~SDktGTlTqnrMtVahlw~d~~i~~~d~~~~~~~~~~~~~~ 411 (1019)
T KOG0203|consen 332 LLATVTVCLTLTAKRMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHLWFDNQIHEADTTEDQSGQSFDKSS 411 (1019)
T ss_pred ccceehhhHHHHHHHHhhceeEEeeeeheeecccceeEeecceeeEEecceEEEeeccCCceeeeechhhhhcccccccC
Confidence 9999999999999999999999999999999999999999999999999999999886443 0 00 00 0011
Q ss_pred C-chHHHHHHhhccceEEeCCc---------ccCChHHHHHHhcccccccCCCccccCCCCCCcccEEEEecCCCCCCcE
Q 001010 520 V-PVRTQEILASCHALVFVDNK---------LVGDPLEKAALKGIDWSYKSDEKAMPKRGGGNAVQIVQRHHFASHLKRM 589 (1191)
Q Consensus 520 ~-~~~~~~~la~chsl~~~~~~---------~~GdPle~all~~~~~~~~~~~~~~~~~~~~~~~~il~~~~Fss~~krm 589 (1191)
. -.....+...|+.++...|+ ..||+.|.|+++++...+..-.. -....+.+...||+|.+|..
T Consensus 412 ~~~~~l~r~~~lCn~a~~~~gq~dvPv~kk~v~G~~se~ALlk~~e~~~~~~~~------~R~~~~kv~eipfNSt~Kyq 485 (1019)
T KOG0203|consen 412 ATFIALSRIATLCNRAVFKPGQDDVPVLKRDVAGDASEVALLKFIELILGSVME------LRERNPKVAEIPFNSTNKYQ 485 (1019)
T ss_pred chHHHHHHHHHHhCcceecccccCCceeeeeccCCHHHHHHHHHHHHhcchHHH------HHHhhHHhhcCCcccccceE
Confidence 1 12445677789998876554 58999999999987654433111 11335566788999999999
Q ss_pred EEEEEeCC----eEEEEEeCcHHHHHHhccCC-------------hHHHHHHHHHHHHhcCeeeeEEEEeCCCCChhhhh
Q 001010 590 SVVVRVQE----EFFAFVKGAPETIQDRLTDL-------------PSSYIETYKKYTHQGSRVLALAFKSLPDMTVSDAR 652 (1191)
Q Consensus 590 svvv~~~~----~~~~~~KGapE~I~~~~~~~-------------p~~~~~~~~~~a~~G~RVLalA~k~l~~~~~~~~~ 652 (1191)
-.+....+ ++.+.+|||||.+.++|+++ .+.+.+.+.++...|.||++++++.+++..+.+.-
T Consensus 486 lsih~~~d~~~~~~~l~mKGape~il~~CSTi~i~g~e~pld~~~~~~f~~ay~~lg~~GerVlgF~~~~l~~~~~p~~~ 565 (1019)
T KOG0203|consen 486 LSIHETEDPSDPRFLLVMKGAPERILDRCSTILINGEEKPLDEKLKEAFQEAYLELGGLGERVLGFCDLELPDEKFPRGF 565 (1019)
T ss_pred EEEEecCCCCCccceeeecCChHHHHhhccceeecCCCCCcCHHHHHHHHHHHHHhhhcchHHHHHHHHhcchhcCCCce
Confidence 88887765 67889999999999999643 35677888999999999999999999754333221
Q ss_pred hccc---cccccCeEEeeeecccCcCCchhHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCcEEEeecCCCce
Q 001010 653 SLHR---DEVENGLTFAGFAVFNCPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLILCPVKNGKV 729 (1191)
Q Consensus 653 ~~~r---~~~E~dL~flG~l~~~d~lK~da~~~I~~L~~agi~vvMiTGDn~~TA~~VA~~~gI~~~~~~il~~~~~~~~ 729 (1191)
..+- ..--.+|.|+|++.+-||+|..+++++..||+|||+|+|+|||+|.||.++|+++||+..+..+..+
T Consensus 566 ~f~~d~~n~p~~nl~FlGl~s~idPPR~~vP~Av~~CrsAGIkvimVTgdhpiTAkAiA~~vgIi~~~~et~e~------ 639 (1019)
T KOG0203|consen 566 QFDTDDVNFPTDNLRFLGLISMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKSVGIISEGSETVED------ 639 (1019)
T ss_pred EeecCCCCCcchhccccchhhccCCCcccCchhhhhhhhhCceEEEEecCccchhhhhhhheeeecCCchhhhh------
Confidence 1111 1223689999999999999999999999999999999999999999999999999998533221110
Q ss_pred eeecCCCccccccCChHHHhcccccceEEEechhhhhhcchHHHHhhcCc--ceEEeecChhhHHHHHHHHhHcCCEEEE
Q 001010 730 YEWVSPDETEKIQYSEKEVEGLTDAHDLCIGGDCFEMLQQTSAVLRVIPY--VKVFARVAPEQKELILTTFKAVGRMTLM 807 (1191)
Q Consensus 730 ~~w~~~d~~~~~~~~~~~~~~~~~~~~l~itG~~l~~l~~~~~~~~~l~~--~~VfAR~sP~qK~~iV~~Lq~~g~~V~m 807 (1191)
.....+...++.+ ..+....+++|..+..+.+ +++.+++.+ --||||.||+||..||+..|++|.+|+.
T Consensus 640 -------~a~r~~~~v~~vn-~~~a~a~VihG~eL~~~~~-~qld~il~nh~eIVFARTSPqQKLiIVe~cQr~GaiVaV 710 (1019)
T KOG0203|consen 640 -------IAKRLNIPVEQVN-SRDAKAAVIHGSELPDMSS-EQLDELLQNHQEIVFARTSPQQKLIIVEGCQRQGAIVAV 710 (1019)
T ss_pred -------hHHhcCCcccccC-ccccceEEEecccccccCH-HHHHHHHHhCCceEEEecCccceEEeEhhhhhcCcEEEE
Confidence 0000111111110 1113568899999888766 556666663 3699999999999999999999999999
Q ss_pred EcCCccCHHHHhhCCceEEeccCCCccccccCCcccccccchhhhhccccccchhhhhhhhccCCCCCCccchhhhhhhc
Q 001010 808 CGDGTNDVGALKQAHVGVALLNAVPPTQSGNSSSEASKDENTKSVKSKKSKSASEAASKAMSLNSEGTSKGKASARLEAN 887 (1191)
Q Consensus 808 ~GDG~ND~~ALk~AdVGIAl~~~~~e~~~~asdi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 887 (1191)
+|||.||+||||.||||||||-+++++.|.++|+++.+|+|+++
T Consensus 711 TGDGVNDsPALKKADIGVAMGiaGSDvsKqAADmILLDDNFASI------------------------------------ 754 (1019)
T KOG0203|consen 711 TGDGVNDSPALKKADIGVAMGIAGSDVSKQAADMILLDDNFASI------------------------------------ 754 (1019)
T ss_pred eCCCcCCChhhcccccceeeccccchHHHhhcceEEecCcchhh------------------------------------
Confidence 99999999999999999999999999999999999999988544
Q ss_pred ccccccccchHHHHHHHHHHHHHHHHhhcCCCCCCCccccCcccccCCCccCcCCccchhhhhhccchHHHHHHhhhHHH
Q 001010 888 SRTAGNRHLTAAEMQREKLKKMMEELNEEGDGRSAPIVKLGDASMASPFTAKHASVAPTTDIIRQGRSTLVTTLQMFKIL 967 (1191)
Q Consensus 888 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~klgdASiaaPFtsk~~~i~~v~~iir~GR~~Lvtt~~~fk~l 967 (1191)
+.-+.|||-- |---|--
T Consensus 755 -----------------------------------------------------------VtGVEEGRLi----FDNLKKs 771 (1019)
T KOG0203|consen 755 -----------------------------------------------------------VTGVEEGRLI----FDNLKKS 771 (1019)
T ss_pred -----------------------------------------------------------eeecccceeh----hhhHHHH
Confidence 3334555532 2222333
Q ss_pred HHHHHHH------HHHHHHhhhccccccchHHHHHhHHHH-HHHHHhhccCCCCccccCCCCC----CccchhhHHHHHH
Q 001010 968 GLNCLAT------AYVLSVMYLDGVKLGDVQATISGVFTA-AFFLFISHARPLPTLSAARPHP----NIFCSYVFLSLMG 1036 (1191)
Q Consensus 968 ~l~~li~------~~s~svly~~g~~~~d~Q~~~~~~l~~-~~~~~~s~~~p~~~Ls~~rP~~----~if~~~~~~si~~ 1036 (1191)
..|+|.+ -|-+.+++-.--.+|-.|.+..++... ++++++++.+|-..+-++.|-. +|.|-..+.---+
T Consensus 772 IAYTLTsNipEI~PfL~fi~~giPLplgtitIL~IDLgTDmvPAiSLAYE~aEsDIM~r~PR~p~~D~LVN~rLi~~aY~ 851 (1019)
T KOG0203|consen 772 IAYTLTSNIPEITPFLLFILFGIPLPLGTVTILCIDLGTDIVPAISLAYEKAESDIMLRPPRNPKDDKLVNKRLISYSYL 851 (1019)
T ss_pred HHHHHHhcchhHhHHHHHHHhCCCcccchhhhhhhHhhcccchhhhHhccCchhhHHhcCCCCCcccccccchhHHHHHH
Confidence 3344432 222223332233356778888888875 5899999999999999888874 6777766665566
Q ss_pred HHHHHHH---HHHHHhhhhc-ccCCCC------------CCCCCCCCC-----------CcccchhhhHHHHHHHHhhhe
Q 001010 1037 QFAIHLF---FLISSVKEAE-KYMPDE------------CIEPDADFH-----------PNLVNTVSYMVNMMIQVATFA 1089 (1191)
Q Consensus 1037 Q~~i~~~---~l~~~~~~~~-~~~~~~------------~~~~~~~f~-----------p~~~nt~vfl~~~~~~i~~~~ 1089 (1191)
|+.+-.+ |+.|.+.+++ -|.|.+ ..|.+..+- ..-..|+.|......|++-.+
T Consensus 852 qIG~iqa~agF~tYFvima~nGf~P~~L~~ir~~W~d~~~~Dl~DsyGQeWtyeqRk~le~tc~taFfvsIvV~Q~adLi 931 (1019)
T KOG0203|consen 852 QIGMIQALAGFFTYFVIMAENGFLPRTLVGLREDWDDDGVNDLTDSYGQEWTYEQRKYLEYTCYTAFFISIVVVQWADLI 931 (1019)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCChHHHHhhHHhhhhhhhhhhhhhccccccHHHHHHHHHhhhhheeeeehHHhHhhHH
Confidence 6543322 2334444432 344432 111111110 111235666666677776444
Q ss_pred eEec--CCCcccccccchhHHHHHHHHHHHHHHhhcccchhhhhccceeeCChhHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 001010 1090 VNYM--GHPFNQSISENKPFMYALMGAVGFFTVITSDLLRSLNDWLKLVPLPSGLRDKLLIWAGLMFLGCYSWERFLRWA 1167 (1191)
Q Consensus 1090 v~~~--g~Pf~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~lv~~p~~~~~~l~~~~~~~~~~~~~~e~~~~~~ 1167 (1191)
+.-. -.=|.|+ .+|+.+.++++....++.++ -+.|.....+...|++..|++ +.+-..++.|++|.+-|++
T Consensus 932 i~KTRRnSlfqqG-mrN~vl~f~v~~e~~La~fl--~y~pg~~~~l~~~pl~~~~wl----~a~P~~ilIfvydE~Rk~~ 1004 (1019)
T KOG0203|consen 932 ICKTRRNSIFQQG-MRNKVLIFAVIFETCLACFL--CYCPGVLYALGMYPLKFQWWL----VAFPFGILIFVYDEVRKLF 1004 (1019)
T ss_pred hhhcchhHHHHhh-hhhhhHHHHHHHHHHHHHHH--hcCccHHHHhccCCCCcEEEE----ecccceeeeeeHHHHHhHh
Confidence 4322 2346777 78999999998877665554 456767777888777754332 2222344567788775544
Q ss_pred c
Q 001010 1168 F 1168 (1191)
Q Consensus 1168 ~ 1168 (1191)
.
T Consensus 1005 I 1005 (1019)
T KOG0203|consen 1005 I 1005 (1019)
T ss_pred h
Confidence 3
|
|
| >PRK14010 potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-77 Score=731.51 Aligned_cols=451 Identities=19% Similarity=0.228 Sum_probs=358.4
Q ss_pred HHHHHHHHhhccCCceEE-EEECCEEEEEecCCCCCCcEEEEcCCCCCCCCCceeeeeEEEEecceeeecccccCCCCce
Q 001010 241 LKTLTEIRRVRVDNQTIM-VHRCGKWVKLAGTDLVPGDVVSIGRSSGQTGEDKSVPADMLILGGSAIVNEAILTGESTPQ 319 (1191)
Q Consensus 241 ~r~~~~l~~m~~~~~~v~-V~R~g~~~~I~s~eLvpGDIV~l~~g~gd~~~~~~VPaD~iLl~G~~~VdES~LTGES~Pv 319 (1191)
+++.+.|+++.. +.+++ |.|||+|++|++++|+|||+|.+++| ++|||||++++|++.||||+|||||.|+
T Consensus 91 ~~~~~~L~~~~~-~~~a~~v~rdg~~~~I~a~eLv~GDiV~v~~G-------d~IPaDG~vieG~~~VDESaLTGES~PV 162 (673)
T PRK14010 91 KAQANALRQTQT-EMKARRIKQDGSYEMIDASDLKKGHIVRVATG-------EQIPNDGKVIKGLATVDESAITGESAPV 162 (673)
T ss_pred HHHHHHHHcCCC-cceEEEEEeCCEEEEEEHHHcCCCCEEEECCC-------CcccCCeEEEEcceEEecchhcCCCCce
Confidence 344555555542 23565 78999999999999999999999987 8999999999999999999999999999
Q ss_pred ecccccCCCCccccccccCCCeeEeeceEEeecCCCCCCCCCCCCCcEEEEEEEecccchhhHHHHHhccccccccchhh
Q 001010 320 WKVSIMGRETGEKLSARRDKSHVLFGGTKILQHTPDKTFPLKTPDGGCLAVVLRTGFETSQGKLMRTILFSTERVTANSW 399 (1191)
Q Consensus 320 ~K~~i~~~~~~~~~~~~~~k~~~lfaGT~vlq~~~~~~~~~~~~~g~~~~vV~~TG~~T~~Gkl~r~i~~~~~~~~~~~~ 399 (1191)
.|++- +++ +.+|+||.|. +|.+.++|++||.+|..||+++.+...++++++++.
T Consensus 163 ~K~~g------------~d~-~~V~aGT~v~-------------~G~~~i~Vta~g~~T~lgki~~lve~a~~~ktp~e~ 216 (673)
T PRK14010 163 IKESG------------GDF-DNVIGGTSVA-------------SDWLEVEITSEPGHSFLDKMIGLVEGATRKKTPNEI 216 (673)
T ss_pred eccCC------------Ccc-CeeecCceee-------------cceEEEEEEEecccCHHHHHHHHHhhccccCCHHHH
Confidence 99861 122 4499999999 899999999999999999999999877777777765
Q ss_pred hHHHHHHHHHHHHHHhhheeeeecccCCCcchhHHHHHHHHhhhhccCCCcchHHHHHHHHHHHHHHhcCccccCCCccc
Q 001010 400 ESGLFILFLVVFAVIAAGYVLKKGMEDPTRSKYKLFLSCSLIITSVIPPELPMELSIAVNTSLIALARRGIFCTEPFRIP 479 (1191)
Q Consensus 400 ~~~~fi~~lli~aii~~~~~~~~~~~~~~~~~~~~~l~~i~iit~~vP~~LP~~lslav~~s~~~L~k~~I~~~~p~~i~ 479 (1191)
....+...+.+++++...+++..... ..+...+...+.+++++||++||..++++...++.+|+|+|+++++...+|
T Consensus 217 ~l~~l~~~l~ii~l~~~~~~~~~~~~---~~~~~~~~~~val~V~~IP~aL~~~~~~~~~~g~~r~ak~gvLvk~~~avE 293 (673)
T PRK14010 217 ALFTLLMTLTIIFLVVILTMYPLAKF---LNFNLSIAMLIALAVCLIPTTIGGLLSAIGIAGMDRVTQFNILAKSGRSVE 293 (673)
T ss_pred HHHHHHHHHhHHHHHHHHHHHHHHhh---ccHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhhCCEEEeCcHHHH
Confidence 44333322222222221111111100 112233455666777889999999999999999999999999999999999
Q ss_pred ccCCccEEEecccccccCCceEEEEEeecCCCccccccCCCchHHHHHHhhccceEEeCCcccCChHHHHHHhccccccc
Q 001010 480 FAGKVDMCCFDKTGTLTSDDMEFRGVVGLSNAELEDDMTKVPVRTQEILASCHALVFVDNKLVGDPLEKAALKGIDWSYK 559 (1191)
Q Consensus 480 ~~G~vd~icfDKTGTLT~~~l~v~gv~~~~~~~~~~~~~~~~~~~~~~la~chsl~~~~~~~~GdPle~all~~~~~~~~ 559 (1191)
.+|++|++|||||||||+|++.+..+.+.++. ...+.....+.|... ..||+++|++++..-.
T Consensus 294 ~lg~v~vI~~DKTGTLT~Gn~~~~~~~~~~~~--------~~~~ll~~a~~~~~~-------s~~P~~~AIv~~a~~~-- 356 (673)
T PRK14010 294 TCGDVNVLILDKTGTITYGNRMADAFIPVKSS--------SFERLVKAAYESSIA-------DDTPEGRSIVKLAYKQ-- 356 (673)
T ss_pred HhhCCCEEEEeCCCcCCCCCeEEEEEEeCCCc--------cHHHHHHHHHHhcCC-------CCChHHHHHHHHHHHc--
Confidence 99999999999999999988887776543321 011223333344321 2499999999865311
Q ss_pred CCCccccCCCCCCcccEEEEecCCCCCCcEEEEEEeCCeEEEEEeCcHHHHHHhcc----CChHHHHHHHHHHHHhcCee
Q 001010 560 SDEKAMPKRGGGNAVQIVQRHHFASHLKRMSVVVRVQEEFFAFVKGAPETIQDRLT----DLPSSYIETYKKYTHQGSRV 635 (1191)
Q Consensus 560 ~~~~~~~~~~~~~~~~il~~~~Fss~~krmsvvv~~~~~~~~~~KGapE~I~~~~~----~~p~~~~~~~~~~a~~G~RV 635 (1191)
+.. . .....+..||++++|+|++.+ +++ .+.|||||.+.++|. ..|.++++..++++++|+|+
T Consensus 357 -~~~-~-------~~~~~~~~pF~~~~k~~gv~~--~g~--~i~kGa~~~il~~~~~~g~~~~~~~~~~~~~~a~~G~~~ 423 (673)
T PRK14010 357 -HID-L-------PQEVGEYIPFTAETRMSGVKF--TTR--EVYKGAPNSMVKRVKEAGGHIPVDLDALVKGVSKKGGTP 423 (673)
T ss_pred -CCC-c-------hhhhcceeccccccceeEEEE--CCE--EEEECCHHHHHHHhhhcCCCCchHHHHHHHHHHhCCCeE
Confidence 000 0 001123479999999999874 343 456999999999984 35777888888999999999
Q ss_pred eeEEEEeCCCCChhhhhhccccccccCeEEeeeecccCcCCchhHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCC
Q 001010 636 LALAFKSLPDMTVSDARSLHRDEVENGLTFAGFAVFNCPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVT 715 (1191)
Q Consensus 636 LalA~k~l~~~~~~~~~~~~r~~~E~dL~flG~l~~~d~lK~da~~~I~~L~~agi~vvMiTGDn~~TA~~VA~~~gI~~ 715 (1191)
++++ .|++++|++.++||+|||++++|++||++|++++|+||||+.||.+||+++||.
T Consensus 424 l~v~---------------------~~~~~lG~i~l~Dp~R~~a~e~I~~Lr~~GI~vvMiTGDn~~TA~aIA~elGI~- 481 (673)
T PRK14010 424 LVVL---------------------EDNEILGVIYLKDVIKDGLVERFRELREMGIETVMCTGDNELTAATIAKEAGVD- 481 (673)
T ss_pred EEEE---------------------ECCEEEEEEEeecCCcHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCc-
Confidence 9876 267899999999999999999999999999999999999999999999999994
Q ss_pred CCcEEEeecCCCceeeecCCCccccccCChHHHhcccccceEEEechhhhhhcchHHHHhhcCcceEEeecChhhHHHHH
Q 001010 716 KPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLTDAHDLCIGGDCFEMLQQTSAVLRVIPYVKVFARVAPEQKELIL 795 (1191)
Q Consensus 716 ~~~~il~~~~~~~~~~w~~~d~~~~~~~~~~~~~~~~~~~~l~itG~~l~~l~~~~~~~~~l~~~~VfAR~sP~qK~~iV 795 (1191)
.+|||++|+||.++|
T Consensus 482 -----------------------------------------------------------------~v~A~~~PedK~~iV 496 (673)
T PRK14010 482 -----------------------------------------------------------------RFVAECKPEDKINVI 496 (673)
T ss_pred -----------------------------------------------------------------eEEcCCCHHHHHHHH
Confidence 389999999999999
Q ss_pred HHHhHcCCEEEEEcCCccCHHHHhhCCceEEeccCCCccccccCCcccccc
Q 001010 796 TTFKAVGRMTLMCGDGTNDVGALKQAHVGVALLNAVPPTQSGNSSSEASKD 846 (1191)
Q Consensus 796 ~~Lq~~g~~V~m~GDG~ND~~ALk~AdVGIAl~~~~~e~~~~asdi~~~~~ 846 (1191)
+.||+.|+.|+|+|||+||+||||+|||||||+ ++++++++++|+++++|
T Consensus 497 ~~lQ~~G~~VaMtGDGvNDAPALa~ADVGIAMg-sGTdvAkeAADiVLldd 546 (673)
T PRK14010 497 REEQAKGHIVAMTGDGTNDAPALAEANVGLAMN-SGTMSAKEAANLIDLDS 546 (673)
T ss_pred HHHHhCCCEEEEECCChhhHHHHHhCCEEEEeC-CCCHHHHHhCCEEEcCC
Confidence 999999999999999999999999999999999 68999999999999777
|
|
| >PRK01122 potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-76 Score=721.41 Aligned_cols=456 Identities=20% Similarity=0.227 Sum_probs=365.1
Q ss_pred HHHHHHHHHHHHhhcc-CC-ceEEEEECCE-EEEEecCCCCCCcEEEEcCCCCCCCCCceeeeeEEEEecceeeeccccc
Q 001010 237 AKSRLKTLTEIRRVRV-DN-QTIMVHRCGK-WVKLAGTDLVPGDVVSIGRSSGQTGEDKSVPADMLILGGSAIVNEAILT 313 (1191)
Q Consensus 237 ~~~~~r~~~~l~~m~~-~~-~~v~V~R~g~-~~~I~s~eLvpGDIV~l~~g~gd~~~~~~VPaD~iLl~G~~~VdES~LT 313 (1191)
.+++.|..+.++++.. .+ ..++|+|||+ +++|++++|+|||+|.+++| +.||+||++++|.+.||||+||
T Consensus 84 ~~ae~ra~~~~~sL~~l~~~~~a~vir~g~~~~~V~~~eL~~GDiV~v~~G-------d~IPaDG~vieG~a~VDESaLT 156 (679)
T PRK01122 84 ALAEGRGKAQADSLRGAKKDTFARKLREPGAAEEVPATELRKGDIVLVEAG-------EIIPADGEVIEGVASVDESAIT 156 (679)
T ss_pred HHHHHHHHHHHHHHHhCCCCCeEEEEECCCEEEEEEHHHcCCCCEEEEcCC-------CEEEEEEEEEEccEEEEccccc
Confidence 3444444444444433 24 3699999988 99999999999999999987 8999999999999999999999
Q ss_pred CCCCceecccccCCCCccccccccCCCeeEeeceEEeecCCCCCCCCCCCCCcEEEEEEEecccchhhHHHHHhcccccc
Q 001010 314 GESTPQWKVSIMGRETGEKLSARRDKSHVLFGGTKILQHTPDKTFPLKTPDGGCLAVVLRTGFETSQGKLMRTILFSTER 393 (1191)
Q Consensus 314 GES~Pv~K~~i~~~~~~~~~~~~~~k~~~lfaGT~vlq~~~~~~~~~~~~~g~~~~vV~~TG~~T~~Gkl~r~i~~~~~~ 393 (1191)
|||.|+.|++- +..+.+|+||.|+ +|.+.+.|+++|.+|..||+++.+...+.+
T Consensus 157 GES~PV~K~~G-------------~~~~~V~aGT~v~-------------~G~~~i~Vta~g~~S~lgki~~lve~a~~~ 210 (679)
T PRK01122 157 GESAPVIRESG-------------GDFSSVTGGTRVL-------------SDWIVIRITANPGESFLDRMIALVEGAKRQ 210 (679)
T ss_pred CCCCceEeCCC-------------CccCeEEeceEEE-------------eeeEEEEEEEecccCHHHHHHHHHHhcccc
Confidence 99999999861 1123499999999 899999999999999999999988877766
Q ss_pred ccchhhhHHHHHHHH-----HHHHHHhhheeeeecccCCCcchhHHHHHHHHhhhhccCCCcchHHHHHHHHHHHHHHhc
Q 001010 394 VTANSWESGLFILFL-----VVFAVIAAGYVLKKGMEDPTRSKYKLFLSCSLIITSVIPPELPMELSIAVNTSLIALARR 468 (1191)
Q Consensus 394 ~~~~~~~~~~fi~~l-----li~aii~~~~~~~~~~~~~~~~~~~~~l~~i~iit~~vP~~LP~~lslav~~s~~~L~k~ 468 (1191)
+++++.....+...+ ++++.+..+ .++.+ .. ..+..++.+++++|||+|+..++++...++.+|+|+
T Consensus 211 ktp~e~al~~l~~~l~~i~l~~~~~~~~~-~~~~g-----~~--~~l~~~iallV~aiP~alg~l~~~i~i~g~~r~ak~ 282 (679)
T PRK01122 211 KTPNEIALTILLAGLTIIFLLVVATLPPF-AAYSG-----GA--LSITVLVALLVCLIPTTIGGLLSAIGIAGMDRVLQA 282 (679)
T ss_pred CCHHHHHHHHHHHhhhHHHHHHHHHHHHH-HHHhC-----ch--HHHHHHHHHHHHcccchhhhHHHHHHHHHHHHHhcC
Confidence 777665433222111 111111111 11112 11 256677889999999999999999999999999999
Q ss_pred CccccCCCcccccCCccEEEecccccccCCceEEEEEeecCCCccccccCCCchHHHHHHhhccceEEeCCcccCChHHH
Q 001010 469 GIFCTEPFRIPFAGKVDMCCFDKTGTLTSDDMEFRGVVGLSNAELEDDMTKVPVRTQEILASCHALVFVDNKLVGDPLEK 548 (1191)
Q Consensus 469 ~I~~~~p~~i~~~G~vd~icfDKTGTLT~~~l~v~gv~~~~~~~~~~~~~~~~~~~~~~la~chsl~~~~~~~~GdPle~ 548 (1191)
|+++++...+|.+|++|++|||||||||+|+|.+..+++.++.. ..+.....+.|... .-||..+
T Consensus 283 gvLvk~~~avE~lg~v~~I~~DKTGTLT~g~~~v~~~~~~~~~~--------~~~ll~~a~~~s~~-------s~hP~~~ 347 (679)
T PRK01122 283 NVIATSGRAVEAAGDVDTLLLDKTGTITLGNRQASEFLPVPGVT--------EEELADAAQLSSLA-------DETPEGR 347 (679)
T ss_pred CeeecCchHHHHhcCCCEEEEeCCCCCcCCcEEEEEEEeCCCCC--------HHHHHHHHHHhcCC-------CCCchHH
Confidence 99999999999999999999999999999999999987654310 11222333333221 2368889
Q ss_pred HHHhcccccccCCCccccCCCCCCcccEEEEecCCCCCCcEEEEEEeCCeEEEEEeCcHHHHHHhcc----CChHHHHHH
Q 001010 549 AALKGIDWSYKSDEKAMPKRGGGNAVQIVQRHHFASHLKRMSVVVRVQEEFFAFVKGAPETIQDRLT----DLPSSYIET 624 (1191)
Q Consensus 549 all~~~~~~~~~~~~~~~~~~~~~~~~il~~~~Fss~~krmsvvv~~~~~~~~~~KGapE~I~~~~~----~~p~~~~~~ 624 (1191)
|++++..-..+... ....+...+.+||++.+++|++.. ++ ..++|||||.+.+.|. .+|+++++.
T Consensus 348 AIv~~a~~~~~~~~-------~~~~~~~~~~~pF~s~~~~~gv~~--~g--~~~~kGa~e~il~~~~~~g~~~~~~~~~~ 416 (679)
T PRK01122 348 SIVVLAKQRFNLRE-------RDLQSLHATFVPFSAQTRMSGVDL--DG--REIRKGAVDAIRRYVESNGGHFPAELDAA 416 (679)
T ss_pred HHHHHHHhhcCCCc-------hhhccccceeEeecCcCceEEEEE--CC--EEEEECCHHHHHHHHHhcCCcChHHHHHH
Confidence 99886531111000 001134567789999988888754 33 4789999999999983 457888888
Q ss_pred HHHHHHhcCeeeeEEEEeCCCCChhhhhhccccccccCeEEeeeecccCcCCchhHHHHHHHHhcCCcEEEEcCCCHHHH
Q 001010 625 YKKYTHQGSRVLALAFKSLPDMTVSDARSLHRDEVENGLTFAGFAVFNCPIREDSAKILSELKNSSQDLAMITGDQALTA 704 (1191)
Q Consensus 625 ~~~~a~~G~RVLalA~k~l~~~~~~~~~~~~r~~~E~dL~flG~l~~~d~lK~da~~~I~~L~~agi~vvMiTGDn~~TA 704 (1191)
.++++++|.|++++|+ |++++|++.++||+|||++++|++||++||+++|+||||+.||
T Consensus 417 ~~~~a~~G~~~l~va~---------------------~~~~lG~i~l~D~~R~~~~eai~~Lr~~GI~vvMiTGDn~~TA 475 (679)
T PRK01122 417 VDEVARKGGTPLVVAE---------------------DNRVLGVIYLKDIVKPGIKERFAELRKMGIKTVMITGDNPLTA 475 (679)
T ss_pred HHHHHhCCCcEEEEEE---------------------CCeEEEEEEEeccCchhHHHHHHHHHHCCCeEEEECCCCHHHH
Confidence 9999999999999994 6789999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCCCCcEEEeecCCCceeeecCCCccccccCChHHHhcccccceEEEechhhhhhcchHHHHhhcCcceEEe
Q 001010 705 CYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLTDAHDLCIGGDCFEMLQQTSAVLRVIPYVKVFA 784 (1191)
Q Consensus 705 ~~VA~~~gI~~~~~~il~~~~~~~~~~w~~~d~~~~~~~~~~~~~~~~~~~~l~itG~~l~~l~~~~~~~~~l~~~~VfA 784 (1191)
.+||+++||. .+||
T Consensus 476 ~aIA~elGId------------------------------------------------------------------~v~A 489 (679)
T PRK01122 476 AAIAAEAGVD------------------------------------------------------------------DFLA 489 (679)
T ss_pred HHHHHHcCCc------------------------------------------------------------------EEEc
Confidence 9999999993 3899
Q ss_pred ecChhhHHHHHHHHhHcCCEEEEEcCCccCHHHHhhCCceEEeccCCCccccccCCccccccc
Q 001010 785 RVAPEQKELILTTFKAVGRMTLMCGDGTNDVGALKQAHVGVALLNAVPPTQSGNSSSEASKDE 847 (1191)
Q Consensus 785 R~sP~qK~~iV~~Lq~~g~~V~m~GDG~ND~~ALk~AdVGIAl~~~~~e~~~~asdi~~~~~~ 847 (1191)
|++|+||.++|+.||+.|+.|+|+|||+||+||||+|||||||+ ++++++++++|+++++|+
T Consensus 490 ~~~PedK~~iV~~lQ~~G~~VaMtGDGvNDAPALa~ADVGIAMg-sGTdvAkeAADiVLldd~ 551 (679)
T PRK01122 490 EATPEDKLALIRQEQAEGRLVAMTGDGTNDAPALAQADVGVAMN-SGTQAAKEAGNMVDLDSN 551 (679)
T ss_pred cCCHHHHHHHHHHHHHcCCeEEEECCCcchHHHHHhCCEeEEeC-CCCHHHHHhCCEEEeCCC
Confidence 99999999999999999999999999999999999999999999 789999999999997773
|
|
| >TIGR01497 kdpB K+-transporting ATPase, B subunit | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-72 Score=683.11 Aligned_cols=459 Identities=20% Similarity=0.210 Sum_probs=358.8
Q ss_pred HHHHHHHHHHHHhhcc-C-CceEEEEE-CCEEEEEecCCCCCCcEEEEcCCCCCCCCCceeeeeEEEEecceeeeccccc
Q 001010 237 AKSRLKTLTEIRRVRV-D-NQTIMVHR-CGKWVKLAGTDLVPGDVVSIGRSSGQTGEDKSVPADMLILGGSAIVNEAILT 313 (1191)
Q Consensus 237 ~~~~~r~~~~l~~m~~-~-~~~v~V~R-~g~~~~I~s~eLvpGDIV~l~~g~gd~~~~~~VPaD~iLl~G~~~VdES~LT 313 (1191)
.+++.|..++++++.. . +..++|+| ||++++|++++|+|||+|.+++| ++||+||++++|++.||||+||
T Consensus 85 ~~ae~ra~~~~~~L~~~~~~~~a~vlr~dg~~~~V~~~~L~~GDiV~V~~G-------d~IPaDG~vieG~~~VDESaLT 157 (675)
T TIGR01497 85 AVAEGRGKAQADSLKGTKKTTFAKLLRDDGAIDKVPADQLKKGDIVLVEAG-------DVIPCDGEVIEGVASVDESAIT 157 (675)
T ss_pred HHHHHHHHHHHHHHHhCCCCceEEEEeeCCEEEEEEHHHCCCCCEEEECCC-------CEEeeeEEEEEccEEEEccccc
Confidence 3444444444444433 2 34578885 89999999999999999999987 8999999999999999999999
Q ss_pred CCCCceecccccCCCCccccccccCCCeeEeeceEEeecCCCCCCCCCCCCCcEEEEEEEecccchhhHHHHHhcccccc
Q 001010 314 GESTPQWKVSIMGRETGEKLSARRDKSHVLFGGTKILQHTPDKTFPLKTPDGGCLAVVLRTGFETSQGKLMRTILFSTER 393 (1191)
Q Consensus 314 GES~Pv~K~~i~~~~~~~~~~~~~~k~~~lfaGT~vlq~~~~~~~~~~~~~g~~~~vV~~TG~~T~~Gkl~r~i~~~~~~ 393 (1191)
|||.|+.|++- +..+.+|+||.|. +|.+.++|+++|.+|..|++++.+...+.+
T Consensus 158 GES~PV~K~~g-------------~~~~~V~aGT~v~-------------~G~~~i~Vt~~g~~S~lgri~~lve~a~~~ 211 (675)
T TIGR01497 158 GESAPVIKESG-------------GDFASVTGGTRIL-------------SDWLVVECTANPGETFLDRMIALVEGAQRR 211 (675)
T ss_pred CCCCceeecCC-------------CCcceeecCcEEE-------------eeEEEEEEEEecccCHHHHHHHHHHhcccC
Confidence 99999999861 1122499999999 899999999999999999999998877766
Q ss_pred ccchhhhHHHHHHHHHHHHH-HhhheeeeecccCCCcchhHHHHHHHHhhhhccCCCcchHHHHHHHHHHHHHHhcCccc
Q 001010 394 VTANSWESGLFILFLVVFAV-IAAGYVLKKGMEDPTRSKYKLFLSCSLIITSVIPPELPMELSIAVNTSLIALARRGIFC 472 (1191)
Q Consensus 394 ~~~~~~~~~~fi~~lli~ai-i~~~~~~~~~~~~~~~~~~~~~l~~i~iit~~vP~~LP~~lslav~~s~~~L~k~~I~~ 472 (1191)
+++++.....+..++.++.+ +.+.+++...+. +. ...+...+.+++++||++|+..++.....++.||+|+|+++
T Consensus 212 ktplq~~l~~l~~~l~~v~li~~~~~~~~~~~~--~~--~~~~~~lvallV~aiP~aLg~l~~av~iag~~r~ar~gvLv 287 (675)
T TIGR01497 212 KTPNEIALTILLIALTLVFLLVTATLWPFAAYG--GN--AISVTVLVALLVCLIPTTIGGLLSAIGIAGMDRVLGFNVIA 287 (675)
T ss_pred CChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc--Ch--hHHHHHHHHHHHHhCchhhhhHHHHHHHHHHHHHHHCCeEe
Confidence 67766443333222221111 111111111111 11 12345567888999999888777777778999999999999
Q ss_pred cCCCcccccCCccEEEecccccccCCceEEEEEeecCCCccccccCCCchHHHHHHhhccceEEeCCcccCChHHHHHHh
Q 001010 473 TEPFRIPFAGKVDMCCFDKTGTLTSDDMEFRGVVGLSNAELEDDMTKVPVRTQEILASCHALVFVDNKLVGDPLEKAALK 552 (1191)
Q Consensus 473 ~~p~~i~~~G~vd~icfDKTGTLT~~~l~v~gv~~~~~~~~~~~~~~~~~~~~~~la~chsl~~~~~~~~GdPle~all~ 552 (1191)
++..++|.+|++|++|||||||||+|+|.+..+++.++. ...+.....+.|... ..||+++|+++
T Consensus 288 K~~~avE~lg~v~~I~~DKTGTLT~g~~~v~~~~~~~~~--------~~~~ll~~aa~~~~~-------s~hP~a~Aiv~ 352 (675)
T TIGR01497 288 TSGRAVEACGDVDTLLLDKTGTITLGNRLASEFIPAQGV--------DEKTLADAAQLASLA-------DDTPEGKSIVI 352 (675)
T ss_pred eCcHHHHHhhCCCEEEECCCCcccCCCeEEEEEEecCCC--------cHHHHHHHHHHhcCC-------CCCcHHHHHHH
Confidence 999999999999999999999999999999998764331 011223333344321 25799999988
Q ss_pred cccccccCCCccccCCCCCCcccEEEEecCCCCCCcEEEEEEeCCeEEEEEeCcHHHHHHhcc----CChHHHHHHHHHH
Q 001010 553 GIDWSYKSDEKAMPKRGGGNAVQIVQRHHFASHLKRMSVVVRVQEEFFAFVKGAPETIQDRLT----DLPSSYIETYKKY 628 (1191)
Q Consensus 553 ~~~~~~~~~~~~~~~~~~~~~~~il~~~~Fss~~krmsvvv~~~~~~~~~~KGapE~I~~~~~----~~p~~~~~~~~~~ 628 (1191)
+..- ...+.. .......+..||++..++|++... ++ ..++|||||.+.+.|. ..|+++++..+++
T Consensus 353 ~a~~-~~~~~~-------~~~~~~~~~~pf~~~~~~sg~~~~-~g--~~~~kGa~e~i~~~~~~~g~~~~~~~~~~~~~~ 421 (675)
T TIGR01497 353 LAKQ-LGIRED-------DVQSLHATFVEFTAQTRMSGINLD-NG--RMIRKGAVDAIKRHVEANGGHIPTDLDQAVDQV 421 (675)
T ss_pred HHHH-cCCCcc-------ccccccceEEEEcCCCcEEEEEEe-CC--eEEEECCHHHHHHHHHhcCCCCcHHHHHHHHHH
Confidence 6531 110000 011234567899999766665433 33 3789999999998873 4678888999999
Q ss_pred HHhcCeeeeEEEEeCCCCChhhhhhccccccccCeEEeeeecccCcCCchhHHHHHHHHhcCCcEEEEcCCCHHHHHHHH
Q 001010 629 THQGSRVLALAFKSLPDMTVSDARSLHRDEVENGLTFAGFAVFNCPIREDSAKILSELKNSSQDLAMITGDQALTACYVA 708 (1191)
Q Consensus 629 a~~G~RVLalA~k~l~~~~~~~~~~~~r~~~E~dL~flG~l~~~d~lK~da~~~I~~L~~agi~vvMiTGDn~~TA~~VA 708 (1191)
+++|.|++++|+ |.+++|++.++||+|||++++|++||++|++++|+||||+.||.++|
T Consensus 422 a~~G~r~l~va~---------------------~~~~lG~i~l~D~~Rp~a~eaI~~l~~~Gi~v~miTGD~~~ta~~iA 480 (675)
T TIGR01497 422 ARQGGTPLVVCE---------------------DNRIYGVIYLKDIVKGGIKERFAQLRKMGIKTIMITGDNRLTAAAIA 480 (675)
T ss_pred HhCCCeEEEEEE---------------------CCEEEEEEEecccchhHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHH
Confidence 999999999996 35899999999999999999999999999999999999999999999
Q ss_pred HHcCCCCCCcEEEeecCCCceeeecCCCccccccCChHHHhcccccceEEEechhhhhhcchHHHHhhcCcceEEeecCh
Q 001010 709 SQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLTDAHDLCIGGDCFEMLQQTSAVLRVIPYVKVFARVAP 788 (1191)
Q Consensus 709 ~~~gI~~~~~~il~~~~~~~~~~w~~~d~~~~~~~~~~~~~~~~~~~~l~itG~~l~~l~~~~~~~~~l~~~~VfAR~sP 788 (1191)
+++||. .++||++|
T Consensus 481 ~~lGI~------------------------------------------------------------------~v~a~~~P 494 (675)
T TIGR01497 481 AEAGVD------------------------------------------------------------------DFIAEATP 494 (675)
T ss_pred HHcCCC------------------------------------------------------------------EEEcCCCH
Confidence 999993 38999999
Q ss_pred hhHHHHHHHHhHcCCEEEEEcCCccCHHHHhhCCceEEeccCCCccccccCCcccccc
Q 001010 789 EQKELILTTFKAVGRMTLMCGDGTNDVGALKQAHVGVALLNAVPPTQSGNSSSEASKD 846 (1191)
Q Consensus 789 ~qK~~iV~~Lq~~g~~V~m~GDG~ND~~ALk~AdVGIAl~~~~~e~~~~asdi~~~~~ 846 (1191)
+||..+|+.+|+.|+.|+|+|||+||+|||++|||||||+ ++++.+++++|+++++|
T Consensus 495 edK~~~v~~lq~~g~~VamvGDG~NDapAL~~AdvGiAm~-~gt~~akeaadivLldd 551 (675)
T TIGR01497 495 EDKIALIRQEQAEGKLVAMTGDGTNDAPALAQADVGVAMN-SGTQAAKEAANMVDLDS 551 (675)
T ss_pred HHHHHHHHHHHHcCCeEEEECCCcchHHHHHhCCEeEEeC-CCCHHHHHhCCEEECCC
Confidence 9999999999999999999999999999999999999999 56888899999988766
|
One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR. |
| >COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-68 Score=650.35 Aligned_cols=462 Identities=26% Similarity=0.310 Sum_probs=385.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc-CCceEEEEE-CCEEEEEecCCCCCCcEEEEcCCCCCCCCCceeeee
Q 001010 220 YYSLFTLFMLFMFESTMAKSRLKTLTEIRRVRV-DNQTIMVHR-CGKWVKLAGTDLVPGDVVSIGRSSGQTGEDKSVPAD 297 (1191)
Q Consensus 220 ~ysl~~l~m~vv~~~~~~~~~~r~~~~l~~m~~-~~~~v~V~R-~g~~~~I~s~eLvpGDIV~l~~g~gd~~~~~~VPaD 297 (1191)
..+..+++++.+.+....+.+.|+.+.++++.. .|..+++++ ||++++|+.+||.|||+|.|++| ++||+|
T Consensus 175 ~~aa~ii~l~~~G~~LE~~a~~ra~~ai~~L~~l~p~~A~~~~~~~~~~~v~v~~v~~GD~v~VrpG-------E~IPvD 247 (713)
T COG2217 175 EEAAMLIFLFLLGRYLEARAKGRARRAIRALLDLAPKTATVVRGDGEEEEVPVEEVQVGDIVLVRPG-------ERIPVD 247 (713)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCEEEEEecCCcEEEEEHHHCCCCCEEEECCC-------CEecCC
Confidence 334444555555566666777777777877654 688997777 55699999999999999999998 899999
Q ss_pred EEEEecceeeecccccCCCCceecccccCCCCccccccccCCCeeEeeceEEeecCCCCCCCCCCCCCcEEEEEEEeccc
Q 001010 298 MLILGGSAIVNEAILTGESTPQWKVSIMGRETGEKLSARRDKSHVLFGGTKILQHTPDKTFPLKTPDGGCLAVVLRTGFE 377 (1191)
Q Consensus 298 ~iLl~G~~~VdES~LTGES~Pv~K~~i~~~~~~~~~~~~~~k~~~lfaGT~vlq~~~~~~~~~~~~~g~~~~vV~~TG~~ 377 (1191)
|++++|+..||||+|||||+|+.|.+ ++.+|+||.+. +|.....|+++|.+
T Consensus 248 G~V~~G~s~vDeS~iTGEs~PV~k~~----------------Gd~V~aGtiN~-------------~G~l~i~vt~~~~d 298 (713)
T COG2217 248 GVVVSGSSSVDESMLTGESLPVEKKP----------------GDEVFAGTVNL-------------DGSLTIRVTRVGAD 298 (713)
T ss_pred eEEEeCcEEeecchhhCCCCCEecCC----------------CCEEeeeEEEC-------------CccEEEEEEecCcc
Confidence 99999999999999999999999986 88999999999 89999999999999
Q ss_pred chhhHHHHHhccccccccch----hhhHHHHHHHHHHHHHHhhheeeeecccCCCcchhHHHHHHHHhhhhccCCCcchH
Q 001010 378 TSQGKLMRTILFSTERVTAN----SWESGLFILFLVVFAVIAAGYVLKKGMEDPTRSKYKLFLSCSLIITSVIPPELPME 453 (1191)
Q Consensus 378 T~~Gkl~r~i~~~~~~~~~~----~~~~~~fi~~lli~aii~~~~~~~~~~~~~~~~~~~~~l~~i~iit~~vP~~LP~~ 453 (1191)
|..+++++.+...+..+.+. ++.+.+|.+..++++++.+..|+..+- .++...+.+++.+++++|||+|.++
T Consensus 299 t~la~Ii~LVe~Aq~~Ka~iqrlaDr~a~~fvp~vl~ia~l~f~~w~~~~~----~~~~~a~~~a~avLVIaCPCALgLA 374 (713)
T COG2217 299 TTLARIIRLVEEAQSSKAPIQRLADRVASYFVPVVLVIAALTFALWPLFGG----GDWETALYRALAVLVIACPCALGLA 374 (713)
T ss_pred CHHHHHHHHHHHHhhCCchHHHHHHHHHHccHHHHHHHHHHHHHHHHHhcC----CcHHHHHHHHHhheeeeCccHHHhH
Confidence 99999999998877766654 455677888777777776664444331 3456678999999999999999999
Q ss_pred HHHHHHHHHHHHHhcCccccCCCcccccCCccEEEecccccccCCceEEEEEeecCCCccccccCCCchHHHHHHhhccc
Q 001010 454 LSIAVNTSLIALARRGIFCTEPFRIPFAGKVDMCCFDKTGTLTSDDMEFRGVVGLSNAELEDDMTKVPVRTQEILASCHA 533 (1191)
Q Consensus 454 lslav~~s~~~L~k~~I~~~~p~~i~~~G~vd~icfDKTGTLT~~~l~v~gv~~~~~~~~~~~~~~~~~~~~~~la~chs 533 (1191)
.++++..++.+.+|+||++|+...+|.++++|+++||||||||+|++.+..+...++ +..++|+...+
T Consensus 375 tP~ai~~g~g~aA~~GILiK~g~~LE~l~~v~tvvFDKTGTLT~G~p~v~~v~~~~~------------~e~~~L~laAa 442 (713)
T COG2217 375 TPTAILVGIGRAARRGILIKGGEALERLAKVDTVVFDKTGTLTEGKPEVTDVVALDG------------DEDELLALAAA 442 (713)
T ss_pred HHHHHHHHHHHHHhCceEEeChHHHHhhccCCEEEEeCCCCCcCCceEEEEEecCCC------------CHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999987643 11234444444
Q ss_pred eEEeCCcccCChHHHHHHhcccccccCCCccccCCCCCCcccEEEEecCCCCCCcEEEEEEeCCeEEEEEeCcHHHHHHh
Q 001010 534 LVFVDNKLVGDPLEKAALKGIDWSYKSDEKAMPKRGGGNAVQIVQRHHFASHLKRMSVVVRVQEEFFAFVKGAPETIQDR 613 (1191)
Q Consensus 534 l~~~~~~~~GdPle~all~~~~~~~~~~~~~~~~~~~~~~~~il~~~~Fss~~krmsvvv~~~~~~~~~~KGapE~I~~~ 613 (1191)
++. .+.||+.+|+.++..-.- ....+..+..| ..++....+++ .+..|+++.+.+.
T Consensus 443 lE~----~S~HPiA~AIv~~a~~~~------------~~~~~~~~~i~------G~Gv~~~v~g~--~v~vG~~~~~~~~ 498 (713)
T COG2217 443 LEQ----HSEHPLAKAIVKAAAERG------------LPDVEDFEEIP------GRGVEAEVDGE--RVLVGNARLLGEE 498 (713)
T ss_pred HHh----cCCChHHHHHHHHHHhcC------------CCCccceeeec------cCcEEEEECCE--EEEEcCHHHHhhc
Confidence 542 357999999998543110 00111111111 34666666664 5778999999877
Q ss_pred ccCChHHHHHHHHHHHHhcCeeeeEEEEeCCCCChhhhhhccccccccCeEEeeeecccCcCCchhHHHHHHHHhcCCcE
Q 001010 614 LTDLPSSYIETYKKYTHQGSRVLALAFKSLPDMTVSDARSLHRDEVENGLTFAGFAVFNCPIREDSAKILSELKNSSQDL 693 (1191)
Q Consensus 614 ~~~~p~~~~~~~~~~a~~G~RVLalA~k~l~~~~~~~~~~~~r~~~E~dL~flG~l~~~d~lK~da~~~I~~L~~agi~v 693 (1191)
-.+.+. +.+..+.+.++|..++.++. |.+++|++.++|++|||++++|++||+.|+++
T Consensus 499 ~~~~~~-~~~~~~~~~~~G~t~v~va~---------------------dg~~~g~i~~~D~~R~~a~~aI~~L~~~Gi~~ 556 (713)
T COG2217 499 GIDLPL-LSERIEALESEGKTVVFVAV---------------------DGKLVGVIALADELRPDAKEAIAALKALGIKV 556 (713)
T ss_pred CCCccc-hhhhHHHHHhcCCeEEEEEE---------------------CCEEEEEEEEeCCCChhHHHHHHHHHHCCCeE
Confidence 655655 67778889999999888884 55899999999999999999999999999999
Q ss_pred EEEcCCCHHHHHHHHHHcCCCCCCcEEEeecCCCceeeecCCCccccccCChHHHhcccccceEEEechhhhhhcchHHH
Q 001010 694 AMITGDQALTACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLTDAHDLCIGGDCFEMLQQTSAV 773 (1191)
Q Consensus 694 vMiTGDn~~TA~~VA~~~gI~~~~~~il~~~~~~~~~~w~~~d~~~~~~~~~~~~~~~~~~~~l~itG~~l~~l~~~~~~ 773 (1191)
+|+||||..||.+||+++||.
T Consensus 557 ~mLTGDn~~~A~~iA~~lGId----------------------------------------------------------- 577 (713)
T COG2217 557 VMLTGDNRRTAEAIAKELGID----------------------------------------------------------- 577 (713)
T ss_pred EEEcCCCHHHHHHHHHHcChH-----------------------------------------------------------
Confidence 999999999999999999993
Q ss_pred HhhcCcceEEeecChhhHHHHHHHHhHcCCEEEEEcCCccCHHHHhhCCceEEeccCCCccccccCCcccccc
Q 001010 774 LRVIPYVKVFARVAPEQKELILTTFKAVGRMTLMCGDGTNDVGALKQAHVGVALLNAVPPTQSGNSSSEASKD 846 (1191)
Q Consensus 774 ~~~l~~~~VfAR~sP~qK~~iV~~Lq~~g~~V~m~GDG~ND~~ALk~AdVGIAl~~~~~e~~~~asdi~~~~~ 846 (1191)
.|+|.+.|+||.++|+.||+.|++|+|+|||+||+|||++|||||||+. ++|++.+++|++++++
T Consensus 578 -------~v~AellPedK~~~V~~l~~~g~~VamVGDGINDAPALA~AdVGiAmG~-GtDvA~eaADvvL~~~ 642 (713)
T COG2217 578 -------EVRAELLPEDKAEIVRELQAEGRKVAMVGDGINDAPALAAADVGIAMGS-GTDVAIEAADVVLMRD 642 (713)
T ss_pred -------hheccCCcHHHHHHHHHHHhcCCEEEEEeCCchhHHHHhhcCeeEeecC-CcHHHHHhCCEEEecC
Confidence 3899999999999999999999999999999999999999999999996 8899999999999776
|
|
| >KOG0205 consensus Plasma membrane H+-transporting ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-69 Score=614.43 Aligned_cols=580 Identities=25% Similarity=0.307 Sum_probs=431.1
Q ss_pred CCCChhhhHHhhhhcCCCCCHHHHHHHHhccCCCccCCCCCcHHHHHHHHhhhHH-HHHHHHHHHHHhhh-------hHH
Q 001010 148 LPYPTKETFGYYLKCTGHSTEAKIAVATEKWGRNVFEYPQPTFQKLMKENCMEPF-FVFQVFCVGLWCLD-------EYW 219 (1191)
Q Consensus 148 ~~~~~~~~~~~~~~~~g~ls~~e~~~~~~~yG~N~i~i~~~s~~~ll~~~~~~pf-~vfqi~~v~lw~l~-------~y~ 219 (1191)
...|.+++++++..++.|++.+|+++|+++||+|+++.++.+-+..|+.-+.+|. +|++..++....+. +|-
T Consensus 19 ~~~p~eeVfeeL~~t~~GLt~~E~~eRlk~fG~NkleEkken~~lKFl~Fm~~PlswVMEaAAimA~~Lang~~~~~DW~ 98 (942)
T KOG0205|consen 19 EAIPIEEVFEELLCTREGLTSDEVEERLKIFGPNKLEEKKESKFLKFLGFMWNPLSWVMEAAAIMAIGLANGGGRPPDWQ 98 (942)
T ss_pred ccCchhhhHHHHhcCCCCCchHHHHHHHHhhCchhhhhhhhhHHHHHHHHHhchHHHHHHHHHHHHHHHhcCCCCCcchh
Confidence 3456788899998887788999999999999999999887776767777788998 67887765554443 443
Q ss_pred HHHHHHHHHHHHHHHHHH----HHHHHHHHHHHhhccCCceEEEEECCEEEEEecCCCCCCcEEEEcCCCCCCCCCceee
Q 001010 220 YYSLFTLFMLFMFESTMA----KSRLKTLTEIRRVRVDNQTIMVHRCGKWVKLAGTDLVPGDVVSIGRSSGQTGEDKSVP 295 (1191)
Q Consensus 220 ~ysl~~l~m~vv~~~~~~----~~~~r~~~~l~~m~~~~~~v~V~R~g~~~~I~s~eLvpGDIV~l~~g~gd~~~~~~VP 295 (1191)
.|..+ .. ++++.++.. ++.-....+|++- -..+..|+|||+|.++++++||||||++++.| ++||
T Consensus 99 DF~gI-~~-LLliNsti~FveE~nAGn~aa~L~a~--LA~KakVlRDGkw~E~eAs~lVPGDIlsik~G-------dIiP 167 (942)
T KOG0205|consen 99 DFVGI-CC-LLLINSTISFIEENNAGNAAAALMAG--LAPKAKVLRDGKWSEQEASILVPGDILSIKLG-------DIIP 167 (942)
T ss_pred hhhhh-he-eeeecceeeeeeccccchHHHHHHhc--cCcccEEeecCeeeeeeccccccCceeeeccC-------CEec
Confidence 33322 22 222233322 2222333444432 23578899999999999999999999999977 7999
Q ss_pred eeEEEEecc-eeeecccccCCCCceecccccCCCCccccccccCCCeeEeeceEEeecCCCCCCCCCCCCCcEEEEEEEe
Q 001010 296 ADMLILGGS-AIVNEAILTGESTPQWKVSIMGRETGEKLSARRDKSHVLFGGTKILQHTPDKTFPLKTPDGGCLAVVLRT 374 (1191)
Q Consensus 296 aD~iLl~G~-~~VdES~LTGES~Pv~K~~i~~~~~~~~~~~~~~k~~~lfaGT~vlq~~~~~~~~~~~~~g~~~~vV~~T 374 (1191)
||++|++|+ ..||+|.|||||.|+.|.+ ++.+|+||+|. .|++.++|++|
T Consensus 168 aDaRLl~gD~LkiDQSAlTGESLpvtKh~----------------gd~vfSgSTcK-------------qGE~eaVViAT 218 (942)
T KOG0205|consen 168 ADARLLEGDPLKIDQSALTGESLPVTKHP----------------GDEVFSGSTCK-------------QGEIEAVVIAT 218 (942)
T ss_pred CccceecCCccccchhhhcCCccccccCC----------------CCceecccccc-------------cceEEEEEEEe
Confidence 999999996 8899999999999999976 88899999999 69999999999
Q ss_pred cccchhhHHHHHhccccccccchhhh---HHHHHHHHHHHHHHhhheeeeecccCCCcchhHHHHHHHHhhh-hccCCCc
Q 001010 375 GFETSQGKLMRTILFSTERVTANSWE---SGLFILFLVVFAVIAAGYVLKKGMEDPTRSKYKLFLSCSLIIT-SVIPPEL 450 (1191)
Q Consensus 375 G~~T~~Gkl~r~i~~~~~~~~~~~~~---~~~fi~~lli~aii~~~~~~~~~~~~~~~~~~~~~l~~i~iit-~~vP~~L 450 (1191)
|..|..|+-...+-. ....--+++. ..-|...++++.++. .|....... .| .+.....-+.++. .-||.++
T Consensus 219 g~~TF~GkAA~LVds-t~~~GHFqkVLt~IGn~ci~si~~g~li-e~~vmy~~q--~R-~~r~~i~nLlvllIGgiPiam 293 (942)
T KOG0205|consen 219 GVHTFFGKAAHLVDS-TNQVGHFQKVLTGIGNFCICSIALGMLI-EITVMYPIQ--HR-LYRDGIDNLLVLLIGGIPIAM 293 (942)
T ss_pred ccceeehhhHHhhcC-CCCcccHHHHHHhhhhHHHHHHHHHHHH-HHHhhhhhh--hh-hhhhhhhheheeeeccccccc
Confidence 999999998887754 3333323322 222333222222221 111111111 12 2333333344444 4599999
Q ss_pred chHHHHHHHHHHHHHHhcCccccCCCcccccCCccEEEecccccccCCceEEEE--EeecCCCccccccCCCchHHHHHH
Q 001010 451 PMELSIAVNTSLIALARRGIFCTEPFRIPFAGKVDMCCFDKTGTLTSDDMEFRG--VVGLSNAELEDDMTKVPVRTQEIL 528 (1191)
Q Consensus 451 P~~lslav~~s~~~L~k~~I~~~~p~~i~~~G~vd~icfDKTGTLT~~~l~v~g--v~~~~~~~~~~~~~~~~~~~~~~l 528 (1191)
|..++..++.+..||+++|.+.+...+||.++.+|++|.|||||||.|++.+.. +... .+....+...++
T Consensus 294 PtVlsvTMAiGs~rLaqqgAItkrmtAIEemAGmdVLCSDKTGTLTlNkLSvdknl~ev~--------v~gv~~D~~~L~ 365 (942)
T KOG0205|consen 294 PTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEVF--------VKGVDKDDVLLT 365 (942)
T ss_pred ceeeeehhhHHHHHHHhcccHHHHHHHHHHhhCceEEeecCcCceeecceecCcCcceee--------ecCCChHHHHHH
Confidence 999999999999999999999999999999999999999999999999999876 2110 111222333333
Q ss_pred hhccceEEeCCcccCChHHHHHHhcccccccCCCccccCCCCCCcccEEEEecCCCCCCcEEEEEEeC-CeEEEEEeCcH
Q 001010 529 ASCHALVFVDNKLVGDPLEKAALKGIDWSYKSDEKAMPKRGGGNAVQIVQRHHFASHLKRMSVVVRVQ-EEFFAFVKGAP 607 (1191)
Q Consensus 529 a~chsl~~~~~~~~GdPle~all~~~~~~~~~~~~~~~~~~~~~~~~il~~~~Fss~~krmsvvv~~~-~~~~~~~KGap 607 (1191)
|+-.| ..+| -|.+|+|++..+.- | +.....++.++-+||+...||....+... ++.+.++||||
T Consensus 366 A~rAs--r~en---~DAID~A~v~~L~d---------P-Keara~ikevhF~PFnPV~Krta~ty~d~dG~~~r~sKGAP 430 (942)
T KOG0205|consen 366 AARAS--RKEN---QDAIDAAIVGMLAD---------P-KEARAGIKEVHFLPFNPVDKRTALTYIDPDGNWHRVSKGAP 430 (942)
T ss_pred HHHHh--hhcC---hhhHHHHHHHhhcC---------H-HHHhhCceEEeeccCCccccceEEEEECCCCCEEEecCCCh
Confidence 33333 3333 58999999997752 1 12234688999999999999987777664 47788999999
Q ss_pred HHHHHhc---cCChHHHHHHHHHHHHhcCeeeeEEEEeCCCCChhhhhhccccccccCeEEeeeecccCcCCchhHHHHH
Q 001010 608 ETIQDRL---TDLPSSYIETYKKYTHQGSRVLALAFKSLPDMTVSDARSLHRDEVENGLTFAGFAVFNCPIREDSAKILS 684 (1191)
Q Consensus 608 E~I~~~~---~~~p~~~~~~~~~~a~~G~RVLalA~k~l~~~~~~~~~~~~r~~~E~dL~flG~l~~~d~lK~da~~~I~ 684 (1191)
|.|.++| .++|+...+.+++|+++|+|-|++|++..++... +.-..-..|+|++-+.||+|.|+.++|+
T Consensus 431 eqil~l~~~~~~i~~~vh~~id~~AeRGlRSLgVArq~v~e~~~--------~~~g~pw~~~gllp~fdpprhdsa~tir 502 (942)
T KOG0205|consen 431 EQILKLCNEDHDIPERVHSIIDKFAERGLRSLAVARQEVPEKTK--------ESPGGPWEFVGLLPLFDPPRHDSAETIR 502 (942)
T ss_pred HHHHHHhhccCcchHHHHHHHHHHHHhcchhhhhhhhccccccc--------cCCCCCcccccccccCCCCccchHHHHH
Confidence 9999999 4689999999999999999999999998864321 1223567899999999999999999999
Q ss_pred HHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCC---cEEEeecCCCceeeecCCCccccccCChHHHhcccccceEEEec
Q 001010 685 ELKNSSQDLAMITGDQALTACYVASQVHIVTKP---VLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLTDAHDLCIGG 761 (1191)
Q Consensus 685 ~L~~agi~vvMiTGDn~~TA~~VA~~~gI~~~~---~~il~~~~~~~~~~w~~~d~~~~~~~~~~~~~~~~~~~~l~itG 761 (1191)
+-...|.+|.|+|||...-|...+|++|+-.+- .-.++..+++ .+.|
T Consensus 503 ral~lGv~VkmitgdqlaI~keTgrrlgmgtnmypss~llG~~~~~------------------------------~~~~ 552 (942)
T KOG0205|consen 503 RALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGLGKDG------------------------------SMPG 552 (942)
T ss_pred HHHhccceeeeecchHHHHHHhhhhhhccccCcCCchhhccCCCCC------------------------------CCCC
Confidence 999999999999999999999999999985321 1111110000 0001
Q ss_pred hhhhhhcchHHHHhhcCcceEEeecChhhHHHHHHHHhHcCCEEEEEcCCccCHHHHhhCCceEEeccCCCccccccCCc
Q 001010 762 DCFEMLQQTSAVLRVIPYVKVFARVAPEQKELILTTFKAVGRMTLMCGDGTNDVGALKQAHVGVALLNAVPPTQSGNSSS 841 (1191)
Q Consensus 762 ~~l~~l~~~~~~~~~l~~~~VfAR~sP~qK~~iV~~Lq~~g~~V~m~GDG~ND~~ALk~AdVGIAl~~~~~e~~~~asdi 841 (1191)
....+++.+..=||.+.|+||.++|+.||+.||.++|+|||+||+||||.||+|||..++ ++.++.++|+
T Consensus 553 ---------~~v~elie~adgfAgVfpehKy~iV~~Lq~r~hi~gmtgdgvndapaLKkAdigiava~a-tdaar~asdi 622 (942)
T KOG0205|consen 553 ---------SPVDELIEKADGFAGVFPEHKYEIVKILQERKHIVGMTGDGVNDAPALKKADIGIAVADA-TDAARSASDI 622 (942)
T ss_pred ---------CcHHHHhhhccCccccCHHHHHHHHHHHhhcCceecccCCCcccchhhcccccceeeccc-hhhhcccccE
Confidence 113344556678999999999999999999999999999999999999999999999854 4556666666
Q ss_pred cc
Q 001010 842 EA 843 (1191)
Q Consensus 842 ~~ 843 (1191)
++
T Consensus 623 Vl 624 (942)
T KOG0205|consen 623 VL 624 (942)
T ss_pred EE
Confidence 65
|
|
| >KOG0210 consensus P-type ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-67 Score=601.76 Aligned_cols=724 Identities=21% Similarity=0.286 Sum_probs=497.2
Q ss_pred HHHhccCCCccCCCCC---cH-HHHHHHHhhhHHHHHHHHHHHHHh--------hhhHHHHHHHHHHHHHHHHHHHHHHH
Q 001010 173 VATEKWGRNVFEYPQP---TF-QKLMKENCMEPFFVFQVFCVGLWC--------LDEYWYYSLFTLFMLFMFESTMAKSR 240 (1191)
Q Consensus 173 ~~~~~yG~N~i~i~~~---s~-~~ll~~~~~~pf~vfqi~~v~lw~--------l~~y~~ysl~~l~m~vv~~~~~~~~~ 240 (1191)
.++++|-+|++...+. +| ...+.+||..-+++|.+...+.-+ +..||..-.+.+.+.++-|+..-.+|
T Consensus 74 ~~~~r~~pn~v~nqKyn~~tF~p~vl~~qF~~F~nlyfll~alsQ~ip~~~ig~l~ty~~pl~fvl~itl~keavdd~~r 153 (1051)
T KOG0210|consen 74 YRRRRFPPNEVRNQKYNIFTFVPAVLFEQFKFFLNLYFLLVALSQLIPALKIGYLSTYWGPLGFVLTITLIKEAVDDLKR 153 (1051)
T ss_pred cccccCCCchhhhcccceEEeeHHHHHHHHHHHHHHHHHHHHHHhhCchheecchhhhhHHHHHHHHHHHHHHHHHHHHH
Confidence 4567899999987664 43 345566665555554433333222 23455444444444444444444444
Q ss_pred HHHHHHHHhhccCCceEEEE-ECCEEEEEecCCCCCCcEEEEcCCCCCCCCCceeeeeEEEEe-----cceeeecccccC
Q 001010 241 LKTLTEIRRVRVDNQTIMVH-RCGKWVKLAGTDLVPGDVVSIGRSSGQTGEDKSVPADMLILG-----GSAIVNEAILTG 314 (1191)
Q Consensus 241 ~r~~~~l~~m~~~~~~v~V~-R~g~~~~I~s~eLvpGDIV~l~~g~gd~~~~~~VPaD~iLl~-----G~~~VdES~LTG 314 (1191)
++.-++. ++...+++ |+|...+ +|+++.+||+|.+..+ ++||||++||+ |+|.+-.-.|.|
T Consensus 154 ~~rd~~~-----Nse~y~~ltr~~~~~~-~Ss~i~vGDvi~v~K~-------~RVPADmilLrTsd~sg~~FiRTDQLDG 220 (1051)
T KOG0210|consen 154 RRRDREL-----NSEKYTKLTRDGTRRE-PSSDIKVGDVIIVHKD-------ERVPADMILLRTSDKSGSCFIRTDQLDG 220 (1051)
T ss_pred HHhhhhh-----hhhhheeeccCCcccc-cccccccccEEEEecC-------CcCCcceEEEEccCCCCceEEeccccCC
Confidence 3322222 22333444 6776555 9999999999999986 89999999994 889999999999
Q ss_pred CCCceecccccCCC---Cc-ccccc--------------------c-------cCCCeeEeeceEEeecCCCCCCCCCCC
Q 001010 315 ESTPQWKVSIMGRE---TG-EKLSA--------------------R-------RDKSHVLFGGTKILQHTPDKTFPLKTP 363 (1191)
Q Consensus 315 ES~Pv~K~~i~~~~---~~-~~~~~--------------------~-------~~k~~~lfaGT~vlq~~~~~~~~~~~~ 363 (1191)
|+....|-|+|... .+ +...+ . -.-.|+|+++|.+.
T Consensus 221 ETDWKLrl~vp~tQ~l~~~~el~~i~v~Ae~P~kdIh~F~Gt~~~~d~~~~~~LsventLWanTVvA------------- 287 (1051)
T KOG0210|consen 221 ETDWKLRLPVPRTQHLTEDSELMEISVYAEKPQKDIHSFVGTFTITDSDKPESLSVENTLWANTVVA------------- 287 (1051)
T ss_pred cccceeeccchhhccCCcccchheEEEeccCcchhhHhhEEEEEEecCCCCCcccccceeeeeeeEe-------------
Confidence 99999888875311 00 00000 0 01257788888776
Q ss_pred CCcEEEEEEEecccchhhHHHHHhcc-ccc--cccchhhhHHHHHHHHHHHHHHhh-heeeeecccCCCcchhHHHHHHH
Q 001010 364 DGGCLAVVLRTGFETSQGKLMRTILF-STE--RVTANSWESGLFILFLVVFAVIAA-GYVLKKGMEDPTRSKYKLFLSCS 439 (1191)
Q Consensus 364 ~g~~~~vV~~TG~~T~~Gkl~r~i~~-~~~--~~~~~~~~~~~fi~~lli~aii~~-~~~~~~~~~~~~~~~~~~~l~~i 439 (1191)
+|+++|+|++||-+|. +++. +.+ +.-..+.|...+..+|.++.++.+ +.+...|+ +..|+..+++.+
T Consensus 288 s~t~~gvVvYTG~dtR------svMNts~pr~KvGllelEiN~ltKiL~~~vlvLs~vmv~~~g~---~~~wyi~~~Rfl 358 (1051)
T KOG0210|consen 288 SGTAIGVVVYTGRDTR------SVMNTSRPRSKVGLLELEINGLTKILFCFVLVLSIVMVAMKGF---GSDWYIYIIRFL 358 (1051)
T ss_pred cCcEEEEEEEecccHH------HHhccCCcccccceeeeecccHHHHHHHHHHHHHHHHHHhhcC---CCchHHHHHHHH
Confidence 7889999999999993 3322 233 333445555555555554444333 23445554 346788899999
Q ss_pred HhhhhccCCCcchHHHHHHHHHHHHHHh----cCccccCCCcccccCCccEEEecccccccCCceEEEEEeecCC-----
Q 001010 440 LIITSVIPPELPMELSIAVNTSLIALAR----RGIFCTEPFRIPFAGKVDMCCFDKTGTLTSDDMEFRGVVGLSN----- 510 (1191)
Q Consensus 440 ~iit~~vP~~LP~~lslav~~s~~~L~k----~~I~~~~p~~i~~~G~vd~icfDKTGTLT~~~l~v~gv~~~~~----- 510 (1191)
.++.+++|..|-..+.+|-..-.....+ -|..+++..--|.+|+|..+..|||||||+|+|.++.++-..-
T Consensus 359 lLFS~IIPISLRvnlDmaK~~ys~~i~~D~~IpgtvvRSstIPEeLGRIsylLtDKTGTLTqNEM~~KKiHLGTv~~s~e 438 (1051)
T KOG0210|consen 359 LLFSSIIPISLRVNLDMAKIVYSWQIEHDKNIPGTVVRSSTIPEELGRISYLLTDKTGTLTQNEMEFKKIHLGTVAYSAE 438 (1051)
T ss_pred HHHhhhceeEEEEehhHHHhhHhhhcccCCCCCceeeecCCChHHhcceEEEEecCcCccccchheeeeeeeeeeeccHh
Confidence 9999999999999999987766555544 2566777777778999999999999999999999999874321
Q ss_pred ---------Cccc---------------cccCCCchHHHHHHhhccceEEe---CCcc---cCChHHHHHHhcc---ccc
Q 001010 511 ---------AELE---------------DDMTKVPVRTQEILASCHALVFV---DNKL---VGDPLEKAALKGI---DWS 557 (1191)
Q Consensus 511 ---------~~~~---------------~~~~~~~~~~~~~la~chsl~~~---~~~~---~GdPle~all~~~---~~~ 557 (1191)
..+. .+.+..-.+..+.+|.||++... ||++ ...|.|.|+++.+ |.+
T Consensus 439 ~~~eV~~~i~s~~~~~~~~~~~~~~~~k~~~s~rv~~~V~alalCHNVTPv~e~~ge~sYQAaSPDEVAiVkwTe~VGl~ 518 (1051)
T KOG0210|consen 439 TMDEVSQHIQSLYTPGRNKGKGALSRVKKDMSARVRNAVLALALCHNVTPVFEDDGEVSYQAASPDEVAIVKWTETVGLK 518 (1051)
T ss_pred HHHHHHHHHHHhhCCCcccccccchhhcCcccHHHHHHHHHHHHhccCCcccCCCceEEeecCCCCeEEEEEeeeecceE
Confidence 0000 00111113567789999998732 3343 4789999998754 333
Q ss_pred ccCCCcc-c---cCCCCCCcccEEEEecCCCCCCcEEEEEEeC--CeEEEEEeCcHHHHHHhccCChHHHHHHHHHHHHh
Q 001010 558 YKSDEKA-M---PKRGGGNAVQIVQRHHFASHLKRMSVVVRVQ--EEFFAFVKGAPETIQDRLTDLPSSYIETYKKYTHQ 631 (1191)
Q Consensus 558 ~~~~~~~-~---~~~~~~~~~~il~~~~Fss~~krmsvvv~~~--~~~~~~~KGapE~I~~~~~~~p~~~~~~~~~~a~~ 631 (1191)
+..++.. + ...+....|+|++.|||+|+.|||++||+.+ ++...|.|||.-+|..+. ...++.+|....||++
T Consensus 519 L~~Rd~~~itL~~~~~~~~~yqIL~vFPFtsEtKRMGIIVr~e~~~evtfylKGAD~VMs~iV-q~NdWleEE~gNMARE 597 (1051)
T KOG0210|consen 519 LAKRDRHAITLRVPLDDELNYQILQVFPFTSETKRMGIIVRDETTEEVTFYLKGADVVMSGIV-QYNDWLEEECGNMARE 597 (1051)
T ss_pred EeecccceEEEecCCCcceeEEEEEEeccccccceeeEEEecCCCceEEEEEecchHHHhccc-ccchhhhhhhhhhhhh
Confidence 3333321 1 1123446799999999999999999999997 689999999998887654 4567888999999999
Q ss_pred cCeeeeEEEEeCCCCChhhhhh---------ccc---------cccccCeEEeeeecccCcCCchhHHHHHHHHhcCCcE
Q 001010 632 GSRVLALAFKSLPDMTVSDARS---------LHR---------DEVENGLTFAGFAVFNCPIREDSAKILSELKNSSQDL 693 (1191)
Q Consensus 632 G~RVLalA~k~l~~~~~~~~~~---------~~r---------~~~E~dL~flG~l~~~d~lK~da~~~I~~L~~agi~v 693 (1191)
|+|+|.+|.|.|++.+++..+. .+| ..+|.||.++|+.+.||+|++|++.+++.||+|||++
T Consensus 598 GLRtLVvakK~Ls~~eye~Fe~~y~~A~lSi~dR~~~ma~vv~~~LE~dlelL~LTGVEDkLQ~dVk~tLElLRNAgiki 677 (1051)
T KOG0210|consen 598 GLRTLVVAKKVLSEEEYEAFEEAYNAAKLSISDRDQKMANVVERYLERDLELLGLTGVEDKLQDDVKPTLELLRNAGIKI 677 (1051)
T ss_pred cceEEEEEecccCHHHHHHHHHHHHhhhCccchHHHHHHHHHHHHHHhhhHHhcccChHHHHhhhhHhHHHHHhhcCcEE
Confidence 9999999999998766554322 122 2579999999999999999999999999999999999
Q ss_pred EEEcCCCHHHHHHHHHHcCCCCCCcEEEeecCCCceeeecCCCccccccCChHHHhcc--cccceEEEechhhhhhcch-
Q 001010 694 AMITGDQALTACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGL--TDAHDLCIGGDCFEMLQQT- 770 (1191)
Q Consensus 694 vMiTGDn~~TA~~VA~~~gI~~~~~~il~~~~~~~~~~w~~~d~~~~~~~~~~~~~~~--~~~~~l~itG~~l~~l~~~- 770 (1191)
||+|||..+||+.||+..+++++++.+..-. ++..... .-.+++.+ ..+..++|.|+.++...+.
T Consensus 678 WMLTGDKlETA~ciAkSs~L~sR~q~ihv~~---------~v~sr~d---ah~eL~~lR~k~~~aLvi~G~Sl~~cl~yy 745 (1051)
T KOG0210|consen 678 WMLTGDKLETAICIAKSSRLFSRGQYIHVIR---------SVTSRGD---AHNELNNLRRKTDCALVIDGESLEFCLKYY 745 (1051)
T ss_pred EEEcCcchhheeeeehhccceecCceEEEEE---------ecCCchH---HHHHHHHhhcCCCcEEEEcCchHHHHHHHH
Confidence 9999999999999999999998876654311 1100000 01122222 2356799999999988775
Q ss_pred -HHHHhhcC--cceEEeecChhhHHHHHHHHhH-cCCEEEEEcCCccCHHHHhhCCceEEeccCCCccccccCCcccccc
Q 001010 771 -SAVLRVIP--YVKVFARVAPEQKELILTTFKA-VGRMTLMCGDGTNDVGALKQAHVGVALLNAVPPTQSGNSSSEASKD 846 (1191)
Q Consensus 771 -~~~~~~l~--~~~VfAR~sP~qK~~iV~~Lq~-~g~~V~m~GDG~ND~~ALk~AdVGIAl~~~~~e~~~~asdi~~~~~ 846 (1191)
+++.++.. ...|+||++|+||+++++.||+ .|..|+.+|||.||++|+++||+||++-....
T Consensus 746 e~Ef~el~~~~~aVv~CRctPtQKA~v~~llq~~t~krvc~IGDGGNDVsMIq~A~~GiGI~gkEG-------------- 811 (1051)
T KOG0210|consen 746 EDEFIELVCELPAVVCCRCTPTQKAQVVRLLQKKTGKRVCAIGDGGNDVSMIQAADVGIGIVGKEG-------------- 811 (1051)
T ss_pred HHHHHHHHHhcCcEEEEecChhHHHHHHHHHHHhhCceEEEEcCCCccchheeecccceeeecccc--------------
Confidence 55666554 4579999999999999999998 58999999999999999999999999874211
Q ss_pred cchhhhhccccccchhhhhhhhccCCCCCCccchhhhhhhcccccccccchHHHHHHHHHHHHHHHHhhcCCCCCCCccc
Q 001010 847 ENTKSVKSKKSKSASEAASKAMSLNSEGTSKGKASARLEANSRTAGNRHLTAAEMQREKLKKMMEELNEEGDGRSAPIVK 926 (1191)
Q Consensus 847 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k 926 (1191)
T Consensus 812 -------------------------------------------------------------------------------- 811 (1051)
T KOG0210|consen 812 -------------------------------------------------------------------------------- 811 (1051)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cCcccccCCCccCcCCccchhhhhh-ccchHHHHHHhhhHHHH----HHHHHHHHHHHHhhhccccccchHHHHHhHHHH
Q 001010 927 LGDASMASPFTAKHASVAPTTDIIR-QGRSTLVTTLQMFKILG----LNCLATAYVLSVMYLDGVKLGDVQATISGVFTA 1001 (1191)
Q Consensus 927 lgdASiaaPFtsk~~~i~~v~~iir-~GR~~Lvtt~~~fk~l~----l~~li~~~s~svly~~g~~~~d~Q~~~~~~l~~ 1001 (1191)
..||.||.|+- ...+-|.+++- +||-+.-.|-..-++.. +-+.+||.-.++.|+..+. +++|+++.
T Consensus 812 -kQASLAADfSI--tqF~Hv~rLLl~HGR~SYkrsa~laqfViHRGL~Is~~Qavfs~v~yF~~V~------LyqG~Lmv 882 (1051)
T KOG0210|consen 812 -KQASLAADFSI--TQFSHVSRLLLWHGRNSYKRSAKLAQFVIHRGLIISTMQAVFSSVFYFAPVA------LYQGFLMV 882 (1051)
T ss_pred -cccchhccccH--HHHHHHHHHhhccccchHHHHHHHHHHHHhhhHHHHHHHHHHHHHhhhcchH------HhhhhHHH
Confidence 26899999985 34555666554 99987765544444321 2345577777888887664 34454432
Q ss_pred --------HHHHHhh--------ccCCCCccccCCCCCCccchhhHHHHHHHHHHHHHHHHH
Q 001010 1002 --------AFFLFIS--------HARPLPTLSAARPHPNIFCSYVFLSLMGQFAIHLFFLIS 1047 (1191)
Q Consensus 1002 --------~~~~~~s--------~~~p~~~Ls~~rP~~~if~~~~~~si~~Q~~i~~~~l~~ 1047 (1191)
++.+++- .+.-++.|.|+--..+.+|...|..+.+-.+++-..+.|
T Consensus 883 gysT~YTmlPVFSlv~d~Dv~~~~a~~yPELYKeL~kgr~lSYKtF~iwvLISiYQG~vim~ 944 (1051)
T KOG0210|consen 883 GYSTCYTMLPVFSLVLDRDVSESLAVLYPELYKELTKGRSLSYKTFFIWVLISIYQGSVIMY 944 (1051)
T ss_pred HHHHHHHHhhhheeeecccccHHHHhhhHHHHHHHhcCCccchhhhhhhhhHHHHcccHHHH
Confidence 1222221 223344555555556666766666665555555444444
|
|
| >TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-66 Score=633.27 Aligned_cols=452 Identities=35% Similarity=0.532 Sum_probs=382.2
Q ss_pred HHHHHHHHHhhccCCceEEEEECCEEEEEecCCCCCCcEEEEcCCCCCCCCCceeeeeEEEEecceeeecccccCCCCce
Q 001010 240 RLKTLTEIRRVRVDNQTIMVHRCGKWVKLAGTDLVPGDVVSIGRSSGQTGEDKSVPADMLILGGSAIVNEAILTGESTPQ 319 (1191)
Q Consensus 240 ~~r~~~~l~~m~~~~~~v~V~R~g~~~~I~s~eLvpGDIV~l~~g~gd~~~~~~VPaD~iLl~G~~~VdES~LTGES~Pv 319 (1191)
..+..+.++++...|..++|+|+| |++|++++|+|||+|.+++| +.|||||+|++|++.||||+|||||.|+
T Consensus 20 ~~~~~~~l~~~~~~~~~~~v~r~g-~~~V~~~~l~~GDiv~v~~G-------~~iP~Dg~vl~g~~~vdes~LTGEs~pv 91 (499)
T TIGR01494 20 AEDAIRSLKDLLVNPETVTVLRNG-WKEIPASDLVPGDIVLVKSG-------EIVPADGVLLSGSCFVDESNLTGESVPV 91 (499)
T ss_pred HHHHHHHHhhccCCCCeEEEEECC-eEEEEHHHCCCCCEEEECCC-------CEeeeeEEEEEccEEEEcccccCCCCCe
Confidence 334445555533468899999999 99999999999999999987 7999999999999999999999999999
Q ss_pred ecccccCCCCccccccccCCCeeEeeceEEeecCCCCCCCCCCCCCcEEEEEEEecccchhhHHHHHhccccccccc---
Q 001010 320 WKVSIMGRETGEKLSARRDKSHVLFGGTKILQHTPDKTFPLKTPDGGCLAVVLRTGFETSQGKLMRTILFSTERVTA--- 396 (1191)
Q Consensus 320 ~K~~i~~~~~~~~~~~~~~k~~~lfaGT~vlq~~~~~~~~~~~~~g~~~~vV~~TG~~T~~Gkl~r~i~~~~~~~~~--- 396 (1191)
.|.+ ++.+|+||.+. +|.....|+++|.+|..|++.+.+....+..++
T Consensus 92 ~k~~----------------g~~v~~gs~~~-------------~G~~~~~v~~~~~~s~~~~i~~~v~~~~~~k~~~~~ 142 (499)
T TIGR01494 92 LKTA----------------GDAVFAGTYVF-------------NGTLIVVVSATGPNTFGGKIAVVVYTGFETKTPLQP 142 (499)
T ss_pred eecc----------------CCccccCcEEe-------------ccEEEEEEEEeccccHHHHHHHHHHhcCCCCCchHH
Confidence 9986 66789999999 899999999999999999999887655543332
Q ss_pred -hhhhH-HHHHHHHHHHHHHhhheeeeecccCCCcchhHHHHHHHHhhhhccCCCcchHHHHHHHHHHHHHHhcCccccC
Q 001010 397 -NSWES-GLFILFLVVFAVIAAGYVLKKGMEDPTRSKYKLFLSCSLIITSVIPPELPMELSIAVNTSLIALARRGIFCTE 474 (1191)
Q Consensus 397 -~~~~~-~~fi~~lli~aii~~~~~~~~~~~~~~~~~~~~~l~~i~iit~~vP~~LP~~lslav~~s~~~L~k~~I~~~~ 474 (1191)
.++.. .+|+.++++++++.+.+|+..+.. ..++...+.+++.+++++|||+||++++++...+..+|+|+||++++
T Consensus 143 ~~~~~~~~~~~~~~~~la~~~~~~~~~~~~~--~~~~~~~~~~~~~vl~~~~P~aL~~~~~~~~~~~~~~~~~~gilvk~ 220 (499)
T TIGR01494 143 KLDRLSDIIFILFVLLIALAVFLFWAIGLWD--PNSIFKIFLRALILLVIAIPIALPLAVTIALAVGDARLAKKGIVVRS 220 (499)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc--cccHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHCCcEEec
Confidence 23334 566666666666666555433211 11356788999999999999999999999999999999999999999
Q ss_pred CCcccccCCccEEEecccccccCCceEEEEEeecCCCccccccCCCchHHHHHHhhccceEEeCCcccCChHHHHHHhcc
Q 001010 475 PFRIPFAGKVDMCCFDKTGTLTSDDMEFRGVVGLSNAELEDDMTKVPVRTQEILASCHALVFVDNKLVGDPLEKAALKGI 554 (1191)
Q Consensus 475 p~~i~~~G~vd~icfDKTGTLT~~~l~v~gv~~~~~~~~~~~~~~~~~~~~~~la~chsl~~~~~~~~GdPle~all~~~ 554 (1191)
+..+|.+|++|++|||||||||+|+|++.+++..+. ....+||+|+|++++.
T Consensus 221 ~~~lE~l~~v~~i~fDKTGTLT~~~~~v~~~~~~~~----------------------------~~~s~hp~~~ai~~~~ 272 (499)
T TIGR01494 221 LNALEELGKVDYICSDKTGTLTKNEMSFKKVSVLGG----------------------------EYLSGHPDERALVKSA 272 (499)
T ss_pred hhhhhhccCCcEEEeeCCCccccCceEEEEEEecCC----------------------------CcCCCChHHHHHHHHh
Confidence 999999999999999999999999999999874321 1236899999999987
Q ss_pred cccccCCCccccCCCCCCcccEEEEecCCCCCCcEEEEEEeCCeEEEEEeCcHHHHHHhccCChHHHHHHHHHHHHhcCe
Q 001010 555 DWSYKSDEKAMPKRGGGNAVQIVQRHHFASHLKRMSVVVRVQEEFFAFVKGAPETIQDRLTDLPSSYIETYKKYTHQGSR 634 (1191)
Q Consensus 555 ~~~~~~~~~~~~~~~~~~~~~il~~~~Fss~~krmsvvv~~~~~~~~~~KGapE~I~~~~~~~p~~~~~~~~~~a~~G~R 634 (1191)
.|. .++.+||++..++|+++++.+++ .++||+||.+.+.|.. +.+..+.++++|+|
T Consensus 273 ~~~------------------~~~~~~f~~~~~~~~~~~~~~~~--~~~~G~~~~i~~~~~~----~~~~~~~~~~~g~~ 328 (499)
T TIGR01494 273 KWK------------------ILNVFEFSSVRKRMSVIVRGPDG--TYVKGAPEFVLSRVKD----LEEKVKELAQSGLR 328 (499)
T ss_pred hhc------------------CcceeccCCCCceEEEEEecCCc--EEEeCCHHHHHHhhHH----HHHHHHHHHhCCCE
Confidence 541 12467999999999999987444 4789999999998853 44556678899999
Q ss_pred eeeEEEEeCCCCChhhhhhccccccccCeEEeeeecccCcCCchhHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCC
Q 001010 635 VLALAFKSLPDMTVSDARSLHRDEVENGLTFAGFAVFNCPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIV 714 (1191)
Q Consensus 635 VLalA~k~l~~~~~~~~~~~~r~~~E~dL~flG~l~~~d~lK~da~~~I~~L~~agi~vvMiTGDn~~TA~~VA~~~gI~ 714 (1191)
++++|++. +++|++.++|++|+|++++|+.|+++|++++|+|||++.||.++|+++||
T Consensus 329 ~~~~a~~~---------------------~~~g~i~l~d~lr~~~~~~i~~l~~~gi~~~~ltGD~~~~a~~ia~~lgi- 386 (499)
T TIGR01494 329 VLAVASKE---------------------TLLGLLGLEDPLRDDAKETISELREAGIRVIMLTGDNVLTAKAIAKELGI- 386 (499)
T ss_pred EEEEEECC---------------------eEEEEEEecCCCchhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCc-
Confidence 99999742 69999999999999999999999999999999999999999999999985
Q ss_pred CCCcEEEeecCCCceeeecCCCccccccCChHHHhcccccceEEEechhhhhhcchHHHHhhcCcceEEeecChhhHHHH
Q 001010 715 TKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLTDAHDLCIGGDCFEMLQQTSAVLRVIPYVKVFARVAPEQKELI 794 (1191)
Q Consensus 715 ~~~~~il~~~~~~~~~~w~~~d~~~~~~~~~~~~~~~~~~~~l~itG~~l~~l~~~~~~~~~l~~~~VfAR~sP~qK~~i 794 (1191)
+||++|+||.++
T Consensus 387 --------------------------------------------------------------------~~~~~p~~K~~~ 398 (499)
T TIGR01494 387 --------------------------------------------------------------------FARVTPEEKAAL 398 (499)
T ss_pred --------------------------------------------------------------------eeccCHHHHHHH
Confidence 478999999999
Q ss_pred HHHHhHcCCEEEEEcCCccCHHHHhhCCceEEeccCCCccccccCCcccccccchhhhhccccccchhhhhhhhccCCCC
Q 001010 795 LTTFKAVGRMTLMCGDGTNDVGALKQAHVGVALLNAVPPTQSGNSSSEASKDENTKSVKSKKSKSASEAASKAMSLNSEG 874 (1191)
Q Consensus 795 V~~Lq~~g~~V~m~GDG~ND~~ALk~AdVGIAl~~~~~e~~~~asdi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 874 (1191)
|+.+|+.|+.|+|+|||+||++||++|||||||+ +++++|+++++
T Consensus 399 v~~l~~~g~~v~~vGDg~nD~~al~~Advgia~~------a~~~adivl~~----------------------------- 443 (499)
T TIGR01494 399 VEALQKKGRVVAMTGDGVNDAPALKKADVGIAMG------AKAAADIVLLD----------------------------- 443 (499)
T ss_pred HHHHHHCCCEEEEECCChhhHHHHHhCCCccccc------hHHhCCeEEec-----------------------------
Confidence 9999999999999999999999999999999997 35556666543
Q ss_pred CCccchhhhhhhcccccccccchHHHHHHHHHHHHHHHHhhcCCCCCCCccccCcccccCCCccCcCCccchhhhhhccc
Q 001010 875 TSKGKASARLEANSRTAGNRHLTAAEMQREKLKKMMEELNEEGDGRSAPIVKLGDASMASPFTAKHASVAPTTDIIRQGR 954 (1191)
Q Consensus 875 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~klgdASiaaPFtsk~~~i~~v~~iir~GR 954 (1191)
.++..+..+++.||
T Consensus 444 ------------------------------------------------------------------~~l~~i~~~~~~~r 457 (499)
T TIGR01494 444 ------------------------------------------------------------------DNLSTIVDALKEGR 457 (499)
T ss_pred ------------------------------------------------------------------CCHHHHHHHHHHHH
Confidence 35778899999999
Q ss_pred hHHHHHHhhhHHHHHHHHH
Q 001010 955 STLVTTLQMFKILGLNCLA 973 (1191)
Q Consensus 955 ~~Lvtt~~~fk~l~l~~li 973 (1191)
++..+..|.+.+...|.++
T Consensus 458 ~~~~~i~~~~~~~~~~n~~ 476 (499)
T TIGR01494 458 KTFSTIKSNIFWAIAYNLI 476 (499)
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 9999999999987777665
|
The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily. |
| >PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-64 Score=632.10 Aligned_cols=455 Identities=22% Similarity=0.249 Sum_probs=365.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc-CCceEEEEECCEEEEEecCCCCCCcEEEEcCCCCCCCCCceeeeeEEE
Q 001010 222 SLFTLFMLFMFESTMAKSRLKTLTEIRRVRV-DNQTIMVHRCGKWVKLAGTDLVPGDVVSIGRSSGQTGEDKSVPADMLI 300 (1191)
Q Consensus 222 sl~~l~m~vv~~~~~~~~~~r~~~~l~~m~~-~~~~v~V~R~g~~~~I~s~eLvpGDIV~l~~g~gd~~~~~~VPaD~iL 300 (1191)
+.++++++.+.+....+++.|+.+.++++.. .|..++|+|||++++|++++|+|||+|.|++| ++|||||+|
T Consensus 209 a~~i~~l~~~g~~le~~~~~ra~~~~~~L~~l~p~~a~vir~g~~~~v~~~~l~~GDiv~v~~G-------~~IP~Dg~v 281 (741)
T PRK11033 209 AAMVLLLFLIGERLEGYAASRARRGVSALMALVPETATRLRDGEREEVAIADLRPGDVIEVAAG-------GRLPADGKL 281 (741)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEEECCEEEEEEHHHCCCCCEEEECCC-------CEEecceEE
Confidence 3344444444455556666666666666544 58899999999999999999999999999987 899999999
Q ss_pred EecceeeecccccCCCCceecccccCCCCccccccccCCCeeEeeceEEeecCCCCCCCCCCCCCcEEEEEEEecccchh
Q 001010 301 LGGSAIVNEAILTGESTPQWKVSIMGRETGEKLSARRDKSHVLFGGTKILQHTPDKTFPLKTPDGGCLAVVLRTGFETSQ 380 (1191)
Q Consensus 301 l~G~~~VdES~LTGES~Pv~K~~i~~~~~~~~~~~~~~k~~~lfaGT~vlq~~~~~~~~~~~~~g~~~~vV~~TG~~T~~ 380 (1191)
++|++.||||+|||||.|+.|.+ ++.+|+||.++ +|.+.+.|+++|.+|..
T Consensus 282 i~g~~~vdes~lTGEs~Pv~k~~----------------Gd~V~aGt~~~-------------~G~~~i~V~~~g~~s~l 332 (741)
T PRK11033 282 LSPFASFDESALTGESIPVERAT----------------GEKVPAGATSV-------------DRLVTLEVLSEPGASAI 332 (741)
T ss_pred EECcEEeecccccCCCCCEecCC----------------CCeeccCCEEc-------------CceEEEEEEeccccCHH
Confidence 99999999999999999999975 78899999999 89999999999999999
Q ss_pred hHHHHHhccccccccchh----hhHHHHHHHHHHHHHHhhheeeeecccCCCcchhHHHHHHHHhhhhccCCCcchHHHH
Q 001010 381 GKLMRTILFSTERVTANS----WESGLFILFLVVFAVIAAGYVLKKGMEDPTRSKYKLFLSCSLIITSVIPPELPMELSI 456 (1191)
Q Consensus 381 Gkl~r~i~~~~~~~~~~~----~~~~~fi~~lli~aii~~~~~~~~~~~~~~~~~~~~~l~~i~iit~~vP~~LP~~lsl 456 (1191)
|++++.+....++..+.+ +.+.+|+.++++++++.+.+|+... +.++...+..++.+++++|||+|.++.++
T Consensus 333 ~~I~~lv~~a~~~k~~~q~~~d~~a~~~~~~v~~~a~~~~~~~~~~~----~~~~~~~i~~a~svlviacPcaL~latP~ 408 (741)
T PRK11033 333 DRILHLIEEAEERRAPIERFIDRFSRIYTPAIMLVALLVILVPPLLF----AAPWQEWIYRGLTLLLIGCPCALVISTPA 408 (741)
T ss_pred HHHHHHHHHhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc----cCCHHHHHHHHHHHHHHhchhhhhhhhHH
Confidence 999999887766666543 4456677777777776655442211 12345567888999999999999999999
Q ss_pred HHHHHHHHHHhcCccccCCCcccccCCccEEEecccccccCCceEEEEEeecCCCccccccCCCchHHHHHHhhccceEE
Q 001010 457 AVNTSLIALARRGIFCTEPFRIPFAGKVDMCCFDKTGTLTSDDMEFRGVVGLSNAELEDDMTKVPVRTQEILASCHALVF 536 (1191)
Q Consensus 457 av~~s~~~L~k~~I~~~~p~~i~~~G~vd~icfDKTGTLT~~~l~v~gv~~~~~~~~~~~~~~~~~~~~~~la~chsl~~ 536 (1191)
++..++.+++|+||+++++..+|.++++|++|||||||||+|+|+|..+...++. ..+ .++..+.+++
T Consensus 409 a~~~~l~~aar~gilik~~~alE~l~~v~~v~fDKTGTLT~g~~~v~~~~~~~~~---------~~~--~~l~~aa~~e- 476 (741)
T PRK11033 409 AITSGLAAAARRGALIKGGAALEQLGRVTTVAFDKTGTLTEGKPQVTDIHPATGI---------SES--ELLALAAAVE- 476 (741)
T ss_pred HHHHHHHHHHHCCeEEcCcHHHHHhhCCCEEEEeCCCCCcCCceEEEEEEecCCC---------CHH--HHHHHHHHHh-
Confidence 9999999999999999999999999999999999999999999999998764431 111 2233333332
Q ss_pred eCCcccCChHHHHHHhcccccccCCCccccCCCCCCcccEEEEecCCCCCCcE---EEEEEeCCeEEEEEeCcHHHHHHh
Q 001010 537 VDNKLVGDPLEKAALKGIDWSYKSDEKAMPKRGGGNAVQIVQRHHFASHLKRM---SVVVRVQEEFFAFVKGAPETIQDR 613 (1191)
Q Consensus 537 ~~~~~~GdPle~all~~~~~~~~~~~~~~~~~~~~~~~~il~~~~Fss~~krm---svvv~~~~~~~~~~KGapE~I~~~ 613 (1191)
....||+++|++++..-. + + .+||.++.+.+ ++....+++. +..|+|+.+.+
T Consensus 477 ---~~s~hPia~Ai~~~a~~~-----------~----~----~~~~~~~~~~~~g~Gv~~~~~g~~--~~ig~~~~~~~- 531 (741)
T PRK11033 477 ---QGSTHPLAQAIVREAQVR-----------G----L----AIPEAESQRALAGSGIEGQVNGER--VLICAPGKLPP- 531 (741)
T ss_pred ---cCCCCHHHHHHHHHHHhc-----------C----C----CCCCCcceEEEeeEEEEEEECCEE--EEEecchhhhh-
Confidence 225799999999865310 0 0 13555555554 3445556653 44689998865
Q ss_pred ccCChHHHHHHHHHHHHhcCeeeeEEEEeCCCCChhhhhhccccccccCeEEeeeecccCcCCchhHHHHHHHHhcCCcE
Q 001010 614 LTDLPSSYIETYKKYTHQGSRVLALAFKSLPDMTVSDARSLHRDEVENGLTFAGFAVFNCPIREDSAKILSELKNSSQDL 693 (1191)
Q Consensus 614 ~~~~p~~~~~~~~~~a~~G~RVLalA~k~l~~~~~~~~~~~~r~~~E~dL~flG~l~~~d~lK~da~~~I~~L~~agi~v 693 (1191)
+.+++.+..+.+..+|+|++++++ |.+++|++.++|++|||++++|++|++.|+++
T Consensus 532 ---~~~~~~~~~~~~~~~g~~~v~va~---------------------~~~~~g~i~l~d~~r~~a~~~i~~L~~~gi~~ 587 (741)
T PRK11033 532 ---LADAFAGQINELESAGKTVVLVLR---------------------NDDVLGLIALQDTLRADARQAISELKALGIKG 587 (741)
T ss_pred ---ccHHHHHHHHHHHhCCCEEEEEEE---------------------CCEEEEEEEEecCCchhHHHHHHHHHHCCCEE
Confidence 345666777889999999999996 56899999999999999999999999999999
Q ss_pred EEEcCCCHHHHHHHHHHcCCCCCCcEEEeecCCCceeeecCCCccccccCChHHHhcccccceEEEechhhhhhcchHHH
Q 001010 694 AMITGDQALTACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLTDAHDLCIGGDCFEMLQQTSAV 773 (1191)
Q Consensus 694 vMiTGDn~~TA~~VA~~~gI~~~~~~il~~~~~~~~~~w~~~d~~~~~~~~~~~~~~~~~~~~l~itG~~l~~l~~~~~~ 773 (1191)
+|+||||..+|.++|+++||.
T Consensus 588 ~llTGd~~~~a~~ia~~lgi~----------------------------------------------------------- 608 (741)
T PRK11033 588 VMLTGDNPRAAAAIAGELGID----------------------------------------------------------- 608 (741)
T ss_pred EEEcCCCHHHHHHHHHHcCCC-----------------------------------------------------------
Confidence 999999999999999999993
Q ss_pred HhhcCcceEEeecChhhHHHHHHHHhHcCCEEEEEcCCccCHHHHhhCCceEEeccCCCccccccCCcccccc
Q 001010 774 LRVIPYVKVFARVAPEQKELILTTFKAVGRMTLMCGDGTNDVGALKQAHVGVALLNAVPPTQSGNSSSEASKD 846 (1191)
Q Consensus 774 ~~~l~~~~VfAR~sP~qK~~iV~~Lq~~g~~V~m~GDG~ND~~ALk~AdVGIAl~~~~~e~~~~asdi~~~~~ 846 (1191)
+++++.|+||..+|+.||+. +.|+|+|||.||++||++|||||||++ +++.+++++|+++.++
T Consensus 609 --------~~~~~~p~~K~~~v~~l~~~-~~v~mvGDgiNDapAl~~A~vgia~g~-~~~~a~~~adivl~~~ 671 (741)
T PRK11033 609 --------FRAGLLPEDKVKAVTELNQH-APLAMVGDGINDAPAMKAASIGIAMGS-GTDVALETADAALTHN 671 (741)
T ss_pred --------eecCCCHHHHHHHHHHHhcC-CCEEEEECCHHhHHHHHhCCeeEEecC-CCHHHHHhCCEEEecC
Confidence 46778999999999999965 589999999999999999999999995 4556666667666444
|
|
| >TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-62 Score=605.30 Aligned_cols=501 Identities=21% Similarity=0.250 Sum_probs=396.6
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc-CCceEEEEECC-EEEEEecCCCCCCcEEEEcCCCCCCCCCcee
Q 001010 217 EYWYYSLFTLFMLFMFESTMAKSRLKTLTEIRRVRV-DNQTIMVHRCG-KWVKLAGTDLVPGDVVSIGRSSGQTGEDKSV 294 (1191)
Q Consensus 217 ~y~~ysl~~l~m~vv~~~~~~~~~~r~~~~l~~m~~-~~~~v~V~R~g-~~~~I~s~eLvpGDIV~l~~g~gd~~~~~~V 294 (1191)
..|..+..+++++++......++++|+.+.++++.. .|..++|+|+| ++++|++++|+|||+|.+++| +.|
T Consensus 16 ~~~~~~~~i~~~~~~~~~i~~~~~~~~~~~l~~l~~~~~~~~~v~r~~g~~~~i~~~~l~~GDiv~v~~G-------~~i 88 (556)
T TIGR01525 16 GLVLEGALLLFLFLLGETLEERAKGRASDALSALLALAPSTARVLQGDGSEEEVPVEELQVGDIVIVRPG-------ERI 88 (556)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEECCCeEEEEEHHHCCCCCEEEECCC-------CEe
Confidence 344556666666667677777888888888888765 57889999996 999999999999999999987 899
Q ss_pred eeeEEEEecceeeecccccCCCCceecccccCCCCccccccccCCCeeEeeceEEeecCCCCCCCCCCCCCcEEEEEEEe
Q 001010 295 PADMLILGGSAIVNEAILTGESTPQWKVSIMGRETGEKLSARRDKSHVLFGGTKILQHTPDKTFPLKTPDGGCLAVVLRT 374 (1191)
Q Consensus 295 PaD~iLl~G~~~VdES~LTGES~Pv~K~~i~~~~~~~~~~~~~~k~~~lfaGT~vlq~~~~~~~~~~~~~g~~~~vV~~T 374 (1191)
||||+|++|++.||||+|||||.|+.|.+ ++.+|+||.+. +|.++++|++|
T Consensus 89 P~Dg~vi~g~~~vdes~lTGEs~pv~k~~----------------g~~v~aGt~v~-------------~g~~~~~v~~~ 139 (556)
T TIGR01525 89 PVDGVVISGESEVDESALTGESMPVEKKE----------------GDEVFAGTING-------------DGSLTIRVTKL 139 (556)
T ss_pred ccceEEEecceEEeehhccCCCCCEecCC----------------cCEEeeceEEC-------------CceEEEEEEEe
Confidence 99999999999999999999999999975 78899999998 89999999999
Q ss_pred cccchhhHHHHHhccccccccchhh----hHHHHHHHHHHHHHHhhheeeeecccCCCcchhHHHHHHHHhhhhccCCCc
Q 001010 375 GFETSQGKLMRTILFSTERVTANSW----ESGLFILFLVVFAVIAAGYVLKKGMEDPTRSKYKLFLSCSLIITSVIPPEL 450 (1191)
Q Consensus 375 G~~T~~Gkl~r~i~~~~~~~~~~~~----~~~~fi~~lli~aii~~~~~~~~~~~~~~~~~~~~~l~~i~iit~~vP~~L 450 (1191)
|.+|..|++.+.+....++.++.++ .+.+|+.+.++++++++.+++..+. . ..+..++.+++++|||+|
T Consensus 140 g~~t~~~~i~~~~~~~~~~~~~~~~~~~~~a~~~~~~~l~~a~~~~~~~~~~~~-----~--~~~~~~~~vlv~~~P~al 212 (556)
T TIGR01525 140 GEDSTLAQIVKLVEEAQSSKAPIQRLADRIASYYVPAVLAIALLTFVVWLALGA-----L--GALYRALAVLVVACPCAL 212 (556)
T ss_pred cccCHHHHHHHHHHHHhhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-----c--hHHHHHHHHHhhccccch
Confidence 9999999999998776655555433 4456666666777766665544331 1 567889999999999999
Q ss_pred chHHHHHHHHHHHHHHhcCccccCCCcccccCCccEEEecccccccCCceEEEEEeecCCCccccccCCCchHHHHHHhh
Q 001010 451 PMELSIAVNTSLIALARRGIFCTEPFRIPFAGKVDMCCFDKTGTLTSDDMEFRGVVGLSNAELEDDMTKVPVRTQEILAS 530 (1191)
Q Consensus 451 P~~lslav~~s~~~L~k~~I~~~~p~~i~~~G~vd~icfDKTGTLT~~~l~v~gv~~~~~~~~~~~~~~~~~~~~~~la~ 530 (1191)
|+++++++..++.+|+|+||+++++..+|.+|++|++|||||||||+|+|++.++...++.. .. ...++..
T Consensus 213 ~l~~~~~~~~~~~~~~~~gilvk~~~~le~l~~v~~i~fDKTGTLT~~~~~v~~~~~~~~~~-------~~--~~~~l~~ 283 (556)
T TIGR01525 213 GLATPVAILVAIGVAARRGILIKGGDALEKLAKVKTVVFDKTGTLTTGKPTVVDVEPLDDAS-------IS--EEELLAL 283 (556)
T ss_pred hehhHHHHHHHHHHHHHCCceecCchHHHHhhcCCEEEEeCCCCCcCCceEEEEEEecCCCC-------cc--HHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999987654311 00 1223444
Q ss_pred ccceEEeCCcccCChHHHHHHhcccccccCCCccccCCCCCCcccEEEEecCCCCCCcEEEEEEeCCeEEEEEeCcHHHH
Q 001010 531 CHALVFVDNKLVGDPLEKAALKGIDWSYKSDEKAMPKRGGGNAVQIVQRHHFASHLKRMSVVVRVQEEFFAFVKGAPETI 610 (1191)
Q Consensus 531 chsl~~~~~~~~GdPle~all~~~~~~~~~~~~~~~~~~~~~~~~il~~~~Fss~~krmsvvv~~~~~~~~~~KGapE~I 610 (1191)
|.++.. ...||+++|+++++.-. ..+.. . . ++ .+.+ ...++.+..++. ..+..|+++.+
T Consensus 284 a~~~e~----~~~hp~~~Ai~~~~~~~-~~~~~---~----~-~~-~~~~------~~~gi~~~~~g~-~~~~lg~~~~~ 342 (556)
T TIGR01525 284 AAALEQ----SSSHPLARAIVRYAKKR-GLELP---K----Q-ED-VEEV------PGKGVEATVDGQ-EEVRIGNPRLL 342 (556)
T ss_pred HHHHhc----cCCChHHHHHHHHHHhc-CCCcc---c----c-cC-eeEe------cCCeEEEEECCe-eEEEEecHHHH
Confidence 444432 25799999999876411 00000 0 0 00 0111 112344444441 25667999987
Q ss_pred HHhccCChHHHHHHHHHHHHhcCeeeeEEEEeCCCCChhhhhhccccccccCeEEeeeecccCcCCchhHHHHHHHHhcC
Q 001010 611 QDRLTDLPSSYIETYKKYTHQGSRVLALAFKSLPDMTVSDARSLHRDEVENGLTFAGFAVFNCPIREDSAKILSELKNSS 690 (1191)
Q Consensus 611 ~~~~~~~p~~~~~~~~~~a~~G~RVLalA~k~l~~~~~~~~~~~~r~~~E~dL~flG~l~~~d~lK~da~~~I~~L~~ag 690 (1191)
...-...+ .+.+..+.++++|+|++.++. |.+++|.+.++|++||+++++|++|++.|
T Consensus 343 ~~~~~~~~-~~~~~~~~~~~~g~~~~~v~~---------------------~~~~~g~i~~~d~~~~g~~e~l~~L~~~g 400 (556)
T TIGR01525 343 ELAAEPIS-ASPDLLNEGESQGKTVVFVAV---------------------DGELLGVIALRDQLRPEAKEAIAALKRAG 400 (556)
T ss_pred hhcCCCch-hhHHHHHHHhhCCcEEEEEEE---------------------CCEEEEEEEecccchHhHHHHHHHHHHcC
Confidence 22112222 334556778899999999984 56899999999999999999999999999
Q ss_pred -CcEEEEcCCCHHHHHHHHHHcCCCCCCcEEEeecCCCceeeecCCCccccccCChHHHhcccccceEEEechhhhhhcc
Q 001010 691 -QDLAMITGDQALTACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLTDAHDLCIGGDCFEMLQQ 769 (1191)
Q Consensus 691 -i~vvMiTGDn~~TA~~VA~~~gI~~~~~~il~~~~~~~~~~w~~~d~~~~~~~~~~~~~~~~~~~~l~itG~~l~~l~~ 769 (1191)
+++.|+|||+..+|.++++++||.
T Consensus 401 ~i~v~ivTgd~~~~a~~i~~~lgi~------------------------------------------------------- 425 (556)
T TIGR01525 401 GIKLVMLTGDNRSAAEAVAAELGID------------------------------------------------------- 425 (556)
T ss_pred CCeEEEEeCCCHHHHHHHHHHhCCC-------------------------------------------------------
Confidence 999999999999999999999993
Q ss_pred hHHHHhhcCcceEEeecChhhHHHHHHHHhHcCCEEEEEcCCccCHHHHhhCCceEEeccCCCccccccCCcccccccch
Q 001010 770 TSAVLRVIPYVKVFARVAPEQKELILTTFKAVGRMTLMCGDGTNDVGALKQAHVGVALLNAVPPTQSGNSSSEASKDENT 849 (1191)
Q Consensus 770 ~~~~~~~l~~~~VfAR~sP~qK~~iV~~Lq~~g~~V~m~GDG~ND~~ALk~AdVGIAl~~~~~e~~~~asdi~~~~~~~~ 849 (1191)
.+|+++.|++|..+++.+++.|+.|+|+|||.||++|+++|||||++++ +++..++.+|+++
T Consensus 426 -----------~~f~~~~p~~K~~~v~~l~~~~~~v~~vGDg~nD~~al~~A~vgia~g~-~~~~~~~~Ad~vi------ 487 (556)
T TIGR01525 426 -----------EVHAELLPEDKLAIVKELQEEGGVVAMVGDGINDAPALAAADVGIAMGA-GSDVAIEAADIVL------ 487 (556)
T ss_pred -----------eeeccCCHHHHHHHHHHHHHcCCEEEEEECChhHHHHHhhCCEeEEeCC-CCHHHHHhCCEEE------
Confidence 3889999999999999999999999999999999999999999999994 4444444444443
Q ss_pred hhhhccccccchhhhhhhhccCCCCCCccchhhhhhhcccccccccchHHHHHHHHHHHHHHHHhhcCCCCCCCccccCc
Q 001010 850 KSVKSKKSKSASEAASKAMSLNSEGTSKGKASARLEANSRTAGNRHLTAAEMQREKLKKMMEELNEEGDGRSAPIVKLGD 929 (1191)
Q Consensus 850 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~klgd 929 (1191)
T Consensus 488 -------------------------------------------------------------------------------- 487 (556)
T TIGR01525 488 -------------------------------------------------------------------------------- 487 (556)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccccCCCccCcCCccchhhhhhccchHHHHHHhhhHHHHHHHHHH
Q 001010 930 ASMASPFTAKHASVAPTTDIIRQGRSTLVTTLQMFKILGLNCLAT 974 (1191)
Q Consensus 930 ASiaaPFtsk~~~i~~v~~iir~GR~~Lvtt~~~fk~l~l~~li~ 974 (1191)
...+++.+.++++.||.+..+..+.+.+...|.++.
T Consensus 488 ---------~~~~~~~l~~~i~~~r~~~~~i~~nl~~a~~~N~~~ 523 (556)
T TIGR01525 488 ---------LNDDLSSLPTAIDLSRKTRRIIKQNLAWALGYNLVA 523 (556)
T ss_pred ---------eCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 234677889999999999999999999977776654
|
This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512. |
| >TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.2e-62 Score=595.22 Aligned_cols=456 Identities=24% Similarity=0.278 Sum_probs=360.1
Q ss_pred HHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc-CCceEEEEECCEEEEEecCCCCCCcEEEEcC
Q 001010 205 FQVFCVGLWCLDEYWYYSLFTLFMLFMFESTMAKSRLKTLTEIRRVRV-DNQTIMVHRCGKWVKLAGTDLVPGDVVSIGR 283 (1191)
Q Consensus 205 fqi~~v~lw~l~~y~~ysl~~l~m~vv~~~~~~~~~~r~~~~l~~m~~-~~~~v~V~R~g~~~~I~s~eLvpGDIV~l~~ 283 (1191)
+.+.+++.|.+.+|+ .+.++++++++......++++|+.+.++++.. .|..++|+|||+++++++++|+|||+|.+++
T Consensus 5 ~~~a~~~~~~~~~~~-~~~~i~~~~~~~~~l~~~~~~~a~~~l~~l~~~~~~~~~v~r~g~~~~i~~~~l~~GDiv~v~~ 83 (536)
T TIGR01512 5 MALAALGAVAIGEYL-EGALLLLLFSIGETLEEYASGRARRALKALMELAPDTARVLRGGSLEEVAVEELKVGDVVVVKP 83 (536)
T ss_pred HHHHHHHHHHHhhHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEECCEEEEEEHHHCCCCCEEEEcC
Confidence 344455566666654 45555566666666667788888888877765 6889999999999999999999999999998
Q ss_pred CCCCCCCCceeeeeEEEEecceeeecccccCCCCceecccccCCCCccccccccCCCeeEeeceEEeecCCCCCCCCCCC
Q 001010 284 SSGQTGEDKSVPADMLILGGSAIVNEAILTGESTPQWKVSIMGRETGEKLSARRDKSHVLFGGTKILQHTPDKTFPLKTP 363 (1191)
Q Consensus 284 g~gd~~~~~~VPaD~iLl~G~~~VdES~LTGES~Pv~K~~i~~~~~~~~~~~~~~k~~~lfaGT~vlq~~~~~~~~~~~~ 363 (1191)
| ++|||||++++|++.||||+|||||.|+.|.+ ++.+|+||.++
T Consensus 84 G-------~~iP~Dg~ii~g~~~vdes~lTGEs~pv~k~~----------------g~~v~aGt~v~------------- 127 (536)
T TIGR01512 84 G-------ERVPVDGVVLSGTSTVDESALTGESVPVEKAP----------------GDEVFAGAINL------------- 127 (536)
T ss_pred C-------CEeecceEEEeCcEEEEecccCCCCCcEEeCC----------------CCEEEeeeEEC-------------
Confidence 7 89999999999999999999999999999975 77899999999
Q ss_pred CCcEEEEEEEecccchhhHHHHHhccccccccchhh----hHHHHHHHHHHHHHHhhheeeeecccCCCcchhHHHHHHH
Q 001010 364 DGGCLAVVLRTGFETSQGKLMRTILFSTERVTANSW----ESGLFILFLVVFAVIAAGYVLKKGMEDPTRSKYKLFLSCS 439 (1191)
Q Consensus 364 ~g~~~~vV~~TG~~T~~Gkl~r~i~~~~~~~~~~~~----~~~~fi~~lli~aii~~~~~~~~~~~~~~~~~~~~~l~~i 439 (1191)
+|.+.++|++||.+|..|++.+.+..+....++.++ .+.+|++++++++++.+.+++..+ . ....+..++
T Consensus 128 ~G~~~~~V~~~g~~t~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~-~~~~~~~~~ 201 (536)
T TIGR01512 128 DGVLTIVVTKLPADSTIAKIVNLVEEAQSRKAKTQRFIDRFARYYTPVVLAIALAIWLVPGLLK-----R-WPFWVYRAL 201 (536)
T ss_pred CceEEEEEEEeccccHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-----c-cHHHHHHHH
Confidence 899999999999999999999988776655555443 345566666666665555444322 1 112677889
Q ss_pred HhhhhccCCCcchHHHHHHHHHHHHHHhcCccccCCCcccccCCccEEEecccccccCCceEEEEEeecCCCccccccCC
Q 001010 440 LIITSVIPPELPMELSIAVNTSLIALARRGIFCTEPFRIPFAGKVDMCCFDKTGTLTSDDMEFRGVVGLSNAELEDDMTK 519 (1191)
Q Consensus 440 ~iit~~vP~~LP~~lslav~~s~~~L~k~~I~~~~p~~i~~~G~vd~icfDKTGTLT~~~l~v~gv~~~~~~~~~~~~~~ 519 (1191)
.+++++|||+||+++++++..++.+++|+||+++++.++|.+|++|++|||||||||+|+|++.++.+.
T Consensus 202 svlv~~~P~aL~la~~~~~~~~~~~~~k~gilik~~~~le~l~~v~~i~fDKTGTLT~~~~~v~~~~~~----------- 270 (536)
T TIGR01512 202 VLLVVASPCALVISAPAAYLSAISAAARHGILIKGGAALEALAKIKTVAFDKTGTLTTGRPKVVDVVPA----------- 270 (536)
T ss_pred HHHhhcCccccccchHHHHHHHHHHHHHCCeEEcCcHHHHhhcCCCEEEECCCCCCcCCceEEEEeeHH-----------
Confidence 999999999999999999999999999999999999999999999999999999999999999988631
Q ss_pred CchHHHHHHhhccceEEeCCcccCChHHHHHHhcccccccCCCccccCCCCCCcccEEEEecCCCCCCcEEEEEEeCCeE
Q 001010 520 VPVRTQEILASCHALVFVDNKLVGDPLEKAALKGIDWSYKSDEKAMPKRGGGNAVQIVQRHHFASHLKRMSVVVRVQEEF 599 (1191)
Q Consensus 520 ~~~~~~~~la~chsl~~~~~~~~GdPle~all~~~~~~~~~~~~~~~~~~~~~~~~il~~~~Fss~~krmsvvv~~~~~~ 599 (1191)
.++..+.++. ....||+++|++++..-. + .+.-.+.++ ..++....+++.
T Consensus 271 ------~~l~~a~~~e----~~~~hp~~~Ai~~~~~~~----~----------~~~~~~~~~------g~gi~~~~~g~~ 320 (536)
T TIGR01512 271 ------EVLRLAAAAE----QASSHPLARAIVDYARKR----E----------NVESVEEVP------GEGVRAVVDGGE 320 (536)
T ss_pred ------HHHHHHHHHh----ccCCCcHHHHHHHHHHhc----C----------CCcceEEec------CCeEEEEECCeE
Confidence 1222233333 224789999999865311 0 011111111 123444445542
Q ss_pred EEEEeCcHHHHHHhccCChHHHHHHHHHHHHhcCeeeeEEEEeCCCCChhhhhhccccccccCeEEeeeecccCcCCchh
Q 001010 600 FAFVKGAPETIQDRLTDLPSSYIETYKKYTHQGSRVLALAFKSLPDMTVSDARSLHRDEVENGLTFAGFAVFNCPIREDS 679 (1191)
Q Consensus 600 ~~~~KGapE~I~~~~~~~p~~~~~~~~~~a~~G~RVLalA~k~l~~~~~~~~~~~~r~~~E~dL~flG~l~~~d~lK~da 679 (1191)
+..|+++.+.+... ..+..+|.+++.++ .|..++|.+.++|++||++
T Consensus 321 --~~ig~~~~~~~~~~----------~~~~~~~~~~~~v~---------------------~~~~~~g~i~~~d~l~~~~ 367 (536)
T TIGR01512 321 --VRIGNPRSLEAAVG----------ARPESAGKTIVHVA---------------------RDGTYLGYILLSDEPRPDA 367 (536)
T ss_pred --EEEcCHHHHhhcCC----------cchhhCCCeEEEEE---------------------ECCEEEEEEEEeccchHHH
Confidence 44699887654321 14566788876665 3678999999999999999
Q ss_pred HHHHHHHHhcCC-cEEEEcCCCHHHHHHHHHHcCCCCCCcEEEeecCCCceeeecCCCccccccCChHHHhcccccceEE
Q 001010 680 AKILSELKNSSQ-DLAMITGDQALTACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLTDAHDLC 758 (1191)
Q Consensus 680 ~~~I~~L~~agi-~vvMiTGDn~~TA~~VA~~~gI~~~~~~il~~~~~~~~~~w~~~d~~~~~~~~~~~~~~~~~~~~l~ 758 (1191)
+++|++|+++|+ ++.|+|||+..+|..+++++||.
T Consensus 368 ~e~i~~L~~~Gi~~v~vvTgd~~~~a~~i~~~lgi~-------------------------------------------- 403 (536)
T TIGR01512 368 AEAIAELKALGIEKVVMLTGDRRAVAERVARELGID-------------------------------------------- 403 (536)
T ss_pred HHHHHHHHHcCCCcEEEEcCCCHHHHHHHHHHcCCh--------------------------------------------
Confidence 999999999999 99999999999999999999993
Q ss_pred EechhhhhhcchHHHHhhcCcceEEeecChhhHHHHHHHHhHcCCEEEEEcCCccCHHHHhhCCceEEeccCCCcccccc
Q 001010 759 IGGDCFEMLQQTSAVLRVIPYVKVFARVAPEQKELILTTFKAVGRMTLMCGDGTNDVGALKQAHVGVALLNAVPPTQSGN 838 (1191)
Q Consensus 759 itG~~l~~l~~~~~~~~~l~~~~VfAR~sP~qK~~iV~~Lq~~g~~V~m~GDG~ND~~ALk~AdVGIAl~~~~~e~~~~a 838 (1191)
.+|+++.|++|..+++.+++.++.|+|+|||.||++|+++||+||+++..+++..+++
T Consensus 404 ----------------------~~f~~~~p~~K~~~i~~l~~~~~~v~~vGDg~nD~~al~~A~vgia~g~~~~~~~~~~ 461 (536)
T TIGR01512 404 ----------------------EVHAELLPEDKLEIVKELREKYGPVAMVGDGINDAPALAAADVGIAMGASGSDVAIET 461 (536)
T ss_pred ----------------------hhhhccCcHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHhCCEEEEeCCCccHHHHHh
Confidence 2688899999999999999999999999999999999999999999994445444445
Q ss_pred CCccc
Q 001010 839 SSSEA 843 (1191)
Q Consensus 839 sdi~~ 843 (1191)
+|+++
T Consensus 462 ad~vl 466 (536)
T TIGR01512 462 ADVVL 466 (536)
T ss_pred CCEEE
Confidence 55444
|
. |
| >TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-61 Score=592.51 Aligned_cols=449 Identities=22% Similarity=0.260 Sum_probs=352.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc-CCceEEEEEC-CEEEEEecCCCCCCcEEEEcCCCCCCCCCceee
Q 001010 218 YWYYSLFTLFMLFMFESTMAKSRLKTLTEIRRVRV-DNQTIMVHRC-GKWVKLAGTDLVPGDVVSIGRSSGQTGEDKSVP 295 (1191)
Q Consensus 218 y~~ysl~~l~m~vv~~~~~~~~~~r~~~~l~~m~~-~~~~v~V~R~-g~~~~I~s~eLvpGDIV~l~~g~gd~~~~~~VP 295 (1191)
||..+..+++++.+.+....+.+.|+.+.++++.. .|..++|+|+ |++++|++++|+|||+|.|++| ++||
T Consensus 53 ~~~~~~~i~~~~~~g~~le~~~~~~a~~~~~~L~~~~p~~a~~~~~~~~~~~v~~~~l~~GDii~v~~G-------e~iP 125 (562)
T TIGR01511 53 FFDASAMLITFILLGRWLEMLAKGRASDALSKLAKLQPSTATLLTKDGSIEEVPVALLQPGDIVKVLPG-------EKIP 125 (562)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEECCCeEEEEEHHHCCCCCEEEECCC-------CEec
Confidence 43333333344444445555666666666666554 5788999985 7789999999999999999987 8999
Q ss_pred eeEEEEecceeeecccccCCCCceecccccCCCCccccccccCCCeeEeeceEEeecCCCCCCCCCCCCCcEEEEEEEec
Q 001010 296 ADMLILGGSAIVNEAILTGESTPQWKVSIMGRETGEKLSARRDKSHVLFGGTKILQHTPDKTFPLKTPDGGCLAVVLRTG 375 (1191)
Q Consensus 296 aD~iLl~G~~~VdES~LTGES~Pv~K~~i~~~~~~~~~~~~~~k~~~lfaGT~vlq~~~~~~~~~~~~~g~~~~vV~~TG 375 (1191)
|||++++|++.||||+|||||.|+.|.+ ++.+|+||.++ +|.+.+.|++||
T Consensus 126 ~Dg~v~~g~~~vdes~lTGEs~pv~k~~----------------gd~V~aGt~~~-------------~g~~~~~v~~~g 176 (562)
T TIGR01511 126 VDGTVIEGESEVDESLVTGESLPVPKKV----------------GDPVIAGTVNG-------------TGSLVVRATATG 176 (562)
T ss_pred CceEEEECceEEehHhhcCCCCcEEcCC----------------CCEEEeeeEEC-------------CceEEEEEEEec
Confidence 9999999999999999999999999985 78899999999 899999999999
Q ss_pred ccchhhHHHHHhccccccccchh----hhHHHHHHHHHHHHHHhhheeeeecccCCCcchhHHHHHHHHhhhhccCCCcc
Q 001010 376 FETSQGKLMRTILFSTERVTANS----WESGLFILFLVVFAVIAAGYVLKKGMEDPTRSKYKLFLSCSLIITSVIPPELP 451 (1191)
Q Consensus 376 ~~T~~Gkl~r~i~~~~~~~~~~~----~~~~~fi~~lli~aii~~~~~~~~~~~~~~~~~~~~~l~~i~iit~~vP~~LP 451 (1191)
.+|..|++++.+..+..+.++.+ +.+.+|+.++++++++.+.+|+ ..+.+++.+++++|||+|+
T Consensus 177 ~~t~~~~i~~~v~~a~~~k~~~~~~~d~~a~~~~~~v~~~a~~~~~~~~------------~~~~~~~svlvvacPcaL~ 244 (562)
T TIGR01511 177 EDTTLAQIVRLVRQAQQSKAPIQRLADKVAGYFVPVVIAIALITFVIWL------------FALEFAVTVLIIACPCALG 244 (562)
T ss_pred CCChHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHH------------HHHHHHHHHHHHhccchhh
Confidence 99999999999877666555543 3445666666666665544432 2577889999999999999
Q ss_pred hHHHHHHHHHHHHHHhcCccccCCCcccccCCccEEEecccccccCCceEEEEEeecCCCccccccCCCchHHHHHHhhc
Q 001010 452 MELSIAVNTSLIALARRGIFCTEPFRIPFAGKVDMCCFDKTGTLTSDDMEFRGVVGLSNAELEDDMTKVPVRTQEILASC 531 (1191)
Q Consensus 452 ~~lslav~~s~~~L~k~~I~~~~p~~i~~~G~vd~icfDKTGTLT~~~l~v~gv~~~~~~~~~~~~~~~~~~~~~~la~c 531 (1191)
+++++++..++.+++|+||+++++..+|.++++|++|||||||||+|+|.+.++...++. . ...++..|
T Consensus 245 la~p~a~~~~~~~aa~~gIlik~~~~lE~l~~v~~i~fDKTGTLT~g~~~v~~i~~~~~~---------~--~~~~l~~a 313 (562)
T TIGR01511 245 LATPTVIAVATGLAAKNGVLIKDGDALERAANIDTVVFDKTGTLTQGKPTVTDVHVFGDR---------D--RTELLALA 313 (562)
T ss_pred hHHHHHHHHHHHHHHHCCeEEcChHHHHHhhCCCEEEECCCCCCcCCCEEEEEEecCCCC---------C--HHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999998765431 0 12234444
Q ss_pred cceEEeCCcccCChHHHHHHhcccccccCCCccccCCCCCCcccEEEEecCCCCCCcEEEEEEeCCeEEEEEeCcHHHHH
Q 001010 532 HALVFVDNKLVGDPLEKAALKGIDWSYKSDEKAMPKRGGGNAVQIVQRHHFASHLKRMSVVVRVQEEFFAFVKGAPETIQ 611 (1191)
Q Consensus 532 hsl~~~~~~~~GdPle~all~~~~~~~~~~~~~~~~~~~~~~~~il~~~~Fss~~krmsvvv~~~~~~~~~~KGapE~I~ 611 (1191)
++++.. ..||+++|+++++.-. +... ....-.+.+ ...++.+..+++ .+..|+++.+.
T Consensus 314 a~~e~~----s~HPia~Ai~~~~~~~---~~~~-------~~~~~~~~~------~g~Gi~~~~~g~--~~~iG~~~~~~ 371 (562)
T TIGR01511 314 AALEAG----SEHPLAKAIVSYAKEK---GITL-------VEVSDFKAI------PGIGVEGTVEGT--KIQLGNEKLLG 371 (562)
T ss_pred HHHhcc----CCChHHHHHHHHHHhc---CCCc-------CCCCCeEEE------CCceEEEEECCE--EEEEECHHHHH
Confidence 455432 4689999999876311 0000 000101111 123455556664 46689999986
Q ss_pred HhccCChHHHHHHHHHHHHhcCeeeeEEEEeCCCCChhhhhhccccccccCeEEeeeecccCcCCchhHHHHHHHHhcCC
Q 001010 612 DRLTDLPSSYIETYKKYTHQGSRVLALAFKSLPDMTVSDARSLHRDEVENGLTFAGFAVFNCPIREDSAKILSELKNSSQ 691 (1191)
Q Consensus 612 ~~~~~~p~~~~~~~~~~a~~G~RVLalA~k~l~~~~~~~~~~~~r~~~E~dL~flG~l~~~d~lK~da~~~I~~L~~agi 691 (1191)
+....++ .+.++|.+++.++ .|.+++|.+.++|++||+++++|++|++.|+
T Consensus 372 ~~~~~~~--------~~~~~g~~~~~~~---------------------~~~~~~g~~~~~d~l~~~a~e~i~~Lk~~Gi 422 (562)
T TIGR01511 372 ENAIKID--------GKAEQGSTSVLVA---------------------VNGELAGVFALEDQLRPEAKEVIQALKRRGI 422 (562)
T ss_pred hCCCCCC--------hhhhCCCEEEEEE---------------------ECCEEEEEEEecccccHHHHHHHHHHHHcCC
Confidence 6433332 2357898888776 3778999999999999999999999999999
Q ss_pred cEEEEcCCCHHHHHHHHHHcCCCCCCcEEEeecCCCceeeecCCCccccccCChHHHhcccccceEEEechhhhhhcchH
Q 001010 692 DLAMITGDQALTACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLTDAHDLCIGGDCFEMLQQTS 771 (1191)
Q Consensus 692 ~vvMiTGDn~~TA~~VA~~~gI~~~~~~il~~~~~~~~~~w~~~d~~~~~~~~~~~~~~~~~~~~l~itG~~l~~l~~~~ 771 (1191)
+++|+|||+..+|..+|+++||.
T Consensus 423 ~v~ilSgd~~~~a~~ia~~lgi~--------------------------------------------------------- 445 (562)
T TIGR01511 423 EPVMLTGDNRKTAKAVAKELGIN--------------------------------------------------------- 445 (562)
T ss_pred eEEEEcCCCHHHHHHHHHHcCCc---------------------------------------------------------
Confidence 99999999999999999999981
Q ss_pred HHHhhcCcceEEeecChhhHHHHHHHHhHcCCEEEEEcCCccCHHHHhhCCceEEeccCCCccccccCCcccc
Q 001010 772 AVLRVIPYVKVFARVAPEQKELILTTFKAVGRMTLMCGDGTNDVGALKQAHVGVALLNAVPPTQSGNSSSEAS 844 (1191)
Q Consensus 772 ~~~~~l~~~~VfAR~sP~qK~~iV~~Lq~~g~~V~m~GDG~ND~~ALk~AdVGIAl~~~~~e~~~~asdi~~~ 844 (1191)
+|+++.|++|.++++.+++.|+.|+|+|||.||++|+++|||||+++. +++.+++++|+++.
T Consensus 446 ----------~~~~~~p~~K~~~v~~l~~~~~~v~~VGDg~nD~~al~~A~vgia~g~-g~~~a~~~Advvl~ 507 (562)
T TIGR01511 446 ----------VRAEVLPDDKAALIKELQEKGRVVAMVGDGINDAPALAQADVGIAIGA-GTDVAIEAADVVLM 507 (562)
T ss_pred ----------EEccCChHHHHHHHHHHHHcCCEEEEEeCCCccHHHHhhCCEEEEeCC-cCHHHHhhCCEEEe
Confidence 677889999999999999999999999999999999999999999995 44555555555553
|
One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification. |
| >KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.6e-63 Score=587.71 Aligned_cols=458 Identities=23% Similarity=0.265 Sum_probs=374.6
Q ss_pred HHHHHHHHHHHHhhc-cCCceEEEEECCE-EEEEecCCCCCCcEEEEcCCCCCCCCCceeeeeEEEEecceeeecccccC
Q 001010 237 AKSRLKTLTEIRRVR-VDNQTIMVHRCGK-WVKLAGTDLVPGDVVSIGRSSGQTGEDKSVPADMLILGGSAIVNEAILTG 314 (1191)
Q Consensus 237 ~~~~~r~~~~l~~m~-~~~~~v~V~R~g~-~~~I~s~eLvpGDIV~l~~g~gd~~~~~~VPaD~iLl~G~~~VdES~LTG 314 (1191)
.+.+.|+.+.+.++. ..|.++.+.-+|+ .++|+.+.+.+||+|.|.+| ++||+||++++|++.||||++||
T Consensus 359 ~~Ak~kts~alskLmsl~p~~a~ii~~g~~e~eI~v~lvq~gdivkV~pG-------~kiPvDG~Vv~Gss~VDEs~iTG 431 (951)
T KOG0207|consen 359 SLAKGKTSEALSKLMSLAPSKATIIEDGSEEKEIPVDLVQVGDIVKVKPG-------EKIPVDGVVVDGSSEVDESLITG 431 (951)
T ss_pred HHhhccchHHHHHHhhcCcccceEeecCCcceEeeeeeeccCCEEEECCC-------CccccccEEEeCceeechhhccC
Confidence 344455556665543 3688999999986 89999999999999999998 79999999999999999999999
Q ss_pred CCCceecccccCCCCccccccccCCCeeEeeceEEeecCCCCCCCCCCCCCcEEEEEEEecccchhhHHHHHhccccccc
Q 001010 315 ESTPQWKVSIMGRETGEKLSARRDKSHVLFGGTKILQHTPDKTFPLKTPDGGCLAVVLRTGFETSQGKLMRTILFSTERV 394 (1191)
Q Consensus 315 ES~Pv~K~~i~~~~~~~~~~~~~~k~~~lfaGT~vlq~~~~~~~~~~~~~g~~~~vV~~TG~~T~~Gkl~r~i~~~~~~~ 394 (1191)
||+||.|++ ++.+.+||.+. +|.....++++|.+|..+++++.+...+..+
T Consensus 432 Es~PV~Kk~----------------gs~ViaGsiN~-------------nG~l~VkaT~~g~dttla~IvkLVEEAQ~sK 482 (951)
T KOG0207|consen 432 ESMPVPKKK----------------GSTVIAGSINL-------------NGTLLVKATKVGGDTTLAQIVKLVEEAQLSK 482 (951)
T ss_pred CceecccCC----------------CCeeeeeeecC-------------CceEEEEEEeccccchHHHHHHHHHHHHccc
Confidence 999999985 89999999999 8999999999999999999999998877666
Q ss_pred cchh----hhHHHHHHHHHHHHHHhhheeeeecccCCC------cchhHHHHHHHHhhhhccCCCcchHHHHHHHHHHHH
Q 001010 395 TANS----WESGLFILFLVVFAVIAAGYVLKKGMEDPT------RSKYKLFLSCSLIITSVIPPELPMELSIAVNTSLIA 464 (1191)
Q Consensus 395 ~~~~----~~~~~fi~~lli~aii~~~~~~~~~~~~~~------~~~~~~~l~~i~iit~~vP~~LP~~lslav~~s~~~ 464 (1191)
.+.+ +.+.+|..++++++++.+.+|...+..... ..+...+..++.+++++|||+|.++.++|+..+...
T Consensus 483 apiQq~aDkia~yFvP~Vi~lS~~t~~~w~~~g~~~~~~~~~~~~~~~~a~~~aisVlviACPCaLgLATPtAvmvatgv 562 (951)
T KOG0207|consen 483 APIQQLADKIAGYFVPVVIVLSLATFVVWILIGKIVFKYPRSFFDAFSHAFQLAISVLVIACPCALGLATPTAVMVATGV 562 (951)
T ss_pred chHHHHHHHhhhcCCchhhHHHHHHHHHHHHHccccccCcchhhHHHHHHHHhhheEEEEECchhhhcCCceEEEEEech
Confidence 6644 456678888888777766666544432111 223445677888999999999999999999999989
Q ss_pred HHhcCccccCCCcccccCCccEEEecccccccCCceEEEEEeecCCCccccccCCCchHHHHHHhhccceEEeCCcccCC
Q 001010 465 LARRGIFCTEPFRIPFAGKVDMCCFDKTGTLTSDDMEFRGVVGLSNAELEDDMTKVPVRTQEILASCHALVFVDNKLVGD 544 (1191)
Q Consensus 465 L~k~~I~~~~p~~i~~~G~vd~icfDKTGTLT~~~l~v~gv~~~~~~~~~~~~~~~~~~~~~~la~chsl~~~~~~~~Gd 544 (1191)
.+++||++|..+.+|.+.+|++++||||||||+|++.+..+....+. . ....+++...+.+ .-..|
T Consensus 563 gA~nGvLIKGge~LE~~hkv~tVvFDKTGTLT~G~~~V~~~~~~~~~--------~--~~~e~l~~v~a~E----s~SeH 628 (951)
T KOG0207|consen 563 GATNGVLIKGGEALEKAHKVKTVVFDKTGTLTEGKPTVVDFKSLSNP--------I--SLKEALALVAAME----SGSEH 628 (951)
T ss_pred hhhcceEEcCcHHHHHHhcCCEEEEcCCCceecceEEEEEEEecCCc--------c--cHHHHHHHHHHHh----cCCcC
Confidence 99999999999999999999999999999999999999998876541 1 1223333333333 12469
Q ss_pred hHHHHHHhcccccccCCCccccCCCCCCcccEEEEecCCCCCCcEEEEEEeCCeEEEEEeCcHHHHHHhccCChHHHHHH
Q 001010 545 PLEKAALKGIDWSYKSDEKAMPKRGGGNAVQIVQRHHFASHLKRMSVVVRVQEEFFAFVKGAPETIQDRLTDLPSSYIET 624 (1191)
Q Consensus 545 Ple~all~~~~~~~~~~~~~~~~~~~~~~~~il~~~~Fss~~krmsvvv~~~~~~~~~~KGapE~I~~~~~~~p~~~~~~ 624 (1191)
|+.+|+.+++.-....... -.+...-.|..+-.. +-+...++. ..-|+-|.+.+.-...|++.++.
T Consensus 629 Pig~AIv~yak~~~~~~~~----------~~~~~~~~~pg~g~~--~~~~~~~~~--i~iGN~~~~~r~~~~~~~~i~~~ 694 (951)
T KOG0207|consen 629 PIGKAIVDYAKEKLVEPNP----------EGVLSFEYFPGEGIY--VTVTVDGNE--VLIGNKEWMSRNGCSIPDDILDA 694 (951)
T ss_pred chHHHHHHHHHhcccccCc----------cccceeecccCCCcc--cceEEeeeE--EeechHHHHHhcCCCCchhHHHh
Confidence 9999999987532211100 011111112111111 222333332 67799999999888899999999
Q ss_pred HHHHHHhcCeeeeEEEEeCCCCChhhhhhccccccccCeEEeeeecccCcCCchhHHHHHHHHhcCCcEEEEcCCCHHHH
Q 001010 625 YKKYTHQGSRVLALAFKSLPDMTVSDARSLHRDEVENGLTFAGFAVFNCPIREDSAKILSELKNSSQDLAMITGDQALTA 704 (1191)
Q Consensus 625 ~~~~a~~G~RVLalA~k~l~~~~~~~~~~~~r~~~E~dL~flG~l~~~d~lK~da~~~I~~L~~agi~vvMiTGDn~~TA 704 (1191)
.++..++|..|..+++ |.+++|++.++|++|||+..+|+.||+.|++++|+||||..||
T Consensus 695 ~~~~e~~g~tvv~v~v---------------------n~~l~gv~~l~D~vr~~a~~av~~Lk~~Gi~v~mLTGDn~~aA 753 (951)
T KOG0207|consen 695 LTESERKGQTVVYVAV---------------------NGQLVGVFALEDQVRPDAALAVAELKSMGIKVVMLTGDNDAAA 753 (951)
T ss_pred hhhHhhcCceEEEEEE---------------------CCEEEEEEEeccccchhHHHHHHHHHhcCceEEEEcCCCHHHH
Confidence 9999999999999995 6789999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCCCCcEEEeecCCCceeeecCCCccccccCChHHHhcccccceEEEechhhhhhcchHHHHhhcCcceEEe
Q 001010 705 CYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLTDAHDLCIGGDCFEMLQQTSAVLRVIPYVKVFA 784 (1191)
Q Consensus 705 ~~VA~~~gI~~~~~~il~~~~~~~~~~w~~~d~~~~~~~~~~~~~~~~~~~~l~itG~~l~~l~~~~~~~~~l~~~~VfA 784 (1191)
.++|+++||. .|||
T Consensus 754 ~svA~~VGi~------------------------------------------------------------------~V~a 767 (951)
T KOG0207|consen 754 RSVAQQVGID------------------------------------------------------------------NVYA 767 (951)
T ss_pred HHHHHhhCcc------------------------------------------------------------------eEEe
Confidence 9999999973 4999
Q ss_pred ecChhhHHHHHHHHhHcCCEEEEEcCCccCHHHHhhCCceEEeccCCCccccccCCcccccc
Q 001010 785 RVAPEQKELILTTFKAVGRMTLMCGDGTNDVGALKQAHVGVALLNAVPPTQSGNSSSEASKD 846 (1191)
Q Consensus 785 R~sP~qK~~iV~~Lq~~g~~V~m~GDG~ND~~ALk~AdVGIAl~~~~~e~~~~asdi~~~~~ 846 (1191)
.+.|+||.++|+.||+.|..|+|||||+||+|||.+|||||||+.+ ++++.|++|++++++
T Consensus 768 ev~P~~K~~~Ik~lq~~~~~VaMVGDGINDaPALA~AdVGIaig~g-s~vAieaADIVLmrn 828 (951)
T KOG0207|consen 768 EVLPEQKAEKIKEIQKNGGPVAMVGDGINDAPALAQADVGIAIGAG-SDVAIEAADIVLMRN 828 (951)
T ss_pred ccCchhhHHHHHHHHhcCCcEEEEeCCCCccHHHHhhccceeeccc-cHHHHhhCCEEEEcc
Confidence 9999999999999999999999999999999999999999999966 899999999999766
|
|
| >PRK10671 copA copper exporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-60 Score=609.88 Aligned_cols=462 Identities=23% Similarity=0.290 Sum_probs=363.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc-CCceEEEEECCEEEEEecCCCCCCcEEEEcCCCCCCCCCceeeeeEEE
Q 001010 222 SLFTLFMLFMFESTMAKSRLKTLTEIRRVRV-DNQTIMVHRCGKWVKLAGTDLVPGDVVSIGRSSGQTGEDKSVPADMLI 300 (1191)
Q Consensus 222 sl~~l~m~vv~~~~~~~~~~r~~~~l~~m~~-~~~~v~V~R~g~~~~I~s~eLvpGDIV~l~~g~gd~~~~~~VPaD~iL 300 (1191)
+..+++++.+.+....+.+.|+.+.++++.. .|..++|+|+|++++|++++|+|||+|.|++| ++|||||++
T Consensus 289 ~~~i~~~~~~g~~le~~~~~~~~~~~~~L~~l~p~~a~~~~~~~~~~v~~~~l~~GD~v~v~~G-------~~iP~Dg~v 361 (834)
T PRK10671 289 SAMIIGLINLGHMLEARARQRSSKALEKLLDLTPPTARVVTDEGEKSVPLADVQPGMLLRLTTG-------DRVPVDGEI 361 (834)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEEEeCCcEEEEEHHHcCCCCEEEEcCC-------CEeeeeEEE
Confidence 3344444444455555666666666666554 58899999999999999999999999999988 799999999
Q ss_pred EecceeeecccccCCCCceecccccCCCCccccccccCCCeeEeeceEEeecCCCCCCCCCCCCCcEEEEEEEecccchh
Q 001010 301 LGGSAIVNEAILTGESTPQWKVSIMGRETGEKLSARRDKSHVLFGGTKILQHTPDKTFPLKTPDGGCLAVVLRTGFETSQ 380 (1191)
Q Consensus 301 l~G~~~VdES~LTGES~Pv~K~~i~~~~~~~~~~~~~~k~~~lfaGT~vlq~~~~~~~~~~~~~g~~~~vV~~TG~~T~~ 380 (1191)
++|++.||||+|||||.|+.|.+ ++.+|+||.+. +|.+.+.|++||.+|..
T Consensus 362 ~~g~~~vdeS~lTGEs~pv~k~~----------------gd~V~aGt~~~-------------~G~~~~~v~~~g~~t~l 412 (834)
T PRK10671 362 TQGEAWLDEAMLTGEPIPQQKGE----------------GDSVHAGTVVQ-------------DGSVLFRASAVGSHTTL 412 (834)
T ss_pred EEceEEEeehhhcCCCCCEecCC----------------CCEEEecceec-------------ceeEEEEEEEEcCcChH
Confidence 99999999999999999999985 78899999999 89999999999999999
Q ss_pred hHHHHHhccccccccch----hhhHHHHHHHHHHHHHHhhheeeeecccCCCcchhHHHHHHHHhhhhccCCCcchHHHH
Q 001010 381 GKLMRTILFSTERVTAN----SWESGLFILFLVVFAVIAAGYVLKKGMEDPTRSKYKLFLSCSLIITSVIPPELPMELSI 456 (1191)
Q Consensus 381 Gkl~r~i~~~~~~~~~~----~~~~~~fi~~lli~aii~~~~~~~~~~~~~~~~~~~~~l~~i~iit~~vP~~LP~~lsl 456 (1191)
|++++.+......+.+. ++.+.+|+.++++++++.+.+|+..+. ...+...+..++.+++++|||+|++++++
T Consensus 413 ~~i~~lv~~a~~~k~~~~~~~d~~a~~~v~~v~~~a~~~~~~~~~~~~---~~~~~~~~~~a~~vlv~acPcaL~la~p~ 489 (834)
T PRK10671 413 SRIIRMVRQAQSSKPEIGQLADKISAVFVPVVVVIALVSAAIWYFFGP---APQIVYTLVIATTVLIIACPCALGLATPM 489 (834)
T ss_pred HHHHHHHHHHhccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC---chHHHHHHHHHHHHHHHhcccchhhhHHH
Confidence 99999987665444433 345567777777777766655544331 11234456778999999999999999999
Q ss_pred HHHHHHHHHHhcCccccCCCcccccCCccEEEecccccccCCceEEEEEeecCCCccccccCCCchHHHHHHhhccceEE
Q 001010 457 AVNTSLIALARRGIFCTEPFRIPFAGKVDMCCFDKTGTLTSDDMEFRGVVGLSNAELEDDMTKVPVRTQEILASCHALVF 536 (1191)
Q Consensus 457 av~~s~~~L~k~~I~~~~p~~i~~~G~vd~icfDKTGTLT~~~l~v~gv~~~~~~~~~~~~~~~~~~~~~~la~chsl~~ 536 (1191)
++..++.+++|+||++|++..+|.+|++|++|||||||||+|+|+|..+...++. .. ..++..+.+++
T Consensus 490 a~~~~~~~~a~~gilvk~~~~le~l~~v~~v~fDKTGTLT~g~~~v~~~~~~~~~---------~~--~~~l~~a~~~e- 557 (834)
T PRK10671 490 SIISGVGRAAEFGVLVRDADALQRASTLDTLVFDKTGTLTEGKPQVVAVKTFNGV---------DE--AQALRLAAALE- 557 (834)
T ss_pred HHHHHHHHHHHCCeEEecHHHHHhhcCCCEEEEcCCCccccCceEEEEEEccCCC---------CH--HHHHHHHHHHh-
Confidence 9999999999999999999999999999999999999999999999988754330 01 12222222332
Q ss_pred eCCcccCChHHHHHHhcccccccCCCccccCCCCCCcccEEEEecCCCCCCcEEEEEEeCCeEEEEEeCcHHHHHHhccC
Q 001010 537 VDNKLVGDPLEKAALKGIDWSYKSDEKAMPKRGGGNAVQIVQRHHFASHLKRMSVVVRVQEEFFAFVKGAPETIQDRLTD 616 (1191)
Q Consensus 537 ~~~~~~GdPle~all~~~~~~~~~~~~~~~~~~~~~~~~il~~~~Fss~~krmsvvv~~~~~~~~~~KGapE~I~~~~~~ 616 (1191)
.-..||+++|++++..- . ..+ .. .+|.... ..++....+++ .+.+|+++.+.+....
T Consensus 558 ---~~s~hp~a~Ai~~~~~~-~-----~~~------~~-----~~~~~~~-g~Gv~~~~~g~--~~~~G~~~~~~~~~~~ 614 (834)
T PRK10671 558 ---QGSSHPLARAILDKAGD-M-----TLP------QV-----NGFRTLR-GLGVSGEAEGH--ALLLGNQALLNEQQVD 614 (834)
T ss_pred ---CCCCCHHHHHHHHHHhh-C-----CCC------Cc-----ccceEec-ceEEEEEECCE--EEEEeCHHHHHHcCCC
Confidence 12479999999886530 0 000 00 1122111 22444444554 4567999988664332
Q ss_pred ChHHHHHHHHHHHHhcCeeeeEEEEeCCCCChhhhhhccccccccCeEEeeeecccCcCCchhHHHHHHHHhcCCcEEEE
Q 001010 617 LPSSYIETYKKYTHQGSRVLALAFKSLPDMTVSDARSLHRDEVENGLTFAGFAVFNCPIREDSAKILSELKNSSQDLAMI 696 (1191)
Q Consensus 617 ~p~~~~~~~~~~a~~G~RVLalA~k~l~~~~~~~~~~~~r~~~E~dL~flG~l~~~d~lK~da~~~I~~L~~agi~vvMi 696 (1191)
. +...+..+.+.++|.+++.+++ |..++|++.++|++||+++++|++|++.|++++|+
T Consensus 615 ~-~~~~~~~~~~~~~g~~~v~va~---------------------~~~~~g~~~l~d~~r~~a~~~i~~L~~~gi~v~~~ 672 (834)
T PRK10671 615 T-KALEAEITAQASQGATPVLLAV---------------------DGKAAALLAIRDPLRSDSVAALQRLHKAGYRLVML 672 (834)
T ss_pred h-HHHHHHHHHHHhCCCeEEEEEE---------------------CCEEEEEEEccCcchhhHHHHHHHHHHCCCeEEEE
Confidence 2 3456667788899999999985 44689999999999999999999999999999999
Q ss_pred cCCCHHHHHHHHHHcCCCCCCcEEEeecCCCceeeecCCCccccccCChHHHhcccccceEEEechhhhhhcchHHHHhh
Q 001010 697 TGDQALTACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLTDAHDLCIGGDCFEMLQQTSAVLRV 776 (1191)
Q Consensus 697 TGDn~~TA~~VA~~~gI~~~~~~il~~~~~~~~~~w~~~d~~~~~~~~~~~~~~~~~~~~l~itG~~l~~l~~~~~~~~~ 776 (1191)
|||+..+|..+|+++||.
T Consensus 673 Tgd~~~~a~~ia~~lgi~-------------------------------------------------------------- 690 (834)
T PRK10671 673 TGDNPTTANAIAKEAGID-------------------------------------------------------------- 690 (834)
T ss_pred cCCCHHHHHHHHHHcCCC--------------------------------------------------------------
Confidence 999999999999999993
Q ss_pred cCcceEEeecChhhHHHHHHHHhHcCCEEEEEcCCccCHHHHhhCCceEEeccCCCccccccCCcccccc
Q 001010 777 IPYVKVFARVAPEQKELILTTFKAVGRMTLMCGDGTNDVGALKQAHVGVALLNAVPPTQSGNSSSEASKD 846 (1191)
Q Consensus 777 l~~~~VfAR~sP~qK~~iV~~Lq~~g~~V~m~GDG~ND~~ALk~AdVGIAl~~~~~e~~~~asdi~~~~~ 846 (1191)
.+|+++.|++|.++++.++..|+.|+|+|||.||++||++||+||+|+++ ++..++++|++++++
T Consensus 691 ----~~~~~~~p~~K~~~i~~l~~~~~~v~~vGDg~nD~~al~~Agvgia~g~g-~~~a~~~ad~vl~~~ 755 (834)
T PRK10671 691 ----EVIAGVLPDGKAEAIKRLQSQGRQVAMVGDGINDAPALAQADVGIAMGGG-SDVAIETAAITLMRH 755 (834)
T ss_pred ----EEEeCCCHHHHHHHHHHHhhcCCEEEEEeCCHHHHHHHHhCCeeEEecCC-CHHHHHhCCEEEecC
Confidence 37889999999999999999999999999999999999999999999964 555555666555433
|
|
| >KOG0206 consensus P-type ATPase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-62 Score=611.72 Aligned_cols=762 Identities=21% Similarity=0.269 Sum_probs=493.6
Q ss_pred HHhccCCCccCCCCCcHHH----HHHHHhhhHHHHHHHHHHHHHhhh---hHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001010 174 ATEKWGRNVFEYPQPTFQK----LMKENCMEPFFVFQVFCVGLWCLD---EYWYYSLFTLFMLFMFESTMAKSRLKTLTE 246 (1191)
Q Consensus 174 ~~~~yG~N~i~i~~~s~~~----ll~~~~~~pf~vfqi~~v~lw~l~---~y~~ysl~~l~m~vv~~~~~~~~~~r~~~~ 246 (1191)
+...|-.|.+...+.+++. .+++||..+-++|-++..+|-+.. ..++.+++ .+++++..+.+++.....++
T Consensus 28 ~~~~~~~N~i~TtKYt~~tFlPk~l~eQf~r~aN~yFl~~~il~~ip~~~~~~~~~~~--pl~~vl~~t~iKd~~eD~rR 105 (1151)
T KOG0206|consen 28 PQRKYCDNRISTTKYTLFTFLPKNLFEQFHRVANLYFLFIAILQFIPLSPFNPYTTLV--PLLFVLGITAIKDAIEDYRR 105 (1151)
T ss_pred hhccccCCeeEEEeccchhhhHHHHHHHHHHHHHHHHHHHHHHHcCcccccCccceee--ceeeeehHHHHHHHHhhhhh
Confidence 4558999999998876554 456777777677766666665543 11222222 23334444555544333333
Q ss_pred HHhhcc-CCceEEEEECCE-EEEEecCCCCCCcEEEEcCCCCCCCCCceeeeeEEEEe-----cceeeecccccCCCCce
Q 001010 247 IRRVRV-DNQTIMVHRCGK-WVKLAGTDLVPGDVVSIGRSSGQTGEDKSVPADMLILG-----GSAIVNEAILTGESTPQ 319 (1191)
Q Consensus 247 l~~m~~-~~~~v~V~R~g~-~~~I~s~eLvpGDIV~l~~g~gd~~~~~~VPaD~iLl~-----G~~~VdES~LTGES~Pv 319 (1191)
-+.-.. ++.++.|.|++. +++..+++|.+||+|.+..+ +.+|||.+|++ |.|.|+.++|.||+...
T Consensus 106 ~~~D~~iN~~~~~v~~~~~~~~~~~wk~~~vGd~v~v~~~-------~~~paD~llLsss~~~~~cyveT~nLDGEtnLK 178 (1151)
T KOG0206|consen 106 HKQDKEVNNRKVEVLRGDGCFVEKKWKDVRVGDIVRVEKD-------EFVPADLLLLSSSDEDGICYVETANLDGETNLK 178 (1151)
T ss_pred hhccHHhhcceeEEecCCceeeeeccceeeeeeEEEeccC-------CccccceEEecCCCCCceeEEEEeecCCccccc
Confidence 322222 467889998643 89999999999999999976 79999999995 67999999999999999
Q ss_pred ecccccCCCCc---c-cccc----cc---CCCeeEeeceEEeecCC-CCC--------CCCCCCCCcEEEEEEEecccch
Q 001010 320 WKVSIMGRETG---E-KLSA----RR---DKSHVLFGGTKILQHTP-DKT--------FPLKTPDGGCLAVVLRTGFETS 379 (1191)
Q Consensus 320 ~K~~i~~~~~~---~-~~~~----~~---~k~~~lfaGT~vlq~~~-~~~--------~~~~~~~g~~~~vV~~TG~~T~ 379 (1191)
.|.+++..... + ..+. .. +..-.-|-|+.-.+... +-+ ..++ ....+.++|+.||.+|
T Consensus 179 ~k~~l~~~~~~~~~~~~~~~~~~i~cE~p~~~ly~f~g~l~~~~~~~pl~~~~~Llrg~~lr-NT~~v~G~vv~tG~dt- 256 (1151)
T KOG0206|consen 179 VKQALECTSKLDSEDSLKNFKGWIECEDPNANLYTFVGNLELQGQIYPLSPDNLLLRGSRLR-NTEWVYGVVVFTGHDT- 256 (1151)
T ss_pred eeeehhhhhcccccccccccCCceEEcCCcccHhhhhhheeeccCCCCCcHHHcccCCceec-cCcEEEEEEEEcCCcc-
Confidence 99886542110 0 0000 00 01111123333222111 000 0111 2568999999999999
Q ss_pred hhHHHHHhccccccccchhhhHHHHHH----HHHHHHH---Hhhheeeeec-cc-------CCC---cchhHHHHHHHHh
Q 001010 380 QGKLMRTILFSTERVTANSWESGLFIL----FLVVFAV---IAAGYVLKKG-ME-------DPT---RSKYKLFLSCSLI 441 (1191)
Q Consensus 380 ~Gkl~r~i~~~~~~~~~~~~~~~~fi~----~lli~ai---i~~~~~~~~~-~~-------~~~---~~~~~~~l~~i~i 441 (1191)
|+++.-..+..+.+...+....++. +++.+++ +..+++.... .. .+. ......++..+.+
T Consensus 257 --K~~~n~~~~~~Krs~ier~~n~~i~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~t~~il 334 (1151)
T KOG0206|consen 257 --KLMQNSGKPPSKRSRIERKMNKIIILLFVLLILMCLISAIGFAIWTRQDGRHNGEWWYLSPSEAAYAGFVHFLTFIIL 334 (1151)
T ss_pred --hHHHhcCCCccccchhhhhhhhhHHHHHHHHHHHHHHHHhhhheeeeecccccCchhhhcCchHHHHHHHHHHHHHhh
Confidence 4444443333333333333222211 1111111 1122222211 00 000 1123345667778
Q ss_pred hhhccCCCcchHHHHHHHHHHH------HHH----hcCccccCCCcccccCCccEEEecccccccCCceEEEEEeecCC-
Q 001010 442 ITSVIPPELPMELSIAVNTSLI------ALA----RRGIFCTEPFRIPFAGKVDMCCFDKTGTLTSDDMEFRGVVGLSN- 510 (1191)
Q Consensus 442 it~~vP~~LP~~lslav~~s~~------~L~----k~~I~~~~p~~i~~~G~vd~icfDKTGTLT~~~l~v~gv~~~~~- 510 (1191)
...++|.+|.+.+.+.-..... .|. .....|+...--|.+|+|+++..|||||||+|.|.+..+...+.
T Consensus 335 ~~~liPISLyvsiEiik~~qs~fi~~D~~my~~e~d~~~~~rtsnl~eeLGqv~yIfSDKTGTLT~N~M~F~kCsi~g~~ 414 (1151)
T KOG0206|consen 335 YQYLIPISLYVSIEIVKVLQSIFINNDLDMYDEETDTPAQARTSNLNEELGQVEYIFSDKTGTLTQNSMEFKKCSINGTS 414 (1151)
T ss_pred hhceEEEEEEEEeeehHHHHHHHcchHHHhhhccCCCccccccCCchhhhcceeEEEEcCcCccccceeeeecccccCcc
Confidence 8889999999887765444332 122 34567777777889999999999999999999999987654321
Q ss_pred -----Cc----cc-----------------cc------------cCCCchHHHHHHhhccceEEeC-Cc------ccCCh
Q 001010 511 -----AE----LE-----------------DD------------MTKVPVRTQEILASCHALVFVD-NK------LVGDP 545 (1191)
Q Consensus 511 -----~~----~~-----------------~~------------~~~~~~~~~~~la~chsl~~~~-~~------~~GdP 545 (1191)
.+ .. .+ ....-.....++|.||++.... .+ -...|
T Consensus 415 yg~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~f~~~la~chtv~~e~~~~~~~~~Y~A~SP 494 (1151)
T KOG0206|consen 415 YGRNVTEVEAALAKRSGGDVNEHKIKGFTFEDSRLVDGLWSSEPQAEDILEFFRALALCHTVIPEKDEDSGKLSYEAESP 494 (1151)
T ss_pred cccCCChhhcccCccccccccccccccceeccchhhccccccccCcchHHHHhhHHhccceeeeccCCCccceeeecCCC
Confidence 00 00 00 0001124567899999998544 11 24689
Q ss_pred HHHHHHhcc---cccccCCC---ccccCCCCCCcccEEEEecCCCCCCcEEEEEEeCC-eEEEEEeCcHHHHHHhccC--
Q 001010 546 LEKAALKGI---DWSYKSDE---KAMPKRGGGNAVQIVQRHHFASHLKRMSVVVRVQE-EFFAFVKGAPETIQDRLTD-- 616 (1191)
Q Consensus 546 le~all~~~---~~~~~~~~---~~~~~~~~~~~~~il~~~~Fss~~krmsvvv~~~~-~~~~~~KGapE~I~~~~~~-- 616 (1191)
.|.|+++++ |..+..+. ......+....+++++..+|+|.|||||||++.++ +..++||||+.+|.+++..
T Consensus 495 DE~AlV~aAr~~gf~f~~Rt~~~vti~~~g~~~~y~lL~iLeF~S~RKRMSVIVR~p~g~i~LycKGADsvI~erL~~~~ 574 (1151)
T KOG0206|consen 495 DEAALVEAARELGFVFLGRTPDSVTIRELGVEETYELLNVLEFNSTRKRMSVIVRDPDGRILLYCKGADSVIFERLSKNG 574 (1151)
T ss_pred cHHHHHHHHHhcCceeeeccCceEEEeccccceeEEEEEEeccccccceeEEEEEcCCCcEEEEEcCcchhhHhhhhhcc
Confidence 999999865 33332211 11222334568999999999999999999999976 8999999999999999963
Q ss_pred --ChHHHHHHHHHHHHhcCeeeeEEEEeCCCCChhhhhhc---------cc--------cccccCeEEeeeecccCcCCc
Q 001010 617 --LPSSYIETYKKYTHQGSRVLALAFKSLPDMTVSDARSL---------HR--------DEVENGLTFAGFAVFNCPIRE 677 (1191)
Q Consensus 617 --~p~~~~~~~~~~a~~G~RVLalA~k~l~~~~~~~~~~~---------~r--------~~~E~dL~flG~l~~~d~lK~ 677 (1191)
.-+.-.+.+++|+.+|+|+|++|||++++.+++++.+. +| +.+|+||+++|..++||+|++
T Consensus 575 ~~~~e~T~~Hl~~yA~eGLRTLc~A~r~l~e~eY~~w~~~~~~A~ts~~~Re~~L~e~ae~iEk~L~LLGATAIEDkLQd 654 (1151)
T KOG0206|consen 575 EKLREKTQEHLEEYATEGLRTLCLAYRELDEEEYEEWNERYNEAKTSLTDREELLDEVAEEIEKDLILLGATAIEDKLQD 654 (1151)
T ss_pred hHHHHHHHHHHHHHHhhhhhHhhhhhhccCHHHHHHHHHHHHHHHhhccCHHHHHHHHHHHHHhcchhhcceeeechhcc
Confidence 23344457899999999999999999998777655432 23 468999999999999999999
Q ss_pred hhHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCcE--EEeecCCCceeeecCCCccc----cc--cCC--hHH
Q 001010 678 DSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVL--ILCPVKNGKVYEWVSPDETE----KI--QYS--EKE 747 (1191)
Q Consensus 678 da~~~I~~L~~agi~vvMiTGDn~~TA~~VA~~~gI~~~~~~--il~~~~~~~~~~w~~~d~~~----~~--~~~--~~~ 747 (1191)
+++++|+.|++||||+||+|||..+||++||..|++++++.. ++...... .-...+... .+ ..+ ..+
T Consensus 655 gVPetI~~L~~AGIKIWVLTGDK~ETAiNIg~sC~Ll~~~m~~i~i~~~~~~---~~~~~~~~~~~~~~l~~~~~~~~~~ 731 (1151)
T KOG0206|consen 655 GVPETIAKLAQAGIKIWVLTGDKQETAINIGYSCRLLRQDMKLIIINTETSE---ELSSLDATAALKETLLRKFTEELEE 731 (1151)
T ss_pred CchHHHHHHHHcCCEEEEEcCcHHHHHHHHHHhhcCCCCCceEEEEecCChh---hhcchhhHHHHHHHHHHhhhHHHHH
Confidence 999999999999999999999999999999999999966433 23221110 000111100 00 000 000
Q ss_pred --HhcccccceEEEechhhhhhcchHH---HHhhcC--cceEEeecChhhHHHHHHHHhH-cCCEEEEEcCCccCHHHHh
Q 001010 748 --VEGLTDAHDLCIGGDCFEMLQQTSA---VLRVIP--YVKVFARVAPEQKELILTTFKA-VGRMTLMCGDGTNDVGALK 819 (1191)
Q Consensus 748 --~~~~~~~~~l~itG~~l~~l~~~~~---~~~~l~--~~~VfAR~sP~qK~~iV~~Lq~-~g~~V~m~GDG~ND~~ALk 819 (1191)
.....+.+.++|+|+.+.+..+.+. +..+.. +..++||+||.||+.+|+..++ .+.+|+.+|||+||++|++
T Consensus 732 ~~~~~~~~~~aLVIDGktl~~aL~~~~~~~Fl~la~~C~sViCCR~sPlQKA~Vv~lVk~~~~~~TLAIGDGANDVsMIQ 811 (1151)
T KOG0206|consen 732 AKLEHSEKPFALVIDGKTLAYALEDELRKKFLELAKRCKSVICCRVSPLQKALVVKLVKKGLKAVTLAIGDGANDVSMIQ 811 (1151)
T ss_pred HhhccCcCCceEEEECHHHHhhhCchhhHHHHHHHHhcCEEEEccCCHHHHHHHHHHHHhcCCceEEEeeCCCccchhee
Confidence 0011136899999999999887633 444443 5669999999999999999984 6899999999999999999
Q ss_pred hCCceEEeccCCCccccccCCcccccccchhhhhccccccchhhhhhhhccCCCCCCccchhhhhhhcccccccccchHH
Q 001010 820 QAHVGVALLNAVPPTQSGNSSSEASKDENTKSVKSKKSKSASEAASKAMSLNSEGTSKGKASARLEANSRTAGNRHLTAA 899 (1191)
Q Consensus 820 ~AdVGIAl~~~~~e~~~~asdi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 899 (1191)
.|||||.+++.+..++..++|+....
T Consensus 812 ~AhVGVGIsG~EGmQAvmsSD~AIaq------------------------------------------------------ 837 (1151)
T KOG0206|consen 812 EAHVGVGISGQEGMQAVMSSDFAIAQ------------------------------------------------------ 837 (1151)
T ss_pred eCCcCeeeccchhhhhhhcccchHHH------------------------------------------------------
Confidence 99999999976555444444433311
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCCCccccCcccccCCCccCcCCccchhh-hhhccchHHHHH-----HhhhHHHHHHHHH
Q 001010 900 EMQREKLKKMMEELNEEGDGRSAPIVKLGDASMASPFTAKHASVAPTTD-IIRQGRSTLVTT-----LQMFKILGLNCLA 973 (1191)
Q Consensus 900 ~~~~~~~~~~~~~~~~~~~~~~~~~~klgdASiaaPFtsk~~~i~~v~~-iir~GR~~Lvtt-----~~~fk~l~l~~li 973 (1191)
.+-... ++-+||-+.... +-.||-.++.-..
T Consensus 838 -------------------------------------------FrfL~rLLLVHGhW~Y~R~a~~ilyfFYKNi~f~~~~ 874 (1151)
T KOG0206|consen 838 -------------------------------------------FRFLERLLLVHGHWSYIRLAKMILYFFYKNIAFTFTL 874 (1151)
T ss_pred -------------------------------------------HHHHhhhheeecceeHHHHHHHHHHHHHHHHHHHHHH
Confidence 111122 344787655433 4446666555444
Q ss_pred HHHHHHHhhhccccccchHHHHHhHH-HHHHHHHhh---------ccCCCCccccCCCCCCccchhhHHHHHHHHHHHHH
Q 001010 974 TAYVLSVMYLDGVKLGDVQATISGVF-TAAFFLFIS---------HARPLPTLSAARPHPNIFCSYVFLSLMGQFAIHLF 1043 (1191)
Q Consensus 974 ~~~s~svly~~g~~~~d~Q~~~~~~l-~~~~~~~~s---------~~~p~~~Ls~~rP~~~if~~~~~~si~~Q~~i~~~ 1043 (1191)
--|.....|....-+.++++++.+++ ++++.+.++ ..--.+.|.+.-+....|+++.+....+...+|.+
T Consensus 875 fwy~f~~gfSgq~~yd~~~l~lyNv~FTSlPvi~lGvfdqDvsa~~~l~~P~LY~~g~~~~~f~~~~f~~~~~~g~~~sl 954 (1151)
T KOG0206|consen 875 FWYQFFNGFSGQTLYDDWYLSLYNVLFTSLPVIVLGVFDQDVSAETLLRFPELYQRGQLNLLFNWKRFWGWMLDGFYQSL 954 (1151)
T ss_pred HHhhhcCCCCCCccccceEEEEEeEEeecCchhheeecccCCCHHHHhhCCcchhhhhhccccchHHHHHHHHHHHHhhe
Confidence 44444444444444555666655544 455555543 23345677788888899999999999999998887
Q ss_pred HHHHH
Q 001010 1044 FLISS 1048 (1191)
Q Consensus 1044 ~l~~~ 1048 (1191)
.+++.
T Consensus 955 i~Ff~ 959 (1151)
T KOG0206|consen 955 VIFFL 959 (1151)
T ss_pred eeeee
Confidence 76654
|
|
| >COG2216 KdpB High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.3e-53 Score=472.96 Aligned_cols=452 Identities=22% Similarity=0.259 Sum_probs=342.3
Q ss_pred HHHHHhhccCCceEEEEEC-CEEEEEecCCCCCCcEEEEcCCCCCCCCCceeeeeEEEEecceeeecccccCCCCceecc
Q 001010 244 LTEIRRVRVDNQTIMVHRC-GKWVKLAGTDLVPGDVVSIGRSSGQTGEDKSVPADMLILGGSAIVNEAILTGESTPQWKV 322 (1191)
Q Consensus 244 ~~~l~~m~~~~~~v~V~R~-g~~~~I~s~eLvpGDIV~l~~g~gd~~~~~~VPaD~iLl~G~~~VdES~LTGES~Pv~K~ 322 (1191)
...||+.+. ...++++++ |.++.+++.+|..||+|.|..| +.||+||.+++|.+.||||.+||||.||.|+
T Consensus 94 AdsLr~~~~-~~~A~~l~~~g~~~~v~st~Lk~gdiV~V~ag-------e~IP~DGeVIeG~asVdESAITGESaPVire 165 (681)
T COG2216 94 ADSLRKTKT-ETIARLLRADGSIEMVPATELKKGDIVLVEAG-------EIIPSDGEVIEGVASVDESAITGESAPVIRE 165 (681)
T ss_pred HHHHHHHHH-HHHHHHhcCCCCeeeccccccccCCEEEEecC-------CCccCCCeEEeeeeecchhhccCCCcceeec
Confidence 345555443 234556665 8999999999999999999987 8999999999999999999999999999998
Q ss_pred cccCCCCccccccccCCCeeEeeceEEeecCCCCCCCCCCCCCcEEEEEEEecccchhhHHHHHhccccccccchhhhHH
Q 001010 323 SIMGRETGEKLSARRDKSHVLFGGTKILQHTPDKTFPLKTPDGGCLAVVLRTGFETSQGKLMRTILFSTERVTANSWESG 402 (1191)
Q Consensus 323 ~i~~~~~~~~~~~~~~k~~~lfaGT~vlq~~~~~~~~~~~~~g~~~~vV~~TG~~T~~Gkl~r~i~~~~~~~~~~~~~~~ 402 (1191)
+- +| .+-+-+||+++ +++.+..++....+|...|++..+.-.+.+++||.....
T Consensus 166 sG------------gD-~ssVtGgT~v~-------------SD~l~irita~pG~sFlDrMI~LVEgA~R~KTPNEIAL~ 219 (681)
T COG2216 166 SG------------GD-FSSVTGGTRVL-------------SDWLKIRITANPGETFLDRMIALVEGAERQKTPNEIALT 219 (681)
T ss_pred cC------------CC-cccccCCcEEe-------------eeeEEEEEEcCCCccHHHHHHHHhhchhccCChhHHHHH
Confidence 62 12 34488999999 889999999999999999999999888888888876555
Q ss_pred HHHHHHHHHHH--HhhheeeeecccCCCcchhHHHHHHHHhhhhccCCCcchHHHHHHHHHHHHHHhcCccccCCCcccc
Q 001010 403 LFILFLVVFAV--IAAGYVLKKGMEDPTRSKYKLFLSCSLIITSVIPPELPMELSIAVNTSLIALARRGIFCTEPFRIPF 480 (1191)
Q Consensus 403 ~fi~~lli~ai--i~~~~~~~~~~~~~~~~~~~~~l~~i~iit~~vP~~LP~~lslav~~s~~~L~k~~I~~~~p~~i~~ 480 (1191)
.++..|.++-+ ++..|.+..... +... .+...+.++++.+|-....-++.-=..++.|+.+.+++.++..++|.
T Consensus 220 iLL~~LTliFL~~~~Tl~p~a~y~~--g~~~--~i~~LiALlV~LIPTTIGgLLsAIGIAGMdRv~~~NViA~SGRAVEa 295 (681)
T COG2216 220 ILLSGLTLIFLLAVATLYPFAIYSG--GGAA--SVTVLVALLVCLIPTTIGGLLSAIGIAGMDRVTQFNVIATSGRAVEA 295 (681)
T ss_pred HHHHHHHHHHHHHHHhhhhHHHHcC--CCCc--CHHHHHHHHHHHhcccHHHHHHHhhhhhhhHhhhhceeecCcchhhh
Confidence 44433322222 222222211110 1111 12334567778899888877776667789999999999999999999
Q ss_pred cCCccEEEecccccccCCceEEEEEeecCCCccccccCCCchHHHHHHhhccceEEeCCcccCChHHHHHHhcccccccC
Q 001010 481 AGKVDMCCFDKTGTLTSDDMEFRGVVGLSNAELEDDMTKVPVRTQEILASCHALVFVDNKLVGDPLEKAALKGIDWSYKS 560 (1191)
Q Consensus 481 ~G~vd~icfDKTGTLT~~~l~v~gv~~~~~~~~~~~~~~~~~~~~~~la~chsl~~~~~~~~GdPle~all~~~~~~~~~ 560 (1191)
+|.||++..|||||+|-|+-.-..+++.++.. .+...-.|.-.|+ .|..+-|-.+-.- -+..+..+..
T Consensus 296 aGDvdtliLDKTGTIT~GnR~A~~f~p~~gv~---------~~~la~aa~lsSl--~DeTpEGrSIV~L-A~~~~~~~~~ 363 (681)
T COG2216 296 AGDVDTLLLDKTGTITLGNRQASEFIPVPGVS---------EEELADAAQLASL--ADETPEGRSIVEL-AKKLGIELRE 363 (681)
T ss_pred cCCccEEEecccCceeecchhhhheecCCCCC---------HHHHHHHHHHhhh--ccCCCCcccHHHH-HHHhccCCCc
Confidence 99999999999999999987777777665511 1111111222222 3433444433211 1111111111
Q ss_pred CCccccCCCCCCcccEEEEecCCCCCCcEEEEEEeCCeEEEEEeCcHHHHHHhcc----CChHHHHHHHHHHHHhcCeee
Q 001010 561 DEKAMPKRGGGNAVQIVQRHHFASHLKRMSVVVRVQEEFFAFVKGAPETIQDRLT----DLPSSYIETYKKYTHQGSRVL 636 (1191)
Q Consensus 561 ~~~~~~~~~~~~~~~il~~~~Fss~~krmsvvv~~~~~~~~~~KGapE~I~~~~~----~~p~~~~~~~~~~a~~G~RVL 636 (1191)
++. . ..-.-.||+.+.| ||-+-..++ .-+.|||.+.+++... ++|++.+..+++-++.|-..|
T Consensus 364 ~~~--------~--~~~~fvpFtA~TR-mSGvd~~~~--~~irKGA~dai~~~v~~~~g~~p~~l~~~~~~vs~~GGTPL 430 (681)
T COG2216 364 DDL--------Q--SHAEFVPFTAQTR-MSGVDLPGG--REIRKGAVDAIRRYVRERGGHIPEDLDAAVDEVSRLGGTPL 430 (681)
T ss_pred ccc--------c--ccceeeecceecc-cccccCCCC--ceeecccHHHHHHHHHhcCCCCCHHHHHHHHHHHhcCCCce
Confidence 100 0 0124568988764 554433333 3678999999998874 589999999999999999999
Q ss_pred eEEEEeCCCCChhhhhhccccccccCeEEeeeecccCcCCchhHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCC
Q 001010 637 ALAFKSLPDMTVSDARSLHRDEVENGLTFAGFAVFNCPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTK 716 (1191)
Q Consensus 637 alA~k~l~~~~~~~~~~~~r~~~E~dL~flG~l~~~d~lK~da~~~I~~L~~agi~vvMiTGDn~~TA~~VA~~~gI~~~ 716 (1191)
+++. |..++|.+.++|-+||+.+|-+.+||+.|||++|+||||+.||..||+|.|+.
T Consensus 431 ~V~~---------------------~~~~~GVI~LkDivK~Gi~ERf~elR~MgIkTvM~TGDN~~TAa~IA~EAGVD-- 487 (681)
T COG2216 431 VVVE---------------------NGRILGVIYLKDIVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAEAGVD-- 487 (681)
T ss_pred EEEE---------------------CCEEEEEEEehhhcchhHHHHHHHHHhcCCeEEEEeCCCHHHHHHHHHHhCch--
Confidence 9883 67899999999999999999999999999999999999999999999999984
Q ss_pred CcEEEeecCCCceeeecCCCccccccCChHHHhcccccceEEEechhhhhhcchHHHHhhcCcceEEeecChhhHHHHHH
Q 001010 717 PVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLTDAHDLCIGGDCFEMLQQTSAVLRVIPYVKVFARVAPEQKELILT 796 (1191)
Q Consensus 717 ~~~il~~~~~~~~~~w~~~d~~~~~~~~~~~~~~~~~~~~l~itG~~l~~l~~~~~~~~~l~~~~VfAR~sP~qK~~iV~ 796 (1191)
...|.++||+|.++|+
T Consensus 488 ----------------------------------------------------------------dfiAeatPEdK~~~I~ 503 (681)
T COG2216 488 ----------------------------------------------------------------DFIAEATPEDKLALIR 503 (681)
T ss_pred ----------------------------------------------------------------hhhhcCChHHHHHHHH
Confidence 2678999999999999
Q ss_pred HHhHcCCEEEEEcCCccCHHHHhhCCceEEeccCCCccccccCCcccccc
Q 001010 797 TFKAVGRMTLMCGDGTNDVGALKQAHVGVALLNAVPPTQSGNSSSEASKD 846 (1191)
Q Consensus 797 ~Lq~~g~~V~m~GDG~ND~~ALk~AdVGIAl~~~~~e~~~~asdi~~~~~ 846 (1191)
.-|..|+.|+|||||+||+|||.|||||+||.+ ++..+||++.++-.+.
T Consensus 504 ~eQ~~grlVAMtGDGTNDAPALAqAdVg~AMNs-GTqAAkEAaNMVDLDS 552 (681)
T COG2216 504 QEQAEGRLVAMTGDGTNDAPALAQADVGVAMNS-GTQAAKEAANMVDLDS 552 (681)
T ss_pred HHHhcCcEEEEcCCCCCcchhhhhcchhhhhcc-ccHHHHHhhcccccCC
Confidence 999999999999999999999999999999985 5666788877776554
|
|
| >PF00122 E1-E2_ATPase: E1-E2 ATPase p-type cation-transporting ATPase superfamily signature H+-transporting ATPase (proton pump) signature sodium/potassium-transporting ATPase signature; InterPro: IPR008250 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane | Back alignment and domain information |
|---|
Probab=99.97 E-value=1e-30 Score=287.37 Aligned_cols=219 Identities=25% Similarity=0.446 Sum_probs=170.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcc-CCc-eEEEEECCEEEEEecCCCCCCcEEEEcCCCCCCCCCceeeeeEEEEe-c
Q 001010 227 FMLFMFESTMAKSRLKTLTEIRRVRV-DNQ-TIMVHRCGKWVKLAGTDLVPGDVVSIGRSSGQTGEDKSVPADMLILG-G 303 (1191)
Q Consensus 227 ~m~vv~~~~~~~~~~r~~~~l~~m~~-~~~-~v~V~R~g~~~~I~s~eLvpGDIV~l~~g~gd~~~~~~VPaD~iLl~-G 303 (1191)
+++++......+++.|+.+.++++.. .+. .++|+|||+|++++++||+|||+|.+++| +.+||||+|++ |
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~r~~~~~~i~~~~L~~GDiI~l~~g-------~~vPaD~~ll~~g 76 (230)
T PF00122_consen 4 FLILLSNIIEIWQEYRSKKQLKKLNNLNPQKKVTVIRDGRWQKIPSSELVPGDIIILKAG-------DIVPADGILLESG 76 (230)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHCTTSSSEEEEEEETTEEEEEEGGGT-TTSEEEEETT-------EBESSEEEEEESS
T ss_pred EEhHHHHHHHHHHHHHHHHHHHHHhccCCCccEEEEeccccccchHhhccceeeeecccc-------cccccCccceecc
Confidence 33334444445555566666666544 234 49999999999999999999999999987 89999999999 9
Q ss_pred ceeeecccccCCCCceecccccCCCCccccccccCCCeeEeeceEEeecCCCCCCCCCCCCCcEEEEEEEecccchhhHH
Q 001010 304 SAIVNEAILTGESTPQWKVSIMGRETGEKLSARRDKSHVLFGGTKILQHTPDKTFPLKTPDGGCLAVVLRTGFETSQGKL 383 (1191)
Q Consensus 304 ~~~VdES~LTGES~Pv~K~~i~~~~~~~~~~~~~~k~~~lfaGT~vlq~~~~~~~~~~~~~g~~~~vV~~TG~~T~~Gkl 383 (1191)
.+.||||.||||+.|+.|.+. ..+.++.+|+||.+. +|.+.++|++||.+|..|++
T Consensus 77 ~~~vd~s~ltGes~pv~k~~~-----------~~~~~~~i~~Gs~v~-------------~g~~~~~Vi~tG~~t~~~~~ 132 (230)
T PF00122_consen 77 SAYVDESALTGESEPVKKTPL-----------PLNPGNIIFAGSIVV-------------SGWGIGVVIATGSDTKLGRI 132 (230)
T ss_dssp EEEEECHHHHSBSSEEEESSS-----------CCCTTTEE-TTEEEE-------------EEEEEEEEEE-GGGSHHHHH
T ss_pred ccccccccccccccccccccc-----------cccccchhhcccccc-------------ccccccccceeeeccccccc
Confidence 999999999999999999864 224699999999999 79999999999999999999
Q ss_pred HHHhccccccccchhhhHHHHHHHHH----HHHHHhhheeeeecccCCCcchhHHHHHHHHhhhhccCCCcchHHHHHHH
Q 001010 384 MRTILFSTERVTANSWESGLFILFLV----VFAVIAAGYVLKKGMEDPTRSKYKLFLSCSLIITSVIPPELPMELSIAVN 459 (1191)
Q Consensus 384 ~r~i~~~~~~~~~~~~~~~~fi~~ll----i~aii~~~~~~~~~~~~~~~~~~~~~l~~i~iit~~vP~~LP~~lslav~ 459 (1191)
.+.+..+..+.++.++....+...++ +++++...+++.. +...++...+..++.+++.++|++||++++++..
T Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~i~~l~~~~P~~l~~~~~~~~~ 209 (230)
T PF00122_consen 133 LQLVSKSESKKSPLERKLNKIAKILIIIILAIAILVFIIWFFN---DSGISFFKSFLFAISLLIVLIPCALPLALPLSLA 209 (230)
T ss_dssp HHHHHTSCSS-THHHHHHHHHHHHHHHHHHHHHHHHHHHCHTG---STTCHCCHHHHHHHHHHHHHS-TTHHHHHHHHHH
T ss_pred ccccccccccchhhhhhhHHHHHHHHhcccccchhhhccceec---ccccccccccccccceeeeecccceeehHHHHHH
Confidence 99998777665666665554443333 2232222222221 2356778889999999999999999999999999
Q ss_pred HHHHHHHhcCccccCCCccc
Q 001010 460 TSLIALARRGIFCTEPFRIP 479 (1191)
Q Consensus 460 ~s~~~L~k~~I~~~~p~~i~ 479 (1191)
.+..+|+++||+|+++.++|
T Consensus 210 ~~~~~~~~~~i~v~~~~a~E 229 (230)
T PF00122_consen 210 IAARRLAKNGIIVKNLSALE 229 (230)
T ss_dssp HHHHHHHHTTEEESSTTHHH
T ss_pred HHHHHHHHCCEEEeCccccc
Confidence 99999999999999998876
|
ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the actuator (A) domain, and some transmembrane helices found in P-type ATPases []. It contains the TGES-loop which is essential for the metal ion binding which results in tight association between the A and P (phosphorylation) domains []. It does not contain the phosphorylation site. It is thought that the large movement of the actuator domain, which is transmitted to the transmembrane helices, is essential to the long distance coupling between formation/decomposition of the acyl phosphate in the cytoplasmic P-domain and the changes in the ion-binding sites buried deep in the membranous region []. This domain has a modulatory effect on the phosphoenzyme processing steps through its nucleotide binding [],[]. P-type (or E1-E2-type) ATPases that form an aspartyl phosphate intermediate in the course of ATP hydrolysis, can be divided into 4 major groups []: (1) Ca2+-transporting ATPases; (2) Na+/K+- and gastric H+/K+-transporting ATPases; (3) plasma membrane H+-transporting ATPases (proton pumps) of plants, fungi and lower eukaryotes; and (4) all bacterial P-type ATPases, except the g2+-ATPase of Salmonella typhimurium, which is more similar to the eukaryotic sequences. However, great variety of sequence analysis methods results in diversity of classification. More information about this protein can be found at Protein of the Month: ATP Synthases [].; GO: 0000166 nucleotide binding, 0046872 metal ion binding; PDB: 2XZB_A 1MHS_B 3TLM_A 3A3Y_A 2ZXE_A 3NAL_A 3NAM_A 3NAN_A 2YJ6_B 2IYE_A .... |
| >PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase) | Back alignment and domain information |
|---|
Probab=99.90 E-value=2.3e-24 Score=233.48 Aligned_cols=211 Identities=32% Similarity=0.403 Sum_probs=148.5
Q ss_pred ccEEEecccccccCCceEEEEEeecCCCccccccCCCchHHHHHHhhccceEEeCCcccCChHHHHHHhcccccccCCCc
Q 001010 484 VDMCCFDKTGTLTSDDMEFRGVVGLSNAELEDDMTKVPVRTQEILASCHALVFVDNKLVGDPLEKAALKGIDWSYKSDEK 563 (1191)
Q Consensus 484 vd~icfDKTGTLT~~~l~v~gv~~~~~~~~~~~~~~~~~~~~~~la~chsl~~~~~~~~GdPle~all~~~~~~~~~~~~ 563 (1191)
|+++|||||||||++++.+ .. . ....++..+.... ....+|+..++.....-.... .
T Consensus 1 i~~i~fDktGTLt~~~~~v---~~------------~--~~~~~~~~~~~~~----~~s~~p~~~~~~~~~~~~~~~-~- 57 (215)
T PF00702_consen 1 IDAICFDKTGTLTQGKMSV---AP------------P--SNEAALAIAAALE----QGSEHPIGKAIVEFAKNHQWS-K- 57 (215)
T ss_dssp ESEEEEECCTTTBESHHEE---ES------------C--SHHHHHHHHHHHH----CTSTSHHHHHHHHHHHHHHHH-S-
T ss_pred CeEEEEecCCCcccCeEEE---Ee------------c--cHHHHHHHHHHhh----hcCCCcchhhhhhhhhhccch-h-
Confidence 6899999999999999999 10 0 1112222222222 224688888888765421100 0
Q ss_pred cccCCCCCCcccEEEEecCCCCCCcEEEEEEeCCeEEEEEeCcHHHHHHhccCChHHHHHHHHHHHHhcCeeeeEEEEeC
Q 001010 564 AMPKRGGGNAVQIVQRHHFASHLKRMSVVVRVQEEFFAFVKGAPETIQDRLTDLPSSYIETYKKYTHQGSRVLALAFKSL 643 (1191)
Q Consensus 564 ~~~~~~~~~~~~il~~~~Fss~~krmsvvv~~~~~~~~~~KGapE~I~~~~~~~p~~~~~~~~~~a~~G~RVLalA~k~l 643 (1191)
+ ..-.. ....+ +......+. +. |+++.+.+..... ............+|.+++.++.
T Consensus 58 -----~----~~~~~-----~~~~~-~~~~~~~~~---~~-g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~--- 114 (215)
T PF00702_consen 58 -----S----LESFS-----EFIGR-GISGDVDGI---YL-GSPEWIHELGIRV-ISPDLVEEIQESQGRTVIVLAV--- 114 (215)
T ss_dssp -----C----CEEEE-----EETTT-EEEEEEHCH---EE-HHHHHHHHHHHHH-HHHHHHHHHHHHHHHHCEEEEE---
T ss_pred -----h----hhhhe-----eeeec-ccccccccc---cc-ccchhhhhccccc-cccchhhhHHHhhCCcccceee---
Confidence 0 00011 11111 111122222 22 9999998876432 1222233344666666666653
Q ss_pred CCCChhhhhhccccccccCeEEeeeecccCcCCchhHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCcEEEee
Q 001010 644 PDMTVSDARSLHRDEVENGLTFAGFAVFNCPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLILCP 723 (1191)
Q Consensus 644 ~~~~~~~~~~~~r~~~E~dL~flG~l~~~d~lK~da~~~I~~L~~agi~vvMiTGDn~~TA~~VA~~~gI~~~~~~il~~ 723 (1191)
++.++|.+.+.|++||+++++|++|+++|++++|+|||+..+|.++|+++||.+
T Consensus 115 ------------------~~~~~~~~~~~d~~~~~~~~~l~~L~~~Gi~~~i~TGD~~~~a~~~~~~lgi~~-------- 168 (215)
T PF00702_consen 115 ------------------NLIFLGLFGLRDPLRPGAKEALQELKEAGIKVAILTGDNESTASAIAKQLGIFD-------- 168 (215)
T ss_dssp ------------------SHEEEEEEEEEEEBHTTHHHHHHHHHHTTEEEEEEESSEHHHHHHHHHHTTSCS--------
T ss_pred ------------------cCeEEEEEeecCcchhhhhhhhhhhhccCcceeeeecccccccccccccccccc--------
Confidence 788999999999999999999999999999999999999999999999999931
Q ss_pred cCCCceeeecCCCccccccCChHHHhcccccceEEEechhhhhhcchHHHHhhcCcceEEeec--ChhhH--HHHHHHHh
Q 001010 724 VKNGKVYEWVSPDETEKIQYSEKEVEGLTDAHDLCIGGDCFEMLQQTSAVLRVIPYVKVFARV--APEQK--ELILTTFK 799 (1191)
Q Consensus 724 ~~~~~~~~w~~~d~~~~~~~~~~~~~~~~~~~~l~itG~~l~~l~~~~~~~~~l~~~~VfAR~--sP~qK--~~iV~~Lq 799 (1191)
..|||++ +|++| .++++.||
T Consensus 169 --------------------------------------------------------~~v~a~~~~kP~~k~~~~~i~~l~ 192 (215)
T PF00702_consen 169 --------------------------------------------------------SIVFARVIGKPEPKIFLRIIKELQ 192 (215)
T ss_dssp --------------------------------------------------------EEEEESHETTTHHHHHHHHHHHHT
T ss_pred --------------------------------------------------------ccccccccccccchhHHHHHHHHh
Confidence 1499999 99999 99999999
Q ss_pred HcCCEEEEEcCCccCHHHHhhCC
Q 001010 800 AVGRMTLMCGDGTNDVGALKQAH 822 (1191)
Q Consensus 800 ~~g~~V~m~GDG~ND~~ALk~Ad 822 (1191)
..++.|+|+|||.||++|||+||
T Consensus 193 ~~~~~v~~vGDg~nD~~al~~Ag 215 (215)
T PF00702_consen 193 VKPGEVAMVGDGVNDAPALKAAG 215 (215)
T ss_dssp CTGGGEEEEESSGGHHHHHHHSS
T ss_pred cCCCEEEEEccCHHHHHHHHhCc
Confidence 77779999999999999999997
|
This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J .... |
| >COG4087 Soluble P-type ATPase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.37 E-value=2.1e-12 Score=122.93 Aligned_cols=117 Identities=23% Similarity=0.312 Sum_probs=99.3
Q ss_pred EEeeeecccCcCCchhHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCcEEEeecCCCceeeecCCCccccccC
Q 001010 664 TFAGFAVFNCPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQY 743 (1191)
Q Consensus 664 ~flG~l~~~d~lK~da~~~I~~L~~agi~vvMiTGDn~~TA~~VA~~~gI~~~~~~il~~~~~~~~~~w~~~d~~~~~~~ 743 (1191)
...+.+.---.|=++++++|++|++. +++++.|||..-+-...|+-+||..
T Consensus 20 ~v~~tiatgGklf~ev~e~iqeL~d~-V~i~IASgDr~gsl~~lae~~gi~~---------------------------- 70 (152)
T COG4087 20 KVLYTIATGGKLFSEVSETIQELHDM-VDIYIASGDRKGSLVQLAEFVGIPV---------------------------- 70 (152)
T ss_pred eEEEEEccCcEEcHhhHHHHHHHHHh-heEEEecCCcchHHHHHHHHcCCce----------------------------
Confidence 34556666677889999999999999 9999999999999999999999841
Q ss_pred ChHHHhcccccceEEEechhhhhhcchHHHHhhcCcceEEeecChhhHHHHHHHHhHcCCEEEEEcCCccCHHHHhhCCc
Q 001010 744 SEKEVEGLTDAHDLCIGGDCFEMLQQTSAVLRVIPYVKVFARVAPEQKELILTTFKAVGRMTLMCGDGTNDVGALKQAHV 823 (1191)
Q Consensus 744 ~~~~~~~~~~~~~l~itG~~l~~l~~~~~~~~~l~~~~VfAR~sP~qK~~iV~~Lq~~g~~V~m~GDG~ND~~ALk~AdV 823 (1191)
-+|||...|+.|..+++.|++.++.|.|+|||+||.+||+.||+
T Consensus 71 ------------------------------------~rv~a~a~~e~K~~ii~eLkk~~~k~vmVGnGaND~laLr~ADl 114 (152)
T COG4087 71 ------------------------------------ERVFAGADPEMKAKIIRELKKRYEKVVMVGNGANDILALREADL 114 (152)
T ss_pred ------------------------------------eeeecccCHHHHHHHHHHhcCCCcEEEEecCCcchHHHhhhccc
Confidence 15999999999999999999999999999999999999999999
Q ss_pred eEEeccC--CCccccccCCccccc
Q 001010 824 GVALLNA--VPPTQSGNSSSEASK 845 (1191)
Q Consensus 824 GIAl~~~--~~e~~~~asdi~~~~ 845 (1191)
||..... .++-.-+++|+++.+
T Consensus 115 GI~tiq~e~v~~r~l~~ADvvik~ 138 (152)
T COG4087 115 GICTIQQEGVPERLLLTADVVLKE 138 (152)
T ss_pred ceEEeccCCcchHHHhhchhhhhh
Confidence 9877643 223344677777644
|
|
| >PF13246 Hydrolase_like2: Putative hydrolase of sodium-potassium ATPase alpha subunit | Back alignment and domain information |
|---|
Probab=99.13 E-value=5.1e-11 Score=111.35 Aligned_cols=85 Identities=36% Similarity=0.463 Sum_probs=62.4
Q ss_pred hhccceEEeCC------cccCChHHHHHHhcccccccCCCccccCCCCCCcccEEEEecCCCCCCcEEEEEEeCCeEEEE
Q 001010 529 ASCHALVFVDN------KLVGDPLEKAALKGIDWSYKSDEKAMPKRGGGNAVQIVQRHHFASHLKRMSVVVRVQEEFFAF 602 (1191)
Q Consensus 529 a~chsl~~~~~------~~~GdPle~all~~~~~~~~~~~~~~~~~~~~~~~~il~~~~Fss~~krmsvvv~~~~~~~~~ 602 (1191)
+.||+.....+ +.+|||.|.|+++++.+.-.... .......+++++.+||+|++|||+|+++.++.+.++
T Consensus 1 ~LCn~a~~~~~~~~~~~~~~G~ptE~ALl~~~~~~g~~~~----~~~~~~~~~~~~~~pF~S~rK~msvv~~~~~~~~~~ 76 (91)
T PF13246_consen 1 ALCNDAEIEYDDESKTEEIIGDPTEKALLRFAKKLGVGID----IKEIRSKYKIVAEIPFDSERKRMSVVVRNDGKYILY 76 (91)
T ss_pred CCccccEeecCCCCccccccCCcCHHHHHHHHHHcCCCCc----HHHHHhhcceeEEEccCcccceeEEEEeCCCEEEEE
Confidence 46777664211 28999999999998764311111 111235688999999999999999999943457779
Q ss_pred EeCcHHHHHHhccCC
Q 001010 603 VKGAPETIQDRLTDL 617 (1191)
Q Consensus 603 ~KGapE~I~~~~~~~ 617 (1191)
+|||||.|+++|+.+
T Consensus 77 ~KGA~e~il~~Ct~i 91 (91)
T PF13246_consen 77 VKGAPEVILDRCTHI 91 (91)
T ss_pred cCCChHHHHHhcCCC
Confidence 999999999999753
|
|
| >TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein | Back alignment and domain information |
|---|
Probab=98.70 E-value=4.2e-08 Score=105.85 Aligned_cols=114 Identities=16% Similarity=0.121 Sum_probs=86.0
Q ss_pred cCCchhHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCC--CcEEEeecCCCceeeecCCCccccccCChHHHhcc
Q 001010 674 PIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTK--PVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGL 751 (1191)
Q Consensus 674 ~lK~da~~~I~~L~~agi~vvMiTGDn~~TA~~VA~~~gI~~~--~~~il~~~~~~~~~~w~~~d~~~~~~~~~~~~~~~ 751 (1191)
++.|++.+.|+.|++.+ +++++||-....+..+++++|+..- +.+..+ +
T Consensus 68 ~l~pga~ell~~lk~~~-~~~IVS~~~~~~~~~il~~lgi~~~~an~l~~~---~------------------------- 118 (203)
T TIGR02137 68 KPLEGAVEFVDWLRERF-QVVILSDTFYEFSQPLMRQLGFPTLLCHKLEID---D------------------------- 118 (203)
T ss_pred CCCccHHHHHHHHHhCC-eEEEEeCChHHHHHHHHHHcCCchhhceeeEEe---c-------------------------
Confidence 68999999999999975 9999999999999999999998410 000000 0
Q ss_pred cccceEEEechhhhhhcchHHHHhhcCcceEEeecChhhHHHHHHHHhHcCCEEEEEcCCccCHHHHhhCCceEEeccCC
Q 001010 752 TDAHDLCIGGDCFEMLQQTSAVLRVIPYVKVFARVAPEQKELILTTFKAVGRMTLMCGDGTNDVGALKQAHVGVALLNAV 831 (1191)
Q Consensus 752 ~~~~~l~itG~~l~~l~~~~~~~~~l~~~~VfAR~sP~qK~~iV~~Lq~~g~~V~m~GDG~ND~~ALk~AdVGIAl~~~~ 831 (1191)
+=.+||.. + ..|+.|..+++.+++.|..+.|+|||.||.+|++.|++||++. +.
T Consensus 119 ----~g~~tG~~------------------~---~~~~~K~~~l~~l~~~~~~~v~vGDs~nDl~ml~~Ag~~ia~~-ak 172 (203)
T TIGR02137 119 ----SDRVVGYQ------------------L---RQKDPKRQSVIAFKSLYYRVIAAGDSYNDTTMLSEAHAGILFH-AP 172 (203)
T ss_pred ----CCeeECee------------------e---cCcchHHHHHHHHHhhCCCEEEEeCCHHHHHHHHhCCCCEEec-CC
Confidence 00122321 1 3477899999999988889999999999999999999999998 44
Q ss_pred CccccccCCcc
Q 001010 832 PPTQSGNSSSE 842 (1191)
Q Consensus 832 ~e~~~~asdi~ 842 (1191)
+.+++.+.+..
T Consensus 173 ~~~~~~~~~~~ 183 (203)
T TIGR02137 173 ENVIREFPQFP 183 (203)
T ss_pred HHHHHhCCCCC
Confidence 54444444433
|
This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338). |
| >PRK10513 sugar phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.49 E-value=1.1e-06 Score=99.13 Aligned_cols=58 Identities=28% Similarity=0.342 Sum_probs=47.2
Q ss_pred hHHHHHHHHhHc-C---CEEEEEcCCccCHHHHhhCCceEEeccCCCccccccCCccccccc
Q 001010 790 QKELILTTFKAV-G---RMTLMCGDGTNDVGALKQAHVGVALLNAVPPTQSGNSSSEASKDE 847 (1191)
Q Consensus 790 qK~~iV~~Lq~~-g---~~V~m~GDG~ND~~ALk~AdVGIAl~~~~~e~~~~asdi~~~~~~ 847 (1191)
.|..-++.|.+. | ..|+++|||.||.+||+.|++||||+|+.+++++.+..++..+++
T Consensus 196 sKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm~NA~~~vK~~A~~vt~~n~~ 257 (270)
T PRK10513 196 NKGTGVKSLAEHLGIKPEEVMAIGDQENDIAMIEYAGVGVAMGNAIPSVKEVAQFVTKSNLE 257 (270)
T ss_pred ChHHHHHHHHHHhCCCHHHEEEECCchhhHHHHHhCCceEEecCccHHHHHhcCeeccCCCc
Confidence 688888887653 4 469999999999999999999999999888877766666655553
|
|
| >COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.49 E-value=1.6e-06 Score=97.72 Aligned_cols=41 Identities=12% Similarity=0.236 Sum_probs=39.4
Q ss_pred CCchhHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCC
Q 001010 675 IREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVT 715 (1191)
Q Consensus 675 lK~da~~~I~~L~~agi~vvMiTGDn~~TA~~VA~~~gI~~ 715 (1191)
+.+.++++|+++++.|++++++||.....+..+.+++++..
T Consensus 21 i~~~~~~al~~~~~~g~~v~iaTGR~~~~~~~~~~~l~~~~ 61 (264)
T COG0561 21 ISPETKEALARLREKGVKVVLATGRPLPDVLSILEELGLDG 61 (264)
T ss_pred cCHHHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHcCCCc
Confidence 89999999999999999999999999999999999999963
|
|
| >PF00690 Cation_ATPase_N: Cation transporter/ATPase, N-terminus; InterPro: IPR004014 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane | Back alignment and domain information |
|---|
Probab=98.47 E-value=3.5e-07 Score=80.99 Aligned_cols=63 Identities=11% Similarity=0.224 Sum_probs=54.0
Q ss_pred ChhhhHHhhhh-cCCCCCHHHHHHHHhccCCCccCC-CCCcHHHHHHHHhhhHHHHHHHHHHHHH
Q 001010 151 PTKETFGYYLK-CTGHSTEAKIAVATEKWGRNVFEY-PQPTFQKLMKENCMEPFFVFQVFCVGLW 213 (1191)
Q Consensus 151 ~~~~~~~~~~~-~~g~ls~~e~~~~~~~yG~N~i~i-~~~s~~~ll~~~~~~pf~vfqi~~v~lw 213 (1191)
+.++.++.+.+ ...|++++|+++|+++||+|+++. +.++++++|++++.+||.++++++.+++
T Consensus 5 ~~~~v~~~l~t~~~~GLs~~ev~~r~~~~G~N~l~~~~~~s~~~~~~~~f~~~~~~lL~~aailS 69 (69)
T PF00690_consen 5 SVEEVLKRLNTSSSQGLSSEEVEERRKKYGPNELPEPKKKSLWRIFLKQFKNPFIILLLIAAILS 69 (69)
T ss_dssp SHHHHHHHHTTBTSSBBTHHHHHHHHHHHSSSSTTTTTSSSHHHHHHHHTTSHHHHHHHHHHHHH
T ss_pred CHHHHHHHHCcCCCCCCCHHHHHHHHHhcccccccccccCcHHHHHHHHHHhHHHHHHHHHHHHC
Confidence 46778888874 457889999999999999999965 4579999999999999999999887763
|
ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the conserved N-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+ (3.6.3.6 from EC), Na+ (3.6.3.7 from EC), Ca2+ (3.6.3.8 from EC), Na+/K+ (3.6.3.9 from EC), and H+/K+ (3.6.3.10 from EC). In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. In gastric H+/K+-ATPases, this domain undergoes reversible sequential phosphorylation inducing conformational changes that may be important for regulating the function of these ATPases [, ]. More information about this protein can be found at Protein of the Month: ATP Synthases [].; PDB: 3KDP_C 3N2F_A 3B8E_A 3N23_A 2XZB_A 1MHS_B 3A3Y_A 2ZXE_A 3B8C_A 3B9B_A .... |
| >COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.44 E-value=7.7e-07 Score=96.57 Aligned_cols=107 Identities=21% Similarity=0.270 Sum_probs=82.6
Q ss_pred CcCCchhHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCcEEEeecCCCceeeecCCCccccccCChHHHhccc
Q 001010 673 CPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLT 752 (1191)
Q Consensus 673 d~lK~da~~~I~~L~~agi~vvMiTGDn~~TA~~VA~~~gI~~~~~~il~~~~~~~~~~w~~~d~~~~~~~~~~~~~~~~ 752 (1191)
.+++|++.+.++.++++|++|++|||-...-+..+|+++|+...-...+. .
T Consensus 76 ~~l~~ga~elv~~lk~~G~~v~iiSgg~~~lv~~ia~~lg~d~~~an~l~-----------------------------~ 126 (212)
T COG0560 76 LRLTPGAEELVAALKAAGAKVVIISGGFTFLVEPIAERLGIDYVVANELE-----------------------------I 126 (212)
T ss_pred CcCCccHHHHHHHHHHCCCEEEEEcCChHHHHHHHHHHhCCchheeeEEE-----------------------------E
Confidence 68999999999999999999999999999999999999999621110110 0
Q ss_pred ccceEEEechhhhhhcchHHHHhhcCcceEEeecC-hhhHHHHHHHHhH-cCC---EEEEEcCCccCHHHHhhCCceEEe
Q 001010 753 DAHDLCIGGDCFEMLQQTSAVLRVIPYVKVFARVA-PEQKELILTTFKA-VGR---MTLMCGDGTNDVGALKQAHVGVAL 827 (1191)
Q Consensus 753 ~~~~l~itG~~l~~l~~~~~~~~~l~~~~VfAR~s-P~qK~~iV~~Lq~-~g~---~V~m~GDG~ND~~ALk~AdVGIAl 827 (1191)
.+ . +.||. |..+.. .+.|...++.+.+ .|. .+.++|||.||.|||+.|+.||+.
T Consensus 127 ~d-G-~ltG~-------------------v~g~~~~~~~K~~~l~~~~~~~g~~~~~~~a~gDs~nDlpml~~ag~~ia~ 185 (212)
T COG0560 127 DD-G-KLTGR-------------------VVGPICDGEGKAKALRELAAELGIPLEETVAYGDSANDLPMLEAAGLPIAV 185 (212)
T ss_pred eC-C-EEece-------------------eeeeecCcchHHHHHHHHHHHcCCCHHHeEEEcCchhhHHHHHhCCCCeEe
Confidence 01 1 34444 444444 4789988866655 465 499999999999999999999999
Q ss_pred cc
Q 001010 828 LN 829 (1191)
Q Consensus 828 ~~ 829 (1191)
..
T Consensus 186 n~ 187 (212)
T COG0560 186 NP 187 (212)
T ss_pred Cc
Confidence 83
|
|
| >TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal | Back alignment and domain information |
|---|
Probab=98.40 E-value=1.5e-06 Score=94.71 Aligned_cols=167 Identities=13% Similarity=0.119 Sum_probs=96.8
Q ss_pred CcCCchhHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCC-----CCcEEEeecCCCceeeecCCCccccc------
Q 001010 673 CPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVT-----KPVLILCPVKNGKVYEWVSPDETEKI------ 741 (1191)
Q Consensus 673 d~lK~da~~~I~~L~~agi~vvMiTGDn~~TA~~VA~~~gI~~-----~~~~il~~~~~~~~~~w~~~d~~~~~------ 741 (1191)
..+-+++.++|++|++.|++++++||.+...+..+++++++.. +..++.... ..+.+....+....
T Consensus 17 ~~i~~~~~~~i~~l~~~g~~~~~~TGR~~~~~~~~~~~l~~~~~~i~~NGa~i~~~~---~~~~~~~~~~~~~~~~~~~~ 93 (215)
T TIGR01487 17 RMISERAIEAIRKAEKKGIPVSLVTGNTVPFARALAVLIGTSGPVVAENGGVIFYNK---EDIFLANMEEEWFLDEEKKK 93 (215)
T ss_pred cccCHHHHHHHHHHHHCCCEEEEEcCCcchhHHHHHHHhCCCCcEEEccCcEEEeCC---CcEEEecccchhhHHHhhhh
Confidence 3588999999999999999999999999999999999999742 222333211 11222111110000
Q ss_pred cCChHHHh-cccccce-EEEechhhhhhcchHHHHhhcCcce-----EEeecCh--hhHHHHHHHHhH-cC---CEEEEE
Q 001010 742 QYSEKEVE-GLTDAHD-LCIGGDCFEMLQQTSAVLRVIPYVK-----VFARVAP--EQKELILTTFKA-VG---RMTLMC 808 (1191)
Q Consensus 742 ~~~~~~~~-~~~~~~~-l~itG~~l~~l~~~~~~~~~l~~~~-----VfAR~sP--~qK~~iV~~Lq~-~g---~~V~m~ 808 (1191)
.+...... ....... +..+++..+.+.. .+.+ . ... .+..++| ..|...++.+.+ .| ..++++
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~l~~-~-~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~~i~~~~~i~i 169 (215)
T TIGR01487 94 RFPRDRLSNEYPRASLVIMREGKDVDEVRE--IIKE-R-GLNLVDSGFAIHIMKKGVDKGVGVEKLKELLGIKPEEVAAI 169 (215)
T ss_pred hhhhhhcccccceeEEEEecCCccHHHHHH--HHHh-C-CeEEEecCceEEEecCCCChHHHHHHHHHHhCCCHHHEEEE
Confidence 00000000 0000011 1122222222211 1111 0 111 1223333 589999988866 34 359999
Q ss_pred cCCccCHHHHhhCCceEEeccCCCccccccCCcccccc
Q 001010 809 GDGTNDVGALKQAHVGVALLNAVPPTQSGNSSSEASKD 846 (1191)
Q Consensus 809 GDG~ND~~ALk~AdVGIAl~~~~~e~~~~asdi~~~~~ 846 (1191)
||+.||.+|++.|+.|+||+|+.+++++.+..++..++
T Consensus 170 GDs~ND~~ml~~ag~~vam~na~~~~k~~A~~v~~~~~ 207 (215)
T TIGR01487 170 GDSENDIDLFRVVGFKVAVANADDQLKEIADYVTSNPY 207 (215)
T ss_pred CCCHHHHHHHHhCCCeEEcCCccHHHHHhCCEEcCCCC
Confidence 99999999999999999999987777666655554433
|
TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. |
| >PRK11133 serB phosphoserine phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.32 E-value=1.3e-06 Score=100.54 Aligned_cols=120 Identities=21% Similarity=0.324 Sum_probs=84.1
Q ss_pred CcCCchhHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCcEEEeecCCCceeeecCCCccccccCChHHHhccc
Q 001010 673 CPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLT 752 (1191)
Q Consensus 673 d~lK~da~~~I~~L~~agi~vvMiTGDn~~TA~~VA~~~gI~~~~~~il~~~~~~~~~~w~~~d~~~~~~~~~~~~~~~~ 752 (1191)
-++.|++.+.|+.|++.|+++.++||.....+..+.+++|+.. +.. ..++..
T Consensus 180 l~l~pGa~elL~~Lk~~G~~~aIvSgg~~~~~~~l~~~Lgld~----~~a-----n~lei~------------------- 231 (322)
T PRK11133 180 LPLMPGLTELVLKLQALGWKVAIASGGFTYFADYLRDKLRLDA----AVA-----NELEIM------------------- 231 (322)
T ss_pred CCCChhHHHHHHHHHHcCCEEEEEECCcchhHHHHHHHcCCCe----EEE-----eEEEEE-------------------
Confidence 4789999999999999999999999999888889999999841 110 000000
Q ss_pred ccceEEEechhhhhhcchHHHHhhcCcceEEeecChhhHHHHHHHHhH-cC---CEEEEEcCCccCHHHHhhCCceEEec
Q 001010 753 DAHDLCIGGDCFEMLQQTSAVLRVIPYVKVFARVAPEQKELILTTFKA-VG---RMTLMCGDGTNDVGALKQAHVGVALL 828 (1191)
Q Consensus 753 ~~~~l~itG~~l~~l~~~~~~~~~l~~~~VfAR~sP~qK~~iV~~Lq~-~g---~~V~m~GDG~ND~~ALk~AdVGIAl~ 828 (1191)
+-.+||.... .+ +..+.|.+.++.+.+ .| ..|.|+|||.||.+|++.|++|||+
T Consensus 232 ---dg~ltg~v~g---------------~i---v~~k~K~~~L~~la~~lgi~~~qtIaVGDg~NDl~m~~~AGlgiA~- 289 (322)
T PRK11133 232 ---DGKLTGNVLG---------------DI---VDAQYKADTLTRLAQEYEIPLAQTVAIGDGANDLPMIKAAGLGIAY- 289 (322)
T ss_pred ---CCEEEeEecC---------------cc---CCcccHHHHHHHHHHHcCCChhhEEEEECCHHHHHHHHHCCCeEEe-
Confidence 0012222110 01 233678888888765 34 5799999999999999999999999
Q ss_pred cCCCccccccCCccc
Q 001010 829 NAVPPTQSGNSSSEA 843 (1191)
Q Consensus 829 ~~~~e~~~~asdi~~ 843 (1191)
++.+.+ ++.++...
T Consensus 290 nAkp~V-k~~Ad~~i 303 (322)
T PRK11133 290 HAKPKV-NEQAQVTI 303 (322)
T ss_pred CCCHHH-HhhCCEEe
Confidence 666655 44555544
|
|
| >PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=98.32 E-value=5.5e-06 Score=93.71 Aligned_cols=172 Identities=16% Similarity=0.208 Sum_probs=98.1
Q ss_pred cCcCCchhHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCC-----CCcEEEeecCCCceeeecCCCcc--------
Q 001010 672 NCPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVT-----KPVLILCPVKNGKVYEWVSPDET-------- 738 (1191)
Q Consensus 672 ~d~lK~da~~~I~~L~~agi~vvMiTGDn~~TA~~VA~~~gI~~-----~~~~il~~~~~~~~~~w~~~d~~-------- 738 (1191)
...+-+.++++|++|++.|+++++.||.+...+..+.+++|+.. ++..|.+. ++..+.-..++..
T Consensus 17 ~~~i~~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~I~~~--~~~~l~~~~i~~~~~~~i~~~ 94 (272)
T PRK15126 17 DHHLGEKTLSTLARLRERDITLTFATGRHVLEMQHILGALSLDAYLITGNGTRVHSL--EGELLHRQDLPADVAELVLHQ 94 (272)
T ss_pred CCcCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCcEEecCCcEEEcC--CCCEEEeecCCHHHHHHHHHH
Confidence 34588999999999999999999999999999999999999741 22233221 1111110011000
Q ss_pred --------------ccc-cCChHHH----------------hccc--ccceEEEechh--hhhhcchHHHHhhcC-cceE
Q 001010 739 --------------EKI-QYSEKEV----------------EGLT--DAHDLCIGGDC--FEMLQQTSAVLRVIP-YVKV 782 (1191)
Q Consensus 739 --------------~~~-~~~~~~~----------------~~~~--~~~~l~itG~~--l~~l~~~~~~~~~l~-~~~V 782 (1191)
... ....... ..+. .-+.+++.++. ++.+. ..+.+.+. ...+
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~~~~~~~~~~~~~--~~l~~~~~~~~~~ 172 (272)
T PRK15126 95 QWDTRASMHVFNDDGWFTGKEIPALLQAHVYSGFRYQLIDLKRLPAHGVTKICFCGDHDDLTRLQ--IQLNEALGERAHL 172 (272)
T ss_pred hhhcCcEEEEEcCCeEEecCCcHHHHHHHHhcCCceEEecHHHccccCceEEEEECCHHHHHHHH--HHHHHHhcCCEEE
Confidence 000 0000000 0000 00111221111 11110 11222221 1111
Q ss_pred ------EeecChh--hHHHHHHHHhHc-C---CEEEEEcCCccCHHHHhhCCceEEeccCCCccccccCC--ccccccc
Q 001010 783 ------FARVAPE--QKELILTTFKAV-G---RMTLMCGDGTNDVGALKQAHVGVALLNAVPPTQSGNSS--SEASKDE 847 (1191)
Q Consensus 783 ------fAR~sP~--qK~~iV~~Lq~~-g---~~V~m~GDG~ND~~ALk~AdVGIAl~~~~~e~~~~asd--i~~~~~~ 847 (1191)
+-...|. .|..-++.|.+. | ..|+++|||-||.+||+.|+.||||+|+.+++++.+.. ++.++++
T Consensus 173 ~~s~~~~~eI~~~g~sKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm~Na~~~vK~~A~~~~v~~~n~e 251 (272)
T PRK15126 173 CFSATDCLEVLPVGCNKGAALAVLSQHLGLSLADCMAFGDAMNDREMLGSVGRGFIMGNAMPQLRAELPHLPVIGHCRN 251 (272)
T ss_pred EEcCCcEEEeecCCCChHHHHHHHHHHhCCCHHHeEEecCCHHHHHHHHHcCCceeccCChHHHHHhCCCCeecCCCcc
Confidence 2234554 599999888763 4 46999999999999999999999999988887666543 4555553
|
|
| >PRK10976 putative hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=98.32 E-value=5e-06 Score=93.70 Aligned_cols=63 Identities=24% Similarity=0.242 Sum_probs=49.1
Q ss_pred ecChh--hHHHHHHHHhH-cC---CEEEEEcCCccCHHHHhhCCceEEeccCCCccccccC--Cccccccc
Q 001010 785 RVAPE--QKELILTTFKA-VG---RMTLMCGDGTNDVGALKQAHVGVALLNAVPPTQSGNS--SSEASKDE 847 (1191)
Q Consensus 785 R~sP~--qK~~iV~~Lq~-~g---~~V~m~GDG~ND~~ALk~AdVGIAl~~~~~e~~~~as--di~~~~~~ 847 (1191)
...|. .|..-++.|.+ .| ..|+++|||.||.+||+.|+.||||+|+.+++++.+. .++.++++
T Consensus 183 eI~~~gvsKg~al~~l~~~lgi~~~~viafGD~~NDi~Ml~~ag~~vAm~NA~~~vK~~A~~~~v~~~n~e 253 (266)
T PRK10976 183 EVMAGGVSKGHALEAVAKKLGYSLKDCIAFGDGMNDAEMLSMAGKGCIMGNAHQRLKDLLPELEVIGSNAD 253 (266)
T ss_pred EEEcCCCChHHHHHHHHHHcCCCHHHeEEEcCCcccHHHHHHcCCCeeecCCcHHHHHhCCCCeecccCch
Confidence 44443 58888888765 34 4699999999999999999999999999888777654 45655554
|
|
| >PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification [] | Back alignment and domain information |
|---|
Probab=98.32 E-value=4.2e-06 Score=92.47 Aligned_cols=172 Identities=20% Similarity=0.237 Sum_probs=99.7
Q ss_pred cCcCCchhHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCC-----CCCcEEEeecCCCceeeecCCCcc--------
Q 001010 672 NCPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIV-----TKPVLILCPVKNGKVYEWVSPDET-------- 738 (1191)
Q Consensus 672 ~d~lK~da~~~I~~L~~agi~vvMiTGDn~~TA~~VA~~~gI~-----~~~~~il~~~~~~~~~~w~~~d~~-------- 738 (1191)
...+-++++++|++|+++|+++++.||.++..+..+.+++++. .++..+ ...+++.+.-..++..
T Consensus 13 ~~~i~~~~~~al~~l~~~g~~~~i~TGR~~~~~~~~~~~~~~~~~~I~~nGa~i--~~~~~~~l~~~~i~~~~~~~i~~~ 90 (254)
T PF08282_consen 13 DGKISPETIEALKELQEKGIKLVIATGRSYSSIKRLLKELGIDDYFICSNGALI--DDPKGKILYEKPIDSDDVKKILKY 90 (254)
T ss_dssp TSSSCHHHHHHHHHHHHTTCEEEEECSSTHHHHHHHHHHTTHCSEEEEGGGTEE--EETTTEEEEEESB-HHHHHHHHHH
T ss_pred CCeeCHHHHHHHHhhcccceEEEEEccCcccccccccccccchhhhccccccee--eecccccchhhheeccchhheeeh
Confidence 4457799999999999999999999999999999999999985 122222 1111111111111100
Q ss_pred --------------ccc-cCC--hHHH------------------hcccccceEEEech--hhhhhcchHHHHhhcCcce
Q 001010 739 --------------EKI-QYS--EKEV------------------EGLTDAHDLCIGGD--CFEMLQQTSAVLRVIPYVK 781 (1191)
Q Consensus 739 --------------~~~-~~~--~~~~------------------~~~~~~~~l~itG~--~l~~l~~~~~~~~~l~~~~ 781 (1191)
... ... .... .....-..+.+.++ .+..+. ..+.+......
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ki~~~~~~~~~~~l~--~~l~~~~~~~~ 168 (254)
T PF08282_consen 91 LKEHNISFFFYTDDDIYIYENKDEEELFFEHKFFNFKESIVSEDDLEDEEIFKILFFPDPEDLEQLR--EELKKKFPNLI 168 (254)
T ss_dssp HHHTTCEEEEEESSEEEESSTTCHHHHHHHHHHTSCEEEESHHHHHHCSSESEEEEESCHHHHHHHH--HHHHHHHTTTE
T ss_pred hhhcccccccccceeeecccccccchhhhhhcccccccccccccccccccceeeeccccchhhhhhh--hhhccccCcce
Confidence 000 000 0000 00000011111111 111111 22333333221
Q ss_pred EEe-------ecCh--hhHHHHHHHHhH-cC---CEEEEEcCCccCHHHHhhCCceEEeccCCCccccccCCccccccc
Q 001010 782 VFA-------RVAP--EQKELILTTFKA-VG---RMTLMCGDGTNDVGALKQAHVGVALLNAVPPTQSGNSSSEASKDE 847 (1191)
Q Consensus 782 VfA-------R~sP--~qK~~iV~~Lq~-~g---~~V~m~GDG~ND~~ALk~AdVGIAl~~~~~e~~~~asdi~~~~~~ 847 (1191)
.+. .++| -.|..-++.|.+ .| ..++++||+.||.+||+.|+.|+||+++.++.++.+..++..+++
T Consensus 169 ~~~~~~~~~lei~~~~vsK~~ai~~l~~~~~i~~~~~~~~GD~~ND~~Ml~~~~~~~am~na~~~~k~~a~~i~~~~~~ 247 (254)
T PF08282_consen 169 DVVRSSPYFLEITPKGVSKGSAIKYLLEYLGISPEDIIAFGDSENDIEMLELAGYSVAMGNATPELKKAADYITPSNND 247 (254)
T ss_dssp EEEEEETTEEEEEETTSSHHHHHHHHHHHHTTSGGGEEEEESSGGGHHHHHHSSEEEEETTS-HHHHHHSSEEESSGTC
T ss_pred eEEEecccceEEeeCCCCHHHHHHHHhhhcccccceeEEeecccccHhHHhhcCeEEEEcCCCHHHHHhCCEEecCCCC
Confidence 222 2344 469988888875 23 579999999999999999999999999988887777666665554
|
This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A .... |
| >PRK01158 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.31 E-value=1.9e-06 Score=94.84 Aligned_cols=167 Identities=16% Similarity=0.115 Sum_probs=94.9
Q ss_pred cCCchhHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCC-----CCcEEEeecCCCceeeecCCCccccccCChHHH
Q 001010 674 PIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVT-----KPVLILCPVKNGKVYEWVSPDETEKIQYSEKEV 748 (1191)
Q Consensus 674 ~lK~da~~~I~~L~~agi~vvMiTGDn~~TA~~VA~~~gI~~-----~~~~il~~~~~~~~~~w~~~d~~~~~~~~~~~~ 748 (1191)
++-+.+.++|++|++.|++++++||.....+..+++++|+.. +...+.+. ..+..+.....+..... ....
T Consensus 20 ~i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~-~~~~~~~~~~~~~~~~~---~~~~ 95 (230)
T PRK01158 20 RLSLKAVEAIRKAEKLGIPVILATGNVLCFARAAAKLIGTSGPVIAENGGVISVG-FDGKRIFLGDIEECEKA---YSEL 95 (230)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCCCcEEEecCeEEEEc-CCCCEEEEcchHHHHHH---HHHH
Confidence 378899999999999999999999999999999999999742 11122211 11111111111100000 0000
Q ss_pred hc-----------cccc---ceEEE-echhhhhhcchHHHHhhcCcce-----EEeecChhh--HHHHHHHHhHc-C---
Q 001010 749 EG-----------LTDA---HDLCI-GGDCFEMLQQTSAVLRVIPYVK-----VFARVAPEQ--KELILTTFKAV-G--- 802 (1191)
Q Consensus 749 ~~-----------~~~~---~~l~i-tG~~l~~l~~~~~~~~~l~~~~-----VfAR~sP~q--K~~iV~~Lq~~-g--- 802 (1191)
.+ .... ..+.+ +....+.+. ..+.+.-.... .+....|.. |..-++.+.+. |
T Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~l~~~~~~~~~~~~~~~~ei~~~~~~Kg~al~~l~~~~~i~~ 173 (230)
T PRK01158 96 KKRFPEASTSLTKLDPDYRKTEVALRRTVPVEEVR--ELLEELGLDLEIVDSGFAIHIKSPGVNKGTGLKKLAELMGIDP 173 (230)
T ss_pred HHhccccceeeecCCcccccceeeecccccHHHHH--HHHHHcCCcEEEEecceEEEEeeCCCChHHHHHHHHHHhCCCH
Confidence 00 0000 00111 111111110 11111111111 123455544 88888887653 3
Q ss_pred CEEEEEcCCccCHHHHhhCCceEEeccCCCccccccCCcccccc
Q 001010 803 RMTLMCGDGTNDVGALKQAHVGVALLNAVPPTQSGNSSSEASKD 846 (1191)
Q Consensus 803 ~~V~m~GDG~ND~~ALk~AdVGIAl~~~~~e~~~~asdi~~~~~ 846 (1191)
..++++|||.||.+|++.|++|+||+|+.+++++.+..++.+++
T Consensus 174 ~~~i~~GD~~NDi~m~~~ag~~vam~Na~~~vk~~a~~v~~~n~ 217 (230)
T PRK01158 174 EEVAAIGDSENDLEMFEVAGFGVAVANADEELKEAADYVTEKSY 217 (230)
T ss_pred HHEEEECCchhhHHHHHhcCceEEecCccHHHHHhcceEecCCC
Confidence 36999999999999999999999999988887765555554444
|
|
| >PLN02887 hydrolase family protein | Back alignment and domain information |
|---|
Probab=98.29 E-value=8.4e-06 Score=100.45 Aligned_cols=59 Identities=31% Similarity=0.364 Sum_probs=46.7
Q ss_pred hHHHHHHHHhHc-C---CEEEEEcCCccCHHHHhhCCceEEeccCCCccccccCCcccccccc
Q 001010 790 QKELILTTFKAV-G---RMTLMCGDGTNDVGALKQAHVGVALLNAVPPTQSGNSSSEASKDEN 848 (1191)
Q Consensus 790 qK~~iV~~Lq~~-g---~~V~m~GDG~ND~~ALk~AdVGIAl~~~~~e~~~~asdi~~~~~~~ 848 (1191)
.|..-|+.|.+. | ..|+++|||.||.+||+.|+.||||+|+.+++++.+..++.++++.
T Consensus 507 SKG~ALk~L~e~lGI~~eeviAFGDs~NDIeMLe~AG~gVAMgNA~eeVK~~Ad~VT~sNdED 569 (580)
T PLN02887 507 SKGNGVKMLLNHLGVSPDEIMAIGDGENDIEMLQLASLGVALSNGAEKTKAVADVIGVSNDED 569 (580)
T ss_pred CHHHHHHHHHHHcCCCHHHEEEEecchhhHHHHHHCCCEEEeCCCCHHHHHhCCEEeCCCCcC
Confidence 577777776553 3 3699999999999999999999999999888777666666665543
|
|
| >TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily | Back alignment and domain information |
|---|
Probab=98.23 E-value=6e-06 Score=90.44 Aligned_cols=169 Identities=17% Similarity=0.218 Sum_probs=95.3
Q ss_pred cCCchhHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCC-----CCcEEEeecCCCceeeecC-CCccc------cc
Q 001010 674 PIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVT-----KPVLILCPVKNGKVYEWVS-PDETE------KI 741 (1191)
Q Consensus 674 ~lK~da~~~I~~L~~agi~vvMiTGDn~~TA~~VA~~~gI~~-----~~~~il~~~~~~~~~~w~~-~d~~~------~~ 741 (1191)
.+-+.+.++|++|++.||+++++||.+...+..+++++|+.. +...+... + +....|.. .++.. ..
T Consensus 15 ~i~~~~~~al~~l~~~Gi~~~~aTGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~-~-~~~~~~~~~~~~~~~~~~~~~~ 92 (225)
T TIGR01482 15 AINESALEAIRKAESVGIPVVLVTGNSVQFARALAKLIGTPDPVIAENGGEISYN-E-GMDDIFLAYLEEEWFLDIVIAK 92 (225)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCCCeEEEecCcEEEeC-C-CCceEEecccCHHHHHHHHHhc
Confidence 477899999999999999999999999999999999999531 11122211 1 11111211 11100 00
Q ss_pred cCChHHHh-ccc-ccceEEE-echhhhhhcchHHHHhhcC-cce-----EEeecCh--hhHHHHHHHHhH-cC---CEEE
Q 001010 742 QYSEKEVE-GLT-DAHDLCI-GGDCFEMLQQTSAVLRVIP-YVK-----VFARVAP--EQKELILTTFKA-VG---RMTL 806 (1191)
Q Consensus 742 ~~~~~~~~-~~~-~~~~l~i-tG~~l~~l~~~~~~~~~l~-~~~-----VfAR~sP--~qK~~iV~~Lq~-~g---~~V~ 806 (1191)
........ ... .....++ .....+.+ ..+.+.+. ... .+....| ..|..-++.+.+ .| ..|+
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~~i~~~~~i 169 (225)
T TIGR01482 93 TFPFSRLKVQYPRRASLVKMRYGIDVDTV---REIIKELGLNLVAVDSGFDIHILPQGVNKGVAVKKLKEKLGIKPGETL 169 (225)
T ss_pred ccchhhhccccccccceEEEeecCCHHHH---HHHHHhcCceEEEecCCcEEEEeeCCCCHHHHHHHHHHHhCCCHHHEE
Confidence 00000000 000 0011111 11111111 11111111 111 1223334 378888888765 34 4699
Q ss_pred EEcCCccCHHHHhhCCceEEeccCCCccccccCCccccccc
Q 001010 807 MCGDGTNDVGALKQAHVGVALLNAVPPTQSGNSSSEASKDE 847 (1191)
Q Consensus 807 m~GDG~ND~~ALk~AdVGIAl~~~~~e~~~~asdi~~~~~~ 847 (1191)
++||+.||.+|++.|++|+||+|+.+++++.+..++..+++
T Consensus 170 ~~GD~~NDi~m~~~ag~~vam~Na~~~~k~~A~~vt~~~~~ 210 (225)
T TIGR01482 170 VCGDSENDIDLFEVPGFGVAVANAQPELKEWADYVTESPYG 210 (225)
T ss_pred EECCCHhhHHHHHhcCceEEcCChhHHHHHhcCeecCCCCC
Confidence 99999999999999999999999888776666666655553
|
catalyze the same reaction as SPP. |
| >PF00689 Cation_ATPase_C: Cation transporting ATPase, C-terminus; InterPro: IPR006068 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane | Back alignment and domain information |
|---|
Probab=98.19 E-value=6.4e-06 Score=87.32 Aligned_cols=153 Identities=15% Similarity=0.091 Sum_probs=102.3
Q ss_pred cccchHHHHHhHHHH-HHHHHhhccCCCCccccCCCC---CCccchhhHHHHHHHHHHHHHHHHHHhhhhcccCCCCCCC
Q 001010 987 KLGDVQATISGVFTA-AFFLFISHARPLPTLSAARPH---PNIFCSYVFLSLMGQFAIHLFFLISSVKEAEKYMPDECIE 1062 (1191)
Q Consensus 987 ~~~d~Q~~~~~~l~~-~~~~~~s~~~p~~~Ls~~rP~---~~if~~~~~~si~~Q~~i~~~~l~~~~~~~~~~~~~~~~~ 1062 (1191)
.++..|.++.++++. .+++.++..+|.+.+-+++|. .+|++..++..++.|.++..++.+..+.....+...+ +
T Consensus 3 Pl~~~qiL~inli~d~~~a~al~~e~~~~~im~r~Pr~~~~~l~~~~~~~~i~~~g~~~~~~~~~~f~~~~~~~~~~--~ 80 (182)
T PF00689_consen 3 PLTPIQILWINLITDLLPALALGFEPPDPDIMKRPPRDPNEPLINKRLLRRILIQGLIMAAACFFAFFLGLYIFGWD--E 80 (182)
T ss_dssp SS-HHHHHHHHHTTTHHHHHHGGGSS-STTGGGS---TTTS-SSSHHHHHHHCCHHHHHHHHHHHHHHHHHHSTCSS--S
T ss_pred CCcHHHHHHHHHHHHHHHHHHHhcCcchhhhhhccccccchhhccHHhHhHHHHHHHHHHHHHHHHHHHHhhccccc--c
Confidence 467899999999985 469999999999999888776 7799999999998888777766655544333221110 0
Q ss_pred CCCCCCCcccchhhhHHHHHHHHhhheeE-e-cCCCcc-cccccchhHHHHHHHHHHHHHHhhcccchhhhhccceeeCC
Q 001010 1063 PDADFHPNLVNTVSYMVNMMIQVATFAVN-Y-MGHPFN-QSISENKPFMYALMGAVGFFTVITSDLLRSLNDWLKLVPLP 1139 (1191)
Q Consensus 1063 ~~~~f~p~~~nt~vfl~~~~~~i~~~~v~-~-~g~Pf~-~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~lv~~p 1139 (1191)
.+..-......|..|....+.|+...... + .+..|+ +++++|+.+++++++..++.+.+.. .|.+++.|++.++|
T Consensus 81 ~~~~~~~~~a~T~~F~~lv~~q~~~~~~~r~~~~~~~~~~~~~~N~~l~~~~~~~~~l~~~i~~--~P~~~~~f~~~~l~ 158 (182)
T PF00689_consen 81 ETNNDNLAQAQTMAFTALVLSQLFNAFNCRSRRRSVFRFRGIFSNKWLLIAILISIALQILIVY--VPGLNRIFGTAPLP 158 (182)
T ss_dssp HHHTTCHHHHHHHHHHHHHHHHHHHHHHTSSSSSTCTT-STGGGSHHHHHHHHHHHHHHHHHHH--STTHHHHST----T
T ss_pred ccchhHHHHHHHHHHHHHHHHHHhhhcccccccccceecccccccchHHHHHHHHHHHHHHHhc--chhhHhhhcccCCC
Confidence 00000134567999999998888653333 3 245676 7999999999999998877776643 47899999999997
Q ss_pred hhHH
Q 001010 1140 SGLR 1143 (1191)
Q Consensus 1140 ~~~~ 1143 (1191)
....
T Consensus 159 ~~~w 162 (182)
T PF00689_consen 159 LWQW 162 (182)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 6433
|
ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the conserved C-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+ (3.6.3.6 from EC), Na+ (3.6.3.7 from EC), Ca2+ (3.6.3.8 from EC), Na+/K+ (3.6.3.9 from EC), and H+/K+ (3.6.3.10 from EC). In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. More information about this protein can be found at Protein of the Month: ATP Synthases [].; PDB: 3A3Y_A 2ZXE_A 2XZB_A 3B9B_A 3N5K_A 3FPS_A 3B9R_A 1WPG_C 2AGV_A 2O9J_A .... |
| >TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit | Back alignment and domain information |
|---|
Probab=98.16 E-value=3.2e-06 Score=88.31 Aligned_cols=97 Identities=18% Similarity=0.179 Sum_probs=73.2
Q ss_pred HHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCcEEEeecCCCceeeecCCCccccccCChHHHhcccccceEEEe
Q 001010 681 KILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLTDAHDLCIG 760 (1191)
Q Consensus 681 ~~I~~L~~agi~vvMiTGDn~~TA~~VA~~~gI~~~~~~il~~~~~~~~~~w~~~d~~~~~~~~~~~~~~~~~~~~l~it 760 (1191)
..|+.|++.|+++.++|+.+...+....+.+|+..
T Consensus 41 ~~~~~L~~~Gi~laIiT~k~~~~~~~~l~~lgi~~--------------------------------------------- 75 (169)
T TIGR02726 41 MGVIVLQLCGIDVAIITSKKSGAVRHRAEELKIKR--------------------------------------------- 75 (169)
T ss_pred HHHHHHHHCCCEEEEEECCCcHHHHHHHHHCCCcE---------------------------------------------
Confidence 58999999999999999999999999999999841
Q ss_pred chhhhhhcchHHHHhhcCcceEEeec--ChhhHHHHHHHHhHcCCEEEEEcCCccCHHHHhhCCceEEeccCCCcccccc
Q 001010 761 GDCFEMLQQTSAVLRVIPYVKVFARV--APEQKELILTTFKAVGRMTLMCGDGTNDVGALKQAHVGVALLNAVPPTQSGN 838 (1191)
Q Consensus 761 G~~l~~l~~~~~~~~~l~~~~VfAR~--sP~qK~~iV~~Lq~~g~~V~m~GDG~ND~~ALk~AdVGIAl~~~~~e~~~~a 838 (1191)
.|... .|+--..+++.++-....++|+||+.||.+|++.|++++||.++.+++++.+
T Consensus 76 ---------------------~f~~~kpkp~~~~~~~~~l~~~~~ev~~iGD~~nDi~~~~~ag~~~am~nA~~~lk~~A 134 (169)
T TIGR02726 76 ---------------------FHEGIKKKTEPYAQMLEEMNISDAEVCYVGDDLVDLSMMKRVGLAVAVGDAVADVKEAA 134 (169)
T ss_pred ---------------------EEecCCCCHHHHHHHHHHcCcCHHHEEEECCCHHHHHHHHHCCCeEECcCchHHHHHhC
Confidence 11111 2333344444443333579999999999999999999999999887766555
Q ss_pred CCccc
Q 001010 839 SSSEA 843 (1191)
Q Consensus 839 sdi~~ 843 (1191)
..++.
T Consensus 135 ~~I~~ 139 (169)
T TIGR02726 135 AYVTT 139 (169)
T ss_pred CEEcC
Confidence 44443
|
Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases. |
| >smart00831 Cation_ATPase_N Cation transporter/ATPase, N-terminus | Back alignment and domain information |
|---|
Probab=98.14 E-value=4.6e-06 Score=72.61 Aligned_cols=52 Identities=15% Similarity=0.157 Sum_probs=46.1
Q ss_pred CCCCHHHHHHHHhccCCCccCCCC-CcHHHHHHHHhhhHHHHHHHHHHHHHhh
Q 001010 164 GHSTEAKIAVATEKWGRNVFEYPQ-PTFQKLMKENCMEPFFVFQVFCVGLWCL 215 (1191)
Q Consensus 164 g~ls~~e~~~~~~~yG~N~i~i~~-~s~~~ll~~~~~~pf~vfqi~~v~lw~l 215 (1191)
.|++++|+++|+++||+|+++.+. ++++.++++++.+|+.++++++.+++++
T Consensus 9 ~GLs~~~v~~r~~~~G~N~l~~~~~~s~~~~~l~~~~~p~~~iL~~~a~is~~ 61 (64)
T smart00831 9 SGLSSEEAARRLERYGPNELPPPKKRSPLLRFLRQFHNPLIYILLAAAVLSAL 61 (64)
T ss_pred cCCCHHHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 377899999999999999998876 7999999999999999999888777653
|
This entry represents the conserved N-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+, Na+, Ca2+, Na+/K+, and H+/K+. In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. In gastric H+/K+-ATPases, this domain undergoes reversible sequential phosphorylation inducing conformational changes that may be important for regulating the function of these ATPases PUBMED:12480547, PUBMED:12529322. |
| >PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B | Back alignment and domain information |
|---|
Probab=98.12 E-value=7.5e-06 Score=87.09 Aligned_cols=92 Identities=17% Similarity=0.178 Sum_probs=70.1
Q ss_pred chhHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCcEEEeecCCCceeeecCCCccccccCChHHHhcccccce
Q 001010 677 EDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLTDAHD 756 (1191)
Q Consensus 677 ~da~~~I~~L~~agi~vvMiTGDn~~TA~~VA~~~gI~~~~~~il~~~~~~~~~~w~~~d~~~~~~~~~~~~~~~~~~~~ 756 (1191)
+++.+.|+.++++|++++++||+....+.++|+.+|+.......... .. +
T Consensus 92 ~~~~e~i~~~~~~~~~v~IvS~~~~~~i~~~~~~~~i~~~~v~~~~~-~~----------~------------------- 141 (192)
T PF12710_consen 92 PDAMELIRELKDNGIKVVIVSGSPDEIIEPIAERLGIDDDNVIGNEL-FD----------N------------------- 141 (192)
T ss_dssp TTHHHHHHHHHHTTSEEEEEEEEEHHHHHHHHHHTTSSEGGEEEEEE-EC----------T-------------------
T ss_pred hhHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCceEEEEEee-ee----------c-------------------
Confidence 78889999999999999999999999999999999996321111100 00 0
Q ss_pred EEEechhhhhhcchHHHHhhcCcceEEeecChh-h--HHHHHHHH------hHcCCEEEEEcCCccCHHHHh
Q 001010 757 LCIGGDCFEMLQQTSAVLRVIPYVKVFARVAPE-Q--KELILTTF------KAVGRMTLMCGDGTNDVGALK 819 (1191)
Q Consensus 757 l~itG~~l~~l~~~~~~~~~l~~~~VfAR~sP~-q--K~~iV~~L------q~~g~~V~m~GDG~ND~~ALk 819 (1191)
.+....+|.+|. + |...++.+ +.....+.++|||.||.+|||
T Consensus 142 ---------------------~~~~~~~~~~~~~~~~K~~~l~~~~~~~~~~~~~~~~~~iGDs~~D~~~lr 192 (192)
T PF12710_consen 142 ---------------------GGGIFTGRITGSNCGGKAEALKELYIRDEEDIDPDRVIAIGDSINDLPMLR 192 (192)
T ss_dssp ---------------------TCCEEEEEEEEEEESHHHHHHHHHHHHHHHTHTCCEEEEEESSGGGHHHHH
T ss_pred ---------------------ccceeeeeECCCCCCcHHHHHHHHHHHhhcCCCCCeEEEEECCHHHHHHhC
Confidence 012355666665 4 99999999 445789999999999999997
|
|
| >PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.12 E-value=2.4e-05 Score=88.25 Aligned_cols=41 Identities=12% Similarity=0.209 Sum_probs=38.5
Q ss_pred cCCchhHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCC
Q 001010 674 PIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIV 714 (1191)
Q Consensus 674 ~lK~da~~~I~~L~~agi~vvMiTGDn~~TA~~VA~~~gI~ 714 (1191)
.+-+.++++|+++++.||++++.||.+...+..+++++++.
T Consensus 20 ~i~~~~~~ai~~~~~~G~~~~iaTGR~~~~~~~~~~~l~~~ 60 (272)
T PRK10530 20 TILPESLEALARAREAGYKVIIVTGRHHVAIHPFYQALALD 60 (272)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHhcCCC
Confidence 57889999999999999999999999999999999999874
|
|
| >TIGR00338 serB phosphoserine phosphatase SerB | Back alignment and domain information |
|---|
Probab=98.11 E-value=9.4e-06 Score=88.60 Aligned_cols=122 Identities=25% Similarity=0.312 Sum_probs=82.5
Q ss_pred cCCchhHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCcEEEeecCCCceeeecCCCccccccCChHHHhcccc
Q 001010 674 PIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLTD 753 (1191)
Q Consensus 674 ~lK~da~~~I~~L~~agi~vvMiTGDn~~TA~~VA~~~gI~~~~~~il~~~~~~~~~~w~~~d~~~~~~~~~~~~~~~~~ 753 (1191)
+++|++++.++.|++.|+++.++||.+...+..+.+.+|+.. +... .+.+. +
T Consensus 85 ~~~~g~~~~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~~i~~----~~~~-----~~~~~--~----------------- 136 (219)
T TIGR00338 85 PLTEGAEELVKTLKEKGYKVAVISGGFDLFAEHVKDKLGLDA----AFAN-----RLEVE--D----------------- 136 (219)
T ss_pred CcCCCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCc----eEee-----EEEEE--C-----------------
Confidence 689999999999999999999999999999999999999852 1100 00000 0
Q ss_pred cceEEEechhhhhhcchHHHHhhcCcceEEee-cChhhHHHHHHHHhHc-C---CEEEEEcCCccCHHHHhhCCceEEec
Q 001010 754 AHDLCIGGDCFEMLQQTSAVLRVIPYVKVFAR-VAPEQKELILTTFKAV-G---RMTLMCGDGTNDVGALKQAHVGVALL 828 (1191)
Q Consensus 754 ~~~l~itG~~l~~l~~~~~~~~~l~~~~VfAR-~sP~qK~~iV~~Lq~~-g---~~V~m~GDG~ND~~ALk~AdVGIAl~ 828 (1191)
-.++|. +.++ ..++.|..+++.+.+. | ..++|+||+.||..|+++|++|+++.
T Consensus 137 ---~~~~~~-------------------~~~~~~~~~~k~~~~~~~~~~~~~~~~~~i~iGDs~~Di~aa~~ag~~i~~~ 194 (219)
T TIGR00338 137 ---GKLTGL-------------------VEGPIVDASYKGKTLLILLRKEGISPENTVAVGDGANDLSMIKAAGLGIAFN 194 (219)
T ss_pred ---CEEEEE-------------------ecCcccCCcccHHHHHHHHHHcCCCHHHEEEEECCHHHHHHHHhCCCeEEeC
Confidence 001111 1111 1233466666655443 3 35899999999999999999999986
Q ss_pred cCCCccccccCCccccccc
Q 001010 829 NAVPPTQSGNSSSEASKDE 847 (1191)
Q Consensus 829 ~~~~e~~~~asdi~~~~~~ 847 (1191)
+.+..+++++.++.+++
T Consensus 195 --~~~~~~~~a~~~i~~~~ 211 (219)
T TIGR00338 195 --AKPKLQQKADICINKKD 211 (219)
T ss_pred --CCHHHHHhchhccCCCC
Confidence 33445556666665553
|
Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins. |
| >TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal | Back alignment and domain information |
|---|
Probab=98.06 E-value=2.2e-05 Score=84.15 Aligned_cols=106 Identities=21% Similarity=0.261 Sum_probs=76.5
Q ss_pred cCCchhHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCC-cEEEeecCCCceeeecCCCccccccCChHHHhccc
Q 001010 674 PIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKP-VLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLT 752 (1191)
Q Consensus 674 ~lK~da~~~I~~L~~agi~vvMiTGDn~~TA~~VA~~~gI~~~~-~~il~~~~~~~~~~w~~~d~~~~~~~~~~~~~~~~ 752 (1191)
+++|++.+.|+.|++.|+++.++||-....+..+++.+|+..-- ..+.. ...+
T Consensus 80 ~~~~g~~e~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~g~~~~~~~~~~~-~~~g------------------------- 133 (201)
T TIGR01491 80 SLRDYAEELVRWLKEKGLKTAIVSGGIMCLAKKVAEKLNPDYVYSNELVF-DEKG------------------------- 133 (201)
T ss_pred CCCccHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHhCCCeEEEEEEEE-cCCC-------------------------
Confidence 68999999999999999999999999999999999999973100 00000 0000
Q ss_pred ccceEEEechhhhhhcchHHHHhhcCcceEEeecChhhHHHHHHHHhHc-C---CEEEEEcCCccCHHHHhhCCceEEec
Q 001010 753 DAHDLCIGGDCFEMLQQTSAVLRVIPYVKVFARVAPEQKELILTTFKAV-G---RMTLMCGDGTNDVGALKQAHVGVALL 828 (1191)
Q Consensus 753 ~~~~l~itG~~l~~l~~~~~~~~~l~~~~VfAR~sP~qK~~iV~~Lq~~-g---~~V~m~GDG~ND~~ALk~AdVGIAl~ 828 (1191)
..+ + ..+-.+.|..|..+++.+.+. | ..++|+||+.||.+|+++|++++++.
T Consensus 134 -----~~~-----------------p--~~~~~~~~~~k~~~~~~~~~~~~~~~~~~i~iGDs~~D~~~a~~ag~~~a~~ 189 (201)
T TIGR01491 134 -----FIQ-----------------P--DGIVRVTFDNKGEAVERLKRELNPSLTETVAVGDSKNDLPMFEVADISISLG 189 (201)
T ss_pred -----eEe-----------------c--ceeeEEccccHHHHHHHHHHHhCCCHHHEEEEcCCHhHHHHHHhcCCeEEEC
Confidence 000 0 012234566787777766543 3 35999999999999999999999997
Q ss_pred c
Q 001010 829 N 829 (1191)
Q Consensus 829 ~ 829 (1191)
.
T Consensus 190 ~ 190 (201)
T TIGR01491 190 D 190 (201)
T ss_pred C
Confidence 4
|
This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog. |
| >TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family | Back alignment and domain information |
|---|
Probab=98.05 E-value=1.1e-05 Score=83.34 Aligned_cols=93 Identities=16% Similarity=0.155 Sum_probs=68.2
Q ss_pred HHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCcEEEeecCCCceeeecCCCccccccCChHHHhcccccceEEEec
Q 001010 682 ILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLTDAHDLCIGG 761 (1191)
Q Consensus 682 ~I~~L~~agi~vvMiTGDn~~TA~~VA~~~gI~~~~~~il~~~~~~~~~~w~~~d~~~~~~~~~~~~~~~~~~~~l~itG 761 (1191)
+|++|++.|+++.++||++...+..+.++.|+..
T Consensus 36 ~i~~Lk~~G~~i~IvTn~~~~~~~~~l~~~gi~~---------------------------------------------- 69 (154)
T TIGR01670 36 GIRCALKSGIEVAIITGRKAKLVEDRCKTLGITH---------------------------------------------- 69 (154)
T ss_pred HHHHHHHCCCEEEEEECCCCHHHHHHHHHcCCCE----------------------------------------------
Confidence 8999999999999999999999999999999841
Q ss_pred hhhhhhcchHHHHhhcCcceEEeecChhhHHHHHHHH-hH---cCCEEEEEcCCccCHHHHhhCCceEEeccCCCccccc
Q 001010 762 DCFEMLQQTSAVLRVIPYVKVFARVAPEQKELILTTF-KA---VGRMTLMCGDGTNDVGALKQAHVGVALLNAVPPTQSG 837 (1191)
Q Consensus 762 ~~l~~l~~~~~~~~~l~~~~VfAR~sP~qK~~iV~~L-q~---~g~~V~m~GDG~ND~~ALk~AdVGIAl~~~~~e~~~~ 837 (1191)
.|... ..|...++.+ ++ ....++|+||+.||..|++.|++++++.++.+.. +.
T Consensus 70 --------------------~~~~~--~~k~~~~~~~~~~~~~~~~~~~~vGDs~~D~~~~~~ag~~~~v~~~~~~~-~~ 126 (154)
T TIGR01670 70 --------------------LYQGQ--SNKLIAFSDILEKLALAPENVAYIGDDLIDWPVMEKVGLSVAVADAHPLL-IP 126 (154)
T ss_pred --------------------EEecc--cchHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCeEecCCcCHHH-HH
Confidence 00000 1233333333 22 2357999999999999999999999999876543 33
Q ss_pred cCCccc
Q 001010 838 NSSSEA 843 (1191)
Q Consensus 838 asdi~~ 843 (1191)
.++.+.
T Consensus 127 ~a~~i~ 132 (154)
T TIGR01670 127 RADYVT 132 (154)
T ss_pred hCCEEe
Confidence 344333
|
The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved. |
| >TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family | Back alignment and domain information |
|---|
Probab=97.98 E-value=5.6e-05 Score=84.81 Aligned_cols=40 Identities=13% Similarity=0.135 Sum_probs=36.8
Q ss_pred CCchhHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCC
Q 001010 675 IREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIV 714 (1191)
Q Consensus 675 lK~da~~~I~~L~~agi~vvMiTGDn~~TA~~VA~~~gI~ 714 (1191)
.-+.++++|+.|++.|++++++||..+..+..+.+++|+.
T Consensus 17 ~~~~~~~~i~~l~~~g~~~~~~TgR~~~~~~~~~~~~~~~ 56 (256)
T TIGR01486 17 DWGPAKEVLERLQELGIPVIPCTSKTAAEVEYLRKELGLE 56 (256)
T ss_pred CchHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCC
Confidence 4456999999999999999999999999999999999974
|
This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta |
| >TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase | Back alignment and domain information |
|---|
Probab=97.97 E-value=2.9e-05 Score=84.68 Aligned_cols=112 Identities=15% Similarity=0.144 Sum_probs=76.5
Q ss_pred CcCCchhHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCcEEEeecCCCceeeecCCCccccccCChHHHhccc
Q 001010 673 CPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLT 752 (1191)
Q Consensus 673 d~lK~da~~~I~~L~~agi~vvMiTGDn~~TA~~VA~~~gI~~~~~~il~~~~~~~~~~w~~~d~~~~~~~~~~~~~~~~ 752 (1191)
.+++|++.+.++.|++.|+++.++||.....+..+.+.++... .+...
T Consensus 69 ~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~~~~~---~i~~n----------------------------- 116 (214)
T TIGR03333 69 AEIREGFREFVAFINEHGIPFYVISGGMDFFVYPLLEGIVEKD---RIYCN----------------------------- 116 (214)
T ss_pred CcccccHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHhhCCcc---cEEec-----------------------------
Confidence 5889999999999999999999999999999999988874321 11110
Q ss_pred ccceEEEechhhhhhcchHHHHhhcCcceEE--eecChhhHHHHHHHHhHcCCEEEEEcCCccCHHHHhhCCceEEec
Q 001010 753 DAHDLCIGGDCFEMLQQTSAVLRVIPYVKVF--ARVAPEQKELILTTFKAVGRMTLMCGDGTNDVGALKQAHVGVALL 828 (1191)
Q Consensus 753 ~~~~l~itG~~l~~l~~~~~~~~~l~~~~Vf--AR~sP~qK~~iV~~Lq~~g~~V~m~GDG~ND~~ALk~AdVGIAl~ 828 (1191)
++.+.|+.+..-. ++-..+ .......|..+++.++.....+.|+|||.||..|++.||+++|=.
T Consensus 117 ---~~~~~~~~~~~~~---------p~~~~~~~~~~cg~~K~~~l~~~~~~~~~~i~iGDg~~D~~~a~~Ad~~~ar~ 182 (214)
T TIGR03333 117 ---EADFSNEYIHIDW---------PHPCDGTCQNQCGCCKPSLIRKLSEPNDYHIVIGDSVTDVEAAKQSDLCFARD 182 (214)
T ss_pred ---eeEeeCCeeEEeC---------CCCCccccccCCCCCHHHHHHHHhhcCCcEEEEeCCHHHHHHHHhCCeeEehH
Confidence 0001111000000 000000 001134799999999888888999999999999999999977743
|
Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX. |
| >KOG1615 consensus Phosphoserine phosphatase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.90 E-value=1.7e-05 Score=81.59 Aligned_cols=106 Identities=20% Similarity=0.222 Sum_probs=74.9
Q ss_pred cCCchhHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCC----cEEEeecCCCceeeecCCCccccccCChHHHh
Q 001010 674 PIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKP----VLILCPVKNGKVYEWVSPDETEKIQYSEKEVE 749 (1191)
Q Consensus 674 ~lK~da~~~I~~L~~agi~vvMiTGDn~~TA~~VA~~~gI~~~~----~~il~~~~~~~~~~w~~~d~~~~~~~~~~~~~ 749 (1191)
.+-|++++.++.|++.|.+|.++||--..-+.+||.++||.-.+ .+..+.++ +-.
T Consensus 88 ~lT~Gi~eLv~~L~~~~~~v~liSGGF~~~i~~Va~~Lgi~~~n~yAN~l~fd~~G--k~~------------------- 146 (227)
T KOG1615|consen 88 TLTPGIRELVSRLHARGTQVYLISGGFRQLIEPVAEQLGIPKSNIYANELLFDKDG--KYL------------------- 146 (227)
T ss_pred ccCCCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHHhCCcHhhhhhheeeeccCC--ccc-------------------
Confidence 45699999999999999999999999999999999999997322 12221110 000
Q ss_pred cccccceEEEechhhhhhcchHHHHhhcCcceEEeecChhhHHHHHHHHhHc--CCEEEEEcCCccCHHHHhhCCceEEe
Q 001010 750 GLTDAHDLCIGGDCFEMLQQTSAVLRVIPYVKVFARVAPEQKELILTTFKAV--GRMTLMCGDGTNDVGALKQAHVGVAL 827 (1191)
Q Consensus 750 ~~~~~~~l~itG~~l~~l~~~~~~~~~l~~~~VfAR~sP~qK~~iV~~Lq~~--g~~V~m~GDG~ND~~ALk~AdVGIAl 827 (1191)
+++... .-+...-|.++|..+++. -..++|+|||+||.+|+.-||.=|+.
T Consensus 147 ----------gfd~~~------------------ptsdsggKa~~i~~lrk~~~~~~~~mvGDGatDlea~~pa~afi~~ 198 (227)
T KOG1615|consen 147 ----------GFDTNE------------------PTSDSGGKAEVIALLRKNYNYKTIVMVGDGATDLEAMPPADAFIGF 198 (227)
T ss_pred ----------ccccCC------------------ccccCCccHHHHHHHHhCCChheeEEecCCccccccCCchhhhhcc
Confidence 000000 001123689999999883 24799999999999999996665555
Q ss_pred c
Q 001010 828 L 828 (1191)
Q Consensus 828 ~ 828 (1191)
+
T Consensus 199 ~ 199 (227)
T KOG1615|consen 199 G 199 (227)
T ss_pred C
Confidence 4
|
|
| >PRK13582 thrH phosphoserine phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.90 E-value=6.6e-05 Score=81.03 Aligned_cols=102 Identities=20% Similarity=0.184 Sum_probs=78.1
Q ss_pred CcCCchhHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCC--CcEEEeecCCCceeeecCCCccccccCChHHHhc
Q 001010 673 CPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTK--PVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEG 750 (1191)
Q Consensus 673 d~lK~da~~~I~~L~~agi~vvMiTGDn~~TA~~VA~~~gI~~~--~~~il~~~~~~~~~~w~~~d~~~~~~~~~~~~~~ 750 (1191)
.++.|++.+.++.|+++ +++.++||-....+..+.+++|+..- +....+ .
T Consensus 67 ~~~~pg~~e~L~~L~~~-~~~~IvS~~~~~~~~~~l~~~gl~~~f~~~~~~~--~------------------------- 118 (205)
T PRK13582 67 LDPLPGAVEFLDWLRER-FQVVILSDTFYEFAGPLMRQLGWPTLFCHSLEVD--E------------------------- 118 (205)
T ss_pred CCCCCCHHHHHHHHHhc-CCEEEEeCCcHHHHHHHHHHcCCchhhcceEEEC--C-------------------------
Confidence 46789999999999999 99999999999999999999998410 000000 0
Q ss_pred ccccceEEEechhhhhhcchHHHHhhcCcceEEeecChhhHHHHHHHHhHcCCEEEEEcCCccCHHHHhhCCceEEec
Q 001010 751 LTDAHDLCIGGDCFEMLQQTSAVLRVIPYVKVFARVAPEQKELILTTFKAVGRMTLMCGDGTNDVGALKQAHVGVALL 828 (1191)
Q Consensus 751 ~~~~~~l~itG~~l~~l~~~~~~~~~l~~~~VfAR~sP~qK~~iV~~Lq~~g~~V~m~GDG~ND~~ALk~AdVGIAl~ 828 (1191)
+-.++|.. -..|+.|...++.++..+..++|+|||.||..|.++|++|+..+
T Consensus 119 -----~~~i~~~~---------------------~~~p~~k~~~l~~~~~~~~~~v~iGDs~~D~~~~~aa~~~v~~~ 170 (205)
T PRK13582 119 -----DGMITGYD---------------------LRQPDGKRQAVKALKSLGYRVIAAGDSYNDTTMLGEADAGILFR 170 (205)
T ss_pred -----CCeEECcc---------------------ccccchHHHHHHHHHHhCCeEEEEeCCHHHHHHHHhCCCCEEEC
Confidence 00011110 01377899999999888999999999999999999999999865
|
|
| >PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=97.88 E-value=0.00025 Score=80.26 Aligned_cols=41 Identities=10% Similarity=0.088 Sum_probs=37.6
Q ss_pred cCCchhHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCC
Q 001010 674 PIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIV 714 (1191)
Q Consensus 674 ~lK~da~~~I~~L~~agi~vvMiTGDn~~TA~~VA~~~gI~ 714 (1191)
.+-+.++++|++|++.||++++.||.....+..+++++|+.
T Consensus 24 ~i~~~~~~ai~~l~~~Gi~~viaTGR~~~~i~~~~~~l~~~ 64 (271)
T PRK03669 24 YDWQPAAPWLTRLREAQVPVILCSSKTAAEMLPLQQTLGLQ 64 (271)
T ss_pred cCcHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHhCCC
Confidence 35578999999999999999999999999999999999973
|
|
| >PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=97.88 E-value=0.00016 Score=81.89 Aligned_cols=43 Identities=14% Similarity=0.069 Sum_probs=39.2
Q ss_pred cCcCCchhHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCC
Q 001010 672 NCPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIV 714 (1191)
Q Consensus 672 ~d~lK~da~~~I~~L~~agi~vvMiTGDn~~TA~~VA~~~gI~ 714 (1191)
.+.+.++++++|+.|++.|++++++||.....+..+++++|+.
T Consensus 19 ~~~~~~~~~~ai~~l~~~Gi~~~iaTgR~~~~~~~~~~~l~l~ 61 (273)
T PRK00192 19 HTYSYEPAKPALKALKEKGIPVIPCTSKTAAEVEVLRKELGLE 61 (273)
T ss_pred CCcCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCC
Confidence 3456788999999999999999999999999999999999985
|
|
| >TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily | Back alignment and domain information |
|---|
Probab=97.87 E-value=0.0001 Score=82.69 Aligned_cols=42 Identities=12% Similarity=0.201 Sum_probs=38.8
Q ss_pred CcCCchhHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCC
Q 001010 673 CPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIV 714 (1191)
Q Consensus 673 d~lK~da~~~I~~L~~agi~vvMiTGDn~~TA~~VA~~~gI~ 714 (1191)
.++-+++.++|++|++.|++++++||++...+..+.+++|+.
T Consensus 15 ~~i~~~~~~~i~~l~~~G~~~~iaTGR~~~~~~~~~~~~~~~ 56 (256)
T TIGR00099 15 HTISPSTKEALAKLREKGIKVVLATGRPYKEVKNILKELGLD 56 (256)
T ss_pred CccCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCC
Confidence 357889999999999999999999999999999999999874
|
The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences. |
| >TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase | Back alignment and domain information |
|---|
Probab=97.78 E-value=6.3e-05 Score=79.71 Aligned_cols=114 Identities=15% Similarity=0.061 Sum_probs=77.2
Q ss_pred CcCCchhHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCcEEEeecCCCceeeecCCCccccccCChHHHhccc
Q 001010 673 CPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLT 752 (1191)
Q Consensus 673 d~lK~da~~~I~~L~~agi~vvMiTGDn~~TA~~VA~~~gI~~~~~~il~~~~~~~~~~w~~~d~~~~~~~~~~~~~~~~ 752 (1191)
.++++++.+.++.|++.|+++.++|+.+......+.+..|+.+.-..+++... .+.. ++
T Consensus 71 ~~l~~g~~~ll~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~i~~~~~-----~~~~-~g--------------- 129 (188)
T TIGR01489 71 APIDPGFKEFIAFIKEHGIDFIVISDGNDFFIDPVLEGIGEKDVFIEIYSNPA-----SFDN-DG--------------- 129 (188)
T ss_pred CCCCccHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHHcCChhheeEEeccCc-----eECC-CC---------------
Confidence 58899999999999999999999999999999999999998532112221100 0000 00
Q ss_pred ccceEEEechhhhhhcchHHHHhhcCcceEEee-cChhhHHHHHHHHhHc-CCEEEEEcCCccCHHHHhhCCceEE
Q 001010 753 DAHDLCIGGDCFEMLQQTSAVLRVIPYVKVFAR-VAPEQKELILTTFKAV-GRMTLMCGDGTNDVGALKQAHVGVA 826 (1191)
Q Consensus 753 ~~~~l~itG~~l~~l~~~~~~~~~l~~~~VfAR-~sP~qK~~iV~~Lq~~-g~~V~m~GDG~ND~~ALk~AdVGIA 826 (1191)
..++. ..++.++.. .....|..+++.+++. ...++|+|||.||..|.++||+-.|
T Consensus 130 -----~~~~~--------------~~~~~~~~~~~~g~~K~~~~~~~~~~~~~~~i~iGD~~~D~~aa~~~d~~~a 186 (188)
T TIGR01489 130 -----RHIVW--------------PHHCHGCCSCPCGCCKGKVIHKLSEPKYQHIIYIGDGVTDVCPAKLSDVVFA 186 (188)
T ss_pred -----cEEEe--------------cCCCCccCcCCCCCCHHHHHHHHHhhcCceEEEECCCcchhchHhcCCcccc
Confidence 00000 001112211 1123589999999887 8899999999999999999987544
|
Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact. |
| >TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like | Back alignment and domain information |
|---|
Probab=97.72 E-value=6.7e-05 Score=78.79 Aligned_cols=101 Identities=22% Similarity=0.267 Sum_probs=70.4
Q ss_pred cCCchhHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCcEEEeecCCCceeeecCCCccccccCChHHHhcccc
Q 001010 674 PIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLTD 753 (1191)
Q Consensus 674 ~lK~da~~~I~~L~~agi~vvMiTGDn~~TA~~VA~~~gI~~~~~~il~~~~~~~~~~w~~~d~~~~~~~~~~~~~~~~~ 753 (1191)
+++|++.+.++.+++.|++++++||.+...+..+++..|+.. ++.. .+.+ ++
T Consensus 73 ~~~~g~~~~l~~l~~~g~~~~ivS~~~~~~i~~~~~~~g~~~----~~~~-----~~~~---~~---------------- 124 (177)
T TIGR01488 73 ALRPGARELISWLKERGIDTVIVSGGFDFFVEPVAEKLGIDD----VFAN-----RLEF---DD---------------- 124 (177)
T ss_pred CcCcCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCch----heee-----eEEE---CC----------------
Confidence 468999999999999999999999999999999999999841 0000 0000 00
Q ss_pred cceEEEechhhhhhcchHHHHhhcCcceEEeecChhhHHHHHHHHhHc----CCEEEEEcCCccCHHHHhhC
Q 001010 754 AHDLCIGGDCFEMLQQTSAVLRVIPYVKVFARVAPEQKELILTTFKAV----GRMTLMCGDGTNDVGALKQA 821 (1191)
Q Consensus 754 ~~~l~itG~~l~~l~~~~~~~~~l~~~~VfAR~sP~qK~~iV~~Lq~~----g~~V~m~GDG~ND~~ALk~A 821 (1191)
+ -.++|+... . ....+..|..+++.+++. ...+.|+|||.||.+|++.|
T Consensus 125 ~--g~~~g~~~~---------------~--~~~~~~~K~~~l~~~~~~~~~~~~~~~~iGDs~~D~~~~~~a 177 (177)
T TIGR01488 125 N--GLLTGPIEG---------------Q--VNPEGECKGKVLKELLEESKITLKKIIAVGDSVNDLPMLKLA 177 (177)
T ss_pred C--CEEeCccCC---------------c--ccCCcchHHHHHHHHHHHhCCCHHHEEEEeCCHHHHHHHhcC
Confidence 0 011222100 0 124467899999887654 24699999999999999876
|
Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences. |
| >PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.70 E-value=4.9e-05 Score=80.86 Aligned_cols=94 Identities=16% Similarity=0.195 Sum_probs=68.5
Q ss_pred HHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCcEEEeecCCCceeeecCCCccccccCChHHHhcccccceEEEe
Q 001010 681 KILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLTDAHDLCIG 760 (1191)
Q Consensus 681 ~~I~~L~~agi~vvMiTGDn~~TA~~VA~~~gI~~~~~~il~~~~~~~~~~w~~~d~~~~~~~~~~~~~~~~~~~~l~it 760 (1191)
.+|+.|++.|+++.++||.+...+..+++++|+..
T Consensus 55 ~~i~~L~~~Gi~v~I~T~~~~~~v~~~l~~lgl~~--------------------------------------------- 89 (183)
T PRK09484 55 YGIRCLLTSGIEVAIITGRKSKLVEDRMTTLGITH--------------------------------------------- 89 (183)
T ss_pred HHHHHHHHCCCEEEEEeCCCcHHHHHHHHHcCCce---------------------------------------------
Confidence 69999999999999999999999999999999841
Q ss_pred chhhhhhcchHHHHhhcCcceEEeecChhhHHHHHHH-HhHcC---CEEEEEcCCccCHHHHhhCCceEEeccCCCcccc
Q 001010 761 GDCFEMLQQTSAVLRVIPYVKVFARVAPEQKELILTT-FKAVG---RMTLMCGDGTNDVGALKQAHVGVALLNAVPPTQS 836 (1191)
Q Consensus 761 G~~l~~l~~~~~~~~~l~~~~VfAR~sP~qK~~iV~~-Lq~~g---~~V~m~GDG~ND~~ALk~AdVGIAl~~~~~e~~~ 836 (1191)
+|. ..+.|...++. +++.| ..|+|+||+.||..|++.|+++++++++ .+..+
T Consensus 90 ---------------------~f~--g~~~k~~~l~~~~~~~gl~~~ev~~VGDs~~D~~~a~~aG~~~~v~~~-~~~~~ 145 (183)
T PRK09484 90 ---------------------LYQ--GQSNKLIAFSDLLEKLAIAPEQVAYIGDDLIDWPVMEKVGLSVAVADA-HPLLL 145 (183)
T ss_pred ---------------------eec--CCCcHHHHHHHHHHHhCCCHHHEEEECCCHHHHHHHHHCCCeEecCCh-hHHHH
Confidence 111 11234444433 33344 4699999999999999999999998743 33334
Q ss_pred ccCCccc
Q 001010 837 GNSSSEA 843 (1191)
Q Consensus 837 ~asdi~~ 843 (1191)
..++.+.
T Consensus 146 ~~a~~v~ 152 (183)
T PRK09484 146 PRADYVT 152 (183)
T ss_pred HhCCEEe
Confidence 4445444
|
|
| >PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=97.62 E-value=0.00026 Score=77.49 Aligned_cols=109 Identities=17% Similarity=0.217 Sum_probs=74.0
Q ss_pred CcCCchhHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCcEEEeecCCCceeeecCCCccccccCChHHHhccc
Q 001010 673 CPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLT 752 (1191)
Q Consensus 673 d~lK~da~~~I~~L~~agi~vvMiTGDn~~TA~~VA~~~gI~~~~~~il~~~~~~~~~~w~~~d~~~~~~~~~~~~~~~~ 752 (1191)
-+++|++.+.++.|++.|+++.++||-+...+..+.+.. +.. .. +...
T Consensus 73 ~~l~pG~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~-~~~-~~-i~~n----------------------------- 120 (219)
T PRK09552 73 AEIREGFHEFVQFVKENNIPFYVVSGGMDFFVYPLLQGL-IPK-EQ-IYCN----------------------------- 120 (219)
T ss_pred CCcCcCHHHHHHHHHHcCCeEEEECCCcHHHHHHHHHHh-CCc-Cc-EEEe-----------------------------
Confidence 378999999999999999999999999999999999988 643 11 2110
Q ss_pred ccceEEEechhhhhhcchHHHHhhcCcceE--E-eecChhhHHHHHHHHhHcCCEEEEEcCCccCHHHHhhCCceEE
Q 001010 753 DAHDLCIGGDCFEMLQQTSAVLRVIPYVKV--F-ARVAPEQKELILTTFKAVGRMTLMCGDGTNDVGALKQAHVGVA 826 (1191)
Q Consensus 753 ~~~~l~itG~~l~~l~~~~~~~~~l~~~~V--f-AR~sP~qK~~iV~~Lq~~g~~V~m~GDG~ND~~ALk~AdVGIA 826 (1191)
+...+|+.+..-. ++-.. + .++ ...|..+++.++.....+.|+|||.||..|.++||+.++
T Consensus 121 ---~~~~~~~~~~~~k---------p~p~~~~~~~~~-~~~K~~~l~~~~~~~~~~i~iGDs~~Di~aa~~Ag~~~a 184 (219)
T PRK09552 121 ---GSDFSGEYITITW---------PHPCDEHCQNHC-GCCKPSLIRKLSDTNDFHIVIGDSITDLEAAKQADKVFA 184 (219)
T ss_pred ---EEEecCCeeEEec---------cCCccccccccC-CCchHHHHHHhccCCCCEEEEeCCHHHHHHHHHCCccee
Confidence 0001111100000 00000 0 001 123778888888777789999999999999999999776
|
|
| >TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490 | Back alignment and domain information |
|---|
Probab=97.58 E-value=0.00026 Score=76.21 Aligned_cols=110 Identities=13% Similarity=0.074 Sum_probs=78.2
Q ss_pred cCcCCchhHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCcEEEeecCCCceeeecCCCccccccCChHHHhcc
Q 001010 672 NCPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGL 751 (1191)
Q Consensus 672 ~d~lK~da~~~I~~L~~agi~vvMiTGDn~~TA~~VA~~~gI~~~~~~il~~~~~~~~~~w~~~d~~~~~~~~~~~~~~~ 751 (1191)
..+++|++.+.|+.+++.|++++++||-....+..+++.+|+.. +++. .+..
T Consensus 85 ~~~~~~~~~~~l~~l~~~g~~v~ivS~s~~~~v~~~~~~lg~~~----~~~~-----~l~~------------------- 136 (202)
T TIGR01490 85 ESILYPEARDLIRWHKAEGHTIVLVSASLTILVKPLARILGIDN----AIGT-----RLEE------------------- 136 (202)
T ss_pred HHhccHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCCcc----eEec-----ceEE-------------------
Confidence 45789999999999999999999999999999999999999841 1100 0000
Q ss_pred cccceEEEechhhhhhcchHHHHhhcCcceEEeecChhhHHHHHHHHhH-cCC---EEEEEcCCccCHHHHhhCCceEEe
Q 001010 752 TDAHDLCIGGDCFEMLQQTSAVLRVIPYVKVFARVAPEQKELILTTFKA-VGR---MTLMCGDGTNDVGALKQAHVGVAL 827 (1191)
Q Consensus 752 ~~~~~l~itG~~l~~l~~~~~~~~~l~~~~VfAR~sP~qK~~iV~~Lq~-~g~---~V~m~GDG~ND~~ALk~AdVGIAl 827 (1191)
..+-..+|+... -.+.++.|...++.+.+ .|. .+.++||+.||.++++.|+.++++
T Consensus 137 --~~~g~~~g~~~~------------------~~~~g~~K~~~l~~~~~~~~~~~~~~~~~gDs~~D~~~~~~a~~~~~v 196 (202)
T TIGR01490 137 --SEDGIYTGNIDG------------------NNCKGEGKVHALAELLAEEQIDLKDSYAYGDSISDLPLLSLVGHPYVV 196 (202)
T ss_pred --cCCCEEeCCccC------------------CCCCChHHHHHHHHHHHHcCCCHHHcEeeeCCcccHHHHHhCCCcEEe
Confidence 000012222110 12346778887776644 443 689999999999999999999988
Q ss_pred cc
Q 001010 828 LN 829 (1191)
Q Consensus 828 ~~ 829 (1191)
..
T Consensus 197 ~~ 198 (202)
T TIGR01490 197 NP 198 (202)
T ss_pred CC
Confidence 74
|
A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog. |
| >TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase | Back alignment and domain information |
|---|
Probab=97.48 E-value=0.00089 Score=73.68 Aligned_cols=43 Identities=12% Similarity=0.130 Sum_probs=38.8
Q ss_pred cCcCCchhHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCC
Q 001010 672 NCPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIV 714 (1191)
Q Consensus 672 ~d~lK~da~~~I~~L~~agi~vvMiTGDn~~TA~~VA~~~gI~ 714 (1191)
.+..-++++++|++|++.|++++++||..+..+.++.+++|+.
T Consensus 13 ~~~~~~~~~~ai~~l~~~G~~~vi~TgR~~~~~~~~~~~lg~~ 55 (225)
T TIGR02461 13 PGYEPGPAREALEELKDLGFPIVFVSSKTRAEQEYYREELGVE 55 (225)
T ss_pred CCCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCC
Confidence 4455668999999999999999999999999999999999974
|
Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles. |
| >PF12409 P5-ATPase: P5-type ATPase cation transporter | Back alignment and domain information |
|---|
Probab=97.47 E-value=0.00017 Score=71.02 Aligned_cols=56 Identities=20% Similarity=0.119 Sum_probs=47.8
Q ss_pred hHHHHHHHHHHHHhhcccChhhhheeeeccCCCcCCCcEEEEEeCCCCCceeeEEeeee
Q 001010 54 VLGGLVAFHILVWLFTAWSVDFKCFAHYSKINDIHLADACKITPVKFCGSKEVVPLQFW 112 (1191)
Q Consensus 54 ~~~~~~~~~~l~~l~~~W~~~~~~~~~~~~~~~~~~a~~~~v~~~~~~~~~~~~~~~~~ 112 (1191)
+.++.++..|+++|++||+++|+.+++|++| ++++||||+|+. ..|..++++++..
T Consensus 20 ~~~l~ilT~Gll~L~~~W~p~~~~~~~~~~c-~l~~A~~vlI~~--~~~~~~i~~v~~~ 75 (119)
T PF12409_consen 20 YYFLCILTLGLLYLVFRWFPKWWLKLTFKKC-SLEEADHVLIED--QDGEYEIVKVQKI 75 (119)
T ss_pred HHHHHHHHHHHHHHHHhhHHHhheeeeEeEC-CHHHCcEEEEEe--CCCCEEEEEEEEE
Confidence 3445566789999999999999999999998 699999999986 4788899999863
|
|
| >TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein | Back alignment and domain information |
|---|
Probab=97.42 E-value=0.002 Score=70.55 Aligned_cols=39 Identities=15% Similarity=0.245 Sum_probs=36.0
Q ss_pred CchhHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCC
Q 001010 676 REDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIV 714 (1191)
Q Consensus 676 K~da~~~I~~L~~agi~vvMiTGDn~~TA~~VA~~~gI~ 714 (1191)
-+.++++|+.|++.|++++++||.....+..+.+++|+.
T Consensus 18 ~~~~~~~l~~l~~~gi~~~i~TgR~~~~~~~~~~~l~~~ 56 (221)
T TIGR02463 18 WQPAAPWLTRLQEAGIPVILCTSKTAAEVEYLQKALGLT 56 (221)
T ss_pred cHHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCC
Confidence 345899999999999999999999999999999999974
|
This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate. |
| >PLN02954 phosphoserine phosphatase | Back alignment and domain information |
|---|
Probab=97.40 E-value=0.00064 Score=74.47 Aligned_cols=41 Identities=15% Similarity=0.251 Sum_probs=38.9
Q ss_pred cCCchhHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCC
Q 001010 674 PIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIV 714 (1191)
Q Consensus 674 ~lK~da~~~I~~L~~agi~vvMiTGDn~~TA~~VA~~~gI~ 714 (1191)
+++|++.++++.|++.|+++.++||.....+..+++.+|+.
T Consensus 84 ~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~~l~~~gi~ 124 (224)
T PLN02954 84 RLSPGIPELVKKLRARGTDVYLVSGGFRQMIAPVAAILGIP 124 (224)
T ss_pred CCCccHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHhCCC
Confidence 47899999999999999999999999999999999999985
|
|
| >TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial | Back alignment and domain information |
|---|
Probab=97.35 E-value=0.00034 Score=77.46 Aligned_cols=54 Identities=30% Similarity=0.334 Sum_probs=44.4
Q ss_pred cChh--hHHHHHHHHhH-cCC---EEEEEcCCccCHHHHhhCCceEEeccCCCccccccC
Q 001010 786 VAPE--QKELILTTFKA-VGR---MTLMCGDGTNDVGALKQAHVGVALLNAVPPTQSGNS 839 (1191)
Q Consensus 786 ~sP~--qK~~iV~~Lq~-~g~---~V~m~GDG~ND~~ALk~AdVGIAl~~~~~e~~~~as 839 (1191)
..|. .|...++.|.+ .|. .++++||+.||.+||+.|+.||+|+++.+++++.+.
T Consensus 153 i~~~~~~K~~al~~l~~~~g~~~~~~i~~GD~~nD~~ml~~~~~~iav~na~~~~k~~a~ 212 (236)
T TIGR02471 153 VLPLRASKGLALRYLSYRWGLPLEQILVAGDSGNDEEMLRGLTLGVVVGNHDPELEGLRH 212 (236)
T ss_pred EeeCCCChHHHHHHHHHHhCCCHHHEEEEcCCccHHHHHcCCCcEEEEcCCcHHHHHhhc
Confidence 4443 79999998866 342 589999999999999999999999998888766655
|
Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472. |
| >cd01427 HAD_like Haloacid dehalogenase-like hydrolases | Back alignment and domain information |
|---|
Probab=97.34 E-value=0.0007 Score=66.75 Aligned_cols=118 Identities=18% Similarity=0.117 Sum_probs=78.7
Q ss_pred cccCcCCchhHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCcEEEeecCCCceeeecCCCccccccCChHHHh
Q 001010 670 VFNCPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVE 749 (1191)
Q Consensus 670 ~~~d~lK~da~~~I~~L~~agi~vvMiTGDn~~TA~~VA~~~gI~~~~~~il~~~~~~~~~~w~~~d~~~~~~~~~~~~~ 749 (1191)
.-..++.+++.+.++.|++.|++++++||.+...+..+.+.+|+......++....... ..+.. .
T Consensus 20 ~~~~~~~~~~~~~l~~l~~~g~~i~ivS~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~--~------------ 84 (139)
T cd01427 20 IEELELYPGVKEALKELKEKGIKLALATNKSRREVLELLEELGLDDYFDPVITSNGAAI-YYPKE--G------------ 84 (139)
T ss_pred cccCCcCcCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHHHcCCchhhhheeccchhhh-hcccc--c------------
Confidence 34558899999999999999999999999999999999999998422222221100000 00000 0
Q ss_pred cccccceEEEechhhhhhcchHHHHhhcCcceEEeecChhhHHHHHHHHhHcCCEEEEEcCCccCHHHHhh-CCceEE
Q 001010 750 GLTDAHDLCIGGDCFEMLQQTSAVLRVIPYVKVFARVAPEQKELILTTFKAVGRMTLMCGDGTNDVGALKQ-AHVGVA 826 (1191)
Q Consensus 750 ~~~~~~~l~itG~~l~~l~~~~~~~~~l~~~~VfAR~sP~qK~~iV~~Lq~~g~~V~m~GDG~ND~~ALk~-AdVGIA 826 (1191)
.........+.+-.|+.+..+.+.+......++|+||+.||+.|++. +.-+|+
T Consensus 85 ------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~igD~~~d~~~~~~~g~~~i~ 138 (139)
T cd01427 85 ------------------------LFLGGGPFDIGKPNPDKLLAALKLLGVDPEEVLMVGDSLNDIEMAKAAGGLGVA 138 (139)
T ss_pred ------------------------ccccccccccCCCCHHHHHHHHHHcCCChhhEEEeCCCHHHHHHHHHcCCceee
Confidence 00001112445566777777777776666789999999999999998 444554
|
The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases. |
| >PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.23 E-value=0.0039 Score=77.26 Aligned_cols=40 Identities=13% Similarity=0.058 Sum_probs=36.6
Q ss_pred CCchhHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCC
Q 001010 675 IREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIV 714 (1191)
Q Consensus 675 lK~da~~~I~~L~~agi~vvMiTGDn~~TA~~VA~~~gI~ 714 (1191)
.-+.++++|++|+++|+.+++.||.....+..+++++|+.
T Consensus 434 i~~~t~eAL~~L~ekGI~~VIATGRs~~~i~~l~~~Lgl~ 473 (694)
T PRK14502 434 SYSTALDALRLLKDKELPLVFCSAKTMGEQDLYRNELGIK 473 (694)
T ss_pred cCHHHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCCC
Confidence 4467899999999999999999999999999999999973
|
|
| >COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.20 E-value=0.00041 Score=69.61 Aligned_cols=94 Identities=17% Similarity=0.170 Sum_probs=72.6
Q ss_pred HHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCcEEEeecCCCceeeecCCCccccccCChHHHhcccccceEEEe
Q 001010 681 KILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLTDAHDLCIG 760 (1191)
Q Consensus 681 ~~I~~L~~agi~vvMiTGDn~~TA~~VA~~~gI~~~~~~il~~~~~~~~~~w~~~d~~~~~~~~~~~~~~~~~~~~l~it 760 (1191)
-.|+.|.++|+++.+|||.+......=|+++||-.
T Consensus 42 ~Gik~l~~~Gi~vAIITGr~s~ive~Ra~~LGI~~--------------------------------------------- 76 (170)
T COG1778 42 HGIKLLLKSGIKVAIITGRDSPIVEKRAKDLGIKH--------------------------------------------- 76 (170)
T ss_pred HHHHHHHHcCCeEEEEeCCCCHHHHHHHHHcCCce---------------------------------------------
Confidence 37899999999999999999999999999999930
Q ss_pred chhhhhhcchHHHHhhcCcceEEeecChhhHHHHHHHHhHc-C---CEEEEEcCCccCHHHHhhCCceEEeccCCCcccc
Q 001010 761 GDCFEMLQQTSAVLRVIPYVKVFARVAPEQKELILTTFKAV-G---RMTLMCGDGTNDVGALKQAHVGVALLNAVPPTQS 836 (1191)
Q Consensus 761 G~~l~~l~~~~~~~~~l~~~~VfAR~sP~qK~~iV~~Lq~~-g---~~V~m~GDG~ND~~ALk~AdVGIAl~~~~~e~~~ 836 (1191)
+| .--++|....+.|.+. + ..|+++||-.||-|+|++...+++..++.++++.
T Consensus 77 ---------------------~~--qG~~dK~~a~~~L~~~~~l~~e~~ayiGDD~~Dlpvm~~vGls~a~~dAh~~v~~ 133 (170)
T COG1778 77 ---------------------LY--QGISDKLAAFEELLKKLNLDPEEVAYVGDDLVDLPVMEKVGLSVAVADAHPLLKQ 133 (170)
T ss_pred ---------------------ee--echHhHHHHHHHHHHHhCCCHHHhhhhcCccccHHHHHHcCCcccccccCHHHHH
Confidence 11 1124566666655542 2 4699999999999999999999999988777654
Q ss_pred ccCCcc
Q 001010 837 GNSSSE 842 (1191)
Q Consensus 837 ~asdi~ 842 (1191)
.+..++
T Consensus 134 ~a~~Vt 139 (170)
T COG1778 134 RADYVT 139 (170)
T ss_pred hhHhhh
Confidence 444433
|
|
| >PLN02382 probable sucrose-phosphatase | Back alignment and domain information |
|---|
Probab=97.15 E-value=0.0021 Score=77.05 Aligned_cols=158 Identities=19% Similarity=0.158 Sum_probs=90.5
Q ss_pred hhHHHH-HHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCcEEEeecCCCcee----------eecCCCccccccCCh-
Q 001010 678 DSAKIL-SELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLILCPVKNGKVY----------EWVSPDETEKIQYSE- 745 (1191)
Q Consensus 678 da~~~I-~~L~~agi~vvMiTGDn~~TA~~VA~~~gI~~~~~~il~~~~~~~~~----------~w~~~d~~~~~~~~~- 745 (1191)
....++ +++++.|+..+..||..+..+..+.++.++...+..|.. +|..+ .|...-+..-.....
T Consensus 32 ~~~~~l~~~~~~~gi~fv~aTGR~~~~~~~l~~~~~l~~p~~~I~~---nGt~I~~~~~~~~d~~w~~~l~~~w~~~~v~ 108 (413)
T PLN02382 32 LRFNALWEAEYRHDSLLVFSTGRSPTLYKELRKEKPLLTPDITIMS---VGTEIAYGESMVPDHGWVEYLNKKWDREIVV 108 (413)
T ss_pred HHHHHHHHHhhcCCeeEEEEcCCCHHHHHHHHHhCCCCCCCEEEEc---CCcEEEeCCCCccChhHHHHHhccCChhhHH
Confidence 344555 889999999999999999999999999998754433321 11111 121100000000000
Q ss_pred HHHhcc----------cccceEEEechh--hhhhcchHHHHhhcC----cce------EEeecChh--hHHHHHHHHhHc
Q 001010 746 KEVEGL----------TDAHDLCIGGDC--FEMLQQTSAVLRVIP----YVK------VFARVAPE--QKELILTTFKAV 801 (1191)
Q Consensus 746 ~~~~~~----------~~~~~l~itG~~--l~~l~~~~~~~~~l~----~~~------VfAR~sP~--qK~~iV~~Lq~~ 801 (1191)
..+..+ ...+.+.+..+. ...+. ..+.+.+. ++. -+-.+.|. .|..-|+.|.+.
T Consensus 109 ~~~~~~~~l~~q~~~~~~~~Ki~~~~~~~~~~~~~--~~l~~~~~~~g~~~~i~~s~~~~ldI~p~g~sKg~Al~~L~~~ 186 (413)
T PLN02382 109 EETSKFPELKLQPETEQRPHKVSFYVDKKKAQEVI--KELSERLEKRGLDVKIIYSGGIDLDVLPQGAGKGQALAYLLKK 186 (413)
T ss_pred HHHhcCCCcccCCcccCCCeEEEEEechHHhHHHH--HHHHHHHHhcCCcEEEEEECCcEEEEEeCCCCHHHHHHHHHHH
Confidence 000000 112233333221 11111 12222221 122 13345564 599999888764
Q ss_pred ----C---CEEEEEcCCccCHHHHhhCC-ceEEeccCCCccccccCC
Q 001010 802 ----G---RMTLMCGDGTNDVGALKQAH-VGVALLNAVPPTQSGNSS 840 (1191)
Q Consensus 802 ----g---~~V~m~GDG~ND~~ALk~Ad-VGIAl~~~~~e~~~~asd 840 (1191)
| ..|+.+||+.||.+||+.|+ .||+|+|+.+++++.+++
T Consensus 187 ~~~~gi~~~~~iafGDs~NDleMl~~ag~~gvam~NA~~elk~~a~~ 233 (413)
T PLN02382 187 LKAEGKAPVNTLVCGDSGNDAELFSVPDVYGVMVSNAQEELLQWYAE 233 (413)
T ss_pred hhhcCCChhcEEEEeCCHHHHHHHhcCCCCEEEEcCCcHHHHHHHHh
Confidence 3 37899999999999999999 699999998887665433
|
|
| >KOG4383 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=97.15 E-value=0.015 Score=69.70 Aligned_cols=314 Identities=15% Similarity=0.190 Sum_probs=171.5
Q ss_pred cCeEEeeeecccCcCCchhHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCC-C-cEEEeecCC--Cc--------
Q 001010 661 NGLTFAGFAVFNCPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTK-P-VLILCPVKN--GK-------- 728 (1191)
Q Consensus 661 ~dL~flG~l~~~d~lK~da~~~I~~L~~agi~vvMiTGDn~~TA~~VA~~~gI~~~-~-~~il~~~~~--~~-------- 728 (1191)
++-.|.|++..+-+.++|....|+.|-++-||.+-.+-.+.+...-.|.++||-.. + ..-+.+.++ +.
T Consensus 813 sGQIf~GlVs~~Yea~ldiVriIdgL~naCiRfVYFS~EdELkSkVFAEKlGiEaGWNCHISLa~~~d~Pg~e~~pa~~q 892 (1354)
T KOG4383|consen 813 SGQIFCGLVSLHYEAILDIVRIIDGLDNACIRFVYFSKEDELKSKVFAEKLGIEAGWNCHISLAEEEDAPGREAGPAHEQ 892 (1354)
T ss_pred ccchhhhhhhhhccchhhHHHHHHHhhhhheeeeeecchHHHHHHHHHHHhccccccceeEEeccCCCCCcccCCCCChh
Confidence 56789999999999999999999999999999999999999999999999999621 1 122221111 00
Q ss_pred ----------eeeecCCCccccccCChHHHhcccccceEEEechhhhhhcchHH-----------------HHhhcCcce
Q 001010 729 ----------VYEWVSPDETEKIQYSEKEVEGLTDAHDLCIGGDCFEMLQQTSA-----------------VLRVIPYVK 781 (1191)
Q Consensus 729 ----------~~~w~~~d~~~~~~~~~~~~~~~~~~~~l~itG~~l~~l~~~~~-----------------~~~~l~~~~ 781 (1191)
.++-...|+.+...++-++... +...+--+......+.+..+ +.+.-.-+-
T Consensus 893 ~a~qkpSlhddlnqia~ddaeg~lL~~Eeg~~--dliSfq~~dsdi~kf~ed~N~AkLPrGihnVRPHL~~iDNVPLLV~ 970 (1354)
T KOG4383|consen 893 FAAQKPSLHDDLNQIALDDAEGELLDCEEGAR--DLISFQKMDSDIAKFAEDPNIAKLPRGIHNVRPHLDEIDNVPLLVG 970 (1354)
T ss_pred hhccCcchhHHHHHhhhcccccceeehhhccc--CCccccccccchhhhcCCCchhhcCcchhhcCcccccccCcceeee
Confidence 0000111111110000000000 00000000000111111111 111111234
Q ss_pred EEeecChhhHHHHHHHHhHcCCEEEEEcCCccCHH--HHhhCCceEEeccCCCccccccCCcccccccchhhhhcccccc
Q 001010 782 VFARVAPEQKELILTTFKAVGRMTLMCGDGTNDVG--ALKQAHVGVALLNAVPPTQSGNSSSEASKDENTKSVKSKKSKS 859 (1191)
Q Consensus 782 VfAR~sP~qK~~iV~~Lq~~g~~V~m~GDG~ND~~--ALk~AdVGIAl~~~~~e~~~~asdi~~~~~~~~~~~~~~~~~~ 859 (1191)
.|..++|+--.+.|+.+|+.|.+|+..|--+|--. -.-+||++|++-.-.+.... |...
T Consensus 971 LFTDcnpeamcEMIeIMQE~GEVtcclGS~aN~rNSciflkadISialD~l~~~~C~-------------------~e~f 1031 (1354)
T KOG4383|consen 971 LFTDCNPEAMCEMIEIMQENGEVTCCLGSCANARNSCIFLKADISIALDDLEEPACR-------------------LEDF 1031 (1354)
T ss_pred eccCCCHHHHHHHHHHHHHcCcEEEEeccccccccceEEEccceeEEeccCCCccce-------------------eccc
Confidence 79999999999999999999999999999877432 34569999998743221100 0000
Q ss_pred chhhhhhhhccCCCCCCccchhhhhhhcccccccccchHHHHHHHHHHHHHHHHhhcCCCCCCCccccCcccccCCCccC
Q 001010 860 ASEAASKAMSLNSEGTSKGKASARLEANSRTAGNRHLTAAEMQREKLKKMMEELNEEGDGRSAPIVKLGDASMASPFTAK 939 (1191)
Q Consensus 860 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~klgdASiaaPFtsk 939 (1191)
.-. + .-+|....++-.+-++.--=-+.|..|+-.
T Consensus 1032 g~a------------s----------------------------------sismaqandglsplQiSgqLnaL~c~~~f~ 1065 (1354)
T KOG4383|consen 1032 GVA------------S----------------------------------SISMAQANDGLSPLQISGQLNALACDFRFD 1065 (1354)
T ss_pred ccc------------h----------------------------------hhhhhhhcCCCCceeecccccccccccchh
Confidence 000 0 000111111111111111234667788887
Q ss_pred cCCccchhhhhhccchHHHHHHhhhHHHH----HHHHHHHHHHHHhhhccccccchHHHHHhHHH-HHHHH--HhhccCC
Q 001010 940 HASVAPTTDIIRQGRSTLVTTLQMFKILG----LNCLATAYVLSVMYLDGVKLGDVQATISGVFT-AAFFL--FISHARP 1012 (1191)
Q Consensus 940 ~~~i~~v~~iir~GR~~Lvtt~~~fk~l~----l~~li~~~s~svly~~g~~~~d~Q~~~~~~l~-~~~~~--~~s~~~p 1012 (1191)
.-..-.+..+|.+.|-+...--.+|-|+- +++.|++ +|.++.--.-|+-.|.++...+- -+.|+ .++...|
T Consensus 1066 ~ee~ikiirLIe~ARHa~~g~R~cfLFiLq~qL~l~Vi~f--lSc~~~LP~i~s~sdii~lScfc~PlL~i~tL~gk~~h 1143 (1354)
T KOG4383|consen 1066 HEELIKIIRLIECARHAMSGFRHCFLFILQAQLLLSVIIF--LSCFFFLPIIFSHSDIILLSCFCIPLLFIGTLFGKFEH 1143 (1354)
T ss_pred HHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHH--HHHHHhccchhccchHHHHHHHHHHHHHHHHHhcCCCc
Confidence 77777888899899987766555555532 3455554 45566777778888887766543 22332 1233333
Q ss_pred CCccccCCCC-----CCccchhhHHHHHHHHHHHHH
Q 001010 1013 LPTLSAARPH-----PNIFCSYVFLSLMGQFAIHLF 1043 (1191)
Q Consensus 1013 ~~~Ls~~rP~-----~~if~~~~~~si~~Q~~i~~~ 1043 (1191)
...++..-|- +.-=-.|.++-.++||.....
T Consensus 1144 kSii~maagKNlqeIPKk~kh~fllcFilkFsls~s 1179 (1354)
T KOG4383|consen 1144 KSIIIMAAGKNLQEIPKKEKHKFLLCFILKFSLSAS 1179 (1354)
T ss_pred cceEEeeccCChhhcccHHHHHHHHHHHHHhhhhHH
Confidence 3333333222 111224666677777765443
|
|
| >TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase | Back alignment and domain information |
|---|
Probab=97.15 E-value=0.0013 Score=73.47 Aligned_cols=159 Identities=18% Similarity=0.198 Sum_probs=91.9
Q ss_pred cCcCCchhHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCcEEEeecCCCceeeecC---CCccc----cccCC
Q 001010 672 NCPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLILCPVKNGKVYEWVS---PDETE----KIQYS 744 (1191)
Q Consensus 672 ~d~lK~da~~~I~~L~~agi~vvMiTGDn~~TA~~VA~~~gI~~~~~~il~~~~~~~~~~w~~---~d~~~----~~~~~ 744 (1191)
..+..|...++|+++++.|+.++.+||........+.+++++...+ .++. .+|..+.+.. .+... .....
T Consensus 19 ~~~~~~~~~~~i~~~~~~gi~fv~aTGR~~~~~~~~~~~~~~~~p~-~~I~--~NGa~I~~~~~~~~~~~~~~~~~~~~~ 95 (249)
T TIGR01485 19 DNQALLRLNALLEDHRGEDSLLVYSTGRSPHSYKELQKQKPLLTPD-IWVT--SVGSEIYYGGAEVPDQHWAEYLSEKWQ 95 (249)
T ss_pred ChHHHHHHHHHHHHhhccCceEEEEcCCCHHHHHHHHhcCCCCCCC-EEEE--cCCceEEeCCCCcCCHHHHHHHhcccC
Confidence 4567799999999999999999999999999999999999986433 3332 1222222110 00000 00000
Q ss_pred hHHHh-------c-------ccccceEEEech--hhhhhcchHHHHhhcC----cceE-Ee-----ecCh--hhHHHHHH
Q 001010 745 EKEVE-------G-------LTDAHDLCIGGD--CFEMLQQTSAVLRVIP----YVKV-FA-----RVAP--EQKELILT 796 (1191)
Q Consensus 745 ~~~~~-------~-------~~~~~~l~itG~--~l~~l~~~~~~~~~l~----~~~V-fA-----R~sP--~qK~~iV~ 796 (1191)
...+. . ....+.+++-.. ....+. ..+.+.+. .+.+ ++ ...| ..|..-++
T Consensus 96 ~~~~~~~~~~~~~l~~~~~~~~~~~k~~~~~~~~~~~~~~--~~l~~~l~~~~~~~~~~~~~~~~ldi~~~~~~K~~al~ 173 (249)
T TIGR01485 96 RDIVVAITDKFEELKPQPDLEQRPHKVSFFLDPEAAPEVI--KQLTEMLKETGLDVKLIYSSGKDLDILPQGSGKGQALQ 173 (249)
T ss_pred HHHHHHHHhcCcccccCCccccCCeeEEEEechhhhhHHH--HHHHHHHHhcCCCEEEEEECCceEEEEeCCCChHHHHH
Confidence 00000 0 001122222221 111111 11121111 1211 11 2344 47998898
Q ss_pred HHhHc-C---CEEEEEcCCccCHHHHhh-CCceEEeccCCCccc
Q 001010 797 TFKAV-G---RMTLMCGDGTNDVGALKQ-AHVGVALLNAVPPTQ 835 (1191)
Q Consensus 797 ~Lq~~-g---~~V~m~GDG~ND~~ALk~-AdVGIAl~~~~~e~~ 835 (1191)
.|.+. | ..|+++||+.||.+|++. +..||+|+|+.++++
T Consensus 174 ~l~~~~~i~~~~~i~~GD~~ND~~ml~~~~~~~va~~na~~~~k 217 (249)
T TIGR01485 174 YLLQKLAMEPSQTLVCGDSGNDIELFEIGSVRGVIVSNAQEELL 217 (249)
T ss_pred HHHHHcCCCccCEEEEECChhHHHHHHccCCcEEEECCCHHHHH
Confidence 88663 3 579999999999999998 679999999877654
|
Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain. |
| >COG0546 Gph Predicted phosphatases [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.95 E-value=0.0037 Score=68.48 Aligned_cols=117 Identities=21% Similarity=0.199 Sum_probs=80.4
Q ss_pred cCcCCchhHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCcEEEeecCCCceeeecCCCccccccCChHHHhcc
Q 001010 672 NCPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGL 751 (1191)
Q Consensus 672 ~d~lK~da~~~I~~L~~agi~vvMiTGDn~~TA~~VA~~~gI~~~~~~il~~~~~~~~~~w~~~d~~~~~~~~~~~~~~~ 751 (1191)
..++=|++++++..|+++|++..++|+++...+..+.+..|+.+-=..+.+
T Consensus 87 ~~~~~~gv~e~L~~L~~~g~~l~i~T~k~~~~~~~~l~~~gl~~~F~~i~g----------------------------- 137 (220)
T COG0546 87 ESRLFPGVKELLAALKSAGYKLGIVTNKPERELDILLKALGLADYFDVIVG----------------------------- 137 (220)
T ss_pred cCccCCCHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHhCCccccceEEc-----------------------------
Confidence 457789999999999999999999999999999999999999632111111
Q ss_pred cccceEEEechhhhhhcchHHHHhhcCcceEEeecChhhHHHHHHHHhHcCCEEEEEcCCccCHHHHhhCC---ceEEec
Q 001010 752 TDAHDLCIGGDCFEMLQQTSAVLRVIPYVKVFARVAPEQKELILTTFKAVGRMTLMCGDGTNDVGALKQAH---VGVALL 828 (1191)
Q Consensus 752 ~~~~~l~itG~~l~~l~~~~~~~~~l~~~~VfAR~sP~qK~~iV~~Lq~~g~~V~m~GDG~ND~~ALk~Ad---VGIAl~ 828 (1191)
|... -...=.|+....+++.+......++|+||..||..|=|+|+ |||..+
T Consensus 138 ---------~~~~-----------------~~~KP~P~~l~~~~~~~~~~~~~~l~VGDs~~Di~aA~~Ag~~~v~v~~g 191 (220)
T COG0546 138 ---------GDDV-----------------PPPKPDPEPLLLLLEKLGLDPEEALMVGDSLNDILAAKAAGVPAVGVTWG 191 (220)
T ss_pred ---------CCCC-----------------CCCCcCHHHHHHHHHHhCCChhheEEECCCHHHHHHHHHcCCCEEEEECC
Confidence 1110 00111355555555555444346999999999999999998 677776
Q ss_pred cC-CCccccccCCccc
Q 001010 829 NA-VPPTQSGNSSSEA 843 (1191)
Q Consensus 829 ~~-~~e~~~~asdi~~ 843 (1191)
.. .++.....+|.+.
T Consensus 192 ~~~~~~l~~~~~d~vi 207 (220)
T COG0546 192 YNSREELAQAGADVVI 207 (220)
T ss_pred CCCCcchhhcCCCEEE
Confidence 53 2333444455444
|
|
| >PRK13222 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=96.95 E-value=0.005 Score=67.28 Aligned_cols=100 Identities=21% Similarity=0.247 Sum_probs=70.9
Q ss_pred CcCCchhHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCcEEEeecCCCceeeecCCCccccccCChHHHhccc
Q 001010 673 CPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLT 752 (1191)
Q Consensus 673 d~lK~da~~~I~~L~~agi~vvMiTGDn~~TA~~VA~~~gI~~~~~~il~~~~~~~~~~w~~~d~~~~~~~~~~~~~~~~ 752 (1191)
.++.|++.+.++.|++.|+++.++||.....+..+.+..|+...-.
T Consensus 92 ~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~---------------------------------- 137 (226)
T PRK13222 92 SRLYPGVKETLAALKAAGYPLAVVTNKPTPFVAPLLEALGIADYFS---------------------------------- 137 (226)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCccCcc----------------------------------
Confidence 5688999999999999999999999999999999999999842111
Q ss_pred ccceEEEechhhhhhcchHHHHhhcCcceEEeecCh--hhHHHHHHHHhHcCCEEEEEcCCccCHHHHhhCCc-eEEecc
Q 001010 753 DAHDLCIGGDCFEMLQQTSAVLRVIPYVKVFARVAP--EQKELILTTFKAVGRMTLMCGDGTNDVGALKQAHV-GVALLN 829 (1191)
Q Consensus 753 ~~~~l~itG~~l~~l~~~~~~~~~l~~~~VfAR~sP--~qK~~iV~~Lq~~g~~V~m~GDG~ND~~ALk~AdV-GIAl~~ 829 (1191)
.+++++. +.+..| +--..+++.++.....++|+||+.||+.|.++|++ +|.+..
T Consensus 138 ----~~~~~~~-------------------~~~~kp~~~~~~~~~~~~~~~~~~~i~igD~~~Di~~a~~~g~~~i~v~~ 194 (226)
T PRK13222 138 ----VVIGGDS-------------------LPNKKPDPAPLLLACEKLGLDPEEMLFVGDSRNDIQAARAAGCPSVGVTY 194 (226)
T ss_pred ----EEEcCCC-------------------CCCCCcChHHHHHHHHHcCCChhheEEECCCHHHHHHHHHCCCcEEEECc
Confidence 1111111 111223 22233444444445679999999999999999998 566553
|
|
| >PRK10187 trehalose-6-phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=96.91 E-value=0.0074 Score=68.15 Aligned_cols=155 Identities=14% Similarity=0.146 Sum_probs=85.2
Q ss_pred cCCchhHHHHHHHHh-cCCcEEEEcCCCHHHHHHHHHHcCCC---CCCcEEEeecCCCceeeecCCCccccccCChHHHh
Q 001010 674 PIREDSAKILSELKN-SSQDLAMITGDQALTACYVASQVHIV---TKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVE 749 (1191)
Q Consensus 674 ~lK~da~~~I~~L~~-agi~vvMiTGDn~~TA~~VA~~~gI~---~~~~~il~~~~~~~~~~w~~~d~~~~~~~~~~~~~ 749 (1191)
.+-++++++|+.|++ .|++++++||.....+..+.+++++. .+...+.+. ++ .+.+..++....... ...+.
T Consensus 36 ~i~~~~~~~L~~L~~~~g~~v~i~SGR~~~~~~~~~~~~~~~~i~~nGa~i~~~--~~-~~~~~~l~~~~~~~i-~~~l~ 111 (266)
T PRK10187 36 VVPDNILQGLQLLATANDGALALISGRSMVELDALAKPYRFPLAGVHGAERRDI--NG-KTHIVHLPDAIARDI-SVQLH 111 (266)
T ss_pred cCCHHHHHHHHHHHhCCCCcEEEEeCCCHHHHHHhcCcccceEEEeCCCeeecC--CC-CeeeccCChhHHHHH-HHHHH
Confidence 456899999999998 79999999999999999888877642 122222111 11 111111111000000 00000
Q ss_pred cc----------cccceEEEechhhhh----hcch-HHHHhhcCcc-----eEEeecChh--hHHHHHHHHhH-cC---C
Q 001010 750 GL----------TDAHDLCIGGDCFEM----LQQT-SAVLRVIPYV-----KVFARVAPE--QKELILTTFKA-VG---R 803 (1191)
Q Consensus 750 ~~----------~~~~~l~itG~~l~~----l~~~-~~~~~~l~~~-----~VfAR~sP~--qK~~iV~~Lq~-~g---~ 803 (1191)
+. .+...++........ +..- ..+.+..... .-+-.+.|. +|...|+.+.+ .| .
T Consensus 112 ~~~~~~pg~~ve~k~~~~~~h~r~~~~~~~~~~~l~~~i~~~~~~~~~~~g~~~lEi~p~g~~Kg~al~~ll~~~~~~~~ 191 (266)
T PRK10187 112 TALAQLPGAELEAKGMAFALHYRQAPQHEDALLALAQRITQIWPQLALQPGKCVVEIKPRGTNKGEAIAAFMQEAPFAGR 191 (266)
T ss_pred HHhccCCCcEEEeCCcEEEEECCCCCccHHHHHHHHHHHHhhCCceEEeCCCEEEEeeCCCCCHHHHHHHHHHhcCCCCC
Confidence 10 011223332211110 0000 1111111111 123344453 89998887665 33 5
Q ss_pred EEEEEcCCccCHHHHhhC----CceEEeccCCC
Q 001010 804 MTLMCGDGTNDVGALKQA----HVGVALLNAVP 832 (1191)
Q Consensus 804 ~V~m~GDG~ND~~ALk~A----dVGIAl~~~~~ 832 (1191)
.|+++||+.||.+|++.+ +.||+|+++.+
T Consensus 192 ~v~~~GD~~nD~~mf~~~~~~~g~~vavg~a~~ 224 (266)
T PRK10187 192 TPVFVGDDLTDEAGFAVVNRLGGISVKVGTGAT 224 (266)
T ss_pred eEEEEcCCccHHHHHHHHHhcCCeEEEECCCCC
Confidence 799999999999999999 99999998654
|
|
| >PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=96.81 E-value=0.014 Score=65.74 Aligned_cols=42 Identities=12% Similarity=0.063 Sum_probs=38.4
Q ss_pred CcCCchhHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCC
Q 001010 673 CPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIV 714 (1191)
Q Consensus 673 d~lK~da~~~I~~L~~agi~vvMiTGDn~~TA~~VA~~~gI~ 714 (1191)
+..-+.++++|++|++.||.+++.||........+.+++|+.
T Consensus 17 ~~~~~~a~~aL~~Lk~~GI~vVlaTGRt~~ev~~l~~~Lgl~ 58 (302)
T PRK12702 17 FNSYGAARQALAALERRSIPLVLYSLRTRAQLEHLCRQLRLE 58 (302)
T ss_pred CcCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHhCCC
Confidence 345677999999999999999999999999999999999984
|
|
| >PRK08238 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=96.62 E-value=0.0091 Score=72.71 Aligned_cols=96 Identities=16% Similarity=0.163 Sum_probs=72.3
Q ss_pred cCCchhHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCcEEEeecCCCceeeecCCCccccccCChHHHhcccc
Q 001010 674 PIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLTD 753 (1191)
Q Consensus 674 ~lK~da~~~I~~L~~agi~vvMiTGDn~~TA~~VA~~~gI~~~~~~il~~~~~~~~~~w~~~d~~~~~~~~~~~~~~~~~ 753 (1191)
|++|++.+.++++++.|++++++|+=+...+..+++.+|+.+ .++.
T Consensus 72 p~~pga~e~L~~lk~~G~~v~LaTas~~~~a~~i~~~lGlFd---~Vig------------------------------- 117 (479)
T PRK08238 72 PYNEEVLDYLRAERAAGRKLVLATASDERLAQAVAAHLGLFD---GVFA------------------------------- 117 (479)
T ss_pred CCChhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCC---EEEe-------------------------------
Confidence 678999999999999999999999999999999999999842 1211
Q ss_pred cceEEEechhhhhhcchHHHHhhcCcceEEeecChhhHHHHHHHHhHcCCEEEEEcCCccCHHHHhhCCceEEeccC
Q 001010 754 AHDLCIGGDCFEMLQQTSAVLRVIPYVKVFARVAPEQKELILTTFKAVGRMTLMCGDGTNDVGALKQAHVGVALLNA 830 (1191)
Q Consensus 754 ~~~l~itG~~l~~l~~~~~~~~~l~~~~VfAR~sP~qK~~iV~~Lq~~g~~V~m~GDG~ND~~ALk~AdVGIAl~~~ 830 (1191)
++. ..+..|+.|...+...... ..+.|+||..||.++++.|+-.++++.+
T Consensus 118 -------sd~-------------------~~~~kg~~K~~~l~~~l~~-~~~~yvGDS~~Dlp~~~~A~~av~Vn~~ 167 (479)
T PRK08238 118 -------SDG-------------------TTNLKGAAKAAALVEAFGE-RGFDYAGNSAADLPVWAAARRAIVVGAS 167 (479)
T ss_pred -------CCC-------------------ccccCCchHHHHHHHHhCc-cCeeEecCCHHHHHHHHhCCCeEEECCC
Confidence 000 0134566676555432222 2257899999999999999999998854
|
|
| >TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB | Back alignment and domain information |
|---|
Probab=96.52 E-value=0.0073 Score=65.12 Aligned_cols=39 Identities=13% Similarity=0.260 Sum_probs=35.8
Q ss_pred cCCchhHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcC
Q 001010 674 PIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVH 712 (1191)
Q Consensus 674 ~lK~da~~~I~~L~~agi~vvMiTGDn~~TA~~VA~~~g 712 (1191)
++-+++.++|++|++.|++++++||.....+..+.++++
T Consensus 17 ~~~~~~~~~l~~l~~~g~~~~i~TGR~~~~~~~~~~~~~ 55 (204)
T TIGR01484 17 ELSPETIEALERLREAGVKVVLVTGRSLAEIKELLKQLP 55 (204)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHhCC
Confidence 577999999999999999999999999999999998854
|
The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear. |
| >PTZ00174 phosphomannomutase; Provisional | Back alignment and domain information |
|---|
Probab=96.30 E-value=0.021 Score=63.71 Aligned_cols=45 Identities=20% Similarity=0.226 Sum_probs=38.6
Q ss_pred hhHHHHHHHHhHcCCEEEEEcC----CccCHHHHhhC-CceEEeccCCCc
Q 001010 789 EQKELILTTFKAVGRMTLMCGD----GTNDVGALKQA-HVGVALLNAVPP 833 (1191)
Q Consensus 789 ~qK~~iV~~Lq~~g~~V~m~GD----G~ND~~ALk~A-dVGIAl~~~~~e 833 (1191)
-+|..-|+.|.+.-..|+.+|| |-||.+||+.| -.|+++.|+.+.
T Consensus 187 vsKg~al~~L~~~~~eviafGD~~~~~~NDieMl~~~~~~g~~v~n~~~~ 236 (247)
T PTZ00174 187 WDKTYCLRHLENDFKEIHFFGDKTFEGGNDYEIYNDPRTIGHSVKNPEDT 236 (247)
T ss_pred CcHHHHHHHHHhhhhhEEEEcccCCCCCCcHhhhhcCCCceEEeCCHHHH
Confidence 4799999999888789999999 99999999987 688888865543
|
|
| >TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein | Back alignment and domain information |
|---|
Probab=96.29 E-value=0.015 Score=62.89 Aligned_cols=42 Identities=17% Similarity=0.251 Sum_probs=38.5
Q ss_pred CcCCchhHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCC
Q 001010 673 CPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIV 714 (1191)
Q Consensus 673 d~lK~da~~~I~~L~~agi~vvMiTGDn~~TA~~VA~~~gI~ 714 (1191)
.++.|++.++++.|++.|+++.++||.+...+..+-+..|+.
T Consensus 74 ~~~~~g~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~~l~ 115 (205)
T TIGR01454 74 VEVFPGVPELLAELRADGVGTAIATGKSGPRARSLLEALGLL 115 (205)
T ss_pred cccCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHcCCh
Confidence 478899999999999999999999999988888888888884
|
The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity. |
| >PRK10826 2-deoxyglucose-6-phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=96.19 E-value=0.016 Score=63.40 Aligned_cols=99 Identities=13% Similarity=0.091 Sum_probs=70.1
Q ss_pred CcCCchhHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCcEEEeecCCCceeeecCCCccccccCChHHHhccc
Q 001010 673 CPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLT 752 (1191)
Q Consensus 673 d~lK~da~~~I~~L~~agi~vvMiTGDn~~TA~~VA~~~gI~~~~~~il~~~~~~~~~~w~~~d~~~~~~~~~~~~~~~~ 752 (1191)
.++.|++.++|+.|++.|+++.++||........+.++.||..--..
T Consensus 91 ~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~--------------------------------- 137 (222)
T PRK10826 91 RPLLPGVREALALCKAQGLKIGLASASPLHMLEAVLTMFDLRDYFDA--------------------------------- 137 (222)
T ss_pred CCCCCCHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHhCcchhcccE---------------------------------
Confidence 57889999999999999999999999999999999999998521111
Q ss_pred ccceEEEechhhhhhcchHHHHhhcCcceEEeecChhhHHHHHHHHhHcC---CEEEEEcCCccCHHHHhhCCceEEecc
Q 001010 753 DAHDLCIGGDCFEMLQQTSAVLRVIPYVKVFARVAPEQKELILTTFKAVG---RMTLMCGDGTNDVGALKQAHVGVALLN 829 (1191)
Q Consensus 753 ~~~~l~itG~~l~~l~~~~~~~~~l~~~~VfAR~sP~qK~~iV~~Lq~~g---~~V~m~GDG~ND~~ALk~AdVGIAl~~ 829 (1191)
.++++. + ....|+- .-+.+.+++.| ..++|+||..||+.|-+.|++......
T Consensus 138 -----~~~~~~------------------~-~~~Kp~~-~~~~~~~~~~~~~~~~~~~igDs~~Di~aA~~aG~~~i~v~ 192 (222)
T PRK10826 138 -----LASAEK------------------L-PYSKPHP-EVYLNCAAKLGVDPLTCVALEDSFNGMIAAKAARMRSIVVP 192 (222)
T ss_pred -----EEEccc------------------C-CCCCCCH-HHHHHHHHHcCCCHHHeEEEcCChhhHHHHHHcCCEEEEec
Confidence 111111 0 0112222 13344445444 458999999999999999998765553
|
|
| >PRK13223 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=96.13 E-value=0.025 Score=64.19 Aligned_cols=42 Identities=19% Similarity=0.173 Sum_probs=38.4
Q ss_pred CcCCchhHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCC
Q 001010 673 CPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIV 714 (1191)
Q Consensus 673 d~lK~da~~~I~~L~~agi~vvMiTGDn~~TA~~VA~~~gI~ 714 (1191)
.++.|++.++++.|++.|+++.++||-+...+..+.++.|+.
T Consensus 100 ~~~~~g~~e~L~~Lk~~g~~l~ivTn~~~~~~~~~l~~~~i~ 141 (272)
T PRK13223 100 TVVYPGVRDTLKWLKKQGVEMALITNKPERFVAPLLDQMKIG 141 (272)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEECCcHHHHHHHHHHcCcH
Confidence 478899999999999999999999999998888888888874
|
|
| >TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic | Back alignment and domain information |
|---|
Probab=96.10 E-value=0.025 Score=61.26 Aligned_cols=42 Identities=12% Similarity=0.137 Sum_probs=39.0
Q ss_pred CcCCchhHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCC
Q 001010 673 CPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIV 714 (1191)
Q Consensus 673 d~lK~da~~~I~~L~~agi~vvMiTGDn~~TA~~VA~~~gI~ 714 (1191)
-++.|++.++++.|++.|+++.++|+-+...+..+.+..|+.
T Consensus 84 ~~~~~g~~~~L~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~ 125 (213)
T TIGR01449 84 TSVFPGVEATLGALRAKGLRLGLVTNKPTPLARPLLELLGLA 125 (213)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCcH
Confidence 368999999999999999999999999999999999999985
|
This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702). |
| >TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548 | Back alignment and domain information |
|---|
Probab=96.05 E-value=0.025 Score=60.70 Aligned_cols=43 Identities=16% Similarity=0.182 Sum_probs=38.4
Q ss_pred cCcCCchhHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCC
Q 001010 672 NCPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIV 714 (1191)
Q Consensus 672 ~d~lK~da~~~I~~L~~agi~vvMiTGDn~~TA~~VA~~~gI~ 714 (1191)
.+++.+++.++++.|++.|+++.++||-....+..+-+..|+.
T Consensus 104 ~~~~~~~~~~~L~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~ 146 (197)
T TIGR01548 104 EDETLLTPKGLLRELHRAPKGMAVVTGRPRKDAAKFLTTHGLE 146 (197)
T ss_pred ccccccCHHHHHHHHHHcCCcEEEECCCCHHHHHHHHHHcCch
Confidence 3456777899999999999999999999999999999999984
|
All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's. |
| >TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB | Back alignment and domain information |
|---|
Probab=95.88 E-value=0.048 Score=59.37 Aligned_cols=106 Identities=19% Similarity=0.060 Sum_probs=73.9
Q ss_pred cCCchhHHHHH-HHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCcEEEeecCCCceeeecCCCccccccCChHHHhccc
Q 001010 674 PIREDSAKILS-ELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLT 752 (1191)
Q Consensus 674 ~lK~da~~~I~-~L~~agi~vvMiTGDn~~TA~~VA~~~gI~~~~~~il~~~~~~~~~~w~~~d~~~~~~~~~~~~~~~~ 752 (1191)
.++|++.++|+ .+++.|++++++|+=....+..+|+..++.....+|-+. ++-
T Consensus 94 ~l~pga~e~L~~~l~~~G~~v~IvSas~~~~~~~ia~~~~~~~~~~~i~t~------le~-------------------- 147 (210)
T TIGR01545 94 TAFPLVAERLRQYLESSDADIWLITGSPQPLVEAVYFDSNFIHRLNLIASQ------IER-------------------- 147 (210)
T ss_pred CCCccHHHHHHHHHHhCCCEEEEEcCCcHHHHHHHHHhccccccCcEEEEE------eEE--------------------
Confidence 56899999996 789999999999999999999999997765322222110 000
Q ss_pred ccceEEEechhhhhhcchHHHHhhcCcceEE-eecChhhHHHHHHHH-hHcCCEEEEEcCCccCHHHHhhCCceEEecc
Q 001010 753 DAHDLCIGGDCFEMLQQTSAVLRVIPYVKVF-ARVAPEQKELILTTF-KAVGRMTLMCGDGTNDVGALKQAHVGVALLN 829 (1191)
Q Consensus 753 ~~~~l~itG~~l~~l~~~~~~~~~l~~~~Vf-AR~sP~qK~~iV~~L-q~~g~~V~m~GDG~ND~~ALk~AdVGIAl~~ 829 (1191)
-.| .++- ..+.-++|..-++.. .......-+=||..||.|+|+.||-.+++..
T Consensus 148 ------~~g------------------g~~~g~~c~g~~Kv~rl~~~~~~~~~~~~aYsDS~~D~pmL~~a~~~~~Vnp 202 (210)
T TIGR01545 148 ------GNG------------------GWVLPLRCLGHEKVAQLEQKIGSPLKLYSGYSDSKQDNPLLAFCEHRWRVSK 202 (210)
T ss_pred ------eCC------------------ceEcCccCCChHHHHHHHHHhCCChhheEEecCCcccHHHHHhCCCcEEECc
Confidence 000 0010 125567888777644 2222345688999999999999999999873
|
The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene. |
| >TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672 | Back alignment and domain information |
|---|
Probab=95.83 E-value=0.023 Score=62.90 Aligned_cols=41 Identities=15% Similarity=0.222 Sum_probs=36.1
Q ss_pred cCCchhHHHHHHHHhcCCcEEEEcCC----CHHHHHHHHHHcCCC
Q 001010 674 PIREDSAKILSELKNSSQDLAMITGD----QALTACYVASQVHIV 714 (1191)
Q Consensus 674 ~lK~da~~~I~~L~~agi~vvMiTGD----n~~TA~~VA~~~gI~ 714 (1191)
.+++.+++.+++|++.|+++.++|+- ...++..+.+.+|+.
T Consensus 114 ~p~~~a~elL~~l~~~G~~i~iVTnr~~~k~~~~a~~ll~~lGi~ 158 (237)
T TIGR01672 114 IPKEVARQLIDMHQRRGDAIFFVTGRTPGKTDTVSKTLAKNFHIP 158 (237)
T ss_pred cchhHHHHHHHHHHHCCCEEEEEeCCCCCcCHHHHHHHHHHhCCc
Confidence 34555999999999999999999997 667999999999995
|
Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion. |
| >PRK11590 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=95.77 E-value=0.08 Score=57.64 Aligned_cols=107 Identities=18% Similarity=0.033 Sum_probs=74.8
Q ss_pred cCCchhHHHH-HHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCcEEEeecCCCceeeecCCCccccccCChHHHhccc
Q 001010 674 PIREDSAKIL-SELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLT 752 (1191)
Q Consensus 674 ~lK~da~~~I-~~L~~agi~vvMiTGDn~~TA~~VA~~~gI~~~~~~il~~~~~~~~~~w~~~d~~~~~~~~~~~~~~~~ 752 (1191)
.+.|++.+.| +.|++.|++++++|+-....+..+++.+|+.....++-+.
T Consensus 95 ~~~pga~e~L~~~l~~~G~~l~IvSas~~~~~~~il~~l~~~~~~~~i~t~----------------------------- 145 (211)
T PRK11590 95 TAFPVVQERLTTYLLSSDADVWLITGSPQPLVEQVYFDTPWLPRVNLIASQ----------------------------- 145 (211)
T ss_pred cCCccHHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHccccccCceEEEE-----------------------------
Confidence 5589999999 5788999999999999999999999999963211121110
Q ss_pred ccceEEEechhhhhhcchHHHHhhcCcceEEeecChhhHHHHHHHH-hHcCCEEEEEcCCccCHHHHhhCCceEEecc
Q 001010 753 DAHDLCIGGDCFEMLQQTSAVLRVIPYVKVFARVAPEQKELILTTF-KAVGRMTLMCGDGTNDVGALKQAHVGVALLN 829 (1191)
Q Consensus 753 ~~~~l~itG~~l~~l~~~~~~~~~l~~~~VfAR~sP~qK~~iV~~L-q~~g~~V~m~GDG~ND~~ALk~AdVGIAl~~ 829 (1191)
.....||... =..+.-++|..-++.. .......-+=||..||.|+|+.|+-++++..
T Consensus 146 --l~~~~tg~~~------------------g~~c~g~~K~~~l~~~~~~~~~~~~aY~Ds~~D~pmL~~a~~~~~vnp 203 (211)
T PRK11590 146 --MQRRYGGWVL------------------TLRCLGHEKVAQLERKIGTPLRLYSGYSDSKQDNPLLYFCQHRWRVTP 203 (211)
T ss_pred --EEEEEccEEC------------------CccCCChHHHHHHHHHhCCCcceEEEecCCcccHHHHHhCCCCEEECc
Confidence 0112222210 0125567888877654 3233345678999999999999999999873
|
|
| >TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544 | Back alignment and domain information |
|---|
Probab=95.72 E-value=0.048 Score=61.38 Aligned_cols=48 Identities=10% Similarity=0.119 Sum_probs=42.5
Q ss_pred CcCCchhHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCcEE
Q 001010 673 CPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLI 720 (1191)
Q Consensus 673 d~lK~da~~~I~~L~~agi~vvMiTGDn~~TA~~VA~~~gI~~~~~~i 720 (1191)
-+++|++.+.++.|++.|+++.++||-....+..+.++.|+...+..+
T Consensus 120 l~l~pG~~efl~~L~~~GIpv~IvS~G~~~~Ie~vL~~lgl~~~~~~I 167 (277)
T TIGR01544 120 VMLKDGYENFFDKLQQHSIPVFIFSAGIGNVLEEVLRQAGVYHPNVKV 167 (277)
T ss_pred CccCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHHcCCCCcCceE
Confidence 578999999999999999999999999999999999999986444333
|
This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB. |
| >PRK13288 pyrophosphatase PpaX; Provisional | Back alignment and domain information |
|---|
Probab=95.71 E-value=0.033 Score=60.51 Aligned_cols=41 Identities=17% Similarity=0.054 Sum_probs=38.2
Q ss_pred cCCchhHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCC
Q 001010 674 PIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIV 714 (1191)
Q Consensus 674 ~lK~da~~~I~~L~~agi~vvMiTGDn~~TA~~VA~~~gI~ 714 (1191)
++.|++.++++.|++.|+++.++||.....+..+-+..|+.
T Consensus 82 ~~~~g~~~~l~~L~~~g~~~~i~S~~~~~~~~~~l~~~gl~ 122 (214)
T PRK13288 82 TEYETVYETLKTLKKQGYKLGIVTTKMRDTVEMGLKLTGLD 122 (214)
T ss_pred ccCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCh
Confidence 47899999999999999999999999999999999999985
|
|
| >PRK11009 aphA acid phosphatase/phosphotransferase; Provisional | Back alignment and domain information |
|---|
Probab=95.61 E-value=0.036 Score=61.28 Aligned_cols=42 Identities=17% Similarity=0.218 Sum_probs=37.1
Q ss_pred CcCCchhHHHHHHHHhcCCcEEEEcCC----CHHHHHHHHHHcCCC
Q 001010 673 CPIREDSAKILSELKNSSQDLAMITGD----QALTACYVASQVHIV 714 (1191)
Q Consensus 673 d~lK~da~~~I~~L~~agi~vvMiTGD----n~~TA~~VA~~~gI~ 714 (1191)
..+.+++++.+++|++.|+++.+|||. ...|+..+.+..||.
T Consensus 113 a~p~~Ga~elL~~L~~~G~~I~iVTnR~~~k~~~t~~~Llk~~gip 158 (237)
T PRK11009 113 SIPKEVARQLIDMHVKRGDSIYFITGRTATKTETVSKTLADDFHIP 158 (237)
T ss_pred CcchHHHHHHHHHHHHCCCeEEEEeCCCCcccHHHHHHHHHHcCCC
Confidence 457889999999999999999999995 466999999999983
|
|
| >PRK13226 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=95.60 E-value=0.05 Score=59.97 Aligned_cols=42 Identities=12% Similarity=0.130 Sum_probs=37.4
Q ss_pred CcCCchhHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCC
Q 001010 673 CPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIV 714 (1191)
Q Consensus 673 d~lK~da~~~I~~L~~agi~vvMiTGDn~~TA~~VA~~~gI~ 714 (1191)
-++.|++.++++.|++.|+++.++|+.+...+..+-+..|+.
T Consensus 94 ~~~~pg~~~~L~~L~~~g~~l~i~Tn~~~~~~~~~l~~~~l~ 135 (229)
T PRK13226 94 SQLFDGVEGMLQRLECAGCVWGIVTNKPEYLARLILPQLGWE 135 (229)
T ss_pred CeeCCCHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCch
Confidence 367899999999999999999999999988888777888874
|
|
| >PRK13225 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=95.27 E-value=0.063 Score=60.91 Aligned_cols=41 Identities=12% Similarity=0.166 Sum_probs=38.5
Q ss_pred cCCchhHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCC
Q 001010 674 PIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIV 714 (1191)
Q Consensus 674 ~lK~da~~~I~~L~~agi~vvMiTGDn~~TA~~VA~~~gI~ 714 (1191)
++-|++.++++.|++.|+++.++|+.+...+..+-+..|+.
T Consensus 142 ~l~pg~~e~L~~L~~~gi~laIvSn~~~~~~~~~L~~~gl~ 182 (273)
T PRK13225 142 QLFPGVADLLAQLRSRSLCLGILSSNSRQNIEAFLQRQGLR 182 (273)
T ss_pred CcCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCh
Confidence 67899999999999999999999999999999999999984
|
|
| >TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II | Back alignment and domain information |
|---|
Probab=95.22 E-value=0.084 Score=56.58 Aligned_cols=41 Identities=17% Similarity=0.186 Sum_probs=37.4
Q ss_pred cCCchhHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCC
Q 001010 674 PIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIV 714 (1191)
Q Consensus 674 ~lK~da~~~I~~L~~agi~vvMiTGDn~~TA~~VA~~~gI~ 714 (1191)
++.|++.++++.|++.|+++.++|+-+...+..+.+.+|+.
T Consensus 92 ~~~~~~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~gl~ 132 (198)
T TIGR01428 92 PPHPDVPAGLRALKERGYRLAILSNGSPAMLKSLVKHAGLD 132 (198)
T ss_pred CCCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHCCCh
Confidence 67899999999999999999999998888888888889974
|
Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related. |
| >PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional | Back alignment and domain information |
|---|
Probab=95.20 E-value=0.17 Score=65.40 Aligned_cols=183 Identities=17% Similarity=0.201 Sum_probs=98.1
Q ss_pred HHHHHHHHHHHhcCeeeeEEEEeCCCCChhhhhhccccccccCeEEeeeec--ccCcCCchhHHHHHHHHh-cCCcEEEE
Q 001010 620 SYIETYKKYTHQGSRVLALAFKSLPDMTVSDARSLHRDEVENGLTFAGFAV--FNCPIREDSAKILSELKN-SSQDLAMI 696 (1191)
Q Consensus 620 ~~~~~~~~~a~~G~RVLalA~k~l~~~~~~~~~~~~r~~~E~dL~flG~l~--~~d~lK~da~~~I~~L~~-agi~vvMi 696 (1191)
+.+...+.|.+.-.|.+++-| |.|++.... -...+-+++.++|++|.+ .|+.|+++
T Consensus 479 ~~~~~~~~y~~~~~rLi~~D~---------------------DGTL~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~iv 537 (726)
T PRK14501 479 AAEEIIARYRAASRRLLLLDY---------------------DGTLVPFAPDPELAVPDKELRDLLRRLAADPNTDVAII 537 (726)
T ss_pred CHHHHHHHHHhccceEEEEec---------------------CccccCCCCCcccCCCCHHHHHHHHHHHcCCCCeEEEE
Confidence 345566677666678777765 444443211 112456899999999999 69999999
Q ss_pred cCCCHHHHHHHHHHcCCC---CCCcEEEeecCCCceeeecCCCccccccCChHHHh----cc----------cccceEEE
Q 001010 697 TGDQALTACYVASQVHIV---TKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVE----GL----------TDAHDLCI 759 (1191)
Q Consensus 697 TGDn~~TA~~VA~~~gI~---~~~~~il~~~~~~~~~~w~~~d~~~~~~~~~~~~~----~~----------~~~~~l~i 759 (1191)
||.............++. .++..+.. .+. .|....... ... .+.+. .. .+...+..
T Consensus 538 SGR~~~~l~~~~~~~~l~liaenG~~i~~---~~~--~w~~~~~~~-~~w-~~~v~~il~~~~~~~~gs~ie~k~~~l~~ 610 (726)
T PRK14501 538 SGRDRDTLERWFGDLPIHLVAEHGAWSRA---PGG--EWQLLEPVA-TEW-KDAVRPILEEFVDRTPGSFIEEKEASLAW 610 (726)
T ss_pred eCCCHHHHHHHhCCCCeEEEEeCCEEEeC---CCC--ceEECCCcc-hhH-HHHHHHHHHHHHhcCCCcEEEEcceEEEE
Confidence 999999888776655531 11111111 011 232211000 000 01111 00 00111221
Q ss_pred ec----hhhhhhcch---HHHHhhcC--cceEE-----eecCh--hhHHHHHHHHhHc--CCEEEEEcCCccCHHHHhhC
Q 001010 760 GG----DCFEMLQQT---SAVLRVIP--YVKVF-----ARVAP--EQKELILTTFKAV--GRMTLMCGDGTNDVGALKQA 821 (1191)
Q Consensus 760 tG----~~l~~l~~~---~~~~~~l~--~~~Vf-----AR~sP--~qK~~iV~~Lq~~--g~~V~m~GDG~ND~~ALk~A 821 (1191)
.= ..+...... ..+...+. ...+. -.+.| -+|...++.+.+. ...|+++||+.||.+|++.+
T Consensus 611 ~~r~~d~~~~~~~a~~l~~~l~~~~~~~~~~v~~g~~~veV~p~~vnKG~al~~ll~~~~~d~vl~~GD~~nDe~Mf~~~ 690 (726)
T PRK14501 611 HYRNADPELGEARANELILALSSLLSNAPLEVLRGNKVVEVRPAGVNKGRAVRRLLEAGPYDFVLAIGDDTTDEDMFRAL 690 (726)
T ss_pred EccCCCHHHHHHHHHHHHHHHHHHhcCCCeEEEECCeEEEEEECCCCHHHHHHHHHhcCCCCEEEEECCCCChHHHHHhc
Confidence 10 111111000 11222221 11111 13334 4799999998873 24899999999999999996
Q ss_pred ---CceEEeccC
Q 001010 822 ---HVGVALLNA 830 (1191)
Q Consensus 822 ---dVGIAl~~~ 830 (1191)
..||+++++
T Consensus 691 ~~~~~~v~vG~~ 702 (726)
T PRK14501 691 PETAITVKVGPG 702 (726)
T ss_pred ccCceEEEECCC
Confidence 588888864
|
|
| >COG4359 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=95.13 E-value=0.061 Score=55.60 Aligned_cols=38 Identities=21% Similarity=0.389 Sum_probs=34.6
Q ss_pred hhHHHHHHHHhHcCCEEEEEcCCccCHHHHhhCCceEE
Q 001010 789 EQKELILTTFKAVGRMTLMCGDGTNDVGALKQAHVGVA 826 (1191)
Q Consensus 789 ~qK~~iV~~Lq~~g~~V~m~GDG~ND~~ALk~AdVGIA 826 (1191)
.+|...|+.|++....+.|||||+.|..|-|.+|+=.|
T Consensus 146 ~dK~~vI~~l~e~~e~~fy~GDsvsDlsaaklsDllFA 183 (220)
T COG4359 146 HDKSSVIHELSEPNESIFYCGDSVSDLSAAKLSDLLFA 183 (220)
T ss_pred CCcchhHHHhhcCCceEEEecCCcccccHhhhhhhHhh
Confidence 46889999999999999999999999999999888766
|
|
| >PRK11587 putative phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=95.10 E-value=0.12 Score=56.34 Aligned_cols=40 Identities=13% Similarity=0.112 Sum_probs=33.4
Q ss_pred cCCchhHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCC
Q 001010 674 PIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHI 713 (1191)
Q Consensus 674 ~lK~da~~~I~~L~~agi~vvMiTGDn~~TA~~VA~~~gI 713 (1191)
++.|++.++++.|++.|+++.++|+.+...+...-+..|+
T Consensus 83 ~~~pg~~e~L~~L~~~g~~~~ivTn~~~~~~~~~l~~~~l 122 (218)
T PRK11587 83 TALPGAIALLNHLNKLGIPWAIVTSGSVPVASARHKAAGL 122 (218)
T ss_pred eeCcCHHHHHHHHHHcCCcEEEEcCCCchHHHHHHHhcCC
Confidence 6789999999999999999999999877666555555665
|
|
| >PHA02530 pseT polynucleotide kinase; Provisional | Back alignment and domain information |
|---|
Probab=95.03 E-value=0.092 Score=60.29 Aligned_cols=109 Identities=11% Similarity=-0.052 Sum_probs=74.3
Q ss_pred cccCcCCchhHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCC-CCcEEEeecCCCceeeecCCCccccccCChHHH
Q 001010 670 VFNCPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVT-KPVLILCPVKNGKVYEWVSPDETEKIQYSEKEV 748 (1191)
Q Consensus 670 ~~~d~lK~da~~~I~~L~~agi~vvMiTGDn~~TA~~VA~~~gI~~-~~~~il~~~~~~~~~~w~~~d~~~~~~~~~~~~ 748 (1191)
...+++.+++.++|+.|++.|++++++||....++..+.+.+|+.. .-..+.
T Consensus 183 ~~~~~~~~~~~~~l~~l~~~g~~i~i~T~r~~~~~~~~l~~l~~~~~~f~~i~--------------------------- 235 (300)
T PHA02530 183 VKEDKPNPMVVELVKMYKAAGYEIIVVSGRDGVCEEDTVEWLRQTDIWFDDLI--------------------------- 235 (300)
T ss_pred cccCCCChhHHHHHHHHHhCCCEEEEEeCCChhhHHHHHHHHHHcCCchhhhh---------------------------
Confidence 3578899999999999999999999999999999999999998842 000000
Q ss_pred hcccccceEEEechhhhhhcchHHHHhhcCcceEEeecChhhHHHHHHHHhH-cCCEEEEEcCCccCHHHHhhCCceEE
Q 001010 749 EGLTDAHDLCIGGDCFEMLQQTSAVLRVIPYVKVFARVAPEQKELILTTFKA-VGRMTLMCGDGTNDVGALKQAHVGVA 826 (1191)
Q Consensus 749 ~~~~~~~~l~itG~~l~~l~~~~~~~~~l~~~~VfAR~sP~qK~~iV~~Lq~-~g~~V~m~GDG~ND~~ALk~AdVGIA 826 (1191)
..+.... .+... ---+-.|+=+...++.+-. .-..++|+||..||+.|-+.|++-.-
T Consensus 236 -----------~~~~~~~---------~~~~~-~~~kp~p~~~~~~l~~~~~~~~~~~~~vgD~~~d~~~a~~~Gi~~i 293 (300)
T PHA02530 236 -----------GRPPDMH---------FQREQ-GDKRPDDVVKEEIFWEKIAPKYDVLLAVDDRDQVVDMWRRIGLECW 293 (300)
T ss_pred -----------CCcchhh---------hcccC-CCCCCcHHHHHHHHHHHhccCceEEEEEcCcHHHHHHHHHhCCeEE
Confidence 0000000 00000 0013346667777766533 23679999999999999999998643
|
|
| >TIGR03351 PhnX-like phosphonatase-like hydrolase | Back alignment and domain information |
|---|
Probab=94.94 E-value=0.11 Score=56.63 Aligned_cols=42 Identities=17% Similarity=0.100 Sum_probs=39.1
Q ss_pred CcCCchhHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCC
Q 001010 673 CPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIV 714 (1191)
Q Consensus 673 d~lK~da~~~I~~L~~agi~vvMiTGDn~~TA~~VA~~~gI~ 714 (1191)
.++.||+.+.++.|++.|+++.++||-....+..+.+..|+.
T Consensus 86 ~~l~~G~~~~L~~L~~~g~~~~ivT~~~~~~~~~~l~~~~l~ 127 (220)
T TIGR03351 86 PVALPGAEEAFRSLRSSGIKVALTTGFDRDTAERLLEKLGWT 127 (220)
T ss_pred CccCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHhhhh
Confidence 478999999999999999999999999999999999999874
|
This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the |
| >PLN02770 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=94.89 E-value=0.083 Score=59.03 Aligned_cols=41 Identities=12% Similarity=0.014 Sum_probs=38.3
Q ss_pred cCCchhHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCC
Q 001010 674 PIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIV 714 (1191)
Q Consensus 674 ~lK~da~~~I~~L~~agi~vvMiTGDn~~TA~~VA~~~gI~ 714 (1191)
++.|++.++++.|++.|+++.++|+-+...+..+-+..|+.
T Consensus 108 ~l~pgv~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~ 148 (248)
T PLN02770 108 KPLNGLYKLKKWIEDRGLKRAAVTNAPRENAELMISLLGLS 148 (248)
T ss_pred CcCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCCh
Confidence 57899999999999999999999999999999999999985
|
|
| >TIGR01990 bPGM beta-phosphoglucomutase | Back alignment and domain information |
|---|
Probab=94.63 E-value=0.068 Score=56.39 Aligned_cols=40 Identities=15% Similarity=0.300 Sum_probs=31.8
Q ss_pred CcCCchhHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCC
Q 001010 673 CPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIV 714 (1191)
Q Consensus 673 d~lK~da~~~I~~L~~agi~vvMiTGDn~~TA~~VA~~~gI~ 714 (1191)
.++.|++.++|+.|+++|+++.++|+... +..+.+..|+.
T Consensus 86 ~~~~pg~~~~L~~L~~~g~~~~i~s~~~~--~~~~l~~~~l~ 125 (185)
T TIGR01990 86 ADVLPGIKNLLDDLKKNNIKIALASASKN--APTVLEKLGLI 125 (185)
T ss_pred cccCccHHHHHHHHHHCCCeEEEEeCCcc--HHHHHHhcCcH
Confidence 36789999999999999999999997432 34566777763
|
The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state. |
| >PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria [] | Back alignment and domain information |
|---|
Probab=94.61 E-value=0.084 Score=58.98 Aligned_cols=143 Identities=19% Similarity=0.261 Sum_probs=74.7
Q ss_pred HHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCcEEEeecCCCceeeecC---CCc----cccccCChHHHhcc-------
Q 001010 686 LKNSSQDLAMITGDQALTACYVASQVHIVTKPVLILCPVKNGKVYEWVS---PDE----TEKIQYSEKEVEGL------- 751 (1191)
Q Consensus 686 L~~agi~vvMiTGDn~~TA~~VA~~~gI~~~~~~il~~~~~~~~~~w~~---~d~----~~~~~~~~~~~~~~------- 751 (1191)
..+.++..+.+||.+...+..+.++.++.. +..++++.+ ..+.+-. .|+ ......+.+.+.+.
T Consensus 31 ~~~~~~~~v~~TGRs~~~~~~~~~~~~l~~-Pd~~I~svG--t~I~~~~~~~~d~~w~~~i~~~w~~~~v~~~l~~~~~l 107 (247)
T PF05116_consen 31 QARPEILFVYVTGRSLESVLRLLREYNLPQ-PDYIITSVG--TEIYYGENWQPDEEWQAHIDERWDRERVEEILAELPGL 107 (247)
T ss_dssp HHCCGEEEEEE-SS-HHHHHHHHHHCT-EE--SEEEETTT--TEEEESSTTEE-HHHHHHHHTT--HHHHHHHHHCHCCE
T ss_pred hhCCCceEEEECCCCHHHHHHHHHhCCCCC-CCEEEecCC--eEEEEcCCCcChHHHHHHHHhcCChHHHHHHHHHhhCc
Confidence 446788899999999999999999999864 344444222 2222200 000 00001111111110
Q ss_pred -------cc--cceEEEechhhhhhcchHHHHhhcC----cce-EE-----eecCh--hhHHHHHHHHhHc-C---CEEE
Q 001010 752 -------TD--AHDLCIGGDCFEMLQQTSAVLRVIP----YVK-VF-----ARVAP--EQKELILTTFKAV-G---RMTL 806 (1191)
Q Consensus 752 -------~~--~~~l~itG~~l~~l~~~~~~~~~l~----~~~-Vf-----AR~sP--~qK~~iV~~Lq~~-g---~~V~ 806 (1191)
.. +....+......... ..+.+.+. .++ ++ -.+-| ..|...|+.|++. | ..|+
T Consensus 108 ~~q~~~~q~~~k~sy~~~~~~~~~~~--~~i~~~l~~~~l~~~~i~s~~~~ldilP~~a~K~~Al~~L~~~~~~~~~~vl 185 (247)
T PF05116_consen 108 RPQPESEQRPFKISYYVDPDDSADIL--EEIRARLRQRGLRVNVIYSNGRDLDILPKGASKGAALRYLMERWGIPPEQVL 185 (247)
T ss_dssp EEGGCCCGCCTCECEEEETTSHCHHH--HHHHHHHHCCTCEEEEEECTCCEEEEEETT-SHHHHHHHHHHHHT--GGGEE
T ss_pred ccCCccccCCeeEEEEEecccchhHH--HHHHHHHHHcCCCeeEEEccceeEEEccCCCCHHHHHHHHHHHhCCCHHHEE
Confidence 01 112333332222211 12222221 222 22 22334 4799999999874 3 3578
Q ss_pred EEcCCccCHHHHhhCCceEEeccCCCc
Q 001010 807 MCGDGTNDVGALKQAHVGVALLNAVPP 833 (1191)
Q Consensus 807 m~GDG~ND~~ALk~AdVGIAl~~~~~e 833 (1191)
.|||..||.+||..++-||.++|+.++
T Consensus 186 ~aGDSgND~~mL~~~~~~vvV~Na~~e 212 (247)
T PF05116_consen 186 VAGDSGNDLEMLEGGDHGVVVGNAQPE 212 (247)
T ss_dssp EEESSGGGHHHHCCSSEEEE-TTS-HH
T ss_pred EEeCCCCcHHHHcCcCCEEEEcCCCHH
Confidence 899999999999999999999998766
|
SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B .... |
| >PLN03243 haloacid dehalogenase-like hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=94.58 E-value=0.13 Score=57.84 Aligned_cols=41 Identities=15% Similarity=0.120 Sum_probs=38.1
Q ss_pred cCCchhHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCC
Q 001010 674 PIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIV 714 (1191)
Q Consensus 674 ~lK~da~~~I~~L~~agi~vvMiTGDn~~TA~~VA~~~gI~ 714 (1191)
++.|++.++++.|++.|+++.++|+.....+..+-+.+|+.
T Consensus 109 ~l~pg~~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~ 149 (260)
T PLN03243 109 RLRPGSREFVQALKKHEIPIAVASTRPRRYLERAIEAVGME 149 (260)
T ss_pred ccCCCHHHHHHHHHHCCCEEEEEeCcCHHHHHHHHHHcCCH
Confidence 56899999999999999999999999999999998889885
|
|
| >PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 [] | Back alignment and domain information |
|---|
Probab=94.45 E-value=0.2 Score=55.24 Aligned_cols=107 Identities=20% Similarity=0.186 Sum_probs=70.6
Q ss_pred CcCCchhHHHHHHH--HhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCcEEEeecCCCceeeecCCCccccccCChHHHhc
Q 001010 673 CPIREDSAKILSEL--KNSSQDLAMITGDQALTACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEG 750 (1191)
Q Consensus 673 d~lK~da~~~I~~L--~~agi~vvMiTGDn~~TA~~VA~~~gI~~~~~~il~~~~~~~~~~w~~~d~~~~~~~~~~~~~~ 750 (1191)
=|+-|+.++.++.| ++.|+.++++|.=|..--.++=+.-|+...=..|.+... .|.
T Consensus 70 ip~~pgm~~~l~~l~~~~~~~~~~IiSDaNs~fI~~iL~~~gl~~~f~~I~TNpa-----~~~----------------- 127 (234)
T PF06888_consen 70 IPIDPGMKELLRFLAKNQRGFDLIIISDANSFFIETILEHHGLRDCFSEIFTNPA-----CFD----------------- 127 (234)
T ss_pred CCCCccHHHHHHHHHhcCCCceEEEEeCCcHhHHHHHHHhCCCccccceEEeCCc-----eec-----------------
Confidence 37889999999999 568999999999999999999998888532112222110 000
Q ss_pred ccccceEEEechhhhhhcchHHHHhhcCcceEEeecChh-hHHHHHHHHhHc----C---CEEEEEcCCccC-HHHHh
Q 001010 751 LTDAHDLCIGGDCFEMLQQTSAVLRVIPYVKVFARVAPE-QKELILTTFKAV----G---RMTLMCGDGTND-VGALK 819 (1191)
Q Consensus 751 ~~~~~~l~itG~~l~~l~~~~~~~~~l~~~~VfAR~sP~-qK~~iV~~Lq~~----g---~~V~m~GDG~ND-~~ALk 819 (1191)
++..+.+. . .+.+-+.++.|. =|..+++.+++. | ..|.++|||.|| ||+++
T Consensus 128 --~~G~l~v~-p---------------yh~h~C~~C~~NmCK~~il~~~~~~~~~~g~~~~rviYiGDG~nD~Cp~~~ 187 (234)
T PF06888_consen 128 --ADGRLRVR-P---------------YHSHGCSLCPPNMCKGKILERLLQEQAQRGVPYDRVIYIGDGRNDFCPALR 187 (234)
T ss_pred --CCceEEEe-C---------------ccCCCCCcCCCccchHHHHHHHHHHHhhcCCCcceEEEECCCCCCcCcccc
Confidence 00011111 0 011124455553 699999988875 4 689999999999 67765
|
It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity |
| >TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase | Back alignment and domain information |
|---|
Probab=94.04 E-value=0.097 Score=55.19 Aligned_cols=40 Identities=10% Similarity=0.150 Sum_probs=34.4
Q ss_pred CcCCchhHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCC
Q 001010 673 CPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIV 714 (1191)
Q Consensus 673 d~lK~da~~~I~~L~~agi~vvMiTGDn~~TA~~VA~~~gI~ 714 (1191)
.++.|++.++++.|++.|+++.++|+- ..+..+-+..|+.
T Consensus 87 ~~~~~g~~~~l~~l~~~g~~i~i~S~~--~~~~~~l~~~~l~ 126 (185)
T TIGR02009 87 AEVLPGIENFLKRLKKKGIAVGLGSSS--KNADRILAKLGLT 126 (185)
T ss_pred CCCCcCHHHHHHHHHHcCCeEEEEeCc--hhHHHHHHHcChH
Confidence 478999999999999999999999986 5567777778874
|
All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509). |
| >PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A | Back alignment and domain information |
|---|
Probab=93.92 E-value=0.13 Score=52.91 Aligned_cols=43 Identities=12% Similarity=0.103 Sum_probs=39.5
Q ss_pred cCcCCchhHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCC
Q 001010 672 NCPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIV 714 (1191)
Q Consensus 672 ~d~lK~da~~~I~~L~~agi~vvMiTGDn~~TA~~VA~~~gI~ 714 (1191)
..++.|++.+.++.|++.|++++++|+-.......+.++.|+.
T Consensus 75 ~~~~~~~~~~~L~~l~~~~~~~~i~Sn~~~~~~~~~l~~~~~~ 117 (176)
T PF13419_consen 75 KLQPYPGVRELLERLKAKGIPLVIVSNGSRERIERVLERLGLD 117 (176)
T ss_dssp GEEESTTHHHHHHHHHHTTSEEEEEESSEHHHHHHHHHHTTHG
T ss_pred ccchhhhhhhhhhhcccccceeEEeecCCcccccccccccccc
Confidence 3467899999999999999999999999999999999999985
|
... |
| >TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase | Back alignment and domain information |
|---|
Probab=93.82 E-value=0.19 Score=56.12 Aligned_cols=41 Identities=12% Similarity=0.092 Sum_probs=37.9
Q ss_pred cCCchhHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCC
Q 001010 674 PIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIV 714 (1191)
Q Consensus 674 ~lK~da~~~I~~L~~agi~vvMiTGDn~~TA~~VA~~~gI~ 714 (1191)
++.|++.++++.|++.|+++.++||.....+..+-+..|+.
T Consensus 99 ~~~pg~~e~L~~L~~~g~~l~IvT~~~~~~~~~~l~~~gl~ 139 (253)
T TIGR01422 99 SPIPGVIEVIAYLRARGIKIGSTTGYTREMMDVVAPEAALQ 139 (253)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHHHHhc
Confidence 56899999999999999999999999999999998888885
|
This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent. |
| >TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED | Back alignment and domain information |
|---|
Probab=93.81 E-value=0.23 Score=52.07 Aligned_cols=41 Identities=12% Similarity=0.176 Sum_probs=34.5
Q ss_pred CcCCchhHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCC
Q 001010 673 CPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIV 714 (1191)
Q Consensus 673 d~lK~da~~~I~~L~~agi~vvMiTGDn~~TA~~VA~~~gI~ 714 (1191)
-++.|++.++++.|++.|+++.++|+-.... ..+.+++|+.
T Consensus 84 ~~~~~g~~~~l~~l~~~g~~~~i~Tn~~~~~-~~~~~~~~l~ 124 (183)
T TIGR01509 84 LKPLPGVEPLLEALRARGKKLALLTNSPRDH-AVLVQELGLR 124 (183)
T ss_pred CccCcCHHHHHHHHHHCCCeEEEEeCCchHH-HHHHHhcCCH
Confidence 3678999999999999999999999988777 5555557774
|
HAD subfamilies caused by an overly broad single model. |
| >TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA | Back alignment and domain information |
|---|
Probab=93.74 E-value=0.21 Score=49.78 Aligned_cols=41 Identities=12% Similarity=0.193 Sum_probs=36.2
Q ss_pred CcCCchhHHHHHHHHhcCCcEEEEcCCC--------HHHHHHHHHHcCC
Q 001010 673 CPIREDSAKILSELKNSSQDLAMITGDQ--------ALTACYVASQVHI 713 (1191)
Q Consensus 673 d~lK~da~~~I~~L~~agi~vvMiTGDn--------~~TA~~VA~~~gI 713 (1191)
.++.|++.++++.|+++|+++.++|+.. ......+.+.+|+
T Consensus 24 ~~~~~~v~~~l~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~~l~~~~l 72 (132)
T TIGR01662 24 RILYPEVPDALAELKEAGYKVVIVTNQSGIGRGKFSSGRVARRLEELGV 72 (132)
T ss_pred heeCCCHHHHHHHHHHCCCEEEEEECCccccccHHHHHHHHHHHHHCCC
Confidence 4678999999999999999999999988 6677778888877
|
In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme. |
| >TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253 | Back alignment and domain information |
|---|
Probab=93.45 E-value=0.23 Score=54.10 Aligned_cols=41 Identities=17% Similarity=0.192 Sum_probs=36.9
Q ss_pred cCCchhHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCC
Q 001010 674 PIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIV 714 (1191)
Q Consensus 674 ~lK~da~~~I~~L~~agi~vvMiTGDn~~TA~~VA~~~gI~ 714 (1191)
++.|++.++++.|++.|+++.++|+=+...+....+.+|+.
T Consensus 94 ~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~~l~ 134 (221)
T TIGR02253 94 RVYPGVRDTLMELRESGYRLGIITDGLPVKQWEKLERLGVR 134 (221)
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHhCChH
Confidence 68899999999999999999999998888888888888874
|
This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). |
| >TIGR00685 T6PP trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=93.43 E-value=0.52 Score=52.55 Aligned_cols=45 Identities=18% Similarity=0.120 Sum_probs=34.9
Q ss_pred eecChhhHHHHHHHHhHc----CCEEEEEcCCccCHHHHhhC--------CceEEec
Q 001010 784 ARVAPEQKELILTTFKAV----GRMTLMCGDGTNDVGALKQA--------HVGVALL 828 (1191)
Q Consensus 784 AR~sP~qK~~iV~~Lq~~----g~~V~m~GDG~ND~~ALk~A--------dVGIAl~ 828 (1191)
.+-.+.+|...++.+.+. ...++|+||+.||..|++.+ ..||+++
T Consensus 161 ~~p~~~~Kg~a~~~~~~~~~~~~~~~i~iGD~~~D~~~~~~~~~~~~~~g~~~v~v~ 217 (244)
T TIGR00685 161 LKPRFVNKGEIVKRLLWHQPGSGISPVYLGDDITDEDAFRVVNNQWGNYGFYPVPIG 217 (244)
T ss_pred EeeCCCCHHHHHHHHHHhcccCCCceEEEcCCCcHHHHHHHHhcccCCCCeEEEEEe
Confidence 334456898888876653 34799999999999999999 4777775
|
At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes. |
| >PLN02575 haloacid dehalogenase-like hydrolase | Back alignment and domain information |
|---|
Probab=93.34 E-value=0.38 Score=56.79 Aligned_cols=42 Identities=17% Similarity=0.176 Sum_probs=38.8
Q ss_pred CcCCchhHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCC
Q 001010 673 CPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIV 714 (1191)
Q Consensus 673 d~lK~da~~~I~~L~~agi~vvMiTGDn~~TA~~VA~~~gI~ 714 (1191)
.++.|++.+.++.|++.|+++.++|+-+...+..+-+..||.
T Consensus 215 ~~l~pGa~ElL~~Lk~~GiklaIaSn~~~~~~~~~L~~lgL~ 256 (381)
T PLN02575 215 YRLRTGSQEFVNVLMNYKIPMALVSTRPRKTLENAIGSIGIR 256 (381)
T ss_pred CCcCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCH
Confidence 357899999999999999999999999999999999999985
|
|
| >TIGR01685 MDP-1 magnesium-dependent phosphatase-1 | Back alignment and domain information |
|---|
Probab=93.19 E-value=0.61 Score=49.18 Aligned_cols=50 Identities=14% Similarity=0.104 Sum_probs=42.4
Q ss_pred EeeeecccCcCCchhHHHHHHHHhcCCcEEEEcCC-CHHHHHHHHHHcCCC
Q 001010 665 FAGFAVFNCPIREDSAKILSELKNSSQDLAMITGD-QALTACYVASQVHIV 714 (1191)
Q Consensus 665 flG~l~~~d~lK~da~~~I~~L~~agi~vvMiTGD-n~~TA~~VA~~~gI~ 714 (1191)
......-+-++.|++.++++.|+++|+++.++|+- ....+..+-...|+.
T Consensus 36 ~~~~~~~~~~l~pGv~elL~~Lk~~G~~l~I~Sn~~~~~~~~~~L~~~~l~ 86 (174)
T TIGR01685 36 IIDKSGTEVTLIKEVRDVLQTLKDAGTYLATASWNDVPEWAYEILGTFEIT 86 (174)
T ss_pred EEeCCCCEEEEcccHHHHHHHHHHCCCEEEEEeCCCChHHHHHHHHhCCcC
Confidence 44555556688999999999999999999999965 888888888888873
|
This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues. |
| >smart00775 LNS2 LNS2 domain | Back alignment and domain information |
|---|
Probab=93.15 E-value=0.69 Score=47.98 Aligned_cols=34 Identities=15% Similarity=0.110 Sum_probs=31.1
Q ss_pred cCcCCchhHHHHHHHHhcCCcEEEEcCCCHHHHH
Q 001010 672 NCPIREDSAKILSELKNSSQDLAMITGDQALTAC 705 (1191)
Q Consensus 672 ~d~lK~da~~~I~~L~~agi~vvMiTGDn~~TA~ 705 (1191)
++.+.|+++++++++++.|++++.+||.....+.
T Consensus 25 ~~~~~~~~~~a~~~l~~~G~~ivy~TGRp~~~~~ 58 (157)
T smart00775 25 KDWTHPGVAKLYRDIQNNGYKILYLTARPIGQAD 58 (157)
T ss_pred cCcCCHHHHHHHHHHHHcCCeEEEEcCCcHHHHH
Confidence 4677899999999999999999999999988874
|
This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance. |
| >PRK13478 phosphonoacetaldehyde hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=93.06 E-value=0.44 Score=53.77 Aligned_cols=42 Identities=10% Similarity=0.037 Sum_probs=36.8
Q ss_pred CcCCchhHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCC
Q 001010 673 CPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIV 714 (1191)
Q Consensus 673 d~lK~da~~~I~~L~~agi~vvMiTGDn~~TA~~VA~~~gI~ 714 (1191)
.++.|++.++|+.|++.|+++.++||.....+..+-+..|+.
T Consensus 100 ~~~~pg~~elL~~L~~~g~~l~I~T~~~~~~~~~~l~~~~l~ 141 (267)
T PRK13478 100 ATPIPGVLEVIAALRARGIKIGSTTGYTREMMDVVVPLAAAQ 141 (267)
T ss_pred CCCCCCHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHHhhc
Confidence 367899999999999999999999999998887777777764
|
|
| >PLN02580 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=93.00 E-value=0.89 Score=53.72 Aligned_cols=50 Identities=20% Similarity=0.266 Sum_probs=38.4
Q ss_pred EeecChh---hHHHHHHHHhHc-C---C---EEEEEcCCccCHHHHhh-----CCceEEeccCCC
Q 001010 783 FARVAPE---QKELILTTFKAV-G---R---MTLMCGDGTNDVGALKQ-----AHVGVALLNAVP 832 (1191)
Q Consensus 783 fAR~sP~---qK~~iV~~Lq~~-g---~---~V~m~GDG~ND~~ALk~-----AdVGIAl~~~~~ 832 (1191)
+-.+.|. +|...|+.|.+. | . .++++||+.||-.|++. +++||+|+++..
T Consensus 291 vlEVrP~~g~~KG~Av~~Ll~~~g~~~~d~~~pi~iGDD~TDedmF~~L~~~~~G~~I~Vgn~~~ 355 (384)
T PLN02580 291 VLEVRPVIDWNKGKAVEFLLESLGLSNCDDVLPIYIGDDRTDEDAFKVLREGNRGYGILVSSVPK 355 (384)
T ss_pred EEEEecCCCCCHHHHHHHHHHhcCCCcccceeEEEECCCchHHHHHHhhhccCCceEEEEecCCC
Confidence 3456664 899999887653 3 1 35899999999999996 589999997543
|
|
| >PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming] | Back alignment and domain information |
|---|
Probab=92.97 E-value=0.95 Score=59.25 Aligned_cols=38 Identities=16% Similarity=0.151 Sum_probs=32.1
Q ss_pred cCCchhHHHHHHH-HhcCCcEEEEcCCCHHHHHHHHHHc
Q 001010 674 PIREDSAKILSEL-KNSSQDLAMITGDQALTACYVASQV 711 (1191)
Q Consensus 674 ~lK~da~~~I~~L-~~agi~vvMiTGDn~~TA~~VA~~~ 711 (1191)
.+-+++.+++++| ++.|+.|+++||....+....-..+
T Consensus 616 ~p~~~~~~~L~~L~~d~g~~VaIvSGR~~~~L~~~f~~~ 654 (854)
T PLN02205 616 SPSSKSIDILNTLCRDKNNMVFIVSARSRKTLADWFSPC 654 (854)
T ss_pred CCCHHHHHHHHHHHhcCCCEEEEEeCCCHHHHHHHhCCC
Confidence 5567899999997 7789999999999999988776543
|
|
| >PRK06769 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=92.62 E-value=0.47 Score=49.93 Aligned_cols=28 Identities=14% Similarity=0.114 Sum_probs=25.5
Q ss_pred cCCchhHHHHHHHHhcCCcEEEEcCCCH
Q 001010 674 PIREDSAKILSELKNSSQDLAMITGDQA 701 (1191)
Q Consensus 674 ~lK~da~~~I~~L~~agi~vvMiTGDn~ 701 (1191)
++.|++++++++|++.|+++.++|+...
T Consensus 28 ~~~pgv~e~L~~Lk~~G~~l~I~Tn~~~ 55 (173)
T PRK06769 28 TLFPFTKASLQKLKANHIKIFSFTNQPG 55 (173)
T ss_pred EECCCHHHHHHHHHHCCCEEEEEECCch
Confidence 4789999999999999999999998764
|
|
| >PRK14988 GMP/IMP nucleotidase; Provisional | Back alignment and domain information |
|---|
Probab=92.57 E-value=0.6 Score=51.35 Aligned_cols=42 Identities=19% Similarity=0.255 Sum_probs=37.3
Q ss_pred CcCCchhHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCC
Q 001010 673 CPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIV 714 (1191)
Q Consensus 673 d~lK~da~~~I~~L~~agi~vvMiTGDn~~TA~~VA~~~gI~ 714 (1191)
.++.|++.+.++.|++.|+++.++|+-+...+...-+..|+.
T Consensus 92 ~~~~~g~~e~L~~Lk~~g~~~~i~Tn~~~~~~~~~l~~~~l~ 133 (224)
T PRK14988 92 AVLREDTVPFLEALKASGKRRILLTNAHPHNLAVKLEHTGLD 133 (224)
T ss_pred CCcCCCHHHHHHHHHhCCCeEEEEeCcCHHHHHHHHHHCCcH
Confidence 477899999999999999999999998888888777778874
|
|
| >PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated | Back alignment and domain information |
|---|
Probab=92.40 E-value=0.28 Score=60.01 Aligned_cols=42 Identities=7% Similarity=0.068 Sum_probs=39.2
Q ss_pred CcCCchhHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCC
Q 001010 673 CPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIV 714 (1191)
Q Consensus 673 d~lK~da~~~I~~L~~agi~vvMiTGDn~~TA~~VA~~~gI~ 714 (1191)
.++.|++.++++.|++.|+++.++|+-....+..+-+.+|+.
T Consensus 329 ~~l~pG~~e~L~~Lk~~g~~l~IvS~~~~~~~~~~l~~~~l~ 370 (459)
T PRK06698 329 GALYPNVKEIFTYIKENNCSIYIASNGLTEYLRAIVSYYDLD 370 (459)
T ss_pred CCcCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHCCcH
Confidence 378899999999999999999999999999999999999985
|
|
| >TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain | Back alignment and domain information |
|---|
Probab=92.20 E-value=0.34 Score=49.52 Aligned_cols=27 Identities=15% Similarity=0.314 Sum_probs=25.1
Q ss_pred cCCchhHHHHHHHHhcCCcEEEEcCCC
Q 001010 674 PIREDSAKILSELKNSSQDLAMITGDQ 700 (1191)
Q Consensus 674 ~lK~da~~~I~~L~~agi~vvMiTGDn 700 (1191)
++.|++.++++.|++.|+++.++|..+
T Consensus 27 ~~~~g~~~~l~~Lk~~g~~~~I~Sn~~ 53 (147)
T TIGR01656 27 QLRPGAVPALLTLRAAGYTVVVVTNQS 53 (147)
T ss_pred EEcCChHHHHHHHHHCCCEEEEEeCCC
Confidence 578999999999999999999999876
|
This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3. |
| >PLN02779 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=92.06 E-value=0.57 Score=53.60 Aligned_cols=38 Identities=11% Similarity=0.267 Sum_probs=32.7
Q ss_pred cCCchhHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHc
Q 001010 674 PIREDSAKILSELKNSSQDLAMITGDQALTACYVASQV 711 (1191)
Q Consensus 674 ~lK~da~~~I~~L~~agi~vvMiTGDn~~TA~~VA~~~ 711 (1191)
++.|++.+.++.|++.|+++.++|+-+......+-+..
T Consensus 144 ~l~pGv~elL~~L~~~g~~l~IvTn~~~~~~~~~l~~~ 181 (286)
T PLN02779 144 PLRPGVLRLMDEALAAGIKVAVCSTSNEKAVSKIVNTL 181 (286)
T ss_pred CchhhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHh
Confidence 67899999999999999999999998877776655544
|
|
| >TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668 | Back alignment and domain information |
|---|
Probab=92.04 E-value=0.42 Score=50.17 Aligned_cols=40 Identities=18% Similarity=0.208 Sum_probs=34.4
Q ss_pred cCCchhHHHHHHHHhcCCcEEEEcCCC-HHHHHHHHHHcCC
Q 001010 674 PIREDSAKILSELKNSSQDLAMITGDQ-ALTACYVASQVHI 713 (1191)
Q Consensus 674 ~lK~da~~~I~~L~~agi~vvMiTGDn-~~TA~~VA~~~gI 713 (1191)
.+-|++.++++.|++.|+++.++|+-+ ...+..+++.+|+
T Consensus 43 ~~~pgv~e~L~~Lk~~g~~l~I~Sn~~~~~~~~~~~~~~gl 83 (170)
T TIGR01668 43 EAYPALRDWIEELKAAGRKLLIVSNNAGEQRAKAVEKALGI 83 (170)
T ss_pred CcChhHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHcCC
Confidence 567999999999999999999999987 5667777777776
|
This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family. |
| >PLN02940 riboflavin kinase | Back alignment and domain information |
|---|
Probab=91.91 E-value=0.48 Score=56.46 Aligned_cols=97 Identities=19% Similarity=0.193 Sum_probs=65.0
Q ss_pred CcCCchhHHHHHHHHhcCCcEEEEcCCCHHHHHHHHH-HcCCCCCCcEEEeecCCCceeeecCCCccccccCChHHHhcc
Q 001010 673 CPIREDSAKILSELKNSSQDLAMITGDQALTACYVAS-QVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGL 751 (1191)
Q Consensus 673 d~lK~da~~~I~~L~~agi~vvMiTGDn~~TA~~VA~-~~gI~~~~~~il~~~~~~~~~~w~~~d~~~~~~~~~~~~~~~ 751 (1191)
.++.|++.++++.|++.|+++.++|+-....+...-+ ..|+...
T Consensus 92 ~~l~pGv~elL~~Lk~~g~~l~IvTn~~~~~~~~~l~~~~gl~~~----------------------------------- 136 (382)
T PLN02940 92 IKALPGANRLIKHLKSHGVPMALASNSPRANIEAKISCHQGWKES----------------------------------- 136 (382)
T ss_pred CCCCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhccChHhh-----------------------------------
Confidence 3567999999999999999999999998887766554 5666321
Q ss_pred cccceEEEechhhhhhcchHHHHhhcCcceEEeecChhhHHHHHHHHhHc---CCEEEEEcCCccCHHHHhhCCceEEe
Q 001010 752 TDAHDLCIGGDCFEMLQQTSAVLRVIPYVKVFARVAPEQKELILTTFKAV---GRMTLMCGDGTNDVGALKQAHVGVAL 827 (1191)
Q Consensus 752 ~~~~~l~itG~~l~~l~~~~~~~~~l~~~~VfAR~sP~qK~~iV~~Lq~~---g~~V~m~GDG~ND~~ALk~AdVGIAl 827 (1191)
.+.+++++. + .+..|+. ..+.+.+++. ...++|+||..+|+.|-++|++....
T Consensus 137 ---Fd~ii~~d~------------------v-~~~KP~p-~~~~~a~~~lgv~p~~~l~VGDs~~Di~aA~~aGi~~I~ 192 (382)
T PLN02940 137 ---FSVIVGGDE------------------V-EKGKPSP-DIFLEAAKRLNVEPSNCLVIEDSLPGVMAGKAAGMEVIA 192 (382)
T ss_pred ---CCEEEehhh------------------c-CCCCCCH-HHHHHHHHHcCCChhHEEEEeCCHHHHHHHHHcCCEEEE
Confidence 122222221 1 1223322 2333444443 45799999999999999999986433
|
|
| >KOG3120 consensus Predicted haloacid dehalogenase-like hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=91.40 E-value=0.64 Score=49.81 Aligned_cols=41 Identities=10% Similarity=0.182 Sum_probs=37.3
Q ss_pred cCCchhHHHHHHHHhcCC-cEEEEcCCCHHHHHHHHHHcCCC
Q 001010 674 PIREDSAKILSELKNSSQ-DLAMITGDQALTACYVASQVHIV 714 (1191)
Q Consensus 674 ~lK~da~~~I~~L~~agi-~vvMiTGDn~~TA~~VA~~~gI~ 714 (1191)
|+-|+..++|+.+++.|. .+++||--|..--..+-+..||.
T Consensus 84 P~~Pgmv~lik~~ak~g~~eliIVSDaNsfFIe~~Lea~~~~ 125 (256)
T KOG3120|consen 84 PIVPGMVRLIKSAAKLGCFELIIVSDANSFFIEEILEAAGIH 125 (256)
T ss_pred CCCccHHHHHHHHHhCCCceEEEEecCchhHHHHHHHHccHH
Confidence 788999999999999998 99999999998888888888874
|
|
| >TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E | Back alignment and domain information |
|---|
Probab=91.39 E-value=0.62 Score=47.53 Aligned_cols=38 Identities=16% Similarity=0.217 Sum_probs=33.3
Q ss_pred cCCchhHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHc
Q 001010 674 PIREDSAKILSELKNSSQDLAMITGDQALTACYVASQV 711 (1191)
Q Consensus 674 ~lK~da~~~I~~L~~agi~vvMiTGDn~~TA~~VA~~~ 711 (1191)
+..+++.+.++.|++.|+++.++|+-+...+....+..
T Consensus 64 ~~~~g~~e~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~ 101 (154)
T TIGR01549 64 AYIRGAADLLKRLKEAGIKLGIISNGSLRAQKLLLRKH 101 (154)
T ss_pred eeccCHHHHHHHHHHCcCeEEEEeCCchHHHHHHHHHH
Confidence 34578999999999999999999999998888877765
|
HAD subfamilies caused by an overly broad single model. |
| >PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated | Back alignment and domain information |
|---|
Probab=90.77 E-value=0.84 Score=48.27 Aligned_cols=27 Identities=15% Similarity=0.153 Sum_probs=25.0
Q ss_pred cCCchhHHHHHHHHhcCCcEEEEcCCC
Q 001010 674 PIREDSAKILSELKNSSQDLAMITGDQ 700 (1191)
Q Consensus 674 ~lK~da~~~I~~L~~agi~vvMiTGDn 700 (1191)
.+.|++.+++++|++.|+++.++|..+
T Consensus 29 ~~~pgv~e~L~~Lk~~g~~l~I~Tn~~ 55 (181)
T PRK08942 29 IPIPGSIEAIARLKQAGYRVVVATNQS 55 (181)
T ss_pred EECCCHHHHHHHHHHCCCEEEEEeCCc
Confidence 468999999999999999999999876
|
|
| >PRK09449 dUMP phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=90.66 E-value=0.79 Score=50.02 Aligned_cols=41 Identities=12% Similarity=0.194 Sum_probs=34.9
Q ss_pred CcCCchhHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCC
Q 001010 673 CPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIV 714 (1191)
Q Consensus 673 d~lK~da~~~I~~L~~agi~vvMiTGDn~~TA~~VA~~~gI~ 714 (1191)
.++.|++.++++.|+ .|+++.++|......+...-+..|+.
T Consensus 94 ~~~~~g~~~~L~~L~-~~~~~~i~Tn~~~~~~~~~l~~~~l~ 134 (224)
T PRK09449 94 CTPLPGAVELLNALR-GKVKMGIITNGFTELQQVRLERTGLR 134 (224)
T ss_pred CccCccHHHHHHHHH-hCCeEEEEeCCcHHHHHHHHHhCChH
Confidence 357899999999999 68999999998888777777778874
|
|
| >TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase | Back alignment and domain information |
|---|
Probab=89.78 E-value=1.2 Score=47.84 Aligned_cols=40 Identities=15% Similarity=0.238 Sum_probs=32.5
Q ss_pred cCCchhHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCC
Q 001010 674 PIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIV 714 (1191)
Q Consensus 674 ~lK~da~~~I~~L~~agi~vvMiTGDn~~TA~~VA~~~gI~ 714 (1191)
++-|++.++++.|++.|+++.++|+-.. ....+.+..|+.
T Consensus 105 ~~~~g~~~~l~~L~~~g~~~~i~Sn~~~-~~~~~l~~~~l~ 144 (203)
T TIGR02252 105 QVYPDAIKLLKDLRERGLILGVISNFDS-RLRGLLEALGLL 144 (203)
T ss_pred eeCcCHHHHHHHHHHCCCEEEEEeCCch-hHHHHHHHCCcH
Confidence 5779999999999999999999997554 346666777763
|
Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes. |
| >TIGR01261 hisB_Nterm histidinol-phosphatase | Back alignment and domain information |
|---|
Probab=88.85 E-value=1.2 Score=46.32 Aligned_cols=26 Identities=19% Similarity=0.300 Sum_probs=23.7
Q ss_pred cCCchhHHHHHHHHhcCCcEEEEcCC
Q 001010 674 PIREDSAKILSELKNSSQDLAMITGD 699 (1191)
Q Consensus 674 ~lK~da~~~I~~L~~agi~vvMiTGD 699 (1191)
++-|++.++++.|++.|+++.++|--
T Consensus 29 ~~~pgv~e~L~~L~~~g~~l~IvSN~ 54 (161)
T TIGR01261 29 RFEKGVIPALLKLKKAGYKFVMVTNQ 54 (161)
T ss_pred eECCCHHHHHHHHHHCCCeEEEEeCC
Confidence 56799999999999999999999974
|
This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis. |
| >TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase | Back alignment and domain information |
|---|
Probab=88.80 E-value=1.5 Score=48.07 Aligned_cols=41 Identities=10% Similarity=0.068 Sum_probs=34.1
Q ss_pred ccCcCCchhHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHc
Q 001010 671 FNCPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQV 711 (1191)
Q Consensus 671 ~~d~lK~da~~~I~~L~~agi~vvMiTGDn~~TA~~VA~~~ 711 (1191)
++.++.||+.+++++|+++|+++.++|..+......+-+..
T Consensus 92 ~~~~lypgv~e~L~~Lk~~G~~l~I~Sn~s~~~~~~~~~~~ 132 (220)
T TIGR01691 92 LTSHLYPDVPPALEAWLQLGLRLAVYSSGSVPAQKLLFGHS 132 (220)
T ss_pred cccCcCcCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHhhc
Confidence 35689999999999999999999999998877666555544
|
This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities. |
| >TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254 | Back alignment and domain information |
|---|
Probab=88.65 E-value=1.8 Score=46.89 Aligned_cols=41 Identities=10% Similarity=0.105 Sum_probs=37.1
Q ss_pred CcCCchhHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCC
Q 001010 673 CPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIV 714 (1191)
Q Consensus 673 d~lK~da~~~I~~L~~agi~vvMiTGDn~~TA~~VA~~~gI~ 714 (1191)
.++.|++.++++.|++. +++.++|+-....+..+.++.|+.
T Consensus 96 ~~~~~g~~~~L~~l~~~-~~~~i~Sn~~~~~~~~~l~~~~l~ 136 (224)
T TIGR02254 96 HQLLPGAFELMENLQQK-FRLYIVTNGVRETQYKRLRKSGLF 136 (224)
T ss_pred CeeCccHHHHHHHHHhc-CcEEEEeCCchHHHHHHHHHCCcH
Confidence 46789999999999999 999999999888888888888884
|
This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases. |
| >TIGR01675 plant-AP plant acid phosphatase | Back alignment and domain information |
|---|
Probab=88.63 E-value=2.6 Score=46.38 Aligned_cols=32 Identities=9% Similarity=0.202 Sum_probs=29.0
Q ss_pred cCcCCchhHHHHHHHHhcCCcEEEEcCCCHHH
Q 001010 672 NCPIREDSAKILSELKNSSQDLAMITGDQALT 703 (1191)
Q Consensus 672 ~d~lK~da~~~I~~L~~agi~vvMiTGDn~~T 703 (1191)
+.|.-|++.+.++.|++.|++|+++||.....
T Consensus 118 ~apaip~al~l~~~l~~~G~~Vf~lTGR~e~~ 149 (229)
T TIGR01675 118 AAPALPEGLKLYQKIIELGIKIFLLSGRWEEL 149 (229)
T ss_pred CCCCCHHHHHHHHHHHHCCCEEEEEcCCChHH
Confidence 45888999999999999999999999998755
|
This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases. |
| >smart00577 CPDc catalytic domain of ctd-like phosphatases | Back alignment and domain information |
|---|
Probab=88.39 E-value=0.44 Score=48.76 Aligned_cols=43 Identities=14% Similarity=0.052 Sum_probs=38.1
Q ss_pred ccCcCCchhHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCC
Q 001010 671 FNCPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIV 714 (1191)
Q Consensus 671 ~~d~lK~da~~~I~~L~~agi~vvMiTGDn~~TA~~VA~~~gI~ 714 (1191)
+.-++||++.+.++.|+ .++++.++|.=+...+..+-+.+|+.
T Consensus 42 ~~v~l~pG~~e~L~~L~-~~~~l~I~Ts~~~~~~~~il~~l~~~ 84 (148)
T smart00577 42 VYVKKRPGVDEFLKRAS-ELFELVVFTAGLRMYADPVLDLLDPK 84 (148)
T ss_pred EEEEECCCHHHHHHHHH-hccEEEEEeCCcHHHHHHHHHHhCcC
Confidence 34578999999999999 57999999999999999999988873
|
|
| >PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=88.38 E-value=1.7 Score=51.00 Aligned_cols=27 Identities=19% Similarity=0.267 Sum_probs=25.1
Q ss_pred cCcCCchhHHHHHHHHhcCCcEEEEcC
Q 001010 672 NCPIREDSAKILSELKNSSQDLAMITG 698 (1191)
Q Consensus 672 ~d~lK~da~~~I~~L~~agi~vvMiTG 698 (1191)
+.++.|++.+++++|++.|+++.++|.
T Consensus 28 ~~~l~pGV~e~L~~Lk~~G~kL~IvTN 54 (354)
T PRK05446 28 KLAFEPGVIPALLKLQKAGYKLVMVTN 54 (354)
T ss_pred cceECcCHHHHHHHHHhCCCeEEEEEC
Confidence 357899999999999999999999998
|
|
| >PLN02811 hydrolase | Back alignment and domain information |
|---|
Probab=87.67 E-value=1.8 Score=47.33 Aligned_cols=33 Identities=12% Similarity=0.243 Sum_probs=28.2
Q ss_pred cCcCCchhHHHHHHHHhcCCcEEEEcCCCHHHH
Q 001010 672 NCPIREDSAKILSELKNSSQDLAMITGDQALTA 704 (1191)
Q Consensus 672 ~d~lK~da~~~I~~L~~agi~vvMiTGDn~~TA 704 (1191)
..++.|++.+.|+.|++.|+++.++||-+....
T Consensus 76 ~~~l~~gv~e~l~~L~~~g~~~~i~S~~~~~~~ 108 (220)
T PLN02811 76 TSDLMPGAERLVRHLHAKGIPIAIATGSHKRHF 108 (220)
T ss_pred hCCCCccHHHHHHHHHHCCCcEEEEeCCchhhH
Confidence 346789999999999999999999999775533
|
|
| >TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family | Back alignment and domain information |
|---|
Probab=87.54 E-value=2.4 Score=47.82 Aligned_cols=43 Identities=2% Similarity=-0.030 Sum_probs=33.5
Q ss_pred cCcCCchhHHHHHHHHhcCCcEEEEcCCCHHH---HHHHHHHcCCC
Q 001010 672 NCPIREDSAKILSELKNSSQDLAMITGDQALT---ACYVASQVHIV 714 (1191)
Q Consensus 672 ~d~lK~da~~~I~~L~~agi~vvMiTGDn~~T---A~~VA~~~gI~ 714 (1191)
..++-|++.+.++.|++.|+++.++|+..... ....-+..|+.
T Consensus 116 ~a~~ipGA~e~L~~L~~~G~~v~iVTnR~~~~~~~T~~~Lkk~Gi~ 161 (266)
T TIGR01533 116 QAKPVAGALDFLNYANSKGVKIFYVSNRSEKEKAATLKNLKRFGFP 161 (266)
T ss_pred CCCcCccHHHHHHHHHHCCCeEEEEeCCCcchHHHHHHHHHHcCcC
Confidence 45678999999999999999999999976433 33444567774
|
which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles. |
| >TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC | Back alignment and domain information |
|---|
Probab=85.71 E-value=2.3 Score=42.35 Aligned_cols=39 Identities=15% Similarity=0.069 Sum_probs=33.8
Q ss_pred cCCchhHHHHHHHHhcCCcEEEEcCC-CHHHHHHHHHHcC
Q 001010 674 PIREDSAKILSELKNSSQDLAMITGD-QALTACYVASQVH 712 (1191)
Q Consensus 674 ~lK~da~~~I~~L~~agi~vvMiTGD-n~~TA~~VA~~~g 712 (1191)
++.+++.++++.|++.|+++.++|+- .+..+..+-+..+
T Consensus 29 ~~~~gv~e~L~~Lk~~g~~l~i~Sn~~~~~~~~~~l~~~~ 68 (128)
T TIGR01681 29 VTIKEIRDKLQTLKKNGFLLALASYNDDPHVAYELLKIFE 68 (128)
T ss_pred HHHHHHHHHHHHHHHCCeEEEEEeCCCCHHHHHHHHHhcc
Confidence 68999999999999999999999999 6766666666665
|
No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC. |
| >TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459 | Back alignment and domain information |
|---|
Probab=85.34 E-value=3.2 Score=46.13 Aligned_cols=48 Identities=6% Similarity=0.046 Sum_probs=36.0
Q ss_pred eeecccCcCCchhHHHHHHHHhcCCcEEEEcCCCHHHHH--HHHHHcCCC
Q 001010 667 GFAVFNCPIREDSAKILSELKNSSQDLAMITGDQALTAC--YVASQVHIV 714 (1191)
Q Consensus 667 G~l~~~d~lK~da~~~I~~L~~agi~vvMiTGDn~~TA~--~VA~~~gI~ 714 (1191)
|.+.-...+-|++.++++.|+++|+++.++|.-....+. ...++.|+.
T Consensus 17 G~l~~~~~~~pga~e~L~~L~~~G~~~~ivTN~~~~~~~~~~~L~~~gl~ 66 (242)
T TIGR01459 17 GVIIDGNHTYPGAVQNLNKIIAQGKPVYFVSNSPRNIFSLHKTLKSLGIN 66 (242)
T ss_pred cccccCCccCccHHHHHHHHHHCCCEEEEEeCCCCChHHHHHHHHHCCCC
Confidence 444556778899999999999999999999994433333 445677773
|
This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily) |
| >TIGR01664 DNA-3'-Pase DNA 3'-phosphatase | Back alignment and domain information |
|---|
Probab=84.26 E-value=3.3 Score=43.28 Aligned_cols=38 Identities=11% Similarity=0.214 Sum_probs=29.9
Q ss_pred CchhHHHHHHHHhcCCcEEEEcCCCHH------------HHHHHHHHcCC
Q 001010 676 REDSAKILSELKNSSQDLAMITGDQAL------------TACYVASQVHI 713 (1191)
Q Consensus 676 K~da~~~I~~L~~agi~vvMiTGDn~~------------TA~~VA~~~gI 713 (1191)
-|++.++++.|++.|+++.++|.-... .+..+-+.+|+
T Consensus 44 ~pgv~e~L~~Lk~~G~~l~I~TN~~~~~~~~~~~~~~~~~i~~~l~~~gl 93 (166)
T TIGR01664 44 YPEIPAKLQELDDEGYKIVIFTNQSGIGRGKLSAESFKNKIEAFLEKLKV 93 (166)
T ss_pred cCCHHHHHHHHHHCCCEEEEEeCCcccccCcccHHHHHHHHHHHHHHcCC
Confidence 489999999999999999999965432 34556677776
|
The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region. |
| >COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=83.88 E-value=3.6 Score=42.56 Aligned_cols=67 Identities=15% Similarity=0.196 Sum_probs=50.6
Q ss_pred HHHHHHhcCeeeeEEEEeCCCCChhhhhhccccccccCeEEeeeecccCcCCchhHHHHHHHHhcCCcEEEEcCCCHHHH
Q 001010 625 YKKYTHQGSRVLALAFKSLPDMTVSDARSLHRDEVENGLTFAGFAVFNCPIREDSAKILSELKNSSQDLAMITGDQALTA 704 (1191)
Q Consensus 625 ~~~~a~~G~RVLalA~k~l~~~~~~~~~~~~r~~~E~dL~flG~l~~~d~lK~da~~~I~~L~~agi~vvMiTGDn~~TA 704 (1191)
.+.+.++|.|-+.+- ++ -|++..= ....-|+.++-+.+++++|++++++|--+..-+
T Consensus 20 ~~~L~~~Gikgvi~D---lD------------------NTLv~wd--~~~~tpe~~~W~~e~k~~gi~v~vvSNn~e~RV 76 (175)
T COG2179 20 PDILKAHGIKGVILD---LD------------------NTLVPWD--NPDATPELRAWLAELKEAGIKVVVVSNNKESRV 76 (175)
T ss_pred HHHHHHcCCcEEEEe---cc------------------Cceeccc--CCCCCHHHHHHHHHHHhcCCEEEEEeCCCHHHH
Confidence 467788999987663 21 1221110 123568899999999999999999999999999
Q ss_pred HHHHHHcCCC
Q 001010 705 CYVASQVHIV 714 (1191)
Q Consensus 705 ~~VA~~~gI~ 714 (1191)
..+|+.+|+.
T Consensus 77 ~~~~~~l~v~ 86 (175)
T COG2179 77 ARAAEKLGVP 86 (175)
T ss_pred HhhhhhcCCc
Confidence 9999999984
|
|
| >TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase | Back alignment and domain information |
|---|
Probab=83.65 E-value=5.7 Score=41.79 Aligned_cols=28 Identities=21% Similarity=0.307 Sum_probs=24.8
Q ss_pred cCCchhHHHHHHHHhcCCcEEEEcCCCH
Q 001010 674 PIREDSAKILSELKNSSQDLAMITGDQA 701 (1191)
Q Consensus 674 ~lK~da~~~I~~L~~agi~vvMiTGDn~ 701 (1191)
++.|++.++|+.|+++|+++.++|.=+.
T Consensus 26 ~~~pgv~e~L~~Lk~~G~~l~i~TN~~~ 53 (176)
T TIGR00213 26 EFIDGVIDALRELKKMGYALVLVTNQSG 53 (176)
T ss_pred EECCCHHHHHHHHHHCCCEEEEEeCCcc
Confidence 3578999999999999999999997663
|
This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812). |
| >PLN02645 phosphoglycolate phosphatase | Back alignment and domain information |
|---|
Probab=83.19 E-value=3.4 Score=47.87 Aligned_cols=47 Identities=13% Similarity=0.193 Sum_probs=38.7
Q ss_pred eeecccCcCCchhHHHHHHHHhcCCcEEEEcCCCHHHHHHHH---HHcCC
Q 001010 667 GFAVFNCPIREDSAKILSELKNSSQDLAMITGDQALTACYVA---SQVHI 713 (1191)
Q Consensus 667 G~l~~~d~lK~da~~~I~~L~~agi~vvMiTGDn~~TA~~VA---~~~gI 713 (1191)
|.+.-.+.+=|++.++|++|++.|++++++|+....+...++ +++|+
T Consensus 37 Gtl~~~~~~~~ga~e~l~~lr~~g~~~~~~TN~~~~~~~~~~~~l~~lGi 86 (311)
T PLN02645 37 GVIWKGDKLIEGVPETLDMLRSMGKKLVFVTNNSTKSRAQYGKKFESLGL 86 (311)
T ss_pred CCeEeCCccCcCHHHHHHHHHHCCCEEEEEeCCCCCCHHHHHHHHHHCCC
Confidence 444445666699999999999999999999999988888877 45666
|
|
| >TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase | Back alignment and domain information |
|---|
Probab=83.06 E-value=2 Score=46.44 Aligned_cols=31 Identities=19% Similarity=0.219 Sum_probs=26.9
Q ss_pred cCcCCchhHHHHHHHHhcCCcEEEEcCCCHH
Q 001010 672 NCPIREDSAKILSELKNSSQDLAMITGDQAL 702 (1191)
Q Consensus 672 ~d~lK~da~~~I~~L~~agi~vvMiTGDn~~ 702 (1191)
..++.|++.++++.|++.|+++.++|.....
T Consensus 92 ~~~~~~~~~~~L~~L~~~g~~l~i~Sn~~~~ 122 (211)
T TIGR02247 92 NTKLRPSMMAAIKTLRAKGFKTACITNNFPT 122 (211)
T ss_pred ccccChhHHHHHHHHHHCCCeEEEEeCCCCc
Confidence 3467899999999999999999999987543
|
These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA. |
| >PHA02597 30 | Back alignment and domain information |
|---|
Probab=82.60 E-value=4.7 Score=43.00 Aligned_cols=39 Identities=15% Similarity=0.282 Sum_probs=27.0
Q ss_pred cCCchhHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCC
Q 001010 674 PIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHI 713 (1191)
Q Consensus 674 ~lK~da~~~I~~L~~agi~vvMiTGDn~~TA~~VA~~~gI 713 (1191)
++.|++.++++.|++.+ +.+++|.-+..+....-+.+|+
T Consensus 74 ~~~pG~~e~L~~L~~~~-~~~i~Tn~~~~~~~~~~~~~~l 112 (197)
T PHA02597 74 SAYDDALDVINKLKEDY-DFVAVTALGDSIDALLNRQFNL 112 (197)
T ss_pred cCCCCHHHHHHHHHhcC-CEEEEeCCccchhHHHHhhCCH
Confidence 57899999999999975 5666676444444434455555
|
2 hypothetical protein; Provisional |
| >COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=82.15 E-value=9.7 Score=41.09 Aligned_cols=38 Identities=16% Similarity=0.299 Sum_probs=33.2
Q ss_pred chhHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCC
Q 001010 677 EDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIV 714 (1191)
Q Consensus 677 ~da~~~I~~L~~agi~vvMiTGDn~~TA~~VA~~~gI~ 714 (1191)
..+.+++.+|+++|++|+.+|.-...--...-+.+|+-
T Consensus 26 ~pA~pv~~el~d~G~~Vi~~SSKT~aE~~~l~~~l~v~ 63 (274)
T COG3769 26 QPAAPVLLELKDAGVPVILCSSKTRAEMLYLQKSLGVQ 63 (274)
T ss_pred CccchHHHHHHHcCCeEEEeccchHHHHHHHHHhcCCC
Confidence 35789999999999999999998887778888888875
|
|
| >TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457 | Back alignment and domain information |
|---|
Probab=81.98 E-value=13 Score=41.63 Aligned_cols=49 Identities=10% Similarity=0.092 Sum_probs=39.0
Q ss_pred eeecccCcCCchhHHHHHHHHhcCCcEEEEcC---CCHHHHHHHHHHcCCCC
Q 001010 667 GFAVFNCPIREDSAKILSELKNSSQDLAMITG---DQALTACYVASQVHIVT 715 (1191)
Q Consensus 667 G~l~~~d~lK~da~~~I~~L~~agi~vvMiTG---Dn~~TA~~VA~~~gI~~ 715 (1191)
|.+.-.+.+=|++.++|++|++.|++++++|| ..+.......+++|+..
T Consensus 10 Gtl~~~~~~i~~a~~~l~~l~~~g~~~~~~Tnn~~r~~~~~~~~l~~~g~~~ 61 (249)
T TIGR01457 10 GTMYKGKERIPEAETFVHELQKRDIPYLFVTNNSTRTPESVAEMLASFDIPA 61 (249)
T ss_pred CceEcCCeeCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCC
Confidence 33334455567999999999999999999996 66777788888888863
|
This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those. |
| >PRK10563 6-phosphogluconate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=80.51 E-value=3.6 Score=44.74 Aligned_cols=39 Identities=3% Similarity=0.071 Sum_probs=32.0
Q ss_pred CcCCchhHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCC
Q 001010 673 CPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIV 714 (1191)
Q Consensus 673 d~lK~da~~~I~~L~~agi~vvMiTGDn~~TA~~VA~~~gI~ 714 (1191)
.++.|++.++++.| ++++.++|+.....+..+=+..|+.
T Consensus 87 ~~~~~gv~~~L~~L---~~~~~ivTn~~~~~~~~~l~~~~l~ 125 (221)
T PRK10563 87 LEPIAGANALLESI---TVPMCVVSNGPVSKMQHSLGKTGML 125 (221)
T ss_pred CCcCCCHHHHHHHc---CCCEEEEeCCcHHHHHHHHHhcChH
Confidence 46678999999998 4899999999887777776777774
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 1191 | ||||
| 3b8e_A | 998 | Crystal Structure Of The Sodium-Potassium Pump Leng | 4e-18 | ||
| 3n23_A | 992 | Crystal Structure Of The High Affinity Complex Betw | 3e-17 | ||
| 2dqs_A | 995 | Crystal Structure Of The Calcium Pump With Amppcp I | 4e-17 | ||
| 1kju_A | 994 | Ca2+-Atpase In The E2 State Length = 994 | 4e-17 | ||
| 3tlm_A | 992 | Crystal Structure Of Endoplasmic Reticulum Ca2+-Atp | 2e-16 | ||
| 3ba6_A | 994 | Structure Of The Ca2e1p Phosphoenzyme Intermediate | 3e-16 | ||
| 3b8c_A | 885 | Crystal Structure Of A Plasma Membrane Proton Pump | 4e-16 | ||
| 3ixz_A | 1034 | Pig Gastric H+K+-Atpase Complexed With Aluminium Fl | 4e-16 | ||
| 2zxe_A | 1028 | Crystal Structure Of The Sodium - Potassium Pump In | 2e-15 | ||
| 1mhs_A | 920 | Model Of Neurospora Crassa Proton Atpase Length = 9 | 3e-12 | ||
| 3rfu_A | 736 | Crystal Structure Of A Copper-Transporting Pib-Type | 4e-04 |
| >pdb|3B8E|A Chain A, Crystal Structure Of The Sodium-Potassium Pump Length = 998 | Back alignment and structure |
|
| >pdb|3N23|A Chain A, Crystal Structure Of The High Affinity Complex Between Ouabain And The E2p Form Of The Sodium-Potassium Pump Length = 992 | Back alignment and structure |
|
| >pdb|2DQS|A Chain A, Crystal Structure Of The Calcium Pump With Amppcp In The Absence Of Calcium Length = 995 | Back alignment and structure |
|
| >pdb|1KJU|A Chain A, Ca2+-Atpase In The E2 State Length = 994 | Back alignment and structure |
|
| >pdb|3TLM|A Chain A, Crystal Structure Of Endoplasmic Reticulum Ca2+-Atpase (Serca) From Bovine Muscle Length = 992 | Back alignment and structure |
|
| >pdb|3BA6|A Chain A, Structure Of The Ca2e1p Phosphoenzyme Intermediate Of The Serca Ca2+-Atpase Length = 994 | Back alignment and structure |
|
| >pdb|3B8C|A Chain A, Crystal Structure Of A Plasma Membrane Proton Pump Length = 885 | Back alignment and structure |
|
| >pdb|3IXZ|A Chain A, Pig Gastric H+K+-Atpase Complexed With Aluminium Fluoride Length = 1034 | Back alignment and structure |
|
| >pdb|2ZXE|A Chain A, Crystal Structure Of The Sodium - Potassium Pump In The E2.2k+.Pi State Length = 1028 | Back alignment and structure |
|
| >pdb|1MHS|A Chain A, Model Of Neurospora Crassa Proton Atpase Length = 920 | Back alignment and structure |
|
| >pdb|3RFU|A Chain A, Crystal Structure Of A Copper-Transporting Pib-Type Atpase Length = 736 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 1191 | |||
| 3b8c_A | 885 | ATPase 2, plasma membrane-type; P-type ATPase, pro | 6e-56 | |
| 1mhs_A | 920 | Proton pump, plasma membrane ATPase; ION transport | 6e-55 | |
| 2zxe_A | 1028 | Na, K-ATPase alpha subunit; membrane protein, ION | 2e-48 | |
| 3ixz_A | 1034 | Potassium-transporting ATPase alpha; ION pump, H+, | 9e-48 | |
| 3ar4_A | 995 | Sarcoplasmic/endoplasmic reticulum calcium ATPase; | 2e-43 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 7e-16 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 8e-05 | |
| 3gwi_A | 170 | Magnesium-transporting ATPase, P-type 1; P-type AT | 1e-15 | |
| 2yj3_A | 263 | Copper-transporting ATPase; hydrolase, P-type ATPa | 6e-07 | |
| 2yj3_A | 263 | Copper-transporting ATPase; hydrolase, P-type ATPa | 6e-05 | |
| 3skx_A | 280 | Copper-exporting P-type ATPase B; P1B-ATPase, ATP | 9e-06 | |
| 3skx_A | 280 | Copper-exporting P-type ATPase B; P1B-ATPase, ATP | 3e-04 | |
| 3rfu_A | 736 | Copper efflux ATPase; alpha helical, CPC, CXXC, AT | 1e-05 | |
| 3rfu_A | 736 | Copper efflux ATPase; alpha helical, CPC, CXXC, AT | 3e-04 | |
| 3j09_A | 723 | COPA, copper-exporting P-type ATPase A; copper tra | 2e-05 | |
| 3j09_A | 723 | COPA, copper-exporting P-type ATPase A; copper tra | 1e-04 | |
| 3j09_A | 723 | COPA, copper-exporting P-type ATPase A; copper tra | 3e-04 | |
| 3a1c_A | 287 | Probable copper-exporting P-type ATPase A; ATP-bin | 3e-05 | |
| 3a1c_A | 287 | Probable copper-exporting P-type ATPase A; ATP-bin | 2e-04 | |
| 3j08_A | 645 | COPA, copper-exporting P-type ATPase A; copper tra | 2e-04 | |
| 3j08_A | 645 | COPA, copper-exporting P-type ATPase A; copper tra | 2e-04 | |
| 3j08_A | 645 | COPA, copper-exporting P-type ATPase A; copper tra | 4e-04 | |
| 2hc8_A | 113 | PACS, cation-transporting ATPase, P-type; copper, | 8e-04 |
| >3b8c_A ATPase 2, plasma membrane-type; P-type ATPase, proton pump, ATP-binding, hydrogen ION transport, hydrolase, ION transport; HET: ACP; 3.60A {Arabidopsis thaliana} Length = 885 | Back alignment and structure |
|---|
Score = 209 bits (534), Expect = 6e-56
Identities = 131/597 (21%), Positives = 209/597 (35%), Gaps = 145/597 (24%)
Query: 259 VHRCGKWVKLAGTDLVPGDVVSIGRSSGQTGEDKSVPADMLILGGSAI-VNEAILTGEST 317
V R GKW + LVPGD+VSI G +PAD +L G + V+++ LTGES
Sbjct: 134 VLRDGKWSEQEAAILVPGDIVSI--KLGD-----IIPADARLLEGDPLKVDQSALTGESL 186
Query: 318 PQWKVSIMGRETGEKLSARRDKSHVLFGGTKILQHTPDKTFPLKTPDGGCLAVVLRTGFE 377
P K +F G+ Q G AVV+ TG
Sbjct: 187 PVTK----------------HPGQEVFSGSTCKQ-------------GEIEAVVIATGVH 217
Query: 378 TSQGKLMRTILFSTE------RVTANSWESGLFILFLVVFAVIAAGYVLKKGMEDPTRSK 431
T GK + + + +TA I +V +I + ++ D
Sbjct: 218 TFFGKAAHLVDSTNQVGHFQKVLTAIGNFCICSIAIGMVIEIIVMYPIQRRKYRD----- 272
Query: 432 YKLFLSCSLIITSVIPPE-LPMELSIAVNTSLIALARRGIFCTEPFRIP----FAGKVDM 486
+ L+I + P +P LS+ + L+++G R+ AG +D+
Sbjct: 273 -GIDNLLVLLIGGI--PIAMPTVLSVTMAIGSHRLSQQGAITK---RMTAIEEMAG-MDV 325
Query: 487 CCFDKTGTLTSDDMEFRGVVGLSNAELEDDMTKVPVRTQE--------ILASCHALVFVD 538
C DKTGTLT + + ++ ++ +V + E +AS
Sbjct: 326 LCSDKTGTLTLNKL-----------SVDKNLVEVFCKGVEKDQVLLFAAMASRVEN---- 370
Query: 539 NKLVGDPLEKAALKGIDWSYKSDEKAMPKRGGGNAVQIVQRHHFASHLKRMSVVVRVQE- 597
D ++ A + + K + + V F KR ++
Sbjct: 371 ----QDAIDAAMVGMLA-DPKEARAGIRE---------VHFLPFNPVDKRTALTYIDGSG 416
Query: 598 EFFAFVKGAPETIQDRLT---DLPSSYIETYKKYTHQGSRVLALAFKSLPDMTVSDARSL 654
+ KGAPE I + DL + KY +G R LA+A + +P+ T
Sbjct: 417 NWHRVSKGAPEQILELAKASNDLSKKVLSIIDKYAERGLRSLAVARQVVPEKT------- 469
Query: 655 HRDEVENGLTFAGFAVFNCPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIV 714
++ F G P R DSA+ + N ++ MITGDQ ++ +
Sbjct: 470 -KESPGAPWEFVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMG 528
Query: 715 TKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLTDAHDLCIGGDCFEMLQQTSAVL 774
T + + L + V
Sbjct: 529 TN----------------------------------MYPSSALLGTHKDANLAS--IPVE 552
Query: 775 RVIPYVKVFARVAPEQKELILTTFKAVGRMTLMCGDGTNDVGALKQAHVGVALLNAV 831
+I FA V PE K I+ + + M GDG ND ALK+A +G+A+ +A
Sbjct: 553 ELIEKADGFAGVFPEHKYEIVKKLQERKHIVGMTGDGVNDAPALKKADIGIAVADAT 609
|
| >1mhs_A Proton pump, plasma membrane ATPase; ION transport, membrane protein, P-type ATPase, active transport, cryo-electron microscopy; 8.00A {Neurospora crassa} SCOP: i.18.1.1 Length = 920 | Back alignment and structure |
|---|
Score = 206 bits (527), Expect = 6e-55
Identities = 112/595 (18%), Positives = 203/595 (34%), Gaps = 143/595 (24%)
Query: 259 VHRCGKWVKLAGTDLVPGDVVSIGRSSGQTGEDKSVPADMLILGGSAI--VNEAILTGES 316
V R G ++ ++VPGD++ + G +PAD I+ A V+++ LTGES
Sbjct: 182 VLRDGTLKEIEAPEVVPGDILQV--EEGTI-----IPADGRIVTDDAFLQVDQSALTGES 234
Query: 317 TPQWKVSIMGRETGEKLSARRDKSHVLFGGTKILQHTPDKTFPLKTPDGGCLAVVLRTGF 376
+K K +F + + + G V+ TG
Sbjct: 235 LAV-----------DK-----HKGDQVFASSAVKR-------------GEAFVVITATGD 265
Query: 377 ETSQGKLMRTILFSTERVT-------ANSWESGLFILFLVVFAVIAAGYVLKKGMEDPTR 429
T G+ + ++ + ++F ++ V + + +
Sbjct: 266 NTFVGRAAALVNAASGGSGHFTEVLNGIGTILLILVIFTLLI-VWVSSFYRSNPIVQ--- 321
Query: 430 SKYKLFLSCSLIITSVIPPE-LPMELSIAVNTSLIALARRGIFCTEPFRIP----FAGKV 484
L + ++ I V P LP ++ + LA++ ++ AG V
Sbjct: 322 ---ILEFTLAITIIGV--PVGLPAVVTTTMAVGAAYLAKKKAIVQ---KLSAIESLAG-V 372
Query: 485 DMCCFDKTGTLTSDDMEFRGVVGLSNAELEDDMTKVPVRTQEILASCHALVFVDNKLVGD 544
++ C DKTGTLT + + ++ + ED + LA+ K D
Sbjct: 373 EILCSDKTGTLTKNKLSLHDPYTVAGVDPED------LMLTACLAASR------KKKGID 420
Query: 545 PLEKAALKGIDWSYKSDEKAMPKRGGGNAVQIVQRHHFASHLKRMSVVVRVQE-EFFAFV 603
++KA LK + + + + +++Q H F K++ VV + E V
Sbjct: 421 AIDKAFLKSL-------KYYPRAKSVLSKYKVLQFHPFDPVSKKVVAVVESPQGERITCV 473
Query: 604 KGAPETIQDRLT-------DLPSSYIETYKKYTHQGSRVLALAFKSLPDMTVSDARSLHR 656
KGAP + + ++ +Y ++ +G R L +A K
Sbjct: 474 KGAPLFVLKTVEEDHPIPEEVDQAYKNKVAEFATRGFRSLGVARK--------------- 518
Query: 657 DEVENGLTFAGFAVFNCPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTK 716
E G P R D+ K + E K + M+TGD A + Q+ + T
Sbjct: 519 -RGEGSWEILGIMPCMDPPRHDTYKTVCEAKTLGLSIKMLTGDAVGIARETSRQLGLGTN 577
Query: 717 PVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLTDAHDLCIGGDCFEMLQQTSAVLRV 776
+ N + + S V
Sbjct: 578 -------IYNAER-------------LGLGGGGDMPG-----------------SEVYDF 600
Query: 777 IPYVKVFARVAPEQKELILTTFKAVGRMTLMCGDGTNDVGALKQAHVGVALLNAV 831
+ FA V P+ K ++ + G + M GDG ND +LK+A G+A+ +
Sbjct: 601 VEAADGFAEVFPQHKYNVVEILQQRGYLVAMTGDGVNDAPSLKKADTGIAVEGSS 655
|
| >2zxe_A Na, K-ATPase alpha subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_A* 3b8e_A* 3kdp_A* 3n2f_A* 3n23_A* 1mo7_A 1mo8_A* 1q3i_A Length = 1028 | Back alignment and structure |
|---|
Score = 186 bits (475), Expect = 2e-48
Identities = 136/663 (20%), Positives = 228/663 (34%), Gaps = 156/663 (23%)
Query: 255 QTIMVHRCGKWVKLAGTDLVPGDVVSIGRSSGQTGEDKSVPADM-LILGGSAIVNEAILT 313
Q +V R G+ + +V GD+V + + G D+ +PAD+ +I V+ + LT
Sbjct: 172 QQALVIRDGEKSTINAEFVVAGDLVEV-----KGG-DR-IPADLRIISAHGCKVDNSSLT 224
Query: 314 GESTPQWKVSIMGRETGEKLSARRDKSHVLFGGTKILQHTPDKTFPLKTPDGGCLAVVLR 373
GES PQ + + E R+ + F T ++ G VV+
Sbjct: 225 GESEPQTRSPEF---SSENPLETRN---IAFFSTNCVE-------------GTARGVVVY 265
Query: 374 TGFETSQGKL---------MRTILFSTERVTANSWESGLFILFLVVFAVIAAGYVLKKGM 424
TG T G++ RT + + +FL V +L
Sbjct: 266 TGDRTVMGRIATLASGLEVGRTPI--AIEIEHFIHIITGVAVFLGVS-FFILSLILGYSW 322
Query: 425 EDPTRSKYKLFLSC-SLIITSVIPPELP----MELSIAVNTSLIALARRGIFCTEPFRIP 479
+ + +I+ + +P L + L++ +AR+ +
Sbjct: 323 LE-------AVIFLIGIIV-ANVPEGLLATVTVCLTLTAKR----MARKNCLVK---NLE 367
Query: 480 FA----GKVDMCCFDKTGTLT----------SDDMEFR-GVVGLSNAELEDDMTKVPVRT 524
A G C DKTGTLT D+ + D +
Sbjct: 368 -AVETLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIHEADTTENQSGAAFDKTSATWSAL 426
Query: 525 QEILASCHALVFVDN---------KLVGDP----LEKAALK-GIDWSYKSDEKAMPKRGG 570
I A C+ VF + GD L K + PK
Sbjct: 427 SRIAALCNRAVFQAGQDNVPILKRSVAGDASESALLKCIELCCGS--VQGMRDRNPK--- 481
Query: 571 GNAVQIVQRHHFASHLKRMSVVVRVQE----EFFAFVKGAPETIQDR------------L 614
+ F S K + ++ + +KGAPE I DR L
Sbjct: 482 ------IVEIPFNSTNKYQLSIHENEKSSESRYLLVMKGAPERILDRCSTILLNGAEEPL 535
Query: 615 TD-LPSSYIETYKKYTHQGSRVLALAFKSLPDMTVSDARSLHRDE---VENGLTFAGFAV 670
+ + ++ Y + G RVL +LP+ ++ DE L F G
Sbjct: 536 KEDMKEAFQNAYLELGGLGERVLGFCHFALPEDKYNEGYPFDADEPNFPTTDLCFVGLMA 595
Query: 671 FNCPIREDSAKILSELKNSSQDLA-----MITGDQALTACYVASQVHIVTK--PVLILCP 723
P R + + ++ A M+TGD +TA +A V I+++ +
Sbjct: 596 MIDPPRAAVPDAVGKCRS-----AGIKVIMVTGDHPITAKAIAKGVGIISEGNETIEDIA 650
Query: 724 VKNGKVYEWVSPDETEKIQYSEKEVEGLTDAHDLCIGGDCFEMLQQTSAVLRVIPYVKVF 783
+ V+P + + +++ L+ E+L +L + VF
Sbjct: 651 ARLNIPIGQVNPRDAKACVVHGSDLKDLST-----------EVLDD---ILHYHTEI-VF 695
Query: 784 ARVAPEQKELILTTFKAVGRMTLMCGDGTNDVGALKQAHVGVALLNAVPPTQSGNSSSEA 843
AR +P+QK +I+ + G + + GDG ND ALK+A +GVA+ G S S+
Sbjct: 696 ARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAM---------GISGSDV 746
Query: 844 SKD 846
SK
Sbjct: 747 SKQ 749
|
| >3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2xzb_A 1iwc_A 1iwf_A Length = 1034 | Back alignment and structure |
|---|
Score = 185 bits (471), Expect = 9e-48
Identities = 124/662 (18%), Positives = 225/662 (33%), Gaps = 154/662 (23%)
Query: 255 QTIMVHRCGKWVKLAGTDLVPGDVVSIGRSSGQTGEDKSVPADM-LILGGSAIVNEAILT 313
Q V R G ++ LV GD+V + + G D+ VPAD+ ++ V+ + LT
Sbjct: 177 QQATVIRDGDKFQINADQLVVGDLVEM-----KGG-DR-VPADIRILQAQGRKVDNSSLT 229
Query: 314 GESTPQWKVSIMGRETGEKLSARRDKSHVLFGGTKILQHTPDKTFPLKTPDGGCLAVVLR 373
GES PQ + T E R+ + F T L+ G +V+
Sbjct: 230 GESEPQTRSPEC---THESPLETRN---IAFFSTMCLE-------------GTAQGLVVN 270
Query: 374 TGFETSQGK---LMRTI------LFSTERVTANSWESGLFILFLVVFAVIAAGYVLKKGM 424
TG T G+ L + + + + +
Sbjct: 271 TGDRTIIGRIASLASGVENEKTPI--AIEIEHFVDIIAGLAILFGA-TFFIVAMCIGYTF 327
Query: 425 EDPTRSKYKLFLSC-SLIITSVIPPELP----MELSIAVNTSLIALARRGIFCTEPFRIP 479
+ ++++ + +P L + LS+ LA + +
Sbjct: 328 LR-------AMVFFMAIVV-AYVPEGLLATVTVCLSLTAKR----LASKNCVVK---NLE 372
Query: 480 FA----GKVDMCCFDKTGTLT----------SDDMEFR-GVVGLSNAELEDDMTKVPVRT 524
A G + C DKTGTLT D+ + + D ++
Sbjct: 373 -AVETLGSTSVICSDKTGTLTQNRMTVSHLWFDNHIHSADTTEDQSGQTFDQSSETWRAL 431
Query: 525 QEILASCHALVFVDN---------KLVGDP----LEKAALKGIDWSYKSDEKAMPKRGGG 571
+L C+ F ++GD L K + + + + PK
Sbjct: 432 CRVLTLCNRAAFKSGQDAVPVPKRIVIGDASETALLKFSELTL-GNAMGYRERFPK---- 486
Query: 572 NAVQIVQRHHFASHLKRMSVVVRVQE----EFFAFVKGAPETIQDR------------LT 615
V F S K + +++ +KGAPE + +R L
Sbjct: 487 -----VCEIPFNSTNKFQLSIHTLEDPRDPRHVLVMKGAPERVLERCSSILIKGQELPLD 541
Query: 616 D-LPSSYIETYKKYTHQGSRVLALAFKSLPDMTVSDARSLHRDE---VENGLTFAGFAVF 671
+ ++ Y G RVL L + + + +GL+FAG
Sbjct: 542 EQWREAFQTAYLSLGGLGERVLGFCQLYLSEKDYPPGYAFDVEAMNFPTSGLSFAGLVSM 601
Query: 672 NCPIREDSAKILSELKNSSQDLA-----MITGDQALTACYVASQVHIVTK--PVLILCPV 724
P R + + + A M+TGD +TA +A+ V I+++ +
Sbjct: 602 IDPPRATVPDAVLKCRT-----AGIRVIMVTGDHPITAKAIAASVGIISEGSETVEDIAA 656
Query: 725 KNGKVYEWVSPDETEKIQYSEKEVEGLTDAHDLCIGGDCFEMLQQTSAVLRVIPYVKVFA 784
+ + V+ + + +++ + L + + VFA
Sbjct: 657 RLRVPVDQVNRKDARACVINGMQLKDMDP-----------SELVEALRTHPEM----VFA 701
Query: 785 RVAPEQKELILTTFKAVGRMTLMCGDGTNDVGALKQAHVGVALLNAVPPTQSGNSSSEAS 844
R +P+QK +I+ + + +G + + GDG ND ALK+A +GVA+ G + S+A+
Sbjct: 702 RTSPQQKLVIVESCQRLGAIVAVTGDGVNDSPALKKADIGVAM---------GIAGSDAA 752
Query: 845 KD 846
K+
Sbjct: 753 KN 754
|
| >3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ... Length = 995 | Back alignment and structure |
|---|
Score = 171 bits (435), Expect = 2e-43
Identities = 151/667 (22%), Positives = 236/667 (35%), Gaps = 175/667 (26%)
Query: 259 VHRCGKWV--KLAGTDLVPGDVVSIGRSSGQTGEDKSVPADMLILGGSAI---VNEAILT 313
V+R + ++ D+VPGD+V + + G DK VPAD+ IL + V+++ILT
Sbjct: 130 VYRADRKSVQRIKARDIVPGDIVEV--AVG----DK-VPADIRILSIKSTTLRVDQSILT 182
Query: 314 GESTPQWKVSIMGRETGEKLSARRDKSHVLFGGTKILQHTPDKTFPLKTPDGGCLAVVLR 373
GES K + + DK ++LF GT I G L +V
Sbjct: 183 GESVSVIKHTEPVPDPRAVNQ---DKKNMLFSGTNIAA-------------GKALGIVAT 226
Query: 374 TGFETSQGKLMRTILFSTERVT----------ANSWESGLFILFLVVFAV-IAAGYVLKK 422
TG T GK+ R + +TE+ + ++ + V+ + I
Sbjct: 227 TGVSTEIGKI-RDQMAATEQDKTPLQQKLDEFGEQLSKVISLICVAVWLINIGHFNDPVH 285
Query: 423 GMEDPTRSKYKLFLSCSLIITSVIPPELPMELSIAVNTSLIAL-----ARRGIFCTEPFR 477
G + Y ++ +L + + IP LP AV T+ +AL A++
Sbjct: 286 GGSWIRGAIYYFKIAVALAV-AAIPEGLP-----AVITTCLALGTRRMAKKN-------- 331
Query: 478 IPFA-----------GKVDMCCFDKTGTLTSDDM-------------------EFR---- 503
A G + C DKTGTLT++ M EF
Sbjct: 332 ---AIVRSLPSVETLGCTSVICSDKTGTLTTNQMSVCKMFIIDKVDGDFCSLNEFSITGS 388
Query: 504 -----GVVGLSNAELEDDMTKVPVRTQEILASC-HALVFVDNK-----LVGDPLEKA--- 549
G V ++ + V I A C + + + VG+ E A
Sbjct: 389 TYAPEGEVLKNDKPIRSGQFDGLVELATICALCNDSSLDFNETKGVYEKVGEATETALTT 448
Query: 550 -ALKGIDWSYKSDEKAMPKRGGGNAVQIVQRHH------FASHLKRMSVVVRVQEE---- 598
K ++ + + +R I Q F+ K MSV +
Sbjct: 449 LVEKMNVFNTEVRNLSKVERANACNSVIRQLMKKEFTLEFSRDRKSMSVYCSPAKSSRAA 508
Query: 599 --FFAFVKGAPETIQDR------------LTD-LPSSYIETYKKYT--HQGSRVLALAFK 641
FVKGAPE + DR +T + + K++ R LALA +
Sbjct: 509 VGNKMFVKGAPEGVIDRCNYVRVGTTRVPMTGPVKEKILSVIKEWGTGRDTLRCLALATR 568
Query: 642 SLPDM--TVSDARSLHRDEVENGLTFAGFAVFNCPIREDSAKILSELKNSSQDLAMITGD 699
P + S E E LTF G P R++ + +++ + MITGD
Sbjct: 569 DTPPKREEMVLDDSSRFMEYETDLTFVGVVGMLDPPRKEVMGSIQLCRDAGIRVIMITGD 628
Query: 700 QALTACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLTDAHDLCI 759
TA + ++ I + + G+ E + L A
Sbjct: 629 NKGTAIAICRRIGIFGENEEVADRAYTGR------------------EFDDLPLA----- 665
Query: 760 GGDCFEMLQQTSAVLRVIPYVKVFARVAPEQKELILTTFKAVGRMTLMCGDGTNDVGALK 819
+Q A R FARV P K I+ ++ +T M GDG ND ALK
Sbjct: 666 --------EQREACRRA----CCFARVEPSHKSKIVEYLQSYDEITAMTGDGVNDAPALK 713
Query: 820 QAHVGVA 826
+A +G+A
Sbjct: 714 KAEIGIA 720
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 82.2 bits (202), Expect = 7e-16
Identities = 87/663 (13%), Positives = 173/663 (26%), Gaps = 198/663 (29%)
Query: 121 PVDEDEICFDFRKQHFIYSREKGTFCK------LPYPTKETFGYYL---KCTGHSTEAKI 171
V ED +F + + K K + + L + +
Sbjct: 23 SVFEDAFVDNFDCKD-VQDMPKSILSKEEIDHIIMSKDAVSGTLRLFWTLLSKQEEMVQK 81
Query: 172 AVATE-----KWGRNVF--EYPQPTFQKLMKENCMEPFF-VFQVFCVGLWCLDEYWYYSL 223
V K+ + E QP+ M + + QVF
Sbjct: 82 FVEEVLRINYKFLMSPIKTEQRQPSMMTRMYIEQRDRLYNDNQVF--------------- 126
Query: 224 FTLFMLFMFESTMAKSRLKTLTEIRR----VRVDNQTIMVHR---CGKWVKLAG------ 270
+ SRL+ ++R+ +R + +++ GK +A
Sbjct: 127 ----------AKYNVSRLQPYLKLRQALLELR-PAKNVLIDGVLGSGKTW-VALDVCLSY 174
Query: 271 --TDLVPGDV--VSIGRSSGQTGEDKSVPADM--LILGGSAIVNEAILTGESTPQWKVSI 324
+ + +++ + ++V + L+ + SI
Sbjct: 175 KVQCKMDFKIFWLNLKNCN----SPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSI 230
Query: 325 MGRETGEKLSARRDKSHVLFGGTKILQHTPDKTFPLKTPDGGCLAVVLRTGFETSQGKLM 384
+L + + L +L + + + C
Sbjct: 231 QAEL--RRLLKSKPYENCLL----VLLNVQNAKA-WNAFNLSC----------------- 266
Query: 385 RTILFSTERVTANSWESGLFILFLVVFAVIAAGYVLKKGMEDPTRSKYK-----LFLSCS 439
IL +T R V ++A ++ + + L L
Sbjct: 267 -KILLTT-RFKQ-------------VTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYL 311
Query: 440 LIITSVIPPEL----PMELSIAVNTSLIALARRGIFCT-EPFRIPFAGKVDMC---CFDK 491
+P E+ P LS +IA + R T + ++ K+ +
Sbjct: 312 DCRPQDLPREVLTTNPRRLS------IIAESIRDGLATWDNWKHVNCDKLTTIIESSLNV 365
Query: 492 TGTLTSDDME--FRGVVGLSNAELEDDMTKVPVRT-------------QEILASCH--AL 534
L + F + + +P ++ H +L
Sbjct: 366 ---LEPAEYRKMFDRL-----SVFPPS-AHIPTILLSLIWFDVIKSDVMVVVNKLHKYSL 416
Query: 535 VFVDNK------------LVGDPLEKAAL--KGIDWSYKSDEKAMPKRGGGNAVQIVQRH 580
V K L + AL +D Y + +
Sbjct: 417 VEKQPKESTISIPSIYLELKVKLENEYALHRSIVD-HYNIPKTFDSDDLIPPYLDQYFYS 475
Query: 581 HFASHLKRMSVVVRVQEEF------FAFVK----------GAPETIQDRLTDLPSSYIET 624
H HLK + R+ F F F++ A +I + L L +
Sbjct: 476 HIGHHLKNIEHPERM-TLFRMVFLDFRFLEQKIRHDSTAWNASGSILNTLQQL-----KF 529
Query: 625 YKKY----THQGSRVLALAFKSLPDMTVSDARSLHRDEVENGLTFAGFAVFNCPIREDSA 680
YK Y + R++ LP + + S + D + L A+F E++
Sbjct: 530 YKPYICDNDPKYERLVNAILDFLPKIEENLICSKYTDLLRIALMAEDEAIF-----EEAH 584
Query: 681 KIL 683
K +
Sbjct: 585 KQV 587
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 46.0 bits (108), Expect = 8e-05
Identities = 68/531 (12%), Positives = 142/531 (26%), Gaps = 173/531 (32%)
Query: 325 MGRETGEKLSARRDKSHVLFGGTKILQHTPD---KTFPLK-TPDGGCLAVVLRTGFETSQ 380
M ETGE +D IL D F K D
Sbjct: 7 MDFETGEHQYQYKD----------ILSVFEDAFVDNFDCKDVQD---------------- 40
Query: 381 GKLMRTILFSTER---VTANSWESGLFILFLV------------VFAVIAAGY-----VL 420
+ ++IL E + + SG LF V V+ Y +
Sbjct: 41 --MPKSILSKEEIDHIIMSKDAVSGTLRLFWTLLSKQEEMVQKFVEEVLRINYKFLMSPI 98
Query: 421 KKGMEDPTRSKYKLFLSCSLIITSVIPPELPM----------------ELS----IAVN- 459
K P+ ++++ + + EL + ++
Sbjct: 99 KTEQRQPSM-MTRMYIEQRDRLYNDNQVFAKYNVSRLQPYLKLRQALLELRPAKNVLIDG 157
Query: 460 ------TSLIALARR--GIFCTEPFRIPFAGKVDMCCFDKTGTLTSDDMEFRGVVGLSNA 511
T + + C F+I F + C + T+ + + +
Sbjct: 158 VLGSGKTWVALDVCLSYKVQCKMDFKI-FWLNLKNC--NSPETVLEMLQKLLYQIDPNWT 214
Query: 512 ELEDDMTKVPVRTQEI-------LAS---CHALVFVDNKLVGDPLEKAALKGIDWSYK-- 559
D + + +R I L S + L+ + N V + A + S K
Sbjct: 215 SRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLN--VQNA---KAWNAFNLSCKIL 269
Query: 560 ---SDEKAMPKRGGGNAVQIVQRHHFASHLKRMSVVVRVQEEFFA-------------FV 603
++ I HH + + +
Sbjct: 270 LTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEV------KSLLLKYLDCRPQDLPREVL 323
Query: 604 KGAP---ETIQDRLTDLPSSYIETYKKYTH-QGSRVLALAFKSL-PDMTVSDARSLHRDE 658
P I + + D ++ + +K + + ++ + L P + R +
Sbjct: 324 TTNPRRLSIIAESIRDGLAT-WDNWKHVNCDKLTTIIESSLNVLEPA----EYRKMFDR- 377
Query: 659 VENGLTFAGFAVF--NCPI-------------REDSAKILSELKNSSQDLAMITGDQA-- 701
+VF + I + D ++++L S ++
Sbjct: 378 ---------LSVFPPSAHIPTILLSLIWFDVIKSDVMVVVNKLHKYS----LVEKQPKES 424
Query: 702 ---LTACYVASQVHIVTKPVL---ILCPVKNGKVYEW--VSPDETEKIQYS 744
+ + Y+ +V + + L I+ K ++ + P ++ YS
Sbjct: 425 TISIPSIYLELKVKLENEYALHRSIVDHYNIPKTFDSDDLIPPYLDQYFYS 475
|
| >3gwi_A Magnesium-transporting ATPase, P-type 1; P-type ATPase, nucleotide binding, ATP binding, MGTA, membra protein, cell inner membrane; 1.60A {Escherichia coli} Length = 170 | Back alignment and structure |
|---|
Score = 74.9 bits (185), Expect = 1e-15
Identities = 36/150 (24%), Positives = 52/150 (34%), Gaps = 29/150 (19%)
Query: 542 VGDPLEKAALKGID-WSYKSDEKAMPKRGGGNAVQIVQRHHFASHLKRMSVVVRVQ-EEF 599
+ + L+ A L+G D S +S K + F +RMSVVV E
Sbjct: 32 LKNLLDTAVLEGTDEESARSLASRWQK---------IDEIPFDFERRRMSVVVAENTEHH 82
Query: 600 FAFVKGAPETIQDR------------LTDLPSSYI-ETYKKYTHQGSRVLALAFKSLPDM 646
KGA + I + L D+ I QG RV+A+A K LP
Sbjct: 83 QLVCKGALQEILNVCSQVRHNGEIVPLDDIMLRKIKRVTDTLNRQGLRVVAVATKYLP-- 140
Query: 647 TVSDARSLHRDEVENGLTFAGFAVFNCPIR 676
++ E+ L G+ F
Sbjct: 141 ---AREGDYQRADESDLILEGYIAFLDHHH 167
|
| >2yj3_A Copper-transporting ATPase; hydrolase, P-type ATPase, COPB, heavy metal translocation; 2.20A {Sulfolobus solfataricus} PDB: 2iye_A 2yj6_A* 2yj5_A* 2yj4_A* Length = 263 | Back alignment and structure |
|---|
Score = 51.3 bits (124), Expect = 6e-07
Identities = 19/46 (41%), Positives = 25/46 (54%)
Query: 781 KVFARVAPEQKELILTTFKAVGRMTLMCGDGTNDVGALKQAHVGVA 826
+ ++ ++PE K I+ K G LM GDG ND AL A V VA
Sbjct: 177 EYYSNLSPEDKVRIIEKLKQNGNKVLMIGDGVNDAAALALADVSVA 222
|
| >2yj3_A Copper-transporting ATPase; hydrolase, P-type ATPase, COPB, heavy metal translocation; 2.20A {Sulfolobus solfataricus} PDB: 2iye_A 2yj6_A* 2yj5_A* 2yj4_A* Length = 263 | Back alignment and structure |
|---|
Score = 45.1 bits (108), Expect = 6e-05
Identities = 8/40 (20%), Positives = 20/40 (50%)
Query: 674 PIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHI 713
R + L +LKN + +++GD+ ++ +++I
Sbjct: 136 VPRPNLKDYLEKLKNEGLKIIILSGDKEDKVKELSKELNI 175
|
| >3skx_A Copper-exporting P-type ATPase B; P1B-ATPase, ATP binding domain, copper(II) transporter, MEMB protein, hydrolase; 1.59A {Archaeoglobus fulgidus} PDB: 3sky_A* Length = 280 | Back alignment and structure |
|---|
Score = 47.8 bits (115), Expect = 9e-06
Identities = 19/46 (41%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Query: 781 KVFARVAPEQKELILTTFKAVGRMTLMCGDGTNDVGALKQAHVGVA 826
FA V P +K + + +T M GDG ND AL QA VG+A
Sbjct: 185 DYFAEVLPHEKAEKVKEVQQ-KYVTAMVGDGVNDAPALAQADVGIA 229
|
| >3skx_A Copper-exporting P-type ATPase B; P1B-ATPase, ATP binding domain, copper(II) transporter, MEMB protein, hydrolase; 1.59A {Archaeoglobus fulgidus} PDB: 3sky_A* Length = 280 | Back alignment and structure |
|---|
Score = 43.2 bits (103), Expect = 3e-04
Identities = 13/40 (32%), Positives = 22/40 (55%)
Query: 674 PIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHI 713
IR +S + +S+LK M+TGD A +VA ++ +
Sbjct: 144 RIRPESREAISKLKAIGIKCMMLTGDNRFVAKWVAEELGL 183
|
| >3rfu_A Copper efflux ATPase; alpha helical, CPC, CXXC, ATP-binding, hydrolase, ION transp magnesium, Cu+, membrane, metal-binding; 3.20A {Legionella pneumophila subsp} Length = 736 | Back alignment and structure |
|---|
Score = 48.7 bits (117), Expect = 1e-05
Identities = 20/46 (43%), Positives = 27/46 (58%)
Query: 781 KVFARVAPEQKELILTTFKAVGRMTLMCGDGTNDVGALKQAHVGVA 826
KV A + PE K I++ K G + M GDG ND AL +A +G+A
Sbjct: 595 KVVAEIMPEDKSRIVSELKDKGLIVAMAGDGVNDAPALAKADIGIA 640
|
| >3rfu_A Copper efflux ATPase; alpha helical, CPC, CXXC, ATP-binding, hydrolase, ION transp magnesium, Cu+, membrane, metal-binding; 3.20A {Legionella pneumophila subsp} Length = 736 | Back alignment and structure |
|---|
Score = 44.1 bits (105), Expect = 3e-04
Identities = 14/40 (35%), Positives = 23/40 (57%)
Query: 674 PIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHI 713
PI+ + + + EL+ S ++ M+TGD TA VA + I
Sbjct: 554 PIKSSTPETILELQQSGIEIVMLTGDSKRTAEAVAGTLGI 593
|
| >3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} Length = 723 | Back alignment and structure |
|---|
Score = 47.5 bits (114), Expect = 2e-05
Identities = 25/119 (21%), Positives = 58/119 (48%), Gaps = 26/119 (21%)
Query: 219 WYYSLFTLFMLFM-----FESTM-------------AKSRLKTLTEIRR-VRVDNQTIMV 259
+ S+ + + +E+++ A+++ +T I++ V + +T +V
Sbjct: 156 FLASVLSTAGVLPREYSFYETSVLLLAFLLLGRTLEARAKSRTGEAIKKLVGLQAKTAVV 215
Query: 260 HRCGKWVKLAGTDLVPGDVVSIGRSSGQTGEDKSVPADMLILGGSAIVNEAILTGESTP 318
R GK + + ++ GD+V + R GE +P D +++ G + V+E++++GE P
Sbjct: 216 IRDGKEIAVPVEEVAVGDIVIV-RP----GE--KIPVDGVVVEGESYVDESMISGEPVP 267
|
| >3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} Length = 723 | Back alignment and structure |
|---|
Score = 45.6 bits (109), Expect = 1e-04
Identities = 18/46 (39%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Query: 781 KVFARVAPEQKELILTTFKAVGRMTLMCGDGTNDVGALKQAHVGVA 826
V A V P QK + +A + GDG ND AL QA +G+A
Sbjct: 576 LVIAEVLPHQKSEEVKKLQA-KEVVAFVGDGINDAPALAQADLGIA 620
|
| >3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} Length = 723 | Back alignment and structure |
|---|
Score = 44.0 bits (105), Expect = 3e-04
Identities = 10/40 (25%), Positives = 22/40 (55%)
Query: 674 PIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHI 713
++E + + ELK + MITGD +A ++ ++++
Sbjct: 535 TLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNL 574
|
| >3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I Length = 287 | Back alignment and structure |
|---|
Score = 46.3 bits (111), Expect = 3e-05
Identities = 18/46 (39%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Query: 781 KVFARVAPEQKELILTTFKAVGRMTLMCGDGTNDVGALKQAHVGVA 826
V A V P QK + +A + GDG ND AL QA +G+A
Sbjct: 204 LVIAEVLPHQKSEEVKKLQA-KEVVAFVGDGINDAPALAQADLGIA 248
|
| >3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I Length = 287 | Back alignment and structure |
|---|
Score = 44.0 bits (105), Expect = 2e-04
Identities = 10/40 (25%), Positives = 22/40 (55%)
Query: 674 PIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHI 713
++E + + ELK + MITGD +A ++ ++++
Sbjct: 163 TLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNL 202
|
| >3j08_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} Length = 645 | Back alignment and structure |
|---|
Score = 44.8 bits (107), Expect = 2e-04
Identities = 26/120 (21%), Positives = 58/120 (48%), Gaps = 28/120 (23%)
Query: 219 WYYSLFTLFMLFM-----FESTM-------------AKSRLKTLTEIRRVRVDNQ--TIM 258
+ S+ + + +E+++ A+++ +T I+++ V Q T +
Sbjct: 78 FLASVLSTAGVLPREYSFYETSVLLLAFLLLGRTLEARAKSRTGEAIKKL-VGLQAKTAV 136
Query: 259 VHRCGKWVKLAGTDLVPGDVVSIGRSSGQTGEDKSVPADMLILGGSAIVNEAILTGESTP 318
V R GK + + ++ GD+V + R GE +P D +++ G + V+E++++GE P
Sbjct: 137 VIRDGKEIAVPVEEVAVGDIVIV-RP----GE--KIPVDGVVVEGESYVDESMISGEPVP 189
|
| >3j08_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} Length = 645 | Back alignment and structure |
|---|
Score = 44.4 bits (106), Expect = 2e-04
Identities = 18/46 (39%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Query: 781 KVFARVAPEQKELILTTFKAVGRMTLMCGDGTNDVGALKQAHVGVA 826
V A V P QK + +A + GDG ND AL QA +G+A
Sbjct: 498 LVIAEVLPHQKSEEVKKLQA-KEVVAFVGDGINDAPALAQADLGIA 542
|
| >3j08_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} Length = 645 | Back alignment and structure |
|---|
Score = 43.3 bits (103), Expect = 4e-04
Identities = 10/40 (25%), Positives = 22/40 (55%)
Query: 674 PIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHI 713
++E + + ELK + MITGD +A ++ ++++
Sbjct: 457 TLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNL 496
|
| >2hc8_A PACS, cation-transporting ATPase, P-type; copper, COPA, COPB, actuator, transport protein; 1.65A {Archaeoglobus fulgidus} PDB: 2voy_F Length = 113 | Back alignment and structure |
|---|
Score = 39.4 bits (93), Expect = 8e-04
Identities = 19/64 (29%), Positives = 37/64 (57%), Gaps = 7/64 (10%)
Query: 255 QTIMVHRCGKWVKLAGTDLVPGDVVSIGRSSGQTGEDKSVPADMLILGGSAIVNEAILTG 314
+T +V R GK + + ++ GD+V + R GE +P D +++ G + V+E++++G
Sbjct: 12 KTAVVIRDGKEIAVPVEEVAVGDIVIV-RP----GE--KIPVDGVVVEGESYVDESMISG 64
Query: 315 ESTP 318
E P
Sbjct: 65 EPVP 68
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 1191 | |||
| 2zxe_A | 1028 | Na, K-ATPase alpha subunit; membrane protein, ION | 100.0 | |
| 3ixz_A | 1034 | Potassium-transporting ATPase alpha; ION pump, H+, | 100.0 | |
| 3ar4_A | 995 | Sarcoplasmic/endoplasmic reticulum calcium ATPase; | 100.0 | |
| 1mhs_A | 920 | Proton pump, plasma membrane ATPase; ION transport | 100.0 | |
| 3b8c_A | 885 | ATPase 2, plasma membrane-type; P-type ATPase, pro | 100.0 | |
| 3rfu_A | 736 | Copper efflux ATPase; alpha helical, CPC, CXXC, AT | 100.0 | |
| 3j08_A | 645 | COPA, copper-exporting P-type ATPase A; copper tra | 100.0 | |
| 3j09_A | 723 | COPA, copper-exporting P-type ATPase A; copper tra | 100.0 | |
| 2yj3_A | 263 | Copper-transporting ATPase; hydrolase, P-type ATPa | 99.85 | |
| 2hc8_A | 113 | PACS, cation-transporting ATPase, P-type; copper, | 99.9 | |
| 2kij_A | 124 | Copper-transporting ATPase 1; actuator, menkes dis | 99.88 | |
| 3a1c_A | 287 | Probable copper-exporting P-type ATPase A; ATP-bin | 99.88 | |
| 3skx_A | 280 | Copper-exporting P-type ATPase B; P1B-ATPase, ATP | 99.78 | |
| 4fe3_A | 297 | Cytosolic 5'-nucleotidase 3; substrate complex, HA | 99.75 | |
| 3gwi_A | 170 | Magnesium-transporting ATPase, P-type 1; P-type AT | 99.62 | |
| 3n07_A | 195 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; | 98.62 | |
| 3ij5_A | 211 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; | 98.6 | |
| 3mn1_A | 189 | Probable YRBI family phosphatase; structural genom | 98.58 | |
| 3ewi_A | 168 | N-acylneuraminate cytidylyltransferase; beta barre | 98.52 | |
| 1k1e_A | 180 | Deoxy-D-mannose-octulosonate 8-phosphate phosphat; | 98.5 | |
| 1l6r_A | 227 | Hypothetical protein TA0175; structural genomics, | 98.49 | |
| 3n28_A | 335 | Phosphoserine phosphatase; HAD family hydrolase, s | 98.46 | |
| 3mmz_A | 176 | Putative HAD family hydrolase; structural genomics | 98.45 | |
| 3mpo_A | 279 | Predicted hydrolase of the HAD superfamily; SGX, P | 98.4 | |
| 3n1u_A | 191 | Hydrolase, HAD superfamily, subfamily III A; struc | 98.38 | |
| 4dw8_A | 279 | Haloacid dehalogenase-like hydrolase; HAD, putativ | 98.31 | |
| 3pgv_A | 285 | Haloacid dehalogenase-like hydrolase; structural g | 98.3 | |
| 3dao_A | 283 | Putative phosphatse; structural genomics, joint ce | 98.23 | |
| 3e8m_A | 164 | Acylneuraminate cytidylyltransferase; 2-keto-3-deo | 98.21 | |
| 3dnp_A | 290 | Stress response protein YHAX; structural PSI-2, pr | 98.21 | |
| 1svj_A | 156 | Potassium-transporting ATPase B chain; alpha-beta | 98.17 | |
| 4ap9_A | 201 | Phosphoserine phosphatase; hydrolase, haloacid deh | 98.06 | |
| 3m1y_A | 217 | Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, | 98.06 | |
| 2r8e_A | 188 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphata | 98.05 | |
| 2pq0_A | 258 | Hypothetical conserved protein GK1056; hyopthetica | 98.05 | |
| 3fzq_A | 274 | Putative hydrolase; YP_001086940.1, putative haloa | 98.03 | |
| 4eze_A | 317 | Haloacid dehalogenase-like hydrolase; magnesium bi | 98.01 | |
| 1l7m_A | 211 | Phosphoserine phosphatase; rossmann fold, four-hel | 98.0 | |
| 3p96_A | 415 | Phosphoserine phosphatase SERB; ssgcid, structural | 97.99 | |
| 3l7y_A | 304 | Putative uncharacterized protein SMU.1108C; hydrol | 97.98 | |
| 3r4c_A | 268 | Hydrolase, haloacid dehalogenase-like hydrolase; h | 97.93 | |
| 1rku_A | 206 | Homoserine kinase; phosphoserine phosphatase, phos | 97.92 | |
| 3m9l_A | 205 | Hydrolase, haloacid dehalogenase-like family; HAD | 97.91 | |
| 1rkq_A | 282 | Hypothetical protein YIDA; two domain structure wi | 97.91 | |
| 2p9j_A | 162 | Hypothetical protein AQ2171; secsg, riken, PSI, st | 97.91 | |
| 3fvv_A | 232 | Uncharacterized protein; unknown function, structu | 97.86 | |
| 1y8a_A | 332 | Hypothetical protein AF1437; structural genomics, | 97.84 | |
| 4gxt_A | 385 | A conserved functionally unknown protein; structur | 97.84 | |
| 2zos_A | 249 | MPGP, mannosyl-3-phosphoglycerate phosphatase; hal | 97.84 | |
| 4ex6_A | 237 | ALNB; modified rossman fold, phosphatase, magnesiu | 97.76 | |
| 1wr8_A | 231 | Phosphoglycolate phosphatase; alpha / beta core do | 97.74 | |
| 1te2_A | 226 | Putative phosphatase; structural genomics, phospha | 97.72 | |
| 3kd3_A | 219 | Phosphoserine phosphohydrolase-like protein; csgid | 97.65 | |
| 3mc1_A | 226 | Predicted phosphatase, HAD family; PSI2, NYSGXRC, | 97.64 | |
| 2b30_A | 301 | Pvivax hypothetical protein; SGPP, structural geno | 97.63 | |
| 2hsz_A | 243 | Novel predicted phosphatase; structural genomics, | 97.61 | |
| 1nf2_A | 268 | Phosphatase; structural proteomics, HAD NEW fold, | 97.61 | |
| 2pib_A | 216 | Phosphorylated carbohydrates phosphatase TM_1254; | 97.59 | |
| 3e58_A | 214 | Putative beta-phosphoglucomutase; structu genomics | 97.55 | |
| 1u02_A | 239 | Trehalose-6-phosphate phosphatase related protein; | 97.55 | |
| 3d6j_A | 225 | Putative haloacid dehalogenase-like hydrolase; str | 97.54 | |
| 1rlm_A | 271 | Phosphatase; HAD family, rossman fold, hydrolase; | 97.54 | |
| 2wf7_A | 221 | Beta-PGM, beta-phosphoglucomutase; transition stat | 97.52 | |
| 3nas_A | 233 | Beta-PGM, beta-phosphoglucomutase; PSI, structural | 97.49 | |
| 2nyv_A | 222 | Pgpase, PGP, phosphoglycolate phosphatase; structu | 97.47 | |
| 1nnl_A | 225 | L-3-phosphoserine phosphatase; PSP, HPSP, phospho- | 97.45 | |
| 3s6j_A | 233 | Hydrolase, haloacid dehalogenase-like family; stru | 97.44 | |
| 1nrw_A | 288 | Hypothetical protein, haloacid dehalogenase-like h | 97.42 | |
| 2go7_A | 207 | Hydrolase, haloacid dehalogenase-like family; stru | 97.41 | |
| 3um9_A | 230 | Haloacid dehalogenase, type II; haloacid dehalogen | 97.33 | |
| 3zx4_A | 259 | MPGP, mannosyl-3-phosphoglycerate phosphatase; hyd | 97.32 | |
| 3nuq_A | 282 | Protein SSM1, putative nucleotide phosphatase; sup | 97.28 | |
| 2rbk_A | 261 | Putative uncharacterized protein; HAD-like phospha | 97.27 | |
| 3sd7_A | 240 | Putative phosphatase; structural genomics, haloaci | 97.27 | |
| 2fea_A | 236 | 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate | 97.26 | |
| 3umb_A | 233 | Dehalogenase-like hydrolase; 2.20A {Ralstonia sola | 97.26 | |
| 1swv_A | 267 | Phosphonoacetaldehyde hydrolase; HAD enzyme superf | 97.2 | |
| 2om6_A | 235 | Probable phosphoserine phosphatase; rossmann fold, | 97.2 | |
| 1zrn_A | 232 | L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseud | 97.18 | |
| 2no4_A | 240 | (S)-2-haloacid dehalogenase IVA; HAD superfamily, | 97.18 | |
| 2hcf_A | 234 | Hydrolase, haloacid dehalogenase-like family; NP_6 | 97.17 | |
| 2kmv_A | 185 | Copper-transporting ATPase 1; menkes, nucleotide b | 97.15 | |
| 1xvi_A | 275 | MPGP, YEDP, putative mannosyl-3-phosphoglycerate p | 97.14 | |
| 2wm8_A | 187 | MDP-1, magnesium-dependent phosphatase 1; haloacid | 97.12 | |
| 3kzx_A | 231 | HAD-superfamily hydrolase, subfamily IA, variant; | 97.12 | |
| 2fi1_A | 190 | Hydrolase, haloacid dehalogenase-like family; stru | 97.09 | |
| 2qlt_A | 275 | (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, sac | 97.06 | |
| 2i6x_A | 211 | Hydrolase, haloacid dehalogenase-like family; HAD | 97.05 | |
| 3gyg_A | 289 | NTD biosynthesis operon putative hydrolase NTDB; P | 97.03 | |
| 3iru_A | 277 | Phoshonoacetaldehyde hydrolase like protein; phosp | 97.02 | |
| 2hdo_A | 209 | Phosphoglycolate phosphatase; NP_784602.1, structu | 97.01 | |
| 3qnm_A | 240 | Haloacid dehalogenase-like hydrolase; structural g | 97.01 | |
| 3u26_A | 234 | PF00702 domain protein; structural genomics, PSI-b | 96.99 | |
| 3dv9_A | 247 | Beta-phosphoglucomutase; structural genomics, APC6 | 96.93 | |
| 3ddh_A | 234 | Putative haloacid dehalogenase-like family hydrol; | 96.91 | |
| 3cnh_A | 200 | Hydrolase family protein; NP_295428.1, predicted h | 96.84 | |
| 4eek_A | 259 | Beta-phosphoglucomutase-related protein; hydrolase | 96.83 | |
| 3l5k_A | 250 | Protein GS1, haloacid dehalogenase-like hydrolase | 96.8 | |
| 2hoq_A | 241 | Putative HAD-hydrolase PH1655; haloacid dehalogena | 96.79 | |
| 3umc_A | 254 | Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeru | 96.79 | |
| 3qxg_A | 243 | Inorganic pyrophosphatase; hydrolase, magnesium bi | 96.77 | |
| 2w43_A | 201 | Hypothetical 2-haloalkanoic acid dehalogenase; hyd | 96.7 | |
| 3smv_A | 240 | S-(-)-azetidine-2-carboxylate hydrolase; haloacid | 96.68 | |
| 3ed5_A | 238 | YFNB; APC60080, bacillus subtilis subsp. subtilis | 96.65 | |
| 1qq5_A | 253 | Protein (L-2-haloacid dehalogenase); hydrolase; 1. | 96.54 | |
| 2b0c_A | 206 | Putative phosphatase; alpha-D-glucose-1-phosphate, | 96.52 | |
| 3umg_A | 254 | Haloacid dehalogenase; defluorinase, hydrolase; 2. | 96.46 | |
| 3l8h_A | 179 | Putative haloacid dehalogenase-like hydrolase; HAD | 96.45 | |
| 4dcc_A | 229 | Putative haloacid dehalogenase-like hydrolase; mag | 96.44 | |
| 3k1z_A | 263 | Haloacid dehalogenase-like hydrolase domain-conta | 96.37 | |
| 2fdr_A | 229 | Conserved hypothetical protein; SAD, structural ge | 96.3 | |
| 2pke_A | 251 | Haloacid delahogenase-like family hydrolase; NP_63 | 96.29 | |
| 2hi0_A | 240 | Putative phosphoglycolate phosphatase; YP_619066.1 | 96.29 | |
| 2gmw_A | 211 | D,D-heptose 1,7-bisphosphate phosphatase; Zn-bindi | 96.27 | |
| 2pr7_A | 137 | Haloacid dehalogenase/epoxide hydrolase family; NP | 96.22 | |
| 2ah5_A | 210 | COG0546: predicted phosphatases; MCSG, structural | 96.1 | |
| 3f9r_A | 246 | Phosphomannomutase; trypanosome glycobiology struc | 96.06 | |
| 3pdw_A | 266 | Uncharacterized hydrolase YUTF; structural genomic | 96.06 | |
| 3ib6_A | 189 | Uncharacterized protein; structural genomics, unkn | 96.05 | |
| 1s2o_A | 244 | SPP, sucrose-phosphatase; phosphohydrolase, HAD su | 95.52 | |
| 3kbb_A | 216 | Phosphorylated carbohydrates phosphatase TM_1254; | 95.47 | |
| 3qgm_A | 268 | P-nitrophenyl phosphatase (PHO2); structural genom | 95.21 | |
| 2gfh_A | 260 | Haloacid dehalogenase-like hydrolase domain conta; | 95.09 | |
| 3pct_A | 260 | Class C acid phosphatase; hydrolase, outer membran | 94.88 | |
| 2o2x_A | 218 | Hypothetical protein; structural genomics, joint c | 94.85 | |
| 3vay_A | 230 | HAD-superfamily hydrolase; rossmann fold, haloacid | 94.79 | |
| 2fue_A | 262 | PMM 1, PMMH-22, phosphomannomutase 1; enzyme-produ | 94.72 | |
| 1vjr_A | 271 | 4-nitrophenylphosphatase; TM1742, structural genom | 94.6 | |
| 3epr_A | 264 | Hydrolase, haloacid dehalogenase-like family; stru | 94.37 | |
| 3ocu_A | 262 | Lipoprotein E; hydrolase, outer membrane; HET: NMN | 93.9 | |
| 1ltq_A | 301 | Polynucleotide kinase; phosphatase, alpha/beta, P- | 93.79 | |
| 2arf_A | 165 | Wilson disease ATPase; P-type ATPase,ATP7B, copper | 93.48 | |
| 3nvb_A | 387 | Uncharacterized protein; protein FKBH, protein fkb | 93.31 | |
| 2c4n_A | 250 | Protein NAGD; nucleotide phosphatase, HAD superfam | 93.18 | |
| 2zg6_A | 220 | Putative uncharacterized protein ST2620, probable | 93.17 | |
| 2oda_A | 196 | Hypothetical protein pspto_2114; haloacid dehaloge | 92.99 | |
| 1qyi_A | 384 | ZR25, hypothetical protein; structural genomics, P | 92.48 | |
| 2fpr_A | 176 | Histidine biosynthesis bifunctional protein HISB; | 91.56 | |
| 4gib_A | 250 | Beta-phosphoglucomutase; rossmann fold, HAD-like, | 91.46 | |
| 2p11_A | 231 | Hypothetical protein; putative haloacid dehalogena | 91.31 | |
| 2amy_A | 246 | PMM 2, phosphomannomutase 2; HS.459855, HS.313504, | 91.23 | |
| 4as2_A | 327 | Phosphorylcholine phosphatase; hydrolase, HAD supe | 90.97 | |
| 2i33_A | 258 | Acid phosphatase; HAD superfamily, hydrolase; 1.57 | 90.66 | |
| 1yns_A | 261 | E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo | 90.24 | |
| 2x4d_A | 271 | HLHPP, phospholysine phosphohistidine inorganic py | 89.07 | |
| 2b82_A | 211 | APHA, class B acid phosphatase; DDDD acid phosphat | 89.04 | |
| 4g9b_A | 243 | Beta-PGM, beta-phosphoglucomutase; HAD, putative p | 87.54 | |
| 1yv9_A | 264 | Hydrolase, haloacid dehalogenase family; hypotheti | 87.22 | |
| 3i28_A | 555 | Epoxide hydrolase 2; aromatic hydrocarbons catabol | 82.9 | |
| 2oyc_A | 306 | PLP phosphatase, pyridoxal phosphate phosphatase; | 82.74 | |
| 2obb_A | 142 | Hypothetical protein; structural genomics, PSI-2, | 81.13 |
| >2zxe_A Na, K-ATPase alpha subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_A* 3b8e_A* 3kdp_A* 3n2f_A* 3n23_A* 1mo7_A 1mo8_A* 1q3i_A | Back alignment and structure |
|---|
Probab=100.00 E-value=7.9e-103 Score=1019.98 Aligned_cols=866 Identities=19% Similarity=0.228 Sum_probs=632.4
Q ss_pred CChhhhHHhhhhc-CCCCCHHHHHHHHhccCCCccCCCC-CcHHHHHHHHhhhHHHHHHHHHHHH----Hhhh-------
Q 001010 150 YPTKETFGYYLKC-TGHSTEAKIAVATEKWGRNVFEYPQ-PTFQKLMKENCMEPFFVFQVFCVGL----WCLD------- 216 (1191)
Q Consensus 150 ~~~~~~~~~~~~~-~g~ls~~e~~~~~~~yG~N~i~i~~-~s~~~ll~~~~~~pf~vfqi~~v~l----w~l~------- 216 (1191)
.+.++.++.+.++ ..|||++|+++|+++||+|+++.++ +++|.+|++++.+||.++++++.++ |.++
T Consensus 51 ~~~~~~~~~l~t~~~~GLs~~e~~~r~~~~G~N~l~~~~~~~~~~~~~~~~~~~~~~iL~~aa~ls~~~~~~~~~~~~~~ 130 (1028)
T 2zxe_A 51 LSLDELHNKYGTDLTRGLTNARAKEILARDGPNSLTPPPTTPEWIKFCRQLFGGFSILLWIGAILCFLAYGIQAATEDEP 130 (1028)
T ss_dssp SCHHHHHHHHTCCSSSCBCHHHHHHHHHHHCCSCCCCCCCCCHHHHHHTTTTSTHHHHHHHHHHHHHHHHHHHHHSSCCC
T ss_pred CCHHHHHHHhCcCccCCCCHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHhHHHHHHHHHHHHHHHHHHhhccccccc
Confidence 4567778888776 4677899999999999999999875 6999999999999998887765444 4333
Q ss_pred --hHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHhhccCCceEEEEECCEEEEEecCCCCCCcEEEEcCCCCCCCCC
Q 001010 217 --EYWYYSLFTLFMLFMFESTMAKSRLK---TLTEIRRVRVDNQTIMVHRCGKWVKLAGTDLVPGDVVSIGRSSGQTGED 291 (1191)
Q Consensus 217 --~y~~ysl~~l~m~vv~~~~~~~~~~r---~~~~l~~m~~~~~~v~V~R~g~~~~I~s~eLvpGDIV~l~~g~gd~~~~ 291 (1191)
++|++++++++++++......+|+.| ++++|++|. |..++|+|||+|++|+++||+|||+|.|++|
T Consensus 131 ~~~~~~~~~~i~~vv~i~~~~~~~qe~ka~~~~~~L~~l~--~~~a~V~Rdg~~~~I~~~~Lv~GDiV~l~~G------- 201 (1028)
T 2zxe_A 131 ANDNLYLGVVLSTVVIVTGCFSYYQEAKSSRIMDSFKNMV--PQQALVIRDGEKSTINAEFVVAGDLVEVKGG------- 201 (1028)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHTCCCCCHHHHHHTTS--CSEEEEEETTEEEEEEGGGCCTTCEEEEETT-------
T ss_pred ccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhC--CCeeEEEECCEEEEEEHHHCCcCCEEEECCC-------
Confidence 35667766666666555555666554 455565554 6789999999999999999999999999987
Q ss_pred ceeeeeEEEEecc-eeeecccccCCCCceecccccCCCCccccccccCCCeeEeeceEEeecCCCCCCCCCCCCCcEEEE
Q 001010 292 KSVPADMLILGGS-AIVNEAILTGESTPQWKVSIMGRETGEKLSARRDKSHVLFGGTKILQHTPDKTFPLKTPDGGCLAV 370 (1191)
Q Consensus 292 ~~VPaD~iLl~G~-~~VdES~LTGES~Pv~K~~i~~~~~~~~~~~~~~k~~~lfaGT~vlq~~~~~~~~~~~~~g~~~~v 370 (1191)
++|||||+|++|+ |.||||+|||||.|+.|.+.+..+ .. .++.|++|+||.|. +|.+.++
T Consensus 202 d~IPaD~~ll~g~~~~VdeS~LTGES~pv~K~~~~~~~--~~----~~~~n~v~~GT~v~-------------~G~~~~~ 262 (1028)
T 2zxe_A 202 DRIPADLRIISAHGCKVDNSSLTGESEPQTRSPEFSSE--NP----LETRNIAFFSTNCV-------------EGTARGV 262 (1028)
T ss_dssp CBCCSEEEEEEEEEEEEECHHHHSCCSCEECCSSCCCS--ST----TTCSSEECTTCEEE-------------EEEEEEE
T ss_pred CEeeceEEEEeeCcEEEEcCccCCCCcceecccCCCCC--Cc----ccccceEEeCceEE-------------cceEEEE
Confidence 7999999999995 899999999999999998743321 11 25689999999999 7999999
Q ss_pred EEEecccchhhHHHHHhccccccccchhhhHHHHHHHHHHHHHHhhheeeeecccCCCcchhHHHHHHHHhhhhccCCCc
Q 001010 371 VLRTGFETSQGKLMRTILFSTERVTANSWESGLFILFLVVFAVIAAGYVLKKGMEDPTRSKYKLFLSCSLIITSVIPPEL 450 (1191)
Q Consensus 371 V~~TG~~T~~Gkl~r~i~~~~~~~~~~~~~~~~fi~~lli~aii~~~~~~~~~~~~~~~~~~~~~l~~i~iit~~vP~~L 450 (1191)
|++||.+|..|++++.+..++++.++.++....|..+++.++++.+..++..++. .+.++...+..++.+++++|||+|
T Consensus 263 V~~tG~~T~~g~i~~~~~~~~~~~t~lq~~~~~~~~~l~~~~l~~~~~~~~~~~~-~~~~~~~~~~~~i~llv~~iP~~L 341 (1028)
T 2zxe_A 263 VVYTGDRTVMGRIATLASGLEVGRTPIAIEIEHFIHIITGVAVFLGVSFFILSLI-LGYSWLEAVIFLIGIIVANVPEGL 341 (1028)
T ss_dssp EEECGGGSHHHHHHHHHHHSCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-TTCCHHHHHHHHHHHHHHHSCTTH
T ss_pred EEEeccccHHHHHHHhccCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-ccCcHHHHHHHHHHHHHHHcCchH
Confidence 9999999999999999988888888888887777666555554333322211111 123466778888899999999999
Q ss_pred chHHHHHHHHHHHHHHhcCccccCCCcccccCCccEEEecccccccCCceEEEEEeecCCC---c-ccc----ccCCCc-
Q 001010 451 PMELSIAVNTSLIALARRGIFCTEPFRIPFAGKVDMCCFDKTGTLTSDDMEFRGVVGLSNA---E-LED----DMTKVP- 521 (1191)
Q Consensus 451 P~~lslav~~s~~~L~k~~I~~~~p~~i~~~G~vd~icfDKTGTLT~~~l~v~gv~~~~~~---~-~~~----~~~~~~- 521 (1191)
|+++++++..+..+|+|+|++|+++.++|.+|++|++|||||||||+|+|+|.+++..+.. + ... ......
T Consensus 342 p~~vti~l~~~~~~mak~~ilvk~~~avE~Lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 421 (1028)
T 2zxe_A 342 LATVTVCLTLTAKRMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIHEADTTENQSGAAFDKTSA 421 (1028)
T ss_dssp HHHHHHHHHHHHHHHHTTTEEESSTTHHHHHHHCCEEEECCCCCCBCSSCEEEEEEETTEEEECCCCTTCCSCCCCSSCH
T ss_pred HHHHHHHHHHHHHHHhhCCceeccchHhhhhcCceEEeccCCCCCCCCeEEEEEEEECCeeeeccCCCCccccccccCCH
Confidence 9999999999999999999999999999999999999999999999999999998754210 0 000 000011
Q ss_pred --hHHHHHHhhccceEEeCC---------cccCChHHHHHHhcccccccCCCccccCCCCCCcccEEEEecCCCCCCcEE
Q 001010 522 --VRTQEILASCHALVFVDN---------KLVGDPLEKAALKGIDWSYKSDEKAMPKRGGGNAVQIVQRHHFASHLKRMS 590 (1191)
Q Consensus 522 --~~~~~~la~chsl~~~~~---------~~~GdPle~all~~~~~~~~~~~~~~~~~~~~~~~~il~~~~Fss~~krms 590 (1191)
.....+.+.||+.....+ ...|||+|.|++++..+...... +....+++++.+||+|++|||+
T Consensus 422 ~~~~l~~~~alc~~~~~~~~~~~hp~~~~~~~gdp~E~Al~~~a~~~~~~~~------~~~~~~~~~~~~pF~s~rk~ms 495 (1028)
T 2zxe_A 422 TWSALSRIAALCNRAVFQAGQDNVPILKRSVAGDASESALLKCIELCCGSVQ------GMRDRNPKIVEIPFNSTNKYQL 495 (1028)
T ss_dssp HHHHHHHHHHHSCCCEECTTCTTSCGGGSCEESCHHHHHHHHHHHHHHSCHH------HHHHHSCEEEEECCCTTTCEEE
T ss_pred HHHHHHHHHHhcCCCeeecCCCCCccccceeCCCchHHHHHHHHHHhCCCHH------HHHHhCceEEEeccCcccceEE
Confidence 134567889998765421 25799999999998754311100 0013477899999999999999
Q ss_pred EEEEe----CCeEEEEEeCcHHHHHHhccCC-------------hHHHHHHHHHHHHhcCeeeeEEEEeCCCCChhhhhh
Q 001010 591 VVVRV----QEEFFAFVKGAPETIQDRLTDL-------------PSSYIETYKKYTHQGSRVLALAFKSLPDMTVSDARS 653 (1191)
Q Consensus 591 vvv~~----~~~~~~~~KGapE~I~~~~~~~-------------p~~~~~~~~~~a~~G~RVLalA~k~l~~~~~~~~~~ 653 (1191)
++++. ++++++++|||||.|.++|... ++.+.+.+++|+++|+|||++|||++++..+.+...
T Consensus 496 vi~~~~~~~~~~~~~~~KGA~e~il~~c~~~~~~g~~~~l~~~~~~~~~~~~~~~a~~G~RvL~~A~~~l~~~~~~~~~~ 575 (1028)
T 2zxe_A 496 SIHENEKSSESRYLLVMKGAPERILDRCSTILLNGAEEPLKEDMKEAFQNAYLELGGLGERVLGFCHFALPEDKYNEGYP 575 (1028)
T ss_dssp EEEECSCTTTCCEEEEEEECHHHHHTTEEEECBTTBCCBCCHHHHHHHHHHHHHHHHTTCEEEEEEEEECCSTTSCTTCC
T ss_pred EEEeccCCCCCcEEEEEeCCcHHHHHHhhhhhcCCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEEEEecCccccccccc
Confidence 99986 3567899999999999999531 346778889999999999999999997533222111
Q ss_pred cc---ccccccCeEEeeeecccCcCCchhHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCcEEEeecCCCcee
Q 001010 654 LH---RDEVENGLTFAGFAVFNCPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLILCPVKNGKVY 730 (1191)
Q Consensus 654 ~~---r~~~E~dL~flG~l~~~d~lK~da~~~I~~L~~agi~vvMiTGDn~~TA~~VA~~~gI~~~~~~il~~~~~~~~~ 730 (1191)
.. .+..|+|++|+|+++++||+|||++++|++|+++||+++|+||||+.||.++|++|||...+...+.+
T Consensus 576 ~~~~~~~~~e~~l~~lG~i~i~Dplr~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lgi~~~~~~~i~~------- 648 (1028)
T 2zxe_A 576 FDADEPNFPTTDLCFVGLMAMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKGVGIISEGNETIED------- 648 (1028)
T ss_dssp CCTTTTCSCCSSEEEEEEEEEECCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTSSCTTCCCHHH-------
T ss_pred cchhhhhhhhcCeEEEeeeccCCCCChhHHHHHHHHHHcCCEEEEECCCCHHHHHHHHHHcCCCCCCchhHHH-------
Confidence 12 23458999999999999999999999999999999999999999999999999999997422100000
Q ss_pred eecCCCccccccCChHHHhcccccceEEEechhhhhhcchHHHHhhcCcc--eEEeecChhhHHHHHHHHhHcCCEEEEE
Q 001010 731 EWVSPDETEKIQYSEKEVEGLTDAHDLCIGGDCFEMLQQTSAVLRVIPYV--KVFARVAPEQKELILTTFKAVGRMTLMC 808 (1191)
Q Consensus 731 ~w~~~d~~~~~~~~~~~~~~~~~~~~l~itG~~l~~l~~~~~~~~~l~~~--~VfAR~sP~qK~~iV~~Lq~~g~~V~m~ 808 (1191)
..+ ....+.... .....+..+++|+.++.+.+ +++.+++.++ .||||++|+||..+|+.+|+.|+.|+||
T Consensus 649 ----~~~--~~~~~~~~~-~~~~~~~~vi~G~~l~~~~~-~~l~~~~~~~~~~v~ar~~P~~K~~iV~~lq~~g~~V~~i 720 (1028)
T 2zxe_A 649 ----IAA--RLNIPIGQV-NPRDAKACVVHGSDLKDLST-EVLDDILHYHTEIVFARTSPQQKLIIVEGCQRQGAIVAVT 720 (1028)
T ss_dssp ----HHH--HTTCCGGGS-CGGGCCEEEEEHHHHTTCCH-HHHHHHHHHCSEEEEESCCHHHHHHHHHHHHHTTCCEEEE
T ss_pred ----HHh--hcCcchhhc-cccccceEEEEcHHhhhCCH-HHHHHHHhhCCcEEEEEcCHHHHHHHHHHHHhCCCEEEEE
Confidence 000 000000000 01123468899999887654 4566666555 4999999999999999999999999999
Q ss_pred cCCccCHHHHhhCCceEEeccCCCccccccCCcccccccchhhhhccccccchhhhhhhhccCCCCCCccchhhhhhhcc
Q 001010 809 GDGTNDVGALKQAHVGVALLNAVPPTQSGNSSSEASKDENTKSVKSKKSKSASEAASKAMSLNSEGTSKGKASARLEANS 888 (1191)
Q Consensus 809 GDG~ND~~ALk~AdVGIAl~~~~~e~~~~asdi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 888 (1191)
|||.||+||||+|||||||+.++++++++++|+++.++
T Consensus 721 GDG~ND~paLk~AdvGIAmg~~gtd~ak~aAD~Vl~~~------------------------------------------ 758 (1028)
T 2zxe_A 721 GDGVNDSPALKKADIGVAMGISGSDVSKQAADMILLDD------------------------------------------ 758 (1028)
T ss_dssp ECSGGGHHHHHHSSEEEEESSSCCHHHHHHCSEEETTC------------------------------------------
T ss_pred cCCcchHHHHHhCCceEEeCCccCHHHHHhcCEEecCC------------------------------------------
Confidence 99999999999999999999666777777777776544
Q ss_pred cccccccchHHHHHHHHHHHHHHHHhhcCCCCCCCccccCcccccCCCccCcCCccchhhhhhccchHHHHHHhhhHHHH
Q 001010 889 RTAGNRHLTAAEMQREKLKKMMEELNEEGDGRSAPIVKLGDASMASPFTAKHASVAPTTDIIRQGRSTLVTTLQMFKILG 968 (1191)
Q Consensus 889 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~klgdASiaaPFtsk~~~i~~v~~iir~GR~~Lvtt~~~fk~l~ 968 (1191)
+.+++.++|++||++..+..+...|..
T Consensus 759 -----------------------------------------------------~~~~I~~~i~~gR~i~~ni~k~i~~~l 785 (1028)
T 2zxe_A 759 -----------------------------------------------------NFASIVTGVEEGRLIFDNLKKSIAYTL 785 (1028)
T ss_dssp -----------------------------------------------------CTHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred -----------------------------------------------------CHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 456788899999999887777666643
Q ss_pred HHHHHHHHH--HHHhhhccccccchHHHHHhHHHH-HHHHHhhccCCCCccccCCCCC----CccchhhHHHHHHHH-HH
Q 001010 969 LNCLATAYV--LSVMYLDGVKLGDVQATISGVFTA-AFFLFISHARPLPTLSAARPHP----NIFCSYVFLSLMGQF-AI 1040 (1191)
Q Consensus 969 l~~li~~~s--~svly~~g~~~~d~Q~~~~~~l~~-~~~~~~s~~~p~~~Ls~~rP~~----~if~~~~~~si~~Q~-~i 1040 (1191)
...+..... ..+++.....++..|+++.++++. ++.++++..+|.+.+.+++|.. ++|+..++..+++|. ++
T Consensus 786 ~~n~~~~~~~~~~~~~~~~~~l~~~qil~inl~~d~~pa~al~~e~~~~~~m~~~Pr~~~~~~l~~~~~~~~~~~~~g~~ 865 (1028)
T 2zxe_A 786 TSNIPEITPFLVFIIGNVPLPLGTVTILCIDLGTDMVPAISLAYEQAESDIMKRQPRNPKTDKLVNERLISMAYGQIGMI 865 (1028)
T ss_dssp HTTHHHHHHHHHHHHHCCCCSSCHHHHHHHHTTTTHHHHHHGGGCCCSSCGGGSCCCCTTTCCSSCHHHHHHHTTTHHHH
T ss_pred HHHHHHHHHHHHHHHHcccchhHHHHHHHHHHHHHHHHHHHhccCccchhhhccCCCCcccccccCHHHHHHHHHHHHHH
Confidence 332222222 223444456789999999999886 4788999999988888777753 899999887755443 34
Q ss_pred HHHHHHHHhhhh---cc------------cCCCCCCCCCCCCCC-----------cccchhhhHHHHHHHHhhhee-Eec
Q 001010 1041 HLFFLISSVKEA---EK------------YMPDECIEPDADFHP-----------NLVNTVSYMVNMMIQVATFAV-NYM 1093 (1191)
Q Consensus 1041 ~~~~l~~~~~~~---~~------------~~~~~~~~~~~~f~p-----------~~~nt~vfl~~~~~~i~~~~v-~~~ 1093 (1191)
|.++.++.+.+. .. |......+.+..+.. ....|+.|....+.|+..... -..
T Consensus 866 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~T~~f~~~v~~q~~~~~~~r~~ 945 (1028)
T 2zxe_A 866 QALGGFFSYFVILAENGFLPMDLIGKRVRWDDRWISDVEDSFGQQWTYEQRKIVEFTCHTSFFISIVVVQWADLIICKTR 945 (1028)
T ss_dssp HHHHHHHHHHHHHHHTTCCHHHHTTCHHHHSCTTCCCEECTTSCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCS
T ss_pred HHHHHHHHHHHHHhccCcccchhhcccchhccccccccccccccccchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHccC
Confidence 433322221111 01 110000000000111 134688888888888754332 233
Q ss_pred CC-CcccccccchhHHHHHHHHHHHHHHhhcccchhhhhccceeeCChhHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 001010 1094 GH-PFNQSISENKPFMYALMGAVGFFTVITSDLLRSLNDWLKLVPLPSGLRDKLLIWAGLMFLGCYSWERFLRWA 1167 (1191)
Q Consensus 1094 g~-Pf~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~lv~~p~~~~~~l~~~~~~~~~~~~~~e~~~~~~ 1167 (1191)
.. .|+.+ +.|++|++++++..++.++++ .+|.++.+|+++|+|..++...+.+. +..++++.+.|++
T Consensus 946 ~~~~~~~~-~~n~~l~~~~~~~~~l~~~~~--~~p~~~~~f~~~~l~~~~w~~~~~~~----~~~~~~~e~~k~~ 1013 (1028)
T 2zxe_A 946 RNSIFQQG-MKNKILIFGLFEETALAAFLS--YCPGTDVALRMYPLKPSWWFCAFPYS----LIIFLYDEMRRFI 1013 (1028)
T ss_dssp SSCHHHHC-SCCHHHHHHHHHHHHHHHHHH--HSTTHHHHTCCCCCCGGGGGTTHHHH----HHHHHHHHHHHHH
T ss_pred CcchhccC-CcCHHHHHHHHHHHHHHHHHH--HhhhHHhhhcCCCCCHHHHHHHHHHH----HHHHHHHHHHHHH
Confidence 33 36666 899999988888777766553 46788999999999875544333222 2345555555443
|
| >3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2yn9_A 2xzb_A 1iwc_A 1iwf_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-100 Score=1000.42 Aligned_cols=869 Identities=18% Similarity=0.197 Sum_probs=634.4
Q ss_pred CChhhhHHhhhhcC-CCCCHHHHHHHHhccCCCccCCCC-CcHHHHHHHHhhhHHHHHHHHHHHHHhh-h----------
Q 001010 150 YPTKETFGYYLKCT-GHSTEAKIAVATEKWGRNVFEYPQ-PTFQKLMKENCMEPFFVFQVFCVGLWCL-D---------- 216 (1191)
Q Consensus 150 ~~~~~~~~~~~~~~-g~ls~~e~~~~~~~yG~N~i~i~~-~s~~~ll~~~~~~pf~vfqi~~v~lw~l-~---------- 216 (1191)
.+.++.++.+.++. .|||++|+++|+++||+|+++.++ +++|.+|++++.+||.++++++.++.++ .
T Consensus 56 ~~~~~~~~~l~~~~~~GLs~~ea~~rl~~~G~N~l~~~~~~~~~~~~~~q~~~~~~~il~~aa~~~~~~~~~~~~~~~~~ 135 (1034)
T 3ixz_A 56 LSVAELEQKYQTSATKGLSASLAAELLLRDGPNALRPPRGTPEYVKFARQLAGGLQCLMWVAAAICLIAFAIQASEGDLT 135 (1034)
T ss_pred CCHHHHHHHhCCCcccCCCHHHHHHHHHhhCCCCCCCCCCCCHHHHHHHHHhChHHHHHHHHHHHHHHHHHHhhccCCCc
Confidence 34677888888774 678999999999999999998776 5999999999999998777665544322 1
Q ss_pred --hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc-CCceEEEEECCEEEEEecCCCCCCcEEEEcCCCCCCCCCce
Q 001010 217 --EYWYYSLFTLFMLFMFESTMAKSRLKTLTEIRRVRV-DNQTIMVHRCGKWVKLAGTDLVPGDVVSIGRSSGQTGEDKS 293 (1191)
Q Consensus 217 --~y~~ysl~~l~m~vv~~~~~~~~~~r~~~~l~~m~~-~~~~v~V~R~g~~~~I~s~eLvpGDIV~l~~g~gd~~~~~~ 293 (1191)
++|++++++++++++......+|..|+.+.++++.. .+..++|+|||++++|+++||||||||.|++| ++
T Consensus 136 ~~~~~~~~~~i~~vv~i~~~~~~~qe~ka~~al~~L~~l~~~~a~ViRdG~~~~I~~~eLv~GDiV~l~~G-------d~ 208 (1034)
T 3ixz_A 136 TDDNLYLALALIAVVVVTGCFGYYQEFKSTNIIASFKNLVPQQATVIRDGDKFQINADQLVVGDLVEMKGG-------DR 208 (1034)
T ss_pred cccchhhhhhhheeeeHHHHHHHHHHHHHHHHHHHHhccCCCeeEEEECCEEEEEEHHHCCCCcEEEEcCC-------ce
Confidence 346667666666666655666676666665555543 46789999999999999999999999999987 79
Q ss_pred eeeeEEEEecc-eeeecccccCCCCceecccccCCCCccccccccCCCeeEeeceEEeecCCCCCCCCCCCCCcEEEEEE
Q 001010 294 VPADMLILGGS-AIVNEAILTGESTPQWKVSIMGRETGEKLSARRDKSHVLFGGTKILQHTPDKTFPLKTPDGGCLAVVL 372 (1191)
Q Consensus 294 VPaD~iLl~G~-~~VdES~LTGES~Pv~K~~i~~~~~~~~~~~~~~k~~~lfaGT~vlq~~~~~~~~~~~~~g~~~~vV~ 372 (1191)
|||||+|++|+ +.||||+|||||.|+.|.+.... +.. .+++|++|+||.|+ +|.+.++|+
T Consensus 209 VPAD~~ll~~~~l~VdES~LTGES~pv~K~~~~~~--~~~----~~~~n~~f~GT~v~-------------~G~~~~vVv 269 (1034)
T 3ixz_A 209 VPADIRILQAQGRKVDNSSLTGESEPQTRSPECTH--ESP----LETRNIAFFSTMCL-------------EGTAQGLVV 269 (1034)
T ss_pred ecCCeEEEEeCCceEEecccCCCCCCeeccCCCcc--ccc----cccccceecceeEE-------------eecceEEEE
Confidence 99999999985 79999999999999999874321 111 14689999999999 799999999
Q ss_pred EecccchhhHHHHHhccccccccchhhhHHHHHHHHHHHHHHhhheeeeecccCCCcchhHHHHHHHHhhhhccCCCcch
Q 001010 373 RTGFETSQGKLMRTILFSTERVTANSWESGLFILFLVVFAVIAAGYVLKKGMEDPTRSKYKLFLSCSLIITSVIPPELPM 452 (1191)
Q Consensus 373 ~TG~~T~~Gkl~r~i~~~~~~~~~~~~~~~~fi~~lli~aii~~~~~~~~~~~~~~~~~~~~~l~~i~iit~~vP~~LP~ 452 (1191)
+||.+|..|++.+.+...++..++.++....|...+..++++.+..++..++. .+.++...++.++.+++++||++||+
T Consensus 270 ~tG~~T~~GkI~~~~~~~~~~~tpl~~~~~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~i~l~v~~iPe~Lp~ 348 (1034)
T 3ixz_A 270 NTGDRTIIGRIASLASGVENEKTPIAIEIEHFVDIIAGLAILFGATFFIVAMC-IGYTFLRAMVFFMAIVVAYVPEGLLA 348 (1034)
T ss_pred eehhhhHhhHHHHhhcccccCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hcchHHHHHHHHHHHHHheeccccHH
Confidence 99999999999999888777788888777777655554444332222211111 12356778889999999999999999
Q ss_pred HHHHHHHHHHHHHHhcCccccCCCcccccCCccEEEecccccccCCceEEEEEeecCCC-ccc--cc-----cCCC---c
Q 001010 453 ELSIAVNTSLIALARRGIFCTEPFRIPFAGKVDMCCFDKTGTLTSDDMEFRGVVGLSNA-ELE--DD-----MTKV---P 521 (1191)
Q Consensus 453 ~lslav~~s~~~L~k~~I~~~~p~~i~~~G~vd~icfDKTGTLT~~~l~v~gv~~~~~~-~~~--~~-----~~~~---~ 521 (1191)
+++++++.+..+|+|+|++|+++.++|.+|++|++|||||||||+|+|+|.+++..+.. ... .+ .... .
T Consensus 349 ~vti~la~~~~rmak~~~lvr~l~avE~LG~v~~IcsDKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 428 (1034)
T 3ixz_A 349 TVTVCLSLTAKRLASKNCVVKNLEAVETLGSTSVICSDKTGTLTQNRMTVSHLWFDNHIHSADTTEDQSGQTFDQSSETW 428 (1034)
T ss_pred HHHHHHHHHHHHHhhCCeEecChHHHHhhcCCcEEEcCCCCCcccCeEEEEEEEECCccccccCcccccccccCcCCHHH
Confidence 99999999999999999999999999999999999999999999999999998754320 000 00 0000 1
Q ss_pred hHHHHHHhhccceEEeCC---------cccCChHHHHHHhcccccccCCCccccCCCCCCcccEEEEecCCCCCCcEEEE
Q 001010 522 VRTQEILASCHALVFVDN---------KLVGDPLEKAALKGIDWSYKSDEKAMPKRGGGNAVQIVQRHHFASHLKRMSVV 592 (1191)
Q Consensus 522 ~~~~~~la~chsl~~~~~---------~~~GdPle~all~~~~~~~~~~~~~~~~~~~~~~~~il~~~~Fss~~krmsvv 592 (1191)
.....+++.||+.....+ ...|||.|.|++++..+...... +....+++++.+||+|++|||+++
T Consensus 429 ~~l~~~~~lc~~a~~~~~~~~~~~~~~~~~gdp~e~All~~~~~~~~~~~------~~~~~~~~~~~~pF~s~rk~m~~v 502 (1034)
T 3ixz_A 429 RALCRVLTLCNRAAFKSGQDAVPVPKRIVIGDASETALLKFSELTLGNAM------GYRERFPKVCEIPFNSTNKFQLSI 502 (1034)
T ss_pred HHHHHHHHHhccceeccCcCCCcccCceeccCchHHHHHHHHHHhCCChH------HHHHhCcceEEeeecCCCceEEEE
Confidence 234567889998765422 35799999999998765322111 112457789999999999999988
Q ss_pred EEeC----CeEEEEEeCcHHHHHHhccCC-------------hHHHHHHHHHHHHhcCeeeeEEEEeCCCCChhhhhhcc
Q 001010 593 VRVQ----EEFFAFVKGAPETIQDRLTDL-------------PSSYIETYKKYTHQGSRVLALAFKSLPDMTVSDARSLH 655 (1191)
Q Consensus 593 v~~~----~~~~~~~KGapE~I~~~~~~~-------------p~~~~~~~~~~a~~G~RVLalA~k~l~~~~~~~~~~~~ 655 (1191)
+... +++++++|||||.|.++|... .+.+.+.+++|+++|+||||+|||.++..+..+.....
T Consensus 503 ~~~~~~~~~~~~l~~KGApe~il~~c~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~G~RvLa~A~~~l~~~~~~~~~~~~ 582 (1034)
T 3ixz_A 503 HTLEDPRDPRHVLVMKGAPERVLERCSSILIKGQELPLDEQWREAFQTAYLSLGGLGERVLGFCQLYLSEKDYPPGYAFD 582 (1034)
T ss_pred EEecCCCCccEEEEEeCChHHHHHHhHHhhcCCceecCCHHHHHHHHHHHHHHHhcCcHhheEeEEecChhhcccccccc
Confidence 8753 468899999999999999531 34577788999999999999999999754332222222
Q ss_pred ---ccccccCeEEeeeecccCcCCchhHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCcEEEeecCCCceeee
Q 001010 656 ---RDEVENGLTFAGFAVFNCPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLILCPVKNGKVYEW 732 (1191)
Q Consensus 656 ---r~~~E~dL~flG~l~~~d~lK~da~~~I~~L~~agi~vvMiTGDn~~TA~~VA~~~gI~~~~~~il~~~~~~~~~~w 732 (1191)
.+..|+||+|+|+++++||+|++++++|++|+++||+++|+|||++.||.++|+++||...+...+.+
T Consensus 583 ~~~~~~~e~~l~~lGlv~i~Dp~r~~~~~aI~~l~~aGI~vvmiTGd~~~tA~~ia~~lgi~~~~~~~i~~--------- 653 (1034)
T 3ixz_A 583 VEAMNFPTSGLSFAGLVSMIDPPRATVPDAVLKCRTAGIRVIMVTGDHPITAKAIAASVGIISEGSETVED--------- 653 (1034)
T ss_pred hhhhhccccCcEEEEEEeccCCCchhHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCCCCCCchHHHH---------
Confidence 23468999999999999999999999999999999999999999999999999999997432110000
Q ss_pred cCCCccccccCChHHHhcccccceEEEechhhhhhcchHHHHhhcCcc--eEEeecChhhHHHHHHHHhHcCCEEEEEcC
Q 001010 733 VSPDETEKIQYSEKEVEGLTDAHDLCIGGDCFEMLQQTSAVLRVIPYV--KVFARVAPEQKELILTTFKAVGRMTLMCGD 810 (1191)
Q Consensus 733 ~~~d~~~~~~~~~~~~~~~~~~~~l~itG~~l~~l~~~~~~~~~l~~~--~VfAR~sP~qK~~iV~~Lq~~g~~V~m~GD 810 (1191)
..+....+. .. ......+..+++|..+..+.+ +++.+.+.+. .||||++|+||.++|+.+|+.|+.|+|+||
T Consensus 654 --~~~~~~~~~--~~-~~~~~~~~~~~~g~~l~~~~~-~~l~~~~~~~~~~v~ar~~P~~K~~iv~~lq~~g~~V~a~GD 727 (1034)
T 3ixz_A 654 --IAARLRVPV--DQ-VNRKDARACVINGMQLKDMDP-SELVEALRTHPEMVFARTSPQQKLVIVESCQRLGAIVAVTGD 727 (1034)
T ss_pred --HHHhhCccc--hh-ccccccceeEEecHhhhhCCH-HHHHHHHHhCCceEEEecCHHHHHHHHHHHHHcCCEEEEECC
Confidence 000000000 00 011123467889998887654 3455555543 599999999999999999999999999999
Q ss_pred CccCHHHHhhCCceEEeccCCCccccccCCcccccccchhhhhccccccchhhhhhhhccCCCCCCccchhhhhhhcccc
Q 001010 811 GTNDVGALKQAHVGVALLNAVPPTQSGNSSSEASKDENTKSVKSKKSKSASEAASKAMSLNSEGTSKGKASARLEANSRT 890 (1191)
Q Consensus 811 G~ND~~ALk~AdVGIAl~~~~~e~~~~asdi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 890 (1191)
|.||++|||+||+||||+.++++++++++|+++.++
T Consensus 728 G~ND~~mLk~A~vGIAMg~ng~d~aK~aAD~Vl~~~-------------------------------------------- 763 (1034)
T 3ixz_A 728 GVNDSPALKKADIGVAMGIAGSDAAKNAADMILLDD-------------------------------------------- 763 (1034)
T ss_pred cHHhHHHHHHCCeeEEeCCccCHHHHHhcCEEeccC--------------------------------------------
Confidence 999999999999999999777777888888887555
Q ss_pred cccccchHHHHHHHHHHHHHHHHhhcCCCCCCCccccCcccccCCCccCcCCccchhhhhhccchHHHHHHhhhHHHHHH
Q 001010 891 AGNRHLTAAEMQREKLKKMMEELNEEGDGRSAPIVKLGDASMASPFTAKHASVAPTTDIIRQGRSTLVTTLQMFKILGLN 970 (1191)
Q Consensus 891 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~klgdASiaaPFtsk~~~i~~v~~iir~GR~~Lvtt~~~fk~l~l~ 970 (1191)
+...+.+.|++||+.+.+.-+...|..-.
T Consensus 764 ---------------------------------------------------~~~gI~~ai~~GR~i~~ni~k~i~~~l~~ 792 (1034)
T 3ixz_A 764 ---------------------------------------------------NFASIVTGVEQGRLIFDNLKKSIAYTLTK 792 (1034)
T ss_pred ---------------------------------------------------CchHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33467789999999998888777775443
Q ss_pred HHHHHHH--HHHhhhccccccchHHHHHhHHHH-HHHHHhhccCCCCccccCCCC----CCccchhhHHHHHHHHHHHHH
Q 001010 971 CLATAYV--LSVMYLDGVKLGDVQATISGVFTA-AFFLFISHARPLPTLSAARPH----PNIFCSYVFLSLMGQFAIHLF 1043 (1191)
Q Consensus 971 ~li~~~s--~svly~~g~~~~d~Q~~~~~~l~~-~~~~~~s~~~p~~~Ls~~rP~----~~if~~~~~~si~~Q~~i~~~ 1043 (1191)
++..... +.+++.....++..|+++.++++. ++.++++..+|-+.+-+++|. .+|++..++..+++|..+-.+
T Consensus 793 ni~~~~~~~~~~~~~~~~pl~~~qiL~inl~~d~~palal~~e~~~~~~m~~~Pr~~~~~~l~~~~~~~~~~~~~g~~~~ 872 (1034)
T 3ixz_A 793 NIPELTPYLIYITVSVPLPLGCITILFIELCTDIFPSVSLAYEKAESDIMHLRPRNPKRDRLVNEPLAAYSYFQIGAIQS 872 (1034)
T ss_pred HHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCChhhhhCCCCCCccccccCHHHHHHHHHHHHHHHH
Confidence 3322221 222333345689999999999986 479999999999999888775 349999888777666433221
Q ss_pred H-H--HHHhhh-hcccCCCCC------------CCCCC-----------CCCCcccchhhhHHHHHHHHh-hheeEe-cC
Q 001010 1044 F-L--ISSVKE-AEKYMPDEC------------IEPDA-----------DFHPNLVNTVSYMVNMMIQVA-TFAVNY-MG 1094 (1191)
Q Consensus 1044 ~-l--~~~~~~-~~~~~~~~~------------~~~~~-----------~f~p~~~nt~vfl~~~~~~i~-~~~v~~-~g 1094 (1191)
. . .|.+.. ...+.|... .+.+. .+....-.|+.|....+.|+. .|.+-+ ..
T Consensus 873 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~lv~~q~~~~~~~r~~~~ 952 (1034)
T 3ixz_A 873 FAGFTDYFTAMAQEGWFPLLCVGLRPQWENHHLQDLQDSYGQEWTFGQRLYQQYTCYTVFFISIEMCQIADVLIRKTRRL 952 (1034)
T ss_pred HHHHHHHHHHHhhcCCccccccccccccccccccccccccccccchhhhhhhhhhHHHHHHHHHHHHHHHHHHhhccCCC
Confidence 1 1 111111 111111100 00000 000111346677776666664 333333 24
Q ss_pred CCcccccccchhHHHHHHHHHHHHHHhhcccchhhhhccceeeCChhHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 001010 1095 HPFNQSISENKPFMYALMGAVGFFTVITSDLLRSLNDWLKLVPLPSGLRDKLLIWAGLMFLGCYSWERFLRWA 1167 (1191)
Q Consensus 1095 ~Pf~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~lv~~p~~~~~~l~~~~~~~~~~~~~~e~~~~~~ 1167 (1191)
..|+.+++.|+++++++++..++.+++ -++|.++..|+.+|++..++...+.+.+ +.++++.+.|++
T Consensus 953 s~~~~~~~~N~~l~~~~~~~~~l~~~~--~~~p~~~~~f~~~~l~~~~w~~~~~~~~----~~~~~~e~~K~~ 1019 (1034)
T 3ixz_A 953 SAFQQGFFRNRILVIAIVFQVCIGCFL--CYCPGMPNIFNFMPIRFQWWLVPMPFGL----LIFVYDEIRKLG 1019 (1034)
T ss_pred cccccCCcccHHHHHHHHHHHHHHHHH--HHhhhHHHHhcCCCCCHHHHHHHHHHHH----HHHHHHHHHHHH
Confidence 578889999999999888877776655 3578899999999998654333333322 234455554444
|
| >3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-99 Score=986.59 Aligned_cols=838 Identities=21% Similarity=0.242 Sum_probs=613.9
Q ss_pred CChhhhHHhhhhc-CCCCCHHHHHHHHhccCCCccCCCC-CcHHHHHHHHhhhHHHHHHHHHHHH----Hhhh---h---
Q 001010 150 YPTKETFGYYLKC-TGHSTEAKIAVATEKWGRNVFEYPQ-PTFQKLMKENCMEPFFVFQVFCVGL----WCLD---E--- 217 (1191)
Q Consensus 150 ~~~~~~~~~~~~~-~g~ls~~e~~~~~~~yG~N~i~i~~-~s~~~ll~~~~~~pf~vfqi~~v~l----w~l~---~--- 217 (1191)
.+.++.++.+.++ ..|||++|+++|+++||+|+++.++ +++|++|++++.+|++++++++.++ |+.+ +
T Consensus 8 ~~~~~~~~~l~~~~~~GLs~~e~~~r~~~~G~N~l~~~~~~~~~~~~~~qf~~~~~~~l~~~a~~s~~~~~~~~~~~~~~ 87 (995)
T 3ar4_A 8 KSTEECLAYFGVSETTGLTPDQVKRHLEKYGHNELPAEEGKSLWELVIEQFEDLLVRILLLAACISFVLAWFEEGEETIT 87 (995)
T ss_dssp SCHHHHHHHHTCCTTTCBCHHHHHHHHHHHCCSSCCCCCCCCHHHHHHGGGCSHHHHHHHHHHHHHHHHTTSCCSSGGGS
T ss_pred CCHHHHHHHhCCCcccCCCHHHHHHHHHhcCCCccCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccchh
Confidence 3467788888875 3578999999999999999999875 5999999999999998766555443 3332 1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHhhccCCceEEEEECCE--EEEEecCCCCCCcEEEEcCCCCCCCCCc
Q 001010 218 YWYYSLFTLFMLFMFESTMAKSRLKT---LTEIRRVRVDNQTIMVHRCGK--WVKLAGTDLVPGDVVSIGRSSGQTGEDK 292 (1191)
Q Consensus 218 y~~ysl~~l~m~vv~~~~~~~~~~r~---~~~l~~m~~~~~~v~V~R~g~--~~~I~s~eLvpGDIV~l~~g~gd~~~~~ 292 (1191)
.|+.++++++++++......+|+.|+ +++|+++ .+..++|+|||+ +++|+++||+|||+|.|++| +
T Consensus 88 ~~~~~~~i~~~~~~~~~i~~~qe~~a~~al~~L~~~--~~~~a~V~R~g~~~~~~I~~~~lv~GDiV~l~~G-------d 158 (995)
T 3ar4_A 88 AFVEPFVILLILIANAIVGVWQERNAENAIEALKEY--EPEMGKVYRADRKSVQRIKARDIVPGDIVEVAVG-------D 158 (995)
T ss_dssp SSHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHGGG--SCSEEEEEBTTCSSCEEEEGGGCCTTCEEEEETT-------C
T ss_pred hHHHhHHhhHHHHHHHHHHHHHHHHHHHHHHHHHcc--CCCeEEEEeCCCceEEEEEHHHCCCCCEEEECCC-------C
Confidence 35556666665555555556666554 4555555 467899999887 69999999999999999987 7
Q ss_pred eeeeeEEEEe---cceeeecccccCCCCceecccccCCCCccccccccCCCeeEeeceEEeecCCCCCCCCCCCCCcEEE
Q 001010 293 SVPADMLILG---GSAIVNEAILTGESTPQWKVSIMGRETGEKLSARRDKSHVLFGGTKILQHTPDKTFPLKTPDGGCLA 369 (1191)
Q Consensus 293 ~VPaD~iLl~---G~~~VdES~LTGES~Pv~K~~i~~~~~~~~~~~~~~k~~~lfaGT~vlq~~~~~~~~~~~~~g~~~~ 369 (1191)
+|||||+|++ |+|.||||+|||||.|+.|.+.+..+.+. ...+++|.+|+||.|. +|.+.+
T Consensus 159 ~IPaD~~ll~~~s~~l~VdeS~LTGES~pv~K~~~~~~~~~~---~~~~~~~~v~~GT~v~-------------~G~~~~ 222 (995)
T 3ar4_A 159 KVPADIRILSIKSTTLRVDQSILTGESVSVIKHTEPVPDPRA---VNQDKKNMLFSGTNIA-------------AGKALG 222 (995)
T ss_dssp BCCSEEEEEEECSSCEEEECHHHHCCCSCEEECCSCCCCTTC---CGGGCTTEECTTCEEE-------------ECEEEE
T ss_pred cccccEEEEEEeeceEEEEcccccCCCcceeccccccCCccc---CcccccceEecCCEEE-------------cceEEE
Confidence 9999999975 46899999999999999998754322111 1236789999999999 799999
Q ss_pred EEEEecccchhhHHHHHhccccccccchhhhHHHHH----HHHHHHHHHhhheeeeecccCC--Ccch----hHHHHHHH
Q 001010 370 VVLRTGFETSQGKLMRTILFSTERVTANSWESGLFI----LFLVVFAVIAAGYVLKKGMEDP--TRSK----YKLFLSCS 439 (1191)
Q Consensus 370 vV~~TG~~T~~Gkl~r~i~~~~~~~~~~~~~~~~fi----~~lli~aii~~~~~~~~~~~~~--~~~~----~~~~l~~i 439 (1191)
+|++||.+|..|++++.+...+.+.++.++....|. .++++++++.+.+++.. +.++ +.++ ...+..++
T Consensus 223 ~V~~tG~~T~~g~i~~~~~~~~~~~tplq~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ai 301 (995)
T 3ar4_A 223 IVATTGVSTEIGKIRDQMAATEQDKTPLQQKLDEFGEQLSKVISLICVAVWLINIGH-FNDPVHGGSWIRGAIYYFKIAV 301 (995)
T ss_dssp EEEECGGGSHHHHHHHHHHTCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTGGG-GGSCSSSSCHHHHHHHHHHHHH
T ss_pred EEEEcCcchHHHHHHHHhhcCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hccccccchHHHHHHHHHHHHH
Confidence 999999999999999999887777777666554443 33333333322221110 1111 1112 22455778
Q ss_pred HhhhhccCCCcchHHHHHHHHHHHHHHhcCccccCCCcccccCCccEEEecccccccCCceEEEEEeecCC---------
Q 001010 440 LIITSVIPPELPMELSIAVNTSLIALARRGIFCTEPFRIPFAGKVDMCCFDKTGTLTSDDMEFRGVVGLSN--------- 510 (1191)
Q Consensus 440 ~iit~~vP~~LP~~lslav~~s~~~L~k~~I~~~~p~~i~~~G~vd~icfDKTGTLT~~~l~v~gv~~~~~--------- 510 (1191)
.+++++|||+||+++++++..+..+|+|+|++|+++.++|.+|++|++|||||||||+|+|+|.+++..++
T Consensus 302 ~l~v~aiP~~Lp~~vt~~la~~~~~ma~~~~lvr~~~~iE~Lg~v~~ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~ 381 (995)
T 3ar4_A 302 ALAVAAIPEGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGCTSVICSDKTGTLTTNQMSVCKMFIIDKVDGDFCSLN 381 (995)
T ss_dssp HHHHHHSCTTHHHHHHHHHHHHHHHHHHTTEEESCTTHHHHHHTCCEEEEESTTTTBCCCCEEEEEEEEEEEETTEEEEE
T ss_pred HHHHHhcCcchHHHHHHHHHHHHHHhccCCcEeccchhhhhhcCceEEEecCCCCcccCceEEEEEEecCcccCcccccc
Confidence 88999999999999999999999999999999999999999999999999999999999999999875321
Q ss_pred ------CccccccC-----------CC--chHHHHHHhhccceEEe--C-C---cccCChHHHHHHhcc---cccccCCC
Q 001010 511 ------AELEDDMT-----------KV--PVRTQEILASCHALVFV--D-N---KLVGDPLEKAALKGI---DWSYKSDE 562 (1191)
Q Consensus 511 ------~~~~~~~~-----------~~--~~~~~~~la~chsl~~~--~-~---~~~GdPle~all~~~---~~~~~~~~ 562 (1191)
....+... .. -.....+++.||+.... + + +..|||+|.|++++. ++ +....
T Consensus 382 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~alc~~~~~~~~~~~~~~~~~g~p~E~Al~~~a~~~g~-~~~~~ 460 (995)
T 3ar4_A 382 EFSITGSTYAPEGEVLKNDKPIRSGQFDGLVELATICALCNDSSLDFNETKGVYEKVGEATETALTTLVEKMNV-FNTEV 460 (995)
T ss_dssp EEEECCSSSSSCCCEEETTEECCGGGCHHHHHHHHHHHHSCCCEEEEETTTTEEEEESCHHHHHHHHHHHHHCT-TCCCC
T ss_pred eeeccCCCcCCccccccccccccccccHHHHHHHHHHHHcCCCcccccCCCCceeecCCccHHHHHHHHHHcCC-ccccc
Confidence 00000000 00 01234567889976532 1 1 246999999998754 22 11110
Q ss_pred ccccCC--------CCCCcccEEEEecCCCCCCcEEEEEEeCC------eEEEEEeCcHHHHHHhccCC-----------
Q 001010 563 KAMPKR--------GGGNAVQIVQRHHFASHLKRMSVVVRVQE------EFFAFVKGAPETIQDRLTDL----------- 617 (1191)
Q Consensus 563 ~~~~~~--------~~~~~~~il~~~~Fss~~krmsvvv~~~~------~~~~~~KGapE~I~~~~~~~----------- 617 (1191)
...+.. .....+++++++||+|++|||||+++.++ +..+++|||||.|.++|...
T Consensus 461 ~~i~~~~~~~~~~~~~~~~~~~~~~~pF~s~rk~msvi~~~~~g~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~l~~ 540 (995)
T 3ar4_A 461 RNLSKVERANACNSVIRQLMKKEFTLEFSRDRKSMSVYCSPAKSSRAAVGNKMFVKGAPEGVIDRCNYVRVGTTRVPMTG 540 (995)
T ss_dssp TTSCTTTSTTHHHHHHHHHEEEEEEEEEETTTTEEEEEEEESSCCSCSCCCEEEEEECHHHHHHTEEEEEETTEEEECCH
T ss_pred cccccccccccchhhhhhhCceEEEeecCCCCCeeEEEEecCCCCccccceEEEEcCCHHHHHHhcchhhcCCCcccCCH
Confidence 000000 01135789999999999999999998743 47899999999999999532
Q ss_pred --hHHHHHHHHHH--HHhcCeeeeEEEEeCCCCChh--hhhhccccccccCeEEeeeecccCcCCchhHHHHHHHHhcCC
Q 001010 618 --PSSYIETYKKY--THQGSRVLALAFKSLPDMTVS--DARSLHRDEVENGLTFAGFAVFNCPIREDSAKILSELKNSSQ 691 (1191)
Q Consensus 618 --p~~~~~~~~~~--a~~G~RVLalA~k~l~~~~~~--~~~~~~r~~~E~dL~flG~l~~~d~lK~da~~~I~~L~~agi 691 (1191)
.+.+.+.+++| +++|+||||+|||+++..... ......++.+|+|++|+|+++++||+|||++++|++|+++||
T Consensus 541 ~~~~~~~~~~~~~~~a~~GlRvLa~A~k~~~~~~~~~~~~~~~~~~~~e~~l~~lG~~~i~D~lr~~~~~~I~~l~~~Gi 620 (995)
T 3ar4_A 541 PVKEKILSVIKEWGTGRDTLRCLALATRDTPPKREEMVLDDSSRFMEYETDLTFVGVVGMLDPPRKEVMGSIQLCRDAGI 620 (995)
T ss_dssp HHHHHHHHHHHHHHHSTTCCEEEEEEEESSCCCGGGCCTTCGGGHHHHTCSEEEEEEEEEECCBCTTHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHhhhccceEEEEEEEecCccccccccccchhhhhhccCcEEEEEEeecCCCchhHHHHHHHHHHcCC
Confidence 23566778889 999999999999998632211 001234567899999999999999999999999999999999
Q ss_pred cEEEEcCCCHHHHHHHHHHcCCCCCCcEEEeecCCCceeeecCCCccccccCChHHHhcccccceEEEechhhhhhcchH
Q 001010 692 DLAMITGDQALTACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLTDAHDLCIGGDCFEMLQQTS 771 (1191)
Q Consensus 692 ~vvMiTGDn~~TA~~VA~~~gI~~~~~~il~~~~~~~~~~w~~~d~~~~~~~~~~~~~~~~~~~~l~itG~~l~~l~~~~ 771 (1191)
+++|+|||++.||.++|+++||...+. + -.+.+++|+.++.+.+ +
T Consensus 621 ~v~miTGD~~~ta~~ia~~lgi~~~~~------------------~----------------i~~~~~~g~~~~~l~~-~ 665 (995)
T 3ar4_A 621 RVIMITGDNKGTAIAICRRIGIFGENE------------------E----------------VADRAYTGREFDDLPL-A 665 (995)
T ss_dssp EEEEEESSCHHHHHHHHHHHTSSCTTC------------------C----------------CTTTEEEHHHHHTSCH-H
T ss_pred EEEEECCCCHHHHHHHHHHcCcCCCCC------------------c----------------ccceEEEchhhhhCCH-H
Confidence 999999999999999999999963210 0 0124778888877754 4
Q ss_pred HHHhhcCcceEEeecChhhHHHHHHHHhHcCCEEEEEcCCccCHHHHhhCCceEEeccCCCccccccCCcccccccchhh
Q 001010 772 AVLRVIPYVKVFARVAPEQKELILTTFKAVGRMTLMCGDGTNDVGALKQAHVGVALLNAVPPTQSGNSSSEASKDENTKS 851 (1191)
Q Consensus 772 ~~~~~l~~~~VfAR~sP~qK~~iV~~Lq~~g~~V~m~GDG~ND~~ALk~AdVGIAl~~~~~e~~~~asdi~~~~~~~~~~ 851 (1191)
++.+++.+..||||++|+||.++|+.||+.|+.|+|+|||+||++|||+|||||||+ ++++++++++|+++.++
T Consensus 666 ~~~~~~~~~~v~~r~~P~~K~~~v~~l~~~g~~v~~~GDG~ND~~alk~Advgiamg-~g~~~ak~aAd~vl~~~----- 739 (995)
T 3ar4_A 666 EQREACRRACCFARVEPSHKSKIVEYLQSYDEITAMTGDGVNDAPALKKAEIGIAMG-SGTAVAKTASEMVLADD----- 739 (995)
T ss_dssp HHHHHHHHCCEEESCCSSHHHHHHHHHHTTTCCEEEEECSGGGHHHHHHSTEEEEET-TSCHHHHHTCSEEETTC-----
T ss_pred HHHHHHhhCcEEEEeCHHHHHHHHHHHHHCCCEEEEEcCCchhHHHHHHCCeEEEeC-CCCHHHHHhCCEEECCC-----
Confidence 566667788999999999999999999999999999999999999999999999999 56666677777666444
Q ss_pred hhccccccchhhhhhhhccCCCCCCccchhhhhhhcccccccccchHHHHHHHHHHHHHHHHhhcCCCCCCCccccCccc
Q 001010 852 VKSKKSKSASEAASKAMSLNSEGTSKGKASARLEANSRTAGNRHLTAAEMQREKLKKMMEELNEEGDGRSAPIVKLGDAS 931 (1191)
Q Consensus 852 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~klgdAS 931 (1191)
T Consensus 740 -------------------------------------------------------------------------------- 739 (995)
T 3ar4_A 740 -------------------------------------------------------------------------------- 739 (995)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccCCCccCcCCccchhhhhhccchHHHHHHhhhHHHHHHHHHHHHHHHH--hhhccccccchHHHHHhHHHH-HHHHHhh
Q 001010 932 MASPFTAKHASVAPTTDIIRQGRSTLVTTLQMFKILGLNCLATAYVLSV--MYLDGVKLGDVQATISGVFTA-AFFLFIS 1008 (1191)
Q Consensus 932 iaaPFtsk~~~i~~v~~iir~GR~~Lvtt~~~fk~l~l~~li~~~s~sv--ly~~g~~~~d~Q~~~~~~l~~-~~~~~~s 1008 (1191)
++.++.++|++||+++.+.-+..+|...+++.....+.+ ++.....+...|+++.++++. ++.++++
T Consensus 740 ----------~~~~i~~~i~~GR~~~~~i~k~i~~~l~~Ni~~~~~~~~~~~~g~~~pl~~~qil~~nl~~d~~p~l~l~ 809 (995)
T 3ar4_A 740 ----------NFSTIVAAVEEGRAIYNNMKQFIRYLISSNVGEVVCIFLTAALGLPEALIPVQLLWVNLVTDGLPATALG 809 (995)
T ss_dssp ----------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCSSCHHHHHHHHHTTTHHHHHHHT
T ss_pred ----------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcchHHHHHHHHHHHHHHHHHHHhhc
Confidence 566788999999999999999888876655533332222 222235688999999999875 5788999
Q ss_pred ccCCCCccccCCCC---CCccchhhHHHHHHHHHHHHHHHHHHhhhhccc-C--CC----------CCCCCCCCCC----
Q 001010 1009 HARPLPTLSAARPH---PNIFCSYVFLSLMGQFAIHLFFLISSVKEAEKY-M--PD----------ECIEPDADFH---- 1068 (1191)
Q Consensus 1009 ~~~p~~~Ls~~rP~---~~if~~~~~~si~~Q~~i~~~~l~~~~~~~~~~-~--~~----------~~~~~~~~f~---- 1068 (1191)
..+|.+.+.+++|. .++|+..++.+++.+.+++.+..+..+.+...+ . +. .+......|.
T Consensus 810 ~~~~~~~~m~~~P~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 889 (995)
T 3ar4_A 810 FNPPDLDIMDRPPRSPKEPLISGWLFFRYMAIGGYVGAATVGAAAWWFMYAEDGPGVTYHQLTHFMQCTEDHPHFEGLDC 889 (995)
T ss_dssp TCCCCTTGGGSCCCCTTCCSSCHHHHHHHHHHHHHHHHHHHHHHHHHTSSCSSSCCCTTCCGGGCSSCSSCCSCCSCSCC
T ss_pred cCCCChhHHhCCCCCCcccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccchhcccccccccccccccccc
Confidence 99998888776664 679999999999988777754432221111100 0 00 0000011121
Q ss_pred ----CcccchhhhHHHHHHHHhh-heeEe-cCCCcccccccchhHHHHHHHHHHHHHHhhcccchhhhhccceeeCChhH
Q 001010 1069 ----PNLVNTVSYMVNMMIQVAT-FAVNY-MGHPFNQSISENKPFMYALMGAVGFFTVITSDLLRSLNDWLKLVPLPSGL 1142 (1191)
Q Consensus 1069 ----p~~~nt~vfl~~~~~~i~~-~~v~~-~g~Pf~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~lv~~p~~~ 1142 (1191)
+..-.|..|....+.|+.. +.+-+ .+.+|+.+.+.|+++++++++..++.+++. ++|.++.+|+++++|..+
T Consensus 890 ~~~~~~~~~t~~f~~lv~~~~~~~~~~r~~~~~~~~~~~~~n~~l~~~~~~~~~l~~~~~--~~p~~~~~f~~~~l~~~~ 967 (995)
T 3ar4_A 890 EIFEAPEPMTMALSVLVTIEMCNALNSLSENQSLMRMPPWVNIWLLGSICLSMSLHFLIL--YVDPLPMIFKLKALDLTQ 967 (995)
T ss_dssp CGGGCHHHHHHHHHHHHHHHHHHHHTTSCSSCCTTTSCGGGCHHHHHHHHHHHHHHHHHH--HSTHHHHHTTCCCCCHHH
T ss_pred ccccchhhhhHHHHHHHHHHHHHHHHhhccccchhccCCccCHHHHHHHHHHHHHHHHHH--HHHHHHHhhccCCCCHHH
Confidence 1123567777766666643 32222 367888899999999998888776666543 368899999999998754
Q ss_pred HHHHH
Q 001010 1143 RDKLL 1147 (1191)
Q Consensus 1143 ~~~l~ 1147 (1191)
+..++
T Consensus 968 w~~~~ 972 (995)
T 3ar4_A 968 WLMVL 972 (995)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 44433
|
| >1mhs_A Proton pump, plasma membrane ATPase; ION transport, membrane protein, P-type ATPase, active transport, cryo-electron microscopy; 8.00A {Neurospora crassa} SCOP: i.18.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-97 Score=944.60 Aligned_cols=753 Identities=18% Similarity=0.212 Sum_probs=540.6
Q ss_pred CCCCHHHHHHHHhccCCCccCCCCCcHHHHHHHHhhhHH-HHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001010 164 GHSTEAKIAVATEKWGRNVFEYPQPTFQKLMKENCMEPF-FVFQVFCVGLWCLDEYWYYSLFTLFMLFMFESTMAKSRLK 242 (1191)
Q Consensus 164 g~ls~~e~~~~~~~yG~N~i~i~~~s~~~ll~~~~~~pf-~vfqi~~v~lw~l~~y~~ysl~~l~m~vv~~~~~~~~~~r 242 (1191)
.|||++|+++|+++||+|+++.+++++|..|++++.+|+ +++++++++.|++++|+++++ +++++++......+|++|
T Consensus 86 ~GLs~~ea~~r~~~~G~N~l~~~~~~~~~~~l~~f~~~~~~ll~~aai~s~~~g~~~~~~~-i~~vv~i~~~i~~~qe~~ 164 (920)
T 1mhs_A 86 VGLTSEEVVQRRRKYGLNQMKEEKENHFLKFLGFFVGPIQFVMEGAAVLAAGLEDWVDFGV-ICGLLLLNAVVGFVQEFQ 164 (920)
T ss_dssp CCCCSHHHHHHHHHTSSSSCCCCCCSSHHHHTHHHHHHHHHHHHHHHHHCTTCSCSSHHHH-HHHHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHhcCCCccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHH-HHHHHHHHHHHHHHHHHH
Confidence 567888999999999999999888899999999999999 567777788888888876553 334444444445566666
Q ss_pred HHHHHHhhcc-CCceEEEEECCEEEEEecCCCCCCcEEEEcCCCCCCCCCceeeeeEEEEecc--eeeecccccCCCCce
Q 001010 243 TLTEIRRVRV-DNQTIMVHRCGKWVKLAGTDLVPGDVVSIGRSSGQTGEDKSVPADMLILGGS--AIVNEAILTGESTPQ 319 (1191)
Q Consensus 243 ~~~~l~~m~~-~~~~v~V~R~g~~~~I~s~eLvpGDIV~l~~g~gd~~~~~~VPaD~iLl~G~--~~VdES~LTGES~Pv 319 (1191)
+.+.++++.. .+..++|+|||+|++|+++||+|||+|.|++| ++|||||+|++|+ +.||||+|||||.|+
T Consensus 165 a~~a~~~L~~l~~~~a~V~RdG~~~~I~~~eLv~GDiV~l~~G-------d~VPaDg~ll~g~~~l~VDES~LTGES~PV 237 (920)
T 1mhs_A 165 AGSIVDELKKTLALKAVVLRDGTLKEIEAPEVVPGDILQVEEG-------TIIPADGRIVTDDAFLQVDQSALTGESLAV 237 (920)
T ss_dssp HHHHHHTTTTCCCSSCEEECSSSEEECCTTTSCTTSEEEECTT-------CBCSSEEEEEEESSCCEEBCTTTSSCCCCE
T ss_pred HHHHHHHhhccCCCEEEEEECCEEEEEEHHHcCCCCEEEeCCC-------CccccceEEEecCceeeeeccccCCCCcce
Confidence 6666666544 46789999999999999999999999999987 7999999999997 599999999999999
Q ss_pred ecccccCCCCccccccccCCCeeEeeceEEeecCCCCCCCCCCCCCcEEEEEEEecccchhhHHHHHhccccccccchhh
Q 001010 320 WKVSIMGRETGEKLSARRDKSHVLFGGTKILQHTPDKTFPLKTPDGGCLAVVLRTGFETSQGKLMRTILFSTERVTANSW 399 (1191)
Q Consensus 320 ~K~~i~~~~~~~~~~~~~~k~~~lfaGT~vlq~~~~~~~~~~~~~g~~~~vV~~TG~~T~~Gkl~r~i~~~~~~~~~~~~ 399 (1191)
.|.+ ++.+|+||.+. +|.+.++|++||.+|..|++.+.+.......++.++
T Consensus 238 ~K~~----------------gd~v~sGT~v~-------------~G~~~~~V~~tG~~T~~g~I~~lv~~a~~~~~~l~~ 288 (920)
T 1mhs_A 238 DKHK----------------GDQVFASSAVK-------------RGEAFVVITATGDNTFVGRAAALVNAASGGSGHFTE 288 (920)
T ss_dssp ECCS----------------SCEECSCBCCS-------------CCCEEEEEEECSTTCSTTTTTSSCCCCCCCCCHHHH
T ss_pred EecC----------------CCeeecCceEe-------------cceEEEEEEEeCCcCHHHHHHHHHhhcccCCchHHH
Confidence 9975 68999999998 899999999999999999999888766665666555
Q ss_pred hHHHHHHHHHHHHHHhhheeeeecccCCCcchhHHHHHHHHhhhhccCCCcchHHHHHHHHHHHHHHhcCccccCCCccc
Q 001010 400 ESGLFILFLVVFAVIAAGYVLKKGMEDPTRSKYKLFLSCSLIITSVIPPELPMELSIAVNTSLIALARRGIFCTEPFRIP 479 (1191)
Q Consensus 400 ~~~~fi~~lli~aii~~~~~~~~~~~~~~~~~~~~~l~~i~iit~~vP~~LP~~lslav~~s~~~L~k~~I~~~~p~~i~ 479 (1191)
....+..++++++++.+..+|..++. .+.++...+..++.+++++|||+||+++++++..+..+|+|+|++|+++.++|
T Consensus 289 ~~~~i~~~l~~~~~~~~~i~~~~~~~-~~~~~~~~l~~av~llV~aiP~aLp~~vti~la~g~~~mak~~ilvk~~~aiE 367 (920)
T 1mhs_A 289 VLNGIGTILLILVIFTLLIVWVSSFY-RSNPIVQILEFTLAITIIGVPVGLPAVVTTTMAVGAAYLAKKKAIVQKLSAIE 367 (920)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTTT-TTCCHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHTTCCCCCTTTHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHh-cCCcHHHHHHHHHHHHHHhCchhHHHHHHHHHHHHHHHHHhCCeEEecCchhh
Confidence 44443333322222222222211211 12346677888999999999999999999999999999999999999999999
Q ss_pred ccCCccEEEecccccccCCceEEEEEeecCCCccccccCCCchHHHHHHhhccceEEeCCcccCChHHHHHHhccccccc
Q 001010 480 FAGKVDMCCFDKTGTLTSDDMEFRGVVGLSNAELEDDMTKVPVRTQEILASCHALVFVDNKLVGDPLEKAALKGIDWSYK 559 (1191)
Q Consensus 480 ~~G~vd~icfDKTGTLT~~~l~v~gv~~~~~~~~~~~~~~~~~~~~~~la~chsl~~~~~~~~GdPle~all~~~~~~~~ 559 (1191)
.+|++|++|||||||||+|+|+|.+++..++.+ +.+.....+.|+.. .++ .|||+|.|++++......
T Consensus 368 ~Lg~v~vIc~DKTGTLT~n~m~v~~~~~~~g~~--------~~~ll~~a~l~~~~--~~~--~~~P~e~Al~~~~~~~~~ 435 (920)
T 1mhs_A 368 SLAGVEILCSDKTGTLTKNKLSLHDPYTVAGVD--------PEDLMLTACLAASR--KKK--GIDAIDKAFLKSLKYYPR 435 (920)
T ss_dssp HHHTCCEEEEETBTTTBSSCSCCCCCBCCSCCC--------CTHHHHHHHHSCCC--SSC--SCCSHHHHHHHHHHHSSS
T ss_pred hhccCcEEEECCCCCccccceeEEEEeecCCCC--------HHHHHHHHHHhcCC--ccc--CCChHHHHHHHHHHhccc
Confidence 999999999999999999999999887543310 11223333344432 111 159999999987642211
Q ss_pred CCCccccCCCCCCcccEEEEecCCCCCCcEEEEEEe-CCeEEEEEeCcHHHHHHhccC---Ch----HHHHHHHHHHHHh
Q 001010 560 SDEKAMPKRGGGNAVQIVQRHHFASHLKRMSVVVRV-QEEFFAFVKGAPETIQDRLTD---LP----SSYIETYKKYTHQ 631 (1191)
Q Consensus 560 ~~~~~~~~~~~~~~~~il~~~~Fss~~krmsvvv~~-~~~~~~~~KGapE~I~~~~~~---~p----~~~~~~~~~~a~~ 631 (1191)
. .+....+++++.+||+|.+|||+++++. +++.++++|||||.|.++|.. ++ +.+.+..++|+++
T Consensus 436 ~-------~~~~~~~~~~~~~pF~s~~k~ms~iv~~~~g~~~~~~KGape~il~~c~~~~~~~~~~~~~~~~~~~~~a~~ 508 (920)
T 1mhs_A 436 A-------KSVLSKYKVLQFHPFDPVSKKVVAVVESPQGERITCVKGAPLFVLKTVEEDHPIPEEVDQAYKNKVAEFATR 508 (920)
T ss_dssp C-------CGGGSCCCEEEEEEEETTTTEEEEEECCSSSSCEEEEEECHHHHHHHCCCSSCCCHHHHHHHHHHHHHHHTS
T ss_pred c-------hhhccccceeEEeeccCCCCeEEEEEEeCCCcEEEEEeCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHhC
Confidence 0 0112357889999999999999999975 456778999999999999954 33 4566778999999
Q ss_pred cCeeeeEEEEeCCCCChhhhhhccccccccCeEEeeeecccCcCCchhHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHc
Q 001010 632 GSRVLALAFKSLPDMTVSDARSLHRDEVENGLTFAGFAVFNCPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQV 711 (1191)
Q Consensus 632 G~RVLalA~k~l~~~~~~~~~~~~r~~~E~dL~flG~l~~~d~lK~da~~~I~~L~~agi~vvMiTGDn~~TA~~VA~~~ 711 (1191)
|+||+++|||.. |++++|+|+++++||+|||++++|++|+++||+++|+||||+.||.+||+++
T Consensus 509 G~RvL~vA~~~~----------------e~~l~~lGli~i~Dp~R~ea~~aI~~l~~aGI~v~MiTGD~~~TA~aIA~~l 572 (920)
T 1mhs_A 509 GFRSLGVARKRG----------------EGSWEILGIMPCMDPPRHDTYKTVCEAKTLGLSIKMLTGDAVGIARETSRQL 572 (920)
T ss_dssp SCCCCEECCCSS----------------SCSCCCCBBCCCCCCCCHHHHHHHHHHHHHTCEEEEEESSCHHHHHHHHHHH
T ss_pred CCEEEEEEEecc----------------ccccEEEEEEEEeccccccHHHHHHHHhhcCceEEEEcCCCHHHHHHHHHHc
Confidence 999999999731 5789999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCcEEEeecCCCceeeecCCCccccccCChHHHhcccccceEEEechhhhhhcchHHHHhhcCcceEEeecChhhH
Q 001010 712 HIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLTDAHDLCIGGDCFEMLQQTSAVLRVIPYVKVFARVAPEQK 791 (1191)
Q Consensus 712 gI~~~~~~il~~~~~~~~~~w~~~d~~~~~~~~~~~~~~~~~~~~l~itG~~l~~l~~~~~~~~~l~~~~VfAR~sP~qK 791 (1191)
||.... ++ ...++++|+ +.+ ..+++.+.+.++.||||++|+||
T Consensus 573 GI~~~~---~~-------------------------------~~~~~~~g~--~~~-~~~el~~~~~~~~V~arv~P~~K 615 (920)
T 1mhs_A 573 GLGTNI---YN-------------------------------AERLGLGGG--GDM-PGSEVYDFVEAADGFAEVFPQHK 615 (920)
T ss_dssp TSSCSC---CC-------------------------------SSSSSSCBC--CCG-GGGGGGTTTTTTSCEESCCSTHH
T ss_pred CCCccc---cC-------------------------------ccceeecCc--ccC-CHHHHHHHHhhCeEEEEeCHHHH
Confidence 996310 00 001123333 111 12345667778899999999999
Q ss_pred HHHHHHHhHcCCEEEEEcCCccCHHHHhhCCceEEeccCCCccccccCCcccccccchhhhhccccccchhhhhhhhccC
Q 001010 792 ELILTTFKAVGRMTLMCGDGTNDVGALKQAHVGVALLNAVPPTQSGNSSSEASKDENTKSVKSKKSKSASEAASKAMSLN 871 (1191)
Q Consensus 792 ~~iV~~Lq~~g~~V~m~GDG~ND~~ALk~AdVGIAl~~~~~e~~~~asdi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 871 (1191)
.++|+.||+.|+.|+|||||+||+||||+|||||||+ ++++++++++|+++.++
T Consensus 616 ~~iV~~Lq~~g~~Vam~GDGvNDapaLk~AdvGIAmg-~gtd~ak~aADiVl~~~------------------------- 669 (920)
T 1mhs_A 616 YNVVEILQQRGYLVAMTGDGVNDAPSLKKADTGIAVE-GSSDAARSAADIVFLAP------------------------- 669 (920)
T ss_dssp HHHHHHHHTTTCCCEECCCCGGGHHHHHHSSEEEEET-TSCHHHHHSSSEEESSC-------------------------
T ss_pred HHHHHHHHhCCCeEEEEcCCcccHHHHHhCCcCcccc-cccHHHHHhcCeEEcCC-------------------------
Confidence 9999999999999999999999999999999999999 56778888888887655
Q ss_pred CCCCCccchhhhhhhcccccccccchHHHHHHHHHHHHHHHHhhcCCCCCCCccccCcccccCCCccCcCCccchhhhhh
Q 001010 872 SEGTSKGKASARLEANSRTAGNRHLTAAEMQREKLKKMMEELNEEGDGRSAPIVKLGDASMASPFTAKHASVAPTTDIIR 951 (1191)
Q Consensus 872 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~klgdASiaaPFtsk~~~i~~v~~iir 951 (1191)
+++.+++.|+
T Consensus 670 ----------------------------------------------------------------------~~~~I~~ai~ 679 (920)
T 1mhs_A 670 ----------------------------------------------------------------------GLGAIIDALK 679 (920)
T ss_dssp ----------------------------------------------------------------------CSHHHHHHHH
T ss_pred ----------------------------------------------------------------------CHHHHHHHHH
Confidence 4567788999
Q ss_pred ccchHHHHHHhhhHH-HHHHHHH-HHHHHHHhhhccccccchHHHHHhHHHHHHHHHhhccCCCCccccCCCC-CCccch
Q 001010 952 QGRSTLVTTLQMFKI-LGLNCLA-TAYVLSVMYLDGVKLGDVQATISGVFTAAFFLFISHARPLPTLSAARPH-PNIFCS 1028 (1191)
Q Consensus 952 ~GR~~Lvtt~~~fk~-l~l~~li-~~~s~svly~~g~~~~d~Q~~~~~~l~~~~~~~~s~~~p~~~Ls~~rP~-~~if~~ 1028 (1191)
+||.+.-+.-+...| ++.|.-. .+..+.. .+.|..++..|.++.+++..++.+.++..++-..-.+++|. .+++..
T Consensus 680 ~gR~~~~ni~k~i~~~l~~n~~~~~~~~~~~-~~~~~~l~~~~il~~~l~~d~~~lal~~e~~~~~~~P~~~~~~~~~~~ 758 (920)
T 1mhs_A 680 TSRQIFHRMYAYVVYRIALSIHLEIFLGLWI-AILNRSLNIELVVFIAIFADVATLAIAYDNAPYSQTPVKWNLPKLWGM 758 (920)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HSCSCCCCHHHHHHHHHHHTTHHHHCCCCCSGGGGSCCCCCSSSCSSC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHhccCCHHHHHHHHHHHHHHhhhhcccCcccccCCCCchHHHHHHH
Confidence 999998877665443 2222211 1111111 22344477888888888887777777766654332222222 222222
Q ss_pred hhHHHHHHHHHHHHHH-HHHHhhhhcccCCCCCCCCCCCCCCcccchhhhHHHHHHHHhhheeEecCCCcccccccchhH
Q 001010 1029 YVFLSLMGQFAIHLFF-LISSVKEAEKYMPDECIEPDADFHPNLVNTVSYMVNMMIQVATFAVNYMGHPFNQSISENKPF 1107 (1191)
Q Consensus 1029 ~~~~si~~Q~~i~~~~-l~~~~~~~~~~~~~~~~~~~~~f~p~~~nt~vfl~~~~~~i~~~~v~~~g~Pf~~~~~~N~~~ 1107 (1191)
..+.+++ +.+++ ..|.+.+. +....... ......+|..|+...+.|+......-.-+||.++. .|+++
T Consensus 759 ~~~~g~~----~~~~~~~~~~~~~~--~~~~~~~~----~~~~~~~T~~f~~lv~~~~~~~~~~R~~~~~~~~~-~~~~~ 827 (920)
T 1mhs_A 759 SVLLGVV----LAVGTWITVTTMYA--QGENGGIV----QNFGNMDEVLFLQISLTENWLIFITRANGPFWSSI-PSWQL 827 (920)
T ss_dssp HHHHHHH----HHHHHHHHHHHHTT--TTTTCCSS----SSSSSHHHHHHHHHHHHHHHHTTSSSCSSSCSCCS-CTHHH
T ss_pred HHHHHHH----HHHHHHHHHHHHHH--hccccccc----chhhHHHHHHHHHHHHHHHHHHHHhccchhhhcCc-hHHHH
Confidence 2222221 11111 11111111 10000000 01124689999887777765433222234455543 56666
Q ss_pred HHHHHHHHHHHHHhhcccchhhhhccceeeCCh
Q 001010 1108 MYALMGAVGFFTVITSDLLRSLNDWLKLVPLPS 1140 (1191)
Q Consensus 1108 ~~~l~~~~~~~~~~~~~~~~~~~~~~~lv~~p~ 1140 (1191)
+.++++..++.+++. .+| +|+..|++.
T Consensus 828 ~~~~~~~~~~~~~~~--~~~----~f~~~~l~~ 854 (920)
T 1mhs_A 828 SGAIFLVDILATCFT--IWG----WFEHSDTSI 854 (920)
T ss_dssp HHHHHHHHHHHHHHH--SSS----STTSCSHHH
T ss_pred HHHHHHHHHHHHHHH--Hhh----hhccCCCCH
Confidence 665555554444432 233 566665543
|
| >3b8c_A ATPase 2, plasma membrane-type; P-type ATPase, proton pump, ATP-binding, hydrogen ION transport, hydrolase, ION transport; HET: ACP; 3.60A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-97 Score=949.24 Aligned_cols=653 Identities=21% Similarity=0.228 Sum_probs=497.5
Q ss_pred ChhhhHHhhhhcCCCCCHHHHHHHHhccCCCccCCCCCcHHHHHHHHhhhHHH-HHHHHHHHHHhhh-------hHHHHH
Q 001010 151 PTKETFGYYLKCTGHSTEAKIAVATEKWGRNVFEYPQPTFQKLMKENCMEPFF-VFQVFCVGLWCLD-------EYWYYS 222 (1191)
Q Consensus 151 ~~~~~~~~~~~~~g~ls~~e~~~~~~~yG~N~i~i~~~s~~~ll~~~~~~pf~-vfqi~~v~lw~l~-------~y~~ys 222 (1191)
+.++.++.+.++..|||++|+++|+++||+|+++.+++++|..|++++.+||+ ++++++++.|+++ +|+. +
T Consensus 18 ~~~~~~~~l~~~~~GLs~~e~~~r~~~~G~N~l~~~~~~~~~~~l~~~~~p~~~il~~aaiis~~l~~~~~~~~~~~~-~ 96 (885)
T 3b8c_A 18 PIEEVFQQLKCSREGLTTQEGEDRIQIFGPNKLEEKKESKLLKFLGFMWNPLSWVMEMAAIMAIALANGDGRPPDWQD-F 96 (885)
T ss_dssp STTCCTTTSSSCSSCSTHHHHHHHSSSCCSCCTTTTCCCTTSSTTSCCCGGGSSHHHHHHHGGGGSSCCTTSCSCCTT-H
T ss_pred CHHHHHHHhCCCCCCCCHHHHHHHHHhcCCCccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccHHH-H
Confidence 35667777777666789999999999999999998888888999999999995 6666667777775 4443 4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhcc-CCceEEEEECCEEEEEecCCCCCCcEEEEcCCCCCCCCCceeeeeEEEE
Q 001010 223 LFTLFMLFMFESTMAKSRLKTLTEIRRVRV-DNQTIMVHRCGKWVKLAGTDLVPGDVVSIGRSSGQTGEDKSVPADMLIL 301 (1191)
Q Consensus 223 l~~l~m~vv~~~~~~~~~~r~~~~l~~m~~-~~~~v~V~R~g~~~~I~s~eLvpGDIV~l~~g~gd~~~~~~VPaD~iLl 301 (1191)
..+++++++......++++|+.+.++++.. .+..++|+|||+|++|+++||+|||+|.|++| ++|||||+|+
T Consensus 97 ~~I~~~v~i~~~l~~~qe~ka~~al~~L~~~~~~~a~V~RdG~~~~I~~~~Lv~GDiV~l~~G-------d~IPaDg~ll 169 (885)
T 3b8c_A 97 VGIICLLVINSTISFIEENNAGNAAAALMAGLAPKTKVLRDGKWSEQEAAILVPGDIVSIKLG-------DIIPADARLL 169 (885)
T ss_dssp HHHHHHTTTTTTTTTTTTTTTTTHHHHTTTSCSCCCCCCCSSCSCCCCTTTTCTTSBCCCCSS-------CCCSSCCCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCeEEEEECCEEEEEEHHHCCCCCEEEECCC-------CEEeeceEEE
Confidence 444444333333334455555445544433 46788999999999999999999999999987 7999999999
Q ss_pred ecce-eeecccccCCCCceecccccCCCCccccccccCCCeeEeeceEEeecCCCCCCCCCCCCCcEEEEEEEecccchh
Q 001010 302 GGSA-IVNEAILTGESTPQWKVSIMGRETGEKLSARRDKSHVLFGGTKILQHTPDKTFPLKTPDGGCLAVVLRTGFETSQ 380 (1191)
Q Consensus 302 ~G~~-~VdES~LTGES~Pv~K~~i~~~~~~~~~~~~~~k~~~lfaGT~vlq~~~~~~~~~~~~~g~~~~vV~~TG~~T~~ 380 (1191)
+|++ .||||+|||||.|+.|.+ ++.+|+||.|. +|.+.++|++||.+|..
T Consensus 170 ~g~~l~VdES~LTGES~Pv~K~~----------------g~~v~~GT~v~-------------~G~~~~~V~~tG~~T~~ 220 (885)
T 3b8c_A 170 EGDPLKVDQSALTGESLPVTKHP----------------GQEVFSGSTCK-------------QGEIEAVVIATGVHTFF 220 (885)
T ss_dssp CSSCBCCCCCSTTCCSSCCCBSS----------------CCCCCSCCCCC-------------SCCCCCBCCSCTTTTTS
T ss_pred EcCcccccccccCCCCcceEecC----------------CCccccCeEEe-------------eeEEEEEEEEcCcccHH
Confidence 9975 899999999999999975 67899999999 79999999999999999
Q ss_pred hHHHHHhccccccccchhhhHHHHHHH----HHH-HHHHhhheeeeecccCCCcchhHHHHHHHHhhhhccCCCcchHHH
Q 001010 381 GKLMRTILFSTERVTANSWESGLFILF----LVV-FAVIAAGYVLKKGMEDPTRSKYKLFLSCSLIITSVIPPELPMELS 455 (1191)
Q Consensus 381 Gkl~r~i~~~~~~~~~~~~~~~~fi~~----lli-~aii~~~~~~~~~~~~~~~~~~~~~l~~i~iit~~vP~~LP~~ls 455 (1191)
|++.+.+.. .++.++.++....+..+ +++ ++++.+..++.. ..++...+..++.+++++|||+||++++
T Consensus 221 g~i~~lv~~-~~~~~~lq~~~~~i~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~v~llv~aiP~aLp~~vt 294 (885)
T 3b8c_A 221 GKAAHLVDS-TNQVGHFQKVLTAIGNFCICSIAIGMVIEIIVMYPIQ-----RRKYRDGIDNLLVLLIGGIPIAMPTVLS 294 (885)
T ss_dssp TTCCCSCCS-CSCCSTTTTTTHHHHHHHHHHHHHHHHHHSTTTTTTT-----CSCSTTHHHHHHHHTTTTCCSSTTTHHH
T ss_pred HHHHHHHhc-ccccChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-----cCcHHHHHHHHHHHHHHHhhhHHHHHHH
Confidence 999887654 34455555444333222 111 111111122111 2345567888999999999999999999
Q ss_pred HHHHHHHHHHHhcCccccCCCcccccCCccEEEecccccccCCceEEEEEe-ecCCCccccccCCCchHHHHHHhhccce
Q 001010 456 IAVNTSLIALARRGIFCTEPFRIPFAGKVDMCCFDKTGTLTSDDMEFRGVV-GLSNAELEDDMTKVPVRTQEILASCHAL 534 (1191)
Q Consensus 456 lav~~s~~~L~k~~I~~~~p~~i~~~G~vd~icfDKTGTLT~~~l~v~gv~-~~~~~~~~~~~~~~~~~~~~~la~chsl 534 (1191)
++++.+..+|+|+|++|+++.++|.+|++|++|||||||||+|+|+|.... .... ....+.+.....+.|+..
T Consensus 295 i~la~g~~r~ak~~ilvk~~~aiE~Lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~------~~~~~~~ll~~aa~~~~~ 368 (885)
T 3b8c_A 295 VTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLVEVFC------KGVEKDQVLLFAAMASRV 368 (885)
T ss_dssp HTTTHHHHHHTTTSCCCSSGGGHHHHTTCCCCEEECCCCCSCCCCCCCSCCCCSSC------SSTTHHHHHHHHHHHCCS
T ss_pred HHHHHHHHHHHhCCeEeCCchHHHHHhCCCEEEECCCCCcccCceEEEEEEEeccC------CCCCHHHHHHHHHHHhCC
Confidence 999999999999999999999999999999999999999999999996321 1100 000122334455667642
Q ss_pred EEeCCcccCChHHHHHHhcccccccCCCccccCCCCCCcccEEEEecCCCCCCcEEEEEEe-CCeEEEEEeCcHHHHHHh
Q 001010 535 VFVDNKLVGDPLEKAALKGIDWSYKSDEKAMPKRGGGNAVQIVQRHHFASHLKRMSVVVRV-QEEFFAFVKGAPETIQDR 613 (1191)
Q Consensus 535 ~~~~~~~~GdPle~all~~~~~~~~~~~~~~~~~~~~~~~~il~~~~Fss~~krmsvvv~~-~~~~~~~~KGapE~I~~~ 613 (1191)
. .|||+|.|++++.+-. ......+++++.+||+|.+|||+++++. +++.++++|||||.+.++
T Consensus 369 ~------~~~p~~~Al~~~~~~~----------~~~~~~~~~~~~~pF~s~~k~~sv~~~~~~g~~~~~~KGa~e~il~~ 432 (885)
T 3b8c_A 369 E------NQDAIDAAMVGMLADP----------KEARAGIREVHFLPFNPVDKRTALTYIDGSGNWHRVSKGAPEQILEL 432 (885)
T ss_dssp S------SCCSHHHHHHHTTCCT----------TCCCCSSCCBCCCCCCTTTCCCCCBBCSSSSCBCBCCCCSGGGTSSS
T ss_pred C------CCCchHHHHHHHhhch----------hhHhhcCceeecccCCcccceEEEEEEecCCcEEEEEeCCHHHHHHh
Confidence 1 4899999999876410 0112346678889999999999998875 556778999999999999
Q ss_pred cc---CChHHHHHHHHHHHHhcCeeeeEEEEeCCCCChhhhhhccccccccCeEEeeeecccCcCCchhHHHHHHHHhcC
Q 001010 614 LT---DLPSSYIETYKKYTHQGSRVLALAFKSLPDMTVSDARSLHRDEVENGLTFAGFAVFNCPIREDSAKILSELKNSS 690 (1191)
Q Consensus 614 ~~---~~p~~~~~~~~~~a~~G~RVLalA~k~l~~~~~~~~~~~~r~~~E~dL~flG~l~~~d~lK~da~~~I~~L~~ag 690 (1191)
|. ..++++.+..++|+++|+||+++|||++++. .++..|+|++|+|+++++||+|||++++|++|+++|
T Consensus 433 c~~~~~~~~~~~~~~~~~a~~G~rvl~vA~~~~~~~--------~~~~~e~~l~~lGli~i~Dp~R~~a~~aI~~l~~aG 504 (885)
T 3b8c_A 433 AKASNDLSKKVLSIIDKYAERGLRSLAVARQVVPEK--------TKESPGAPWEFVGLLPLFDPPRHDSAETIRRALNLG 504 (885)
T ss_dssp SCCCSTTTTTHHHHHHHHTTTTCEEEEECCBCCCSS--------SSSCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHTT
T ss_pred ccCchhhHHHHHHHHHHHHhCCCeEEEEEEeccccc--------cccccccCcEEEEEEEeecccchhHHHHHHHHHHcC
Confidence 94 4677899999999999999999999988642 235678999999999999999999999999999999
Q ss_pred CcEEEEcCCCHHHHHHHHHHcCCCCCCcEEEeecCCCceeeecCCCccccccCChHHHhcccccceEEEechhhhhhcch
Q 001010 691 QDLAMITGDQALTACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLTDAHDLCIGGDCFEMLQQT 770 (1191)
Q Consensus 691 i~vvMiTGDn~~TA~~VA~~~gI~~~~~~il~~~~~~~~~~w~~~d~~~~~~~~~~~~~~~~~~~~l~itG~~l~~l~~~ 770 (1191)
|+++|+||||+.||.+||+++||..+. + +.. +++|..++...+.
T Consensus 505 I~v~MiTGD~~~tA~~iA~~lGi~~~~---~----~~~-----------------------------~l~g~~~~~~~~~ 548 (885)
T 3b8c_A 505 VNVKMITGDQLAIGKETGRRLGMGTNM---Y----PSS-----------------------------ALLGTHKDANLAS 548 (885)
T ss_dssp CCCEEEESSCHHHHTHHHHTTTCTTCC---S----TTS-----------------------------SCCBGGGGTTSCC
T ss_pred CcEEEEcCCChHHHHHHHHHhCCcccc---C----Ccc-----------------------------eeeccccccccch
Confidence 999999999999999999999995310 0 000 1223333221112
Q ss_pred HHHHhhcCcceEEeecChhhHHHHHHHHhHcCCEEEEEcCCccCHHHHhhCCceEEeccCCCccccccCCcccccccchh
Q 001010 771 SAVLRVIPYVKVFARVAPEQKELILTTFKAVGRMTLMCGDGTNDVGALKQAHVGVALLNAVPPTQSGNSSSEASKDENTK 850 (1191)
Q Consensus 771 ~~~~~~l~~~~VfAR~sP~qK~~iV~~Lq~~g~~V~m~GDG~ND~~ALk~AdVGIAl~~~~~e~~~~asdi~~~~~~~~~ 850 (1191)
.++.+++.++.||||++|+||.++|+.||+.|+.|+|||||+||+||||+|||||||+ ++++++++++|+++.++
T Consensus 549 ~~l~~~~~~~~v~arv~P~~K~~iV~~lq~~g~~Vam~GDGvNDapaLk~AdvGIAmg-~gtd~ak~aADivl~~~---- 623 (885)
T 3b8c_A 549 IPVEELIEKADGFAGVFPEHKYEIVKKLQERKHIVGMTGDGVNDAPALKKADIGIAVA-DATDAARGASDIVLTEP---- 623 (885)
T ss_dssp SCHHHHHHTSCCEECCCHHHHHHHHHHHHHTTCCCCBCCCSSTTHHHHHHSSSCCCCS-SSHHHHGGGCSSCCSSC----
T ss_pred hHHHHHHhhCcEEEEECHHHHHHHHHHHHHCCCeEEEEcCCchhHHHHHhCCEeEEeC-CccHHHHHhcceeeccC----
Confidence 2345566678899999999999999999999999999999999999999999999999 46777888888877554
Q ss_pred hhhccccccchhhhhhhhccCCCCCCccchhhhhhhcccccccccchHHHHHHHHHHHHHHHHhhcCCCCCCCccccCcc
Q 001010 851 SVKSKKSKSASEAASKAMSLNSEGTSKGKASARLEANSRTAGNRHLTAAEMQREKLKKMMEELNEEGDGRSAPIVKLGDA 930 (1191)
Q Consensus 851 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~klgdA 930 (1191)
T Consensus 624 -------------------------------------------------------------------------------- 623 (885)
T 3b8c_A 624 -------------------------------------------------------------------------------- 623 (885)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cccCCCccCcCCccchhhhhhccchHHHHHHhhhHHHHHHHH--HHHHHHHHhhhccccccchHHHHHhHHHHHHHHHhh
Q 001010 931 SMASPFTAKHASVAPTTDIIRQGRSTLVTTLQMFKILGLNCL--ATAYVLSVMYLDGVKLGDVQATISGVFTAAFFLFIS 1008 (1191)
Q Consensus 931 SiaaPFtsk~~~i~~v~~iir~GR~~Lvtt~~~fk~l~l~~l--i~~~s~svly~~g~~~~d~Q~~~~~~l~~~~~~~~s 1008 (1191)
+++++++.|++||.+..+.-+...|...+++ +..+....+ .....+...|.++.+++.....+.++
T Consensus 624 -----------~~~~I~~ai~~gR~~~~ni~~~i~~~l~~n~~~~~~~~~~~~-~~~~~l~p~~il~i~l~~d~~~l~l~ 691 (885)
T 3b8c_A 624 -----------GLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVFGFMLIAL-IWEFDFSAFMVLIIAILNDGTIMTIS 691 (885)
T ss_dssp -----------SHHHHTHHHHTHHHHHHHHHHHHHHHHHHTTTTTSTTHHHHS-SCSSCSCHHHHHHHHHHHHTTTCCCC
T ss_pred -----------chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-ccCcCcCHHHHHHHHHHHHHHHHhhc
Confidence 4567889999999998887776665433322 111112222 22346889999999888766544444
Q ss_pred c
Q 001010 1009 H 1009 (1191)
Q Consensus 1009 ~ 1009 (1191)
.
T Consensus 692 ~ 692 (885)
T 3b8c_A 692 K 692 (885)
T ss_dssp C
T ss_pred c
Confidence 3
|
| >3rfu_A Copper efflux ATPase; alpha helical, CPC, CXXC, ATP-binding, hydrolase, ION transp magnesium, Cu+, membrane, metal-binding; 3.20A {Legionella pneumophila subsp} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-72 Score=704.51 Aligned_cols=469 Identities=21% Similarity=0.265 Sum_probs=386.5
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc-CCceEEEEE-CCEEEEEecCCCCCCcEEEEcCCCCCCCCCce
Q 001010 216 DEYWYYSLFTLFMLFMFESTMAKSRLKTLTEIRRVRV-DNQTIMVHR-CGKWVKLAGTDLVPGDVVSIGRSSGQTGEDKS 293 (1191)
Q Consensus 216 ~~y~~ysl~~l~m~vv~~~~~~~~~~r~~~~l~~m~~-~~~~v~V~R-~g~~~~I~s~eLvpGDIV~l~~g~gd~~~~~~ 293 (1191)
+.||..+.++++++++......+++.|+.+.++++.. .|..++|+| ||++++|++++|+|||+|.|++| ++
T Consensus 185 ~~yfe~a~~ii~~~llg~~le~~a~~~~~~ai~~L~~l~p~~a~vv~~dg~~~~v~~~~l~~GDiv~v~~G-------e~ 257 (736)
T 3rfu_A 185 AVYFEAAAVITTLVLLGQVLELKAREQTGSAIRALLKLVPESAHRIKEDGSEEEVSLDNVAVGDLLRVRPG-------EK 257 (736)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHHHCCCSSHHHHHTCCCCCEEEEEETTEEEEEEETTTCCTTCEECCCSS-------EE
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEecCCEEEEEEHhhCCCCCEEEECCC-------Cc
Confidence 3467666666666677677777777776667776654 578888888 99999999999999999999987 89
Q ss_pred eeeeEEEEecceeeecccccCCCCceecccccCCCCccccccccCCCeeEeeceEEeecCCCCCCCCCCCCCcEEEEEEE
Q 001010 294 VPADMLILGGSAIVNEAILTGESTPQWKVSIMGRETGEKLSARRDKSHVLFGGTKILQHTPDKTFPLKTPDGGCLAVVLR 373 (1191)
Q Consensus 294 VPaD~iLl~G~~~VdES~LTGES~Pv~K~~i~~~~~~~~~~~~~~k~~~lfaGT~vlq~~~~~~~~~~~~~g~~~~vV~~ 373 (1191)
|||||+|++|++.||||+|||||.|+.|.+ ++.+|+||.+. +|.+.+.|++
T Consensus 258 IPaDg~vl~G~~~VDES~LTGES~Pv~K~~----------------gd~v~~Gt~~~-------------~G~~~~~v~~ 308 (736)
T 3rfu_A 258 IPVDGEVQEGRSFVDESMVTGEPIPVAKEA----------------SAKVIGATINQ-------------TGSFVMKALH 308 (736)
T ss_dssp CCSCEEECSSCEEEECSSSTTCSSCEEECT----------------TCEECTTCEEE-------------SCCCCEEECC
T ss_pred ccccEEEEECceEeeecccCCccccEEecc----------------CCcCCCceEec-------------cceEEEEEEE
Confidence 999999999999999999999999999985 77899999999 8999999999
Q ss_pred ecccchhhHHHHHhccccccccch----hhhHHHHHHHHHHHHHHhhheeeeecccCCCcchhHHHHHHHHhhhhccCCC
Q 001010 374 TGFETSQGKLMRTILFSTERVTAN----SWESGLFILFLVVFAVIAAGYVLKKGMEDPTRSKYKLFLSCSLIITSVIPPE 449 (1191)
Q Consensus 374 TG~~T~~Gkl~r~i~~~~~~~~~~----~~~~~~fi~~lli~aii~~~~~~~~~~~~~~~~~~~~~l~~i~iit~~vP~~ 449 (1191)
||.+|..|++++.+...+.+.++. ++.+.+|+.++++++++.+.+|+..+. ...+...+..++.+++++|||+
T Consensus 309 ~G~~T~l~~I~~lv~~a~~~k~~~q~~~d~~a~~~v~~vl~ia~~~~~~w~~~~~---~~~~~~~l~~ai~vlviacPca 385 (736)
T 3rfu_A 309 VGSDTMLARIVQMVSDAQRSRAPIQRLADTVSGWFVPAVILVAVLSFIVWALLGP---QPALSYGLIAAVSVLIIACPCA 385 (736)
T ss_dssp CSTTSHHHHHHHHHHHHHSSCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCS---SSSTTHHHHHHHHHHHHHCCST
T ss_pred echhhHHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC---CchHHHHHHHHHHhHHHhhhhH
Confidence 999999999999987766555543 455667777777777777666655442 1235567888999999999999
Q ss_pred cchHHHHHHHHHHHHHHhcCccccCCCcccccCCccEEEecccccccCCceEEEEEeecCCCccccccCCCchHHHHHHh
Q 001010 450 LPMELSIAVNTSLIALARRGIFCTEPFRIPFAGKVDMCCFDKTGTLTSDDMEFRGVVGLSNAELEDDMTKVPVRTQEILA 529 (1191)
Q Consensus 450 LP~~lslav~~s~~~L~k~~I~~~~p~~i~~~G~vd~icfDKTGTLT~~~l~v~gv~~~~~~~~~~~~~~~~~~~~~~la 529 (1191)
||+++++++..+..+++|+||+|+++.++|.+|++|++|||||||||+|+|.+.++. .++. .. ..++.
T Consensus 386 L~la~p~a~~~~~~~~a~~gilvk~~~alE~l~~v~~i~fDKTGTLT~g~~~v~~i~-~~~~---------~~--~~~l~ 453 (736)
T 3rfu_A 386 LGLATPMSIMVGVGKGAQSGVLIKNAEALERMEKVNTLVVDKTGTLTEGHPKLTRIV-TDDF---------VE--DNALA 453 (736)
T ss_dssp HHHHHHHHHHHHHHHHHHTTEEESCHHHHHHHTSCCEEEECCBTTTBCSSCEEEEEE-ESSS---------CH--HHHHH
T ss_pred HHHHHHHHHHHHHHHHhhcceeechHHHHHHhcCCCEEEEeCCCCCcCCceEEEEEE-ecCC---------CH--HHHHH
Confidence 999999999999999999999999999999999999999999999999999999987 2220 11 12233
Q ss_pred hccceEEeCCcccCChHHHHHHhcccccccCCCccccCCCCCCcccEEEEecCCCCCCcEEEEEEeCCeEEEEEeCcHHH
Q 001010 530 SCHALVFVDNKLVGDPLEKAALKGIDWSYKSDEKAMPKRGGGNAVQIVQRHHFASHLKRMSVVVRVQEEFFAFVKGAPET 609 (1191)
Q Consensus 530 ~chsl~~~~~~~~GdPle~all~~~~~~~~~~~~~~~~~~~~~~~~il~~~~Fss~~krmsvvv~~~~~~~~~~KGapE~ 609 (1191)
.++++. ....||+++|++++.... .+......+|++..++ ++....+++ .+.+|+++.
T Consensus 454 ~aa~le----~~s~hPla~Aiv~~a~~~---------------~~~~~~~~~f~~~~g~-gv~~~~~g~--~~~~G~~~~ 511 (736)
T 3rfu_A 454 LAAALE----HQSEHPLANAIVHAAKEK---------------GLSLGSVEAFEAPTGK-GVVGQVDGH--HVAIGNARL 511 (736)
T ss_dssp HHHHHH----HSSCCHHHHHHHHHHHTT---------------CCCCCCCSCCCCCTTT-EEEECSSSS--CEEEESHHH
T ss_pred HHHHHh----hcCCChHHHHHHHHHHhc---------------CCCccCcccccccCCc-eEEEEECCE--EEEEcCHHH
Confidence 333332 225799999999876411 0111122367766655 555655554 356799999
Q ss_pred HHHhccCChHHHHHHHHHHHHhcCeeeeEEEEeCCCCChhhhhhccccccccCeEEeeeecccCcCCchhHHHHHHHHhc
Q 001010 610 IQDRLTDLPSSYIETYKKYTHQGSRVLALAFKSLPDMTVSDARSLHRDEVENGLTFAGFAVFNCPIREDSAKILSELKNS 689 (1191)
Q Consensus 610 I~~~~~~~p~~~~~~~~~~a~~G~RVLalA~k~l~~~~~~~~~~~~r~~~E~dL~flG~l~~~d~lK~da~~~I~~L~~a 689 (1191)
+.+...+. +.+.+..++++++|+|++++|+ |.+++|+++++|++|++++++|++|+++
T Consensus 512 ~~~~~~~~-~~~~~~~~~~~~~G~~vl~va~---------------------d~~~~G~i~i~D~i~~~~~~aI~~L~~~ 569 (736)
T 3rfu_A 512 MQEHGGDN-APLFEKADELRGKGASVMFMAV---------------------DGKTVALLVVEDPIKSSTPETILELQQS 569 (736)
T ss_dssp HHHHCCCC-HHHHHHHHHHHHTTCEEEEEEE---------------------TTEEEEEEEEECCBCSSHHHHHHHHHHH
T ss_pred HHHcCCCh-hHHHHHHHHHHhcCCeEEEEEE---------------------CCEEEEEEEeeccchhhHHHHHHHHHHC
Confidence 98876554 4567778999999999999996 5689999999999999999999999999
Q ss_pred CCcEEEEcCCCHHHHHHHHHHcCCCCCCcEEEeecCCCceeeecCCCccccccCChHHHhcccccceEEEechhhhhhcc
Q 001010 690 SQDLAMITGDQALTACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLTDAHDLCIGGDCFEMLQQ 769 (1191)
Q Consensus 690 gi~vvMiTGDn~~TA~~VA~~~gI~~~~~~il~~~~~~~~~~w~~~d~~~~~~~~~~~~~~~~~~~~l~itG~~l~~l~~ 769 (1191)
|++++|+|||+..||.++|+++||.
T Consensus 570 Gi~v~mlTGd~~~~a~~ia~~lgi~------------------------------------------------------- 594 (736)
T 3rfu_A 570 GIEIVMLTGDSKRTAEAVAGTLGIK------------------------------------------------------- 594 (736)
T ss_dssp TCEEEEECSSCHHHHHHHHHHHTCC-------------------------------------------------------
T ss_pred CCeEEEECCCCHHHHHHHHHHcCCC-------------------------------------------------------
Confidence 9999999999999999999999994
Q ss_pred hHHHHhhcCcceEEeecChhhHHHHHHHHhHcCCEEEEEcCCccCHHHHhhCCceEEeccCCCccccccCCcccccc
Q 001010 770 TSAVLRVIPYVKVFARVAPEQKELILTTFKAVGRMTLMCGDGTNDVGALKQAHVGVALLNAVPPTQSGNSSSEASKD 846 (1191)
Q Consensus 770 ~~~~~~~l~~~~VfAR~sP~qK~~iV~~Lq~~g~~V~m~GDG~ND~~ALk~AdVGIAl~~~~~e~~~~asdi~~~~~ 846 (1191)
.+++|++|+||.++|+.||+.|+.|+|+|||.||++||++|||||||++ +++.+++++|++++++
T Consensus 595 -----------~v~a~~~P~~K~~~v~~l~~~g~~V~~vGDG~ND~paL~~AdvGIAmg~-g~d~a~~~AD~vl~~~ 659 (736)
T 3rfu_A 595 -----------KVVAEIMPEDKSRIVSELKDKGLIVAMAGDGVNDAPALAKADIGIAMGT-GTDVAIESAGVTLLHG 659 (736)
T ss_dssp -----------CEECSCCHHHHHHHHHHHHHHSCCEEEEECSSTTHHHHHHSSEEEEESS-SCSHHHHHCSEEECSC
T ss_pred -----------EEEEecCHHHHHHHHHHHHhcCCEEEEEECChHhHHHHHhCCEEEEeCC-ccHHHHHhCCEEEccC
Confidence 3899999999999999999999999999999999999999999999995 5666777777776544
|
| >3j08_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-71 Score=693.38 Aligned_cols=479 Identities=21% Similarity=0.243 Sum_probs=384.7
Q ss_pred HHHHHHHHHHHHHhhhhHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc-CCceEEEEECCEEEEEecCCCCCCc
Q 001010 201 PFFVFQVFCVGLWCLDEYWYY--SLFTLFMLFMFESTMAKSRLKTLTEIRRVRV-DNQTIMVHRCGKWVKLAGTDLVPGD 277 (1191)
Q Consensus 201 pf~vfqi~~v~lw~l~~y~~y--sl~~l~m~vv~~~~~~~~~~r~~~~l~~m~~-~~~~v~V~R~g~~~~I~s~eLvpGD 277 (1191)
..|++++++++.|..++|+|| +.++++++.+......+++.|+.+.++++.. .|..++|+|||+|++|+++||+|||
T Consensus 76 ~a~~~s~~~~~~~~~~~~~~~~~~~~i~~~~~ig~~le~~~~~~~~~~l~~l~~l~~~~a~v~r~g~~~~i~~~~l~~GD 155 (645)
T 3j08_A 76 AAFLASVLSTAGVLPREYSFYETSVLLLAFLLLGRTLEARAKSRTGEAIKKLVGLQAKTAVVIRDGKEIAVPVEEVAVGD 155 (645)
T ss_dssp HHHHHHHHHHHHHCCSCSSCCCSHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHTSCSEEEEEETTEEEEEEGGGCCTTC
T ss_pred HHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCEEEEEEHHHCCCCC
Confidence 456778888888877776444 3444444444455555555544444444322 4789999999999999999999999
Q ss_pred EEEEcCCCCCCCCCceeeeeEEEEecceeeecccccCCCCceecccccCCCCccccccccCCCeeEeeceEEeecCCCCC
Q 001010 278 VVSIGRSSGQTGEDKSVPADMLILGGSAIVNEAILTGESTPQWKVSIMGRETGEKLSARRDKSHVLFGGTKILQHTPDKT 357 (1191)
Q Consensus 278 IV~l~~g~gd~~~~~~VPaD~iLl~G~~~VdES~LTGES~Pv~K~~i~~~~~~~~~~~~~~k~~~lfaGT~vlq~~~~~~ 357 (1191)
+|.|++| ++|||||+|++|++.||||+|||||.|+.|.+ ++.+|+||.+.
T Consensus 156 iv~v~~G-------e~IPaDg~vl~G~~~VdeS~LTGES~Pv~K~~----------------g~~v~~Gt~~~------- 205 (645)
T 3j08_A 156 IVIVRPG-------EKIPVDGVVVEGESYVDESMISGEPVPVLKSK----------------GDEVFGATINN------- 205 (645)
T ss_dssp EEEECTT-------CBCCSEEEEEECCEEEECHHHHCCSSCEEECT----------------TCEECTTCEEC-------
T ss_pred EEEECCC-------CEEeeEEEEEECcEEEEcccccCCCCceecCC----------------CCEeeccEEEe-------
Confidence 9999987 79999999999999999999999999999975 78899999998
Q ss_pred CCCCCCCCcEEEEEEEecccchhhHHHHHhccccccccchhh----hHHHHHHHHHHHHHHhhheeeeecccCCCcchhH
Q 001010 358 FPLKTPDGGCLAVVLRTGFETSQGKLMRTILFSTERVTANSW----ESGLFILFLVVFAVIAAGYVLKKGMEDPTRSKYK 433 (1191)
Q Consensus 358 ~~~~~~~g~~~~vV~~TG~~T~~Gkl~r~i~~~~~~~~~~~~----~~~~fi~~lli~aii~~~~~~~~~~~~~~~~~~~ 433 (1191)
+|.+.+.|++||.+|..|++++.+.....+.++.++ .+.+|+.++++++++.+.+|+..+ +.++..
T Consensus 206 ------~g~~~~~v~~~G~~T~l~~i~~lv~~a~~~k~~~~~~~d~~~~~~~~~vl~~a~~~~~~~~~~~----~~~~~~ 275 (645)
T 3j08_A 206 ------TGVLKIRATRVGGETLLAQIVKLVEDAMGSKPPIQRLADKVVAYFIPTVLLVAISAFIYWYFIA----HAPLLF 275 (645)
T ss_dssp ------SSCEEEEEEECGGGSHHHHHHHHHSCCCCCCCSHHHHHHHHHHHHHHHHHHHHHHHHHCSSCCC----SCSCCC
T ss_pred ------cCcEEEEEEEcCCccHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc----CCcHHH
Confidence 899999999999999999999999877666665544 455666667777777666665432 123445
Q ss_pred HHHHHHHhhhhccCCCcchHHHHHHHHHHHHHHhcCccccCCCcccccCCccEEEecccccccCCceEEEEEeecCCCcc
Q 001010 434 LFLSCSLIITSVIPPELPMELSIAVNTSLIALARRGIFCTEPFRIPFAGKVDMCCFDKTGTLTSDDMEFRGVVGLSNAEL 513 (1191)
Q Consensus 434 ~~l~~i~iit~~vP~~LP~~lslav~~s~~~L~k~~I~~~~p~~i~~~G~vd~icfDKTGTLT~~~l~v~gv~~~~~~~~ 513 (1191)
.+..++.+++++|||+||+++++++..++.+++|+||+|+++.++|.+|++|++|||||||||+|+|++.++...+.
T Consensus 276 ~~~~~i~vlvia~P~aL~la~p~a~~~~~~~~a~~gilvk~~~~lE~lg~v~~i~fDKTGTLT~~~~~v~~~~~~~~--- 352 (645)
T 3j08_A 276 AFTTLIAVLVVACPCAFGLATPTALTVGMGKGAELGILIKNADALEVAEKVTAVIFDKTGTLTKGKPEVTDLVPLNG--- 352 (645)
T ss_dssp TTTTTHHHHHHHSCTTHHHHHHHHHHHHHHHHHTTCCCCSSTTHHHHGGGCCEEEEEGGGTSSSSCCEEEEEEESSS---
T ss_pred HHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHCCeEecCchHHHHhhCCCEEEEcCcccccCCCeEEEEEEeCCC---
Confidence 67788899999999999999999999999999999999999999999999999999999999999999999987532
Q ss_pred ccccCCCchHHHHHHhhccceEEeCCcccCChHHHHHHhcccccccCCCccccCCCCCCcccEEEEecCCCCCCcEEEEE
Q 001010 514 EDDMTKVPVRTQEILASCHALVFVDNKLVGDPLEKAALKGIDWSYKSDEKAMPKRGGGNAVQIVQRHHFASHLKRMSVVV 593 (1191)
Q Consensus 514 ~~~~~~~~~~~~~~la~chsl~~~~~~~~GdPle~all~~~~~~~~~~~~~~~~~~~~~~~~il~~~~Fss~~krmsvvv 593 (1191)
...+.....++|+. ...||++.|++++..-. +.... ... +|.+...+ ++..
T Consensus 353 ------~~~~~l~~aa~~e~-------~s~hPla~Aiv~~a~~~---g~~~~----~~~--------~~~~~~g~-g~~~ 403 (645)
T 3j08_A 353 ------DERELLRLAAIAER-------RSEHPIAEAIVKKALEH---GIELG----EPE--------KVEVIAGE-GVVA 403 (645)
T ss_dssp ------CHHHHHHHHHHHHT-------TCCSHHHHHHHHHHHHT---TCCCC----SCC--------CCEEETTT-EEEE
T ss_pred ------CHHHHHHHHHHHhh-------cCCChhHHHHHHHHHhc---CCCcC----Ccc--------ceEEecCC-ceEE
Confidence 11233334444432 24799999999875311 00000 000 11111111 1211
Q ss_pred EeCCeEEEEEeCcHHHHHHhccCChHHHHHHHHHHHHhcCeeeeEEEEeCCCCChhhhhhccccccccCeEEeeeecccC
Q 001010 594 RVQEEFFAFVKGAPETIQDRLTDLPSSYIETYKKYTHQGSRVLALAFKSLPDMTVSDARSLHRDEVENGLTFAGFAVFNC 673 (1191)
Q Consensus 594 ~~~~~~~~~~KGapE~I~~~~~~~p~~~~~~~~~~a~~G~RVLalA~k~l~~~~~~~~~~~~r~~~E~dL~flG~l~~~d 673 (1191)
..+.+|+++.+.+.....++.+.+..++++++|+|++++++ |++++|+++++|
T Consensus 404 ------~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~va~---------------------~~~~~G~i~~~D 456 (645)
T 3j08_A 404 ------DGILVGNKRLMEDFGVAVSNEVELALEKLEREAKTAVIVAR---------------------NGRVEGIIAVSD 456 (645)
T ss_dssp ------TTEEEECHHHHHHTTCCCCHHHHHHHHHHHTTTCCCEEEEE---------------------TTEEEEEEEEEC
T ss_pred ------EEEEECCHHHHHhcCCCccHHHHHHHHHHHhcCCeEEEEEE---------------------CCEEEEEEEecC
Confidence 13668999999888778889999999999999999999996 578999999999
Q ss_pred cCCchhHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCcEEEeecCCCceeeecCCCccccccCChHHHhcccc
Q 001010 674 PIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLTD 753 (1191)
Q Consensus 674 ~lK~da~~~I~~L~~agi~vvMiTGDn~~TA~~VA~~~gI~~~~~~il~~~~~~~~~~w~~~d~~~~~~~~~~~~~~~~~ 753 (1191)
++||+++++|++|+++|++++|+|||+..+|.++|+++||.
T Consensus 457 ~l~~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~lgi~--------------------------------------- 497 (645)
T 3j08_A 457 TLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLD--------------------------------------- 497 (645)
T ss_dssp CCTTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCS---------------------------------------
T ss_pred CchhHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCC---------------------------------------
Confidence 99999999999999999999999999999999999999983
Q ss_pred cceEEEechhhhhhcchHHHHhhcCcceEEeecChhhHHHHHHHHhHcCCEEEEEcCCccCHHHHhhCCceEEeccCCCc
Q 001010 754 AHDLCIGGDCFEMLQQTSAVLRVIPYVKVFARVAPEQKELILTTFKAVGRMTLMCGDGTNDVGALKQAHVGVALLNAVPP 833 (1191)
Q Consensus 754 ~~~l~itG~~l~~l~~~~~~~~~l~~~~VfAR~sP~qK~~iV~~Lq~~g~~V~m~GDG~ND~~ALk~AdVGIAl~~~~~e 833 (1191)
.+|+|++|+||.++|+.||+. +.|+|+|||.||++||++|||||||+ ++++
T Consensus 498 ---------------------------~~~~~~~P~~K~~~v~~l~~~-~~v~~vGDg~ND~~al~~A~vgiamg-~g~~ 548 (645)
T 3j08_A 498 ---------------------------LVIAEVLPHQKSEEVKKLQAK-EVVAFVGDGINDAPALAQADLGIAVG-SGSD 548 (645)
T ss_dssp ---------------------------EEECSCCTTCHHHHHHHHTTT-CCEEEEECSSSCHHHHHHSSEEEEEC-CCSC
T ss_pred ---------------------------EEEEeCCHHhHHHHHHHHhhC-CeEEEEeCCHhHHHHHHhCCEEEEeC-CCcH
Confidence 389999999999999999998 89999999999999999999999999 4666
Q ss_pred cccccCCcccccc
Q 001010 834 TQSGNSSSEASKD 846 (1191)
Q Consensus 834 ~~~~asdi~~~~~ 846 (1191)
.+++++|++++++
T Consensus 549 ~a~~~AD~vl~~~ 561 (645)
T 3j08_A 549 VAVESGDIVLIRD 561 (645)
T ss_dssp CSSCCSSSEESSC
T ss_pred HHHHhCCEEEecC
Confidence 7778888777544
|
| >3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.9e-71 Score=696.96 Aligned_cols=479 Identities=21% Similarity=0.248 Sum_probs=385.4
Q ss_pred HHHHHHHHHHHHHhhhhHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc-CCceEEEEECCEEEEEecCCCCCCc
Q 001010 201 PFFVFQVFCVGLWCLDEYWYY--SLFTLFMLFMFESTMAKSRLKTLTEIRRVRV-DNQTIMVHRCGKWVKLAGTDLVPGD 277 (1191)
Q Consensus 201 pf~vfqi~~v~lw~l~~y~~y--sl~~l~m~vv~~~~~~~~~~r~~~~l~~m~~-~~~~v~V~R~g~~~~I~s~eLvpGD 277 (1191)
..|++++++++.|..++|+|| +.++++++.+.+....+.+.|+.+.++++.. .|..++|+|||+|++|+++||+|||
T Consensus 154 ~a~~~s~~~~~~~~~~~~~~~~~~~~i~~~~~ig~~le~~~~~~~~~~i~~l~~l~~~~a~v~r~g~~~~i~~~~l~~GD 233 (723)
T 3j09_A 154 AAFLASVLSTAGVLPREYSFYETSVLLLAFLLLGRTLEARAKSRTGEAIKKLVGLQAKTAVVIRDGKEIAVPVEEVAVGD 233 (723)
T ss_dssp HHHHHHHHHHHTTTTCCCCCCTTHHHHHHHHHHHHHHHHHHHTTCCCTTHHHHHTSCSEEEEEETTEEEEEEGGGCCTTC
T ss_pred HHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeeEEEECCEEEEEEHHHCCCCC
Confidence 456777887777776775444 4444444445555555555554444444422 4789999999999999999999999
Q ss_pred EEEEcCCCCCCCCCceeeeeEEEEecceeeecccccCCCCceecccccCCCCccccccccCCCeeEeeceEEeecCCCCC
Q 001010 278 VVSIGRSSGQTGEDKSVPADMLILGGSAIVNEAILTGESTPQWKVSIMGRETGEKLSARRDKSHVLFGGTKILQHTPDKT 357 (1191)
Q Consensus 278 IV~l~~g~gd~~~~~~VPaD~iLl~G~~~VdES~LTGES~Pv~K~~i~~~~~~~~~~~~~~k~~~lfaGT~vlq~~~~~~ 357 (1191)
+|.|++| ++|||||+|++|++.||||+|||||.|+.|.+ ++.+|+||.+.
T Consensus 234 iv~v~~G-------e~IPaDg~vl~G~~~VdeS~LTGES~pv~K~~----------------g~~v~~Gt~~~------- 283 (723)
T 3j09_A 234 IVIVRPG-------EKIPVDGVVVEGESYVDESMISGEPVPVLKSK----------------GDEVFGATINN------- 283 (723)
T ss_dssp EEEECTT-------CBCCSEEEEEECCEEEECHHHHCCSSCEEECT----------------TCEECTTCEEC-------
T ss_pred EEEECCC-------CEEeeEEEEEECCeEEecccccCCCcceeecC----------------CCeeccceEEe-------
Confidence 9999987 79999999999999999999999999999975 78899999998
Q ss_pred CCCCCCCCcEEEEEEEecccchhhHHHHHhccccccccchhh----hHHHHHHHHHHHHHHhhheeeeecccCCCcchhH
Q 001010 358 FPLKTPDGGCLAVVLRTGFETSQGKLMRTILFSTERVTANSW----ESGLFILFLVVFAVIAAGYVLKKGMEDPTRSKYK 433 (1191)
Q Consensus 358 ~~~~~~~g~~~~vV~~TG~~T~~Gkl~r~i~~~~~~~~~~~~----~~~~fi~~lli~aii~~~~~~~~~~~~~~~~~~~ 433 (1191)
+|.+.++|++||.+|..|++++.+.....+.++.++ .+.+|+.++++++++.+.+|+..+ +.++..
T Consensus 284 ------~g~~~~~v~~~g~~T~l~~i~~lv~~a~~~k~~~~~~~d~~~~~~~~~vl~~a~~~~~~~~~~~----~~~~~~ 353 (723)
T 3j09_A 284 ------TGVLKIRATRVGGETLLAQIVKLVEDAMGSKPPIQRLADKVVAYFIPTVLLVAISAFIYWYFIA----HAPLLF 353 (723)
T ss_dssp ------SSCEEEEEEECGGGSHHHHHHHHHSSSCCSCCHHHHHHHHHHHHHHHHHHHHHHHHHTTSCSST----TCTTCC
T ss_pred ------cCcEEEEEEEecCccHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc----CCcHHH
Confidence 899999999999999999999999877666665444 455666777777777666665432 123445
Q ss_pred HHHHHHHhhhhccCCCcchHHHHHHHHHHHHHHhcCccccCCCcccccCCccEEEecccccccCCceEEEEEeecCCCcc
Q 001010 434 LFLSCSLIITSVIPPELPMELSIAVNTSLIALARRGIFCTEPFRIPFAGKVDMCCFDKTGTLTSDDMEFRGVVGLSNAEL 513 (1191)
Q Consensus 434 ~~l~~i~iit~~vP~~LP~~lslav~~s~~~L~k~~I~~~~p~~i~~~G~vd~icfDKTGTLT~~~l~v~gv~~~~~~~~ 513 (1191)
.+..++.+++++|||+||+++++++..++.+++|+||+|+++.++|.+|++|++|||||||||+|+|++.++...+.
T Consensus 354 ~~~~~i~vlvia~P~aL~la~p~a~~~~~~~~a~~gilvk~~~~lE~lg~v~~i~fDKTGTLT~g~~~v~~~~~~~~--- 430 (723)
T 3j09_A 354 AFTTLIAVLVVACPCAFGLATPTALTVGMGKGAELGILIKNADALEVAEKVTAVIFDKTGTLTKGKPEVTDLVPLNG--- 430 (723)
T ss_dssp SHHHHHHHHHHHSCTTHHHHHHHHHHHHHHHHHTTTCEESSTTHHHHGGGCCEEEEEHHHHTSCSCCEEEEEEESSS---
T ss_pred HHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHCCeEEeChHHHHHhhcCCEEEEcCCCccccCceEEEEEEeCCC---
Confidence 67888999999999999999999999999999999999999999999999999999999999999999999987532
Q ss_pred ccccCCCchHHHHHHhhccceEEeCCcccCChHHHHHHhcccccccCCCccccCCCCCCcccEEEEecCCCCCCcEEEEE
Q 001010 514 EDDMTKVPVRTQEILASCHALVFVDNKLVGDPLEKAALKGIDWSYKSDEKAMPKRGGGNAVQIVQRHHFASHLKRMSVVV 593 (1191)
Q Consensus 514 ~~~~~~~~~~~~~~la~chsl~~~~~~~~GdPle~all~~~~~~~~~~~~~~~~~~~~~~~~il~~~~Fss~~krmsvvv 593 (1191)
...+.....++|.. ...||++.|++++..-.- ... .... +|.+...+ ++..
T Consensus 431 ------~~~~~l~~aa~~e~-------~s~hP~~~Ai~~~a~~~~---~~~----~~~~--------~~~~~~g~-g~~~ 481 (723)
T 3j09_A 431 ------DERELLRLAAIAER-------RSEHPIAEAIVKKALEHG---IEL----GEPE--------KVEVIAGE-GVVA 481 (723)
T ss_dssp ------CHHHHHHHHHHHHT-------TCCSHHHHHHHHHHHHTT---CCC----CSCC--------CCEEETTT-EEEE
T ss_pred ------CHHHHHHHHHHHhc-------cCCCchhHHHHHHHHhcC---CCc----CCcc--------ceEEecCC-ceEE
Confidence 11223333333322 247999999998753110 000 0000 11111111 1211
Q ss_pred EeCCeEEEEEeCcHHHHHHhccCChHHHHHHHHHHHHhcCeeeeEEEEeCCCCChhhhhhccccccccCeEEeeeecccC
Q 001010 594 RVQEEFFAFVKGAPETIQDRLTDLPSSYIETYKKYTHQGSRVLALAFKSLPDMTVSDARSLHRDEVENGLTFAGFAVFNC 673 (1191)
Q Consensus 594 ~~~~~~~~~~KGapE~I~~~~~~~p~~~~~~~~~~a~~G~RVLalA~k~l~~~~~~~~~~~~r~~~E~dL~flG~l~~~d 673 (1191)
..+.+|+++.+.+.....++.+.+.+++++++|+|++++|+ |++++|+++++|
T Consensus 482 ------~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~va~---------------------~~~~~G~i~i~D 534 (723)
T 3j09_A 482 ------DGILVGNKRLMEDFGVAVSNEVELALEKLEREAKTAVIVAR---------------------NGRVEGIIAVSD 534 (723)
T ss_dssp ------TTEEEECHHHHHHTTCCCCHHHHHHHHHHHTTTCEEEEEEE---------------------TTEEEEEEEEEC
T ss_pred ------EEEEECCHHHHHhcCCCccHHHHHHHHHHHhcCCeEEEEEE---------------------CCEEEEEEeecC
Confidence 13668999999888778889999999999999999999995 678999999999
Q ss_pred cCCchhHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCcEEEeecCCCceeeecCCCccccccCChHHHhcccc
Q 001010 674 PIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLTD 753 (1191)
Q Consensus 674 ~lK~da~~~I~~L~~agi~vvMiTGDn~~TA~~VA~~~gI~~~~~~il~~~~~~~~~~w~~~d~~~~~~~~~~~~~~~~~ 753 (1191)
++||+++++|++|+++|++++|+|||+..||.++|+++||.
T Consensus 535 ~~~~~~~~~i~~l~~~Gi~v~~~TGd~~~~a~~ia~~lgi~--------------------------------------- 575 (723)
T 3j09_A 535 TLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLD--------------------------------------- 575 (723)
T ss_dssp CSCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCS---------------------------------------
T ss_pred CcchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCc---------------------------------------
Confidence 99999999999999999999999999999999999999983
Q ss_pred cceEEEechhhhhhcchHHHHhhcCcceEEeecChhhHHHHHHHHhHcCCEEEEEcCCccCHHHHhhCCceEEeccCCCc
Q 001010 754 AHDLCIGGDCFEMLQQTSAVLRVIPYVKVFARVAPEQKELILTTFKAVGRMTLMCGDGTNDVGALKQAHVGVALLNAVPP 833 (1191)
Q Consensus 754 ~~~l~itG~~l~~l~~~~~~~~~l~~~~VfAR~sP~qK~~iV~~Lq~~g~~V~m~GDG~ND~~ALk~AdVGIAl~~~~~e 833 (1191)
.+|+|++|+||..+|+.||+. +.|+|+|||.||++||++|||||||+ ++++
T Consensus 576 ---------------------------~~~~~~~P~~K~~~v~~l~~~-~~v~~vGDg~ND~~al~~A~vgiamg-~g~~ 626 (723)
T 3j09_A 576 ---------------------------LVIAEVLPHQKSEEVKKLQAK-EVVAFVGDGINDAPALAQADLGIAVG-SGSD 626 (723)
T ss_dssp ---------------------------EEECSCCTTCHHHHHHHHTTT-CCEEEEECSSTTHHHHHHSSEEEECC-CCSC
T ss_pred ---------------------------EEEccCCHHHHHHHHHHHhcC-CeEEEEECChhhHHHHhhCCEEEEeC-CCcH
Confidence 389999999999999999998 89999999999999999999999999 4667
Q ss_pred cccccCCcccccc
Q 001010 834 TQSGNSSSEASKD 846 (1191)
Q Consensus 834 ~~~~asdi~~~~~ 846 (1191)
.+++++|++++++
T Consensus 627 ~a~~~AD~vl~~~ 639 (723)
T 3j09_A 627 VAVESGDIVLIRD 639 (723)
T ss_dssp CSSCCSSEECSSC
T ss_pred HHHHhCCEEEeCC
Confidence 7888888877554
|
| >2yj3_A Copper-transporting ATPase; hydrolase, P-type ATPase, COPB, heavy metal translocation; 2.20A {Sulfolobus solfataricus} PDB: 2iye_A 2yj6_A* 2yj5_A* 2yj4_A* | Back alignment and structure |
|---|
Probab=99.85 E-value=2.1e-26 Score=256.83 Aligned_cols=235 Identities=21% Similarity=0.252 Sum_probs=162.2
Q ss_pred HHHHHHHhcCccccCCCcccccCCccEEEecccccccCCceEEEEEeecCCCccccccCCCchHHHHHHhhccceEEeCC
Q 001010 460 TSLIALARRGIFCTEPFRIPFAGKVDMCCFDKTGTLTSDDMEFRGVVGLSNAELEDDMTKVPVRTQEILASCHALVFVDN 539 (1191)
Q Consensus 460 ~s~~~L~k~~I~~~~p~~i~~~G~vd~icfDKTGTLT~~~l~v~gv~~~~~~~~~~~~~~~~~~~~~~la~chsl~~~~~ 539 (1191)
.++.+++|+||+++++..+|.++++|++|||||||||+|++.+..+. +. ..++....++..
T Consensus 4 ~a~~~~~~~gil~k~~~~le~l~~i~~v~fDktGTLT~g~~~v~~~~--~~--------------~~~l~~~~~~e~--- 64 (263)
T 2yj3_A 4 SLYEKMLHKGMIIKNSNVYEKIKEIDTIIFEKTGTLTYGTPIVTQFI--GD--------------SLSLAYAASVEA--- 64 (263)
Confidence 46778999999999999999999999999999999999999998874 11 012222233332
Q ss_pred cccCChHHHHHHhcccccccCCCccccCCCCCCcccEEEEecCCCCCCcEEEEEEeCCeEEEEEeCcHHHHHHhccCChH
Q 001010 540 KLVGDPLEKAALKGIDWSYKSDEKAMPKRGGGNAVQIVQRHHFASHLKRMSVVVRVQEEFFAFVKGAPETIQDRLTDLPS 619 (1191)
Q Consensus 540 ~~~GdPle~all~~~~~~~~~~~~~~~~~~~~~~~~il~~~~Fss~~krmsvvv~~~~~~~~~~KGapE~I~~~~~~~p~ 619 (1191)
.+.||+..|+.+++... . +.....-.|.... ..++-....+. .+..|+++
T Consensus 65 -~s~hp~a~ai~~~~~~~-g--------------~~~~~~~~~~~~~-G~g~~~~~~~~--~~~~G~~~----------- 114 (263)
T 2yj3_A 65 -LSSHPIAKAIVKYAKEQ-G--------------VKILEVKDFKEIS-GIGVRGKISDK--IIEVKKAE----------- 114 (263)
Confidence 24678888887654210 0 0000000000000 00000000000 11112221
Q ss_pred HHHHHHHHHHHhcCeeeeEEEEeCCCCChhhhhhccccccccCeEEeeeecccCcCCchhHHHHHHHHhcCCcEEEEcCC
Q 001010 620 SYIETYKKYTHQGSRVLALAFKSLPDMTVSDARSLHRDEVENGLTFAGFAVFNCPIREDSAKILSELKNSSQDLAMITGD 699 (1191)
Q Consensus 620 ~~~~~~~~~a~~G~RVLalA~k~l~~~~~~~~~~~~r~~~E~dL~flG~l~~~d~lK~da~~~I~~L~~agi~vvMiTGD 699 (1191)
+|.+ +.++ .+-.+.|.+.+.++++|++.++|+.|++.|++++|+|||
T Consensus 115 -----------~~~~-~~~~---------------------~~~~~~~~~~~~~~~~~g~~~~l~~L~~~g~~~~i~T~~ 161 (263)
T 2yj3_A 115 -----------NNND-IAVY---------------------INGEPIASFNISDVPRPNLKDYLEKLKNEGLKIIILSGD 161 (263)
Confidence 2222 2222 344688999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHcCCCCCCcEEEeecCCCceeeecCCCccccccCChHHHhcccccceEEEechhhhhhcchHHHHhhcCc
Q 001010 700 QALTACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLTDAHDLCIGGDCFEMLQQTSAVLRVIPY 779 (1191)
Q Consensus 700 n~~TA~~VA~~~gI~~~~~~il~~~~~~~~~~w~~~d~~~~~~~~~~~~~~~~~~~~l~itG~~l~~l~~~~~~~~~l~~ 779 (1191)
+..++..+++++||.
T Consensus 162 ~~~~~~~~~~~~gl~----------------------------------------------------------------- 176 (263)
T 2yj3_A 162 KEDKVKELSKELNIQ----------------------------------------------------------------- 176 (263)
Confidence 999999999999983
Q ss_pred ceEEeecChhhHHHHHHHHhHcCCEEEEEcCCccCHHHHhhCCceEEeccCCCccccccCCccc
Q 001010 780 VKVFARVAPEQKELILTTFKAVGRMTLMCGDGTNDVGALKQAHVGVALLNAVPPTQSGNSSSEA 843 (1191)
Q Consensus 780 ~~VfAR~sP~qK~~iV~~Lq~~g~~V~m~GDG~ND~~ALk~AdVGIAl~~~~~e~~~~asdi~~ 843 (1191)
.+|+.+.|++|..+++.|+..+..|+|+|||.||++|+++|++||+++++ .+...+.+|+++
T Consensus 177 -~~f~~~~p~~k~~~~~~l~~~~~~~~~VGD~~~D~~aa~~Agv~va~g~~-~~~~~~~ad~v~ 238 (263)
T 2yj3_A 177 -EYYSNLSPEDKVRIIEKLKQNGNKVLMIGDGVNDAAALALADVSVAMGNG-VDISKNVADIIL 238 (263)
Confidence 25666779999999999999999999999999999999999999999853 333333344433
|
| >2hc8_A PACS, cation-transporting ATPase, P-type; copper, COPA, COPB, actuator, transport protein; 1.65A {Archaeoglobus fulgidus} PDB: 2voy_F | Back alignment and structure |
|---|
Probab=99.90 E-value=3e-24 Score=206.77 Aligned_cols=109 Identities=23% Similarity=0.372 Sum_probs=100.4
Q ss_pred HHHHHHhhccCCceEEEEECCEEEEEecCCCCCCcEEEEcCCCCCCCCCceeeeeEEEEecceeeecccccCCCCceecc
Q 001010 243 TLTEIRRVRVDNQTIMVHRCGKWVKLAGTDLVPGDVVSIGRSSGQTGEDKSVPADMLILGGSAIVNEAILTGESTPQWKV 322 (1191)
Q Consensus 243 ~~~~l~~m~~~~~~v~V~R~g~~~~I~s~eLvpGDIV~l~~g~gd~~~~~~VPaD~iLl~G~~~VdES~LTGES~Pv~K~ 322 (1191)
++++|.++. |..++|+|||+|++|++++|+|||+|.|++| ++|||||+|++|++.||||+|||||.|+.|.
T Consensus 2 al~~L~~l~--p~~a~v~r~g~~~~i~~~~l~~GDiv~v~~G-------~~iPaDg~v~~g~~~vdeS~LTGEs~pv~k~ 72 (113)
T 2hc8_A 2 AIKKLVGLQ--AKTAVVIRDGKEIAVPVEEVAVGDIVIVRPG-------EKIPVDGVVVEGESYVDESMISGEPVPVLKS 72 (113)
T ss_dssp HHHHHHHHS--CSEEEEEETTEEEEEEGGGCCTTCEEEECTT-------CBCCSEEEEEECCEEEECHHHHCCSSCEEEC
T ss_pred HHHHHhcCC--CCEEEEEECCEEEEEEHHHCCCCCEEEECCC-------CEEeeeEEEEEceEEEEccccCCCCccEEEC
Confidence 355666665 7889999999999999999999999999987 7999999999999999999999999999998
Q ss_pred cccCCCCccccccccCCCeeEeeceEEeecCCCCCCCCCCCCCcEEEEEEEecccchhhHHHHHhcc
Q 001010 323 SIMGRETGEKLSARRDKSHVLFGGTKILQHTPDKTFPLKTPDGGCLAVVLRTGFETSQGKLMRTILF 389 (1191)
Q Consensus 323 ~i~~~~~~~~~~~~~~k~~~lfaGT~vlq~~~~~~~~~~~~~g~~~~vV~~TG~~T~~Gkl~r~i~~ 389 (1191)
+ ++.+|+||.+. +|.+.++|++||.+|..|++++.+..
T Consensus 73 ~----------------g~~v~aGt~~~-------------~G~~~~~V~~~g~~T~~~~i~~lv~~ 110 (113)
T 2hc8_A 73 K----------------GDEVFGATINN-------------TGVLKIRATRVGGETLLAQIVKLVED 110 (113)
T ss_dssp T----------------TCEECTTCEEC-------------SSCEEEEEEECGGGSHHHHHHHHHHH
T ss_pred C----------------CCEEEeCCEEe-------------eceEEEEEEEecCcCHHHHHHHHHHH
Confidence 5 78899999999 89999999999999999999998754
|
| >2kij_A Copper-transporting ATPase 1; actuator, menkes disease, alternative splicing, ATP-binding, cell membrane, cytoplasm, disease mutation; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.88 E-value=5.1e-23 Score=201.69 Aligned_cols=110 Identities=16% Similarity=0.298 Sum_probs=99.8
Q ss_pred HHHHHHHhhccCCceEEEEECCE------EEEEecCCCCCCcEEEEcCCCCCCCCCceeeeeEEEEecceeeecccccCC
Q 001010 242 KTLTEIRRVRVDNQTIMVHRCGK------WVKLAGTDLVPGDVVSIGRSSGQTGEDKSVPADMLILGGSAIVNEAILTGE 315 (1191)
Q Consensus 242 r~~~~l~~m~~~~~~v~V~R~g~------~~~I~s~eLvpGDIV~l~~g~gd~~~~~~VPaD~iLl~G~~~VdES~LTGE 315 (1191)
+++++|.++. |..++|+|+|+ +++|++++|+|||+|.|++| ++|||||+|++|++.||||+||||
T Consensus 7 ~~l~~L~~l~--p~~a~v~r~g~~~~~~~~~~v~~~~l~~GDiv~v~~G-------~~iPaDg~vi~g~~~vdeS~LTGE 77 (124)
T 2kij_A 7 EALAKLISLQ--ATEATIVTLDSDNILLSEEQVDVELVQRGDIIKVVPG-------GKFPVDGRVIEGHSMVDESLITGE 77 (124)
T ss_dssp CHHHHHHHTC--CSEEEEEECSSSTTCCEEEEEETTTCCTTCEEECCTT-------CBCSSCEEECSCCCEEECTTTTCC
T ss_pred HHHHHHhccC--CCEEEEEECCCCCceeEEEEEeHHHCCCCCEEEECCC-------CEEEeeEEEEEccEEEEeccccCC
Confidence 4566666664 78999999764 78999999999999999987 799999999999999999999999
Q ss_pred CCceecccccCCCCccccccccCCCeeEeeceEEeecCCCCCCCCCCCCCcEEEEEEEecccchhhHHHHHhcc
Q 001010 316 STPQWKVSIMGRETGEKLSARRDKSHVLFGGTKILQHTPDKTFPLKTPDGGCLAVVLRTGFETSQGKLMRTILF 389 (1191)
Q Consensus 316 S~Pv~K~~i~~~~~~~~~~~~~~k~~~lfaGT~vlq~~~~~~~~~~~~~g~~~~vV~~TG~~T~~Gkl~r~i~~ 389 (1191)
|.|+.|.+ ++.+|+||.+. +|.+.+.|++||.+|..|++++.+..
T Consensus 78 s~pv~k~~----------------g~~v~aGt~~~-------------~G~~~~~v~~~g~~T~~~~I~~lv~~ 122 (124)
T 2kij_A 78 AMPVAKKP----------------GSTVIAGSINQ-------------NGSLLICATHVGADTTLSQIVKLVEE 122 (124)
T ss_dssp SSCEECCT----------------TEEECTTCEEE-------------SSCCEEEECSCTTTCHHHHHHHHTTT
T ss_pred CccEEeCC----------------CCEEEcCCEEe-------------eeEEEEEEEEecccCHHHHHHHHHHh
Confidence 99999985 78999999999 89999999999999999999998754
|
| >3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I | Back alignment and structure |
|---|
Probab=99.88 E-value=8.5e-22 Score=222.34 Aligned_cols=243 Identities=24% Similarity=0.277 Sum_probs=185.0
Q ss_pred HHHHHHhcCccccCCCcccccCCccEEEecccccccCCceEEEEEeecCCCccccccCCCchHHHHHHhhccceEEeCCc
Q 001010 461 SLIALARRGIFCTEPFRIPFAGKVDMCCFDKTGTLTSDDMEFRGVVGLSNAELEDDMTKVPVRTQEILASCHALVFVDNK 540 (1191)
Q Consensus 461 s~~~L~k~~I~~~~p~~i~~~G~vd~icfDKTGTLT~~~l~v~gv~~~~~~~~~~~~~~~~~~~~~~la~chsl~~~~~~ 540 (1191)
+..+++|+||+++++..+|.+++++++|||||||||.+.+.+..+...++ . ...++..|+++. .
T Consensus 9 ~~~~~~~~gilik~~~~le~l~~i~~viFD~dGTL~ds~~~~~~~~~~~~----------~--~~~~l~~~~~~e----~ 72 (287)
T 3a1c_A 9 GSRKGAELGILIKNADALEVAEKVTAVIFDKTGTLTKGKPEVTDLVPLNG----------D--ERELLRLAAIAE----R 72 (287)
T ss_dssp -----CCCCEEECSTTHHHHHHHCCEEEEECCCCCBCSCCEEEEEEESSS----------C--HHHHHHHHHHHT----T
T ss_pred hHHHHHHCCEEEeCcHHHHHhhcCCEEEEeCCCCCcCCCEEEEEEEeCCC----------C--HHHHHHHHHHHh----h
Confidence 45688999999999999999999999999999999999999998876543 0 123444555553 3
Q ss_pred ccCChHHHHHHhcccc-cccCCCccccCCCCCCcccEEEEecCCCCCCcEEEEEEeCCeEEEEEeCcHHHHHHhccCChH
Q 001010 541 LVGDPLEKAALKGIDW-SYKSDEKAMPKRGGGNAVQIVQRHHFASHLKRMSVVVRVQEEFFAFVKGAPETIQDRLTDLPS 619 (1191)
Q Consensus 541 ~~GdPle~all~~~~~-~~~~~~~~~~~~~~~~~~~il~~~~Fss~~krmsvvv~~~~~~~~~~KGapE~I~~~~~~~p~ 619 (1191)
...||++.++.+.+.- .+... ..+..+.+. .+++.. . .+.+|+++.+.+.....|+
T Consensus 73 ~s~hp~~~a~~~~~~~~g~~~~-----------~~~~~~~~~------G~~~~~---~---~~~~g~~~~~~~~~~~~~~ 129 (287)
T 3a1c_A 73 RSEHPIAEAIVKKALEHGIELG-----------EPEKVEVIA------GEGVVA---D---GILVGNKRLMEDFGVAVSN 129 (287)
T ss_dssp TCCSHHHHHHHHHHHHTTCCCC-----------CCSCEEEET------TTEEEE---T---TEEEECHHHHHHTTCCCCH
T ss_pred cCCCHHHHHHHHHHHhcCCCcc-----------ccccceeec------CCCeEE---E---EEEECCHHHHHhcCCCccH
Confidence 3579999998876531 11000 000011110 112211 1 2456888877765556666
Q ss_pred HHHHHHHHHHHhcCeeeeEEEEeCCCCChhhhhhccccccccCeEEeeeecccCcCCchhHHHHHHHHhcCCcEEEEcCC
Q 001010 620 SYIETYKKYTHQGSRVLALAFKSLPDMTVSDARSLHRDEVENGLTFAGFAVFNCPIREDSAKILSELKNSSQDLAMITGD 699 (1191)
Q Consensus 620 ~~~~~~~~~a~~G~RVLalA~k~l~~~~~~~~~~~~r~~~E~dL~flG~l~~~d~lK~da~~~I~~L~~agi~vvMiTGD 699 (1191)
.+++..+.+..+|.+++++++ |..+.|.+...++++|++.++|+.|++.|+++.++||+
T Consensus 130 ~~~~~~~~~~~~g~~~i~~~~---------------------d~~~~~~~~~~~~~~~g~~~~l~~L~~~g~~~~i~T~~ 188 (287)
T 3a1c_A 130 EVELALEKLEREAKTAVIVAR---------------------NGRVEGIIAVSDTLKESAKPAVQELKRMGIKVGMITGD 188 (287)
T ss_dssp HHHHHHHHHHHTTCEEEEEEE---------------------TTEEEEEEEEECCBCTTHHHHHHHHHHTTCEEEEECSS
T ss_pred HHHHHHHHHHhCCCeEEEEEE---------------------CCEEEEEEEeccccchhHHHHHHHHHHCCCeEEEEeCC
Confidence 777788889999999999986 34688888899999999999999999999999999999
Q ss_pred CHHHHHHHHHHcCCCCCCcEEEeecCCCceeeecCCCccccccCChHHHhcccccceEEEechhhhhhcchHHHHhhcCc
Q 001010 700 QALTACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLTDAHDLCIGGDCFEMLQQTSAVLRVIPY 779 (1191)
Q Consensus 700 n~~TA~~VA~~~gI~~~~~~il~~~~~~~~~~w~~~d~~~~~~~~~~~~~~~~~~~~l~itG~~l~~l~~~~~~~~~l~~ 779 (1191)
+...+..+++.+|+.
T Consensus 189 ~~~~~~~~l~~~gl~----------------------------------------------------------------- 203 (287)
T 3a1c_A 189 NWRSAEAISRELNLD----------------------------------------------------------------- 203 (287)
T ss_dssp CHHHHHHHHHHHTCS-----------------------------------------------------------------
T ss_pred CHHHHHHHHHHhCCc-----------------------------------------------------------------
Confidence 999999999999983
Q ss_pred ceEEeecChhhHHHHHHHHhHcCCEEEEEcCCccCHHHHhhCCceEEeccC
Q 001010 780 VKVFARVAPEQKELILTTFKAVGRMTLMCGDGTNDVGALKQAHVGVALLNA 830 (1191)
Q Consensus 780 ~~VfAR~sP~qK~~iV~~Lq~~g~~V~m~GDG~ND~~ALk~AdVGIAl~~~ 830 (1191)
.+|..+.|+.|...++.|+.. ..++|+||+.||+.|++.|++||+++++
T Consensus 204 -~~f~~i~~~~K~~~~~~l~~~-~~~~~vGDs~~Di~~a~~ag~~v~~~~~ 252 (287)
T 3a1c_A 204 -LVIAEVLPHQKSEEVKKLQAK-EVVAFVGDGINDAPALAQADLGIAVGSG 252 (287)
T ss_dssp -EEECSCCTTCHHHHHHHHTTT-CCEEEEECTTTCHHHHHHSSEEEEECCC
T ss_pred -eeeeecChHHHHHHHHHHhcC-CeEEEEECCHHHHHHHHHCCeeEEeCCC
Confidence 255666689999999999888 8999999999999999999999999854
|
| >3skx_A Copper-exporting P-type ATPase B; P1B-ATPase, ATP binding domain, copper(II) transporter, MEMB protein, hydrolase; 1.59A {Archaeoglobus fulgidus} PDB: 3sky_A* | Back alignment and structure |
|---|
Probab=99.78 E-value=8.3e-18 Score=187.26 Aligned_cols=245 Identities=24% Similarity=0.271 Sum_probs=173.5
Q ss_pred ccCCCcccccCCccEEEecccccccCCceEEEEEeecCCCccccccCCCchHHHHHHhhccceEEeCCcccCChHHHHHH
Q 001010 472 CTEPFRIPFAGKVDMCCFDKTGTLTSDDMEFRGVVGLSNAELEDDMTKVPVRTQEILASCHALVFVDNKLVGDPLEKAAL 551 (1191)
Q Consensus 472 ~~~p~~i~~~G~vd~icfDKTGTLT~~~l~v~gv~~~~~~~~~~~~~~~~~~~~~~la~chsl~~~~~~~~GdPle~all 551 (1191)
++++..++.+++++.+|||+|||||.|++.+.++...++ ...+...+++.+.. ...+|+..++.
T Consensus 1 ~k~~~~~e~~~~ik~i~FD~DGTL~d~~~~v~~~~~~~~---------~~~~~~~~~~~~~~-------~s~~~~~~a~~ 64 (280)
T 3skx_A 1 MRDRQAFERAKDLQAVIFDKTGTLTEGRFGVTDIVGFNH---------SEDELLQIAASLEA-------RSEHPIAAAIV 64 (280)
T ss_dssp ----CHHHHGGGCCEEEEECCCCCEEEEEEEEEEEESSS---------CHHHHHHHHHHHHT-------TCCSHHHHHHH
T ss_pred CCChHHHHHhcCCCEEEEeCCCcCCCCcEEEEEEEecCC---------CHHHHHHHHHHhhc-------cCCCHHHHHHH
Confidence 467888999999999999999999999999999987643 11223333333322 13467777766
Q ss_pred hcccccccCCCccccCCCCCCcccEEEEecCCCCCCcEEEEEEeCCeEEEEEeCcHHHHHHhccCChHHHHHHHHHHHHh
Q 001010 552 KGIDWSYKSDEKAMPKRGGGNAVQIVQRHHFASHLKRMSVVVRVQEEFFAFVKGAPETIQDRLTDLPSSYIETYKKYTHQ 631 (1191)
Q Consensus 552 ~~~~~~~~~~~~~~~~~~~~~~~~il~~~~Fss~~krmsvvv~~~~~~~~~~KGapE~I~~~~~~~p~~~~~~~~~~a~~ 631 (1191)
+.+.-. ... ......++.++ ..++....++. .+..|+++.+.+.....++ ....+..+
T Consensus 65 ~~~~~~-g~~---------~~~~~~~~~~~------g~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~----~~~~~~~~ 122 (280)
T 3skx_A 65 EEAEKR-GFG---------LTEVEEFRAIP------GKGVEGIVNGR--RYMVVSPGYIRELGIKTDE----SVEKLKQQ 122 (280)
T ss_dssp HHHHHT-TCC---------CCCCEEEEEET------TTEEEEEETTE--EEEEECHHHHHHTTCCCCT----THHHHHTT
T ss_pred HHHHhc-CCC---------CCCccceeecC------CCEEEEEECCE--EEEEecHHHHHHcCCCchH----HHHHHHhC
Confidence 654210 000 00111122221 11222223333 3345888888877655543 34566778
Q ss_pred cCeeeeEEEEeCCCCChhhhhhccccccccCeEEeeeecccCcCCchhHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHc
Q 001010 632 GSRVLALAFKSLPDMTVSDARSLHRDEVENGLTFAGFAVFNCPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQV 711 (1191)
Q Consensus 632 G~RVLalA~k~l~~~~~~~~~~~~r~~~E~dL~flG~l~~~d~lK~da~~~I~~L~~agi~vvMiTGDn~~TA~~VA~~~ 711 (1191)
+.+++.+++ +..++|.+.+.++++|++.++++.|++.|+++.++||++...+..+++++
T Consensus 123 ~~~~~~~~~---------------------~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~ 181 (280)
T 3skx_A 123 GKTVVFILK---------------------NGEVSGVIALADRIRPESREAISKLKAIGIKCMMLTGDNRFVAKWVAEEL 181 (280)
T ss_dssp TCEEEEEEE---------------------TTEEEEEEEEEEEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHH
T ss_pred CCeEEEEEE---------------------CCEEEEEEEecCCCCHhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHc
Confidence 888877764 44688999999999999999999999999999999999999999999999
Q ss_pred CCCCCCcEEEeecCCCceeeecCCCccccccCChHHHhcccccceEEEechhhhhhcchHHHHhhcCcceEEeecChhhH
Q 001010 712 HIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLTDAHDLCIGGDCFEMLQQTSAVLRVIPYVKVFARVAPEQK 791 (1191)
Q Consensus 712 gI~~~~~~il~~~~~~~~~~w~~~d~~~~~~~~~~~~~~~~~~~~l~itG~~l~~l~~~~~~~~~l~~~~VfAR~sP~qK 791 (1191)
|+. ..|..+.|.+|
T Consensus 182 gl~------------------------------------------------------------------~~f~~~~~~~k 195 (280)
T 3skx_A 182 GLD------------------------------------------------------------------DYFAEVLPHEK 195 (280)
T ss_dssp TCS------------------------------------------------------------------EEECSCCGGGH
T ss_pred CCh------------------------------------------------------------------hHhHhcCHHHH
Confidence 984 26677789999
Q ss_pred HHHHHHHhHcCCEEEEEcCCccCHHHHhhCCceEEeccCCCccccccCCccc
Q 001010 792 ELILTTFKAVGRMTLMCGDGTNDVGALKQAHVGVALLNAVPPTQSGNSSSEA 843 (1191)
Q Consensus 792 ~~iV~~Lq~~g~~V~m~GDG~ND~~ALk~AdVGIAl~~~~~e~~~~asdi~~ 843 (1191)
...++.+.+.. .++|+|||.||+.|+++|++||+|+++.++.. +.++.+.
T Consensus 196 ~~~~k~~~~~~-~~~~vGD~~nDi~~~~~Ag~~va~~~~~~~~~-~~a~~~~ 245 (280)
T 3skx_A 196 AEKVKEVQQKY-VTAMVGDGVNDAPALAQADVGIAIGAGTDVAV-ETADIVL 245 (280)
T ss_dssp HHHHHHHHTTS-CEEEEECTTTTHHHHHHSSEEEECSCCSSSCC-CSSSEEC
T ss_pred HHHHHHHHhcC-CEEEEeCCchhHHHHHhCCceEEecCCcHHHH-hhCCEEE
Confidence 99999998876 56999999999999999999999998665544 4455554
|
| >4fe3_A Cytosolic 5'-nucleotidase 3; substrate complex, HAD-like, protein binding; HET: U5P; 1.74A {Mus musculus} PDB: 2g09_A* 2bdu_A* 2g08_A 2g06_A* 2g0a_A* 2q4t_A* 2g07_A* 2jga_A 2vkq_A 2cn1_A | Back alignment and structure |
|---|
Probab=99.75 E-value=7e-20 Score=207.68 Aligned_cols=141 Identities=10% Similarity=0.075 Sum_probs=108.3
Q ss_pred ccCcCCchhHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCcEEEeecCCCceeeecCCCccccccCChHHHhc
Q 001010 671 FNCPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEG 750 (1191)
Q Consensus 671 ~~d~lK~da~~~I~~L~~agi~vvMiTGDn~~TA~~VA~~~gI~~~~~~il~~~~~~~~~~w~~~d~~~~~~~~~~~~~~ 750 (1191)
...++||+++++++.|+++|++++|+|||+..++.++|+++|+...+..+.... +.+. ++
T Consensus 138 ~~i~l~~g~~e~i~~l~~~gi~v~ivSgg~~~~i~~i~~~~g~~~~~~~i~~n~-----l~~~--~~------------- 197 (297)
T 4fe3_A 138 SDVMLKEGYENFFGKLQQHGIPVFIFSAGIGDVLEEVIRQAGVYHSNVKVVSNF-----MDFD--EN------------- 197 (297)
T ss_dssp SCCCBCBTHHHHHHHHHHTTCCEEEEEEEEHHHHHHHHHHTTCCCTTEEEEEEC-----EEEC--TT-------------
T ss_pred cCCCCCCcHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHHHcCCCcccceEEeee-----EEEc--cc-------------
Confidence 357999999999999999999999999999999999999999975544443210 0000 00
Q ss_pred ccccceEEEechhhhhhcchHHHHhhcCcceEEeecChhhHHHHHHHHhHcCCEEEEEcCCccCHHHHh---hCCceEEe
Q 001010 751 LTDAHDLCIGGDCFEMLQQTSAVLRVIPYVKVFARVAPEQKELILTTFKAVGRMTLMCGDGTNDVGALK---QAHVGVAL 827 (1191)
Q Consensus 751 ~~~~~~l~itG~~l~~l~~~~~~~~~l~~~~VfAR~sP~qK~~iV~~Lq~~g~~V~m~GDG~ND~~ALk---~AdVGIAl 827 (1191)
.....+.| +...++++..|.+|...+..+++.|+.|+|+|||+||+||+| +|||||||
T Consensus 198 ---~~~~~~~~----------------~~i~~~~k~~~~~k~~~~~~~~~~~~~v~~vGDGiNDa~m~k~l~~advgiai 258 (297)
T 4fe3_A 198 ---GVLKGFKG----------------ELIHVFNKHDGALKNTDYFSQLKDNSNIILLGDSQGDLRMADGVANVEHILKI 258 (297)
T ss_dssp ---SBEEEECS----------------SCCCTTCHHHHHHTCHHHHHHTTTCCEEEEEESSGGGGGTTTTCSCCSEEEEE
T ss_pred ---ceeEeccc----------------cccchhhcccHHHHHHHHHHhhccCCEEEEEeCcHHHHHHHhCccccCeEEEE
Confidence 00000111 123478899999999999999999999999999999999955 99999999
Q ss_pred ccC------CCccccccCCcccccccchh
Q 001010 828 LNA------VPPTQSGNSSSEASKDENTK 850 (1191)
Q Consensus 828 ~~~------~~e~~~~asdi~~~~~~~~~ 850 (1191)
|-. +.+..++++|+++++|++..
T Consensus 259 Gfl~~~v~~~~d~~~e~~Divl~~d~~~~ 287 (297)
T 4fe3_A 259 GYLNDRVDELLEKYMDSYDIVLVKEESLE 287 (297)
T ss_dssp EEECSSHHHHHHHHHHHSSEEEETCCBCH
T ss_pred EecchhHHHhHHHHHhhCCEEEECCCChH
Confidence 943 34446899999999997653
|
| >3gwi_A Magnesium-transporting ATPase, P-type 1; P-type ATPase, nucleotide binding, ATP binding, MGTA, membra protein, cell inner membrane; 1.60A {Escherichia coli} | Back alignment and structure |
|---|
Probab=99.62 E-value=1.1e-15 Score=158.22 Aligned_cols=120 Identities=28% Similarity=0.300 Sum_probs=93.8
Q ss_pred cCChHHHHHHhcccccccCCCccccCCCCCCcccEEEEecCCCCCCcEEEEEEeC-CeEEEEEeCcHHHHHHhccCC---
Q 001010 542 VGDPLEKAALKGIDWSYKSDEKAMPKRGGGNAVQIVQRHHFASHLKRMSVVVRVQ-EEFFAFVKGAPETIQDRLTDL--- 617 (1191)
Q Consensus 542 ~GdPle~all~~~~~~~~~~~~~~~~~~~~~~~~il~~~~Fss~~krmsvvv~~~-~~~~~~~KGapE~I~~~~~~~--- 617 (1191)
.+||+|.|++++....- . ......+++++.+||+|++|||||+++.. +++++++|||||.|+++|..+
T Consensus 32 ~~n~~d~Ail~~~~~~~-----~---~~~~~~~~~~~eiPFds~rKrmsvv~~~~~g~~~l~~KGApE~IL~~C~~~~~~ 103 (170)
T 3gwi_A 32 LKNLLDTAVLEGTDEES-----A---RSLASRWQKIDEIPFDFERRRMSVVVAENTEHHQLVCKGALQEILNVCSQVRHN 103 (170)
T ss_dssp CCCHHHHHHHHTSCHHH-----H---HHHHHHSEEEEEECCCTTTCEEEEEEESSSSEEEEEEEECHHHHHTTEEEEEET
T ss_pred CCChHHHHHHHHHHhcC-----h---hhhhhcCeEEeeEecCcccCcEEEEEEeCCCCEEEEEcCCcHHHHHHhHHHhcC
Confidence 48999999999764210 0 00013578999999999999999999864 578899999999999999632
Q ss_pred ----------hHHHHHHHHHHHHhcCeeeeEEEEeCCCCChhhhhhccccccccCeEEeeeecccCc
Q 001010 618 ----------PSSYIETYKKYTHQGSRVLALAFKSLPDMTVSDARSLHRDEVENGLTFAGFAVFNCP 674 (1191)
Q Consensus 618 ----------p~~~~~~~~~~a~~G~RVLalA~k~l~~~~~~~~~~~~r~~~E~dL~flG~l~~~d~ 674 (1191)
.+.+.+.++.|+++|+||||+|||.++.... ... .+.|+||+|+|+++|-|.
T Consensus 104 g~~~~l~~~~~~~i~~~~~~la~~GlRvLavA~k~~~~~~~----~~~-~~~E~~L~f~G~~g~~~~ 165 (170)
T 3gwi_A 104 GEIVPLDDIMLRKIKRVTDTLNRQGLRVVAVATKYLPAREG----DYQ-RADESDLILEGYIAFLDH 165 (170)
T ss_dssp TEEEECCHHHHHHHHHHHHHHHHTTCEEEEEEEEEEECCSS----CCC-GGGSCSEEEEEEEEEEC-
T ss_pred CCcccCCHHHHHHHHHHHHHHHhCCCEEEEEEEEECCCCcc----ccC-ccccCCcEEEehhccccc
Confidence 3567888999999999999999999964321 122 346999999999999774
|
| >3n07_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; structural genomics, phosphatase, PSI-2, protein structure initiative; HET: MSE; 1.76A {Vibrio cholerae} | Back alignment and structure |
|---|
Probab=98.62 E-value=1.7e-08 Score=106.83 Aligned_cols=96 Identities=15% Similarity=0.141 Sum_probs=73.4
Q ss_pred HHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCcEEEeecCCCceeeecCCCccccccCChHHHhcccccceEEEe
Q 001010 681 KILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLTDAHDLCIG 760 (1191)
Q Consensus 681 ~~I~~L~~agi~vvMiTGDn~~TA~~VA~~~gI~~~~~~il~~~~~~~~~~w~~~d~~~~~~~~~~~~~~~~~~~~l~it 760 (1191)
..|+.|++.|+++.++||++...+..+++++||..
T Consensus 59 ~~l~~L~~~G~~~~ivT~~~~~~~~~~l~~lgi~~--------------------------------------------- 93 (195)
T 3n07_A 59 YGVKALMNAGIEIAIITGRRSQIVENRMKALGISL--------------------------------------------- 93 (195)
T ss_dssp HHHHHHHHTTCEEEEECSSCCHHHHHHHHHTTCCE---------------------------------------------
T ss_pred HHHHHHHHCCCEEEEEECcCHHHHHHHHHHcCCcE---------------------------------------------
Confidence 35999999999999999999999999999999841
Q ss_pred chhhhhhcchHHHHhhcCcceEEeecChhhHHHHHHHHhH-c---CCEEEEEcCCccCHHHHhhCCceEEeccCCCcccc
Q 001010 761 GDCFEMLQQTSAVLRVIPYVKVFARVAPEQKELILTTFKA-V---GRMTLMCGDGTNDVGALKQAHVGVALLNAVPPTQS 836 (1191)
Q Consensus 761 G~~l~~l~~~~~~~~~l~~~~VfAR~sP~qK~~iV~~Lq~-~---g~~V~m~GDG~ND~~ALk~AdVGIAl~~~~~e~~~ 836 (1191)
+|... +.|...++.+.+ . ...++|+||+.||.+|+++|++|++++++.++. +
T Consensus 94 ---------------------~~~~~--k~k~~~~~~~~~~~~~~~~~~~~vGD~~nDi~~~~~ag~~va~~na~~~~-~ 149 (195)
T 3n07_A 94 ---------------------IYQGQ--DDKVQAYYDICQKLAIAPEQTGYIGDDLIDWPVMEKVALRVCVADGHPLL-A 149 (195)
T ss_dssp ---------------------EECSC--SSHHHHHHHHHHHHCCCGGGEEEEESSGGGHHHHTTSSEEEECTTSCHHH-H
T ss_pred ---------------------EeeCC--CCcHHHHHHHHHHhCCCHHHEEEEcCCHHHHHHHHHCCCEEEECChHHHH-H
Confidence 22222 345555555443 2 357999999999999999999999999776554 4
Q ss_pred ccCCccccc
Q 001010 837 GNSSSEASK 845 (1191)
Q Consensus 837 ~asdi~~~~ 845 (1191)
+.++.+..+
T Consensus 150 ~~ad~v~~~ 158 (195)
T 3n07_A 150 QRANYVTHI 158 (195)
T ss_dssp HHCSEECSS
T ss_pred HhCCEEEcC
Confidence 455555433
|
| >3ij5_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; IDP022 hydrolase, lipopolysaccharide biosynthesis, magnesium, STRU genomics; 1.95A {Yersinia pestis} | Back alignment and structure |
|---|
Probab=98.60 E-value=7.2e-08 Score=103.31 Aligned_cols=96 Identities=21% Similarity=0.161 Sum_probs=76.6
Q ss_pred HHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCcEEEeecCCCceeeecCCCccccccCChHHHhcccccceEEEec
Q 001010 682 ILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLTDAHDLCIGG 761 (1191)
Q Consensus 682 ~I~~L~~agi~vvMiTGDn~~TA~~VA~~~gI~~~~~~il~~~~~~~~~~w~~~d~~~~~~~~~~~~~~~~~~~~l~itG 761 (1191)
+|+.|+++|+++.++||++...+..+++++||.
T Consensus 84 ~L~~L~~~G~~l~I~T~~~~~~~~~~l~~lgi~----------------------------------------------- 116 (211)
T 3ij5_A 84 GIRCLITSDIDVAIITGRRAKLLEDRANTLGIT----------------------------------------------- 116 (211)
T ss_dssp HHHHHHHTTCEEEEECSSCCHHHHHHHHHHTCC-----------------------------------------------
T ss_pred HHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCc-----------------------------------------------
Confidence 999999999999999999999999999999984
Q ss_pred hhhhhhcchHHHHhhcCcceEEeecChhhHHHHHHHHhHc----CCEEEEEcCCccCHHHHhhCCceEEeccCCCccccc
Q 001010 762 DCFEMLQQTSAVLRVIPYVKVFARVAPEQKELILTTFKAV----GRMTLMCGDGTNDVGALKQAHVGVALLNAVPPTQSG 837 (1191)
Q Consensus 762 ~~l~~l~~~~~~~~~l~~~~VfAR~sP~qK~~iV~~Lq~~----g~~V~m~GDG~ND~~ALk~AdVGIAl~~~~~e~~~~ 837 (1191)
.+|... +.|...++.+.+. ...|+|+||+.||++|+++|++|++++++.++ .++
T Consensus 117 -------------------~~f~~~--k~K~~~l~~~~~~lg~~~~~~~~vGDs~nDi~~~~~ag~~~a~~~~~~~-~~~ 174 (211)
T 3ij5_A 117 -------------------HLYQGQ--SDKLVAYHELLATLQCQPEQVAYIGDDLIDWPVMAQVGLSVAVADAHPL-LLP 174 (211)
T ss_dssp -------------------EEECSC--SSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHTTSSEEEECTTSCTT-TGG
T ss_pred -------------------hhhccc--CChHHHHHHHHHHcCcCcceEEEEcCCHHHHHHHHHCCCEEEeCCccHH-HHh
Confidence 133333 4567777666553 46799999999999999999999999976544 455
Q ss_pred cCCcccccc
Q 001010 838 NSSSEASKD 846 (1191)
Q Consensus 838 asdi~~~~~ 846 (1191)
.+|++..+.
T Consensus 175 ~Ad~v~~~~ 183 (211)
T 3ij5_A 175 KAHYVTRIK 183 (211)
T ss_dssp GSSEECSSC
T ss_pred hCCEEEeCC
Confidence 566665433
|
| >3mn1_A Probable YRBI family phosphatase; structural genomics, PSI, protein structure initiative, NYSG phosphatase; 1.80A {Pseudomonas syringae PV} PDB: 3nrj_A | Back alignment and structure |
|---|
Probab=98.58 E-value=6.3e-08 Score=101.80 Aligned_cols=96 Identities=20% Similarity=0.208 Sum_probs=75.4
Q ss_pred HHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCcEEEeecCCCceeeecCCCccccccCChHHHhcccccceEEEec
Q 001010 682 ILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLTDAHDLCIGG 761 (1191)
Q Consensus 682 ~I~~L~~agi~vvMiTGDn~~TA~~VA~~~gI~~~~~~il~~~~~~~~~~w~~~d~~~~~~~~~~~~~~~~~~~~l~itG 761 (1191)
+|+.|++.|+++.++||++...+..+++++|+..
T Consensus 54 ~l~~L~~~g~~~~i~T~~~~~~~~~~~~~lgl~~---------------------------------------------- 87 (189)
T 3mn1_A 54 GIKMLIASGVTTAIISGRKTAIVERRAKSLGIEH---------------------------------------------- 87 (189)
T ss_dssp HHHHHHHTTCEEEEECSSCCHHHHHHHHHHTCSE----------------------------------------------
T ss_pred HHHHHHHCCCEEEEEECcChHHHHHHHHHcCCHH----------------------------------------------
Confidence 9999999999999999999999999999999841
Q ss_pred hhhhhhcchHHHHhhcCcceEEeecChhhHHHHHHHHhHc----CCEEEEEcCCccCHHHHhhCCceEEeccCCCccccc
Q 001010 762 DCFEMLQQTSAVLRVIPYVKVFARVAPEQKELILTTFKAV----GRMTLMCGDGTNDVGALKQAHVGVALLNAVPPTQSG 837 (1191)
Q Consensus 762 ~~l~~l~~~~~~~~~l~~~~VfAR~sP~qK~~iV~~Lq~~----g~~V~m~GDG~ND~~ALk~AdVGIAl~~~~~e~~~~ 837 (1191)
+|... .+|...++.+.+. ...++|+||+.||++|++.|++|++++++.++ .++
T Consensus 88 --------------------~f~~~--~~K~~~~~~~~~~~g~~~~~~~~vGD~~nDi~~~~~ag~~~~~~~~~~~-~~~ 144 (189)
T 3mn1_A 88 --------------------LFQGR--EDKLVVLDKLLAELQLGYEQVAYLGDDLPDLPVIRRVGLGMAVANAASF-VRE 144 (189)
T ss_dssp --------------------EECSC--SCHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHH-HHH
T ss_pred --------------------HhcCc--CChHHHHHHHHHHcCCChhHEEEECCCHHHHHHHHHCCCeEEeCCccHH-HHH
Confidence 22222 5566666665543 35799999999999999999999999976544 445
Q ss_pred cCCcccccc
Q 001010 838 NSSSEASKD 846 (1191)
Q Consensus 838 asdi~~~~~ 846 (1191)
.++++..++
T Consensus 145 ~ad~v~~~~ 153 (189)
T 3mn1_A 145 HAHGITRAQ 153 (189)
T ss_dssp TSSEECSSC
T ss_pred hCCEEecCC
Confidence 566665443
|
| >3ewi_A N-acylneuraminate cytidylyltransferase; beta barrel, HAD-like, rossmannoid fold, nucleotidyltransferase, nucleus; 1.90A {Mus musculus} | Back alignment and structure |
|---|
Probab=98.52 E-value=6.1e-08 Score=100.01 Aligned_cols=105 Identities=12% Similarity=0.043 Sum_probs=76.6
Q ss_pred CeEEeeeecccCcCCchhHHHHHHHHhcCCcEEEEcCCCHHHHHHHHH--HcCCCCCCcEEEeecCCCceeeecCCCccc
Q 001010 662 GLTFAGFAVFNCPIREDSAKILSELKNSSQDLAMITGDQALTACYVAS--QVHIVTKPVLILCPVKNGKVYEWVSPDETE 739 (1191)
Q Consensus 662 dL~flG~l~~~d~lK~da~~~I~~L~~agi~vvMiTGDn~~TA~~VA~--~~gI~~~~~~il~~~~~~~~~~w~~~d~~~ 739 (1191)
+...++.+.++|. .+|+.|++.|+++.|+||+ ..+..+++ ++||.
T Consensus 30 ~g~~~~~f~~~D~------~~L~~Lk~~Gi~~~I~Tg~--~~~~~~l~~l~lgi~------------------------- 76 (168)
T 3ewi_A 30 DQKEIISYDVKDA------IGISLLKKSGIEVRLISER--ACSKQTLSALKLDCK------------------------- 76 (168)
T ss_dssp SCCCEEEEEHHHH------HHHHHHHHTTCEEEEECSS--CCCHHHHHTTCCCCC-------------------------
T ss_pred CCCEEEEEecCcH------HHHHHHHHCCCEEEEEeCc--HHHHHHHHHhCCCcE-------------------------
Confidence 3345555555555 3899999999999999999 67778888 55551
Q ss_pred cccCChHHHhcccccceEEEechhhhhhcchHHHHhhcCcceEEeecChhhHHHHHHHHhHc-C---CEEEEEcCCccCH
Q 001010 740 KIQYSEKEVEGLTDAHDLCIGGDCFEMLQQTSAVLRVIPYVKVFARVAPEQKELILTTFKAV-G---RMTLMCGDGTNDV 815 (1191)
Q Consensus 740 ~~~~~~~~~~~~~~~~~l~itG~~l~~l~~~~~~~~~l~~~~VfAR~sP~qK~~iV~~Lq~~-g---~~V~m~GDG~ND~ 815 (1191)
+|. .+++|...++.+.+. | ..++|+||+.||.
T Consensus 77 ------------------------------------------~~~--g~~~K~~~l~~~~~~~gi~~~~~~~vGD~~nDi 112 (168)
T 3ewi_A 77 ------------------------------------------TEV--SVSDKLATVDEWRKEMGLCWKEVAYLGNEVSDE 112 (168)
T ss_dssp ------------------------------------------EEC--SCSCHHHHHHHHHHHTTCCGGGEEEECCSGGGH
T ss_pred ------------------------------------------EEE--CCCChHHHHHHHHHHcCcChHHEEEEeCCHhHH
Confidence 111 134577777766553 3 4799999999999
Q ss_pred HHHhhCCceEEeccCCCccccccCCcccc
Q 001010 816 GALKQAHVGVALLNAVPPTQSGNSSSEAS 844 (1191)
Q Consensus 816 ~ALk~AdVGIAl~~~~~e~~~~asdi~~~ 844 (1191)
+|++.|+++++|.++.+++ ++.++++..
T Consensus 113 ~~~~~ag~~~a~~na~~~~-k~~Ad~v~~ 140 (168)
T 3ewi_A 113 ECLKRVGLSAVPADACSGA-QKAVGYICK 140 (168)
T ss_dssp HHHHHSSEEEECTTCCHHH-HTTCSEECS
T ss_pred HHHHHCCCEEEeCChhHHH-HHhCCEEeC
Confidence 9999999999999876554 445555553
|
| >1k1e_A Deoxy-D-mannose-octulosonate 8-phosphate phosphat; structural genomics, KDO 8-P phosphatase, structure function project, S2F; HET: MES; 1.67A {Haemophilus influenzae RD} SCOP: c.108.1.5 PDB: 1j8d_A* | Back alignment and structure |
|---|
Probab=98.50 E-value=2e-07 Score=96.94 Aligned_cols=103 Identities=16% Similarity=0.123 Sum_probs=78.2
Q ss_pred CCchhHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCcEEEeecCCCceeeecCCCccccccCChHHHhccccc
Q 001010 675 IREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLTDA 754 (1191)
Q Consensus 675 lK~da~~~I~~L~~agi~vvMiTGDn~~TA~~VA~~~gI~~~~~~il~~~~~~~~~~w~~~d~~~~~~~~~~~~~~~~~~ 754 (1191)
+.+++.++|+.|++.|++++++||++...+..+++++|+..
T Consensus 36 ~~~~~~~~l~~L~~~G~~~~i~Tg~~~~~~~~~~~~lgl~~--------------------------------------- 76 (180)
T 1k1e_A 36 FHVRDGLGIKMLMDADIQVAVLSGRDSPILRRRIADLGIKL--------------------------------------- 76 (180)
T ss_dssp EEHHHHHHHHHHHHTTCEEEEEESCCCHHHHHHHHHHTCCE---------------------------------------
T ss_pred eccchHHHHHHHHHCCCeEEEEeCCCcHHHHHHHHHcCCce---------------------------------------
Confidence 34567899999999999999999999999999999999841
Q ss_pred ceEEEechhhhhhcchHHHHhhcCcceEEeecChhhHHHHHHHHh-HcC---CEEEEEcCCccCHHHHhhCCceEEeccC
Q 001010 755 HDLCIGGDCFEMLQQTSAVLRVIPYVKVFARVAPEQKELILTTFK-AVG---RMTLMCGDGTNDVGALKQAHVGVALLNA 830 (1191)
Q Consensus 755 ~~l~itG~~l~~l~~~~~~~~~l~~~~VfAR~sP~qK~~iV~~Lq-~~g---~~V~m~GDG~ND~~ALk~AdVGIAl~~~ 830 (1191)
+|... ..|...++.+. +.| ..|+|+||+.||++|++.|++++++.++
T Consensus 77 ---------------------------~~~~~--k~k~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~~~~ag~~~~~~~~ 127 (180)
T 1k1e_A 77 ---------------------------FFLGK--LEKETACFDLMKQAGVTAEQTAYIGDDSVDLPAFAACGTSFAVADA 127 (180)
T ss_dssp ---------------------------EEESC--SCHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTS
T ss_pred ---------------------------eecCC--CCcHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCCeEEeCCc
Confidence 11111 34556555443 334 5799999999999999999999999876
Q ss_pred CCccccccCCcccccc
Q 001010 831 VPPTQSGNSSSEASKD 846 (1191)
Q Consensus 831 ~~e~~~~asdi~~~~~ 846 (1191)
.++ .++.++.+..+.
T Consensus 128 ~~~-~~~~ad~v~~~~ 142 (180)
T 1k1e_A 128 PIY-VKNAVDHVLSTH 142 (180)
T ss_dssp CHH-HHTTSSEECSSC
T ss_pred cHH-HHhhCCEEecCC
Confidence 554 445566665443
|
| >1l6r_A Hypothetical protein TA0175; structural genomics, putative hydrolas midwest center for structural genomics, MCSG, PSI; 1.40A {Thermoplasma acidophilum} SCOP: c.108.1.10 PDB: 1kyt_A | Back alignment and structure |
|---|
Probab=98.49 E-value=6e-08 Score=105.09 Aligned_cols=157 Identities=11% Similarity=0.086 Sum_probs=92.3
Q ss_pred cCcCCchhHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCcEEEeecC------CCceeeecCCCccccccCCh
Q 001010 672 NCPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLILCPVK------NGKVYEWVSPDETEKIQYSE 745 (1191)
Q Consensus 672 ~d~lK~da~~~I~~L~~agi~vvMiTGDn~~TA~~VA~~~gI~~~~~~il~~~~------~~~~~~w~~~d~~~~~~~~~ 745 (1191)
+..+.+++.++|++|++.|++++++||++...+..+++++|+.. ..|. .++ +++.+.|... + -..
T Consensus 20 ~~~i~~~~~~~l~~l~~~g~~~~i~TGr~~~~~~~~~~~l~~~~--~~I~-~NGa~i~~~~~~~i~~~~~-----l-~~~ 90 (227)
T 1l6r_A 20 DRLISTKAIESIRSAEKKGLTVSLLSGNVIPVVYALKIFLGING--PVFG-ENGGIMFDNDGSIKKFFSN-----E-GTN 90 (227)
T ss_dssp TSCBCHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCCS--CEEE-GGGTEEECTTSCEEESSCS-----H-HHH
T ss_pred CCcCCHHHHHHHHHHHHCCCEEEEECCCCcHHHHHHHHHhCCCC--eEEE-eCCcEEEeCCCCEEEEecc-----H-HHH
Confidence 45678999999999999999999999999999999999999742 1221 110 1111101110 0 000
Q ss_pred HHHhccccc--------------ceEEEechhhhhhcchHH---HHhhcCcceEE-----eecCh--hhHHHHHHHHhHc
Q 001010 746 KEVEGLTDA--------------HDLCIGGDCFEMLQQTSA---VLRVIPYVKVF-----ARVAP--EQKELILTTFKAV 801 (1191)
Q Consensus 746 ~~~~~~~~~--------------~~l~itG~~l~~l~~~~~---~~~~l~~~~Vf-----AR~sP--~qK~~iV~~Lq~~ 801 (1191)
.++ +.... .++.. .+ ...+... +.+.+ ...+. -...| .+|...++.+.+.
T Consensus 91 ~~i-~~~~~~~~~~~~~~~~~~~~~~~~---~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~ei~~~~~~K~~~l~~l~~~ 164 (227)
T 1l6r_A 91 KFL-EEMSKRTSMRSILTNRWREASTGF---DI-DPEDVDYVRKEAESR-GFVIFYSGYSWHLMNRGEDKAFAVNKLKEM 164 (227)
T ss_dssp HHH-HHHTTTSSCBCCGGGGGCSSSEEE---BC-CGGGHHHHHHHHHTT-TEEEEEETTEEEEEETTCSHHHHHHHHHHH
T ss_pred HHH-HHHHHHhcCCccccccceecccce---EE-ecCCHHHHHHHHHhc-CEEEEecCcEEEEecCCCCHHHHHHHHHHH
Confidence 000 00000 00000 00 0001111 11111 22332 23335 6899999888763
Q ss_pred -C---CEEEEEcCCccCHHHHhhCCceEEeccCCCccccccCCcccc
Q 001010 802 -G---RMTLMCGDGTNDVGALKQAHVGVALLNAVPPTQSGNSSSEAS 844 (1191)
Q Consensus 802 -g---~~V~m~GDG~ND~~ALk~AdVGIAl~~~~~e~~~~asdi~~~ 844 (1191)
| ..|+|+|||.||.+|++.|++||+|+++.++.+ +.++.+..
T Consensus 165 ~~~~~~~~~~iGD~~nD~~m~~~ag~~va~~n~~~~~k-~~a~~v~~ 210 (227)
T 1l6r_A 165 YSLEYDEILVIGDSNNDMPMFQLPVRKACPANATDNIK-AVSDFVSD 210 (227)
T ss_dssp TTCCGGGEEEECCSGGGHHHHTSSSEEEECTTSCHHHH-HHCSEECS
T ss_pred hCcCHHHEEEECCcHHhHHHHHHcCceEEecCchHHHH-HhCCEEec
Confidence 3 469999999999999999999999998766554 45555543
|
| >3n28_A Phosphoserine phosphatase; HAD family hydrolase, structural genomics, PSI, protein STRU initiative, nysgrc; 2.30A {Vibrio cholerae} | Back alignment and structure |
|---|
Probab=98.46 E-value=1.5e-07 Score=107.86 Aligned_cols=126 Identities=18% Similarity=0.226 Sum_probs=83.7
Q ss_pred cCCchhHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCcEEEeecCCCceeeecCCCccccccCChHHHhcccc
Q 001010 674 PIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLTD 753 (1191)
Q Consensus 674 ~lK~da~~~I~~L~~agi~vvMiTGDn~~TA~~VA~~~gI~~~~~~il~~~~~~~~~~w~~~d~~~~~~~~~~~~~~~~~ 753 (1191)
+++|++.+.++.|++.|+++.|+||++...+..+++++|+..--...+. ..
T Consensus 178 ~~~pg~~~~l~~L~~~g~~~~ivS~~~~~~~~~~~~~lgl~~~~~~~l~---------~~-------------------- 228 (335)
T 3n28_A 178 PLMPELPELVATLHAFGWKVAIASGGFTYFSDYLKEQLSLDYAQSNTLE---------IV-------------------- 228 (335)
T ss_dssp CCCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCSEEEEEEEE---------EE--------------------
T ss_pred CcCcCHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCCCeEEeeeeE---------ee--------------------
Confidence 7899999999999999999999999999999999999998420000000 00
Q ss_pred cceEEEechhhhhhcchHHHHhhcCcceEEeecChhhHHHHHHHHhHcCCEEEEEcCCccCHHHHhhCCceEEeccCCCc
Q 001010 754 AHDLCIGGDCFEMLQQTSAVLRVIPYVKVFARVAPEQKELILTTFKAVGRMTLMCGDGTNDVGALKQAHVGVALLNAVPP 833 (1191)
Q Consensus 754 ~~~l~itG~~l~~l~~~~~~~~~l~~~~VfAR~sP~qK~~iV~~Lq~~g~~V~m~GDG~ND~~ALk~AdVGIAl~~~~~e 833 (1191)
+-.++|.... ..+.++-.|+-...+.+.+.-....|+|+|||.||++|++.|++|++| ++.++
T Consensus 229 --d~~~tg~~~~--------------~~~~~kpk~~~~~~~~~~lgi~~~~~v~vGDs~nDi~~a~~aG~~va~-~~~~~ 291 (335)
T 3n28_A 229 --SGKLTGQVLG--------------EVVSAQTKADILLTLAQQYDVEIHNTVAVGDGANDLVMMAAAGLGVAY-HAKPK 291 (335)
T ss_dssp --TTEEEEEEES--------------CCCCHHHHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEE-SCCHH
T ss_pred --CCeeeeeecc--------------cccChhhhHHHHHHHHHHcCCChhhEEEEeCCHHHHHHHHHCCCeEEe-CCCHH
Confidence 0011111100 012223334444455555544456799999999999999999999999 55444
Q ss_pred cccccCCcccccc
Q 001010 834 TQSGNSSSEASKD 846 (1191)
Q Consensus 834 ~~~~asdi~~~~~ 846 (1191)
.++.++.+...+
T Consensus 292 -~~~~a~~v~~~~ 303 (335)
T 3n28_A 292 -VEAKAQTAVRFA 303 (335)
T ss_dssp -HHTTSSEEESSS
T ss_pred -HHhhCCEEEecC
Confidence 445556555433
|
| >3mmz_A Putative HAD family hydrolase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.84A {Streptomyces avermitilis} | Back alignment and structure |
|---|
Probab=98.45 E-value=1.9e-07 Score=96.96 Aligned_cols=95 Identities=19% Similarity=0.272 Sum_probs=73.9
Q ss_pred HHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCcEEEeecCCCceeeecCCCccccccCChHHHhcccccceEEEec
Q 001010 682 ILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLTDAHDLCIGG 761 (1191)
Q Consensus 682 ~I~~L~~agi~vvMiTGDn~~TA~~VA~~~gI~~~~~~il~~~~~~~~~~w~~~d~~~~~~~~~~~~~~~~~~~~l~itG 761 (1191)
+|+.|++.|+++.++||++...+..+++++||.
T Consensus 47 ~l~~L~~~g~~~~i~T~~~~~~~~~~~~~lgi~----------------------------------------------- 79 (176)
T 3mmz_A 47 GIAALRKSGLTMLILSTEQNPVVAARARKLKIP----------------------------------------------- 79 (176)
T ss_dssp HHHHHHHTTCEEEEEESSCCHHHHHHHHHHTCC-----------------------------------------------
T ss_pred HHHHHHHCCCeEEEEECcChHHHHHHHHHcCCe-----------------------------------------------
Confidence 999999999999999999999999999999982
Q ss_pred hhhhhhcchHHHHhhcCcceEEeecChhhHHHHHHHHhHc-C---CEEEEEcCCccCHHHHhhCCceEEeccCCCccccc
Q 001010 762 DCFEMLQQTSAVLRVIPYVKVFARVAPEQKELILTTFKAV-G---RMTLMCGDGTNDVGALKQAHVGVALLNAVPPTQSG 837 (1191)
Q Consensus 762 ~~l~~l~~~~~~~~~l~~~~VfAR~sP~qK~~iV~~Lq~~-g---~~V~m~GDG~ND~~ALk~AdVGIAl~~~~~e~~~~ 837 (1191)
+|+.. +.|...++.+.+. | ..++|+||+.||++|++.|++|++++++.++ .++
T Consensus 80 --------------------~~~~~--~~k~~~l~~~~~~~~~~~~~~~~vGD~~nD~~~~~~ag~~v~~~~~~~~-~~~ 136 (176)
T 3mmz_A 80 --------------------VLHGI--DRKDLALKQWCEEQGIAPERVLYVGNDVNDLPCFALVGWPVAVASAHDV-VRG 136 (176)
T ss_dssp --------------------EEESC--SCHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTCCHH-HHH
T ss_pred --------------------eEeCC--CChHHHHHHHHHHcCCCHHHEEEEcCCHHHHHHHHHCCCeEECCChhHH-HHH
Confidence 11111 4466666655442 3 5799999999999999999999999976554 444
Q ss_pred cCCcccccc
Q 001010 838 NSSSEASKD 846 (1191)
Q Consensus 838 asdi~~~~~ 846 (1191)
.++.+..++
T Consensus 137 ~ad~v~~~~ 145 (176)
T 3mmz_A 137 AARAVTTVP 145 (176)
T ss_dssp HSSEECSSC
T ss_pred hCCEEecCC
Confidence 556655443
|
| >3mpo_A Predicted hydrolase of the HAD superfamily; SGX, PSI, structural genomics, protein structure initiative; 2.90A {Lactobacillus brevis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.40 E-value=9.9e-07 Score=97.88 Aligned_cols=58 Identities=26% Similarity=0.340 Sum_probs=39.0
Q ss_pred hHHHHHHHHhH-cC---CEEEEEcCCccCHHHHhhCCceEEeccCCCccccccCCccccccc
Q 001010 790 QKELILTTFKA-VG---RMTLMCGDGTNDVGALKQAHVGVALLNAVPPTQSGNSSSEASKDE 847 (1191)
Q Consensus 790 qK~~iV~~Lq~-~g---~~V~m~GDG~ND~~ALk~AdVGIAl~~~~~e~~~~asdi~~~~~~ 847 (1191)
.|...++.+.+ .| ..|+++||+.||.+|++.|++||||+++.+++++.+..++.++++
T Consensus 197 ~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam~na~~~~k~~A~~v~~~~~e 258 (279)
T 3mpo_A 197 SKGGTLSELVDQLGLTADDVMTLGDQGNDLTMIKYAGLGVAMGNAIDEVKEAAQAVTLTNAE 258 (279)
T ss_dssp CHHHHHHHHHHHTTCCGGGEEEC--CCTTHHHHHHSTEECBC---CCHHHHHCSCBC-----
T ss_pred ChHHHHHHHHHHcCCCHHHEEEECCchhhHHHHHhcCceeeccCCCHHHHHhcceeccCCCc
Confidence 48888887765 34 369999999999999999999999999888876666555555543
|
| >3n1u_A Hydrolase, HAD superfamily, subfamily III A; structural genomics, PSI-2; 1.80A {Legionella pneumophila} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.38 E-value=1.9e-07 Score=98.34 Aligned_cols=98 Identities=20% Similarity=0.163 Sum_probs=74.2
Q ss_pred HHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCcEEEeecCCCceeeecCCCccccccCChHHHhcccccceEEEec
Q 001010 682 ILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLTDAHDLCIGG 761 (1191)
Q Consensus 682 ~I~~L~~agi~vvMiTGDn~~TA~~VA~~~gI~~~~~~il~~~~~~~~~~w~~~d~~~~~~~~~~~~~~~~~~~~l~itG 761 (1191)
+|+.|++.|+++.++||++...+..+++++|+..
T Consensus 54 ~l~~L~~~g~~~~ivTn~~~~~~~~~l~~lgl~~---------------------------------------------- 87 (191)
T 3n1u_A 54 GLKLLMAAGIQVAIITTAQNAVVDHRMEQLGITH---------------------------------------------- 87 (191)
T ss_dssp HHHHHHHTTCEEEEECSCCSHHHHHHHHHHTCCE----------------------------------------------
T ss_pred HHHHHHHCCCeEEEEeCcChHHHHHHHHHcCCcc----------------------------------------------
Confidence 4999999999999999999999999999999841
Q ss_pred hhhhhhcchHHHHhhcCcceEEeec--ChhhHHHHHHHHhHcCCEEEEEcCCccCHHHHhhCCceEEeccCCCccccccC
Q 001010 762 DCFEMLQQTSAVLRVIPYVKVFARV--APEQKELILTTFKAVGRMTLMCGDGTNDVGALKQAHVGVALLNAVPPTQSGNS 839 (1191)
Q Consensus 762 ~~l~~l~~~~~~~~~l~~~~VfAR~--sP~qK~~iV~~Lq~~g~~V~m~GDG~ND~~ALk~AdVGIAl~~~~~e~~~~as 839 (1191)
+|... .|+-...+++.+.-....++|+||+.||++|++.|+++++++++.++ .+..+
T Consensus 88 --------------------~~~~~kpk~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~~~~ag~~~~~~~~~~~-~~~~a 146 (191)
T 3n1u_A 88 --------------------YYKGQVDKRSAYQHLKKTLGLNDDEFAYIGDDLPDLPLIQQVGLGVAVSNAVPQ-VLEFA 146 (191)
T ss_dssp --------------------EECSCSSCHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTCCHH-HHHHS
T ss_pred --------------------ceeCCCChHHHHHHHHHHhCCCHHHEEEECCCHHHHHHHHHCCCEEEeCCccHH-HHHhC
Confidence 22222 34444455555544456799999999999999999999999976544 44455
Q ss_pred Ccccccc
Q 001010 840 SSEASKD 846 (1191)
Q Consensus 840 di~~~~~ 846 (1191)
+.+..++
T Consensus 147 d~v~~~~ 153 (191)
T 3n1u_A 147 DWRTERT 153 (191)
T ss_dssp SEECSSC
T ss_pred CEEecCC
Confidence 5555433
|
| >4dw8_A Haloacid dehalogenase-like hydrolase; HAD, putative phosphatase, enzyme function initiative, EFI, structural genomics; 1.50A {Bacteroides thetaiotaomicron} PDB: 3niw_A 4dwo_A | Back alignment and structure |
|---|
Probab=98.31 E-value=3.4e-06 Score=93.50 Aligned_cols=42 Identities=12% Similarity=0.211 Sum_probs=38.9
Q ss_pred CcCCchhHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCC
Q 001010 673 CPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIV 714 (1191)
Q Consensus 673 d~lK~da~~~I~~L~~agi~vvMiTGDn~~TA~~VA~~~gI~ 714 (1191)
..+-+.+.++|+++++.|++++++||.+...+..+.+++|+.
T Consensus 21 ~~i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~ 62 (279)
T 4dw8_A 21 KEISSRNRETLIRIQEQGIRLVLASGRPTYGIVPLANELRMN 62 (279)
T ss_dssp SCCCHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTGG
T ss_pred CccCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHhCCC
Confidence 457789999999999999999999999999999999999974
|
| >3pgv_A Haloacid dehalogenase-like hydrolase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: EPE; 2.39A {Klebsiella pneumoniae subsp} | Back alignment and structure |
|---|
Probab=98.30 E-value=3.6e-06 Score=93.95 Aligned_cols=59 Identities=24% Similarity=0.258 Sum_probs=46.4
Q ss_pred hhHHHHHHHHhH-cC---CEEEEEcCCccCHHHHhhCCceEEeccCCCccccccCC--ccccccc
Q 001010 789 EQKELILTTFKA-VG---RMTLMCGDGTNDVGALKQAHVGVALLNAVPPTQSGNSS--SEASKDE 847 (1191)
Q Consensus 789 ~qK~~iV~~Lq~-~g---~~V~m~GDG~ND~~ALk~AdVGIAl~~~~~e~~~~asd--i~~~~~~ 847 (1191)
..|..-++.|.+ .| ..|+++||+.||.+|++.|++||||+|+.+++++.+.. ++.++++
T Consensus 208 ~~K~~al~~l~~~lgi~~~~~ia~GD~~NDi~ml~~ag~~vAm~Na~~~vk~~A~~~~v~~sn~e 272 (285)
T 3pgv_A 208 VSKGHALEAVAKMLGYTLSDCIAFGDGMNDAEMLSMAGKGCIMANAHQRLKDLHPELEVIGSNAD 272 (285)
T ss_dssp CSHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHHHCTTSEECCCGGG
T ss_pred CChHHHHHHHHHHhCCCHHHEEEECCcHhhHHHHHhcCCEEEccCCCHHHHHhCCCCEecccCCc
Confidence 459888888765 34 36999999999999999999999999988887666653 3444443
|
| >3dao_A Putative phosphatse; structural genomics, joint center for S genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE 1PE CIT; 1.80A {Eubacterium rectale} | Back alignment and structure |
|---|
Probab=98.23 E-value=3.5e-06 Score=94.06 Aligned_cols=59 Identities=22% Similarity=0.147 Sum_probs=47.2
Q ss_pred hhHHHHHHHHhH-cC---CEEEEEcCCccCHHHHhhCCceEEeccCCCccccccCCccccccc
Q 001010 789 EQKELILTTFKA-VG---RMTLMCGDGTNDVGALKQAHVGVALLNAVPPTQSGNSSSEASKDE 847 (1191)
Q Consensus 789 ~qK~~iV~~Lq~-~g---~~V~m~GDG~ND~~ALk~AdVGIAl~~~~~e~~~~asdi~~~~~~ 847 (1191)
..|...++.|.+ .| ..|+++||+.||.+|++.|++||||+|+.+++++.+..++.++++
T Consensus 210 ~~K~~~l~~l~~~lgi~~~e~ia~GD~~NDi~ml~~ag~~vam~na~~~~k~~A~~v~~s~~e 272 (283)
T 3dao_A 210 VSKWTALSYLIDRFDLLPDEVCCFGDNLNDIEMLQNAGISYAVSNARQEVIAAAKHTCAPYWE 272 (283)
T ss_dssp CCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEEETTSCHHHHHHSSEEECCGGG
T ss_pred CcHHHHHHHHHHHhCCCHHHEEEECCCHHHHHHHHhCCCEEEcCCCCHHHHHhcCeECCCCCC
Confidence 359888888765 34 359999999999999999999999999888876666556555554
|
| >3e8m_A Acylneuraminate cytidylyltransferase; 2-keto-3-deoxynononic acid 9-phosphate phosphohydrolase, nucleotidyltransferase; HET: PEG PG4 EDO PGE; 1.10A {Bacteroides thetaiotaomicron} PDB: 3e84_A 3e81_A* | Back alignment and structure |
|---|
Probab=98.21 E-value=1.9e-06 Score=87.68 Aligned_cols=96 Identities=17% Similarity=0.068 Sum_probs=72.5
Q ss_pred HHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCcEEEeecCCCceeeecCCCccccccCChHHHhcccccceEEEec
Q 001010 682 ILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLTDAHDLCIGG 761 (1191)
Q Consensus 682 ~I~~L~~agi~vvMiTGDn~~TA~~VA~~~gI~~~~~~il~~~~~~~~~~w~~~d~~~~~~~~~~~~~~~~~~~~l~itG 761 (1191)
+++.|++.|+++.++||++...+..+++++|+..
T Consensus 39 ~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~gl~~---------------------------------------------- 72 (164)
T 3e8m_A 39 GIFWAHNKGIPVGILTGEKTEIVRRRAEKLKVDY---------------------------------------------- 72 (164)
T ss_dssp HHHHHHHTTCCEEEECSSCCHHHHHHHHHTTCSE----------------------------------------------
T ss_pred HHHHHHHCCCEEEEEeCCChHHHHHHHHHcCCCE----------------------------------------------
Confidence 8999999999999999999999999999999841
Q ss_pred hhhhhhcchHHHHhhcCcceEEeecChhhHHHHHHHHhH-c---CCEEEEEcCCccCHHHHhhCCceEEeccCCCccccc
Q 001010 762 DCFEMLQQTSAVLRVIPYVKVFARVAPEQKELILTTFKA-V---GRMTLMCGDGTNDVGALKQAHVGVALLNAVPPTQSG 837 (1191)
Q Consensus 762 ~~l~~l~~~~~~~~~l~~~~VfAR~sP~qK~~iV~~Lq~-~---g~~V~m~GDG~ND~~ALk~AdVGIAl~~~~~e~~~~ 837 (1191)
+|... +.|...++.+.+ . ...++|+||+.||+.|++.|++++++.++.+ ..++
T Consensus 73 --------------------~~~~~--kpk~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~~~~ag~~~~~~~~~~-~~~~ 129 (164)
T 3e8m_A 73 --------------------LFQGV--VDKLSAAEELCNELGINLEQVAYIGDDLNDAKLLKRVGIAGVPASAPF-YIRR 129 (164)
T ss_dssp --------------------EECSC--SCHHHHHHHHHHHHTCCGGGEEEECCSGGGHHHHTTSSEEECCTTSCH-HHHT
T ss_pred --------------------eeccc--CChHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCeEEcCChHH-HHHH
Confidence 12222 234444443332 2 3579999999999999999999999987554 4555
Q ss_pred cCCcccccc
Q 001010 838 NSSSEASKD 846 (1191)
Q Consensus 838 asdi~~~~~ 846 (1191)
.++++..++
T Consensus 130 ~ad~v~~~~ 138 (164)
T 3e8m_A 130 LSTIFLEKR 138 (164)
T ss_dssp TCSSCCCCC
T ss_pred hCcEEeccC
Confidence 566665444
|
| >3dnp_A Stress response protein YHAX; structural PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, unknown function; HET: MSE; 1.85A {Bacillus subtilis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.21 E-value=8e-06 Score=91.04 Aligned_cols=59 Identities=29% Similarity=0.308 Sum_probs=46.4
Q ss_pred hhHHHHHHHHhHc-C---CEEEEEcCCccCHHHHhhCCceEEeccCCCccccccCCccccccc
Q 001010 789 EQKELILTTFKAV-G---RMTLMCGDGTNDVGALKQAHVGVALLNAVPPTQSGNSSSEASKDE 847 (1191)
Q Consensus 789 ~qK~~iV~~Lq~~-g---~~V~m~GDG~ND~~ALk~AdVGIAl~~~~~e~~~~asdi~~~~~~ 847 (1191)
..|...++.+.+. | ..|+++||+.||.+|++.|++||||+++.+++++.++.++.++++
T Consensus 201 ~~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam~na~~~~k~~Ad~v~~s~~e 263 (290)
T 3dnp_A 201 VSKEAGLALVASELGLSMDDVVAIGHQYDDLPMIELAGLGVAMGNAVPEIKRKADWVTRSNDE 263 (290)
T ss_dssp CCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHHHSSEECCCTTT
T ss_pred CCHHHHHHHHHHHcCCCHHHEEEECCchhhHHHHHhcCCEEEecCCcHHHHHhcCEECCCCCc
Confidence 4688888777653 4 369999999999999999999999999888776665555555443
|
| >1svj_A Potassium-transporting ATPase B chain; alpha-beta sandwich, hydrolase; NMR {Escherichia coli} SCOP: d.220.1.1 PDB: 1u7q_A 2a00_A* 2a29_A* | Back alignment and structure |
|---|
Probab=98.17 E-value=3.4e-06 Score=85.48 Aligned_cols=138 Identities=10% Similarity=0.159 Sum_probs=86.1
Q ss_pred ccccccCCceEEEEEeecCCCccccccCCCchHHHHHHhhccceEEeCCcccCChHHHHHHhcccccccCCCccccCCCC
Q 001010 491 KTGTLTSDDMEFRGVVGLSNAELEDDMTKVPVRTQEILASCHALVFVDNKLVGDPLEKAALKGIDWSYKSDEKAMPKRGG 570 (1191)
Q Consensus 491 KTGTLT~~~l~v~gv~~~~~~~~~~~~~~~~~~~~~~la~chsl~~~~~~~~GdPle~all~~~~~~~~~~~~~~~~~~~ 570 (1191)
..||+|-|+..+..+.+.++. ..+ .+|..+.+++ .-..+|+.+|++++..-... ...
T Consensus 13 ~~~tit~gnr~vt~v~~~~g~---------~e~--elL~lAAs~E----~~SeHPla~AIv~~A~~~~~-----l~~--- 69 (156)
T 1svj_A 13 SSGHGGRHNRQASEFIPAQGV---------DEK--TLADAAQLAS----LADETPEGRSIVILAKQRFN-----LRE--- 69 (156)
T ss_dssp --------CEEEEEEEECTTS---------CHH--HHHHHHHHTT----SSCCSHHHHHHHHHHHHHTT-----CCC---
T ss_pred CCCceecCCCeEEEEEecCCC---------CHH--HHHHHHHHHh----CcCCCHHHHHHHHHHHHhcC-----CCc---
Confidence 469999999999999865431 111 2233233332 22468999999987642100 000
Q ss_pred CCccc--EEEEecCCCCCCcEEEEEEeCCeEEEEEeCcHHHHHHhc----cCChHHHHHHHHHHHHhcCeeeeEEEEeCC
Q 001010 571 GNAVQ--IVQRHHFASHLKRMSVVVRVQEEFFAFVKGAPETIQDRL----TDLPSSYIETYKKYTHQGSRVLALAFKSLP 644 (1191)
Q Consensus 571 ~~~~~--il~~~~Fss~~krmsvvv~~~~~~~~~~KGapE~I~~~~----~~~p~~~~~~~~~~a~~G~RVLalA~k~l~ 644 (1191)
...+ ..+..+|++..++.+|. .+++ .+.+|+++.|.+++ ..+|+.+.+..++++++|.+++.+|.
T Consensus 70 -~~~~~~~~~~~~F~a~~G~~Gv~--v~G~--~v~vGn~~~i~~l~~~~gi~~~~~~~~~~~~la~~G~T~v~VA~---- 140 (156)
T 1svj_A 70 -RDVQSLHATFVPFTAQSRMSGIN--IDNR--MIRKGSVDAIRRHVEANGGHFPTDVDQKVDQVARQGATPLVVVE---- 140 (156)
T ss_dssp -CCHHHHTCEEEEEETTTTEEEEE--ETTE--EEEEEEHHHHHHHHHHHTCCCCHHHHHHHHHHHHTTCEEEEEEE----
T ss_pred -ccccccccceeeccccCCCCeEE--ECCE--EEEEeCcHHHHHHHHHcCCCCcHHHHHHHHHHHhCCCCEEEEEE----
Confidence 0010 11235788877767773 4554 57899977665554 45777888999999999999999994
Q ss_pred CCChhhhhhccccccccCeEEeeeecccCcCCc
Q 001010 645 DMTVSDARSLHRDEVENGLTFAGFAVFNCPIRE 677 (1191)
Q Consensus 645 ~~~~~~~~~~~r~~~E~dL~flG~l~~~d~lK~ 677 (1191)
|..++|++.+.|++||
T Consensus 141 -----------------d~~l~GvIalaD~iK~ 156 (156)
T 1svj_A 141 -----------------GSRVLGVIALKDIVKG 156 (156)
T ss_dssp -----------------TTEEEEEEEEEECCCC
T ss_pred -----------------CCEEEEEEEEecCCCC
Confidence 5679999999999996
|
| >4ap9_A Phosphoserine phosphatase; hydrolase, haloacid dehalogenase superfamily, NDSB; HET: 1PS; 1.78A {Thermococcus onnurineus} PDB: 4b6j_A | Back alignment and structure |
|---|
Probab=98.06 E-value=2.5e-06 Score=88.60 Aligned_cols=102 Identities=16% Similarity=0.194 Sum_probs=77.3
Q ss_pred cCCchhHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCcEEEeecCCCceeeecCCCccccccCChHHHhcccc
Q 001010 674 PIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLTD 753 (1191)
Q Consensus 674 ~lK~da~~~I~~L~~agi~vvMiTGDn~~TA~~VA~~~gI~~~~~~il~~~~~~~~~~w~~~d~~~~~~~~~~~~~~~~~ 753 (1191)
+++|++.+.++.|++.|+++.++||++...+..+ +.+|+..-...+
T Consensus 79 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~-~~~~~~~~~~~~--------------------------------- 124 (201)
T 4ap9_A 79 NVSPEARELVETLREKGFKVVLISGSFEEVLEPF-KELGDEFMANRA--------------------------------- 124 (201)
T ss_dssp CCCHHHHHHHHHHHHTTCEEEEEEEEETTTSGGG-TTTSSEEEEEEE---------------------------------
T ss_pred CCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHH-HHcCchhheeeE---------------------------------
Confidence 7899999999999999999999999998888888 888873110000
Q ss_pred cceEEEechhhhhhcchHHHHhhcCcceEEeecChhhHHHHHHHHhHcCCEEEEEcCCccCHHHHhhCCceEEeccCCC
Q 001010 754 AHDLCIGGDCFEMLQQTSAVLRVIPYVKVFARVAPEQKELILTTFKAVGRMTLMCGDGTNDVGALKQAHVGVALLNAVP 832 (1191)
Q Consensus 754 ~~~l~itG~~l~~l~~~~~~~~~l~~~~VfAR~sP~qK~~iV~~Lq~~g~~V~m~GDG~ND~~ALk~AdVGIAl~~~~~ 832 (1191)
...... .--....|.+|...++.+ ....++|+||+.||+.|++.|++||+|+++.+
T Consensus 125 ----~~~~~~-----------------~~~~~~~~~~k~~~l~~l--~~~~~i~iGD~~~Di~~~~~ag~~v~~~~~~~ 180 (201)
T 4ap9_A 125 ----IFEDGK-----------------FQGIRLRFRDKGEFLKRF--RDGFILAMGDGYADAKMFERADMGIAVGREIP 180 (201)
T ss_dssp ----EEETTE-----------------EEEEECCSSCHHHHHGGG--TTSCEEEEECTTCCHHHHHHCSEEEEESSCCT
T ss_pred ----EeeCCc-----------------eECCcCCccCHHHHHHhc--CcCcEEEEeCCHHHHHHHHhCCceEEECCCCc
Confidence 000000 000344567899988888 55679999999999999999999999997755
|
| >3m1y_A Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, phophoserine phosphatase, protein structure initiative, structural genomics; 2.40A {Helicobacter pylori} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.06 E-value=6.3e-06 Score=87.04 Aligned_cols=123 Identities=21% Similarity=0.293 Sum_probs=82.1
Q ss_pred CcCCchhHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCcEEEeecCCCceeeecCCCccccccCChHHHhccc
Q 001010 673 CPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLT 752 (1191)
Q Consensus 673 d~lK~da~~~I~~L~~agi~vvMiTGDn~~TA~~VA~~~gI~~~~~~il~~~~~~~~~~w~~~d~~~~~~~~~~~~~~~~ 752 (1191)
-++.|++.+.++.|++.|+++.++|+.+...+..+.+.+|+..--..++...+
T Consensus 74 ~~~~~~~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~gl~~~f~~~~~~~~--------------------------- 126 (217)
T 3m1y_A 74 LPLFEGALELVSALKEKNYKVVCFSGGFDLATNHYRDLLHLDAAFSNTLIVEN--------------------------- 126 (217)
T ss_dssp CCBCBTHHHHHHHHHTTTEEEEEEEEEEHHHHHHHHHHHTCSEEEEEEEEEET---------------------------
T ss_pred CcCCCCHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHHcCcchhccceeEEeC---------------------------
Confidence 46899999999999999999999999999999999999998521000100000
Q ss_pred ccceEEEechhhhhhcchHHHHhhcCcceEEee-cChhhHHHHHHHHhH-cC---CEEEEEcCCccCHHHHhhCCceEEe
Q 001010 753 DAHDLCIGGDCFEMLQQTSAVLRVIPYVKVFAR-VAPEQKELILTTFKA-VG---RMTLMCGDGTNDVGALKQAHVGVAL 827 (1191)
Q Consensus 753 ~~~~l~itG~~l~~l~~~~~~~~~l~~~~VfAR-~sP~qK~~iV~~Lq~-~g---~~V~m~GDG~ND~~ALk~AdVGIAl 827 (1191)
-.++|. +... .....|...++.+.+ .| ..++|+||+.||+.|++.|++++++
T Consensus 127 ----~~~~~~-------------------~~~~~~~~k~k~~~~~~~~~~~g~~~~~~i~vGDs~~Di~~a~~aG~~~~~ 183 (217)
T 3m1y_A 127 ----DALNGL-------------------VTGHMMFSHSKGEMLLVLQRLLNISKTNTLVVGDGANDLSMFKHAHIKIAF 183 (217)
T ss_dssp ----TEEEEE-------------------EEESCCSTTHHHHHHHHHHHHHTCCSTTEEEEECSGGGHHHHTTCSEEEEE
T ss_pred ----CEEEee-------------------eccCCCCCCChHHHHHHHHHHcCCCHhHEEEEeCCHHHHHHHHHCCCeEEE
Confidence 000110 0011 123445565555433 23 5699999999999999999999999
Q ss_pred ccCCCccccccCCccccccc
Q 001010 828 LNAVPPTQSGNSSSEASKDE 847 (1191)
Q Consensus 828 ~~~~~e~~~~asdi~~~~~~ 847 (1191)
++.++. ++.+|.+..+++
T Consensus 184 -~~~~~l-~~~ad~v~~~~d 201 (217)
T 3m1y_A 184 -NAKEVL-KQHATHCINEPD 201 (217)
T ss_dssp -SCCHHH-HTTCSEEECSSB
T ss_pred -CccHHH-HHhcceeecccC
Confidence 554444 455666654443
|
| >2r8e_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; YRBI, divalent metal, HAD superfamily, KDO 8-P, hydrolase; 1.40A {Escherichia coli O6} PDB: 2r8x_A 2r8y_A 2r8z_A 3hyc_A 3i6b_A* | Back alignment and structure |
|---|
Probab=98.05 E-value=8.7e-06 Score=85.19 Aligned_cols=96 Identities=16% Similarity=0.146 Sum_probs=71.5
Q ss_pred HHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCcEEEeecCCCceeeecCCCccccccCChHHHhcccccceEEEe
Q 001010 681 KILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLTDAHDLCIG 760 (1191)
Q Consensus 681 ~~I~~L~~agi~vvMiTGDn~~TA~~VA~~~gI~~~~~~il~~~~~~~~~~w~~~d~~~~~~~~~~~~~~~~~~~~l~it 760 (1191)
.+|+.|++.|+++.++||++...+..+++++|+..
T Consensus 60 ~~l~~L~~~g~~v~ivT~~~~~~~~~~l~~lgl~~--------------------------------------------- 94 (188)
T 2r8e_A 60 YGIRCALTSDIEVAIITGRKAKLVEDRCATLGITH--------------------------------------------- 94 (188)
T ss_dssp HHHHHHHTTTCEEEEECSSCCHHHHHHHHHHTCCE---------------------------------------------
T ss_pred HHHHHHHHCCCeEEEEeCCChHHHHHHHHHcCCce---------------------------------------------
Confidence 38999999999999999999999999999999841
Q ss_pred chhhhhhcchHHHHhhcCcceEEeecChhhHHHHHHHHh-HcC---CEEEEEcCCccCHHHHhhCCceEEeccCCCcccc
Q 001010 761 GDCFEMLQQTSAVLRVIPYVKVFARVAPEQKELILTTFK-AVG---RMTLMCGDGTNDVGALKQAHVGVALLNAVPPTQS 836 (1191)
Q Consensus 761 G~~l~~l~~~~~~~~~l~~~~VfAR~sP~qK~~iV~~Lq-~~g---~~V~m~GDG~ND~~ALk~AdVGIAl~~~~~e~~~ 836 (1191)
+|... ..|...++.+. +.| ..++|+||+.||+.|++.|+++++++++.++. +
T Consensus 95 ---------------------~~~~~--kpk~~~~~~~~~~~g~~~~~~~~iGD~~~Di~~a~~ag~~~~~~~~~~~~-~ 150 (188)
T 2r8e_A 95 ---------------------LYQGQ--SNKLIAFSDLLEKLAIAPENVAYVGDDLIDWPVMEKVGLSVAVADAHPLL-I 150 (188)
T ss_dssp ---------------------EECSC--SCSHHHHHHHHHHHTCCGGGEEEEESSGGGHHHHTTSSEEEECTTSCTTT-G
T ss_pred ---------------------eecCC--CCCHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCEEEecCcCHHH-H
Confidence 12222 22344444433 334 57999999999999999999999998765443 4
Q ss_pred ccCCccccc
Q 001010 837 GNSSSEASK 845 (1191)
Q Consensus 837 ~asdi~~~~ 845 (1191)
+.++.+..+
T Consensus 151 ~~ad~v~~~ 159 (188)
T 2r8e_A 151 PRADYVTRI 159 (188)
T ss_dssp GGSSEECSS
T ss_pred hcCCEEEeC
Confidence 455655543
|
| >2pq0_A Hypothetical conserved protein GK1056; hyopthetical protein, structural genomics, unknown function; 2.60A {Geobacillus kaustophilus} PDB: 2qyh_A | Back alignment and structure |
|---|
Probab=98.05 E-value=1.2e-05 Score=88.06 Aligned_cols=41 Identities=22% Similarity=0.202 Sum_probs=37.7
Q ss_pred CcCCchhHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCC
Q 001010 673 CPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHI 713 (1191)
Q Consensus 673 d~lK~da~~~I~~L~~agi~vvMiTGDn~~TA~~VA~~~gI 713 (1191)
..+.+.+.++|+++++.|+++++.||.+...+..+.+++|+
T Consensus 19 ~~i~~~~~~al~~l~~~G~~~~~aTGR~~~~~~~~~~~l~~ 59 (258)
T 2pq0_A 19 KQLPLSTIEAVRRLKQSGVYVAIATGRAPFMFEHVRKQLGI 59 (258)
T ss_dssp SCCCHHHHHHHHHHHHTTCEEEEECSSCGGGSHHHHHHHTC
T ss_pred CccCHHHHHHHHHHHHCCCEEEEECCCChHHHHHHHHhcCC
Confidence 35778899999999999999999999999999999999886
|
| >3fzq_A Putative hydrolase; YP_001086940.1, putative haloacid dehalogenase-like hydrolas structural genomics, joint center for structural genomics; HET: MSE; 2.10A {Clostridium difficile} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.03 E-value=1.2e-05 Score=88.67 Aligned_cols=59 Identities=20% Similarity=0.275 Sum_probs=45.3
Q ss_pred hhHHHHHHHHhH-cC---CEEEEEcCCccCHHHHhhCCceEEeccCCCccccccCCccccccc
Q 001010 789 EQKELILTTFKA-VG---RMTLMCGDGTNDVGALKQAHVGVALLNAVPPTQSGNSSSEASKDE 847 (1191)
Q Consensus 789 ~qK~~iV~~Lq~-~g---~~V~m~GDG~ND~~ALk~AdVGIAl~~~~~e~~~~asdi~~~~~~ 847 (1191)
..|...++.+.+ .| ..++++||+.||.+|++.|++||||+++.+++++.+..++.++++
T Consensus 199 ~~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam~na~~~~k~~A~~v~~~~~e 261 (274)
T 3fzq_A 199 FHKGKAIKRLQERLGVTQKETICFGDGQNDIVMFQASDVTIAMKNSHQQLKDIATSICEDIFD 261 (274)
T ss_dssp CSHHHHHHHHHHHHTCCSTTEEEECCSGGGHHHHHTCSEEEEETTSCHHHHHHCSEEECCGGG
T ss_pred CCHHHHHHHHHHHcCCCHHHEEEECCChhHHHHHHhcCceEEecCccHHHHHhhhheeCCCch
Confidence 358877777655 23 469999999999999999999999999887766655545554443
|
| >4eze_A Haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 2.27A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=98.01 E-value=7.3e-06 Score=93.29 Aligned_cols=109 Identities=19% Similarity=0.302 Sum_probs=74.6
Q ss_pred cCCchhHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCcEEEeecCCCceeeecCCCccccccCChHHHhcccc
Q 001010 674 PIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLTD 753 (1191)
Q Consensus 674 ~lK~da~~~I~~L~~agi~vvMiTGDn~~TA~~VA~~~gI~~~~~~il~~~~~~~~~~w~~~d~~~~~~~~~~~~~~~~~ 753 (1191)
++.|++.++++.|++.|+++.++||.....+..+++.+|+.. +.+.. +... +
T Consensus 179 ~l~pg~~e~L~~Lk~~G~~v~IvSn~~~~~~~~~l~~lgl~~----~f~~~-----l~~~---d---------------- 230 (317)
T 4eze_A 179 TLSPGLLTILPVIKAKGFKTAIISGGLDIFTQRLKARYQLDY----AFSNT-----VEIR---D---------------- 230 (317)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCSE----EEEEC-----EEEE---T----------------
T ss_pred EECcCHHHHHHHHHhCCCEEEEEeCccHHHHHHHHHHcCCCe----EEEEE-----EEee---C----------------
Confidence 589999999999999999999999999999999999999841 11000 0000 0
Q ss_pred cceEEEechhhhhhcchHHHHhhcCcceEEe-ecChhhHHHHHHHHh-HcC---CEEEEEcCCccCHHHHhhCCceEEec
Q 001010 754 AHDLCIGGDCFEMLQQTSAVLRVIPYVKVFA-RVAPEQKELILTTFK-AVG---RMTLMCGDGTNDVGALKQAHVGVALL 828 (1191)
Q Consensus 754 ~~~l~itG~~l~~l~~~~~~~~~l~~~~VfA-R~sP~qK~~iV~~Lq-~~g---~~V~m~GDG~ND~~ALk~AdVGIAl~ 828 (1191)
-..+|. +.. -..++.|..+++.+. +.| ..++|+||+.||++|++.|++|+++
T Consensus 231 ---g~~tg~-------------------i~~~~~~~kpkp~~~~~~~~~lgv~~~~~i~VGDs~~Di~aa~~AG~~va~- 287 (317)
T 4eze_A 231 ---NVLTDN-------------------ITLPIMNAANKKQTLVDLAARLNIATENIIACGDGANDLPMLEHAGTGIAW- 287 (317)
T ss_dssp ---TEEEEE-------------------ECSSCCCHHHHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEE-
T ss_pred ---Ceeeee-------------------EecccCCCCCCHHHHHHHHHHcCCCcceEEEEeCCHHHHHHHHHCCCeEEe-
Confidence 001111 000 012345555555443 333 4699999999999999999999999
Q ss_pred cCCCc
Q 001010 829 NAVPP 833 (1191)
Q Consensus 829 ~~~~e 833 (1191)
++.+.
T Consensus 288 ~~~~~ 292 (317)
T 4eze_A 288 KAKPV 292 (317)
T ss_dssp SCCHH
T ss_pred CCCHH
Confidence 34433
|
| >1l7m_A Phosphoserine phosphatase; rossmann fold, four-helix bundle, B-hairpin, structural genomics, BSGC structure funded by NIH; 1.48A {Methanocaldococcus jannaschii} SCOP: c.108.1.4 PDB: 1f5s_A 1l7n_A 1l7p_A* 1l7o_A* 1j97_A* | Back alignment and structure |
|---|
Probab=98.00 E-value=9.5e-06 Score=84.92 Aligned_cols=121 Identities=22% Similarity=0.269 Sum_probs=78.8
Q ss_pred cCcCCchhHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCcEEEeecCCCceeeecCCCccccccCChHHHhcc
Q 001010 672 NCPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGL 751 (1191)
Q Consensus 672 ~d~lK~da~~~I~~L~~agi~vvMiTGDn~~TA~~VA~~~gI~~~~~~il~~~~~~~~~~w~~~d~~~~~~~~~~~~~~~ 751 (1191)
+.++.|+++++++.|++.|+++.++||+....+..+.+++|+.. .... .+... +.
T Consensus 74 ~~~l~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~~~~~---~~~~------~~~~~--~~-------------- 128 (211)
T 1l7m_A 74 RITPTEGAEETIKELKNRGYVVAVVSGGFDIAVNKIKEKLGLDY---AFAN------RLIVK--DG-------------- 128 (211)
T ss_dssp TCCBCTTHHHHHHHHHHTTEEEEEEEEEEHHHHHHHHHHHTCSE---EEEE------EEEEE--TT--------------
T ss_pred hCCCCccHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCCCe---EEEe------eeEEE--CC--------------
Confidence 34677899999999999999999999999888888888888731 1000 00000 00
Q ss_pred cccceEEEechhhhhhcchHHHHhhcCcceEEee-cChhhHHHHHHHH-hHcC---CEEEEEcCCccCHHHHhhCCceEE
Q 001010 752 TDAHDLCIGGDCFEMLQQTSAVLRVIPYVKVFAR-VAPEQKELILTTF-KAVG---RMTLMCGDGTNDVGALKQAHVGVA 826 (1191)
Q Consensus 752 ~~~~~l~itG~~l~~l~~~~~~~~~l~~~~VfAR-~sP~qK~~iV~~L-q~~g---~~V~m~GDG~ND~~ALk~AdVGIA 826 (1191)
.++|+ +... +.+..|...+..+ ++.| ..++|+||+.||..|++.|++|++
T Consensus 129 ------~~~~~-------------------~~~~~~~~~~K~~~l~~~~~~lgi~~~~~~~iGD~~~Di~~~~~ag~~~~ 183 (211)
T 1l7m_A 129 ------KLTGD-------------------VEGEVLKENAKGEILEKIAKIEGINLEDTVAVGDGANDISMFKKAGLKIA 183 (211)
T ss_dssp ------EEEEE-------------------EECSSCSTTHHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHCSEEEE
T ss_pred ------EEcCC-------------------cccCccCCccHHHHHHHHHHHcCCCHHHEEEEecChhHHHHHHHCCCEEE
Confidence 00111 1001 1245676555544 4444 359999999999999999999999
Q ss_pred eccCCCccccccCCcccc
Q 001010 827 LLNAVPPTQSGNSSSEAS 844 (1191)
Q Consensus 827 l~~~~~e~~~~asdi~~~ 844 (1191)
|+ +.++. +..++.+..
T Consensus 184 ~~-~~~~~-~~~a~~v~~ 199 (211)
T 1l7m_A 184 FC-AKPIL-KEKADICIE 199 (211)
T ss_dssp ES-CCHHH-HTTCSEEEC
T ss_pred EC-CCHHH-Hhhcceeec
Confidence 98 44443 444555543
|
| >3p96_A Phosphoserine phosphatase SERB; ssgcid, structural genomics, structural genomics center for infectious disease, hydrolas; 2.05A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=97.99 E-value=6.2e-06 Score=97.46 Aligned_cols=120 Identities=21% Similarity=0.273 Sum_probs=82.4
Q ss_pred cCCchhHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCcEEEeecCCCceeeecCCCccccccCChHHHhcccc
Q 001010 674 PIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLTD 753 (1191)
Q Consensus 674 ~lK~da~~~I~~L~~agi~vvMiTGDn~~TA~~VA~~~gI~~~~~~il~~~~~~~~~~w~~~d~~~~~~~~~~~~~~~~~ 753 (1191)
++.|++.+.++.|++.|+++.++||.....+..+++.+|+.. +... .+..
T Consensus 256 ~~~pg~~e~l~~Lk~~G~~~~ivS~~~~~~~~~~~~~lgl~~----~~~~-----~l~~--------------------- 305 (415)
T 3p96_A 256 ELMPGARTTLRTLRRLGYACGVVSGGFRRIIEPLAEELMLDY----VAAN-----ELEI--------------------- 305 (415)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCSE----EEEE-----CEEE---------------------
T ss_pred ccCccHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCccc----eeee-----eEEE---------------------
Confidence 789999999999999999999999999999999999999941 1100 0000
Q ss_pred cceEEEechhhhhhcchHHHHhhcCcceEEeecChhhHHHHHHHHhH-cC---CEEEEEcCCccCHHHHhhCCceEEecc
Q 001010 754 AHDLCIGGDCFEMLQQTSAVLRVIPYVKVFARVAPEQKELILTTFKA-VG---RMTLMCGDGTNDVGALKQAHVGVALLN 829 (1191)
Q Consensus 754 ~~~l~itG~~l~~l~~~~~~~~~l~~~~VfAR~sP~qK~~iV~~Lq~-~g---~~V~m~GDG~ND~~ALk~AdVGIAl~~ 829 (1191)
.+-.+||+... .-..++.|..+++.+.+ .| ..++|+|||.||.+|++.|++|+++ +
T Consensus 306 -~dg~~tg~~~~------------------~v~~~kpk~~~~~~~~~~~gi~~~~~i~vGD~~~Di~~a~~aG~~va~-~ 365 (415)
T 3p96_A 306 -VDGTLTGRVVG------------------PIIDRAGKATALREFAQRAGVPMAQTVAVGDGANDIDMLAAAGLGIAF-N 365 (415)
T ss_dssp -ETTEEEEEECS------------------SCCCHHHHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEE-S
T ss_pred -eCCEEEeeEcc------------------CCCCCcchHHHHHHHHHHcCcChhhEEEEECCHHHHHHHHHCCCeEEE-C
Confidence 00112222110 00125667777766544 34 4699999999999999999999999 4
Q ss_pred CCCccccccCCcccc
Q 001010 830 AVPPTQSGNSSSEAS 844 (1191)
Q Consensus 830 ~~~e~~~~asdi~~~ 844 (1191)
+.++. ++.++.+..
T Consensus 366 ~~~~~-~~~ad~~i~ 379 (415)
T 3p96_A 366 AKPAL-REVADASLS 379 (415)
T ss_dssp CCHHH-HHHCSEEEC
T ss_pred CCHHH-HHhCCEEEc
Confidence 54443 444555543
|
| >3l7y_A Putative uncharacterized protein SMU.1108C; hydrolase; 2.00A {Streptococcus mutans} | Back alignment and structure |
|---|
Probab=97.98 E-value=1.5e-05 Score=89.72 Aligned_cols=59 Identities=27% Similarity=0.298 Sum_probs=46.4
Q ss_pred hhHHHHHHHHhH-cC---CEEEEEcCCccCHHHHhhCCceEEeccCCCccccccCCccccccc
Q 001010 789 EQKELILTTFKA-VG---RMTLMCGDGTNDVGALKQAHVGVALLNAVPPTQSGNSSSEASKDE 847 (1191)
Q Consensus 789 ~qK~~iV~~Lq~-~g---~~V~m~GDG~ND~~ALk~AdVGIAl~~~~~e~~~~asdi~~~~~~ 847 (1191)
..|..-++.+.+ .| ..|+++||+.||.+|++.|++||||+|+.+++++.++.++.++++
T Consensus 227 ~~K~~al~~l~~~lgi~~~e~i~~GDs~NDi~m~~~ag~~vam~na~~~~k~~Ad~v~~~~~e 289 (304)
T 3l7y_A 227 LHKGWALQQLLKRWNFTSDHLMAFGDGGNDIEMLKLAKYSYAMANAPKNVKAAANYQAKSNDE 289 (304)
T ss_dssp CSHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHCTEEEECTTSCHHHHHHCSEECCCGGG
T ss_pred CCHHHHHHHHHHHhCcCHHHEEEECCCHHHHHHHHhcCCeEEcCCcCHHHHHhccEEcCCCCc
Confidence 569888887765 34 359999999999999999999999999887766655555554443
|
| >3r4c_A Hydrolase, haloacid dehalogenase-like hydrolase; haloalkanoate dehalogenase enzyme superfamily, phosphohydrol hydrolase; 1.82A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=97.93 E-value=2.4e-05 Score=86.07 Aligned_cols=59 Identities=34% Similarity=0.407 Sum_probs=46.2
Q ss_pred hhHHHHHHHHhH-cC---CEEEEEcCCccCHHHHhhCCceEEeccCCCccccccCCccccccc
Q 001010 789 EQKELILTTFKA-VG---RMTLMCGDGTNDVGALKQAHVGVALLNAVPPTQSGNSSSEASKDE 847 (1191)
Q Consensus 789 ~qK~~iV~~Lq~-~g---~~V~m~GDG~ND~~ALk~AdVGIAl~~~~~e~~~~asdi~~~~~~ 847 (1191)
..|..-++.+.+ .| ..|+++||+.||.+|++.|++||||+|+.+++++.++.++.++++
T Consensus 193 ~~K~~~l~~l~~~lgi~~~~~ia~GD~~NDi~m~~~ag~~vam~na~~~~k~~Ad~v~~~~~e 255 (268)
T 3r4c_A 193 TSKATGLSLFADYYRVKVSEIMACGDGGNDIPMLKAAGIGVAMGNASEKVQSVADFVTDTVDN 255 (268)
T ss_dssp CCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHHTCSEECCCTTT
T ss_pred CCHHHHHHHHHHHcCCCHHHEEEECCcHHhHHHHHhCCCeEEeCCCcHHHHHhcCEeeCCCCc
Confidence 468888877665 34 359999999999999999999999999888876665555555543
|
| >1rku_A Homoserine kinase; phosphoserine phosphatase, phosphoserine:homoserine phosphotransferase, THRH, phosphoserine phosphoryl donor; 1.47A {Pseudomonas aeruginosa} SCOP: c.108.1.11 PDB: 1rkv_A | Back alignment and structure |
|---|
Probab=97.92 E-value=2.5e-05 Score=82.05 Aligned_cols=104 Identities=16% Similarity=0.137 Sum_probs=79.6
Q ss_pred CcCCchhHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCcEEEeecCCCceeeecCCCccccccCChHHHhccc
Q 001010 673 CPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLT 752 (1191)
Q Consensus 673 d~lK~da~~~I~~L~~agi~vvMiTGDn~~TA~~VA~~~gI~~~~~~il~~~~~~~~~~w~~~d~~~~~~~~~~~~~~~~ 752 (1191)
-++.|++.+.++.|++. +++.++|+.+...+..+.+.+|+... +-
T Consensus 68 ~~~~~g~~~~l~~l~~~-~~~~i~s~~~~~~~~~~l~~~gl~~~---f~------------------------------- 112 (206)
T 1rku_A 68 LKPLEGAVEFVDWLRER-FQVVILSDTFYEFSQPLMRQLGFPTL---LC------------------------------- 112 (206)
T ss_dssp CCCCTTHHHHHHHHHTT-SEEEEEEEEEHHHHHHHHHHTTCCCE---EE-------------------------------
T ss_pred cCCCccHHHHHHHHHhc-CcEEEEECChHHHHHHHHHHcCCcce---ec-------------------------------
Confidence 46799999999999999 99999999999999999999998521 00
Q ss_pred ccceEEEechhhhhhcchHHHHhhcCcceEEeecChhhHHHHHHHHhHcCCEEEEEcCCccCHHHHhhCCceEEec
Q 001010 753 DAHDLCIGGDCFEMLQQTSAVLRVIPYVKVFARVAPEQKELILTTFKAVGRMTLMCGDGTNDVGALKQAHVGVALL 828 (1191)
Q Consensus 753 ~~~~l~itG~~l~~l~~~~~~~~~l~~~~VfAR~sP~qK~~iV~~Lq~~g~~V~m~GDG~ND~~ALk~AdVGIAl~ 828 (1191)
+..+.+... .....-.-.|+.|...++.+......++|+||+.||+.|.+.|++++++.
T Consensus 113 ---~~~~~~~~~--------------~~~~~~~p~p~~~~~~l~~l~~~~~~~~~iGD~~~Di~~a~~aG~~~~~~ 171 (206)
T 1rku_A 113 ---HKLEIDDSD--------------RVVGYQLRQKDPKRQSVIAFKSLYYRVIAAGDSYNDTTMLSEAHAGILFH 171 (206)
T ss_dssp ---EEEEECTTS--------------CEEEEECCSSSHHHHHHHHHHHTTCEEEEEECSSTTHHHHHHSSEEEEES
T ss_pred ---ceeEEcCCc--------------eEEeeecCCCchHHHHHHHHHhcCCEEEEEeCChhhHHHHHhcCccEEEC
Confidence 000010000 00001124688999999999888889999999999999999999999974
|
| >3m9l_A Hydrolase, haloacid dehalogenase-like family; HAD family hydrolase, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Pseudomonas fluorescens} PDB: 2ybd_A* 3r09_A* | Back alignment and structure |
|---|
Probab=97.91 E-value=9.1e-06 Score=85.39 Aligned_cols=113 Identities=14% Similarity=0.096 Sum_probs=76.4
Q ss_pred cCCchhHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCC--cEEEeecCCCceeeecCCCccccccCChHHHhcc
Q 001010 674 PIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKP--VLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGL 751 (1191)
Q Consensus 674 ~lK~da~~~I~~L~~agi~vvMiTGDn~~TA~~VA~~~gI~~~~--~~il~~~~~~~~~~w~~~d~~~~~~~~~~~~~~~ 751 (1191)
++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+...- ..+
T Consensus 70 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~i------------------------------- 118 (205)
T 3m9l_A 70 RPAPGAVELVRELAGRGYRLGILTRNARELAHVTLEAIGLADCFAEADV------------------------------- 118 (205)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGSCGGGE-------------------------------
T ss_pred CCCccHHHHHHHHHhcCCeEEEEeCCchHHHHHHHHHcCchhhcCcceE-------------------------------
Confidence 56789999999999999999999999999999999999984210 001
Q ss_pred cccceEEEechhhhhhcchHHHHhhcCcceEEeecChhhHHHHHHHHhHcCCEEEEEcCCccCHHHHhhCCc-eEEeccC
Q 001010 752 TDAHDLCIGGDCFEMLQQTSAVLRVIPYVKVFARVAPEQKELILTTFKAVGRMTLMCGDGTNDVGALKQAHV-GVALLNA 830 (1191)
Q Consensus 752 ~~~~~l~itG~~l~~l~~~~~~~~~l~~~~VfAR~sP~qK~~iV~~Lq~~g~~V~m~GDG~ND~~ALk~AdV-GIAl~~~ 830 (1191)
++++. ....-.|+--..+++.+.-....++|+||+.||+.|.+.|++ +|+|+++
T Consensus 119 -------~~~~~------------------~~~kp~~~~~~~~~~~~g~~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~~ 173 (205)
T 3m9l_A 119 -------LGRDE------------------APPKPHPGGLLKLAEAWDVSPSRMVMVGDYRFDLDCGRAAGTRTVLVNLP 173 (205)
T ss_dssp -------ECTTT------------------SCCTTSSHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEECSSS
T ss_pred -------EeCCC------------------CCCCCCHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCCEEEEEeCC
Confidence 11100 000111222223333332223569999999999999999999 9999987
Q ss_pred CCccccccCCccc
Q 001010 831 VPPTQSGNSSSEA 843 (1191)
Q Consensus 831 ~~e~~~~asdi~~ 843 (1191)
.++... .+|.+.
T Consensus 174 ~~~~~~-~ad~v~ 185 (205)
T 3m9l_A 174 DNPWPE-LTDWHA 185 (205)
T ss_dssp SCSCGG-GCSEEC
T ss_pred CCcccc-cCCEEe
Confidence 765443 344444
|
| >1rkq_A Hypothetical protein YIDA; two domain structure with beta-alpha sandwich. stucture contains A magnesium ION., PSI, protein structure initiative; 1.40A {Escherichia coli} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=97.91 E-value=4.3e-05 Score=85.19 Aligned_cols=42 Identities=10% Similarity=0.160 Sum_probs=38.7
Q ss_pred CcCCchhHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCC
Q 001010 673 CPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIV 714 (1191)
Q Consensus 673 d~lK~da~~~I~~L~~agi~vvMiTGDn~~TA~~VA~~~gI~ 714 (1191)
..+-++++++|++|++.|++++++||.....+..+.+++++.
T Consensus 21 ~~i~~~~~~aL~~l~~~Gi~vviaTGR~~~~~~~~~~~l~l~ 62 (282)
T 1rkq_A 21 HTISPAVKNAIAAARARGVNVVLTTGRPYAGVHNYLKELHME 62 (282)
T ss_dssp SCCCHHHHHHHHHHHHTTCEEEEECSSCGGGTHHHHHHTTCC
T ss_pred CcCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHhCCC
Confidence 457789999999999999999999999999999999999974
|
| >2p9j_A Hypothetical protein AQ2171; secsg, riken, PSI, structural GENO protein structure initiative, southeast collaboratory for S genomics; 2.40A {Aquifex aeolicus} | Back alignment and structure |
|---|
Probab=97.91 E-value=1.4e-05 Score=81.00 Aligned_cols=103 Identities=17% Similarity=0.130 Sum_probs=73.0
Q ss_pred CCchhHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCcEEEeecCCCceeeecCCCccccccCChHHHhccccc
Q 001010 675 IREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLTDA 754 (1191)
Q Consensus 675 lK~da~~~I~~L~~agi~vvMiTGDn~~TA~~VA~~~gI~~~~~~il~~~~~~~~~~w~~~d~~~~~~~~~~~~~~~~~~ 754 (1191)
+.+++.++|+.|++.|++++++||.+...+..+.+++|+..
T Consensus 37 ~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~--------------------------------------- 77 (162)
T 2p9j_A 37 FNVLDGIGIKLLQKMGITLAVISGRDSAPLITRLKELGVEE--------------------------------------- 77 (162)
T ss_dssp EEHHHHHHHHHHHTTTCEEEEEESCCCHHHHHHHHHTTCCE---------------------------------------
T ss_pred ecccHHHHHHHHHHCCCEEEEEeCCCcHHHHHHHHHcCCHh---------------------------------------
Confidence 45778999999999999999999999999999999999831
Q ss_pred ceEEEechhhhhhcchHHHHhhcCcceEEeecCh--hhHHHHHHHHhHcCCEEEEEcCCccCHHHHhhCCceEEeccCCC
Q 001010 755 HDLCIGGDCFEMLQQTSAVLRVIPYVKVFARVAP--EQKELILTTFKAVGRMTLMCGDGTNDVGALKQAHVGVALLNAVP 832 (1191)
Q Consensus 755 ~~l~itG~~l~~l~~~~~~~~~l~~~~VfAR~sP--~qK~~iV~~Lq~~g~~V~m~GDG~ND~~ALk~AdVGIAl~~~~~ 832 (1191)
.|....| +--..+++.+.-....++|+||+.||+.|.+.|++++++.++.+
T Consensus 78 ---------------------------~~~~~kp~~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~ag~~~~~~~~~~ 130 (162)
T 2p9j_A 78 ---------------------------IYTGSYKKLEIYEKIKEKYSLKDEEIGFIGDDVVDIEVMKKVGFPVAVRNAVE 130 (162)
T ss_dssp ---------------------------EEECC--CHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCH
T ss_pred ---------------------------hccCCCCCHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCeEEecCccH
Confidence 1111112 21122333332233469999999999999999999999886544
Q ss_pred ccccccCCcccc
Q 001010 833 PTQSGNSSSEAS 844 (1191)
Q Consensus 833 e~~~~asdi~~~ 844 (1191)
+ .++.++.+..
T Consensus 131 ~-~~~~a~~v~~ 141 (162)
T 2p9j_A 131 E-VRKVAVYITQ 141 (162)
T ss_dssp H-HHHHCSEECS
T ss_pred H-HHhhCCEEec
Confidence 3 3334555543
|
| >3fvv_A Uncharacterized protein; unknown function, structural genomics, PSI,MCSG, protein STR initiative, midwest center for structural genomics; 2.10A {Bordetella pertussis} | Back alignment and structure |
|---|
Probab=97.86 E-value=6.2e-05 Score=80.48 Aligned_cols=105 Identities=14% Similarity=0.186 Sum_probs=74.8
Q ss_pred cCCchhHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCcEEEeecCCCceeeecCCCccccccCChHHHhcccc
Q 001010 674 PIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLTD 753 (1191)
Q Consensus 674 ~lK~da~~~I~~L~~agi~vvMiTGDn~~TA~~VA~~~gI~~~~~~il~~~~~~~~~~w~~~d~~~~~~~~~~~~~~~~~ 753 (1191)
++.|++.+.++.|++.|+++.++||.....+..+++.+|+.. ++.. .+... ++
T Consensus 92 ~~~~g~~~~l~~l~~~g~~~~ivS~~~~~~~~~~~~~~g~~~----~~~~-----~~~~~--~~---------------- 144 (232)
T 3fvv_A 92 SLTVQAVDVVRGHLAAGDLCALVTATNSFVTAPIARAFGVQH----LIAT-----DPEYR--DG---------------- 144 (232)
T ss_dssp GCCHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCCE----EEEC-----EEEEE--TT----------------
T ss_pred hcCHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCE----EEEc-----ceEEE--CC----------------
Confidence 579999999999999999999999999999999999999841 1100 00000 00
Q ss_pred cceEEEechhhhhhcchHHHHhhcCcceEE-eecChhhHHHHHHHHh-HcC------CEEEEEcCCccCHHHHhhCCceE
Q 001010 754 AHDLCIGGDCFEMLQQTSAVLRVIPYVKVF-ARVAPEQKELILTTFK-AVG------RMTLMCGDGTNDVGALKQAHVGV 825 (1191)
Q Consensus 754 ~~~l~itG~~l~~l~~~~~~~~~l~~~~Vf-AR~sP~qK~~iV~~Lq-~~g------~~V~m~GDG~ND~~ALk~AdVGI 825 (1191)
..+|+ +. .-..++.|...++.+. +.| ..++|+||+.||.+|++.|++++
T Consensus 145 ----~~~g~-------------------~~~~~~~~~~K~~~~~~~~~~~~~~~~~~~~~~~vGDs~~D~~~~~~ag~~~ 201 (232)
T 3fvv_A 145 ----RYTGR-------------------IEGTPSFREGKVVRVNQWLAGMGLALGDFAESYFYSDSVNDVPLLEAVTRPI 201 (232)
T ss_dssp ----EEEEE-------------------EESSCSSTHHHHHHHHHHHHHTTCCGGGSSEEEEEECCGGGHHHHHHSSEEE
T ss_pred ----EEeee-------------------ecCCCCcchHHHHHHHHHHHHcCCCcCchhheEEEeCCHhhHHHHHhCCCeE
Confidence 01111 11 1122466777665543 345 58999999999999999999999
Q ss_pred Eec
Q 001010 826 ALL 828 (1191)
Q Consensus 826 Al~ 828 (1191)
++.
T Consensus 202 ~~~ 204 (232)
T 3fvv_A 202 AAN 204 (232)
T ss_dssp EES
T ss_pred EEC
Confidence 985
|
| >1y8a_A Hypothetical protein AF1437; structural genomics, protein structu initiative, PSI, midwest center for structural genomics; 1.40A {Archaeoglobus fulgidus} SCOP: c.108.1.24 | Back alignment and structure |
|---|
Probab=97.84 E-value=1.8e-05 Score=90.57 Aligned_cols=147 Identities=12% Similarity=0.090 Sum_probs=83.9
Q ss_pred cCCchhHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCcEEEeecCCCceeeecCCCccccccCChHHHhcccc
Q 001010 674 PIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLTD 753 (1191)
Q Consensus 674 ~lK~da~~~I~~L~~agi~vvMiTGDn~~TA~~VA~~~gI~~~~~~il~~~~~~~~~~w~~~d~~~~~~~~~~~~~~~~~ 753 (1191)
++++++.++++.|++ |+.+.++|||+...+..+++.+++.. .+..... . .++ .... ..+.+
T Consensus 103 ~~~~~~~~~l~~l~~-g~~~~i~t~~~~~~~~~~~~~~~~~~---~~~~~~~-----~---~~~---~~~~-~~~~k--- 163 (332)
T 1y8a_A 103 KFVPDAEKAMATLQE-RWTPVVISTSYTQYLRRTASMIGVRG---ELHGTEV-----D---FDS---IAVP-EGLRE--- 163 (332)
T ss_dssp CBCTTHHHHHHHHHT-TCEEEEEEEEEHHHHHHHHHHTTCCS---EEEEEBC-----C---GGG---CCCC-HHHHH---
T ss_pred CCHHHHHHHHHHHHc-CCcEEEEECCceEEEcccchhhhhhh---hhccccc-----c---hhh---hccc-cccce---
Confidence 679999999999999 99999999999777777888887741 1111000 0 000 0000 00000
Q ss_pred cceEEEech--hhhhhcchHHH---HhhcCcc--eEEe---ec-ChhhHHHHHHHHhHcC--CEEEEEcCCccCHHHHhh
Q 001010 754 AHDLCIGGD--CFEMLQQTSAV---LRVIPYV--KVFA---RV-APEQKELILTTFKAVG--RMTLMCGDGTNDVGALKQ 820 (1191)
Q Consensus 754 ~~~l~itG~--~l~~l~~~~~~---~~~l~~~--~VfA---R~-sP~qK~~iV~~Lq~~g--~~V~m~GDG~ND~~ALk~ 820 (1191)
+.+.++ .+.... .+.+ .+++... ..+. .+ .+.+|...++.+.... +.|+++|||.||++||+.
T Consensus 164 ---~~~~~~~~~~~~~~-~~~l~~~~~~~~~s~~~~~~e~ii~~~g~~K~~al~gi~~~~~~~~via~GDs~NDi~ml~~ 239 (332)
T 1y8a_A 164 ---ELLSIIDVIASLSG-EELFRKLDELFSRSEVRKIVESVKAVGAGEKAKIMRGYCESKGIDFPVVVGDSISDYKMFEA 239 (332)
T ss_dssp ---HHHHHHHHHHHCCH-HHHHHHHHHHHHSHHHHHHHHTCBCCCHHHHHHHHHHHHHHHTCSSCEEEECSGGGHHHHHH
T ss_pred ---eEEecCHHHHhhhh-HHHHHHHHHHHhhcCCCceeeEEecCCCCCHHHHHhccChhhcCceEEEEeCcHhHHHHHHH
Confidence 000000 000000 0000 0000000 0111 11 3568999988776543 569999999999999999
Q ss_pred C----CceEEeccCCCccccccCCccccc
Q 001010 821 A----HVGVALLNAVPPTQSGNSSSEASK 845 (1191)
Q Consensus 821 A----dVGIAl~~~~~e~~~~asdi~~~~ 845 (1191)
| ++|||| ++.++++ +.+|.+..+
T Consensus 240 A~~~~g~~vam-na~~~lk-~~Ad~v~~~ 266 (332)
T 1y8a_A 240 ARGLGGVAIAF-NGNEYAL-KHADVVIIS 266 (332)
T ss_dssp HHHTTCEEEEE-SCCHHHH-TTCSEEEEC
T ss_pred HhhcCCeEEEe-cCCHHHH-hhCcEEecC
Confidence 9 999999 7765554 456655533
|
| >4gxt_A A conserved functionally unknown protein; structural genomics, PSI-biology; 1.82A {Anaerococcus prevotii} | Back alignment and structure |
|---|
Probab=97.84 E-value=2.1e-05 Score=91.76 Aligned_cols=113 Identities=12% Similarity=0.042 Sum_probs=75.9
Q ss_pred cCCchhHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCC---CCCcEEEeecCCCceeeecCCCccccccCChHHHhc
Q 001010 674 PIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIV---TKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEG 750 (1191)
Q Consensus 674 ~lK~da~~~I~~L~~agi~vvMiTGDn~~TA~~VA~~~gI~---~~~~~il~~~~~~~~~~w~~~d~~~~~~~~~~~~~~ 750 (1191)
.++|++++.|+.|++.|++|+||||.....+..+|+++|+. +.+.++-. .+.+.. +
T Consensus 221 r~~p~~~eLi~~L~~~G~~v~IVSgg~~~~v~~ia~~lg~~y~ip~~~Vig~------~l~~~~-d-------------- 279 (385)
T 4gxt_A 221 RTLDEMVDLYRSLEENGIDCYIVSASFIDIVRAFATDTNNNYKMKEEKVLGL------RLMKDD-E-------------- 279 (385)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHCTTSSCCCCGGGEEEE------CEEECT-T--------------
T ss_pred eeCHHHHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHhCcccCCCcceEEEe------EEEEec-C--------------
Confidence 47899999999999999999999999999999999999874 22222211 001000 0
Q ss_pred ccccceEEEechhhhhhcchHHHHhhcCcceEEeecChhhHHHHHHHHhHc--C-CEEEEEcCCccCHHHHhh-CCceEE
Q 001010 751 LTDAHDLCIGGDCFEMLQQTSAVLRVIPYVKVFARVAPEQKELILTTFKAV--G-RMTLMCGDGTNDVGALKQ-AHVGVA 826 (1191)
Q Consensus 751 ~~~~~~l~itG~~l~~l~~~~~~~~~l~~~~VfAR~sP~qK~~iV~~Lq~~--g-~~V~m~GDG~ND~~ALk~-AdVGIA 826 (1191)
=.++|+.-. .. --+..+.|...|+.+-+. | ..++++|||.||.+||++ +|.|++
T Consensus 280 ------G~~tg~~~~--------------~~--p~~~~~gK~~~i~~~~~~~~~~~~i~a~GDs~~D~~ML~~~~~~~~~ 337 (385)
T 4gxt_A 280 ------GKILPKFDK--------------DF--PISIREGKVQTINKLIKNDRNYGPIMVGGDSDGDFAMLKEFDHTDLS 337 (385)
T ss_dssp ------CCEEEEECT--------------TS--CCCSTHHHHHHHHHHTCCTTEECCSEEEECSGGGHHHHHHCTTCSEE
T ss_pred ------CceeeeecC--------------cc--ceeCCCchHHHHHHHHHhcCCCCcEEEEECCHhHHHHHhcCccCceE
Confidence 001111000 00 012457799999887432 2 247889999999999997 788877
Q ss_pred ecc
Q 001010 827 LLN 829 (1191)
Q Consensus 827 l~~ 829 (1191)
+.-
T Consensus 338 lii 340 (385)
T 4gxt_A 338 LII 340 (385)
T ss_dssp EEE
T ss_pred EEE
Confidence 764
|
| >2zos_A MPGP, mannosyl-3-phosphoglycerate phosphatase; haloacid dehalogenase like hydrolase, mannosylglycerate, cytoplasm, hydrolase, magnesium; 1.70A {Pyrococcus horikoshii} PDB: 1wzc_A | Back alignment and structure |
|---|
Probab=97.84 E-value=6.3e-05 Score=82.25 Aligned_cols=55 Identities=15% Similarity=0.038 Sum_probs=43.0
Q ss_pred hhHHHHHHHHhHc----C-CEEEEEcCCccCHHHHhhCCceEEeccCCCccccccCCccc
Q 001010 789 EQKELILTTFKAV----G-RMTLMCGDGTNDVGALKQAHVGVALLNAVPPTQSGNSSSEA 843 (1191)
Q Consensus 789 ~qK~~iV~~Lq~~----g-~~V~m~GDG~ND~~ALk~AdVGIAl~~~~~e~~~~asdi~~ 843 (1191)
-.|..-++.|.+. + ..|+++|||.||.+||+.|++||||+++..+..++.++.+.
T Consensus 178 ~sKg~al~~l~~~~~~~~~~~viafGD~~NDi~Ml~~ag~~va~gna~~~~~~~~a~~v~ 237 (249)
T 2zos_A 178 SDKGKAAKILLDFYKRLGQIESYAVGDSYNDFPMFEVVDKVFIVGSLKHKKAQNVSSIID 237 (249)
T ss_dssp CCHHHHHHHHHHHHHTTSCEEEEEEECSGGGHHHHTTSSEEEEESSCCCTTEEEESSHHH
T ss_pred CChHHHHHHHHHHhccCCCceEEEECCCcccHHHHHhCCcEEEeCCCCccccchhceEEe
Confidence 3588888877653 3 47999999999999999999999999987443344556554
|
| >4ex6_A ALNB; modified rossman fold, phosphatase, magnesium binding, hydro; 1.25A {Streptomyces SP} PDB: 4ex7_A | Back alignment and structure |
|---|
Probab=97.76 E-value=2e-05 Score=84.39 Aligned_cols=116 Identities=18% Similarity=0.167 Sum_probs=78.9
Q ss_pred CcCCchhHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCcEEEeecCCCceeeecCCCccccccCChHHHhccc
Q 001010 673 CPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLT 752 (1191)
Q Consensus 673 d~lK~da~~~I~~L~~agi~vvMiTGDn~~TA~~VA~~~gI~~~~~~il~~~~~~~~~~w~~~d~~~~~~~~~~~~~~~~ 752 (1191)
.++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+...-
T Consensus 103 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f----------------------------------- 147 (237)
T 4ex6_A 103 RLLYPGVLEGLDRLSAAGFRLAMATSKVEKAARAIAELTGLDTRL----------------------------------- 147 (237)
T ss_dssp GGBCTTHHHHHHHHHHTTEEEEEECSSCHHHHHHHHHHHTGGGTC-----------------------------------
T ss_pred CccCCCHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCchhhe-----------------------------------
Confidence 457899999999999999999999999999999999999974211
Q ss_pred ccceEEEechhhhhhcchHHHHhhcCcceEEeecChhhHHHHHHHHhHcCCEEEEEcCCccCHHHHhhCCc---eEEecc
Q 001010 753 DAHDLCIGGDCFEMLQQTSAVLRVIPYVKVFARVAPEQKELILTTFKAVGRMTLMCGDGTNDVGALKQAHV---GVALLN 829 (1191)
Q Consensus 753 ~~~~l~itG~~l~~l~~~~~~~~~l~~~~VfAR~sP~qK~~iV~~Lq~~g~~V~m~GDG~ND~~ALk~AdV---GIAl~~ 829 (1191)
+.+++++... ...-.|+--..+++.+.-....++|+||+.||+.|+++|++ ||++++
T Consensus 148 ---~~~~~~~~~~-----------------~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~v~~g~ 207 (237)
T 4ex6_A 148 ---TVIAGDDSVE-----------------RGKPHPDMALHVARGLGIPPERCVVIGDGVPDAEMGRAAGMTVIGVSYGV 207 (237)
T ss_dssp ---SEEECTTTSS-----------------SCTTSSHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHTTCEEEEESSSS
T ss_pred ---eeEEeCCCCC-----------------CCCCCHHHHHHHHHHcCCCHHHeEEEcCCHHHHHHHHHCCCeEEEEecCC
Confidence 1122221100 01112333334444444444579999999999999999999 888886
Q ss_pred CCCcc-ccccCCccc
Q 001010 830 AVPPT-QSGNSSSEA 843 (1191)
Q Consensus 830 ~~~e~-~~~asdi~~ 843 (1191)
+..+. .+..++.+.
T Consensus 208 ~~~~~~~~~~ad~v~ 222 (237)
T 4ex6_A 208 SGPDELMRAGADTVV 222 (237)
T ss_dssp SCHHHHHHTTCSEEE
T ss_pred CCHHHHHhcCCCEEE
Confidence 54333 333455544
|
| >1wr8_A Phosphoglycolate phosphatase; alpha / beta core domain, HAD superfamily, structural genomi structural genomics/proteomics initiative, RSGI; 1.60A {Pyrococcus horikoshii} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=97.74 E-value=9.1e-05 Score=79.89 Aligned_cols=159 Identities=15% Similarity=0.113 Sum_probs=90.5
Q ss_pred CcCCchhHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCcEEEeecCC----CceeeecCCCccccccCChHHH
Q 001010 673 CPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLILCPVKN----GKVYEWVSPDETEKIQYSEKEV 748 (1191)
Q Consensus 673 d~lK~da~~~I~~L~~agi~vvMiTGDn~~TA~~VA~~~gI~~~~~~il~~~~~----~~~~~w~~~d~~~~~~~~~~~~ 748 (1191)
..+.+.+.++|++|++.|++++++||.....+..+.+++|+.. ..+. .++. .....|... + -...++
T Consensus 19 ~~i~~~~~~al~~l~~~G~~v~i~TGR~~~~~~~~~~~l~~~~--~~i~-~nGa~i~~~~~~~~~~~-----l-~~~~~i 89 (231)
T 1wr8_A 19 RMIHEKALEAIRRAESLGIPIMLVTGNTVQFAEAASILIGTSG--PVVA-EDGGAISYKKKRIFLAS-----M-DEEWIL 89 (231)
T ss_dssp SCBCHHHHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHHTCCS--CEEE-GGGTEEEETTEEEESCC-----C-SHHHHH
T ss_pred CcCCHHHHHHHHHHHHCCCEEEEEcCCChhHHHHHHHHcCCCC--eEEE-eCCcEEEeCCEEEEecc-----H-HHHHHH
Confidence 3567889999999999999999999999999999999998742 1222 1100 011111110 0 000000
Q ss_pred hcccc-cc--------------eEEEec--hhhhhhcchHHHHhhcC-cceEE-----eecCh--hhHHHHHHHHhH-cC
Q 001010 749 EGLTD-AH--------------DLCIGG--DCFEMLQQTSAVLRVIP-YVKVF-----ARVAP--EQKELILTTFKA-VG 802 (1191)
Q Consensus 749 ~~~~~-~~--------------~l~itG--~~l~~l~~~~~~~~~l~-~~~Vf-----AR~sP--~qK~~iV~~Lq~-~g 802 (1191)
.+... .+ ++.+.+ ..-+.+ ..+.+.+. ...+. ....| ..|...++.+.+ .|
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~ei~~~~~~K~~~~~~~~~~~~ 166 (231)
T 1wr8_A 90 WNEIRKRFPNARTSYTMPDRRAGLVIMRETINVETV---REIINELNLNLVAVDSGFAIHVKKPWINKGSGIEKASEFLG 166 (231)
T ss_dssp HHHHHHHCTTCCBCTTGGGCSSCEEECTTTSCHHHH---HHHHHHTTCSCEEEECSSCEEEECTTCCHHHHHHHHHHHHT
T ss_pred HHHHHHhCCCceEEecCCCceeeEEEECCCCCHHHH---HHHHHhcCCcEEEEecCcEEEEecCCCChHHHHHHHHHHcC
Confidence 00000 00 112222 010110 11111121 23332 22223 368888877654 33
Q ss_pred ---CEEEEEcCCccCHHHHhhCCceEEeccCCCccccccCCcccc
Q 001010 803 ---RMTLMCGDGTNDVGALKQAHVGVALLNAVPPTQSGNSSSEAS 844 (1191)
Q Consensus 803 ---~~V~m~GDG~ND~~ALk~AdVGIAl~~~~~e~~~~asdi~~~ 844 (1191)
..++|+||+.||.+|++.|++|++|+++.++.+ +.++.+..
T Consensus 167 ~~~~~~~~iGD~~nD~~~~~~ag~~v~~~~~~~~~~-~~a~~v~~ 210 (231)
T 1wr8_A 167 IKPKEVAHVGDGENDLDAFKVVGYKVAVAQAPKILK-ENADYVTK 210 (231)
T ss_dssp SCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHH-TTCSEECS
T ss_pred CCHHHEEEECCCHHHHHHHHHcCCeEEecCCCHHHH-hhCCEEec
Confidence 469999999999999999999999998766554 45555543
|
| >1te2_A Putative phosphatase; structural genomics, phosphates, PSI, protein S initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Escherichia coli} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=97.72 E-value=0.00011 Score=77.28 Aligned_cols=100 Identities=9% Similarity=0.027 Sum_probs=69.4
Q ss_pred cCCchhHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCcEEEeecCCCceeeecCCCccccccCChHHHhcccc
Q 001010 674 PIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLTD 753 (1191)
Q Consensus 674 ~lK~da~~~I~~L~~agi~vvMiTGDn~~TA~~VA~~~gI~~~~~~il~~~~~~~~~~w~~~d~~~~~~~~~~~~~~~~~ 753 (1191)
++.+++.+.++.|++.|++++++|+.....+..+.+..|+...-.
T Consensus 94 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~~~~~~~----------------------------------- 138 (226)
T 1te2_A 94 PLLPGVREAVALCKEQGLLVGLASASPLHMLEKVLTMFDLRDSFD----------------------------------- 138 (226)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCS-----------------------------------
T ss_pred CcCccHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhcCcHhhCc-----------------------------------
Confidence 567899999999999999999999999888888888888742111
Q ss_pred cceEEEechhhhhhcchHHHHhhcCcceEEeecChhhHHHHHHHHhHcCCEEEEEcCCccCHHHHhhCCceEEec
Q 001010 754 AHDLCIGGDCFEMLQQTSAVLRVIPYVKVFARVAPEQKELILTTFKAVGRMTLMCGDGTNDVGALKQAHVGVALL 828 (1191)
Q Consensus 754 ~~~l~itG~~l~~l~~~~~~~~~l~~~~VfAR~sP~qK~~iV~~Lq~~g~~V~m~GDG~ND~~ALk~AdVGIAl~ 828 (1191)
..++++... ...-.|+--..+.+.+.-....++++||+.||+.|++.|++++++-
T Consensus 139 ---~~~~~~~~~-----------------~~kp~~~~~~~~~~~~~i~~~~~i~iGD~~nDi~~a~~aG~~~~~~ 193 (226)
T 1te2_A 139 ---ALASAEKLP-----------------YSKPHPQVYLDCAAKLGVDPLTCVALEDSVNGMIASKAARMRSIVV 193 (226)
T ss_dssp ---EEEECTTSS-----------------CCTTSTHHHHHHHHHHTSCGGGEEEEESSHHHHHHHHHTTCEEEEC
T ss_pred ---EEEeccccC-----------------CCCCChHHHHHHHHHcCCCHHHeEEEeCCHHHHHHHHHcCCEEEEE
Confidence 111111000 0001133333444444433456999999999999999999999994
|
| >3kd3_A Phosphoserine phosphohydrolase-like protein; csgid, niaid, S genomics, national institute of allergy and infectious DISE (niaid); 1.70A {Francisella tularensis subsp} | Back alignment and structure |
|---|
Probab=97.65 E-value=4e-05 Score=80.36 Aligned_cols=109 Identities=14% Similarity=0.147 Sum_probs=72.3
Q ss_pred cCCchhHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCcEEEeecCCCceeeecCCCccccccCChHHHhcccc
Q 001010 674 PIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLTD 753 (1191)
Q Consensus 674 ~lK~da~~~I~~L~~agi~vvMiTGDn~~TA~~VA~~~gI~~~~~~il~~~~~~~~~~w~~~d~~~~~~~~~~~~~~~~~ 753 (1191)
.+.|++.+.++.|++.|+++.++||.....+..+.+.+|+......-.
T Consensus 82 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~~~~~~~~~~~~~~~-------------------------------- 129 (219)
T 3kd3_A 82 LLTDGIKELVQDLKNKGFEIWIFSGGLSESIQPFADYLNIPRENIFAV-------------------------------- 129 (219)
T ss_dssp TBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCCGGGEEEE--------------------------------
T ss_pred cCChhHHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHcCCCcccEEEe--------------------------------
Confidence 378999999999999999999999999999999999999842110000
Q ss_pred cceEEEechhhhhhcchHHHHhhcCcceEEeecChhhHHHHHHHH-hHcCCEEEEEcCCccCHHHHhh--CCceEEecc
Q 001010 754 AHDLCIGGDCFEMLQQTSAVLRVIPYVKVFARVAPEQKELILTTF-KAVGRMTLMCGDGTNDVGALKQ--AHVGVALLN 829 (1191)
Q Consensus 754 ~~~l~itG~~l~~l~~~~~~~~~l~~~~VfAR~sP~qK~~iV~~L-q~~g~~V~m~GDG~ND~~ALk~--AdVGIAl~~ 829 (1191)
.+..+++.. + ........+|..|...+..+ .-....++|+||+.||..|+++ +.+|++.+.
T Consensus 130 --~~~~~~~~~--~-----------~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~vGD~~~Di~~~~~G~~~~~v~~~~ 193 (219)
T 3kd3_A 130 --ETIWNSDGS--F-----------KELDNSNGACDSKLSAFDKAKGLIDGEVIAIGDGYTDYQLYEKGYATKFIAYME 193 (219)
T ss_dssp --EEEECTTSB--E-----------EEEECTTSTTTCHHHHHHHHGGGCCSEEEEEESSHHHHHHHHHTSCSEEEEECS
T ss_pred --eeeecCCCc--e-----------eccCCCCCCcccHHHHHHHHhCCCCCCEEEEECCHhHHHHHhCCCCcEEEeccC
Confidence 000000000 0 00011233566777777655 4356789999999999999976 335555553
|
| >3mc1_A Predicted phosphatase, HAD family; PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.93A {Clostridium acetobutylicum} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=97.64 E-value=3.9e-05 Score=81.31 Aligned_cols=116 Identities=13% Similarity=0.111 Sum_probs=77.2
Q ss_pred CcCCchhHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCcEEEeecCCCceeeecCCCccccccCChHHHhccc
Q 001010 673 CPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLT 752 (1191)
Q Consensus 673 d~lK~da~~~I~~L~~agi~vvMiTGDn~~TA~~VA~~~gI~~~~~~il~~~~~~~~~~w~~~d~~~~~~~~~~~~~~~~ 752 (1191)
.++.|++.+.++.|++.|+++.++|+.....+..+.+..|+...-
T Consensus 85 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f----------------------------------- 129 (226)
T 3mc1_A 85 NKVYDGIEALLSSLKDYGFHLVVATSKPTVFSKQILEHFKLAFYF----------------------------------- 129 (226)
T ss_dssp CCBCTTHHHHHHHHHHHTCEEEEEEEEEHHHHHHHHHHTTCGGGC-----------------------------------
T ss_pred CccCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhCCHhhe-----------------------------------
Confidence 467899999999999999999999999999999999999884211
Q ss_pred ccceEEEechhhhhhcchHHHHhhcCcceEEeecChhhHHHHHHHHhHcCCEEEEEcCCccCHHHHhhCCc---eEEecc
Q 001010 753 DAHDLCIGGDCFEMLQQTSAVLRVIPYVKVFARVAPEQKELILTTFKAVGRMTLMCGDGTNDVGALKQAHV---GVALLN 829 (1191)
Q Consensus 753 ~~~~l~itG~~l~~l~~~~~~~~~l~~~~VfAR~sP~qK~~iV~~Lq~~g~~V~m~GDG~ND~~ALk~AdV---GIAl~~ 829 (1191)
+.+++++.... ..-.|+--..+.+.+.-....++|+||+.||+.|++.|++ ||++++
T Consensus 130 ---~~~~~~~~~~~-----------------~kp~~~~~~~~~~~lgi~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~g~ 189 (226)
T 3mc1_A 130 ---DAIVGSSLDGK-----------------LSTKEDVIRYAMESLNIKSDDAIMIGDREYDVIGALKNNLPSIGVTYGF 189 (226)
T ss_dssp ---SEEEEECTTSS-----------------SCSHHHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHTTTCCEEEESSSS
T ss_pred ---eeeeccCCCCC-----------------CCCCHHHHHHHHHHhCcCcccEEEECCCHHHHHHHHHCCCCEEEEccCC
Confidence 11112111000 0001222223333333233479999999999999999999 888776
Q ss_pred CCCccc-cccCCccc
Q 001010 830 AVPPTQ-SGNSSSEA 843 (1191)
Q Consensus 830 ~~~e~~-~~asdi~~ 843 (1191)
+..+.. +..+|.+.
T Consensus 190 ~~~~~~~~~~ad~v~ 204 (226)
T 3mc1_A 190 GSYEELKNAGANYIV 204 (226)
T ss_dssp SCHHHHHHHTCSEEE
T ss_pred CCHHHHHHcCCCEEE
Confidence 554443 44555554
|
| >2b30_A Pvivax hypothetical protein; SGPP, structural genomics, PSI, protein structure initiative; 2.70A {Plasmodium vivax} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=97.63 E-value=0.00016 Score=81.40 Aligned_cols=53 Identities=21% Similarity=0.237 Sum_probs=42.5
Q ss_pred hHHHHHHHHhHc-C---CEEEEEcCCccCHHHHhhCCceEEeccCCCccccccCCccc
Q 001010 790 QKELILTTFKAV-G---RMTLMCGDGTNDVGALKQAHVGVALLNAVPPTQSGNSSSEA 843 (1191)
Q Consensus 790 qK~~iV~~Lq~~-g---~~V~m~GDG~ND~~ALk~AdVGIAl~~~~~e~~~~asdi~~ 843 (1191)
.|...++.|.+. | ..|+++||+.||.+|++.|++||+|+++.+++++ .++.+.
T Consensus 224 ~K~~~l~~l~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~va~~na~~~~k~-~a~~v~ 280 (301)
T 2b30_A 224 DKYTGINYLLKHYNISNDQVLVVGDAENDIAMLSNFKYSFAVANATDSAKS-HAKCVL 280 (301)
T ss_dssp CHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHSCSEEEECTTCCHHHHH-HSSEEC
T ss_pred CcHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCCeEEEcCCcHHHHh-hCCEEE
Confidence 799888887653 4 3699999999999999999999999988766554 455444
|
| >2hsz_A Novel predicted phosphatase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: UNL; 1.90A {Haemophilus somnus 129PT} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=97.61 E-value=0.00011 Score=79.72 Aligned_cols=100 Identities=19% Similarity=0.197 Sum_probs=70.3
Q ss_pred CcCCchhHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCcEEEeecCCCceeeecCCCccccccCChHHHhccc
Q 001010 673 CPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLT 752 (1191)
Q Consensus 673 d~lK~da~~~I~~L~~agi~vvMiTGDn~~TA~~VA~~~gI~~~~~~il~~~~~~~~~~w~~~d~~~~~~~~~~~~~~~~ 752 (1191)
.++.|++.++++.|++.|+++.++|+.+...+..+.+.+|+...
T Consensus 113 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~gl~~~------------------------------------ 156 (243)
T 2hsz_A 113 SRLYPNVKETLEALKAQGYILAVVTNKPTKHVQPILTAFGIDHL------------------------------------ 156 (243)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGG------------------------------------
T ss_pred CccCCCHHHHHHHHHHCCCEEEEEECCcHHHHHHHHHHcCchhe------------------------------------
Confidence 46789999999999999999999999999999999999998421
Q ss_pred ccceEEEechhhhhhcchHHHHhhcCcceEEeecChhhHHHHHHHHhHcCCEEEEEcCCccCHHHHhhCCceEEe
Q 001010 753 DAHDLCIGGDCFEMLQQTSAVLRVIPYVKVFARVAPEQKELILTTFKAVGRMTLMCGDGTNDVGALKQAHVGVAL 827 (1191)
Q Consensus 753 ~~~~l~itG~~l~~l~~~~~~~~~l~~~~VfAR~sP~qK~~iV~~Lq~~g~~V~m~GDG~ND~~ALk~AdVGIAl 827 (1191)
++..++++.... ..-.|+--..+++.+.-....++|+||+.||+.|++.|++++..
T Consensus 157 --f~~~~~~~~~~~-----------------~Kp~~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~aG~~~i~ 212 (243)
T 2hsz_A 157 --FSEMLGGQSLPE-----------------IKPHPAPFYYLCGKFGLYPKQILFVGDSQNDIFAAHSAGCAVVG 212 (243)
T ss_dssp --CSEEECTTTSSS-----------------CTTSSHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHHTCEEEE
T ss_pred --EEEEEecccCCC-----------------CCcCHHHHHHHHHHhCcChhhEEEEcCCHHHHHHHHHCCCeEEE
Confidence 111122211000 00123333444555543445799999999999999999998554
|
| >1nf2_A Phosphatase; structural proteomics, HAD NEW fold, structural genomics, BSGC structure funded by NIH structure initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=97.61 E-value=0.00022 Score=78.62 Aligned_cols=41 Identities=10% Similarity=0.103 Sum_probs=37.2
Q ss_pred CcCCchhHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCC
Q 001010 673 CPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIV 714 (1191)
Q Consensus 673 d~lK~da~~~I~~L~~agi~vvMiTGDn~~TA~~VA~~~gI~ 714 (1191)
..+-+.+.++|++ ++.|++++++||.....+..+.+++|+.
T Consensus 18 ~~i~~~~~~al~~-~~~Gi~v~iaTGR~~~~~~~~~~~l~~~ 58 (268)
T 1nf2_A 18 LEISEKDRRNIEK-LSRKCYVVFASGRMLVSTLNVEKKYFKR 58 (268)
T ss_dssp SCCCHHHHHHHHH-HTTTSEEEEECSSCHHHHHHHHHHHSSS
T ss_pred CccCHHHHHHHHH-HhCCCEEEEECCCChHHHHHHHHHhCCC
Confidence 3567889999999 9999999999999999999999999873
|
| >3e58_A Putative beta-phosphoglucomutase; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.86A {Streptococcus thermophilus lmg 18311} | Back alignment and structure |
|---|
Probab=97.55 E-value=0.00018 Score=74.77 Aligned_cols=103 Identities=17% Similarity=0.200 Sum_probs=73.4
Q ss_pred cCCchhHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCcEEEeecCCCceeeecCCCccccccCChHHHhcccc
Q 001010 674 PIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLTD 753 (1191)
Q Consensus 674 ~lK~da~~~I~~L~~agi~vvMiTGDn~~TA~~VA~~~gI~~~~~~il~~~~~~~~~~w~~~d~~~~~~~~~~~~~~~~~ 753 (1191)
++.|++.+.++.|++.|+++.++|+.....+..+.+..|+...-
T Consensus 89 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f------------------------------------ 132 (214)
T 3e58_A 89 LIFPDVLKVLNEVKSQGLEIGLASSSVKADIFRALEENRLQGFF------------------------------------ 132 (214)
T ss_dssp HBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGC------------------------------------
T ss_pred CcCchHHHHHHHHHHCCCCEEEEeCCcHHHHHHHHHHcCcHhhe------------------------------------
Confidence 56899999999999999999999999999999999999985211
Q ss_pred cceEEEechhhhhhcchHHHHhhcCcceEEeecChhhHHHHHHHHhHcCCEEEEEcCCccCHHHHhhCCceEEeccCC
Q 001010 754 AHDLCIGGDCFEMLQQTSAVLRVIPYVKVFARVAPEQKELILTTFKAVGRMTLMCGDGTNDVGALKQAHVGVALLNAV 831 (1191)
Q Consensus 754 ~~~l~itG~~l~~l~~~~~~~~~l~~~~VfAR~sP~qK~~iV~~Lq~~g~~V~m~GDG~ND~~ALk~AdVGIAl~~~~ 831 (1191)
+.+++++... ...-.|+--..+++.+.-....++|+||+.||+.|.+.|++++.+.+.+
T Consensus 133 --~~~~~~~~~~-----------------~~kp~~~~~~~~~~~~~~~~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~ 191 (214)
T 3e58_A 133 --DIVLSGEEFK-----------------ESKPNPEIYLTALKQLNVQASRALIIEDSEKGIAAGVAADVEVWAIRDN 191 (214)
T ss_dssp --SEEEEGGGCS-----------------SCTTSSHHHHHHHHHHTCCGGGEEEEECSHHHHHHHHHTTCEEEEECCS
T ss_pred --eeEeeccccc-----------------CCCCChHHHHHHHHHcCCChHHeEEEeccHhhHHHHHHCCCEEEEECCC
Confidence 1122222110 0011233333444444433456999999999999999999999888754
|
| >1u02_A Trehalose-6-phosphate phosphatase related protein; structural genomics, PSI; 1.92A {Thermoplasma acidophilum} SCOP: c.108.1.15 | Back alignment and structure |
|---|
Probab=97.55 E-value=0.00017 Score=78.25 Aligned_cols=149 Identities=11% Similarity=0.107 Sum_probs=81.8
Q ss_pred cCCchhHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHc-CCC-CCCcEEEeecCCCceeeecCCCccccccCChHHHh--
Q 001010 674 PIREDSAKILSELKNSSQDLAMITGDQALTACYVASQV-HIV-TKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVE-- 749 (1191)
Q Consensus 674 ~lK~da~~~I~~L~~agi~vvMiTGDn~~TA~~VA~~~-gI~-~~~~~il~~~~~~~~~~w~~~d~~~~~~~~~~~~~-- 749 (1191)
.+-+.++++|++|++.| +++++||.....+..+.+++ .++ .+...+.. + ..+.|... .....+++.+...
T Consensus 23 ~i~~~~~~al~~l~~~g-~v~iaTGR~~~~~~~~~~~l~~~I~~nGa~i~~---~-~~~~~~~~-~~~~~~l~~~~~~~i 96 (239)
T 1u02_A 23 YADAGLLSLISDLKERF-DTYIVTGRSPEEISRFLPLDINMICYHGACSKI---N-GQIVYNNG-SDRFLGVFDRIYEDT 96 (239)
T ss_dssp CCCHHHHHHHHHHHHHS-EEEEECSSCHHHHHHHSCSSCEEEEGGGTEEEE---T-TEEEECTT-GGGGHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHhcCC-CEEEEeCCCHHHHHHHhccchheEEECCEEEee---C-Ceeeeccc-ccccchhhHHHHHHH
Confidence 56789999999999999 99999999999998887765 111 11222221 1 11211100 0000111111111
Q ss_pred -cccccc-eEEEechh---------hhhhcch--HH----HHhhcCcceE-----EeecChh--hHHHHHHHHhHcCCEE
Q 001010 750 -GLTDAH-DLCIGGDC---------FEMLQQT--SA----VLRVIPYVKV-----FARVAPE--QKELILTTFKAVGRMT 805 (1191)
Q Consensus 750 -~~~~~~-~l~itG~~---------l~~l~~~--~~----~~~~l~~~~V-----fAR~sP~--qK~~iV~~Lq~~g~~V 805 (1191)
+..... .+.+.++. .....+. .. +.+. ....+ +-.+.|. .|..-++.|.+.-. |
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~lei~~~~~~Kg~al~~l~~~~g-v 174 (239)
T 1u02_A 97 RSWVSDFPGLRIYRKNLAVLYHLGLMGADMKPKLRSRIEEIARI-FGVETYYGKMIIELRVPGVNKGSAIRSVRGERP-A 174 (239)
T ss_dssp TTHHHHSTTCEEEEETTEEEEECTTSCSTTHHHHHHHHHHHHHH-HTCEEEECSSEEEEECTTCCHHHHHHHHHTTSC-E
T ss_pred HHHHhhCCCcEEEecCCEEEEEcCCCChhHHHHHHHHHHHHhcc-CCcEEEeCCcEEEEEcCCCCHHHHHHHHHhhCC-e
Confidence 100000 11111110 0000000 01 1111 12222 2234454 79999999887533 9
Q ss_pred EEEcCCccCHHHHhhC--CceEEeccC
Q 001010 806 LMCGDGTNDVGALKQA--HVGVALLNA 830 (1191)
Q Consensus 806 ~m~GDG~ND~~ALk~A--dVGIAl~~~ 830 (1191)
+++|||.||.+||+.| +.||||+|+
T Consensus 175 ia~GD~~ND~~Ml~~a~~g~~vam~Na 201 (239)
T 1u02_A 175 IIAGDDATDEAAFEANDDALTIKVGEG 201 (239)
T ss_dssp EEEESSHHHHHHHHTTTTSEEEEESSS
T ss_pred EEEeCCCccHHHHHHhhCCcEEEECCC
Confidence 9999999999999999 999999987
|
| >3d6j_A Putative haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343} | Back alignment and structure |
|---|
Probab=97.54 E-value=0.00018 Score=75.54 Aligned_cols=41 Identities=12% Similarity=0.077 Sum_probs=36.5
Q ss_pred cCCchhHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCC
Q 001010 674 PIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIV 714 (1191)
Q Consensus 674 ~lK~da~~~I~~L~~agi~vvMiTGDn~~TA~~VA~~~gI~ 714 (1191)
.+.+++.+.++.|++.|+++.++|++.......+.+..|+.
T Consensus 89 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~~~~~~~~ 129 (225)
T 3d6j_A 89 ILFPDTLPTLTHLKKQGIRIGIISTKYRFRILSFLRNHMPD 129 (225)
T ss_dssp EECTTHHHHHHHHHHHTCEEEEECSSCHHHHHHHHHTSSCT
T ss_pred ccCcCHHHHHHHHHHCCCeEEEEECCCHHHHHHHHHHcCch
Confidence 34689999999999999999999999998888888888874
|
| >1rlm_A Phosphatase; HAD family, rossman fold, hydrolase; 1.90A {Escherichia coli} SCOP: c.108.1.10 PDB: 1rlt_A 1rlo_A* 2hf2_A | Back alignment and structure |
|---|
Probab=97.54 E-value=0.00015 Score=80.03 Aligned_cols=58 Identities=19% Similarity=0.149 Sum_probs=44.1
Q ss_pred hhHHHHHHHHhHc-C---CEEEEEcCCccCHHHHhhCCceEEeccCCCccccccCCcccccc
Q 001010 789 EQKELILTTFKAV-G---RMTLMCGDGTNDVGALKQAHVGVALLNAVPPTQSGNSSSEASKD 846 (1191)
Q Consensus 789 ~qK~~iV~~Lq~~-g---~~V~m~GDG~ND~~ALk~AdVGIAl~~~~~e~~~~asdi~~~~~ 846 (1191)
..|...++.+.+. | ..++++||+.||.+|++.|++||+|+++.++.++.+..++..++
T Consensus 190 ~~K~~~~~~l~~~l~i~~~~~~~~GD~~nD~~m~~~ag~~va~~na~~~~k~~a~~v~~~~~ 251 (271)
T 1rlm_A 190 LHKANGISRLLKRWDLSPQNVVAIGDSGNDAEMLKMARYSFAMGNAAENIKQIARYATDDNN 251 (271)
T ss_dssp CSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHCSEEEECTTCCHHHHHHCSEECCCGG
T ss_pred CChHHHHHHHHHHhCCCHHHEEEECCcHHHHHHHHHcCCeEEeCCccHHHHHhCCeeCcCCC
Confidence 4788888877653 4 36999999999999999999999999887766544433443333
|
| >2wf7_A Beta-PGM, beta-phosphoglucomutase; transition state analogue, haloacid dehalogenase superfamily, isomerase, phosphotransferase; HET: G7P; 1.05A {Lactococcus lactis} PDB: 1o03_A* 1z4n_A* 1z4o_A* 1zol_A 2wf5_A* 2wf6_A* 1o08_A* 2wf8_A* 2wf9_A* 2wfa_A 2whe_A 1lvh_A* 3fm9_A | Back alignment and structure |
|---|
Probab=97.52 E-value=6.9e-05 Score=78.87 Aligned_cols=109 Identities=8% Similarity=0.063 Sum_probs=71.3
Q ss_pred cCCchhHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCcEEEeecCCCceeeecCCCccccccCChHHHhcccc
Q 001010 674 PIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLTD 753 (1191)
Q Consensus 674 ~lK~da~~~I~~L~~agi~vvMiTGDn~~TA~~VA~~~gI~~~~~~il~~~~~~~~~~w~~~d~~~~~~~~~~~~~~~~~ 753 (1191)
++.|++.+.++.|++.|+++.++|++ ..+..+.+.+|+...
T Consensus 91 ~~~~~~~~~l~~l~~~g~~~~i~t~~--~~~~~~l~~~~l~~~------------------------------------- 131 (221)
T 2wf7_A 91 DVYPGILQLLKDLRSNKIKIALASAS--KNGPFLLERMNLTGY------------------------------------- 131 (221)
T ss_dssp GBCTTHHHHHHHHHHTTCEEEECCCC--TTHHHHHHHTTCGGG-------------------------------------
T ss_pred CCCCCHHHHHHHHHHCCCeEEEEcCc--HHHHHHHHHcChHHH-------------------------------------
Confidence 56799999999999999999999998 445667777776421
Q ss_pred cceEEEechhhhhhcchHHHHhhcCcceEEeecC--hhhHHHHHHHHhHcCCEEEEEcCCccCHHHHhhCCceEEeccCC
Q 001010 754 AHDLCIGGDCFEMLQQTSAVLRVIPYVKVFARVA--PEQKELILTTFKAVGRMTLMCGDGTNDVGALKQAHVGVALLNAV 831 (1191)
Q Consensus 754 ~~~l~itG~~l~~l~~~~~~~~~l~~~~VfAR~s--P~qK~~iV~~Lq~~g~~V~m~GDG~ND~~ALk~AdVGIAl~~~~ 831 (1191)
++.+++++.. .+.. |+--..+.+.+.-....++|+||+.||+.|++.|+++++|.++.
T Consensus 132 -f~~~~~~~~~-------------------~~~Kp~~~~~~~~~~~lgi~~~~~i~iGD~~nDi~~a~~aG~~~~~~~~~ 191 (221)
T 2wf7_A 132 -FDAIADPAEV-------------------AASKPAPDIFIAAAHAVGVAPSESIGLEDSQAGIQAIKDSGALPIGVGRP 191 (221)
T ss_dssp -CSEECCTTTS-------------------SSCTTSSHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEESCH
T ss_pred -cceEeccccC-------------------CCCCCChHHHHHHHHHcCCChhHeEEEeCCHHHHHHHHHCCCEEEEECCH
Confidence 0111111110 0111 22223333333323346999999999999999999999999765
Q ss_pred CccccccCCccc
Q 001010 832 PPTQSGNSSSEA 843 (1191)
Q Consensus 832 ~e~~~~asdi~~ 843 (1191)
++.. .++.+.
T Consensus 192 ~~~~--~a~~v~ 201 (221)
T 2wf7_A 192 EDLG--DDIVIV 201 (221)
T ss_dssp HHHC--SSSEEE
T ss_pred HHhc--cccchh
Confidence 5443 445443
|
| >3nas_A Beta-PGM, beta-phosphoglucomutase; PSI, structural genomics, protein structure initiative, NEW research center for structural genomics; 3.00A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=97.49 E-value=0.00017 Score=76.82 Aligned_cols=111 Identities=11% Similarity=0.123 Sum_probs=69.2
Q ss_pred cCCchhHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCcEEEeecCCCceeeecCCCccccccCChHHHhcccc
Q 001010 674 PIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLTD 753 (1191)
Q Consensus 674 ~lK~da~~~I~~L~~agi~vvMiTGDn~~TA~~VA~~~gI~~~~~~il~~~~~~~~~~w~~~d~~~~~~~~~~~~~~~~~ 753 (1191)
++.|++.+.++.|++.|+++.++|+... +..+.+.+|+...
T Consensus 92 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~--~~~~l~~~gl~~~------------------------------------- 132 (233)
T 3nas_A 92 DLLPGIGRLLCQLKNENIKIGLASSSRN--APKILRRLAIIDD------------------------------------- 132 (233)
T ss_dssp GSCTTHHHHHHHHHHTTCEEEECCSCTT--HHHHHHHTTCTTT-------------------------------------
T ss_pred CcCcCHHHHHHHHHHCCCcEEEEcCchh--HHHHHHHcCcHhh-------------------------------------
Confidence 4789999999999999999999999754 6777888887421
Q ss_pred cceEEEechhhhhhcchHHHHhhcCcceEEeecChhhHHHHHHHHhHcCCEEEEEcCCccCHHHHhhCCceEEeccCCCc
Q 001010 754 AHDLCIGGDCFEMLQQTSAVLRVIPYVKVFARVAPEQKELILTTFKAVGRMTLMCGDGTNDVGALKQAHVGVALLNAVPP 833 (1191)
Q Consensus 754 ~~~l~itG~~l~~l~~~~~~~~~l~~~~VfAR~sP~qK~~iV~~Lq~~g~~V~m~GDG~ND~~ALk~AdVGIAl~~~~~e 833 (1191)
++.+++++... ...-.|+-=..+.+.+.-....++|+||+.||+.|.+.|++++++.++.++
T Consensus 133 -f~~i~~~~~~~-----------------~~Kp~~~~~~~~~~~lgi~~~~~i~vGDs~~Di~~a~~aG~~~~~~~~~~~ 194 (233)
T 3nas_A 133 -FHAIVDPTTLA-----------------KGKPDPDIFLTAAAMLDVSPADCAAIEDAEAGISAIKSAGMFAVGVGQGQP 194 (233)
T ss_dssp -CSEECCC--------------------------CCHHHHHHHHHTSCGGGEEEEECSHHHHHHHHHTTCEEEECC----
T ss_pred -cCEEeeHhhCC-----------------CCCCChHHHHHHHHHcCCCHHHEEEEeCCHHHHHHHHHcCCEEEEECCccc
Confidence 11111111100 001112222344444443445799999999999999999999999977655
Q ss_pred cccccCCccc
Q 001010 834 TQSGNSSSEA 843 (1191)
Q Consensus 834 ~~~~asdi~~ 843 (1191)
.. .++.+.
T Consensus 195 ~~--~ad~v~ 202 (233)
T 3nas_A 195 ML--GADLVV 202 (233)
T ss_dssp -----CSEEC
T ss_pred cc--cCCEEe
Confidence 43 444444
|
| >2nyv_A Pgpase, PGP, phosphoglycolate phosphatase; structural genomics, PSI-2, protein structure initiative; 2.10A {Aquifex aeolicus} PDB: 2yy6_A | Back alignment and structure |
|---|
Probab=97.47 E-value=0.0002 Score=76.24 Aligned_cols=103 Identities=20% Similarity=0.196 Sum_probs=72.0
Q ss_pred CcCCchhHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCcEEEeecCCCceeeecCCCccccccCChHHHhccc
Q 001010 673 CPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLT 752 (1191)
Q Consensus 673 d~lK~da~~~I~~L~~agi~vvMiTGDn~~TA~~VA~~~gI~~~~~~il~~~~~~~~~~w~~~d~~~~~~~~~~~~~~~~ 752 (1191)
.++.|++.++++.|++.|+++.++|+.....+..+.+.+|+...-
T Consensus 82 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~~f----------------------------------- 126 (222)
T 2nyv_A 82 TKPYPEIPYTLEALKSKGFKLAVVSNKLEELSKKILDILNLSGYF----------------------------------- 126 (222)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGC-----------------------------------
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCHHHh-----------------------------------
Confidence 467899999999999999999999999999899999999974211
Q ss_pred ccceEEEechhhhhhcchHHHHhhcCcceEEeecChhhHHHHHHHHhHcCCEEEEEcCCccCHHHHhhCCce-EEeccC
Q 001010 753 DAHDLCIGGDCFEMLQQTSAVLRVIPYVKVFARVAPEQKELILTTFKAVGRMTLMCGDGTNDVGALKQAHVG-VALLNA 830 (1191)
Q Consensus 753 ~~~~l~itG~~l~~l~~~~~~~~~l~~~~VfAR~sP~qK~~iV~~Lq~~g~~V~m~GDG~ND~~ALk~AdVG-IAl~~~ 830 (1191)
+.+++++.. ....-.|+--..+++.+.-....++|+||+.||+.|.+.|+++ |++..+
T Consensus 127 ---~~i~~~~~~-----------------~~~Kp~~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~aG~~~i~v~~g 185 (222)
T 2nyv_A 127 ---DLIVGGDTF-----------------GEKKPSPTPVLKTLEILGEEPEKALIVGDTDADIEAGKRAGTKTALALWG 185 (222)
T ss_dssp ---SEEECTTSS-----------------CTTCCTTHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHHTCEEEEETTS
T ss_pred ---eEEEecCcC-----------------CCCCCChHHHHHHHHHhCCCchhEEEECCCHHHHHHHHHCCCeEEEEcCC
Confidence 111111110 0011123333445555543445799999999999999999988 666543
|
| >1nnl_A L-3-phosphoserine phosphatase; PSP, HPSP, phospho-aspartyl, hydrolase; 1.53A {Homo sapiens} SCOP: c.108.1.4 PDB: 1l8l_A* 1l8o_A | Back alignment and structure |
|---|
Probab=97.45 E-value=0.00016 Score=76.88 Aligned_cols=112 Identities=16% Similarity=0.151 Sum_probs=73.7
Q ss_pred CcCCchhHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCcEEEeecCCCceeeecCCCccccccCChHHHhccc
Q 001010 673 CPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLT 752 (1191)
Q Consensus 673 d~lK~da~~~I~~L~~agi~vvMiTGDn~~TA~~VA~~~gI~~~~~~il~~~~~~~~~~w~~~d~~~~~~~~~~~~~~~~ 752 (1191)
.++.|++.++++.|++.|+++.++||.+...+..+.+.+|+... .++-. .+.+. .+
T Consensus 85 ~~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~-~~f~~------~~~~~-~~---------------- 140 (225)
T 1nnl_A 85 PHLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVASKLNIPAT-NVFAN------RLKFY-FN---------------- 140 (225)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCCGG-GEEEE------CEEEC-TT----------------
T ss_pred CCCCccHHHHHHHHHHCCCcEEEEeCChHHHHHHHHHHcCCCcc-cEEee------eEEEc-CC----------------
Confidence 46899999999999999999999999999999999999998420 11100 00000 00
Q ss_pred ccceEEEechhhhhhcchHHHHhhcCcceEEeecChhhHHHHHHHHhH-cC-CEEEEEcCCccCHHHHhhCCceEEecc
Q 001010 753 DAHDLCIGGDCFEMLQQTSAVLRVIPYVKVFARVAPEQKELILTTFKA-VG-RMTLMCGDGTNDVGALKQAHVGVALLN 829 (1191)
Q Consensus 753 ~~~~l~itG~~l~~l~~~~~~~~~l~~~~VfAR~sP~qK~~iV~~Lq~-~g-~~V~m~GDG~ND~~ALk~AdVGIAl~~ 829 (1191)
-.++|... ......+..|-.+++.+.+ .| ..++|+||+.||+.|.++|+++|+++.
T Consensus 141 ----~~~~~~~~-----------------~~~~~~~~~Kp~~~~~~~~~~~~~~~~~vGDs~~Di~~a~~ag~~i~~~~ 198 (225)
T 1nnl_A 141 ----GEYAGFDE-----------------TQPTAESGGKGKVIKLLKEKFHFKKIIMIGDGATDMEACPPADAFIGFGG 198 (225)
T ss_dssp ----SCEEEECT-----------------TSGGGSTTHHHHHHHHHHHHHCCSCEEEEESSHHHHTTTTTSSEEEEECS
T ss_pred ----CcEecCCC-----------------CCcccCCCchHHHHHHHHHHcCCCcEEEEeCcHHhHHHHHhCCeEEEecC
Confidence 00011000 0001112356556655433 34 579999999999999999999888864
|
| >3s6j_A Hydrolase, haloacid dehalogenase-like family; structural genomics, PSI-2; 2.20A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=97.44 E-value=0.00011 Score=77.84 Aligned_cols=42 Identities=12% Similarity=0.071 Sum_probs=38.3
Q ss_pred CcCCchhHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCC
Q 001010 673 CPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIV 714 (1191)
Q Consensus 673 d~lK~da~~~I~~L~~agi~vvMiTGDn~~TA~~VA~~~gI~ 714 (1191)
.++.+++.+.++.|++.|+++.++|+.....+..+.+..|+.
T Consensus 90 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~ 131 (233)
T 3s6j_A 90 IIALPGAVELLETLDKENLKWCIATSGGIDTATINLKALKLD 131 (233)
T ss_dssp CEECTTHHHHHHHHHHTTCCEEEECSSCHHHHHHHHHTTTCC
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEeCCchhhHHHHHHhcchh
Confidence 456799999999999999999999999999999999998885
|
| >1nrw_A Hypothetical protein, haloacid dehalogenase-like hydrolase; structural genomics, PSI, protein structure initiative; 1.70A {Bacillus subtilis} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=97.42 E-value=0.00068 Score=75.52 Aligned_cols=42 Identities=10% Similarity=0.179 Sum_probs=38.0
Q ss_pred CcCCchhHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCC
Q 001010 673 CPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIV 714 (1191)
Q Consensus 673 d~lK~da~~~I~~L~~agi~vvMiTGDn~~TA~~VA~~~gI~ 714 (1191)
..+.+.+.++|++|++.|++++++||.+...+..+.+++|+.
T Consensus 20 ~~i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~ 61 (288)
T 1nrw_A 20 HQVSLENENALRQAQRDGIEVVVSTGRAHFDVMSIFEPLGIK 61 (288)
T ss_dssp SCCCHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHGGGTCC
T ss_pred CccCHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCC
Confidence 456788999999999999999999999999999999998863
|
| >2go7_A Hydrolase, haloacid dehalogenase-like family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.10A {Streptococcus pneumoniae} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=97.41 E-value=0.00022 Score=73.64 Aligned_cols=103 Identities=13% Similarity=0.141 Sum_probs=69.7
Q ss_pred CcCCchhHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCcEEEeecCCCceeeecCCCccccccCChHHHhccc
Q 001010 673 CPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLT 752 (1191)
Q Consensus 673 d~lK~da~~~I~~L~~agi~vvMiTGDn~~TA~~VA~~~gI~~~~~~il~~~~~~~~~~w~~~d~~~~~~~~~~~~~~~~ 752 (1191)
..+.|++.+.++.|++.|+++.++|+++..... ..+.+|+...
T Consensus 84 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~-~~~~~~~~~~------------------------------------ 126 (207)
T 2go7_A 84 VVLMPGAREVLAWADESGIQQFIYTHKGNNAFT-ILKDLGVESY------------------------------------ 126 (207)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEECSSCTHHHH-HHHHHTCGGG------------------------------------
T ss_pred ceeCcCHHHHHHHHHHCCCeEEEEeCCchHHHH-HHHHcCchhh------------------------------------
Confidence 356899999999999999999999999988777 7777776411
Q ss_pred ccceEEEechhhhhhcchHHHHhhcCcceEEeecChhhHHHHHHHHhHcCCEEEEEcCCccCHHHHhhCCce-EEeccCC
Q 001010 753 DAHDLCIGGDCFEMLQQTSAVLRVIPYVKVFARVAPEQKELILTTFKAVGRMTLMCGDGTNDVGALKQAHVG-VALLNAV 831 (1191)
Q Consensus 753 ~~~~l~itG~~l~~l~~~~~~~~~l~~~~VfAR~sP~qK~~iV~~Lq~~g~~V~m~GDG~ND~~ALk~AdVG-IAl~~~~ 831 (1191)
++.+++++... ...-.|+--..+.+.+.-....++++||+.||+.|++.|+++ |++.++.
T Consensus 127 --f~~~~~~~~~~-----------------~~Kp~~~~~~~~~~~~~i~~~~~~~iGD~~nDi~~~~~aG~~~i~~~~~~ 187 (207)
T 2go7_A 127 --FTEILTSQSGF-----------------VRKPSPEAATYLLDKYQLNSDNTYYIGDRTLDVEFAQNSGIQSINFLEST 187 (207)
T ss_dssp --EEEEECGGGCC-----------------CCTTSSHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHHTCEEEESSCCS
T ss_pred --eeeEEecCcCC-----------------CCCCCcHHHHHHHHHhCCCcccEEEECCCHHHHHHHHHCCCeEEEEecCC
Confidence 01111111100 000112222344455543345699999999999999999997 8887664
|
| >3um9_A Haloacid dehalogenase, type II; haloacid dehalogenase-like hydrolase protein superfamily, defluorinase, hydrolase; 2.19A {Polaromonas SP} | Back alignment and structure |
|---|
Probab=97.33 E-value=0.00056 Score=72.35 Aligned_cols=103 Identities=16% Similarity=0.105 Sum_probs=71.6
Q ss_pred CcCCchhHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCcEEEeecCCCceeeecCCCccccccCChHHHhccc
Q 001010 673 CPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLT 752 (1191)
Q Consensus 673 d~lK~da~~~I~~L~~agi~vvMiTGDn~~TA~~VA~~~gI~~~~~~il~~~~~~~~~~w~~~d~~~~~~~~~~~~~~~~ 752 (1191)
.++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+...-
T Consensus 95 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f----------------------------------- 139 (230)
T 3um9_A 95 LTPFADVPQALQQLRAAGLKTAILSNGSRHSIRQVVGNSGLTNSF----------------------------------- 139 (230)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHTCGGGC-----------------------------------
T ss_pred CCCCCCHHHHHHHHHhCCCeEEEEeCCCHHHHHHHHHHCCChhhc-----------------------------------
Confidence 467899999999999999999999999999888888998884211
Q ss_pred ccceEEEechhhhhhcchHHHHhhcCcceEEeecChhhHHHHHHHHhHcCCEEEEEcCCccCHHHHhhCCceEEeccC
Q 001010 753 DAHDLCIGGDCFEMLQQTSAVLRVIPYVKVFARVAPEQKELILTTFKAVGRMTLMCGDGTNDVGALKQAHVGVALLNA 830 (1191)
Q Consensus 753 ~~~~l~itG~~l~~l~~~~~~~~~l~~~~VfAR~sP~qK~~iV~~Lq~~g~~V~m~GDG~ND~~ALk~AdVGIAl~~~ 830 (1191)
+.+++++... ...-.|+--..+.+.+.-....++|+||+.||+.|.++|++++++.+.
T Consensus 140 ---~~~~~~~~~~-----------------~~kp~~~~~~~~~~~~~~~~~~~~~iGD~~~Di~~a~~aG~~~~~~~~ 197 (230)
T 3um9_A 140 ---DHLISVDEVR-----------------LFKPHQKVYELAMDTLHLGESEILFVSCNSWDATGAKYFGYPVCWINR 197 (230)
T ss_dssp ---SEEEEGGGTT-----------------CCTTCHHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHHHTCCEEEECT
T ss_pred ---ceeEehhhcc-----------------cCCCChHHHHHHHHHhCCCcccEEEEeCCHHHHHHHHHCCCEEEEEeC
Confidence 1112221100 000112222334444433335699999999999999999999999543
|
| >3zx4_A MPGP, mannosyl-3-phosphoglycerate phosphatase; hydrolase, haloalkanoid acid dehalogenase-like phosphatase, crystallographic snapshot; HET: 2M8; 1.74A {Thermus thermophilus} PDB: 3zty_A 3zu6_A* 3ztw_A* 3zw7_A* 3zwd_A* 3zwk_A 3zup_A* 3zx5_A* | Back alignment and structure |
|---|
Probab=97.32 E-value=0.00074 Score=73.91 Aligned_cols=44 Identities=20% Similarity=0.326 Sum_probs=38.8
Q ss_pred hhHHHHHHHHhHc-C-----CEEEEEcCCccCHHHHhhCCceEEeccCCC
Q 001010 789 EQKELILTTFKAV-G-----RMTLMCGDGTNDVGALKQAHVGVALLNAVP 832 (1191)
Q Consensus 789 ~qK~~iV~~Lq~~-g-----~~V~m~GDG~ND~~ALk~AdVGIAl~~~~~ 832 (1191)
..|...++.+.+. | ..++++||+.||.+|++.|++||+|+|+.+
T Consensus 175 ~~K~~~l~~l~~~~~i~~~~~~~~~~GD~~nD~~m~~~ag~~va~~na~~ 224 (259)
T 3zx4_A 175 ADKGRAVARLRALWPDPEEARFAVGLGDSLNDLPLFRAVDLAVYVGRGDP 224 (259)
T ss_dssp CCHHHHHHHHHHTCSSHHHHTSEEEEESSGGGHHHHHTSSEEEECSSSCC
T ss_pred CCHHHHHHHHHHHhCCCCCCceEEEEeCCHHHHHHHHhCCCeEEeCChhh
Confidence 5888888887663 4 679999999999999999999999999877
|
| >3nuq_A Protein SSM1, putative nucleotide phosphatase; suppresses the 6-AU sensitivity of transcription elongation II; 1.70A {Saccharomyces cerevisiae} PDB: 3onn_A 3opx_A* | Back alignment and structure |
|---|
Probab=97.28 E-value=0.00066 Score=74.95 Aligned_cols=110 Identities=9% Similarity=-0.053 Sum_probs=74.7
Q ss_pred CcCCchhHHHHHHHHhcCC--cEEEEcCCCHHHHHHHHHHcCCCCCCcEEEeecCCCceeeecCCCccccccCChHHHhc
Q 001010 673 CPIREDSAKILSELKNSSQ--DLAMITGDQALTACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEG 750 (1191)
Q Consensus 673 d~lK~da~~~I~~L~~agi--~vvMiTGDn~~TA~~VA~~~gI~~~~~~il~~~~~~~~~~w~~~d~~~~~~~~~~~~~~ 750 (1191)
-++.|++.++++.|++.|+ ++.++|+.....+..+.+.+|+...-..++
T Consensus 141 ~~~~p~~~~~L~~L~~~g~~~~l~i~Tn~~~~~~~~~l~~~gl~~~fd~v~----------------------------- 191 (282)
T 3nuq_A 141 LKPDIPLRNMLLRLRQSGKIDKLWLFTNAYKNHAIRCLRLLGIADLFDGLT----------------------------- 191 (282)
T ss_dssp CCCCHHHHHHHHHHHHSSSCSEEEEECSSCHHHHHHHHHHHTCTTSCSEEE-----------------------------
T ss_pred cCcChhHHHHHHHHHhCCCCceEEEEECCChHHHHHHHHhCCcccccceEE-----------------------------
Confidence 4678999999999999999 999999999999999999999853211111
Q ss_pred ccccceEEEechhhhhhcchHHHHhhcCcceEEeecChhhHHHHHHHHhHcC-CEEEEEcCCccCHHHHhhCCceEEecc
Q 001010 751 LTDAHDLCIGGDCFEMLQQTSAVLRVIPYVKVFARVAPEQKELILTTFKAVG-RMTLMCGDGTNDVGALKQAHVGVALLN 829 (1191)
Q Consensus 751 ~~~~~~l~itG~~l~~l~~~~~~~~~l~~~~VfAR~sP~qK~~iV~~Lq~~g-~~V~m~GDG~ND~~ALk~AdVGIAl~~ 829 (1191)
+++... .......-.|+-=..+.+.+.-.. ..++|+||+.||+.|.++|++|+++++
T Consensus 192 ---------~~~~~~-------------~~~~~~Kp~~~~~~~~~~~lgi~~~~~~i~vGD~~~Di~~a~~aG~~~~~~~ 249 (282)
T 3nuq_A 192 ---------YCDYSR-------------TDTLVCKPHVKAFEKAMKESGLARYENAYFIDDSGKNIETGIKLGMKTCIHL 249 (282)
T ss_dssp ---------CCCCSS-------------CSSCCCTTSHHHHHHHHHHHTCCCGGGEEEEESCHHHHHHHHHHTCSEEEEE
T ss_pred ---------EeccCC-------------CcccCCCcCHHHHHHHHHHcCCCCcccEEEEcCCHHHHHHHHHCCCeEEEEE
Confidence 111000 000001111222223333333333 679999999999999999999999998
Q ss_pred CCCc
Q 001010 830 AVPP 833 (1191)
Q Consensus 830 ~~~e 833 (1191)
+...
T Consensus 250 ~~~~ 253 (282)
T 3nuq_A 250 VENE 253 (282)
T ss_dssp CSCC
T ss_pred cCCc
Confidence 7654
|
| >2rbk_A Putative uncharacterized protein; HAD-like phosphatase, unknown function; 1.00A {Bacteroides thetaiotaomicron} SCOP: c.108.1.10 PDB: 1ymq_A 2rb5_A 2rav_A 2rar_A | Back alignment and structure |
|---|
Probab=97.27 E-value=0.00013 Score=79.97 Aligned_cols=53 Identities=26% Similarity=0.374 Sum_probs=40.3
Q ss_pred hHHHHHHHHhH-cC---CEEEEEcCCccCHHHHhhCCceEEeccCCCccccccCCccc
Q 001010 790 QKELILTTFKA-VG---RMTLMCGDGTNDVGALKQAHVGVALLNAVPPTQSGNSSSEA 843 (1191)
Q Consensus 790 qK~~iV~~Lq~-~g---~~V~m~GDG~ND~~ALk~AdVGIAl~~~~~e~~~~asdi~~ 843 (1191)
.|...++.+.+ .| ..++++||+.||.+|++.|++|++|+++.++.+ ..++.+.
T Consensus 187 ~K~~~~~~~~~~~~~~~~~~~~iGD~~nD~~~~~~ag~~v~~~n~~~~~~-~~a~~v~ 243 (261)
T 2rbk_A 187 TKQKGIDEIIRHFGIKLEETMSFGDGGNDISMLRHAAIGVAMGQAKEDVK-AAADYVT 243 (261)
T ss_dssp SHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHH-HHSSEEC
T ss_pred ChHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCceEEecCccHHHH-hhCCEEe
Confidence 67777766654 33 469999999999999999999999998776654 4444443
|
| >3sd7_A Putative phosphatase; structural genomics, haloacid dehalogenase-like hydrolase, H center for structural genomics of infectious diseases; HET: PGE; 1.70A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=97.27 E-value=0.00018 Score=77.26 Aligned_cols=42 Identities=21% Similarity=0.153 Sum_probs=38.7
Q ss_pred CcCCchhHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCC
Q 001010 673 CPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIV 714 (1191)
Q Consensus 673 d~lK~da~~~I~~L~~agi~vvMiTGDn~~TA~~VA~~~gI~ 714 (1191)
.++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+.
T Consensus 109 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~ 150 (240)
T 3sd7_A 109 NKIYENMKEILEMLYKNGKILLVATSKPTVFAETILRYFDID 150 (240)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCG
T ss_pred cccCccHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHcCcH
Confidence 467899999999999999999999999999999999999985
|
| >2fea_A 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; 2633731, structural genomics, joint center for structural GE JCSG; HET: MSE; 2.00A {Bacillus subtilis} SCOP: c.108.1.20 | Back alignment and structure |
|---|
Probab=97.26 E-value=0.00043 Score=74.61 Aligned_cols=113 Identities=17% Similarity=0.168 Sum_probs=75.8
Q ss_pred cCcCCchhHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCcEEEeecC-CCceeeecCCCccccccCChHHHhc
Q 001010 672 NCPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLILCPVK-NGKVYEWVSPDETEKIQYSEKEVEG 750 (1191)
Q Consensus 672 ~d~lK~da~~~I~~L~~agi~vvMiTGDn~~TA~~VA~~~gI~~~~~~il~~~~-~~~~~~w~~~d~~~~~~~~~~~~~~ 750 (1191)
.-++.|++.++++.|+++|+++.++|+.+...+..+.+ |+...+.++-.+.. .+..
T Consensus 75 ~~~~~pg~~~~l~~L~~~g~~~~ivS~~~~~~~~~~l~--~l~~~~~v~~~~~~~~~~~--------------------- 131 (236)
T 2fea_A 75 DAKIREGFREFVAFINEHEIPFYVISGGMDFFVYPLLE--GIVEKDRIYCNHASFDNDY--------------------- 131 (236)
T ss_dssp HCCBCTTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHT--TTSCGGGEEEEEEECSSSB---------------------
T ss_pred CCCCCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHh--cCCCCCeEEeeeeEEcCCc---------------------
Confidence 34789999999999999999999999999988888887 76432222211100 0000
Q ss_pred ccccceEEEechhhhhhcchHHHHhhcCcceEEeecChhhHHHHHHHHhHcCCEEEEEcCCccCHHHHhhCCceEEe
Q 001010 751 LTDAHDLCIGGDCFEMLQQTSAVLRVIPYVKVFARVAPEQKELILTTFKAVGRMTLMCGDGTNDVGALKQAHVGVAL 827 (1191)
Q Consensus 751 ~~~~~~l~itG~~l~~l~~~~~~~~~l~~~~VfAR~sP~qK~~iV~~Lq~~g~~V~m~GDG~ND~~ALk~AdVGIAl 827 (1191)
++|.. . -++...+-+-...+|..+++.+.-....++|+||+.||+.|.+.|++.++.
T Consensus 132 --------~~~~~-----~-------kp~p~~~~~~~~~~K~~~~~~~~~~~~~~~~vGDs~~Di~~a~~aG~~~~~ 188 (236)
T 2fea_A 132 --------IHIDW-----P-------HSCKGTCSNQCGCCKPSVIHELSEPNQYIIMIGDSVTDVEAAKLSDLCFAR 188 (236)
T ss_dssp --------CEEEC-----T-------TCCCTTCCSCCSSCHHHHHHHHCCTTCEEEEEECCGGGHHHHHTCSEEEEC
T ss_pred --------eEEec-----C-------CCCccccccccCCcHHHHHHHHhccCCeEEEEeCChHHHHHHHhCCeeeec
Confidence 00000 0 000010111135678899998877778999999999999999999998863
|
| >3umb_A Dehalogenase-like hydrolase; 2.20A {Ralstonia solanacearum} | Back alignment and structure |
|---|
Probab=97.26 E-value=0.00047 Score=73.25 Aligned_cols=101 Identities=10% Similarity=0.081 Sum_probs=70.7
Q ss_pred CcCCchhHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCcEEEeecCCCceeeecCCCccccccCChHHHhccc
Q 001010 673 CPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLT 752 (1191)
Q Consensus 673 d~lK~da~~~I~~L~~agi~vvMiTGDn~~TA~~VA~~~gI~~~~~~il~~~~~~~~~~w~~~d~~~~~~~~~~~~~~~~ 752 (1191)
.++.|++.++++.|++.|+++.++|+.....+..+.+.+|+...-.
T Consensus 98 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f~---------------------------------- 143 (233)
T 3umb_A 98 LSAFPENVPVLRQLREMGLPLGILSNGNPQMLEIAVKSAGMSGLFD---------------------------------- 143 (233)
T ss_dssp CEECTTHHHHHHHHHTTTCCEEEEESSCHHHHHHHHHTTTCTTTCS----------------------------------
T ss_pred CCCCCCHHHHHHHHHhCCCcEEEEeCCCHHHHHHHHHHCCcHhhcC----------------------------------
Confidence 4678999999999999999999999999999999989888852111
Q ss_pred ccceEEEechhhhhhcchHHHHhhcCcceEEeecChhhHHHHHHHHhHcCCEEEEEcCCccCHHHHhhCCceEEec
Q 001010 753 DAHDLCIGGDCFEMLQQTSAVLRVIPYVKVFARVAPEQKELILTTFKAVGRMTLMCGDGTNDVGALKQAHVGVALL 828 (1191)
Q Consensus 753 ~~~~l~itG~~l~~l~~~~~~~~~l~~~~VfAR~sP~qK~~iV~~Lq~~g~~V~m~GDG~ND~~ALk~AdVGIAl~ 828 (1191)
.+++++.... ..-.|+--..+.+.+.-....++|+||+.||+.|.+.|++++++.
T Consensus 144 ----~~~~~~~~~~-----------------~kp~~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~~G~~~~~v 198 (233)
T 3umb_A 144 ----HVLSVDAVRL-----------------YKTAPAAYALAPRAFGVPAAQILFVSSNGWDACGATWHGFTTFWI 198 (233)
T ss_dssp ----EEEEGGGTTC-----------------CTTSHHHHTHHHHHHTSCGGGEEEEESCHHHHHHHHHHTCEEEEE
T ss_pred ----EEEEecccCC-----------------CCcCHHHHHHHHHHhCCCcccEEEEeCCHHHHHHHHHcCCEEEEE
Confidence 1111111000 001122223344444333356999999999999999999999994
|
| >1swv_A Phosphonoacetaldehyde hydrolase; HAD enzyme superfamily, phosphonotase, metal binding; 2.30A {Bacillus cereus} SCOP: c.108.1.3 PDB: 1sww_A 2iof_A* 2ioh_A 1rql_A 1rqn_A 2iof_K* 1rdf_A 1fez_A | Back alignment and structure |
|---|
Probab=97.20 E-value=0.00018 Score=78.56 Aligned_cols=104 Identities=16% Similarity=0.120 Sum_probs=69.2
Q ss_pred CcCCchhHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCcEEEeecCCCceeeecCCCccccccCChHHHhccc
Q 001010 673 CPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLT 752 (1191)
Q Consensus 673 d~lK~da~~~I~~L~~agi~vvMiTGDn~~TA~~VA~~~gI~~~~~~il~~~~~~~~~~w~~~d~~~~~~~~~~~~~~~~ 752 (1191)
.++.+++.+.++.|++.|+++.++|++....+..+.+.+|+...-
T Consensus 102 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~~~~~~----------------------------------- 146 (267)
T 1swv_A 102 ASPINGVKEVIASLRERGIKIGSTTGYTREMMDIVAKEAALQGYK----------------------------------- 146 (267)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEBCSSCHHHHHHHHHHHHHTTCC-----------------------------------
T ss_pred cccCccHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHcCCcccC-----------------------------------
Confidence 356799999999999999999999999988888888887763110
Q ss_pred ccceEEEechhhhhhcchHHHHhhcCcceEEeecChhhHHHHHHHHhHcC-CEEEEEcCCccCHHHHhhCC---ceEEec
Q 001010 753 DAHDLCIGGDCFEMLQQTSAVLRVIPYVKVFARVAPEQKELILTTFKAVG-RMTLMCGDGTNDVGALKQAH---VGVALL 828 (1191)
Q Consensus 753 ~~~~l~itG~~l~~l~~~~~~~~~l~~~~VfAR~sP~qK~~iV~~Lq~~g-~~V~m~GDG~ND~~ALk~Ad---VGIAl~ 828 (1191)
.+.+++++... ...-.|+--..+++.+.-.. ..++|+||+.||+.|++.|+ +||+++
T Consensus 147 --~~~~~~~~~~~-----------------~~kp~~~~~~~~~~~lgi~~~~~~i~iGD~~nDi~~a~~aG~~~i~v~~~ 207 (267)
T 1swv_A 147 --PDFLVTPDDVP-----------------AGRPYPWMCYKNAMELGVYPMNHMIKVGDTVSDMKEGRNAGMWTVGVILG 207 (267)
T ss_dssp --CSCCBCGGGSS-----------------CCTTSSHHHHHHHHHHTCCSGGGEEEEESSHHHHHHHHHTTSEEEEECTT
T ss_pred --hHheecCCccC-----------------CCCCCHHHHHHHHHHhCCCCCcCEEEEeCCHHHHHHHHHCCCEEEEEcCC
Confidence 00011111000 00112333344555554344 57999999999999999999 566666
Q ss_pred cC
Q 001010 829 NA 830 (1191)
Q Consensus 829 ~~ 830 (1191)
++
T Consensus 208 ~~ 209 (267)
T 1swv_A 208 SS 209 (267)
T ss_dssp CT
T ss_pred CC
Confidence 54
|
| >2om6_A Probable phosphoserine phosphatase; rossmann fold, B-hairpin, four-helix bundle, structural GENO NPPSFA; 2.20A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=97.20 E-value=0.00079 Score=71.26 Aligned_cols=98 Identities=15% Similarity=0.145 Sum_probs=67.6
Q ss_pred CCchhHHHHHHHHhcCCcEEEEcCCC---HHHHHHHHHHcCCCCCCcEEEeecCCCceeeecCCCccccccCChHHHhcc
Q 001010 675 IREDSAKILSELKNSSQDLAMITGDQ---ALTACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGL 751 (1191)
Q Consensus 675 lK~da~~~I~~L~~agi~vvMiTGDn---~~TA~~VA~~~gI~~~~~~il~~~~~~~~~~w~~~d~~~~~~~~~~~~~~~ 751 (1191)
+.+++.+.++.|++.|+++.++|+.. ...+..+.+..|+...
T Consensus 100 ~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~~~~l~~~~l~~~----------------------------------- 144 (235)
T 2om6_A 100 VLEGTKEALQFVKERGLKTAVIGNVMFWPGSYTRLLLERFGLMEF----------------------------------- 144 (235)
T ss_dssp BCTTHHHHHHHHHHTTCEEEEEECCCSSCHHHHHHHHHHTTCGGG-----------------------------------
T ss_pred cCccHHHHHHHHHHCCCEEEEEcCCcccchhHHHHHHHhCCcHHH-----------------------------------
Confidence 47999999999999999999999999 8888888888887421
Q ss_pred cccceEEEechhhhhhcchHHHHhhcCcceEEeecChhhHHHHHHHHhHcC---CEEEEEcCCc-cCHHHHhhCCceEEe
Q 001010 752 TDAHDLCIGGDCFEMLQQTSAVLRVIPYVKVFARVAPEQKELILTTFKAVG---RMTLMCGDGT-NDVGALKQAHVGVAL 827 (1191)
Q Consensus 752 ~~~~~l~itG~~l~~l~~~~~~~~~l~~~~VfAR~sP~qK~~iV~~Lq~~g---~~V~m~GDG~-ND~~ALk~AdVGIAl 827 (1191)
++..++++... +..|+ ..-+-..+++.| ..++++||+. ||+.|++.|++++++
T Consensus 145 ---f~~~~~~~~~~-------------------~~kp~-~~~~~~~~~~lgi~~~~~~~iGD~~~nDi~~a~~aG~~~~~ 201 (235)
T 2om6_A 145 ---IDKTFFADEVL-------------------SYKPR-KEMFEKVLNSFEVKPEESLHIGDTYAEDYQGARKVGMWAVW 201 (235)
T ss_dssp ---CSEEEEHHHHT-------------------CCTTC-HHHHHHHHHHTTCCGGGEEEEESCTTTTHHHHHHTTSEEEE
T ss_pred ---hhhheeccccC-------------------CCCCC-HHHHHHHHHHcCCCccceEEECCChHHHHHHHHHCCCEEEE
Confidence 11122221110 11121 111222333333 4699999999 999999999999999
Q ss_pred ccC
Q 001010 828 LNA 830 (1191)
Q Consensus 828 ~~~ 830 (1191)
.+.
T Consensus 202 ~~~ 204 (235)
T 2om6_A 202 INQ 204 (235)
T ss_dssp ECT
T ss_pred ECC
Confidence 543
|
| >1zrn_A L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseudomonas SP} SCOP: c.108.1.1 PDB: 1zrm_A 1jud_A 1qh9_A | Back alignment and structure |
|---|
Probab=97.18 E-value=0.00074 Score=71.80 Aligned_cols=103 Identities=15% Similarity=0.079 Sum_probs=71.8
Q ss_pred CcCCchhHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCcEEEeecCCCceeeecCCCccccccCChHHHhccc
Q 001010 673 CPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLT 752 (1191)
Q Consensus 673 d~lK~da~~~I~~L~~agi~vvMiTGDn~~TA~~VA~~~gI~~~~~~il~~~~~~~~~~w~~~d~~~~~~~~~~~~~~~~ 752 (1191)
.++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+...-
T Consensus 94 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f----------------------------------- 138 (232)
T 1zrn_A 94 LAPFSEVPDSLRELKRRGLKLAILSNGSPQSIDAVVSHAGLRDGF----------------------------------- 138 (232)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGC-----------------------------------
T ss_pred CCCCccHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHhcChHhhh-----------------------------------
Confidence 357899999999999999999999999998888999999884211
Q ss_pred ccceEEEechhhhhhcchHHHHhhcCcceEEeecChhhHHHHHHHHhHcCCEEEEEcCCccCHHHHhhCCceEEeccC
Q 001010 753 DAHDLCIGGDCFEMLQQTSAVLRVIPYVKVFARVAPEQKELILTTFKAVGRMTLMCGDGTNDVGALKQAHVGVALLNA 830 (1191)
Q Consensus 753 ~~~~l~itG~~l~~l~~~~~~~~~l~~~~VfAR~sP~qK~~iV~~Lq~~g~~V~m~GDG~ND~~ALk~AdVGIAl~~~ 830 (1191)
+.+++++... ...-.|+--..+.+.+.-....++|+||+.||+.|.+.|++++++.+.
T Consensus 139 ---~~~~~~~~~~-----------------~~Kp~~~~~~~~~~~~~~~~~~~~~iGD~~~Di~~a~~aG~~~~~~~~ 196 (232)
T 1zrn_A 139 ---DHLLSVDPVQ-----------------VYKPDNRVYELAEQALGLDRSAILFVASNAWDATGARYFGFPTCWINR 196 (232)
T ss_dssp ---SEEEESGGGT-----------------CCTTSHHHHHHHHHHHTSCGGGEEEEESCHHHHHHHHHHTCCEEEECT
T ss_pred ---heEEEecccC-----------------CCCCCHHHHHHHHHHcCCCcccEEEEeCCHHHHHHHHHcCCEEEEEcC
Confidence 1111211100 011123233344444433335689999999999999999999988644
|
| >2no4_A (S)-2-haloacid dehalogenase IVA; HAD superfamily, rossman fold, hydrol; 1.93A {Burkholderia cepacia} PDB: 2no5_A* | Back alignment and structure |
|---|
Probab=97.18 E-value=0.00079 Score=72.17 Aligned_cols=42 Identities=14% Similarity=0.122 Sum_probs=38.4
Q ss_pred CcCCchhHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCC
Q 001010 673 CPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIV 714 (1191)
Q Consensus 673 d~lK~da~~~I~~L~~agi~vvMiTGDn~~TA~~VA~~~gI~ 714 (1191)
.++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+.
T Consensus 104 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~ 145 (240)
T 2no4_A 104 LSAYPDAAETLEKLKSAGYIVAILSNGNDEMLQAALKASKLD 145 (240)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCG
T ss_pred CCCCCCHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHhcCcH
Confidence 367899999999999999999999999999999999999984
|
| >2hcf_A Hydrolase, haloacid dehalogenase-like family; NP_662590.1, ST genomics, PSI-2, protein structure initiative; 1.80A {Chlorobaculum tepidum} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=97.17 E-value=0.00031 Score=74.54 Aligned_cols=41 Identities=17% Similarity=0.163 Sum_probs=37.2
Q ss_pred cCCchhHHHHHHHHhc-CCcEEEEcCCCHHHHHHHHHHcCCC
Q 001010 674 PIREDSAKILSELKNS-SQDLAMITGDQALTACYVASQVHIV 714 (1191)
Q Consensus 674 ~lK~da~~~I~~L~~a-gi~vvMiTGDn~~TA~~VA~~~gI~ 714 (1191)
++.|++.+.++.|++. |+++.++|+.+...+..+.+.+|+.
T Consensus 93 ~~~~~~~~~l~~l~~~~g~~~~i~t~~~~~~~~~~l~~~~l~ 134 (234)
T 2hcf_A 93 TLLEGVRELLDALSSRSDVLLGLLTGNFEASGRHKLKLPGID 134 (234)
T ss_dssp EECTTHHHHHHHHHTCTTEEEEEECSSCHHHHHHHHHTTTCS
T ss_pred CcCCCHHHHHHHHHhCCCceEEEEcCCcHHHHHHHHHHCCch
Confidence 4679999999999999 9999999999998888888888874
|
| >2kmv_A Copper-transporting ATPase 1; menkes, nucleotide binding protein, alternative splicing, ATP-binding, cell membrane, cytoplasm, disease mutation; NMR {Homo sapiens} PDB: 2kmx_A* | Back alignment and structure |
|---|
Probab=97.15 E-value=0.0057 Score=63.62 Aligned_cols=54 Identities=9% Similarity=0.113 Sum_probs=45.2
Q ss_pred EEEEeCcHHHHHHhccCChHHHHHHHHHHHHhcCeeeeEEEEeCCCCChhhhhhccccccccCeEEeeeecccCc
Q 001010 600 FAFVKGAPETIQDRLTDLPSSYIETYKKYTHQGSRVLALAFKSLPDMTVSDARSLHRDEVENGLTFAGFAVFNCP 674 (1191)
Q Consensus 600 ~~~~KGapE~I~~~~~~~p~~~~~~~~~~a~~G~RVLalA~k~l~~~~~~~~~~~~r~~~E~dL~flG~l~~~d~ 674 (1191)
+.+..|+++.+.+....+|+..++...++..+|..++.+|. |..++|++.+.|+
T Consensus 132 ~~v~iGn~~~m~~~gi~i~~~~~~~~~~~~~~G~T~V~vai---------------------dg~l~g~iavaD~ 185 (185)
T 2kmv_A 132 YKVLIGNREWMIRNGLVINNDVNDFMTEHERKGRTAVLVAV---------------------DDELCGLIAIADT 185 (185)
T ss_dssp EEEEEECHHHHHHHTCCCCHHHHHHHHHHHHTTCEEEEEEE---------------------TTEEEEEEEEECC
T ss_pred eEEEECCHHHHHHcCCCCCHHHHHHHHHHHhCCCeEEEEEE---------------------CCEEEEEEEEEcC
Confidence 46778999999887777888777878888999999998884 5568999999885
|
| >1xvi_A MPGP, YEDP, putative mannosyl-3-phosphoglycerate phosphatase; hypothetical protein, conserved protein, phophatase-like domain; HET: 1PE PG4 PGE; 2.26A {Escherichia coli K12} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=97.14 E-value=0.0019 Score=71.46 Aligned_cols=40 Identities=10% Similarity=0.201 Sum_probs=36.6
Q ss_pred CCchhHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCC
Q 001010 675 IREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIV 714 (1191)
Q Consensus 675 lK~da~~~I~~L~~agi~vvMiTGDn~~TA~~VA~~~gI~ 714 (1191)
+-+.++++|++|++.|++++++||.....+..+.+++|+.
T Consensus 27 ~~~~~~~~l~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~ 66 (275)
T 1xvi_A 27 DWQPAAPWLTRLREANVPVILCSSKTSAEMLYLQKTLGLQ 66 (275)
T ss_dssp SCCTTHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHTTCT
T ss_pred CCHHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCC
Confidence 4467899999999999999999999999999999999873
|
| >2wm8_A MDP-1, magnesium-dependent phosphatase 1; haloacid dehalogenase, protein phosphatase, hydrolase, magne metal-binding; 1.75A {Homo sapiens} PDB: 1u7o_A 1u7p_A | Back alignment and structure |
|---|
Probab=97.12 E-value=0.00061 Score=70.74 Aligned_cols=42 Identities=10% Similarity=0.057 Sum_probs=38.3
Q ss_pred CcCCchhHHHHHHHHhcCCcEEEEcCCC-HHHHHHHHHHcCCC
Q 001010 673 CPIREDSAKILSELKNSSQDLAMITGDQ-ALTACYVASQVHIV 714 (1191)
Q Consensus 673 d~lK~da~~~I~~L~~agi~vvMiTGDn-~~TA~~VA~~~gI~ 714 (1191)
.++.|++.++|+.|++.|+++.++||.. ...+..+.+.+|+.
T Consensus 67 ~~~~~g~~e~L~~L~~~G~~v~ivT~~~~~~~~~~~l~~~gl~ 109 (187)
T 2wm8_A 67 VRLYPEVPEVLKRLQSLGVPGAAASRTSEIEGANQLLELFDLF 109 (187)
T ss_dssp ECCCTTHHHHHHHHHHHTCCEEEEECCSCHHHHHHHHHHTTCT
T ss_pred cCcchhHHHHHHHHHHCCceEEEEeCCCChHHHHHHHHHcCcH
Confidence 3678999999999999999999999998 78899999999984
|
| >3kzx_A HAD-superfamily hydrolase, subfamily IA, variant; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ehrlich chaffeensis; 1.90A {Ehrlichia chaffeensis} | Back alignment and structure |
|---|
Probab=97.12 E-value=0.0009 Score=71.08 Aligned_cols=102 Identities=15% Similarity=0.170 Sum_probs=70.3
Q ss_pred CcCCchhHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCcEEEeecCCCceeeecCCCccccccCChHHHhccc
Q 001010 673 CPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLT 752 (1191)
Q Consensus 673 d~lK~da~~~I~~L~~agi~vvMiTGDn~~TA~~VA~~~gI~~~~~~il~~~~~~~~~~w~~~d~~~~~~~~~~~~~~~~ 752 (1191)
.++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+...-
T Consensus 102 ~~~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~f----------------------------------- 146 (231)
T 3kzx_A 102 FMLNDGAIELLDTLKENNITMAIVSNKNGERLRSEIHHKNLTHYF----------------------------------- 146 (231)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCGGGC-----------------------------------
T ss_pred ceECcCHHHHHHHHHHCCCeEEEEECCCHHHHHHHHHHCCchhhe-----------------------------------
Confidence 356899999999999999999999999999999999999985211
Q ss_pred ccceEEEechhhhhhcchHHHHhhcCcceEEeecChhhHHHHHHHHhHcCC-EEEEEcCCccCHHHHhhCCc-eEEecc
Q 001010 753 DAHDLCIGGDCFEMLQQTSAVLRVIPYVKVFARVAPEQKELILTTFKAVGR-MTLMCGDGTNDVGALKQAHV-GVALLN 829 (1191)
Q Consensus 753 ~~~~l~itG~~l~~l~~~~~~~~~l~~~~VfAR~sP~qK~~iV~~Lq~~g~-~V~m~GDG~ND~~ALk~AdV-GIAl~~ 829 (1191)
+.+++++... ...-.|+--..+.+.+.-... .++|+||+.||+.|.+.|++ +|.+++
T Consensus 147 ---~~i~~~~~~~-----------------~~Kp~~~~~~~~~~~lgi~~~~~~v~vGD~~~Di~~a~~aG~~~v~~~~ 205 (231)
T 3kzx_A 147 ---DSIIGSGDTG-----------------TIKPSPEPVLAALTNINIEPSKEVFFIGDSISDIQSAIEAGCLPIKYGS 205 (231)
T ss_dssp ---SEEEEETSSS-----------------CCTTSSHHHHHHHHHHTCCCSTTEEEEESSHHHHHHHHHTTCEEEEECC
T ss_pred ---eeEEcccccC-----------------CCCCChHHHHHHHHHcCCCcccCEEEEcCCHHHHHHHHHCCCeEEEECC
Confidence 1111111100 001112222344444443344 79999999999999999997 666654
|
| >2fi1_A Hydrolase, haloacid dehalogenase-like family; structural genomics, haloacid dehalogenase-like F PSI, protein structure initiative; 1.40A {Streptococcus pneumoniae} SCOP: c.108.1.3 | Back alignment and structure |
|---|
Probab=97.09 E-value=0.00066 Score=69.66 Aligned_cols=99 Identities=13% Similarity=0.181 Sum_probs=65.8
Q ss_pred cCCchhHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCcEEEeecCCCceeeecCCCccccccCChHHHhcccc
Q 001010 674 PIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLTD 753 (1191)
Q Consensus 674 ~lK~da~~~I~~L~~agi~vvMiTGDn~~TA~~VA~~~gI~~~~~~il~~~~~~~~~~w~~~d~~~~~~~~~~~~~~~~~ 753 (1191)
.+.|++.+.++.|++.|+++.++|++.. .+..+.+..|+...
T Consensus 82 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~-~~~~~l~~~~~~~~------------------------------------- 123 (190)
T 2fi1_A 82 ILFEGVSDLLEDISNQGGRHFLVSHRND-QVLEILEKTSIAAY------------------------------------- 123 (190)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECSSCT-HHHHHHHHTTCGGG-------------------------------------
T ss_pred ccCcCHHHHHHHHHHCCCcEEEEECCcH-HHHHHHHHcCCHhh-------------------------------------
Confidence 3679999999999999999999998864 46667777776311
Q ss_pred cceEEEechhhhhhcchHHHHhhcCcceEEeecC--hhhHHHHHHHHhHcCCEEEEEcCCccCHHHHhhCCceEEeccCC
Q 001010 754 AHDLCIGGDCFEMLQQTSAVLRVIPYVKVFARVA--PEQKELILTTFKAVGRMTLMCGDGTNDVGALKQAHVGVALLNAV 831 (1191)
Q Consensus 754 ~~~l~itG~~l~~l~~~~~~~~~l~~~~VfAR~s--P~qK~~iV~~Lq~~g~~V~m~GDG~ND~~ALk~AdVGIAl~~~~ 831 (1191)
++..++++.. .+.. |+--..+.+.+.-. .++++||+.||+.|++.|++++++.+.+
T Consensus 124 -f~~~~~~~~~-------------------~~~kp~~~~~~~~~~~~~~~--~~~~iGD~~~Di~~a~~aG~~~~~~~~~ 181 (190)
T 2fi1_A 124 -FTEVVTSSSG-------------------FKRKPNPESMLYLREKYQIS--SGLVIGDRPIDIEAGQAAGLDTHLFTSI 181 (190)
T ss_dssp -EEEEECGGGC-------------------CCCTTSCHHHHHHHHHTTCS--SEEEEESSHHHHHHHHHTTCEEEECSCH
T ss_pred -eeeeeecccc-------------------CCCCCCHHHHHHHHHHcCCC--eEEEEcCCHHHHHHHHHcCCeEEEECCC
Confidence 1112222110 1111 22222333333222 7999999999999999999999888654
Q ss_pred C
Q 001010 832 P 832 (1191)
Q Consensus 832 ~ 832 (1191)
.
T Consensus 182 ~ 182 (190)
T 2fi1_A 182 V 182 (190)
T ss_dssp H
T ss_pred C
Confidence 3
|
| >2qlt_A (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, saccharom cerevisiae, structural genomics, PSI-2, protein structure initiative; 1.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=97.06 E-value=0.00064 Score=75.01 Aligned_cols=41 Identities=15% Similarity=0.001 Sum_probs=36.6
Q ss_pred cCCchhHHHHHHHHhc-CCcEEEEcCCCHHHHHHHHHHcCCC
Q 001010 674 PIREDSAKILSELKNS-SQDLAMITGDQALTACYVASQVHIV 714 (1191)
Q Consensus 674 ~lK~da~~~I~~L~~a-gi~vvMiTGDn~~TA~~VA~~~gI~ 714 (1191)
.+.+++.+.++.|++. |+++.++|+.....+..+.+..|+.
T Consensus 114 ~~~~g~~~~L~~l~~~~g~~l~i~T~~~~~~~~~~l~~~~l~ 155 (275)
T 2qlt_A 114 IEVPGAVKLCNALNALPKEKWAVATSGTRDMAKKWFDILKIK 155 (275)
T ss_dssp EECTTHHHHHHHHHTSCGGGEEEECSSCHHHHHHHHHHHTCC
T ss_pred CcCcCHHHHHHHHHhccCCeEEEEeCCCHHHHHHHHHHcCCC
Confidence 4579999999999999 9999999999998888888888873
|
| >2i6x_A Hydrolase, haloacid dehalogenase-like family; HAD superfamily, struct genomics, PSI-2, protein structure initiative; HET: MSE; 2.40A {Porphyromonas gingivalis} | Back alignment and structure |
|---|
Probab=97.05 E-value=0.00055 Score=71.69 Aligned_cols=105 Identities=10% Similarity=0.023 Sum_probs=69.8
Q ss_pred cCCchhHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHH------cCCCCCCcEEEeecCCCceeeecCCCccccccCChHH
Q 001010 674 PIREDSAKILSELKNSSQDLAMITGDQALTACYVASQ------VHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKE 747 (1191)
Q Consensus 674 ~lK~da~~~I~~L~~agi~vvMiTGDn~~TA~~VA~~------~gI~~~~~~il~~~~~~~~~~w~~~d~~~~~~~~~~~ 747 (1191)
++.|++.+.++.|++ |+++.++|+.....+..+.+. .|+..
T Consensus 89 ~~~~~~~~~l~~l~~-g~~~~i~t~~~~~~~~~~~~~l~~~~~~~l~~-------------------------------- 135 (211)
T 2i6x_A 89 EISAEKFDYIDSLRP-DYRLFLLSNTNPYVLDLAMSPRFLPSGRTLDS-------------------------------- 135 (211)
T ss_dssp EECHHHHHHHHHHTT-TSEEEEEECCCHHHHHHHTSTTSSTTCCCGGG--------------------------------
T ss_pred ccChHHHHHHHHHHc-CCeEEEEeCCCHHHHHHHHhhhccccccCHHH--------------------------------
Confidence 567999999999999 999999999888777766665 45521
Q ss_pred HhcccccceEEEechhhhhhcchHHHHhhcCcceEEeecChhhHHHHHHHHhHcCCEEEEEcCCccCHHHHhhCCceEEe
Q 001010 748 VEGLTDAHDLCIGGDCFEMLQQTSAVLRVIPYVKVFARVAPEQKELILTTFKAVGRMTLMCGDGTNDVGALKQAHVGVAL 827 (1191)
Q Consensus 748 ~~~~~~~~~l~itG~~l~~l~~~~~~~~~l~~~~VfAR~sP~qK~~iV~~Lq~~g~~V~m~GDG~ND~~ALk~AdVGIAl 827 (1191)
.++..++++... ...-.|+--..+++.+.-....++|+||+.||+.|.+.|++++.+
T Consensus 136 ------~f~~~~~~~~~~-----------------~~Kp~~~~~~~~~~~~~~~~~~~~~igD~~~Di~~a~~aG~~~~~ 192 (211)
T 2i6x_A 136 ------FFDKVYASCQMG-----------------KYKPNEDIFLEMIADSGMKPEETLFIDDGPANVATAERLGFHTYC 192 (211)
T ss_dssp ------GSSEEEEHHHHT-----------------CCTTSHHHHHHHHHHHCCCGGGEEEECSCHHHHHHHHHTTCEEEC
T ss_pred ------HcCeEEeecccC-----------------CCCCCHHHHHHHHHHhCCChHHeEEeCCCHHHHHHHHHcCCEEEE
Confidence 111222222110 001112222334444433345699999999999999999999999
Q ss_pred ccCCCcc
Q 001010 828 LNAVPPT 834 (1191)
Q Consensus 828 ~~~~~e~ 834 (1191)
.+++++.
T Consensus 193 ~~~~~~~ 199 (211)
T 2i6x_A 193 PDNGENW 199 (211)
T ss_dssp CCTTCCC
T ss_pred ECCHHHH
Confidence 9776543
|
| >3gyg_A NTD biosynthesis operon putative hydrolase NTDB; PF05116, PF08282, MCSG, PSI-2, haloacid dehalogenase-like HY structural genomics; 2.45A {Bacillus subtilis subsp} | Back alignment and structure |
|---|
Probab=97.03 E-value=0.0017 Score=72.15 Aligned_cols=54 Identities=24% Similarity=0.220 Sum_probs=40.9
Q ss_pred hhHHHHHHHHhH-cC---CEEEEEcCCccCHHHHhhCCceEEeccCCCccccccCCccc
Q 001010 789 EQKELILTTFKA-VG---RMTLMCGDGTNDVGALKQAHVGVALLNAVPPTQSGNSSSEA 843 (1191)
Q Consensus 789 ~qK~~iV~~Lq~-~g---~~V~m~GDG~ND~~ALk~AdVGIAl~~~~~e~~~~asdi~~ 843 (1191)
..|...++.+.+ .| ..++|+||+.||.+|++.|++|++++++.++..+. ++.+.
T Consensus 210 ~~k~~~~~~~~~~~~~~~~~~~~~GDs~~D~~~~~~ag~~~~~~~~~~~~~~~-a~~v~ 267 (289)
T 3gyg_A 210 TGKNEIVTFMLEKYNLNTERAIAFGDSGNDVRMLQTVGNGYLLKNATQEAKNL-HNLIT 267 (289)
T ss_dssp CSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHTTSSEEEECTTCCHHHHHH-CCCBC
T ss_pred CCHHHHHHHHHHHcCCChhhEEEEcCCHHHHHHHHhCCcEEEECCccHHHHHh-CCEEc
Confidence 357777766654 34 46999999999999999999999999876665443 45444
|
| >3iru_A Phoshonoacetaldehyde hydrolase like protein; phosphonoacetaldehyde hydrolase like P structural genomics, PSI-2, protein structure initiative; 2.30A {Oleispira antarctica} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=97.02 E-value=0.00038 Score=76.01 Aligned_cols=102 Identities=9% Similarity=-0.044 Sum_probs=69.0
Q ss_pred CcCCchhHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCcEEEeecCCCceeeecCCCccccccCChHHHhccc
Q 001010 673 CPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLT 752 (1191)
Q Consensus 673 d~lK~da~~~I~~L~~agi~vvMiTGDn~~TA~~VA~~~gI~~~~~~il~~~~~~~~~~w~~~d~~~~~~~~~~~~~~~~ 752 (1191)
.++.+++.+.++.|++.|+++.++|+.....+..+.+.+|+....
T Consensus 110 ~~~~~~~~~~l~~l~~~g~~~~i~tn~~~~~~~~~l~~~~~~~~~----------------------------------- 154 (277)
T 3iru_A 110 SQLIPGWKEVFDKLIAQGIKVGGNTGYGPGMMAPALIAAKEQGYT----------------------------------- 154 (277)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHHHTTCC-----------------------------------
T ss_pred CccCcCHHHHHHHHHHcCCeEEEEeCCchHHHHHHHHhcCcccCC-----------------------------------
Confidence 367899999999999999999999999998888888888874210
Q ss_pred ccceEEEechhhhhhcchHHHHhhcCcceEEeecChhhHHHHHHHHhHcC-CEEEEEcCCccCHHHHhhCCc---eEEec
Q 001010 753 DAHDLCIGGDCFEMLQQTSAVLRVIPYVKVFARVAPEQKELILTTFKAVG-RMTLMCGDGTNDVGALKQAHV---GVALL 828 (1191)
Q Consensus 753 ~~~~l~itG~~l~~l~~~~~~~~~l~~~~VfAR~sP~qK~~iV~~Lq~~g-~~V~m~GDG~ND~~ALk~AdV---GIAl~ 828 (1191)
++.+++++... ...-.|+-=..+.+.+.-.. ..++|+||+.||+.|.+.|++ ||+.+
T Consensus 155 --~~~~~~~~~~~-----------------~~kp~~~~~~~~~~~lgi~~~~~~i~vGD~~~Di~~a~~aG~~~v~v~~g 215 (277)
T 3iru_A 155 --PASTVFATDVV-----------------RGRPFPDMALKVALELEVGHVNGCIKVDDTLPGIEEGLRAGMWTVGVSCS 215 (277)
T ss_dssp --CSEEECGGGSS-----------------SCTTSSHHHHHHHHHHTCSCGGGEEEEESSHHHHHHHHHTTCEEEEECSS
T ss_pred --CceEecHHhcC-----------------CCCCCHHHHHHHHHHcCCCCCccEEEEcCCHHHHHHHHHCCCeEEEEecC
Confidence 01112221100 00011222234444454444 679999999999999999994 55555
|
| >2hdo_A Phosphoglycolate phosphatase; NP_784602.1, structur genomics, PSI-2, protein structure initiative, joint center structural genomics; HET: MSE; 1.50A {Lactobacillus plantarum} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=97.01 E-value=0.00057 Score=71.50 Aligned_cols=99 Identities=14% Similarity=0.153 Sum_probs=69.1
Q ss_pred CcCCchhHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCcEEEeecCCCceeeecCCCccccccCChHHHhccc
Q 001010 673 CPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLT 752 (1191)
Q Consensus 673 d~lK~da~~~I~~L~~agi~vvMiTGDn~~TA~~VA~~~gI~~~~~~il~~~~~~~~~~w~~~d~~~~~~~~~~~~~~~~ 752 (1191)
.++.|++.+.++.|++. +++.++|+.....+..+.+.+|+...
T Consensus 82 ~~~~~~~~~~l~~l~~~-~~~~i~s~~~~~~~~~~l~~~~l~~~------------------------------------ 124 (209)
T 2hdo_A 82 IELYPGITSLFEQLPSE-LRLGIVTSQRRNELESGMRSYPFMMR------------------------------------ 124 (209)
T ss_dssp CEECTTHHHHHHHSCTT-SEEEEECSSCHHHHHHHHTTSGGGGG------------------------------------
T ss_pred CCcCCCHHHHHHHHHhc-CcEEEEeCCCHHHHHHHHHHcChHhh------------------------------------
Confidence 45789999999999999 99999999999888888888887411
Q ss_pred ccceEEEechhhhhhcchHHHHhhcCcceEEeecC--hhhHHHHHHHHhHcCCEEEEEcCCccCHHHHhhCCceEEecc
Q 001010 753 DAHDLCIGGDCFEMLQQTSAVLRVIPYVKVFARVA--PEQKELILTTFKAVGRMTLMCGDGTNDVGALKQAHVGVALLN 829 (1191)
Q Consensus 753 ~~~~l~itG~~l~~l~~~~~~~~~l~~~~VfAR~s--P~qK~~iV~~Lq~~g~~V~m~GDG~ND~~ALk~AdVGIAl~~ 829 (1191)
++.+++++.. .... |+--..+.+.+.-....++|+||+.||+.|.+.|++++++.+
T Consensus 125 --f~~~~~~~~~-------------------~~~KP~~~~~~~~~~~~~~~~~~~i~vGD~~~Di~~a~~aG~~~~~~~ 182 (209)
T 2hdo_A 125 --MAVTISADDT-------------------PKRKPDPLPLLTALEKVNVAPQNALFIGDSVSDEQTAQAANVDFGLAV 182 (209)
T ss_dssp --EEEEECGGGS-------------------SCCTTSSHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEEG
T ss_pred --ccEEEecCcC-------------------CCCCCCcHHHHHHHHHcCCCcccEEEECCChhhHHHHHHcCCeEEEEc
Confidence 1112222110 0112 222233344443333569999999999999999999999865
|
| >3qnm_A Haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 1.70A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=97.01 E-value=0.0018 Score=68.76 Aligned_cols=101 Identities=15% Similarity=0.145 Sum_probs=70.1
Q ss_pred CcCCchhHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCcEEEeecCCCceeeecCCCccccccCChHHHhccc
Q 001010 673 CPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLT 752 (1191)
Q Consensus 673 d~lK~da~~~I~~L~~agi~vvMiTGDn~~TA~~VA~~~gI~~~~~~il~~~~~~~~~~w~~~d~~~~~~~~~~~~~~~~ 752 (1191)
.++.|++.++++.|+ .|+++.++|+.....+..+.+.+|+...-
T Consensus 106 ~~~~~~~~~~l~~l~-~g~~~~i~sn~~~~~~~~~l~~~~l~~~f----------------------------------- 149 (240)
T 3qnm_A 106 SGLMPHAKEVLEYLA-PQYNLYILSNGFRELQSRKMRSAGVDRYF----------------------------------- 149 (240)
T ss_dssp CCBSTTHHHHHHHHT-TTSEEEEEECSCHHHHHHHHHHHTCGGGC-----------------------------------
T ss_pred CCcCccHHHHHHHHH-cCCeEEEEeCCchHHHHHHHHHcChHhhc-----------------------------------
Confidence 356799999999999 99999999999988888888888874211
Q ss_pred ccceEEEechhhhhhcchHHHHhhcCcceEEeecChhhHHHHHHHHhHcC---CEEEEEcCCc-cCHHHHhhCCceEEec
Q 001010 753 DAHDLCIGGDCFEMLQQTSAVLRVIPYVKVFARVAPEQKELILTTFKAVG---RMTLMCGDGT-NDVGALKQAHVGVALL 828 (1191)
Q Consensus 753 ~~~~l~itG~~l~~l~~~~~~~~~l~~~~VfAR~sP~qK~~iV~~Lq~~g---~~V~m~GDG~-ND~~ALk~AdVGIAl~ 828 (1191)
+.+++++... ...|+ ..-+-..+++.| ..++|+||+. ||+.|.+.|++++++.
T Consensus 150 ---~~~~~~~~~~-------------------~~kp~-~~~~~~~~~~lgi~~~~~~~iGD~~~~Di~~a~~aG~~~~~~ 206 (240)
T 3qnm_A 150 ---KKIILSEDLG-------------------VLKPR-PEIFHFALSATQSELRESLMIGDSWEADITGAHGVGMHQAFY 206 (240)
T ss_dssp ---SEEEEGGGTT-------------------CCTTS-HHHHHHHHHHTTCCGGGEEEEESCTTTTHHHHHHTTCEEEEE
T ss_pred ---eeEEEeccCC-------------------CCCCC-HHHHHHHHHHcCCCcccEEEECCCchHhHHHHHHcCCeEEEE
Confidence 1111211110 01121 112222333333 4799999995 9999999999999999
Q ss_pred cCCC
Q 001010 829 NAVP 832 (1191)
Q Consensus 829 ~~~~ 832 (1191)
+.+.
T Consensus 207 ~~~~ 210 (240)
T 3qnm_A 207 NVTE 210 (240)
T ss_dssp CCSC
T ss_pred cCCC
Confidence 8765
|
| >3u26_A PF00702 domain protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, unknown function; 1.59A {Pyrococcus horikoshii} SCOP: c.108.1.1 PDB: 1x42_A | Back alignment and structure |
|---|
Probab=96.99 E-value=0.0015 Score=69.23 Aligned_cols=114 Identities=17% Similarity=0.139 Sum_probs=73.6
Q ss_pred CcCCchhHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCcEEEeecCCCceeeecCCCccccccCChHHHhccc
Q 001010 673 CPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLT 752 (1191)
Q Consensus 673 d~lK~da~~~I~~L~~agi~vvMiTGDn~~TA~~VA~~~gI~~~~~~il~~~~~~~~~~w~~~d~~~~~~~~~~~~~~~~ 752 (1191)
.++.|++.+.++.|++. +++.++|+.....+..+.+..|+...
T Consensus 99 ~~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~~~~~------------------------------------ 141 (234)
T 3u26_A 99 GELYPEVVEVLKSLKGK-YHVGMITDSDTEQAMAFLDALGIKDL------------------------------------ 141 (234)
T ss_dssp CCBCTTHHHHHHHHTTT-SEEEEEESSCHHHHHHHHHHTTCGGG------------------------------------
T ss_pred CCcCcCHHHHHHHHHhC-CcEEEEECCCHHHHHHHHHHcCcHHH------------------------------------
Confidence 35679999999999999 99999999999988888888887421
Q ss_pred ccceEEEechhhhhhcchHHHHhhcCcceEEeecChhhHHHHHHHHhHcCCEEEEEcCCc-cCHHHHhhCC---ceEEec
Q 001010 753 DAHDLCIGGDCFEMLQQTSAVLRVIPYVKVFARVAPEQKELILTTFKAVGRMTLMCGDGT-NDVGALKQAH---VGVALL 828 (1191)
Q Consensus 753 ~~~~l~itG~~l~~l~~~~~~~~~l~~~~VfAR~sP~qK~~iV~~Lq~~g~~V~m~GDG~-ND~~ALk~Ad---VGIAl~ 828 (1191)
++..++++.... ..-.|+--..+.+.+.-....++|+||+. ||+.|.+.|+ ++|+++
T Consensus 142 --f~~~~~~~~~~~-----------------~kp~~~~~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~aG~~~~~v~~~ 202 (234)
T 3u26_A 142 --FDSITTSEEAGF-----------------FKPHPRIFELALKKAGVKGEEAVYVGDNPVKDCGGSKNLGMTSILLDRK 202 (234)
T ss_dssp --CSEEEEHHHHTB-----------------CTTSHHHHHHHHHHHTCCGGGEEEEESCTTTTHHHHHTTTCEEEEECSS
T ss_pred --cceeEeccccCC-----------------CCcCHHHHHHHHHHcCCCchhEEEEcCCcHHHHHHHHHcCCEEEEECCC
Confidence 111222221100 01112222334444433335799999997 9999999999 567666
Q ss_pred cCCCccccccCCccc
Q 001010 829 NAVPPTQSGNSSSEA 843 (1191)
Q Consensus 829 ~~~~e~~~~asdi~~ 843 (1191)
++..+... .++.+.
T Consensus 203 ~~~~~~~~-~a~~~~ 216 (234)
T 3u26_A 203 GEKREFWD-KCDFIV 216 (234)
T ss_dssp STTGGGGG-GCSEEE
T ss_pred CCcccccc-CCCEee
Confidence 54443333 344333
|
| >3dv9_A Beta-phosphoglucomutase; structural genomics, APC60149, PSI- protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.72A {Bacteroides vulgatus} | Back alignment and structure |
|---|
Probab=96.93 E-value=0.00096 Score=71.39 Aligned_cols=41 Identities=10% Similarity=0.135 Sum_probs=32.7
Q ss_pred CcCCchhHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCC
Q 001010 673 CPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIV 714 (1191)
Q Consensus 673 d~lK~da~~~I~~L~~agi~vvMiTGDn~~TA~~VA~~~gI~ 714 (1191)
.++.|++.+.++.|++.|+++.++|+.....+....+. |+.
T Consensus 107 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~-~l~ 147 (247)
T 3dv9_A 107 AERMPGALEVLTKIKSEGLTPMVVTGSGQTSLLDRLNH-NFP 147 (247)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEECSCC---CHHHHHH-HST
T ss_pred CCCCCCHHHHHHHHHHcCCcEEEEcCCchHHHHHHHHh-hHH
Confidence 46789999999999999999999999887777666666 764
|
| >3ddh_A Putative haloacid dehalogenase-like family hydrol; hydrolase, HAD superfamily, ST genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=96.91 E-value=0.0018 Score=68.26 Aligned_cols=92 Identities=13% Similarity=0.062 Sum_probs=67.2
Q ss_pred CcCCchhHHHHHHHHhcC-CcEEEEcCCCHHHHHHHHHHcCCCCCCcEEEeecCCCceeeecCCCccccccCChHHHhcc
Q 001010 673 CPIREDSAKILSELKNSS-QDLAMITGDQALTACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGL 751 (1191)
Q Consensus 673 d~lK~da~~~I~~L~~ag-i~vvMiTGDn~~TA~~VA~~~gI~~~~~~il~~~~~~~~~~w~~~d~~~~~~~~~~~~~~~ 751 (1191)
.++.|++.+.++.|++.| +++.++|+........+.+.+|+...-
T Consensus 104 ~~~~~~~~~~l~~l~~~g~~~~~i~t~~~~~~~~~~l~~~~~~~~f---------------------------------- 149 (234)
T 3ddh_A 104 IELLPGVKETLKTLKETGKYKLVVATKGDLLDQENKLERSGLSPYF---------------------------------- 149 (234)
T ss_dssp CCBCTTHHHHHHHHHHHCCCEEEEEEESCHHHHHHHHHHHTCGGGC----------------------------------
T ss_pred CCcCccHHHHHHHHHhCCCeEEEEEeCCchHHHHHHHHHhCcHhhh----------------------------------
Confidence 356899999999999999 999999999888888888888874210
Q ss_pred cccceEEEechhhhhhcchHHHHhhcCcceEEeecChhhHHHHHHH-HhHcC---CEEEEEcCCc-cCHHHHhhCCceEE
Q 001010 752 TDAHDLCIGGDCFEMLQQTSAVLRVIPYVKVFARVAPEQKELILTT-FKAVG---RMTLMCGDGT-NDVGALKQAHVGVA 826 (1191)
Q Consensus 752 ~~~~~l~itG~~l~~l~~~~~~~~~l~~~~VfAR~sP~qK~~iV~~-Lq~~g---~~V~m~GDG~-ND~~ALk~AdVGIA 826 (1191)
+ .++..-.| |...++. +++.| ..++|+||+. ||+.|.+.|+++++
T Consensus 150 ----~------------------------~~~~~~kp--k~~~~~~~~~~lgi~~~~~i~iGD~~~~Di~~a~~aG~~~v 199 (234)
T 3ddh_A 150 ----D------------------------HIEVMSDK--TEKEYLRLLSILQIAPSELLMVGNSFKSDIQPVLSLGGYGV 199 (234)
T ss_dssp ----S------------------------EEEEESCC--SHHHHHHHHHHHTCCGGGEEEEESCCCCCCHHHHHHTCEEE
T ss_pred ----h------------------------eeeecCCC--CHHHHHHHHHHhCCCcceEEEECCCcHHHhHHHHHCCCeEE
Confidence 0 01222223 3333332 22333 4699999996 99999999999998
Q ss_pred ec
Q 001010 827 LL 828 (1191)
Q Consensus 827 l~ 828 (1191)
+-
T Consensus 200 ~v 201 (234)
T 3ddh_A 200 HI 201 (234)
T ss_dssp EC
T ss_pred Ee
Confidence 85
|
| >3cnh_A Hydrolase family protein; NP_295428.1, predicted hydrolase of haloacid dehalogenase-LI superfamily; HET: MSE PG4; 1.66A {Deinococcus radiodurans R1} | Back alignment and structure |
|---|
Probab=96.84 E-value=0.0018 Score=67.10 Aligned_cols=101 Identities=11% Similarity=0.040 Sum_probs=69.7
Q ss_pred cCCchhHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCcEEEeecCCCceeeecCCCccccccCChHHHhcccc
Q 001010 674 PIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLTD 753 (1191)
Q Consensus 674 ~lK~da~~~I~~L~~agi~vvMiTGDn~~TA~~VA~~~gI~~~~~~il~~~~~~~~~~w~~~d~~~~~~~~~~~~~~~~~ 753 (1191)
++.|++.+.++.|++.| ++.++|+.+...+..+.+.+|+...-
T Consensus 86 ~~~~~~~~~l~~l~~~g-~~~i~s~~~~~~~~~~l~~~~~~~~f------------------------------------ 128 (200)
T 3cnh_A 86 QPRPEVLALARDLGQRY-RMYSLNNEGRDLNEYRIRTFGLGEFL------------------------------------ 128 (200)
T ss_dssp CBCHHHHHHHHHHTTTS-EEEEEECCCHHHHHHHHHHHTGGGTC------------------------------------
T ss_pred ccCccHHHHHHHHHHcC-CEEEEeCCcHHHHHHHHHhCCHHHhc------------------------------------
Confidence 47899999999999999 99999999999888888888874210
Q ss_pred cceEEEechhhhhhcchHHHHhhcCcceEEeecChhhHHHHHHHHhHcCCEEEEEcCCccCHHHHhhCCceEEeccC
Q 001010 754 AHDLCIGGDCFEMLQQTSAVLRVIPYVKVFARVAPEQKELILTTFKAVGRMTLMCGDGTNDVGALKQAHVGVALLNA 830 (1191)
Q Consensus 754 ~~~l~itG~~l~~l~~~~~~~~~l~~~~VfAR~sP~qK~~iV~~Lq~~g~~V~m~GDG~ND~~ALk~AdVGIAl~~~ 830 (1191)
+.+++++... ...-.|+--..+++.+.-....++|+||+.||+.|.+.|++...+.+.
T Consensus 129 --~~~~~~~~~~-----------------~~Kp~~~~~~~~~~~~~~~~~~~~~vgD~~~Di~~a~~aG~~~~~~~~ 186 (200)
T 3cnh_A 129 --LAFFTSSALG-----------------VMKPNPAMYRLGLTLAQVRPEEAVMVDDRLQNVQAARAVGMHAVQCVD 186 (200)
T ss_dssp --SCEEEHHHHS-----------------CCTTCHHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHHTTCEEEECSC
T ss_pred --ceEEeecccC-----------------CCCCCHHHHHHHHHHcCCCHHHeEEeCCCHHHHHHHHHCCCEEEEECC
Confidence 1111111100 011122222334444433335699999999999999999999888754
|
| >4eek_A Beta-phosphoglucomutase-related protein; hydrolase, magnesium binding site, enzyme function initiativ; 1.60A {Deinococcus radiodurans} PDB: 4eel_A* 4een_A | Back alignment and structure |
|---|
Probab=96.83 E-value=0.00065 Score=73.74 Aligned_cols=43 Identities=12% Similarity=0.082 Sum_probs=38.6
Q ss_pred cCcCCchhHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCC
Q 001010 672 NCPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIV 714 (1191)
Q Consensus 672 ~d~lK~da~~~I~~L~~agi~vvMiTGDn~~TA~~VA~~~gI~ 714 (1191)
..++.|++.++++.|++.|+++.++|+.....+..+.+..|+.
T Consensus 108 ~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~ 150 (259)
T 4eek_A 108 GVTAIEGAAETLRALRAAGVPFAIGSNSERGRLHLKLRVAGLT 150 (259)
T ss_dssp TCEECTTHHHHHHHHHHHTCCEEEECSSCHHHHHHHHHHTTCH
T ss_pred cCCcCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHhcChH
Confidence 3456799999999999999999999999999999999998874
|
| >3l5k_A Protein GS1, haloacid dehalogenase-like hydrolase domain- containing protein 1A; HDHD1A, haloacid dehalogenase-like hydrolase domain containing 1A; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.80 E-value=0.00071 Score=73.03 Aligned_cols=34 Identities=12% Similarity=0.218 Sum_probs=29.3
Q ss_pred CcCCchhHHHHHHHHhcCCcEEEEcCCCHHHHHH
Q 001010 673 CPIREDSAKILSELKNSSQDLAMITGDQALTACY 706 (1191)
Q Consensus 673 d~lK~da~~~I~~L~~agi~vvMiTGDn~~TA~~ 706 (1191)
.++.|++.++++.|++.|+++.++|+.....+..
T Consensus 111 ~~~~~~~~~~l~~l~~~g~~~~i~sn~~~~~~~~ 144 (250)
T 3l5k_A 111 AALMPGAEKLIIHLRKHGIPFALATSSRSASFDM 144 (250)
T ss_dssp CCBCTTHHHHHHHHHHTTCCEEEECSCCHHHHHH
T ss_pred CCCCCCHHHHHHHHHhCCCcEEEEeCCCHHHHHH
Confidence 4678999999999999999999999998665443
|
| >2hoq_A Putative HAD-hydrolase PH1655; haloacid dehalogenase, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.70A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=96.79 E-value=0.0031 Score=67.56 Aligned_cols=41 Identities=17% Similarity=0.185 Sum_probs=37.3
Q ss_pred cCCchhHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCC
Q 001010 674 PIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIV 714 (1191)
Q Consensus 674 ~lK~da~~~I~~L~~agi~vvMiTGDn~~TA~~VA~~~gI~ 714 (1191)
++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+.
T Consensus 94 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~ 134 (241)
T 2hoq_A 94 REVPGARKVLIRLKELGYELGIITDGNPVKQWEKILRLELD 134 (241)
T ss_dssp CBCTTHHHHHHHHHHHTCEEEEEECSCHHHHHHHHHHTTCG
T ss_pred CCCccHHHHHHHHHHCCCEEEEEECCCchhHHHHHHHcCcH
Confidence 56899999999999999999999999988888888888874
|
| >3umc_A Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=96.79 E-value=0.0018 Score=69.60 Aligned_cols=99 Identities=15% Similarity=0.135 Sum_probs=67.8
Q ss_pred CcCCchhHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCcEEEeecCCCceeeecCCCccccccCChHHHhccc
Q 001010 673 CPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLT 752 (1191)
Q Consensus 673 d~lK~da~~~I~~L~~agi~vvMiTGDn~~TA~~VA~~~gI~~~~~~il~~~~~~~~~~w~~~d~~~~~~~~~~~~~~~~ 752 (1191)
.++.|++.+.++.|++. +++.++|+.....+..+.+.+|+. -
T Consensus 119 ~~~~~~~~~~l~~l~~~-~~~~i~s~~~~~~~~~~l~~~g~~-f------------------------------------ 160 (254)
T 3umc_A 119 LRPWPDTLAGMHALKAD-YWLAALSNGNTALMLDVARHAGLP-W------------------------------------ 160 (254)
T ss_dssp CEECTTHHHHHHHHTTT-SEEEECCSSCHHHHHHHHHHHTCC-C------------------------------------
T ss_pred CCCCccHHHHHHHHHhc-CeEEEEeCCCHHHHHHHHHHcCCC-c------------------------------------
Confidence 35678999999999986 999999999998888888888873 0
Q ss_pred ccceEEEechhhhhhcchHHHHhhcCcceEEeecChhhHHHHHHHHhHcCCEEEEEcCCccCHHHHhhCCceEEecc
Q 001010 753 DAHDLCIGGDCFEMLQQTSAVLRVIPYVKVFARVAPEQKELILTTFKAVGRMTLMCGDGTNDVGALKQAHVGVALLN 829 (1191)
Q Consensus 753 ~~~~l~itG~~l~~l~~~~~~~~~l~~~~VfAR~sP~qK~~iV~~Lq~~g~~V~m~GDG~ND~~ALk~AdVGIAl~~ 829 (1191)
+.+++++... ...-.|+-=..+.+.+.-....++|+||+.||+.|.+.|+++++|.+
T Consensus 161 ---~~~~~~~~~~-----------------~~kp~~~~~~~~~~~lgi~~~~~~~iGD~~~Di~~a~~aG~~~~~~~ 217 (254)
T 3umc_A 161 ---DMLLCADLFG-----------------HYKPDPQVYLGACRLLDLPPQEVMLCAAHNYDLKAARALGLKTAFIA 217 (254)
T ss_dssp ---SEECCHHHHT-----------------CCTTSHHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHHTTCEEEEEC
T ss_pred ---ceEEeecccc-----------------cCCCCHHHHHHHHHHcCCChHHEEEEcCchHhHHHHHHCCCeEEEEe
Confidence 0111111100 00011222223333333233569999999999999999999999997
|
| >3qxg_A Inorganic pyrophosphatase; hydrolase, magnesium binding site, NEW YORK research center for structural genomics; HET: TLA; 1.24A {Bacteroides thetaiotaomicron} PDB: 3qu2_A* 3qx7_A 3quq_A* 3r9k_A 3qut_A 3qu9_A* 3qu7_A 3qu5_A 3qyp_A 3quc_A 3qub_A 3qu4_A | Back alignment and structure |
|---|
Probab=96.77 E-value=0.0011 Score=71.03 Aligned_cols=41 Identities=12% Similarity=0.133 Sum_probs=34.4
Q ss_pred CcCCchhHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCC
Q 001010 673 CPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIV 714 (1191)
Q Consensus 673 d~lK~da~~~I~~L~~agi~vvMiTGDn~~TA~~VA~~~gI~ 714 (1191)
.++.|++.+.++.|++.|+++.++|+.....+....+. |+.
T Consensus 108 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~-~l~ 148 (243)
T 3qxg_A 108 AERMPGAWELLQKVKSEGLTPMVVTGSGQLSLLERLEH-NFP 148 (243)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEECCCCCHHHHTTHHH-HST
T ss_pred CCCCCCHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHH-hHH
Confidence 35679999999999999999999999887777666666 764
|
| >2w43_A Hypothetical 2-haloalkanoic acid dehalogenase; hydrolase, metabolic process; HET: MES; 1.66A {Sulfolobus tokodaii} PDB: 2w11_A | Back alignment and structure |
|---|
Probab=96.70 E-value=0.0035 Score=65.13 Aligned_cols=98 Identities=11% Similarity=0.127 Sum_probs=68.9
Q ss_pred CcCCchhHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCcEEEeecCCCceeeecCCCccccccCChHHHhccc
Q 001010 673 CPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLT 752 (1191)
Q Consensus 673 d~lK~da~~~I~~L~~agi~vvMiTGDn~~TA~~VA~~~gI~~~~~~il~~~~~~~~~~w~~~d~~~~~~~~~~~~~~~~ 752 (1191)
.++.|++.+ ++.|++. +++.++|+.+...+..+.+.+|+...
T Consensus 73 ~~~~~~~~~-l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~l~~~------------------------------------ 114 (201)
T 2w43_A 73 LKAYEDTKY-LKEISEI-AEVYALSNGSINEVKQHLERNGLLRY------------------------------------ 114 (201)
T ss_dssp CEECGGGGG-HHHHHHH-SEEEEEESSCHHHHHHHHHHTTCGGG------------------------------------
T ss_pred cccCCChHH-HHHHHhC-CeEEEEeCcCHHHHHHHHHHCCcHHh------------------------------------
Confidence 466799999 9999999 99999999999888889999988421
Q ss_pred ccceEEEechhhhhhcchHHHHhhcCcceEEeecChhhHHHHHHHHhHcCCEEEEEcCCccCHHHHhhCCceEEecc
Q 001010 753 DAHDLCIGGDCFEMLQQTSAVLRVIPYVKVFARVAPEQKELILTTFKAVGRMTLMCGDGTNDVGALKQAHVGVALLN 829 (1191)
Q Consensus 753 ~~~~l~itG~~l~~l~~~~~~~~~l~~~~VfAR~sP~qK~~iV~~Lq~~g~~V~m~GDG~ND~~ALk~AdVGIAl~~ 829 (1191)
++.+++++... ...-.|+--..+++.+. ...++|+||+.||+.|.+.|+++..+-+
T Consensus 115 --f~~~~~~~~~~-----------------~~Kp~~~~~~~~~~~~~--~~~~~~vGD~~~Di~~a~~aG~~~~~~~ 170 (201)
T 2w43_A 115 --FKGIFSAESVK-----------------EYKPSPKVYKYFLDSIG--AKEAFLVSSNAFDVIGAKNAGMRSIFVN 170 (201)
T ss_dssp --CSEEEEGGGGT-----------------CCTTCHHHHHHHHHHHT--CSCCEEEESCHHHHHHHHHTTCEEEEEC
T ss_pred --CcEEEehhhcC-----------------CCCCCHHHHHHHHHhcC--CCcEEEEeCCHHHhHHHHHCCCEEEEEC
Confidence 11122222110 00112333334555555 4678999999999999999999987753
|
| >3smv_A S-(-)-azetidine-2-carboxylate hydrolase; haloacid dehalogenase superfamily, L-azetidine-2- carboxylate; HET: GOL; 1.38A {Pseudomonas} | Back alignment and structure |
|---|
Probab=96.68 E-value=0.0027 Score=67.23 Aligned_cols=101 Identities=14% Similarity=0.138 Sum_probs=68.5
Q ss_pred CcCCchhHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCcEEEeecCCCceeeecCCCccccccCChHHHhccc
Q 001010 673 CPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLT 752 (1191)
Q Consensus 673 d~lK~da~~~I~~L~~agi~vvMiTGDn~~TA~~VA~~~gI~~~~~~il~~~~~~~~~~w~~~d~~~~~~~~~~~~~~~~ 752 (1191)
.++.|++.++++.|++ |+++.++|+.....+..+.+.++-
T Consensus 98 ~~~~~~~~~~l~~l~~-~~~~~i~tn~~~~~~~~~l~~l~~--------------------------------------- 137 (240)
T 3smv_A 98 WPAFPDTVEALQYLKK-HYKLVILSNIDRNEFKLSNAKLGV--------------------------------------- 137 (240)
T ss_dssp CCBCTTHHHHHHHHHH-HSEEEEEESSCHHHHHHHHTTTCS---------------------------------------
T ss_pred CCCCCcHHHHHHHHHh-CCeEEEEeCCChhHHHHHHHhcCC---------------------------------------
Confidence 3678999999999999 899999999988777666555331
Q ss_pred ccceEEEechhhhhhcchHHHHhhcCcceEEeecChhhHHHHHHHHhHcC---CEEEEEcCCc-cCHHHHhhCCceEEec
Q 001010 753 DAHDLCIGGDCFEMLQQTSAVLRVIPYVKVFARVAPEQKELILTTFKAVG---RMTLMCGDGT-NDVGALKQAHVGVALL 828 (1191)
Q Consensus 753 ~~~~l~itG~~l~~l~~~~~~~~~l~~~~VfAR~sP~qK~~iV~~Lq~~g---~~V~m~GDG~-ND~~ALk~AdVGIAl~ 828 (1191)
.++.+++++... ...-.|+-...+++.+++.| ..++|+||+. ||+.|.++|++++++.
T Consensus 138 -~fd~i~~~~~~~-----------------~~KP~~~~~~~~l~~~~~lgi~~~~~~~vGD~~~~Di~~a~~aG~~~~~~ 199 (240)
T 3smv_A 138 -EFDHIITAQDVG-----------------SYKPNPNNFTYMIDALAKAGIEKKDILHTAESLYHDHIPANDAGLVSAWI 199 (240)
T ss_dssp -CCSEEEEHHHHT-----------------SCTTSHHHHHHHHHHHHHTTCCGGGEEEEESCTTTTHHHHHHHTCEEEEE
T ss_pred -ccCEEEEccccC-----------------CCCCCHHHHHHHHHHHHhcCCCchhEEEECCCchhhhHHHHHcCCeEEEE
Confidence 112222322211 11123443344544455544 4699999996 9999999999999997
Q ss_pred cCC
Q 001010 829 NAV 831 (1191)
Q Consensus 829 ~~~ 831 (1191)
+..
T Consensus 200 ~~~ 202 (240)
T 3smv_A 200 YRR 202 (240)
T ss_dssp CTT
T ss_pred cCC
Confidence 643
|
| >3ed5_A YFNB; APC60080, bacillus subtilis subsp. subtilis STR. 168, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.72A {Bacillus subtilis} PDB: 3i76_A | Back alignment and structure |
|---|
Probab=96.65 E-value=0.0054 Score=64.94 Aligned_cols=41 Identities=15% Similarity=0.197 Sum_probs=36.9
Q ss_pred CcCCchhHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCC
Q 001010 673 CPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIV 714 (1191)
Q Consensus 673 d~lK~da~~~I~~L~~agi~vvMiTGDn~~TA~~VA~~~gI~ 714 (1191)
.++.|++.+.++.|++. +++.++|+.....+..+.+.+|+.
T Consensus 102 ~~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~l~ 142 (238)
T 3ed5_A 102 HQLIDGAFDLISNLQQQ-FDLYIVTNGVSHTQYKRLRDSGLF 142 (238)
T ss_dssp CCBCTTHHHHHHHHHTT-SEEEEEECSCHHHHHHHHHHTTCG
T ss_pred CCCCccHHHHHHHHHhc-CeEEEEeCCCHHHHHHHHHHcChH
Confidence 36789999999999999 999999999998888888888874
|
| >1qq5_A Protein (L-2-haloacid dehalogenase); hydrolase; 1.52A {Xanthobacter autotrophicus} SCOP: c.108.1.1 PDB: 1qq6_A* 1qq7_A* 1aq6_A | Back alignment and structure |
|---|
Probab=96.54 E-value=0.0049 Score=66.68 Aligned_cols=101 Identities=18% Similarity=0.163 Sum_probs=70.0
Q ss_pred CcCCchhHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCcEEEeecCCCceeeecCCCccccccCChHHHhccc
Q 001010 673 CPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLT 752 (1191)
Q Consensus 673 d~lK~da~~~I~~L~~agi~vvMiTGDn~~TA~~VA~~~gI~~~~~~il~~~~~~~~~~w~~~d~~~~~~~~~~~~~~~~ 752 (1191)
.++.|++.++++.|+ |+++.++|+.+...+..+.+.+|+...-
T Consensus 92 ~~~~~~~~~~l~~l~--g~~~~i~t~~~~~~~~~~l~~~gl~~~f----------------------------------- 134 (253)
T 1qq5_A 92 LTPYPDAAQCLAELA--PLKRAILSNGAPDMLQALVANAGLTDSF----------------------------------- 134 (253)
T ss_dssp CCBCTTHHHHHHHHT--TSEEEEEESSCHHHHHHHHHHTTCGGGC-----------------------------------
T ss_pred CCCCccHHHHHHHHc--CCCEEEEeCcCHHHHHHHHHHCCchhhc-----------------------------------
Confidence 367899999999999 9999999999999999999999874211
Q ss_pred ccceEEEechhhhhhcchHHHHhhcCcceEEeecChhhHHHHHHHHhHcCCEEEEEcCCccCHHHHhhCCceEEeccC
Q 001010 753 DAHDLCIGGDCFEMLQQTSAVLRVIPYVKVFARVAPEQKELILTTFKAVGRMTLMCGDGTNDVGALKQAHVGVALLNA 830 (1191)
Q Consensus 753 ~~~~l~itG~~l~~l~~~~~~~~~l~~~~VfAR~sP~qK~~iV~~Lq~~g~~V~m~GDG~ND~~ALk~AdVGIAl~~~ 830 (1191)
+.+++++... ...-.|+--..+++.+.-....++|+||+.||+.|.+.|++++.+.+.
T Consensus 135 ---~~~~~~~~~~-----------------~~Kp~~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~aG~~~~~~~~ 192 (253)
T 1qq5_A 135 ---DAVISVDAKR-----------------VFKPHPDSYALVEEVLGVTPAEVLFVSSNGFDVGGAKNFGFSVARVAR 192 (253)
T ss_dssp ---SEEEEGGGGT-----------------CCTTSHHHHHHHHHHHCCCGGGEEEEESCHHHHHHHHHHTCEEEEECC
T ss_pred ---cEEEEccccC-----------------CCCCCHHHHHHHHHHcCCCHHHEEEEeCChhhHHHHHHCCCEEEEECC
Confidence 1111211110 011122223334444432335689999999999999999999998865
|
| >2b0c_A Putative phosphatase; alpha-D-glucose-1-phosphate, structural genomic protein structure initiative, midwest center for structural genomics, MCSG; HET: G1P; 2.00A {Escherichia coli} SCOP: c.108.1.2 | Back alignment and structure |
|---|
Probab=96.52 E-value=0.0005 Score=71.61 Aligned_cols=105 Identities=12% Similarity=0.193 Sum_probs=65.0
Q ss_pred cCCchhHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHH-cCCCCCCcEEEeecCCCceeeecCCCccccccCChHHHhccc
Q 001010 674 PIREDSAKILSELKNSSQDLAMITGDQALTACYVASQ-VHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLT 752 (1191)
Q Consensus 674 ~lK~da~~~I~~L~~agi~vvMiTGDn~~TA~~VA~~-~gI~~~~~~il~~~~~~~~~~w~~~d~~~~~~~~~~~~~~~~ 752 (1191)
++.|++.+.++.|++.|+++.++|+........+.+. .|+.
T Consensus 91 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~~~~~~~l~-------------------------------------- 132 (206)
T 2b0c_A 91 ALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEIR-------------------------------------- 132 (206)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEECCCCCTTSCCGGGCHHHH--------------------------------------
T ss_pred ccCccHHHHHHHHHHCCCeEEEEECCChHHHHHHHHhccChh--------------------------------------
Confidence 5689999999999999999999998664433222222 2221
Q ss_pred ccceEEEechhhhhhcchHHHHhhcCcceEEeecChhhHHHHHHHHhHcCCEEEEEcCCccCHHHHhhCCceEEeccCCC
Q 001010 753 DAHDLCIGGDCFEMLQQTSAVLRVIPYVKVFARVAPEQKELILTTFKAVGRMTLMCGDGTNDVGALKQAHVGVALLNAVP 832 (1191)
Q Consensus 753 ~~~~l~itG~~l~~l~~~~~~~~~l~~~~VfAR~sP~qK~~iV~~Lq~~g~~V~m~GDG~ND~~ALk~AdVGIAl~~~~~ 832 (1191)
..++.++++.... ...-.|+--..+++.+.-....++|+||+.||+.|.+.|+++..+.+.+.
T Consensus 133 ~~f~~~~~~~~~~-----------------~~Kp~~~~~~~~~~~~~~~~~~~~~vgD~~~Di~~a~~aG~~~~~~~~~~ 195 (206)
T 2b0c_A 133 DAADHIYLSQDLG-----------------MRKPEARIYQHVLQAEGFSPSDTVFFDDNADNIEGANQLGITSILVKDKT 195 (206)
T ss_dssp HHCSEEEEHHHHT-----------------CCTTCHHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHTTTCEEEECCSTT
T ss_pred hheeeEEEecccC-----------------CCCCCHHHHHHHHHHcCCCHHHeEEeCCCHHHHHHHHHcCCeEEEecCCc
Confidence 0112222222110 00112223334444444344579999999999999999999988886654
Q ss_pred c
Q 001010 833 P 833 (1191)
Q Consensus 833 e 833 (1191)
+
T Consensus 196 ~ 196 (206)
T 2b0c_A 196 T 196 (206)
T ss_dssp H
T ss_pred h
Confidence 3
|
| >3umg_A Haloacid dehalogenase; defluorinase, hydrolase; 2.25A {Rhodococcus jostii} | Back alignment and structure |
|---|
Probab=96.46 E-value=0.0037 Score=66.85 Aligned_cols=97 Identities=18% Similarity=0.213 Sum_probs=68.0
Q ss_pred CcCCchhHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCcEEEeecCCCceeeecCCCccccccCChHHHhccc
Q 001010 673 CPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLT 752 (1191)
Q Consensus 673 d~lK~da~~~I~~L~~agi~vvMiTGDn~~TA~~VA~~~gI~~~~~~il~~~~~~~~~~w~~~d~~~~~~~~~~~~~~~~ 752 (1191)
-++.|++.+.++.|++. +++.++|+.....+..+.+.+|+. +
T Consensus 115 ~~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~~~------f------------------------------- 156 (254)
T 3umg_A 115 LTPWPDSVPGLTAIKAE-YIIGPLSNGNTSLLLDMAKNAGIP------W------------------------------- 156 (254)
T ss_dssp CCBCTTHHHHHHHHHHH-SEEEECSSSCHHHHHHHHHHHTCC------C-------------------------------
T ss_pred CcCCcCHHHHHHHHHhC-CeEEEEeCCCHHHHHHHHHhCCCC------e-------------------------------
Confidence 36679999999999997 999999999999988888888873 0
Q ss_pred ccceEEEechhhhhhcchHHHHhhcCcceEEeecChhhHHHHHHHHhHcC---CEEEEEcCCccCHHHHhhCCceEEecc
Q 001010 753 DAHDLCIGGDCFEMLQQTSAVLRVIPYVKVFARVAPEQKELILTTFKAVG---RMTLMCGDGTNDVGALKQAHVGVALLN 829 (1191)
Q Consensus 753 ~~~~l~itG~~l~~l~~~~~~~~~l~~~~VfAR~sP~qK~~iV~~Lq~~g---~~V~m~GDG~ND~~ALk~AdVGIAl~~ 829 (1191)
+.+++++. ..+..|+- .-+-..+++.| ..++|+||+.||+.|.++|++++++.+
T Consensus 157 ---~~~~~~~~-------------------~~~~kp~~-~~~~~~~~~lgi~~~~~~~iGD~~~Di~~a~~aG~~~~~~~ 213 (254)
T 3umg_A 157 ---DVIIGSDI-------------------NRKYKPDP-QAYLRTAQVLGLHPGEVMLAAAHNGDLEAAHATGLATAFIL 213 (254)
T ss_dssp ---SCCCCHHH-------------------HTCCTTSH-HHHHHHHHHTTCCGGGEEEEESCHHHHHHHHHTTCEEEEEC
T ss_pred ---eEEEEcCc-------------------CCCCCCCH-HHHHHHHHHcCCChHHEEEEeCChHhHHHHHHCCCEEEEEe
Confidence 00011110 01112221 12222333344 469999999999999999999999997
Q ss_pred C
Q 001010 830 A 830 (1191)
Q Consensus 830 ~ 830 (1191)
.
T Consensus 214 ~ 214 (254)
T 3umg_A 214 R 214 (254)
T ss_dssp C
T ss_pred c
Confidence 4
|
| >3l8h_A Putative haloacid dehalogenase-like hydrolase; HAD superfamily, GMHB, D-glycero-D-manno-heptose-1, 7-bispho phosphatase; HET: FX1; 1.68A {Bordetella bronchiseptica} | Back alignment and structure |
|---|
Probab=96.45 E-value=0.0018 Score=66.25 Aligned_cols=28 Identities=11% Similarity=0.146 Sum_probs=26.2
Q ss_pred cCCchhHHHHHHHHhcCCcEEEEcCCCH
Q 001010 674 PIREDSAKILSELKNSSQDLAMITGDQA 701 (1191)
Q Consensus 674 ~lK~da~~~I~~L~~agi~vvMiTGDn~ 701 (1191)
++.|++.++|++|++.|+++.++|+...
T Consensus 27 ~~~~g~~~~l~~L~~~g~~~~i~Tn~~~ 54 (179)
T 3l8h_A 27 IALPGSLQAIARLTQADWTVVLATNQSG 54 (179)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEECTT
T ss_pred eECcCHHHHHHHHHHCCCEEEEEECCCc
Confidence 5789999999999999999999999885
|
| >4dcc_A Putative haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 1.65A {Bacteroides thetaiotaomicron} PDB: 4dfd_A 4f71_A 4f72_A | Back alignment and structure |
|---|
Probab=96.44 E-value=0.0037 Score=66.45 Aligned_cols=105 Identities=10% Similarity=0.059 Sum_probs=69.9
Q ss_pred cCCchhHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHH------cCCCCCCcEEEeecCCCceeeecCCCccccccCChHH
Q 001010 674 PIREDSAKILSELKNSSQDLAMITGDQALTACYVASQ------VHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKE 747 (1191)
Q Consensus 674 ~lK~da~~~I~~L~~agi~vvMiTGDn~~TA~~VA~~------~gI~~~~~~il~~~~~~~~~~w~~~d~~~~~~~~~~~ 747 (1191)
++.|++.++++.|++. +++.++|+.+...+..+.+. .|+..
T Consensus 112 ~~~~~~~~~l~~l~~~-~~~~i~Sn~~~~~~~~~~~~l~~~~~~~l~~-------------------------------- 158 (229)
T 4dcc_A 112 DIPTYKLDLLLKLREK-YVVYLLSNTNDIHWKWVCKNAFPYRTFKVED-------------------------------- 158 (229)
T ss_dssp CCCHHHHHHHHHHTTT-SEEEEEECCCHHHHHHHHHHTSCBTTBCHHH--------------------------------
T ss_pred hccHHHHHHHHHHHhc-CcEEEEECCChHHHHHHHhhhhhhccCCHHH--------------------------------
Confidence 4679999999999999 99999999998888776643 34321
Q ss_pred HhcccccceEEEechhhhhhcchHHHHhhcCcceEEeecChhhHHHHHHHHhHcCCEEEEEcCCccCHHHHhhCCceEEe
Q 001010 748 VEGLTDAHDLCIGGDCFEMLQQTSAVLRVIPYVKVFARVAPEQKELILTTFKAVGRMTLMCGDGTNDVGALKQAHVGVAL 827 (1191)
Q Consensus 748 ~~~~~~~~~l~itG~~l~~l~~~~~~~~~l~~~~VfAR~sP~qK~~iV~~Lq~~g~~V~m~GDG~ND~~ALk~AdVGIAl 827 (1191)
.++.++++.... ...-.|+-=..+++.+.-....++|+||+.||+.|.++|+++..+
T Consensus 159 ------~fd~i~~~~~~~-----------------~~KP~~~~~~~~~~~~g~~~~~~~~vGD~~~Di~~a~~aG~~~i~ 215 (229)
T 4dcc_A 159 ------YFEKTYLSYEMK-----------------MAKPEPEIFKAVTEDAGIDPKETFFIDDSEINCKVAQELGISTYT 215 (229)
T ss_dssp ------HCSEEEEHHHHT-----------------CCTTCHHHHHHHHHHHTCCGGGEEEECSCHHHHHHHHHTTCEEEC
T ss_pred ------hCCEEEeecccC-----------------CCCCCHHHHHHHHHHcCCCHHHeEEECCCHHHHHHHHHcCCEEEE
Confidence 011122222110 011122323344444443345799999999999999999999999
Q ss_pred ccCCCcc
Q 001010 828 LNAVPPT 834 (1191)
Q Consensus 828 ~~~~~e~ 834 (1191)
.+++++.
T Consensus 216 v~~~~~~ 222 (229)
T 4dcc_A 216 PKAGEDW 222 (229)
T ss_dssp CCTTCCG
T ss_pred ECCHHHH
Confidence 9876654
|
| >3k1z_A Haloacid dehalogenase-like hydrolase domain-conta protein 3; HDHD3, haloacid dehalogenase-like hydrolase domain containin structural genomics; 1.55A {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.37 E-value=0.0045 Score=67.56 Aligned_cols=104 Identities=12% Similarity=0.105 Sum_probs=70.9
Q ss_pred cCCchhHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCcEEEeecCCCceeeecCCCccccccCChHHHhcccc
Q 001010 674 PIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLTD 753 (1191)
Q Consensus 674 ~lK~da~~~I~~L~~agi~vvMiTGDn~~TA~~VA~~~gI~~~~~~il~~~~~~~~~~w~~~d~~~~~~~~~~~~~~~~~ 753 (1191)
++.|++.++++.|++.|+++.++|+.... ...+.+.+|+...
T Consensus 106 ~~~~~~~~~l~~l~~~g~~~~i~tn~~~~-~~~~l~~~gl~~~------------------------------------- 147 (263)
T 3k1z_A 106 QVLDGAEDTLRECRTRGLRLAVISNFDRR-LEGILGGLGLREH------------------------------------- 147 (263)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEEESCCTT-HHHHHHHTTCGGG-------------------------------------
T ss_pred eECcCHHHHHHHHHhCCCcEEEEeCCcHH-HHHHHHhCCcHHh-------------------------------------
Confidence 46799999999999999999999987654 5777888887421
Q ss_pred cceEEEechhhhhhcchHHHHhhcCcceEEeecChhhHHHHHHHHhHcCCEEEEEcCCc-cCHHHHhhCCceEEeccCCC
Q 001010 754 AHDLCIGGDCFEMLQQTSAVLRVIPYVKVFARVAPEQKELILTTFKAVGRMTLMCGDGT-NDVGALKQAHVGVALLNAVP 832 (1191)
Q Consensus 754 ~~~l~itG~~l~~l~~~~~~~~~l~~~~VfAR~sP~qK~~iV~~Lq~~g~~V~m~GDG~-ND~~ALk~AdVGIAl~~~~~ 832 (1191)
++.+++++... ...-.|+--..+++.+.-....++|+||+. ||+.|.++|++++++.+.+.
T Consensus 148 -f~~~~~~~~~~-----------------~~Kp~~~~~~~~~~~~g~~~~~~~~vGD~~~~Di~~a~~aG~~~i~~~~~~ 209 (263)
T 3k1z_A 148 -FDFVLTSEAAG-----------------WPKPDPRIFQEALRLAHMEPVVAAHVGDNYLCDYQGPRAVGMHSFLVVGPQ 209 (263)
T ss_dssp -CSCEEEHHHHS-----------------SCTTSHHHHHHHHHHHTCCGGGEEEEESCHHHHTHHHHTTTCEEEEECCSS
T ss_pred -hhEEEeecccC-----------------CCCCCHHHHHHHHHHcCCCHHHEEEECCCcHHHHHHHHHCCCEEEEEcCCC
Confidence 11122222110 011123333344444443345799999997 99999999999999997664
Q ss_pred c
Q 001010 833 P 833 (1191)
Q Consensus 833 e 833 (1191)
.
T Consensus 210 ~ 210 (263)
T 3k1z_A 210 A 210 (263)
T ss_dssp C
T ss_pred C
Confidence 3
|
| >2fdr_A Conserved hypothetical protein; SAD, structural genomics, agrobacter tumefaciens, HAD-superfamily hydrolase; 2.00A {Agrobacterium tumefaciens str} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=96.30 E-value=0.0043 Score=65.34 Aligned_cols=38 Identities=13% Similarity=0.107 Sum_probs=32.3
Q ss_pred cCCchhHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCC
Q 001010 674 PIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIV 714 (1191)
Q Consensus 674 ~lK~da~~~I~~L~~agi~vvMiTGDn~~TA~~VA~~~gI~ 714 (1191)
++.+++.+.++.|+. ++.++|+.+......+.+++|+.
T Consensus 87 ~~~~~~~~~l~~l~~---~~~i~s~~~~~~~~~~l~~~~l~ 124 (229)
T 2fdr_A 87 KIIDGVKFALSRLTT---PRCICSNSSSHRLDMMLTKVGLK 124 (229)
T ss_dssp CBCTTHHHHHHHCCS---CEEEEESSCHHHHHHHHHHTTCG
T ss_pred ccCcCHHHHHHHhCC---CEEEEECCChhHHHHHHHhCChH
Confidence 557889999888874 99999999998888888888874
|
| >2pke_A Haloacid delahogenase-like family hydrolase; NP_639141.1, ST genomics, joint center for structural genomics, JCSG; 1.81A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=96.29 E-value=0.0082 Score=64.64 Aligned_cols=95 Identities=9% Similarity=0.043 Sum_probs=67.4
Q ss_pred CcCCchhHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCcEEEeecCCCceeeecCCCccccccCChHHHhccc
Q 001010 673 CPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLT 752 (1191)
Q Consensus 673 d~lK~da~~~I~~L~~agi~vvMiTGDn~~TA~~VA~~~gI~~~~~~il~~~~~~~~~~w~~~d~~~~~~~~~~~~~~~~ 752 (1191)
.++.|++.++++.|+ .|+++.++|+.....+....+.+|+...-.
T Consensus 111 ~~~~~~~~~~l~~l~-~~~~~~i~t~~~~~~~~~~l~~~~l~~~f~---------------------------------- 155 (251)
T 2pke_A 111 VEVIAGVREAVAAIA-ADYAVVLITKGDLFHQEQKIEQSGLSDLFP---------------------------------- 155 (251)
T ss_dssp CCBCTTHHHHHHHHH-TTSEEEEEEESCHHHHHHHHHHHSGGGTCC----------------------------------
T ss_pred CCcCccHHHHHHHHH-CCCEEEEEeCCCHHHHHHHHHHcCcHHhCc----------------------------------
Confidence 356899999999999 999999999999888888888888741100
Q ss_pred ccceEEEechhhhhhcchHHHHhhcCcceEEeecCh--hhHHHHHHHHhHcCCEEEEEcCCc-cCHHHHhhCCceEEecc
Q 001010 753 DAHDLCIGGDCFEMLQQTSAVLRVIPYVKVFARVAP--EQKELILTTFKAVGRMTLMCGDGT-NDVGALKQAHVGVALLN 829 (1191)
Q Consensus 753 ~~~~l~itG~~l~~l~~~~~~~~~l~~~~VfAR~sP--~qK~~iV~~Lq~~g~~V~m~GDG~-ND~~ALk~AdVGIAl~~ 829 (1191)
.+++.-.| +--..+.+.+.-....++|+||+. ||+.|.+.|++++++-.
T Consensus 156 ----------------------------~i~~~~kp~~~~~~~~~~~l~~~~~~~i~iGD~~~~Di~~a~~aG~~~~~v~ 207 (251)
T 2pke_A 156 ----------------------------RIEVVSEKDPQTYARVLSEFDLPAERFVMIGNSLRSDVEPVLAIGGWGIYTP 207 (251)
T ss_dssp ----------------------------CEEEESCCSHHHHHHHHHHHTCCGGGEEEEESCCCCCCHHHHHTTCEEEECC
T ss_pred ----------------------------eeeeeCCCCHHHHHHHHHHhCcCchhEEEECCCchhhHHHHHHCCCEEEEEC
Confidence 01111122 222233344333335699999999 99999999999988764
Q ss_pred C
Q 001010 830 A 830 (1191)
Q Consensus 830 ~ 830 (1191)
.
T Consensus 208 ~ 208 (251)
T 2pke_A 208 Y 208 (251)
T ss_dssp C
T ss_pred C
Confidence 3
|
| >2hi0_A Putative phosphoglycolate phosphatase; YP_619066.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.51A {Lactobacillus delbrueckii} | Back alignment and structure |
|---|
Probab=96.29 E-value=0.0035 Score=67.29 Aligned_cols=41 Identities=7% Similarity=0.085 Sum_probs=36.3
Q ss_pred cCCchhHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCC
Q 001010 674 PIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIV 714 (1191)
Q Consensus 674 ~lK~da~~~I~~L~~agi~vvMiTGDn~~TA~~VA~~~gI~ 714 (1191)
++.|++.+.++.|++.|+++.++|+.+...+..+-+.+|+.
T Consensus 110 ~~~~g~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~ 150 (240)
T 2hi0_A 110 GPFPGILDLMKNLRQKGVKLAVVSNKPNEAVQVLVEELFPG 150 (240)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHSTT
T ss_pred CcCCCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCc
Confidence 46789999999999999999999999888888888888863
|
| >2gmw_A D,D-heptose 1,7-bisphosphate phosphatase; Zn-binding protein, hydrolase; 1.50A {Escherichia coli} SCOP: c.108.1.19 PDB: 3esq_A 3esr_A 3l1u_A 3l1v_A 3l8e_A 3l8f_A 3l8g_A* | Back alignment and structure |
|---|
Probab=96.27 E-value=0.0043 Score=65.66 Aligned_cols=42 Identities=12% Similarity=0.113 Sum_probs=36.3
Q ss_pred CcCCchhHHHHHHHHhcCCcEEEEcCCCH---------------HHHHHHHHHcCCC
Q 001010 673 CPIREDSAKILSELKNSSQDLAMITGDQA---------------LTACYVASQVHIV 714 (1191)
Q Consensus 673 d~lK~da~~~I~~L~~agi~vvMiTGDn~---------------~TA~~VA~~~gI~ 714 (1191)
-++.|++.++|+.|++.|+++.++|+... ..+..+.+++|+.
T Consensus 49 ~~~~pg~~e~L~~L~~~G~~~~ivTn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~ 105 (211)
T 2gmw_A 49 FEFIDGVIDAMRELKKMGFALVVVTNQSGIARGKFTEAQFETLTEWMDWSLADRDVD 105 (211)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEEECTHHHHTSSCHHHHHHHHHHHHHHHHHTTCC
T ss_pred CcCCcCHHHHHHHHHHCCCeEEEEECcCCcCCCccCHHHHHHHHHHHHHHHHHcCCc
Confidence 36789999999999999999999999993 6677778888873
|
| >2pr7_A Haloacid dehalogenase/epoxide hydrolase family; NP_599989.1, uncharacterized protein, structural genomics; 1.44A {Corynebacterium glutamicum atcc 13032} | Back alignment and structure |
|---|
Probab=96.22 E-value=0.0025 Score=61.60 Aligned_cols=42 Identities=7% Similarity=0.034 Sum_probs=36.7
Q ss_pred CcCCchhHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCC
Q 001010 673 CPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIV 714 (1191)
Q Consensus 673 d~lK~da~~~I~~L~~agi~vvMiTGDn~~TA~~VA~~~gI~ 714 (1191)
.++.|++.++++.|++.|+++.++|+.+...+..+.+.+|+.
T Consensus 17 ~~~~~~~~~~l~~L~~~G~~~~i~S~~~~~~~~~~l~~~~l~ 58 (137)
T 2pr7_A 17 DEDQRRWRNLLAAAKKNGVGTVILSNDPGGLGAAPIRELETN 58 (137)
T ss_dssp HHHHHHHHHHHHHHHHTTCEEEEEECSCCGGGGHHHHHHHHT
T ss_pred CccCccHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHCChH
Confidence 356789999999999999999999999988888888888763
|
| >2ah5_A COG0546: predicted phosphatases; MCSG, structural genomics, hydrola haloacid dehalogenase-like, PSI; 1.74A {Streptococcus pneumoniae} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=96.10 E-value=0.0032 Score=66.24 Aligned_cols=41 Identities=24% Similarity=0.224 Sum_probs=36.4
Q ss_pred CcCCchhHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCC
Q 001010 673 CPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIV 714 (1191)
Q Consensus 673 d~lK~da~~~I~~L~~agi~vvMiTGDn~~TA~~VA~~~gI~ 714 (1191)
.++.|++.+.++.|++ |+++.++|+.+...+..+-+.+|+.
T Consensus 83 ~~~~~g~~~~l~~L~~-~~~l~i~T~~~~~~~~~~l~~~gl~ 123 (210)
T 2ah5_A 83 AQLFPQIIDLLEELSS-SYPLYITTTKDTSTAQDMAKNLEIH 123 (210)
T ss_dssp CEECTTHHHHHHHHHT-TSCEEEEEEEEHHHHHHHHHHTTCG
T ss_pred CCCCCCHHHHHHHHHc-CCeEEEEeCCCHHHHHHHHHhcCch
Confidence 3567999999999999 9999999999888888888888885
|
| >3f9r_A Phosphomannomutase; trypanosome glycobiology structural genomics, isomerase, structural genomics consortium, SGC; 1.85A {Trypanosoma brucei} SCOP: c.108.1.0 PDB: 2i54_A* 2i55_A* | Back alignment and structure |
|---|
Probab=96.06 E-value=0.0055 Score=66.74 Aligned_cols=43 Identities=19% Similarity=0.174 Sum_probs=36.7
Q ss_pred hHHHHHHHHhHcCCEEEEEcC----CccCHHHHhhCC-ceEEeccCCC
Q 001010 790 QKELILTTFKAVGRMTLMCGD----GTNDVGALKQAH-VGVALLNAVP 832 (1191)
Q Consensus 790 qK~~iV~~Lq~~g~~V~m~GD----G~ND~~ALk~Ad-VGIAl~~~~~ 832 (1191)
.|..-++.|.+.-..|+++|| |.||.+||+.|+ +|++++++.+
T Consensus 187 ~Kg~al~~L~~~~~ev~afGD~~~~g~NDi~Ml~~a~~~g~~v~n~~~ 234 (246)
T 3f9r_A 187 DKTYCLQFVEDDFEEIHFFGDKTQEGGNDYEIYTDKRTIGHKVTSYKD 234 (246)
T ss_dssp SGGGGGGGTTTTCSEEEEEESCCSTTSTTHHHHTCTTSEEEECSSHHH
T ss_pred CHHHHHHHHHcCcccEEEEeCCCCCCCCCHHHHhCCCccEEEeCCHHH
Confidence 788888888775568999999 799999999996 8999997543
|
| >3pdw_A Uncharacterized hydrolase YUTF; structural genomics, PSI2, NYSGXRC, protein structure initia YORK SGX research center for structural genomics; 1.60A {Bacillus subtilis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=96.06 E-value=0.011 Score=64.48 Aligned_cols=41 Identities=12% Similarity=0.125 Sum_probs=34.6
Q ss_pred cCCchhHHHHHHHHhcCCcEEEEcC---CCHHHHHHHHHHcCCC
Q 001010 674 PIREDSAKILSELKNSSQDLAMITG---DQALTACYVASQVHIV 714 (1191)
Q Consensus 674 ~lK~da~~~I~~L~~agi~vvMiTG---Dn~~TA~~VA~~~gI~ 714 (1191)
.+-++++++|++|++.|++++++|| ..........+++|+.
T Consensus 22 ~~~~~~~~ai~~l~~~Gi~v~laTgrs~r~~~~~~~~l~~lg~~ 65 (266)
T 3pdw_A 22 EKIEEACEFVRTLKDRGVPYLFVTNNSSRTPKQVADKLVSFDIP 65 (266)
T ss_dssp HHHHHHHHHHHHHHHTTCCEEEEESCCSSCHHHHHHHHHHTTCC
T ss_pred EeCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCC
Confidence 3447899999999999999999988 6667777778888885
|
| >3ib6_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.20A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=96.05 E-value=0.018 Score=59.55 Aligned_cols=42 Identities=14% Similarity=0.225 Sum_probs=37.8
Q ss_pred CcCCchhHHHHHHHHhcCCcEEEEcCCCH---HHHHHHHHHcCCC
Q 001010 673 CPIREDSAKILSELKNSSQDLAMITGDQA---LTACYVASQVHIV 714 (1191)
Q Consensus 673 d~lK~da~~~I~~L~~agi~vvMiTGDn~---~TA~~VA~~~gI~ 714 (1191)
.++.|++.++++.|++.|+++.++|+-.. ..+..+.+.+|+.
T Consensus 33 ~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~~~~l~~~gl~ 77 (189)
T 3ib6_A 33 VVLRKNAKETLEKVKQLGFKQAILSNTATSDTEVIKRVLTNFGII 77 (189)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHTTCG
T ss_pred ceeCcCHHHHHHHHHHCCCEEEEEECCCccchHHHHHHHHhcCch
Confidence 57899999999999999999999998775 7888889999985
|
| >1s2o_A SPP, sucrose-phosphatase; phosphohydrolase, HAD superfamily, cyanobacteria; 1.40A {Synechocystis SP} SCOP: c.108.1.10 PDB: 1tj3_A 1tj4_A* 1tj5_A* 1u2s_A* 1u2t_A* 2b1q_A* 2b1r_A* 2d2v_A* | Back alignment and structure |
|---|
Probab=95.52 E-value=0.0048 Score=66.96 Aligned_cols=48 Identities=29% Similarity=0.410 Sum_probs=39.8
Q ss_pred hHHHHHHHHhHc-C---CEEEEEcCCccCHHHHhhCCceEEeccCCCccccc
Q 001010 790 QKELILTTFKAV-G---RMTLMCGDGTNDVGALKQAHVGVALLNAVPPTQSG 837 (1191)
Q Consensus 790 qK~~iV~~Lq~~-g---~~V~m~GDG~ND~~ALk~AdVGIAl~~~~~e~~~~ 837 (1191)
.|...++.+.+. | ..|+++||+.||.+|++.|++||+|+++.++.++.
T Consensus 162 ~K~~~l~~l~~~~~~~~~~~~~~GD~~nD~~m~~~~g~~va~~na~~~~k~~ 213 (244)
T 1s2o_A 162 NKGNATQYLQQHLAMEPSQTLVCGDSGNDIGLFETSARGVIVRNAQPELLHW 213 (244)
T ss_dssp SHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHTSSSEEEECTTCCHHHHHH
T ss_pred ChHHHHHHHHHHhCCCHHHEEEECCchhhHHHHhccCcEEEEcCCcHHHHHH
Confidence 688888887653 3 36999999999999999999999999877666553
|
| >3kbb_A Phosphorylated carbohydrates phosphatase TM_1254; hydrolase, arbohydrate metabolism, COBA magnesium, manganese, metal-binding, nickel; HET: MSE GOL; 1.74A {Thermotoga maritima MSB8} | Back alignment and structure |
|---|
Probab=95.47 E-value=0.029 Score=58.70 Aligned_cols=41 Identities=15% Similarity=0.068 Sum_probs=38.2
Q ss_pred cCCchhHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCC
Q 001010 674 PIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIV 714 (1191)
Q Consensus 674 ~lK~da~~~I~~L~~agi~vvMiTGDn~~TA~~VA~~~gI~ 714 (1191)
++.|++.++++.|++.|+++.++|+-+...+..+-+.+|+.
T Consensus 84 ~~~pg~~~~l~~L~~~g~~~~i~tn~~~~~~~~~l~~~~l~ 124 (216)
T 3kbb_A 84 KENPGVREALEFVKSKRIKLALATSTPQREALERLRRLDLE 124 (216)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCG
T ss_pred ccCccHHHHHHHHHHcCCCcccccCCcHHHHHHHHHhcCCC
Confidence 45789999999999999999999999999999999999985
|
| >3qgm_A P-nitrophenyl phosphatase (PHO2); structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 2.00A {Archaeoglobus fulgidus} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=95.21 E-value=0.04 Score=59.97 Aligned_cols=43 Identities=5% Similarity=0.026 Sum_probs=36.2
Q ss_pred cCcCCchhHHHHHHHHhcCCcEEEEcC---CCHHHHHHHHHHcCCC
Q 001010 672 NCPIREDSAKILSELKNSSQDLAMITG---DQALTACYVASQVHIV 714 (1191)
Q Consensus 672 ~d~lK~da~~~I~~L~~agi~vvMiTG---Dn~~TA~~VA~~~gI~ 714 (1191)
.+.+=|+++++|++|++.|++++++|| ..........+++|+.
T Consensus 22 ~~~~~~~~~~ai~~l~~~Gi~v~l~Tgr~~r~~~~~~~~l~~lg~~ 67 (268)
T 3qgm_A 22 SVTPIPEGVEGVKKLKELGKKIIFVSNNSTRSRRILLERLRSFGLE 67 (268)
T ss_dssp TTEECHHHHHHHHHHHHTTCEEEEEECCSSSCHHHHHHHHHHTTCC
T ss_pred CCEeCcCHHHHHHHHHHcCCeEEEEeCcCCCCHHHHHHHHHHCCCC
Confidence 444557899999999999999999999 6777777777888885
|
| >2gfh_A Haloacid dehalogenase-like hydrolase domain conta; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.90A {Mus musculus} SCOP: c.108.1.6 PDB: 2w4m_A | Back alignment and structure |
|---|
Probab=95.09 E-value=0.061 Score=58.60 Aligned_cols=41 Identities=17% Similarity=0.192 Sum_probs=36.6
Q ss_pred CcCCchhHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCC
Q 001010 673 CPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIV 714 (1191)
Q Consensus 673 d~lK~da~~~I~~L~~agi~vvMiTGDn~~TA~~VA~~~gI~ 714 (1191)
-++.|++.++++.|++ ++++.++|+.+...+..+.+.+|+.
T Consensus 120 ~~~~~g~~~~L~~L~~-~~~l~i~Tn~~~~~~~~~l~~~gl~ 160 (260)
T 2gfh_A 120 MILADDVKAMLTELRK-EVRLLLLTNGDRQTQREKIEACACQ 160 (260)
T ss_dssp CCCCHHHHHHHHHHHT-TSEEEEEECSCHHHHHHHHHHHTCG
T ss_pred CCCCcCHHHHHHHHHc-CCcEEEEECcChHHHHHHHHhcCHH
Confidence 3678999999999998 5999999999998888888899884
|
| >3pct_A Class C acid phosphatase; hydrolase, outer membrane; 1.85A {Pasteurella multocida} | Back alignment and structure |
|---|
Probab=94.88 E-value=0.022 Score=62.25 Aligned_cols=85 Identities=9% Similarity=0.173 Sum_probs=63.2
Q ss_pred cCcCCchhHHHHHHHHhcCCcEEEEcCCCH----HHHHHHHHHcCCCCCCcEEEeecCCCceeeecCCCccccccCChHH
Q 001010 672 NCPIREDSAKILSELKNSSQDLAMITGDQA----LTACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKE 747 (1191)
Q Consensus 672 ~d~lK~da~~~I~~L~~agi~vvMiTGDn~----~TA~~VA~~~gI~~~~~~il~~~~~~~~~~w~~~d~~~~~~~~~~~ 747 (1191)
+.++.|++.+.++.|++.|+++.++||... ..+..-.+++||..-..
T Consensus 99 ~~~~~pg~~ell~~L~~~G~~i~ivTgR~~~~~r~~T~~~L~~lGi~~~~~----------------------------- 149 (260)
T 3pct_A 99 QSAAIPGAVEFSNYVNANGGTMFFVSNRRDDVEKAGTVDDMKRLGFTGVND----------------------------- 149 (260)
T ss_dssp CCEECTTHHHHHHHHHHTTCEEEEEEEEETTTSHHHHHHHHHHHTCCCCST-----------------------------
T ss_pred CCCCCccHHHHHHHHHHCCCeEEEEeCCCccccHHHHHHHHHHcCcCcccc-----------------------------
Confidence 467889999999999999999999999865 36666677789852100
Q ss_pred HhcccccceEEEechhhhhhcchHHHHhhcCcceEEeecChhhHHHHHHHHhHcCC-EEEEEcCCccCHHH
Q 001010 748 VEGLTDAHDLCIGGDCFEMLQQTSAVLRVIPYVKVFARVAPEQKELILTTFKAVGR-MTLMCGDGTNDVGA 817 (1191)
Q Consensus 748 ~~~~~~~~~l~itG~~l~~l~~~~~~~~~l~~~~VfAR~sP~qK~~iV~~Lq~~g~-~V~m~GDG~ND~~A 817 (1191)
-.++-|-....|....+.|++.|+ +|+++||-.+|.++
T Consensus 150 --------------------------------~~Lilr~~~~~K~~~r~~L~~~gy~iv~~iGD~~~Dl~~ 188 (260)
T 3pct_A 150 --------------------------------KTLLLKKDKSNKSVRFKQVEDMGYDIVLFVGDNLNDFGD 188 (260)
T ss_dssp --------------------------------TTEEEESSCSSSHHHHHHHHTTTCEEEEEEESSGGGGCG
T ss_pred --------------------------------ceeEecCCCCChHHHHHHHHhcCCCEEEEECCChHHcCc
Confidence 012222223568888888888665 78999999999875
|
| >2o2x_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; 1.50A {Mesorhizobium loti} SCOP: c.108.1.19 | Back alignment and structure |
|---|
Probab=94.85 E-value=0.041 Score=58.20 Aligned_cols=41 Identities=5% Similarity=0.067 Sum_probs=36.4
Q ss_pred CcCCchhHHHHHHHHhcCCcEEEEcCCCH---------------HHHHHHHHHcCC
Q 001010 673 CPIREDSAKILSELKNSSQDLAMITGDQA---------------LTACYVASQVHI 713 (1191)
Q Consensus 673 d~lK~da~~~I~~L~~agi~vvMiTGDn~---------------~TA~~VA~~~gI 713 (1191)
.++.|++.++|+.|++.|+++.++|+... ..+..+.+++|+
T Consensus 55 ~~~~~g~~e~L~~L~~~G~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl 110 (218)
T 2o2x_A 55 IVLRPQMLPAIATANRAGIPVVVVTNQSGIARGYFGWSAFAAVNGRVLELLREEGV 110 (218)
T ss_dssp CCBCGGGHHHHHHHHHHTCCEEEEEECHHHHTTSCCHHHHHHHHHHHHHHHHHTTC
T ss_pred CeECcCHHHHHHHHHHCCCEEEEEcCcCCCCcccccHHHHHHHHHHHHHHHHHcCC
Confidence 57789999999999999999999999887 567778888887
|
| >3vay_A HAD-superfamily hydrolase; rossmann fold, haloacid dehalogenase; 1.98A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=94.79 E-value=0.059 Score=56.57 Aligned_cols=96 Identities=17% Similarity=0.196 Sum_probs=59.7
Q ss_pred cCCchhHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCcEEEeecCCCceeeecCCCccccccCChHHHhcccc
Q 001010 674 PIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLTD 753 (1191)
Q Consensus 674 ~lK~da~~~I~~L~~agi~vvMiTGDn~~TA~~VA~~~gI~~~~~~il~~~~~~~~~~w~~~d~~~~~~~~~~~~~~~~~ 753 (1191)
++.|++.++++.|++. +++.++|+.+.. -+.+|+..
T Consensus 105 ~~~~~~~~~l~~l~~~-~~~~i~t~~~~~-----l~~~~l~~-------------------------------------- 140 (230)
T 3vay_A 105 QIFPEVQPTLEILAKT-FTLGVITNGNAD-----VRRLGLAD-------------------------------------- 140 (230)
T ss_dssp CBCTTHHHHHHHHHTT-SEEEEEESSCCC-----GGGSTTGG--------------------------------------
T ss_pred ccCcCHHHHHHHHHhC-CeEEEEECCchh-----hhhcCcHH--------------------------------------
Confidence 5679999999999998 999999987654 23444421
Q ss_pred cceEEEechhhhhhcchHHHHhhcCcceEEeecChhhHHHHHHHHhHcCCEEEEEcCCc-cCHHHHhhCCceEEeccC
Q 001010 754 AHDLCIGGDCFEMLQQTSAVLRVIPYVKVFARVAPEQKELILTTFKAVGRMTLMCGDGT-NDVGALKQAHVGVALLNA 830 (1191)
Q Consensus 754 ~~~l~itG~~l~~l~~~~~~~~~l~~~~VfAR~sP~qK~~iV~~Lq~~g~~V~m~GDG~-ND~~ALk~AdVGIAl~~~ 830 (1191)
.++.+++++.... ..-.|+--..+.+.+.-....++|+||+. ||+.|.+.|+++.++-+.
T Consensus 141 ~f~~~~~~~~~~~-----------------~kp~~~~~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~aG~~~~~v~~ 201 (230)
T 3vay_A 141 YFAFALCAEDLGI-----------------GKPDPAPFLEALRRAKVDASAAVHVGDHPSDDIAGAQQAGMRAIWYNP 201 (230)
T ss_dssp GCSEEEEHHHHTC-----------------CTTSHHHHHHHHHHHTCCGGGEEEEESCTTTTHHHHHHTTCEEEEECT
T ss_pred HeeeeEEccccCC-----------------CCcCHHHHHHHHHHhCCCchheEEEeCChHHHHHHHHHCCCEEEEEcC
Confidence 1122222221100 01112222333344433335699999998 999999999999888543
|
| >2fue_A PMM 1, PMMH-22, phosphomannomutase 1; enzyme-product complex, protein glycosyl carbohydrate-deficient glycoprotein syndrome; HET: MSE M1P; 1.75A {Homo sapiens} SCOP: c.108.1.10 PDB: 2fuc_A* | Back alignment and structure |
|---|
Probab=94.72 E-value=0.0061 Score=66.84 Aligned_cols=55 Identities=16% Similarity=0.206 Sum_probs=41.7
Q ss_pred hHHHHHHHHhHcC---CEEEEEcC----CccCHHHHhhCC-ceEEeccCCCccccccCCcccccc
Q 001010 790 QKELILTTFKAVG---RMTLMCGD----GTNDVGALKQAH-VGVALLNAVPPTQSGNSSSEASKD 846 (1191)
Q Consensus 790 qK~~iV~~Lq~~g---~~V~m~GD----G~ND~~ALk~Ad-VGIAl~~~~~e~~~~asdi~~~~~ 846 (1191)
.|..-++.| .| ..|+++|| |.||.+||+.|+ +|+||+|+.+++++.+..++.+++
T Consensus 197 sKg~al~~l--~gi~~~~viafGDs~~~~~NDi~Ml~~~~~~g~av~NA~~~~k~~a~~v~~~~~ 259 (262)
T 2fue_A 197 DKRYCLDSL--DQDSFDTIHFFGNETSPGGNDFEIFADPRTVGHSVVSPQDTVQRCREIFFPETA 259 (262)
T ss_dssp STTHHHHHH--TTSCCSEEEEEESCCSTTSTTHHHHHSTTSEEEECSSHHHHHHHHHHHHCTTC-
T ss_pred CHHHHHHHH--HCCCHHHEEEECCCCCCCCCCHHHHhcCccCcEEecCCCHHHHHhhheeCCCCc
Confidence 588888888 43 57999999 999999999999 699999877666554444444433
|
| >1vjr_A 4-nitrophenylphosphatase; TM1742, structural genomics, JCSG, protein structure initiative, joint center for structural G hydrolase; 2.40A {Thermotoga maritima} SCOP: c.108.1.14 PDB: 1pw5_A* | Back alignment and structure |
|---|
Probab=94.60 E-value=0.079 Score=57.65 Aligned_cols=42 Identities=14% Similarity=0.101 Sum_probs=37.7
Q ss_pred CcCCchhHHHHHHHHhcCCcEEEEc---CCCHHHHHHHHHHcCCC
Q 001010 673 CPIREDSAKILSELKNSSQDLAMIT---GDQALTACYVASQVHIV 714 (1191)
Q Consensus 673 d~lK~da~~~I~~L~~agi~vvMiT---GDn~~TA~~VA~~~gI~ 714 (1191)
.++-+++.++|++|++.|++++++| |..........+++|+.
T Consensus 32 ~~~~~~~~~~l~~l~~~G~~~~~aTn~~gr~~~~~~~~~~~lg~~ 76 (271)
T 1vjr_A 32 DSLLPGSLEFLETLKEKNKRFVFFTNNSSLGAQDYVRKLRNMGVD 76 (271)
T ss_dssp TEECTTHHHHHHHHHHTTCEEEEEESCTTSCHHHHHHHHHHTTCC
T ss_pred CEECcCHHHHHHHHHHcCCeEEEEECCCCCCHHHHHHHHHHcCCC
Confidence 5667899999999999999999999 88888888888999885
|
| >3epr_A Hydrolase, haloacid dehalogenase-like family; structural genomics, unknown function, HAD superfamily hydro PSI-2; 1.55A {Streptococcus agalactiae serogroup V} SCOP: c.108.1.14 PDB: 1ys9_A 1wvi_A 1ydf_A | Back alignment and structure |
|---|
Probab=94.37 E-value=0.083 Score=57.51 Aligned_cols=41 Identities=7% Similarity=0.134 Sum_probs=36.6
Q ss_pred CcCCchhHHHHHHHHhcCCcEEEEc---CCCHHHHHHHHHHcCCC
Q 001010 673 CPIREDSAKILSELKNSSQDLAMIT---GDQALTACYVASQVHIV 714 (1191)
Q Consensus 673 d~lK~da~~~I~~L~~agi~vvMiT---GDn~~TA~~VA~~~gI~ 714 (1191)
.++ |+++++|++++++|++++++| |..........+++|+.
T Consensus 21 ~~i-~~~~eal~~l~~~G~~vvl~Tn~~gr~~~~~~~~l~~lg~~ 64 (264)
T 3epr_A 21 SRI-PAGERFIERLQEKGIPYMLVTNNTTRTPESVQEMLRGFNVE 64 (264)
T ss_dssp EEC-HHHHHHHHHHHHHTCCEEEEECCCSSCHHHHHHHHHTTTCC
T ss_pred EEC-cCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHCCCC
Confidence 456 899999999999999999999 78888888888899985
|
| >3ocu_A Lipoprotein E; hydrolase, outer membrane; HET: NMN; 1.35A {Haemophilus influenzae} PDB: 3ocv_A* 3ocw_A* 3ocx_A* 3ocz_A* 3ocy_A* 3sf0_A* 2hlk_A 2hll_A 3et4_A 3et5_A | Back alignment and structure |
|---|
Probab=93.90 E-value=0.047 Score=59.70 Aligned_cols=83 Identities=10% Similarity=0.139 Sum_probs=61.9
Q ss_pred cCcCCchhHHHHHHHHhcCCcEEEEcCCCH----HHHHHHHHHcCCCCCC--cEEEeecCCCceeeecCCCccccccCCh
Q 001010 672 NCPIREDSAKILSELKNSSQDLAMITGDQA----LTACYVASQVHIVTKP--VLILCPVKNGKVYEWVSPDETEKIQYSE 745 (1191)
Q Consensus 672 ~d~lK~da~~~I~~L~~agi~vvMiTGDn~----~TA~~VA~~~gI~~~~--~~il~~~~~~~~~~w~~~d~~~~~~~~~ 745 (1191)
+.++.|++.+.++.|++.|+++.+|||.+. ..+..-.+++||..-. .
T Consensus 99 ~~~~~pG~~ell~~L~~~G~ki~ivTgR~~~~~r~~T~~~L~~lGi~~~~~~~--------------------------- 151 (262)
T 3ocu_A 99 QSRAVPGAVEFNNYVNSHNGKVFYVTNRKDSTEKSGTIDDMKRLGFNGVEESA--------------------------- 151 (262)
T ss_dssp CCEECTTHHHHHHHHHHTTEEEEEEEEEETTTTHHHHHHHHHHHTCSCCSGGG---------------------------
T ss_pred CCCCCccHHHHHHHHHHCCCeEEEEeCCCccchHHHHHHHHHHcCcCcccccc---------------------------
Confidence 467889999999999999999999999865 3566667778885211 1
Q ss_pred HHHhcccccceEEEechhhhhhcchHHHHhhcCcceEEeecChhhHHHHHHHHhHcCC-EEEEEcCCccCHHH
Q 001010 746 KEVEGLTDAHDLCIGGDCFEMLQQTSAVLRVIPYVKVFARVAPEQKELILTTFKAVGR-MTLMCGDGTNDVGA 817 (1191)
Q Consensus 746 ~~~~~~~~~~~l~itG~~l~~l~~~~~~~~~l~~~~VfAR~sP~qK~~iV~~Lq~~g~-~V~m~GDG~ND~~A 817 (1191)
++-|-.-..|....+.+.+.|+ .|+++||-.+|.++
T Consensus 152 ------------------------------------Lilr~~~~~K~~~r~~l~~~Gy~iv~~vGD~~~Dl~~ 188 (262)
T 3ocu_A 152 ------------------------------------FYLKKDKSAKAARFAEIEKQGYEIVLYVGDNLDDFGN 188 (262)
T ss_dssp ------------------------------------EEEESSCSCCHHHHHHHHHTTEEEEEEEESSGGGGCS
T ss_pred ------------------------------------eeccCCCCChHHHHHHHHhcCCCEEEEECCChHHhcc
Confidence 2222222457778888887765 78999999999864
|
| >1ltq_A Polynucleotide kinase; phosphatase, alpha/beta, P-loop, transferase; HET: ADP; 2.33A {Enterobacteria phage T4} SCOP: c.108.1.9 c.37.1.1 PDB: 1rc8_A* 1rpz_A* 1rrc_A* 2ia5_A | Back alignment and structure |
|---|
Probab=93.79 E-value=0.076 Score=59.11 Aligned_cols=98 Identities=13% Similarity=-0.032 Sum_probs=66.5
Q ss_pred cccCcCCchhHHHHHHHHhcCCcEEEEcCCCHHHH---HHHHHH--------cCCCCCCcEEEeecCCCceeeecCCCcc
Q 001010 670 VFNCPIREDSAKILSELKNSSQDLAMITGDQALTA---CYVASQ--------VHIVTKPVLILCPVKNGKVYEWVSPDET 738 (1191)
Q Consensus 670 ~~~d~lK~da~~~I~~L~~agi~vvMiTGDn~~TA---~~VA~~--------~gI~~~~~~il~~~~~~~~~~w~~~d~~ 738 (1191)
..+.++.|++.++++.|++.|+++.++||-....+ ...-+. .|+. -. .+
T Consensus 184 ~~~~~~~~g~~e~L~~L~~~g~~~~v~T~k~~~~~~~~~~~l~~~~~~~~~~~~~~-~~-~~------------------ 243 (301)
T 1ltq_A 184 CDTDVINPMVVELSKMYALMGYQIVVVSGRESGTKEDPTKYYRMTRKWVEDIAGVP-LV-MQ------------------ 243 (301)
T ss_dssp GGGCCBCHHHHHHHHHHHHTTCEEEEEECSCCCCSSSTTHHHHHHHHHHHHTTCCC-CS-EE------------------
T ss_pred ccccCCChHHHHHHHHHHHCCCeEEEEeCCCcccchhHHHHHHhcccccccccCCC-ch-he------------------
Confidence 45788999999999999999999999999875433 222333 5661 11 11
Q ss_pred ccccCChHHHhcccccceEEEechhhhhhcchHHHHhhcCcceEEeecChhhHHHHHHHHhHcCCE-EEEEcCCccCHHH
Q 001010 739 EKIQYSEKEVEGLTDAHDLCIGGDCFEMLQQTSAVLRVIPYVKVFARVAPEQKELILTTFKAVGRM-TLMCGDGTNDVGA 817 (1191)
Q Consensus 739 ~~~~~~~~~~~~~~~~~~l~itG~~l~~l~~~~~~~~~l~~~~VfAR~sP~qK~~iV~~Lq~~g~~-V~m~GDG~ND~~A 817 (1191)
+++.. .-.+-.|+-|..+.+.+....+. ++|+||..+|+.|
T Consensus 244 --------------------~~~~~------------------~~~kp~p~~~~~~~~~~~~~~~~~~~~vgD~~~di~~ 285 (301)
T 1ltq_A 244 --------------------CQREQ------------------GDTRKDDVVKEEIFWKHIAPHFDVKLAIDDRTQVVEM 285 (301)
T ss_dssp --------------------EECCT------------------TCCSCHHHHHHHHHHHHTTTTCEEEEEEECCHHHHHH
T ss_pred --------------------eeccC------------------CCCcHHHHHHHHHHHHHhccccceEEEeCCcHHHHHH
Confidence 11110 00122366777777777544434 6899999999999
Q ss_pred HhhCCceE
Q 001010 818 LKQAHVGV 825 (1191)
Q Consensus 818 Lk~AdVGI 825 (1191)
-++|++-.
T Consensus 286 a~~aG~~~ 293 (301)
T 1ltq_A 286 WRRIGVEC 293 (301)
T ss_dssp HHHTTCCE
T ss_pred HHHcCCeE
Confidence 99998853
|
| >2arf_A Wilson disease ATPase; P-type ATPase,ATP7B, copper transport, nucleotide binding, ATP binding, hydrolase; NMR {Homo sapiens} PDB: 2koy_A | Back alignment and structure |
|---|
Probab=93.48 E-value=0.26 Score=50.04 Aligned_cols=53 Identities=13% Similarity=0.211 Sum_probs=42.7
Q ss_pred EEEEeCcHHHHHHhccCChHHHHHHHHHHHHhcCeeeeEEEEeCCCCChhhhhhccccccccCeEEeeeecccC
Q 001010 600 FAFVKGAPETIQDRLTDLPSSYIETYKKYTHQGSRVLALAFKSLPDMTVSDARSLHRDEVENGLTFAGFAVFNC 673 (1191)
Q Consensus 600 ~~~~KGapE~I~~~~~~~p~~~~~~~~~~a~~G~RVLalA~k~l~~~~~~~~~~~~r~~~E~dL~flG~l~~~d 673 (1191)
+.+.-|+++.+.+....+|+...+....+..+|..++.+|. |..++|++.+.|
T Consensus 113 ~~v~iGn~~~m~~~gi~~~~~~~~~~~~~~~~G~T~v~va~---------------------dg~~~g~i~l~D 165 (165)
T 2arf_A 113 FSVLIGNREWLRRNGLTISSDVSDAMTDHEMKGQTAILVAI---------------------DGVLCGMIAIAD 165 (165)
T ss_dssp EEEEEECHHHHHHHHCSSCHHHHHHHHHHHTTTSEEEEEEE---------------------TTEEEEEEEECC
T ss_pred eEEEEcCHHHHHhcCCCCCHHHHHHHHHHHhCCCeEEEEEE---------------------CCEEEEEEEEEC
Confidence 35667999999887667787777777888889999998884 556899998876
|
| >2c4n_A Protein NAGD; nucleotide phosphatase, HAD superfamily, UMP phosphatase, carbohydrate metabolism, hydrolase; 1.8A {Escherichia coli} SCOP: c.108.1.14 | Back alignment and structure |
|---|
Probab=93.18 E-value=0.089 Score=55.59 Aligned_cols=38 Identities=11% Similarity=0.143 Sum_probs=31.2
Q ss_pred chhHHHHHHHHhcCCcEEEEc---CCCHHHHHHHHHHcCCC
Q 001010 677 EDSAKILSELKNSSQDLAMIT---GDQALTACYVASQVHIV 714 (1191)
Q Consensus 677 ~da~~~I~~L~~agi~vvMiT---GDn~~TA~~VA~~~gI~ 714 (1191)
+++.++++.|++.|++++.+| |...........+.|+.
T Consensus 22 ~~~~~~~~~l~~~g~~~~~~t~~~g~~~~~~~~~~~~~g~~ 62 (250)
T 2c4n_A 22 PGAAEFLHGIMDKGLPLVLLTNYPSQTGQDLANRFATAGVD 62 (250)
T ss_dssp TTHHHHHHHHHHTTCCEEEEESCCSCCHHHHHHHHHHTTCC
T ss_pred cCHHHHHHHHHHcCCcEEEEECCCCCCHHHHHHHHHHcCCC
Confidence 445889999999999999999 88877777777777774
|
| >2zg6_A Putative uncharacterized protein ST2620, probable 2-haloalkanoic; probable 2-haloalkanoic acid dehalogenase, hydrolase, structural genomics; 2.40A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
Probab=93.17 E-value=0.055 Score=56.94 Aligned_cols=40 Identities=15% Similarity=0.270 Sum_probs=34.6
Q ss_pred cCCchhHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCC
Q 001010 674 PIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIV 714 (1191)
Q Consensus 674 ~lK~da~~~I~~L~~agi~vvMiTGDn~~TA~~VA~~~gI~ 714 (1191)
++.|++.++++.|++.|+++.++|+... .+..+.+.+|+.
T Consensus 95 ~~~~~~~~~l~~l~~~g~~~~i~Tn~~~-~~~~~l~~~gl~ 134 (220)
T 2zg6_A 95 FLYDDTLEFLEGLKSNGYKLALVSNASP-RVKTLLEKFDLK 134 (220)
T ss_dssp EECTTHHHHHHHHHTTTCEEEECCSCHH-HHHHHHHHHTCG
T ss_pred eECcCHHHHHHHHHHCCCEEEEEeCCcH-HHHHHHHhcCcH
Confidence 5679999999999999999999999866 467788888874
|
| >2oda_A Hypothetical protein pspto_2114; haloacid dehalogenase, phosphonoacetaldehyde hydrolase, protein binding; HET: EPE; 1.90A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=92.99 E-value=0.17 Score=52.67 Aligned_cols=36 Identities=14% Similarity=0.126 Sum_probs=30.8
Q ss_pred CcCCchhHHHHHHHHhcCCcEEEEcCCCHHHHHHHH
Q 001010 673 CPIREDSAKILSELKNSSQDLAMITGDQALTACYVA 708 (1191)
Q Consensus 673 d~lK~da~~~I~~L~~agi~vvMiTGDn~~TA~~VA 708 (1191)
.++.|++.++++.|++.|+++.++||.....+..++
T Consensus 35 ~~~~pg~~e~L~~L~~~g~~~~i~T~~~~~~~~~~~ 70 (196)
T 2oda_A 35 AQLTPGAQNALKALRDQGMPCAWIDELPEALSTPLA 70 (196)
T ss_dssp GSBCTTHHHHHHHHHHHTCCEEEECCSCHHHHHHHH
T ss_pred CCcCcCHHHHHHHHHHCCCEEEEEcCChHHHHHHhc
Confidence 367899999999999999999999998877664444
|
| >1qyi_A ZR25, hypothetical protein; structural genomics, PSI, protein structure initiative, NORT structural genomics consortium, NESG; 2.50A {Staphylococcus aureus subsp} SCOP: c.108.1.13 | Back alignment and structure |
|---|
Probab=92.48 E-value=0.088 Score=61.02 Aligned_cols=42 Identities=14% Similarity=0.219 Sum_probs=38.6
Q ss_pred CcCCchhHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCC
Q 001010 673 CPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIV 714 (1191)
Q Consensus 673 d~lK~da~~~I~~L~~agi~vvMiTGDn~~TA~~VA~~~gI~ 714 (1191)
-++.|++.++++.|+++|+++.++|+-....+..+-+..|+.
T Consensus 214 ~~l~pGv~elL~~Lk~~Gi~laIvTn~~~~~~~~~L~~lgL~ 255 (384)
T 1qyi_A 214 LRPVDEVKVLLNDLKGAGFELGIATGRPYTETVVPFENLGLL 255 (384)
T ss_dssp SSCHHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCG
T ss_pred CCcCcCHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHcCCh
Confidence 467899999999999999999999999999998888889985
|
| >2fpr_A Histidine biosynthesis bifunctional protein HISB; histidinola phosphate phosphatase, bifunctional enzyme structural genomics; 1.70A {Escherichia coli} SCOP: c.108.1.19 PDB: 2fps_A 2fpu_A* 2fpx_A 2fpw_A* | Back alignment and structure |
|---|
Probab=91.56 E-value=0.079 Score=54.19 Aligned_cols=43 Identities=14% Similarity=0.117 Sum_probs=36.3
Q ss_pred cCcCCchhHHHHHHHHhcCCcEEEEcCC---------------CHHHHHHHHHHcCCC
Q 001010 672 NCPIREDSAKILSELKNSSQDLAMITGD---------------QALTACYVASQVHIV 714 (1191)
Q Consensus 672 ~d~lK~da~~~I~~L~~agi~vvMiTGD---------------n~~TA~~VA~~~gI~ 714 (1191)
.-++.|++.++|+.|++.|+++.++|+- ....+..+.+..|+.
T Consensus 40 ~~~~~pg~~e~L~~L~~~G~~l~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~ 97 (176)
T 2fpr_A 40 KLAFEPGVIPQLLKLQKAGYKLVMITNQDGLGTQSFPQADFDGPHNLMMQIFTSQGVQ 97 (176)
T ss_dssp GCCBCTTHHHHHHHHHHTTEEEEEEEECTTTTBTTBCHHHHHHHHHHHHHHHHHTTCC
T ss_pred HCcCCccHHHHHHHHHHCCCEEEEEECCccccccccchHhhhhhHHHHHHHHHHcCCC
Confidence 3467899999999999999999999997 355677788888873
|
| >4gib_A Beta-phosphoglucomutase; rossmann fold, HAD-like, structural genomics, center for structural genomics of infectious DISE csgid, isomerase; 2.27A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=91.46 E-value=0.33 Score=52.20 Aligned_cols=99 Identities=14% Similarity=0.175 Sum_probs=63.3
Q ss_pred CcCCchhHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCcEEEeecCCCceeeecCCCccccccCChHHHhccc
Q 001010 673 CPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLT 752 (1191)
Q Consensus 673 d~lK~da~~~I~~L~~agi~vvMiTGDn~~TA~~VA~~~gI~~~~~~il~~~~~~~~~~w~~~d~~~~~~~~~~~~~~~~ 752 (1191)
.++.|++.+.++.|++.|+++.+.|+-. .+..+-+.+|+.+.
T Consensus 115 ~~~~p~~~~ll~~Lk~~g~~i~i~~~~~--~~~~~L~~~gl~~~------------------------------------ 156 (250)
T 4gib_A 115 NDILPGIESLLIDVKSNNIKIGLSSASK--NAINVLNHLGISDK------------------------------------ 156 (250)
T ss_dssp GGSCTTHHHHHHHHHHTTCEEEECCSCT--THHHHHHHHTCGGG------------------------------------
T ss_pred cccchhHHHHHHHHHhcccccccccccc--hhhhHhhhcccccc------------------------------------
Confidence 4678999999999999999988776543 45667788888521
Q ss_pred ccceEEEechhhhhhcchHHHHhhcCcceEEeecChhhHHHHHHHHhHcCCEEEEEcCCccCHHHHhhCCc-eEEec
Q 001010 753 DAHDLCIGGDCFEMLQQTSAVLRVIPYVKVFARVAPEQKELILTTFKAVGRMTLMCGDGTNDVGALKQAHV-GVALL 828 (1191)
Q Consensus 753 ~~~~l~itG~~l~~l~~~~~~~~~l~~~~VfAR~sP~qK~~iV~~Lq~~g~~V~m~GDG~ND~~ALk~AdV-GIAl~ 828 (1191)
++.+++++.... ..=.|+-=..+++.+.-....++|+||..+|+.|-++|++ .|++.
T Consensus 157 --Fd~i~~~~~~~~-----------------~KP~p~~~~~a~~~lg~~p~e~l~VGDs~~Di~aA~~aG~~~i~v~ 214 (250)
T 4gib_A 157 --FDFIADAGKCKN-----------------NKPHPEIFLMSAKGLNVNPQNCIGIEDASAGIDAINSANMFSVGVG 214 (250)
T ss_dssp --CSEECCGGGCCS-----------------CTTSSHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHTTCEEEEES
T ss_pred --cceeecccccCC-----------------CCCcHHHHHHHHHHhCCChHHeEEECCCHHHHHHHHHcCCEEEEEC
Confidence 122222222110 0112222233344443333569999999999999999997 55554
|
| >2p11_A Hypothetical protein; putative haloacid dehalogenase-like hydrolase, structural GE joint center for structural genomics, JCSG; 2.20A {Burkholderia xenovorans} | Back alignment and structure |
|---|
Probab=91.31 E-value=0.39 Score=50.77 Aligned_cols=41 Identities=5% Similarity=0.047 Sum_probs=37.0
Q ss_pred CcCCchhHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCC
Q 001010 673 CPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIV 714 (1191)
Q Consensus 673 d~lK~da~~~I~~L~~agi~vvMiTGDn~~TA~~VA~~~gI~ 714 (1191)
.++.|++.++++.|++.| ++.++|+-+...+..+.+.+|+.
T Consensus 95 ~~~~~g~~~~l~~l~~~g-~~~i~Tn~~~~~~~~~l~~~gl~ 135 (231)
T 2p11_A 95 SRVYPGALNALRHLGARG-PTVILSDGDVVFQPRKIARSGLW 135 (231)
T ss_dssp GGBCTTHHHHHHHHHTTS-CEEEEEECCSSHHHHHHHHTTHH
T ss_pred CCcCccHHHHHHHHHhCC-CEEEEeCCCHHHHHHHHHHcCcH
Confidence 478999999999999999 99999999988888888888873
|
| >2amy_A PMM 2, phosphomannomutase 2; HS.459855, HS.313504, BC008310, phosphatase, PFAM PF03332, H superfamily, jaecken disease; 2.09A {Homo sapiens} SCOP: c.108.1.10 PDB: 2q4r_A | Back alignment and structure |
|---|
Probab=91.23 E-value=0.031 Score=60.41 Aligned_cols=47 Identities=17% Similarity=0.230 Sum_probs=33.4
Q ss_pred hHHHHHHHH-hHcCCEEEEEcC----CccCHHHHhhCCc-eEEeccCCCcccc
Q 001010 790 QKELILTTF-KAVGRMTLMCGD----GTNDVGALKQAHV-GVALLNAVPPTQS 836 (1191)
Q Consensus 790 qK~~iV~~L-q~~g~~V~m~GD----G~ND~~ALk~AdV-GIAl~~~~~e~~~ 836 (1191)
.|..-++.| .-....|+++|| |.||.+||+.|+. |+||+|+.+++++
T Consensus 188 ~Kg~al~~l~~i~~~~viafGD~~~~~~ND~~Ml~~a~~ag~av~Na~~~vk~ 240 (246)
T 2amy_A 188 DKRYCLRHVENDGYKTIYFFGDKTMPGGNDHEIFTDPRTMGYSVTAPEDTRRI 240 (246)
T ss_dssp SGGGGGGGTTTSCCSEEEEEECSCC---CCCHHHHCTTEEEEECSSHHHHHHH
T ss_pred chHHHHHHHhCCCHHHEEEECCCCCCCCCcHHHHHhCCcceEEeeCCCHHHHH
Confidence 455555555 112357999999 9999999999987 9999987666544
|
| >4as2_A Phosphorylcholine phosphatase; hydrolase, HAD superfamily, alkylammonium compounds; HET: BTB; 2.12A {Pseudomonas aeruginosa} PDB: 4as3_A* | Back alignment and structure |
|---|
Probab=90.97 E-value=0.25 Score=55.93 Aligned_cols=38 Identities=11% Similarity=0.163 Sum_probs=36.0
Q ss_pred cCCchhHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHc
Q 001010 674 PIREDSAKILSELKNSSQDLAMITGDQALTACYVASQV 711 (1191)
Q Consensus 674 ~lK~da~~~I~~L~~agi~vvMiTGDn~~TA~~VA~~~ 711 (1191)
.+.|++++.++.|++.|++|++|||=+......+|.++
T Consensus 143 ~~~~~~~~l~~~l~~~G~~v~ivSas~~~~v~~~a~~~ 180 (327)
T 4as2_A 143 RVFSGQRELYNKLMENGIEVYVISAAHEELVRMVAADP 180 (327)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHTCG
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHhhc
Confidence 56799999999999999999999999999999999986
|
| >2i33_A Acid phosphatase; HAD superfamily, hydrolase; 1.57A {Bacillus anthracis} PDB: 2i34_A | Back alignment and structure |
|---|
Probab=90.66 E-value=0.2 Score=54.78 Aligned_cols=42 Identities=12% Similarity=0.047 Sum_probs=33.5
Q ss_pred CcCCchhHHHHHHHHhcCCcEEEEcCCCHHH---HHHHHHHcCCC
Q 001010 673 CPIREDSAKILSELKNSSQDLAMITGDQALT---ACYVASQVHIV 714 (1191)
Q Consensus 673 d~lK~da~~~I~~L~~agi~vvMiTGDn~~T---A~~VA~~~gI~ 714 (1191)
.++-|++.++|+.|++.|+++.++||..... ....-+.+|+.
T Consensus 100 ~~~~pg~~e~L~~L~~~Gi~i~iaTnr~~~~~~~~~~~L~~~Gl~ 144 (258)
T 2i33_A 100 AEALPGSIDFLKYTESKGVDIYYISNRKTNQLDATIKNLERVGAP 144 (258)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEEEEEEGGGHHHHHHHHHHHTCS
T ss_pred CCcCccHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHHHHHcCCC
Confidence 4677999999999999999999999988443 34444666774
|
| >1yns_A E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo sapiens} SCOP: c.108.1.22 PDB: 1zs9_A | Back alignment and structure |
|---|
Probab=90.24 E-value=0.3 Score=53.13 Aligned_cols=39 Identities=3% Similarity=0.049 Sum_probs=33.7
Q ss_pred CcCCchhHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHc
Q 001010 673 CPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQV 711 (1191)
Q Consensus 673 d~lK~da~~~I~~L~~agi~vvMiTGDn~~TA~~VA~~~ 711 (1191)
.++.|++.++++.|++.|+++.++|.-+...+..+-+.+
T Consensus 129 ~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~ 167 (261)
T 1yns_A 129 AEFFADVVPAVRKWREAGMKVYIYSSGSVEAQKLLFGHS 167 (261)
T ss_dssp BCCCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHTB
T ss_pred cccCcCHHHHHHHHHhCCCeEEEEeCCCHHHHHHHHHhh
Confidence 478999999999999999999999999888777665544
|
| >2x4d_A HLHPP, phospholysine phosphohistidine inorganic pyrophos phosphatase; hydrolase; 1.92A {Homo sapiens} | Back alignment and structure |
|---|
Probab=89.07 E-value=1.8 Score=46.14 Aligned_cols=40 Identities=13% Similarity=0.055 Sum_probs=35.8
Q ss_pred CCchhHHHHHHHHhcCCcEEEEc---CCCHHHHHHHHHHcCCC
Q 001010 675 IREDSAKILSELKNSSQDLAMIT---GDQALTACYVASQVHIV 714 (1191)
Q Consensus 675 lK~da~~~I~~L~~agi~vvMiT---GDn~~TA~~VA~~~gI~ 714 (1191)
+-+.+.++++.+++.|++++.+| |..........+++|+.
T Consensus 33 ~~~~~~~a~~~l~~~G~~~~~~t~~~gr~~~~~~~~l~~~g~~ 75 (271)
T 2x4d_A 33 AIAGSVEAVARLKRSRLKVRFCTNESAASRAELVGQLQRLGFD 75 (271)
T ss_dssp ECTTHHHHHHHHHHSSSEEEEECCCCSSCHHHHHHHHHHTTCC
T ss_pred cCcCHHHHHHHHHHCCCcEEEEECCCCCCHHHHHHHHHHCCCC
Confidence 55788999999999999999999 99998888888888874
|
| >2b82_A APHA, class B acid phosphatase; DDDD acid phosphatase, metallo-ENZ hydrolase; HET: ADN; 1.25A {Escherichia coli} SCOP: c.108.1.12 PDB: 2b8j_A* 2hf7_A 1rmt_A* 1n9k_A 1rmq_A 1n8n_A* 1rmy_A* 2g1a_A* 3cz4_A 2heg_A* 1z5g_A 1z5u_A* 1z88_A 2aut_A | Back alignment and structure |
|---|
Probab=89.04 E-value=0.09 Score=55.61 Aligned_cols=28 Identities=11% Similarity=0.211 Sum_probs=25.0
Q ss_pred CCchhHHHHHHHHhcCCcEEEEcCCCHH
Q 001010 675 IREDSAKILSELKNSSQDLAMITGDQAL 702 (1191)
Q Consensus 675 lK~da~~~I~~L~~agi~vvMiTGDn~~ 702 (1191)
+++++.+.++.|++.|+++.++||-...
T Consensus 89 ~~~~~~e~l~~L~~~G~~l~ivTn~~~~ 116 (211)
T 2b82_A 89 PKEVARQLIDMHVRRGDAIFFVTGRSPT 116 (211)
T ss_dssp ECHHHHHHHHHHHHHTCEEEEEECSCCC
T ss_pred CcHHHHHHHHHHHHCCCEEEEEcCCcHH
Confidence 4678999999999999999999998754
|
| >4g9b_A Beta-PGM, beta-phosphoglucomutase; HAD, putative phosphoglucomutase, enzyme function initiative structural genomics, isomerase; 1.70A {Escherichia coli} | Back alignment and structure |
|---|
Probab=87.54 E-value=0.53 Score=50.36 Aligned_cols=40 Identities=8% Similarity=0.150 Sum_probs=32.6
Q ss_pred CcCCchhHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCC
Q 001010 673 CPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIV 714 (1191)
Q Consensus 673 d~lK~da~~~I~~L~~agi~vvMiTGDn~~TA~~VA~~~gI~ 714 (1191)
.++.|++.+.++.|++.|+++.++|+.. .+..+-+.+|+.
T Consensus 94 ~~~~pg~~~ll~~L~~~g~~i~i~t~~~--~~~~~l~~~gl~ 133 (243)
T 4g9b_A 94 NAVLPGIRSLLADLRAQQISVGLASVSL--NAPTILAALELR 133 (243)
T ss_dssp GGBCTTHHHHHHHHHHTTCEEEECCCCT--THHHHHHHTTCG
T ss_pred ccccccHHHHHHhhhcccccceeccccc--chhhhhhhhhhc
Confidence 3578999999999999999999999754 355566778874
|
| >1yv9_A Hydrolase, haloacid dehalogenase family; hypothetical protein, struc genomics, PSI, protein structure initiative; 2.80A {Enterococcus faecalis} SCOP: c.108.1.14 | Back alignment and structure |
|---|
Probab=87.22 E-value=0.87 Score=49.04 Aligned_cols=42 Identities=12% Similarity=0.143 Sum_probs=35.0
Q ss_pred CcCCchhHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHH----cCCC
Q 001010 673 CPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQ----VHIV 714 (1191)
Q Consensus 673 d~lK~da~~~I~~L~~agi~vvMiTGDn~~TA~~VA~~----~gI~ 714 (1191)
++.-+++.++++.|++.|+++.++||....+...++++ +|+.
T Consensus 20 ~~~~~~~~~~l~~l~~~g~~~~~~t~~~~~~~~~~~~~l~~~~g~~ 65 (264)
T 1yv9_A 20 KEPIPAGKRFVERLQEKDLPFLFVTNNTTKSPETVAQRLANEFDIH 65 (264)
T ss_dssp TEECHHHHHHHHHHHHTTCCEEEEECCCSSCHHHHHHHHHHHSCCC
T ss_pred CEECcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHhcCCC
Confidence 33347899999999999999999999998887777765 8875
|
| >3i28_A Epoxide hydrolase 2; aromatic hydrocarbons catabolism, detoxification, magnesium, metal-binding, peroxisome; HET: 34N; 1.95A {Homo sapiens} PDB: 1s8o_A* 1zd2_P* 1vj5_A* 1zd4_A* 1zd5_A* 3i1y_A* 1zd3_A* 3koo_A* 3otq_A* 4hai_A* 1cqz_A 1cr6_A* 1ek1_A* 1ek2_A* 3ans_A* 3ant_A* 3pdc_A* | Back alignment and structure |
|---|
Probab=82.90 E-value=1.6 Score=51.72 Aligned_cols=27 Identities=15% Similarity=0.110 Sum_probs=24.8
Q ss_pred CcCCchhHHHHHHHHhcCCcEEEEcCC
Q 001010 673 CPIREDSAKILSELKNSSQDLAMITGD 699 (1191)
Q Consensus 673 d~lK~da~~~I~~L~~agi~vvMiTGD 699 (1191)
.++.|++.++++.|++.|+++.++|+-
T Consensus 99 ~~~~~~~~~~L~~L~~~g~~~~i~Tn~ 125 (555)
T 3i28_A 99 RKINRPMLQAALMLRKKGFTTAILTNT 125 (555)
T ss_dssp CEECHHHHHHHHHHHHTTCEEEEEECC
T ss_pred cCcChhHHHHHHHHHHCCCEEEEEeCC
Confidence 367899999999999999999999985
|
| >2oyc_A PLP phosphatase, pyridoxal phosphate phosphatase; structural genomics, NYSGXRC, NEW YORK SGX research center for structural genomics, PSI-2; 1.72A {Homo sapiens} PDB: 2p27_A 2p69_A* 2cft_A* 2cfs_A 2cfr_A* | Back alignment and structure |
|---|
Probab=82.74 E-value=2.7 Score=46.42 Aligned_cols=43 Identities=5% Similarity=0.040 Sum_probs=34.9
Q ss_pred cCcCCchhHHHHHHHHhcCCcEEEEc---CCCHHHHHHHHHHcCCC
Q 001010 672 NCPIREDSAKILSELKNSSQDLAMIT---GDQALTACYVASQVHIV 714 (1191)
Q Consensus 672 ~d~lK~da~~~I~~L~~agi~vvMiT---GDn~~TA~~VA~~~gI~ 714 (1191)
.+++-+++.++|++|++.|++++++| |..........+++|+.
T Consensus 35 ~~~~~~~~~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~~~~~~g~~ 80 (306)
T 2oyc_A 35 GERAVPGAPELLERLARAGKAALFVSNNSRRARPELALRFARLGFG 80 (306)
T ss_dssp TTEECTTHHHHHHHHHHTTCEEEEEECCCSSCHHHHHHHHHHTTCC
T ss_pred CCccCcCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHhcCCC
Confidence 34556789999999999999999999 57676666667778874
|
| >2obb_A Hypothetical protein; structural genomics, PSI-2, PR structure initiative, midwest center for structural genomic unknown function; 2.20A {Bacteroides thetaiotaomicron} SCOP: c.108.1.25 | Back alignment and structure |
|---|
Probab=81.13 E-value=1.3 Score=43.82 Aligned_cols=40 Identities=10% Similarity=-0.060 Sum_probs=34.1
Q ss_pred CCchhHHHHHHHHhcCCcEEEEcCCC---HHHHHHHHHHcCCC
Q 001010 675 IREDSAKILSELKNSSQDLAMITGDQ---ALTACYVASQVHIV 714 (1191)
Q Consensus 675 lK~da~~~I~~L~~agi~vvMiTGDn---~~TA~~VA~~~gI~ 714 (1191)
+-|++.++|++|++.||+++++||.+ ...+....++.|+.
T Consensus 25 ~~~~~~~al~~l~~~G~~iii~TgR~~~~~~~~~~~l~~~gi~ 67 (142)
T 2obb_A 25 EIPFAVETLKLLQQEKHRLILWSVREGELLDEAIEWCRARGLE 67 (142)
T ss_dssp BCTTHHHHHHHHHHTTCEEEECCSCCHHHHHHHHHHHHTTTCC
T ss_pred cCHHHHHHHHHHHHCCCEEEEEeCCCcccHHHHHHHHHHcCCC
Confidence 34789999999999999999999998 55667778888874
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 1191 | ||||
| d1qyia_ | 380 | c.108.1.13 (A:) Hypothetical protein MW1667 (SA154 | 9e-16 | |
| d1q3ia_ | 214 | d.220.1.1 (A:) Sodium/potassium-transporting ATPas | 5e-15 | |
| d1wpga3 | 239 | d.220.1.1 (A:361-599) Calcium ATPase {Rabbit (Oryc | 8e-13 | |
| d1wpga2 | 168 | c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, ca | 1e-11 | |
| d1wpga1 | 115 | b.82.7.1 (A:125-239) Calcium ATPase, transduction | 7e-07 | |
| d2feaa1 | 226 | c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthio | 0.004 |
| >d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]} Length = 380 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Hypothetical protein MW1667 (SA1546) domain: Hypothetical protein MW1667 (SA1546) species: Staphylococcus aureus [TaxId: 1280]
Score = 78.3 bits (192), Expect = 9e-16
Identities = 29/350 (8%), Positives = 82/350 (23%), Gaps = 61/350 (17%)
Query: 488 CFDKTGTLTSDDMEFRGVVGLSNAELEDDMTK---VPVRTQEILASCHALVFVDNKLVGD 544
++ D+ R + + L + I+ S H + K +
Sbjct: 43 DWETLTDNDIQDI--RNRIFQKDKILNKLKSLGLNSNWDMLFIVFSIH--LIDILKKLSH 98
Query: 545 PLEKAALKGI---DWSYKSDEKAMPKRGGGNAVQIVQRHHFASHLKRMSVVVRVQEEFFA 601
+A + + ++ + + L+ + V + +A
Sbjct: 99 DEIEAFMYQDEPVELKLQNISTNLAD---------CFNLNEQLPLQFLDNVKVGKNNIYA 149
Query: 602 FVKGAPETIQDRLTDLPSSYIETYKKYTHQGSRVLALAFKSLPDMTVSDARSLHRDEVEN 661
++ T S + + L K D+ ++
Sbjct: 150 ALEEFATTELHVSDATLFSLKGALWTLAQEVYQEWYLGSKLYEDVE---------KKIAR 200
Query: 662 GLTFAGFAVFNCPI--REDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVL 719
G+ + ++ +L++LK + +L + TG
Sbjct: 201 TTFKTGYIYQEIILRPVDEVKVLLNDLKGAGFELGIATGRPYTETVVPFEN--------- 251
Query: 720 ILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLTDAHDLCIGGDCFEMLQQTSAVLRVIPY 779
L + + + + + + + L +
Sbjct: 252 -LGLLPYFEADFIATASDVLEAENMYPQARPLGKPNPF------------------SYIA 292
Query: 780 VKVFARVAPEQKELILTTFKAVGRMTLMCGDGTNDVGALKQAH---VGVA 826
+ + + GD D+ + ++ +G
Sbjct: 293 ALYGNNRDKYESYINKQDNIVNKDDVFIVGDSLADLLSAQKIGATFIGTL 342
|
| >d1q3ia_ d.220.1.1 (A:) Sodium/potassium-transporting ATPase alpha chain {Pig (Sus scrofa) [TaxId: 9823]} Length = 214 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Sodium/potassium-transporting ATPase alpha chain species: Pig (Sus scrofa) [TaxId: 9823]
Score = 73.0 bits (178), Expect = 5e-15
Identities = 32/158 (20%), Positives = 44/158 (27%), Gaps = 25/158 (15%)
Query: 540 KLVGDPLEKAALKGIDWSYKSDEKAMPKRGGGNAVQIVQRHHFASHLKRMSVVVRVQ--- 596
GD E A LK S R + V F S K + +
Sbjct: 62 DTAGDASESALLK---CIELSCGSVRKMR---DRNPKVAEISFNSTNKYQLSIHEREDNP 115
Query: 597 EEFFAFVKGAPETIQDRLT-------------DLPSSYIETYKKYTHQGSRVLALAFKSL 643
+ +KGAPE I DR + ++ ++ Y + G RVL +L
Sbjct: 116 QSHVLVMKGAPERILDRCSSILVQGKEIPLDKEMQDAFQNAYLELGGLGERVLGFCQLNL 175
Query: 644 PDMTVSDARSLHRDE---VENGLTFAGFAVFNCPIRED 678
P DE L F G
Sbjct: 176 PSGKFPRGFKFDTDELNFPTEKLCFVGLMSMIDHHHHH 213
|
| >d1wpga3 d.220.1.1 (A:361-599) Calcium ATPase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 239 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Calcium ATPase species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 67.2 bits (163), Expect = 8e-13
Identities = 45/231 (19%), Positives = 63/231 (27%), Gaps = 48/231 (20%)
Query: 486 MCCFDKTGTLTSDDMEFR---------GVVGLSNAELEDDMTKVPVRTQEILASCHALVF 536
M DK EF G V ++ + V I A C+
Sbjct: 6 MFIIDKVDGDFCSLNEFSITGSTYAPEGEVLKNDKPIRSGQFDGLVELATICALCNDSSL 65
Query: 537 VDNKLVGD------PLEKAALK-----GIDWSYKSDEKAMPKRGGGNAV-----QIVQRH 580
N+ G E A + + + + + N+V +
Sbjct: 66 DFNETKGVYEKVGEATETALTTLVEKMNVFNTEVRNLSKVERANACNSVIRQLMKKEFTL 125
Query: 581 HFASHLKRMSVVVRVQEE------FFAFVKGAPETIQDRLT---------DLPSSYIETY 625
F+ K MSV + FVKGAPE + DR + E
Sbjct: 126 EFSRDRKSMSVYCSPAKSSRAAVGNKMFVKGAPEGVIDRCNYVRVGTTRVPMTGPVKEKI 185
Query: 626 KK------YTHQGSRVLALAFKSLPDM--TVSDARSLHRDEVENGLTFAGF 668
R LALA + P + S E E LTF G
Sbjct: 186 LSVIKEWGTGRDTLRCLALATRDTPPKREEMVLDDSSRFMEYETDLTFVGV 236
|
| >d1wpga2 c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, catalytic domain P {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 168 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Calcium ATPase, catalytic domain P species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 62.1 bits (150), Expect = 1e-11
Identities = 32/154 (20%), Positives = 57/154 (37%), Gaps = 35/154 (22%)
Query: 674 PIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLILCPVKNGKVYEWV 733
P R++ + +++ + MITGD TA + ++ I + + G+ ++ +
Sbjct: 20 PPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAICRRIGIFGENEEVADRAYTGREFDDL 79
Query: 734 SPDETEKIQYSEKEVEGLTDAHDLCIGGDCFEMLQQTSAVLRVIPYVKVFARVAPEQKEL 793
E + FARV P K
Sbjct: 80 PLAEQREACR-----------------------------------RACCFARVEPSHKSK 104
Query: 794 ILTTFKAVGRMTLMCGDGTNDVGALKQAHVGVAL 827
I+ ++ +T M GDG ND ALK+A +G+A+
Sbjct: 105 IVEYLQSYDEITAMTGDGVNDAPALKKAEIGIAM 138
|
| >d1wpga1 b.82.7.1 (A:125-239) Calcium ATPase, transduction domain A {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 115 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Double-stranded beta-helix superfamily: Calcium ATPase, transduction domain A family: Calcium ATPase, transduction domain A domain: Calcium ATPase, transduction domain A species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 47.0 bits (111), Expect = 7e-07
Identities = 38/138 (27%), Positives = 61/138 (44%), Gaps = 28/138 (20%)
Query: 255 QTIMVHRCGKWV--KLAGTDLVPGDVVSIGRSSGQTGEDKSVPADMLILGG---SAIVNE 309
+ V+R + ++ D+VPGD+V + G+ VPAD+ IL + V++
Sbjct: 1 EMGKVYRADRKSVQRIKARDIVPGDIVEV-----AVGD--KVPADIRILSIKSTTLRVDQ 53
Query: 310 AILTGESTPQWKVSIMGRETGEKLSARRDKSHVLFGGTKILQHTPDKTFPLKTPDGGCLA 369
+ILTGES K + + + +DK ++LF GT I G L
Sbjct: 54 SILTGESVSVIKHT---EPVPDPRAVNQDKKNMLFSGTNIAA-------------GKALG 97
Query: 370 VVLRTGFETSQGKLMRTI 387
+V TG T GK+ +
Sbjct: 98 IVATTGVSTEIGKIRDQM 115
|
| >d2feaa1 c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX {Bacillus subtilis [TaxId: 1423]} Length = 226 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: MtnX-like domain: 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX species: Bacillus subtilis [TaxId: 1423]
Score = 38.0 bits (87), Expect = 0.004
Identities = 9/45 (20%), Positives = 16/45 (35%)
Query: 782 VFARVAPEQKELILTTFKAVGRMTLMCGDGTNDVGALKQAHVGVA 826
+ K ++ + +M GD DV A K + + A
Sbjct: 141 TCSNQCGCCKPSVIHELSEPNQYIIMIGDSVTDVEAAKLSDLCFA 185
|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 1191 | |||
| d1wpga2 | 168 | Calcium ATPase, catalytic domain P {Rabbit (Orycto | 99.96 | |
| d2b8ea1 | 135 | Cation-transporting ATPase {Archaeon Archaeoglobus | 99.9 | |
| d1wpga1 | 115 | Calcium ATPase, transduction domain A {Rabbit (Ory | 99.89 | |
| d1qyia_ | 380 | Hypothetical protein MW1667 (SA1546) {Staphylococc | 99.87 | |
| d1wpga4 | 472 | Calcium ATPase, transmembrane domain M {Rabbit (Or | 99.8 | |
| d1q3ia_ | 214 | Sodium/potassium-transporting ATPase alpha chain { | 99.8 | |
| d1wpga3 | 239 | Calcium ATPase {Rabbit (Oryctolagus cuniculus) [Ta | 99.67 | |
| d1rkqa_ | 271 | Hypothetical protein YidA {Escherichia coli [TaxId | 98.66 | |
| d1wr8a_ | 230 | Phosphoglycolate phosphatase, PGPase {Pyrococcus h | 98.6 | |
| d1nnla_ | 217 | Phosphoserine phosphatase {Human (Homo sapiens) [T | 98.58 | |
| d2feaa1 | 226 | 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate | 98.48 | |
| d1rkua_ | 206 | Homoserine kinase ThrH {Pseudomonas aeruginosa [Ta | 98.44 | |
| d1nrwa_ | 285 | Hypothetical protein YwpJ {Bacillus subtilis [TaxI | 98.43 | |
| d1rlma_ | 269 | Sugar phosphatase SupH (YbiV) {Escherichia coli [T | 98.42 | |
| d1l6ra_ | 225 | Phosphoglycolate phosphatase, PGPase {Archaeon The | 98.42 | |
| d1k1ea_ | 177 | Probable phosphatase YrbI {Haemophilus influenzae, | 98.37 | |
| d1wzca1 | 243 | Putative mannosyl-3-phosphoglycerate phosphatase M | 98.37 | |
| d2b30a1 | 283 | PFL1270w orthologue {Plasmodium vivax [TaxId: 5855 | 98.29 | |
| d2rbka1 | 260 | Sugar-phosphate phosphatase BT4131 {Bacteroides th | 98.23 | |
| d1nf2a_ | 267 | Hypothetical protein TM0651 {Thermotoga maritima [ | 98.18 | |
| d1j97a_ | 210 | Phosphoserine phosphatase {Archaeon Methanococcus | 98.12 | |
| d1xvia_ | 232 | Putative mannosyl-3-phosphoglycerate phosphatase M | 98.0 | |
| d1s2oa1 | 244 | Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc | 97.67 | |
| d1te2a_ | 218 | Phosphatase YniC {Escherichia coli [TaxId: 562]} | 96.62 | |
| d1u02a_ | 229 | Trehalose-6-phosphate phosphatase related protein | 96.5 | |
| d2hcfa1 | 228 | Hypothetical protein CT1708 {Chlorobium tepidum [T | 96.4 | |
| d2bdua1 | 291 | Cytosolic 5'-nucleotidase III {Mouse (Mus musculus | 96.36 | |
| d2hsza1 | 224 | Phosphoglycolate phosphatase Gph {Haemophilus somn | 96.33 | |
| d2a29a1 | 136 | Potassium-transporting ATPase B chain, KdpB {Esche | 96.21 | |
| d2fuea1 | 244 | Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: | 95.98 | |
| d2go7a1 | 204 | Hypothetical protein SP2064 {Streptococcus pneumon | 95.93 | |
| d1u7pa_ | 164 | Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mu | 94.96 | |
| d2ah5a1 | 210 | predicted phosphatase SP0104 {Streptococcus pneumo | 94.26 | |
| d2hdoa1 | 207 | Phosphoglycolate phosphatase {Lactobacillus planta | 94.16 | |
| d1zs9a1 | 253 | E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]} | 94.06 | |
| d1swva_ | 257 | Phosphonoacetaldehyde hydrolase {Bacillus cereus [ | 94.0 | |
| d2fi1a1 | 187 | Putative hydrolase SP0805 {Streptococcus pneumonia | 92.73 | |
| d1ltqa1 | 149 | Polynucleotide kinase, phosphatase domain {Bacteri | 92.63 | |
| d1x42a1 | 230 | Hypothetical protein PH0459 {Archaeon Pyrococcus h | 92.1 | |
| d2gfha1 | 247 | N-acylneuraminate-9-phosphatase NANP {Mouse (Mus m | 89.32 | |
| d1o08a_ | 221 | beta-Phosphoglucomutase {Lactococcus lactis [TaxId | 88.9 | |
| d1yv9a1 | 253 | Putative hydrolase EF1188 {Enterococcus faecalis [ | 87.66 | |
| d2gmwa1 | 182 | D,D-heptose 1,7-bisphosphate phosphatase GmhB {Esc | 87.21 | |
| d2b82a1 | 209 | Class B acid phosphatase, AphA {Escherichia coli [ | 85.86 | |
| d2o2xa1 | 209 | Hypothetical protein Mll2559 {Mesorhizobium loti [ | 85.23 | |
| d1zrna_ | 220 | L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., s | 85.2 | |
| d1cr6a1 | 222 | Epoxide hydrolase, N-terminal domain {Mouse (Mus m | 83.92 | |
| d2b8ea2 | 113 | Cation-transporting ATPase {Archaeon Archaeoglobus | 81.82 | |
| d1zd3a1 | 225 | Epoxide hydrolase, N-terminal domain {Human (Homo | 80.81 |
| >d1wpga2 c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, catalytic domain P {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Calcium ATPase, catalytic domain P species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=99.96 E-value=4.2e-30 Score=263.36 Aligned_cols=139 Identities=26% Similarity=0.318 Sum_probs=116.3
Q ss_pred cCcCCchhHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCcEEEeecCCCceeeecCCCccccccCChHHHhcc
Q 001010 672 NCPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGL 751 (1191)
Q Consensus 672 ~d~lK~da~~~I~~L~~agi~vvMiTGDn~~TA~~VA~~~gI~~~~~~il~~~~~~~~~~w~~~d~~~~~~~~~~~~~~~ 751 (1191)
-||+|+|++++|+.||++||+|+|+||||+.||.+||+++||...+..
T Consensus 18 ~Dp~R~~~~~~I~~l~~~GI~v~miTGD~~~tA~~ia~~~Gi~~~~~~-------------------------------- 65 (168)
T d1wpga2 18 LDPPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAICRRIGIFGENEE-------------------------------- 65 (168)
T ss_dssp ECCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTSSCTTCC--------------------------------
T ss_pred cCCCchhHHHHHHHHHHCcCEEEEECCCCHHHHHHHHHHcCCCCCccc--------------------------------
Confidence 399999999999999999999999999999999999999999843211
Q ss_pred cccceEEEechhhhhhcchHHHHhhcCcceEEeecChhhHHHHHHHHhHcCCEEEEEcCCccCHHHHhhCCceEEeccCC
Q 001010 752 TDAHDLCIGGDCFEMLQQTSAVLRVIPYVKVFARVAPEQKELILTTFKAVGRMTLMCGDGTNDVGALKQAHVGVALLNAV 831 (1191)
Q Consensus 752 ~~~~~l~itG~~l~~l~~~~~~~~~l~~~~VfAR~sP~qK~~iV~~Lq~~g~~V~m~GDG~ND~~ALk~AdVGIAl~~~~ 831 (1191)
-.+..++|..++.+.. .++.+.+++..||||++|+||..+|+.||+.|++|+|||||+||++|||+||||||++ ++
T Consensus 66 --v~~~~~~~~~~~~~~~-~~~~~~~~~~~v~ar~~p~~K~~lv~~l~~~g~~Va~vGDG~nD~~AL~~AdvGIa~~-~g 141 (168)
T d1wpga2 66 --VADRAYTGREFDDLPL-AEQREACRRACCFARVEPSHKSKIVEYLQSYDEITAMTGDGVNDAPALKKAEIGIAMG-SG 141 (168)
T ss_dssp --CTTTEEEHHHHHHSCH-HHHHHHHHHCCEEESCCHHHHHHHHHHHHHTTCCEEEEECSGGGHHHHHHSSEEEEET-TS
T ss_pred --cccccccccccchhhH-HHHhhhhhhhhhhhccchhHHHHHHHHHHhcccceeEEecCCCCHHHHHhCCEEEEec-cc
Confidence 1123567777765544 4556677788999999999999999999999999999999999999999999999998 45
Q ss_pred CccccccCCcccccc
Q 001010 832 PPTQSGNSSSEASKD 846 (1191)
Q Consensus 832 ~e~~~~asdi~~~~~ 846 (1191)
++.+++++|++++++
T Consensus 142 t~~a~~aAdivl~~~ 156 (168)
T d1wpga2 142 TAVAKTASEMVLADD 156 (168)
T ss_dssp CHHHHHTCSEEETTC
T ss_pred cHHHHHhCCEEEccC
Confidence 555666666666554
|
| >d2b8ea1 c.108.1.7 (A:416-434,A:548-663) Cation-transporting ATPase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Cation-transporting ATPase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=99.90 E-value=1.6e-24 Score=213.11 Aligned_cols=120 Identities=25% Similarity=0.265 Sum_probs=102.3
Q ss_pred EEeeeecccCcCCchhHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCcEEEeecCCCceeeecCCCccccccC
Q 001010 664 TFAGFAVFNCPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQY 743 (1191)
Q Consensus 664 ~flG~l~~~d~lK~da~~~I~~L~~agi~vvMiTGDn~~TA~~VA~~~gI~~~~~~il~~~~~~~~~~w~~~d~~~~~~~ 743 (1191)
+-.+.++++|++|+|++++|+.|+++|++++|+|||+..||.++|++|||.
T Consensus 11 ~~~~~~g~~D~lr~~a~~~I~~L~~~Gi~v~ilTGD~~~~a~~ia~~lgI~----------------------------- 61 (135)
T d2b8ea1 11 TGTLTKGKPDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLD----------------------------- 61 (135)
T ss_dssp CCCCBCSCCCCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCS-----------------------------
T ss_pred ceEEEEecCCCCCccHHHHHHHHHHcCCEEEEEcCcchhhhhHHHhhhhhh-----------------------------
Confidence 345578899999999999999999999999999999999999999999983
Q ss_pred ChHHHhcccccceEEEechhhhhhcchHHHHhhcCcceEEeecChhhHHHHHHHHhHcCCEEEEEcCCccCHHHHhhCCc
Q 001010 744 SEKEVEGLTDAHDLCIGGDCFEMLQQTSAVLRVIPYVKVFARVAPEQKELILTTFKAVGRMTLMCGDGTNDVGALKQAHV 823 (1191)
Q Consensus 744 ~~~~~~~~~~~~~l~itG~~l~~l~~~~~~~~~l~~~~VfAR~sP~qK~~iV~~Lq~~g~~V~m~GDG~ND~~ALk~AdV 823 (1191)
.+|++++|++|..+|+.+|+. ++|+|+|||.||++||++|||
T Consensus 62 -------------------------------------~v~~~~~p~~k~~~v~~~q~~-~~v~~vGDg~nD~~aL~~Adv 103 (135)
T d2b8ea1 62 -------------------------------------LVIAEVLPHQKSEEVKKLQAK-EVVAFVGDGINDAPALAQADL 103 (135)
T ss_dssp -------------------------------------EEECSCCHHHHHHHHHHHTTT-SCEEEEECSSSSHHHHHHSSE
T ss_pred -------------------------------------hhccccchhHHHHHHHHHHcC-CEEEEEeCCCCcHHHHHhCCe
Confidence 399999999999999999874 699999999999999999999
Q ss_pred eEEeccCCCccccccCCcccccccchhh
Q 001010 824 GVALLNAVPPTQSGNSSSEASKDENTKS 851 (1191)
Q Consensus 824 GIAl~~~~~e~~~~asdi~~~~~~~~~~ 851 (1191)
||||++ +++..++++|+++.+++..+.
T Consensus 104 gia~~~-~~~~~~~aADivl~~~~l~~i 130 (135)
T d2b8ea1 104 GIAVGS-GSDVAVESGDIVLIRDDLRDV 130 (135)
T ss_dssp EEEECC-C--------SEEESSCCTHHH
T ss_pred eeecCc-cCHHHHHhCCEEEECCCHHHH
Confidence 999995 567899999999998876543
|
| >d1wpga1 b.82.7.1 (A:125-239) Calcium ATPase, transduction domain A {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Double-stranded beta-helix superfamily: Calcium ATPase, transduction domain A family: Calcium ATPase, transduction domain A domain: Calcium ATPase, transduction domain A species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=99.89 E-value=4.3e-24 Score=203.25 Aligned_cols=109 Identities=34% Similarity=0.498 Sum_probs=93.4
Q ss_pred eEEEEECCEE--EEEecCCCCCCcEEEEcCCCCCCCCCceeeeeEEEEec---ceeeecccccCCCCceecccccCCCCc
Q 001010 256 TIMVHRCGKW--VKLAGTDLVPGDVVSIGRSSGQTGEDKSVPADMLILGG---SAIVNEAILTGESTPQWKVSIMGRETG 330 (1191)
Q Consensus 256 ~v~V~R~g~~--~~I~s~eLvpGDIV~l~~g~gd~~~~~~VPaD~iLl~G---~~~VdES~LTGES~Pv~K~~i~~~~~~ 330 (1191)
.++|+|+|++ ++|+++||+|||+|.|++| ++|||||+|++| ++.||||+|||||.|+.|.+.+.....
T Consensus 2 ~~kV~R~g~~~v~~I~~~eLv~GDiv~l~~G-------~~vPaD~~ll~~~~~~l~vdes~lTGEs~pv~K~~~~~~~~~ 74 (115)
T d1wpga1 2 MGKVYRADRKSVQRIKARDIVPGDIVEVAVG-------DKVPADIRILSIKSTTLRVDQSILTGESVSVIKHTEPVPDPR 74 (115)
T ss_dssp EEEEEBSSCSSCEEEEGGGCCTTCEEEEETT-------CBCCSEEEEEEECSSCCEEECHHHHSCCSCEECCCSCCCCTT
T ss_pred ceEEEECCCceEEEEeHHHCCCCCEEEECCC-------CEEeeceEEEEeeccceEEEEeecccceEEEEeecccccccc
Confidence 5789999985 7899999999999999987 899999999853 578999999999999999875432222
Q ss_pred cccccccCCCeeEeeceEEeecCCCCCCCCCCCCCcEEEEEEEecccchhhHHHHHh
Q 001010 331 EKLSARRDKSHVLFGGTKILQHTPDKTFPLKTPDGGCLAVVLRTGFETSQGKLMRTI 387 (1191)
Q Consensus 331 ~~~~~~~~k~~~lfaGT~vlq~~~~~~~~~~~~~g~~~~vV~~TG~~T~~Gkl~r~i 387 (1191)
....++.|++|+||.|. +|.+.++|++||++|.+|++.+++
T Consensus 75 ---~~~~~~~n~lf~GT~V~-------------~G~~~~~V~~tG~~T~~G~i~~~i 115 (115)
T d1wpga1 75 ---AVNQDKKNMLFSGTNIA-------------AGKALGIVATTGVSTEIGKIRDQM 115 (115)
T ss_dssp ---CCGGGCTTEECTTCEEE-------------ECEEEEEEEECGGGSHHHHHHHHH
T ss_pred ---cccccccceEEeccEEE-------------eeeEEEEEEEEccccHHHHHHHhC
Confidence 12235789999999999 799999999999999999998864
|
| >d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Hypothetical protein MW1667 (SA1546) domain: Hypothetical protein MW1667 (SA1546) species: Staphylococcus aureus [TaxId: 1280]
Probab=99.87 E-value=6.1e-27 Score=271.92 Aligned_cols=315 Identities=10% Similarity=-0.042 Sum_probs=205.9
Q ss_pred cccccCCccEEEecccccccCCceEEEEEeecCC-CccccccCCCchHHHHHHhhccceEEeCCcccCChHHHHHHhccc
Q 001010 477 RIPFAGKVDMCCFDKTGTLTSDDMEFRGVVGLSN-AELEDDMTKVPVRTQEILASCHALVFVDNKLVGDPLEKAALKGID 555 (1191)
Q Consensus 477 ~i~~~G~vd~icfDKTGTLT~~~l~v~gv~~~~~-~~~~~~~~~~~~~~~~~la~chsl~~~~~~~~GdPle~all~~~~ 555 (1191)
+.+++|...++|+|||||+|.++|.+..+..... ..+..-.-....+...+.++||..... +..|+|.+.+++....
T Consensus 32 s~e~Lg~~~~i~~~k~~~~t~~~i~~~~~~~~~il~~~k~~g~n~~~dl~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~ 109 (380)
T d1qyia_ 32 DKCYLGLHSHIDWETLTDNDIQDIRNRIFQKDKILNKLKSLGLNSNWDMLFIVFSIHLIDIL--KKLSHDEIEAFMYQDE 109 (380)
T ss_dssp CTTTTCCSCCCCGGGCCHHHHHHHHHHHHTTTHHHHHHHHTTCCCHHHHHHHHHHHHHHHHH--TTSCHHHHHHHHHCSS
T ss_pred chhhcccceeeecCcccchhhhhheeeeecchhhhHhhhhcCCChhHHHHHHHHHHHHHHHH--hhcCCCcHHHHHHHHh
Confidence 4588999999999999999999987644321100 000000001123445556667754322 2357888888876542
Q ss_pred ccccCCCccccCCCCCCcccEEEEecCCCCCCcEEEEEEeCC-eEEEEEeCcHHHHHHhccCChHHHHHHHHHHHHhcCe
Q 001010 556 WSYKSDEKAMPKRGGGNAVQIVQRHHFASHLKRMSVVVRVQE-EFFAFVKGAPETIQDRLTDLPSSYIETYKKYTHQGSR 634 (1191)
Q Consensus 556 ~~~~~~~~~~~~~~~~~~~~il~~~~Fss~~krmsvvv~~~~-~~~~~~KGapE~I~~~~~~~p~~~~~~~~~~a~~G~R 634 (1191)
..-.... .....+....+.||+|.+|+|+++....+ .+..+.||++|.+. ........+...+..++++|+|
T Consensus 110 ~~~~~~~------~~~~~~~~~~~i~f~~~~k~~~~~~~~~~~~~~~~~~~a~~~~~-~~~~~~~~~~~~~~~~a~~~~r 182 (380)
T d1qyia_ 110 PVELKLQ------NISTNLADCFNLNEQLPLQFLDNVKVGKNNIYAALEEFATTELH-VSDATLFSLKGALWTLAQEVYQ 182 (380)
T ss_dssp CHHHHHT------TSGGGCSSCCCCCTTTTHHHHTTCCSSHHHHHHHHHHHHHHHTT-CSCCGGGSTTCHHHHHHHHHHH
T ss_pred hccchHH------HHHHhccccccCCcchHHHHHhhhcccccchhHhhhhccHhhcC-CcHHHHHHHHhHHHHHHHHHHH
Confidence 1100000 01122334556799999999987654433 23344566766553 2222234456677899999999
Q ss_pred eeeEEEEeCCCCChhhhhhccccccccCeEEeeeecccCcCCc--hhHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcC
Q 001010 635 VLALAFKSLPDMTVSDARSLHRDEVENGLTFAGFAVFNCPIRE--DSAKILSELKNSSQDLAMITGDQALTACYVASQVH 712 (1191)
Q Consensus 635 VLalA~k~l~~~~~~~~~~~~r~~~E~dL~flG~l~~~d~lK~--da~~~I~~L~~agi~vvMiTGDn~~TA~~VA~~~g 712 (1191)
++++|++..+.. ......+....|++..++++|| +++++|+.|+++|++++|+|||+..+|..+++++|
T Consensus 183 ~l~~~~~~~~~~---------~~~~~~~~~~~g~i~~~~~i~p~~~v~~~l~~lk~aGi~v~i~Tg~~~~~a~~il~~lg 253 (380)
T d1qyia_ 183 EWYLGSKLYEDV---------EKKIARTTFKTGYIYQEIILRPVDEVKVLLNDLKGAGFELGIATGRPYTETVVPFENLG 253 (380)
T ss_dssp HHHHHHHHHHHH---------HCSCCSCSSCCCTTTTCCBSSCHHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHT
T ss_pred HHHHhhhccccc---------ccccchhhHhcccccccccccchhhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcC
Confidence 999998755210 1112234556799999999766 99999999999999999999999999999999999
Q ss_pred CCCCCcEEEeecCCCceeeecCCCccccccCChHHHhcccccceEEEechhhhhhcch--------HHHHhhcCcceEEe
Q 001010 713 IVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLTDAHDLCIGGDCFEMLQQT--------SAVLRVIPYVKVFA 784 (1191)
Q Consensus 713 I~~~~~~il~~~~~~~~~~w~~~d~~~~~~~~~~~~~~~~~~~~l~itG~~l~~l~~~--------~~~~~~l~~~~VfA 784 (1191)
|.+.- +...+++|+........ +--...+....+++
T Consensus 254 l~~~F------------------------------------~~~~i~~~~d~~~~~~~~~~~~~~~KP~p~~~~~~~~~~ 297 (380)
T d1qyia_ 254 LLPYF------------------------------------EADFIATASDVLEAENMYPQARPLGKPNPFSYIAALYGN 297 (380)
T ss_dssp CGGGS------------------------------------CGGGEECHHHHHHHHHHSTTSCCCCTTSTHHHHHHHHCC
T ss_pred CcccC------------------------------------CcceEEecchhhhhhhhccccccccCCChHHHHHHHHHc
Confidence 96310 00112222221110000 00001122335789
Q ss_pred ecChhhHHHHHHHHhHcCCEEEEEcCCccCHHHHhhCC---ceEEeccCCCccccc----cCCccccc
Q 001010 785 RVAPEQKELILTTFKAVGRMTLMCGDGTNDVGALKQAH---VGVALLNAVPPTQSG----NSSSEASK 845 (1191)
Q Consensus 785 R~sP~qK~~iV~~Lq~~g~~V~m~GDG~ND~~ALk~Ad---VGIAl~~~~~e~~~~----asdi~~~~ 845 (1191)
|.+|+||..+++.++..+..|+|+|||.||++|+|+|| |||+||.++++..++ ++|+++.+
T Consensus 298 ~~~~~~k~~iv~~~~~~~~~~~~vGD~~~D~~aak~Ag~~~Igv~~G~~g~~~~~el~~~~AD~ii~~ 365 (380)
T d1qyia_ 298 NRDKYESYINKQDNIVNKDDVFIVGDSLADLLSAQKIGATFIGTLTGLKGKDAAGELEAHHADYVINH 365 (380)
T ss_dssp CGGGHHHHHHCCTTCSCTTTEEEEESSHHHHHHHHHHTCEEEEESCBTTBGGGHHHHHHTTCSEEESS
T ss_pred CCCHHHHHHHHHHhCCCCCeEEEECCCHHHHHHHHHCCCCEEEEecCCCCcccHHHHHhCCCCEEECC
Confidence 99999999999999999999999999999999999999 999999877765443 67777743
|
| >d1wpga4 f.33.1.1 (A:1-124,A:240-343,A:751-994) Calcium ATPase, transmembrane domain M {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Membrane and cell surface proteins and peptides fold: Calcium ATPase, transmembrane domain M superfamily: Calcium ATPase, transmembrane domain M family: Calcium ATPase, transmembrane domain M domain: Calcium ATPase, transmembrane domain M species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=99.80 E-value=5.7e-20 Score=218.76 Aligned_cols=221 Identities=11% Similarity=0.150 Sum_probs=150.0
Q ss_pred CChhhhHHhhhhcC-CCCCHHHHHHHHhccCCCccCCCC-CcHHHHHHHHhhhHHHHHHHHHHHHHhhhh----------
Q 001010 150 YPTKETFGYYLKCT-GHSTEAKIAVATEKWGRNVFEYPQ-PTFQKLMKENCMEPFFVFQVFCVGLWCLDE---------- 217 (1191)
Q Consensus 150 ~~~~~~~~~~~~~~-g~ls~~e~~~~~~~yG~N~i~i~~-~s~~~ll~~~~~~pf~vfqi~~v~lw~l~~---------- 217 (1191)
.+.++.++++.++. .|+|++|+++|+++||+|+++.++ +++|+++++++.+|+.++++++.++.+.-+
T Consensus 7 ~~~e~v~~~l~td~~~GLs~~ea~~r~~~~G~N~l~~~~~~s~~~~~~~~~~~~~~~iL~~aa~ls~~~~~~~~~~~~~~ 86 (472)
T d1wpga4 7 KSTEECLAYFGVSETTGLTPDQVKRHLEKYGHNELPAEEGKSLWELVIEQFEDLLVRILLLAACISFVLAWFEEGEETIT 86 (472)
T ss_dssp SCHHHHHHHHTCCTTTCBCHHHHHHHHHHSCCSSCCCCCCCCHHHHHHHHTCSHHHHHHHHHHHHHHHHHHTSCTTSTTS
T ss_pred CCHHHHHHHhCcCcccCcCHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcccccch
Confidence 34678899998874 678999999999999999998765 699999999999999988887766554322
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHhhccCCceEEEEECCEEEEEecCCCCCCcEEEEcCCCCCCCCCcee
Q 001010 218 YWYYSLFTLFMLFMFESTMAKSRLKT---LTEIRRVRVDNQTIMVHRCGKWVKLAGTDLVPGDVVSIGRSSGQTGEDKSV 294 (1191)
Q Consensus 218 y~~ysl~~l~m~vv~~~~~~~~~~r~---~~~l~~m~~~~~~v~V~R~g~~~~I~s~eLvpGDIV~l~~g~gd~~~~~~V 294 (1191)
.|+.++++++++++.......|..|+ ++.+++|... . ..| +++
T Consensus 87 ~~~~~~~I~~vv~~n~~i~~~qe~~a~~~~~~l~~~~~~--~-------------------------~~~-------~~~ 132 (472)
T d1wpga4 87 AFVEPFVILLILIANAIVGVWQERNAENAIEALKEYEPA--A-------------------------TEQ-------DKT 132 (472)
T ss_dssp SSHHHHHHHHHHHHHHHHHHHHHHSCCCHHHHHGGGSCC--C-------------------------CCC-------CCC
T ss_pred hHhHhhhhhheeeeeeeEEeEEechHHHHHHHHhhhccc--c-------------------------ccc-------cCc
Confidence 24556665555555444555666544 4444444221 0 112 577
Q ss_pred eeeEEEEecceeeecccccCCCCceecccccCCCCccccccccCCCeeEeeceEEeecCCCCCCCCCCCCCcEEEEEEEe
Q 001010 295 PADMLILGGSAIVNEAILTGESTPQWKVSIMGRETGEKLSARRDKSHVLFGGTKILQHTPDKTFPLKTPDGGCLAVVLRT 374 (1191)
Q Consensus 295 PaD~iLl~G~~~VdES~LTGES~Pv~K~~i~~~~~~~~~~~~~~k~~~lfaGT~vlq~~~~~~~~~~~~~g~~~~vV~~T 374 (1191)
|+|..|.+ +||+.+.. .++|..|
T Consensus 133 P~d~~l~~----------~g~~i~~~-----------------------------------------------~~~~~~~ 155 (472)
T d1wpga4 133 PLQQKLDE----------FGEQLSKV-----------------------------------------------ISLICVA 155 (472)
T ss_dssp HHHHHHHH----------HHHHHHHH-----------------------------------------------HHHHHHH
T ss_pred hHHHHHHH----------HHHHHHHH-----------------------------------------------HHHHHHH
Confidence 77765532 23332110 0112223
Q ss_pred cccchhhHHHHHhccccccccchhhhHHHHHHHHHHHHHHhhheeeeecccCCCcchhHHHHHHHHhhhhccCCCcchHH
Q 001010 375 GFETSQGKLMRTILFSTERVTANSWESGLFILFLVVFAVIAAGYVLKKGMEDPTRSKYKLFLSCSLIITSVIPPELPMEL 454 (1191)
Q Consensus 375 G~~T~~Gkl~r~i~~~~~~~~~~~~~~~~fi~~lli~aii~~~~~~~~~~~~~~~~~~~~~l~~i~iit~~vP~~LP~~l 454 (1191)
|+.|..|++...+ .+ .+..+.....+..++.++++++|++||+++
T Consensus 156 ~~~~~~~~~~~~~----------------------------------~~-~~~~~~~~~~~~~ai~l~V~~iPEgLp~~v 200 (472)
T d1wpga4 156 VWLINIGHFNDPV----------------------------------HG-GSWIRGAIYYFKIAVALAVAAIPEGLPAVI 200 (472)
T ss_dssp HHHHCCTTSSSCC----------------------------------SS-SCSSSCGGGHHHHHHHHHHHHSCTTHHHHH
T ss_pred HHHHHHHHHHHHH----------------------------------hh-hhhHHHHHHHHHHHHHHHHHhChhhHHHHH
Confidence 3333333321111 00 011233445677788899999999999999
Q ss_pred HHHHHHHHHHHHhcCccccCCCcccccCCccEEEeccc--cccc
Q 001010 455 SIAVNTSLIALARRGIFCTEPFRIPFAGKVDMCCFDKT--GTLT 496 (1191)
Q Consensus 455 slav~~s~~~L~k~~I~~~~p~~i~~~G~vd~icfDKT--GTLT 496 (1191)
+++++.+..||+|+++++|+..++|.+|+..+.|.||| +|||
T Consensus 201 ti~La~~~~rmak~~~lVr~L~avE~~g~~~~~~~~k~i~~~l~ 244 (472)
T d1wpga4 201 TTCLALGTRRMAKKNAIVRSLPSVETLGRAIYNNMKQFIRYLIS 244 (472)
T ss_dssp HHHHHHHHHHHHTTTEEESCTTHHHHHTHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhccchhhhHHHHHHHHHHHHHHhHHhhhhhhh
Confidence 99999999999999999999999999999999999998 4444
|
| >d1q3ia_ d.220.1.1 (A:) Sodium/potassium-transporting ATPase alpha chain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Sodium/potassium-transporting ATPase alpha chain species: Pig (Sus scrofa) [TaxId: 9823]
Probab=99.80 E-value=5.8e-20 Score=195.70 Aligned_cols=149 Identities=23% Similarity=0.270 Sum_probs=106.3
Q ss_pred HHHHHhhccceEEeCC---------cccCChHHHHHHhcccccccCCCccccCCCCCCcccEEEEecCCCCCCcEEEEEE
Q 001010 524 TQEILASCHALVFVDN---------KLVGDPLEKAALKGIDWSYKSDEKAMPKRGGGNAVQIVQRHHFASHLKRMSVVVR 594 (1191)
Q Consensus 524 ~~~~la~chsl~~~~~---------~~~GdPle~all~~~~~~~~~~~~~~~~~~~~~~~~il~~~~Fss~~krmsvvv~ 594 (1191)
...+.+.|++.....+ ..+|||.|.|++.++... ..+.. .....+.++..+||+|.+|||+++++
T Consensus 37 l~~~~~lcn~a~~~~~~~~~~~~~~~~~GdptE~ALl~~a~~~-~~~~~-----~~r~~~~~v~~~pF~S~rK~ms~v~~ 110 (214)
T d1q3ia_ 37 LSRIAGLCNRAVFKAGQENISVSKRDTAGDASESALLKCIELS-CGSVR-----KMRDRNPKVAEISFNSTNKYQLSIHE 110 (214)
T ss_dssp HHHHHHHSCCCCCC----------CCCCSCHHHHHHHHHHHHH-HSCHH-----HHHHTSCEEEEEC------CEEEEEE
T ss_pred HHHHHHHhCCCccccCCCCCcccccccccChHHHHHHHHHHHh-CCCHH-----HHHhhCcEeeeEeeCCCCCEEEEEEE
Confidence 4567788987764321 468999999999876421 11100 01134678999999999999999998
Q ss_pred eC---CeEEEEEeCcHHHHHHhccCC-------------hHHHHHHHHHHHHhcCeeeeEEEEeCCCCChhhhh---hcc
Q 001010 595 VQ---EEFFAFVKGAPETIQDRLTDL-------------PSSYIETYKKYTHQGSRVLALAFKSLPDMTVSDAR---SLH 655 (1191)
Q Consensus 595 ~~---~~~~~~~KGapE~I~~~~~~~-------------p~~~~~~~~~~a~~G~RVLalA~k~l~~~~~~~~~---~~~ 655 (1191)
.+ +++++|+|||||.|+++|..+ .+.+.+.+++|+++|+||||+|||+++........ ...
T Consensus 111 ~~~~~~~~~~~~KGApe~Il~~C~~~~~~g~~~~l~~~~~~~i~~~~~~~a~~GlRvLa~A~k~l~~~~~~~~~~~~~~~ 190 (214)
T d1q3ia_ 111 REDNPQSHVLVMKGAPERILDRCSSILVQGKEIPLDKEMQDAFQNAYLELGGLGERVLGFCQLNLPSGKFPRGFKFDTDE 190 (214)
T ss_dssp CSSCTTSEEEEEEECHHHHHHTEEEEEETTEEEECCHHHHHHHHHHHHHHHHTTCEEEEEEEEEECTTTSCTTCCCCTTT
T ss_pred ccCCCCceeEEecCCHHHHHHhhhheeeCCceeechHHHHHHHHHHHHHHhhCCcEEEEEEEEecCccccccccccChhh
Confidence 74 367899999999999999521 35677889999999999999999999754433222 223
Q ss_pred ccccccCeEEeeeecccCcCCch
Q 001010 656 RDEVENGLTFAGFAVFNCPIRED 678 (1191)
Q Consensus 656 r~~~E~dL~flG~l~~~d~lK~d 678 (1191)
.+..|+||+|+|+++++||+|++
T Consensus 191 ~~~~e~~L~flGlvgi~DPPR~~ 213 (214)
T d1q3ia_ 191 LNFPTEKLCFVGLMSMIDHHHHH 213 (214)
T ss_dssp TSSCCSSEEEEEEEEEESCCSCC
T ss_pred hhhhcCCCEEEEEEEEEeCCCCC
Confidence 45678999999999999999975
|
| >d1wpga3 d.220.1.1 (A:361-599) Calcium ATPase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Calcium ATPase species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=99.67 E-value=1.7e-17 Score=179.41 Aligned_cols=148 Identities=24% Similarity=0.227 Sum_probs=103.1
Q ss_pred HHHHHHhhccceEEe----CC--cccCChHHHHHHhcccccccCCCccccCC-----------CCCCcccEEEEecCCCC
Q 001010 523 RTQEILASCHALVFV----DN--KLVGDPLEKAALKGIDWSYKSDEKAMPKR-----------GGGNAVQIVQRHHFASH 585 (1191)
Q Consensus 523 ~~~~~la~chsl~~~----~~--~~~GdPle~all~~~~~~~~~~~~~~~~~-----------~~~~~~~il~~~~Fss~ 585 (1191)
....+++.||+.... ++ ...|||.|.|++.++.. ..-+....... .....+.+++.+||+|+
T Consensus 52 ~ll~~~~LCn~a~l~~~~~~~~~~~~G~pTE~ALl~~a~k-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~pF~S~ 130 (239)
T d1wpga3 52 ELATICALCNDSSLDFNETKGVYEKVGEATETALTTLVEK-MNVFNTEVRNLSKVERANACNSVIRQLMKKEFTLEFSRD 130 (239)
T ss_dssp HHHHHHHHSCSCEEEEETTTTEEEEESCHHHHHHHHHHHH-HCTTCCCCSSSCHHHHTTHHHHHHHHHEEEEEEEEEETT
T ss_pred HHHHHHHhcCCCEeeecCCCCeEEEcCCCCcHHHHHHHHH-hCCChHHhhccchhhhhccchhhhhhhCeEEEEeeeccc
Confidence 345678899987653 12 36799999999987631 11111000000 00235789999999999
Q ss_pred CCcEEEEEEeCC------eEEEEEeCcHHHHHHhccC---------C----hHHHHHHHHHH--HHhcCeeeeEEEEeCC
Q 001010 586 LKRMSVVVRVQE------EFFAFVKGAPETIQDRLTD---------L----PSSYIETYKKY--THQGSRVLALAFKSLP 644 (1191)
Q Consensus 586 ~krmsvvv~~~~------~~~~~~KGapE~I~~~~~~---------~----p~~~~~~~~~~--a~~G~RVLalA~k~l~ 644 (1191)
+|||||+++.++ .+.+|+|||||.|+++|.. + .+.+.+..+.+ +++|+||||+|||+++
T Consensus 131 rK~Msvv~~~~~~~~~~~~~~l~vKGApe~iL~~C~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~glRvLa~A~k~~~ 210 (239)
T d1wpga3 131 RKSMSVYCSPAKSSRAAVGNKMFVKGAPEGVIDRCNYVRVGTTRVPMTGPVKEKILSVIKEWGTGRDTLRCLALATRDTP 210 (239)
T ss_dssp TTEEEEEEEESSGGGGGGCSEEEEEECHHHHHHTEEEEEETTEEEECCHHHHHHHHHHHHHHTTSSCCCEEEEEEEESSC
T ss_pred ccEEEEEEEcCCCCcccceeEEEEeCChHHHHHhccceecCCceeeCCHHHHHHHHHHHHHHhHhhCCCEEEEEEEEECC
Confidence 999999999865 3689999999999999952 1 22344455554 6799999999999997
Q ss_pred CCChhhh--hhccccccccCeEEeeeecc
Q 001010 645 DMTVSDA--RSLHRDEVENGLTFAGFAVF 671 (1191)
Q Consensus 645 ~~~~~~~--~~~~r~~~E~dL~flG~l~~ 671 (1191)
....... ....++++|+||+|+|++++
T Consensus 211 ~~~~~~~~~~~~~~~~~E~~L~flGlvgi 239 (239)
T d1wpga3 211 PKREEMVLDDSSRFMEYETDLTFVGVVGM 239 (239)
T ss_dssp CCGGGCCTTCGGGHHHHTCSEEEEEEEEE
T ss_pred cccccccccchhhHHHhcCCCEEEEEECC
Confidence 5433221 12345788999999999985
|
| >d1rkqa_ c.108.1.10 (A:) Hypothetical protein YidA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YidA species: Escherichia coli [TaxId: 562]
Probab=98.66 E-value=3.6e-08 Score=106.23 Aligned_cols=50 Identities=8% Similarity=0.127 Sum_probs=43.1
Q ss_pred cCcCCchhHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCcEEE
Q 001010 672 NCPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLIL 721 (1191)
Q Consensus 672 ~d~lK~da~~~I~~L~~agi~vvMiTGDn~~TA~~VA~~~gI~~~~~~il 721 (1191)
+..+-+++.++|++|+++||+++++||.+...+..+.+++++......++
T Consensus 19 ~~~i~~~~~~al~~L~~~gi~v~i~TGR~~~~~~~~~~~l~l~~~~~~~i 68 (271)
T d1rkqa_ 19 DHTISPAVKNAIAAARARGVNVVLTTGRPYAGVHNYLKELHMEQPGDYCI 68 (271)
T ss_dssp TSCCCHHHHHHHHHHHHTTCEEEEECSSCGGGTHHHHHHTTCCSTTCEEE
T ss_pred CCccCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHhcCcCCCcEEE
Confidence 34577999999999999999999999999999999999999875444444
|
| >d1wr8a_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Pyrococcus horikoshii [TaxId: 53953]
Probab=98.60 E-value=3.1e-08 Score=103.51 Aligned_cols=162 Identities=15% Similarity=0.126 Sum_probs=91.9
Q ss_pred cCCchhHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCcEEEeecCCCceeeecCCCccccccCCh-----HHH
Q 001010 674 PIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSE-----KEV 748 (1191)
Q Consensus 674 ~lK~da~~~I~~L~~agi~vvMiTGDn~~TA~~VA~~~gI~~~~~~il~~~~~~~~~~w~~~d~~~~~~~~~-----~~~ 748 (1191)
.+.+.+.++|++|+++|++++++||++...+...++.+++.. ..+.. ++..+.+..... ....... .++
T Consensus 19 ~i~~~~~~~l~~l~~~gi~v~~~TGR~~~~~~~~~~~~~~~~--~~i~~---~g~~~~~~~~~~-~~~~~~~~~~~~~~~ 92 (230)
T d1wr8a_ 19 MIHEKALEAIRRAESLGIPIMLVTGNTVQFAEAASILIGTSG--PVVAE---DGGAISYKKKRI-FLASMDEEWILWNEI 92 (230)
T ss_dssp CBCHHHHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHHTCCS--CEEEG---GGTEEEETTEEE-ESCCCSHHHHHHHHH
T ss_pred ccCHHHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHhcCCCc--ccccc---cceeeecccccc-ccccccHHHHHHHHH
Confidence 577899999999999999999999999999999999998742 12211 011111100000 0000000 000
Q ss_pred h-----------cccccceEEEechh--hhhhcchHHHHhhcC--------cceEEeecChhhHHHHHHHHhHc----CC
Q 001010 749 E-----------GLTDAHDLCIGGDC--FEMLQQTSAVLRVIP--------YVKVFARVAPEQKELILTTFKAV----GR 803 (1191)
Q Consensus 749 ~-----------~~~~~~~l~itG~~--l~~l~~~~~~~~~l~--------~~~VfAR~sP~qK~~iV~~Lq~~----g~ 803 (1191)
. .......+.+.... .+.+ .++.+.+. ...+-.......|...++.+.+. ..
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~iei~~~~~~K~~al~~l~~~~~i~~~ 169 (230)
T d1wr8a_ 93 RKRFPNARTSYTMPDRRAGLVIMRETINVETV---REIINELNLNLVAVDSGFAIHVKKPWINKGSGIEKASEFLGIKPK 169 (230)
T ss_dssp HHHCTTCCBCTTGGGCSSCEEECTTTSCHHHH---HHHHHHTTCSCEEEECSSCEEEECTTCCHHHHHHHHHHHHTSCGG
T ss_pred HHhcccccceeecccceeeEEEecccccHHHH---HHHHHHhccceEEeeCCcEEEEeeCCcCcchhhcccccccccchh
Confidence 0 00011122222111 1111 11111111 11222233445788888876552 35
Q ss_pred EEEEEcCCccCHHHHhhCCceEEeccCCCccccccCCccccc
Q 001010 804 MTLMCGDGTNDVGALKQAHVGVALLNAVPPTQSGNSSSEASK 845 (1191)
Q Consensus 804 ~V~m~GDG~ND~~ALk~AdVGIAl~~~~~e~~~~asdi~~~~ 845 (1191)
.|+|+|||.||.+||+.|++||||+++.+++ +++++++...
T Consensus 170 ~~~~iGD~~NDi~ml~~ag~~vav~na~~~~-k~~A~~v~~~ 210 (230)
T d1wr8a_ 170 EVAHVGDGENDLDAFKVVGYKVAVAQAPKIL-KENADYVTKK 210 (230)
T ss_dssp GEEEEECSGGGHHHHHHSSEEEECTTSCHHH-HTTCSEECSS
T ss_pred heeeeecCccHHHHHHHCCeEEEECCCCHHH-HHhCCEEECC
Confidence 6999999999999999999999999887664 4555655533
|
| >d1nnla_ c.108.1.4 (A:) Phosphoserine phosphatase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.58 E-value=2e-08 Score=105.54 Aligned_cols=112 Identities=16% Similarity=0.220 Sum_probs=79.8
Q ss_pred cCCchhHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCcEEEeecCCCceeeecCCCccccccCChHHHhcccc
Q 001010 674 PIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLTD 753 (1191)
Q Consensus 674 ~lK~da~~~I~~L~~agi~vvMiTGDn~~TA~~VA~~~gI~~~~~~il~~~~~~~~~~w~~~d~~~~~~~~~~~~~~~~~ 753 (1191)
+++|++.++|+.|++.|++++++||.....+.++++.+||...+ ++-. .+.+
T Consensus 82 ~l~pg~~~~i~~lk~~G~~~~ivS~~~~~~v~~i~~~lgi~~~~-v~an------~~~~--------------------- 133 (217)
T d1nnla_ 82 HLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVASKLNIPATN-VFAN------RLKF--------------------- 133 (217)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCCGGG-EEEE------CEEE---------------------
T ss_pred ccCHHHHHHHHHHHhCCCEEEEECCCchHHHHHHHHHhCCcccc-eeee------eeee---------------------
Confidence 46899999999999999999999999999999999999995211 1110 0000
Q ss_pred cceEEEechhhhhhcchHHHHhhcCcceEEeecChhhHHHHHHHHhHc-C-CEEEEEcCCccCHHHHhhCCceEEeccC
Q 001010 754 AHDLCIGGDCFEMLQQTSAVLRVIPYVKVFARVAPEQKELILTTFKAV-G-RMTLMCGDGTNDVGALKQAHVGVALLNA 830 (1191)
Q Consensus 754 ~~~l~itG~~l~~l~~~~~~~~~l~~~~VfAR~sP~qK~~iV~~Lq~~-g-~~V~m~GDG~ND~~ALk~AdVGIAl~~~ 830 (1191)
..+|...... ...--..+..|..+++.+++. + ..+.|+|||.||.+|++.|++|||++..
T Consensus 134 ----~~~G~~~g~~-------------~~~p~~~~~~K~~~v~~~~~~~~~~~~~~vGDs~~Di~~~~~ag~~va~~~~ 195 (217)
T d1nnla_ 134 ----YFNGEYAGFD-------------ETQPTAESGGKGKVIKLLKEKFHFKKIIMIGDGATDMEACPPADAFIGFGGN 195 (217)
T ss_dssp ----CTTSCEEEEC-------------TTSGGGSTTHHHHHHHHHHHHHCCSCEEEEESSHHHHTTTTTSSEEEEECSS
T ss_pred ----eehhccccce-------------eeeeeeccchHHHHHHHHHhccCccccEEEEeCHhhHHHHHhCCceEEECCC
Confidence 0001100000 000113467899999999763 2 3699999999999999999999999853
|
| >d2feaa1 c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: MtnX-like domain: 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX species: Bacillus subtilis [TaxId: 1423]
Probab=98.48 E-value=4.6e-08 Score=102.51 Aligned_cols=124 Identities=15% Similarity=0.148 Sum_probs=90.6
Q ss_pred cCCchhHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCcEEEeecCCCceeeecCCCccccccCChHHHhcccc
Q 001010 674 PIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLTD 753 (1191)
Q Consensus 674 ~lK~da~~~I~~L~~agi~vvMiTGDn~~TA~~VA~~~gI~~~~~~il~~~~~~~~~~w~~~d~~~~~~~~~~~~~~~~~ 753 (1191)
+++|++.+.++.|++.|+++.++||-....+.++.+++|+... +.... +.+. ++
T Consensus 75 ~l~pg~~~~l~~L~~~g~~~~ivS~~~~~~i~~~l~~l~~~~~---~~an~-----~~~~--~~---------------- 128 (226)
T d2feaa1 75 KIREGFREFVAFINEHEIPFYVISGGMDFFVYPLLEGIVEKDR---IYCNH-----ASFD--ND---------------- 128 (226)
T ss_dssp CBCTTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHTTTSCGGG---EEEEE-----EECS--SS----------------
T ss_pred chhHHHHHHHHHHHhcccccccCCcchhhhHHHHHHHcCCccc---eeeee-----EEEe--CC----------------
Confidence 5789999999999999999999999999999999999987521 11000 0000 00
Q ss_pred cceEEEechhhhhhcchHHHHhhcCcceEEeecChhhHHHHHHHHhHcCCEEEEEcCCccCHHHHhhCCceEEeccCCCc
Q 001010 754 AHDLCIGGDCFEMLQQTSAVLRVIPYVKVFARVAPEQKELILTTFKAVGRMTLMCGDGTNDVGALKQAHVGVALLNAVPP 833 (1191)
Q Consensus 754 ~~~l~itG~~l~~l~~~~~~~~~l~~~~VfAR~sP~qK~~iV~~Lq~~g~~V~m~GDG~ND~~ALk~AdVGIAl~~~~~e 833 (1191)
.....+. .......++.+|+.|..+++.++..+..|+|+||+.||.+|+++||+++|++...+.
T Consensus 129 --~~~~~~~--------------~~~~~~~~~~k~~~~~~~~~~~~~~~~~~i~iGDs~~Dl~~a~~A~~~~a~~~~~~~ 192 (226)
T d2feaa1 129 --YIHIDWP--------------HSCKGTCSNQCGCCKPSVIHELSEPNQYIIMIGDSVTDVEAAKLSDLCFARDYLLNE 192 (226)
T ss_dssp --BCEEECT--------------TCCCTTCCSCCSSCHHHHHHHHCCTTCEEEEEECCGGGHHHHHTCSEEEECHHHHHH
T ss_pred --cceeccc--------------cccccccccCCHHHHHHHHHHhcCCCceEEEEeCchhhHHHHHHCCEEEEecchHHH
Confidence 0000000 011124567789999999999999999999999999999999999999999875554
Q ss_pred cccccC
Q 001010 834 TQSGNS 839 (1191)
Q Consensus 834 ~~~~as 839 (1191)
..++..
T Consensus 193 ~~~~~~ 198 (226)
T d2feaa1 193 CREQNL 198 (226)
T ss_dssp HHHTTC
T ss_pred HHHcCC
Confidence 444433
|
| >d1rkua_ c.108.1.11 (A:) Homoserine kinase ThrH {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Homoserine kinase ThrH domain: Homoserine kinase ThrH species: Pseudomonas aeruginosa [TaxId: 287]
Probab=98.44 E-value=3e-07 Score=93.82 Aligned_cols=120 Identities=16% Similarity=0.106 Sum_probs=88.7
Q ss_pred cCCchhHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCcEEEeecCCCceeeecCCCccccccCChHHHhcccc
Q 001010 674 PIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLTD 753 (1191)
Q Consensus 674 ~lK~da~~~I~~L~~agi~vvMiTGDn~~TA~~VA~~~gI~~~~~~il~~~~~~~~~~w~~~d~~~~~~~~~~~~~~~~~ 753 (1191)
+..+.....++.+ +.+.+++.+||........++...++....... +.+...
T Consensus 69 ~~~~~~~~~~~~~-~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~---------l~~~~~------------------ 120 (206)
T d1rkua_ 69 KPLEGAVEFVDWL-RERFQVVILSDTFYEFSQPLMRQLGFPTLLCHK---------LEIDDS------------------ 120 (206)
T ss_dssp CCCTTHHHHHHHH-HTTSEEEEEEEEEHHHHHHHHHHTTCCCEEEEE---------EEECTT------------------
T ss_pred cccchHHHHHHHh-hcCceEEEeccCchHHHHHHHHHhCCchhhcce---------eeeecc------------------
Confidence 4566777777665 578999999999999999999999885211000 011000
Q ss_pred cceEEEechhhhhhcchHHHHhhcCcceEEeecChhhHHHHHHHHhHcCCEEEEEcCCccCHHHHhhCCceEEeccCCCc
Q 001010 754 AHDLCIGGDCFEMLQQTSAVLRVIPYVKVFARVAPEQKELILTTFKAVGRMTLMCGDGTNDVGALKQAHVGVALLNAVPP 833 (1191)
Q Consensus 754 ~~~l~itG~~l~~l~~~~~~~~~l~~~~VfAR~sP~qK~~iV~~Lq~~g~~V~m~GDG~ND~~ALk~AdVGIAl~~~~~e 833 (1191)
..........+..+...++.++.....|+|+|||.||.+||+.|++|||| ++.++
T Consensus 121 ------------------------~~~~~~~~~~~~~~~~~~~~~~i~~~eviaiGDg~NDi~Ml~~Ag~gIAm-na~~~ 175 (206)
T d1rkua_ 121 ------------------------DRVVGYQLRQKDPKRQSVIAFKSLYYRVIAAGDSYNDTTMLSEAHAGILF-HAPEN 175 (206)
T ss_dssp ------------------------SCEEEEECCSSSHHHHHHHHHHHTTCEEEEEECSSTTHHHHHHSSEEEEE-SCCHH
T ss_pred ------------------------cccccccccchhhHHHHHHHhcccccceEEecCCccCHHHHHhCCccEEE-CCCHH
Confidence 01113334455666778888888889999999999999999999999999 68888
Q ss_pred cccccCCcccccc
Q 001010 834 TQSGNSSSEASKD 846 (1191)
Q Consensus 834 ~~~~asdi~~~~~ 846 (1191)
+++++++++..++
T Consensus 176 v~~~~~~~~~~~~ 188 (206)
T d1rkua_ 176 VIREFPQFPAVHT 188 (206)
T ss_dssp HHHHCTTSCEECS
T ss_pred HHHhCCCceeecC
Confidence 9999999987665
|
| >d1nrwa_ c.108.1.10 (A:) Hypothetical protein YwpJ {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YwpJ species: Bacillus subtilis [TaxId: 1423]
Probab=98.43 E-value=3.3e-07 Score=99.15 Aligned_cols=62 Identities=26% Similarity=0.254 Sum_probs=48.4
Q ss_pred ecChh--hHHHHHHHHhHc-C---CEEEEEcCCccCHHHHhhCCceEEeccCCCccccccCCcccccc
Q 001010 785 RVAPE--QKELILTTFKAV-G---RMTLMCGDGTNDVGALKQAHVGVALLNAVPPTQSGNSSSEASKD 846 (1191)
Q Consensus 785 R~sP~--qK~~iV~~Lq~~-g---~~V~m~GDG~ND~~ALk~AdVGIAl~~~~~e~~~~asdi~~~~~ 846 (1191)
...|. .|..-++.+.+. | ..|+++|||.||.+||+.|+.||||+|+.+++++.+..++..++
T Consensus 206 di~~~~~~K~~ai~~l~~~~gi~~~~vi~~GD~~ND~~Ml~~a~~svam~na~~~~k~~A~~v~~~~~ 273 (285)
T d1nrwa_ 206 ELSSRKASKGQALKRLAKQLNIPLEETAAVGDSLNDKSMLEAAGKGVAMGNAREDIKSIADAVTLTND 273 (285)
T ss_dssp EEEETTCSHHHHHHHHHHHTTCCGGGEEEEESSGGGHHHHHHSSEEEECTTCCHHHHHHCSEECCCGG
T ss_pred EEecccchhhhHHHHHHhhcccCcccEEEEeCCHHHHHHHHhCCeEEEeCCCCHHHHHhCCEEcCCCC
Confidence 35565 799999988763 3 36999999999999999999999999988776655555554433
|
| >d1rlma_ c.108.1.10 (A:) Sugar phosphatase SupH (YbiV) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar phosphatase SupH (YbiV) species: Escherichia coli [TaxId: 562]
Probab=98.42 E-value=7.9e-08 Score=103.47 Aligned_cols=63 Identities=17% Similarity=0.138 Sum_probs=49.0
Q ss_pred ecChh--hHHHHHHHHhH-cC---CEEEEEcCCccCHHHHhhCCceEEeccCCCccccccCCccccccc
Q 001010 785 RVAPE--QKELILTTFKA-VG---RMTLMCGDGTNDVGALKQAHVGVALLNAVPPTQSGNSSSEASKDE 847 (1191)
Q Consensus 785 R~sP~--qK~~iV~~Lq~-~g---~~V~m~GDG~ND~~ALk~AdVGIAl~~~~~e~~~~asdi~~~~~~ 847 (1191)
.++|. .|...++.|.+ .| ..|+++|||.||.+||+.|+.||||+|+.+++++.+..++..+++
T Consensus 183 di~p~~~sK~~al~~l~~~lgi~~~~vi~~GD~~ND~~Ml~~ag~~vam~Na~~~lk~~A~~v~~~~~~ 251 (269)
T d1rlma_ 183 DLIIPGLHKANGISRLLKRWDLSPQNVVAIGDSGNDAEMLKMARYSFAMGNAAENIKQIARYATDDNNH 251 (269)
T ss_dssp EEECTTCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHCSEEEECTTCCHHHHHHCSEECCCGGG
T ss_pred EEecCchHHHHHHHHHhhhhccccccEEEEcCCcchHHHHHhCCeEEEeCCCCHHHHHhCCEEcCCCCc
Confidence 45564 59999998866 34 359999999999999999999999999877766666555554443
|
| >d1l6ra_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=98.42 E-value=3.5e-07 Score=95.83 Aligned_cols=163 Identities=11% Similarity=0.076 Sum_probs=91.4
Q ss_pred cCcCCchhHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCcEEEeecCCCceeeecCCCccccccCChHHHh--
Q 001010 672 NCPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVE-- 749 (1191)
Q Consensus 672 ~d~lK~da~~~I~~L~~agi~vvMiTGDn~~TA~~VA~~~gI~~~~~~il~~~~~~~~~~w~~~d~~~~~~~~~~~~~-- 749 (1191)
+..+.+++.+++++|++.|++++++||++...+..+++..|+.. .++.. + +. ..|..... ....+..+...
T Consensus 18 ~~~i~~~~~~al~~l~~~g~~v~~~TGr~~~~~~~~~~~~~~~~--~~i~~-~--G~-~~~~~~~~-~~~~~~~~~~~~~ 90 (225)
T d1l6ra_ 18 DRLISTKAIESIRSAEKKGLTVSLLSGNVIPVVYALKIFLGING--PVFGE-N--GG-IMFDNDGS-IKKFFSNEGTNKF 90 (225)
T ss_dssp TSCBCHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCCS--CEEEG-G--GT-EEECTTSC-EEESSCSHHHHHH
T ss_pred CCcCCHHHHHHHHHHHHCCCEEEEEcCCchhhhHHHHHHcCCCc--eEEee-c--ce-EEEeCCcc-EEEecChHHHHHH
Confidence 34567899999999999999999999999999999999998742 22211 1 00 11111000 00000000000
Q ss_pred ---------------cccccceE--EEechhhhhhcchHHHHhhcCcceE-----EeecCh--hhHHHHHHHHhHc-C--
Q 001010 750 ---------------GLTDAHDL--CIGGDCFEMLQQTSAVLRVIPYVKV-----FARVAP--EQKELILTTFKAV-G-- 802 (1191)
Q Consensus 750 ---------------~~~~~~~l--~itG~~l~~l~~~~~~~~~l~~~~V-----fAR~sP--~qK~~iV~~Lq~~-g-- 802 (1191)
........ ....+..+.+... ... ....+ +....| ..|...++.|.+. |
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~--~~~~i~~~~~~~~i~~~~~~K~~ai~~l~~~~~i~ 166 (225)
T d1l6ra_ 91 LEEMSKRTSMRSILTNRWREASTGFDIDPEDVDYVRKE--AES--RGFVIFYSGYSWHLMNRGEDKAFAVNKLKEMYSLE 166 (225)
T ss_dssp HHHHTTTSSCBCCGGGGGCSSSEEEBCCGGGHHHHHHH--HHT--TTEEEEEETTEEEEEETTCSHHHHHHHHHHHTTCC
T ss_pred HHHHHHhcCcceeecccceeeeeccccCHHHHHHHHHH--Hhh--cCcEEEECCcEEEecCCccchHHHHHHHhhhhccc
Confidence 00001111 1111222111110 000 01111 112223 4788888877653 3
Q ss_pred -CEEEEEcCCccCHHHHhhCCceEEeccCCCccccccCCcccccc
Q 001010 803 -RMTLMCGDGTNDVGALKQAHVGVALLNAVPPTQSGNSSSEASKD 846 (1191)
Q Consensus 803 -~~V~m~GDG~ND~~ALk~AdVGIAl~~~~~e~~~~asdi~~~~~ 846 (1191)
..|+++|||.||.+|+++|++||||+++.++. ++.+|++...+
T Consensus 167 ~~~v~~~GDs~nD~~m~~~a~~~vav~na~~~~-k~~ad~v~~~~ 210 (225)
T d1l6ra_ 167 YDEILVIGDSNNDMPMFQLPVRKACPANATDNI-KAVSDFVSDYS 210 (225)
T ss_dssp GGGEEEECCSGGGHHHHTSSSEEEECTTSCHHH-HHHCSEECSCC
T ss_pred hhheeeecCCcchHHHHHHCCeEEEECCCcHHH-HHhCCEEECCC
Confidence 35899999999999999999999999876654 44566655433
|
| >d1k1ea_ c.108.1.5 (A:) Probable phosphatase YrbI {Haemophilus influenzae, HI1679 [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Probable phosphatase YrbI domain: Probable phosphatase YrbI species: Haemophilus influenzae, HI1679 [TaxId: 727]
Probab=98.37 E-value=2.4e-07 Score=93.77 Aligned_cols=95 Identities=17% Similarity=0.143 Sum_probs=72.4
Q ss_pred HHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCcEEEeecCCCceeeecCCCccccccCChHHHhcccccceEEEe
Q 001010 681 KILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLTDAHDLCIG 760 (1191)
Q Consensus 681 ~~I~~L~~agi~vvMiTGDn~~TA~~VA~~~gI~~~~~~il~~~~~~~~~~w~~~d~~~~~~~~~~~~~~~~~~~~l~it 760 (1191)
.+|+.|++.|+.+.++||++...+...++++++..
T Consensus 39 ~gi~~l~~~gi~~~iis~~~~~~v~~~~~~l~~~~--------------------------------------------- 73 (177)
T d1k1ea_ 39 LGIKMLMDADIQVAVLSGRDSPILRRRIADLGIKL--------------------------------------------- 73 (177)
T ss_dssp HHHHHHHHTTCEEEEEESCCCHHHHHHHHHHTCCE---------------------------------------------
T ss_pred HHHHHHhhhcEEEEEecCCchhHHHHHHhhhcccc---------------------------------------------
Confidence 47999999999999999999999999999999841
Q ss_pred chhhhhhcchHHHHhhcCcceEEeecChhhHHHHHHHHhH-cC---CEEEEEcCCccCHHHHhhCCceEEeccCCCcccc
Q 001010 761 GDCFEMLQQTSAVLRVIPYVKVFARVAPEQKELILTTFKA-VG---RMTLMCGDGTNDVGALKQAHVGVALLNAVPPTQS 836 (1191)
Q Consensus 761 G~~l~~l~~~~~~~~~l~~~~VfAR~sP~qK~~iV~~Lq~-~g---~~V~m~GDG~ND~~ALk~AdVGIAl~~~~~e~~~ 836 (1191)
++.- ..+|...++.+.+ .| ..|+++|||.||.++|+.|++|+|++++.++++
T Consensus 74 ---------------------~~~~--~~~K~~~l~~~~~~~~i~~~~v~~vGDd~nDl~~l~~~g~siap~nA~~~vk- 129 (177)
T d1k1ea_ 74 ---------------------FFLG--KLEKETACFDLMKQAGVTAEQTAYIGDDSVDLPAFAACGTSFAVADAPIYVK- 129 (177)
T ss_dssp ---------------------EEES--CSCHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHH-
T ss_pred ---------------------cccc--cccHHHHHHHHHHHhcCCcceeEEecCCccHHHHHhhCCeEEEcCCccHHHH-
Confidence 2222 2334444444333 33 579999999999999999999999998776654
Q ss_pred ccCCcccc
Q 001010 837 GNSSSEAS 844 (1191)
Q Consensus 837 ~asdi~~~ 844 (1191)
..+++++.
T Consensus 130 ~~A~~Vt~ 137 (177)
T d1k1ea_ 130 NAVDHVLS 137 (177)
T ss_dssp TTSSEECS
T ss_pred HhCCEEeC
Confidence 44555543
|
| >d1wzca1 c.108.1.10 (A:1-243) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=98.37 E-value=1.3e-06 Score=91.52 Aligned_cols=43 Identities=12% Similarity=0.165 Sum_probs=38.8
Q ss_pred cCcCCchhHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCC
Q 001010 672 NCPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIV 714 (1191)
Q Consensus 672 ~d~lK~da~~~I~~L~~agi~vvMiTGDn~~TA~~VA~~~gI~ 714 (1191)
.+...+.++++|++|+++|+.++++||.++..+..+.+++++.
T Consensus 15 ~~~~~~~~~~ai~~l~~~G~~~~~aTGR~~~~~~~~~~~~~~~ 57 (243)
T d1wzca1 15 PGYEPDPAKPIIEELKDMGFEIIFNSSKTRAEQEYYRKELEVE 57 (243)
T ss_dssp SSSCSGGGHHHHHHHHHTTEEEEEECSSCHHHHHHHHHHHTCC
T ss_pred CCCCCHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHhccc
Confidence 3444678999999999999999999999999999999999985
|
| >d2b30a1 c.108.1.10 (A:18-300) PFL1270w orthologue {Plasmodium vivax [TaxId: 5855]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: PFL1270w orthologue species: Plasmodium vivax [TaxId: 5855]
Probab=98.29 E-value=7.4e-07 Score=95.89 Aligned_cols=41 Identities=7% Similarity=0.120 Sum_probs=37.2
Q ss_pred CcCCchhHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCC
Q 001010 673 CPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHI 713 (1191)
Q Consensus 673 d~lK~da~~~I~~L~~agi~vvMiTGDn~~TA~~VA~~~gI 713 (1191)
.++-+.+.++|++|++.|++++++||.+...+..+++++++
T Consensus 27 ~~i~~~~~~al~~l~~~Gi~v~i~TGR~~~~~~~~~~~l~~ 67 (283)
T d2b30a1 27 IKVPSENIDAIKEAIEKGYMVSICTGRSKVGILSAFGEENL 67 (283)
T ss_dssp TCSCHHHHHHHHHHHHHTCEEEEECSSCHHHHHHHHCHHHH
T ss_pred CcCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHhCc
Confidence 35778999999999999999999999999999999988764
|
| >d2rbka1 c.108.1.10 (A:2-261) Sugar-phosphate phosphatase BT4131 {Bacteroides thetaiotaomicron [TaxId: 818]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar-phosphate phosphatase BT4131 species: Bacteroides thetaiotaomicron [TaxId: 818]
Probab=98.23 E-value=7.9e-07 Score=95.17 Aligned_cols=63 Identities=29% Similarity=0.374 Sum_probs=48.8
Q ss_pred eecChh--hHHHHHHHHhHc-C---CEEEEEcCCccCHHHHhhCCceEEeccCCCccccccCCcccccc
Q 001010 784 ARVAPE--QKELILTTFKAV-G---RMTLMCGDGTNDVGALKQAHVGVALLNAVPPTQSGNSSSEASKD 846 (1191)
Q Consensus 784 AR~sP~--qK~~iV~~Lq~~-g---~~V~m~GDG~ND~~ALk~AdVGIAl~~~~~e~~~~asdi~~~~~ 846 (1191)
..+.|. .|...++.|.+. | ..++++|||.||.+||+.|+.||||+|+.+++++.+..++..++
T Consensus 178 ~ei~p~~~sK~~al~~l~~~~~i~~~~~~a~GD~~ND~~Ml~~a~~svav~na~~~lk~~A~~vt~~~~ 246 (260)
T d2rbka1 178 ADVTAKGDTKQKGIDEIIRHFGIKLEETMSFGDGGNDISMLRHAAIGVAMGQAKEDVKAAADYVTAPID 246 (260)
T ss_dssp CEEESTTCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHHHSSEECCCGG
T ss_pred EEEEeCCCCHHHHHHHHHHhccccHhheeEecCCcccHHHHHhCCeEEEeCCCCHHHHHhCCEEeCCCC
Confidence 344554 699998888652 3 46999999999999999999999999988777666655555444
|
| >d1nf2a_ c.108.1.10 (A:) Hypothetical protein TM0651 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein TM0651 species: Thermotoga maritima [TaxId: 2336]
Probab=98.18 E-value=4.2e-06 Score=89.68 Aligned_cols=63 Identities=19% Similarity=0.326 Sum_probs=48.0
Q ss_pred ecChh--hHHHHHHHHhHc-C---CEEEEEcCCccCHHHHhhCCceEEeccCCCccccccCCccccccc
Q 001010 785 RVAPE--QKELILTTFKAV-G---RMTLMCGDGTNDVGALKQAHVGVALLNAVPPTQSGNSSSEASKDE 847 (1191)
Q Consensus 785 R~sP~--qK~~iV~~Lq~~-g---~~V~m~GDG~ND~~ALk~AdVGIAl~~~~~e~~~~asdi~~~~~~ 847 (1191)
.++|. .|...|+.|.+. | ..|+++|||.||.+||+.|++||||+|+.+++++.+..++.++++
T Consensus 183 di~~~~~~K~~ai~~l~~~~~i~~~~vva~GD~~ND~~ml~~~~~sva~~na~~~~k~~A~~i~~~~~~ 251 (267)
T d1nf2a_ 183 EIVPKNVDKGKALRFLRERMNWKKEEIVVFGDNENDLFMFEEAGLRVAMENAIEKVKEASDIVTLTNND 251 (267)
T ss_dssp EEECTTCCHHHHHHHHHHHHTCCGGGEEEEECSHHHHHHHTTCSEEEECTTSCHHHHHHCSEECCCTTT
T ss_pred eecCCCCchhHHHHHHHHhhccCcccEEEEcCCcchHHHHHhCCcEEEeCCCCHHHHHhCCEEcCCCCc
Confidence 34554 699999888653 3 358999999999999999999999998877665555555554443
|
| >d1j97a_ c.108.1.4 (A:) Phosphoserine phosphatase {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=98.12 E-value=1.2e-06 Score=89.32 Aligned_cols=128 Identities=19% Similarity=0.126 Sum_probs=80.7
Q ss_pred cCcCCchhHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCcEEEeecCCCceeeecCCCccccccCChHHHhcc
Q 001010 672 NCPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGL 751 (1191)
Q Consensus 672 ~d~lK~da~~~I~~L~~agi~vvMiTGDn~~TA~~VA~~~gI~~~~~~il~~~~~~~~~~w~~~d~~~~~~~~~~~~~~~ 751 (1191)
..++.+++.+.++.++..|+.++++||.....+....++.++...-...+. +..
T Consensus 73 ~~~~~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~----------------- 126 (210)
T d1j97a_ 73 RITPTEGAEETIKELKNRGYVVAVVSGGFDIAVNKIKEKLGLDYAFANRLI---------VKD----------------- 126 (210)
T ss_dssp TCCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCSEEEEEEEE---------EET-----------------
T ss_pred hhhhhhhHHHHHHHHHHcCCEEEeecccccccccchhhccchhhhhhhhhc---------ccc-----------------
Confidence 457889999999999999999999999999999999999887521000000 000
Q ss_pred cccceEEEechhhhhhcchHHHHhhcCcceEEeecChhhHHHHHHHHhHcCCEEEEEcCCccCHHHHhhCCceEEeccCC
Q 001010 752 TDAHDLCIGGDCFEMLQQTSAVLRVIPYVKVFARVAPEQKELILTTFKAVGRMTLMCGDGTNDVGALKQAHVGVALLNAV 831 (1191)
Q Consensus 752 ~~~~~l~itG~~l~~l~~~~~~~~~l~~~~VfAR~sP~qK~~iV~~Lq~~g~~V~m~GDG~ND~~ALk~AdVGIAl~~~~ 831 (1191)
........ .....+...+.-...+.+.++-....++|+|||.||.+|++.|++|||| ++.
T Consensus 127 ---~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~i~iGDs~nDi~m~~~ag~~va~-na~ 186 (210)
T d1j97a_ 127 ---GKLTGDVE----------------GEVLKENAKGEILEKIAKIEGINLEDTVAVGDGANDISMFKKAGLKIAF-CAK 186 (210)
T ss_dssp ---TEEEEEEE----------------CSSCSTTHHHHHHHHHHHHHTCCGGGEEEEESSGGGHHHHHHCSEEEEE-SCC
T ss_pred ---cccccccc----------------ccccccccccchhhhHHHHhcccccceEEecCCcChHHHHHHCCCCEEE-CCC
Confidence 00000000 0000111112222333333433445799999999999999999999999 565
Q ss_pred CccccccCCcccccc
Q 001010 832 PPTQSGNSSSEASKD 846 (1191)
Q Consensus 832 ~e~~~~asdi~~~~~ 846 (1191)
+++ ++.++.+...+
T Consensus 187 ~~l-k~~Ad~vi~~~ 200 (210)
T d1j97a_ 187 PIL-KEKADICIEKR 200 (210)
T ss_dssp HHH-HTTCSEEECSS
T ss_pred HHH-HHhCCEEEcCC
Confidence 554 45567666443
|
| >d1xvia_ c.108.1.10 (A:) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Escherichia coli [TaxId: 562]
Probab=98.00 E-value=2.1e-05 Score=81.22 Aligned_cols=42 Identities=10% Similarity=0.168 Sum_probs=38.7
Q ss_pred CcCCchhHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCC
Q 001010 673 CPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIV 714 (1191)
Q Consensus 673 d~lK~da~~~I~~L~~agi~vvMiTGDn~~TA~~VA~~~gI~ 714 (1191)
..+-+.++++|++|+++|+.++++||.+...+..+.+++++-
T Consensus 20 ~~i~~~~~~al~~l~~~Gi~~~i~TGR~~~~~~~~~~~~~~~ 61 (232)
T d1xvia_ 20 SYDWQPAAPWLTRLREANVPVILCSSKTSAEMLYLQKTLGLQ 61 (232)
T ss_dssp CCSCCTTHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHTTCT
T ss_pred CcCCHHHHHHHHHHHHCCCEEEEEeCCChhhchhHHHHhccC
Confidence 346788999999999999999999999999999999999974
|
| >d1s2oa1 c.108.1.10 (A:1-244) Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc 6803 [TaxId: 1148]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sucrose-phosphatase Slr0953 species: Synechocystis sp. pcc 6803 [TaxId: 1148]
Probab=97.67 E-value=5.7e-05 Score=79.25 Aligned_cols=50 Identities=28% Similarity=0.389 Sum_probs=41.8
Q ss_pred hhhHHHHHHHHhHc-C---CEEEEEcCCccCHHHHhhCCceEEeccCCCccccc
Q 001010 788 PEQKELILTTFKAV-G---RMTLMCGDGTNDVGALKQAHVGVALLNAVPPTQSG 837 (1191)
Q Consensus 788 P~qK~~iV~~Lq~~-g---~~V~m~GDG~ND~~ALk~AdVGIAl~~~~~e~~~~ 837 (1191)
...|...++.|.+. | ..|+++|||.||.+||+.|+.|++|+|+.+++++.
T Consensus 160 ~~~K~~a~~~l~~~~gi~~~~~v~~GD~~ND~~Ml~~~~~~vav~na~~~lk~~ 213 (244)
T d1s2oa1 160 RSNKGNATQYLQQHLAMEPSQTLVCGDSGNDIGLFETSARGVIVRNAQPELLHW 213 (244)
T ss_dssp TCSHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHTSSSEEEECTTCCHHHHHH
T ss_pred ccchhHHHHHHHHhccCChhhEEEEcCCCCCHHHHhhCCcEEEeCCCCHHHHHH
Confidence 45799999988774 3 34889999999999999999999999887776443
|
| >d1te2a_ c.108.1.6 (A:) Phosphatase YniC {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphatase YniC species: Escherichia coli [TaxId: 562]
Probab=96.62 E-value=0.002 Score=65.53 Aligned_cols=97 Identities=10% Similarity=0.045 Sum_probs=68.7
Q ss_pred cCCchhHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCcEEEeecCCCceeeecCCCccccccCChHHHhcccc
Q 001010 674 PIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLTD 753 (1191)
Q Consensus 674 ~lK~da~~~I~~L~~agi~vvMiTGDn~~TA~~VA~~~gI~~~~~~il~~~~~~~~~~w~~~d~~~~~~~~~~~~~~~~~ 753 (1191)
++.|++.++++.|++.|+++.++||.....+..+.+..|+.+-=
T Consensus 88 ~~~pg~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~~l~~~F------------------------------------ 131 (218)
T d1te2a_ 88 PLLPGVREAVALCKEQGLLVGLASASPLHMLEKVLTMFDLRDSF------------------------------------ 131 (218)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGC------------------------------------
T ss_pred cccchHHHHHHHhhhccccccccccccccccccccccccccccc------------------------------------
Confidence 45799999999999999999999999999999999999994211
Q ss_pred cceEEEechhhhhhcchHHHHhhcCcceEEeecChhhHHHHHHHHhHcCCEEEEEcCCccCHHHHhhCCceE
Q 001010 754 AHDLCIGGDCFEMLQQTSAVLRVIPYVKVFARVAPEQKELILTTFKAVGRMTLMCGDGTNDVGALKQAHVGV 825 (1191)
Q Consensus 754 ~~~l~itG~~l~~l~~~~~~~~~l~~~~VfAR~sP~qK~~iV~~Lq~~g~~V~m~GDG~ND~~ALk~AdVGI 825 (1191)
+-+++++... .++-.|+-=..+++.+.-....++|+||..+|+.|-+.|++..
T Consensus 132 --~~i~~~~~~~-----------------~~Kp~~~~~~~~~~~l~~~~~~~l~igD~~~di~aA~~~G~~~ 184 (218)
T d1te2a_ 132 --DALASAEKLP-----------------YSKPHPQVYLDCAAKLGVDPLTCVALEDSVNGMIASKAARMRS 184 (218)
T ss_dssp --SEEEECTTSS-----------------CCTTSTHHHHHHHHHHTSCGGGEEEEESSHHHHHHHHHTTCEE
T ss_pred --cccccccccc-----------------cchhhHHHHHHHHHHcCCCchhcEEEeeCHHHHHHHHHcCCEE
Confidence 1122222110 0111222233445555444567999999999999999999744
|
| >d1u02a_ c.108.1.15 (A:) Trehalose-6-phosphate phosphatase related protein {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Trehalose-phosphatase domain: Trehalose-6-phosphate phosphatase related protein species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=96.50 E-value=0.00065 Score=69.32 Aligned_cols=45 Identities=11% Similarity=0.211 Sum_probs=36.4
Q ss_pred ecChh--hHHHHHHHHhHcCCEEEEEcCCccCHHHHhhCCceEEeccC
Q 001010 785 RVAPE--QKELILTTFKAVGRMTLMCGDGTNDVGALKQAHVGVALLNA 830 (1191)
Q Consensus 785 R~sP~--qK~~iV~~Lq~~g~~V~m~GDG~ND~~ALk~AdVGIAl~~~ 830 (1191)
...|. .|...++.|.+.. .++++||+.||.+|++.|+-|+|+.++
T Consensus 152 di~p~g~~Kg~al~~l~~~~-~~i~~GDs~ND~~Mf~~~~~~~av~~g 198 (229)
T d1u02a_ 152 ELRVPGVNKGSAIRSVRGER-PAIIAGDDATDEAAFEANDDALTIKVG 198 (229)
T ss_dssp EEECTTCCHHHHHHHHHTTS-CEEEEESSHHHHHHHHTTTTSEEEEES
T ss_pred EEecCCCCHHHHHHHHhccc-cceeecCCCChHHHHhccCCeEEEEeC
Confidence 34443 6999999998764 577899999999999999888777654
|
| >d2hcfa1 c.108.1.6 (A:2-229) Hypothetical protein CT1708 {Chlorobium tepidum [TaxId: 1097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein CT1708 species: Chlorobium tepidum [TaxId: 1097]
Probab=96.40 E-value=0.0021 Score=65.91 Aligned_cols=41 Identities=20% Similarity=0.177 Sum_probs=37.1
Q ss_pred cCCchhHHHHHHHHhcC-CcEEEEcCCCHHHHHHHHHHcCCC
Q 001010 674 PIREDSAKILSELKNSS-QDLAMITGDQALTACYVASQVHIV 714 (1191)
Q Consensus 674 ~lK~da~~~I~~L~~ag-i~vvMiTGDn~~TA~~VA~~~gI~ 714 (1191)
++-|++.+++++|++.| +++.++||.....+..+.+..|+.
T Consensus 91 ~~~~g~~~~L~~L~~~g~~~~~v~t~~~~~~~~~~l~~~gl~ 132 (228)
T d2hcfa1 91 TLLEGVRELLDALSSRSDVLLGLLTGNFEASGRHKLKLPGID 132 (228)
T ss_dssp EECTTHHHHHHHHHTCTTEEEEEECSSCHHHHHHHHHTTTCS
T ss_pred eecCchHHHHhhhhccccccccccCCCcchhhhhhhhhhccc
Confidence 44689999999999987 899999999999999999999985
|
| >d2bdua1 c.108.1.21 (A:7-297) Cytosolic 5'-nucleotidase III {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Pyrimidine 5'-nucleotidase (UMPH-1) domain: Cytosolic 5'-nucleotidase III species: Mouse (Mus musculus) [TaxId: 10090]
Probab=96.36 E-value=0.0027 Score=68.20 Aligned_cols=48 Identities=10% Similarity=0.126 Sum_probs=42.7
Q ss_pred cCCchhHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCcEEE
Q 001010 674 PIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLIL 721 (1191)
Q Consensus 674 ~lK~da~~~I~~L~~agi~vvMiTGDn~~TA~~VA~~~gI~~~~~~il 721 (1191)
+||+++++.++.|++.|+.+.++||--......++++.|+...+.-+.
T Consensus 135 ~Lr~G~~e~~~~l~~~~i~~~IvSgG~~~~ie~vl~~lg~~~~ni~I~ 182 (291)
T d2bdua1 135 MLKEGYENFFGKLQQHGIPVFIFSAGIGDVLEEVIRQAGVYHSNVKVV 182 (291)
T ss_dssp CBCBTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHHHTTCCBTTEEEE
T ss_pred CcccCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHHcCCCccCceEE
Confidence 589999999999999999999999999999999999999975444443
|
| >d2hsza1 c.108.1.6 (A:1-224) Phosphoglycolate phosphatase Gph {Haemophilus somnus [TaxId: 731]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphoglycolate phosphatase Gph species: Haemophilus somnus [TaxId: 731]
Probab=96.33 E-value=0.0051 Score=62.22 Aligned_cols=100 Identities=21% Similarity=0.197 Sum_probs=70.8
Q ss_pred cCCchhHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCcEEEeecCCCceeeecCCCccccccCChHHHhcccc
Q 001010 674 PIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLTD 753 (1191)
Q Consensus 674 ~lK~da~~~I~~L~~agi~vvMiTGDn~~TA~~VA~~~gI~~~~~~il~~~~~~~~~~w~~~d~~~~~~~~~~~~~~~~~ 753 (1191)
++.|++.++++.|++.|+++.++||.....+..+.+++||...-..++
T Consensus 95 ~l~~~~~~~L~~L~~~g~~~~i~tn~~~~~~~~~l~~~gl~~~f~~~~-------------------------------- 142 (224)
T d2hsza1 95 RLYPNVKETLEALKAQGYILAVVTNKPTKHVQPILTAFGIDHLFSEML-------------------------------- 142 (224)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGCSEEE--------------------------------
T ss_pred chHHHHHHHHHHHhccCCcccccccccHHHHHHHHHhcCchhhccccc--------------------------------
Confidence 567999999999999999999999999999999999999852111111
Q ss_pred cceEEEechhhhhhcchHHHHhhcCcceEEeecChhhHHHHHHHHhHcCCEEEEEcCCccCHHHHhhCCc-eEEec
Q 001010 754 AHDLCIGGDCFEMLQQTSAVLRVIPYVKVFARVAPEQKELILTTFKAVGRMTLMCGDGTNDVGALKQAHV-GVALL 828 (1191)
Q Consensus 754 ~~~l~itG~~l~~l~~~~~~~~~l~~~~VfAR~sP~qK~~iV~~Lq~~g~~V~m~GDG~ND~~ALk~AdV-GIAl~ 828 (1191)
++... -...-.|+--..+.+.++-....++|+||..+|..+-+.|++ .|.+.
T Consensus 143 ------~~~~~-----------------~~~kp~p~~~~~~~~~~~~~~~~~~~igD~~~Di~~A~~aG~~~i~v~ 195 (224)
T d2hsza1 143 ------GGQSL-----------------PEIKPHPAPFYYLCGKFGLYPKQILFVGDSQNDIFAAHSAGCAVVGLT 195 (224)
T ss_dssp ------CTTTS-----------------SSCTTSSHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHHTCEEEEES
T ss_pred ------ccccc-----------------ccccccchhhHHHHHHhhhhhhccchhcCcHHHHHHHHHcCCeEEEEe
Confidence 11100 001112343344555555556679999999999999999987 44444
|
| >d2a29a1 d.220.1.1 (A:316-451) Potassium-transporting ATPase B chain, KdpB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Potassium-transporting ATPase B chain, KdpB species: Escherichia coli [TaxId: 562]
Probab=96.21 E-value=0.011 Score=55.89 Aligned_cols=103 Identities=12% Similarity=0.188 Sum_probs=69.7
Q ss_pred cCChHHHHHHhcccccccCCCccccCCCCCCcccEEEEecCCCCCCcEEEEEEeCCeEEEEEeCcHHHHHHhc----cCC
Q 001010 542 VGDPLEKAALKGIDWSYKSDEKAMPKRGGGNAVQIVQRHHFASHLKRMSVVVRVQEEFFAFVKGAPETIQDRL----TDL 617 (1191)
Q Consensus 542 ~GdPle~all~~~~~~~~~~~~~~~~~~~~~~~~il~~~~Fss~~krmsvvv~~~~~~~~~~KGapE~I~~~~----~~~ 617 (1191)
+-||+.+|+++++.-........ ....-..-.+|....+..+ +..+++ .+.+|++..+.+++ ..+
T Consensus 29 SeHPlakAIv~~Ak~~~~~~~~~-------~~~~~~~~~~~~~~~~~~g--~~~~g~--~v~~G~~~~~~~~~~~~g~~~ 97 (136)
T d2a29a1 29 DETPEGRSIVILAKQRFNLRERD-------VQSLHATFVPFTAQSRMSG--INIDNR--MIRKGSVDAIRRHVEANGGHF 97 (136)
T ss_dssp CCSHHHHHHHHHHHHHHCCCCCC-------TTTTTCEEEEEETTTTEEE--EEETTE--EEEEECHHHHHHHHHHHTCCC
T ss_pred CCchHHHHHHHHHHHhcCCCccc-------cccccccccccccccceEE--EEECCE--EEEecHHHHHHHHHHHcCCCC
Confidence 46899999999774221111000 0111112334444443222 233444 67889998887665 578
Q ss_pred hHHHHHHHHHHHHhcCeeeeEEEEeCCCCChhhhhhccccccccCeEEeeeecccCcCC
Q 001010 618 PSSYIETYKKYTHQGSRVLALAFKSLPDMTVSDARSLHRDEVENGLTFAGFAVFNCPIR 676 (1191)
Q Consensus 618 p~~~~~~~~~~a~~G~RVLalA~k~l~~~~~~~~~~~~r~~~E~dL~flG~l~~~d~lK 676 (1191)
|++..+..+.+..+|.+++.+|. |-+++|++.+.|++|
T Consensus 98 ~~~~~~~~~~~~~~G~Tvv~Va~---------------------d~~~~G~i~l~D~iK 135 (136)
T d2a29a1 98 PTDVDQKVDQVARQGATPLVVVE---------------------GSRVLGVIALKDIVK 135 (136)
T ss_dssp CHHHHHHHHHHHHTTSEEEEEEE---------------------TTEEEEEEEEEESSC
T ss_pred cHHHHHHHHHHHHCCCeEEEEEE---------------------CCEEEEEEEEEeecC
Confidence 99999999999999999999994 568999999999998
|
| >d2fuea1 c.108.1.10 (A:13-256) Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphomannomutase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.98 E-value=0.0012 Score=67.51 Aligned_cols=44 Identities=18% Similarity=0.282 Sum_probs=36.7
Q ss_pred hHHHHHHHHhHc-CCEEEEEcC----CccCHHHHhhCC-ceEEeccCCCc
Q 001010 790 QKELILTTFKAV-GRMTLMCGD----GTNDVGALKQAH-VGVALLNAVPP 833 (1191)
Q Consensus 790 qK~~iV~~Lq~~-g~~V~m~GD----G~ND~~ALk~Ad-VGIAl~~~~~e 833 (1191)
.|..-++.|.+. ...|+++|| |.||.+||++|+ .|+||+|+.++
T Consensus 185 sKg~al~~L~~~~~~ev~afGD~~~~G~ND~eml~~a~~~~~av~na~~~ 234 (244)
T d2fuea1 185 DKRYCLDSLDQDSFDTIHFFGNETSPGGNDFEIFADPRTVGHSVVSPQDT 234 (244)
T ss_dssp STTHHHHHHTTSCCSEEEEEESCCSTTSTTHHHHHSTTSEEEECSSHHHH
T ss_pred cHHHHHHHHhcCChhhEEEEcCCCCCCCCcHHHHHcCCCcEEEcCCHHHH
Confidence 688889988764 458999999 669999999997 69999976543
|
| >d2go7a1 c.108.1.6 (A:3-206) Hypothetical protein SP2064 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein SP2064 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=95.93 E-value=0.0037 Score=62.75 Aligned_cols=96 Identities=14% Similarity=0.142 Sum_probs=64.1
Q ss_pred cCCchhHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCcEEEeecCCCceeeecCCCccccccCChHHHhcccc
Q 001010 674 PIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLTD 753 (1191)
Q Consensus 674 ~lK~da~~~I~~L~~agi~vvMiTGDn~~TA~~VA~~~gI~~~~~~il~~~~~~~~~~w~~~d~~~~~~~~~~~~~~~~~ 753 (1191)
++.|++.++++.|++.|+++.++|+... .+..+-+..|+..-
T Consensus 82 ~~~pgv~~~L~~L~~~g~~~~v~Sn~~~-~~~~~l~~~gl~~~------------------------------------- 123 (204)
T d2go7a1 82 VLMPGAREVLAWADESGIQQFIYTHKGN-NAFTILKDLGVESY------------------------------------- 123 (204)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCT-HHHHHHHHHTCGGG-------------------------------------
T ss_pred cccchHHhhhhcccccccchhhhcccch-hhhhhhhhcccccc-------------------------------------
Confidence 5679999999999999999999998554 56678888888421
Q ss_pred cceEEEechhhhhhcchHHHHhhcCcceEEeecChhhHHHHHHHHhHcCCEEEEEcCCccCHHHHhhCCceE
Q 001010 754 AHDLCIGGDCFEMLQQTSAVLRVIPYVKVFARVAPEQKELILTTFKAVGRMTLMCGDGTNDVGALKQAHVGV 825 (1191)
Q Consensus 754 ~~~l~itG~~l~~l~~~~~~~~~l~~~~VfAR~sP~qK~~iV~~Lq~~g~~V~m~GDG~ND~~ALk~AdVGI 825 (1191)
++..++++.. ....=.|+-=..+++.+.-....++|+||+.+|..+-+.|++..
T Consensus 124 -f~~i~~s~~~-----------------~~~Kp~~~~~~~~~~~~~~~p~~~l~VgD~~~Di~~A~~~G~~~ 177 (204)
T d2go7a1 124 -FTEILTSQSG-----------------FVRKPSPEAATYLLDKYQLNSDNTYYIGDRTLDVEFAQNSGIQS 177 (204)
T ss_dssp -EEEEECGGGC-----------------CCCTTSSHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHHTCEE
T ss_pred -cccccccccc-----------------cccchhHHHHHHHHHHhCCCCceEEEEeCCHHHHHHHHHcCCeE
Confidence 1111111110 01111233334444444434468999999999999999999853
|
| >d1u7pa_ c.108.1.17 (A:) Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Magnesium-dependent phosphatase-1, Mdp1 domain: Magnesium-dependent phosphatase-1, Mdp1 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=94.96 E-value=0.019 Score=55.78 Aligned_cols=40 Identities=10% Similarity=0.129 Sum_probs=32.5
Q ss_pred cCCchhHHHHHHHHhcCCcEEEEcCCC-HHHHHHHHHHcCC
Q 001010 674 PIREDSAKILSELKNSSQDLAMITGDQ-ALTACYVASQVHI 713 (1191)
Q Consensus 674 ~lK~da~~~I~~L~~agi~vvMiTGDn-~~TA~~VA~~~gI 713 (1191)
++.|++.++++.|++.|+++.++|+-+ ...+...-+..++
T Consensus 46 ~l~pgv~e~L~~L~~~G~~~~v~S~~~~~~~~~~~l~~~~~ 86 (164)
T d1u7pa_ 46 QLYPEVPEVLGRLQSLGVPVAAASRTSEIQGANQLLELFDL 86 (164)
T ss_dssp CCCTTHHHHHHHHHHTTCCEEEEECCSCHHHHHHHHHHTTC
T ss_pred ccchHHHHHHHHHHHCCCcEEEEeccccchhhccchhcccc
Confidence 578999999999999999999999654 4556666666665
|
| >d2ah5a1 c.108.1.6 (A:1-210) predicted phosphatase SP0104 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: predicted phosphatase SP0104 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=94.26 E-value=0.027 Score=56.19 Aligned_cols=98 Identities=19% Similarity=0.153 Sum_probs=68.0
Q ss_pred CcCCchhHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCcEEEeecCCCceeeecCCCccccccCChHHHhccc
Q 001010 673 CPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLT 752 (1191)
Q Consensus 673 d~lK~da~~~I~~L~~agi~vvMiTGDn~~TA~~VA~~~gI~~~~~~il~~~~~~~~~~w~~~d~~~~~~~~~~~~~~~~ 752 (1191)
.++.+++.+.++.|+..+ ++.++|+.....+..+.+..|+..-=
T Consensus 83 ~~~~~~~~~~l~~l~~~~-~~~i~t~~~~~~~~~~l~~~gl~~~f----------------------------------- 126 (210)
T d2ah5a1 83 AQLFPQIIDLLEELSSSY-PLYITTTKDTSTAQDMAKNLEIHHFF----------------------------------- 126 (210)
T ss_dssp CEECTTHHHHHHHHHTTS-CEEEEEEEEHHHHHHHHHHTTCGGGC-----------------------------------
T ss_pred ccchhHHHHHHhhhhccc-chhhcccccchhhhHHHHhhcccccc-----------------------------------
Confidence 356799999999998775 88999999999999999999985211
Q ss_pred ccceEEEechhhhhhcchHHHHhhcCcceEEeecChhhHHHHHHHHhHcCCEEEEEcCCccCHHHHhhCCc-eEEec
Q 001010 753 DAHDLCIGGDCFEMLQQTSAVLRVIPYVKVFARVAPEQKELILTTFKAVGRMTLMCGDGTNDVGALKQAHV-GVALL 828 (1191)
Q Consensus 753 ~~~~l~itG~~l~~l~~~~~~~~~l~~~~VfAR~sP~qK~~iV~~Lq~~g~~V~m~GDG~ND~~ALk~AdV-GIAl~ 828 (1191)
+.++++.. ..+..|+--..+++.++-....++|+||+.||+.|-++|++ .|++.
T Consensus 127 ---d~v~~~~~-------------------~~~~~p~~~~~~~~~~~~~~~~~v~VGDs~~Di~aa~~aGi~~i~v~ 181 (210)
T d2ah5a1 127 ---DGIYGSSP-------------------EAPHKADVIHQALQTHQLAPEQAIIIGDTKFDMLGARETGIQKLAIT 181 (210)
T ss_dssp ---SEEEEECS-------------------SCCSHHHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEES
T ss_pred ---cccccccc-------------------cccccccccchhhhhhhcccccceeecCCHHHHHHHHHcCCeEEEEc
Confidence 11111111 11233443344444444344579999999999999999998 55554
|
| >d2hdoa1 c.108.1.6 (A:1-207) Phosphoglycolate phosphatase {Lactobacillus plantarum [TaxId: 1590]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphoglycolate phosphatase species: Lactobacillus plantarum [TaxId: 1590]
Probab=94.16 E-value=0.018 Score=57.73 Aligned_cols=99 Identities=14% Similarity=0.149 Sum_probs=67.0
Q ss_pred cCCchhHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCcEEEeecCCCceeeecCCCccccccCChHHHhcccc
Q 001010 674 PIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLTD 753 (1191)
Q Consensus 674 ~lK~da~~~I~~L~~agi~vvMiTGDn~~TA~~VA~~~gI~~~~~~il~~~~~~~~~~w~~~d~~~~~~~~~~~~~~~~~ 753 (1191)
++.|++.++++.|++ ++++.++|+-....+..+.++.|+...
T Consensus 82 ~~~~g~~~~L~~l~~-~~~~~ivT~~~~~~~~~~l~~~~l~~~------------------------------------- 123 (207)
T d2hdoa1 82 ELYPGITSLFEQLPS-ELRLGIVTSQRRNELESGMRSYPFMMR------------------------------------- 123 (207)
T ss_dssp EECTTHHHHHHHSCT-TSEEEEECSSCHHHHHHHHTTSGGGGG-------------------------------------
T ss_pred ccccchhhhhhhhcc-ccccccccccccccccccccccccccc-------------------------------------
Confidence 567999999999975 799999999999999999999998521
Q ss_pred cceEEEechhhhhhcchHHHHhhcCcceEEeecChhhHHHHHHHHhHcCCEEEEEcCCccCHHHHhhCCceEEec
Q 001010 754 AHDLCIGGDCFEMLQQTSAVLRVIPYVKVFARVAPEQKELILTTFKAVGRMTLMCGDGTNDVGALKQAHVGVALL 828 (1191)
Q Consensus 754 ~~~l~itG~~l~~l~~~~~~~~~l~~~~VfAR~sP~qK~~iV~~Lq~~g~~V~m~GDG~ND~~ALk~AdVGIAl~ 828 (1191)
++.+++++... ...=.|+--..+++.++-....++|+||..+|+.|-++|++...+-
T Consensus 124 -f~~i~~~~~~~-----------------~~KP~p~~~~~~~~~~~~~~~~~l~VgDs~~Di~~a~~aG~~~i~v 180 (207)
T d2hdoa1 124 -MAVTISADDTP-----------------KRKPDPLPLLTALEKVNVAPQNALFIGDSVSDEQTAQAANVDFGLA 180 (207)
T ss_dssp -EEEEECGGGSS-----------------CCTTSSHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEE
T ss_pred -ccccccccccc-----------------cchhhhhhhcccccceeeeccceeEecCCHHHHHHHHHcCCeEEEE
Confidence 11122222110 0011233333444444323357999999999999999999876654
|
| >d1zs9a1 c.108.1.22 (A:4-256) E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Enolase-phosphatase E1 domain: E-1 enzyme species: Human(Homo sapiens) [TaxId: 9606]
Probab=94.06 E-value=0.054 Score=54.87 Aligned_cols=42 Identities=2% Similarity=-0.004 Sum_probs=38.2
Q ss_pred CcCCchhHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCC
Q 001010 673 CPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIV 714 (1191)
Q Consensus 673 d~lK~da~~~I~~L~~agi~vvMiTGDn~~TA~~VA~~~gI~ 714 (1191)
-.+.||+.+++++|++.|+++.++|+..........+.+|+.
T Consensus 126 ~~~~pg~~e~l~~L~~~g~~l~i~Tn~~~~~~~~~~~~~~~~ 167 (253)
T d1zs9a1 126 AEFFADVVPAVRKWREAGMKVYIYSSGSVEAQKLLFGHSTEG 167 (253)
T ss_dssp BCCCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHTBTTB
T ss_pred cccCCCHHHHHHHHhhccCceeecCCCcHHHHHHHHHHcCcc
Confidence 456899999999999999999999999999988888888874
|
| >d1swva_ c.108.1.3 (A:) Phosphonoacetaldehyde hydrolase {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphonoacetaldehyde hydrolase-like domain: Phosphonoacetaldehyde hydrolase species: Bacillus cereus [TaxId: 1396]
Probab=94.00 E-value=0.02 Score=59.34 Aligned_cols=41 Identities=12% Similarity=0.140 Sum_probs=38.4
Q ss_pred cCCchhHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCC
Q 001010 674 PIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIV 714 (1191)
Q Consensus 674 ~lK~da~~~I~~L~~agi~vvMiTGDn~~TA~~VA~~~gI~ 714 (1191)
++.|++.++++.|++.|+++.++||.+...+..+-+..|+.
T Consensus 99 ~~~~g~~~~L~~Lk~~g~~i~i~Tn~~~~~~~~~l~~~~l~ 139 (257)
T d1swva_ 99 SPINGVKEVIASLRERGIKIGSTTGYTREMMDIVAKEAALQ 139 (257)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEBCSSCHHHHHHHHHHHHHT
T ss_pred ccCCcHHHHHHHHHhcccceeecCCCchhhHHHHHHHHhhc
Confidence 57899999999999999999999999999999999999885
|
| >d2fi1a1 c.108.1.3 (A:4-190) Putative hydrolase SP0805 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphonoacetaldehyde hydrolase-like domain: Putative hydrolase SP0805 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=92.73 E-value=0.11 Score=50.81 Aligned_cols=40 Identities=10% Similarity=0.174 Sum_probs=33.3
Q ss_pred cCCchhHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCC
Q 001010 674 PIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIV 714 (1191)
Q Consensus 674 ~lK~da~~~I~~L~~agi~vvMiTGDn~~TA~~VA~~~gI~ 714 (1191)
++.|++++.++.|++.|+++.++|+-+.. +.++-+..|+.
T Consensus 79 ~~~~gv~~~l~~l~~~g~~~~i~Sn~~~~-~~~~l~~~~l~ 118 (187)
T d2fi1a1 79 ILFEGVSDLLEDISNQGGRHFLVSHRNDQ-VLEILEKTSIA 118 (187)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECSSCTH-HHHHHHHTTCG
T ss_pred cccchhHHHHHHHHhhhccccccccCccc-hhhhhhhhccc
Confidence 56799999999999999999999986654 44567788874
|
| >d1ltqa1 c.108.1.9 (A:153-301) Polynucleotide kinase, phosphatase domain {Bacteriophage T4 [TaxId: 10665]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: phosphatase domain of polynucleotide kinase domain: Polynucleotide kinase, phosphatase domain species: Bacteriophage T4 [TaxId: 10665]
Probab=92.63 E-value=0.04 Score=51.94 Aligned_cols=30 Identities=7% Similarity=0.096 Sum_probs=27.5
Q ss_pred cCcCCchhHHHHHHHHhcCCcEEEEcCCCH
Q 001010 672 NCPIREDSAKILSELKNSSQDLAMITGDQA 701 (1191)
Q Consensus 672 ~d~lK~da~~~I~~L~~agi~vvMiTGDn~ 701 (1191)
++++.|++.+.++.|++.|++++++||-+.
T Consensus 34 ~~~~~p~v~~~l~~l~~~G~~Iii~T~R~~ 63 (149)
T d1ltqa1 34 TDVINPMVVELSKMYALMGYQIVVVSGRES 63 (149)
T ss_dssp GCCBCHHHHHHHHHHHHTTCEEEEEECSCC
T ss_pred cCccCHHHHHHHHHHHhccCeEEEEecCcH
Confidence 567899999999999999999999999863
|
| >d1x42a1 c.108.1.1 (A:1-230) Hypothetical protein PH0459 {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: Hypothetical protein PH0459 species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=92.10 E-value=0.19 Score=50.57 Aligned_cols=41 Identities=17% Similarity=0.171 Sum_probs=36.4
Q ss_pred CcCCchhHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCC
Q 001010 673 CPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIV 714 (1191)
Q Consensus 673 d~lK~da~~~I~~L~~agi~vvMiTGDn~~TA~~VA~~~gI~ 714 (1191)
.++.||+.++++.|+ .|+++.++|+........+.+.+|+.
T Consensus 99 ~~~~p~~~~~L~~l~-~~~~i~i~Sn~~~~~~~~~l~~~gl~ 139 (230)
T d1x42a1 99 GELYPEVVEVLKSLK-GKYHVGMITDSDTEYLMAHLDALGIK 139 (230)
T ss_dssp CCBCTTHHHHHHHHB-TTBEEEEEESSCHHHHHHHHHHHTCG
T ss_pred CcccccHHHHHHHhh-ccCceeeeeccccccchhhhcccccc
Confidence 356899999999997 57999999999999999999999984
|
| >d2gfha1 c.108.1.6 (A:1-247) N-acylneuraminate-9-phosphatase NANP {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: N-acylneuraminate-9-phosphatase NANP species: Mouse (Mus musculus) [TaxId: 10090]
Probab=89.32 E-value=0.43 Score=48.20 Aligned_cols=40 Identities=18% Similarity=0.204 Sum_probs=36.1
Q ss_pred cCCchhHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCC
Q 001010 674 PIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIV 714 (1191)
Q Consensus 674 ~lK~da~~~I~~L~~agi~vvMiTGDn~~TA~~VA~~~gI~ 714 (1191)
++.|++.++++.|++ ++++.++|+.+.......-+.+|+.
T Consensus 109 ~~~~~~~~~L~~L~~-~~~l~i~Tn~~~~~~~~~l~~~gl~ 148 (247)
T d2gfha1 109 ILADDVKAMLTELRK-EVRLLLLTNGDRQTQREKIEACACQ 148 (247)
T ss_dssp CCCHHHHHHHHHHHT-TSEEEEEECSCHHHHHHHHHHHTCG
T ss_pred ccCccHHHHHHHhhc-ccceEEeecccchhhhhhhhhcccc
Confidence 567999999999985 8999999999999999999999985
|
| >d1o08a_ c.108.1.6 (A:) beta-Phosphoglucomutase {Lactococcus lactis [TaxId: 1358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: beta-Phosphoglucomutase species: Lactococcus lactis [TaxId: 1358]
Probab=88.90 E-value=0.16 Score=50.57 Aligned_cols=40 Identities=8% Similarity=0.312 Sum_probs=34.0
Q ss_pred CcCCchhHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCC
Q 001010 673 CPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIV 714 (1191)
Q Consensus 673 d~lK~da~~~I~~L~~agi~vvMiTGDn~~TA~~VA~~~gI~ 714 (1191)
.++-|++.+.++.|++.|+++.++|+.+. +..+-+..|+.
T Consensus 90 ~~~~~g~~~~l~~l~~~~~~i~i~s~~~~--~~~~l~~~~l~ 129 (221)
T d1o08a_ 90 ADVYPGILQLLKDLRSNKIKIALASASKN--GPFLLERMNLT 129 (221)
T ss_dssp GGBCTTHHHHHHHHHHTTCEEEECCSCTT--HHHHHHHTTCG
T ss_pred ccccCCceeccccccccccceEEEeecch--hhHHHHhhccc
Confidence 45678999999999999999999999764 56777888875
|
| >d1yv9a1 c.108.1.14 (A:4-256) Putative hydrolase EF1188 {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Putative hydrolase EF1188 species: Enterococcus faecalis [TaxId: 1351]
Probab=87.66 E-value=0.45 Score=48.64 Aligned_cols=35 Identities=11% Similarity=0.243 Sum_probs=31.3
Q ss_pred chhHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHc
Q 001010 677 EDSAKILSELKNSSQDLAMITGDQALTACYVASQV 711 (1191)
Q Consensus 677 ~da~~~I~~L~~agi~vvMiTGDn~~TA~~VA~~~ 711 (1191)
|++.++|++|+++|++++.+|+....+...+++++
T Consensus 21 ~~a~~~i~~l~~~g~~~~~~Tn~s~~~~~~~~~~L 55 (253)
T d1yv9a1 21 PAGKRFVERLQEKDLPFLFVTNNTTKSPETVAQRL 55 (253)
T ss_dssp HHHHHHHHHHHHTTCCEEEEECCCSSCHHHHHHHH
T ss_pred ccHHHHHHHHHHCCCCEEEEeCCCCCCHHHHHHHH
Confidence 78999999999999999999998888888877764
|
| >d2gmwa1 c.108.1.19 (A:24-205) D,D-heptose 1,7-bisphosphate phosphatase GmhB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: D,D-heptose 1,7-bisphosphate phosphatase GmhB species: Escherichia coli [TaxId: 562]
Probab=87.21 E-value=0.48 Score=46.11 Aligned_cols=27 Identities=19% Similarity=0.284 Sum_probs=24.2
Q ss_pred CCchhHHHHHHHHhcCCcEEEEcCCCH
Q 001010 675 IREDSAKILSELKNSSQDLAMITGDQA 701 (1191)
Q Consensus 675 lK~da~~~I~~L~~agi~vvMiTGDn~ 701 (1191)
+-|++.++++.|+++|++++++|....
T Consensus 28 ~~~gv~e~l~~L~~~g~~~~ivTNq~~ 54 (182)
T d2gmwa1 28 FIDGVIDAMRELKKMGFALVVVTNQSG 54 (182)
T ss_dssp BCTTHHHHHHHHHHTTCEEEEEEECTH
T ss_pred ECCCHHHHHHHHhhcCchhhhhhccch
Confidence 448999999999999999999998763
|
| >d2b82a1 c.108.1.12 (A:4-212) Class B acid phosphatase, AphA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Class B acid phosphatase, AphA domain: Class B acid phosphatase, AphA species: Escherichia coli [TaxId: 562]
Probab=85.86 E-value=0.29 Score=48.99 Aligned_cols=40 Identities=15% Similarity=0.230 Sum_probs=34.0
Q ss_pred CCchhHHHHHHHHhcCCcEEEEcCCC----HHHHHHHHHHcCCC
Q 001010 675 IREDSAKILSELKNSSQDLAMITGDQ----ALTACYVASQVHIV 714 (1191)
Q Consensus 675 lK~da~~~I~~L~~agi~vvMiTGDn----~~TA~~VA~~~gI~ 714 (1191)
+.|++.+.++.+++.|++++-|||.. ..|+.+.-+.+|+.
T Consensus 87 p~pga~~fl~~~~~~Gv~IfyVTnR~~~~~e~T~~nL~K~lG~p 130 (209)
T d2b82a1 87 PKEVARQLIDMHVRRGDAIFFVTGRSPTKTETVSKTLADNFHIP 130 (209)
T ss_dssp ECHHHHHHHHHHHHHTCEEEEEECSCCCSSCCHHHHHHHHTTCC
T ss_pred cchhHHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHHHHHcCCC
Confidence 57899999999999999999999974 35667777778885
|
| >d2o2xa1 c.108.1.19 (A:8-216) Hypothetical protein Mll2559 {Mesorhizobium loti [TaxId: 381]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: Hypothetical protein Mll2559 species: Mesorhizobium loti [TaxId: 381]
Probab=85.23 E-value=0.39 Score=48.19 Aligned_cols=25 Identities=8% Similarity=0.191 Sum_probs=23.0
Q ss_pred cCCchhHHHHHHHHhcCCcEEEEcC
Q 001010 674 PIREDSAKILSELKNSSQDLAMITG 698 (1191)
Q Consensus 674 ~lK~da~~~I~~L~~agi~vvMiTG 698 (1191)
.+-|++.++|+.|+++|+++.++|-
T Consensus 48 ~l~pgv~e~L~~L~~~G~~l~IvTN 72 (209)
T d2o2xa1 48 VLRPQMLPAIATANRAGIPVVVVTN 72 (209)
T ss_dssp CBCGGGHHHHHHHHHHTCCEEEEEE
T ss_pred EecccHHHHHHHHHhhCCeEEEecc
Confidence 4679999999999999999999994
|
| >d1zrna_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., strain YL [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: L-2-Haloacid dehalogenase, HAD species: Pseudomonas sp., strain YL [TaxId: 306]
Probab=85.20 E-value=1.2 Score=43.63 Aligned_cols=43 Identities=19% Similarity=0.176 Sum_probs=37.9
Q ss_pred cCcCCchhHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCC
Q 001010 672 NCPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIV 714 (1191)
Q Consensus 672 ~d~lK~da~~~I~~L~~agi~vvMiTGDn~~TA~~VA~~~gI~ 714 (1191)
...+.+++.++++.|++.++++.++|+-+.......-+..++.
T Consensus 91 ~~~~~~~~~~~l~~l~~~~~~~~i~tn~~~~~~~~~~~~~~~~ 133 (220)
T d1zrna_ 91 RLAPFSEVPDSLRELKRRGLKLAILSNGSPQSIDAVVSHAGLR 133 (220)
T ss_dssp GCEECTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCG
T ss_pred cccccchhHHHHHHHHhcCCeEEeecchHHHHHHHHHhhcccc
Confidence 3456789999999999999999999999999998888887775
|
| >d1cr6a1 c.108.1.2 (A:4-225) Epoxide hydrolase, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Epoxide hydrolase, N-terminal domain species: Mouse (Mus musculus) [TaxId: 10090]
Probab=83.92 E-value=0.46 Score=46.87 Aligned_cols=100 Identities=13% Similarity=0.143 Sum_probs=61.9
Q ss_pred CcCCchhHHHHHHHHhcCCcEEEEcCCC----HHHHHHHHHHcCCCCCCcEEEeecCCCceeeecCCCccccccCChHHH
Q 001010 673 CPIREDSAKILSELKNSSQDLAMITGDQ----ALTACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEV 748 (1191)
Q Consensus 673 d~lK~da~~~I~~L~~agi~vvMiTGDn----~~TA~~VA~~~gI~~~~~~il~~~~~~~~~~w~~~d~~~~~~~~~~~~ 748 (1191)
..+.|++.+.++.|++.|+++.++|+-. ...........|+.+
T Consensus 96 ~~~~~~~~~~L~~L~~~~~~~~i~s~~~~~~~~~~~~~~~~~~~l~~--------------------------------- 142 (222)
T d1cr6a1 96 RSINRPMLQAAIALKKKGFTTCIVTNNWLDDGDKRDSLAQMMCELSQ--------------------------------- 142 (222)
T ss_dssp CEECHHHHHHHHHHHHTTCEEEEEECCCCCCSSSHHHHHHHHHHHGG---------------------------------
T ss_pred CCCCccHHHHHHHHHhcCCceEEeeccccccHHHHHHHHHHhcChHh---------------------------------
Confidence 3567999999999999999999999632 223333344444421
Q ss_pred hcccccceEEEechhhhhhcchHHHHhhcCcceEEeecChhhHHHHHHHHhHcCCEEEEEcCCccCHHHHhhCCc-eEEe
Q 001010 749 EGLTDAHDLCIGGDCFEMLQQTSAVLRVIPYVKVFARVAPEQKELILTTFKAVGRMTLMCGDGTNDVGALKQAHV-GVAL 827 (1191)
Q Consensus 749 ~~~~~~~~l~itG~~l~~l~~~~~~~~~l~~~~VfAR~sP~qK~~iV~~Lq~~g~~V~m~GDG~ND~~ALk~AdV-GIAl 827 (1191)
-++.+++++.... ..=.|+--..+++.++-.-..++|+||..+|+.+-++|++ +|-+
T Consensus 143 -----~fd~i~~s~~~~~-----------------~KP~p~~~~~~~~~~~v~p~~~l~IgD~~~Di~~A~~aG~~ti~V 200 (222)
T d1cr6a1 143 -----HFDFLIESCQVGM-----------------IKPEPQIYNFLLDTLKAKPNEVVFLDDFGSNLKPARDMGMVTILV 200 (222)
T ss_dssp -----GCSEEEEHHHHSC-----------------CTTCHHHHHHHHHHHTSCTTSEEEEESSSTTTHHHHHHTCEEEEC
T ss_pred -----hhceeeehhhccC-----------------CCCChHHHHHHHHHhCCCcceEEEEECCHHHHHHHHHcCCEEEEE
Confidence 1223333322110 1112443445555555455679999999999999999997 4443
|
| >d2b8ea2 d.220.1.1 (A:435-547) Cation-transporting ATPase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Cation-transporting ATPase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=81.82 E-value=2.1 Score=38.16 Aligned_cols=39 Identities=10% Similarity=0.116 Sum_probs=35.4
Q ss_pred EEeCcHHHHHHhccCChHHHHHHHHHHHHhcCeeeeEEE
Q 001010 602 FVKGAPETIQDRLTDLPSSYIETYKKYTHQGSRVLALAF 640 (1191)
Q Consensus 602 ~~KGapE~I~~~~~~~p~~~~~~~~~~a~~G~RVLalA~ 640 (1191)
+.-|+++.+.+....+|+.+.+....+..+|..++.++.
T Consensus 64 v~vG~~~~~~~~~~~~~~~~~~~~~~~~~~G~T~v~va~ 102 (113)
T d2b8ea2 64 ILVGNKRLMEDFGVAVSNEVELALEKLEREAKTAVIVAR 102 (113)
T ss_dssp EEEECHHHHHHTTCCCCHHHHHHHHHHHTTTCEEEEEEE
T ss_pred EEECcHHHHHhcCCCCCHHHHHHHHHHHhCCCeEEEEEE
Confidence 345999999998888999999999999999999999995
|
| >d1zd3a1 c.108.1.2 (A:2-224) Epoxide hydrolase, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Epoxide hydrolase, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=80.81 E-value=0.39 Score=47.10 Aligned_cols=30 Identities=13% Similarity=0.036 Sum_probs=25.7
Q ss_pred cCCchhHHHHHHHHhcCCcEEEEcCCCHHH
Q 001010 674 PIREDSAKILSELKNSSQDLAMITGDQALT 703 (1191)
Q Consensus 674 ~lK~da~~~I~~L~~agi~vvMiTGDn~~T 703 (1191)
.+.+++.+.++.|++.|+++.++|+.....
T Consensus 99 ~~~~~~~~~l~~L~~~~~~~~i~Tn~~~~~ 128 (225)
T d1zd3a1 99 KINRPMLQAALMLRKKGFTTAILTNTWLDD 128 (225)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEECCCCCC
T ss_pred CCCccHHHHHHHHHhccCccccccccchhh
Confidence 468999999999999999999999765443
|