BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 001014
         (1190 letters)

Database: nr 
           23,463,169 sequences; 8,064,228,071 total letters

Searching..................................................done



>gi|255570773|ref|XP_002526339.1| ATP binding protein, putative [Ricinus communis]
 gi|223534298|gb|EEF36010.1| ATP binding protein, putative [Ricinus communis]
          Length = 1197

 Score = 2063 bits (5344), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 991/1197 (82%), Positives = 1084/1197 (90%), Gaps = 10/1197 (0%)

Query: 1    MSYCLNHCKNLSPSSFLAQK-PSFP-LTRHIDFRSFLYSNKKTGSLSLRSWPPQ-----L 53
            M+ CLNHC+ LS +S    K P+ P L+R   F  F Y N    SL+L  WPP+     L
Sbjct: 1    MATCLNHCETLSSTSIFPNKSPTLPRLSRRRSFGLFSYKNYNFSSLNLHPWPPRRTTRHL 60

Query: 54   TRYSRSRVRASSAKIDSSAELSNGAASSKDQ--KLGKRTDLRKILILGAGPIVIGQACEF 111
             R S + VR SS  +  S+ +S+    +  +   +GKRTD++KI+ILGAGPIVIGQACEF
Sbjct: 61   KRCSSNSVRCSSNSVRCSS-ISDVTVKTLTEAPNVGKRTDIKKIMILGAGPIVIGQACEF 119

Query: 112  DYSGTQACKALKEEGYEVILINSNPATIMTDPGLADRTYITPMTPELVEQVLEKERPDAL 171
            DYSGTQACKALKEEGY+VILINSNPATIMTDP LADRTYI PMTPELVEQV+EKERPDAL
Sbjct: 120  DYSGTQACKALKEEGYDVILINSNPATIMTDPDLADRTYIAPMTPELVEQVIEKERPDAL 179

Query: 172  LPTMGGQTALNLAVALAESGALEKYGVELIGAKLDAIKKAEDRDLFKQAMKTIGVKTPPS 231
            LPTMGGQTALNLAVALAE G L+KY VELIGAKLDAIKKAEDRDLFKQAMK IG+KTPPS
Sbjct: 180  LPTMGGQTALNLAVALAERGTLDKYNVELIGAKLDAIKKAEDRDLFKQAMKNIGLKTPPS 239

Query: 232  GIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGIAYNKEEFEAICKAGLAASLTSQVL 291
            GIG T+DEC  IAN+IGEFPLIIRPAFTLGGTGGGIAYN EEFE ICK GLA SLTSQVL
Sbjct: 240  GIGTTIDECFQIANDIGEFPLIIRPAFTLGGTGGGIAYNIEEFEGICKGGLAESLTSQVL 299

Query: 292  VEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMGVHTGDSITVAPAQTLTDKEYQRLR 351
            VEKSLLGWKEYELEVMRDLADNVVIICSIEN DPMGVHTGDSITVAPAQTLTDKEYQRLR
Sbjct: 300  VEKSLLGWKEYELEVMRDLADNVVIICSIENFDPMGVHTGDSITVAPAQTLTDKEYQRLR 359

Query: 352  DYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMNPRVSRSSALASKATGFPIAKMAAK 411
            DYSI IIREIGVECGGSNVQFAVNPVDGEVM+IEMNPRVSRSSALASKATGFPIAKMAAK
Sbjct: 360  DYSIKIIREIGVECGGSNVQFAVNPVDGEVMIIEMNPRVSRSSALASKATGFPIAKMAAK 419

Query: 412  LSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRFAFEKFPGSEPLLTTQMKSVGEAMA 471
            LSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRFAFEKFPGS+P+LTT+M+SVGEAM+
Sbjct: 420  LSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRFAFEKFPGSQPILTTRMQSVGEAMS 479

Query: 472  LGRTFQESFQKALRSLECGFSGWGCSNVKELDWDWEQLKYSLRVPNPDRMQAIYAAMKKG 531
            +GRTFQESFQK +RSLE G+SGWGC+ VKELDWDW+QLKY+LRVPNPDR+ A+YAAMKKG
Sbjct: 480  IGRTFQESFQKGVRSLESGYSGWGCAKVKELDWDWDQLKYNLRVPNPDRIYAVYAAMKKG 539

Query: 532  MKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSVSNMTKDDFYEVKRRGFSDKQIAFAT 591
            MKVDEIHELS IDKWFL Q KEL+DVEQ+L+T+S+++M KDDFYE+K+RGFSDKQIAFAT
Sbjct: 540  MKVDEIHELSLIDKWFLNQLKELVDVEQYLMTRSLADMIKDDFYEIKKRGFSDKQIAFAT 599

Query: 592  KSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTPYMYSSYDFECESAPTQKKKVLILGG 651
            KSTEKEVR KRLS GV P+YKRVDTCAAEFEANTPYMYSSYD ECESAPT KKKVLILGG
Sbjct: 600  KSTEKEVRSKRLSFGVTPAYKRVDTCAAEFEANTPYMYSSYDAECESAPTNKKKVLILGG 659

Query: 652  GPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSNPETVSTDYDTSDRLYFEPLTVEDVL 711
            GPNRIGQGIEFDYCCCHTSF+LQSAGYETIMMNSNPETVSTDYDTSDRLYFEPLTVEDV+
Sbjct: 660  GPNRIGQGIEFDYCCCHTSFALQSAGYETIMMNSNPETVSTDYDTSDRLYFEPLTVEDVV 719

Query: 712  NVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHRLPSASGDGLVRIWGTSPDSIDAAED 771
            NVIDLERP+GIIVQFGGQTPLKL+LPI QYLDEH+  SASG G VRIWGTSPDSIDAAED
Sbjct: 720  NVIDLERPDGIIVQFGGQTPLKLALPIQQYLDEHKPVSASGAGHVRIWGTSPDSIDAAED 779

Query: 772  RERFNAIIKELSIEQPKGGIAKSEADALAIAKEIGYPVVVRPSYVLGGRAMEIVYTDETL 831
            RERFNAI+KEL IEQPKGGIAK+EADAL IAK+IGYPVVVRPSYVLGGRAMEIVY+DE L
Sbjct: 780  RERFNAIVKELQIEQPKGGIAKTEADALTIAKDIGYPVVVRPSYVLGGRAMEIVYSDEKL 839

Query: 832  VTYLENAVEVDPERPVLIDKYLSDAIEIDVDALADSCGNVVIGGIMEHIEQAGVHSGDSA 891
            VTYLENAV+VDP+RPVLIDKYLSDA+EIDVDALADS GNVVIGG+MEHIEQAGVHSGDSA
Sbjct: 840  VTYLENAVKVDPDRPVLIDKYLSDAVEIDVDALADSHGNVVIGGVMEHIEQAGVHSGDSA 899

Query: 892  CMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNCQYAITTSGDVYLLEANPRASRTVPF 951
            C++PT+TISSSCLDTI SWT+KLAK L VCGLMNCQYAIT +G+V+LLEANPRASRTVPF
Sbjct: 900  CILPTQTISSSCLDTIRSWTMKLAKSLKVCGLMNCQYAITLAGEVFLLEANPRASRTVPF 959

Query: 952  VSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPKHVSVKEAVLPFEKFQGCDVLLGPEMR 1011
            VSKAIGHPLAKYA+LVMSG SLN+LGFTKEVIP HV+VKE VLPF KF GCDV+LGPEMR
Sbjct: 960  VSKAIGHPLAKYASLVMSGISLNELGFTKEVIPAHVAVKEVVLPFNKFPGCDVMLGPEMR 1019

Query: 1012 STGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVFLSLNDLTKPHLERIAKAFLDIGFKIV 1071
            STGE MGID + PIA+AK QIA GQKLPLSGT F+SLNDLTKPHLE++A AFL++GF+I+
Sbjct: 1020 STGEGMGIDFALPIAYAKGQIATGQKLPLSGTAFISLNDLTKPHLEKLANAFLELGFRII 1079

Query: 1072 STSGTAHFLELKGIAVERVLKMHEGRPHAGDMVANGQIQMMVITSSGDSLDQIDGLKLRR 1131
            STSGTAHFLELKGI VERVLKMHEGRPHAGDM+ANGQIQ+MV+TSSGDSLDQIDGL+LRR
Sbjct: 1080 STSGTAHFLELKGIPVERVLKMHEGRPHAGDMLANGQIQLMVMTSSGDSLDQIDGLQLRR 1139

Query: 1132 RGLAYKVPVITTVSGALANAEAIRSLKSNTVTMTALQDFFDVETASGSSENLQSVST 1188
              LAYKVP+ITTV+GALA AEAI+SL+S  + M ALQDFFDVE    SS++LQS S+
Sbjct: 1140 MALAYKVPIITTVAGALATAEAIKSLRSCPIDMIALQDFFDVEIREESSKHLQSASS 1196


>gi|225435213|ref|XP_002282042.1| PREDICTED: carbamoyl-phosphate synthase large chain-like [Vitis
            vinifera]
          Length = 1349

 Score = 2058 bits (5331), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 1001/1197 (83%), Positives = 1092/1197 (91%), Gaps = 22/1197 (1%)

Query: 1    MSYCLNHCKNLSPSSFLAQKPSFPLTRHID----FRSFLYSNK-KTGSLSLRSWPPQLTR 55
            M +C+NH     P++F  +  S  L  +      FR F Y N+ +TGS        +L  
Sbjct: 1    MGFCMNH-----PATFSGRSISSSLNPYSSNPTCFRIFFYPNQLRTGS--------RLVG 47

Query: 56   YSR--SRVRASSAKIDSS--AELSNGAASSKDQKLGKRTDLRKILILGAGPIVIGQACEF 111
             +R  SRVRAS  + +    ++ +NG A+      GKRTDL+KI+ILGAGPIVIGQACEF
Sbjct: 48   LARLASRVRASPVRAEKGVGSDSTNGTAAFGGAPAGKRTDLKKIMILGAGPIVIGQACEF 107

Query: 112  DYSGTQACKALKEEGYEVILINSNPATIMTDPGLADRTYITPMTPELVEQVLEKERPDAL 171
            DYSGTQACKALKEEGYEV+LINSNPATIMTDP +AD+TYITPMTPELVEQVLEKERPDA+
Sbjct: 108  DYSGTQACKALKEEGYEVVLINSNPATIMTDPDMADKTYITPMTPELVEQVLEKERPDAI 167

Query: 172  LPTMGGQTALNLAVALAESGALEKYGVELIGAKLDAIKKAEDRDLFKQAMKTIGVKTPPS 231
            LPTMGGQTALNLAVALAESG LEKYGVELIGAKL+AIKKAEDR+LFKQAM+ IGVKTPPS
Sbjct: 168  LPTMGGQTALNLAVALAESGVLEKYGVELIGAKLEAIKKAEDRELFKQAMENIGVKTPPS 227

Query: 232  GIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGIAYNKEEFEAICKAGLAASLTSQVL 291
            GIG TLDEC+ IAN IGEFPLIIRPAFTLGGTGGGIAYN+EEFEAICK+GLAASLTSQVL
Sbjct: 228  GIGTTLDECMEIANSIGEFPLIIRPAFTLGGTGGGIAYNREEFEAICKSGLAASLTSQVL 287

Query: 292  VEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMGVHTGDSITVAPAQTLTDKEYQRLR 351
            VEKSLLGWKEYELEVMRDLADNVVIICSIEN+DPMGVHTGDSITVAPAQTLTDKEYQRLR
Sbjct: 288  VEKSLLGWKEYELEVMRDLADNVVIICSIENIDPMGVHTGDSITVAPAQTLTDKEYQRLR 347

Query: 352  DYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMNPRVSRSSALASKATGFPIAKMAAK 411
            DYS+AIIREIGVECGGSNVQFAVNPVDGEVMVIEMNPRVSRSSALASKATGFPIAKMAAK
Sbjct: 348  DYSVAIIREIGVECGGSNVQFAVNPVDGEVMVIEMNPRVSRSSALASKATGFPIAKMAAK 407

Query: 412  LSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRFAFEKFPGSEPLLTTQMKSVGEAMA 471
            LSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRFAFEKFPGS+P+LTTQMKSVGE+MA
Sbjct: 408  LSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRFAFEKFPGSQPILTTQMKSVGESMA 467

Query: 472  LGRTFQESFQKALRSLECGFSGWGCSNVKELDWDWEQLKYSLRVPNPDRMQAIYAAMKKG 531
            LGRTFQESFQKA+RSLECG+SGWGC+ +KE+DWDWEQLKYSLRVPNPDR+ AIYAAMKKG
Sbjct: 468  LGRTFQESFQKAVRSLECGYSGWGCAQLKEMDWDWEQLKYSLRVPNPDRIHAIYAAMKKG 527

Query: 532  MKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSVSNMTKDDFYEVKRRGFSDKQIAFAT 591
            MKVD+IHELSFIDKWFLTQ KEL+DVEQFLL++S+S+++KDDFYEVKRRGFSDKQIAFA+
Sbjct: 528  MKVDDIHELSFIDKWFLTQLKELVDVEQFLLSRSLSDLSKDDFYEVKRRGFSDKQIAFAS 587

Query: 592  KSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTPYMYSSYDFECESAPTQKKKVLILGG 651
            KSTEKEVR KRLSLGV P+YKRVDTCAAEFEANTPYMYSSYDFECESAPTQ+KKVLILGG
Sbjct: 588  KSTEKEVRLKRLSLGVTPAYKRVDTCAAEFEANTPYMYSSYDFECESAPTQRKKVLILGG 647

Query: 652  GPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSNPETVSTDYDTSDRLYFEPLTVEDVL 711
            GPNRIGQGIEFDYCCCHTSF+LQ AGYETIMMNSNPETVSTDYDTSDRLYFEPLTVEDVL
Sbjct: 648  GPNRIGQGIEFDYCCCHTSFALQKAGYETIMMNSNPETVSTDYDTSDRLYFEPLTVEDVL 707

Query: 712  NVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHRLPSASGDGLVRIWGTSPDSIDAAED 771
            N+IDLE+P+GIIVQFGGQTPLKL+LPI  YLDEHR  SASG G VRIWGTSPDSIDAAE+
Sbjct: 708  NIIDLEQPDGIIVQFGGQTPLKLALPIQNYLDEHRPLSASGVGHVRIWGTSPDSIDAAEN 767

Query: 772  RERFNAIIKELSIEQPKGGIAKSEADALAIAKEIGYPVVVRPSYVLGGRAMEIVYTDETL 831
            RERFNAI+ +L IEQPKGGIAKSEADALAIA +IGYPVVVRPSYVLGGRAMEIVY+D+ L
Sbjct: 768  RERFNAILNDLKIEQPKGGIAKSEADALAIAMDIGYPVVVRPSYVLGGRAMEIVYSDDKL 827

Query: 832  VTYLENAVEVDPERPVLIDKYLSDAIEIDVDALADSCGNVVIGGIMEHIEQAGVHSGDSA 891
            VTYLENAVEVDPERPVLID+YLSDAIEIDVDALADS GNVVIGGIMEHIEQAGVHSGDSA
Sbjct: 828  VTYLENAVEVDPERPVLIDRYLSDAIEIDVDALADSEGNVVIGGIMEHIEQAGVHSGDSA 887

Query: 892  CMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNCQYAITTSGDVYLLEANPRASRTVPF 951
            C +PTKTI SSCLDTI SWT  LAK+LNVCGLMNCQYAIT SG V+LLEANPRASRTVPF
Sbjct: 888  CSLPTKTIPSSCLDTIRSWTTILAKKLNVCGLMNCQYAITASGSVFLLEANPRASRTVPF 947

Query: 952  VSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPKHVSVKEAVLPFEKFQGCDVLLGPEMR 1011
            VSKAIGHPLAKYA+LVMSGKSL+DL FTKEVIP+HVSVKEAVLPFEKFQGCDVLLGPEMR
Sbjct: 948  VSKAIGHPLAKYASLVMSGKSLHDLCFTKEVIPRHVSVKEAVLPFEKFQGCDVLLGPEMR 1007

Query: 1012 STGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVFLSLNDLTKPHLERIAKAFLDIGFKIV 1071
            STGEVMGID  FP+AFAKAQIAAGQKLP+SGTVFLSLNDLTKPHL  IA++F+ +GF+IV
Sbjct: 1008 STGEVMGIDFEFPVAFAKAQIAAGQKLPVSGTVFLSLNDLTKPHLATIARSFIGLGFRIV 1067

Query: 1072 STSGTAHFLELKGIAVERVLKMHEGRPHAGDMVANGQIQMMVITSSGDSLDQIDGLKLRR 1131
            STSGTAH LEL+GI VERVLKMHEGRPHAGDM+ANGQIQ+MVITSSGD+ DQIDG +LRR
Sbjct: 1068 STSGTAHVLELEGIPVERVLKMHEGRPHAGDMIANGQIQLMVITSSGDTHDQIDGRQLRR 1127

Query: 1132 RGLAYKVPVITTVSGALANAEAIRSLKSNTVTMTALQDFFDVETASGSSENLQSVST 1188
              LAYKVP+ITTV+GA A+ EAI+SLK   + M ALQDFFD+E+   S++N+QS S+
Sbjct: 1128 MALAYKVPIITTVAGASASVEAIKSLKCCAIKMIALQDFFDIESEKESTKNVQSASS 1184


>gi|449444004|ref|XP_004139765.1| PREDICTED: carbamoyl-phosphate synthase large chain-like [Cucumis
            sativus]
          Length = 1192

 Score = 2053 bits (5320), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 994/1192 (83%), Positives = 1079/1192 (90%), Gaps = 6/1192 (0%)

Query: 1    MSYCLNHCKNLSPSSFLAQKPS---FPLTRHID--FRSFLYSNKKTGSLSLRSWPPQLTR 55
            M YCL   ++L+  SFL+   S   FP +   +    +F     + GS SL   P     
Sbjct: 1    MGYCLIPSQSLTAKSFLSPSSSISRFPASSFSNPTLANFFSYTTRLGSSSLNIHPCHHRL 60

Query: 56   YSRSRVRASSAKIDSSAELSNGAASSKDQKLGKRTDLRKILILGAGPIVIGQACEFDYSG 115
                ++      +       N     K  K+GKRTDL+KI+ILGAGPIVIGQACEFDYSG
Sbjct: 61   SPFGKLYTQKGLVRCLKNDENPIKEVKAGKIGKRTDLKKIMILGAGPIVIGQACEFDYSG 120

Query: 116  TQACKALKEEGYEVILINSNPATIMTDPGLADRTYITPMTPELVEQVLEKERPDALLPTM 175
            TQACKALKEEGYEV+LINSNPATIMTDP LADRTY+TPMTPELVE+VLEKERPDALLPTM
Sbjct: 121  TQACKALKEEGYEVVLINSNPATIMTDPELADRTYVTPMTPELVEKVLEKERPDALLPTM 180

Query: 176  GGQTALNLAVALAESGALEKYGVELIGAKLDAIKKAEDRDLFKQAMKTIGVKTPPSGIGN 235
            GGQTALNLAVALAESGALEKYG+ELIGAKLDAIKKAEDR+LFKQAMK IG+KTPPSGIG 
Sbjct: 181  GGQTALNLAVALAESGALEKYGIELIGAKLDAIKKAEDRELFKQAMKNIGIKTPPSGIGT 240

Query: 236  TLDECISIANEIGEFPLIIRPAFTLGGTGGGIAYNKEEFEAICKAGLAASLTSQVLVEKS 295
            TL+ECI IA EIGEFPLIIRPAFTLGGTGGGIAYNKEEFE+ICKAGLAASLTSQVLVEKS
Sbjct: 241  TLEECIEIAGEIGEFPLIIRPAFTLGGTGGGIAYNKEEFESICKAGLAASLTSQVLVEKS 300

Query: 296  LLGWKEYELEVMRDLADNVVIICSIENVDPMGVHTGDSITVAPAQTLTDKEYQRLRDYSI 355
            LLGWKEYELEVMRDLADNVVIICSIEN+DPMGVHTGDSITVAPAQTLTDKEYQRLRDYSI
Sbjct: 301  LLGWKEYELEVMRDLADNVVIICSIENIDPMGVHTGDSITVAPAQTLTDKEYQRLRDYSI 360

Query: 356  AIIREIGVECGGSNVQFAVNPVDGEVMVIEMNPRVSRSSALASKATGFPIAKMAAKLSVG 415
            AIIREIGVECGGSNVQFAVNP DGEVMVIEMNPRVSRSSALASKATGFPIAKMAAKLS+G
Sbjct: 361  AIIREIGVECGGSNVQFAVNPADGEVMVIEMNPRVSRSSALASKATGFPIAKMAAKLSIG 420

Query: 416  YSLDQIPNDITKKTPASFEPSIDYVVTKIPRFAFEKFPGSEPLLTTQMKSVGEAMALGRT 475
            YSLDQIPNDITKKTPASFEPSIDYVVTKIPRFAFEKFPGS+P+LTTQMKSVGEAMALGRT
Sbjct: 421  YSLDQIPNDITKKTPASFEPSIDYVVTKIPRFAFEKFPGSQPILTTQMKSVGEAMALGRT 480

Query: 476  FQESFQKALRSLECGFSGWGCSNVKELDWDWEQLKYSLRVPNPDRMQAIYAAMKKGMKVD 535
            FQESFQKA+RSLECG+SGWGC  +K+LDWDWEQLKYSLRVPNPDR+ A+YAAMKKGMK+D
Sbjct: 481  FQESFQKAVRSLECGYSGWGCEPIKQLDWDWEQLKYSLRVPNPDRIHAVYAAMKKGMKLD 540

Query: 536  EIHELSFIDKWFLTQFKELIDVEQFLLTQSVSNMTKDDFYEVKRRGFSDKQIAFATKSTE 595
            +IHELS+IDKWFLTQ KEL+DVEQ+LL Q +SN+TK+DFYEVK+RGFSDKQIAFATKSTE
Sbjct: 541  DIHELSYIDKWFLTQLKELVDVEQYLLAQHLSNLTKEDFYEVKKRGFSDKQIAFATKSTE 600

Query: 596  KEVREKRLSLGVIPSYKRVDTCAAEFEANTPYMYSSYDFECESAPTQKKKVLILGGGPNR 655
             EVR KR+SLGV P+YKRVDTCAAEFEANTPYMYSSYDFECESAPTQKKKVLILGGGPNR
Sbjct: 601  NEVRSKRISLGVFPAYKRVDTCAAEFEANTPYMYSSYDFECESAPTQKKKVLILGGGPNR 660

Query: 656  IGQGIEFDYCCCHTSFSLQSAGYETIMMNSNPETVSTDYDTSDRLYFEPLTVEDVLNVID 715
            IGQGIEFDYCCCHTSF+LQ AGYETIMMNSNPETVSTDYDTSDRLYFEPLT+EDV NVID
Sbjct: 661  IGQGIEFDYCCCHTSFALQDAGYETIMMNSNPETVSTDYDTSDRLYFEPLTIEDVFNVID 720

Query: 716  LERPEGIIVQFGGQTPLKLSLPIHQYLDEHRLPSASGDGLVRIWGTSPDSIDAAEDRERF 775
            LERP+GIIVQFGGQTPLKL+LPI +YLDE +L SASGDG VRIWGTSPDSIDAAEDRERF
Sbjct: 721  LERPDGIIVQFGGQTPLKLALPIQRYLDETKLISASGDGHVRIWGTSPDSIDAAEDRERF 780

Query: 776  NAIIKELSIEQPKGGIAKSEADALAIAKEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYL 835
            NAI+ EL IEQP+GGIAKSEADAL+IAK+IGYPVVVRPSYVLGGRAMEIVY+D+ LVTYL
Sbjct: 781  NAILNELKIEQPRGGIAKSEADALSIAKDIGYPVVVRPSYVLGGRAMEIVYSDDKLVTYL 840

Query: 836  ENAVEVDPERPVLIDKYLSDAIEIDVDALADSCGNVVIGGIMEHIEQAGVHSGDSACMIP 895
            ENAVEVDPERPVL+DKYLSDAIEIDVDALADS GNV IGGIMEHIE AGVHSGDSAC +P
Sbjct: 841  ENAVEVDPERPVLVDKYLSDAIEIDVDALADSHGNVTIGGIMEHIELAGVHSGDSACSLP 900

Query: 896  TKTISSSCLDTISSWTIKLAKRLNVCGLMNCQYAITTSGDVYLLEANPRASRTVPFVSKA 955
            TKTI SSCL+TI +WT KLAKRLNVCGLMNCQYAIT +G+V+LLEANPRASRTVPFVSKA
Sbjct: 901  TKTIPSSCLETIRNWTTKLAKRLNVCGLMNCQYAITMAGEVFLLEANPRASRTVPFVSKA 960

Query: 956  IGHPLAKYAALVMSGKSLNDLGFTKEVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGE 1015
            IGHPLAKYA+LVMSGKSL +LGFTKEVIPKHVSVKEAVLPFEKFQG DVLLGPEMRSTGE
Sbjct: 961  IGHPLAKYASLVMSGKSLYELGFTKEVIPKHVSVKEAVLPFEKFQGSDVLLGPEMRSTGE 1020

Query: 1016 VMGIDMSFPIAFAKAQIAAGQKLPLSGTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSG 1075
            VMG+D  FPIAFAKAQIAAG KLPLSGT+FLSLNDLTKPHL +IAKAFL++GF I +TSG
Sbjct: 1021 VMGLDFQFPIAFAKAQIAAGNKLPLSGTLFLSLNDLTKPHLSKIAKAFLELGFSITATSG 1080

Query: 1076 TAHFLELKGIAVERVLKMHEGRPHAGDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLA 1135
            TAH LEL+G+ VERVLK+HEGRPHAGD++ANGQIQ+M+ITSSGD LDQIDG  LRR  LA
Sbjct: 1081 TAHVLELEGLPVERVLKLHEGRPHAGDILANGQIQLMIITSSGDDLDQIDGRHLRRMALA 1140

Query: 1136 YKVPVITTVSGALANAEAIRSLKSNTVTMTALQDFFDVETASGSSENLQSVS 1187
            YKVP+ITTV+GALA AEAI+SLKS++V+M  LQDFF VET SGS ++LQS S
Sbjct: 1141 YKVPIITTVAGALATAEAIKSLKSSSVSMIPLQDFF-VETKSGSQKDLQSAS 1191


>gi|147781717|emb|CAN69740.1| hypothetical protein VITISV_017584 [Vitis vinifera]
          Length = 1204

 Score = 2043 bits (5294), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 1000/1217 (82%), Positives = 1090/1217 (89%), Gaps = 40/1217 (3%)

Query: 1    MSYCLNHCKNLSPSSFLAQKPSFPLTRHID----FRSFLYSNK-KTGSLSLRSWPPQLTR 55
            M +C+NH     P++F  +  S  L  +      FR F Y N+ +TGS        +L  
Sbjct: 1    MGFCMNH-----PATFSGRSISSSLNPYSSNPTCFRIFFYPNQLRTGS--------RLVG 47

Query: 56   YSR--SRVRASSAKIDSS--AELSNGAASSKDQKLGKRTDLRKILILGAGPIVIGQACEF 111
             +R  SRVRAS  + +    ++ +NG A+      GKRTDL+KI+ILGAGPIVIGQACEF
Sbjct: 48   LARLASRVRASPVRAEKGVGSDSTNGTAAFGGAPAGKRTDLKKIMILGAGPIVIGQACEF 107

Query: 112  DYSGTQACKALKEEGYEVILINSNPATIMTDPGLADRTYITPMTPELVEQVLEKERPDAL 171
            DYSGTQACKALKEEGYEV+LINSNPATIMTDP +AD+TYITPMTP LVEQVLEKERPDA+
Sbjct: 108  DYSGTQACKALKEEGYEVVLINSNPATIMTDPDMADKTYITPMTPXLVEQVLEKERPDAI 167

Query: 172  LPTMGGQTALNLAVALAESGALEKYGVELIGAKLDAIKKAEDRDLFKQAMKTIGVKTPPS 231
            LPTMGGQTALNLAVALAESG LEKYGVELIGAKL+AIKKAEDR+LFKQAM+ IGVKTPPS
Sbjct: 168  LPTMGGQTALNLAVALAESGVLEKYGVELIGAKLEAIKKAEDRELFKQAMENIGVKTPPS 227

Query: 232  GIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGIAYNKEEFEAICKAGLAASLTSQVL 291
            GIG TLDEC+ IAN IGEFPLIIRPAFTLGGTGGGIAYN+EEFEAICK+GLAASLTSQVL
Sbjct: 228  GIGTTLDECMEIANSIGEFPLIIRPAFTLGGTGGGIAYNREEFEAICKSGLAASLTSQVL 287

Query: 292  VEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMGVHTGDSITVAPAQTLTDKEYQRLR 351
            VEKSLLGWKEYELEVMRDLADNVVIICSIEN+DPMGVHTGDSITVAPAQTLTDKEYQRLR
Sbjct: 288  VEKSLLGWKEYELEVMRDLADNVVIICSIENIDPMGVHTGDSITVAPAQTLTDKEYQRLR 347

Query: 352  DYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMNPRVSRSSALASKATGFPIAKMAAK 411
            DYS+AIIREIGVECGGSNVQFAVNPVDGEVMVIEMNPRVSRSSALASKATGFPIAKMAAK
Sbjct: 348  DYSVAIIREIGVECGGSNVQFAVNPVDGEVMVIEMNPRVSRSSALASKATGFPIAKMAAK 407

Query: 412  LSVGYSLDQIPNDITKKTPASFEPSIDYVVTK------------------IPRFAFEKFP 453
            LSVGYSLDQIPNDITKKTPASFEPSIDYVVTK                  IPRFAFEKFP
Sbjct: 408  LSVGYSLDQIPNDITKKTPASFEPSIDYVVTKATYPLASQXNMFLNGILMIPRFAFEKFP 467

Query: 454  GSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDWEQLKYSL 513
            GS+P+LTTQMKSVGE+MALGRTFQESFQKA+RSLECG+SGWGC+ +KE+DWDWEQLKYSL
Sbjct: 468  GSQPILTTQMKSVGESMALGRTFQESFQKAVRSLECGYSGWGCAQLKEMDWDWEQLKYSL 527

Query: 514  RVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSVSNMTKDD 573
            RVPNPDR+ AIYAAMKKGMKVD+IHELSFIDKWFL Q KEL+DVEQFLL++S+S+++KDD
Sbjct: 528  RVPNPDRIHAIYAAMKKGMKVDDIHELSFIDKWFLXQLKELVDVEQFLLSRSLSDLSKDD 587

Query: 574  FYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTPYMYSSYD 633
            FYEVKRRGFSDKQIAFA+KSTEKEVR KRLSLGV P+YKRVDTCAAEFEANTPYMYSSYD
Sbjct: 588  FYEVKRRGFSDKQIAFASKSTEKEVRLKRLSLGVTPAYKRVDTCAAEFEANTPYMYSSYD 647

Query: 634  FECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSNPETVSTD 693
            FECESAPTQ+KKVLILGGGPNRIGQGIEFDYCCCHTSF+LQ AGYETIMMNSNPETVSTD
Sbjct: 648  FECESAPTQRKKVLILGGGPNRIGQGIEFDYCCCHTSFALQKAGYETIMMNSNPETVSTD 707

Query: 694  YDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHRLPSASGD 753
            YDTSDRLYFEPLTVEDVLN+IDLE P+GIIVQFGGQTPLKL+LPI  YLDEHR  SASG 
Sbjct: 708  YDTSDRLYFEPLTVEDVLNIIDLEXPDGIIVQFGGQTPLKLALPIQNYLDEHRPLSASGV 767

Query: 754  GLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEIGYPVVVRP 813
            G VRIWGTSPDSIDAAE+RERFNAI+ +L IEQPKGGIAKSEADALAIA +IGYPVVVRP
Sbjct: 768  GHVRIWGTSPDSIDAAENRERFNAILNDLKIEQPKGGIAKSEADALAIAMDIGYPVVVRP 827

Query: 814  SYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALADSCGNVVI 873
            SYVLGGRAMEIVY+D+ LVTYLENAVEVDPERPVLID+YLSDAIEIDVDALADS GNVVI
Sbjct: 828  SYVLGGRAMEIVYSDDKLVTYLENAVEVDPERPVLIDRYLSDAIEIDVDALADSEGNVVI 887

Query: 874  GGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNCQYAITTS 933
            GGIMEHIEQAGVHSGDSAC +PTKTI SSCLDTI SWT  LAK+LNVCGLMNCQYAIT S
Sbjct: 888  GGIMEHIEQAGVHSGDSACSLPTKTIPSSCLDTIRSWTTILAKKLNVCGLMNCQYAITAS 947

Query: 934  GDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPKHVSVKEAV 993
            G V+LLEANPRASRTVPFVSKAIGHPLAKYA+LVMSGKSL+DL FTKEVIP+HVSVKEAV
Sbjct: 948  GSVFLLEANPRASRTVPFVSKAIGHPLAKYASLVMSGKSLHDLCFTKEVIPRHVSVKEAV 1007

Query: 994  LPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVFLSLNDLTK 1053
            LPFEKFQGCDVLLGPEMRSTGEVMGID  FP+AFAKAQIAAGQKLP+SGTVFLSLNDLTK
Sbjct: 1008 LPFEKFQGCDVLLGPEMRSTGEVMGIDFEFPVAFAKAQIAAGQKLPVSGTVFLSLNDLTK 1067

Query: 1054 PHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVANGQIQMMV 1113
            PHL  IA++F+ +GF+IVSTSGTAH LEL+GI VERVLKMHEGRPHAGDM+ANGQIQ+MV
Sbjct: 1068 PHLATIARSFIGLGFRIVSTSGTAHVLELEGIPVERVLKMHEGRPHAGDMIANGQIQLMV 1127

Query: 1114 ITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTVTMTALQDFFDV 1173
            ITSSGD+ DQIDG +LRR  LAYKVP+ITTV+GA A+ EAI+SLK   + M ALQDFFD+
Sbjct: 1128 ITSSGDTHDQIDGRQLRRMALAYKVPIITTVAGASASVEAIKSLKCCAIKMIALQDFFDI 1187

Query: 1174 ETASGSSENLQSVSTSL 1190
            E+   S++N+QS S+ L
Sbjct: 1188 ESEKESTKNVQSASSFL 1204


>gi|21535791|emb|CAC85727.1| putative carbamoyl phosphate synthase large subunit [Nicotiana
            tabacum]
          Length = 1203

 Score = 2023 bits (5241), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 981/1207 (81%), Positives = 1073/1207 (88%), Gaps = 24/1207 (1%)

Query: 1    MSYCLNHCKN-------------LSPSSFLAQKPS-FPLTRHIDFRSFLYSNKKTGSLSL 46
            M YC+NHC+N             L PS   + +   FPL     + S     K +  L L
Sbjct: 3    MGYCMNHCENAAYRLMSSSSSSVLPPSKIYSSRTHLFPL-----YSSKAAVYKSSSFLHL 57

Query: 47   RSWPPQLTR-YSRSRVRASSAKIDSSAELSNGAASSKDQKLGKRTDLRKILILGAGPIVI 105
            +S P  L   + R RV  S    + S    +     K QKLGKRTD++KILILGAGPIVI
Sbjct: 58   QSRPSVLGHTHLRKRVNFSIVN-EQSPSNDSVVQKGKQQKLGKRTDIKKILILGAGPIVI 116

Query: 106  GQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLADRTYITPMTPELVEQVLEK 165
            GQACEFDYSGTQACKAL+EEGYEVILINSNPATIMTDP +ADRTYI PMTPELVEQVLE+
Sbjct: 117  GQACEFDYSGTQACKALREEGYEVILINSNPATIMTDPEMADRTYIEPMTPELVEQVLER 176

Query: 166  ERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDAIKKAEDRDLFKQAMKTIG 225
            ERPDALLPTMGGQTALNLAV LAESG L+ YGVELIGAKL AIKKAEDRDLFKQAMK IG
Sbjct: 177  ERPDALLPTMGGQTALNLAVXLAESGVLDXYGVELIGAKLGAIKKAEDRDLFKQAMKNIG 236

Query: 226  VKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGIAYNKEEFEAICKAGLAAS 285
            +KTPPSGIGNTL+ECI IA EIGEFPLIIRPAFTLGGTGGGIAYN+EEFEAICK+GLAAS
Sbjct: 237  IKTPPSGIGNTLEECIEIAGEIGEFPLIIRPAFTLGGTGGGIAYNREEFEAICKSGLAAS 296

Query: 286  LTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMGVHTGDSITVAPAQTLTDK 345
            LTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIEN+DPMGVHTGDSITVAPAQTLTDK
Sbjct: 297  LTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENIDPMGVHTGDSITVAPAQTLTDK 356

Query: 346  EYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMNPRVSRSSALASKATGFPI 405
            EYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMNPRVSRSSALASKATGFPI
Sbjct: 357  EYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMNPRVSRSSALASKATGFPI 416

Query: 406  AKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRFAFEKFPGSEPLLTTQMKS 465
            AKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRFAFEKFPGSE +LTTQMKS
Sbjct: 417  AKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRFAFEKFPGSEAILTTQMKS 476

Query: 466  VGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDWEQLKYSLRVPNPDRMQAIY 525
            VGE+MA+GRTFQESFQKA+RSLECG+SGWGC+ VKELDWDW++LKYSLRVPNPDR+ A+Y
Sbjct: 477  VGESMAVGRTFQESFQKAVRSLECGYSGWGCTQVKELDWDWDKLKYSLRVPNPDRIHAVY 536

Query: 526  AAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSVSNMTKDDFYEVKRRGFSDK 585
            AAMK+GMKVD+I ELS+IDKWFLTQ +EL+DVEQFLL +S+S++TKDDFYEVK+RGFSD+
Sbjct: 537  AAMKRGMKVDDIFELSYIDKWFLTQLRELVDVEQFLLARSLSDLTKDDFYEVKKRGFSDR 596

Query: 586  QIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTPYMYSSYDFECESAPTQKKK 645
            QIAFATKS+E+EVR +RLSLGV P+YKRVDTCAAEFEA+TPYMYSSYD ECESAPT +KK
Sbjct: 597  QIAFATKSSEEEVRSRRLSLGVKPAYKRVDTCAAEFEADTPYMYSSYDIECESAPTGRKK 656

Query: 646  VLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSNPETVSTDYDTSDRLYFEPL 705
            VLILGGGPNRIGQGIEFDYCCCHTSF+LQ AGYETIMMNSNPETVSTDYDTSDRLYFEPL
Sbjct: 657  VLILGGGPNRIGQGIEFDYCCCHTSFALQDAGYETIMMNSNPETVSTDYDTSDRLYFEPL 716

Query: 706  TVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHRLPSASGDGLVRIWGTSPDS 765
            TVEDVLN+IDLE P+GIIVQFGGQTPLKL+LPI  YLDE R  + SG G VRIWGTSPDS
Sbjct: 717  TVEDVLNIIDLEGPDGIIVQFGGQTPLKLALPIQNYLDERRPKTRSGAGFVRIWGTSPDS 776

Query: 766  IDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEIGYPVVVRPSYVLGGRAMEIV 825
            IDAAEDRERFNAI+ EL I QPKGGIAKSE DA+AIA E+GYPVVVRPSYVLGGRAMEIV
Sbjct: 777  IDAAEDRERFNAILNELQIVQPKGGIAKSEKDAVAIATEVGYPVVVRPSYVLGGRAMEIV 836

Query: 826  YTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALADSCGNVVIGGIMEHIEQAGV 885
            Y ++ LVTYLENAV+VDPERPVLIDKYL+DA+EID+DALAD  GNVVIGGIMEHIEQAGV
Sbjct: 837  YNNDKLVTYLENAVKVDPERPVLIDKYLTDAVEIDIDALADLHGNVVIGGIMEHIEQAGV 896

Query: 886  HSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNCQYAITTSGDVYLLEANPRA 945
            HSGDSACM+PT+TIS SCL+TI SWT KLAKRLNVCGLMNCQYAI+ SG+V+LLEANPRA
Sbjct: 897  HSGDSACMLPTQTISDSCLETIRSWTTKLAKRLNVCGLMNCQYAISASGEVFLLEANPRA 956

Query: 946  SRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPKHVSVKEAVLPFEKFQGCDVL 1005
            SRTVPFVSKAIGHPLAKYA+LVMSGKSL+DL FTKEVIP+HVSVKEAVLPFEKFQGCDVL
Sbjct: 957  SRTVPFVSKAIGHPLAKYASLVMSGKSLHDLNFTKEVIPRHVSVKEAVLPFEKFQGCDVL 1016

Query: 1006 LGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVFLSLNDLTKPHLERIAKAFLD 1065
            LGPEMRSTGEVMGI     IAFAKAQIAAGQK+PLSGT+FLSLN+LTKP L  IA+AFL 
Sbjct: 1017 LGPEMRSTGEVMGIHYESSIAFAKAQIAAGQKMPLSGTLFLSLNELTKPQLTTIARAFLG 1076

Query: 1066 IGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVANGQIQMMVITSSGDSLDQID 1125
            IGF+I++TSGTA  LEL+G+ VERVLKMHEGRPHA D++ANGQIQ+MVITSSGD+LDQID
Sbjct: 1077 IGFQIIATSGTARVLELEGMPVERVLKMHEGRPHAADLIANGQIQLMVITSSGDTLDQID 1136

Query: 1126 GLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTVTMTALQDFFDVETASGSSENLQ- 1184
            G KLRR  LAYK+PVITTV+GALA A+AI+SLK N + MTALQD+FDV+      +NLQ 
Sbjct: 1137 GRKLRRMALAYKIPVITTVAGALATADAIKSLKCNKIKMTALQDYFDVKKVEAELKNLQC 1196

Query: 1185 --SVSTS 1189
              SVSTS
Sbjct: 1197 ASSVSTS 1203


>gi|18397283|ref|NP_564338.1| carbamoyl phosphate synthetase B [Arabidopsis thaliana]
 gi|9972356|gb|AAG10606.1|AC008030_6 carbamoyl phosphate synthetase large chain (carB) [Arabidopsis
            thaliana]
 gi|14194125|gb|AAK56257.1|AF367268_1 At1g29900/F1N18_6 [Arabidopsis thaliana]
 gi|1477480|gb|AAB67843.1| carbamoyl phosphate synthetase large chain [Arabidopsis thaliana]
 gi|22137066|gb|AAM91378.1| At1g29900/F1N18_6 [Arabidopsis thaliana]
 gi|332193027|gb|AEE31148.1| carbamoyl phosphate synthetase B [Arabidopsis thaliana]
          Length = 1187

 Score = 2004 bits (5191), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 973/1186 (82%), Positives = 1061/1186 (89%), Gaps = 19/1186 (1%)

Query: 6    NHCKNLSP--SSFLAQKPSFP------LTRHIDF-RSFLYSNKK----TGSLSLRSWPPQ 52
            NHC  LS   SS  A   S P      L+    F RS +Y   K    + S S  ++PP 
Sbjct: 3    NHCLELSSNCSSIFASSKSNPRFSPSKLSYSTFFSRSAIYYRSKPKQASSSSSFSTFPPC 62

Query: 53   LTRYSRSRVRASSAKIDSSAELSNGAASS-KDQKLGKRTDLRKILILGAGPIVIGQACEF 111
            L R S     + +  +   +EL++        + +GKRTDL+KI+ILGAGPIVIGQACEF
Sbjct: 63   LNRKS-----SLTHVLKPVSELADTTTKPFSPEIVGKRTDLKKIMILGAGPIVIGQACEF 117

Query: 112  DYSGTQACKALKEEGYEVILINSNPATIMTDPGLADRTYITPMTPELVEQVLEKERPDAL 171
            DYSGTQACKAL+EEGYEVILINSNPATIMTDP  A+RTYI PMTPELVEQV+EKERPDAL
Sbjct: 118  DYSGTQACKALREEGYEVILINSNPATIMTDPETANRTYIAPMTPELVEQVIEKERPDAL 177

Query: 172  LPTMGGQTALNLAVALAESGALEKYGVELIGAKLDAIKKAEDRDLFKQAMKTIGVKTPPS 231
            LPTMGGQTALNLAVALAESGALEKYGVELIGAKL AIKKAEDR+LFK AMK IG+KTPPS
Sbjct: 178  LPTMGGQTALNLAVALAESGALEKYGVELIGAKLGAIKKAEDRELFKDAMKNIGLKTPPS 237

Query: 232  GIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGIAYNKEEFEAICKAGLAASLTSQVL 291
            GIG TLDEC  IA +IGEFPLIIRPAFTLGGTGGGIAYNKEEFE+ICK+GLAAS TSQVL
Sbjct: 238  GIGTTLDECFDIAEKIGEFPLIIRPAFTLGGTGGGIAYNKEEFESICKSGLAASATSQVL 297

Query: 292  VEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMGVHTGDSITVAPAQTLTDKEYQRLR 351
            VEKSLLGWKEYELEVMRDLADNVVIICSIEN+DPMGVHTGDSITVAPAQTLTD+EYQRLR
Sbjct: 298  VEKSLLGWKEYELEVMRDLADNVVIICSIENIDPMGVHTGDSITVAPAQTLTDREYQRLR 357

Query: 352  DYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMNPRVSRSSALASKATGFPIAKMAAK 411
            DYSIAIIREIGVECGGSNVQFAVNPVDGEVM+IEMNPRVSRSSALASKATGFPIAKMAAK
Sbjct: 358  DYSIAIIREIGVECGGSNVQFAVNPVDGEVMIIEMNPRVSRSSALASKATGFPIAKMAAK 417

Query: 412  LSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRFAFEKFPGSEPLLTTQMKSVGEAMA 471
            LSVGY+LDQIPNDIT+KTPASFEPSIDYVVTKIPRFAFEKFPGS+PLLTTQMKSVGE+MA
Sbjct: 418  LSVGYTLDQIPNDITRKTPASFEPSIDYVVTKIPRFAFEKFPGSQPLLTTQMKSVGESMA 477

Query: 472  LGRTFQESFQKALRSLECGFSGWGCSNVKELDWDWEQLKYSLRVPNPDRMQAIYAAMKKG 531
            LGRTFQESFQKALRSLECGFSGWGC+ +KELDWDW+QLKYSLRVPNPDR+ AIYAAMKKG
Sbjct: 478  LGRTFQESFQKALRSLECGFSGWGCAKIKELDWDWDQLKYSLRVPNPDRIHAIYAAMKKG 537

Query: 532  MKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSVSNMTKDDFYEVKRRGFSDKQIAFAT 591
            MK+DEI+ELS +DKWFLTQ KEL+DVEQ+L++ ++S +TK+D YEVK+RGFSDKQIAFAT
Sbjct: 538  MKIDEIYELSMVDKWFLTQLKELVDVEQYLMSGTLSEITKEDLYEVKKRGFSDKQIAFAT 597

Query: 592  KSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTPYMYSSYDFECESAPTQKKKVLILGG 651
            K+TE+EVR KR+SLGV+PSYKRVDTCAAEFEA+TPYMYSSYD ECESAP  KKKVLILGG
Sbjct: 598  KTTEEEVRTKRISLGVVPSYKRVDTCAAEFEAHTPYMYSSYDVECESAPNNKKKVLILGG 657

Query: 652  GPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSNPETVSTDYDTSDRLYFEPLTVEDVL 711
            GPNRIGQGIEFDYCCCHTSF+LQ AGYETIM+NSNPETVSTDYDTSDRLYFEPLT+EDVL
Sbjct: 658  GPNRIGQGIEFDYCCCHTSFALQDAGYETIMLNSNPETVSTDYDTSDRLYFEPLTIEDVL 717

Query: 712  NVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHRLPSASGDGLVRIWGTSPDSIDAAED 771
            NVIDLE+P+GIIVQFGGQTPLKL+LPI  YLD+H   S SG G VRIWGTSPDSIDAAED
Sbjct: 718  NVIDLEKPDGIIVQFGGQTPLKLALPIKHYLDKHMPMSLSGAGPVRIWGTSPDSIDAAED 777

Query: 772  RERFNAIIKELSIEQPKGGIAKSEADALAIAKEIGYPVVVRPSYVLGGRAMEIVYTDETL 831
            RERFNAI+ EL IEQPKGGIAKSEADALAIAKE+GYPVVVRPSYVLGGRAMEIVY D  L
Sbjct: 778  RERFNAILDELKIEQPKGGIAKSEADALAIAKEVGYPVVVRPSYVLGGRAMEIVYDDSRL 837

Query: 832  VTYLENAVEVDPERPVLIDKYLSDAIEIDVDALADSCGNVVIGGIMEHIEQAGVHSGDSA 891
            +TYLENAV+VDPERPVL+DKYLSDAIEIDVD L DS GNVVIGGIMEHIEQAGVHSGDSA
Sbjct: 838  ITYLENAVQVDPERPVLVDKYLSDAIEIDVDTLTDSYGNVVIGGIMEHIEQAGVHSGDSA 897

Query: 892  CMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNCQYAITTSGDVYLLEANPRASRTVPF 951
            CM+PT+TI +SCL TI +WT KLAK+LNVCGLMNCQYAITTSGDV+LLEANPRASRTVPF
Sbjct: 898  CMLPTQTIPASCLQTIRTWTTKLAKKLNVCGLMNCQYAITTSGDVFLLEANPRASRTVPF 957

Query: 952  VSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPKHVSVKEAVLPFEKFQGCDVLLGPEMR 1011
            VSKAIGHPLAKYAALVMSGKSL DL F KEVIPKHVSVKEAV PFEKFQGCDV+LGPEMR
Sbjct: 958  VSKAIGHPLAKYAALVMSGKSLKDLNFEKEVIPKHVSVKEAVFPFEKFQGCDVILGPEMR 1017

Query: 1012 STGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVFLSLNDLTKPHLERIAKAFLDIGFKIV 1071
            STGEVM I   F  AFA AQIAAGQKLPLSGTVFLSLND+TKPHLE+IA +FL++GFKIV
Sbjct: 1018 STGEVMSISSEFSSAFAMAQIAAGQKLPLSGTVFLSLNDMTKPHLEKIAVSFLELGFKIV 1077

Query: 1072 STSGTAHFLELKGIAVERVLKMHEGRPHAGDMVANGQIQMMVITSSGDSLDQIDGLKLRR 1131
            +TSGTAHFLELKGI VERVLK+HEGRPHA DMVANGQI +M+ITSSGD+LDQ DG +LR+
Sbjct: 1078 ATSGTAHFLELKGIPVERVLKLHEGRPHAADMVANGQIHLMLITSSGDALDQKDGRQLRQ 1137

Query: 1132 RGLAYKVPVITTVSGALANAEAIRSLKSNTVTMTALQDFFDVETAS 1177
              LAYKVPVITTV+GALA AE I+SLKS+ + MTALQDFF+V+  S
Sbjct: 1138 MALAYKVPVITTVAGALATAEGIKSLKSSAIKMTALQDFFEVKNVS 1183


>gi|297845912|ref|XP_002890837.1| hypothetical protein ARALYDRAFT_473200 [Arabidopsis lyrata subsp.
            lyrata]
 gi|297336679|gb|EFH67096.1| hypothetical protein ARALYDRAFT_473200 [Arabidopsis lyrata subsp.
            lyrata]
          Length = 1183

 Score = 2003 bits (5190), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 950/1092 (86%), Positives = 1024/1092 (93%)

Query: 86   LGKRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGL 145
            +GKRTDL+KI+ILGAGPIVIGQACEFDYSGTQACKAL+EEGYEVILINSNPATIMTDP  
Sbjct: 88   VGKRTDLKKIMILGAGPIVIGQACEFDYSGTQACKALREEGYEVILINSNPATIMTDPET 147

Query: 146  ADRTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKL 205
            A+RTYI PMTPELVEQV+EKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKL
Sbjct: 148  ANRTYIAPMTPELVEQVIEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKL 207

Query: 206  DAIKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGG 265
             AIKKAEDR+LFK+AMK IG+KTPPSGIGNTLDEC  IA  IGEFPLIIRPAFTLGGTGG
Sbjct: 208  GAIKKAEDRELFKEAMKNIGLKTPPSGIGNTLDECFDIAERIGEFPLIIRPAFTLGGTGG 267

Query: 266  GIAYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDP 325
            GIAYNKEEFE+ICKAGLAAS+TSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIEN+DP
Sbjct: 268  GIAYNKEEFESICKAGLAASVTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENIDP 327

Query: 326  MGVHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIE 385
            MGVHTGDSITVAPAQTLTD+EYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVM+IE
Sbjct: 328  MGVHTGDSITVAPAQTLTDREYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMIIE 387

Query: 386  MNPRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIP 445
            MNPRVSRSSALASKATGFPIAKMAAKLSVGY+LDQIPNDIT+KTPASFEPSIDYVVTKIP
Sbjct: 388  MNPRVSRSSALASKATGFPIAKMAAKLSVGYTLDQIPNDITRKTPASFEPSIDYVVTKIP 447

Query: 446  RFAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWD 505
            RFAFEKFPGS+PLLTTQMKSVGE+MALGRTFQESFQKALRSLECGFSGWGC+ +KELDWD
Sbjct: 448  RFAFEKFPGSQPLLTTQMKSVGESMALGRTFQESFQKALRSLECGFSGWGCAKIKELDWD 507

Query: 506  WEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQS 565
            W+QLKYSLRVPNPDR+ AIYAAMKKGMK+DEI+ELS +DKWFLTQ KEL+DVEQ+L++  
Sbjct: 508  WDQLKYSLRVPNPDRIHAIYAAMKKGMKIDEIYELSMVDKWFLTQLKELVDVEQYLMSGP 567

Query: 566  VSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANT 625
            +S +TK+D YEVK+RGFSDKQI+FATK+TE+EVR KR+SLGV+PSYKRVDTCAAEFEA+T
Sbjct: 568  LSEITKEDLYEVKKRGFSDKQISFATKTTEEEVRTKRISLGVVPSYKRVDTCAAEFEAHT 627

Query: 626  PYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNS 685
            PYMYSSYDFECESAP  KKKVLILGGGPNRIGQGIEFDYCCCHTSF+LQ AGYETIM+NS
Sbjct: 628  PYMYSSYDFECESAPNSKKKVLILGGGPNRIGQGIEFDYCCCHTSFALQDAGYETIMLNS 687

Query: 686  NPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEH 745
            NPETVSTDYDTSDRLYFEPLT+EDVLNVIDLE+P+GIIVQFGGQTPLKL+LPI  YLD+H
Sbjct: 688  NPETVSTDYDTSDRLYFEPLTIEDVLNVIDLEKPDGIIVQFGGQTPLKLALPIKHYLDKH 747

Query: 746  RLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEI 805
               S SG G VRIWGTSPDSIDAAEDRERFNAI+ EL IEQPKGGIAKSEADALAIAKE+
Sbjct: 748  MPMSLSGAGPVRIWGTSPDSIDAAEDRERFNAILDELKIEQPKGGIAKSEADALAIAKEV 807

Query: 806  GYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALA 865
            GYPVVVRPSYVLGGRAMEIVY D  L+TYLENAVEVDPERPVL+DKYLSDAIEIDVD L 
Sbjct: 808  GYPVVVRPSYVLGGRAMEIVYDDSRLITYLENAVEVDPERPVLVDKYLSDAIEIDVDTLT 867

Query: 866  DSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMN 925
            DS GNVVIGGIMEHIEQAGVHSGDSACM+PT+TI SSCL TI  WT KLAK+LNVCGLMN
Sbjct: 868  DSYGNVVIGGIMEHIEQAGVHSGDSACMLPTQTIPSSCLQTIRQWTTKLAKKLNVCGLMN 927

Query: 926  CQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPK 985
            CQYAITTSGDV+LLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSL DL F KEVIPK
Sbjct: 928  CQYAITTSGDVFLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLKDLNFEKEVIPK 987

Query: 986  HVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVF 1045
            HVSVKEAV PFEKFQGCDV+LGPEMRSTGEVM I   F  AFA AQIAAGQKLPL+GTVF
Sbjct: 988  HVSVKEAVFPFEKFQGCDVILGPEMRSTGEVMSISSEFSSAFAMAQIAAGQKLPLTGTVF 1047

Query: 1046 LSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVA 1105
            LSLND+TK HLE+IA +FL++GFKIV+TSGTAHFLELKGI VERVLK+HEGRPHA DMVA
Sbjct: 1048 LSLNDMTKTHLEKIAVSFLELGFKIVATSGTAHFLELKGIPVERVLKLHEGRPHAADMVA 1107

Query: 1106 NGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTVTMT 1165
            NGQI +M+ITSSGD+LDQ DG +LR+  LAYKVPVITTV+GALA AE I+SLKS+ + MT
Sbjct: 1108 NGQIHLMLITSSGDALDQKDGRQLRQMALAYKVPVITTVAGALATAEGIKSLKSSAIKMT 1167

Query: 1166 ALQDFFDVETAS 1177
            ALQDFF+V+  S
Sbjct: 1168 ALQDFFEVKNVS 1179


>gi|356547198|ref|XP_003542003.1| PREDICTED: carbamoyl-phosphate synthase large chain-like [Glycine
            max]
          Length = 1164

 Score = 1981 bits (5133), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 957/1177 (81%), Positives = 1049/1177 (89%), Gaps = 19/1177 (1%)

Query: 1    MSYCLNHCKNLSPSSFLAQKPSFPLTRHIDFRS---FLYSNKKTGSLSLRSWPPQLTRYS 57
            M+YC++H   L         PSFP ++ I FRS       N      +LR  PP   R +
Sbjct: 1    MAYCISHFPKLP------LLPSFPQSQ-IPFRSPKTLRSQNDAVPPTTLRGCPPPTARLN 53

Query: 58   RSRVRASSAKIDSSAELSNGAASSKDQKLGKRTDLRKILILGAGPIVIGQACEFDYSGTQ 117
             +RVR S+  +         A  +   +LGKRTD++KILILGAGPIVIGQACEFDYSGTQ
Sbjct: 54   PARVRCSTVAV---------AEPTTAPQLGKRTDIKKILILGAGPIVIGQACEFDYSGTQ 104

Query: 118  ACKALKEEGYEVILINSNPATIMTDPGLADRTYITPMTPELVEQVLEKERPDALLPTMGG 177
            ACKAL+EEGYEV+LINSNPATIMTDP  ADRTYITPMTPELVE+VLE ERPDALLPTMGG
Sbjct: 105  ACKALREEGYEVVLINSNPATIMTDPETADRTYITPMTPELVERVLESERPDALLPTMGG 164

Query: 178  QTALNLAVALAESGALEKYGVELIGAKLDAIKKAEDRDLFKQAMKTIGVKTPPSGIGNTL 237
            QTALNLAVALAESGALEKYGVELIGAKLDAIKKAEDR+LFKQAM+ IG+KTPPSGIG TL
Sbjct: 165  QTALNLAVALAESGALEKYGVELIGAKLDAIKKAEDRELFKQAMQNIGIKTPPSGIGTTL 224

Query: 238  DECISIANEIGEFPLIIRPAFTLGGTGGGIAYNKEEFEAICKAGLAASLTSQVLVEKSLL 297
            DEC+SIAN+IGE+PLI+RPAFTLGGTGGGIAYN+E+   ICK+G+AASLT+QVL+EKSLL
Sbjct: 225  DECLSIANDIGEYPLIVRPAFTLGGTGGGIAYNREDLLEICKSGIAASLTNQVLIEKSLL 284

Query: 298  GWKEYELEVMRDLADNVVIICSIENVDPMGVHTGDSITVAPAQTLTDKEYQRLRDYSIAI 357
            GWKEYELEVMRDLADNVVIICSIEN+DPMGVHTGDSITVAPAQTLTDKEYQRLRDYSIAI
Sbjct: 285  GWKEYELEVMRDLADNVVIICSIENIDPMGVHTGDSITVAPAQTLTDKEYQRLRDYSIAI 344

Query: 358  IREIGVECGGSNVQFAVNPVDGEVMVIEMNPRVSRSSALASKATGFPIAKMAAKLSVGYS 417
            IREIGVECGGSNVQFAVNP +GEVMVIEMNPRVSRSSALASKATGFPIAKMAAKLSVGYS
Sbjct: 345  IREIGVECGGSNVQFAVNPENGEVMVIEMNPRVSRSSALASKATGFPIAKMAAKLSVGYS 404

Query: 418  LDQIPNDITKKTPASFEPSIDYVVTKIPRFAFEKFPGSEPLLTTQMKSVGEAMALGRTFQ 477
            LDQIPNDITKKTPASFEPSIDYVVTKIPRFAFEKFPGS+P+LTTQMKSVGE+MA+GR FQ
Sbjct: 405  LDQIPNDITKKTPASFEPSIDYVVTKIPRFAFEKFPGSQPILTTQMKSVGESMAVGRNFQ 464

Query: 478  ESFQKALRSLECGFSGWGCSNVKELDWDWEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEI 537
            ESFQKA+RSLECG+SGWGCS VKE+++D EQLKYSLRVPNP+R+ AIYAAMK+GM +DEI
Sbjct: 465  ESFQKAVRSLECGYSGWGCSQVKEMNYDLEQLKYSLRVPNPERIHAIYAAMKRGMHIDEI 524

Query: 538  HELSFIDKWFLTQFKELIDVEQFLLTQSVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKE 597
             ELS+IDKWFL Q KEL+DVE FLL+ ++S++T  DFYEVK+RGFSDKQIAFATKSTEKE
Sbjct: 525  FELSYIDKWFLMQLKELVDVESFLLSHNLSDLTNIDFYEVKKRGFSDKQIAFATKSTEKE 584

Query: 598  VREKRLSLGVIPSYKRVDTCAAEFEANTPYMYSSYDFECESAPTQKKKVLILGGGPNRIG 657
            VR KRLSLGV P+YKRVDTCAAEFEANTPYMYSSYDFECESAPT +KKVLILGGGPNRIG
Sbjct: 585  VRNKRLSLGVTPAYKRVDTCAAEFEANTPYMYSSYDFECESAPTTRKKVLILGGGPNRIG 644

Query: 658  QGIEFDYCCCHTSFSLQSAGYETIMMNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLE 717
            QGIEFDYCCCH SF+LQ AGYETIM+NSNPETVSTDYDTSDRLYFEPLTVEDVLN+IDLE
Sbjct: 645  QGIEFDYCCCHASFALQDAGYETIMVNSNPETVSTDYDTSDRLYFEPLTVEDVLNIIDLE 704

Query: 718  RPEGIIVQFGGQTPLKLSLPIHQYLDEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNA 777
            RP+GIIVQFGGQTPLKLSLPI QYLDEH+   ASG G VRIWGTSPDSID AEDRERFN 
Sbjct: 705  RPDGIIVQFGGQTPLKLSLPIQQYLDEHKPACASGVGHVRIWGTSPDSIDIAEDRERFNV 764

Query: 778  IIKELSIEQPKGGIAKSEADALAIAKEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLEN 837
            ++ EL IE PKGGIA+SE DALAIA +IGYPVVVRPSYVLGGRAMEIVYTD+ LVTYLEN
Sbjct: 765  MLHELKIEHPKGGIARSETDALAIAADIGYPVVVRPSYVLGGRAMEIVYTDDKLVTYLEN 824

Query: 838  AVEVDPERPVLIDKYLSDAIEIDVDALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTK 897
            AVEVDPERPVLIDKYLSDA EIDVDALADS GNVVIGGIMEHIEQAG+HSGDSAC IPT+
Sbjct: 825  AVEVDPERPVLIDKYLSDACEIDVDALADSQGNVVIGGIMEHIEQAGIHSGDSACSIPTR 884

Query: 898  TISSSCLDTISSWTIKLAKRLNVCGLMNCQYAITTSGDVYLLEANPRASRTVPFVSKAIG 957
            T+ SSCL+TI SWT  LAK+LNVCGLMNCQYAIT SGDV+LLEANPRASRTVPFVSKAIG
Sbjct: 885  TVPSSCLETIRSWTENLAKQLNVCGLMNCQYAITPSGDVFLLEANPRASRTVPFVSKAIG 944

Query: 958  HPLAKYAALVMSGKSLNDLGFTKEVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVM 1017
            HPLAKYA+LVMSGK+L DL FTKEVIPK+VSVKEAVLPF KF GCDV L PEMRSTGEVM
Sbjct: 945  HPLAKYASLVMSGKTLCDLQFTKEVIPKYVSVKEAVLPFSKFPGCDVFLSPEMRSTGEVM 1004

Query: 1018 GIDMSFPIAFAKAQIAAGQKLPLSGTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTA 1077
            GID S+ IAFAKAQIAAGQKLPLSGTVFLSLNDLTKPHL++IAKAF++ GFKIV+TSGTA
Sbjct: 1005 GIDPSYNIAFAKAQIAAGQKLPLSGTVFLSLNDLTKPHLQKIAKAFVENGFKIVATSGTA 1064

Query: 1078 HFLELKGIAVERVLKMHEGRPHAGDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYK 1137
            H L L  I  E VLK+HEGRPHAGDM+ANG IQ+MV+TSS D+LD+IDGL LRR  L YK
Sbjct: 1065 HVLNLAKIPAEPVLKLHEGRPHAGDMIANGDIQLMVVTSSDDALDRIDGLALRRMALDYK 1124

Query: 1138 VPVITTVSGALANAEAIRSLKSNTVTMTALQDFFDVE 1174
            VP++TTV+GALA AEAI SLK+N++ M ALQDF D E
Sbjct: 1125 VPIVTTVNGALATAEAINSLKANSIKMIALQDFIDGE 1161


>gi|356557483|ref|XP_003547045.1| PREDICTED: carbamoyl-phosphate synthase large chain-like [Glycine
            max]
          Length = 1161

 Score = 1976 bits (5119), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 945/1129 (83%), Positives = 1031/1129 (91%), Gaps = 10/1129 (0%)

Query: 46   LRSWPPQLTRYSRSRVRASSAKIDSSAELSNGAASSKDQKLGKRTDLRKILILGAGPIVI 105
            LR+ PP  TR + +RVR S+  +          A     KLGKRTD++KILILGAGPIVI
Sbjct: 40   LRACPPPTTRLNPARVRCSAVAV----------AEPPAPKLGKRTDIKKILILGAGPIVI 89

Query: 106  GQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLADRTYITPMTPELVEQVLEK 165
            GQACEFDYSGTQACKAL+EEGYEV+LINSNPATIMTDP  ADRTYITPMTP+LVE+VLE 
Sbjct: 90   GQACEFDYSGTQACKALREEGYEVVLINSNPATIMTDPETADRTYITPMTPDLVERVLES 149

Query: 166  ERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDAIKKAEDRDLFKQAMKTIG 225
            ERPDALLPTMGGQTALNLAVAL+ESGALEKYGVELIGAKLDAIKKAEDR+LFKQAMK IG
Sbjct: 150  ERPDALLPTMGGQTALNLAVALSESGALEKYGVELIGAKLDAIKKAEDRELFKQAMKNIG 209

Query: 226  VKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGIAYNKEEFEAICKAGLAAS 285
            +KTPPSGIG TLDEC+SIAN+IGE+PLI+RPAFTLGGTGGGIAYN+E+   ICKAG+AAS
Sbjct: 210  IKTPPSGIGTTLDECLSIANDIGEYPLIVRPAFTLGGTGGGIAYNREDLLEICKAGIAAS 269

Query: 286  LTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMGVHTGDSITVAPAQTLTDK 345
            LT+QVL+EKSLLGWKEYELEVMRDLADNVVIICSIEN+DPMGVHTGDSITVAPAQTLTDK
Sbjct: 270  LTNQVLIEKSLLGWKEYELEVMRDLADNVVIICSIENIDPMGVHTGDSITVAPAQTLTDK 329

Query: 346  EYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMNPRVSRSSALASKATGFPI 405
            EYQRLRDYSIAIIREIGVECGGSNVQFAVNP +GEVMVIEMNPRVSRSSALASKATGFPI
Sbjct: 330  EYQRLRDYSIAIIREIGVECGGSNVQFAVNPDNGEVMVIEMNPRVSRSSALASKATGFPI 389

Query: 406  AKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRFAFEKFPGSEPLLTTQMKS 465
            AKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRFAFEKFPGS+P+LTTQMKS
Sbjct: 390  AKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRFAFEKFPGSKPILTTQMKS 449

Query: 466  VGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDWEQLKYSLRVPNPDRMQAIY 525
            VGEAMA+GRTFQESFQKA+RSLE G+ GWGCS VKEL++D EQLKYSLRVPNP+R+ AIY
Sbjct: 450  VGEAMAVGRTFQESFQKAVRSLEYGYPGWGCSQVKELNYDLEQLKYSLRVPNPERIHAIY 509

Query: 526  AAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSVSNMTKDDFYEVKRRGFSDK 585
            AAMK+GM++DEI ELS+IDKWFLTQ KEL+DVE FLL+ ++S++T  DFYEVKRRGFSDK
Sbjct: 510  AAMKRGMQIDEIFELSYIDKWFLTQLKELVDVESFLLSHNLSDLTNIDFYEVKRRGFSDK 569

Query: 586  QIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTPYMYSSYDFECESAPTQKKK 645
            QIAFATKSTEKEVR +RLSLGV P+YKRVDTCAAEFEANTPYMYSSYDFECESAPT +KK
Sbjct: 570  QIAFATKSTEKEVRNRRLSLGVTPAYKRVDTCAAEFEANTPYMYSSYDFECESAPTTRKK 629

Query: 646  VLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSNPETVSTDYDTSDRLYFEPL 705
            VLILGGGPNRIGQGIEFDYCCCH SF+LQ AGYETIM+NSNPETVSTDYDTSDRLYFEPL
Sbjct: 630  VLILGGGPNRIGQGIEFDYCCCHASFALQDAGYETIMVNSNPETVSTDYDTSDRLYFEPL 689

Query: 706  TVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHRLPSASGDGLVRIWGTSPDS 765
            TVEDVLN+IDLERP+GIIVQFGGQTPLKLSLP+ QYLDEH+   ASG G VRIWGTSPDS
Sbjct: 690  TVEDVLNIIDLERPDGIIVQFGGQTPLKLSLPLQQYLDEHKPACASGVGHVRIWGTSPDS 749

Query: 766  IDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEIGYPVVVRPSYVLGGRAMEIV 825
            ID AEDRERFN ++ EL IE PKGGIA+SE DALAIA +IGYPVVVRPSYVLGGRAMEIV
Sbjct: 750  IDIAEDRERFNVMLHELKIEHPKGGIARSETDALAIAADIGYPVVVRPSYVLGGRAMEIV 809

Query: 826  YTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALADSCGNVVIGGIMEHIEQAGV 885
            Y+D  LVTYLENAVEVDPERPVLIDKYLSDA EIDVDALADS GNVVIGGIMEHIEQAG+
Sbjct: 810  YSDNKLVTYLENAVEVDPERPVLIDKYLSDACEIDVDALADSQGNVVIGGIMEHIEQAGI 869

Query: 886  HSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNCQYAITTSGDVYLLEANPRA 945
            HSGDSAC IPT+T+ +SCL+TI SWT+ LAK+LNVCGLMNCQYAIT SGDV+LLEANPRA
Sbjct: 870  HSGDSACSIPTRTVPASCLETIRSWTVNLAKQLNVCGLMNCQYAITPSGDVFLLEANPRA 929

Query: 946  SRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPKHVSVKEAVLPFEKFQGCDVL 1005
            SRTVPFVSKAIGHPLAKYA+LVMSGK+L DL FTKEVIPK+VSVKEAVLPF KF GCDV 
Sbjct: 930  SRTVPFVSKAIGHPLAKYASLVMSGKTLYDLQFTKEVIPKYVSVKEAVLPFSKFPGCDVF 989

Query: 1006 LGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVFLSLNDLTKPHLERIAKAFLD 1065
            L PEMRSTGEVMGID S+ IAFAKAQIAAGQKLPLSGTVFLSLNDLTKPHLE+IAKAF++
Sbjct: 990  LSPEMRSTGEVMGIDPSYNIAFAKAQIAAGQKLPLSGTVFLSLNDLTKPHLEKIAKAFVE 1049

Query: 1066 IGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVANGQIQMMVITSSGDSLDQID 1125
             GFKI +TSGTAH L L  I  ERVLK+HEGRPHAGDM+ANG IQ+MV+TSS D+LD+ID
Sbjct: 1050 NGFKIAATSGTAHVLNLAKIPAERVLKLHEGRPHAGDMIANGDIQLMVVTSSDDALDRID 1109

Query: 1126 GLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTVTMTALQDFFDVE 1174
            GL LRR  L YKVP++TTV+GALA AEAI SLK+N++ M ALQDF D E
Sbjct: 1110 GLALRRMALDYKVPIVTTVNGALATAEAINSLKANSIKMIALQDFIDGE 1158


>gi|224107361|ref|XP_002314458.1| predicted protein [Populus trichocarpa]
 gi|222863498|gb|EEF00629.1| predicted protein [Populus trichocarpa]
          Length = 1179

 Score = 1953 bits (5059), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 953/1105 (86%), Positives = 1033/1105 (93%), Gaps = 4/1105 (0%)

Query: 87   GKRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLA 146
            GKRTDL+KILILGAGPIVIGQACEFDYSGTQACKAL+EEGY+VILINSNPATIMTDP LA
Sbjct: 78   GKRTDLKKILILGAGPIVIGQACEFDYSGTQACKALREEGYDVILINSNPATIMTDPDLA 137

Query: 147  DRTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLD 206
            DRTY+ P+TPE+VEQV+ KERPDA+LPTMGGQTALNLAVALA +G LEKY VELIGAKL+
Sbjct: 138  DRTYVAPLTPEVVEQVVAKERPDAILPTMGGQTALNLAVALAANGVLEKYNVELIGAKLN 197

Query: 207  AIKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANE-IGEFPLIIRPAFTLGGTGG 265
            AIKKAEDRDLFKQAM+ IG+KTPPSGIG+TL+ECI I+ E IGEFPLIIRPAFTLGG+GG
Sbjct: 198  AIKKAEDRDLFKQAMENIGLKTPPSGIGSTLEECIRISEEVIGEFPLIIRPAFTLGGSGG 257

Query: 266  GIAYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDP 325
            GIAYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDL+DNVVIICSIEN+DP
Sbjct: 258  GIAYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLSDNVVIICSIENIDP 317

Query: 326  MGVHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIE 385
            MGVHTGDSITVAPAQTLTDKEYQRLRDYSI IIREIGVECGGSNVQFAVNPVDGEVMVIE
Sbjct: 318  MGVHTGDSITVAPAQTLTDKEYQRLRDYSIKIIREIGVECGGSNVQFAVNPVDGEVMVIE 377

Query: 386  MNPRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIP 445
            MNPRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYV   IP
Sbjct: 378  MNPRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYV---IP 434

Query: 446  RFAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWD 505
            RFAFEKFPGS+P LTTQMKSVGE+MALGRTFQESFQKA+RSLECG+SGWGC+ V ELDWD
Sbjct: 435  RFAFEKFPGSQPTLTTQMKSVGESMALGRTFQESFQKAVRSLECGYSGWGCAQVAELDWD 494

Query: 506  WEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQS 565
             EQLKY+LRVPNPDR+ AIYAAMK+GMKVDEIHELSF+DKWFLTQ KEL+DVEQ+L+T+S
Sbjct: 495  LEQLKYNLRVPNPDRIHAIYAAMKRGMKVDEIHELSFVDKWFLTQLKELVDVEQYLMTRS 554

Query: 566  VSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANT 625
            +S++TKDDF EVK+ G+SDKQIAFA KSTEKEVR +R+S GV PSYKRVDTCAAEFEANT
Sbjct: 555  LSHLTKDDFIEVKKHGYSDKQIAFAIKSTEKEVRSQRISFGVTPSYKRVDTCAAEFEANT 614

Query: 626  PYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNS 685
            PYMYSSYD ECESAPT+KKKVLILGGGPNRIGQGIEFDYCCCH SFSLQSAGYETIMMNS
Sbjct: 615  PYMYSSYDAECESAPTKKKKVLILGGGPNRIGQGIEFDYCCCHASFSLQSAGYETIMMNS 674

Query: 686  NPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEH 745
            NPETVSTDYDTSDRLYFEPLTVEDVLNVI+LERP+GII+QFGGQTPLKL+LPI  YLD+H
Sbjct: 675  NPETVSTDYDTSDRLYFEPLTVEDVLNVIELERPDGIIIQFGGQTPLKLALPIQHYLDKH 734

Query: 746  RLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEI 805
            +  SASG G VRIWGTSPDSIDAAEDRERFN IIKEL+IEQPKGGIAKSEADALAIA +I
Sbjct: 735  KPLSASGAGHVRIWGTSPDSIDAAEDRERFNVIIKELNIEQPKGGIAKSEADALAIAADI 794

Query: 806  GYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALA 865
            GYPVVVRPSYVLGGRAMEIVY+D+ LV YLENAVEVDP+RPVLIDKYLSDA+EIDVDALA
Sbjct: 795  GYPVVVRPSYVLGGRAMEIVYSDDKLVKYLENAVEVDPQRPVLIDKYLSDAVEIDVDALA 854

Query: 866  DSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMN 925
            DS G+VVIGG+MEHIEQAGVHSGDSAC++PT+TISSSCL TI  WT KLAK LNVCGLMN
Sbjct: 855  DSHGDVVIGGVMEHIEQAGVHSGDSACILPTQTISSSCLTTIQLWTTKLAKSLNVCGLMN 914

Query: 926  CQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPK 985
            CQYAIT  GDV+LLEANPRASRT+PFVSKAIGHPLAKYAALVMSGKSLN++GFTKEVIP 
Sbjct: 915  CQYAITMGGDVFLLEANPRASRTIPFVSKAIGHPLAKYAALVMSGKSLNEIGFTKEVIPA 974

Query: 986  HVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVF 1045
            HV+VKEAVLPF+KF GCDVLLGPEMRSTGEVMGID    IAFAKAQIAAGQKLPLSGTVF
Sbjct: 975  HVAVKEAVLPFDKFPGCDVLLGPEMRSTGEVMGIDYLVAIAFAKAQIAAGQKLPLSGTVF 1034

Query: 1046 LSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVA 1105
            LSLNDLTK HLER+AKAFL +GF+IVSTSGTAHFLELKGI+V+RVLKMHEGRPHAGD++A
Sbjct: 1035 LSLNDLTKSHLERLAKAFLGLGFRIVSTSGTAHFLELKGISVDRVLKMHEGRPHAGDILA 1094

Query: 1106 NGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTVTMT 1165
            NGQIQ+MVITSSGDSLDQIDG +LRR  LAYK+P+ITTVSGALA A AI  LK+  + + 
Sbjct: 1095 NGQIQLMVITSSGDSLDQIDGRQLRRMALAYKIPIITTVSGALATANAIEKLKTCKIEVM 1154

Query: 1166 ALQDFFDVETASGSSENLQSVSTSL 1190
            ALQDFF+VE     S++LQ  S+SL
Sbjct: 1155 ALQDFFNVEPQKDDSKSLQPASSSL 1179


>gi|357453751|ref|XP_003597156.1| Carbamoyl-phosphate synthase large chain [Medicago truncatula]
 gi|355486204|gb|AES67407.1| Carbamoyl-phosphate synthase large chain [Medicago truncatula]
          Length = 1166

 Score = 1944 bits (5036), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 925/1085 (85%), Positives = 1011/1085 (93%), Gaps = 1/1085 (0%)

Query: 87   GKRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLA 146
            GKRTD++KILILGAGPIVIGQACEFDYSGTQACKAL+EEGYEVILINSNPATIMTDP  A
Sbjct: 77   GKRTDIKKILILGAGPIVIGQACEFDYSGTQACKALREEGYEVILINSNPATIMTDPETA 136

Query: 147  DRTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLD 206
            DRTYITPMTPELVEQVLE ERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKL+
Sbjct: 137  DRTYITPMTPELVEQVLESERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLE 196

Query: 207  AIKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGG 266
            AIKKAEDR+LFKQAMK IG+KTPPSG  +TL+EC+ IAN+I EFPLI+RPAFTLGGTGGG
Sbjct: 197  AIKKAEDRELFKQAMKNIGIKTPPSGTCSTLEECMQIANQI-EFPLIVRPAFTLGGTGGG 255

Query: 267  IAYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPM 326
            IAYN+E+   ICKAG+AASLT+QVL+EKSLLGWKEYELEVMRDLADNVVIICSIEN+DPM
Sbjct: 256  IAYNREDLMEICKAGIAASLTNQVLIEKSLLGWKEYELEVMRDLADNVVIICSIENIDPM 315

Query: 327  GVHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEM 386
            GVHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEM
Sbjct: 316  GVHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEM 375

Query: 387  NPRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPR 446
            NPRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPR
Sbjct: 376  NPRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPR 435

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            FAFEKFPGS+P+LTTQMKSVGE+MA+GRTFQESFQKA+RSLE G +GWGC  VKELD+DW
Sbjct: 436  FAFEKFPGSQPILTTQMKSVGESMAVGRTFQESFQKAVRSLEHGHAGWGCGAVKELDYDW 495

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
            EQLKY+LRVPNP+R+ A+YAAMKKGM++DEI ELSFID+WFL Q KEL+DVE FL++ ++
Sbjct: 496  EQLKYNLRVPNPERIHAVYAAMKKGMQIDEIFELSFIDRWFLRQLKELVDVENFLMSNNL 555

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
            S++T  DFYEVKRRGFSDKQIAFATKS EKEVR +RLSLGV+P+YKRVDTCAAEFEANTP
Sbjct: 556  SDLTDLDFYEVKRRGFSDKQIAFATKSNEKEVRSRRLSLGVVPAYKRVDTCAAEFEANTP 615

Query: 627  YMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSN 686
            YMYSSYDFECESAPT +KKVLILGGGPNRIGQGIEFDYCCCH SFSLQ+AGYETIM+NSN
Sbjct: 616  YMYSSYDFECESAPTTRKKVLILGGGPNRIGQGIEFDYCCCHASFSLQAAGYETIMVNSN 675

Query: 687  PETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHR 746
            PETVSTDYDTSDRLYFEPLTVEDVLN+IDLERP+GIIVQFGGQTPLKL+LP+ +YLDEH+
Sbjct: 676  PETVSTDYDTSDRLYFEPLTVEDVLNIIDLERPDGIIVQFGGQTPLKLALPLQRYLDEHK 735

Query: 747  LPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEIG 806
               ASGDG VRIWGTSPDSID AEDRERFN ++ EL IE PKGGIA+SEADALAIA EIG
Sbjct: 736  PACASGDGHVRIWGTSPDSIDVAEDRERFNVMLHELQIEHPKGGIARSEADALAIAAEIG 795

Query: 807  YPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALAD 866
            YPVVVRPSYVLGGRAMEIVY+DE LVTYLE AVEVDPERPVLIDKYLSDA EID+DALAD
Sbjct: 796  YPVVVRPSYVLGGRAMEIVYSDERLVTYLETAVEVDPERPVLIDKYLSDACEIDIDALAD 855

Query: 867  SCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNC 926
            S GNVVIGGIMEHIEQAG+HSGDSAC IPT+T+SSS L+TI SWT KLAK+LNV GLMNC
Sbjct: 856  SQGNVVIGGIMEHIEQAGIHSGDSACSIPTRTVSSSSLETIRSWTEKLAKKLNVVGLMNC 915

Query: 927  QYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPKH 986
            QYAIT SG+V+LLEANPRASRTVPFVSKAIGHPLAKYA+LVMSGKSL+D+ FTKEVIPKH
Sbjct: 916  QYAITPSGNVFLLEANPRASRTVPFVSKAIGHPLAKYASLVMSGKSLHDIKFTKEVIPKH 975

Query: 987  VSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVFL 1046
            VSVKEAVLPF KF GCD+ L PEMRSTGEVMGID S+ IAFAKAQIAAGQKLPLSG+VFL
Sbjct: 976  VSVKEAVLPFSKFPGCDIFLSPEMRSTGEVMGIDPSYNIAFAKAQIAAGQKLPLSGSVFL 1035

Query: 1047 SLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVAN 1106
            SLNDLTKPHLE+IAKAF+DIGF+IV+T+GTA  L+   I    VLK+HEGRPHAGDM+AN
Sbjct: 1036 SLNDLTKPHLEKIAKAFIDIGFQIVATAGTALALKFCNIPAVLVLKLHEGRPHAGDMIAN 1095

Query: 1107 GQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTVTMTA 1166
            G IQ+MV+TSS D+LD+IDGL LRR  L YKVP++TTV+GALA AEAI+SLKSN++ M A
Sbjct: 1096 GDIQLMVVTSSDDALDRIDGLALRRMALDYKVPIVTTVNGALATAEAIKSLKSNSIKMIA 1155

Query: 1167 LQDFF 1171
            LQDF 
Sbjct: 1156 LQDFI 1160


>gi|222154052|gb|ACM47216.1| plastid carbamoylphosphate synthetase large subunit [Medicago
            truncatula]
          Length = 1167

 Score = 1940 bits (5025), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 925/1086 (85%), Positives = 1011/1086 (93%), Gaps = 2/1086 (0%)

Query: 87   GKRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLA 146
            GKRTD++KILILGAGPIVIGQACEFDYSGTQACKAL+EEGYEVILINSNPATIMTDP  A
Sbjct: 77   GKRTDIKKILILGAGPIVIGQACEFDYSGTQACKALREEGYEVILINSNPATIMTDPETA 136

Query: 147  DRTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLD 206
            DRTYITPMTPELVEQVLE ERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKL+
Sbjct: 137  DRTYITPMTPELVEQVLESERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLE 196

Query: 207  AIKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGG 266
            AIKKAEDR+LFKQAMK IG+KTPPSG  +TL+EC+ IAN+I EFPLI+RPAFTLGGTGGG
Sbjct: 197  AIKKAEDRELFKQAMKNIGIKTPPSGTCSTLEECMQIANQI-EFPLIVRPAFTLGGTGGG 255

Query: 267  IAYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPM 326
            IAYN+E+   ICKAG+AASLT+QVL+EKSLLGWKEYELEVMRDLADNVVIICSIEN+DPM
Sbjct: 256  IAYNREDLMEICKAGIAASLTNQVLIEKSLLGWKEYELEVMRDLADNVVIICSIENIDPM 315

Query: 327  GVHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEM 386
            GVHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEM
Sbjct: 316  GVHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEM 375

Query: 387  NPRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPR 446
            NPRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPR
Sbjct: 376  NPRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPR 435

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            FAFEKFPGS+P+LTTQMKSVGE+MA+GRTFQESFQKA+RSLE G +GWGC  VKELD+DW
Sbjct: 436  FAFEKFPGSQPILTTQMKSVGESMAVGRTFQESFQKAVRSLEHGHAGWGCGAVKELDYDW 495

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
            EQLKY+LRVPNP+R+ A+YAAMKKGM++DEI ELSFID+WFL Q KEL+DVE FL++ ++
Sbjct: 496  EQLKYNLRVPNPERIHAVYAAMKKGMQIDEIFELSFIDRWFLRQLKELVDVENFLMSNNL 555

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
            S++T  DFYEVKRRGFSDKQIAFATKS EKEVR +RLSLGV+P+YKRVDTCAAEFEANTP
Sbjct: 556  SDLTDLDFYEVKRRGFSDKQIAFATKSNEKEVRSRRLSLGVVPAYKRVDTCAAEFEANTP 615

Query: 627  YMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQ-SAGYETIMMNS 685
            YMYSSYDFECESAPT +KKVLILGGGPNRIGQGIEFDYCCCH SFSLQ +AGYETIM+NS
Sbjct: 616  YMYSSYDFECESAPTTRKKVLILGGGPNRIGQGIEFDYCCCHASFSLQQAAGYETIMVNS 675

Query: 686  NPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEH 745
            NPETVSTDYDTSDRLYFEPLTVEDVLN+IDLERP+GIIVQFGGQTPLKL+LP+ +YLDEH
Sbjct: 676  NPETVSTDYDTSDRLYFEPLTVEDVLNIIDLERPDGIIVQFGGQTPLKLALPLQRYLDEH 735

Query: 746  RLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEI 805
            +   ASGDG VRIWGTSPDSID AEDRERFN ++ EL IE PKGGIA+SEADALAIA EI
Sbjct: 736  KPACASGDGHVRIWGTSPDSIDVAEDRERFNVMLHELQIEHPKGGIARSEADALAIAAEI 795

Query: 806  GYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALA 865
            GYPVVVRPSYVLGGRAMEIVY+DE LVTYLE AVEVDPERPVLIDKYLSDA EID+DALA
Sbjct: 796  GYPVVVRPSYVLGGRAMEIVYSDERLVTYLETAVEVDPERPVLIDKYLSDACEIDIDALA 855

Query: 866  DSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMN 925
            DS GNVVIGGIMEHIEQAG+HSGDSAC IPT+T+SSS L+TI SWT KLAK+LNV GLMN
Sbjct: 856  DSQGNVVIGGIMEHIEQAGIHSGDSACSIPTRTVSSSSLETIRSWTEKLAKKLNVVGLMN 915

Query: 926  CQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPK 985
            CQYAIT SG+V+LLEANPRASRTVPFVSKAIGHPLAKYA+LVMSGKSL+D+ FTKEVIPK
Sbjct: 916  CQYAITPSGNVFLLEANPRASRTVPFVSKAIGHPLAKYASLVMSGKSLHDIKFTKEVIPK 975

Query: 986  HVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVF 1045
            HVSVKEAVLPF KF GCD+ L PEMRSTGEVMGID S+ IAFAKAQIAAGQKLPLSG+VF
Sbjct: 976  HVSVKEAVLPFSKFPGCDIFLSPEMRSTGEVMGIDPSYNIAFAKAQIAAGQKLPLSGSVF 1035

Query: 1046 LSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVA 1105
            LSLNDLTKPHLE+IAKAF+DIGF+IV+T+GTA  L+   I    VLK+HEGRPHAGDM+A
Sbjct: 1036 LSLNDLTKPHLEKIAKAFIDIGFQIVATAGTALALKFCNIPAVLVLKLHEGRPHAGDMIA 1095

Query: 1106 NGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTVTMT 1165
            NG IQ+MV+TSS D+LD+IDGL LRR  L YKVP++TTV+GALA AEAI+SLKSN++ M 
Sbjct: 1096 NGDIQLMVVTSSDDALDRIDGLALRRMALDYKVPIVTTVNGALATAEAIKSLKSNSIKMI 1155

Query: 1166 ALQDFF 1171
            ALQDF 
Sbjct: 1156 ALQDFI 1161


>gi|413950407|gb|AFW83056.1| hypothetical protein ZEAMMB73_585570 [Zea mays]
          Length = 1174

 Score = 1900 bits (4923), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 894/1127 (79%), Positives = 1012/1127 (89%)

Query: 51   PQLTRYSRSRVRASSAKIDSSAELSNGAASSKDQKLGKRTDLRKILILGAGPIVIGQACE 110
            P   R +   VRA++A  D  A ++     +   K G+   ++KI+ILGAGPIVIGQACE
Sbjct: 37   PAPRRAAALSVRANAASTDGDAAVTVRRFPAAPTKAGRLAGVKKIMILGAGPIVIGQACE 96

Query: 111  FDYSGTQACKALKEEGYEVILINSNPATIMTDPGLADRTYITPMTPELVEQVLEKERPDA 170
            FDYSGTQACKAL EEGYEV+L+NSNPATIMTDPGLA RTYI PMTP LVE++++ ERPDA
Sbjct: 97   FDYSGTQACKALAEEGYEVVLVNSNPATIMTDPGLAHRTYIGPMTPPLVERIIDAERPDA 156

Query: 171  LLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDAIKKAEDRDLFKQAMKTIGVKTPP 230
            LLPTMGGQTALNLAV+LA+SGAL++ GV LIGA L AI+ AEDR LFKQAM  IG+KTPP
Sbjct: 157  LLPTMGGQTALNLAVSLADSGALDRLGVRLIGASLPAIRAAEDRQLFKQAMDRIGLKTPP 216

Query: 231  SGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGIAYNKEEFEAICKAGLAASLTSQV 290
            SGIG TL+EC++IA +IGE PLI+RPAFTLGGTGGGIAYNK EFE IC+AGLAAS T QV
Sbjct: 217  SGIGTTLEECLAIAEDIGELPLIVRPAFTLGGTGGGIAYNKAEFEDICRAGLAASHTQQV 276

Query: 291  LVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMGVHTGDSITVAPAQTLTDKEYQRL 350
            LVEKSLLGWKEYELEVMRD+ADNVVIICSIEN+DPMGVHTGDSITVAPAQTLTDKEYQRL
Sbjct: 277  LVEKSLLGWKEYELEVMRDMADNVVIICSIENIDPMGVHTGDSITVAPAQTLTDKEYQRL 336

Query: 351  RDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMNPRVSRSSALASKATGFPIAKMAA 410
            RDYS+AIIREIGVECGGSNVQFAVNP DGEVMVIEMNPRVSRSSALASKATGFPIAKMAA
Sbjct: 337  RDYSVAIIREIGVECGGSNVQFAVNPADGEVMVIEMNPRVSRSSALASKATGFPIAKMAA 396

Query: 411  KLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRFAFEKFPGSEPLLTTQMKSVGEAM 470
            KLSVGY+LDQIPNDITKKTPASFEPSIDYVVTKIPRFAFEKFPGSEP+LTTQMKSVGEAM
Sbjct: 397  KLSVGYTLDQIPNDITKKTPASFEPSIDYVVTKIPRFAFEKFPGSEPILTTQMKSVGEAM 456

Query: 471  ALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDWEQLKYSLRVPNPDRMQAIYAAMKK 530
            ALGRTFQESFQKA+RSLE GF+GWGC  +KELDWDWE++KYSLRVPNPDR+ AIYAA KK
Sbjct: 457  ALGRTFQESFQKAVRSLETGFAGWGCGPIKELDWDWEKIKYSLRVPNPDRIHAIYAAFKK 516

Query: 531  GMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSVSNMTKDDFYEVKRRGFSDKQIAFA 590
            GM+V++IHE+SFIDKWFLT+ K L+DVEQFLL++S+  ++KDDFY+VK+RGFSDKQIAFA
Sbjct: 517  GMRVEDIHEISFIDKWFLTELKGLVDVEQFLLSKSLDQLSKDDFYQVKKRGFSDKQIAFA 576

Query: 591  TKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTPYMYSSYDFECESAPTQKKKVLILG 650
            T S+E +VR +RL+LGV P+YKRVDTCAAEFEANTPYMYSSY++ECES+PT +KKVLILG
Sbjct: 577  TSSSESDVRSRRLTLGVTPTYKRVDTCAAEFEANTPYMYSSYEYECESSPTNRKKVLILG 636

Query: 651  GGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSNPETVSTDYDTSDRLYFEPLTVEDV 710
            GGPNRIGQGIEFDYCCCH SF+L+ AGYETIMMNSNPETVSTDYDTSDRLYFEPLTVEDV
Sbjct: 637  GGPNRIGQGIEFDYCCCHASFALREAGYETIMMNSNPETVSTDYDTSDRLYFEPLTVEDV 696

Query: 711  LNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHRLPSASGDGLVRIWGTSPDSIDAAE 770
             NV+DLERP+GIIVQFGGQTPLKL+LPI QY++E+++ SASG G V+IWGTSPDSIDA+E
Sbjct: 697  SNVLDLERPDGIIVQFGGQTPLKLALPIQQYIEENKMVSASGTGNVKIWGTSPDSIDASE 756

Query: 771  DRERFNAIIKELSIEQPKGGIAKSEADALAIAKEIGYPVVVRPSYVLGGRAMEIVYTDET 830
            DR+RFNAI++EL IEQPKGGIA+SE+DALAIA E+GYPVVVRPSYVLGGRAMEIVY DE 
Sbjct: 757  DRKRFNAILEELQIEQPKGGIARSESDALAIASEVGYPVVVRPSYVLGGRAMEIVYNDEK 816

Query: 831  LVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALADSCGNVVIGGIMEHIEQAGVHSGDS 890
            L+ YL  AV+VDPERPVL+DKYL DA+EIDVDALAD+ GNVVIGGIMEHIEQAG+HSGDS
Sbjct: 817  LIKYLATAVQVDPERPVLVDKYLIDAVEIDVDALADTAGNVVIGGIMEHIEQAGIHSGDS 876

Query: 891  ACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNCQYAITTSGDVYLLEANPRASRTVP 950
            AC +PT+T+S+ CL+ I SWT KLAKRLNVCGLMNCQYAI+TSGDV+LLEANPRASRTVP
Sbjct: 877  ACSLPTRTVSAQCLEVIRSWTTKLAKRLNVCGLMNCQYAISTSGDVFLLEANPRASRTVP 936

Query: 951  FVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPKHVSVKEAVLPFEKFQGCDVLLGPEM 1010
            FVSKAIGHPLAKYA+L+MSG +L +LGFTKEVIPKHVSVKEAVLPFEKFQGCD+LLGPEM
Sbjct: 937  FVSKAIGHPLAKYASLIMSGVTLPELGFTKEVIPKHVSVKEAVLPFEKFQGCDILLGPEM 996

Query: 1011 RSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVFLSLNDLTKPHLERIAKAFLDIGFKI 1070
            RSTGEVMGID  F  AFAKAQIAAGQKLPLSGTVFLSLNDLTK HL  I   F ++GF I
Sbjct: 997  RSTGEVMGIDYEFSGAFAKAQIAAGQKLPLSGTVFLSLNDLTKRHLAEIGSGFRELGFSI 1056

Query: 1071 VSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVANGQIQMMVITSSGDSLDQIDGLKLR 1130
            ++TSGTA  L+L+G+ VE VLK+HEGRP+A DM+ NGQIQ+MVITSSGD+LD  DGL+LR
Sbjct: 1057 IATSGTAKVLQLEGVPVEPVLKIHEGRPNARDMLKNGQIQIMVITSSGDALDSKDGLQLR 1116

Query: 1131 RRGLAYKVPVITTVSGALANAEAIRSLKSNTVTMTALQDFFDVETAS 1177
            R  LAYKVP+ITTV GA A+ +AI+SLK  ++ + ALQD+F    AS
Sbjct: 1117 RLALAYKVPIITTVDGARASIDAIKSLKDKSIEILALQDYFQTADAS 1163


>gi|414881485|tpg|DAA58616.1| TPA: hypothetical protein ZEAMMB73_472472 [Zea mays]
          Length = 1168

 Score = 1897 bits (4915), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 895/1105 (80%), Positives = 1008/1105 (91%), Gaps = 3/1105 (0%)

Query: 85   KLGKRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPG 144
            K G  + ++KI+ILGAGPIVIGQACEFDYSGTQACKAL EEGYEV+L+NSNPATIMTDPG
Sbjct: 65   KAGGLSGVKKIMILGAGPIVIGQACEFDYSGTQACKALVEEGYEVVLVNSNPATIMTDPG 124

Query: 145  LADRTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAK 204
            LA RTYI PMTP LVE++++ ERPDALLPTMGGQTALNLAV+LA+SGAL++ GV LIGA 
Sbjct: 125  LAHRTYIGPMTPTLVERIIDAERPDALLPTMGGQTALNLAVSLADSGALDRLGVRLIGAS 184

Query: 205  LDAIKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTG 264
            L AI+ AEDR LFKQAM  IG++TPPSGIG TL+EC++IA +IGEFPLI+RPAFTLGGTG
Sbjct: 185  LPAIRAAEDRQLFKQAMDRIGLQTPPSGIGTTLEECLTIAEDIGEFPLIVRPAFTLGGTG 244

Query: 265  GGIAYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVD 324
            GGIAYN+ EFE IC+AGL AS T QVLVEKSLLGWKEYELEVMRD+ADNVVIICSIEN+D
Sbjct: 245  GGIAYNRAEFEDICRAGLTASHTQQVLVEKSLLGWKEYELEVMRDMADNVVIICSIENID 304

Query: 325  PMGVHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVI 384
            PMGVHTGDSITVAPAQTLTDKEYQRLRDYS+AIIREIGVECGGSNVQFAVNP DGEVMVI
Sbjct: 305  PMGVHTGDSITVAPAQTLTDKEYQRLRDYSVAIIREIGVECGGSNVQFAVNPADGEVMVI 364

Query: 385  EMNPRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKI 444
            EMNPRVSRSSALASKATGFPIAKMAAKLSVGY+LDQIPNDITKKTPASFEPSIDYVVTKI
Sbjct: 365  EMNPRVSRSSALASKATGFPIAKMAAKLSVGYTLDQIPNDITKKTPASFEPSIDYVVTKI 424

Query: 445  PRFAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDW 504
            PRFAFEKFPGSEP+LTTQMKSVGEAMALGRTFQESFQKA+RSLE GF+GWGC  +KELDW
Sbjct: 425  PRFAFEKFPGSEPILTTQMKSVGEAMALGRTFQESFQKAVRSLETGFAGWGCGPIKELDW 484

Query: 505  DWEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQ 564
            DWEQ+KYSLRVPNPDR+ AIYAA KKGM+V++IHE+SFIDKWFLT+ +EL+DVEQFLL++
Sbjct: 485  DWEQIKYSLRVPNPDRIHAIYAAFKKGMRVEDIHEISFIDKWFLTELRELVDVEQFLLSR 544

Query: 565  SVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEAN 624
            S+  ++KDDFY+VKRRGFSDKQIAFAT S+E +VR +RL+LGV PSYKRVDTCAAEFEAN
Sbjct: 545  SLDQLSKDDFYQVKRRGFSDKQIAFATSSSESDVRSRRLALGVTPSYKRVDTCAAEFEAN 604

Query: 625  TPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMN 684
            TPYMYSSY++ECESAPT KKKVLILGGGPNRIGQGIEFDYCCCH SF+L+ AGYETIMMN
Sbjct: 605  TPYMYSSYEYECESAPTNKKKVLILGGGPNRIGQGIEFDYCCCHASFALREAGYETIMMN 664

Query: 685  SNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDE 744
            SNPETVSTDYDTSDRLYFEPLTVEDVLNV+DLERP+GIIVQFGGQTPLKL+LPI QY++E
Sbjct: 665  SNPETVSTDYDTSDRLYFEPLTVEDVLNVLDLERPDGIIVQFGGQTPLKLALPIQQYIEE 724

Query: 745  HRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKE 804
            +++ SASG G V+IWGTSPDSIDAAEDR+RFNAI++EL IEQPKGGIA+SE+DALAIA E
Sbjct: 725  NKMVSASGTGNVKIWGTSPDSIDAAEDRKRFNAILEELGIEQPKGGIARSESDALAIASE 784

Query: 805  IGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDAL 864
            IGYPVVVRPSYVLGGRAMEIVY DE L+ YL  AV+VDPERPVL+DKYL DA+EIDVDAL
Sbjct: 785  IGYPVVVRPSYVLGGRAMEIVYNDEKLIKYLATAVQVDPERPVLVDKYLIDAVEIDVDAL 844

Query: 865  ADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLM 924
            AD+ GNVVIGGIMEHIEQAG+HSGDSAC +PT+T+S+ CL+ I SWT KLAK LNVCGLM
Sbjct: 845  ADTAGNVVIGGIMEHIEQAGIHSGDSACSLPTRTVSAKCLEVIRSWTTKLAKCLNVCGLM 904

Query: 925  NCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIP 984
            NCQYAI+TSGDV+LLEANPRASRTVPFVSKAIGHPLAKYA+LVMSG +L +LGFT+EVIP
Sbjct: 905  NCQYAISTSGDVFLLEANPRASRTVPFVSKAIGHPLAKYASLVMSGVTLPELGFTEEVIP 964

Query: 985  KHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTV 1044
            KHVSVKEAVLPFEKFQGCD+LLGPEMRSTGEVMGID  F  AFAKAQIAAGQKLPLSGTV
Sbjct: 965  KHVSVKEAVLPFEKFQGCDILLGPEMRSTGEVMGIDYEFSGAFAKAQIAAGQKLPLSGTV 1024

Query: 1045 FLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMV 1104
            FLSLNDLTK HL  I + F ++GF IV+TSGTA  L+L+G+ VE VLK+HEGRP+A DM+
Sbjct: 1025 FLSLNDLTKRHLAEIGRGFRELGFSIVATSGTAKVLQLEGVPVEPVLKIHEGRPNARDML 1084

Query: 1105 ANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTVTM 1164
             NGQIQ+MVITSSGD+LD  DGL+LRR  LAYKVP+ TTV GA A+ +AI+SLK+ ++ +
Sbjct: 1085 KNGQIQIMVITSSGDALDSKDGLQLRRLALAYKVPITTTVDGARASIDAIKSLKNKSIEI 1144

Query: 1165 TALQDFFDVETASGSSENLQSVSTS 1189
             ALQD+F    A   SE+LQ+V+ +
Sbjct: 1145 LALQDYFQTADA---SEDLQAVART 1166


>gi|222618703|gb|EEE54835.1| hypothetical protein OsJ_02282 [Oryza sativa Japonica Group]
          Length = 1172

 Score = 1893 bits (4904), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 893/1101 (81%), Positives = 998/1101 (90%)

Query: 87   GKRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLA 146
            G+   +RKI+ILGAGPIVIGQACEFDYSGTQACKAL EEGYEV+L+NSNPATIMTDP LA
Sbjct: 72   GRLAGVRKIMILGAGPIVIGQACEFDYSGTQACKALAEEGYEVVLVNSNPATIMTDPDLA 131

Query: 147  DRTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLD 206
             RTYI PMTP LVE+++  ERPDALLPTMGGQTALNLAV+LA+SGAL++ GV LIGA L 
Sbjct: 132  HRTYIGPMTPPLVERIIAAERPDALLPTMGGQTALNLAVSLADSGALDRLGVRLIGASLP 191

Query: 207  AIKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGG 266
            AI+ AEDR LFKQAM  IG+KTPPSGIG TL+ECISIA +IGEFPLI+RPAFTLGGTGGG
Sbjct: 192  AIRAAEDRQLFKQAMDRIGLKTPPSGIGTTLEECISIAEDIGEFPLIVRPAFTLGGTGGG 251

Query: 267  IAYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPM 326
            IAYN+ EFE IC+AGLAAS T QVLVEKSLLGWKEYELEVMRD+ADNVVIICSIEN+DPM
Sbjct: 252  IAYNRAEFEDICRAGLAASHTQQVLVEKSLLGWKEYELEVMRDMADNVVIICSIENIDPM 311

Query: 327  GVHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEM 386
            GVHTGDSITVAPAQTLTDKEYQRLRDYS+AIIREIGVECGGSNVQFAVNP DGEVMVIEM
Sbjct: 312  GVHTGDSITVAPAQTLTDKEYQRLRDYSVAIIREIGVECGGSNVQFAVNPADGEVMVIEM 371

Query: 387  NPRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPR 446
            NPRVSRSSALASKATGFPIAKMAAKLSVGY+LDQIPNDITKKTPASFEPSIDYVVTKIPR
Sbjct: 372  NPRVSRSSALASKATGFPIAKMAAKLSVGYTLDQIPNDITKKTPASFEPSIDYVVTKIPR 431

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            FAFEKFPGSEP+LTTQMKSVGEAMALGRTFQESFQKA+RSLE GF+GWGC+ +KELDWDW
Sbjct: 432  FAFEKFPGSEPVLTTQMKSVGEAMALGRTFQESFQKAVRSLETGFAGWGCAPIKELDWDW 491

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
            E+LKYSLRVPNPDR+ AIYAA KKGM++ +IHE+SFIDKWFLT+ KEL+DVEQFL+++ +
Sbjct: 492  EKLKYSLRVPNPDRIHAIYAAFKKGMRIQDIHEISFIDKWFLTELKELVDVEQFLISRGL 551

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
              ++KDDFY+VKRRGFSD QIAFAT S+E +VR +RL+L V P+YKRVDTCAAEFEANTP
Sbjct: 552  DQLSKDDFYQVKRRGFSDTQIAFATSSSETDVRLRRLALEVAPTYKRVDTCAAEFEANTP 611

Query: 627  YMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSN 686
            YMYSSY++ECES PT KKKVLILGGGPNRIGQGIEFDYCCCH SF+L+ AGYETIMMNSN
Sbjct: 612  YMYSSYEYECESVPTNKKKVLILGGGPNRIGQGIEFDYCCCHASFALREAGYETIMMNSN 671

Query: 687  PETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHR 746
            PETVSTDYDTSDRLYFEPLTVEDV NVIDLERP+GIIVQFGGQTPLKL+LPI QYL++ +
Sbjct: 672  PETVSTDYDTSDRLYFEPLTVEDVTNVIDLERPDGIIVQFGGQTPLKLALPIQQYLEDKK 731

Query: 747  LPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEIG 806
            L SASG GLV+IWGTSPDSIDAAEDR+RFNAI++EL IEQPKGGIA+SE+DAL+IA E+G
Sbjct: 732  LVSASGTGLVKIWGTSPDSIDAAEDRKRFNAILEELGIEQPKGGIARSESDALSIASEVG 791

Query: 807  YPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALAD 866
            YPVVVRPSYVLGGRAMEIVY DE L+ YL  AV+VDPERPVL+DKYL DAIEIDVDALAD
Sbjct: 792  YPVVVRPSYVLGGRAMEIVYNDEKLIKYLATAVQVDPERPVLVDKYLIDAIEIDVDALAD 851

Query: 867  SCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNC 926
            S GNVVIGGIMEHIEQAG+HSGDSAC +PT+T+S+ CLD I SWT KLAKRLNVCGLMNC
Sbjct: 852  SVGNVVIGGIMEHIEQAGIHSGDSACSLPTRTVSAKCLDIIRSWTTKLAKRLNVCGLMNC 911

Query: 927  QYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPKH 986
            QYAITTSG+V+LLEANPRASRTVPFVSKAIGHPLAKYA+LVMSG +L +LG+T+EV+PKH
Sbjct: 912  QYAITTSGEVFLLEANPRASRTVPFVSKAIGHPLAKYASLVMSGVTLPELGYTQEVVPKH 971

Query: 987  VSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVFL 1046
            VSVKEAVLPFEKFQGCD+LLGPEMRSTGEVMGID  F  AFAKAQIAAGQKLPL+GTVFL
Sbjct: 972  VSVKEAVLPFEKFQGCDILLGPEMRSTGEVMGIDYEFSGAFAKAQIAAGQKLPLNGTVFL 1031

Query: 1047 SLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVAN 1106
            SLNDLTK HL  I + F ++GF I++TSGTA  L+L+GI VE VLK+HEGRP+A DM+ N
Sbjct: 1032 SLNDLTKRHLAEIGRGFRELGFNIIATSGTAKVLQLEGIPVEPVLKIHEGRPNARDMLKN 1091

Query: 1107 GQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTVTMTA 1166
            GQIQ+MVITSSGD+LD  DGL+LRR  LAYKVP+ITTV GA A  +AI+SLK+ ++   A
Sbjct: 1092 GQIQVMVITSSGDALDSKDGLQLRRLALAYKVPIITTVDGARATIDAIKSLKNKSIETLA 1151

Query: 1167 LQDFFDVETASGSSENLQSVS 1187
            LQD+F    AS + +  QS S
Sbjct: 1152 LQDYFQTTDASQNLQAAQSAS 1172


>gi|242053347|ref|XP_002455819.1| hypothetical protein SORBIDRAFT_03g025720 [Sorghum bicolor]
 gi|241927794|gb|EES00939.1| hypothetical protein SORBIDRAFT_03g025720 [Sorghum bicolor]
          Length = 1171

 Score = 1889 bits (4893), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 893/1129 (79%), Positives = 1018/1129 (90%), Gaps = 6/1129 (0%)

Query: 61   VRASSAKIDSSAELSNGAASSKDQKLGKRTDLRKILILGAGPIVIGQACEFDYSGTQACK 120
            VRAS+   D  A ++     +   K G+   ++KI+ILGAGPIVIGQACEFDYSGTQACK
Sbjct: 47   VRAST---DGDAAVTVRRFPAAPTKAGRLAGVKKIMILGAGPIVIGQACEFDYSGTQACK 103

Query: 121  ALKEEGYEVILINSNPATIMTDPGLADRTYITPMTPELVEQVLEKERPDALLPTMGGQTA 180
            AL EEGYEV+L+NSNPATIMTDP LA RTYI PMTP LVE++++ ERPDALLPTMGGQTA
Sbjct: 104  ALAEEGYEVVLVNSNPATIMTDPDLAHRTYIGPMTPPLVERIIDAERPDALLPTMGGQTA 163

Query: 181  LNLAVALAESGALEKYGVELIGAKLDAIKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDEC 240
            LNLAV+LA+SGAL++ GV LIGA L AI+ AEDR LFKQAM  IG+KTPPSGIG TL+EC
Sbjct: 164  LNLAVSLADSGALDRLGVRLIGASLPAIRAAEDRQLFKQAMDRIGLKTPPSGIGTTLEEC 223

Query: 241  ISIANEIGEFPLIIRPAFTLGGTGGGIAYNKEEFEAICKAGLAASLTSQVLVEKSLLGWK 300
            ++IA +IGEFPLI+RPAFTLGGTGGGIAYN+ EFE IC+AGLAAS T QVLVEKSLLGWK
Sbjct: 224  LAIAEDIGEFPLIVRPAFTLGGTGGGIAYNRAEFEDICRAGLAASHTQQVLVEKSLLGWK 283

Query: 301  EYELEVMRDLADNVVIICSIENVDPMGVHTGDSITVAPAQTLTDKEYQRLRDYSIAIIRE 360
            EYELEVMRD+ADNVVIICSIEN+DPMGVHTGDSITVAPAQTLTDKEYQRLRDYS+AIIRE
Sbjct: 284  EYELEVMRDMADNVVIICSIENIDPMGVHTGDSITVAPAQTLTDKEYQRLRDYSVAIIRE 343

Query: 361  IGVECGGSNVQFAVNPVDGEVMVIEMNPRVSRSSALASKATGFPIAKMAAKLSVGYSLDQ 420
            IGVECGGSNVQFAVNP DGEVM+IEMNPRVSRSSALASKATGFPIAKMAAKLSVGY+LDQ
Sbjct: 344  IGVECGGSNVQFAVNPADGEVMIIEMNPRVSRSSALASKATGFPIAKMAAKLSVGYTLDQ 403

Query: 421  IPNDITKKTPASFEPSIDYVVTKIPRFAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESF 480
            IPNDITKKTPASFEPSIDYVVTKIPRFAFEKFPGSEP+LTTQMKSVGEAMALGRTFQESF
Sbjct: 404  IPNDITKKTPASFEPSIDYVVTKIPRFAFEKFPGSEPVLTTQMKSVGEAMALGRTFQESF 463

Query: 481  QKALRSLECGFSGWGCSNVKELDWDWEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHEL 540
            QKA+RSLE GF+GWGC  +KELDWDWE++KYSLRVPNPDR+ AIYAA KKGM+V +IHE+
Sbjct: 464  QKAVRSLETGFAGWGCGPIKELDWDWEKIKYSLRVPNPDRIHAIYAAFKKGMRVQDIHEI 523

Query: 541  SFIDKWFLTQFKELIDVEQFLLTQSVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVRE 600
            SFIDKWFLT+ KEL+DVEQFL+++S+  ++KDDFY+VKR+GFSDKQIAFAT S+E +VR 
Sbjct: 524  SFIDKWFLTELKELVDVEQFLVSRSLDQLSKDDFYQVKRKGFSDKQIAFATSSSESDVRS 583

Query: 601  KRLSLGVIPSYKRVDTCAAEFEANTPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGI 660
            +RL+LG+ P+YKRVDTCAAEFEANTPYMYSSY++ECESAPT +KKVLILGGGPNRIGQGI
Sbjct: 584  RRLALGIAPTYKRVDTCAAEFEANTPYMYSSYEYECESAPTNRKKVLILGGGPNRIGQGI 643

Query: 661  EFDYCCCHTSFSLQSAGYETIMMNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPE 720
            EFDYCCCH SF+L+ AGYETIMMNSNPETVSTDYDTSDRLYFEPLTVEDV NV+DLERP+
Sbjct: 644  EFDYCCCHASFALREAGYETIMMNSNPETVSTDYDTSDRLYFEPLTVEDVSNVLDLERPD 703

Query: 721  GIIVQFGGQTPLKLSLPIHQYLDEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIK 780
            GIIVQFGGQTPLKL+LPI +Y++E++L SASG G V+IWGTSPDSIDAAEDR+RFNAI++
Sbjct: 704  GIIVQFGGQTPLKLALPIQRYIEENKLVSASGTGNVKIWGTSPDSIDAAEDRKRFNAILE 763

Query: 781  ELSIEQPKGGIAKSEADALAIAKEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVE 840
            EL IEQPKGGIA+SE+DALAIA EIGYPVVVRPSYVLGGRAMEIVY DE L+ YL  AV+
Sbjct: 764  ELGIEQPKGGIARSESDALAIASEIGYPVVVRPSYVLGGRAMEIVYNDEKLIKYLATAVQ 823

Query: 841  VDPERPVLIDKYLSDAIEIDVDALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTIS 900
            VDPERPVL+DKYL DA+EIDVDALAD+ GNVVIGGIMEHIEQAG+HSGDSAC +PT+T+S
Sbjct: 824  VDPERPVLVDKYLIDAVEIDVDALADTAGNVVIGGIMEHIEQAGIHSGDSACSLPTRTVS 883

Query: 901  SSCLDTISSWTIKLAKRLNVCGLMNCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPL 960
            + CL+ I SWT KLAKRLNVCGLMNCQYAI+TSGDV+LLEANPRASRTVPFVSKAIGHPL
Sbjct: 884  AQCLEVIRSWTTKLAKRLNVCGLMNCQYAISTSGDVFLLEANPRASRTVPFVSKAIGHPL 943

Query: 961  AKYAALVMSGKSLNDLGFTKEVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGID 1020
            AKYA+LVMSG +L +LGFTKEV+PKHVSVKEAVLPFEKFQGCD+LLGPEMRSTGEVMGID
Sbjct: 944  AKYASLVMSGVTLPELGFTKEVVPKHVSVKEAVLPFEKFQGCDILLGPEMRSTGEVMGID 1003

Query: 1021 MSFPIAFAKAQIAAGQKLPLSGTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFL 1080
              F  AFAKAQIAAGQ+LP+SGTVFLSLNDLTK HL  I + F ++GF I++TSGTA  L
Sbjct: 1004 YEFSGAFAKAQIAAGQRLPVSGTVFLSLNDLTKRHLAEIGRGFRELGFNIIATSGTAKVL 1063

Query: 1081 ELKGIAVERVLKMHEGRPHAGDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPV 1140
            +L+G+ VE VLK+HEGRP+A DM+ NGQIQ+MVITSSGD+LD  DGL+LRR  LAYKVP+
Sbjct: 1064 QLEGVPVEPVLKIHEGRPNARDMLKNGQIQIMVITSSGDALDSKDGLQLRRLALAYKVPI 1123

Query: 1141 ITTVSGALANAEAIRSLKSNTVTMTALQDFFDVETASGSSENLQSVSTS 1189
            ITTV GA A+ +AI+SLK+ ++   ALQD+F  +TA  +S +LQ+ + +
Sbjct: 1124 ITTVDGARASIDAIKSLKNKSIETLALQDYF--QTAD-TSADLQAAAQT 1169


>gi|357135260|ref|XP_003569229.1| PREDICTED: carbamoyl-phosphate synthase large chain-like
            [Brachypodium distachyon]
          Length = 1172

 Score = 1883 bits (4877), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 893/1129 (79%), Positives = 1010/1129 (89%), Gaps = 10/1129 (0%)

Query: 53   LTRYSRSRVRASSAKIDSSAELSNGAA----------SSKDQKLGKRTDLRKILILGAGP 102
            L  + R     SS +  S+   SNGAA          +++  K GK   ++KI+ILGAGP
Sbjct: 28   LLPFPRRHHHGSSRRGLSARASSNGAAQDPSVTVRHFAAEPTKGGKLAGVKKIMILGAGP 87

Query: 103  IVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLADRTYITPMTPELVEQV 162
            IVIGQACEFDYSGTQACKAL EEGYEV+L+NSNPATIMTDP LA RTYI PMTP LVE +
Sbjct: 88   IVIGQACEFDYSGTQACKALVEEGYEVVLVNSNPATIMTDPDLAHRTYIGPMTPPLVEGI 147

Query: 163  LEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDAIKKAEDRDLFKQAMK 222
            + +ERPDALLPTMGGQTALNLAV+LAESGAL++ GV LIGA L AI+ AEDR LFKQAM 
Sbjct: 148  IAQERPDALLPTMGGQTALNLAVSLAESGALDRLGVRLIGASLPAIRAAEDRQLFKQAMD 207

Query: 223  TIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGIAYNKEEFEAICKAGL 282
             IG+KTPPSGIG TL+EC+SIA +IGEFPLI+RPAFTLGGTGGGIAYN+ EFE IC++GL
Sbjct: 208  RIGLKTPPSGIGTTLEECLSIAKDIGEFPLIVRPAFTLGGTGGGIAYNRAEFEDICRSGL 267

Query: 283  AASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMGVHTGDSITVAPAQTL 342
            AAS T QVLVEKSLLGWKEYELEVMRD+ADNVVIICSIEN+DPMGVHTGDSITVAPAQTL
Sbjct: 268  AASHTQQVLVEKSLLGWKEYELEVMRDMADNVVIICSIENIDPMGVHTGDSITVAPAQTL 327

Query: 343  TDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMNPRVSRSSALASKATG 402
            TDKEYQRLRD+S+AIIREIGVECGGSNVQFAVNP DGEVMVIEMNPRVSRSSALASKATG
Sbjct: 328  TDKEYQRLRDHSVAIIREIGVECGGSNVQFAVNPADGEVMVIEMNPRVSRSSALASKATG 387

Query: 403  FPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRFAFEKFPGSEPLLTTQ 462
            FPIAKMAAKLSVGY+LDQIPNDITKKTPASFEPSIDYVVTKIPRFAFEKFPGSEP+LTTQ
Sbjct: 388  FPIAKMAAKLSVGYTLDQIPNDITKKTPASFEPSIDYVVTKIPRFAFEKFPGSEPILTTQ 447

Query: 463  MKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDWEQLKYSLRVPNPDRMQ 522
            MKSVGE+MALGRTFQESFQKA+RSLE GF+GWGC+ VKELDWDWE++KYSLRVPNP+R+ 
Sbjct: 448  MKSVGESMALGRTFQESFQKAVRSLETGFAGWGCAPVKELDWDWEKIKYSLRVPNPERIH 507

Query: 523  AIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSVSNMTKDDFYEVKRRGF 582
            AIYAA KKGM+V++IHE+SFIDKWFLT+ KEL+DVEQFL+++++  ++KDDFY+VKRRGF
Sbjct: 508  AIYAAFKKGMRVEDIHEISFIDKWFLTELKELVDVEQFLISRNLDQLSKDDFYQVKRRGF 567

Query: 583  SDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTPYMYSSYDFECESAPTQ 642
            SDKQIAFAT S+E +VR +R +LGV P+YKRVDTCAAEFEANTPYMYSSY++ECESAPT 
Sbjct: 568  SDKQIAFATSSSESDVRARRSALGVTPTYKRVDTCAAEFEANTPYMYSSYEYECESAPTS 627

Query: 643  KKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSNPETVSTDYDTSDRLYF 702
            +KKVLILGGGPNRIGQGIEFDYCCCH SF+L+ AGYETIMMNSNPETVSTDYDTSDRLYF
Sbjct: 628  RKKVLILGGGPNRIGQGIEFDYCCCHASFALREAGYETIMMNSNPETVSTDYDTSDRLYF 687

Query: 703  EPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHRLPSASGDGLVRIWGTS 762
            EPLTVEDV NVIDLERP+GIIVQ+GGQTPLKL+LPI ++L+E +L SASG G V+IWGTS
Sbjct: 688  EPLTVEDVTNVIDLERPDGIIVQYGGQTPLKLALPIQRHLEETKLRSASGTGFVKIWGTS 747

Query: 763  PDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEIGYPVVVRPSYVLGGRAM 822
            PDSIDAAEDR+RFNAI++EL IEQPKGGIA+SE+DAL+IA E+GYPVVVRPSYVLGGRAM
Sbjct: 748  PDSIDAAEDRKRFNAILEELGIEQPKGGIARSESDALSIASEVGYPVVVRPSYVLGGRAM 807

Query: 823  EIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALADSCGNVVIGGIMEHIEQ 882
            EIVY DE L+ YL  AV+VDPERPVL+DKYL+DAIEID+DALADS GNVVIGGIMEHIEQ
Sbjct: 808  EIVYNDEKLIKYLATAVQVDPERPVLVDKYLNDAIEIDIDALADSVGNVVIGGIMEHIEQ 867

Query: 883  AGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNCQYAITTSGDVYLLEAN 942
            AG+HSGDSAC +PT+T+S+ CLD I SWT KLAKRLNVCGLMNCQYAIT +G+V+LLEAN
Sbjct: 868  AGIHSGDSACSLPTRTVSTQCLDIIRSWTTKLAKRLNVCGLMNCQYAITPTGEVFLLEAN 927

Query: 943  PRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPKHVSVKEAVLPFEKFQGC 1002
            PRASRTVPFVSKAIGHPLAKYA+L+MSG +L +L FTKEVIPKHVSVKEAVLPFEKFQGC
Sbjct: 928  PRASRTVPFVSKAIGHPLAKYASLIMSGVTLPELRFTKEVIPKHVSVKEAVLPFEKFQGC 987

Query: 1003 DVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVFLSLNDLTKPHLERIAKA 1062
            D+LLGPEMRSTGEVMGID  F  AFAKAQIAAGQKLPLSGTVF+SLNDLTK HL  I + 
Sbjct: 988  DILLGPEMRSTGEVMGIDYEFSGAFAKAQIAAGQKLPLSGTVFISLNDLTKRHLAEIGRG 1047

Query: 1063 FLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVANGQIQMMVITSSGDSLD 1122
            F ++GF IVSTSGTA  L+L+GI V+ VLK+HEGRP+A DM+ NGQIQ+MVITSSGD LD
Sbjct: 1048 FRELGFNIVSTSGTAKVLQLEGIPVDPVLKIHEGRPNARDMLKNGQIQVMVITSSGDDLD 1107

Query: 1123 QIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTVTMTALQDFF 1171
              DGL+LRR  LAYKVP+ITTV GA A  +AI+SLK+ ++ + ALQD+F
Sbjct: 1108 SRDGLQLRRLALAYKVPIITTVDGARATMDAIKSLKNKSIEILALQDYF 1156


>gi|168015903|ref|XP_001760489.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162688186|gb|EDQ74564.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 1117

 Score = 1837 bits (4758), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 871/1085 (80%), Positives = 973/1085 (89%)

Query: 87   GKRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLA 146
            GKR DLRKIL+LGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDP  A
Sbjct: 21   GKRKDLRKILVLGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPETA 80

Query: 147  DRTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLD 206
            DRTYITPMTPELVE+VLEKERPDA+LPTMGGQTALNLA ALAESG L+KY VELIGAKLD
Sbjct: 81   DRTYITPMTPELVEKVLEKERPDAILPTMGGQTALNLACALAESGVLDKYNVELIGAKLD 140

Query: 207  AIKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGG 266
            AI+KAEDRDLFKQAM  IGVKTPPSGI +TLDEC  IA  IGEFPLIIRPAFTLGGTGGG
Sbjct: 141  AIQKAEDRDLFKQAMAKIGVKTPPSGIAHTLDECFVIAERIGEFPLIIRPAFTLGGTGGG 200

Query: 267  IAYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPM 326
            IAYNKEEFEAICKAGL AS+ SQVLVEKSLLGWKEYELEVMRDLADNVVIICSIEN+D M
Sbjct: 201  IAYNKEEFEAICKAGLNASINSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENIDSM 260

Query: 327  GVHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEM 386
            GVHTGDSITVAPAQTLTDKEYQRLRD S+AIIREIGVECGGSNVQFAVNP DGEVMVIEM
Sbjct: 261  GVHTGDSITVAPAQTLTDKEYQRLRDQSVAIIREIGVECGGSNVQFAVNPKDGEVMVIEM 320

Query: 387  NPRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPR 446
            NPRVSRSSALASKATGFPIAKMAAKLSVGY+LDQIPNDITKKTPASFEPSIDYVVTKIPR
Sbjct: 321  NPRVSRSSALASKATGFPIAKMAAKLSVGYTLDQIPNDITKKTPASFEPSIDYVVTKIPR 380

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            FAFEKFPGS+P+LTTQMKSVGEAMA+GRTFQESFQKALRSLE G SGWGC  VKEL+WDW
Sbjct: 381  FAFEKFPGSQPILTTQMKSVGEAMAMGRTFQESFQKALRSLETGHSGWGCEKVKELEWDW 440

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
            +++KY+LRVPNP+RM ++YAAMK+GM +DEI +L+FID WFL+Q +EL+  E+FL +  +
Sbjct: 441  DKIKYNLRVPNPERMYSLYAAMKRGMSLDEIQDLTFIDPWFLSQLRELLQAEKFLESVKL 500

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
            S+++KDD YEVKRRGFSDKQIA+ TK+TE EVR  RL  GV P+YKRVDTCAAEFEANTP
Sbjct: 501  SDLSKDDLYEVKRRGFSDKQIAYVTKTTELEVRAHRLEQGVKPAYKRVDTCAAEFEANTP 560

Query: 627  YMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSN 686
            Y+YSSYD ECESAPT +KKVLILGGGPNRIGQGIEFDYCCCH +FSL   G+ETIMMNSN
Sbjct: 561  YLYSSYDAECESAPTTRKKVLILGGGPNRIGQGIEFDYCCCHAAFSLAETGFETIMMNSN 620

Query: 687  PETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHR 746
            PETVSTDYDTSDRLYFEPLT EDV NVIDLERP+GIIVQFGGQTPLKL++PI  YL++ +
Sbjct: 621  PETVSTDYDTSDRLYFEPLTAEDVCNVIDLERPDGIIVQFGGQTPLKLAVPIQTYLEKFQ 680

Query: 747  LPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEIG 806
              +ASG+G V+IWGT+PDSIDAAEDR+RF+AI+ +L I+ P GGIAKSE DALAIAK +G
Sbjct: 681  PDAASGEGKVKIWGTTPDSIDAAEDRKRFDAILNDLGIKSPSGGIAKSEDDALAIAKRVG 740

Query: 807  YPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALAD 866
            YPVVVRPSYVLGGRAMEIVY D+ L TYLE AVEVDPERPVL+DKYL DA EIDVD+L D
Sbjct: 741  YPVVVRPSYVLGGRAMEIVYNDDKLKTYLETAVEVDPERPVLVDKYLIDATEIDVDSLTD 800

Query: 867  SCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNC 926
            + GNVVIGGIMEHIEQAGVHSGDSAC +P++ I +  L  I  +T KLA+RL V GLMNC
Sbjct: 801  AEGNVVIGGIMEHIEQAGVHSGDSACTLPSQNIGAEALGKIRDYTTKLARRLGVVGLMNC 860

Query: 927  QYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPKH 986
            QYAIT+  +VY++EANPRASRTVPFVSKAIGHPLAKYAALVMSGK+L DL FT+EVIP+H
Sbjct: 861  QYAITSECEVYIIEANPRASRTVPFVSKAIGHPLAKYAALVMSGKTLADLNFTEEVIPRH 920

Query: 987  VSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVFL 1046
            VSVKEAVLPF+KFQGCDVLLGPEMRSTGEVMGID++F  AFAKAQIAA Q LPL+GTVF+
Sbjct: 921  VSVKEAVLPFDKFQGCDVLLGPEMRSTGEVMGIDLNFDKAFAKAQIAANQSLPLTGTVFI 980

Query: 1047 SLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVAN 1106
            S+ND+ K  +  IAK F D+GF+IVST+GTA +L+  G+ VE VLK+HEGRPHA D++AN
Sbjct: 981  SMNDMMKDKVVPIAKGFQDLGFRIVSTTGTASYLQKVGVEVETVLKLHEGRPHAADLLAN 1040

Query: 1107 GQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTVTMTA 1166
            G IQ+M+ITSSGD+LDQIDG +LRR  LAYKVP+ITT++GALA+ +A+  LK + V M A
Sbjct: 1041 GDIQLMIITSSGDALDQIDGRQLRRLALAYKVPIITTIAGALASLQAVSGLKDSPVEMIA 1100

Query: 1167 LQDFF 1171
            LQDFF
Sbjct: 1101 LQDFF 1105


>gi|302799302|ref|XP_002981410.1| hypothetical protein SELMODRAFT_420859 [Selaginella moellendorffii]
 gi|300150950|gb|EFJ17598.1| hypothetical protein SELMODRAFT_420859 [Selaginella moellendorffii]
          Length = 1194

 Score = 1825 bits (4727), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 882/1130 (78%), Positives = 986/1130 (87%), Gaps = 7/1130 (0%)

Query: 49   WPPQLTRYSRSRVRASSAKIDSSA----ELSNGAASSKDQKLGKRTDLRKILILGAGPIV 104
            W P   R++R +  A S + +  +    E S      K +K   RTDL+KILILGAGPIV
Sbjct: 57   WNPSQYRHARKKWEARSVEQEVESLPFIEWSKKGNVCKGKK---RTDLKKILILGAGPIV 113

Query: 105  IGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLADRTYITPMTPELVEQVLE 164
            IGQACEFDYSGTQACKALKEEGYEV+LINSNPATIMTDP LADRTYI PMTPELVEQV+ 
Sbjct: 114  IGQACEFDYSGTQACKALKEEGYEVVLINSNPATIMTDPDLADRTYIAPMTPELVEQVIA 173

Query: 165  KERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDAIKKAEDRDLFKQAMKTI 224
            KERPDA+LPTMGGQTALNLAVALAESGAL+KYGVELIGAKLDAIKKAEDRDLF+QAM+ I
Sbjct: 174  KERPDAVLPTMGGQTALNLAVALAESGALDKYGVELIGAKLDAIKKAEDRDLFRQAMQKI 233

Query: 225  GVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGIAYNKEEFEAICKAGLAA 284
            GVKTPPSGI  TL+EC  IA  IGEFPLIIRPAFTLGGTGGGIAYN+EE E ICKAGL A
Sbjct: 234  GVKTPPSGIATTLEECFQIAETIGEFPLIIRPAFTLGGTGGGIAYNREELETICKAGLTA 293

Query: 285  SLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMGVHTGDSITVAPAQTLTD 344
            S+TSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIEN+DPMGVHTGDSITVAPAQTLTD
Sbjct: 294  SITSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENIDPMGVHTGDSITVAPAQTLTD 353

Query: 345  KEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMNPRVSRSSALASKATGFP 404
            KEYQRLRD +IAIIREIGVECGGSNVQFA+NP DGEVMVIEMNPRVSRSSALASKATGFP
Sbjct: 354  KEYQRLRDQAIAIIREIGVECGGSNVQFAINPEDGEVMVIEMNPRVSRSSALASKATGFP 413

Query: 405  IAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRFAFEKFPGSEPLLTTQMK 464
            IAKMAAKLSVGY+LDQIPNDIT+KTPASFEPSIDYVVTKIPRFAFEKFPGS+ +LTTQMK
Sbjct: 414  IAKMAAKLSVGYTLDQIPNDITRKTPASFEPSIDYVVTKIPRFAFEKFPGSQAILTTQMK 473

Query: 465  SVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDWEQLKYSLRVPNPDRMQAI 524
            SVGEAMA+GRTFQESFQKA+RSLE G SGWGC + KEL WD E+LKY LRVPNPDRM A+
Sbjct: 474  SVGEAMAIGRTFQESFQKAVRSLETGHSGWGCEDSKELKWDIEELKYKLRVPNPDRMYAV 533

Query: 525  YAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSVSNMTKDDFYEVKRRGFSD 584
            YAAMK+GM  +EIHEL+FID WFL + KEL  VE+FL    ++ ++KDD YE+KRRGFSD
Sbjct: 534  YAAMKRGMSAEEIHELTFIDPWFLGELKELFGVEEFLSNTKLTELSKDDMYEIKRRGFSD 593

Query: 585  KQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTPYMYSSYDFECESAPTQKK 644
            +Q+A+ATKS E EVR  R++LGV+P++KRVDTCAAEFEA TPYMYSSYD ECE+    K+
Sbjct: 594  RQVAYATKSAEAEVRAHRIALGVVPAFKRVDTCAAEFEAKTPYMYSSYDDECEANSGSKR 653

Query: 645  KVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSNPETVSTDYDTSDRLYFEP 704
            KVLILGGGPNRIGQGIEFDYCCCH SF L+ AG+ETIMMNSNPETVSTDYDTSDRLYFEP
Sbjct: 654  KVLILGGGPNRIGQGIEFDYCCCHASFVLREAGFETIMMNSNPETVSTDYDTSDRLYFEP 713

Query: 705  LTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHRLPSASGDGLVRIWGTSPD 764
            LT EDVLN+IDLE+P+GIIVQFGGQTPLKL++PI  YLD+ +  SASGDG V+IWGTSPD
Sbjct: 714  LTTEDVLNIIDLEKPDGIIVQFGGQTPLKLAVPIQNYLDDFKPLSASGDGYVKIWGTSPD 773

Query: 765  SIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEIGYPVVVRPSYVLGGRAMEI 824
            SIDA+EDR+RF +I+ +L I+QP GGIA+SE DALAIAK +G+PVVVRPSYVLGGRAMEI
Sbjct: 774  SIDASEDRKRFESILNQLGIKQPPGGIARSEEDALAIAKRVGFPVVVRPSYVLGGRAMEI 833

Query: 825  VYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALADSCGNVVIGGIMEHIEQAG 884
            VY+++ L  YLE AVEVDP RPVL+DKYL+D+ EIDVD LAD  G VVIGGIMEHIEQAG
Sbjct: 834  VYSNDKLKKYLETAVEVDPGRPVLVDKYLTDSSEIDVDCLADGNGGVVIGGIMEHIEQAG 893

Query: 885  VHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNCQYAITTSGDVYLLEANPR 944
            VHSGDSAC IPT+TI +  L TI   T KLAK+LNVCGLMNCQ+AIT SG+VY++EANPR
Sbjct: 894  VHSGDSACSIPTQTIPAVALATIRDATTKLAKKLNVCGLMNCQFAITQSGEVYIIEANPR 953

Query: 945  ASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPKHVSVKEAVLPFEKFQGCDV 1004
            ASRTVPFVSKAIGHPLAKYAALVMSGKSL DLGF++EVIP HVSVKEAVLPF+KFQGCDV
Sbjct: 954  ASRTVPFVSKAIGHPLAKYAALVMSGKSLGDLGFSQEVIPAHVSVKEAVLPFDKFQGCDV 1013

Query: 1005 LLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVFLSLNDLTKPHLERIAKAFL 1064
            LLGPEMRSTGEVMGID SF  AF K+QIAA QKLPL GTVF+SLND TK     IA+ F 
Sbjct: 1014 LLGPEMRSTGEVMGIDYSFDKAFGKSQIAANQKLPLQGTVFISLNDQTKAQAVPIARGFH 1073

Query: 1065 DIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVANGQIQMMVITSSGDSLDQI 1124
             +GF IVSTSGTA FLE +GI VERVLK+HEGRPHAGD+VANGQIQ+M+ITSSGD+LD+ 
Sbjct: 1074 ALGFNIVSTSGTAKFLEEQGIPVERVLKLHEGRPHAGDLVANGQIQLMIITSSGDALDEK 1133

Query: 1125 DGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTVTMTALQDFFDVE 1174
            DG +LRR  LAYKVP++TT++G LAN +A++SLK   V M ALQDFF  +
Sbjct: 1134 DGRQLRRSALAYKVPIVTTIAGGLANLQAVKSLKECPVEMLALQDFFKAD 1183


>gi|302773047|ref|XP_002969941.1| hypothetical protein SELMODRAFT_440891 [Selaginella moellendorffii]
 gi|300162452|gb|EFJ29065.1| hypothetical protein SELMODRAFT_440891 [Selaginella moellendorffii]
          Length = 1194

 Score = 1825 bits (4727), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 881/1130 (77%), Positives = 987/1130 (87%), Gaps = 7/1130 (0%)

Query: 49   WPPQLTRYSRSRVRASSAKIDSSA----ELSNGAASSKDQKLGKRTDLRKILILGAGPIV 104
            W P   R++R +  A SA+ +  +    E S      K +K   RTDL+KILILGAGPIV
Sbjct: 57   WNPSQYRHARKKWEARSAEQEVESLPFIEWSKKGNVCKGKK---RTDLKKILILGAGPIV 113

Query: 105  IGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLADRTYITPMTPELVEQVLE 164
            IGQACEFDYSGTQACKALKEEGYEV+LINSNPATIMTDP LADRTYI PMTPELVEQV+ 
Sbjct: 114  IGQACEFDYSGTQACKALKEEGYEVVLINSNPATIMTDPDLADRTYIAPMTPELVEQVIA 173

Query: 165  KERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDAIKKAEDRDLFKQAMKTI 224
            KERPDA+LPTMGGQTALNLAVALAESGAL+KYGVELIGAKLDAIKKAEDRDLF+QAM+ I
Sbjct: 174  KERPDAVLPTMGGQTALNLAVALAESGALDKYGVELIGAKLDAIKKAEDRDLFRQAMQKI 233

Query: 225  GVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGIAYNKEEFEAICKAGLAA 284
            GVKTPPSGI  TL+EC  IA  IGEFPLIIRPAFTLGGTGGGIAYN+EE E ICK+GL A
Sbjct: 234  GVKTPPSGIATTLEECFQIAETIGEFPLIIRPAFTLGGTGGGIAYNREELETICKSGLTA 293

Query: 285  SLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMGVHTGDSITVAPAQTLTD 344
            S+TSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIEN+DPMGVHTGDSITVAPAQTLTD
Sbjct: 294  SITSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENIDPMGVHTGDSITVAPAQTLTD 353

Query: 345  KEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMNPRVSRSSALASKATGFP 404
            KEYQRLRD +IAIIREIGVECGGSNVQFA+NP DGEVM+IEMNPRVSRSSALASKATGFP
Sbjct: 354  KEYQRLRDQAIAIIREIGVECGGSNVQFAINPEDGEVMIIEMNPRVSRSSALASKATGFP 413

Query: 405  IAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRFAFEKFPGSEPLLTTQMK 464
            IAKMAAKLSVGY+LDQIPNDIT+KTPASFEPSIDYVVTKIPRFAFEKFPGS+ +LTTQMK
Sbjct: 414  IAKMAAKLSVGYTLDQIPNDITRKTPASFEPSIDYVVTKIPRFAFEKFPGSQAILTTQMK 473

Query: 465  SVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDWEQLKYSLRVPNPDRMQAI 524
            SVGEAMA+GRTFQESFQKA+RSLE G SGWGC + KEL WD E+LKY LRVPNPDRM A+
Sbjct: 474  SVGEAMAIGRTFQESFQKAVRSLETGHSGWGCEDSKELKWDIEELKYKLRVPNPDRMYAV 533

Query: 525  YAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSVSNMTKDDFYEVKRRGFSD 584
            YAAMK+GM  +EIHEL+FID WFL + KEL  VE+FL    ++ ++KDD YE+KRRGFSD
Sbjct: 534  YAAMKRGMSAEEIHELTFIDPWFLGELKELFGVEEFLSNTKLTELSKDDMYEIKRRGFSD 593

Query: 585  KQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTPYMYSSYDFECESAPTQKK 644
            +Q+A+ATKS E EVR  R++LGV+P++KRVDTCAAEFEA TPYMYSSYD ECE+    K+
Sbjct: 594  RQVAYATKSAEAEVRAHRIALGVVPAFKRVDTCAAEFEAKTPYMYSSYDDECEANSGSKR 653

Query: 645  KVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSNPETVSTDYDTSDRLYFEP 704
            KVLILGGGPNRIGQGIEFDYCCCH SF L+ AG+ETIMMNSNPETVSTDYDTSDRLYFEP
Sbjct: 654  KVLILGGGPNRIGQGIEFDYCCCHASFVLREAGFETIMMNSNPETVSTDYDTSDRLYFEP 713

Query: 705  LTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHRLPSASGDGLVRIWGTSPD 764
            LT EDVLN+IDLE+P+GIIVQFGGQTPLKL++PI  YLD+ +  SASGDG V+IWGTSPD
Sbjct: 714  LTTEDVLNIIDLEKPDGIIVQFGGQTPLKLAVPIQNYLDDFKPLSASGDGYVKIWGTSPD 773

Query: 765  SIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEIGYPVVVRPSYVLGGRAMEI 824
            SIDA+EDR+RF +I+ +L I+QP GGIA+SE DALAIAK +G+PVVVRPSYVLGGRAMEI
Sbjct: 774  SIDASEDRKRFESILNQLGIKQPPGGIARSEEDALAIAKRVGFPVVVRPSYVLGGRAMEI 833

Query: 825  VYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALADSCGNVVIGGIMEHIEQAG 884
            VY+++ L  YLE AVEVDP RPVL+DKYL+D+ EIDVD LAD  G VVIGGIMEHIEQAG
Sbjct: 834  VYSNDKLKKYLETAVEVDPGRPVLVDKYLTDSSEIDVDCLADGNGGVVIGGIMEHIEQAG 893

Query: 885  VHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNCQYAITTSGDVYLLEANPR 944
            VHSGDSAC IPT+TI +  L TI   T KLAK+LNVCGLMNCQ+AIT SG+VY++EANPR
Sbjct: 894  VHSGDSACSIPTQTIPAVALATIRDATTKLAKKLNVCGLMNCQFAITQSGEVYIIEANPR 953

Query: 945  ASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPKHVSVKEAVLPFEKFQGCDV 1004
            ASRTVPFVSKAIGHPLAKYAALVMSGKSL DLGF++EVIP HVSVKEAVLPF+KFQGCDV
Sbjct: 954  ASRTVPFVSKAIGHPLAKYAALVMSGKSLGDLGFSQEVIPAHVSVKEAVLPFDKFQGCDV 1013

Query: 1005 LLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVFLSLNDLTKPHLERIAKAFL 1064
            LLGPEMRSTGEVMGID SF  AF K+QIAA QKLPL GTVF+SLND TK     IA+ F 
Sbjct: 1014 LLGPEMRSTGEVMGIDYSFDKAFGKSQIAANQKLPLQGTVFISLNDQTKAQAVPIARGFH 1073

Query: 1065 DIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVANGQIQMMVITSSGDSLDQI 1124
             +GF IVSTSGTA FLE +GI VERVLK+HEGRPHAGD+VANGQIQ+M+ITSSGD+LD+ 
Sbjct: 1074 ALGFNIVSTSGTAKFLEEQGIPVERVLKLHEGRPHAGDLVANGQIQLMIITSSGDALDEK 1133

Query: 1125 DGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTVTMTALQDFFDVE 1174
            DG +LRR  LAYKVP++TT++G LAN +A++SLK   V M ALQDFF  +
Sbjct: 1134 DGRQLRRSALAYKVPIVTTIAGGLANLQAVKSLKECPVEMLALQDFFKAD 1183


>gi|168061790|ref|XP_001782869.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162665647|gb|EDQ52324.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 1084

 Score = 1797 bits (4654), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 849/1071 (79%), Positives = 957/1071 (89%)

Query: 101  GPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLADRTYITPMTPELVE 160
            GPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDP  ADRTYITPMTPELVE
Sbjct: 3    GPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPETADRTYITPMTPELVE 62

Query: 161  QVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDAIKKAEDRDLFKQA 220
            +VLEKERPDA+LPTMGGQTALNLA ALA+SG L+KY VELIGAKLDAI+KAEDR+LFK+A
Sbjct: 63   KVLEKERPDAILPTMGGQTALNLACALAKSGVLDKYNVELIGAKLDAIEKAEDRELFKKA 122

Query: 221  MKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGIAYNKEEFEAICKA 280
            M  IG+ +PPSGI +T+D+C  IA  IGEFPLIIRPAFTLGGTGGGIAYNKEEFE ICKA
Sbjct: 123  MAKIGINSPPSGIAHTMDQCFEIAERIGEFPLIIRPAFTLGGTGGGIAYNKEEFETICKA 182

Query: 281  GLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMGVHTGDSITVAPAQ 340
            GL+AS+ SQVLVEKSLLGWKEYELEVMRDLADNVVIICSIEN+D MGVHTGDSITVAPAQ
Sbjct: 183  GLSASINSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENIDSMGVHTGDSITVAPAQ 242

Query: 341  TLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMNPRVSRSSALASKA 400
            TLTDKEYQRLRD S+AIIREIGVECGGSNVQFAVNP +GEVM+IEMNPRVSRSSALASKA
Sbjct: 243  TLTDKEYQRLRDQSVAIIREIGVECGGSNVQFAVNPKNGEVMIIEMNPRVSRSSALASKA 302

Query: 401  TGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRFAFEKFPGSEPLLT 460
            TGFPIAKMAAKLSVG++LDQIPNDIT+KTPASFEPSIDYVVTKIPRFAFEKFPGS+P+LT
Sbjct: 303  TGFPIAKMAAKLSVGFTLDQIPNDITRKTPASFEPSIDYVVTKIPRFAFEKFPGSQPILT 362

Query: 461  TQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDWEQLKYSLRVPNPDR 520
            TQMKSVGEAMA+GRTFQESFQKA+RSLE G SGWGC  VKEL+WDW+++KY+LRVPNP+R
Sbjct: 363  TQMKSVGEAMAMGRTFQESFQKAMRSLETGHSGWGCEKVKELEWDWDKIKYNLRVPNPER 422

Query: 521  MQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSVSNMTKDDFYEVKRR 580
            M ++YAAMK+GM  DEI +L+ ID WF++Q  EL++ E FL +  +S+++KDD YEVKRR
Sbjct: 423  MYSLYAAMKRGMTQDEICDLTLIDPWFISQLGELLETENFLESVKLSDLSKDDLYEVKRR 482

Query: 581  GFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTPYMYSSYDFECESAP 640
            GFSDKQIA+ATKSTE EVR  RL  GV P+YKRVDTCAAEFEANTPY+YSSYD ECESAP
Sbjct: 483  GFSDKQIAYATKSTELEVRAYRLQHGVKPAYKRVDTCAAEFEANTPYLYSSYDAECESAP 542

Query: 641  TQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSNPETVSTDYDTSDRL 700
            T +KKVLILGGGPNRIGQGIEFDYCCCH +FSL  AGYETIMMNSNPETVSTDYDTSDRL
Sbjct: 543  TTRKKVLILGGGPNRIGQGIEFDYCCCHAAFSLGDAGYETIMMNSNPETVSTDYDTSDRL 602

Query: 701  YFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHRLPSASGDGLVRIWG 760
            YFEPLT EDV NVIDLERP+GIIVQFGGQTPLKL++PI +YL++ +  +ASG+G V+IWG
Sbjct: 603  YFEPLTAEDVCNVIDLERPDGIIVQFGGQTPLKLAVPIQEYLEKFQPDAASGEGKVKIWG 662

Query: 761  TSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEIGYPVVVRPSYVLGGR 820
            T+PDSIDAAEDR+RF+AI+ EL I+ P GGIAKSE DALAIAK +GYPVVVRPSYVLGGR
Sbjct: 663  TTPDSIDAAEDRKRFDAILNELEIKSPSGGIAKSEDDALAIAKRVGYPVVVRPSYVLGGR 722

Query: 821  AMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALADSCGNVVIGGIMEHI 880
            AMEIVY DE L TYLE AVEVDPERPVL+DKYL DA EIDVD+L D+ G+VVIGGIMEHI
Sbjct: 723  AMEIVYNDEKLKTYLETAVEVDPERPVLVDKYLIDATEIDVDSLTDAEGHVVIGGIMEHI 782

Query: 881  EQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNCQYAITTSGDVYLLE 940
            EQAGVHSGDSAC +P++ + S  L+ I  +T KLA+RL V GLMNCQYAIT  G+VY++E
Sbjct: 783  EQAGVHSGDSACTLPSQNLGSEALEKIRDYTTKLARRLGVVGLMNCQYAITLEGEVYIIE 842

Query: 941  ANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPKHVSVKEAVLPFEKFQ 1000
            ANPRASRTVPFVSKAIGHPLAKYAALVMSGKSL DL FT+EVIP+HVSVKEAVLPF+KFQ
Sbjct: 843  ANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLADLNFTEEVIPRHVSVKEAVLPFDKFQ 902

Query: 1001 GCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVFLSLNDLTKPHLERIA 1060
            GCDVLLGPEMRSTGEVMGID +F  AFAKAQIAA Q+LPL+GTVF+S+ND+ K  +  IA
Sbjct: 903  GCDVLLGPEMRSTGEVMGIDFNFDKAFAKAQIAANQRLPLTGTVFISMNDMLKEKVVPIA 962

Query: 1061 KAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVANGQIQMMVITSSGDS 1120
            K F D+GFKI+ T GTA++L   GI VERVLK+HEGRPHA D++ANG IQ+M+ITSSGD+
Sbjct: 963  KGFQDLGFKILCTDGTANYLGKAGIEVERVLKLHEGRPHAADLLANGDIQLMIITSSGDA 1022

Query: 1121 LDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTVTMTALQDFF 1171
            LDQIDG +LRR  L YKVP+ITT++GA+A  +A+  LK + V M ALQDFF
Sbjct: 1023 LDQIDGRQLRRLALGYKVPIITTIAGAVATLQAVTGLKGSPVEMMALQDFF 1073



 Score =  253 bits (647), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 150/403 (37%), Positives = 225/403 (55%), Gaps = 22/403 (5%)

Query: 90  TDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLADRT 149
           T  +K+LILG GP  IGQ  EFDY    A  +L + GYE I++NSNP T+ TD   +DR 
Sbjct: 543 TTRKKVLILGGGPNRIGQGIEFDYCCCHAAFSLGDAGYETIMMNSNPETVSTDYDTSDRL 602

Query: 150 YITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKY---------GVEL 200
           Y  P+T E V  V++ ERPD ++   GGQT L LAV + E   LEK+          V++
Sbjct: 603 YFEPLTAEDVCNVIDLERPDGIIVQFGGQTPLKLAVPIQEY--LEKFQPDAASGEGKVKI 660

Query: 201 IGAKLDAIKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTL 260
            G   D+I  AEDR  F   +  + +K+P  GI  + D+ ++IA  +G +P+++RP++ L
Sbjct: 661 WGTTPDSIDAAEDRKRFDAILNELEIKSPSGGIAKSEDDALAIAKRVG-YPVVVRPSYVL 719

Query: 261 GGTGGGIAYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSI 320
           GG    I YN E+ +   +  +       VLV+K L+   E +++ + D   +VVI   +
Sbjct: 720 GGRAMEIVYNDEKLKTYLETAVEVDPERPVLVDKYLIDATEIDVDSLTDAEGHVVIGGIM 779

Query: 321 ENVDPMGVHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGE 380
           E+++  GVH+GDS    P+Q L  +  +++RDY+  + R +GV  G  N Q+A+  ++GE
Sbjct: 780 EHIEQAGVHSGDSACTLPSQNLGSEALEKIRDYTTKLARRLGV-VGLMNCQYAIT-LEGE 837

Query: 381 VMVIEMNPRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYV 440
           V +IE NPR SR+    SKA G P+AK AA +  G SL  + N   +  P        +V
Sbjct: 838 VYIIEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLADL-NFTEEVIPR-------HV 889

Query: 441 VTKIPRFAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKA 483
             K     F+KF G + LL  +M+S GE M +   F ++F KA
Sbjct: 890 SVKEAVLPFDKFQGCDVLLGPEMRSTGEVMGIDFNFDKAFAKA 932


>gi|449482741|ref|XP_004156390.1| PREDICTED: carbamoyl-phosphate synthase large chain-like [Cucumis
            sativus]
          Length = 1040

 Score = 1788 bits (4632), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 866/1024 (84%), Positives = 931/1024 (90%), Gaps = 5/1024 (0%)

Query: 1    MSYCLNHCKNLSPSSFLAQKPS---FPLTRHID--FRSFLYSNKKTGSLSLRSWPPQLTR 55
            M YCL   ++L+  SFL+   S   FP +   +    +F     + GS SL   P     
Sbjct: 1    MGYCLIPSQSLTAKSFLSPSSSISRFPASSFSNPTLANFFSYTTRLGSSSLNIHPCHHRL 60

Query: 56   YSRSRVRASSAKIDSSAELSNGAASSKDQKLGKRTDLRKILILGAGPIVIGQACEFDYSG 115
                ++      +       N     K  K+GKRTDL+KI+ILGAGPIVIGQACEFDYSG
Sbjct: 61   SPFGKLYTQKGLVRCLKNDENPIKEVKAGKIGKRTDLKKIMILGAGPIVIGQACEFDYSG 120

Query: 116  TQACKALKEEGYEVILINSNPATIMTDPGLADRTYITPMTPELVEQVLEKERPDALLPTM 175
            TQACKALKEEGYEV+LINSNPATIMTDP LADRTY+TPMTPELVE+VLEKERPDALLPTM
Sbjct: 121  TQACKALKEEGYEVVLINSNPATIMTDPELADRTYVTPMTPELVEKVLEKERPDALLPTM 180

Query: 176  GGQTALNLAVALAESGALEKYGVELIGAKLDAIKKAEDRDLFKQAMKTIGVKTPPSGIGN 235
            GGQTALNLAVALAESGALEKYG+ELIGAKLDAIKKAEDR+LFKQAMK IG+KTPPSGIG 
Sbjct: 181  GGQTALNLAVALAESGALEKYGIELIGAKLDAIKKAEDRELFKQAMKNIGIKTPPSGIGT 240

Query: 236  TLDECISIANEIGEFPLIIRPAFTLGGTGGGIAYNKEEFEAICKAGLAASLTSQVLVEKS 295
            TL+ECI IA EIGEFPLIIRPAFTLGGTGGGIAYNKEEFE+ICKAGLAASLTSQVLVEKS
Sbjct: 241  TLEECIEIAGEIGEFPLIIRPAFTLGGTGGGIAYNKEEFESICKAGLAASLTSQVLVEKS 300

Query: 296  LLGWKEYELEVMRDLADNVVIICSIENVDPMGVHTGDSITVAPAQTLTDKEYQRLRDYSI 355
            LLGWKEYELEVMRDLADNVVIICSIEN+DPMGVHTGDSITVAPAQTLTDKEYQRLRDYSI
Sbjct: 301  LLGWKEYELEVMRDLADNVVIICSIENIDPMGVHTGDSITVAPAQTLTDKEYQRLRDYSI 360

Query: 356  AIIREIGVECGGSNVQFAVNPVDGEVMVIEMNPRVSRSSALASKATGFPIAKMAAKLSVG 415
            AIIREIGVECGGSNVQFAVNP DGEVMVIEMNPRVSRSSALASKATGFPIAKMAAKLS+G
Sbjct: 361  AIIREIGVECGGSNVQFAVNPADGEVMVIEMNPRVSRSSALASKATGFPIAKMAAKLSIG 420

Query: 416  YSLDQIPNDITKKTPASFEPSIDYVVTKIPRFAFEKFPGSEPLLTTQMKSVGEAMALGRT 475
            YSLDQIPNDITKKTPASFEPSIDYVVTKIPRFAFEKFPGS+P+LTTQMKSVGEAMALGRT
Sbjct: 421  YSLDQIPNDITKKTPASFEPSIDYVVTKIPRFAFEKFPGSQPILTTQMKSVGEAMALGRT 480

Query: 476  FQESFQKALRSLECGFSGWGCSNVKELDWDWEQLKYSLRVPNPDRMQAIYAAMKKGMKVD 535
            FQESFQKA+RSLECG+SGWGC  +K+LDWDWEQLKYSLRVPNPDR+ A+YAAMKKGMK+D
Sbjct: 481  FQESFQKAVRSLECGYSGWGCEPIKQLDWDWEQLKYSLRVPNPDRIHAVYAAMKKGMKLD 540

Query: 536  EIHELSFIDKWFLTQFKELIDVEQFLLTQSVSNMTKDDFYEVKRRGFSDKQIAFATKSTE 595
            +IHELS+IDKWFLTQ KEL+DVEQ+LL Q +SN+TK+DFYEVK+RGFSDKQIAFATKSTE
Sbjct: 541  DIHELSYIDKWFLTQLKELVDVEQYLLAQHLSNLTKEDFYEVKKRGFSDKQIAFATKSTE 600

Query: 596  KEVREKRLSLGVIPSYKRVDTCAAEFEANTPYMYSSYDFECESAPTQKKKVLILGGGPNR 655
             EVR KR+SLGV P+YKRVDTCAAEFEANTPYMYSSYDFECESAPTQKKKVLILGGGPNR
Sbjct: 601  NEVRSKRISLGVFPAYKRVDTCAAEFEANTPYMYSSYDFECESAPTQKKKVLILGGGPNR 660

Query: 656  IGQGIEFDYCCCHTSFSLQSAGYETIMMNSNPETVSTDYDTSDRLYFEPLTVEDVLNVID 715
            IGQGIEFDYCCCHTSF+LQ AGYETIMMNSNPETVSTDYDTSDRLYFEPLT+EDV NVID
Sbjct: 661  IGQGIEFDYCCCHTSFALQDAGYETIMMNSNPETVSTDYDTSDRLYFEPLTIEDVFNVID 720

Query: 716  LERPEGIIVQFGGQTPLKLSLPIHQYLDEHRLPSASGDGLVRIWGTSPDSIDAAEDRERF 775
            LERP+GIIVQFGGQTPLKL+LPI +YLDE +L SASGDG VRIWGTSPDSIDAAEDRERF
Sbjct: 721  LERPDGIIVQFGGQTPLKLALPIQRYLDETKLISASGDGHVRIWGTSPDSIDAAEDRERF 780

Query: 776  NAIIKELSIEQPKGGIAKSEADALAIAKEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYL 835
            NAI+ EL IEQP+GGIAKSEADAL+IAK+IGYPVVVRPSYVLGGRAMEIVY+D+ LVTYL
Sbjct: 781  NAILNELKIEQPRGGIAKSEADALSIAKDIGYPVVVRPSYVLGGRAMEIVYSDDKLVTYL 840

Query: 836  ENAVEVDPERPVLIDKYLSDAIEIDVDALADSCGNVVIGGIMEHIEQAGVHSGDSACMIP 895
            ENAVEVDPERPVL+DKYLSDAIEIDVDALADS GNV IGGIMEHIE AGVHSGDSAC +P
Sbjct: 841  ENAVEVDPERPVLVDKYLSDAIEIDVDALADSHGNVTIGGIMEHIELAGVHSGDSACSLP 900

Query: 896  TKTISSSCLDTISSWTIKLAKRLNVCGLMNCQYAITTSGDVYLLEANPRASRTVPFVSKA 955
            TKTI SSCL+TI +WT KLAKRLNVCGLMNCQYAIT +G+V+LLEANPRASRTVPFVSKA
Sbjct: 901  TKTIPSSCLETIRNWTTKLAKRLNVCGLMNCQYAITMAGEVFLLEANPRASRTVPFVSKA 960

Query: 956  IGHPLAKYAALVMSGKSLNDLGFTKEVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGE 1015
            IGHPLAKYA+LVMSGKSL +LGFTKEVIPKHVSVKEAVLPFEKFQG DVLLGPEMRSTGE
Sbjct: 961  IGHPLAKYASLVMSGKSLYELGFTKEVIPKHVSVKEAVLPFEKFQGSDVLLGPEMRSTGE 1020

Query: 1016 VMGI 1019
            VMG+
Sbjct: 1021 VMGL 1024



 Score =  225 bits (574), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 138/403 (34%), Positives = 218/403 (54%), Gaps = 22/403 (5%)

Query: 641  TQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSNPETVSTDYDTSDRL 700
            T  KK++ILG GP  IGQ  EFDY       +L+  GYE +++NSNP T+ TD + +DR 
Sbjct: 95   TDLKKIMILGAGPIVIGQACEFDYSGTQACKALKEEGYEVVLINSNPATIMTDPELADRT 154

Query: 701  YFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQ--YLDEHRLPSASGDGLVRI 758
            Y  P+T E V  V++ ERP+ ++   GGQT L L++ + +   L+++          + +
Sbjct: 155  YVTPMTPELVEKVLEKERPDALLPTMGGQTALNLAVALAESGALEKYG---------IEL 205

Query: 759  WGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEIG-YPVVVRPSYVL 817
             G   D+I  AEDRE F   +K + I+ P  GI  +  + + IA EIG +P+++RP++ L
Sbjct: 206  IGAKLDAIKKAEDRELFKQAMKNIGIKTPPSGIGTTLEECIEIAGEIGEFPLIIRPAFTL 265

Query: 818  GGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALADSCGNVVIGGIM 877
            GG    I Y  E   +  +  +       VL++K L    E +++ + D   NVVI   +
Sbjct: 266  GGTGGGIAYNKEEFESICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSI 325

Query: 878  EHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNV-CGLMNCQYAITTS-GD 935
            E+I+  GVH+GDS  + P +T++      +  ++I + + + V CG  N Q+A+  + G+
Sbjct: 326  ENIDPMGVHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPADGE 385

Query: 936  VYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDL--GFTKEVIPK------HV 987
            V ++E NPR SR+    SKA G P+AK AA +  G SL+ +    TK+          +V
Sbjct: 386  VMVIEMNPRVSRSSALASKATGFPIAKMAAKLSIGYSLDQIPNDITKKTPASFEPSIDYV 445

Query: 988  SVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKA 1030
              K     FEKF G   +L  +M+S GE M +  +F  +F KA
Sbjct: 446  VTKIPRFAFEKFPGSQPILTTQMKSVGEAMALGRTFQESFQKA 488


>gi|297746205|emb|CBI16261.3| unnamed protein product [Vitis vinifera]
          Length = 1016

 Score = 1784 bits (4621), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 869/1049 (82%), Positives = 939/1049 (89%), Gaps = 57/1049 (5%)

Query: 96   LILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLADRTYITPMT 155
            +ILGAGPIVIGQACEFDYSGTQACKALKEEGYEV+LINSNPATIMTDP +AD+TYITPMT
Sbjct: 1    MILGAGPIVIGQACEFDYSGTQACKALKEEGYEVVLINSNPATIMTDPDMADKTYITPMT 60

Query: 156  PELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDAIKKAEDRD 215
            PELVEQVLEKERPDA+LPTMGGQTALNLAVALAESG LEKYGVELIGAKL+AIKKAEDR+
Sbjct: 61   PELVEQVLEKERPDAILPTMGGQTALNLAVALAESGVLEKYGVELIGAKLEAIKKAEDRE 120

Query: 216  LFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGIAYNKEEFE 275
            LFKQAM+ IGVKTPPSGIG TLDEC+ IAN IGEFPLIIRPAFTLGGTGGGIAYN+EEFE
Sbjct: 121  LFKQAMENIGVKTPPSGIGTTLDECMEIANSIGEFPLIIRPAFTLGGTGGGIAYNREEFE 180

Query: 276  AICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMGVHTGDSIT 335
            AICK+GLAASLTS                                               
Sbjct: 181  AICKSGLAASLTS----------------------------------------------- 193

Query: 336  VAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMNPRVSRSSA 395
                Q L +K     ++Y + ++R++       NV FAVNPVDGEVMVIEMNPRVSRSSA
Sbjct: 194  ----QVLVEKSLLGWKEYELEVMRDLA-----DNV-FAVNPVDGEVMVIEMNPRVSRSSA 243

Query: 396  LASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRFAFEKFPGS 455
            LASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRFAFEKFPGS
Sbjct: 244  LASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRFAFEKFPGS 303

Query: 456  EPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDWEQLKYSLRV 515
            +P+LTTQMKSVGE+MALGRTFQESFQKA+RSLECG+SGWGC+ +KE+DWDWEQLKYSLRV
Sbjct: 304  QPILTTQMKSVGESMALGRTFQESFQKAVRSLECGYSGWGCAQLKEMDWDWEQLKYSLRV 363

Query: 516  PNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSVSNMTKDDFY 575
            PNPDR+ AIYAAMKKGMKVD+IHELSFIDKWFLTQ KEL+DVEQFLL++S+S+++KDDFY
Sbjct: 364  PNPDRIHAIYAAMKKGMKVDDIHELSFIDKWFLTQLKELVDVEQFLLSRSLSDLSKDDFY 423

Query: 576  EVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTPYMYSSYDFE 635
            EVKRRGFSDKQIAFA+KSTEKEVR KRLSLGV P+YKRVDTCAAEFEANTPYMYSSYDFE
Sbjct: 424  EVKRRGFSDKQIAFASKSTEKEVRLKRLSLGVTPAYKRVDTCAAEFEANTPYMYSSYDFE 483

Query: 636  CESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSNPETVSTDYD 695
            CESAPTQ+KKVLILGGGPNRIGQGIEFDYCCCHTSF+LQ AGYETIMMNSNPETVSTDYD
Sbjct: 484  CESAPTQRKKVLILGGGPNRIGQGIEFDYCCCHTSFALQKAGYETIMMNSNPETVSTDYD 543

Query: 696  TSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHRLPSASGDGL 755
            TSDRLYFEPLTVEDVLN+IDLE+P+GIIVQFGGQTPLKL+LPI  YLDEHR  SASG G 
Sbjct: 544  TSDRLYFEPLTVEDVLNIIDLEQPDGIIVQFGGQTPLKLALPIQNYLDEHRPLSASGVGH 603

Query: 756  VRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEIGYPVVVRPSY 815
            VRIWGTSPDSIDAAE+RERFNAI+ +L IEQPKGGIAKSEADALAIA +IGYPVVVRPSY
Sbjct: 604  VRIWGTSPDSIDAAENRERFNAILNDLKIEQPKGGIAKSEADALAIAMDIGYPVVVRPSY 663

Query: 816  VLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALADSCGNVVIGG 875
            VLGGRAMEIVY+D+ LVTYLENAVEVDPERPVLID+YLSDAIEIDVDALADS GNVVIGG
Sbjct: 664  VLGGRAMEIVYSDDKLVTYLENAVEVDPERPVLIDRYLSDAIEIDVDALADSEGNVVIGG 723

Query: 876  IMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNCQYAITTSGD 935
            IMEHIEQAGVHSGDSAC +PTKTI SSCLDTI SWT  LAK+LNVCGLMNCQYAIT SG 
Sbjct: 724  IMEHIEQAGVHSGDSACSLPTKTIPSSCLDTIRSWTTILAKKLNVCGLMNCQYAITASGS 783

Query: 936  VYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPKHVSVKEAVLP 995
            V+LLEANPRASRTVPFVSKAIGHPLAKYA+LVMSGKSL+DL FTKEVIP+HVSVKEAVLP
Sbjct: 784  VFLLEANPRASRTVPFVSKAIGHPLAKYASLVMSGKSLHDLCFTKEVIPRHVSVKEAVLP 843

Query: 996  FEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVFLSLNDLTKPH 1055
            FEKFQGCDVLLGPEMRSTGEVMGID  FP+AFAKAQIAAGQKLP+SGTVFLSLNDLTKPH
Sbjct: 844  FEKFQGCDVLLGPEMRSTGEVMGIDFEFPVAFAKAQIAAGQKLPVSGTVFLSLNDLTKPH 903

Query: 1056 LERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVANGQIQMMVIT 1115
            L  IA++F+ +GF+IVSTSGTAH LEL+GI VERVLKMHEGRPHAGDM+ANGQIQ+MVIT
Sbjct: 904  LATIARSFIGLGFRIVSTSGTAHVLELEGIPVERVLKMHEGRPHAGDMIANGQIQLMVIT 963

Query: 1116 SSGDSLDQIDGLKLRRRGLAYKVPVITTV 1144
            SSGD+ DQIDG +LRR  LAYKVP+ITTV
Sbjct: 964  SSGDTHDQIDGRQLRRMALAYKVPIITTV 992



 Score =  218 bits (556), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 136/401 (33%), Positives = 213/401 (53%), Gaps = 18/401 (4%)

Query: 90  TDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLADRT 149
           T  +K+LILG GP  IGQ  EFDY       AL++ GYE I++NSNP T+ TD   +DR 
Sbjct: 489 TQRKKVLILGGGPNRIGQGIEFDYCCCHTSFALQKAGYETIMMNSNPETVSTDYDTSDRL 548

Query: 150 YITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVA----LAESGALEKYG---VELIG 202
           Y  P+T E V  +++ E+PD ++   GGQT L LA+     L E   L   G   V + G
Sbjct: 549 YFEPLTVEDVLNIIDLEQPDGIIVQFGGQTPLKLALPIQNYLDEHRPLSASGVGHVRIWG 608

Query: 203 AKLDAIKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGG 262
              D+I  AE+R+ F   +  + ++ P  GI  +  + ++IA +IG +P+++RP++ LGG
Sbjct: 609 TSPDSIDAAENRERFNAILNDLKIEQPKGGIAKSEADALAIAMDIG-YPVVVRPSYVLGG 667

Query: 263 TGGGIAYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIEN 322
               I Y+ ++     +  +       VL+++ L    E +++ + D   NVVI   +E+
Sbjct: 668 RAMEIVYSDDKLVTYLENAVEVDPERPVLIDRYLSDAIEIDVDALADSEGNVVIGGIMEH 727

Query: 323 VDPMGVHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVM 382
           ++  GVH+GDS    P +T+       +R ++  + +++ V CG  N Q+A+    G V 
Sbjct: 728 IEQAGVHSGDSACSLPTKTIPSSCLDTIRSWTTILAKKLNV-CGLMNCQYAIT-ASGSVF 785

Query: 383 VIEMNPRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVT 442
           ++E NPR SR+    SKA G P+AK A+ +  G SL  +    TK+          +V  
Sbjct: 786 LLEANPRASRTVPFVSKAIGHPLAKYASLVMSGKSLHDLC--FTKEVIPR------HVSV 837

Query: 443 KIPRFAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKA 483
           K     FEKF G + LL  +M+S GE M +   F  +F KA
Sbjct: 838 KEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDFEFPVAFAKA 878


>gi|354566207|ref|ZP_08985380.1| carbamoyl-phosphate synthase, large subunit [Fischerella sp. JSC-11]
 gi|353546715|gb|EHC16163.1| carbamoyl-phosphate synthase, large subunit [Fischerella sp. JSC-11]
          Length = 1099

 Score = 1558 bits (4033), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 746/1101 (67%), Positives = 903/1101 (82%), Gaps = 26/1101 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            +R D++KIL+LG+GPIVIGQACEFDYSGTQACKAL+EEGYEV+L+NSNPATIMTDP  AD
Sbjct: 3    RRDDIKKILLLGSGPIVIGQACEFDYSGTQACKALREEGYEVVLVNSNPATIMTDPETAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
            RTYI P+TPELVE+V+ KERPDALLPTMGGQTALN+AV LA++G L++Y VELIGAKL A
Sbjct: 63   RTYIEPLTPELVEKVIAKERPDALLPTMGGQTALNIAVTLAKNGVLQQYNVELIGAKLPA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I+KAEDR LF  AM  IGVK  PSG  ++L+E  +IA  IG +PLIIRPAFTLGGTGGGI
Sbjct: 123  IEKAEDRQLFNDAMAKIGVKVCPSGTASSLEEAKAIARSIGTYPLIIRPAFTLGGTGGGI 182

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEF  + + G+ AS  SQ+L+++SLLGWKEYELEVMRDLADNVVIICSIEN+DPMG
Sbjct: 183  AYNEEEFAEMAQTGIDASPVSQILIDQSLLGWKEYELEVMRDLADNVVIICSIENLDPMG 242

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            +HTGDSITVAPAQTLTDKEYQRLRD +I IIREIGVE GGSN+QFAVNPVDGEV+VIEMN
Sbjct: 243  IHTGDSITVAPAQTLTDKEYQRLRDMAIKIIREIGVETGGSNIQFAVNPVDGEVVVIEMN 302

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRF 447
            PRVSRSSALASKATGFPIAKMAAKL+VGY+LD+I NDITKKTPASFEP+IDYVVTKIPRF
Sbjct: 303  PRVSRSSALASKATGFPIAKMAAKLAVGYTLDEIKNDITKKTPASFEPTIDYVVTKIPRF 362

Query: 448  AFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDWE 507
            AFEKFPGSEP+LTTQMKSVGEAMA+GRTF ESFQKALRSLE G +GWGC ++KE     E
Sbjct: 363  AFEKFPGSEPVLTTQMKSVGEAMAMGRTFNESFQKALRSLETGRAGWGC-DIKEKLPSGE 421

Query: 508  QLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSVS 567
            Q++  LR PNP+R+ A+  AM+ G+ ++EI+EL+ ID WFL + +EL+++E+FL   S+ 
Sbjct: 422  QIRAQLRTPNPERIFAVRHAMQLGLSIEEIYELTGIDPWFLEKMQELLEIEKFLKRTSLQ 481

Query: 568  NMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTPY 627
             +TK+  YEVKR+GFSD+QIA+ATK+TE EVR  R  LGVIP YK VDTCAAEFEA TPY
Sbjct: 482  QLTKEQMYEVKRQGFSDRQIAYATKTTEDEVRAYRKQLGVIPVYKTVDTCAAEFEAFTPY 541

Query: 628  MYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSNP 687
             YS+Y+ E E  PT K KV+ILGGGPNRIGQGIEFDYCCCH +F+L++AGYETIM+NSNP
Sbjct: 542  YYSTYEQETEILPTDKPKVMILGGGPNRIGQGIEFDYCCCHAAFALKNAGYETIMVNSNP 601

Query: 688  ETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDE--- 744
            ETVSTDYDTSDRLYFEPLT EDVLN+I+ E P GIIVQFGGQTPLKL++P+ +YL++   
Sbjct: 602  ETVSTDYDTSDRLYFEPLTKEDVLNIIEAENPIGIIVQFGGQTPLKLAVPLQKYLNQLGN 661

Query: 745  -----------HRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAK 793
                       ++LP      + +IWGTSPDSID AEDRERF  I+K+L+I QP  GIA+
Sbjct: 662  GSSVIGNREEPNQLP------ITKIWGTSPDSIDIAEDRERFEKILKQLNIAQPANGIAR 715

Query: 794  SEADALAIAKEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYL 853
            +  DAL +AK IGYPVVVRPSYVLGGRAMEIVY+D  L  Y+  AV+V+PE P+LIDK+L
Sbjct: 716  TYEDALIVAKRIGYPVVVRPSYVLGGRAMEIVYSDTELERYMTFAVQVEPEHPILIDKFL 775

Query: 854  SDAIEIDVDALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIK 913
             +AIE+DVDA+AD  G VVIGGIMEHIEQAG+HSGDSAC +P  ++S++ L+ I  WT++
Sbjct: 776  ENAIEVDVDAIADHTGRVVIGGIMEHIEQAGIHSGDSACSLPAISLSAAVLNQIRQWTVQ 835

Query: 914  LAKRLNVCGLMNCQYAI----TTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMS 969
            LA+ LNV GLMN Q+A+    T S  VY+LEANPRASRTVPFVSKA G PLAK A+L+MS
Sbjct: 836  LAQALNVVGLMNIQFAVAGSQTESPQVYILEANPRASRTVPFVSKATGVPLAKLASLIMS 895

Query: 970  GKSLNDLGFTKEVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAK 1029
            GK+L +LGFTKEVIP H++VKEAVLPF KF G D +LGPEMRSTGEVMGID  F  AFAK
Sbjct: 896  GKTLEELGFTKEVIPSHIAVKEAVLPFNKFPGTDTILGPEMRSTGEVMGIDSDFGRAFAK 955

Query: 1030 AQIAAGQKLPLSGTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVER 1089
            A++ AG++LPLSGTVF+S+ND  K     + K F+D+GF +++T GT   L+  G+ VE 
Sbjct: 956  AELGAGERLPLSGTVFVSMNDRDKAAAVAVVKEFIDLGFAVMATDGTRRVLQEHGLEVEL 1015

Query: 1090 VLKMHEGRPHAGDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALA 1149
            VLK+HEGRPH  D + N +IQ+++ T SG+   Q D   +RR  LAYK+P+ITT++GA A
Sbjct: 1016 VLKLHEGRPHVLDAIKNHKIQLIINTPSGEEA-QSDARLIRRTALAYKIPIITTIAGAKA 1074

Query: 1150 NAEAIRSLKSNTVTMTALQDF 1170
               AIR+L++ T+ +  +Q++
Sbjct: 1075 TVAAIRTLQNTTLDVKVIQEY 1095


>gi|255075411|ref|XP_002501380.1| carbamoyl-phosphate synthase [Micromonas sp. RCC299]
 gi|226516644|gb|ACO62638.1| carbamoyl-phosphate synthase [Micromonas sp. RCC299]
          Length = 1078

 Score = 1555 bits (4026), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 752/1078 (69%), Positives = 883/1078 (81%), Gaps = 2/1078 (0%)

Query: 96   LILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLADRTYITPMT 155
            +I+GAGPIVIGQACEFDYSGTQACK+L+ EGY+V+L+NSNPATIMTDP  A+RTY+ PMT
Sbjct: 1    MIIGAGPIVIGQACEFDYSGTQACKSLRAEGYDVVLLNSNPATIMTDPETANRTYVGPMT 60

Query: 156  PELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDAIKKAEDRD 215
            PELVEQ+L KE+PDALLPTMGGQTALNL   LAE+G LEK+GVELIGAKLDAI KAEDR 
Sbjct: 61   PELVEQILIKEKPDALLPTMGGQTALNLTKTLAENGILEKHGVELIGAKLDAINKAEDRQ 120

Query: 216  LFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGIAYNKEEFE 275
            LFK+AM+ IG+KTPPSG  N  DE + IA+ IG FPLIIRPAFTLGG+GGGIAYN EEF+
Sbjct: 121  LFKEAMEKIGLKTPPSGTANNWDEAVEIADYIGSFPLIIRPAFTLGGSGGGIAYNMEEFK 180

Query: 276  AICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMGVHTGDSIT 335
             I  +GL AS T+QVL+EKSLLGWKEYELEVMRDLADNVVI+CSIEN+DPMGVHTGDSIT
Sbjct: 181  TIVTSGLNASTTTQVLIEKSLLGWKEYELEVMRDLADNVVIVCSIENLDPMGVHTGDSIT 240

Query: 336  VAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMNPRVSRSSA 395
            +APAQTLTDKEYQRLRD S+ IIREIGVECGGSNVQ AVNP DGE+M+IEMNPRVSRSSA
Sbjct: 241  IAPAQTLTDKEYQRLRDASVDIIREIGVECGGSNVQMAVNPADGELMIIEMNPRVSRSSA 300

Query: 396  LASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRFAFEKFPGS 455
            LASKATGFPIAKMAAKL+VG +LD IPNDIT KTPASFEPSIDYV+TKIPRFAFEKFPGS
Sbjct: 301  LASKATGFPIAKMAAKLAVGCTLDGIPNDITLKTPASFEPSIDYVITKIPRFAFEKFPGS 360

Query: 456  EPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCS-NVKELDWDWEQLKYSLR 514
             P+LTTQMKSVGEAMA+GRT+QESF KALRSLE G SGWG +    E+  D E +K +L 
Sbjct: 361  VPVLTTQMKSVGEAMAVGRTWQESFNKALRSLETGLSGWGLNPKDGEMQGDLETIKEALA 420

Query: 515  VPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSVSNMTK-DD 573
            VPNP R+ A++ A   GM  +EI +++  D WFL Q ++L   EQ+L + S  +     D
Sbjct: 421  VPNPSRVVAMHEAFMAGMSAEEIRKITAFDPWFLRQMEDLFQTEQWLKSLSSLSDLDKQD 480

Query: 574  FYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTPYMYSSYD 633
            + EVKRRGFSD QIA A K TE EVR+ R+SLGV PS KRVDTCAAEFEA+TPYMYSSYD
Sbjct: 481  WSEVKRRGFSDIQIARAFKVTEGEVRKARVSLGVTPSMKRVDTCAAEFEASTPYMYSSYD 540

Query: 634  FECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSNPETVSTD 693
               E   T KKK+LILGGGPNRIGQGIEFDYCCCH +F+L+ AGYETIM+NSNPETVSTD
Sbjct: 541  GNDEVDATDKKKILILGGGPNRIGQGIEFDYCCCHAAFALKDAGYETIMLNSNPETVSTD 600

Query: 694  YDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHRLPSASGD 753
            YDTSDRLYFEPLTVEDVLNV++ ERPEGIIVQFGGQTPL L+  + + L ++ +P+ASG+
Sbjct: 601  YDTSDRLYFEPLTVEDVLNVVEAERPEGIIVQFGGQTPLSLATRLEKALTDNPIPAASGN 660

Query: 754  GLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEIGYPVVVRP 813
            G  RI GT PDSIDAAEDRER+ AI+ EL I QP GG+A+SE++AL  A  IGYPV+VRP
Sbjct: 661  GNCRILGTPPDSIDAAEDRERWQAILTELDILQPPGGVARSESEALVAANNIGYPVMVRP 720

Query: 814  SYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALADSCGNVVI 873
            S+VLGGRAMEIV +D  L  Y+  AVEVDPE+PVL+DKYL++A E+DVDAL D+ GNVVI
Sbjct: 721  SFVLGGRAMEIVSSDADLKRYIRTAVEVDPEKPVLVDKYLNNATELDVDALCDAEGNVVI 780

Query: 874  GGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNCQYAITTS 933
             GIMEHIEQAGVHSGDSAC IPT+TI  S L TI  WT K+AKRL V GL+N QYA+   
Sbjct: 781  AGIMEHIEQAGVHSGDSACSIPTQTIPESSLATIRDWTPKVAKRLGVVGLINIQYAVIPD 840

Query: 934  GDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPKHVSVKEAV 993
            G VY++EANPRASRTVPFV+KAIGHP+AKYA+LVM+G +L DL FT+EV   HV+VKEAV
Sbjct: 841  GTVYIIEANPRASRTVPFVAKAIGHPIAKYASLVMAGATLQDLKFTEEVKLNHVAVKEAV 900

Query: 994  LPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVFLSLNDLTK 1053
            LPF+KF G D LLGPEMRSTGEVMGID  F +A+AKAQIAAGQ+LP SG VF+S+ D  K
Sbjct: 901  LPFDKFPGADTLLGPEMRSTGEVMGIDRDFTVAYAKAQIAAGQRLPTSGKVFISVRDSDK 960

Query: 1054 PHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVANGQIQMMV 1113
            P +  +AK F ++G  +V++ GTA  +E  G+ V+   K+HEGRPH GDM+ +G I +MV
Sbjct: 961  PAIVDVAKQFHELGMTVVASGGTAKTIEAAGVPVKVAPKIHEGRPHIGDMLLDGDISLMV 1020

Query: 1114 ITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTVTMTALQDFF 1171
            +TSSGD  D  DG ++RR  +  KVP++TT++GA A   A++ L+   +TM  LQDFF
Sbjct: 1021 VTSSGDEADMKDGRQIRRTAVGLKVPLVTTIAGAKATCSAVKVLQEGALTMQPLQDFF 1078



 Score =  251 bits (642), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 152/434 (35%), Positives = 233/434 (53%), Gaps = 20/434 (4%)

Query: 57  SRSRVRASSAKIDSSAELSNGAASSKDQKLGKRTDLRKILILGAGPIVIGQACEFDYSGT 116
           S  RV   +A+ ++S      +    D+     TD +KILILG GP  IGQ  EFDY   
Sbjct: 517 SMKRVDTCAAEFEASTPYMYSSYDGNDEV--DATDKKKILILGGGPNRIGQGIEFDYCCC 574

Query: 117 QACKALKEEGYEVILINSNPATIMTDPGLADRTYITPMTPELVEQVLEKERPDALLPTMG 176
            A  ALK+ GYE I++NSNP T+ TD   +DR Y  P+T E V  V+E ERP+ ++   G
Sbjct: 575 HAAFALKDAGYETIMLNSNPETVSTDYDTSDRLYFEPLTVEDVLNVVEAERPEGIIVQFG 634

Query: 177 GQTALNLAVALAES-------GALEKYGVELIGAKLDAIKKAEDRDLFKQAMKTIGVKTP 229
           GQT L+LA  L ++        A       ++G   D+I  AEDR+ ++  +  + +  P
Sbjct: 635 GQTPLSLATRLEKALTDNPIPAASGNGNCRILGTPPDSIDAAEDRERWQAILTELDILQP 694

Query: 230 PSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGIAYNKEEFEAICKAGLAASLTSQ 289
           P G+  +  E +  AN IG +P+++RP+F LGG    I  +  + +   +  +       
Sbjct: 695 PGGVARSESEALVAANNIG-YPVMVRPSFVLGGRAMEIVSSDADLKRYIRTAVEVDPEKP 753

Query: 290 VLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMGVHTGDSITVAPAQTLTDKEYQR 349
           VLV+K L    E +++ + D   NVVI   +E+++  GVH+GDS    P QT+ +     
Sbjct: 754 VLVDKYLNNATELDVDALCDAEGNVVIAGIMEHIEQAGVHSGDSACSIPTQTIPESSLAT 813

Query: 350 LRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMNPRVSRSSALASKATGFPIAKMA 409
           +RD++  + + +GV  G  N+Q+AV P DG V +IE NPR SR+    +KA G PIAK A
Sbjct: 814 IRDWTPKVAKRLGV-VGLINIQYAVIP-DGTVYIIEANPRASRTVPFVAKAIGHPIAKYA 871

Query: 410 AKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRFAFEKFPGSEPLLTTQMKSVGEA 469
           + +  G +L  +          + E  +++V  K     F+KFPG++ LL  +M+S GE 
Sbjct: 872 SLVMAGATLQDL--------KFTEEVKLNHVAVKEAVLPFDKFPGADTLLGPEMRSTGEV 923

Query: 470 MALGRTFQESFQKA 483
           M + R F  ++ KA
Sbjct: 924 MGIDRDFTVAYAKA 937


>gi|384247352|gb|EIE20839.1| carbamoyl-phosphate synthase [Coccomyxa subellipsoidea C-169]
          Length = 1087

 Score = 1555 bits (4025), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 757/1077 (70%), Positives = 894/1077 (83%), Gaps = 4/1077 (0%)

Query: 96   LILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLADRTYITPMT 155
            +ILGAGPIVIGQACEFDYSGTQACKALK EGY V+L+NSNPATIMTDPG ADRTYI PMT
Sbjct: 1    MILGAGPIVIGQACEFDYSGTQACKALKAEGYRVVLLNSNPATIMTDPGTADRTYIGPMT 60

Query: 156  PELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDAIKKAEDRD 215
            PELVEQ+LEKERP+A+LPTMGGQTALNLA AL+E G L+KY VELIGAKL +I KAEDR+
Sbjct: 61   PELVEQILEKERPEAILPTMGGQTALNLAKALSEQGILDKYNVELIGAKLPSIDKAEDRE 120

Query: 216  LFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGIAYNKEEFE 275
            LFKQAMK IG+KTPPSG  +T++E + IA++IG+FPLIIRPAFTLGGTGGGIAYN +EF 
Sbjct: 121  LFKQAMKKIGLKTPPSGTASTMEEALVIADQIGKFPLIIRPAFTLGGTGGGIAYNVDEFH 180

Query: 276  AICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMGVHTGDSIT 335
             I  AGL ASLT QVLVE SLLGWKEYELEVMRDLADNVVIICSIEN+DPMGVHTGDSIT
Sbjct: 181  EIVDAGLTASLTKQVLVEMSLLGWKEYELEVMRDLADNVVIICSIENIDPMGVHTGDSIT 240

Query: 336  VAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMNPRVSRSSA 395
            +APAQTLTDKEYQRLRD S+AIIRE+GVECGGSNVQ AVNPVDGEVM+IEMNPRVSRSSA
Sbjct: 241  IAPAQTLTDKEYQRLRDASVAIIREMGVECGGSNVQMAVNPVDGEVMIIEMNPRVSRSSA 300

Query: 396  LASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRFAFEKFPGS 455
            LASKATGFPIAK+AAKL+VG SLDQI NDIT+KTPASFEPSIDY+VTKIPRFAFEKFPG+
Sbjct: 301  LASKATGFPIAKIAAKLAVGLSLDQIANDITRKTPASFEPSIDYIVTKIPRFAFEKFPGA 360

Query: 456  EPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGC-SNVKELDWDWEQLKYSLR 514
            +  LTTQMKSVGEAMA+GRTFQESFQKALRSLE G  GW    N K +    +Q++Y LR
Sbjct: 361  KAELTTQMKSVGEAMAMGRTFQESFQKALRSLETGLDGWSLPKNWKRM--TRQQVEYGLR 418

Query: 515  VPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSVSNMTKDDF 574
            VPNPDRM  +  A + G   +++ EL+ ID WFL+QF+ L + E++L T+ +++++ +DF
Sbjct: 419  VPNPDRMLIVKQAFEDGFTKEQLFELTNIDPWFLSQFEGLHETEEWLRTRKLADLSAEDF 478

Query: 575  YEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTPYMYSSYDF 634
             + K+RGFSD QIA A  ++  EVR +R  LGV+PSYKRVDTCAAEFEA TPYMYSSYD 
Sbjct: 479  LQTKKRGFSDPQIARAVGASPSEVRSRRKELGVVPSYKRVDTCAAEFEAETPYMYSSYDG 538

Query: 635  ECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSNPETVSTDY 694
            + E+AP+  KKVLILGGGPNRIGQGIEFDYCCCH SFSL++AGYETIMMNSNPETVSTDY
Sbjct: 539  DSEAAPSSSKKVLILGGGPNRIGQGIEFDYCCCHASFSLRAAGYETIMMNSNPETVSTDY 598

Query: 695  DTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHRLPSASGDG 754
            DTS RLYFEPLTVEDVLNVI+ ERP+GIIVQFGGQTPLKL+ P+ + L  + +P+ASG+G
Sbjct: 599  DTSSRLYFEPLTVEDVLNVIETERPDGIIVQFGGQTPLKLAAPLQEALTNNPIPAASGEG 658

Query: 755  LVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEIGYPVVVRPS 814
             VRIWGTSP+SID AEDR+++  I+  L I+QP G +  SE  AL +A+++GYPV+VRPS
Sbjct: 659  NVRIWGTSPESIDEAEDRDKWYKILTRLDIKQPPGDMVVSEQQALTVAQKLGYPVMVRPS 718

Query: 815  YVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALADSCGNVVIG 874
            +VLGGRAMEIVYTD+ L  Y+ENAVEVDP+RPVL+DKYL  A E+DVDAL D  GNVVI 
Sbjct: 719  FVLGGRAMEIVYTDKDLKRYIENAVEVDPDRPVLVDKYLDRADELDVDALCDKDGNVVIC 778

Query: 875  GIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNCQYAITTSG 934
            GIM+HIEQAGVHSGDSAC IP +TI   CLDTI  WT KLAK L V GL+N QY I  + 
Sbjct: 779  GIMQHIEQAGVHSGDSACSIPPQTIPEECLDTIRDWTTKLAKALKVIGLINIQYCIQDN- 837

Query: 935  DVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPKHVSVKEAVL 994
            +VY++EANPRASRTVPFV+KAIGHPLA YA+L+MSG++L+++GFT+E +  HV+VKEAVL
Sbjct: 838  EVYIIEANPRASRTVPFVAKAIGHPLAAYASLLMSGQTLSEIGFTEEPVLNHVAVKEAVL 897

Query: 995  PFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVFLSLNDLTKP 1054
            PFEKFQG D LLGPEMRSTGEVMGID +F  A+AKA IAAGQKLP SG +F+++ D  K 
Sbjct: 898  PFEKFQGADTLLGPEMRSTGEVMGIDKTFAKAYAKAAIAAGQKLPASGNIFITMIDKHKQ 957

Query: 1055 HLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVANGQIQMMVI 1114
             +  IAK  +++G+ IV+T GTA  L   G+    VLK+ EGRP+AGD++ NG I MM I
Sbjct: 958  DVIPIAKKLVELGYGIVATRGTAAALREGGVEATEVLKIQEGRPNAGDLMKNGDISMMFI 1017

Query: 1115 TSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTVTMTALQDFF 1171
            TS+G+  D  DG  LRR  LA KVP+ITT++GA A  +A+  +KS  +    +QD+F
Sbjct: 1018 TSTGNEEDVRDGKNLRRLALALKVPIITTLAGARATVQALEGMKSGPLEQVPIQDYF 1074



 Score =  230 bits (586), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 135/391 (34%), Positives = 216/391 (55%), Gaps = 19/391 (4%)

Query: 93  RKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLADRTYIT 152
           +K+LILG GP  IGQ  EFDY    A  +L+  GYE I++NSNP T+ TD   + R Y  
Sbjct: 548 KKVLILGGGPNRIGQGIEFDYCCCHASFSLRAAGYETIMMNSNPETVSTDYDTSSRLYFE 607

Query: 153 PMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAES-------GALEKYGVELIGAKL 205
           P+T E V  V+E ERPD ++   GGQT L LA  L E+        A  +  V + G   
Sbjct: 608 PLTVEDVLNVIETERPDGIIVQFGGQTPLKLAAPLQEALTNNPIPAASGEGNVRIWGTSP 667

Query: 206 DAIKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGG 265
           ++I +AEDRD + + +  + +K PP  +  +  + +++A ++G +P+++RP+F LGG   
Sbjct: 668 ESIDEAEDRDKWYKILTRLDIKQPPGDMVVSEQQALTVAQKLG-YPVMVRPSFVLGGRAM 726

Query: 266 GIAYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDP 325
            I Y  ++ +   +  +       VLV+K L    E +++ + D   NVVI   +++++ 
Sbjct: 727 EIVYTDKDLKRYIENAVEVDPDRPVLVDKYLDRADELDVDALCDKDGNVVICGIMQHIEQ 786

Query: 326 MGVHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIE 385
            GVH+GDS    P QT+ ++    +RD++  + + + V  G  N+Q+ +   D EV +IE
Sbjct: 787 AGVHSGDSACSIPPQTIPEECLDTIRDWTTKLAKALKV-IGLINIQYCIQ--DNEVYIIE 843

Query: 386 MNPRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIP 445
            NPR SR+    +KA G P+A  A+ L  G +L +I          + EP +++V  K  
Sbjct: 844 ANPRASRTVPFVAKAIGHPLAAYASLLMSGQTLSEI--------GFTEEPVLNHVAVKEA 895

Query: 446 RFAFEKFPGSEPLLTTQMKSVGEAMALGRTF 476
              FEKF G++ LL  +M+S GE M + +TF
Sbjct: 896 VLPFEKFQGADTLLGPEMRSTGEVMGIDKTF 926


>gi|411120412|ref|ZP_11392784.1| carbamoyl-phosphate synthase large subunit [Oscillatoriales
            cyanobacterium JSC-12]
 gi|410709081|gb|EKQ66596.1| carbamoyl-phosphate synthase large subunit [Oscillatoriales
            cyanobacterium JSC-12]
          Length = 1080

 Score = 1546 bits (4004), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 739/1085 (68%), Positives = 896/1085 (82%), Gaps = 10/1085 (0%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            +R DL+KIL++G+GPIVIGQACEFDYSGTQACKAL++EGYEVIL+NSNPATIMTDP  AD
Sbjct: 3    RRNDLQKILLIGSGPIVIGQACEFDYSGTQACKALRDEGYEVILVNSNPATIMTDPETAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
            RTY+ P+TPE+V +++EKERPDALLPTMGGQTALNLAVALA+ G LEKYGVELIGAKL A
Sbjct: 63   RTYVEPLTPEVVAKIIEKERPDALLPTMGGQTALNLAVALAKDGTLEKYGVELIGAKLPA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I+ AEDR LFK+AM+ IGV   PSG+  TL+E   I ++IG +PLIIRPAFTLGGTGGGI
Sbjct: 123  IEMAEDRKLFKEAMERIGVGVCPSGLATTLEEAREIGHQIGSYPLIIRPAFTLGGTGGGI 182

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEFE I ++GL AS  SQ+L+EKSLLGWKEYELEVMRDLADNVVIICSIEN+DPMG
Sbjct: 183  AYNQEEFEEIAQSGLDASPVSQILIEKSLLGWKEYELEVMRDLADNVVIICSIENLDPMG 242

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQRLRD SI IIREIGVE GGSN+QF+VNP  GEV+VIEMN
Sbjct: 243  VHTGDSITVAPAQTLTDKEYQRLRDASIKIIREIGVETGGSNIQFSVNPDTGEVIVIEMN 302

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRF 447
            PRVSRSSALASKATGFPIAKMAAKL+VGY+LD+IPNDITKKTPASFEP+IDYVVTKIPRF
Sbjct: 303  PRVSRSSALASKATGFPIAKMAAKLAVGYTLDEIPNDITKKTPASFEPTIDYVVTKIPRF 362

Query: 448  AFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDWE 507
            AFEKFP ++P+LTTQMKSVGEAMA+GRTFQESFQKALRSLE G +GWGC   +++    E
Sbjct: 363  AFEKFPDAQPVLTTQMKSVGEAMAIGRTFQESFQKALRSLETGRAGWGCDKQEKIP-SLE 421

Query: 508  QLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSVS 567
             ++ +LR PNP+R+  I  A   GM V+EI+EL+ ID WFL + +EL++ E+FL   S+ 
Sbjct: 422  HIRANLRTPNPERIFTIRHAFLMGMGVEEIYELTAIDPWFLDKLQELLETEKFLKRSSLK 481

Query: 568  NMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTPY 627
             +TK+   ++KR+GFSD+QIAFATK+TE EVR  R SLGVIP YK VDTCAAEFEA TPY
Sbjct: 482  GLTKEQMLDIKRQGFSDRQIAFATKTTEDEVRAHRKSLGVIPVYKTVDTCAAEFEALTPY 541

Query: 628  MYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSNP 687
             YS+Y+ E E  P+ K+KV+ILGGGPNRIGQGIEFDYCCCH SF+L++ G+ETIM+NSNP
Sbjct: 542  YYSTYETETEVLPSDKRKVMILGGGPNRIGQGIEFDYCCCHASFALRADGFETIMVNSNP 601

Query: 688  ETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHRL 747
            ETVSTDYDTSDRLYFEPLT EDVLN+I+ E+PEGII+QFGGQTPLKL+LP+ +YL+    
Sbjct: 602  ETVSTDYDTSDRLYFEPLTKEDVLNIIEAEQPEGIIIQFGGQTPLKLALPLQKYLE---- 657

Query: 748  PSASGDGL-VRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEIG 806
              A+ D +  +IWGTSPDSID AEDRERF  I++ L+I QP  GIA+S  +AL IA+ IG
Sbjct: 658  --ANADTISTQIWGTSPDSIDTAEDRERFEKILRALNIRQPSNGIARSTREALEIARRIG 715

Query: 807  YPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALAD 866
            YPVVVRPSYVLGGRAMEIVY D  L  Y+  AV+V+P+ P+L+D+YL +A+EIDVDA+AD
Sbjct: 716  YPVVVRPSYVLGGRAMEIVYNDTELEHYMTYAVQVEPDHPILVDQYLENAVEIDVDAIAD 775

Query: 867  SCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNC 926
            + G+VVIGGIMEHIEQAG+HSGDSAC +P+ ++S + L+ I +WTI+LAK L V GLMN 
Sbjct: 776  ATGHVVIGGIMEHIEQAGIHSGDSACSLPSVSLSPTVLEQIRTWTIELAKALKVVGLMNI 835

Query: 927  QYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPKH 986
            Q+A      VY+LEANPRASRTVPFVSKAIG PLAK AA +MSGK+L +L + +EV+P H
Sbjct: 836  QFA-AQGEQVYILEANPRASRTVPFVSKAIGVPLAKNAARIMSGKTLTELNYIQEVLPAH 894

Query: 987  VSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVFL 1046
            ++VKEAVLPFEKF G D +LGPEMRSTGEVMGID +F  A+AKA+IAA Q+LPL GTVF+
Sbjct: 895  IAVKEAVLPFEKFSGTDPILGPEMRSTGEVMGIDANFGTAYAKAEIAANQRLPLKGTVFV 954

Query: 1047 SLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVAN 1106
            S+ D  KP +  + K  +D+GF IV+T GT   L   G+ VE V K+HEGRPH  D + N
Sbjct: 955  SMGDRDKPAVVPVVKDLIDLGFHIVATQGTRRVLMEHGLEVELVFKLHEGRPHVIDWIKN 1014

Query: 1107 GQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTVTMTA 1166
             QIQ+++   +G+   ++DG  +RR  L YK+P++TT++GA A   AIRSL+S  +++ A
Sbjct: 1015 EQIQLIINNPTGEEA-RMDGRTIRRTALLYKIPIVTTLAGAKATTAAIRSLQSQALSVKA 1073

Query: 1167 LQDFF 1171
            LQ++ 
Sbjct: 1074 LQEYL 1078


>gi|427709358|ref|YP_007051735.1| carbamoyl-phosphate synthase large subunit [Nostoc sp. PCC 7107]
 gi|427361863|gb|AFY44585.1| carbamoyl-phosphate synthase large subunit [Nostoc sp. PCC 7107]
          Length = 1088

 Score = 1541 bits (3991), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 735/1087 (67%), Positives = 892/1087 (82%), Gaps = 11/1087 (1%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            +R DL+KIL+LG+GPIVIGQACEFDYSGTQACKAL+EEGYEV+L+NSNPATIMTDP  AD
Sbjct: 3    RRQDLKKILLLGSGPIVIGQACEFDYSGTQACKALREEGYEVVLVNSNPATIMTDPETAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
            RTYI P+TPELV +V+ KERPDALLPTMGGQTALNLAVAL+++G L++Y VELIGAKL A
Sbjct: 63   RTYIEPLTPELVAKVIAKERPDALLPTMGGQTALNLAVALSKNGVLDQYNVELIGAKLGA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I+KAEDR LF +AM  IGV   PSG  ++L+E  +IA +IG +PLIIRPAFT+GGTGGGI
Sbjct: 123  IEKAEDRKLFNEAMAKIGVHVCPSGTASSLEESKAIARKIGSYPLIIRPAFTMGGTGGGI 182

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEFE + + G+ AS  SQ+L+++SLLGWKEYELEVMRDLADNVVIICSIEN+DPMG
Sbjct: 183  AYNQEEFEEMAQVGIDASPVSQILIDQSLLGWKEYELEVMRDLADNVVIICSIENIDPMG 242

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            +HTGDSITVAPAQTLTDKEYQRLRD SI IIREIGVE GGSN+QFAVNPV G+V+VIEMN
Sbjct: 243  IHTGDSITVAPAQTLTDKEYQRLRDMSIKIIREIGVETGGSNIQFAVNPVTGDVVVIEMN 302

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRF 447
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD+I NDITKKTPASFEP+IDYVVTKIPRF
Sbjct: 303  PRVSRSSALASKATGFPIAKIAAKLAVGYTLDEINNDITKKTPASFEPTIDYVVTKIPRF 362

Query: 448  AFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDWE 507
            AFEKFPGSEP+LTTQMKSVGEAMA+GRTF ESFQKALRSLE G +GWGC   ++L    E
Sbjct: 363  AFEKFPGSEPVLTTQMKSVGEAMAIGRTFNESFQKALRSLETGRAGWGCDKAEKLP-SGE 421

Query: 508  QLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSVS 567
            Q++  LR PNPDR+ A+  AM+ G+ +DEI+EL+ ID WFL + ++L++ E+F+    + 
Sbjct: 422  QIRALLRTPNPDRIFAVRHAMQVGLTIDEIYELTGIDPWFLDKMQQLLETEKFIKRTPLK 481

Query: 568  NMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTPY 627
             +TK+  Y VKR G+SD+QIAFATK+TE EVR  R  LG++P+YK VDTCAAEFEA TPY
Sbjct: 482  QLTKEQLYAVKREGYSDRQIAFATKTTEDEVRAYRQELGIVPAYKTVDTCAAEFEALTPY 541

Query: 628  MYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSNP 687
             YS+Y+ E E  P+ K KV+ILGGGPNRIGQGIEFDYCCCH +++L  AGYETIM+NSNP
Sbjct: 542  YYSTYEEETEVLPSDKPKVMILGGGPNRIGQGIEFDYCCCHAAYALNGAGYETIMVNSNP 601

Query: 688  ETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHRL 747
            ETVSTDYDTSDRLYFEPLT EDVLN+I+ E P GIIVQFGGQTPLKLSLP+ Q L  H  
Sbjct: 602  ETVSTDYDTSDRLYFEPLTKEDVLNIIEAENPVGIIVQFGGQTPLKLSLPLQQALSIHTS 661

Query: 748  PSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEIGY 807
             S++     +IWGTSPDSID AEDRERF  I+K+L+I QP  GIA+S  DAL +A+ IGY
Sbjct: 662  ASST-----KIWGTSPDSIDTAEDRERFEKILKQLNIAQPPNGIARSYEDALIVARRIGY 716

Query: 808  PVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALADS 867
            PVVVRPSYVLGGRAMEIVY+D  L  Y+  AV+V+PE P+LIDK+L +AIE+DVDA+AD 
Sbjct: 717  PVVVRPSYVLGGRAMEIVYSDTELERYMTFAVQVEPEHPILIDKFLENAIEVDVDAIADH 776

Query: 868  CGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNCQ 927
             G VVIGGIMEHIEQAG+HSGDSAC +P+ ++  + L+ I +WT++LA+ L+V GLMN Q
Sbjct: 777  TGRVVIGGIMEHIEQAGIHSGDSACSLPSISLPPAVLNQIRTWTVQLAQALSVIGLMNIQ 836

Query: 928  YAITTSG----DVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVI 983
            +A+   G     VY+LEANPRASRTVPFVSKA G  LAK A+L+MSGK+L +LGFT+EVI
Sbjct: 837  FAVVGVGSYSPQVYILEANPRASRTVPFVSKATGVQLAKLASLIMSGKTLEELGFTEEVI 896

Query: 984  PKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGT 1043
            P H++VKEAVLPF KF G D +LGPEMRSTGEVMGID  F  AFAKA++AAG++LPL+GT
Sbjct: 897  PSHIAVKEAVLPFNKFPGTDTILGPEMRSTGEVMGIDSDFGRAFAKAELAAGERLPLNGT 956

Query: 1044 VFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDM 1103
            VF+S++D  K     + K F+D+GF +++T GT   L    ++VE VLK+HEGRPH  D 
Sbjct: 957  VFVSMSDRDKSAAVSVVKEFIDLGFTVMATFGTRQVLRENNLSVELVLKLHEGRPHVLDA 1016

Query: 1104 VANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTVT 1163
            + N +IQ+++ T SG+     D   +RR  LAYK+P+ITT++GA A   AIRSL++ T+ 
Sbjct: 1017 IKNQKIQLIINTPSGEEA-HTDARLIRRTALAYKIPIITTIAGAKATVAAIRSLQNTTLD 1075

Query: 1164 MTALQDF 1170
            + ALQD+
Sbjct: 1076 VKALQDY 1082


>gi|427731957|ref|YP_007078194.1| carbamoyl-phosphate synthase large subunit [Nostoc sp. PCC 7524]
 gi|427367876|gb|AFY50597.1| carbamoyl-phosphate synthase, large subunit [Nostoc sp. PCC 7524]
          Length = 1086

 Score = 1540 bits (3986), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 735/1087 (67%), Positives = 894/1087 (82%), Gaps = 11/1087 (1%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            +R DL+KIL+LG+GPIVIGQACEFDYSGTQACKAL+EEGYEV+L+NSNPATIMTDP  AD
Sbjct: 3    RRQDLQKILLLGSGPIVIGQACEFDYSGTQACKALREEGYEVVLVNSNPATIMTDPETAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
            RTYI P+TPELV +V+ KERPDALLPTMGGQTALN+AV LA++G L++Y VELIGAKL+A
Sbjct: 63   RTYIEPLTPELVAKVIAKERPDALLPTMGGQTALNIAVTLAKNGVLDQYNVELIGAKLEA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I+KAEDR LF +AM  IGVK  PSG  ++L+E  +IA +IG +PLIIRPAFT+GGTGGGI
Sbjct: 123  IEKAEDRKLFNEAMAKIGVKVCPSGTASSLEESKAIARQIGTYPLIIRPAFTMGGTGGGI 182

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEFE + + G+ AS  SQ+L+++SLLGWKEYELEVMRDLADNVVIICSIEN+DPMG
Sbjct: 183  AYNQEEFEEMAQVGIDASPVSQILIDQSLLGWKEYELEVMRDLADNVVIICSIENLDPMG 242

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            +HTGDSITVAPAQTLTDKEYQRLRD +I IIREIGVE GGSN+QFAVNPVDG+V+VIEMN
Sbjct: 243  IHTGDSITVAPAQTLTDKEYQRLRDMAIKIIREIGVETGGSNIQFAVNPVDGDVVVIEMN 302

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRF 447
            PRVSRSSAL+SKATGFPIAKMAAKL+VGY+LD+I NDITKKTPASFEP+IDYVVTKIPRF
Sbjct: 303  PRVSRSSALSSKATGFPIAKMAAKLAVGYTLDEIKNDITKKTPASFEPTIDYVVTKIPRF 362

Query: 448  AFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDWE 507
            AFEKFPGSEP+LTTQMKSVGEAMA+GRTF ESFQKALRSLE G +GWGC   ++L    E
Sbjct: 363  AFEKFPGSEPVLTTQMKSVGEAMAIGRTFNESFQKALRSLETGRAGWGCDKAEKLP-SGE 421

Query: 508  QLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSVS 567
            Q++  LR PNPDR+ A+  A++ G+  +EI+EL+ ID WFL + ++L++VE+FL    + 
Sbjct: 422  QIRALLRTPNPDRIFAVRHALQLGISSEEIYELTGIDPWFLDKMQQLLEVEKFLKRTPLQ 481

Query: 568  NMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTPY 627
             +TK+  Y +KR GFSD+QIAFATK+TE EVR  R  L VIP YK VDTCAAEFEA TPY
Sbjct: 482  QLTKEQMYAIKRDGFSDRQIAFATKTTEDEVRAYRKQLEVIPVYKTVDTCAAEFEAFTPY 541

Query: 628  MYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSNP 687
             YS+Y+ E E  PT K KV+ILGGGPNRIGQGIEFDYCCCH +++L+ AGYETIM+NSNP
Sbjct: 542  YYSTYEDETEVLPTTKPKVMILGGGPNRIGQGIEFDYCCCHAAYALKGAGYETIMVNSNP 601

Query: 688  ETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHRL 747
            ETVSTDYDTSDRLYFEPLT EDVLN+I+ E P+GIIVQFGGQTPLKL+LP+ Q L     
Sbjct: 602  ETVSTDYDTSDRLYFEPLTKEDVLNIIEAENPQGIIVQFGGQTPLKLALPLQQALS---- 657

Query: 748  PSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEIGY 807
             S       +IWGTSPDSID AEDRERF  I+K+L+I QP  GIA+S  DAL +AK IGY
Sbjct: 658  -SQDSALTTKIWGTSPDSIDTAEDRERFEQILKQLNIAQPPNGIARSYEDALIVAKRIGY 716

Query: 808  PVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALADS 867
            PVVVRPSYVLGGRAMEIVY+D  L  Y+  AV+V+P+ P+LIDK+L +AIE+DVDA+AD 
Sbjct: 717  PVVVRPSYVLGGRAMEIVYSDAELERYMTFAVQVEPDHPILIDKFLENAIEVDVDAIADH 776

Query: 868  CGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNCQ 927
             G VVIGGIMEHIEQAG+HSGDSAC +P+ ++  + LD I +WT++LA+ L+V GLMN Q
Sbjct: 777  SGRVVIGGIMEHIEQAGIHSGDSACSLPSISLPPAVLDQIRTWTVQLAQALSVVGLMNIQ 836

Query: 928  YAI----TTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVI 983
            +A+    + S  VY+LEANPRASRTVPFVSKA G PLAK A+L+MSGK+L +L FT+E+I
Sbjct: 837  FAVVGASSYSPQVYILEANPRASRTVPFVSKATGVPLAKLASLIMSGKTLEELNFTQEII 896

Query: 984  PKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGT 1043
            PKH++VKEAVLPF KF G D +LGPEMRSTGEVMGID  F  AFAKA++ AG++LPL+GT
Sbjct: 897  PKHIAVKEAVLPFNKFPGTDTILGPEMRSTGEVMGIDSDFGRAFAKAELGAGERLPLTGT 956

Query: 1044 VFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDM 1103
            VF+S++D  K     + + F+D+GFK+++T GT   L   G+ VE VLK+HEGRPH  D 
Sbjct: 957  VFVSMSDRDKAAAVPVVREFIDLGFKVMATFGTRQVLSEHGLDVELVLKLHEGRPHVIDA 1016

Query: 1104 VANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTVT 1163
            + N +IQ+++ T SG+   Q D   +RR GLAYK+P+ITT++GA A   AIRSL++ T+ 
Sbjct: 1017 IKNQKIQLIINTPSGEEA-QTDARLIRRTGLAYKIPIITTIAGAKATVAAIRSLQNTTLD 1075

Query: 1164 MTALQDF 1170
            +  +Q++
Sbjct: 1076 VKVIQEY 1082


>gi|186685843|ref|YP_001869039.1| carbamoyl phosphate synthase large subunit [Nostoc punctiforme PCC
            73102]
 gi|186468295|gb|ACC84096.1| carbamoyl-phosphate synthase, large subunit [Nostoc punctiforme PCC
            73102]
          Length = 1087

 Score = 1539 bits (3985), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 734/1088 (67%), Positives = 898/1088 (82%), Gaps = 13/1088 (1%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            +R DLRKIL+LG+GPIVIGQACEFDYSGTQACKAL+EEGYEV+L+NSNPATIMTDP  AD
Sbjct: 3    RRDDLRKILLLGSGPIVIGQACEFDYSGTQACKALREEGYEVVLVNSNPATIMTDPETAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
            RTYI P+TPELVE+V+EKERPDALLPTMGGQTALNLAVALA++G LEKYGVELIGAKL A
Sbjct: 63   RTYIEPLTPELVEKVIEKERPDALLPTMGGQTALNLAVALAKNGVLEKYGVELIGAKLPA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I+KAEDR LF +AM  IGV   PS    TL+E  ++A +IG +PLIIRPAFT+GG+GGGI
Sbjct: 123  IEKAEDRKLFGEAMARIGVAVCPSDTAETLEEAKAVARQIGSYPLIIRPAFTMGGSGGGI 182

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEFE + + G+ AS  SQ+L+++SLLGWKEYELEVMRDLADNVVIICSIEN+DPMG
Sbjct: 183  AYNQEEFEEMAQVGIDASPVSQILIDQSLLGWKEYELEVMRDLADNVVIICSIENLDPMG 242

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            +HTGDSITVAPAQTLTDKEYQRLRD +I IIREIGVE GGSN+QFAVNP++G+V+VIEMN
Sbjct: 243  IHTGDSITVAPAQTLTDKEYQRLRDMAIKIIREIGVETGGSNIQFAVNPLNGDVVVIEMN 302

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRF 447
            PRVSRSSAL+SKATGFPIAKMAAKL+VGY+LD+I NDITKKTPASFEP+IDYVVTKIPRF
Sbjct: 303  PRVSRSSALSSKATGFPIAKMAAKLAVGYTLDEIKNDITKKTPASFEPTIDYVVTKIPRF 362

Query: 448  AFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDWE 507
            AFEKFPGS+P+LTTQMKSVGEAMA+GRTF ESFQKALRSLE G +GWGC   ++L    E
Sbjct: 363  AFEKFPGSDPVLTTQMKSVGEAMAIGRTFNESFQKALRSLETGRAGWGCDKAEKLP-SGE 421

Query: 508  QLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSVS 567
            Q++  LR PNPDR+ A+  A+++GM ++EI+EL+ ID+WFL + ++L+DVE+FL    + 
Sbjct: 422  QIRAQLRTPNPDRIFAVRHALQQGMTIEEIYELTGIDRWFLDKLQQLLDVEKFLKRTPLQ 481

Query: 568  NMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTPY 627
             +TK+  YEVKR G+SD+QIA+ATK+TE EVR  R SLG+IP YK VDTCAAEFEA TPY
Sbjct: 482  QLTKEQIYEVKRDGYSDRQIAYATKTTEDEVRAYRKSLGIIPVYKTVDTCAAEFEAFTPY 541

Query: 628  MYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSNP 687
             YS+Y+ E E  P  K KVLILGGGPNRIGQGIEFDYCCCH +++L+ AGYETIM+NSNP
Sbjct: 542  YYSTYEEETEVMPATKPKVLILGGGPNRIGQGIEFDYCCCHAAYALKDAGYETIMVNSNP 601

Query: 688  ETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHRL 747
            ETVSTDYDTSDRLYFEPLT EDVLN+I+ E P GII+QFGGQTPLKL++P+ ++L+    
Sbjct: 602  ETVSTDYDTSDRLYFEPLTKEDVLNIIETENPVGIIIQFGGQTPLKLAIPLQEFLNNDT- 660

Query: 748  PSASGDGL-VRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEIG 806
                  GL  +IWGTSPDSID AE+RERF  I++EL+I QP  GIA+S  DAL +AK IG
Sbjct: 661  -----SGLNTKIWGTSPDSIDMAENRERFEKILQELNIAQPPNGIARSYEDALIVAKRIG 715

Query: 807  YPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALAD 866
            YPVVVRPSYVLGGRAMEIVY+D  L  Y+  AV ++PE P+LIDK+L +AIE+DVDA+AD
Sbjct: 716  YPVVVRPSYVLGGRAMEIVYSDAELERYMSFAVLIEPEHPILIDKFLENAIEVDVDAIAD 775

Query: 867  SCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNC 926
              G VVIGGIMEHIEQAG+HSGDSAC +P+ ++S + L+ I +WT++LA+ L+V GLMN 
Sbjct: 776  HTGRVVIGGIMEHIEQAGIHSGDSACSLPSISLSPAVLNQIRTWTVQLAQALSVVGLMNI 835

Query: 927  QYAI----TTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEV 982
            Q+A+    + S  VY+LEANPRASRTVPFVSKA G  LAK A+L+MSGK+L +LGFT+EV
Sbjct: 836  QFAVVGASSYSPQVYILEANPRASRTVPFVSKATGVQLAKLASLIMSGKTLEELGFTEEV 895

Query: 983  IPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSG 1042
            IP H++VKEAVLPF KF G D +LGPEMRSTGEVMGID  F  AFAKA++ AG++LPL+G
Sbjct: 896  IPTHIAVKEAVLPFNKFPGTDTILGPEMRSTGEVMGIDSDFGRAFAKAELGAGERLPLTG 955

Query: 1043 TVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGD 1102
            TVF+S++D  K     + K F+D+GF +++T GT   L  +G+ +E VLK+HEGRPH  D
Sbjct: 956  TVFVSMSDRDKAAAGAVVKEFIDLGFTVMATLGTRRVLLEQGLNIELVLKLHEGRPHVLD 1015

Query: 1103 MVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTV 1162
             + N +IQ+++ T SG+     D   +RR  LAYK+P+ITT++GA A   AIRSL++ T+
Sbjct: 1016 AIKNQKIQLIINTPSGEEA-HTDARLIRRTALAYKIPIITTIAGAKATVAAIRSLQNTTL 1074

Query: 1163 TMTALQDF 1170
             +  +Q++
Sbjct: 1075 DVKTIQEY 1082


>gi|443476649|ref|ZP_21066544.1| carbamoyl-phosphate synthase large subunit [Pseudanabaena biceps PCC
            7429]
 gi|443018356|gb|ELS32621.1| carbamoyl-phosphate synthase large subunit [Pseudanabaena biceps PCC
            7429]
          Length = 1083

 Score = 1538 bits (3982), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 743/1089 (68%), Positives = 891/1089 (81%), Gaps = 15/1089 (1%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            +R D+ KIL++GAGPIVIGQACEFDYSGTQACK L++EGY VIL+NSNPATIMTDP  AD
Sbjct: 3    RRNDIHKILLIGAGPIVIGQACEFDYSGTQACKVLRDEGYYVILVNSNPATIMTDPATAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
            RTYI P+TPE+V Q++EKERPDA+LPTMGGQTALN AVALA+SG LEKYGVELIGAKLDA
Sbjct: 63   RTYIEPITPEVVAQIIEKERPDAILPTMGGQTALNTAVALAKSGVLEKYGVELIGAKLDA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I+ AEDR LFK+AM+ IGV   PSG+G T++E  +IA EIG +PLIIRPAFT+GGTGGGI
Sbjct: 123  IEMAEDRKLFKEAMERIGVAMCPSGLGTTMEESRAIAQEIGSYPLIIRPAFTMGGTGGGI 182

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEFE IC +GL AS  SQ+L+E+SL+GWKEYELEVMRDLADNVVIICSIEN+DPMG
Sbjct: 183  AYNQEEFEEICASGLEASPVSQILIERSLIGWKEYELEVMRDLADNVVIICSIENIDPMG 242

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            +HTGDSITVAPAQTLTDKEYQRLRDYSI IIREIGVE GGSN+QF++NP +GEV+VIEMN
Sbjct: 243  IHTGDSITVAPAQTLTDKEYQRLRDYSIKIIREIGVETGGSNIQFSINPENGEVVVIEMN 302

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRF 447
            PRVSRSSALASKATGFPIAK AAKL+VGY+LD+I NDITKKTPASFEP+IDYVVTKIPRF
Sbjct: 303  PRVSRSSALASKATGFPIAKFAAKLAVGYTLDEISNDITKKTPASFEPTIDYVVTKIPRF 362

Query: 448  AFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDWE 507
            AFEKFPGSEP+LTTQMKSVGEAMA+GRTFQESFQKALRSLE G  G+G  + +E+  D +
Sbjct: 363  AFEKFPGSEPILTTQMKSVGEAMAIGRTFQESFQKALRSLEVGRFGFG-GDREEVLPDLD 421

Query: 508  QLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSVS 567
            ++KYSLR PNPDR+ +I      G+ V  I EL+ ID WFL + +E+ DVE  +  + + 
Sbjct: 422  KIKYSLRTPNPDRIFSIRDGFLSGLSVQAIFELTNIDPWFLQKMREITDVELAIKGRKLD 481

Query: 568  NMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTPY 627
             + KD+  E+KR GFSD+QIA+ T + E  VR  R SLGVIPSYK VDTCAAEFEA TPY
Sbjct: 482  AILKDELLEIKRMGFSDRQIAYLTGTHEDTVRTYRKSLGVIPSYKTVDTCAAEFEALTPY 541

Query: 628  MYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSNP 687
             YS+Y+ E E  P+ K+KV+ILGGGPNRIGQGIEFDYCCCH S++L++AG+ETIM+NSNP
Sbjct: 542  HYSTYEEESEILPSTKRKVMILGGGPNRIGQGIEFDYCCCHASYALRAAGFETIMVNSNP 601

Query: 688  ETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHRL 747
            ETVSTDYDTSDRLYFEPLT EDVLN+I+ E PEG+I+QFGGQTPLKLS+P+ +YL+EH  
Sbjct: 602  ETVSTDYDTSDRLYFEPLTREDVLNIIEAENPEGVIIQFGGQTPLKLSVPLLRYLEEH-- 659

Query: 748  PSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEIGY 807
                 +   +IWGTSPDSID AEDRERF AI +EL I QP+ G+A+SE +A+AIA+ +GY
Sbjct: 660  -----NSTTKIWGTSPDSIDIAEDRERFEAICQELGITQPQNGLARSEDEAVAIAQRVGY 714

Query: 808  PVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALADS 867
            PVVVRPSYVLGGR ME+VY+D  L  Y+  A+ ++PE PVLID +L  AIE+DVDA+AD 
Sbjct: 715  PVVVRPSYVLGGRGMEVVYSDAELEDYMRRAIIIEPEHPVLIDHFLEGAIEVDVDAIADQ 774

Query: 868  CGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNCQ 927
             GNV IGGIMEHIE+AG+HSGDSAC IPT ++    L TI  WTI LAK LNV GLMN Q
Sbjct: 775  LGNVTIGGIMEHIEEAGIHSGDSACSIPTFSLPPEVLATIRQWTISLAKSLNVIGLMNIQ 834

Query: 928  YAITTSGD------VYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKE 981
            YA+  + +      V++LEANPRASRTVP+VSKAI  PL  YA+ +M+G +L +LG T+E
Sbjct: 835  YAVQLNNNNLKESKVFILEANPRASRTVPYVSKAINVPLVNYASRIMAGATLAELGLTEE 894

Query: 982  VIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLS 1041
            VIPKH+S+KEAVLPF KF G D +LGPEMRSTGEVMGID  F  AFAKAQIAAG  LPL 
Sbjct: 895  VIPKHISIKEAVLPFAKFAGTDTILGPEMRSTGEVMGIDTEFGRAFAKAQIAAGTHLPLE 954

Query: 1042 GTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAG 1101
            GTVFLS+ND  K  +  IA+AF+++GFKIV+T GT   L    I  ++VLK+HEGRPH G
Sbjct: 955  GTVFLSVNDRDKSGITSIAEAFIELGFKIVATEGTYKILRRNNIESKQVLKVHEGRPHIG 1014

Query: 1102 DMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNT 1161
            D + NG+IQ++V + SG+   + DG  +RR  LAYK+PVITT++GA A   AIRSL++  
Sbjct: 1015 DSMKNGKIQLIVNSPSGEEA-KTDGKMIRRTALAYKIPVITTLAGAKAAIAAIRSLQTGA 1073

Query: 1162 VTMTALQDF 1170
            +++TALQD+
Sbjct: 1074 ISVTALQDY 1082


>gi|303279222|ref|XP_003058904.1| predicted protein [Micromonas pusilla CCMP1545]
 gi|226460064|gb|EEH57359.1| predicted protein [Micromonas pusilla CCMP1545]
          Length = 1107

 Score = 1537 bits (3979), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 751/1087 (69%), Positives = 882/1087 (81%), Gaps = 3/1087 (0%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++KI+I+GAGPIVIGQACEFDYSGTQACKAL+ EGYEV+L+NSNPATIMTDP  A 
Sbjct: 21   KRTDIKKIMIIGAGPIVIGQACEFDYSGTQACKALRSEGYEVVLLNSNPATIMTDPETAS 80

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
            RTY+ PMTPELVE++L+KE+PDALLPTMGGQTALNL   LAE+G LEKY VELIGAKLDA
Sbjct: 81   RTYVGPMTPELVEEILKKEKPDALLPTMGGQTALNLTKTLAETGILEKYNVELIGAKLDA 140

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR LFK AM  IG+KTPPSG  NT +E + I  EIG FPLIIRPAFTLGG+GGGI
Sbjct: 141  INKAEDRQLFKDAMTKIGLKTPPSGTANTWEEALKIQEEIGNFPLIIRPAFTLGGSGGGI 200

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN EE+E I   GL AS T+QVL+EKSLLGWKEYELEVMRDLADNVVI+CSIEN+DPMG
Sbjct: 201  AYNMEEYENIVTGGLNASSTTQVLIEKSLLGWKEYELEVMRDLADNVVIVCSIENLDPMG 260

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSIT+APAQTLTDKEYQRLRD S+ IIREIGVECGGSNVQ AVNP DGE+M+IEMN
Sbjct: 261  VHTGDSITIAPAQTLTDKEYQRLRDASVDIIREIGVECGGSNVQMAVNPEDGELMIIEMN 320

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRF 447
            PRVSRSSALASKATGFPIAKMAAKL+VG +LD IPNDIT KTPASFEPSIDYV+TKIPRF
Sbjct: 321  PRVSRSSALASKATGFPIAKMAAKLAVGCTLDGIPNDITLKTPASFEPSIDYVITKIPRF 380

Query: 448  AFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCS-NVKELDWDW 506
            AFEKFPGSEP LTTQMKSVGEAMA+GRT+QESF KALRSLE G SGWG +    EL  D 
Sbjct: 381  AFEKFPGSEPYLTTQMKSVGEAMAVGRTWQESFNKALRSLETGLSGWGLNPKDGELQGDL 440

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
              LK  L    P R+  I+ A   GM  +EI +++  D WFL Q ++L + E +L + S 
Sbjct: 441  VALKEKLAEATPARITVIHEAFLAGMTPEEIQDITKFDPWFLRQMQDLFETETWLKSLSS 500

Query: 567  SNMT-KDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANT 625
             +   K+D++EVK+RG+SD QIA A K TE +VR+ R +LGV  S KRVDTCAAEFEA T
Sbjct: 501  LSELDKNDWFEVKKRGYSDVQIARALKITEGKVRKARKALGVTASMKRVDTCAAEFEAET 560

Query: 626  PYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNS 685
            PYMYS+YD   E  PT K+K+LILGGGPNRIGQGIEFDYCCCH +FSL+ AGYETIM+NS
Sbjct: 561  PYMYSTYDGNDEVDPTDKRKILILGGGPNRIGQGIEFDYCCCHAAFSLKDAGYETIMLNS 620

Query: 686  NPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEH 745
            NPETVSTDYDTSDRLYFEPLTVEDVLNV++ ERPEGIIVQFGGQTPL L+  + + L + 
Sbjct: 621  NPETVSTDYDTSDRLYFEPLTVEDVLNVVEAERPEGIIVQFGGQTPLSLATRLEKALMDD 680

Query: 746  RLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEI 805
             +P+ASG+G   I GT PDSIDAAEDRER+ AI++EL I QP GG+A+SEA+AL  A  I
Sbjct: 681  PIPAASGNGNCHILGTPPDSIDAAEDRERWQAILEELKITQPPGGVARSEAEALVAANNI 740

Query: 806  GYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALA 865
            GYPV+VRPS+VLGGRAMEIV +D  L  Y+  AVEVDPE+PVL+DKYL++A E+DVDAL 
Sbjct: 741  GYPVMVRPSFVLGGRAMEIVSSDADLKRYITTAVEVDPEKPVLVDKYLANATELDVDALC 800

Query: 866  DSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMN 925
            D+ GNVVI GIMEHIEQAGVHSGDSAC IP +TIS   L  I  WT K+AKRL V GL+N
Sbjct: 801  DAEGNVVICGIMEHIEQAGVHSGDSACSIPPQTISEKSLAIIRDWTPKVAKRLGVIGLIN 860

Query: 926  CQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPK 985
             Q+A+T + +VY++EANPRASRTVPFV+KAIGHPLAKYA+LVM+G +L D+ FT+EV+  
Sbjct: 861  IQWAVTPNDEVYIIEANPRASRTVPFVAKAIGHPLAKYASLVMAGATLKDINFTEEVVID 920

Query: 986  HVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPL-SGTV 1044
            HV+VKEAVLPF+KF G D LLGPEMRSTGEVMGID  F  A+AKAQIAAGQ+LP  +G V
Sbjct: 921  HVAVKEAVLPFDKFPGADTLLGPEMRSTGEVMGIDRDFTRAYAKAQIAAGQRLPNGTGKV 980

Query: 1045 FLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMV 1104
            F+S+ D  KP +  IAK   +IG  +V+T GTA  L+  G+ V    K+HEGRPH GDM+
Sbjct: 981  FISVRDSDKPAVTEIAKQLSEIGMTLVATGGTAAALKDAGLPVTVAKKVHEGRPHIGDML 1040

Query: 1105 ANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTVTM 1164
             +G I +MV+TS+GD  D  DG ++RR  +  K+P++TT++GA A A A++ L+  T++M
Sbjct: 1041 RDGDIALMVVTSNGDEADMRDGREIRRTAVGLKIPMVTTIAGARATANAVKVLQEGTLSM 1100

Query: 1165 TALQDFF 1171
             ALQDFF
Sbjct: 1101 DALQDFF 1107


>gi|282896367|ref|ZP_06304388.1| Carbamoyl-phosphate synthase, large subunit, glutamine-dependent
            [Raphidiopsis brookii D9]
 gi|281198655|gb|EFA73535.1| Carbamoyl-phosphate synthase, large subunit, glutamine-dependent
            [Raphidiopsis brookii D9]
          Length = 1083

 Score = 1535 bits (3973), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 732/1087 (67%), Positives = 889/1087 (81%), Gaps = 12/1087 (1%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            +R D+ KIL+LG+GPIVIGQACEFDYSGTQACKAL+EEG+EV+L+NSNPATIMTDP  AD
Sbjct: 3    RRQDIHKILLLGSGPIVIGQACEFDYSGTQACKALREEGFEVVLVNSNPATIMTDPETAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
            RTYI P+TPE+V +V+ KERPDALLPTMGGQTALN+AVALA++G LE+Y VELIGAKL A
Sbjct: 63   RTYIEPLTPEMVAKVIAKERPDALLPTMGGQTALNIAVALAKNGVLEEYNVELIGAKLPA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I+KAEDR LF  AM+ IGV   PSG  +TL+E  +IA  IG +PLIIRPAFT+GGTGGGI
Sbjct: 123  IEKAEDRKLFNDAMEKIGVSVCPSGTASTLEESKAIAQRIGSYPLIIRPAFTMGGTGGGI 182

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYNKEEFE + + G+ AS  SQ+L+++SLLGWKEYELEVMRDLADNVVIICSIEN+DPMG
Sbjct: 183  AYNKEEFEVMAQVGIDASPVSQILIDQSLLGWKEYELEVMRDLADNVVIICSIENLDPMG 242

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            +HTGDSITVAPAQTLTDKEYQRLRD +I IIREIGVE GGSN+QFAVNPV+G+V+VIEMN
Sbjct: 243  IHTGDSITVAPAQTLTDKEYQRLRDMAIKIIREIGVETGGSNIQFAVNPVNGDVVVIEMN 302

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRF 447
            PRVSRSSALASKATGFPIAKMAAKL+VGY+LD+I NDITKKTPASFEP+IDYVVTKIPRF
Sbjct: 303  PRVSRSSALASKATGFPIAKMAAKLAVGYTLDEIKNDITKKTPASFEPTIDYVVTKIPRF 362

Query: 448  AFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDWE 507
            AFEKFPGS+P+LTTQMKSVGEAMA+GRTF ESFQKALRSLE G +GWG    ++L    E
Sbjct: 363  AFEKFPGSDPVLTTQMKSVGEAMAIGRTFNESFQKALRSLETGRAGWGADKAEKLP-SGE 421

Query: 508  QLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSVS 567
            Q++  LR PNP+R+ A+  AM+ GM  +EI+EL+ ID WFL +  ++++ E+FL    + 
Sbjct: 422  QVRAQLRTPNPERIFALRHAMQLGMSNEEIYELTAIDPWFLDKLHQILETEKFLKRTPLQ 481

Query: 568  NMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTPY 627
             +TK   YEVKR GFSD+QIAF TK+ E EVR  R  LGVIP YK VDTCAAEFEA TPY
Sbjct: 482  QLTKVQMYEVKRNGFSDRQIAFCTKTKEDEVRVYRKQLGVIPVYKTVDTCAAEFEAFTPY 541

Query: 628  MYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSNP 687
             YS+Y+ E E  PT K KV+ILGGGPNRIGQGIEFDYCCCH +++L+SA YETIM+NSNP
Sbjct: 542  YYSTYEEETEILPTDKPKVMILGGGPNRIGQGIEFDYCCCHAAYALKSANYETIMVNSNP 601

Query: 688  ETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHRL 747
            ETVSTDYDTSDRLYFEPLT EDVLN+I+ E P GIIVQFGGQTPLKL++P+ +YL +   
Sbjct: 602  ETVSTDYDTSDRLYFEPLTKEDVLNIIEAENPVGIIVQFGGQTPLKLAVPLQEYLQQ--- 658

Query: 748  PSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEIGY 807
               S   + RIWGTSPDSID AE+RERF  I++EL I QP  GIA+S  DAL +AK IGY
Sbjct: 659  ---SPSTVTRIWGTSPDSIDMAENRERFEKILEELKIAQPANGIARSYEDALIVAKRIGY 715

Query: 808  PVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALADS 867
            PVVVRPSYVLGGRAMEIVY+D  L  Y+  AV+V+PE P+LIDK+L +AIE+DVDA+AD 
Sbjct: 716  PVVVRPSYVLGGRAMEIVYSDSELERYMSFAVQVEPEHPILIDKFLENAIEVDVDAIADH 775

Query: 868  CGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNCQ 927
             G VVIGGIMEHIEQAG+HSGDSAC +P+ ++S + L+ I +WT++LAK L+V GLMN Q
Sbjct: 776  QGRVVIGGIMEHIEQAGIHSGDSACSLPSISLSPAVLNQIRTWTVELAKALSVVGLMNIQ 835

Query: 928  YAI----TTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVI 983
            +A+    + S  VY+LEANPRASRTVPFVSKA G PLA+ A+L+MSGK+L +L FT+EVI
Sbjct: 836  FAVVGASSYSPQVYILEANPRASRTVPFVSKATGVPLARLASLIMSGKTLEELNFTREVI 895

Query: 984  PKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGT 1043
            P+H++VKEAVLPF KF G D LLGPEMRSTGEVMGID+ F  AFAKA++ AG+KLPL GT
Sbjct: 896  PQHIAVKEAVLPFNKFPGTDTLLGPEMRSTGEVMGIDVDFGRAFAKAEMGAGEKLPLQGT 955

Query: 1044 VFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDM 1103
            VF+S++D  K  +  + K F+ +GFK+++T GT+ FL  +G+ +E +LK+HEGRPH  D 
Sbjct: 956  VFVSMSDRDKSLVVEVIKEFIQLGFKVIATQGTSEFLREQGLKIETILKLHEGRPHVLDA 1015

Query: 1104 VANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTVT 1163
            + N QIQ+++ T SG    + DG  +RR  L YK+P+ITT++GA A   AIRSL++  + 
Sbjct: 1016 IKNRQIQLIINTPSGQEA-RTDGQLIRRTALGYKIPIITTIAGAKATVAAIRSLQNINLD 1074

Query: 1164 MTALQDF 1170
            +  +Q++
Sbjct: 1075 VKTIQEY 1081


>gi|428204016|ref|YP_007082605.1| carbamoyl-phosphate synthase large subunit [Pleurocapsa sp. PCC 7327]
 gi|427981448|gb|AFY79048.1| carbamoyl-phosphate synthase, large subunit [Pleurocapsa sp. PCC
            7327]
          Length = 1091

 Score = 1533 bits (3969), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 745/1086 (68%), Positives = 895/1086 (82%), Gaps = 7/1086 (0%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            +R D+RKIL+LG+GPIVIGQACEFDYSGTQACKAL+EEGYEV+L+NSNPATIMTDP  AD
Sbjct: 3    RRDDIRKILLLGSGPIVIGQACEFDYSGTQACKALREEGYEVVLVNSNPATIMTDPETAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
            RTY+ P+TPE+VE+V+ KE+PDALLPTMGGQTALN+AVALA+SG LEKY +ELIGAKLDA
Sbjct: 63   RTYVEPLTPEIVEKVIAKEKPDALLPTMGGQTALNIAVALAKSGVLEKYNLELIGAKLDA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I+KAEDR+LFK+AM+ IGV   PSGI N ++E  +IA EIG +PLIIRPAFTLGGTGGGI
Sbjct: 123  IEKAEDRELFKKAMQRIGVPVCPSGIANNIEEAKAIAQEIGSYPLIIRPAFTLGGTGGGI 182

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EE+E + + G+ AS  SQ+LVEKSLLGWKEYELEVMRDLADNVVIICSIEN+DPMG
Sbjct: 183  AYNQEEYEQMAQYGIDASPVSQILVEKSLLGWKEYELEVMRDLADNVVIICSIENIDPMG 242

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQRLRDYS AIIREIGVE GGSN+QFAVNPV+GEV+VIEMN
Sbjct: 243  VHTGDSITVAPAQTLTDKEYQRLRDYSKAIIREIGVETGGSNIQFAVNPVNGEVIVIEMN 302

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRF 447
            PRVSRSSALASKATGFPIAK AAKL+VGY+LD+IPNDITKKTPASFEP+IDYVVTKIPRF
Sbjct: 303  PRVSRSSALASKATGFPIAKFAAKLAVGYTLDEIPNDITKKTPASFEPTIDYVVTKIPRF 362

Query: 448  AFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDWE 507
            AFEKFPG++ +LTTQMKSVGEAMA+GRTFQESFQKALRSLE G  G+GC   + L     
Sbjct: 363  AFEKFPGAQAILTTQMKSVGEAMAIGRTFQESFQKALRSLEIGRFGFGCDRQETLP-SLS 421

Query: 508  QLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSVS 567
            Q++ +LR PNP+R+  I+ A   GM V+E++EL+ ID WFL + +EL++ E+FL    + 
Sbjct: 422  QIRANLRTPNPERIFTIHHAFHLGMTVEELYELTAIDPWFLDKMQELVETEKFLKRTPLH 481

Query: 568  NMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTPY 627
             +TK+    +K++GFSD+QIAFATK++E +VR  R  LGVIP YK VDTCAAEFEA TPY
Sbjct: 482  EITKEQMQFIKQQGFSDRQIAFATKTSEDQVRGYRKHLGVIPVYKLVDTCAAEFEAFTPY 541

Query: 628  MYSSYD-FECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSN 686
             YSSY+  E E   ++K+KV+ILGGGPNRIGQGIEFDYCCCH SFSL++AG+ETIM+NSN
Sbjct: 542  YYSSYEPEESEVRSSEKRKVMILGGGPNRIGQGIEFDYCCCHASFSLRNAGFETIMVNSN 601

Query: 687  PETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHR 746
            PETVSTDYDTSDRLYFEPLT EDVLN+I+ ERPEGIIVQFGGQTPLKL++P+ +YLDE  
Sbjct: 602  PETVSTDYDTSDRLYFEPLTKEDVLNIIEAERPEGIIVQFGGQTPLKLAVPLQEYLDERE 661

Query: 747  LPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEIG 806
               A  D + +IWGTSPDSID AEDRERF  I+++L+I QP  GIA+S  ++L+IA  IG
Sbjct: 662  ANGA--DFVPKIWGTSPDSIDIAEDRERFEQILRQLNISQPPNGIARSYQESLSIAGRIG 719

Query: 807  YPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALAD 866
            YPVVVRPSYVLGGRAMEIVY+D+ L  Y+  AV+V+P+RP+LIDK+L +AIE+DVDAL D
Sbjct: 720  YPVVVRPSYVLGGRAMEIVYSDDDLQRYMTYAVQVEPDRPILIDKFLENAIEVDVDALCD 779

Query: 867  SCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNC 926
            S G V+IGGIMEHIE+AGVHSGDSAC IP  ++++S +DTI  WT+KLA+ L V GL+N 
Sbjct: 780  STGKVIIGGIMEHIEEAGVHSGDSACSIPFTSLANSAIDTIRQWTVKLAQALKVVGLINI 839

Query: 927  QYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPKH 986
            QYA+     VY+LEANPRASRTVP+VSKA G PLAK+A+LVMSGK+L  LG T E IP H
Sbjct: 840  QYAVQGE-RVYILEANPRASRTVPYVSKATGIPLAKFASLVMSGKTLESLGVTSEYIPHH 898

Query: 987  VSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVFL 1046
            ++VKEAVLPFEKF G D LLGPEMRSTGEVMGID  F  AFAKA+IAAG +L  +GTVF+
Sbjct: 899  IAVKEAVLPFEKFPGTDTLLGPEMRSTGEVMGIDSDFGRAFAKAEIAAGVRLATTGTVFV 958

Query: 1047 SLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGI-AVERVLKMHEGRPHAGDMVA 1105
            S++D  K     + K  +D+GF++V+T+GT   L   GI  VE VLK+HEGRPH  D + 
Sbjct: 959  SMSDRDKVASVPVVKNLIDLGFRVVATAGTRKVLLENGIDNVELVLKLHEGRPHVIDWIK 1018

Query: 1106 NGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTVTMT 1165
            N  IQ ++ T +G+     D   +RR  L YK+P+ITT++GA A   AIRSL+S  + + 
Sbjct: 1019 NNWIQFIINTPNGEE-SHTDARLIRRTALDYKLPIITTLAGAKATVAAIRSLQSEPLDVK 1077

Query: 1166 ALQDFF 1171
            ALQD+ 
Sbjct: 1078 ALQDYI 1083


>gi|428226191|ref|YP_007110288.1| carbamoyl-phosphate synthase large subunit [Geitlerinema sp. PCC
            7407]
 gi|427986092|gb|AFY67236.1| carbamoyl-phosphate synthase large subunit [Geitlerinema sp. PCC
            7407]
          Length = 1081

 Score = 1532 bits (3967), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 735/1085 (67%), Positives = 896/1085 (82%), Gaps = 9/1085 (0%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            +R DLRKIL+LG+GPIVIGQACEFDYSGTQACKAL++EGYEV+L+NSNPATIMTDP  AD
Sbjct: 3    RRNDLRKILLLGSGPIVIGQACEFDYSGTQACKALRDEGYEVVLVNSNPATIMTDPETAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
            RTYI P+TPELVE+V+EKERPDALLPTMGGQTALNLAVALA++G L++YGVELIGAKL+A
Sbjct: 63   RTYIEPLTPELVEKVIEKERPDALLPTMGGQTALNLAVALAKNGVLDRYGVELIGAKLEA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I+KAEDR LFK+AM+ IGV   PSG+ + + E  +IA  IG +PLIIRPAFTLGGTGGGI
Sbjct: 123  IEKAEDRKLFKEAMERIGVSVCPSGLAHNMVEARAIAERIGTYPLIIRPAFTLGGTGGGI 182

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYNKEE+E +  AG+ AS  SQ+LVE+SL+GWKEYELEVMRDLADNVVIICSIEN+DPMG
Sbjct: 183  AYNKEEYEEMAAAGIDASPVSQILVEQSLIGWKEYELEVMRDLADNVVIICSIENIDPMG 242

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            +HTGDSITVAPAQTLTDKEYQRLRD SI IIREIGVE GGSN+QFAVNP DG  +VIEMN
Sbjct: 243  IHTGDSITVAPAQTLTDKEYQRLRDASIRIIREIGVETGGSNIQFAVNPDDGNFIVIEMN 302

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRF 447
            PRVSRSSALASKATGFPIAK AAKL+VGY+LD+I NDITKKTPASFEP+IDYVVTKIPRF
Sbjct: 303  PRVSRSSALASKATGFPIAKFAAKLAVGYTLDEISNDITKKTPASFEPTIDYVVTKIPRF 362

Query: 448  AFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDWE 507
            AFEKFPG++P LTTQMKSVGEAMA+GRTFQESFQKALRSLE G +GWGC   ++L     
Sbjct: 363  AFEKFPGTQPTLTTQMKSVGEAMAIGRTFQESFQKALRSLEIGRAGWGCDGPEKLP-SLP 421

Query: 508  QLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSVS 567
            Q++  LR PNPDR+  +  AM  G+  +EI++L+ ID WFL + + L++VE+ L    ++
Sbjct: 422  QVRSGLRTPNPDRIFTVRHAMLLGLTNEEIYDLTGIDPWFLDKLQSLLEVEKLLKRTPLT 481

Query: 568  NMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTPY 627
            ++++D  +EVKR+GFSD+QIA+ATK+TE +VR  R  LGV+P+YK VDTCAAEFEA TPY
Sbjct: 482  SLSRDHLWEVKRQGFSDRQIAYATKTTEDDVRAYRKGLGVVPAYKTVDTCAAEFEAFTPY 541

Query: 628  MYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSNP 687
             YS+Y+ E E  P+ ++KV+ILGGGPNRIGQGIEFDYCCCH S++L+  G+ETIM+NSNP
Sbjct: 542  HYSTYETETEVRPSDRRKVVILGGGPNRIGQGIEFDYCCCHASYALREQGFETIMVNSNP 601

Query: 688  ETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHRL 747
            ETVSTDYDTSDRLYFEPLT EDVLN+++ E PEGII+QFGGQTPLKL++P+ ++L     
Sbjct: 602  ETVSTDYDTSDRLYFEPLTKEDVLNILEAENPEGIIIQFGGQTPLKLAVPLAEFLGG--- 658

Query: 748  PSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEIGY 807
                GD   +IWGTSPDSID AEDRERF  I++ L I+QP  G+A+S  +ALA+A+ IGY
Sbjct: 659  -DTKGDVPTQIWGTSPDSIDTAEDRERFEKILRALDIQQPPNGLARSYEEALAVAQRIGY 717

Query: 808  PVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALADS 867
            PVVVRPSYVLGGRAMEIVY+D  L  Y+  AV+V+P+ P+LIDK+L +AIE+DVDA+AD 
Sbjct: 718  PVVVRPSYVLGGRAMEIVYSDAELERYMTFAVQVEPDHPILIDKFLENAIEVDVDAIADQ 777

Query: 868  CGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNCQ 927
             G VVIGGIMEHIEQAG+HSGDSAC IPT T+    L+ I +WTIKLAK L V GLMN Q
Sbjct: 778  TGQVVIGGIMEHIEQAGIHSGDSACSIPTITLGEPVLEVIRTWTIKLAKALKVVGLMNIQ 837

Query: 928  YAITTSGD-VYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPKH 986
            +A+   GD VY+LEANPRASRTVP+VSKAIG PLAKYA+ VMSG++L DL FT+E   +H
Sbjct: 838  FAV--QGDQVYILEANPRASRTVPYVSKAIGVPLAKYASRVMSGETLADLNFTEERSLRH 895

Query: 987  VSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVFL 1046
            V+VKEAVLPFEKF G D +LGPEMRSTGEVMGID  F  AFAKA++AAGQ+LPLSGTVF+
Sbjct: 896  VAVKEAVLPFEKFPGTDTILGPEMRSTGEVMGIDTDFGKAFAKAELAAGQRLPLSGTVFV 955

Query: 1047 SLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVAN 1106
            S+ND  K  +    +  +++GF +V+TSGT   LE  G+ VE VLK+HEGRPH  D + N
Sbjct: 956  SMNDREKQAVVPAVRELINLGFHVVATSGTQRILEENGLNVELVLKVHEGRPHVLDWIKN 1015

Query: 1107 GQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTVTMTA 1166
             ++Q+++ + +G+   Q+D   +RR  L+YK+P+ITT++GA A  +AIRSL+S+ + + A
Sbjct: 1016 QKLQLIINSPAGEEA-QLDDRTIRRTALSYKIPIITTIAGAKATVDAIRSLQSHPLDVKA 1074

Query: 1167 LQDFF 1171
            LQD+ 
Sbjct: 1075 LQDYL 1079


>gi|75908114|ref|YP_322410.1| carbamoyl phosphate synthase large subunit [Anabaena variabilis ATCC
            29413]
 gi|75701839|gb|ABA21515.1| carbamoyl-phosphate synthase large subunit [Anabaena variabilis ATCC
            29413]
          Length = 1097

 Score = 1532 bits (3967), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 732/1093 (66%), Positives = 897/1093 (82%), Gaps = 12/1093 (1%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            +R D++KIL+LG+GPIVIGQACEFDYSGTQACKAL+EEGYEV+L+NSNPATIMTDP  AD
Sbjct: 3    RRQDIQKILLLGSGPIVIGQACEFDYSGTQACKALREEGYEVVLVNSNPATIMTDPETAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
            RTYI P+TPELVE+V+ +ERPDALLPTMGGQTALN+AVALA++G L++Y VELIGAKL A
Sbjct: 63   RTYIEPLTPELVEKVIARERPDALLPTMGGQTALNIAVALAKNGVLDQYNVELIGAKLPA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I+KAEDR LF +AM  IGVK  PSG  ++LDE  +IA  IG +PLIIRPAFT+GGTGGGI
Sbjct: 123  IEKAEDRKLFNEAMDKIGVKVCPSGTASSLDEAKAIARRIGTYPLIIRPAFTMGGTGGGI 182

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEFE + + G+ AS  SQ+L+++SLLGWKEYELEVMRDLADNVVIICSIEN+DPMG
Sbjct: 183  AYNQEEFEEMAQVGIDASPVSQILIDQSLLGWKEYELEVMRDLADNVVIICSIENIDPMG 242

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            +HTGDSITVAPAQTLTDKEYQRLRD +I IIREIGVE GGSN+QFAVNPV+G+V+VIEMN
Sbjct: 243  IHTGDSITVAPAQTLTDKEYQRLRDMAIKIIREIGVETGGSNIQFAVNPVNGDVVVIEMN 302

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRF 447
            PRVSRSSAL+SKATGFPIAKMAAKL+VGY+LD+I NDITKKTPASFEP+IDYVVTK+PRF
Sbjct: 303  PRVSRSSALSSKATGFPIAKMAAKLAVGYTLDEIRNDITKKTPASFEPTIDYVVTKVPRF 362

Query: 448  AFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDWE 507
            AFEKFPGSEP+LTTQMKSVGEAMA+GRTF ESFQKALRSLE G +GWGC   ++L    E
Sbjct: 363  AFEKFPGSEPVLTTQMKSVGEAMAIGRTFNESFQKALRSLETGRAGWGCDKAEKLP-SGE 421

Query: 508  QLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSVS 567
            Q++  LR PNPDR+ A+  A++ GM  +EI+EL+ ID WFL + ++L++VE+FL    + 
Sbjct: 422  QIRAQLRTPNPDRIFAVRHALQLGMSPEEIYELTAIDPWFLDKMQQLLEVEKFLKRTPLK 481

Query: 568  NMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTPY 627
             +T++  Y VKR G+SD+QIAFATK+TE EVR  R  LGV P YK VDTCAAEFEA TPY
Sbjct: 482  QLTREQMYAVKRDGYSDRQIAFATKTTEDEVRAYRKELGVTPVYKTVDTCAAEFEAFTPY 541

Query: 628  MYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSNP 687
             YS+Y+ E E  P  K KV+ILGGGPNRIGQGIEFDYCCCH +++L+ AGYETIM+NSNP
Sbjct: 542  YYSTYEEETEVIPASKPKVMILGGGPNRIGQGIEFDYCCCHAAYALKGAGYETIMVNSNP 601

Query: 688  ETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDE--- 744
            ETVSTDYDTSDRLYFEPLT EDVLN+I+ E P GIIVQFGGQTPLKL+LP+ +YL +   
Sbjct: 602  ETVSTDYDTSDRLYFEPLTKEDVLNIIEAENPVGIIVQFGGQTPLKLALPLQEYLRQVGN 661

Query: 745  HRLPSASGD---GLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAI 801
              L   +G+    + +IWGTSPDSID+AEDRERF  I+++L+I QP  GIA+S  DAL +
Sbjct: 662  GSLVIGNGNEETAITKIWGTSPDSIDSAEDRERFEKILQQLNISQPPNGIARSYEDALIV 721

Query: 802  AKEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDV 861
            AK IGYPVVVRPSYVLGGRAMEIVY+D  L  Y+  AV+V+PE P+LIDK+L +AIE+DV
Sbjct: 722  AKRIGYPVVVRPSYVLGGRAMEIVYSDAELERYMTFAVQVEPEHPILIDKFLENAIEVDV 781

Query: 862  DALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVC 921
            DA+AD  G VVIGGIMEHIEQAG+HSGDSAC +P+ ++  + L+ I SWT++LA+ L+V 
Sbjct: 782  DAIADHTGRVVIGGIMEHIEQAGIHSGDSACSLPSISLPPAVLNQIRSWTVQLAQALSVV 841

Query: 922  GLMNCQYAI----TTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLG 977
            GLMN Q+A+    + S  VY+LEANPRASRTVPFVSKA G  LAK A+L+MSGK+L +L 
Sbjct: 842  GLMNIQFAVVGASSYSPQVYILEANPRASRTVPFVSKATGISLAKLASLIMSGKTLEELN 901

Query: 978  FTKEVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQK 1037
            FT+EVIP H++VKEAVLPF KF G D +LGPEMRSTGEVMGID  F  AFAKA++ AG++
Sbjct: 902  FTQEVIPSHIAVKEAVLPFNKFPGTDTILGPEMRSTGEVMGIDSDFGRAFAKAELGAGER 961

Query: 1038 LPLSGTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGR 1097
            LPL+GTVF+S++D  K     + + F+D+GFK+++T GT   L   G+ VE VLK+HEGR
Sbjct: 962  LPLTGTVFVSMSDRDKSAAVSVVREFIDLGFKVMATFGTRRVLLENGLNVELVLKLHEGR 1021

Query: 1098 PHAGDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSL 1157
            PH  D + N +IQ+++ T SG+   Q D   +RR GLAYK+P+ITT++GA A   AIRS+
Sbjct: 1022 PHVIDAIKNQKIQLIINTPSGEEA-QTDARLIRRTGLAYKIPIITTIAGAKATVAAIRSM 1080

Query: 1158 KSNTVTMTALQDF 1170
            ++ T+ +  +Q++
Sbjct: 1081 QNTTLDVKTIQEY 1093


>gi|282899734|ref|ZP_06307697.1| Carbamoyl-phosphate synthase, large subunit, glutamine-dependent
            [Cylindrospermopsis raciborskii CS-505]
 gi|281195349|gb|EFA70283.1| Carbamoyl-phosphate synthase, large subunit, glutamine-dependent
            [Cylindrospermopsis raciborskii CS-505]
          Length = 1083

 Score = 1531 bits (3963), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 730/1087 (67%), Positives = 892/1087 (82%), Gaps = 12/1087 (1%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            +R D+ KIL+LG+GPIVIGQACEFDYSGTQACKAL+EEG+EV+L+NSNPATIMTDP  AD
Sbjct: 3    RRQDIHKILLLGSGPIVIGQACEFDYSGTQACKALREEGFEVVLVNSNPATIMTDPETAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
            RTYI P+TPE+V +V+ KERPDALLPTMGGQTALN+AVALA++G LE+Y VELIGAKL A
Sbjct: 63   RTYIEPLTPEMVAKVIAKERPDALLPTMGGQTALNIAVALAKNGVLEEYNVELIGAKLPA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I+KAEDR LF  AM+ IGV   PSG  ++L+E  +IA  IG +PLIIRPAFT+GGTGGGI
Sbjct: 123  IEKAEDRKLFNDAMEKIGVNVCPSGTASSLEESKAIAQRIGSYPLIIRPAFTMGGTGGGI 182

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYNKEEFE + + G+ AS  SQ+L+++SLLGWKEYELEVMRDLADNVVIICSIEN+DPMG
Sbjct: 183  AYNKEEFELMAQVGIDASPVSQILIDQSLLGWKEYELEVMRDLADNVVIICSIENLDPMG 242

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            +HTGDSITVAPAQTLTDKEYQRLRD +I IIREIGVE GGSN+QFAVNPV+G+V+VIEMN
Sbjct: 243  IHTGDSITVAPAQTLTDKEYQRLRDMAIKIIREIGVETGGSNIQFAVNPVNGDVVVIEMN 302

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRF 447
            PRVSRSSALASKATGFPIAKMAAKL+VGY+LD+I NDITKKTPASFEP+IDYVVTKIPRF
Sbjct: 303  PRVSRSSALASKATGFPIAKMAAKLAVGYTLDEIKNDITKKTPASFEPTIDYVVTKIPRF 362

Query: 448  AFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDWE 507
            AFEKFPGS+P+LTTQMKSVGEAMA+GRTF ESFQKALRSLE G +GWG    ++L    E
Sbjct: 363  AFEKFPGSDPVLTTQMKSVGEAMAIGRTFNESFQKALRSLETGRAGWGADKAEKLP-SGE 421

Query: 508  QLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSVS 567
            Q++  LR PNP+R+ A+  AM+ G+  +EI+EL+ ID WFL +  ++++ E+FL    + 
Sbjct: 422  QVRAQLRTPNPERIFALRHAMQLGLSNEEIYELTAIDPWFLDKLHQILETEKFLKRTPLQ 481

Query: 568  NMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTPY 627
             +TK   YEVKR GFSD+QIAF TK+ E EVR  R  LGVIP YK VDTCAAEFEA TPY
Sbjct: 482  QLTKVQMYEVKRNGFSDRQIAFCTKTKEDEVRAYRKQLGVIPVYKTVDTCAAEFEAFTPY 541

Query: 628  MYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSNP 687
             YS+Y+ E E  PT K KV+ILGGGPNRIGQGIEFDYCCCH +++L+SA YETIM+NSNP
Sbjct: 542  YYSTYEEETEILPTDKPKVMILGGGPNRIGQGIEFDYCCCHAAYALKSANYETIMVNSNP 601

Query: 688  ETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHRL 747
            ETVSTDYDTSDRLYFEPLT EDVLN+I+ E P GIIVQFGGQTPLKL++P+ +YL   + 
Sbjct: 602  ETVSTDYDTSDRLYFEPLTKEDVLNIIEAENPVGIIVQFGGQTPLKLAVPLQEYL--QKS 659

Query: 748  PSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEIGY 807
            PS+    + RIWGTSPDSID AE+RERF  I++EL I QP  GIA+S  DAL +AK IGY
Sbjct: 660  PSS----VTRIWGTSPDSIDMAENRERFEKILQELKIAQPANGIARSYEDALIVAKRIGY 715

Query: 808  PVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALADS 867
            PVVVRPSYVLGGRAMEIVY+D  L  Y+  AV+V+PE P+LIDK+L +AIE+DVDA+AD 
Sbjct: 716  PVVVRPSYVLGGRAMEIVYSDSELERYMSFAVQVEPEHPILIDKFLENAIEVDVDAIADH 775

Query: 868  CGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNCQ 927
             G VVIGGIMEHIEQAG+HSGDSAC +P+ ++S + L+ I +WT++LAK L+V GLMN Q
Sbjct: 776  QGRVVIGGIMEHIEQAGIHSGDSACSLPSISLSPAVLNQIRTWTVELAKALSVVGLMNIQ 835

Query: 928  YAI----TTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVI 983
            +A+    + S  VY+LEANPRASRTVPFVSKA G PLA+ A+L+MSGK+L +L FT+EVI
Sbjct: 836  FAVVGASSYSPQVYILEANPRASRTVPFVSKATGVPLARLASLIMSGKTLEELNFTQEVI 895

Query: 984  PKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGT 1043
            P+H++VKEAVLPF KF G D LLGPEMRSTGEVMGID+ F  AFAKA++ AG+KLPL GT
Sbjct: 896  PQHIAVKEAVLPFNKFPGTDTLLGPEMRSTGEVMGIDVDFGRAFAKAEMGAGEKLPLQGT 955

Query: 1044 VFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDM 1103
            VF+S++D  K  +  + K F+ +GFK+++T GT+ FL  +G+ +E +LK+HEGRPH  D 
Sbjct: 956  VFVSMSDRDKSLVVEVIKEFIQLGFKVIATQGTSEFLREQGLQIETILKLHEGRPHVLDA 1015

Query: 1104 VANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTVT 1163
            + N QIQ+++ T SG    + DG  +RR  L YK+P++TT++GA A   AIRSL++ ++ 
Sbjct: 1016 IKNRQIQLIINTPSGQEA-RTDGQLIRRTALGYKIPIVTTIAGAKATVAAIRSLQNISLD 1074

Query: 1164 MTALQDF 1170
            +  +Q++
Sbjct: 1075 VKTIQEY 1081


>gi|67921146|ref|ZP_00514665.1| Carbamoyl-phosphate synthase, large subunit, glutamine-dependent
            [Crocosphaera watsonii WH 8501]
 gi|67857263|gb|EAM52503.1| Carbamoyl-phosphate synthase, large subunit, glutamine-dependent
            [Crocosphaera watsonii WH 8501]
          Length = 1081

 Score = 1530 bits (3961), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 741/1086 (68%), Positives = 888/1086 (81%), Gaps = 10/1086 (0%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            +R DL+KILILGAGPIVIGQACEFDYSGTQACKAL+EEGYEV+L+NSNPA+IMTDPG+A+
Sbjct: 3    RREDLKKILILGAGPIVIGQACEFDYSGTQACKALREEGYEVVLVNSNPASIMTDPGMAN 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
            RTYI P+TP++VE+V+ KERPDALLPTMGGQTALN+AVALA++G L+KY VELIGAKL A
Sbjct: 63   RTYIEPLTPDMVEKVIAKERPDALLPTMGGQTALNVAVALAKNGVLDKYNVELIGAKLPA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            IKKAEDRDLFK+AM  IGV   PSGI +TL E  +I  EIG +PLIIRPAFTLGGTGGGI
Sbjct: 123  IKKAEDRDLFKEAMNKIGVPVCPSGIASTLKEAKAIGEEIGSYPLIIRPAFTLGGTGGGI 182

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEFE + + G+ AS  SQ+LVEKSLLGWKEYELEVMRDLADNVVIICSIEN DPMG
Sbjct: 183  AYNQEEFEEMAQFGIDASPVSQILVEKSLLGWKEYELEVMRDLADNVVIICSIENFDPMG 242

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQRLRDYS AIIREIGVE GGSN+QF+VNP++G+V+VIEMN
Sbjct: 243  VHTGDSITVAPAQTLTDKEYQRLRDYSQAIIREIGVETGGSNIQFSVNPLNGDVIVIEMN 302

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRF 447
            PRVSRSSALASKATGFPIAK AAKL+VGY+L++I NDITK+TPASFEP+IDYVVTKIPRF
Sbjct: 303  PRVSRSSALASKATGFPIAKFAAKLAVGYTLNEINNDITKQTPASFEPTIDYVVTKIPRF 362

Query: 448  AFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDWE 507
            AFEKFPGS+ +LTTQMKSVGEAMA+GRTFQESFQKALRSLE G  G+GC   + L     
Sbjct: 363  AFEKFPGSQAILTTQMKSVGEAMAIGRTFQESFQKALRSLETGRYGFGCDRTETLP-SLS 421

Query: 508  QLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSVS 567
            Q++ +LR PNP+R+ +IY AM+ GM  +EIHEL+ ID WFL + +++I+ E+ L   +++
Sbjct: 422  QVRSNLRTPNPERVYSIYHAMRLGMTPEEIHELTAIDIWFLDKLQDIIETEKVLKQTNLN 481

Query: 568  NMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTPY 627
            ++T  D   +K++GFSD+QIAFATK+TE EVR  R  LG+IP YK VDTCAAEFEA TPY
Sbjct: 482  DITASDLRAIKQKGFSDRQIAFATKTTEDEVRNYRKGLGIIPVYKVVDTCAAEFEAYTPY 541

Query: 628  MYSSYD-FECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSN 686
             YS+Y+  E E   T+KKKV+ILGGGPNRIGQGIEFDYCCCH SFSL  AG+ETIM+NSN
Sbjct: 542  YYSTYEPEETEVTVTEKKKVMILGGGPNRIGQGIEFDYCCCHASFSLSDAGFETIMVNSN 601

Query: 687  PETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHR 746
            PETVSTDYDTSDRLYFEPLT EDVLN+I+ E P G+I+QFGGQTPLKL++P+  YLD   
Sbjct: 602  PETVSTDYDTSDRLYFEPLTKEDVLNIIETENPVGVIIQFGGQTPLKLAVPLQTYLDSPE 661

Query: 747  LPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEIG 806
             P  +     +IWGTSPDSID AEDRERF  I+ +L+I+QP  GIA+S  ++  ++  IG
Sbjct: 662  CPVQT-----KIWGTSPDSIDTAEDRERFEKILNDLNIKQPPNGIARSYEESAVVSSRIG 716

Query: 807  YPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALAD 866
            YPVVVRPSYVLGGRAMEIVY+DE L  Y+  AV+V+P+ P+LIDK+L +AIE+DVDAL D
Sbjct: 717  YPVVVRPSYVLGGRAMEIVYSDEELERYMTYAVQVEPDHPILIDKFLQNAIEVDVDALCD 776

Query: 867  SCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNC 926
            + G VVIGGIMEHIEQAGVHSGDSAC +P  T+SS+ ++TI +WT +LA  L V GLMN 
Sbjct: 777  ATGKVVIGGIMEHIEQAGVHSGDSACSVPFTTLSSNAIETIRTWTTQLANSLKVVGLMNI 836

Query: 927  QYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPKH 986
            QYA+     VY+LEANPRASRTVP+VSKA G PLAK A+LVMSGK+L +LG T+E +P+H
Sbjct: 837  QYAVQGE-QVYILEANPRASRTVPYVSKATGRPLAKIASLVMSGKTLEELGITEEFVPRH 895

Query: 987  VSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVFL 1046
            ++VKEAVLPF+KF G D LLGPEMRSTGEVMGID  F  AFAKA+IAAG  L   GTVF+
Sbjct: 896  IAVKEAVLPFQKFPGADTLLGPEMRSTGEVMGIDEDFGKAFAKAEIAAGVDLATEGTVFV 955

Query: 1047 SLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGI-AVERVLKMHEGRPHAGDMVA 1105
            S++D  K     + K  +D+GFK+V+TSGT   LE  GI  VE VLK+HEGRPH  D + 
Sbjct: 956  SMSDRDKISTVPVVKDLVDLGFKVVATSGTQKVLEENGIEGVEVVLKLHEGRPHVIDWIK 1015

Query: 1106 NGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTVTMT 1165
            N QIQ ++ T SG+     DG ++RR  L YK+P+ITT++GA A   AIRSL++  + + 
Sbjct: 1016 NKQIQFIINTPSGED-SHADGRRIRRTALDYKLPIITTIAGAKATVAAIRSLQTEPLEVK 1074

Query: 1166 ALQDFF 1171
            ALQD+ 
Sbjct: 1075 ALQDYI 1080


>gi|126658369|ref|ZP_01729518.1| carbamoyl-phosphate synthase large subunit [Cyanothece sp. CCY0110]
 gi|126620301|gb|EAZ91021.1| carbamoyl-phosphate synthase large subunit [Cyanothece sp. CCY0110]
          Length = 1081

 Score = 1530 bits (3961), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 744/1086 (68%), Positives = 883/1086 (81%), Gaps = 10/1086 (0%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            +R DL+KILILGAGPIVIGQACEFDYSGTQACKAL+EEGYEV+L+NSNPA+IMTDP +A+
Sbjct: 3    RRDDLKKILILGAGPIVIGQACEFDYSGTQACKALREEGYEVVLVNSNPASIMTDPEMAN 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
            RTYI P+TP++VE+V+ KERPDALLPTMGGQTALN+AV+LA+SG L+KY VELIGAKL A
Sbjct: 63   RTYIEPLTPDMVEKVIAKERPDALLPTMGGQTALNVAVSLAKSGVLDKYNVELIGAKLPA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I+ AEDR+LFK AM  IGV   PSGI +TL+E   I  EIG +PLIIRPAFTLGGTGGGI
Sbjct: 123  IEMAEDRELFKDAMAKIGVPVCPSGIASTLEEAQVIGKEIGSYPLIIRPAFTLGGTGGGI 182

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEFE + + G+ AS  SQ+LVEKSLLGWKEYELEVMRDLADNVVIICSIEN DPMG
Sbjct: 183  AYNQEEFEEMAQFGIDASPVSQILVEKSLLGWKEYELEVMRDLADNVVIICSIENFDPMG 242

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQRLRDYS AIIREIGVE GGSN+QF+VNP +GEV+VIEMN
Sbjct: 243  VHTGDSITVAPAQTLTDKEYQRLRDYSQAIIREIGVETGGSNIQFSVNPTNGEVIVIEMN 302

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRF 447
            PRVSRSSALASKATGFPIAK AAKL+VGY+L++I NDITK+TPASFEP+IDYVVTKIPRF
Sbjct: 303  PRVSRSSALASKATGFPIAKFAAKLAVGYTLNEINNDITKQTPASFEPTIDYVVTKIPRF 362

Query: 448  AFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDWE 507
            AFEKFPGS+ +LTTQMKSVGEAMA+GRTFQESFQKALRSLE G  G+GC   + L     
Sbjct: 363  AFEKFPGSQAILTTQMKSVGEAMAIGRTFQESFQKALRSLETGRYGFGCDKQETLP-SLS 421

Query: 508  QLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSVS 567
            Q++ SLR PNPDR+ +IY AM+ GM  +E+HEL+ ID WFL + ++LID E+ L    + 
Sbjct: 422  QVRSSLRTPNPDRVYSIYHAMRLGMTAEEVHELTAIDIWFLDKLEDLIDTEKVLKQTKLK 481

Query: 568  NMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTPY 627
            ++   D   +K++GFSD+QIAFATK+TE EVR  R SLG+IP YK VDTCAAEFEA TPY
Sbjct: 482  DIDASDMRVIKQKGFSDRQIAFATKTTEDEVRNYRKSLGIIPVYKVVDTCAAEFEAYTPY 541

Query: 628  MYSSYD-FECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSN 686
             YS+Y+  E E   T KKKV+ILGGGPNRIGQGIEFDYCCCH SFSL  AG+ETIM+NSN
Sbjct: 542  YYSTYEPSETEVTVTDKKKVMILGGGPNRIGQGIEFDYCCCHASFSLSEAGFETIMVNSN 601

Query: 687  PETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHR 746
            PETVSTDYDTSDRLYFEPLT EDVLN+I+ E P G+I+QFGGQTPLKL++P+  YLD   
Sbjct: 602  PETVSTDYDTSDRLYFEPLTKEDVLNIIETENPVGVIIQFGGQTPLKLAVPLQTYLDSSE 661

Query: 747  LPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEIG 806
             P  +     +IWGTSPDSID AEDRERF  I+ +L I+QP  GI++S  ++L ++  IG
Sbjct: 662  CPVQT-----KIWGTSPDSIDTAEDRERFEKILHDLDIKQPPNGISRSYEESLRVSSRIG 716

Query: 807  YPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALAD 866
            YPVVVRPSYVLGGRAMEIVY+DE L  Y+  AV+V+P+ P+LIDK+L +AIE+DVDAL D
Sbjct: 717  YPVVVRPSYVLGGRAMEIVYSDEELERYMTYAVQVEPDHPILIDKFLENAIEVDVDALCD 776

Query: 867  SCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNC 926
            + G VVIGGIMEHIEQAGVHSGDSAC +P  T+S+S ++TI +WT  LA  L V GLMN 
Sbjct: 777  TTGKVVIGGIMEHIEQAGVHSGDSACSVPFTTLSNSVIETIRTWTAALANSLKVVGLMNI 836

Query: 927  QYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPKH 986
            QYA+     VY+LEANPRASRTVP+VSKA G PLAK A+LVMSGK+L +LG T+E +P+H
Sbjct: 837  QYAVQGE-QVYILEANPRASRTVPYVSKATGRPLAKIASLVMSGKTLEELGITEEFVPRH 895

Query: 987  VSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVFL 1046
            ++VKEAVLPF+KF G D LLGPEMRSTGEVMGID  F  AFAKA+IAAG  L  SGTVF+
Sbjct: 896  IAVKEAVLPFQKFPGADTLLGPEMRSTGEVMGIDEDFGKAFAKAEIAAGVDLATSGTVFV 955

Query: 1047 SLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGI-AVERVLKMHEGRPHAGDMVA 1105
            S++D  K     + K  LD+GFK+V+TSGT   LE  GI  ++ VLK+HEGRPH  D + 
Sbjct: 956  SMSDRDKVLTVPVVKDLLDLGFKVVATSGTQKVLEENGIEGIDVVLKLHEGRPHVIDWIK 1015

Query: 1106 NGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTVTMT 1165
            N QIQ ++ T SG+   QIDG K+RR  L YK+P+ITT++GA A   AIRSL++  + + 
Sbjct: 1016 NKQIQFIINTPSGED-SQIDGRKIRRTALDYKLPIITTIAGAKATVAAIRSLQTEPLEVK 1074

Query: 1166 ALQDFF 1171
            ALQD+ 
Sbjct: 1075 ALQDYI 1080


>gi|172036953|ref|YP_001803454.1| carbamoyl phosphate synthase large subunit [Cyanothece sp. ATCC
            51142]
 gi|354554753|ref|ZP_08974057.1| carbamoyl-phosphate synthase, large subunit [Cyanothece sp. ATCC
            51472]
 gi|171698407|gb|ACB51388.1| carbamoyl-phosphate synthase, large subunit [Cyanothece sp. ATCC
            51142]
 gi|353553562|gb|EHC22954.1| carbamoyl-phosphate synthase, large subunit [Cyanothece sp. ATCC
            51472]
          Length = 1081

 Score = 1529 bits (3959), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 746/1086 (68%), Positives = 883/1086 (81%), Gaps = 10/1086 (0%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            +R DL+KILILGAGPIVIGQACEFDYSGTQACKAL+EEGYEV+L+NSNPA+IMTDP +A+
Sbjct: 3    RRDDLKKILILGAGPIVIGQACEFDYSGTQACKALREEGYEVVLVNSNPASIMTDPEMAN 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
            RTYI P+TP++VE+V+ KERP+ALLPTMGGQTALN+AVALA++G L+KY VELIGAKL A
Sbjct: 63   RTYIEPLTPDMVEKVIAKERPNALLPTMGGQTALNVAVALAKNGVLDKYNVELIGAKLPA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I+ AEDR+LFK AM  IGV   PSGI +TL E  +I  EIG +PLIIRPAFTLGGTGGGI
Sbjct: 123  IEMAEDRELFKDAMAKIGVPVCPSGIASTLKEAKAIGEEIGSYPLIIRPAFTLGGTGGGI 182

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEFE + + G+ AS  SQ+LVEKSLLGWKEYELEVMRDLADNVVIICSIEN DPMG
Sbjct: 183  AYNQEEFEEMAQFGIDASPVSQILVEKSLLGWKEYELEVMRDLADNVVIICSIENFDPMG 242

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQRLRDYS AIIREIGVE GGSN+QF+VNP +GEV+VIEMN
Sbjct: 243  VHTGDSITVAPAQTLTDKEYQRLRDYSQAIIREIGVETGGSNIQFSVNPTNGEVIVIEMN 302

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRF 447
            PRVSRSSALASKATGFPIAK AAKL+VGY+L++I NDITK+TPASFEP+IDYVVTKIPRF
Sbjct: 303  PRVSRSSALASKATGFPIAKFAAKLAVGYTLNEISNDITKQTPASFEPTIDYVVTKIPRF 362

Query: 448  AFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDWE 507
            AFEKFPGS+ +LTTQMKSVGEAMA+GRTFQESFQKALRSLE G  G+GC   + L     
Sbjct: 363  AFEKFPGSQAILTTQMKSVGEAMAIGRTFQESFQKALRSLETGRYGFGCDKQETLP-SLS 421

Query: 508  QLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSVS 567
            Q++ SLR PNPDR+ +IY AMK GM  +EI+EL+ ID WFL +  +LID E+ L    + 
Sbjct: 422  QVRSSLRTPNPDRVYSIYHAMKLGMTPEEIYELTAIDIWFLDKLADLIDTEKVLKQTKLK 481

Query: 568  NMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTPY 627
            ++   D   +K++GFSD+QIAFATK+TE EVR  R SLG+IP YK VDTCAAEFEA TPY
Sbjct: 482  DIDASDMRVIKQKGFSDRQIAFATKTTEDEVRNYRKSLGIIPVYKVVDTCAAEFEAYTPY 541

Query: 628  MYSSYD-FECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSN 686
             YS+Y+  E E   T KKKV+ILGGGPNRIGQGIEFDYCCCH SFSL  AG+ETIM+NSN
Sbjct: 542  YYSTYEPEETEVTVTDKKKVMILGGGPNRIGQGIEFDYCCCHASFSLSEAGFETIMVNSN 601

Query: 687  PETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHR 746
            PETVSTDYDTSDRLYFEPLT EDVLN+I+ E P G+I+QFGGQTPLKL++P+  YLD  +
Sbjct: 602  PETVSTDYDTSDRLYFEPLTKEDVLNIIETENPVGVIIQFGGQTPLKLAVPLQTYLDSPQ 661

Query: 747  LPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEIG 806
             P  +     +IWGTSPDSID AEDRERF  I+  L I+QP  GI++S  ++LA++  IG
Sbjct: 662  CPVQT-----KIWGTSPDSIDTAEDRERFEKILHNLDIKQPPNGISRSYEESLAVSSRIG 716

Query: 807  YPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALAD 866
            YPVVVRPSYVLGGRAMEIVY+DE L  Y+  AV+V+P+ P+LIDK+L +AIE+DVDAL D
Sbjct: 717  YPVVVRPSYVLGGRAMEIVYSDEELERYMTYAVQVEPDHPILIDKFLENAIEVDVDALCD 776

Query: 867  SCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNC 926
            + G VVIGGIMEHIEQAGVHSGDSAC +P  T+S S ++TI +WT+ LA  L V GLMN 
Sbjct: 777  TTGKVVIGGIMEHIEQAGVHSGDSACSVPYTTLSKSVIETIRTWTVALANSLKVVGLMNI 836

Query: 927  QYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPKH 986
            QYA+     VY+LEANPRASRTVP+VSKA G PLAK A+LVMSGK+L +LG T+E +P+H
Sbjct: 837  QYAVQGE-QVYILEANPRASRTVPYVSKATGRPLAKIASLVMSGKTLEELGITEEFVPRH 895

Query: 987  VSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVFL 1046
            ++VKEAVLPF+KF G D LLGPEMRSTGEVMGID  F  AFAKA+IAAG  L  SGTVF+
Sbjct: 896  IAVKEAVLPFQKFPGADTLLGPEMRSTGEVMGIDEDFGKAFAKAEIAAGVDLATSGTVFV 955

Query: 1047 SLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGI-AVERVLKMHEGRPHAGDMVA 1105
            S++D  K     + K  LD+GFK+V+TSGT   LE  GI  +E VLK+HEGRPH  D + 
Sbjct: 956  SMSDRDKVLTVPVVKDLLDLGFKVVATSGTQKVLEENGIEGIEVVLKLHEGRPHVIDWIK 1015

Query: 1106 NGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTVTMT 1165
            N QIQ ++ T SG+   QIDG K+RR  L YK+P+ITT++GA A   AIRSL++  + + 
Sbjct: 1016 NKQIQFIINTPSGED-SQIDGRKIRRTALDYKLPIITTIAGAKATVAAIRSLQTEPLEVK 1074

Query: 1166 ALQDFF 1171
            ALQD+ 
Sbjct: 1075 ALQDYI 1080


>gi|17231301|ref|NP_487849.1| carbamoyl phosphate synthase large subunit [Nostoc sp. PCC 7120]
 gi|22095512|sp|Q8YQL2.1|CARB_ANASP RecName: Full=Carbamoyl-phosphate synthase large chain; AltName:
            Full=Carbamoyl-phosphate synthetase ammonia chain
 gi|17132943|dbj|BAB75508.1| carbamoyl phosphate synthetase large chain [Nostoc sp. PCC 7120]
          Length = 1104

 Score = 1529 bits (3959), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 733/1100 (66%), Positives = 897/1100 (81%), Gaps = 19/1100 (1%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            +R D++KIL+LG+GPIVIGQACEFDYSGTQACKAL+EEGYEV+L+NSNPATIMTDP  AD
Sbjct: 3    RRQDIQKILLLGSGPIVIGQACEFDYSGTQACKALREEGYEVVLVNSNPATIMTDPETAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
            RTYI P+TPELVE+V+ +ERPDALLPTMGGQTALN+AVALA++G L++Y VELIGAKL A
Sbjct: 63   RTYIEPLTPELVEKVIARERPDALLPTMGGQTALNIAVALAKNGVLDQYNVELIGAKLPA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I+KAEDR LF +AM  IGVK  PSG  ++LDE  +IA  IG +PLIIRPAFT+GGTGGGI
Sbjct: 123  IEKAEDRKLFNEAMDKIGVKVCPSGTASSLDESKAIARRIGTYPLIIRPAFTMGGTGGGI 182

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEFE + + G+ AS  SQ+L+++SLLGWKEYELEVMRDLADNVVIICSIEN+DPMG
Sbjct: 183  AYNQEEFEEMAQVGIDASPVSQILIDQSLLGWKEYELEVMRDLADNVVIICSIENIDPMG 242

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            +HTGDSITVAPAQTLTDKEYQRLRD +I IIREIGVE GGSN+QFAVNPV+G+V+VIEMN
Sbjct: 243  IHTGDSITVAPAQTLTDKEYQRLRDMAIKIIREIGVETGGSNIQFAVNPVNGDVVVIEMN 302

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRF 447
            PRVSRSSAL+SKATGFPIAKMAAKL+VGY+LD+I NDITKKTPASFEP+IDYVVTK+PRF
Sbjct: 303  PRVSRSSALSSKATGFPIAKMAAKLAVGYTLDEIRNDITKKTPASFEPTIDYVVTKVPRF 362

Query: 448  AFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDWE 507
            AFEKFPGSEP+LTTQMKSVGEAMA+GRTF ESFQKALRSLE G +GWGC   ++L    E
Sbjct: 363  AFEKFPGSEPVLTTQMKSVGEAMAIGRTFNESFQKALRSLETGRAGWGCDKAEKLP-SGE 421

Query: 508  QLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSVS 567
            Q++  LR PNPDR+ A+  A++ GM  +EI+EL+ ID WFL + ++L++VE+FL    + 
Sbjct: 422  QIRAQLRTPNPDRIFAVRHALQLGMSPEEIYELTAIDPWFLDKMQQLLEVEKFLKRTPLK 481

Query: 568  NMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTPY 627
             +T++  Y VKR G+SD+QIAFATK+TE EVR  R  LGV P YK VDTCAAEFEA TPY
Sbjct: 482  QLTREQMYAVKRDGYSDRQIAFATKTTEDEVRAYRKELGVTPVYKTVDTCAAEFEAFTPY 541

Query: 628  MYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSNP 687
             YS+Y+ E E  P  K KV+ILGGGPNRIGQGIEFDYCCCH +++L+ AGYETIM+NSNP
Sbjct: 542  YYSTYEEETEVIPASKPKVMILGGGPNRIGQGIEFDYCCCHAAYALKGAGYETIMVNSNP 601

Query: 688  ETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHRL 747
            ETVSTDYDTSDRLYFEPLT EDVLN+I+ E P GIIVQFGGQTPLKL+LP+  YL +   
Sbjct: 602  ETVSTDYDTSDRLYFEPLTKEDVLNIIEAENPVGIIVQFGGQTPLKLALPLQDYLRQVGN 661

Query: 748  PS-ASGDG------------LVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKS 794
             S   G+G            + +IWGTSPDSID+AEDRERF  I+++L+I QP  GIA+S
Sbjct: 662  GSLVIGNGNEETAITDDQLPITKIWGTSPDSIDSAEDRERFEKILQKLNISQPPNGIARS 721

Query: 795  EADALAIAKEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLS 854
              DAL +AK IGYPVVVRPSYVLGGRAMEIVY+D  L  Y+  AV+V+PE P+LIDK+L 
Sbjct: 722  YEDALIVAKRIGYPVVVRPSYVLGGRAMEIVYSDTELERYMTFAVQVEPEHPILIDKFLE 781

Query: 855  DAIEIDVDALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKL 914
            +AIE+DVDA+AD  G VVIGGIMEHIEQAG+HSGDSAC +P+ ++  + L+ I +WT++L
Sbjct: 782  NAIEVDVDAIADHTGRVVIGGIMEHIEQAGIHSGDSACSLPSISLPPAVLNQIRTWTVQL 841

Query: 915  AKRLNVCGLMNCQYAI----TTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSG 970
            A+ L+V GLMN Q+A+    + S  VY+LEANPRASRTVPFVSKA G PLAK A+L+MSG
Sbjct: 842  AQELSVVGLMNIQFAVIGASSYSPQVYILEANPRASRTVPFVSKATGVPLAKLASLIMSG 901

Query: 971  KSLNDLGFTKEVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKA 1030
            K+L +L FT+EVIP H++VKEAVLPF KF G D +LGPEMRSTGEVMGID  F  AFAKA
Sbjct: 902  KTLEELNFTQEVIPSHIAVKEAVLPFNKFPGTDTILGPEMRSTGEVMGIDSDFGRAFAKA 961

Query: 1031 QIAAGQKLPLSGTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERV 1090
            ++ AG++LPL+GTVF+S++D  K     + + F+D+GFK+++T GT   L   G+ VE V
Sbjct: 962  ELGAGERLPLTGTVFVSMSDRDKSAAVPVVREFIDLGFKVMATFGTRRVLLENGLNVELV 1021

Query: 1091 LKMHEGRPHAGDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALAN 1150
            LK+HEGRPH  D + N +IQ+++ T SG+   Q D   +RR GLAYK+P+ITT++GA A 
Sbjct: 1022 LKLHEGRPHVIDAIKNQKIQLIINTPSGEEA-QTDARLIRRTGLAYKIPIITTIAGAKAT 1080

Query: 1151 AEAIRSLKSNTVTMTALQDF 1170
              AIRS+++ T+ +  +Q++
Sbjct: 1081 VAAIRSMQNTTLDVKTIQEY 1100


>gi|145349915|ref|XP_001419372.1| Carbamoyl-phosphate synthase L chain [Ostreococcus lucimarinus
            CCE9901]
 gi|144579603|gb|ABO97665.1| Carbamoyl-phosphate synthase L chain [Ostreococcus lucimarinus
            CCE9901]
          Length = 1105

 Score = 1529 bits (3958), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 743/1087 (68%), Positives = 877/1087 (80%), Gaps = 3/1087 (0%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTDL+KI+ILGAGPIVIGQACEFDYSGTQACKAL+ EGYEV+L+NSNPATIMTDP  A 
Sbjct: 19   KRTDLKKIMILGAGPIVIGQACEFDYSGTQACKALRAEGYEVVLVNSNPATIMTDPETAS 78

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
            RTY+TPM+PE VEQ++ +E+PDALLPTMGGQTALNL  ALAESG L KY VELIGAKLDA
Sbjct: 79   RTYVTPMSPESVEQIIAREKPDALLPTMGGQTALNLTKALAESGILAKYNVELIGAKLDA 138

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR LFK AM  IG+ TP SG   T  +  +IA +IG  PLIIRPAFTLGG+GGGI
Sbjct: 139  INKAEDRQLFKDAMDKIGLNTPKSGTAETWAQAQTIAADIGTMPLIIRPAFTLGGSGGGI 198

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN  EFE I K GL AS TSQVL+E+SLLGWKEYELEVMRDLADNVVI+CSIEN DPMG
Sbjct: 199  AYNMAEFENIVKGGLDASATSQVLIEQSLLGWKEYELEVMRDLADNVVIVCSIENFDPMG 258

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPA+TLTDKEYQRLRD S+AIIREIGVECGGSNVQ AVNPVDG+VM+IEMN
Sbjct: 259  VHTGDSITVAPAETLTDKEYQRLRDASVAIIREIGVECGGSNVQMAVNPVDGQVMIIEMN 318

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRF 447
            PRVSRSSALASKATGFPIAKMAAKL+VG +LD IPNDIT KTPASFEPSIDYV+TKIPRF
Sbjct: 319  PRVSRSSALASKATGFPIAKMAAKLAVGCTLDGIPNDITLKTPASFEPSIDYVITKIPRF 378

Query: 448  AFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKE-LDWDW 506
            AFEKFPG++ +LTTQMKSVGEAMA+GRT+QESFQKA RSLE GFSGWG S     +  D 
Sbjct: 379  AFEKFPGAKAVLTTQMKSVGEAMAMGRTWQESFQKAFRSLETGFSGWGLSKKDGFMQGDV 438

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLT-QS 565
              ++  L +PNP+R+  I+ A   G    EI  L+ +D WF+ Q  EL + E +L + +S
Sbjct: 439  SAIRDGLTIPNPERIVTIHEAFLAGFTEKEIINLTTMDPWFVRQLGELYETECWLKSLKS 498

Query: 566  VSNMTKDDFYEVKRRGFSDKQIAFATKST-EKEVREKRLSLGVIPSYKRVDTCAAEFEAN 624
            +  ++++D+ EVKRRGFSD QI+ A   T E  +R+ R   G +PS KRVDTCAAEF+A+
Sbjct: 499  IDELSENDWLEVKRRGFSDAQISVAFPGTDEMTIRKARTGKGCVPSMKRVDTCAAEFQAD 558

Query: 625  TPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMN 684
            TPYMYSSYD   E+ PT  +K+LILGGGPNRIGQGIEFDYCCCH +F+L  AG+ETIM+N
Sbjct: 559  TPYMYSSYDGNDEAEPTNNRKILILGGGPNRIGQGIEFDYCCCHAAFALADAGFETIMLN 618

Query: 685  SNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDE 744
            SNPETVSTDYDTSDRLYFEPLTVEDVLNV + ERPEGIIVQFGGQTPL L+  +   L+ 
Sbjct: 619  SNPETVSTDYDTSDRLYFEPLTVEDVLNVCETERPEGIIVQFGGQTPLSLATKLEAALNA 678

Query: 745  HRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKE 804
            + +P+ASG+G  +I GT PDSIDAAEDRER+  I+ EL I QP GG+A+SE +AL +A++
Sbjct: 679  NPIPAASGNGFTKILGTPPDSIDAAEDRERWIDILDELEILQPPGGVARSEEEALKVAEK 738

Query: 805  IGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDAL 864
            +GYPV+VRPSYVLGGRAMEIV +   L  Y+  AVEVDPERPVL+DKYL +A EID DAL
Sbjct: 739  LGYPVMVRPSYVLGGRAMEIVGSTADLKRYINTAVEVDPERPVLVDKYLQNATEIDCDAL 798

Query: 865  ADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLM 924
             D  GNVVIGGIMEHIEQAGVHSGDSAC +PT+TI  S L TI  WT KLA+RL V GL+
Sbjct: 799  CDMEGNVVIGGIMEHIEQAGVHSGDSACSLPTQTIPESALATIREWTPKLARRLGVVGLI 858

Query: 925  NCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIP 984
            N QYA+T  G  Y++EANPRASRTVPFV+KAIGHPLAKYA+LVM+GK+L ++GFT+EV  
Sbjct: 859  NIQYAVTPDGTPYIIEANPRASRTVPFVAKAIGHPLAKYASLVMAGKTLKEIGFTEEVKL 918

Query: 985  KHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTV 1044
             HV+VKEAVLPF+KF G D LLGPEMRSTGEVMGID  F  A+ KAQ+AAGQ+LP SG V
Sbjct: 919  NHVAVKEAVLPFDKFPGADTLLGPEMRSTGEVMGIDKDFSRAYCKAQLAAGQRLPTSGNV 978

Query: 1045 FLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMV 1104
            F+S+ D  K  +  IA+  + + + ++ST GTA  LE  G+ V +V K+HEGRPH GDM+
Sbjct: 979  FISVRDGDKDAIVDIARDLVAMKYTVLSTGGTASHLENAGVPVTKVKKVHEGRPHIGDMI 1038

Query: 1105 ANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTVTM 1164
             NG+I +MV+TSSGD+ D +DG ++RR  +  KVP++TT++GA A   A+R L+ N + M
Sbjct: 1039 RNGEIGLMVVTSSGDAQDLVDGREIRRTAVGLKVPMVTTIAGAKATVGAVRVLQQNDLVM 1098

Query: 1165 TALQDFF 1171
             ALQDFF
Sbjct: 1099 DALQDFF 1105


>gi|427717249|ref|YP_007065243.1| carbamoyl-phosphate synthase large subunit [Calothrix sp. PCC 7507]
 gi|427349685|gb|AFY32409.1| carbamoyl-phosphate synthase large subunit [Calothrix sp. PCC 7507]
          Length = 1098

 Score = 1527 bits (3954), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 731/1097 (66%), Positives = 894/1097 (81%), Gaps = 14/1097 (1%)

Query: 86   LGKRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGL 145
            + +R DLRKIL+LG+GPIVIGQACEFDYSGTQACKAL+EEGYEV+L+NSNPATIMTDP  
Sbjct: 1    MPRRQDLRKILLLGSGPIVIGQACEFDYSGTQACKALREEGYEVVLVNSNPATIMTDPET 60

Query: 146  ADRTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKL 205
            ADRTYI P+TPELVE+V+EKERPDALLPTMGGQTALNLAVALA++G L+KY VELIGAKL
Sbjct: 61   ADRTYIEPLTPELVEKVIEKERPDALLPTMGGQTALNLAVALAKNGVLDKYNVELIGAKL 120

Query: 206  DAIKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGG 265
             AI+KAEDR LF +AM  IGV   PSG  +TL+E  +IA +IG +PLIIRPAFT+GGTGG
Sbjct: 121  PAIEKAEDRKLFNEAMAKIGVAVCPSGTASTLEESKAIARQIGSYPLIIRPAFTMGGTGG 180

Query: 266  GIAYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDP 325
            GIAYN+EEFE + + G+ AS  SQ+L+++SLLGWKEYELEVMRDLADNVVIICSIEN+DP
Sbjct: 181  GIAYNQEEFEEMAQVGIDASPVSQILIDQSLLGWKEYELEVMRDLADNVVIICSIENLDP 240

Query: 326  MGVHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIE 385
            MG+HTGDSITVAPAQTLTDKEYQRLRD +I IIREIGVE GGSN+QFAVNPV+G+V+VIE
Sbjct: 241  MGIHTGDSITVAPAQTLTDKEYQRLRDMAIKIIREIGVETGGSNIQFAVNPVNGDVVVIE 300

Query: 386  MNPRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIP 445
            MNPRVSRSSAL+SKATGFPIAKMAAKL+VGY+LD+I NDITKKTPASFEP+IDYVVTKIP
Sbjct: 301  MNPRVSRSSALSSKATGFPIAKMAAKLAVGYTLDEIKNDITKKTPASFEPTIDYVVTKIP 360

Query: 446  RFAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWD 505
            RFAFEKFPG++P+LTTQMKSVGEAMA+GRTF ESFQKALRSLE G +GWGC   ++L   
Sbjct: 361  RFAFEKFPGADPVLTTQMKSVGEAMAIGRTFNESFQKALRSLETGRAGWGCDKAEKLP-S 419

Query: 506  WEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQS 565
             EQ++  LR PNPDR+ A+  A++ G+  +EI+EL+ ID WFL + ++L++VE+FL    
Sbjct: 420  GEQIRAQLRTPNPDRIFAVRHALQIGISNEEIYELTGIDPWFLDKMQQLLEVEKFLKRTP 479

Query: 566  VSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANT 625
            +  +TK+  Y VKR G+SD+QIA+ATK+TE EVR  R  LG+ P YK VDTCAAEFEA T
Sbjct: 480  LQQLTKEQMYAVKRDGYSDRQIAYATKTTEDEVRAYRQQLGINPVYKTVDTCAAEFEAFT 539

Query: 626  PYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNS 685
            PY YS+Y+ E E  P+ K KV+ILGGGPNRIGQGIEFDYCCCH +++L+ AGYETIM+NS
Sbjct: 540  PYYYSTYEEETEVLPSTKPKVMILGGGPNRIGQGIEFDYCCCHAAYALKGAGYETIMVNS 599

Query: 686  NPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLD-- 743
            NPETVSTDYDTSDRLYFEPLT EDVLN+I+ E P GIIVQFGGQTPLKL++P+ +YL   
Sbjct: 600  NPETVSTDYDTSDRLYFEPLTKEDVLNIIEAENPVGIIVQFGGQTPLKLAVPLQKYLQGL 659

Query: 744  ------EHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEAD 797
                   H         + +IWGTSPDSID AE+RERF  I+++L+I QP  GIA+S  D
Sbjct: 660  EPGEESAHSSCPIPQSPIPKIWGTSPDSIDMAENRERFEKILQQLNIAQPPNGIARSYED 719

Query: 798  ALAIAKEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAI 857
            AL +A+ IGYPVVVRPSYVLGGRAMEIVY+D  L  Y+  AV+V+PE P+LIDK+L +AI
Sbjct: 720  ALIVARRIGYPVVVRPSYVLGGRAMEIVYSDTELERYMTFAVQVEPEHPILIDKFLENAI 779

Query: 858  EIDVDALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKR 917
            E+DVDA+AD  G VVIGGIMEHIEQAG+HSGDSAC +P+ ++  + L+ I +WT++LA+ 
Sbjct: 780  EVDVDAIADHTGRVVIGGIMEHIEQAGIHSGDSACSLPSISLPPAVLNQIRTWTVQLAQA 839

Query: 918  LNVCGLMNCQYAI----TTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSL 973
            L+V GLMN Q+A+    + S  VY+LEANPRASRTVPFVSKA G  LAK A+L+MSGK+L
Sbjct: 840  LSVVGLMNIQFAVIGASSYSPQVYILEANPRASRTVPFVSKATGVQLAKLASLIMSGKTL 899

Query: 974  NDLGFTKEVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIA 1033
             +L FT+EVIP H++VKEAVLPF KF G D +LGPEMRSTGEVMGID  F  AFAKA+I 
Sbjct: 900  EELNFTEEVIPSHIAVKEAVLPFSKFPGTDTILGPEMRSTGEVMGIDKDFGRAFAKAEIG 959

Query: 1034 AGQKLPLSGTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKM 1093
            AG++LPL+GTVF+S++D  K     + K F+D+GF +++TSGT   L+   + VE VLK+
Sbjct: 960  AGERLPLAGTVFVSMSDRDKAAAVNVVKEFIDLGFTVMATSGTRRVLQENDLDVELVLKL 1019

Query: 1094 HEGRPHAGDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEA 1153
            HEGRPH  D + N +IQ+++ T SG+   Q D   +RR  LAYK+P+ITT++GA A   A
Sbjct: 1020 HEGRPHVLDAIKNQKIQLIINTPSGEEA-QTDARLIRRTALAYKIPIITTIAGAKATVAA 1078

Query: 1154 IRSLKSNTVTMTALQDF 1170
            I SL++ T+ + +LQD+
Sbjct: 1079 IHSLQTTTLDVKSLQDY 1095


>gi|440682242|ref|YP_007157037.1| carbamoyl-phosphate synthase large subunit [Anabaena cylindrica PCC
            7122]
 gi|428679361|gb|AFZ58127.1| carbamoyl-phosphate synthase large subunit [Anabaena cylindrica PCC
            7122]
          Length = 1098

 Score = 1526 bits (3952), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 732/1096 (66%), Positives = 893/1096 (81%), Gaps = 13/1096 (1%)

Query: 86   LGKRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGL 145
            + +R DLRKIL+LG+GPIVIGQACEFDYSGTQACKAL+EEGYEV+L+NSNPATIMTDP  
Sbjct: 1    MPRREDLRKILLLGSGPIVIGQACEFDYSGTQACKALREEGYEVVLVNSNPATIMTDPET 60

Query: 146  ADRTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKL 205
            ADRTYI P+TPE+VE+V+ KERPDALLPTMGGQTALNLAVALA++G LEKY VELIGAKL
Sbjct: 61   ADRTYIEPLTPEIVEKVIAKERPDALLPTMGGQTALNLAVALAKNGVLEKYNVELIGAKL 120

Query: 206  DAIKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGG 265
             AI+KAEDR LF +AM  IGV   PSG  +TL+E  +IA +IG +PLIIRPAFT+GGTGG
Sbjct: 121  PAIEKAEDRKLFNEAMAKIGVAVCPSGTASTLEESKAIARQIGTYPLIIRPAFTMGGTGG 180

Query: 266  GIAYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDP 325
            GIAYNKEEFE + + G+ AS  SQ+L+++SLLGWKEYELEVMRDLADNVVIICSIEN+DP
Sbjct: 181  GIAYNKEEFEEMAQVGIDASPVSQILIDQSLLGWKEYELEVMRDLADNVVIICSIENLDP 240

Query: 326  MGVHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIE 385
            MG+HTGDSITVAPAQTLTDKEYQRLRD +I IIREIGVE GGSN+QFAVNP +G+V+VIE
Sbjct: 241  MGIHTGDSITVAPAQTLTDKEYQRLRDMAIKIIREIGVETGGSNIQFAVNPENGDVVVIE 300

Query: 386  MNPRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIP 445
            MNPRVSRSSAL+SKATGFPIAK+AAKL+VGY+L+++ NDITKKTPASFEP+IDYVVTKIP
Sbjct: 301  MNPRVSRSSALSSKATGFPIAKIAAKLAVGYTLNELQNDITKKTPASFEPTIDYVVTKIP 360

Query: 446  RFAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWD 505
            RFAFEKFPGSEP+LTTQMKSVGEAMA+GRTF ESFQKALRSLE G +GWGC   ++L   
Sbjct: 361  RFAFEKFPGSEPVLTTQMKSVGEAMAIGRTFNESFQKALRSLETGRAGWGCDKAEKLP-S 419

Query: 506  WEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQS 565
             EQ++  LR PNP+R+ ++  AM+ GM  DEI+EL+ ID WFL + ++L++VE+FL    
Sbjct: 420  GEQIRAQLRTPNPERIFSVRHAMQLGMSNDEIYELTAIDPWFLDKLQQLLEVEKFLKRTP 479

Query: 566  VSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANT 625
            +  +TK+  Y VKR G+SD+QIA+ATK+ E EVR  R SLGVIP YK VDTCAAEFEA T
Sbjct: 480  LKQLTKEQMYAVKRDGYSDRQIAYATKTNEDEVRAYRKSLGVIPVYKTVDTCAAEFEALT 539

Query: 626  PYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNS 685
            PY YS+Y+ E E  PT K KV+ILGGGPNRIGQGIEFDYCCCH +++L  AGYETIM+NS
Sbjct: 540  PYYYSTYEEETEVLPTTKPKVMILGGGPNRIGQGIEFDYCCCHAAYALHGAGYETIMVNS 599

Query: 686  NPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDE- 744
            NPETVSTDYDTSDRLYFEPLT EDVLN+ID E P GIIVQFGGQTPLKL++P+ QYL++ 
Sbjct: 600  NPETVSTDYDTSDRLYFEPLTKEDVLNIIDTENPVGIIVQFGGQTPLKLAVPLQQYLEQL 659

Query: 745  -----HRLPSASGD-GLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADA 798
                 ++ P    D  + +IWGTSPDSID AE+RERF  I+ +L+I QP  G+A+S  DA
Sbjct: 660  ESGDIYQCPVPHPDFPIPKIWGTSPDSIDMAENRERFEKILNKLNIAQPPNGMARSYEDA 719

Query: 799  LAIAKEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIE 858
            L +AK IGYPVVVRPSYVLGGRAMEIVY+D  L  Y+  AV V+P+ P+LIDK+L +AIE
Sbjct: 720  LIVAKRIGYPVVVRPSYVLGGRAMEIVYSDAELERYMTFAVLVEPDHPILIDKFLENAIE 779

Query: 859  IDVDALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRL 918
            +DVDA+AD  G VVIGGIMEHIEQAG+HSGDSAC +P+ ++S + L+ I +WT++LA+ L
Sbjct: 780  VDVDAIADHTGRVVIGGIMEHIEQAGIHSGDSACSLPSISLSPAVLNQIRTWTVQLAQAL 839

Query: 919  NVCGLMNCQYAI----TTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLN 974
            +V GLMN Q+A+    + S  VY+LEANPRASRTVPFVSKA G  LAK A+L+MSGK+L 
Sbjct: 840  SVVGLMNIQFAVVGANSYSPQVYILEANPRASRTVPFVSKATGIQLAKLASLIMSGKTLE 899

Query: 975  DLGFTKEVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAA 1034
            +L FT+EVIP H++VKEAVLPF KF G D +LGPEMRSTGEVMGID  F  AFAKA++ A
Sbjct: 900  ELNFTQEVIPSHIAVKEAVLPFSKFPGTDTILGPEMRSTGEVMGIDSDFGRAFAKAELGA 959

Query: 1035 GQKLPLSGTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMH 1094
            G+ LPL G+VF+S++D  K     + K F+ +GF +++T GT   L+ KG+ +E +LK+H
Sbjct: 960  GEMLPLKGSVFVSMSDRDKALAVDVVKEFIALGFNVIATQGTRQVLQEKGLKIEPILKLH 1019

Query: 1095 EGRPHAGDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAI 1154
            EGRPH  D + N QIQ+++ T SG+     D   +RR  LAYK+P+ITT++GA A   AI
Sbjct: 1020 EGRPHVLDAIKNQQIQLIINTPSGEEA-HTDARLIRRTALAYKIPIITTIAGAKATVAAI 1078

Query: 1155 RSLKSNTVTMTALQDF 1170
            RSL++ T+ +  +QD+
Sbjct: 1079 RSLQNTTLDVKTIQDY 1094


>gi|422305002|ref|ZP_16392339.1| carbamoyl phosphate synthase, large subunit [Microcystis aeruginosa
            PCC 9806]
 gi|389789777|emb|CCI14288.1| carbamoyl phosphate synthase, large subunit [Microcystis aeruginosa
            PCC 9806]
          Length = 1081

 Score = 1526 bits (3951), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 739/1088 (67%), Positives = 892/1088 (81%), Gaps = 10/1088 (0%)

Query: 86   LGKRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGL 145
            + +R DL+KILILGAGPIVIGQACEFDYSGTQACKAL+EEGYEVIL+NSNPA+IMTDP +
Sbjct: 1    MPRRDDLQKILILGAGPIVIGQACEFDYSGTQACKALREEGYEVILVNSNPASIMTDPEM 60

Query: 146  ADRTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKL 205
            ADRTYI P+ PE+VE+++ KERPDA+LPTMGGQTALN AVALA+SG LEKY VELIGAKL
Sbjct: 61   ADRTYIEPILPEIVEKIIAKERPDAILPTMGGQTALNTAVALAKSGVLEKYNVELIGAKL 120

Query: 206  DAIKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGG 265
             AI+KAEDR+LFKQAM+ IGV   PSGI N L+E  +IA++IG +PLIIRPAFTLGGTGG
Sbjct: 121  PAIEKAEDRELFKQAMEKIGVPVCPSGIANNLEEAKAIAHQIGSYPLIIRPAFTLGGTGG 180

Query: 266  GIAYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDP 325
            GIAYN+EEFE + + GL  S TSQ+LVEKSL+GWKEYELEVMRDLADNVVIICSIEN DP
Sbjct: 181  GIAYNQEEFEPMAQYGLDCSPTSQILVEKSLIGWKEYELEVMRDLADNVVIICSIENFDP 240

Query: 326  MGVHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIE 385
            MGVHTGDSITVAPAQTLTDKEYQRLRDYS AIIREIGVE GGSN+QF+VNP +G+V+VIE
Sbjct: 241  MGVHTGDSITVAPAQTLTDKEYQRLRDYSKAIIREIGVETGGSNIQFSVNPTNGDVIVIE 300

Query: 386  MNPRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIP 445
            MNPRVSRSSALASKATGFPIAK AAKL+VGY+LD+IPNDITKKTPASFEP+IDYVVTKIP
Sbjct: 301  MNPRVSRSSALASKATGFPIAKFAAKLAVGYTLDEIPNDITKKTPASFEPTIDYVVTKIP 360

Query: 446  RFAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWD 505
            RFAFEKFPGS+P+LTTQMKSVGEAMA+GRTFQESFQKALRSLE G  G+GC  V+ L   
Sbjct: 361  RFAFEKFPGSQPILTTQMKSVGEAMAIGRTFQESFQKALRSLETGRFGFGCDKVETLP-P 419

Query: 506  WEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQS 565
              +++ SLR PNP+R+ +IY A K GM  +EIHEL+ ID WFL +  +L++ E+FL    
Sbjct: 420  LSEVRASLRTPNPERVYSIYHAFKLGMNGEEIHELTGIDPWFLDKLADLMETEKFLKRTP 479

Query: 566  VSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANT 625
            + ++ ++D + +K++GFSD+QIAFAT ++E EVR  R  LG++P YK VDTCAAEFEA T
Sbjct: 480  LKSLRQEDLFAIKQQGFSDRQIAFATNTSEDEVRSYRKGLGIVPVYKMVDTCAAEFEALT 539

Query: 626  PYMYSSYD-FECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMN 684
            PY YS+Y+  E E  P+ K+KV+ILGGGPNRIGQGIEFDYCCCH +FSL +AG+ETIM+N
Sbjct: 540  PYYYSTYEQVESEVLPSDKRKVMILGGGPNRIGQGIEFDYCCCHAAFSLSNAGFETIMVN 599

Query: 685  SNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDE 744
            SNPETVSTDYDTSDRLYFEPLT EDVLN+I+ E+PEG+I+QFGGQTPLKL++P+ +YL+ 
Sbjct: 600  SNPETVSTDYDTSDRLYFEPLTKEDVLNIIEAEQPEGLIIQFGGQTPLKLAVPLQKYLES 659

Query: 745  HRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKE 804
               P  +     +IWGTSPDSIDAAEDRERF  I+++L I QP  GIA+S  ++ A+AK 
Sbjct: 660  PNCPVNT-----KIWGTSPDSIDAAEDRERFEKILRQLDIRQPPNGIARSFQESQAVAKR 714

Query: 805  IGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDAL 864
            IGYPVVVRPSYVLGGRAMEIVY+D  L  Y++ AV+++P+ P+LIDK+L +AIE+DVDAL
Sbjct: 715  IGYPVVVRPSYVLGGRAMEIVYSDSELERYMKYAVQIEPDHPILIDKFLENAIEVDVDAL 774

Query: 865  ADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLM 924
            +D+ G VVIGG+MEHIEQAGVHSGDSAC IP  ++S+S L TI  WT++LAK L V GLM
Sbjct: 775  SDTTGTVVIGGLMEHIEQAGVHSGDSACSIPHTSLSASVLTTIRQWTVELAKALKVIGLM 834

Query: 925  NCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIP 984
            N QYA+     VY+LEANPRASRTVP+VSKA G PLAK A+LVMSGK+L +LG   E IP
Sbjct: 835  NIQYAVQGE-TVYILEANPRASRTVPYVSKATGVPLAKVASLVMSGKTLTELGIISEAIP 893

Query: 985  KHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTV 1044
            +H++VKEAVLPF+KF G D LLGPEMRSTGEVMGID  F  AFAKA++AAG  L  SGTV
Sbjct: 894  RHIAVKEAVLPFQKFPGADTLLGPEMRSTGEVMGIDSDFGKAFAKAEMAAGVILATSGTV 953

Query: 1045 FLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIA-VERVLKMHEGRPHAGDM 1103
            F+S+ND  K  +  + K    +GF++V+TSGT   L   G   ++ VLK+HEGRPH  D 
Sbjct: 954  FVSMNDRDKTPMVPVVKDLQSLGFRVVATSGTREVLLENGCENIDLVLKIHEGRPHVIDW 1013

Query: 1104 VANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTVT 1163
            + N  IQ +V T SG+   Q DG ++RR  L YK+P+ITT++GA A   A++SL+S  + 
Sbjct: 1014 IKNDWIQFIVNTPSGEE-SQNDGRQIRRTALDYKLPIITTIAGAKATVAALKSLQSQPLE 1072

Query: 1164 MTALQDFF 1171
            + ALQD+ 
Sbjct: 1073 VKALQDYL 1080


>gi|428312109|ref|YP_007123086.1| carbamoyl-phosphate synthase large subunit [Microcoleus sp. PCC 7113]
 gi|428253721|gb|AFZ19680.1| carbamoyl-phosphate synthase large subunit [Microcoleus sp. PCC 7113]
          Length = 1086

 Score = 1526 bits (3950), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 738/1090 (67%), Positives = 897/1090 (82%), Gaps = 9/1090 (0%)

Query: 86   LGKRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGL 145
            + +R DL KIL+LG+GPIVIGQACEFDYSGTQACKAL+EEGYEV+L+NSNPA+IMTDP  
Sbjct: 1    MPRRDDLHKILLLGSGPIVIGQACEFDYSGTQACKALREEGYEVVLVNSNPASIMTDPET 60

Query: 146  ADRTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKL 205
            ADRTYI P+TPE+VE+V+EKERPDALLPTMGGQTALNLAVALA++G LEKYGVELIGAKL
Sbjct: 61   ADRTYIEPLTPEIVEKVIEKERPDALLPTMGGQTALNLAVALAKNGVLEKYGVELIGAKL 120

Query: 206  DAIKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGG 265
             AI+ AEDR LFK+AM+ IGV   PSGI N +DE  +IA +IG +PLIIRPAFTLGGTGG
Sbjct: 121  PAIEMAEDRQLFKEAMERIGVAVCPSGIVNNMDEAKNIARQIGSYPLIIRPAFTLGGTGG 180

Query: 266  GIAYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDP 325
            GIAYN+EE+E + + G+ AS  SQ+LVEKSLLGWKEYELEVMRDLADNVVIICSIEN+DP
Sbjct: 181  GIAYNQEEYEEMAQVGIDASPMSQILVEKSLLGWKEYELEVMRDLADNVVIICSIENIDP 240

Query: 326  MGVHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIE 385
            MG+HTGDSITVAPAQTLTDKEYQRLRD SI IIREIGVE GGSN+QFA+NPV G+++VIE
Sbjct: 241  MGIHTGDSITVAPAQTLTDKEYQRLRDASIKIIREIGVETGGSNIQFAINPVTGDLIVIE 300

Query: 386  MNPRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIP 445
            MNPRVSRSSALASKATGFPIAKMAAKL+VGY+LD+IPNDITKKTPASFEP+IDYVVTK+P
Sbjct: 301  MNPRVSRSSALASKATGFPIAKMAAKLAVGYTLDEIPNDITKKTPASFEPTIDYVVTKVP 360

Query: 446  RFAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWD 505
            RFAFEKFPG+EP+LTTQMKSVGEAMA+GRTFQESFQKALRSLE G +GWGC   ++L   
Sbjct: 361  RFAFEKFPGAEPVLTTQMKSVGEAMAIGRTFQESFQKALRSLETGRAGWGCDQAEKLP-S 419

Query: 506  WEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQS 565
             EQ++  LR PNP+R+  +  AM+ GM V+E++EL+ ID WFL +F++L+D E+FL    
Sbjct: 420  LEQIRAGLRTPNPERIFTVRHAMQMGMTVEEVYELTNIDPWFLDKFEQLLDTEKFLKRTP 479

Query: 566  VSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANT 625
            +  +TK+  ++VKR+GFSD+QIAFATK+TE EVR  R SLG++P YK VDTCAAEFEA T
Sbjct: 480  LKQLTKEQLWDVKRQGFSDRQIAFATKTTEDEVRAYRKSLGIVPVYKVVDTCAAEFEAFT 539

Query: 626  PYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNS 685
            PY YS+Y+ E E  P+ ++KV+ILGGGPNRIGQGIEFDYCCCH S++L   G+ETIM+NS
Sbjct: 540  PYYYSTYEEETEVLPSDRRKVMILGGGPNRIGQGIEFDYCCCHASYALSKQGFETIMVNS 599

Query: 686  NPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEH 745
            NPETVSTDYDTSDRLYFEPLT EDVLN+I+ E+PEGII+QFGGQTPLKL++P+ ++L   
Sbjct: 600  NPETVSTDYDTSDRLYFEPLTKEDVLNIIETEQPEGIIIQFGGQTPLKLAVPLQEFL--- 656

Query: 746  RLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEI 805
            R P      L +IWGTSPDSID AEDRE+F  I+++L I+QP  G A+S ++AL +AK I
Sbjct: 657  RRPDIQESLLTKIWGTSPDSIDIAEDREKFEKILRKLDIKQPPNGAARSYSEALDVAKRI 716

Query: 806  GYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALA 865
             YPVVVRPSYVLGGRAMEIVY+D  L  Y+  AV+V+PE P+LIDK+L +A+E+DVDA+A
Sbjct: 717  SYPVVVRPSYVLGGRAMEIVYSDMELERYMTFAVQVEPEHPILIDKFLENAVEVDVDAIA 776

Query: 866  DSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMN 925
            D  G VVIGGIMEHIEQAG+HSGDSAC +P+ ++  + LD I +WT++LAK L V GLMN
Sbjct: 777  DHTGRVVIGGIMEHIEQAGIHSGDSACSLPSVSLPPTVLDKIRTWTVELAKELKVIGLMN 836

Query: 926  CQYAIT----TSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKE 981
             Q+A+         VY+LEANPRASRT+P+VSKA G PLA  A+ +MSG++L  L  T+E
Sbjct: 837  IQFAVVGLQGYEPQVYILEANPRASRTIPYVSKATGVPLAGLASRIMSGETLESLELTQE 896

Query: 982  VIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLS 1041
               KHV+VKEAVLPFEKF G DV+LGPEMRSTGEVMGID+ F  AFAKA++ A Q LPLS
Sbjct: 897  PTIKHVAVKEAVLPFEKFAGTDVILGPEMRSTGEVMGIDVDFGKAFAKAELGANQHLPLS 956

Query: 1042 GTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAG 1101
            GTVF+S +D  KP +  + K F+ +GF +V+T GT   L+  GI VE VLK+HEGRPH  
Sbjct: 957  GTVFVSTSDRDKPSVVPVVKDFIALGFHVVATEGTRLALKDHGIDVELVLKLHEGRPHVL 1016

Query: 1102 DMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNT 1161
            D + N QIQ+++ T SG+   ++DG  +RR  LAYKVP++TT++GA A A AIRSL+S  
Sbjct: 1017 DWIKNKQIQLIINTPSGEEA-RVDGRLIRRSSLAYKVPIVTTIAGAKATAAAIRSLQSQP 1075

Query: 1162 VTMTALQDFF 1171
            + + ALQD+ 
Sbjct: 1076 LEVKALQDYI 1085


>gi|119513297|ref|ZP_01632337.1| carbamoyl-phosphate synthase large subunit [Nodularia spumigena
            CCY9414]
 gi|119462060|gb|EAW43057.1| carbamoyl-phosphate synthase large subunit [Nodularia spumigena
            CCY9414]
          Length = 1088

 Score = 1525 bits (3948), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 732/1091 (67%), Positives = 890/1091 (81%), Gaps = 14/1091 (1%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            +R D+ KIL+LG+GPIVIGQACEFDYSGTQACKAL+EEGYEV+L+NSNPATIMTDP  AD
Sbjct: 3    RRQDIHKILLLGSGPIVIGQACEFDYSGTQACKALREEGYEVVLVNSNPATIMTDPETAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
            RTYI P+TP+ VE+V+ KERPDALLPTMGGQTALNLAVALA++GAL+KY VELIGAKL A
Sbjct: 63   RTYIEPLTPDFVEKVIAKERPDALLPTMGGQTALNLAVALAKNGALDKYNVELIGAKLPA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I+KAEDR LF +AM  IGV   PSG  ++L E   IA +IG +PLIIRPAFT+GGTGGGI
Sbjct: 123  IEKAEDRKLFNEAMAKIGVAVCPSGTASSLAESKEIAAKIGTYPLIIRPAFTMGGTGGGI 182

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYNKEEFE + + G+ AS  SQ+L+++SLLGWKEYELEVMRDLADNVVIICSIEN+DPMG
Sbjct: 183  AYNKEEFEEMAQVGIDASPVSQILIDQSLLGWKEYELEVMRDLADNVVIICSIENLDPMG 242

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            +HTGDSITVAPAQTLTDKEYQRLRD +I IIREIGVE GGSN+QFAVNPV G+V+VIEMN
Sbjct: 243  IHTGDSITVAPAQTLTDKEYQRLRDMAIKIIREIGVETGGSNIQFAVNPVTGDVVVIEMN 302

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRF 447
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD+I NDITK+TPASFEP+IDYVVTKIPRF
Sbjct: 303  PRVSRSSALASKATGFPIAKIAAKLAVGYTLDEIKNDITKQTPASFEPTIDYVVTKIPRF 362

Query: 448  AFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDWE 507
            AFEKFPGS+P+LTTQMKSVGEAMA+GRTF ESFQKALRSLE G +GWGC   ++L    E
Sbjct: 363  AFEKFPGSDPVLTTQMKSVGEAMAIGRTFNESFQKALRSLETGRAGWGCDQSEKLP-SGE 421

Query: 508  QLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSVS 567
            Q++  LR P+PDR+ A+  A++ G+  +EI+EL+ ID WFL + ++L+DVE+FL    ++
Sbjct: 422  QIRALLRTPHPDRIFAVRHALQLGLSTEEIYELTAIDPWFLDKLQQLLDVEKFLKRTPLT 481

Query: 568  NMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTPY 627
             +TK+ FY VKR GFSD+QIAFATK+TE EVR  R  LGVIP YK VDTCAAEFEA TPY
Sbjct: 482  QLTKEQFYAVKRDGFSDRQIAFATKTTEDEVRSYRKELGVIPVYKTVDTCAAEFEAFTPY 541

Query: 628  MYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSNP 687
             YS+Y+ E E  PT K KV+ILGGGPNRIGQGIEFDYCCCH +++L+ AG+ETIM+NSNP
Sbjct: 542  YYSTYEDETEVLPTSKPKVMILGGGPNRIGQGIEFDYCCCHAAYALKKAGFETIMVNSNP 601

Query: 688  ETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEH-R 746
            ETVSTDYDTSDRLYFEPLT EDV+N+I+ E+P G+I+QFGGQTPLKL++P+ ++L  H  
Sbjct: 602  ETVSTDYDTSDRLYFEPLTKEDVINIIEAEKPVGVIIQFGGQTPLKLAVPLEEFLKNHPS 661

Query: 747  LPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEIG 806
            LP+       +IWGTSPDSID AE+RERF  I+ EL+I QP  GIA+S  DAL +AK IG
Sbjct: 662  LPT-------KIWGTSPDSIDMAENRERFEKILNELNIAQPPNGIARSYDDALIVAKRIG 714

Query: 807  YPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALAD 866
            YPVVVRPSYVLGGRAMEIVY+D  L  Y+  AV V+PE P+LIDK+L +AIE+DVDA+AD
Sbjct: 715  YPVVVRPSYVLGGRAMEIVYSDTDLERYMTFAVLVEPEHPILIDKFLENAIEVDVDAIAD 774

Query: 867  SCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNC 926
              G VVIGGIMEHIEQAG+HSGDSAC +P+ ++S + L  I +WT++LA+ L+V GLMN 
Sbjct: 775  HTGRVVIGGIMEHIEQAGIHSGDSACSLPSISLSPAVLQQIRTWTVQLAQALSVVGLMNI 834

Query: 927  QYAIT----TSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEV 982
            Q+A+      S  VY+LEANPRASRTVPFVSK+ G PLAK A+L+MSGK+L +L FT+EV
Sbjct: 835  QFAVVGAQGYSPQVYILEANPRASRTVPFVSKSTGIPLAKVASLIMSGKTLEELNFTEEV 894

Query: 983  IPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSG 1042
            IP H++VKEAVLPF KF G D +LGPEMRSTGEVMGID SF  AFAKA++AAG+ LPL G
Sbjct: 895  IPAHIAVKEAVLPFNKFPGTDTILGPEMRSTGEVMGIDSSFGRAFAKAELAAGEFLPLKG 954

Query: 1043 TVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGD 1102
            TVF+S++D  K     + K  + +GF +++T GT   L+  G+ VE VLK+HEGRPH  D
Sbjct: 955  TVFVSMSDRDKSDAVNVVKELMTLGFTVMATLGTRRVLQENGLDVELVLKLHEGRPHVLD 1014

Query: 1103 MVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTV 1162
             + N +IQ+++ T SG+   Q D   +RR  LAYK+P+ITT++GA A   AI SL++ T+
Sbjct: 1015 AIKNQKIQLIINTPSGEEA-QTDARLIRRTALAYKIPIITTIAGARATVAAIHSLQTTTL 1073

Query: 1163 TMTALQDFFDV 1173
             +  +QD+  V
Sbjct: 1074 DVKVIQDYCQV 1084


>gi|416381456|ref|ZP_11684208.1| Carbamoyl-phosphate synthase large chain [Crocosphaera watsonii WH
            0003]
 gi|357265523|gb|EHJ14278.1| Carbamoyl-phosphate synthase large chain [Crocosphaera watsonii WH
            0003]
          Length = 1081

 Score = 1524 bits (3947), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 739/1086 (68%), Positives = 887/1086 (81%), Gaps = 10/1086 (0%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            +R DL+KILILGAGPIVIGQACEFDYSGTQACKAL+EEGYEV+L+NSNPA+IMTDPG+A+
Sbjct: 3    RREDLKKILILGAGPIVIGQACEFDYSGTQACKALREEGYEVVLVNSNPASIMTDPGMAN 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
            RTYI P+TP++VE+V+ KERPDALLPTMGGQTALN+AVALA++G L+KY VELIGAKL A
Sbjct: 63   RTYIEPLTPDMVEKVIAKERPDALLPTMGGQTALNVAVALAKNGVLDKYNVELIGAKLPA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I+KAEDRDLFK+AM  IGV   PSGI +TL E  +I  EIG +PLIIRPAFTLGGTGGGI
Sbjct: 123  IEKAEDRDLFKEAMNKIGVPVCPSGIASTLKEAKAIGEEIGFYPLIIRPAFTLGGTGGGI 182

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEFE + + G+ AS  SQ+LVEKSLLGWKEYELEVMRDLADNVVIICSIEN DPMG
Sbjct: 183  AYNQEEFEEMAQFGIDASPVSQILVEKSLLGWKEYELEVMRDLADNVVIICSIENFDPMG 242

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQRLRDYS AIIREIGVE GGSN+QF+VNP++G+V+VIEMN
Sbjct: 243  VHTGDSITVAPAQTLTDKEYQRLRDYSQAIIREIGVETGGSNIQFSVNPLNGDVIVIEMN 302

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRF 447
            PRVSRSSALASKATGFPIAK AAKL+VGY+L++I NDITK+TPASFEP+IDYVVTKIPRF
Sbjct: 303  PRVSRSSALASKATGFPIAKFAAKLAVGYTLNEINNDITKQTPASFEPTIDYVVTKIPRF 362

Query: 448  AFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDWE 507
            AFEKFPGS+ +LTTQMKSVGEAMA+GRTFQESFQKALRSLE G  G+GC   + L     
Sbjct: 363  AFEKFPGSQAILTTQMKSVGEAMAIGRTFQESFQKALRSLETGRYGFGCDRTETLP-SLS 421

Query: 508  QLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSVS 567
            Q++ +LR PNP+R+ +IY AM+ GM  +EIHEL+ ID WFL + +++I+ E+ L   +++
Sbjct: 422  QVRSNLRTPNPERVYSIYHAMRLGMTPEEIHELTAIDIWFLDKLQDIIETEKVLKQTNLN 481

Query: 568  NMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTPY 627
            ++T  D   +K++GFSD+QIAFATK+TE EVR  R  LG+IP YK VDTCAAEFEA TPY
Sbjct: 482  DITASDLRAIKQKGFSDRQIAFATKTTEDEVRNYRKGLGIIPVYKVVDTCAAEFEAYTPY 541

Query: 628  MYSSYD-FECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSN 686
             YS+Y+  E E   T+KKKV+ILGGGPNRIGQGIEFDYCCCH SFSL  AG+ETIM+NSN
Sbjct: 542  YYSTYEPEETEVTVTEKKKVMILGGGPNRIGQGIEFDYCCCHASFSLSDAGFETIMVNSN 601

Query: 687  PETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHR 746
            PETVSTDYDTSDRLYFEPLT EDVLN+I+ E P G+I+QFGGQTPLKL++P+  YLD   
Sbjct: 602  PETVSTDYDTSDRLYFEPLTKEDVLNIIETENPVGVIIQFGGQTPLKLAVPLQTYLDSPE 661

Query: 747  LPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEIG 806
             P  +     +IWGTSPDSID AEDRERF  I+ +L I+QP  GIA+S  ++  ++  IG
Sbjct: 662  CPVQT-----KIWGTSPDSIDTAEDRERFEKILNDLDIKQPPNGIARSYEESAVVSSRIG 716

Query: 807  YPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALAD 866
            YPVVVRPSYVLGGRAMEIVY+DE L  Y+  AV+V+P+ P+LIDK+L +AIE+DVDAL D
Sbjct: 717  YPVVVRPSYVLGGRAMEIVYSDEELERYMTYAVQVEPDHPILIDKFLQNAIEVDVDALCD 776

Query: 867  SCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNC 926
            + G VVIGGIMEHIEQAGVHSGDSAC +P  T+SS+ ++TI +WT +LA  L V GLMN 
Sbjct: 777  ATGKVVIGGIMEHIEQAGVHSGDSACSVPFTTLSSNAIETIRTWTTQLANSLKVVGLMNI 836

Query: 927  QYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPKH 986
            QYA+     VY+LEANPRASRTVP+VSKA G PLAK A+LVMSGK+L +LG T+E +P+H
Sbjct: 837  QYAVQGE-QVYILEANPRASRTVPYVSKATGRPLAKIASLVMSGKTLEELGITEEFVPRH 895

Query: 987  VSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVFL 1046
            ++VKEAVLPF+KF G D LLGPEMRSTGEVMGID  F  AFAKA+IAAG  L   GTVF+
Sbjct: 896  IAVKEAVLPFQKFPGADTLLGPEMRSTGEVMGIDEDFGKAFAKAEIAAGVDLATEGTVFV 955

Query: 1047 SLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGI-AVERVLKMHEGRPHAGDMVA 1105
            S++D  K     + K  +++GFK+V+TSGT   LE  GI  VE VLK+HEGRPH  D + 
Sbjct: 956  SMSDRDKISTVPVVKDLVNLGFKVVATSGTQKVLEENGIEGVEVVLKLHEGRPHVIDWIK 1015

Query: 1106 NGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTVTMT 1165
            N QIQ ++ T SG+     DG ++RR  L YK+P+ITT++GA A   AIRSL++  + + 
Sbjct: 1016 NKQIQFIINTPSGED-SHADGRRIRRTALDYKLPIITTIAGAKATVAAIRSLQTEPLEVK 1074

Query: 1166 ALQDFF 1171
            ALQD+ 
Sbjct: 1075 ALQDYI 1080


>gi|428211703|ref|YP_007084847.1| carbamoyl-phosphate synthase large subunit [Oscillatoria acuminata
            PCC 6304]
 gi|428000084|gb|AFY80927.1| carbamoyl-phosphate synthase large subunit [Oscillatoria acuminata
            PCC 6304]
          Length = 1086

 Score = 1524 bits (3947), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 732/1090 (67%), Positives = 891/1090 (81%), Gaps = 11/1090 (1%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            +R D++KILI+G+GPIVIGQACEFDYSGTQACKAL+EEGYEV+L+NSNPATIMTDP  AD
Sbjct: 3    RRNDIQKILIIGSGPIVIGQACEFDYSGTQACKALREEGYEVVLVNSNPATIMTDPETAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
            RTYI P+ PE++E+V+ KERPDALLPTMGGQTALNLAV LA++G L+KYGVELIGAKL+A
Sbjct: 63   RTYIEPLIPEVLEKVIAKERPDALLPTMGGQTALNLAVTLAKNGVLDKYGVELIGAKLEA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I+KAEDR LFK+AM  IGV T PSGI  TLDE  ++  +IG +PLIIRPA+TLGGTGGGI
Sbjct: 123  IEKAEDRLLFKEAMARIGVATCPSGIATTLDEAKAVGQQIGSYPLIIRPAYTLGGTGGGI 182

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN++EFE +   G+ AS  SQ+L+E+SLLGWKEYELEVMRDLADNVVIICSIEN+DPMG
Sbjct: 183  AYNQKEFEIMAAGGIDASPVSQILIEQSLLGWKEYELEVMRDLADNVVIICSIENIDPMG 242

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            +HTGDSITVAPAQTLTDKEYQRLRD SIAIIREIGVE GGSN+QFA+NPV+G+++VIEMN
Sbjct: 243  IHTGDSITVAPAQTLTDKEYQRLRDASIAIIREIGVETGGSNIQFAINPVNGDLIVIEMN 302

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRF 447
            PRVSRSSALASKATGF IAK AAKL+VGY+LD+IPNDIT+KTPASFEP+IDYVVTKIPRF
Sbjct: 303  PRVSRSSALASKATGFAIAKFAAKLAVGYTLDEIPNDITRKTPASFEPTIDYVVTKIPRF 362

Query: 448  AFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDWE 507
            AFEKF GSEP LTTQMKSVGEAMA+GRTF ESFQKA+RS+E G SGWGC   +E+    E
Sbjct: 363  AFEKFSGSEPTLTTQMKSVGEAMAIGRTFNESFQKAMRSMETGRSGWGCDR-QEMLPSLE 421

Query: 508  QLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSVS 567
            Q++  LR PNPDR+  +  AM  GM V+EI+EL+ ID WFL +F+EL+++E+FL    + 
Sbjct: 422  QIRAGLRTPNPDRIFTVRHAMLMGMTVEEIYELTCIDVWFLDKFQELLEMEKFLKRSQLE 481

Query: 568  NMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTPY 627
            ++TK+D Y +KR+GFSD+QIAFATK+ E +VR  R+ LGV P YK VDTCAAEFEA TPY
Sbjct: 482  DLTKEDMYAIKRQGFSDRQIAFATKTDEDQVRSYRVGLGVKPVYKLVDTCAAEFEALTPY 541

Query: 628  MYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSNP 687
             YS+Y+ E E   + K+KV+ILGGGPNRIGQGIEFDYCCCH S++L+  G ETIM+NSNP
Sbjct: 542  YYSTYEEETEQTVSTKRKVMILGGGPNRIGQGIEFDYCCCHASYALREEGCETIMVNSNP 601

Query: 688  ETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYL----D 743
            ETVSTDYDTSDRLYFEPLT EDVLN+I++E PEG+I+QFGGQTPLKL++P+++ L     
Sbjct: 602  ETVSTDYDTSDRLYFEPLTKEDVLNIIEVENPEGVIIQFGGQTPLKLAIPLYEALMAQGP 661

Query: 744  EHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAK 803
               LP    +   +IWGTSPDSID AEDRERF  I+ EL I+QP  GIA+S  DALAIA+
Sbjct: 662  SRVLPK---EVTTKIWGTSPDSIDIAEDRERFEKILWELDIKQPANGIARSYEDALAIAQ 718

Query: 804  EIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDA 863
            ++GYPVVVRPSYVLGGRAMEIVY+D  L  Y++ AVEV+P+RP+LIDK+L +AIE+DVDA
Sbjct: 719  KVGYPVVVRPSYVLGGRAMEIVYSDADLERYMKFAVEVEPDRPILIDKFLENAIEVDVDA 778

Query: 864  LADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGL 923
            LAD+ G VVIGGIMEHIEQAG+HSGDSAC IP  ++  + L TI  WT+KLA++L V GL
Sbjct: 779  LADATGQVVIGGIMEHIEQAGIHSGDSACSIPYISLKPAALATIREWTVKLAQKLKVIGL 838

Query: 924  MNCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVI 983
            MN QYA+     VY+LEANPRASRTVPFVSKAIG PLAK A+L+MSGK+L  L +T+E I
Sbjct: 839  MNIQYAVQGE-QVYILEANPRASRTVPFVSKAIGIPLAKMASLIMSGKTLESLNYTEEKI 897

Query: 984  PKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGT 1043
            P+H++VKE VLPF KF G D LLGPEMRSTGEVMGID  F  AFAKA++ AG +L L GT
Sbjct: 898  PEHIAVKEVVLPFNKFPGSDTLLGPEMRSTGEVMGIDTDFGKAFAKAELGAGVRLALQGT 957

Query: 1044 VFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIA-VERVLKMHEGRPHAGD 1102
            VF+S+N   KP +  + + F+D+GFKI++T GT   L+ +G+  VE V K+HEGRPH  D
Sbjct: 958  VFVSMNHRDKPLVVPVIQEFMDLGFKIIATDGTRKVLQEQGLENVELVYKVHEGRPHVID 1017

Query: 1103 MVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTV 1162
             + N QIQ ++ T +G+   Q D   +RR  L Y++P+ITT++GA A   AIR+LK   +
Sbjct: 1018 WIKNEQIQFIINTPTGEE-SQTDARMIRRMALDYQLPIITTIAGAKATVAAIRALKGEPL 1076

Query: 1163 TMTALQDFFD 1172
             + A+QD+ +
Sbjct: 1077 EVKAIQDYLN 1086


>gi|390442313|ref|ZP_10230321.1| carbamoyl phosphate synthase, large subunit [Microcystis sp. T1-4]
 gi|389834356|emb|CCI34447.1| carbamoyl phosphate synthase, large subunit [Microcystis sp. T1-4]
          Length = 1081

 Score = 1524 bits (3945), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 739/1088 (67%), Positives = 891/1088 (81%), Gaps = 10/1088 (0%)

Query: 86   LGKRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGL 145
            + +R DL+KILILGAGPIVIGQACEFDYSGTQACKAL+EEGYEVIL+NSNPA+IMTDP +
Sbjct: 1    MPRRDDLQKILILGAGPIVIGQACEFDYSGTQACKALREEGYEVILVNSNPASIMTDPEM 60

Query: 146  ADRTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKL 205
            ADRTYI P+ PE+VE+++ KERPDA+LPTMGGQTALN AVALA+SG LEKY VELIGAKL
Sbjct: 61   ADRTYIEPILPEIVEKIIAKERPDAILPTMGGQTALNTAVALAKSGVLEKYNVELIGAKL 120

Query: 206  DAIKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGG 265
             AI+KAEDR+LFK+AM+ IGV   PSGI N L+E  +IA++IG +PLIIRPAFTLGGTGG
Sbjct: 121  PAIEKAEDRELFKKAMEKIGVPVCPSGIANNLEEAKAIAHQIGSYPLIIRPAFTLGGTGG 180

Query: 266  GIAYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDP 325
            GIAYN+EEFE + + GL  S TSQ+LVEKSL+GWKEYELEVMRDLADNVVIICSIEN DP
Sbjct: 181  GIAYNQEEFEPMAQYGLDCSPTSQILVEKSLIGWKEYELEVMRDLADNVVIICSIENFDP 240

Query: 326  MGVHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIE 385
            MGVHTGDSITVAPAQTLTDKEYQRLRDYS AIIREIGVE GGSN+QF+VNP +G+V+VIE
Sbjct: 241  MGVHTGDSITVAPAQTLTDKEYQRLRDYSKAIIREIGVETGGSNIQFSVNPTNGDVIVIE 300

Query: 386  MNPRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIP 445
            MNPRVSRSSALASKATGFPIAK AAKL+VGY+LD+IPNDITKKTPASFEP+IDYVVTKIP
Sbjct: 301  MNPRVSRSSALASKATGFPIAKFAAKLAVGYTLDEIPNDITKKTPASFEPTIDYVVTKIP 360

Query: 446  RFAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWD 505
            RFAFEKFPGS+P+LTTQMKSVGEAMA+GRTFQESFQKALRSLE G  G+GC  V+ L   
Sbjct: 361  RFAFEKFPGSQPILTTQMKSVGEAMAIGRTFQESFQKALRSLETGRFGFGCDKVETLP-P 419

Query: 506  WEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQS 565
              +++ SLR PNP+R+ +IY A K GM  +EIHEL+ ID WFL +  +L++ E+FL    
Sbjct: 420  LSEVRASLRTPNPERVYSIYHAFKLGMNGEEIHELTGIDPWFLDKLADLMETEKFLKRTP 479

Query: 566  VSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANT 625
            + ++ ++D + +K++GFSD+QIAFAT S+E EVR  R  LG++P YK VDTCAAEFEA T
Sbjct: 480  LKSLRQEDLFVIKQQGFSDRQIAFATNSSEDEVRSYRKGLGIVPVYKMVDTCAAEFEALT 539

Query: 626  PYMYSSYD-FECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMN 684
            PY YS+Y+  E E  P+ K+KV+ILGGGPNRIGQGIEFDYCCCH +FSL  AG+ETIM+N
Sbjct: 540  PYYYSTYEQVESEVLPSDKRKVMILGGGPNRIGQGIEFDYCCCHAAFSLSQAGFETIMVN 599

Query: 685  SNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDE 744
            SNPETVSTDYDTSDRLYFEPLT EDVLN+I+ E+PEG+I+QFGGQTPLKL++P+ +YL+ 
Sbjct: 600  SNPETVSTDYDTSDRLYFEPLTKEDVLNIIEAEQPEGLIIQFGGQTPLKLAVPLQKYLES 659

Query: 745  HRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKE 804
               P  +     +IWGTSPDSIDAAEDRERF  I+++L I QP  GIA+S  ++ A+AK 
Sbjct: 660  PNCPVNT-----KIWGTSPDSIDAAEDRERFEKILRQLDIRQPPNGIARSFQESQAVAKR 714

Query: 805  IGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDAL 864
            IGYPVVVRPSYVLGGRAMEIVY+D  L  Y++ AV+++P+ P+LIDK+L +AIE+DVDAL
Sbjct: 715  IGYPVVVRPSYVLGGRAMEIVYSDSELERYMKYAVQIEPDHPILIDKFLENAIEVDVDAL 774

Query: 865  ADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLM 924
            +D+ G VVIGG+MEHIEQAGVHSGDSAC IP  ++S+S L TI  WT++LAK L V GLM
Sbjct: 775  SDATGTVVIGGLMEHIEQAGVHSGDSACSIPHTSLSASVLTTIRQWTVELAKALKVIGLM 834

Query: 925  NCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIP 984
            N QYA+     VY+LEANPRASRTVP+VSKA G PLAK A+LVMSGK+L +LG   E IP
Sbjct: 835  NIQYAVQGE-TVYILEANPRASRTVPYVSKATGVPLAKVASLVMSGKTLAELGIISEAIP 893

Query: 985  KHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTV 1044
            +H++VKEAVLPF+KF G D LLGPEMRSTGEVMGID  F  AFAKA++AAG  L  SGTV
Sbjct: 894  RHIAVKEAVLPFQKFPGADTLLGPEMRSTGEVMGIDSDFGKAFAKAEMAAGVILATSGTV 953

Query: 1045 FLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIA-VERVLKMHEGRPHAGDM 1103
            F+S+ND  K  +  + K    +GF++V+TSGT   L   G   ++ VLK+HEGRPH  D 
Sbjct: 954  FVSMNDRDKTPMVPVVKDLQSLGFRVVATSGTREVLLENGCENIDLVLKIHEGRPHVIDW 1013

Query: 1104 VANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTVT 1163
            + N  IQ +V T SG+   Q DG ++RR  L YK+P+ITT++GA A   A++SL+S  + 
Sbjct: 1014 IKNDWIQFIVNTPSGEE-SQNDGRQIRRTALDYKLPIITTIAGAKATVAALKSLQSQPLE 1072

Query: 1164 MTALQDFF 1171
            + ALQD+ 
Sbjct: 1073 VKALQDYL 1080


>gi|307153024|ref|YP_003888408.1| carbamoyl-phosphate synthase large subunit [Cyanothece sp. PCC 7822]
 gi|306983252|gb|ADN15133.1| carbamoyl-phosphate synthase, large subunit [Cyanothece sp. PCC 7822]
          Length = 1082

 Score = 1523 bits (3943), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 745/1086 (68%), Positives = 883/1086 (81%), Gaps = 10/1086 (0%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            +R DL KILILG+GPIVIGQACEFDYSGTQACKAL+EEGYEV+LINSNPA+IMTDP +A+
Sbjct: 3    RRNDLHKILILGSGPIVIGQACEFDYSGTQACKALREEGYEVVLINSNPASIMTDPEMAN 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
            RTYI P+TPE+VE+VL KERPDA+LPTMGGQTALNLAVALA++GAL+KY VELIGAKL A
Sbjct: 63   RTYIEPLTPEMVEKVLAKERPDAILPTMGGQTALNLAVALAKNGALDKYNVELIGAKLPA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I+ AEDR LFK+AM  IGV   PSGI +TL+E  +IA +IG +PLIIRPAFTLGGTGGGI
Sbjct: 123  IEMAEDRLLFKEAMARIGVPVCPSGIASTLEEAKAIAVQIGSYPLIIRPAFTLGGTGGGI 182

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            +YN+EEFE + + GL  S  SQ+LVEKSLLGWKEYELEVMRDLADNVVIICSIEN+DPMG
Sbjct: 183  SYNQEEFEVMAQYGLDCSPVSQILVEKSLLGWKEYELEVMRDLADNVVIICSIENIDPMG 242

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQRLRDYS AIIREIGVE GGSN+QFAVNPVDG+V+VIEMN
Sbjct: 243  VHTGDSITVAPAQTLTDKEYQRLRDYSKAIIREIGVETGGSNIQFAVNPVDGDVIVIEMN 302

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRF 447
            PRVSRSSALASKATGFPIAK AAKL+VGY+LD+I NDITK+TPASFEP+IDYVVTK PRF
Sbjct: 303  PRVSRSSALASKATGFPIAKFAAKLAVGYTLDEIKNDITKQTPASFEPTIDYVVTKAPRF 362

Query: 448  AFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDWE 507
            AFEKFPG++P+LTTQMKSVGEAMA+GRTFQES QKALRSLE G  G+GC   + L     
Sbjct: 363  AFEKFPGAQPILTTQMKSVGEAMAIGRTFQESLQKALRSLEIGRFGFGCDKNETLP-SLS 421

Query: 508  QLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSVS 567
            Q++ +LR PNP+R+  +Y A+K GM V+EI EL+ ID WFL +  EL+D E+FL    + 
Sbjct: 422  QIRANLRTPNPERIFTVYQALKLGMTVEEIFELTAIDPWFLDKMHELVDTEKFLKQTPLK 481

Query: 568  NMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTPY 627
            N+T +    VK++GFSD+QIAFATK+ E EVR  R  LGV P YK VDTCAAEFEA TPY
Sbjct: 482  NITLEQMRFVKQQGFSDRQIAFATKTHEDEVRAVRKQLGVTPVYKLVDTCAAEFEAYTPY 541

Query: 628  MYSSY-DFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSN 686
             YS+Y + E E  PT K+KV+ILGGGPNRIGQGIEFDYCCCH +F+L + G+ETIM+NSN
Sbjct: 542  YYSTYEEGESEIRPTDKRKVMILGGGPNRIGQGIEFDYCCCHAAFALSAEGFETIMVNSN 601

Query: 687  PETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHR 746
            PETVSTDYDTSDRLYFEPLT EDVLN+I+ E PEG+IVQFGGQTPLKL++P+ +YLD   
Sbjct: 602  PETVSTDYDTSDRLYFEPLTKEDVLNIIEAENPEGVIVQFGGQTPLKLAVPLQKYLDSPD 661

Query: 747  LPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEIG 806
             P  +     +IWGTSPDSID AEDRERF  I+ EL+I QP  GIA+S  +ALA+AK IG
Sbjct: 662  CPVKT-----KIWGTSPDSIDIAEDRERFEKILWELNITQPPNGIARSYDEALAVAKRIG 716

Query: 807  YPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALAD 866
            YPVVVRPSYVLGGRAMEIV++D+ L  Y+  AV+V+P+ P+LIDK+L +AIE+DVD LAD
Sbjct: 717  YPVVVRPSYVLGGRAMEIVFSDQDLERYMTYAVQVEPDHPILIDKFLENAIEVDVDTLAD 776

Query: 867  SCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNC 926
            + G  +IGGIMEHIE+AGVHSGDSAC +P  T++ + L+TI +WT +LA+ L V GLMN 
Sbjct: 777  ATGKSIIGGIMEHIEEAGVHSGDSACSVPFTTLTPTVLETIRNWTSQLAQVLKVVGLMNI 836

Query: 927  QYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPKH 986
            QYA+     VY+LEANPRASRTVP+VSKA G PLAK A+LVMSGK+L  LG T+E IP H
Sbjct: 837  QYAVQGE-QVYILEANPRASRTVPYVSKATGRPLAKIASLVMSGKTLESLGITQEFIPTH 895

Query: 987  VSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVFL 1046
            ++VKEAVLPFEKF G D LLGPEMRSTGEVMGID  F  AFAKA++AAG +L  SGTVF+
Sbjct: 896  IAVKEAVLPFEKFPGADTLLGPEMRSTGEVMGIDTDFGKAFAKAEMAAGVRLATSGTVFV 955

Query: 1047 SLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGI-AVERVLKMHEGRPHAGDMVA 1105
            S+ND  K     + K  L +GFK+V+TSGT   LE  GI  VE VLK+HEGRPH  D + 
Sbjct: 956  SMNDRDKQATVPVVKDLLQLGFKVVATSGTQKILEENGIEGVEVVLKLHEGRPHVIDWIK 1015

Query: 1106 NGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTVTMT 1165
            N  IQ ++ T SG+   Q DG  +RR  L YK+P+ITT++GA A   A+RSL+S T+ + 
Sbjct: 1016 NNWIQFIINTPSGEE-SQNDGRSIRRTALDYKLPIITTIAGAKATVAALRSLQSETLDVK 1074

Query: 1166 ALQDFF 1171
            A+QD+ 
Sbjct: 1075 AIQDYL 1080


>gi|434406936|ref|YP_007149821.1| carbamoyl-phosphate synthase large subunit [Cylindrospermum stagnale
            PCC 7417]
 gi|428261191|gb|AFZ27141.1| carbamoyl-phosphate synthase large subunit [Cylindrospermum stagnale
            PCC 7417]
          Length = 1086

 Score = 1522 bits (3941), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 728/1088 (66%), Positives = 893/1088 (82%), Gaps = 13/1088 (1%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            +R DLRKIL+LG+GPIVIGQACEFDYSGTQACKAL+EEGYEV+L+NSNPATIMTDP  AD
Sbjct: 3    RRDDLRKILLLGSGPIVIGQACEFDYSGTQACKALREEGYEVVLVNSNPATIMTDPETAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
            RTYI P+ PELVE+V+ KERPDALLPTMGGQTALNLAVALA++G L+KY VELIGAKL A
Sbjct: 63   RTYIEPLIPELVEKVIAKERPDALLPTMGGQTALNLAVALAKNGVLDKYNVELIGAKLPA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I+KAEDR LF +AM  IGV   PSG  +TL+E  +IA +IG +PLIIRPAFT+GGTGGGI
Sbjct: 123  IEKAEDRKLFNEAMAKIGVAVCPSGTASTLEESKAIARQIGTYPLIIRPAFTMGGTGGGI 182

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEFE + + G+ AS  SQ+L+++SLLGWKEYELEVMRDLADNVVIICSIEN+DPMG
Sbjct: 183  AYNQEEFEEMAQVGIDASPVSQILIDQSLLGWKEYELEVMRDLADNVVIICSIENIDPMG 242

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            +HTGDSITVAPAQTLTDKEYQRLRD +I IIREIGVE GGSN+QFAVNPV+G+V+VIEMN
Sbjct: 243  IHTGDSITVAPAQTLTDKEYQRLRDMAIKIIREIGVETGGSNIQFAVNPVNGDVVVIEMN 302

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRF 447
            PRVSRSSAL+SKATGFPIAK+AAKL+VGY+L+++ NDITK+TPASFEP+IDYVVTKIPRF
Sbjct: 303  PRVSRSSALSSKATGFPIAKIAAKLAVGYTLNELQNDITKQTPASFEPTIDYVVTKIPRF 362

Query: 448  AFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDWE 507
            AFEKFPGSE +LTTQMKSVGEAMA+GRTF ESFQKALRSLE G +GWGC   ++L    E
Sbjct: 363  AFEKFPGSEAVLTTQMKSVGEAMAIGRTFNESFQKALRSLETGRAGWGCDKAEKLP-SGE 421

Query: 508  QLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSVS 567
            Q++  LR PNPDR+ A+  AM+ G+ ++EI+EL+ ID+WFL + + L++VE+FL    + 
Sbjct: 422  QIRAQLRTPNPDRIFAVRHAMQSGISIEEIYELTAIDRWFLDKLQHLLEVEKFLKRTPLK 481

Query: 568  NMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTPY 627
             +TK+  Y+VKR G+SD+QIA+ATK+TE EVR  R  L VIP YK VDTCAAEFEA TPY
Sbjct: 482  QLTKEQMYDVKRDGYSDRQIAYATKTTEDEVRAYRKQLEVIPVYKTVDTCAAEFEAFTPY 541

Query: 628  MYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSNP 687
             YS+Y+ E E  PT K KV+ILGGGPNRIGQGIEFDYCCCH +++L+ AGYETIM+NSNP
Sbjct: 542  YYSTYEAETEVLPTTKPKVMILGGGPNRIGQGIEFDYCCCHAAYALKEAGYETIMVNSNP 601

Query: 688  ETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHRL 747
            ETVSTDYDTSDRLYFEPLT EDVLN+I+ E P GIIVQFGGQTPLKL++P+ ++L   +L
Sbjct: 602  ETVSTDYDTSDRLYFEPLTKEDVLNIIEAENPVGIIVQFGGQTPLKLAIPLQEFLTTQKL 661

Query: 748  PSASGDGL-VRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEIG 806
                  GL  +IWGTSPDSID AE+RERF  I+K+L+I QP  G+A+S  D+L +AK IG
Sbjct: 662  ------GLQTQIWGTSPDSIDMAENRERFEKILKQLNISQPPNGMARSYEDSLIVAKRIG 715

Query: 807  YPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALAD 866
            YPVVVRPSYVLGGRAMEIVY+D  L  Y+  AV V+P+ P+LIDK+L +AIE+DVDA+AD
Sbjct: 716  YPVVVRPSYVLGGRAMEIVYSDAELERYMTFAVLVEPDHPILIDKFLENAIEVDVDAIAD 775

Query: 867  SCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNC 926
              G VVIGGIMEHIEQAG+HSGDSAC +P+ ++  + L+ I +WT++LA+ L+V GLMN 
Sbjct: 776  HTGRVVIGGIMEHIEQAGIHSGDSACSLPSISLPPAVLNQIRTWTVQLAQSLSVVGLMNI 835

Query: 927  QYAI----TTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEV 982
            Q+A+    + S  VY+LEANPRASRTVPFVSKA G  LAK A+LVMSGK+L +L FT+EV
Sbjct: 836  QFAVIGASSYSPQVYILEANPRASRTVPFVSKATGVQLAKLASLVMSGKTLEELNFTEEV 895

Query: 983  IPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSG 1042
            IP H++VKEAVLPF KF G D +LGPEMRSTGEVMGID  F  AFAKA++ AG+ LPL G
Sbjct: 896  IPTHIAVKEAVLPFNKFPGTDTILGPEMRSTGEVMGIDSDFGRAFAKAELGAGELLPLQG 955

Query: 1043 TVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGD 1102
            TVF+S++D  K     + + F+D+GF +++T GT   L+ +G+ +E VLK+HEGRP+  D
Sbjct: 956  TVFVSMSDRDKTAAVDVVREFIDLGFTVMATVGTRLVLQEQGLNIESVLKLHEGRPNVID 1015

Query: 1103 MVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTV 1162
             + N +IQ+++ T SG+   Q D   +RR  LAYK+P+ITT++GA A   AIRSL+S T+
Sbjct: 1016 AIKNQKIQLIINTPSGEEA-QTDARLIRRTALAYKLPIITTIAGAKATVAAIRSLQSTTL 1074

Query: 1163 TMTALQDF 1170
             + A+QD+
Sbjct: 1075 DVKAIQDY 1082


>gi|428221427|ref|YP_007105597.1| carbamoyl-phosphate synthase large subunit [Synechococcus sp. PCC
            7502]
 gi|427994767|gb|AFY73462.1| carbamoyl-phosphate synthase, large subunit [Synechococcus sp. PCC
            7502]
          Length = 1085

 Score = 1522 bits (3940), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 737/1090 (67%), Positives = 894/1090 (82%), Gaps = 15/1090 (1%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            +R D+ KIL++GAGPIVIGQACEFDYSGTQACKAL++EGY VIL+NSNPATIMTDP  AD
Sbjct: 3    RRNDIHKILLIGAGPIVIGQACEFDYSGTQACKALRDEGYYVILVNSNPATIMTDPVTAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
            RTYI P+TPE+V Q++EKERPDALLPTMGGQTALN AVALA++G LEKYGVELIGAKL A
Sbjct: 63   RTYIEPITPEIVAQIIEKERPDALLPTMGGQTALNTAVALAKNGTLEKYGVELIGAKLPA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I+ AEDR LFK+AM  +GV   PSG+G+T+ E   IA EIG +PLIIRPAFT+GGTGGGI
Sbjct: 123  IEMAEDRKLFKEAMARVGVAVCPSGLGHTMAEAREIAAEIGTYPLIIRPAFTMGGTGGGI 182

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEFE I  +GL AS  SQ+L+EKSL+GWKEYELEVMRDLADNVVIICSIEN+D MG
Sbjct: 183  AYNQEEFEMIAASGLEASPNSQILIEKSLIGWKEYELEVMRDLADNVVIICSIENIDAMG 242

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            +HTGDSITVAPAQTLTDKEYQRLRDYSI IIREIGVE GGSN+QFA+NPV+GEV+VIEMN
Sbjct: 243  IHTGDSITVAPAQTLTDKEYQRLRDYSIKIIREIGVETGGSNIQFAINPVNGEVVVIEMN 302

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRF 447
            PRVSRSSALASKATGFPIAK AAKL+VGY+LD+IPNDITKKTPASFEP+IDYVVTKIPRF
Sbjct: 303  PRVSRSSALASKATGFPIAKFAAKLAVGYTLDEIPNDITKKTPASFEPTIDYVVTKIPRF 362

Query: 448  AFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDWE 507
            AFEKFPGS+ +LTTQMKSVGEAMA+GRTFQESFQKALRSLE G  G+G  +  E+    E
Sbjct: 363  AFEKFPGSQAVLTTQMKSVGEAMAIGRTFQESFQKALRSLETGRFGFG-GDKDEVIPTLE 421

Query: 508  QLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSVS 567
            Q+K SLR PNPDR+ ++      G+ V  I  L+ ID WFL + +EL D+E  L  +S+S
Sbjct: 422  QIKTSLRTPNPDRIFSVRHGFLSGLSVGAIATLTHIDPWFLQKLRELTDIELALKDRSLS 481

Query: 568  NMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTPY 627
            ++  ++  EVKR GFSD+QIA+ T STE EVR  R SLG+IPSYK VDTCAAEFEA TPY
Sbjct: 482  DIPVEELTEVKRMGFSDRQIAYLTHSTEDEVRTYRKSLGIIPSYKTVDTCAAEFEALTPY 541

Query: 628  MYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSNP 687
             YS+Y+ E E  P++K+KV+ILGGGPNRIGQGIEFDYCCCH S+SL++AG+ETIM+NSNP
Sbjct: 542  HYSTYEEESEVLPSEKRKVMILGGGPNRIGQGIEFDYCCCHASYSLRAAGFETIMVNSNP 601

Query: 688  ETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHRL 747
            ETVSTDYDTSDRLYFEPLT EDVLN+I+ E+PEGII+QFGGQTPLKLS+ + +YL+EH+ 
Sbjct: 602  ETVSTDYDTSDRLYFEPLTREDVLNIIEAEQPEGIIIQFGGQTPLKLSVSLQKYLNEHQ- 660

Query: 748  PSASGDGL-VRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEIG 806
                 D L  +IWGTSPDSID AEDRERF AI +EL I+QP  G+A+S A+AL +A+ +G
Sbjct: 661  -----DTLKTKIWGTSPDSIDTAEDRERFEAICQELGIKQPNNGLARSYAEALEVAQRVG 715

Query: 807  YPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALAD 866
            YPVVVRPSYVLGGR ME+VY+D  L  Y+  A+ ++PE P+LID++L  AIE+DVDA++D
Sbjct: 716  YPVVVRPSYVLGGRGMEVVYSDAALEEYMHKAILIEPEHPILIDQFLEGAIEVDVDAISD 775

Query: 867  SCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNC 926
              G VVIGGIMEHIE+AG+HSGDSAC IPT ++S   L TI  WT+KLAK L V GLMN 
Sbjct: 776  PTGQVVIGGIMEHIEEAGIHSGDSACAIPTFSLSEDVLTTIREWTVKLAKSLKVVGLMNI 835

Query: 927  QYAITTSGD------VYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTK 980
            Q+A+  + +      V++LEANPRASRTVP+VSKA G PL  YA+ +MSGK+L++L FTK
Sbjct: 836  QFAVQVNPNNPKQEQVFILEANPRASRTVPYVSKATGVPLVSYASQIMSGKTLDELRFTK 895

Query: 981  EVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPL 1040
            EVIP H+S+KEAVLPF KF G D++LGPEMRSTGEVMGID  F  AFAKAQIAAG+++PL
Sbjct: 896  EVIPTHISIKEAVLPFAKFAGTDIILGPEMRSTGEVMGIDTEFGKAFAKAQIAAGERVPL 955

Query: 1041 SGTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHA 1100
            +GTVF+S+ND  K  +  +A+ F+++GFKI++T GT   L  KGI  E VLK+HEGRP+ 
Sbjct: 956  AGTVFISVNDRDKAGVTAVAEGFIELGFKIIATEGTHKILLRKGIDSELVLKVHEGRPNI 1015

Query: 1101 GDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSN 1160
             D++ N Q+Q+++ + SG+    +DG  +RR  L+YK+PVITT++GA A   AIRSL++ 
Sbjct: 1016 SDVIKNSQVQIIINSPSGEDA-SLDGKLIRRSALSYKIPVITTLAGAKAAIAAIRSLQTQ 1074

Query: 1161 TVTMTALQDF 1170
             + + ALQD+
Sbjct: 1075 PLQVQALQDY 1084


>gi|257058535|ref|YP_003136423.1| carbamoyl phosphate synthase large subunit [Cyanothece sp. PCC 8802]
 gi|256588701|gb|ACU99587.1| carbamoyl-phosphate synthase, large subunit [Cyanothece sp. PCC 8802]
          Length = 1081

 Score = 1521 bits (3938), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 744/1088 (68%), Positives = 884/1088 (81%), Gaps = 10/1088 (0%)

Query: 86   LGKRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGL 145
            + +R DL+KILILGAGPIVIGQACEFDYSGTQACKAL+EEGYEV+L+NSNPA+IMTDP +
Sbjct: 1    MPRRNDLKKILILGAGPIVIGQACEFDYSGTQACKALREEGYEVVLVNSNPASIMTDPEM 60

Query: 146  ADRTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKL 205
            A+RTYI P+TP++V +V+ KERPDALLPTMGGQTALN+AVALA++G L++Y VELIGAKL
Sbjct: 61   ANRTYIEPLTPDMVAKVIAKERPDALLPTMGGQTALNVAVALAKNGVLDEYNVELIGAKL 120

Query: 206  DAIKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGG 265
             AI+KAEDR+LFK+AM  IGV   PSGI NTL E   IA +IG +PLIIRPAFTLGGTGG
Sbjct: 121  PAIEKAEDRNLFKEAMAKIGVPVCPSGIANTLKEAQMIAEQIGSYPLIIRPAFTLGGTGG 180

Query: 266  GIAYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDP 325
            GIAYN+EEFE + + G+ +S  SQ+LVEKSLLGWKEYELEVMRDLADNVVIICSIEN DP
Sbjct: 181  GIAYNQEEFEEMAQFGIDSSPVSQILVEKSLLGWKEYELEVMRDLADNVVIICSIENFDP 240

Query: 326  MGVHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIE 385
            MGVHTGDSITVAPAQTLTDKEYQRLRDYS AIIREIGVE GGSN+QF+VNPV+G+V+VIE
Sbjct: 241  MGVHTGDSITVAPAQTLTDKEYQRLRDYSQAIIREIGVETGGSNIQFSVNPVNGDVIVIE 300

Query: 386  MNPRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIP 445
            MNPRVSRSSALASKATGFPIAKMAAKL+VGY+L++I NDITK+TPASFEP+IDYVVTKIP
Sbjct: 301  MNPRVSRSSALASKATGFPIAKMAAKLAVGYTLNEIKNDITKQTPASFEPTIDYVVTKIP 360

Query: 446  RFAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWD 505
            RFAFEKFPGS+P+LTTQMKSVGEAMA+GRTF ESFQKALRSLE G  G+GC   KE    
Sbjct: 361  RFAFEKFPGSQPILTTQMKSVGEAMAIGRTFCESFQKALRSLETGRYGFGCDR-KETLPS 419

Query: 506  WEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQS 565
              Q+K SLR PNP+R+ +IY AM+ GM V+EI+EL+ ID WFL + +E+I  E+FL    
Sbjct: 420  LSQVKASLRTPNPERVYSIYHAMRLGMTVEEIYELTGIDIWFLDKLQEIIQSEKFLKQTP 479

Query: 566  VSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANT 625
            ++ ++      VK++GFSD+QIAFATK+TE EVR  R SLG+IP YK VDTCAAEFEA T
Sbjct: 480  LNQISLQQMRFVKQQGFSDRQIAFATKTTEDEVRSYRKSLGIIPVYKVVDTCAAEFEAFT 539

Query: 626  PYMYSSYD-FECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMN 684
            PY YS+Y+  E E  PT K KV+ILGGGPNRIGQGIEFDYCCCH +FSL  AGYETIM+N
Sbjct: 540  PYFYSTYEPSETEVTPTDKPKVMILGGGPNRIGQGIEFDYCCCHAAFSLSDAGYETIMVN 599

Query: 685  SNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDE 744
            SNPETVSTDYDTSDRLYFEPLT EDVLN+I+ E P G+I+QFGGQTPLKL++P+  YLD 
Sbjct: 600  SNPETVSTDYDTSDRLYFEPLTKEDVLNIIETENPVGVIIQFGGQTPLKLAVPLQTYLDS 659

Query: 745  HRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKE 804
               P  +     +IWGTSPDSID AEDRERF  I+ +L I+QP  GI++S  +++A+A  
Sbjct: 660  PNCPVQT-----KIWGTSPDSIDTAEDRERFEKILHDLEIKQPANGISRSYEESVAVASR 714

Query: 805  IGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDAL 864
            IGYPVVVRPSYVLGGRAMEIVY+DE L  Y+  AV+V+P+ P+LIDK+L +AIE+DVDAL
Sbjct: 715  IGYPVVVRPSYVLGGRAMEIVYSDEELERYMIYAVQVEPDHPILIDKFLENAIEVDVDAL 774

Query: 865  ADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLM 924
             D  G VVIGGIMEHIEQAGVHSGDSAC +P  T+S   ++TI +WT  LA  L V GLM
Sbjct: 775  CDMTGKVVIGGIMEHIEQAGVHSGDSACSLPFTTLSPHVINTIRNWTTHLANSLQVIGLM 834

Query: 925  NCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIP 984
            N QYA+     VY+LEANPRASRTVP+VSKA G PLAK A+LVMSGK+L +LG T+E+IP
Sbjct: 835  NIQYAVQGE-QVYILEANPRASRTVPYVSKATGRPLAKIASLVMSGKTLEELGVTEELIP 893

Query: 985  KHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTV 1044
             H++VKEAVLPF+KF G D LLGPEMRSTGEVMGID  F  AFAKA+IAAG  L  +GTV
Sbjct: 894  HHIAVKEAVLPFQKFPGADTLLGPEMRSTGEVMGIDSDFGKAFAKAEIAAGVDLATTGTV 953

Query: 1045 FLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGI-AVERVLKMHEGRPHAGDM 1103
            F+S++D  K     + K  + +GFK+V+TSGT   LE  GI  VE VLK+HEGRPH  D 
Sbjct: 954  FVSMSDRDKILTVPVVKDLVALGFKVVATSGTQKVLEDNGIEGVEVVLKLHEGRPHVIDW 1013

Query: 1104 VANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTVT 1163
            + N QIQ ++ T SG+   Q+DG  +RR  L YK+P+ITT++GA A   AIRSL++  + 
Sbjct: 1014 IKNKQIQFIINTPSGEE-SQVDGRLIRRTALDYKLPIITTIAGAKATVAAIRSLQTQPLE 1072

Query: 1164 MTALQDFF 1171
            + ALQD+ 
Sbjct: 1073 VKALQDYL 1080


>gi|218245501|ref|YP_002370872.1| carbamoyl phosphate synthase large subunit [Cyanothece sp. PCC 8801]
 gi|218165979|gb|ACK64716.1| carbamoyl-phosphate synthase, large subunit [Cyanothece sp. PCC 8801]
          Length = 1081

 Score = 1521 bits (3937), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 744/1088 (68%), Positives = 883/1088 (81%), Gaps = 10/1088 (0%)

Query: 86   LGKRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGL 145
            + +R DL+KILILGAGPIVIGQACEFDYSGTQACKAL+EEGYEV+L+NSNPA+IMTDP +
Sbjct: 1    MPRRNDLKKILILGAGPIVIGQACEFDYSGTQACKALREEGYEVVLVNSNPASIMTDPEM 60

Query: 146  ADRTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKL 205
            A+RTYI P+TP++V +V+ KERPDALLPTMGGQTALN+AVALA++G L++Y VELIGAKL
Sbjct: 61   ANRTYIEPLTPDMVAKVIAKERPDALLPTMGGQTALNVAVALAKNGVLDEYNVELIGAKL 120

Query: 206  DAIKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGG 265
             AI+KAEDR+LFK+AM  IGV   PSGI NTL E   IA +IG +PLIIRPAFTLGGTGG
Sbjct: 121  PAIEKAEDRNLFKEAMAKIGVPVCPSGIANTLKEAQMIAEQIGSYPLIIRPAFTLGGTGG 180

Query: 266  GIAYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDP 325
            GIAYN+EEFE + + G+ +S  SQ+LVEKSLLGWKEYELEVMRDLADNVVIICSIEN DP
Sbjct: 181  GIAYNQEEFEEMAQFGIDSSPVSQILVEKSLLGWKEYELEVMRDLADNVVIICSIENFDP 240

Query: 326  MGVHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIE 385
            MGVHTGDSITVAPAQTLTDKEYQRLRDYS AIIREIGVE GGSN+QF+VNPV+G+V+VIE
Sbjct: 241  MGVHTGDSITVAPAQTLTDKEYQRLRDYSQAIIREIGVETGGSNIQFSVNPVNGDVIVIE 300

Query: 386  MNPRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIP 445
            MNPRVSRSSALASKATGFPIAKMAAKL+VGY+L++I NDITK+TPASFEP+IDYVVTKIP
Sbjct: 301  MNPRVSRSSALASKATGFPIAKMAAKLAVGYTLNEIKNDITKQTPASFEPTIDYVVTKIP 360

Query: 446  RFAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWD 505
            RFAFEKFPGS+P+LTTQMKSVGEAMA+GRTF ESFQKALRSLE G  G+GC   KE    
Sbjct: 361  RFAFEKFPGSQPILTTQMKSVGEAMAIGRTFCESFQKALRSLETGRYGFGCDR-KETLPS 419

Query: 506  WEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQS 565
              Q+K SLR PNP+R+ +IY AM+ GM V+EI+EL+ ID WFL + +E+I  E+FL    
Sbjct: 420  LSQVKASLRTPNPERVYSIYHAMRLGMTVEEIYELTGIDIWFLDKLQEIIQSEKFLKQTP 479

Query: 566  VSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANT 625
            ++ ++      VK++GFSD+QIAFATK+TE EVR  R SLG+IP YK VDTCAAEFEA T
Sbjct: 480  LNQISLQQMRFVKQQGFSDRQIAFATKTTEDEVRSYRKSLGIIPVYKVVDTCAAEFEAFT 539

Query: 626  PYMYSSYD-FECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMN 684
            PY YS+Y+  E E  PT K KV+ILGGGPNRIGQGIEFDYCCCH +FSL  AGYETIM+N
Sbjct: 540  PYFYSTYEPSETEVTPTDKPKVMILGGGPNRIGQGIEFDYCCCHAAFSLSDAGYETIMVN 599

Query: 685  SNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDE 744
            SNPETVSTDYDTSDRLYFEPLT EDVLN+I+ E P G+I+QFGGQTPLKL++P+  YLD 
Sbjct: 600  SNPETVSTDYDTSDRLYFEPLTKEDVLNIIETENPVGVIIQFGGQTPLKLAVPLQTYLDS 659

Query: 745  HRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKE 804
               P  +     +IWGTSPDSID AEDRERF  I+ +L I+QP  GI++S  +++A+A  
Sbjct: 660  PNCPVQT-----KIWGTSPDSIDTAEDRERFEKILHDLEIKQPANGISRSYEESVAVASR 714

Query: 805  IGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDAL 864
            IGYPVVVRPSYVLGGRAMEIVY+DE L  Y+  AV+V+P+ P+LIDK+L +AIE+DVDAL
Sbjct: 715  IGYPVVVRPSYVLGGRAMEIVYSDEELERYMIYAVQVEPDHPILIDKFLENAIEVDVDAL 774

Query: 865  ADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLM 924
             D  G VVIGGIMEHIEQAGVHSGDSAC +P  T+S   ++TI +WT  LA  L V GLM
Sbjct: 775  CDMTGKVVIGGIMEHIEQAGVHSGDSACSLPFTTLSPHVINTIRNWTTHLANSLQVIGLM 834

Query: 925  NCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIP 984
            N QYA+     VY+LEANPRASRTVP+VSKA G PLAK A+LVMSGK+L +LG T E+IP
Sbjct: 835  NIQYAVQGE-QVYILEANPRASRTVPYVSKATGRPLAKIASLVMSGKTLEELGVTDELIP 893

Query: 985  KHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTV 1044
             H++VKEAVLPF+KF G D LLGPEMRSTGEVMGID  F  AFAKA+IAAG  L  +GTV
Sbjct: 894  HHIAVKEAVLPFQKFPGADTLLGPEMRSTGEVMGIDSDFGKAFAKAEIAAGVDLATTGTV 953

Query: 1045 FLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGI-AVERVLKMHEGRPHAGDM 1103
            F+S++D  K     + K  + +GFK+V+TSGT   LE  GI  VE VLK+HEGRPH  D 
Sbjct: 954  FVSMSDRDKILTVPVVKDLVSLGFKVVATSGTQKVLEDNGIEGVEVVLKLHEGRPHVIDW 1013

Query: 1104 VANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTVT 1163
            + N QIQ ++ T SG+   Q+DG  +RR  L YK+P+ITT++GA A   AIRSL++  + 
Sbjct: 1014 IKNKQIQFIINTPSGEE-SQVDGRLIRRTALDYKLPIITTIAGAKATVAAIRSLQTQPLE 1072

Query: 1164 MTALQDFF 1171
            + ALQD+ 
Sbjct: 1073 VKALQDYL 1080


>gi|425472266|ref|ZP_18851117.1| carbamoyl phosphate synthase, large subunit [Microcystis aeruginosa
            PCC 9701]
 gi|389881692|emb|CCI37772.1| carbamoyl phosphate synthase, large subunit [Microcystis aeruginosa
            PCC 9701]
          Length = 1081

 Score = 1521 bits (3937), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 735/1088 (67%), Positives = 891/1088 (81%), Gaps = 10/1088 (0%)

Query: 86   LGKRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGL 145
            + +R DL+KILILGAGPIVIGQACEFDYSGTQACKAL+EEGYEVIL+NSNPA+IMTDP +
Sbjct: 1    MPRRDDLQKILILGAGPIVIGQACEFDYSGTQACKALREEGYEVILVNSNPASIMTDPEM 60

Query: 146  ADRTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKL 205
            ADRTYI P+ PE+VE+++ KERPDA+LPTMGGQTALN AVALA+SG LEKY VELIGAKL
Sbjct: 61   ADRTYIEPILPEIVEKIIAKERPDAILPTMGGQTALNTAVALAKSGVLEKYNVELIGAKL 120

Query: 206  DAIKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGG 265
             AI+KAEDR+LFK+AM+ IGV   PSGI N L+E  +I ++IG +PLIIRPAFTLGGTGG
Sbjct: 121  PAIEKAEDRELFKKAMEKIGVPVCPSGIANNLEEAKAIGHQIGSYPLIIRPAFTLGGTGG 180

Query: 266  GIAYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDP 325
            GIAYN+EEFE + + GL  S TSQ+LVEKSL+GWKEYELEVMRDLADNVVIICSIEN DP
Sbjct: 181  GIAYNQEEFEPMAQYGLDCSPTSQILVEKSLIGWKEYELEVMRDLADNVVIICSIENFDP 240

Query: 326  MGVHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIE 385
            MGVHTGDSITVAPAQTLTDKEYQRLRDYS AIIREIGVE GGSN+QF+VNP +G+V+VIE
Sbjct: 241  MGVHTGDSITVAPAQTLTDKEYQRLRDYSKAIIREIGVETGGSNIQFSVNPTNGDVIVIE 300

Query: 386  MNPRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIP 445
            MNPRVSRSSALASKATGFPIAK AAKL+VGY+LD+IPNDITKKTPASFEP+IDYVVTKIP
Sbjct: 301  MNPRVSRSSALASKATGFPIAKFAAKLAVGYTLDEIPNDITKKTPASFEPTIDYVVTKIP 360

Query: 446  RFAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWD 505
            RFAFEKFPGS+P+LTTQMKSVGEAMA+GRTFQESFQKALRSLE G  G+GC  V+ L   
Sbjct: 361  RFAFEKFPGSQPILTTQMKSVGEAMAIGRTFQESFQKALRSLETGRFGFGCDKVETLP-P 419

Query: 506  WEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQS 565
              +++ SLR PNP+R+ +IY A K GM  +EIHEL+ ID WFL +  +L++ E+FL    
Sbjct: 420  LSEVRASLRTPNPERVYSIYHAFKLGMNGEEIHELTGIDPWFLDKLADLMETEKFLKRTP 479

Query: 566  VSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANT 625
            + +++++D + +K++GFSD+QIAFAT ++E EVR  R  LG++P YK VDTCAAEFEA T
Sbjct: 480  LKSLSQEDLFAIKQQGFSDRQIAFATNTSEDEVRSYRKGLGIVPVYKMVDTCAAEFEALT 539

Query: 626  PYMYSSYD-FECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMN 684
            PY YS+Y+  E E  P+ K+KV+ILGGGPNRIGQGIEFDYCCCH +FSL +AG+ETIM+N
Sbjct: 540  PYYYSTYERVESEVLPSDKRKVMILGGGPNRIGQGIEFDYCCCHAAFSLSNAGFETIMVN 599

Query: 685  SNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDE 744
            SNPETVSTDYDTSDRLYFEPLT EDVLN+I+ E+PEG+I+QFGGQTPLKL++P+ +YL+ 
Sbjct: 600  SNPETVSTDYDTSDRLYFEPLTKEDVLNIIEAEQPEGLIIQFGGQTPLKLAVPLQKYLES 659

Query: 745  HRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKE 804
               P  +     +IWGTSPDSIDAAEDRERF  I+++L I QP  GIA+S  ++ A+AK 
Sbjct: 660  PNCPVNT-----KIWGTSPDSIDAAEDRERFEKILRQLDIRQPPNGIARSFQESQAVAKR 714

Query: 805  IGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDAL 864
            IGYPVVVRPSYVLGGRAMEIVY+D  L  Y++ AV+++P+ P+LIDK+L +AIE+DVDAL
Sbjct: 715  IGYPVVVRPSYVLGGRAMEIVYSDSELERYMKYAVQIEPDHPILIDKFLENAIEVDVDAL 774

Query: 865  ADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLM 924
            +D+ G VVIGG+MEHIEQAGVHSGDSAC IP  ++S+  L TI  WT++LAK L V GLM
Sbjct: 775  SDATGTVVIGGLMEHIEQAGVHSGDSACSIPHTSLSAPVLTTIRQWTVELAKALKVIGLM 834

Query: 925  NCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIP 984
            N QYA+     VY+LEANPRASRTVP+VSKA G PLAK A+LVMSGK+L +LG   E IP
Sbjct: 835  NIQYAVQGE-TVYILEANPRASRTVPYVSKATGVPLAKVASLVMSGKTLAELGIISEAIP 893

Query: 985  KHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTV 1044
            +H++VKEAVLPF+KF G D LLGPEMRSTGEVMGID  F  AFAKA++AAG  L  SGTV
Sbjct: 894  RHIAVKEAVLPFQKFPGADTLLGPEMRSTGEVMGIDSDFGKAFAKAEMAAGVILATSGTV 953

Query: 1045 FLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIA-VERVLKMHEGRPHAGDM 1103
            F+S+N+  K  +  + K    +GF++V+TSGT   L   G   ++ VLK+HEGRPH  D 
Sbjct: 954  FVSMNNRDKTPMVPVVKDLQSLGFRVVATSGTREVLLENGCENIDLVLKIHEGRPHVIDW 1013

Query: 1104 VANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTVT 1163
            + N  IQ +V T SG+   Q DG ++RR  L YK+P+ITT++GA A   A++SL+S  + 
Sbjct: 1014 IKNDWIQFIVNTPSGEE-SQNDGRQIRRTALDYKLPIITTIAGAKATVAALKSLQSQPLE 1072

Query: 1164 MTALQDFF 1171
            + ALQD+ 
Sbjct: 1073 VKALQDYL 1080


>gi|434398764|ref|YP_007132768.1| carbamoyl-phosphate synthase large subunit [Stanieria cyanosphaera
            PCC 7437]
 gi|428269861|gb|AFZ35802.1| carbamoyl-phosphate synthase large subunit [Stanieria cyanosphaera
            PCC 7437]
          Length = 1086

 Score = 1519 bits (3934), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 739/1088 (67%), Positives = 889/1088 (81%), Gaps = 8/1088 (0%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            +R DL KIL+LG+GPIVIGQACEFDYSGTQACKAL+EEGYEV+L+NSNPA+IMTDP +A+
Sbjct: 3    RRDDLHKILLLGSGPIVIGQACEFDYSGTQACKALREEGYEVVLVNSNPASIMTDPEMAN 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
            RTYI P+TPE+VE+V+ KERPDALLPTMGGQTALN+AVALA++G L++Y VELIGAKL A
Sbjct: 63   RTYIEPLTPEMVEKVIAKERPDALLPTMGGQTALNVAVALAKNGVLDQYNVELIGAKLPA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I+KAEDR LFK+AM  IGV   PSGI N ++E   IA EIG +PLIIRPAFTLGGTGGGI
Sbjct: 123  IEKAEDRLLFKEAMAKIGVPVCPSGIANNINEAKQIALEIGSYPLIIRPAFTLGGTGGGI 182

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EE+E + + G+ AS  SQ+LVEKSLLGWKEYELEVMRDLADNVVIICSIEN+DPMG
Sbjct: 183  AYNQEEYEEMAQFGIDASPVSQILVEKSLLGWKEYELEVMRDLADNVVIICSIENIDPMG 242

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQRLRDYS AIIREIGVE GGSN+QFAVNPV+G+V+VIEMN
Sbjct: 243  VHTGDSITVAPAQTLTDKEYQRLRDYSKAIIREIGVETGGSNIQFAVNPVNGDVIVIEMN 302

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRF 447
            PRVSRSSALASKATGF IAK AAKL+VGY+LD+IPNDIT+KTPASFEP+IDYVVTKIPRF
Sbjct: 303  PRVSRSSALASKATGFAIAKFAAKLAVGYTLDEIPNDITQKTPASFEPTIDYVVTKIPRF 362

Query: 448  AFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDWE 507
            AFEKFPG+EP+LTTQMKSVGEAMA+GRTF ESFQKALRSLE    G+GC   + L     
Sbjct: 363  AFEKFPGTEPILTTQMKSVGEAMAIGRTFCESFQKALRSLETDRYGFGCDRQETLP-SIP 421

Query: 508  QLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSVS 567
            Q++  LR PNP+R+ ++Y A++ GM  +EIHEL+ ID WFL + +EL++ E+FL   S+ 
Sbjct: 422  QVRSHLRTPNPERIFSVYHALRIGMTPEEIHELTAIDLWFLDKMQELVETEKFLKCTSLE 481

Query: 568  NMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTPY 627
             +T      VK++GFSD+QIAFATK+TE EVR+ R  LG+IP YK VDTCAAEFEA TPY
Sbjct: 482  QITAQQMRSVKQQGFSDRQIAFATKTTEDEVRDYRKKLGIIPVYKLVDTCAAEFEAFTPY 541

Query: 628  MYSSY-DFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSN 686
             YS+Y + E E  P+ K+KV+ILGGGPNRIGQGIEFDYCCCH +FSL  AG+ETIM+NSN
Sbjct: 542  YYSTYEEGESEITPSDKRKVMILGGGPNRIGQGIEFDYCCCHAAFSLSKAGFETIMVNSN 601

Query: 687  PETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHR 746
            PETVSTDYDTSDRLYFEPLT EDVLN+I+ E PEGII+QFGGQTPLKL++P+  YL    
Sbjct: 602  PETVSTDYDTSDRLYFEPLTKEDVLNIIEAEHPEGIIIQFGGQTPLKLAVPLKNYL--QS 659

Query: 747  LPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEIG 806
            L    G    +IWGTSPDSID AEDRE+F  I++EL I+QP  G A+S  ++L+ A+ IG
Sbjct: 660  LADKPGKA-TKIWGTSPDSIDTAEDREKFEKILRELDIKQPPNGTARSYQESLSAARRIG 718

Query: 807  YPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALAD 866
            YPVVVRPSYVLGGRAMEIVY+D  L  Y++ AV+V+P+ P+LIDK+L +AIE+DVDAL D
Sbjct: 719  YPVVVRPSYVLGGRAMEIVYSDSELERYMKYAVQVEPDHPILIDKFLENAIEVDVDALCD 778

Query: 867  SCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNC 926
            + G V+IGGIMEHIEQAG+HSGDSAC IP  ++SS+ ++TI +WTI+LA+ L V GLMN 
Sbjct: 779  ATGKVIIGGIMEHIEQAGIHSGDSACSIPYNSLSSTAVETIRTWTIQLAQALKVIGLMNI 838

Query: 927  QYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPKH 986
            QYA+     VY++EANPRASRTVP+VSKA G PLAK A+L+MSG++L  LG TK+V+P++
Sbjct: 839  QYAVQGE-QVYIIEANPRASRTVPYVSKATGVPLAKLASLIMSGETLASLGVTKDVVPEY 897

Query: 987  VSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVFL 1046
            V+VKEAVLPF KF G D LLGPEMRSTGEVMGID  F  AFAKA++AAG  L L GTVF+
Sbjct: 898  VAVKEAVLPFNKFPGSDTLLGPEMRSTGEVMGIDSDFGKAFAKAELAAGVDLALQGTVFI 957

Query: 1047 SLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIA-VERVLKMHEGRPHAGDMVA 1105
            S++D  K     + + FLD+GFKIV+TSGT   L+  GI  VE VLK+HEGRPH  D + 
Sbjct: 958  SMSDRDKQAAVPVVQDFLDLGFKIVATSGTRQILQENGIKEVELVLKVHEGRPHVIDWIK 1017

Query: 1106 NGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTVTMT 1165
            N QIQ+++ T +G+   Q D   +RR  L YK+P+ITTV+GA A   AIRSL+S T+ + 
Sbjct: 1018 NKQIQLIINTPTGEE-SQTDARLIRRMALDYKLPIITTVAGAKATVAAIRSLRSETLNVK 1076

Query: 1166 ALQDFFDV 1173
            ALQD+  V
Sbjct: 1077 ALQDYISV 1084


>gi|254424145|ref|ZP_05037863.1| carbamoyl-phosphate synthase, large subunit [Synechococcus sp. PCC
            7335]
 gi|196191634|gb|EDX86598.1| carbamoyl-phosphate synthase, large subunit [Synechococcus sp. PCC
            7335]
          Length = 1070

 Score = 1519 bits (3934), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 731/1076 (67%), Positives = 875/1076 (81%), Gaps = 7/1076 (0%)

Query: 96   LILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLADRTYITPMT 155
            +++G+GPIVIGQACEFDYSGTQACKAL+EEGYEV+L+NSNPATIMTDP +ADRTYI P+T
Sbjct: 1    MLIGSGPIVIGQACEFDYSGTQACKALREEGYEVVLVNSNPATIMTDPDIADRTYIEPLT 60

Query: 156  PELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDAIKKAEDRD 215
             +L+EQV+ +ERPDALLPTMGGQTALNLAV LA+ G L+KYGVELIGAKL+AI+KAEDR 
Sbjct: 61   ADLLEQVIVRERPDALLPTMGGQTALNLAVELAKCGVLDKYGVELIGAKLEAIEKAEDRK 120

Query: 216  LFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGIAYNKEEFE 275
            LFK+AM  IGV   PSG+  T+DE   I  +IG +PLIIRPAFT+GG+GGGIAYNKEEFE
Sbjct: 121  LFKEAMLKIGVGVCPSGLAETMDESWEINQQIGSYPLIIRPAFTMGGSGGGIAYNKEEFE 180

Query: 276  AICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMGVHTGDSIT 335
             IC++GL AS  SQ+L+E+SLLGWKEYELEVMRDLADNVVIICSIEN+DPMGVHTGDSIT
Sbjct: 181  TICRSGLEASPVSQILIEQSLLGWKEYELEVMRDLADNVVIICSIENIDPMGVHTGDSIT 240

Query: 336  VAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMNPRVSRSSA 395
            VAPAQTLTDKEYQRLRD SI IIREIGVE GGSN+QF+VNP  G+V+VIEMNPRVSRSSA
Sbjct: 241  VAPAQTLTDKEYQRLRDASIKIIREIGVETGGSNIQFSVNPDTGDVIVIEMNPRVSRSSA 300

Query: 396  LASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRFAFEKFPGS 455
            LASKATGFPIAK AAKL+VGY L++I NDITKKTPASFEP+IDYVVTK+PRFAFEKFPGS
Sbjct: 301  LASKATGFPIAKFAAKLAVGYRLNEISNDITKKTPASFEPTIDYVVTKVPRFAFEKFPGS 360

Query: 456  EPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDWEQLKYSLRV 515
               LTTQMKSVGEAMA+GRTF ESFQKALRSLE G +GWGC   ++L     Q++  LR 
Sbjct: 361  SSTLTTQMKSVGEAMAIGRTFTESFQKALRSLETGRAGWGCDRSEKLP-TLSQVRSDLRR 419

Query: 516  PNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSVSNMTKDDFY 575
            P+P+R+ A++ AMK G+ V+EI+EL+ ID WFL +F  LI +E+FL    + ++ K    
Sbjct: 420  PHPERIFAVHHAMKLGLSVEEIYELTAIDPWFLDKFASLITIEKFLRQTPLPDINKSQLL 479

Query: 576  EVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTPYMYSSYDFE 635
             +K+ GFSD+QIAFAT+S E  VRE R SL V+P YK VDTCAAEFE+ TPY YS+Y+ E
Sbjct: 480  AIKQEGFSDRQIAFATRSHEDTVREYRKSLDVVPVYKMVDTCAAEFESTTPYYYSTYEEE 539

Query: 636  CESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSNPETVSTDYD 695
             E  P+ ++KV+ILGGGPNRIGQGIEFDYCCCH SF+LQ+  YETIM+NSNPETVSTDYD
Sbjct: 540  SEVLPSDRRKVMILGGGPNRIGQGIEFDYCCCHASFALQADDYETIMVNSNPETVSTDYD 599

Query: 696  TSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHRLPSASGDGL 755
            TSDRLYFEPLT EDVLN+++ E P+G+I+QFGGQTPLKL++P+  YLD      AS +  
Sbjct: 600  TSDRLYFEPLTKEDVLNIVEAENPDGVIIQFGGQTPLKLAVPLQDYLDS----GASEEIK 655

Query: 756  VRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEIGYPVVVRPSY 815
             +IWGTSPDSIDAAEDRERF  +++EL I QP  G+A+S  +AL +A+EI YPVVVRPSY
Sbjct: 656  TKIWGTSPDSIDAAEDRERFEQMLRELDIRQPPNGLARSNEEALKVAREIDYPVVVRPSY 715

Query: 816  VLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALADSCGNVVIGG 875
            VLGGRAMEIVY+DE LV Y+  AV+V+P+ P+LIDK+L +AIE+DVDA+AD  G  VIGG
Sbjct: 716  VLGGRAMEIVYSDEDLVRYMTTAVQVEPDHPILIDKFLENAIEVDVDAIADRTGTAVIGG 775

Query: 876  IMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNCQYAITTSGD 935
            IMEHIEQAG+HSGDSAC +PT ++S + L TI  WT KLAKRLNV GLMN QYAI     
Sbjct: 776  IMEHIEQAGIHSGDSACTLPTVSLSEAALATIRDWTFKLAKRLNVIGLMNIQYAIRGE-Q 834

Query: 936  VYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPKHVSVKEAVLP 995
            VY++EANPRASRTVPFVSKA G  LA+ A  VMSGK+L DLG T+E+IP ++SVKEAVLP
Sbjct: 835  VYIIEANPRASRTVPFVSKATGARLAQLAVRVMSGKTLTDLGLTEEIIPAYLSVKEAVLP 894

Query: 996  FEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVFLSLNDLTKPH 1055
            F KF G D LLGPEMRSTGEVMGID SF  A+AKA++AAGQ LP SGTVF+S+ND  K  
Sbjct: 895  FNKFTGTDTLLGPEMRSTGEVMGIDTSFGQAYAKAELAAGQILPQSGTVFISVNDRDKAA 954

Query: 1056 LERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVANGQIQMMVIT 1115
            +  IAK F++ GF IV+TSGT   +   G+ VE +LK+HEGRPH GD + N  IQ++V +
Sbjct: 955  VIPIAKEFVEAGFGIVATSGTHRTISEAGVDVESILKIHEGRPHVGDAIKNQTIQLIVNS 1014

Query: 1116 SSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTVTMTALQDFF 1171
              G++  + D + LRR  L YK+P +TT++GA A   AIRSLK N +T+ ALQD  
Sbjct: 1015 PVGEAAQEDDRI-LRRTALDYKIPTVTTLAGAKATLAAIRSLKENQLTVKALQDHL 1069



 Score =  238 bits (607), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 137/399 (34%), Positives = 226/399 (56%), Gaps = 19/399 (4%)

Query: 90  TDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLADRT 149
           +D RK++ILG GP  IGQ  EFDY    A  AL+ + YE I++NSNP T+ TD   +DR 
Sbjct: 545 SDRRKVMILGGGPNRIGQGIEFDYCCCHASFALQADDYETIMVNSNPETVSTDYDTSDRL 604

Query: 150 YITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALA---ESGALEKYGVELIGAKLD 206
           Y  P+T E V  ++E E PD ++   GGQT L LAV L    +SGA E+   ++ G   D
Sbjct: 605 YFEPLTKEDVLNIVEAENPDGVIIQFGGQTPLKLAVPLQDYLDSGASEEIKTKIWGTSPD 664

Query: 207 AIKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGG 266
           +I  AEDR+ F+Q ++ + ++ PP+G+  + +E + +A EI ++P+++RP++ LGG    
Sbjct: 665 SIDAAEDRERFEQMLRELDIRQPPNGLARSNEEALKVAREI-DYPVVVRPSYVLGGRAME 723

Query: 267 IAYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPM 326
           I Y+ E+        +       +L++K L    E +++ + D     VI   +E+++  
Sbjct: 724 IVYSDEDLVRYMTTAVQVEPDHPILIDKFLENAIEVDVDAIADRTGTAVIGGIMEHIEQA 783

Query: 327 GVHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGE-VMVIE 385
           G+H+GDS    P  +L++     +RD++  + + + V  G  N+Q+A+    GE V +IE
Sbjct: 784 GIHSGDSACTLPTVSLSEAALATIRDWTFKLAKRLNV-IGLMNIQYAIR---GEQVYIIE 839

Query: 386 MNPRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKK-TPASFEPSIDYVVTKI 444
            NPR SR+    SKATG  +A++A ++  G +L  +   +T++  PA       Y+  K 
Sbjct: 840 ANPRASRTVPFVSKATGARLAQLAVRVMSGKTLTDL--GLTEEIIPA-------YLSVKE 890

Query: 445 PRFAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKA 483
               F KF G++ LL  +M+S GE M +  +F +++ KA
Sbjct: 891 AVLPFNKFTGTDTLLGPEMRSTGEVMGIDTSFGQAYAKA 929


>gi|434395300|ref|YP_007130247.1| carbamoyl-phosphate synthase large subunit [Gloeocapsa sp. PCC 7428]
 gi|428267141|gb|AFZ33087.1| carbamoyl-phosphate synthase large subunit [Gloeocapsa sp. PCC 7428]
          Length = 1105

 Score = 1518 bits (3930), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 734/1107 (66%), Positives = 900/1107 (81%), Gaps = 31/1107 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            +R D++KIL+LG+GPIVIGQACEFDYSGTQACKAL+EEGY+V+L+NSNPATIMTDP  AD
Sbjct: 3    RRDDIQKILLLGSGPIVIGQACEFDYSGTQACKALREEGYQVVLVNSNPATIMTDPETAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
            RTYI P+TPE+VE+++ KERP+ALLPTMGGQTALN+AVAL+++G LEKYGVELIGAKL A
Sbjct: 63   RTYIEPLTPEIVEKIIAKERPEALLPTMGGQTALNIAVALSKNGVLEKYGVELIGAKLPA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I+KAEDR LFK+AM+ IGV   PSGI +T+DE  +IA +IG +PLIIRPAFT+GGTGGGI
Sbjct: 123  IEKAEDRQLFKEAMEKIGVGVCPSGIASTVDEARAIAKQIGSYPLIIRPAFTMGGTGGGI 182

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEFE + + G+ AS  SQ+L+E+SLLGWKEYELEVMRDLADNVVIICSIEN+DPMG
Sbjct: 183  AYNQEEFETMAQGGIDASPVSQILIEQSLLGWKEYELEVMRDLADNVVIICSIENLDPMG 242

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            +HTGDSITVAPAQTLTDKEYQRLRD SI IIREIGVE GGSN+QFAVNPVDG+V+VIEMN
Sbjct: 243  IHTGDSITVAPAQTLTDKEYQRLRDASIRIIREIGVETGGSNIQFAVNPVDGDVIVIEMN 302

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRF 447
            PRVSRSSALASKATGFPIAK AAKL+VGY+LD+I NDITKKTPASFEP+IDYVVTKIPRF
Sbjct: 303  PRVSRSSALASKATGFPIAKFAAKLAVGYTLDEIKNDITKKTPASFEPTIDYVVTKIPRF 362

Query: 448  AFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDWE 507
            AFEKFPGSEP+LTTQMKSVGEAMA+GRTFQESFQKALRSLE G +GWGC   ++L    E
Sbjct: 363  AFEKFPGSEPVLTTQMKSVGEAMAIGRTFQESFQKALRSLETGRAGWGCDRAEKLP-SGE 421

Query: 508  QLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSVS 567
            Q++  LR PNP+R+ A+  AM+ G+  ++I+EL+ ID WFL + ++L++ E+FL    + 
Sbjct: 422  QIRAQLRTPNPERIFAVRHAMQLGLSTEDIYELTGIDPWFLDKMQQLLETEKFLKRTPLE 481

Query: 568  NMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTPY 627
             +TK+ FY VKR+GFSD+QIAFATK+TE  VR  R  LGVIP YK VDTCAAEFEA TPY
Sbjct: 482  KLTKEQFYAVKRQGFSDRQIAFATKTTEDAVRAYRKQLGVIPVYKTVDTCAAEFEAYTPY 541

Query: 628  MYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSNP 687
             YS+Y+ E E  P+ K+KV+ILGGGPNRIGQGIEFDYCCCH S++L++AG+ETIM+NSNP
Sbjct: 542  HYSTYEEESEVQPSDKQKVMILGGGPNRIGQGIEFDYCCCHASYALKAAGFETIMVNSNP 601

Query: 688  ETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDE--- 744
            ETVSTDYDTSDRLYFEPLT EDVLN+I+ E+P GII+QFGGQTPLKL++P+ +YL +   
Sbjct: 602  ETVSTDYDTSDRLYFEPLTKEDVLNIIEAEQPVGIIIQFGGQTPLKLAVPLQEYLSKVGN 661

Query: 745  ----------------HRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPK 788
                            H+LP      + +IWGTSPDSID AEDRERF  I+ EL I QP 
Sbjct: 662  GSSVIGATDNQSPITNHQLP------ITKIWGTSPDSIDTAEDRERFEKILHELDIAQPP 715

Query: 789  GGIAKSEADALAIAKEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVL 848
             GIA+S  DAL IA  IGYPVVVRPSYVLGGRAMEIVY+D  L  Y+  AV+V+P+ P+L
Sbjct: 716  NGIARSYQDALVIASRIGYPVVVRPSYVLGGRAMEIVYSDADLERYMTFAVQVEPDHPIL 775

Query: 849  IDKYLSDAIEIDVDALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTIS 908
            IDK+L +AIE+DVDA+AD+ G VVIGGIMEHIEQAG+HSGDSAC +P  ++ SS L+ I 
Sbjct: 776  IDKFLENAIEVDVDAIADTTGKVVIGGIMEHIEQAGIHSGDSACSLPAISLPSSVLNKIR 835

Query: 909  SWTIKLAKRLNVCGLMNCQYAI----TTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYA 964
            +WT++LA+RL V GLMN Q+A+    + +  VY+LEANPRASRTVPFVSK  G PLAK A
Sbjct: 836  TWTVQLAQRLQVVGLMNIQFAVVGAHSYNPQVYILEANPRASRTVPFVSKTTGIPLAKMA 895

Query: 965  ALVMSGKSLNDLGFTKEVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFP 1024
            +L+MSG++L  L FT+E +P H++VKEAVLPF KF G D +LGPEMRSTGEVMGID  F 
Sbjct: 896  SLIMSGETLESLNFTQEPLPNHIAVKEAVLPFNKFPGTDTILGPEMRSTGEVMGIDSDFG 955

Query: 1025 IAFAKAQIAAGQKLPLSGTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKG 1084
             AFAKA++ AG+ LP  GTVF+S++D  K  +  + K F+++GFK+V+T GT   L+  G
Sbjct: 956  KAFAKAELGAGETLPRQGTVFVSMSDRDKSLVVPVVKDFIELGFKVVATDGTRRVLKEHG 1015

Query: 1085 IAVERVLKMHEGRPHAGDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTV 1144
            + VE +LK+HEGRP+  D + N QIQ+++ T SG+   Q D   +RR  L YK+P+ITT+
Sbjct: 1016 LDVELILKLHEGRPNVLDAIKNQQIQLIINTPSGEEA-QTDARLIRRTALGYKIPIITTI 1074

Query: 1145 SGALANAEAIRSLKSNTVTMTALQDFF 1171
            +GA A A AIRSL++ ++ + A+QD+ 
Sbjct: 1075 AGAKATAAAIRSLQATSLEVKAIQDYI 1101


>gi|166367783|ref|YP_001660056.1| carbamoyl phosphate synthase large subunit [Microcystis aeruginosa
            NIES-843]
 gi|166090156|dbj|BAG04864.1| pyrimidine-specific carbamoyl-phosphate synthase large chain
            [Microcystis aeruginosa NIES-843]
          Length = 1081

 Score = 1518 bits (3929), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 736/1086 (67%), Positives = 887/1086 (81%), Gaps = 10/1086 (0%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            +R DL+KILILGAGPIVIGQACEFDYSGTQACKAL+EEGYEVIL+NSNPA+IMTDP +AD
Sbjct: 3    RRDDLQKILILGAGPIVIGQACEFDYSGTQACKALREEGYEVILVNSNPASIMTDPEMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
            RTYI P+ PE+VE+++ KERPDA+LPTMGGQTALN AVALA+SG LEKY VELIGAKL A
Sbjct: 63   RTYIEPILPEIVEKIIAKERPDAILPTMGGQTALNTAVALAKSGVLEKYNVELIGAKLPA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I+KAEDR+LFK+AM+ IGV   PSGI N L+E  +IA++IG +PLIIRPAFTLGGTGGGI
Sbjct: 123  IEKAEDRELFKKAMEKIGVPVCPSGIANNLEEAKAIAHQIGSYPLIIRPAFTLGGTGGGI 182

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEFE + + GL  S TSQ+LVEKSL+GWKEYELEVMRDLADNVVIICSIEN DPMG
Sbjct: 183  AYNQEEFEPMAQYGLDCSPTSQILVEKSLIGWKEYELEVMRDLADNVVIICSIENFDPMG 242

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQRLRDYS AIIREIGVE GGSN+QF+VNP +G+V+VIEMN
Sbjct: 243  VHTGDSITVAPAQTLTDKEYQRLRDYSKAIIREIGVETGGSNIQFSVNPTNGDVIVIEMN 302

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRF 447
            PRVSRSSALASKATGFPIAK AAKL+VGY+LD+IPNDITKKTPASFEP+IDYVVTKIPRF
Sbjct: 303  PRVSRSSALASKATGFPIAKFAAKLAVGYTLDEIPNDITKKTPASFEPTIDYVVTKIPRF 362

Query: 448  AFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDWE 507
            AFEKFPGS+P+LTTQMKSVGEAMA+GRTFQESFQKALRSLE G  G+GC  V+ L     
Sbjct: 363  AFEKFPGSQPILTTQMKSVGEAMAIGRTFQESFQKALRSLETGRFGFGCDKVETLP-PLS 421

Query: 508  QLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSVS 567
            +++  LR PNP+R+ +IY A K GM   EIHEL+ ID WFL +  +L++ E+FL    + 
Sbjct: 422  EVRAGLRTPNPERVYSIYHAFKLGMNGSEIHELTGIDPWFLDKLADLMETEKFLKRTPLK 481

Query: 568  NMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTPY 627
            ++ K+D + +K++GFSD+QIAFAT ++E EVR  R  LG++P YK VDTCAAEFEA TPY
Sbjct: 482  SLGKEDLFAIKQQGFSDRQIAFATNTSEDEVRSYRKGLGIVPVYKMVDTCAAEFEALTPY 541

Query: 628  MYSSYD-FECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSN 686
             YS+Y+  E E  P+ ++KV+ILGGGPNRIGQGIEFDYCCCH +FSL  AG+ETIM+NSN
Sbjct: 542  YYSTYEQVESEVLPSDQRKVMILGGGPNRIGQGIEFDYCCCHAAFSLSQAGFETIMVNSN 601

Query: 687  PETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHR 746
            PETVSTDYDTSDRLYFEPLT EDVLN+I+ E+PEG+I+QFGGQTPLKL++P+ +YL+   
Sbjct: 602  PETVSTDYDTSDRLYFEPLTKEDVLNIIEAEQPEGLIIQFGGQTPLKLAVPLQKYLESPN 661

Query: 747  LPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEIG 806
             P  +     +IWGTSPDSIDAAEDRERF  I++EL I QP  GIA++  ++ A+AK IG
Sbjct: 662  CPVNT-----KIWGTSPDSIDAAEDRERFEKILRELDIRQPLNGIARNFQESQAVAKRIG 716

Query: 807  YPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALAD 866
            YPVVVRPSYVLGGRAMEIVY+D  L  Y++ AV+++P+ P+LIDK+L +AIE+DVDAL+D
Sbjct: 717  YPVVVRPSYVLGGRAMEIVYSDSELERYMKYAVQIEPDHPILIDKFLENAIEVDVDALSD 776

Query: 867  SCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNC 926
            + G VVIGG+MEHIEQAGVHSGDSAC IP  ++S+S L TI  WT++LAK L V GLMN 
Sbjct: 777  ATGTVVIGGLMEHIEQAGVHSGDSACSIPHTSLSASVLTTIRQWTVELAKALKVIGLMNI 836

Query: 927  QYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPKH 986
            QYA+     VY+LEANPRASRTVP+VSKA G PLAK A+LVMSG++L +LG   E IP+H
Sbjct: 837  QYAVQGE-TVYILEANPRASRTVPYVSKATGVPLAKVASLVMSGRTLTELGIISEAIPRH 895

Query: 987  VSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVFL 1046
            ++VKEAVLPF+KF G D LLGPEMRSTGEVMGID  F  AFAKA++AAG  L  SGTVF+
Sbjct: 896  IAVKEAVLPFQKFPGADTLLGPEMRSTGEVMGIDSDFGKAFAKAEMAAGVILATSGTVFV 955

Query: 1047 SLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIA-VERVLKMHEGRPHAGDMVA 1105
            S+ND  K  +  + K    +GF++V+TSGT   L   G   ++ VLK+HEGRP   D + 
Sbjct: 956  SMNDRDKTPMVPVVKDLQSLGFRVVATSGTRKVLLENGCENIDLVLKIHEGRPDVVDWIK 1015

Query: 1106 NGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTVTMT 1165
            N  IQ +V T SG+   Q DG K+RR  L YK+P+ITT++GA A   A++SL+S  + + 
Sbjct: 1016 NDWIQFIVNTPSGEE-SQNDGRKIRRTALDYKLPIITTIAGAKATVAALKSLQSQPLEVK 1074

Query: 1166 ALQDFF 1171
            ALQD+ 
Sbjct: 1075 ALQDYL 1080


>gi|428219843|ref|YP_007104308.1| carbamoyl-phosphate synthase large subunit [Pseudanabaena sp. PCC
            7367]
 gi|427991625|gb|AFY71880.1| carbamoyl-phosphate synthase, large subunit [Pseudanabaena sp. PCC
            7367]
          Length = 1085

 Score = 1517 bits (3928), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 724/1089 (66%), Positives = 886/1089 (81%), Gaps = 13/1089 (1%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            +R D++KIL++GAGPIVIGQACEFDYSGTQACK L++EGY VIL+NSNPATIMTDP +AD
Sbjct: 3    RRNDIQKILLIGAGPIVIGQACEFDYSGTQACKVLRDEGYYVILVNSNPATIMTDPAMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
            RTYI P+TPE+V Q++EKERPDA+LPTMGGQTALN AVALAE+G L+K+GVELIGAKL+A
Sbjct: 63   RTYIEPITPEIVAQIIEKERPDAILPTMGGQTALNTAVALAENGTLDKFGVELIGAKLEA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I+ AEDR LFK+AM+ IGV   PSG+ NT+ E   IA +IG +PLIIRPAFTLGGTGGGI
Sbjct: 123  IQMAEDRKLFKEAMERIGVAVCPSGLANTMAEAREIAAQIGTYPLIIRPAFTLGGTGGGI 182

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEFE I  +GL AS TSQ+LVE+SL+GWKEYELEVMRDLADNVVIICSIEN+DPMG
Sbjct: 183  AYNQEEFEEIAASGLDASPTSQILVEQSLIGWKEYELEVMRDLADNVVIICSIENIDPMG 242

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            +HTGDSITVAPAQTLTDKEYQRLRDYSI IIREIGVE GGSN+QF+V+P  G+V+VIEMN
Sbjct: 243  IHTGDSITVAPAQTLTDKEYQRLRDYSIKIIREIGVETGGSNIQFSVDPETGDVIVIEMN 302

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRF 447
            PRVSRSSALASKATGFPIAK AAKL+VGY+LD+IPNDITKKTPASFEP+IDYVVTKIPRF
Sbjct: 303  PRVSRSSALASKATGFPIAKFAAKLAVGYTLDEIPNDITKKTPASFEPTIDYVVTKIPRF 362

Query: 448  AFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDWE 507
            AFEKFPGSEP+LTTQMKSVGEAM++GRTFQESFQKALRSLE    G+G   ++E+    E
Sbjct: 363  AFEKFPGSEPVLTTQMKSVGEAMSIGRTFQESFQKALRSLETNRYGFGADRLEEMP-SLE 421

Query: 508  QLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSVS 567
            Q+K SLRVPNP+R+ +I      G+ V  I +L+ +D WFL +  EL+D+E  +   S+S
Sbjct: 422  QVKASLRVPNPERIFSIRHGFLLGLSVPAIAQLTGVDPWFLQKMGELVDMELAIKGNSLS 481

Query: 568  NMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTPY 627
             +  D    +K+ GFSD+QIAF T + E +VR  R SLG++P+YK VDTCAAEFEA TPY
Sbjct: 482  EIDADQMLSIKQMGFSDRQIAFLTSTDEDDVRIHRKSLGIVPAYKTVDTCAAEFEAFTPY 541

Query: 628  MYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSNP 687
             YS+Y+ E E  P+ ++KV+ILGGGPNRIGQGIEFDYCCCH SFSL+   +ETIM+NSNP
Sbjct: 542  HYSTYETETEVQPSDRRKVMILGGGPNRIGQGIEFDYCCCHASFSLRDKDFETIMVNSNP 601

Query: 688  ETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHRL 747
            ETVSTDYDTSDRLYFEPLT EDVLN+I+ E+PEGII+QFGGQTPLKLS+ +  YL+EH+ 
Sbjct: 602  ETVSTDYDTSDRLYFEPLTREDVLNIIETEKPEGIIIQFGGQTPLKLSVKLLSYLEEHQA 661

Query: 748  PSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEIGY 807
               +     +IWGTSPDSIDA+EDRERF AI K+L I QP+ G+A+SE +AL +A  IGY
Sbjct: 662  ELGT-----KIWGTSPDSIDASEDRERFEAICKDLGIVQPRNGLARSEEEALKVASNIGY 716

Query: 808  PVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALADS 867
            PVVVRPSYVLGGR ME+VY+DE L  Y+  A+ ++PE PVLID++L  AIE+DVDA+AD 
Sbjct: 717  PVVVRPSYVLGGRGMEVVYSDEDLKDYMYKAILIEPEHPVLIDQFLEGAIEVDVDAIADQ 776

Query: 868  CGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNCQ 927
             G VVIGGIMEHIE+AG+HSGDSAC IPT +++ + L+TI  WTIKLA++L V GLMN Q
Sbjct: 777  TGKVVIGGIMEHIEEAGIHSGDSACAIPTFSLAETTLNTIREWTIKLAEKLKVVGLMNVQ 836

Query: 928  YAITTS------GDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKE 981
            YA+  S        VY+LEANPRASRTVPFVSKAIG PL  YA+ +M+G++L  LG TKE
Sbjct: 837  YAVQISPNDPKLAQVYILEANPRASRTVPFVSKAIGVPLVAYASRIMAGETLEQLGLTKE 896

Query: 982  VIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLS 1041
            ++PKH+++KEAVLPF KF G D +LGPEMRSTGEVMGID  F  AFAKAQ+AAGQKLPL 
Sbjct: 897  IVPKHIAIKEAVLPFAKFSGTDTILGPEMRSTGEVMGIDTEFGRAFAKAQLAAGQKLPLE 956

Query: 1042 GTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAG 1101
            G VF+S+ND  K  +  +A+ F+D+GF++++T GT   L+ K I  E VLK+ EGRP+  
Sbjct: 957  GAVFISVNDRDKAGVAAVAEGFVDLGFQVIATEGTHRILKKKNIKAELVLKVSEGRPNIS 1016

Query: 1102 DMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNT 1161
            D++ N Q+Q++V + SG+   Q DG  +RR  L YK+PVITT++GA A   AIRSL++ +
Sbjct: 1017 DVIKNKQVQIIVNSPSGEEA-QADGKLIRRAALVYKIPVITTLAGAKAVIAAIRSLQNES 1075

Query: 1162 VTMTALQDF 1170
            + +  +Q++
Sbjct: 1076 LVVKPIQEY 1084


>gi|425464546|ref|ZP_18843856.1| carbamoyl phosphate synthase, large subunit [Microcystis aeruginosa
            PCC 9809]
 gi|389833412|emb|CCI22090.1| carbamoyl phosphate synthase, large subunit [Microcystis aeruginosa
            PCC 9809]
          Length = 1081

 Score = 1516 bits (3925), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 736/1088 (67%), Positives = 888/1088 (81%), Gaps = 10/1088 (0%)

Query: 86   LGKRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGL 145
            + +R DL+KILILGAGPIVIGQACEFDYSGTQACKAL+EEGYEVIL+NSNPA+IMTDP +
Sbjct: 1    MPRRDDLQKILILGAGPIVIGQACEFDYSGTQACKALREEGYEVILVNSNPASIMTDPEM 60

Query: 146  ADRTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKL 205
            ADRTYI P+ PE+VE+++ KERPDA+LPTMGGQTALN AVALA+SG LEKY VELIGAKL
Sbjct: 61   ADRTYIEPILPEIVEKIIAKERPDAILPTMGGQTALNTAVALAKSGVLEKYNVELIGAKL 120

Query: 206  DAIKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGG 265
             AI+KAEDR+LFK+AM+ IGV   PSGI N L+E  +IA++IG +PLIIRPAFTLGGTGG
Sbjct: 121  PAIEKAEDRELFKKAMEKIGVPVCPSGIANNLEEAKAIAHQIGSYPLIIRPAFTLGGTGG 180

Query: 266  GIAYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDP 325
            GIAYN+EEFE + + GL  S TSQ+LVEKSL+GWKEYELEVMRDLADNVVIICSIEN DP
Sbjct: 181  GIAYNQEEFEPMAQYGLDCSPTSQILVEKSLIGWKEYELEVMRDLADNVVIICSIENFDP 240

Query: 326  MGVHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIE 385
            MGVHTGDSITVAPAQTLTDKEYQRLRDYS AIIREIGVE GGSN+QF+VNP +G+V+VIE
Sbjct: 241  MGVHTGDSITVAPAQTLTDKEYQRLRDYSKAIIREIGVETGGSNIQFSVNPTNGDVIVIE 300

Query: 386  MNPRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIP 445
            MNPRVSRSSALASKATGFPIAK AAKL+VGY+LD+IPNDITKKTPASFEP+IDYVVTKIP
Sbjct: 301  MNPRVSRSSALASKATGFPIAKFAAKLAVGYTLDEIPNDITKKTPASFEPTIDYVVTKIP 360

Query: 446  RFAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWD 505
            RFAFEKFPGS+P+LTTQMKSVGEAMA+GRTFQESFQKALRSLE G  G+GC  V+ L   
Sbjct: 361  RFAFEKFPGSQPILTTQMKSVGEAMAIGRTFQESFQKALRSLETGRFGFGCDKVETLP-P 419

Query: 506  WEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQS 565
              +++  LR PNP+R+ +IY A K GM  +EIHEL+ ID WFL +  +L++ E+FL    
Sbjct: 420  LSEVRAGLRTPNPERVYSIYHAFKLGMNGEEIHELTGIDPWFLDKLADLMETEKFLKRTP 479

Query: 566  VSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANT 625
            + ++ K+D + +K++GFSD+QIAFAT S+E EVR  R  LG++P YK VDTCAAEFEA T
Sbjct: 480  LKSLGKEDLFAIKQQGFSDRQIAFATNSSEDEVRSYRKGLGIVPVYKMVDTCAAEFEALT 539

Query: 626  PYMYSSYD-FECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMN 684
            PY YS+Y+  E E  P+ ++KV+ILGGGPNRIGQGIEFDYCCCH +FSL  AG+ETIM+N
Sbjct: 540  PYYYSTYEQVESEVLPSDQRKVMILGGGPNRIGQGIEFDYCCCHAAFSLSQAGFETIMVN 599

Query: 685  SNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDE 744
            SNPETVSTDYDTSDRLYFEPLT EDVLN+I+ E+PEG+I+QFGGQTPLKL++P+ +YL+ 
Sbjct: 600  SNPETVSTDYDTSDRLYFEPLTKEDVLNIIEAEQPEGLIIQFGGQTPLKLAVPLQKYLES 659

Query: 745  HRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKE 804
               P  +     +IWGTSPDSIDAAEDRERF  I++EL I QP  GIA++  ++ A+AK 
Sbjct: 660  PNCPVNT-----KIWGTSPDSIDAAEDRERFEKILRELDIRQPPNGIARNFQESQAVAKR 714

Query: 805  IGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDAL 864
            IGYPVVVRPSYVLGGRAMEIVY+D  L  Y++ AV+++P+ P+LIDK+L +AIE+DVDAL
Sbjct: 715  IGYPVVVRPSYVLGGRAMEIVYSDSELERYMKYAVQIEPDHPILIDKFLENAIEVDVDAL 774

Query: 865  ADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLM 924
            +D+   VVIGG+MEHIEQAGVHSGDSAC IP  ++S+S L TI  WT++LAK L V GLM
Sbjct: 775  SDATETVVIGGLMEHIEQAGVHSGDSACSIPHTSLSASVLTTIRQWTVELAKALKVIGLM 834

Query: 925  NCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIP 984
            N QYA+     VY+LEANPRASRTVP+VSKA G PLAK A+LVMSG++L +LG   E IP
Sbjct: 835  NIQYAVQGE-TVYILEANPRASRTVPYVSKATGVPLAKVASLVMSGRTLTELGIISEAIP 893

Query: 985  KHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTV 1044
            +H++VKEAVLPF+KF G D LLGPEMRSTGEVMGID  F  AFAKA++AAG  L  SGTV
Sbjct: 894  RHIAVKEAVLPFQKFPGADTLLGPEMRSTGEVMGIDSDFGKAFAKAEMAAGVILATSGTV 953

Query: 1045 FLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIA-VERVLKMHEGRPHAGDM 1103
            F+S+ND  K  +  + K    +GF++V+TSGT   L   G   ++ VLK+HEGRP   D 
Sbjct: 954  FVSMNDRDKTPMVPVVKDLQSLGFRVVATSGTRKVLLENGCENIDLVLKIHEGRPDVVDW 1013

Query: 1104 VANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTVT 1163
            + N  IQ +V T SG+   Q DG K+RR  L YK+P+ITT++GA A   A++SL+S  + 
Sbjct: 1014 IKNDWIQFIVNTPSGEE-SQNDGRKIRRTALDYKLPIITTIAGAKATVAALKSLQSQPLE 1072

Query: 1164 MTALQDFF 1171
            + ALQD+ 
Sbjct: 1073 VKALQDYL 1080


>gi|425443017|ref|ZP_18823249.1| carbamoyl phosphate synthase, large subunit [Microcystis aeruginosa
            PCC 9717]
 gi|389715772|emb|CCH99899.1| carbamoyl phosphate synthase, large subunit [Microcystis aeruginosa
            PCC 9717]
          Length = 1081

 Score = 1516 bits (3925), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 736/1086 (67%), Positives = 887/1086 (81%), Gaps = 10/1086 (0%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            +R DL+KILILGAGPIVIGQACEFDYSGTQACKAL+EEGYEVIL+NSNPA+IMTDP +AD
Sbjct: 3    RRDDLQKILILGAGPIVIGQACEFDYSGTQACKALREEGYEVILVNSNPASIMTDPEMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
            RTYI P+ PE+VE+++ KERPDA+LPTMGGQTALN AVALA+SG LEKY VELIGAKL A
Sbjct: 63   RTYIEPILPEIVEKIIAKERPDAILPTMGGQTALNTAVALAKSGVLEKYNVELIGAKLPA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I+KAEDR+LFK+AM+ IGV   PSGI N L+E  +IA++IG +PLIIRPAFTLGGTGGGI
Sbjct: 123  IEKAEDRELFKKAMEKIGVPVCPSGIANNLEEAKAIAHQIGSYPLIIRPAFTLGGTGGGI 182

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEFE + + GL  S TSQ+LVEKSL+GWKEYELEVMRDLADNVVIICSIEN DPMG
Sbjct: 183  AYNQEEFEPMAQYGLDCSPTSQILVEKSLIGWKEYELEVMRDLADNVVIICSIENFDPMG 242

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQRLRDYS AIIREIGVE GGSN+QF+VNP +G+V+VIEMN
Sbjct: 243  VHTGDSITVAPAQTLTDKEYQRLRDYSKAIIREIGVETGGSNIQFSVNPTNGDVIVIEMN 302

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRF 447
            PRVSRSSALASKATGFPIAK AAKL+VGY+LD+IPNDITKKTPASFEP+IDYVVTKIPRF
Sbjct: 303  PRVSRSSALASKATGFPIAKFAAKLAVGYTLDEIPNDITKKTPASFEPTIDYVVTKIPRF 362

Query: 448  AFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDWE 507
            AFEKFPGS+P+LTTQMKSVGEAMA+GRTFQESFQKALRSLE G  G+GC  V+ L     
Sbjct: 363  AFEKFPGSQPILTTQMKSVGEAMAIGRTFQESFQKALRSLETGRFGFGCDKVETLP-PLS 421

Query: 508  QLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSVS 567
            +++  LR PNP+R+ +IY A K GM  +EIHEL+ ID WFL +  +L++ E+FL    + 
Sbjct: 422  EVRAGLRTPNPERVYSIYHAFKLGMNGEEIHELTGIDPWFLDKLADLMETEKFLKRTPLK 481

Query: 568  NMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTPY 627
            ++ K+D + +K++GFSD+QIAFAT ++E EVR  R  LG+IP YK VDTCAAEFEA TPY
Sbjct: 482  SLGKEDLFAIKQQGFSDRQIAFATNTSEDEVRSYRKGLGIIPVYKMVDTCAAEFEALTPY 541

Query: 628  MYSSYD-FECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSN 686
             YS+Y+  E E  P+ K+KV+ILGGGPNRIGQGIEFDYCCCH +FSL +AG+ETIM+NSN
Sbjct: 542  YYSTYERVESEVLPSDKRKVMILGGGPNRIGQGIEFDYCCCHAAFSLSNAGFETIMVNSN 601

Query: 687  PETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHR 746
            PETVSTDYDTSDRLYFEPLT EDVLN+I+ E+PEG+I+QFGGQTPLKL++P+ +YL+   
Sbjct: 602  PETVSTDYDTSDRLYFEPLTKEDVLNIIEAEQPEGLIIQFGGQTPLKLAVPLQKYLESPN 661

Query: 747  LPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEIG 806
             P  +     +IWGTSPDSID AEDRERF  I++EL I QP  GIA++  ++ A+A+ IG
Sbjct: 662  CPVNT-----KIWGTSPDSIDTAEDRERFEQILRELDIRQPLNGIARNFQESQAVAQRIG 716

Query: 807  YPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALAD 866
            YPVVVRPSYVLGGRAMEIVY+D  L  Y++ AV+++P+ P+LIDK+L +AIE+DVDAL+D
Sbjct: 717  YPVVVRPSYVLGGRAMEIVYSDSELERYMKYAVQIEPDHPILIDKFLENAIEVDVDALSD 776

Query: 867  SCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNC 926
            + G VVIGG+MEHIEQAGVHSGDSAC IP  ++S+  L TI  WT++LAK L V GLMN 
Sbjct: 777  ATGTVVIGGLMEHIEQAGVHSGDSACSIPHTSLSAPVLTTIRQWTVELAKALKVIGLMNI 836

Query: 927  QYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPKH 986
            QYA+     VY+LEANPRASRTVP+VSKA G PLAK A+LVMSGK+L +LG   E IP+H
Sbjct: 837  QYAVQGE-TVYILEANPRASRTVPYVSKATGVPLAKVASLVMSGKTLAELGIISEAIPRH 895

Query: 987  VSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVFL 1046
            ++VKEAVLPF+KF G D LLGPEMRSTGEVMGID  F  AFAKA++AAG  L  SGTVF+
Sbjct: 896  IAVKEAVLPFQKFPGADTLLGPEMRSTGEVMGIDSDFGKAFAKAEMAAGVILATSGTVFV 955

Query: 1047 SLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIA-VERVLKMHEGRPHAGDMVA 1105
            S+ND  K  +  + K    +GF++V+TSGT   L   G   ++ VLK+HEGRP   D + 
Sbjct: 956  SMNDRDKTPMVPVVKDLQSLGFRVVATSGTRKVLLENGCENIDLVLKIHEGRPDVVDWIK 1015

Query: 1106 NGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTVTMT 1165
            N  IQ +V T SG+   Q DG K+RR  L YK+P+ITT++GA A   A++SL+S  + + 
Sbjct: 1016 NDWIQFIVNTPSGEE-SQNDGRKIRRTALDYKLPIITTIAGAKATVAALKSLQSQPLEVK 1074

Query: 1166 ALQDFF 1171
            ALQD+ 
Sbjct: 1075 ALQDYL 1080


>gi|218442117|ref|YP_002380446.1| carbamoyl phosphate synthase large subunit [Cyanothece sp. PCC 7424]
 gi|218174845|gb|ACK73578.1| carbamoyl-phosphate synthase, large subunit [Cyanothece sp. PCC 7424]
          Length = 1082

 Score = 1516 bits (3924), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 741/1086 (68%), Positives = 878/1086 (80%), Gaps = 10/1086 (0%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            +R DL KILILG+GPIVIGQACEFDYSGTQACKAL+EEGYEV+LINSNPA+IMTDP +AD
Sbjct: 3    RRNDLHKILILGSGPIVIGQACEFDYSGTQACKALREEGYEVVLINSNPASIMTDPEMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
            RTYI P+TPE+VE+V+ KERPDA+LPTMGGQTALNLAV+LA++GAL++Y VELIGAKL A
Sbjct: 63   RTYIEPLTPEMVEKVIAKERPDAILPTMGGQTALNLAVSLAKNGALDRYNVELIGAKLPA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I+ AEDR LFK AM  IGV   PSGI + LD+  +IA EIG +PLIIRPAFTLGGTGGGI
Sbjct: 123  IEMAEDRLLFKDAMARIGVPVCPSGIASNLDQAKAIALEIGSYPLIIRPAFTLGGTGGGI 182

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEFE + + GL  S  SQ+LVEKSLLGWKEYELEVMRDLADNVVIICSIEN+DPMG
Sbjct: 183  AYNQEEFEVMAQYGLDCSPVSQILVEKSLLGWKEYELEVMRDLADNVVIICSIENIDPMG 242

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQRLRDYS AIIREIGVE GGSN+QF+VNPVDGEV+VIEMN
Sbjct: 243  VHTGDSITVAPAQTLTDKEYQRLRDYSKAIIREIGVETGGSNIQFSVNPVDGEVIVIEMN 302

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRF 447
            PRVSRSSALASKATGFPIAK AAKL+VGY+LD+I NDITK+TPASFEP+IDYVVTKIPRF
Sbjct: 303  PRVSRSSALASKATGFPIAKFAAKLAVGYTLDEISNDITKQTPASFEPTIDYVVTKIPRF 362

Query: 448  AFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDWE 507
            AFEKFPG++P+LTTQMKSVGEAMA+GRTFQESFQKALRSLE G  G+GC   + L     
Sbjct: 363  AFEKFPGAQPILTTQMKSVGEAMAIGRTFQESFQKALRSLETGRYGFGCDKNETLP-SLS 421

Query: 508  QLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSVS 567
            QL+ SLR PNP+R+ ++Y   K GM V+EI EL+ ID WFL + +EL+D E+FL    ++
Sbjct: 422  QLRASLRTPNPERIFSVYQGFKLGMTVEEIFELTAIDPWFLDKMQELVDTEKFLKQTPLN 481

Query: 568  NMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTPY 627
             +T +    VK++GFSD+QIAFATK+ E EVR  R  LG+ P YK VDTCAAEFEA TPY
Sbjct: 482  KITAEQMRFVKQQGFSDRQIAFATKTGEDEVRNYRKELGITPVYKLVDTCAAEFEAYTPY 541

Query: 628  MYSSY-DFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSN 686
             YS+Y + E E  P  K+KV+ILGGGPNRIGQGIEFDYCCCH +F+L   G+ETIM+NSN
Sbjct: 542  YYSTYEEGENEIRPVDKRKVMILGGGPNRIGQGIEFDYCCCHAAFALSDEGFETIMVNSN 601

Query: 687  PETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHR 746
            PETVSTDYDTSDRLYFEPLT EDVLN+I+ E PEG+I+QFGGQTPLKL++P+ +YL+   
Sbjct: 602  PETVSTDYDTSDRLYFEPLTKEDVLNIIEQENPEGVIIQFGGQTPLKLAVPLQKYLESPN 661

Query: 747  LPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEIG 806
             P  +     +IWGTSPDSID AEDRERF  I+ +L I QP  GIA+S  ++L IA+ IG
Sbjct: 662  CPVQT-----KIWGTSPDSIDIAEDRERFEKILSQLKITQPPNGIARSFDESLIIARRIG 716

Query: 807  YPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALAD 866
            YPVVVRPSYVLGGRAMEIV++D+ L  Y+  AV+V+P+ P+LIDK+L +AIE+DVD LAD
Sbjct: 717  YPVVVRPSYVLGGRAMEIVFSDQDLERYMTYAVQVEPDHPILIDKFLENAIEVDVDTLAD 776

Query: 867  SCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNC 926
            + G  +IGGIMEHIE+AGVHSGDSAC IP  +++ + LDTI +WT +LA  L V GLMN 
Sbjct: 777  TSGKSIIGGIMEHIEEAGVHSGDSACSIPYSSLTPAVLDTIRTWTSQLANVLKVVGLMNI 836

Query: 927  QYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPKH 986
            QYA+     VY+LEANPRASRTVP+VSKA G PLAK A+LVMSGK+L  LG T+E IPKH
Sbjct: 837  QYAVQGE-QVYILEANPRASRTVPYVSKATGVPLAKIASLVMSGKTLESLGITQEFIPKH 895

Query: 987  VSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVFL 1046
            V+VKEAVLPFEKF G D LLGPEMRSTGEVMGID  F  AFAKA+IAAG +L  SGTVF+
Sbjct: 896  VAVKEAVLPFEKFPGADTLLGPEMRSTGEVMGIDTDFGKAFAKAEIAAGVRLATSGTVFV 955

Query: 1047 SLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIA-VERVLKMHEGRPHAGDMVA 1105
            S+ND  K     + K  + +GFKIV+TSGT   LE  GI  VE VLK+HEGRPH  D + 
Sbjct: 956  SMNDRDKKATVPVVKDLISLGFKIVATSGTQKVLEENGIEDVEVVLKLHEGRPHVIDWIK 1015

Query: 1106 NGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTVTMT 1165
            N  IQ ++ T SG+   Q DG  +RR  L YK+P+ITT++GA A   A+R+L+S  + + 
Sbjct: 1016 NHWIQFIINTPSGEE-SQADGRSIRRTALDYKLPIITTIAGAKATVAALRTLQSEPLEVK 1074

Query: 1166 ALQDFF 1171
            A+QD+ 
Sbjct: 1075 AIQDYI 1080


>gi|425435156|ref|ZP_18815615.1| carbamoyl phosphate synthase, large subunit [Microcystis aeruginosa
            PCC 9432]
 gi|389675167|emb|CCH95729.1| carbamoyl phosphate synthase, large subunit [Microcystis aeruginosa
            PCC 9432]
          Length = 1081

 Score = 1514 bits (3919), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 734/1086 (67%), Positives = 887/1086 (81%), Gaps = 10/1086 (0%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            +R DL+KILILGAGPIVIGQACEFDYSGTQACKAL+EEGYEVIL+NSNPA+IMTDP +AD
Sbjct: 3    RRDDLKKILILGAGPIVIGQACEFDYSGTQACKALREEGYEVILVNSNPASIMTDPEMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
            RTYI P+ PE+VE+++ KERPDA+LPTMGGQTALN AVALA+SG LEKY VELIGAKL A
Sbjct: 63   RTYIEPILPEIVEKIIAKERPDAILPTMGGQTALNTAVALAKSGVLEKYNVELIGAKLPA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I+KAEDR+LFK+AM+ IGV   PSGI N L+E  +I ++IG +PLIIRPAFTLGGTGGGI
Sbjct: 123  IEKAEDRELFKKAMEKIGVPVCPSGIANNLEEAKAIGHQIGSYPLIIRPAFTLGGTGGGI 182

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEFE + + GL  S TSQ+LVEKSL+GWKEYELEVMRDLADNVVIICSIEN DPMG
Sbjct: 183  AYNQEEFEPMAQYGLDCSPTSQILVEKSLIGWKEYELEVMRDLADNVVIICSIENFDPMG 242

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQRLRDYS AIIREIGVE GGSN+QF+VNP +G+V+VIEMN
Sbjct: 243  VHTGDSITVAPAQTLTDKEYQRLRDYSKAIIREIGVETGGSNIQFSVNPTNGDVIVIEMN 302

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRF 447
            PRVSRSSALASKATGFPIAK AAKL+VGY+LD+IPNDITKKTPASFEP+IDYVVTKIPRF
Sbjct: 303  PRVSRSSALASKATGFPIAKFAAKLAVGYTLDEIPNDITKKTPASFEPTIDYVVTKIPRF 362

Query: 448  AFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDWE 507
            AFEKFPGS+P+LTTQMKSVGEAMA+GRTFQESFQKALRSLE G  G+GC  V+ L     
Sbjct: 363  AFEKFPGSQPILTTQMKSVGEAMAIGRTFQESFQKALRSLETGRFGFGCDKVETLP-PLS 421

Query: 508  QLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSVS 567
            +++  LR PNP+R+ +IY A K GM  +EIHEL+ ID WFL +  +L++ E+FL    + 
Sbjct: 422  EVRAGLRTPNPERVYSIYHAFKLGMNGEEIHELTGIDPWFLDKLADLMETEKFLKRTPLK 481

Query: 568  NMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTPY 627
            ++ K+D + +K++GFSD+QIAFAT ++E EVR  R  LG++P YK VDTCAAEFEA TPY
Sbjct: 482  SLGKEDLFAIKQQGFSDRQIAFATNTSEDEVRSYRKGLGIVPVYKMVDTCAAEFEALTPY 541

Query: 628  MYSSYD-FECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSN 686
             YS+Y+  E E  P+ K+KV+ILGGGPNRIGQGIEFDYCCCH +FSL  AG+ETIM+NSN
Sbjct: 542  YYSTYERVESEVLPSDKRKVMILGGGPNRIGQGIEFDYCCCHAAFSLSKAGFETIMVNSN 601

Query: 687  PETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHR 746
            PETVSTDYDTSDRLYFEPLT EDVLN+I+ E+PEG+I+QFGGQTPLKL++P+ +YL+   
Sbjct: 602  PETVSTDYDTSDRLYFEPLTKEDVLNIIEAEQPEGLIIQFGGQTPLKLAVPLQKYLESPN 661

Query: 747  LPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEIG 806
             P  +     +IWGTSPDSIDAAEDRERF  I+++L I QP  GIA++  ++ A+A+ IG
Sbjct: 662  CPVNT-----KIWGTSPDSIDAAEDRERFEQILRQLDIRQPLNGIARNFQESQAVAQRIG 716

Query: 807  YPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALAD 866
            YPVVVRPSYVLGGRAMEIVY+D  L  Y++ AV+++P+ P+LIDK+L +AIE+DVDAL+D
Sbjct: 717  YPVVVRPSYVLGGRAMEIVYSDSELERYMKYAVQIEPDHPILIDKFLENAIEVDVDALSD 776

Query: 867  SCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNC 926
            + G VVIGG+MEHIEQAGVHSGDSAC IP  ++S+S L TI  WT++LAK L V GLMN 
Sbjct: 777  ATGTVVIGGLMEHIEQAGVHSGDSACSIPHTSLSASVLTTIRQWTVELAKALKVIGLMNI 836

Query: 927  QYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPKH 986
            QYA+     VY+LEANPRASRTVP+VSKA G PLAK A+LVMSGK+L +LG   E IP+H
Sbjct: 837  QYAVQGE-TVYILEANPRASRTVPYVSKATGVPLAKVASLVMSGKTLTELGIISEAIPRH 895

Query: 987  VSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVFL 1046
            ++VKEAVLPF+KF G D LLGPEMRSTGEVMGID  F  AFAKA++AAG  L  SGTVF+
Sbjct: 896  IAVKEAVLPFQKFPGADTLLGPEMRSTGEVMGIDSDFGKAFAKAEMAAGVILATSGTVFV 955

Query: 1047 SLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIA-VERVLKMHEGRPHAGDMVA 1105
            S++D  K  +  + K    +GF++V+TSGT   L   G   ++ VLK+HEGRP   D + 
Sbjct: 956  SMSDRDKTPMVPVVKDLQSLGFRVVATSGTRKVLLENGCENIDLVLKIHEGRPDVVDWIK 1015

Query: 1106 NGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTVTMT 1165
            N  IQ +V T SG+   Q DG K+RR  L YK+P+ITT++GA A   A++SL+S  + + 
Sbjct: 1016 NDWIQFIVNTPSGEE-SQNDGRKIRRTALDYKLPIITTIAGAKATVAALKSLQSQPLEVK 1074

Query: 1166 ALQDFF 1171
            ALQD+ 
Sbjct: 1075 ALQDYL 1080


>gi|428772325|ref|YP_007164113.1| carbamoyl-phosphate synthase large subunit [Cyanobacterium stanieri
            PCC 7202]
 gi|428686604|gb|AFZ46464.1| carbamoyl-phosphate synthase large subunit [Cyanobacterium stanieri
            PCC 7202]
          Length = 1082

 Score = 1513 bits (3918), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 736/1087 (67%), Positives = 876/1087 (80%), Gaps = 11/1087 (1%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            +R D+ KILILG+GPI+IGQACEFDYSGTQACKAL+EEGYEV+L+NSNPATIMTDP  A+
Sbjct: 3    RREDINKILILGSGPIIIGQACEFDYSGTQACKALREEGYEVVLVNSNPATIMTDPDTAE 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
            RTYI P+TPE+VE+V+ KERPDALLPTMGGQTALN AV+LAESGAL KYGVELIGAKL A
Sbjct: 63   RTYIEPITPEIVEKVIAKERPDALLPTMGGQTALNTAVSLAESGALNKYGVELIGAKLPA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            IK AEDR+LFK AM  IGV   PSGI +  DE  ++A EIG +PLIIRPAFT+GGTGGGI
Sbjct: 123  IKMAEDRELFKDAMARIGVPVCPSGIASNWDEAKAVAKEIGSYPLIIRPAFTMGGTGGGI 182

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEFE + K G+ AS  SQ+L+EKSL+GWKEYELEVMRD+ADNVVIICSIEN+DPMG
Sbjct: 183  AYNQEEFEEMAKFGMDASPMSQILIEKSLIGWKEYELEVMRDMADNVVIICSIENIDPMG 242

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQRLRDY+ AIIREIGVE GGSN+QF++NP++GEV+VIEMN
Sbjct: 243  VHTGDSITVAPAQTLTDKEYQRLRDYAKAIIREIGVETGGSNIQFSINPINGEVIVIEMN 302

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRF 447
            PRVSRSSALASKATGFPIAK AAKL+VGYSLD+I NDITKKTPASFEP+IDYVVTKIPRF
Sbjct: 303  PRVSRSSALASKATGFPIAKFAAKLAVGYSLDEISNDITKKTPASFEPTIDYVVTKIPRF 362

Query: 448  AFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDWE 507
            AFEKFPGS   LTTQMKSVGEAMA+GRTF ESFQKALRSLE G  G+GC   + L     
Sbjct: 363  AFEKFPGSSSTLTTQMKSVGEAMAIGRTFNESFQKALRSLEIGRFGFGCDRTETLP-TLS 421

Query: 508  QLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSVS 567
            Q+   LR P PDR+ ++Y A K GM V+EIH LS ID WFL + +E++++E+F+    + 
Sbjct: 422  QISSHLRTPTPDRIFSVYHAFKLGMSVEEIHGLSAIDPWFLDKMEEIVEIEKFMKRTPLK 481

Query: 568  NMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTPY 627
             +++++  E+K++GFSD QIAFATK+ E EVRE R SLGV+P YK VDTCAAEFEA TPY
Sbjct: 482  QISEEEMLEIKKQGFSDHQIAFATKTKEDEVREYRKSLGVLPVYKLVDTCAAEFEAFTPY 541

Query: 628  MYSSYDF-ECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSN 686
             YS+Y+  E E+  T K KV+ILGGGPNRIGQGIEFDYCCCH SFSLQ AG+ETIM+NSN
Sbjct: 542  YYSTYESGESENNVTNKSKVMILGGGPNRIGQGIEFDYCCCHASFSLQDAGFETIMVNSN 601

Query: 687  PETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHR 746
            PETVSTDYDTSDRLYFEPLT EDVLN+I+ E P+G+I+QFGGQTPLKL++P+  YL    
Sbjct: 602  PETVSTDYDTSDRLYFEPLTKEDVLNIIESENPDGVIIQFGGQTPLKLAVPLKNYLAHPD 661

Query: 747  LPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEIG 806
             P  +     +IWGTSPDSID AEDRE+F AI+ +L I+QP  GIA+S  +AL IA++IG
Sbjct: 662  TPVKT-----KIWGTSPDSIDTAEDREKFEAILDDLGIKQPPNGIARSFQEALIIAEKIG 716

Query: 807  YPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALAD 866
            YPVVVRPSYVLGGR M +VY    L  Y+  AV ++PE P+LIDK+L +AIE+DVDA+ D
Sbjct: 717  YPVVVRPSYVLGGRGMRVVYNTTELEEYMTYAVRIEPEHPILIDKFLQNAIEVDVDAICD 776

Query: 867  SCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNC 926
              G VVIGGIMEHIE+AGVHSGDSAC IP  T+    ++ +  WT+KLA+ L V GLMN 
Sbjct: 777  HTGQVVIGGIMEHIEEAGVHSGDSACSIPHTTLKEDVVNILRDWTVKLAQSLEVVGLMNI 836

Query: 927  QYAITTSGD-VYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPK 985
            QYA+   GD VY+LEANPRASRTVP+VSKA G PLAK A+LVM+GK+L +L  T+E+IP+
Sbjct: 837  QYAV--QGDIVYILEANPRASRTVPYVSKATGRPLAKVASLVMAGKTLQELDATEEIIPR 894

Query: 986  HVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVF 1045
            HV+VKEAVLPF KF G D LLGPEMRSTGEVMGID  F  AFAKA+I AG  +  SGTVF
Sbjct: 895  HVAVKEAVLPFNKFVGADTLLGPEMRSTGEVMGIDSDFGKAFAKAEIGAGVAIHTSGTVF 954

Query: 1046 LSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIA-VERVLKMHEGRPHAGDMV 1104
            +S+ND  K  +  +AK  +++GFK+V+TSGT   L   GI  VE VLK+HEGRPH  D +
Sbjct: 955  ISMNDRDKEAIVPVAKDLVNLGFKLVATSGTRQTLLDHGIEDVELVLKLHEGRPHVIDWI 1014

Query: 1105 ANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTVTM 1164
             N QIQ ++ T S +   Q DG K+RR  L YK+P+ITT++GA A  EAIRSL+S  + +
Sbjct: 1015 KNNQIQFIINTPSAEEESQYDGRKIRRSALDYKLPIITTIAGARATVEAIRSLQSEPLQV 1074

Query: 1165 TALQDFF 1171
             ALQD+F
Sbjct: 1075 KALQDYF 1081


>gi|159027682|emb|CAO89547.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
          Length = 1081

 Score = 1513 bits (3917), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 731/1086 (67%), Positives = 888/1086 (81%), Gaps = 10/1086 (0%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            +R DL+KILILGAGPIVIGQACEFDYSGTQACKAL+EEGYEVIL+NSNPA+IMTDP +AD
Sbjct: 3    RRDDLKKILILGAGPIVIGQACEFDYSGTQACKALREEGYEVILVNSNPASIMTDPEMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
            RTYI P+ PE+VE+++EKERPDA+LPTMGGQTALN AVALA+SG LEKY VELIGAKL A
Sbjct: 63   RTYIEPILPEIVEKIIEKERPDAILPTMGGQTALNTAVALAKSGVLEKYNVELIGAKLPA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I+KAEDR+LFK+AM+ IGV   PSGI N L+E  +I ++IG +PLIIRPAFTLGGTGGGI
Sbjct: 123  IEKAEDRELFKKAMEKIGVPVCPSGIANNLEEAKAIGHQIGSYPLIIRPAFTLGGTGGGI 182

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEFE + + GL  S TSQ+LVEKSL+GWKEYELEVMRDLADNVVIICSIEN D MG
Sbjct: 183  AYNQEEFEPMAQYGLDCSPTSQILVEKSLIGWKEYELEVMRDLADNVVIICSIENFDAMG 242

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQRLRDYS AIIREIGVE GGSN+QF+VNP +G+V+VIEMN
Sbjct: 243  VHTGDSITVAPAQTLTDKEYQRLRDYSKAIIREIGVETGGSNIQFSVNPTNGDVIVIEMN 302

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRF 447
            PRVSRSSALASKATGFPIAK AAKL+VGY+LD+IPNDITKKTPASFEP+IDYVVTKIPRF
Sbjct: 303  PRVSRSSALASKATGFPIAKFAAKLAVGYTLDEIPNDITKKTPASFEPTIDYVVTKIPRF 362

Query: 448  AFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDWE 507
            AFEKFPGS+P+LTTQMKSVGEAMA+GRTFQESFQKALRSLE G  G+GC  ++ L     
Sbjct: 363  AFEKFPGSQPILTTQMKSVGEAMAIGRTFQESFQKALRSLETGRFGFGCDKIETLP-PLS 421

Query: 508  QLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSVS 567
            +++ SLR PNP+R+ +IY A K GM  +EIHEL+ ID WFL +  +L++ E+FL    + 
Sbjct: 422  EVRASLRTPNPERVYSIYHAFKLGMNGEEIHELTGIDPWFLDKLADLMETEKFLKRTPLK 481

Query: 568  NMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTPY 627
            ++++++ + +K++GFSD+QIAFAT ++E EVR  R  LG++P YK VDTCAAEFEA TPY
Sbjct: 482  SLSQENLFAIKQQGFSDRQIAFATNTSEDEVRSYRKGLGIVPVYKMVDTCAAEFEALTPY 541

Query: 628  MYSSYD-FECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSN 686
             YS+Y+  E E  P+ K+KV+ILGGGPNRIGQGIEFDYCCCH +FSL  AG+ETIM+NSN
Sbjct: 542  YYSTYEQVESEVLPSDKRKVMILGGGPNRIGQGIEFDYCCCHAAFSLSQAGFETIMVNSN 601

Query: 687  PETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHR 746
            PETVSTDYDTSDRLYFEPLT EDVLN+I+ E+PEG+I+QFGGQTPLKL++P+ +YL+   
Sbjct: 602  PETVSTDYDTSDRLYFEPLTKEDVLNIIEAEQPEGLIIQFGGQTPLKLAVPLQKYLESPN 661

Query: 747  LPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEIG 806
             P  +     +IWGTSPDSID AEDRERF  I+++L I QP  GIA+S  ++ A+AK IG
Sbjct: 662  CPVNT-----KIWGTSPDSIDTAEDRERFEQILRQLDIRQPANGIARSFQESQAVAKRIG 716

Query: 807  YPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALAD 866
            YPVVVRPSYVLGGRAMEIVY+D  L  Y++ AV+++P+ P+LIDK+L +AIE+DVDAL+D
Sbjct: 717  YPVVVRPSYVLGGRAMEIVYSDSELERYMKYAVQIEPDHPILIDKFLENAIEVDVDALSD 776

Query: 867  SCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNC 926
            +   VVIGG+MEHIEQAGVHSGDSAC IP  ++S+S L TI  WT++LAK L V GLMN 
Sbjct: 777  ATETVVIGGLMEHIEQAGVHSGDSACSIPHTSLSASVLTTIRQWTVELAKALKVIGLMNI 836

Query: 927  QYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPKH 986
            QYA+     VY+LEANPRASRTVP+VSKA G PLAK A+LVMSG++L +LG   E IP+H
Sbjct: 837  QYAVQGE-TVYILEANPRASRTVPYVSKATGVPLAKVASLVMSGRTLTELGIISEAIPRH 895

Query: 987  VSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVFL 1046
            ++VKEAVLPF+KF G D LLGPEMRSTGEVMGID  F  AFAKA++AAG  L  SGTVF+
Sbjct: 896  IAVKEAVLPFQKFPGADTLLGPEMRSTGEVMGIDSDFGKAFAKAEMAAGVILATSGTVFV 955

Query: 1047 SLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIA-VERVLKMHEGRPHAGDMVA 1105
            S++D  K  +  + K    +GF++V+TSGT   L   G   ++ VLK+HEGRPH  D + 
Sbjct: 956  SMSDRDKIPMVPVVKDLQSLGFRVVATSGTREVLLENGCENIDLVLKIHEGRPHVIDWIK 1015

Query: 1106 NGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTVTMT 1165
            N  IQ +V T SG+   Q DG ++RR  L YK+P+ITT++GA A   A++SL+S  + + 
Sbjct: 1016 NDWIQFIVNTPSGEE-SQNDGRQIRRTALDYKLPIITTIAGAKATVAALKSLQSEPLEVK 1074

Query: 1166 ALQDFF 1171
            ALQD+ 
Sbjct: 1075 ALQDYL 1080


>gi|428768493|ref|YP_007160283.1| carbamoyl-phosphate synthase large subunit [Cyanobacterium aponinum
            PCC 10605]
 gi|428682772|gb|AFZ52239.1| carbamoyl-phosphate synthase large subunit [Cyanobacterium aponinum
            PCC 10605]
          Length = 1082

 Score = 1513 bits (3916), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 742/1088 (68%), Positives = 878/1088 (80%), Gaps = 13/1088 (1%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            +R D+ KIL+LG+GPI+IGQACEFDYSGTQACKAL+EEGYEV+L+NSNPATIMTDP  A+
Sbjct: 3    RREDINKILLLGSGPIIIGQACEFDYSGTQACKALREEGYEVVLVNSNPATIMTDPETAE 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
            RTYI P+TPE+VE+V+ KERPDALLPTMGGQTALN AVALAESG L KYGVELIGAKL A
Sbjct: 63   RTYIEPITPEIVEKVIAKERPDALLPTMGGQTALNTAVALAESGVLNKYGVELIGAKLPA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            IK AEDR+LFK+AM  IGV   PSGI +  +E  ++A EIG +PLIIRPAFT+GGTGGGI
Sbjct: 123  IKMAEDRELFKEAMARIGVPVCPSGIASNWEEAKAVAEEIGSYPLIIRPAFTMGGTGGGI 182

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EE+E + K G+ AS  SQ+LVEKSL+GWKEYELEVMRDLADNVVIICSIEN+DPMG
Sbjct: 183  AYNQEEYEEMAKFGIDASPVSQILVEKSLIGWKEYELEVMRDLADNVVIICSIENIDPMG 242

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQRLRDY+ AIIREIGVE GGSN+QF+VNPV+GEV+VIEMN
Sbjct: 243  VHTGDSITVAPAQTLTDKEYQRLRDYAKAIIREIGVETGGSNIQFSVNPVNGEVIVIEMN 302

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRF 447
            PRVSRSSALASKATGFPIAK AAKL+VGY+LD+I NDIT+KTPASFEP+IDYVVTKIPRF
Sbjct: 303  PRVSRSSALASKATGFPIAKFAAKLAVGYTLDEISNDITQKTPASFEPTIDYVVTKIPRF 362

Query: 448  AFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDWE 507
            AFEKFPGSEP+LTTQMKSVGEAMA+GRTF ESFQKALRSLE G  G+GC   + L     
Sbjct: 363  AFEKFPGSEPVLTTQMKSVGEAMAIGRTFCESFQKALRSLETGRYGFGCDKNETLP-TLS 421

Query: 508  QLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSVS 567
            Q+   LR PNP+R+ ++Y A K GM V+++ EL+ ID WFL + + L+++E+F+   S+ 
Sbjct: 422  QISSHLRTPNPERIFSVYHAFKLGMSVEQVFELTAIDPWFLDKMQSLVEIEKFMKRASLK 481

Query: 568  NMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTPY 627
            ++  DD   +K+ GFSD+QIAFATK+TE EVR  R SLG+ P YK VDTCAAEFEA TPY
Sbjct: 482  DIKADDMLTIKQHGFSDRQIAFATKTTEDEVRAYRKSLGITPVYKLVDTCAAEFEAFTPY 541

Query: 628  MYSSYDF-ECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSN 686
             YS+Y+  E E+  T K KV+ILGGGPNRIGQGIEFDYCCCH +F+L  AGYETIM+NSN
Sbjct: 542  YYSTYESGESENNVTDKPKVMILGGGPNRIGQGIEFDYCCCHAAFALSDAGYETIMVNSN 601

Query: 687  PETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHR 746
            PETVSTDYDTSDRLYFEPLT EDVLN+I+ E P+G+I+QFGGQTPLKL++P+  YL    
Sbjct: 602  PETVSTDYDTSDRLYFEPLTKEDVLNIIEAENPDGVIIQFGGQTPLKLAVPLKNYL---- 657

Query: 747  LPSASGDGLV--RIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKE 804
               A  D  V  +IWGTSPDSID AEDRE+F AI+KEL I+QP  GIA+S  +ALAIA  
Sbjct: 658  ---AHPDTTVKTKIWGTSPDSIDTAEDREKFEAILKELDIKQPPNGIARSFEEALAIANR 714

Query: 805  IGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDAL 864
            I YPVVVRPSYVLGGRAM IVY ++ L  Y+  AV+V+P+ P+LIDK+L +AIE+DVDA+
Sbjct: 715  ISYPVVVRPSYVLGGRAMRIVYNEQELEHYMTYAVDVEPDHPILIDKFLENAIEVDVDAI 774

Query: 865  ADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLM 924
            AD  G VVIGGIMEHIE+AGVHSGDSAC IP  ++S   L TI S TIKLA+ L V GLM
Sbjct: 775  ADLTGQVVIGGIMEHIEEAGVHSGDSACSIPYTSLSDGVLSTIRSATIKLAQSLKVIGLM 834

Query: 925  NCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIP 984
            N QYA+     VY+LEANPRASRTVP+VSKA G PLAK A+LVMSGK+L +LG T+E+IP
Sbjct: 835  NIQYAVQGE-TVYILEANPRASRTVPYVSKATGRPLAKVASLVMSGKTLEELGVTEEIIP 893

Query: 985  KHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTV 1044
            +HV+VKEAVLPF KF G D LLGPEMRSTGEVMGID  F  AFAKA+I AG  L   GTV
Sbjct: 894  RHVAVKEAVLPFSKFPGTDTLLGPEMRSTGEVMGIDSDFGKAFAKAEIGAGVILDTKGTV 953

Query: 1045 FLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIA-VERVLKMHEGRPHAGDM 1103
            F+S+N+  K  +  +AK    +GFKIV+TSGT   L   G+  V+ VLK+HEGRPH  D 
Sbjct: 954  FISMNNRDKGAIVSVAKDLQALGFKIVATSGTRQTLLENGVKDVDLVLKLHEGRPHVVDW 1013

Query: 1104 VANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTVT 1163
            + N QIQ ++ T S +   Q DG K+RR  L YK+P+ITT++GA A  EAIRSL+S  + 
Sbjct: 1014 IKNKQIQFIINTPSNEEETQTDGRKIRRAALDYKLPIITTIAGAKATVEAIRSLQSEPLQ 1073

Query: 1164 MTALQDFF 1171
            + ALQD+F
Sbjct: 1074 VKALQDYF 1081


>gi|425449218|ref|ZP_18829060.1| carbamoyl phosphate synthase, large subunit [Microcystis aeruginosa
            PCC 7941]
 gi|389764199|emb|CCI09429.1| carbamoyl phosphate synthase, large subunit [Microcystis aeruginosa
            PCC 7941]
          Length = 1081

 Score = 1513 bits (3916), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 734/1086 (67%), Positives = 887/1086 (81%), Gaps = 10/1086 (0%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            +R DL+KILILGAGPIVIGQACEFDYSGTQACKAL+EEGYEVIL+NSNPA+IMTDP +AD
Sbjct: 3    RRDDLKKILILGAGPIVIGQACEFDYSGTQACKALREEGYEVILVNSNPASIMTDPEMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
            RTYI P+ PE+VE+++ KERPDA+LPTMGGQTALN AVALA+SG LEKY VELIGAKL A
Sbjct: 63   RTYIEPILPEIVEKIIAKERPDAILPTMGGQTALNTAVALAKSGVLEKYNVELIGAKLPA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I+KAEDR+LFK+AM+ IGV   PSGI N L+E  +I ++IG +PLIIRPAFTLGGTGGGI
Sbjct: 123  IEKAEDRELFKKAMEKIGVPVCPSGIANNLEEAKAIGHQIGSYPLIIRPAFTLGGTGGGI 182

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEFE + + GL  S TSQ+LVEKSL+GWKEYELEVMRDLADNVVIICSIEN D MG
Sbjct: 183  AYNQEEFEPMAQYGLDCSPTSQILVEKSLIGWKEYELEVMRDLADNVVIICSIENFDAMG 242

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQRLRDYS AIIREIGVE GGSN+QF+VNP +G+V+VIEMN
Sbjct: 243  VHTGDSITVAPAQTLTDKEYQRLRDYSKAIIREIGVETGGSNIQFSVNPTNGDVIVIEMN 302

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRF 447
            PRVSRSSALASKATGFPIAK AAKL+VGY+LD+IPNDITKKTPASFEP+IDYVVTKIPRF
Sbjct: 303  PRVSRSSALASKATGFPIAKFAAKLAVGYTLDEIPNDITKKTPASFEPTIDYVVTKIPRF 362

Query: 448  AFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDWE 507
            AFEKFPGS+P+LTTQMKSVGEAMA+GRTFQESFQKALRSLE G  G+GC  V+ L     
Sbjct: 363  AFEKFPGSQPILTTQMKSVGEAMAIGRTFQESFQKALRSLETGRFGFGCDKVETLP-PLS 421

Query: 508  QLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSVS 567
            +++  LR PNP+R+ +IY A K GM  +EIHEL+ ID WFL +  +L++ E+FL    + 
Sbjct: 422  EVRAGLRTPNPERVYSIYHAFKLGMNGEEIHELTGIDPWFLDKLADLMETEKFLKRTPLK 481

Query: 568  NMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTPY 627
            ++ K+D + +K++GFSD+QIAFAT ++E EVR  R  LG++P YK VDTCAAEFEA TPY
Sbjct: 482  SLGKEDLFAIKQQGFSDRQIAFATNTSEDEVRSYRKGLGIVPVYKMVDTCAAEFEALTPY 541

Query: 628  MYSSYD-FECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSN 686
             YS+Y+  E E  P+ K+KV+ILGGGPNRIGQGIEFDYCCCH +FSL  AG+ETIM+NSN
Sbjct: 542  YYSTYERVESEVLPSDKRKVMILGGGPNRIGQGIEFDYCCCHAAFSLSQAGFETIMVNSN 601

Query: 687  PETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHR 746
            PETVSTDYDTSDRLYFEPLT EDVLN+I+ E+PEG+I+QFGGQTPLKL++P+ +YL+   
Sbjct: 602  PETVSTDYDTSDRLYFEPLTKEDVLNIIEAEQPEGLIIQFGGQTPLKLAVPLQKYLESPN 661

Query: 747  LPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEIG 806
             P  +     +IWGTSPDSIDAAEDRERF  I+++L I QP  GIA++  ++ A+A+ IG
Sbjct: 662  CPVNT-----KIWGTSPDSIDAAEDRERFEQILRQLDIRQPLNGIARNFQESQAVAQRIG 716

Query: 807  YPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALAD 866
            YPVVVRPSYVLGGRAMEIVY+D  L  Y++ AV+++P+ P+LIDK+L +AIE+DVDAL+D
Sbjct: 717  YPVVVRPSYVLGGRAMEIVYSDSELERYMKYAVQIEPDHPILIDKFLENAIEVDVDALSD 776

Query: 867  SCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNC 926
            + G VVIGG+MEHIEQAGVHSGDSAC IP  ++S+S L TI  WT++LAK L V GLMN 
Sbjct: 777  ATGTVVIGGLMEHIEQAGVHSGDSACSIPHTSLSASVLTTIRQWTVELAKALKVIGLMNI 836

Query: 927  QYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPKH 986
            QYA+     VY+LEANPRASRTVP+VSKA G PLAK A+LVMSGK+L +LG T E IP+H
Sbjct: 837  QYAVQGE-TVYILEANPRASRTVPYVSKATGVPLAKVASLVMSGKTLAELGITSEAIPRH 895

Query: 987  VSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVFL 1046
            ++VKEAVLPF+KF G D LLGPEMRSTGEVMGID  F  AFAKA++AAG  L  SGTVF+
Sbjct: 896  IAVKEAVLPFQKFPGADTLLGPEMRSTGEVMGIDSDFGKAFAKAEMAAGVILATSGTVFV 955

Query: 1047 SLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIA-VERVLKMHEGRPHAGDMVA 1105
            S++D  K  +  + K    +GF++V+TSGT   L   G   ++ VLK+HEGRP   D + 
Sbjct: 956  SMSDRDKTPMVPVVKDLQSLGFRVVATSGTRKVLLENGCENIDLVLKIHEGRPDVVDWIK 1015

Query: 1106 NGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTVTMT 1165
            N  IQ +V T SG+   Q DG K+RR  L YK+P+ITT++GA A   A++SL+S  + + 
Sbjct: 1016 NDWIQFIVNTPSGEE-SQNDGRKIRRTALDYKLPIITTIAGAKATVAALKSLQSQPLEVK 1074

Query: 1166 ALQDFF 1171
            ALQD+ 
Sbjct: 1075 ALQDYL 1080


>gi|119485029|ref|ZP_01619414.1| Carbamoyl-phosphate synthase, large subunit, glutamine-dependent
            [Lyngbya sp. PCC 8106]
 gi|119457257|gb|EAW38382.1| Carbamoyl-phosphate synthase, large subunit, glutamine-dependent
            [Lyngbya sp. PCC 8106]
          Length = 1079

 Score = 1513 bits (3916), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 729/1084 (67%), Positives = 887/1084 (81%), Gaps = 7/1084 (0%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            +R DL KIL+LG+GPIVIGQACEFDYSGTQACKAL+EEGYEV+L+NSNPATIMTDP  A+
Sbjct: 3    RREDLHKILLLGSGPIVIGQACEFDYSGTQACKALREEGYEVVLVNSNPATIMTDPETAE 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
            RTYI P+ PE+VE+V+EKERPDALLPTMGGQTALNLAVALA++G LEKYGVELIGAKL+A
Sbjct: 63   RTYIEPLVPEIVEKVIEKERPDALLPTMGGQTALNLAVALAKNGVLEKYGVELIGAKLEA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I+ AEDR LFKQAM+ IGV   PSGI + +DE  ++A +IG +PLIIRPAFT+GGTGGGI
Sbjct: 123  IEMAEDRQLFKQAMERIGVACCPSGIVSNMDEARTVAQQIGSYPLIIRPAFTMGGTGGGI 182

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EE+E +   GL AS  SQ+LVE+SL+GWKE+ELEVMRDLADNVVIICSIEN+DPMG
Sbjct: 183  AYNQEEYEELASGGLDASPVSQILVEQSLIGWKEFELEVMRDLADNVVIICSIENIDPMG 242

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQRLRD SI IIREIGVE GGSN+QFA+NPV+G+++VIEMN
Sbjct: 243  VHTGDSITVAPAQTLTDKEYQRLRDASIKIIREIGVETGGSNIQFAINPVNGDMIVIEMN 302

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRF 447
            PRVSRSSALASKATGFPIAK AAKLSVGY+LD+I NDITKKTPASFEP+IDYVVTKIPRF
Sbjct: 303  PRVSRSSALASKATGFPIAKFAAKLSVGYTLDEIKNDITKKTPASFEPTIDYVVTKIPRF 362

Query: 448  AFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDWE 507
            AFEKFPGS+P LTTQMKSVGEAMA+G TF ESFQKALRSLE G SGWGC   ++L    +
Sbjct: 363  AFEKFPGSKPTLTTQMKSVGEAMAIGGTFCESFQKALRSLETGLSGWGCDRSEKLP-SLD 421

Query: 508  QLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSVS 567
             +  SLR P+P+R+  +  A+  GM V+EI+EL+ ID WFL +F+E++D E+ L    + 
Sbjct: 422  NIAGSLRTPHPERILVVRHALMLGMSVEEIYELTGIDPWFLDKFQEILDTEKLLKRTPLK 481

Query: 568  NMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTPY 627
             +  D    +KR GFSD+QIA+ATK+ E EVR  RL L V P YK VDTCAAEFE+ TPY
Sbjct: 482  QLDADQLLAIKRLGFSDRQIAYATKTNEDEVRAYRLQLAVKPIYKMVDTCAAEFESRTPY 541

Query: 628  MYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSNP 687
             YS+Y  E E  P+ K KV+ILGGGPNRIGQGIEFDYCCCH S++L++ GYETIM+NSNP
Sbjct: 542  YYSTYWEEDEILPSDKPKVMILGGGPNRIGQGIEFDYCCCHASYALRANGYETIMVNSNP 601

Query: 688  ETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHRL 747
            ETVSTDYDTSDRLYFEPLT EDV+N+I+ E+P GII+QFGGQTPLKL++P+ +YL+ +  
Sbjct: 602  ETVSTDYDTSDRLYFEPLTKEDVINIIEAEKPVGIIIQFGGQTPLKLAIPLQKYLEAN-- 659

Query: 748  PSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEIGY 807
              A  +  ++IWGTSPDSIDAAEDRERF  I+++L+I+Q + G+A++   +L IA+ IGY
Sbjct: 660  --AEKNPDLKIWGTSPDSIDAAEDRERFEKILRQLNIQQAENGMARNFEQSLQIARRIGY 717

Query: 808  PVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALADS 867
            PVVVRPSYVLGGRAMEIVY+DE L  Y+  AV+++P+ P+L+DK+L +AIE+DVDA+AD 
Sbjct: 718  PVVVRPSYVLGGRAMEIVYSDEDLERYMMFAVQIEPDHPILVDKFLENAIEVDVDAIADQ 777

Query: 868  CGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNCQ 927
             G VVIGGIMEHIEQAGVHSGDSAC IP +T+  + ++TI   TI+LAK L V GLMN Q
Sbjct: 778  TGEVVIGGIMEHIEQAGVHSGDSACSIPYQTLPKTAVETIRRQTIELAKALKVVGLMNIQ 837

Query: 928  YAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPKHV 987
            +A+     VY+LEANPRASRTVPFVSKAIG PLAK A+LVMSGK+L +LGFT+E +P +V
Sbjct: 838  FAVQGE-QVYILEANPRASRTVPFVSKAIGIPLAKMASLVMSGKTLKELGFTEEKVPSYV 896

Query: 988  SVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVFLS 1047
            +VKEAVLPF KF G DVLLGPEMRSTGEVMGID  F  AFAKA++ AGQ LPLSGTVF+S
Sbjct: 897  AVKEAVLPFAKFPGTDVLLGPEMRSTGEVMGIDTEFGKAFAKAELGAGQVLPLSGTVFVS 956

Query: 1048 LNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVANG 1107
            +ND  K  +  I + FL++GFKI +T GT   L   G+ V+  LK+HEGRPH  D + N 
Sbjct: 957  MNDRDKTAVVPIVRDFLELGFKITATMGTRRVLWEHGVKVDLELKLHEGRPHVLDAMKNQ 1016

Query: 1108 QIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTVTMTAL 1167
             +Q+ +IT SG+   + DG+ +RR  LAYK+P+ITT++GA A    IR+LKS ++ + A+
Sbjct: 1017 NVQLAIITPSGEEA-RADGILIRRTALAYKIPIITTLAGARATVAGIRALKSESIGVKAI 1075

Query: 1168 QDFF 1171
            QD++
Sbjct: 1076 QDYY 1079


>gi|425455401|ref|ZP_18835121.1| carbamoyl phosphate synthase, large subunit [Microcystis aeruginosa
            PCC 9807]
 gi|389803714|emb|CCI17383.1| carbamoyl phosphate synthase, large subunit [Microcystis aeruginosa
            PCC 9807]
          Length = 1081

 Score = 1511 bits (3913), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 732/1088 (67%), Positives = 888/1088 (81%), Gaps = 10/1088 (0%)

Query: 86   LGKRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGL 145
            + +R DL+KILILGAGPIVIGQACEFDYSGTQACKAL+EEGYEVIL+NSNPA+IMTDP +
Sbjct: 1    MPRRDDLQKILILGAGPIVIGQACEFDYSGTQACKALREEGYEVILVNSNPASIMTDPEM 60

Query: 146  ADRTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKL 205
            ADRTYI P+ PE+VE+++EKERPDA+LPTMGGQTALN AVALA+SG LEKY VELIGAKL
Sbjct: 61   ADRTYIEPILPEIVEKIIEKERPDAILPTMGGQTALNTAVALAKSGVLEKYNVELIGAKL 120

Query: 206  DAIKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGG 265
             AI+KAEDR+LFK+AM+ IGV   PSGI N L+E  +I ++IG +PLIIRPAFTLGGTGG
Sbjct: 121  PAIEKAEDRELFKKAMEKIGVPVCPSGIANNLEEAKAIGHQIGSYPLIIRPAFTLGGTGG 180

Query: 266  GIAYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDP 325
            GIAYN+EEFE + + GL  S TSQ+LVEKSL+GWKEYELEVMRDLADNVVIICSIEN D 
Sbjct: 181  GIAYNQEEFEPMAEYGLDCSPTSQILVEKSLIGWKEYELEVMRDLADNVVIICSIENFDA 240

Query: 326  MGVHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIE 385
            MGVHTGDSITVAPAQTLTDKEYQRLRDYS AIIREIGVE GGSN+QF+VNP +G+V+VIE
Sbjct: 241  MGVHTGDSITVAPAQTLTDKEYQRLRDYSKAIIREIGVETGGSNIQFSVNPTNGDVIVIE 300

Query: 386  MNPRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIP 445
            MNPRVSRSSALASKATGFPIAK AAKL+VGY+LD+IPNDITKKTPASFEP+IDYVVTKIP
Sbjct: 301  MNPRVSRSSALASKATGFPIAKFAAKLAVGYTLDEIPNDITKKTPASFEPTIDYVVTKIP 360

Query: 446  RFAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWD 505
            RFAFEKFPGS+P+LTTQMKSVGEAMA+GRTFQESFQKALRSLE G  G+GC  ++ L   
Sbjct: 361  RFAFEKFPGSQPILTTQMKSVGEAMAIGRTFQESFQKALRSLETGRFGFGCDKIETLP-P 419

Query: 506  WEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQS 565
              +++ SLR PNP+R+ +IY A K GM  +EIHEL+ ID WFL +  +L++ E+FL    
Sbjct: 420  LSEVRASLRTPNPERVYSIYHAFKLGMNGEEIHELTGIDPWFLDKLADLMETEKFLKRTP 479

Query: 566  VSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANT 625
            + +++++D + +K++GFSD+QIAFAT ++E EVR  R  LG++P YK VDTCAAEFEA T
Sbjct: 480  LKSLSQEDLFAIKQQGFSDRQIAFATNTSEDEVRSYRKGLGIVPVYKMVDTCAAEFEALT 539

Query: 626  PYMYSSYD-FECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMN 684
            PY YS+Y+  E E  P+ K+KV+ILGGGPNRIGQGIEFDYCCCH +FSL  AG+ETIM+N
Sbjct: 540  PYYYSTYERVESEVLPSDKRKVMILGGGPNRIGQGIEFDYCCCHAAFSLSKAGFETIMVN 599

Query: 685  SNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDE 744
            SNPETVSTDYDTSDRLYFEPLT EDVLN+I+ E+PEG+I+QFGGQTPLKL++P+ +YL+ 
Sbjct: 600  SNPETVSTDYDTSDRLYFEPLTKEDVLNIIEAEQPEGLIIQFGGQTPLKLAVPLQKYLES 659

Query: 745  HRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKE 804
               P  +     +IWGTSPDSID AEDRERF  I+++L I QP  GIA+S  ++ A+AK 
Sbjct: 660  PNCPVNT-----KIWGTSPDSIDTAEDRERFEQILRQLDIRQPPNGIARSFQESQAVAKR 714

Query: 805  IGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDAL 864
            IGYPVVVRPSYVLGGRAMEIVY+D  L  Y++ AV+++P+ P+LIDK+L +AIE+DVDAL
Sbjct: 715  IGYPVVVRPSYVLGGRAMEIVYSDSELERYMKYAVQIEPDHPILIDKFLENAIEVDVDAL 774

Query: 865  ADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLM 924
            +D+   VVIGG+MEHIEQAGVHSGDSAC IP  ++S+S L TI  WT++LAK L V GLM
Sbjct: 775  SDATETVVIGGLMEHIEQAGVHSGDSACSIPHTSLSASVLTTIRQWTVELAKALKVIGLM 834

Query: 925  NCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIP 984
            N QYA+     VY+LEANPRASRTVP+VSKA G PLAK A+LVMSG++L +LG   E IP
Sbjct: 835  NIQYAVQGE-TVYILEANPRASRTVPYVSKATGVPLAKVASLVMSGRTLTELGIISEAIP 893

Query: 985  KHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTV 1044
            +H++VKEAVLPF+KF G D LLGPEMRSTGEVMGID  F  AFAKA++AAG  L  SGTV
Sbjct: 894  RHIAVKEAVLPFQKFPGADTLLGPEMRSTGEVMGIDSDFGKAFAKAEMAAGVILATSGTV 953

Query: 1045 FLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIA-VERVLKMHEGRPHAGDM 1103
            F+S++D  K  +  + K    +GF++V+TSGT   L   G   ++ VLK+HEGRP   D 
Sbjct: 954  FVSMSDRDKTPMVPVVKDLQSLGFRVVATSGTRKVLLENGCENIDLVLKIHEGRPDVVDW 1013

Query: 1104 VANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTVT 1163
            + N  IQ +V T SG+   Q DG K+RR  L YK+P+ITT++GA A   A++SL+S  + 
Sbjct: 1014 IKNDWIQFIVNTPSGEE-SQNDGRKIRRTALDYKLPIITTIAGAKATVAALKSLQSQPLE 1072

Query: 1164 MTALQDFF 1171
            + ALQD+ 
Sbjct: 1073 VKALQDYL 1080


>gi|298490013|ref|YP_003720190.1| carbamoyl-phosphate synthase large subunit ['Nostoc azollae' 0708]
 gi|298231931|gb|ADI63067.1| carbamoyl-phosphate synthase, large subunit ['Nostoc azollae' 0708]
          Length = 1094

 Score = 1511 bits (3912), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 726/1090 (66%), Positives = 888/1090 (81%), Gaps = 9/1090 (0%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            +R D+RKIL+LG+GPIVIGQACEFDYSGTQACKAL+EEGYEV+L+NSNPATIMTDP  AD
Sbjct: 3    RRQDIRKILLLGSGPIVIGQACEFDYSGTQACKALREEGYEVVLVNSNPATIMTDPETAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
            RTYI P+TPELV +V+EKERPDALLPTMGGQTALNLAVAL+++G L+KY VELIGAKL A
Sbjct: 63   RTYIEPLTPELVAKVIEKERPDALLPTMGGQTALNLAVALSKNGVLDKYNVELIGAKLPA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I+KAE+R LF +AM  IGV   PSG  ++L+E   IA+ IG +PLIIRPAFT+GGTGGGI
Sbjct: 123  IEKAENRKLFNEAMGKIGVPVCPSGTASSLEESKEIAHHIGTYPLIIRPAFTMGGTGGGI 182

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEFE + + G+ AS  SQ+L+++SLLGWKEYELEVMRDLADNVVIICSIEN DPMG
Sbjct: 183  AYNQEEFELMAQVGIDASPVSQILIDQSLLGWKEYELEVMRDLADNVVIICSIENFDPMG 242

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            +HTGDSITVAPAQTLTDKEYQRLRD +I IIREIGVE GGSN+QFAVNPV+G+V+VIEMN
Sbjct: 243  IHTGDSITVAPAQTLTDKEYQRLRDMAIKIIREIGVETGGSNIQFAVNPVNGDVVVIEMN 302

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRF 447
            PRVSRSSALASKATGFPIA +AAKL+VGY+LD+I NDITK+TPASFEP+IDYVV KIPRF
Sbjct: 303  PRVSRSSALASKATGFPIAGIAAKLAVGYTLDEIKNDITKQTPASFEPTIDYVVIKIPRF 362

Query: 448  AFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDWE 507
            AFEKFPGS+ +LTTQMKSVGEAMA+GRTF ESFQKALRSLE G +GWGC   ++L    E
Sbjct: 363  AFEKFPGSDSVLTTQMKSVGEAMAIGRTFNESFQKALRSLETGRAGWGCDKSEKLP-SAE 421

Query: 508  QLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSVS 567
            Q++  LR PNP+R+ A+  AM+ G+  +EI+EL+ ID WFL + +++++VE+FL    + 
Sbjct: 422  QIRAQLRTPNPERVYALRHAMQLGITNEEIYELTAIDPWFLDKLQQILEVEKFLKRTPLQ 481

Query: 568  NMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTPY 627
             +TK+  YEVKR GFSD+QIA+ATK+ E EVR  R  LG+ P YK VDTCAAEFEA TPY
Sbjct: 482  QLTKEKMYEVKRNGFSDRQIAYATKTKEDEVRAYRQKLGIKPVYKTVDTCAAEFEAFTPY 541

Query: 628  MYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSNP 687
             YS+Y+ E E  PT K KV+ILGGGPNRIGQGIEFDYCCCH ++SL++AGYETIM+NSNP
Sbjct: 542  YYSTYEEETEVLPTDKPKVMILGGGPNRIGQGIEFDYCCCHAAYSLKAAGYETIMVNSNP 601

Query: 688  ETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHR- 746
            ETVSTDYDTSDRLYFEPLT EDV+N+I+ E P GIIVQFGGQTPLKL++P+ QYL     
Sbjct: 602  ETVSTDYDTSDRLYFEPLTKEDVINIIEAENPVGIIVQFGGQTPLKLAIPLQQYLQGRSC 661

Query: 747  --LPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKE 804
                S+S   + +IWGTSPDSID AE+RERF  I++EL+I QP  GIA+S  DAL +AK 
Sbjct: 662  QSPVSSSQSPVPQIWGTSPDSIDMAENRERFENILQELNIAQPPNGIARSYEDALIVAKR 721

Query: 805  IGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDAL 864
            IGYPVVVRPSYVLGGR MEIVY+D  L  Y+  AV+V+PE P+LIDK+L +AIE+DVDA+
Sbjct: 722  IGYPVVVRPSYVLGGRGMEIVYSDAELERYMTFAVQVEPEHPILIDKFLENAIEVDVDAI 781

Query: 865  ADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLM 924
            AD  G VVIGGIMEHIEQAG+HSGDSAC +P+ ++S + L+ I +WT++LA+ L+V GLM
Sbjct: 782  ADYTGKVVIGGIMEHIEQAGIHSGDSACSLPSISLSPAVLNQIRTWTVQLAQALSVVGLM 841

Query: 925  NCQYAIT----TSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTK 980
            N Q+A+      S  VY+LEANPRASRTVPFVSKA G PLAK A+L+MSGK+L +L FT+
Sbjct: 842  NIQFAVVGANGYSPQVYILEANPRASRTVPFVSKATGIPLAKLASLIMSGKTLEELNFTQ 901

Query: 981  EVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPL 1040
            EVIP H++VKEAVLPF KF G D LLGPEMRSTGEVMGID  F  AFAKA++ AG+KLP 
Sbjct: 902  EVIPSHIAVKEAVLPFNKFPGTDTLLGPEMRSTGEVMGIDADFGRAFAKAELGAGEKLPR 961

Query: 1041 SGTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHA 1100
             G+VF+S++D  K     + K F+ +GF I++T GT   L+  G+ V+ +LK+HEGRPH 
Sbjct: 962  KGSVFVSMSDRDKGAAIEVVKEFISLGFTIIATQGTRQVLQQNGVKVDLILKLHEGRPHV 1021

Query: 1101 GDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSN 1160
             D + N +IQ+++ T SG+   Q D   +RR GLAYK+P+ITT++GA A   AIRSL++ 
Sbjct: 1022 LDAIKNEKIQLIINTPSGEEA-QTDARLIRRTGLAYKIPIITTIAGARATVAAIRSLQNT 1080

Query: 1161 TVTMTALQDF 1170
            T+ +  +Q++
Sbjct: 1081 TLDVKVIQEY 1090


>gi|161344753|ref|NP_442333.2| carbamoyl phosphate synthase large subunit [Synechocystis sp. PCC
            6803]
 gi|383323347|ref|YP_005384201.1| carbamoyl-phosphate synthase,pyrimidine-specific, large chain
            [Synechocystis sp. PCC 6803 substr. GT-I]
 gi|383326516|ref|YP_005387370.1| carbamoyl-phosphate synthase,pyrimidine-specific, large chain
            [Synechocystis sp. PCC 6803 substr. PCC-P]
 gi|383492400|ref|YP_005410077.1| carbamoyl-phosphate synthase,pyrimidine-specific, large chain
            [Synechocystis sp. PCC 6803 substr. PCC-N]
 gi|384437668|ref|YP_005652393.1| carbamoyl-phosphate synthase,pyrimidine-specific, large chain
            [Synechocystis sp. PCC 6803]
 gi|22095495|sp|Q55756.2|CARB_SYNY3 RecName: Full=Carbamoyl-phosphate synthase large chain; AltName:
            Full=Carbamoyl-phosphate synthetase ammonia chain
 gi|339274701|dbj|BAK51188.1| carbamoyl-phosphate synthase,pyrimidine-specific, large chain
            [Synechocystis sp. PCC 6803]
 gi|359272667|dbj|BAL30186.1| carbamoyl-phosphate synthase,pyrimidine-specific, large chain
            [Synechocystis sp. PCC 6803 substr. GT-I]
 gi|359275837|dbj|BAL33355.1| carbamoyl-phosphate synthase,pyrimidine-specific, large chain
            [Synechocystis sp. PCC 6803 substr. PCC-N]
 gi|359279007|dbj|BAL36524.1| carbamoyl-phosphate synthase,pyrimidine-specific, large chain
            [Synechocystis sp. PCC 6803 substr. PCC-P]
          Length = 1081

 Score = 1509 bits (3907), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 732/1087 (67%), Positives = 878/1087 (80%), Gaps = 12/1087 (1%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            +R DL KI+ILGAGPIVIGQACEFDYSGTQACKALKEEGYEV+L+NSNPA+IMTDP LAD
Sbjct: 3    RRNDLNKIMILGAGPIVIGQACEFDYSGTQACKALKEEGYEVVLVNSNPASIMTDPELAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
            RTYI P+ PE+VE+++EKERPDA+LPTMGGQTALNLAV+L++SG LEKYGVELIGAKL A
Sbjct: 63   RTYIEPLIPEIVEKIIEKERPDAVLPTMGGQTALNLAVSLSKSGVLEKYGVELIGAKLPA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I+  EDR+LFK+AM  IGV   PSGI ++++E   +A+EIG +PLIIRPAFTL GTGGGI
Sbjct: 123  IEMGEDRELFKEAMARIGVPVCPSGIASSIEEARQVAHEIGSYPLIIRPAFTLAGTGGGI 182

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EE+E + + GL  S  SQ+LVEKSLLGWKEYELEVMRDLADNVVIICSIEN DPMG
Sbjct: 183  AYNQEEYEEMVQYGLDQSPMSQILVEKSLLGWKEYELEVMRDLADNVVIICSIENFDPMG 242

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVE GGSN+QF+VNP +G+V+VIEMN
Sbjct: 243  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVETGGSNIQFSVNPANGDVIVIEMN 302

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRF 447
            PRVSRSSALASKATGFPIAK AAKL+VGY+L++I NDITKKTPASFEP+IDYVVTKIPRF
Sbjct: 303  PRVSRSSALASKATGFPIAKFAAKLAVGYTLNEISNDITKKTPASFEPTIDYVVTKIPRF 362

Query: 448  AFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDWE 507
            AFEKFPG+EP+L TQMKSVGEAMA+GRTFQESFQKALRSLE G  G+GC   + L     
Sbjct: 363  AFEKFPGAEPILNTQMKSVGEAMAIGRTFQESFQKALRSLETGRFGFGCDRHETLP-TLS 421

Query: 508  QLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSVS 567
             L+  LR PNP+R+ +++ A   GM V+EIHEL+ ID WFL + ++L+  E+++  +S+ 
Sbjct: 422  HLRSQLRTPNPERVFSLHHAFNLGMTVEEIHELTAIDPWFLDKLEDLVKTEKYMKQRSLK 481

Query: 568  NMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTPY 627
            ++T  D   +K++GF D+QIAFATK+TE EVR  R SLG+ P YK VDTCAAEFEA TPY
Sbjct: 482  DLTAADLRYIKQQGFGDRQIAFATKTTEDEVRAYRKSLGITPVYKVVDTCAAEFEAFTPY 541

Query: 628  MYSSYD-FECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSN 686
             YS+Y+  ECE  P+ K KV+ILGGGPNRIGQGIEFDYCCCH +FSL  AGYETIM+NSN
Sbjct: 542  YYSTYEPEECEVLPSDKPKVMILGGGPNRIGQGIEFDYCCCHAAFSLSDAGYETIMVNSN 601

Query: 687  PETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHR 746
            PETVSTDYDTSDRLYFEPLT EDVLN+I+ E P GII+QFGGQTPLKL++P+ +YL+   
Sbjct: 602  PETVSTDYDTSDRLYFEPLTKEDVLNIIEAENPVGIIIQFGGQTPLKLAVPLQKYLNSPD 661

Query: 747  LPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEIG 806
             P  +     +IWGTSPDSID AEDRERF  I+ EL I QP  GIA+   ++  +A  I 
Sbjct: 662  CPVQT-----KIWGTSPDSIDTAEDRERFEKILHELEISQPPNGIARDYEESRVVANRIS 716

Query: 807  YPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALAD 866
            YPVVVRPSYVLGGRAMEIVY+DE L  Y+  AV+++P+ P+LIDK+L +AIE+DVD+L D
Sbjct: 717  YPVVVRPSYVLGGRAMEIVYSDEELERYMTYAVQIEPDHPILIDKFLENAIEVDVDSLTD 776

Query: 867  SCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNC 926
            S G VVIG IMEHIE+AG+HSGDSAC IP  ++S + L TI  WT +LA+ LNV GLMN 
Sbjct: 777  STGKVVIGSIMEHIEEAGIHSGDSACSIPYTSLSDNVLTTIRQWTEQLARALNVVGLMNI 836

Query: 927  QYAITTSGD-VYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPK 985
            QYA+   GD VY+LEANPRASRTVP+VSKA G PLAK A+LVMSGK+L +LG T+E IP+
Sbjct: 837  QYAV--QGDQVYILEANPRASRTVPYVSKATGRPLAKIASLVMSGKTLEELGVTEEFIPQ 894

Query: 986  HVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVF 1045
            HV+VKEAVLPF KF G D LLGPEMRSTGEVMGID  F  AFAKA++ AG  L  +GTVF
Sbjct: 895  HVAVKEAVLPFSKFPGADTLLGPEMRSTGEVMGIDSDFGKAFAKAELGAGVILATTGTVF 954

Query: 1046 LSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGI-AVERVLKMHEGRPHAGDMV 1104
            +S++D TK     + +  +D+GFK+V+TSGT   L   GI  VE VLK+HEGRPH  D +
Sbjct: 955  VSMSDRTKEAAVPVVRELIDLGFKVVATSGTQKVLREHGIEGVEVVLKLHEGRPHVIDWI 1014

Query: 1105 ANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTVTM 1164
             NGQIQ ++ T SG+   Q+DG  +RR  L YK+P+ITT++G  A   A+RSL+ + + +
Sbjct: 1015 KNGQIQFIINTPSGEE-SQLDGRTIRRAALDYKLPIITTIAGGKATVAALRSLQDHPLDV 1073

Query: 1165 TALQDFF 1171
             ALQD+ 
Sbjct: 1074 KALQDYL 1080


>gi|451815757|ref|YP_007452209.1| carbamoyl-phosphate synthase, pyrimidine-specific, large chain
            [Synechocystis sp. PCC 6803]
 gi|1001668|dbj|BAA10403.1| carbamoyl-phosphate synthase, pyrimidine-specific, large chain
            [Synechocystis sp. PCC 6803]
 gi|407960764|dbj|BAM54004.1| carbamoyl phosphate synthase large subunit [Synechocystis sp. PCC
            6803]
 gi|451781726|gb|AGF52695.1| carbamoyl-phosphate synthase, pyrimidine-specific, large chain
            [Synechocystis sp. PCC 6803]
          Length = 1105

 Score = 1509 bits (3907), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 732/1087 (67%), Positives = 878/1087 (80%), Gaps = 12/1087 (1%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            +R DL KI+ILGAGPIVIGQACEFDYSGTQACKALKEEGYEV+L+NSNPA+IMTDP LAD
Sbjct: 27   RRNDLNKIMILGAGPIVIGQACEFDYSGTQACKALKEEGYEVVLVNSNPASIMTDPELAD 86

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
            RTYI P+ PE+VE+++EKERPDA+LPTMGGQTALNLAV+L++SG LEKYGVELIGAKL A
Sbjct: 87   RTYIEPLIPEIVEKIIEKERPDAVLPTMGGQTALNLAVSLSKSGVLEKYGVELIGAKLPA 146

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I+  EDR+LFK+AM  IGV   PSGI ++++E   +A+EIG +PLIIRPAFTL GTGGGI
Sbjct: 147  IEMGEDRELFKEAMARIGVPVCPSGIASSIEEARQVAHEIGSYPLIIRPAFTLAGTGGGI 206

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EE+E + + GL  S  SQ+LVEKSLLGWKEYELEVMRDLADNVVIICSIEN DPMG
Sbjct: 207  AYNQEEYEEMVQYGLDQSPMSQILVEKSLLGWKEYELEVMRDLADNVVIICSIENFDPMG 266

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVE GGSN+QF+VNP +G+V+VIEMN
Sbjct: 267  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVETGGSNIQFSVNPANGDVIVIEMN 326

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRF 447
            PRVSRSSALASKATGFPIAK AAKL+VGY+L++I NDITKKTPASFEP+IDYVVTKIPRF
Sbjct: 327  PRVSRSSALASKATGFPIAKFAAKLAVGYTLNEISNDITKKTPASFEPTIDYVVTKIPRF 386

Query: 448  AFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDWE 507
            AFEKFPG+EP+L TQMKSVGEAMA+GRTFQESFQKALRSLE G  G+GC   + L     
Sbjct: 387  AFEKFPGAEPILNTQMKSVGEAMAIGRTFQESFQKALRSLETGRFGFGCDRHETLP-TLS 445

Query: 508  QLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSVS 567
             L+  LR PNP+R+ +++ A   GM V+EIHEL+ ID WFL + ++L+  E+++  +S+ 
Sbjct: 446  HLRSQLRTPNPERVFSLHHAFNLGMTVEEIHELTAIDPWFLDKLEDLVKTEKYMKQRSLK 505

Query: 568  NMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTPY 627
            ++T  D   +K++GF D+QIAFATK+TE EVR  R SLG+ P YK VDTCAAEFEA TPY
Sbjct: 506  DLTAADLRYIKQQGFGDRQIAFATKTTEDEVRAYRKSLGITPVYKVVDTCAAEFEAFTPY 565

Query: 628  MYSSYD-FECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSN 686
             YS+Y+  ECE  P+ K KV+ILGGGPNRIGQGIEFDYCCCH +FSL  AGYETIM+NSN
Sbjct: 566  YYSTYEPEECEVLPSDKPKVMILGGGPNRIGQGIEFDYCCCHAAFSLSDAGYETIMVNSN 625

Query: 687  PETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHR 746
            PETVSTDYDTSDRLYFEPLT EDVLN+I+ E P GII+QFGGQTPLKL++P+ +YL+   
Sbjct: 626  PETVSTDYDTSDRLYFEPLTKEDVLNIIEAENPVGIIIQFGGQTPLKLAVPLQKYLNSPD 685

Query: 747  LPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEIG 806
             P  +     +IWGTSPDSID AEDRERF  I+ EL I QP  GIA+   ++  +A  I 
Sbjct: 686  CPVQT-----KIWGTSPDSIDTAEDRERFEKILHELEISQPPNGIARDYEESRVVANRIS 740

Query: 807  YPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALAD 866
            YPVVVRPSYVLGGRAMEIVY+DE L  Y+  AV+++P+ P+LIDK+L +AIE+DVD+L D
Sbjct: 741  YPVVVRPSYVLGGRAMEIVYSDEELERYMTYAVQIEPDHPILIDKFLENAIEVDVDSLTD 800

Query: 867  SCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNC 926
            S G VVIG IMEHIE+AG+HSGDSAC IP  ++S + L TI  WT +LA+ LNV GLMN 
Sbjct: 801  STGKVVIGSIMEHIEEAGIHSGDSACSIPYTSLSDNVLTTIRQWTEQLARALNVVGLMNI 860

Query: 927  QYAITTSGD-VYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPK 985
            QYA+   GD VY+LEANPRASRTVP+VSKA G PLAK A+LVMSGK+L +LG T+E IP+
Sbjct: 861  QYAV--QGDQVYILEANPRASRTVPYVSKATGRPLAKIASLVMSGKTLEELGVTEEFIPQ 918

Query: 986  HVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVF 1045
            HV+VKEAVLPF KF G D LLGPEMRSTGEVMGID  F  AFAKA++ AG  L  +GTVF
Sbjct: 919  HVAVKEAVLPFSKFPGADTLLGPEMRSTGEVMGIDSDFGKAFAKAELGAGVILATTGTVF 978

Query: 1046 LSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGI-AVERVLKMHEGRPHAGDMV 1104
            +S++D TK     + +  +D+GFK+V+TSGT   L   GI  VE VLK+HEGRPH  D +
Sbjct: 979  VSMSDRTKEAAVPVVRELIDLGFKVVATSGTQKVLREHGIEGVEVVLKLHEGRPHVIDWI 1038

Query: 1105 ANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTVTM 1164
             NGQIQ ++ T SG+   Q+DG  +RR  L YK+P+ITT++G  A   A+RSL+ + + +
Sbjct: 1039 KNGQIQFIINTPSGEE-SQLDGRTIRRAALDYKLPIITTIAGGKATVAALRSLQDHPLDV 1097

Query: 1165 TALQDFF 1171
             ALQD+ 
Sbjct: 1098 KALQDYL 1104


>gi|443318255|ref|ZP_21047515.1| carbamoyl-phosphate synthase, large subunit [Leptolyngbya sp. PCC
            6406]
 gi|442782142|gb|ELR92222.1| carbamoyl-phosphate synthase, large subunit [Leptolyngbya sp. PCC
            6406]
          Length = 1089

 Score = 1509 bits (3906), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 734/1084 (67%), Positives = 880/1084 (81%), Gaps = 3/1084 (0%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            +R DL+KIL++G+GPIVIGQACEFDYSGTQACKAL+EEGYEV+L+NSNPATIMTDP  AD
Sbjct: 3    RRNDLKKILLVGSGPIVIGQACEFDYSGTQACKALREEGYEVVLVNSNPATIMTDPETAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
            RTYI P+TPELV QV+E+ERPDA+LPTMGGQTALN+AV LA+SG LEKYGVELIGAKL+A
Sbjct: 63   RTYIEPLTPELVAQVIERERPDAMLPTMGGQTALNIAVDLAQSGVLEKYGVELIGAKLEA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I+KAEDR LFK+AM  IG+   PSG+  TL E  ++A +IG FPLIIRPAFT+GG GGGI
Sbjct: 123  IQKAEDRKLFKEAMTRIGIAVCPSGLAETLAEARTVAAQIGSFPLIIRPAFTMGGAGGGI 182

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN EEFE I ++GL AS  SQ+L+E+SLLGWKEYELEVMRDLADNVVIICSIENVDPMG
Sbjct: 183  AYNHEEFEQIAQSGLDASPMSQILIEQSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 242

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            +HTGDSITVAPAQTLTDKEYQRLRD SI IIREIGVE GGSN+QFAVNP DG V+VIEMN
Sbjct: 243  IHTGDSITVAPAQTLTDKEYQRLRDASIQIIREIGVETGGSNIQFAVNPEDGAVIVIEMN 302

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRF 447
            PRVSRSSALASKATGFPIAK AAKL+VGY+LD+IPNDIT+KTPASFEP+IDYVVTKIPRF
Sbjct: 303  PRVSRSSALASKATGFPIAKFAAKLAVGYTLDEIPNDITQKTPASFEPTIDYVVTKIPRF 362

Query: 448  AFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDWE 507
            AFEKFPG+ P+LTTQMKSVGEAMA+GRTFQESFQKALRSLE G +GWGC   + L  +  
Sbjct: 363  AFEKFPGTPPILTTQMKSVGEAMAIGRTFQESFQKALRSLETGRAGWGCDRRETLP-NLS 421

Query: 508  QLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSVS 567
             L+  LR PNP+R+ A++ AM+ G+ + EI++L+ ID WFL Q   L+  E++L    ++
Sbjct: 422  SLRSQLRTPNPERIFAVHHAMQLGLDLGEIYQLTGIDPWFLHQLAGLLKTEKWLKRTPLA 481

Query: 568  NMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTPY 627
            +M+    Y VKR+GFSD+QIAFA    E  VR  R SLGV P YK VDTCAAEFEA TPY
Sbjct: 482  SMSGAQMYAVKRQGFSDRQIAFANGINEDTVRAYRQSLGVNPVYKTVDTCAAEFEAYTPY 541

Query: 628  MYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSNP 687
             YS+Y+ E E  P+ ++KV+ILGGGPNRIGQGIEFDYCCCH SF+LQ+ G+ETIM+NSNP
Sbjct: 542  YYSTYEEETEVLPSDRRKVMILGGGPNRIGQGIEFDYCCCHASFALQADGFETIMVNSNP 601

Query: 688  ETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHRL 747
            ETVSTDYDTSDRLYFEPLT EDVLN+I+ E+PEGIIVQFGGQTPLKL++P+  YL +   
Sbjct: 602  ETVSTDYDTSDRLYFEPLTKEDVLNIIEAEQPEGIIVQFGGQTPLKLAVPLQTYLAKIAT 661

Query: 748  PSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEIGY 807
                   + +IWGTSPDSID AEDRERF  I++EL I QP  GIA+S  +AL IA  I Y
Sbjct: 662  HGDESRPVTQIWGTSPDSIDMAEDRERFEKILRELDILQPANGIARSYDEALRIAHTINY 721

Query: 808  PVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALADS 867
            PVVVRPSYVLGGRAMEIVY+D  L  Y+ +AV+V+P+ P+LID +L +AIE+DVDA+AD+
Sbjct: 722  PVVVRPSYVLGGRAMEIVYSDRELDHYMTHAVQVEPDHPILIDLFLENAIEVDVDAIADA 781

Query: 868  CGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNCQ 927
             G VVIGGIMEHIEQAG+HSGDSAC +PT T+  + L TI +WT+KLA+RL V GLMN Q
Sbjct: 782  TGAVVIGGIMEHIEQAGIHSGDSACSLPTITLPEAALTTIRNWTVKLAQRLKVVGLMNIQ 841

Query: 928  YAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPKHV 987
            +A+     VY+LEANPRASRTVPFVSK  G PLAK A  VM+GK+L +LG T+E+IP+H+
Sbjct: 842  FAVKGE-QVYILEANPRASRTVPFVSKTTGRPLAKLAVQVMAGKTLAELGITEEIIPRHI 900

Query: 988  SVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVFLS 1047
            +VKEAVLPF++F G D +LGPEMRSTGEVMGID  F  AFAKA++ A QKLPL+GTVF+S
Sbjct: 901  AVKEAVLPFDRFPGTDTILGPEMRSTGEVMGIDTDFGKAFAKAELGANQKLPLAGTVFIS 960

Query: 1048 LNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVANG 1107
            +ND  K  +  +A+  + +GF +++TSGT   L+  GIAV+ VLK+HEGRPH GD + N 
Sbjct: 961  MNDRDKEAVVPVAQDLVSLGFTLMATSGTRAVLQDHGIAVDLVLKIHEGRPHIGDQIKNS 1020

Query: 1108 QIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTVTMTAL 1167
            QIQ+++ T  GD   Q D   +RR  LAYK+P ITT++ A A A AIRSL+   +T+ AL
Sbjct: 1021 QIQLIINTPVGDKAQQ-DDRAIRRAALAYKIPTITTIAAARATAAAIRSLQQAGLTVRAL 1079

Query: 1168 QDFF 1171
            QD+ 
Sbjct: 1080 QDYL 1083


>gi|254416184|ref|ZP_05029939.1| carbamoyl-phosphate synthase, large subunit [Coleofasciculus
            chthonoplastes PCC 7420]
 gi|196177117|gb|EDX72126.1| carbamoyl-phosphate synthase, large subunit [Coleofasciculus
            chthonoplastes PCC 7420]
          Length = 1072

 Score = 1508 bits (3905), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 717/1074 (66%), Positives = 887/1074 (82%), Gaps = 6/1074 (0%)

Query: 98   LGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLADRTYITPMTPE 157
            +G+GPIVIGQACEFDYSGTQACKAL++EGYEV+L+NSNPATIMTDP  ADRTYI P+TPE
Sbjct: 1    MGSGPIVIGQACEFDYSGTQACKALQQEGYEVVLVNSNPATIMTDPETADRTYIEPLTPE 60

Query: 158  LVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDAIKKAEDRDLF 217
            +VE+V+ KERPDALLPTMGGQTALN+AV LA++G L+KYGV+LIGAKLDAI+ AEDR LF
Sbjct: 61   IVEKVIAKERPDALLPTMGGQTALNIAVTLAKNGVLDKYGVDLIGAKLDAIEMAEDRQLF 120

Query: 218  KQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGIAYNKEEFEAI 277
            K+AM  IG+   PSGI + LDE  ++A  IG +PLIIRPA+TLGGTGGGIAYN+EE+E +
Sbjct: 121  KEAMGRIGIGVCPSGIASNLDEAKALAQRIGTYPLIIRPAYTLGGTGGGIAYNQEEYEEM 180

Query: 278  CKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMGVHTGDSITVA 337
             +AGL AS  SQ+LVE+SLLGWKEYELEVMRDLADNVVIICSIEN+DPMGVHTGDSITVA
Sbjct: 181  AQAGLDASPVSQILVEQSLLGWKEYELEVMRDLADNVVIICSIENLDPMGVHTGDSITVA 240

Query: 338  PAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMNPRVSRSSALA 397
            PAQTLTDKEYQRLRDYSI IIREIGVE GGSN+QFA+NPV G+V+VIEMNPRVSRSSALA
Sbjct: 241  PAQTLTDKEYQRLRDYSIQIIREIGVETGGSNIQFAINPVSGDVIVIEMNPRVSRSSALA 300

Query: 398  SKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRFAFEKFPGSEP 457
            SKATGFPIAK AAKL+VGY+LD+IPNDIT+KTPASFEP+IDYVVTKIPRF FEKFP ++P
Sbjct: 301  SKATGFPIAKFAAKLAVGYTLDEIPNDITQKTPASFEPTIDYVVTKIPRFTFEKFPNAQP 360

Query: 458  LLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDWEQLKYSLRVPN 517
            +LTTQMKSVGEAMA+GRTFQES QKALRSLE G  GWGC   ++L    EQ++  LR PN
Sbjct: 361  VLTTQMKSVGEAMAIGRTFQESCQKALRSLEIGRYGWGCDRAEKLP-SLEQVRSGLRTPN 419

Query: 518  PDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSVSNMTKDDFYEV 577
            PDR+  +  A++ GM V+EI+EL+ ID WFL +F +L++ E+FL    + ++TK++ + +
Sbjct: 420  PDRIFTLRHALQLGMTVEEIYELTSIDPWFLDKFADLLETEKFLKRTPLKSLTKENLWYI 479

Query: 578  KRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTPYMYSSYDFECE 637
            KR+G+SD+QIAFATK+TE EVR  R  LGV+  YK VDTCAAEFEA TPY YS+Y+ E E
Sbjct: 480  KRQGYSDRQIAFATKTTEDEVRTYRKQLGVVAVYKVVDTCAAEFEALTPYYYSTYEEETE 539

Query: 638  SAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSNPETVSTDYDTS 697
              P+ K+KV+ILGGGPNRIGQGIEFDYCCCH +++L   G+ETIM+NSNPETVSTDYDTS
Sbjct: 540  VIPSDKRKVMILGGGPNRIGQGIEFDYCCCHAAYALAKQGFETIMVNSNPETVSTDYDTS 599

Query: 698  DRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHRLPSASGDGLVR 757
            DRLYFEPLT EDVLN+I+ E+PEGII+QFGGQTPLKL++P+ ++L+   +P++      +
Sbjct: 600  DRLYFEPLTKEDVLNIIETEKPEGIIIQFGGQTPLKLAVPLQEFLNNPEIPTSVP---TK 656

Query: 758  IWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEIGYPVVVRPSYVL 817
            IWGTSPDSID AEDRERF  I+++L I+QP  GIA+S  +AL IAK IGYPVVVRPSYVL
Sbjct: 657  IWGTSPDSIDIAEDRERFEKILRQLDIKQPPNGIARSYEEALNIAKRIGYPVVVRPSYVL 716

Query: 818  GGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALADSCGNVVIGGIM 877
            GGRAMEIVY+D  L  Y+  AV+V+PE P+LIDK+L +AIE+DVDA+AD  G VVIGGIM
Sbjct: 717  GGRAMEIVYSDLELERYMTFAVQVEPEHPILIDKFLENAIEVDVDAIADHTGRVVIGGIM 776

Query: 878  EHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNCQYAITTSGDVY 937
            EHIEQAG+HSGDSAC IP  ++S + ++TI + T +LA +L V GLMN Q+A+     VY
Sbjct: 777  EHIEQAGIHSGDSACSIPFISLSPTAMETIRTSTHQLATKLKVIGLMNIQFAVQGE-TVY 835

Query: 938  LLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPKHVSVKEAVLPFE 997
            +LEANPRASRTVP+VSKA G PLA  A+ +M+G++L DLG T+E I +H++VKEAVLPF+
Sbjct: 836  ILEANPRASRTVPYVSKATGVPLAALASRIMAGETLEDLGLTREPILQHIAVKEAVLPFD 895

Query: 998  KFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVFLSLNDLTKPHLE 1057
            KF G DV+LGPEMRSTGEVMGID  F  AFAKA++AAGQ+LPLSGTVF+S N+  K ++ 
Sbjct: 896  KFPGTDVILGPEMRSTGEVMGIDTDFGKAFAKAELAAGQRLPLSGTVFVSTNNRDKANVV 955

Query: 1058 RIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVANGQIQMMVITSS 1117
             + +  +D+GF +++T GT   L+ +G+ V+ +LK+H+GRPH  D + N QIQ+++ T +
Sbjct: 956  PVVQDLMDLGFNVIATEGTRKALKDQGLEVDLILKLHQGRPHVLDAIKNKQIQLIINTPT 1015

Query: 1118 GDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTVTMTALQDFF 1171
            G+   Q DG  +RR  LAYK+P++TT++GA A A AIRSLKS  + + ALQD+ 
Sbjct: 1016 GEDA-QADGRLIRRTALAYKIPIVTTIAGAKATAGAIRSLKSEPLDVKALQDYI 1068



 Score =  237 bits (604), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 138/399 (34%), Positives = 225/399 (56%), Gaps = 18/399 (4%)

Query: 90  TDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLADRT 149
           +D RK++ILG GP  IGQ  EFDY    A  AL ++G+E I++NSNP T+ TD   +DR 
Sbjct: 543 SDKRKVMILGGGPNRIGQGIEFDYCCCHAAYALAKQGFETIMVNSNPETVSTDYDTSDRL 602

Query: 150 YITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAE----SGALEKYGVELIGAKL 205
           Y  P+T E V  ++E E+P+ ++   GGQT L LAV L E             ++ G   
Sbjct: 603 YFEPLTKEDVLNIIETEKPEGIIIQFGGQTPLKLAVPLQEFLNNPEIPTSVPTKIWGTSP 662

Query: 206 DAIKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGG 265
           D+I  AEDR+ F++ ++ + +K PP+GI  + +E ++IA  IG +P+++RP++ LGG   
Sbjct: 663 DSIDIAEDRERFEKILRQLDIKQPPNGIARSYEEALNIAKRIG-YPVVVRPSYVLGGRAM 721

Query: 266 GIAYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDP 325
            I Y+  E E      +       +L++K L    E +++ + D    VVI   +E+++ 
Sbjct: 722 EIVYSDLELERYMTFAVQVEPEHPILIDKFLENAIEVDVDAIADHTGRVVIGGIMEHIEQ 781

Query: 326 MGVHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGE-VMVI 384
            G+H+GDS    P  +L+    + +R  +  +  ++ V  G  N+QFAV    GE V ++
Sbjct: 782 AGIHSGDSACSIPFISLSPTAMETIRTSTHQLATKLKV-IGLMNIQFAVQ---GETVYIL 837

Query: 385 EMNPRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKI 444
           E NPR SR+    SKATG P+A +A+++  G +L+ +   +T+      EP + ++  K 
Sbjct: 838 EANPRASRTVPYVSKATGVPLAALASRIMAGETLEDL--GLTR------EPILQHIAVKE 889

Query: 445 PRFAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKA 483
               F+KFPG++ +L  +M+S GE M +   F ++F KA
Sbjct: 890 AVLPFDKFPGTDVILGPEMRSTGEVMGIDTDFGKAFAKA 928


>gi|409990526|ref|ZP_11273888.1| carbamoyl phosphate synthase large subunit [Arthrospira platensis
            str. Paraca]
 gi|409938609|gb|EKN79911.1| carbamoyl phosphate synthase large subunit [Arthrospira platensis
            str. Paraca]
          Length = 1077

 Score = 1508 bits (3904), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 732/1084 (67%), Positives = 883/1084 (81%), Gaps = 10/1084 (0%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            +R DL+KIL+LG+GPIVIGQACEFDYSGTQACKAL+EEGY+V+L+NSNPATIMTDP  A 
Sbjct: 3    RRNDLKKILLLGSGPIVIGQACEFDYSGTQACKALREEGYDVVLVNSNPATIMTDPETAR 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
            RTYI P+TPE+VE+V+E ERPDALLPTMGGQTALN+AVAL+++G L+KYGVELIGAKLDA
Sbjct: 63   RTYIEPLTPEIVEKVIEAERPDALLPTMGGQTALNIAVALSKNGVLDKYGVELIGAKLDA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I+KAEDR LFKQAM+ IGV   PSGI N L+E  +IA +IG +PLIIRPAFT+GGTGGGI
Sbjct: 123  IEKAEDRLLFKQAMEKIGVACCPSGIANNLNEARAIAEQIGTYPLIIRPAFTMGGTGGGI 182

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EE+E +   GL AS  SQ+LVE+SL+GWKEYELEVMRDLADNVVIICSIEN+DPMG
Sbjct: 183  AYNQEEYEELAMGGLDASPMSQILVEQSLIGWKEYELEVMRDLADNVVIICSIENLDPMG 242

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQRLRD +I IIREIGVE GGSN+QF+VNPV+G+V+VIEMN
Sbjct: 243  VHTGDSITVAPAQTLTDKEYQRLRDAAIKIIREIGVETGGSNIQFSVNPVNGDVIVIEMN 302

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRF 447
            PRVSRSSALASKATGFPIAK AAKLSVGY+LD+I NDITKKTPASFEP+IDYVVTKIPRF
Sbjct: 303  PRVSRSSALASKATGFPIAKFAAKLSVGYTLDEISNDITKKTPASFEPTIDYVVTKIPRF 362

Query: 448  AFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDWE 507
             FEKFPG+EP+LTTQMKSVGEAMA+G TF ESFQKA+RSLE G +GWG  N  E     +
Sbjct: 363  TFEKFPGAEPVLTTQMKSVGEAMAIGGTFCESFQKAMRSLETGLAGWGL-NTNEKVPSLD 421

Query: 508  QLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSVS 567
             ++  LR PNPDRM  +   M  GM V+EI+EL+ ID WFL + ++L++ E+FL    V+
Sbjct: 422  TIRSGLRTPNPDRMITLRYGMLLGMSVEEIYELTGIDPWFLDKLQQLLETEKFLKRTPVT 481

Query: 568  NMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTPY 627
             +  DD   +KR+GFSD+QIAFA+++TE EVR+ R  LGV P+YK VDTCAAEFE+ TPY
Sbjct: 482  EINHDDMLAIKRQGFSDRQIAFASQTTEDEVRKYRKGLGVKPAYKMVDTCAAEFESTTPY 541

Query: 628  MYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSNP 687
             YS+Y  E E   + + KV+ILGGGPNRIGQGIEFDYCCCH S+SL+  GY TIM+NSNP
Sbjct: 542  YYSTYWEEDEMISSDRPKVMILGGGPNRIGQGIEFDYCCCHASYSLRDDGYITIMVNSNP 601

Query: 688  ETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHRL 747
            ETVSTDYDTSDRLYFEPLT EDV N+I+ E P GII+QFGGQTPLKL++P+ + L E  L
Sbjct: 602  ETVSTDYDTSDRLYFEPLTKEDVFNIIEAEEPLGIIIQFGGQTPLKLAVPLEKALSESTL 661

Query: 748  PSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEIGY 807
             +       +IWGTSPDSID AEDRERF  I++EL+I+Q   G+A+S  +ALA+A  IGY
Sbjct: 662  KT-------KIWGTSPDSIDTAEDRERFEKILRELNIQQAANGMARSYEEALAVAGRIGY 714

Query: 808  PVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALADS 867
            PVVVRPSYVLGGRAMEIVY+DE L  Y+  AV V+P+ P+L+DK+L +A+E+DVDA+AD 
Sbjct: 715  PVVVRPSYVLGGRAMEIVYSDEELERYMTFAVLVEPDHPILVDKFLENAVEVDVDAIADH 774

Query: 868  CGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNCQ 927
             GNVVIGGIMEHIEQAG+HSGDSAC IPT+T+S + L TI   TI+LAK LNV GLMN Q
Sbjct: 775  TGNVVIGGIMEHIEQAGIHSGDSACSIPTQTLSETVLATIRRQTIQLAKALNVVGLMNIQ 834

Query: 928  YAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPKHV 987
            +A+     VY+LEANPRASRTVPFVSKAIG PLAK A+ VMSGK+L +LG+T+E IP +V
Sbjct: 835  FAVQGE-QVYILEANPRASRTVPFVSKAIGIPLAKMASRVMSGKTLAELGYTQEKIPDYV 893

Query: 988  SVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVFLS 1047
            SVKEAVLPF KF G DVLLGPEMRSTGEVMGID  F  AFAKA++AAGQ +P+SGTVF+S
Sbjct: 894  SVKEAVLPFAKFPGTDVLLGPEMRSTGEVMGIDTEFGRAFAKAELAAGQVIPMSGTVFVS 953

Query: 1048 LNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVANG 1107
            +ND  K  +  + + FLD+GFK+ +T  T   L   G+ V+  LK+HEGRP+  D + N 
Sbjct: 954  VNDRDKEAIVPVVQDFLDLGFKVTATINTRKVLWEHGVKVDLELKLHEGRPNVLDAIKNH 1013

Query: 1108 QIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTVTMTAL 1167
             +Q+ +IT SG S  + DG+ +RR  LAYKVP+ITT++GA A   A+RSL+ + + + AL
Sbjct: 1014 AVQLAIITPSG-SEARADGITIRRSALAYKVPIITTIAGAKATISALRSLQKHPLDVKAL 1072

Query: 1168 QDFF 1171
            QD++
Sbjct: 1073 QDYY 1076


>gi|425459509|ref|ZP_18838995.1| carbamoyl phosphate synthase, large subunit [Microcystis aeruginosa
            PCC 9808]
 gi|389822752|emb|CCI29540.1| carbamoyl phosphate synthase, large subunit [Microcystis aeruginosa
            PCC 9808]
          Length = 1081

 Score = 1508 bits (3904), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 729/1086 (67%), Positives = 886/1086 (81%), Gaps = 10/1086 (0%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            +R DL+KILILGAGPIVIGQACEFDYSGTQACKAL+EEGYEVIL+NSNPA+IMTDP +AD
Sbjct: 3    RRDDLKKILILGAGPIVIGQACEFDYSGTQACKALREEGYEVILVNSNPASIMTDPEMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
            RTYI P+ PE+VE+++ KERPDA+LPTMGGQTALN AVALA+SG LEKY VELIGAKL A
Sbjct: 63   RTYIEPILPEIVEKIIAKERPDAILPTMGGQTALNTAVALAKSGVLEKYNVELIGAKLPA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I+KAEDR+LFK+AM+ IGV   PSGI N L+E  +I ++IG +PLIIRPAFTLGGTGGGI
Sbjct: 123  IEKAEDRELFKKAMEKIGVPVCPSGIANNLEEAKAIGHQIGSYPLIIRPAFTLGGTGGGI 182

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEFE + + GL  S TSQ+LVEKSL+GWKEYELEVMRDLADNVVIICSIEN D MG
Sbjct: 183  AYNQEEFEPMAQYGLDCSPTSQILVEKSLIGWKEYELEVMRDLADNVVIICSIENFDAMG 242

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQRLRDYS AIIREIGVE GGSN+QF+VNP +G+V+VIEMN
Sbjct: 243  VHTGDSITVAPAQTLTDKEYQRLRDYSKAIIREIGVETGGSNIQFSVNPTNGDVIVIEMN 302

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRF 447
            PRVSRSSALASKATGFPIAK AAKL+VGY+LD+IPNDITKKTPASFEP+IDYVVTKIPRF
Sbjct: 303  PRVSRSSALASKATGFPIAKFAAKLAVGYTLDEIPNDITKKTPASFEPTIDYVVTKIPRF 362

Query: 448  AFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDWE 507
            AFEKFPGS+P+LTTQMKSVGEAMA+GRTFQESFQKALRSLE G  G+GC  ++ L     
Sbjct: 363  AFEKFPGSQPILTTQMKSVGEAMAIGRTFQESFQKALRSLETGRFGFGCDKIETLP-PLS 421

Query: 508  QLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSVS 567
            +++  LR PNP+R+ +IY A K GM  +EIHEL+ ID WFL +  +L++ E+FL    + 
Sbjct: 422  EVRAGLRTPNPERVYSIYHAFKLGMNGEEIHELTGIDPWFLDKLADLMETEKFLKRTPLK 481

Query: 568  NMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTPY 627
            ++++++ + +K++GFSD+QIAFAT ++E EVR  R  LG++P YK VDTCAAEFEA TPY
Sbjct: 482  SLSQENLFAIKQQGFSDRQIAFATNTSEDEVRSYRKGLGIVPVYKMVDTCAAEFEALTPY 541

Query: 628  MYSSYD-FECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSN 686
             YS+Y+  E E  P+ K+KV+ILGGGPNRIGQGIEFDYCCCH +FSL  AG+ETIM+NSN
Sbjct: 542  YYSTYERVESEVLPSDKRKVMILGGGPNRIGQGIEFDYCCCHAAFSLSKAGFETIMVNSN 601

Query: 687  PETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHR 746
            PETVSTDYDTSDRLYFEPLT EDVLN+I+ E+PEG+I+QFGGQTPLKL++P+ +YL+   
Sbjct: 602  PETVSTDYDTSDRLYFEPLTKEDVLNIIEAEQPEGLIIQFGGQTPLKLAVPLQKYLESPN 661

Query: 747  LPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEIG 806
             P  +     +IWGTSPDSID AEDRERF  I+++L I QP  GIA+S  ++ A+A+ IG
Sbjct: 662  CPVNT-----KIWGTSPDSIDTAEDRERFEQILRQLDIRQPPNGIARSFQESQAVAQRIG 716

Query: 807  YPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALAD 866
            YPVVVRPSYVLGGRAMEIVY+D  L  Y++ AV+++P+ P+LIDK+L +AIE+DVDAL+D
Sbjct: 717  YPVVVRPSYVLGGRAMEIVYSDSELERYMKYAVQIEPDHPILIDKFLENAIEVDVDALSD 776

Query: 867  SCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNC 926
            +   VVIGG+MEHIEQAGVHSGDSAC IP  ++S+S L TI  WT++LAK L V GLMN 
Sbjct: 777  ATETVVIGGLMEHIEQAGVHSGDSACSIPHTSLSASVLTTIRQWTVELAKALKVIGLMNI 836

Query: 927  QYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPKH 986
            QYA+     VY+LEANPRASRTVP+VSKA G PLAK A+LVMSGK+L +LG   E IP+H
Sbjct: 837  QYAVQGE-TVYILEANPRASRTVPYVSKATGVPLAKVASLVMSGKTLTELGIISEAIPRH 895

Query: 987  VSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVFL 1046
            ++VKEAVLPF+KF G D LLGPEMRSTGEVMGID  F  AFAKA++AAG  L  SGTVF+
Sbjct: 896  IAVKEAVLPFQKFPGADTLLGPEMRSTGEVMGIDSDFGKAFAKAEMAAGVILATSGTVFV 955

Query: 1047 SLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIA-VERVLKMHEGRPHAGDMVA 1105
            S++D  K  +  + K    +GF++V+TSGT   L   G   ++ VLK+HEGRPH  D + 
Sbjct: 956  SMSDRDKTPMVPVVKDLQSLGFRVVATSGTRKVLLENGCENIDLVLKIHEGRPHVIDWIK 1015

Query: 1106 NGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTVTMT 1165
            N  IQ +V T SG+   Q DG ++RR  L YK+P+ITT++GA A   A++SL+S  + + 
Sbjct: 1016 NDWIQFIVNTPSGEE-SQNDGRQIRRTALDYKLPIITTIAGAKATVAALKSLQSQPLEVK 1074

Query: 1166 ALQDFF 1171
            ALQD+ 
Sbjct: 1075 ALQDYL 1080


>gi|291570064|dbj|BAI92336.1| carbamoyl-phosphate synthase large subunit [Arthrospira platensis
            NIES-39]
          Length = 1077

 Score = 1507 bits (3902), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 731/1084 (67%), Positives = 883/1084 (81%), Gaps = 10/1084 (0%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            +R DL+KIL+LG+GPIVIGQACEFDYSGTQACKAL+EEGY+V+L+NSNPATIMTDP  A 
Sbjct: 3    RRNDLKKILLLGSGPIVIGQACEFDYSGTQACKALREEGYDVVLVNSNPATIMTDPETAR 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
            RTYI P+TPE+VE+V+E ERPDALLPTMGGQTALN+AVAL+++G L+KYGVELIGAKLDA
Sbjct: 63   RTYIEPLTPEIVEKVIEAERPDALLPTMGGQTALNIAVALSKNGVLDKYGVELIGAKLDA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I+KAEDR LFKQAM+ IGV   PSGI N L+E  +IA +IG +PLIIRPAFT+GGTGGGI
Sbjct: 123  IEKAEDRLLFKQAMEKIGVACCPSGIANNLNEARAIAEQIGTYPLIIRPAFTMGGTGGGI 182

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EE+E +   GL AS  SQ+LVE+SL+GWKEYELEVMRDLADNVVIICSIEN+DPMG
Sbjct: 183  AYNQEEYEELAMGGLDASPMSQILVEQSLIGWKEYELEVMRDLADNVVIICSIENLDPMG 242

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQRLRD +I IIREIGVE GGSN+QF+VNPV+G+V+VIEMN
Sbjct: 243  VHTGDSITVAPAQTLTDKEYQRLRDAAIKIIREIGVETGGSNIQFSVNPVNGDVIVIEMN 302

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRF 447
            PRVSRSSALASKATGFPIAK AAKLSVGY+LD+I NDITKKTPASFEP+IDYVVTKIPRF
Sbjct: 303  PRVSRSSALASKATGFPIAKFAAKLSVGYTLDEISNDITKKTPASFEPTIDYVVTKIPRF 362

Query: 448  AFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDWE 507
             FEKFPG+EP+LTTQMKSVGEAMA+G TF ESFQKA+RSLE G +GWG  N  E     +
Sbjct: 363  TFEKFPGAEPVLTTQMKSVGEAMAIGGTFCESFQKAMRSLETGLAGWGL-NTNEKVPSLD 421

Query: 508  QLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSVS 567
             ++  LR PNPDRM  +   M  GM V+EI+EL+ ID WFL + ++L++ E+FL    V+
Sbjct: 422  TIRSGLRTPNPDRMITLRYGMLLGMSVEEIYELTGIDPWFLDKLQQLLETEKFLKRTPVT 481

Query: 568  NMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTPY 627
             +  DD   +KR+GFSD+QIAFA+++TE EVR+ R  LGV P+YK VDTCAAEFE+ TPY
Sbjct: 482  EINHDDMLAIKRQGFSDRQIAFASQTTEDEVRKYRKGLGVKPAYKMVDTCAAEFESTTPY 541

Query: 628  MYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSNP 687
             YS+Y  E E   + + KV+ILGGGPNRIGQGIEFDYCCCH S+SL+  GY TIM+NSNP
Sbjct: 542  YYSTYWEEDEMISSDRPKVMILGGGPNRIGQGIEFDYCCCHASYSLRDDGYITIMVNSNP 601

Query: 688  ETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHRL 747
            ETVSTDYDTSDRLYFEPLT EDV N+I+ E P GI++QFGGQTPLKL++P+ + L E  L
Sbjct: 602  ETVSTDYDTSDRLYFEPLTKEDVFNIIEAEEPLGIVIQFGGQTPLKLAVPLEKALSESTL 661

Query: 748  PSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEIGY 807
             +       +IWGTSPDSID AEDRERF  I++EL+I+Q   G+A+S  +ALA+A  IGY
Sbjct: 662  KT-------KIWGTSPDSIDTAEDRERFEKILRELNIQQAANGMARSYEEALAVAGRIGY 714

Query: 808  PVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALADS 867
            PVVVRPSYVLGGRAMEIVY+DE L  Y+  AV V+P+ P+L+DK+L +A+E+DVDA+AD 
Sbjct: 715  PVVVRPSYVLGGRAMEIVYSDEELERYMTFAVLVEPDHPILVDKFLENAVEVDVDAIADH 774

Query: 868  CGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNCQ 927
             GNVVIGGIMEHIEQAG+HSGDSAC IPT+T+S + L TI   TI+LAK LNV GLMN Q
Sbjct: 775  TGNVVIGGIMEHIEQAGIHSGDSACSIPTQTLSETVLATIRRQTIQLAKALNVVGLMNIQ 834

Query: 928  YAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPKHV 987
            +A+     VY+LEANPRASRTVPFVSKAIG PLAK A+ VMSGK+L +LG+T+E IP +V
Sbjct: 835  FAVQGE-QVYILEANPRASRTVPFVSKAIGIPLAKMASRVMSGKTLAELGYTQEKIPDYV 893

Query: 988  SVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVFLS 1047
            SVKEAVLPF KF G DVLLGPEMRSTGEVMGID  F  AFAKA++AAGQ +P+SGTVF+S
Sbjct: 894  SVKEAVLPFAKFPGTDVLLGPEMRSTGEVMGIDTEFGRAFAKAELAAGQVIPMSGTVFVS 953

Query: 1048 LNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVANG 1107
            +ND  K  +  + + FLD+GFK+ +T  T   L   G+ V+  LK+HEGRP+  D + N 
Sbjct: 954  VNDRDKEAIVPVVQDFLDLGFKVTATINTRKVLWEHGVKVDLELKLHEGRPNVLDAIKNH 1013

Query: 1108 QIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTVTMTAL 1167
             +Q+ +IT SG S  + DG+ +RR  LAYKVP+ITT++GA A   A+RSL+ + + + AL
Sbjct: 1014 AVQLAIITPSG-SEARADGITIRRSALAYKVPIITTIAGAKATISALRSLQKHPLDVKAL 1072

Query: 1168 QDFF 1171
            QD++
Sbjct: 1073 QDYY 1076


>gi|423064851|ref|ZP_17053641.1| carbamoyl-phosphate synthase large subunit [Arthrospira platensis C1]
 gi|406714094|gb|EKD09262.1| carbamoyl-phosphate synthase large subunit [Arthrospira platensis C1]
          Length = 1077

 Score = 1507 bits (3902), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 732/1084 (67%), Positives = 884/1084 (81%), Gaps = 10/1084 (0%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            +R DL+KIL+LG+GPIVIGQACEFDYSGTQACKAL+EEGY+V+L+NSNPATIMTDP  A 
Sbjct: 3    RRDDLKKILLLGSGPIVIGQACEFDYSGTQACKALREEGYDVVLVNSNPATIMTDPETAR 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
            RTYI P+TPE+VE+V+E ERPDALLPTMGGQTALN+AVAL+++G L+KYGVELIGAKLDA
Sbjct: 63   RTYIEPLTPEIVEKVIEAERPDALLPTMGGQTALNIAVALSKNGVLDKYGVELIGAKLDA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I+KAEDR LFKQAM+ IGV   PSGI N L+E  +IA +IG +PLIIRPAFT+GGTGGGI
Sbjct: 123  IEKAEDRLLFKQAMEKIGVGCCPSGIANNLNEARAIAEQIGSYPLIIRPAFTMGGTGGGI 182

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EE+E +  AGL AS  SQ+LVE+SL+GWKEYELEVMRDLADNVVIICSIEN+DPMG
Sbjct: 183  AYNQEEYEELAIAGLDASPMSQILVEQSLIGWKEYELEVMRDLADNVVIICSIENLDPMG 242

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQRLRD +I IIREIGVE GGSN+QF+VNPV+G+V+VIEMN
Sbjct: 243  VHTGDSITVAPAQTLTDKEYQRLRDAAIKIIREIGVETGGSNIQFSVNPVNGDVIVIEMN 302

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRF 447
            PRVSRSSALASKATGFPIAK AAKLSVGY+LD+I NDITKKTPASFEP+IDYVVTKIPRF
Sbjct: 303  PRVSRSSALASKATGFPIAKFAAKLSVGYTLDEISNDITKKTPASFEPTIDYVVTKIPRF 362

Query: 448  AFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDWE 507
             FEKFPG+EP+LTTQMKSVGEAMA+G TF ESFQKA+RSLE G +GWG  N  E     +
Sbjct: 363  TFEKFPGAEPVLTTQMKSVGEAMAIGGTFCESFQKAMRSLETGLAGWGL-NTNEKVPSLD 421

Query: 508  QLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSVS 567
             ++  LR PNPDRM  +  AM  GM V+EI+EL+ ID WFL + ++L++ E+FL     +
Sbjct: 422  TIRSGLRTPNPDRMLTLRYAMLLGMSVEEIYELTGIDPWFLDKLQQLLETEKFLKRTPFN 481

Query: 568  NMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTPY 627
             +  +D   +KR+GFSD+QIAFA+++TE EVR+ R  LGV P+YK VDTCAAEFE+ TPY
Sbjct: 482  QINHEDMLAIKRQGFSDRQIAFASQTTEDEVRKYRKGLGVKPAYKMVDTCAAEFESTTPY 541

Query: 628  MYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSNP 687
             YS+Y  E E  P+ + KV+ILGGGPNRIGQGIEFDYCCCH S+SL+  GY TIM+NSNP
Sbjct: 542  YYSTYWEEDEMIPSDRPKVMILGGGPNRIGQGIEFDYCCCHASYSLRDDGYITIMVNSNP 601

Query: 688  ETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHRL 747
            ETVSTDYDTSDRLYFEPLT EDV N+I+ E P GI++QFGGQTPLKL++P+ + L E  L
Sbjct: 602  ETVSTDYDTSDRLYFEPLTKEDVFNIIEAEEPLGIVIQFGGQTPLKLAVPLEKALSESTL 661

Query: 748  PSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEIGY 807
             +       +IWGTSPDSID AEDRERF  I++EL+I+Q   G+A+S  +ALA+A  IGY
Sbjct: 662  KT-------KIWGTSPDSIDTAEDRERFEKILRELNIQQAANGMARSYEEALAVAGRIGY 714

Query: 808  PVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALADS 867
            PVVVRPSYVLGGRAMEIVY+DE L  Y+  AV V+P+ P+L+DK+L +A+E+DVDA+AD 
Sbjct: 715  PVVVRPSYVLGGRAMEIVYSDEELERYMTFAVLVEPDHPILVDKFLENAVEVDVDAIADH 774

Query: 868  CGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNCQ 927
             GNVVIGGIMEHIEQAG+HSGDSAC IPT+T+S + L TI   TI+LAK LNV GLMN Q
Sbjct: 775  TGNVVIGGIMEHIEQAGIHSGDSACSIPTQTLSETVLATIRRQTIQLAKALNVVGLMNIQ 834

Query: 928  YAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPKHV 987
            +A+     VY+LEANPRASRTVPFVSKAIG PLAK A+ VMSGK+L +LG+T+E IP +V
Sbjct: 835  FAVQGE-QVYILEANPRASRTVPFVSKAIGIPLAKMASRVMSGKTLAELGYTQEKIPDYV 893

Query: 988  SVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVFLS 1047
            SVKEAVLPF KF G DVLLGPEMRSTGEVMGID  F  AFAKA++AAGQ +P+SGTVF+S
Sbjct: 894  SVKEAVLPFAKFPGTDVLLGPEMRSTGEVMGIDTEFGRAFAKAELAAGQVIPMSGTVFVS 953

Query: 1048 LNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVANG 1107
            +ND  K  +  + + FLD+GFK+ +T  T   L   G+ V+  LK+HEGRP+  D + N 
Sbjct: 954  VNDRDKEAIVPVVQDFLDLGFKVTATINTRKVLWEHGVKVDLELKLHEGRPNVLDAIKNH 1013

Query: 1108 QIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTVTMTAL 1167
             +Q+ +IT SG S  + DG+ +RR  LAYKVP+ITT++GA A   A+RSL+   + + AL
Sbjct: 1014 AVQLAIITPSG-SEARADGIMIRRSALAYKVPIITTIAGAKATISALRSLQQRPLDVKAL 1072

Query: 1168 QDFF 1171
            QD++
Sbjct: 1073 QDYY 1076


>gi|427725863|ref|YP_007073140.1| carbamoyl-phosphate synthase large subunit [Leptolyngbya sp. PCC
            7376]
 gi|427357583|gb|AFY40306.1| carbamoyl-phosphate synthase large subunit [Leptolyngbya sp. PCC
            7376]
          Length = 1081

 Score = 1507 bits (3901), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 732/1086 (67%), Positives = 873/1086 (80%), Gaps = 10/1086 (0%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            +R D++KILILG+GPIVIGQACEFDYSGTQ+CKAL+EEGYEV+L+NSNPATIMTDP  AD
Sbjct: 3    RREDIKKILILGSGPIVIGQACEFDYSGTQSCKALREEGYEVVLVNSNPATIMTDPETAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
            RTY+ P+TPE+VE+V+ KERPDALLPTMGGQTALN AV+LA++GAL+KY VELIGAKL+A
Sbjct: 63   RTYVEPITPEIVEKVIAKERPDALLPTMGGQTALNTAVSLAKNGALDKYNVELIGAKLEA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I+ AEDRDLFKQAM  IGV   PSGI +T++E   +A EIG +PLIIRPAFT+GG+GGGI
Sbjct: 123  IEMAEDRDLFKQAMARIGVPVCPSGIASTMEEGKEVAAEIGSYPLIIRPAFTMGGSGGGI 182

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EE+E ICK+GL AS  SQ+LVEKSLLGWKEYELEVMRDLADNVVIICSIEN+DPMG
Sbjct: 183  AYNQEEYEKICKSGLEASPVSQILVEKSLLGWKEYELEVMRDLADNVVIICSIENIDPMG 242

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            +HTGDSITVAPAQTLTDKEYQRLRDYS+ IIREIGVE GGSN+QF+VNP++G+V+VIEMN
Sbjct: 243  IHTGDSITVAPAQTLTDKEYQRLRDYSLKIIREIGVETGGSNIQFSVNPLNGDVIVIEMN 302

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRF 447
            PRVSRSSALASKATGFPIAK AAKL+VGY+LD+IPNDITK+TPASFEP+IDYVVTKIPRF
Sbjct: 303  PRVSRSSALASKATGFPIAKFAAKLAVGYTLDEIPNDITKQTPASFEPTIDYVVTKIPRF 362

Query: 448  AFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDWE 507
            AFEKFPGSEP LTTQMKSVGEAMA+GRTFQESFQKALRSLE G  G+GC   KE   +  
Sbjct: 363  AFEKFPGSEPTLTTQMKSVGEAMAIGRTFQESFQKALRSLETGRYGFGCDR-KETLPNLS 421

Query: 508  QLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSVS 567
            Q+  SLR PNP+R+  +Y A+K GM V+EIH+L+ ID WFL +  EL+  E+F+   +++
Sbjct: 422  QISTSLRTPNPERIFTVYQALKLGMTVEEIHDLTAIDIWFLDKMAELLVTERFMKQTALT 481

Query: 568  NMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTPY 627
            ++  +D   +K++GFSD+QIAFATK+ E  VR  R  +GV P YK VDTCAAEFEA TPY
Sbjct: 482  DIAAEDMRVIKQQGFSDRQIAFATKTDEDTVRAYRKLIGVTPVYKLVDTCAAEFEAFTPY 541

Query: 628  MYSSYD-FECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSN 686
             YS+YD  E E  P+ K+K +ILGGGPNRIGQGIEFDYCCCH +FSL  AGYETIM+NSN
Sbjct: 542  YYSTYDGTESEVTPSDKRKAMILGGGPNRIGQGIEFDYCCCHAAFSLSDAGYETIMVNSN 601

Query: 687  PETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHR 746
            PETVSTDYDTSDRLYFEPLT EDVLN+I+ E PEG+IVQFGGQTPLKL++P+  YL    
Sbjct: 602  PETVSTDYDTSDRLYFEPLTKEDVLNIIEAENPEGVIVQFGGQTPLKLAVPLDNYLKADN 661

Query: 747  LPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEIG 806
             P  +     +IWGT PD ID AEDRERF  I+ EL I QP  GIA+  ++A AIA  + 
Sbjct: 662  CPVTT-----KIWGTQPDDIDTAEDRERFEKILHELQILQPANGIARDYSEAQAIANRVE 716

Query: 807  YPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALAD 866
            YPVVVRPSYVLGGRAMEIVY+D  L  Y++ AV+V+P+ P+L+DK+L +AIE+DVDAL D
Sbjct: 717  YPVVVRPSYVLGGRAMEIVYSDAELDYYMKYAVQVEPDHPILVDKFLENAIEVDVDALCD 776

Query: 867  SCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNC 926
              G VVIGGIMEHIE+AG+HSGDSAC IP  ++    +DTI  WT KLAK LNV GLMN 
Sbjct: 777  KTGKVVIGGIMEHIEEAGIHSGDSACSIPHTSLPDDVMDTIREWTTKLAKALNVVGLMNI 836

Query: 927  QYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPKH 986
            QYA+     VY+LEANPRASRTVP+VSKA G  LA+ A+LVMSGK+L +LG   EV  KH
Sbjct: 837  QYAV-KDNQVYILEANPRASRTVPYVSKATGRSLARIASLVMSGKTLEELGVDGEVTLKH 895

Query: 987  VSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVFL 1046
            V+VKEAVLPF KF+G D LLGPEMRSTGEVMGID  F  AFAKA+I AG KL   GTVF+
Sbjct: 896  VAVKEAVLPFNKFEGTDTLLGPEMRSTGEVMGIDTDFGKAFAKAEIGAGVKLATEGTVFV 955

Query: 1047 SLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIA-VERVLKMHEGRPHAGDMVA 1105
            S+ND  K     + K  +++GF+IV+T+GT   L   GI  VE VLK+HEGRPH  D + 
Sbjct: 956  SMNDRNKEAAVPVVKDLIELGFRIVATAGTRQVLLDNGIEDVELVLKLHEGRPHVVDWMK 1015

Query: 1106 NGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTVTMT 1165
            NG IQ ++ T SG+   Q DG  +RR  L YK+P+ITT++GA A   AIRSL++  + + 
Sbjct: 1016 NGWIQFIINTPSGED-SQTDGRVIRRTALDYKLPIITTLAGARATVAAIRSLQAEPLDVK 1074

Query: 1166 ALQDFF 1171
             LQ++ 
Sbjct: 1075 PLQEYL 1080


>gi|209528194|ref|ZP_03276664.1| carbamoyl-phosphate synthase, large subunit [Arthrospira maxima
            CS-328]
 gi|376005610|ref|ZP_09783069.1| Carbamoyl-phosphate synthase large chain [Arthrospira sp. PCC 8005]
 gi|209491379|gb|EDZ91764.1| carbamoyl-phosphate synthase, large subunit [Arthrospira maxima
            CS-328]
 gi|375326008|emb|CCE18822.1| Carbamoyl-phosphate synthase large chain [Arthrospira sp. PCC 8005]
          Length = 1077

 Score = 1506 bits (3900), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 731/1084 (67%), Positives = 884/1084 (81%), Gaps = 10/1084 (0%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            +R DL+KIL+LG+GPIVIGQACEFDYSGTQACKAL+EEGY+V+L+NSNPATIMTDP  A 
Sbjct: 3    RRDDLKKILLLGSGPIVIGQACEFDYSGTQACKALREEGYDVVLVNSNPATIMTDPETAR 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
            RTYI P+TPE+VE+V+E ERPDALLPTMGGQTALN+AVAL+++G L+KYGVELIGAKLDA
Sbjct: 63   RTYIEPLTPEIVEKVIEAERPDALLPTMGGQTALNIAVALSKNGVLDKYGVELIGAKLDA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I+KAEDR LFKQAM+ IGV   PSGI N L+E  +IA +IG +PLIIRPAFT+GGTGGGI
Sbjct: 123  IEKAEDRLLFKQAMEKIGVGCCPSGIANNLNEARAIAEQIGSYPLIIRPAFTMGGTGGGI 182

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EE+E +  AGL AS  SQ+LVE+SL+GWKEYELEVMRDLADNVVIICSIEN+DPMG
Sbjct: 183  AYNQEEYEELAIAGLDASPMSQILVEQSLIGWKEYELEVMRDLADNVVIICSIENLDPMG 242

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQRLRD +I IIREIGVE GGSN+QF+VNPV+G+V+VIEMN
Sbjct: 243  VHTGDSITVAPAQTLTDKEYQRLRDAAIKIIREIGVETGGSNIQFSVNPVNGDVIVIEMN 302

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRF 447
            PRVSRSSALASKATGFPIAK AAKLSVGY+LD+I NDITKKTPASFEP+IDYVVTKIPRF
Sbjct: 303  PRVSRSSALASKATGFPIAKFAAKLSVGYTLDEISNDITKKTPASFEPTIDYVVTKIPRF 362

Query: 448  AFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDWE 507
             FEKFPG+EP+LTTQMKSVGEAMA+G TF ESFQKA+RSLE G +GWG  N  E     +
Sbjct: 363  TFEKFPGAEPVLTTQMKSVGEAMAIGGTFCESFQKAMRSLETGLAGWGL-NTNEKVPSLD 421

Query: 508  QLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSVS 567
             ++  LR PNPDRM  +  AM  GM V+EI+EL+ ID WFL + ++L++ E+FL     +
Sbjct: 422  TIRSGLRTPNPDRMLTLRYAMLLGMSVEEIYELTGIDPWFLDKLQQLLETEKFLKRTPFN 481

Query: 568  NMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTPY 627
             +  +D   +KR+GFSD+QIAFA+++TE EVR+ R  LGV P+YK VDTCAAEFE+ TPY
Sbjct: 482  QINHEDMLAIKRQGFSDRQIAFASQTTEDEVRKYRKGLGVKPAYKMVDTCAAEFESTTPY 541

Query: 628  MYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSNP 687
             YS+Y  E E  P+ + KV+ILGGGPNRIGQGIEFDYCCCH S+SL+  GY TIM+NSNP
Sbjct: 542  YYSTYWEEDEMIPSDRPKVMILGGGPNRIGQGIEFDYCCCHASYSLRDDGYITIMVNSNP 601

Query: 688  ETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHRL 747
            ETVSTDYDTSDRLYFEPLT EDV N+I+ E P GI++QFGGQTPLKL++P+ + L E  L
Sbjct: 602  ETVSTDYDTSDRLYFEPLTKEDVFNIIEAEEPLGIVIQFGGQTPLKLAVPLEKALSESTL 661

Query: 748  PSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEIGY 807
             +       +IWGTSPDSID AEDRERF  I++EL+I+Q   G+A+S  +ALA+A  IGY
Sbjct: 662  KT-------KIWGTSPDSIDTAEDRERFEKILRELNIQQAANGMARSYEEALAVAGRIGY 714

Query: 808  PVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALADS 867
            PVVVRPSYVLGGRAMEIVY+DE L  Y+  AV V+P+ P+L+DK+L +A+E+DVDA+AD 
Sbjct: 715  PVVVRPSYVLGGRAMEIVYSDEELERYMTFAVLVEPDHPILVDKFLENAVEVDVDAIADH 774

Query: 868  CGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNCQ 927
             GNVVIGGIMEHIEQAG+HSGDSAC IPT+++S + L TI   TI+LAK LNV GLMN Q
Sbjct: 775  TGNVVIGGIMEHIEQAGIHSGDSACSIPTQSLSETVLATIRRQTIQLAKALNVVGLMNIQ 834

Query: 928  YAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPKHV 987
            +A+     VY+LEANPRASRTVPFVSKAIG PLAK A+ VMSGK+L +LG+T+E IP +V
Sbjct: 835  FAVQGE-QVYILEANPRASRTVPFVSKAIGIPLAKMASRVMSGKTLAELGYTQEKIPDYV 893

Query: 988  SVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVFLS 1047
            SVKEAVLPF KF G DVLLGPEMRSTGEVMGID  F  AFAKA++AAGQ +P+SGTVF+S
Sbjct: 894  SVKEAVLPFAKFPGTDVLLGPEMRSTGEVMGIDTEFGRAFAKAELAAGQVIPMSGTVFVS 953

Query: 1048 LNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVANG 1107
            +ND  K  +  + + FLD+GFK+ +T  T   L   G+ V+  LK+HEGRP+  D + N 
Sbjct: 954  VNDRDKEAIVPVVQDFLDLGFKVTATINTRKVLWEHGVKVDLELKLHEGRPNVLDAIKNH 1013

Query: 1108 QIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTVTMTAL 1167
             +Q+ +IT SG S  + DG+ +RR  LAYKVP+ITT++GA A   A+RSL+   + + AL
Sbjct: 1014 AVQLAIITPSG-SEARADGIMIRRSALAYKVPIITTIAGAKATISALRSLQQRPLDVKAL 1072

Query: 1168 QDFF 1171
            QD++
Sbjct: 1073 QDYY 1076


>gi|300868973|ref|ZP_07113577.1| carbamoyl phosphate synthase large subunit [Oscillatoria sp. PCC
            6506]
 gi|300333040|emb|CBN58769.1| carbamoyl phosphate synthase large subunit [Oscillatoria sp. PCC
            6506]
          Length = 1101

 Score = 1505 bits (3897), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 741/1106 (66%), Positives = 891/1106 (80%), Gaps = 32/1106 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            +R DL+KIL++G+GPIVIGQACEFDYSGTQACKAL+EEG++V+L+NSNPATIMTDP  A+
Sbjct: 3    RRQDLKKILLIGSGPIVIGQACEFDYSGTQACKALREEGFQVVLVNSNPATIMTDPETAE 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
            RTYI P+TPE++E+++ KERP A+LPTMGGQTALNLAVA+A++G LEKYGVELIGAKL A
Sbjct: 63   RTYIEPLTPEILEKIIAKERPQAILPTMGGQTALNLAVAVAKNGVLEKYGVELIGAKLPA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I+ AEDR LFK+AM  IGV   PSGI   LDE  +I +EIG FPLIIRPAFT+GGTGGGI
Sbjct: 123  IEMAEDRLLFKEAMARIGVPVCPSGIACNLDEARAIGHEIGSFPLIIRPAFTMGGTGGGI 182

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            +YN+EEFE + + G+ AS  SQ+L+E+SL+GWKEYELEVMRDLADNVVIICSIEN+DPMG
Sbjct: 183  SYNQEEFEEMAQGGIDASPVSQILIEQSLIGWKEYELEVMRDLADNVVIICSIENLDPMG 242

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            +HTGDSITVAPAQTLTDKEYQRLRD SI IIREIGVE GGSN+QFAVNPV+GE +VIEMN
Sbjct: 243  IHTGDSITVAPAQTLTDKEYQRLRDASIKIIREIGVETGGSNIQFAVNPVNGEFIVIEMN 302

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRF 447
            PRVSRSSALASKATGFPIAKMAAKL+VGYSLD+IPNDITKKTPASFEP+IDYVVTKIPRF
Sbjct: 303  PRVSRSSALASKATGFPIAKMAAKLAVGYSLDEIPNDITKKTPASFEPTIDYVVTKIPRF 362

Query: 448  AFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDWE 507
            AFEKFPGSEP LTTQMKSVGE MA+GRTF ESFQKALR LE G +GWGC   ++L    E
Sbjct: 363  AFEKFPGSEPTLTTQMKSVGEVMAIGRTFCESFQKALRGLETGRAGWGCDKQEKLP-SLE 421

Query: 508  QLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSVS 567
            Q++  LR PNP+R+  +  AM  GM V+EI+EL+ ID WFL +F +L++ E+FL    + 
Sbjct: 422  QIRAGLRTPNPERIFTVRHAMMMGMTVEEIYELTGIDHWFLDKFVQLLETEKFLKRTPLQ 481

Query: 568  NMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTPY 627
             +TKD  +E+K+ GFSD+QIA+A K+TE EVR  R  LGVIP YK VDTCAAEFEA TPY
Sbjct: 482  QLTKDLMFEIKQLGFSDRQIAYAQKTTEDEVRTYRKKLGVIPIYKTVDTCAAEFEAFTPY 541

Query: 628  MYSSYDF-----------------------ECESAPTQKKKVLILGGGPNRIGQGIEFDY 664
             YS+Y+                        E E  P++K+KV+ILGGGPNRIGQGIEFDY
Sbjct: 542  YYSTYELGAAIWELGDEQKQISAAAQSLTPESEVLPSEKRKVMILGGGPNRIGQGIEFDY 601

Query: 665  CCCHTSFSLQSAGYETIMMNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIV 724
            CCCH SFSL   G+ETIM+NSNPETVSTDYDTSDRLYFEPLT EDVLN+I+ E PEG+I+
Sbjct: 602  CCCHASFSLGDDGFETIMVNSNPETVSTDYDTSDRLYFEPLTKEDVLNIIEAEDPEGVII 661

Query: 725  QFGGQTPLKLSLPIHQYLDEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSI 784
            QFGGQTPLKL++P+ + L  H  PS       +IWGTSPDSID AEDRERF  I++EL+I
Sbjct: 662  QFGGQTPLKLAVPLQKALTNH--PSVK----TKIWGTSPDSIDTAEDRERFEKILRELNI 715

Query: 785  EQPKGGIAKSEADALAIAKEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPE 844
            +Q   G+A+S  DAL +A+ IGYPVVVRPSYVLGGRAMEIVY+D  L  Y+  AV V+P+
Sbjct: 716  QQAANGMARSFEDALIVAQRIGYPVVVRPSYVLGGRAMEIVYSDVELERYMMFAVHVEPD 775

Query: 845  RPVLIDKYLSDAIEIDVDALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCL 904
             P+LIDK+L +AIE+DVDA+AD+ GNVVIGGIMEHIE+AG+HSGDSAC IPT+T+S + L
Sbjct: 776  HPILIDKFLENAIEVDVDAIADTSGNVVIGGIMEHIEEAGIHSGDSACSIPTQTLSLAAL 835

Query: 905  DTISSWTIKLAKRLNVCGLMNCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYA 964
             TI  WT++LAK L V GLMN Q+A+     VY++EANPRASRTVPFVSKAIG PLAK A
Sbjct: 836  ATIRGWTVELAKALKVIGLMNIQFAVQGE-QVYIIEANPRASRTVPFVSKAIGVPLAKIA 894

Query: 965  ALVMSGKSLNDLGFTKEVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFP 1024
            + VMSGK+L DLGFTKE+IP HV+VKEAVLPF KF G D LLGPEMRSTGEVMGID  F 
Sbjct: 895  SRVMSGKTLVDLGFTKEIIPVHVAVKEAVLPFAKFPGTDTLLGPEMRSTGEVMGIDTDFG 954

Query: 1025 IAFAKAQIAAGQKLPLSGTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKG 1084
             AFAKAQ+ AGQ LPLSGTVF+S+ D  K  +  + K FL++GF +V+T GT   L  +G
Sbjct: 955  KAFAKAQLGAGQVLPLSGTVFVSMRDRDKIAVVPVVKEFLELGFNVVATEGTRKVLREQG 1014

Query: 1085 IAVERVLKMHEGRPHAGDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTV 1144
            + V   LK+HEGRP+  D + N +IQ+++ T SG+   + DG+ +RR  LAYK+P+ITT+
Sbjct: 1015 VKVGLELKLHEGRPNLLDSIKNEKIQLIITTPSGEE-SRADGIFIRRTALAYKIPIITTI 1073

Query: 1145 SGALANAEAIRSLKSNTVTMTALQDF 1170
            +GA A A AIRSLKS+++ + A+QD+
Sbjct: 1074 AGAKATAAAIRSLKSHSLDVKAIQDY 1099



 Score =  228 bits (580), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 139/419 (33%), Positives = 230/419 (54%), Gaps = 19/419 (4%)

Query: 69  DSSAELSNGAASSKDQKLGKRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYE 128
           D   ++S  A S   +     ++ RK++ILG GP  IGQ  EFDY    A  +L ++G+E
Sbjct: 557 DEQKQISAAAQSLTPESEVLPSEKRKVMILGGGPNRIGQGIEFDYCCCHASFSLGDDGFE 616

Query: 129 VILINSNPATIMTDPGLADRTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALA 188
            I++NSNP T+ TD   +DR Y  P+T E V  ++E E P+ ++   GGQT L LAV L 
Sbjct: 617 TIMVNSNPETVSTDYDTSDRLYFEPLTKEDVLNIIEAEDPEGVIIQFGGQTPLKLAVPLQ 676

Query: 189 ESGALEKY---GVELIGAKLDAIKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIAN 245
           +  AL  +     ++ G   D+I  AEDR+ F++ ++ + ++   +G+  + ++ + +A 
Sbjct: 677 K--ALTNHPSVKTKIWGTSPDSIDTAEDRERFEKILRELNIQQAANGMARSFEDALIVAQ 734

Query: 246 EIGEFPLIIRPAFTLGGTGGGIAYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELE 305
            IG +P+++RP++ LGG    I Y+  E E      +       +L++K L    E +++
Sbjct: 735 RIG-YPVVVRPSYVLGGRAMEIVYSDVELERYMMFAVHVEPDHPILIDKFLENAIEVDVD 793

Query: 306 VMRDLADNVVIICSIENVDPMGVHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVEC 365
            + D + NVVI   +E+++  G+H+GDS    P QTL+      +R +++ + + + V  
Sbjct: 794 AIADTSGNVVIGGIMEHIEEAGIHSGDSACSIPTQTLSLAALATIRGWTVELAKALKV-I 852

Query: 366 GGSNVQFAVNPVDGEVMVIEMNPRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDI 425
           G  N+QFAV     +V +IE NPR SR+    SKA G P+AK+A+++  G +L  +    
Sbjct: 853 GLMNIQFAVQ--GEQVYIIEANPRASRTVPFVSKAIGVPLAKIASRVMSGKTLVDL--GF 908

Query: 426 TKK-TPASFEPSIDYVVTKIPRFAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKA 483
           TK+  P        +V  K     F KFPG++ LL  +M+S GE M +   F ++F KA
Sbjct: 909 TKEIIPV-------HVAVKEAVLPFAKFPGTDTLLGPEMRSTGEVMGIDTDFGKAFAKA 960


>gi|427733999|ref|YP_007053543.1| carbamoyl-phosphate synthase large subunit [Rivularia sp. PCC 7116]
 gi|427369040|gb|AFY52996.1| carbamoyl-phosphate synthase large subunit [Rivularia sp. PCC 7116]
          Length = 1085

 Score = 1504 bits (3895), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 732/1089 (67%), Positives = 888/1089 (81%), Gaps = 12/1089 (1%)

Query: 86   LGKRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGL 145
            + +R DL+KIL+LG+GPI+IGQACEFDYSGTQACK+L+EEGYEV+L+NSNPATIMTDP  
Sbjct: 1    MPRRQDLQKILLLGSGPIIIGQACEFDYSGTQACKSLQEEGYEVVLVNSNPATIMTDPET 60

Query: 146  ADRTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKL 205
            ADRTYI P+TPELVE+V+EKERPDALLPTMGGQTALN+AVALA++G L+KY VELIGAKL
Sbjct: 61   ADRTYIEPLTPELVEKVIEKERPDALLPTMGGQTALNIAVALAKNGVLDKYSVELIGAKL 120

Query: 206  DAIKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGG 265
             AI+KAEDR LF  AM  I V   PSG  ++L+E   IA  IG +PLIIRP FT+GGTGG
Sbjct: 121  AAIEKAEDRQLFSDAMARIDVAICPSGTASSLEEARVIARNIGSYPLIIRPGFTMGGTGG 180

Query: 266  GIAYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDP 325
            GIAYN+EEFE + +AG+ AS  SQ+L+++SLLGWKEYELEVMRDLADNVVIICSIEN+DP
Sbjct: 181  GIAYNQEEFEQMAQAGIDASPVSQILIDQSLLGWKEYELEVMRDLADNVVIICSIENIDP 240

Query: 326  MGVHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIE 385
            MG+HTGDSITVAPAQTLTDKEYQRLRD +I IIREIGVE GGSN+QFAVNP+ GEV+VIE
Sbjct: 241  MGIHTGDSITVAPAQTLTDKEYQRLRDIAIKIIREIGVETGGSNIQFAVNPMTGEVVVIE 300

Query: 386  MNPRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIP 445
            MNPRVSRSSALASKATGFPIAK+AAKL+VGYSL++I NDITK+TPASFEP+IDYVVTK+P
Sbjct: 301  MNPRVSRSSALASKATGFPIAKIAAKLAVGYSLNEIKNDITKETPASFEPTIDYVVTKVP 360

Query: 446  RFAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWD 505
            RFAFEKFPGS  +LTTQMKSVGEAMA+GRTF ESFQKALRSLE G +GWGC   ++L   
Sbjct: 361  RFAFEKFPGSSSVLTTQMKSVGEAMAIGRTFNESFQKALRSLETGRAGWGCDRHEKLP-S 419

Query: 506  WEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQS 565
             EQ++  LR PNP+R+ A+  AM+  + ++EI+EL+ ID WFL + ++L+DVE+F+   S
Sbjct: 420  GEQIRAQLRTPNPERIFAVRHAMQLKISIEEIYELTGIDPWFLDKMQQLLDVEKFIKRNS 479

Query: 566  VSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANT 625
            +  +TK+  +E+K+ GFSDKQIAFATK+TE EVREKR  LG+IP YK VDTCAAEFEA T
Sbjct: 480  LQQLTKEQLHEIKQYGFSDKQIAFATKTTEDEVREKRKQLGIIPVYKTVDTCAAEFEAFT 539

Query: 626  PYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNS 685
            PY YSSY+ E E   + K KV+ILGGGPNRIGQGIEFDYCCCH +++L+ AGYETIM+NS
Sbjct: 540  PYHYSSYEEESEVIASDKPKVMILGGGPNRIGQGIEFDYCCCHAAYALKDAGYETIMVNS 599

Query: 686  NPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEH 745
            NPETVSTDYDTSDRLYFEPLT EDVLN+I+ E P GIIVQFGGQTPLKL+LP+ +YL   
Sbjct: 600  NPETVSTDYDTSDRLYFEPLTKEDVLNIIEAENPVGIIVQFGGQTPLKLALPLQEYL--- 656

Query: 746  RLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEI 805
                AS     +IWGTSPDSID AEDRERF  I++EL I QP  GIA++  DAL +AK I
Sbjct: 657  ---QASNSPQTQIWGTSPDSIDTAEDRERFEKILQELDITQPPNGIARTYEDALIVAKRI 713

Query: 806  GYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALA 865
            GYPVVVRPSYVLGGRAMEIVY+D  L  Y+  AV+V+PE P+LIDK+L +A E+DVDA+A
Sbjct: 714  GYPVVVRPSYVLGGRAMEIVYSDAELERYMTFAVQVEPEHPILIDKFLENATEVDVDAIA 773

Query: 866  DSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMN 925
            DS G VVIGGIMEHIEQAG+HSGDSAC +P  ++  + L+ I + TIKLA+ L V GLMN
Sbjct: 774  DSTGKVVIGGIMEHIEQAGIHSGDSACALPAISLPQAILEQIRTSTIKLAQALKVVGLMN 833

Query: 926  CQYAI----TTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKE 981
             Q+AI    + S  VY+LEANPRASRTVPFVSKA G P+AK A+L+MSGK+L +LGFTKE
Sbjct: 834  VQFAIAGVQSYSPQVYILEANPRASRTVPFVSKATGVPIAKLASLIMSGKTLEELGFTKE 893

Query: 982  VIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLS 1041
            VIP H++VKEAVLPF KF G D +LGPEMRSTGEVMGID  F  A+AKA++AAG+ LPLS
Sbjct: 894  VIPSHIAVKEAVLPFNKFPGTDTILGPEMRSTGEVMGIDSDFGKAYAKAEMAAGEHLPLS 953

Query: 1042 GTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAG 1101
            GTVF+S+ND  K     + K F+ +GF +++TSGT   L+  G+ ++ +LK+HEGRPH  
Sbjct: 954  GTVFVSMNDRDKAAAIAVVKEFIQLGFSVMATSGTRRVLQENGLNIDPILKLHEGRPHVV 1013

Query: 1102 DMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNT 1161
            D + N QIQ+++ T SG    Q DG  +RR  L+YK+P++TT++GA A   AIRSL++  
Sbjct: 1014 DAIKNRQIQLIINTPSGQEA-QSDGRLIRRMALSYKIPILTTIAGAKATLAAIRSLQNTN 1072

Query: 1162 VTMTALQDF 1170
            + +  +QD+
Sbjct: 1073 LDVKLIQDY 1081


>gi|428308019|ref|YP_007144844.1| carbamoyl-phosphate synthase large subunit [Crinalium epipsammum PCC
            9333]
 gi|428249554|gb|AFZ15334.1| carbamoyl-phosphate synthase, large subunit [Crinalium epipsammum PCC
            9333]
          Length = 1091

 Score = 1504 bits (3893), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 734/1084 (67%), Positives = 892/1084 (82%), Gaps = 5/1084 (0%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            +R DL KIL+LG+GPIVIGQ CEFDYSGTQACKAL+EEGYEV+L+NSNPATIMTDP  AD
Sbjct: 3    RRNDLHKILLLGSGPIVIGQGCEFDYSGTQACKALREEGYEVVLVNSNPATIMTDPETAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
            RTYI P+TPELVE+V+ KERPDALLPTMGGQTALNLAV+LA++G LEKYGVELIGAKL A
Sbjct: 63   RTYIEPLTPELVEKVIAKERPDALLPTMGGQTALNLAVSLAKNGVLEKYGVELIGAKLPA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I+KAEDR LFKQAM+ IGV   PSGI + LDE  +IA++IG +PLIIRPAFTLGG GGGI
Sbjct: 123  IEKAEDRLLFKQAMERIGVDVCPSGIAHNLDEAKAIAHQIGSYPLIIRPAFTLGGAGGGI 182

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EE+E + + G+ AS  SQ+LVE+SLLGWKEYELEVMRDLADNVVIICSIEN+DPMG
Sbjct: 183  AYNQEEYEEMAQGGIDASPVSQILVEQSLLGWKEYELEVMRDLADNVVIICSIENIDPMG 242

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            +HTGDSITVAPAQTLTDKEYQRLRD SI IIREIGVE GGSN+QFAVNP +G+ +VIEMN
Sbjct: 243  IHTGDSITVAPAQTLTDKEYQRLRDASIKIIREIGVETGGSNIQFAVNPTNGDFIVIEMN 302

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRF 447
            PRVSRSSALASKATGFPIAK AAKL+VGY+LD+IPNDITKKTPASFEP+IDYVVTKIPRF
Sbjct: 303  PRVSRSSALASKATGFPIAKFAAKLAVGYTLDEIPNDITKKTPASFEPTIDYVVTKIPRF 362

Query: 448  AFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDWE 507
            AFEKFPGS+  LTTQMKSVGEAMA+GRTFQESFQKALRSLE G +GWGC  V++L     
Sbjct: 363  AFEKFPGSQATLTTQMKSVGEAMAIGRTFQESFQKALRSLETGRAGWGCDGVEKLP-SLP 421

Query: 508  QLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSVS 567
            Q++  LR PNP+R+  +  A+K GM V+EI+EL+ ID WFL + +EL+  E  L    ++
Sbjct: 422  QVQAGLRTPNPERIFTVRHALKLGMTVEEIYELTNIDPWFLEKMEELLVTENLLKRTPLT 481

Query: 568  NMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTPY 627
             +TK+  +++KR+GFSD+QIA+ATK+ E +VR+ R  LGV+P+YK VDTCAAEFEA TPY
Sbjct: 482  ELTKEQLWDIKRQGFSDRQIAYATKTKEDQVRQYRKQLGVVPAYKLVDTCAAEFEAQTPY 541

Query: 628  MYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSNP 687
             YS+Y+ E E  P+ ++KV+ILGGGPNRIGQGIEFDYCCCH S++L+  G+ETIM+NSNP
Sbjct: 542  YYSTYEEESEIIPSDRRKVMILGGGPNRIGQGIEFDYCCCHASYALRKDGFETIMVNSNP 601

Query: 688  ETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHRL 747
            ETVSTDYDTSDRLYFEPLT EDVLN+I+ E+PEG+IVQFGGQTPLKL+LP+ +YL++  +
Sbjct: 602  ETVSTDYDTSDRLYFEPLTREDVLNIIEAEQPEGVIVQFGGQTPLKLALPLQEYLNQ--I 659

Query: 748  PSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEIGY 807
             ++    L +IWGTSP+SID AE+RERF  I++EL I+QP  G+A+S  DAL +A+ IGY
Sbjct: 660  NASDSPLLTKIWGTSPESIDIAENRERFEQILRELDIKQPANGMARSYDDALQVARRIGY 719

Query: 808  PVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALADS 867
            PVVVRPSYVLGGRAMEIVY+D  L  Y+  AV+V+P+ P+LIDK+L +AIE+DVDA+AD 
Sbjct: 720  PVVVRPSYVLGGRAMEIVYSDLELERYMMYAVQVEPDHPILIDKFLENAIEVDVDAIADH 779

Query: 868  CGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNCQ 927
             G V+IGGIMEHIEQAG+HSGDSAC +P  ++SS  LDTI +WT++LAK L V GLMN Q
Sbjct: 780  TGKVIIGGIMEHIEQAGIHSGDSACSLPCVSLSSDILDTIRTWTVQLAKALKVIGLMNIQ 839

Query: 928  YAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPKHV 987
            +A+     VY++EANPRASRT+PFV+KA G PLA  A+ +MSGK+L +LG T+E IPKH+
Sbjct: 840  FAVQGE-QVYIIEANPRASRTIPFVAKATGIPLAGLASRIMSGKTLKELGITEEFIPKHI 898

Query: 988  SVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVFLS 1047
            +VKE VLPFEKF G D +LGPEMRSTGEVMGID+ F  AFAKA +AAGQ+LPLSGTVF+S
Sbjct: 899  AVKEVVLPFEKFPGTDTILGPEMRSTGEVMGIDVDFGRAFAKAALAAGQRLPLSGTVFVS 958

Query: 1048 LNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVANG 1107
             ND  K  +  + K  +++GF IVST GT   L+  GI VE VLK+HEGRPH  D + N 
Sbjct: 959  TNDRDKASVVPVVKDLIELGFHIVSTEGTRRVLKEHGIDVELVLKLHEGRPHVLDFIKNE 1018

Query: 1108 QIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTVTMTAL 1167
            QIQ+++ T SG+   Q DG  +RR  L YK+P+ITT++ A A A AIR L+   + + AL
Sbjct: 1019 QIQLIINTPSGEEA-QADGRLIRRSALTYKIPLITTIASAKATAAAIRCLQLQPMEVKAL 1077

Query: 1168 QDFF 1171
            QD+ 
Sbjct: 1078 QDYI 1081


>gi|22299875|ref|NP_683122.1| carbamoyl phosphate synthase large subunit [Thermosynechococcus
            elongatus BP-1]
 gi|22296060|dbj|BAC09884.1| carbamoyl-phosphate synthase pyrimidine-specific large chain
            [Thermosynechococcus elongatus BP-1]
          Length = 1100

 Score = 1502 bits (3889), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 740/1107 (66%), Positives = 898/1107 (81%), Gaps = 30/1107 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            +RTD+ +ILI+G+GPIVIGQACEFDYSGTQACKAL+EEGYEVILINSNPATIMTDP +AD
Sbjct: 3    RRTDISRILIIGSGPIVIGQACEFDYSGTQACKALREEGYEVILINSNPATIMTDPEIAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
            RTYI P+TPE+VE+V+  ERPDALLPTMGGQTALNLAVALA+SG L++YGVELIGAKL A
Sbjct: 63   RTYIEPLTPEMVEKVIAAERPDALLPTMGGQTALNLAVALAKSGVLDRYGVELIGAKLPA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I+ AEDR LFK+AM+ IGV   PSG+ NTL+E  +IA EIG +PLIIRPAFTLGGTGGGI
Sbjct: 123  IEMAEDRKLFKEAMQRIGVAVCPSGLANTLEEARAIAQEIGVYPLIIRPAFTLGGTGGGI 182

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEFEAI  AGL AS  SQ+L+E+SL+GWKEYELEVMRD+ADNVVIICSIEN+DPMG
Sbjct: 183  AYNQEEFEAIATAGLEASPVSQILIEQSLIGWKEYELEVMRDMADNVVIICSIENIDPMG 242

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            +HTGDSITVAPAQTLTDKEYQRLRD +I IIREIGVE GGSN+QFAVNP  GEV+VIEMN
Sbjct: 243  IHTGDSITVAPAQTLTDKEYQRLRDAAIKIIREIGVETGGSNIQFAVNPETGEVIVIEMN 302

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRF 447
            PRVSRSSALASKATGFPIAK+AAKL+VGY+L +IPNDIT+KTPASFEP+IDYVVTKIPRF
Sbjct: 303  PRVSRSSALASKATGFPIAKIAAKLAVGYTLPEIPNDITQKTPASFEPTIDYVVTKIPRF 362

Query: 448  AFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDWE 507
            AFEKFPGS P+LTTQMKSVGEAMA+GRTFQES QKALRSLE G +GWGC   ++L    E
Sbjct: 363  AFEKFPGSPPVLTTQMKSVGEAMAIGRTFQESLQKALRSLETGRAGWGCDRPEKLP-SLE 421

Query: 508  QLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSVS 567
            QL+  LR PNP+R+ AI  A   GM V+EI+EL+ ID WFL Q + L++ E+FL    + 
Sbjct: 422  QLRGKLRTPNPERIFAIRHAFLLGMTVEEIYELTAIDPWFLRQMQGLLETEKFLKRSKLE 481

Query: 568  NMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTPY 627
             +T DD + +K++GFSD QIA+ATK+T+ +VR  R SLGV+P YK VDTCAAEFEA TPY
Sbjct: 482  QLTADDLWRIKQQGFSDAQIAYATKTTDDQVRAYRQSLGVVPVYKTVDTCAAEFEAYTPY 541

Query: 628  MYSSYDF-----------------ECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTS 670
             YS+Y+                  E E  P +K +V+ILG GPNRIGQGIEFDYCCCH +
Sbjct: 542  YYSTYERPLEQINPDSGDVELLPPESEVLPPRKPRVMILGSGPNRIGQGIEFDYCCCHAA 601

Query: 671  FSLQSAGYETIMMNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQT 730
            ++L++  YETIM+NSNPETVSTDYDTSDRLYFEPLT EDVLN+I++ERP GII+QFGGQT
Sbjct: 602  YALRADDYETIMVNSNPETVSTDYDTSDRLYFEPLTKEDVLNIIEVERPVGIIIQFGGQT 661

Query: 731  PLKLSLPIHQYLDEHRLPSASGDGL-VRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKG 789
            PLKL+LP+ +YL +       GD L  +IWGTSPDSID AEDRERF  I++EL+I QP  
Sbjct: 662  PLKLALPLQRYLQQQ------GDRLGTQIWGTSPDSIDIAEDRERFEKILRELNIPQPPN 715

Query: 790  GIAKSEADALAIAKEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLI 849
            G A+S A+AL+IA+ IGYPVVVRPSYVLGGRAMEIVY++  L  Y+  AV+V+P RP+LI
Sbjct: 716  GTARSYAEALSIAERIGYPVVVRPSYVLGGRAMEIVYSNGELERYMNAAVQVEPGRPILI 775

Query: 850  DKYLSDAIEIDVDALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISS 909
            DKYL +AIE+DVDA+AD+ G VVIGGIMEHIEQAG+HSGDSAC +PT+++S + L TI +
Sbjct: 776  DKYLENAIEVDVDAIADATGTVVIGGIMEHIEQAGIHSGDSACSLPTQSLSPAVLQTIRT 835

Query: 910  WTIKLAKRLNVCGLMNCQYAITTSGD-VYLLEANPRASRTVPFVSKAIGHPLAKYAALVM 968
            W+I LA+ L V GLMN Q A+   GD VY+LEANPRASRTVPFVSKAIG PLAK AA +M
Sbjct: 836  WSIALAQALKVVGLMNLQLAV--QGDQVYILEANPRASRTVPFVSKAIGIPLAKVAARLM 893

Query: 969  SGKSLNDLGFTKEVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFA 1028
            SGK+L +L F  E IP HV+VKEAVLPFEKF G D +LGPEMRSTGE MGIDM+F  A+A
Sbjct: 894  SGKTLAELNFLNEKIPNHVAVKEAVLPFEKFAGTDTVLGPEMRSTGEAMGIDMTFGAAYA 953

Query: 1029 KAQIAAGQKLPLSGTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIA-V 1087
            K+Q+AA Q+LPL GTVF+S++D  K  +  + +    +GF++++T GT + L   G++ +
Sbjct: 954  KSQLAANQRLPLKGTVFVSMSDRDKAAIVPVVQELQSLGFRMIATEGTRNALLEAGLSNI 1013

Query: 1088 ERVLKMHEGRPHAGDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGA 1147
            E +LK+HEGRPH  D + NGQI +++ T SG    + D   +RR  LAYK+P++TT++GA
Sbjct: 1014 ELILKLHEGRPHVLDAIKNGQIHLILNTPSGQEA-RTDAQLIRRTALAYKIPIVTTIAGA 1072

Query: 1148 LANAEAIRSLKSNTVTMTALQDFFDVE 1174
             A A AI++L+++T+ + ALQD+  VE
Sbjct: 1073 KATAAAIKTLQTSTLGVRALQDYHRVE 1099


>gi|427417099|ref|ZP_18907282.1| carbamoyl-phosphate synthase large subunit [Leptolyngbya sp. PCC
            7375]
 gi|425759812|gb|EKV00665.1| carbamoyl-phosphate synthase large subunit [Leptolyngbya sp. PCC
            7375]
          Length = 1083

 Score = 1502 bits (3888), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 725/1085 (66%), Positives = 875/1085 (80%), Gaps = 6/1085 (0%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            +R DL KIL++G+GPIVIGQACEFDYSGTQACKAL+EEGYEV+LINSNPATIMTDP  AD
Sbjct: 3    RRNDLSKILLIGSGPIVIGQACEFDYSGTQACKALREEGYEVVLINSNPATIMTDPETAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
            RTYI P+TPELV +V+E+E+PDALLPTMGGQTALNLAV+LA+ G L  + VELIGAKLDA
Sbjct: 63   RTYIEPLTPELVARVIEQEKPDALLPTMGGQTALNLAVSLAKEGVLAAHNVELIGAKLDA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I+ AEDR LFK+AM+ IGV   PSG+  T+DE  +IA EIG +PLIIRPAFTLGGTGGGI
Sbjct: 123  IEMAEDRRLFKEAMERIGVGICPSGLAETMDEAQAIAQEIGTYPLIIRPAFTLGGTGGGI 182

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            +YN+EEFE I K+GL AS  SQ+L+EKSLLGWKEYELEVMRDLADNVVIICSIEN+DPMG
Sbjct: 183  SYNQEEFETIAKSGLDASPVSQILIEKSLLGWKEYELEVMRDLADNVVIICSIENLDPMG 242

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            +HTGDSITVAPAQTLTDKEYQRLRD SI IIREIGVE GGSN+QFAVNP  G V+VIEMN
Sbjct: 243  IHTGDSITVAPAQTLTDKEYQRLRDASIKIIREIGVETGGSNIQFAVNPDTGAVIVIEMN 302

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRF 447
            PRVSRSSALASKATGFPIAK AAKL+VGY+L++I NDITKKTPASFEP+IDYVVTKIPRF
Sbjct: 303  PRVSRSSALASKATGFPIAKFAAKLAVGYTLNEISNDITKKTPASFEPTIDYVVTKIPRF 362

Query: 448  AFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDWE 507
            AFEKFPGS PLLTTQMKSVGEAMA+GRTFQESFQKALRSLE G +GWGC   + L     
Sbjct: 363  AFEKFPGSAPLLTTQMKSVGEAMAIGRTFQESFQKALRSLETGRAGWGCDRNENLP-TIS 421

Query: 508  QLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSVS 567
            +++ SLR PNPDR+ A+  A++ G+   +I+EL+ ID WF+ + ++L+  E++L   ++ 
Sbjct: 422  KVRSSLRSPNPDRIFALRHALQLGLSAQDIYELTGIDPWFIDKLQDLLITEKWLKRTALE 481

Query: 568  NMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTPY 627
             +T +    VK++GFSD+QIA+ATK+ E +VR  R SLGV P YK VDTCAAEFEA TPY
Sbjct: 482  AITAEQMMAVKQQGFSDRQIAYATKTDEDQVRANRKSLGVTPVYKTVDTCAAEFEAYTPY 541

Query: 628  MYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSNP 687
             YS+Y+ E E  P+ ++KV+ILGGGPNRIGQGIEFDYCCCH S++LQ+  +ETIM+NSNP
Sbjct: 542  YYSTYEAENEVKPSDRRKVMILGGGPNRIGQGIEFDYCCCHASYALQAHDFETIMVNSNP 601

Query: 688  ETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHRL 747
            ETVSTDYDTSDRLYFEPLT EDVLN+I+ E PEGII+QFGGQTPLKL++P+  YL     
Sbjct: 602  ETVSTDYDTSDRLYFEPLTKEDVLNIIEAENPEGIIIQFGGQTPLKLAVPLQAYLGSA-- 659

Query: 748  PSASGDGL-VRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEIG 806
            P   G  +  +IWGTSPDSID AEDRERF  I+ +L I QP  GIA+S  +AL IA++I 
Sbjct: 660  PEVDGQPIQTKIWGTSPDSIDTAEDRERFEKILWDLEITQPPNGIARSYQEALEIAQKIN 719

Query: 807  YPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALAD 866
            YPVVVRPSYVLGGRAME+VY+D+ L  Y+  AV+V+P+ P+LID++L +AIE+DVDA+ D
Sbjct: 720  YPVVVRPSYVLGGRAMEVVYSDQDLERYMTTAVQVEPDHPILIDRFLENAIEVDVDAICD 779

Query: 867  SCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNC 926
              G VVIGGIMEHIEQAG+HSGDSAC +PT T+S   L  I  WT+KLAK L V GLMN 
Sbjct: 780  RTGQVVIGGIMEHIEQAGIHSGDSACSLPTITLSDKALGIIRDWTVKLAKALKVIGLMNI 839

Query: 927  QYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPKH 986
            Q+A+    DVY+LEANPRASRTVPFVSKA G PLAK A L+MSG++L ++G T EVIP H
Sbjct: 840  QFAV-KDDDVYILEANPRASRTVPFVSKATGVPLAKTAVLIMSGRTLTEVGVTTEVIPNH 898

Query: 987  VSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVFL 1046
            +SVKEAVLPF KF G D LLGPEMRSTGEVMGID+ F  +FAKA++AA Q LPL GT F+
Sbjct: 899  ISVKEAVLPFSKFPGTDTLLGPEMRSTGEVMGIDVDFGRSFAKAELAASQALPLQGTTFI 958

Query: 1047 SLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVAN 1106
            S+ND  K  +  IAK   ++GF++++T+GT   L+  G+ V  V K+HEGRPH  D + N
Sbjct: 959  SMNDREKEAVVPIAKELAELGFQLMATTGTRRVLQSHGLDVRLVYKVHEGRPHVIDAIKN 1018

Query: 1107 GQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTVTMTA 1166
             +IQ+++ T +G +  + D + +RR  L YK+P ITT+SGA A  EAIRSL+  T+ + A
Sbjct: 1019 QEIQLIINTPTGATAQEDDRM-IRRTALDYKIPTITTLSGARATIEAIRSLQQQTLAVKA 1077

Query: 1167 LQDFF 1171
            LQD+ 
Sbjct: 1078 LQDYL 1082


>gi|414077762|ref|YP_006997080.1| carbamoyl-phosphate synthase large subunit [Anabaena sp. 90]
 gi|413971178|gb|AFW95267.1| carbamoyl-phosphate synthase, large subunit [Anabaena sp. 90]
          Length = 1084

 Score = 1502 bits (3888), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 727/1087 (66%), Positives = 887/1087 (81%), Gaps = 13/1087 (1%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            +R DL+KIL+LG+GPIVIGQACEFDYSGTQACKAL+EEGYEV+L+NSNPATIMTDP  AD
Sbjct: 3    RRQDLKKILLLGSGPIVIGQACEFDYSGTQACKALREEGYEVVLVNSNPATIMTDPETAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
            RTYI P+TPE+VE+V+ KERPDALLPTMGGQTALNLAVALA++G L+KY VELIGAKL A
Sbjct: 63   RTYIEPLTPEIVEKVIAKERPDALLPTMGGQTALNLAVALAKNGVLDKYNVELIGAKLPA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I+KAEDR LF +AM  IGV   PSG  +TLDE  +IA +IG +PLIIRPAFT+GGTGGGI
Sbjct: 123  IEKAEDRKLFNEAMAKIGVAVCPSGTASTLDESKAIALQIGTYPLIIRPAFTMGGTGGGI 182

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEFE + + G+ AS  SQ+L+++SLLGWKEYELEVMRDLADNVVIICSIEN+DPMG
Sbjct: 183  AYNQEEFEEMAQVGIDASPVSQILIDQSLLGWKEYELEVMRDLADNVVIICSIENLDPMG 242

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            +HTGDSITVAPAQTLTDKEYQRLRD +I IIREIGVE GGSN+QFAVNPV+G+V+VIEMN
Sbjct: 243  IHTGDSITVAPAQTLTDKEYQRLRDMAIKIIREIGVETGGSNIQFAVNPVNGDVVVIEMN 302

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRF 447
            PRVSRSSAL+SKATGFPIAK+AAKL+VGY+LD++ NDITKKTPA FEP+IDYVVTKIPRF
Sbjct: 303  PRVSRSSALSSKATGFPIAKIAAKLAVGYTLDELQNDITKKTPACFEPTIDYVVTKIPRF 362

Query: 448  AFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDWE 507
            AFEKFPGSE +LTTQMKSVGEAMA+GRTF ESFQKALRSLE G +GWGC   ++L    E
Sbjct: 363  AFEKFPGSEAVLTTQMKSVGEAMAIGRTFNESFQKALRSLETGRAGWGCDKAEKLP-SGE 421

Query: 508  QLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSVS 567
            Q++  LR PNP+R+ ++  AM+ GM  +EI+EL+ ID WFL + +EL+++E+FL    + 
Sbjct: 422  QIRAQLRTPNPERIFSVRHAMQLGMSNEEIYELTAIDPWFLDKLQELLEIEKFLKRTPLK 481

Query: 568  NMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTPY 627
             +TK   Y+VKR GFSD+QIA+ATK+ E EVR  R  L VIP YK VDTCAAEFEA TPY
Sbjct: 482  QLTKAQMYDVKRNGFSDRQIAYATKTKEDEVRTYRKQLEVIPVYKTVDTCAAEFEALTPY 541

Query: 628  MYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSNP 687
             YS+Y+ E E  PT K KV+ILGGGPNRIGQGIEFDYCCCH ++SL  AGYETIM+NSNP
Sbjct: 542  YYSTYEEETEVLPTDKPKVMILGGGPNRIGQGIEFDYCCCHAAYSLHDAGYETIMVNSNP 601

Query: 688  ETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHRL 747
            ETVSTDYDTSDRLYFEPLT EDVLN+I+ E P GIIVQFGGQTPLKL++P+ +YL     
Sbjct: 602  ETVSTDYDTSDRLYFEPLTKEDVLNIIEAENPVGIIVQFGGQTPLKLAIPLQEYLQ---- 657

Query: 748  PSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEIGY 807
               + + + +IWGTSPDSID AE+RERF  I++EL+I QP  G+A+S  DAL +AK IGY
Sbjct: 658  ---NSNSITKIWGTSPDSIDMAENRERFEKILQELNIAQPPNGMARSYEDALIVAKRIGY 714

Query: 808  PVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALADS 867
            PVVVRPSYVLGGRAMEIVY+D  L  Y+  AV+V+P+ P+LIDK+L +AIE+DVDA+AD 
Sbjct: 715  PVVVRPSYVLGGRAMEIVYSDTELERYMTFAVQVEPDHPILIDKFLENAIEVDVDAIADH 774

Query: 868  CGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNCQ 927
             GNVVIGGIMEHIEQAG+HSGDSAC +P+ ++S + L+ I  WT++LA+ L+V GLMN Q
Sbjct: 775  TGNVVIGGIMEHIEQAGIHSGDSACSLPSISLSPAVLNQIRLWTVQLAQALSVVGLMNIQ 834

Query: 928  YAIT----TSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVI 983
            +A+      S  VY+LEANPRASRTVPFVSKA G  LAK A+L+MSGK+L ++ FTKEVI
Sbjct: 835  FAVVGANGYSPQVYILEANPRASRTVPFVSKATGVQLAKLASLIMSGKTLEEVKFTKEVI 894

Query: 984  PKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGT 1043
            P H++VKEAVLPF KF G D +LGPEMRSTGEVMGID  F  AFAKA++ AG+KLPL GT
Sbjct: 895  PSHIAVKEAVLPFSKFPGTDTILGPEMRSTGEVMGIDSDFGRAFAKAELGAGEKLPLQGT 954

Query: 1044 VFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDM 1103
            VF+S++D  KP    + K F+ +GF I++T GT   L+ +G+ ++ VLK+HEGRPH  D 
Sbjct: 955  VFVSMSDRDKPLAADVVKEFIKLGFTIMATQGTRQVLQEQGLEIQSVLKLHEGRPHVLDA 1014

Query: 1104 VANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTVT 1163
            + N +IQ+++ T SG+     D   +RR  L YK+P+ITT++GA A A AI SL++ T+ 
Sbjct: 1015 IKNQKIQLIINTPSGEEA-HADSKLIRRTALGYKIPIITTIAGARATAAAIYSLQNTTLD 1073

Query: 1164 MTALQDF 1170
            +  +Q++
Sbjct: 1074 VKVIQEY 1080


>gi|443309776|ref|ZP_21039463.1| carbamoyl-phosphate synthase, large subunit [Synechocystis sp. PCC
            7509]
 gi|442780169|gb|ELR90375.1| carbamoyl-phosphate synthase, large subunit [Synechocystis sp. PCC
            7509]
          Length = 1093

 Score = 1501 bits (3886), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 738/1098 (67%), Positives = 887/1098 (80%), Gaps = 15/1098 (1%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            +R DL KIL+LG+GPIVIGQACEFDYSGTQAC AL+EEGYEV+L+NSNPATIMTDP  AD
Sbjct: 3    RRDDLHKILLLGSGPIVIGQACEFDYSGTQACIALREEGYEVVLVNSNPATIMTDPETAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
            RTYI P+TPELVE+V+ KERPDALLPTMGGQTALN+AV+LA+SGALEKYGVELIGAKL A
Sbjct: 63   RTYIEPLTPELVEKVIAKERPDALLPTMGGQTALNIAVSLAKSGALEKYGVELIGAKLPA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I+KAEDR LFK+AM  IGV   P G  +T++E  ++A  IG +PLIIRPAFT+GG+GGGI
Sbjct: 123  IEKAEDRQLFKEAMDRIGVAMCPCGTASTVEESKAVARTIGSYPLIIRPAFTMGGSGGGI 182

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEFE + + G+ AS  SQ+L++KSLLGWKEYELEVMRDLADNVVIICSIEN+DPMG
Sbjct: 183  AYNQEEFEEMAQVGIDASPVSQILIDKSLLGWKEYELEVMRDLADNVVIICSIENLDPMG 242

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            +HTGDSITVAPAQTLTDKEYQRLRD +I IIREIGVE GGSN+QFA+NPV+G+ +VIEMN
Sbjct: 243  IHTGDSITVAPAQTLTDKEYQRLRDAAIKIIREIGVETGGSNIQFAINPVNGDFIVIEMN 302

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRF 447
            PRVSRSSALASKATGFPIAK AAKL+VGY+LD+I NDITKKTPASFEP+IDYVVTKIPRF
Sbjct: 303  PRVSRSSALASKATGFPIAKFAAKLAVGYTLDEITNDITKKTPASFEPTIDYVVTKIPRF 362

Query: 448  AFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDWE 507
            AFEKFPGSEP+LTTQMKSVGEAMA+GRTF ESFQKALRSLE G +GWGC ++KE     E
Sbjct: 363  AFEKFPGSEPVLTTQMKSVGEAMAIGRTFNESFQKALRSLETGRAGWGC-DIKEKLPSGE 421

Query: 508  QLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSVS 567
             ++  LR PNP+R+ A+  AM  GM V EI+EL+ ID WFL + + LI+ E+F+    ++
Sbjct: 422  HIRPQLRTPNPERIFAVRQAMLLGMSVQEIYELTGIDPWFLDKMQILIETEKFIKKTPLN 481

Query: 568  NMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTPY 627
             +TK   Y VKR GFSD+QIAFATK+TE EVR  R  LGVIP YK VDTCAAEFEA TPY
Sbjct: 482  QLTKAQMYNVKREGFSDRQIAFATKTTEDEVRTYRKQLGVIPVYKTVDTCAAEFEAFTPY 541

Query: 628  MYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSNP 687
             YS+Y+ E E  PT K KV+ILGGGPNRIGQGIEFDYCCCH S++L++AG+ETIM+NSNP
Sbjct: 542  HYSTYEEESEVRPTDKPKVMILGGGPNRIGQGIEFDYCCCHASYALKAAGFETIMVNSNP 601

Query: 688  ETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHRL 747
            ETVSTDYDTSDRLYFEPLT+EDVLNVI+ E P GIIVQFGGQTPLKL+LP+ +YL     
Sbjct: 602  ETVSTDYDTSDRLYFEPLTLEDVLNVIETENPIGIIVQFGGQTPLKLALPLQRYL----- 656

Query: 748  PSASGDGL--VRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEI 805
             +A+ D L   +IWGTSPDSID AEDRERF+ I+ EL+I QP  GIA++  DAL +A +I
Sbjct: 657  -AANSDTLSTTKIWGTSPDSIDTAEDRERFDQILNELNIAQPANGIARNFDDALIVAGKI 715

Query: 806  GYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALA 865
            GYPVVVRPSYVLGGRAMEIVY+D  L  Y+  AV+V+P+ P+LIDK+L +AIE+DVDA+A
Sbjct: 716  GYPVVVRPSYVLGGRAMEIVYSDADLERYMAYAVKVEPDHPILIDKFLENAIEVDVDAIA 775

Query: 866  DSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMN 925
            D  G VVIGGIMEHIEQAG+HSGDSAC +PT ++ ++ LD I +WT +LAK LNV GLMN
Sbjct: 776  DHTGKVVIGGIMEHIEQAGIHSGDSACSLPTISLPTAVLDKIRTWTTQLAKALNVIGLMN 835

Query: 926  CQYAITTSG----DVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKE 981
             Q+A+  +      VY++EANPRASRTVPFVSK  G PLAK A+LVMSGK+L  L FT E
Sbjct: 836  IQFAVVNAHSYNPQVYIIEANPRASRTVPFVSKTTGVPLAKLASLVMSGKTLESLNFTSE 895

Query: 982  VIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLS 1041
              P H++VKEAVLPF KF G D +LGPEMRSTGEVMGID  F  AFAK ++ AGQ LPLS
Sbjct: 896  PTPTHIAVKEAVLPFNKFPGTDTILGPEMRSTGEVMGIDSDFGRAFAKGELGAGQVLPLS 955

Query: 1042 GTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIA-VERVLKMHEGRPHA 1100
            GT+F+S++D  K  +  + K F+++GF I++T GT   L+  G+  VE VLK+HEGRPH 
Sbjct: 956  GTLFVSMSDRDKVLVVPVIKEFIELGFHILATDGTRRVLQEHGLKEVELVLKLHEGRPHV 1015

Query: 1101 GDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSN 1160
             D + N  IQ+++ T SG+   Q D   +RR  + YK+P+ITT++GA A A AIRS+++ 
Sbjct: 1016 LDAMKNHNIQLIINTPSGEEA-QTDARLIRRTAITYKIPIITTIAGAKATAAAIRSMQTT 1074

Query: 1161 TVTMTALQDFFDVETASG 1178
             + + ALQD+     A+ 
Sbjct: 1075 PLDVKALQDYLQPNIAAA 1092


>gi|334121283|ref|ZP_08495355.1| carbamoyl-phosphate synthase, large subunit [Microcoleus vaginatus
            FGP-2]
 gi|333455218|gb|EGK83873.1| carbamoyl-phosphate synthase, large subunit [Microcoleus vaginatus
            FGP-2]
          Length = 1103

 Score = 1501 bits (3885), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 728/1107 (65%), Positives = 880/1107 (79%), Gaps = 32/1107 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            +R DL+KIL++G+GPIVIGQACEFDYSGTQACKAL+EEG+EV+L+NSNPATIMTDP  AD
Sbjct: 3    RRQDLKKILLIGSGPIVIGQACEFDYSGTQACKALREEGFEVVLVNSNPATIMTDPETAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
            R YI P+TP ++EQ++ KERP A+LPTMGGQTALNLAVA+A++G LEKY VELIGAKL A
Sbjct: 63   RIYIEPLTPAILEQIIAKERPQAILPTMGGQTALNLAVAVAKNGVLEKYNVELIGAKLPA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I+ AEDR LFK+AM  IGV   PSGI NTLDE  +I ++IG +PLIIRPAFT+GGTGGGI
Sbjct: 123  IEMAEDRLLFKEAMARIGVAVCPSGIANTLDEAKAIGHQIGSYPLIIRPAFTMGGTGGGI 182

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            +YN+EEFE + + G+ AS  SQ+L+E+SL+GWKEYELEVMRDLADNVVIICSIEN+DPMG
Sbjct: 183  SYNQEEFEEMAQGGIDASPVSQILIEQSLIGWKEYELEVMRDLADNVVIICSIENLDPMG 242

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQRLRD S+ IIREIGVE GGSN+QFAVNPV+G+ +VIEMN
Sbjct: 243  VHTGDSITVAPAQTLTDKEYQRLRDASVKIIREIGVETGGSNIQFAVNPVNGDFIVIEMN 302

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRF 447
            PRVSRSSALASKATGFPIAKMAAKL+VGYSLD+I NDITKKTPASFEP+IDYVVTKIPRF
Sbjct: 303  PRVSRSSALASKATGFPIAKMAAKLAVGYSLDEISNDITKKTPASFEPTIDYVVTKIPRF 362

Query: 448  AFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDWE 507
            AFEKFPGSEP LTTQMKSVGE MA+GR+F ESFQKALR LE G +G+GC   ++L    E
Sbjct: 363  AFEKFPGSEPTLTTQMKSVGEVMAIGRSFNESFQKALRGLETGRAGFGCDKPEKLP-SLE 421

Query: 508  QLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSVS 567
            Q++  LR PNPDR+  +  AM  GM V++I E + ID WFL + +EL++ E+FL    + 
Sbjct: 422  QIRAGLRTPNPDRIFTVRHAMMMGMSVEDIFEFTGIDPWFLDKMQELLETEKFLKRTRLD 481

Query: 568  NMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTPY 627
             +TK+  +EVK+ GFSD+QIA+ATK++E +VR  R  LGV+P YK VDTCAAEFEA TPY
Sbjct: 482  QLTKETMFEVKQLGFSDRQIAYATKTSEDQVRAYRKQLGVVPIYKTVDTCAAEFEAFTPY 541

Query: 628  MYSSYDF-----------------------ECESAPTQKKKVLILGGGPNRIGQGIEFDY 664
             YS+Y+                        E E   + K+KV+ILGGGPNRIGQGIEFDY
Sbjct: 542  YYSTYEAGAAIWDLGDEEKKISPVGHSLAPESEVLSSTKRKVMILGGGPNRIGQGIEFDY 601

Query: 665  CCCHTSFSLQSAGYETIMMNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIV 724
            CCCH S+SL   G+ETIM+NSNPETVSTDYDTSDRLYFEPLT EDVLN+I+ E PEGII+
Sbjct: 602  CCCHASYSLGEDGFETIMVNSNPETVSTDYDTSDRLYFEPLTKEDVLNIIEAENPEGIII 661

Query: 725  QFGGQTPLKLSLPIHQYLDEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSI 784
            QFGGQTPLKL+LP+ + L+ H       D   +IWGTSPDSID AEDRERF  I++EL I
Sbjct: 662  QFGGQTPLKLALPLQKALENHP------DVQTKIWGTSPDSIDTAEDRERFEKILRELDI 715

Query: 785  EQPKGGIAKSEADALAIAKEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPE 844
            +Q   G+A+S  DAL +A+ IGYPVVVRPSYVLGGRAMEIVY+D  L  Y+  AV V+P+
Sbjct: 716  QQAANGLARSFEDALIVAQRIGYPVVVRPSYVLGGRAMEIVYSDTELERYMTYAVLVEPD 775

Query: 845  RPVLIDKYLSDAIEIDVDALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCL 904
             P+LIDK+L +AIE+DVDA+AD  GNV IGGIMEHIE+AG+HSGDSAC IP +T+S + L
Sbjct: 776  HPILIDKFLENAIEVDVDAIADVTGNVTIGGIMEHIEEAGIHSGDSACSIPYQTLSDAAL 835

Query: 905  DTISSWTIKLAKRLNVCGLMNCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYA 964
             TI  WT++LAK L V GLMN Q+A+     V++LEANPRASRTVPFVSKAIG PLAK A
Sbjct: 836  ATIRRWTVELAKSLKVIGLMNIQFAVQGE-QVFILEANPRASRTVPFVSKAIGVPLAKMA 894

Query: 965  ALVMSGKSLNDLGFTKEVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFP 1024
            + VMSGK+L  LGFT+E+IP HVSVKEAVLPF KF G D LLGPEMRSTGEVMGID  F 
Sbjct: 895  SRVMSGKTLEALGFTEEIIPIHVSVKEAVLPFAKFPGADTLLGPEMRSTGEVMGIDTDFG 954

Query: 1025 IAFAKAQIAAGQKLPLSGTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKG 1084
             AFAKAQ+ AGQ +PL GTV +S+ D  K  +  + K FL++GFK+V+T GT   L+ +G
Sbjct: 955  KAFAKAQLGAGQMMPLFGTVLVSMRDRDKLAVVPVVKEFLELGFKVVATHGTRKVLQEQG 1014

Query: 1085 IAVERVLKMHEGRPHAGDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTV 1144
            + V+  LKMHEGRP+  D + N +IQ+++ T SG+   + DG+ +RR  L YK+P+ITT+
Sbjct: 1015 LEVDLELKMHEGRPNLLDSIKNEKIQLIITTPSGEE-SRADGIFIRRTALTYKIPIITTI 1073

Query: 1145 SGALANAEAIRSLKSNTVTMTALQDFF 1171
            +GA A A  IRSLKSN + + A+QD++
Sbjct: 1074 AGAKATAAGIRSLKSNPMEVKAIQDYY 1100


>gi|170079083|ref|YP_001735721.1| carbamoyl phosphate synthase large subunit [Synechococcus sp. PCC
            7002]
 gi|169886752|gb|ACB00466.1| carbamoyl-phosphate synthase, large subunit [Synechococcus sp. PCC
            7002]
          Length = 1090

 Score = 1500 bits (3884), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 728/1094 (66%), Positives = 877/1094 (80%), Gaps = 16/1094 (1%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            +R D++KILILG+GPIVIGQACEFDYSGTQ+CKAL+EEGYEV+L+NSNPATIMTDP  AD
Sbjct: 3    RRDDIKKILILGSGPIVIGQACEFDYSGTQSCKALREEGYEVVLVNSNPATIMTDPETAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
            RTY+ P+TPE+V +V+EKERPDALLPTMGGQTALN AV+LA++G LEK+ VELIGAKL+A
Sbjct: 63   RTYVEPITPEIVAKVIEKERPDALLPTMGGQTALNTAVSLAKNGTLEKFNVELIGAKLEA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I+ AEDR+LFK+AM  IGV   PSGI +T++E   +A EIG +PLIIRPAFT+GG+GGGI
Sbjct: 123  IEMAEDRNLFKEAMARIGVPVCPSGIASTMEEAREVAIEIGSYPLIIRPAFTMGGSGGGI 182

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EE+E ICK+GL AS  SQ+LVEKSLLGWKEYELEVMRDLADNVVIICSIEN+DPMG
Sbjct: 183  AYNQEEYEKICKSGLEASPVSQILVEKSLLGWKEYELEVMRDLADNVVIICSIENIDPMG 242

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQRLRDYS+ IIREIGVE GGSN+QF+VNP++GEV+VIEMN
Sbjct: 243  VHTGDSITVAPAQTLTDKEYQRLRDYSLKIIREIGVETGGSNIQFSVNPLNGEVIVIEMN 302

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRF 447
            PRVSRSSALASKATGFPIAK AAKL+VGY+LD+IPNDITK+TPASFEP+IDYVVTKIPRF
Sbjct: 303  PRVSRSSALASKATGFPIAKFAAKLAVGYTLDEIPNDITKQTPASFEPTIDYVVTKIPRF 362

Query: 448  AFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCS-------NVK 500
            AFEKFPGSEP+LTTQMKSVGEAMA+GRTFQESFQKALRSLE G  G+GC+         +
Sbjct: 363  AFEKFPGSEPILTTQMKSVGEAMAIGRTFQESFQKALRSLETGRYGFGCAPQSGSGGERQ 422

Query: 501  ELDWDWEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQF 560
            E       +  SLR PNPDR+  IY A+K GM V+EIH+L+ ID WFL +  EL+  E+F
Sbjct: 423  ETLPSLSHISTSLRTPNPDRIFTIYQALKLGMTVEEIHDLTAIDIWFLDKMAELLVTERF 482

Query: 561  LLTQSVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAE 620
            +    ++ ++  D   +K++GFSD+QIA+ATK+ E  VR  R S+GV+P YK VDTCAAE
Sbjct: 483  MKQTPLTEISAADMRVIKQQGFSDRQIAYATKTNEDAVRAYRKSIGVLPVYKLVDTCAAE 542

Query: 621  FEANTPYMYSSYD-FECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYE 679
            FEA TPY YS+YD  E E  P+ + K +ILGGGPNRIGQGIEFDYCCCH +FSL  AGYE
Sbjct: 543  FEAFTPYYYSTYDGTESEVEPSDRPKAMILGGGPNRIGQGIEFDYCCCHAAFSLSDAGYE 602

Query: 680  TIMMNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIH 739
            TIM+NSNPETVSTDYDTSDRLYFEPLT EDVLN+I+ E P G+I+QFGGQTPLKL++P+ 
Sbjct: 603  TIMVNSNPETVSTDYDTSDRLYFEPLTKEDVLNIIEAENPAGVIIQFGGQTPLKLAVPLD 662

Query: 740  QYLDEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADAL 799
             YL+    P  +     +IWGT PD+ID AEDRERF  I+ +L I QP  GIA+   +A 
Sbjct: 663  NYLNAGDCPVDT-----KIWGTQPDAIDTAEDRERFEKILHDLEILQPANGIARDYKEAQ 717

Query: 800  AIAKEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEI 859
             IA  +GYPVVVRPSYVLGGRAMEIVY+DE L  Y++ AV+V+P+ P+L+DK+L +AIE+
Sbjct: 718  KIANRVGYPVVVRPSYVLGGRAMEIVYSDEELDHYMKYAVQVEPDHPILVDKFLENAIEV 777

Query: 860  DVDALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLN 919
            DVDAL D  G VVIGGIMEHIE+AG+HSGDSAC IP  ++    L TI  WT+KLA+ L 
Sbjct: 778  DVDALCDHTGKVVIGGIMEHIEEAGIHSGDSACSIPHTSLPDEVLSTIREWTVKLAQTLK 837

Query: 920  VCGLMNCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFT 979
            V GLMN QYA+  +  VY+LEANPRASRTVP+VSKA G PLAK A+LVMSGK+L++LG  
Sbjct: 838  VVGLMNIQYAVKDN-QVYILEANPRASRTVPYVSKATGRPLAKIASLVMSGKTLDELGID 896

Query: 980  KEVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLP 1039
             E+ PKHV+VKEAVLPF KF+G D LLGPEMRSTGEVMGID+ F  AFAKA+I AG +L 
Sbjct: 897  GEITPKHVAVKEAVLPFNKFEGTDTLLGPEMRSTGEVMGIDVDFGKAFAKAEIGAGVELA 956

Query: 1040 LSGTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIA-VERVLKMHEGRP 1098
              GTVF+S+ND  K     + K  +++GF+IV+TSGT   L   GI  VE VLK+HEGRP
Sbjct: 957  TEGTVFVSMNDRNKEAAVPVVKDLMELGFRIVATSGTRQVLLENGIEDVELVLKLHEGRP 1016

Query: 1099 HAGDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLK 1158
            H  D + NG IQ ++ T SG+   Q DG  +RR  L YK+P+ITT++GA A   AIRSL+
Sbjct: 1017 HVVDWMKNGWIQFIINTPSGEE-SQADGRMIRRTALDYKLPIITTLAGARATVAAIRSLQ 1075

Query: 1159 SNTVTMTALQDFFD 1172
             + + +  LQ++ +
Sbjct: 1076 EHPLDVKPLQEYIN 1089


>gi|332710439|ref|ZP_08430386.1| carbamoyl-phosphate synthase large subunit [Moorea producens 3L]
 gi|332350770|gb|EGJ30363.1| carbamoyl-phosphate synthase large subunit [Moorea producens 3L]
          Length = 1085

 Score = 1500 bits (3884), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 725/1084 (66%), Positives = 886/1084 (81%), Gaps = 3/1084 (0%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            +R D+ KIL+LG+GPIVIGQACEFDYSGTQACKAL+EEGYEV+L+NSNPA+IMTDP  AD
Sbjct: 3    RRDDIHKILLLGSGPIVIGQACEFDYSGTQACKALREEGYEVVLVNSNPASIMTDPETAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
            RTYI P+TPE+VE+V+EKE+P ALLPTMGGQTALN+AV LA++G LEK+GVELIGAKL+A
Sbjct: 63   RTYIEPLTPEIVEKVIEKEQPCALLPTMGGQTALNIAVDLAKNGVLEKHGVELIGAKLEA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I+KAEDR LFK+AM+ IGV   PSGI N L E  +IA +IG +PLIIRPAFTLGG+GGGI
Sbjct: 123  IEKAEDRLLFKEAMERIGVGVCPSGIANNLKEAKAIAQKIGSYPLIIRPAFTLGGSGGGI 182

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYNKEE+E + + GL AS  SQ+LVE+SLLGWKEYELEVMRDLADNVVIICSIENVDPMG
Sbjct: 183  AYNKEEYETMAQGGLDASPVSQILVEQSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 242

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            +HTGDSITVAPAQTLTDKEYQRLRDYSI IIREIGVE GGSN+QFAVNP++G+V+VIEMN
Sbjct: 243  IHTGDSITVAPAQTLTDKEYQRLRDYSIKIIREIGVETGGSNIQFAVNPINGQVIVIEMN 302

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRF 447
            PRVSRSSALASKATGFPIAK AAKL+VGY+LD+IPNDITK+TPASFEP+IDYVVTK+PRF
Sbjct: 303  PRVSRSSALASKATGFPIAKFAAKLAVGYTLDEIPNDITKQTPASFEPTIDYVVTKVPRF 362

Query: 448  AFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDWE 507
            AFEKFPGS+P+LTTQMKSVGEAMA+GRTF ESFQKALRSLE G  GWGC   ++L    E
Sbjct: 363  AFEKFPGSKPILTTQMKSVGEAMAIGRTFLESFQKALRSLETGRFGWGCDRKEKLP-SLE 421

Query: 508  QLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSVS 567
            Q++Y LR PNP+R+  +   +  GM  +E+ EL+ ID WFL +  EL++  +FL    + 
Sbjct: 422  QVRYGLRTPNPERIFTVGHGLMLGMTREEVQELTGIDPWFLDKLLELLETSKFLKRTPLE 481

Query: 568  NMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTPY 627
             + K+  + VKR+GFSD+QIAFATK++E +VR+ R  LGV+P+YK VDTCAAEFEA TPY
Sbjct: 482  TLNKEQLWAVKRQGFSDRQIAFATKTSEDQVRQYRKHLGVVPAYKLVDTCAAEFEAFTPY 541

Query: 628  MYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSNP 687
             YS+Y+ E E  P+ ++KV+ILGGGPNRIGQGIEFDYCCCH S++L   G+ETIM+NSNP
Sbjct: 542  YYSTYEEESEVIPSDQRKVMILGGGPNRIGQGIEFDYCCCHASYALSKQGFETIMVNSNP 601

Query: 688  ETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHRL 747
            ETVSTDYDTSDRLYFEPLT EDVLN+I+ E PEGIIVQFGGQTPLKL++P+ + L   RL
Sbjct: 602  ETVSTDYDTSDRLYFEPLTKEDVLNIIEAENPEGIIVQFGGQTPLKLAVPLQEALKVSRL 661

Query: 748  PSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEIGY 807
               +   + +IWGTSPDSID AEDRERF  I+++L I+QP  GIA+S  +AL +AK I Y
Sbjct: 662  KVGNQQLVTQIWGTSPDSIDVAEDRERFEKILRKLDIKQPPNGIARSYGEALEVAKRISY 721

Query: 808  PVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALADS 867
            PVVVRPSYVLGGRAMEIVY+DE L  Y++ AV+V+PE P+LIDK+L +A+E+DVDA+AD 
Sbjct: 722  PVVVRPSYVLGGRAMEIVYSDEDLKRYMKFAVQVEPEHPILIDKFLENAVEVDVDAIADH 781

Query: 868  CGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNCQ 927
             G VVIGGIMEHIEQAG+HSGDSAC +P  +++   L+T+ +WT +LAK L V GLMN Q
Sbjct: 782  TGRVVIGGIMEHIEQAGIHSGDSACSLPHTSLTPVALETMRTWTYQLAKALKVVGLMNIQ 841

Query: 928  YAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPKHV 987
            +A+     VY+LEANPRASRT+P+VSKA G PLA  A+ VMS ++L  LG T+E  PKH+
Sbjct: 842  FAVQGE-TVYILEANPRASRTIPYVSKATGVPLAGLASRVMSRETLESLGLTEEASPKHI 900

Query: 988  SVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVFLS 1047
            +VKEAVLPFEKF G D LLGPEMRSTGEVMGID  F  AFAKA++AAGQ+LPLSGTVF+S
Sbjct: 901  AVKEAVLPFEKFPGTDTLLGPEMRSTGEVMGIDTDFGKAFAKAELAAGQRLPLSGTVFVS 960

Query: 1048 LNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVANG 1107
             N   K ++  +AK  +++GF++V+T GT   L+  G+ VE VLK+HEGRPH  D + N 
Sbjct: 961  TNHRDKLNVVPVAKDLIELGFELVATDGTRKVLQEHGLDVELVLKLHEGRPHVLDWIKNQ 1020

Query: 1108 QIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTVTMTAL 1167
            +IQ+++ T SG+     DG  +RR  L YK+P++TT++ A A A AIRSL+S  + + AL
Sbjct: 1021 KIQLIINTPSGEDA-YADGRLIRRTALGYKIPIVTTIASAKATAAAIRSLQSQPLGVKAL 1079

Query: 1168 QDFF 1171
            QD+ 
Sbjct: 1080 QDYI 1083


>gi|443323144|ref|ZP_21052154.1| carbamoyl-phosphate synthase, large subunit [Gloeocapsa sp. PCC
            73106]
 gi|442787199|gb|ELR96922.1| carbamoyl-phosphate synthase, large subunit [Gloeocapsa sp. PCC
            73106]
          Length = 1081

 Score = 1498 bits (3878), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 732/1086 (67%), Positives = 879/1086 (80%), Gaps = 10/1086 (0%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            +R DL+KIL+LG+GPIVIGQACEFDYSGTQACKAL+EEGYEVIL+NSNPA+IMTDP +A+
Sbjct: 3    RREDLKKILLLGSGPIVIGQACEFDYSGTQACKALREEGYEVILVNSNPASIMTDPDMAN 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
            +TYI P+ PE+V +++ KERPDALLPTMGGQTALNLAV LA++G LE+YGVELIGAKL+A
Sbjct: 63   KTYIEPLVPEIVAKIIAKERPDALLPTMGGQTALNLAVTLAKTGVLEEYGVELIGAKLEA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I+KAEDR LFKQAM  IGV   PSGI N L +  +IA EIG +PLIIRPAFT+GGTGGGI
Sbjct: 123  IEKAEDRLLFKQAMNKIGVPVCPSGIANNLAQAKAIALEIGSYPLIIRPAFTMGGTGGGI 182

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EE+E + + G+ +S  SQ+LVEKSLLGWKEYELEVMRDLADNVVIICSIEN+DPMG
Sbjct: 183  AYNQEEYEVMAQFGIDSSPVSQILVEKSLLGWKEYELEVMRDLADNVVIICSIENIDPMG 242

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQRLRD S  IIREIGVE GGSN+QFA+NPV+GE++VIEMN
Sbjct: 243  VHTGDSITVAPAQTLTDKEYQRLRDASKKIIREIGVETGGSNIQFAINPVNGEMVVIEMN 302

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRF 447
            PRVSRSSALASKATGFPIAK AAKL+VGY+LD+IPNDIT+KTPASFEP+IDYVVTKIPRF
Sbjct: 303  PRVSRSSALASKATGFPIAKFAAKLAVGYTLDEIPNDITQKTPASFEPTIDYVVTKIPRF 362

Query: 448  AFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDWE 507
            AFEKFPGSE +LTTQMKSVGE MA+GRTF ESFQKALRSLE G  G+GC   +E+  +  
Sbjct: 363  AFEKFPGSEAILTTQMKSVGEVMAIGRTFNESFQKALRSLEIGRYGFGCDR-EEILPNVT 421

Query: 508  QLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSVS 567
            QL+ +LR PNP+R+  ++ A++ GM V+EI++L+ ID WFL + +EL++V++F+    + 
Sbjct: 422  QLRSNLRKPNPERIFTVHQALQLGMAVEEIYQLTGIDPWFLDKMEELVEVQKFIKRTPLK 481

Query: 568  NMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTPY 627
             ++  D   +K++GFSD+QIAFATK+TE +VR  R  LG+IP YK VDTCAAEFEA TPY
Sbjct: 482  EISAADMRLIKQQGFSDRQIAFATKTTEDQVRTYRKQLGIIPVYKVVDTCAAEFEAFTPY 541

Query: 628  MYSSYDF-ECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSN 686
             YS+Y+  E E  P+ K KV+ILGGGPNRIGQGIEFDYCCCH +F+L  AG+ETIM+NSN
Sbjct: 542  YYSTYESGESEVTPSDKPKVMILGGGPNRIGQGIEFDYCCCHAAFALTDAGFETIMVNSN 601

Query: 687  PETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHR 746
            PETVSTDYDTSDRLYFEPLT EDVLN+I+ E PEGII+QFGGQTPLKL+LP+ QYL    
Sbjct: 602  PETVSTDYDTSDRLYFEPLTKEDVLNIIETENPEGIIIQFGGQTPLKLALPLQQYLQNPD 661

Query: 747  LPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEIG 806
                +     +IWGT PDSID AEDRERF  I++EL I+QP  GIA+S  +AL+IA  IG
Sbjct: 662  CQVQT-----KIWGTPPDSIDIAEDRERFEKILRELDIKQPPNGIARSYEEALSIAGRIG 716

Query: 807  YPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALAD 866
            YPVVVRPSYVLGGRAMEIVYTD  L  Y+ NAV+V+P+ P+LIDK+L +AIE+DVDALAD
Sbjct: 717  YPVVVRPSYVLGGRAMEIVYTDNQLQYYMTNAVQVEPDHPILIDKFLENAIEVDVDALAD 776

Query: 867  SCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNC 926
            S G VVIGGIMEHIE+AGVHSGDSAC IP  ++S S + TI  WT KLA+ L V GLMN 
Sbjct: 777  STGKVVIGGIMEHIEEAGVHSGDSACSIPYTSLSDSVVATIREWTTKLAQSLKVIGLMNI 836

Query: 927  QYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPKH 986
            QYA+     VY+LEANPRASRTVP+VSKA G PLAK A+LVMSGK+L  LG TKE+IP H
Sbjct: 837  QYAVQGE-QVYILEANPRASRTVPYVSKATGVPLAKIASLVMSGKTLESLGVTKEIIPSH 895

Query: 987  VSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVFL 1046
            ++VKEAVLPF KF G D LLGPEMRSTGEVMGID+ F  AFAKA++AAG  L   GTVF+
Sbjct: 896  IAVKEAVLPFAKFPGTDTLLGPEMRSTGEVMGIDVDFGKAFAKAELAAGVLLATEGTVFV 955

Query: 1047 SLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGI-AVERVLKMHEGRPHAGDMVA 1105
            S+ND  K  +  + K  +++GFK+V+TSGT   L   GI  VE VLK+HEGRPH  D + 
Sbjct: 956  SMNDRDKVAVVPVVKDLIELGFKVVATSGTRRVLLEYGIEEVELVLKLHEGRPHVIDWIK 1015

Query: 1106 NGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTVTMT 1165
            N +IQ +  T +G    Q D   +RR  L YK+P+ITT++GA A   A+RSL+S  + + 
Sbjct: 1016 NQRIQFIFNTPTGGE-SQADDRLIRRTALDYKLPIITTIAGAKATVAALRSLQSGPLEVK 1074

Query: 1166 ALQDFF 1171
            ALQ++ 
Sbjct: 1075 ALQEYL 1080


>gi|443327543|ref|ZP_21056166.1| carbamoyl-phosphate synthase, large subunit [Xenococcus sp. PCC 7305]
 gi|442792878|gb|ELS02342.1| carbamoyl-phosphate synthase, large subunit [Xenococcus sp. PCC 7305]
          Length = 1078

 Score = 1495 bits (3871), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 726/1086 (66%), Positives = 881/1086 (81%), Gaps = 13/1086 (1%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            +R D++KIL+LG+GPIVIGQACEFDYSGTQACKAL+EEGYEV+LINSNPA+IMTDP +A+
Sbjct: 3    RRNDIQKILLLGSGPIVIGQACEFDYSGTQACKALREEGYEVVLINSNPASIMTDPEMAN 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
            RTYI P+TPE+V +V+ KE+PDALLPTMGGQTALN+AV+LA++G LE+Y VELIGAKL A
Sbjct: 63   RTYIEPLTPEIVAKVIAKEKPDALLPTMGGQTALNIAVSLAKNGVLEQYNVELIGAKLPA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I+KAEDR LFK+AM  IGV   PSGI   + E   IA EIG +PLIIRPAFTLGGTGGGI
Sbjct: 123  IEKAEDRLLFKEAMAKIGVPVCPSGIAENMTEAHEIAAEIGSYPLIIRPAFTLGGTGGGI 182

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EE+E + + G+  S  +Q+LVEKSLLGWKEYELEVMRDLADNVVIICSIEN+DPMG
Sbjct: 183  AYNQEEYEKMAQFGIECSPVNQILVEKSLLGWKEYELEVMRDLADNVVIICSIENIDPMG 242

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            +HTGDSITVAPAQTLTDKEYQRLRDYS+AIIREIGVE GGSN+QFA NP++G+V+VIEMN
Sbjct: 243  IHTGDSITVAPAQTLTDKEYQRLRDYSLAIIREIGVETGGSNIQFATNPLNGDVIVIEMN 302

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRF 447
            PRVSRSSALASKATGFPIAK AAKL+VGY+LD+IPNDITKKTPASFEP+IDYVVTKIPRF
Sbjct: 303  PRVSRSSALASKATGFPIAKFAAKLAVGYTLDEIPNDITKKTPASFEPTIDYVVTKIPRF 362

Query: 448  AFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDWE 507
            AFEKFPGSE +LTTQMKSVGEAM++GRTF ESFQKALRSLE G  G+G      L     
Sbjct: 363  AFEKFPGSEAILTTQMKSVGEAMSIGRTFCESFQKALRSLETGRYGFGSDRKGPLP-TIS 421

Query: 508  QLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSVS 567
            Q++ SLR PNP+R+ +IY  +K GM  +EIH+L+ ID WFL + +++++ E+ L   S++
Sbjct: 422  QVRSSLRTPNPERIFSIYQGLKLGMSPEEIHDLTAIDIWFLDKLQDILETEKALQRTSLT 481

Query: 568  NMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTPY 627
             ++     + K++GFSD+QIA ATK+TE EVR  R SL +IP YK VDTCAAEFE++TPY
Sbjct: 482  EISAAKMRDAKQKGFSDRQIAHATKTTEDEVRAYRKSLNIIPVYKLVDTCAAEFESSTPY 541

Query: 628  MYSSY-DFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSN 686
             YS+Y + E E AP+ KKKV+ILGGGPNRIGQGIEFDYCCCH +FSL  AGYETIM+NSN
Sbjct: 542  YYSTYEEGESEIAPSDKKKVMILGGGPNRIGQGIEFDYCCCHAAFSLSDAGYETIMVNSN 601

Query: 687  PETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHR 746
            PETVSTDYDTSDRLYFEPLT EDVLN+I+ E+P GIIVQFGGQTPLKL+LP+ +YL    
Sbjct: 602  PETVSTDYDTSDRLYFEPLTKEDVLNIIEAEKPVGIIVQFGGQTPLKLALPLQKYL---- 657

Query: 747  LPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEIG 806
                +     +IWGTSPDSID AEDRERF  I++EL I QP  G+A+S  ++L+I ++IG
Sbjct: 658  ----ANSSHTKIWGTSPDSIDTAEDRERFEKILRELDILQPPNGLARSYEESLSITQQIG 713

Query: 807  YPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALAD 866
            YPVVVRPSYVLGGRAMEIVY+D+ L  Y+  AV+V+P+ P+LIDK+L +AIE+DVDAL D
Sbjct: 714  YPVVVRPSYVLGGRAMEIVYSDDDLKRYMTYAVQVEPDHPILIDKFLENAIEVDVDALCD 773

Query: 867  SCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNC 926
            + G VVIGGIMEHIEQAG+HSGDSAC +P +++S + + TI  WT KLA+ LNV GLMN 
Sbjct: 774  ATGGVVIGGIMEHIEQAGIHSGDSACSVPFQSLSPNAIKTIRVWTDKLAQALNVVGLMNI 833

Query: 927  QYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPKH 986
            QYA+     VY+LEANPRASRTVP+VSKA G PLAK A+L+MSG++L  LG T+EV+PKH
Sbjct: 834  QYAVQGE-QVYILEANPRASRTVPYVSKATGVPLAKMASLIMSGRTLESLGITQEVVPKH 892

Query: 987  VSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVFL 1046
            ++VKEAVLPF KF G D LLGPEMRSTGEVMGID  F  AFAKA+IAAG  L L GTVF+
Sbjct: 893  IAVKEAVLPFNKFPGSDTLLGPEMRSTGEVMGIDTDFGKAFAKAEIAAGVDLALEGTVFV 952

Query: 1047 SLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIA-VERVLKMHEGRPHAGDMVA 1105
            S+N   K     + + F+++GFKIV+TSGT   L+  GI  ++ VLK+HEGRPH  D + 
Sbjct: 953  SMNQRDKKLAIPVVQEFIELGFKIVATSGTRKVLQDHGIQDIDLVLKVHEGRPHVIDWIK 1012

Query: 1106 NGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTVTMT 1165
            N QIQ+++ T +G+   Q D   +RR  L YK+PVITT++GA A   AIRSL+S  + + 
Sbjct: 1013 NNQIQLIINTPTGEE-SQTDARLIRRMALDYKLPVITTIAGAKATIAAIRSLRSEPLEVK 1071

Query: 1166 ALQDFF 1171
            ALQD+ 
Sbjct: 1072 ALQDYL 1077


>gi|158338511|ref|YP_001519688.1| carbamoyl phosphate synthase large subunit [Acaryochloris marina
            MBIC11017]
 gi|158308752|gb|ABW30369.1| carbamoyl-phosphate synthase, large subunit [Acaryochloris marina
            MBIC11017]
          Length = 1080

 Score = 1495 bits (3871), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 728/1085 (67%), Positives = 882/1085 (81%), Gaps = 10/1085 (0%)

Query: 86   LGKRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGL 145
            + +R DL KIL++G+GPIVIGQACEFDYSGTQACKAL++EGYEV+LINSNPATIMTDP  
Sbjct: 1    MSRREDLHKILLIGSGPIVIGQACEFDYSGTQACKALRDEGYEVVLINSNPATIMTDPET 60

Query: 146  ADRTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKL 205
            A+R YI P+TPELVE+V+ KERPDALLPTMGGQTALNLAV LA++G L++Y VELIGAKL
Sbjct: 61   AERIYIEPLTPELVEKVIAKERPDALLPTMGGQTALNLAVTLAKTGVLDQYNVELIGAKL 120

Query: 206  DAIKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGG 265
             AI+ AEDR LFK+AM+ IG+   PSG+  T+ E   IA EIG +PLI+RPAFTLGGTGG
Sbjct: 121  PAIEMAEDRKLFKEAMERIGLGVCPSGLAETMAESQQIAQEIGTYPLIVRPAFTLGGTGG 180

Query: 266  GIAYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDP 325
            GIAYN+EEFEAI ++GL AS  SQ+L+EKSL+GWKEYELEVMRDLADNVVIICSIEN+DP
Sbjct: 181  GIAYNQEEFEAIAQSGLDASPVSQILIEKSLIGWKEYELEVMRDLADNVVIICSIENIDP 240

Query: 326  MGVHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIE 385
            MGVHTGDSITVAPAQTLTDKEYQRLRD SI IIREIGVE GGSN+QFAVNP+DGEV+VIE
Sbjct: 241  MGVHTGDSITVAPAQTLTDKEYQRLRDASIKIIREIGVETGGSNIQFAVNPIDGEVIVIE 300

Query: 386  MNPRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIP 445
            MNPRVSRSSALASKATGFPIAK AAKL+VGY+L +IPNDIT+KTPASFEPSIDYVVTKIP
Sbjct: 301  MNPRVSRSSALASKATGFPIAKFAAKLAVGYALSEIPNDITRKTPASFEPSIDYVVTKIP 360

Query: 446  RFAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWD 505
            RFAFEKFPGSEP LTTQMKSVGEAMA+GRTFQESFQKALRSLE G  GWGC   + L   
Sbjct: 361  RFAFEKFPGSEPALTTQMKSVGEAMAIGRTFQESFQKALRSLETGRFGWGCDQAENLP-S 419

Query: 506  WEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQS 565
             EQ++ SLR PNP+R+  +  A++ G+ V+EI++++ ID WFL  F++L+  E++L   +
Sbjct: 420  LEQIRASLRNPNPERIYTVRHALQAGLSVEEIYDITGIDPWFLWHFQDLLTTEEYLKQTN 479

Query: 566  VSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANT 625
            + ++T D  +++K++GFSD QIAFAT+S E EVR  R  LGV+P+YK VDTCAAEFEA T
Sbjct: 480  LYDLTADLMWQIKQQGFSDPQIAFATQSNEDEVRNYRKQLGVVPAYKTVDTCAAEFEALT 539

Query: 626  PYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNS 685
            PY YS+Y+ E E  P+ ++KV+ILG GPNRIGQGIEFDYCCCH S++LQ+  +ETIM+NS
Sbjct: 540  PYYYSTYEQESEVLPSDRRKVMILGSGPNRIGQGIEFDYCCCHASYALQADDFETIMVNS 599

Query: 686  NPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEH 745
            NPETVSTDYDTSDRLYFEPLT EDVLN+++ E PEGII+QFGGQTPLKL++P+  YL   
Sbjct: 600  NPETVSTDYDTSDRLYFEPLTKEDVLNILEAENPEGIIIQFGGQTPLKLAVPLQTYL--- 656

Query: 746  RLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEI 805
                   DG  +IWGTSPDSID AEDRERF  I+  L+I QP  GIA+S  +A  +A+ I
Sbjct: 657  ---QGKPDG-PKIWGTSPDSIDIAEDRERFEQILHTLNITQPPNGIARSNQEATEVAQRI 712

Query: 806  GYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALA 865
             YPVVVRPSYVLGGRAMEIVY+DE L  Y+  AV+V+P+ P+LIDK+L DAIE+DVDA+A
Sbjct: 713  QYPVVVRPSYVLGGRAMEIVYSDEELERYMTFAVQVEPDHPILIDKFLEDAIEVDVDAIA 772

Query: 866  DSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMN 925
            D  G VVIGGIMEHIEQAGVHSGDSAC IPT ++    L TI  W+ +LA++LNV GLMN
Sbjct: 773  DRTGEVVIGGIMEHIEQAGVHSGDSACAIPTLSLGEETLATIREWSKQLAQQLNVIGLMN 832

Query: 926  CQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPK 985
             Q+A+     VY+LEANPRASRTVPFVSKAIG PLA+ AA +MSG++L DLG  +E IP+
Sbjct: 833  LQFAVQGE-QVYILEANPRASRTVPFVSKAIGLPLAQVAARLMSGQTLADLGIKEERIPQ 891

Query: 986  HVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVF 1045
            H+SVKEAVLPF KF G D +LGPEMRSTGE MGID  F  AFAK+Q +A Q LP SG+VF
Sbjct: 892  HISVKEAVLPFAKFPGTDTILGPEMRSTGEAMGIDTDFGKAFAKSQFSAHQDLPQSGSVF 951

Query: 1046 LSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVA 1105
            +S+ D  K  +  IA+  +++GFK+V+T+GT   LE +G  V  VLK+HEGRP+  D++ 
Sbjct: 952  VSMTDRDKQAVIPIARDLIELGFKLVATAGTQKVLEAEGFEVAPVLKLHEGRPNVLDLIK 1011

Query: 1106 NGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTVTMT 1165
            N Q+Q+++ T SG S    DG  +RR  LAYK+P+ITT++GA A A A+RSL+S T+ + 
Sbjct: 1012 NRQVQLILNTPSG-SDAHADGRLIRRSALAYKIPLITTIAGAKATAAALRSLQSETMDVK 1070

Query: 1166 ALQDF 1170
            A+QD+
Sbjct: 1071 AIQDY 1075


>gi|412993987|emb|CCO14498.1| carbamoyl-phosphate synthase, large subunit [Bathycoccus prasinos]
          Length = 1219

 Score = 1495 bits (3871), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 727/1068 (68%), Positives = 860/1068 (80%), Gaps = 3/1068 (0%)

Query: 107  QACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLADRTYITPMTPELVEQVLEKE 166
             ACEFDYSGTQACKAL+ EGY+VILINSNPATIMTDP  A RT+ITPMTPE VE+++  E
Sbjct: 152  HACEFDYSGTQACKALRAEGYDVILINSNPATIMTDPETAARTFITPMTPEYVEKIIAAE 211

Query: 167  RPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDAIKKAEDRDLFKQAMKTIGV 226
            +PDA+LPTMGGQTALNL  ALAE+G  EKYGVELIGAKL AI KAEDR LFK AM  IG+
Sbjct: 212  KPDAVLPTMGGQTALNLTKALAEAGIFEKYGVELIGAKLPAINKAEDRQLFKDAMTKIGL 271

Query: 227  KTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGIAYNKEEFEAICKAGLAASL 286
            KTP SG   T ++   IA EIG  PLIIRPAFTLGG+GGGIAYN +EFE I K GL AS 
Sbjct: 272  KTPQSGTAETWEQAKEIAAEIGTLPLIIRPAFTLGGSGGGIAYNMKEFEQITKGGLDASA 331

Query: 287  TSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMGVHTGDSITVAPAQTLTDKE 346
            TSQVL+E+SLLGWKEYELEVMRDLADNVVI+CSIEN DPMGVHTGDSIT+APAQTLTDKE
Sbjct: 332  TSQVLIEQSLLGWKEYELEVMRDLADNVVIVCSIENFDPMGVHTGDSITIAPAQTLTDKE 391

Query: 347  YQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMNPRVSRSSALASKATGFPIA 406
            YQRLRD S+AIIREIGVECGGSNVQ AVNP DGE+M+IEMNPRVSRSSALASKATGFPIA
Sbjct: 392  YQRLRDASLAIIREIGVECGGSNVQMAVNPADGELMIIEMNPRVSRSSALASKATGFPIA 451

Query: 407  KMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRFAFEKFPGSEPLLTTQMKSV 466
            KMAAK+++G ++D IPNDIT KTPA+FEPSIDYVVTKIPRFAFEKFPG+EP+LTTQMKSV
Sbjct: 452  KMAAKMALGATMDGIPNDITMKTPAAFEPSIDYVVTKIPRFAFEKFPGAEPILTTQMKSV 511

Query: 467  GEAMALGRTFQESFQKALRSLECGFSGWGCS-NVKELDWDWEQLKYSLRVPNPDRMQAIY 525
            GEAMA+GRT+QESF KALRSLE G SGWG + N   +  D E +K  L VP+P+R+ A++
Sbjct: 512  GEAMAMGRTWQESFNKALRSLETGLSGWGLNKNDGFMQNDPELIKERLVVPSPERVVALH 571

Query: 526  AAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLT-QSVSNMTKDDFYEVKRRGFSD 584
             A   GM  DEI  L+ +D WF+ Q  +L   E +L +  S+ +++ +D+ +VKRRG+SD
Sbjct: 572  EAFMSGMSEDEIIRLTTMDPWFIRQLGDLYQTECWLKSLSSMDDLSVEDWTQVKRRGYSD 631

Query: 585  KQIAFATKST-EKEVREKRLSLGVIPSYKRVDTCAAEFEANTPYMYSSYDFECESAPTQK 643
             QI  A   T E +VR+KR S+GV+ + KRVDTCAAEFE++TPYMYSSYD  CE+ PT  
Sbjct: 632  AQICRAFPGTVEADVRQKRKSMGVVAAMKRVDTCAAEFESDTPYMYSSYDGSCEAKPTNG 691

Query: 644  KKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSNPETVSTDYDTSDRLYFE 703
            +K+LILGGGPNRIGQGIEFDYCCCH +F+L  AGYETIM+NSNPETVSTDYDTSDRLYFE
Sbjct: 692  RKILILGGGPNRIGQGIEFDYCCCHAAFALSDAGYETIMLNSNPETVSTDYDTSDRLYFE 751

Query: 704  PLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHRLPSASGDGLVRIWGTSP 763
            PLTVEDVLNV ++ERPEGIIVQFGGQTPL L+  +   L  + + +ASG+G+  I GT P
Sbjct: 752  PLTVEDVLNVCEVERPEGIIVQFGGQTPLSLATKLEAALKANPIQAASGNGVTHILGTPP 811

Query: 764  DSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEIGYPVVVRPSYVLGGRAME 823
            DSIDAAEDR+R+  I+KEL I QP GG+   E +AL+ A+ +GYPV+VRPSYVLGGRAME
Sbjct: 812  DSIDAAEDRDRWMDILKELDIRQPAGGVCVDEGEALSTAERVGYPVMVRPSYVLGGRAME 871

Query: 824  IVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALADSCGNVVIGGIMEHIEQA 883
            +V T   L  YL  AVEVDPERPVL+DKYL  A E+DVDAL DS GNVVIGGIMEHIEQA
Sbjct: 872  VVSTPSQLKRYLSTAVEVDPERPVLVDKYLDQATELDVDALCDSFGNVVIGGIMEHIEQA 931

Query: 884  GVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNCQYAITTSGDVYLLEANP 943
            GVHSGDSAC +PT+T+  S L TI  WT KLA+RL V GL+N QYA+   G  Y++EANP
Sbjct: 932  GVHSGDSACSLPTQTVPESALATIREWTPKLARRLGVVGLLNMQYAVMPDGTPYIIEANP 991

Query: 944  RASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPKHVSVKEAVLPFEKFQGCD 1003
            RASRTVPFVSKAIGHPLAKYA+LVM+G+SL ++GF +E I KH+SVKEAVLPF+KF GCD
Sbjct: 992  RASRTVPFVSKAIGHPLAKYASLVMAGQSLEEIGFMQEPITKHISVKEAVLPFDKFLGCD 1051

Query: 1004 VLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVFLSLNDLTKPHLERIAKAF 1063
             LLGPEMRSTGEVMGID  F  A+ KAQIAAGQKLP SG VF+S+ +  K  +  +AK  
Sbjct: 1052 TLLGPEMRSTGEVMGIDFDFERAYCKAQIAAGQKLPKSGKVFISVKNSDKEAMVPVAKNL 1111

Query: 1064 LDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVANGQIQMMVITSSGDSLDQ 1123
            +D+GF+I+ST GTA  LE  GI V +V K+HEGRP+ GD++ +G +++M +TSSGD+ D 
Sbjct: 1112 VDMGFEILSTGGTATTLESAGIKVTKVKKIHEGRPNIGDILRDGDLKLMFVTSSGDANDL 1171

Query: 1124 IDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTVTMTALQDFF 1171
             DG +LRR  +  KVP+ TTV+G  A A +++ L+   + M ALQDFF
Sbjct: 1172 TDGRELRRTAVGLKVPICTTVAGIKATAGSLKILQEGNLQMQALQDFF 1219



 Score =  231 bits (589), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 146/405 (36%), Positives = 216/405 (53%), Gaps = 22/405 (5%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            K T+ RKILILG GP  IGQ  EFDY    A  AL + GYE I++NSNP T+ TD   +D
Sbjct: 687  KPTNGRKILILGGGPNRIGQGIEFDYCCCHAAFALSDAGYETIMLNSNPETVSTDYDTSD 746

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAES------GALEKYGV-EL 200
            R Y  P+T E V  V E ERP+ ++   GGQT L+LA  L  +       A    GV  +
Sbjct: 747  RLYFEPLTVEDVLNVCEVERPEGIIVQFGGQTPLSLATKLEAALKANPIQAASGNGVTHI 806

Query: 201  IGAKLDAIKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTL 260
            +G   D+I  AEDRD +   +K + ++ P  G+     E +S A  +G +P+++RP++ L
Sbjct: 807  LGTPPDSIDAAEDRDRWMDILKELDIRQPAGGVCVDEGEALSTAERVG-YPVMVRPSYVL 865

Query: 261  GGTGGGIAYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSI 320
            GG    +     + +      +       VLV+K L    E +++ + D   NVVI   +
Sbjct: 866  GGRAMEVVSTPSQLKRYLSTAVEVDPERPVLVDKYLDQATELDVDALCDSFGNVVIGGIM 925

Query: 321  ENVDPMGVHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGE 380
            E+++  GVH+GDS    P QT+ +     +R+++  + R +GV  G  N+Q+AV P DG 
Sbjct: 926  EHIEQAGVHSGDSACSLPTQTVPESALATIREWTPKLARRLGV-VGLLNMQYAVMP-DGT 983

Query: 381  VMVIEMNPRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASF--EPSID 438
              +IE NPR SR+    SKA G P+AK A+ +  G SL++I           F  EP   
Sbjct: 984  PYIIEANPRASRTVPFVSKAIGHPLAKYASLVMAGQSLEEI----------GFMQEPITK 1033

Query: 439  YVVTKIPRFAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKA 483
            ++  K     F+KF G + LL  +M+S GE M +   F+ ++ KA
Sbjct: 1034 HISVKEAVLPFDKFLGCDTLLGPEMRSTGEVMGIDFDFERAYCKA 1078


>gi|56750828|ref|YP_171529.1| carbamoyl phosphate synthase large subunit [Synechococcus elongatus
            PCC 6301]
 gi|81299522|ref|YP_399730.1| carbamoyl phosphate synthase large subunit [Synechococcus elongatus
            PCC 7942]
 gi|56685787|dbj|BAD79009.1| carbamoyl-phosphate synthase pyrimidine-specific large chain
            [Synechococcus elongatus PCC 6301]
 gi|81168403|gb|ABB56743.1| carbamoyl-phosphate synthase large subunit [Synechococcus elongatus
            PCC 7942]
          Length = 1097

 Score = 1495 bits (3871), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 723/1098 (65%), Positives = 885/1098 (80%), Gaps = 22/1098 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            +R D+RKIL+LG+GPIVIGQACEFDYSGTQACKAL+EEGYEV+L+NSNPATIMTDP  AD
Sbjct: 3    RRQDIRKILLLGSGPIVIGQACEFDYSGTQACKALREEGYEVVLVNSNPATIMTDPETAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
            RTYI P+TPELV QV+E+ERPDALLPTMGGQTALNLAVALA++G L+++GVELIGAKL+A
Sbjct: 63   RTYIEPLTPELVAQVIERERPDALLPTMGGQTALNLAVALAKNGTLDRFGVELIGAKLEA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I+KAEDR LFK+AM+ IGVK  PSGI N + E  +IA +IG +PLIIRPAFT+GGTGGGI
Sbjct: 123  IEKAEDRLLFKEAMERIGVKVCPSGIANNMAEAQAIAEQIGTYPLIIRPAFTMGGTGGGI 182

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEFE I ++GL AS  SQ+LVE+SL+GWKE+ELEVMRDLADNVVIICSIEN+DPMG
Sbjct: 183  AYNQEEFELIVQSGLDASPVSQILVEQSLIGWKEFELEVMRDLADNVVIICSIENLDPMG 242

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQRLRD +IAIIREIGVE GGSN+QFA+NP DG+V+VIEMN
Sbjct: 243  VHTGDSITVAPAQTLTDKEYQRLRDQAIAIIREIGVETGGSNIQFAINPQDGDVIVIEMN 302

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRF 447
            PRVSRSSALASKATGFPIAK+AAKL+VGYSLD++ NDIT++TPASFEP+IDYVVTKIPRF
Sbjct: 303  PRVSRSSALASKATGFPIAKIAAKLAVGYSLDELKNDITRQTPASFEPTIDYVVTKIPRF 362

Query: 448  AFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDWE 507
            AFEKFPG+   LTT MKSVGEAMA+GRTF ESFQKALRSLE G SGWGC   + L    E
Sbjct: 363  AFEKFPGTPAQLTTMMKSVGEAMAIGRTFPESFQKALRSLEIGRSGWGCDRPETLP-TLE 421

Query: 508  QLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSVS 567
            Q+K  LR P+PDR+ A+  AM  G+   +I++L+ ID WFL +F+E+++ E FL   S+ 
Sbjct: 422  QIKPQLRTPSPDRIFAVRQAMLLGLSDGDIYQLTGIDPWFLEKFREILEGEDFLKRASIE 481

Query: 568  NMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTPY 627
             +T   + EVK+ GFSD+QIAFA  S+E+ VR++R   G+ P YK VDTCAAEFEA TPY
Sbjct: 482  QITPAQWLEVKQLGFSDRQIAFALGSSEEAVRQRRQQQGIKPVYKLVDTCAAEFEAYTPY 541

Query: 628  MYSSYD---------------FECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFS 672
             YS Y+                E E  P+ + KV+ILGGGPNRIGQGIEFDYCCCH +F+
Sbjct: 542  YYSCYESPRSHLAESGLTTIPAESEVRPSDRPKVMILGGGPNRIGQGIEFDYCCCHAAFA 601

Query: 673  LQSAGYETIMMNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPL 732
            L + GYETIM+NSNPETVSTDYDTSDRLYFEPLT EDVLN+++ ERP+G+I+QFGGQTPL
Sbjct: 602  LAADGYETIMVNSNPETVSTDYDTSDRLYFEPLTREDVLNILEAERPQGVIIQFGGQTPL 661

Query: 733  KLSLPIHQYLDEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIA 792
            KL++P+  +L   + P     G  +IWGTSPDSID AEDRERF  I+++L I QP  G+A
Sbjct: 662  KLAVPLQTFL---QTPEGQALG-TQIWGTSPDSIDTAEDRERFEQILRQLDIAQPANGLA 717

Query: 793  KSEADALAIAKEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKY 852
            +S  +ALAIA  IGYP VVRPSYVLGGRAMEIVY+D  L  Y+  AV+V+P+ P+LIDK+
Sbjct: 718  RSPEEALAIAHRIGYPTVVRPSYVLGGRAMEIVYSDAELERYMTEAVQVEPDHPILIDKF 777

Query: 853  LSDAIEIDVDALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTI 912
            L +AIE+DVDALAD  G VVIGGIMEHIEQAG+HSGDSAC +PT +++ + L+TI +WT 
Sbjct: 778  LENAIEVDVDALADRTGQVVIGGIMEHIEQAGIHSGDSACSLPTVSLNETVLETIRAWTT 837

Query: 913  KLAKRLNVCGLMNCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKS 972
            +LAK LNV GLMN Q+A+     VY+LEANPRASRTVPFVSKAIG PLAK AA +MSG++
Sbjct: 838  QLAKALNVIGLMNIQFAVKDE-QVYILEANPRASRTVPFVSKAIGRPLAKIAARLMSGQT 896

Query: 973  LNDLGFTKEVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQI 1032
            L DLG T E++P ++SVKEAVLPF++F G D LLGPEMRSTGEVMGID+ F  AFAKA++
Sbjct: 897  LADLGITSELVPSYLSVKEAVLPFDRFPGTDTLLGPEMRSTGEVMGIDVDFGRAFAKAEL 956

Query: 1033 AAGQKLPLSGTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLK 1092
            AA Q+LP  GTVF+S++D  K  +  IA+ FL +GF++V+T GT   L  + ++VE +LK
Sbjct: 957  AASQRLPRQGTVFISVSDRDKAAIGPIAREFLQLGFRVVATGGTQKVLAEQRLSVEPILK 1016

Query: 1093 MHEGRPHAGDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAE 1152
            +HEGRPH  D + N QIQ+++ T +G +  ++D   +RR  L YKVP +TT++GA A  E
Sbjct: 1017 VHEGRPHVLDALKNDQIQLIINTPAG-ARAKVDDQIIRRAALDYKVPTVTTIAGAKATVE 1075

Query: 1153 AIRSLKSNTVTMTALQDF 1170
            AIR+L    + + +LQD+
Sbjct: 1076 AIRALLEQPLQVKSLQDY 1093


>gi|440752783|ref|ZP_20931986.1| carbamoyl-phosphate synthase, large subunit [Microcystis aeruginosa
            TAIHU98]
 gi|440177276|gb|ELP56549.1| carbamoyl-phosphate synthase, large subunit [Microcystis aeruginosa
            TAIHU98]
          Length = 1069

 Score = 1494 bits (3867), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 723/1076 (67%), Positives = 878/1076 (81%), Gaps = 10/1076 (0%)

Query: 98   LGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLADRTYITPMTPE 157
            +GAGPIVIGQACEFDYSGTQACKAL+EEGYEVIL+NSNPA+IMTDP +ADRTYI P+ PE
Sbjct: 1    MGAGPIVIGQACEFDYSGTQACKALREEGYEVILVNSNPASIMTDPEMADRTYIEPILPE 60

Query: 158  LVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDAIKKAEDRDLF 217
            +VE+++ KERPDA+LPTMGGQTALN AVALA+SG LEKY VELIGAKL AI+KAEDR+LF
Sbjct: 61   IVEKIIAKERPDAILPTMGGQTALNTAVALAKSGVLEKYNVELIGAKLPAIEKAEDRELF 120

Query: 218  KQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGIAYNKEEFEAI 277
            K+AM+ IGV   PSGI N L+E  +I ++IG +PLIIRPAFTLGGTGGGIAYN+EEFE +
Sbjct: 121  KKAMEKIGVPVCPSGIANNLEEAKAIGHQIGSYPLIIRPAFTLGGTGGGIAYNQEEFEPM 180

Query: 278  CKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMGVHTGDSITVA 337
             + GL  S TSQ+LVEKSL+GWKEYELEVMRDLADNVVIICSIEN D MGVHTGDSITVA
Sbjct: 181  AQYGLDCSPTSQILVEKSLIGWKEYELEVMRDLADNVVIICSIENFDAMGVHTGDSITVA 240

Query: 338  PAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMNPRVSRSSALA 397
            PAQTLTDKEYQRLRDYS AIIREIGVE GGSN+QF+VNP +G+V+VIEMNPRVSRSSALA
Sbjct: 241  PAQTLTDKEYQRLRDYSKAIIREIGVETGGSNIQFSVNPTNGDVIVIEMNPRVSRSSALA 300

Query: 398  SKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRFAFEKFPGSEP 457
            SKATGFPIAK AAKL+VGY+LD+IPNDITKKTPASFEP+IDYVVTKIPRFAFEKFPGS+P
Sbjct: 301  SKATGFPIAKFAAKLAVGYTLDEIPNDITKKTPASFEPTIDYVVTKIPRFAFEKFPGSQP 360

Query: 458  LLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDWEQLKYSLRVPN 517
            +LTTQMKSVGEAMA+GRTFQESFQKALRSLE G  G+GC  V+ L     +++  LR PN
Sbjct: 361  ILTTQMKSVGEAMAIGRTFQESFQKALRSLETGRFGFGCDKVETLP-PLSEVRAGLRTPN 419

Query: 518  PDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSVSNMTKDDFYEV 577
            P+R+ +IY A K GM  +EIHEL+ ID WFL +  +L++ E+FL    + ++++++ + +
Sbjct: 420  PERVYSIYHAFKLGMNGEEIHELTGIDPWFLDKLADLMETEKFLKRTPLKSLSQENLFAI 479

Query: 578  KRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTPYMYSSYD-FEC 636
            K++GFSD+QIAFAT ++E EVR  R  LG++P YK VDTCAAEFEA TPY YS+Y+  E 
Sbjct: 480  KQQGFSDRQIAFATNTSEDEVRSYRKGLGIVPVYKMVDTCAAEFEALTPYYYSTYERVES 539

Query: 637  ESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSNPETVSTDYDT 696
            E  P+ K+KV+ILGGGPNRIGQGIEFDYCCCH +FSL  AG+ETIM+NSNPETVSTDYDT
Sbjct: 540  EVLPSDKRKVMILGGGPNRIGQGIEFDYCCCHAAFSLSQAGFETIMVNSNPETVSTDYDT 599

Query: 697  SDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHRLPSASGDGLV 756
            SDRLYFEPLT EDVLN+I+ E+PEG+I+QFGGQTPLKL++P+ +YL+    P  +     
Sbjct: 600  SDRLYFEPLTKEDVLNIIEAEQPEGLIIQFGGQTPLKLAVPLQKYLESPNCPVNT----- 654

Query: 757  RIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEIGYPVVVRPSYV 816
            +IWGTSPDSIDAAEDRERF  I+++L I QP  GIA++  ++ A+A+ IGYPVVVRPSYV
Sbjct: 655  KIWGTSPDSIDAAEDRERFEQILRQLDIRQPLNGIARNFQESQAVAQRIGYPVVVRPSYV 714

Query: 817  LGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALADSCGNVVIGGI 876
            LGGRAMEIVY+D  L  Y++ AV+++P+ P+LIDK+L +AIE+DVDAL+D+ G VVIGG+
Sbjct: 715  LGGRAMEIVYSDSELERYMKYAVQIEPDHPILIDKFLENAIEVDVDALSDATGTVVIGGL 774

Query: 877  MEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNCQYAITTSGDV 936
            MEHIEQAGVHSGDSAC IP  ++S+S L TI  WT++LAK L V GLMN QYA+     V
Sbjct: 775  MEHIEQAGVHSGDSACSIPHTSLSASVLTTIRQWTVELAKALKVIGLMNIQYAVQGE-TV 833

Query: 937  YLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPKHVSVKEAVLPF 996
            Y+LEANPRASRTVP+VSKA G PLAK A+LVMSGK+L +LG   E IP+H++VKEAVLPF
Sbjct: 834  YILEANPRASRTVPYVSKATGVPLAKVASLVMSGKTLTELGIISEAIPRHIAVKEAVLPF 893

Query: 997  EKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVFLSLNDLTKPHL 1056
            +KF G D LLGPEMRSTGEVMGID  F  AFAKA++AAG  L  SGTVF+S++D  K  +
Sbjct: 894  QKFPGADTLLGPEMRSTGEVMGIDSDFGKAFAKAEMAAGVILATSGTVFVSMSDRDKTPM 953

Query: 1057 ERIAKAFLDIGFKIVSTSGTAHFLELKGIA-VERVLKMHEGRPHAGDMVANGQIQMMVIT 1115
              + K    +GF++V+TSGT   L   G   ++ VLK+HEGRP   D + N  IQ +V T
Sbjct: 954  VPVVKDLQSLGFRVVATSGTRKVLLENGCENIDLVLKIHEGRPDVVDWIKNDWIQFIVNT 1013

Query: 1116 SSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTVTMTALQDFF 1171
             SG+   Q DG K+RR  L YK+P+ITT++GA A   A++SL+S  + + ALQD+ 
Sbjct: 1014 PSGEE-SQNDGRKIRRTALDYKLPIITTIAGAKATVAALKSLQSQPLEVKALQDYL 1068



 Score =  234 bits (596), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 139/403 (34%), Positives = 222/403 (55%), Gaps = 28/403 (6%)

Query: 90  TDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLADRT 149
           +D RK++ILG GP  IGQ  EFDY    A  +L + G+E I++NSNP T+ TD   +DR 
Sbjct: 544 SDKRKVMILGGGPNRIGQGIEFDYCCCHAAFSLSQAGFETIMVNSNPETVSTDYDTSDRL 603

Query: 150 YITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKY--------GVELI 201
           Y  P+T E V  ++E E+P+ L+   GGQT L LAV       L+KY          ++ 
Sbjct: 604 YFEPLTKEDVLNIIEAEQPEGLIIQFGGQTPLKLAV------PLQKYLESPNCPVNTKIW 657

Query: 202 GAKLDAIKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLG 261
           G   D+I  AEDR+ F+Q ++ + ++ P +GI     E  ++A  IG +P+++RP++ LG
Sbjct: 658 GTSPDSIDAAEDRERFEQILRQLDIRQPLNGIARNFQESQAVAQRIG-YPVVVRPSYVLG 716

Query: 262 GTGGGIAYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIE 321
           G    I Y+  E E   K  +       +L++K L    E +++ + D    VVI   +E
Sbjct: 717 GRAMEIVYSDSELERYMKYAVQIEPDHPILIDKFLENAIEVDVDALSDATGTVVIGGLME 776

Query: 322 NVDPMGVHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGE- 380
           +++  GVH+GDS    P  +L+      +R +++ + + + V  G  N+Q+AV    GE 
Sbjct: 777 HIEQAGVHSGDSACSIPHTSLSASVLTTIRQWTVELAKALKV-IGLMNIQYAVQ---GET 832

Query: 381 VMVIEMNPRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYV 440
           V ++E NPR SR+    SKATG P+AK+A+ +  G +L ++   I++  P        ++
Sbjct: 833 VYILEANPRASRTVPYVSKATGVPLAKVASLVMSGKTLTEL-GIISEAIPR-------HI 884

Query: 441 VTKIPRFAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKA 483
             K     F+KFPG++ LL  +M+S GE M +   F ++F KA
Sbjct: 885 AVKEAVLPFQKFPGADTLLGPEMRSTGEVMGIDSDFGKAFAKA 927


>gi|113476462|ref|YP_722523.1| carbamoyl phosphate synthase large subunit [Trichodesmium erythraeum
            IMS101]
 gi|110167510|gb|ABG52050.1| carbamoyl-phosphate synthase large subunit [Trichodesmium erythraeum
            IMS101]
          Length = 1076

 Score = 1493 bits (3866), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 723/1084 (66%), Positives = 897/1084 (82%), Gaps = 10/1084 (0%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            +R D+RKIL++G+GPIVIGQACEFDYSGTQACKAL+EEG+EV+L+NSNPATIMTDP +A+
Sbjct: 3    RRQDIRKILLVGSGPIVIGQACEFDYSGTQACKALREEGFEVVLVNSNPATIMTDPEIAE 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+TPEL+E+V+ KERPDALLPTMGGQTALN+AV+LA++G L KYGV+LIGAKL A
Sbjct: 63   CTYIEPLTPELIEKVIAKERPDALLPTMGGQTALNIAVSLAKNGTLAKYGVDLIGAKLPA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I+ AEDR LFK+AM  IG++  PSGI +  +E  +IA +IG +PLIIRPAFTLGGTGGGI
Sbjct: 123  IEMAEDRQLFKEAMGRIGIQVCPSGIASNWEEAKAIAQKIGTYPLIIRPAFTLGGTGGGI 182

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EE+E + + G+ AS  SQ+LVEKSL+GWKEYELEVMRDLADNVVIICSIEN+DPMG
Sbjct: 183  AYNQEEYEVMAQGGIDASPVSQILVEKSLIGWKEYELEVMRDLADNVVIICSIENIDPMG 242

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            +HTGDS+TVAPAQTLTDKEYQRLRD SI IIREIGVE GGSN+QFAV+P++G+V+VIEMN
Sbjct: 243  IHTGDSVTVAPAQTLTDKEYQRLRDASIKIIREIGVETGGSNIQFAVHPLNGDVIVIEMN 302

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRF 447
            PRVSRSSALASKATGFPIAKMAAKL+VGY+LD+IPNDITKKTPASFEP+IDYVVTKIPRF
Sbjct: 303  PRVSRSSALASKATGFPIAKMAAKLAVGYTLDEIPNDITKKTPASFEPTIDYVVTKIPRF 362

Query: 448  AFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDWE 507
            AFEKFPGS+P+LTTQMKSVGEAMA+GRTFQESFQKALRSLE G +G+G    +++    E
Sbjct: 363  AFEKFPGSQPVLTTQMKSVGEAMAIGRTFQESFQKALRSLETGRAGFGADRWEKIP-SLE 421

Query: 508  QLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSVS 567
            Q++  LR PNP+R+  +  A+  GM ++EI+EL+ ID WFL + +ELI+ E+ +    ++
Sbjct: 422  QVRSGLRTPNPERLFTVRHALLLGMSLEEIYELTGIDIWFLDKMRELINTEKLIKYTPLN 481

Query: 568  NMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTPY 627
             +TK+  +++KR+GFSD+QIA+ +K+TE EVR  RLSLG+ P YK VDTCAAEFEA TPY
Sbjct: 482  ELTKEQLWDIKRQGFSDRQIAYCSKTTEDEVRSYRLSLGIKPVYKTVDTCAAEFEALTPY 541

Query: 628  MYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSNP 687
             YS+Y+ E E  P++K+KV+ILGGGPNRIGQGIEFDYCCCH S++L + G+ETIM+NSNP
Sbjct: 542  YYSTYEEESEILPSEKRKVMILGGGPNRIGQGIEFDYCCCHASYALGADGFETIMVNSNP 601

Query: 688  ETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHRL 747
            ETVSTDYDTSDRLYFEPLT EDVLN+I+ E P GIIVQFGGQTPLKL++P+ +YL++   
Sbjct: 602  ETVSTDYDTSDRLYFEPLTKEDVLNIIEAENPVGIIVQFGGQTPLKLAVPLQKYLEQV-- 659

Query: 748  PSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEIGY 807
                 D   +IWGTSPDSID AEDRERF  I+++L I Q   G+A+S  DAL +A  IGY
Sbjct: 660  -----DAQTKIWGTSPDSIDTAEDRERFEKILRDLDIRQAANGLARSFEDALTVAHTIGY 714

Query: 808  PVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALADS 867
            PVVVRPSYVLGGRAMEIVY+D+ L  Y++ AV+V+PE P+LIDK+L++A+E+DVDA+ADS
Sbjct: 715  PVVVRPSYVLGGRAMEIVYSDQELERYMKFAVQVEPEHPILIDKFLNNAVEVDVDAIADS 774

Query: 868  CGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNCQ 927
             G VVIGGIMEHIE+AG+HSGDSAC IP +T++S+ ++TI  WT+ LAK LNV GLMN Q
Sbjct: 775  TGRVVIGGIMEHIEEAGIHSGDSACSIPYQTLTSAAVETIRQWTVALAKALNVIGLMNIQ 834

Query: 928  YAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPKHV 987
            +A+     VY+LEANPRASRTVPFVSKAIG PLAK A+ VMSGK+L +LGF  E IP HV
Sbjct: 835  FAVQGE-TVYILEANPRASRTVPFVSKAIGIPLAKIASRVMSGKNLEELGFIDEQIPDHV 893

Query: 988  SVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVFLS 1047
            SVKEAVLPF KF G D +LGPEMRSTGE MGID+ F  AFAKAQ++AGQKLPL GTVF+S
Sbjct: 894  SVKEAVLPFAKFPGIDTVLGPEMRSTGEAMGIDVDFGKAFAKAQLSAGQKLPLEGTVFVS 953

Query: 1048 LNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVANG 1107
            ++D  K  +  + K  +D+G K+V+T GT   L L  + V  +LK+HEGRP+  D + NG
Sbjct: 954  MSDRYKEAVVPVVKDLVDLGLKVVATEGTRKILRLHDLEVGLMLKLHEGRPNVLDGIKNG 1013

Query: 1108 QIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTVTMTAL 1167
            +IQ+++I  SGD   + DG+K+RR  L YK+ +ITT++GA A A AIR+LKS  + + A+
Sbjct: 1014 EIQLIIIIPSGDEA-RADGIKIRRSALDYKITLITTIAGAKATAAAIRALKSGALEVKAI 1072

Query: 1168 QDFF 1171
            QD++
Sbjct: 1073 QDYY 1076


>gi|428301226|ref|YP_007139532.1| carbamoyl-phosphate synthase large subunit [Calothrix sp. PCC 6303]
 gi|428237770|gb|AFZ03560.1| carbamoyl-phosphate synthase large subunit [Calothrix sp. PCC 6303]
          Length = 1083

 Score = 1493 bits (3865), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 728/1088 (66%), Positives = 881/1088 (80%), Gaps = 13/1088 (1%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            +R D++KIL+LG+GPIVIGQACEFDYSGTQACKAL+EEGYEV+L+NSNPATIMTDP  AD
Sbjct: 3    RREDIKKILLLGSGPIVIGQACEFDYSGTQACKALREEGYEVVLVNSNPATIMTDPETAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
            RTYI P+TPE+VE+V+ +ERPD +LPTMGGQTALN+AVALA++G LE+Y VELIGAKL A
Sbjct: 63   RTYIEPLTPEMVEKVIAQERPDVMLPTMGGQTALNIAVALAKNGVLERYNVELIGAKLPA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I+KAEDR LF +AM  IGV   PSG  +TLDE  +IA  IG +PLIIRPAFT+GGTGGGI
Sbjct: 123  IEKAEDRKLFNEAMAKIGVDVCPSGTASTLDEAKAIAQRIGTYPLIIRPAFTMGGTGGGI 182

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            +YN+EEF  + + G+ AS  SQ+L+++SLLGWKEYELEVMRDLADNVVIICSIEN+DPMG
Sbjct: 183  SYNEEEFAEMAQGGIDASPVSQILIDQSLLGWKEYELEVMRDLADNVVIICSIENLDPMG 242

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            +HTGDSITVAPAQTLTDKEYQRLRD +I IIREIGVE GGSN+QFAVNPV+G+V+VIEMN
Sbjct: 243  IHTGDSITVAPAQTLTDKEYQRLRDIAIKIIREIGVETGGSNIQFAVNPVNGDVVVIEMN 302

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRF 447
            PRVSRSSALASKATGFPIAKMAAKL+VGY+LD+I NDITK+TPASFEP+IDYVVTKIPRF
Sbjct: 303  PRVSRSSALASKATGFPIAKMAAKLAVGYTLDEIRNDITKQTPASFEPTIDYVVTKIPRF 362

Query: 448  AFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDWE 507
            AFEKFPGSE +LTTQMKSVGEAMA+GRTF ESFQKA+RSLE G +GWGC   ++L    E
Sbjct: 363  AFEKFPGSEAVLTTQMKSVGEAMAIGRTFNESFQKAIRSLETGRAGWGCDRTEKLP-SGE 421

Query: 508  QLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSVS 567
            Q++  LR PNP+R+ ++  AM+ G+   EI EL+ ID WFL + +E+ID+E+FL    + 
Sbjct: 422  QIRAQLRTPNPERIFSVRHAMQLGITNQEIFELTGIDPWFLDKLQEIIDLEKFLKRTPLQ 481

Query: 568  NMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTPY 627
             +TK+  YEVKR GFSD+QIAFATK+ E +VR  R  LGVIP YK VDTCAAEFEA TPY
Sbjct: 482  QLTKEQMYEVKRFGFSDRQIAFATKTDEDQVRSFRKQLGVIPVYKTVDTCAAEFEAFTPY 541

Query: 628  MYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSNP 687
             YS+Y+ E E  PT K KV+ILGGGPNRIGQGIEFDYCCCH +++L+ AGYETIM+NSNP
Sbjct: 542  HYSTYEEEDEILPTDKPKVMILGGGPNRIGQGIEFDYCCCHAAYALKDAGYETIMVNSNP 601

Query: 688  ETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHRL 747
            ETVSTDYDTSDRLYFEPLT EDVLN+I+ E P G+IVQFGGQTPLKLS+P+   ++   L
Sbjct: 602  ETVSTDYDTSDRLYFEPLTKEDVLNIIEAENPVGVIVQFGGQTPLKLSIPLQNAINNPEL 661

Query: 748  PSASGDGL-VRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEIG 806
                  GL  +IWGTSPDSIDAAE+RERF  I++EL+I QP  GIA++  DAL +A+ IG
Sbjct: 662  ------GLTTKIWGTSPDSIDAAENRERFEQILQELNIAQPPNGIARTYEDALVVARRIG 715

Query: 807  YPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALAD 866
            YPVVVRPSYVLGGRAMEIVY+D  L  Y+  AV V+PE P+LIDK+L +AIE+DVDA+AD
Sbjct: 716  YPVVVRPSYVLGGRAMEIVYSDTELERYMTFAVLVEPEHPILIDKFLENAIEVDVDAIAD 775

Query: 867  SCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNC 926
              G VVIGGIMEHIEQAG+HSGDSAC +P+ +++   L  I +WT +LA+ L V GLMN 
Sbjct: 776  HTGRVVIGGIMEHIEQAGIHSGDSACALPSISLAPGILQQIRTWTAELARSLKVIGLMNI 835

Query: 927  QYAI----TTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEV 982
            Q+A+    T    VY+LEANPRASRTVPFVSKA G PLAK A+L+MSGK+L +L FT+EV
Sbjct: 836  QFAVIGAQTPQPQVYILEANPRASRTVPFVSKATGIPLAKLASLIMSGKTLEELNFTQEV 895

Query: 983  IPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSG 1042
            IP H++VKEAVLPF KF G D LLGPEMRSTGEVMGID+ F  A+AKA++ AG+KLPL+G
Sbjct: 896  IPLHIAVKEAVLPFNKFPGTDTLLGPEMRSTGEVMGIDVDFGRAYAKAELGAGEKLPLTG 955

Query: 1043 TVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGD 1102
            TVF+S+ND  K     + K F+D+GF I++T GT   L    + VE +LK+HEGRPH  D
Sbjct: 956  TVFVSMNDRDKAAAVNVVKEFIDLGFTIIATDGTRRILRENNLDVELILKLHEGRPHVLD 1015

Query: 1103 MVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTV 1162
             + N +IQ++V T SG+     D   +RR  L YK+P ITT++ A A A AIRSL++ T+
Sbjct: 1016 AIKNHKIQIIVNTPSGEEA-HTDARLIRRTALTYKIPTITTIAAAKATAAAIRSLQNTTL 1074

Query: 1163 TMTALQDF 1170
             + ALQ++
Sbjct: 1075 GVKALQEY 1082


>gi|427713984|ref|YP_007062608.1| carbamoyl-phosphate synthase large subunit [Synechococcus sp. PCC
            6312]
 gi|427378113|gb|AFY62065.1| carbamoyl-phosphate synthase large subunit [Synechococcus sp. PCC
            6312]
          Length = 1098

 Score = 1492 bits (3863), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 728/1104 (65%), Positives = 896/1104 (81%), Gaps = 28/1104 (2%)

Query: 86   LGKRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGL 145
            + +RTDL+KIL++G+GPIVIGQACEFDYSGTQACKAL+EEGYEVILINSNPATIMTDP  
Sbjct: 1    MPRRTDLKKILLIGSGPIVIGQACEFDYSGTQACKALREEGYEVILINSNPATIMTDPET 60

Query: 146  ADRTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKL 205
            ADRTYI P+TPE+VE+V+ KE+PDA+LPTMGGQTALNLAV+LA+SG LEKYGVELIGAKL
Sbjct: 61   ADRTYIEPLTPEIVEKVIAKEQPDAMLPTMGGQTALNLAVSLAKSGVLEKYGVELIGAKL 120

Query: 206  DAIKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGG 265
             AI+ AEDR LFK+AM  IGV   PSG+  T+ E  +IA++IG +PLIIRPAFTLGGTGG
Sbjct: 121  PAIEMAEDRKLFKEAMARIGVPVCPSGLAETMAESKAIAHQIGSYPLIIRPAFTLGGTGG 180

Query: 266  GIAYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDP 325
            GIAYN+EEFE I  +GL AS  SQ+L+E+SL+GWKEYELEVMRDLADNVVIICSIEN+DP
Sbjct: 181  GIAYNQEEFEEIAASGLDASPVSQILIEQSLIGWKEYELEVMRDLADNVVIICSIENIDP 240

Query: 326  MGVHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIE 385
            MG+HTGDSITVAPAQTLTDKEYQRLRD SI IIREIGVE GGSN+QFAVNP +G+ +VIE
Sbjct: 241  MGIHTGDSITVAPAQTLTDKEYQRLRDASIKIIREIGVETGGSNIQFAVNPDNGDFIVIE 300

Query: 386  MNPRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIP 445
            MNPRVSRSSALASKATGFPIAKMAAKL+VGY+LD+IPNDIT+KTPASFEP+IDYVVTKIP
Sbjct: 301  MNPRVSRSSALASKATGFPIAKMAAKLAVGYTLDEIPNDITRKTPASFEPTIDYVVTKIP 360

Query: 446  RFAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWD 505
            RFAFEKFPGS+ +LTTQMKSVGEAMA+GRTFQESFQKALRSLE G +GWGC   ++L   
Sbjct: 361  RFAFEKFPGSQAVLTTQMKSVGEAMAMGRTFQESFQKALRSLETGRAGWGCDQAEKLP-S 419

Query: 506  WEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQS 565
             E ++ +LR PNPDR+  +  AM  GM V++I+EL+ ID WFL +F+EL++ E+FL  ++
Sbjct: 420  LEHIRANLRTPNPDRILTVRQAMLMGMTVEDIYELTAIDPWFLHEFQELLETEKFLKRKA 479

Query: 566  VSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANT 625
            ++ +T D+ + VK++GFSD+QIA+ATKSTE +VR  R SL VIP YK VDTCAAEFEA T
Sbjct: 480  LTQITADEMWTVKQQGFSDRQIAYATKSTEDQVRAYRKSLAVIPVYKTVDTCAAEFEATT 539

Query: 626  PYMYSSYDF-----------------ECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCH 668
            PY YS+Y+                  + E  P  K +V+ILG GPNRIGQGIEFDYCCCH
Sbjct: 540  PYYYSAYERPTQRVNLESGQVETIAPDSEVLPATKPRVMILGSGPNRIGQGIEFDYCCCH 599

Query: 669  TSFSLQSAGYETIMMNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGG 728
             +++L + GYETIM+NSNPETVSTDYDTSDRLYFEPLT EDVLN+I++E+P G+I+QFGG
Sbjct: 600  AAYALSADGYETIMVNSNPETVSTDYDTSDRLYFEPLTKEDVLNIIEVEKPVGVIIQFGG 659

Query: 729  QTPLKLSLPIHQYLDEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPK 788
            QTPLKL++P+  YL++        +G  +IWGTSPDSID AEDRERF  I++EL I QP 
Sbjct: 660  QTPLKLAVPLQAYLNQQ-----GPEGTTKIWGTSPDSIDIAEDRERFERILRELDIPQPA 714

Query: 789  GGIAKSEADALAIAKEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVL 848
             G+A+S  +ALA+A+ I YPVVVRPSYVLGGRAMEIVY+D  L  Y+  AV V+P+ P+L
Sbjct: 715  NGLARSFNEALAVAQRISYPVVVRPSYVLGGRAMEIVYSDSELERYMTYAVLVEPDHPIL 774

Query: 849  IDKYLSDAIEIDVDALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTIS 908
            IDK+L +AIE+DVDA+AD+ GNVVIGG+MEHIEQAG+HSGDSAC +P +T+S   L+TI 
Sbjct: 775  IDKFLENAIEVDVDAIADAQGNVVIGGVMEHIEQAGIHSGDSACSLPPQTLSPQVLETIR 834

Query: 909  SWTIKLAKRLNVCGLMNCQYAITTSGD-VYLLEANPRASRTVPFVSKAIGHPLAKYAALV 967
            +W++ LAK LNV GLMN Q A+   GD ++++EANPRASRTVPFVSKAIG PLAK AA +
Sbjct: 835  AWSVSLAKALNVIGLMNLQLAV--QGDQIFMIEANPRASRTVPFVSKAIGIPLAKIAARL 892

Query: 968  MSGKSLNDLGFTKEVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAF 1027
            MSGK+L +LG T E IP HV+VKEAVLPFEKF G D LLGPEMRSTGE MGID+ F  AF
Sbjct: 893  MSGKTLAELGLTAEKIPNHVAVKEAVLPFEKFAGTDTLLGPEMRSTGEAMGIDVDFGQAF 952

Query: 1028 AKAQIAAGQKLPLSGTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIA- 1086
            AK+Q++A QKLPLSGTVF+S+++  K  +  + K    +GF++++T GT   L   G+  
Sbjct: 953  AKSQLSANQKLPLSGTVFVSMSNRDKKAIAPVIKDLQALGFQVLATEGTRAALLDSGLEN 1012

Query: 1087 VERVLKMHEGRPHAGDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSG 1146
            +E VLK+HEGRP+  D + N QI +++ T SG+   Q DG  +RR  L YK+P++TT++G
Sbjct: 1013 IELVLKLHEGRPNVLDAIKNQQIHLILNTPSGEEA-QADGRLIRRSALTYKIPMVTTIAG 1071

Query: 1147 ALANAEAIRSLKSNTVTMTALQDF 1170
            A A A AI++L++N + + A+QD+
Sbjct: 1072 AKATAAAIKALQTNPLQVKAIQDY 1095


>gi|220907091|ref|YP_002482402.1| carbamoyl phosphate synthase large subunit [Cyanothece sp. PCC 7425]
 gi|219863702|gb|ACL44041.1| carbamoyl-phosphate synthase, large subunit [Cyanothece sp. PCC 7425]
          Length = 1107

 Score = 1490 bits (3858), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 726/1104 (65%), Positives = 897/1104 (81%), Gaps = 24/1104 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            +RTDL+KIL++G+GPIVIGQACEFDYSGTQACKAL++EGYEV+LINSNPATIMTDP  AD
Sbjct: 3    RRTDLKKILLIGSGPIVIGQACEFDYSGTQACKALRDEGYEVVLINSNPATIMTDPDTAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
            RTYI P+TPELVE+V+ KERPDALLPTMGGQTALNLAV LA++G LEKYGVELIGAKL A
Sbjct: 63   RTYIEPLTPELVEKVIAKERPDALLPTMGGQTALNLAVTLAKTGVLEKYGVELIGAKLPA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I+KAEDR LFK+ M+ IGV   PSG+   + E  +IA  IG +PLIIRPAFTLGGTGGGI
Sbjct: 123  IEKAEDRKLFKEVMEEIGVGVCPSGLAENMAEAKAIAQRIGVYPLIIRPAFTLGGTGGGI 182

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEFE I ++GL AS  SQ+L+E+SL+GWKEYELEVMRD+ADNVVIICSIEN+DPMG
Sbjct: 183  AYNQEEFEEIAQSGLEASPVSQILIEQSLIGWKEYELEVMRDMADNVVIICSIENLDPMG 242

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            +HTGDSITVAPAQTLTDKEYQRLRD SI IIR IGVE GGSN+QFAVNP +G+V+VIEMN
Sbjct: 243  IHTGDSITVAPAQTLTDKEYQRLRDASIKIIRAIGVETGGSNIQFAVNPENGDVIVIEMN 302

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRF 447
            PRVSRSSALASKATGFPIAK AAKL+VGYSLD+I NDITKKTPASFEP+IDYVVTKIPRF
Sbjct: 303  PRVSRSSALASKATGFPIAKFAAKLAVGYSLDEISNDITKKTPASFEPTIDYVVTKIPRF 362

Query: 448  AFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDWE 507
            AFEKFPGS+P+LTTQMKSVGEAMA+GRTFQESFQKALRSLE G +GWGC   ++L    E
Sbjct: 363  AFEKFPGSQPVLTTQMKSVGEAMAIGRTFQESFQKALRSLETGRAGWGCDRNEKLP-SLE 421

Query: 508  QLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSVS 567
            Q++  LR PNP+R+  +  A   GM V+E+ EL+ ID WFL Q ++L++ E++L  +S+ 
Sbjct: 422  QIRAGLRTPNPERIFTVRHAFLMGMSVEEVFELTAIDPWFLRQIRDLLETEKYLKRRSLQ 481

Query: 568  NMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTPY 627
             +T ++F+ +K++GFSD+QIAFATKSTE +VR  R  LGV+P YK VDTCAAEFEA TPY
Sbjct: 482  QLTVEEFWAIKQQGFSDRQIAFATKSTEDDVRAYRKGLGVVPVYKTVDTCAAEFEAFTPY 541

Query: 628  MYSSYDF-----------------ECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTS 670
             YS+Y+                  E E  P+ K+KV+ILG GPNRIGQGIEFDYCCCH +
Sbjct: 542  YYSAYERPPLSLADPSESPLSLAPESEILPSSKRKVIILGSGPNRIGQGIEFDYCCCHAA 601

Query: 671  FSLQSAGYETIMMNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQT 730
            ++L++ G+ETIM+NSNPETVSTDYDTSDRLYFEPLT EDVLN+I+ E P GII+QFGGQT
Sbjct: 602  YALRADGFETIMVNSNPETVSTDYDTSDRLYFEPLTKEDVLNIIEAEHPAGIIIQFGGQT 661

Query: 731  PLKLSLPIHQYLDEHRL---PSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQP 787
            PLKL++P+  YL++ ++    S+    L  IWGTSPDSID AEDRERF  I++ L+I QP
Sbjct: 662  PLKLAVPLQDYLEKLKIQAEKSSDSSSLPVIWGTSPDSIDIAEDRERFEQILRTLNIAQP 721

Query: 788  KGGIAKSEADALAIAKEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPV 847
              G+A+S ++ALA+A+ I YPVVVRPSYVLGGRAMEIVY+D  L  Y+  AV+V+P+ P+
Sbjct: 722  PNGLARSYSEALAVARRISYPVVVRPSYVLGGRAMEIVYSDAELERYMTYAVQVEPDHPI 781

Query: 848  LIDKYLSDAIEIDVDALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTI 907
            LIDK+L +AIE+DVDA+AD  GNVVIGG+MEHIEQAG+HSGDSAC +P +++S+  LDTI
Sbjct: 782  LIDKFLENAIEVDVDAIADGQGNVVIGGVMEHIEQAGIHSGDSACTLPAQSLSNQVLDTI 841

Query: 908  SSWTIKLAKRLNVCGLMNCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALV 967
             +W I LAK+L V GLMN Q+A+     VY+LEANPRASRTVPFVSKAIG PLA+ AA +
Sbjct: 842  RTWAIALAKQLEVVGLMNLQFAVQGE-QVYILEANPRASRTVPFVSKAIGLPLAQIAARL 900

Query: 968  MSGKSLNDLGFTKEVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAF 1027
            MSG++L DL FT+E +P+H++VKEAVLPFEKF G D LLGPEMRSTGE MGID+ F  AF
Sbjct: 901  MSGRTLADLNFTQERLPQHIAVKEAVLPFEKFAGTDTLLGPEMRSTGEAMGIDLDFGKAF 960

Query: 1028 AKAQIAAGQKLPLSGTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIA- 1086
            AK+Q+AA Q+LPL GTVF+S+++  K  +  + K  +++GF++V+T+GT   L   G+  
Sbjct: 961  AKSQLAANQRLPLKGTVFVSMHNRDKVAVVPVVKDLIELGFQVVATAGTRQVLLEHGLTD 1020

Query: 1087 VERVLKMHEGRPHAGDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSG 1146
            VE VLK+HEGRP+  D + N +IQ+++ T SG+   Q+DG  +RR  LAYK+P+ITT++G
Sbjct: 1021 VELVLKLHEGRPNVLDWIKNEKIQLILNTPSGEDA-QVDGRLIRRSALAYKIPIITTIAG 1079

Query: 1147 ALANAEAIRSLKSNTVTMTALQDF 1170
            A A A AIR+L++  + + A+Q +
Sbjct: 1080 AKATAAAIRALQAGPLDVKAIQAY 1103


>gi|222424934|dbj|BAH20418.1| AT1G29900 [Arabidopsis thaliana]
          Length = 825

 Score = 1488 bits (3852), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 700/821 (85%), Positives = 763/821 (92%)

Query: 357  IIREIGVECGGSNVQFAVNPVDGEVMVIEMNPRVSRSSALASKATGFPIAKMAAKLSVGY 416
            IIREIGVECGGSNVQFAVNPVDGEVM+IEMNPRVSRSSALASKATGFPIAKMAAKLSVGY
Sbjct: 1    IIREIGVECGGSNVQFAVNPVDGEVMIIEMNPRVSRSSALASKATGFPIAKMAAKLSVGY 60

Query: 417  SLDQIPNDITKKTPASFEPSIDYVVTKIPRFAFEKFPGSEPLLTTQMKSVGEAMALGRTF 476
            +LDQIPNDIT+KTPASFEPSIDYVVTKIPRFAFEKFPGS+PLLTTQMKSVGE+MALGRTF
Sbjct: 61   TLDQIPNDITRKTPASFEPSIDYVVTKIPRFAFEKFPGSQPLLTTQMKSVGESMALGRTF 120

Query: 477  QESFQKALRSLECGFSGWGCSNVKELDWDWEQLKYSLRVPNPDRMQAIYAAMKKGMKVDE 536
            QESFQKALRSLECGFSGWGC+ +KELDWDW+QLKYSLRVPNPDR+ AIYAAMKKGMK+DE
Sbjct: 121  QESFQKALRSLECGFSGWGCAKIKELDWDWDQLKYSLRVPNPDRIHAIYAAMKKGMKIDE 180

Query: 537  IHELSFIDKWFLTQFKELIDVEQFLLTQSVSNMTKDDFYEVKRRGFSDKQIAFATKSTEK 596
            I+ELS +DKWFLTQ KEL+DVEQ+L++ ++S +TK+D YEVK+RGFSDKQIAFATK+TE+
Sbjct: 181  IYELSMVDKWFLTQLKELVDVEQYLMSGTLSEITKEDLYEVKKRGFSDKQIAFATKTTEE 240

Query: 597  EVREKRLSLGVIPSYKRVDTCAAEFEANTPYMYSSYDFECESAPTQKKKVLILGGGPNRI 656
            EVR KR+SLGV+PSYKRVDTCAAEFEA+TPYMYSSYD ECESAP  KKKVLILGGGPNRI
Sbjct: 241  EVRTKRISLGVVPSYKRVDTCAAEFEAHTPYMYSSYDVECESAPNNKKKVLILGGGPNRI 300

Query: 657  GQGIEFDYCCCHTSFSLQSAGYETIMMNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDL 716
            GQGIEFDYCCCHTSF+LQ AGYETIM+NSNPETVSTDYDTSDRLYFEPLT+EDVLNVIDL
Sbjct: 301  GQGIEFDYCCCHTSFALQDAGYETIMLNSNPETVSTDYDTSDRLYFEPLTIEDVLNVIDL 360

Query: 717  ERPEGIIVQFGGQTPLKLSLPIHQYLDEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFN 776
            E+P+GIIVQFGGQTPLKL+LPI  YLD+H   S SG G VRIWGTSPDSIDAA DRERFN
Sbjct: 361  EKPDGIIVQFGGQTPLKLALPIKHYLDKHMPMSLSGAGPVRIWGTSPDSIDAAGDRERFN 420

Query: 777  AIIKELSIEQPKGGIAKSEADALAIAKEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLE 836
            AI+ EL IEQPKGGIAKSEADALAIAKE+GYPVVVRPSYVLGGRAMEIVY D  L+TYLE
Sbjct: 421  AILDELKIEQPKGGIAKSEADALAIAKEVGYPVVVRPSYVLGGRAMEIVYDDSRLITYLE 480

Query: 837  NAVEVDPERPVLIDKYLSDAIEIDVDALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPT 896
            NAV+VDPERPVL+DKYLSDAIEIDVD L DS GNVVIGGIMEHIEQAGVHSGDSACM+PT
Sbjct: 481  NAVQVDPERPVLVDKYLSDAIEIDVDTLTDSYGNVVIGGIMEHIEQAGVHSGDSACMLPT 540

Query: 897  KTISSSCLDTISSWTIKLAKRLNVCGLMNCQYAITTSGDVYLLEANPRASRTVPFVSKAI 956
            +TI +SCL TI +WT KLAK+LNVCGLMNCQYAITTSGDV+LLEANPRASRTVPFVSKAI
Sbjct: 541  QTIPASCLQTIRTWTTKLAKKLNVCGLMNCQYAITTSGDVFLLEANPRASRTVPFVSKAI 600

Query: 957  GHPLAKYAALVMSGKSLNDLGFTKEVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEV 1016
            GHPLAKYAALVMSGKSL DL F KEVIPKHVSVKEAV PFEKFQGCDV+LGPEMRSTGEV
Sbjct: 601  GHPLAKYAALVMSGKSLKDLNFEKEVIPKHVSVKEAVFPFEKFQGCDVILGPEMRSTGEV 660

Query: 1017 MGIDMSFPIAFAKAQIAAGQKLPLSGTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGT 1076
            M I   F  AFA AQIAAGQKLPLSGTVFLSLND+TKPHLE+IA +FL++GFKIV+TSGT
Sbjct: 661  MSISSEFSSAFAMAQIAAGQKLPLSGTVFLSLNDMTKPHLEKIAVSFLELGFKIVATSGT 720

Query: 1077 AHFLELKGIAVERVLKMHEGRPHAGDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAY 1136
            AHFLELKGI VERVLK+HEGRPHA DMVANGQI +M+ITSSGD+LDQ DG +LR+  LAY
Sbjct: 721  AHFLELKGIPVERVLKLHEGRPHAADMVANGQIHLMLITSSGDALDQKDGRQLRQMALAY 780

Query: 1137 KVPVITTVSGALANAEAIRSLKSNTVTMTALQDFFDVETAS 1177
            KVPVITTV+GALA AE I+SLKS+ + MTALQDFF+V+  S
Sbjct: 781  KVPVITTVAGALATAEGIKSLKSSAIKMTALQDFFEVKNVS 821



 Score =  229 bits (584), Expect = 8e-57,   Method: Compositional matrix adjust.
 Identities = 138/402 (34%), Positives = 215/402 (53%), Gaps = 26/402 (6%)

Query: 93  RKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLADRTYIT 152
           +K+LILG GP  IGQ  EFDY       AL++ GYE I++NSNP T+ TD   +DR Y  
Sbjct: 288 KKVLILGGGPNRIGQGIEFDYCCCHTSFALQDAGYETIMLNSNPETVSTDYDTSDRLYFE 347

Query: 153 PMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKY---------GVELIGA 203
           P+T E V  V++ E+PD ++   GGQT L LA+ +     L+K+          V + G 
Sbjct: 348 PLTIEDVLNVIDLEKPDGIIVQFGGQTPLKLALPIKHY--LDKHMPMSLSGAGPVRIWGT 405

Query: 204 KLDAIKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGT 263
             D+I  A DR+ F   +  + ++ P  GI  +  + ++IA E+G +P+++RP++ LGG 
Sbjct: 406 SPDSIDAAGDRERFNAILDELKIEQPKGGIAKSEADALAIAKEVG-YPVVVRPSYVLGGR 464

Query: 264 GGGIAYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENV 323
              I Y+        +  +       VLV+K L    E +++ + D   NVVI   +E++
Sbjct: 465 AMEIVYDDSRLITYLENAVQVDPERPVLVDKYLSDAIEIDVDTLTDSYGNVVIGGIMEHI 524

Query: 324 DPMGVHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMV 383
           +  GVH+GDS  + P QT+     Q +R ++  + +++ V CG  N Q+A+    G+V +
Sbjct: 525 EQAGVHSGDSACMLPTQTIPASCLQTIRTWTTKLAKKLNV-CGLMNCQYAIT-TSGDVFL 582

Query: 384 IEMNPRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSI--DYVV 441
           +E NPR SR+    SKA G P+AK AA +  G SL  +          +FE  +   +V 
Sbjct: 583 LEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLKDL----------NFEKEVIPKHVS 632

Query: 442 TKIPRFAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKA 483
            K   F FEKF G + +L  +M+S GE M++   F  +F  A
Sbjct: 633 VKEAVFPFEKFQGCDVILGPEMRSTGEVMSISSEFSSAFAMA 674


>gi|428316191|ref|YP_007114073.1| carbamoyl-phosphate synthase large subunit [Oscillatoria
            nigro-viridis PCC 7112]
 gi|428239871|gb|AFZ05657.1| carbamoyl-phosphate synthase large subunit [Oscillatoria
            nigro-viridis PCC 7112]
          Length = 1103

 Score = 1488 bits (3851), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 721/1107 (65%), Positives = 878/1107 (79%), Gaps = 32/1107 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            +R DL+KIL++G+GPIVIGQACEFDYSGTQACKAL+EEG+EV+L+NSNPATIMTDP  AD
Sbjct: 3    RRQDLKKILLIGSGPIVIGQACEFDYSGTQACKALREEGFEVVLVNSNPATIMTDPETAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
            R YI P+TP ++EQ++ +ERP A+LPTMGGQTALNLAVA+A++G LEKY VELIGAKL A
Sbjct: 63   RIYIEPLTPVILEQIIAQERPQAILPTMGGQTALNLAVAVAKNGVLEKYKVELIGAKLPA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I+ AEDR LFK+AM  IGV   PSGI NTLDE  +I ++IG +PLIIRPAFT+GGTGGGI
Sbjct: 123  IEMAEDRLLFKEAMARIGVAVCPSGIANTLDEAKAIGHQIGSYPLIIRPAFTMGGTGGGI 182

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            +YN+EEFE + + G+ AS  SQ+L+E+SL+GWKEYELEVMRDLADNVVIICSIEN+DPMG
Sbjct: 183  SYNQEEFEEMAQGGIDASPVSQILIEQSLIGWKEYELEVMRDLADNVVIICSIENLDPMG 242

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQRLRD S+ IIREIGVE GGSN+QFAVNPV+G+ +VIEMN
Sbjct: 243  VHTGDSITVAPAQTLTDKEYQRLRDASVKIIREIGVETGGSNIQFAVNPVNGDFIVIEMN 302

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRF 447
            PRVSRSSALASKATGFPIAKMAAKL+VGY+LD+I NDITKKTPASFEP+IDYVVTKIPRF
Sbjct: 303  PRVSRSSALASKATGFPIAKMAAKLAVGYTLDEISNDITKKTPASFEPTIDYVVTKIPRF 362

Query: 448  AFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDWE 507
            AFEKFPGSEP LTTQMKSVGE MA+GR+F ESFQKALR LE G +G+GC   ++L    E
Sbjct: 363  AFEKFPGSEPTLTTQMKSVGEVMAIGRSFNESFQKALRGLETGRAGFGCDKPEKLP-SLE 421

Query: 508  QLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSVS 567
            Q++  LR PNP+R+  +  AM  GM V++I E + ID WFL + +EL++ E+FL    + 
Sbjct: 422  QIRAGLRTPNPERIFTVRHAMMMGMSVEDIFEFTGIDPWFLDKMQELLETEKFLKRTRLE 481

Query: 568  NMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTPY 627
             +TK+  +EVK+ GFSD+QIA+ATK++E +VR  R  LG+IP YK VDTCAAEFEA TPY
Sbjct: 482  ELTKETMFEVKQLGFSDRQIAYATKTSEDQVRAYRKQLGIIPIYKTVDTCAAEFEAFTPY 541

Query: 628  MYSSYDF-----------------------ECESAPTQKKKVLILGGGPNRIGQGIEFDY 664
             YS+Y+                        E E  P+ K+KV+ILGGGPNRIGQGIEFDY
Sbjct: 542  YYSTYEAGAAIWDLGDEEKKVSPVGHSLAPESEVLPSTKRKVMILGGGPNRIGQGIEFDY 601

Query: 665  CCCHTSFSLQSAGYETIMMNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIV 724
            CCCH S+SL   G+ETIM+NSNPETVSTDYDTSDRLYFEPLT EDVLN+I+ E PEGII+
Sbjct: 602  CCCHASYSLGEDGFETIMVNSNPETVSTDYDTSDRLYFEPLTKEDVLNIIEAENPEGIII 661

Query: 725  QFGGQTPLKLSLPIHQYLDEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSI 784
            QFGGQTPLKL++P+ + L+ H       D   +IWGTSPDSID AEDRERF  I++EL I
Sbjct: 662  QFGGQTPLKLAVPLQKALENHP------DVQTKIWGTSPDSIDTAEDRERFEKILRELDI 715

Query: 785  EQPKGGIAKSEADALAIAKEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPE 844
            +Q   G+A+S  DAL +A+ IGYPVVVRPSYVLGGRAMEIVY+D  L  Y+  AV V+P+
Sbjct: 716  QQAANGLARSFDDALIVAQRIGYPVVVRPSYVLGGRAMEIVYSDTELERYMTYAVLVEPD 775

Query: 845  RPVLIDKYLSDAIEIDVDALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCL 904
             P+LIDK+L +AIE+DVDA+AD  GNV IGGIMEHIE+AG+HSGDSAC IP +T+S + L
Sbjct: 776  HPILIDKFLENAIEVDVDAIADVTGNVTIGGIMEHIEEAGIHSGDSACSIPYQTLSEAAL 835

Query: 905  DTISSWTIKLAKRLNVCGLMNCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYA 964
             TI   T++LAK L V GLMN Q+A+     V++LEANPRASRTVPFVSKAIG PLAK A
Sbjct: 836  ATIRRQTVELAKALKVIGLMNIQFAVQGE-QVFILEANPRASRTVPFVSKAIGVPLAKMA 894

Query: 965  ALVMSGKSLNDLGFTKEVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFP 1024
            + VMSGK+L  LGFT+E+IP HVSVKEAVLPF KF G D LLGPEMRSTGEVMGID  F 
Sbjct: 895  SRVMSGKTLEALGFTEEIIPTHVSVKEAVLPFAKFPGTDTLLGPEMRSTGEVMGIDTDFG 954

Query: 1025 IAFAKAQIAAGQKLPLSGTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKG 1084
             AFAKAQ+  GQ +PL GTV +S+ D  K  +  + K FL++GFK+V+T GT   L  +G
Sbjct: 955  KAFAKAQLGTGQMMPLLGTVLVSMRDRDKIAVIPVVKEFLELGFKVVATHGTRKVLREQG 1014

Query: 1085 IAVERVLKMHEGRPHAGDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTV 1144
            + V+  LK+HEGRP+  D + N +IQ+++ T SG+   + DG+ +RR  L YK+P+ITT+
Sbjct: 1015 LEVDLELKLHEGRPNLLDSIKNEKIQLIITTPSGEE-SRADGIFIRRTALTYKIPIITTI 1073

Query: 1145 SGALANAEAIRSLKSNTVTMTALQDFF 1171
            +GA A A  IRSLKS+ + + A+QD++
Sbjct: 1074 AGAKATAAGIRSLKSHPMEVKAIQDYY 1100


>gi|428778901|ref|YP_007170687.1| carbamoyl-phosphate synthase large subunit [Dactylococcopsis salina
            PCC 8305]
 gi|428693180|gb|AFZ49330.1| carbamoyl-phosphate synthase, large subunit [Dactylococcopsis salina
            PCC 8305]
          Length = 1083

 Score = 1485 bits (3844), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 722/1087 (66%), Positives = 874/1087 (80%), Gaps = 14/1087 (1%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            +RTDL+KIL+LGAGPI+IGQACEFDYSGTQACKAL+EEGYEV+L+NSNPATIMTDP   +
Sbjct: 3    RRTDLKKILVLGAGPIIIGQACEFDYSGTQACKALREEGYEVVLVNSNPATIMTDPETTE 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
            RTYI P+T E+VE+V+ KERPDALLPTMGGQTALN+AV LA++G LE+Y VELIGAKL A
Sbjct: 63   RTYIEPLTAEIVEKVIAKERPDALLPTMGGQTALNVAVELAQAGILERYQVELIGAKLPA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIA-NEIGEFPLIIRPAFTLGGTGGG 266
            I  AEDR LFK+AM  I +   PSGI + L +  +IA  EIG +P+IIRPA+TLGG+GGG
Sbjct: 123  ITMAEDRQLFKEAMARINIPVCPSGIASNLKQARTIALEEIGSYPIIIRPAYTLGGSGGG 182

Query: 267  IAYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPM 326
            IAYN+EEFE   + GL AS  SQ+L+E+SLLGWKEYELEVMRDLADNVVIICSIEN+DPM
Sbjct: 183  IAYNQEEFEEKAQQGLDASPVSQILIERSLLGWKEYELEVMRDLADNVVIICSIENLDPM 242

Query: 327  GVHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEM 386
            GVHTGDSITVAPAQTLTDKEYQRLRDYS  IIREIGVE GGSN+QFAVNPVDGEV+VIEM
Sbjct: 243  GVHTGDSITVAPAQTLTDKEYQRLRDYSKQIIREIGVETGGSNIQFAVNPVDGEVVVIEM 302

Query: 387  NPRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPR 446
            NPRVSRSSALASKATGFPIAK AAKL+VGY+L++IPNDITK+TPASFEP+IDYVVTKIPR
Sbjct: 303  NPRVSRSSALASKATGFPIAKFAAKLAVGYTLNEIPNDITKQTPASFEPTIDYVVTKIPR 362

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            F FEKFPGS+P L+TQMKSVGEAMA+GRTF ESFQKALRSLE G  GWGC   ++L    
Sbjct: 363  FTFEKFPGSKPNLSTQMKSVGEAMAIGRTFCESFQKALRSLETGRYGWGCDQKEKLP-SV 421

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
             Q++  LR   PDR+  +  A + GM  +EIH+L+ ID WFL     +I  E+FL    +
Sbjct: 422  NQIRAQLRTATPDRIFTVRHAFQLGMTTEEIHQLTAIDPWFLNHLSSIIAGEKFLKATPL 481

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
              +T +   E+K+ GFSD QIAFAT++TE  V +KR  L + P YK VDTCAAEFEA TP
Sbjct: 482  EAITAEQMREIKQLGFSDPQIAFATETTEAAVAKKRGDLNIFPVYKMVDTCAAEFEAFTP 541

Query: 627  YMYSSY-DFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNS 685
            Y YS+Y + E E  P++K KV+ILGGGPNRIGQGIEFDYCCCH SFSL  AGYETIM+NS
Sbjct: 542  YYYSTYEEGESEVIPSEKPKVMILGGGPNRIGQGIEFDYCCCHASFSLSDAGYETIMVNS 601

Query: 686  NPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEH 745
            NPETVSTDYDTSDRLYFEPLT EDV N+I +ERP+GII+QFGGQTPLKL++ + +YLD+H
Sbjct: 602  NPETVSTDYDTSDRLYFEPLTREDVFNIIAVERPQGIIIQFGGQTPLKLAVSLEEYLDQH 661

Query: 746  R--LPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAK 803
            +  +P+       +IWGTSPDSID AEDRERF  I+++L I+QP  G+A+S  +AL IA 
Sbjct: 662  QDTIPT-------KIWGTSPDSIDIAEDRERFEQILRQLVIDQPPNGLARSYEEALVIAG 714

Query: 804  EIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDA 863
             IGYPVVVRPSYVLGGRAMEIVY+D+ L  Y+  AV+V+PE P+LIDK+L +AIE+DVDA
Sbjct: 715  NIGYPVVVRPSYVLGGRAMEIVYSDQELEHYMSFAVQVEPEHPILIDKFLENAIEVDVDA 774

Query: 864  LADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGL 923
            +AD  GNVVIGGIMEHIEQAG+HSGDSAC +P  ++S + ++TI   T +LAK L V GL
Sbjct: 775  IADQQGNVVIGGIMEHIEQAGIHSGDSACSLPYVSLSETVVNTIRKGTEQLAKALKVVGL 834

Query: 924  MNCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVI 983
            MN Q+A+     VY+LEANPRASRTVPFVSKA G PLAK A+LVMSG++L +L FT+E  
Sbjct: 835  MNIQFAVQGE-TVYILEANPRASRTVPFVSKATGVPLAKIASLVMSGQTLPELNFTQEPQ 893

Query: 984  PKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGT 1043
            P+H++VKEAVLPFEKF   DV+LGPEMRSTGEVMGID  F  AFAKA++AAGQ+LPLSGT
Sbjct: 894  PRHIAVKEAVLPFEKFPETDVILGPEMRSTGEVMGIDYDFGKAFAKAELAAGQRLPLSGT 953

Query: 1044 VFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDM 1103
            VF+S ND  K  +  + K F+ +GF I++T GT   LE +G+ V  +LK+H+GRPH  D 
Sbjct: 954  VFVSTNDRDKKAVIPVIKEFIALGFNIIATEGTKVALEAEGLTVGLLLKLHQGRPHVLDA 1013

Query: 1104 VANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTVT 1163
            + N +IQ+++ T +G    Q DG  +RR  LAYK+P++TT++GA AN + IRSL+S ++ 
Sbjct: 1014 IKNREIQLIINTPTGQEA-QTDGQLIRRTALAYKIPMVTTIAGANANVQGIRSLQSGSLD 1072

Query: 1164 MTALQDF 1170
            + ALQD+
Sbjct: 1073 VKALQDY 1079


>gi|359462692|ref|ZP_09251255.1| carbamoyl phosphate synthase large subunit [Acaryochloris sp. CCMEE
            5410]
          Length = 1080

 Score = 1484 bits (3841), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 725/1083 (66%), Positives = 875/1083 (80%), Gaps = 10/1083 (0%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            +R DL KIL++G+GPIVIGQACEFDYSGTQACKAL++EGYEV+LINSNPATIMTDP  A+
Sbjct: 3    RRDDLHKILLIGSGPIVIGQACEFDYSGTQACKALRDEGYEVVLINSNPATIMTDPETAE 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
            R YI P+TPELVE+V+ KERPDALLPTMGGQTALNLAV LA++G L+KY VELIGAKL A
Sbjct: 63   RIYIEPLTPELVEKVIAKERPDALLPTMGGQTALNLAVTLAKAGVLDKYNVELIGAKLPA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I+ AEDR LFK+AM+ IG+   PSG+  T+ E   IA EIG +PLI+RPAFTLGGTGGGI
Sbjct: 123  IEMAEDRKLFKEAMERIGLGVCPSGLAETMAESQQIAQEIGTYPLIVRPAFTLGGTGGGI 182

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEFE I ++GL AS  SQ+L+EKSL+GWKEYELEVMRDL DNVVIICSIEN+DPMG
Sbjct: 183  AYNQEEFEVIAQSGLDASPVSQILIEKSLIGWKEYELEVMRDLVDNVVIICSIENIDPMG 242

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQRLRD SI IIREIGVE GGSN+QFAVNP DGEV+VIEMN
Sbjct: 243  VHTGDSITVAPAQTLTDKEYQRLRDASIKIIREIGVETGGSNIQFAVNPDDGEVIVIEMN 302

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRF 447
            PRVSRSSALASKATGFPIAK AAKL+VGY+L +IPNDIT+KTPASFEPSIDYVVTKIPRF
Sbjct: 303  PRVSRSSALASKATGFPIAKFAAKLAVGYALSEIPNDITRKTPASFEPSIDYVVTKIPRF 362

Query: 448  AFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDWE 507
            AFEKFPGSEP LTTQMKSVGEAMA+GRTFQESFQKALRSLE G  GWGC   + L    E
Sbjct: 363  AFEKFPGSEPTLTTQMKSVGEAMAIGRTFQESFQKALRSLETGRFGWGCDQAENLP-SLE 421

Query: 508  QLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSVS 567
            Q++ SLR PNP+R+  +  A++ G+ V+EI++++ ID WFL  F++L+  E +L   ++ 
Sbjct: 422  QIRASLRNPNPERIYTVRHALQAGLSVEEIYDITGIDPWFLWHFQDLLTTEAYLKQTNLY 481

Query: 568  NMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTPY 627
            ++T D  +++K++GFSD QIAFAT++ E EVR  R  LGV+P+YK VDTCAAEFEA TPY
Sbjct: 482  DLTADLMWQIKQQGFSDPQIAFATQANEDEVRNYRKQLGVVPAYKTVDTCAAEFEALTPY 541

Query: 628  MYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSNP 687
             YS+Y+ E E  P+ ++KV+ILG GPNRIGQGIEFDYCCCH S++LQ+  +ETIM+NSNP
Sbjct: 542  YYSTYEQESEVLPSDRRKVMILGSGPNRIGQGIEFDYCCCHASYALQADDFETIMVNSNP 601

Query: 688  ETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHRL 747
            ETVSTDYDTSDRLYFEPLT EDVLN+++ E PEGII+QFGGQTPLKL++P+  YL     
Sbjct: 602  ETVSTDYDTSDRLYFEPLTKEDVLNILEAENPEGIIIQFGGQTPLKLAVPLQTYL----- 656

Query: 748  PSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEIGY 807
                 DG  +IWGTSPDSID AEDRERF  I+  L+I QP  GIA+S  +A  +A+ I Y
Sbjct: 657  -QGKPDG-PKIWGTSPDSIDIAEDRERFEQILHTLNITQPPNGIARSSQEATEVAQRIQY 714

Query: 808  PVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALADS 867
            PVVVRPSYVLGGRAMEIVY+D  L  Y+  AV+V+P+ P+LIDK+L DAIE+DVDA++D 
Sbjct: 715  PVVVRPSYVLGGRAMEIVYSDAELERYMTFAVQVEPDHPILIDKFLEDAIEVDVDAISDR 774

Query: 868  CGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNCQ 927
             G VVIGGIMEHIEQAGVHSGDSAC IPT ++    L TI  W+ +LA++LNV GLMN Q
Sbjct: 775  TGEVVIGGIMEHIEQAGVHSGDSACAIPTLSLGEETLATIREWSKQLAQQLNVIGLMNLQ 834

Query: 928  YAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPKHV 987
            +A+     VY+LEANPRASRTVPFVSKAIG PLA+ AA +MSG++L DLG  +E IPKH+
Sbjct: 835  FAVQGE-QVYILEANPRASRTVPFVSKAIGLPLAQVAARLMSGQTLADLGIKEERIPKHI 893

Query: 988  SVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVFLS 1047
            SVKEAVLPF KF G D +LGPEMRSTGE MGID  F  AFAK+Q +A Q LP SG+VF+S
Sbjct: 894  SVKEAVLPFAKFPGTDTILGPEMRSTGEAMGIDTDFGKAFAKSQFSAHQDLPQSGSVFVS 953

Query: 1048 LNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVANG 1107
            + D  K  +  I +  +D+GFK+V+T+GT   LE +G  V  VLK+HEGRP+  D++ N 
Sbjct: 954  MTDRDKQAVIPIVRDLIDLGFKLVATAGTQKVLEAEGFEVAPVLKLHEGRPNVLDLIKNR 1013

Query: 1108 QIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTVTMTAL 1167
            Q+Q+++ T SG S    DG  +RR  LAYK+P+ITT++GA A A A+RSL+S T+ + A+
Sbjct: 1014 QVQLILNTPSG-SDAHADGRLIRRSALAYKIPLITTIAGAKATAAALRSLQSETMDVKAI 1072

Query: 1168 QDF 1170
            QD+
Sbjct: 1073 QDY 1075


>gi|86607714|ref|YP_476476.1| carbamoyl phosphate synthase large subunit [Synechococcus sp.
            JA-2-3B'a(2-13)]
 gi|86556256|gb|ABD01213.1| carbamoyl-phosphate synthase, large subunit [Synechococcus sp.
            JA-2-3B'a(2-13)]
          Length = 1082

 Score = 1483 bits (3839), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 725/1084 (66%), Positives = 881/1084 (81%), Gaps = 17/1084 (1%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            +RTD+ KIL++GAGPIVIGQACEFDYSGTQACKAL+EEGYEV+L+NSNPATIMTDP +A+
Sbjct: 3    RRTDIHKILLIGAGPIVIGQACEFDYSGTQACKALREEGYEVVLVNSNPATIMTDPSMAE 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
            RTYI P+T + V +++E+ERPDALLPTMGGQTALN+AV LA+ G LE+YGVELIGAK +A
Sbjct: 63   RTYIEPVTVDFVAKIIERERPDALLPTMGGQTALNVAVQLAQQGILEQYGVELIGAKREA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I+KAEDRDLFKQAM+ IG+  P SG+ +TL+E   IA EIG +PLIIRPA+TLGGTGGG+
Sbjct: 123  IEKAEDRDLFKQAMQRIGLAVPRSGLAHTLEEAKQIAQEIG-YPLIIRPAYTLGGTGGGV 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEFE IC AGL AS  SQ+LVE+S++GWKE+ELEVMRDLADNVVIICSIEN+DPMG
Sbjct: 182  AYNQEEFEEICAAGLEASPVSQILVEESVIGWKEFELEVMRDLADNVVIICSIENMDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQRLRDY+IAI+REIGVE GGSNVQFAVNP +GEV VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQRLRDYAIAIMREIGVETGGSNVQFAVNPANGEVRVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRF 447
            PRVSRSSALASKATGFPIAK+AAKL+VGY+L +IPNDIT+KTPASFEP+IDYVVTKIPRF
Sbjct: 302  PRVSRSSALASKATGFPIAKIAAKLAVGYTLPEIPNDITRKTPASFEPTIDYVVTKIPRF 361

Query: 448  AFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDWE 507
            AFEKFPG+EP+LTTQMKSVGEAMA+GRTFQES QKALRSLE    G+G S+  E+    E
Sbjct: 362  AFEKFPGAEPVLTTQMKSVGEAMAIGRTFQESIQKALRSLEIDRPGFG-SDRPEVFPKPE 420

Query: 508  QLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSVS 567
            +++ +LR PNP R+  I  A+  G    EI +L+ ID WF+ + +EL++VEQ L  + + 
Sbjct: 421  EVRANLRTPNPFRLLTIRTALLMGFSAQEIAQLTHIDPWFIDKLQELVEVEQALKGRELG 480

Query: 568  NMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTPY 627
            +++ DD   +K+ GFSD+QIA  T STE +VR  R SLGVIP+YK VDTCAAEFEA TPY
Sbjct: 481  SLSADDLRHLKQMGFSDRQIAHLTGSTEHQVRACRKSLGVIPTYKTVDTCAAEFEAATPY 540

Query: 628  MYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSNP 687
             YS+Y+ E E  P +K+KV+ILGGGPNRIGQGIEFDYCCCH +F+L   GYE IM+NSNP
Sbjct: 541  QYSTYESESEIFPARKEKVMILGGGPNRIGQGIEFDYCCCHAAFALSRLGYEAIMVNSNP 600

Query: 688  ETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHRL 747
            ETVSTDYDT+DRLYFEPLT E+V+N++D E+P G+IVQFGGQTPLKL+            
Sbjct: 601  ETVSTDYDTADRLYFEPLTHEEVMNLVDAEQPVGLIVQFGGQTPLKLA------------ 648

Query: 748  PSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEIGY 807
                      IWGTSPDSID AEDR RF  I++EL I QP  GIA+S  ++L IA+ IGY
Sbjct: 649  -QGLAAAQAPIWGTSPDSIDIAEDRGRFERILRELDIRQPANGIARSVEESLEIARRIGY 707

Query: 808  PVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALADS 867
            PVVVRPSYVLGGRAMEIVY+D+ L  Y++ AV VDP+RPVL+D++L +A+E+DVDA+AD 
Sbjct: 708  PVVVRPSYVLGGRAMEIVYSDQDLQRYMQLAVAVDPDRPVLVDQFLEEAVEVDVDAIADR 767

Query: 868  CGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNCQ 927
             G V IGGI+EHIEQAG+HSGDSAC++P++T+S   L  I  WT+KLA+ L V GL+N Q
Sbjct: 768  TGAVTIGGILEHIEQAGIHSGDSACVLPSRTLSPEVLRVIREWTVKLAQALKVVGLINVQ 827

Query: 928  YAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPKHV 987
            YA+   G VY+LEANPRASRTVPFVSKAIGHPLA YAA VMSGK+L +LGFT+EVIP H+
Sbjct: 828  YAV-QKGQVYILEANPRASRTVPFVSKAIGHPLADYAAQVMSGKTLEELGFTQEVIPSHI 886

Query: 988  SVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVFLS 1047
            +VKEAVLPF KF G D LLGPEMRSTGEVMGID  F  A+AKAQ+AAGQ LPL GTVF+S
Sbjct: 887  AVKEAVLPFHKFPGTDTLLGPEMRSTGEVMGIDTDFGRAYAKAQLAAGQNLPLQGTVFIS 946

Query: 1048 LNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVANG 1107
            ++D  K  +  +A+ F+ +GF++++T GT   L   GI V++VLK+HEGRPH  D + N 
Sbjct: 947  VSDRDKQAVIPVAREFVGLGFRLLATEGTQKVLAEHGIPVDKVLKLHEGRPHVIDAIKNH 1006

Query: 1108 QIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTVTMTAL 1167
            QIQ+++ T SG    Q DG K+RR  LAYK+P++TT++GA A A AIR+L+S ++ +  L
Sbjct: 1007 QIQLIINTPSGVEAQQ-DGQKIRRTALAYKIPLVTTLAGAKATAAAIRALQSGSLQVKCL 1065

Query: 1168 QDFF 1171
            QDFF
Sbjct: 1066 QDFF 1069


>gi|434384471|ref|YP_007095082.1| carbamoyl-phosphate synthase, large subunit [Chamaesiphon minutus PCC
            6605]
 gi|428015461|gb|AFY91555.1| carbamoyl-phosphate synthase, large subunit [Chamaesiphon minutus PCC
            6605]
          Length = 1085

 Score = 1481 bits (3833), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 722/1086 (66%), Positives = 884/1086 (81%), Gaps = 9/1086 (0%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            +RTD+ KIL+LG+GPI IGQ CEFDYSGTQACKAL+EEGY VIL+NSNPATIMTDP  AD
Sbjct: 3    RRTDIHKILLLGSGPIAIGQGCEFDYSGTQACKALREEGYYVILVNSNPATIMTDPDTAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
            RTYI P+TPELVE+V+ KERPDALLPTMGGQTALN+AV+L++SG L+KYGVELIGAKL A
Sbjct: 63   RTYIEPLTPELVEKVIIKERPDALLPTMGGQTALNIAVSLSKSGVLDKYGVELIGAKLPA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I+ AEDR LFK+AM  IGV   PSGI  +L E   +A +IG +PLIIRPAFTLGG GGGI
Sbjct: 123  IEMAEDRLLFKEAMARIGVPVCPSGIATSLLEAREVAKQIGTYPLIIRPAFTLGGAGGGI 182

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEFEAI   GL AS   Q+LVEKSLLGWKEYELEVMRDLADNVVIICSIEN+DPMG
Sbjct: 183  AYNQEEFEAIVHTGLDASPVDQILVEKSLLGWKEYELEVMRDLADNVVIICSIENIDPMG 242

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            +HTGDSITVAPAQTLTDKEYQRLRD SI IIREIGVE GGSN+QFAV+P  GE +VIEMN
Sbjct: 243  IHTGDSITVAPAQTLTDKEYQRLRDASIKIIREIGVETGGSNIQFAVHPHTGEFIVIEMN 302

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRF 447
            PRVSRSSALASKATGFPIAK AAKL+VGY+LD+IPNDITKKTPASFEP+IDYVVTKIPRF
Sbjct: 303  PRVSRSSALASKATGFPIAKFAAKLAVGYTLDEIPNDITKKTPASFEPTIDYVVTKIPRF 362

Query: 448  AFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDWE 507
            AFEKF GS   LTTQMKSVGEAMA+GRTFQESFQKALRSLE G  GWGC   + L    E
Sbjct: 363  AFEKFAGSSQTLTTQMKSVGEAMAIGRTFQESFQKALRSLEIGRFGWGCDRDESLP-SIE 421

Query: 508  QLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSVS 567
            Q++  LR P PDR+ +I  AM+  + V++I+EL+ +D WFL + ++++  E FL TQ ++
Sbjct: 422  QVRSMLRTPTPDRIFSIRHAMQLKLSVEDIYELTGVDPWFLDKMQDILTTESFLKTQQLT 481

Query: 568  NMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTPY 627
            ++TK   +++KR+GFSD+QIA+ATK+TE  VR  R SLGV+P+YK VDTCAAEFEA TPY
Sbjct: 482  SLTKPQLWDIKRQGFSDRQIAYATKTTEDIVRTYRKSLGVVPAYKLVDTCAAEFEAETPY 541

Query: 628  MYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSNP 687
             YS+Y+ E E  P+ ++KV+ILGGGPNRIGQGIEFDYCCCH +++L   G+ETIM+NSNP
Sbjct: 542  YYSTYEEETEVIPSTRRKVMILGGGPNRIGQGIEFDYCCCHAAYALSKQGFETIMVNSNP 601

Query: 688  ETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHRL 747
            ETVSTDYDTSDRLYFEPLT EDVLN+I+ E+PEGII+QFGGQTPLKL++P+  YL     
Sbjct: 602  ETVSTDYDTSDRLYFEPLTKEDVLNIIEAEQPEGIIIQFGGQTPLKLAVPLQSYLTAQ-- 659

Query: 748  PSASGDGL-VRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEIG 806
             +   +G+  +IWGTSPDSID AEDRERF  ++++L I+QP  G+A+   DAL +A  IG
Sbjct: 660  -ANEPNGVQTKIWGTSPDSIDMAEDRERFELVLRQLDIQQPANGMARDYDDALLVANRIG 718

Query: 807  YPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALAD 866
            YPVVVRPSYVLGGRAMEIVY+D  L  Y+  AV+V+P+ P+LIDK+L +AIE+DVDA+AD
Sbjct: 719  YPVVVRPSYVLGGRAMEIVYSDTELERYMTYAVQVEPDHPILIDKFLENAIEVDVDAIAD 778

Query: 867  SCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNC 926
            + G+VVIGGIMEHIEQAG+HSGDSAC +P  ++S + + TI  WT++LA+ L V GLMN 
Sbjct: 779  ASGHVVIGGIMEHIEQAGIHSGDSACSLPYVSLSDNTIATIRQWTVQLARSLKVIGLMNI 838

Query: 927  QYAITTSGD-VYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPK 985
            Q+A+   GD VY++EANPRASRTVPFV+KA G PLA YAA +MSG++L  L +T EVIP 
Sbjct: 839  QFAV--QGDRVYIIEANPRASRTVPFVAKATGVPLAGYAARIMSGETLTSLDYTAEVIPT 896

Query: 986  HVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVF 1045
            H++VKEAVLPF++F G D +LGPEMRSTGEVMGID+ F  A+AKA++AAGQKLPL+G VF
Sbjct: 897  HIAVKEAVLPFDRFPGTDTILGPEMRSTGEVMGIDVEFGRAYAKAELAAGQKLPLTGKVF 956

Query: 1046 LSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVA 1105
            +S +D  K  +  +A+  + +GFKI++TSGT   LE  G+ VE VLK+HEGRP+  D++ 
Sbjct: 957  ISTSDRDKIAVVPVARDLIALGFKIIATSGTKKVLEEHGLVVESVLKLHEGRPNVVDIIK 1016

Query: 1106 NGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTVTMT 1165
            NGQIQ+++ T SG+   Q DG  +RR  L YK+ ++TT++GA A A AI +L+S+ + + 
Sbjct: 1017 NGQIQLIINTPSGEEA-QADGKLIRRTALVYKIGMVTTIAGAKATAAAIAALQSHPLEVK 1075

Query: 1166 ALQDFF 1171
            ALQD+ 
Sbjct: 1076 ALQDYI 1081


>gi|428775413|ref|YP_007167200.1| carbamoyl-phosphate synthase large subunit [Halothece sp. PCC 7418]
 gi|428689692|gb|AFZ42986.1| carbamoyl-phosphate synthase large subunit [Halothece sp. PCC 7418]
          Length = 1086

 Score = 1477 bits (3823), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 723/1090 (66%), Positives = 871/1090 (79%), Gaps = 15/1090 (1%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            +RTDL+KIL+LGAGPI+IGQACEFDYSGTQACKAL+EEGY+V+L+NSNPATIMTDP   +
Sbjct: 3    RRTDLKKILVLGAGPIIIGQACEFDYSGTQACKALREEGYDVVLVNSNPATIMTDPETTE 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
            RTYI P+TPE+VE+++ KERPDALLPTMGGQTALN+AV LA +G LE Y V+LIGAKL A
Sbjct: 63   RTYIEPLTPEIVEKIIAKERPDALLPTMGGQTALNVAVDLANAGVLEAYNVDLIGAKLPA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIAN-EIGEFPLIIRPAFTLGGTGGG 266
            I+ AEDR LFK+AM  I +   PSGI ++L+E   IA  EIG +P+IIRPA+TLGG+GGG
Sbjct: 123  IEMAEDRLLFKEAMARIDIPVCPSGIASSLEEAKIIAQQEIGSYPIIIRPAYTLGGSGGG 182

Query: 267  IAYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPM 326
            IAYN+EEFE   + GL AS  SQ+L+E+SLLGWKEYELEVMRDLADNVVIICSIEN+DPM
Sbjct: 183  IAYNQEEFEEKAQLGLDASPVSQILIERSLLGWKEYELEVMRDLADNVVIICSIENLDPM 242

Query: 327  GVHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEM 386
            GVHTGDSITVAPAQTLTDKEYQRLRDYS  IIREIGVE GGSN+QFAVNP DGEV+VIEM
Sbjct: 243  GVHTGDSITVAPAQTLTDKEYQRLRDYSKKIIREIGVETGGSNIQFAVNPDDGEVVVIEM 302

Query: 387  NPRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPR 446
            NPRVSRSSALASKATGFPIAK AAKL+VGY+LD+IPNDITKKTPASFEP+IDYVVTKIPR
Sbjct: 303  NPRVSRSSALASKATGFPIAKFAAKLAVGYTLDEIPNDITKKTPASFEPTIDYVVTKIPR 362

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDW-- 504
            F FEKFPGS P LTTQMKSVGEAMA+GRTF ESFQKALRSLE G  GWGC+ +       
Sbjct: 363  FTFEKFPGSTPNLTTQMKSVGEAMAIGRTFCESFQKALRSLETGRMGWGCTPLTSRGGLP 422

Query: 505  DWEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQ 564
               Q++ SLR   P+R+ A++ A   GM V+EIH+L+ ID WFLT  + +I  E+FL   
Sbjct: 423  SITQVRASLRTATPERIFAVHHAFHLGMTVEEIHQLTSIDPWFLTNMERIIAGEKFLKAT 482

Query: 565  SVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEAN 624
             +  +T +   E+K+ GFSD QIAFAT++TE  V +KR  L V P YK VDTCAAEFEA 
Sbjct: 483  PLDQITAEQMREIKQLGFSDPQIAFATQTTEAAVADKRRELNVFPVYKMVDTCAAEFEAF 542

Query: 625  TPYMYSSYDF-ECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMM 683
            TPY YS+Y+  E E  P++K KV+ILGGGPNRIGQGIEFDYCCCH SFSL  AGYETIM+
Sbjct: 543  TPYYYSTYEVGETEVIPSEKPKVMILGGGPNRIGQGIEFDYCCCHASFSLGDAGYETIMV 602

Query: 684  NSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLD 743
            NSNPETVSTDYDTSDRLYFEPLT EDV N+I +ERP GII+QFGGQTPLKL++ + +YL 
Sbjct: 603  NSNPETVSTDYDTSDRLYFEPLTREDVFNIIAVERPRGIIIQFGGQTPLKLAVSLEEYLH 662

Query: 744  EHR--LPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAI 801
             H+  +P+       +IWGTSPDSID AEDRERF  I+++L I+QP  G+A+S  +AL I
Sbjct: 663  RHQDTIPT-------KIWGTSPDSIDIAEDRERFEQILRQLVIDQPPNGLARSYDEALVI 715

Query: 802  AKEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDV 861
            A  IGYPVVVRPSYVLGGRAMEIVY+D  L  Y+  AV+V+PE P+LIDK+L +AIE+DV
Sbjct: 716  AGNIGYPVVVRPSYVLGGRAMEIVYSDAELEHYMNFAVQVEPEHPILIDKFLENAIEVDV 775

Query: 862  DALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVC 921
            DA+AD  GNVVIGGIMEHIEQAG+HSGDSAC +P  ++S + L TI   T +LA  L V 
Sbjct: 776  DAIADQEGNVVIGGIMEHIEQAGIHSGDSACSLPYVSLSETVLATIRKATAQLATALKVV 835

Query: 922  GLMNCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKE 981
            GLMN Q+A+     VY+LEANPRASRTVPFVSKA G PLAK A+LVMSGK+L +L FT+E
Sbjct: 836  GLMNIQFAVQGE-TVYILEANPRASRTVPFVSKATGFPLAKLASLVMSGKTLAELNFTEE 894

Query: 982  VIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLS 1041
              P H++VKEAV PF+KF G DV+LGPEMRSTGEVMGID  F  AFAKA++AAGQ+LPLS
Sbjct: 895  PRPDHIAVKEAVFPFDKFPGTDVILGPEMRSTGEVMGIDYEFGKAFAKAELAAGQRLPLS 954

Query: 1042 GTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAG 1101
            GTVF+S N+  K  +  + K F+++GF I++T GT   LE +G+ V  +LK+H+GRPH  
Sbjct: 955  GTVFVSTNNRDKQLVIPVVKDFIELGFDIIATEGTKAALEAEGLEVGLLLKLHQGRPHVL 1014

Query: 1102 DMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNT 1161
            D + N +IQ+++ T +G    Q DG  +RR  LAYK+P++TT++GA AN  AIR+L+S +
Sbjct: 1015 DAIKNRKIQLIINTPTGQEA-QTDGQLIRRTALAYKIPMVTTIAGARANVAAIRALQSGS 1073

Query: 1162 VTMTALQDFF 1171
            + + ALQ++ 
Sbjct: 1074 LDVKALQEYI 1083


>gi|284929083|ref|YP_003421605.1| carbamoyl-phosphate synthase large subunit [cyanobacterium UCYN-A]
 gi|284809542|gb|ADB95247.1| carbamoyl-phosphate synthase large subunit [cyanobacterium UCYN-A]
          Length = 1081

 Score = 1474 bits (3817), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 721/1086 (66%), Positives = 873/1086 (80%), Gaps = 10/1086 (0%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            +R DL+KI+ILGAGPIVIGQACEFDYSGTQACKAL+EEGYEVIL+NSNPA+IMTDP ++D
Sbjct: 3    RRDDLKKIMILGAGPIVIGQACEFDYSGTQACKALREEGYEVILVNSNPASIMTDPEMSD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
            RTYI P+ P++VE+++ KERPDALL TMGGQTALN+AV+LA+SG LEKY VELIGA+L A
Sbjct: 63   RTYIEPLVPDIVEKIIAKERPDALLATMGGQTALNIAVSLAKSGVLEKYNVELIGARLSA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I+KAEDR+LFK+AM +IGV   PSGI NTL E   IA  IG +PLIIRPAFTLGGTGGGI
Sbjct: 123  IEKAEDRELFKKAMDSIGVPVCPSGIANTLKEAREIAINIGSYPLIIRPAFTLGGTGGGI 182

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AY++EEFE I + GL AS  SQ+LVE+SLLGWKEYELEVMRDLADNVVIICSIEN DPMG
Sbjct: 183  AYHQEEFEDIVQTGLDASPMSQILVEQSLLGWKEYELEVMRDLADNVVIICSIENFDPMG 242

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ+LRDYS +IIREIGVE GG+N+QF+VNP +G+ +VIEMN
Sbjct: 243  VHTGDSITVAPAQTLTDKEYQKLRDYSKSIIREIGVETGGANIQFSVNPANGDTIVIEMN 302

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRF 447
            PRVSRSSALASKATGFPIAK AAKL+VGY+L++I NDIT+KTPASFEP++DYVVTKIPRF
Sbjct: 303  PRVSRSSALASKATGFPIAKFAAKLAVGYTLNEISNDITRKTPASFEPTLDYVVTKIPRF 362

Query: 448  AFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDWE 507
            AFEKFPGS+ +LTTQMKSVGE MA+GRTFQESFQKALRSLE GF+G+ C     L    E
Sbjct: 363  AFEKFPGSQAILTTQMKSVGEVMAIGRTFQESFQKALRSLETGFNGFTCDQKSTLPSPSE 422

Query: 508  QLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSVS 567
             ++  L++ +PDR+  IY A+K  + ++EIH L+ ID WFL + K++ D E++L    + 
Sbjct: 423  -VRSELQISSPDRIYTIYKALKLDITIEEIHNLTAIDIWFLDKLKDIFDTEKYLRQIILK 481

Query: 568  NMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTPY 627
            N+ K+    +K++GFSD QIA  T  TE EVR+ R SLGVIP YK VDTCAAEFEA TPY
Sbjct: 482  NIDKEKMRVIKQKGFSDCQIASITNHTEDEVRKYRKSLGVIPVYKVVDTCAAEFEAFTPY 541

Query: 628  MYSSYDFE-CESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSN 686
             YS+Y+ E  E   T+K K++ILGGGPNRIGQGIEFDYCCCH SF+L   GYETIM+NSN
Sbjct: 542  YYSTYELEDTEVLFTKKPKIMILGGGPNRIGQGIEFDYCCCHASFALSQDGYETIMVNSN 601

Query: 687  PETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHR 746
            PETVSTDYDTSDRLYFEPLT ED+LN+I++E PEG+I+QFGGQTPLKL++P+ +Y D   
Sbjct: 602  PETVSTDYDTSDRLYFEPLTREDILNIIEVENPEGVIIQFGGQTPLKLAVPLQEYFDN-- 659

Query: 747  LPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEIG 806
             PS+      +IWGT PDSID AEDRERF  I+ +L I++P GGIA+S   +L+IA  IG
Sbjct: 660  -PSSCVQ--TKIWGTPPDSIDLAEDRERFEKILCDLQIKKPPGGIARSFEQSLSIASNIG 716

Query: 807  YPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALAD 866
            YPVVVRPSYVLGGRAM IVY+D+ L  Y++ A++V+P+ P+LIDK+L DA+E+DVDAL D
Sbjct: 717  YPVVVRPSYVLGGRAMRIVYSDKELKHYMDYAIQVEPDHPILIDKFLEDAVEVDVDALCD 776

Query: 867  SCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNC 926
              G VVIGGIMEHIEQAGVHSGDSAC IP  T+S   LD I  WT +LA  L V GL+N 
Sbjct: 777  KTGMVVIGGIMEHIEQAGVHSGDSACSIPFTTLSEKVLDIIRKWTSQLANSLQVIGLINI 836

Query: 927  QYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPKH 986
            QYA+    +VY+LEANPRASRTVP+VSKA G PLAK A+LV+SGK+L++LG  KE+IP++
Sbjct: 837  QYAVQQE-EVYILEANPRASRTVPYVSKATGRPLAKIASLVISGKTLSELGVHKELIPRY 895

Query: 987  VSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVFL 1046
            V+VKEAVLPF+KF G D LLGPEMRSTGEVMGID  F  AFAKA IA+G  LP++GTVF+
Sbjct: 896  VAVKEAVLPFQKFPGTDTLLGPEMRSTGEVMGIDYDFGKAFAKAAIASGINLPINGTVFI 955

Query: 1047 SLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKG-IAVERVLKMHEGRPHAGDMVA 1105
            S +D  K     IAK    +GFKIV+TSGT   LE  G I VE +LK+HEGRPH  D + 
Sbjct: 956  STSDRDKILTVPIAKDLEKLGFKIVATSGTQKVLENNGIIGVETILKLHEGRPHVIDWIK 1015

Query: 1106 NGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTVTMT 1165
            N +IQ ++ T +G+   Q+D  K+RR  L Y++PVITT++GA A   AIRSL++  + + 
Sbjct: 1016 NKKIQFIINTPNGEE-SQVDAQKIRRTALDYQLPVITTIAGAKATVTAIRSLQNQPLNVQ 1074

Query: 1166 ALQDFF 1171
            ALQD+ 
Sbjct: 1075 ALQDYI 1080


>gi|302853472|ref|XP_002958251.1| hypothetical protein VOLCADRAFT_77870 [Volvox carteri f. nagariensis]
 gi|300256439|gb|EFJ40705.1| hypothetical protein VOLCADRAFT_77870 [Volvox carteri f. nagariensis]
          Length = 1176

 Score = 1473 bits (3813), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 728/1114 (65%), Positives = 889/1114 (79%), Gaps = 12/1114 (1%)

Query: 60   RVRASSAKIDSSAELSNGAASSKDQKLGKRTDLRKILILGAGPIVIGQACEFDYSGTQAC 119
            RV ASS    ++  L   AA S+   + KR D+  I+I+GAGPIVIGQACEFDYSGTQAC
Sbjct: 60   RVSASST---TATPLPWQAAMSE---IKKRRDINTIMIIGAGPIVIGQACEFDYSGTQAC 113

Query: 120  KALKEEGYEVILINSNPATIMTDPGLADRTYITPMTPELVEQVLEKERPDALLPTMGGQT 179
            K+LK+EGY VIL+NSNPATIMTDPG+ADRTY+ PMTPEL EQ+L KERPDA+LPTMGGQT
Sbjct: 114  KSLKKEGYRVILLNSNPATIMTDPGMADRTYVGPMTPELAEQILAKERPDAILPTMGGQT 173

Query: 180  ALNLAVALAESGALEKYGVELIGAKLDAIKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDE 239
             LNLA  LAE G L KYG+ELIGAKL +I +AEDR+LFKQ+M  IG+K   S    TL+E
Sbjct: 174  GLNLAKTLAERGILAKYGIELIGAKLPSIDRAEDRELFKQSMTRIGLKCAKSATATTLEE 233

Query: 240  CISIANEIGEFPLIIRPAFTLGGTGGGIAYNKEEFEAICKAGLAASLTSQVLVEKSLLGW 299
             ++IA +IG++P+I+RPAFTLGGTGGGIAYN +E + I   GL AS+TSQVLVE+SLLGW
Sbjct: 234  ALTIAADIGKYPIIVRPAFTLGGTGGGIAYNIDELKEIVTGGLTASMTSQVLVEQSLLGW 293

Query: 300  KEYELEVMRDLADNVVIICSIENVDPMGVHTGDSITVAPAQTLTDKEYQRLRDYSIAIIR 359
            KE+ELEVMRDL DN +I+CSIENVDPMGVHTGDSITVAP+QTLTDKE QRLRD +IAIIR
Sbjct: 294  KEFELEVMRDLNDNCMIVCSIENVDPMGVHTGDSITVAPSQTLTDKELQRLRDAAIAIIR 353

Query: 360  EIGVECGGSNVQFAVNPVDGEVMVIEMNPRVSRSSALASKATGFPIAKMAAKLSVGYSLD 419
            E+GVECGGSNVQ AVNP DGE+++IEMNPRVSRSSALASKATGFPIAKMAAKL+VGY+LD
Sbjct: 354  EMGVECGGSNVQMAVNPEDGEMVIIEMNPRVSRSSALASKATGFPIAKMAAKLAVGYTLD 413

Query: 420  QIPNDITKKTPASFEPSIDYVVTKIPRFAFEKFPGSEPLLTTQMKSVGEAMALGRTFQES 479
            QI NDIT KTPASFEPSIDYVVTK+PRFAFEKFPGS+  LTT MKSVGE MA+GRT+QES
Sbjct: 414  QIANDITLKTPASFEPSIDYVVTKVPRFAFEKFPGSKAELTTMMKSVGEVMAIGRTWQES 473

Query: 480  FQKALRSLECGFSGWGC-SNVKELDWDWEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIH 538
             QKALR +E G  GW    N K L  D  QL Y LRVPNPDR+  ++ AM++G+   ++ 
Sbjct: 474  LQKALRGMETGLDGWALPKNYKRLPRD--QLMYKLRVPNPDRIVIMFQAMEEGLTDADLF 531

Query: 539  ELSFIDKWFLTQFKELIDVEQFLLTQSVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEV 598
            EL+ ID W+L Q +EL +V ++L ++ ++ +T ++   +K++GFSD QIA  T S   +V
Sbjct: 532  ELTKIDPWWLAQMRELFNVSKWLKSKKLTELTAEEMAWLKQKGFSDSQIARYTGSAMMDV 591

Query: 599  REKRLSLGVIPSYKRVDTCAAEFEANTPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQ 658
            R  R SLGV PSYKRVDTCAAEFEANTPYMYS+YD   E  PT  +KVLILGGGPNRIGQ
Sbjct: 592  RSYRKSLGVEPSYKRVDTCAAEFEANTPYMYSTYDGNSECVPTTARKVLILGGGPNRIGQ 651

Query: 659  GIEFDYCCCHTSFSLQSAGYETIMMNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLER 718
            GIEFDYCCCH SFSL+  GYETIMMN NPETVSTDYDTS RLYFEP+TVEDVLNVI+ ER
Sbjct: 652  GIEFDYCCCHASFSLRKQGYETIMMNCNPETVSTDYDTSTRLYFEPITVEDVLNVIEAER 711

Query: 719  PEGIIVQFGGQTPLKLSLPIHQYLDEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAI 778
            PEG+IVQFGGQTPLK+++ + + L  + +P+ASG+G V +WGTSP+SID AEDR+R+  +
Sbjct: 712  PEGVIVQFGGQTPLKIAMDLDKALKANPIPAASGNGNVCVWGTSPESIDIAEDRDRWMEL 771

Query: 779  IKELSIEQPKGGIAKSEADALAIAKEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENA 838
            + +L+I QP GG A+SE +A   A ++GYPV++RPSYVLGGRAMEI+Y++E L  Y+  A
Sbjct: 772  LTKLNIRQPAGGSARSEEEAFEKASKLGYPVMIRPSYVLGGRAMEILYSNEDLKRYVTFA 831

Query: 839  VEVDPERPVLIDKYLSDAIEIDVDALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKT 898
            VEVDPERPVLIDKYL  A+E+DVDAL D  GNVVI GIMEHIEQAG+HSGDSAC +PT+T
Sbjct: 832  VEVDPERPVLIDKYLDRAVELDVDALCDKDGNVVIAGIMEHIEQAGIHSGDSACSLPTQT 891

Query: 899  ISSSCLDTISSWTIKLAKRLNVCGLMNCQYAITTSGDV-YLLEANPRASRTVPFVSKAIG 957
            I    LD I SWTI +AK LNV GL+N Q+A+    DV Y++EANPRASRTVPFV+KA+G
Sbjct: 892  IPPKVLDEIRSWTISVAKALNVVGLINIQFAV--QDDVPYIIEANPRASRTVPFVAKAVG 949

Query: 958  HPLAKYAALVMSGKSLNDLGFTKEVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVM 1017
            HP+AKYA+L+MSGK+L D+GFT+E IP HV+VKE VLPF KF G D LLGPEMRSTGEVM
Sbjct: 950  HPIAKYASLLMSGKTLADIGFTEEPIPPHVAVKEVVLPFNKFPGADTLLGPEMRSTGEVM 1009

Query: 1018 GIDMSFPIAFAKAQIAAGQKLPLSGTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTA 1077
            GID  F  AFAKAQIAAGQ+LP +G VF+S+ D  KP +  +A+   ++GF +V+T+GTA
Sbjct: 1010 GIDKEFSAAFAKAQIAAGQRLPKTGKVFISMADKYKPDIIAVARDLGNLGFGLVATTGTA 1069

Query: 1078 HFLELKGIAVERVLKMHEGRPHAGDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYK 1137
              L   G+  E+V K+ EGRP+  D++ NG++ ++++TSSGD  D  DG +LRR  L+  
Sbjct: 1070 MALRAAGVPCEQVFKIQEGRPNPSDLMKNGEVSLVMMTSSGDEADLRDGKELRRLALSLS 1129

Query: 1138 VPVITTVSGALANAEAIRSLKSNTVTMTALQDFF 1171
            +P +TTV+GA A   A+R++++  +    LQDFF
Sbjct: 1130 IPTVTTVAGARATTAALRAMRAGPLVQIPLQDFF 1163


>gi|86606404|ref|YP_475167.1| carbamoyl phosphate synthase large subunit [Synechococcus sp.
            JA-3-3Ab]
 gi|86554946|gb|ABC99904.1| carbamoyl-phosphate synthase, large subunit [Synechococcus sp.
            JA-3-3Ab]
          Length = 1074

 Score = 1464 bits (3791), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 716/1083 (66%), Positives = 877/1083 (80%), Gaps = 17/1083 (1%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            +RTD+ KIL++GAGPIVIGQACEFDYSGTQACKAL+EEGYEVIL+NSNPATIMTDP +AD
Sbjct: 3    RRTDIHKILLIGAGPIVIGQACEFDYSGTQACKALREEGYEVILVNSNPATIMTDPSMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
            R YI P+T + V Q++E+ERPDALLPTMGGQTALN+AV LA  G L++YGVELIGAK +A
Sbjct: 63   RVYIEPVTADFVAQIIERERPDALLPTMGGQTALNVAVELARRGILDQYGVELIGAKREA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I+KAEDR+LFKQAM+ +G+  P SG+  +L E   IA+EIG +PLIIRPA+TLGGTGGG+
Sbjct: 123  IEKAEDRELFKQAMQRLGLAVPRSGLARSLAEAKQIAHEIG-YPLIIRPAYTLGGTGGGV 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEFE IC AGL AS  SQ+LVE+S++GWKE+ELEVMRDLADNVVIICSIEN+DPMG
Sbjct: 182  AYNQEEFEEICAAGLEASPVSQILVEESVIGWKEFELEVMRDLADNVVIICSIENIDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQRLRDY+IAI+REIGVE GGSNVQFAVNP +GEV VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQRLRDYAIAIMREIGVETGGSNVQFAVNPANGEVRVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRF 447
            PRVSRSSALASKATGFPIAK+AAKL+VGY+L ++PNDIT+KTPASFEP++DYVVTKIPRF
Sbjct: 302  PRVSRSSALASKATGFPIAKIAAKLAVGYTLPELPNDITRKTPASFEPTLDYVVTKIPRF 361

Query: 448  AFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDWE 507
            AFEKFPGSEP+LTTQMKSVGEAMA+GRTFQES QKA RSLE    G+G S+  E+    E
Sbjct: 362  AFEKFPGSEPVLTTQMKSVGEAMAIGRTFQESIQKAWRSLEIDRPGFG-SDRPEVFPTPE 420

Query: 508  QLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSVS 567
            +++ +LR PNP R+  I  A+  G  V EI +L+ ID WF+ + KEL++VEQ L  + + 
Sbjct: 421  EVRANLRTPNPFRLLTIRTALLMGFSVQEIAQLTHIDPWFIDKLKELVEVEQALKGRELG 480

Query: 568  NMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTPY 627
            ++T +D   +K+ GFSD+QIA  T  TE +VR++R +LGVIP+YK VDTCAAEFEA TPY
Sbjct: 481  SLTAEDLRHLKQMGFSDRQIAHLTGCTEAQVRDRRKALGVIPTYKTVDTCAAEFEAATPY 540

Query: 628  MYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSNP 687
             YS+Y+ E E+ PT K KV+ILGGGPNRIGQGIEFDYCCCH  F+L+  GYETIM+NSNP
Sbjct: 541  QYSTYESESETFPTAKPKVMILGGGPNRIGQGIEFDYCCCHAVFALRRLGYETIMVNSNP 600

Query: 688  ETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHRL 747
            ETVSTDYDT+DRLYFEPLT E+V+N+++ E+P G+I+QFGGQTPLKL+            
Sbjct: 601  ETVSTDYDTADRLYFEPLTYEEVMNLVEAEQPLGLILQFGGQTPLKLA------------ 648

Query: 748  PSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEIGY 807
                      IWG +PDSID AEDR RF  +++EL I QP  G+A+S  ++L IA+ IGY
Sbjct: 649  -QGLAAAQAPIWGAAPDSIDIAEDRGRFGRLLEELGIRQPAHGLARSVEESLEIARRIGY 707

Query: 808  PVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALADS 867
            PVVVRPSYVLGGRAMEIVY+D+ L  Y++ AV VDP RPVL+D++L DA+E+DVDA+AD 
Sbjct: 708  PVVVRPSYVLGGRAMEIVYSDQDLRRYMQLAVAVDPNRPVLVDQFLEDAVEVDVDAIADH 767

Query: 868  CGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNCQ 927
             G V IGGI+EHIEQAG+HSGDSAC++P++T+S + L  I  WT+KLA+ L V GL+N Q
Sbjct: 768  TGAVTIGGILEHIEQAGIHSGDSACVLPSRTLSPAVLQVIRDWTVKLAQALQVVGLINVQ 827

Query: 928  YAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPKHV 987
            YA+     VY+LEANPRASRTVPFVSKAIGHPLA YAA VMSGK+L +LGFT+EVIP +V
Sbjct: 828  YAVQKE-QVYVLEANPRASRTVPFVSKAIGHPLAGYAAQVMSGKTLAELGFTQEVIPPYV 886

Query: 988  SVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVFLS 1047
            +VKE VLPF KF G D LLGPEMRSTGEVMGID  F  AFAKAQ+AAGQ LPL GTVF+S
Sbjct: 887  AVKEVVLPFHKFPGTDTLLGPEMRSTGEVMGIDTDFGRAFAKAQLAAGQNLPLGGTVFIS 946

Query: 1048 LNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVANG 1107
            ++D  K  +  +A+  + +GF++++T+GT   L   GI VE+VLK+HEGRPH  D + NG
Sbjct: 947  VSDRDKQAVIPVAQELVRLGFRLLATAGTQKVLAEHGIPVEKVLKLHEGRPHVIDTIKNG 1006

Query: 1108 QIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTVTMTAL 1167
            QIQ++V T SG    Q D  K+RR  LAYK+P++TT++GA A A AIR+L+S ++ + +L
Sbjct: 1007 QIQLIVNTPSGGEAQQ-DAQKIRRTALAYKIPLVTTLAGAKATAAAIRALQSGSLGVKSL 1065

Query: 1168 QDF 1170
            Q+F
Sbjct: 1066 QEF 1068


>gi|37521338|ref|NP_924715.1| carbamoyl phosphate synthase large subunit [Gloeobacter violaceus PCC
            7421]
 gi|35212335|dbj|BAC89710.1| carbamoyl phosphate synthetase large chain [Gloeobacter violaceus PCC
            7421]
          Length = 1083

 Score = 1460 bits (3780), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 712/1095 (65%), Positives = 868/1095 (79%), Gaps = 18/1095 (1%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            +RTD+ KIL++GAGPIVIGQACEFDYSGTQACKAL+EEGYE++L+NSNPATIMTDP  AD
Sbjct: 3    RRTDIHKILLIGAGPIVIGQACEFDYSGTQACKALREEGYEIVLVNSNPATIMTDPATAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
            RTYI P+T E VE+++E+ERPDALLPTMGGQTALN+ V LAESG L++YGVELIGAKL A
Sbjct: 63   RTYIEPVTAEFVERIIERERPDALLPTMGGQTALNVTVELAESGVLDRYGVELIGAKLPA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            IKKAEDR+LFKQAM+ IG+  P SG  +TL+E   +A EIG FPLI+RP+FTLGGTGGGI
Sbjct: 123  IKKAEDRELFKQAMEKIGLAVPRSGFAHTLEEARVVAEEIGSFPLILRPSFTLGGTGGGI 182

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEFE + + GL AS TSQVLVE+S LGWKEYELEVMRDLADNVVIICSIEN DPMG
Sbjct: 183  AYNREEFERMIRVGLDASPTSQVLVEESALGWKEYELEVMRDLADNVVIICSIENFDPMG 242

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQRLRD +I +IREIGVE GGSN+QFAV+P +G V+VIEMN
Sbjct: 243  VHTGDSITVAPAQTLTDKEYQRLRDAAIKVIREIGVETGGSNIQFAVHPENGRVIVIEMN 302

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRF 447
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD+I N+IT+KTPASFEP+IDYVVTKIPR+
Sbjct: 303  PRVSRSSALASKATGFPIAKIAAKLAVGYTLDEITNEITQKTPASFEPTIDYVVTKIPRW 362

Query: 448  AFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDWE 507
            AFEKFPG+EP+LTT M+SVGE MA+GRTF ES QKALRSLE    G+G    +E+  D E
Sbjct: 363  AFEKFPGTEPVLTTAMRSVGEVMAIGRTFCESLQKALRSLEIKRFGFGADRSEEIP-DAE 421

Query: 508  QLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSVS 567
             LK  LR   PDR+  I  A+  G  V+++HEL+ ID WFL +  EL+  E+    + ++
Sbjct: 422  TLKSQLRTATPDRIFQIRQALMAGFSVEQVHELTAIDPWFLDKLAELVAFERAYQGRDLA 481

Query: 568  NMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTPY 627
            ++T  ++ E K++G+SD Q+AF T + E+ VR  R  LGV P +K VDTCAAEFEA TPY
Sbjct: 482  SLTAAEWLEAKQKGYSDMQLAFLTGTDEQSVRSTRQELGVTPVFKTVDTCAAEFEAFTPY 541

Query: 628  MYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSNP 687
             YS+Y  E E A  +K K +ILGGGPNRIGQGIEFDYCCCH  F+L   G+ETIM+NSNP
Sbjct: 542  HYSTYASESEIASGEKPKAMILGGGPNRIGQGIEFDYCCCHACFALSEDGFETIMVNSNP 601

Query: 688  ETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHRL 747
            ETVSTDYDTSDRLYFEPLT EDVLN+++ E+P G+IVQFGGQTPL L++P+ +       
Sbjct: 602  ETVSTDYDTSDRLYFEPLTREDVLNIVEAEKPVGVIVQFGGQTPLNLAVPLEK------- 654

Query: 748  PSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEIGY 807
                    V IWGTSPDSID AEDRERF  + ++L I QP  G+A+S ADA+A+A  IGY
Sbjct: 655  ------AGVPIWGTSPDSIDIAEDRERFEQLCQQLGIRQPANGMARSTADAVAVAGRIGY 708

Query: 808  PVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALADS 867
            PVVVRPSYVLGGRAMEIVYTDE L  Y+ +AV+V+P+RP+LIDK+L DA+E+DVDA+ D 
Sbjct: 709  PVVVRPSYVLGGRAMEIVYTDEGLGRYMAHAVQVEPDRPILIDKFLEDAVEVDVDAICDR 768

Query: 868  CGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNCQ 927
             G VVIGGIMEHIEQAG+HSGDSAC++PT+T+  S L  I  WT+KLA+ L V GLMN Q
Sbjct: 769  TGQVVIGGIMEHIEQAGIHSGDSACVLPTRTLDESVLAVIRDWTVKLARALKVVGLMNIQ 828

Query: 928  YAITT---SGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIP 984
            YA+       +VY+LEANPRASRTVPFV+KA G PLAK AA VM+G++L +LGFT+EVIP
Sbjct: 829  YAVKAHREGAEVYVLEANPRASRTVPFVAKATGVPLAKIAARVMAGRTLEELGFTEEVIP 888

Query: 985  KHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTV 1044
             H++VKEAVLPFEKF G D +LGPEMRSTGEVMGID  F  AFAKAQI AGQKLP +GT+
Sbjct: 889  GHIAVKEAVLPFEKFAGTDTILGPEMRSTGEVMGIDTDFGRAFAKAQIGAGQKLPTAGTL 948

Query: 1045 FLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMV 1104
            F+S+ D  K  +  I +  LD+GF++++T GT  FL+ +G+AVE+VLK+HEGRPH GD++
Sbjct: 949  FVSVTDRDKHAVVPIVQQMLDLGFRVIATEGTQRFLQEQGLAVEKVLKIHEGRPHIGDLL 1008

Query: 1105 ANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTVTM 1164
             N +IQ++  T SG S  Q D   +RR  LA K+PVITT++ A A   AI +L+   + +
Sbjct: 1009 KNRRIQLVFNTPSG-SEAQTDAQVIRRTALAQKIPVITTLAAARAVTAAIAALQKGPLEV 1067

Query: 1165 TALQDFFDVETASGS 1179
             +LQ++      +GS
Sbjct: 1068 KSLQEYHQPSLTAGS 1082


>gi|428207687|ref|YP_007092040.1| carbamoyl-phosphate synthase large subunit [Chroococcidiopsis
            thermalis PCC 7203]
 gi|428009608|gb|AFY88171.1| carbamoyl-phosphate synthase large subunit [Chroococcidiopsis
            thermalis PCC 7203]
          Length = 1123

 Score = 1457 bits (3771), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 718/1119 (64%), Positives = 890/1119 (79%), Gaps = 31/1119 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            +R+D++KIL+LGAGPIVIGQACEFDYSGTQACKAL+EEGYEVIL+NSNPATIMTDP  A 
Sbjct: 3    RRSDIKKILLLGAGPIVIGQACEFDYSGTQACKALREEGYEVILVNSNPATIMTDPETAQ 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
            RTYI P+TPELV QV+E ERPDALLPTMGGQTALNLAV+LA++G LEKYGV+LIGA L A
Sbjct: 63   RTYIEPLTPELVTQVIESERPDALLPTMGGQTALNLAVSLAKNGTLEKYGVQLIGANLAA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I+KAEDR  F +AM  IGV   PSGI + L+E  ++A EIG +PLI+RPAFTLGGTGGGI
Sbjct: 123  IEKAEDRQQFNEAMAKIGVAVCPSGIASNLEEAKNVAQEIGSYPLIVRPAFTLGGTGGGI 182

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEF  +  +GL AS  SQ+L++KSL+GWKEYELEVMRD ADNVVIICSIEN+DPMG
Sbjct: 183  AYNQEEFLELATSGLDASPVSQILIDKSLIGWKEYELEVMRDCADNVVIICSIENIDPMG 242

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            +HTGDSITVAPAQTLTDKEYQRLRDYS+ IIREIGVE GGSN+QFA+NP +G+V+ IEMN
Sbjct: 243  IHTGDSITVAPAQTLTDKEYQRLRDYSVRIIREIGVETGGSNIQFAINPTNGDVVAIEMN 302

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRF 447
            PRVSRSSALASKATGF IAK+AAKL++GY+LD+I NDITKKTPASFEP+IDYVVTKIPRF
Sbjct: 303  PRVSRSSALASKATGFAIAKIAAKLAIGYTLDEIANDITKKTPASFEPTIDYVVTKIPRF 362

Query: 448  AFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDWE 507
            AFEKFPGS+  LTTQMKSVGEAMA+GRTF ESFQKALRSLE G SGWGC   ++L    E
Sbjct: 363  AFEKFPGSDSTLTTQMKSVGEAMAIGRTFNESFQKALRSLETGRSGWGCDKQEKLP-SLE 421

Query: 508  QLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSVS 567
            Q++ +LR PNP+R+ A+  AM  GM  +EI+EL+ ID WFL  F++L++ E+ L    + 
Sbjct: 422  QIRANLRTPNPERIFAVRQAMLLGMGNEEIYELTGIDPWFLDSFQQLLETEKLLKRTPLE 481

Query: 568  NMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTPY 627
            ++     Y +K++GFSDKQIAFATK++E  VR+ R SLG++P YK VDTCAAEFEA TPY
Sbjct: 482  SLDGKQLYAIKQQGFSDKQIAFATKTSEDRVRQYRQSLGIVPVYKTVDTCAAEFEALTPY 541

Query: 628  MYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSNP 687
             YSSYD E E  P+ + KV+ILGGGPNRIGQGIEFDYCCCH +++L+ AGYETIM+NSNP
Sbjct: 542  HYSSYDGETEVRPSDRPKVMILGGGPNRIGQGIEFDYCCCHAAYALKGAGYETIMVNSNP 601

Query: 688  ETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLD---- 743
            ETVSTDYDTSDRLYFEPLT+EDV+N+I++E+P GIIVQFGGQTPLKL+LP+ QYL     
Sbjct: 602  ETVSTDYDTSDRLYFEPLTLEDVINIIEVEKPLGIIVQFGGQTPLKLALPLQQYLQGAGK 661

Query: 744  --------------EHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKG 789
                           ++LP+       +IWGTSP+ ID AEDRE+F  I+  L+I QP  
Sbjct: 662  KRAEGAEGAEGATTNYQLPT------TKIWGTSPEDIDTAEDREKFEKILHSLNIAQPPN 715

Query: 790  GIAKSEADALAIAKEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLI 849
            GIA+S  DAL +A++IGYPVVVRPSYVLGGRAMEIVY+D  L  Y+  AV+V+PE P+LI
Sbjct: 716  GIARSYEDALVVAQKIGYPVVVRPSYVLGGRAMEIVYSDTELERYMTFAVQVEPEHPILI 775

Query: 850  DKYLSDAIEIDVDALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISS 909
            DK+L +AIE+DVDA+AD+ G VVIGG+MEHIEQAG+HSGDSAC +P  ++ +  L+ I +
Sbjct: 776  DKFLENAIEVDVDAIADTTGKVVIGGVMEHIEQAGIHSGDSACTLPAISLPTPVLEKIRT 835

Query: 910  WTIKLAKRLNVCGLMNCQYAI----TTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAA 965
             TI+LAK L V GLMN Q+A+    T +  VY+LEANPRASRTVPFVSKA G PLAK A+
Sbjct: 836  QTIQLAKALKVVGLMNIQFAVVGAHTYNPQVYILEANPRASRTVPFVSKATGVPLAKLAS 895

Query: 966  LVMSGKSLNDLGFTKEVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPI 1025
            LVM+G++L  LG ++E    H++VKEAVLPF+KF G D LLGPEMRSTGEVMGID  F +
Sbjct: 896  LVMAGQNLAQLGLSEEPKLNHIAVKEAVLPFKKFPGTDTLLGPEMRSTGEVMGIDRDFGL 955

Query: 1026 AFAKAQIAAGQKLPLSGTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGI 1085
            A+AKA++ AG+ LPL GTVF++ N+  KP +  + +  +++GF +++T GT   L+  G+
Sbjct: 956  AYAKAELGAGEVLPLEGTVFVTCNERDKPLVVPVVRDLIELGFDVIATDGTRRVLQEHGL 1015

Query: 1086 AVERVLKMHEGRPHAGDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVS 1145
             V  +LK+HEGRPH  D + N  IQ+++ T SG+   Q D   +RR  L YK+P+ITT++
Sbjct: 1016 KVGLILKLHEGRPHVLDAIKNHNIQLIINTPSGEEA-QTDAKLIRRSALTYKIPIITTIA 1074

Query: 1146 GALANAEAIRSLKSNTVTMTALQDFFDVETASGSSENLQ 1184
            GA A A AIR+LKS ++T+ A+QD +  E + G+++N Q
Sbjct: 1075 GARATAAAIRALKSQSLTVKAIQD-YTAEASQGAAQNKQ 1112


>gi|87303373|ref|ZP_01086161.1| carbamoyl-phosphate synthase, large subunit [Synechococcus sp. WH
            5701]
 gi|87282021|gb|EAQ73983.1| carbamoyl-phosphate synthase, large subunit [Synechococcus sp. WH
            5701]
          Length = 1101

 Score = 1420 bits (3675), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 696/1103 (63%), Positives = 864/1103 (78%), Gaps = 30/1103 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            +R+DLR+IL+LG+GPIVIGQACEFDYSGTQACKAL++EGYEV+L+NSNPA+IMTDP +AD
Sbjct: 3    RRSDLRRILLLGSGPIVIGQACEFDYSGTQACKALRDEGYEVVLVNSNPASIMTDPEMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
            RTYI P+TP++V QV+E ERPDALLPTMGGQTALNLAVALAE G LE++GVELIGA L A
Sbjct: 63   RTYIEPLTPDVVRQVIELERPDALLPTMGGQTALNLAVALAEDGTLERFGVELIGANLQA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I+KAEDR LFK+AM+ IGV   PSGI ++L+E   +  EIG +P IIRPAFTLGG+GGGI
Sbjct: 123  IQKAEDRRLFKEAMERIGVAVCPSGIASSLEEAERVGEEIGTYPRIIRPAFTLGGSGGGI 182

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN EEF+A CK+GL AS  SQ+L+E+SL+GWKE+ELEVMRDLADNVVIICSIEN+DPMG
Sbjct: 183  AYNPEEFQAFCKSGLEASPVSQILIEQSLIGWKEFELEVMRDLADNVVIICSIENLDPMG 242

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTD+EYQRLRD SIAIIREIGVE GGSN+QFA+NP +G+V+VIEMN
Sbjct: 243  VHTGDSITVAPAQTLTDREYQRLRDQSIAIIREIGVETGGSNIQFAINPANGDVVVIEMN 302

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRF 447
            PRVSRSSALASKATGFPIAK+AA+L+VGY+LD+I NDIT  TPA FEP+IDYVVTKIPRF
Sbjct: 303  PRVSRSSALASKATGFPIAKIAARLAVGYTLDEILNDITGATPACFEPTIDYVVTKIPRF 362

Query: 448  AFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDWE 507
            AFEKF GS  +LTT MKSVGEAMA+GR F+ESFQKALRSLE G +GWGC    +   +  
Sbjct: 363  AFEKFQGSPAVLTTSMKSVGEAMAIGRCFEESFQKALRSLETGHAGWGCDR-PDKPLEPS 421

Query: 508  QLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLT-QSV 566
             L+  LR P+PDR+ A+ AAM  G   +EIH+LS ID WFL + + LI+ E+ LL  +++
Sbjct: 422  DLERMLRTPSPDRIFAVRAAMVAGRSDEEIHQLSAIDPWFLAKLRRLIEAEERLLRGRTL 481

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
              ++  D  E+K+ GFSD+QIA+ + S E  VR  R  LGV   +K VDTCAAEF + TP
Sbjct: 482  EQLSAADLLELKQLGFSDRQIAWTSGSDELSVRRTRQGLGVNAVFKTVDTCAAEFASTTP 541

Query: 627  YMYSSYDF----------------ECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTS 670
            Y YS+Y+                 E E  P  ++KV+ILGGGPNRIGQGIEFDYCCCH S
Sbjct: 542  YHYSTYERPLERLDNAGRAIRLAQEDEVRPESRRKVMILGGGPNRIGQGIEFDYCCCHAS 601

Query: 671  FSLQSAGYETIMMNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQT 730
            F+L++ G+ T+M+NSNPETVSTDYDTSDRLYFEPLT+EDVLNVI+ E+PEG+IVQFGGQT
Sbjct: 602  FALRADGFATVMVNSNPETVSTDYDTSDRLYFEPLTLEDVLNVIEAEKPEGVIVQFGGQT 661

Query: 731  PLKLSLPIHQYLDEHRLPSASGDGLV---RIWGTSPDSIDAAEDRERFNAIIKELSIEQP 787
            PLKL+LP+ ++L       A  +G V   R+WGTSP+SID AEDRE+F AI+++L+I QP
Sbjct: 662  PLKLALPLLRWL-------AGPEGQVTGTRLWGTSPESIDQAEDREQFEAILRQLNIRQP 714

Query: 788  KGGIAKSEADALAIAKEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPV 847
            + G+A+SEA+A A+A  +GYPVVVRPSYVLGGRAME+V+ +  L  Y+  AV+V+P+ PV
Sbjct: 715  RNGLARSEAEARAVADRVGYPVVVRPSYVLGGRAMEVVFDEAELNRYMVEAVQVEPDHPV 774

Query: 848  LIDKYLSDAIEIDVDALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTI 907
            LID+YL +AIE+DVDALAD  G VVIGG+MEHIE AG+HSGDSAC +P  ++S   L TI
Sbjct: 775  LIDQYLENAIEVDVDALADRQGMVVIGGLMEHIEPAGIHSGDSACALPAVSLSQQALATI 834

Query: 908  SSWTIKLAKRLNVCGLMNCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALV 967
              WT  LA  L+V GL+N Q+A+     V+++EANPRASRTVPFV+KA G PLAK A+L+
Sbjct: 835  RQWTEALALALDVSGLINLQFAVQAE-RVFIIEANPRASRTVPFVAKATGVPLAKIASLL 893

Query: 968  MSGKSLNDLGFTKEVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAF 1027
            M+G SL++LG   E  P   +VKEAVLPF++F G D LLGPEMRSTGEVMG   SF +A+
Sbjct: 894  MAGHSLSELGLISEPKPPLQNVKEAVLPFKRFPGSDTLLGPEMRSTGEVMGSGASFGMAY 953

Query: 1028 AKAQIAAGQKLPLSGTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAV 1087
            AKA+IAAG+ LP+SGTVFLS +D  KP L  +A+   ++G  +++T+GTA  L   G+ V
Sbjct: 954  AKAEIAAGEALPISGTVFLSTHDRDKPSLVPVAERLSELGLALIATTGTAAVLREAGLEV 1013

Query: 1088 ERVLKMHEGRPHAGDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGA 1147
            E +LK+HEGRP+  D + +G+IQ++V T  G      D   LRR  L Y VP +TT++GA
Sbjct: 1014 ESILKVHEGRPNIEDAIRSGRIQLIVNTPIGRQATH-DDKYLRRAALDYAVPTVTTLAGA 1072

Query: 1148 LANAEAIRSLKSNTVTMTALQDF 1170
             A  EAI +L+S  +T+ ALQD 
Sbjct: 1073 RAAVEAIATLQSQELTVAALQDI 1095


>gi|443658118|ref|ZP_21132045.1| carbamoyl-phosphate synthase, large subunit [Microcystis aeruginosa
            DIANCHI905]
 gi|443333058|gb|ELS47636.1| carbamoyl-phosphate synthase, large subunit [Microcystis aeruginosa
            DIANCHI905]
          Length = 1027

 Score = 1415 bits (3662), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 685/1034 (66%), Positives = 837/1034 (80%), Gaps = 10/1034 (0%)

Query: 140  MTDPGLADRTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVE 199
            MTDP +ADRTYI P+ PE+VE+++EKERPDA+LPTMGGQTALN AVALA+SG LEKY VE
Sbjct: 1    MTDPEMADRTYIEPILPEIVEKIIEKERPDAILPTMGGQTALNTAVALAKSGVLEKYNVE 60

Query: 200  LIGAKLDAIKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFT 259
            LIGAKL AI+KAEDR+LFK+AM+ IGV   PSGI N L+E  +I ++IG +PLIIRPAFT
Sbjct: 61   LIGAKLPAIEKAEDRELFKKAMEKIGVPVCPSGIANNLEEAKAIGHQIGSYPLIIRPAFT 120

Query: 260  LGGTGGGIAYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICS 319
            LGGTGGGIAYN+EEFE + + GL  S TSQ+LVEKSL+GWKEYELEVMRDLADNVVIICS
Sbjct: 121  LGGTGGGIAYNQEEFEPMAQYGLDCSPTSQILVEKSLIGWKEYELEVMRDLADNVVIICS 180

Query: 320  IENVDPMGVHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDG 379
            IEN D MGVHTGDSITVAPAQTLTDKEYQRLRDYS AIIREIGVE GGSN+QF+VNP +G
Sbjct: 181  IENFDAMGVHTGDSITVAPAQTLTDKEYQRLRDYSKAIIREIGVETGGSNIQFSVNPTNG 240

Query: 380  EVMVIEMNPRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDY 439
            +V+VIEMNPRVSRSSALASKATGFPIAK AAKL+VGY+LD+IPNDITKKTPASFEP+IDY
Sbjct: 241  DVIVIEMNPRVSRSSALASKATGFPIAKFAAKLAVGYTLDEIPNDITKKTPASFEPTIDY 300

Query: 440  VVTKIPRFAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNV 499
            VVTKIPRFAFEKFPGS+P+LTTQMKSVGEAMA+GRTFQESFQKALRSLE G  G+GC  +
Sbjct: 301  VVTKIPRFAFEKFPGSQPILTTQMKSVGEAMAIGRTFQESFQKALRSLETGRFGFGCDKI 360

Query: 500  KELDWDWEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQ 559
            + L     +++ SLR PNP+R+ +IY A K GM  +EIHEL+ ID WFL +  +L++ E+
Sbjct: 361  ETLP-PLSEVRASLRTPNPERVYSIYHAFKLGMNGEEIHELTGIDPWFLDKLADLMETEK 419

Query: 560  FLLTQSVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAA 619
            FL    + ++++++ + +K++GFSD+QIAFAT ++E EVR  R  LG++P YK VDTCAA
Sbjct: 420  FLKRTPLKSLSQENLFAIKQQGFSDRQIAFATNTSEDEVRSYRKGLGIVPVYKMVDTCAA 479

Query: 620  EFEANTPYMYSSYD-FECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGY 678
            EFEA TPY YS+Y+  E E  P+ K+KV+ILGGGPNRIGQGIEFDYCCCH +FSL  AG+
Sbjct: 480  EFEALTPYYYSTYEQVESEVLPSDKRKVMILGGGPNRIGQGIEFDYCCCHAAFSLSQAGF 539

Query: 679  ETIMMNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPI 738
            ETIM+NSNPETVSTDYDTSDRLYFEPLT EDVLN+I+ E+PEG+I+QFGGQTPLKL++P+
Sbjct: 540  ETIMVNSNPETVSTDYDTSDRLYFEPLTKEDVLNIIEAEQPEGLIIQFGGQTPLKLAVPL 599

Query: 739  HQYLDEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADA 798
             +YL+    P  +     +IWGTSPDSID AEDRERF  I+++L I QP  GIA+S  ++
Sbjct: 600  QKYLESPNCPVNT-----KIWGTSPDSIDTAEDRERFEQILRQLDIRQPANGIARSFQES 654

Query: 799  LAIAKEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIE 858
             A+AK IGYPVVVRPSYVLGGRAMEIVY+D  L  Y++ AV+++P+ P+LIDK+L +AIE
Sbjct: 655  QAVAKRIGYPVVVRPSYVLGGRAMEIVYSDSELERYMKYAVQIEPDHPILIDKFLENAIE 714

Query: 859  IDVDALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRL 918
            +DVDAL+D+   VVIGG+MEHIEQAGVHSGDSAC IP  ++S+S L TI  WT++LAK L
Sbjct: 715  VDVDALSDATETVVIGGLMEHIEQAGVHSGDSACSIPHTSLSASVLTTIRQWTVELAKAL 774

Query: 919  NVCGLMNCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGF 978
             V GLMN QYA+     VY+LEANPRASRTVP+VSKA G PLAK A+LVMSG++L +LG 
Sbjct: 775  KVIGLMNIQYAVQGE-TVYILEANPRASRTVPYVSKATGVPLAKVASLVMSGRTLTELGI 833

Query: 979  TKEVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKL 1038
              E IP+H++VKEAVLPF+KF G D LLGPEMRSTGEVMGID  F  AFAKA++AAG  L
Sbjct: 834  ISEAIPRHIAVKEAVLPFQKFPGADTLLGPEMRSTGEVMGIDSDFGKAFAKAEMAAGVIL 893

Query: 1039 PLSGTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIA-VERVLKMHEGR 1097
              SGTVF+S++D  K  +  + K    +GF++V+TSGT   L   G   ++ VLK+HEGR
Sbjct: 894  ATSGTVFVSMSDRDKIPMVPVVKDLQSLGFRVVATSGTREVLLENGCENIDLVLKIHEGR 953

Query: 1098 PHAGDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSL 1157
            PH  D + N  IQ +V T SG+   Q DG ++RR  L YK+P+ITT++GA A   A++SL
Sbjct: 954  PHVIDWIKNDWIQFIVNTPSGEE-SQNDGRQIRRTALDYKLPIITTIAGAKATVAALKSL 1012

Query: 1158 KSNTVTMTALQDFF 1171
            +S  + + ALQD+ 
Sbjct: 1013 QSEPLEVKALQDYL 1026



 Score =  237 bits (604), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 139/403 (34%), Positives = 224/403 (55%), Gaps = 28/403 (6%)

Query: 90  TDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLADRT 149
           +D RK++ILG GP  IGQ  EFDY    A  +L + G+E I++NSNP T+ TD   +DR 
Sbjct: 502 SDKRKVMILGGGPNRIGQGIEFDYCCCHAAFSLSQAGFETIMVNSNPETVSTDYDTSDRL 561

Query: 150 YITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKY--------GVELI 201
           Y  P+T E V  ++E E+P+ L+   GGQT L LAV       L+KY          ++ 
Sbjct: 562 YFEPLTKEDVLNIIEAEQPEGLIIQFGGQTPLKLAV------PLQKYLESPNCPVNTKIW 615

Query: 202 GAKLDAIKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLG 261
           G   D+I  AEDR+ F+Q ++ + ++ P +GI  +  E  ++A  IG +P+++RP++ LG
Sbjct: 616 GTSPDSIDTAEDRERFEQILRQLDIRQPANGIARSFQESQAVAKRIG-YPVVVRPSYVLG 674

Query: 262 GTGGGIAYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIE 321
           G    I Y+  E E   K  +       +L++K L    E +++ + D  + VVI   +E
Sbjct: 675 GRAMEIVYSDSELERYMKYAVQIEPDHPILIDKFLENAIEVDVDALSDATETVVIGGLME 734

Query: 322 NVDPMGVHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGE- 380
           +++  GVH+GDS    P  +L+      +R +++ + + + V  G  N+Q+AV    GE 
Sbjct: 735 HIEQAGVHSGDSACSIPHTSLSASVLTTIRQWTVELAKALKV-IGLMNIQYAVQ---GET 790

Query: 381 VMVIEMNPRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYV 440
           V ++E NPR SR+    SKATG P+AK+A+ +  G +L ++   I++  P        ++
Sbjct: 791 VYILEANPRASRTVPYVSKATGVPLAKVASLVMSGRTLTEL-GIISEAIPR-------HI 842

Query: 441 VTKIPRFAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKA 483
             K     F+KFPG++ LL  +M+S GE M +   F ++F KA
Sbjct: 843 AVKEAVLPFQKFPGADTLLGPEMRSTGEVMGIDSDFGKAFAKA 885


>gi|148239765|ref|YP_001225152.1| carbamoyl phosphate synthase large subunit [Synechococcus sp. WH
            7803]
 gi|147848304|emb|CAK23855.1| Carbamoylphosphate synthase large subunit [Synechococcus sp. WH 7803]
          Length = 1107

 Score = 1411 bits (3653), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 689/1103 (62%), Positives = 866/1103 (78%), Gaps = 27/1103 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            +R DL++IL+LG+GPIVIGQACEFDYSGTQACKAL+ EGYEV+L+NSNPA+IMTDP +AD
Sbjct: 3    RRNDLQRILLLGSGPIVIGQACEFDYSGTQACKALRAEGYEVVLVNSNPASIMTDPEMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
            RTY+ P+TPE+V +V+E+ERPDALLPTMGGQTALNLAVALAE+G LE++G+ELIGA L A
Sbjct: 63   RTYVEPLTPEVVTRVIERERPDALLPTMGGQTALNLAVALAENGTLERFGIELIGADLKA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I+KAEDR LFKQAM+ IGVK  PSGI +++DE  ++ + IG FP IIRPAFTLGG+GGGI
Sbjct: 123  IRKAEDRQLFKQAMERIGVKVCPSGIASSMDEAKAVGDSIGSFPRIIRPAFTLGGSGGGI 182

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN EEF+AICK+GL AS  SQ+L+EKSL+GWKE+ELEVMRDLADNVVI+CSIEN+DPMG
Sbjct: 183  AYNPEEFDAICKSGLDASPVSQILIEKSLIGWKEFELEVMRDLADNVVIVCSIENLDPMG 242

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTD+EYQRLRD SIAIIREIGV  GGSN+QFA+NP DGEV+VIEMN
Sbjct: 243  VHTGDSITVAPAQTLTDREYQRLRDQSIAIIREIGVATGGSNIQFAINPADGEVVVIEMN 302

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRF 447
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD+I NDIT KTPA FEP+IDYVVTK+PRF
Sbjct: 303  PRVSRSSALASKATGFPIAKIAAKLAVGYTLDEILNDITGKTPACFEPTIDYVVTKVPRF 362

Query: 448  AFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDWE 507
            AFEKF GS  +LTT MKSVGEAMA+GR+F+ESFQKALRSLE G SGWG  +  E      
Sbjct: 363  AFEKFRGSPAVLTTAMKSVGEAMAIGRSFEESFQKALRSLETGLSGWG-GDRPEPTVQPA 421

Query: 508  QLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLT-QSV 566
            +L+ SLR P+P+R+ ++ AAM  G    EIH LS ID WFL + ++LID E+ LL  + +
Sbjct: 422  ELERSLRTPSPERILSVRAAMIAGRSDTEIHALSNIDPWFLAKLRQLIDAEKRLLHGKRL 481

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
              ++ D   E+K+ GFSD+QIA+ T S E  VR++R SL V+P +K VDTCAAEF ++TP
Sbjct: 482  DQLSGDALLELKQLGFSDRQIAWQTSSDELAVRQRRSSLAVLPVFKTVDTCAAEFASSTP 541

Query: 627  YMYSSY-----------DFECESAPTQ-----KKKVLILGGGPNRIGQGIEFDYCCCHTS 670
            Y YS+Y           D   ++  ++     ++K++ILGGGPNRIGQGIEFDYCCCH S
Sbjct: 542  YHYSTYERPVAQITASGDLTIQAPASEVTSDPRRKLMILGGGPNRIGQGIEFDYCCCHAS 601

Query: 671  FSLQSAGYETIMMNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQT 730
            FS Q+ GY T+M+NSNPETVSTDYD+SDRLYFEPLT EDVLNVI++ERP G+IVQFGGQT
Sbjct: 602  FSAQAQGYCTVMVNSNPETVSTDYDSSDRLYFEPLTFEDVLNVIEVERPAGVIVQFGGQT 661

Query: 731  PLKLSLPIHQYLDEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGG 790
            PLKL+LP+ ++L+    P     G  +IWGT+P+SID AEDRE+F AI+++L I QP+ G
Sbjct: 662  PLKLALPLLRWLN---TPEGQSTG-TQIWGTTPESIDLAEDREQFEAILRQLDIRQPRNG 717

Query: 791  IAKSEADALAIAKEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLID 850
            +A+SE +A  +A+ +GYPVVVRPSYVLGGRAME+VY +  L  Y+  AV+V+P+ PVLID
Sbjct: 718  LARSEEEARTVAETVGYPVVVRPSYVLGGRAMEVVYDEHELNRYMNEAVQVEPDHPVLID 777

Query: 851  KYLSDAIEIDVDALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSW 910
            +YL +AIE+DVDAL D  G VVIGG+MEHIE AG+HSGDSAC +P+ ++ +  L+TI +W
Sbjct: 778  QYLQNAIEVDVDALCDHEGTVVIGGLMEHIEPAGIHSGDSACCLPSVSLGTEALNTIKTW 837

Query: 911  TIKLAKRLNVCGLMNCQYAI----TTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAAL 966
            T  LA RLNV GL+N Q+A+    T +  V+++EANPRASRTVPFV+KA G PLA+ A  
Sbjct: 838  TKALALRLNVRGLINLQFAVQRAETGTEKVFIIEANPRASRTVPFVAKATGVPLARIATR 897

Query: 967  VMSGKSLNDLGFTKEVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIA 1026
            +M+G+SL+ +G   E  P   +VKEAVLPF +F G D LLGPEMRSTGEVMG   +F +A
Sbjct: 898  LMAGESLSRVGVLDEPCPPLQAVKEAVLPFRRFPGADSLLGPEMRSTGEVMGWAPNFGMA 957

Query: 1027 FAKAQIAAGQKLPLSGTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIA 1086
            +AKA+IAAG  LP  GTVFLS +D  KP L  +A+  + +GF++++TSGTA  L   G+ 
Sbjct: 958  YAKAEIAAGDALPTEGTVFLSTHDRDKPALIPVAERLIALGFELIATSGTAQTLAKAGLK 1017

Query: 1087 VERVLKMHEGRPHAGDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSG 1146
            V  VLK+HEGRP+  D + +G +Q+++ T  G      D   LRR  L Y VP +TT++G
Sbjct: 1018 VTPVLKVHEGRPNIEDQIRSGGVQLVINTPIGRQAAH-DDRYLRRAALDYSVPTLTTLAG 1076

Query: 1147 ALANAEAIRSLKSNTVTMTALQD 1169
            A +  E I +L+S+ + + ALQD
Sbjct: 1077 ARSAVEGIEALQSHQLDIHALQD 1099


>gi|88808802|ref|ZP_01124312.1| carbamoyl-phosphate synthase, large subunit [Synechococcus sp. WH
            7805]
 gi|88787790|gb|EAR18947.1| carbamoyl-phosphate synthase, large subunit [Synechococcus sp. WH
            7805]
          Length = 1107

 Score = 1401 bits (3627), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 687/1103 (62%), Positives = 855/1103 (77%), Gaps = 27/1103 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            +R DL +IL+LG+GPIVIGQACEFDYSGTQACKALK EGYEV+L+NSNPA+IMTDP +AD
Sbjct: 3    RRNDLHRILLLGSGPIVIGQACEFDYSGTQACKALKAEGYEVVLVNSNPASIMTDPEMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
            RTY+ P+TPE+V +V+E+ERPDALLPTMGGQTALNLAVALAE G L+++G+ELIGA L A
Sbjct: 63   RTYVEPLTPEVVTRVIERERPDALLPTMGGQTALNLAVALAEDGTLDRFGIELIGADLKA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I+KAEDR LFK+AM+ IGVK  PSGI +++DE   +   IG FP IIRPAFTLGG+GGGI
Sbjct: 123  IRKAEDRQLFKEAMERIGVKVCPSGIASSMDEAKDVGASIGTFPRIIRPAFTLGGSGGGI 182

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN EEF+AICK+GL AS  SQ+L+EKSLLGWKE+ELEVMRDLADNVVI+CSIEN+DPMG
Sbjct: 183  AYNPEEFDAICKSGLDASPVSQILIEKSLLGWKEFELEVMRDLADNVVIVCSIENLDPMG 242

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTD+EYQRLRD SIAIIREIGV  GGSN+QFA+NP DG+V+VIEMN
Sbjct: 243  VHTGDSITVAPAQTLTDREYQRLRDQSIAIIREIGVATGGSNIQFAINPQDGDVVVIEMN 302

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRF 447
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD+I NDIT KTPA FEP+IDYVVTK+PRF
Sbjct: 303  PRVSRSSALASKATGFPIAKIAAKLAVGYTLDEILNDITGKTPACFEPTIDYVVTKVPRF 362

Query: 448  AFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDWE 507
            AFEKF GS  +LTT MKSVGEAMA+GR F+ESFQKALRSLE G SGWG  +  E   +  
Sbjct: 363  AFEKFRGSPAVLTTAMKSVGEAMAIGRCFEESFQKALRSLETGLSGWG-GDRPEPTLEPA 421

Query: 508  QLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLT-QSV 566
            +L+ SLR P+P+R+ ++  AM  G    EIH LS ID WFL + + LID E+ LL  + +
Sbjct: 422  ELERSLRTPSPERILSVRYAMVAGRTDAEIHSLSSIDPWFLAKLRRLIDAEERLLRGKRL 481

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
              ++ D   E+K+ GFSD+QIA+ T S E EVR +R +L + P +K VDTCAAEF ++TP
Sbjct: 482  DQLSSDTMLELKQLGFSDRQIAWQTGSKELEVRARRNTLAIQPVFKTVDTCAAEFASSTP 541

Query: 627  YMYSSYDFECE----------SAPTQ------KKKVLILGGGPNRIGQGIEFDYCCCHTS 670
            Y YS+Y+               APT       ++K++ILGGGPNRIGQGIEFDYCCCH S
Sbjct: 542  YHYSTYERPVGRINIKGDLVFQAPTSEVSTDTRRKLMILGGGPNRIGQGIEFDYCCCHAS 601

Query: 671  FSLQSAGYETIMMNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQT 730
            FS Q+ GY T+M+NSNPETVSTDYD+SDRLYFEPLT EDVLNVI+ ERP G+IVQFGGQT
Sbjct: 602  FSAQNQGYCTVMVNSNPETVSTDYDSSDRLYFEPLTFEDVLNVIEAERPAGVIVQFGGQT 661

Query: 731  PLKLSLPIHQYLDEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGG 790
            PLKL+LP+ ++ +  +  +       +IWGTSP+SID AEDRE+F AI++EL I QP+ G
Sbjct: 662  PLKLALPLLRWFETSQGQTTG----TQIWGTSPESIDLAEDREQFEAILRELEIRQPRNG 717

Query: 791  IAKSEADALAIAKEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLID 850
            +A+S+ +A A+A+ +GYPVVVRPSYVLGGRAME+VY +  L  Y+  AV+V+P+ PVLID
Sbjct: 718  LARSDGEARAVAETVGYPVVVRPSYVLGGRAMEVVYDESELNRYMNEAVQVEPDHPVLID 777

Query: 851  KYLSDAIEIDVDALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSW 910
            +YL +AIE+DVDAL D  G VVIGG+MEHIE AG+HSGDSAC +P+ ++ +  L+TI +W
Sbjct: 778  QYLQNAIEVDVDALCDQEGTVVIGGLMEHIEPAGIHSGDSACCLPSISLGAEALNTIKAW 837

Query: 911  TIKLAKRLNVCGLMNCQYAITTSGD----VYLLEANPRASRTVPFVSKAIGHPLAKYAAL 966
            T  LA RLNV GL+N Q+A+  + +    V+++EANPRASRTVPFV+KA G PLA+ A  
Sbjct: 838  TKALALRLNVRGLINLQFAVQRAENGEERVFIIEANPRASRTVPFVAKATGVPLARIATR 897

Query: 967  VMSGKSLNDLGFTKEVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIA 1026
            VM+G+SL  +G   E  P   +VKEAVLPF +F G D LLGPEMRSTGEVMG    F +A
Sbjct: 898  VMAGESLATIGLLHEPSPPLQAVKEAVLPFRRFPGADSLLGPEMRSTGEVMGWAPDFGMA 957

Query: 1027 FAKAQIAAGQKLPLSGTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIA 1086
            +AKA+IAAG  LP  GTVFLS +D  KP L  +A+  + +GF +++TSGTA  L   G++
Sbjct: 958  YAKAEIAAGDALPTEGTVFLSTHDRDKPALIPVAQRLIALGFDLIATSGTAQTLSAAGLS 1017

Query: 1087 VERVLKMHEGRPHAGDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSG 1146
            V  VLK+HEGRP+  D + +G +Q+++ T  G      D   LRR  L Y VP +TT++G
Sbjct: 1018 VTPVLKVHEGRPNIEDQIRSGGVQLVINTPIGRQAAH-DDRYLRRAALDYSVPTVTTLAG 1076

Query: 1147 ALANAEAIRSLKSNTVTMTALQD 1169
            A +  E I +L+S ++ + ALQD
Sbjct: 1077 ARSAVEGIEALQSKSIEIHALQD 1099


>gi|318041817|ref|ZP_07973773.1| carbamoyl phosphate synthase large subunit [Synechococcus sp. CB0101]
          Length = 1097

 Score = 1400 bits (3625), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 681/1100 (61%), Positives = 850/1100 (77%), Gaps = 24/1100 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            +RTDLR+IL+LG+GPIVIGQACEFDYSGTQACKAL+ EG+EV+L+NSNPA+IMTDP +AD
Sbjct: 3    RRTDLRRILLLGSGPIVIGQACEFDYSGTQACKALRAEGFEVVLVNSNPASIMTDPDMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
            RTYI P+TP++V +V+E+ERPDALLPTMGGQTALNLAV LA+ G LE+YGVELIGA L A
Sbjct: 63   RTYIEPLTPDVVRRVIEQERPDALLPTMGGQTALNLAVTLAKDGTLEQYGVELIGANLQA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I+KAEDRDLFKQAM+ IGV   PSGI  TL+E  ++  +IG +P IIRPAFTLGG+GGGI
Sbjct: 123  IEKAEDRDLFKQAMERIGVAVCPSGIATTLEEAEAVGEQIGSYPRIIRPAFTLGGSGGGI 182

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN EEF AIC +GL AS  +Q+L+E+SLLGWKE+ELEVMRD ADNVVI+CSIEN+DPMG
Sbjct: 183  AYNPEEFRAICLSGLDASPVNQILIEQSLLGWKEFELEVMRDTADNVVIVCSIENLDPMG 242

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTD+EYQRLRD +IAIIREIGV+ GGSN+QFA+NP +G+V+VIEMN
Sbjct: 243  VHTGDSITVAPAQTLTDREYQRLRDQAIAIIREIGVDTGGSNIQFAINPANGDVIVIEMN 302

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRF 447
            PRVSRSSALASKATGFPIAK+AA+L+VGY+LD+I NDIT KTPA FEP+IDYVVTK+PRF
Sbjct: 303  PRVSRSSALASKATGFPIAKIAARLAVGYTLDEILNDITGKTPACFEPTIDYVVTKVPRF 362

Query: 448  AFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDWE 507
            AFEKF GS  +LTT MKSVGEAMA+GR F+ESFQKALRSLE G +GWGC    +   +  
Sbjct: 363  AFEKFRGSPAVLTTAMKSVGEAMAIGRNFEESFQKALRSLETGHAGWGCDR-PDPSPERS 421

Query: 508  QLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQS-V 566
             L  +LR P+PDR+ A+  AM  G    +IH +S ID WFL + + +I+ EQ  L  S +
Sbjct: 422  DLDRTLRTPSPDRIFAVRTAMVNGYSDADIHRISAIDPWFLAKLRRIIEAEQRWLKGSRL 481

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
             ++  +    +K+ GFSD+QIA+AT + E  VR +R  LGV   +K VDTCAAEF + TP
Sbjct: 482  EDLDAEALLALKQLGFSDRQIAWATGAQELAVRNQRQRLGVNAVFKTVDTCAAEFASTTP 541

Query: 627  YMYSSYDF----------------ECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTS 670
            Y Y++Y+                 E E  P  ++KV+ILGGGPNRIGQGIEFDYCC H S
Sbjct: 542  YHYATYERPIERLRDDGSLELIAPESEVQPETRRKVMILGGGPNRIGQGIEFDYCCVHAS 601

Query: 671  FSLQSAGYETIMMNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQT 730
            F+LQ+ G+ T+M+NSNPETVSTDYDTSDRLYFEPLT EDVLNVI+ E+PEG+IVQFGGQT
Sbjct: 602  FALQAEGFATVMVNSNPETVSTDYDTSDRLYFEPLTFEDVLNVIEAEKPEGVIVQFGGQT 661

Query: 731  PLKLSLPIHQYLDEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGG 790
            PLKL++P+ ++L+    P+    G  RIWGTSP+SID AEDRE+F AI+++L I QP+ G
Sbjct: 662  PLKLAIPLLRWLES---PAGQATG-TRIWGTSPESIDTAEDREQFEAILRKLDIRQPRNG 717

Query: 791  IAKSEADALAIAKEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLID 850
            +A+SEA+A  IA+ +GYPVVVRPSYVLGGRAME+V+ +E L  Y+  AV V+P+ PVLID
Sbjct: 718  LARSEAEARVIAERVGYPVVVRPSYVLGGRAMEVVFGEEELNRYMSEAVNVEPDHPVLID 777

Query: 851  KYLSDAIEIDVDALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSW 910
            +YL +A E+DVDAL D+ G VVIGG+MEHIE AGVHSGDSAC +P  ++    L TI  W
Sbjct: 778  QYLENATEVDVDALCDATGRVVIGGLMEHIEPAGVHSGDSACALPAVSLEQQALATIRQW 837

Query: 911  TIKLAKRLNVCGLMNCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSG 970
            +  LA  L V GL+N Q+AI   GDVY++EANPRASRTVPFV+KA G PLAK A+ +MSG
Sbjct: 838  SEALALALQVNGLINLQFAI-KDGDVYIIEANPRASRTVPFVAKATGVPLAKVASQIMSG 896

Query: 971  KSLNDLGFTKEVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKA 1030
            K+L  +G T E +P   +VKEAVLPF++F G D +LGPEMRSTGEVMG    F +A+AKA
Sbjct: 897  KTLEQIGLTTEPVPPLQAVKEAVLPFKRFPGADSILGPEMRSTGEVMGTATGFGLAYAKA 956

Query: 1031 QIAAGQKLPLSGTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERV 1090
            ++AA + LP SGTVFLS +D  KP L  +A+    +GF++V+T GTA +L   G++VE V
Sbjct: 957  ELAASEALPTSGTVFLSTHDRDKPALLPVAQRLAQLGFRLVATEGTARWLTEVGLSVEPV 1016

Query: 1091 LKMHEGRPHAGDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALAN 1150
            LK+HEGRP+  D + +G+IQ+++ T  G      D   LRR  + Y V  +TT++GA A 
Sbjct: 1017 LKVHEGRPNIEDAIRSGEIQLVINTPVGRQAAH-DDRYLRRAAIDYAVTTVTTLAGARAA 1075

Query: 1151 AEAIRSLKSNTVTMTALQDF 1170
             E I +L+   + + ALQD 
Sbjct: 1076 VEGIAALQVQQLQVNALQDI 1095


>gi|427702124|ref|YP_007045346.1| carbamoyl-phosphate synthase large subunit [Cyanobium gracile PCC
            6307]
 gi|427345292|gb|AFY28005.1| carbamoyl-phosphate synthase, large subunit [Cyanobium gracile PCC
            6307]
          Length = 1107

 Score = 1400 bits (3625), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 684/1078 (63%), Positives = 842/1078 (78%), Gaps = 27/1078 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            +RTDLR+IL+LG+GPIVIGQACEFDYSGTQACKAL+ EGYEV+L+NSNPA+IMTDP LAD
Sbjct: 3    RRTDLRRILLLGSGPIVIGQACEFDYSGTQACKALRAEGYEVVLVNSNPASIMTDPDLAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
            RTYI P+TPE+V +V+E ERPDALLPTMGGQTALNLAVALAE+G LE YGVELIGA L A
Sbjct: 63   RTYIEPLTPEVVARVIELERPDALLPTMGGQTALNLAVALAENGTLEAYGVELIGADLAA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I+KAEDR LFK+AM  IGV   PSGI N L+E I + + IG +P IIRPAFTLGG+GGGI
Sbjct: 123  IRKAEDRLLFKEAMARIGVAVCPSGIANDLEEAIRVGDAIGTYPRIIRPAFTLGGSGGGI 182

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN EEF+A CK+GL AS  SQ+L+EKSLLGWKE+ELEVMRD ADNVVI+CSIEN+DPMG
Sbjct: 183  AYNPEEFQAFCKSGLEASPVSQILIEKSLLGWKEFELEVMRDTADNVVIVCSIENLDPMG 242

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTD+EYQRLRD SIAIIREIGV+ GGSN+QFA+NP +G+V+VIEMN
Sbjct: 243  VHTGDSITVAPAQTLTDREYQRLRDQSIAIIREIGVDTGGSNIQFAINPANGDVVVIEMN 302

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRF 447
            PRVSRSSALASKATGFPIAK+AA+L+VGY+LD+I NDIT  TPA FEP+IDYVVTKIPRF
Sbjct: 303  PRVSRSSALASKATGFPIAKIAARLAVGYTLDEIVNDITGATPACFEPTIDYVVTKIPRF 362

Query: 448  AFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDWE 507
            AFEKF GS  +LTT MKSVGEAMA+GR+F+ESFQKALRSLE G +GWGC    +   D  
Sbjct: 363  AFEKFRGSPAVLTTSMKSVGEAMAIGRSFEESFQKALRSLETGHAGWGCDR-PDPPQDPA 421

Query: 508  QLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLT-QSV 566
             L+  LR+P+PDR+ A+ AAM  G   DEIH LS ID WFL + + ++ VE  LL  +S+
Sbjct: 422  DLERQLRIPSPDRIHAVRAAMVAGRSDDEIHRLSAIDPWFLAKLRRILTVETTLLRGRSL 481

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
              +   D  E+K+ GFSD+QIA+AT S E  VR +R +LGV   +K VDTCAAEF ++TP
Sbjct: 482  EAIAAADLLELKQTGFSDRQIAWATGSDELTVRRRRQALGVRAVFKTVDTCAAEFASSTP 541

Query: 627  YMYSSYDF----------------ECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTS 670
            Y Y++Y+                 E E  P  ++KV+ILGGGPNRIGQGIEFDYCCCH S
Sbjct: 542  YHYATYERPLERLEADGSLTLLAPEDEVTPETRRKVMILGGGPNRIGQGIEFDYCCCHAS 601

Query: 671  FSLQSAGYETIMMNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQT 730
            F+L+ AG+ T+M+NSNPETVSTDYDTSDRLYFEPLT+EDVLNVI+ E+PEG+IVQFGGQT
Sbjct: 602  FALRQAGFATVMVNSNPETVSTDYDTSDRLYFEPLTLEDVLNVIEAEKPEGVIVQFGGQT 661

Query: 731  PLKLSLPIHQYLDEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGG 790
            PLKL++P+ ++L+      A+G    R+WGTSP+SID AEDRE+F AI++ L I QP+ G
Sbjct: 662  PLKLAIPLLRWLESEE-GRATG---TRLWGTSPESIDRAEDREQFEAILRRLEIRQPRNG 717

Query: 791  IAKSEADALAIAKEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLID 850
            +A+++ +A A+A  +GYPVVVRPSYVLGGRAME+V+ +E L  Y+  AV+V+P+ PVLID
Sbjct: 718  LARNDGEARAVAAAVGYPVVVRPSYVLGGRAMEVVFDEEELNRYMVEAVQVEPDHPVLID 777

Query: 851  KYLSDAIEIDVDALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSW 910
            +YL +AIE+DVDAL D  G VVIGG+MEHIE AG+HSGDSAC +P+ ++    L TI  W
Sbjct: 778  QYLENAIEVDVDALCDRQGTVVIGGLMEHIEPAGIHSGDSACALPSVSLGPEALATIRRW 837

Query: 911  TIKLAKRLNVCGLMNCQYAITTSG----DVYLLEANPRASRTVPFVSKAIGHPLAKYAAL 966
            + +LA  L V GL+N Q+A+   G     V+++EANPRASRTVPFV+KA G PLAK A+ 
Sbjct: 838  STELALALEVRGLINLQFAVQNDGAGNETVFIIEANPRASRTVPFVAKATGVPLAKIASQ 897

Query: 967  VMSGKSLNDLGFTKEVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIA 1026
            +M+G++L +LG   E  P   +VKEAVLPF++F G D LLGPEMRSTGEVMGI  SF +A
Sbjct: 898  LMAGRTLTELGLLAEPRPPRQTVKEAVLPFKRFPGADTLLGPEMRSTGEVMGIAASFGLA 957

Query: 1027 FAKAQIAAGQKLPLSGTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIA 1086
            +AKA++AAG+ LP SG+VFLS +D  KP L  +A+A L  GF + +T+GTA  L   G+A
Sbjct: 958  YAKAELAAGEPLPTSGSVFLSTHDRDKPALVPVARALLAAGFTLTATNGTAAMLSQAGLA 1017

Query: 1087 VERVLKMHEGRPHAGDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTV 1144
            VE VLK+HEGRP+  D + +G +Q++V T  G      D   LR   L Y VP +TT+
Sbjct: 1018 VEPVLKVHEGRPNIEDAIRSGLVQLVVNTPVGRQAAH-DDRYLRLAALDYAVPTVTTM 1074


>gi|113953489|ref|YP_730413.1| carbamoyl phosphate synthase large subunit [Synechococcus sp. CC9311]
 gi|113880840|gb|ABI45798.1| carbamoyl-phosphate synthase, large subunit [Synechococcus sp.
            CC9311]
          Length = 1107

 Score = 1398 bits (3619), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 687/1103 (62%), Positives = 851/1103 (77%), Gaps = 27/1103 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            +R DLR+IL+LG+GPIVIGQACEFDYSGTQACKAL+ EGYEVILINSNPA+IMTDP +AD
Sbjct: 3    RRNDLRRILLLGSGPIVIGQACEFDYSGTQACKALRAEGYEVILINSNPASIMTDPEMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
            RTY+ P+TP++V +V+E ERPDALLPTMGGQTALNLAVAL++ G L+++GVELIGA L A
Sbjct: 63   RTYVEPLTPDVVTRVIELERPDALLPTMGGQTALNLAVALSKDGTLDRFGVELIGADLKA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I+KAEDR LFKQAM+ IGV   PSGI +TL+E  S+   I  +P IIRPAFTLGG+GGGI
Sbjct: 123  IQKAEDRQLFKQAMERIGVHVCPSGIASTLEEAESVGASISSYPRIIRPAFTLGGSGGGI 182

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN EEF AICK GL AS  SQ+L+EKSLLGWKE+ELEVMRDLADNVVI+CSIEN+DPMG
Sbjct: 183  AYNPEEFSAICKTGLDASPVSQILIEKSLLGWKEFELEVMRDLADNVVIVCSIENLDPMG 242

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTD+EYQRLRD SIAIIREIGV  GGSN+QFA+NP DGEV+VIEMN
Sbjct: 243  VHTGDSITVAPAQTLTDREYQRLRDQSIAIIREIGVATGGSNIQFAINPADGEVVVIEMN 302

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRF 447
            PRVSRSSALASKATGFPIAK+AA+L++GY+LD+I NDIT KTPA FEP+IDYVVTK+PRF
Sbjct: 303  PRVSRSSALASKATGFPIAKIAARLAIGYTLDEILNDITGKTPACFEPTIDYVVTKVPRF 362

Query: 448  AFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDWE 507
            AFEKF GS  +LTT MKSVGEAMA+GR F+ESFQKALRSLE G SGWG  +  E      
Sbjct: 363  AFEKFRGSPAVLTTAMKSVGEAMAIGRCFEESFQKALRSLETGLSGWG-GDRPEPSCSKT 421

Query: 508  QLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLT-QSV 566
             L+ SLR P+PDR+ A+ +AM  GM    IHELS ID WFL + + LID E  LL  +S+
Sbjct: 422  DLERSLRTPSPDRILAVRSAMLSGMTDAHIHELSHIDPWFLAKLRGLIDAESDLLKGKSL 481

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
             ++ +   +++K  G+SD+QIA+   S E  VRE+R  LGV P +K VDTCAAEF ++TP
Sbjct: 482  EDLDETILFKLKTLGYSDRQIAWFVDSKELNVRERRDQLGVTPVFKTVDTCAAEFASSTP 541

Query: 627  YMYSSYDF----------------ECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTS 670
            Y YS+Y+                   E A   + K++ILGGGPNRIGQGIEFDYCCCH S
Sbjct: 542  YHYSTYERPLFRLKPDGLLQPMAPSTEVATETRPKLMILGGGPNRIGQGIEFDYCCCHAS 601

Query: 671  FSLQSAGYETIMMNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQT 730
            FS Q  G+ T+M+NSNPETVSTDYD+SDRLYFEP+T+EDVLNVI+ ERP G+IVQFGGQT
Sbjct: 602  FSAQDQGFATVMLNSNPETVSTDYDSSDRLYFEPITLEDVLNVIEAERPNGVIVQFGGQT 661

Query: 731  PLKLSLPIHQYLDEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGG 790
            PLKL+L +  +L     P     G  +IWGTSP SID AEDRE+F AI+++L I QP+ G
Sbjct: 662  PLKLALSLLNWLST---PQGKATG-TQIWGTSPASIDLAEDREQFEAILRKLEIRQPRNG 717

Query: 791  IAKSEADALAIAKEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLID 850
            +A+SE +A +IA  +GYPVVVRPSYVLGGRAME+VY +E L  Y++ AV+V+P+ PVLID
Sbjct: 718  LARSEVEARSIAGNVGYPVVVRPSYVLGGRAMEVVYDEEELNRYMKEAVQVEPDHPVLID 777

Query: 851  KYLSDAIEIDVDALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSW 910
            +YL +A+E+DVDAL D  G VVIGG+MEHIE AG+HSGDSAC +P+ ++S   L  I  W
Sbjct: 778  QYLENAVEVDVDALCDHEGTVVIGGLMEHIEPAGIHSGDSACCLPSISLSEDALSLIRRW 837

Query: 911  TIKLAKRLNVCGLMNCQYAITTSGD----VYLLEANPRASRTVPFVSKAIGHPLAKYAAL 966
            +  LA  L V GL+N Q+A+  + D    V+++EANPRASRTVPFV+KA G PLA+ A  
Sbjct: 838  SEALAITLKVQGLINLQFAVQRAADGQEKVFIIEANPRASRTVPFVAKATGVPLARLATR 897

Query: 967  VMSGKSLNDLGFTKEVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIA 1026
            +M+G++L+ +G  KE +P   +VKEAVLPF +F G D LLGPEMRSTGEVMG    F +A
Sbjct: 898  LMAGETLSQVGLLKEPVPPLQTVKEAVLPFRRFPGSDSLLGPEMRSTGEVMGSASDFGMA 957

Query: 1027 FAKAQIAAGQKLPLSGTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIA 1086
            FAKA++AAG+ LP +GTVFLS +D  KP L  +A+  + +GF++++TSGTA  L  +G+ 
Sbjct: 958  FAKAELAAGEALPTTGTVFLSTHDRDKPALVPVARQLIGLGFQLMATSGTAQALRNEGLQ 1017

Query: 1087 VERVLKMHEGRPHAGDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSG 1146
            VE VLK+HEGRP+  D++ +G +Q+++ T  G      D   LRR  L Y VP +TT++G
Sbjct: 1018 VESVLKVHEGRPNIEDLIRSGGVQLVINTPIGRQAAH-DDRYLRRAALDYSVPTLTTLAG 1076

Query: 1147 ALANAEAIRSLKSNTVTMTALQD 1169
            A A  EAI +L++ T+ + ALQD
Sbjct: 1077 ARAAVEAIEALQTRTIVIHALQD 1099


>gi|352093770|ref|ZP_08954941.1| carbamoyl-phosphate synthase, large subunit [Synechococcus sp. WH
            8016]
 gi|351680110|gb|EHA63242.1| carbamoyl-phosphate synthase, large subunit [Synechococcus sp. WH
            8016]
          Length = 1107

 Score = 1397 bits (3617), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 689/1103 (62%), Positives = 854/1103 (77%), Gaps = 27/1103 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            +R DLR+IL+LG+GPIVIGQACEFDYSGTQACKAL+ EG+EVILINSNPA+IMTDP +AD
Sbjct: 3    RRNDLRRILLLGSGPIVIGQACEFDYSGTQACKALRAEGFEVILINSNPASIMTDPEMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
            RTY+ P+TP++V +V+E+ERPDALLPTMGGQTALNLAVALAE+G LE++GVELIGA L A
Sbjct: 63   RTYVEPLTPDVVTRVIEQERPDALLPTMGGQTALNLAVALAENGTLERFGVELIGADLKA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I+KAEDR LFKQAM+ IGV   PSGI + LDE  S+   IG +P IIRPAFTLGG+GGGI
Sbjct: 123  IQKAEDRQLFKQAMERIGVHVCPSGIASNLDEAESVGASIGSYPRIIRPAFTLGGSGGGI 182

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN EEF AICK GL AS  SQ+L+EKSLLGWKE+ELEVMRDLADNVVI+CSIEN+DPMG
Sbjct: 183  AYNPEEFSAICKTGLDASPVSQILIEKSLLGWKEFELEVMRDLADNVVIVCSIENLDPMG 242

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTD+EYQRLRD SIAIIREIGV  GGSN+QFA+NP DGEV+VIEMN
Sbjct: 243  VHTGDSITVAPAQTLTDREYQRLRDQSIAIIREIGVATGGSNIQFAINPADGEVVVIEMN 302

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRF 447
            PRVSRSSALASKATGFPIAK+AA+L++GY+LD+I NDIT KTPA FEP+IDYVVTK+PRF
Sbjct: 303  PRVSRSSALASKATGFPIAKIAARLAIGYTLDEILNDITGKTPACFEPTIDYVVTKVPRF 362

Query: 448  AFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDWE 507
            AFEKF GS  +LTT MKSVGEAMA+GR F+ESFQKALRSLE G SGWG  +  E      
Sbjct: 363  AFEKFRGSPAVLTTAMKSVGEAMAIGRCFEESFQKALRSLETGLSGWG-GDRPEPSCSKT 421

Query: 508  QLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLT-QSV 566
             L+ SLR P+PDR+ A+ +AM  GM  D I+ELS ID WFL + + LID E  LL  +++
Sbjct: 422  DLERSLRTPSPDRILAVRSAMLAGMTDDHIYELSHIDPWFLAKLRGLIDAESELLKGRTL 481

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
             ++ +    ++K  G+SD+QIA+   S E +VRE+R  LGVIP +K VDTCAAEF ++TP
Sbjct: 482  GDLDEPALLKLKMLGYSDRQIAWFVDSKELDVRERRDQLGVIPVFKTVDTCAAEFASSTP 541

Query: 627  YMYSSYDF----------------ECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTS 670
            Y YS+Y+                   E A   + K++ILGGGPNRIGQGIEFDYCCCH S
Sbjct: 542  YHYSTYERPLFRLKPDGQLQPMAPSTEVAVETRPKLMILGGGPNRIGQGIEFDYCCCHAS 601

Query: 671  FSLQSAGYETIMMNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQT 730
            FS Q  G+ T+M+NSNPETVSTDYD+SDRLYFEPLT+EDVLNVI+ E P G+IVQFGGQT
Sbjct: 602  FSAQDQGFATVMLNSNPETVSTDYDSSDRLYFEPLTLEDVLNVIEAECPSGVIVQFGGQT 661

Query: 731  PLKLSLPIHQYLDEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGG 790
            PLKL+LP+  +L     P     G  +IWGTSP+SID AEDRE+F AI+++L I QP+ G
Sbjct: 662  PLKLALPLLNWLST---PKGVSTG-TQIWGTSPESIDLAEDREQFEAILRKLDIRQPRNG 717

Query: 791  IAKSEADALAIAKEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLID 850
            +A+SE +A +IA ++GYPVVVRPSYVLGGRAME+VY +  L  Y++ AV+V+P+ PVLID
Sbjct: 718  LARSEIEARSIAGKVGYPVVVRPSYVLGGRAMEVVYDETELNRYMKEAVQVEPDHPVLID 777

Query: 851  KYLSDAIEIDVDALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSW 910
            +YL +A+E+DVDAL D  G VVIGG+MEHIE AG+HSGDSAC +P+ ++S   L  I  W
Sbjct: 778  QYLENAVEVDVDALCDREGTVVIGGLMEHIEPAGIHSGDSACCLPSISLSDDALAVIRRW 837

Query: 911  TIKLAKRLNVCGLMNCQYAITTSGD----VYLLEANPRASRTVPFVSKAIGHPLAKYAAL 966
            +  LA  L V GL+N Q+A+    D    V+++EANPRASRTVPFV+KA G PLA+ A  
Sbjct: 838  SEALATTLKVQGLINLQFAVQRDVDGEEKVFIIEANPRASRTVPFVAKATGVPLARLATR 897

Query: 967  VMSGKSLNDLGFTKEVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIA 1026
            +M+G++L+ +G  KE IP   +VKEAVLPF +F G D LLGPEMRSTGEVMG    F +A
Sbjct: 898  LMAGETLSQVGLLKEPIPPLQTVKEAVLPFRRFPGADSLLGPEMRSTGEVMGSASDFGMA 957

Query: 1027 FAKAQIAAGQKLPLSGTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIA 1086
            FAKA++AAG+ LP +GTVFLS +D  K  L  +A+  + +GF++++TSGTA  L  +G+ 
Sbjct: 958  FAKAELAAGEALPTAGTVFLSTHDRDKTDLVPVARQLIGLGFELIATSGTARALREQGLD 1017

Query: 1087 VERVLKMHEGRPHAGDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSG 1146
            V+ VLK+HEGRP+  D++ +G +Q+++ T  G      D   LRR  L Y VP +TT++G
Sbjct: 1018 VQSVLKVHEGRPNIEDLIRSGGVQLVINTPIGRQAAH-DDRYLRRAALDYSVPTLTTLAG 1076

Query: 1147 ALANAEAIRSLKSNTVTMTALQD 1169
            A A  EAI +L++ T+ + ALQD
Sbjct: 1077 ARAAVEAIEALQTRTIVIHALQD 1099


>gi|254432413|ref|ZP_05046116.1| carbamoyl-phosphate synthase, large subunit [Cyanobium sp. PCC 7001]
 gi|197626866|gb|EDY39425.1| carbamoyl-phosphate synthase, large subunit [Cyanobium sp. PCC 7001]
          Length = 1113

 Score = 1396 bits (3613), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 680/1105 (61%), Positives = 854/1105 (77%), Gaps = 29/1105 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            +RTDL++IL+LG+GPIVIGQACEFDYSGTQACKAL+ EGYEV+L+NSNPA+IMTDP +AD
Sbjct: 3    RRTDLKRILLLGSGPIVIGQACEFDYSGTQACKALRAEGYEVVLVNSNPASIMTDPDMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
            RTYI P+TPE+V +V+  E+PDALLPTMGGQTALNLAV LAE+G L ++GVELIGA L+A
Sbjct: 63   RTYIEPLTPEVVARVIAIEKPDALLPTMGGQTALNLAVTLAENGTLAEFGVELIGADLEA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I+KAEDR LFKQAM+ IGV   PSGI N L+E  ++ + IG +P IIRPAFTLGG+GGGI
Sbjct: 123  IRKAEDRQLFKQAMEKIGVAVCPSGIANNLEEAEAVGDAIGSYPRIIRPAFTLGGSGGGI 182

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN EEF A CK+GL AS  SQ+L+E+SLLGWKE+ELEVMRD ADNVVI+CSIEN+DPMG
Sbjct: 183  AYNPEEFRAFCKSGLEASPVSQILIEQSLLGWKEFELEVMRDTADNVVIVCSIENLDPMG 242

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTD+EYQRLRD SIAIIREIGV+ GGSN+QFA+NP +G+V+VIEMN
Sbjct: 243  VHTGDSITVAPAQTLTDREYQRLRDQSIAIIREIGVDTGGSNIQFAINPANGDVVVIEMN 302

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRF 447
            PRVSRSSALASKATGFPIAK+AA+L+VGY+LD+I NDIT  TPA FEP+IDYVVTKIPRF
Sbjct: 303  PRVSRSSALASKATGFPIAKLAARLAVGYTLDEIINDITGATPACFEPTIDYVVTKIPRF 362

Query: 448  AFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDWE 507
            AFEKF GS  +LTT MKSVGEAMA+GR+F+ESFQKALRSLE G +GWGC    +   D  
Sbjct: 363  AFEKFQGSPAVLTTSMKSVGEAMAIGRSFEESFQKALRSLETGHAGWGCDR-PDPSPDAA 421

Query: 508  QLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLT-QSV 566
             L  +LR P P+R+ A+  AM  G+   EIH LS ID WFL + + ++  EQ LL  +S+
Sbjct: 422  ALCSALRTPTPERIFAVRTAMVAGLSDAEIHRLSAIDPWFLAKLRGIVTAEQALLRGRSL 481

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
              +  +    +K+ GFSD QIA+AT S +  VR +R +LGV   +K VDTCAAEF + TP
Sbjct: 482  EELDGEALLRLKQLGFSDPQIAWATGSDQLAVRRRRQALGVNAVFKTVDTCAAEFASQTP 541

Query: 627  YMYSSYDF----------------ECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTS 670
            Y YS+Y+                 E E  P  ++KV+ILGGGPNRIGQGIEFDYCCCH S
Sbjct: 542  YHYSTYERPLERIGADGVVAVVPPENEVTPESRRKVMILGGGPNRIGQGIEFDYCCCHAS 601

Query: 671  FSLQSAGYETIMMNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQT 730
            F+LQ  G+ T+M+NSNPETVSTDYDTSDRLYFEPLT+EDVLNVI+ E+P G+IVQFGGQT
Sbjct: 602  FALQEEGFATVMVNSNPETVSTDYDTSDRLYFEPLTLEDVLNVIEAEKPAGVIVQFGGQT 661

Query: 731  PLKLSLPIHQYLDEHRLPSASGDGL-VRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKG 789
            PLKL+LP+ ++LD     SA G     RIWGTSP SID AEDRE+F AI++ L I QP+ 
Sbjct: 662  PLKLALPLLRWLD-----SAEGQATGTRIWGTSPQSIDTAEDREQFEAILRRLDIRQPRN 716

Query: 790  GIAKSEADALAIAKEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLI 849
            G+A+SE +ALA+A+ +GYPVVVRPSYVLGGRAME+V+  + L  Y+  AV V+P+ PVLI
Sbjct: 717  GLARSEEEALAVAERVGYPVVVRPSYVLGGRAMEVVFNVQELKRYMAEAVNVEPDHPVLI 776

Query: 850  DKYLSDAIEIDVDALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISS 909
            D+YL +A+E+DVDAL D+ G V+IGG+MEHIE AG+HSGDSAC +PT ++  + L TI +
Sbjct: 777  DQYLENAVEVDVDALCDATGTVLIGGVMEHIEPAGIHSGDSACCLPTVSLGEAGLATIRA 836

Query: 910  WTIKLAKRLNVCGLMNCQYAITTSGD----VYLLEANPRASRTVPFVSKAIGHPLAKYAA 965
            W+  LA  L+V GL+N Q+A+  + +    V+++EANPRASRTVPFV+KA G PLAK A+
Sbjct: 837  WSKALALALDVRGLINLQFAVQRTAEGEERVFIIEANPRASRTVPFVAKATGVPLAKVAS 896

Query: 966  LVMSGKSLNDLGFTKEVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPI 1025
             +M+G++L DLG   E +P   +VKEAVLPF++F G D +LGPEMRSTGEVMGI  +F +
Sbjct: 897  RLMAGRTLADLGLRTEPVPPLQTVKEAVLPFKRFPGSDTVLGPEMRSTGEVMGIAPAFGM 956

Query: 1026 AFAKAQIAAGQKLPLSGTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGI 1085
            A+AKA+  AG+ LP +G  FLS +D  K  L  +A+   ++GF++++T+GTA  L  +G+
Sbjct: 957  AYAKAEQGAGESLPTAGRAFLSTHDRDKQGLVPVARGLAELGFELIATAGTAAVLAEQGL 1016

Query: 1086 AVERVLKMHEGRPHAGDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVS 1145
             VE +LK+HEGRP+  D + +G IQ++V T  G      D   LRR  L Y VP +TT++
Sbjct: 1017 QVEPILKVHEGRPNIEDAIRSGLIQLVVNTPIGRQA-AFDDTYLRRAALDYAVPTLTTLA 1075

Query: 1146 GALANAEAIRSLKSNTVTMTALQDF 1170
            GA A  EAIR+L+ + + +TALQD 
Sbjct: 1076 GARAAVEAIRALQDHHLQVTALQDI 1100


>gi|159903483|ref|YP_001550827.1| carbamoyl phosphate synthase large subunit [Prochlorococcus marinus
            str. MIT 9211]
 gi|159888659|gb|ABX08873.1| carbamoyl-phosphate synthase, large subunit [Prochlorococcus marinus
            str. MIT 9211]
          Length = 1102

 Score = 1395 bits (3610), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 686/1111 (61%), Positives = 863/1111 (77%), Gaps = 41/1111 (3%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            +R D+R+ILILG+GPIVIGQACEFDYSGTQACKALKEEGYEV+L+NSNPA+IMTDP +A 
Sbjct: 3    RRKDIRRILILGSGPIVIGQACEFDYSGTQACKALKEEGYEVVLVNSNPASIMTDPEIAY 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
            RTYI P+T +++E+V+E ERP ALLPTMGGQTALN++V LAE G L+K+GVELIGA L +
Sbjct: 63   RTYIEPITSDVIEKVIEVERPQALLPTMGGQTALNISVELAEKGILKKFGVELIGADLAS 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            IK+AEDR LFK +MK IGV   PSGI + ++E +S+ N I  FP IIRPAFTLGG+GGGI
Sbjct: 123  IKRAEDRQLFKDSMKNIGVNVCPSGIASNIEESLSVGNTISTFPRIIRPAFTLGGSGGGI 182

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYNKEEF +ICK GL AS  SQ+L+EKSLLGWKE+ELEVMRD++DNVVI+CSIEN+DPMG
Sbjct: 183  AYNKEEFISICKQGLEASPVSQILIEKSLLGWKEFELEVMRDISDNVVIVCSIENLDPMG 242

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            +HTGDSITVAPAQTLTD+EYQRLRDYSI IIREIGVE GGSN+QFAVNP+DGEV+VIEMN
Sbjct: 243  IHTGDSITVAPAQTLTDREYQRLRDYSIKIIREIGVETGGSNIQFAVNPIDGEVIVIEMN 302

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRF 447
            PRVSRSSALASKATGFPIAK+AA L+VGY LD+I NDIT KTPA FEP+IDYVVTKIPRF
Sbjct: 303  PRVSRSSALASKATGFPIAKIAALLAVGYRLDEIVNDITGKTPACFEPTIDYVVTKIPRF 362

Query: 448  AFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKEL--DWD 505
            AFEKF GS  +L T MKSVGEAMA+GR+F+ESFQKALRSLE G SGWGC    +L    D
Sbjct: 363  AFEKFGGSPAVLNTSMKSVGEAMAIGRSFEESFQKALRSLEVGLSGWGCDGTDQLIKSVD 422

Query: 506  WEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLT-Q 564
             ++L   LR P+P+R+ A+  AM +G   + I+ +S ID WFL++ + +I  EQ +LT +
Sbjct: 423  LDKL---LRTPSPERIMAVRTAMLEGRSDENIYRISNIDPWFLSKLRNIIIAEQSILTDK 479

Query: 565  SVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEAN 624
            ++ ++ +++ + +K+ GFSD+QIA+A +  E ++R  R    ++P +K VDTCAAEF ++
Sbjct: 480  NIEDVNEEELFLLKQLGFSDRQIAWALRVNELQIRSLRKRFNILPKFKTVDTCAAEFSSS 539

Query: 625  TPYMYSSY------------------DFECESAPTQKKKVLILGGGPNRIGQGIEFDYCC 666
            TPY YS+Y                  D E E++ T   KVLILGGGPNRIGQGIEFDYCC
Sbjct: 540  TPYHYSTYERQVKKIDLDGTINKIELDREIEASYTN--KVLILGGGPNRIGQGIEFDYCC 597

Query: 667  CHTSFSLQSAGYETIMMNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQF 726
            CH+S+  Q  GY TIM+NSNPETVSTDYDTSD LYFEPLT+ED+LN+I+ E+P G+IVQF
Sbjct: 598  CHSSYQFQVDGYTTIMVNSNPETVSTDYDTSDILYFEPLTLEDILNIIEYEQPNGVIVQF 657

Query: 727  GGQTPLKLSLPIHQYLDEHRLPSASGDGL---VRIWGTSPDSIDAAEDRERFNAIIKELS 783
            GGQTPLKLS+PI  +L+       S DG+    +I GTSP SID AEDRE+F+ I+ +L 
Sbjct: 658  GGQTPLKLSIPIMNWLN-------SSDGIKTQTKILGTSPISIDKAEDREQFDKILNDLK 710

Query: 784  IEQPKGGIAKSEADALAIAKEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDP 843
            I+QP+ GIA+S ++A+AIA++I YP+VVRPSYVLGGRAMEIVY DE LV Y+  AV+V+P
Sbjct: 711  IKQPRNGIARSISEAIAIAQDIKYPIVVRPSYVLGGRAMEIVYEDEELVRYMNEAVKVEP 770

Query: 844  ERPVLIDKYLSDAIEIDVDALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSC 903
            + PVLID+YL +AIE+DVDAL D  GNVVIGG+MEHIE AG+HSGDSAC +P+ ++S   
Sbjct: 771  DHPVLIDQYLQNAIEVDVDALCDRTGNVVIGGLMEHIEPAGIHSGDSACCLPSISLSKDS 830

Query: 904  LDTISSWTIKLAKRLNVCGLMNCQYA--ITTSG--DVYLLEANPRASRTVPFVSKAIGHP 959
              TI  WT  L+K LNV GL+N Q+A  I T G   V+++EANPRASRTVPFVSKA G P
Sbjct: 831  QLTIRKWTESLSKALNVEGLINLQFAVQIDTEGIEQVFIIEANPRASRTVPFVSKATGLP 890

Query: 960  LAKYAALVMSGKSLNDLGFTKEVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGI 1019
            LA+ A  ++ GK+LN LG TKE IP   ++KEAV+PF++F G D +LGPEMRSTGEVMG 
Sbjct: 891  LARIATSLIGGKTLNQLGVTKEPIPPLQTIKEAVMPFKRFPGSDSVLGPEMRSTGEVMGS 950

Query: 1020 DMSFPIAFAKAQIAAGQKLPLSGTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHF 1079
               F +A+AK+++AAG+ LP SG VFLS +D  KP L  IA++ +D+GF + +T GT+ +
Sbjct: 951  ATDFGMAYAKSELAAGEALPTSGVVFLSTHDRDKPSLVPIARSLIDLGFTLTATLGTSKY 1010

Query: 1080 LELKGIAVERVLKMHEGRPHAGDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVP 1139
            L   G+ VE +LK+HEGRP+  D++ + QIQ+++ T  G      D   LRR  L Y VP
Sbjct: 1011 LMDAGVLVEPILKVHEGRPNIEDLIRSAQIQLIINTPIGRQAAH-DDKYLRRAALDYSVP 1069

Query: 1140 VITTVSGALANAEAIRSLKSNTVTMTALQDF 1170
             +TTV+GA A  EAI +L+++ +T+ ALQD 
Sbjct: 1070 TLTTVAGAKAAVEAITALQNHKITINALQDI 1100


>gi|317970260|ref|ZP_07971650.1| carbamoyl phosphate synthase large subunit [Synechococcus sp. CB0205]
          Length = 1097

 Score = 1394 bits (3607), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 683/1100 (62%), Positives = 847/1100 (77%), Gaps = 24/1100 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            +RTDLR+IL+LG+GPIVIGQACEFDYSGTQACKAL+ EG+EV+L+NSNPA+IMTDP +AD
Sbjct: 3    RRTDLRRILLLGSGPIVIGQACEFDYSGTQACKALRAEGFEVVLVNSNPASIMTDPDMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
            RTYI P+TP++V +V+E ERPDALLPTMGGQTALNLAVAL++ G LEKYGVELIGA L+A
Sbjct: 63   RTYIEPLTPDVVRRVIELERPDALLPTMGGQTALNLAVALSKDGTLEKYGVELIGANLEA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I+KAEDRDLFK+AM  IGV   PSGI  TL+E  ++ ++IG +P IIRPAFTLGG+GGGI
Sbjct: 123  IEKAEDRDLFKRAMGRIGVGVCPSGIATTLEEAEAVGDQIGSYPRIIRPAFTLGGSGGGI 182

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN EEF AIC +GL AS  +Q+L+E+SLLGWKE+ELEVMRD ADNVVI+CSIEN+DPMG
Sbjct: 183  AYNPEEFRAICLSGLDASPVNQILIEQSLLGWKEFELEVMRDTADNVVIVCSIENLDPMG 242

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTD+EYQRLRD SIAIIREIGV+ GGSN+QFA+NP +G+V+VIEMN
Sbjct: 243  VHTGDSITVAPAQTLTDREYQRLRDQSIAIIREIGVDTGGSNIQFAINPANGDVIVIEMN 302

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRF 447
            PRVSRSSALASKATGFPIAK+AA+L+VGY+LD+I NDIT KTPA FEP+IDYVVTK+PRF
Sbjct: 303  PRVSRSSALASKATGFPIAKIAARLAVGYTLDEIINDITGKTPACFEPTIDYVVTKVPRF 362

Query: 448  AFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDWE 507
            AFEKF GS  +LTT MKSVGEAMA+GR F+ESFQKALRSLE G +GWGC    +   +  
Sbjct: 363  AFEKFRGSPAVLTTAMKSVGEAMAIGRNFEESFQKALRSLETGHAGWGCDR-PDPSPERS 421

Query: 508  QLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLT-QSV 566
             L   LR P PDR+ A+  AM  G    +IH +S ID WFL + + +I+ EQ LL  Q++
Sbjct: 422  DLDRELRTPAPDRIFAVRTAMVNGYSDADIHRISAIDPWFLAKLRRIIESEQRLLKGQNL 481

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
            + +      E+K+ GFSD+QIA+AT S E EVR  R +LGV   +K VDTCAAEF ++TP
Sbjct: 482  TALDATALLELKQLGFSDRQIAWATGSKELEVRAHRQNLGVNAVFKTVDTCAAEFASSTP 541

Query: 627  YMYSSYDF----------------ECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTS 670
            Y Y++Y+                 E E  P  ++KV+ILGGGPNRIGQGIEFDYCC H S
Sbjct: 542  YHYATYERPMERLLPDGSLELIAPESEVQPESRRKVMILGGGPNRIGQGIEFDYCCVHAS 601

Query: 671  FSLQSAGYETIMMNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQT 730
            F+LQ  G+ T+M+NSNPETVSTDYDTSDRLYFEPLT EDVLNVI+ E+PEG+IVQFGGQT
Sbjct: 602  FALQEEGFATVMVNSNPETVSTDYDTSDRLYFEPLTFEDVLNVIEAEKPEGVIVQFGGQT 661

Query: 731  PLKLSLPIHQYLDEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGG 790
            PLKL++P+  +L     P+    G  RIWGTSP+SID AEDRE+F AI++ L I QP+ G
Sbjct: 662  PLKLAIPLLNWLQS---PAGQATG-TRIWGTSPESIDTAEDREQFEAILRRLDIRQPRNG 717

Query: 791  IAKSEADALAIAKEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLID 850
            +A+SEA+A  +A+ +GYPVVVRPSYVLGGRAME+VY ++ L  Y+  AV V+P+ PVLID
Sbjct: 718  LARSEAEARVVAERVGYPVVVRPSYVLGGRAMEVVYGEDELNRYMNEAVNVEPDHPVLID 777

Query: 851  KYLSDAIEIDVDALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSW 910
            +YL +A E+DVDAL D+ G VVIGG+MEHIE AGVHSGDSAC +P+ ++    L TI  W
Sbjct: 778  QYLENATEVDVDALCDATGKVVIGGLMEHIEPAGVHSGDSACALPSVSLEQEALATIRQW 837

Query: 911  TIKLAKRLNVCGLMNCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSG 970
            +  LA  L V GL+N Q+AI   G VY++EANPRASRTVPFV+KA G PLAK A+ +MSG
Sbjct: 838  SEALALALQVNGLINLQFAI-KDGLVYIIEANPRASRTVPFVAKATGAPLAKIASRIMSG 896

Query: 971  KSLNDLGFTKEVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKA 1030
            K+L+ +G T E  P   +VKEAVLPF++F G D +LGPEMRSTGEVMG   SF +A+AKA
Sbjct: 897  KTLDQIGLTSEPKPPLQAVKEAVLPFKRFPGADSILGPEMRSTGEVMGTATSFGLAYAKA 956

Query: 1031 QIAAGQKLPLSGTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERV 1090
            ++ A + LP SGTVFLS +D  K  L  +A+    +GF++V+T GTA  L   G+ VE V
Sbjct: 957  ELGASEALPTSGTVFLSTHDRDKSALLPVAQRLDQMGFRLVATEGTARALAEAGLKVETV 1016

Query: 1091 LKMHEGRPHAGDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALAN 1150
            LK+HEGRP+  D + +G+IQ+++ T  G      D   LRR  + Y V  +TT++GA A 
Sbjct: 1017 LKVHEGRPNIEDAIRSGEIQLVINTPVGRQAAH-DDKYLRRAAIDYAVTTVTTLAGARAA 1075

Query: 1151 AEAIRSLKSNTVTMTALQDF 1170
             E I +L++  + + ALQD 
Sbjct: 1076 VEGIAALQAQEMQVRALQDI 1095


>gi|452824371|gb|EME31374.1| carbamoyl-phosphate synthase large subunit [Galdieria sulphuraria]
          Length = 1327

 Score = 1391 bits (3600), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 687/1117 (61%), Positives = 860/1117 (76%), Gaps = 25/1117 (2%)

Query: 74   LSNGAASSKDQKLGKRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILIN 133
            L + A   + +++ KR DL+KIL++GAGPIVIGQACEFDYSGTQACKAL+ EGY+V+L+N
Sbjct: 121  LGDKAPKERYRRIRKRADLKKILVIGAGPIVIGQACEFDYSGTQACKALRAEGYQVVLVN 180

Query: 134  SNPATIMTDPGLADRTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGAL 193
            SNPATIMTDP  ADR YI P+ PE++ +++EKERP ALLPTMGGQTALNLA  L+++G L
Sbjct: 181  SNPATIMTDPETADRIYIEPLVPEVLTKIIEKERPQALLPTMGGQTALNLAFILSKTGVL 240

Query: 194  EKYGVELIGAKLDAIKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLI 253
            +++ VELIGA+LDAI+K EDR LFK+AM+ IG+KT PSGI N L+E   ++ +IG+FPLI
Sbjct: 241  DRFQVELIGARLDAIEKGEDRRLFKEAMERIGLKTCPSGIANNLEEAKQVSEKIGKFPLI 300

Query: 254  IRPAFTLGGTGGGIAYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADN 313
            IRPA+TLGGTGGGIAYN+EE+E + KAGL AS T Q+LV+ SLLGWKEYELEVMRD  DN
Sbjct: 301  IRPAYTLGGTGGGIAYNQEEYEEMAKAGLDASPTHQILVDLSLLGWKEYELEVMRDGVDN 360

Query: 314  VVIICSIENVDPMGVHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFA 373
            VVI+C IENVDPMGVHTGDSITVAP QTLTD+EYQRLRDY+IA+IREIGV+ GGSN+QFA
Sbjct: 361  VVIVCGIENVDPMGVHTGDSITVAPCQTLTDREYQRLRDYAIAVIREIGVDTGGSNIQFA 420

Query: 374  VNPVDGEVMVIEMNPRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASF 433
            VNP +GEV+++EMNPRVSRSSALASKATGFPIAK+AAKL++G SL +IPNDIT+KTPASF
Sbjct: 421  VNPENGEVVIVEMNPRVSRSSALASKATGFPIAKIAAKLAIGLSLPEIPNDITRKTPASF 480

Query: 434  EPSIDYVVTKIPRFAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLEC-GFS 492
            EPS+DYVVTKIPRFAFEKFPG+  +LTTQM+SVGEAMALGR+F ESFQKA+RSLE  G  
Sbjct: 481  EPSLDYVVTKIPRFAFEKFPGASNILTTQMRSVGEAMALGRSFCESFQKAIRSLEVSGRW 540

Query: 493  GWGCSNVKELDWDWEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFK 552
            G+GC    E      +L+ +LR P P+R+ A+  A+  GM +DEI++LS  D+WFL Q  
Sbjct: 541  GFGCDGKDEQILSRIELESALRTPTPERIFAVRQALMAGMSIDEIYQLSRYDRWFLYQLY 600

Query: 553  ELIDVEQFLLTQSVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYK 612
            E+   E  +  +S+ +++ ++ + +K +GFSD QIAFAT +TE++VR  R SL + P YK
Sbjct: 601  EIYQTELSIRNRSLESISAEELFAIKAKGFSDYQIAFATNTTEEKVRLYRKSLYMKPVYK 660

Query: 613  RVDTCAAEFEANTPYMYSSYD--------------FECE-SAPTQKKKVLILGGGPNRIG 657
             VDTCA EFE+ TPY+YS+Y+               E E    + KKK+LILGGGPNRIG
Sbjct: 661  TVDTCAVEFESYTPYLYSTYESRVVWGTAEEIAAGMESEVPISSGKKKILILGGGPNRIG 720

Query: 658  QGIEFDYCCCHTSFSLQSAGYETIMMNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLE 717
            QGIEFDYCC H  F+L+ A +ETIMMNSNPETVSTDYDTSDRLYFEPLT+EDV++VI+ E
Sbjct: 721  QGIEFDYCCVHACFALREAKFETIMMNSNPETVSTDYDTSDRLYFEPLTLEDVIHVIEAE 780

Query: 718  RPEGIIVQFGGQTPLKLSLPIHQYLDEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNA 777
            R +GI++QFGGQTPLKL++ + +YL       +  + +  I GTSP+SID AEDR+RF  
Sbjct: 781  RVDGIVIQFGGQTPLKLAMSLQKYLTSKEAKDSGVEAI--ILGTSPESIDIAEDRDRFVR 838

Query: 778  IIKELSIEQPKGGIAKSEADALAIAKEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLEN 837
            I+ EL I QP  GIA+S  +A  +A EIGYPVVVRPSYVLGGR MEIVY  + L  Y+  
Sbjct: 839  ILNELKIRQPSNGIARSLEEAQRVASEIGYPVVVRPSYVLGGRGMEIVYNQQQLAKYMTA 898

Query: 838  AVEVDPERPVLIDKYLSDAIEIDVDALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTK 897
            +V V+ E PVLID +L +A+E+DVDALAD  G VVIGGIMEHIEQAG+HSGDSAC++PT+
Sbjct: 899  SVVVESEHPVLIDHFLENAVEVDVDALADKTGKVVIGGIMEHIEQAGIHSGDSACILPTQ 958

Query: 898  TISSSCLDTISSWTIKLAKRLNVCGLMNCQYAITTSGD-VYLLEANPRASRTVPFVSKAI 956
            TI  S L TI  WTI LAKRL V GLMN Q+A+   GD V++LEANPRASRTVPF+SKAI
Sbjct: 959  TIPYSALVTIRQWTIALAKRLQVVGLMNVQWAV--QGDKVFILEANPRASRTVPFISKAI 1016

Query: 957  GHPLAKYAALVMSGKSLNDLGFTKEVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEV 1016
            G PLAK A+L+M GK+L +LGFT EVIPKH +VKEAVLPF KF   D+LL PEMRSTGEV
Sbjct: 1017 GIPLAKIASLLMIGKTLQELGFTTEVIPKHAAVKEAVLPFNKFPLSDMLLSPEMRSTGEV 1076

Query: 1017 MGIDMSFPIAFAKAQIAAGQKLPLSGTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGT 1076
            MGID S+P AF KAQ+AAG  LPL GT+ LSL +  K     +A  F+D+GF I++T GT
Sbjct: 1077 MGIDFSYPAAFVKAQMAAGTPLPLEGTILLSLAEEDKKQGVALAHDFIDLGFHILATRGT 1136

Query: 1077 AHFLELKGI---AVERVLKMHEGRPHAGDMVANGQIQMMVITSSGDSLDQIDGLKLRRRG 1133
               L  +G+    VE   ++ EGRP+  D + N +IQ+ ++T   D  D     ++RR  
Sbjct: 1137 YVHLIAEGLNPSQVEMAFQIGEGRPNIVDRIKNREIQLFIMTPGIDK-DTESEKQVRRTS 1195

Query: 1134 LAYKVPVITTVSGALANAEAIRSLKSNTVTMTALQDF 1170
            + +K+P+ITT++ A   A+ IR LKS   ++  +QD+
Sbjct: 1196 VQFKLPMITTLAAAKVAAQGIRILKSQEPSVICMQDY 1232


>gi|87125678|ref|ZP_01081522.1| carbamoyl-phosphate synthase, large subunit [Synechococcus sp.
            RS9917]
 gi|86166654|gb|EAQ67917.1| carbamoyl-phosphate synthase, large subunit [Synechococcus sp.
            RS9917]
          Length = 1107

 Score = 1389 bits (3594), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 690/1104 (62%), Positives = 854/1104 (77%), Gaps = 29/1104 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            +R+DLR+IL+LG+GPIVIGQACEFDYSGTQACKAL+ +G+EV+L+NSNPA+IMTDP +AD
Sbjct: 3    RRSDLRRILLLGSGPIVIGQACEFDYSGTQACKALRADGFEVVLVNSNPASIMTDPDMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
            RTY+ P+TPE+V +V+E+ERPDALLPTMGGQTALNLAVAL+E+G LE+YGVELIGA L A
Sbjct: 63   RTYVEPLTPEVVTRVIEQERPDALLPTMGGQTALNLAVALSENGTLERYGVELIGADLQA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I+KAEDR LFKQAM+ IGVK  PSGI ++L+E  ++   IG FP IIRPAFTLGG+GGGI
Sbjct: 123  IQKAEDRLLFKQAMERIGVKVCPSGIASSLEEADAVGAAIGSFPRIIRPAFTLGGSGGGI 182

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN E++ AICK+GL AS  SQ+L+E+SLLGWKE+ELEVMRDLADNVVI+CSIEN+DPMG
Sbjct: 183  AYNPEDYAAICKSGLDASPVSQILIEQSLLGWKEFELEVMRDLADNVVIVCSIENLDPMG 242

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTD+EYQRLRD +IAIIREIGV  GGSN+QFA+NPVDG+V+VIEMN
Sbjct: 243  VHTGDSITVAPAQTLTDREYQRLRDQAIAIIREIGVATGGSNIQFAINPVDGDVVVIEMN 302

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRF 447
            PRVSRSSALASKATGFPIAK+AA+L+VGY+LD+I NDIT KTPA FEP+IDYVVTKIPRF
Sbjct: 303  PRVSRSSALASKATGFPIAKIAARLAVGYTLDEILNDITGKTPACFEPTIDYVVTKIPRF 362

Query: 448  AFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDWE 507
            AFEKF GS  +LTT MKSVGEAMA+GR F+ESFQKALRSLE G SGWGC    E  W   
Sbjct: 363  AFEKFKGSPAILTTAMKSVGEAMAIGRCFEESFQKALRSLETGLSGWGCDR-DEAVWSKT 421

Query: 508  QLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVE-QFLLTQSV 566
             L+ +LR P+PDR+ A+ AAM  G    EIHELS ID WFL + ++LI  E + L  Q +
Sbjct: 422  DLERALRTPSPDRILAVRAAMLAGRSDGEIHELSRIDPWFLAKLRQLISAEQRLLQGQQL 481

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
              ++ +   E+K+ G+SD+QIAFA  S E  VR +R  LGV P +K VDTCAAEF + TP
Sbjct: 482  KQLSAEALLELKQLGYSDRQIAFAVGSDELAVRSQRDRLGVRPVFKTVDTCAAEFASTTP 541

Query: 627  YMYSSYDF----------------ECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTS 670
            Y YS+Y+                 E E  P ++ KV+ILGGGPNRIGQGIEFDYCCCH S
Sbjct: 542  YHYSTYERPVQRLNAEGHLETLAPESEVQPEERAKVMILGGGPNRIGQGIEFDYCCCHAS 601

Query: 671  FSLQSAGYETIMMNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQT 730
            F+ Q  G+ T+M+NSNPETVSTDYDTSDRLYFEPLT+EDVLNVI+ ERPEG+IVQFGGQT
Sbjct: 602  FAAQERGFATVMVNSNPETVSTDYDTSDRLYFEPLTLEDVLNVIETERPEGVIVQFGGQT 661

Query: 731  PLKLSLPIHQYLD-EHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKG 789
            PLKL+LP+ ++L+ E  L + +     RI GTSP+SID AEDRE+F AI+++L I QP+ 
Sbjct: 662  PLKLALPLLRWLETEPGLKTGT-----RILGTSPESIDRAEDREQFEAILRQLDIRQPRN 716

Query: 790  GIAKSEADALAIAKEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLI 849
            G+A+SEA+A  +A  +GYPVVVRPSYVLGGRAME+V+  E L  Y+  AV+V+P+ PVLI
Sbjct: 717  GLARSEAEAREVAAAVGYPVVVRPSYVLGGRAMEVVFDQEELDRYMAEAVQVEPDHPVLI 776

Query: 850  DKYLSDAIEIDVDALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISS 909
            D+YL +A E+DVDAL D+ G VVIGG+MEHIE AG+HSGDSAC +P  ++ +  L TI  
Sbjct: 777  DQYLENATEVDVDALCDASGTVVIGGLMEHIEPAGIHSGDSACCLPAVSLGAEALATIRR 836

Query: 910  WTIKLAKRLNVCGLMNCQYAIT--TSGD--VYLLEANPRASRTVPFVSKAIGHPLAKYAA 965
            W+  LA  L V GL+N Q+A+   TSG   VY++EANPRASRTVPFV+KA G PLA+ A 
Sbjct: 837  WSKALALALKVQGLINLQFAVQRDTSGKEVVYIIEANPRASRTVPFVAKATGQPLARIAT 896

Query: 966  LVMSGKSLNDLGFTKEVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPI 1025
             +M+G+SL  +G   E +P   +VKEAVLPF +F G D LLGPEMRSTGEVMG    F +
Sbjct: 897  RLMTGESLEQVGLLSEPVPPLQAVKEAVLPFRRFPGADSLLGPEMRSTGEVMGSAADFGM 956

Query: 1026 AFAKAQIAAGQKLPLSGTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGI 1085
            A+AKA++ AG  LP  GTVFLS +D  KP L  IA   +D+GF+I++T+GT+  L   G+
Sbjct: 957  AYAKAELGAGDGLPTRGTVFLSTHDRDKPALVPIASRLIDLGFQIIATAGTSTVLADAGL 1016

Query: 1086 AVERVLKMHEGRPHAGDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVS 1145
            AV  VLK+HEGRP+  D++ +G +Q+++ T  G      D   +RR  L Y VP +TT++
Sbjct: 1017 AVTPVLKVHEGRPNIEDLIRSGSVQLVINTPIGRQAAH-DDRYIRRAALDYNVPTVTTLA 1075

Query: 1146 GALANAEAIRSLKSNTVTMTALQD 1169
             A A  E I +L+   + + ALQD
Sbjct: 1076 AARAAVEGIDALQHQQLEIHALQD 1099


>gi|116072928|ref|ZP_01470190.1| carbamoyl phosphate synthetase, large subunit [Synechococcus sp.
            RS9916]
 gi|116068233|gb|EAU73985.1| carbamoyl phosphate synthetase, large subunit [Synechococcus sp.
            RS9916]
          Length = 1107

 Score = 1382 bits (3577), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 684/1103 (62%), Positives = 849/1103 (76%), Gaps = 27/1103 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            +R+DLR+IL+LG+GPIVIGQACEFDYSGTQACKAL+ +G+EV+L+NSNPA+IMTDP LAD
Sbjct: 3    RRSDLRRILLLGSGPIVIGQACEFDYSGTQACKALRADGFEVVLVNSNPASIMTDPELAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
            RTYI P+TPE+V +V+E+ERPDALLPTMGGQTALNLAVALAE+G LE+YGVELIGA L A
Sbjct: 63   RTYIEPLTPEVVTRVIEQERPDALLPTMGGQTALNLAVALAENGTLERYGVELIGADLPA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I+KAEDR LFKQAM+ IGVK  PSGI ++++E  ++   IG FP IIRPAFTLGG+GGGI
Sbjct: 123  IQKAEDRQLFKQAMERIGVKVCPSGIASSMEEAEAVGAAIGTFPRIIRPAFTLGGSGGGI 182

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN EE+ AICK+GL AS  SQ+L+E+SLLGWKE+ELEVMRD  DNVVI+CSIEN+DPMG
Sbjct: 183  AYNPEEYAAICKSGLEASPVSQILIEQSLLGWKEFELEVMRDQVDNVVIVCSIENLDPMG 242

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTD+EYQRLRD SIAIIREIGV  GGSN+QFA+NP DG+V+VIEMN
Sbjct: 243  VHTGDSITVAPAQTLTDREYQRLRDQSIAIIREIGVATGGSNIQFAINPDDGDVVVIEMN 302

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRF 447
            PRVSRSSALASKATGFPIAK+AA+L+VGY+LD+I NDIT KTPA FEP+IDYVVTKIPRF
Sbjct: 303  PRVSRSSALASKATGFPIAKIAARLAVGYTLDEILNDITGKTPACFEPTIDYVVTKIPRF 362

Query: 448  AFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDWE 507
            AFEKF GS  +LTT MKSVGEAMA+GR F+ESFQKALRSLE G SGWGC    ++     
Sbjct: 363  AFEKFRGSPAVLTTAMKSVGEAMAIGRCFEESFQKALRSLETGLSGWGCDR-PDVSMPAA 421

Query: 508  QLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLT-QSV 566
            +L+ SLR P+PDR+ A+ AAM +G    EIH LS ID WFL + + LI+ E  LL  +S+
Sbjct: 422  ELERSLRTPSPDRILAVRAAMVEGRTDAEIHALSRIDPWFLAKLRTLINAEASLLKGRSL 481

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
              +  D   ++K+ G+SD+QIA+AT S E  VR+ R   G+ P +K VDTCAAEF + TP
Sbjct: 482  EQLDADVLLQLKQLGYSDRQIAWATGSDELSVRQHRQQQGIAPVFKTVDTCAAEFASTTP 541

Query: 627  YMYSSYD----------------FECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTS 670
            Y YS+Y+                   E  P  ++KV+ILGGGPNRIGQGIEFDYCCCH S
Sbjct: 542  YHYSTYERPVRRLTGAGALEALPMASEVQPEDRRKVMILGGGPNRIGQGIEFDYCCCHAS 601

Query: 671  FSLQSAGYETIMMNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQT 730
            FS Q  GY T+M+NSNPETVSTDYDTSDRLYFEPLT+EDVLNVI+ ERPEG+IVQFGGQT
Sbjct: 602  FSAQDGGYATVMVNSNPETVSTDYDTSDRLYFEPLTLEDVLNVIEAERPEGVIVQFGGQT 661

Query: 731  PLKLSLPIHQYLDEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGG 790
            PLKL+LP+  +L       A      RI GTSP+SID AEDRE+F AI++EL I QP+ G
Sbjct: 662  PLKLALPLLDWLSS----DAGRSTGTRILGTSPESIDRAEDREQFEAILRELEIRQPRNG 717

Query: 791  IAKSEADALAIAKEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLID 850
            +A+SE +A ++A+ +GYPVVVRPSYVLGGRAME+V+ ++ L  Y+  AV+V+P+ PVLID
Sbjct: 718  LARSEEEARSVAERVGYPVVVRPSYVLGGRAMEVVFDEQELNRYMVEAVQVEPDHPVLID 777

Query: 851  KYLSDAIEIDVDALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSW 910
            +YL +A+E+DVDAL D    V++GG+MEHIE AG+HSGDSAC +P  ++    L  I  W
Sbjct: 778  QYLENAVEVDVDALCDRENTVLVGGLMEHIEPAGIHSGDSACCLPAVSLGEQALGLIRRW 837

Query: 911  TIKLAKRLNVCGLMNCQYAIT--TSGD--VYLLEANPRASRTVPFVSKAIGHPLAKYAAL 966
            T  LA  L V GL+N Q+A+    SG+  VY++EANPRASRTVPFV+KA G PLA+ A  
Sbjct: 838  TEALAVALKVQGLINLQFAVQRDASGEEIVYIIEANPRASRTVPFVAKATGVPLARIATR 897

Query: 967  VMSGKSLNDLGFTKEVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIA 1026
            +M+G++L ++G T E  P   +VKEAVLPF +F G D +LGPEMRSTGEVMG    F +A
Sbjct: 898  LMTGETLAEVGLTDEPKPPLQAVKEAVLPFRRFPGADSVLGPEMRSTGEVMGSAQDFGMA 957

Query: 1027 FAKAQIAAGQKLPLSGTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIA 1086
            +AKA++AAG  LP SG VFLS +D  K  L  +A+  +++GF++ +TSGTA  L   G+ 
Sbjct: 958  YAKAELAAGDALPTSGRVFLSTHDRDKQALVPVARRLIELGFELTATSGTAAVLTEAGLE 1017

Query: 1087 VERVLKMHEGRPHAGDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSG 1146
            V  VLK+HEGRP+  D++ +G IQ+ + T  G      D   +RR  L Y VP +TT++G
Sbjct: 1018 VSSVLKVHEGRPNIEDLIRSGGIQLAINTPIGRQAAH-DDRYIRRAALDYSVPTVTTLAG 1076

Query: 1147 ALANAEAIRSLKSNTVTMTALQD 1169
            A A  EAI +L++ ++T+ ALQD
Sbjct: 1077 ACAAVEAIAALQAESLTIHALQD 1099


>gi|124023089|ref|YP_001017396.1| carbamoyl phosphate synthase large subunit [Prochlorococcus marinus
            str. MIT 9303]
 gi|123963375|gb|ABM78131.1| carbamoyl-phosphate synthase, large subunit [Prochlorococcus marinus
            str. MIT 9303]
          Length = 1102

 Score = 1379 bits (3570), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 680/1104 (61%), Positives = 852/1104 (77%), Gaps = 27/1104 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            +R+DLR+IL+LG+GPIVIGQACEFDYSGTQACKAL++EG+EV+L+NSNPA+IMTDP +AD
Sbjct: 3    RRSDLRRILLLGSGPIVIGQACEFDYSGTQACKALRDEGFEVVLVNSNPASIMTDPEMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
            RTYI P+TPE+V +V+E ERPDALLPTMGGQTALNLAVALAE+  LE++GVELIGA L A
Sbjct: 63   RTYIEPLTPEVVARVIELERPDALLPTMGGQTALNLAVALAENHTLERFGVELIGADLAA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I+KAEDR LFKQAM+ IGV   PSGI ++L E   +   I  FP IIRPAFTLGG+GGGI
Sbjct: 123  IRKAEDRQLFKQAMERIGVDVCPSGIASSLKEAEEVGEVINSFPRIIRPAFTLGGSGGGI 182

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN EEF AICK+GL AS  SQ+L+EKSLLGWKE+ELEVMRDLADNVVI+CSIEN+D MG
Sbjct: 183  AYNPEEFAAICKSGLDASPVSQILIEKSLLGWKEFELEVMRDLADNVVIVCSIENLDAMG 242

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTD+EYQRLRD SIAIIREIGV  GGSN+QFA+NP DGEV+VIEMN
Sbjct: 243  VHTGDSITVAPAQTLTDREYQRLRDQSIAIIREIGVATGGSNIQFAINPDDGEVVVIEMN 302

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRF 447
            PRVSRSSALASKATGFPIAK+AA+L+VGY+LD+I NDIT KTPA FEP+IDYVVTKIPRF
Sbjct: 303  PRVSRSSALASKATGFPIAKIAARLAVGYTLDEIINDITGKTPACFEPTIDYVVTKIPRF 362

Query: 448  AFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDWE 507
            AFEKF GS  +L+T MKSVGEAMA+GR F+ESFQKA+RSLE G +GWGC   +E +    
Sbjct: 363  AFEKFKGSPAVLSTAMKSVGEAMAIGRCFEESFQKAMRSLEIGRAGWGCDR-QEPELTPT 421

Query: 508  QLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVE-QFLLTQSV 566
            +++  LR P+P+R+ A+  AM  G    +I+ LS ID WFL + + LI++E   +  + +
Sbjct: 422  EIERLLRTPSPERIMAVRTAMLAGRSDQDIYALSKIDIWFLAKLRHLINIETTHMHGRKL 481

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
              + ++    +K+ G+SD+QIA+AT S E  VR +R  L + P +K VDTCAAEF + TP
Sbjct: 482  DELDQECLLSLKQLGYSDRQIAWATGSEELAVRARRELLNIKPVFKTVDTCAAEFSSTTP 541

Query: 627  YMYSSYDF----------------ECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTS 670
            Y YS+Y+                 E E    ++ KV+ILGGGPNRIGQGIEFDYCCCH S
Sbjct: 542  YHYSTYERPLYRLDSDDQLYKLEPESEVVADERSKVMILGGGPNRIGQGIEFDYCCCHAS 601

Query: 671  FSLQSAGYETIMMNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQT 730
            F+ Q  G+ T+M+NSNPETVSTDYDTSDRLYFEPLT+EDVLNVI+ ERP G+IVQFGGQT
Sbjct: 602  FAAQDKGFVTVMVNSNPETVSTDYDTSDRLYFEPLTLEDVLNVIEAERPNGVIVQFGGQT 661

Query: 731  PLKLSLPIHQYLDEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGG 790
            PLKL++P+ ++L E  +  ++G    RIWGTSP+SID AEDRE+F AI+++L I QP+ G
Sbjct: 662  PLKLAIPLLRWL-ESSIGKSTG---TRIWGTSPESIDQAEDREQFEAILRQLQIRQPRNG 717

Query: 791  IAKSEADALAIAKEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLID 850
            +A+SE DA A+A  IGYPVVVRPSYVLGGRAME+V+ ++ L  Y+  AV+V+P+ PVLID
Sbjct: 718  LARSEEDARAVALRIGYPVVVRPSYVLGGRAMEVVFDEQELNRYMAEAVQVEPDHPVLID 777

Query: 851  KYLSDAIEIDVDALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSW 910
            +YL +A+E+DVDAL DS G VVIGG+MEHIE AG+HSGDSAC +P+ ++    L TI  W
Sbjct: 778  QYLENAVEVDVDALCDSDGVVVIGGLMEHIEPAGIHSGDSACCLPSISLGEQALRTIRLW 837

Query: 911  TIKLAKRLNVCGLMNCQYAITT--SGD--VYLLEANPRASRTVPFVSKAIGHPLAKYAAL 966
            +  LA  L V GL+N Q+A+    +GD  V+++EANPRASRTVPFV+KA G PLA+ A  
Sbjct: 838  SEALALALKVQGLINLQFAVQRDEAGDEQVFIIEANPRASRTVPFVAKATGVPLARIATR 897

Query: 967  VMSGKSLNDLGFTKEVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIA 1026
            +M+G++L  +G T E  P   SVKEAVLPF +F G D +LGPEMRSTGEVMG   SF +A
Sbjct: 898  IMAGETLAAVGLTHEPQPPLQSVKEAVLPFRRFPGADSVLGPEMRSTGEVMGSASSFGMA 957

Query: 1027 FAKAQIAAGQKLPLSGTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIA 1086
            FAK++IAAG  LP+ GTVFLS +D  KP L  +A+  +++GF + +TSGTA  L   G+ 
Sbjct: 958  FAKSEIAAGDPLPIRGTVFLSTHDRDKPALLLVAERLIELGFDLTATSGTAQALNQAGLN 1017

Query: 1087 VERVLKMHEGRPHAGDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSG 1146
            V+ VLK+HEGRP+  D++ +GQIQ+++ T  G      D   LRR  L Y VP +TT++G
Sbjct: 1018 VQPVLKVHEGRPNIEDLIRSGQIQLVINTPIGRQAAH-DDKYLRRAALDYSVPTLTTIAG 1076

Query: 1147 ALANAEAIRSLKSNTVTMTALQDF 1170
            A A  E I +L+  ++++ ALQD 
Sbjct: 1077 ARAAVEGITALQQQSLSVAALQDI 1100


>gi|194477256|ref|YP_002049435.1| carbamoyl-phosphate synthase, large subunit [Paulinella
            chromatophora]
 gi|171192263|gb|ACB43225.1| carbamoyl-phosphate synthase, large subunit [Paulinella
            chromatophora]
          Length = 1100

 Score = 1379 bits (3569), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 687/1101 (62%), Positives = 843/1101 (76%), Gaps = 26/1101 (2%)

Query: 89   RTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLADR 148
            R+DLR+IL+LG+GPIVIGQACEFDYSGTQACKAL+ EGYEV+LINSNPA+IMTDP +ADR
Sbjct: 4    RSDLRRILLLGSGPIVIGQACEFDYSGTQACKALRAEGYEVVLINSNPASIMTDPDMADR 63

Query: 149  TYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDAI 208
            TYI P+TPE+V +V+E ERPDALLPTMGGQTALNLAV LA  G LE++GVELIGA L AI
Sbjct: 64   TYIEPLTPEVVTRVIELERPDALLPTMGGQTALNLAVTLARVGILERFGVELIGANLQAI 123

Query: 209  KKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGIA 268
            +KAEDR LFKQAM+ I V   PSGI + L+E   +   IG +P IIRPAFTLGG+GGGIA
Sbjct: 124  QKAEDRLLFKQAMERIEVHVCPSGIASNLEEAKEVGETIGSYPRIIRPAFTLGGSGGGIA 183

Query: 269  YNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMGV 328
            YN EEF AICK GL AS  SQ+L+E+SLLGWKE+ELEVMRD ADNVVIICSIEN+DPMGV
Sbjct: 184  YNPEEFFAICKEGLEASPVSQILIEQSLLGWKEFELEVMRDTADNVVIICSIENLDPMGV 243

Query: 329  HTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMNP 388
            HTGDSITVAPAQTLTD+EYQRLRD SIAIIREIGV+ GGSN+QFA+NPVDGEV+VIEMNP
Sbjct: 244  HTGDSITVAPAQTLTDREYQRLRDQSIAIIREIGVDTGGSNIQFAINPVDGEVVVIEMNP 303

Query: 389  RVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRFA 448
            RVSRSSALASKATGFPIAK+AA+L+VGY+LD+I NDIT KTPA FEP+IDYVVTKIPRFA
Sbjct: 304  RVSRSSALASKATGFPIAKIAARLAVGYTLDEILNDITGKTPACFEPTIDYVVTKIPRFA 363

Query: 449  FEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDWEQ 508
            FEKF  S  +LTT MKSVGEAMA+GR F+ESFQKA+RSLE G SGWGC    +L ++   
Sbjct: 364  FEKFRSSPAVLTTSMKSVGEAMAIGRCFEESFQKAMRSLETGLSGWGCDQSDQL-FESSN 422

Query: 509  LKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLT-QSVS 567
            L+  LR+P+PDR+ A+  AM  G    +IH LS ID WFL + + LID+E  LL  +S+S
Sbjct: 423  LERRLRIPSPDRIMAVREAMLIGRSNIDIHRLSSIDPWFLAKLRRLIDIEISLLRGKSLS 482

Query: 568  NMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTPY 627
            ++       VK+ GFSDKQIA+ T S E  VR  R  LG+   +K VDTCAAEF ++TPY
Sbjct: 483  SLNAMSLLIVKQMGFSDKQIAWQTNSDELTVRRYRQKLGINAVFKTVDTCAAEFASSTPY 542

Query: 628  MYSSYD----------------FECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSF 671
             YS+Y+                   E  P  ++KV+ILGGGPNRIGQGIEFDYCCCH SF
Sbjct: 543  HYSTYERPLEKLDISGHLVPFVMANEVLPETRRKVMILGGGPNRIGQGIEFDYCCCHASF 602

Query: 672  SLQSAGYETIMMNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTP 731
            +LQ+ G+ TIMMNSNPETVSTDYDTSDRLYFEPLT EDVLNVI++E+PEGI++QFGGQTP
Sbjct: 603  ALQAEGFSTIMMNSNPETVSTDYDTSDRLYFEPLTFEDVLNVIEVEKPEGIVIQFGGQTP 662

Query: 732  LKLSLPIHQYLDEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGI 791
            LKL++P+  +L      SA+G    +IWGTSP SID AEDRE+F AI+++L+I QP+ G+
Sbjct: 663  LKLAMPLLNWLVSEE-GSATG---TKIWGTSPKSIDLAEDREQFEAILRQLNIRQPRNGL 718

Query: 792  AKSEADALAIAKEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDK 851
            A+SE++AL +A  +GYPVVVRPSYVLGGRAME+V+    L  Y+  AV+V+P  PVLID+
Sbjct: 719  ARSESEALLVADNVGYPVVVRPSYVLGGRAMEVVFDKADLKRYINEAVKVEPNHPVLIDQ 778

Query: 852  YLSDAIEIDVDALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWT 911
            YL ++IE+DVDA+ D    VVIGG+MEHIE AG+HSGDSAC +P  ++S+  LD I  W+
Sbjct: 779  YLENSIEVDVDAICDINQQVVIGGLMEHIEPAGIHSGDSACCLPAISLSNKTLDIIREWS 838

Query: 912  IKLAKRLNVCGLMNCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGK 971
              LA  L V GL+N Q+A+     VY++EANPRASRT+PFV+KA G PLA+ A+ +MSG 
Sbjct: 839  KDLAIALEVNGLINLQFAVQGE-QVYIIEANPRASRTIPFVAKATGVPLARIASQLMSGI 897

Query: 972  SLNDLGFTKEVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQ 1031
            SL+++G   E  P   +VKEAV PF++F G D +LGPEMRSTGEVMG   SF +A+AKA+
Sbjct: 898  SLSEIGLMSEPQPPLQAVKEAVFPFKRFPGTDTVLGPEMRSTGEVMGTASSFGLAYAKAE 957

Query: 1032 IAAGQKLPLSGTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVL 1091
            +AAG+ LP  G VFLS +D  K  L  +A   +++GF I++TSGTA  L   G+ VE +L
Sbjct: 958  LAAGEILPTEGMVFLSTHDRDKQDLVPVAHCLINLGFSIMATSGTAAVLTKAGLEVESIL 1017

Query: 1092 KMHEGRPHAGDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANA 1151
            K+HEGRP+  D + +G+IQ+++ T  G   +  D   LRR  L Y VP +TT++GA A  
Sbjct: 1018 KVHEGRPNVEDAIRSGRIQLVINTPIGRQANY-DDKYLRRAALDYSVPTVTTLAGARAVV 1076

Query: 1152 EAIRSLKSNTVT--MTALQDF 1170
            EAI SL+       +TALQD 
Sbjct: 1077 EAIMSLQLQLQQLPVTALQDI 1097


>gi|78213340|ref|YP_382119.1| carbamoyl phosphate synthase large subunit [Synechococcus sp. CC9605]
 gi|78197799|gb|ABB35564.1| carbamoyl-phosphate synthase, large subunit [Synechococcus sp.
            CC9605]
          Length = 1107

 Score = 1377 bits (3565), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 677/1112 (60%), Positives = 855/1112 (76%), Gaps = 33/1112 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            +R+DLR+IL+LG+GPIVIGQACEFDYSGTQACKAL+ E +EVILINSNPA+IMTDP +AD
Sbjct: 3    RRSDLRRILLLGSGPIVIGQACEFDYSGTQACKALRAEEFEVILINSNPASIMTDPEMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
            RTYI P+TP++V +V+EKERPDALLPTMGGQTALNLAV LAE+G LE++GVELIGA L A
Sbjct: 63   RTYIEPLTPDVVTRVIEKERPDALLPTMGGQTALNLAVTLAENGTLERFGVELIGADLKA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I+KAEDR LFKQAM+ IGVK  PSGI ++ +E  ++   IG FP IIRPAFTLGG+GGGI
Sbjct: 123  IQKAEDRLLFKQAMERIGVKVCPSGIASSQEEAEAVGAAIGSFPRIIRPAFTLGGSGGGI 182

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN EE+ AICK+GL AS  SQ+L+E+SLLGWKE+ELEVMRDLADNVVI+CSIEN+DPMG
Sbjct: 183  AYNPEEYAAICKSGLEASPVSQILIEQSLLGWKEFELEVMRDLADNVVIVCSIENLDPMG 242

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTD+EYQRLRD SIAIIREIGV  GGSN+QFA+NP +G+V+VIEMN
Sbjct: 243  VHTGDSITVAPAQTLTDREYQRLRDQSIAIIREIGVATGGSNIQFAINPDNGDVVVIEMN 302

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRF 447
            PRVSRSSALASKATGFPIAK+AA+L+VGY LD+I NDIT KTPA FEP+IDYVVTKIPRF
Sbjct: 303  PRVSRSSALASKATGFPIAKIAARLAVGYILDEILNDITGKTPACFEPTIDYVVTKIPRF 362

Query: 448  AFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDWE 507
            AFEKF GS  +LTT MKSVGEAMA+GR F+ESFQKA+RSLE GFSGWG  + +E +    
Sbjct: 363  AFEKFRGSPAVLTTSMKSVGEAMAIGRCFEESFQKAMRSLETGFSGWG-GDREEPELTDG 421

Query: 508  QLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLT-QSV 566
            +L   LR P+P+R+ ++  AM +G   +EIH++S ID WFL + + +I+ E  L+  +S+
Sbjct: 422  ELDRQLRTPSPERILSVRTAMVRGRSDEEIHQISRIDPWFLAKLRRIIEAEARLIKGKSL 481

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
              +  D  +E K+ GFSD+QIA+ T S E  VR++R  L V   +K VDTCAAEF ++TP
Sbjct: 482  DQLDADSLFEAKQLGFSDRQIAWHTNSDELSVRQRRHQLEVRAVFKTVDTCAAEFASSTP 541

Query: 627  YMYSSYDFECES-----------APTQ------KKKVLILGGGPNRIGQGIEFDYCCCHT 669
            Y YSSY+   ++           A T+       +K++ILGGGPNRIGQGIEFDYCCCH 
Sbjct: 542  YHYSSYERPLQTLQADGSLKPLPASTEVSRREGGRKMMILGGGPNRIGQGIEFDYCCCHA 601

Query: 670  SFSLQSAGYETIMMNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQ 729
            SF+ Q  G  T+M+NSNPETVSTDYDTSD LYFEPLT+EDVLNVI+ ERP+G++VQFGGQ
Sbjct: 602  SFAGQDQGITTVMVNSNPETVSTDYDTSDSLYFEPLTLEDVLNVIEAERPDGVVVQFGGQ 661

Query: 730  TPLKLSLPIHQYL--DEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQP 787
            TPLKL++P+ ++L  DE R    S      IWGTSP+SID AEDRE+F AI+++L+I QP
Sbjct: 662  TPLKLAIPLLRWLDSDEGRATGTS------IWGTSPESIDRAEDREQFEAILRDLNIRQP 715

Query: 788  KGGIAKSEADALAIAKEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPV 847
            + G+A+SE +A A+A  +GYPVVVRPSYVLGGRAME+V+ +E L  Y+  AV+V+P+ PV
Sbjct: 716  RNGLARSEEEARAVATRVGYPVVVRPSYVLGGRAMEVVFDEEELNRYMREAVQVEPDHPV 775

Query: 848  LIDKYLSDAIEIDVDALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTI 907
            LID+YL +A+E+DVDAL D  G V++GG+MEHIE AG+HSGDSAC +P  ++  + L+TI
Sbjct: 776  LIDQYLDNAVEVDVDALCDHTGAVIVGGLMEHIEPAGIHSGDSACCLPAVSLGEAALNTI 835

Query: 908  SSWTIKLAKRLNVCGLMNCQYAITTSGD----VYLLEANPRASRTVPFVSKAIGHPLAKY 963
              W+  LA+ L V GL+N Q+A+  + D    VY++EANPRASRTVPFV+KA G PLA+ 
Sbjct: 836  REWSRSLAQTLEVRGLINLQFAVQRNTDGSEVVYIIEANPRASRTVPFVAKATGQPLARL 895

Query: 964  AALVMSGKSLNDLGFTKEVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSF 1023
            A  +M+G++L D+G T E  P   S+KEAVLPF +F G D +LGPEMRSTGEVMG   SF
Sbjct: 896  ATRLMAGETLTDIGMTSEPKPPLQSIKEAVLPFRRFPGADTVLGPEMRSTGEVMGSANSF 955

Query: 1024 PIAFAKAQIAAGQKLPLSGTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELK 1083
              A+AKA++ AG+ LP  GTVFLS +D  K  L  IA   +++GF + +TSGTA  L   
Sbjct: 956  GAAYAKAELGAGEALPTQGTVFLSTHDRDKQALVPIAARLIELGFDVTATSGTAQALANA 1015

Query: 1084 GIAVERVLKMHEGRPHAGDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITT 1143
            G+ V+ VLK+HEGRP+  D + + Q+Q+++ T  G      D   LRR  L Y VP +TT
Sbjct: 1016 GLKVQSVLKVHEGRPNIEDQIRSNQVQLVINTPIGRQAAH-DDKYLRRAALDYAVPTVTT 1074

Query: 1144 VSGALANAEAIRSLKSN-TVTMTALQDFFDVE 1174
            ++GA A  EAI +L+    +++ ALQD   ++
Sbjct: 1075 LAGARAAVEAISALQQQPRLSIHALQDVHAIQ 1106



 Score =  224 bits (570), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 131/405 (32%), Positives = 222/405 (54%), Gaps = 16/405 (3%)

Query: 85  KLGKRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPG 144
           ++ +R   RK++ILG GP  IGQ  EFDY    A  A +++G   +++NSNP T+ TD  
Sbjct: 568 EVSRREGGRKMMILGGGPNRIGQGIEFDYCCCHASFAGQDQGITTVMVNSNPETVSTDYD 627

Query: 145 LADRTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVAL---AESGALEKYGVELI 201
            +D  Y  P+T E V  V+E ERPD ++   GGQT L LA+ L    +S      G  + 
Sbjct: 628 TSDSLYFEPLTLEDVLNVIEAERPDGVVVQFGGQTPLKLAIPLLRWLDSDEGRATGTSIW 687

Query: 202 GAKLDAIKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLG 261
           G   ++I +AEDR+ F+  ++ + ++ P +G+  + +E  ++A  +G +P+++RP++ LG
Sbjct: 688 GTSPESIDRAEDREQFEAILRDLNIRQPRNGLARSEEEARAVATRVG-YPVVVRPSYVLG 746

Query: 262 GTGGGIAYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIE 321
           G    + +++EE     +  +       VL+++ L    E +++ + D    V++   +E
Sbjct: 747 GRAMEVVFDEEELNRYMREAVQVEPDHPVLIDQYLDNAVEVDVDALCDHTGAVIVGGLME 806

Query: 322 NVDPMGVHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVN-PVDGE 380
           +++P G+H+GDS    PA +L +     +R++S ++ + + V  G  N+QFAV    DG 
Sbjct: 807 HIEPAGIHSGDSACCLPAVSLGEAALNTIREWSRSLAQTLEVR-GLINLQFAVQRNTDGS 865

Query: 381 --VMVIEMNPRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSID 438
             V +IE NPR SR+    +KATG P+A++A +L  G +L  I      K P     SI 
Sbjct: 866 EVVYIIEANPRASRTVPFVAKATGQPLARLATRLMAGETLTDIGMTSEPKPPLQ---SIK 922

Query: 439 YVVTKIPRFAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKA 483
             V       F +FPG++ +L  +M+S GE M    +F  ++ KA
Sbjct: 923 EAV-----LPFRRFPGADTVLGPEMRSTGEVMGSANSFGAAYAKA 962


>gi|33863094|ref|NP_894654.1| carbamoyl phosphate synthase large subunit [Prochlorococcus marinus
            str. MIT 9313]
 gi|33635011|emb|CAE20997.1| carbamoyl-phosphate synthase, large subunit [Prochlorococcus marinus
            str. MIT 9313]
          Length = 1102

 Score = 1376 bits (3561), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 679/1104 (61%), Positives = 851/1104 (77%), Gaps = 27/1104 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            +R+DLR+IL+LG+GPIVIGQACEFDYSGTQACKAL++EG+EV+L+NSNPA+IMTDP +AD
Sbjct: 3    RRSDLRRILLLGSGPIVIGQACEFDYSGTQACKALRDEGFEVVLVNSNPASIMTDPEMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
            RTYI P+TPE+V +V+E ERPDALLPTMGGQTALNLAV LAE+  LE++GVELIGA L A
Sbjct: 63   RTYIEPLTPEVVTRVIELERPDALLPTMGGQTALNLAVELAENHTLERFGVELIGADLAA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I+KAEDR LFKQAM+ IGV   PSGI ++L E   +   I  FP IIRPAFTLGG+GGGI
Sbjct: 123  IRKAEDRQLFKQAMERIGVNVCPSGIASSLKEAEEVGEVINSFPRIIRPAFTLGGSGGGI 182

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN EEF AICK+GL AS  SQ+L+EKSLLGWKE+ELEVMRDLADNVVI+CSIEN+D MG
Sbjct: 183  AYNPEEFAAICKSGLDASPVSQILIEKSLLGWKEFELEVMRDLADNVVIVCSIENLDAMG 242

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTD+EYQRLRD SIAIIREIGV  GGSN+QFA+NP DGEV+VIEMN
Sbjct: 243  VHTGDSITVAPAQTLTDREYQRLRDQSIAIIREIGVATGGSNIQFAINPDDGEVVVIEMN 302

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRF 447
            PRVSRSSALASKATGFPIAK+AA+L+VGY+LD+I NDIT KTPA FEP+IDYVVTKIPRF
Sbjct: 303  PRVSRSSALASKATGFPIAKIAARLAVGYTLDEIINDITGKTPACFEPTIDYVVTKIPRF 362

Query: 448  AFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDWE 507
            AFEKF GS  +L+T MKSVGEAMA+GR F+ESFQKA+RSLE G +GWGC   +E ++   
Sbjct: 363  AFEKFKGSPAVLSTAMKSVGEAMAIGRCFEESFQKAMRSLEIGRAGWGCDR-QEPEFTPT 421

Query: 508  QLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVE-QFLLTQSV 566
            +++  LR P+P+R+ A+  AM  G    +I+ LS ID WFL + + +I++E   L  +++
Sbjct: 422  EIERLLRTPSPERIMAVRTAMLAGRSDHDIYALSKIDIWFLAKLRHMINIETTHLHGRTL 481

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
              + +     +K+ G+SD+QIA+AT S E  VR +R  L + P +K VDTCAAEF + TP
Sbjct: 482  DELDQQSLLCLKQLGYSDRQIAWATGSEELAVRARRELLNIKPVFKTVDTCAAEFSSTTP 541

Query: 627  YMYSSYDF----------------ECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTS 670
            Y YS+Y+                 E E     + KV+ILGGGPNRIGQGIEFDYCCCH S
Sbjct: 542  YHYSTYERPLYRLDSDDQLYKLEPESEVVTDNRAKVMILGGGPNRIGQGIEFDYCCCHAS 601

Query: 671  FSLQSAGYETIMMNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQT 730
            F+ Q  G+ T+M+NSNPETVSTDYDTSDRLYFEPLT+EDVLNVI+ ERP G+IVQFGGQT
Sbjct: 602  FASQDKGFVTVMVNSNPETVSTDYDTSDRLYFEPLTLEDVLNVIEAERPNGVIVQFGGQT 661

Query: 731  PLKLSLPIHQYLDEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGG 790
            PLKL++P+ ++L E  +  ++G    RIWGTSP+SID AEDRE+F AI+++L I QP+ G
Sbjct: 662  PLKLAIPLLRWL-ESSIGKSTG---TRIWGTSPESIDRAEDREQFEAILRQLQIRQPRNG 717

Query: 791  IAKSEADALAIAKEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLID 850
            +A+SE DA A+A  IGYPVVVRPSYVLGGRAME+V+ ++ L  Y+  AV+V+P+ PVLID
Sbjct: 718  LARSEKDARAVALRIGYPVVVRPSYVLGGRAMEVVFDEQELNRYMAEAVQVEPDHPVLID 777

Query: 851  KYLSDAIEIDVDALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSW 910
            +YL +A+E+DVDAL DS G VVIGG+MEHIE AG+HSGDSAC +P+ ++    L TI  W
Sbjct: 778  QYLENAVEVDVDALCDSDGVVVIGGLMEHIEPAGIHSGDSACCLPSISLGEQALRTIRLW 837

Query: 911  TIKLAKRLNVCGLMNCQYAITT--SGD--VYLLEANPRASRTVPFVSKAIGHPLAKYAAL 966
            +  LA  L V GL+N Q+A+    +GD  V+++EANPRASRTVPFV+KA G PLA+ A  
Sbjct: 838  SEALALALKVQGLINLQFAVQRDEAGDEQVFIIEANPRASRTVPFVAKATGVPLARIATR 897

Query: 967  VMSGKSLNDLGFTKEVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIA 1026
            +M+G++L  +G T E  P   SVKEAVLPF +F G D +LGPEMRSTGEVMG   SF +A
Sbjct: 898  LMAGETLAAIGLTHEPQPPLQSVKEAVLPFRRFPGADSVLGPEMRSTGEVMGSASSFGMA 957

Query: 1027 FAKAQIAAGQKLPLSGTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIA 1086
            FAK++IAAG  LP+ GTVFLS +D  KP L  +A+  +++GF + +TSGTA  L   G+ 
Sbjct: 958  FAKSEIAAGDSLPIRGTVFLSTHDRDKPALILVAERLIELGFDLTATSGTAQALNRAGLN 1017

Query: 1087 VERVLKMHEGRPHAGDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSG 1146
            V+ VLK+HEGRP+  D++ +GQIQ+++ T  G      D   LRR  L Y VP +TT++G
Sbjct: 1018 VQPVLKVHEGRPNIEDLIRSGQIQLVINTPIGRQAAH-DDKYLRRAALDYSVPTLTTIAG 1076

Query: 1147 ALANAEAIRSLKSNTVTMTALQDF 1170
            A A  E I +L+  ++++ ALQD 
Sbjct: 1077 ARAAVEGITALQQQSLSVAALQDI 1100


>gi|148242079|ref|YP_001227236.1| carbamoyl phosphate synthase large subunit [Synechococcus sp. RCC307]
 gi|147850389|emb|CAK27883.1| Carbamoylphosphate synthase large subunit [Synechococcus sp. RCC307]
          Length = 1100

 Score = 1375 bits (3560), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 672/1102 (60%), Positives = 847/1102 (76%), Gaps = 27/1102 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            +RTDLR+IL+LG+GPIVIGQACEFDYSGTQACKAL+ +G+EV+L+NSNPA+IMTDP +AD
Sbjct: 3    RRTDLRRILLLGSGPIVIGQACEFDYSGTQACKALRADGFEVVLVNSNPASIMTDPEMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
            RTYI P+TP++V +V+E E+PDALLPTMGGQTALNLAV+LA+ G LE++GVELIGA L A
Sbjct: 63   RTYIEPLTPDVVRRVIELEKPDALLPTMGGQTALNLAVSLAKDGTLERHGVELIGANLAA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I+KAEDRDLFKQAM+ IGV   PSGI  +++E  ++ N+IG +P IIRPAFTLGG+GGGI
Sbjct: 123  IEKAEDRDLFKQAMERIGVGVCPSGIATSMEEAEAVGNQIGSYPRIIRPAFTLGGSGGGI 182

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN EEF A+C +GL AS   Q+L+EKSLLGWKE+ELEVMRD ADNVVIICSIEN+DPMG
Sbjct: 183  AYNPEEFRALCNSGLEASPVDQILIEKSLLGWKEFELEVMRDTADNVVIICSIENLDPMG 242

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTD+EYQRLRD S+AIIREIGV+ GGSN+QFA+NP +G+V+VIEMN
Sbjct: 243  VHTGDSITVAPAQTLTDREYQRLRDQSLAIIREIGVDTGGSNIQFAINPANGDVVVIEMN 302

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRF 447
            PRVSRSSALASKATGFPIAK+AA+L+VGY LD+I NDIT KTPA FEP+IDYVVTK+PRF
Sbjct: 303  PRVSRSSALASKATGFPIAKIAARLAVGYRLDEIINDITGKTPACFEPTIDYVVTKVPRF 362

Query: 448  AFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDWE 507
            AFEKF GS  +LTT MKSVGEAMA+GR F+ESFQKALRSLE G +GWG ++  E +    
Sbjct: 363  AFEKFSGSSSVLTTSMKSVGEAMAIGRCFEESFQKALRSLETGHAGWG-ADRAEANPSEG 421

Query: 508  QLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLT-QSV 566
             L  +LR P P+R+ ++  A+ +G  ++++H LS ID WFL +   ++  EQ LL  +S+
Sbjct: 422  DLDANLRTPTPERIFSVRTALLRGRSIEQVHALSAIDPWFLAKLAAMLHREQALLQGRSL 481

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
            + +  +   E+K+ G+SD+QI + T S E  VR  R  LG+   +K VDTCAAEF + TP
Sbjct: 482  NELNAEALLELKQLGYSDRQIGWCTGSDELAVRAHRQGLGINAVFKTVDTCAAEFASTTP 541

Query: 627  YMYSSYDF----------------ECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTS 670
            Y YSSY+                 + E AP  ++KV+ILGGGPNRIGQGIEFDYCCCH S
Sbjct: 542  YHYSSYERPVERLNAAGQLEVLAPQTEVAPESRRKVMILGGGPNRIGQGIEFDYCCCHAS 601

Query: 671  FSLQSAGYETIMMNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQT 730
            F+LQ  G  T+M+NSNPETVSTDYDTSDRLYFEPLT+EDVLNVI+ ERP+G+IVQFGGQT
Sbjct: 602  FALQDEGLATVMVNSNPETVSTDYDTSDRLYFEPLTLEDVLNVIEAERPDGVIVQFGGQT 661

Query: 731  PLKLSLPIHQYLDEHRLPSASGDGL-VRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKG 789
            PLKL+LP+ ++L+     SA G     RIWGTSP SID AEDRE+F  ++++L I QP  
Sbjct: 662  PLKLALPLLRWLE-----SAQGQTTGCRIWGTSPQSIDLAEDREQFEGVLRKLQIRQPAN 716

Query: 790  GIAKSEADALAIAKEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLI 849
            GIA+SE +A AIA+ IGYPVVVRPSYVLGGRAME+V+  + L  Y+  AV+VDP++PVLI
Sbjct: 717  GIARSEDEARAIAERIGYPVVVRPSYVLGGRAMEVVFGADELDRYMREAVQVDPDQPVLI 776

Query: 850  DKYLSDAIEIDVDALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISS 909
            D+YL +A E+DVDAL D  G VVIGG+MEHIE AG+HSGDSAC +P+ ++    L TI  
Sbjct: 777  DQYLENATEVDVDALCDESGQVVIGGLMEHIEPAGIHSGDSACCLPSVSLKPEALATIRQ 836

Query: 910  WTIKLAKRLNVCGLMNCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMS 969
            W+  LA+ L V GL+N Q+A+    +VY++EANPRASRTVPFV+KA G PLAK A+ +M+
Sbjct: 837  WSADLARSLQVQGLINLQFAVCQD-EVYIIEANPRASRTVPFVAKATGVPLAKLASRLMA 895

Query: 970  GKSLNDLGFTKEVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAK 1029
            G+SL  LG  +E  P   ++KEAVLPF +F G D +LGPEMRSTGEVMG   +F +A+AK
Sbjct: 896  GRSLEQLGLQQEPKPPLQAIKEAVLPFRRFPGSDTVLGPEMRSTGEVMGTASNFGMAYAK 955

Query: 1030 AQIAAGQKLPLSGTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVER 1089
            A++AAG+ LP  GTVFLS +D  K  L  +A    + GF++++T GTA +L   G+ V+ 
Sbjct: 956  AELAAGEVLPTKGTVFLSTHDRDKEALVEVAGKLQEQGFELIATEGTAKYLCSNGLKVKP 1015

Query: 1090 VLKMHEGRPHAGDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALA 1149
            VLK+HEGRP+  D + + Q+QM++ T  G      D   LRR  L Y+VP +TT++GA A
Sbjct: 1016 VLKVHEGRPNIEDAIRSDQVQMIINTPIGRQAAH-DDRYLRRAALDYRVPTVTTLAGARA 1074

Query: 1150 NAEAIRSL-KSNTVTMTALQDF 1170
              EA+  L + N + + ALQD 
Sbjct: 1075 AVEAVGCLQRQNDLPINALQDL 1096


>gi|260436465|ref|ZP_05790435.1| carbamoyl-phosphate synthase, large subunit [Synechococcus sp. WH
            8109]
 gi|260414339|gb|EEX07635.1| carbamoyl-phosphate synthase, large subunit [Synechococcus sp. WH
            8109]
          Length = 1107

 Score = 1373 bits (3553), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 675/1107 (60%), Positives = 849/1107 (76%), Gaps = 33/1107 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            +R+DLR+IL+LG+GPIVIGQACEFDYSGTQA KAL+ EG+EVILINSNPA+IMTDP +AD
Sbjct: 3    RRSDLRRILLLGSGPIVIGQACEFDYSGTQAIKALRAEGFEVILINSNPASIMTDPEMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
            RTYI P+TP++V +V+EKERPDALLPTMGGQTALNLAV LAE+G LE++GVELIGA L A
Sbjct: 63   RTYIEPLTPDVVTRVIEKERPDALLPTMGGQTALNLAVTLAENGTLERFGVELIGADLKA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I+KAEDR LFKQAM+ IGVK  PSGI ++ +E  ++   IG FP IIRPAFTLGG+GGGI
Sbjct: 123  IQKAEDRLLFKQAMERIGVKVCPSGIASSQEEAEAVGAAIGSFPRIIRPAFTLGGSGGGI 182

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN EE+ AICK+GL AS  SQ+L+E+SLLGWKE+ELEVMRDLADNVVI+CSIEN+DPMG
Sbjct: 183  AYNPEEYAAICKSGLEASPVSQILIEQSLLGWKEFELEVMRDLADNVVIVCSIENLDPMG 242

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTD+EYQRLRD SIAIIREIGV  GGSN+QFA+NP +G+V+VIEMN
Sbjct: 243  VHTGDSITVAPAQTLTDREYQRLRDQSIAIIREIGVATGGSNIQFAINPDNGDVVVIEMN 302

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRF 447
            PRVSRSSALASKATGFPIAK+AA+L+VGY+LD+I NDIT KTPA FEP+IDYVVTKIPRF
Sbjct: 303  PRVSRSSALASKATGFPIAKIAARLAVGYTLDEILNDITGKTPACFEPTIDYVVTKIPRF 362

Query: 448  AFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDWE 507
            AFEKF GS  +LTT MKSVGEAMA+GR F+ESFQKA+RSLE GFSGWG  + +E +    
Sbjct: 363  AFEKFRGSPAVLTTSMKSVGEAMAIGRCFEESFQKAMRSLETGFSGWG-GDREEPELTDG 421

Query: 508  QLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLT-QSV 566
            +L   LR P+P+R+ ++  AM +G   +EIH +S ID WFL + + +I+ E  L+  +S+
Sbjct: 422  ELDRQLRTPSPERILSVRTAMVRGRSDEEIHRISRIDPWFLAKLRRIIEAEARLIKGKSL 481

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
              +  D   E K+ GFSD+QIA+ TKS E  VR++R  L V   +K VDTCAAEF ++TP
Sbjct: 482  DQLDADSLLEAKQLGFSDRQIAWHTKSDELSVRQRRHQLDVRAVFKTVDTCAAEFASSTP 541

Query: 627  YMYSSYDFECE-----------------SAPTQKKKVLILGGGPNRIGQGIEFDYCCCHT 669
            Y YS+Y+   +                 S     +K++ILGGGPNRIGQGIEFDYCCCH 
Sbjct: 542  YHYSTYERPLQTLQADGSLKPLPASSEVSRRDDGRKMMILGGGPNRIGQGIEFDYCCCHA 601

Query: 670  SFSLQSAGYETIMMNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQ 729
            SF+ Q  G  T+M+NSNPETVSTDYDTSD LYFEPLT+EDVLNVI+ E P+G++VQFGGQ
Sbjct: 602  SFAGQDQGITTVMVNSNPETVSTDYDTSDSLYFEPLTLEDVLNVIEAEVPDGVVVQFGGQ 661

Query: 730  TPLKLSLPIHQYL--DEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQP 787
            TPLKL++P+ ++L  DE R    S      IWGTSP+SID AEDRE+F AI++ L+I QP
Sbjct: 662  TPLKLAIPLLRWLDSDEGRATGTS------IWGTSPESIDQAEDREQFEAILRNLNIRQP 715

Query: 788  KGGIAKSEADALAIAKEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPV 847
            + G+A+SE +A A+A  +GYPVVVRPSYVLGGRAME+V+ +E L  Y+  AV+V+P+ PV
Sbjct: 716  RNGLARSEEEARAVATRVGYPVVVRPSYVLGGRAMEVVFDEEELNRYMREAVQVEPDHPV 775

Query: 848  LIDKYLSDAIEIDVDALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTI 907
            LID+YL +A+E+DVDAL D  G V++GG+MEHIE AG+HSGDSAC +P  ++  + L+TI
Sbjct: 776  LIDQYLENAVEVDVDALCDHTGAVIVGGLMEHIEPAGIHSGDSACCLPAVSLGEAALNTI 835

Query: 908  SSWTIKLAKRLNVCGLMNCQYAITTSGD----VYLLEANPRASRTVPFVSKAIGHPLAKY 963
              W+  LA+ L V GL+N Q+A+  + D    VY++EANPRASRTVPFV+KA G PLA+ 
Sbjct: 836  RDWSRSLAQTLEVRGLINLQFAVQRNTDGSEVVYIIEANPRASRTVPFVAKATGQPLARL 895

Query: 964  AALVMSGKSLNDLGFTKEVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSF 1023
            A  +M+G++L D+G T E  P   S+KEAVLPF +F G D +LGPEMRSTGEVMG   SF
Sbjct: 896  ATRLMAGETLTDIGMTSEPKPPLQSIKEAVLPFRRFPGADTVLGPEMRSTGEVMGSADSF 955

Query: 1024 PIAFAKAQIAAGQKLPLSGTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELK 1083
             +A+AKA++ AG+ LP  GTVFLS +D  K  L  IA   +++GF + +TSGTA  L   
Sbjct: 956  GMAYAKAELGAGEALPTQGTVFLSTHDRDKQALVPIAARLIELGFDVTATSGTAQALANA 1015

Query: 1084 GIAVERVLKMHEGRPHAGDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITT 1143
            G+ V+ VLK+HEGRP+  D + + Q+Q+++ T  G      D   LRR  L Y VP +TT
Sbjct: 1016 GLKVQSVLKVHEGRPNIEDQIRSNQVQLVINTPIGRQAAH-DDKYLRRAALDYAVPTVTT 1074

Query: 1144 VSGALANAEAIRSLKSN-TVTMTALQD 1169
            ++GA A  EAI +L+    +++ ALQD
Sbjct: 1075 LAGARAAVEAISALQQQPRLSIHALQD 1101



 Score =  224 bits (572), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 132/405 (32%), Positives = 222/405 (54%), Gaps = 16/405 (3%)

Query: 85  KLGKRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPG 144
           ++ +R D RK++ILG GP  IGQ  EFDY    A  A +++G   +++NSNP T+ TD  
Sbjct: 568 EVSRRDDGRKMMILGGGPNRIGQGIEFDYCCCHASFAGQDQGITTVMVNSNPETVSTDYD 627

Query: 145 LADRTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVAL---AESGALEKYGVELI 201
            +D  Y  P+T E V  V+E E PD ++   GGQT L LA+ L    +S      G  + 
Sbjct: 628 TSDSLYFEPLTLEDVLNVIEAEVPDGVVVQFGGQTPLKLAIPLLRWLDSDEGRATGTSIW 687

Query: 202 GAKLDAIKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLG 261
           G   ++I +AEDR+ F+  ++ + ++ P +G+  + +E  ++A  +G +P+++RP++ LG
Sbjct: 688 GTSPESIDQAEDREQFEAILRNLNIRQPRNGLARSEEEARAVATRVG-YPVVVRPSYVLG 746

Query: 262 GTGGGIAYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIE 321
           G    + +++EE     +  +       VL+++ L    E +++ + D    V++   +E
Sbjct: 747 GRAMEVVFDEEELNRYMREAVQVEPDHPVLIDQYLENAVEVDVDALCDHTGAVIVGGLME 806

Query: 322 NVDPMGVHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVN-PVDGE 380
           +++P G+H+GDS    PA +L +     +RD+S ++ + + V  G  N+QFAV    DG 
Sbjct: 807 HIEPAGIHSGDSACCLPAVSLGEAALNTIRDWSRSLAQTLEVR-GLINLQFAVQRNTDGS 865

Query: 381 --VMVIEMNPRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSID 438
             V +IE NPR SR+    +KATG P+A++A +L  G +L  I      K P     SI 
Sbjct: 866 EVVYIIEANPRASRTVPFVAKATGQPLARLATRLMAGETLTDIGMTSEPKPPLQ---SIK 922

Query: 439 YVVTKIPRFAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKA 483
             V       F +FPG++ +L  +M+S GE M    +F  ++ KA
Sbjct: 923 EAV-----LPFRRFPGADTVLGPEMRSTGEVMGSADSFGMAYAKA 962


>gi|116070931|ref|ZP_01468200.1| Carbamoyl-phosphate synthase, large subunit, glutamine-dependent
            [Synechococcus sp. BL107]
 gi|116066336|gb|EAU72093.1| Carbamoyl-phosphate synthase, large subunit, glutamine-dependent
            [Synechococcus sp. BL107]
          Length = 1106

 Score = 1371 bits (3549), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 676/1108 (61%), Positives = 853/1108 (76%), Gaps = 35/1108 (3%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            +RTDLR+IL++G+GPIVIGQACEFDYSGTQACKAL+ EG+EV+L+NSNPA+IMTDPG+AD
Sbjct: 3    RRTDLRRILLVGSGPIVIGQACEFDYSGTQACKALRAEGFEVVLVNSNPASIMTDPGMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
            RTYI P+TPE+V +V+EKERPDALLPTMGGQTALNLAV LAE+G L+++GVELIGA L A
Sbjct: 63   RTYIEPLTPEVVAKVIEKERPDALLPTMGGQTALNLAVTLAENGTLDRFGVELIGADLQA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I+KAEDR LFKQAM+ IGV   PSGI +T +E  ++  EIG FP IIRPAFTLGG+GGGI
Sbjct: 123  IQKAEDRLLFKQAMERIGVSVCPSGIASTQEEAETVGAEIGSFPRIIRPAFTLGGSGGGI 182

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN EEF AICK+GL AS  SQ+L+E+SLLGWKE+ELEVMRDLADNVVI+CSIEN+DPMG
Sbjct: 183  AYNPEEFAAICKSGLEASPVSQILIEQSLLGWKEFELEVMRDLADNVVIVCSIENLDPMG 242

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTD+EYQRLRD SIAIIREIGV  GGSN+QFA+NP +G+V+VIEMN
Sbjct: 243  VHTGDSITVAPAQTLTDREYQRLRDQSIAIIREIGVATGGSNIQFAINPANGDVVVIEMN 302

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRF 447
            PRVSRSSALASKATGFPIAK+AA+L+VGY+LD+I NDIT +TPA FEP+IDYVVTKIPRF
Sbjct: 303  PRVSRSSALASKATGFPIAKIAARLAVGYTLDEILNDITGQTPACFEPTIDYVVTKIPRF 362

Query: 448  AFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDWE 507
            AFEKF GS  +LTT MKSVGEAMA+GR F+ESFQKA+RSLE GFSGWG  +  E +    
Sbjct: 363  AFEKFKGSPAVLTTSMKSVGEAMAIGRCFEESFQKAMRSLETGFSGWG-GDRDEPNLSDS 421

Query: 508  QLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLT-QSV 566
            ++   LR P+P+R+  +  AM  G    +IH +S ID WFL + + ++D E  L+  + +
Sbjct: 422  EIDRLLRTPSPERILTVRTAMVSGRSDADIHRISKIDPWFLAKLRRIVDAESRLMRGRQL 481

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
              +      E+K+ GFSD+QIA+ T + E  VR  R  L V   +K VDTCAAEF + TP
Sbjct: 482  DELGASTLLELKQLGFSDRQIAWCTGTNELSVRSHRHKLDVRAVFKTVDTCAAEFASTTP 541

Query: 627  YMYSSYDFECE-----------------SAPTQKKKVLILGGGPNRIGQGIEFDYCCCHT 669
            Y YS+Y+   +                 S  + ++K++ILGGGPNRIGQGIEFDYCCCH 
Sbjct: 542  YHYSTYERPLQKLQPDGTLITQPSATEVSRKSDQRKMMILGGGPNRIGQGIEFDYCCCHA 601

Query: 670  SFSLQSAGYETIMMNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQ 729
            SFS Q  G  T+M+NSNPETVSTDYDTSD LYFEPLT+EDVLNVI+ ERP G++VQFGGQ
Sbjct: 602  SFSAQEQGITTVMVNSNPETVSTDYDTSDSLYFEPLTLEDVLNVIEAERPNGVVVQFGGQ 661

Query: 730  TPLKLSLPIHQYLDEHRLPSASGDGLV---RIWGTSPDSIDAAEDRERFNAIIKELSIEQ 786
            TPLKL++P+ ++L+       S DG V    IWGTSP+SID AEDRE+F AI+++LSI Q
Sbjct: 662  TPLKLAIPLLRWLN-------SPDGQVTGTEIWGTSPESIDRAEDREQFEAILRDLSIRQ 714

Query: 787  PKGGIAKSEADALAIAKEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERP 846
            P+ G+A+SE +A AIA  +GYPVVVRPSYVLGGRAME+V+ ++ L  Y+  AV+V+P+ P
Sbjct: 715  PRNGLARSEEEARAIATVVGYPVVVRPSYVLGGRAMEVVFDEQELNRYMREAVQVEPDHP 774

Query: 847  VLIDKYLSDAIEIDVDALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDT 906
            VLID+YL +A+E+DVDAL+D  GNVVIGG+MEHIE AG+HSGDSAC +PT ++  S L T
Sbjct: 775  VLIDQYLENAVEVDVDALSDQDGNVVIGGLMEHIEPAGIHSGDSACCLPTVSLGESALHT 834

Query: 907  ISSWTIKLAKRLNVCGLMNCQYAITTSGD----VYLLEANPRASRTVPFVSKAIGHPLAK 962
            I  W+  LA  L V GL+N Q+A+    +    V+++EANPRASRTVPFV+KA G PLA+
Sbjct: 835  IREWSKALAISLKVKGLINLQFAVQRDSNGQEVVFIIEANPRASRTVPFVAKATGKPLAR 894

Query: 963  YAALVMSGKSLNDLGFTKEVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMS 1022
             A  +M+G+SL D+G T+E  P   ++KEAVLPF +F G D +LGPEMRSTGEVMG   S
Sbjct: 895  LATRLMAGESLADVGLTEEPQPPLQAIKEAVLPFRRFPGADTVLGPEMRSTGEVMGSATS 954

Query: 1023 FPIAFAKAQIAAGQKLPLSGTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLEL 1082
            F +A+AKA++ AG+ LP  GTVFLS +D  K  L  +A   +++GF++++T+GTAH LE 
Sbjct: 955  FGMAYAKAELGAGEALPTQGTVFLSTHDRDKSSLVPVAARLIELGFELMATAGTAHTLEQ 1014

Query: 1083 KGIAVERVLKMHEGRPHAGDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVIT 1142
              + V+ VLK+HEGRP+  D++ + Q+Q+++ T  G      D   LRR  L Y VP +T
Sbjct: 1015 ASLVVQTVLKVHEGRPNIEDLIRSKQVQLVINTPIGRQAAH-DDKYLRRAALDYAVPTVT 1073

Query: 1143 TVSGALANAEAIRSLKSN-TVTMTALQD 1169
            T++GA A  EAI +++S  T+++ ALQD
Sbjct: 1074 TLAGARAAVEAIAAMQSEPTLSIYALQD 1101



 Score =  227 bits (578), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 132/405 (32%), Positives = 227/405 (56%), Gaps = 16/405 (3%)

Query: 85  KLGKRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPG 144
           ++ +++D RK++ILG GP  IGQ  EFDY    A  + +E+G   +++NSNP T+ TD  
Sbjct: 568 EVSRKSDQRKMMILGGGPNRIGQGIEFDYCCCHASFSAQEQGITTVMVNSNPETVSTDYD 627

Query: 145 LADRTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAE---SGALEKYGVELI 201
            +D  Y  P+T E V  V+E ERP+ ++   GGQT L LA+ L     S   +  G E+ 
Sbjct: 628 TSDSLYFEPLTLEDVLNVIEAERPNGVVVQFGGQTPLKLAIPLLRWLNSPDGQVTGTEIW 687

Query: 202 GAKLDAIKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLG 261
           G   ++I +AEDR+ F+  ++ + ++ P +G+  + +E  +IA  +G +P+++RP++ LG
Sbjct: 688 GTSPESIDRAEDREQFEAILRDLSIRQPRNGLARSEEEARAIATVVG-YPVVVRPSYVLG 746

Query: 262 GTGGGIAYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIE 321
           G    + ++++E     +  +       VL+++ L    E +++ + D   NVVI   +E
Sbjct: 747 GRAMEVVFDEQELNRYMREAVQVEPDHPVLIDQYLENAVEVDVDALSDQDGNVVIGGLME 806

Query: 322 NVDPMGVHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVN-PVDGE 380
           +++P G+H+GDS    P  +L +     +R++S A+   + V+ G  N+QFAV    +G+
Sbjct: 807 HIEPAGIHSGDSACCLPTVSLGESALHTIREWSKALAISLKVK-GLINLQFAVQRDSNGQ 865

Query: 381 --VMVIEMNPRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSID 438
             V +IE NPR SR+    +KATG P+A++A +L  G SL  +   +T+      EP   
Sbjct: 866 EVVFIIEANPRASRTVPFVAKATGKPLARLATRLMAGESLADV--GLTE------EPQPP 917

Query: 439 YVVTKIPRFAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKA 483
               K     F +FPG++ +L  +M+S GE M    +F  ++ KA
Sbjct: 918 LQAIKEAVLPFRRFPGADTVLGPEMRSTGEVMGSATSFGMAYAKA 962


>gi|33865364|ref|NP_896923.1| carbamoyl phosphate synthase large subunit [Synechococcus sp. WH
            8102]
 gi|33632533|emb|CAE07345.1| carbamoyl phosphate synthetase, large subunit [Synechococcus sp. WH
            8102]
          Length = 1107

 Score = 1371 bits (3549), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 670/1105 (60%), Positives = 849/1105 (76%), Gaps = 29/1105 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            +RTDLR+IL+LG+GPIVIGQACEFDYSGTQACKAL+ EGYEVIL+NSNPA+IMTDP +AD
Sbjct: 3    RRTDLRRILLLGSGPIVIGQACEFDYSGTQACKALRSEGYEVILVNSNPASIMTDPEMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
            RTYI P+TP++V +V+E+ERPDALLPTMGGQTALNLAV LAE+G LE+YGVELIGA L A
Sbjct: 63   RTYIEPLTPDVVTRVIERERPDALLPTMGGQTALNLAVTLAENGTLERYGVELIGADLQA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I+KAEDR LFKQAM+ IGV+  PSGI +TL+E  ++   IG FP IIRPAFTLGG+GGGI
Sbjct: 123  IQKAEDRLLFKQAMERIGVQVCPSGIASTLEEAEAVGAAIGSFPRIIRPAFTLGGSGGGI 182

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN EE+ AICK+GL AS  SQ+L+E+SLLGWKE+ELEVMRD ADNVVI+CSIEN+DPMG
Sbjct: 183  AYNPEEYAAICKSGLEASPVSQILIEQSLLGWKEFELEVMRDQADNVVILCSIENLDPMG 242

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTD+EYQRLRD SIAIIREIGV  GGSN+QFA+NP +G+V+VIEMN
Sbjct: 243  VHTGDSITVAPAQTLTDREYQRLRDQSIAIIREIGVATGGSNIQFAINPDNGDVVVIEMN 302

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRF 447
            PRVSRSSALASKATGFPIAK+AA+L++G++LD+I NDIT KTPA FEP+IDYVVTKIPRF
Sbjct: 303  PRVSRSSALASKATGFPIAKIAARLAIGFTLDEILNDITGKTPACFEPTIDYVVTKIPRF 362

Query: 448  AFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDWE 507
            AFEKF GS  +LTT MKSVGEAMA+GR+F+ESFQKA+RSLE G+SGWG  +  E +    
Sbjct: 363  AFEKFRGSPAVLTTSMKSVGEAMAIGRSFEESFQKAMRSLETGYSGWG-GDRPEPELSEA 421

Query: 508  QLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLT-QSV 566
             +   LR P+P+R+  + +AM +G    EIH +S ID WFL + + ++D EQ LL  + +
Sbjct: 422  DIDRLLRTPSPERILCVRSAMLRGRSDAEIHRISSIDPWFLAKLRSIVDAEQQLLRGRQL 481

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
             +++     E+K+ GFSD+QIA+ T S E  VR  R   G+   +K VDTCAAEF + TP
Sbjct: 482  GDLSAPKLLELKQLGFSDRQIAWQTDSDELSVRRHRHDHGIRAVFKTVDTCAAEFASTTP 541

Query: 627  YMYSSYDFECE-----------------SAPTQKKKVLILGGGPNRIGQGIEFDYCCCHT 669
            Y YS+Y+   +                 S  +  +KV+ILGGGPNRIGQGIEFDYCCCH 
Sbjct: 542  YHYSTYERSIQQLNSDGSLTTLSPASEVSNSSSGRKVMILGGGPNRIGQGIEFDYCCCHA 601

Query: 670  SFSLQSAGYETIMMNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQ 729
            SF+ Q AG  ++M+NSNPETVSTDYDTSD LYFEPLT+EDVLNVI++E+P+G++VQFGGQ
Sbjct: 602  SFAAQDAGITSVMVNSNPETVSTDYDTSDSLYFEPLTLEDVLNVIEVEQPDGVVVQFGGQ 661

Query: 730  TPLKLSLPIHQYLDEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKG 789
            TPLKL++P+  +L+      A+G    +IWGTSP+SID AEDRE+F AI+ +L I QP+ 
Sbjct: 662  TPLKLAIPLLNWLNSEE-GRATG---TQIWGTSPESIDRAEDREQFEAILSQLEIRQPRH 717

Query: 790  GIAKSEADALAIAKEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLI 849
            G+A+SE +A  +A  +GYPVVVRPSYVLGGRAME+V+ ++ L  Y+  AV+V+P+ PVLI
Sbjct: 718  GLARSETEARDVATRVGYPVVVRPSYVLGGRAMEVVFDEQELNRYMLEAVQVEPDHPVLI 777

Query: 850  DKYLSDAIEIDVDALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISS 909
            D+YL +A+E+DVDAL D  GNVVIGG+MEHIE AG+HSGDSAC +P  ++    L TI  
Sbjct: 778  DQYLENAVEVDVDALCDHEGNVVIGGLMEHIEPAGIHSGDSACCLPAVSLGEGALGTIRE 837

Query: 910  WTIKLAKRLNVCGLMNCQYAITTSGD----VYLLEANPRASRTVPFVSKAIGHPLAKYAA 965
            W+  LA  L V GL+N Q+A+  + +    VY++EANPRASRTVPFV+KA G PLA+ A 
Sbjct: 838  WSRGLALALKVQGLINLQFAVQRNAEGEEVVYIIEANPRASRTVPFVAKATGQPLARIAT 897

Query: 966  LVMSGKSLNDLGFTKEVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPI 1025
             +M+G++L  +G T E  P   ++KEAVLPF +F G D +LGPEMRSTGEVMG   SF +
Sbjct: 898  RLMAGETLQQVGLTTEPQPPLQTIKEAVLPFRRFPGADTVLGPEMRSTGEVMGSADSFGM 957

Query: 1026 AFAKAQIAAGQKLPLSGTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGI 1085
            A+AKA++ AG+ LP +GTVFLS ++  KP L  +A+    +GF +++TSGTA  L   G+
Sbjct: 958  AYAKAELGAGEALPTTGTVFLSTHNRDKPALVPVAERLAKLGFDLIATSGTADVLTKAGL 1017

Query: 1086 AVERVLKMHEGRPHAGDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVS 1145
             V  VLK+HEGRP+  DM+ + Q+Q+++ T  G      D   LRR  L Y VP +TT++
Sbjct: 1018 TVNAVLKVHEGRPNIEDMIRSNQVQLVINTPIGRQAAH-DDKYLRRAALDYAVPTVTTLA 1076

Query: 1146 GALANAEAIRSLKSN-TVTMTALQD 1169
            GA A  EAI +L+S  T+++ ALQD
Sbjct: 1077 GARAAVEAIATLQSQPTLSINALQD 1101


>gi|124025600|ref|YP_001014716.1| carbamoyl phosphate synthase large subunit [Prochlorococcus marinus
            str. NATL1A]
 gi|123960668|gb|ABM75451.1| carbamoyl-phosphate synthase, large subunit [Prochlorococcus marinus
            str. NATL1A]
          Length = 1102

 Score = 1370 bits (3546), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 668/1104 (60%), Positives = 845/1104 (76%), Gaps = 27/1104 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            +R D+R+ILILG+GPIVIGQACEFDYSGTQACKAL+ EG+EVIL+NSNPA+IMTDP  A+
Sbjct: 3    RRKDIRRILILGSGPIVIGQACEFDYSGTQACKALRGEGFEVILVNSNPASIMTDPETAN 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
            RTY+ P+T  +VEQ+++ ERPDALLPTMGGQTALN++V LAESG LEKY +ELIGA L+A
Sbjct: 63   RTYVEPLTASVVEQIIKIERPDALLPTMGGQTALNISVELAESGILEKYNIELIGADLNA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            IKKAEDR+LFK AMK IGV   PSGI + L E + + NEI  FP IIRPAFTLGG+GGGI
Sbjct: 123  IKKAEDRNLFKIAMKNIGVDVCPSGIASNLQEAVIVGNEISSFPKIIRPAFTLGGSGGGI 182

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN++EF  +CK GL AS  SQ+L+EKSLLGWKE+ELEVMRDL+DNVVIICSIENVDPMG
Sbjct: 183  AYNQDEFLELCKTGLDASPVSQILIEKSLLGWKEFELEVMRDLSDNVVIICSIENVDPMG 242

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTD+EYQRLRDYSI+IIREIGV  GGSN+QFA+NP +GE++VIEMN
Sbjct: 243  VHTGDSITVAPAQTLTDREYQRLRDYSISIIREIGVATGGSNIQFAINPNNGEIIVIEMN 302

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRF 447
            PRVSRSSALASKATGFPIAK+AA L+VGY LD+I NDIT KTPA FEPSIDYVVTKIPRF
Sbjct: 303  PRVSRSSALASKATGFPIAKIAALLAVGYRLDEIINDITGKTPACFEPSIDYVVTKIPRF 362

Query: 448  AFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDWE 507
            AFEKF GS  +LTT MKSVGEAMA+GR F+ESFQKA+RSLE G SGWGC  V + +    
Sbjct: 363  AFEKFSGSSSILTTSMKSVGEAMAIGRCFEESFQKAIRSLETGLSGWGCDRVDQ-NVSSI 421

Query: 508  QLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVE-QFLLTQSV 566
            +L+  LR P+P+R+  +  AMK G   +EI   S ID WFL++ + +++ E Q L  +++
Sbjct: 422  ELERLLRTPSPERIMHVRLAMKNGRSDNEIFSFSKIDPWFLSKLRNIVEAEDQLLNYENI 481

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
            + +  +  +++K+ GFSD+QIAFA  + E  +R +R  L ++P YK VDTCA+EF +NTP
Sbjct: 482  TQLEPNFLFKLKQLGFSDRQIAFALNTDELTIRARRTHLKILPVYKTVDTCASEFSSNTP 541

Query: 627  YMYSSYDFEC----------------ESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTS 670
            Y YS+Y+                   E     K K+LILGGGPNRIGQGIEFDYCCCH S
Sbjct: 542  YHYSTYERPAYNIDNDGNIIKNINLNELKNDNKNKILILGGGPNRIGQGIEFDYCCCHAS 601

Query: 671  FSLQSAGYETIMMNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQT 730
            +  Q   Y TIM+NSNPETVSTDYDTSD LYFEPLT+EDVLNVI+ E P GI+VQFGGQT
Sbjct: 602  YQAQEEDYTTIMLNSNPETVSTDYDTSDILYFEPLTLEDVLNVIEFEEPYGIVVQFGGQT 661

Query: 731  PLKLSLPIHQYLDEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGG 790
            PLKLSLPI  +L++      +     ++ GTSP SID AEDRE+F+ +++ L I QPK G
Sbjct: 662  PLKLSLPIVNWLEKLE----NSKLRTKVLGTSPISIDLAEDREQFDKVLRRLDIRQPKNG 717

Query: 791  IAKSEADALAIAKEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLID 850
            +A++  ++L++A ++GYP+VVRPSYVLGGRAMEIVY  + L  Y++ AV V+P+ P+LID
Sbjct: 718  LARTFEESLSVANKVGYPLVVRPSYVLGGRAMEIVYEQDELERYIKEAVNVEPDHPILID 777

Query: 851  KYLSDAIEIDVDALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSW 910
            +YL +AIE+DVDAL D   NVVIGG+MEHIE AG+HSGDSAC +P+ T+S   + TI  W
Sbjct: 778  QYLENAIEVDVDALCDVSKNVVIGGLMEHIEPAGIHSGDSACCLPSITLSVESIKTIKHW 837

Query: 911  TIKLAKRLNVCGLMNCQYAITTSGD----VYLLEANPRASRTVPFVSKAIGHPLAKYAAL 966
            T  LA  L+V GL+N Q+A+    +    VY++EANPRASRTVPFVSKA G PLAK A  
Sbjct: 838  TKSLAIELDVVGLINLQFAVKRDDEGNEIVYIIEANPRASRTVPFVSKATGVPLAKIATQ 897

Query: 967  VMSGKSLNDLGFTKEVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIA 1026
            ++ GK+L D+G  +E IP   ++KEAV+PF++F G D LLGPEMRSTGEVMG   +F +A
Sbjct: 898  LLLGKTLKDIGLNQEPIPPLQTIKEAVMPFKRFPGSDSLLGPEMRSTGEVMGSAKTFGMA 957

Query: 1027 FAKAQIAAGQKLPLSGTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIA 1086
            +AK+++AAG+ LP SG VFLS +D  KP L  +AK  +++GF +++TSGT+ +LE   + 
Sbjct: 958  YAKSELAAGEGLPTSGFVFLSTHDRDKPALIPVAKKLIELGFSVLATSGTSKYLEKFDLN 1017

Query: 1087 VERVLKMHEGRPHAGDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSG 1146
            VERVLK+HEGRP+  DM+ +G++Q+++ T  G      D   LR+  L Y VP +TT+ G
Sbjct: 1018 VERVLKVHEGRPNIEDMIRSGKVQLVINTPIGRQA-IYDDKYLRKAALDYSVPTLTTLKG 1076

Query: 1147 ALANAEAIRSLKSNTVTMTALQDF 1170
            A A  + I +L++  ++++ALQD 
Sbjct: 1077 ASAAVKGIEALQNQILSVSALQDI 1100


>gi|78184411|ref|YP_376846.1| carbamoyl phosphate synthase large subunit [Synechococcus sp. CC9902]
 gi|78168705|gb|ABB25802.1| carbamoyl-phosphate synthase large subunit [Synechococcus sp. CC9902]
          Length = 1106

 Score = 1369 bits (3544), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 676/1108 (61%), Positives = 851/1108 (76%), Gaps = 35/1108 (3%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            +RTDLR+IL++G+GPIVIGQACEFDYSGTQACKAL+ EG+EV+L+NSNPA+IMTDPG+AD
Sbjct: 3    RRTDLRRILLVGSGPIVIGQACEFDYSGTQACKALRAEGFEVVLVNSNPASIMTDPGMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
            RTYI P+TPE+V QV+EKERPDALLPTMGGQTALNLAV LAE+G L+++GVELIGA L A
Sbjct: 63   RTYIEPLTPEVVTQVIEKERPDALLPTMGGQTALNLAVTLAENGTLDRFGVELIGADLQA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I+KAEDR LFKQAM+ IGV   PSGI +TL+E  ++  EI  FP IIRPAFTLGG+GGGI
Sbjct: 123  IQKAEDRLLFKQAMERIGVSVCPSGIASTLEEADAVGAEISSFPRIIRPAFTLGGSGGGI 182

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN EEF AICK+GL AS  SQ+L+E+SLLGWKE+ELEVMRDLADNVVI+CSIEN+DPMG
Sbjct: 183  AYNPEEFAAICKSGLEASPVSQILIEQSLLGWKEFELEVMRDLADNVVIVCSIENLDPMG 242

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTD+EYQRLRD SIAIIREIGV  GGSN+QFA+NP +G+V+VIEMN
Sbjct: 243  VHTGDSITVAPAQTLTDREYQRLRDQSIAIIREIGVATGGSNIQFAINPDNGDVVVIEMN 302

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRF 447
            PRVSRSSALASKATGFPIAK+AA+L+VGY+LD+I NDIT +TPA FEP+IDYVVTKIPRF
Sbjct: 303  PRVSRSSALASKATGFPIAKIAARLAVGYTLDEILNDITGQTPACFEPTIDYVVTKIPRF 362

Query: 448  AFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDWE 507
            AFEKF GS  +LTT MKSVGEAMA+GR F+ESFQKA+RSLE GFSGWG  +  E +    
Sbjct: 363  AFEKFKGSPAVLTTSMKSVGEAMAIGRCFEESFQKAMRSLETGFSGWG-GDRDEPNLSDS 421

Query: 508  QLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLT-QSV 566
            ++   LR P+P+R+  +  AM  G    +IH +S ID WFL + + ++D E  L+  + +
Sbjct: 422  EIDRLLRTPSPERILTVRTAMVNGRSDADIHRISNIDPWFLAKLRRIVDAESTLMRGRQL 481

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
              +      E+K+ GFSD+QIA+ T + E  VR  R  L V   +K VDTCAAEF + TP
Sbjct: 482  DELDASTLLEIKQLGFSDRQIAWCTGTDELSVRSHRHKLDVRAVFKTVDTCAAEFASTTP 541

Query: 627  YMYSSYDFECE-----------------SAPTQKKKVLILGGGPNRIGQGIEFDYCCCHT 669
            Y YS+Y+   +                 S  + ++K++ILGGGPNRIGQGIEFDYCCCH 
Sbjct: 542  YHYSTYERPLQKLQADGTLITLPSATEVSRNSDQRKMMILGGGPNRIGQGIEFDYCCCHA 601

Query: 670  SFSLQSAGYETIMMNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQ 729
            SFS Q  G  T+M+NSNPETVSTDYDTSD LYFEPLT+EDVLNVI+ ERP G++VQFGGQ
Sbjct: 602  SFSAQEQGITTVMVNSNPETVSTDYDTSDSLYFEPLTLEDVLNVIEAERPNGVVVQFGGQ 661

Query: 730  TPLKLSLPIHQYLDEHRLPSASGDGLV---RIWGTSPDSIDAAEDRERFNAIIKELSIEQ 786
            TPLKL++P+ ++L+       S DG V    IWGTSP+SID AEDRE+F AI++EL I Q
Sbjct: 662  TPLKLAIPLLRWLN-------SPDGQVTGTEIWGTSPESIDRAEDREQFEAILRELDIRQ 714

Query: 787  PKGGIAKSEADALAIAKEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERP 846
            P+ G+A+SE +A +IA  +GYPVVVRPSYVLGGRAME+V+ ++ L  Y+  AV+V+P+ P
Sbjct: 715  PRNGLARSEEEARSIATVVGYPVVVRPSYVLGGRAMEVVFDEQELNRYMREAVQVEPDHP 774

Query: 847  VLIDKYLSDAIEIDVDALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDT 906
            VLID+YL +A+E+DVDAL+D  GNVVIGG+MEHIE AG+HSGDSAC +PT ++  S L T
Sbjct: 775  VLIDQYLENAVEVDVDALSDQDGNVVIGGLMEHIEPAGIHSGDSACCLPTVSLGESALHT 834

Query: 907  ISSWTIKLAKRLNVCGLMNCQYAITTSGD----VYLLEANPRASRTVPFVSKAIGHPLAK 962
            I  W+  LA  L V GL+N Q+A+    D    V+++EANPRASRTVPFV+KA G PLA+
Sbjct: 835  IREWSKALAISLKVKGLINLQFAVQRDSDGEEVVFIIEANPRASRTVPFVAKATGKPLAR 894

Query: 963  YAALVMSGKSLNDLGFTKEVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMS 1022
             A  +M+G+SL D+G T+E  P   ++KEAVLPF +F G D +LGPEMRSTGEVMG   S
Sbjct: 895  LATRLMAGESLVDVGLTEEPQPPLQAIKEAVLPFRRFPGADTVLGPEMRSTGEVMGSATS 954

Query: 1023 FPIAFAKAQIAAGQKLPLSGTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLEL 1082
            F +A+AKA++ AG+ LP  GTVFLS +D  K  L  +A   +++GF++++T+GTAH L  
Sbjct: 955  FGMAYAKAELGAGEALPTQGTVFLSTHDRDKSSLVPVAARLIELGFELMATAGTAHTLGQ 1014

Query: 1083 KGIAVERVLKMHEGRPHAGDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVIT 1142
              + V+ VLK+HEGRP+  D++ + Q+Q+++ T  G      D   LRR  L Y VP +T
Sbjct: 1015 ASLRVQTVLKVHEGRPNIEDLIRSNQVQLVINTPIGRQAAH-DDKYLRRAALDYAVPTVT 1073

Query: 1143 TVSGALANAEAIRSLKSN-TVTMTALQD 1169
            T++GA A  EAI +++S  T+++ ALQD
Sbjct: 1074 TLAGARAAVEAIAAMQSEPTLSIYALQD 1101



 Score =  229 bits (585), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 135/405 (33%), Positives = 226/405 (55%), Gaps = 16/405 (3%)

Query: 85  KLGKRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPG 144
           ++ + +D RK++ILG GP  IGQ  EFDY    A  + +E+G   +++NSNP T+ TD  
Sbjct: 568 EVSRNSDQRKMMILGGGPNRIGQGIEFDYCCCHASFSAQEQGITTVMVNSNPETVSTDYD 627

Query: 145 LADRTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAE---SGALEKYGVELI 201
            +D  Y  P+T E V  V+E ERP+ ++   GGQT L LA+ L     S   +  G E+ 
Sbjct: 628 TSDSLYFEPLTLEDVLNVIEAERPNGVVVQFGGQTPLKLAIPLLRWLNSPDGQVTGTEIW 687

Query: 202 GAKLDAIKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLG 261
           G   ++I +AEDR+ F+  ++ + ++ P +G+  + +E  SIA  +G +P+++RP++ LG
Sbjct: 688 GTSPESIDRAEDREQFEAILRELDIRQPRNGLARSEEEARSIATVVG-YPVVVRPSYVLG 746

Query: 262 GTGGGIAYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIE 321
           G    + ++++E     +  +       VL+++ L    E +++ + D   NVVI   +E
Sbjct: 747 GRAMEVVFDEQELNRYMREAVQVEPDHPVLIDQYLENAVEVDVDALSDQDGNVVIGGLME 806

Query: 322 NVDPMGVHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVN-PVDGE 380
           +++P G+H+GDS    P  +L +     +R++S A+   + V+ G  N+QFAV    DGE
Sbjct: 807 HIEPAGIHSGDSACCLPTVSLGESALHTIREWSKALAISLKVK-GLINLQFAVQRDSDGE 865

Query: 381 --VMVIEMNPRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSID 438
             V +IE NPR SR+    +KATG P+A++A +L  G SL  +   +T+      EP   
Sbjct: 866 EVVFIIEANPRASRTVPFVAKATGKPLARLATRLMAGESLVDV--GLTE------EPQPP 917

Query: 439 YVVTKIPRFAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKA 483
               K     F +FPG++ +L  +M+S GE M    +F  ++ KA
Sbjct: 918 LQAIKEAVLPFRRFPGADTVLGPEMRSTGEVMGSATSFGMAYAKA 962


>gi|33240347|ref|NP_875289.1| carbamoyl phosphate synthase large subunit [Prochlorococcus marinus
            subsp. marinus str. CCMP1375]
 gi|33237874|gb|AAP99941.1| Carbamoylphosphate synthase large subunit [Prochlorococcus marinus
            subsp. marinus str. CCMP1375]
          Length = 1108

 Score = 1368 bits (3541), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 679/1114 (60%), Positives = 845/1114 (75%), Gaps = 31/1114 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            +R D+R+ILILG+GPIVIGQACEFDYSGTQACKALK+EG+EV+LINSNPA+IMTDP +AD
Sbjct: 3    RRNDIRRILILGSGPIVIGQACEFDYSGTQACKALKKEGFEVVLINSNPASIMTDPEMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
            RTYI P+T E++ +++E E+PDALLPTMGGQTALN AV LAE G L K+ +ELIGA L++
Sbjct: 63   RTYIEPLTTEVITKIIELEKPDALLPTMGGQTALNAAVDLAEKGILRKFKIELIGADLES 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR LFK +M+ IGV   PSGI   ++E I++ + I  FP IIRPAFTLGG+GGGI
Sbjct: 123  INKAEDRQLFKNSMEKIGVNVCPSGIACNIEEAINVGSNIESFPRIIRPAFTLGGSGGGI 182

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEF +ICK+GL AS  SQ+L+EKSLLGWKE+ELEVMRD  DNVVIICSIEN+DPMG
Sbjct: 183  AYNQEEFISICKSGLEASPASQILIEKSLLGWKEFELEVMRDNVDNVVIICSIENIDPMG 242

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            +HTGDSIT+APAQTLTD+EYQRLRD SI IIREIGVE GGSNVQFAVNPVDGEV+VIEMN
Sbjct: 243  IHTGDSITIAPAQTLTDREYQRLRDQSIKIIREIGVETGGSNVQFAVNPVDGEVVVIEMN 302

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRF 447
            PRVSRSSALASKATGFPIAK+AA L++GY LD+I NDIT KTP  FEP+IDY+VTKIPRF
Sbjct: 303  PRVSRSSALASKATGFPIAKIAALLAIGYRLDEILNDITGKTPCCFEPTIDYIVTKIPRF 362

Query: 448  AFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWG--CSNVKELDWD 505
            AFEKF GS P+LTT MKSVGE MA+GR+F+ESFQKALRSLE G SGW   C N+     D
Sbjct: 363  AFEKFSGSPPILTTSMKSVGEVMAIGRSFEESFQKALRSLEIGLSGWSYDCENINISLKD 422

Query: 506  WEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQF-LLTQ 564
             ++L   LRVP+PDR+ AI  AM  G     I+ LS ID WFL++ + +++ E   LL +
Sbjct: 423  IDRL---LRVPSPDRLMAIKMAMYHGKSDQYINSLSNIDIWFLSKLRNIMEAENNKLLGK 479

Query: 565  SVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEAN 624
            ++ ++  D  +E+K+ GFSD QI F     E  VR  R  L + P YK VDTC++EFE+N
Sbjct: 480  TILDLDYDSMFELKKLGFSDSQIGFLVGEDELRVRSFRKDLNIKPVYKTVDTCSSEFESN 539

Query: 625  TPYMYSSYD--FE--------------CESAPTQKKKVLILGGGPNRIGQGIEFDYCCCH 668
            TPY YS+Y+  F+               E    Q +K+LILGGGPNRIGQGIEFDYCCCH
Sbjct: 540  TPYHYSTYERTFKEIIKDGSLINKSSANEVIQNQYRKILILGGGPNRIGQGIEFDYCCCH 599

Query: 669  TSFSLQSAGYETIMMNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGG 728
            +SF LQ  G++TIM+NSNPETVSTDYDTSD LYFEPLT EDVLNVI+LE PEGIIVQFGG
Sbjct: 600  SSFQLQKEGFQTIMLNSNPETVSTDYDTSDSLYFEPLTFEDVLNVIELENPEGIIVQFGG 659

Query: 729  QTPLKLSLPIHQYLDEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPK 788
            QTPLKL++PI  +LD       SG    +I+GTSP SID AEDRE+F  I++EL + QP 
Sbjct: 660  QTPLKLAMPILNWLDTKE-GKMSGS---KIFGTSPKSIDQAEDREQFEHILRELRVRQPS 715

Query: 789  GGIAKSEADALAIAKEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVL 848
             GIA+S ++A  IA  I YP+VVRPSYVLGGRAMEIVY  + L TY+  AV+V+P+ PVL
Sbjct: 716  NGIARSISEAEKIANRISYPLVVRPSYVLGGRAMEIVYDSQELKTYMNKAVKVEPDHPVL 775

Query: 849  IDKYLSDAIEIDVDALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTIS 908
            ID+YL +AIE+DVDAL+DS GNVVI G+MEHIE AG+HSGDSAC +P+ ++S S + TI 
Sbjct: 776  IDEYLENAIEVDVDALSDSFGNVVIAGLMEHIEPAGIHSGDSACCLPSISLSDSSIKTIK 835

Query: 909  SWTIKLAKRLNVCGLMNCQYAITTSGD----VYLLEANPRASRTVPFVSKAIGHPLAKYA 964
             WT  LAK LNV GL+N Q+A+    +    V+++EANPRASRT+PFVSKAIG PLA+ A
Sbjct: 836  EWTNSLAKSLNVIGLINLQFAVQRDDNGEEKVFIIEANPRASRTIPFVSKAIGWPLARLA 895

Query: 965  ALVMSGKSLNDLGFTKEVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFP 1024
              ++ GK+L+ +G   E +P   ++KEAV+PF +F G D +LGPEMRSTGEVM    +F 
Sbjct: 896  TSLLIGKTLHQIGILNEPVPPLQTIKEAVMPFRRFPGSDSVLGPEMRSTGEVMSSAKNFG 955

Query: 1025 IAFAKAQIAAGQKLPLSGTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKG 1084
            +A+AK+++AAG+ LP  G VFLS ++  KP L  IA+  +D+GF +++TSGTA  +   G
Sbjct: 956  MAYAKSELAAGEALPTKGIVFLSTHNRDKPALIPIARRLVDLGFGLIATSGTAEVISNAG 1015

Query: 1085 IAVERVLKMHEGRPHAGDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTV 1144
            I V  VLK+HEGRP+  D++ +GQIQ+++ T  G      D   LRR  L Y VP +TT+
Sbjct: 1016 IDVSSVLKVHEGRPNIEDVIRSGQIQLIINTPIGRQA-IYDDKYLRRAALDYSVPTLTTL 1074

Query: 1145 SGALANAEAIRSLKSNTVTMTALQDFFDVETASG 1178
            +GA A  E I +L++  +++TALQD   + T  G
Sbjct: 1075 AGARAAVEGICALQNEPISVTALQDIHSLVTFHG 1108


>gi|72382066|ref|YP_291421.1| carbamoyl phosphate synthase large subunit [Prochlorococcus marinus
            str. NATL2A]
 gi|72001916|gb|AAZ57718.1| carbamoyl-phosphate synthase large subunit [Prochlorococcus marinus
            str. NATL2A]
          Length = 1102

 Score = 1352 bits (3500), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 665/1104 (60%), Positives = 842/1104 (76%), Gaps = 27/1104 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            +R D+R+ILILG+GPIVIGQACEFDYSGTQACKAL+ EG+EVIL+NSNPA+IMTDP  A+
Sbjct: 3    RRKDIRRILILGSGPIVIGQACEFDYSGTQACKALRSEGFEVILVNSNPASIMTDPETAN 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
            RTY+ P+T  +VEQ+++ ERPDALLPTMGGQTALN++V LAESG LEKY +ELIGA L+A
Sbjct: 63   RTYVEPLTASVVEQIIKIERPDALLPTMGGQTALNISVELAESGTLEKYNIELIGADLNA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            IKKAEDR+LFK AMK IGV   PSGI + L E   + NEI  FP IIRPAFTLGG+GGGI
Sbjct: 123  IKKAEDRNLFKIAMKNIGVDVCPSGIASNLQEAEIVGNEISSFPKIIRPAFTLGGSGGGI 182

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN++EF  +CK GL AS  SQ+L+EKSLLGWKE+ELEVMRDL+DNVVIICSIENVDPMG
Sbjct: 183  AYNQDEFLELCKTGLDASPVSQILIEKSLLGWKEFELEVMRDLSDNVVIICSIENVDPMG 242

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTD+EYQRLRDYSI+IIREIGV  GGSN+QFA+NP +GE++VIEMN
Sbjct: 243  VHTGDSITVAPAQTLTDREYQRLRDYSISIIREIGVATGGSNIQFAINPNNGEIIVIEMN 302

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRF 447
            PRVSRSSALASKATGFPIAK+AA L+VGY LD+I NDIT KTPA FEPSIDYVVTKIPRF
Sbjct: 303  PRVSRSSALASKATGFPIAKIAALLAVGYRLDEIINDITGKTPACFEPSIDYVVTKIPRF 362

Query: 448  AFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDWE 507
            AFEKF GS  +LTT MKSVGEAMA+GR F+ESFQKA+RSLE G SGWGC  V + +    
Sbjct: 363  AFEKFSGSSSILTTSMKSVGEAMAIGRCFEESFQKAIRSLETGLSGWGCDRVDQ-NVSSI 421

Query: 508  QLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVE-QFLLTQSV 566
            +L+  LR P+P+R+  +  AMK G   +EI   S ID WFL++ + +++ E Q L  +++
Sbjct: 422  ELERLLRTPSPERIMHVRLAMKNGRSDNEIFSFSKIDPWFLSKLRNIVEAEDQLLNYENI 481

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
            + +  +  +++K+ GFSD+QIAFA  + E  +R +R  L ++P YK VDTCA+EF +NTP
Sbjct: 482  TQLEPNFLFKLKQLGFSDRQIAFALNTDELIIRARRTHLKILPVYKTVDTCASEFSSNTP 541

Query: 627  YMYSSYDFECESAPTQKKKV----------------LILGGGPNRIGQGIEFDYCCCHTS 670
            Y YS+Y+    +       +                LILGGGPNRIGQGIEFDYCCCH S
Sbjct: 542  YHYSTYERPAYNIDNDGNIIKNINLNELKNNNKNKILILGGGPNRIGQGIEFDYCCCHAS 601

Query: 671  FSLQSAGYETIMMNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQT 730
            +  Q   Y TIM+NSNPETVSTDYDTSD LYFEPLT+EDVLNVI+ E P GI+VQFGGQT
Sbjct: 602  YQAQEDDYTTIMINSNPETVSTDYDTSDILYFEPLTLEDVLNVIEFEEPHGIVVQFGGQT 661

Query: 731  PLKLSLPIHQYLDEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGG 790
            PLKLSLPI  +L++      +     ++ GTSP SID AEDRE+F+ +++ L I QPK G
Sbjct: 662  PLKLSLPIVNWLEKLE----NSKLRTKVLGTSPISIDLAEDREQFDKVLRRLDIRQPKNG 717

Query: 791  IAKSEADALAIAKEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLID 850
            +A++  ++L++A +IGYP+VVRPSYVLGGRAMEIVY  + L  Y++ AV V+ + P+LID
Sbjct: 718  LARTFEESLSVANKIGYPLVVRPSYVLGGRAMEIVYEQDELERYIKEAVNVELDHPILID 777

Query: 851  KYLSDAIEIDVDALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSW 910
            +YL +AIE+DVDAL D   NVVIGG+MEHIE AG+HSGDSAC +P+ T+S   + TI  W
Sbjct: 778  QYLENAIEVDVDALCDVSKNVVIGGLMEHIEPAGIHSGDSACCLPSITLSVESIKTIKHW 837

Query: 911  TIKLAKRLNVCGLMNCQYAITTSGD----VYLLEANPRASRTVPFVSKAIGHPLAKYAAL 966
            T  LA  L+V GL+N Q+A+    +    VY++EANPRASRTVPFVSKA G PLAK A  
Sbjct: 838  TKSLAIELDVVGLINLQFAVKRDQEGNEIVYIIEANPRASRTVPFVSKATGVPLAKIATQ 897

Query: 967  VMSGKSLNDLGFTKEVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIA 1026
            ++ GK+L D+G  +E IP   ++KEAV+PF++F G D LLGPEMRSTGEVMG   +F +A
Sbjct: 898  LLLGKTLKDIGLNQEPIPPLQTIKEAVMPFKRFPGSDSLLGPEMRSTGEVMGSAKTFGMA 957

Query: 1027 FAKAQIAAGQKLPLSGTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIA 1086
            +AK+++AAG+ LP SG VFLS +D  KP L  +AK  +++GF +++TSGT+++LE   + 
Sbjct: 958  YAKSELAAGEGLPTSGFVFLSTHDRDKPALIPVAKKLIELGFSVLATSGTSNYLEKFDLN 1017

Query: 1087 VERVLKMHEGRPHAGDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSG 1146
            VERVLK+HEGRP+  DM+ +G++Q+++ T  G      D   LR+  L Y VP +TT+ G
Sbjct: 1018 VERVLKVHEGRPNIEDMIRSGKVQLVINTPIGRQA-IYDDKYLRKAALDYSVPTLTTLKG 1076

Query: 1147 ALANAEAIRSLKSNTVTMTALQDF 1170
            A A  + I +L++  ++++ALQD 
Sbjct: 1077 ASAAVKGIEALQNQILSVSALQDI 1100


>gi|95929151|ref|ZP_01311895.1| carbamoyl-phosphate synthase, large subunit [Desulfuromonas
            acetoxidans DSM 684]
 gi|95134649|gb|EAT16304.1| carbamoyl-phosphate synthase, large subunit [Desulfuromonas
            acetoxidans DSM 684]
          Length = 1085

 Score = 1343 bits (3477), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 668/1099 (60%), Positives = 830/1099 (75%), Gaps = 36/1099 (3%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++KILI+GAGPIVIGQACEFDYSGTQACKALK+EGYEV+L+NSNPATIMTDP  AD
Sbjct: 3    KRTDIKKILIIGAGPIVIGQACEFDYSGTQACKALKDEGYEVVLLNSNPATIMTDPDFAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
            RTY+ P+TP ++ +++EKERPDALLPT+GGQTALN AVA+A+ G L+K+GVELIGAKL A
Sbjct: 63   RTYVEPVTPAVLAKIIEKERPDALLPTLGGQTALNTAVAVAKDGTLDKFGVELIGAKLPA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I+KAEDR LFKQAM +IGV  P SG+ +  DE + +  E+G FP IIRP+FTLGGTGGGI
Sbjct: 123  IEKAEDRTLFKQAMDSIGVAVPRSGLAHNYDEAMVVIEEVG-FPAIIRPSFTLGGTGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EE+EA+  AG+ AS T ++LVE+S++GWKEYELEVMRDLADNVVIICSIEN D MG
Sbjct: 182  AYNREEYEAMAVAGIDASPTDEILVEESVIGWKEYELEVMRDLADNVVIICSIENFDAMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ LRD S+ IIREIGVE GGSN+QF +NP DG ++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQILRDASLKIIREIGVETGGSNIQFGINPKDGRLVVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRF 447
            PRVSRSSALASKATGFPIAK+AAKLSVGY+LD+IPNDIT++T ASFEP+IDYVVTK+PRF
Sbjct: 302  PRVSRSSALASKATGFPIAKIAAKLSVGYTLDEIPNDITRETFASFEPTIDYVVTKVPRF 361

Query: 448  AFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCS--------NV 499
             FEKFP ++P LTTQMKSVGEAMA+GRTF+ESFQKALRS+E G  G+             
Sbjct: 362  TFEKFPSTDPTLTTQMKSVGEAMAIGRTFKESFQKALRSMEIGSDGFESRLFASPADVTT 421

Query: 500  KELDWDWEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQF-------K 552
                 D EQL+  LRVPN DR   +  A++ G+ VDEI+++S ID WF+          K
Sbjct: 422  PLSAGDLEQLRDKLRVPNVDRTWYLGDALRAGLSVDEIYQISGIDPWFVNNIGQIIAKEK 481

Query: 553  ELIDVEQFLLTQSVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYK 612
            +L D  + +LT +   +  D   E K+ GFSD+++A+   + E  +R+ R    + P YK
Sbjct: 482  QLYDCRETILTATEQGL--DLLREAKQYGFSDRRLAYLLGTDEGVIRQLRYDHAIRPVYK 539

Query: 613  RVDTCAAEFEANTPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFS 672
            RVDTCAAEFEA TPYMYS+Y+ ECE+ P+ +KK++ILGGGPNRIGQGIEFDYCC H  F+
Sbjct: 540  RVDTCAAEFEAFTPYMYSTYEEECEANPSDRKKIMILGGGPNRIGQGIEFDYCCVHGVFA 599

Query: 673  LQSAGYETIMMNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPL 732
            L   G+ETIM+N NPETVSTDYDTSDRLYFEPLT+EDVL ++ +E P+G+IVQFGGQTPL
Sbjct: 600  LHDDGFETIMVNCNPETVSTDYDTSDRLYFEPLTLEDVLEIVAVENPDGVIVQFGGQTPL 659

Query: 733  KLSLPIHQYLDEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIA 792
            KL++ + +               V I GTSPD+ID AEDRERF A++ +L ++QP  G+A
Sbjct: 660  KLAVALEK-------------AGVPIIGTSPDAIDRAEDRERFQALLHKLDLKQPANGLA 706

Query: 793  KSEADALAIAKEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKY 852
            +S  +A  IA++IGYPVVVRPSYVLGGRAMEIVY  E L  Y++ AV+  PE P+LIDK+
Sbjct: 707  RSFEEAETIAEQIGYPVVVRPSYVLGGRAMEIVYGIEQLRNYMKFAVQASPEHPILIDKF 766

Query: 853  LSDAIEIDVDALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTI 912
            L  AIEIDVDALAD   +VVIGGIM+HIE+AG+HSGDSAC +P  +++   ++ +   T 
Sbjct: 767  LDHAIEIDVDALADGT-DVVIGGIMQHIEEAGIHSGDSACSLPPYSLAEELVEEVRRQTR 825

Query: 913  KLAKRLNVCGLMNCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKS 972
             LA  L V GLMN Q+A+  +  VYL+E NPRASRT PFVSKA G PLAK AA +M+GK+
Sbjct: 826  ALALELGVIGLMNIQFAVKDNV-VYLIEVNPRASRTSPFVSKATGRPLAKIAARLMAGKT 884

Query: 973  LNDLGFTKEVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQI 1032
            L +L    +++P HV+VKE+V PF KF G D LLGPEM+STGEVMG+D  F  AFAKAQ+
Sbjct: 885  LKELNILDDIVPDHVAVKESVFPFAKFPGVDTLLGPEMKSTGEVMGLDKDFGKAFAKAQM 944

Query: 1033 AAGQKLPLSGTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLK 1092
             AG  LPLSG VF+S+ D  KP    IAK  +D GF +++T GTA  L+  G+ VERV K
Sbjct: 945  GAGVNLPLSGKVFISVKDSDKPETIAIAKKLVDAGFSLIATGGTAATLQENGLPVERVNK 1004

Query: 1093 MHEGRPHAGDMVANGQIQMMVITSSGDSLDQI-DGLKLRRRGLAYKVPVITTVSGALANA 1151
            + EGRPH  D + NG I M+  T+ G  +  I D   +RR  L Y V   TTV+G  A  
Sbjct: 1005 VKEGRPHCVDAIKNGDIAMVFNTTFG--IQSIADSYSIRRSALMYSVAYFTTVTGMDAAV 1062

Query: 1152 EAIRSLKSNTVTMTALQDF 1170
            + I +++  T+ + ALQ++
Sbjct: 1063 DGILAMQRETLDVVALQEY 1081


>gi|126696383|ref|YP_001091269.1| carbamoyl-phosphate synthase, large subunit [Prochlorococcus marinus
            str. MIT 9301]
 gi|126543426|gb|ABO17668.1| carbamoyl-phosphate synthase, large subunit [Prochlorococcus marinus
            str. MIT 9301]
          Length = 1098

 Score = 1343 bits (3475), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 662/1104 (59%), Positives = 842/1104 (76%), Gaps = 28/1104 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            +R DL+KILILG+GPIVIGQACEFDYSGTQACKAL+  GYE++LINSNPA+IMTDP +A 
Sbjct: 3    QRGDLKKILILGSGPIVIGQACEFDYSGTQACKALRNAGYEIVLINSNPASIMTDPEVAS 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
            +TYI P+TPE+V Q++ +E+PDA+LPTMGGQTALNLAV L+ES  L++  +ELIGA L A
Sbjct: 63   KTYIEPLTPEIVSQIILREKPDAILPTMGGQTALNLAVKLSESNFLKQNNIELIGADLRA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR LFK++M+ I V   PSGI + LDE I ++ +I  +PLIIRPAFTLGG GGGI
Sbjct: 123  INKAEDRQLFKESMEKINVNVCPSGIASNLDEAIEVSRKICSYPLIIRPAFTLGGVGGGI 182

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            A+N EEF  +CK+GL  S ++Q+L+EKSL+GWKE+ELEVMRD ADNVVI+CSIEN+DPMG
Sbjct: 183  AFNLEEFVELCKSGLEESPSNQILIEKSLIGWKEFELEVMRDTADNVVIVCSIENLDPMG 242

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQRLRD S+ IIRE+GVE GGSN+QFA+NP +GEV+VIEMN
Sbjct: 243  VHTGDSITVAPAQTLTDKEYQRLRDLSLKIIREVGVETGGSNIQFAINPSNGEVIVIEMN 302

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRF 447
            PRVSRSSALASKATGFPIAK+AA LSVGY+LD+I NDITKKTPA FEPSIDYVVTKIPRF
Sbjct: 303  PRVSRSSALASKATGFPIAKIAALLSVGYTLDEIINDITKKTPACFEPSIDYVVTKIPRF 362

Query: 448  AFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDWE 507
            AFEKF GS   L+T MKSVGE+MA+GR+F+ESFQKALRSLE G  GW C +  E   +  
Sbjct: 363  AFEKFKGSSNTLSTSMKSVGESMAIGRSFEESFQKALRSLEVGVFGWECDSKDEF-INES 421

Query: 508  QLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQ-FLLTQSV 566
            Q+K SLR P  +R+  I  AM+ G   + I E++ ID WF+ + + + + E  FL  + +
Sbjct: 422  QIKNSLRNPTSERILLIKKAMQLGKNNNYIKEVTNIDLWFIEKLRNIFNFENDFLKDKEL 481

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
              + +D     K+ GFSD+QIA  T S   EVR  R  L VIP YK VDTC+AEF ++TP
Sbjct: 482  YTLDRDLMLHAKQLGFSDQQIAKLTNSEFFEVRTYRKKLNVIPIYKTVDTCSAEFSSSTP 541

Query: 627  YMYSSYD----------FECE-SAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQS 675
            Y YS+Y+          F+ E S  ++ KK++ILGGGPNRIGQGIEFDYCCCH S+   +
Sbjct: 542  YHYSTYEESFININSQIFDSEISEKSKSKKIMILGGGPNRIGQGIEFDYCCCHASYQAST 601

Query: 676  AGYETIMMNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLS 735
             GY+TIM+NSNPETVSTDYDTSD LYFEP+T+EDVLN+I+ E P G+IVQFGGQTPLKLS
Sbjct: 602  NGYKTIMVNSNPETVSTDYDTSDILYFEPVTLEDVLNIIEAENPYGLIVQFGGQTPLKLS 661

Query: 736  LPIHQYLDEHRLPSASGDGL---VRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIA 792
            LP+ ++L        S DG+    +I GTSP SID AEDRE F  I++ELSI QP  GIA
Sbjct: 662  LPLFEWL-------KSNDGIRTGSKILGTSPISIDLAEDREEFTKILEELSIRQPLNGIA 714

Query: 793  KSEADALAIAKEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKY 852
            +++ +A  +AK IG+P+VVRPSYVLGGRAMEIV  +  L  Y+  AV+V P+ P+L+D+Y
Sbjct: 715  RNQDEAEIVAKNIGFPLVVRPSYVLGGRAMEIVKDENELSRYISEAVKVSPDHPILLDQY 774

Query: 853  LSDAIEIDVDALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTI 912
            L++AIEIDVDAL DS G+VVI G+MEH+E AG+HSGDSAC +P+ ++S+S ++ + +WT 
Sbjct: 775  LNNAIEIDVDALCDSEGSVVIAGLMEHVEPAGIHSGDSACCLPSISLSTSTIENVRNWTK 834

Query: 913  KLAKRLNVCGLMNCQYAITTSGD----VYLLEANPRASRTVPFVSKAIGHPLAKYAALVM 968
             +A+RLNV GL+N Q+A+  + +    +++LEANPRASRTVPFVSKAIG P+AK A  +M
Sbjct: 835  LIAQRLNVVGLINLQFAVINTNNKEKKLFILEANPRASRTVPFVSKAIGKPVAKLATQLM 894

Query: 969  SGKSLNDLGFTKEVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFA 1028
             G +L DL FT+E  PK+ +VKEAVLPF++F G D LLGPEMRSTGEVMG+   F IA+A
Sbjct: 895  QGFTLEDLNFTEEFSPKYQAVKEAVLPFKRFPGSDTLLGPEMRSTGEVMGLAKDFGIAYA 954

Query: 1029 KAQIAAGQKLPLSGTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVE 1088
            K+++AAG  +P  G  FLS NDL K +LE +A+  L++GFK+++T GTA +L   GI VE
Sbjct: 955  KSELAAGNGVPSDGVAFLSTNDLDKKNLEEVARELLNLGFKLIATKGTASYLVNLGIQVE 1014

Query: 1089 RVLKMHEGRPHAGDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGAL 1148
             VLK+HEGRP+  D++ +G +Q+++ T  G      D   LRR  L Y +P  TT+ GA 
Sbjct: 1015 EVLKVHEGRPNIEDLIRSGLVQLIINTPIGSQALHDDAY-LRRAALEYNIPTFTTIPGAK 1073

Query: 1149 ANAEAIRSLKSNTVTMTALQDFFD 1172
            A  +AI++L+ N +   +LQ+  +
Sbjct: 1074 AAIKAIKALQCNKINTYSLQEIHN 1097



 Score =  228 bits (581), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 142/438 (32%), Positives = 236/438 (53%), Gaps = 16/438 (3%)

Query: 83  DQKLGKRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTD 142
           D ++ +++  +KI+ILG GP  IGQ  EFDY    A       GY+ I++NSNP T+ TD
Sbjct: 560 DSEISEKSKSKKIMILGGGPNRIGQGIEFDYCCCHASYQASTNGYKTIMVNSNPETVSTD 619

Query: 143 PGLADRTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAE---SGALEKYGVE 199
              +D  Y  P+T E V  ++E E P  L+   GGQT L L++ L E   S    + G +
Sbjct: 620 YDTSDILYFEPVTLEDVLNIIEAENPYGLIVQFGGQTPLKLSLPLFEWLKSNDGIRTGSK 679

Query: 200 LIGAKLDAIKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFT 259
           ++G    +I  AEDR+ F + ++ + ++ P +GI    DE   +A  IG FPL++RP++ 
Sbjct: 680 ILGTSPISIDLAEDREEFTKILEELSIRQPLNGIARNQDEAEIVAKNIG-FPLVVRPSYV 738

Query: 260 LGGTGGGIAYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICS 319
           LGG    I  ++ E        +  S    +L+++ L    E +++ + D   +VVI   
Sbjct: 739 LGGRAMEIVKDENELSRYISEAVKVSPDHPILLDQYLNNAIEIDVDALCDSEGSVVIAGL 798

Query: 320 IENVDPMGVHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAV---NP 376
           +E+V+P G+H+GDS    P+ +L+    + +R+++  I + + V  G  N+QFAV   N 
Sbjct: 799 MEHVEPAGIHSGDSACCLPSISLSTSTIENVRNWTKLIAQRLNV-VGLINLQFAVINTNN 857

Query: 377 VDGEVMVIEMNPRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPS 436
            + ++ ++E NPR SR+    SKA G P+AK+A +L  G++L+ +  + T++    F P 
Sbjct: 858 KEKKLFILEANPRASRTVPFVSKAIGKPVAKLATQLMQGFTLEDL--NFTEE----FSPK 911

Query: 437 IDYVVTKIPRFAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGC 496
             Y   K     F++FPGS+ LL  +M+S GE M L + F  ++ K+  +   G    G 
Sbjct: 912 --YQAVKEAVLPFKRFPGSDTLLGPEMRSTGEVMGLAKDFGIAYAKSELAAGNGVPSDGV 969

Query: 497 SNVKELDWDWEQLKYSLR 514
           + +   D D + L+   R
Sbjct: 970 AFLSTNDLDKKNLEEVAR 987


>gi|123966133|ref|YP_001011214.1| carbamoyl-phosphate synthase, large subunit [Prochlorococcus marinus
            str. MIT 9515]
 gi|123200499|gb|ABM72107.1| carbamoyl-phosphate synthase, large subunit [Prochlorococcus marinus
            str. MIT 9515]
          Length = 1100

 Score = 1341 bits (3471), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 656/1104 (59%), Positives = 837/1104 (75%), Gaps = 30/1104 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            +R DL++ILILG+GPIVIGQACEFDYSGTQACKAL++ GYE+ILINSNPA+IMTDP +A+
Sbjct: 3    QRGDLKRILILGSGPIVIGQACEFDYSGTQACKALRKAGYEIILINSNPASIMTDPDIAN 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
            +TYI P+TPE+V Q++ KE+PDA+LPTMGGQTALNLAV L+ES  L+   VELIGA L A
Sbjct: 63   KTYIEPLTPEIVSQIILKEKPDAILPTMGGQTALNLAVKLSESNFLKNNNVELIGADLKA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR LFK++M+ I V   PSGI + L E + ++ +I  +PLIIRPAFTLGG GGGI
Sbjct: 123  INKAEDRKLFKESMEKINVNVCPSGIASDLVEAMKVSKQINSYPLIIRPAFTLGGVGGGI 182

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN EEF  +CK+GL  S ++Q+L+EKSL+GWKE+ELEVMRD +DNVVIICSIEN+DPMG
Sbjct: 183  AYNLEEFNDLCKSGLDESPSNQILIEKSLIGWKEFELEVMRDTSDNVVIICSIENLDPMG 242

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQRLRD S+ IIRE+GVE GGSN+QFAVNP +G+V+VIEMN
Sbjct: 243  VHTGDSITVAPAQTLTDKEYQRLRDLSLKIIREVGVETGGSNIQFAVNPNNGDVIVIEMN 302

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRF 447
            PRVSRSSALASKATGFPIAK+AA LSVGY+LD+I NDITKKTPA FEPSIDYVVTK+PRF
Sbjct: 303  PRVSRSSALASKATGFPIAKIAALLSVGYTLDEIINDITKKTPACFEPSIDYVVTKVPRF 362

Query: 448  AFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDWE 507
            AFEKF GS  +L T MKSVGE MA+GR+F+ESFQKALRSLE G  GW C ++++ + +  
Sbjct: 363  AFEKFKGSSNILNTAMKSVGETMAIGRSFEESFQKALRSLEIGIFGWECDSIEDFN-NEN 421

Query: 508  QLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVE-QFLLTQSV 566
             LK +LR P  +R+  +  AM+ G     I+E++ ID WFL + + + + + QFL  +++
Sbjct: 422  DLKNNLRNPTAERILIVKKAMEAGKSDSYINEITNIDLWFLEKLRNIFNFQNQFLKEKNL 481

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
            + + +D     K+ GFSD+QIA  T S   EVR  R  L ++P YK VDTC+AEF + TP
Sbjct: 482  NEIDRDLMLRAKQIGFSDQQIAKLTDSDFFEVRNYRKKLNILPLYKTVDTCSAEFSSETP 541

Query: 627  YMYSSYD---------FECESAPTQK----KKVLILGGGPNRIGQGIEFDYCCCHTSFSL 673
            Y YS+Y+         F    + + K    KK++ILGGGPNRIGQGIEFDYCCCH S+  
Sbjct: 542  YHYSTYEESFSESNLHFSDNESYSNKANPAKKIMILGGGPNRIGQGIEFDYCCCHASYQS 601

Query: 674  QSAGYETIMMNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLK 733
             S GY+TIM+NSNPETVSTDYDTSD LYFEP+T ED+LN+I+ E P G+IVQFGGQTPLK
Sbjct: 602  SSNGYQTIMVNSNPETVSTDYDTSDILYFEPVTFEDILNIIEAENPYGLIVQFGGQTPLK 661

Query: 734  LSLPIHQYLDEHRLPSASGDGL---VRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGG 790
            LSLP+  +L        S +GL    +I GTSP SID AEDRE F  I+K+L+I QP  G
Sbjct: 662  LSLPLSNWL-------KSKEGLKCNSKILGTSPLSIDIAEDREEFTKILKDLNIRQPLNG 714

Query: 791  IAKSEADALAIAKEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLID 850
            IA+++ +AL++++ IG+P+VVRPSYVLGGRAMEIV     L  Y+  AV+V P+ P+L+D
Sbjct: 715  IARTQEEALSVSQNIGFPLVVRPSYVLGGRAMEIVKDKIELSRYISEAVKVSPDHPILLD 774

Query: 851  KYLSDAIEIDVDALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSW 910
            +YLS+AIEIDVDAL D  G+VVI G+MEH+E AG+HSGDSAC +P+ ++S   L+T+  W
Sbjct: 775  QYLSNAIEIDVDALCDENGSVVIAGLMEHVEPAGIHSGDSACCLPSISLSQLTLETVKEW 834

Query: 911  TIKLAKRLNVCGLMNCQYAITT----SGDVYLLEANPRASRTVPFVSKAIGHPLAKYAAL 966
            T  +A RLNV GL+N Q+A+T       ++Y+LEANPRASRT+PFVSKAIG P+AK A  
Sbjct: 835  TKLIANRLNVVGLINLQFAVTNINHQENELYILEANPRASRTIPFVSKAIGKPVAKLATQ 894

Query: 967  VMSGKSLNDLGFTKEVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIA 1026
            +M G SL D+ +T+E+IPK+ +VKEAVLPF++F G D LLGPEMRSTGEVMG+   F +A
Sbjct: 895  LMQGSSLKDINYTEEIIPKYQAVKEAVLPFKRFPGSDTLLGPEMRSTGEVMGLAEDFGLA 954

Query: 1027 FAKAQIAAGQKLPLSGTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIA 1086
            +AK+++A+G  +P  G  FLS NDL K  LE IA+  + +GFK+++T GTA +L   GI 
Sbjct: 955  YAKSELASGNGVPSEGVAFLSTNDLDKDKLEEIARELIVLGFKLIATKGTASYLLNLGIE 1014

Query: 1087 VERVLKMHEGRPHAGDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSG 1146
            V+ VLK+HEGRP+  D++ +G IQ+++ T  G      D   LRR  L Y +P  TT+ G
Sbjct: 1015 VDEVLKVHEGRPNIEDLIRSGLIQLVINTPIGSQAFHDDAY-LRRAALEYNIPTFTTIPG 1073

Query: 1147 ALANAEAIRSLKSNTVTMTALQDF 1170
            A A  +AI+SL+ N +   +LQ+ 
Sbjct: 1074 AKAALQAIKSLRINKIDTLSLQEI 1097



 Score =  224 bits (570), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 145/442 (32%), Positives = 231/442 (52%), Gaps = 16/442 (3%)

Query: 75  SNGAASSKDQKLGKRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINS 134
           SN   S  +    K    +KI+ILG GP  IGQ  EFDY    A       GY+ I++NS
Sbjct: 554 SNLHFSDNESYSNKANPAKKIMILGGGPNRIGQGIEFDYCCCHASYQSSSNGYQTIMVNS 613

Query: 135 NPATIMTDPGLADRTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALA---ESG 191
           NP T+ TD   +D  Y  P+T E +  ++E E P  L+   GGQT L L++ L+   +S 
Sbjct: 614 NPETVSTDYDTSDILYFEPVTFEDILNIIEAENPYGLIVQFGGQTPLKLSLPLSNWLKSK 673

Query: 192 ALEKYGVELIGAKLDAIKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFP 251
              K   +++G    +I  AEDR+ F + +K + ++ P +GI  T +E +S++  IG FP
Sbjct: 674 EGLKCNSKILGTSPLSIDIAEDREEFTKILKDLNIRQPLNGIARTQEEALSVSQNIG-FP 732

Query: 252 LIIRPAFTLGGTGGGIAYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLA 311
           L++RP++ LGG    I  +K E        +  S    +L+++ L    E +++ + D  
Sbjct: 733 LVVRPSYVLGGRAMEIVKDKIELSRYISEAVKVSPDHPILLDQYLSNAIEIDVDALCDEN 792

Query: 312 DNVVIICSIENVDPMGVHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQ 371
            +VVI   +E+V+P G+H+GDS    P+ +L+    + +++++  I   + V  G  N+Q
Sbjct: 793 GSVVIAGLMEHVEPAGIHSGDSACCLPSISLSQLTLETVKEWTKLIANRLNV-VGLINLQ 851

Query: 372 FAV---NPVDGEVMVIEMNPRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKK 428
           FAV   N  + E+ ++E NPR SR+    SKA G P+AK+A +L  G SL  I N   + 
Sbjct: 852 FAVTNINHQENELYILEANPRASRTIPFVSKAIGKPVAKLATQLMQGSSLKDI-NYTEEI 910

Query: 429 TPASFEPSIDYVVTKIPRFAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLE 488
            P        Y   K     F++FPGS+ LL  +M+S GE M L   F  ++ K+  +  
Sbjct: 911 IPK-------YQAVKEAVLPFKRFPGSDTLLGPEMRSTGEVMGLAEDFGLAYAKSELASG 963

Query: 489 CGFSGWGCSNVKELDWDWEQLK 510
            G    G + +   D D ++L+
Sbjct: 964 NGVPSEGVAFLSTNDLDKDKLE 985


>gi|118580936|ref|YP_902186.1| carbamoyl-phosphate synthase large subunit [Pelobacter propionicus
            DSM 2379]
 gi|118503646|gb|ABL00129.1| carbamoyl-phosphate synthase large subunit [Pelobacter propionicus
            DSM 2379]
          Length = 1078

 Score = 1340 bits (3467), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 663/1092 (60%), Positives = 828/1092 (75%), Gaps = 25/1092 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++KILI+GAGPIVIGQACEFDYSGTQACKALKEEGYEV+L+NSNPATIMTDP  AD
Sbjct: 3    KRTDIKKILIIGAGPIVIGQACEFDYSGTQACKALKEEGYEVVLLNSNPATIMTDPDFAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+TPE++ +++EKERPDA+LPT+GGQTALN AVA+AESG LE++GVELIGAKL A
Sbjct: 63   HTYIEPVTPEILARIIEKERPDAILPTLGGQTALNTAVAVAESGILERFGVELIGAKLPA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            IKKAEDR LFKQAM+ IG+  P SG+ +   E + +   +G FP IIRP+FTLGG+GGGI
Sbjct: 123  IKKAEDRTLFKQAMENIGLAIPRSGLAHNRQEAMDVITCVG-FPAIIRPSFTLGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN EE+E +  AG+ AS T ++LVE+S++GWKEYELEVMRD ADNVVIICSIEN+DPMG
Sbjct: 182  AYNMEEYEKMAVAGIDASPTDEILVEESVIGWKEYELEVMRDTADNVVIICSIENLDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ LRD S+ IIREIGV+ GGSN+QF +NP DG ++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQILRDASLKIIREIGVDTGGSNIQFGINPNDGRLVVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRF 447
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT++TPA FEP+IDYVVTKIPRF
Sbjct: 302  PRVSRSSALASKATGFPIAKIAAKLAVGYTLDEVTNDITRETPACFEPAIDYVVTKIPRF 361

Query: 448  AFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSG-------WGCSNVK 500
             FEKFP +   LTTQMKSVGE MA+GRTF+ES QKALRSLE G SG        G    +
Sbjct: 362  TFEKFPAANATLTTQMKSVGEVMAIGRTFKESLQKALRSLEIGVSGLDSRLFDLGAETRR 421

Query: 501  ELDWDWEQLKY-SLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQ 559
             L    +QL    LR+PN +R+  +  A++ GM V++I   + ID WFL   +++++ E+
Sbjct: 422  ALTAKEQQLLLEKLRIPNSERLWYLADALRSGMTVEDIFRHTAIDPWFLHNIRQIVEKEE 481

Query: 560  FLLTQSVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAA 619
             L     + +++D+ +E K+ GF+DK +A     +E EVR  RLSLGV P YKRVDTCAA
Sbjct: 482  ELKRLDPAALSRDELFEAKQFGFADKTLAKLWNRSEDEVRSLRLSLGVKPVYKRVDTCAA 541

Query: 620  EFEANTPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYE 679
            EF A+TPY+YS+Y+ ECE+ PT ++K++ILGGGPNRIGQGIEFDYCC H  F+L   G+E
Sbjct: 542  EFVAHTPYLYSTYEEECEAEPTDRRKIMILGGGPNRIGQGIEFDYCCVHGVFALAEDGFE 601

Query: 680  TIMMNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIH 739
            TIM+N NPETVSTDYDTSDRLYFEPLT+EDVL+++ +E+P G+IVQFGGQTPLKL++ + 
Sbjct: 602  TIMVNCNPETVSTDYDTSDRLYFEPLTLEDVLSIVAVEKPFGVIVQFGGQTPLKLAVALE 661

Query: 740  QYLDEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADAL 799
            +               V I GTSPD+ID AEDRERF  ++ +L + QP+ GIA+S  +A 
Sbjct: 662  K-------------AGVPIIGTSPDAIDRAEDRERFQEMLFKLELLQPENGIARSFEEAE 708

Query: 800  AIAKEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEI 859
              A+ IGYPVVVRPSYVLGGRAMEIVY  + L  Y+  AV+  PE P+LIDK+L +AIEI
Sbjct: 709  KAAERIGYPVVVRPSYVLGGRAMEIVYDVDNLRRYMTTAVQASPEHPILIDKFLDEAIEI 768

Query: 860  DVDALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLN 919
            DVDAL D    VVIGGIMEHIE+AG+HSGDSAC +P  +IS   +  I   T  +A  LN
Sbjct: 769  DVDALCDGT-EVVIGGIMEHIEEAGIHSGDSACSLPPYSISPEMVAEIRRQTSLMALELN 827

Query: 920  VCGLMNCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFT 979
            V GLMN QYAI   G VY+LE NPRASRT PFVSKA G PLAK AA +M+GKSL +LG +
Sbjct: 828  VKGLMNVQYAI-KDGRVYILEVNPRASRTAPFVSKATGRPLAKIAARIMAGKSLKELGVS 886

Query: 980  KEVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLP 1039
             +++P+HVSVKEAV PF KF G D LLGPEM+STGEVMGI  SF  AFAKAQ+ A  +LP
Sbjct: 887  GDIVPRHVSVKEAVFPFVKFPGVDTLLGPEMKSTGEVMGIGDSFADAFAKAQLGANVRLP 946

Query: 1040 LSGTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPH 1099
            L G  F+S+ +  K H+   A+     GF I++T GTA +L  KGI V+R+ K+ EGRPH
Sbjct: 947  LKGNAFISVRNADKKHVVTAAEKLYKAGFGILATDGTASYLAEKGIPVKRINKVLEGRPH 1006

Query: 1100 AGDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKS 1159
              D + NG+I +++ T+ G +   +D   +RR  L + +   TTV+GA A  ++I +LK 
Sbjct: 1007 VVDAIKNGEINLVINTTQG-AQAVVDSFSIRREALMHNIAYYTTVAGAKAVVDSIIALKE 1065

Query: 1160 NTVTMTALQDFF 1171
            + + + +LQD+ 
Sbjct: 1066 HELGVKSLQDYL 1077


>gi|157413412|ref|YP_001484278.1| carbamoyl-phosphate synthase, large subunit [Prochlorococcus marinus
            str. MIT 9215]
 gi|157387987|gb|ABV50692.1| carbamoyl-phosphate synthase, large subunit [Prochlorococcus marinus
            str. MIT 9215]
          Length = 1098

 Score = 1339 bits (3465), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 662/1104 (59%), Positives = 842/1104 (76%), Gaps = 28/1104 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            +R DL+KILILG+GPIVIGQACEFDYSGTQACKAL+  GYE+ILINSNPA+IMTDP +A+
Sbjct: 3    QRGDLKKILILGSGPIVIGQACEFDYSGTQACKALRNAGYEIILINSNPASIMTDPDIAN 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
            +TYI P+T E+V Q++ KE+PDA+LPTMGGQTALNLAV L+ES  L++  +ELIGA L A
Sbjct: 63   KTYIEPLTSEIVSQIILKEKPDAILPTMGGQTALNLAVKLSESDFLKQNNIELIGADLRA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR LFK++M+ I V   PSGI + LDE + ++ EI  +PLIIRPAFTLGG GGGI
Sbjct: 123  INKAEDRKLFKESMEKINVNVCPSGIASDLDEAMEVSKEISSYPLIIRPAFTLGGVGGGI 182

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            A+N EEF  +CK+GL  S ++Q+L+EKSL+GWKEYELEVMRD ADNVVI+CSIEN+DPMG
Sbjct: 183  AFNLEEFVELCKSGLEESPSNQILIEKSLIGWKEYELEVMRDTADNVVIVCSIENLDPMG 242

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQRLRD S+ IIRE+GVE GGSN+QFA+NP +G+V+VIEMN
Sbjct: 243  VHTGDSITVAPAQTLTDKEYQRLRDLSLKIIREVGVETGGSNIQFAINPTNGDVIVIEMN 302

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRF 447
            PRVSRSSALASKATGFPIAK+AA LSVGY+LD+I NDITKKTPA FEPSIDYVVTKIPRF
Sbjct: 303  PRVSRSSALASKATGFPIAKIAALLSVGYTLDEIINDITKKTPACFEPSIDYVVTKIPRF 362

Query: 448  AFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDWE 507
            AFEKF GS   L+T MKSVGE+MA+GR+F+ESFQKALRSLE G  GW C ++ E   +  
Sbjct: 363  AFEKFKGSSKTLSTAMKSVGESMAIGRSFEESFQKALRSLEVGVFGWECDSLDEFK-NES 421

Query: 508  QLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQ-FLLTQSV 566
             +K SLR P  +R+  I  AM+ G     I+E++ ID WF+ + + + + E  FL  + +
Sbjct: 422  HIKNSLRNPTCERIFLIKKAMQLGKTNSYIYEVTNIDLWFIEKLRNIFNFENDFLKEKEL 481

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
             ++ +D     K+ GFSD+QIA  T S   EVR  R  L +IP YK VDTC+AEF ++TP
Sbjct: 482  YSLDRDLMLHAKQLGFSDQQIAKLTNSEFFEVRRYRKKLNIIPIYKTVDTCSAEFSSSTP 541

Query: 627  YMYSSYD----------FECE-SAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQS 675
            Y YS+Y+          F+ E S   + KK++ILGGGPNRIGQGIEFDYCCCH S+   +
Sbjct: 542  YHYSTYEESFLNSNSQIFDSEISENCESKKIMILGGGPNRIGQGIEFDYCCCHASYQAST 601

Query: 676  AGYETIMMNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLS 735
             GY+TIM+NSNPETVSTDYDTSD LYFEP+T+EDVLN+I+ E P G+IVQFGGQTPLK+S
Sbjct: 602  NGYKTIMVNSNPETVSTDYDTSDILYFEPVTLEDVLNIIEAENPYGLIVQFGGQTPLKIS 661

Query: 736  LPIHQYLDEHRLPSASGDGL---VRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIA 792
            LP++++L        S DG     +I GTSP SID AEDRE F  I++ELSI QP  GIA
Sbjct: 662  LPLYEWL-------KSNDGAKTGSKILGTSPISIDLAEDREEFTKILEELSIRQPLNGIA 714

Query: 793  KSEADALAIAKEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKY 852
            +++ +A  +AK IG+P+VVRPSYVLGGRAMEIV  +  L  Y+  AV+V P+ P+L+D+Y
Sbjct: 715  RNQDEAEIVAKNIGFPLVVRPSYVLGGRAMEIVKDENELSRYINEAVKVSPDHPILLDQY 774

Query: 853  LSDAIEIDVDALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTI 912
            L++AIEIDVDAL DS G+VVI G+MEH+E AG+HSGDSAC +P+ ++S S ++ +  WT 
Sbjct: 775  LNNAIEIDVDALCDSNGSVVIAGLMEHVEPAGIHSGDSACCLPSISLSLSTIENVRKWTK 834

Query: 913  KLAKRLNVCGLMNCQYAITTSGD----VYLLEANPRASRTVPFVSKAIGHPLAKYAALVM 968
             +A+RLNV GL+N Q+A+T + +    +++LEANPRASRTVPFVSKAIG P+AK A  +M
Sbjct: 835  LIAQRLNVVGLINLQFAVTNTNNKENKLFILEANPRASRTVPFVSKAIGKPIAKLATQLM 894

Query: 969  SGKSLNDLGFTKEVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFA 1028
             G +L D+ FT+E+ PK+ +VKEAVLPF++F G D LLGPEMRSTGEVMG+   F IA+A
Sbjct: 895  QGFTLEDINFTQEISPKYQAVKEAVLPFKRFPGSDTLLGPEMRSTGEVMGLAKDFGIAYA 954

Query: 1029 KAQIAAGQKLPLSGTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVE 1088
            K+++AAG  +P  G  FLS NDL K +LE IA+  L +GFK+++T GTA +L   GI V+
Sbjct: 955  KSELAAGNGVPSEGVAFLSTNDLDKKNLEEIAQELLILGFKLIATKGTASYLVNLGIQVD 1014

Query: 1089 RVLKMHEGRPHAGDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGAL 1148
             VLK+HEGRP+  D++ +G +Q+++ T  G      D   LRR  L Y +P  TT+ GA 
Sbjct: 1015 EVLKVHEGRPNIEDLIRSGLVQLIINTPIGSQALHDDAY-LRRAALEYNIPTFTTIPGAK 1073

Query: 1149 ANAEAIRSLKSNTVTMTALQDFFD 1172
            A  +AI++L+SN V   +LQ+  +
Sbjct: 1074 AAIKAIKALQSNKVYAYSLQEIHN 1097



 Score =  228 bits (582), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 143/434 (32%), Positives = 232/434 (53%), Gaps = 16/434 (3%)

Query: 83  DQKLGKRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTD 142
           D ++ +  + +KI+ILG GP  IGQ  EFDY    A       GY+ I++NSNP T+ TD
Sbjct: 560 DSEISENCESKKIMILGGGPNRIGQGIEFDYCCCHASYQASTNGYKTIMVNSNPETVSTD 619

Query: 143 PGLADRTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAE---SGALEKYGVE 199
              +D  Y  P+T E V  ++E E P  L+   GGQT L +++ L E   S    K G +
Sbjct: 620 YDTSDILYFEPVTLEDVLNIIEAENPYGLIVQFGGQTPLKISLPLYEWLKSNDGAKTGSK 679

Query: 200 LIGAKLDAIKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFT 259
           ++G    +I  AEDR+ F + ++ + ++ P +GI    DE   +A  IG FPL++RP++ 
Sbjct: 680 ILGTSPISIDLAEDREEFTKILEELSIRQPLNGIARNQDEAEIVAKNIG-FPLVVRPSYV 738

Query: 260 LGGTGGGIAYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICS 319
           LGG    I  ++ E        +  S    +L+++ L    E +++ + D   +VVI   
Sbjct: 739 LGGRAMEIVKDENELSRYINEAVKVSPDHPILLDQYLNNAIEIDVDALCDSNGSVVIAGL 798

Query: 320 IENVDPMGVHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAV---NP 376
           +E+V+P G+H+GDS    P+ +L+    + +R ++  I + + V  G  N+QFAV   N 
Sbjct: 799 MEHVEPAGIHSGDSACCLPSISLSLSTIENVRKWTKLIAQRLNV-VGLINLQFAVTNTNN 857

Query: 377 VDGEVMVIEMNPRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPS 436
            + ++ ++E NPR SR+    SKA G PIAK+A +L  G++L+ I  + T+      E S
Sbjct: 858 KENKLFILEANPRASRTVPFVSKAIGKPIAKLATQLMQGFTLEDI--NFTQ------EIS 909

Query: 437 IDYVVTKIPRFAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGC 496
             Y   K     F++FPGS+ LL  +M+S GE M L + F  ++ K+  +   G    G 
Sbjct: 910 PKYQAVKEAVLPFKRFPGSDTLLGPEMRSTGEVMGLAKDFGIAYAKSELAAGNGVPSEGV 969

Query: 497 SNVKELDWDWEQLK 510
           + +   D D + L+
Sbjct: 970 AFLSTNDLDKKNLE 983


>gi|148263921|ref|YP_001230627.1| carbamoyl-phosphate synthase large subunit [Geobacter uraniireducens
            Rf4]
 gi|146397421|gb|ABQ26054.1| carbamoyl-phosphate synthase large subunit [Geobacter uraniireducens
            Rf4]
          Length = 1082

 Score = 1338 bits (3464), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 672/1096 (61%), Positives = 817/1096 (74%), Gaps = 29/1096 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++KILI+GAGPIVIGQACEFDYSGTQACKALKEEG++V+L+NSNPATIMTDP  AD
Sbjct: 3    KRTDIKKILIIGAGPIVIGQACEFDYSGTQACKALKEEGFQVVLLNSNPATIMTDPDFAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
            RTYI P+TPE++  ++EKERPDA+LPT+GGQTALN AVA+AESG LEKYGVELIGAKL A
Sbjct: 63   RTYIEPVTPEILAMIIEKERPDAVLPTLGGQTALNTAVAVAESGVLEKYGVELIGAKLPA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            IK AEDR LFK+AM+ I +  P SG+ +   E + I  EIG FP IIRP+FTLGGTGGGI
Sbjct: 123  IKMAEDRTLFKEAMQRINLTVPRSGLAHNHAEAMEIIKEIG-FPAIIRPSFTLGGTGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN EE+E +  AG+ AS TS++L+E+S++GWKEYELEVMRD ADNVVIICSIEN DPMG
Sbjct: 182  AYNMEEYEKMSVAGIEASPTSEILIEESVIGWKEYELEVMRDTADNVVIICSIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ LRD S+ IIREIGV+ GGSN+QF +NP DG ++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQILRDASLKIIREIGVDTGGSNIQFGINPRDGRLVVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRF 447
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD+I NDIT++TPA FEP+IDYVVTK+PRF
Sbjct: 302  PRVSRSSALASKATGFPIAKIAAKLAVGYTLDEITNDITRETPACFEPTIDYVVTKVPRF 361

Query: 448  AFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGW-------GCSNVK 500
             FEKFP ++  LTTQMKSVGE MA+GRTF+ES QKA+RSLE G SG+            +
Sbjct: 362  TFEKFPAADATLTTQMKSVGEVMAIGRTFKESLQKAIRSLEIGSSGFESRLFDSKAETRR 421

Query: 501  ELDWDWEQLKY-SLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQ 559
             L    +QL    LR PN +R+  +  A + GM V+EI  ++  D WFL   K++ID E 
Sbjct: 422  ALTGKEQQLLMEKLRTPNWERLWYLGDAFRSGMTVEEIFAVTAFDPWFLHNIKQIIDKED 481

Query: 560  FLLTQSVSNMTKDDFYEV----KRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVD 615
             L   +V     D+  EV    K+ GFSDK +      TE EVR+ RLSLG+ P +KRVD
Sbjct: 482  ELKQVNVEEEANDNLKEVIREAKQYGFSDKHLGNLWGKTEDEVRQLRLSLGIKPVFKRVD 541

Query: 616  TCAAEFEANTPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQS 675
            TCAAEF A TPY+YS+Y+ ECE+ PT +KK++ILGGGPNRIGQGIEFDYCC H  F+L  
Sbjct: 542  TCAAEFVAYTPYLYSTYEEECEAEPTDRKKIMILGGGPNRIGQGIEFDYCCVHGVFALAE 601

Query: 676  AGYETIMMNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLS 735
             GYETIM+N NPETVSTDYDTSDRLYFEPLT EDVLN+++LE+PEG+IVQFGGQTPLKL+
Sbjct: 602  DGYETIMVNCNPETVSTDYDTSDRLYFEPLTYEDVLNIVELEKPEGVIVQFGGQTPLKLA 661

Query: 736  LPIHQYLDEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSE 795
            + + +               V I GTSPD+ID AEDRERF  ++ +L + QP+ G A+S 
Sbjct: 662  VSLEK-------------AGVPIIGTSPDAIDRAEDRERFQEMLHKLGLRQPENGTARSF 708

Query: 796  ADALAIAKEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSD 855
             +A  +A  IGYPVVVRPSYVLGGRAMEIVY  + L  Y+  AV+  PE P+LIDK+L +
Sbjct: 709  EEAEKVADRIGYPVVVRPSYVLGGRAMEIVYDVDNLRRYMHTAVQASPEHPILIDKFLDE 768

Query: 856  AIEIDVDALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLA 915
            AIEIDVDAL D     VIGGIMEHIE+AG+HSGDSAC +P  +IS    D I   T  +A
Sbjct: 769  AIEIDVDALCDGT-EAVIGGIMEHIEEAGIHSGDSACSLPPYSISREIADEIRRQTKMMA 827

Query: 916  KRLNVCGLMNCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLND 975
              LNV GLMN QYAI     +Y+LE NPRASRT PFVSKA G PLAK AA +MSGK+L +
Sbjct: 828  LELNVRGLMNVQYAIKDDV-IYILEVNPRASRTAPFVSKATGRPLAKLAARIMSGKTLRE 886

Query: 976  LGFTKEVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAG 1035
            LG T+E+ P H+SVKEAV PF KF G D +LGPEM+STGEVMGID +F  AFAKAQ+ AG
Sbjct: 887  LGITEEIEPTHISVKEAVFPFVKFPGVDTILGPEMKSTGEVMGIDDNFAKAFAKAQLGAG 946

Query: 1036 QKLPLSGTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHE 1095
             KLP SG VF+S+ D  K H+   AK   D GF++V+T GTA +L+ KGI V  V K+ E
Sbjct: 947  VKLPTSGKVFISVRDADKKHIVSAAKKLYDNGFELVATRGTAAYLQEKGIPVLVVNKVLE 1006

Query: 1096 GRPHAGDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIR 1155
            GRPH  D + N +I M++ T+ G +    D   +RR  L   +   TT SGA A  + I 
Sbjct: 1007 GRPHIVDSIKNNEICMVINTTQG-AQAVADSFSIRRNALVSNIAYYTTASGARAVVDGII 1065

Query: 1156 SLKSNTVTMTALQDFF 1171
            +++   +++  +QD+ 
Sbjct: 1066 AMRQEELSVKPIQDYL 1081


>gi|123968578|ref|YP_001009436.1| carbamoyl-phosphate synthase, large subunit [Prochlorococcus marinus
            str. AS9601]
 gi|123198688|gb|ABM70329.1| carbamoyl-phosphate synthase, large subunit [Prochlorococcus marinus
            str. AS9601]
          Length = 1098

 Score = 1337 bits (3459), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 659/1104 (59%), Positives = 838/1104 (75%), Gaps = 28/1104 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            +R DL+KILILG+GPIVIGQACEFDYSGTQACKAL+  GYEV+LINSNPA+IMTDP +A 
Sbjct: 3    QRGDLKKILILGSGPIVIGQACEFDYSGTQACKALRNAGYEVVLINSNPASIMTDPEIAS 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
            +TYI P+TPE+V Q++ +E+PDA+LPTMGGQTALNLAV L+ES  L++  VELIGA L A
Sbjct: 63   KTYIEPLTPEIVSQIILREKPDAILPTMGGQTALNLAVKLSESDFLKENNVELIGADLRA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR LFK++M+ I V   PSGI + LDE + ++ +I  +PLIIRPAFTLGG GGGI
Sbjct: 123  INKAEDRKLFKESMEKINVNVCPSGIASNLDEAVEVSKKISSYPLIIRPAFTLGGVGGGI 182

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            A+N EEF  +CK+GL  S ++Q+L+EKSL+GWKE+ELEVMRD ADNVVIICSIEN+DPMG
Sbjct: 183  AFNLEEFVVLCKSGLEESPSNQILIEKSLIGWKEFELEVMRDTADNVVIICSIENLDPMG 242

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQRLRD S+ IIRE+GVE GGSN+QFA+NP +GEV+VIEMN
Sbjct: 243  VHTGDSITVAPAQTLTDKEYQRLRDLSLKIIREVGVETGGSNIQFALNPSNGEVIVIEMN 302

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRF 447
            PRVSRSSALASKATGFPIAK+AA LSVGY+LD+I NDITKKTPA FEPSIDYVVTKIPRF
Sbjct: 303  PRVSRSSALASKATGFPIAKIAALLSVGYTLDEIINDITKKTPACFEPSIDYVVTKIPRF 362

Query: 448  AFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDWE 507
            AFEKF GS   L+T MKSVGE+MA+GR+F+ESFQKALRSLE G  GW C ++ E   +  
Sbjct: 363  AFEKFKGSTNTLSTAMKSVGESMAIGRSFEESFQKALRSLEVGVFGWECDSLDEFK-NES 421

Query: 508  QLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVE-QFLLTQSV 566
             +K SLR P  +R+  +  AM+ G     I E++ ID WF+ + + + + E +FL  + +
Sbjct: 422  HIKNSLRNPTSERILMVKKAMQLGKTNSYIQEVTNIDLWFIEKLRNIFNFENEFLKEKEL 481

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
              + +D     K+ GFSD+QIA  T S   EVR  R  L +IP YK VDTC+AEF ++TP
Sbjct: 482  YTLDRDLMLHAKQLGFSDQQIAKLTNSDFFEVRRYRKKLNIIPIYKNVDTCSAEFSSSTP 541

Query: 627  YMYSSYD----------FECE-SAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQS 675
            Y YS+Y+          F+ E S  ++ KK++ILGGGPNRIGQGIEFDYCCCH S+   +
Sbjct: 542  YHYSTYEEAFINFNSQTFDSEISENSKSKKIMILGGGPNRIGQGIEFDYCCCHASYQAST 601

Query: 676  AGYETIMMNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLS 735
             GY+TIM+NSNPETVSTDYDTSD LYFEP+T+EDVLN+I+ E P G+IVQFGGQTPLKLS
Sbjct: 602  NGYKTIMVNSNPETVSTDYDTSDILYFEPVTLEDVLNIIEAENPYGLIVQFGGQTPLKLS 661

Query: 736  LPIHQYLDEHRLPSASGDGL---VRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIA 792
            LP+ ++L        S +GL    +I GTSP SID AEDRE F  I+KEL+I QP  GIA
Sbjct: 662  LPLSEWL-------KSNEGLRTGSKILGTSPISIDLAEDREEFTKILKELAIRQPLNGIA 714

Query: 793  KSEADALAIAKEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKY 852
             ++ +A  +AK IG+P+VVRPSYVLGGRAMEIV  +  L  Y+  AV+V P+ P+L+D+Y
Sbjct: 715  HNQKEAAVVAKNIGFPLVVRPSYVLGGRAMEIVKDENELSRYISEAVKVSPDHPILLDQY 774

Query: 853  LSDAIEIDVDALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTI 912
            L++AIEIDVDAL DS G+VVI G+MEH+E AG+HSGDSAC +P+ ++S S ++ +  WT 
Sbjct: 775  LNNAIEIDVDALCDSEGSVVIAGLMEHVEPAGIHSGDSACCLPSISLSKSTIENVKKWTK 834

Query: 913  KLAKRLNVCGLMNCQYAITTSGD----VYLLEANPRASRTVPFVSKAIGHPLAKYAALVM 968
             +A+RLNV GL+N Q+A+T + +    +++LEANPRASRTVPFVSKAIG P+AK A  +M
Sbjct: 835  LIAQRLNVVGLINLQFAVTNTNNKEKKLFILEANPRASRTVPFVSKAIGKPVAKLATQLM 894

Query: 969  SGKSLNDLGFTKEVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFA 1028
             G +L D+ FT+E  PK+ +VKEAVLPF++F G D LLGPEM+STGEVMG+   F IA+A
Sbjct: 895  QGFTLEDVNFTQEFYPKYQAVKEAVLPFKRFPGSDTLLGPEMKSTGEVMGLAKDFGIAYA 954

Query: 1029 KAQIAAGQKLPLSGTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVE 1088
            K+++AAG  +P  G  FLS NDL K  LE +A+  + +GFK+++T GTA +L   GI VE
Sbjct: 955  KSELAAGNGVPSEGVAFLSTNDLDKKLLEEVARELMILGFKLIATKGTAAYLINLGIQVE 1014

Query: 1089 RVLKMHEGRPHAGDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGAL 1148
             VLK+HEGRP+  D++ +G +Q+++ T  G      D   LRR  L Y +P  TT+ GA 
Sbjct: 1015 EVLKVHEGRPNIEDLIRSGLVQLIINTPIGSQALHDDAY-LRRAALEYNIPTFTTIPGAK 1073

Query: 1149 ANAEAIRSLKSNTVTMTALQDFFD 1172
            A  +AI++L+ N +   +LQ+  +
Sbjct: 1074 AAIKAIKALQCNNIDSYSLQEIHN 1097



 Score =  228 bits (582), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 154/487 (31%), Positives = 250/487 (51%), Gaps = 31/487 (6%)

Query: 35  LYSNKKTGSLSLRSWPP-QLTRYSRSRVRASSAKIDSSAELSNGAASSKDQKLGKRTDLR 93
           +Y N  T S    S  P   + Y  + +  +S   DS  E+S  + S            +
Sbjct: 525 IYKNVDTCSAEFSSSTPYHYSTYEEAFINFNSQTFDS--EISENSKS------------K 570

Query: 94  KILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLADRTYITP 153
           KI+ILG GP  IGQ  EFDY    A       GY+ I++NSNP T+ TD   +D  Y  P
Sbjct: 571 KIMILGGGPNRIGQGIEFDYCCCHASYQASTNGYKTIMVNSNPETVSTDYDTSDILYFEP 630

Query: 154 MTPELVEQVLEKERPDALLPTMGGQTALNLAVALAE---SGALEKYGVELIGAKLDAIKK 210
           +T E V  ++E E P  L+   GGQT L L++ L+E   S    + G +++G    +I  
Sbjct: 631 VTLEDVLNIIEAENPYGLIVQFGGQTPLKLSLPLSEWLKSNEGLRTGSKILGTSPISIDL 690

Query: 211 AEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGIAYN 270
           AEDR+ F + +K + ++ P +GI +   E   +A  IG FPL++RP++ LGG    I  +
Sbjct: 691 AEDREEFTKILKELAIRQPLNGIAHNQKEAAVVAKNIG-FPLVVRPSYVLGGRAMEIVKD 749

Query: 271 KEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMGVHT 330
           + E        +  S    +L+++ L    E +++ + D   +VVI   +E+V+P G+H+
Sbjct: 750 ENELSRYISEAVKVSPDHPILLDQYLNNAIEIDVDALCDSEGSVVIAGLMEHVEPAGIHS 809

Query: 331 GDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAV---NPVDGEVMVIEMN 387
           GDS    P+ +L+    + ++ ++  I + + V  G  N+QFAV   N  + ++ ++E N
Sbjct: 810 GDSACCLPSISLSKSTIENVKKWTKLIAQRLNV-VGLINLQFAVTNTNNKEKKLFILEAN 868

Query: 388 PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRF 447
           PR SR+    SKA G P+AK+A +L  G++L+ +  + T++    F P   Y   K    
Sbjct: 869 PRASRTVPFVSKAIGKPVAKLATQLMQGFTLEDV--NFTQE----FYPK--YQAVKEAVL 920

Query: 448 AFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDWE 507
            F++FPGS+ LL  +MKS GE M L + F  ++ K+  +   G    G + +   D D +
Sbjct: 921 PFKRFPGSDTLLGPEMKSTGEVMGLAKDFGIAYAKSELAAGNGVPSEGVAFLSTNDLDKK 980

Query: 508 QLKYSLR 514
            L+   R
Sbjct: 981 LLEEVAR 987


>gi|78779359|ref|YP_397471.1| carbamoyl-phosphate synthase large subunit [Prochlorococcus marinus
            str. MIT 9312]
 gi|78712858|gb|ABB50035.1| carbamoyl-phosphate synthase large subunit [Prochlorococcus marinus
            str. MIT 9312]
          Length = 1098

 Score = 1336 bits (3457), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 660/1104 (59%), Positives = 837/1104 (75%), Gaps = 28/1104 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            +R DL+KILILG+GPIVIGQACEFDYSGTQACKAL++ GYE+ILINSNPA+IMTDP +A 
Sbjct: 3    QRGDLKKILILGSGPIVIGQACEFDYSGTQACKALRKAGYEIILINSNPASIMTDPEVAS 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
            +TYI P+TPE++ Q++ +E+PDA+LPTMGGQTALNLAV L+ES  L+K  VELIGA L A
Sbjct: 63   KTYIEPLTPEIISQIILREKPDAILPTMGGQTALNLAVKLSESDFLKKNNVELIGADLKA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR LFK++M+ I V   PSGI + L E   +  +I  +PLIIRPAFTLGG GGGI
Sbjct: 123  INKAEDRKLFKESMEKINVNVCPSGIASNLAEAKEVQKKINSYPLIIRPAFTLGGVGGGI 182

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            A+N EEF  +C  GL  S   Q+L+EKSL+GWKE+ELEVMRD ADNVVI+CSIEN+DPMG
Sbjct: 183  AFNLEEFIELCTTGLEESPRDQILIEKSLIGWKEFELEVMRDTADNVVIVCSIENLDPMG 242

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQRLRD S+ IIRE+GVE GGSN+QFA+NP +GEV+VIEMN
Sbjct: 243  VHTGDSITVAPAQTLTDKEYQRLRDMSLKIIREVGVETGGSNIQFAINPSNGEVIVIEMN 302

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRF 447
            PRVSRSSALASKATGFPIAK+AA LSVGY+LD+I NDITKKTPA FEPSIDYVVTKIPRF
Sbjct: 303  PRVSRSSALASKATGFPIAKIAALLSVGYTLDEIINDITKKTPACFEPSIDYVVTKIPRF 362

Query: 448  AFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDWE 507
            AFEKF GS   LTT MKSVGE+MA+GR+F+ESFQKALRSLE G  GW C ++ E   +  
Sbjct: 363  AFEKFKGSSNTLTTSMKSVGESMAIGRSFEESFQKALRSLEVGIFGWECDSLDEFK-NEN 421

Query: 508  QLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVE-QFLLTQSV 566
             +  SLR P  +R+  +  AM+ G     I E++ +D WF+ + + + + E +FL  + +
Sbjct: 422  HINNSLRTPTSERILIVKKAMQIGKTNSYIQEVTNLDSWFIEKLRNIFNFENEFLKEKGL 481

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
             ++ +D     K+ GFSD+QIA  TKS   EVR+ R  L +IP YK VDTC+AEF ++TP
Sbjct: 482  IDLDRDLMLNAKQLGFSDQQIAKLTKSDFFEVRKYRKDLNIIPIYKTVDTCSAEFSSSTP 541

Query: 627  YMYSSYD----------FECESAPTQK-KKVLILGGGPNRIGQGIEFDYCCCHTSFSLQS 675
            Y YS+Y+          F+ E +   K KK++ILGGGPNRIGQGIEFDYCCCH S+   +
Sbjct: 542  YHYSTYEESFINLNSEIFDSEISDNNKSKKIMILGGGPNRIGQGIEFDYCCCHASYQAST 601

Query: 676  AGYETIMMNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLS 735
            +GY+TIM+NSNPETVSTDYDTSD LYFEP+T+EDVLN+I+ E P G+IVQFGGQTPLKLS
Sbjct: 602  SGYKTIMVNSNPETVSTDYDTSDILYFEPVTLEDVLNIIEAENPYGLIVQFGGQTPLKLS 661

Query: 736  LPIHQYLDEHRLPSASGDGL---VRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIA 792
            LP+ ++L        + +GL    +I GTSP SID AEDRE F  I++ELSI QP  GIA
Sbjct: 662  LPLFEWL-------KTDEGLKTGTKILGTSPISIDIAEDREEFTNILEELSIRQPLNGIA 714

Query: 793  KSEADALAIAKEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKY 852
            +++ +A  +AK IG+P+VVRPSYVLGGRAMEIV  +  L  Y+  AV+V P+ P+L+D+Y
Sbjct: 715  RNQDEAQKVAKNIGFPLVVRPSYVLGGRAMEIVKDENELSRYISEAVKVSPDHPILLDQY 774

Query: 853  LSDAIEIDVDALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTI 912
            L++AIEIDVDAL DS G+VVI G+MEH+E AG+HSGDSAC +P+ ++S S +D + +WT 
Sbjct: 775  LNNAIEIDVDALCDSEGSVVIAGLMEHVEPAGIHSGDSACCLPSISLSESTIDNVKTWTK 834

Query: 913  KLAKRLNVCGLMNCQYAITTSGD----VYLLEANPRASRTVPFVSKAIGHPLAKYAALVM 968
             +A++LNV GL+N Q+A+T   +    +++LEANPRASRTVPFVSKAIG P+AK A  +M
Sbjct: 835  LIAQKLNVVGLINLQFAVTNLNNKENKLFILEANPRASRTVPFVSKAIGKPVAKLATQLM 894

Query: 969  SGKSLNDLGFTKEVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFA 1028
             G +L D+ FTKE  PK  +VKEAVLPF++F G D LLGPEMRSTGEVMG+   F IA+A
Sbjct: 895  QGLTLEDINFTKEFSPKFQAVKEAVLPFKRFPGSDTLLGPEMRSTGEVMGLAKDFGIAYA 954

Query: 1029 KAQIAAGQKLPLSGTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVE 1088
            K+++AAG  +P  G  FLS NDL K +LE IA+  L +GFK+++T GTA +L   GI VE
Sbjct: 955  KSELAAGNGVPSEGVAFLSTNDLDKKNLEEIARELLILGFKLIATKGTAAYLVDLGINVE 1014

Query: 1089 RVLKMHEGRPHAGDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGAL 1148
            +VLK+HEGRP+  D++ +G +Q+++ T  G      D   LRR  L Y +P  TT+ GA 
Sbjct: 1015 KVLKVHEGRPNIEDLIRSGLVQLIINTPIGSQALHDDAY-LRRAALEYNIPTFTTIPGAK 1073

Query: 1149 ANAEAIRSLKSNTVTMTALQDFFD 1172
            A  +AI++L+SN +   +LQ+  +
Sbjct: 1074 AAIKAIKALQSNKINTYSLQEIHE 1097



 Score =  226 bits (577), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 150/469 (31%), Positives = 242/469 (51%), Gaps = 30/469 (6%)

Query: 48  SWPPQLTRYSRSRVRASSAKIDSSAELSNGAASSKDQKLGKRTDLRKILILGAGPIVIGQ 107
           S P   + Y  S +  +S   DS  E+S+   S            +KI+ILG GP  IGQ
Sbjct: 539 STPYHYSTYEESFINLNSEIFDS--EISDNNKS------------KKIMILGGGPNRIGQ 584

Query: 108 ACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLADRTYITPMTPELVEQVLEKER 167
             EFDY    A       GY+ I++NSNP T+ TD   +D  Y  P+T E V  ++E E 
Sbjct: 585 GIEFDYCCCHASYQASTSGYKTIMVNSNPETVSTDYDTSDILYFEPVTLEDVLNIIEAEN 644

Query: 168 PDALLPTMGGQTALNLAVALAESGALE---KYGVELIGAKLDAIKKAEDRDLFKQAMKTI 224
           P  L+   GGQT L L++ L E    +   K G +++G    +I  AEDR+ F   ++ +
Sbjct: 645 PYGLIVQFGGQTPLKLSLPLFEWLKTDEGLKTGTKILGTSPISIDIAEDREEFTNILEEL 704

Query: 225 GVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGIAYNKEEFEAICKAGLAA 284
            ++ P +GI    DE   +A  IG FPL++RP++ LGG    I  ++ E        +  
Sbjct: 705 SIRQPLNGIARNQDEAQKVAKNIG-FPLVVRPSYVLGGRAMEIVKDENELSRYISEAVKV 763

Query: 285 SLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMGVHTGDSITVAPAQTLTD 344
           S    +L+++ L    E +++ + D   +VVI   +E+V+P G+H+GDS    P+ +L++
Sbjct: 764 SPDHPILLDQYLNNAIEIDVDALCDSEGSVVIAGLMEHVEPAGIHSGDSACCLPSISLSE 823

Query: 345 KEYQRLRDYSIAIIREIGVECGGSNVQFAV---NPVDGEVMVIEMNPRVSRSSALASKAT 401
                ++ ++  I +++ V  G  N+QFAV   N  + ++ ++E NPR SR+    SKA 
Sbjct: 824 STIDNVKTWTKLIAQKLNV-VGLINLQFAVTNLNNKENKLFILEANPRASRTVPFVSKAI 882

Query: 402 GFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRFAFEKFPGSEPLLTT 461
           G P+AK+A +L  G +L+ I  + TK+    F P    V   +    F++FPGS+ LL  
Sbjct: 883 GKPVAKLATQLMQGLTLEDI--NFTKE----FSPKFQAVKEAV--LPFKRFPGSDTLLGP 934

Query: 462 QMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDWEQLK 510
           +M+S GE M L + F  ++ K+  +   G    G + +   D D + L+
Sbjct: 935 EMRSTGEVMGLAKDFGIAYAKSELAAGNGVPSEGVAFLSTNDLDKKNLE 983


>gi|404496635|ref|YP_006720741.1| carbamyl-phosphate synthase, large subunit, glutamine-dependent
            [Geobacter metallireducens GS-15]
 gi|418066693|ref|ZP_12704052.1| carbamoyl-phosphate synthase, large subunit [Geobacter
            metallireducens RCH3]
 gi|78194238|gb|ABB32005.1| carbamyl-phosphate synthase, large subunit, glutamine-dependent
            [Geobacter metallireducens GS-15]
 gi|373560006|gb|EHP86282.1| carbamoyl-phosphate synthase, large subunit [Geobacter
            metallireducens RCH3]
          Length = 1081

 Score = 1333 bits (3451), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 665/1095 (60%), Positives = 828/1095 (75%), Gaps = 28/1095 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++KILI+GAGPIVIGQACEFDYSGTQACKALKEEG+EV+L+NSNPATIMTDP  AD
Sbjct: 3    KRTDIKKILIIGAGPIVIGQACEFDYSGTQACKALKEEGFEVVLLNSNPATIMTDPDFAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
            RTY+ P+TP+++ +++EKERPDA+LPT+GGQTALN AVA+AE+G LEK+GVELIGAKL A
Sbjct: 63   RTYVEPVTPDVLAKIIEKERPDAVLPTLGGQTALNTAVAVAENGTLEKFGVELIGAKLPA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            IKKAEDR LFK+AM+ IG+  P SG+ +   E + +   +G FP IIRP+FTLGGTGGGI
Sbjct: 123  IKKAEDRTLFKEAMEKIGLSVPRSGLAHNYTEAMEVIKTVG-FPAIIRPSFTLGGTGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN EE+E +   G+ AS T ++LVE+S++GWKEYELEVMRD ADNVVIICSIEN DPMG
Sbjct: 182  AYNMEEYEKMAMGGIDASPTDEILVEESVIGWKEYELEVMRDTADNVVIICSIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ LRD ++ IIREIGV+ GGSN+QF +NP +G ++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQILRDAALKIIREIGVDTGGSNIQFGINPRNGRLVVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRF 447
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD+I NDIT++TPA FEP+IDYVVTKIPRF
Sbjct: 302  PRVSRSSALASKATGFPIAKIAAKLAVGYTLDEIRNDITRETPACFEPTIDYVVTKIPRF 361

Query: 448  AFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGW------GCSNVKE 501
             FEKFP ++  LTTQMKSVGE MA+GRTF+ESFQKALRSLE G +G+           + 
Sbjct: 362  TFEKFPAADSTLTTQMKSVGEVMAIGRTFKESFQKALRSLEIGSAGFESRLFTNGDTRRA 421

Query: 502  LDWDWEQL-KYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQF 560
            L    +QL +  LRVPN +R+  +  A + GM +DEI + + ID WFL   K++I+ E+ 
Sbjct: 422  LSAKEQQLVQDKLRVPNWERLWYLGDAFRCGMSIDEIFQFTAIDPWFLHNIKQIIEKEED 481

Query: 561  LLTQSVSNMTKDDF----YEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDT 616
            L T  ++  T+++      E K+ GFSDK +       ++E+R+ RLSLGV P +KRVDT
Sbjct: 482  LRTVDLAAETRENLAAIVREAKQYGFSDKMLGRFWGKNDEEIRQLRLSLGVKPVFKRVDT 541

Query: 617  CAAEFEANTPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSA 676
            CAAEF A TPY+YS+Y+ ECE+  T +KK++ILGGGPNRIGQGIEFDYCC H  F+L   
Sbjct: 542  CAAEFVAYTPYLYSTYEEECEAEVTDRKKIMILGGGPNRIGQGIEFDYCCVHGVFALGED 601

Query: 677  GYETIMMNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSL 736
            GYETIM+N NPETVSTDYDTSDRLYFEPLT EDVL+++DLE+P+G+IVQFGGQTPLKLS+
Sbjct: 602  GYETIMVNCNPETVSTDYDTSDRLYFEPLTYEDVLSIVDLEKPQGVIVQFGGQTPLKLSV 661

Query: 737  PIHQYLDEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEA 796
             + +               V I GTSPD+ID AEDRERF  ++ +L++ QP+ G A+S  
Sbjct: 662  ALEK-------------AGVPIIGTSPDAIDRAEDRERFQEMLHKLNLLQPENGTARSFE 708

Query: 797  DALAIAKEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDA 856
            +A  +A  IGYPVVVRPSYVLGGRAMEIVY  E L  Y+  AV+  PE P+LIDK+L  A
Sbjct: 709  EAEEVANRIGYPVVVRPSYVLGGRAMEIVYDVENLRRYMTTAVQASPEHPILIDKFLDKA 768

Query: 857  IEIDVDALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAK 916
            IEIDVDAL D    VVIGGIMEHIE+AG+HSGDSAC +P  +IS   ++ I   T  +A 
Sbjct: 769  IEIDVDALCDGT-EVVIGGIMEHIEEAGIHSGDSACCLPPHSISPELVEEIRRQTTVMAL 827

Query: 917  RLNVCGLMNCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDL 976
             LNV GLMN QYAI   G +Y+LE NPRASRT PFVSKA G PLAK AA +M+GKSL +L
Sbjct: 828  ELNVKGLMNVQYAI-KDGTIYILEVNPRASRTAPFVSKATGRPLAKIAARIMAGKSLKEL 886

Query: 977  GFTKEVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQ 1036
            G   +++PKH+SVKEAV PF KF G D +LGPEM+STGEVMGI   F  AFAKAQ+ A  
Sbjct: 887  GVAGDIVPKHMSVKEAVFPFVKFPGVDTILGPEMKSTGEVMGIGSDFATAFAKAQLGANV 946

Query: 1037 KLPLSGTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEG 1096
            KLP SG VF+SL+D  K H+   AK   + GF++V+T GTA +L+ KG+ VE + K+ EG
Sbjct: 947  KLPRSGKVFISLHDADKKHIVDSAKKLYNAGFRLVATRGTAAYLKEKGVEVEVINKVLEG 1006

Query: 1097 RPHAGDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRS 1156
            RPH  D + +GQ+ M++ T+ G +    D   +RR  L + V   TTV+GA A AE I +
Sbjct: 1007 RPHIVDAIKSGQVCMVLNTTQG-AQAVADSFSIRRESLMHNVAYFTTVAGANAAAEGIIA 1065

Query: 1157 LKSNTVTMTALQDFF 1171
            + +  + +  LQ++ 
Sbjct: 1066 MINGELDVKPLQEYL 1080


>gi|254526071|ref|ZP_05138123.1| carbamoyl-phosphate synthase, large subunit [Prochlorococcus marinus
            str. MIT 9202]
 gi|221537495|gb|EEE39948.1| carbamoyl-phosphate synthase, large subunit [Prochlorococcus marinus
            str. MIT 9202]
          Length = 1098

 Score = 1333 bits (3450), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 659/1104 (59%), Positives = 840/1104 (76%), Gaps = 28/1104 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            +R DL KILILG+GPIVIGQACEFDYSGTQACKAL+  GYE+ILINSNPA+IMTDP +A+
Sbjct: 3    QRGDLNKILILGSGPIVIGQACEFDYSGTQACKALRNAGYEIILINSNPASIMTDPDIAN 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
            +TYI P+T E+V Q++ KE+PDA+LPTMGGQTALNLAV L+ES  L++  +ELIGA L A
Sbjct: 63   KTYIEPLTSEIVSQIILKEKPDAILPTMGGQTALNLAVKLSESDFLKQNNIELIGADLRA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR LFK++M+ I V   PSGI + LDE + ++ EI  +PLIIRPAFTLGG GGGI
Sbjct: 123  INKAEDRKLFKESMEKINVNVCPSGIASNLDEAMEVSKEISSYPLIIRPAFTLGGVGGGI 182

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            A+N EEF  +CK+GL  S ++Q+L+EKSL+GWKEYELEVMRD ADNVVI+CSIEN+DPMG
Sbjct: 183  AFNLEEFVELCKSGLEESPSNQILIEKSLIGWKEYELEVMRDTADNVVIVCSIENLDPMG 242

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQRLRD S+ IIRE+GVE GGSN+QFA+NP +G+V+VIEMN
Sbjct: 243  VHTGDSITVAPAQTLTDKEYQRLRDLSLKIIREVGVETGGSNIQFAINPTNGDVIVIEMN 302

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRF 447
            PRVSRSSALASKATGFPIAK+AA LSVGY+LD+I NDITKKTPA FEPSIDYVVTKIPRF
Sbjct: 303  PRVSRSSALASKATGFPIAKIAALLSVGYTLDEIINDITKKTPACFEPSIDYVVTKIPRF 362

Query: 448  AFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDWE 507
            AFEKF G+   L+T MKSVGE+MA+GR+F+ESFQKALRSLE G  GW C ++ E   +  
Sbjct: 363  AFEKFKGTSKTLSTAMKSVGESMAIGRSFEESFQKALRSLEVGVFGWECDSLDEFK-NES 421

Query: 508  QLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQ-FLLTQSV 566
             +K SLR P  +R+  +  AM+ G     I+E++ ID WF+ + + + + E  FL  + +
Sbjct: 422  HIKNSLRNPTCERIFLVKKAMQLGKTNSYIYEVTNIDLWFIEKLRNIFNFENDFLKEKEL 481

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
             ++ +D     K+ GFSD+QIA  T S   EVR  R  L +IP YK VDTC+AEF ++TP
Sbjct: 482  YSLDRDLMLHAKQLGFSDQQIAKLTNSEFFEVRRYRKKLNIIPIYKTVDTCSAEFSSSTP 541

Query: 627  YMYSSYD----------FECE-SAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQS 675
            Y YS+Y+          F+ E S     KK++ILGGGPNRIGQGIEFDYCCCH S+   +
Sbjct: 542  YHYSTYEESFLNSNSQIFDSEISENCASKKIMILGGGPNRIGQGIEFDYCCCHASYQAST 601

Query: 676  AGYETIMMNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLS 735
             GY+TIM+NSNPETVSTDYDTSD LYFEP+T+EDVLN+I+ E P G+IVQFGGQTPLK+S
Sbjct: 602  NGYKTIMVNSNPETVSTDYDTSDILYFEPVTLEDVLNIIEAENPYGLIVQFGGQTPLKIS 661

Query: 736  LPIHQYLDEHRLPSASGDGL---VRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIA 792
            LP++++L        S DG     +I GTSP SID AEDRE F  I++ELSI QP  GIA
Sbjct: 662  LPLYEWL-------KSNDGAKTGSKILGTSPISIDLAEDREEFTKILEELSIRQPLNGIA 714

Query: 793  KSEADALAIAKEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKY 852
            +++ +A  +AK IG+P+VVRPSYVLGGRAMEIV  +  L  Y+  AV+V P+ P+L+D+Y
Sbjct: 715  RNQDEAEIVAKNIGFPLVVRPSYVLGGRAMEIVKDENELSRYITEAVKVSPDHPILLDQY 774

Query: 853  LSDAIEIDVDALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTI 912
            L++AIEIDVDAL DS G+VVI G+MEH+E AG+HSGDSAC +P+ ++S S ++ +  WT 
Sbjct: 775  LNNAIEIDVDALCDSKGSVVIAGLMEHVEPAGIHSGDSACCLPSISLSLSTIENVRKWTK 834

Query: 913  KLAKRLNVCGLMNCQYAITTSGD----VYLLEANPRASRTVPFVSKAIGHPLAKYAALVM 968
             +A+RLNV GL+N Q+A+T + +    +++LEANPRASRTVPFVSKAIG P+AK A  +M
Sbjct: 835  LIAQRLNVVGLINLQFAVTNTNNKENKLFILEANPRASRTVPFVSKAIGKPIAKLATQLM 894

Query: 969  SGKSLNDLGFTKEVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFA 1028
             G +L D+ FT+E+ PK+ +VKEAVLPF++F G D LLGPEMRSTGEVMG+   F IA+A
Sbjct: 895  QGFTLEDINFTQEISPKYQAVKEAVLPFKRFPGSDTLLGPEMRSTGEVMGLAKDFGIAYA 954

Query: 1029 KAQIAAGQKLPLSGTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVE 1088
            K+++AAG  +P  G  FLS NDL K +L+ IA+  L +GFK+++T GTA +L   GI V+
Sbjct: 955  KSELAAGNGVPSEGVAFLSTNDLDKKNLKEIAQELLILGFKLIATKGTASYLVNLGIQVD 1014

Query: 1089 RVLKMHEGRPHAGDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGAL 1148
             VLK+HEGRP+  D++ +G +Q+++ T  G      D   LRR  L Y +P  TT+ GA 
Sbjct: 1015 EVLKVHEGRPNIEDLIRSGLVQLIINTPIGSQALHDDAY-LRRAALEYNIPTFTTIPGAK 1073

Query: 1149 ANAEAIRSLKSNTVTMTALQDFFD 1172
            A  +AI++L+SN V   +LQ+  +
Sbjct: 1074 AAIKAIKALQSNRVDAYSLQEIHN 1097



 Score =  231 bits (589), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 154/469 (32%), Positives = 243/469 (51%), Gaps = 30/469 (6%)

Query: 48  SWPPQLTRYSRSRVRASSAKIDSSAELSNGAASSKDQKLGKRTDLRKILILGAGPIVIGQ 107
           S P   + Y  S + ++S   DS  E+S   AS            +KI+ILG GP  IGQ
Sbjct: 539 STPYHYSTYEESFLNSNSQIFDS--EISENCAS------------KKIMILGGGPNRIGQ 584

Query: 108 ACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLADRTYITPMTPELVEQVLEKER 167
             EFDY    A       GY+ I++NSNP T+ TD   +D  Y  P+T E V  ++E E 
Sbjct: 585 GIEFDYCCCHASYQASTNGYKTIMVNSNPETVSTDYDTSDILYFEPVTLEDVLNIIEAEN 644

Query: 168 PDALLPTMGGQTALNLAVALAE---SGALEKYGVELIGAKLDAIKKAEDRDLFKQAMKTI 224
           P  L+   GGQT L +++ L E   S    K G +++G    +I  AEDR+ F + ++ +
Sbjct: 645 PYGLIVQFGGQTPLKISLPLYEWLKSNDGAKTGSKILGTSPISIDLAEDREEFTKILEEL 704

Query: 225 GVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGIAYNKEEFEAICKAGLAA 284
            ++ P +GI    DE   +A  IG FPL++RP++ LGG    I  ++ E        +  
Sbjct: 705 SIRQPLNGIARNQDEAEIVAKNIG-FPLVVRPSYVLGGRAMEIVKDENELSRYITEAVKV 763

Query: 285 SLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMGVHTGDSITVAPAQTLTD 344
           S    +L+++ L    E +++ + D   +VVI   +E+V+P G+H+GDS    P+ +L+ 
Sbjct: 764 SPDHPILLDQYLNNAIEIDVDALCDSKGSVVIAGLMEHVEPAGIHSGDSACCLPSISLSL 823

Query: 345 KEYQRLRDYSIAIIREIGVECGGSNVQFAV---NPVDGEVMVIEMNPRVSRSSALASKAT 401
              + +R ++  I + + V  G  N+QFAV   N  + ++ ++E NPR SR+    SKA 
Sbjct: 824 STIENVRKWTKLIAQRLNV-VGLINLQFAVTNTNNKENKLFILEANPRASRTVPFVSKAI 882

Query: 402 GFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRFAFEKFPGSEPLLTT 461
           G PIAK+A +L  G++L+ I  + T+      E S  Y   K     F++FPGS+ LL  
Sbjct: 883 GKPIAKLATQLMQGFTLEDI--NFTQ------EISPKYQAVKEAVLPFKRFPGSDTLLGP 934

Query: 462 QMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDWEQLK 510
           +M+S GE M L + F  ++ K+  +   G    G + +   D D + LK
Sbjct: 935 EMRSTGEVMGLAKDFGIAYAKSELAAGNGVPSEGVAFLSTNDLDKKNLK 983


>gi|39996378|ref|NP_952329.1| carbamyl-phosphate synthase, large subunit lipoprotein,
            glutamine-dependent [Geobacter sulfurreducens PCA]
 gi|409911813|ref|YP_006890278.1| carbamyl-phosphate synthase, large subunit, glutamine-dependent
            [Geobacter sulfurreducens KN400]
 gi|39983258|gb|AAR34652.1| carbamyl-phosphate synthase, large subunit lipoprotein,
            glutamine-dependent [Geobacter sulfurreducens PCA]
 gi|298505388|gb|ADI84111.1| carbamyl-phosphate synthase, large subunit, glutamine-dependent
            [Geobacter sulfurreducens KN400]
          Length = 1081

 Score = 1333 bits (3449), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 665/1095 (60%), Positives = 830/1095 (75%), Gaps = 28/1095 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++KILI+GAGPIVIGQACEFDYSGTQACKALKEEG+EV+L+NSNPATIMTDP  AD
Sbjct: 3    KRTDIKKILIIGAGPIVIGQACEFDYSGTQACKALKEEGFEVVLLNSNPATIMTDPDFAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
            RTY+ P+TPE++ +++EKERPDA+LPT+GGQTALN AVA+AE+G LEK+GVELIGAKL A
Sbjct: 63   RTYVEPVTPEVLAKIIEKERPDAVLPTLGGQTALNTAVAVAENGTLEKFGVELIGAKLPA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            IKKAEDR LFK+AM+ IG+  P SG+ +   E +++   +G FP IIRP+FTLGGTGGGI
Sbjct: 123  IKKAEDRTLFKEAMEKIGLSVPRSGLAHNYSEAMTVVKTVG-FPAIIRPSFTLGGTGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN EE+E +  AG+ AS T ++LVE+S++GWKEYELEVMRD ADNVVIICSIEN DPMG
Sbjct: 182  AYNMEEYEKMAMAGIDASPTDEILVEESVIGWKEYELEVMRDTADNVVIICSIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ LRD ++ IIREIGV+ GGSN+QF +NP +G ++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQILRDAALKIIREIGVDTGGSNIQFGINPRNGRLVVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRF 447
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD+I NDIT++TPA FEP+IDYVVTKIPRF
Sbjct: 302  PRVSRSSALASKATGFPIAKIAAKLAVGYTLDEIRNDITRETPACFEPTIDYVVTKIPRF 361

Query: 448  AFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDW--- 504
             FEKFP ++  LTTQMKSVGE MA+GRTF+ESFQKALRSLE G +G+        D    
Sbjct: 362  TFEKFPAADATLTTQMKSVGEVMAIGRTFKESFQKALRSLEIGSAGFESRIFTNGDTRRA 421

Query: 505  ----DWEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQF 560
                + +QL+  LRVPN +R+  +  A + GM ++E+ +L+ ID WFL   K++I+ E+ 
Sbjct: 422  LAPNEQQQLQDKLRVPNWERLWYLGDAFRCGMSIEEVFQLTAIDPWFLHNIKQIIEKEEE 481

Query: 561  LLTQSVSNMTKDDF----YEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDT 616
            L    V+    DD      E K+ GFSD+ +      +++E+R+ RLSLG+ P +KRVDT
Sbjct: 482  LRKVDVTAAAPDDLRAIVREAKQYGFSDRMLGRFWGKSDEEIRQLRLSLGIKPVFKRVDT 541

Query: 617  CAAEFEANTPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSA 676
            CAAEF A TPY+YS+Y+ ECE+  T +KK++ILGGGPNRIGQGIEFDYCC H  F+L   
Sbjct: 542  CAAEFVAYTPYLYSTYEDECEAEVTDRKKIMILGGGPNRIGQGIEFDYCCVHGVFALAED 601

Query: 677  GYETIMMNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSL 736
            GYETIM+N NPETVSTDYDTSDRLYFEPLT EDVL++++LE+PEG+IVQFGGQTPLKL++
Sbjct: 602  GYETIMVNCNPETVSTDYDTSDRLYFEPLTYEDVLSIVELEKPEGVIVQFGGQTPLKLAV 661

Query: 737  PIHQYLDEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEA 796
             + +               V I GTSPD+ID AEDRERF  ++ +L++ QP+ G A+S  
Sbjct: 662  ALEK-------------AGVPIIGTSPDAIDRAEDRERFQEMLHKLNLLQPENGTARSFE 708

Query: 797  DALAIAKEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDA 856
            +A  +A  IGYPVVVRPSYVLGGRAMEIVY  E L  Y+  AV+  PE P+LIDK+L  A
Sbjct: 709  EAEEVANRIGYPVVVRPSYVLGGRAMEIVYDVENLRRYMTTAVQASPEHPILIDKFLDKA 768

Query: 857  IEIDVDALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAK 916
            IEIDVDAL D   +VVIGGIMEHIE+AG+HSGDSAC +P  +IS + ++ I   T  +A 
Sbjct: 769  IEIDVDALCDGT-DVVIGGIMEHIEEAGIHSGDSACCLPPHSISQALVEEIRRQTTVMAL 827

Query: 917  RLNVCGLMNCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDL 976
             LNV GLMN QYAI   G +Y+LE NPRASRT PFVSKA G PLAK AA VM+G+SL DL
Sbjct: 828  ELNVKGLMNVQYAI-KDGTIYILEVNPRASRTAPFVSKATGRPLAKIAARVMAGRSLKDL 886

Query: 977  GFTKEVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQ 1036
            G + +++PKH+SVKEAV PF KF G D LLGPEM+STGEVMGI   F  AFAKAQ+ A  
Sbjct: 887  GVSGDIVPKHMSVKEAVFPFVKFPGVDTLLGPEMKSTGEVMGIGPDFATAFAKAQLGANV 946

Query: 1037 KLPLSGTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEG 1096
            +LP SG VF+SL+D  K H+   AK   + GF++V+T GTA +L+ KG+ VE + K+ EG
Sbjct: 947  RLPRSGKVFISLHDADKKHIVESAKKLYNAGFRLVATRGTAAYLKEKGVEVEVINKVLEG 1006

Query: 1097 RPHAGDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRS 1156
            RPH  D + NG+I M++ T+ G +    D   +RR  L + V   TTV+GA A A  I +
Sbjct: 1007 RPHVVDAIKNGEICMVLNTTQG-AQAVADSFSIRREALMHNVAYFTTVAGANAAAGGIVA 1065

Query: 1157 LKSNTVTMTALQDFF 1171
            +    + +  LQ++ 
Sbjct: 1066 MLEGELDVKPLQEYL 1080



 Score =  254 bits (650), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 150/407 (36%), Positives = 230/407 (56%), Gaps = 23/407 (5%)

Query: 79  ASSKDQKLGKRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPAT 138
           ++ +D+   + TD +KI+ILG GP  IGQ  EFDY       AL E+GYE I++N NP T
Sbjct: 555 STYEDECEAEVTDRKKIMILGGGPNRIGQGIEFDYCCVHGVFALAEDGYETIMVNCNPET 614

Query: 139 IMTDPGLADRTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGV 198
           + TD   +DR Y  P+T E V  ++E E+P+ ++   GGQT L LAV      ALEK GV
Sbjct: 615 VSTDYDTSDRLYFEPLTYEDVLSIVELEKPEGVIVQFGGQTPLKLAV------ALEKAGV 668

Query: 199 ELIGAKLDAIKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAF 258
            +IG   DAI +AEDR+ F++ +  + +  P +G   + +E   +AN IG +P+++RP++
Sbjct: 669 PIIGTSPDAIDRAEDRERFQEMLHKLNLLQPENGTARSFEEAEEVANRIG-YPVVVRPSY 727

Query: 259 TLGGTGGGIAYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIIC 318
            LGG    I Y+ E         + AS    +L++K L    E +++ + D  D VVI  
Sbjct: 728 VLGGRAMEIVYDVENLRRYMTTAVQASPEHPILIDKFLDKAIEIDVDALCDGTD-VVIGG 786

Query: 319 SIENVDPMGVHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVD 378
            +E+++  G+H+GDS    P  +++    + +R  +  +  E+ V+ G  NVQ+A+   D
Sbjct: 787 IMEHIEEAGIHSGDSACCLPPHSISQALVEEIRRQTTVMALELNVK-GLMNVQYAIK--D 843

Query: 379 GEVMVIEMNPRVSRSSALASKATGFPIAKMAAKLSVGYSLDQ--IPNDITKKTPASFEPS 436
           G + ++E+NPR SR++   SKATG P+AK+AA++  G SL    +  DI  K        
Sbjct: 844 GTIYILEVNPRASRTAPFVSKATGRPLAKIAARVMAGRSLKDLGVSGDIVPK-------- 895

Query: 437 IDYVVTKIPRFAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKA 483
             ++  K   F F KFPG + LL  +MKS GE M +G  F  +F KA
Sbjct: 896 --HMSVKEAVFPFVKFPGVDTLLGPEMKSTGEVMGIGPDFATAFAKA 940


>gi|222056353|ref|YP_002538715.1| carbamoyl-phosphate synthase large subunit [Geobacter daltonii
            FRC-32]
 gi|221565642|gb|ACM21614.1| carbamoyl-phosphate synthase, large subunit [Geobacter daltonii
            FRC-32]
          Length = 1080

 Score = 1332 bits (3446), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 667/1095 (60%), Positives = 817/1095 (74%), Gaps = 27/1095 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++KILI+GAGPIVIGQACEFDYSGTQACKALKEEG+EV+L+NSNPATIMTDP  AD
Sbjct: 3    KRTDIKKILIIGAGPIVIGQACEFDYSGTQACKALKEEGFEVVLLNSNPATIMTDPDFAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
            RTYI P+TPE++ +++EKERPDA+LPT+GGQTALN AVA+AE+G L+K+GVELIGAKL A
Sbjct: 63   RTYIEPVTPEILAKIIEKERPDAVLPTLGGQTALNTAVAVAENGVLDKFGVELIGAKLPA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            IKKAEDR LFKQAM+ IG+  P SG+ +   E + I  EIG FP IIRP+FTLGGTGGGI
Sbjct: 123  IKKAEDRTLFKQAMEKIGLAVPRSGLAHNNAEAMEIIREIG-FPAIIRPSFTLGGTGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN EE+E +   G+ AS T ++LVE+S++GWKEYELEVMRD ADNVVIICSIEN DPMG
Sbjct: 182  AYNMEEYEKMSATGIDASPTDEILVEESVIGWKEYELEVMRDTADNVVIICSIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ LRD S+ IIREIGV+ GGSN+QF +NP +G ++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQILRDASLKIIREIGVDTGGSNIQFGINPKNGRLVVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRF 447
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD+I NDIT++TPA FEP+IDYVVTK+PRF
Sbjct: 302  PRVSRSSALASKATGFPIAKIAAKLAVGYTLDEITNDITRETPACFEPTIDYVVTKVPRF 361

Query: 448  AFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLE---CGFSGWGCSNVKELDW 504
             FEKFP ++  LTTQMKSVGE MA+GRTF+ES QKALRSLE   CGF         E   
Sbjct: 362  TFEKFPAADSTLTTQMKSVGEVMAIGRTFKESLQKALRSLEIGSCGFESRLFEQTAETRR 421

Query: 505  -----DWEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQ 559
                 + + L   LR PN +R+  +  A + GM V+EI   +  D WFL   +++I+ E 
Sbjct: 422  ALTGKEQQLLMEKLRTPNWERLWYLGDAFRSGMTVEEIFAATAFDPWFLHNIRQIIEKED 481

Query: 560  FLLTQSVSNMT--KDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTC 617
             L    +      KD   E K+ GF+DK +      +E EVR  RLSLG+ P +KRVDTC
Sbjct: 482  ELKKVDLGKAADLKDILLEAKQYGFADKFLGKLWGKSEDEVRSLRLSLGIKPVFKRVDTC 541

Query: 618  AAEFEANTPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAG 677
            AAEF A TPY+YS+Y+ ECE+  T +KK++ILGGGPNRIGQGIEFDYCC H  F+L  AG
Sbjct: 542  AAEFVAYTPYLYSTYEEECEAEVTDRKKIMILGGGPNRIGQGIEFDYCCVHGVFALADAG 601

Query: 678  YETIMMNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLP 737
            YETIM+N NPETVSTDYDTSDRLYFEPLT EDVLN++ LE+P G+IVQFGGQTPLKL++ 
Sbjct: 602  YETIMVNCNPETVSTDYDTSDRLYFEPLTYEDVLNIVQLEKPVGVIVQFGGQTPLKLAVA 661

Query: 738  IHQYLDEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEAD 797
            + +               V I GTSPD+ID AEDRERF  ++ +L + QP+ G A+S  +
Sbjct: 662  LEK-------------AGVPIIGTSPDAIDRAEDRERFQEMLHKLGLRQPENGTARSFEE 708

Query: 798  ALAIAKEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAI 857
            A  +A  IGYPVVVRPSYVLGGRAMEIVY  + L  Y+  AV+  PE P+LIDK+L +AI
Sbjct: 709  AEKVADRIGYPVVVRPSYVLGGRAMEIVYDVDNLRRYMTTAVQASPEHPILIDKFLDEAI 768

Query: 858  EIDVDALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKR 917
            EIDVDAL D     VIGGIMEHIE+AG+HSGDSAC +P  +IS +  D I   T  +A  
Sbjct: 769  EIDVDALCDGT-EAVIGGIMEHIEEAGIHSGDSACSLPPYSISRAITDEIRRQTKLMALE 827

Query: 918  LNVCGLMNCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLG 977
            LNV GLMN QYAI   G +Y+LE NPRASRT PFVSKA G PLAK AAL+MSGK+L +LG
Sbjct: 828  LNVRGLMNVQYAI-KGGVIYILEVNPRASRTAPFVSKATGRPLAKLAALIMSGKTLKELG 886

Query: 978  FTKEVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQK 1037
             T+E++P H+SVKEAV PF KF G D +LGPEM+STGEVMGID +F +AFAKAQ+ AG K
Sbjct: 887  ITEEIVPTHISVKEAVFPFVKFPGVDTILGPEMKSTGEVMGIDDNFAMAFAKAQLGAGVK 946

Query: 1038 LPLSGTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGR 1097
            LP+SG VF+S+ D  K H+   AK   D GF++V+T GTA +L+ KGI V+ V K+ EGR
Sbjct: 947  LPMSGKVFISVRDADKKHIVTAAKKLYDNGFELVATRGTAAYLQEKGITVQVVNKVLEGR 1006

Query: 1098 PHAGDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSL 1157
            PH  D + N +I M++ T+ G +    D   +RR  L   +   TT SGA A  + I ++
Sbjct: 1007 PHIVDSIKNNEICMVINTTQG-AQAVADSFSIRRSTLLNNIAYYTTASGAKAVVDGIIAM 1065

Query: 1158 KSNTVTMTALQDFFD 1172
            +   + +  +QD+ +
Sbjct: 1066 RQEELAVKPIQDYLN 1080


>gi|189425138|ref|YP_001952315.1| carbamoyl-phosphate synthase large subunit [Geobacter lovleyi SZ]
 gi|189421397|gb|ACD95795.1| carbamoyl-phosphate synthase, large subunit [Geobacter lovleyi SZ]
          Length = 1082

 Score = 1330 bits (3442), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 662/1092 (60%), Positives = 816/1092 (74%), Gaps = 25/1092 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++KILI+GAGPIVIGQACEFDYSGTQACKALKEEGYEV+L+NSNPATIMTDP  AD
Sbjct: 3    KRTDIKKILIIGAGPIVIGQACEFDYSGTQACKALKEEGYEVVLLNSNPATIMTDPDFAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
            RTY+ P+TPE++ +++EKERPDA+LPT+GGQTALN AV++AE G L+K+GVELIGAKL A
Sbjct: 63   RTYVEPVTPEILAKIIEKERPDAVLPTLGGQTALNTAVSVAEMGILDKFGVELIGAKLPA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            IKKAEDR LFKQAM+ IG+  P SG+ +   E + +  ++G FP IIRP+FTLGGTGGGI
Sbjct: 123  IKKAEDRTLFKQAMEKIGLSVPKSGLAHNRTEVMEVIKQVG-FPAIIRPSFTLGGTGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN EE+E +   G+ AS T ++LVE+S++GWKEYELEVMRD ADNVVIICSIEN DPMG
Sbjct: 182  AYNMEEYERMAMVGIDASPTDEILVEESVIGWKEYELEVMRDTADNVVIICSIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ LRD S+ IIREIGV+ GGSN+QF +NP DG ++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQILRDASLKIIREIGVDTGGSNIQFGINPRDGRLVVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRF 447
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD+I NDIT++TPA FEP+IDYVVTKIPRF
Sbjct: 302  PRVSRSSALASKATGFPIAKIAAKLAVGYTLDEIRNDITRETPACFEPTIDYVVTKIPRF 361

Query: 448  AFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGW-------GCSNVK 500
             FEKFP ++  LTTQMKSVGE MA+GRTF+ESFQKALRSLE G  G+       G    +
Sbjct: 362  TFEKFPAADATLTTQMKSVGEVMAIGRTFKESFQKALRSLEIGVCGFDSKLFDLGSETRR 421

Query: 501  EL-DWDWEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQ 559
             L D + + L   L VPN DR+  +  A++ GM VDE+++ +  D WF+   +++I+ E+
Sbjct: 422  SLTDHEQQLLLEKLSVPNADRLWYLGDALRSGMTVDEVYKHTAFDPWFVNNMRQIIEKEE 481

Query: 560  FLLTQSVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAA 619
             L     + +T+D  YE K+ GFSDK +A   K +E +VRE R SL V P YKRVDTCAA
Sbjct: 482  ELKGLHPTAVTRDQLYEAKQYGFSDKMLAKLWKVSEDQVRELRWSLKVRPVYKRVDTCAA 541

Query: 620  EFEANTPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYE 679
            EF A TPY+YS+Y+ ECE+  T +KK++ILGGGPNRIGQGIEFDYCC H  F+L   GYE
Sbjct: 542  EFVAYTPYLYSTYEEECEAEVTDRKKIIILGGGPNRIGQGIEFDYCCVHGVFALAEDGYE 601

Query: 680  TIMMNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIH 739
            TIM+N NPETVSTDYDTSDRLYFEPLT EDVL ++  E P G+IVQFGGQTPLKLS+ + 
Sbjct: 602  TIMVNCNPETVSTDYDTSDRLYFEPLTQEDVLEIVAKENPVGVIVQFGGQTPLKLSVALE 661

Query: 740  QYLDEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADAL 799
            +               V I GTSPD+ID AEDRERF  ++ +L + QP  G A+S  +A 
Sbjct: 662  K-------------AGVPIIGTSPDAIDRAEDRERFQEMLHKLDLLQPANGTARSFEEAE 708

Query: 800  AIAKEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEI 859
             +A  IGYPVVVRPSYVLGGRAMEIVY  E L  Y+  AV+  PE P+L+DK+L  AIEI
Sbjct: 709  EVANRIGYPVVVRPSYVLGGRAMEIVYDVENLRRYMTTAVQASPEHPILVDKFLDAAIEI 768

Query: 860  DVDALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLN 919
            DVDAL D    VVIGGIMEHIE+AG+HSGDSAC +P  ++S   +  +   T  +A  LN
Sbjct: 769  DVDALCDG-KQVVIGGIMEHIEEAGIHSGDSACSLPPYSLSQELIAEVRRQTEIMALELN 827

Query: 920  VCGLMNCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFT 979
            V GLMN QYA+   G +Y+LE NPRASRT PFVSKA G PLAK AA +M+GK+L +LG +
Sbjct: 828  VIGLMNVQYAV-KDGTIYILEVNPRASRTAPFVSKATGRPLAKIAARIMAGKTLAELGVS 886

Query: 980  KEVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLP 1039
             +++P + SVKEAV PF KF G D +LGPEM+STGEVMGI  SF  AFAK+Q+ A  K+P
Sbjct: 887  GDIVPDYFSVKEAVFPFVKFPGVDTILGPEMKSTGEVMGIGDSFAEAFAKSQLGANVKMP 946

Query: 1040 LSGTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPH 1099
            LSG  F+S+ D  K H+   A+     GF I++T GTA FLE KGI V R+ K+ EGRPH
Sbjct: 947  LSGNAFISVRDGDKKHVVTAAEKLYKAGFGILATGGTASFLEEKGIPVRRINKVMEGRPH 1006

Query: 1100 AGDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKS 1159
              D + NG++Q+++ T+ G +    D   +RR  L + V   TT +GA A  +AI +LK 
Sbjct: 1007 IVDALKNGEVQLVINTTQG-AQAVADSFSIRREALMHSVAYYTTATGANAAVDAIIALKG 1065

Query: 1160 NTVTMTALQDFF 1171
              + +  LQD+ 
Sbjct: 1066 QELRVKPLQDYL 1077


>gi|197118283|ref|YP_002138710.1| carbamoyl-phosphate synthase large subunit lipoprotein [Geobacter
            bemidjiensis Bem]
 gi|197087643|gb|ACH38914.1| carbamyl-phosphate synthase, large subunit, glutamine-dependent
            [Geobacter bemidjiensis Bem]
          Length = 1082

 Score = 1330 bits (3441), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 668/1097 (60%), Positives = 826/1097 (75%), Gaps = 31/1097 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++KILI+GAGPIVIGQACEFDYSGTQACKALKEEG+EV+L+NSNPATIMTDP  AD
Sbjct: 3    KRTDIKKILIIGAGPIVIGQACEFDYSGTQACKALKEEGFEVVLLNSNPATIMTDPDFAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+TPE++  ++EKERPDALLPT+GGQTALN AVA+AE+G LEK+GVELIGAKL A
Sbjct: 63   FTYIEPVTPEILAAIIEKERPDALLPTLGGQTALNTAVAVAENGTLEKFGVELIGAKLPA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            IKKAEDR LFK+AM  IG+  P SG+ +   E + +   +G FP IIRP+FTLGGTGGGI
Sbjct: 123  IKKAEDRTLFKEAMVRIGLDVPRSGLAHNYQEAMEVIKFVG-FPAIIRPSFTLGGTGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN EE+E +  AG+ AS T ++LVE+SL+GWKEYELEVMRD ADNVVIICSIEN D MG
Sbjct: 182  AYNMEEYERMSMAGIEASPTDEILVEESLIGWKEYELEVMRDTADNVVIICSIENFDAMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ LRD S+ IIREIGV+ GGSN+QF  NP +G ++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQILRDASLKIIREIGVDTGGSNIQFGTNPKNGRLIVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRF 447
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD+I NDITK+TPA FEP+IDYVVTKIPRF
Sbjct: 302  PRVSRSSALASKATGFPIAKIAAKLAVGYTLDEITNDITKETPACFEPTIDYVVTKIPRF 361

Query: 448  AFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLE---CGFS----GWGCSNVK 500
             FEKFP ++  LTTQMKSVGE M++GRTF+ESFQKALRSLE   CGF     G G    +
Sbjct: 362  TFEKFPAADATLTTQMKSVGEVMSIGRTFKESFQKALRSLEIGSCGFESKFFGVGGDTRR 421

Query: 501  EL-DWDWEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQ 559
             L + +   L   LR PN DR+  +  A + GM V+EI+ L+ ID WFL   +++I++E+
Sbjct: 422  ALTEKERNLLNDKLRTPNCDRLWYVGDAFRCGMSVEEIYALTAIDPWFLNNIRQIIEMEE 481

Query: 560  FLLTQSVSNMT----KDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVD 615
             L   ++ N +     D  ++ KR GFSDK ++   K TE EVR+ RLS+GV P +KRVD
Sbjct: 482  ELKQINIKNESGEKLHDILWDAKRYGFSDKFLSQLWKITEAEVRQLRLSVGVKPVFKRVD 541

Query: 616  TCAAEFEANTPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQS 675
            TCAAEF A+TPY+YS+Y+ ECE+ PT KKK++ILGGGPNRIGQGIEFDYCC H  F+L  
Sbjct: 542  TCAAEFVAHTPYLYSTYEEECEAEPTDKKKIIILGGGPNRIGQGIEFDYCCVHGVFALSE 601

Query: 676  AGYETIMMNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLS 735
             GYETIM+N NPETVSTDYDTSDRLYFEPLT EDVLN++D+E+P G+IVQFGGQTPLKL+
Sbjct: 602  DGYETIMVNCNPETVSTDYDTSDRLYFEPLTFEDVLNIVDVEKPTGVIVQFGGQTPLKLA 661

Query: 736  LPIHQYLDEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSE 795
            + + +               V I GTSPD+ID AEDRERF  ++++L + QP+ G A+S 
Sbjct: 662  VALEK-------------AGVPIIGTSPDAIDRAEDRERFQEMLQKLKLRQPENGTARSF 708

Query: 796  ADALAIAKEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSD 855
             ++  +A+ IGYPVVVRPSYVLGGRAMEIVY  + L  Y+  AV+  PE P+LIDK+L +
Sbjct: 709  EESEVVAERIGYPVVVRPSYVLGGRAMEIVYDVDNLRRYMHTAVQASPEHPILIDKFLDE 768

Query: 856  AIEIDVDALADSCGNV-VIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKL 914
            AIEIDVDAL D  G V VIGGIMEHIE+AG+HSGDSAC +P  +IS   ++ I   T  +
Sbjct: 769  AIEIDVDALCD--GQVAVIGGIMEHIEEAGIHSGDSACSLPPYSISKEIVEEIRRQTKMM 826

Query: 915  AKRLNVCGLMNCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLN 974
            A  LNV GLMN Q+A+    D+Y++E NPRASRT PFVSKA G PLAK AA VM+GK+L 
Sbjct: 827  ALELNVKGLMNVQFAV-KGNDIYIIEVNPRASRTSPFVSKATGRPLAKIAARVMAGKTLA 885

Query: 975  DLGFTKEVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAA 1034
            +LG T E++P H+SVKE+V PF KF G D +LGPEM+STGEVMGI  +F  A+AKAQ+ A
Sbjct: 886  ELGVTDEIVPVHISVKESVFPFAKFPGVDTILGPEMKSTGEVMGIGDTFAKAYAKAQMGA 945

Query: 1035 GQKLPLSGTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMH 1094
              KLP SG VF+S+ D  K H+   AK   D GF++V+T GTA +L+ KGI V+ V K+ 
Sbjct: 946  NVKLPTSGKVFISVKDTDKKHIVSAAKRLYDQGFELVATRGTASYLQEKGIPVQVVNKVI 1005

Query: 1095 EGRPHAGDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAI 1154
            EGRPH  D + N +I M++ T+ G +    D   +RR  L   V   TT SGA A  + I
Sbjct: 1006 EGRPHIVDAIKNNEICMVINTTHG-AQAVADSYSIRRNTLINNVAYYTTASGARAAVDGI 1064

Query: 1155 RSLKSNTVTMTALQDFF 1171
             ++  + + + ++Q + 
Sbjct: 1065 IAMSKSKLEVNSIQHYL 1081


>gi|288930712|ref|YP_003434772.1| carbamoyl-phosphate synthase, large subunit [Ferroglobus placidus DSM
            10642]
 gi|288892960|gb|ADC64497.1| carbamoyl-phosphate synthase, large subunit [Ferroglobus placidus DSM
            10642]
          Length = 1081

 Score = 1328 bits (3438), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 651/1089 (59%), Positives = 837/1089 (76%), Gaps = 22/1089 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KR D++KI+++G+GPIVIGQA EFDYSG+QACKAL+EEGYEV+L+NSNPATIMTDP +AD
Sbjct: 3    KREDIKKIMVIGSGPIVIGQAAEFDYSGSQACKALREEGYEVVLVNSNPATIMTDPEMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
            +TYI P+TPE+V +++E+E PDALLPT+GGQTALN+AV L E G L+KYGVELIGA +DA
Sbjct: 63   KTYIEPLTPEVVAKIIERETPDALLPTLGGQTALNIAVKLHEMGVLDKYGVELIGANVDA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            IKKAEDRDLFK+AM+ IG++ P S I  ++ + ++IA E+G +P+++RPAFTLGGTGGGI
Sbjct: 123  IKKAEDRDLFKKAMENIGLEVPRSEIAESVSDALTIAEELG-YPVVVRPAFTLGGTGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EE + I + GL  S+  QVL+E+S++GWKE+ELEVMRD ADNVVIICSIEN DPMG
Sbjct: 182  AYNREELKEIVRKGLELSMIHQVLIEESVIGWKEFELEVMRDKADNVVIICSIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTD EYQRLRD +IAIIREIGVE GGSN+QFAV+P     + IEMN
Sbjct: 242  VHTGDSITVAPAQTLTDYEYQRLRDAAIAIIREIGVETGGSNIQFAVHPSSDRFLAIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRF 447
            PRVSRSSALASKATG+PIAK+AAKL+VGY+LD+IPNDITK+TPASFEP+IDYVV KIPRF
Sbjct: 302  PRVSRSSALASKATGYPIAKIAAKLAVGYTLDEIPNDITKETPASFEPTIDYVVVKIPRF 361

Query: 448  AFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDWE 507
            AF+KFP ++P L TQMKSVGE MA+GRTF+E+ QKALRSLE G  G G    K+     +
Sbjct: 362  AFDKFPTADPTLGTQMKSVGEVMAIGRTFEEALQKALRSLEIGRYGLGADG-KDKQPSKD 420

Query: 508  QLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLL----T 563
            ++   L  PNP+R+  I  A+  G  VDE+ EL+ IDKWF+++ K ++DVE+ L      
Sbjct: 421  EIVKKLITPNPERVFYIRYALLNGFSVDEVAELTKIDKWFISKIKNILDVERELREAAKK 480

Query: 564  QSVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEA 623
             S+  + K+   + KR GFSD QIA      E++VR+ R S G++ ++K VDTCAAEFEA
Sbjct: 481  YSIDEVPKELLRKAKRFGFSDYQIAKIFGVDERDVRKARKSKGIVATFKMVDTCAAEFEA 540

Query: 624  NTPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMM 683
             TPY YS+Y+ E ++ P+++KKV+ILG GPNRIGQGIEFDYCC H  +SL+  GYETIM+
Sbjct: 541  KTPYYYSTYEEENDAVPSKRKKVMILGSGPNRIGQGIEFDYCCVHAVYSLKEEGYETIMV 600

Query: 684  NSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLD 743
            N NPETVSTDYDTSDRLYFEP+T EDV+N+ + E+PEG++VQFGGQTPL ++  + +   
Sbjct: 601  NCNPETVSTDYDTSDRLYFEPITHEDVMNIYENEKPEGVLVQFGGQTPLNIAKQLEE--- 657

Query: 744  EHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAK 803
                   SG    +I GTS DSID AEDR+RF  I ++L I QP+ GIA S  +A  +AK
Sbjct: 658  -------SG---AKILGTSVDSIDIAEDRKRFAEICRKLGIPQPENGIAFSVEEAKEVAK 707

Query: 804  EIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDA 863
            +IGYPV+VRPSYVLGGRAMEIVY +ETL  Y+  A+EV PE+P+LIDK+L DAIE++VDA
Sbjct: 708  KIGYPVLVRPSYVLGGRAMEIVYDEETLERYIREALEVSPEKPILIDKFLEDAIEVEVDA 767

Query: 864  LADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGL 923
            + D    V+IGGIMEHIE+AGVHSGDSAC++P +++S   +D I  +T KLA  L V GL
Sbjct: 768  VCDG-EEVLIGGIMEHIEEAGVHSGDSACVLPPQSLSKEVIDKIIDYTRKLALELKVIGL 826

Query: 924  MNCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVI 983
            +N QYA+  + +VY+LEANPRASRTVPFVSKA G PLAK AA VM GK L +LG  + + 
Sbjct: 827  INVQYAVKDN-EVYILEANPRASRTVPFVSKATGIPLAKIAAKVMMGKKLKELGVKERLF 885

Query: 984  PKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGT 1043
            P HVSVKEAV PF K  G D +LGPEM+STGEVMGID  F +A+ KAQ+AAG KLP  GT
Sbjct: 886  PDHVSVKEAVFPFLKLPGVDPVLGPEMKSTGEVMGIDYDFGLAYYKAQLAAGMKLPTEGT 945

Query: 1044 VFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDM 1103
            VF+S+    +  +  +AK   ++GF+I++T GTA FL+  GI  E V K+ +GRP+  D+
Sbjct: 946  VFISVRKHDREKILPVAKKLKEMGFRILATDGTAQFLKEHGIDAEIVPKISQGRPNVIDL 1005

Query: 1104 VANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTVT 1163
            + NG+I +++ T SG    + +G  +RR  + Y +P ITT SGALA  + I +++   ++
Sbjct: 1006 IINGEIDLIINTPSGRR-GKTEGYMIRRAAVDYNIPYITTYSGALAAVKGIEAIRKAELS 1064

Query: 1164 MTALQDFFD 1172
            + +LQ++ +
Sbjct: 1065 IKSLQEYHE 1073


>gi|322419241|ref|YP_004198464.1| carbamoyl-phosphate synthase large subunit [Geobacter sp. M18]
 gi|320125628|gb|ADW13188.1| carbamoyl-phosphate synthase, large subunit [Geobacter sp. M18]
          Length = 1082

 Score = 1327 bits (3435), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 666/1097 (60%), Positives = 828/1097 (75%), Gaps = 31/1097 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++KILI+GAGPIVIGQACEFDYSGTQACKALKEEG++V+L+NSNPATIMTDP  AD
Sbjct: 3    KRTDIKKILIIGAGPIVIGQACEFDYSGTQACKALKEEGFQVVLLNSNPATIMTDPDFAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+TPE++  ++EKERPDA+LPT+GGQTALN AVA+AE+G LEK+GVELIGAKL A
Sbjct: 63   ATYIEPVTPEVLAAIIEKERPDAVLPTLGGQTALNTAVAVAENGTLEKFGVELIGAKLPA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            IK AEDR LFK+AM  IG+  P SG+ +   E + +   +G FP IIRP+FTLGGTGGGI
Sbjct: 123  IKMAEDRTLFKEAMVRIGLDIPRSGLAHNYQESMDVIKHVG-FPAIIRPSFTLGGTGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN EE+E +  AG+ AS T ++LVE+SL+GWKEYELEVMRD ADNVVI+CSIEN D MG
Sbjct: 182  AYNMEEYERMSMAGIEASPTDEILVEESLIGWKEYELEVMRDTADNVVIVCSIENFDAMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ LRD S+ IIREIGV+ GGSN+QF +NP +G ++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQILRDASLKIIREIGVDTGGSNIQFGINPKNGRLIVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRF 447
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD+I NDITK+TPA FEP+IDYVVTKIPRF
Sbjct: 302  PRVSRSSALASKATGFPIAKIAAKLAVGYTLDEITNDITKETPACFEPTIDYVVTKIPRF 361

Query: 448  AFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLE---CGFS----GWGCSNVK 500
             FEKFP ++  LTTQMKSVGE M++GRTF+ESFQKALRSLE   CGF     G G    +
Sbjct: 362  TFEKFPAADATLTTQMKSVGEVMSIGRTFKESFQKALRSLEIGSCGFESRFFGVGGDTRR 421

Query: 501  ELDWDWEQLKY-SLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQ 559
             L      L +  LR PN DR+  +  A + GM VDEI+ L+ ID WFL   +++I++E+
Sbjct: 422  ALTEKERTLLHDKLRTPNCDRLWYVGDAFRCGMTVDEIYGLTAIDPWFLHNIRQIIEMEE 481

Query: 560  FL----LTQSVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVD 615
             L    +   V    +D  ++ KR GFSDK +    K +E EVRE RLS+GV P +KRVD
Sbjct: 482  ELKQVEVKVEVKENLRDILWDAKRYGFSDKYLGQLWKISELEVRELRLSVGVKPVFKRVD 541

Query: 616  TCAAEFEANTPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQS 675
            TCAAEF A+TPY+YS+Y+ ECE+ PT +KK++ILGGGPNRIGQGIEFDYCC H  F+L  
Sbjct: 542  TCAAEFVAHTPYLYSTYEEECEAEPTDRKKIIILGGGPNRIGQGIEFDYCCVHGVFALSE 601

Query: 676  AGYETIMMNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLS 735
             GYETIM+N NPETVSTDYDTSDRLYFEPLT EDVLN++D+E+P G+IVQFGGQTPLKL+
Sbjct: 602  DGYETIMVNCNPETVSTDYDTSDRLYFEPLTFEDVLNIVDVEKPTGVIVQFGGQTPLKLA 661

Query: 736  LPIHQYLDEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSE 795
            + + +               V I GTSPD+ID AEDRERF  ++++L + QP+ G A+S 
Sbjct: 662  VALEK-------------AGVPIIGTSPDAIDRAEDRERFQEMLQKLKLRQPENGTARSF 708

Query: 796  ADALAIAKEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSD 855
             +A A+A+ IGYPVVVRPSYVLGGRAMEIVY  + L  Y+  AV+  PE P+LIDK+L +
Sbjct: 709  EEAEAVAERIGYPVVVRPSYVLGGRAMEIVYDVDNLRRYMHTAVQASPEHPILIDKFLDE 768

Query: 856  AIEIDVDALADSCGNV-VIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKL 914
            AIEIDVDAL D  G V VIGGIMEHIE+AG+HSGDSAC +P  +IS   ++ I   T  +
Sbjct: 769  AIEIDVDALCD--GKVAVIGGIMEHIEEAGIHSGDSACSLPPYSISPEIVEEIRRQTKVM 826

Query: 915  AKRLNVCGLMNCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLN 974
            A  LNV GLMN QYA+    D+Y++E NPRASRT PFVSKA G PLAK AA VM+GK+L 
Sbjct: 827  ALELNVKGLMNVQYAVKND-DIYIIEVNPRASRTSPFVSKATGRPLAKIAARVMAGKTLA 885

Query: 975  DLGFTKEVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAA 1034
            +LG T+E+IP+H+SVKE+V PF KF G D +LGPEM+STGEVMGI  +F  A+AKAQ+ A
Sbjct: 886  ELGVTEEIIPEHISVKESVFPFAKFPGVDTILGPEMKSTGEVMGIGETFAKAYAKAQMGA 945

Query: 1035 GQKLPLSGTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMH 1094
              KLP +G VF+S+ D  K H+   AK   D GF++V+T GTA +L+ KGI V+ + K+ 
Sbjct: 946  NVKLPATGKVFISVKDSDKKHIVSAAKRLYDQGFELVATRGTASYLQEKGIPVQVINKVL 1005

Query: 1095 EGRPHAGDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAI 1154
            EGRPH  D + N +I M++ T+ G +    D   +RR  L + V   TT SGA A  + I
Sbjct: 1006 EGRPHIVDSIKNNEICMVINTTLG-AQAVADSYSIRRNTLIHNVAYYTTASGARAAVDGI 1064

Query: 1155 RSLKSNTVTMTALQDFF 1171
             +  ++ + + ++Q++ 
Sbjct: 1065 IATANSKLEVKSIQEYL 1081


>gi|33861382|ref|NP_892943.1| carbamoyl-phosphate synthase, large subunit [Prochlorococcus marinus
            subsp. pastoris str. CCMP1986]
 gi|33633959|emb|CAE19284.1| carbamoyl-phosphate synthase, large subunit [Prochlorococcus marinus
            subsp. pastoris str. CCMP1986]
          Length = 1099

 Score = 1327 bits (3434), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 657/1104 (59%), Positives = 832/1104 (75%), Gaps = 26/1104 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            +R DL++ILILG+GPIVIGQACEFDYSGTQACKAL++ GYE++L+NSNPA+IMTDP +A+
Sbjct: 3    QRGDLKRILILGSGPIVIGQACEFDYSGTQACKALRKAGYEIVLVNSNPASIMTDPEIAN 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
            +TYI P+TPE+V Q++ KE+PDA+LPTMGGQTALNLAV L+ES  L    VELIGA L A
Sbjct: 63   KTYIEPLTPEIVSQIILKEKPDAILPTMGGQTALNLAVKLSESDFLTNNNVELIGADLKA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR LFK++M+ I V   PSGI + L E   ++ +I  +PLIIRPAFTLGG GGGI
Sbjct: 123  INKAEDRKLFKESMENINVNVCPSGIASDLFEAREVSKQINSYPLIIRPAFTLGGVGGGI 182

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN EEF  +CK+GL  S ++Q+L+EKSL+GWKE+ELEVMRD ADNVVIICSIEN+DPMG
Sbjct: 183  AYNLEEFNDLCKSGLDESPSNQILIEKSLIGWKEFELEVMRDTADNVVIICSIENLDPMG 242

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTD+EYQRLRD S+ IIRE+GVE GGSN+QFAVNP +G+V+VIEMN
Sbjct: 243  VHTGDSITVAPAQTLTDREYQRLRDLSLKIIREVGVETGGSNIQFAVNPKNGDVIVIEMN 302

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRF 447
            PRVSRSSALASKATGFPIAK+AA LSVGY+LD+I NDITKKTPA FEPSIDYVVTK+PRF
Sbjct: 303  PRVSRSSALASKATGFPIAKIAALLSVGYTLDEIINDITKKTPACFEPSIDYVVTKVPRF 362

Query: 448  AFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDWE 507
            AFEKF GS  +L T MKSVGE+MA+GR+F+ESFQKALRSLE G  GW C ++++ + +  
Sbjct: 363  AFEKFKGSSNILNTSMKSVGESMAIGRSFEESFQKALRSLEIGIFGWECDSIEDFN-NDN 421

Query: 508  QLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVE-QFLLTQSV 566
             LK +L+ P  +R+  +  AM+ G     I+E++ ID WF+ + + + + + +FL    +
Sbjct: 422  DLKNNLQNPTAERILIVKKAMESGKTNSYINEITNIDLWFIEKLRNIFNFQNEFLKGNEL 481

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
            + + +D     K+ GFSD+QIA  T S   EVR  R  L V+P YK VDTC+AEF + TP
Sbjct: 482  TRIDRDLMLNAKQLGFSDQQIAKLTNSEFFEVRNYRKKLKVLPLYKTVDTCSAEFSSETP 541

Query: 627  YMYSSY------------DFECESAPTQK--KKVLILGGGPNRIGQGIEFDYCCCHTSFS 672
            Y YSSY            D E  SA   K  KK++ILGGGPNRIGQGIEFDYCCCH S+ 
Sbjct: 542  YHYSSYEEAFLHNNLNINDNEI-SADNHKHLKKIMILGGGPNRIGQGIEFDYCCCHASYQ 600

Query: 673  LQSAGYETIMMNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPL 732
              S GY+TIM+NSNPETVSTDYDTSD LYFEP+T+EDVLN+I+ E P G+IVQFGGQTPL
Sbjct: 601  ASSNGYQTIMVNSNPETVSTDYDTSDILYFEPVTLEDVLNIIEAENPYGLIVQFGGQTPL 660

Query: 733  KLSLPIHQYLDEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIA 792
            KLSLP+  +L+ +           +I GTSP SID AEDRE F  I++EL+I QP  GIA
Sbjct: 661  KLSLPLSNWLESYEGIKCKS----KILGTSPHSIDIAEDREEFTKILEELNIRQPLNGIA 716

Query: 793  KSEADALAIAKEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKY 852
            ++E +A+ +A  IG+P+VVRPSYVLGGRAMEIV     L  Y++ AV+V P+ P+L+D+Y
Sbjct: 717  RNEKEAMLVANNIGFPLVVRPSYVLGGRAMEIVKDKNDLSRYIKEAVKVSPDHPILLDQY 776

Query: 853  LSDAIEIDVDALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTI 912
            LS+AIEIDVDAL D  G+VVI G+MEH+E AG+HSGDSAC +P+ ++S   ++T+  WT 
Sbjct: 777  LSNAIEIDVDALCDKTGSVVIAGLMEHVEPAGIHSGDSACCLPSISLSQETIETVKKWTK 836

Query: 913  KLAKRLNVCGLMNCQYAITTSGD----VYLLEANPRASRTVPFVSKAIGHPLAKYAALVM 968
             +A RLNV GL+N Q+AI    +    +++LEANPRASRT+PFVSKAIG P+AK A  +M
Sbjct: 837  LIANRLNVVGLINLQFAIRNHSNEENQLFILEANPRASRTIPFVSKAIGKPVAKLATQLM 896

Query: 969  SGKSLNDLGFTKEVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFA 1028
             G SL D+ FTKE+IPK+ +VKEAVLPF++F G D LLGPEMRSTGEVMG+  +F +A+A
Sbjct: 897  QGSSLKDINFTKELIPKYQAVKEAVLPFKRFPGSDALLGPEMRSTGEVMGLADNFGLAYA 956

Query: 1029 KAQIAAGQKLPLSGTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVE 1088
            K+++AAG  +P  G  FLS NDL K  LE IA+  + +GFK+V+T GTA +L   GI V+
Sbjct: 957  KSELAAGNGVPSEGVAFLSTNDLDKDKLEYIARELIVLGFKLVATKGTAKYLFNLGIEVD 1016

Query: 1089 RVLKMHEGRPHAGDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGAL 1148
             VLK+HEGRP+  D + +G IQ+++ T  G      D   LRR  L Y +P  TT+ GA 
Sbjct: 1017 EVLKVHEGRPNIEDSIRSGLIQLVINTPVGSQALHDDAY-LRRASLEYNIPTFTTIPGAK 1075

Query: 1149 ANAEAIRSLKSNTVTMTALQDFFD 1172
            A  +AI+SL+ N +   +LQ+  +
Sbjct: 1076 AALQAIKSLRLNKIDTLSLQEIHN 1099


>gi|11498873|ref|NP_070102.1| carbamoyl-phosphate synthase large subunit [Archaeoglobus fulgidus
            DSM 4304]
 gi|22095482|sp|O28994.1|CARB_ARCFU RecName: Full=Carbamoyl-phosphate synthase large chain; AltName:
            Full=Carbamoyl-phosphate synthetase ammonia chain
 gi|2649305|gb|AAB89970.1| carbamoyl-phosphate synthase, large (or ammonia) subunit (carB)
            [Archaeoglobus fulgidus DSM 4304]
          Length = 1076

 Score = 1325 bits (3428), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 652/1090 (59%), Positives = 832/1090 (76%), Gaps = 23/1090 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KR D+RKI+++G+GPIVIGQA EFDYSG+QACKAL+EEGYEV+L+NSNPATIMTDP +AD
Sbjct: 3    KREDIRKIMVIGSGPIVIGQAAEFDYSGSQACKALREEGYEVVLVNSNPATIMTDPEMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
            R YI P+  E+V +++E+E PDALLPT+GGQTALNLAV L E G L+KYGVELIGAK +A
Sbjct: 63   RVYIEPLDAEIVAKIIERETPDALLPTLGGQTALNLAVQLTEMGVLDKYGVELIGAKFEA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            IKKAEDR+LFK+AM+ IG+  P S + + + E ++IA+EIG +P+++RPAFTLGGTGGGI
Sbjct: 123  IKKAEDRELFKEAMRKIGLDVPKSDVAHDVSEALAIADEIG-YPVVVRPAFTLGGTGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EE   I + G+  S+ +QVL+E+ +LGWKE+ELEVMRDLADNVVIICSIEN DPMG
Sbjct: 182  AYNREELREIAERGIKMSMINQVLIEEGVLGWKEFELEVMRDLADNVVIICSIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTD EYQ LRD +I IIREIGVE GGSN+QFAV+P +G V+ IEMN
Sbjct: 242  VHTGDSITVAPAQTLTDVEYQYLRDAAIKIIREIGVETGGSNIQFAVHPENGRVVAIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRF 447
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD+IPNDITK+TPASFEP+IDYVV KIPRF
Sbjct: 302  PRVSRSSALASKATGFPIAKIAAKLAVGYTLDEIPNDITKETPASFEPTIDYVVVKIPRF 361

Query: 448  AFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDWE 507
            AF+KFP +  +L +QMKSVGE MA+GRTF+E+ QKA+RSLE G  G GC   K+ +   E
Sbjct: 362  AFDKFPTANQVLGSQMKSVGEVMAVGRTFEEALQKAIRSLEIGRYGLGCDG-KDKEVTME 420

Query: 508  QLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVE----QFLLT 563
            +++  LR PN  R+  I  A++KGM V+EI+EL+ ID WF+ + K L++ E    Q    
Sbjct: 421  EIRERLRYPNASRVFYIRYALQKGMSVNEIYELTKIDPWFIDKIKNLVEFEEQLKQIAER 480

Query: 564  QSVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEA 623
             S+  + K+   + K  G+SD+Q+A    +TE+EVR  R   G+   YK VDTCAAEFEA
Sbjct: 481  MSIEEVPKEILKKAKELGYSDRQLAVIFNTTEREVRRVRKGKGLRVVYKMVDTCAAEFEA 540

Query: 624  NTPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMM 683
             TPY YS+Y+ E E+  +++KKV+ILG GPNRIGQGIEFDYCC H  FSL+  GYETIM+
Sbjct: 541  KTPYYYSTYEDENEALRSERKKVMILGAGPNRIGQGIEFDYCCVHAVFSLKDEGYETIMV 600

Query: 684  NSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLD 743
            N NPETVSTDYDTSDRLYFEP+T EDV+N+ + E+PEG+IVQFGGQTPL ++  +     
Sbjct: 601  NCNPETVSTDYDTSDRLYFEPITHEDVMNIYENEQPEGVIVQFGGQTPLNIARELE---- 656

Query: 744  EHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAK 803
                     D   RI GTS DSID AEDRERF  +++ L+I QP+ GIA S  +A  IA+
Sbjct: 657  ---------DSGARILGTSVDSIDIAEDRERFAELLERLNIPQPENGIAHSLEEAKEIAR 707

Query: 804  EIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDA 863
            +IG+PV+VRPSYVLGGRAMEIVY +ETL  Y+  A+EV PE+P+LIDK+L DAIE++VDA
Sbjct: 708  KIGFPVLVRPSYVLGGRAMEIVYDEETLERYITEALEVSPEKPILIDKFLEDAIEVEVDA 767

Query: 864  LADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGL 923
            L D    VVIGGIMEHIE+AGVHSGDSAC++P  ++    ++TI  +T KLA  LNV GL
Sbjct: 768  LCDG-EEVVIGGIMEHIEEAGVHSGDSACVLPPVSLDEVTINTIVDYTRKLALALNVVGL 826

Query: 924  MNCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVI 983
            +N QYA+   G VY+LEANPRASRTVPFVSKA G PLAK AA +M GK L +LG  +++ 
Sbjct: 827  INIQYAV-KDGKVYVLEANPRASRTVPFVSKATGIPLAKIAAKLMMGKKLRELGVKEKLK 885

Query: 984  PKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGT 1043
             KHV+VKEAV PF K  G D +LGPEM+STGEVMGID  F +A+ KA++AAG KLPL GT
Sbjct: 886  LKHVAVKEAVFPFIKLPGVDPVLGPEMKSTGEVMGIDYDFGLAYYKAELAAGMKLPLKGT 945

Query: 1044 VFLSLNDLTK-PHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGD 1102
            VF+S+    K   L  +A+ F ++GF+I++T GT  FL   GI  + +LK+ +GRP+  D
Sbjct: 946  VFISVRRKDKNDRLLYLARKFKELGFRIIATDGTRDFLVQNGIEADLILKISQGRPNILD 1005

Query: 1103 MVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTV 1162
             + NGQ+ +++ T SG    + +G  +RR  + Y V  ITT++GA+A   AI ++KS  +
Sbjct: 1006 AIVNGQVDLIINTPSGKR-GRTEGYMIRRAAVDYGVAHITTLAGAMAAVRAIEAVKSRKM 1064

Query: 1163 TMTALQDFFD 1172
             + ++Q++ +
Sbjct: 1065 VVKSIQEYHE 1074



 Score =  258 bits (658), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 151/405 (37%), Positives = 234/405 (57%), Gaps = 19/405 (4%)

Query: 79  ASSKDQKLGKRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPAT 138
           ++ +D+    R++ +K++ILGAGP  IGQ  EFDY    A  +LK+EGYE I++N NP T
Sbjct: 547 STYEDENEALRSERKKVMILGAGPNRIGQGIEFDYCCVHAVFSLKDEGYETIMVNCNPET 606

Query: 139 IMTDPGLADRTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGV 198
           + TD   +DR Y  P+T E V  + E E+P+ ++   GGQT LN+A  L +SGA      
Sbjct: 607 VSTDYDTSDRLYFEPITHEDVMNIYENEQPEGVIVQFGGQTPLNIARELEDSGA------ 660

Query: 199 ELIGAKLDAIKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAF 258
            ++G  +D+I  AEDR+ F + ++ + +  P +GI ++L+E   IA +IG FP+++RP++
Sbjct: 661 RILGTSVDSIDIAEDRERFAELLERLNIPQPENGIAHSLEEAKEIARKIG-FPVLVRPSY 719

Query: 259 TLGGTGGGIAYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIIC 318
            LGG    I Y++E  E      L  S    +L++K L    E E++ + D  + VVI  
Sbjct: 720 VLGGRAMEIVYDEETLERYITEALEVSPEKPILIDKFLEDAIEVEVDALCD-GEEVVIGG 778

Query: 319 SIENVDPMGVHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVD 378
            +E+++  GVH+GDS  V P  +L +     + DY+  +   + V  G  N+Q+AV   D
Sbjct: 779 IMEHIEEAGVHSGDSACVLPPVSLDEVTINTIVDYTRKLALALNV-VGLINIQYAVK--D 835

Query: 379 GEVMVIEMNPRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSID 438
           G+V V+E NPR SR+    SKATG P+AK+AAKL +G  L ++   + +K        + 
Sbjct: 836 GKVYVLEANPRASRTVPFVSKATGIPLAKIAAKLMMGKKLREL--GVKEKL------KLK 887

Query: 439 YVVTKIPRFAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKA 483
           +V  K   F F K PG +P+L  +MKS GE M +   F  ++ KA
Sbjct: 888 HVAVKEAVFPFIKLPGVDPVLGPEMKSTGEVMGIDYDFGLAYYKA 932


>gi|284161775|ref|YP_003400398.1| carbamoyl-phosphate synthase large subunit [Archaeoglobus profundus
            DSM 5631]
 gi|284011772|gb|ADB57725.1| carbamoyl-phosphate synthase, large subunit [Archaeoglobus profundus
            DSM 5631]
          Length = 1091

 Score = 1323 bits (3425), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 656/1107 (59%), Positives = 840/1107 (75%), Gaps = 27/1107 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KR D++KI+++G+GPIVIGQA EFDYSG+QACKALKEEGYEV+L+NSNPATIMTDP +AD
Sbjct: 3    KRGDIKKIMVIGSGPIVIGQAAEFDYSGSQACKALKEEGYEVVLVNSNPATIMTDPDMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
            R YI P+T ++V +++E+E PDALLPT+GGQTALNLAV L E G L++YGVELIGAKLDA
Sbjct: 63   RVYIEPLTADVVAKIIERETPDALLPTLGGQTALNLAVELGEMGVLDEYGVELIGAKLDA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            IKKAEDR+LFK+ M+ IG+  P S I   +DE ++IA EIG +P+++RPAFTLGGTGGGI
Sbjct: 123  IKKAEDRELFKECMRKIGLDVPRSDIARDVDEALAIAEEIG-YPVVVRPAFTLGGTGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYNK+E   I + GL  SL  QVL+E+ ++GWKEYELEVMRDLADNVVIICSIEN DPMG
Sbjct: 182  AYNKKELREIVEKGLKLSLIHQVLIEEGVIGWKEYELEVMRDLADNVVIICSIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            +HTGDSITVAPAQTL+D EYQ+LRD +I IIR IGVE GGSN+QFAV+P +G ++ IEMN
Sbjct: 242  IHTGDSITVAPAQTLSDVEYQQLRDAAIKIIRAIGVETGGSNIQFAVHPENGRIVAIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRF 447
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD+IPNDITK+TPASFEP+IDYVV KIPRF
Sbjct: 302  PRVSRSSALASKATGFPIAKIAAKLAVGYTLDEIPNDITKETPASFEPTIDYVVVKIPRF 361

Query: 448  AFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDWE 507
            AF+KFP ++  L TQMKSVGE MA+GRTF+E+ QKA+RSLE G  G GC   K+ D   E
Sbjct: 362  AFDKFPTADSTLGTQMKSVGEVMAIGRTFEEALQKAIRSLEIGRYGLGCDG-KDKDPSRE 420

Query: 508  QLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFL------ 561
            ++   LR PN DR+  I  A+KKG  VDEI+EL+ ID+WF+ + K ++++E+ L      
Sbjct: 421  EIIQKLRTPNADRIFYIRYALKKGFTVDEIYELTKIDRWFIRKIKNIVEMEEKLKEWAKK 480

Query: 562  LTQSVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEF 621
                +  +  +   E KR GFSD Q+A+  K+ E+ VR  R   G+   +K VDTCAAEF
Sbjct: 481  TNYDIEKVPYEVLREAKRLGFSDYQLAYIFKTDERTVRRARKKRGISAVFKMVDTCAAEF 540

Query: 622  EANTPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETI 681
            EA TPY YS+Y+ E ++ PT +KKV+ILG GPNRIGQGIEFDYCCCH  FSL+  GYETI
Sbjct: 541  EAKTPYYYSTYEDENDAPPTPRKKVMILGSGPNRIGQGIEFDYCCCHAVFSLKEEGYETI 600

Query: 682  MMNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQY 741
            M+N NPETVSTDYDTSDRLYFEP+T EDV+N+ D E+PEG+IVQFGGQTPL ++  + + 
Sbjct: 601  MVNCNPETVSTDYDTSDRLYFEPITHEDVMNIYDNEKPEGVIVQFGGQTPLNIAKDLEE- 659

Query: 742  LDEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAI 801
                     SG    +I GTS DSID AEDRERF+ +++EL I QP+ GIA S  +A  +
Sbjct: 660  ---------SG---AKILGTSVDSIDFAEDRERFSKLLEELGIPQPEHGIAHSVEEAKEV 707

Query: 802  AKEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDV 861
            A++IGYPV+VRPSYVLGGRAMEIVY DE L  Y+  AVEV PE+P+LIDK+L DA+E +V
Sbjct: 708  ARKIGYPVLVRPSYVLGGRAMEIVYDDEELERYVREAVEVSPEKPILIDKFLEDAVEAEV 767

Query: 862  DALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVC 921
            DAL D    VVIGGI+EHIE+AGVHSGDSAC+IP  ++    +DTI  +T K+A  L V 
Sbjct: 768  DALCDG-EEVVIGGILEHIEEAGVHSGDSACVIPPISLPKHIIDTIIDYTRKIALALKVV 826

Query: 922  GLMNCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKE 981
            GL+N Q+AI  +  VY+LEANPRASRTVPF+SKA G PLAK AA +M GK L +LG  + 
Sbjct: 827  GLINIQFAIKDNV-VYVLEANPRASRTVPFISKATGLPLAKIAAKLMMGKKLRELGIKER 885

Query: 982  VIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLS 1041
            +  KHV+VKEAV PF+K  G D +LGPEM+STGEVMGID  F +A+ KAQ+ AG +LPL 
Sbjct: 886  LNLKHVAVKEAVFPFQKLPGVDPVLGPEMKSTGEVMGIDYDFGLAYYKAQLGAGMRLPLE 945

Query: 1042 GTVFLSLNDLTK-PHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHA 1100
            GT F+S+ D  K   +  +AK   ++GF+I++T GTA +L+  G+ VE V K+ EGRP+ 
Sbjct: 946  GTAFISVKDKDKNEKIVWVAKKLKELGFRIIATRGTAEYLKRNGVDVEVVNKISEGRPNI 1005

Query: 1101 GDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSN 1160
             D + NG + +++ T  G    + +G  +RR  + Y +P ITT++GA+A  + I ++K  
Sbjct: 1006 LDEIINGNVHLIINTPKGKR-GRDEGYLIRRTAVDYNIPYITTLAGAIAAVKGIEAVKKR 1064

Query: 1161 TV-TMTALQDFF-DVETASGSSENLQS 1185
            ++ T+ ++Q++  +VE   G +++ +S
Sbjct: 1065 SIMTIKSIQEYHKEVEETIGVADDKES 1091



 Score =  253 bits (645), Expect = 6e-64,   Method: Compositional matrix adjust.
 Identities = 149/405 (36%), Positives = 233/405 (57%), Gaps = 19/405 (4%)

Query: 79  ASSKDQKLGKRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPAT 138
           ++ +D+     T  +K++ILG+GP  IGQ  EFDY    A  +LKEEGYE I++N NP T
Sbjct: 549 STYEDENDAPPTPRKKVMILGSGPNRIGQGIEFDYCCCHAVFSLKEEGYETIMVNCNPET 608

Query: 139 IMTDPGLADRTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGV 198
           + TD   +DR Y  P+T E V  + + E+P+ ++   GGQT LN+A  L ESGA      
Sbjct: 609 VSTDYDTSDRLYFEPITHEDVMNIYDNEKPEGVIVQFGGQTPLNIAKDLEESGA------ 662

Query: 199 ELIGAKLDAIKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAF 258
           +++G  +D+I  AEDR+ F + ++ +G+  P  GI ++++E   +A +IG +P+++RP++
Sbjct: 663 KILGTSVDSIDFAEDRERFSKLLEELGIPQPEHGIAHSVEEAKEVARKIG-YPVLVRPSY 721

Query: 259 TLGGTGGGIAYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIIC 318
            LGG    I Y+ EE E   +  +  S    +L++K L    E E++ + D  + VVI  
Sbjct: 722 VLGGRAMEIVYDDEELERYVREAVEVSPEKPILIDKFLEDAVEAEVDALCD-GEEVVIGG 780

Query: 319 SIENVDPMGVHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVD 378
            +E+++  GVH+GDS  V P  +L       + DY+  I   + V  G  N+QFA+   D
Sbjct: 781 ILEHIEEAGVHSGDSACVIPPISLPKHIIDTIIDYTRKIALALKV-VGLINIQFAIK--D 837

Query: 379 GEVMVIEMNPRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSID 438
             V V+E NPR SR+    SKATG P+AK+AAKL +G  L ++   I ++       ++ 
Sbjct: 838 NVVYVLEANPRASRTVPFISKATGLPLAKIAAKLMMGKKLREL--GIKERL------NLK 889

Query: 439 YVVTKIPRFAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKA 483
           +V  K   F F+K PG +P+L  +MKS GE M +   F  ++ KA
Sbjct: 890 HVAVKEAVFPFQKLPGVDPVLGPEMKSTGEVMGIDYDFGLAYYKA 934


>gi|253700925|ref|YP_003022114.1| carbamoyl-phosphate synthase large subunit [Geobacter sp. M21]
 gi|251775775|gb|ACT18356.1| carbamoyl-phosphate synthase, large subunit [Geobacter sp. M21]
          Length = 1082

 Score = 1323 bits (3424), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 665/1097 (60%), Positives = 823/1097 (75%), Gaps = 31/1097 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++KILI+GAGPIVIGQACEFDYSGTQACKALKEEG+EV+L+NSNPATIMTDP  AD
Sbjct: 3    KRTDIKKILIIGAGPIVIGQACEFDYSGTQACKALKEEGFEVVLLNSNPATIMTDPDFAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+TPE++  ++EKERPDALLPT+GGQTALN AVA+AE+G LEK+GVELIGAKL A
Sbjct: 63   FTYIEPVTPEILAAIIEKERPDALLPTLGGQTALNTAVAVAENGTLEKFGVELIGAKLPA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            IKKAEDR LFK+AM  IG+  P SG+ +   E + +   +G FP IIRP+FTLGGTGGGI
Sbjct: 123  IKKAEDRTLFKEAMVKIGLDVPRSGLAHNYQEAMEVIKVVG-FPAIIRPSFTLGGTGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN EE+E +  AG+ AS T ++LVE+SL+GWKEYELEVMRD ADNVVIICSIEN D MG
Sbjct: 182  AYNMEEYERMSMAGIEASPTDEILVEESLIGWKEYELEVMRDTADNVVIICSIENFDAMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ LRD S+ IIREIGV+ GGSN+QF  NP +G ++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQILRDASLKIIREIGVDTGGSNIQFGTNPKNGRLIVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRF 447
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD+I NDITK+TPA FEP+IDYVVTKIPRF
Sbjct: 302  PRVSRSSALASKATGFPIAKIAAKLAVGYTLDEITNDITKETPACFEPTIDYVVTKIPRF 361

Query: 448  AFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLE---CGFS----GWGCSNVK 500
             FEKFP ++  LTTQMKSVGE M++GRTF+ESFQKALRSLE   CGF     G G    +
Sbjct: 362  TFEKFPAADATLTTQMKSVGEVMSIGRTFKESFQKALRSLEIGSCGFESKFFGVGGDTRR 421

Query: 501  EL-DWDWEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQ 559
             L + +   L   LR PN DR+  +  A + GM V+EI+ L+ ID WFL   +++I++E+
Sbjct: 422  ALTEKERNLLNDKLRTPNCDRLWYVGDAFRCGMTVEEIYALTAIDPWFLNNIRQIIEMEE 481

Query: 560  FL----LTQSVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVD 615
             L    + +       D  ++ KR GFSDK +    K  E EVRE RLS+GV P +KRVD
Sbjct: 482  ELKPVNIKKESGEKLHDILWDAKRYGFSDKYLGQLWKIPEAEVRELRLSVGVKPVFKRVD 541

Query: 616  TCAAEFEANTPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQS 675
            TCAAEF A+TPY+YS+Y+ ECE+ PT +KK++ILGGGPNRIGQGIEFDYCC H  F+L  
Sbjct: 542  TCAAEFVAHTPYLYSTYEEECEAEPTDRKKIIILGGGPNRIGQGIEFDYCCVHGVFALSE 601

Query: 676  AGYETIMMNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLS 735
             GYETIM+N NPETVSTDYDTSDRLYFEPLT EDVL+++D+E+P G+IVQFGGQTPLKL+
Sbjct: 602  DGYETIMVNCNPETVSTDYDTSDRLYFEPLTFEDVLHIVDVEKPTGVIVQFGGQTPLKLA 661

Query: 736  LPIHQYLDEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSE 795
            + + +               V I GTSPD+ID AEDRERF  ++++L + QP+ G A+S 
Sbjct: 662  VALEK-------------AGVPIIGTSPDAIDRAEDRERFQEMLQKLKLRQPENGTARSF 708

Query: 796  ADALAIAKEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSD 855
             ++  +A+ IGYPVVVRPSYVLGGRAMEIVY  + L  Y+  AV+  PE P+LIDK+L +
Sbjct: 709  EESEVVAERIGYPVVVRPSYVLGGRAMEIVYDVDNLRRYMHTAVQASPEHPILIDKFLDE 768

Query: 856  AIEIDVDALADSCGNV-VIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKL 914
            AIEIDVDAL D  G V VIGGIMEHIE+AG+HSGDSAC +P  +IS   ++ I   T  +
Sbjct: 769  AIEIDVDALCD--GQVAVIGGIMEHIEEAGIHSGDSACSLPPYSISKEIVEEIRRQTKMM 826

Query: 915  AKRLNVCGLMNCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLN 974
            A  LNV GLMN Q+A+    D+Y++E NPRASRT PFVSKA G PLAK AA VM+GK+L 
Sbjct: 827  ALELNVKGLMNVQFAV-KGNDIYIIEVNPRASRTSPFVSKATGRPLAKIAARVMAGKTLA 885

Query: 975  DLGFTKEVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAA 1034
            +LG T+E++P H+SVKE+V PF KF G D +LGPEM+STGEVMGI  +F  A+AKAQ+ A
Sbjct: 886  ELGVTEEIVPVHISVKESVFPFAKFPGVDTILGPEMKSTGEVMGIGDTFAKAYAKAQMGA 945

Query: 1035 GQKLPLSGTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMH 1094
              KLP SG VF+S+ D  K H+   AK   D GF++V+T GTA +L+ KGI V+ V K+ 
Sbjct: 946  NVKLPASGKVFISVKDTDKKHIVSAAKRLYDQGFELVATRGTASYLQEKGIPVQVVNKVI 1005

Query: 1095 EGRPHAGDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAI 1154
            EGRPH  D + N +I M++ T+ G +    D   +RR  L   V   TT SGA A  + I
Sbjct: 1006 EGRPHIVDAIKNNEICMVINTTHG-AQAVADSYSIRRNTLINNVAYYTTASGARAAVDGI 1064

Query: 1155 RSLKSNTVTMTALQDFF 1171
             ++  + + + ++Q + 
Sbjct: 1065 IAMSKSKLEVNSIQHYL 1081


>gi|258404458|ref|YP_003197200.1| carbamoyl-phosphate synthase large subunit [Desulfohalobium retbaense
            DSM 5692]
 gi|257796685|gb|ACV67622.1| carbamoyl-phosphate synthase, large subunit [Desulfohalobium
            retbaense DSM 5692]
          Length = 1078

 Score = 1322 bits (3422), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 656/1094 (59%), Positives = 832/1094 (76%), Gaps = 25/1094 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD+RKI+++G+GPI+IGQACEFDYSGTQA KALKEEGYEV+LINSNPATIMTDPGLAD
Sbjct: 3    KRTDIRKIMLIGSGPIIIGQACEFDYSGTQALKALKEEGYEVVLINSNPATIMTDPGLAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
            RTY+ P+ PE V +++ KERPDALLPT+GGQT LN AV++AESG LEKYGVELIGA L+ 
Sbjct: 63   RTYVEPLEPESVAKIIAKERPDALLPTLGGQTGLNTAVSVAESGVLEKYGVELIGASLEV 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I+KAE R  F+ AM+ IG+  P SGI ++L+E     N +  FP+I+RPAFTLGGTGGG+
Sbjct: 123  IQKAESRRQFRTAMENIGLTVPQSGIASSLEEVREWTNTLS-FPMIVRPAFTLGGTGGGV 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+E+ E I + GLAAS + +V++E+S+LGWKEYELEVMRD  DN VIICSIEN+D MG
Sbjct: 182  AYNREDLEEIARQGLAASPSHEVMLEESVLGWKEYELEVMRDKHDNCVIICSIENLDAMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDS+TVAPAQTLTD+E+Q++RD S+AI+REIGVE GGSNVQFAVNP +G+++VIEMN
Sbjct: 242  VHTGDSVTVAPAQTLTDREFQKMRDASLAIMREIGVETGGSNVQFAVNPENGDMVVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRF 447
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD+IPNDIT++T ASFEP+IDY V KIPRF
Sbjct: 302  PRVSRSSALASKATGFPIAKIAAKLAVGYTLDEIPNDITRETMASFEPTIDYCVVKIPRF 361

Query: 448  AFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDWE 507
             FEKFPGS+  LTT MKSVGE MA+GRTF+ES QK LRSLE G +G G +   E D D E
Sbjct: 362  TFEKFPGSQDFLTTTMKSVGETMAIGRTFKESLQKGLRSLEVGMAGLG-NGTGEDDLDAE 420

Query: 508  QLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVE----QFLLT 563
             L   L+ PN  R+ AI  A+++GM ++ +++ +F+D WFL Q K ++D E     F L 
Sbjct: 421  SLMALLKTPNSQRLFAIRDALRQGMPLETLYQATFVDPWFLQQIKAIVDCEAELKHFSLE 480

Query: 564  QSVSN---MTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAE 620
            Q++S      ++     K  GFSD Q+A   K TE ++R+ R+ +G+  +YK VDTCAAE
Sbjct: 481  QAISADNPHMEEVLRHAKEFGFSDLQLANLWKRTEDDIRQLRIQMGITATYKLVDTCAAE 540

Query: 621  FEANTPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYET 680
            FEA TPY YSSY+ E E+  T K+KV+ILGGGPNRIGQGIEFDYCC H S++L+    E+
Sbjct: 541  FEAYTPYYYSSYERENENRATGKRKVVILGGGPNRIGQGIEFDYCCVHASYALRDMDIES 600

Query: 681  IMMNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQ 740
            +M+NSNPETVSTDYDTSDRLYFEPLT EDVLN+I+ E+PEG+IVQFGGQTPL L++P+ +
Sbjct: 601  VMVNSNPETVSTDYDTSDRLYFEPLTREDVLNIIEQEQPEGVIVQFGGQTPLNLAVPLLR 660

Query: 741  YLDEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALA 800
                           V I GT+PDSID AEDRERF+A++ +L ++QP  G+A SE  AL 
Sbjct: 661  -------------AGVPILGTTPDSIDRAEDRERFHALLNKLGLKQPDNGLATSEEGALD 707

Query: 801  IAKEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEID 860
            +A+ IGYPVVVRPSYVLGGRAMEIVY  + L  Y  +AV   P+ P+LIDK+L  A+EID
Sbjct: 708  VAERIGYPVVVRPSYVLGGRAMEIVYDSDELKNYFRDAVVASPDHPILIDKFLQGAVEID 767

Query: 861  VDALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNV 920
            VDAL D      +GG+MEHIE+AGVHSGDSAC++P  T+S   +D I   +  LA+ L V
Sbjct: 768  VDALCDGT-QTYVGGVMEHIEEAGVHSGDSACVLPPHTVSQETIDEIRRQSSALAEELGV 826

Query: 921  CGLMNCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTK 980
             GLMN Q+A+  +G++++LE NPRASRTVPFVSKA G PLAK A  VM G++L DL    
Sbjct: 827  VGLMNVQFAV-QNGEIFILEVNPRASRTVPFVSKATGVPLAKLATQVMMGRTLEDLNPWS 885

Query: 981  EVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPL 1040
                 H++VKEAV+PF +F G DVLLGPEMRSTGEVMG+D  F +AF KAQ+ AGQKLP 
Sbjct: 886  MRQWGHLAVKEAVMPFNRFPGVDVLLGPEMRSTGEVMGVDTEFGLAFMKAQLGAGQKLPA 945

Query: 1041 SGTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHA 1100
            SGTVF+S+ND  K  +   A+ F  IG +IVST GTA +L   G+  ERV K++EGRP+A
Sbjct: 946  SGTVFISVNDADKDAVVEAARTFARIGLRIVSTEGTAAYLTRAGVDCERVNKVYEGRPNA 1005

Query: 1101 GDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSN 1160
             D++ NG+I +++ TSSG    + D   LR+  L Y +P  TTV+GA A A+AI +L+ +
Sbjct: 1006 IDLIKNGEIDLVINTSSGKKTIR-DSSSLRQTTLLYGIPYTTTVAGARAMAQAIAALQGH 1064

Query: 1161 TVTMTALQDFFDVE 1174
             + + +LQ+++ +E
Sbjct: 1065 GLEVKSLQEYYGME 1078



 Score =  246 bits (629), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 141/405 (34%), Positives = 229/405 (56%), Gaps = 19/405 (4%)

Query: 79  ASSKDQKLGKRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPAT 138
           +S + +   + T  RK++ILG GP  IGQ  EFDY    A  AL++   E +++NSNP T
Sbjct: 550 SSYERENENRATGKRKVVILGGGPNRIGQGIEFDYCCVHASYALRDMDIESVMVNSNPET 609

Query: 139 IMTDPGLADRTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGV 198
           + TD   +DR Y  P+T E V  ++E+E+P+ ++   GGQT LNLAV L       + GV
Sbjct: 610 VSTDYDTSDRLYFEPLTREDVLNIIEQEQPEGVIVQFGGQTPLNLAVPLL------RAGV 663

Query: 199 ELIGAKLDAIKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAF 258
            ++G   D+I +AEDR+ F   +  +G+K P +G+  + +  + +A  IG +P+++RP++
Sbjct: 664 PILGTTPDSIDRAEDRERFHALLNKLGLKQPDNGLATSEEGALDVAERIG-YPVVVRPSY 722

Query: 259 TLGGTGGGIAYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIIC 318
            LGG    I Y+ +E +   +  + AS    +L++K L G  E +++ + D      +  
Sbjct: 723 VLGGRAMEIVYDSDELKNYFRDAVVASPDHPILIDKFLQGAVEIDVDALCD-GTQTYVGG 781

Query: 319 SIENVDPMGVHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVD 378
            +E+++  GVH+GDS  V P  T++ +    +R  S A+  E+GV  G  NVQFAV   +
Sbjct: 782 VMEHIEEAGVHSGDSACVLPPHTVSQETIDEIRRQSSALAEELGV-VGLMNVQFAVQ--N 838

Query: 379 GEVMVIEMNPRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSID 438
           GE+ ++E+NPR SR+    SKATG P+AK+A ++ +G +L+ +        P S      
Sbjct: 839 GEIFILEVNPRASRTVPFVSKATGVPLAKLATQVMMGRTLEDL-------NPWSMR-QWG 890

Query: 439 YVVTKIPRFAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKA 483
           ++  K     F +FPG + LL  +M+S GE M +   F  +F KA
Sbjct: 891 HLAVKEAVMPFNRFPGVDVLLGPEMRSTGEVMGVDTEFGLAFMKA 935


>gi|319790533|ref|YP_004152166.1| carbamoyl-phosphate synthase, large subunit [Thermovibrio
            ammonificans HB-1]
 gi|317115035|gb|ADU97525.1| carbamoyl-phosphate synthase, large subunit [Thermovibrio
            ammonificans HB-1]
          Length = 1073

 Score = 1321 bits (3418), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 664/1089 (60%), Positives = 833/1089 (76%), Gaps = 26/1089 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTDLRKILI+G+GPIVIGQA EFDYSGTQACKALKEEGY+V+L+NSNPATIMTDP +AD
Sbjct: 3    KRTDLRKILIIGSGPIVIGQAAEFDYSGTQACKALKEEGYQVVLVNSNPATIMTDPDIAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
            RTYI P+T E++E+++EKERPDALLPT+GGQTALNLAV L E+G LEKYGVELIGAK++A
Sbjct: 63   RTYIEPLTVEVLEKIIEKERPDALLPTVGGQTALNLAVKLHEAGILEKYGVELIGAKVEA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            IKKAEDR+LFK+AM  IG++ P SG  +TL+E + +  E+G  P IIRPAFTLGG GGG+
Sbjct: 123  IKKAEDRELFKEAMLKIGLEVPKSGTAHTLEEALEVVKEVG-LPAIIRPAFTLGGEGGGV 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN EEF+ I K GLAAS  S++L+E+S+LGWKEYELEVMRDL DNVVIICSIENVDPMG
Sbjct: 182  AYNIEEFKEIAKKGLAASPVSEILIEESVLGWKEYELEVMRDLNDNVVIICSIENVDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ LRD +IAIIREIGVE GGSNVQFAVNP +G V+VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQVLRDAAIAIIREIGVETGGSNVQFAVNPENGRVIVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRF 447
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++PNDITKKTPASFEP+IDY V K PR+
Sbjct: 302  PRVSRSSALASKATGFPIAKIAAKLAVGYTLDELPNDITKKTPASFEPAIDYCVVKFPRW 361

Query: 448  AFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDWE 507
            AFEKFP ++  LTT+MKSVGE MA+GRTF+E+  KA+RSLE G  G     V+ L     
Sbjct: 362  AFEKFPEADSTLTTRMKSVGEVMAIGRTFKEALLKAVRSLEIGRYGLTMKGVERLSDS-- 419

Query: 508  QLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSVS 567
            +L+  + VPN DR+  I  A ++G  +++++ELS ID+WFL   ++L+++E  L   +V 
Sbjct: 420  ELESRIAVPNADRIWYIAEAFRRGWSLEKLYELSRIDRWFLHNIRQLVELEGELKKHTVD 479

Query: 568  NMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTPY 627
             +  +     K+ GFSD++IA    +TEK VREKR SL  +  YK VDTCA EFEA TPY
Sbjct: 480  TVPGELLKWAKKWGFSDREIASLLGTTEKAVREKRKSLAPV-LYKTVDTCAGEFEAYTPY 538

Query: 628  MYSSYD-FECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSN 686
             YS+YD  ECE+ P++K+KV + G GPNRIGQG+EFDYCC H  ++L+  GYE  M+N N
Sbjct: 539  YYSTYDGRECEANPSKKEKVTVFGSGPNRIGQGVEFDYCCVHAVWALRELGYEAHMVNCN 598

Query: 687  PETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHR 746
            PETVSTDYDTSD+L+FEPLT+ED LNV++ E+P G++VQFGGQTPLKLS+P+ +      
Sbjct: 599  PETVSTDYDTSDKLFFEPLTLEDALNVVEKEKPLGVVVQFGGQTPLKLSVPLER------ 652

Query: 747  LPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEIG 806
                  +G V+I GTS +SID AEDRERF  ++  L ++QP  GIA+S  +A  IA+EIG
Sbjct: 653  ------EG-VKILGTSSESIDIAEDRERFRELLNRLGLKQPPSGIARSLEEAEKIAQEIG 705

Query: 807  YPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALAD 866
            +PV++RPSYVLGGRAM IVY+ E L  Y+  AVEV  E+PVLIDK+L DA+E DVDA+AD
Sbjct: 706  FPVLMRPSYVLGGRAMRIVYSMEELRQYMAEAVEVSEEKPVLIDKFLEDAVEFDVDAVAD 765

Query: 867  SCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNC 926
                VVIGG+MEHIE+AG+HSGDSAC++PT ++S   ++ I   T K+A  LNV GL+N 
Sbjct: 766  G-EEVVIGGVMEHIEEAGIHSGDSACVLPTFSVSRDIVEKIKEITRKIALELNVKGLINI 824

Query: 927  QYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPKH 986
            Q+A+   G++Y++E NPRASRTVPFVSKA G PLAK A  V  GK L +LG  KEV P++
Sbjct: 825  QFAV-KDGEIYIIEVNPRASRTVPFVSKATGIPLAKVATKVAMGKKLRELG-VKEVEPEY 882

Query: 987  VSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLS---GT 1043
             SVKEAV PF +F   D +LGPEM+STGEVMGID    IAF KAQ+AAG +LPL    G 
Sbjct: 883  YSVKEAVFPFNRFPEVDPVLGPEMKSTGEVMGIDPDVGIAFYKAQLAAGSRLPLDPSCGK 942

Query: 1044 VFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEG-RPHAGD 1102
            VF+S+ D  KP +  +AK   D+GFKIVST GT  FL  KGI VE V K+ EG RP+ GD
Sbjct: 943  VFISVKDKDKPKIYSVAKQLADMGFKIVSTEGTYRFLREKGIPVELVYKLQEGRRPNIGD 1002

Query: 1103 MVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTV 1162
            ++ NG++ +++ T +G +  + D   +RR  + Y +P  TTV GA     AI +++  ++
Sbjct: 1003 LIKNGEVCLIINTPTG-TRSKRDAYSIRRLAVNYGIPYYTTVRGAEMAVRAISAMRKGSL 1061

Query: 1163 TMTALQDFF 1171
             +  LQD++
Sbjct: 1062 NVKPLQDYY 1070


>gi|327401416|ref|YP_004342255.1| carbamoyl-phosphate synthase large subunit [Archaeoglobus veneficus
            SNP6]
 gi|327316924|gb|AEA47540.1| carbamoyl-phosphate synthase, large subunit [Archaeoglobus veneficus
            SNP6]
          Length = 1076

 Score = 1320 bits (3417), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 652/1089 (59%), Positives = 834/1089 (76%), Gaps = 22/1089 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KR D++KI+++G+GPIVIGQA EFDYSG+QACKAL+EEGYEV+L+NSNPATIMTDP +AD
Sbjct: 3    KREDIKKIMVIGSGPIVIGQAAEFDYSGSQACKALREEGYEVVLVNSNPATIMTDPEMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
            RTYI P+T ++V +++E+E PDALLPT+GGQTALN+AV L E G L+KYGVELIGAKLDA
Sbjct: 63   RTYIEPLTADVVARIIERETPDALLPTLGGQTALNIAVQLGEMGVLDKYGVELIGAKLDA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            IKKAEDR+LFK+ M  IG++ P S I N + E +SIA EIG +P+++RPAFTLGGTGGGI
Sbjct: 123  IKKAEDRELFKECMHRIGLEVPRSDIANDISEALSIAEEIG-YPVVVRPAFTLGGTGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EE + I   GL  S+ +QVL+E+ ++GWKE+ELEVMRDLADNVVIICSIEN DPMG
Sbjct: 182  AYNREELKEIAAHGLEMSMINQVLIEEGVIGWKEFELEVMRDLADNVVIICSIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTD EYQRLRD +I IIREIGVE GGSN+QFAV+P     + IEMN
Sbjct: 242  VHTGDSITVAPAQTLTDWEYQRLRDAAIDIIREIGVETGGSNIQFAVHPTTERFVAIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRF 447
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD+IPNDITK+TPASFEP+IDYVV KIPRF
Sbjct: 302  PRVSRSSALASKATGFPIAKIAAKLAVGYTLDEIPNDITKETPASFEPTIDYVVVKIPRF 361

Query: 448  AFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDWE 507
            AF+KFP ++P+L +QMKSVGE MA+GRTF+E+ QKALRSLE G  G G S+ K+ D   E
Sbjct: 362  AFDKFPTADPVLGSQMKSVGEVMAIGRTFEEALQKALRSLEIGRYGLG-SDGKDKDVTRE 420

Query: 508  QLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLL----T 563
            ++   LR PN  R+  I  A++KG  V+EI+E++ ID WF+ + K ++++E+ L      
Sbjct: 421  EIIRKLRYPNAQRVFYIRYALQKGFSVEEIYEITKIDPWFIEKIKNIVEMEKELKELASK 480

Query: 564  QSVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEA 623
             S+ ++  +   + K+ GFSD Q+A     +E E+R  R   G+   +K VDTCAAEFEA
Sbjct: 481  HSIDDVPPEILKKAKKLGFSDVQLAKIFGVSEVEIRRIRKRDGISAVFKMVDTCAAEFEA 540

Query: 624  NTPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMM 683
             TPY YS+Y+ E ++ PT+K KV+ILGGGPNRIGQGIEFDYCCCH  FSL+  GYETIM+
Sbjct: 541  KTPYYYSTYEEENDAKPTEKPKVMILGGGPNRIGQGIEFDYCCCHAVFSLKEEGYETIMV 600

Query: 684  NSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLD 743
            N+NPETVSTDYDTSDRLYFEP+T EDV+N+ + E+PEG+IVQFGGQTPL ++        
Sbjct: 601  NNNPETVSTDYDTSDRLYFEPITHEDVMNIYENEKPEGVIVQFGGQTPLNIA-------- 652

Query: 744  EHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAK 803
              +L S+      +I GTS DSID AEDRERF  +   L I QP+ GIA S  +A  IA 
Sbjct: 653  -KQLESSGA----KILGTSVDSIDIAEDRERFAELCNRLGIPQPENGIAHSIEEAKEIAA 707

Query: 804  EIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDA 863
             IGYPV+VRPSYVLGGRAMEIVY +ETL  Y+  A+EV PE+P+LIDK+L DAIE++VDA
Sbjct: 708  RIGYPVLVRPSYVLGGRAMEIVYDEETLERYISEALEVSPEKPILIDKFLEDAIEVEVDA 767

Query: 864  LADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGL 923
            L D    VVIGGIMEHIE+AGVHSGDSAC++P  ++S   +D I  +T K+A  LNV GL
Sbjct: 768  LCDG-EEVVIGGIMEHIEEAGVHSGDSACVLPPVSLSQDIIDRIVDYTRKMALELNVVGL 826

Query: 924  MNCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVI 983
            +N QYA+  +  VY+LEANPRASRTVPFVSKA G PLAK AA +M+GK L +LG  + + 
Sbjct: 827  INIQYAVKDN-IVYVLEANPRASRTVPFVSKATGIPLAKIAAKLMTGKKLKELGVKERLN 885

Query: 984  PKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGT 1043
             KHV+VKEAV PF K  G D +LGPEM+STGEVMGID  F +A+ KA++AAG +LP  GT
Sbjct: 886  LKHVAVKEAVFPFIKLPGVDPVLGPEMKSTGEVMGIDYDFGVAYYKAELAAGMRLPTEGT 945

Query: 1044 VFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDM 1103
            VF+S+    +  +  +AK   ++GFKI++T+GTA+FL   GI  E V K+ +GRP+  D+
Sbjct: 946  VFISVKKEDRERVLPVAKKLAELGFKIIATNGTANFLRANGIDAEIVNKVSQGRPNILDV 1005

Query: 1104 VANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTVT 1163
            + N Q+ +++ T SG    + +G  +RR  + + +P ITTVSGA+A  + I ++K+  +T
Sbjct: 1006 IINRQVDLIINTPSGKR-GKTEGYMIRRAAVDHNIPYITTVSGAIAAVKGIEAIKNAQMT 1064

Query: 1164 MTALQDFFD 1172
            + ++Q++ +
Sbjct: 1065 IKSIQEYHE 1073



 Score =  253 bits (645), Expect = 7e-64,   Method: Compositional matrix adjust.
 Identities = 151/405 (37%), Positives = 228/405 (56%), Gaps = 19/405 (4%)

Query: 79  ASSKDQKLGKRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPAT 138
           ++ +++   K T+  K++ILG GP  IGQ  EFDY    A  +LKEEGYE I++N+NP T
Sbjct: 547 STYEEENDAKPTEKPKVMILGGGPNRIGQGIEFDYCCCHAVFSLKEEGYETIMVNNNPET 606

Query: 139 IMTDPGLADRTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGV 198
           + TD   +DR Y  P+T E V  + E E+P+ ++   GGQT LN+A  L  SGA      
Sbjct: 607 VSTDYDTSDRLYFEPITHEDVMNIYENEKPEGVIVQFGGQTPLNIAKQLESSGA------ 660

Query: 199 ELIGAKLDAIKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAF 258
           +++G  +D+I  AEDR+ F +    +G+  P +GI ++++E   IA  IG +P+++RP++
Sbjct: 661 KILGTSVDSIDIAEDRERFAELCNRLGIPQPENGIAHSIEEAKEIAARIG-YPVLVRPSY 719

Query: 259 TLGGTGGGIAYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIIC 318
            LGG    I Y++E  E      L  S    +L++K L    E E++ + D  + VVI  
Sbjct: 720 VLGGRAMEIVYDEETLERYISEALEVSPEKPILIDKFLEDAIEVEVDALCD-GEEVVIGG 778

Query: 319 SIENVDPMGVHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVD 378
            +E+++  GVH+GDS  V P  +L+     R+ DY+  +  E+ V  G  N+Q+AV   D
Sbjct: 779 IMEHIEEAGVHSGDSACVLPPVSLSQDIIDRIVDYTRKMALELNV-VGLINIQYAVK--D 835

Query: 379 GEVMVIEMNPRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSID 438
             V V+E NPR SR+    SKATG P+AK+AAKL  G  L        K+       ++ 
Sbjct: 836 NIVYVLEANPRASRTVPFVSKATGIPLAKIAAKLMTGKKL--------KELGVKERLNLK 887

Query: 439 YVVTKIPRFAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKA 483
           +V  K   F F K PG +P+L  +MKS GE M +   F  ++ KA
Sbjct: 888 HVAVKEAVFPFIKLPGVDPVLGPEMKSTGEVMGIDYDFGVAYYKA 932


>gi|337285632|ref|YP_004625105.1| carbamoyl-phosphate synthase, large subunit [Thermodesulfatator
            indicus DSM 15286]
 gi|335358460|gb|AEH44141.1| carbamoyl-phosphate synthase, large subunit [Thermodesulfatator
            indicus DSM 15286]
          Length = 1085

 Score = 1320 bits (3415), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 651/1090 (59%), Positives = 829/1090 (76%), Gaps = 24/1090 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KR D++KILI+G+GPIVIGQACEFDYSGTQACKALKEEGYE++L+NSNPATIMTDP  A 
Sbjct: 3    KREDIKKILIIGSGPIVIGQACEFDYSGTQACKALKEEGYEIVLVNSNPATIMTDPETAH 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
            RTY+ P+TPE+V +++++ERPDALLPT+GGQTALN A  +A  G LEKYGVE+I A  + 
Sbjct: 63   RTYVEPITPEVVAEIIKEERPDALLPTLGGQTALNTAFEVARRGVLEKYGVEMIAASAEV 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I+KAEDR+ F++AMK IG+K P S I  T+ + +  A +IG +P+I+RPAFTLGGTGGG+
Sbjct: 123  IRKAEDREAFREAMKNIGLKVPRSEIVTTVKDALRAAEKIG-YPVIVRPAFTLGGTGGGV 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EE E I   GL  SL  QV++E+S+LGWKEYELEVMRD  DNVVIIC+IEN DPMG
Sbjct: 182  AYNREELEEIATRGLELSLIHQVMIEESVLGWKEYELEVMRDKNDNVVIICTIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAP+QTLTD+EYQR+R+ +IAI+REIGVE GGSNVQFA+NP +G+++VIEMN
Sbjct: 242  VHTGDSITVAPSQTLTDREYQRMRNAAIAIMREIGVETGGSNVQFAINPENGDMVVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRF 447
            PRVSRSSALASKATGFPIAK+AAKL++GY+LD+IPNDIT++T ASFEP+IDYVV K PRF
Sbjct: 302  PRVSRSSALASKATGFPIAKIAAKLAIGYTLDEIPNDITRETMASFEPTIDYVVVKFPRF 361

Query: 448  AFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWD-- 505
             FEKFP +   LTT MKSVGE MA+GRTF+E+ QKA+R LE G +G G       D    
Sbjct: 362  TFEKFPETPDELTTSMKSVGETMAIGRTFKEALQKAIRGLEIGRAGLGADGKSPSDRGET 421

Query: 506  --WEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLT 563
               + +   LR+PN +R+  I  A K G    EI+EL+ ID WFL Q + +I+ E  +  
Sbjct: 422  VPHKLIVEKLRIPNSERIFYIREAYKAGFSTQEIYELTHIDPWFLEQMRAIIEKEDEVKE 481

Query: 564  QSVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEA 623
               S    +  +EVKR GFSDKQIAF T  TE+EV ++R  +G+ P YK VDTCAAEFEA
Sbjct: 482  AGDSLFEPEKIFEVKRFGFSDKQIAFLTGKTEEEVAKRRKEVGIRPVYKLVDTCAAEFEA 541

Query: 624  NTPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMM 683
             TPY YSSY+ E E+  ++K+KV+ILGGGPNRIGQGIEFDYCC H SF L+  G E+IM+
Sbjct: 542  YTPYYYSSYEVENEARTSKKQKVMILGGGPNRIGQGIEFDYCCVHASFGLRELGIESIMV 601

Query: 684  NSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLD 743
            NSNPETVSTDYDTSDRLYFEPLT+EDVL++ + E  EG+IVQFGGQTPL L++P+ +   
Sbjct: 602  NSNPETVSTDYDTSDRLYFEPLTLEDVLHIYEQENSEGVIVQFGGQTPLNLAVPLEK--- 658

Query: 744  EHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAK 803
                        V+I GTSPDSID AEDRERF  ++ +L +++P  G A +  +A+ IA+
Sbjct: 659  ----------AGVKILGTSPDSIDRAEDRERFTELLDKLGLKKPPAGTAFTIEEAVEIAR 708

Query: 804  EIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDA 863
            +IGYPV+VRPSYVLGGRAM+IV+ +E+L  Y+  A +V+PE PVLIDK+L  AIE+DVDA
Sbjct: 709  KIGYPVLVRPSYVLGGRAMQIVWDEESLKNYMATAAKVNPEHPVLIDKFLEHAIEVDVDA 768

Query: 864  LADSCGNV-VIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCG 922
            ++D  G + V+GGIMEHIE+AG+HSGDSAC++P  +I  + L+ I + T  LA+ LNV G
Sbjct: 769  ISD--GEITVVGGIMEHIEEAGIHSGDSACVLPPISIPRNILEDIKAATKALARELNVIG 826

Query: 923  LMNCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEV 982
            LMN Q+AI  + ++++LE NPRASRT+PFVSKAIG PLA+ A  VM GKSL ++GFTKE+
Sbjct: 827  LMNIQFAIKDN-ELFVLEVNPRASRTIPFVSKAIGVPLARLATWVMMGKSLKEIGFTKEI 885

Query: 983  IPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSG 1042
             PKH+SVKEAV PF +F G DV+LGPEM+STGEVMGID  F +A+AKAQ+AAG  LPL G
Sbjct: 886  EPKHISVKEAVFPFRRFPGVDVMLGPEMKSTGEVMGIDFDFGMAYAKAQLAAGMNLPLEG 945

Query: 1043 TVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEG-RPHAG 1101
            TVF+S+ D  +P +  IAKA  ++GFKIV+T GTA  L   G+ VE + K+ E  RP+A 
Sbjct: 946  TVFISVKDPDQPLVVPIAKALAELGFKIVATRGTAAVLREAGLEVEVIPKISEKVRPNAL 1005

Query: 1102 DMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNT 1161
            D + NG+  +++ T+ G    + D   +RR  +   VP  TT+S A A  EAIR LK + 
Sbjct: 1006 DKLKNGEFALVINTAYGKESRE-DAYLIRRYAMELDVPYATTLSCAKAMVEAIRRLKESR 1064

Query: 1162 VTMTALQDFF 1171
            + + ALQD++
Sbjct: 1065 LEVRALQDYY 1074


>gi|153004934|ref|YP_001379259.1| carbamoyl phosphate synthase large subunit [Anaeromyxobacter sp.
            Fw109-5]
 gi|152028507|gb|ABS26275.1| carbamoyl-phosphate synthase, large subunit [Anaeromyxobacter sp.
            Fw109-5]
          Length = 1083

 Score = 1313 bits (3398), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 644/1094 (58%), Positives = 824/1094 (75%), Gaps = 33/1094 (3%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            +RTD+RKI+I+G+GPIVIGQACEFDYSGTQACKALKEEGYE++L+NSNPATIMTDPG AD
Sbjct: 3    RRTDIRKIMIVGSGPIVIGQACEFDYSGTQACKALKEEGYEIVLLNSNPATIMTDPGFAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
            RTY+ P+TP + EQ+L +E+PD LLPT+GGQTALNLAVALA++GAL ++GVELIGA+L+A
Sbjct: 63   RTYVEPITPAVAEQILAREKPDVLLPTLGGQTALNLAVALAKNGALARHGVELIGAQLEA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I+KAEDR LFK AM+ +GV+ P SG   + +E  +IA +IG FP+IIRP+FT+GG GGG+
Sbjct: 123  IEKAEDRLLFKAAMERVGVELPKSGYATSWEEARAIAEDIG-FPIIIRPSFTMGGEGGGV 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEFE + +  L  S T  +L E+S++GWKEYELEVMRD  DNVVIICSIEN DPMG
Sbjct: 182  AYNREEFEPLARRALTLSPTHTILCEESIIGWKEYELEVMRDRNDNVVIICSIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQR+RD  I IIREIGVE GGSN+QF V+P  G ++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQRMRDAGIRIIREIGVETGGSNIQFGVHPRTGRMVVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRF 447
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT+ TPASFEP+IDYVVTK+PRF
Sbjct: 302  PRVSRSSALASKATGFPIAKIAAKLAVGYTLDELKNDITRYTPASFEPTIDYVVTKVPRF 361

Query: 448  AFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLE---CGFSG-----WGCSNV 499
            AFEKF G+   LTTQMKSVGE MA+GRTFQES QKA+R LE   CG         G +  
Sbjct: 362  AFEKFKGANDTLTTQMKSVGEVMAIGRTFQESLQKAIRGLEIDRCGLESPLGKRPGDAYA 421

Query: 500  KELDWDWEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQ 559
             E   + E++K  +RVP   R+  +  A++ G+ VD++H L++ID WFL + +EL+  E+
Sbjct: 422  SE---ELERIKAEVRVPRDRRVFWVAEALRAGLSVDDVHALTYIDPWFLREMEELVHAEE 478

Query: 560  FLLTQSVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAA 619
              L + V     +    VKR GFSDK+IA    +TEK VRE R   GV P +KRVDTCAA
Sbjct: 479  -ALAKGVPQ-GAEPLRAVKRMGFSDKRIAQLAGTTEKAVREARWQAGVRPVFKRVDTCAA 536

Query: 620  EFEANTPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYE 679
            EFEA TPY+YS+Y+ ECE+ PT ++KV+ILGGGPNRIGQGIEFDYCC H SF+L  AGYE
Sbjct: 537  EFEAYTPYLYSTYEEECEATPTDRRKVMILGGGPNRIGQGIEFDYCCVHASFALSRAGYE 596

Query: 680  TIMMNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIH 739
            TIM+N NPETVSTDYDTSDRLYFEP+T+EDVL ++ +E+PEG+IVQ+GGQTPLKL++P+H
Sbjct: 597  TIMVNCNPETVSTDYDTSDRLYFEPVTLEDVLEIVHVEKPEGLIVQYGGQTPLKLAVPLH 656

Query: 740  QYLDEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADAL 799
            +               V I+GT+PD+ID AEDRERF A+I++L + QP+ G+A+S  +A 
Sbjct: 657  EL-------------GVPIFGTTPDAIDRAEDRERFAALIEKLGLRQPQNGVARSADEAF 703

Query: 800  AIAKEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEI 859
            A+A+ IGYPV+VRPSYVLGGRAME+VY D+ L TYL  AV+   ERPVL+D++L DA E+
Sbjct: 704  AVARRIGYPVMVRPSYVLGGRAMEVVYDDKDLDTYLREAVQASNERPVLVDRFLRDAAEV 763

Query: 860  DVDALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLN 919
            DVD ++D   +VV+GG+MEHIE+AG+HSGDSAC +P  +++   +  I   +I LAK L 
Sbjct: 764  DVDVVSDG-EDVVVGGVMEHIEEAGIHSGDSACALPPFSLAPERVAEIEQQSIALAKELG 822

Query: 920  VCGLMNCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFT 979
            V GLMN Q+AI  + DVY+LE NPRASRTVPFV KA G PLAK  +L M GKSL + G  
Sbjct: 823  VVGLMNVQFAIQGN-DVYVLEVNPRASRTVPFVGKATGLPLAKAGSLCMVGKSLEEAGAL 881

Query: 980  KEVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLP 1039
             +    H+SVKEAV PF +F G D +LGPEMRSTGEVMGID  F  AF KAQ AAG  LP
Sbjct: 882  VDGRRGHISVKEAVFPFARFPGVDTMLGPEMRSTGEVMGIDQDFYRAFFKAQTAAGNTLP 941

Query: 1040 LSGT---VFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEG 1096
             SG     F+S+ D  KP +  +A+  + +GF++++T+GT+ +L  +G+    VLK+HEG
Sbjct: 942  ASGAGRRAFVSVKDSDKPAIAELARRLVALGFEVLATAGTSAYLGARGVPTTLVLKVHEG 1001

Query: 1097 RPHAGDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRS 1156
            RP   D + +G + ++  T++G   +  D   +RR  L   +P  TT++GA A   A+ +
Sbjct: 1002 RPSVVDRIKDGDVHLVFNTTAGKQ-EIADSYSIRRETLMKGLPYFTTLTGARAAVGAMEA 1060

Query: 1157 LKSNTVTMTALQDF 1170
                  ++ ++Q++
Sbjct: 1061 AHGGAPSVRSIQEY 1074


>gi|317050357|ref|YP_004111473.1| carbamoyl-phosphate synthase large subunit [Desulfurispirillum
            indicum S5]
 gi|316945441|gb|ADU64917.1| carbamoyl-phosphate synthase, large subunit [Desulfurispirillum
            indicum S5]
          Length = 1087

 Score = 1308 bits (3386), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 642/1090 (58%), Positives = 825/1090 (75%), Gaps = 23/1090 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++KIL++G+GPIVIGQACEFDYSGTQA KALKEEGYEV+LINSNPATIMTD  +AD
Sbjct: 3    KRTDIKKILVIGSGPIVIGQACEFDYSGTQAIKALKEEGYEVVLINSNPATIMTDAQMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+T  ++E+++EKERP A+LPT+GGQTALN AV +AE+G L+KY VE+IGA L A
Sbjct: 63   ATYIEPITASVIEKIIEKERPCAILPTVGGQTALNAAVEVAETGILKKYNVEMIGANLKA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I+K EDR+LFK+AM  IG++ P  G  ++L+E   I  E+G  P IIRP+FTLGG+GGGI
Sbjct: 123  IQKGEDRELFKEAMNRIGLEMPRCGYAHSLEEARKIVREMG-LPAIIRPSFTLGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN EEF+ I  +GL AS + ++L+++S++GWKEYE+EVMRD  DNVVIICSIEN DPMG
Sbjct: 182  AYNMEEFDEIVASGLDASPSREILIDESIIGWKEYEMEVMRDKNDNVVIICSIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTL+DKEYQ +RD +I +IREIGV+ GGSNVQFAVNP DG +++IEMN
Sbjct: 242  VHTGDSITVAPAQTLSDKEYQLMRDATIKVIREIGVDTGGSNVQFAVNPDDGRLVIIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRF 447
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD+IPNDITK+TPASFEP+IDYVV K PRF
Sbjct: 302  PRVSRSSALASKATGFPIAKIAAKLAVGYTLDEIPNDITKETPASFEPTIDYVVVKYPRF 361

Query: 448  AFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGC----SNVKELD 503
             FEKFP +   LTTQMKSVGEAM++GRTF+ESFQK LRSLE    G+        +K+ +
Sbjct: 362  TFEKFPNANATLTTQMKSVGEAMSIGRTFKESFQKVLRSLEIDSYGFESRLSEEQIKKPN 421

Query: 504  WDWEQL-KYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDV-EQFL 561
             D   L +  LR+PN +R+  I  A + G  ++ IH+++ ID WFL + ++++++ E+  
Sbjct: 422  SDTIALIENKLRIPNWERVWYIGDAFRIGFTIERIHQITNIDPWFLEELRQIVEMDERIA 481

Query: 562  LTQSVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEF 621
               S  ++  D   ++K  GFSD++IA  T + E+ +   R   GV+P +KR+DTC AEF
Sbjct: 482  HLGSYRDLNTDLLRQIKEMGFSDRRIAQLTSTDEQSIERLRKDQGVVPVFKRIDTCGAEF 541

Query: 622  EANTPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETI 681
            EA TPY+YS+Y+ ECE+APT +KK++I+GGGPNRIGQGIEFDYCCCH +F+L   G+ETI
Sbjct: 542  EAQTPYLYSTYEEECEAAPTDRKKIMIIGGGPNRIGQGIEFDYCCCHAAFALSEDGFETI 601

Query: 682  MMNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQY 741
            M+N NPETVSTDYDTSDRLYFEP+T ED+L++++ E+P G+I+QFGGQTPLKL++     
Sbjct: 602  MVNCNPETVSTDYDTSDRLYFEPVTREDILSIVEKEKPHGLIIQFGGQTPLKLAVA---- 657

Query: 742  LDEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAI 801
            L++  +P         I GTSPD+ID AEDRERF  ++++L ++QP    A SEA AL I
Sbjct: 658  LEKANVP---------ILGTSPDAIDRAEDRERFKKLVEKLELKQPANATATSEAQALEI 708

Query: 802  AKEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDV 861
            A+ IGYPVVVRPSYVLGGRAMEIVY  + L  Y+E AV+  PE PVLID +L  A E+DV
Sbjct: 709  AERIGYPVVVRPSYVLGGRAMEIVYNVDALKNYMEKAVKASPEHPVLIDHFLEHATEVDV 768

Query: 862  DALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVC 921
            DA+ D   NV++ GIMEHIE+AG+HSGDSAC +P K++S+   + I   T  LA  L V 
Sbjct: 769  DAVCDG-ENVIVAGIMEHIEEAGIHSGDSACSLPPKSLSAEICEEIRRQTRLLALELKVV 827

Query: 922  GLMNCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKE 981
            GLMN Q+AI   G++YL+E NPRASRTVPFVSKA G P AK AALVM+G+ L +LG T++
Sbjct: 828  GLMNIQFAI-KGGEIYLIEVNPRASRTVPFVSKATGIPFAKIAALVMAGRKLPELGLTRD 886

Query: 982  VIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLS 1041
            V P++ SVKE+V PF KF G D +LGPEMRSTGEVMGID  F IAFAKAQ  AG  LPL 
Sbjct: 887  VEPEYFSVKESVFPFIKFPGVDTILGPEMRSTGEVMGIDPEFGIAFAKAQSGAGGTLPLK 946

Query: 1042 GTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAG 1101
            GTVF+S+ +  K H+  IA+  + +GFK+V+T GTA +L+ KGI    V K++EGRP+  
Sbjct: 947  GTVFISVRNEDKEHIPDIARKLIALGFKVVATRGTAAYLKSKGIEATPVHKVNEGRPNIV 1006

Query: 1102 DMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNT 1161
            D++ NG I ++  T  G+   + D L +RR  L YKVP  TTV GA A   AI + K++ 
Sbjct: 1007 DLIVNGSIALVFNTPGGEKT-KADALSIRRSVLTYKVPYFTTVEGAKAAVTAIEAEKNDQ 1065

Query: 1162 VTMTALQDFF 1171
            + +  LQ+ +
Sbjct: 1066 LHVKPLQEHY 1075


>gi|313672969|ref|YP_004051080.1| carbamoyl-phosphate synthase large subunit [Calditerrivibrio
            nitroreducens DSM 19672]
 gi|312939725|gb|ADR18917.1| carbamoyl-phosphate synthase large subunit [Calditerrivibrio
            nitroreducens DSM 19672]
          Length = 1077

 Score = 1304 bits (3375), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 657/1089 (60%), Positives = 815/1089 (74%), Gaps = 22/1089 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD+ KI+I+G+GPIVIGQACEFDYSGTQA KALKEEGY+V+LINSNPATIMTDP  AD
Sbjct: 3    KRTDIDKIMIIGSGPIVIGQACEFDYSGTQALKALKEEGYKVVLINSNPATIMTDPEFAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+T E  E+++EKERPDA+LPT+GGQTALNLA+ L + G L++Y VELIGAK+DA
Sbjct: 63   ATYIEPLTVECAEKIIEKERPDAILPTVGGQTALNLALDLHKHGVLDRYNVELIGAKVDA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            IKKAEDR+LFK AM  IG++ P S    + +E +     IG FP IIRP+FTLGGTGG +
Sbjct: 123  IKKAEDRELFKAAMYKIGLEMPKSAYVKSFEEGMDAIVNIG-FPAIIRPSFTLGGTGGNV 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN EE++   + GL AS   +VLVE+S+LGWKEYELEVMRDL DNVVIICSIEN DPMG
Sbjct: 182  AYNMEEYKRYLEWGLEASPVGEVLVEESILGWKEYELEVMRDLKDNVVIICSIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ +RD +I I+REIGV+ GGSNVQFA +P  G  +VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQYMRDAAIKIMREIGVDTGGSNVQFATDPKTGRQVVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRF 447
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD+IPNDITKKTPASFEP+IDY V K PRF
Sbjct: 302  PRVSRSSALASKATGFPIAKIAAKLAVGYTLDEIPNDITKKTPASFEPTIDYCVVKFPRF 361

Query: 448  AFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWD-- 505
             FEKFPG++  LTTQMKSVGE MA+GRTF+ES QKA+ SLE G +G+     K  D+D  
Sbjct: 362  TFEKFPGTDDTLTTQMKSVGEVMAIGRTFKESLQKAINSLEIGKTGFDEIFDKN-DYDKP 420

Query: 506  --WEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLT 563
               +++   L+ P   RM  I  A + GM +DEI+  S ID+WFL   K++ID+E+ +  
Sbjct: 421  EVIDEIISYLKRPTDKRMWYIGEAFRAGMSIDEIYNYSCIDRWFLNNIKQIIDMEEEIKR 480

Query: 564  QSVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEA 623
            + +  +T ++  + K  GFSDK++A     TE ++  KR SL VIP YKRVDTCAAEFE+
Sbjct: 481  KKIDTLTPEELRKYKEYGFSDKRLAKLMNCTEDDIAFKRRSLDVIPVYKRVDTCAAEFES 540

Query: 624  NTPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMM 683
             TPY+YS+Y+ ECE+  T++KKV+ILGGGPNRIGQGIEFDYCC H  ++L   GYETIM+
Sbjct: 541  FTPYLYSTYEKECEAGVTERKKVVILGGGPNRIGQGIEFDYCCVHACYALSEIGYETIMI 600

Query: 684  NSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLD 743
            N NPETVSTDYDTSDRLYFEPLT E VLN+ID E+P G+IVQFGGQTPLKLS+P+ +   
Sbjct: 601  NCNPETVSTDYDTSDRLYFEPLTKEHVLNIIDKEKPVGVIVQFGGQTPLKLSVPLEK--- 657

Query: 744  EHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAK 803
                        VRI GTSPDSID AEDRERF  ++++L I QP  GIA++  +A  IA+
Sbjct: 658  ----------AGVRILGTSPDSIDIAEDRERFKKLVEKLGILQPNNGIARNPEEAFKIAE 707

Query: 804  EIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDA 863
            EIGYPVVVRPSYVLGGRAMEIVY  E L  Y++ AVE   + PVLIDK+L +AIE+DVDA
Sbjct: 708  EIGYPVVVRPSYVLGGRAMEIVYDSEALANYMKFAVEASEKHPVLIDKFLDNAIELDVDA 767

Query: 864  LADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGL 923
            ++D    VV+ GIM+HIE+AG+HSGDSAC IP +TIS      +   T +LA  L V GL
Sbjct: 768  ISDG-ETVVVAGIMQHIEEAGIHSGDSACSIPPRTISEDIKIKVIKITKQLAYELKVLGL 826

Query: 924  MNCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVI 983
            MN Q+AI  + D+Y+LE NPRASRTVPFVSK IG PLAK AA VM G+ L DLGFT EV 
Sbjct: 827  MNIQFAIKDN-DIYILEVNPRASRTVPFVSKTIGVPLAKLAAKVMVGQKLKDLGFTNEVD 885

Query: 984  PKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGT 1043
                +VKEAV PF KF G D +LGPEM+STGEVMGID++F  A+ KAQ+AAG KLP SG 
Sbjct: 886  IPFFTVKEAVFPFVKFPGTDPILGPEMKSTGEVMGIDVTFGKAYYKAQMAAGNKLPKSGK 945

Query: 1044 VFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDM 1103
            VF+S+ D  K  +  IAK F  +GF IV+T+GT + L+  GI VE V K+ +GRP+  D+
Sbjct: 946  VFISVKDSVKKDIIPIAKEFDRLGFNIVATAGTYNLLKENGINVEFVKKVQDGRPNIVDL 1005

Query: 1104 VANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTVT 1163
            + N +I+ ++    G    ++D   +RR  L+Y VP +TT+  A A+   I+   +  + 
Sbjct: 1006 IKNREIKFVINIPHGKK-SRLDSTSIRRAILSYNVPYVTTIEAAEASILGIKDYFNENLN 1064

Query: 1164 MTALQDFFD 1172
            +T+LQ++++
Sbjct: 1065 VTSLQNYYN 1073


>gi|325294322|ref|YP_004280836.1| carbamoyl-phosphate synthase large subunit [Desulfurobacterium
            thermolithotrophum DSM 11699]
 gi|325064770|gb|ADY72777.1| carbamoyl-phosphate synthase, large subunit [Desulfurobacterium
            thermolithotrophum DSM 11699]
          Length = 1071

 Score = 1304 bits (3375), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 664/1090 (60%), Positives = 829/1090 (76%), Gaps = 28/1090 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTDL+KILI+G+GPIVIGQA EFDYSGTQACKALKEEGY+V+L+NSNPATIMTDP +AD
Sbjct: 3    KRTDLKKILIIGSGPIVIGQAAEFDYSGTQACKALKEEGYQVVLVNSNPATIMTDPDIAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
            RTYI P+T E++E+++EKERPDALLPT+GGQTALNLAV L E+G LEKYGVELIGAK++A
Sbjct: 63   RTYIEPLTVEVLEKIIEKERPDALLPTVGGQTALNLAVELYEAGILEKYGVELIGAKIEA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            IKKAEDR+LFK+AM  IG++ P SG+  +LDE + +  E+G  P IIRPAFTLGG GGG+
Sbjct: 123  IKKAEDRELFKEAMLKIGLEVPKSGLARSLDEAMEVVKEVG-LPAIIRPAFTLGGEGGGV 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN EEF+ I K GL AS  +++L+E+S+LGWKEYELEVMRDL DNVVIICSIEN+DPMG
Sbjct: 182  AYNIEEFKEIAKRGLDASPINEILIEESVLGWKEYELEVMRDLNDNVVIICSIENIDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ LRD +IAIIREIGVE GGSNVQFAVNP +G V+VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQVLRDAAIAIIREIGVETGGSNVQFAVNPENGRVIVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRF 447
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++PNDITKKTPASFEP+IDY V K PR+
Sbjct: 302  PRVSRSSALASKATGFPIAKIAAKLAVGYTLDELPNDITKKTPASFEPAIDYCVVKFPRW 361

Query: 448  AFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKEL-DWDW 506
            AFEKFP +   LTT+MKSVGE MA+GRTF+E+  KA+RSLE G  G     V +L D D 
Sbjct: 362  AFEKFPEANSTLTTRMKSVGEVMAIGRTFKEALLKAIRSLEIGRYGLLMKGVDKLSDQDL 421

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
            E     + VPN DR+  I  A+++G  +D+++ELS IDKWFL   K+L+D+E  +   S+
Sbjct: 422  ES---KIAVPNADRIWYIAEALRRGWSLDKLYELSKIDKWFLHNIKQLVDLENEIKKYSL 478

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
              +    F   K+ GFSDK IA     +EKEVREKR  +  +  YK VDTCA EFEA TP
Sbjct: 479  DTIPPILFKFAKKWGFSDKYIADLVGVSEKEVREKRKQVAQV-LYKTVDTCAGEFEAYTP 537

Query: 627  YMYSSYD-FECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNS 685
            Y YS+YD  ECE+ P+ KKKV + G GPNRIGQG+EFDYCC H  ++L+  GYE  M N 
Sbjct: 538  YYYSTYDGRECEANPSDKKKVTVFGSGPNRIGQGVEFDYCCVHAVWALRELGYEAHMANC 597

Query: 686  NPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEH 745
            NPETVSTDYDTSD+L+FEPLT+ED LN+++ E+PEG+IVQFGGQTPLKLS+P+ +     
Sbjct: 598  NPETVSTDYDTSDKLFFEPLTLEDALNIVEKEKPEGVIVQFGGQTPLKLSVPLEK----- 652

Query: 746  RLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEI 805
                   +G V+I GTS +SID AEDRERF  ++ +L ++QP  GIA+S  +A  IA+EI
Sbjct: 653  -------EG-VKILGTSSESIDIAEDRERFRTLLNKLGLKQPPSGIARSLEEAEKIAEEI 704

Query: 806  GYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALA 865
            G+PV++RPSYVLGGRAM IVY    L TY+  AVEV  +RPVLIDK+L DA+E DVDA+ 
Sbjct: 705  GFPVLMRPSYVLGGRAMRIVYDINELRTYMTEAVEVSEDRPVLIDKFLEDAVEFDVDAVC 764

Query: 866  DSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMN 925
            D    VVIGG+MEHIE+AG+HSGDSAC++PT ++    ++ I   T K+A  LNV GL+N
Sbjct: 765  DG-KRVVIGGVMEHIEEAGIHSGDSACVLPTFSVPKEIVEEIKEITRKIALELNVKGLIN 823

Query: 926  CQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPK 985
             Q+A+   G++Y++E NPRASRTVPFVSKA G PLAK A  V  GK+L++LG  +EV P+
Sbjct: 824  IQFAV-KDGEIYIIEVNPRASRTVPFVSKATGIPLAKVATKVAIGKTLDELGI-EEVEPR 881

Query: 986  HVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLS---G 1042
            + SVKEAV PF +F   D +L PEM+STGEVMGID    IAF KAQ+AAG +LP+    G
Sbjct: 882  YYSVKEAVFPFNRFPEVDPVLSPEMKSTGEVMGIDDDLGIAFYKAQLAAGSRLPVDTSRG 941

Query: 1043 TVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEG-RPHAG 1101
             VF+S+ D  KP +  IAK   D+GFKIVST GT  FL+ KG+ VE V K+ EG RP+ G
Sbjct: 942  KVFISVKDKDKPKVYGIAKKLTDMGFKIVSTEGTYKFLKEKGLPVEVVFKIQEGRRPNVG 1001

Query: 1102 DMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNT 1161
            D++ NG+I +++ T SG    + D + +RR  + Y +P  TT+ GA A   AI S++   
Sbjct: 1002 DLIKNGEIILIINTPSGTRSTK-DAVSIRRLAVNYNIPYYTTIRGAQAAVMAIESMRKRQ 1060

Query: 1162 VTMTALQDFF 1171
            + +  LQ+++
Sbjct: 1061 LEVKPLQEYY 1070


>gi|301058692|ref|ZP_07199693.1| carbamoyl-phosphate synthase, large subunit [delta proteobacterium
            NaphS2]
 gi|300447256|gb|EFK11020.1| carbamoyl-phosphate synthase, large subunit [delta proteobacterium
            NaphS2]
          Length = 1078

 Score = 1304 bits (3374), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 649/1092 (59%), Positives = 821/1092 (75%), Gaps = 24/1092 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++KILI+G+GPIVIGQACEFDYSGTQACKAL EEG+E++LINSNPATIMTDPG A 
Sbjct: 3    KRTDIQKILIIGSGPIVIGQACEFDYSGTQACKALMEEGFEIVLINSNPATIMTDPGTAH 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
            RTYI P+T E V +++E+ERP A+LPT+GGQT LN AV +AESG LEK GVE++GA L  
Sbjct: 63   RTYIEPITAEAVSRIIERERPQAILPTLGGQTGLNTAVEVAESGILEKLGVEMLGASLPV 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I+KAEDR+ F+ AMK IG+K P + I   +DE    A +IG +P+IIR ++TLGG G G+
Sbjct: 123  IQKAEDREQFRNAMKKIGLKVPDNFIARNMDEARYAAEQIG-YPIIIRASYTLGGIGSGV 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN++E E I KAGL AS+ S+V++E+SLLGWKEYELEVMRD  DNVVIICSIEN DPMG
Sbjct: 182  AYNRDEMEEIAKAGLDASMISEVIMERSLLGWKEYELEVMRDFKDNVVIICSIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTL+D EYQ +RD S+AIIREIGVE GGSN+QFAV+P  GE++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLSDYEYQIMRDASLAIIREIGVETGGSNIQFAVHPDTGEMVVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRF 447
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD+IPNDIT++T ASFEP+IDY V K+PR+
Sbjct: 302  PRVSRSSALASKATGFPIAKIAAKLAVGYTLDEIPNDITRETLASFEPTIDYCVVKVPRW 361

Query: 448  AFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKEL--DWD 505
             FEKFPG+  LLTT MKSVGE MA+GRTF+ES QKA+RSLE G  G G    + +    D
Sbjct: 362  TFEKFPGTRDLLTTSMKSVGETMAIGRTFKESLQKAVRSLEIGRYGLGTDTPECVLSKTD 421

Query: 506  WEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQS 565
            ++ L+  +  PN +R+  +Y A  +GM +++++ELS ID WFL   +++   E  L   +
Sbjct: 422  FDDLEQGIIHPNSNRLFYLYEAFNRGMTIEKLYELSKIDPWFLFHIQQIQFFENRLRQMA 481

Query: 566  -----VSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAE 620
                   +  +D   EVK  GFSD Q+A    +TE+ +R  R   GV P YK VDTCAAE
Sbjct: 482  HEGNPPGHWDEDFLKEVKEYGFSDIQLAGIFGTTEEAIRLVRKQKGVAPVYKLVDTCAAE 541

Query: 621  FEANTPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYET 680
            FEA TPY YS+Y+ E E   +Q +KV+ILGGGPNRIGQGIEFDYCC H S +L+  G E+
Sbjct: 542  FEAYTPYYYSTYEQENEIRSSQNRKVVILGGGPNRIGQGIEFDYCCVHASLALREMGIES 601

Query: 681  IMMNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQ 740
            IM+NSNPETVSTDYDTSDRLYFEPLT EDVL++++ E PEGIIVQFGGQTPL LS+P+ +
Sbjct: 602  IMVNSNPETVSTDYDTSDRLYFEPLTREDVLHIVEQENPEGIIVQFGGQTPLNLSVPLAE 661

Query: 741  YLDEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALA 800
                      +G   V+I GTSPDSID AEDRERF  ++K+L I QP+ GIA ++  A+ 
Sbjct: 662  ----------TG---VKILGTSPDSIDQAEDRERFQVMLKKLGILQPENGIAVNQRQAIH 708

Query: 801  IAKEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEID 860
            IA  IGYPVVVRPS+VLGGRAMEIVY  + L  Y+E AV+V P +PVLID++L  A+EID
Sbjct: 709  IADRIGYPVVVRPSFVLGGRAMEIVYDQKDLEYYMETAVQVSPGKPVLIDRFLDGAVEID 768

Query: 861  VDALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNV 920
            VDA++D     VIGGIMEHIE+AG+HSGDSAC++P  ++    L+TI   T  LA+ L+V
Sbjct: 769  VDAISDGQ-TTVIGGIMEHIEEAGIHSGDSACVLPPVSLEPDILETIMEHTRALARELSV 827

Query: 921  CGLMNCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTK 980
             GLMN QYA+  +G +Y++E NPRASRTVPFVSKA G PLAK A  V+ GK+L +LG T+
Sbjct: 828  VGLMNIQYAV-KAGIIYVIEVNPRASRTVPFVSKATGVPLAKMATQVIMGKTLQELGLTR 886

Query: 981  EVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPL 1040
            EV+P +VSVKEAV PF +F G D +LGPEM+STGEVMGID +F +AF K+Q+AAGQK+PL
Sbjct: 887  EVVPGYVSVKEAVFPFSRFPGVDTILGPEMKSTGEVMGIDRTFGLAFGKSQLAAGQKIPL 946

Query: 1041 SGTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHA 1100
            SGTVF+S+ D+ K  +  +A    D+GFKIV+T GT+ FL  KG+  E + K+ +GRPH 
Sbjct: 947  SGTVFISVKDVDKAAVLPVAAGLFDLGFKIVATKGTSRFLTEKGVINEPINKVRQGRPHV 1006

Query: 1101 GDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSN 1160
             DM+ NG+I  +VI ++ D     +   +RR  L   VP  TT++GA A   AIRS+   
Sbjct: 1007 VDMIKNGEIH-LVINTTSDKKAIGESYSIRRASLTLNVPYTTTLAGAKATLAAIRSMSRE 1065

Query: 1161 TVTMTALQDFFD 1172
             + +  +Q++ +
Sbjct: 1066 EMKVRTVQEYHN 1077


>gi|444913890|ref|ZP_21234036.1| Carbamoyl-phosphate synthase large chain [Cystobacter fuscus DSM
            2262]
 gi|444715188|gb|ELW56059.1| Carbamoyl-phosphate synthase large chain [Cystobacter fuscus DSM
            2262]
          Length = 1075

 Score = 1301 bits (3366), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 639/1091 (58%), Positives = 815/1091 (74%), Gaps = 22/1091 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KR D+RK+L++G+GPIVIGQACEFDYSGTQA KAL+EEG EV+L+NSNPAT+MTDP  A 
Sbjct: 3    KRNDIRKVLVIGSGPIVIGQACEFDYSGTQAIKALREEGVEVVLLNSNPATVMTDPEFAH 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
            RTYI P+T E+ E++L +ERPD++LPTMGGQTALNLA ALAE G LEKYGV LIGA L+A
Sbjct: 63   RTYIEPITVEVAERILAQERPDSVLPTMGGQTALNLAKALAEQGILEKYGVRLIGASLEA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR LFK AM+ IGV  P SG    + E +++ +E+G FP IIRP+FTLGGTGGGI
Sbjct: 123  INKAEDRQLFKAAMQKIGVALPKSGYATNMQEALALIDEVG-FPTIIRPSFTLGGTGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEFEAIC++GL AS  S +LVE+S+LGWKEYELEV+RD ADNV+IICSIEN+DPMG
Sbjct: 182  AYNREEFEAICRSGLKASPNSTILVEESVLGWKEYELEVVRDSADNVIIICSIENLDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTD+EYQRLR+ S+ IIREIGV+ GGSN+QF VNP DG ++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDREYQRLREASLRIIREIGVDTGGSNIQFGVNPRDGRIVVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRF 447
            PRVSRSSALASKATG+PIAK+AAKL++GY+LD++ NDIT+ TPASFEP++DYVV K+PRF
Sbjct: 302  PRVSRSSALASKATGYPIAKVAAKLALGYTLDELRNDITRDTPASFEPTLDYVVVKVPRF 361

Query: 448  AFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNV-KELDWDW 506
             FEKFP ++  LTT M++VGE MA+GRTF+E++ KA+RS+E G +G     +  E +   
Sbjct: 362  NFEKFPHADRTLTTSMRAVGEVMAMGRTFREAYLKAMRSMESGRTGLEAPELPTEKEERR 421

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELI-DVEQFLLTQS 565
            + L+  +RVP P+R   +  A ++G+ V+++HELS ID WFL   + L+ + E       
Sbjct: 422  KVLRDYVRVPRPERPIYVAQAFREGLSVEDVHELSAIDPWFLRHIQGLVREAESIQALGG 481

Query: 566  VSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANT 625
            +  +  D     K  G SDK +A     TE EVR +R + G+ P YKRVDTCAAEFEA T
Sbjct: 482  LDKLPDDTLRAAKADGLSDKYLAQLLGCTEAEVRARRHAKGIRPVYKRVDTCAAEFEAYT 541

Query: 626  PYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNS 685
            PY+YS+Y+ E E+ PT ++KVLILG GP RIGQGIEFDYCC H +F+L+SAGYET+M+N 
Sbjct: 542  PYLYSTYEEEDEAPPTARQKVLILGSGPIRIGQGIEFDYCCVHAAFALRSAGYETVMVNC 601

Query: 686  NPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEH 745
            NPETVSTDYDTSDRLYFEPLT+EDVL V   E+P G IVQFGGQTPL+LS+P    L++ 
Sbjct: 602  NPETVSTDYDTSDRLYFEPLTIEDVLEVSQREKPVGAIVQFGGQTPLRLSVP----LEKA 657

Query: 746  RLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEI 805
             LP         I GTSPD+ID AEDRERF  +I++L + QP+ G+A+S  +A  +A+ I
Sbjct: 658  GLP---------ILGTSPDAIDRAEDRERFAQLIEKLGLTQPENGVARSHEEAFRVAQRI 708

Query: 806  GYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALA 865
            GYPV+VRPSYVLGGRAME+VY  ++L  Y+  AV   PE PVLID++L +AIE+D+D +A
Sbjct: 709  GYPVMVRPSYVLGGRAMEVVYDQQSLERYMREAVSASPEHPVLIDRFLKEAIEVDLDLVA 768

Query: 866  DSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMN 925
            D  G V++GG++EH+E+AGVHSGD+AC +P  ++S   ++ +    I LA+ L V GLMN
Sbjct: 769  DRTGAVLVGGVLEHVEEAGVHSGDAACTLPPHSLSPDLVERMKDQAIALARELGVVGLMN 828

Query: 926  CQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIP- 984
             Q+AI     +Y+LE NPRASRTVPF+SKA G  LAK A+L M GK+L +LG T   IP 
Sbjct: 829  VQFAIQGK-TIYVLEVNPRASRTVPFISKATGVALAKIASLCMVGKTLAELGATS--IPE 885

Query: 985  -KHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGT 1043
             KHV+VKE+V PF +F G DV+LGPEM+STGEVMGI   FP AFAK+Q AAG KLP SG 
Sbjct: 886  FKHVAVKESVFPFARFAGVDVILGPEMKSTGEVMGIAADFPSAFAKSQQAAGVKLPRSGK 945

Query: 1044 VFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDM 1103
            VF+S+ +  KP +  +A+    +GFK+V+T GT  +L  KGI  E+VLK+ EGRPH  D 
Sbjct: 946  VFISVRNDDKPAVVDLARRLRALGFKLVTTGGTHDYLAAKGIETEKVLKVAEGRPHIVDK 1005

Query: 1104 VANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTVT 1163
            + +GQI +++ T+ G   +  D   +RR  L + VP  TTV  A     A+ SL     T
Sbjct: 1006 IVDGQIVLVINTTFGKQ-EISDSFSIRREALMHSVPYFTTVQAARMAVGAMESLTHTEQT 1064

Query: 1164 MTALQDFFDVE 1174
            +  LQD+  V+
Sbjct: 1065 VKPLQDYLGVK 1075


>gi|56609589|gb|AAW03322.1| hypothetical protein [Cystobacter fuscus]
          Length = 1075

 Score = 1301 bits (3366), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 638/1086 (58%), Positives = 814/1086 (74%), Gaps = 18/1086 (1%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KR D+RK+L++G+GPIVIGQA EFDYSGTQA KAL+EEG EV+L+NSNPAT+MTDP  A 
Sbjct: 3    KRNDIRKVLVIGSGPIVIGQASEFDYSGTQAIKALREEGVEVVLLNSNPATVMTDPEFAH 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
            RTYI P+T E+ E++L +ERPD++LPTMGGQTALNLA ALAE G L+KYGV LIGA L+A
Sbjct: 63   RTYIEPITVEVAERILAQERPDSVLPTMGGQTALNLAKALAEQGILDKYGVRLIGASLEA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR LFK AM+ IGV  P SG  + + E +++ ++IG FP IIRP+FTLGGTGGGI
Sbjct: 123  INKAEDRQLFKAAMQKIGVALPRSGYASNMQEALALIDDIG-FPTIIRPSFTLGGTGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEFEAIC++GL AS  S +LVE+S+LGWKEYELEV+RD ADNV+IICSIEN+DPMG
Sbjct: 182  AYNREEFEAICRSGLKASPNSTILVEESVLGWKEYELEVVRDSADNVIIICSIENLDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTD+EYQRLR+ S+ IIREIGV+ GGSN+QF VNP DG ++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDREYQRLREASLRIIREIGVDTGGSNIQFGVNPADGRIVVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRF 447
            PRVSRSSALASKATG+PIAK+AAKL++GY+LD++ NDIT+ TPASFEP++DYVV KIPRF
Sbjct: 302  PRVSRSSALASKATGYPIAKVAAKLALGYTLDELRNDITRDTPASFEPTLDYVVVKIPRF 361

Query: 448  AFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNV-KELDWDW 506
             FEKFP ++  LTT M++VGE MA+GRTF+E++ KA+RS+E G +G     +  E +   
Sbjct: 362  NFEKFPHADRTLTTSMRAVGEVMAMGRTFREAYLKAMRSMETGHTGLEAPELPTEKEERR 421

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
            + L+  +RV  P+R + +  A ++GM V+E+HELS ID WFL   + L+   Q +     
Sbjct: 422  KVLRDYVRVARPERPRYVAQAFREGMSVEEVHELSTIDPWFLRHIQGLVREAQAIQELGK 481

Query: 567  SNMTKDDFYE-VKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANT 625
             +   D+     K  GFSDK +A     TE EVR +R + G+ P YKRVDTCAAEFEA T
Sbjct: 482  LDALPDEVLRAAKVDGFSDKYLAQLLGCTEAEVRARRHAKGIRPVYKRVDTCAAEFEAYT 541

Query: 626  PYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNS 685
            PY+YS+Y+ E E+ PT ++KVLILG GP RIGQGIEFDYCC H +F+L+ AGYET+M+N 
Sbjct: 542  PYLYSTYEEEDEAPPTARQKVLILGSGPIRIGQGIEFDYCCVHAAFALREAGYETVMVNC 601

Query: 686  NPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEH 745
            NPETVSTDYDTSDRLYFEPLT+EDVL V   E+P G IVQFGGQTPL+LS+P    L++ 
Sbjct: 602  NPETVSTDYDTSDRLYFEPLTIEDVLEVSQREKPVGAIVQFGGQTPLRLSVP----LEKA 657

Query: 746  RLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEI 805
             LP         I GTSPD+ID AEDRERF  +I++L + QP+ G+A+S  +A  +A+ I
Sbjct: 658  GLP---------ILGTSPDAIDRAEDRERFAQLIEKLGLTQPENGVARSHEEAYRVAQRI 708

Query: 806  GYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALA 865
            GYPV+VRPSYVLGGRAME+VY  ++L  Y+  AV   PE PVLID++L +AIE+D+D +A
Sbjct: 709  GYPVMVRPSYVLGGRAMEVVYDQQSLERYMREAVSASPEHPVLIDRFLKEAIEVDLDLVA 768

Query: 866  DSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMN 925
            D  G V++GG++EH+E+AGVHSGD+AC +P  ++S   ++ +    + LAK L V GLMN
Sbjct: 769  DRTGAVLVGGVLEHVEEAGVHSGDAACTLPPHSLSPDLVERMKDQAMALAKELGVVGLMN 828

Query: 926  CQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPK 985
             Q+AI     +Y+LE NPRASRTVPF+SKA G PLAK A+L M GK+L +LG TKE   K
Sbjct: 829  VQFAIQGK-KIYILEVNPRASRTVPFISKATGMPLAKIASLCMVGKTLAELGATKEPEFK 887

Query: 986  HVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVF 1045
            HV+VKE+V PF +F G DV+LGPEM+STGEVMGI   FP AFAK+Q AAG KLP SG +F
Sbjct: 888  HVAVKESVFPFARFAGVDVILGPEMKSTGEVMGIAADFPSAFAKSQQAAGVKLPRSGKIF 947

Query: 1046 LSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVA 1105
            +S+ +  KP +  +A+    +GFK+V+T GT  +L  KGI  E+VLK+ EGRPH  D + 
Sbjct: 948  ISVRNDDKPAVVDLARRLRALGFKLVTTGGTHDYLANKGIETEKVLKVAEGRPHIVDKIV 1007

Query: 1106 NGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTVTMT 1165
            +GQI +++ T+ G   +  D   +RR  L + VP  TTV  A     A+ SL     T+ 
Sbjct: 1008 DGQIVLVINTTFGKQ-EISDSFSIRREALMHSVPYFTTVQAARMAVGAMESLIHTEQTVK 1066

Query: 1166 ALQDFF 1171
             LQD+ 
Sbjct: 1067 PLQDYL 1072


>gi|291287333|ref|YP_003504149.1| carbamoyl-phosphate synthase large subunit [Denitrovibrio acetiphilus
            DSM 12809]
 gi|290884493|gb|ADD68193.1| carbamoyl-phosphate synthase, large subunit [Denitrovibrio
            acetiphilus DSM 12809]
          Length = 1073

 Score = 1300 bits (3365), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 657/1088 (60%), Positives = 815/1088 (74%), Gaps = 25/1088 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KR DL+ I+I+G+GPIVIGQACEFDYSGTQA KALKEEGY VILINSNPATIMTDP +AD
Sbjct: 3    KREDLKSIMIIGSGPIVIGQACEFDYSGTQAVKALKEEGYRVILINSNPATIMTDPEIAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+T E+ E++LEKERPDA+LPT+GGQTALNLA  + ++G LEKY VELIGAK++A
Sbjct: 63   ATYIEPLTVEMAEKILEKERPDAILPTVGGQTALNLAKEINDAGLLEKYNVELIGAKIEA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR+LFKQAM  IG+  P S + NT  + +   +EIG FP IIRP+FTLGGTGG +
Sbjct: 123  IDKAEDRELFKQAMTKIGLHLPASAVCNTYQDALDCIDEIG-FPAIIRPSFTLGGTGGNV 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN EE++   + GL AS  +++LVEKS+LGWKEYELEVMRDL DNVVIICSIENVD MG
Sbjct: 182  AYNMEEYKEYVEWGLEASPVTEILVEKSVLGWKEYELEVMRDLNDNVVIICSIENVDAMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ LR+ +I +IREIGV+ GGSNVQFAVNP +G+ ++IEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQELRNAAIKVIREIGVDTGGSNVQFAVNPANGDQIIIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRF 447
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT KTPASFEP+IDY VTK PRF
Sbjct: 302  PRVSRSSALASKATGFPIAKIAAKLAVGYTLDELKNDITLKTPASFEPTIDYCVTKWPRF 361

Query: 448  AFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLE---CGFSGWGCSNVKELDW 504
             FEKFPG++  LTTQMKSVGEAMA+GRTF+ES QKA+ SLE   CGF         + + 
Sbjct: 362  TFEKFPGADDTLTTQMKSVGEAMAIGRTFKESLQKAISSLEIGKCGFDPVFTDEELKTEK 421

Query: 505  DWEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQ 564
              ++++  LR P  +RM  +  A + G  ++E+H L FID WFL   K++ID E  L T 
Sbjct: 422  AQDEIRALLRRPTAERMWYVAEAFRLGWSIEEVHSLCFIDPWFLHNIKQIIDFEAELQTL 481

Query: 565  SVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEAN 624
            ++  + +  F + K  GFSDK++A     +E +V EK     V   YKRVDTC AEFE+ 
Sbjct: 482  TIMTIDEAVFKKAKEYGFSDKRLAALLGCSELDVWEKTKGKVV---YKRVDTCGAEFESF 538

Query: 625  TPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMN 684
            TPY+YS+Y+ ECE+ PT +KK++ILGGGPNRIGQGIEFDYCC H SF+L+  G+ETIM+N
Sbjct: 539  TPYLYSTYEKECEAEPTDRKKIMILGGGPNRIGQGIEFDYCCVHASFALEEMGFETIMVN 598

Query: 685  SNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDE 744
             NPETVSTDYDTSDRLYFEPLT E VLN++  E P+G+IVQFGGQTPLKL++P+ +    
Sbjct: 599  CNPETVSTDYDTSDRLYFEPLTREHVLNIVQKENPDGVIVQFGGQTPLKLAVPLER---- 654

Query: 745  HRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKE 804
                       V I GTSPDSID AEDRERF A++++L I QP  GIAK+  +A  IA +
Sbjct: 655  ---------AGVPILGTSPDSIDCAEDRERFKALMEKLDIMQPANGIAKAADEAYKIADQ 705

Query: 805  IGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDAL 864
            IGYPVVVRPSYVLGGRAMEIVY  E+L  Y+  AV+   + PVLIDKYL  A E+DVD++
Sbjct: 706  IGYPVVVRPSYVLGGRAMEIVYDRESLENYMVYAVKASEDHPVLIDKYLLHATEVDVDSI 765

Query: 865  ADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLM 924
            +D     VIG IM+HIE+AGVHSGDSAC IPT+TI+ +    + + T ++AK LNV GLM
Sbjct: 766  SDG-ETCVIGSIMQHIEEAGVHSGDSACSIPTRTINDAVKAELMTKTKQIAKELNVVGLM 824

Query: 925  NCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIP 984
            N QYAI     +Y+LE NPRASRT+PFVSK+IG PLAK AA VM+G  L DLGFTKEV  
Sbjct: 825  NIQYAIKDD-QIYMLEVNPRASRTIPFVSKSIGVPLAKMAAKVMAGAKLKDLGFTKEVEI 883

Query: 985  KHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTV 1044
             + +VKE+V PF KF G D++LGPEM+STGEVMGID  +  A  KAQ+AAG KLP  G V
Sbjct: 884  NYHTVKESVFPFVKFPGTDIVLGPEMKSTGEVMGIDYDYGAAQYKAQLAAGNKLPKQGLV 943

Query: 1045 FLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEG-RPHAGDM 1103
            F+S+ND  KP + +IAK    +GF I+STSGT ++L   G  VE+V K+HEG RP+  D 
Sbjct: 944  FISVNDAVKPDILKIAKDLQALGFGIISTSGTYNYLTENGFEVEKVAKVHEGVRPNVVDK 1003

Query: 1104 VANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTVT 1163
            + NG+I  ++    G    ++D   +RR  L+Y VP +T+V  A A+  AI++ +   VT
Sbjct: 1004 IKNGKIAFVINIPEGKK-SRLDSESIRRVMLSYSVPYVTSVEAASASVIAIKASQKG-VT 1061

Query: 1164 MTALQDFF 1171
            +T LQ+F+
Sbjct: 1062 VTPLQEFY 1069


>gi|291279606|ref|YP_003496441.1| carbamoylphosphate synthase large subunit [Deferribacter
            desulfuricans SSM1]
 gi|290754308|dbj|BAI80685.1| carbamoylphosphate synthase, large subunit [Deferribacter
            desulfuricans SSM1]
          Length = 1075

 Score = 1300 bits (3363), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 641/1089 (58%), Positives = 816/1089 (74%), Gaps = 22/1089 (2%)

Query: 86   LGKRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGL 145
            + KR DL  I+I+G+GPIVIGQACEFDYSG+QA KALKEEGY V+L+NSNPATIMTDP  
Sbjct: 1    MPKREDLNTIMIIGSGPIVIGQACEFDYSGSQAVKALKEEGYRVVLVNSNPATIMTDPEF 60

Query: 146  ADRTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKL 205
            AD TYI P+T E+VE++++KE+PDA+LPT+GGQTALNLA+ L ++  LEKY VELIGAK+
Sbjct: 61   ADATYIEPLTVEIVEKIIKKEQPDAILPTVGGQTALNLAIDLHKARVLEKYNVELIGAKI 120

Query: 206  DAIKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGG 265
            DAI+KAEDR+LFK+AM  IG+  P S   N+ DE + +  +IG FP IIRP+FTLGGTGG
Sbjct: 121  DAIQKAEDRELFKKAMAKIGLDMPKSAYVNSYDEAMKVIKDIG-FPAIIRPSFTLGGTGG 179

Query: 266  GIAYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDP 325
             +AYN EE+      GL AS  +++LVE+S++GWKE ELEVMRDL DNVVIIC IEN DP
Sbjct: 180  NVAYNMEEYREYVIWGLEASPVNEILVEESIIGWKEIELEVMRDLKDNVVIICGIENFDP 239

Query: 326  MGVHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIE 385
            MGVHTGDSITVAP QTLTDKEYQ LRD +I +IREIGV+ GGSNVQFAV+P  G  ++IE
Sbjct: 240  MGVHTGDSITVAPIQTLTDKEYQYLRDAAIKVIREIGVDTGGSNVQFAVDPKTGRQVIIE 299

Query: 386  MNPRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIP 445
            MNPRVSRSSALASKATGFPIAK+AAKL+VGY+LD+IPNDITKKTPA FEP+IDY V K P
Sbjct: 300  MNPRVSRSSALASKATGFPIAKIAAKLAVGYTLDEIPNDITKKTPACFEPTIDYCVVKYP 359

Query: 446  RFAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWG-CSNVKELDW 504
            RF FEKFPG++  LTTQMKSVGE MA+GRTF+E+FQKA+ SLE G +G+    + +EL  
Sbjct: 360  RFTFEKFPGADDTLTTQMKSVGEVMAIGRTFKEAFQKAINSLEIGKTGFDEIFSEEELQK 419

Query: 505  D--WEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLL 562
            D   +++   L+ P   R+  I  +++ G  +DEI+ LS IDKWFL   KE+ID E+ + 
Sbjct: 420  DSVKDEIIRFLKRPTDKRVFYIAESLRAGFTIDEIYNLSKIDKWFLENIKEIIDFEKKI- 478

Query: 563  TQSVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFE 622
             +    + ++   E K+ GFSDK++A      E+++REKR +  + P YKRVDTCAAEFE
Sbjct: 479  -KETKKLDENTLIEAKKLGFSDKRLAKLLNLKEEDIREKRNTYNLKPVYKRVDTCAAEFE 537

Query: 623  ANTPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIM 682
            +NTPYMYS+++ ECES PT  KKV+ILGGGPNRIGQGIEFDYCC H S++L+  GYETIM
Sbjct: 538  SNTPYMYSTFEEECESYPTNNKKVVILGGGPNRIGQGIEFDYCCVHASYALREVGYETIM 597

Query: 683  MNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYL 742
            +N NPETVSTDYDTSDRLYFEPLT E V+N+I+ E P G+IVQFGGQTPLKL++P+ +  
Sbjct: 598  VNCNPETVSTDYDTSDRLYFEPLTFEHVMNIIEKENPYGVIVQFGGQTPLKLAVPLEK-- 655

Query: 743  DEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIA 802
                         V I GTSPDSID AEDRERF  ++K+++++QP  GIAK+  +AL IA
Sbjct: 656  -----------AGVNILGTSPDSIDIAEDRERFQKLLKDINLKQPDNGIAKNFEEALNIA 704

Query: 803  KEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVD 862
            + IGYPVVVRPSYVLGGRAMEIVY  ++L  Y++ AVE   E PVLIDK+L +AIE+DVD
Sbjct: 705  ENIGYPVVVRPSYVLGGRAMEIVYDQDSLKNYMKYAVEASEEHPVLIDKFLENAIEVDVD 764

Query: 863  ALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCG 922
            A++D    +V  GIM+HIE+AG+HSGDSAC IP +++S   ++ I   TI LA++LNV G
Sbjct: 765  AISDGESTIV-AGIMQHIEEAGIHSGDSACSIPPRSLSDEIIEEIKRATISLAEKLNVKG 823

Query: 923  LMNCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEV 982
            LMN QYAI     +Y+LE NPRASRTVP+VSK+IG  LAK A+ VM G  L DLGFTKEV
Sbjct: 824  LMNVQYAI-KDNQLYVLEVNPRASRTVPYVSKSIGKSLAKLASKVMVGYKLKDLGFTKEV 882

Query: 983  IPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSG 1042
               + +VKE+V PF KF G D +LGPEM+STGEVMGID +F  A+ KAQIAA   LP +G
Sbjct: 883  NIPYFTVKESVFPFTKFPGTDPILGPEMKSTGEVMGIDKTFGRAYYKAQIAANNSLPTTG 942

Query: 1043 TVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGD 1102
            TVF+S+ D  K  +  +AK    +GFKIV+T+GT  FL   GI  E VLK+ EGRP+  D
Sbjct: 943  TVFISVKDRVKKDILPVAKKLEKLGFKIVATTGTYKFLRENGINAEHVLKVQEGRPNIVD 1002

Query: 1103 MVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTV 1162
            ++ + +I  ++    G    ++D   +RR  L Y +P +TTV  A+A+   + +  +  +
Sbjct: 1003 LIKSDKIDFVINVPEGKK-SRLDSNSIRRVILNYNIPYVTTVEAAIASVNGVEAYLNEGL 1061

Query: 1163 TMTALQDFF 1171
            ++ +LQ+++
Sbjct: 1062 SVKSLQEYY 1070


>gi|116747460|ref|YP_844147.1| carbamoyl phosphate synthase large subunit [Syntrophobacter
            fumaroxidans MPOB]
 gi|116696524|gb|ABK15712.1| carbamoyl-phosphate synthase large subunit [Syntrophobacter
            fumaroxidans MPOB]
          Length = 1080

 Score = 1299 bits (3362), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 654/1091 (59%), Positives = 828/1091 (75%), Gaps = 22/1091 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD+RKILI+G+GPI+I QACEFDYSGTQACKAL+EEGYE++LINSNPATIMTDP  AD
Sbjct: 3    KRTDIRKILIIGSGPIIISQACEFDYSGTQACKALREEGYEIVLINSNPATIMTDPETAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
            RTYI P+TPE V +V+E+ERPDALLPT+GGQTALN+AV +AE+G LE++GV LIGA ++ 
Sbjct: 63   RTYIEPITPEAVAKVIERERPDALLPTLGGQTALNVAVRVAETGVLERFGVALIGASVEV 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            IKKAEDR+LF+ AMK IG++ P SGI  ++ E  SIA EIG FP+I+RP+FTLGGTGGG+
Sbjct: 123  IKKAEDRELFRDAMKRIGLRVPASGIARSMSEVESIAREIG-FPIIVRPSFTLGGTGGGV 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EE + + ++GL AS    V++E+S+LGWKE+ELEVMRD  DNVVIICSIEN+D MG
Sbjct: 182  AYNREELKELAQSGLDASFIHTVMLEESVLGWKEFELEVMRDCMDNVVIICSIENMDAMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTD+EYQ LRD SIAI+REIGVE GGSNVQFA+NP DGE++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDREYQLLRDASIAILREIGVETGGSNVQFAINPADGEMVVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRF 447
            PRVSRSSALASKATGFPIAK+AAKL+VGYSLD+I NDIT++T ASFEP+IDY V K+PRF
Sbjct: 302  PRVSRSSALASKATGFPIAKIAAKLAVGYSLDEIANDITRETRASFEPTIDYCVVKVPRF 361

Query: 448  AFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW- 506
             FEKFP +E  L+T MKSVGE MA+GRTF+E+  KA+RSLE G  G+        D ++ 
Sbjct: 362  TFEKFPRTEDFLSTSMKSVGETMAIGRTFKEALHKAVRSLEIGRFGF-VDPPANADREYM 420

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
            E+L+  LR PN  R+  I  A+K GM ++E+H L+FID WFL   ++++ +E  +   + 
Sbjct: 421  ERLRQKLRRPNSMRLFQIGEALKLGMPIEELHALTFIDPWFLHHIRQVLLLEDEIRGDAD 480

Query: 567  SNMTKDDFYEV---KRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEA 623
             +   DD   V   K  GFSD ++A  + S E+ VR+ R+  G+ P YK VDTCAAEFEA
Sbjct: 481  RSGFLDDPERVRYAKSWGFSDVRLAQLSGSDEETVRQLRIKHGIKPVYKLVDTCAAEFEA 540

Query: 624  NTPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMM 683
             TPY YS+Y+ E E+ PT + KV+ILGGGPNRIGQGIEFDYCC H SFSL+   +E+IM+
Sbjct: 541  YTPYYYSTYETEDEARPTGRPKVVILGGGPNRIGQGIEFDYCCVHASFSLREEDHESIMV 600

Query: 684  NSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLD 743
            NSNPETVSTDYDTSD+LYFEPLT EDVL+++D E+P+G+IVQFGGQTPL LS+P+ +   
Sbjct: 601  NSNPETVSTDYDTSDKLYFEPLTREDVLHILDTEKPKGVIVQFGGQTPLNLSVPLEK--- 657

Query: 744  EHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAK 803
                         RI GTSPD+ID AEDR+RF  ++++L ++QP+   A +  +A   A 
Sbjct: 658  ----------AGARILGTSPDAIDRAEDRKRFQKLLQKLGLKQPRNATAFTLREAAEAAG 707

Query: 804  EIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDA 863
             IGYPVVVRPSYVLGGRAMEIV+    L ++++ AV V P  P+LID++L DA+EIDVDA
Sbjct: 708  RIGYPVVVRPSYVLGGRAMEIVFDAAMLESFMKTAVHVSPGHPILIDQFLEDAVEIDVDA 767

Query: 864  LADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGL 923
            ++D    VV GGIMEHIEQAG+HSGDSAC++P  +IS S  + I   T  LAK L V GL
Sbjct: 768  ISDGTVTVV-GGIMEHIEQAGIHSGDSACVLPPMSISRSIQEEIRRQTRLLAKELGVVGL 826

Query: 924  MNCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVI 983
            MN Q+A+  +G++++LE NPRASRT+PFVSKAIG PLAK A  VM GKSL +LGF  EV 
Sbjct: 827  MNIQFAL-QNGEIFILEVNPRASRTIPFVSKAIGFPLAKLATRVMLGKSLKELGFDTEVE 885

Query: 984  PKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGT 1043
            P+H+SVKEAV PF +F   DVLLGPEM+STGEVMGI  +F IAFAKAQ A G +LP SGT
Sbjct: 886  PEHISVKEAVFPFSRFPNVDVLLGPEMKSTGEVMGIGSTFGIAFAKAQAAVGYELPTSGT 945

Query: 1044 VFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDM 1103
            VF+S++D  KP +  +A+ F ++GF++++T+GTA FL   GI    V K+ EGRPH  D 
Sbjct: 946  VFISVHDADKPKVLSVARKFGEMGFQLIATAGTADFLNGNGIRTRPVFKLKEGRPHVVDR 1005

Query: 1104 VANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTVT 1163
            + NG++Q++V TS G      D  ++RR  L Y +P  TT++GA A AEA+  L+     
Sbjct: 1006 IKNGEVQLVVNTSMGKKTTS-DSYEIRRTTLIYNIPYATTIAGAKAMAEAVSELQRGDWD 1064

Query: 1164 MTALQDFFDVE 1174
            +  LQ++   E
Sbjct: 1065 VRTLQEYHHRE 1075


>gi|297568880|ref|YP_003690224.1| carbamoyl-phosphate synthase, large subunit [Desulfurivibrio
            alkaliphilus AHT2]
 gi|296924795|gb|ADH85605.1| carbamoyl-phosphate synthase, large subunit [Desulfurivibrio
            alkaliphilus AHT2]
          Length = 1073

 Score = 1298 bits (3360), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 649/1085 (59%), Positives = 826/1085 (76%), Gaps = 19/1085 (1%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++KILI+G+GPI+I QACEFDYSGTQA KALKEEGY+V+LINSNPATIMTDP +AD
Sbjct: 3    KRTDIKKILIIGSGPIIISQACEFDYSGTQAVKALKEEGYQVVLINSNPATIMTDPEIAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+TPE V +V+E+ERPDALLPT+GGQT LN A+ +AE G LEKYGVEL+ A++D 
Sbjct: 63   ATYIEPITPEFVAKVIERERPDALLPTLGGQTGLNTAIRVAEMGVLEKYGVELLAARIDV 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I+KAE RD F++AM+ IG+K P S I +T+ E  + A EIG FP+I+RP+FTLGGTGGGI
Sbjct: 123  IRKAEGRDSFREAMRKIGLKVPESVIIHTIAEAKTAAVEIG-FPVIVRPSFTLGGTGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN++E E IC+ GL  S+ S+V++EKSLLGWKEYELEVMRD  DNVVIICSIEN+DPMG
Sbjct: 182  AYNQQELEDICEHGLDLSINSEVMLEKSLLGWKEYELEVMRDKNDNVVIICSIENLDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTD+EYQ +RD S+AI+REIGVE GGSNVQFAVNP DGE+MVIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDREYQLMRDASLAIMREIGVETGGSNVQFAVNPADGELMVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRF 447
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD+I NDIT++T ASFEP+IDY V KIPR+
Sbjct: 302  PRVSRSSALASKATGFPIAKIAAKLAVGYTLDEIRNDITRETYASFEPAIDYCVVKIPRW 361

Query: 448  AFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKEL--DWD 505
             FEKFP ++ LLTT MKSVGE MA+GRTF+E+ QK LRSLE G SG+G     E     D
Sbjct: 362  TFEKFPEADDLLTTAMKSVGETMAIGRTFKEAMQKGLRSLEIGCSGFGADPKFEKFSQLD 421

Query: 506  WEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQS 565
               L+ +LR P+  R+  +Y A+++GM V+ +H  + ID WFL     ++++E+ +    
Sbjct: 422  DTDLENALRKPSSMRVFQLYEALRRGMGVERLHRTTMIDPWFLHHLAGILEMEKEIRQAG 481

Query: 566  VSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANT 625
             + +T++   +VKR G+SD+Q+AF T ++E +VRE R  L   P YK VDTCAAEFEA T
Sbjct: 482  FTGLTRELLEQVKRSGYSDRQLAFLTGTSEDDVRELREKLNCKPVYKLVDTCAAEFEAYT 541

Query: 626  PYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNS 685
            PY YS+Y+FE E   + ++KV+ILGGGPNRIGQGIEFDYCC H SF+L+  G E+IM+NS
Sbjct: 542  PYYYSTYEFEDEGRESNQRKVMILGGGPNRIGQGIEFDYCCVHASFALRELGVESIMVNS 601

Query: 686  NPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEH 745
            NPETVSTDYDTSDRLYFEPLT EDVLN+I+ E+PEG+IVQFGGQTPL L++P+       
Sbjct: 602  NPETVSTDYDTSDRLYFEPLTREDVLNIIEKEKPEGVIVQFGGQTPLNLAVPL------- 654

Query: 746  RLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEI 805
               + +G   V I GTSPDSID AEDRERF   +++L++ QP  G+A+   +A+ +A++I
Sbjct: 655  ---AKAG---VPIIGTSPDSIDRAEDRERFQQFLQKLNLRQPANGLARQAEEAIKVARDI 708

Query: 806  GYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALA 865
            GYPVVVRPSYVLGGRAM IVY +  L  Y+  AV+V PE P+LIDK+L DAIE+DVDA++
Sbjct: 709  GYPVVVRPSYVLGGRAMRIVYNERELNNYIATAVDVSPEHPILIDKFLKDAIEVDVDAVS 768

Query: 866  DSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMN 925
            D     +IGGIM+HIE+AG+HSGDSAC++P  T++   L+ I + +  +A  L V GLMN
Sbjct: 769  DG-ETTIIGGIMQHIEEAGIHSGDSACVMPPHTLAPEMLEEIKTASKAMAAELKVKGLMN 827

Query: 926  CQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPK 985
             Q+A+  +  +++LE NPRASRTVPFVSKA G PLAK A  VM G++L  LG T EV  K
Sbjct: 828  VQFAVKDN-TLFVLEVNPRASRTVPFVSKATGVPLAKLATKVMMGETLASLGLTSEVKIK 886

Query: 986  HVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVF 1045
            H +VKEAV PF++F   D +LGPEM+STGEVMGID    +AFAK+Q+AAGQK+P +GTVF
Sbjct: 887  HFAVKEAVFPFDRFDNVDTILGPEMKSTGEVMGIDDCVGLAFAKSQLAAGQKIPQTGTVF 946

Query: 1046 LSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVA 1105
            LS+    KP +  IA+   ++GF +V+T GTA  L  +G+   +V K+ EGRPH  DMV 
Sbjct: 947  LSVRHPDKPAIVPIARRLSELGFTLVATPGTATHLAEQGVQCNQVNKISEGRPHVLDMVN 1006

Query: 1106 NGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTVTMT 1165
            N QIQ +V  S G    + D   +RR  L Y +P  TT++GA +   AI +++  T+ + 
Sbjct: 1007 NHQIQWIVNISMGTRTTE-DSYTIRRAALDYHLPYTTTIAGAESMVRAISTMQEKTMGVK 1065

Query: 1166 ALQDF 1170
             +QDF
Sbjct: 1066 PIQDF 1070



 Score =  249 bits (636), Expect = 7e-63,   Method: Compositional matrix adjust.
 Identities = 143/397 (36%), Positives = 226/397 (56%), Gaps = 19/397 (4%)

Query: 87  GKRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLA 146
           G+ ++ RK++ILG GP  IGQ  EFDY    A  AL+E G E I++NSNP T+ TD   +
Sbjct: 554 GRESNQRKVMILGGGPNRIGQGIEFDYCCVHASFALRELGVESIMVNSNPETVSTDYDTS 613

Query: 147 DRTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLD 206
           DR Y  P+T E V  ++EKE+P+ ++   GGQT LNLAV LA      K GV +IG   D
Sbjct: 614 DRLYFEPLTREDVLNIIEKEKPEGVIVQFGGQTPLNLAVPLA------KAGVPIIGTSPD 667

Query: 207 AIKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGG 266
           +I +AEDR+ F+Q ++ + ++ P +G+    +E I +A +IG +P+++RP++ LGG    
Sbjct: 668 SIDRAEDRERFQQFLQKLNLRQPANGLARQAEEAIKVARDIG-YPVVVRPSYVLGGRAMR 726

Query: 267 IAYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPM 326
           I YN+ E        +  S    +L++K L    E +++ + D  +  +I   +++++  
Sbjct: 727 IVYNERELNNYIATAVDVSPEHPILIDKFLKDAIEVDVDAVSD-GETTIIGGIMQHIEEA 785

Query: 327 GVHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEM 386
           G+H+GDS  V P  TL  +  + ++  S A+  E+ V+ G  NVQFAV   D  + V+E+
Sbjct: 786 GIHSGDSACVMPPHTLAPEMLEEIKTASKAMAAELKVK-GLMNVQFAVK--DNTLFVLEV 842

Query: 387 NPRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPR 446
           NPR SR+    SKATG P+AK+A K+ +G +L  +          + E  I +   K   
Sbjct: 843 NPRASRTVPFVSKATGVPLAKLATKVMMGETLASL--------GLTSEVKIKHFAVKEAV 894

Query: 447 FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKA 483
           F F++F   + +L  +MKS GE M +      +F K+
Sbjct: 895 FPFDRFDNVDTILGPEMKSTGEVMGIDDCVGLAFAKS 931


>gi|386810878|ref|ZP_10098104.1| carbamoyl-phosphate synthase large subunit [planctomycete KSU-1]
 gi|386405602|dbj|GAB60985.1| carbamoyl-phosphate synthase large subunit [planctomycete KSU-1]
          Length = 1101

 Score = 1297 bits (3357), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 653/1113 (58%), Positives = 823/1113 (73%), Gaps = 45/1113 (4%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD+ KILI+G+GPIVIGQACEFDYSGTQACKAL+EEGY V+L+NSNPATIMTDP +AD
Sbjct: 3    KRTDIEKILIIGSGPIVIGQACEFDYSGTQACKALREEGYNVVLVNSNPATIMTDPEIAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
            +TYI P+T E+V +++ KERP ALLPT+GGQT LN AV LAE G L++YGVELIGAKL+A
Sbjct: 63   KTYIEPITHEIVAKIIAKERPQALLPTLGGQTGLNTAVQLAEKGVLDEYGVELIGAKLEA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            IKKAEDR LFK AMK IG+  P SG  ++ DE + I ++IG FP IIRP+FTLGG+GG  
Sbjct: 123  IKKAEDRLLFKLAMKRIGISVPESGYAHSYDEAMEIIDKIG-FPAIIRPSFTLGGSGGNA 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN EE++   K  L AS   +VL+E+S+LGWKEYELEVMRDL DNVVI+CSIEN DPMG
Sbjct: 182  AYNIEEYKEYIKIALDASPVHEVLIERSVLGWKEYELEVMRDLKDNVVIVCSIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTD EYQ +R+ +I IIREIGVE GGSN+QFAVNP DGEV+ IEMN
Sbjct: 242  VHTGDSITVAPAQTLTDVEYQFMRNAAIKIIREIGVETGGSNIQFAVNPEDGEVLAIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRF 447
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD+IPNDIT+ TPA FEP+IDY V K+PRF
Sbjct: 302  PRVSRSSALASKATGFPIAKIAAKLAVGYTLDEIPNDITRYTPACFEPTIDYCVVKVPRF 361

Query: 448  AFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSG----WGCSNVKELD 503
             FEKFP ++P LT  MKSVGE MA+GRTF+E+  KA+RSLE G  G    W   + K   
Sbjct: 362  NFEKFPDTDPTLTIHMKSVGEVMAIGRTFKEAIGKAIRSLEIGRYGFETLWPLGSDK--- 418

Query: 504  WDWEQ----LKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVE- 558
            W  +Q    L+  L VPNPDR+  I  A++ G+ +DEI   + ID+WFL   K+++D+E 
Sbjct: 419  WSTKQRLEFLRGKLMVPNPDRLWYIADAIRLGVNLDEIFTWTHIDRWFLYNIKQVLDLEV 478

Query: 559  --------------QFLLTQSVS--NMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKR 602
                          Q  L Q  +  N+ K+   E K+ G+SDK +A+     EK +R+ R
Sbjct: 479  EIKQKWPKHRDNLSQASLYQGDNGFNIEKEMLIEAKQCGYSDKYLAYLCNVDEKTIRQYR 538

Query: 603  LSLGVIPSYKRVDTCAAEFEANTPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEF 662
                + P +K VDTCAAEF+A TPY+YS+Y+  CE+ PT++KK++ILG GPNRIGQGIEF
Sbjct: 539  QKEAIRPVFKHVDTCAAEFKAFTPYLYSTYETSCEAEPTREKKIIILGSGPNRIGQGIEF 598

Query: 663  DYCCCHTSFSLQSAGYETIMMNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGI 722
            DYCC H   +L+  GYETIM+N NPETVSTDYDTSDRLYFEPLT+EDVL ++D E+PEGI
Sbjct: 599  DYCCVHGVSALRELGYETIMINCNPETVSTDYDTSDRLYFEPLTLEDVLEIVDKEKPEGI 658

Query: 723  IVQFGGQTPLKLSLPIHQYLDEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKEL 782
            IVQFGGQTPLKL++P+ +            +G V+I GTSPDSID AEDRERF A++ +L
Sbjct: 659  IVQFGGQTPLKLAVPLEK------------EG-VKILGTSPDSIDIAEDRERFAALMNQL 705

Query: 783  SIEQPKGGIAKSEADALAIAKEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVD 842
             + QP  G A+S+A+A  IA +IGYPV++RPSYVLGGRAM +VY +  L  Y+ +AV+V 
Sbjct: 706  KLRQPNNGCARSDAEAKVIASKIGYPVMLRPSYVLGGRAMRVVYDEMGLENYVTHAVQVS 765

Query: 843  PERPVLIDKYLSDAIEIDVDALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSS 902
            PE PVLID++L DAIEIDVDA+ D    V IGGIMEHIE+AG+HSGDSAC +P  +I   
Sbjct: 766  PEHPVLIDQFLEDAIEIDVDAICDG-KEVFIGGIMEHIEEAGIHSGDSACSLPPYSIEKD 824

Query: 903  CLDTISSWTIKLAKRLNVCGLMNCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAK 962
             +  +   T  +A  LNV GL+N QYAI     VY+LE NPRASRTVPFVSKAIG P+AK
Sbjct: 825  IIHELKKQTQVIALALNVIGLINIQYAIKNKM-VYVLEVNPRASRTVPFVSKAIGIPMAK 883

Query: 963  YAALVMSGKSLNDLGFTKEVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMS 1022
             AA V++GK L++L  +  +  KHV+VKEAV PF KF+G D +LGPEM+STGEVMG+DM 
Sbjct: 884  IAAKVIAGKRLSELSISMNMKLKHVAVKEAVFPFLKFKGVDTILGPEMKSTGEVMGLDMD 943

Query: 1023 FPIAFAKAQIAAGQKLPLSGTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLEL 1082
            F  A+AK+Q+AA   LPL+GTVF+S+ D  K  +  IAK  L +GFKIV+T GTA  L  
Sbjct: 944  FGRAYAKSQMAADCSLPLTGTVFMSVRDRDKKSMVPIAKKLLHMGFKIVATRGTAMVLSG 1003

Query: 1083 KGIAVERVLKMHEGRPHAGDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVIT 1142
              ++V R LK+ EGRP+  D + N +IQ+++ T  G +  Q     +RR  L +++P  T
Sbjct: 1004 DNVSVTRALKVIEGRPNIVDHIKNNEIQLVINTIEGKAA-QEASYSIRRTALIHRIPYFT 1062

Query: 1143 TVSGALANAEAIRSLKSNTVTMTALQDFFDVET 1175
            TV+GA+A  +AI +LKS  + +  +Q+++  E+
Sbjct: 1063 TVAGAIAATKAIEALKSGILDVKPIQEYYHTES 1095


>gi|406897259|gb|EKD41268.1| hypothetical protein ACD_73C00786G0003 [uncultured bacterium]
          Length = 1088

 Score = 1297 bits (3356), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 665/1088 (61%), Positives = 814/1088 (74%), Gaps = 22/1088 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTDL+KI+I+GAGPIVIGQACEFDYSGTQ  KALKEEGY+V+L+NSNPATIMTDP LAD
Sbjct: 3    KRTDLKKIMIIGAGPIVIGQACEFDYSGTQGVKALKEEGYQVVLVNSNPATIMTDPDLAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+TPE+VE +LEKERPDALLPT+GGQTALN AV LA++G L++ GVELIGAKLDA
Sbjct: 63   ATYIEPITPEVVEAILEKERPDALLPTLGGQTALNTAVTLAKNGVLKRLGVELIGAKLDA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I+KAEDR+LFK+AM+ IGVK P S +   L E + I   IG FP I+RPAFTLGG GGGI
Sbjct: 123  IEKAEDRELFKKAMQKIGVKVPKSCLVRNLKEGLKIVKSIG-FPAILRPAFTLGGMGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AY  EE++++   GL  S  SQVLVE+S+LGWKEYELEVMRD  DNVVI+CSIEN+DPMG
Sbjct: 182  AYTLEEYKSMIAWGLECSPISQVLVEQSVLGWKEYELEVMRDTKDNVVIVCSIENLDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            +HTGDSITVAPAQTLTD+EYQ +RD ++AIIREIGV+ GGSN+QFA NP +G+++VIEMN
Sbjct: 242  IHTGDSITVAPAQTLTDREYQVMRDAALAIIREIGVDTGGSNIQFATNPKNGDMIVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRF 447
            PRVSRSSALASKATGFPIAK A KL+VGY+LD+I NDITK TPASFEPSIDYVVTK+PRF
Sbjct: 302  PRVSRSSALASKATGFPIAKFATKLAVGYTLDEIRNDITKYTPASFEPSIDYVVTKVPRF 361

Query: 448  AFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWG--CSNVKELDWD 505
             FEKFP ++  LTTQMKSVGE MA+GRTF+ES QKALRSLE G  G+       K     
Sbjct: 362  TFEKFPQADDRLTTQMKSVGEVMAIGRTFKESLQKALRSLEIGVYGFDEKVLKGKSKIEK 421

Query: 506  WEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFL--LT 563
             ++L   LRVP  DR+  +  A + G+K+ +I + + ID WFL   +E+I  E+ L  L 
Sbjct: 422  KKELLEKLRVPRADRLWWVGQAFRLGLKIADIFKETKIDPWFLKHIEEIILAEKSLIKLK 481

Query: 564  QSV-SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFE 622
            + V   +   +  E K+ GFSD+++A     +EKE+R  R    + P +KRVDTCAAEFE
Sbjct: 482  KKVGKRIPAAELLEAKKMGFSDRRLAKIWDLSEKEIRTLREKHKIRPVFKRVDTCAAEFE 541

Query: 623  ANTPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIM 682
            A+TPYMYSSYD E E+ PT KKKV+ILGGGPNRIGQGIEFDYCC H SF+L   GYETIM
Sbjct: 542  AHTPYMYSSYDQENEANPTDKKKVIILGGGPNRIGQGIEFDYCCVHASFALSEEGYETIM 601

Query: 683  MNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYL 742
            +N NPETVSTDYDTSDRLYFEPLT EDV  +I+ E+P GIIVQFGGQTPLKL++P+ ++ 
Sbjct: 602  VNCNPETVSTDYDTSDRLYFEPLTFEDVTRIIEEEKPIGIIVQFGGQTPLKLAVPLEEW- 660

Query: 743  DEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIA 802
                   A+      I GTSP SID AEDR+RF+ ++  L + QP  GIA S  +AL  A
Sbjct: 661  ------GAT------ILGTSPSSIDEAEDRKRFSDLLNRLQLRQPDNGIACSLGEALLAA 708

Query: 803  KEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVD 862
            K+IGYPV+VRPSYVLGGRAM+IVY +  L  Y+ENAV    +RPVLID+YL  AIE+DVD
Sbjct: 709  KKIGYPVLVRPSYVLGGRAMQIVYDEAGLRHYMENAVMASEDRPVLIDRYLEGAIEVDVD 768

Query: 863  ALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCG 922
            AL D   +VVIGGIMEHIE AG+HSGDSAC IP  ++S+  +  I+  T  LA  L V G
Sbjct: 769  ALCDGT-DVVIGGIMEHIEHAGIHSGDSACCIPPHSLSTQVIHEITRQTKILALELKVIG 827

Query: 923  LMNCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEV 982
            LMN QYA+     VY+LE NPRASRTVPFVSKAIG PLAK AA +M GK L++LGFT+E+
Sbjct: 828  LMNVQYAVRDE-TVYILEVNPRASRTVPFVSKAIGVPLAKLAARIMVGKKLSELGFTEEI 886

Query: 983  IPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSG 1042
            +P + SVKEAV PF KF G D LLGPEM+STGEVMGID  F +AFAKAQ+AAG KLP  G
Sbjct: 887  LPPYRSVKEAVFPFAKFPGVDTLLGPEMKSTGEVMGIDDEFGMAFAKAQLAAGTKLPEKG 946

Query: 1043 TVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGD 1102
             VF+S+ D  K  +  IA+     GF +++T GT+  L  +G+ VE + K++EG PH  D
Sbjct: 947  CVFISIRDADKEAVVPIAEKLNAHGFSLLATKGTSKLLRERGLKVESINKVYEGSPHIVD 1006

Query: 1103 MVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTV 1162
             +   ++ M++ T  G  L  +D   +RR  L   +P  TTV+ A A  E I SL+   V
Sbjct: 1007 RMLEDRVAMVINTHEG-KLTALDSYSIRRTALTEGIPYFTTVAAAKAAVEGIVSLRQQKV 1065

Query: 1163 TMTALQDF 1170
            ++T++Q++
Sbjct: 1066 SVTSIQEY 1073


>gi|374298493|ref|YP_005050132.1| carbamoyl-phosphate synthase large subunit [Desulfovibrio africanus
            str. Walvis Bay]
 gi|332551429|gb|EGJ48473.1| carbamoyl-phosphate synthase, large subunit [Desulfovibrio africanus
            str. Walvis Bay]
          Length = 1140

 Score = 1296 bits (3353), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 664/1126 (58%), Positives = 834/1126 (74%), Gaps = 33/1126 (2%)

Query: 53   LTRYSRSRVRASSAKIDSSAELSNGAASSKDQKLGKRTDLRKILILGAGPIVIGQACEFD 112
            L R  RS     S     SA LS  A +     + KRTDL+KI+++G+GPIVIGQ CEFD
Sbjct: 39   LRRADRS---GKSPAFPPSANLSRPANA-----MPKRTDLKKIMLIGSGPIVIGQGCEFD 90

Query: 113  YSGTQACKALKEEGYEVILINSNPATIMTDPGLADRTYITPMTPELVEQVLEKERPDALL 172
            YSGTQA KALKEEGYEV+L+NSNPATIMTDP LADRTYI P+TPE+V +++EKERPDALL
Sbjct: 91   YSGTQAVKALKEEGYEVVLVNSNPATIMTDPELADRTYIEPITPEVVAKIIEKERPDALL 150

Query: 173  PTMGGQTALNLAVALAESGALEKYGVELIGAKLDAIKKAEDRDLFKQAMKTIGVKTPPSG 232
            PT+GGQT LN A+A+AESG L+++GVELIGA   AI+KAE R  F++AM  IG+K P SG
Sbjct: 151  PTLGGQTGLNTALAVAESGVLDQFGVELIGASQVAIRKAESRQEFREAMARIGLKVPESG 210

Query: 233  IGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGIAYNKEEFEAICKAGLAASLTSQVLV 292
            I   +D+      +I  FP+I+RPAFTLGGTGGG+AYN E+ EAI   GL AS+ S+V++
Sbjct: 211  IARNMDDVREWGQKIA-FPIIVRPAFTLGGTGGGVAYNMEDLEAIAGRGLDASVKSEVML 269

Query: 293  EKSLLGWKEYELEVMRDLADNVVIICSIENVDPMGVHTGDSITVAPAQTLTDKEYQRLRD 352
            E+S+LGWKEYELEVM D A N VIICSIEN+DPMGVHTGDSITVAPAQTLTD EYQ++RD
Sbjct: 270  EQSVLGWKEYELEVMCDTAGNGVIICSIENLDPMGVHTGDSITVAPAQTLTDDEYQKMRD 329

Query: 353  YSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMNPRVSRSSALASKATGFPIAKMAAKL 412
             ++AI+REIGV  GGSNVQFAVNP DG++++IEMNPRVSRSSALASKATGFPIAK+AAKL
Sbjct: 330  AALAIMREIGVSTGGSNVQFAVNPADGDMVIIEMNPRVSRSSALASKATGFPIAKIAAKL 389

Query: 413  SVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRFAFEKFPGSEPLLTTQMKSVGEAMAL 472
            +VGY+LD+IPNDIT++T ASFEP+IDY V KIPRF FEKFPG+E  LTT MKSVGE MA+
Sbjct: 390  AVGYTLDEIPNDITRETMASFEPTIDYCVVKIPRFTFEKFPGAEDYLTTAMKSVGETMAI 449

Query: 473  GRTFQESFQKALRSLECGFSGWGCSNVKELDWDWEQLKYSLRVPNPDRMQAIYAAMKKGM 532
            GRTF+E+ QK +RSLE G SG G S     + D + L  SLR PN  R+ ++  AM+ G+
Sbjct: 450  GRTFKEALQKGMRSLETGLSGLG-SEFGPPECDLDTLAASLRKPNSKRLLSVRQAMRCGL 508

Query: 533  KVDEIHELSFIDKWFLTQFKELIDVE----QFLLTQSVSNMTKD---DFYEVKRRGFSDK 585
              ++I +L+ ID WFL Q +E++D E    +F L +S+S           + K  GFSD 
Sbjct: 509  SNEDIFDLTAIDPWFLRQIREIVDAEEELREFGLHESISPDNAKLPATLVKAKTLGFSDP 568

Query: 586  QIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTPYMYSSYDFECESAPTQKKK 645
            Q+A   K T K+VR+ R +LGV P+Y  VDTCAAEFEA TPY YS+Y+   E  P  K+K
Sbjct: 569  QLAALWKRTPKDVRDLRKALGVKPTYYLVDTCAAEFEAYTPYYYSTYEKGSEMQPGNKRK 628

Query: 646  VLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSNPETVSTDYDTSDRLYFEPL 705
            V+ILGGGPNRIGQGIEFDYCCCH SF+L+  G E+IM+NSNPETVSTDYDTS RLYFEPL
Sbjct: 629  VVILGGGPNRIGQGIEFDYCCCHCSFALKELGVESIMVNSNPETVSTDYDTSTRLYFEPL 688

Query: 706  TVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHRLPSASGDGLVRIWGTSPDS 765
            T+EDVLN+IDLE+PEG++VQFGGQTPL L++P+ +            +G V+I GTSPDS
Sbjct: 689  TLEDVLNIIDLEQPEGVVVQFGGQTPLNLAVPLLR------------NG-VKILGTSPDS 735

Query: 766  IDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEIGYPVVVRPSYVLGGRAMEIV 825
            ID AEDRERF A++ +L ++QP    A SE +AL  A++IGYPVVVRPSYVLGGRAM I+
Sbjct: 736  IDRAEDRERFQALLNKLDLKQPPNATAFSEGEALIKAQKIGYPVVVRPSYVLGGRAMAII 795

Query: 826  YTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALADSCGNVVIGGIMEHIEQAGV 885
            Y+ E L  Y +  V V PE P+L+D++L +AIE+DVDAL+D   +  + GIMEHIE+AG+
Sbjct: 796  YSPEELSAYFKKEVLVAPEHPILVDQFLENAIEVDVDALSDGT-DTYVAGIMEHIEEAGI 854

Query: 886  HSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNCQYAITTSGDVYLLEANPRA 945
            HSGDSAC+IP  TIS      I   TI LA+ L V GLMN Q+AI     V++LE NPRA
Sbjct: 855  HSGDSACVIPPHTISKELQAEIERQTIALAQELGVVGLMNIQFAIKDD-VVFILEVNPRA 913

Query: 946  SRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPKHVSVKEAVLPFEKFQGCDVL 1005
            SRT PFVSKA G PL + A  +M G SL +L         +VSVKE+V PF +F   DVL
Sbjct: 914  SRTAPFVSKATGVPLPRLATQIMLGASLKELDPWSMRKGGYVSVKESVFPFGRFPNVDVL 973

Query: 1006 LGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVFLSLNDLTKPHLERIAKAFLD 1065
            LGPEMRSTGEVMGID SF +AFAK+Q AAGQKLP +G VF+S+ND  K  +   A  F D
Sbjct: 974  LGPEMRSTGEVMGIDRSFGLAFAKSQFAAGQKLPTNGAVFISVNDRDKEAIVPAATTFRD 1033

Query: 1066 IGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVANGQIQMMVITSSGDSLDQID 1125
            +GFK+++T+GTA  L   GI  E VLK++EGRP+  D++ N Q+Q+++ T+SG    Q D
Sbjct: 1034 MGFKVLATAGTAKVLREYGIQAETVLKVYEGRPNIVDLIKNKQVQLVINTASGKKTVQ-D 1092

Query: 1126 GLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTVTMTALQDFF 1171
              +LR+  L Y +P  TT+SGA A A+A++ L+ + + + +LQ+++
Sbjct: 1093 SKELRQATLLYGIPYTTTISGAAAVAQAVQELRKSELGVRSLQEYY 1138


>gi|86158154|ref|YP_464939.1| carbamoyl phosphate synthase large subunit [Anaeromyxobacter
            dehalogenans 2CP-C]
 gi|85774665|gb|ABC81502.1| carbamoyl-phosphate synthase large subunit [Anaeromyxobacter
            dehalogenans 2CP-C]
          Length = 1077

 Score = 1295 bits (3351), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 640/1092 (58%), Positives = 816/1092 (74%), Gaps = 29/1092 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            +RTD++KI+I+G+GPIVIGQACEFDYSGTQACKALKEEGYEV+L+NSNPATIMTDPG AD
Sbjct: 3    RRTDIKKIMIVGSGPIVIGQACEFDYSGTQACKALKEEGYEVVLLNSNPATIMTDPGFAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
            RTY+ P+TPE  E +L +E+PD LLPT+GGQTALNLAVALA +GAL ++GVELIGA L+A
Sbjct: 63   RTYVEPITPETAELILAREKPDVLLPTLGGQTALNLAVALARNGALARHGVELIGASLEA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I+KAEDR LFK+AM+ +GV+ P SG   + +E  +IA +IG FP+IIRP+FT+GG GGG+
Sbjct: 123  IEKAEDRLLFKEAMERVGVELPKSGYATSWEEARAIARDIG-FPIIIRPSFTMGGEGGGV 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN EEFE + +  L  S T  +L E+S++GWKEYELEVMRD  DNVVIICSIEN DPMG
Sbjct: 182  AYNLEEFEPLARRALTLSPTHTILCEESIIGWKEYELEVMRDRKDNVVIICSIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQR+R+  + IIREIGVE GGSN+QF V+P  G ++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQRMREAGLRIIREIGVETGGSNIQFGVHPQTGRMVVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRF 447
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD+I NDIT+ TPASFEP+IDYVVTK+PRF
Sbjct: 302  PRVSRSSALASKATGFPIAKIAAKLAVGYTLDEIKNDITRYTPASFEPTIDYVVTKVPRF 361

Query: 448  AFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLE---CGFS---GWGCSNVKE 501
            AFEKF G++  LTTQMKSVGE MA+GRTFQES QKA+R LE   CG     G    +   
Sbjct: 362  AFEKFRGADDTLTTQMKSVGEVMAIGRTFQESLQKAIRGLEIDRCGLESPLGKRPGDAYA 421

Query: 502  LDWDWEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFL 561
             D + E+++   RVP   R+  +    + G+ VD++H L+ +D WFL + +EL+  E+  
Sbjct: 422  PD-EVERIRAEARVPRAHRLFWLAECFRAGLGVDDVHGLTHVDPWFLREVEELVATER-T 479

Query: 562  LTQSVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEF 621
            L + V   T + F  VKR GFSDK+IA      E EVRE R +LGV P +KRVDTCAAEF
Sbjct: 480  LARGVP-ATAEAFRAVKRMGFSDKRIAQLAGRKEAEVREARHALGVRPVFKRVDTCAAEF 538

Query: 622  EANTPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETI 681
            EA TPY+YS+Y+ ECE+APT + KV+ILGGGPNRIGQGIEFDYCC H SF+L  AG+ETI
Sbjct: 539  EAYTPYLYSTYEEECEAAPTDRPKVMILGGGPNRIGQGIEFDYCCVHASFALSKAGFETI 598

Query: 682  MMNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQY 741
            M+N NPETVSTDYDTSDRLYFEPLT+EDVL ++ +E+P+G+IVQ+GGQTPLKL++P+H  
Sbjct: 599  MVNCNPETVSTDYDTSDRLYFEPLTLEDVLEIVHVEKPKGLIVQYGGQTPLKLAVPLH-- 656

Query: 742  LDEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAI 801
                    A G   V I+GT+PD+ID AEDRERF A+I++L + QP+ G+A+S  +A A+
Sbjct: 657  --------ALG---VPIFGTAPDAIDRAEDRERFAALIEKLGLRQPRNGVARSADEAFAV 705

Query: 802  AKEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDV 861
            A+ IGYP +VRPSYVLGGRAME+VY D  L TYL  AV+   ERPVLID++L DA E+DV
Sbjct: 706  ARRIGYPAMVRPSYVLGGRAMEVVYDDRDLETYLREAVQASNERPVLIDRFLKDAAEVDV 765

Query: 862  DALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVC 921
            D ++D   +V +GG+MEHIE+AG+HSGDSAC +P  ++    +  I   ++ +A+ L V 
Sbjct: 766  DVVSDG-RDVTVGGVMEHIEEAGIHSGDSACALPPYSLRPEHVAEIERQSVAMARELGVI 824

Query: 922  GLMNCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKE 981
            GLMN Q+AI    D+Y+LE NPRASRTVPFV KA G PLAK  AL M GK+L + G +  
Sbjct: 825  GLMNVQFAIQGD-DIYVLEVNPRASRTVPFVGKATGLPLAKAGALCMVGKTLAEAGASAP 883

Query: 982  VIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLS 1041
              P+H SVKEAV PF +F+G D +LGPEM+STGEVMG+   F  AF KAQ AAG  LP++
Sbjct: 884  RRPRHTSVKEAVFPFARFRGVDTVLGPEMKSTGEVMGVSDDFYRAFFKAQAAAGNALPVA 943

Query: 1042 G---TVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRP 1098
            G     F+S+ D  KP +  IA+    +GF+++ST+GTA FL   G+   RV K++EGRP
Sbjct: 944  GEGRRAFVSVRDADKPAVVDIARRLAKLGFEVLSTAGTAAFLAGHGLETTRVRKVNEGRP 1003

Query: 1099 HAGDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLK 1158
               D + +G +  +V T++G   +  D   +RR  L   +P  TT++GA A   A+ + +
Sbjct: 1004 SIVDRIIDGDVHFVVNTTAGKQ-EIADSYSIRRETLMKGLPYFTTLTGARAAVGAMEAAR 1062

Query: 1159 SNTVTMTALQDF 1170
                ++  +Q++
Sbjct: 1063 GGAPSVRTIQEY 1074


>gi|197122523|ref|YP_002134474.1| carbamoyl phosphate synthase large subunit [Anaeromyxobacter sp. K]
 gi|196172372|gb|ACG73345.1| carbamoyl-phosphate synthase, large subunit [Anaeromyxobacter sp. K]
          Length = 1077

 Score = 1294 bits (3349), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 639/1094 (58%), Positives = 815/1094 (74%), Gaps = 29/1094 (2%)

Query: 86   LGKRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGL 145
            + +RTD++KI+I+G+GPIVIGQACEFDYSGTQACKALKEEGYEV+L+NSNPATIMTDPG 
Sbjct: 1    MARRTDIKKIMIVGSGPIVIGQACEFDYSGTQACKALKEEGYEVVLLNSNPATIMTDPGF 60

Query: 146  ADRTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKL 205
            ADRTY+ P+TPE  E +L +E+PD LLPT+GGQTALNLAVALA +GAL ++GVELIGA L
Sbjct: 61   ADRTYVEPITPETAELILAREKPDVLLPTLGGQTALNLAVALARNGALARHGVELIGASL 120

Query: 206  DAIKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGG 265
            +AI+KAEDR LFK+AM+ +GV+ P SG   + +E  +IA +IG FP+IIRP+FT+GG GG
Sbjct: 121  EAIEKAEDRLLFKEAMERVGVELPKSGYATSWEEARAIARDIG-FPIIIRPSFTMGGEGG 179

Query: 266  GIAYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDP 325
            G+AYN EEFE + +  L  S T  +L E+S++GWKEYELEVMRD  DNVVIICSIEN DP
Sbjct: 180  GVAYNLEEFEPLARRALTLSPTHTILCEESIIGWKEYELEVMRDRKDNVVIICSIENFDP 239

Query: 326  MGVHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIE 385
            MGVHTGDSITVAPAQTLTDKEYQR+R+  + IIREIGVE GGSN+QF V+P  G ++VIE
Sbjct: 240  MGVHTGDSITVAPAQTLTDKEYQRMREAGLRIIREIGVETGGSNIQFGVHPKTGRMVVIE 299

Query: 386  MNPRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIP 445
            MNPRVSRSSALASKATGFPIAK+AAKL+VGY+LD+I NDIT+ TPASFEP+IDYVVTK+P
Sbjct: 300  MNPRVSRSSALASKATGFPIAKIAAKLAVGYTLDEIKNDITRYTPASFEPTIDYVVTKVP 359

Query: 446  RFAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLE---CGFS---GWGCSNV 499
            RFAFEKF G++  LTTQMKSVGE MA+GRTFQES QKA+R LE   CG     G    + 
Sbjct: 360  RFAFEKFRGADDTLTTQMKSVGEVMAIGRTFQESLQKAIRGLEIDRCGLESPLGKAPGDA 419

Query: 500  KELDWDWEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQ 559
               D + E+++   RVP   R+  +    + G+ VDE+H ++ +D WFL + +EL+  E+
Sbjct: 420  YAPD-ELERVRAEARVPRAHRLFWLAECFRAGLGVDEVHAITHVDPWFLREVEELVATER 478

Query: 560  FLLTQSVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAA 619
              L + V   + D F  VKR GFSDK+IA      E EVR+ R +LGV P +KRVDTCAA
Sbjct: 479  -TLARGVP-ASADAFRAVKRMGFSDKRIAQLAGRKEAEVRDARHALGVRPVFKRVDTCAA 536

Query: 620  EFEANTPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYE 679
            EFEA TPY+YS+Y+ ECE+APT + KV+ILGGGPNRIGQGIEFDYCC H SF+L  AG+E
Sbjct: 537  EFEAYTPYLYSTYEEECEAAPTDRPKVMILGGGPNRIGQGIEFDYCCVHASFALSKAGFE 596

Query: 680  TIMMNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIH 739
            TIM+N NPETVSTDYDTSDRLYFEPLT+EDVL ++ +E+P+G+IVQ+GGQTPLKL++P+H
Sbjct: 597  TIMVNCNPETVSTDYDTSDRLYFEPLTLEDVLEIVHVEKPKGLIVQYGGQTPLKLAVPLH 656

Query: 740  QYLDEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADAL 799
                      A G   V I+GT+PD+ID AEDRERF A+I++L + QP+ G+A+S  +A 
Sbjct: 657  ----------ALG---VPIFGTAPDAIDRAEDRERFAALIEKLGLRQPRNGVARSADEAF 703

Query: 800  AIAKEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEI 859
            A+A  IGYP +VRPSYVLGGRAME+VY D  L TYL  AV+   ERPVLID++L DA E+
Sbjct: 704  AVAHRIGYPAMVRPSYVLGGRAMEVVYDDRDLETYLREAVQASNERPVLIDRFLKDAAEV 763

Query: 860  DVDALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLN 919
            DVD ++D   +V +GG+MEHIE+AG+HSGDSAC +P  ++S + +  I   ++ +A+ L 
Sbjct: 764  DVDVVSDG-RDVTVGGVMEHIEEAGIHSGDSACALPPYSLSPAHVAEIERQSVAMARELG 822

Query: 920  VCGLMNCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFT 979
            V GLMN Q+AI    D+Y+LE NPRASRTVPFV KA G PLAK  AL M GK+L + G  
Sbjct: 823  VIGLMNVQFAIQGD-DIYVLEVNPRASRTVPFVGKATGLPLAKAGALCMVGKTLAEAGVA 881

Query: 980  KEVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLP 1039
                P+H SVKEAV PF +F+G D +LGPEM+STGEVMG+   F  AF KAQ AAG  LP
Sbjct: 882  GPRRPRHTSVKEAVFPFARFRGVDTVLGPEMKSTGEVMGVSDDFYRAFFKAQAAAGNALP 941

Query: 1040 LSG---TVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEG 1096
            ++G     F+S+ D  KP +  I +    +GF++++T+GTA FL   GI   RV K++EG
Sbjct: 942  VAGEGRRAFVSVRDADKPAVVDIVRRLAKLGFEVLATTGTAAFLAGHGIETTRVRKVNEG 1001

Query: 1097 RPHAGDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRS 1156
            RP   D + +G +  +V T++G   +  D   +RR  L   +P  TT++GA A   A+  
Sbjct: 1002 RPSIVDRIIDGDVHFVVNTTAGKQ-EIADSYSIRRETLMKGLPYFTTLTGARAAVGAMEV 1060

Query: 1157 LKSNTVTMTALQDF 1170
             +    ++  +Q++
Sbjct: 1061 ARGGAPSVRTIQEY 1074


>gi|300113256|ref|YP_003759831.1| carbamoyl-phosphate synthase large subunit [Nitrosococcus watsonii
            C-113]
 gi|299539193|gb|ADJ27510.1| carbamoyl-phosphate synthase, large subunit [Nitrosococcus watsonii
            C-113]
          Length = 1073

 Score = 1293 bits (3345), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 638/1084 (58%), Positives = 813/1084 (75%), Gaps = 20/1084 (1%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KR D+  I+ILGAGPIVIGQACEFDYSG QACK+LKEEGY VIL+NSNPATIMTDPGLAD
Sbjct: 3    KRNDINSIVILGAGPIVIGQACEFDYSGAQACKSLKEEGYRVILVNSNPATIMTDPGLAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+T + V +++EKERPDALLPTMGGQTALN A+ LA  G LE+YGVE+IGA  +A
Sbjct: 63   ATYIEPLTWKTVARIIEKERPDALLPTMGGQTALNCALDLAREGILERYGVEMIGANQEA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDRDLF+QAM+ IG+  P S I ++L+E      ++G FP++IRP+FTLGG+GGGI
Sbjct: 123  INKAEDRDLFRQAMQKIGLDMPRSAIAHSLEEAQQAQRDLG-FPIVIRPSFTLGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEF  IC+ GL  S +S++L+++S+LGWKE+E+EV+RD  DN +IIC+IEN+DPMG
Sbjct: 182  AYNREEFVEICERGLDLSPSSELLIDESVLGWKEFEMEVVRDSKDNCIIICAIENLDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ +RD +IA++REIGVE GGSNVQFAVNP DG +++IEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQVMRDAAIAVLREIGVETGGSNVQFAVNPEDGRLIIIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKK-TPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ N+IT   TPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGYTLDELQNEITGGLTPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            F FEKFP ++  LTTQMKSVGE MA+GR FQES QKALR LE G  G+            
Sbjct: 362  FTFEKFPKADARLTTQMKSVGEVMAIGRNFQESLQKALRGLETGADGFNEKVDLTAKDAA 421

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
            E L+Y LRVP+ DR+  +  A + G  + E++ LS ID WFL Q +ELI VEQ L   S+
Sbjct: 422  ETLRYQLRVPSADRLYYLADAFRAGFSMQEVYGLSHIDPWFLAQIQELIQVEQGLQGISL 481

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
              + KD  Y +KR+GFSD+++A      EKEVR++R +LG+ P YKRVDTC AEF   T 
Sbjct: 482  KQVEKDQLYRLKRQGFSDRRLAILLGVEEKEVRQRRHTLGIRPVYKRVDTCGAEFATTTA 541

Query: 627  YMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSN 686
            Y+YS+YD ECE+AP+Q+ K+++LGGGPNRIGQGIEFDYCC H + +L+  GYETIM+N N
Sbjct: 542  YLYSTYDEECEAAPSQRNKIMVLGGGPNRIGQGIEFDYCCVHAALALREDGYETIMVNCN 601

Query: 687  PETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHR 746
            PETVSTDYDTSDRLYFEPLT+EDVL +I LE+P+G+IVQ+GGQTPLKL+          R
Sbjct: 602  PETVSTDYDTSDRLYFEPLTLEDVLEIISLEQPQGVIVQYGGQTPLKLA----------R 651

Query: 747  LPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEIG 806
               A+G  ++   GTSPDSID AEDRERF  +I++L ++QP    A+++ +AL +A EIG
Sbjct: 652  ALEAAGAPII---GTSPDSIDLAEDRERFQRLIEKLGLKQPPNRTARTQEEALRLAAEIG 708

Query: 807  YPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALAD 866
            YP+VVRPSYVLGGRAMEIVYT + L  Y++ AV V  + PVL+D++L +A E+DVDA+ D
Sbjct: 709  YPLVVRPSYVLGGRAMEIVYTADELARYMKEAVSVSNDSPVLLDRFLDEATEVDVDAICD 768

Query: 867  SCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNC 926
              G V++GGIMEHIEQAGVHSGDSAC +P  +++++  + +      +A+ L V GLMN 
Sbjct: 769  G-GQVMVGGIMEHIEQAGVHSGDSACALPPFSLNAAVQNRLREQVCNMARELKVVGLMNT 827

Query: 927  QYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPKH 986
            Q+AI  + ++Y+LE NPRASRTVPFVSK IG PLAK AA  M G+SL + G  +E+IP +
Sbjct: 828  QFAI-QANEIYVLEVNPRASRTVPFVSKTIGIPLAKIAARCMMGQSLAEQGMIEEIIPHY 886

Query: 987  VSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVFL 1046
             +VKEAV PF KF G D +LGPEM+STGEVMG    F  AF KA + AG  LP  G VF+
Sbjct: 887  FAVKEAVFPFIKFSGVDPILGPEMKSTGEVMGTGRYFGEAFYKALLGAGVVLPQQGKVFI 946

Query: 1047 SLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVAN 1106
            S+ D  K  +  IA+    +GF++++T GT+  L  +G+A  +V K+ EG+PH  DM+ N
Sbjct: 947  SVRDADKQRIIPIAQELSRLGFELLATRGTSAVLGQEGVACLQVNKVLEGQPHIVDMIKN 1006

Query: 1107 GQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTVTMTA 1166
             +I +++ T+ G      D   +RR  L +KV   TTV+GA A  EA+R+  +++V    
Sbjct: 1007 DEIALIINTTEGRKAVS-DSYAIRRSALQHKVTYTTTVAGAWATCEALRAETTDSVYR-- 1063

Query: 1167 LQDF 1170
            LQD 
Sbjct: 1064 LQDL 1067


>gi|389793597|ref|ZP_10196759.1| carbamoyl phosphate synthase large subunit [Rhodanobacter fulvus
            Jip2]
 gi|388433709|gb|EIL90671.1| carbamoyl phosphate synthase large subunit [Rhodanobacter fulvus
            Jip2]
          Length = 1075

 Score = 1292 bits (3344), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 643/1070 (60%), Positives = 805/1070 (75%), Gaps = 26/1070 (2%)

Query: 86   LGKRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGL 145
            + KRTDL+ IL++GAGPIVIGQACEFDYSG QACKALKEEG+ VIL+NSNPATIMTDP  
Sbjct: 1    MAKRTDLKSILVIGAGPIVIGQACEFDYSGAQACKALKEEGFRVILVNSNPATIMTDPET 60

Query: 146  ADRTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKL 205
            AD  YI P+  + VE ++ KERPDA+LPTMGGQTALN A+ LA+ G LEKY VELIGA+ 
Sbjct: 61   ADAVYIEPINWQTVEHIIAKERPDAVLPTMGGQTALNCALDLADHGVLEKYKVELIGARR 120

Query: 206  DAIKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGG 265
            DAI+ AEDR+LFKQAM  IG+++P SG+  + +  + I  ++G FP IIRP+FTLGG+GG
Sbjct: 121  DAIRMAEDRELFKQAMTDIGLESPRSGVAKSFEHALEIQADLG-FPAIIRPSFTLGGSGG 179

Query: 266  GIAYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDP 325
            GIAYNKEEFE I K GL  S T++VL+++SLLGWKE+E+EV+RD ADN +IIC+IEN+DP
Sbjct: 180  GIAYNKEEFELIVKRGLELSPTNEVLIDESLLGWKEFEMEVVRDTADNCIIICAIENLDP 239

Query: 326  MGVHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIE 385
            MGVHTGDSITVAPAQTLTDKEYQRLRD SIA++R+IGV+ GGSNVQF +NP  G V+VIE
Sbjct: 240  MGVHTGDSITVAPAQTLTDKEYQRLRDASIAVLRKIGVDTGGSNVQFGINPDTGRVVVIE 299

Query: 386  MNPRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKK-TPASFEPSIDYVVTKI 444
            MNPRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT   TPASFEP+IDYVVTKI
Sbjct: 300  MNPRVSRSSALASKATGFPIAKIAAKLAVGYTLDELKNDITGGLTPASFEPTIDYVVTKI 359

Query: 445  PRFAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDW 504
            PRFAFEKFP ++  LTTQMKSVGE MA+GRTF ES QKALR LE G +G    N   LD 
Sbjct: 360  PRFAFEKFPSADARLTTQMKSVGEVMAIGRTFHESLQKALRGLEIGKTGL---NPTGLDI 416

Query: 505  DWEQ----LKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQF 560
              E     LK  LR P PDR+  +  A + G+ ++E+  LS +D WFL  F++++  E  
Sbjct: 417  STEDGLATLKRELREPRPDRVFHLADAFRAGLSLEEVFNLSRVDPWFLAAFEDIVLTEGE 476

Query: 561  LLTQSVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAE 620
            + TQ V+ +      E+KR GFSD ++A    S E  +R  R +LGV P YKRVD+CAAE
Sbjct: 477  VATQGVTALDAPRLRELKRLGFSDARLAELLGSDEAALRHLRHTLGVRPVYKRVDSCAAE 536

Query: 621  FEANTPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYET 680
            F  +T YMYS+Y+ ECE+ PT ++K+++LGGGPNRIGQGIEFDYCC H S +L+  GYET
Sbjct: 537  FATSTAYMYSTYEEECEAEPTNREKIIVLGGGPNRIGQGIEFDYCCVHASLALREDGYET 596

Query: 681  IMMNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQ 740
            IM+N NPETVSTDYDTSDRLYFEPLT+EDVL +++LE+P+G+IVQ+GGQTPLKL+     
Sbjct: 597  IMVNCNPETVSTDYDTSDRLYFEPLTLEDVLEIVELEKPKGVIVQYGGQTPLKLA----- 651

Query: 741  YLDEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALA 800
                 R   A+G   V I GTSPDSID AEDRERF  +I+++ ++QP    A++  +ALA
Sbjct: 652  -----RALEAAG---VPIIGTSPDSIDLAEDRERFQKMIEKIGLKQPSNRTARNADEALA 703

Query: 801  IAKEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEID 860
            +A+EIGYP+VVRPSYVLGGRAME+V+ D  L  Y+ +AV+V  + PVL+D++L  A+E+D
Sbjct: 704  LAREIGYPLVVRPSYVLGGRAMEVVHDDADLSRYIRDAVKVSNDSPVLLDRFLDHAVEVD 763

Query: 861  VDALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNV 920
            VD +AD+ G V+IGGIMEHIE+AGVHSGDS+C +P  ++S+S  D +      +A+ L V
Sbjct: 764  VDVIADATGQVLIGGIMEHIEEAGVHSGDSSCSLPPYSLSASLQDELRRQAAAMARELKV 823

Query: 921  CGLMNCQYAITTSGD-VYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFT 979
             GLMN Q+AI   GD VY+LE NPRASRTVPFVSKA G PLAK AA VM+G++L +LG T
Sbjct: 824  VGLMNTQFAI--QGDTVYILEVNPRASRTVPFVSKATGVPLAKIAARVMAGRTLAELGAT 881

Query: 980  KEVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLP 1039
            +EVIP + SVKEA+ PF KFQ  D +LGPEMRSTGEVMG+  SF  AFA+   AAG + P
Sbjct: 882  REVIPSYYSVKEAIFPFLKFQNVDPILGPEMRSTGEVMGVGRSFGAAFARGHEAAGIRTP 941

Query: 1040 LSGTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPH 1099
              G VF+S+ D  K  L  +AK  L  GF +V+TSGTA +L   G+  ER+ K+ EGRPH
Sbjct: 942  PRGKVFVSVRDADKERLLPVAKEVLARGFTLVATSGTASYLAEHGVVCERINKVLEGRPH 1001

Query: 1100 AGDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALA 1149
              D++ NG+I  +V T+ G      D   +RR  L  +V   TTV+GA A
Sbjct: 1002 IVDLIKNGEIVYIVNTTEGKQAIA-DSFSIRREALQRRVTYSTTVAGARA 1050


>gi|226227374|ref|YP_002761480.1| carbamoyl-phosphate synthase large chain [Gemmatimonas aurantiaca
            T-27]
 gi|259585681|sp|C1A4I5.1|CARB_GEMAT RecName: Full=Carbamoyl-phosphate synthase large chain; AltName:
            Full=Carbamoyl-phosphate synthetase ammonia chain
 gi|226090565|dbj|BAH39010.1| carbamoyl-phosphate synthase large chain [Gemmatimonas aurantiaca
            T-27]
          Length = 1094

 Score = 1292 bits (3344), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 648/1105 (58%), Positives = 822/1105 (74%), Gaps = 23/1105 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            +R+DL +IL++G+GPIVIGQA EFDYSGTQA KAL+EEGYEVIL+NSNPATIMTDP  AD
Sbjct: 3    RRSDLHRILVIGSGPIVIGQAAEFDYSGTQAIKALREEGYEVILVNSNPATIMTDPEFAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
            RTY+ P+TPE VE+V+ KERPDA+LPTMGGQTALN+A+AL +SG L KYG ELIGA   A
Sbjct: 63   RTYVEPVTPEFVEKVIAKERPDAVLPTMGGQTALNVALALHDSGVLAKYGCELIGANARA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I+ AEDR LF +AM+ IG++ P      +L+E +S   E G FP IIRP+FTLGGTGGGI
Sbjct: 123  IRVAEDRKLFGEAMEKIGLRCPTGRTVTSLEEALSAVEETG-FPAIIRPSFTLGGTGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEFE I + GL  S    VL+E+SLLGWKEYELEVMRD ADNVVI+CSIEN+DPMG
Sbjct: 182  AYNREEFETIVRRGLDLSPVHSVLIERSLLGWKEYELEVMRDCADNVVIVCSIENLDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPA TLTD+EYQ +RD ++AIIREIGV+ GG N+QFAVNP +GE++VIEMN
Sbjct: 242  VHTGDSITVAPAMTLTDREYQVMRDAAVAIIREIGVDAGGCNIQFAVNPTNGELIVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRF 447
            PRVSRSSALASKATGFPIA++ AKL+VGY+LD++PNDITK TPASFEP +DYV+ K PRF
Sbjct: 302  PRVSRSSALASKATGFPIARIGAKLAVGYTLDEVPNDITKTTPASFEPVLDYVIVKCPRF 361

Query: 448  AFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELD---- 503
            AFEKF  S+P LTTQMKSVGE+MA+GRTF+E+FQKALR+LE G SGW  +   + D    
Sbjct: 362  AFEKFVSSDPGLTTQMKSVGESMAIGRTFKEAFQKALRALETGRSGWTIAERLQDDRLTE 421

Query: 504  WDWEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLT 563
               E+L+ +LR P P+R+  +  AM  GM   E++E++ ID WFL Q +ELID EQ+   
Sbjct: 422  GSKEELRGALRRPTPERIFQLKRAMLLGMDTKELYEITAIDPWFLDQLRELIDAEQWY-- 479

Query: 564  QSVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEA 623
            + ++ +       +KR GFSD+Q+      +E + R +R +LGV PSYK +DTCA EF +
Sbjct: 480  EKLTGVDAVSMRRMKRLGFSDRQLGALRGQSESDARAERWALGVRPSYKMIDTCAGEFPS 539

Query: 624  NTPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMM 683
            +TPY+Y +YD E E+A   +KKV+ILG GPNRIGQG+EFDYCC     +L+  GYETIM+
Sbjct: 540  STPYLYGNYDEESEAATEGRKKVVILGSGPNRIGQGVEFDYCCVRAVLALREQGYETIMV 599

Query: 684  NSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLD 743
            NSNPETVSTD+D SD+LYFEPL++EDVL ++  E+PEG+IVQ GGQTPLKL+ P+     
Sbjct: 600  NSNPETVSTDFDISDKLYFEPLSLEDVLEIVHREQPEGVIVQLGGQTPLKLTRPLE---- 655

Query: 744  EHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAK 803
                  A+G   V+I GTSPD+IDAAEDR RF AI +EL IEQP  G A S  +A+ IA+
Sbjct: 656  ------AAG---VKILGTSPDAIDAAEDRRRFEAIARELGIEQPANGTATSVDEAVTIAQ 706

Query: 804  EIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDA 863
             IG+PV+VRPSYVLGGRAMEIV+ + +L  Y E A  V  ERPVL+D++L DA E DVDA
Sbjct: 707  RIGFPVLVRPSYVLGGRAMEIVHDEVSLRDYFERAARVSEERPVLVDRFLEDAFEADVDA 766

Query: 864  LADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGL 923
            L+D   +VVIG +MEHIE AG+HSGDSAC++P   I ++ +  +   TI  AKRL V GL
Sbjct: 767  LSDGT-DVVIGAVMEHIESAGIHSGDSACILPPYLIPAAAVAQMKEHTIAFAKRLGVVGL 825

Query: 924  MNCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVI 983
            +N QYA    G VY++E NPRASRT PFVSKAIG  L   AA +M G++L ++GFT+E+I
Sbjct: 826  INVQYAY-KDGQVYVIEVNPRASRTAPFVSKAIGVSLPSVAARLMLGETLAEVGFTQEII 884

Query: 984  PKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGT 1043
            P ++SVKEAV PF KF+  D +LGPEMRSTGEVMGID  F  AF K+Q+AA   LP  GT
Sbjct: 885  PPYISVKEAVFPFNKFREFDPVLGPEMRSTGEVMGIDDDFGAAFMKSQLAADNALPREGT 944

Query: 1044 VFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDM 1103
            VF +++D  KP    +A  F  IGF I++TSGTA F   +GI V  VLK+HEGRPH  D 
Sbjct: 945  VFFTVSDGDKPTAASLAGKFHSIGFSIMATSGTAAFFREQGIPVTSVLKVHEGRPHGVDK 1004

Query: 1104 VANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTVT 1163
            + NG++Q++V T  G    Q+D  KLR+  +A ++P  TT++ A A  EAI + ++    
Sbjct: 1005 ILNGEVQLLVNTPLGKHA-QVDDEKLRQAAIANRLPYTTTLTAASAAFEAIAARRTREPV 1063

Query: 1164 MTALQDFFDVETASGSSENLQSVST 1188
            + +LQ++ ++  A G+ E+  + ST
Sbjct: 1064 VRSLQEWHEILRAPGAVESATAGST 1088


>gi|119897673|ref|YP_932886.1| carbamoyl phosphate synthase large subunit [Azoarcus sp. BH72]
 gi|119670086|emb|CAL93999.1| Carbamoyl-phosphate synthase (glutamine-hydrolyzing) [Azoarcus sp.
            BH72]
          Length = 1075

 Score = 1292 bits (3343), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 647/1089 (59%), Positives = 810/1089 (74%), Gaps = 26/1089 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILI+GAGPIVIGQACEFDYSG QACKAL+EEGY+V+L+NSNPATIMTDP  AD
Sbjct: 3    KRTDIKSILIIGAGPIVIGQACEFDYSGAQACKALREEGYKVVLVNSNPATIMTDPETAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+T ++VE+++EKERPDA+LPTMGGQTALN A+ LA  G LEKYGVELIGA  +A
Sbjct: 63   VTYIEPITWQVVERIIEKERPDAVLPTMGGQTALNCALDLARHGVLEKYGVELIGASGEA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  FK AM  IG+ +  SGI ++L+E + +   IG FP+IIRP+FTLGGTGGGI
Sbjct: 123  IDKAEDRLKFKDAMTKIGLGSARSGIAHSLEEALQVQGGIG-FPVIIRPSFTLGGTGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN EEF  ICK GL AS T+++L+E+SLLGWKEYE+EV+RD ADN +I+CSIEN+DPMG
Sbjct: 182  AYNMEEFHDICKRGLEASPTNELLIEESLLGWKEYEMEVVRDRADNCIIVCSIENLDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ LR+ SIA++REIGV+ GGSNVQFA+NP DG ++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQILRNASIAVLREIGVDTGGSNVQFAINPKDGRMIVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT   TPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGYTLDELKNDITGGATPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            FAFEKFP +   LTTQMKSVGE MA+GRTFQESFQKALR LE G  G     + E++ D 
Sbjct: 362  FAFEKFPAANDRLTTQMKSVGEVMAMGRTFQESFQKALRGLEVGVYG-----LDEVEADR 416

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
            E L++ L  P   R+  +  A ++GM  +++H L+ ID WFL Q ++++  E+ L  +S+
Sbjct: 417  EDLEHELANPGAQRIWYVGQAFREGMTQEQVHNLTKIDPWFLAQIEDIVLTEKSLAGRSL 476

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
              M   +  ++K++GFSD++IA    + E  VR +R SLGV P +KRVDTCAAEF  +T 
Sbjct: 477  KAMQAAELRDLKKKGFSDRRIAKLLGTDETAVRLQRHSLGVRPVFKRVDTCAAEFATSTA 536

Query: 627  YMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSN 686
            YMYSSY+ ECE+ PT KKK+++LGGGPNRIGQGIEFDYCC H + +L+  GYETIM+N N
Sbjct: 537  YMYSSYEEECEARPTDKKKIMVLGGGPNRIGQGIEFDYCCVHAALALREDGYETIMVNCN 596

Query: 687  PETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHR 746
            PETVSTDYDTSDRLYFEP+T+ED+L ++ +E+P G+IVQFGGQTPLK +    Q L ++ 
Sbjct: 597  PETVSTDYDTSDRLYFEPITLEDILEIVHIEKPVGVIVQFGGQTPLKRA----QALQDNG 652

Query: 747  LPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEIG 806
            +P         I GTSPD IDAAEDRERF  ++ +L ++QP    A++   A+ +A EIG
Sbjct: 653  VP---------IIGTSPDMIDAAEDRERFQKLLNDLGLKQPPNRTARTPEAAVRLAAEIG 703

Query: 807  YPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALAD 866
            YP+VVRPSYVLGGRAMEIV+  + L  Y+  AV+V  E PVL+D++L+DA E+DVDAL+D
Sbjct: 704  YPLVVRPSYVLGGRAMEIVHEQKDLERYMREAVKVSNESPVLLDRFLNDATEVDVDALSD 763

Query: 867  SCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNC 926
                V+IGGIMEHIEQAGVHSGDSAC +P  T+S+   D +   T  +A+ LNV GLMN 
Sbjct: 764  G-EQVIIGGIMEHIEQAGVHSGDSACSLPPYTLSAKLQDELRRQTEAMARALNVVGLMNV 822

Query: 927  QYAITTSGD---VYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVI 983
            Q+AI   GD   VY+LE NPRASRTVPFVSKA   PLAK AA  M+G+SL   G T EVI
Sbjct: 823  QFAIQGEGDNAVVYVLEVNPRASRTVPFVSKACSLPLAKIAARCMAGQSLASQGVTGEVI 882

Query: 984  PKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGT 1043
            P + SVKEAV PF KF G D +LGPEM+STGEVMG+  SF  AF K+Q+AA  +LP SG 
Sbjct: 883  PPYYSVKEAVFPFVKFPGVDTILGPEMKSTGEVMGVGRSFAEAFVKSQLAASIRLPTSGA 942

Query: 1044 VFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDM 1103
             F+S+    +P    +A+   ++GF +V+T GT   LE  G+ V  V K++EGRPH  DM
Sbjct: 943  AFISVKPTDRPAAVEVARELHELGFSLVATKGTGAALEAAGLPVTAVNKVNEGRPHVVDM 1002

Query: 1104 VANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTVT 1163
            + N +I +++ T         D   +R   LA KV V TT+ GA A    +R L    + 
Sbjct: 1003 IKNNEIALVINTVEEKRQAINDSRSIRTSALAAKVTVYTTIEGARAACMGMRHLSG--LE 1060

Query: 1164 MTALQDFFD 1172
            + A+QD  +
Sbjct: 1061 VYAVQDLHN 1069



 Score =  246 bits (628), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 166/464 (35%), Positives = 253/464 (54%), Gaps = 33/464 (7%)

Query: 52  QLTRYSRSRVRASSAKIDS-SAELSNGAA---SSKDQKLGKR-TDLRKILILGAGPIVIG 106
           +L R+S   VR    ++D+ +AE +   A   SS +++   R TD +KI++LG GP  IG
Sbjct: 509 RLQRHSLG-VRPVFKRVDTCAAEFATSTAYMYSSYEEECEARPTDKKKIMVLGGGPNRIG 567

Query: 107 QACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLADRTYITPMTPELVEQVLEKE 166
           Q  EFDY    A  AL+E+GYE I++N NP T+ TD   +DR Y  P+T E + +++  E
Sbjct: 568 QGIEFDYCCVHAALALREDGYETIMVNCNPETVSTDYDTSDRLYFEPITLEDILEIVHIE 627

Query: 167 RPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDAIKKAEDRDLFKQAMKTIGV 226
           +P  ++   GGQT L  A AL ++      GV +IG   D I  AEDR+ F++ +  +G+
Sbjct: 628 KPVGVIVQFGGQTPLKRAQALQDN------GVPIIGTSPDMIDAAEDRERFQKLLNDLGL 681

Query: 227 KTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGIAYNKEEFEAICKAGLAASL 286
           K PP+    T +  + +A EIG +PL++RP++ LGG    I + +++ E   +  +  S 
Sbjct: 682 KQPPNRTARTPEAAVRLAAEIG-YPLVVRPSYVLGGRAMEIVHEQKDLERYMREAVKVSN 740

Query: 287 TSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMGVHTGDSITVAPAQTLTDKE 346
            S VL+++ L    E +++ + D  + V+I   +E+++  GVH+GDS    P  TL+ K 
Sbjct: 741 ESPVLLDRFLNDATEVDVDALSD-GEQVIIGGIMEHIEQAGVHSGDSACSLPPYTLSAKL 799

Query: 347 YQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGE-----VMVIEMNPRVSRSSALASKAT 401
              LR  + A+ R + V  G  NVQFA+    GE     V V+E+NPR SR+    SKA 
Sbjct: 800 QDELRRQTEAMARALNV-VGLMNVQFAIQ---GEGDNAVVYVLEVNPRASRTVPFVSKAC 855

Query: 402 GFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRFAFEKFPGSEPLLTT 461
             P+AK+AA+   G SL       ++       P   Y   K   F F KFPG + +L  
Sbjct: 856 SLPLAKIAARCMAGQSL------ASQGVTGEVIPP--YYSVKEAVFPFVKFPGVDTILGP 907

Query: 462 QMKSVGEAMALGRTFQESFQKA--LRSLECGFSGWGCSNVKELD 503
           +MKS GE M +GR+F E+F K+    S+    SG    +VK  D
Sbjct: 908 EMKSTGEVMGVGRSFAEAFVKSQLAASIRLPTSGAAFISVKPTD 951


>gi|292493677|ref|YP_003529116.1| carbamoyl-phosphate synthase, large subunit [Nitrosococcus halophilus
            Nc4]
 gi|291582272|gb|ADE16729.1| carbamoyl-phosphate synthase, large subunit [Nitrosococcus halophilus
            Nc4]
          Length = 1073

 Score = 1291 bits (3342), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 642/1084 (59%), Positives = 809/1084 (74%), Gaps = 20/1084 (1%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KR+D++ ILILGAGPIVIGQACEFDYSG QACK+LK EGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRSDIKSILILGAGPIVIGQACEFDYSGAQACKSLKAEGYRVILVNSNPATIMTDPEMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+T E V ++LEKERPDALLPTMGGQTALN A+ LA  G LE+YGVE+IGA  DA
Sbjct: 63   ATYIEPITWETVARILEKERPDALLPTMGGQTALNCALDLAREGILERYGVEMIGASEDA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDRDLF+ AM+ IG+  P S I  +L+E   +  ++G FP+IIRP+FTLGG+GGGI
Sbjct: 123  INKAEDRDLFRLAMQKIGLDVPRSAIAYSLEEAQQVQRDLG-FPIIIRPSFTLGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEF  IC+ GL  S  S++L+E+S+LGWKE+E+EV+RD  DN +IIC+IEN DPMG
Sbjct: 182  AYNREEFVEICERGLDLSPNSELLIEESVLGWKEFEMEVVRDCKDNCIIICAIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ +RD +IA++REIGV+ GGSNVQFA+NP +G +++IEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQIMRDAAIAVLREIGVDTGGSNVQFAINPENGRLIIIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKK-TPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL++GY+LD++ N+IT   TPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKIAAKLAIGYTLDELQNEITGGLTPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            F FEKFP ++  LTTQMKSVGEAMA+GR FQES QKALRSLE G  G+      E +   
Sbjct: 362  FTFEKFPKADARLTTQMKSVGEAMAIGRNFQESLQKALRSLETGADGFNEKLNLEAEDTT 421

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
            E L+Y LRVP+ +R+  +  A + G  + EIHELS ID WFL Q +EL+  EQ L   S+
Sbjct: 422  ETLRYQLRVPSAERIYYLADAFRAGFSMREIHELSHIDPWFLAQIQELVQTEQGLGGLSL 481

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
              + K+  Y +KR+GFSD+++AF     E+E+R +R +LGV P YKRVDTC AEF   T 
Sbjct: 482  EQLGKESLYLLKRKGFSDRRLAFLLGVGEEEIRRRRHALGVRPVYKRVDTCGAEFATTTA 541

Query: 627  YMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSN 686
            Y+YS+YD ECE+AP+Q+ K+++LGGGPNRIGQGIEFDYCC H + +L+  GYETIM+N N
Sbjct: 542  YLYSTYDEECEAAPSQRDKIMVLGGGPNRIGQGIEFDYCCVHAALALREDGYETIMVNCN 601

Query: 687  PETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHR 746
            PETVSTDYDTSDRLYFEPLT+EDVL +I LE+P+G+I+Q+GGQTPLKL+          R
Sbjct: 602  PETVSTDYDTSDRLYFEPLTLEDVLEIIALEQPKGVIIQYGGQTPLKLA----------R 651

Query: 747  LPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEIG 806
               A+G  ++   GTSPDSID AEDRERF  +I+ L  +QP    A+++ +AL +A E+G
Sbjct: 652  ALEAAGAPII---GTSPDSIDLAEDRERFQRLIERLGFKQPPNRTARTQEEALRLADEVG 708

Query: 807  YPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALAD 866
            YP+VVRPSYVLGGRAMEIVY  + L  Y+  AV V  + PVL+D++L +AIE+DVDA+ D
Sbjct: 709  YPLVVRPSYVLGGRAMEIVYNMDELNRYMREAVTVSNDSPVLLDRFLDEAIEVDVDAICD 768

Query: 867  SCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNC 926
                V++GGIMEHIEQAGVHSGDSAC +P  ++S++  D +     K+A+ L V GLMN 
Sbjct: 769  G-ERVIVGGIMEHIEQAGVHSGDSACALPPFSLSAAVQDQLREQVYKMARELKVVGLMNT 827

Query: 927  QYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPKH 986
            Q+AI  + D+Y+LE NPRASRTVPFVSKAIG PLAK AA  M  +SL   G T+EVIP +
Sbjct: 828  QFAI-QANDIYVLEVNPRASRTVPFVSKAIGVPLAKVAARCMMEQSLVSQGITEEVIPHY 886

Query: 987  VSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVFL 1046
             SVKEAV PF KF G D +LGPEM+STGEVMG    F  AF KA + AG  LP  G VF+
Sbjct: 887  FSVKEAVFPFIKFSGVDPILGPEMKSTGEVMGTGRCFGEAFYKALLGAGVVLPQGGKVFI 946

Query: 1047 SLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVAN 1106
            S+ D+ K  +  +A+    +GF++++T GT+  L   G+   RV K+ EG+PH  DM+ N
Sbjct: 947  SVRDVDKQRIVPVAQELATLGFELLATRGTSAVLAQAGVTCTRVNKVLEGQPHIVDMIKN 1006

Query: 1107 GQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTVTMTA 1166
             +I +++ T+ G      D   +RR  L +KVP  TTV+GA A  EA+R    ++V    
Sbjct: 1007 DEIALIINTTEGRKAVS-DSYAIRRSALQHKVPYTTTVAGAWATCEALRVGTIDSV--YG 1063

Query: 1167 LQDF 1170
            LQD 
Sbjct: 1064 LQDL 1067


>gi|46578579|ref|YP_009387.1| carbamoyl-phosphate synthase large subunit [Desulfovibrio vulgaris
            str. Hildenborough]
 gi|120603844|ref|YP_968244.1| carbamoyl-phosphate synthase large subunit [Desulfovibrio vulgaris
            DP4]
 gi|387152060|ref|YP_005700996.1| carbamoyl-phosphate synthase large subunit [Desulfovibrio vulgaris
            RCH1]
 gi|46447990|gb|AAS94646.1| carbamoyl-phosphate synthase, large subunit [Desulfovibrio vulgaris
            str. Hildenborough]
 gi|120564073|gb|ABM29817.1| carbamoyl-phosphate synthase large subunit [Desulfovibrio vulgaris
            DP4]
 gi|311232504|gb|ADP85358.1| carbamoyl-phosphate synthase, large subunit [Desulfovibrio vulgaris
            RCH1]
          Length = 1077

 Score = 1291 bits (3340), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 645/1091 (59%), Positives = 811/1091 (74%), Gaps = 25/1091 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTDL++I+++G+GPI+IGQACEFDYSGTQA KALKEEGYEV+L+NSNPATIMTDPGLAD
Sbjct: 3    KRTDLKRIMVIGSGPIIIGQACEFDYSGTQAVKALKEEGYEVVLVNSNPATIMTDPGLAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
            RTYI P+ PE V  ++ KERPDALLPT+GGQT LN A+ALA SG L++ GVELIGA    
Sbjct: 63   RTYIEPIEPETVAAIIRKERPDALLPTLGGQTGLNTALALAASGVLDECGVELIGANRAV 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I+KAE R+LF+ AM  IG+K P SGI  ++D+   +  E+  FPLIIRPAFT+GGTGGGI
Sbjct: 123  IEKAESRELFRLAMANIGLKVPASGIARSMDDVRRLGTEM-PFPLIIRPAFTMGGTGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN E+ E I   GL AS+TS+V++E+S+LGWKEYE+EVMRD ADN VIICSIEN DPMG
Sbjct: 182  AYNMEDLEEIASRGLTASITSEVMIEQSVLGWKEYEMEVMRDKADNCVIICSIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTD EYQ +RD SIAI+REIGVE GGSNVQF +NP +G+++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDVEYQMMRDASIAIMREIGVETGGSNVQFGINPDNGDMVVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRF 447
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD+IPNDIT++T ASFEP+IDYVVTKIPRF
Sbjct: 302  PRVSRSSALASKATGFPIAKIAAKLAVGYTLDEIPNDITRETMASFEPTIDYVVTKIPRF 361

Query: 448  AFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDWE 507
             FEKFPG+   LTT MKSVGEAM++GRTF+ES QK LRSLE G  G G S  ++   + E
Sbjct: 362  TFEKFPGARDELTTAMKSVGEAMSIGRTFKESLQKGLRSLEVGAPGLG-SRFRDKLPEHE 420

Query: 508  QLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSVS 567
            ++   LR PN  R+  +  AM  GM +D+IHE++ ID WFL Q +EL+D+E  L   +++
Sbjct: 421  EIVAKLRTPNSRRIFYVRLAMLSGMTIDDIHEITNIDPWFLRQMRELVDMEGDLRDFALA 480

Query: 568  N-MTKDD------FYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAE 620
            N MT D+          K  GFSD+Q+A   K  E +VR  R + G+ P+Y  VDTCA+E
Sbjct: 481  NSMTPDNGELVTLLRRAKEYGFSDRQLAEMWKRPESDVRALRDATGIRPTYYLVDTCASE 540

Query: 621  FEANTPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYET 680
            FEA TPY YS+Y+   E     ++KV+ILGGGPNRIGQGIEFDYCCCH SF+L+  G + 
Sbjct: 541  FEAYTPYYYSTYETGHEIEAESRRKVIILGGGPNRIGQGIEFDYCCCHASFALKEMGVQA 600

Query: 681  IMMNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQ 740
            IM+NSNPETVSTDYDTSDRLYFEPLT EDV+++I+ E+P+G+IVQFGGQTPL L++P+ +
Sbjct: 601  IMVNSNPETVSTDYDTSDRLYFEPLTFEDVMHIIEAEKPDGVIVQFGGQTPLNLAVPLQR 660

Query: 741  YLDEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALA 800
                           V I GTSPD+ID AEDRERF A+I +L + QP      +   A+A
Sbjct: 661  -------------AGVPILGTSPDAIDRAEDRERFQALIHKLDLRQPANATVMNLRQAIA 707

Query: 801  IAKEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEID 860
             A  IGYPVVVRPSYVLGGRAMEIVY +E L +Y +N+V   PE P+L+DK+L +A E+D
Sbjct: 708  GANSIGYPVVVRPSYVLGGRAMEIVYDEEQLTSYFQNSVGEAPEHPILLDKFLENATEVD 767

Query: 861  VDALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNV 920
            VDAL+D   +V + GIMEHIE+AG+HSGDSAC IP  ++ SS  D IS  T+ LAK L V
Sbjct: 768  VDALSDGT-DVYVAGIMEHIEEAGIHSGDSACSIPPYSLPSSITDEISRQTVALAKELRV 826

Query: 921  CGLMNCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTK 980
             GLMN Q+A+   G +++LE NPRASRT PFVSKA   PL + A  VM GK+L +L    
Sbjct: 827  VGLMNIQFAV-KDGVIFILEVNPRASRTAPFVSKATAVPLPRLATQVMLGKTLKELDPWS 885

Query: 981  EVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPL 1040
                 +VSVKE+V PF +F G D+LLGPEMRSTGEVMGI  +F  A+ K Q+A GQ+LP 
Sbjct: 886  MRRSGYVSVKESVFPFNRFPGVDILLGPEMRSTGEVMGIAPTFEEAYLKGQLAGGQRLPQ 945

Query: 1041 SGTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHA 1100
             G VF+S+ND  K  +  +A+ F D+GF+IV+T+GTA  L+  G+    V K++EGRP+ 
Sbjct: 946  QGKVFISVNDRDKTLVPDVARIFADLGFEIVATAGTAKLLKEHGVPTTHVNKVYEGRPNI 1005

Query: 1101 GDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSN 1160
             DM+ NG I ++V T+SG    Q D   +R+  L Y VP  TTVSGA A A++I + ++ 
Sbjct: 1006 VDMIKNGDIALVVNTASGKRTVQ-DSKSIRQATLMYGVPYSTTVSGARAIAKSIAASRTC 1064

Query: 1161 TVTMTALQDFF 1171
             V + +LQ+++
Sbjct: 1065 GVNVKSLQEYY 1075


>gi|94266401|ref|ZP_01290098.1| Carbamoyl-phosphate synthase, large subunit, glutamine-dependent
            [delta proteobacterium MLMS-1]
 gi|94268346|ref|ZP_01291150.1| Carbamoyl-phosphate synthase, large subunit, glutamine-dependent
            [delta proteobacterium MLMS-1]
 gi|93451648|gb|EAT02437.1| Carbamoyl-phosphate synthase, large subunit, glutamine-dependent
            [delta proteobacterium MLMS-1]
 gi|93452996|gb|EAT03490.1| Carbamoyl-phosphate synthase, large subunit, glutamine-dependent
            [delta proteobacterium MLMS-1]
          Length = 1077

 Score = 1291 bits (3340), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 645/1085 (59%), Positives = 823/1085 (75%), Gaps = 19/1085 (1%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTDL+KILI+G+GPI+I QACEFDYSGTQA KALKEEGY+V+LINSNPATIMTDP +AD
Sbjct: 3    KRTDLKKILIIGSGPIIISQACEFDYSGTQAVKALKEEGYQVVLINSNPATIMTDPEIAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+TPE V +V+EKERPDALLPT+GGQT LN A+ +AE G LE+YGVEL+ A++D 
Sbjct: 63   ATYIEPITPEFVAKVIEKERPDALLPTLGGQTGLNTAIQVAEMGILEEYGVELLAARIDV 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I+KAE RD F++AM+ IG+K P S I +TL E  + A EIG FP+I+RP++TLGGTGGGI
Sbjct: 123  IRKAEGRDSFREAMRKIGIKVPQSEIIHTLSEAKAAAAEIG-FPIIVRPSYTLGGTGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN++E E +C  GL  SL S+V++EKSLLGWKEYELEVMRD  DNVVIICSIEN DPMG
Sbjct: 182  AYNQQELEKLCITGLDLSLNSEVMLEKSLLGWKEYELEVMRDNKDNVVIICSIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTD+EYQ +RD S+AI+REIGVE GGSNVQFAVNP DGE+MVIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDREYQAMRDASLAIMREIGVETGGSNVQFAVNPADGELMVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRF 447
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD+I NDIT++T ASFEP+IDY V KIPR+
Sbjct: 302  PRVSRSSALASKATGFPIAKIAAKLAVGYTLDEIRNDITRETYASFEPTIDYCVIKIPRW 361

Query: 448  AFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKE--LDWD 505
             FEKFP +E  LTT MKSVGE MA+GRTF+E+ QK LRSLE G SG+G     E   D D
Sbjct: 362  TFEKFPEAEDTLTTAMKSVGETMAIGRTFKEALQKGLRSLEIGISGFGADPKFEKCADLD 421

Query: 506  WEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQS 565
               L+ +LR P+  R+  +Y A+++ +++D++  ++ ID WFL     ++  E  +    
Sbjct: 422  EADLENALRQPSSQRIFQLYEALRRNLEIDQLFAITAIDPWFLHHLAGIVAREGEIRAAG 481

Query: 566  VSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANT 625
               +  +  + VKR GFSD+Q+A+ T ++E ++RE R +LG  P YK VDTCAAEFEA T
Sbjct: 482  FPGLEAELLHRVKRDGFSDRQLAYLTGTSEDDIRELRENLGKKPVYKLVDTCAAEFEAYT 541

Query: 626  PYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNS 685
            PY YS+Y+ E E   T ++KV+ILGGGPNRIGQGIEFDYCC H SF+L+    E+IM+NS
Sbjct: 542  PYYYSTYEQEDEGRETSRRKVMILGGGPNRIGQGIEFDYCCVHASFALREMEIESIMVNS 601

Query: 686  NPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEH 745
            NPETVSTDYDTSDRLYFEPLT EDVLN+I+ E+PEG+IVQFGGQTPL L++P+       
Sbjct: 602  NPETVSTDYDTSDRLYFEPLTREDVLNIIEKEQPEGVIVQFGGQTPLNLAVPL------- 654

Query: 746  RLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEI 805
               + +G   V I GT+PDSID AEDR+RF   +++L++ QP  G+A+S  +ALA+AKEI
Sbjct: 655  ---ARAG---VPILGTTPDSIDRAEDRQRFQQFLQKLNLLQPANGLARSGDEALAVAKEI 708

Query: 806  GYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALA 865
            GYPVVVRPSYVLGGRAM IVY +  L  Y+  AVE  PE PVLIDK+L DA+E+DVDA++
Sbjct: 709  GYPVVVRPSYVLGGRAMRIVYNERDLNQYMTFAVEASPEHPVLIDKFLKDAVEVDVDAIS 768

Query: 866  DSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMN 925
            D   + +IGGIM+HIE+AG+HSGDSAC++P  T+  + ++ I   T  +AK L V GLMN
Sbjct: 769  DG-DSAIIGGIMQHIEEAGIHSGDSACVLPPHTLEPAMIEEIKEATRAMAKELRVKGLMN 827

Query: 926  CQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPK 985
             Q+A+     +++LE NPRASRTVPFVSKA G PLAK A  VM G+SL  LG T E   K
Sbjct: 828  VQFAVQDR-TLFVLEVNPRASRTVPFVSKATGVPLAKLATRVMMGQSLAQLGLTTEREIK 886

Query: 986  HVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVF 1045
            H +VKEAV PF++F   D +LGPEM+STGEVMGID    +AFAK+Q+AAGQK+PL GT+F
Sbjct: 887  HFAVKEAVFPFDRFDNVDTILGPEMKSTGEVMGIDDCVGLAFAKSQLAAGQKIPLQGTIF 946

Query: 1046 LSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVA 1105
            LS+    KP +  +A+   ++G+++V+T+GTA  +  +GIA + V K+ EGRPH  DM+ 
Sbjct: 947  LSVRHPEKPAIVPLARKLSELGYQLVATAGTAELINEQGIACDTVRKISEGRPHVLDMIQ 1006

Query: 1106 NGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTVTMT 1165
            N QIQ +V  S G    + D   +RR  LA+ +P  TT++GA +  +A+ +++   + + 
Sbjct: 1007 NHQIQWIVNISMGTRTTE-DSYTIRRAALAFHLPYTTTLAGAQSMVQALATMRDKNMEVK 1065

Query: 1166 ALQDF 1170
             +Q+F
Sbjct: 1066 PIQEF 1070



 Score =  249 bits (635), Expect = 9e-63,   Method: Compositional matrix adjust.
 Identities = 144/397 (36%), Positives = 228/397 (57%), Gaps = 19/397 (4%)

Query: 87  GKRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLA 146
           G+ T  RK++ILG GP  IGQ  EFDY    A  AL+E   E I++NSNP T+ TD   +
Sbjct: 554 GRETSRRKVMILGGGPNRIGQGIEFDYCCVHASFALREMEIESIMVNSNPETVSTDYDTS 613

Query: 147 DRTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLD 206
           DR Y  P+T E V  ++EKE+P+ ++   GGQT LNLAV LA +      GV ++G   D
Sbjct: 614 DRLYFEPLTREDVLNIIEKEQPEGVIVQFGGQTPLNLAVPLARA------GVPILGTTPD 667

Query: 207 AIKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGG 266
           +I +AEDR  F+Q ++ + +  P +G+  + DE +++A EIG +P+++RP++ LGG    
Sbjct: 668 SIDRAEDRQRFQQFLQKLNLLQPANGLARSGDEALAVAKEIG-YPVVVRPSYVLGGRAMR 726

Query: 267 IAYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPM 326
           I YN+ +        + AS    VL++K L    E +++ + D  D+ +I   +++++  
Sbjct: 727 IVYNERDLNQYMTFAVEASPEHPVLIDKFLKDAVEVDVDAISD-GDSAIIGGIMQHIEEA 785

Query: 327 GVHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEM 386
           G+H+GDS  V P  TL     + +++ + A+ +E+ V+ G  NVQFAV   D  + V+E+
Sbjct: 786 GIHSGDSACVLPPHTLEPAMIEEIKEATRAMAKELRVK-GLMNVQFAVQ--DRTLFVLEV 842

Query: 387 NPRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPR 446
           NPR SR+    SKATG P+AK+A ++ +G SL Q+          + E  I +   K   
Sbjct: 843 NPRASRTVPFVSKATGVPLAKLATRVMMGQSLAQL--------GLTTEREIKHFAVKEAV 894

Query: 447 FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKA 483
           F F++F   + +L  +MKS GE M +      +F K+
Sbjct: 895 FPFDRFDNVDTILGPEMKSTGEVMGIDDCVGLAFAKS 931


>gi|220917308|ref|YP_002492612.1| carbamoyl phosphate synthase large subunit [Anaeromyxobacter
            dehalogenans 2CP-1]
 gi|219955162|gb|ACL65546.1| carbamoyl-phosphate synthase, large subunit [Anaeromyxobacter
            dehalogenans 2CP-1]
          Length = 1077

 Score = 1290 bits (3339), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 636/1094 (58%), Positives = 814/1094 (74%), Gaps = 29/1094 (2%)

Query: 86   LGKRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGL 145
            + +RTD++KI+I+G+GPIVIGQACEFDYSGTQACKALKEEGYEV+L+NSNPATIMTDPG 
Sbjct: 1    MARRTDIKKIMIVGSGPIVIGQACEFDYSGTQACKALKEEGYEVVLLNSNPATIMTDPGF 60

Query: 146  ADRTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKL 205
            ADRTY+ P+TPE  E +L +E+PD LLPT+GGQTALNLAVALA +GAL ++GVELIGA L
Sbjct: 61   ADRTYVEPITPETAELILAREKPDVLLPTLGGQTALNLAVALARNGALARHGVELIGASL 120

Query: 206  DAIKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGG 265
            +AI+KAEDR LFK+AM+ +GV+ P SG   + +E  +IA +IG FP+IIRP+FT+GG GG
Sbjct: 121  EAIEKAEDRLLFKEAMERVGVELPKSGYATSWEEARAIARDIG-FPIIIRPSFTMGGEGG 179

Query: 266  GIAYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDP 325
            G+AYN EEFE + +  L  S T  +L E+S++GWKEYELEVMRD  DNVVIICSIEN DP
Sbjct: 180  GVAYNLEEFEPLARRALTLSPTHTILCEESIIGWKEYELEVMRDRKDNVVIICSIENFDP 239

Query: 326  MGVHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIE 385
            MGVHTGDSITVAPAQTLTDKEYQR+R+  + IIREIGVE GGSN+QF V+P  G ++VIE
Sbjct: 240  MGVHTGDSITVAPAQTLTDKEYQRMREAGLRIIREIGVETGGSNIQFGVHPKTGRMVVIE 299

Query: 386  MNPRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIP 445
            MNPRVSRSSALASKATGFPIAK+AAKL+VGY+LD+I NDIT+ TPASFEP+IDYVVTK+P
Sbjct: 300  MNPRVSRSSALASKATGFPIAKIAAKLAVGYTLDEIKNDITRYTPASFEPTIDYVVTKVP 359

Query: 446  RFAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLE---CGFS---GWGCSNV 499
            RFAFEKF G++  LTTQMKSVGE MA+GRTFQES QKA+R LE   CG     G    + 
Sbjct: 360  RFAFEKFRGADDTLTTQMKSVGEVMAIGRTFQESLQKAIRGLEIDRCGLESPLGKVPGDA 419

Query: 500  KELDWDWEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQ 559
               D + E+++   RVP   R+  +    + G+ VDE+H ++ +D WFL + +E++  E+
Sbjct: 420  YAPD-ELERVRAEARVPRAHRLFWLAECFRAGLGVDEVHAITHVDPWFLREVEEIVATER 478

Query: 560  FLLTQSVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAA 619
              L + V   + D F  VKR GFSD++IA      E EVR+ R +LGV P +KRVDTCAA
Sbjct: 479  -TLARGVP-ASADAFRAVKRMGFSDRRIAQLAGRKEAEVRDARHALGVRPVFKRVDTCAA 536

Query: 620  EFEANTPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYE 679
            EFEA TPY+YS+Y+ ECE+APT + KV+ILGGGPNRIGQGIEFDYCC H SF+L  AG+E
Sbjct: 537  EFEAYTPYLYSTYEEECEAAPTDRPKVMILGGGPNRIGQGIEFDYCCVHASFALSKAGFE 596

Query: 680  TIMMNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIH 739
            TIM+N NPETVSTDYDTSDRLYFEPLT+EDVL ++ +E+P+G+IVQ+GGQTPLKL++P+H
Sbjct: 597  TIMVNCNPETVSTDYDTSDRLYFEPLTLEDVLEIVHVEKPKGLIVQYGGQTPLKLAVPLH 656

Query: 740  QYLDEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADAL 799
                      A G   V I+GT+PD+ID AEDRERF A+I++L + QP+ G+A+S  +A 
Sbjct: 657  ----------ALG---VPIFGTAPDAIDRAEDRERFAALIEKLGLRQPRNGVARSADEAF 703

Query: 800  AIAKEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEI 859
            A+A  IGYP +VRPSYVLGGRAME+VY D  L TYL  AV+   ERPVLID++L DA E+
Sbjct: 704  AVAHRIGYPAMVRPSYVLGGRAMEVVYDDRDLETYLREAVQASNERPVLIDRFLKDAAEV 763

Query: 860  DVDALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLN 919
            DVD ++D   +V +GG+MEHIE+AG+HSGDSAC +P  ++    +  I   ++ +A+ L 
Sbjct: 764  DVDVVSDG-RDVTVGGVMEHIEEAGIHSGDSACALPPYSLRPEHVAEIERQSVAMARELG 822

Query: 920  VCGLMNCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFT 979
            V GLMN Q+AI    D+Y+LE NPRASRTVPFV KA G PLAK  AL M GK+L + G  
Sbjct: 823  VIGLMNVQFAIQGD-DIYVLEVNPRASRTVPFVGKATGLPLAKAGALCMVGKTLAEAGVA 881

Query: 980  KEVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLP 1039
                P+H SVKEAV PF +F+G D +LGPEM+STGEVMG+   F  AF KAQ AAG  LP
Sbjct: 882  GPRRPRHTSVKEAVFPFARFRGVDTVLGPEMKSTGEVMGVSDDFYRAFFKAQAAAGNALP 941

Query: 1040 LSG---TVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEG 1096
            ++G     F+S+ D  KP +  I +    +GF++++T+GTA FL   GI   RV K++EG
Sbjct: 942  VAGEGRRAFVSVRDADKPAVVDIVRRLAKLGFEVLATTGTAAFLAGHGIETTRVRKVNEG 1001

Query: 1097 RPHAGDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRS 1156
            RP   D + +G +  +V T++G   +  D   +RR  L   +P  TT++GA A   A+ +
Sbjct: 1002 RPSIVDRIIDGDVHFVVNTTAGKQ-EIADSYSIRRETLMKGLPYFTTLTGARAAVGAMEA 1060

Query: 1157 LKSNTVTMTALQDF 1170
             +    ++  +Q++
Sbjct: 1061 ARGGAPSVRTIQEY 1074


>gi|115375436|ref|ZP_01462697.1| carbamoyl-phosphate synthase, large subunit [Stigmatella aurantiaca
            DW4/3-1]
 gi|310821115|ref|YP_003953473.1| carbamoyl-phosphate synthase large chain [Stigmatella aurantiaca
            DW4/3-1]
 gi|115367563|gb|EAU66537.1| carbamoyl-phosphate synthase, large subunit [Stigmatella aurantiaca
            DW4/3-1]
 gi|309394187|gb|ADO71646.1| Carbamoyl-phosphate synthase large chain [Stigmatella aurantiaca
            DW4/3-1]
          Length = 1081

 Score = 1288 bits (3332), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 632/1093 (57%), Positives = 812/1093 (74%), Gaps = 18/1093 (1%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KR+D+RK+L++G+GPI+IGQA EFDYSGTQA KAL++EG EV+L+NSNPAT+MTDP  A 
Sbjct: 3    KRSDIRKVLVIGSGPIIIGQAVEFDYSGTQAIKALRDEGVEVVLLNSNPATVMTDPEFAH 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
            RTYI P++ E  E++L  ERPD+LLPTMGGQTALNLA ALAE G LEKYGV LIGA L+A
Sbjct: 63   RTYIEPISVESAEKILAAERPDSLLPTMGGQTALNLAKALAEQGILEKYGVRLIGASLEA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR LFK AM+ IGV  P SG   T+DE +S+  EIG FP IIRP+FTLGGTGGGI
Sbjct: 123  INKAEDRQLFKAAMQKIGVALPKSGYARTIDEALSLVEEIG-FPAIIRPSFTLGGTGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EE+E IC++GL AS TS +LVE+S+LGWKEYELEV+RD ADNV+I+CSIEN+DPMG
Sbjct: 182  AYNREEYETICRSGLKASPTSTILVEESVLGWKEYELEVVRDSADNVIIVCSIENLDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAP+QTLTD+EYQR+R  S+AIIREIGVE GGSN+QF ++P DG ++VIEMN
Sbjct: 242  VHTGDSITVAPSQTLTDREYQRMRQASLAIIREIGVETGGSNIQFGIHPRDGRMVVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRF 447
            PRVSRSSALASKATG+PIAK+AAKL++GY+LD++ NDIT+ TPASFEP+IDYVV KIPRF
Sbjct: 302  PRVSRSSALASKATGYPIAKVAAKLALGYTLDELRNDITRDTPASFEPTIDYVVVKIPRF 361

Query: 448  AFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDWE 507
            AFEKFP +   LTT M+SVGE MA+GRTF E++ KALRS+E G        +     + E
Sbjct: 362  AFEKFPKANRTLTTSMRSVGEVMAMGRTFSEAYMKALRSMELGRLELEPPELPTEKEERE 421

Query: 508  Q-LKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
            + L+ +LRVP P+R   +  A ++G+ V+++H+LS ID WFL + + L+   Q L     
Sbjct: 422  KVLREALRVPRPERPWFVAQAFREGLSVEQVHDLSAIDPWFLRKIESLVHRAQSLQEFGR 481

Query: 567  SNMTKDD-FYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANT 625
             +   DD   E K  GFSDK +       + EVR  R + G+ P YKRVDTCAAEFEA T
Sbjct: 482  LDQIPDDVLREAKANGFSDKYLGQLLGYPDSEVRAHRQARGIQPVYKRVDTCAAEFEAYT 541

Query: 626  PYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNS 685
            PY+YS+Y+ E E+ PT+++KVLILG GP RIGQGIEFDYCC H +F+L+ AGYET+M+N 
Sbjct: 542  PYLYSTYEEEDEAPPTERQKVLILGSGPIRIGQGIEFDYCCVHAAFALREAGYETVMVNC 601

Query: 686  NPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEH 745
            NPETVSTDYDTSDRLYFEPLT+E+VL V   E+P G IVQFGGQTPLKLS+P+ +     
Sbjct: 602  NPETVSTDYDTSDRLYFEPLTIENVLEVSQREKPIGAIVQFGGQTPLKLSVPLEK----- 656

Query: 746  RLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEI 805
                    G + I GTSPD+ID AEDRERF A+I++L + QP+ G+A+S  +A  IA+ I
Sbjct: 657  --------GGLPILGTSPDAIDRAEDRERFAALIEKLGLTQPENGVARSHDEAFRIAERI 708

Query: 806  GYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALA 865
            GYPV+VRPSYVLGGRAME VY   +L  Y+  AV   PE PVLID++L DA E+D+D +A
Sbjct: 709  GYPVMVRPSYVLGGRAMESVYDASSLERYMREAVSASPEHPVLIDRFLKDATEVDLDLVA 768

Query: 866  DSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMN 925
            D  G V++GG++EHI++AGVHSGD+A  +P  ++S   ++ +    I LA+ L V GLMN
Sbjct: 769  DRTGAVLVGGVLEHIQEAGVHSGDAAATLPPHSLSPDLVERMKDQAISLARELKVVGLMN 828

Query: 926  CQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPK 985
             Q+AI     +Y+LE NPRASRTVPF+SKA G PLAK AAL M GK+L +LG T+E   K
Sbjct: 829  VQFAIQGK-TIYILEVNPRASRTVPFISKATGVPLAKLAALCMVGKTLAELGHTQEPEFK 887

Query: 986  HVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVF 1045
            HV+VKE+V PF +F G DV+LGPEM+STGEVMG+   +P AFAK+Q+AAG KLP SG VF
Sbjct: 888  HVAVKESVFPFARFSGVDVILGPEMKSTGEVMGLADDYPSAFAKSQLAAGVKLPRSGRVF 947

Query: 1046 LSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVA 1105
            +S+ D  KP +  +A+    +GF++V+TSGT  +L  KGI  ++V K+ EGRP+  D + 
Sbjct: 948  ISVKDEDKPAVVDLARRLRSMGFELVATSGTHAYLAKKGIEAQQVQKVKEGRPNIVDKIV 1007

Query: 1106 NGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTVTMT 1165
            +G I +++ T+ G   +  D   +RR  L + +P  TTV  A     A+ +L+ + + + 
Sbjct: 1008 DGAIVLVINTTFGKQ-EIADSFSIRREALMHGIPYYTTVQQARMVVGALEALRRSELGVK 1066

Query: 1166 ALQDFFDVETASG 1178
             LQD+  +  + G
Sbjct: 1067 PLQDYLRISRSPG 1079


>gi|386022063|ref|YP_005940088.1| carbamoyl phosphate synthase large subunit [Pseudomonas stutzeri DSM
            4166]
 gi|327482036|gb|AEA85346.1| carbamoyl phosphate synthase large subunit [Pseudomonas stutzeri DSM
            4166]
          Length = 1073

 Score = 1288 bits (3332), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 635/1085 (58%), Positives = 816/1085 (75%), Gaps = 22/1085 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILILGAGPIVIGQACEFDYSG QACKALKEEG+ VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIKSILILGAGPIVIGQACEFDYSGAQACKALKEEGFRVILVNSNPATIMTDPAMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+    V +++EKERPDALLPTMGGQTALN A+ L + G LEK+GVE+IGA  D 
Sbjct: 63   ATYIEPIKWATVAKIIEKERPDALLPTMGGQTALNCALDLEKHGVLEKFGVEMIGANADT 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  F +AMK IG+  P SGI + ++E  ++ +++G FP IIRP+FT+GGTGGGI
Sbjct: 123  IDKAEDRSRFDKAMKNIGLACPESGIAHNMEEAYAVLDKVG-FPCIIRPSFTMGGTGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEFE IC  GL  S TS++L+++SL+GWKEYE+EV+RD  DN +I+CSIEN DPMG
Sbjct: 182  AYNREEFEEICARGLDLSPTSELLIDESLIGWKEYEMEVVRDKKDNCIIVCSIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGVE GGSNVQF + P  G ++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQIMRNASLAVLREIGVETGGSNVQFGICPNTGRMVVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT  +TPASFEP+IDYVVTK+PR
Sbjct: 302  PRVSRSSALASKATGFPIAKIAAKLAVGYTLDELSNDITGGRTPASFEPAIDYVVTKVPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            FAFEKFP ++  LTTQMKSVGE MA+GRTFQES QKALR LE G +G+    +   D + 
Sbjct: 362  FAFEKFPKADARLTTQMKSVGEVMAIGRTFQESMQKALRGLEVGATGFD-PKLNLADAEA 420

Query: 507  EQ-LKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQS 565
            E  LK  L VP  DR+  +  A + G  V+++  L+ ID WFL Q ++L+  E+ + T  
Sbjct: 421  ESTLKRELTVPGADRIWFVADAFRAGKSVEDVFALTNIDPWFLVQIEDLVKDEEQVKTLG 480

Query: 566  VSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANT 625
            +S++ +D  Y++KR+GFSD ++A     TEK +R  R  L V+P YKRVDTCAAEF  +T
Sbjct: 481  LSSIDRDLMYKLKRKGFSDARLAKLLGVTEKNLRSHRHKLKVLPVYKRVDTCAAEFATDT 540

Query: 626  PYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNS 685
             YMYS+Y+ ECE+ P+ ++K++ILGGGPNRIGQGIEFDYCC H + +++  GYETIM+N 
Sbjct: 541  AYMYSTYEEECEANPSSREKIMILGGGPNRIGQGIEFDYCCVHAALAMREDGYETIMVNC 600

Query: 686  NPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEH 745
            NPETVSTDYDTSDRLYFEP+T+EDVL ++ +E+P+G+IVQ+GGQTPLK    I + L+E 
Sbjct: 601  NPETVSTDYDTSDRLYFEPVTLEDVLEIVRVEQPKGVIVQYGGQTPLK----ICRALEEA 656

Query: 746  RLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEI 805
             +P         I GTSPD+ID AEDRERF  +++ L++ QP+   A+SE +A+A +K I
Sbjct: 657  GVP---------IIGTSPDAIDRAEDRERFQQMVQRLNLRQPQNATARSEEEAIAASKAI 707

Query: 806  GYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALA 865
            GYP+VVRPSYVLGGRAMEIVY +E L  Y+  AV+V  + PVL+D +L+ AIE+DVDA+ 
Sbjct: 708  GYPLVVRPSYVLGGRAMEIVYEEEELKRYMREAVQVSNDSPVLLDHFLNCAIEVDVDAVC 767

Query: 866  DSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMN 925
            D    VVIGGIM+HIEQAGVHSGDSAC +P  ++     D I     K+A  L+V GLMN
Sbjct: 768  DG-ETVVIGGIMQHIEQAGVHSGDSACSLPAYSLPQHIQDEIREQVRKMALELDVVGLMN 826

Query: 926  CQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPK 985
             Q A+    D+Y+LE NPRASRTVPFVSK IG  LAK AA VM+GKSL ++GFT+E+IP 
Sbjct: 827  VQMAVQGE-DIYVLEVNPRASRTVPFVSKCIGESLAKVAARVMAGKSLAEVGFTREIIPT 885

Query: 986  HVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVF 1045
            + SVKEAV PF KF G D +LGPEM+STGEVMG+  SF  AFAKAQ+ A + LP+SG  F
Sbjct: 886  YFSVKEAVFPFAKFPGVDTILGPEMKSTGEVMGVGDSFAEAFAKAQLGASEILPISGCAF 945

Query: 1046 LSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVA 1105
            LS+ +  KP++E++A+  + +GF++V+T+GTA  +E  G+ V RV K+ EGRPH  DM+ 
Sbjct: 946  LSVREDDKPYVEQVARDLVGLGFEVVATAGTARIIEAAGLPVRRVNKVTEGRPHVVDMIK 1005

Query: 1106 NGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTVTMT 1165
            N ++ +++ T+ G      D   +RR  L +K+ + TT++G  A  EA++     TV   
Sbjct: 1006 NDEVTLIINTTEGRQ-SIADSYSIRRNALQHKICITTTIAGGQAICEALKFGPEKTVRR- 1063

Query: 1166 ALQDF 1170
             LQD 
Sbjct: 1064 -LQDL 1067


>gi|431926142|ref|YP_007239176.1| carbamoyl-phosphate synthase large subunit [Pseudomonas stutzeri
            RCH2]
 gi|431824429|gb|AGA85546.1| carbamoyl-phosphate synthase large subunit [Pseudomonas stutzeri
            RCH2]
          Length = 1073

 Score = 1287 bits (3331), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 636/1085 (58%), Positives = 815/1085 (75%), Gaps = 22/1085 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILILGAGPIVIGQACEFDYSG QACKALKEEG+ VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIKSILILGAGPIVIGQACEFDYSGAQACKALKEEGFRVILVNSNPATIMTDPSMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+    V +++EKERPDALLPTMGGQTALN A+ L + G L K+GVE+IGA  D 
Sbjct: 63   ATYIEPIKWATVAKIIEKERPDALLPTMGGQTALNCALDLEKHGVLAKFGVEMIGANADT 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  F +AMK IG+  P SGI + ++E   + +++G FP IIRP+FT+GGTGGGI
Sbjct: 123  IDKAEDRSRFDKAMKDIGLACPVSGIAHNMEEAYGVLDKVG-FPCIIRPSFTMGGTGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEFE IC  GL  S TS++L+++SL+GWKEYE+EV+RD  DN +I+CSIEN DPMG
Sbjct: 182  AYNREEFEEICARGLDLSPTSELLIDESLIGWKEYEMEVVRDKKDNCIIVCSIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ LR+ S+A++REIGVE GGSNVQF + P  G ++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQILRNASLAVLREIGVETGGSNVQFGICPNTGRMVVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT  +TPASFEP+IDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKIAAKLAVGYTLDELSNDITGGRTPASFEPAIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            FAFEKFP ++  LTTQMKSVGE MA+GRTFQES QKALR LE G +G+    +   D + 
Sbjct: 362  FAFEKFPKADARLTTQMKSVGEVMAIGRTFQESMQKALRGLEVGATGFD-PKLNLADAEA 420

Query: 507  EQ-LKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQS 565
            E  LK  L VP  DR+  +  A + G  V E+ EL+ ID+WFL Q ++L+  E+ + T  
Sbjct: 421  ESTLKRELTVPGADRIWFVADAFRAGKTVAEVFELTRIDEWFLVQIEDLVRDEEHVKTLG 480

Query: 566  VSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANT 625
            +S++ +D  Y++KR+GFSD ++A     TEK +R  R  L V+P YKRVDTCAAEF  +T
Sbjct: 481  LSSIDRDLMYKLKRKGFSDARLAKLLGVTEKNLRSHRHKLKVLPVYKRVDTCAAEFATDT 540

Query: 626  PYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNS 685
             YMYS+Y+ ECE+ P+ ++K++ILGGGPNRIGQGIEFDYCC H + +++  GYETIM+N 
Sbjct: 541  AYMYSTYEEECEANPSSREKIMILGGGPNRIGQGIEFDYCCVHAALAMREDGYETIMVNC 600

Query: 686  NPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEH 745
            NPETVSTDYDTSDRLYFEP+T+EDVL ++ +E+P+G+IVQ+GGQTPLK    I + L+E 
Sbjct: 601  NPETVSTDYDTSDRLYFEPVTLEDVLEIVRVEQPKGVIVQYGGQTPLK----ICRALEEA 656

Query: 746  RLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEI 805
             +P         I GTSPD+ID AEDRERF  +++ L++ QP+   A+SE +A+A +K I
Sbjct: 657  GVP---------IIGTSPDAIDRAEDRERFQQMVQRLNLRQPQNATARSEEEAIAASKAI 707

Query: 806  GYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALA 865
            GYP+VVRPSYVLGGRAMEIVY +E L  Y+  AV+V  + PVL+D +L+ AIE+D+DA+ 
Sbjct: 708  GYPLVVRPSYVLGGRAMEIVYEEEELKRYMREAVQVSNDSPVLLDHFLNCAIEVDIDAVC 767

Query: 866  DSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMN 925
            D   +VVIGGIM+HIEQAGVHSGDSAC +P  ++     D I     K+A  L+V GLMN
Sbjct: 768  DGT-DVVIGGIMQHIEQAGVHSGDSACSLPAYSLPQHIQDEIRDQVRKMALELDVIGLMN 826

Query: 926  CQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPK 985
             Q A+    D+Y+LE NPRASRTVPFVSK IG  LAK AA VM+GK+L ++GFT+E+IP 
Sbjct: 827  VQMAVQGE-DIYVLEVNPRASRTVPFVSKCIGESLAKVAARVMAGKTLKEIGFTREIIPT 885

Query: 986  HVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVF 1045
            + SVKEAV PF KF G D +LGPEM+STGEVMG+  SF  AFAKAQ+ A + LP SG  F
Sbjct: 886  YYSVKEAVFPFAKFPGVDTILGPEMKSTGEVMGVGDSFAEAFAKAQLGASEILPTSGCAF 945

Query: 1046 LSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVA 1105
            LS+ +  KP++E++A+  + +GF++V+T+GTA  +E  G+ V RV K+ EGRPH  DM+ 
Sbjct: 946  LSVREDDKPYVEQVARDLVGLGFEVVATAGTARIIEAAGLPVRRVNKVTEGRPHVVDMIK 1005

Query: 1106 NGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTVTMT 1165
            N ++ +++ T+ G      D   +RR  L +K+ + TT++G  A  EA++     TV   
Sbjct: 1006 NDEVTLVINTTEGRQ-SIADSYSIRRNALQHKICITTTIAGGQAICEALKFGPEKTVRR- 1063

Query: 1166 ALQDF 1170
             LQD 
Sbjct: 1064 -LQDL 1067


>gi|319778421|ref|YP_004129334.1| carbamoyl-phosphate synthase large subunit [Taylorella equigenitalis
            MCE9]
 gi|397662202|ref|YP_006502902.1| carbamoyl-phosphate synthase large subunit [Taylorella equigenitalis
            ATCC 35865]
 gi|317108445|gb|ADU91191.1| Carbamoyl-phosphate synthase large chain [Taylorella equigenitalis
            MCE9]
 gi|394350381|gb|AFN36295.1| carbamoyl-phosphate synthase large chain [Taylorella equigenitalis
            ATCC 35865]
          Length = 1081

 Score = 1287 bits (3330), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 646/1079 (59%), Positives = 815/1079 (75%), Gaps = 29/1079 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTDL+ ILI+GAGPIVIGQACEFDYSG QACKALK EGY  IL+NSNPATIMTDP  AD
Sbjct: 3    KRTDLKNILIIGAGPIVIGQACEFDYSGAQACKALKAEGYRTILVNSNPATIMTDPETAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
              YI P+T + +E+V+E E+PDA+LPTMGGQTALN A+ LA+ G LEK+GVELIGA   A
Sbjct: 63   VIYIEPITWKSLEKVIEIEKPDAILPTMGGQTALNCALELAKQGVLEKHGVELIGANAHA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECIS----IANEIGE--FPLIIRPAFTLG 261
            I+KAEDR  FK+AM +IG+++  SGI +++DE       IA EIG   FP++IRP+FTLG
Sbjct: 123  IEKAEDRMKFKEAMSSIGLESAKSGIAHSMDEAWDVQRRIAEEIGTAGFPVVIRPSFTLG 182

Query: 262  GTGGGIAYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIE 321
            GTGGGIAYN EEFEAIC  GL AS T+++L+E+SLLGWKE+E+EV+RD ADN +IICSIE
Sbjct: 183  GTGGGIAYNPEEFEAICMRGLEASPTNELLIEESLLGWKEFEMEVVRDKADNCIIICSIE 242

Query: 322  NVDPMGVHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEV 381
            N+DPMGVHTGDSITVAPAQTLTDKEYQ +R+ SIA++REIGV+ GGSNVQFAVNP +G +
Sbjct: 243  NLDPMGVHTGDSITVAPAQTLTDKEYQIMRNASIAVLREIGVDTGGSNVQFAVNPANGRM 302

Query: 382  MVIEMNPRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITK-KTPASFEPSIDYV 440
            +VIEMNPRVSRSSALASKATGFPIAK+A++L+VGY+LD++ N+IT   TPASFEP++DYV
Sbjct: 303  IVIEMNPRVSRSSALASKATGFPIAKVASRLAVGYTLDELLNEITGGATPASFEPTLDYV 362

Query: 441  VTKIPRFAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVK 500
            VTKIPRFAFEKFP ++  LTTQMKSVGE MA+GRTF+ESFQKALR LE G  G     V 
Sbjct: 363  VTKIPRFAFEKFPQADSRLTTQMKSVGEVMAIGRTFKESFQKALRGLEVGVDGLNLKTV- 421

Query: 501  ELDWDWEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQF 560
                D E+L+  L  P P+R+  +  A  +G  +D++H L+ ID WFL Q KE++D+E  
Sbjct: 422  ----DLEKLQVELAEPGPERIWFVADAFDRGFSIDDVHRLTKIDLWFLEQIKEIVDIELA 477

Query: 561  LLTQSVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAE 620
            L  +++  +  +    +KR GFSD+++A+   ++E E+R+ R+  GV P YKRVDTCAAE
Sbjct: 478  LEQKTLGEIDAEVMRLLKREGFSDRRLAYLLDTSETEIRKIRIQQGVRPVYKRVDTCAAE 537

Query: 621  FEANTPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYET 680
            F+  T YMYS+Y+ E E+ PTQK+K+++LGGGPNRIGQGIEFDYCC H + SL+  GYET
Sbjct: 538  FDTKTAYMYSTYEEESEALPTQKQKIMVLGGGPNRIGQGIEFDYCCVHAALSLKQDGYET 597

Query: 681  IMMNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQ 740
            IM+N NPETVSTDYDT+DRLYFEPLT+EDVL ++D+E+P G+IVQ+GGQTPLKL+    +
Sbjct: 598  IMVNCNPETVSTDYDTADRLYFEPLTLEDVLEIVDIEKPVGVIVQYGGQTPLKLA----R 653

Query: 741  YLDEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALA 800
             L+ + +P         I GTSP+SID AEDRERF  ++++L+++QP    A++E +AL 
Sbjct: 654  DLELNGVP---------ILGTSPESIDIAEDRERFQKLLQKLNLKQPPNRTARTEEEALT 704

Query: 801  IAKEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEID 860
            +AKEIGYP+VVRPSYVLGGRAMEIV+    L  Y+  AV+V  + PVL+D+YL+DAIE+D
Sbjct: 705  LAKEIGYPLVVRPSYVLGGRAMEIVHDQMDLERYMTAAVKVSNDSPVLLDRYLNDAIEVD 764

Query: 861  VDALADSCGN-VVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLN 919
            VD + D  GN V I G+MEHIEQAGVHSGDSAC IP  ++S   +D I   T  +AK LN
Sbjct: 765  VDCICD--GNEVFIAGVMEHIEQAGVHSGDSACSIPPHSLSKEIVDEIKRQTRLMAKALN 822

Query: 920  VCGLMNCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFT 979
            V GLMN Q+AI  S +VY+LE NPRASRTVPFVSKA G P+AK AA VM+GKSL +LG T
Sbjct: 823  VRGLMNVQFAI-QSNEVYVLEVNPRASRTVPFVSKATGLPVAKIAARVMAGKSLEELGVT 881

Query: 980  KEVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLP 1039
            +E IP    VKEAV PF KF G D +LGPEM+STGEVMG+  +F  AF K+QIAAG  LP
Sbjct: 882  EEKIPNFYCVKEAVFPFAKFPGVDTILGPEMKSTGEVMGVGETFGEAFVKSQIAAGIDLP 941

Query: 1040 LSGTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPH 1099
             +G VFLS+ D  KP L  IAK  L++GFKI +T GTA  +   GI V+ V K+ EGRPH
Sbjct: 942  QAGLVFLSVKDSDKPKLIPIAKGLLELGFKICATRGTASAIYEAGIPVQVVNKVTEGRPH 1001

Query: 1100 AGDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLK 1158
              DM+ NG++ +++ T         D   +R   L  +V   TT++ A A  E ++ L+
Sbjct: 1002 IVDMLKNGELNLVINTVEEKRNAINDSRSIRTNALGARVTAYTTIAEASAAVEGLKYLR 1060


>gi|237745680|ref|ZP_04576160.1| carbamoyl-phosphate synthase subunit large [Oxalobacter formigenes
            HOxBLS]
 gi|229377031|gb|EEO27122.1| carbamoyl-phosphate synthase subunit large [Oxalobacter formigenes
            HOxBLS]
          Length = 1076

 Score = 1287 bits (3330), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 647/1083 (59%), Positives = 822/1083 (75%), Gaps = 28/1083 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILI+GAGPI+IGQACEFDYSG QACKAL+EEGY+VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIKSILIIGAGPIIIGQACEFDYSGAQACKALREEGYKVILVNSNPATIMTDPNMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             T+I P+T ++VE+++EKERPDA+LPTMGGQTALN A+ L  +G LEKY VELIGA  +A
Sbjct: 63   VTFIEPITWKVVERIIEKERPDAILPTMGGQTALNCALDLYRNGVLEKYHVELIGASPEA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  FK+AM  IG+ +  SGI +TLDE   +  ++G FP+IIRP+FTLGGTGGGI
Sbjct: 123  IDKAEDRSKFKEAMTRIGLSSARSGIAHTLDEAWDVQKKMG-FPVIIRPSFTLGGTGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEF+AIC+ GL AS TS++L+E+SL+GWKEYE+EV+RD ADN +I+CSIEN+DPMG
Sbjct: 182  AYNEEEFDAICRRGLEASPTSELLIEESLIGWKEYEMEVVRDRADNCIIVCSIENLDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ +R+ SIAI+REIGV+ GGSNVQFAVNP DG ++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQLMRNASIAILREIGVDTGGSNVQFAVNPKDGRMIVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITK-KTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VG++LD++ N+IT   TPASFEPSIDYVVTK+PR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGFTLDELRNEITGGATPASFEPSIDYVVTKVPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            F FEKFP ++P LTTQMKSVGE MA+GRTFQESFQKALR LE G  G     + E   D 
Sbjct: 362  FTFEKFPSADPHLTTQMKSVGEVMAIGRTFQESFQKALRGLEVGVEG-----MNEKTTDH 416

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
            E +K  L  P P+R+  +  A  +G  ++E+H L+ ID WFL Q KE++D+E +L  Q +
Sbjct: 417  EVIKEELGEPGPERIWYVGDAFAQGFTLEEVHNLTHIDPWFLAQIKEIVDIELWLDHQKL 476

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
              + +D  +++K++GFSDK++A+  K+T+K +R+KR    + P YKRVDTCAAEF  NT 
Sbjct: 477  DELDRDTLFKLKQKGFSDKRLAWLLKTTDKVIRDKRHGWNIRPVYKRVDTCAAEFATNTA 536

Query: 627  YMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSN 686
            YMYS+YD ECE+ PT KKK+++LGGGPNRIGQGIEFDYCC H + +++  GYETIM+N N
Sbjct: 537  YMYSTYDEECEAEPTDKKKIMVLGGGPNRIGQGIEFDYCCVHAAMAMREDGYETIMVNCN 596

Query: 687  PETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHR 746
            PETVSTDYD SDRLYFEPLT+EDVL ++D E+P G+IVQ+GGQTPLKL+L +        
Sbjct: 597  PETVSTDYDISDRLYFEPLTLEDVLEIVDKEKPYGVIVQYGGQTPLKLALDLE------- 649

Query: 747  LPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEIG 806
               A+G   V I GTSPD IDAAEDRERF  ++KEL++ QP    A++E +A+ +A+EIG
Sbjct: 650  ---ANG---VPIVGTSPDMIDAAEDRERFQKLLKELNLRQPPNRTARTEEEAMELAREIG 703

Query: 807  YPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALAD 866
            YP+VVRPSYVLGGRAMEIV+    L  Y+  AV+V  + PVL+D++L+DAIE+DVD ++D
Sbjct: 704  YPIVVRPSYVLGGRAMEIVHDQTGLERYMREAVKVSNDSPVLLDRFLNDAIEVDVDCISD 763

Query: 867  SCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNC 926
                V+IGG+MEHIEQAGVHSGDSAC +P  ++S   ++ +   T  +AK LNV GLMN 
Sbjct: 764  G-KRVLIGGVMEHIEQAGVHSGDSACSLPPYSLSKETIEELKRQTTLMAKGLNVVGLMNV 822

Query: 927  QYAIT---TSGD----VYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFT 979
            Q+AI      G     V++LE NPRASRTVPFVSKA G  LAK AA  M GKSL++ G  
Sbjct: 823  QFAIQHQEVDGKLQDVVFVLEVNPRASRTVPFVSKATGKQLAKIAARCMVGKSLDEQGIG 882

Query: 980  KEVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLP 1039
            +E +P + SVKEAV PF KF G D +LGPEM+STGEVMG+  +F  AF K+Q+AAG  LP
Sbjct: 883  RETVPPYFSVKEAVFPFVKFPGVDTILGPEMKSTGEVMGVGKTFGEAFVKSQMAAGVNLP 942

Query: 1040 LSGTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPH 1099
             SG VFLS+ D  KP   ++AKA + +GF I++T GTA+ +   GI VE V K+ EGRPH
Sbjct: 943  RSGKVFLSVKDSDKPRAVKVAKALVKLGFTIMATRGTANTIREAGIDVETVNKVAEGRPH 1002

Query: 1100 AGDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKS 1159
             GD++ N +I M++ T         D   +R   LA ++  ITT++GA A  + I  + +
Sbjct: 1003 IGDVIKNHEIVMVINTVEEKRTAIFDSRTIRTSALAARINTITTIAGAEAAVQGIACMDN 1062

Query: 1160 NTV 1162
              V
Sbjct: 1063 INV 1065


>gi|399115862|emb|CCG18666.1| carbamoyl-phosphate synthase large chain [Taylorella equigenitalis
            14/56]
          Length = 1081

 Score = 1286 bits (3329), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 645/1079 (59%), Positives = 815/1079 (75%), Gaps = 29/1079 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTDL+ ILI+GAGPIVIGQACEFDYSG QACKALK EGY  IL+NSNPATIMTDP  AD
Sbjct: 3    KRTDLKNILIIGAGPIVIGQACEFDYSGAQACKALKAEGYRTILVNSNPATIMTDPETAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
              YI P+T + +E+V+E E+PDA+LPTMGGQTALN A+ LA+ G LEK+GVEL+GA   A
Sbjct: 63   VIYIEPITWKSLEKVIEIEKPDAILPTMGGQTALNCALELAKQGVLEKHGVELVGANAHA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECIS----IANEIGE--FPLIIRPAFTLG 261
            I+KAEDR  FK+AM +IG+++  SGI +++DE       IA EIG   FP++IRP+FTLG
Sbjct: 123  IEKAEDRMKFKEAMSSIGLESAKSGIAHSMDEAWDVQRRIAEEIGTAGFPVVIRPSFTLG 182

Query: 262  GTGGGIAYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIE 321
            GTGGGIAYN EEFEAIC  GL AS T+++L+E+SLLGWKE+E+EV+RD ADN +IICSIE
Sbjct: 183  GTGGGIAYNPEEFEAICMRGLEASPTNELLIEESLLGWKEFEMEVVRDKADNCIIICSIE 242

Query: 322  NVDPMGVHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEV 381
            N+DPMGVHTGDSITVAPAQTLTDKEYQ +R+ SIA++REIGV+ GGSNVQFAVNP +G +
Sbjct: 243  NLDPMGVHTGDSITVAPAQTLTDKEYQIMRNASIAVLREIGVDTGGSNVQFAVNPANGRM 302

Query: 382  MVIEMNPRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITK-KTPASFEPSIDYV 440
            +VIEMNPRVSRSSALASKATGFPIAK+A++L+VGY+LD++ N+IT   TPASFEP++DYV
Sbjct: 303  IVIEMNPRVSRSSALASKATGFPIAKVASRLAVGYTLDELLNEITGGATPASFEPTLDYV 362

Query: 441  VTKIPRFAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVK 500
            VTKIPRFAFEKFP ++  LTTQMKSVGE MA+GRTF+ESFQKALR LE G  G     V 
Sbjct: 363  VTKIPRFAFEKFPQADSRLTTQMKSVGEVMAIGRTFKESFQKALRGLEVGVDGLNLKTV- 421

Query: 501  ELDWDWEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQF 560
                D E+L+  L  P P+R+  +  A  +G  +D++H L+ ID WFL Q KE++D+E  
Sbjct: 422  ----DLEKLQVELAEPGPERIWFVADAFDRGFSIDDVHRLTKIDLWFLEQIKEIVDIELA 477

Query: 561  LLTQSVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAE 620
            L  +++  +  +    +KR GFSD+++A+   ++E E+R+ R+  GV P YKRVDTCAAE
Sbjct: 478  LEQKTLGEIDAEVMRLLKREGFSDRRLAYLLDTSETEIRKIRIQQGVRPVYKRVDTCAAE 537

Query: 621  FEANTPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYET 680
            F+  T YMYS+Y+ E E+ PTQK+K+++LGGGPNRIGQGIEFDYCC H + SL+  GYET
Sbjct: 538  FDTKTAYMYSTYEEESEALPTQKQKIMVLGGGPNRIGQGIEFDYCCVHAALSLKQDGYET 597

Query: 681  IMMNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQ 740
            IM+N NPETVSTDYDT+DRLYFEPLT+EDVL ++D+E+P G+IVQ+GGQTPLKL+    +
Sbjct: 598  IMVNCNPETVSTDYDTADRLYFEPLTLEDVLEIVDIEKPVGVIVQYGGQTPLKLA----R 653

Query: 741  YLDEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALA 800
             L+ + +P         I GTSP+SID AEDRERF  ++++L+++QP    A++E +AL 
Sbjct: 654  DLELNGVP---------ILGTSPESIDIAEDRERFQKLLQKLNLKQPPNRTARTEEEALT 704

Query: 801  IAKEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEID 860
            +AKEIGYP+VVRPSYVLGGRAMEIV+    L  Y+  AV+V  + PVL+D+YL+DAIE+D
Sbjct: 705  LAKEIGYPLVVRPSYVLGGRAMEIVHDQMDLERYMTAAVKVSNDSPVLLDRYLNDAIEVD 764

Query: 861  VDALADSCGN-VVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLN 919
            VD + D  GN V I G+MEHIEQAGVHSGDSAC IP  ++S   +D I   T  +AK LN
Sbjct: 765  VDCICD--GNEVFIAGVMEHIEQAGVHSGDSACSIPPHSLSKEIVDEIKRQTRLMAKALN 822

Query: 920  VCGLMNCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFT 979
            V GLMN Q+AI  S +VY+LE NPRASRTVPFVSKA G P+AK AA VM+GKSL +LG T
Sbjct: 823  VRGLMNVQFAI-QSNEVYVLEVNPRASRTVPFVSKATGLPVAKIAARVMAGKSLEELGVT 881

Query: 980  KEVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLP 1039
            +E IP    VKEAV PF KF G D +LGPEM+STGEVMG+  +F  AF K+QIAAG  LP
Sbjct: 882  EEKIPNFYCVKEAVFPFAKFPGVDTILGPEMKSTGEVMGVGETFGEAFVKSQIAAGIDLP 941

Query: 1040 LSGTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPH 1099
             +G VFLS+ D  KP L  IAK  L++GFKI +T GTA  +   GI V+ V K+ EGRPH
Sbjct: 942  QAGLVFLSVKDSDKPKLIPIAKGLLELGFKICATRGTASAIYEAGIPVQVVNKVTEGRPH 1001

Query: 1100 AGDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLK 1158
              DM+ NG++ +++ T         D   +R   L  +V   TT++ A A  E ++ L+
Sbjct: 1002 IVDMLKNGELNLVINTVEEKRNAINDSRSIRTNALGARVTAYTTIAEASAAVEGLKYLR 1060


>gi|146283641|ref|YP_001173794.1| carbamoyl phosphate synthase large subunit [Pseudomonas stutzeri
            A1501]
 gi|145571846|gb|ABP80952.1| carbamoylphosphate synthetase large subunit [Pseudomonas stutzeri
            A1501]
          Length = 1073

 Score = 1286 bits (3328), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 635/1085 (58%), Positives = 815/1085 (75%), Gaps = 22/1085 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILILGAGPIVIGQACEFDYSG QACKALKEEG+ VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIKSILILGAGPIVIGQACEFDYSGAQACKALKEEGFRVILVNSNPATIMTDPAMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+    V +++EKERPDALLPTMGGQTALN A+ L + G LEK+GVE+IGA  D 
Sbjct: 63   ATYIEPIKWATVAKIIEKERPDALLPTMGGQTALNCALDLEKHGVLEKFGVEMIGANADT 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  F +AMK IG+  P SGI + ++E  ++ +++G FP IIRP+FT+GGTGGGI
Sbjct: 123  IDKAEDRSRFDKAMKNIGLACPESGIAHNMEEAYAVLDKVG-FPCIIRPSFTMGGTGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEFE IC  GL  S TS++L+++SL+GWKEYE+EV+RD  DN +I+CSIEN DPMG
Sbjct: 182  AYNREEFEEICARGLDLSPTSELLIDESLIGWKEYEMEVVRDKKDNCIIVCSIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGVE GGSNVQF + P  G ++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQIMRNASLAVLREIGVETGGSNVQFGICPNTGRMVVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT  +TPASFEP+IDYVVTK+PR
Sbjct: 302  PRVSRSSALASKATGFPIAKIAAKLAVGYTLDELSNDITGGRTPASFEPAIDYVVTKVPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            FAFEKFP ++  LTTQMKSVGE MA+GRTFQES QKALR LE G +G+    +   D + 
Sbjct: 362  FAFEKFPKADARLTTQMKSVGEVMAIGRTFQESMQKALRGLEVGATGFD-PKLNLADAEA 420

Query: 507  EQ-LKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQS 565
            E  LK  L VP  DR+  +  A + G  V+++  L+ ID WFL Q ++L+  E+ + T  
Sbjct: 421  ESTLKRELTVPGADRIWFVADAFRAGKSVEDVFALTNIDPWFLVQIEDLVKDEEQVKTLG 480

Query: 566  VSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANT 625
            +S++ +D  Y++KR+GFSD ++A     TEK +R  R  L V+P YKRVDTCAAEF  +T
Sbjct: 481  LSSIDRDLMYKLKRKGFSDARLAKLLGVTEKNLRSHRHKLKVLPVYKRVDTCAAEFATDT 540

Query: 626  PYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNS 685
             YMYS+Y+ ECE+ P+ ++K++ILGGGPNRIGQGIEFDYCC H + +++  GYETIM+N 
Sbjct: 541  AYMYSTYEEECEANPSGREKIMILGGGPNRIGQGIEFDYCCVHAALAMREDGYETIMVNC 600

Query: 686  NPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEH 745
            NPETVSTDYDTSDRLYFEP+T+EDVL ++ +E+P+G+IVQ+GGQTPLK    I + L+E 
Sbjct: 601  NPETVSTDYDTSDRLYFEPVTLEDVLEIVRVEQPKGVIVQYGGQTPLK----ICRALEEA 656

Query: 746  RLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEI 805
             +P         I GTSPD+ID AEDRERF  +++ L++ QP+   A+SE +A+A +K I
Sbjct: 657  GVP---------IIGTSPDAIDRAEDRERFQQMVQRLNLRQPQNATARSEEEAIAASKAI 707

Query: 806  GYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALA 865
            GYP+VVRPSYVLGGRAMEIVY +E L  Y+  AV+V  + PVL+D +L+ AIE+DVDA+ 
Sbjct: 708  GYPLVVRPSYVLGGRAMEIVYEEEELKRYMREAVQVSNDSPVLLDHFLNCAIEVDVDAVC 767

Query: 866  DSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMN 925
            D    VVIGGIM+HIEQAGVHSGDSAC +P  ++     D I     K+A  L+V GLMN
Sbjct: 768  DG-ETVVIGGIMQHIEQAGVHSGDSACSLPAYSLPQHIQDEIREQVRKMALELDVVGLMN 826

Query: 926  CQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPK 985
             Q A+    D+Y+LE NPRASRTVPFVSK IG  LAK AA VM+GKSL ++GFT+E+IP 
Sbjct: 827  VQMAVQGE-DIYVLEVNPRASRTVPFVSKCIGESLAKVAARVMAGKSLAEVGFTREIIPT 885

Query: 986  HVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVF 1045
            + SVKEAV PF KF G D +LGPEM+STGEVMG+  SF  AFAKAQ+ A + LP SG  F
Sbjct: 886  YFSVKEAVFPFAKFPGVDTILGPEMKSTGEVMGVGDSFAEAFAKAQLGASEILPTSGCAF 945

Query: 1046 LSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVA 1105
            LS+ +  KP++E++A+  + +GF++V+T+GTA  +E  G+ V RV K+ EGRPH  DM+ 
Sbjct: 946  LSVREDDKPYVEQVARDLVGLGFEVVATAGTARIIEAAGLPVRRVNKVTEGRPHVVDMIK 1005

Query: 1106 NGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTVTMT 1165
            N ++ +++ T+ G      D   +RR  L +K+ + TT++G  A  EA++     TV   
Sbjct: 1006 NDEVTLIINTTEGRQ-SIADSYSIRRNALQHKICITTTIAGGQAICEALKFGPEKTVRR- 1063

Query: 1166 ALQDF 1170
             LQD 
Sbjct: 1064 -LQDL 1067


>gi|256823599|ref|YP_003147562.1| carbamoyl-phosphate synthase large subunit [Kangiella koreensis DSM
            16069]
 gi|256797138|gb|ACV27794.1| carbamoyl-phosphate synthase, large subunit [Kangiella koreensis DSM
            16069]
          Length = 1074

 Score = 1286 bits (3327), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 633/1070 (59%), Positives = 810/1070 (75%), Gaps = 20/1070 (1%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILILGAGPI+IGQACEFDYSG QACKAL+EEG+ VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIKSILILGAGPIIIGQACEFDYSGAQACKALREEGFRVILVNSNPATIMTDPNMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  E+V +++EKE+PDA+LPTMGGQTALN A+ LA  G LE +GVE+IGA  +A
Sbjct: 63   VTYIEPIHWEVVAKIIEKEKPDAILPTMGGQTALNCALDLASRGVLEIHGVEMIGATREA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR+LF +AM  IG+  P   + ++L++   +  E+G FP IIRP+FT+GGTGGGI
Sbjct: 123  IDKAEDRELFAKAMSKIGLDQPRQQVAHSLEDAWKVQKEVG-FPCIIRPSFTMGGTGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYNKEEFE IC  GL  S T+++L+++SL+GWKEYE+EV+RD  DN +IICSIEN DPMG
Sbjct: 182  AYNKEEFEEICLRGLDLSPTNELLIDESLIGWKEYEMEVVRDKNDNCIIICSIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQR+R+ S+A++REIGVE GGSNVQFA+NP +G + +IEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQRMRNASLAVLREIGVETGGSNVQFAINPENGRMTIIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITK-KTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ N+IT  KTPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGYTLDELQNEITGGKTPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            F FEKFP  +  LTTQMKSVGE MA+GR FQESFQKA+R LE G SG+    + E D  W
Sbjct: 362  FNFEKFPNVDKTLTTQMKSVGEVMAIGRNFQESFQKAIRGLEVGSSGFE-PKLAEDDESW 420

Query: 507  -EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQS 565
             + L+ +LRVP  DR+  I  A +KG  +DE+ EL+ IDKWFL Q +ELI +E+ L  +S
Sbjct: 421  VDTLRQNLRVPGSDRIWYIGDAFRKGWSLDEVFELTGIDKWFLIQIQELIQIEESLKDKS 480

Query: 566  VSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANT 625
             S++  D    +KR+GF+D+++A     +EKE+R+ R  LGVIP +KRVDTCAAEF  +T
Sbjct: 481  FSDLDADLMRHIKRKGFADQRLADIFAISEKEIRKLRKELGVIPVFKRVDTCAAEFATST 540

Query: 626  PYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNS 685
             YMYS+Y+ ECE+ PT + K++ILGGGPNRIGQGIEFDYCC H +F+++  GYETIM+N 
Sbjct: 541  AYMYSTYEEECEANPTDRDKIMILGGGPNRIGQGIEFDYCCVHAAFAMRDDGYETIMVNC 600

Query: 686  NPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEH 745
            NPETVSTDYDTSDRLYFEPLT+EDVL ++D+E+P+G+IV +GGQTPLKL+          
Sbjct: 601  NPETVSTDYDTSDRLYFEPLTLEDVLAIVDIEKPKGVIVHYGGQTPLKLA---------- 650

Query: 746  RLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEI 805
            R   A+G   V I GTSPD+ID AEDRERF   I  L + QP    A++  + + +A+EI
Sbjct: 651  RDLEAAG---VPIIGTSPDAIDRAEDRERFQRAINRLGLLQPPNRTARNMEEGVRLAEEI 707

Query: 806  GYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALA 865
            GYP+VVRPSYVLGGRAMEIVY +E L  Y+ +AV V  E PVL+D++L DAIE+DVDA+ 
Sbjct: 708  GYPLVVRPSYVLGGRAMEIVYNEEELRRYMNDAVSVSNESPVLLDRFLDDAIEVDVDAIF 767

Query: 866  DSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMN 925
            D   N++IGGIMEHIEQAGVHSGDSAC IP  ++S    D +    + +AK L V GLMN
Sbjct: 768  DG-KNILIGGIMEHIEQAGVHSGDSACSIPPFSLSKEVQDELRRQMLVMAKELKVRGLMN 826

Query: 926  CQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPK 985
             Q+AI     +++LE NPRASRTVPFVSKA G P+AK AA VM+GK+L + GFTKE+IP+
Sbjct: 827  AQFAIQGE-RIFILEVNPRASRTVPFVSKATGTPMAKVAASVMAGKTLAETGFTKEIIPR 885

Query: 986  HVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVF 1045
            + SVKE V PF KF G D +LGPEM+STGE MG+  +F  AF KA++  GQ +P SG V 
Sbjct: 886  YFSVKEPVFPFNKFPGSDPILGPEMKSTGEAMGVGKTFGDAFYKAKLGGGQAVPDSGQVI 945

Query: 1046 LSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVA 1105
            +S+ +  +  L  +A++  + GF++++T GTA  +   GI  +R+ KM EGRPH  D + 
Sbjct: 946  ISVREADRNGLPAVARSLAEQGFELLATGGTARAIREAGIPCQRINKMFEGRPHIVDYIK 1005

Query: 1106 NGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIR 1155
            NG++  ++ T+ G      D   +RR  L +KVP  TT++GA+A+  A++
Sbjct: 1006 NGEVDYIINTTEGKQA-IADSFLIRRSALQHKVPYTTTLAGAVASCAAMK 1054


>gi|339495445|ref|YP_004715738.1| carbamoyl phosphate synthase large subunit [Pseudomonas stutzeri ATCC
            17588 = LMG 11199]
 gi|338802817|gb|AEJ06649.1| carbamoyl phosphate synthase large subunit [Pseudomonas stutzeri ATCC
            17588 = LMG 11199]
          Length = 1073

 Score = 1286 bits (3327), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 635/1085 (58%), Positives = 815/1085 (75%), Gaps = 22/1085 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILILGAGPIVIGQACEFDYSG QACKALKEEG+ VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIKSILILGAGPIVIGQACEFDYSGAQACKALKEEGFRVILVNSNPATIMTDPAMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+    V +++EKERPDALLPTMGGQTALN A+ L + G LEK+GVE+IGA  D 
Sbjct: 63   ATYIEPIKWATVAKIIEKERPDALLPTMGGQTALNCALDLEKHGVLEKFGVEMIGANADT 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  F +AMK IG+  P SGI + ++E  ++ +++G FP IIRP+FT+GGTGGGI
Sbjct: 123  IDKAEDRSRFDKAMKNIGLACPESGIAHNMEEAYAVLDKVG-FPCIIRPSFTMGGTGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEFE IC  GL  S TS++L+++SL+GWKEYE+EV+RD  DN +I+CSIEN DPMG
Sbjct: 182  AYNREEFEEICARGLDLSPTSELLIDESLIGWKEYEMEVVRDKKDNCIIVCSIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGVE GGSNVQF + P  G ++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQIMRNASLAVLREIGVETGGSNVQFGICPNTGRMVVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT  +TPASFEP+IDYVVTK+PR
Sbjct: 302  PRVSRSSALASKATGFPIAKIAAKLAVGYTLDELSNDITGGRTPASFEPAIDYVVTKVPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            FAFEKFP ++  LTTQMKSVGE MA+GRTFQES QKALR LE G +G+    +   D + 
Sbjct: 362  FAFEKFPKADARLTTQMKSVGEVMAIGRTFQESMQKALRGLEVGATGFD-PKLNLADAEA 420

Query: 507  EQ-LKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQS 565
            E  LK  L VP  DR+  +  A + G  V+++  L+ ID WFL Q ++L+  E+ + T  
Sbjct: 421  ESTLKRELTVPGADRIWFVADAFRAGKSVEDVFALTNIDPWFLVQIEDLVKDEEQVKTLG 480

Query: 566  VSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANT 625
            +S++ +D  Y++KR+GFSD ++A     TEK +R  R  L V+P YKRVDTCAAEF  +T
Sbjct: 481  LSSIDRDLMYKLKRKGFSDARLAKLLGVTEKNLRSHRHKLKVLPVYKRVDTCAAEFATDT 540

Query: 626  PYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNS 685
             YMYS+Y+ ECE+ P+ ++K++ILGGGPNRIGQGIEFDYCC H + +++  GYETIM+N 
Sbjct: 541  AYMYSTYEEECEAYPSGREKIMILGGGPNRIGQGIEFDYCCVHAALAMREDGYETIMVNC 600

Query: 686  NPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEH 745
            NPETVSTDYDTSDRLYFEP+T+EDVL ++ +E+P+G+IVQ+GGQTPLK    I + L+E 
Sbjct: 601  NPETVSTDYDTSDRLYFEPVTLEDVLEIVRVEQPKGVIVQYGGQTPLK----ICRALEEA 656

Query: 746  RLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEI 805
             +P         I GTSPD+ID AEDRERF  +++ L++ QP+   A+SE +A+A +K I
Sbjct: 657  GVP---------IIGTSPDAIDRAEDRERFQQMVQRLNLRQPQNATARSEEEAIAASKAI 707

Query: 806  GYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALA 865
            GYP+VVRPSYVLGGRAMEIVY +E L  Y+  AV+V  + PVL+D +L+ AIE+DVDA+ 
Sbjct: 708  GYPLVVRPSYVLGGRAMEIVYEEEELKRYMREAVQVSNDSPVLLDHFLNCAIEVDVDAVC 767

Query: 866  DSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMN 925
            D    VVIGGIM+HIEQAGVHSGDSAC +P  ++     D I     K+A  L+V GLMN
Sbjct: 768  DG-ETVVIGGIMQHIEQAGVHSGDSACSLPAYSLPQHIQDEIREQVRKMALELDVVGLMN 826

Query: 926  CQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPK 985
             Q A+    D+Y+LE NPRASRTVPFVSK IG  LAK AA VM+GKSL ++GFT+E+IP 
Sbjct: 827  VQMAVQGE-DIYVLEVNPRASRTVPFVSKCIGESLAKVAARVMAGKSLAEVGFTREIIPT 885

Query: 986  HVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVF 1045
            + SVKEAV PF KF G D +LGPEM+STGEVMG+  SF  AFAKAQ+ A + LP SG  F
Sbjct: 886  YFSVKEAVFPFAKFPGVDTILGPEMKSTGEVMGVGDSFAEAFAKAQLGASEILPTSGCAF 945

Query: 1046 LSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVA 1105
            LS+ +  KP++E++A+  + +GF++V+T+GTA  +E  G+ V RV K+ EGRPH  DM+ 
Sbjct: 946  LSVREDDKPYVEQVARDLVGLGFEVVATAGTARIIEAAGLPVRRVNKVTEGRPHVVDMIK 1005

Query: 1106 NGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTVTMT 1165
            N ++ +++ T+ G      D   +RR  L +K+ + TT++G  A  EA++     TV   
Sbjct: 1006 NDEVTLIINTTEGRQ-SIADSYSIRRNALQHKICITTTIAGGQAICEALKFGPEKTVRR- 1063

Query: 1166 ALQDF 1170
             LQD 
Sbjct: 1064 -LQDL 1067


>gi|389796670|ref|ZP_10199721.1| carbamoyl phosphate synthase large subunit [Rhodanobacter sp. 116-2]
 gi|388448195|gb|EIM04180.1| carbamoyl phosphate synthase large subunit [Rhodanobacter sp. 116-2]
          Length = 1075

 Score = 1285 bits (3326), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 640/1065 (60%), Positives = 802/1065 (75%), Gaps = 20/1065 (1%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILI+GAGPIVIGQACEFDYSG QACKALKEEG+ VIL+NSNPATIMTDP  AD
Sbjct: 3    KRTDIKSILIIGAGPIVIGQACEFDYSGAQACKALKEEGFRVILVNSNPATIMTDPETAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
              YI P+  + VE+++ KERPDA+LPTMGGQTALN A+ LA+ G LEKY VELIGA+ +A
Sbjct: 63   AVYIEPINWQTVERIIAKERPDAVLPTMGGQTALNCALDLADHGVLEKYQVELIGARREA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I+ AEDR+LFKQAM  IG+++P S +  + +  + I   +G FP+IIRP+FTLGGTGGGI
Sbjct: 123  IRMAEDRELFKQAMTEIGLESPKSDVAKSFEHAVEIQARLG-FPVIIRPSFTLGGTGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYNKEEFE I K GL  S T +VL+++S+LGWKE+E+EV+RD ADN +IIC+IEN+DPMG
Sbjct: 182  AYNKEEFELIVKRGLEMSPTHEVLIDESVLGWKEFEMEVVRDTADNCIIICAIENLDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQRLRD SIA++R+IGV+ GGSNVQF VNPVDG V+VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQRLRDASIAVLRKIGVDTGGSNVQFGVNPVDGRVVVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKK-TPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT   TPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGYTLDELKNDITGGLTPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVK-ELDWD 505
            FAFEKFP ++  LTTQMKSVGE MA+GR+F ES QKALR LE G +G   + +    D  
Sbjct: 362  FAFEKFPAADARLTTQMKSVGEVMAIGRSFHESLQKALRGLEIGKTGLNPTGLDLGTDDG 421

Query: 506  WEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQS 565
               LK  LR P PDR+  +  A + G+ ++E+  LS +D WFL  F++++  E  +  Q 
Sbjct: 422  LAVLKRELREPRPDRVFHLADAFRAGLSLEEVFNLSRVDPWFLAAFEDIVLTEAEITRQG 481

Query: 566  VSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANT 625
            ++ +      E+KR GF+D +IA    + E  VR  R +LGV P YKRVD+CAAEF  +T
Sbjct: 482  ITALDAPRLRELKRLGFADARIAELIGTDEAAVRHLRHTLGVRPVYKRVDSCAAEFATST 541

Query: 626  PYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNS 685
             YMYS+Y+ ECE+APT + K+++LGGGPNRIGQGIEFDYCC H S +L+  GYETIM+N 
Sbjct: 542  AYMYSTYEEECEAAPTGRDKIIVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVNC 601

Query: 686  NPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEH 745
            NPETVSTDYDTSDRLYFEPLT+EDVL ++ +E+P+G+IVQ+GGQTPLKL+          
Sbjct: 602  NPETVSTDYDTSDRLYFEPLTLEDVLEIVHVEKPKGVIVQYGGQTPLKLA---------- 651

Query: 746  RLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEI 805
            R   A+G   V I GTSPDSID AEDRERF  +I+++ ++QP    A++  +ALA+A+EI
Sbjct: 652  RALEAAG---VPIIGTSPDSIDLAEDRERFQHMIEKIGLKQPPNRTARNADEALALAREI 708

Query: 806  GYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALA 865
            GYP+VVRPSYVLGGRAME+V+ D  L  Y+ +AV+V  + PVL+D++L  A+E+DVD +A
Sbjct: 709  GYPLVVRPSYVLGGRAMEVVHDDADLSRYIRDAVKVSNDSPVLLDRFLDHAVEVDVDVIA 768

Query: 866  DSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMN 925
            D+ G V+IGGIMEHIE+AGVHSGDS+C +P  ++S+S  D +      +AK L V GLMN
Sbjct: 769  DAEGTVLIGGIMEHIEEAGVHSGDSSCSLPPYSLSTSIQDEMRRQVSAMAKELKVIGLMN 828

Query: 926  CQYAITTSGD-VYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIP 984
             Q+AI   GD VY+LE NPRASRTVPFVSKA G PLAK AA VM+G+SL  LG T+EVIP
Sbjct: 829  TQFAI--QGDTVYILEVNPRASRTVPFVSKATGVPLAKIAARVMAGRSLISLGATREVIP 886

Query: 985  KHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTV 1044
             + SVKEA+ PF KFQ  D +LGPEMRSTGEVMG+  SF  AFA+   AAG K P  G  
Sbjct: 887  AYYSVKEAIFPFLKFQNVDPILGPEMRSTGEVMGVGRSFGAAFARGHEAAGIKAPTVGKA 946

Query: 1045 FLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMV 1104
            FLS+ D  K  L  +A+  +  GF +V+T+GTA +L   G+A ER+ K+ EGRPH  D++
Sbjct: 947  FLSVRDGDKDRLLPVAREIIARGFNLVATAGTASYLTGHGVACERINKVLEGRPHIVDLI 1006

Query: 1105 ANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALA 1149
             NG+I  +V T+ G      D   +RR  L ++V   TTV+GA A
Sbjct: 1007 KNGEIVYIVNTTEGKQAIA-DSFSIRREALQHRVTYSTTVAGARA 1050


>gi|352082139|ref|ZP_08952962.1| carbamoyl-phosphate synthase, large subunit [Rhodanobacter sp.
            2APBS1]
 gi|351682277|gb|EHA65383.1| carbamoyl-phosphate synthase, large subunit [Rhodanobacter sp.
            2APBS1]
          Length = 1075

 Score = 1285 bits (3325), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 639/1065 (60%), Positives = 802/1065 (75%), Gaps = 20/1065 (1%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILI+GAGPIVIGQACEFDYSG QACKALKEEG+ VIL+NSNPATIMTDP  AD
Sbjct: 3    KRTDIKSILIIGAGPIVIGQACEFDYSGAQACKALKEEGFRVILVNSNPATIMTDPETAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
              YI P+  + VE+++ KERPDA+LPTMGGQTALN A+ LA+ G LEKY VELIGA+ +A
Sbjct: 63   AVYIEPINWQTVERIIAKERPDAVLPTMGGQTALNCALDLADHGVLEKYQVELIGARREA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I+ AEDR+LFKQAM  IG+++P S +  + +  + I   +G FP+IIRP+FTLGGTGGGI
Sbjct: 123  IRMAEDRELFKQAMTEIGLESPKSDVAKSFEHAVEIQARLG-FPVIIRPSFTLGGTGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYNKEEFE I K GL  S T +VL+++S+LGWKE+E+EV+RD ADN +IIC+IEN+DPMG
Sbjct: 182  AYNKEEFELIVKRGLEMSPTHEVLIDESVLGWKEFEMEVVRDTADNCIIICAIENLDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQRLRD SIA++R+IGV+ GGSNVQF VNPVDG V+VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQRLRDASIAVLRKIGVDTGGSNVQFGVNPVDGRVVVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKK-TPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT   TPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGYTLDELKNDITGGLTPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVK-ELDWD 505
            FAFEKFP ++  LTTQMKSVGE MA+GR+F ES QKALR LE G +G   + +    D  
Sbjct: 362  FAFEKFPAADARLTTQMKSVGEVMAIGRSFHESLQKALRGLEIGKTGLNPTGLDLGTDDG 421

Query: 506  WEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQS 565
               LK  LR P PDR+  +  A + G+ ++E+  LS +D WFL  F++++  E  +  Q 
Sbjct: 422  LAVLKRELREPRPDRVFHLADAFRAGLSLEEVFNLSRVDPWFLAAFEDIVLTEAEITRQG 481

Query: 566  VSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANT 625
            ++ +      E+KR GF+D +IA    + E  VR  R +LGV P YKRVD+CAAEF  +T
Sbjct: 482  ITALDASRLRELKRLGFADARIAELIGTDEAAVRHLRHTLGVRPVYKRVDSCAAEFATST 541

Query: 626  PYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNS 685
             YMYS+Y+ ECE+APT + K+++LGGGPNRIGQGIEFDYCC H S +L+  GYETIM+N 
Sbjct: 542  AYMYSTYEEECEAAPTGRDKIIVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVNC 601

Query: 686  NPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEH 745
            NPETVSTDYDTSDRLYFEPLT+EDVL ++ +E+P+G+IVQ+GGQTPLKL+          
Sbjct: 602  NPETVSTDYDTSDRLYFEPLTLEDVLEIVHVEKPKGVIVQYGGQTPLKLA---------- 651

Query: 746  RLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEI 805
            R   A+G   V I GTSPDSID AEDRERF  +I+++ ++QP    A++  +ALA+A+EI
Sbjct: 652  RALEAAG---VPIIGTSPDSIDLAEDRERFQHMIEKIGLKQPPNRTARNADEALALAREI 708

Query: 806  GYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALA 865
            GYP+VVRPSYVLGGRAME+V+ D  L  Y+ +AV+V  + PVL+D++L  A+E+DVD +A
Sbjct: 709  GYPLVVRPSYVLGGRAMEVVHDDADLSRYIRDAVKVSNDSPVLLDRFLDHAVEVDVDVIA 768

Query: 866  DSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMN 925
            D+ G V+IGGIMEHIE+AGVHSGDS+C +P  ++S+S  + +      +AK L V GLMN
Sbjct: 769  DAEGTVLIGGIMEHIEEAGVHSGDSSCSLPPYSLSASIQNEMRRQVSAMAKELKVIGLMN 828

Query: 926  CQYAITTSGD-VYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIP 984
             Q+AI   GD VY+LE NPRASRTVPFVSKA G PLAK AA VM+G+SL  LG T+EVIP
Sbjct: 829  TQFAI--QGDTVYILEVNPRASRTVPFVSKATGVPLAKIAARVMAGRSLISLGATREVIP 886

Query: 985  KHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTV 1044
             + SVKEA+ PF KFQ  D +LGPEMRSTGEVMG+  SF  AFA+   AAG K P  G  
Sbjct: 887  AYYSVKEAIFPFLKFQNVDPILGPEMRSTGEVMGVGRSFGAAFARGHEAAGIKAPTVGKA 946

Query: 1045 FLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMV 1104
            FLS+ D  K  L  +A+  +  GF +V+T+GTA +L   G+A ER+ K+ EGRPH  D++
Sbjct: 947  FLSVRDGDKDRLLPVAREIIARGFNLVATAGTASYLTGHGVACERINKVLEGRPHIVDLI 1006

Query: 1105 ANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALA 1149
             NG+I  +V T+ G      D   +RR  L ++V   TTV+GA A
Sbjct: 1007 KNGEIVYIVNTTEGKQAIA-DSFSIRREALQHRVTYSTTVAGARA 1050


>gi|71906578|ref|YP_284165.1| carbamoyl phosphate synthase large subunit [Dechloromonas aromatica
            RCB]
 gi|71846199|gb|AAZ45695.1| carbamoyl-phosphate synthase large subunit [Dechloromonas aromatica
            RCB]
          Length = 1068

 Score = 1285 bits (3325), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 649/1071 (60%), Positives = 810/1071 (75%), Gaps = 22/1071 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ +LI+GAGPI+IGQACEFDYSG QACKAL+EEGY+VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIKSVLIIGAGPIIIGQACEFDYSGAQACKALREEGYKVILVNSNPATIMTDPEMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+T ++V +++EKERPDALLPTMGGQTALN A+ L   G L K+ VELIGA  +A
Sbjct: 63   VTYIEPITWQVVAKIIEKERPDALLPTMGGQTALNCALDLDREGVLAKFNVELIGASKEA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  FK AM  IG+ +  S   ++++E   +   IG FP IIRP+FTLGGTGGGI
Sbjct: 123  IDKAEDRQKFKDAMTKIGLGSAKSATAHSMEEAYQVQAVIG-FPTIIRPSFTLGGTGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN EEFE ICK GL AS T+++L+E+SLLGWKEYE+EV+RD ADN +IICSIEN+DPMG
Sbjct: 182  AYNMEEFEIICKRGLEASPTNELLIEESLLGWKEYEMEVVRDKADNCIIICSIENLDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ LR+ SIA++REIGV+ GGSNVQF++NP DG ++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQILRNASIAVLREIGVDTGGSNVQFSINPKDGRMIVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKLSVGY+LD++ NDIT  KTPASFEPSIDYVVTK+PR
Sbjct: 302  PRVSRSSALASKATGFPIAKIAAKLSVGYTLDELSNDITGGKTPASFEPSIDYVVTKVPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            FAFEKFP ++  LTTQMKSVGE MA+GRTFQES QKALR LE G  G+    V     D 
Sbjct: 362  FAFEKFPQADSTLTTQMKSVGEVMAIGRTFQESLQKALRGLEVGVDGFNLKTV-----DP 416

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
            E +   L  P PDR+  +  A   GM V+++ +L+ ID WFL Q KE++D+E  +  +  
Sbjct: 417  ETIDEQLARPTPDRLWYVADAFGIGMSVEKVFDLTKIDPWFLVQIKEIVDLELAVEKREF 476

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
            S++T ++   +KR+GF+D+++A  TK++E  VRE+R  L V P YKRVDTCAAEF   T 
Sbjct: 477  SSLTAEELRYLKRKGFADRRLAHLTKTSETAVRERRHELKVRPVYKRVDTCAAEFSTGTA 536

Query: 627  YMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSN 686
            YMYS+Y+ ECE+ PT KKK+++LGGGPNRIGQGIEFDYCC H + +++  GYETIM+N N
Sbjct: 537  YMYSTYEDECEAMPTDKKKIMVLGGGPNRIGQGIEFDYCCVHAAMAMREDGYETIMVNCN 596

Query: 687  PETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHR 746
            PETVSTDYDTSDRLYFEPLT+EDVL +  +E+P G+IVQ+GGQTPLKL+L +        
Sbjct: 597  PETVSTDYDTSDRLYFEPLTLEDVLEICAIEKPVGVIVQYGGQTPLKLALALE------- 649

Query: 747  LPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEIG 806
               A+G   V I GT+P+SID AEDRERF  ++ +L ++QP    A++E DAL +A+EIG
Sbjct: 650  ---ANG---VPIIGTTPESIDIAEDRERFQKLLHDLGLKQPPNRTARTEEDALRLAQEIG 703

Query: 807  YPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALAD 866
            YP+VVRPSYVLGGRAMEIV+  + L  Y+  AV+V  + PVL+D++L+DA+E DVDAL+D
Sbjct: 704  YPLVVRPSYVLGGRAMEIVHEQKDLERYMREAVKVSNDSPVLLDRFLNDAVECDVDALSD 763

Query: 867  SCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNC 926
                V+IGG+MEHIEQAGVHSGDSAC +P  ++S++  D +   T  +AK LNVCGLMN 
Sbjct: 764  G-EEVIIGGVMEHIEQAGVHSGDSACSLPPYSLSAAVQDELRRQTKLMAKALNVCGLMNV 822

Query: 927  QYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPKH 986
            Q+AI  + DVY+LE NPRASRTVPFVSKA G  LAK AA  M+G+SL D G TKE+IP +
Sbjct: 823  QFAIKDN-DVYVLEVNPRASRTVPFVSKATGLQLAKIAARCMAGRSLKDQGITKEIIPPY 881

Query: 987  VSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVFL 1046
             SVKEAV PF KF G D +LGPEM+STGEVMG+ ++F  AF K+Q+AAG KLP SG VFL
Sbjct: 882  YSVKEAVFPFVKFPGVDTILGPEMKSTGEVMGVGVTFAEAFVKSQLAAGVKLPKSGKVFL 941

Query: 1047 SLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVAN 1106
            S+ D  K     IA+   D GF + +T GTAH +E  G+ V+ V K+ EGRPH  DM+ N
Sbjct: 942  SVKDSDKAKAIEIARHLHDAGFHLAATRGTAHAIEAAGLPVQSVNKVTEGRPHIVDMIKN 1001

Query: 1107 GQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSL 1157
             +I +++ T         D   +R  GL  +V + TT+ GA A AE IR L
Sbjct: 1002 NEIALIINTVEEKRGAINDSRSIRTSGLQARVTMYTTIWGAEAAAEGIRHL 1052


>gi|389808146|ref|ZP_10204556.1| carbamoyl phosphate synthase large subunit [Rhodanobacter thiooxydans
            LCS2]
 gi|388443024|gb|EIL99183.1| carbamoyl phosphate synthase large subunit [Rhodanobacter thiooxydans
            LCS2]
          Length = 1075

 Score = 1285 bits (3324), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 638/1065 (59%), Positives = 798/1065 (74%), Gaps = 20/1065 (1%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ +LI+GAGPIVIGQACEFDYSG QACKALKEEG+ VIL+NSNPATIMTDP  AD
Sbjct: 3    KRTDIKSVLIIGAGPIVIGQACEFDYSGAQACKALKEEGFRVILVNSNPATIMTDPDTAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
              YI P+  + VE+++ KERPDA+LPTMGGQT LN A+ LA+ G LEKY VELIGA+ +A
Sbjct: 63   AVYIEPINWQTVERIIAKERPDAVLPTMGGQTGLNCALDLADHGVLEKYNVELIGARREA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I+ AEDR+LFK+AM  IG+++P S +    +  + I   +G FP+IIRP+FTLGGTGGGI
Sbjct: 123  IRMAEDRELFKRAMTEIGLESPKSDVARNFEHAVEIQARLG-FPVIIRPSFTLGGTGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYNKEEFEAI K GL  S T +VL+++S+LGWKEYE+EV+RD ADN +IIC+IEN+DPMG
Sbjct: 182  AYNKEEFEAIVKRGLEMSPTHEVLIDESVLGWKEYEMEVVRDTADNCIIICAIENLDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQRLRD SIA++R+IGV+ GGSNVQF VNPVDG V+VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQRLRDASIAVLRKIGVDTGGSNVQFGVNPVDGRVVVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT  +TPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGYTLDELKNDITGGRTPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVK-ELDWD 505
            FAFEKFP ++  LTTQMKSVGE MA+GR+F ES QKALR LE G +G   + +    D  
Sbjct: 362  FAFEKFPAADARLTTQMKSVGEVMAIGRSFHESLQKALRGLEIGKTGLNPTGLDLGTDDG 421

Query: 506  WEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQS 565
               LK  LR P PDR+  +  A + G  ++E+ ELS ID WFL  F++++  E  +  Q 
Sbjct: 422  LAVLKRELREPRPDRVFHLADAFRAGFSLEEVFELSRIDPWFLAAFEDIVQTEAEITRQG 481

Query: 566  VSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANT 625
            ++ +      E+KR GF+D +IA    S E  VR  R +LGV P YKRVD+CAAEF   T
Sbjct: 482  ITALDAPRLRELKRLGFADARIAELIGSDEAAVRHLRQTLGVRPVYKRVDSCAAEFATGT 541

Query: 626  PYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNS 685
             YMYS+Y+ ECE+ P+ + K+++LGGGPNRIGQGIEFDYCC H S +L+  GYETIM+N 
Sbjct: 542  AYMYSTYEEECEANPSTRDKIIVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVNC 601

Query: 686  NPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEH 745
            NPETVSTDYDTSDRLYFEP+T+EDVL ++ +E+P+G+IVQ+GGQTPLKL+          
Sbjct: 602  NPETVSTDYDTSDRLYFEPVTLEDVLEIVHVEKPKGVIVQYGGQTPLKLA---------- 651

Query: 746  RLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEI 805
            R   A+G   V I GTSPDSID AEDRERF  +I+++ ++QP    A++  +ALA+A+EI
Sbjct: 652  RALEAAG---VPIIGTSPDSIDLAEDRERFQHMIEKIGLKQPPNRTARNADEALALAREI 708

Query: 806  GYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALA 865
            GYP+VVRPSYVLGGRAME+V+ D  L  Y+ +AV+V  + PVL+D++L  A+E+DVD +A
Sbjct: 709  GYPLVVRPSYVLGGRAMEVVHDDADLSRYIRDAVKVSNDSPVLLDRFLDHAVEVDVDVIA 768

Query: 866  DSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMN 925
            D+ G V+IGGIMEHIE+AGVHSGDS+C +P  ++S+   D +      +AK L V GLMN
Sbjct: 769  DAEGTVLIGGIMEHIEEAGVHSGDSSCSLPPYSLSAEIQDEMRRQVSAMAKELKVIGLMN 828

Query: 926  CQYAITTSGD-VYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIP 984
             Q+AI   GD VY+LE NPRASRTVPFVSKA G PLAK AA VM+G+SL   G T+EVIP
Sbjct: 829  TQFAI--QGDTVYILEVNPRASRTVPFVSKATGVPLAKIAARVMAGRSLVAQGATREVIP 886

Query: 985  KHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTV 1044
             + SVKEA+ PF KFQ  D +LGPEMRSTGEVMG+  SF  AFA+   AAG K P  G  
Sbjct: 887  SYYSVKEAIFPFLKFQNVDPILGPEMRSTGEVMGVGRSFGAAFARGHEAAGIKAPTVGKA 946

Query: 1045 FLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMV 1104
            FLS+ D  K  L  +A+  +  GF +V+T+GTA +L   G+A ERV K+ EGRPH  D++
Sbjct: 947  FLSVRDADKERLLPVAREIIARGFNVVATAGTASYLTGHGVACERVNKVLEGRPHIVDLI 1006

Query: 1105 ANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALA 1149
             NG+I  +V T+ G      D   +RR  L ++V   TTV+GA A
Sbjct: 1007 KNGEIVYIVNTTEGKQA-IADSFSIRREALQHRVTYSTTVAGARA 1050


>gi|383455244|ref|YP_005369233.1| carbamoyl phosphate synthase large subunit [Corallococcus coralloides
            DSM 2259]
 gi|380732258|gb|AFE08260.1| carbamoyl phosphate synthase large subunit [Corallococcus coralloides
            DSM 2259]
          Length = 1083

 Score = 1284 bits (3323), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 631/1086 (58%), Positives = 807/1086 (74%), Gaps = 18/1086 (1%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD+RK+L++G+GPIVIGQA EFDYSGTQA KAL++EG EV+L+NSNPAT+MTDP  A 
Sbjct: 3    KRTDIRKVLVIGSGPIVIGQAVEFDYSGTQAIKALRDEGVEVVLLNSNPATVMTDPEFAH 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
            RTYI P+T E  E++L  ERPD+LLPTMGGQTALNLA ALAE G LEKYGV LIGA L+A
Sbjct: 63   RTYIEPITVEAAEKILAAERPDSLLPTMGGQTALNLAKALAERGILEKYGVRLIGASLEA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR LFK AM+ IGV  P SG   TL + +++  EIG FP IIRP+FTLGGTGGGI
Sbjct: 123  INKAEDRQLFKAAMQKIGVALPKSGYATTLTDAMALVEEIG-FPAIIRPSFTLGGTGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEFEAIC++GL AS TS +LVE+S+LGWKEYELEV+RD ADNV+IICSIEN+DPMG
Sbjct: 182  AYNREEFEAICRSGLKASPTSTILVEESVLGWKEYELEVVRDSADNVIIICSIENLDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTD+EYQR+R  S+AIIREIGV+ GGSN+QF ++P DG ++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDREYQRMRQASLAIIREIGVDTGGSNIQFGIHPRDGRMVVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRF 447
            PRVSRSSALASKATG+PIAK+AAKL++GY+LD++ NDIT+ TPASFEP++DYVV K+PRF
Sbjct: 302  PRVSRSSALASKATGYPIAKVAAKLALGYTLDELRNDITRDTPASFEPTLDYVVVKVPRF 361

Query: 448  AFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDWE 507
             FEKFP ++  LTT M+SVGE MA+GRTF E++ KALRS+E G  G     +     + E
Sbjct: 362  NFEKFPKADRTLTTSMRSVGEVMAIGRTFPEAYMKALRSMELGRVGLESPELPTEKEERE 421

Query: 508  Q-LKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLL-TQS 565
            + L   LRVP P+R   +  A ++GM V+++H+LS ID WFL   + L+   Q L     
Sbjct: 422  KVLHEGLRVPRPERPWFVAQAFREGMTVEQVHQLSAIDPWFLRHIEALVREAQSLADIGR 481

Query: 566  VSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANT 625
            + ++  D   + K  GFSDK +       E EVR  R + G+ P +KRVDTCAAEFEA T
Sbjct: 482  LDHLADDVLRQAKAHGFSDKYLGNLMGYPEAEVRAHRHARGIRPVFKRVDTCAAEFEAYT 541

Query: 626  PYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNS 685
            PY+YS+Y+ E E+ PT ++KVLILG GP RIGQGIEFDY C H +F+L+ AGYET+M+N 
Sbjct: 542  PYLYSTYEEEDEAPPTDRQKVLILGSGPIRIGQGIEFDYACVHAAFALREAGYETVMVNC 601

Query: 686  NPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEH 745
            NPETVSTDYDTSDRLYFEPLT+EDVL V   E+P G IVQFGGQTPL+LS+P    L++ 
Sbjct: 602  NPETVSTDYDTSDRLYFEPLTIEDVLEVSQREKPVGAIVQFGGQTPLRLSVP----LEQA 657

Query: 746  RLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEI 805
             LP         I GTSPD+ID AEDRE+F  +I++L ++QP+ G+A+S A+A  +A+ I
Sbjct: 658  GLP---------ILGTSPDAIDRAEDREKFAKLIEKLGLKQPENGVARSHAEAFKVAERI 708

Query: 806  GYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALA 865
            GYPV+VRPSYVLGGRAME VY   +L  Y+  AV   PE PVLID++L DAIE+D+D +A
Sbjct: 709  GYPVMVRPSYVLGGRAMETVYDAASLERYMREAVSASPEHPVLIDRFLKDAIEVDLDLVA 768

Query: 866  DSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMN 925
            D  G V+IGG++EHI++AGVHSGD+A  +P  ++S   ++ +    I +A+ L V GLMN
Sbjct: 769  DRTGQVLIGGVLEHIQEAGVHSGDAAATLPPHSLSPDLVERMKDQAISMARELGVVGLMN 828

Query: 926  CQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPK 985
             Q+AI    ++Y+LE NPRASRTVPF+SKA G P+AK AAL M GK+L +LG T+E   +
Sbjct: 829  VQFAIQGK-NIYILEVNPRASRTVPFISKATGVPMAKIAALCMVGKTLKELGRTEEPEFR 887

Query: 986  HVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVF 1045
            HV+VKE+V PF +F G DV+LGPEM+STGEVMG+   +  AFAK+Q+AAG KLP SG VF
Sbjct: 888  HVAVKESVFPFARFAGVDVILGPEMKSTGEVMGLAEDYASAFAKSQLAAGVKLPKSGRVF 947

Query: 1046 LSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVA 1105
            +S+ D  KP +  +AK    +GF + +T+GT  +L  KGI  +RV K+ EGRP+  D + 
Sbjct: 948  ISVKDEDKPAVVDLAKRLRSMGFSLTATAGTHDYLLTKGIESQRVQKVKEGRPNIVDKIV 1007

Query: 1106 NGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTVTMT 1165
            +G+I +++ T+ G   +  D   +RR  L + VP  TTV  A     A+ SLK + + + 
Sbjct: 1008 DGEIVLVINTTFGKQ-EIADSFSIRREALMHSVPYYTTVQAARMAVGALESLKRSELAVK 1066

Query: 1166 ALQDFF 1171
             LQ + 
Sbjct: 1067 PLQAYL 1072


>gi|452746370|ref|ZP_21946191.1| carbamoyl phosphate synthase large subunit [Pseudomonas stutzeri
            NF13]
 gi|452009767|gb|EME01979.1| carbamoyl phosphate synthase large subunit [Pseudomonas stutzeri
            NF13]
          Length = 1073

 Score = 1284 bits (3323), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 635/1085 (58%), Positives = 814/1085 (75%), Gaps = 22/1085 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILILGAGPIVIGQACEFDYSG QACKALKEEG+ VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIKSILILGAGPIVIGQACEFDYSGAQACKALKEEGFRVILVNSNPATIMTDPAMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+    V +++EKERPDALLPTMGGQTALN A+ L + G LEK+GVE+IGA  D 
Sbjct: 63   ATYIEPIKWATVAKIIEKERPDALLPTMGGQTALNCALDLEKHGILEKFGVEMIGANADT 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  F +AMK IG+  P SGI + ++E   + +++G FP IIRP+FT+GGTGGGI
Sbjct: 123  IDKAEDRSRFDKAMKDIGLACPVSGIAHNMEEAYGVLDKVG-FPCIIRPSFTMGGTGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEFE IC  GL  S TS++L+++SL+GWKEYE+EV+RD  DN +I+CSIEN DPMG
Sbjct: 182  AYNREEFEEICARGLDLSPTSELLIDESLIGWKEYEMEVVRDKKDNCIIVCSIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGVE GGSNVQF + P  G ++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQIMRNASLAVLREIGVETGGSNVQFGICPNTGRMVVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT  +TPASFEP+IDYVVTK+PR
Sbjct: 302  PRVSRSSALASKATGFPIAKIAAKLAVGYTLDELQNDITGGRTPASFEPAIDYVVTKVPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            FAFEKFP ++  LTTQMKSVGE MA+GRTFQES QKALR LE G +G+    +   D + 
Sbjct: 362  FAFEKFPKADARLTTQMKSVGEVMAIGRTFQESMQKALRGLEVGATGFD-PKLNLADAEA 420

Query: 507  EQ-LKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQS 565
            E  LK  L VP  DR+  +  A + G  V+++  L+ ID WFL Q ++L+  E+ + T  
Sbjct: 421  ESTLKRELTVPGADRIWYVADAFRAGKSVEDVFALTKIDPWFLVQIEDLVKDEERVKTLG 480

Query: 566  VSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANT 625
            +S++ +D  Y++KR+GFSD ++A     TEK +R  R  L V+P YKRVDTCAAEF  +T
Sbjct: 481  LSSIDRDMMYKLKRKGFSDARLAKLLGVTEKNLRSHRHKLKVLPVYKRVDTCAAEFATDT 540

Query: 626  PYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNS 685
             YMYS+Y+ ECE+ P+ ++K++ILGGGPNRIGQGIEFDYCC H + +++  GYETIM+N 
Sbjct: 541  AYMYSTYEEECEANPSTREKIMILGGGPNRIGQGIEFDYCCVHAALAMREDGYETIMVNC 600

Query: 686  NPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEH 745
            NPETVSTDYDTSDRLYFEP+T+EDVL ++ +E+P+G+IVQ+GGQTPLK    I + L+E 
Sbjct: 601  NPETVSTDYDTSDRLYFEPVTLEDVLEIVRVEQPKGVIVQYGGQTPLK----ICRALEEA 656

Query: 746  RLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEI 805
             +P         I GTSPD+ID AEDRERF  +++ L++ QP+   A+SE +A+A +K I
Sbjct: 657  GVP---------IIGTSPDAIDRAEDRERFQQMVQRLNLRQPQNATARSEEEAIAASKAI 707

Query: 806  GYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALA 865
            GYP+VVRPSYVLGGRAMEIVY +E L  Y+  AV+V  + PVL+D +L+ AIE+DVDA+ 
Sbjct: 708  GYPLVVRPSYVLGGRAMEIVYEEEELKRYMREAVQVSNDSPVLLDHFLNCAIEVDVDAVC 767

Query: 866  DSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMN 925
            D    VVIGGIM+HIEQAGVHSGDSAC +P  ++     D I     K+A  L+V GLMN
Sbjct: 768  DG-ETVVIGGIMQHIEQAGVHSGDSACSLPAYSLPQHIQDEIREQVRKMALELDVVGLMN 826

Query: 926  CQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPK 985
             Q A+    D+Y+LE NPRASRTVPFVSK IG  LAK AA VM+GKSL ++GFT+E+IP 
Sbjct: 827  VQMAVQGE-DIYVLEVNPRASRTVPFVSKCIGESLAKVAARVMAGKSLAEVGFTREIIPT 885

Query: 986  HVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVF 1045
            + SVKEAV PF KF G D +LGPEM+STGEVMG+  SF  AFAKAQ+ A + LP SG  F
Sbjct: 886  YFSVKEAVFPFAKFPGVDTILGPEMKSTGEVMGVGDSFAEAFAKAQLGASEILPTSGCAF 945

Query: 1046 LSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVA 1105
            LS+ +  KP++E++A+  + +GF++V+T+GTA  +E  G+ V RV K+ EGRPH  DM+ 
Sbjct: 946  LSVREDDKPYVEQVARDLVGLGFEVVATAGTARIIEAAGLPVRRVNKVTEGRPHVVDMIK 1005

Query: 1106 NGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTVTMT 1165
            N ++ +++ T+ G      D   +RR  L +K+ + TT++G  A  EA++     TV   
Sbjct: 1006 NDEVTLVINTTEGRQ-SIADSYSIRRNALQHKICITTTIAGGQAICEALKFGPEKTVRR- 1063

Query: 1166 ALQDF 1170
             LQD 
Sbjct: 1064 -LQDL 1067


>gi|289207884|ref|YP_003459950.1| carbamoyl-phosphate synthase, large subunit [Thioalkalivibrio sp.
            K90mix]
 gi|288943515|gb|ADC71214.1| carbamoyl-phosphate synthase, large subunit [Thioalkalivibrio sp.
            K90mix]
          Length = 1077

 Score = 1284 bits (3322), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 646/1088 (59%), Positives = 812/1088 (74%), Gaps = 28/1088 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILILGAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIQSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  E V +++EKERPDA+LPTMGGQTALN A+ L+  G LEKYGVE+IGA   A
Sbjct: 63   ATYIEPVEWETVAKIIEKERPDAVLPTMGGQTALNCALDLSREGVLEKYGVEMIGANEAA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I  AEDRD FK AM  IG+ TP + + ++ +E   I  +IG FP+IIRP+FTLGG+GGGI
Sbjct: 123  IDMAEDRDHFKAAMADIGLDTPTAMLAHSWEEAQEIQPKIG-FPVIIRPSFTLGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEFE I K GL  S  +QVL+E+S LGWKE+E+EV+RD ADN +IICSIEN+DPMG
Sbjct: 182  AYNREEFEYIVKNGLDLSPVNQVLLEESALGWKEFEMEVVRDKADNCIIICSIENLDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            +HTGDSITVAPAQTLTDKEYQ +RD S+A++R+IGVE GGSNVQFA+NP +G ++VIEMN
Sbjct: 242  IHTGDSITVAPAQTLTDKEYQIMRDASLAVLRKIGVETGGSNVQFAINPENGRMIVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKK-TPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ N+IT   TPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGYTLDELKNEITGGLTPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            F FEKFP +E  LTTQMK+VGEAMA+GRTFQESFQKALRS+E G  G      + +D   
Sbjct: 362  FTFEKFPQAEARLTTQMKAVGEAMAIGRTFQESFQKALRSMETGMDGLD----ERIDLAA 417

Query: 507  E----QLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLL 562
            E    QL+  L  P+PD++  +  A + G  + +I +L+ ID WFL Q +EL+DVE+ L 
Sbjct: 418  EDVVDQLRTKLANPSPDQVLYVADAFRAGFSIKDIFDLTAIDPWFLAQIQELVDVEKGLK 477

Query: 563  TQSVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFE 622
             + + ++  ++ Y +K+RGFSD ++A     TEK VR+ R  LGV P YKRVDTCAAEF 
Sbjct: 478  DRILGDIAAEEMYRLKQRGFSDLRLAKLLNETEKAVRKHRHKLGVRPVYKRVDTCAAEFA 537

Query: 623  ANTPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIM 682
              T YMYSSY+ E E+ PT K+K+++LGGGPNRIGQGIEFDYCC H + +++   YETIM
Sbjct: 538  TTTAYMYSSYEEENEAEPTDKQKIMVLGGGPNRIGQGIEFDYCCVHAALAMREDKYETIM 597

Query: 683  MNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYL 742
            +N NPETVSTDYDTSDRLYFEPLT+EDVL V++ E+P G+IVQ+GGQTPLKL+       
Sbjct: 598  VNCNPETVSTDYDTSDRLYFEPLTLEDVLEVVETEKPVGVIVQYGGQTPLKLA------- 650

Query: 743  DEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIA 802
               R   A+G   V I GTSPDSID AEDRERF A++ +L ++QP    A+SE +A  +A
Sbjct: 651  ---RDLEAAG---VPIIGTSPDSIDLAEDRERFQALLHKLGLKQPPNRTARSEEEAEKLA 704

Query: 803  KEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVD 862
             EIGYP+VVRPSYVLGGRAMEIV   E L +Y++NAV V  + PVL+D++L DAIE+DVD
Sbjct: 705  DEIGYPLVVRPSYVLGGRAMEIVRDREDLRSYMQNAVSVSNDAPVLLDRFLDDAIEVDVD 764

Query: 863  ALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCG 922
            A+ D   NV+IGGIMEHIEQAGVHSGDSAC +P  ++S    D +     K+A  L V G
Sbjct: 765  AICDG-ENVIIGGIMEHIEQAGVHSGDSACSLPPFSLSLELQDAMVEQVRKMALGLKVVG 823

Query: 923  LMNCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEV 982
            LMN Q+AI    D+Y+LE NPRASRTVP+VSKA+G PLAK AA  M+G++L + G    V
Sbjct: 824  LMNTQFAI-KGDDIYVLEVNPRASRTVPYVSKAVGRPLAKIAARCMAGQTLAEQGVGDAV 882

Query: 983  IPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSG 1042
             P++ SVKE+V PF KFQG D +LGPEM+STGEVMG+  SF  AFAK+Q+ AG  LP +G
Sbjct: 883  YPEYYSVKESVFPFAKFQGVDPILGPEMKSTGEVMGVGRSFAEAFAKSQLGAGVLLPSTG 942

Query: 1043 TVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGD 1102
              F+S+ ++ KPH+  +A+  +++GF++++T GTA  L+   IAV RV K+ EGRPH  D
Sbjct: 943  KAFVSVREIDKPHVAEVARRLVELGFEVLATRGTAKILDEADIAVTRVNKVTEGRPHIVD 1002

Query: 1103 MVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTV 1162
            M+ N +I  ++ T  G      D   +RR  L +KV   TT++GA A  +A+  L +N V
Sbjct: 1003 MIKNDEISFIINTVEGKQ-STSDSYTIRREALMHKVGYTTTIAGARATVQALDHLGANDV 1061

Query: 1163 TMTALQDF 1170
                LQD 
Sbjct: 1062 FR--LQDL 1067



 Score =  237 bits (605), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 163/488 (33%), Positives = 264/488 (54%), Gaps = 43/488 (8%)

Query: 35  LYSNKKTGSLSLR-----SWPPQLTRYSRSR--VRASSAKIDS-SAELSNGAA----SSK 82
           +Y  K+ G   LR     +   +  R  R +  VR    ++D+ +AE +   A    S +
Sbjct: 489 MYRLKQRGFSDLRLAKLLNETEKAVRKHRHKLGVRPVYKRVDTCAAEFATTTAYMYSSYE 548

Query: 83  DQKLGKRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTD 142
           ++   + TD +KI++LG GP  IGQ  EFDY    A  A++E+ YE I++N NP T+ TD
Sbjct: 549 EENEAEPTDKQKIMVLGGGPNRIGQGIEFDYCCVHAALAMREDKYETIMVNCNPETVSTD 608

Query: 143 PGLADRTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIG 202
              +DR Y  P+T E V +V+E E+P  ++   GGQT L LA        LE  GV +IG
Sbjct: 609 YDTSDRLYFEPLTLEDVLEVVETEKPVGVIVQYGGQTPLKLA------RDLEAAGVPIIG 662

Query: 203 AKLDAIKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGG 262
              D+I  AEDR+ F+  +  +G+K PP+    + +E   +A+EIG +PL++RP++ LGG
Sbjct: 663 TSPDSIDLAEDRERFQALLHKLGLKQPPNRTARSEEEAEKLADEIG-YPLVVRPSYVLGG 721

Query: 263 TGGGIAYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIEN 322
               I  ++E+  +  +  ++ S  + VL+++ L    E +++ + D  +NV+I   +E+
Sbjct: 722 RAMEIVRDREDLRSYMQNAVSVSNDAPVLLDRFLDDAIEVDVDAICD-GENVIIGGIMEH 780

Query: 323 VDPMGVHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVE---CGGSNVQFAVNPVDG 379
           ++  GVH+GDS    P  +L+      L+D  +  +R++ +     G  N QFA+   D 
Sbjct: 781 IEQAGVHSGDSACSLPPFSLS----LELQDAMVEQVRKMALGLKVVGLMNTQFAIKGDD- 835

Query: 380 EVMVIEMNPRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDY 439
            + V+E+NPR SR+    SKA G P+AK+AA+   G +L +      +    +  P  +Y
Sbjct: 836 -IYVLEVNPRASRTVPYVSKAVGRPLAKIAARCMAGQTLAE------QGVGDAVYP--EY 886

Query: 440 VVTKIPRFAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGF----SGWG 495
              K   F F KF G +P+L  +MKS GE M +GR+F E+F K+   L  G     +G  
Sbjct: 887 YSVKESVFPFAKFQGVDPILGPEMKSTGEVMGVGRSFAEAFAKS--QLGAGVLLPSTGKA 944

Query: 496 CSNVKELD 503
             +V+E+D
Sbjct: 945 FVSVREID 952


>gi|421616631|ref|ZP_16057634.1| carbamoyl phosphate synthase large subunit [Pseudomonas stutzeri
            KOS6]
 gi|409781383|gb|EKN60983.1| carbamoyl phosphate synthase large subunit [Pseudomonas stutzeri
            KOS6]
          Length = 1073

 Score = 1284 bits (3322), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 633/1085 (58%), Positives = 813/1085 (74%), Gaps = 22/1085 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILILGAGPIVIGQACEFDYSG QACKALKEEG+ VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIKSILILGAGPIVIGQACEFDYSGAQACKALKEEGFRVILVNSNPATIMTDPAMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+    V +++EKERPDALLPTMGGQTALN A+ L + G L K+GVE+IGA  D 
Sbjct: 63   ATYIEPIKWATVAKIIEKERPDALLPTMGGQTALNCALDLEKHGVLAKFGVEMIGANADT 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  F +AMK IG+  P SGI + ++E   + +++G FP IIRP+FT+GGTGGGI
Sbjct: 123  IDKAEDRSRFDKAMKNIGLACPVSGIAHNMEEAYGVLDKVG-FPCIIRPSFTMGGTGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEFE IC  GL  S TS++L+++SL+GWKEYE+EV+RD  DN +I+CSIEN DPMG
Sbjct: 182  AYNREEFEEICARGLDLSPTSELLIDESLIGWKEYEMEVVRDKKDNCIIVCSIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ LR+ S+A++REIGVE GGSNVQF + P  G ++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQILRNASLAVLREIGVETGGSNVQFGICPDTGRMVVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT  +TPASFEP+IDYVVTK+PR
Sbjct: 302  PRVSRSSALASKATGFPIAKIAAKLAVGYTLDELSNDITGGRTPASFEPAIDYVVTKVPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            FAFEKFP ++  LTTQMKSVGE MA+GRTFQES QKALR LE G +G+    +   D + 
Sbjct: 362  FAFEKFPKADARLTTQMKSVGEVMAIGRTFQESMQKALRGLEVGATGFD-PKLNLADAEA 420

Query: 507  EQ-LKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQS 565
            E  LK  L VP  DR+  +  A + G  V+++  L+ ID WFL Q ++L+  E+ + T  
Sbjct: 421  ESTLKRELTVPGADRIWFVADAFRAGKSVEDVFALTKIDPWFLVQIEDLVKDEEHVKTLG 480

Query: 566  VSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANT 625
            +S++ +D  Y +KR+GFSD ++A     TEK +R  R  L V+P YKRVDTCAAEF  +T
Sbjct: 481  LSSIDRDMMYRLKRKGFSDARLAKLLGVTEKNLRSHRHKLKVLPVYKRVDTCAAEFATDT 540

Query: 626  PYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNS 685
             YMYS+Y+ ECE+ P+ ++K++ILGGGPNRIGQGIEFDYCC H + +++  GYETIM+N 
Sbjct: 541  AYMYSTYEEECEANPSSREKIMILGGGPNRIGQGIEFDYCCVHAALAMREDGYETIMVNC 600

Query: 686  NPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEH 745
            NPETVSTDYDTSDRLYFEP+T+EDVL ++ +E+P+G+IVQ+GGQTPLK    I + L+E 
Sbjct: 601  NPETVSTDYDTSDRLYFEPVTLEDVLEIVRVEQPKGVIVQYGGQTPLK----ICRALEEA 656

Query: 746  RLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEI 805
             +P         I GTSPD+ID AEDRERF  +++ L++ QP+   A+SE +A+A +K I
Sbjct: 657  GVP---------IIGTSPDAIDRAEDRERFQQMVQRLNLRQPQNATARSEEEAIAASKAI 707

Query: 806  GYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALA 865
            GYP+VVRPSYVLGGRAMEIVY +E L  Y+  AV+V  + PVL+D +L+ AIE+D+DA+ 
Sbjct: 708  GYPLVVRPSYVLGGRAMEIVYEEEELKRYMREAVQVSNDSPVLLDHFLNCAIEVDIDAVC 767

Query: 866  DSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMN 925
            D   +VVIGGIM+HIEQAGVHSGDSAC +P  ++     D I     K+A  L+V GLMN
Sbjct: 768  DGT-DVVIGGIMQHIEQAGVHSGDSACSLPAYSLPQHIQDEIREQVRKMALELDVIGLMN 826

Query: 926  CQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPK 985
             Q A+    D+Y+LE NPRASRTVPFVSK IG  LAK AA VM+GK+L ++GFT+E+IP 
Sbjct: 827  VQMAVQGE-DIYVLEVNPRASRTVPFVSKCIGESLAKVAARVMAGKTLEEVGFTREIIPT 885

Query: 986  HVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVF 1045
            + SVKEAV PF KF G D +LGPEM+STGEVMG+  SF  AFAKAQ+ A + LP SG  F
Sbjct: 886  YFSVKEAVFPFAKFPGVDTILGPEMKSTGEVMGVGDSFAEAFAKAQLGASEILPTSGCAF 945

Query: 1046 LSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVA 1105
            LS+ +  KP++E++A+  + +GF++V+T+GTA  +E  G+ V RV K+ EGRPH  DM+ 
Sbjct: 946  LSVREDDKPYVEQVARDLVGLGFEVVATAGTARIIEAAGLPVRRVNKVTEGRPHVVDMIK 1005

Query: 1106 NGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTVTMT 1165
            N ++ +++ T+ G      D   +RR  L +K+ + TT++G  A  EA++     TV   
Sbjct: 1006 NDEVTLVINTTEGRQ-SIADSYSIRRNALQHKICITTTIAGGQAICEALKFGPEKTVRR- 1063

Query: 1166 ALQDF 1170
             LQD 
Sbjct: 1064 -LQDL 1067


>gi|149927093|ref|ZP_01915351.1| carbamoyl-phosphate synthase large subunit [Limnobacter sp. MED105]
 gi|149824314|gb|EDM83534.1| carbamoyl-phosphate synthase large subunit [Limnobacter sp. MED105]
          Length = 1076

 Score = 1283 bits (3321), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 633/1077 (58%), Positives = 822/1077 (76%), Gaps = 27/1077 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KR DL+ ILI+GAGPIVIGQACEFDYSG QACKAL+EEGY+V+L+NSNPATIMTDP +AD
Sbjct: 3    KRNDLKTILIIGAGPIVIGQACEFDYSGAQACKALREEGYKVVLVNSNPATIMTDPEMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+T ++VE+++EKERPDA+LPTMGGQTALN A+ LA+ G L KY VELIGAK +A
Sbjct: 63   VTYIEPITWQVVERIIEKERPDAVLPTMGGQTALNCALDLAKHGVLAKYNVELIGAKEEA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECIS----IANEIGE--FPLIIRPAFTLG 261
            I+KAEDR  FK AM +IG+ +  SG+ ++++E +     IA E+G   FP+IIRP+FTLG
Sbjct: 123  IEKAEDRLKFKNAMTSIGLDSAKSGVAHSMEEALEVQARIAKEVGSNGFPVIIRPSFTLG 182

Query: 262  GTGGGIAYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIE 321
            GTGGGIAYN EEFE IC+ GL AS T+++L+E+SL+GWKEYE+EV+RD ADN +I+CSIE
Sbjct: 183  GTGGGIAYNAEEFETICRRGLEASPTNELLIEESLIGWKEYEMEVVRDSADNCIIVCSIE 242

Query: 322  NVDPMGVHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEV 381
            N+DPMGVHTGDSITVAPAQTLTD+EYQ +R+ SIAI+REIGV+ GGSNVQF++NP +G +
Sbjct: 243  NLDPMGVHTGDSITVAPAQTLTDREYQLMRNASIAILREIGVDTGGSNVQFSINPANGRM 302

Query: 382  MVIEMNPRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKK-TPASFEPSIDYV 440
            +VIEMNPRVSRSSALASKATGFPIAK+AAKLSVGY+LD++ NDIT   TPASFEPSIDYV
Sbjct: 303  IVIEMNPRVSRSSALASKATGFPIAKVAAKLSVGYTLDELKNDITGGLTPASFEPSIDYV 362

Query: 441  VTKIPRFAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVK 500
            VTKIPRFAFEKFP ++  LTTQMKSVGE MA+GRTFQESFQKALR LE G  G     + 
Sbjct: 363  VTKIPRFAFEKFPTADDRLTTQMKSVGEVMAMGRTFQESFQKALRGLEVGVDG-----LN 417

Query: 501  ELDWDWEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQF 560
            +   D E ++  L  P P+R+  +  A  +G  ++E+H+L+ ID+WFL Q +++++ E  
Sbjct: 418  QKTTDREVIERELGEPGPERIFYVGDAFAQGFSLEEVHQLTKIDRWFLIQIQDIVETELE 477

Query: 561  LLTQSVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAE 620
            L T++++++T+     +KR+GFSD+++A+    +E E+R+ R    V P YKRVDTCAAE
Sbjct: 478  LETKTLADLTEPVLRLLKRKGFSDRRLAYLLDVSEAEIRKLRHQHNVRPVYKRVDTCAAE 537

Query: 621  FEANTPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYET 680
            F+  T YMYS+Y+ ECE+APT KKK+++LGGGPNRIGQGIEFDYCC H + +L+  GYET
Sbjct: 538  FKTGTAYMYSTYEEECEAAPTDKKKIIVLGGGPNRIGQGIEFDYCCVHAAMALREDGYET 597

Query: 681  IMMNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQ 740
            IM+N NPETVSTDYDTSDRLYFEPLT+EDVL ++ +E+P G+IVQ+GGQTPLKL+    +
Sbjct: 598  IMVNCNPETVSTDYDTSDRLYFEPLTLEDVLEIVAIEKPVGVIVQYGGQTPLKLA----K 653

Query: 741  YLDEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALA 800
             L+ + +P         I GTSP+SID AEDRERF  ++ +L++ QP    A++EA+A+A
Sbjct: 654  SLEANGVP---------IIGTSPESIDIAEDRERFQKLLTKLNLRQPPNRTARTEAEAIA 704

Query: 801  IAKEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEID 860
             A+EIGYP+VVRPSYVLGGRAMEIV+  + L  Y+  AV+V  + PVL+D++L+DAIE+D
Sbjct: 705  HAQEIGYPLVVRPSYVLGGRAMEIVHEQKDLERYMREAVKVSNDSPVLLDRFLNDAIEVD 764

Query: 861  VDALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNV 920
            VDAL D    V+IGG+MEHIEQAGVHSGDSAC +P  ++S+  +  +   +  +AK LNV
Sbjct: 765  VDALCDG-QTVMIGGVMEHIEQAGVHSGDSACCLPPYSLSADMVTELKRQSELMAKALNV 823

Query: 921  CGLMNCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTK 980
             GLMN Q+AI     VY+LE NPRASRTVP+VSKA G  LAK AA  M+G++  D G T+
Sbjct: 824  IGLMNVQFAIQND-TVYVLEVNPRASRTVPYVSKATGKQLAKIAARCMAGRTFADQGITE 882

Query: 981  EVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPL 1040
              +PK+ SVKEAV PF KF G D +LGPEM+STGEVMG+  +F  AF K+Q+AA  KLP 
Sbjct: 883  IPVPKYFSVKEAVFPFVKFPGVDTILGPEMKSTGEVMGVGRTFGEAFVKSQLAASVKLPE 942

Query: 1041 SGTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHA 1100
             GT F+S+    K H  ++AK  +D+GFKI++T GTA  +   GI    V K+ EGRP+ 
Sbjct: 943  GGTAFISVKTEDKKHTVKLAKGLIDLGFKIIATRGTAAAIAEGGIECTVVNKVLEGRPNI 1002

Query: 1101 GDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSL 1157
             DM+ NG++Q++V T         D   +R   L+ +V + TT++GALA+ E ++ L
Sbjct: 1003 VDMLKNGEVQLVVNTVEERRSAINDSRYIRTTSLSSRVTIFTTMAGALASVEGMKHL 1059


>gi|392419887|ref|YP_006456491.1| carbamoyl phosphate synthase large subunit [Pseudomonas stutzeri CCUG
            29243]
 gi|390982075|gb|AFM32068.1| carbamoyl phosphate synthase large subunit [Pseudomonas stutzeri CCUG
            29243]
          Length = 1073

 Score = 1283 bits (3321), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 633/1085 (58%), Positives = 814/1085 (75%), Gaps = 22/1085 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILILGAGPIVIGQACEFDYSG QACKALKEEG+ VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIKSILILGAGPIVIGQACEFDYSGAQACKALKEEGFRVILVNSNPATIMTDPAMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+    V +++EKERPDALLPTMGGQTALN A+ L + G LEK+GVE+IGA  D 
Sbjct: 63   ATYIEPIKWATVAKIIEKERPDALLPTMGGQTALNCALDLEKHGILEKFGVEMIGANADT 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  F +AMK IG+  P SGI + ++E   + +++G FP IIRP+FT+GGTGGGI
Sbjct: 123  IDKAEDRSRFDKAMKDIGLACPVSGIAHNMEEAYGVLDKVG-FPCIIRPSFTMGGTGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEFE IC  GL  S TS++L+++SL+GWKEYE+EV+RD  DN +I+CSIEN DPMG
Sbjct: 182  AYNREEFEEICARGLDLSPTSELLIDESLIGWKEYEMEVVRDKKDNCIIVCSIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ LR+ S+A++REIGVE GGSNVQF + P  G ++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQILRNASLAVLREIGVETGGSNVQFGICPDTGRMVVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT  +TPASFEP+IDYVVTK+PR
Sbjct: 302  PRVSRSSALASKATGFPIAKIAAKLAVGYTLDELQNDITGGRTPASFEPAIDYVVTKVPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            FAFEKFP ++  LTTQMKSVGE MA+GRTFQES QKALR LE G +G+    +   D + 
Sbjct: 362  FAFEKFPKADARLTTQMKSVGEVMAIGRTFQESMQKALRGLEVGATGFD-PKLNLADAEA 420

Query: 507  EQ-LKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQS 565
            E  LK  L VP  DR+  +  A + G  V+++  L+ ID WFL Q ++L+  E+ + T  
Sbjct: 421  ESTLKRELTVPGADRIWYVADAFRAGKSVEDVFALTKIDPWFLVQIEDLVKDEEHVKTLG 480

Query: 566  VSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANT 625
            +S++ +D  Y++KR+GFSD ++A     TEK +R  R  L V+P YKRVDTCAAEF  +T
Sbjct: 481  LSSIDRDLMYKLKRKGFSDARLAKLLGVTEKNLRSHRHKLKVLPVYKRVDTCAAEFATDT 540

Query: 626  PYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNS 685
             YMYS+Y+ ECE+ P+ + K++ILGGGPNRIGQGIEFDYCC H + +++  GYETIM+N 
Sbjct: 541  AYMYSTYEEECEANPSNRDKIMILGGGPNRIGQGIEFDYCCVHAALAMREDGYETIMVNC 600

Query: 686  NPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEH 745
            NPETVSTDYDTSDRLYFEP+T+EDVL ++ +E+P+G+IVQ+GGQTPLK    I + L+E 
Sbjct: 601  NPETVSTDYDTSDRLYFEPVTLEDVLEIVRVEQPKGVIVQYGGQTPLK----ICRALEEA 656

Query: 746  RLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEI 805
             +P         I GTSPD+ID AEDRERF  +++ L++ QP+   A+SE +A+A +K I
Sbjct: 657  GVP---------IIGTSPDAIDRAEDRERFQQMVQRLNLRQPQNATARSEEEAIAASKAI 707

Query: 806  GYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALA 865
            GYP+VVRPSYVLGGRAMEIVY +E L  Y+  AV+V  + PVL+D +L+ AIE+D+DA+ 
Sbjct: 708  GYPLVVRPSYVLGGRAMEIVYEEEELKRYMREAVQVSNDSPVLLDHFLNCAIEVDIDAVC 767

Query: 866  DSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMN 925
            D   +VVIGGIM+HIEQAGVHSGDSAC +P  ++     D I     K+A  L+V GLMN
Sbjct: 768  DGT-DVVIGGIMQHIEQAGVHSGDSACSLPAYSLPQHIQDEIRDQVRKMALELDVIGLMN 826

Query: 926  CQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPK 985
             Q A+    D+Y+LE NPRASRTVPFVSK IG  LAK AA VM+GK+L ++GFT+E+IP 
Sbjct: 827  VQMAVQGE-DIYVLEVNPRASRTVPFVSKCIGESLAKVAARVMAGKTLKEIGFTREIIPT 885

Query: 986  HVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVF 1045
            + SVKEAV PF KF G D +LGPEM+STGEVMG+  SF  AFAKAQ+ A + LP +G  F
Sbjct: 886  YYSVKEAVFPFAKFPGVDTILGPEMKSTGEVMGVGDSFAEAFAKAQLGASEILPTTGCAF 945

Query: 1046 LSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVA 1105
            LS+ +  KP++E++A+  + +GF++V+T+GTA  +E  G+ V RV K+ EGRPH  DM+ 
Sbjct: 946  LSVREDDKPYVEQVARDLVGLGFEVVATAGTARIIEAAGLPVRRVNKVTEGRPHVVDMIK 1005

Query: 1106 NGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTVTMT 1165
            N ++ +++ T+ G      D   +RR  L +K+ + TT++G  A  EA++     TV   
Sbjct: 1006 NDEVTLVINTTEGRQ-SIADSYSIRRNALQHKICITTTIAGGQAICEALKFGPEKTVRR- 1063

Query: 1166 ALQDF 1170
             LQD 
Sbjct: 1064 -LQDL 1067


>gi|152980458|ref|YP_001353932.1| carbamoyl-phosphate synthase large subunit [Janthinobacterium sp.
            Marseille]
 gi|151280535|gb|ABR88945.1| carbamoyl-phosphate synthase large chain [Janthinobacterium sp.
            Marseille]
          Length = 1076

 Score = 1283 bits (3319), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 637/1078 (59%), Positives = 810/1078 (75%), Gaps = 28/1078 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KR+D++ ILI+GAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRSDIKSILIIGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+T + VE++++KERPDA+LPTMGGQTALN A+ L  +G L KY  ELIGA  +A
Sbjct: 63   VTYIEPITWQAVERIIDKERPDAILPTMGGQTALNCALDLHHNGVLTKYKCELIGASPEA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  FK AM  IG+ +  SG+ +TL+E  ++  E+G FP+IIRP+FT+GG+GGGI
Sbjct: 123  IDKAEDRSKFKDAMTKIGLGSARSGVSHTLEESWAVQKELG-FPVIIRPSFTMGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN EEFEAICK GL AS TS++L+E+SL+GWKE+E+EV+RD ADN +I+CSIEN+DPMG
Sbjct: 182  AYNAEEFEAICKRGLEASPTSELLIEESLIGWKEFEMEVVRDKADNCIIVCSIENLDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ +R+ SIA++REIGV+ GGSNVQF++NP DG ++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQIMRNASIAVLREIGVDTGGSNVQFSINPADGRMIVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITK-KTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VG++LD++ N+IT   TPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKIAAKLAVGFTLDELRNEITGGATPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            FAFEKFP ++  LTTQMKSVGE MA+GRTFQESFQKALR LE G  G     + E   D 
Sbjct: 362  FAFEKFPQADSHLTTQMKSVGEVMAIGRTFQESFQKALRGLEVGVDG-----MNEKTTDR 416

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
            E ++  L  P P+R+  +  A  +G  ++E+H L+ ID WFL Q KE++D+E +L TQ++
Sbjct: 417  ETIEEELGEPGPERIWYVGDAFAQGFSLEEVHALTHIDPWFLAQIKEIVDIELWLETQAL 476

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
            S + KD  +++K++GF+D+++A   K+T+K VRE+R ++ + P YKRVDTCA EF  NT 
Sbjct: 477  SAIDKDTLFKLKQKGFADRRLAKLLKTTDKAVREQRHAMNIRPVYKRVDTCAGEFATNTA 536

Query: 627  YMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSN 686
            YMYS+Y+ ECES PT KKK+++LGGGPNRIGQGIEFDYCC H + +++  GYETIM+N N
Sbjct: 537  YMYSTYEEECESQPTNKKKIMVLGGGPNRIGQGIEFDYCCVHAALAMREDGYETIMVNCN 596

Query: 687  PETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHR 746
            PETVSTDYDTSDRLYFEPLT+EDVL ++ LE+P G+IVQ+GGQTPLKL+L +        
Sbjct: 597  PETVSTDYDTSDRLYFEPLTLEDVLEIVALEKPYGVIVQYGGQTPLKLALDLE------- 649

Query: 747  LPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEIG 806
               A+G   V I GTSPD IDAAEDRERF  ++ +L + QP    A++E DAL +A+EIG
Sbjct: 650  ---ANG---VPIVGTSPDMIDAAEDRERFQKMLHDLKLRQPPNRTARTEEDALRLAQEIG 703

Query: 807  YPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALAD 866
            YP+VVRPSYVLGGRAMEIV+    L  Y+  AV+V  + PVL+D++L+DAIE+DVD L+D
Sbjct: 704  YPLVVRPSYVLGGRAMEIVHEQRDLERYMREAVKVSHDSPVLLDRFLNDAIEVDVDCLSD 763

Query: 867  SCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNC 926
                  IGG+MEHIEQAGVHSGDSAC +P  ++S   +D +   T  +AK LNV GLMN 
Sbjct: 764  G-ERTFIGGVMEHIEQAGVHSGDSACSLPPYSLSQETIDELKRQTSLMAKGLNVVGLMNV 822

Query: 927  QYAITT-------SGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFT 979
            Q+AI            V++LE NPRASRTVP+VSKA G  LAK AA  M G+SL+  G  
Sbjct: 823  QFAIQQQEIDGKLQDVVFVLEVNPRASRTVPYVSKATGLQLAKIAARCMVGQSLDSQGII 882

Query: 980  KEVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLP 1039
             EV+P++ SVKEAV PF KF G D +LGPEM+STGEVMG+  +F  AF K+Q+ A  KLP
Sbjct: 883  NEVVPEYFSVKEAVFPFVKFPGVDTILGPEMKSTGEVMGVGKTFGEAFVKSQLGASIKLP 942

Query: 1040 LSGTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPH 1099
             SG VFLS+    KP   ++AK  ++IGF +V+T GTA  +   GI V+ V K+ EGRPH
Sbjct: 943  RSGKVFLSVKASDKPRAVQVAKDLVEIGFSVVATKGTAAAISAAGIEVQSVNKVAEGRPH 1002

Query: 1100 AGDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSL 1157
              DM+ N +I +++ T        +D   +R   LA +V   TT++GA A  E +  L
Sbjct: 1003 IVDMIKNNEIALVINTVEEKRSAIVDSRTIRTSALAARVTTYTTIAGAEAAVEGMAHL 1060


>gi|397688175|ref|YP_006525494.1| carbamoyl phosphate synthase large subunit [Pseudomonas stutzeri DSM
            10701]
 gi|395809731|gb|AFN79136.1| carbamoyl phosphate synthase large subunit [Pseudomonas stutzeri DSM
            10701]
          Length = 1073

 Score = 1283 bits (3319), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 629/1077 (58%), Positives = 813/1077 (75%), Gaps = 20/1077 (1%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILILGAGPIVIGQACEFDYSG QACKAL+EEG+ VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGFRVILVNSNPATIMTDPAMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  + V +++EKERPDALLPTMGGQTALN A+ L + G LEK+GVE+IGA  D 
Sbjct: 63   ATYIEPIKWQTVAKIIEKERPDALLPTMGGQTALNCALDLEKHGVLEKFGVEMIGANADT 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  F +AM+ IG+  P SGI + +DE   + +++G FP IIRP+FT+GGTGGGI
Sbjct: 123  IDKAEDRSRFDKAMRDIGLACPVSGIAHNMDEAYGVLDKVG-FPCIIRPSFTMGGTGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEFE IC  GL  S TS++L+++SL+GWKEYE+EV+RD  DN +I+CSIEN DPMG
Sbjct: 182  AYNREEFEEICARGLDLSPTSELLIDESLIGWKEYEMEVVRDKKDNCIIVCSIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGVE GGSNVQF ++P  G ++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQIMRNASLAVLREIGVETGGSNVQFGIHPDTGRMVVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT  +TPASFEP+IDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKIAAKLAVGYTLDELQNDITGGRTPASFEPAIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCS-NVKELDWD 505
            FAFEKFP ++  LTTQMKSVGE MA+GRTFQES QKALR LE G +G+    N+ + + +
Sbjct: 362  FAFEKFPKADARLTTQMKSVGEVMAIGRTFQESVQKALRGLEVGATGFDPKLNLGDAEAE 421

Query: 506  WEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQS 565
               L   L VP  DR+  +  A + G  +D++  L+ ID+WFL Q ++L+  E+ + T  
Sbjct: 422  -STLTRELTVPGADRIWYVADAFRAGKSIDDVFALTKIDRWFLVQIEDLVKEEEQVKTLG 480

Query: 566  VSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANT 625
            +S++ +D  Y++KR+GFSD ++A     TEK +R  R  L V+P YKRVDTCAAEF  +T
Sbjct: 481  LSSIDRDRMYKLKRKGFSDARLAKLLGVTEKNLRSHRHKLKVLPVYKRVDTCAAEFATDT 540

Query: 626  PYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNS 685
             YMYS+Y+ ECE+ P+ + K++ILGGGPNRIGQGIEFDYCC H + +++  GYETIM+N 
Sbjct: 541  AYMYSTYEEECEANPSGRDKIMILGGGPNRIGQGIEFDYCCVHAALAMREDGYETIMVNC 600

Query: 686  NPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEH 745
            NPETVSTDYDTSDRLYFEP+T+EDVL ++ +E+P+G+IVQ+GGQTPLK    I + L+E 
Sbjct: 601  NPETVSTDYDTSDRLYFEPVTLEDVLEIVRVEQPKGVIVQYGGQTPLK----ICRALEEA 656

Query: 746  RLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEI 805
             +P         I GTSPD+ID AEDRERF  +++ L++ QP+   A+SE +A+A +K I
Sbjct: 657  GVP---------IIGTSPDAIDRAEDRERFQQMVQRLNLRQPQNATARSEEEAIAASKAI 707

Query: 806  GYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALA 865
            GYP+VVRPSYVLGGRAMEIVY +E L  Y+  AV+V  + PVL+D +L+ AIE+DVDA+ 
Sbjct: 708  GYPLVVRPSYVLGGRAMEIVYDEEELKRYMREAVQVSNDSPVLLDHFLNCAIEVDVDAVC 767

Query: 866  DSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMN 925
            D    VVIGGIM+HIEQAGVHSGDSAC +P  ++     D I     K+A  L+V GLMN
Sbjct: 768  DG-EQVVIGGIMQHIEQAGVHSGDSACSLPAYSLPQHIQDEIREQVRKMALELDVIGLMN 826

Query: 926  CQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPK 985
             Q A+    D+Y+LE NPRASRTVPFVSK IG  LAK AA VM+GK+L ++GFTKE+IP 
Sbjct: 827  VQMAVQGE-DIYVLEVNPRASRTVPFVSKCIGESLAKVAARVMAGKTLAEVGFTKEIIPP 885

Query: 986  HVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVF 1045
              SVKEAV PF KF G D +LGPEM+STGEVMG+  SF  AFAKAQ+ A + LP SG  F
Sbjct: 886  FFSVKEAVFPFAKFPGVDTILGPEMKSTGEVMGVGDSFAEAFAKAQLGASEILPNSGCAF 945

Query: 1046 LSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVA 1105
            +S+ +  KP++E++A+  +D+GF++V+T+GTA  +E  G+ V +V K+ EGRPH  DM+ 
Sbjct: 946  ISVREDDKPYVEQVARDLVDLGFEVVATAGTARIIEAAGLPVRQVNKVTEGRPHVVDMIK 1005

Query: 1106 NGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTV 1162
            N ++ +++ T+ G      D   +RR  L +K+ + TT++G  A  EA++     TV
Sbjct: 1006 NDEVTLIINTTEGRQ-SIADSYSIRRNALQHKICITTTIAGGQAICEALKFGPEKTV 1061


>gi|345877966|ref|ZP_08829697.1| thioredoxin-2 [endosymbiont of Riftia pachyptila (vent Ph05)]
 gi|344225005|gb|EGV51377.1| thioredoxin-2 [endosymbiont of Riftia pachyptila (vent Ph05)]
          Length = 1069

 Score = 1282 bits (3318), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 642/1088 (59%), Positives = 813/1088 (74%), Gaps = 28/1088 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILI+GAGPIVIGQACEFDYSG QACKAL+EEG+ VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIKSILIIGAGPIVIGQACEFDYSGAQACKALREEGFRVILVNSNPATIMTDPEMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+T E+V +++EKE+PDALLPTMGGQTALN A+ L   G LEK+GVE+IGA  +A
Sbjct: 63   ATYIEPITWEVVARIIEKEQPDALLPTMGGQTALNCALDLVREGVLEKHGVEMIGASREA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDRDLF+QAM+ IG+  P SGI ++++E   +   IG +P IIRP+FT+GG+GGGI
Sbjct: 123  IDKAEDRDLFRQAMRKIGLDMPRSGIAHSMEEAHQVQASIG-YPAIIRPSFTMGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN EEF  IC+ GL  S TS++L+E+S+LGWKEYE+EV+RD  DN +IICSIEN+DPMG
Sbjct: 182  AYNPEEFIEICERGLDLSPTSELLIEESILGWKEYEMEVVRDRNDNCIIICSIENLDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGVE GGSNVQF++NP DG +++IEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQIMRNASLAVLREIGVETGGSNVQFSINPADGRMIIIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITK-KTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT   TPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGYTLDELQNDITGGATPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            FAFEKFP ++  LTTQMKSVGE MA+GR+FQES QKALR LE G  G  C  V   D + 
Sbjct: 362  FAFEKFPLADDRLTTQMKSVGEVMAIGRSFQESLQKALRGLETGKYGL-CEIV---DAEA 417

Query: 507  EQLKYSL----RVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLL 562
            E ++ +L    R+P P+R+  +  A + GM +DE+HE S +D WFL Q +EL+++E+ + 
Sbjct: 418  EDVRGTLVREMRLPGPERIWYLADAFRLGMDLDEVHEHSRVDPWFLVQIEELVNLEREVA 477

Query: 563  TQSVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFE 622
             Q +  +  D    +KR+GF+DK++A  T S+E E+RE+R   GV P +KRVDTCAAEF 
Sbjct: 478  GQGIEALDADRLRYLKRKGFADKRLAMLTGSSESEIRERRHQAGVRPVFKRVDTCAAEFA 537

Query: 623  ANTPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIM 682
             +T YMYS+Y+ ECE+ P+ ++K+++LGGGPNRIGQGIEFDYCC H +F+++  GYETIM
Sbjct: 538  TSTAYMYSTYEEECEAMPSDRQKIMVLGGGPNRIGQGIEFDYCCVHAAFAMREDGYETIM 597

Query: 683  MNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYL 742
            +N NPETVSTDYDTSDRLYFEPLT+EDVL VID E+P G+IVQ+GGQTPLKL+    Q L
Sbjct: 598  VNCNPETVSTDYDTSDRLYFEPLTLEDVLEVIDKEQPVGVIVQYGGQTPLKLA----QDL 653

Query: 743  DEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIA 802
            +    P         I GTSPDSID AEDRERF  ++++L ++QP    A     A+ +A
Sbjct: 654  EAAGAP---------IIGTSPDSIDLAEDRERFQKLVEKLDLKQPPNRTATEAEQAVQLA 704

Query: 803  KEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVD 862
            +EIGYP+VVRPSYVLGGRAMEIVY +E L  Y+  AV V  + PVL+D++L DAIE+D+D
Sbjct: 705  EEIGYPLVVRPSYVLGGRAMEIVYGEEDLRRYMREAVSVSNDSPVLLDRFLDDAIEVDID 764

Query: 863  ALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCG 922
            A+ D   +V+IG IMEHIEQAGVHSGDSAC +P  T+S S  D +     ++A  L V G
Sbjct: 765  AICDG-KDVLIGSIMEHIEQAGVHSGDSACSLPPYTLSPSVQDRMREQIRQMALELKVIG 823

Query: 923  LMNCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEV 982
            LMN Q+AI    ++YLLE NPRASRTVPFVSKA G PLAK AA  M+G SL + GFTKEV
Sbjct: 824  LMNTQFAIKDD-EIYLLEVNPRASRTVPFVSKATGVPLAKVAARCMAGTSLAEQGFTKEV 882

Query: 983  IPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSG 1042
            IP++  VKEAV PF KF G D +LGPEM+STGEVMG+  SF  A+ KA +  G  LP  G
Sbjct: 883  IPENYFVKEAVFPFVKFPGVDTVLGPEMKSTGEVMGVGKSFGEAYNKAILGGGSALPQGG 942

Query: 1043 TVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGD 1102
               +S+ D  K    R+AK   ++GF++ +T GTA  + +  I  ERV K+ EGRPH  D
Sbjct: 943  KALISVRDADKVRAVRVAKDLHELGFELCATGGTAKAINVADIPCERVNKVKEGRPHIVD 1002

Query: 1103 MVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTV 1162
            M+ N +I  +V T+ G +    D  ++RR  L +KV   TT+SGA A   A++ L  + V
Sbjct: 1003 MIKNREISFIVNTTEG-AKAIADSAEIRRAALQHKVSYTTTISGAEATCLALKQL--DAV 1059

Query: 1163 TMTALQDF 1170
            ++  LQD 
Sbjct: 1060 SVNRLQDL 1067


>gi|392375190|ref|YP_003207023.1| carbamoyl phosphate synthase, large subunit [Candidatus
            Methylomirabilis oxyfera]
 gi|258592883|emb|CBE69192.1| carbamoyl phosphate synthase, large subunit [Candidatus
            Methylomirabilis oxyfera]
          Length = 1099

 Score = 1282 bits (3317), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 645/1111 (58%), Positives = 825/1111 (74%), Gaps = 41/1111 (3%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD+ KILI+G+GPIVIGQACEFDYSGTQACKAL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIEKILIIGSGPIVIGQACEFDYSGTQACKALREEGYRVILVNSNPATIMTDPEIAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
            RTY+ P+T  +VEQ++ +ERPDALLPT+GGQT LNLAVALAE G L++YGVE+IGAKL A
Sbjct: 63   RTYVEPLTVSVVEQIIARERPDALLPTLGGQTGLNLAVALAEEGILDRYGVEMIGAKLQA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            IKKAEDRDLFKQAM+ IGV+ P SG   + +E  SI   IG +P IIRP+FTLGG GG I
Sbjct: 123  IKKAEDRDLFKQAMQKIGVEVPESGHAYSHEEARSIVERIG-YPAIIRPSFTLGGAGGSI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN++EF+   + GL+ S   QVL+E S++GWKE+ELEVMRDL DNVVIICSIEN DPMG
Sbjct: 182  AYNRDEFDEQVQWGLSMSPVHQVLIEASVIGWKEFELEVMRDLKDNVVIICSIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTL+DKEYQ +RD +IAIIREIGVE GGSN+QFAVNP +G+++ IEMN
Sbjct: 242  VHTGDSITVAPAQTLSDKEYQLMRDAAIAIIREIGVETGGSNIQFAVNPRNGQMLAIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRF 447
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD+I NDITK+T A FEP+IDY V K PRF
Sbjct: 302  PRVSRSSALASKATGFPIAKIAAKLAVGYTLDEISNDITKETTACFEPTIDYCVVKFPRF 361

Query: 448  AFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLEC---GF------------S 492
            +FEKF G++  LTTQMKSVGEAMA+GRTF+E+ QK +RSLE    G             +
Sbjct: 362  SFEKFAGADETLTTQMKSVGEAMAIGRTFKEALQKVIRSLETEAYGLESRIFRDLEQRGA 421

Query: 493  GWGCSNVKELDWDWEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFK 552
            G+G  + +  + D  +++  LRV N +R+  +  A++ GM V EIH L+ ID WF+   K
Sbjct: 422  GYGVRSSEVSETDQMRVRDRLRVANWERLFYLADALRMGMTVQEIHTLTAIDPWFIENIK 481

Query: 553  ELIDVEQFLL--------TQSVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLS 604
            E+++ E  L+        +  +  +T     + K  GFSD+++A    S E  +R+ R  
Sbjct: 482  EIVEFENRLIGLDGRRDGSPLLRLLTAPIIQQAKALGFSDRRLADLVGSQELTIRDARKR 541

Query: 605  LGVIPSYKRVDTCAAEFEANTPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDY 664
            +G+  ++K VDTC AEF A+TPY+YS+Y+ ECE+ PT +KK++ILG GPNRIGQGIEFDY
Sbjct: 542  MGIEATFKMVDTCGAEFAAHTPYLYSTYEQECEANPTNRKKIMILGSGPNRIGQGIEFDY 601

Query: 665  CCCHTSFSLQSAGYETIMMNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIV 724
            CC H + +L+  G ETIM+N NPETVSTDYDTSDRLYFEPL +EDVLN+ + ERP+G+IV
Sbjct: 602  CCVHAALALKEIGCETIMVNCNPETVSTDYDTSDRLYFEPLCLEDVLNIAERERPDGVIV 661

Query: 725  QFGGQTPLKLSLPIHQYLDEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSI 784
            QFGGQTPLKL++P+ +          +G   V+I GT PD+ID AEDRERF  +++ L +
Sbjct: 662  QFGGQTPLKLAIPLER----------AG---VKILGTPPDAIDRAEDRERFKQVLQRLDL 708

Query: 785  EQPKGGIAKSEADALAIAKEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPE 844
             QP  G A S ++AL IA++IGYPV+VRPSYVLGGRAMEIVY + +L  Y+  AV+   +
Sbjct: 709  NQPPNGTAVSVSEALRIARQIGYPVLVRPSYVLGGRAMEIVYNESSLQEYMARAVQASLD 768

Query: 845  RPVLIDKYLSDAIEIDVDALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCL 904
             PVL+DK+L DAIE+DVDAL D    VVIGGIMEHIE AGVHSGDSAC +P +++  S L
Sbjct: 769  HPVLVDKFLEDAIEMDVDALCDG-REVVIGGIMEHIEAAGVHSGDSACSLPPRSVPQSLL 827

Query: 905  DTISSWTIKLAKRLNVCGLMNCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYA 964
            D I + T  +A  L V GL+N Q+AI   G VY+LE NPRASRTVPFVSKA+G PLAK A
Sbjct: 828  DQIRAQTKAMALELGVIGLINIQFAI-KDGIVYVLEVNPRASRTVPFVSKAVGVPLAKLA 886

Query: 965  ALVMSGKSLNDLGFTKEVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFP 1024
            A VM+G SL +L FT+E   +HV+VKEAVLPF KF G D +LGPEM+STGEVMGID  F 
Sbjct: 887  AKVMAGMSLKELDFTEEPRLRHVAVKEAVLPFVKFPGVDAVLGPEMKSTGEVMGIDREFG 946

Query: 1025 IAFAKAQIAAGQKLPLSGTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKG 1084
            +AFAK+Q+ A   LPL GT FLS+    KPH+  +A+   ++GF++V+T+GTA  L+  G
Sbjct: 947  LAFAKSQVGASGALPLEGTAFLSVRGNDKPHIVLLARRLAEMGFQLVATAGTAAVLKDGG 1006

Query: 1085 IAVERVLKMHEG-RPHAGDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITT 1143
            + VE V K+ +G RPH  D + NG+I +++ T  G    ++D   +RR  +   +P  TT
Sbjct: 1007 VVVEPVAKVIDGVRPHIVDKMKNGEIGLVINTPEGHHA-RLDSYSIRRTAVTMSIPYFTT 1065

Query: 1144 VSGALANAEAIRSLKSNTVTMTALQDFFDVE 1174
            ++ A A  EAI++++   + + ALQ++  V+
Sbjct: 1066 MAAACAAVEAIQAMRHGKLRVQALQEYHQVQ 1096


>gi|376295725|ref|YP_005166955.1| carbamoyl-phosphate synthase large subunit [Desulfovibrio
            desulfuricans ND132]
 gi|323458286|gb|EGB14151.1| carbamoyl-phosphate synthase, large subunit [Desulfovibrio
            desulfuricans ND132]
          Length = 1077

 Score = 1282 bits (3317), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 639/1092 (58%), Positives = 812/1092 (74%), Gaps = 26/1092 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++KI+++G+GPIVIGQACEFDYSGTQA KALKEEGYEV+L+NSNPA+IMTDP LAD
Sbjct: 3    KRTDIKKIMLIGSGPIVIGQACEFDYSGTQALKALKEEGYEVVLVNSNPASIMTDPELAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+ PE V +++EKERPDALLPT+GGQT LN A+A+A+ G L+K+GVELIGA +D 
Sbjct: 63   ATYIEPIEPETVARIIEKERPDALLPTLGGQTGLNTALAVADMGVLDKFGVELIGANIDV 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAE R+ F++AM+ IG+  P SGI + +D+      +I  FP+I+RPA+TLGG+GGG+
Sbjct: 123  INKAESREEFREAMRNIGLHMPESGICHNMDDVREWGEKI-PFPIIVRPAYTLGGSGGGV 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN EE E IC  GLA S+  ++++E+S+LGWKEYELEVMRD  DN VIICSIEN+DPMG
Sbjct: 182  AYNMEELEQICANGLALSMKHEIMLERSILGWKEYELEVMRDKKDNCVIICSIENLDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDS+TVAPAQTLTD EYQRLRD S+A++REIGVE GGSNVQFAVNP DGE+++IEMN
Sbjct: 242  VHTGDSVTVAPAQTLTDDEYQRLRDASLAVMREIGVETGGSNVQFAVNPEDGELIIIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRF 447
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD+IPNDIT++T ASFEP+IDY V KIPRF
Sbjct: 302  PRVSRSSALASKATGFPIAKIAAKLAVGYTLDEIPNDITRETMASFEPAIDYCVVKIPRF 361

Query: 448  AFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDWE 507
             FEKFPG+E  LTT MKSVGE MA+GRTF+E+ QK LRSLE G  G G       D+D  
Sbjct: 362  TFEKFPGTEDYLTTAMKSVGETMAIGRTFKEALQKGLRSLETGHPGLG-KRFDTCDFDKN 420

Query: 508  QLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLL----T 563
            ++   LR PN  R+ A+  A+  GM  +E+HE + ID WFL Q K++ID+E  L+     
Sbjct: 421  EILKLLRRPNSQRIYALRNALLCGMSEEEVHEATKIDPWFLRQIKDIIDLEHALIDFGKR 480

Query: 564  QSVSNMTK---DDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAE 620
            + VS   +   D   + K  G+SD Q+A   +++E  VR  R  LG+ P+Y  VDTCAAE
Sbjct: 481  EGVSKEAEGMADMLRKAKEYGYSDPQLAAMWRTSEDAVRSLRKELGIEPTYYLVDTCAAE 540

Query: 621  FEANTPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYET 680
            FEA TPY YS+Y+   E+    +KK++ILGGGPNRIGQGIEFDYCCCH+SF+L+  G E+
Sbjct: 541  FEAYTPYYYSTYETGQENVREDRKKIVILGGGPNRIGQGIEFDYCCCHSSFTLKELGVES 600

Query: 681  IMMNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQ 740
            IM+NSNPETVSTDYDTSD+LYFEPLT EDV+N+I+ E+P+G+IVQFGGQTPL L+L    
Sbjct: 601  IMVNSNPETVSTDYDTSDKLYFEPLTFEDVMNIIEFEKPDGVIVQFGGQTPLNLAL---- 656

Query: 741  YLDEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALA 800
                 RL +A     V + GTSPD+ID AEDRERF   + +L++ QP  G A S  +A  
Sbjct: 657  -----RLMNAG----VPLIGTSPDAIDRAEDRERFKQFLNKLNLRQPPNGTAMSMVEARE 707

Query: 801  IAKEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEID 860
            IA+++ +P+V+RPSYVLGGR M+IVY+ +    Y  ++  V PE P LIDK+L +A+E+D
Sbjct: 708  IAEKLTFPLVLRPSYVLGGRGMDIVYSMDEFDHYFRHSALVSPEHPTLIDKFLENAVEVD 767

Query: 861  VDALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNV 920
            VDALAD   +V IGG+MEHIE+AG+HSGDSA ++P  ++SS  +  I   T+ +AK L V
Sbjct: 768  VDALADG-EDVYIGGVMEHIEEAGIHSGDSASVLPPYSLSSELIREIERQTVAMAKELGV 826

Query: 921  CGLMNCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTK 980
             GLMN Q+AI  + +VY++E NPRASRTVPFVSKA G PLAK A  VM G+ L DL    
Sbjct: 827  VGLMNVQFAIKDN-EVYIIEVNPRASRTVPFVSKATGVPLAKLATRVMLGEKLKDLHPWS 885

Query: 981  EVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPL 1040
                 HVSVKE+V PF +F   DVLLGPEMRSTGEVMGID SF +A+ K+Q+AAGQKLP 
Sbjct: 886  MRKKGHVSVKESVFPFNRFPNVDVLLGPEMRSTGEVMGIDPSFGLAYMKSQLAAGQKLPT 945

Query: 1041 SGTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEG-RPH 1099
            SGTVF+S+ND  K  +  +AK F  +GFK+ +T GTA FL  KG+ VE+V K+HEG RPH
Sbjct: 946  SGTVFMSVNDWDKSKIVLVAKDFEAMGFKVAATGGTADFLMEKGVNVEKVHKVHEGQRPH 1005

Query: 1100 AGDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKS 1159
              D + NG   +++ T SG      D   +R+  L Y +P  TTVSGA A  +AI  L+ 
Sbjct: 1006 VVDHIKNGAFDLVINTPSGKKTVG-DAKMIRQNALLYNIPYTTTVSGARAVVQAICELRQ 1064

Query: 1160 NTVTMTALQDFF 1171
              + + +LQ+++
Sbjct: 1065 TGLQVKSLQEYY 1076


>gi|108763738|ref|YP_631585.1| carbamoyl phosphate synthase large subunit [Myxococcus xanthus DK
            1622]
 gi|122981062|sp|Q1D6Y8.1|CARB_MYXXD RecName: Full=Carbamoyl-phosphate synthase large chain; AltName:
            Full=Carbamoyl-phosphate synthetase ammonia chain
 gi|108467618|gb|ABF92803.1| carbamoyl-phosphate synthase, large subunit [Myxococcus xanthus DK
            1622]
          Length = 1083

 Score = 1282 bits (3317), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 632/1091 (57%), Positives = 807/1091 (73%), Gaps = 18/1091 (1%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD+RK+L++G+GPIVIGQA EFDYSGTQA KAL++EG EV+L+NSNPAT+MTDP  A 
Sbjct: 3    KRTDIRKVLVIGSGPIVIGQAVEFDYSGTQAIKALRDEGVEVVLLNSNPATVMTDPEFAH 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
            RTYI P+T E  E++L  ERPD+LLPTMGGQTALNLA ALAE G LEKYGV LIGA LDA
Sbjct: 63   RTYIEPITVEAAERILASERPDSLLPTMGGQTALNLAKALAEQGILEKYGVRLIGASLDA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR LFK AM+ IGV  P SG   TLD+ +S+  +IG FP IIRP+FTLGGTGGGI
Sbjct: 123  INKAEDRQLFKAAMQKIGVALPKSGYATTLDQAMSLVEDIG-FPAIIRPSFTLGGTGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEFE IC++GL AS T+ +LVE+S+LGWKEYELEV+RD ADNV+I+CSIEN+DPMG
Sbjct: 182  AYNREEFETICRSGLKASPTTTILVEESVLGWKEYELEVVRDTADNVIIVCSIENLDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTD+EYQR+R  S+AIIREIGVE GGSN+QF +NP DG ++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDREYQRMRQASLAIIREIGVETGGSNIQFGINPKDGRMVVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRF 447
            PRVSRSSALASKATG+PIAK+AAKL++GY+LD++ NDIT+ TPASFEP++DYVV K+PRF
Sbjct: 302  PRVSRSSALASKATGYPIAKIAAKLALGYTLDELRNDITRDTPASFEPTLDYVVVKVPRF 361

Query: 448  AFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDWE 507
             FEKFP ++  LTT M+SVGE MA+GRTF E++ KALRS+E G  G     +     + E
Sbjct: 362  NFEKFPHADRTLTTSMRSVGEVMAIGRTFPEAYMKALRSMELGRVGLESPELPAEKEERE 421

Query: 508  Q-LKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
            + L+ +LR+P P+R   +  A ++GM V+++H LS ID WFL   + L++  Q L     
Sbjct: 422  KVLREALRIPRPERPWFVAQAFREGMTVEDVHALSAIDPWFLRYIQMLVNEAQSLQEYGR 481

Query: 567  SNMTKDD-FYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANT 625
             +   D+   + K  GFSDK +        +EVR  R +  + P YKRVDTCAAEFEA T
Sbjct: 482  LDQLPDEVLRQAKAHGFSDKYLGRLLGYPAEEVRAHRHARNIRPVYKRVDTCAAEFEAYT 541

Query: 626  PYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNS 685
            PY+YS+Y+ E E+ PT ++KVLILG GP RIGQGIEFDY C H +F+L+ AGYET+M+N 
Sbjct: 542  PYLYSTYEEEDEAPPTDRQKVLILGSGPIRIGQGIEFDYACVHAAFALREAGYETVMVNC 601

Query: 686  NPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEH 745
            NPETVSTDYDTSDRLYFEPLT+EDVL V   E+P G IVQFGGQTPL++S+P    L++ 
Sbjct: 602  NPETVSTDYDTSDRLYFEPLTIEDVLEVSQREKPVGAIVQFGGQTPLRISVP----LEKA 657

Query: 746  RLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEI 805
             LP         I GTSPD+ID AEDRERF A+I++L ++QP+ G+A+S A+A  +A+ I
Sbjct: 658  GLP---------ILGTSPDAIDRAEDRERFAALIEKLGLKQPENGVARSHAEAFKVAERI 708

Query: 806  GYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALA 865
            GYPV+VRPSYVLGGRAME VY   +L  Y+  AV   PE PVLID++L +AIE+D+D +A
Sbjct: 709  GYPVMVRPSYVLGGRAMETVYDVASLERYMREAVSASPEHPVLIDRFLKEAIEVDLDLVA 768

Query: 866  DSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMN 925
            D  G V+IGG++EHI++AGVHSGD+A  +P  ++S   ++ +    I LA+ L V GLMN
Sbjct: 769  DRTGAVMIGGVLEHIQEAGVHSGDAAATLPPHSLSPDLVERMKDQAIALARELGVVGLMN 828

Query: 926  CQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPK 985
             Q+AI     +Y+LE NPRASRTVPF+SKA G  +AK AAL M GK+L +LG T+E   K
Sbjct: 829  VQFAI-QGKTIYILEVNPRASRTVPFISKATGVAMAKIAALCMVGKTLKELGVTQEPEFK 887

Query: 986  HVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVF 1045
            HV+VKE+V PF +F G DV+LGPEM+STGEVMG+   +  AFAK+Q+AAG KLP SG VF
Sbjct: 888  HVAVKESVFPFARFAGVDVILGPEMKSTGEVMGLANDYASAFAKSQLAAGVKLPKSGKVF 947

Query: 1046 LSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVA 1105
            +S+ D  KP +  +A+    +GF +V TSGT  +L  KGI  + V K+ EGRP+  D + 
Sbjct: 948  ISVKDDDKPAVVDLARRLRSMGFSLVVTSGTHTYLATKGIEAQVVQKVTEGRPNIVDKIV 1007

Query: 1106 NGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTVTMT 1165
            +G+I +++ T+ G   +  D   +RR  L + VP  TTV  A     A+ SLK   + + 
Sbjct: 1008 DGEIVLVINTTFGKQ-EIADSFSIRRESLMHSVPYYTTVQAARMAVGALESLKCTELEVK 1066

Query: 1166 ALQDFFDVETA 1176
             LQ++  +  A
Sbjct: 1067 PLQEYLGINAA 1077


>gi|357632761|ref|ZP_09130639.1| carbamoyl-phosphate synthase, large subunit [Desulfovibrio sp.
            FW1012B]
 gi|357581315|gb|EHJ46648.1| carbamoyl-phosphate synthase, large subunit [Desulfovibrio sp.
            FW1012B]
          Length = 1078

 Score = 1281 bits (3316), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 645/1091 (59%), Positives = 813/1091 (74%), Gaps = 25/1091 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++KI+I+G+GPIVIGQACEFDYSG+QA KALKEEGYEV+L+NSNPATIMTDPGLAD
Sbjct: 3    KRTDIKKIMIIGSGPIVIGQACEFDYSGSQAAKALKEEGYEVVLVNSNPATIMTDPGLAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
            RTYI P+ P  V +++ +E+PDA+LPT+GGQT LN AVALAESG L  +GVELIGA LD 
Sbjct: 63   RTYIEPIEPGTVARIIAREKPDAILPTLGGQTGLNTAVALAESGVLAAHGVELIGASLDV 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            IKKAE RDLF++AM+ IG+K P SGI +T+D+      +I  FP+I+RPAFTLGGTGGG+
Sbjct: 123  IKKAESRDLFRKAMENIGLKVPKSGICHTMDDVREWGRKIA-FPIIVRPAFTLGGTGGGV 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN E+ E I   GLAAS+ S++++E+S+LGWKE+ELEVMRD ADN VIICSIEN+DPMG
Sbjct: 182  AYNMEDLEKISSVGLAASMKSEIMLEQSVLGWKEFELEVMRDRADNCVIICSIENIDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDS TVAP QTLTD EYQ++R+ SIAI+REIGVE GGSNVQFAVNP DGE+++IEMN
Sbjct: 242  VHTGDSATVAPIQTLTDDEYQKMRNASIAIMREIGVETGGSNVQFAVNPADGEMVIIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRF 447
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD+IPNDIT++T ASFEP+IDY V KIPRF
Sbjct: 302  PRVSRSSALASKATGFPIAKIAAKLAVGYTLDEIPNDITRETMASFEPTIDYCVVKIPRF 361

Query: 448  AFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDWE 507
             FEKFPGSE  LTT MKSVGEAM++GR F+E+ QK LRSLE G SG G  + +  D D E
Sbjct: 362  TFEKFPGSEDYLTTAMKSVGEAMSIGRNFKEALQKGLRSLEIGVSGLG-PDTEACDPDRE 420

Query: 508  QLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQ----FLLT 563
            QL   +R PN  R+  I  AM+ G+ ++E+ + +++D WFL Q KE++D+E     F   
Sbjct: 421  QLLADMRKPNSKRLFQIRQAMRCGVSLEELFDATWVDPWFLRQIKEIVDMETELAAFPKE 480

Query: 564  QSVSNMTK--DDFYEVKRRGFSDKQIAFATK-STEKEVREKRLSLGVIPSYKRVDTCAAE 620
            Q  +   K  +     K+ GFSD QIA   +  +  + R+ R  +G+ P+Y  VDTCA E
Sbjct: 481  QVAAGNAKCRELLIAAKKNGFSDPQIAALFRLPSHLDARKLRQDMGINPTYYLVDTCAGE 540

Query: 621  FEANTPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYET 680
            FEA TPY YS+Y+   E AP   +KV+ILGGGPNRIGQGIEFDYCCCH S++L+  G E+
Sbjct: 541  FEAYTPYYYSTYETGREVAPKPARKVVILGGGPNRIGQGIEFDYCCCHASYALREMGVES 600

Query: 681  IMMNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQ 740
            IM+NSNPETVSTDYDTSDRLYFEPLT EDVLN+++ E+PEG+IVQFGGQTPL L++P+ +
Sbjct: 601  IMVNSNPETVSTDYDTSDRLYFEPLTFEDVLNILESEKPEGVIVQFGGQTPLNLAVPLLK 660

Query: 741  YLDEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALA 800
                           VRI GTSPDSID AEDRERF A++ +L + QP  G A +  +A  
Sbjct: 661  -------------AGVRILGTSPDSIDRAEDRERFQAMLHKLGLRQPANGTAFAVEEACE 707

Query: 801  IAKEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEID 860
            IA +IGYPVVVRPSYVLGGRAMEIVY  + L  Y + AV    + P+L+DK+L +AIE+D
Sbjct: 708  IADKIGYPVVVRPSYVLGGRAMEIVYDRKDLENYFKYAVVASGKHPILVDKFLVNAIEVD 767

Query: 861  VDALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNV 920
            VDA++D   +  + G+MEHIE+AG+HSGDSAC++P  ++S   +  I   T+ LA+ L V
Sbjct: 768  VDAVSDGT-DTYVAGVMEHIEEAGIHSGDSACVLPPHSLSPELIREIERQTVALAEELGV 826

Query: 921  CGLMNCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTK 980
             GLMN Q+A+   GD+Y+LE NPRASRT PFVSKA G PLAK A  V+ GK L DL    
Sbjct: 827  IGLMNIQFAV-KDGDIYILEVNPRASRTSPFVSKATGVPLAKLATNVIMGKKLKDLNPWA 885

Query: 981  EVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPL 1040
            E    + +VKE+V PF +F G DVLLGPEMRSTGEVMGID S  +AF K+Q+ AGQ LPL
Sbjct: 886  ERKSGYYAVKESVFPFNRFPGVDVLLGPEMRSTGEVMGIDASVGLAFMKSQLGAGQNLPL 945

Query: 1041 SGTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHA 1100
            SGTVF+S+ D  K  +   A+   ++GF+I++T GTA +LE KGIAV  V+K+ EGRPH 
Sbjct: 946  SGTVFISVADGAKDDVLPAAQILSEVGFRIMATKGTAAYLEGKGIAVTTVMKVFEGRPHV 1005

Query: 1101 GDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSN 1160
             D + N +I  +VI   GD     D + LR+  L Y +P  TT +GA A A+AIR +   
Sbjct: 1006 VDHMKNREID-LVINLVGDKRTVRDSMALRQTALLYGIPYTTTAAGAKAMAQAIREMGGK 1064

Query: 1161 TVTMTALQDFF 1171
             +T+ +LQ+++
Sbjct: 1065 GLTVKSLQEYY 1075


>gi|408421746|ref|YP_006763160.1| carbamoyl-phosphate synthase subunit CarB [Desulfobacula toluolica
            Tol2]
 gi|405108959|emb|CCK82456.1| CarB2: carbamoyl-phosphate synthase, large chain [Desulfobacula
            toluolica Tol2]
          Length = 1076

 Score = 1281 bits (3316), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 637/1085 (58%), Positives = 816/1085 (75%), Gaps = 20/1085 (1%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KR D++KILI+GAGPI+I QACEFDYSGTQACKALKEEGYEVILINSNPATIMTDP  AD
Sbjct: 3    KREDIKKILIIGAGPIIISQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPETAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
            R YI P+TPE V +V+EKERPDALLPT+GGQT LN A+  A++G LEKY VE+IGA  DA
Sbjct: 63   RVYIEPVTPETVAKVIEKERPDALLPTLGGQTGLNTAIEAAKAGVLEKYNVEMIGASEDA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR+LF+ AM  IG++ P SG    + E  +++  IG FP+I+RP+FTLGGTGGG+
Sbjct: 123  INKAEDRELFRDAMNKIGLRIPKSGFATNMHEVETVSRRIG-FPIIVRPSFTLGGTGGGV 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN EE  ++ K+GL ASL +QV++E+S+LGWKEYELEVMRD ADNVVIICSIENVD MG
Sbjct: 182  AYNMEEVLSLSKSGLDASLITQVMLEESVLGWKEYELEVMRDHADNVVIICSIENVDAMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTL+DKEYQ+LRD SIAIIREIGV+ GGSNVQFAVNP +G+++V+EMN
Sbjct: 242  VHTGDSITVAPAQTLSDKEYQKLRDASIAIIREIGVDTGGSNVQFAVNPENGDIIVVEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRF 447
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD+I NDIT +T A FEPSIDY V KIPR+
Sbjct: 302  PRVSRSSALASKATGFPIAKIAAKLAVGYTLDEITNDITGETLACFEPSIDYCVVKIPRW 361

Query: 448  AFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWD-- 505
             FEKFP +E +LTT MKSVGE MA+GRTF+E+ QK +RSLE G +G+G      L     
Sbjct: 362  TFEKFPETEDVLTTAMKSVGETMAIGRTFKEALQKGIRSLEIGRAGFGGDGKDPLPGSVA 421

Query: 506  WEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQS 565
              +L+Y L  PN  R+  +  A++  M +  I+E++ ID WFL Q K+++D+E+ +L   
Sbjct: 422  GNELEYKLSTPNSQRLFYLKYAIEHDMPITMIYEMTGIDPWFLNQMKQIVDLEKQILLAG 481

Query: 566  VSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANT 625
              ++ +D F + K+ GFSD Q+A+ TK T+K++ + R  LG++P YK VDTCAAEF A T
Sbjct: 482  -KDLPRDLFEKAKKYGFSDVQLAYLTKLTDKQIEQTRKDLGIVPVYKLVDTCAAEFRAAT 540

Query: 626  PYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNS 685
            PY YS+Y+ ECE+  + +KKV+ILGGGPNRIGQGIEFDYCC H SF+L+  G E+IM+NS
Sbjct: 541  PYYYSTYETECEARVSDRKKVIILGGGPNRIGQGIEFDYCCVHASFALREEGVESIMVNS 600

Query: 686  NPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEH 745
            NPETVSTDYDTSD+LYFEPLT EDVL++++ E+P G+IVQFGGQTPL L+  + +     
Sbjct: 601  NPETVSTDYDTSDKLYFEPLTREDVLHIVEKEKPYGVIVQFGGQTPLNLASDLQK----- 655

Query: 746  RLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEI 805
                      V I GTSPDSID AEDR+ F  ++ +L + QP+ GIA S  DA  +A++I
Sbjct: 656  --------AGVPIIGTSPDSIDRAEDRDLFQEMLNKLGLRQPENGIAFSYEDAQRVARDI 707

Query: 806  GYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALA 865
            GYPV+VRPS+VLGGRAM+IVY +  L  Y + AV+  P++PVLIDK+L +A E+DVD ++
Sbjct: 708  GYPVMVRPSFVLGGRAMKIVYDESDLEEYFDLAVQASPDKPVLIDKFLEEAFELDVDVIS 767

Query: 866  DSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMN 925
            D     VIGG+MEHIE+AG+HSGDSAC++P  +IS + +D ++     +AK LNV GLMN
Sbjct: 768  DG-EKTVIGGMMEHIEEAGIHSGDSACVLPPYSISQTHIDEMADAARAIAKELNVRGLMN 826

Query: 926  CQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPK 985
             Q+ I     VY++E NPRASRT+PFVSKAIG PLAK A  VM GK+L++LG TKEVIP 
Sbjct: 827  IQFGIMND-TVYIIEVNPRASRTIPFVSKAIGVPLAKLATKVMLGKTLDELGITKEVIPH 885

Query: 986  HVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVF 1045
            +  VKEAV+PF++F   D +LGPEM+STGEVMGID     A AKAQ+AAGQKLP  GTVF
Sbjct: 886  YYCVKEAVMPFDRFDNVDPVLGPEMKSTGEVMGIDKDLGAAVAKAQLAAGQKLPTEGTVF 945

Query: 1046 LSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVA 1105
            +S+ D  K     +A++F ++GF I++T GT+ FLE   +  + + K+  GRPH  D V 
Sbjct: 946  ISVQDKDKAAALPVARSFHEMGFTIMATRGTSSFLEENNVPAKLIKKVSAGRPHVVDAVK 1005

Query: 1106 NGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTVTMT 1165
            N +IQ+++ T +     Q DG ++RR  + YK+P  TT  G  A   AI +LK   +++ 
Sbjct: 1006 NNEIQLILNTGASSQTKQ-DGYEIRRAAIKYKIPYATTTDGTKAICSAIEALKKEGLSVK 1064

Query: 1166 ALQDF 1170
             +QD+
Sbjct: 1065 PIQDY 1069


>gi|347733336|ref|ZP_08866397.1| carbamoyl-phosphate synthase, large subunit [Desulfovibrio sp. A2]
 gi|347517933|gb|EGY25117.1| carbamoyl-phosphate synthase, large subunit [Desulfovibrio sp. A2]
          Length = 1078

 Score = 1281 bits (3316), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 642/1091 (58%), Positives = 804/1091 (73%), Gaps = 25/1091 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTDL++I+++G+GPIVIGQACEFDYSGTQA KALKEEGYEV+L+NSNPATIMTDPGLAD
Sbjct: 3    KRTDLKRIMVIGSGPIVIGQACEFDYSGTQAVKALKEEGYEVVLVNSNPATIMTDPGLAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
            RTYI P+ PE V  ++ KERPDALLPT+GGQT LN A+ALA  G LE+ GVELIGA    
Sbjct: 63   RTYIEPIEPETVAAIIRKERPDALLPTLGGQTGLNTALALAAMGVLEECGVELIGANKQV 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I+KAE R+LF++AM  IG+K P SGI  T+++   +  E+  FPLIIRPAFT+GGTGGGI
Sbjct: 123  IEKAESRELFREAMANIGLKVPASGIARTMEDVRRLGAEM-PFPLIIRPAFTMGGTGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN E+ E I   GLAAS+  +V++E+S+LGWKE+E+EVMRD ADN VIICSIEN D MG
Sbjct: 182  AYNMEDLEEIAARGLAASIKHEVMIEQSVLGWKEFEMEVMRDKADNCVIICSIENFDAMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTD EYQ +RD SIAI+REIGVE GGSNVQF +NP++G+++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDVEYQMMRDASIAIMREIGVETGGSNVQFGINPLNGDMVVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRF 447
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD+IPNDIT++T ASFEPSIDY VTKIPRF
Sbjct: 302  PRVSRSSALASKATGFPIAKIAAKLAVGYTLDEIPNDITRETMASFEPSIDYCVTKIPRF 361

Query: 448  AFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDWE 507
             FEKFPG++  LTT MKSVGEAM++GRTF+ES QK LRSLE G  G G S  +    + E
Sbjct: 362  TFEKFPGAKDELTTSMKSVGEAMSIGRTFKESLQKGLRSLEVGAPGLG-SAFRCKGPERE 420

Query: 508  QLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSVS 567
             +   LR PN  R+  +  AM  GM V+EIHE + ID WFL Q K+LID+E  L   ++ 
Sbjct: 421  DIMRKLRTPNSRRIFYVRHAMLDGMTVEEIHEATAIDPWFLRQMKDLIDMEAELRDFALG 480

Query: 568  N-MTKDD------FYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAE 620
            N MT D+          K  GFSD+Q+A   K  E +VR  R ++G++P+Y  VDTCA+E
Sbjct: 481  NAMTVDNAELVALMRRAKEYGFSDRQLAEMWKRPESDVRTLRKAMGIVPTYYLVDTCASE 540

Query: 621  FEANTPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYET 680
            FEA TPY YS+Y+   E     +KKV+ILGGGPNRIGQGIEFDYCCCH SF+L+  G + 
Sbjct: 541  FEAYTPYYYSTYETGHEVTVDDRKKVIILGGGPNRIGQGIEFDYCCCHASFALKEMGVQA 600

Query: 681  IMMNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQ 740
            IM+NSNPETVSTDYDTSDRLYFEPLT EDV+N+I+ ERP+G+IVQFGGQTPL L++P+ +
Sbjct: 601  IMVNSNPETVSTDYDTSDRLYFEPLTYEDVMNIIEAERPDGVIVQFGGQTPLNLAVPLMR 660

Query: 741  YLDEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALA 800
                           V I GTSPDSID AEDRERF A++++L + QP      S  +A +
Sbjct: 661  -------------AGVPILGTSPDSIDRAEDRERFQALLQKLGLRQPANATVMSLPEARS 707

Query: 801  IAKEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEID 860
             A  IGYP VVRPSYVLGGRAMEIVY +E L  Y  N+V   P+ P+LIDK+L  AIE+D
Sbjct: 708  AAARIGYPTVVRPSYVLGGRAMEIVYDEEQLAEYFANSVGEKPKHPILIDKFLESAIEVD 767

Query: 861  VDALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNV 920
            VDAL+D   +V + GIMEHIE+AG+HSGDSAC+IP  T+  + ++ I+  T++LA+ L V
Sbjct: 768  VDALSDGT-DVYVAGIMEHIEEAGIHSGDSACVIPPHTLPEAIVNEIARQTVELARELRV 826

Query: 921  CGLMNCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTK 980
             GLMN Q+A+   G +Y+LE NPRASRT PFVSKA   PL + A  +M G +L +L    
Sbjct: 827  VGLMNIQFAV-KDGLIYILEVNPRASRTAPFVSKATAVPLPRLATQIMLGATLKELDPWS 885

Query: 981  EVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPL 1040
                 + SVKE+V PF +F G D+LLGPEMRSTGEVMGI  SF  A+ K Q+A GQ+LP 
Sbjct: 886  MRRTGYFSVKESVFPFNRFPGVDILLGPEMRSTGEVMGIASSFEEAYLKGQLAGGQRLPE 945

Query: 1041 SGTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHA 1100
            SG +F+S+ND  K  +  +A  F D+GF++++TSGTA  L   G+    V K++EGRP+ 
Sbjct: 946  SGKIFISVNDRDKLLITEVASMFADLGFEVLATSGTAKLLREGGVPATSVHKVYEGRPNI 1005

Query: 1101 GDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSN 1160
             D + NG I +++ T+SG    Q D   +R+  L Y VP  TTVSGA A A+AIR+ +  
Sbjct: 1006 VDFIKNGDIALVLNTASGKRTVQ-DSKSIRQATLMYGVPYSTTVSGAKAIAQAIRASRCC 1064

Query: 1161 TVTMTALQDFF 1171
             V + +LQ+++
Sbjct: 1065 GVNVKSLQEYY 1075


>gi|442321499|ref|YP_007361520.1| carbamoyl phosphate synthase large subunit [Myxococcus stipitatus DSM
            14675]
 gi|441489141|gb|AGC45836.1| carbamoyl phosphate synthase large subunit [Myxococcus stipitatus DSM
            14675]
          Length = 1084

 Score = 1281 bits (3316), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 631/1088 (57%), Positives = 811/1088 (74%), Gaps = 18/1088 (1%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD+RK+L++G+GPIVIGQA EFDYSGTQA KAL++EG EV+L+NSNPAT+MTDP  A 
Sbjct: 3    KRTDIRKVLVIGSGPIVIGQAVEFDYSGTQAIKALRDEGVEVVLLNSNPATVMTDPEFAF 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
            RTYI P+T +  E+++  E+PD+LLPTMGGQTALNLA ALAE G LEK+GV LIGA L+A
Sbjct: 63   RTYIEPITVDAAERIIAAEKPDSLLPTMGGQTALNLAKALAEQGILEKHGVRLIGASLEA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR LFK AM+ IGV  P SG  NTLD+ +S+ +EIG FP IIRP+FTLGGTGGGI
Sbjct: 123  INKAEDRQLFKAAMQKIGVTLPKSGYANTLDQAMSLVDEIG-FPAIIRPSFTLGGTGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEFEAIC++GL AS TS +LVE+S+LGWKEYELEV+RD ADNV+I+CSIEN+DPMG
Sbjct: 182  AYNREEFEAICRSGLKASPTSTILVEESVLGWKEYELEVVRDTADNVIIVCSIENLDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTD+EYQR+R  S+AIIREIGV+ GGSN+QF +NP DG ++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDREYQRMRQASLAIIREIGVDTGGSNIQFGINPKDGRMVVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRF 447
            PRVSRSSALASKATG+PIAK+AAKL++GY+LD++ NDIT+ TPASFEP++DYVV K+PRF
Sbjct: 302  PRVSRSSALASKATGYPIAKIAAKLALGYTLDELRNDITRDTPASFEPTLDYVVVKVPRF 361

Query: 448  AFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDWE 507
             FEKFP ++  LTT M+SVGE MA+GRTF E++ KALRS+E G  G    ++     + E
Sbjct: 362  NFEKFPHADRTLTTSMRSVGEVMAIGRTFPEAYMKALRSMELGRVGLESPDLPAEKEERE 421

Query: 508  Q-LKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
            + L+ +LRVP P+R   +  A ++GM V+++H LS ID WFL   + L+   Q +     
Sbjct: 422  KVLREALRVPRPERPWFVAQAFREGMTVEDVHALSAIDPWFLRYIEMLVREAQSIQEYGR 481

Query: 567  SNMTKDD-FYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANT 625
             +   DD   + K  GFSDK +       E+EVR  R S  + P +KRVDTCAAEFEA T
Sbjct: 482  LDQLPDDVLRQAKAHGFSDKYLGKLLGYPEEEVRAHRHSRKIRPVFKRVDTCAAEFEAFT 541

Query: 626  PYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNS 685
            PY+YS+Y+ E ES PT ++KVLILG GP RIGQGIEFDY C H +F+L+ AGYET+M+N 
Sbjct: 542  PYLYSTYEEEDESPPTDRQKVLILGSGPIRIGQGIEFDYACVHAAFALREAGYETVMVNC 601

Query: 686  NPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEH 745
            NPETVSTDYDTSDRLYFEPLT+EDVL V   ERP G IVQFGGQTPL++S+P    L++ 
Sbjct: 602  NPETVSTDYDTSDRLYFEPLTIEDVLEVSQRERPIGAIVQFGGQTPLRISVP----LEKA 657

Query: 746  RLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEI 805
             LP         I GTSPD+ID AEDRERF+ +I++L ++QP+ G+A+S A+A  +A+ I
Sbjct: 658  GLP---------ILGTSPDAIDRAEDRERFSTLIEKLGLKQPENGVARSHAEAFKVAERI 708

Query: 806  GYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALA 865
            GYPV+VRPSYVLGGRAME VY   +L  Y+  AV   PE PVLID++L +AIE+D+D +A
Sbjct: 709  GYPVMVRPSYVLGGRAMETVYDAASLERYMREAVSASPEHPVLIDRFLKEAIEVDLDLVA 768

Query: 866  DSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMN 925
            D  G+V+IGG++EHI++AGVHSGD+A  +P  ++S   ++ +    I LA+ L V GLMN
Sbjct: 769  DRTGDVMIGGVLEHIQEAGVHSGDAAATLPPHSLSPDLVERMKDQAIALARELGVVGLMN 828

Query: 926  CQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPK 985
             Q+AI     +Y+LE NPRASRTVPF+SKA G  +AK AAL M GK+L +LG TKE   +
Sbjct: 829  VQFAI-QGKVIYILEVNPRASRTVPFISKATGVAMAKIAALCMVGKTLKELGATKEPEMR 887

Query: 986  HVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVF 1045
            HV+VKE+V PF +F G DV+LGPEM+STGEVMG+   +  AFAK+Q+AAG KLP SG VF
Sbjct: 888  HVAVKESVFPFARFAGVDVILGPEMKSTGEVMGLAQDYASAFAKSQLAAGVKLPKSGKVF 947

Query: 1046 LSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVA 1105
            +S+ D  KP +  +AK    +GF ++ T+GT  +L  KGI  + V K+ EGRP+  D + 
Sbjct: 948  ISVKDDDKPAVVDLAKRLRTMGFTLIVTAGTHKYLATKGIEAQVVQKVKEGRPNIVDKIV 1007

Query: 1106 NGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTVTMT 1165
            +G+I +++ T+ G   +  D   +RR  L + VP  TTV  A     A+ +LK   + + 
Sbjct: 1008 DGEIVLVINTTFGKQ-EIADSFSIRREALMHSVPYYTTVQAARMAVGALEALKRTELEVK 1066

Query: 1166 ALQDFFDV 1173
             LQ++  V
Sbjct: 1067 PLQEYLGV 1074


>gi|409396351|ref|ZP_11247354.1| carbamoyl phosphate synthase large subunit [Pseudomonas sp. Chol1]
 gi|409119128|gb|EKM95515.1| carbamoyl phosphate synthase large subunit [Pseudomonas sp. Chol1]
          Length = 1073

 Score = 1281 bits (3314), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 632/1085 (58%), Positives = 813/1085 (74%), Gaps = 22/1085 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILILGAGPIVIGQACEFDYSG QACKALKEEG+ VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIKSILILGAGPIVIGQACEFDYSGAQACKALKEEGFRVILVNSNPATIMTDPAMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+    V +++EKERPDALLPTMGGQTALN A+ L + G LEK+GVE+IGA  D 
Sbjct: 63   ATYIEPIKWATVAKIIEKERPDALLPTMGGQTALNCALDLEKHGVLEKFGVEMIGANADT 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  F +AMK IG+  P SGI + +DE   + +++G FP IIRP+FT+GGTGGGI
Sbjct: 123  IDKAEDRSRFDKAMKNIGLACPVSGIAHNMDEAYGVLDKVG-FPCIIRPSFTMGGTGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEFE IC  GL  S TS++L+++SL+GWKEYE+EV+RD  DN +I+CSIEN DPMG
Sbjct: 182  AYNREEFEEICARGLDLSPTSELLIDESLIGWKEYEMEVVRDKKDNCIIVCSIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGVE GGSNVQF + P  G ++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQIMRNASLAVLREIGVETGGSNVQFGICPNTGRMVVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT  +TPASFEP+IDYVVTK+PR
Sbjct: 302  PRVSRSSALASKATGFPIAKIAAKLAVGYTLDELQNDITGGRTPASFEPAIDYVVTKVPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCS-NVKELDWD 505
            FAFEKFP ++  LTTQMKSVGE MA+GRTFQES QKALR LE G +G+    N+ +++ +
Sbjct: 362  FAFEKFPKADARLTTQMKSVGEVMAIGRTFQESMQKALRGLEVGATGFDPKLNLADVEAE 421

Query: 506  WEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQS 565
               LK  L VP  +R+  +  A + G  V+++  L+ ID WFL Q ++L++ E+ + T  
Sbjct: 422  -STLKRELTVPGAERIWYVADAFRAGKSVEDVFALTKIDPWFLVQIEDLVNEEEQVKTLG 480

Query: 566  VSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANT 625
            +S++ +D  Y++KR+GFSD ++A     TEK +R  R  L V+P YKRVDTCAAEF  +T
Sbjct: 481  LSSIDRDLMYKLKRKGFSDARLAKLLGVTEKNLRSHRHKLKVLPVYKRVDTCAAEFATDT 540

Query: 626  PYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNS 685
             YMYS+Y+ ECE+ P+ + K++ILGGGPNRIGQGIEFDYCC H + +++  GYETIM+N 
Sbjct: 541  AYMYSTYEEECEANPSSRDKIMILGGGPNRIGQGIEFDYCCVHAALAMREDGYETIMVNC 600

Query: 686  NPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEH 745
            NPETVSTDYDTSDRLYFEP+T+EDVL ++ +E+P+G+IVQ+GGQTPLK    I + L+E 
Sbjct: 601  NPETVSTDYDTSDRLYFEPVTLEDVLEIVRVEQPKGVIVQYGGQTPLK----ICRALEEA 656

Query: 746  RLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEI 805
             +P         I GTSPD+ID AEDRERF  +++ L++ QP+   A+SE +A+A +K I
Sbjct: 657  GVP---------IIGTSPDAIDRAEDRERFQQMVQRLNLRQPQNATARSEEEAIAASKAI 707

Query: 806  GYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALA 865
            GYP+VVRPSYVLGGRAMEIVY +E L  Y+  AV+V  + PVL+D +L+ AIE+DVDA+ 
Sbjct: 708  GYPLVVRPSYVLGGRAMEIVYEEEELKRYMREAVQVSNDSPVLLDHFLNCAIEVDVDAVC 767

Query: 866  DSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMN 925
            D    VVIG IM+HIEQAGVHSGDSAC +P  ++     D I     K+A  L+V GLMN
Sbjct: 768  DG-EQVVIGAIMQHIEQAGVHSGDSACSLPAYSLPQHIQDEIREQVRKMALELDVVGLMN 826

Query: 926  CQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPK 985
             Q A+    D+Y+LE NPRASRTVPFVSK IG  LAK AA VM+GK+L ++GFTKE+IP 
Sbjct: 827  VQMAVQGE-DIYVLEVNPRASRTVPFVSKCIGESLAKVAARVMAGKTLAEIGFTKEIIPP 885

Query: 986  HVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVF 1045
              SVKEAV PF KF G D +LGPEM+STGEVMG+  SF  AFAKAQ+ A + LP SG  F
Sbjct: 886  FFSVKEAVFPFAKFPGVDTILGPEMKSTGEVMGVGDSFAEAFAKAQLGASEILPTSGCAF 945

Query: 1046 LSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVA 1105
            +S+ +  KP +E++A+  + +GF++V+T+GTA  +E  G+ V RV K+ EGRPH  DM+ 
Sbjct: 946  ISVREDDKPCVEQVARDLIGLGFEVVATAGTARIIEAAGLPVRRVNKVTEGRPHVVDMIK 1005

Query: 1106 NGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTVTMT 1165
            N ++ +++ T+ G      D   +RR  L +K+ + TT++G  A  EA++     TV   
Sbjct: 1006 NDEVTLIINTTEGRQ-SIADSYSIRRNALQHKICITTTIAGGQAICEALKFGPEKTVRR- 1063

Query: 1166 ALQDF 1170
             LQD 
Sbjct: 1064 -LQDL 1067


>gi|345864625|ref|ZP_08816824.1| carbamoyl-phosphate synthase large chain [endosymbiont of Tevnia
            jerichonana (vent Tica)]
 gi|345124322|gb|EGW54203.1| carbamoyl-phosphate synthase large chain [endosymbiont of Tevnia
            jerichonana (vent Tica)]
          Length = 1069

 Score = 1281 bits (3314), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 641/1088 (58%), Positives = 813/1088 (74%), Gaps = 28/1088 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILI+GAGPIVIGQACEFDYSG QACKAL+EEG+ VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIKSILIIGAGPIVIGQACEFDYSGAQACKALREEGFRVILVNSNPATIMTDPEMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+T E+V +++EKE+PDALLPTMGGQTALN A+ L   G LEK+GVE+IGA  +A
Sbjct: 63   ATYIEPITWEVVARIIEKEQPDALLPTMGGQTALNCALDLVREGVLEKHGVEMIGASREA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDRDLF+QAM+ IG+  P SGI ++++E   +   IG +P IIRP+FT+GG+GGGI
Sbjct: 123  IDKAEDRDLFRQAMRKIGLDMPRSGIAHSMEEAHQVQASIG-YPAIIRPSFTMGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN EEF  IC+ GL  S TS++L+E+S+LGWKEYE+EV+RD  DN +IICSIEN+DPMG
Sbjct: 182  AYNPEEFIEICERGLDLSPTSELLIEESILGWKEYEMEVVRDRNDNCIIICSIENLDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGVE GGSNVQF++NP DG +++IEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQIMRNASLAVLREIGVETGGSNVQFSINPADGRMIIIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITK-KTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT   TPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGYTLDELQNDITGGATPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            FAFEKFP ++  LTTQMKSVGE MA+GR+FQE+ QKALR LE G  G  C  V   D + 
Sbjct: 362  FAFEKFPLADDRLTTQMKSVGEVMAIGRSFQEALQKALRGLETGKYGL-CEIV---DAEA 417

Query: 507  EQLKYSL----RVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLL 562
            E ++ +L    R+P P+R+  +  A + GM +DE+HE S +D WFL Q +EL+++E+ + 
Sbjct: 418  EDVRGTLVREMRLPGPERIWYLADAFRLGMDLDEVHEHSRVDPWFLVQIEELVNLEREVA 477

Query: 563  TQSVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFE 622
             Q +  +  D    +KR+GF+DK++A  T S+E E+RE+R   GV P +KRVDTCAAEF 
Sbjct: 478  GQGIEALDADRLRYLKRKGFADKRLAMLTGSSESEIRERRHQAGVRPVFKRVDTCAAEFA 537

Query: 623  ANTPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIM 682
             +T YMYS+Y+ ECE+ P+ ++K+++LGGGPNRIGQGIEFDYCC H +F+++  GYETIM
Sbjct: 538  TSTAYMYSTYEEECEAMPSDRQKIMVLGGGPNRIGQGIEFDYCCVHAAFAMREDGYETIM 597

Query: 683  MNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYL 742
            +N NPETVSTDYDTSDRLYFEPLT+EDVL VID E+P G+IVQ+GGQTPLKL+    Q L
Sbjct: 598  VNCNPETVSTDYDTSDRLYFEPLTLEDVLEVIDKEQPVGVIVQYGGQTPLKLA----QDL 653

Query: 743  DEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIA 802
            +    P         I GTSPDSID AEDRERF  ++++L ++QP    A     A+ +A
Sbjct: 654  EAAGAP---------IIGTSPDSIDLAEDRERFQKLVEKLDLKQPPNRTATEAEQAVQLA 704

Query: 803  KEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVD 862
            +EIGYP+VVRPSYVLGGRAMEIVY +E L  Y+  AV V  + PVL+D++L DAIE+D+D
Sbjct: 705  EEIGYPLVVRPSYVLGGRAMEIVYGEEDLRRYMREAVSVSNDSPVLLDRFLDDAIEVDID 764

Query: 863  ALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCG 922
            A+ D   +V+IG IMEHIEQAGVHSGDSAC +P  T+S S  D +     ++A  L V G
Sbjct: 765  AICDG-KDVLIGSIMEHIEQAGVHSGDSACSLPPYTLSPSVQDRMREQIRQMALELKVIG 823

Query: 923  LMNCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEV 982
            LMN Q+AI    ++YLLE NPRASRTVPFVSKA G PLAK AA  M+G SL + GFTKEV
Sbjct: 824  LMNTQFAIKDD-EIYLLEVNPRASRTVPFVSKATGVPLAKVAARCMAGTSLAEQGFTKEV 882

Query: 983  IPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSG 1042
            IP++  VKEAV PF KF G D +LGPEM+STGEVMG+  SF  A+ KA +  G  LP  G
Sbjct: 883  IPENYFVKEAVFPFVKFPGVDTVLGPEMKSTGEVMGVGKSFGEAYNKAILGGGSALPQGG 942

Query: 1043 TVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGD 1102
               +S+ D  K    R+AK   ++GF++ +T GTA  + +  I  ERV K+ EGRPH  D
Sbjct: 943  KALISVRDADKVRAVRVAKDLHELGFELCATGGTAKAINVADIPCERVNKVKEGRPHIVD 1002

Query: 1103 MVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTV 1162
            M+ N +I  +V T+ G +    D  ++RR  L +KV   TT+SGA A   A++ L  + V
Sbjct: 1003 MIKNREISFIVNTTEG-AKAIADSAEIRRAALQHKVSYTTTISGAEATCLALKQL--DAV 1059

Query: 1163 TMTALQDF 1170
            ++  LQD 
Sbjct: 1060 SVNRLQDL 1067


>gi|117926298|ref|YP_866915.1| carbamoyl-phosphate synthase large subunit [Magnetococcus marinus
            MC-1]
 gi|117610054|gb|ABK45509.1| carbamoyl-phosphate synthase large subunit [Magnetococcus marinus
            MC-1]
          Length = 1074

 Score = 1280 bits (3313), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 634/1090 (58%), Positives = 814/1090 (74%), Gaps = 24/1090 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTDL+KI+++G+GPIVIGQACEFDYSG QACKALKEEGYEV+L+NSNPATIMTDP LAD
Sbjct: 3    KRTDLKKIMLIGSGPIVIGQACEFDYSGAQACKALKEEGYEVVLVNSNPATIMTDPELAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
            RTY+ P+T   V +++ KERPDA+LPTMGGQTALN+A+ LA++G LE+Y VELIGA  DA
Sbjct: 63   RTYVEPITLASVTRIIAKERPDAILPTMGGQTALNMALNLADAGVLEQYNVELIGASRDA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR+ FKQAM  IG++ P SG  ++++E   I  E+G +P IIRP+FTLGGTGGGI
Sbjct: 123  ISKAEDRERFKQAMDDIGLEMPKSGFAHSMEEAWEIQTEVG-YPTIIRPSFTLGGTGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN EEFE I + GLAAS T++VLVE+S+LGWKE+E+EV+RD  DN +I+CSIEN DPMG
Sbjct: 182  AYNSEEFEEIIRRGLAASPTTEVLVEESVLGWKEFEMEVVRDRLDNAIIVCSIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ LRD SIA++REIGV+ GGSNVQFA++P +G ++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQILRDVSIAVLREIGVDTGGSNVQFAIHPENGRLVVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRF 447
            PRVSRSSALASKATGFPIAK+AAKL++GY+L +I NDIT  TPASFEP+IDYVVTKIPRF
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAIGYTLPEIMNDITGVTPASFEPTIDYVVTKIPRF 361

Query: 448  AFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDWE 507
             FEKFP +  LLTTQMKSVGEAMA+GRTF+ES QKALRS+E G  G+G   +   D  WE
Sbjct: 362  TFEKFPQASALLTTQMKSVGEAMAIGRTFKESLQKALRSMEIGLDGFG-EILDVADESWE 420

Query: 508  Q-LKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
              L+  L  P PDR+  +  A ++G  ++ ++ ++ ID WFL Q +++++ E  +   S 
Sbjct: 421  AVLEERLHNPGPDRILYVAEAFRQGKDLEWLNRVTAIDPWFLDQIQQIVEAEASIRGVSF 480

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
             N++     E+K  GFSD ++A  T++++  VR  RL+ GV+P +KRVDTC AEF + T 
Sbjct: 481  ENISIPRLRELKEMGFSDARLARLTQTSDTAVRTSRLTHGVVPVFKRVDTCGAEFASQTA 540

Query: 627  YMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSN 686
            Y+Y++Y+  CE+AP+ +KK++ILGGGPNRIGQGIEFDYCC H +F+L+   YETIM+N N
Sbjct: 541  YLYATYEQVCEAAPSSRKKIMILGGGPNRIGQGIEFDYCCVHAAFALRDVDYETIMVNCN 600

Query: 687  PETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHR 746
            PETVSTDYDTSDRLYFEPLT EDV+ ++D+E+P+G+IVQFGGQTPLKL+          R
Sbjct: 601  PETVSTDYDTSDRLYFEPLTFEDVMTIVDIEKPDGVIVQFGGQTPLKLA---------KR 651

Query: 747  LPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEIG 806
            L +A     V I GT+P++ID AEDRERF  ++++L + QP  GIA+SE +A+  A+ IG
Sbjct: 652  LEAAG----VPIIGTTPEAIDVAEDRERFQVLLQKLGLRQPPNGIARSEQEAIREAEAIG 707

Query: 807  YPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALAD 866
            +PVVVRPSYVLGGRAMEIV+  + L  Y+  AV+  P+ PVLID +L DAIEIDVD +AD
Sbjct: 708  FPVVVRPSYVLGGRAMEIVHDVKDLERYMRTAVQASPDHPVLIDHFLRDAIEIDVDCIAD 767

Query: 867  SCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNC 926
                 V+ GIMEHIE+AGVHSGDSAC +P  ++    ++ I   T  LA  L V GLMN 
Sbjct: 768  G-KTAVVAGIMEHIEEAGVHSGDSACSLPPYSVGLDLINEIERQTKMLAAALEVKGLMNI 826

Query: 927  QYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPKH 986
            Q+AI   G VY+LE NPRASRTVPFVSKA G P AK AA VM+G+SL +LG T      H
Sbjct: 827  QFAI-QKGAVYILEVNPRASRTVPFVSKATGVPFAKLAARVMAGESLQELGLTHSPKLGH 885

Query: 987  VSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGT--- 1043
            V+VKEAV PFEKF   D +LGPEM+STGEVMG+  +F  AFAKAQ  AG  LP++G    
Sbjct: 886  VAVKEAVFPFEKFMNVDPVLGPEMKSTGEVMGLADTFGAAFAKAQEGAGVYLPMAGKCAN 945

Query: 1044 --VFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAG 1101
              +F+S+ D  K  +   AK  +++G+K+ +TSGTA FLE +G+ VE V K+ EGRPH  
Sbjct: 946  QRIFISVKDEDKHAIVMPAKRLVEMGYKLSATSGTARFLEGEGVPVETVNKVTEGRPHIV 1005

Query: 1102 DMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNT 1161
            D + + ++  +V  ++ D     D   +RR  L  K+P  TTV+G  A   A+ ++++  
Sbjct: 1006 DQMKSNEVA-LVFNTTQDKRALEDSFPIRRTALMSKIPYFTTVAGMRAAVSAMEAMRAGD 1064

Query: 1162 VTMTALQDFF 1171
             +  ALQD++
Sbjct: 1065 FSCKALQDYY 1074


>gi|219871954|ref|YP_002476329.1| carbamoyl phosphate synthase large subunit [Haemophilus parasuis
            SH0165]
 gi|219692158|gb|ACL33381.1| carbamoyl phosphate synthase large subunit [Haemophilus parasuis
            SH0165]
          Length = 1066

 Score = 1280 bits (3313), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 628/1072 (58%), Positives = 810/1072 (75%), Gaps = 22/1072 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD+  ILI+GAGPIVIGQACEFDYSG QACKAL+EEGY+V+L+NSNPATIMTDP +AD
Sbjct: 3    KRTDINTILIIGAGPIVIGQACEFDYSGAQACKALREEGYKVVLVNSNPATIMTDPNMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+    V +++EKERPDA+LPTMGGQTALN A+ L+ +G L+++ VELIGA  DA
Sbjct: 63   VTYIEPIEWRTVAKIIEKERPDAILPTMGGQTALNCALDLSRNGVLKQFNVELIGASEDA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  FKQAM+ IG+  P S I +TL+E +     +G FP +IRP+FT+GG+GGGI
Sbjct: 123  IDKAEDRGRFKQAMEKIGLSCPKSFIAHTLEEALKAQEAVG-FPTLIRPSFTMGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN++EF AIC+ G  AS T ++L+E+S+LGWKEYE+EV+RD  DN +I+CSIEN DPMG
Sbjct: 182  AYNRDEFLAICERGFEASPTHELLIEQSVLGWKEYEMEVVRDKEDNCIIVCSIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGV+ GGSNVQFA+NP +GE++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQIMRNASLAVLREIGVDTGGSNVQFAINPENGEMIVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKK-TPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+L+++ NDIT    PASFEP++DYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGYTLNELRNDITGGLIPASFEPTLDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            FAFEKF  ++  LTTQMKSVGE MA+GRTFQES QKALR LE G  G+       L  + 
Sbjct: 362  FAFEKFANADDRLTTQMKSVGEVMAMGRTFQESLQKALRGLETGICGFNL-----LSEEP 416

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
            E+++  L  P P+R+  +  A   G  +DE+H  S ID WFL Q ++L+  E  L  + +
Sbjct: 417  EKIRRELANPGPNRILYVADAFGAGFSLDEVHHYSKIDPWFLIQIQDLVQEELALEKKQL 476

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
            S++ +++   +KR+GFSDK+IA  TK +EK VR+ R +LG++P YKRVDTCAAEF ++T 
Sbjct: 477  SDLDREELRRLKRKGFSDKRIAQLTKVSEKAVRDYRHTLGILPVYKRVDTCAAEFASDTA 536

Query: 627  YMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSN 686
            Y+YS+Y+ ECE+ P+ +KKV+ILGGGPNRIGQGIEFDYCC H S +L+ AGYETIM+N N
Sbjct: 537  YLYSTYEEECEANPSDRKKVMILGGGPNRIGQGIEFDYCCVHASLALREAGYETIMVNCN 596

Query: 687  PETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHR 746
            PETVSTD+DTSDRLYFEPLT+EDVL V+ +E+P G+IV +GGQTPLKL+  +H+      
Sbjct: 597  PETVSTDFDTSDRLYFEPLTLEDVLEVVRVEKPWGVIVHYGGQTPLKLANALHE------ 650

Query: 747  LPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEIG 806
                  +G V I GTS DSIDAAEDRERF  I+ +L+++QP    A++  +A+A+A E+G
Sbjct: 651  ------NG-VNIIGTSADSIDAAEDRERFQKILHDLNLKQPANRTARNAQEAVAVANEVG 703

Query: 807  YPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALAD 866
            YP+VVRPSYVLGGRAM+IVY DE L  Y+  AV V  + P+L+D +L++AIE+DVD + D
Sbjct: 704  YPLVVRPSYVLGGRAMQIVYNDEELNKYMREAVSVSNDSPILLDHFLNNAIEVDVDCICD 763

Query: 867  SCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNC 926
               N+VIGGIM+H+EQAG+HSGDSAC +P  ++S   LD I   T ++A  L V GLMN 
Sbjct: 764  G-ENMVIGGIMQHVEQAGIHSGDSACSLPAYSLSGEILDEIRRQTKEMAFALGVKGLMNV 822

Query: 927  QYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPKH 986
            Q+A+     VY+LE NPRASRTVPFVSKA G PLAK AA VM+G+SL +L   +EVIP+ 
Sbjct: 823  QFAVQNDV-VYVLEVNPRASRTVPFVSKATGQPLAKIAARVMAGESLAELNALEEVIPQK 881

Query: 987  VSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVFL 1046
              VKEAV PF KF G D +LGPEMRSTGEVMG+  +F  AF KAQ+ AG+++P +G VFL
Sbjct: 882  YFVKEAVFPFIKFPGVDTILGPEMRSTGEVMGVGETFAEAFFKAQLGAGERIPRTGKVFL 941

Query: 1047 SLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVAN 1106
            S+++  KP L  +AK   + G+ + +T GTA FL   GIA + V K+ EGRPH  D + N
Sbjct: 942  SVDNNDKPRLLDVAKRLQEQGYGLCATLGTAKFLRENGIATQIVNKVREGRPHIVDAIKN 1001

Query: 1107 GQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLK 1158
            G+I M++ T +G+     D   +RR  L  +VPV TT++GA A + A+  + 
Sbjct: 1002 GEIAMVINTVNGEPEVIADSHSIRRTALQQRVPVYTTIAGADAISYAVEHIN 1053


>gi|427430774|ref|ZP_18920488.1| Carbamoyl-phosphate synthase large chain [Caenispirillum salinarum
            AK4]
 gi|425878265|gb|EKV26982.1| Carbamoyl-phosphate synthase large chain [Caenispirillum salinarum
            AK4]
          Length = 1081

 Score = 1280 bits (3311), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 636/1096 (58%), Positives = 807/1096 (73%), Gaps = 30/1096 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILI+GAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIQSILIIGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPNMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TY+ P+TPE+V +++EKERPDALLPTMGGQTALN A+ L+E G LEK+GVE+I A+ D 
Sbjct: 63   ATYVEPITPEMVAKIIEKERPDALLPTMGGQTALNTAMKLSEDGTLEKFGVEMIAARRDV 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I+KAEDR LF++AM  IG+++P S + NT+ E  +    +G  P IIRP+FTLGG GGGI
Sbjct: 123  IEKAEDRQLFREAMDKIGLESPKSIVVNTMSEAANALEFVG-LPAIIRPSFTLGGQGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYNKEE+E I   GLAAS T++VLVE+S+LGWKEYE+EV+RD ADN +IICSIEN+DPMG
Sbjct: 182  AYNKEEYEKIVANGLAASPTTEVLVEESVLGWKEYEMEVVRDKADNCIIICSIENIDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDS+TVAPA TLTDKEYQ +RD S+A++REIGV+ GGSNVQFAVNP DG ++VIEMN
Sbjct: 242  VHTGDSVTVAPALTLTDKEYQIMRDASLAVLREIGVDTGGSNVQFAVNPEDGRMVVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRF 447
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT  TPASFEP+IDYVVTKIPRF
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGYTLDELTNDITGCTPASFEPTIDYVVTKIPRF 361

Query: 448  AFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNV--KELDWD 505
             FEKFP +E LLTT MKSVGEAM++GRTF ES QK LRSLE G +G     +   E   +
Sbjct: 362  TFEKFPDAEALLTTSMKSVGEAMSVGRTFAESLQKGLRSLETGLTGLNEIEIAGAEDGTN 421

Query: 506  WEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQS 565
             + ++ +L  P PDR+  I  AM+ G    EI  ++  D WFL Q K ++D E  +    
Sbjct: 422  RDAIRAALAAPRPDRILTIAQAMRHGFTPAEIQAVTKYDPWFLAQIKAIVDAEAEVRKDG 481

Query: 566  VSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANT 625
            + + +      +K+ GFSD ++A    +T   VRE+R +L V P YKR+DTCA EF + T
Sbjct: 482  LPD-SAAGLLRLKKLGFSDPRLAELAGTTPTAVRERREALDVRPVYKRIDTCAGEFPSET 540

Query: 626  PYMYSSYDF------ECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYE 679
            PYMYS Y+       ECES PT +KKV+ILGGGPNRIGQGIEFDYCC H +++L+ AGYE
Sbjct: 541  PYMYSCYEGDGVQKPECESQPTDRKKVVILGGGPNRIGQGIEFDYCCVHAAYALEDAGYE 600

Query: 680  TIMMNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERP----EGIIVQFGGQTPLKLS 735
            TIM+N NPETVSTDYDTSDRLYFEPLT EDV+ +I +E+      G+IVQFGGQTPLKL+
Sbjct: 601  TIMVNCNPETVSTDYDTSDRLYFEPLTAEDVIELIRVEQSNGSVHGVIVQFGGQTPLKLA 660

Query: 736  LPIHQYLDEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSE 795
                     H L SA     + I GTSPD+ID AEDRERF  ++  L ++QP  G+A+S 
Sbjct: 661  ---------HALESAG----IPILGTSPDAIDLAEDRERFQQLLHTLGLKQPPNGLARSV 707

Query: 796  ADALAIAKEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSD 855
             +A A+A  +GYPVVVRPS+VLGGRAM IVY +  L  Y+  AV V  + PVL+D YL+ 
Sbjct: 708  EEARAVAARVGYPVVVRPSFVLGGRAMRIVYDEADLNRYMHEAVVVSGDDPVLLDHYLAG 767

Query: 856  AIEIDVDALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLA 915
            AIE+DVDA+ D    V + G+M+HIE+AGVHSGDSAC +P  ++S   ++ +   T KLA
Sbjct: 768  AIEVDVDAICDGT-RVYVAGVMQHIEEAGVHSGDSACSLPPYSLSDEAVEELKVQTQKLA 826

Query: 916  KRLNVCGLMNCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLND 975
            + L V GLMN Q+A+  +G V++LE NPRASRTVPFV+KA G P+AK AA VM+G+ L+D
Sbjct: 827  EGLGVVGLMNVQFAV-QNGTVFILEVNPRASRTVPFVAKATGRPIAKIAARVMAGERLDD 885

Query: 976  LGFTKEVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAG 1035
                +   P+HV+VKEAV PF +F G D++LGPEM+STGEVMGID  F  AFAK+QI AG
Sbjct: 886  FDLPEMARPRHVAVKEAVFPFARFPGVDIVLGPEMKSTGEVMGIDTDFKRAFAKSQIGAG 945

Query: 1036 QKLPLSGTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHE 1095
             +LPL GTVFLS+ D  KP    +A+ F+D+GF +++TSGTA FL   G+AVE+V K  E
Sbjct: 946  VRLPLEGTVFLSVRDGDKPAALEVARKFVDLGFTLMATSGTAAFLAENGVAVEKVNKKTE 1005

Query: 1096 GRPHAGDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIR 1155
            GRPH  D + +G + ++V T+ G    + D   +R+  L   +   TT+ GA A  +AI 
Sbjct: 1006 GRPHCVDRMVSGDVHVVVNTTEGAQALK-DSFDIRQTALTRNIAHYTTIPGAQAAVDAIE 1064

Query: 1156 SLKSNTVTMTALQDFF 1171
            ++K   + + +LQ +F
Sbjct: 1065 AVKRGALDVASLQSYF 1080


>gi|386392310|ref|ZP_10077091.1| carbamoyl-phosphate synthase, large subunit [Desulfovibrio sp. U5L]
 gi|385733188|gb|EIG53386.1| carbamoyl-phosphate synthase, large subunit [Desulfovibrio sp. U5L]
          Length = 1078

 Score = 1279 bits (3310), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 642/1091 (58%), Positives = 814/1091 (74%), Gaps = 25/1091 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++KI+I+G+GPIVIGQACEFDYSG+QA KALKEEGYEV+L+NSNPATIMTDPGLAD
Sbjct: 3    KRTDIKKIMIIGSGPIVIGQACEFDYSGSQAAKALKEEGYEVVLVNSNPATIMTDPGLAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
            RTYI P+ P  V +++ +E+PDA+LPT+GGQT LN AVALAESG L ++GVELIGA LD 
Sbjct: 63   RTYIEPIEPGTVARIIAREKPDAILPTLGGQTGLNTAVALAESGVLAEHGVELIGASLDV 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            IKKAE RDLF++AM+ IG+K P SGI +T+D+      +I  FP+I+RPAFTLGGTGGG+
Sbjct: 123  IKKAESRDLFRKAMENIGLKVPKSGICHTMDDVREWGRKIA-FPIIVRPAFTLGGTGGGV 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN E+ E I   GLAAS+ S++++E+S+LGWKE+ELEVMRD ADN VIICSIEN+DPMG
Sbjct: 182  AYNMEDLEKISSVGLAASMKSEIMLEQSVLGWKEFELEVMRDRADNCVIICSIENIDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDS TVAP QTLTD EYQ++R+ SIAI+REIGVE GGSNVQFAVNP DGE+++IEMN
Sbjct: 242  VHTGDSATVAPIQTLTDDEYQKMRNASIAIMREIGVETGGSNVQFAVNPADGEMVIIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRF 447
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD+IPNDIT++T ASFEP+IDY V KIPRF
Sbjct: 302  PRVSRSSALASKATGFPIAKIAAKLAVGYTLDEIPNDITRETMASFEPTIDYCVVKIPRF 361

Query: 448  AFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDWE 507
             FEKFPGSE  LTT MKSVGEAM++GR F+E+ QK LRSLE G +G G  + +    D E
Sbjct: 362  TFEKFPGSEDYLTTAMKSVGEAMSIGRNFKEALQKGLRSLEIGVTGLG-PDTEACAPDRE 420

Query: 508  QLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLL----- 562
            QL   +R PN  R+  I  AM+ G+ ++E+ + +++D WFL Q KE++D+E  L      
Sbjct: 421  QLLADMRKPNSRRLFQIRQAMRCGVSLEELFDATWVDPWFLRQIKEIVDMETELAAFPKE 480

Query: 563  -TQSVSNMTKDDFYEVKRRGFSDKQIAFATK-STEKEVREKRLSLGVIPSYKRVDTCAAE 620
               + +   ++     K+ GFSD QIA   +  +  + R+ R  +G+ P+Y  VDTCA E
Sbjct: 481  QVAAGNAACRELLTAAKKNGFSDPQIAALFRLPSHLDARKLRQDMGINPTYYLVDTCAGE 540

Query: 621  FEANTPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYET 680
            FEA TPY YS+Y+   E AP   +KV+ILGGGPNRIGQGIEFDYCCCH S++L++ G E+
Sbjct: 541  FEAYTPYYYSTYETGREVAPKPARKVVILGGGPNRIGQGIEFDYCCCHASYALRALGVES 600

Query: 681  IMMNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQ 740
            IM+NSNPETVSTDYDTSDRLYFEPLT EDVLN+++ E+PEG+IVQFGGQTPL L++P+  
Sbjct: 601  IMVNSNPETVSTDYDTSDRLYFEPLTFEDVLNILEAEKPEGVIVQFGGQTPLNLAVPLL- 659

Query: 741  YLDEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALA 800
                        +  VRI GTSPDSID AEDRERF A++ +L + QP  G A +  +A  
Sbjct: 660  ------------NAGVRILGTSPDSIDRAEDRERFQAMLVKLGLRQPANGTAYAVEEACE 707

Query: 801  IAKEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEID 860
            IA +IGYPVVVRPSYVLGGRAMEIVY  + L  Y   AV    + P+L+DK+L +AIE+D
Sbjct: 708  IADKIGYPVVVRPSYVLGGRAMEIVYDRKDLENYFTYAVVASGKHPILVDKFLVNAIEVD 767

Query: 861  VDALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNV 920
            VDA++D   +  + G+MEHIE+AG+HSGDSAC++P  ++S   ++ I   T+ LA+ L V
Sbjct: 768  VDAVSDGT-DTYVAGVMEHIEEAGIHSGDSACVLPPHSLSPELIEEIERQTVALAEELGV 826

Query: 921  CGLMNCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTK 980
             GLMN Q+A+   GD+Y+LE NPRASRT PFVSKA G PLAK A  V+ GK L DL    
Sbjct: 827  IGLMNIQFAV-KDGDIYILEVNPRASRTSPFVSKATGVPLAKLATNVIMGKKLKDLNPWA 885

Query: 981  EVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPL 1040
            E    + +VKE+V PF +F G DVLLGPEMRSTGEVMGID S  +AF K+Q+ AGQ LPL
Sbjct: 886  ERKTGYYAVKESVFPFNRFPGVDVLLGPEMRSTGEVMGIDASVGLAFMKSQLGAGQNLPL 945

Query: 1041 SGTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHA 1100
            SGTVF+S+ D  K  +   A+   ++GF+I++T GTA +LE KGIAV  V+K+ EGRPH 
Sbjct: 946  SGTVFISVADGAKDDVLPAARILGEVGFRIMATKGTAAYLEGKGIAVTAVMKVFEGRPHV 1005

Query: 1101 GDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSN 1160
             D + N +I  +VI   GD     D L LR+  L Y +P  TT +GA A A+AIR +   
Sbjct: 1006 VDHMKNREID-LVINLVGDKRTVRDSLALRQTALLYGIPYTTTAAGAKAMAQAIREMGGK 1064

Query: 1161 TVTMTALQDFF 1171
             +T+ +LQ+++
Sbjct: 1065 GLTVKSLQEYY 1075


>gi|134094395|ref|YP_001099470.1| carbamoyl phosphate synthase, large subunit [Herminiimonas
            arsenicoxydans]
 gi|133738298|emb|CAL61343.1| carbamoyl phosphate synthase, large subunit (Carbamoyl-phosphate
            synthetase ammonia chain) [Herminiimonas arsenicoxydans]
          Length = 1076

 Score = 1279 bits (3310), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 640/1078 (59%), Positives = 809/1078 (75%), Gaps = 28/1078 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KR D++ ILI+GAGPIVIGQACEFDYSG QACKAL+EEGY+VIL+NSNPATIMTDP +AD
Sbjct: 3    KRIDIKSILIIGAGPIVIGQACEFDYSGAQACKALREEGYKVILVNSNPATIMTDPEMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+T + VE++++KERPDA+LPTMGGQTALN A+ L  +G L KYG ELIGA  +A
Sbjct: 63   VTYIEPITWQAVERIIDKERPDAILPTMGGQTALNCALDLHHNGVLTKYGCELIGASPEA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  FK AM  IG+ +  SG+ +TL+E  ++  E+G FP IIRP+FT+GG+GGGI
Sbjct: 123  IDKAEDRSKFKDAMTKIGLGSARSGVAHTLEESWAVQKELG-FPSIIRPSFTMGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN EEFEAICK GL AS TS++L+E+SL+GWKE+E+EV+RD ADN +I+CSIEN+DPMG
Sbjct: 182  AYNAEEFEAICKRGLEASPTSELLIEESLIGWKEFEMEVVRDKADNCIIVCSIENLDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ +R+ SIA++REIGV+ GGSNVQFA+NP DG +++IEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQIMRNASIAVLREIGVDTGGSNVQFAINPEDGRMIIIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITK-KTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VG++LD++ N+IT   TPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKIAAKLAVGFTLDELRNEITGGATPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            FAFEKFP ++  LTTQMKSVGE MA+GRTFQESFQKALR LE G  G     + E   D 
Sbjct: 362  FAFEKFPQADSHLTTQMKSVGEVMAIGRTFQESFQKALRGLEVGVDG-----MNEKTTDR 416

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
            E ++  L  P P+R+  +  A  +G  ++E+H L+ ID WFL Q KE+ID+E +L TQS+
Sbjct: 417  ETIEEELGEPGPERIWYVGDAFAQGFSLEEVHGLTHIDPWFLAQIKEIIDIELWLDTQSL 476

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
            + + KD  +++K++GF+D+++A   K+T+K VRE+R ++ + P YKRVDTCA EF  NT 
Sbjct: 477  NAIDKDTLFKLKQKGFADRRLAKLLKTTDKAVREQRHAMNIRPVYKRVDTCAGEFATNTA 536

Query: 627  YMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSN 686
            YMYS+Y+ ECE+ PT KKK+++LGGGPNRIGQGIEFDYCC H + +L+  GYETIM+N N
Sbjct: 537  YMYSTYEEECEAQPTNKKKIMVLGGGPNRIGQGIEFDYCCVHAALALREDGYETIMVNCN 596

Query: 687  PETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHR 746
            PETVSTDYDTSDRLYFEPLT+EDVL ++ LE+P G+IVQ+GGQTPLKL+L +        
Sbjct: 597  PETVSTDYDTSDRLYFEPLTLEDVLEIVALEKPYGVIVQYGGQTPLKLALDLE------- 649

Query: 747  LPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEIG 806
               A+G   V I GTSPD IDAAEDRERF  ++ +L + QP    A++E DAL +A+EIG
Sbjct: 650  ---ANG---VPIVGTSPDMIDAAEDRERFQKLLNDLGLRQPPNRTARTEEDALRLAQEIG 703

Query: 807  YPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALAD 866
            YP+VVRPSYVLGGRAMEIV+    L  Y+  AV+V  + PVL+D++L+DAIE+DVD L+D
Sbjct: 704  YPLVVRPSYVLGGRAMEIVHEQRDLERYMREAVKVSHDSPVLLDRFLNDAIEVDVDCLSD 763

Query: 867  SCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNC 926
                  IGG+MEHIEQAGVHSGDSAC +P  ++S   ++ +   T  +AK LNV GLMN 
Sbjct: 764  G-ERTFIGGVMEHIEQAGVHSGDSACSLPPYSLSQETINELKRQTSLMAKGLNVIGLMNV 822

Query: 927  QYAITT-------SGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFT 979
            Q+AI            V++LE NPRASRTVP+VSKA G  LAK AA  M G+SL+  G  
Sbjct: 823  QFAIQQQEIDGKLQDVVFVLEVNPRASRTVPYVSKATGLQLAKIAARCMVGQSLDSQGIF 882

Query: 980  KEVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLP 1039
             EVIP++ SVKEAV PF KF G D +LGPEM+STGEVMG+  +F  AF K+Q+ A  KLP
Sbjct: 883  NEVIPEYFSVKEAVFPFVKFPGVDTILGPEMKSTGEVMGVGKTFGEAFVKSQLGASIKLP 942

Query: 1040 LSGTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPH 1099
             SG VFLS+    KP   ++AK  ++IGF +V+T GTA  +   GI V  V K+ EGRPH
Sbjct: 943  RSGKVFLSVKASDKPRAVQVAKDLVEIGFSVVATKGTAAAISAAGIEVTSVNKVAEGRPH 1002

Query: 1100 AGDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSL 1157
              DM+ N +I +++ T        ID   +R   LA +V   TT++GA A  E +  L
Sbjct: 1003 IVDMIKNDEIALVINTVEEKRSAIIDSRTIRTSALAARVTTFTTIAGAEAAVEGMAHL 1060


>gi|218887394|ref|YP_002436715.1| carbamoyl-phosphate synthase large subunit [Desulfovibrio vulgaris
            str. 'Miyazaki F']
 gi|218758348|gb|ACL09247.1| carbamoyl-phosphate synthase, large subunit [Desulfovibrio vulgaris
            str. 'Miyazaki F']
          Length = 1078

 Score = 1279 bits (3310), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 640/1091 (58%), Positives = 803/1091 (73%), Gaps = 25/1091 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTDL++I+++G+GPIVIGQACEFDYSGTQA KALKEEGYEV+L+NSNPATIMTDPGLAD
Sbjct: 3    KRTDLKRIMVIGSGPIVIGQACEFDYSGTQAVKALKEEGYEVVLVNSNPATIMTDPGLAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
            RTYI P+ PE V  ++ KERPDALLPT+GGQT LN A+ALA  G LE+ GV+LIGA    
Sbjct: 63   RTYIEPIEPETVAAIIRKERPDALLPTLGGQTGLNTALALAAMGVLEECGVDLIGANKQV 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I+KAE R+LF++AM  IG+K P SGI  T+++   +  E+  FPLIIRPAFT+GGTGGGI
Sbjct: 123  IEKAESRELFREAMANIGLKVPASGIARTMEDVRRLGTEM-PFPLIIRPAFTMGGTGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN E+ E I   GLAAS+  +V++E+S+LGWKE+E+EVMRD ADN VIICSIEN DPMG
Sbjct: 182  AYNMEDLEEIAARGLAASIKHEVMIEQSVLGWKEFEMEVMRDKADNCVIICSIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTD EYQ +RD SIAI+REIGVE GGSNVQF +NP +G+++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDVEYQMMRDASIAIMREIGVETGGSNVQFGINPQNGDMVVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRF 447
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD+IPNDIT++T ASFEPSIDY VTKIPRF
Sbjct: 302  PRVSRSSALASKATGFPIAKIAAKLAVGYTLDEIPNDITRETMASFEPSIDYCVTKIPRF 361

Query: 448  AFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDWE 507
             FEKFPG++  LTT MKSVGEAM++GRTF+ES QK LRSLE G  G G S  +    + E
Sbjct: 362  TFEKFPGAKDELTTSMKSVGEAMSIGRTFKESLQKGLRSLEVGAPGLG-SAFRCKGPERE 420

Query: 508  QLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSVS 567
             +   LR PN  R+  +  AM  GM V+EIHE + ID WFL Q K+L+D+E  L   ++ 
Sbjct: 421  DIMRKLRTPNSRRIFYVRHAMLDGMTVEEIHEATAIDPWFLRQMKDLVDMEAELRDFALG 480

Query: 568  N-MTKDD------FYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAE 620
            N MT D+          K  GFSD+Q+A   K  E +VR  R  +G+ P+Y  VDTCA+E
Sbjct: 481  NAMTVDNAELVALMRRAKEYGFSDRQLAEMWKRPESDVRTLRKQMGIAPTYYLVDTCASE 540

Query: 621  FEANTPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYET 680
            FEA TPY YS+Y+   E A   +KKV+ILGGGPNRIGQGIEFDYCCCH SF+L+  G + 
Sbjct: 541  FEAYTPYYYSTYETGHEVAVEDRKKVIILGGGPNRIGQGIEFDYCCCHASFALKEMGVQA 600

Query: 681  IMMNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQ 740
            IM+NSNPETVSTDYDTSDRLYFEPLT EDV+N+I+ E+P+G++VQFGGQTPL L++P+ +
Sbjct: 601  IMVNSNPETVSTDYDTSDRLYFEPLTFEDVMNIIETEKPDGVVVQFGGQTPLNLAVPLMR 660

Query: 741  YLDEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALA 800
                           V I GTSPDSID AEDRERF A++++L + QP      S  +A +
Sbjct: 661  -------------AGVPILGTSPDSIDRAEDRERFQALLQKLGLRQPANATVMSLPEARS 707

Query: 801  IAKEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEID 860
             A  IGYP VVRPSYVLGGRAMEIVY +E L  Y  N+V   P+ P+LIDK+L  AIE+D
Sbjct: 708  AAARIGYPTVVRPSYVLGGRAMEIVYDEEQLAEYFANSVGEKPKHPILIDKFLESAIEVD 767

Query: 861  VDALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNV 920
            VDAL+D   +V + GIMEHIE+AG+HSGDSAC+IP  T+  + ++ I+  T++LA+ L V
Sbjct: 768  VDALSDGT-DVYVAGIMEHIEEAGIHSGDSACVIPPHTLPEAIVNEIARQTVELARELRV 826

Query: 921  CGLMNCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTK 980
             GLMN Q+A+   G +Y+LE NPRASRT PFVSKA   PL + A  +M G +L +L    
Sbjct: 827  VGLMNIQFAV-KDGLIYILEVNPRASRTAPFVSKATAVPLPRLATQIMLGATLKELDPWS 885

Query: 981  EVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPL 1040
                 + SVKE+V PF +F G D+LLGPEMRSTGEVMGI  SF  A+ K Q+A GQ+LP 
Sbjct: 886  MRRTGYFSVKESVFPFNRFPGVDILLGPEMRSTGEVMGIASSFEEAYLKGQLAGGQRLPQ 945

Query: 1041 SGTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHA 1100
            SG +F+S+ND  K  +  +A  F D+GF++++TSGTA  L   G+    V K++EGRP+ 
Sbjct: 946  SGKIFISVNDRDKLLITEVASMFADLGFEVLATSGTAKLLREGGVPATSVHKVYEGRPNI 1005

Query: 1101 GDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSN 1160
             D + NG I +++ T+SG    Q D   +R+  L Y VP  TTVSGA A A+AIR+ +  
Sbjct: 1006 VDFIKNGDIALVLNTASGKRTVQ-DSKSIRQATLMYGVPYSTTVSGAKAIAQAIRASRCC 1064

Query: 1161 TVTMTALQDFF 1171
             V + +LQ+++
Sbjct: 1065 GVNVKSLQEYY 1075


>gi|53803859|ref|YP_114289.1| carbamoyl-phosphate synthase large subunit [Methylococcus capsulatus
            str. Bath]
 gi|53757620|gb|AAU91911.1| carbamoyl-phosphate synthase, large subunit [Methylococcus capsulatus
            str. Bath]
          Length = 1072

 Score = 1279 bits (3310), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 642/1084 (59%), Positives = 812/1084 (74%), Gaps = 20/1084 (1%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ IL+LGAGPIVIGQACEFDYSG QACKALKEEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIKSILLLGAGPIVIGQACEFDYSGAQACKALKEEGYRVILVNSNPATIMTDPEMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  + V +++EKERPDALLPTMGGQTALN A+ L   G LE++GVE+IGA  +A
Sbjct: 63   ATYIEPIDWQTVARIIEKERPDALLPTMGGQTALNCALDLDREGVLERFGVEMIGASREA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDRD F++AM  IG+  P S + ++L+E +S+ + +G +P IIRP+FTLGG+GGGI
Sbjct: 123  IAKAEDRDQFRKAMIKIGLSVPKSEVAHSLEEALSVLDMVG-YPAIIRPSFTLGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEF  IC+ GL  S T ++L+E+S+LGWKEYE+EV+RD ADN +I+CSIEN+DPMG
Sbjct: 182  AYNREEFVEICERGLELSPTHELLIEESVLGWKEYEMEVVRDRADNCIIVCSIENLDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ +RD SIA++REIGV+ GGSNVQFAVNP DG ++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQIMRDASIAVLREIGVDTGGSNVQFAVNPRDGRLIVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITK-KTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ N+IT    PASFEP+IDYVVTK+PR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGYTLDELRNEITGGAMPASFEPTIDYVVTKVPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            F FEKFP ++  LTTQMKSVGEAMA+GRTFQES QKALRSLE G  G       + D   
Sbjct: 362  FTFEKFPQADDRLTTQMKSVGEAMAIGRTFQESLQKALRSLEIGVDGLVGKLTADSDDRV 421

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
            E+L+  L  P  DR+  +  A + G  +D++HELS ID WFL Q ++LI  E  L  +++
Sbjct: 422  ERLQRELGHPGCDRLFYVADAFRLGWSLDQVHELSAIDPWFLAQIEDLILEEAALAKRTL 481

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
            +++T D+   +KR+GFSD ++A     +E EVR  R   G+ P YKR+D+CAAEF   T 
Sbjct: 482  ASLTPDELLALKRKGFSDSRLARLLDRSEAEVRAVRHRFGIRPVYKRIDSCAAEFATVTA 541

Query: 627  YMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSN 686
            Y+YS+Y+ ECE+APT ++K+++LGGGPNRIGQGIEFDYCC H + +L+  G+ETIM+N N
Sbjct: 542  YLYSTYEEECEAAPTDREKIVVLGGGPNRIGQGIEFDYCCVHAAMALREDGFETIMINCN 601

Query: 687  PETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHR 746
            PETVSTD+DTSDRLYFEPLT+EDVL V+ LE+P+G+IVQ+GGQTPLKL+          R
Sbjct: 602  PETVSTDFDTSDRLYFEPLTLEDVLEVVHLEKPKGVIVQYGGQTPLKLA----------R 651

Query: 747  LPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEIG 806
               A+G   V I GTSPDSID AEDRERF  +I  L+++QP    A+S  +AL  A+EIG
Sbjct: 652  ALEAAG---VPIIGTSPDSIDLAEDRERFQKLIDRLNLKQPPNRTARSLEEALRGAQEIG 708

Query: 807  YPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALAD 866
            YP+VVRPSYVLGGRAMEIV+ D+ L  Y+  AV V  E PVL+D++LSDAIE+DVDA+AD
Sbjct: 709  YPLVVRPSYVLGGRAMEIVFNDDDLKRYMLEAVSVSNESPVLLDRFLSDAIEMDVDAVAD 768

Query: 867  SCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNC 926
                V+IGG+M+HIEQAGVHSGDSAC IP   + +   D +      LA+ L V GLMN 
Sbjct: 769  G-QRVMIGGLMQHIEQAGVHSGDSACSIPPYDLRADIQDRVREQVRLLAEALGVVGLMNT 827

Query: 927  QYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPKH 986
            Q+AI    ++++LE NPRASRTVPFVSKA G+PLAK AA  M G+SL+  G ++E +P +
Sbjct: 828  QFAIQDD-EIFVLEVNPRASRTVPFVSKATGYPLAKVAARCMVGRSLDQQGVSEERVPPY 886

Query: 987  VSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVFL 1046
             SVKEAV PF KF G D LLGPEM+STGEVMG+  SF  A+AKAQ AA  +L   GT  +
Sbjct: 887  FSVKEAVFPFIKFPGVDPLLGPEMKSTGEVMGVGASFGEAYAKAQRAASVRLAYEGTTLI 946

Query: 1047 SLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVAN 1106
            S+ D  KP +  IAKA +  GF++V+T GTA  L+  G+  E+V K++EGRPH  DM+ N
Sbjct: 947  SIRDADKPKIVPIAKALVARGFRLVATRGTAKVLQDAGVPCEKVNKVYEGRPHIVDMIKN 1006

Query: 1107 GQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTVTMTA 1166
            GQIQ+++ T+ G      D   +RR+ L ++V   TT+SGA A   A+  L S  V +  
Sbjct: 1007 GQIQLIINTTEGKKA-IADSFTIRRQALQHQVTYTTTISGAHAICCALDELGS--VDVNR 1063

Query: 1167 LQDF 1170
            LQD 
Sbjct: 1064 LQDL 1067


>gi|308270123|emb|CBX26735.1| Carbamoyl-phosphate synthase large chain [uncultured Desulfobacterium
            sp.]
          Length = 1073

 Score = 1279 bits (3309), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 631/1090 (57%), Positives = 808/1090 (74%), Gaps = 27/1090 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD+ KILI+GAGPI+I QACEFDYSGTQACKALKE+GYEV+L+NSNPATIMTDP +A 
Sbjct: 3    KRTDINKILIIGAGPIIISQACEFDYSGTQACKALKEDGYEVVLVNSNPATIMTDPDMAH 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
            RTYI P+TPE+V  ++EKE PDALLPT+GGQT LN A+ +A+ G LEK+GVE+IGA +++
Sbjct: 63   RTYIEPVTPEIVAMIIEKEHPDALLPTLGGQTGLNTAIEVAKMGVLEKFGVEMIGASIES 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDRDLF++AM  IG++ P SGI   ++  I I + IG FP+I+RP+FTLGGTGGG+
Sbjct: 123  INKAEDRDLFRKAMNRIGLRIPESGIATNMEMAIKIVDTIG-FPVIVRPSFTLGGTGGGV 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN E+ E I K+G  ASL  Q+++E+S+LGWKEYELEVMRD  DNVVIICSIEN+DPMG
Sbjct: 182  AYNFEDLEIIAKSGFDASLIGQIMLEESVLGWKEYELEVMRDKNDNVVIICSIENMDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            +HTGDSITVAPAQTLTD EYQ++R+ S+AI+REIGV+ GGSNVQFAVNPV+G+++V+EMN
Sbjct: 242  IHTGDSITVAPAQTLTDAEYQKMRNASLAIMREIGVDTGGSNVQFAVNPVNGDMIVVEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRF 447
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD+I NDIT +T ASFEP++DY V KIPRF
Sbjct: 302  PRVSRSSALASKATGFPIAKIAAKLAVGYTLDEIQNDITGETLASFEPTLDYCVVKIPRF 361

Query: 448  AFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDW--- 504
             FEKFP ++  LTT MKS+GE MA+GRTF+E+ QK LRSLE G  G G    K+L +   
Sbjct: 362  TFEKFPETKDYLTTAMKSIGETMAIGRTFKEALQKGLRSLEIGRFGLGADG-KDLTFPEG 420

Query: 505  ---DWEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFL 561
                  ++++ L +PN  R+  I  A+  GM V+ I EL+ ID WFL Q K+++D EQ +
Sbjct: 421  EKISTSEIEHKLSIPNSQRIFYIRYALLNGMSVNSIFELTAIDPWFLYQIKQIVDFEQ-I 479

Query: 562  LTQSVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEF 621
            +  +  N+++D   + K  GFSD QIA+ T S E  V++ R +L +   YK VDTCAAEF
Sbjct: 480  IADAGKNISEDLLRKAKSYGFSDVQIAYLTGSDEDSVKKLRETLNIRAVYKLVDTCAAEF 539

Query: 622  EANTPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETI 681
            +A TPY YS+Y+ E E+  + +KKV+ILGGGPNRIGQGIEFDYCC   SF ++  G E+I
Sbjct: 540  KAATPYYYSTYEEENEARVSDRKKVMILGGGPNRIGQGIEFDYCCVQASFGIREEGIESI 599

Query: 682  MMNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQY 741
            M+NSNPETVSTDYDTSD+LYFEPLT EDVLN+++ E+P G+IVQFGGQTPL L+ P+   
Sbjct: 600  MVNSNPETVSTDYDTSDKLYFEPLTKEDVLNIVETEKPFGVIVQFGGQTPLNLATPLF-- 657

Query: 742  LDEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAI 801
                       +  V I GT P+SID AE+RE F  ++K+L + QP+ G A +  +A  I
Sbjct: 658  -----------NAGVPIIGTQPESIDNAENRELFKVMLKKLGLVQPENGTALNIKEATII 706

Query: 802  AKEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDV 861
            A+ IGYPV++RPS+VLGGRAM+IVY  + L  +   A+E  P  PVLIDK+L +A+E+DV
Sbjct: 707  AESIGYPVILRPSFVLGGRAMKIVYNRKDLENFTRIAIEASPVHPVLIDKFLEEAVEVDV 766

Query: 862  DALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVC 921
            DA++D     +I GIMEHIE AGVHSGDSAC++P  +IS   +D I+S T  +A  L V 
Sbjct: 767  DAISDGKAT-IICGIMEHIEAAGVHSGDSACVLPPHSISKDIIDQITSATKAMATELKVI 825

Query: 922  GLMNCQYAITTSGD-VYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTK 980
            GLMN QYAI   GD +Y+LE NPRASRT+PFVSKA G P AK A  VM G+SL+DLG   
Sbjct: 826  GLMNVQYAI--KGDKLYILEVNPRASRTIPFVSKATGIPFAKLATKVMLGRSLSDLGLVS 883

Query: 981  EVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPL 1040
            E +P HVS+KE VLPF +F   D LLGPEM+STGEVMGID SF +AFAKAQ+ AGQK+P 
Sbjct: 884  EKVPTHVSIKEVVLPFNRFPDVDTLLGPEMKSTGEVMGIDSSFGLAFAKAQLGAGQKIPT 943

Query: 1041 SGTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHA 1100
            SG VF+S+ D  K  +  +A  F D+GF I++T GT+ FL    I  E + K+  GRPH 
Sbjct: 944  SGNVFISVMDSDKKSVIPVASKFYDMGFHILATKGTSTFLAEHDIPNESINKVSMGRPHV 1003

Query: 1101 GDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSN 1160
             D + N  + +++ T +G    + DG ++RR  + Y VP ITT+ GALA    I  LK  
Sbjct: 1004 VDAIKNKSLHLIINTGTGAEPMR-DGYEIRRAAIKYNVPCITTIPGALAICRGIEELKGK 1062

Query: 1161 TVTMTALQDF 1170
             +++ ALQD+
Sbjct: 1063 KLSVKALQDY 1072



 Score =  243 bits (619), Expect = 7e-61,   Method: Compositional matrix adjust.
 Identities = 152/430 (35%), Positives = 238/430 (55%), Gaps = 26/430 (6%)

Query: 60  RVRASSAKIDSSAELSNGA-----ASSKDQKLGKRTDLRKILILGAGPIVIGQACEFDYS 114
            +RA    +D+ A     A     ++ +++   + +D +K++ILG GP  IGQ  EFDY 
Sbjct: 524 NIRAVYKLVDTCAAEFKAATPYYYSTYEEENEARVSDRKKVMILGGGPNRIGQGIEFDYC 583

Query: 115 GTQACKALKEEGYEVILINSNPATIMTDPGLADRTYITPMTPELVEQVLEKERPDALLPT 174
             QA   ++EEG E I++NSNP T+ TD   +D+ Y  P+T E V  ++E E+P  ++  
Sbjct: 584 CVQASFGIREEGIESIMVNSNPETVSTDYDTSDKLYFEPLTKEDVLNIVETEKPFGVIVQ 643

Query: 175 MGGQTALNLAVALAESGALEKYGVELIGAKLDAIKKAEDRDLFKQAMKTIGVKTPPSGIG 234
            GGQT LNLA  L  +      GV +IG + ++I  AE+R+LFK  +K +G+  P +G  
Sbjct: 644 FGGQTPLNLATPLFNA------GVPIIGTQPESIDNAENRELFKVMLKKLGLVQPENGTA 697

Query: 235 NTLDECISIANEIGEFPLIIRPAFTLGGTGGGIAYNKEEFEAICKAGLAASLTSQVLVEK 294
             + E   IA  IG +P+I+RP+F LGG    I YN+++ E   +  + AS    VL++K
Sbjct: 698 LNIKEATIIAESIG-YPVILRPSFVLGGRAMKIVYNRKDLENFTRIAIEASPVHPVLIDK 756

Query: 295 SLLGWKEYELEVMRDLADNVVIICSI-ENVDPMGVHTGDSITVAPAQTLTDKEYQRLRDY 353
            L    E +++ + D      IIC I E+++  GVH+GDS  V P  +++     ++   
Sbjct: 757 FLEEAVEVDVDAISD--GKATIICGIMEHIEAAGVHSGDSACVLPPHSISKDIIDQITSA 814

Query: 354 SIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMNPRVSRSSALASKATGFPIAKMAAKLS 413
           + A+  E+ V  G  NVQ+A+     ++ ++E+NPR SR+    SKATG P AK+A K+ 
Sbjct: 815 TKAMATELKV-IGLMNVQYAIK--GDKLYILEVNPRASRTIPFVSKATGIPFAKLATKVM 871

Query: 414 VGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRFAFEKFPGSEPLLTTQMKSVGEAMALG 473
           +G SL  +   +++K P     SI  VV       F +FP  + LL  +MKS GE M + 
Sbjct: 872 LGRSLSDL-GLVSEKVPTHV--SIKEVV-----LPFNRFPDVDTLLGPEMKSTGEVMGID 923

Query: 474 RTFQESFQKA 483
            +F  +F KA
Sbjct: 924 SSFGLAFAKA 933


>gi|419954425|ref|ZP_14470563.1| carbamoyl phosphate synthase large subunit [Pseudomonas stutzeri
            TS44]
 gi|387968758|gb|EIK53045.1| carbamoyl phosphate synthase large subunit [Pseudomonas stutzeri
            TS44]
          Length = 1073

 Score = 1278 bits (3308), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 632/1085 (58%), Positives = 811/1085 (74%), Gaps = 22/1085 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILILGAGPIVIGQACEFDYSG QACKALKEEG+ VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIKSILILGAGPIVIGQACEFDYSGAQACKALKEEGFRVILVNSNPATIMTDPAMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+    V +++EKERPDALLPTMGGQTALN A+ L + G LEK+GVE+IGA  D 
Sbjct: 63   ATYIEPIKWATVAKIIEKERPDALLPTMGGQTALNCALDLEKHGVLEKFGVEMIGANADT 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  F +AM+ IG+  P SGI + +DE   + +++G FP IIRP+FT+GGTGGGI
Sbjct: 123  IDKAEDRSRFDKAMRDIGLACPVSGIAHNMDEAYGVLDKVG-FPCIIRPSFTMGGTGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEFE IC  GL  S TS++L+++SL+GWKEYE+EV+RD  DN +I+CSIEN DPMG
Sbjct: 182  AYNREEFEEICARGLDLSPTSELLIDESLIGWKEYEMEVVRDKKDNCIIVCSIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGVE GGSNVQF + P  G ++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQIMRNASLAVLREIGVETGGSNVQFGICPNTGRMVVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT  +TPASFEP+IDYVVTK+PR
Sbjct: 302  PRVSRSSALASKATGFPIAKIAAKLAVGYTLDELQNDITGGRTPASFEPAIDYVVTKVPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            FAFEKFP ++  LTTQMKSVGE MA+GRTFQES QKALR LE G +G+    +   D + 
Sbjct: 362  FAFEKFPKADARLTTQMKSVGEVMAIGRTFQESMQKALRGLEVGATGFD-PKLNLADAEA 420

Query: 507  EQ-LKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQS 565
            E  LK  L VP  +R+  +  A + G  ++++  L+ ID WFL Q ++L+  E+ + T  
Sbjct: 421  ESTLKRELTVPGAERVWYVADAFRAGKSIEDVFALTKIDPWFLVQIEDLVKEEEQVKTLG 480

Query: 566  VSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANT 625
            +S++ +D  Y++KR+GFSD ++A     TEK +R  R  L V+P YKRVDTCAAEF  +T
Sbjct: 481  LSSIDRDLMYKLKRKGFSDARLAKLLGVTEKNLRSHRHKLKVLPVYKRVDTCAAEFATDT 540

Query: 626  PYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNS 685
             YMYS+Y+ ECE+  + + K++ILGGGPNRIGQGIEFDYCC H + +++  GYETIM+N 
Sbjct: 541  AYMYSTYEQECEANASSRDKIMILGGGPNRIGQGIEFDYCCVHAALAMREDGYETIMVNC 600

Query: 686  NPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEH 745
            NPETVSTDYDTSDRLYFEP+T+EDVL ++ +E+P+G+IVQ+GGQTPLK    I + L+E 
Sbjct: 601  NPETVSTDYDTSDRLYFEPVTLEDVLEIVRVEQPKGVIVQYGGQTPLK----ICRALEEA 656

Query: 746  RLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEI 805
             +P         I GTSPD+ID AEDRERF  +++ L++ QP+   A+SE +A+A +K I
Sbjct: 657  GVP---------IIGTSPDAIDRAEDRERFQQMVQRLNLRQPQNATARSEEEAIAASKAI 707

Query: 806  GYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALA 865
            GYP+VVRPSYVLGGRAMEIVY +E L  Y+  AV+V  + PVL+D +L+ AIE+DVDA+ 
Sbjct: 708  GYPLVVRPSYVLGGRAMEIVYEEEELKRYMREAVQVSNDSPVLLDHFLNCAIEVDVDAVC 767

Query: 866  DSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMN 925
            D    VVIG IM+HIEQAGVHSGDSAC +P  ++S    D I     K+A  L+V GLMN
Sbjct: 768  DG-EQVVIGAIMQHIEQAGVHSGDSACSLPAYSLSQHIQDEIREQVRKMALELDVVGLMN 826

Query: 926  CQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPK 985
             Q A+    D+Y+LE NPRASRTVPFVSK IG  LAK AA VM+GK+L ++GFTKE+IP 
Sbjct: 827  VQMAVQGE-DIYVLEVNPRASRTVPFVSKCIGESLAKVAARVMAGKTLAEIGFTKEIIPP 885

Query: 986  HVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVF 1045
              SVKEAV PF KF G D +LGPEM+STGEVMG+  SF  AFAKAQ+ A + LP SG  F
Sbjct: 886  FFSVKEAVFPFAKFPGVDTILGPEMKSTGEVMGVGDSFAEAFAKAQLGASEILPTSGCAF 945

Query: 1046 LSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVA 1105
            LS+ +  KP++E++A+  + +GF++V+T+GTA  +E  G+ V RV K+ EGRPH  DM+ 
Sbjct: 946  LSVREDDKPYVEQVARDLIGLGFEVVATAGTARIIEAAGLPVRRVNKVTEGRPHVVDMIK 1005

Query: 1106 NGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTVTMT 1165
            N ++ +++ T+ G      D   +RR  L +K+ + TT++G  A  EA++     TV   
Sbjct: 1006 NDEVTLIINTTEGRQ-SIADSYSIRRNALQHKICITTTIAGGQAICEALKFGPEKTVRR- 1063

Query: 1166 ALQDF 1170
             LQD 
Sbjct: 1064 -LQDL 1067


>gi|421481877|ref|ZP_15929460.1| carbamoyl phosphate synthase large subunit [Achromobacter piechaudii
            HLE]
 gi|400200192|gb|EJO33145.1| carbamoyl phosphate synthase large subunit [Achromobacter piechaudii
            HLE]
          Length = 1080

 Score = 1278 bits (3308), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 651/1091 (59%), Positives = 819/1091 (75%), Gaps = 28/1091 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTDL+ ILI+GAGPI+IGQACEFDYSG QACKALK EGY  IL+NSNPATIMTDP  AD
Sbjct: 3    KRTDLKSILIIGAGPIIIGQACEFDYSGAQACKALKAEGYRTILVNSNPATIMTDPETAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+T + VE+++E+E+PDALLPTMGGQTALN A+ LA  G L+K+ VELIGA   A
Sbjct: 63   VTYIEPITWQAVEKIIEREKPDALLPTMGGQTALNCALDLAHHGVLKKHNVELIGANEHA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECIS----IANEIGE--FPLIIRPAFTLG 261
            I+KAEDR  FKQAM  IG+++  SG+ +++DE       IA E+G   FP +IRP+FT+G
Sbjct: 123  IEKAEDRQKFKQAMTDIGLESAKSGVAHSMDEAWEVQRRIAAEVGTSGFPAVIRPSFTMG 182

Query: 262  GTGGGIAYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIE 321
            G+GGGIAYN EEFE IC+ GL AS TS++L+E+SLLGWKE+E+EV+RD ADN +I+CSIE
Sbjct: 183  GSGGGIAYNAEEFETICRRGLEASPTSELLIEESLLGWKEFEMEVVRDKADNCIIVCSIE 242

Query: 322  NVDPMGVHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEV 381
            N+DPMGVHTGDSITVAPAQTLTDKEYQ +R+ SIA++REIGV+ GGSNVQFAVNP DG +
Sbjct: 243  NLDPMGVHTGDSITVAPAQTLTDKEYQIMRNASIAVLREIGVDTGGSNVQFAVNPRDGRM 302

Query: 382  MVIEMNPRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITK-KTPASFEPSIDYV 440
            +VIEMNPRVSRSSALASKATGFPIAK+AA+L+VGY+LD++ N+IT   TPASFEPSIDYV
Sbjct: 303  IVIEMNPRVSRSSALASKATGFPIAKVAARLAVGYTLDELKNEITGGATPASFEPSIDYV 362

Query: 441  VTKIPRFAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVK 500
            VTK+PRFAFEKFP ++  LTTQMKSVGE MA+GRTFQESFQKALR LE G  G     + 
Sbjct: 363  VTKVPRFAFEKFPTADARLTTQMKSVGEVMAIGRTFQESFQKALRGLEVGVDG-----LN 417

Query: 501  ELDWDWEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQF 560
            +   D E+L+  L  P P+R+  +  A  +G  +DE+H ++ ID WFL+Q KE++D+E  
Sbjct: 418  QKTTDREKLQVELGEPGPERIWYVGDAFAQGFTLDEVHNITHIDPWFLSQIKEIVDIELA 477

Query: 561  LLTQSVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAE 620
            L  ++++++     +E+KRRGFSD+++AF   S E EVR+ R  L V P YKRVDTCAAE
Sbjct: 478  LEQKTLADLDYATLWELKRRGFSDRRLAFLLDSAESEVRKLRHQLNVRPVYKRVDTCAAE 537

Query: 621  FEANTPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYET 680
            F   T YMYS+Y+ ECESAPT +KK+++LGGGPNRIGQGIEFDYCC H + +L+  GYET
Sbjct: 538  FATRTAYMYSTYEEECESAPTDRKKIVVLGGGPNRIGQGIEFDYCCVHAALALREDGYET 597

Query: 681  IMMNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQ 740
            IM+N NPETVSTDYDTSDRLYFEPLT+EDVL ++  E P G+IVQ+GGQTPLKL+     
Sbjct: 598  IMVNCNPETVSTDYDTSDRLYFEPLTLEDVLEIVHKENPVGMIVQYGGQTPLKLA----- 652

Query: 741  YLDEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALA 800
                 R   A+G   V I GTSP+SID AEDRERF  ++ +L + QP    A++E +ALA
Sbjct: 653  -----RALEANG---VPIIGTSPESIDVAEDRERFQKLLNKLGLRQPPNRTARTEGEALA 704

Query: 801  IAKEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEID 860
             A EIGYP+VVRPSYVLGGRAMEIV+  + L  Y+  AV+V  + PVL+D++L++A E+D
Sbjct: 705  HATEIGYPLVVRPSYVLGGRAMEIVHEQQDLERYMREAVKVSNDSPVLLDRFLNNATEVD 764

Query: 861  VDALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNV 920
            VD LAD    V IGG+MEHIEQAGVHSGDSAC +P  ++S+  +  I   T  +AK LNV
Sbjct: 765  VDCLADG-ETVFIGGVMEHIEQAGVHSGDSACSLPPYSLSAEVIAEIKRQTTMMAKALNV 823

Query: 921  CGLMNCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTK 980
             GLMN Q+AI   GDVY+LE NPRASRTVP+VSKA G  LAK AA  M+G++L   G TK
Sbjct: 824  SGLMNVQFAI-QGGDVYVLEVNPRASRTVPYVSKATGLQLAKIAARAMAGQTLAAQGITK 882

Query: 981  EVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPL 1040
            EV+P + SVKEAV PF KF G D +LGPEM+STGEVMG+ MSF  AF K+Q+AAG +LP 
Sbjct: 883  EVVPPYFSVKEAVFPFVKFPGVDTILGPEMKSTGEVMGVGMSFGEAFVKSQLAAGVRLPD 942

Query: 1041 SGTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHA 1100
            SGTVF+S+ +  KP    +A+    +GFK+V+T GTA  +E  GI V+ V K+ EGRPH 
Sbjct: 943  SGTVFISVKNQDKPRAVEVARGLHALGFKLVATRGTAAEIEAAGIPVQVVNKVTEGRPHI 1002

Query: 1101 GDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSN 1160
             DMV NG+I +++ T        +D   +R + LA +V   TT++GA A  E ++ L+  
Sbjct: 1003 VDMVKNGEIALVINTVEERRNAIVDSRTIRTQSLAARVTFFTTIAGARAAVEGMQYLRQG 1062

Query: 1161 T-VTMTALQDF 1170
              + +  LQD 
Sbjct: 1063 LGLQVYPLQDL 1073


>gi|91775132|ref|YP_544888.1| carbamoyl-phosphate synthase large subunit [Methylobacillus
            flagellatus KT]
 gi|91709119|gb|ABE49047.1| carbamoyl-phosphate synthase large subunit [Methylobacillus
            flagellatus KT]
          Length = 1068

 Score = 1278 bits (3308), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 630/1065 (59%), Positives = 809/1065 (75%), Gaps = 23/1065 (2%)

Query: 86   LGKRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGL 145
            + KRTD++ ILI+GAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +
Sbjct: 1    MAKRTDIKSILIIGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPDM 60

Query: 146  ADRTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKL 205
            AD TYI P+T ++VE+++  ERPDALLPTMGGQTALN A+ LA+ G LEKY VELIGA  
Sbjct: 61   ADATYIEPVTWQMVEKIIAIERPDALLPTMGGQTALNCALDLAKHGVLEKYHVELIGASK 120

Query: 206  DAIKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGG 265
            +AI KAEDR+ FK AM  IG+ +  S + ++++E + +   IG +P IIRP+FT+GG+GG
Sbjct: 121  EAIDKAEDREKFKAAMTKIGLGSARSAVAHSMEEALQVQASIG-YPAIIRPSFTMGGSGG 179

Query: 266  GIAYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDP 325
            GIAYN+EEF  IC+ GL AS TS++L+E+SLLGWKEYE+EV+RD  DN +IICSIEN+DP
Sbjct: 180  GIAYNREEFMTICERGLEASPTSELLIEESLLGWKEYEMEVVRDSQDNCIIICSIENLDP 239

Query: 326  MGVHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIE 385
            MGVHTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGV+ GGSNVQFA+NP DG ++VIE
Sbjct: 240  MGVHTGDSITVAPAQTLTDKEYQIMRNASLAVLREIGVDTGGSNVQFAINPDDGRMIVIE 299

Query: 386  MNPRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITK-KTPASFEPSIDYVVTKI 444
            MNPRVSRSSALASKATGFPIAK+AAKL+VG++LD++ N+IT   TPASFEPSIDYVVTKI
Sbjct: 300  MNPRVSRSSALASKATGFPIAKVAAKLAVGFTLDELRNEITGGATPASFEPSIDYVVTKI 359

Query: 445  PRFAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDW 504
            PRFAFEKFP ++  LTTQMKSVGE MA+GRTFQESFQKALR LE G  G     + E   
Sbjct: 360  PRFAFEKFPQADSRLTTQMKSVGEVMAIGRTFQESFQKALRGLEVGADG-----LDEKTT 414

Query: 505  DWEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQ 564
            D ++++  L  P P+R+  +  A + G+ VD++ +LS ID+WFL Q +++I  EQ L  +
Sbjct: 415  DLDEIQKELGEPGPERIWFVGDAFRAGLSVDQVFDLSKIDRWFLVQIEDIIKREQALKGR 474

Query: 565  SVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEAN 624
             ++++ +D  +++KRRGFSDK++A    + +  VR  R +L V P YKRVDTCAAEF  +
Sbjct: 475  HLADLDRDALFQLKRRGFSDKRLAKLLGTDQHAVRAYRQALNVRPVYKRVDTCAAEFATD 534

Query: 625  TPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMN 684
            T YMYS+Y+ ECE+ PT K+K+++LGGGPNRIGQGIEFDYCC H +F+L+  GYETIM+N
Sbjct: 535  TAYMYSTYEEECEANPTSKRKIMVLGGGPNRIGQGIEFDYCCVHAAFALREDGYETIMVN 594

Query: 685  SNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDE 744
             NPETVSTDYDTSDRLYFEPLT+EDVL ++ LE+PEG+IVQ+GGQTPLKL+    + L++
Sbjct: 595  CNPETVSTDYDTSDRLYFEPLTLEDVLEIVALEKPEGVIVQYGGQTPLKLA----RDLEK 650

Query: 745  HRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKE 804
              +P         I GTSPD+ID AEDRERF  +++EL ++QP    A++  +A+ +A+E
Sbjct: 651  AGVP---------IIGTSPDAIDRAEDRERFQQMLQELDLKQPPNRTARTPEEAIRLAQE 701

Query: 805  IGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDAL 864
            IGYP+VVRPSYVLGGRAMEIV+    L  Y+  AV+V  E PVL+D++L+DA+E+DVDAL
Sbjct: 702  IGYPLVVRPSYVLGGRAMEIVHEQAQLERYMREAVKVSNESPVLLDRFLNDALEVDVDAL 761

Query: 865  ADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLM 924
            +D   +V+IGGIMEH+EQAGVHSGDSAC +P  ++S +  D +   T+K+AK L V GLM
Sbjct: 762  SDG-EDVIIGGIMEHVEQAGVHSGDSACSLPPYSLSPAMQDELREQTVKMAKALGVVGLM 820

Query: 925  NCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIP 984
            N Q+AI     VY+LE NPRASRTVPFVSKA G  LAK AA  M+G+ L   G T+EV+P
Sbjct: 821  NVQFAIQGE-TVYVLEVNPRASRTVPFVSKACGLQLAKIAARCMTGRKLKAQGVTREVVP 879

Query: 985  KHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTV 1044
             + SVKEAV PF KF G D +LGPEM+STGEVMG+  +F  AF K+Q+ +G KLP  G  
Sbjct: 880  PYYSVKEAVFPFIKFPGVDTILGPEMKSTGEVMGVGKTFAEAFVKSQLGSGTKLPKGGKA 939

Query: 1045 FLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMV 1104
            F+S+    +  +  IA+A   +GFK+V+T GTA  L   G++V  V K+ EGRPH  DM+
Sbjct: 940  FISVRREDRERVVEIAQALAGLGFKLVATRGTAGALTEAGLSVTPVNKVAEGRPHIVDMI 999

Query: 1105 ANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALA 1149
             NG+I  +V  +  D     D  ++RR  L  KV   TT++GA A
Sbjct: 1000 KNGEISFIVNVTE-DKRAVADSYEIRRSALQQKVTYYTTLAGAKA 1043


>gi|256830974|ref|YP_003159702.1| carbamoyl-phosphate synthase large subunit [Desulfomicrobium
            baculatum DSM 4028]
 gi|256580150|gb|ACU91286.1| carbamoyl-phosphate synthase, large subunit [Desulfomicrobium
            baculatum DSM 4028]
          Length = 1082

 Score = 1278 bits (3308), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 655/1091 (60%), Positives = 815/1091 (74%), Gaps = 25/1091 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTDL+KI+++G+GPIVIGQACEFDYSGTQA KALKEEGYEVIL+NSNPATIMTDP LAD
Sbjct: 3    KRTDLKKIMLIGSGPIVIGQACEFDYSGTQALKALKEEGYEVILVNSNPATIMTDPNLAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
            RTYI P+ PE V +++EKERP ALLPT+GGQT LN AVA+AE+G LEKYGVELIGA L +
Sbjct: 63   RTYIEPIEPETVARIIEKERPCALLPTLGGQTGLNTAVAVAENGVLEKYGVELIGASLPS 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            IKKAE R LF++AM+ IG+K P SGI  T D+      ++ +FP+I+RPA+TLGGTGGG+
Sbjct: 123  IKKAESRQLFRKAMENIGLKVPKSGIARTQDDVREWGEKL-KFPIIVRPAYTLGGTGGGV 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYNKE+ E I + GLAASLTS+V++E+SLLGWKEYELEV+RD  DN VIICSIEN+DPMG
Sbjct: 182  AYNKEDLERIAQQGLAASLTSEVMLEESLLGWKEYELEVVRDKKDNCVIICSIENLDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDS+TVAPAQTLTD EYQ++RD S+AI+REIGVE GGSNVQFA NP +G++M+IEMN
Sbjct: 242  VHTGDSVTVAPAQTLTDDEYQKMRDASLAIMREIGVETGGSNVQFAHNPANGDMMIIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRF 447
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT++T A+FEP+IDYVV KIPRF
Sbjct: 302  PRVSRSSALASKATGFPIAKIAAKLAVGYTLDELQNDITRETMAAFEPTIDYVVIKIPRF 361

Query: 448  AFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDWE 507
             FEKFPG+E  LTT MKSVGE MA+GRTF+E+ QK LRSLE G+ G G +   +L  D E
Sbjct: 362  TFEKFPGAEDFLTTAMKSVGETMAIGRTFKEALQKGLRSLETGYPGLGKTFDGQLP-DIE 420

Query: 508  QLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSVS 567
                 LR PN  R+  +  A+  G+  +EI E S ID WF+ QFK+++D E  L    + 
Sbjct: 421  DTLAGLRKPNSRRLYQLRDALLSGISEEEIFEASAIDPWFIRQFKDIVDFEAVLKNVGLQ 480

Query: 568  -NMTKD--DFY----EVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAE 620
             N++ D  DF     E K  GFSD+Q+A   K  E+++R  R   G+IPSYK VDTCAAE
Sbjct: 481  GNLSVDNPDFVTVLREAKAMGFSDRQLATIWKRGERDIRSMRKEAGIIPSYKLVDTCAAE 540

Query: 621  FEANTPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYET 680
            FEA TPY YS+Y+ E E+  + K+KV+ILGGGPNRIGQGIEFDYCC H S++L+  G E+
Sbjct: 541  FEAYTPYYYSTYETENEARVSDKRKVVILGGGPNRIGQGIEFDYCCVHASYALREMGIES 600

Query: 681  IMMNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQ 740
            IM+NSNPETVSTDYDTSDRLYFEPLT EDVL +I+ E+PEG+IVQFGGQTPL L++P+ +
Sbjct: 601  IMVNSNPETVSTDYDTSDRLYFEPLTREDVLAIIEQEKPEGVIVQFGGQTPLNLAVPLLR 660

Query: 741  YLDEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALA 800
                        +G V I GTSPDSID AEDRERF A++K+L + QP  G + S  +A+ 
Sbjct: 661  ------------EG-VPILGTSPDSIDRAEDRERFQALLKKLDLLQPNNGTSMSIEEAVI 707

Query: 801  IAKEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEID 860
            +A  IGYPVVVRPSYVLGGRAM+IVY ++ L TY E  V V P+ P+LIDK+L +AIEID
Sbjct: 708  VAARIGYPVVVRPSYVLGGRAMDIVYDEKDLRTYFEKHVTVVPDHPILIDKFLENAIEID 767

Query: 861  VDALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNV 920
            VDA++D   +  + GIMEHIE+AG+HSGDSAC++P  T+    +  I   T  LA  L V
Sbjct: 768  VDAVSDG-EDTYVAGIMEHIEEAGIHSGDSACVLPPHTLGKMWVQEIERQTKALASELGV 826

Query: 921  CGLMNCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTK 980
             GLMN Q+A+     +Y+LE NPRASRT PFVSKA G PLAK A  VM G+ L DL    
Sbjct: 827  VGLMNIQFALKDE-QIYILEVNPRASRTSPFVSKATGVPLAKLATRVMMGEKLADLKPWD 885

Query: 981  EVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPL 1040
                 + +VKEAVLPF +F G D LLGPEMRSTGEVMGID SF +AF KAQ+AAGQ LP 
Sbjct: 886  MRKGGYYAVKEAVLPFNRFPGVDALLGPEMRSTGEVMGIDPSFGLAFMKAQLAAGQFLPA 945

Query: 1041 SGTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHA 1100
            SG VF+S+ND  K  +   AK F  +GF I+ST GTA FL   G+  + V K++EGRP+ 
Sbjct: 946  SGCVFISVNDHDKSGIIVPAKTFQKLGFTIMSTRGTAAFLAGHGVDCQVVNKVYEGRPNV 1005

Query: 1101 GDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSN 1160
             D + NG IQ+++ TSSG    + D  +LRR  + Y +P  T ++ A A A AI+   ++
Sbjct: 1006 IDHIKNGDIQLVINTSSGKRTKE-DSSELRRTTVMYGLPYTTNLAAAKALAMAIKERSTS 1064

Query: 1161 TVTMTALQDFF 1171
             + +  LQ+++
Sbjct: 1065 GLDVKCLQEYY 1075


>gi|417854306|ref|ZP_12499621.1| carbamoyl phosphate synthase large subunit [Pasteurella multocida
            subsp. multocida str. Anand1_goat]
 gi|338218203|gb|EGP03992.1| carbamoyl phosphate synthase large subunit [Pasteurella multocida
            subsp. multocida str. Anand1_goat]
          Length = 1068

 Score = 1278 bits (3308), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 640/1084 (59%), Positives = 813/1084 (75%), Gaps = 24/1084 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILI+GAGPIVIGQACEFDYSG QACKAL+EEGY+V+L+NSNPATIMTDP +AD
Sbjct: 3    KRTDIKTILIIGAGPIVIGQACEFDYSGAQACKALREEGYKVVLVNSNPATIMTDPDMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+    VE+++EKERPDA+LPTMGGQTALN A+ L+++G L+KY VELIGAK DA
Sbjct: 63   VTYIEPIEWRTVEKIIEKERPDAILPTMGGQTALNCALDLSKNGVLKKYNVELIGAKEDA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  FK+AM+ IG+ TP S + +TL+E  +   E+G FP +IRP+FT+GG+GGGI
Sbjct: 123  IDKAEDRGRFKKAMEKIGLSTPKSFVCHTLEEAWAAQAEVG-FPTLIRPSFTMGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYNK+EF AIC+ G  AS T ++L+E+S+LGWKEYE+EV+RD ADN +I+CSIEN DPMG
Sbjct: 182  AYNKDEFYAICERGFDASPTHELLIEQSVLGWKEYEMEVVRDKADNCIIVCSIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ +R+ SIA++REIGV+ GGSNVQFA+NP +GE++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQIMRNASIAVLREIGVDTGGSNVQFAINPENGEMIVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKK-TPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+L+++ NDIT    PASFEPSIDYVVTK+PR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGYTLNELRNDITGGLIPASFEPSIDYVVTKVPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            FAFEKFP ++  LTTQMKSVGE MA+GRTFQES QKALR LE G  G+       +  + 
Sbjct: 362  FAFEKFPQADDRLTTQMKSVGEVMAMGRTFQESLQKALRGLETGICGFNL-----MSEEP 416

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
            E+++  L  P P R+  +  A   G  +DE+H  S ID WFL Q ++L+  E  L  +++
Sbjct: 417  EKIRQELGNPGPIRILYVADAFGAGFTLDEVHHYSKIDPWFLIQIQDLVLEELALEKRTL 476

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
             ++   +   +KR+GFSDK+IA  TKS E  VR KR+SL + P YKRVDTCA EF ++T 
Sbjct: 477  DDLDYAELRRLKRKGFSDKRIAQLTKSAESAVRNKRVSLNLHPVYKRVDTCAGEFTSDTA 536

Query: 627  YMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSN 686
            Y+YS+Y+ ECES P+ KKK++ILGGGPNRIGQGIEFDYCC H S +L+ AG+ETIM+N N
Sbjct: 537  YLYSTYEEECESRPSDKKKIMILGGGPNRIGQGIEFDYCCVHASLALREAGFETIMVNCN 596

Query: 687  PETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHR 746
            PETVSTD+DTSDRLYFEPLT+EDVL +I +E+P G+IV +GGQTPLKL+  +H       
Sbjct: 597  PETVSTDFDTSDRLYFEPLTLEDVLEIIHVEKPHGVIVHYGGQTPLKLANDLH------- 649

Query: 747  LPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEIG 806
               A+G   V I GTS DSIDAAEDRERF  I+ +L ++QP    A++  +A+ +A+E+G
Sbjct: 650  ---ANG---VNIIGTSADSIDAAEDRERFQQILHKLHLKQPTNRTARNAEEAVKLAEEVG 703

Query: 807  YPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALAD 866
            YP+VVRPSYVLGGRAM+IVY  E L  Y+  AV V  + P+L+D +L++AIE+DVD + D
Sbjct: 704  YPLVVRPSYVLGGRAMQIVYNVEELKRYMRKAVSVSNDSPILLDHFLNNAIEVDVDCICD 763

Query: 867  SCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNC 926
                VVIGGIM+HIEQAG+HSGDSAC +P  ++S    D I   T ++A  L V GLMN 
Sbjct: 764  G-AEVVIGGIMQHIEQAGIHSGDSACSLPPYSLSQDVQDEIRRQTAEMAFALGVKGLMNV 822

Query: 927  QYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPKH 986
            Q+A+   G +Y+LE NPRASRTVPFVSKA G PLAK AA VM+G+SL   G   EVIP  
Sbjct: 823  QFAV-QDGVIYVLEVNPRASRTVPFVSKATGRPLAKIAARVMAGESLKAQGIQGEVIPPF 881

Query: 987  VSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVFL 1046
             SVKEAV PF KF G D +LGPEMRSTGEVMG+  +F  AF KAQ+ A +++P +G VFL
Sbjct: 882  YSVKEAVFPFIKFPGVDTVLGPEMRSTGEVMGVGTTFAEAFLKAQLGANERIPKTGKVFL 941

Query: 1047 SLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVAN 1106
            S+ND  KP L  IA+   + G+ + +T GTA FL   G+AV+ + K+ EGRP+  D + N
Sbjct: 942  SVNDADKPRLLPIARQLQESGYGLCATLGTAKFLREHGVAVQIINKVREGRPNIVDAIKN 1001

Query: 1107 GQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTVTMTA 1166
            G+I M++ T SG +    DG  +RR  L  KV + TT++GA A A ++  L  + V   +
Sbjct: 1002 GEIAMVINTVSGLAETVTDGHAIRRSALQQKVFLQTTLAGAEALAGSVEYLADSEV--YS 1059

Query: 1167 LQDF 1170
            LQD 
Sbjct: 1060 LQDL 1063


>gi|451981961|ref|ZP_21930297.1| Carbamoyl-phosphate synthase, large subunit [Nitrospina gracilis
            3/211]
 gi|451760802|emb|CCQ91573.1| Carbamoyl-phosphate synthase, large subunit [Nitrospina gracilis
            3/211]
          Length = 1084

 Score = 1278 bits (3307), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 636/1091 (58%), Positives = 827/1091 (75%), Gaps = 24/1091 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTDL++I+I+GAGPI+IGQACEFDYSGTQACKALKEEGYEVIL+NSNPATIMTD   A 
Sbjct: 3    KRTDLKRIMIIGAGPIIIGQACEFDYSGTQACKALKEEGYEVILLNSNPATIMTDREFAH 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
            RTYI P+TP++VE+++ +ERPDALLPTMGGQT LN A+A AE G L++Y VE+IGA +  
Sbjct: 63   RTYIEPVTPDVVERIIARERPDALLPTMGGQTGLNTALAAAERGVLDRYEVEMIGANVQT 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR LFKQAM+ IG+++ PSG   ++ E   I    G FP IIRP+FTLGG+GGG+
Sbjct: 123  INKAEDRSLFKQAMEKIGLQSAPSGFATSILEAWDIVQGTG-FPAIIRPSFTLGGSGGGV 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            A  + EFE + K GL AS T  VL+EKSL+GWKEYELEVMRD+ DNVVI+CSIEN DPMG
Sbjct: 182  AETEAEFETLVKRGLYASPTHTVLIEKSLIGWKEYELEVMRDIRDNVVIVCSIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            +HTGDSITVAPAQTLTDKEYQ +R+ +I IIREIGVE GGSN+QF+++P  GE++VIEMN
Sbjct: 242  IHTGDSITVAPAQTLTDKEYQIMRNAAIDIIREIGVETGGSNIQFSIDPKTGEMIVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRF 447
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD+I NDIT++TPASFEP++DY V K+PRF
Sbjct: 302  PRVSRSSALASKATGFPIAKIAAKLAVGYTLDEIQNDITRETPASFEPTLDYCVVKVPRF 361

Query: 448  AFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGW--GCSNVKELDW- 504
             FEKF  + PLLTTQMKSVGEAM++GRTF+E+ QKALRSLE G  G      + +E+   
Sbjct: 362  TFEKFFKTPPLLTTQMKSVGEAMSIGRTFKEALQKALRSLEIGICGLEENFESKQEVQHQ 421

Query: 505  ---DWEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFL 561
               D E+LK  L +P+ DR+  + AA+++G+ +DEI+ L+ ID WFL    E+I+ E+ L
Sbjct: 422  PIEDHEELKKMLALPHWDRLWHVAAALRRGLSIDEIYGLTGIDPWFLHNMNEIIEFEKSL 481

Query: 562  LT-QSVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAE 620
                    + +    + K+ GFSD  +A   +  E ++  +R    + P YKRVDTC AE
Sbjct: 482  QRFNDCDALDESTLRQAKQYGFSDLYLARLLRCKEADISARRAEFNLFPVYKRVDTCGAE 541

Query: 621  FEANTPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYET 680
            FEA+TPY+YS+Y+ ECE+APT +KK++ILGGGPNRIGQGIEFDYCC H +F+L+  GYET
Sbjct: 542  FEAHTPYLYSTYEEECEAAPTDRKKIMILGGGPNRIGQGIEFDYCCVHAAFALKEDGYET 601

Query: 681  IMMNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQ 740
            IM+N NPETVSTDYDTSDRLYFEPLT+EDV++++ +E+P+G+IVQFGGQTPLKL++ + +
Sbjct: 602  IMVNCNPETVSTDYDTSDRLYFEPLTLEDVMHIVRVEKPDGVIVQFGGQTPLKLAVSLWE 661

Query: 741  YLDEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALA 800
                           V I GTSPD+ID AEDRERF A++ +L ++QP  G A S A+A  
Sbjct: 662  -------------AGVPIIGTSPDNIDRAEDRERFKAVLDKLGLKQPNNGTATSFAEAKK 708

Query: 801  IAKEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEID 860
            IA +IGYPVVVRPSYVLGGRAMEIVYT E+L  Y+++AV+  PE P+LID +L +A E+D
Sbjct: 709  IADDIGYPVVVRPSYVLGGRAMEIVYTQESLDRYMKHAVKASPEHPILIDDFLENATEVD 768

Query: 861  VDALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNV 920
            VDA++D   +VVIGG+MEHIE+AG+HSGDSAC +P  +I +  +D I + T  LA+ L V
Sbjct: 769  VDAISDGT-DVVIGGVMEHIEEAGIHSGDSACSLPPFSIQAEVIDEIKTQTRALARELQV 827

Query: 921  CGLMNCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTK 980
             GL+N Q+AI    D+++LE NPRASRTVPFVSKAIG PLAK AA VM+GKSL DL FT+
Sbjct: 828  IGLLNIQFAIKDK-DIFVLEVNPRASRTVPFVSKAIGIPLAKLAARVMAGKSLKDLNFTQ 886

Query: 981  EVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPL 1040
            E +  H++VKE+V PF KFQ  DVLLGPEM+STGEVMG+D SF  AFAK+QIA G  LPL
Sbjct: 887  EAVVPHIAVKESVFPFIKFQEVDVLLGPEMKSTGEVMGLDTSFGKAFAKSQIATGTPLPL 946

Query: 1041 SGTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHA 1100
             GTVF+S+ D  KP    + K   + G+++++T GTA +L+ +G  V  + K+ EG PH 
Sbjct: 947  KGTVFVSVKDADKPATVEVVKRLAEQGYRLLATKGTAKYLQDRGFEVTAISKVKEGSPHI 1006

Query: 1101 GDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSN 1160
             D + +G++  ++ T+ G+  +  D   LRR  LA  +P  TT+SGA A   A+++++ +
Sbjct: 1007 VDAIQDGEVDFVINTTFGEQ-EVKDSFSLRRASLAKNLPYFTTLSGAYALVGALKAIRES 1065

Query: 1161 TVTMTALQDFF 1171
            ++ + +LQ+++
Sbjct: 1066 SLDVCSLQEYW 1076


>gi|171915262|ref|ZP_02930732.1| carbamoyl-phosphate synthase large subunit [Verrucomicrobium spinosum
            DSM 4136]
          Length = 1089

 Score = 1278 bits (3307), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 637/1104 (57%), Positives = 812/1104 (73%), Gaps = 41/1104 (3%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            K T + KIL++G+GPIVIGQ CEFDYSG QACKAL+EEGYEV+L+NSNPATIMTDP  A 
Sbjct: 3    KDTSIHKILLIGSGPIVIGQGCEFDYSGVQACKALREEGYEVVLVNSNPATIMTDPEFAA 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
            RTY+ P+TPE+VE+++ KERPDALLPT+GGQTALN A++L +SG LEKY V +IGAK DA
Sbjct: 63   RTYVEPITPEVVEKIIAKERPDALLPTLGGQTALNTAMSLFKSGVLEKYNVRMIGAKADA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I+K EDR LFK AM  IG+  P SG+ + ++E   IA EIG +PLIIRPAFTLGG+GGGI
Sbjct: 123  IEKGEDRLLFKNAMLKIGLDLPQSGVAHKMEEATIIAEEIGTYPLIIRPAFTLGGSGGGI 182

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEFE I   G+  S  ++VL+E+SLLGWKE+E+EVMRD ADN V+ICSIEN+DPMG
Sbjct: 183  AYNREEFETIVARGIDMSPVNEVLIEESLLGWKEFEMEVMRDRADNCVVICSIENLDPMG 242

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAP QTLTD+EYQ +RD S A IREIGVE GGSN+QFAV+P  G ++VIEMN
Sbjct: 243  VHTGDSITVAPIQTLTDREYQIMRDASFACIREIGVETGGSNIQFAVHPTSGRMIVIEMN 302

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRF 447
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT++TPASFEP+IDYVVTK+PRF
Sbjct: 303  PRVSRSSALASKATGFPIAKIAAKLAVGYTLDELKNDITRETPASFEPTIDYVVTKVPRF 362

Query: 448  AFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLEC---GFSGWGCSNVKELDW 504
             FEKFPG++  LTTQMKSVGEAMA+GRTF+ES QKALRSLE    G  G G       + 
Sbjct: 363  TFEKFPGADTTLTTQMKSVGEAMAIGRTFKESLQKALRSLEIKRFGLLGDGADR----EV 418

Query: 505  DWEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQF---- 560
            D E L   L VPN +R+  +  A  +G  V+++  L+ ID+WFL Q +E++   Q     
Sbjct: 419  DDETLTTKLTVPNAERIFFLAQAFDRGWDVEKVFSLTQIDRWFLRQIQEIVHATQQISVN 478

Query: 561  -------------LLTQSVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGV 607
                         L  +  +++ +    ++K++GFSDKQ+A     TE+++R  R+  GV
Sbjct: 479  TSEHLFSQIPAAELTEERKASVLRASMLKLKKQGFSDKQLATQYGITEQQIRAGRIKYGV 538

Query: 608  IPSYKRVDTCAAEFEANTPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCC 667
            IP+Y+ VDTCAAEFEA TPY YS+Y  E E   + KKKVLILGGGPNRIGQGIEFDYCC 
Sbjct: 539  IPTYRLVDTCAAEFEAYTPYYYSTYGVENERRDSDKKKVLILGGGPNRIGQGIEFDYCCV 598

Query: 668  HTSFSLQSAGYETIMMNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFG 727
            H +F+ +  G+E IM+NSNPETVSTDYDTSD+LYFEPLT+EDVLN+ + E+P G+IVQFG
Sbjct: 599  HAAFAARELGFEAIMVNSNPETVSTDYDTSDKLYFEPLTLEDVLNICEQEKPWGVIVQFG 658

Query: 728  GQTPLKLSLPIHQYLDEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQP 787
            GQTPL L+             +      V I GTSP SI+ AEDR+ F A++ EL + Q 
Sbjct: 659  GQTPLNLA-------------AGLAAAGVPIIGTSPKSIELAEDRKLFAALLDELGLNQA 705

Query: 788  KGGIAKSEADALAIAKEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPV 847
              G A S  +ALAI   IGYP +VRPS+VLGGRAM+IVY+D  L+ Y++NAVE  PERPV
Sbjct: 706  PSGTAVSTEEALAITARIGYPSLVRPSFVLGGRAMQIVYSDAELIHYMQNAVEASPERPV 765

Query: 848  LIDKYLSDAIEIDVDALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTI 907
            L+D++L DA E+DVD ++D     V+G IMEHIE+AG+HSGDSAC+IP  +++      I
Sbjct: 766  LVDRFLEDATEVDVDCISDG-ETTVVGAIMEHIEEAGIHSGDSACVIPPFSLTKEMQVRI 824

Query: 908  SSWTIKLAKRLNVCGLMNCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALV 967
            +    KLA+ L+V GLMN Q A+    D+Y++E NPRASRTVPFVSKAIG PLAKYAA +
Sbjct: 825  TDAAKKLARALDVRGLMNMQLAV-KGDDLYVIEVNPRASRTVPFVSKAIGVPLAKYAAKI 883

Query: 968  MSGKSLNDLGFTKEVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAF 1027
            M G+ L DLGFT EV P H SVKEAV PF KF G D+ LGPEM+STGEVMGID    +AF
Sbjct: 884  MMGEKLKDLGFTTEVTPPHYSVKEAVFPFSKFPGVDITLGPEMKSTGEVMGIDPDLGMAF 943

Query: 1028 AKAQIAAGQKLPLSGTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAV 1087
            AK+Q+AAG  LP  G +F+S+ +  K  +  ++K + D+GF + +T GTA  LE +GI V
Sbjct: 944  AKSQMAAGGALPKGGNIFVSVKEADKASVAAVSKGYSDLGFVLYATPGTAQLLEAEGIPV 1003

Query: 1088 ERVLKMHEG-RPHAGDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSG 1146
            + + K+  G RP+  D++ N QIQ ++ T SG S  + D +K+R   +A ++P++TT+  
Sbjct: 1004 KVLPKLASGQRPNVLDLIKNKQIQFIINTPSGKS-PRADEIKIRTAAVANRIPIMTTLRA 1062

Query: 1147 ALANAEAIRSLKSNTVTMTALQDF 1170
            A A+  AI+SL++  + + ALQD+
Sbjct: 1063 ADASLRAIKSLQAADIEVRALQDY 1086


>gi|417851561|ref|ZP_12497286.1| carbamoyl phosphate synthase large subunit [Pasteurella multocida
            subsp. gallicida str. Anand1_poultry]
 gi|338219195|gb|EGP04884.1| carbamoyl phosphate synthase large subunit [Pasteurella multocida
            subsp. gallicida str. Anand1_poultry]
          Length = 1068

 Score = 1278 bits (3306), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 639/1084 (58%), Positives = 813/1084 (75%), Gaps = 24/1084 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILI+GAGPIVIGQACEFDYSG QACKAL+EEGY+V+L+NSNPATIMTDP +AD
Sbjct: 3    KRTDIKTILIIGAGPIVIGQACEFDYSGAQACKALREEGYKVVLVNSNPATIMTDPDMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+    VE+++EKERPDA+LPTMGGQTALN A+ L+++G L+KY VELIGAK DA
Sbjct: 63   VTYIEPIEWRTVEKIIEKERPDAILPTMGGQTALNCALDLSKNGVLKKYNVELIGAKEDA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  FK+AM+ IG+ TP S + +TL+E  +   E+G FP +IRP+FT+GG+GGGI
Sbjct: 123  IDKAEDRGRFKEAMEKIGLSTPKSFVCHTLEEAWAAQAEVG-FPTLIRPSFTMGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYNK+EF AIC+ G  AS T ++L+E+S+LGWKEYE+EV+RD ADN +I+CSIEN DPMG
Sbjct: 182  AYNKDEFYAICERGFDASPTHELLIEQSVLGWKEYEMEVVRDKADNCIIVCSIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ +R+ SIA++REIGV+ GGSNVQFA+NP +GE++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQIMRNASIAVLREIGVDTGGSNVQFAINPENGEMIVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKK-TPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+L+++ NDIT    PASFEPSIDYVVTK+PR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGYTLNELRNDITGGLIPASFEPSIDYVVTKVPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            FAFEKFP ++  LTTQMKSVGE MA+GRTFQES QKALR LE G  G+       +  + 
Sbjct: 362  FAFEKFPQADDRLTTQMKSVGEVMAMGRTFQESLQKALRGLETGICGFNL-----MSEEP 416

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
            E+++  L  P P R+  +  A   G  +DE+H  S ID WFL Q ++L+  E  L  +++
Sbjct: 417  EKIRQELGNPGPIRILYVADAFGAGFTLDEVHHYSKIDPWFLIQIQDLVLEELALEKRTL 476

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
             ++   +   +KR+GFSDK+IA  TKS E  VR KR+SL + P YKRVDTCA EF ++T 
Sbjct: 477  DDLDYAELRRLKRKGFSDKRIAQLTKSAESAVRNKRVSLNLHPVYKRVDTCAGEFTSDTA 536

Query: 627  YMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSN 686
            Y+YS+Y+ ECES P+ KKK++ILGGGPNRIGQGIEFDYCC H S +L+ AG+ETIM+N N
Sbjct: 537  YLYSTYEEECESRPSDKKKIMILGGGPNRIGQGIEFDYCCVHASLALREAGFETIMVNCN 596

Query: 687  PETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHR 746
            PETVSTD+DTSDRLYFEPLT+EDVL +I +E+P G+IV +GGQTPLKL+  +H       
Sbjct: 597  PETVSTDFDTSDRLYFEPLTLEDVLEIIHVEKPHGVIVHYGGQTPLKLANDLH------- 649

Query: 747  LPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEIG 806
               A+G   V I GTS DSIDAAEDRERF  I+ +L ++QP    A++  +A+ +A+E+G
Sbjct: 650  ---ANG---VNIIGTSADSIDAAEDRERFQQILHKLHLKQPTNRTARNAEEAVKLAEEVG 703

Query: 807  YPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALAD 866
            YP+VVRPSYVLGGRAM+IVY  + L  Y+  AV V  + P+L+D +L++AIE+DVD + D
Sbjct: 704  YPLVVRPSYVLGGRAMQIVYNVDELQRYMREAVSVSNDSPILLDHFLNNAIEVDVDCICD 763

Query: 867  SCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNC 926
                VVIGGIM+HIEQAG+HSGDSAC +P  ++S    D I   T ++A  L V GLMN 
Sbjct: 764  G-AEVVIGGIMQHIEQAGIHSGDSACSLPPYSLSQEVQDEIRRQTAEMAFTLGVKGLMNV 822

Query: 927  QYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPKH 986
            Q+A+   G +Y+LE NPRASRTVPFVSKA G PLAK AA VM+G+SL   G   EVIP  
Sbjct: 823  QFAV-QDGVIYVLEVNPRASRTVPFVSKATGRPLAKIAARVMAGESLKAQGIQGEVIPPF 881

Query: 987  VSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVFL 1046
             SVKEAV PF KF G D +LGPEMRSTGEVMG+  +F  AF KAQ+ A +++P +G VFL
Sbjct: 882  YSVKEAVFPFIKFPGVDTVLGPEMRSTGEVMGVGTTFAEAFLKAQLGANERIPKTGKVFL 941

Query: 1047 SLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVAN 1106
            S+ND  KP L  IA+   + G+ + +T GTA FL   G+AV+ + K+ EGRP+  D + N
Sbjct: 942  SVNDADKPRLLPIARQLQESGYGLCATLGTAKFLREHGVAVQIINKVREGRPNIVDAIKN 1001

Query: 1107 GQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTVTMTA 1166
            G+I M++ T SG +    DG  +RR  L  KV + TT++GA A A ++  L  + V   +
Sbjct: 1002 GEIAMVINTVSGLAETVTDGHAIRRSALQQKVFLQTTLAGAKALAGSVEYLADSEV--YS 1059

Query: 1167 LQDF 1170
            LQD 
Sbjct: 1060 LQDL 1063


>gi|33592551|ref|NP_880195.1| carbamoyl phosphate synthase large subunit [Bordetella pertussis
            Tohama I]
 gi|384203855|ref|YP_005589594.1| carbamoyl phosphate synthase large subunit [Bordetella pertussis CS]
 gi|408415088|ref|YP_006625795.1| carbamoyl-phosphate synthase large subunit [Bordetella pertussis
            18323]
 gi|33572197|emb|CAE41743.1| carbamoyl-phosphate synthase large chain [Bordetella pertussis Tohama
            I]
 gi|332381969|gb|AEE66816.1| carbamoyl phosphate synthase large subunit [Bordetella pertussis CS]
 gi|401777258|emb|CCJ62535.1| carbamoyl-phosphate synthase large chain [Bordetella pertussis 18323]
          Length = 1080

 Score = 1278 bits (3306), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 645/1078 (59%), Positives = 815/1078 (75%), Gaps = 27/1078 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTDL+ ILI+GAGPI+IGQACEFDYSG QACKALK EGY  IL+NSNPATIMTDP  AD
Sbjct: 3    KRTDLKSILIIGAGPIIIGQACEFDYSGAQACKALKAEGYRTILVNSNPATIMTDPETAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+T + VE+++E+E+PDALLPTMGGQTALN A+ LA  G L+K+ VELIGA   A
Sbjct: 63   VTYIEPITWQAVEKIIEREKPDALLPTMGGQTALNCALDLAHHGVLKKHNVELIGANEHA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECIS----IANEIGE--FPLIIRPAFTLG 261
            I+KAEDR  FKQAM  IG+++  SG+ +++DE       IA +IG   FP++IRP+FTLG
Sbjct: 123  IEKAEDRQKFKQAMTDIGLESAKSGVAHSMDEAWEVQRRIAADIGTAGFPVVIRPSFTLG 182

Query: 262  GTGGGIAYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIE 321
            G+GGGIAYN EEFE IC+ GL AS T ++L+E+SLLGWKE+E+EV+RD ADN +I+CSIE
Sbjct: 183  GSGGGIAYNAEEFEVICRRGLEASPTKELLIEESLLGWKEFEMEVVRDKADNCIIVCSIE 242

Query: 322  NVDPMGVHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEV 381
            N+DPMGVHTGDSITVAPAQTLTDKEYQ +R+ SIA++REIGV+ GGSNVQFAVNP +G +
Sbjct: 243  NLDPMGVHTGDSITVAPAQTLTDKEYQIMRNASIAVLREIGVDTGGSNVQFAVNPQNGRM 302

Query: 382  MVIEMNPRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITK-KTPASFEPSIDYV 440
            +VIEMNPRVSRSSALASKATGFPIAK+AA+L+VGY+LD++ N+IT   TPASFEP+IDYV
Sbjct: 303  IVIEMNPRVSRSSALASKATGFPIAKVAARLAVGYTLDELRNEITGGATPASFEPTIDYV 362

Query: 441  VTKIPRFAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVK 500
            VTK+PRFAFEKFP ++  LTTQMKSVGE MA+GRTFQESFQKALR LE G  G     + 
Sbjct: 363  VTKVPRFAFEKFPQADARLTTQMKSVGEVMAMGRTFQESFQKALRGLEVGVDG-----LN 417

Query: 501  ELDWDWEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQF 560
            +   D E+L+  L  P P+R+  +  A  +G  +DE+H L+ ID WFL Q KE++D+E  
Sbjct: 418  QKTTDREKLQIELGEPGPERIWYVGDAFAQGFTLDEVHGLTRIDPWFLAQIKEIVDIELA 477

Query: 561  LLTQSVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAE 620
            L  ++++++     +E+KRRGFSD+++AF   S+E EVR+ R  L V P YKRVDTCAAE
Sbjct: 478  LEQKTLADLDYATLWELKRRGFSDRRLAFLLDSSESEVRKLRHQLNVRPVYKRVDTCAAE 537

Query: 621  FEANTPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYET 680
            F  NT YMYS+Y+ ECES PT +KK+++LGGGPNRIGQGIEFDYCC H + +L+  GYET
Sbjct: 538  FATNTAYMYSTYEEECESQPTDRKKIIVLGGGPNRIGQGIEFDYCCVHAALALREDGYET 597

Query: 681  IMMNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQ 740
            IM+N NPETVSTDYDTSDRLYFEPLT+EDVL ++  E P G+IVQ+GGQTPLKL+     
Sbjct: 598  IMVNCNPETVSTDYDTSDRLYFEPLTLEDVLEIVHKENPVGMIVQYGGQTPLKLA----- 652

Query: 741  YLDEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALA 800
                 R   A+G   V I GTSP+SID AEDRERF  ++ +L + QP    A++EA+ALA
Sbjct: 653  -----RALEANG---VSIIGTSPESIDVAEDRERFQKLLNKLGLRQPPNRTARTEAEALA 704

Query: 801  IAKEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEID 860
             A EIGYP+VVRPSYVLGGRAMEIV+  + L  Y+  AV+V  + PVL+D++L+DA E+D
Sbjct: 705  HASEIGYPLVVRPSYVLGGRAMEIVHEQQDLERYMREAVKVSNDSPVLLDRFLNDATEVD 764

Query: 861  VDALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNV 920
            VD LAD    V IGG+MEHIEQAGVHSGDSAC +P  ++S+  +  I   T  +AK LNV
Sbjct: 765  VDCLADG-QTVFIGGVMEHIEQAGVHSGDSACSLPPYSLSAEVIAEIKRQTTMMAKALNV 823

Query: 921  CGLMNCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTK 980
             GLMN Q+AI   GDVY+LE NPRASRTVP+VSKA G  LAK AA  M+G++L D G T+
Sbjct: 824  SGLMNVQFAI-QGGDVYVLEVNPRASRTVPYVSKATGLQLAKIAARAMAGRTLADQGITR 882

Query: 981  EVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPL 1040
            EV+P + SVKEAV PF KF G D +LGPEM+STGEVMG+  SF  AF K+Q+AAG +LP 
Sbjct: 883  EVVPPYFSVKEAVFPFVKFPGVDTILGPEMKSTGEVMGVGNSFGEAFVKSQLAAGVRLPD 942

Query: 1041 SGTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHA 1100
            SGTVF+S+ +  KP    +A+   ++GFK+V+T GTA  +E  GI V+ V K+ EGRPH 
Sbjct: 943  SGTVFISVRNQDKPRAVEVARGLHNLGFKLVATRGTAAEIEAAGIPVQVVNKVTEGRPHI 1002

Query: 1101 GDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLK 1158
             DMV NG++ +++ T         D   +R + LA ++   TT++GA A  E ++ ++
Sbjct: 1003 VDMVKNGEVSLVINTVEERRNAIADSRTIRTQALANRITFFTTIAGARAAVEGMQFMR 1060


>gi|423013436|ref|ZP_17004157.1| carbamoyl phosphate synthase large subunit [Achromobacter
            xylosoxidans AXX-A]
 gi|338783591|gb|EGP47955.1| carbamoyl phosphate synthase large subunit [Achromobacter
            xylosoxidans AXX-A]
          Length = 1080

 Score = 1278 bits (3306), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 647/1078 (60%), Positives = 816/1078 (75%), Gaps = 27/1078 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTDL+ ILI+GAGPI+IGQACEFDYSG QACKALK EGY  IL+NSNPATIMTDP  AD
Sbjct: 3    KRTDLKSILIIGAGPIIIGQACEFDYSGAQACKALKAEGYRTILVNSNPATIMTDPETAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+T + VE+++E+E+PDALLPTMGGQTALN A+ LA  G L+K+ VELIGA   A
Sbjct: 63   VTYIEPITWQAVEKIIEREKPDALLPTMGGQTALNCALDLAHHGVLKKHNVELIGANEHA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECIS----IANEIGE--FPLIIRPAFTLG 261
            I+KAEDR  FKQAM  IG+++  SG+ +++DE       IA E+G   FP +IRP+FT+G
Sbjct: 123  IEKAEDRQKFKQAMTDIGLESAKSGVAHSMDEAWEVQRRIAAEVGTSGFPAVIRPSFTMG 182

Query: 262  GTGGGIAYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIE 321
            G+GGGIAYN EEFE IC+ GL AS TS++L+E+SLLGWKE+E+EV+RD ADN +I+CSIE
Sbjct: 183  GSGGGIAYNAEEFETICRRGLEASPTSELLIEESLLGWKEFEMEVVRDKADNCIIVCSIE 242

Query: 322  NVDPMGVHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEV 381
            N+DPMGVHTGDSITVAPAQTLTDKEYQ +R+ SIA++REIGV+ GGSNVQFAVNP +G +
Sbjct: 243  NLDPMGVHTGDSITVAPAQTLTDKEYQIMRNASIAVLREIGVDTGGSNVQFAVNPENGRM 302

Query: 382  MVIEMNPRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITK-KTPASFEPSIDYV 440
            +VIEMNPRVSRSSALASKATGFPIAK+AA+L+VGY+LD++ N+IT   TPASFEPSIDYV
Sbjct: 303  IVIEMNPRVSRSSALASKATGFPIAKVAARLAVGYTLDELKNEITGGATPASFEPSIDYV 362

Query: 441  VTKIPRFAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVK 500
            VTK+PRFAFEKFP ++  LTTQMKSVGE MA+GRTFQESFQKALR LE G  G     + 
Sbjct: 363  VTKVPRFAFEKFPTADARLTTQMKSVGEVMAIGRTFQESFQKALRGLEVGVDG-----LN 417

Query: 501  ELDWDWEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQF 560
            +   D E+L+  L  P P+R+  +  A  +G  +DE+H+++ ID WFL+Q KE++D+E  
Sbjct: 418  QKTTDREKLQVELGEPGPERIWYVGDAFAQGFTLDEVHDITHIDPWFLSQIKEIVDIELA 477

Query: 561  LLTQSVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAE 620
            L  +++S++     +E+KRRGFSD+++AF   + E EVR+ R  L V P YKRVDTCAAE
Sbjct: 478  LEQKTLSDLDYATLWELKRRGFSDRRLAFLLDTVESEVRKLRHQLNVRPVYKRVDTCAAE 537

Query: 621  FEANTPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYET 680
            F   T YMYS+Y+ ECE+APT +KK+++LGGGPNRIGQGIEFDYCC H + +L+  GYET
Sbjct: 538  FATRTAYMYSTYEEECEAAPTDRKKIVVLGGGPNRIGQGIEFDYCCVHAALALRDDGYET 597

Query: 681  IMMNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQ 740
            IM+N NPETVSTDYDTSDRLYFEPLT+EDVL ++  E P G+IVQ+GGQTPLKL+     
Sbjct: 598  IMVNCNPETVSTDYDTSDRLYFEPLTLEDVLEIVHKENPVGMIVQYGGQTPLKLA----- 652

Query: 741  YLDEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALA 800
                 R   A+G   V I GTSP+SID AEDRERF  ++ +L + QP    A++EA+ALA
Sbjct: 653  -----RALEANG---VPIIGTSPESIDIAEDRERFQKLLNKLGLRQPPNRTARTEAEALA 704

Query: 801  IAKEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEID 860
             A EIGYP+VVRPSYVLGGRAMEIV+  + L  Y+  AV+V  + PVL+D++L++A E+D
Sbjct: 705  HATEIGYPLVVRPSYVLGGRAMEIVHEQQDLERYMREAVKVSNDSPVLLDRFLNNATEVD 764

Query: 861  VDALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNV 920
            VD LAD    V IGG+MEHIEQAGVHSGDSAC +P  ++S+  +  I   T  +AK LNV
Sbjct: 765  VDCLADG-ETVFIGGVMEHIEQAGVHSGDSACSLPPYSLSADVIAEIKRQTGMMAKALNV 823

Query: 921  CGLMNCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTK 980
             GLMN Q+AI   GDVY+LE NPRASRTVP+VSKA G  LAK AA  M+G++L   G TK
Sbjct: 824  SGLMNVQFAI-QGGDVYVLEVNPRASRTVPYVSKATGLQLAKIAARAMAGQTLAAQGITK 882

Query: 981  EVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPL 1040
            EV+P + SVKEAV PF KF G D +LGPEM+STGEVMG+  SF  AF K+Q+AAG +LP 
Sbjct: 883  EVVPPYFSVKEAVFPFVKFPGVDTILGPEMKSTGEVMGVGTSFGEAFVKSQLAAGVRLPE 942

Query: 1041 SGTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHA 1100
            SGTVF+S+ +  KP    +A+    +GFK+V+T GTA  +E  GI V+RV K+ EGRPH 
Sbjct: 943  SGTVFISVKNQDKPRAVEVARGLHALGFKLVATRGTAAEIEAAGIPVQRVNKVTEGRPHI 1002

Query: 1101 GDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLK 1158
             DMV NG+I +++ T        +D   +R + LA +V   TT++GA A  E ++ L+
Sbjct: 1003 VDMVKNGEISLVINTVEERRNAIVDSRTIRTQSLAARVTFFTTIAGARAAVEGMQYLR 1060


>gi|52308343|gb|AAU38843.1| CarB protein [Mannheimia succiniciproducens MBEL55E]
          Length = 1100

 Score = 1277 bits (3305), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 626/1084 (57%), Positives = 817/1084 (75%), Gaps = 23/1084 (2%)

Query: 81   SKDQKLGKRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIM 140
            S++  + KR D+  ILI+GAGPIVIGQACEFDYSG QACKAL+EEGY+V+L+NSNPATIM
Sbjct: 26   SRENNMPKRNDINTILIIGAGPIVIGQACEFDYSGAQACKALREEGYKVVLVNSNPATIM 85

Query: 141  TDPGLADRTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVEL 200
            TDP +AD TYI P+  + VE+++EKERPDA+LPTMGGQTALN A+ L+++G L+KYGVEL
Sbjct: 86   TDPNMADVTYIEPIHWQTVEKIIEKERPDAILPTMGGQTALNCALDLSKNGVLKKYGVEL 145

Query: 201  IGAKLDAIKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTL 260
            IGA  DAI KAEDR  FK+AM  IG+ TP S + ++ DE      E+G FP +IRP+FT+
Sbjct: 146  IGATEDAIDKAEDRGRFKEAMAKIGLNTPKSFVCHSFDEAWKAQEEVG-FPTLIRPSFTM 204

Query: 261  GGTGGGIAYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSI 320
            GG+GGGIAYN++EF+AIC+ G  AS T ++L+E+S+LGWKEYE+EV+RD ADN +I+CSI
Sbjct: 205  GGSGGGIAYNRDEFQAICERGFEASPTHELLIEQSVLGWKEYEMEVVRDKADNCIIVCSI 264

Query: 321  ENVDPMGVHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGE 380
            EN DPMGVHTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGV+ GGSNVQFA+NP +GE
Sbjct: 265  ENFDPMGVHTGDSITVAPAQTLTDKEYQIMRNASLAVLREIGVDTGGSNVQFAINPENGE 324

Query: 381  VMVIEMNPRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKK-TPASFEPSIDY 439
            ++VIEMNPRVSRSSALASKATGFPIAK+AAKL+VGY+L+++ NDIT    PASFEPSIDY
Sbjct: 325  MIVIEMNPRVSRSSALASKATGFPIAKVAAKLAVGYTLNELRNDITGGLIPASFEPSIDY 384

Query: 440  VVTKIPRFAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNV 499
            VVTK+PRFAFEKFP ++  LTTQMKSVGE MA+GRTFQES QKALR LE G  G+   N+
Sbjct: 385  VVTKVPRFAFEKFPKADDRLTTQMKSVGEVMAMGRTFQESIQKALRGLETGICGF---NL 441

Query: 500  KELDWDWEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQ 559
            K    D E+L++ +  P P+R+  +  A   G  ++++H  S ID WFL Q ++L+  E 
Sbjct: 442  KT--EDMEKLRHEISNPGPERLLYVADAFGIGWSIEDVHHYSKIDPWFLIQIQDLVLEEL 499

Query: 560  FLLTQSVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAA 619
             L  ++++++ KD+ Y +KR+GFSDK+IA   KS E  VR  R +  + P YKRVDTCA 
Sbjct: 500  ALEKKTLADLNKDEIYRLKRKGFSDKRIAQLVKSDETSVRSLRNAFNIHPVYKRVDTCAG 559

Query: 620  EFEANTPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYE 679
            EF+++T Y+YS+Y+ ECE+AP+ +KKV+ILGGGPNRIGQGIEFDYCC H + +L+ +G+E
Sbjct: 560  EFKSDTAYLYSTYEEECEAAPSDRKKVMILGGGPNRIGQGIEFDYCCVHAALALRESGFE 619

Query: 680  TIMMNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIH 739
            TIM+N NPETVSTD+DTSDRLYFEPLT+EDVL +I +E+P G+IV +GGQTPLKL+  +H
Sbjct: 620  TIMVNCNPETVSTDFDTSDRLYFEPLTLEDVLEIIHVEKPWGVIVHYGGQTPLKLANALH 679

Query: 740  QYLDEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADAL 799
                      A+G   V I GTS DSIDAAEDRERF  I+ +L+++QP    A++  +A+
Sbjct: 680  ----------ANG---VNIIGTSADSIDAAEDRERFQKILHDLNLKQPANRTARNTQEAV 726

Query: 800  AIAKEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEI 859
             +A E+GYP+VVRPSYVLGGRAM+IVY DE L  Y+  AV V  + P+L+D +L++AIE+
Sbjct: 727  GLANEVGYPLVVRPSYVLGGRAMQIVYNDEELNRYMREAVSVSNDSPILLDHFLNNAIEV 786

Query: 860  DVDALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLN 919
            DVD + D    V+IGGIM+HIEQAG+HSGDSAC +P  ++S    D I   T  +A+ LN
Sbjct: 787  DVDCICDG-EQVIIGGIMQHIEQAGIHSGDSACSLPPYSLSMEIQDEIRRQTAAMARALN 845

Query: 920  VCGLMNCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFT 979
            V GLMN Q+A+     +Y+LE NPRASRTVPFVSKA G PLAK AA VM+G SL + G  
Sbjct: 846  VVGLMNVQFAVQNDV-IYVLEVNPRASRTVPFVSKATGQPLAKIAARVMAGISLKEQGIQ 904

Query: 980  KEVIPKHV-SVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKL 1038
             EV+P+   +VKEAV PF KF G D +LGPEMRSTGEVMG+  +F  AF KAQI AG+++
Sbjct: 905  GEVVPQDFYAVKEAVFPFIKFPGVDTILGPEMRSTGEVMGVGATFAEAFLKAQIGAGERI 964

Query: 1039 PLSGTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRP 1098
            P +G VF+S+++  KP L  I K   + G+ + +T GTA FL   GIAV+ V K+ EGRP
Sbjct: 965  PRTGKVFVSVDNNDKPRLLPIVKRLQEQGYGLCATFGTAKFLRENGIAVQTVNKVREGRP 1024

Query: 1099 HAGDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLK 1158
            H  D + N +I +++ T+ G +    D   +R   L  +VP+ TT++GA A + ++ +L 
Sbjct: 1025 HIVDAIKNDEIALIINTAGGMAESVADSASIRASALKQRVPLYTTIAGADAISLSVANLD 1084

Query: 1159 SNTV 1162
             + V
Sbjct: 1085 IHDV 1088


>gi|167855248|ref|ZP_02478017.1| carbamoyl-phosphate synthase large subunit [Haemophilus parasuis
            29755]
 gi|167853612|gb|EDS24857.1| carbamoyl-phosphate synthase large subunit [Haemophilus parasuis
            29755]
          Length = 1066

 Score = 1277 bits (3305), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 626/1072 (58%), Positives = 810/1072 (75%), Gaps = 22/1072 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD+  ILI+GAGPIVIGQACEFDYSG QACKAL+EEGY+V+L+NSNPATIMTDP +AD
Sbjct: 3    KRTDINTILIIGAGPIVIGQACEFDYSGAQACKALREEGYKVVLVNSNPATIMTDPNMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+    V +++EKERPDA+LPTMGGQTALN A+ L+ +G L+++ VELIGA  DA
Sbjct: 63   VTYIEPIEWRTVAKIIEKERPDAILPTMGGQTALNCALDLSRNGVLKQFNVELIGASEDA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  FKQAM+ IG+  P S I +TL+E +     +G FP +IRP+FT+GG+GGGI
Sbjct: 123  IDKAEDRGRFKQAMEKIGLSCPKSFIAHTLEEALKAQEAVG-FPTLIRPSFTMGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN++EF AIC+ G  AS T ++L+E+S+LGWKEYE+EV+RD  DN +I+CSIEN DPMG
Sbjct: 182  AYNRDEFLAICERGFEASPTHELLIEQSVLGWKEYEMEVVRDKEDNCIIVCSIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGV+ GGSNVQFA+NP +GE++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQIMRNASLAVLREIGVDTGGSNVQFAINPENGEMIVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKK-TPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+L+++ NDIT    PASFEP++DYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGYTLNELRNDITGGLIPASFEPTLDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            FAFEKF  ++  LTTQMKSVGE MA+GRTFQES QKALR LE G  G+       L  + 
Sbjct: 362  FAFEKFANADDRLTTQMKSVGEVMAMGRTFQESLQKALRGLETGICGFNL-----LSEEP 416

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
            E+++  L  P P+R+  +  A   G  +DE+H  S ID WFL Q ++L+  E  L  + +
Sbjct: 417  EKIRRELANPGPNRILYVADAFGAGFSLDEVHHYSKIDPWFLIQIQDLVQEELALEKKQL 476

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
            S++ +++   +KR+GFSDK+IA  TK +EK VR+ R +LG++P YKRVDTCAAEF ++T 
Sbjct: 477  SDLDREELRRLKRKGFSDKRIAQLTKVSEKAVRDYRHTLGILPVYKRVDTCAAEFASDTA 536

Query: 627  YMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSN 686
            Y+YS+Y+ ECE+ P+ +KKV+ILGGGPNRIGQGIEFDYCC H S +L+ AGYETIM+N N
Sbjct: 537  YLYSTYEEECEANPSDRKKVMILGGGPNRIGQGIEFDYCCVHASLALREAGYETIMVNCN 596

Query: 687  PETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHR 746
            PETVSTD+DTSDRLYFEPLT+EDVL V+ +E+P G+IV +GGQTPLKL+  +++      
Sbjct: 597  PETVSTDFDTSDRLYFEPLTLEDVLEVVRVEKPWGVIVHYGGQTPLKLANALYE------ 650

Query: 747  LPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEIG 806
                  +G V I GTS DSIDAAEDRERF  I+ +L+++QP    A++  +A+A+A E+G
Sbjct: 651  ------NG-VNIIGTSADSIDAAEDRERFQKILHDLNLKQPANRTARNAQEAVALANEVG 703

Query: 807  YPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALAD 866
            YP+VVRPSYVLGGRAM+IVY DE L  Y+  AV V  + P+L+D +L++AIE+DVD + D
Sbjct: 704  YPLVVRPSYVLGGRAMQIVYNDEELNKYMREAVSVSNDSPILLDHFLNNAIEVDVDCICD 763

Query: 867  SCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNC 926
               N+VIGGIM+H+EQAG+HSGDSAC +P  ++S   LD I   T ++A  L V GLMN 
Sbjct: 764  G-ENMVIGGIMQHVEQAGIHSGDSACSLPAYSLSGEILDEIRRQTKEMAFALGVKGLMNV 822

Query: 927  QYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPKH 986
            Q+A+     VY+LE NPRASRTVPFVSKA G PLAK AA VM+G+SL +L   +EVIP+ 
Sbjct: 823  QFAVQNDV-VYVLEVNPRASRTVPFVSKATGQPLAKIAARVMAGESLAELNALEEVIPQK 881

Query: 987  VSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVFL 1046
              VKEAV PF KF G D +LGPEMRSTGEVMG+  +F  AF KAQ+ AG+++P +G VFL
Sbjct: 882  YFVKEAVFPFIKFPGVDTILGPEMRSTGEVMGVGETFAEAFFKAQLGAGERIPRTGKVFL 941

Query: 1047 SLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVAN 1106
            S+++  KP L  +AK   + G+ + +T GTA FL   G+A + V K+ EGRPH  D + N
Sbjct: 942  SVDNNDKPRLLDVAKRLQEQGYGLCATLGTAKFLRENGVAAQIVNKVREGRPHIVDAIKN 1001

Query: 1107 GQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLK 1158
            G+I M++ T +G+     D   +RR  L  +VPV TT++GA A + A+  + 
Sbjct: 1002 GEIAMVINTVNGEPEVIADSHSIRRTALQQRVPVYTTIAGADAISYAVEHIN 1053


>gi|421264260|ref|ZP_15715259.1| carbamoyl phosphate synthase large subunit [Pasteurella multocida
            subsp. multocida str. P52VAC]
 gi|401688486|gb|EJS84069.1| carbamoyl phosphate synthase large subunit [Pasteurella multocida
            subsp. multocida str. P52VAC]
          Length = 1068

 Score = 1277 bits (3304), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 639/1084 (58%), Positives = 813/1084 (75%), Gaps = 24/1084 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILI+GAGPIVIGQACEFDYSG QACKAL+EEGY+V+L+NSNPATIMTDP +AD
Sbjct: 3    KRTDIKTILIIGAGPIVIGQACEFDYSGAQACKALREEGYKVVLVNSNPATIMTDPDMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+    VE+++EKERPDA+LPTMGGQTALN A+ L+++G L+KY VELIGAK DA
Sbjct: 63   VTYIEPIEWRTVEKIIEKERPDAILPTMGGQTALNCALDLSKNGVLKKYNVELIGAKEDA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  FK+AM+ IG+ TP S + +TL+E  +   E+G FP +IRP+FT+GG+GGGI
Sbjct: 123  IDKAEDRGRFKEAMEKIGLSTPKSFVCHTLEEAWAAQAEVG-FPTLIRPSFTMGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYNK+EF AIC+ G  AS T ++L+E+S+LGWKEYE+EV+RD ADN +I+CSIEN DPMG
Sbjct: 182  AYNKDEFYAICERGFDASPTHELLIEQSVLGWKEYEMEVVRDKADNCIIVCSIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ +R+ SIA++REIGV+ GGSNVQFA+NP +GE++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQIMRNASIAVLREIGVDTGGSNVQFAINPENGEMIVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKK-TPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+L+++ NDIT    PASFEPSIDYVVTK+PR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGYTLNELRNDITGGLIPASFEPSIDYVVTKVPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            FAFEKFP ++  LTTQMKSVGE MA+GRTFQES QKALR LE G  G+       +  + 
Sbjct: 362  FAFEKFPQADDRLTTQMKSVGEVMAMGRTFQESLQKALRGLETGICGFNL-----MSEEP 416

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
            E+++  L  P P R+  +  A   G  +DE+H  S ID WFL Q ++L+  E  L  +++
Sbjct: 417  EKIRQELGNPGPIRILYVADAFGAGFTLDEVHHYSKIDPWFLIQIQDLVLEELALEKRTL 476

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
             ++   +   +KR+GFSDK+IA  TKS E  VR KR+SL + P YKRVDTCA EF ++T 
Sbjct: 477  DDLDYAELRRLKRKGFSDKRIAQLTKSAESAVRNKRVSLNLHPVYKRVDTCAGEFTSDTA 536

Query: 627  YMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSN 686
            Y+YS+Y+ ECES P+ KKK++ILGGGPNRIGQGIEFDYCC H S +L+ AG+ETIM+N N
Sbjct: 537  YLYSTYEEECESRPSDKKKIMILGGGPNRIGQGIEFDYCCVHASLALREAGFETIMVNCN 596

Query: 687  PETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHR 746
            PETVSTD+DTSDRLYFEPLT+EDVL +I +E+P G+IV +GGQTPLKL+  +H       
Sbjct: 597  PETVSTDFDTSDRLYFEPLTLEDVLEIIHVEKPHGVIVHYGGQTPLKLANDLH------- 649

Query: 747  LPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEIG 806
               A+G   V I GTS DSIDAAEDRERF  I+ +L ++QP    A++  +A+ +A+E+G
Sbjct: 650  ---ANG---VNIIGTSADSIDAAEDRERFQQILHKLHLKQPTNRTARNAEEAVKLAEEVG 703

Query: 807  YPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALAD 866
            YP+VVRPSYVLGGRAM+IVY  + L  Y+  AV V  + P+L+D +L++AIE+DVD + D
Sbjct: 704  YPLVVRPSYVLGGRAMQIVYNVDELQRYMREAVSVSNDSPILLDHFLNNAIEVDVDCICD 763

Query: 867  SCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNC 926
                VVIGGIM+HIEQAG+HSGDSAC +P  ++S    D I   T ++A  L V GLMN 
Sbjct: 764  G-AEVVIGGIMQHIEQAGIHSGDSACSLPPYSLSQEVQDEIRRQTAEMAFALGVKGLMNV 822

Query: 927  QYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPKH 986
            Q+A+   G +Y+LE NPRASRTVPFVSKA G PLAK AA VM+G+SL   G   EVIP  
Sbjct: 823  QFAV-QDGVIYVLEVNPRASRTVPFVSKATGRPLAKIAARVMAGESLKAQGIQGEVIPPF 881

Query: 987  VSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVFL 1046
             SVKEAV PF KF G D +LGPEMRSTGEVMG+  +F  AF KAQ+ A +++P +G VFL
Sbjct: 882  YSVKEAVFPFIKFPGVDTVLGPEMRSTGEVMGVGTTFAEAFLKAQLGANERIPKTGKVFL 941

Query: 1047 SLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVAN 1106
            S+ND  KP L  IA+   + G+ + +T GTA FL   G+AV+ + K+ EGRP+  D + N
Sbjct: 942  SVNDADKPRLLPIARQLQESGYGLCATLGTAKFLREHGVAVQIINKVREGRPNIVDAIKN 1001

Query: 1107 GQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTVTMTA 1166
            G+I M++ T SG +    DG  +RR  L  KV + TT++GA A A ++  L  + V   +
Sbjct: 1002 GEIAMVINTVSGLAETVTDGHAIRRSALQQKVFLQTTLAGAEALAGSVEYLADSEV--YS 1059

Query: 1167 LQDF 1170
            LQD 
Sbjct: 1060 LQDL 1063


>gi|15603370|ref|NP_246444.1| carbamoyl phosphate synthase large subunit [Pasteurella multocida
            subsp. multocida str. Pm70]
 gi|378775357|ref|YP_005177600.1| carbamoyl-phosphate synthase large subunit [Pasteurella multocida
            36950]
 gi|425066388|ref|ZP_18469508.1| Carbamoyl-phosphate synthase large chain [Pasteurella multocida
            subsp. gallicida P1059]
 gi|22095528|sp|Q9CKV0.1|CARB_PASMU RecName: Full=Carbamoyl-phosphate synthase large chain; AltName:
            Full=Carbamoyl-phosphate synthetase ammonia chain
 gi|12721891|gb|AAK03589.1| CarB [Pasteurella multocida subsp. multocida str. Pm70]
 gi|356597905|gb|AET16631.1| carbamoyl-phosphate synthase large chain [Pasteurella multocida
            36950]
 gi|404381604|gb|EJZ78073.1| Carbamoyl-phosphate synthase large chain [Pasteurella multocida
            subsp. gallicida P1059]
          Length = 1068

 Score = 1277 bits (3304), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 639/1084 (58%), Positives = 813/1084 (75%), Gaps = 24/1084 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD+  ILI+GAGPIVIGQACEFDYSG QACKAL+EEGY+V+L+NSNPATIMTDP +AD
Sbjct: 3    KRTDINTILIIGAGPIVIGQACEFDYSGAQACKALREEGYKVVLVNSNPATIMTDPDMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+    VE+++EKERPDA+LPTMGGQTALN A+ L+++G L+KY VELIGAK DA
Sbjct: 63   VTYIEPIEWRTVEKIIEKERPDAILPTMGGQTALNCALDLSKNGVLKKYNVELIGAKEDA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  FK+AM+ IG+ TP S + +TL+E  +  +E+G FP +IRP+FT+GG+GGGI
Sbjct: 123  IDKAEDRGRFKEAMEKIGLSTPKSFVCHTLEEAWAAQSEVG-FPTLIRPSFTMGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYNK+EF AIC+ G  AS T ++L+E+S+LGWKEYE+EV+RD ADN +I+CSIEN DPMG
Sbjct: 182  AYNKDEFYAICERGFDASPTHELLIEQSVLGWKEYEMEVVRDKADNCIIVCSIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ +R+ SIA++REIGV+ GGSNVQFA+NP +GE++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQIMRNASIAVLREIGVDTGGSNVQFAINPENGEMIVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKK-TPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+L+++ NDIT    PASFEPSIDYVVTK+PR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGYTLNELRNDITGGLIPASFEPSIDYVVTKVPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            FAFEKFP ++  LTTQMKSVGE MA+GRTFQES QKALR LE G  G+       +  + 
Sbjct: 362  FAFEKFPQADDRLTTQMKSVGEVMAMGRTFQESLQKALRGLETGICGFNL-----MSEEP 416

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
            E+++  L  P P R+  +  A   G  +DE+H  S ID WFL Q ++L+  E  L  +++
Sbjct: 417  EKIRQELGNPGPIRILYVADAFGAGFTLDEVHHYSKIDPWFLIQIQDLVLEELALEKRTL 476

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
             ++   +   +KR+GFSDK+IA  TKS E  VR KR+SL + P YKRVDTCA EF ++T 
Sbjct: 477  DDLDYAELRRLKRKGFSDKRIAQLTKSAESAVRNKRVSLNLHPVYKRVDTCAGEFTSDTA 536

Query: 627  YMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSN 686
            Y+YS+Y+ ECES P+ KKK++ILGGGPNRIGQGIEFDYCC H S +L+ AG+ETIM+N N
Sbjct: 537  YLYSTYEEECESRPSDKKKIMILGGGPNRIGQGIEFDYCCVHASLALREAGFETIMVNCN 596

Query: 687  PETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHR 746
            PETVSTD+DTSDRLYFEPLT+EDVL +I +E+P G+IV +GGQTPLKL+  +H       
Sbjct: 597  PETVSTDFDTSDRLYFEPLTLEDVLEIIHVEKPHGVIVHYGGQTPLKLANDLH------- 649

Query: 747  LPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEIG 806
               A+G   V I GTS DSIDAAEDRERF  I+ +L ++QP    A++  +A+ +A+E+G
Sbjct: 650  ---ANG---VNIIGTSADSIDAAEDRERFQQILHKLHLKQPTNRTARNAEEAVKLAEEVG 703

Query: 807  YPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALAD 866
            YP+VVRPSYVLGGRAM+IVY  + L  Y+  AV V  + P+L+D +L++AIE+DVD + D
Sbjct: 704  YPLVVRPSYVLGGRAMQIVYNVDELQRYMREAVSVSNDSPILLDHFLNNAIEVDVDCICD 763

Query: 867  SCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNC 926
                VVIGGIM+HIEQAG+HSGDSAC +P  ++S    D I   T ++A  L V GLMN 
Sbjct: 764  G-AEVVIGGIMQHIEQAGIHSGDSACSLPPYSLSQEVQDEIRRQTAEMAFALGVKGLMNV 822

Query: 927  QYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPKH 986
            Q+A+   G +Y+LE NPRASRTVPFVSKA G PLAK AA VM+G+SL   G   EVIP  
Sbjct: 823  QFAV-QDGVIYVLEVNPRASRTVPFVSKATGRPLAKIAARVMAGESLKAQGIQGEVIPPF 881

Query: 987  VSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVFL 1046
             SVKEAV PF KF G D +LGPEMRSTGEVMG+  +F  AF KAQ+ A +++P +G VFL
Sbjct: 882  YSVKEAVFPFIKFPGVDTVLGPEMRSTGEVMGVGTTFAEAFLKAQLGANERIPKTGKVFL 941

Query: 1047 SLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVAN 1106
            S+ND  KP L  IA+   + G+ + +T GTA FL   G+AV+ + K+ EGRP+  D + N
Sbjct: 942  SVNDADKPRLLPIARQLQESGYGLCATLGTAKFLREHGVAVQIINKVREGRPNIVDAIKN 1001

Query: 1107 GQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTVTMTA 1166
            G+I M++ T SG +    DG  +RR  L  KV + TT++GA A A ++  L  + V   +
Sbjct: 1002 GEIAMVINTVSGLAETVTDGHAIRRSALQQKVFLQTTLAGAEALAGSVEYLADSEV--YS 1059

Query: 1167 LQDF 1170
            LQD 
Sbjct: 1060 LQDL 1063


>gi|389774844|ref|ZP_10192963.1| carbamoyl phosphate synthase large subunit [Rhodanobacter
            spathiphylli B39]
 gi|388438443|gb|EIL95198.1| carbamoyl phosphate synthase large subunit [Rhodanobacter
            spathiphylli B39]
          Length = 1075

 Score = 1277 bits (3304), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 637/1068 (59%), Positives = 800/1068 (74%), Gaps = 26/1068 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ +LI+GAGPIVIGQACEFDYSG QACKALKEEGY VIL+NSNPATIMTDP  AD
Sbjct: 3    KRTDIKSVLIIGAGPIVIGQACEFDYSGAQACKALKEEGYRVILVNSNPATIMTDPDTAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
              YI P+  + VE+++ KERPDA+LPTMGGQT LN A+ LA++G LEKY VELIGAK +A
Sbjct: 63   AVYIEPINWQTVERIIAKERPDAVLPTMGGQTGLNCALDLADNGVLEKYNVELIGAKREA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I+ AEDR+LF+ AM  IG++ P + I  T ++ +    ++G FP +IRP+FTLGG+GGGI
Sbjct: 123  IRMAEDRELFRVAMAEIGLECPKAEIARTFEQALETQAKVG-FPTVIRPSFTLGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEFE I K GL  S TS+VLVE+S+LGWKE+E+EV+RD ADN +I+CSIEN+DPMG
Sbjct: 182  AYNREEFEEIVKRGLELSPTSEVLVEESVLGWKEFEMEVVRDTADNCIIVCSIENLDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQRLRD SIA++R+IGV+ GGSNVQF +N  DG V+VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQRLRDASIAVLRKIGVDTGGSNVQFGINAEDGRVVVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKK-TPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT   TPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGYTLDELKNDITGGLTPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            FAFEKFP ++  LTTQMKSVGE MA+GR+F ES QKALR LE G +G    N   LD   
Sbjct: 362  FAFEKFPAADARLTTQMKSVGEVMAIGRSFHESLQKALRGLEIGKTGL---NPTGLDLGT 418

Query: 507  EQ----LKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLL 562
            E     LK  LR P PDR+  +  A + G+ ++E+  LS +D WFL  F++++  E  ++
Sbjct: 419  EDGLAVLKRELREPRPDRVFHLADAFRAGLSLEEVFNLSRVDPWFLAAFEDIVLTEAEVI 478

Query: 563  TQSVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFE 622
             Q ++ + +    E+KR+GF+D +IA    + E  VR  R +LGV P YKRVD+CAAEF 
Sbjct: 479  AQGITALDEPRLRELKRQGFADARIAELLNTDEAAVRHLRHTLGVRPVYKRVDSCAAEFA 538

Query: 623  ANTPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIM 682
             +T YMYS+Y+ ECE+ PT + K+++LGGGPNRIGQGIEFDYCC H S +L+  GYETIM
Sbjct: 539  TSTAYMYSTYEEECEAEPTSRDKIIVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIM 598

Query: 683  MNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYL 742
            +N NPETVSTDYDTSDRLYFEPLT+EDVL ++ +E+P+G+IVQ+GGQTPLKL+       
Sbjct: 599  VNCNPETVSTDYDTSDRLYFEPLTLEDVLEIVHVEKPKGVIVQYGGQTPLKLA------- 651

Query: 743  DEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIA 802
               R   A+G   V I GTSPDSID AEDRERF  +I+++ ++QP    A++  +ALA+A
Sbjct: 652  ---RALEAAG---VPIIGTSPDSIDLAEDRERFQQMIEKIGLKQPPNRTARNADEALALA 705

Query: 803  KEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVD 862
            +EIGYP+VVRPSYVLGGRAME+V+ D  L  Y+ +AV+V  + PVL+D++L  A+E+DVD
Sbjct: 706  REIGYPLVVRPSYVLGGRAMEVVHDDADLSRYIRDAVKVSNDSPVLLDRFLDHAVEVDVD 765

Query: 863  ALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCG 922
             +AD+ G V+IGGIMEHIE+AGVHSGDS+C +P  ++S+   D +      +AK L V G
Sbjct: 766  VIADAEGTVLIGGIMEHIEEAGVHSGDSSCSLPPYSLSTEIQDEMRRQVSAMAKELKVIG 825

Query: 923  LMNCQYAITTSGD-VYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKE 981
            LMN Q+AI   GD VY+LE NPRASRTVPFVSKA G PLAK AA VM+G+SL  LG T+E
Sbjct: 826  LMNTQFAI--QGDTVYILEVNPRASRTVPFVSKATGVPLAKVAARVMAGRSLVSLGATRE 883

Query: 982  VIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLS 1041
            VIP + SVKEA+ PF KFQ  D +LGPEMRSTGEVMG+  SF  AFA+   AAG +    
Sbjct: 884  VIPSYYSVKEAIFPFLKFQNVDPILGPEMRSTGEVMGVGRSFGAAFARGHEAAGIRTLTV 943

Query: 1042 GTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAG 1101
            G  FLS+ D  K  L  +AK  +  GF +V+TSGTA +L   G+A ERV K+ EGRPH  
Sbjct: 944  GKAFLSVRDSDKDRLLTVAKEIIGRGFTLVATSGTAGYLADHGVACERVNKVLEGRPHIV 1003

Query: 1102 DMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALA 1149
            D++ NG+I  +V T+ G      D   +RR  L ++V   TTV+GA A
Sbjct: 1004 DLIKNGEIAYIVNTTEGKQAIA-DSFSIRREALQHRVTYSTTVAGARA 1050


>gi|190574173|ref|YP_001972018.1| carbamoyl phosphate synthase large subunit [Stenotrophomonas
            maltophilia K279a]
 gi|424668601|ref|ZP_18105626.1| carbamoyl-phosphate synthase large chain [Stenotrophomonas
            maltophilia Ab55555]
 gi|190012095|emb|CAQ45717.1| putative carbamoyl-phosphate synthase large chain [Stenotrophomonas
            maltophilia K279a]
 gi|401068863|gb|EJP77387.1| carbamoyl-phosphate synthase large chain [Stenotrophomonas
            maltophilia Ab55555]
          Length = 1080

 Score = 1277 bits (3304), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 634/1071 (59%), Positives = 803/1071 (74%), Gaps = 27/1071 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTDL+ ILI+GAGPIVIGQACEFDYSG QACKAL++EGY V+L+NSNPATIMTDP +AD
Sbjct: 3    KRTDLKTILIIGAGPIVIGQACEFDYSGAQACKALRDEGYRVVLVNSNPATIMTDPEMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
              YI P+  + VE+++ KE+PDALLPTMGGQTALN A+ LA++G LEKY VELIGAK +A
Sbjct: 63   AVYIEPINWQTVEKIIAKEKPDALLPTMGGQTALNCALDLADNGVLEKYNVELIGAKREA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I+ AEDR+LF+ AM  IG++ P + + +TLDE + I   +G +P IIRP+FTLGG+GGGI
Sbjct: 123  IRMAEDRELFRVAMGEIGLECPTAAVAHTLDEALEIQTRVG-YPTIIRPSFTLGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EE   I   GL  S T++VLVE+S+LGWKE+E+EV+RD ADN +I+CSIEN+DPMG
Sbjct: 182  AYNREELVEIVSRGLELSPTTEVLVEESVLGWKEFEMEVVRDTADNCIIVCSIENLDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQRLRD SIA++R+IGV+ GGSNVQF +NP  G V+VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQRLRDASIAVLRKIGVDTGGSNVQFGINPKTGRVVVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKK-TPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ N+IT   TPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGYTLDELKNEITGGLTPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDW-- 504
            FAFEKFP ++  LTTQMKSVGE MA+GRTFQES QKALR LE G  G+  +    LD   
Sbjct: 362  FAFEKFPAADARLTTQMKSVGEVMAMGRTFQESVQKALRGLETGKVGFDPTG---LDLGN 418

Query: 505  --DWEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLL 562
              D + L+  L+ P P+R+  +  A + GM VDEI+ LSFID WFL Q +E+I  E  + 
Sbjct: 419  EDDLQTLRRELKAPGPERLFFVADAFRAGMSVDEIYALSFIDHWFLDQIEEIIAAEADVA 478

Query: 563  TQSVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFE 622
               +  +      ++KR GFSD ++A  T + E  +R  R +  V P YKRVD+CA EF 
Sbjct: 479  AGGIDALDAARLRKLKRAGFSDARLAQLTGTNEAAIRALRRAHKVRPVYKRVDSCAGEFS 538

Query: 623  ANTPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIM 682
              T Y+YS+Y+ ECE+AP+ + K++ILGGGPNRIGQGIEFDYCC H + +L+  GYETIM
Sbjct: 539  TGTAYLYSTYEDECEAAPSNRDKIMILGGGPNRIGQGIEFDYCCVHAALALREDGYETIM 598

Query: 683  MNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYL 742
            +N NPETVSTDYDTSDRLYFEPLT+EDVL +++LE+P+G+IVQ+GGQTPLKL+       
Sbjct: 599  VNCNPETVSTDYDTSDRLYFEPLTLEDVLEIVELEQPKGVIVQYGGQTPLKLA------- 651

Query: 743  DEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIA 802
               R   A+G   V + GTSPDSID AEDRERF  ++ +L ++QP   IA+++ +AL +A
Sbjct: 652  ---RALEANG---VPVIGTSPDSIDLAEDRERFQQLVDKLGLKQPPNRIARNDQEALLLA 705

Query: 803  KEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVD 862
            +EIGYP+VVRPSYVLGGRAMEIVY +  L  Y+ +AV+V  + PVL+D++L +A+E DVD
Sbjct: 706  REIGYPLVVRPSYVLGGRAMEIVYGEADLARYVRDAVKVSNDSPVLLDRFLDNAVECDVD 765

Query: 863  ALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCG 922
             +AD  GNV+IGG+MEHIE+AGVHSGDS+C +P  ++S+     +    ++LAK LNV G
Sbjct: 766  IIADKEGNVLIGGVMEHIEEAGVHSGDSSCSLPPYSLSAETQAELRRQVVELAKALNVVG 825

Query: 923  LMNCQYAITTSGD----VYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGF 978
            LMN Q+AI TS +    +YLLE NPRASRTVPFVSKA G PLAK AA  M+GKSL + G 
Sbjct: 826  LMNTQFAIQTSDEGADTIYLLEVNPRASRTVPFVSKATGMPLAKIAARCMAGKSLAEQGA 885

Query: 979  TKEVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKL 1038
            TKE++P + SVKEA+ PF KFQG D +LGPEMRSTGEVMG+  SF  AFA+AQ A G K 
Sbjct: 886  TKEIVPDYYSVKEAIFPFAKFQGVDPILGPEMRSTGEVMGVGRSFNAAFARAQEAGGIKA 945

Query: 1039 PLSGTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRP 1098
            P  G  F+S+ D  K  +  +AKA L  G+ +V+T GTA +L+  G+  E + K+ EGRP
Sbjct: 946  PPVGKAFVSVRDPDKKRVLPVAKALLARGYSLVATRGTAAWLQQHGMDCEIINKVVEGRP 1005

Query: 1099 HAGDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALA 1149
            H  D + NG+I  +V T+ G S    D   +RR  L ++V   TT++GA A
Sbjct: 1006 HIVDSIKNGEIVYIVNTTEGRSAIN-DSFSIRREALQHRVTYSTTIAGAKA 1055


>gi|293607010|ref|ZP_06689354.1| carbamoyl-phosphate synthase, large subunit [Achromobacter piechaudii
            ATCC 43553]
 gi|292814607|gb|EFF73744.1| carbamoyl-phosphate synthase, large subunit [Achromobacter piechaudii
            ATCC 43553]
          Length = 1080

 Score = 1277 bits (3304), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 649/1091 (59%), Positives = 820/1091 (75%), Gaps = 28/1091 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTDL+ ILI+GAGPI+IGQACEFDYSG QACKALK EGY  IL+NSNPATIMTDP  AD
Sbjct: 3    KRTDLKSILIIGAGPIIIGQACEFDYSGAQACKALKAEGYRTILVNSNPATIMTDPETAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+T + VE+++E+E+PDALLPTMGGQTALN A+ LA +G L+K+ VELIGA   A
Sbjct: 63   VTYIEPITWQAVEKIIEREKPDALLPTMGGQTALNCALDLAHNGVLKKHNVELIGANEHA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECIS----IANEIGE--FPLIIRPAFTLG 261
            I+KAEDR  FKQAM  IG+++  SG+ +++DE       IA E+G   FP +IRP+FT+G
Sbjct: 123  IEKAEDRQKFKQAMTDIGLESAKSGVAHSMDEAWEVQRRIAVEVGTSGFPAVIRPSFTMG 182

Query: 262  GTGGGIAYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIE 321
            G+GGGIAYN EEFE IC+ GL AS T+++L+E+SLLGWKE+E+ V+RD ADN +I+CSIE
Sbjct: 183  GSGGGIAYNAEEFETICRRGLEASPTNELLIEESLLGWKEFEMVVVRDKADNCIIVCSIE 242

Query: 322  NVDPMGVHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEV 381
            N+DPMGVHTGDSITVAPAQTLTDKEYQ +R+ SIA++REIGV+ GGSNVQFAVNP +G +
Sbjct: 243  NLDPMGVHTGDSITVAPAQTLTDKEYQIMRNASIAVLREIGVDTGGSNVQFAVNPKNGRM 302

Query: 382  MVIEMNPRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITK-KTPASFEPSIDYV 440
            +VIEMNPRVSRSSALASKATGFPIAK+AA+L+VGY+LD++ N+IT   TPASFEPSIDYV
Sbjct: 303  IVIEMNPRVSRSSALASKATGFPIAKVAARLAVGYTLDELQNEITGGATPASFEPSIDYV 362

Query: 441  VTKIPRFAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVK 500
            VTK+PRFAFEKFP ++  LTTQMKSVGE MA+GRTFQESFQKALR LE G  G     + 
Sbjct: 363  VTKVPRFAFEKFPTADARLTTQMKSVGEVMAIGRTFQESFQKALRGLEVGVDG-----LN 417

Query: 501  ELDWDWEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQF 560
            +   D E+L+  L  P P+R+  +  A  +G  +DE+H ++ ID WFL+Q KE++D+E  
Sbjct: 418  QKTTDREKLQVELGEPGPERIWYVGDAFAQGFTLDEVHNITHIDPWFLSQIKEIVDIELA 477

Query: 561  LLTQSVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAE 620
            L  ++++++     +E+KRRGFSD+++AF   S E EVR+ R  L V P YKRVDTCAAE
Sbjct: 478  LEQKTLADLDYATLFELKRRGFSDRRLAFLLDSAESEVRKLRHQLNVRPVYKRVDTCAAE 537

Query: 621  FEANTPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYET 680
            F   T YMYS+Y+ ECESAPT +KK+++LGGGPNRIGQGIEFDYCC H + +L+  GYET
Sbjct: 538  FATRTAYMYSTYEEECESAPTDRKKIVVLGGGPNRIGQGIEFDYCCVHAALALREDGYET 597

Query: 681  IMMNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQ 740
            IM+N NPETVSTDYDTSDRLYFEPLT+EDVL ++  E P G+IVQ+GGQTPLKL+     
Sbjct: 598  IMVNCNPETVSTDYDTSDRLYFEPLTLEDVLEIVHKENPVGMIVQYGGQTPLKLA----- 652

Query: 741  YLDEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALA 800
                 R   A+G   V I GTSP+SID AEDRERF  ++ +L + QP    A++E +ALA
Sbjct: 653  -----RALEANG---VPIIGTSPESIDVAEDRERFQKLLNKLGLRQPPNRTARTEGEALA 704

Query: 801  IAKEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEID 860
             A EIGYP+VVRPSYVLGGRAMEIV+  + L  Y+  AV+V  + PVL+D++L++A E+D
Sbjct: 705  HATEIGYPLVVRPSYVLGGRAMEIVHEQQDLERYMREAVKVSNDSPVLLDRFLNNATEVD 764

Query: 861  VDALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNV 920
            VD LAD    V IGG+MEHIEQAGVHSGDSAC +P  ++S+  +  I   T  +AK LNV
Sbjct: 765  VDCLADG-ETVFIGGVMEHIEQAGVHSGDSACSLPPYSLSAEVIAEIKRQTTMMAKALNV 823

Query: 921  CGLMNCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTK 980
             GLMN Q+AI   GDVY+LE NPRASRTVP+VSKA G  LAK AA  M+G++L D G TK
Sbjct: 824  SGLMNVQFAI-QGGDVYVLEVNPRASRTVPYVSKATGLQLAKIAARAMAGRTLADQGITK 882

Query: 981  EVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPL 1040
            EV+P + SVKEAV PF KF G D +LGPEM+STGEVMG+ MSF  AF K+Q+AAG +LP 
Sbjct: 883  EVVPPYFSVKEAVFPFVKFPGVDTILGPEMKSTGEVMGVGMSFGEAFVKSQLAAGVRLPE 942

Query: 1041 SGTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHA 1100
            SGTVF+S+ +  KP    +A+    +GFK+V+T GTA  +E  GI V+ V K+ EGRPH 
Sbjct: 943  SGTVFISVKNQDKPRAVEVARGLHALGFKLVATRGTAAEIETAGIPVQVVNKVTEGRPHI 1002

Query: 1101 GDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSN 1160
             DMV NG+I +++ T        +D   +R + LA +V   TT++GA A  E ++ L+  
Sbjct: 1003 VDMVKNGEIALVINTVEERRNAIVDSRTIRTQSLAARVTFFTTIAGARAAVEGMQYLRQG 1062

Query: 1161 T-VTMTALQDF 1170
              + +  LQD 
Sbjct: 1063 LGLQVYPLQDL 1073


>gi|33600433|ref|NP_887993.1| carbamoyl phosphate synthase large subunit [Bordetella bronchiseptica
            RB50]
 gi|412339320|ref|YP_006968075.1| carbamoyl-phosphate synthase large subunit [Bordetella bronchiseptica
            253]
 gi|427813667|ref|ZP_18980731.1| carbamoyl-phosphate synthase large chain [Bordetella bronchiseptica
            1289]
 gi|33568032|emb|CAE31945.1| carbamoyl-phosphate synthase large chain [Bordetella bronchiseptica
            RB50]
 gi|408769154|emb|CCJ53929.1| carbamoyl-phosphate synthase large chain [Bordetella bronchiseptica
            253]
 gi|410564667|emb|CCN22214.1| carbamoyl-phosphate synthase large chain [Bordetella bronchiseptica
            1289]
          Length = 1080

 Score = 1277 bits (3304), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 645/1078 (59%), Positives = 815/1078 (75%), Gaps = 27/1078 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTDL+ ILI+GAGPI+IGQACEFDYSG QACKALK EGY  IL+NSNPATIMTDP  AD
Sbjct: 3    KRTDLKSILIIGAGPIIIGQACEFDYSGAQACKALKAEGYRTILVNSNPATIMTDPETAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+T + VE+++E+E+PDALLPTMGGQTALN A+ LA  G L+K+ VELIGA   A
Sbjct: 63   VTYIEPITWQAVEKIIEREKPDALLPTMGGQTALNCALDLAHHGVLKKHNVELIGANEHA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECIS----IANEIGE--FPLIIRPAFTLG 261
            I+KAEDR  FKQAM  IG+++  SG+ +++DE       IA +IG   FP++IRP+FTLG
Sbjct: 123  IEKAEDRQKFKQAMTDIGLESAKSGVAHSMDEAWEVQRRIAADIGTAGFPVVIRPSFTLG 182

Query: 262  GTGGGIAYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIE 321
            G+GGGIAYN EEFE IC+ GL AS T ++L+E+SLLGWKE+E+EV+RD ADN +I+CSIE
Sbjct: 183  GSGGGIAYNAEEFEVICRRGLEASPTKELLIEESLLGWKEFEMEVVRDKADNCIIVCSIE 242

Query: 322  NVDPMGVHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEV 381
            N+DPMGVHTGDSITVAPAQTLTDKEYQ +R+ SIA++REIGV+ GGSNVQFAVNP +G +
Sbjct: 243  NLDPMGVHTGDSITVAPAQTLTDKEYQIMRNASIAVLREIGVDTGGSNVQFAVNPQNGRM 302

Query: 382  MVIEMNPRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITK-KTPASFEPSIDYV 440
            +VIEMNPRVSRSSALASKATGFPIAK+AA+L+VGY+LD++ N+IT   TPASFEP+IDYV
Sbjct: 303  IVIEMNPRVSRSSALASKATGFPIAKVAARLAVGYTLDELRNEITGGATPASFEPTIDYV 362

Query: 441  VTKIPRFAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVK 500
            VTK+PRFAFEKFP ++  LTTQMKSVGE MA+GRTFQESFQKALR LE G  G     + 
Sbjct: 363  VTKVPRFAFEKFPQADARLTTQMKSVGEVMAMGRTFQESFQKALRGLEVGVDG-----LN 417

Query: 501  ELDWDWEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQF 560
            +   D E+L+  L  P P+R+  +  A  +G  +DE+H L+ ID WFL Q KE++D+E  
Sbjct: 418  QKTTDREKLQIELGEPGPERIWYVGDAFAQGFTLDEVHGLTRIDPWFLAQIKEIVDIELA 477

Query: 561  LLTQSVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAE 620
            L  ++++++     +E+KRRGFSD+++AF   S+E EVR+ R  L V P YKRVDTCAAE
Sbjct: 478  LEQKTLADLDYATLWELKRRGFSDRRLAFLLDSSESEVRKLRHQLNVRPVYKRVDTCAAE 537

Query: 621  FEANTPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYET 680
            F  NT YMYS+Y+ ECES PT +KK+++LGGGPNRIGQGIEFDYCC H + +L+  GYET
Sbjct: 538  FATNTAYMYSTYEEECESQPTDRKKIIVLGGGPNRIGQGIEFDYCCVHAALALREDGYET 597

Query: 681  IMMNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQ 740
            IM+N NPETVSTDYDTSDRLYFEPLT+EDVL ++  E P G+IVQ+GGQTPLKL+     
Sbjct: 598  IMVNCNPETVSTDYDTSDRLYFEPLTLEDVLEIVHKENPVGMIVQYGGQTPLKLA----- 652

Query: 741  YLDEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALA 800
                 R   A+G   V I GTSP+SID AEDRERF  ++ +L + QP    A++EA+ALA
Sbjct: 653  -----RALEANG---VPIIGTSPESIDVAEDRERFQKLLNKLGLRQPPNRTARTEAEALA 704

Query: 801  IAKEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEID 860
             A EIGYP+VVRPSYVLGGRAMEIV+  + L  Y+  AV+V  + PVL+D++L+DA E+D
Sbjct: 705  HASEIGYPLVVRPSYVLGGRAMEIVHEQQDLERYMREAVKVSNDSPVLLDRFLNDATEVD 764

Query: 861  VDALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNV 920
            VD LAD    V IGG+MEHIEQAGVHSGDSAC +P  ++S+  +  I   T  +AK LNV
Sbjct: 765  VDCLADG-QTVFIGGVMEHIEQAGVHSGDSACSLPPYSLSAEVIAEIKRQTTMMAKALNV 823

Query: 921  CGLMNCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTK 980
             GLMN Q+AI   GDVY+LE NPRASRTVP+VSKA G  LAK AA  M+G++L D G T+
Sbjct: 824  SGLMNVQFAI-QGGDVYVLEVNPRASRTVPYVSKATGLQLAKIAARAMAGRTLADQGITR 882

Query: 981  EVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPL 1040
            EV+P + SVKEAV PF KF G D +LGPEM+STGEVMG+  SF  AF K+Q+AAG +LP 
Sbjct: 883  EVVPPYFSVKEAVFPFVKFPGVDTILGPEMKSTGEVMGVGNSFGEAFVKSQLAAGVRLPD 942

Query: 1041 SGTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHA 1100
            SGTVF+S+ +  KP    +A+   ++GFK+V+T GTA  +E  GI V+ V K+ EGRPH 
Sbjct: 943  SGTVFISVRNQDKPRAVEVARGLHNLGFKLVATRGTAAEIEAAGIPVQVVNKVTEGRPHI 1002

Query: 1101 GDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLK 1158
             DMV NG++ +++ T         D   +R + LA ++   TT++GA A  E ++ ++
Sbjct: 1003 VDMVKNGEVSLVINTVEERRNAIADSRTIRTQALANRITFFTTIAGARAAVEGMQFMR 1060


>gi|348590531|ref|YP_004874993.1| carbamoyl-phosphate synthase large subunit [Taylorella asinigenitalis
            MCE3]
 gi|347974435|gb|AEP36970.1| Carbamoyl-phosphate synthase large chain [Taylorella asinigenitalis
            MCE3]
          Length = 1081

 Score = 1276 bits (3303), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 636/1078 (58%), Positives = 813/1078 (75%), Gaps = 27/1078 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTDL+ ILI+GAGPIVIGQACEFDYSG QACKALK +GY  IL+NSNPATIMTDP  AD
Sbjct: 3    KRTDLKSILIIGAGPIVIGQACEFDYSGAQACKALKADGYRTILVNSNPATIMTDPDTAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
              YI P+T + +E+V+E E+PDA+LPTMGGQTALN A+ L++ G LEK+GVELIGA   A
Sbjct: 63   VIYIEPITWKSLEKVIEIEKPDAILPTMGGQTALNCALELSKKGVLEKHGVELIGANAQA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECIS----IANEIGE--FPLIIRPAFTLG 261
            I+KAEDR  FK+AM +IG+++  SGI ++++E       IA EIG   FP++IRP+FTLG
Sbjct: 123  IEKAEDRMKFKEAMSSIGLESAKSGIAHSMEEAWEVQRRIAEEIGTAGFPVVIRPSFTLG 182

Query: 262  GTGGGIAYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIE 321
            GTGGGIAYN EEFE IC  GL AS T+++L+E+SLLGWKE+E+EV+RD ADN +IICSIE
Sbjct: 183  GTGGGIAYNPEEFEVICTRGLEASPTNELLIEESLLGWKEFEMEVIRDKADNCIIICSIE 242

Query: 322  NVDPMGVHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEV 381
            N+DPMGVHTGDSITVAPAQTLTDKEYQ +RD SIA++REIGV+ GGSNVQFAVNP +G +
Sbjct: 243  NLDPMGVHTGDSITVAPAQTLTDKEYQIMRDASIAVLREIGVDTGGSNVQFAVNPENGRM 302

Query: 382  MVIEMNPRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYV 440
            +VIEMNPRVSRSSALASKATGFPIAK+A++L+VGY+LD++ N+IT   TPASFEP++DYV
Sbjct: 303  IVIEMNPRVSRSSALASKATGFPIAKVASRLAVGYTLDELSNEITGGATPASFEPTLDYV 362

Query: 441  VTKIPRFAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVK 500
            VTKIPRFAFEKFP ++  LTTQMKSVGE MA+GRTF+ESFQKALR LE G  G     V 
Sbjct: 363  VTKIPRFAFEKFPQADSRLTTQMKSVGEVMAIGRTFKESFQKALRGLEVGVDGLNLKTV- 421

Query: 501  ELDWDWEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQF 560
                D E+L+  L  P P+R+  +  A  +G  ++++H L+ ID WFL Q KE++D+E  
Sbjct: 422  ----DLEKLQVELAEPGPERIWFVADAFDRGFSIEDVHRLTKIDLWFLEQIKEIVDIELA 477

Query: 561  LLTQSVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAE 620
            L  +++ ++  +    +KR GFSD+++A+   ++E E+R+ R+  GV P YKRVDTCAAE
Sbjct: 478  LEQKTLGDIDAEIMRLLKREGFSDRRLAYLLDTSESEIRKIRIQQGVRPVYKRVDTCAAE 537

Query: 621  FEANTPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYET 680
            F+  T YMYS+Y+ E E+ PT KKK+++LGGGPNRIGQGIEFDYCC H + SL+S GYET
Sbjct: 538  FDTKTAYMYSTYEEESEALPTNKKKIMVLGGGPNRIGQGIEFDYCCVHAALSLKSDGYET 597

Query: 681  IMMNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQ 740
            IM+N NPETVSTDYDT+DRLYFEPLT+EDVL ++++E+P G+IVQ+GGQTPLKL+     
Sbjct: 598  IMVNCNPETVSTDYDTADRLYFEPLTLEDVLEIVEVEKPVGVIVQYGGQTPLKLA----S 653

Query: 741  YLDEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALA 800
             L+ + +P         I GTSP+SID AEDRERF  ++++L+++QP    A++E +AL 
Sbjct: 654  DLELNGVP---------ILGTSPESIDIAEDRERFQKLLQKLNLKQPPNRTARTEEEALT 704

Query: 801  IAKEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEID 860
            +A EIGYP+VVRPSYVLGGRAMEIV+    L  Y+  AV+V  + PVL+D+YL+DAIEID
Sbjct: 705  LANEIGYPLVVRPSYVLGGRAMEIVHDQMDLERYMTAAVKVSNDSPVLLDRYLNDAIEID 764

Query: 861  VDALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNV 920
            VD + D   +V + G+MEHIEQAGVHSGDSAC +P  +++   ++ I   T  +AK LNV
Sbjct: 765  VDCICDGT-DVYVAGVMEHIEQAGVHSGDSACSLPPHSLTKEMIEEIKRQTRLMAKALNV 823

Query: 921  CGLMNCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTK 980
             GLMN Q+AI  + +VY+LE NPRASRTVPFVSKA G P+AK AA VM+GKSL DLG T+
Sbjct: 824  RGLMNVQFAI-QANEVYVLEVNPRASRTVPFVSKATGLPVAKIAARVMAGKSLKDLGVTE 882

Query: 981  EVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPL 1040
            E  PK   VKEAV PF KF G D +LGPEM+STGEVMG+  +F  AF K+QIAAG  LP 
Sbjct: 883  EKSPKLYCVKEAVFPFAKFPGVDTILGPEMKSTGEVMGVGETFGEAFVKSQIAAGIDLPK 942

Query: 1041 SGTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHA 1100
            +G VFLS+ D  KP +  IAK  LD+GFKI +T GTA  +   GI V+ V K+ EGRPH 
Sbjct: 943  AGLVFLSVKDSDKPKIIPIAKGLLDLGFKICATRGTASAIYEAGIPVQVVNKVTEGRPHI 1002

Query: 1101 GDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLK 1158
             DM+ NG++ +++ T         D   +R   L+ +V   TT++ A A  E ++ L+
Sbjct: 1003 VDMLKNGELNLVINTVEEKRNAINDSRSIRTNALSARVTAYTTIAEASAAVEGLKYLR 1060


>gi|410419198|ref|YP_006899647.1| carbamoyl-phosphate synthase large subunit [Bordetella bronchiseptica
            MO149]
 gi|427820554|ref|ZP_18987617.1| carbamoyl-phosphate synthase large chain [Bordetella bronchiseptica
            D445]
 gi|427824472|ref|ZP_18991534.1| carbamoyl-phosphate synthase large chain [Bordetella bronchiseptica
            Bbr77]
 gi|408446493|emb|CCJ58162.1| carbamoyl-phosphate synthase large chain [Bordetella bronchiseptica
            MO149]
 gi|410571554|emb|CCN19783.1| carbamoyl-phosphate synthase large chain [Bordetella bronchiseptica
            D445]
 gi|410589737|emb|CCN04810.1| carbamoyl-phosphate synthase large chain [Bordetella bronchiseptica
            Bbr77]
          Length = 1080

 Score = 1276 bits (3303), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 645/1078 (59%), Positives = 815/1078 (75%), Gaps = 27/1078 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTDL+ ILI+GAGPI+IGQACEFDYSG QACKALK EGY  IL+NSNPATIMTDP  AD
Sbjct: 3    KRTDLKSILIIGAGPIIIGQACEFDYSGAQACKALKAEGYRTILVNSNPATIMTDPETAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+T + VE+++E+E+PDALLPTMGGQTALN A+ LA  G L+K+ VELIGA   A
Sbjct: 63   VTYIEPITWQAVEKIIEREKPDALLPTMGGQTALNCALDLAHHGVLKKHNVELIGANEHA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECIS----IANEIGE--FPLIIRPAFTLG 261
            I+KAEDR  FKQAM  IG+++  SG+ +++DE       IA +IG   FP++IRP+FTLG
Sbjct: 123  IEKAEDRQKFKQAMTDIGLESAKSGVAHSMDEAWEVQRRIAADIGTAGFPVVIRPSFTLG 182

Query: 262  GTGGGIAYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIE 321
            G+GGGIAYN EEFE IC+ GL AS T ++L+E+SLLGWKE+E+EV+RD ADN +I+CSIE
Sbjct: 183  GSGGGIAYNAEEFEIICRRGLEASPTKELLIEESLLGWKEFEMEVVRDKADNCIIVCSIE 242

Query: 322  NVDPMGVHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEV 381
            N+DPMGVHTGDSITVAPAQTLTDKEYQ +R+ SIA++REIGV+ GGSNVQFAVNP +G +
Sbjct: 243  NLDPMGVHTGDSITVAPAQTLTDKEYQIMRNASIAVLREIGVDTGGSNVQFAVNPQNGRM 302

Query: 382  MVIEMNPRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITK-KTPASFEPSIDYV 440
            +VIEMNPRVSRSSALASKATGFPIAK+AA+L+VGY+LD++ N+IT   TPASFEP+IDYV
Sbjct: 303  IVIEMNPRVSRSSALASKATGFPIAKVAARLAVGYTLDELRNEITGGATPASFEPTIDYV 362

Query: 441  VTKIPRFAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVK 500
            VTK+PRFAFEKFP ++  LTTQMKSVGE MA+GRTFQESFQKALR LE G  G     + 
Sbjct: 363  VTKVPRFAFEKFPQADARLTTQMKSVGEVMAMGRTFQESFQKALRGLEVGVDG-----LN 417

Query: 501  ELDWDWEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQF 560
            +   D E+L+  L  P P+R+  +  A  +G  +DE+H L+ ID WFL Q KE++D+E  
Sbjct: 418  QKTTDREKLQIELGEPGPERIWYVGDAFAQGFTLDEVHGLTRIDPWFLAQIKEIVDIELA 477

Query: 561  LLTQSVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAE 620
            L  ++++++     +E+KRRGFSD+++AF   S+E EVR+ R  L V P YKRVDTCAAE
Sbjct: 478  LEQKTLADLDYATLWELKRRGFSDRRLAFLLDSSESEVRKLRHQLNVRPVYKRVDTCAAE 537

Query: 621  FEANTPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYET 680
            F  NT YMYS+Y+ ECES PT +KK+++LGGGPNRIGQGIEFDYCC H + +L+  GYET
Sbjct: 538  FATNTAYMYSTYEEECESQPTDRKKIIVLGGGPNRIGQGIEFDYCCVHAALALREDGYET 597

Query: 681  IMMNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQ 740
            IM+N NPETVSTDYDTSDRLYFEPLT+EDVL ++  E P G+IVQ+GGQTPLKL+     
Sbjct: 598  IMVNCNPETVSTDYDTSDRLYFEPLTLEDVLEIVHKENPVGMIVQYGGQTPLKLA----- 652

Query: 741  YLDEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALA 800
                 R   A+G   V I GTSP+SID AEDRERF  ++ +L + QP    A++EA+ALA
Sbjct: 653  -----RALEANG---VPIIGTSPESIDVAEDRERFQKLLNKLGLRQPPNRTARTEAEALA 704

Query: 801  IAKEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEID 860
             A EIGYP+VVRPSYVLGGRAMEIV+  + L  Y+  AV+V  + PVL+D++L+DA E+D
Sbjct: 705  HASEIGYPLVVRPSYVLGGRAMEIVHEQQDLERYMREAVKVSNDSPVLLDRFLNDATEVD 764

Query: 861  VDALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNV 920
            VD LAD    V IGG+MEHIEQAGVHSGDSAC +P  ++S+  +  I   T  +AK LNV
Sbjct: 765  VDCLADG-QTVFIGGVMEHIEQAGVHSGDSACSLPPYSLSAEVIAEIKRQTTMMAKALNV 823

Query: 921  CGLMNCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTK 980
             GLMN Q+AI   GDVY+LE NPRASRTVP+VSKA G  LAK AA  M+G++L D G T+
Sbjct: 824  SGLMNVQFAI-QGGDVYVLEVNPRASRTVPYVSKATGLQLAKIAARAMAGRTLADQGITR 882

Query: 981  EVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPL 1040
            EV+P + SVKEAV PF KF G D +LGPEM+STGEVMG+  SF  AF K+Q+AAG +LP 
Sbjct: 883  EVVPPYFSVKEAVFPFVKFPGVDTILGPEMKSTGEVMGVGNSFGEAFVKSQLAAGVRLPD 942

Query: 1041 SGTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHA 1100
            SGTVF+S+ +  KP    +A+   ++GFK+V+T GTA  +E  GI V+ V K+ EGRPH 
Sbjct: 943  SGTVFISVRNQDKPRAVEVARGLHNLGFKLVATRGTAAEIEAAGIPVQVVNKVTEGRPHI 1002

Query: 1101 GDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLK 1158
             DMV NG++ +++ T         D   +R + LA ++   TT++GA A  E ++ ++
Sbjct: 1003 VDMVKNGEVSLVINTVEERRNAIADSRTIRTQALANRITFFTTIAGARAAVEGMQFMR 1060


>gi|383311360|ref|YP_005364170.1| carbamoyl phosphate synthase large subunit [Pasteurella multocida
            subsp. multocida str. HN06]
 gi|386835378|ref|YP_006240696.1| carbamoyl-phosphate synthase large subunit [Pasteurella multocida
            subsp. multocida str. 3480]
 gi|380872632|gb|AFF24999.1| carbamoyl phosphate synthase large subunit [Pasteurella multocida
            subsp. multocida str. HN06]
 gi|385202082|gb|AFI46937.1| carbamoyl-phosphate synthase, large subunit [Pasteurella multocida
            subsp. multocida str. 3480]
          Length = 1068

 Score = 1276 bits (3302), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 639/1084 (58%), Positives = 813/1084 (75%), Gaps = 24/1084 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILI+GAGPIVIGQACEFDYSG QACKAL+EEGY+V+L+NSNPATIMTDP +AD
Sbjct: 3    KRTDIKTILIIGAGPIVIGQACEFDYSGAQACKALREEGYKVVLVNSNPATIMTDPDMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+    VE+++EKERPDA+LPTMGGQTALN A+ L+++G L+KY VELIGAK DA
Sbjct: 63   VTYIEPIEWRTVEKIIEKERPDAILPTMGGQTALNCALDLSKNGVLKKYNVELIGAKEDA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  FK+AM+ IG+ TP S + +TL+E  +   E+G FP +IRP+FT+GG+GGGI
Sbjct: 123  IDKAEDRGRFKEAMEKIGLSTPKSFVCHTLEEAWAAQAEVG-FPTLIRPSFTMGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYNK+EF AIC+ G  AS T ++L+E+S+LGWKEYE+EV+RD ADN +I+CSIEN DPMG
Sbjct: 182  AYNKDEFYAICERGFDASPTHELLIEQSVLGWKEYEMEVVRDKADNCIIVCSIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ +R+ SIA++REIGV+ GGSNVQFA+NP +GE++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQIMRNASIAVLREIGVDTGGSNVQFAINPENGEMIVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKK-TPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+L+++ NDIT    PASFEPSIDYVVTK+PR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGYTLNELRNDITGGLIPASFEPSIDYVVTKVPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            FAFEKFP ++  LTTQMKSVGE MA+GRTFQES QKALR LE G  G+       +  + 
Sbjct: 362  FAFEKFPQADDRLTTQMKSVGEVMAMGRTFQESLQKALRGLETGICGFNL-----MSEEP 416

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
            E+++  L  P P R+  +  A   G  +DE+H  S ID WFL Q ++L+  E  L  +++
Sbjct: 417  EKIRQELGNPGPIRILYVADAFGAGFTLDEVHHYSKIDPWFLIQIQDLVLEELALEKRTL 476

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
             ++   +   +KR+GFSDK+IA  TKS E  VR KR+SL + P YKRVDTCA EF ++T 
Sbjct: 477  DDLDYAELRRLKRKGFSDKRIAQLTKSAESAVRNKRVSLNLHPVYKRVDTCAGEFTSDTA 536

Query: 627  YMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSN 686
            Y+YS+Y+ ECES P+ KKK++ILGGGPNRIGQGIEFDYCC H S +L+ AG+ETIM+N N
Sbjct: 537  YLYSTYEEECESRPSDKKKIMILGGGPNRIGQGIEFDYCCVHASLALREAGFETIMVNCN 596

Query: 687  PETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHR 746
            PETVSTD+DTSDRLYFEPLT+EDVL +I +E+P G+IV +GGQTPLKL+  +H       
Sbjct: 597  PETVSTDFDTSDRLYFEPLTLEDVLEIIHVEKPHGVIVHYGGQTPLKLANDLH------- 649

Query: 747  LPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEIG 806
               A+G   V I GTS DSIDAAEDRERF  I+ +L ++QP    A++  +A+ +A+E+G
Sbjct: 650  ---ANG---VNIIGTSADSIDAAEDRERFQQILHKLHLKQPTNRTARNAEEAVKLAEEVG 703

Query: 807  YPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALAD 866
            YP+VVRPSYVLGGRAM+IVY  + L  Y+  AV V  + P+L+D +L++AIE+DVD + D
Sbjct: 704  YPLVVRPSYVLGGRAMQIVYNVDELQRYMREAVSVSNDSPILLDHFLNNAIEVDVDCICD 763

Query: 867  SCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNC 926
                VVIGGIM+HIEQAG+HSGDSAC +P  ++S    D I   T ++A  L V GLMN 
Sbjct: 764  G-AEVVIGGIMQHIEQAGIHSGDSACSLPPYSLSQEVQDEIRRQTAEMAFALGVKGLMNV 822

Query: 927  QYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPKH 986
            Q+A+   G +Y+LE NPRASRTVPFVSKA G PLAK AA VM+G+SL   G   EVIP  
Sbjct: 823  QFAV-QDGVIYVLEVNPRASRTVPFVSKATGRPLAKIAARVMAGESLKAQGIQGEVIPPF 881

Query: 987  VSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVFL 1046
             SVKEAV PF KF G D +LGPEMRSTGEVMG+  +F  AF KAQ+ A +++P +G VFL
Sbjct: 882  YSVKEAVFPFIKFPGVDTVLGPEMRSTGEVMGVGATFAEAFLKAQLGANERIPKTGKVFL 941

Query: 1047 SLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVAN 1106
            S+ND  KP L  IA+   + G+ + +T GTA FL   G+AV+ + K+ EGRP+  D + N
Sbjct: 942  SVNDADKPRLLPIARQLQESGYGLCATLGTAKFLREHGVAVQIINKVREGRPNIVDAIKN 1001

Query: 1107 GQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTVTMTA 1166
            G+I M++ T SG +    DG  +RR  L  KV + TT++GA A A ++  L  + V   +
Sbjct: 1002 GEIAMVINTVSGLAETVTDGHAIRRSALQQKVFLQTTLAGAEALAGSVEYLADSEV--YS 1059

Query: 1167 LQDF 1170
            LQD 
Sbjct: 1060 LQDL 1063


>gi|399116661|emb|CCG19469.1| carbamoyl-phosphate synthase large chain [Taylorella asinigenitalis
            14/45]
          Length = 1081

 Score = 1276 bits (3302), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 636/1078 (58%), Positives = 813/1078 (75%), Gaps = 27/1078 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTDL+ ILI+GAGPIVIGQACEFDYSG QACKALK +GY  IL+NSNPATIMTDP  AD
Sbjct: 3    KRTDLKSILIIGAGPIVIGQACEFDYSGAQACKALKADGYRTILVNSNPATIMTDPDTAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
              YI P+T + +E+V+E E+PDA+LPTMGGQTALN A+ L++ G LEK+GVELIGA   A
Sbjct: 63   VIYIEPITWKSLEKVIEIEKPDAILPTMGGQTALNCALELSKKGVLEKHGVELIGANAQA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECIS----IANEIGE--FPLIIRPAFTLG 261
            I+KAEDR  FK+AM +IG+++  SGI ++++E       IA EIG   FP++IRP+FTLG
Sbjct: 123  IEKAEDRMKFKEAMSSIGLESAKSGIAHSMEEAWEVQRRIAEEIGTAGFPVVIRPSFTLG 182

Query: 262  GTGGGIAYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIE 321
            GTGGGIAYN EEFE IC  GL AS T+++L+E+SLLGWKE+E+EV+RD ADN +IICSIE
Sbjct: 183  GTGGGIAYNPEEFEEICTRGLEASPTNELLIEESLLGWKEFEMEVIRDKADNCIIICSIE 242

Query: 322  NVDPMGVHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEV 381
            N+DPMGVHTGDSITVAPAQTLTDKEYQ +RD SIA++REIGV+ GGSNVQFAVNP +G +
Sbjct: 243  NLDPMGVHTGDSITVAPAQTLTDKEYQIMRDASIAVLREIGVDTGGSNVQFAVNPENGRM 302

Query: 382  MVIEMNPRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYV 440
            +VIEMNPRVSRSSALASKATGFPIAK+A++L+VGY+LD++ N+IT   TPASFEP++DYV
Sbjct: 303  IVIEMNPRVSRSSALASKATGFPIAKVASRLAVGYTLDELSNEITGGATPASFEPTLDYV 362

Query: 441  VTKIPRFAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVK 500
            VTKIPRFAFEKFP ++  LTTQMKSVGE MA+GRTF+ESFQKALR LE G  G     V 
Sbjct: 363  VTKIPRFAFEKFPQADSRLTTQMKSVGEVMAIGRTFKESFQKALRGLEVGVDGLNLKTV- 421

Query: 501  ELDWDWEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQF 560
                D E+L+  L  P P+R+  +  A  +G  ++++H L+ ID WFL Q KE++D+E  
Sbjct: 422  ----DLEKLQVELAEPGPERIWFVADAFDRGFSIEDVHRLTKIDLWFLEQIKEIVDIELA 477

Query: 561  LLTQSVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAE 620
            L  +++ ++  +    +KR GFSD+++A+   ++E E+R+ R+  GV P YKRVDTCAAE
Sbjct: 478  LEQKTLGDIDAEIMRLLKREGFSDRRLAYLLDTSESEIRKIRIQQGVRPVYKRVDTCAAE 537

Query: 621  FEANTPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYET 680
            F+  T YMYS+Y+ E E+ PT KKK+++LGGGPNRIGQGIEFDYCC H + SL+S GYET
Sbjct: 538  FDTKTAYMYSTYEEESEALPTNKKKIMVLGGGPNRIGQGIEFDYCCVHAALSLKSDGYET 597

Query: 681  IMMNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQ 740
            IM+N NPETVSTDYDT+DRLYFEPLT+EDVL ++++E+P G+IVQ+GGQTPLKL+     
Sbjct: 598  IMVNCNPETVSTDYDTADRLYFEPLTLEDVLEIVEVEKPVGVIVQYGGQTPLKLA----S 653

Query: 741  YLDEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALA 800
             L+ + +P         I GTSP+SID AEDRERF  ++++L+++QP    A++E +AL 
Sbjct: 654  DLELNGVP---------ILGTSPESIDIAEDRERFQKLLQKLNLKQPPNRTARTEEEALT 704

Query: 801  IAKEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEID 860
            +A EIGYP+VVRPSYVLGGRAMEIV+    L  Y+  AV+V  + PVL+D+YL+DAIEID
Sbjct: 705  LANEIGYPLVVRPSYVLGGRAMEIVHDQMDLERYMTAAVKVSNDSPVLLDRYLNDAIEID 764

Query: 861  VDALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNV 920
            VD + D   +V + G+MEHIEQAGVHSGDSAC +P  +++   ++ I   T  +AK LNV
Sbjct: 765  VDCICDGT-DVYVAGVMEHIEQAGVHSGDSACSLPPHSLTKEMIEEIKRQTRLMAKALNV 823

Query: 921  CGLMNCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTK 980
             GLMN Q+AI  + +VY+LE NPRASRTVPFVSKA G P+AK AA VM+GKSL DLG T+
Sbjct: 824  RGLMNVQFAI-QANEVYVLEVNPRASRTVPFVSKATGLPVAKIAARVMAGKSLKDLGVTE 882

Query: 981  EVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPL 1040
            E  PK   VKEAV PF KF G D +LGPEM+STGEVMG+  +F  AF K+QIAAG  LP 
Sbjct: 883  EKSPKLYCVKEAVFPFAKFPGVDTILGPEMKSTGEVMGVGETFGEAFVKSQIAAGIDLPK 942

Query: 1041 SGTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHA 1100
            +G VFLS+ D  KP +  IAK  LD+GFKI +T GTA  +   GI V+ V K+ EGRPH 
Sbjct: 943  AGLVFLSVKDSDKPKIIPIAKGLLDLGFKICATRGTASAIYEAGIPVQVVNKVTEGRPHI 1002

Query: 1101 GDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLK 1158
             DM+ NG++ +++ T         D   +R   L+ +V   TT++ A A  E ++ L+
Sbjct: 1003 VDMLKNGELNLVINTVEEKRNAINDSRSIRTNALSARVTAYTTIAEASAAVEGLKYLR 1060


>gi|431929751|ref|YP_007242797.1| carbamoyl-phosphate synthase large subunit [Thioflavicoccus mobilis
            8321]
 gi|431828054|gb|AGA89167.1| carbamoyl-phosphate synthase, large subunit [Thioflavicoccus mobilis
            8321]
          Length = 1068

 Score = 1276 bits (3302), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 642/1089 (58%), Positives = 801/1089 (73%), Gaps = 28/1089 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD+  ILI+GAGPIVIGQACEFDYSG QACKAL+EEGY V+L+NSNPATIMTDP +AD
Sbjct: 3    KRTDIHSILIIGAGPIVIGQACEFDYSGAQACKALREEGYRVVLVNSNPATIMTDPEMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+T   +E+++E+ERPDALLPTMGGQTALN A+ L   G LE+YGVELIGA  +A
Sbjct: 63   ATYIEPVTWRTLERIIERERPDALLPTMGGQTALNCALDLVRQGVLERYGVELIGASREA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDRDLF+QAM+ IG+  P S + ++L+E   +   IG FP IIRP+FTLGG+GGGI
Sbjct: 123  IDKAEDRDLFRQAMRRIGLDLPRSAMAHSLEEAYQVQPSIG-FPCIIRPSFTLGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN EEF+ IC+ GL  S TS++L+E+S LGWKE+E+EV+RD  DN +IICSIEN+DPMG
Sbjct: 182  AYNLEEFDEICRGGLDLSPTSELLIEESALGWKEFEMEVVRDRKDNCIIICSIENLDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ +RD SIA++REIGV+ GGSNVQFA+NP DG +++IEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQIMRDASIAVLREIGVDTGGSNVQFAINPADGRMIIIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT   TPASFEP+IDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKIAAKLAVGYTLDELRNDITGGATPASFEPTIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWG----CSNVKEL 502
            FAFEKFP +   LTTQMKSVGEAMALGRTFQES QKA+RSLE    G       S  + L
Sbjct: 362  FAFEKFPQAIARLTTQMKSVGEAMALGRTFQESLQKAIRSLETDRHGLAEMVDLSTPEAL 421

Query: 503  DWDWEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLL 562
            D    +++  +R    +R+  +  A + G+ ++EI  LS ID WFL Q ++LI  E+   
Sbjct: 422  D----KVRLEVRQTGAERIFYVGDAFRAGLALEEIQALSGIDPWFLAQIEDLIAEERATQ 477

Query: 563  TQSVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFE 622
                + +T +    +KR+GFSD++++  T   E EVR++R  LGV P +KRVDTCAAEF 
Sbjct: 478  ASGPAGLTAERLRALKRKGFSDRRLSELTGLGEAEVRDRRWQLGVRPVFKRVDTCAAEFA 537

Query: 623  ANTPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIM 682
              T Y+YS+Y+ ECE+AP+ ++K+++LGGGPNRIGQGIEFDYCC H + +++  GYETIM
Sbjct: 538  TGTAYLYSTYEEECEAAPSDREKIMVLGGGPNRIGQGIEFDYCCVHAALAMREDGYETIM 597

Query: 683  MNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYL 742
            +N NPETVSTDYDTSDRLYFEPL +EDVL ++D ERP G+IVQ+GGQTPLKL+       
Sbjct: 598  VNCNPETVSTDYDTSDRLYFEPLALEDVLEIVDKERPRGVIVQYGGQTPLKLA------- 650

Query: 743  DEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIA 802
               R   A+G   V I GT+PDSID AEDRERF  +I  L + QP    A+SEA+A  +A
Sbjct: 651  ---RALEAAG---VPIIGTTPDSIDLAEDRERFQQMINRLGLRQPPNTTARSEAEAKRLA 704

Query: 803  KEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVD 862
              IGYP+VVRPSYVLGGRAME+V+ +  L  Y+ +AV V    PVL+D++L DAIE+DVD
Sbjct: 705  AGIGYPLVVRPSYVLGGRAMEVVFDEADLERYMRDAVRVSNASPVLLDRFLDDAIEVDVD 764

Query: 863  ALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCG 922
            A+ D   +V+IGGIMEHIEQAGVHSGDSAC +P  T+S +  D +     K+A+ L V G
Sbjct: 765  AVCDG-QDVLIGGIMEHIEQAGVHSGDSACSLPPYTLSPAIQDRMREQMAKMARALEVVG 823

Query: 923  LMNCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEV 982
            LMN Q+AI    +VY+LE NPRASRTVPFVSKAIG PLAK AA  M+GKSL D G T E 
Sbjct: 824  LMNAQFAIQAD-EVYILEVNPRASRTVPFVSKAIGIPLAKVAARCMAGKSLRDQGLTSEC 882

Query: 983  IPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSG 1042
             PKH  VKEAV PF KF G D +LGPEM+STGEVMG+  SF  A+AKAQ  AG +LP  G
Sbjct: 883  KPKHYFVKEAVFPFIKFPGVDTVLGPEMKSTGEVMGVGESFGEAYAKAQEGAGSRLPAKG 942

Query: 1043 TVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGD 1102
               LS+ D  K  L R+A+  LD+GF +  T GTA  L   GI  E V K+ EGRPH  D
Sbjct: 943  KAMLSVRDADKRRLVRVAQDLLDLGFALYGTHGTAEALRANGIPCEGVNKVKEGRPHIVD 1002

Query: 1103 MVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTV 1162
            M+ N ++  +V T+ G ++   D  ++RR  L  KV   TT++GA A   A++ L  + +
Sbjct: 1003 MIKNREVSFIVNTTEG-AVAIADSAEIRRAALQQKVSYTTTIAGAEATCLALKQL--DIL 1059

Query: 1163 TMTALQDFF 1171
            ++  LQD +
Sbjct: 1060 SVNRLQDLY 1068


>gi|359795519|ref|ZP_09298138.1| carbamoyl phosphate synthase large subunit [Achromobacter
            arsenitoxydans SY8]
 gi|359366576|gb|EHK68254.1| carbamoyl phosphate synthase large subunit [Achromobacter
            arsenitoxydans SY8]
          Length = 1079

 Score = 1276 bits (3301), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 645/1078 (59%), Positives = 814/1078 (75%), Gaps = 27/1078 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTDL+ ILI+GAGPI+IGQACEFDYSG QACKALK EGY  IL+NSNPATIMTDP  AD
Sbjct: 3    KRTDLKSILIIGAGPIIIGQACEFDYSGAQACKALKAEGYRTILVNSNPATIMTDPETAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+T + VE+++E+E+PDALLPTMGGQTALN A+ LA  G L+K+ VELIGA   A
Sbjct: 63   VTYIEPITWQAVEKIIEREKPDALLPTMGGQTALNCALDLAHHGVLKKHNVELIGANEHA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECIS----IANEIGE--FPLIIRPAFTLG 261
            I+KAEDR  FKQAM  IG+++  SG+ +++DE       IA E+G   FP +IRP+FT+G
Sbjct: 123  IEKAEDRQKFKQAMTDIGLESAKSGVAHSMDEAWEVQRRIAAEVGTSGFPAVIRPSFTMG 182

Query: 262  GTGGGIAYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIE 321
            G+GGGIAYN EEFE IC+ GL AS TS++L+E+SLLGWKE+E+EV+RD ADN +I+CSIE
Sbjct: 183  GSGGGIAYNAEEFETICRRGLEASPTSELLIEESLLGWKEFEMEVVRDKADNCIIVCSIE 242

Query: 322  NVDPMGVHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEV 381
            N+DPMGVHTGDSITVAPAQTLTDKEYQ +R+ SIA++REIGV+ GGSNVQFAVNP +G +
Sbjct: 243  NLDPMGVHTGDSITVAPAQTLTDKEYQIMRNASIAVLREIGVDTGGSNVQFAVNPKNGRM 302

Query: 382  MVIEMNPRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITK-KTPASFEPSIDYV 440
            +VIEMNPRVSRSSALASKATGFPIAK+AA+L+VGY+LD++ N+IT   TPASFEPSIDYV
Sbjct: 303  IVIEMNPRVSRSSALASKATGFPIAKVAARLAVGYTLDELKNEITGGATPASFEPSIDYV 362

Query: 441  VTKIPRFAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVK 500
            VTK+PRFAFEKFP ++  LTTQMKSVGE MA+GRTFQESFQKALR LE G  G     + 
Sbjct: 363  VTKVPRFAFEKFPTADARLTTQMKSVGEVMAIGRTFQESFQKALRGLEVGVDG-----LN 417

Query: 501  ELDWDWEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQF 560
            +   D E+L+  L  P P+R+  +  A  +G  +DE+H ++ ID WFL+Q KE++D+E  
Sbjct: 418  QKTTDREKLQVELGEPGPERIWYVGDAFAQGFSLDEVHNITHIDPWFLSQIKEIVDIELA 477

Query: 561  LLTQSVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAE 620
            L  ++++++     +E+KRRGFSD+++AF   S+E EVR+ R  L V P YKRVDTCAAE
Sbjct: 478  LEQKTLADLDYATLWELKRRGFSDRRLAFLLDSSESEVRKLRHQLNVRPVYKRVDTCAAE 537

Query: 621  FEANTPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYET 680
            F   T YMYS+Y+ ECE+APT +KK+++LGGGPNRIGQGIEFDYCC H + +L+  GYET
Sbjct: 538  FATRTAYMYSTYEEECEAAPTDRKKIVVLGGGPNRIGQGIEFDYCCVHAALALRDDGYET 597

Query: 681  IMMNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQ 740
            IM+N NPETVSTDYDTSDRLYFEPLT+EDVL ++  E P G+IVQ+GGQTPLKL+     
Sbjct: 598  IMVNCNPETVSTDYDTSDRLYFEPLTLEDVLEIVHKENPVGMIVQYGGQTPLKLA----- 652

Query: 741  YLDEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALA 800
                 R   A+G   V I GTSP+SID AEDRERF  ++ +L + QP    A++E +ALA
Sbjct: 653  -----RALEANG---VPIIGTSPESIDVAEDRERFQKLLNKLGLRQPPNRTARTEGEALA 704

Query: 801  IAKEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEID 860
             A EIGYP+VVRPSYVLGGRAMEIV+  + L  Y+  AV+V  + PVL+D++L++A E+D
Sbjct: 705  HAAEIGYPLVVRPSYVLGGRAMEIVHEQQDLERYMREAVKVSNDSPVLLDRFLNNATEVD 764

Query: 861  VDALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNV 920
            VD LAD    V IGG+MEHIEQAGVHSGDSAC +P  ++S+  +  I   T  +AK LNV
Sbjct: 765  VDCLADG-ETVFIGGVMEHIEQAGVHSGDSACSLPPYSLSAEVIAEIKRQTTMMAKALNV 823

Query: 921  CGLMNCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTK 980
             GLMN Q+AI   GDVY+LE NPRASRTVP+VSKA G  LAK AA  M+G++L   G TK
Sbjct: 824  SGLMNVQFAI-QGGDVYVLEVNPRASRTVPYVSKATGLQLAKIAARAMAGQTLAAQGITK 882

Query: 981  EVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPL 1040
            EV+P + SVKEAV PF KF G D +LGPEM+STGEVMG+ MSF  AF K+Q+AA  +LP 
Sbjct: 883  EVVPPYFSVKEAVFPFVKFPGVDTILGPEMKSTGEVMGVGMSFGEAFVKSQLAASVRLPE 942

Query: 1041 SGTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHA 1100
            SGTVF+S+ +  KP    +A+    +GFK+V+T GTA  +E  GI V+ V K++EGRPH 
Sbjct: 943  SGTVFISVKNQDKPRAVEVARGLHTLGFKLVATRGTAAEIEAAGIPVQVVNKVNEGRPHI 1002

Query: 1101 GDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLK 1158
             DMV NG+I +++ T         D   +R + LA +V   TT++GA A  E ++ L+
Sbjct: 1003 VDMVKNGEISLVINTVEERRNAIADSRTIRTQALAARVTFFTTIAGARAAVEGMQYLR 1060


>gi|425064227|ref|ZP_18467352.1| Carbamoyl-phosphate synthase large chain [Pasteurella multocida
            subsp. gallicida X73]
 gi|404381401|gb|EJZ77875.1| Carbamoyl-phosphate synthase large chain [Pasteurella multocida
            subsp. gallicida X73]
          Length = 1068

 Score = 1276 bits (3301), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 639/1084 (58%), Positives = 812/1084 (74%), Gaps = 24/1084 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD+  ILI+GAGPIVIGQACEFDYSG QACKAL+EEGY+V+L+NSNPATIMTDP +AD
Sbjct: 3    KRTDINTILIIGAGPIVIGQACEFDYSGAQACKALREEGYKVVLVNSNPATIMTDPDMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+    VE+++EKERPDA+LPTMGGQTALN A+ L+++G L+KY VELIGAK DA
Sbjct: 63   VTYIEPIEWRTVEKIIEKERPDAILPTMGGQTALNCALDLSKNGVLKKYNVELIGAKEDA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  FK+AM+ IG+ TP S + +TL+E  +   E+G FP +IRP+FT+GG+GGGI
Sbjct: 123  IDKAEDRGRFKEAMEKIGLSTPKSFVCHTLEEAWAAQAEVG-FPTLIRPSFTMGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYNK+EF AIC+ G  AS T ++L+E+S+LGWKEYE+EV+RD ADN +I+CSIEN DPMG
Sbjct: 182  AYNKDEFYAICERGFDASPTHELLIEQSVLGWKEYEMEVVRDKADNCIIVCSIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ +R+ SIA++REIGV+ GGSNVQFA+NP +GE++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQIMRNASIAVLREIGVDTGGSNVQFAINPENGEMIVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKK-TPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+L+++ NDIT    PASFEPSIDYVVTK+PR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGYTLNELRNDITGGLIPASFEPSIDYVVTKVPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            FAFEKFP ++  LTTQMKSVGE MA+GRTFQES QKALR LE G  G+       +  + 
Sbjct: 362  FAFEKFPQADDRLTTQMKSVGEVMAMGRTFQESLQKALRGLETGICGFNL-----MSEEP 416

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
            E+++  L  P P R+  +  A   G  +DE+H  S ID WFL Q ++L+  E  L  +++
Sbjct: 417  EKIRQELGNPGPIRILYVADAFGAGFTLDEVHHYSKIDPWFLIQIQDLVLEELALEKRTL 476

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
            + +   +   +KR+GFSDK+IA  TKS E  VR KR+SL + P YKRVDTCA EF ++T 
Sbjct: 477  AELDYAELRRLKRKGFSDKRIAQLTKSEESAVRNKRVSLNLHPVYKRVDTCAGEFTSDTA 536

Query: 627  YMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSN 686
            Y+YS+Y+ ECES P+ KKK++ILGGGPNRIGQGIEFDYCC H S +L+ AG+ETIM+N N
Sbjct: 537  YLYSTYEEECESRPSDKKKIMILGGGPNRIGQGIEFDYCCVHASLALREAGFETIMVNCN 596

Query: 687  PETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHR 746
            PETVSTD+DTSDRLYFEPLT+EDVL +I +E+P G+IV +GGQTPLKL+  +H       
Sbjct: 597  PETVSTDFDTSDRLYFEPLTLEDVLEIIHVEKPHGVIVHYGGQTPLKLANDLH------- 649

Query: 747  LPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEIG 806
               A+G   V I GTS DSIDAAEDRERF  I+ +L ++QP    A++  +A+ +A+E+G
Sbjct: 650  ---ANG---VNIIGTSADSIDAAEDRERFQQILHKLHLKQPTNRTARNAEEAVKLAEEVG 703

Query: 807  YPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALAD 866
            YP+VVRPSYVLGGRAM+IVY  + L  Y+  AV V  + P+L+D +L++AIE+DVD + D
Sbjct: 704  YPLVVRPSYVLGGRAMQIVYNVDELQRYMREAVSVSNDSPILLDHFLNNAIEVDVDCICD 763

Query: 867  SCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNC 926
                VVIGGIM+HIEQAG+HSGDSAC +P  ++S    D I   T ++A  L V GLMN 
Sbjct: 764  G-AEVVIGGIMQHIEQAGIHSGDSACSLPPYSLSQEVQDEIRRQTAEMAFALGVKGLMNV 822

Query: 927  QYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPKH 986
            Q+A+   G +Y+LE NPRASRTVPFVSKA G PLAK AA VM+G+SL   G   EVIP  
Sbjct: 823  QFAV-QDGVIYVLEVNPRASRTVPFVSKATGRPLAKIAARVMAGESLKAQGIQGEVIPPF 881

Query: 987  VSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVFL 1046
             SVKEAV PF KF G D +LGPEMRSTGEVMG+  +F  AF KAQ+ A +++P +G VFL
Sbjct: 882  YSVKEAVFPFIKFPGVDTVLGPEMRSTGEVMGVGTTFAEAFLKAQLGANERIPKTGKVFL 941

Query: 1047 SLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVAN 1106
            S+ND  KP L  IA+   + G+ + +T GTA FL   G+AV+ + K+ EGRP+  D + N
Sbjct: 942  SVNDADKPRLLPIARQLQESGYGLCATLGTAKFLREHGVAVQIINKVREGRPNIVDAIKN 1001

Query: 1107 GQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTVTMTA 1166
            G+I M++ T SG +    DG  +RR  L  KV + TT++GA A A ++  L  + V   +
Sbjct: 1002 GEIAMVINTVSGLAETVTDGHAIRRSALQQKVFLQTTLAGAEALAGSVEYLADSEV--YS 1059

Query: 1167 LQDF 1170
            LQD 
Sbjct: 1060 LQDL 1063


>gi|226946317|ref|YP_002801390.1| carbamoyl phosphate synthase large subunit [Azotobacter vinelandii
            DJ]
 gi|226721244|gb|ACO80415.1| Carbamoyl-phosphate synthase, large subunit, glutamine-dependent
            [Azotobacter vinelandii DJ]
          Length = 1073

 Score = 1275 bits (3300), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 628/1088 (57%), Positives = 813/1088 (74%), Gaps = 28/1088 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILILGAGPIVIGQACEFDYSG QACKALKEEG+ VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIKSILILGAGPIVIGQACEFDYSGAQACKALKEEGFRVILVNSNPATIMTDPTMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  + V +++EKERPDALLPTMGGQTALN A+AL + G L K+GVE+IGA  D 
Sbjct: 63   ATYIEPIKWQTVAKIIEKERPDALLPTMGGQTALNCALALEKHGVLTKFGVEMIGANADT 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  F +AM+ IG++ P SGI +++DE   + +++G FP IIRP+FT+GGTGGGI
Sbjct: 123  IDKAEDRSRFDKAMRAIGLECPRSGIAHSMDEAYGVLDKVG-FPCIIRPSFTMGGTGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEFE IC  GL  S TS++L+++SL+GWKEYE+EV+RD  DN +I+CSIEN DPMG
Sbjct: 182  AYNREEFEEICTRGLDLSPTSELLIDESLIGWKEYEMEVVRDKKDNCIIVCSIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGVE GGSNVQF +NPVDG ++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQIMRNASLAVLREIGVETGGSNVQFGINPVDGRMVVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT  +TPASFEP+IDYVVTK+PR
Sbjct: 302  PRVSRSSALASKATGFPIAKIAAKLAVGYTLDELSNDITGGRTPASFEPAIDYVVTKVPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            FAFEKFP ++  LTTQMKSVGE MA+GRTFQES QKALR LE G SG+      +LD   
Sbjct: 362  FAFEKFPKADARLTTQMKSVGEVMAIGRTFQESVQKALRGLEVGVSGFD----PKLDPGN 417

Query: 507  EQ----LKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLL 562
             +    LK  L VP  +R+  +  A + G  VD++  ++ ID WFL Q ++L+  E+ + 
Sbjct: 418  PEAGSILKRELTVPGAERIWYVADAFRAGKSVDDVFAMTRIDPWFLVQIEDLVKEEERVK 477

Query: 563  TQSVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFE 622
            T  +S++ ++  + +KR+GFSD ++A     TEK +R  R  L V P YKRVDTCAAEF 
Sbjct: 478  TLGLSSIDRNLMWRLKRKGFSDARLAKLLGVTEKNLRSHRQKLKVQPVYKRVDTCAAEFA 537

Query: 623  ANTPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIM 682
            ++T YMYS+Y+ ECE+ P+ + K++++GGGPNRIGQGIEFDYCC H + +++  GYETIM
Sbjct: 538  SDTAYMYSTYEEECEAKPSSRDKIMVIGGGPNRIGQGIEFDYCCVHAALAMREDGYETIM 597

Query: 683  MNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYL 742
            +N NPETVSTDYDTSDRLYFEP+T+EDVL ++ +E+P+G+IVQ+GGQTPLK    I + L
Sbjct: 598  VNCNPETVSTDYDTSDRLYFEPVTLEDVLEIVRVEQPKGVIVQYGGQTPLK----ICRAL 653

Query: 743  DEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIA 802
            +E  +P         I GTSPD+ID AEDRERF  +++ L++ QP    A+SE +A+A +
Sbjct: 654  EEAGVP---------IIGTSPDAIDRAEDRERFQHMVERLNLRQPPNATARSEDEAIAAS 704

Query: 803  KEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVD 862
            K IGYP+VVRPSYVLGGRAMEIVY ++ L  Y+  AV+V  + PVL+D +L+ AIE+D+D
Sbjct: 705  KAIGYPLVVRPSYVLGGRAMEIVYEEDELKRYMREAVQVSNDSPVLLDHFLNCAIEVDID 764

Query: 863  ALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCG 922
            A+ D   +VVIG IM+HIEQAGVHSGDSAC +P  ++ +   D I     K+A  L V G
Sbjct: 765  AVCDG-EDVVIGAIMQHIEQAGVHSGDSACSLPPYSLPAHIQDDIREQVKKMALELGVVG 823

Query: 923  LMNCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEV 982
            LMN Q A+    D+Y+LE NPRASRTVPFVSK IG  LAK AA VM+GK+L ++GFT+E+
Sbjct: 824  LMNVQMAVQGE-DIYVLEVNPRASRTVPFVSKCIGQSLAKIAARVMAGKTLKEIGFTREI 882

Query: 983  IPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSG 1042
            IP + SVKEAV PF KF G D +LGPEM+STGEVMG+  SF  AFAKAQ+ A + LP  G
Sbjct: 883  IPTYFSVKEAVFPFAKFPGVDPILGPEMKSTGEVMGVGDSFAEAFAKAQLGASETLPAGG 942

Query: 1043 TVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGD 1102
              F+S+ +  KP +  +A+  + +GF++V+T+GTA  +E  G+ V RV K+ EGRPH  D
Sbjct: 943  CAFISVREDDKPFVAEVARNLVALGFEVVATAGTARIIEAAGLPVRRVNKVTEGRPHVVD 1002

Query: 1103 MVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTV 1162
            M+ N ++ +++ T+ G      D   +RR  L +K+ + TT++G  A  EA+R     TV
Sbjct: 1003 MIKNDEVTLIINTTEGRQ-SIADSFSIRRNALQHKICITTTIAGGQAICEALRFGPEKTV 1061

Query: 1163 TMTALQDF 1170
                LQD 
Sbjct: 1062 RR--LQDL 1067


>gi|344207281|ref|YP_004792422.1| carbamoyl-phosphate synthase large subunit [Stenotrophomonas
            maltophilia JV3]
 gi|343778643|gb|AEM51196.1| carbamoyl-phosphate synthase, large subunit [Stenotrophomonas
            maltophilia JV3]
          Length = 1080

 Score = 1275 bits (3299), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 629/1068 (58%), Positives = 804/1068 (75%), Gaps = 21/1068 (1%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTDL+ ILI+GAGPIVIGQACEFDYSG QACKAL++EGY V+L+NSNPATIMTDP +AD
Sbjct: 3    KRTDLKTILIIGAGPIVIGQACEFDYSGAQACKALRDEGYRVVLVNSNPATIMTDPEMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
              YI P+  + VE+++ KE+PDALLPTMGGQTALN A+ LA++G LEKY VELIGAK +A
Sbjct: 63   AVYIEPINWQTVEKIIAKEKPDALLPTMGGQTALNCALDLADNGVLEKYNVELIGAKREA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I+ AEDR+LF+ AM  IG++ P + + +TLDE + I   +G +P IIRP+FTLGG+GGGI
Sbjct: 123  IRMAEDRELFRVAMGEIGLECPTAAVAHTLDEALEIQTRVG-YPTIIRPSFTLGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EE   I   GL  S T++VLVE+S+LGWKE+E+EV+RD ADN +I+CSIEN+DPMG
Sbjct: 182  AYNREELVEIVSRGLELSPTTEVLVEESVLGWKEFEMEVVRDTADNCIIVCSIENLDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQRLRD SIA++R+IGV+ GGSNVQF +NP  G V+VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQRLRDASIAVLRKIGVDTGGSNVQFGINPKTGRVVVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKK-TPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ N+IT   TPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGYTLDELKNEITGGLTPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVK-ELDWD 505
            FAFEKFP ++  LTTQMKSVGE MA+GRTFQES QKALR LE G  G+  + +    + D
Sbjct: 362  FAFEKFPAADARLTTQMKSVGEVMAMGRTFQESVQKALRGLETGKVGFDPTGLDLANEED 421

Query: 506  WEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQS 565
             + L+  L+ P P+R+  +  A + GM V+EI+ LSFID WFL Q +E+I  E  +    
Sbjct: 422  LQTLRRELKAPGPERLFFVADAFRAGMSVEEIYALSFIDHWFLDQIEEIIAAEADVAAGG 481

Query: 566  VSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANT 625
            +  +      ++KR GFSD ++A  T + E  +R  R +  V P YKRVD+CA EF   T
Sbjct: 482  IDALDAARLRKLKRAGFSDARLAQLTGTNEAAIRALRRAHKVRPVYKRVDSCAGEFSTGT 541

Query: 626  PYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNS 685
             Y+YS+Y+ ECE+AP+ + K++ILGGGPNRIGQGIEFDYCC H + +L+  GYETIM+N 
Sbjct: 542  AYLYSTYEDECEAAPSNRDKIMILGGGPNRIGQGIEFDYCCVHAALALREDGYETIMVNC 601

Query: 686  NPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEH 745
            NPETVSTDYDTSDRLYFEPLT+EDVL +++LE+P+G+IVQ+GGQTPLKL+          
Sbjct: 602  NPETVSTDYDTSDRLYFEPLTLEDVLEIVELEQPKGVIVQYGGQTPLKLA---------- 651

Query: 746  RLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEI 805
            R   A+G   V + GTSPDSID AEDRERF  ++ +L ++QP   IA+++ +AL +A+EI
Sbjct: 652  RALEANG---VPVIGTSPDSIDLAEDRERFQQLVDKLGLKQPPNRIARNDQEALLLAREI 708

Query: 806  GYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALA 865
            GYP+VVRPSYVLGGRAMEIVY +  L  Y+ +AV+V  + PVL+D++L +A+E DVD +A
Sbjct: 709  GYPLVVRPSYVLGGRAMEIVYGEADLARYVRDAVKVSNDSPVLLDRFLDNAVECDVDIIA 768

Query: 866  DSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMN 925
            D+ GNV+IGG+MEHIE+AGVHSGDS+C +P  ++S+     +    ++LAK LNV GLMN
Sbjct: 769  DAQGNVLIGGVMEHIEEAGVHSGDSSCSLPPYSLSAETQAELRRQVVELAKALNVVGLMN 828

Query: 926  CQYAITTSGD----VYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKE 981
             Q+AI TS +    +YLLE NPRASRTVPFVSKA G PLAK AA  M+GK+L + G TKE
Sbjct: 829  TQFAIQTSDEGADTIYLLEVNPRASRTVPFVSKATGMPLAKIAARCMAGKTLAEQGATKE 888

Query: 982  VIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLS 1041
            ++P + SVKEA+ PF KFQG D +LGPEMRSTGEVMG+  +F  AFA+AQ A G K P  
Sbjct: 889  IVPDYYSVKEAIFPFAKFQGVDPILGPEMRSTGEVMGVGRTFNAAFARAQEAGGIKAPPV 948

Query: 1042 GTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAG 1101
            G  F+S+ D  K  +  +AKA L  G+ +V+T GTA +L+  G+  E + K+ EGRPH  
Sbjct: 949  GKAFVSVRDPDKKRVLPVAKALLARGYSLVATRGTAAWLQQHGMDCEIINKVVEGRPHIV 1008

Query: 1102 DMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALA 1149
            D + NG+I  +V T+ G S    D   +RR  L ++V   TT++GA A
Sbjct: 1009 DSIKNGEIVYIVNTTEGRSAIN-DSFSIRREALQHRVTYSTTIAGAKA 1055


>gi|456735748|gb|EMF60474.1| Carbamoyl-phosphate synthase large chain [Stenotrophomonas
            maltophilia EPM1]
          Length = 1080

 Score = 1275 bits (3299), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 633/1071 (59%), Positives = 802/1071 (74%), Gaps = 27/1071 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTDL+ ILI+GAGPIVIGQACEFDYSG QACKAL++EGY V+L+NSNPATIMTDP +AD
Sbjct: 3    KRTDLKTILIIGAGPIVIGQACEFDYSGAQACKALRDEGYRVVLVNSNPATIMTDPEMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
              YI P+  + VE+++ KE+PDALLPTMGGQTALN A+ LA+ G LEKY VELIGAK +A
Sbjct: 63   AVYIEPINWQTVEKIIAKEKPDALLPTMGGQTALNCALDLADHGVLEKYNVELIGAKREA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I+ AEDR+LF+ AM  IG++ P + + +TLDE + I   +G +P IIRP+FTLGG+GGGI
Sbjct: 123  IRMAEDRELFRVAMGEIGLECPTAAVAHTLDEALEIQTRVG-YPTIIRPSFTLGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EE   I   GL  S T++VLVE+S+LGWKE+E+EV+RD ADN +I+CSIEN+DPMG
Sbjct: 182  AYNREELVEIVSRGLELSPTTEVLVEESVLGWKEFEMEVVRDTADNCIIVCSIENLDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQRLRD SIA++R+IGV+ GGSNVQF +NP  G V+VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQRLRDASIAVLRKIGVDTGGSNVQFGINPKTGRVVVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKK-TPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ N+IT   TPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGYTLDELKNEITGGLTPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDW-- 504
            FAFEKFP ++  LTTQMKSVGE MA+GRTFQES QKALR LE G  G+  +    LD   
Sbjct: 362  FAFEKFPAADARLTTQMKSVGEVMAMGRTFQESVQKALRGLETGKVGFDPTG---LDLGN 418

Query: 505  --DWEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLL 562
              D + L+  L+ P P+R+  +  A + GM V+EI+ LSFID WFL Q +E+I  E  + 
Sbjct: 419  EDDLQTLRRELKAPGPERLFFVADAFRAGMSVEEIYALSFIDHWFLDQIEEIIAAEADVA 478

Query: 563  TQSVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFE 622
               +  +      ++KR GFSD ++A  T + E  +R  R +  V P YKRVD+CA EF 
Sbjct: 479  ASGIDALDAARLRKLKRAGFSDARLAQLTGTNEAAIRALRRAHKVRPVYKRVDSCAGEFS 538

Query: 623  ANTPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIM 682
              T Y+YS+Y+ ECE+AP+ + K++ILGGGPNRIGQGIEFDYCC H + +L+  GYETIM
Sbjct: 539  TGTAYLYSTYEDECEAAPSNRDKIMILGGGPNRIGQGIEFDYCCVHAALALREDGYETIM 598

Query: 683  MNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYL 742
            +N NPETVSTDYDTSDRLYFEPLT+EDVL +++LE+P+G+IVQ+GGQTPLKL+       
Sbjct: 599  VNCNPETVSTDYDTSDRLYFEPLTLEDVLEIVELEQPKGVIVQYGGQTPLKLA------- 651

Query: 743  DEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIA 802
               R   A+G   V + GTSPDSID AEDRERF  ++ +L ++QP   IA+++ +AL +A
Sbjct: 652  ---RALEANG---VPVIGTSPDSIDLAEDRERFQQLVDKLGLKQPPNRIARNDQEALLLA 705

Query: 803  KEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVD 862
            +EIGYP+VVRPSYVLGGRAMEIVY +  L  Y+ +AV+V  + PVL+D++L +A+E DVD
Sbjct: 706  REIGYPLVVRPSYVLGGRAMEIVYGEADLARYVRDAVKVSNDSPVLLDRFLDNAVECDVD 765

Query: 863  ALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCG 922
             +AD  GNV+IGG+MEHIE+AGVHSGDS+C +P  ++S+     +    ++LAK LNV G
Sbjct: 766  IIADKEGNVLIGGVMEHIEEAGVHSGDSSCSLPPYSLSAETQAELRRQVVELAKALNVVG 825

Query: 923  LMNCQYAITTSGD----VYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGF 978
            LMN Q+AI TS +    +YLLE NPRASRTVPFVSKA G PLAK AA  M+GKSL + G 
Sbjct: 826  LMNTQFAIQTSDEGADTIYLLEVNPRASRTVPFVSKATGMPLAKIAARCMAGKSLAEQGA 885

Query: 979  TKEVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKL 1038
            TKE++P + SVKEA+ PF KFQG D +LGPEMRSTGEVMG+  SF  AFA+AQ A G K 
Sbjct: 886  TKEIVPDYYSVKEAIFPFAKFQGVDPILGPEMRSTGEVMGVGRSFNAAFARAQEAGGIKA 945

Query: 1039 PLSGTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRP 1098
            P  G  F+S+ D  K  +  +AKA L  G+ +V+T GTA +L+  G+  E + K+ EGRP
Sbjct: 946  PPVGKAFVSVRDPDKKRVLPVAKALLARGYSLVATRGTAAWLQQHGMDCEIINKVVEGRP 1005

Query: 1099 HAGDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALA 1149
            H  D + NG+I  +V T+ G S    D   +RR  L ++V   TT++GA A
Sbjct: 1006 HIVDSIKNGEIVYIVNTTEGRSAIN-DSFSIRREALQHRVTYSTTIAGAKA 1055


>gi|50085901|ref|YP_047411.1| carbamoyl-phosphate synthase, large subunit [Acinetobacter sp. ADP1]
 gi|49531877|emb|CAG69589.1| carbamoyl-phosphate synthase, large subunit [Acinetobacter sp. ADP1]
          Length = 1077

 Score = 1275 bits (3299), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 629/1074 (58%), Positives = 798/1074 (74%), Gaps = 24/1074 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILI+GAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIKSILIIGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPSMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+T + V Q++EKERPDA+LPTMGGQTALN A+AL E+G LEKYGVELIGA  DA
Sbjct: 63   ATYIEPITWQTVAQIIEKERPDAVLPTMGGQTALNCALALDENGVLEKYGVELIGASKDA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I+KAEDR LF QAM+ IG++ P + I   + E + I ++ G FP+IIRP+FT+GG+GGGI
Sbjct: 123  IEKAEDRKLFDQAMRKIGLECPKAAIAENIQEALEIQSKFG-FPVIIRPSFTMGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEF  IC+ G   S T Q+L+++SL+GWKEYE+EV+RD  DN +I+C+IEN DPMG
Sbjct: 182  AYNREEFLEICERGFDLSPTHQLLIDESLIGWKEYEMEVVRDKNDNCIIVCAIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ +R+ SIA++REIGVE GGSNVQF +NP DG ++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQIMRNASIAVLREIGVETGGSNVQFGINPKDGRMVVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT   TPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKIAAKLAVGYTLDELKNDITGGTTPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            F FEKFP +EP+LTTQMKSVGE MA+GR FQES QKALR LE G  G+        +   
Sbjct: 362  FNFEKFPQAEPVLTTQMKSVGEVMAIGRNFQESVQKALRGLEVGVCGFDEKIEVGTEGAR 421

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
            E++++ L VP P+R+  +  A + G  +DE+   + ID+WFL Q +++I  E+ + T   
Sbjct: 422  EKIQHELNVPGPERIWYVADAFRHGFTLDEVFNATKIDRWFLIQIQDIIKTEEQVKTLGF 481

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
             ++  D+    KR+G SD +IA     ++K+ R++R +LGV P YKRVDTCAAEFE++T 
Sbjct: 482  GDLNADNIRAFKRKGLSDLRIANLMGISQKQFRKQRWNLGVYPVYKRVDTCAAEFESSTA 541

Query: 627  YMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSN 686
            YMYS+YD ECE+ P+ + K++++GGGPNRIGQGIEFDYCC H + +++  GYETIM+N N
Sbjct: 542  YMYSTYDEECEANPSNRDKIMVIGGGPNRIGQGIEFDYCCVHAALAMREDGYETIMVNCN 601

Query: 687  PETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHR 746
            PETVSTDYDTSDRLYFEP+T+EDVL ++  E+P+G+IVQ+GGQTPLKL+    + L+E  
Sbjct: 602  PETVSTDYDTSDRLYFEPVTLEDVLEIVRTEKPKGVIVQYGGQTPLKLA----RALEEAG 657

Query: 747  LPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEIG 806
             P         I GTSPD+ID AEDRERF  +I+ L + QP   I KS  + +A A ++G
Sbjct: 658  TP---------IIGTSPDAIDRAEDRERFQQMIQRLQLRQPNNSIVKSAEEGMAEASKVG 708

Query: 807  YPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALAD 866
            YP+VVRPSYVLGGRAMEIVY D+ L  YL +AV+   E PVL+D +L DA E+DVD ++D
Sbjct: 709  YPLVVRPSYVLGGRAMEIVYNDDELKRYLRDAVQASNEAPVLLDHFLDDATEVDVDCVSD 768

Query: 867  SCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNC 926
               +VVIGGIM+HIEQAG+HSGDSAC IP  ++S +  + +   TI +AK L V GLMN 
Sbjct: 769  G-KDVVIGGIMQHIEQAGIHSGDSACSIPPYSLSDTIQNEMRRQTIAMAKELGVVGLMNV 827

Query: 927  QYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPKH 986
            Q+A+    DVY+LE NPRASRTVPFVSK IG  LAK AA  M+G++L   GFTKE+IP  
Sbjct: 828  QFAV-KGDDVYVLEVNPRASRTVPFVSKCIGDSLAKVAARCMAGQTLASQGFTKEIIPTR 886

Query: 987  VSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQK---LPLSGT 1043
             +VKEAV PF KFQG D +LGPEM+STGEVMG+  +F  AF KA + + ++   LP  G 
Sbjct: 887  FAVKEAVFPFAKFQGVDPMLGPEMKSTGEVMGVGKTFGEAFYKAVLGSNERLPGLPTEGE 946

Query: 1044 V---FLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHA 1100
            V   FLS+ +  K H+  IAK     GFK+++T GT   L+  G+A E V K+ EGRPH 
Sbjct: 947  VKHAFLSVRESDKKHIADIAKKLTAFGFKLIATGGTYQVLKAAGLACEHVNKVTEGRPHI 1006

Query: 1101 GDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAI 1154
             D + NG+I ++V T+ G    Q D   +RR  L  KV   TT++GA A  +A 
Sbjct: 1007 VDRLKNGEIHLIVNTTEGKQA-QYDSAMIRRAALQGKVYYTTTINGAEAVCQAF 1059


>gi|293609984|ref|ZP_06692286.1| conserved hypothetical protein [Acinetobacter sp. SH024]
 gi|427423439|ref|ZP_18913592.1| carbamoyl-phosphate synthase, large subunit [Acinetobacter baumannii
            WC-136]
 gi|292828436|gb|EFF86799.1| conserved hypothetical protein [Acinetobacter sp. SH024]
 gi|425699784|gb|EKU69388.1| carbamoyl-phosphate synthase, large subunit [Acinetobacter baumannii
            WC-136]
          Length = 1076

 Score = 1275 bits (3299), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 632/1080 (58%), Positives = 799/1080 (73%), Gaps = 36/1080 (3%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILI+GAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIKSILIIGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPSMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+T + V Q++EKERPDA+LPTMGGQTALN A+AL E G LEKY VELIGA  DA
Sbjct: 63   ATYIEPITWQTVAQIIEKERPDAVLPTMGGQTALNCALALDEHGVLEKYNVELIGATKDA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I+KAEDR LF  AM+ IG++ P + I  T++E + I +  G FP+IIRP+FT+GG+GGGI
Sbjct: 123  IEKAEDRKLFDIAMRKIGLECPKAAIAETMEEALEIQSRFG-FPVIIRPSFTMGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEF  IC+ G   S T Q+L+++SL+GWKEYE+EV+RD  DN +I+C+IEN DPMG
Sbjct: 182  AYNREEFLEICERGFDLSPTHQLLIDESLIGWKEYEMEVVRDKNDNCIIVCAIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGVE GGSNVQF +NP DG ++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQLMRNASVAVLREIGVETGGSNVQFGINPKDGRMVVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKK-TPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT   TPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKIAAKLAVGYTLDELKNDITGGITPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGW------GCSNVK 500
            F FEKFP +EP+LTTQMKSVGE MA+GR FQES QKALR LE G SG+      G +N K
Sbjct: 362  FNFEKFPQAEPVLTTQMKSVGEVMAIGRNFQESVQKALRGLEVGVSGFDEKIEAGATNAK 421

Query: 501  ELDWDWEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQF 560
            E+      +   L+VP P+R+  +  A + G  +DE+ E + ID+WFL Q +++I  E  
Sbjct: 422  EI------ILKELKVPGPERIWYVADAFRHGFSLDEVFEATKIDRWFLIQIQDIIKTEAQ 475

Query: 561  LLTQSVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAE 620
            + T    ++  D+    KR+G SD +IA     ++K+ R++R +LGV P YKRVDTCAAE
Sbjct: 476  VKTLGFGDLNADNIRSFKRKGLSDLRIAHLMGISQKQFRKQRWNLGVYPVYKRVDTCAAE 535

Query: 621  FEANTPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYET 680
            FE+ T YMYS+YD ECE+ P+ + K++++GGGPNRIGQGIEFDYCC H + +++  GYET
Sbjct: 536  FESGTAYMYSTYDEECEANPSNRDKIMVIGGGPNRIGQGIEFDYCCVHAALAMREDGYET 595

Query: 681  IMMNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQ 740
            IM+N NPETVSTDYDTSDRLYFEP+T+EDVL ++  E+P+G+IVQ+GGQTPLKL+    +
Sbjct: 596  IMVNCNPETVSTDYDTSDRLYFEPVTLEDVLEIVRTEKPKGVIVQYGGQTPLKLA----R 651

Query: 741  YLDEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALA 800
             L+E   P         I GTSPD+ID AEDRERF  +I+ L + QP   I KS  + ++
Sbjct: 652  ALEEAGTP---------IIGTSPDAIDRAEDRERFQQMIQRLQLRQPNNSIVKSAEEGIS 702

Query: 801  IAKEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEID 860
             A ++GYP+VVRPSYVLGGRAMEIVY +E L  YL  AV+   E PVL+D++L DA E+D
Sbjct: 703  EAAKVGYPLVVRPSYVLGGRAMEIVYNEEELKRYLREAVQASNEAPVLLDRFLDDATEVD 762

Query: 861  VDALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNV 920
            VD ++D   +VVIGGIM+HIEQAG+HSGDSAC IP  ++S    D +   TI +AK L V
Sbjct: 763  VDCVSDG-KDVVIGGIMQHIEQAGIHSGDSACSIPPYSLSKEIQDEMRRQTIAMAKELGV 821

Query: 921  CGLMNCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTK 980
             GLMN Q+A+    D+Y+LE NPRASRTVPFVSK IG  LAK AA  M+G+SL   GFTK
Sbjct: 822  VGLMNVQFAV-KGDDIYVLEVNPRASRTVPFVSKCIGDSLAKVAARCMAGQSLESQGFTK 880

Query: 981  EVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQK--- 1037
            E+IP H +VKEAV PF KFQG D +LGPEM+STGEVMG+  +F  AF KA + + ++   
Sbjct: 881  EIIPTHFAVKEAVFPFAKFQGVDPMLGPEMKSTGEVMGVGKTFGEAFYKAVLGSNERLPG 940

Query: 1038 LPLSGTV---FLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMH 1094
            LP  G V   FLS+ +  K ++  IAK  ++ GFK+V+T GT   L+  G+  E V K+ 
Sbjct: 941  LPTEGEVKHAFLSVRESDKKYIADIAKKLVEYGFKLVATGGTYQVLKEAGLECESVNKVT 1000

Query: 1095 EGRPHAGDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAI 1154
            EGRPH  D + NG+I ++V T+ G    Q D   +RR  L  KV   TT++GA A  +A 
Sbjct: 1001 EGRPHIVDRLKNGEIHLIVNTTEGKQA-QYDSAMIRRAALQGKVYYTTTINGAEAVCQAF 1059


>gi|427403730|ref|ZP_18894612.1| carbamoyl-phosphate synthase large chain [Massilia timonae CCUG
            45783]
 gi|425717713|gb|EKU80669.1| carbamoyl-phosphate synthase large chain [Massilia timonae CCUG
            45783]
          Length = 1076

 Score = 1275 bits (3299), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 640/1075 (59%), Positives = 804/1075 (74%), Gaps = 28/1075 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KR+D++ ILI+GAGPIVIGQA EFDYSG QACKAL+EEGY+VIL+NSNPATIMTDP  AD
Sbjct: 3    KRSDIKSILIIGAGPIVIGQAVEFDYSGAQACKALREEGYKVILVNSNPATIMTDPETAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+T ++VE+++EKERPDA+LPTMGGQTALN A+ L   G L+KY VELIGA  +A
Sbjct: 63   VTYIEPITWKVVERIIEKERPDAILPTMGGQTALNCALDLHRHGVLDKYKVELIGATPEA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  FK AM  IG+ +  SG+ ++++E  S+  E+G FP IIRP+FT+GG+GGGI
Sbjct: 123  IDKAEDRSKFKDAMTKIGLGSARSGVAHSMEEAWSVQRELG-FPTIIRPSFTMGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEFE ICK GL AS T+++L+E+SLLGWKEYE+EV+RD  DN +IICSIEN+DPMG
Sbjct: 182  AYNEEEFEQICKRGLEASPTNELLIEESLLGWKEYEMEVVRDKNDNCIIICSIENLDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ +R+ SI ++REIGV+ GGSNVQF++NP DG ++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQIMRNASIDVLREIGVDTGGSNVQFSINPKDGRMIVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITK-KTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VG++LD++ N+IT   TPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGFTLDELRNEITGGATPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            F FEKFP ++  LTTQMKSVGE MA+GRTFQESFQKALR LE G  G     + E   D 
Sbjct: 362  FTFEKFPTADKHLTTQMKSVGEVMAMGRTFQESFQKALRGLEVGVDG-----LNEKTRDR 416

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
            E+++  L  P P+R+  +  A  +G  ++E+H L+ ID WFL Q KE++D+E +L TQ++
Sbjct: 417  EKIEEELGEPGPERIWYVGDAFAQGFTLEEVHNLTKIDPWFLVQIKEIVDIELWLETQTL 476

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
             ++ K+  Y++K++GFSD+++AF  K     VR +R  L + P YKRVDTCAAEF  NT 
Sbjct: 477  ESLDKNVLYKLKQKGFSDRRMAFLLKVEPSAVRARRHELNIRPVYKRVDTCAAEFATNTA 536

Query: 627  YMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSN 686
            YMYS+YD ECES PT KKK+++LGGGPNRIGQGIEFDYCC H + +++  GYETIM+N N
Sbjct: 537  YMYSTYDEECESNPTDKKKIMVLGGGPNRIGQGIEFDYCCVHAALAMREDGYETIMVNCN 596

Query: 687  PETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHR 746
            PETVSTDYDTSDRLYFE LT+EDVL +++LE+P G+IVQ+GGQTPLKL+L +        
Sbjct: 597  PETVSTDYDTSDRLYFESLTLEDVLEIVELEKPVGVIVQYGGQTPLKLALDLE------- 649

Query: 747  LPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEIG 806
               A+G   V I GTSPD IDAAEDRERF  ++++L + QP    A++EADALA+A+EIG
Sbjct: 650  ---ANG---VPIIGTSPDMIDAAEDRERFQQLLQKLDLRQPPNRTARTEADALALAEEIG 703

Query: 807  YPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALAD 866
            YP+VVRPSYVLGGRAMEIV+    L  Y+  AV+V  + PVL+D++L+DAIE+DVD ++D
Sbjct: 704  YPLVVRPSYVLGGRAMEIVHEQRDLERYMREAVKVSHDSPVLLDRFLNDAIEVDVDCISD 763

Query: 867  SCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNC 926
                  IGG+MEHIEQAGVHSGDSAC +P  ++S + +D +   T  +AK LNV GLMN 
Sbjct: 764  GEAT-FIGGVMEHIEQAGVHSGDSACSLPPYSLSQATIDELKRQTSLMAKALNVVGLMNV 822

Query: 927  QYAITTS-------GDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFT 979
            Q+AI  S         VY+LE NPRASRTVPFVSKA G  LAK AA  M G++L   G T
Sbjct: 823  QFAIQQSEQDGQTVDTVYVLEVNPRASRTVPFVSKATGLQLAKIAARCMVGQTLEQQGIT 882

Query: 980  KEVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLP 1039
            +EV+P   SVKE V PF KF G D +LGPEM+STGEVMG+  +F  AF K+Q+AAG KLP
Sbjct: 883  QEVVPPFYSVKEVVFPFVKFPGVDTILGPEMKSTGEVMGVGTTFGEAFVKSQLAAGIKLP 942

Query: 1040 LSGTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPH 1099
             SGTVFLS+    KP    +A+  + +GF +V+T GTA  +   GI V  V K+ EGRPH
Sbjct: 943  KSGTVFLSVKSSDKPRAVGVARELVKLGFDLVATKGTAAVISAAGIPVRSVNKVLEGRPH 1002

Query: 1100 AGDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAI 1154
              DM+ N +I M+V T         D   +R   LA  V   TT++GA A  E +
Sbjct: 1003 VVDMIKNHEIVMVVNTVEEKRSAITDSRTIRTSALAAHVVTYTTIAGAEAAIEGM 1057


>gi|253999584|ref|YP_003051647.1| carbamoyl-phosphate synthase large subunit [Methylovorus
            glucosetrophus SIP3-4]
 gi|253986263|gb|ACT51120.1| carbamoyl-phosphate synthase, large subunit [Methylovorus
            glucosetrophus SIP3-4]
          Length = 1069

 Score = 1275 bits (3298), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 631/1066 (59%), Positives = 810/1066 (75%), Gaps = 25/1066 (2%)

Query: 86   LGKRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGL 145
            + KRTD++ ILI+GAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +
Sbjct: 1    MAKRTDIKSILIIGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEM 60

Query: 146  ADRTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKL 205
            AD TYI P+T ++VE+++  ERPDALLPTMGGQTALN A+ LA+ G LEKY VELIGA  
Sbjct: 61   ADATYIEPVTWKMVEKIIAIERPDALLPTMGGQTALNCALDLAKHGVLEKYNVELIGASK 120

Query: 206  DAIKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGG 265
            +AI KAEDR+ FK AM  IG+ +  S + ++L+E + +   IG +P IIRP+FT+GG+GG
Sbjct: 121  EAIDKAEDREKFKTAMTKIGLGSARSSVAHSLEEALQVQASIG-YPAIIRPSFTMGGSGG 179

Query: 266  GIAYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDP 325
            GIAYNKEEF AIC+ GL AS TS++L+E+SLLGWKEYE+EV+RD  DN +IICSIEN+DP
Sbjct: 180  GIAYNKEEFLAICERGLEASPTSELLIEESLLGWKEYEMEVVRDSKDNCIIICSIENLDP 239

Query: 326  MGVHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIE 385
            MGVHTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGV+ GGSNVQFA+NP DG ++VIE
Sbjct: 240  MGVHTGDSITVAPAQTLTDKEYQIMRNASLAVLREIGVDTGGSNVQFAINPDDGRMIVIE 299

Query: 386  MNPRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITK-KTPASFEPSIDYVVTKI 444
            MNPRVSRSSALASKATGFPIAK+AAKL+VG++LD++ N+IT   TPASFEPSIDYVVTKI
Sbjct: 300  MNPRVSRSSALASKATGFPIAKVAAKLAVGFTLDELRNEITGGATPASFEPSIDYVVTKI 359

Query: 445  PRFAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDW 504
            PRFAFEKFP ++  LTTQMKSVGE MA+GRTFQESFQKALR LE G  G     + E   
Sbjct: 360  PRFAFEKFPQADSRLTTQMKSVGEVMAIGRTFQESFQKALRGLEVGVDG-----LDEKTT 414

Query: 505  DWEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQ 564
            D +Q+   L  P P+R+  +  A + GM V+++H+LS IDKWFL Q  +LI  E+ L  +
Sbjct: 415  DTDQINKELGEPGPERIWYVGDAFRAGMTVEQVHQLSKIDKWFLVQIADLIAREEALKGK 474

Query: 565  SVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEAN 624
             ++++ K+  +++KRRGFSD+++A    + +  VR  R +L V P YKRVDTCAAEF  +
Sbjct: 475  GLADLDKNLLFQLKRRGFSDRRLAKLLGTDQHAVRAYRQALNVRPVYKRVDTCAAEFATD 534

Query: 625  TPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMN 684
            T YMYS+Y+ ECE+ PT  KK+++LGGGPNRIGQGIEFDYCC H +F+++  GYETIM+N
Sbjct: 535  TAYMYSTYEDECEAQPTSNKKIMVLGGGPNRIGQGIEFDYCCVHAAFAMREDGYETIMVN 594

Query: 685  SNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDE 744
             NPETVSTDYDTSDRLYFEPLT+EDVL ++ LE+P G+IVQ+GGQTPLKL+    + L++
Sbjct: 595  CNPETVSTDYDTSDRLYFEPLTLEDVLEIVALEKPVGVIVQYGGQTPLKLA----RDLEK 650

Query: 745  HRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKE 804
              +P         I GTSPD+ID AEDRERF  +++EL ++QP    A++  +A+ +A+E
Sbjct: 651  AGVP---------IIGTSPDAIDRAEDRERFQQMLQELGLKQPPNRTARTPEEAIRLAQE 701

Query: 805  IGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDAL 864
            IGYP+VVRPSYVLGGRAMEIV+    L  Y+  AV+V  E PVL+D++L+DA+E+DVDAL
Sbjct: 702  IGYPLVVRPSYVLGGRAMEIVHEQAQLERYMREAVKVSNESPVLLDRFLNDALEVDVDAL 761

Query: 865  ADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLM 924
            +D   +V+IGGIMEHIEQAGVHSGDSAC +P  +++ +  D +   T+++AK L V GLM
Sbjct: 762  SDG-EDVIIGGIMEHIEQAGVHSGDSACSLPPYSLTQAMQDELRVQTVQMAKALGVVGLM 820

Query: 925  NCQYAITTSGD-VYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVI 983
            N Q+AI   GD VY+LE NPRASRTVPFVSKA G  LAK AA  M+G +L   G TKE++
Sbjct: 821  NVQFAI--QGDVVYVLEVNPRASRTVPFVSKACGLQLAKVAARCMTGVTLKQQGVTKEIV 878

Query: 984  PKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGT 1043
            P + SVKEAV PF KF G D +LGPEM+STGEVMG+  +F  AF K+Q+ +G KLP +G 
Sbjct: 879  PPYYSVKEAVFPFIKFPGVDTILGPEMKSTGEVMGVGKTFAEAFVKSQLGSGTKLPKAGK 938

Query: 1044 VFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDM 1103
             F+S+    +  +  IA++  ++GF++V+T G+A  L   G+ V  V K+ EGRPH  DM
Sbjct: 939  AFISVRREDREKVIEIARSLANLGFQLVATKGSAAALADAGLKVTPVNKVAEGRPHIVDM 998

Query: 1104 VANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALA 1149
            + NG+I  +V  +  D     D  ++RR  L  KV   TT++GA A
Sbjct: 999  IKNGEISFIVNVTE-DKKAVADSYEIRRSALQQKVTYYTTLAGAKA 1043



 Score =  255 bits (651), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 159/429 (37%), Positives = 245/429 (57%), Gaps = 26/429 (6%)

Query: 61  VRASSAKIDS-SAELSNGAA----SSKDQKLGKRTDLRKILILGAGPIVIGQACEFDYSG 115
           VR    ++D+ +AE +   A    + +D+   + T  +KI++LG GP  IGQ  EFDY  
Sbjct: 517 VRPVYKRVDTCAAEFATDTAYMYSTYEDECEAQPTSNKKIMVLGGGPNRIGQGIEFDYCC 576

Query: 116 TQACKALKEEGYEVILINSNPATIMTDPGLADRTYITPMTPELVEQVLEKERPDALLPTM 175
             A  A++E+GYE I++N NP T+ TD   +DR Y  P+T E V +++  E+P  ++   
Sbjct: 577 VHAAFAMREDGYETIMVNCNPETVSTDYDTSDRLYFEPLTLEDVLEIVALEKPVGVIVQY 636

Query: 176 GGQTALNLAVALAESGALEKYGVELIGAKLDAIKKAEDRDLFKQAMKTIGVKTPPSGIGN 235
           GGQT L LA        LEK GV +IG   DAI +AEDR+ F+Q ++ +G+K PP+    
Sbjct: 637 GGQTPLKLA------RDLEKAGVPIIGTSPDAIDRAEDRERFQQMLQELGLKQPPNRTAR 690

Query: 236 TLDECISIANEIGEFPLIIRPAFTLGGTGGGIAYNKEEFEAICKAGLAASLTSQVLVEKS 295
           T +E I +A EIG +PL++RP++ LGG    I + + + E   +  +  S  S VL+++ 
Sbjct: 691 TPEEAIRLAQEIG-YPLVVRPSYVLGGRAMEIVHEQAQLERYMREAVKVSNESPVLLDRF 749

Query: 296 LLGWKEYELEVMRDLADNVVIICSIENVDPMGVHTGDSITVAPAQTLTDKEYQRLRDYSI 355
           L    E +++ + D  ++V+I   +E+++  GVH+GDS    P  +LT      LR  ++
Sbjct: 750 LNDALEVDVDALSD-GEDVIIGGIMEHIEQAGVHSGDSACSLPPYSLTQAMQDELRVQTV 808

Query: 356 AIIREIGVECGGSNVQFAVNPVDGEVM-VIEMNPRVSRSSALASKATGFPIAKMAAKLSV 414
            + + +GV  G  NVQFA+    G+V+ V+E+NPR SR+    SKA G  +AK+AA+   
Sbjct: 809 QMAKALGV-VGLMNVQFAIQ---GDVVYVLEVNPRASRTVPFVSKACGLQLAKVAARCMT 864

Query: 415 GYSLDQIPNDITKKTPASFEPSIDYVVTKIPRFAFEKFPGSEPLLTTQMKSVGEAMALGR 474
           G +L Q    +TK      E    Y   K   F F KFPG + +L  +MKS GE M +G+
Sbjct: 865 GVTLKQ--QGVTK------EIVPPYYSVKEAVFPFIKFPGVDTILGPEMKSTGEVMGVGK 916

Query: 475 TFQESFQKA 483
           TF E+F K+
Sbjct: 917 TFAEAFVKS 925


>gi|78355380|ref|YP_386829.1| carbamoyl-phosphate synthase large subunit [Desulfovibrio alaskensis
            G20]
 gi|78217785|gb|ABB37134.1| carbamoyl-phosphate synthase, large subunit [Desulfovibrio alaskensis
            G20]
          Length = 1087

 Score = 1275 bits (3298), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 643/1101 (58%), Positives = 807/1101 (73%), Gaps = 30/1101 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTDL++I+++G+GPIVIGQACEFDYSGTQA KALKEEGYEV+L+NSNPATIMTDPGLAD
Sbjct: 3    KRTDLKRIMVIGSGPIVIGQACEFDYSGTQAVKALKEEGYEVVLVNSNPATIMTDPGLAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
            RTYI P+ PE V  ++ KERP ALLPT+GGQT LN A+A+AE+G LE+ GVELIGA  D 
Sbjct: 63   RTYIEPIEPETVAAIIRKERPCALLPTLGGQTGLNTALAVAETGVLEECGVELIGATRDV 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAE RDLF+QAM  IG+K P SGI  T+D+   +  E+  FPLI+RPAFTLGG+GGGI
Sbjct: 123  INKAESRDLFRQAMANIGLKVPASGIARTMDDVRRLGAEM-PFPLIVRPAFTLGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN E+ E I   GLAAS+ S++LVE+S+LGWKEYE+EVMRD  DN VI+CSIEN+DPMG
Sbjct: 182  AYNMEDLEEIASQGLAASMQSEILVEQSVLGWKEYEMEVMRDRNDNCVIVCSIENIDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTD EYQ +RD SIAI+REIGVE GGSNVQF +NP +G+++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDVEYQMMRDASIAIMREIGVETGGSNVQFGINPENGDMVVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRF 447
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD+IPNDIT++T ASFEPSIDY V K+PRF
Sbjct: 302  PRVSRSSALASKATGFPIAKIAAKLAVGYTLDEIPNDITRETMASFEPSIDYCVIKLPRF 361

Query: 448  AFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDWE 507
             FEKFPGS   L T MKSVGEAMA+GRTF+E+ QK LRSLE G +G+G +  +EL    E
Sbjct: 362  TFEKFPGSRDELNTAMKSVGEAMAIGRTFKEALQKGLRSLEVGAAGFGGNYREELPAR-E 420

Query: 508  QLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQ----FLLT 563
             +   LR PN  R+  +  AM  G  ++E++E++ ID WFL QFK+++D+E     F L 
Sbjct: 421  DIMPRLRTPNSRRIFWLRLAMLAGFTLEELYEITAIDPWFLRQFKDVLDMEAALKGFALA 480

Query: 564  QSVSNMTKDDFYEVKR---RGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAE 620
             S+     D    +KR    GFSD+Q+A   K  E  VR+ R S+G+ P+Y  VDTCAAE
Sbjct: 481  NSMVAENPDLVSLMKRAKEYGFSDRQLAEMWKLPESAVRDLRKSMGIRPTYYLVDTCAAE 540

Query: 621  FEANTPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYET 680
            FEA TPY YS+Y+   E     +KKV+I GGGPNRIGQGIEFDYCCCH SF+L+    ++
Sbjct: 541  FEAYTPYYYSTYETGRELVAEDRKKVIIFGGGPNRIGQGIEFDYCCCHASFALRDMNVQS 600

Query: 681  IMMNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQ 740
            IM+NSNPETVSTDYDTSDRLYFEPLT EDV+N+++ E+P+G+IVQFGGQTPL L++P+ +
Sbjct: 601  IMVNSNPETVSTDYDTSDRLYFEPLTFEDVMNIVEAEKPDGVIVQFGGQTPLNLAVPLMR 660

Query: 741  YLDEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALA 800
                           V I GT PDSID AEDRERF A+I++L + QP      S  +AL 
Sbjct: 661  -------------AGVPILGTHPDSIDRAEDRERFQALIQKLDLLQPANDTVMSLEEALK 707

Query: 801  IAKEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEID 860
             ++ IGYPVVVRPSYVLGGRAME+VY  E L TY  N+V   PE P+LIDK+L +A E+D
Sbjct: 708  ASETIGYPVVVRPSYVLGGRAMEVVYDAEQLRTYFANSVGKAPEHPILIDKFLENATEVD 767

Query: 861  VDALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNV 920
            VDAL+D C +  + GIMEHIE+AG+HSGDSAC+IP  T+ +  ++ I   T+ LA  L V
Sbjct: 768  VDALSDGC-DTYVAGIMEHIEEAGIHSGDSACVIPPHTLPADIVEEIRRQTVALATELKV 826

Query: 921  CGLMNCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTK 980
             GLMN Q+AI   G V++LE NPRASRT PFVSKA G PL + A  VM G  L +L    
Sbjct: 827  VGLMNIQFAI-KDGRVFILEVNPRASRTAPFVSKATGVPLPRLATQVMMGTPLRELDPWS 885

Query: 981  EVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPL 1040
                 + SVKE+V PF++F G D+LLGPEMRSTGEVMG+  +F  AF K QIA GQKLP 
Sbjct: 886  MRRRGYFSVKESVFPFKRFPGVDILLGPEMRSTGEVMGMGRTFEEAFMKGQIAGGQKLPQ 945

Query: 1041 SGTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHA 1100
             G VF+S+ND  KP++  +A+ F  +GF++++T GT   LE   ++   V K++EGRP+ 
Sbjct: 946  EGKVFISVNDKDKPYVVEVARVFAGLGFEVLATKGTCKLLEENNVSCTPVYKVYEGRPNI 1005

Query: 1101 GDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSN 1160
             D + NG++ ++V T+SG    Q D   +R+  L Y VP  TTVSGA A A AI   +  
Sbjct: 1006 VDFIKNGEVSLVVNTASGKRTVQ-DSKDIRQATLLYGVPYSTTVSGAHAIARAIAEQRRC 1064

Query: 1161 TVTMTALQDFFDVETASGSSE 1181
             +T+ +LQ+++     +GS+E
Sbjct: 1065 GLTVKSLQEYY-----AGSTE 1080


>gi|375135747|ref|YP_004996397.1| carbamoyl-phosphate synthase large subunit [Acinetobacter
            calcoaceticus PHEA-2]
 gi|325123192|gb|ADY82715.1| carbamoyl-phosphate synthase, large subunit [Acinetobacter
            calcoaceticus PHEA-2]
          Length = 1076

 Score = 1274 bits (3297), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 631/1080 (58%), Positives = 799/1080 (73%), Gaps = 36/1080 (3%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILI+GAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIKSILIIGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPSMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+T + V Q++EKERPDA+LPTMGGQTALN A+AL E G LEKY VELIGA  DA
Sbjct: 63   ATYIEPITWQTVAQIIEKERPDAVLPTMGGQTALNCALALDEHGVLEKYNVELIGATKDA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I+KAEDR LF  AM+ IG++ P + I  T++E + I +  G FP+IIRP+FT+GG+GGGI
Sbjct: 123  IEKAEDRKLFDIAMRKIGLECPKAAIAETMEEALEIQSRFG-FPVIIRPSFTMGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEF  IC+ G   S T Q+L+++SL+GWKEYE+EV+RD  DN +I+C+IEN DPMG
Sbjct: 182  AYNREEFLEICERGFDLSPTHQLLIDESLIGWKEYEMEVVRDKNDNCIIVCAIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGVE GGSNVQF +NP DG ++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQLMRNASVAVLREIGVETGGSNVQFGINPKDGRMVVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKK-TPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT   TPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKIAAKLAVGYTLDELKNDITGGVTPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGW------GCSNVK 500
            F FEKFP +EP+LTTQMKSVGE MA+GR FQES QKALR LE G SG+      G +N K
Sbjct: 362  FNFEKFPQAEPVLTTQMKSVGEVMAIGRNFQESVQKALRGLEVGVSGFDEKIEAGATNAK 421

Query: 501  ELDWDWEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQF 560
            E+      +   L+VP P+R+  +  A + G  +DE+ E + ID+WFL Q ++++  E  
Sbjct: 422  EI------ILKELKVPGPERIWYVADAFRHGFSLDEVFEATKIDRWFLIQIQDIVKTEAQ 475

Query: 561  LLTQSVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAE 620
            + T    ++  D+    KR+G SD +IA     ++K+ R++R +LGV P YKRVDTCAAE
Sbjct: 476  VKTLGFGDLNADNIRSFKRKGLSDLRIAHLMGISQKQFRKQRWNLGVYPVYKRVDTCAAE 535

Query: 621  FEANTPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYET 680
            FE+ T YMYS+YD ECE+ P+ + K++++GGGPNRIGQGIEFDYCC H + +++  GYET
Sbjct: 536  FESGTAYMYSTYDEECEANPSNRDKIMVIGGGPNRIGQGIEFDYCCVHAALAMREDGYET 595

Query: 681  IMMNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQ 740
            IM+N NPETVSTDYDTSDRLYFEP+T+EDVL ++  E+P+G+IVQ+GGQTPLKL+    +
Sbjct: 596  IMVNCNPETVSTDYDTSDRLYFEPVTLEDVLEIVRTEKPKGVIVQYGGQTPLKLA----R 651

Query: 741  YLDEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALA 800
             L+E   P         I GTSPD+ID AEDRERF  +I+ L + QP   I KS  + ++
Sbjct: 652  ALEEAGTP---------IIGTSPDAIDRAEDRERFQQMIQRLQLRQPNNSIVKSAEEGIS 702

Query: 801  IAKEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEID 860
             A ++GYP+VVRPSYVLGGRAMEIVY +E L  YL  AV+   E PVL+D++L DA E+D
Sbjct: 703  EAAKVGYPLVVRPSYVLGGRAMEIVYNEEELKRYLREAVQASNEAPVLLDRFLDDATEVD 762

Query: 861  VDALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNV 920
            VD ++D   +VVIGGIM+HIEQAG+HSGDSAC IP  ++S    D +   TI +AK L V
Sbjct: 763  VDCVSDG-KDVVIGGIMQHIEQAGIHSGDSACSIPPYSLSKEIQDEMRRQTIAMAKELGV 821

Query: 921  CGLMNCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTK 980
             GLMN Q+A+    D+Y+LE NPRASRTVPFVSK IG  LAK AA  M+G+SL   GFTK
Sbjct: 822  VGLMNVQFAV-KGDDIYVLEVNPRASRTVPFVSKCIGDSLAKVAARCMAGQSLESQGFTK 880

Query: 981  EVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQK--- 1037
            E+IP H +VKEAV PF KFQG D +LGPEM+STGEVMG+  +F  AF KA + + ++   
Sbjct: 881  EIIPTHFAVKEAVFPFAKFQGVDPMLGPEMKSTGEVMGVGKTFGEAFYKAVLGSNERLPG 940

Query: 1038 LPLSGTV---FLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMH 1094
            LP  G V   FLS+ +  K ++  IAK  ++ GFK+V+T GT   L+  G+  E V K+ 
Sbjct: 941  LPTEGEVKHAFLSVRESDKKYIADIAKKLVEYGFKLVATGGTYQVLKEAGLECESVNKVT 1000

Query: 1095 EGRPHAGDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAI 1154
            EGRPH  D + NG+I ++V T+ G    Q D   +RR  L  KV   TT++GA A  +A 
Sbjct: 1001 EGRPHIVDRLKNGEIHLIVNTTEGKQA-QYDSAMIRRAALQGKVYYTTTINGAEAVCQAF 1059


>gi|313201619|ref|YP_004040277.1| carbamoyl-phosphate synthase large subunit [Methylovorus sp. MP688]
 gi|312440935|gb|ADQ85041.1| carbamoyl-phosphate synthase, large subunit [Methylovorus sp. MP688]
          Length = 1069

 Score = 1274 bits (3297), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 631/1066 (59%), Positives = 810/1066 (75%), Gaps = 25/1066 (2%)

Query: 86   LGKRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGL 145
            + KRTD++ ILI+GAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +
Sbjct: 1    MAKRTDIKSILIIGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEM 60

Query: 146  ADRTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKL 205
            AD TYI P+T ++VE+++  ERPDALLPTMGGQTALN A+ LA+ G LEKY VELIGA  
Sbjct: 61   ADATYIEPVTWKMVEKIIAIERPDALLPTMGGQTALNCALDLAKHGVLEKYNVELIGASK 120

Query: 206  DAIKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGG 265
            +AI KAEDR+ FK AM  IG+ +  S + ++L+E + +   IG +P IIRP+FT+GG+GG
Sbjct: 121  EAIDKAEDREKFKTAMTKIGLGSARSSVAHSLEEALQVQASIG-YPAIIRPSFTMGGSGG 179

Query: 266  GIAYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDP 325
            GIAYNKEEF AIC+ GL AS TS++L+E+SLLGWKEYE+EV+RD  DN +IICSIEN+DP
Sbjct: 180  GIAYNKEEFLAICERGLEASPTSELLIEESLLGWKEYEMEVVRDSKDNCIIICSIENLDP 239

Query: 326  MGVHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIE 385
            MGVHTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGV+ GGSNVQFA+NP DG ++VIE
Sbjct: 240  MGVHTGDSITVAPAQTLTDKEYQIMRNASLAVLREIGVDTGGSNVQFAINPDDGRMIVIE 299

Query: 386  MNPRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITK-KTPASFEPSIDYVVTKI 444
            MNPRVSRSSALASKATGFPIAK+AAKL+VG++LD++ N+IT   TPASFEPSIDYVVTKI
Sbjct: 300  MNPRVSRSSALASKATGFPIAKVAAKLAVGFTLDELRNEITGGATPASFEPSIDYVVTKI 359

Query: 445  PRFAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDW 504
            PRFAFEKFP ++  LTTQMKSVGE MA+GRTFQESFQKALR LE G  G     + E   
Sbjct: 360  PRFAFEKFPQADSRLTTQMKSVGEVMAIGRTFQESFQKALRGLEVGVDG-----LDEKTT 414

Query: 505  DWEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQ 564
            D +Q+   L  P P+R+  +  A + GM V+++H+LS IDKWFL Q  +LI  E+ L  +
Sbjct: 415  DTDQINKELGEPGPERIWYVGDAFRAGMTVEQVHQLSKIDKWFLVQIADLIAREEALKGK 474

Query: 565  SVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEAN 624
             ++++ K+  +++KRRGFSD+++A    + +  VR  R +L V P YKRVDTCAAEF  +
Sbjct: 475  GLADLDKNLLFQLKRRGFSDRRLAKLLGTDQHAVRAYRQALNVRPVYKRVDTCAAEFATD 534

Query: 625  TPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMN 684
            T YMYS+Y+ ECE+ PT  KK+++LGGGPNRIGQGIEFDYCC H +F+++  GYETIM+N
Sbjct: 535  TAYMYSTYEDECEAQPTTNKKIMVLGGGPNRIGQGIEFDYCCVHAAFAMREDGYETIMVN 594

Query: 685  SNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDE 744
             NPETVSTDYDTSDRLYFEPLT+EDVL ++ LE+P G+IVQ+GGQTPLKL+    + L++
Sbjct: 595  CNPETVSTDYDTSDRLYFEPLTLEDVLEIVALEKPVGVIVQYGGQTPLKLA----RDLEK 650

Query: 745  HRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKE 804
              +P         I GTSPD+ID AEDRERF  +++EL ++QP    A++  +A+ +A+E
Sbjct: 651  AGVP---------IIGTSPDAIDRAEDRERFQQMLQELGLKQPPNRTARTPEEAIRLAQE 701

Query: 805  IGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDAL 864
            IGYP+VVRPSYVLGGRAMEIV+    L  Y+  AV+V  E PVL+D++L+DA+E+DVDAL
Sbjct: 702  IGYPLVVRPSYVLGGRAMEIVHEQAQLERYMREAVKVSNESPVLLDRFLNDALEVDVDAL 761

Query: 865  ADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLM 924
            +D   +V+IGGIMEHIEQAGVHSGDSAC +P  +++ +  D +   T+++AK L V GLM
Sbjct: 762  SDG-EDVIIGGIMEHIEQAGVHSGDSACSLPPYSLTQAMQDELRVQTVQMAKALGVVGLM 820

Query: 925  NCQYAITTSGD-VYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVI 983
            N Q+AI   GD VY+LE NPRASRTVPFVSKA G  LAK AA  M+G +L   G TKE++
Sbjct: 821  NVQFAI--QGDVVYVLEVNPRASRTVPFVSKACGLQLAKVAARCMTGVTLKQQGVTKEIV 878

Query: 984  PKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGT 1043
            P + SVKEAV PF KF G D +LGPEM+STGEVMG+  +F  AF K+Q+ +G KLP +G 
Sbjct: 879  PPYYSVKEAVFPFIKFPGVDTILGPEMKSTGEVMGVGKTFAEAFVKSQLGSGTKLPKAGK 938

Query: 1044 VFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDM 1103
             F+S+    +  +  IA++  ++GF++V+T G+A  L   G+ V  V K+ EGRPH  DM
Sbjct: 939  AFISVRREDREKVIEIARSLANLGFQLVATKGSAAALADAGLKVTPVNKVAEGRPHIVDM 998

Query: 1104 VANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALA 1149
            + NG+I  +V  +  D     D  ++RR  L  KV   TT++GA A
Sbjct: 999  IKNGEISFIVNVTE-DKKAVADSYEIRRSALQQKVTYYTTLAGAKA 1043



 Score =  254 bits (650), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 159/429 (37%), Positives = 245/429 (57%), Gaps = 26/429 (6%)

Query: 61  VRASSAKIDS-SAELSNGAA----SSKDQKLGKRTDLRKILILGAGPIVIGQACEFDYSG 115
           VR    ++D+ +AE +   A    + +D+   + T  +KI++LG GP  IGQ  EFDY  
Sbjct: 517 VRPVYKRVDTCAAEFATDTAYMYSTYEDECEAQPTTNKKIMVLGGGPNRIGQGIEFDYCC 576

Query: 116 TQACKALKEEGYEVILINSNPATIMTDPGLADRTYITPMTPELVEQVLEKERPDALLPTM 175
             A  A++E+GYE I++N NP T+ TD   +DR Y  P+T E V +++  E+P  ++   
Sbjct: 577 VHAAFAMREDGYETIMVNCNPETVSTDYDTSDRLYFEPLTLEDVLEIVALEKPVGVIVQY 636

Query: 176 GGQTALNLAVALAESGALEKYGVELIGAKLDAIKKAEDRDLFKQAMKTIGVKTPPSGIGN 235
           GGQT L LA        LEK GV +IG   DAI +AEDR+ F+Q ++ +G+K PP+    
Sbjct: 637 GGQTPLKLA------RDLEKAGVPIIGTSPDAIDRAEDRERFQQMLQELGLKQPPNRTAR 690

Query: 236 TLDECISIANEIGEFPLIIRPAFTLGGTGGGIAYNKEEFEAICKAGLAASLTSQVLVEKS 295
           T +E I +A EIG +PL++RP++ LGG    I + + + E   +  +  S  S VL+++ 
Sbjct: 691 TPEEAIRLAQEIG-YPLVVRPSYVLGGRAMEIVHEQAQLERYMREAVKVSNESPVLLDRF 749

Query: 296 LLGWKEYELEVMRDLADNVVIICSIENVDPMGVHTGDSITVAPAQTLTDKEYQRLRDYSI 355
           L    E +++ + D  ++V+I   +E+++  GVH+GDS    P  +LT      LR  ++
Sbjct: 750 LNDALEVDVDALSD-GEDVIIGGIMEHIEQAGVHSGDSACSLPPYSLTQAMQDELRVQTV 808

Query: 356 AIIREIGVECGGSNVQFAVNPVDGEVM-VIEMNPRVSRSSALASKATGFPIAKMAAKLSV 414
            + + +GV  G  NVQFA+    G+V+ V+E+NPR SR+    SKA G  +AK+AA+   
Sbjct: 809 QMAKALGV-VGLMNVQFAIQ---GDVVYVLEVNPRASRTVPFVSKACGLQLAKVAARCMT 864

Query: 415 GYSLDQIPNDITKKTPASFEPSIDYVVTKIPRFAFEKFPGSEPLLTTQMKSVGEAMALGR 474
           G +L Q    +TK      E    Y   K   F F KFPG + +L  +MKS GE M +G+
Sbjct: 865 GVTLKQ--QGVTK------EIVPPYYSVKEAVFPFIKFPGVDTILGPEMKSTGEVMGVGK 916

Query: 475 TFQESFQKA 483
           TF E+F K+
Sbjct: 917 TFAEAFVKS 925


>gi|158520138|ref|YP_001528008.1| carbamoyl-phosphate synthase, large subunit [Desulfococcus oleovorans
            Hxd3]
 gi|158508964|gb|ABW65931.1| carbamoyl-phosphate synthase, large subunit [Desulfococcus oleovorans
            Hxd3]
          Length = 1075

 Score = 1274 bits (3297), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 627/1086 (57%), Positives = 812/1086 (74%), Gaps = 20/1086 (1%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD+ KILI+GAGPI+I QACEFDYSGTQACKALKEEGY V+L+NSNPATIMTDP  AD
Sbjct: 3    KRTDIEKILIIGAGPIIISQACEFDYSGTQACKALKEEGYSVVLVNSNPATIMTDPEFAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+TPE V  ++EKERP A+LPT+GGQT LN AVA+AE G LEK+ VE+IGA L A
Sbjct: 63   ATYIEPVTPEAVAAIIEKERPCAILPTLGGQTGLNTAVAVAEMGVLEKFNVEMIGASLSA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            IKKAEDRDLF++AM  IG++ P SGI  ++D+  +IA+EIG  PLI+RP+FTLGGTGGG+
Sbjct: 123  IKKAEDRDLFRKAMNNIGLRIPRSGIATSMDQVRAIADEIG-LPLIVRPSFTLGGTGGGV 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            A+ + E +A+   GL ASL +QV++E+S++GWKEYELEVMRD ADNVVIICSIEN+DPMG
Sbjct: 182  AHTQAELDALSAGGLEASLINQVMIEESVVGWKEYELEVMRDRADNVVIICSIENLDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTG+SITVAP QTL+DKEYQ +RD SIAI+REIGV+ GGSNVQFAVNP +GE++V+EMN
Sbjct: 242  VHTGESITVAPIQTLSDKEYQVMRDASIAIMREIGVDTGGSNVQFAVNPANGEMVVVEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRF 447
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD+I NDIT +T A+FEP++DY V KIPR+
Sbjct: 302  PRVSRSSALASKATGFPIAKIAAKLAVGYTLDEIANDITGETRAAFEPTLDYCVVKIPRW 361

Query: 448  AFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDWE 507
             FEKFP ++  L+T MKSVGE MA+GRTF+E+ QK +RSLE    G G     ++D   +
Sbjct: 362  TFEKFPETKDELSTSMKSVGETMAIGRTFKEALQKGIRSLEISRFGLGADGADKIDPSIQ 421

Query: 508  QLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSVS 567
            ++   L  PN +R+  +  A++KG  +D+I+ L+ ID WFL Q ++++ VE+ L+     
Sbjct: 422  EITDKLATPNSERLFYLRYALQKGFTIDDIYRLTRIDPWFLDQIEKILFVEKTLIEHK-D 480

Query: 568  NMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTPY 627
            N++ D  +  KR GFSD Q+A  T  TE+E+R  R   G+ P YK VDTCAAEF+A TPY
Sbjct: 481  NLSADLLWRAKREGFSDVQLAHITGKTEEEIRALRYEAGLRPVYKLVDTCAAEFKAATPY 540

Query: 628  MYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSNP 687
             YS+Y+ E E+  + +KKV+ILGGGPNRIGQGIEFDYCC H SF+L+  G E+IM+NSNP
Sbjct: 541  YYSTYETENEARVSDRKKVVILGGGPNRIGQGIEFDYCCVHASFALREEGVESIMVNSNP 600

Query: 688  ETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHRL 747
            ETVSTDYDTSD+LYFEPLTVEDVL++ID E+ +G+IVQFGGQTPL ++    + L     
Sbjct: 601  ETVSTDYDTSDKLYFEPLTVEDVLHIIDTEKCDGVIVQFGGQTPLNIA----EALARAGA 656

Query: 748  PSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEIGY 807
            P         I GTSP+SI  +EDR+ F A++ +L + QP  G A +  +A AIA+ +GY
Sbjct: 657  P---------IIGTSPESIRRSEDRKFFAAMLSKLGLLQPPNGTAVNVEEAAAIAQNLGY 707

Query: 808  PVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALADS 867
            PV+VRPS+VLGGRAM+IVYT   L  +  +A++  P+ P+L+DK+L DAIE+DVDA++D+
Sbjct: 708  PVIVRPSFVLGGRAMKIVYTPAELANFARHAIKASPKHPILVDKFLEDAIELDVDAISDT 767

Query: 868  CGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNCQ 927
             G+ VIGGIMEHIE+AG+HSGDSAC++P  ++    +D I   T  +A  L V GLMN Q
Sbjct: 768  TGHTVIGGIMEHIEEAGIHSGDSACVLPPHSVKPHVIDEIIRATKAMAAELKVVGLMNVQ 827

Query: 928  YAITTSGD-VYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVI-PK 985
            YA+   GD +Y++E NPRASRTVPFVSKA G  LAK A  VM G++L +LG   +     
Sbjct: 828  YAV--KGDTLYVIEVNPRASRTVPFVSKATGVALAKAATKVMLGRTLKELGIVDDAWRTA 885

Query: 986  HVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVF 1045
            H++VKEAV PF +F   D LLGPEM+STGEVMG+DM F  AFAKAQ+ AGQKLP+ G VF
Sbjct: 886  HIAVKEAVFPFNRFPDVDTLLGPEMKSTGEVMGLDMDFGAAFAKAQLGAGQKLPVKGNVF 945

Query: 1046 LSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVA 1105
            +S+ D  K     IA+   D GF+IV+T+GTA FL+ + IAV  + K+ +G PH  D + 
Sbjct: 946  ISVQDKDKRATAGIARQLSDAGFEIVATAGTAAFLKEQRIAVRPINKVSDGHPHVVDAIV 1005

Query: 1106 NGQIQMMVITSSG-DSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTVTM 1164
            NG+IQ+++ T +G DS  + DG  +RR  L  +VP  TT+ GALA    I  LK   + +
Sbjct: 1006 NGEIQLVINTGTGQDSQVKRDGYMIRRTTLRCQVPYATTLPGALAVCRGILQLKKQALGV 1065

Query: 1165 TALQDF 1170
             ++Q++
Sbjct: 1066 KSIQEY 1071


>gi|386718392|ref|YP_006184718.1| carbamoyl-phosphate synthase large subunit [Stenotrophomonas
            maltophilia D457]
 gi|384077954|emb|CCH12543.1| Carbamoyl-phosphate synthase large chain [Stenotrophomonas
            maltophilia D457]
          Length = 1080

 Score = 1274 bits (3296), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 629/1068 (58%), Positives = 803/1068 (75%), Gaps = 21/1068 (1%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTDL+ ILI+GAGPIVIGQACEFDYSG QACKAL++EGY V+L+NSNPATIMTDP +AD
Sbjct: 3    KRTDLKTILIIGAGPIVIGQACEFDYSGAQACKALRDEGYRVVLVNSNPATIMTDPEMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
              YI P+  + VE+++ KE+PDALLPTMGGQTALN A+ LA++G LEKY VELIGAK +A
Sbjct: 63   AVYIEPINWQTVEKIIAKEKPDALLPTMGGQTALNCALDLADNGVLEKYNVELIGAKREA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I+ AEDR+LF+ AM  IG++ P + + +TLDE + I   +G +P IIRP+FTLGG+GGGI
Sbjct: 123  IRMAEDRELFRVAMGEIGLECPTAAVAHTLDEALEIQTRVG-YPTIIRPSFTLGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EE   I   GL  S T++VLVE+S+LGWKE+E+EV+RD ADN +I+CSIEN+DPMG
Sbjct: 182  AYNREELVEIVSRGLELSPTTEVLVEESVLGWKEFEMEVVRDTADNCIIVCSIENLDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQRLRD SIA++R+IGV+ GGSNVQF +NP  G V+VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQRLRDASIAVLRKIGVDTGGSNVQFGINPKTGRVVVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKK-TPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ N+IT   TPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGYTLDELKNEITGGLTPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDW-D 505
            FAFEKFP ++  LTTQMKSVGE MA+GRTFQES QKALR LE G  G+  + +   +  D
Sbjct: 362  FAFEKFPAADARLTTQMKSVGEVMAMGRTFQESVQKALRGLETGKVGFDPTGLDLANEDD 421

Query: 506  WEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQS 565
             + L+  L+ P P+R+  +  A + GM V+EI+ LSFID WFL Q +E+I  E  +    
Sbjct: 422  LQTLRRELKAPGPERLFFVADAFRAGMSVEEIYALSFIDHWFLDQIEEIIAAEGEVAAGG 481

Query: 566  VSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANT 625
            +  +      ++KR GFSD ++A  T + E  +R  R +  V P YKRVD+CA EF   T
Sbjct: 482  IDALDAARLRKLKRAGFSDARLAQLTGTNEAAIRALRRAHKVRPVYKRVDSCAGEFSTGT 541

Query: 626  PYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNS 685
             Y+YS+Y+ ECE+AP+ + K++ILGGGPNRIGQGIEFDYCC H + +L+  GYETIM+N 
Sbjct: 542  AYLYSTYEDECEAAPSNRDKIMILGGGPNRIGQGIEFDYCCVHAALALREDGYETIMVNC 601

Query: 686  NPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEH 745
            NPETVSTDYDTSDRLYFEPLT+EDVL +++LE+P+G+IVQ+GGQTPLKL+          
Sbjct: 602  NPETVSTDYDTSDRLYFEPLTLEDVLEIVELEQPKGVIVQYGGQTPLKLA---------- 651

Query: 746  RLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEI 805
            R   A+G   V + GTSPDSID AEDRERF  ++  L ++QP   IA+++ +AL +A+EI
Sbjct: 652  RALEANG---VPVIGTSPDSIDLAEDRERFQQLVDTLGLKQPPNRIARNDQEALLLAREI 708

Query: 806  GYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALA 865
            GYP+VVRPSYVLGGRAMEIVY +  L  Y+ +AV+V  + PVL+D++L +A+E DVD +A
Sbjct: 709  GYPLVVRPSYVLGGRAMEIVYGEADLARYVRDAVKVSNDSPVLLDRFLDNAVECDVDIIA 768

Query: 866  DSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMN 925
            D+ GNV+IGG+MEHIE+AGVHSGDS+C +P  ++S+     +    ++LAK LNV GLMN
Sbjct: 769  DAQGNVLIGGVMEHIEEAGVHSGDSSCSLPPYSLSAETQAELRRQVVELAKALNVVGLMN 828

Query: 926  CQYAITTSGD----VYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKE 981
             Q+AI TS +    +YLLE NPRASRTVPFVSKA G PLAK AA  M+GK+L + G TKE
Sbjct: 829  TQFAIQTSDEGADTIYLLEVNPRASRTVPFVSKATGMPLAKIAARCMAGKTLAEQGATKE 888

Query: 982  VIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLS 1041
            ++P + SVKEA+ PF KFQG D +LGPEMRSTGEVMG+  +F  AFA+AQ A G K P  
Sbjct: 889  IVPDYYSVKEAIFPFAKFQGVDPILGPEMRSTGEVMGVGRTFNAAFARAQEAGGIKAPPV 948

Query: 1042 GTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAG 1101
            G  F+S+ D  K  +  +AKA L  G+ +V+T GTA +L+  G+  E + K+ EGRPH  
Sbjct: 949  GKAFVSVRDPDKKRVLPVAKALLARGYSLVATRGTAAWLQQHGMDCEIINKVVEGRPHIV 1008

Query: 1102 DMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALA 1149
            D + NG+I  +V T+ G S    D   +RR  L ++V   TT++GA A
Sbjct: 1009 DSIKNGEIVYIVNTTEGRSAIN-DSFSIRREALQHRVTYSTTIAGAKA 1055


>gi|387815589|ref|YP_005431079.1| carbamoyl-phosphate synthase large subunit [Marinobacter
            hydrocarbonoclasticus ATCC 49840]
 gi|381340609|emb|CCG96656.1| carbamoyl-phosphate synthase large subunit [Marinobacter
            hydrocarbonoclasticus ATCC 49840]
          Length = 1072

 Score = 1274 bits (3296), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 628/1078 (58%), Positives = 811/1078 (75%), Gaps = 21/1078 (1%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILILGAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPAMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+T + VE+++EKE+PDALLPTMGGQTALN A+ L + G LEK+GVE+IGA  D 
Sbjct: 63   ATYIEPITWKTVEKIIEKEKPDALLPTMGGQTALNCALDLEKHGVLEKHGVEMIGANADT 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDRD F +AMK IG++ P + I +++DE   I+ +IG FP IIRP+FT+GG+GGGI
Sbjct: 123  IDKAEDRDRFDKAMKKIGLECPRAAIAHSMDEAWKISEDIG-FPCIIRPSFTMGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYNK+EFE IC  GL  S T+++L+++SL+GWKEYE+EV+RD  DN +I+C+IEN D MG
Sbjct: 182  AYNKDEFEEICTRGLDLSPTNELLIDESLIGWKEYEMEVVRDKNDNCIIVCAIENFDAMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGVE GGSNVQF +NP  G ++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQIMRNASLAVLREIGVETGGSNVQFGINPDTGRMVVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKK-TPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ N+IT   TPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGYTLDELQNEITGGVTPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWD- 505
            F FEKFP ++  LTTQMKSVGE MA+GRTFQES QKALR LE G  G+    ++ELD + 
Sbjct: 362  FTFEKFPQADARLTTQMKSVGEVMAIGRTFQESVQKALRGLEVGSEGFD-EKLEELDSEN 420

Query: 506  -WEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQ 564
              E L   L VP  +R+  I  A + GM VDE+   + +D W+L Q ++++  EQ L + 
Sbjct: 421  SRETLTRELNVPGAERIWYIGDAFRAGMTVDEVFRHTKVDPWYLVQIEDIVREEQALKSA 480

Query: 565  SVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEAN 624
              +++ K   + +KR+GFSD ++A     +E  +R+ R  LG+ P YKRVDTCAAEF ++
Sbjct: 481  GKADIDKATLFRLKRKGFSDARLAKLLGISEVSLRKLRHDLGIRPVYKRVDTCAAEFASD 540

Query: 625  TPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMN 684
            T YMYS+Y+ ECE+ P+ ++K++++GGGPNRIGQGIEFDYCC H + +++  GYETIM+N
Sbjct: 541  TAYMYSTYEEECEAEPSDREKIVVIGGGPNRIGQGIEFDYCCVHAALAMREDGYETIMIN 600

Query: 685  SNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDE 744
             NPETVSTDYDTSDRLYFEP+T+EDVL +I++E+P+G+IVQ+GGQTPLKL+         
Sbjct: 601  CNPETVSTDYDTSDRLYFEPITLEDVLEIINVEKPKGVIVQYGGQTPLKLA--------- 651

Query: 745  HRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKE 804
             R   A+G   V I GTSPD+ID AEDRERF  +I+ L ++QP+    +S  + +  A+E
Sbjct: 652  -RGLEAAG---VPIIGTSPDAIDRAEDRERFQQMIQRLGLKQPENATVRSHEEGIVAARE 707

Query: 805  IGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDAL 864
            IGYP+VVRPSYVLGGRAMEIVY +  LV Y+ NAV V  + PVL+D +L+ AIE+D+DA+
Sbjct: 708  IGYPLVVRPSYVLGGRAMEIVYDETELVRYMRNAVLVSNDSPVLLDHFLNAAIEVDIDAI 767

Query: 865  ADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLM 924
            +D   +VVIGGIM+HIEQAGVHSGDSAC +P  ++S    D +     K+A  L+V GLM
Sbjct: 768  SDGT-DVVIGGIMQHIEQAGVHSGDSACSLPPYSLSKQVQDEMREAVKKMAIELDVIGLM 826

Query: 925  NCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIP 984
            N Q A    G++Y++E NPRASRTVPFVSKAIG  LA  AA VMSGKSL +L FT+E++P
Sbjct: 827  NVQLAY-QDGEIYVIEVNPRASRTVPFVSKAIGVSLAAVAARVMSGKSLKELNFTQEIVP 885

Query: 985  KHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTV 1044
             + +VKE+V PF KF   D +LGPEM+STGEVMG+  SF  AFAKA +A G++LP  G  
Sbjct: 886  TYYAVKESVFPFNKFPAVDPILGPEMKSTGEVMGLGDSFDEAFAKAALAVGERLPAQGVA 945

Query: 1045 FLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMV 1104
            F+S+ D+ KP    +A+  +D GF+I++T+GTA  LE +GIAVERV K+ EGRPH  D +
Sbjct: 946  FMSVRDVDKPGAASVARDLVDAGFRIIATTGTAKALEAEGIAVERVNKVREGRPHIVDAI 1005

Query: 1105 ANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTV 1162
             NGQ+Q+++ T+ G      D  ++R+  L  KV   TT++G  A   AI+     TV
Sbjct: 1006 KNGQVQLIINTTEGRKAIS-DSAQIRQSALQTKVTYTTTLAGGEAFCRAIKFGPERTV 1062


>gi|311108161|ref|YP_003981014.1| carbamoyl-phosphate synthase large chain [Achromobacter xylosoxidans
            A8]
 gi|310762850|gb|ADP18299.1| carbamoyl-phosphate synthase large chain [Achromobacter xylosoxidans
            A8]
          Length = 1079

 Score = 1274 bits (3296), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 646/1078 (59%), Positives = 814/1078 (75%), Gaps = 27/1078 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTDL+ ILI+GAGPI+IGQACEFDYSG QACKALK EGY  IL+NSNPATIMTDP  AD
Sbjct: 3    KRTDLKSILIIGAGPIIIGQACEFDYSGAQACKALKAEGYRTILVNSNPATIMTDPETAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+T + VE+++E+E+PDALLPTMGGQTALN A+ LA  G L+K+ VELIGA   A
Sbjct: 63   VTYIEPITWQAVEKIIEREKPDALLPTMGGQTALNCALDLAHHGVLKKHNVELIGANEHA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECIS----IANEIGE--FPLIIRPAFTLG 261
            I+KAEDR  FKQAM  IG+++  SG+ +++DE       IA E+G   FP +IRP+FT+G
Sbjct: 123  IEKAEDRQKFKQAMTDIGLESAKSGVAHSMDEAWEVQRRIAAEVGTSGFPAVIRPSFTMG 182

Query: 262  GTGGGIAYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIE 321
            G+GGGIAYN EEFE IC+ GL AS TS++L+E+SLLGWKE+E+EV+RD ADN +I+CSIE
Sbjct: 183  GSGGGIAYNAEEFETICRRGLEASPTSELLIEESLLGWKEFEMEVVRDKADNCIIVCSIE 242

Query: 322  NVDPMGVHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEV 381
            N+DPMGVHTGDSITVAPAQTLTDKEYQ +R+ SIA++REIGV+ GGSNVQFAVNP DG +
Sbjct: 243  NLDPMGVHTGDSITVAPAQTLTDKEYQIMRNASIAVLREIGVDTGGSNVQFAVNPRDGRM 302

Query: 382  MVIEMNPRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITK-KTPASFEPSIDYV 440
            +VIEMNPRVSRSSALASKATGFPIAK+AA+L+VGY+LD++ N+IT   TPASFEPSIDYV
Sbjct: 303  IVIEMNPRVSRSSALASKATGFPIAKVAARLAVGYTLDELKNEITGGATPASFEPSIDYV 362

Query: 441  VTKIPRFAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVK 500
            VTK+PRFAFEKFP ++  LTTQMKSVGE MA+GRTFQESFQKALR LE G  G     + 
Sbjct: 363  VTKVPRFAFEKFPTADARLTTQMKSVGEVMAIGRTFQESFQKALRGLEVGVDG-----LN 417

Query: 501  ELDWDWEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQF 560
            +   D E+L+  L  P P+R+  +  A  +G  +DE+H ++ ID WFL+Q KE++D+E  
Sbjct: 418  QKTTDREKLQVELGEPGPERIWYVGDAFAQGFTLDEVHNITHIDPWFLSQIKEIVDIELA 477

Query: 561  LLTQSVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAE 620
            L  ++++++     +E+KRRGFSD+++AF   S+E EVR+ R  L V P YKRVDTCAAE
Sbjct: 478  LEQKTLADLDYATLWELKRRGFSDRRLAFLLDSSESEVRKLRHQLNVRPVYKRVDTCAAE 537

Query: 621  FEANTPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYET 680
            F   T YMYS+Y+ ECE+APT +KK+++LGGGPNRIGQGIEFDYCC H + +L+  GYET
Sbjct: 538  FATRTAYMYSTYEEECEAAPTDRKKIVVLGGGPNRIGQGIEFDYCCVHAALALRDDGYET 597

Query: 681  IMMNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQ 740
            IM+N NPETVSTDYDTSDRLYFEPLT+EDVL ++  E P G+IVQ+GGQTPLKL+     
Sbjct: 598  IMVNCNPETVSTDYDTSDRLYFEPLTLEDVLEIVHKENPVGMIVQYGGQTPLKLA----- 652

Query: 741  YLDEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALA 800
                 R   A+G   V I GTSP+SID AEDRERF  ++ +L + QP    A++E +ALA
Sbjct: 653  -----RALEANG---VPIIGTSPESIDVAEDRERFQKLLNKLGLRQPPNRTARTEGEALA 704

Query: 801  IAKEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEID 860
             A EIGYP+VVRPSYVLGGRAMEIV+  + L  Y+  AV+V  + PVL+D++L++A E+D
Sbjct: 705  HAAEIGYPLVVRPSYVLGGRAMEIVHEQQDLERYMREAVKVSNDSPVLLDRFLNNATEVD 764

Query: 861  VDALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNV 920
            VD LAD    V IGG+MEHIEQAGVHSGDSAC +P  ++S+  +  I   T  +AK LNV
Sbjct: 765  VDCLADG-ETVFIGGVMEHIEQAGVHSGDSACSLPPYSLSAEVIAEIKRQTTMMAKALNV 823

Query: 921  CGLMNCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTK 980
             GLMN Q+AI   GDVY+LE NPRASRTVP+VSKA G  LAK AA  M+G++L   G TK
Sbjct: 824  SGLMNVQFAI-QGGDVYVLEVNPRASRTVPYVSKATGLQLAKIAARAMAGQTLAAQGITK 882

Query: 981  EVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPL 1040
            EV+P + SVKEAV PF KF G D +LGPEM+STGEVMG+  SF  AF K+Q+AAG +LP 
Sbjct: 883  EVVPPYFSVKEAVFPFVKFPGVDTILGPEMKSTGEVMGVGTSFGEAFVKSQLAAGVRLPE 942

Query: 1041 SGTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHA 1100
            SGTVF+S+ +  KP    +A+    +GFK+V+T GTA  +E  GI V+ V K++EGRPH 
Sbjct: 943  SGTVFISVKNQDKPLAVEVARGLHALGFKLVATRGTAAEIESAGIPVQLVNKVNEGRPHI 1002

Query: 1101 GDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLK 1158
             DMV NG+I +++ T         D   +R + LA +V   TT++GA A  E ++ L+
Sbjct: 1003 VDMVKNGEIALVINTVEERRNAIADSRTIRTQALAARVTFFTTIAGARAAVEGMQYLR 1060


>gi|337288813|ref|YP_004628285.1| carbamoyl-phosphate synthase, large subunit [Thermodesulfobacterium
            sp. OPB45]
 gi|334902551|gb|AEH23357.1| carbamoyl-phosphate synthase, large subunit [Thermodesulfobacterium
            geofontis OPF15]
          Length = 1087

 Score = 1274 bits (3296), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 637/1091 (58%), Positives = 831/1091 (76%), Gaps = 22/1091 (2%)

Query: 86   LGKRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGL 145
            + KRTD+++ILI+G+GPI+IGQACEFDYSG+QACKALKEEGYE++L+NSNPATIMTDP +
Sbjct: 1    MPKRTDIKRILIIGSGPIIIGQACEFDYSGSQACKALKEEGYEIVLVNSNPATIMTDPEM 60

Query: 146  ADRTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKL 205
            ADRTYI P+TPE +E ++++ERPDALLPT+GGQT LN+A ALA+ G LEKY VELIGAK 
Sbjct: 61   ADRTYIEPLTPETLEYIIKEERPDALLPTLGGQTGLNIAFALAKKGVLEKYKVELIGAKA 120

Query: 206  DAIKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGG 265
            +AI+KAE R+LFK+AM+ IG+K P S I +++ +   +  EIG FP+IIRP+FTLGGTGG
Sbjct: 121  EAIEKAESRELFKKAMENIGLKVPKSAIVHSVSQAEKVVKEIG-FPVIIRPSFTLGGTGG 179

Query: 266  GIAYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDP 325
            G+AYN EE   I + GL  SL  QV++E+S++GWKE+ELEVMRD  DNVVIICSIEN DP
Sbjct: 180  GVAYNIEELRDIVEMGLEMSLIHQVMLEESVIGWKEFELEVMRDFKDNVVIICSIENFDP 239

Query: 326  MGVHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIE 385
            MGVHTGDSITVAPAQTL+DKEYQR+R  + AIIREIGVE GGSN+QFA+NP +G+++VIE
Sbjct: 240  MGVHTGDSITVAPAQTLSDKEYQRMRTAAQAIIREIGVETGGSNIQFAINPKNGDMVVIE 299

Query: 386  MNPRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIP 445
            MNPRVSRSSALASKATG+PIAK+AAKL+VGY+LD++PNDITK+T A+FEP+IDYVV KIP
Sbjct: 300  MNPRVSRSSALASKATGYPIAKIAAKLAVGYTLDELPNDITKETKAAFEPTIDYVVVKIP 359

Query: 446  RFAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWD 505
            RF FEKFP     +TT M+SVGE MA+GRTF+E+ QKA+R LE G  G+G       D  
Sbjct: 360  RFTFEKFPECPDEITTSMRSVGETMAIGRTFKEALQKAIRGLEIGRFGFGADGKSPSDQG 419

Query: 506  W----EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFL 561
                 + ++  L  PN  R+  I  A K G  ++EI+ L++ID WFL   KE+ D  + L
Sbjct: 420  IILPKDLIREKLVRPNSQRLFYIKEAFKAGFTIEEIYNLTYIDPWFLYHLKEIFDKSEAL 479

Query: 562  LTQSVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEF 621
              +S+  +++++  E+K+ GFSD QIAF T +TE EVRE R SLG+ P++K +DTCAAEF
Sbjct: 480  KGKSLKEISEEEMRELKQMGFSDYQIAFLTGTTEFEVREYRKSLGIKPTFKLIDTCAAEF 539

Query: 622  EANTPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETI 681
            EA TPY YSS++ E ES  ++ +K+LI+GGGPNRIGQGIEFDYCC H S +L+  G E+I
Sbjct: 540  EAYTPYYYSSWEVENESRVSKNRKILIIGGGPNRIGQGIEFDYCCVHASLALKERGIESI 599

Query: 682  MMNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQY 741
            M+NSNPETVSTDYD S RLYFEPLT+E +LN+ + E PEG+IVQFGGQTPL L++P+++ 
Sbjct: 600  MVNSNPETVSTDYDISTRLYFEPLTLEHILNICEEENPEGVIVQFGGQTPLNLAVPLYK- 658

Query: 742  LDEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAI 801
                     +G   V+I GTSP++ID AEDRE+F+ ++++L +++PK G A S  +A+ +
Sbjct: 659  ---------AG---VKILGTSPENIDRAEDREKFDKLLEKLGLKRPKAGTAYSVDEAIKV 706

Query: 802  AKEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDV 861
            A++IGYP++VRPSYVLGGRAM IVYT+E L +++E AV+V+PE P+LIDK+L DAIEIDV
Sbjct: 707  AQKIGYPLLVRPSYVLGGRAMRIVYTEEELKSFIETAVKVNPEYPILIDKFLEDAIEIDV 766

Query: 862  DALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVC 921
            DA++D    VV+ GIMEHIE+AG+HSGDSAC++P   I    +D I   T  LAK L V 
Sbjct: 767  DAISDG-EIVVVAGIMEHIEEAGIHSGDSACILPPLHIPPKLIDEIKEATTLLAKELEVK 825

Query: 922  GLMNCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKE 981
            GL+N QYAI  + ++Y+LE NPRASRT+PFVSKAIG PLAK A  +M G+ L D+GFTKE
Sbjct: 826  GLINVQYAIKNN-ELYVLEVNPRASRTIPFVSKAIGVPLAKLATWIMIGERLKDIGFTKE 884

Query: 982  VIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLS 1041
            VIP + SVKE V PF++F   DV+LGPEM+STGEVMGID    +A+AKAQ+AAG KLP  
Sbjct: 885  VIPPYYSVKEVVFPFKRFPQVDVMLGPEMKSTGEVMGIDWDPALAYAKAQLAAGMKLPTE 944

Query: 1042 GTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEG-RPHA 1100
            G VF+S+ D  KP +  IAK   D+GFK+++T GTA FL+  GI V  V K+ E  RP+ 
Sbjct: 945  GKVFISIKDEDKPLVVPIAKTLEDLGFKLIATKGTAQFLKSFGIEVTEVPKISEHIRPNI 1004

Query: 1101 GDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSN 1160
             D++ N +I + + T+ G    + D   +RR  +   +P  TT+S A A  E+I++LK  
Sbjct: 1005 LDLLKNKEIALAINTAKGKE-SKDDAYLIRRYTMELDIPYATTLSCAKAMVESIKTLKVK 1063

Query: 1161 TVTMTALQDFF 1171
            + + T LQ ++
Sbjct: 1064 SFSFTPLQKYY 1074


>gi|161510953|ref|YP_089428.2| carbamoyl phosphate synthase large subunit [Mannheimia
            succiniciproducens MBEL55E]
          Length = 1070

 Score = 1273 bits (3295), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 625/1077 (58%), Positives = 813/1077 (75%), Gaps = 23/1077 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KR D+  ILI+GAGPIVIGQACEFDYSG QACKAL+EEGY+V+L+NSNPATIMTDP +AD
Sbjct: 3    KRNDINTILIIGAGPIVIGQACEFDYSGAQACKALREEGYKVVLVNSNPATIMTDPNMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  + VE+++EKERPDA+LPTMGGQTALN A+ L+++G L+KYGVELIGA  DA
Sbjct: 63   VTYIEPIHWQTVEKIIEKERPDAILPTMGGQTALNCALDLSKNGVLKKYGVELIGATEDA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  FK+AM  IG+ TP S + ++ DE      E+G FP +IRP+FT+GG+GGGI
Sbjct: 123  IDKAEDRGRFKEAMAKIGLNTPKSFVCHSFDEAWKAQEEVG-FPTLIRPSFTMGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN++EF+AIC+ G  AS T ++L+E+S+LGWKEYE+EV+RD ADN +I+CSIEN DPMG
Sbjct: 182  AYNRDEFQAICERGFEASPTHELLIEQSVLGWKEYEMEVVRDKADNCIIVCSIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGV+ GGSNVQFA+NP +GE++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQIMRNASLAVLREIGVDTGGSNVQFAINPENGEMIVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKK-TPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+L+++ NDIT    PASFEPSIDYVVTK+PR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGYTLNELRNDITGGLIPASFEPSIDYVVTKVPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            FAFEKFP ++  LTTQMKSVGE MA+GRTFQES QKALR LE G  G+   N+K    D 
Sbjct: 362  FAFEKFPKADDRLTTQMKSVGEVMAMGRTFQESIQKALRGLETGICGF---NLKT--EDM 416

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
            E+L++ +  P P+R+  +  A   G  ++++H  S ID WFL Q ++L+  E  L  +++
Sbjct: 417  EKLRHEISNPGPERLLYVADAFGIGWSIEDVHHYSKIDPWFLIQIQDLVLEELALEKKTL 476

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
            +++ KD+ Y +KR+GFSDK+IA   KS E  VR  R +  + P YKRVDTCA EF+++T 
Sbjct: 477  ADLNKDEIYRLKRKGFSDKRIAQLVKSDETSVRSLRNAFNIHPVYKRVDTCAGEFKSDTA 536

Query: 627  YMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSN 686
            Y+YS+Y+ ECE+AP+ +KKV+ILGGGPNRIGQGIEFDYCC H + +L+ +G+ETIM+N N
Sbjct: 537  YLYSTYEEECEAAPSDRKKVMILGGGPNRIGQGIEFDYCCVHAALALRESGFETIMVNCN 596

Query: 687  PETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHR 746
            PETVSTD+DTSDRLYFEPLT+EDVL +I +E+P G+IV +GGQTPLKL+  +H       
Sbjct: 597  PETVSTDFDTSDRLYFEPLTLEDVLEIIHVEKPWGVIVHYGGQTPLKLANALH------- 649

Query: 747  LPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEIG 806
               A+G   V I GTS DSIDAAEDRERF  I+ +L+++QP    A++  +A+ +A E+G
Sbjct: 650  ---ANG---VNIIGTSADSIDAAEDRERFQKILHDLNLKQPANRTARNTQEAVGLANEVG 703

Query: 807  YPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALAD 866
            YP+VVRPSYVLGGRAM+IVY DE L  Y+  AV V  + P+L+D +L++AIE+DVD + D
Sbjct: 704  YPLVVRPSYVLGGRAMQIVYNDEELNRYMREAVSVSNDSPILLDHFLNNAIEVDVDCICD 763

Query: 867  SCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNC 926
                V+IGGIM+HIEQAG+HSGDSAC +P  ++S    D I   T  +A+ LNV GLMN 
Sbjct: 764  G-EQVIIGGIMQHIEQAGIHSGDSACSLPPYSLSMEIQDEIRRQTAAMARALNVVGLMNV 822

Query: 927  QYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPKH 986
            Q+A+     +Y+LE NPRASRTVPFVSKA G PLAK AA VM+G SL + G   EV+P+ 
Sbjct: 823  QFAVQNDV-IYVLEVNPRASRTVPFVSKATGQPLAKIAARVMAGISLKEQGIQGEVVPQD 881

Query: 987  V-SVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVF 1045
              +VKEAV PF KF G D +LGPEMRSTGEVMG+  +F  AF KAQI AG+++P +G VF
Sbjct: 882  FYAVKEAVFPFIKFPGVDTILGPEMRSTGEVMGVGATFAEAFLKAQIGAGERIPRTGKVF 941

Query: 1046 LSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVA 1105
            +S+++  KP L  I K   + G+ + +T GTA FL   GIAV+ V K+ EGRPH  D + 
Sbjct: 942  VSVDNNDKPRLLPIVKRLQEQGYGLCATFGTAKFLRENGIAVQTVNKVREGRPHIVDAIK 1001

Query: 1106 NGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTV 1162
            N +I +++ T+ G +    D   +R   L  +VP+ TT++GA A + ++ +L  + V
Sbjct: 1002 NDEIALIINTAGGMAESVADSASIRASALKQRVPLYTTIAGADAISLSVANLDIHDV 1058


>gi|77166030|ref|YP_344555.1| carbamoyl-phosphate synthase, large subunit, glutamine-dependent
            [Nitrosococcus oceani ATCC 19707]
 gi|254436388|ref|ZP_05049894.1| carbamoyl-phosphate synthase, large subunit [Nitrosococcus oceani
            AFC27]
 gi|76884344|gb|ABA59025.1| carbamoyl-phosphate synthase large subunit [Nitrosococcus oceani ATCC
            19707]
 gi|207088078|gb|EDZ65351.1| carbamoyl-phosphate synthase, large subunit [Nitrosococcus oceani
            AFC27]
          Length = 1073

 Score = 1273 bits (3295), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 627/1084 (57%), Positives = 812/1084 (74%), Gaps = 20/1084 (1%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KR D+  I+ILGAGPIVIGQACEFDYSG QACK+LKEEGY VIL+NSNPATIMTDP LAD
Sbjct: 3    KRNDINSIVILGAGPIVIGQACEFDYSGAQACKSLKEEGYRVILVNSNPATIMTDPELAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+T + V +++EKERPDALLPTMGGQTALN A+ LA  G LE+Y VE+IGA  +A
Sbjct: 63   ATYIEPITWKTVAKIIEKERPDALLPTMGGQTALNCALDLAREGILERYDVEMIGANQEA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDRDLF+QAM+ IG+  P S I ++L+E      ++G FP++IRP+FTLGG+GGGI
Sbjct: 123  INKAEDRDLFRQAMQKIGLDMPRSAIAHSLEEAQQAQRDLG-FPIVIRPSFTLGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEF  IC+ GL  S  S++L+++S+LGWKE+E+EV+RD  DN +IIC+IEN+DPMG
Sbjct: 182  AYNREEFVEICERGLDLSPNSELLIDESVLGWKEFEMEVVRDSKDNCIIICTIENLDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ +RD ++A++REIGV+ GGSNVQFAV+P +G +++IEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQVMRDAALAVLREIGVDTGGSNVQFAVDPENGRLIIIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKK-TPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ N+IT   TPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGYTLDELQNEITGGLTPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            F FEKFP ++  LTTQMKSVGE MA+GR FQES QKALRSLE G  G+        +   
Sbjct: 362  FTFEKFPRADARLTTQMKSVGEVMAIGRNFQESLQKALRSLETGTDGFNEKVDLAAEDVV 421

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
            E L+Y LRVP+ DR+  +  A + G  + EI++LS ID WFLTQ ++L++VEQ L   S+
Sbjct: 422  ETLRYQLRVPSADRIYYLADAFRAGFSMAEIYDLSHIDPWFLTQIQDLVEVEQGLRGTSL 481

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
              + KD  Y +KR+GFSD+++A    + E+EVR +R +LG+ P YKRVDTC AEF   T 
Sbjct: 482  EQVEKDRLYRLKRQGFSDRRLAVLLGAGEEEVRRRRHTLGIRPVYKRVDTCGAEFATTTA 541

Query: 627  YMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSN 686
            Y+YS+YD ECE+ P+Q+ K+++LGGGPNRIGQGIEFDYCC H + +L+  GYETIM+N N
Sbjct: 542  YLYSTYDEECEAVPSQRNKIMVLGGGPNRIGQGIEFDYCCVHAALALREDGYETIMVNCN 601

Query: 687  PETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHR 746
            PETVSTDYDTSDRLYFEPLT+EDVL +I LE+P+G+IVQ+GGQTPLKL+          R
Sbjct: 602  PETVSTDYDTSDRLYFEPLTLEDVLEIISLEQPQGVIVQYGGQTPLKLA----------R 651

Query: 747  LPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEIG 806
               A+G  ++   GTSPDSID AEDRERF  +I++L ++QP    A+++ +A+ +A EIG
Sbjct: 652  ALEAAGAPII---GTSPDSIDLAEDRERFQWLIEKLGLKQPPNRTARTQEEAIRLAAEIG 708

Query: 807  YPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALAD 866
            YP+VVRPSYVLGGRAMEIVY  + L  Y++ AV V  + PVL+D++L +A E+DVDA+ D
Sbjct: 709  YPLVVRPSYVLGGRAMEIVYNADELARYMKEAVSVSNDSPVLLDRFLDEATEVDVDAICD 768

Query: 867  SCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNC 926
                V++GGIMEHIEQAGVHSGDSAC +P  ++S++  + +      +A+ L V GLMN 
Sbjct: 769  G-EQVMVGGIMEHIEQAGVHSGDSACALPPFSLSAAVQNRLREQVYNMARELKVVGLMNT 827

Query: 927  QYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPKH 986
            Q+AI  + ++Y+LE NPRASRTVPFVSK IG PLAK AA  M G+SL   G  +E+IP +
Sbjct: 828  QFAI-QANEIYILEVNPRASRTVPFVSKTIGIPLAKVAARCMMGQSLAKQGMIEEIIPHY 886

Query: 987  VSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVFL 1046
             +VKEAV PF KF G D +LGPEM+STGEVMG    F  AF KA + AG  LP  G VF+
Sbjct: 887  FAVKEAVFPFIKFSGVDPILGPEMKSTGEVMGTGRCFGEAFYKALLGAGVVLPQKGKVFI 946

Query: 1047 SLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVAN 1106
            S+ D  K  +  +A+    +GF++++T GT+  L+ +G+A  ++ K+ EG+PH  DM+ N
Sbjct: 947  SVRDADKQRIVPVAQELSRLGFELLATRGTSTVLDQEGVACIQINKVLEGQPHIVDMIKN 1006

Query: 1107 GQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTVTMTA 1166
             +I +++ T+ G      D   +RR  L +KV   TTV+GA A  EA+R+  +++V    
Sbjct: 1007 DEIALIINTTEGRKAVS-DSYTIRRSALQHKVTYTTTVAGAWATCEALRAETTDSVYR-- 1063

Query: 1167 LQDF 1170
            LQD 
Sbjct: 1064 LQDL 1067


>gi|296136188|ref|YP_003643430.1| carbamoyl-phosphate synthase large subunit [Thiomonas intermedia K12]
 gi|295796310|gb|ADG31100.1| carbamoyl-phosphate synthase, large subunit [Thiomonas intermedia
            K12]
          Length = 1074

 Score = 1273 bits (3295), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 641/1091 (58%), Positives = 809/1091 (74%), Gaps = 30/1091 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KR+D++ ILI+GAGPIVIGQACEFDYSG QACKAL+EEGY+VIL+NSNPATIMTDP  AD
Sbjct: 3    KRSDIKSILIIGAGPIVIGQACEFDYSGAQACKALREEGYKVILVNSNPATIMTDPETAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+T ++VE ++EKERPDA+LPTMGGQTALN A+ L  +G L KYGVELIGAK  A
Sbjct: 63   VTYIEPITWQVVETIIEKERPDAILPTMGGQTALNCALDLHHNGVLGKYGVELIGAKPAA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I  AEDR  FKQAM  IG+ +  SGI +TL+E  ++   IG FP+IIRP+FTLGGTGGGI
Sbjct: 123  IDMAEDRQKFKQAMTRIGLGSARSGIAHTLEEAWAVQKTIG-FPVIIRPSFTLGGTGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN EEFE ICK G+ AS T+++L+E+SL+GWKE+E+EV+RD ADN +I+CSIEN+DPMG
Sbjct: 182  AYNPEEFETICKRGIEASPTNELLIEESLIGWKEFEMEVVRDSADNCIIVCSIENLDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ +R+ SIA++REIGV+ GGSNVQFAVNP DG ++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQIMRNASIAVLREIGVDTGGSNVQFAVNPKDGRLIVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKK-TPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT   TPASFEP+IDYVVTK+PR
Sbjct: 302  PRVSRSSALASKATGFPIAKIAAKLAVGYTLDELRNDITGGVTPASFEPTIDYVVTKVPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            FAFEKFP ++  LTTQMKSVGE MA+GRTFQESFQKALR LE G  G     + E   D 
Sbjct: 362  FAFEKFPQADSRLTTQMKSVGEVMAMGRTFQESFQKALRGLEVGVDG-----MNEKTQDR 416

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQ-S 565
            E L+  L  P P+R+  +  A  +GM +DE+H+L+ ID WFL Q + ++  E  L    +
Sbjct: 417  EVLEKELGEPGPERIWYVGDAFAQGMSLDEVHQLTRIDPWFLAQIQNIVQTELELERNFT 476

Query: 566  VSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANT 625
            +  + ++  Y +K++GFSD+++A    +TE  VR +R SL V P +KRVDTCAAEF   T
Sbjct: 477  LDQLDREHLYALKQKGFSDRRLAKLLHTTETAVRNRRRSLQVRPVFKRVDTCAAEFGTQT 536

Query: 626  PYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNS 685
             Y+YSSYD ECE+APT +KK+++LGGGPNRIGQGIEFDYCC H + ++++ GYET+M+N 
Sbjct: 537  AYLYSSYDEECEAAPTTRKKIMVLGGGPNRIGQGIEFDYCCVHAALAMRADGYETVMVNC 596

Query: 686  NPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEH 745
            NPETVSTDYDTSDRLYFEPLT+EDVL V+D ERP G+IVQ+GGQTPLKL+L +       
Sbjct: 597  NPETVSTDYDTSDRLYFEPLTLEDVLEVVDKERPTGVIVQYGGQTPLKLALDLE------ 650

Query: 746  RLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEI 805
                A+G   V I GTSPD ID AEDRERF  ++++L + QP    A+SEA+AL  A+EI
Sbjct: 651  ----ANG---VPIIGTSPDMIDMAEDRERFQHLVEQLGLLQPPNRTARSEAEALTKAEEI 703

Query: 806  GYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALA 865
            GYP+VVRPSYVLGGRAMEIV+    L  Y+  AV+V  + PVL+D++L+DAIE DVDA+ 
Sbjct: 704  GYPLVVRPSYVLGGRAMEIVHEQRDLERYMREAVKVSHDSPVLLDRFLNDAIECDVDAIC 763

Query: 866  DSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMN 925
            D    V IGG+MEHIEQAGVHSGDSAC +P  ++S++ +  I   T+KLA  L V GLMN
Sbjct: 764  DGT-EVFIGGVMEHIEQAGVHSGDSACSLPPYSLSAATVARIKEQTVKLAHGLKVVGLMN 822

Query: 926  CQYAITT---SGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEV 982
             Q+AI        ++LLE NPRASRTVPFVSKA G  LAK AA  M+G++L   G T+EV
Sbjct: 823  VQFAIQQLDGEDRIFLLEVNPRASRTVPFVSKATGLQLAKIAARCMAGQTLAQQGITREV 882

Query: 983  IPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLP--- 1039
             P +  VKEAV PF KF G D +LGPEM+STGEVMG+  +F  AF K+Q+AAG +LP   
Sbjct: 883  TPPYYCVKEAVFPFNKFPGVDPILGPEMKSTGEVMGVGRTFGEAFVKSQLAAGTRLPDPQ 942

Query: 1040 LSGTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPH 1099
              G VFLS+    KP    +A+  + +GF +V+T GTA  +   G+ V+ + K+ EGRP+
Sbjct: 943  AGGKVFLSVKQSDKPDAVEVARQLVAMGFGVVATRGTAAAIAEAGVEVQVINKVTEGRPN 1002

Query: 1100 AGDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKS 1159
              DM+ + +I +++ T         D   +R   LA +V   TT+SGALA  E ++ L+ 
Sbjct: 1003 IVDMLKSNEIVLVINTVEERRNAITDSRAIRTSALAARVTTYTTISGALAAVEGMKQLQK 1062

Query: 1160 NTVTMTALQDF 1170
              + +  LQ F
Sbjct: 1063 --IAVYPLQSF 1071


>gi|406039656|ref|ZP_11047011.1| carbamoyl-phosphate synthase large subunit [Acinetobacter ursingii
            DSM 16037 = CIP 107286]
          Length = 1077

 Score = 1273 bits (3294), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 628/1074 (58%), Positives = 798/1074 (74%), Gaps = 24/1074 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILI+GAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIKSILIIGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPSMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+T + V Q++EKERPDA+LPTMGGQTALN A+AL E+G LEKY VELIGA  DA
Sbjct: 63   ATYIEPITWQTVAQIIEKERPDAVLPTMGGQTALNCALALDENGVLEKYNVELIGASKDA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I+KAEDR LF  AM+ IG++ P + I   + E + I +  G FP+IIRP+FT+GG+GGGI
Sbjct: 123  IEKAEDRKLFDIAMRKIGLECPKAAIAENMQEALEIQSRFG-FPVIIRPSFTMGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEF  IC+ G   S T Q+L+++SL+GWKEYE+EV+RD  DN +I+C+IEN DPMG
Sbjct: 182  AYNREEFLEICERGFDLSPTHQLLIDESLIGWKEYEMEVVRDKNDNCIIVCAIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ +R+ SIA++REIGVE GGSNVQF +NP DG ++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQIMRNASIAVLREIGVETGGSNVQFGINPQDGRMVVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT   TPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKIAAKLAVGYTLDELKNDITGGTTPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            F FEKFP +EP+LTTQMKSVGE MA+GR FQES QKALR LE G SG+        +   
Sbjct: 362  FNFEKFPQAEPVLTTQMKSVGEVMAIGRNFQESVQKALRGLEVGVSGFDEKIEIGTEGAR 421

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
            E++++ L VP P+R+  +  A + G  +D++   + ID+WFL Q +++I  E+ + T   
Sbjct: 422  EKIQHELNVPGPERIWYVADAFRHGFSLDDVFNATKIDRWFLIQIQDIIKTEEQVKTLGF 481

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
             ++  D+    KR+G SD +IA     ++K+ R++R +LGV P YKRVDTCAAEFE++T 
Sbjct: 482  GDLNADNIRAFKRKGLSDLRIADLMGISQKQFRKQRWNLGVYPVYKRVDTCAAEFESSTA 541

Query: 627  YMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSN 686
            YMYS+YD ECE+ P+ + K++++GGGPNRIGQGIEFDYCC H + +++  GYETIM+N N
Sbjct: 542  YMYSTYDEECEANPSNRDKIMVIGGGPNRIGQGIEFDYCCVHAALAMREDGYETIMVNCN 601

Query: 687  PETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHR 746
            PETVSTDYDTSDRLYFEP+T+EDVL ++  E+P+G+IVQ+GGQTPLKL+    + L+E  
Sbjct: 602  PETVSTDYDTSDRLYFEPVTLEDVLEIVRTEKPKGVIVQYGGQTPLKLA----RALEEAG 657

Query: 747  LPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEIG 806
             P         I GTSPD+ID AEDRERF  +I+ L + QP   I KS  + +A A ++G
Sbjct: 658  TP---------IIGTSPDAIDRAEDRERFQQMIQRLQLRQPNNSIVKSAEEGMAEASKVG 708

Query: 807  YPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALAD 866
            YP+VVRPSYVLGGRAMEIVY DE L  YL +AV+   E PVL+D +L DA E+DVD ++D
Sbjct: 709  YPLVVRPSYVLGGRAMEIVYNDEELKRYLRDAVQASNEAPVLLDHFLDDATEVDVDCVSD 768

Query: 867  SCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNC 926
               +VVIGGIM+HIEQAG+HSGDSAC IP  ++S +  + +   TI +AK L V GLMN 
Sbjct: 769  G-KDVVIGGIMQHIEQAGIHSGDSACSIPPYSLSDTIQNEMRRQTIAMAKELGVVGLMNV 827

Query: 927  QYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPKH 986
            Q+A+    DVY+LE NPRASRTVPFVSK IG  LAK AA  M+G++L   GFTKE+IP  
Sbjct: 828  QFAV-KGDDVYVLEVNPRASRTVPFVSKCIGESLAKVAARCMAGQTLASQGFTKEIIPTR 886

Query: 987  VSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGT--- 1043
             +VKEAV PF KFQG D +LGPEM+STGEVMG+  +F  AF KA + + ++LP   T   
Sbjct: 887  FAVKEAVFPFAKFQGVDPMLGPEMKSTGEVMGVGKTFGEAFYKAVLGSNERLPGLPTEGE 946

Query: 1044 ---VFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHA 1100
                FLS+ +  K ++  IAK  +D GFK+++T GT   L+  G+A ERV K+ EGRPH 
Sbjct: 947  IKHAFLSVRESDKKYIADIAKKLVDYGFKLLATGGTYQVLKNAGLACERVNKVTEGRPHV 1006

Query: 1101 GDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAI 1154
             D + NG+I ++V T+ G    Q D   +RR  L  KV   TT++GA A  +A 
Sbjct: 1007 VDRLKNGEIHLIVNTTEGKQA-QYDSAMIRRAALQGKVYYTTTINGAEAVCQAF 1059


>gi|408373092|ref|ZP_11170790.1| carbamoyl phosphate synthase large subunit [Alcanivorax hongdengensis
            A-11-3]
 gi|407766930|gb|EKF75369.1| carbamoyl phosphate synthase large subunit [Alcanivorax hongdengensis
            A-11-3]
          Length = 1072

 Score = 1273 bits (3294), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 625/1068 (58%), Positives = 798/1068 (74%), Gaps = 18/1068 (1%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILI+GAGPIVIGQACEFDYSG QACKAL+EEG+ VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIKSILIIGAGPIVIGQACEFDYSGAQACKALREEGFRVILVNSNPATIMTDPAMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+T E V +++EKERPDALLPTMGGQTALN A+ L  +G LEK+GVE+IGA  DA
Sbjct: 63   ATYIEPITWETVAKIIEKERPDALLPTMGGQTALNCALDLDHNGVLEKFGVEMIGATEDA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  F QAMK IG++ P S I + ++E  +   E+G FP IIRP+FT+GG+GGG+
Sbjct: 123  IDKAEDRSRFDQAMKAIGLECPRSAIAHNMEEANAALEELG-FPCIIRPSFTMGGSGGGV 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEFE IC+ GL  S T+++L+++SLLGWKEYE+EV+RD  DN +I+CSIEN DPMG
Sbjct: 182  AYNREEFEEICQRGLDLSPTNELLIDESLLGWKEYEMEVVRDKKDNCIIVCSIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKE+Q +RD S+A++REIGVE GGSNVQF +NP +G ++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEFQIMRDASLAVLREIGVETGGSNVQFGLNPDNGRMVVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITK-KTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ N+IT  KTPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGYTLDELQNEITGGKTPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            F FEKF  ++P+LTTQMKSVGE MA+GR FQES QKALR LE    G+            
Sbjct: 362  FNFEKFVEADPVLTTQMKSVGEVMAIGRNFQESMQKALRGLETESIGFDPKVDPSAPDAR 421

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
            EQ+   L  P P+R+  +  A + GM VDE+  ++ ID WFL Q ++LI  EQ +   + 
Sbjct: 422  EQVAQMLATPGPERIWVVGDAFRVGMTVDEVFNITKIDHWFLVQIEDLIRTEQQVAESTF 481

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
            S++T+D  Y +KR+GFSD ++A      E +VR KR  LGV+P YKRVDTCAAEF  +T 
Sbjct: 482  SDLTRDSLYALKRKGFSDARLALLLGVKESDVRGKREELGVMPIYKRVDTCAAEFATDTA 541

Query: 627  YMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSN 686
            YMYSSYD ECE+ P+ + K++++GGGPNRIGQGIEFDYCC H +F+++  GYETIM+N N
Sbjct: 542  YMYSSYDEECEANPSDRDKIMVIGGGPNRIGQGIEFDYCCVHAAFAMKEDGYETIMVNCN 601

Query: 687  PETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHR 746
            PETVSTDYDTSDRL+FEP+T+EDVL+++  E+P+G+IVQ+GGQTPLKL+          R
Sbjct: 602  PETVSTDYDTSDRLFFEPVTLEDVLSIVAKEKPKGVIVQYGGQTPLKLA----------R 651

Query: 747  LPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEIG 806
               A+G   V I GTSPD+ID AEDRERF  ++ +L ++QP    A+S  D + +A+EIG
Sbjct: 652  ALQAAG---VPIIGTSPDAIDEAEDRERFQQMVNKLGLKQPPNRTARSLEDGVRLAEEIG 708

Query: 807  YPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALAD 866
            YP+VVRPSYVLGGRAMEIVY +  L  Y+ NAV V  + PVL+D++L DAIE+DVDA+ D
Sbjct: 709  YPLVVRPSYVLGGRAMEIVYNEAELRNYMNNAVSVSNDSPVLLDRFLDDAIEVDVDAVCD 768

Query: 867  SCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNC 926
               +VVIGGIM+HIEQAGVHSGDSAC +P  ++S    D +      +A  L V GLMN 
Sbjct: 769  GT-DVVIGGIMQHIEQAGVHSGDSACSLPPYSLSEEVQDVMRQQAADMALELGVVGLMNV 827

Query: 927  QYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPKH 986
            Q+A+  SG+VY+LE NPRASRTVP+VSK IG  LAK AA  M+G SL + GFT+E+ P+H
Sbjct: 828  QFAV-KSGEVYVLEVNPRASRTVPYVSKCIGTSLAKVAARCMAGTSLKEQGFTQEIKPQH 886

Query: 987  VSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVFL 1046
              VKEAV PF KF   D +LGPEM+STGEVMG+  +F  AF KA + AG+KLP  GT F+
Sbjct: 887  YFVKEAVFPFAKFPKVDPILGPEMKSTGEVMGVGATFAEAFGKASLGAGEKLPAKGTAFI 946

Query: 1047 SLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVAN 1106
            S+ ++ KP    +A+  ++ GF +V+T GTA  +   G+ V+ V K+ EGRPH  DM+ N
Sbjct: 947  SVREVDKPAAVDVARMLIERGFNLVATQGTAKVIAAAGLDVKVVNKVLEGRPHIVDMIKN 1006

Query: 1107 GQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAI 1154
             ++ ++V T+ G    + D   +RR  L +KV   TT++ A A  +A+
Sbjct: 1007 DEVALIVNTTEGKQAIR-DSFTIRRSALQHKVFYTTTITAAHAVCQAL 1053


>gi|242279639|ref|YP_002991768.1| carbamoyl-phosphate synthase large subunit [Desulfovibrio salexigens
            DSM 2638]
 gi|242122533|gb|ACS80229.1| carbamoyl-phosphate synthase, large subunit [Desulfovibrio salexigens
            DSM 2638]
          Length = 1077

 Score = 1273 bits (3294), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 639/1093 (58%), Positives = 809/1093 (74%), Gaps = 25/1093 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++KI+++G+GPIVIGQACEFDYSGTQA KALKEEGYEVIL+NSNPATIMTDP LAD
Sbjct: 3    KRTDIKKIMLIGSGPIVIGQACEFDYSGTQALKALKEEGYEVILVNSNPATIMTDPVLAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
            RTYI P+ P  + +++EKERPDALLPT+GGQTALN A+A+AE G L+K+GVELIGA +D 
Sbjct: 63   RTYIEPIEPGTIAKIIEKERPDALLPTLGGQTALNTALAVAEMGVLDKFGVELIGASVDV 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I+KAE R+LF+ AM+ IG+K P S I   +D+      EI  FP+IIRPAFTLGGTGGG+
Sbjct: 123  IEKAESRELFRAAMEKIGLKVPTSRIARNIDDVRRCGKEIS-FPIIIRPAFTLGGTGGGV 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN E+ E I   G++ASL ++V++E+S+LGWKEYELEVMRD  DN VIICSIEN+DPMG
Sbjct: 182  AYNMEDLEDIAMQGISASLQNEVMLEESILGWKEYELEVMRDRKDNCVIICSIENIDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTD EYQ LRD S+AI+REIGVE GGSNVQFA+NP +GE+ +IEMN
Sbjct: 242  VHTGDSITVAPAQTLTDVEYQMLRDASLAIMREIGVETGGSNVQFAINPENGELAIIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRF 447
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD+IPNDIT++T ASFEP+IDY V KIPRF
Sbjct: 302  PRVSRSSALASKATGFPIAKIAAKLAVGYTLDEIPNDITRETMASFEPTIDYCVIKIPRF 361

Query: 448  AFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDWE 507
             FEKFPGSE  LTT MKSVGE MA+GRTF+E  QK LRSLE G  G+G    +  D D E
Sbjct: 362  TFEKFPGSEDYLTTAMKSVGETMAIGRTFKECLQKGLRSLEVGMPGFG-KVFEPSDIDRE 420

Query: 508  QLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV- 566
            +L   +R PN  RM  +  A   GM ++EI +++ ID W+L QF++L+  E+ L   S+ 
Sbjct: 421  KLIGLIRKPNSKRMFYLREAFLAGMTLEEIFDITKIDPWYLHQFEDLVTFEKELRQFSLE 480

Query: 567  SNMTKDD------FYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAE 620
            + +   D      F + K  G+SD Q+A   + TE+ VR  R  LG++P+Y  VDTCAAE
Sbjct: 481  TGLYSGDERVPVMFKKAKEYGYSDPQLATMWRETEENVRNFRKKLGLVPTYYLVDTCAAE 540

Query: 621  FEANTPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYET 680
            FEA TPY YS+Y+   E+    ++KV+ILGGGPNRIGQGIEFDYCCCH++F+L+  G ++
Sbjct: 541  FEAYTPYFYSTYESGQEAESMPERKVMILGGGPNRIGQGIEFDYCCCHSAFALEDMGVKS 600

Query: 681  IMMNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQ 740
            IM+NSNPETVSTDYDTSDRLYFEPLT EDVLN+I+ E+PEG+IVQFGGQTPL L++P+ +
Sbjct: 601  IMVNSNPETVSTDYDTSDRLYFEPLTYEDVLNIIEFEKPEGVIVQFGGQTPLNLAIPLLK 660

Query: 741  YLDEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALA 800
                      +G   V I GTSPD+ID AEDRERF A++K+L ++QP  G A S  DA A
Sbjct: 661  ----------AG---VNILGTSPDAIDRAEDRERFQALLKKLDLKQPPNGTAMSLEDAKA 707

Query: 801  IAKEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEID 860
            IA+ + YP+V+RPSYVLGGR M+IVY+DE   +Y   A  V PE P+LIDK+L +A+E+D
Sbjct: 708  IAERLDYPLVLRPSYVLGGRGMDIVYSDEEFDSYFREAAVVSPEHPILIDKFLENAVEVD 767

Query: 861  VDALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNV 920
            VDALAD      + G+MEHIE+AG+HSGDSAC++P  T+S   +  I   T+ LA+ L V
Sbjct: 768  VDALADG-EQTYVAGVMEHIEEAGIHSGDSACVLPPHTLSDEIVKEIERQTVALAEELEV 826

Query: 921  CGLMNCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTK 980
             GLMN Q+A+   GD+Y++E NPRASRTVPFVSKA G  LAK A  VM G+ L DL    
Sbjct: 827  VGLMNIQFAV-KDGDIYIIEVNPRASRTVPFVSKATGIQLAKMATKVMLGEKLKDLDPWA 885

Query: 981  EVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPL 1040
                   SVKEAV PF +F   DV+LGPEMRSTGEVMG+D +  +AF KAQ+ AG KLP+
Sbjct: 886  MRKEGFYSVKEAVFPFNRFPNVDVMLGPEMRSTGEVMGMDYTPGLAFMKAQLGAGIKLPM 945

Query: 1041 SGTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHA 1100
             GTVF+S+ D  K  +   A+ F  +GFKI++T GTA++L   GIA +++LK++EGRPH 
Sbjct: 946  EGTVFISVKDRDKEAILPTARNFEKLGFKILATGGTANYLFENGIATKKILKVNEGRPHV 1005

Query: 1101 GDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSN 1160
             D + NG I +++ T SG      D  ++R+  L Y +   TTV+GA A + AI   +  
Sbjct: 1006 VDYIKNGDIDLLINTPSGKQTVS-DSKEIRQTTLLYGLAYTTTVAGAHAMSLAIEEQRGK 1064

Query: 1161 TVTMTALQDFFDV 1173
             + +  LQ + D+
Sbjct: 1065 GLDVQCLQHYHDM 1077


>gi|254361688|ref|ZP_04977825.1| carbamoyl-phosphate synthase (glutamine-hydrolyzing) [Mannheimia
            haemolytica PHL213]
 gi|261491742|ref|ZP_05988322.1| carbamoyl phosphate synthase large subunit [Mannheimia haemolytica
            serotype A2 str. BOVINE]
 gi|261495508|ref|ZP_05991955.1| carbamoyl phosphate synthase large subunit [Mannheimia haemolytica
            serotype A2 str. OVINE]
 gi|452744429|ref|ZP_21944274.1| carbamoyl phosphate synthase large subunit [Mannheimia haemolytica
            serotype 6 str. H23]
 gi|153093210|gb|EDN74221.1| carbamoyl-phosphate synthase (glutamine-hydrolyzing) [Mannheimia
            haemolytica PHL213]
 gi|261308842|gb|EEY10098.1| carbamoyl phosphate synthase large subunit [Mannheimia haemolytica
            serotype A2 str. OVINE]
 gi|261312581|gb|EEY13704.1| carbamoyl phosphate synthase large subunit [Mannheimia haemolytica
            serotype A2 str. BOVINE]
 gi|452087543|gb|EME03921.1| carbamoyl phosphate synthase large subunit [Mannheimia haemolytica
            serotype 6 str. H23]
          Length = 1068

 Score = 1273 bits (3293), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 625/1072 (58%), Positives = 805/1072 (75%), Gaps = 22/1072 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD+  ILI+GAGPIVIGQACEFDYSG QACKAL+EEGY+V+L+NSNPATIMTDP +AD
Sbjct: 3    KRTDINTILIIGAGPIVIGQACEFDYSGAQACKALREEGYKVVLVNSNPATIMTDPNMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  + VE+++EKERPDA+LPTMGGQTALN A+ L+++G L+KY VELIGA  DA
Sbjct: 63   VTYIEPIEWKTVEKIIEKERPDAILPTMGGQTALNCALDLSKNGVLKKYNVELIGATEDA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  FK+AM  IG+ TP S + ++ +E ++   ++G FP +IRP+FT+GG+GGGI
Sbjct: 123  IDKAEDRGRFKEAMTKIGLNTPKSFVCHSFEEALAAQEQVG-FPTLIRPSFTMGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN++EF AIC+ G  AS T ++L+E+S+LGWKEYE+EV+RD ADN +I+CSIEN DPMG
Sbjct: 182  AYNRDEFIAICERGFEASPTHELLIEQSVLGWKEYEMEVVRDRADNCIIVCSIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGV+ GGSNVQFA+NP +GE++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQIMRNASLAVLREIGVDTGGSNVQFAINPANGEMIVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKK-TPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+L+++ NDIT    PASFEP++DYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGYTLNELRNDITGGLIPASFEPTLDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            FAFEKF  ++  LTTQMKSVGE MA+GRTFQES QKALR LE G  G+       L  + 
Sbjct: 362  FAFEKFANADDRLTTQMKSVGEVMAMGRTFQESLQKALRGLETGICGFNL-----LSEEP 416

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
            E+++  L  P P+R+  +  A   G  ++E+H  S ID WFL Q ++L+  E  L  +  
Sbjct: 417  EKIRRELANPGPNRILYVADAFGAGFSLEEVHHYSKIDPWFLVQIQDLVLEELALEKKQF 476

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
            S++  ++   +KR+GFSDK+IA  TK +EK VR+ R +  ++P YKRVDTCAAEF ++T 
Sbjct: 477  SDLDANEIRRLKRKGFSDKRIAQLTKVSEKMVRDYRHTYAILPVYKRVDTCAAEFASDTA 536

Query: 627  YMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSN 686
            Y+YS+Y+ ECE+ P+ +KKV+ILGGGPNRIGQGIEFDYCC H S +L+ AGYETIM+N N
Sbjct: 537  YLYSTYEEECEAKPSDRKKVMILGGGPNRIGQGIEFDYCCVHASLALREAGYETIMVNCN 596

Query: 687  PETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHR 746
            PETVSTD+DTSDRLYFEPLT+EDVL ++ +E P G+IV +GGQTPLKL+           
Sbjct: 597  PETVSTDFDTSDRLYFEPLTLEDVLEIVRVENPWGVIVHYGGQTPLKLA----------- 645

Query: 747  LPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEIG 806
              +A  D  V I GTS DSIDAAEDRERF  I+  L ++QP    A++  +A+A+A E+G
Sbjct: 646  --NALSDAGVNIIGTSADSIDAAEDRERFQQILNTLGLKQPANRTARNALEAVALANEVG 703

Query: 807  YPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALAD 866
            YP+VVRPSYVLGGRAM+IVY DE L  Y+  AV V  + P+L+D +L++AIE+DVD + D
Sbjct: 704  YPLVVRPSYVLGGRAMQIVYNDEELNRYMREAVSVSNDSPILLDHFLNNAIEVDVDCICD 763

Query: 867  SCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNC 926
               NV+IGGIM+H+EQAG+HSGDSAC +P  ++S   LD I   T  +A  L V GLMN 
Sbjct: 764  G-ENVLIGGIMQHVEQAGIHSGDSACSLPAYSLSGHVLDEIRKQTNAMAFALGVKGLMNV 822

Query: 927  QYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPKH 986
            Q+A+     VY+LE NPRASRTVPFVSKA G PLAK AA VM+G++L DL   +E+IP  
Sbjct: 823  QFAVQNE-VVYVLEVNPRASRTVPFVSKATGRPLAKIAARVMAGETLADLNALEEIIPSK 881

Query: 987  VSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVFL 1046
              VKEAV PF KF G D +LGPEMRSTGEVMGI  +F  AF KAQ+ AG+++P  G VF+
Sbjct: 882  FFVKEAVFPFIKFPGVDTILGPEMRSTGEVMGIGNTFAEAFFKAQLGAGERIPKVGKVFM 941

Query: 1047 SLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVAN 1106
            S+ +  KP L  IAK F + G+ + +T GTA+FL   GIAV+ V K+ EGRPH  D + N
Sbjct: 942  SVIEEHKPALIYIAKRFQEQGYGLCATFGTANFLRQHGIAVQTVNKVREGRPHIVDAIKN 1001

Query: 1107 GQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLK 1158
            G+I +++ T SG+     D   +RR  L  +VP+ TT++GA A +  ++ + 
Sbjct: 1002 GEIALVINTVSGEPEVIADSHSIRRTALQQRVPIYTTLAGADAISYGVKHIN 1053


>gi|120556265|ref|YP_960616.1| carbamoyl-phosphate synthase large subunit [Marinobacter aquaeolei
            VT8]
 gi|120326114|gb|ABM20429.1| carbamoyl-phosphate synthase large subunit [Marinobacter aquaeolei
            VT8]
          Length = 1072

 Score = 1272 bits (3292), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 628/1078 (58%), Positives = 810/1078 (75%), Gaps = 21/1078 (1%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILILGAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPAMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+T + VE+++EKE+PDALLPTMGGQTALN A+ L + G LEK+GVE+IGA  D 
Sbjct: 63   ATYIEPITWKTVEKIIEKEKPDALLPTMGGQTALNCALDLEKHGVLEKHGVEMIGANADT 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDRD F +AMK IG++ P + I +++DE   I+ +IG FP IIRP+FT+GG+GGGI
Sbjct: 123  IDKAEDRDRFDKAMKKIGLECPRAAIAHSMDEAWKISEDIG-FPCIIRPSFTMGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYNK+EFE IC  GL  S T+++L+++SL+GWKEYE+EV+RD  DN +I+C+IEN D MG
Sbjct: 182  AYNKDEFEEICTRGLDLSPTNELLIDESLIGWKEYEMEVVRDKNDNCIIVCAIENFDAMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGVE GGSNVQF +NP  G ++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQIMRNASLAVLREIGVETGGSNVQFGINPDTGRMVVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKK-TPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ N+IT   TPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGYTLDELQNEITGGVTPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWD- 505
            F FEKFP ++  LTTQMKSVGE MA+GRTFQES QKALR LE G  G+    ++ELD + 
Sbjct: 362  FTFEKFPQADARLTTQMKSVGEVMAIGRTFQESVQKALRGLEVGSEGFD-EKLEELDSEN 420

Query: 506  -WEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQ 564
              E L   L VP  +R+  I  A + GM VDE+   + +D W+L Q ++++  EQ L + 
Sbjct: 421  SRETLTRELNVPGAERIWYIGDAFRAGMTVDEVFRHTKVDPWYLVQIEDIVREEQALKSA 480

Query: 565  SVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEAN 624
              +++ K   + +KR+GFSD ++A     +E  +R+ R  LG+ P YKRVDTCAAEF ++
Sbjct: 481  GKADIDKATLFRLKRKGFSDARLAKLLGISEVSLRKLRHDLGIRPVYKRVDTCAAEFASD 540

Query: 625  TPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMN 684
            T YMYS+Y+ ECE+ P+ ++K++++GGGPNRIGQGIEFDYCC H + +++  GYETIM+N
Sbjct: 541  TAYMYSTYEEECEAEPSDREKIVVIGGGPNRIGQGIEFDYCCVHAALAMREDGYETIMIN 600

Query: 685  SNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDE 744
             NPETVSTDYDTSDRLYFEP+T+EDVL +I++E+P+G+IVQ+GGQTPLKL+         
Sbjct: 601  CNPETVSTDYDTSDRLYFEPITLEDVLEIINVEKPKGVIVQYGGQTPLKLA--------- 651

Query: 745  HRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKE 804
             R   A+G   V I GTSPD+ID AEDRERF  +I+ L ++QP+    +S  + +  A+E
Sbjct: 652  -RGLEAAG---VPIIGTSPDAIDRAEDRERFQQMIQRLGLKQPENATVRSHEEGIVAARE 707

Query: 805  IGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDAL 864
            IGYP+VVRPSYVLGGRAMEIVY +  LV Y+ NAV V  + PVL+D +L+ AIE+D+DA+
Sbjct: 708  IGYPLVVRPSYVLGGRAMEIVYDETELVRYMRNAVLVSNDSPVLLDHFLNAAIEVDIDAI 767

Query: 865  ADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLM 924
            +D   +VVIGGIM+HIEQAGVHSGDSAC +P  ++S    D +     K+A  L+V GLM
Sbjct: 768  SDGT-DVVIGGIMQHIEQAGVHSGDSACSLPPYSLSRQVQDEMREAVKKMAIELDVIGLM 826

Query: 925  NCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIP 984
            N Q A    G++Y++E NPRASRTVPFVSKAIG  LA  AA VMSGKSL +L FT+E++P
Sbjct: 827  NVQLAY-QDGEIYVIEVNPRASRTVPFVSKAIGVSLAAVAARVMSGKSLKELNFTQEIVP 885

Query: 985  KHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTV 1044
             + +VKE+V PF KF   D +LGPEM+STGEVMG+  SF  AFAKA +A G+ LP  G  
Sbjct: 886  TYYAVKESVFPFNKFPAVDPILGPEMKSTGEVMGLGDSFDEAFAKAALAVGECLPAQGVA 945

Query: 1045 FLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMV 1104
            F+S+ D+ KP    +A+  +D GF+I++T+GTA  LE +GIAVERV K+ EGRPH  D +
Sbjct: 946  FMSVRDVDKPGAASVARDLVDAGFRIIATTGTAKALEAEGIAVERVNKVREGRPHIVDAI 1005

Query: 1105 ANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTV 1162
             NGQ+Q+++ T+ G      D  ++R+  L  KV   TT++G  A   AI+     TV
Sbjct: 1006 KNGQVQLIINTTEGRKAIS-DSAQIRQSALQTKVTYTTTLAGGEAFCRAIKFGPERTV 1062


>gi|317152916|ref|YP_004120964.1| carbamoyl-phosphate synthase large subunit [Desulfovibrio aespoeensis
            Aspo-2]
 gi|316943167|gb|ADU62218.1| carbamoyl-phosphate synthase, large subunit [Desulfovibrio
            aespoeensis Aspo-2]
          Length = 1078

 Score = 1272 bits (3292), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 633/1092 (57%), Positives = 809/1092 (74%), Gaps = 26/1092 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++KI+++G+GPIVIGQACEFDYSGTQA KALKEEGYEV+LINSNPA+IMTDP LAD
Sbjct: 3    KRTDIKKIMLIGSGPIVIGQACEFDYSGTQALKALKEEGYEVVLINSNPASIMTDPELAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
            RTYI P+ PE V +++EKERPDALLPT+GGQT LN A+A+AE G L+++ VELIGA + A
Sbjct: 63   RTYIEPIEPETVARIIEKERPDALLPTLGGQTGLNTALAVAEMGVLDRFNVELIGANIAA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAE R+ F+ AM+ IG+  P SGI   +++ +    +I  FP+I+RPA+TLGG+GGG+
Sbjct: 123  INKAESREEFRAAMENIGLSVPESGICRNMED-VRRWGQIIAFPIIVRPAYTLGGSGGGV 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN EE E IC  GLA S+  ++++E+S+LGWKEYELEVMRD  DN VIICSIEN+DPMG
Sbjct: 182  AYNMEELEEICANGLALSMKHEIMLERSILGWKEYELEVMRDRNDNCVIICSIENLDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDS+TVAPAQTLTD EYQ +R+ S+AI+REIGVE GGSNVQFA+NP +GE++VIEMN
Sbjct: 242  VHTGDSVTVAPAQTLTDDEYQMMRNASLAIMREIGVETGGSNVQFAINPENGEMIVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRF 447
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD+IPNDIT++T ASFEP+IDY V KIPRF
Sbjct: 302  PRVSRSSALASKATGFPIAKIAAKLAVGYTLDEIPNDITRETMASFEPAIDYCVVKIPRF 361

Query: 448  AFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDWE 507
             FEKFPG+E  LTT MKSVGE MA+GRTF+E+ QK LRSLE G +G G    +  + D  
Sbjct: 362  TFEKFPGTEDYLTTAMKSVGETMAIGRTFKEALQKGLRSLETGHTGLG-KRFETCEIDRN 420

Query: 508  QLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLL----- 562
            ++   LR PN  R+ A+  A++ GM V+EI E + ID WFL QF++++ +E+ L+     
Sbjct: 421  EILRLLRRPNSQRIYALRNALRCGMSVEEIFEATHIDPWFLRQFEDILVMERTLIEFGKK 480

Query: 563  --TQSVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAE 620
                + +    +     K  G+SD Q+A   ++ E  +R  R  LG+IP+Y  VDTCAAE
Sbjct: 481  EGVDAAAKGMAEMLRTAKEYGYSDAQLAAMWRTGEDAIRAMRKELGIIPTYYLVDTCAAE 540

Query: 621  FEANTPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYET 680
            FEA+TPY YS+Y+   E+   + KK++ILGGGPNRIGQGIEFDYCCCH+SF+L+  G ++
Sbjct: 541  FEAHTPYYYSTYETGQENVRDEVKKIVILGGGPNRIGQGIEFDYCCCHSSFTLKEMGVQS 600

Query: 681  IMMNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQ 740
            IM+NSNPETVSTDYDTSD+LYFEPLT EDV+N+ID E+P+G+IVQFGGQTPL L+L    
Sbjct: 601  IMVNSNPETVSTDYDTSDKLYFEPLTFEDVMNIIDFEQPDGVIVQFGGQTPLNLAL---- 656

Query: 741  YLDEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALA 800
                 RL  A     V + GTSPD+ID AEDRERF   + +L ++QP  G A S   A  
Sbjct: 657  -----RLMRAG----VPLIGTSPDAIDRAEDRERFKQFLNKLHLKQPPNGTAMSMTAAKE 707

Query: 801  IAKEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEID 860
            IA+ +G+P+V+RPSYVLGGR M+IVY+ +    Y  ++  V PE P LIDK+L  AIE+D
Sbjct: 708  IAQGLGFPLVLRPSYVLGGRGMDIVYSMDEFEAYFRDSARVSPEHPTLIDKFLEYAIEVD 767

Query: 861  VDALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNV 920
            VDALAD   +V IGG+MEHIE+AG+HSGDSA ++P  ++SS  +  I   T+ +A+ L V
Sbjct: 768  VDALADG-EDVYIGGVMEHIEEAGIHSGDSASVLPPYSLSSEMIREIERQTVAMARELGV 826

Query: 921  CGLMNCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTK 980
             GLMN Q+AI   G+V+++E NPRASRTVPFVSKA G PLAK A  VM G+ L DL    
Sbjct: 827  VGLMNVQFAI-KDGEVFIIEVNPRASRTVPFVSKATGVPLAKLATRVMLGEKLKDLKPWA 885

Query: 981  EVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPL 1040
                 HVSVKE+V PF +F   DVLLGPEMRSTGEVMGID SF +A+ KAQ+AAGQKLP 
Sbjct: 886  TRKKGHVSVKESVFPFNRFPNVDVLLGPEMRSTGEVMGIDPSFGLAYMKAQLAAGQKLPT 945

Query: 1041 SGTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEG-RPH 1099
            SGTVF+S+ND  K  L   AK F D+GF++++T GTA +   KG+ V +V K+HEG RPH
Sbjct: 946  SGTVFISVNDWDKAKLVLAAKDFADMGFRVMATGGTADYFIEKGVPVTKVNKVHEGQRPH 1005

Query: 1100 AGDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKS 1159
              D + NG+I +++ T SG      D   +R+  L Y +P  TTVSGA A A+AI  L+ 
Sbjct: 1006 VVDHIKNGEIDLVINTPSGKKTVG-DAKIIRQNTLLYNIPYTTTVSGARAIAQAILELRQ 1064

Query: 1160 NTVTMTALQDFF 1171
              + + +LQ ++
Sbjct: 1065 TGLQVQSLQKYY 1076


>gi|288940453|ref|YP_003442693.1| carbamoyl-phosphate synthase large subunit [Allochromatium vinosum
            DSM 180]
 gi|288895825|gb|ADC61661.1| carbamoyl-phosphate synthase, large subunit [Allochromatium vinosum
            DSM 180]
          Length = 1069

 Score = 1272 bits (3291), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 643/1089 (59%), Positives = 807/1089 (74%), Gaps = 27/1089 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD+  ILI+G+GPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIHSILIIGSGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+T   +  ++E+ERPDALLPTMGGQTALN A+ L   G LEK+GVELIGA  +A
Sbjct: 63   ATYIEPVTWRALASIIEQERPDALLPTMGGQTALNCALDLVREGVLEKFGVELIGASREA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDRDLF+QAM+ IG+  P S I ++L+E I +   IG FP IIRP+FT+GG+GGGI
Sbjct: 123  IDKAEDRDLFRQAMRKIGLDMPRSAIAHSLEEAIQVQAPIG-FPTIIRPSFTMGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEFE IC+ GL  S T ++L+E+S+LGWKEYE+EV+RD ADN +IICSIEN+DPMG
Sbjct: 182  AYNQEEFEEICRRGLDLSPTKELLIEESVLGWKEYEMEVVRDHADNCIIICSIENLDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ +R+ SIA++REIGV+ GGSNVQFA+NP +G ++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQIMRNASIAVLREIGVDTGGSNVQFAINPENGRMIVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ N+IT   TPASFEP+IDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGYTLDELRNEITGGATPASFEPTIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKEL-DWD 505
            FAFEKFP ++  LTTQMKSVGE MA+GRTFQES QKALR LE     +G   + +L D D
Sbjct: 362  FAFEKFPLADARLTTQMKSVGEVMAIGRTFQESLQKALRGLE--IDRYGLDEIVDLNDPD 419

Query: 506  -WEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQ 564
              + ++  +R    +R+  +  A + GM +DEIHELS ID WFL Q ++LI  E      
Sbjct: 420  ALDTIRLEVRQTGAERLFYVAEAFRFGMSLDEIHELSRIDPWFLAQIEDLIRAESETRAA 479

Query: 565  SVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEAN 624
              + +T D    +KR+GF+D++IA    + E E+R  R  +G+ P YKRVDTCAAEF ++
Sbjct: 480  GRAGLTLDRLRALKRQGFADRRIARLVGAQESEIRALRHEMGLHPVYKRVDTCAAEFASS 539

Query: 625  TPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMN 684
            T YMYS+Y+ ECE+ PT ++K+++LGGGPNRIGQGIEFDYCC H +F+++  GYETIM+N
Sbjct: 540  TAYMYSTYEEECEAEPTDREKIMVLGGGPNRIGQGIEFDYCCVHAAFAMREDGYETIMVN 599

Query: 685  SNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDE 744
             NPETVSTDYDTSDRLYFEPLT+EDVL +++ E+P+G+IVQ+GGQTPLKL+         
Sbjct: 600  CNPETVSTDYDTSDRLYFEPLTLEDVLEIVEKEKPKGVIVQYGGQTPLKLA--------- 650

Query: 745  HRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKE 804
             R   A+G   V I GT+PDSID AEDRERF  +I+EL + QP    A+SE +A+  A  
Sbjct: 651  -RALEAAG---VPIIGTTPDSIDLAEDRERFQQLIQELGLRQPPNATARSEDEAVERAAA 706

Query: 805  IGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDAL 864
            IGYP+VVRPSYVLGGRAMEIVY +  L  Y+  AV V  E PVL+D++L DAIE+DVDA+
Sbjct: 707  IGYPLVVRPSYVLGGRAMEIVYDETDLKRYMREAVRVSNESPVLLDRFLDDAIEVDVDAI 766

Query: 865  ADSCGN-VVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGL 923
             D  GN V+IGGIMEHIEQAGVHSGDSAC +P  T+S +  D +    +K+A+ LNV GL
Sbjct: 767  CD--GNEVLIGGIMEHIEQAGVHSGDSACSLPPYTLSPAIQDRMREQMVKMARALNVVGL 824

Query: 924  MNCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVI 983
            MN Q+AI    ++++LE NPRASRTVPFVSKAIG PLAK AA  M+G+SL + G  +EV 
Sbjct: 825  MNAQFAI-KGDEIFILEVNPRASRTVPFVSKAIGVPLAKVAARCMAGRSLEEQGCRREVR 883

Query: 984  PKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPL-SG 1042
            PKH  VKEAV PF KF G D LLGPEM+STGEVMG+  +F  A+AKAQ  AG  LP   G
Sbjct: 884  PKHYFVKEAVFPFVKFPGVDTLLGPEMKSTGEVMGVGETFGEAYAKAQEGAGSLLPRKGG 943

Query: 1043 TVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGD 1102
               LS+ +  K  L  +A+  L+ GF +  T GTA  +   G+    V K+ EGRPH  D
Sbjct: 944  KALLSVREGDKARLIEVARDLLEFGFTLYGTHGTAAAVRAAGLPCTGVNKVAEGRPHIVD 1003

Query: 1103 MVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTV 1162
            M+ N +I  +V T+ G +    D   +RR  L YKVP  TT++GA A   A++ L  + +
Sbjct: 1004 MIKNNEIGFIVNTTEG-AKAIADSAAIRRAALQYKVPYTTTIAGAEATCMALKQL--DIL 1060

Query: 1163 TMTALQDFF 1171
            ++  LQD +
Sbjct: 1061 SVNRLQDLY 1069


>gi|405351364|ref|ZP_11022847.1| Carbamoyl-phosphate synthase large chain [Chondromyces apiculatus DSM
            436]
 gi|397093255|gb|EJJ23978.1| Carbamoyl-phosphate synthase large chain [Myxococcus sp. (contaminant
            ex DSM 436)]
          Length = 1084

 Score = 1271 bits (3290), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 625/1091 (57%), Positives = 807/1091 (73%), Gaps = 18/1091 (1%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD+RK+L++G+GPIVIGQA EFDYSGTQA KAL++EG EV+L+NSNPAT+MTDP  A 
Sbjct: 3    KRTDIRKVLVIGSGPIVIGQAVEFDYSGTQAIKALRDEGVEVVLLNSNPATVMTDPEFAH 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
            RTYI P+T E  E++L  ERPD+LLPTMGGQTALNLA ALAE G L+KYGV LIGA L+A
Sbjct: 63   RTYIEPITVEAAERILASERPDSLLPTMGGQTALNLAKALAEQGILDKYGVRLIGASLEA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR LFK AM+ IGV  P SG   TLD+ + +  +IG FP IIRP+FTLGGTGGGI
Sbjct: 123  INKAEDRQLFKAAMQKIGVALPKSGYATTLDQAMQLVEDIG-FPAIIRPSFTLGGTGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEFE IC++GL AS TS +LVE+S+LGWKEYELEV+RD ADNV+I+CSIEN+DPMG
Sbjct: 182  AYNREEFETICRSGLKASPTSTILVEESVLGWKEYELEVVRDTADNVIIVCSIENLDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTD+EYQR+R  S+AIIREIGV+ GGSN+QF ++P DG ++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDREYQRMRQASLAIIREIGVDTGGSNIQFGIHPKDGRMVVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRF 447
            PRVSRSSALASKATG+PIAK+AAKL++GY+LD++ NDIT+ TPASFEP++DYVV K+PRF
Sbjct: 302  PRVSRSSALASKATGYPIAKIAAKLALGYTLDELRNDITRDTPASFEPTLDYVVVKVPRF 361

Query: 448  AFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDWE 507
             FEKFP ++  LTT M+SVGE MA+GRTF E++ KALRS+E G  G     +     + E
Sbjct: 362  NFEKFPHADRTLTTSMRSVGEVMAIGRTFPEAYMKALRSMELGRVGLESPELPTEKEERE 421

Query: 508  Q-LKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
            + L+ +LR+P P+R   +  A ++G+ V+++H LS ID WFL   + L++  Q L     
Sbjct: 422  KVLREALRIPRPERPWFVAQAFREGLTVEDVHALSAIDPWFLRYIQMLVNEAQSLQEYGR 481

Query: 567  SNMTKDD-FYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANT 625
             +   DD   + K  GFSDK +       E+EVR  R S  + P +KRVDTCAAEFEA T
Sbjct: 482  LDQLPDDVLRQAKAHGFSDKYLGKLLGYPEEEVRAHRHSRNIRPVFKRVDTCAAEFEAYT 541

Query: 626  PYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNS 685
            PY+YS+Y+ E E+ PT ++KVLILG GP RIGQGIEFDY C H +F+L+ AGYET+M+N 
Sbjct: 542  PYLYSTYEEEDEAPPTDRQKVLILGSGPIRIGQGIEFDYACVHAAFALREAGYETVMVNC 601

Query: 686  NPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEH 745
            NPETVSTDYDTSDRLYFEPLT+EDVL V   E+P G IVQFGGQTPL++S+P    L++ 
Sbjct: 602  NPETVSTDYDTSDRLYFEPLTIEDVLEVSQREKPVGAIVQFGGQTPLRISVP----LEKA 657

Query: 746  RLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEI 805
             LP         I GT PD+ID AEDRERF+ +I++L ++QP+ G+A+S A+A  +A+ I
Sbjct: 658  GLP---------ILGTPPDAIDRAEDRERFSKLIEKLGLKQPENGVARSHAEAFKVAERI 708

Query: 806  GYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALA 865
            GYPV+VRPSYVLGGRAME VY   +L  Y+  AV   PE PVLID++L +AIE+D+D +A
Sbjct: 709  GYPVMVRPSYVLGGRAMETVYDVSSLERYMREAVSASPEHPVLIDRFLKEAIEVDLDLVA 768

Query: 866  DSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMN 925
            D  G V+IGG++EHI++AGVHSGD+A  +P  ++S   ++ +    I LA+ L V GLMN
Sbjct: 769  DRTGAVMIGGVLEHIQEAGVHSGDAAATLPPHSLSPDLVERMKDQAIALARELGVVGLMN 828

Query: 926  CQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPK 985
             Q+AI     +Y+LE NPRASRTVPF+SKA G  +AK AAL M GK+L +LG T+E   K
Sbjct: 829  VQFAI-QGKTIYILEVNPRASRTVPFISKATGVAMAKIAALCMVGKTLKELGATQEPEFK 887

Query: 986  HVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVF 1045
            HV+VKE+V PF +F G DV+LGPEM+STGEVMG+   +  AFAK+Q+AAG KLP SG VF
Sbjct: 888  HVAVKESVFPFARFAGVDVILGPEMKSTGEVMGLANDYASAFAKSQLAAGVKLPKSGKVF 947

Query: 1046 LSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVA 1105
            +S+ D  KP +  +A+   ++GF ++ T+GT  +L  KGI  + V K+ EGRP+  D + 
Sbjct: 948  ISVKDDDKPAVVDLARRLRNMGFTLIVTAGTHTYLATKGIEAQVVQKVKEGRPNIVDKIV 1007

Query: 1106 NGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTVTMT 1165
            +G+I +++ T+ G   +  D   +RR  L + VP  TTV  A     A+ SLK   + + 
Sbjct: 1008 DGEIVLVINTTFGKQ-EIADSFSIRRESLMHSVPYYTTVQAARMAVGALESLKRADLEVK 1066

Query: 1166 ALQDFFDVETA 1176
             LQ++  +  A
Sbjct: 1067 PLQEYLGINAA 1077


>gi|338534582|ref|YP_004667916.1| carbamoyl phosphate synthase large subunit [Myxococcus fulvus HW-1]
 gi|337260678|gb|AEI66838.1| carbamoyl phosphate synthase large subunit [Myxococcus fulvus HW-1]
          Length = 1083

 Score = 1271 bits (3290), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 625/1091 (57%), Positives = 806/1091 (73%), Gaps = 18/1091 (1%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD+RK+L++G+GPIVIGQA EFDYSGTQA KAL++EG EV+L+NSNPAT+MTDP  A 
Sbjct: 3    KRTDIRKVLVIGSGPIVIGQAVEFDYSGTQAIKALRDEGVEVVLLNSNPATVMTDPEFAH 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
            RTYI P+T E  E++L  ERPD+LLPTMGGQTALNLA ALAE G L+KYGV LIGA L+A
Sbjct: 63   RTYIEPITVEAAERILASERPDSLLPTMGGQTALNLAKALAEQGILDKYGVRLIGASLEA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR LFK AM+ IGV  P SG   TLD+ + +  EIG FP IIRP+FTLGGTGGGI
Sbjct: 123  INKAEDRQLFKAAMQKIGVALPKSGYATTLDQAMQLVEEIG-FPAIIRPSFTLGGTGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEFE IC++GL AS T+ +LVE+S+LGWKEYELEV+RD ADNV+I+CSIEN+DPMG
Sbjct: 182  AYNREEFETICRSGLKASPTTTILVEESVLGWKEYELEVVRDTADNVIIVCSIENLDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTD+EYQR+R  S+AIIREIGV+ GGSN+Q+ +NP DG ++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDREYQRMRQASLAIIREIGVDTGGSNIQYGINPKDGRMVVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRF 447
            PRVSRSSALASKATG+PIAK+AAKL++GY+LD++ NDIT+ TPASFEP++DYVV K+PRF
Sbjct: 302  PRVSRSSALASKATGYPIAKIAAKLALGYTLDELRNDITRDTPASFEPTLDYVVVKVPRF 361

Query: 448  AFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDWE 507
             FEKFP ++  LTT M+SVGE MA+GRTF E++ KALRS+E G  G     +     + E
Sbjct: 362  NFEKFPHADRTLTTSMRSVGEVMAIGRTFPEAYMKALRSMELGRVGLESPELPAEKEERE 421

Query: 508  Q-LKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
            + L+ +LR+P P+R   +  A ++G+ V+++H LS ID WFL   + L++  Q L     
Sbjct: 422  KVLREALRIPRPERPWYVAQAFREGLTVEDVHALSAIDPWFLRYIQMLVNEAQSLQEYGR 481

Query: 567  SNMTKDD-FYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANT 625
             +   D+   + K  GFSDK +       E+EVR  R +  + P +KRVDTCAAEFEA T
Sbjct: 482  LDQLPDEVLRQAKAHGFSDKYLGKLLGYPEEEVRAHRHARDIRPVFKRVDTCAAEFEAYT 541

Query: 626  PYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNS 685
            PY+YS+Y+ E E+ PT ++KVLILG GP RIGQGIEFDY C H +F+L+ AGYET+M+N 
Sbjct: 542  PYLYSTYEEEDEAPPTDRQKVLILGSGPIRIGQGIEFDYACVHAAFALREAGYETVMVNC 601

Query: 686  NPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEH 745
            NPETVSTDYDTSDRLYFEPLT+EDVL V   E+P G IVQFGGQTPL++S+P    L++ 
Sbjct: 602  NPETVSTDYDTSDRLYFEPLTIEDVLEVSQREKPVGAIVQFGGQTPLRISVP----LEKA 657

Query: 746  RLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEI 805
             LP         I GT PD+ID AEDRERF  +I++L ++QP+ G+A+S A+A  +A+ I
Sbjct: 658  GLP---------ILGTPPDAIDRAEDRERFATLIEKLGLKQPENGVARSHAEAFKVAERI 708

Query: 806  GYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALA 865
            GYPV+VRPSYVLGGRAME VY   +L  Y+  AV   PE PVLID++L DAIE+D+D +A
Sbjct: 709  GYPVMVRPSYVLGGRAMETVYDVSSLERYMREAVSASPEHPVLIDRFLKDAIEVDLDLVA 768

Query: 866  DSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMN 925
            D  G V+IGG++EHI++AGVHSGD+A  +P  ++S   ++ +    I LA+ L V GLMN
Sbjct: 769  DRTGAVMIGGVLEHIQEAGVHSGDAAATLPPHSLSPDLVERMKDQAIALARELGVVGLMN 828

Query: 926  CQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPK 985
             Q+AI     +Y+LE NPRASRTVPF+SKA G  +AK AAL M GK+L +LG T+E   K
Sbjct: 829  VQFAI-QGKTIYILEVNPRASRTVPFISKATGVAMAKIAALCMVGKTLKELGATQEPEFK 887

Query: 986  HVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVF 1045
            HV+VKE+V PF +F G DV+LGPEM+STGEVMG+   +  AFAK+Q+AAG KLP SG VF
Sbjct: 888  HVAVKESVFPFARFAGVDVILGPEMKSTGEVMGLANDYASAFAKSQLAAGVKLPKSGKVF 947

Query: 1046 LSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVA 1105
            +S+ D  KP +  +A+   ++G+ +V TSGT  +L  KGI  + V K+ EGRP+  D + 
Sbjct: 948  ISVKDDDKPAVVDLARRLRNMGYSLVVTSGTHAYLATKGIEAQVVQKVKEGRPNIVDKIL 1007

Query: 1106 NGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTVTMT 1165
            +G+I +++ T+ G   +  D   +RR  L + VP  TTV  A     A+ SLK   + + 
Sbjct: 1008 DGEIVLVINTTFGKQ-EIADSFSIRRESLMHSVPYYTTVQAARMAVGALESLKRTELEVK 1066

Query: 1166 ALQDFFDVETA 1176
             LQ++  +  A
Sbjct: 1067 PLQEYLGINAA 1077


>gi|344342950|ref|ZP_08773820.1| carbamoyl-phosphate synthase, large subunit [Marichromatium
            purpuratum 984]
 gi|343805502|gb|EGV23398.1| carbamoyl-phosphate synthase, large subunit [Marichromatium
            purpuratum 984]
          Length = 1069

 Score = 1271 bits (3290), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 638/1088 (58%), Positives = 812/1088 (74%), Gaps = 27/1088 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD+  ILI+G+GPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIHSILIIGSGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+T   V  ++E+ERPDALLPTMGGQTALN A+ L   G LE+YGVELIGA  +A
Sbjct: 63   ATYIEPVTWRAVAAIIERERPDALLPTMGGQTALNCALDLVREGVLEEYGVELIGASREA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDRDLF+QAM+ IG+  P S I ++L+E   +   IG FP IIRP+FT+GG+GGGI
Sbjct: 123  IDKAEDRDLFRQAMRKIGLDMPRSAIAHSLEEANQVQASIG-FPAIIRPSFTMGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEFE IC+ GL  S T ++L+E+S+LGWKEYE+EV+RD ADN +IICSIEN+DPMG
Sbjct: 182  AYNQEEFEEICRRGLDLSPTRELLIEESVLGWKEYEMEVVRDRADNCIIICSIENLDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ +RD S+A++REIGV+ GGSNVQFA+NP +G ++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQIMRDASLAVLREIGVDTGGSNVQFAINPENGRMIVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT   TPASFEP+IDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGYTLDELRNDITGGATPASFEPTIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            FAFEKF  ++  LTTQMKSVGE MA+GRTFQES QKALR LE     +G   + +   D 
Sbjct: 362  FAFEKFAQADARLTTQMKSVGEVMAIGRTFQESLQKALRGLE--IDKYGLEEIVD-PADP 418

Query: 507  E---QLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLT 563
            E   +L+  LR    DR+  +  A + G+ +++IHELS I+ WFL + ++LI  E+ L+ 
Sbjct: 419  EAMAKLRQELRQAGIDRLFYVADAFRMGLSLEDIHELSKIEPWFLAEIEDLIASERALVA 478

Query: 564  QSVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEA 623
              +  +  +   ++KR+GFSD++IA   ++TE  +R +R +LGV P +KRVDTCAAEF A
Sbjct: 479  AGLDGLDVERLRQLKRQGFSDRRIARLLETTEDAIRARRHALGVRPVFKRVDTCAAEFAA 538

Query: 624  NTPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMM 683
             T Y+YS+Y+ ECES P+ ++K+++LGGGPNRIGQGIEFDYCC H +F+++  GYETIM+
Sbjct: 539  TTAYLYSTYEEECESEPSDREKIMVLGGGPNRIGQGIEFDYCCVHAAFAMREDGYETIMV 598

Query: 684  NSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLD 743
            N NPETVSTDYDTSDRLYFEPLT+EDVL V++ ERP G+IVQ+GGQTPLKL+        
Sbjct: 599  NCNPETVSTDYDTSDRLYFEPLTLEDVLEVVECERPRGVIVQYGGQTPLKLA-------- 650

Query: 744  EHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAK 803
              R   A+G   V I GT+PDSID AEDRERF  +I++L + QP    A+SEA+A+A+A 
Sbjct: 651  --RALEAAG---VPIIGTTPDSIDLAEDRERFQHMIQDLGLLQPPNATARSEAEAVALAA 705

Query: 804  EIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDA 863
            +IGYP+VVRPSYVLGGRAMEIVY +  L  Y+  AV V  E PVL+D++L DAIE+DVDA
Sbjct: 706  DIGYPLVVRPSYVLGGRAMEIVYEEADLERYMREAVRVSNESPVLLDRFLDDAIEVDVDA 765

Query: 864  LADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGL 923
            ++D   +V+IGGIMEHIEQAGVHSGDSAC +P  T+ +S  D +     K+A+ LNV GL
Sbjct: 766  ISDG-QDVLIGGIMEHIEQAGVHSGDSACSLPPYTLPASIQDRMREQMAKMARALNVVGL 824

Query: 924  MNCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVI 983
            MN Q+A+    ++Y+LE NPRASRTVPFVSK+IG PLAK AA  M+G+SL + G+ +E  
Sbjct: 825  MNAQFAVKGE-EIYILEVNPRASRTVPFVSKSIGVPLAKVAARCMAGRSLAEQGYERESR 883

Query: 984  PKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLP-LSG 1042
            PKH  VKEAV PF KF G D +LGPEM+STGEVMG+  +F  A+AKAQ  AG  LP   G
Sbjct: 884  PKHYFVKEAVFPFVKFPGVDTVLGPEMKSTGEVMGVGDTFGEAYAKAQEGAGSLLPGRGG 943

Query: 1043 TVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGD 1102
               LS+ D  K  L R+A+  ++ GF + +T GTA  +   G+    V K+ EGRPH  D
Sbjct: 944  KALLSVRDADKSRLMRVARDLIEFGFSLYATHGTAAAVREAGLECVGVNKVAEGRPHLVD 1003

Query: 1103 MVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTV 1162
            M+ N ++ ++V T+ G +    D  ++RR  L +KV   TT++GA A   A++ L  +  
Sbjct: 1004 MIKNNEVSLIVNTTEG-AQAIADSAEIRRAALQHKVCYTTTIAGAEATCLALKQL--DIC 1060

Query: 1163 TMTALQDF 1170
            T+  LQD 
Sbjct: 1061 TVNRLQDL 1068


>gi|260914713|ref|ZP_05921178.1| carbamoyl-phosphate synthase [Pasteurella dagmatis ATCC 43325]
 gi|260631217|gb|EEX49403.1| carbamoyl-phosphate synthase [Pasteurella dagmatis ATCC 43325]
          Length = 1071

 Score = 1271 bits (3290), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 633/1076 (58%), Positives = 807/1076 (75%), Gaps = 22/1076 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD+  ILI+GAGPIVIGQACEFDYSG QACKAL+EEGY+V+L+NSNPATIMTDP +AD
Sbjct: 3    KRTDINTILIIGAGPIVIGQACEFDYSGAQACKALREEGYKVVLVNSNPATIMTDPNMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+    VE+++EKERPDA+LPTMGGQTALN A+ L+++G L+KY VELIGA  DA
Sbjct: 63   VTYIEPIEWRTVEKIIEKERPDAILPTMGGQTALNCALDLSKNGVLKKYNVELIGATEDA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  FK+AM+ IG+ TP S + +T DE  +   E+G FP +IRP+FT+GG+GGGI
Sbjct: 123  IDKAEDRGRFKEAMEKIGLSTPKSFVCHTFDEAWAAQAEVG-FPTLIRPSFTMGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYNK+EF AIC+ G  AS T ++L+E+S+LGWKEYE+EV+RD ADN +I+CSIEN DPMG
Sbjct: 182  AYNKDEFYAICERGFDASPTHELLIEQSVLGWKEYEMEVVRDKADNCIIVCSIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGV+ GGSNVQFA+NP +GE++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQIMRNASLAVLREIGVDTGGSNVQFAINPQNGEMIVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKK-TPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+L+++ NDIT    PASFEPSIDYVVTK+PR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGYTLNELRNDITGGLIPASFEPSIDYVVTKVPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            FAFEKFP ++  LTTQMKSVGE MA+GRTFQES QKALR LE G  G+       +  D 
Sbjct: 362  FAFEKFPKADDRLTTQMKSVGEVMAMGRTFQESLQKALRGLETGICGFNL-----MSEDL 416

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
            E+++  L  P P R+  +  A   G  +DE+H  S ID WFL Q ++L+  E  L  + +
Sbjct: 417  EKIRQELGNPGPTRILYVADAFGVGFTLDEVHHYSKIDPWFLIQIQDLVLEELALEKRVL 476

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
              +   +   +KR+GFSDK+IA  T STE  VR KR+SL + P YKRVDTCA EF ++T 
Sbjct: 477  DELDYAELRRLKRKGFSDKRIAQLTNSTESAVRNKRISLNLHPVYKRVDTCAGEFTSDTA 536

Query: 627  YMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSN 686
            Y+YS+Y+ ECES P+ KKK++ILGGGPNRIGQGIEFDYCC H S +L+ +G+ETIM+N N
Sbjct: 537  YLYSTYEEECESRPSDKKKIMILGGGPNRIGQGIEFDYCCVHASLALRESGFETIMVNCN 596

Query: 687  PETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHR 746
            PETVSTD+DTSDRLYFEPLT+EDVL +I +E+P G+IV +GGQTPLKL+  ++       
Sbjct: 597  PETVSTDFDTSDRLYFEPLTLEDVLEIIHVEKPYGVIVHYGGQTPLKLANDLY------- 649

Query: 747  LPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEIG 806
               A+G   V I GTS DSIDAAEDRERF  I+ +L+++QP    A++  +A+ +A+E+G
Sbjct: 650  ---ANG---VNIIGTSADSIDAAEDRERFQQILHKLNLKQPTNRTARNAEEAVKLAEEVG 703

Query: 807  YPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALAD 866
            YP+VVRPSYVLGGRAM+IVY  E L  Y+  AV V  + P+L+D +L++AIE+DVD + D
Sbjct: 704  YPLVVRPSYVLGGRAMQIVYNVEELKRYMREAVSVSNDSPILLDHFLNNAIEVDVDCICD 763

Query: 867  SCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNC 926
               +VVIGGIM+HIEQAG+HSGDSAC +P  ++S    D I   T  +A  L V GLMN 
Sbjct: 764  G-EDVVIGGIMQHIEQAGIHSGDSACSLPPYSLSQEVQDEIRRQTADMAFALGVKGLMNV 822

Query: 927  QYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPKH 986
            Q+A+   G +Y+LE NPRASRTVPFVSKA G PLAK AA VM+G +L + G   EV+   
Sbjct: 823  QFAV-QDGVIYVLEVNPRASRTVPFVSKATGRPLAKIAARVMAGITLKEQGIQDEVMAPF 881

Query: 987  VSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVFL 1046
             SVKEAV PF KF G D +LGPEMRSTGEVMG+  +F  AF KAQ+ AG+++P +G VFL
Sbjct: 882  YSVKEAVFPFIKFPGVDTVLGPEMRSTGEVMGVGKTFSEAFLKAQLGAGERIPKTGKVFL 941

Query: 1047 SLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVAN 1106
            S+ND  KP L  IA+   + G+ + +T GTA FL   GIAV+ + K+ EGRP+  D + N
Sbjct: 942  SVNDADKPRLLPIARQLQEAGYGLCATLGTATFLRENGIAVQIIHKVREGRPNIVDAIKN 1001

Query: 1107 GQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTV 1162
            G+I M++ T SG +    DG ++RR  L  KV + TT++GA A A+++  L  + V
Sbjct: 1002 GEIAMVINTVSGLAETVTDGHEIRRSALQQKVFLQTTLAGAEALADSVSRLADSYV 1057


>gi|163847334|ref|YP_001635378.1| carbamoyl-phosphate synthase large subunit [Chloroflexus aurantiacus
            J-10-fl]
 gi|222525180|ref|YP_002569651.1| carbamoyl-phosphate synthase large subunit [Chloroflexus sp.
            Y-400-fl]
 gi|163668623|gb|ABY34989.1| carbamoyl-phosphate synthase, large subunit [Chloroflexus aurantiacus
            J-10-fl]
 gi|222449059|gb|ACM53325.1| carbamoyl-phosphate synthase, large subunit [Chloroflexus sp.
            Y-400-fl]
          Length = 1097

 Score = 1271 bits (3289), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 646/1106 (58%), Positives = 809/1106 (73%), Gaps = 43/1106 (3%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTDL  ILI+G+GPIVIGQACEFDYSGTQACKAL+EEGY V+L+NSNPATIMTDPGLAD
Sbjct: 3    KRTDLHTILIIGSGPIVIGQACEFDYSGTQACKALREEGYRVVLVNSNPATIMTDPGLAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+T   +E+++ +ERPDA+LPT+GGQTALNLAVAL E+G LEKYGVELIGA ++A
Sbjct: 63   ATYIEPLTVPSLERIIARERPDAILPTVGGQTALNLAVALHEAGILEKYGVELIGASVEA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            ++ AEDR  FK  M  IG++ P SG   TL+E ++I  + G FP IIRP+FTLGG GGGI
Sbjct: 123  VRIAEDRQRFKDKMIEIGLQVPRSGTATTLEEALAIVAQTG-FPAIIRPSFTLGGEGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN EEF  I + GL AS  SQVLVE+S+LGWKE+ELEVMRD  DN VIICSIEN+DPMG
Sbjct: 182  AYNMEEFRTIVERGLDASPVSQVLVEESVLGWKEFELEVMRDRNDNGVIICSIENIDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPA TLTD+EYQR+RD  +A++R +GVE GGSNVQFAV+P DG + VIEMN
Sbjct: 242  VHTGDSITVAPAMTLTDREYQRMRDMGLAVLRAVGVETGGSNVQFAVSPTDGRIYVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRF 447
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++PNDIT++TPASFEP++DYVV KIPRF
Sbjct: 302  PRVSRSSALASKATGFPIAKIAAKLAVGYTLDELPNDITRETPASFEPTLDYVVVKIPRF 361

Query: 448  AFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDWE 507
             FEKFP ++  LTT MKSVGE MA+GRTF E+FQKA RSLE G +GWG      +  + E
Sbjct: 362  TFEKFPQADQTLTTSMKSVGEVMAIGRTFAEAFQKAWRSLEQGRAGWGADGRDAI--EPE 419

Query: 508  QLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSVS 567
            +L+  L  P+PDRM  I  A++ GM V++I  L+ ID WF+ Q ++++++E  L    ++
Sbjct: 420  RLRERLITPHPDRMFYIRYALQSGMSVEQISNLTKIDPWFIRQLEQIVNLEGRLRAFDLA 479

Query: 568  NMTKDDFYEVKRRGFSDKQIAFATK--------STEKEVREKRLSLGVIPSYKRVDTCAA 619
             +  D   + KR GFSD Q+A   +        S E  VR++RL LG+ P+Y RVDTCAA
Sbjct: 480  TIPPDLLRQAKRMGFSDAQLAHLLRVPAGPQRWSAELAVRQRRLELGIRPTYHRVDTCAA 539

Query: 620  EFEANTPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYE 679
            EF A TPY+YSSY+ E E+ PT +KKV+ILG GPNRIGQGIEFDYCC H  F L++ GYE
Sbjct: 540  EFPAFTPYLYSSYESEDEAEPTDRKKVIILGSGPNRIGQGIEFDYCCSHAVFGLRALGYE 599

Query: 680  TIMMNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIH 739
            TIM+N NPETVSTDYDT+DRLYFEPLT+EDVLNV+D+ERP+G+I+QFGGQTPLKL+    
Sbjct: 600  TIMVNCNPETVSTDYDTADRLYFEPLTLEDVLNVVDVERPDGVIIQFGGQTPLKLA---- 655

Query: 740  QYLDEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADAL 799
                  R   A G   V IWGT+P++ID AEDR+RF A++KEL+I  P+ G A S  +AL
Sbjct: 656  ------RALEAVG---VPIWGTAPEAIDLAEDRDRFGALLKELNIPAPEHGSATSWEEAL 706

Query: 800  AIAKEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEI 859
             +A+ IGYPVVVRPSYVLGGRAM IVY D  L  Y+  AV   PE PVLID++L DA E+
Sbjct: 707  TVARRIGYPVVVRPSYVLGGRAMAIVYDDAALERYMREAVAASPEHPVLIDRFLEDAFEM 766

Query: 860  DVDALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLN 919
            DVDA+ D    VVI GIME IE AGVHSGDSAC+IPT  ++   + T+  +T +LA+ L 
Sbjct: 767  DVDAVCDGH-TVVIAGIMEQIELAGVHSGDSACVIPTYMVAEEHVVTMRHYTERLAQALG 825

Query: 920  VCGLMNCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSL----ND 975
            V GLMN QYA+   G VY+LE NPRASRTVPFV+KA G P  + A    +G  L    + 
Sbjct: 826  VVGLMNIQYAM-KDGVVYVLEVNPRASRTVPFVAKATGVPWVQLAVQCAAGARLKVDQDQ 884

Query: 976  LGFTKEVIP------------KHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSF 1023
            +  T  V+P            +   VKE VLP+ +F G D LLGPEM+STGE MG   +F
Sbjct: 885  VYVTHPVLPDSPRYRLDVSSEQRFHVKEVVLPWSRFSGVDTLLGPEMKSTGEGMGSGATF 944

Query: 1024 PIAFAKAQIAAGQKLPLSGTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELK 1083
              AFAKAQ+A G  LP SG  FLS+ND  K  L  IA+    +GF +++TSGTA +L+  
Sbjct: 945  GEAFAKAQMACGSHLPTSGNAFLSVNDRDKATLLPIARELAALGFNLLATSGTAAYLQQH 1004

Query: 1084 GIAVERVLKMHEGRPHAGDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITT 1143
            G+ V  + K++EGRP+A D + NG+I ++V T  G  +   D   +RR  + Y VP +TT
Sbjct: 1005 GLKVTPIYKVNEGRPNAVDYIKNGEIALIVNTPLG-KVSFFDEAAIRRAAITYGVPTLTT 1063

Query: 1144 VSGALANAEAIRSLKSNTVTMTALQD 1169
            +SGA A  +AI++L++   T+ +LQ+
Sbjct: 1064 LSGAAAAVQAIQALRAGQWTLQSLQE 1089



 Score =  238 bits (606), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 154/447 (34%), Positives = 235/447 (52%), Gaps = 29/447 (6%)

Query: 55  RYSRSRVRASSAKIDSSAELSNGAASSKDQKLGKRTDLRKILILGAGPIVIGQACEFDYS 114
           R +  RV   +A+  +       +  S+D+   + TD +K++ILG+GP  IGQ  EFDY 
Sbjct: 528 RPTYHRVDTCAAEFPAFTPYLYSSYESEDE--AEPTDRKKVIILGSGPNRIGQGIEFDYC 585

Query: 115 GTQACKALKEEGYEVILINSNPATIMTDPGLADRTYITPMTPELVEQVLEKERPDALLPT 174
            + A   L+  GYE I++N NP T+ TD   ADR Y  P+T E V  V++ ERPD ++  
Sbjct: 586 CSHAVFGLRALGYETIMVNCNPETVSTDYDTADRLYFEPLTLEDVLNVVDVERPDGVIIQ 645

Query: 175 MGGQTALNLAVALAESGALEKYGVELIGAKLDAIKKAEDRDLFKQAMKTIGVKTPPSGIG 234
            GGQT L LA       ALE  GV + G   +AI  AEDRD F   +K + +  P  G  
Sbjct: 646 FGGQTPLKLA------RALEAVGVPIWGTAPEAIDLAEDRDRFGALLKELNIPAPEHGSA 699

Query: 235 NTLDECISIANEIGEFPLIIRPAFTLGGTGGGIAYNKEEFEAICKAGLAASLTSQVLVEK 294
            + +E +++A  IG +P+++RP++ LGG    I Y+    E   +  +AAS    VL+++
Sbjct: 700 TSWEEALTVARRIG-YPVVVRPSYVLGGRAMAIVYDDAALERYMREAVAASPEHPVLIDR 758

Query: 295 SLLGWKEYELEVMRDLADNVVIICSIENVDPMGVHTGDSITVAPAQTLTDKEYQRLRDYS 354
            L    E +++ + D    VVI   +E ++  GVH+GDS  V P   + ++    +R Y+
Sbjct: 759 FLEDAFEMDVDAVCD-GHTVVIAGIMEQIELAGVHSGDSACVIPTYMVAEEHVVTMRHYT 817

Query: 355 IAIIREIGVECGGSNVQFAVNPVDGEVMVIEMNPRVSRSSALASKATGFPIAKMAAKLSV 414
             + + +GV  G  N+Q+A+   DG V V+E+NPR SR+    +KATG P  ++A + + 
Sbjct: 818 ERLAQALGV-VGLMNIQYAMK--DGVVYVLEVNPRASRTVPFVAKATGVPWVQLAVQCAA 874

Query: 415 GYSL----DQI-------PNDITKKTPASFEPSIDYVVTKIPRFAFEKFPGSEPLLTTQM 463
           G  L    DQ+       P+    +   S E         +P   + +F G + LL  +M
Sbjct: 875 GARLKVDQDQVYVTHPVLPDSPRYRLDVSSEQRFHVKEVVLP---WSRFSGVDTLLGPEM 931

Query: 464 KSVGEAMALGRTFQESFQKALRSLECG 490
           KS GE M  G TF E+F KA   + CG
Sbjct: 932 KSTGEGMGSGATFGEAFAKA--QMACG 956


>gi|389578453|ref|ZP_10168480.1| carbamoyl-phosphate synthase, large subunit [Desulfobacter postgatei
            2ac9]
 gi|389400088|gb|EIM62310.1| carbamoyl-phosphate synthase, large subunit [Desulfobacter postgatei
            2ac9]
          Length = 1076

 Score = 1271 bits (3289), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 639/1091 (58%), Positives = 817/1091 (74%), Gaps = 31/1091 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KR D+ KILI+GAGPI+I QACEFDYSGTQACKALKEEG+EV+LINSNPATIMTDP  AD
Sbjct: 3    KRNDIHKILIIGAGPIIISQACEFDYSGTQACKALKEEGFEVVLINSNPATIMTDPETAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
            R YI P+T E + +V+E ERPDA+LPT+GGQTALN  +  A++G  E+Y +ELIGA +DA
Sbjct: 63   RVYIEPVTAETLCKVIEIERPDAVLPTLGGQTALNTTIDAAKTGIFERYNIELIGASIDA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR+LF+ AM  IG++ P SG    + E   +A +IG FP+I+RP+FTLGGTGGG+
Sbjct: 123  INKAEDRELFRDAMNKIGLRIPKSGFAVNMTEVEEVAQQIG-FPIIVRPSFTLGGTGGGV 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN EE   + K+GL ASL +QV++E+S+LGWKE+ELEVMRD ADNVVIICSIEN+D MG
Sbjct: 182  AYNMEELANLAKSGLDASLITQVMLEESVLGWKEFELEVMRDHADNVVIICSIENIDAMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTL+DKEYQ LRD SIAIIREIGV+ GGSNVQFAVNP +G+++V+EMN
Sbjct: 242  VHTGDSITVAPAQTLSDKEYQALRDASIAIIREIGVDTGGSNVQFAVNPDNGDIIVVEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRF 447
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD+IPNDIT +T A FEPSIDY V KIPR+
Sbjct: 302  PRVSRSSALASKATGFPIAKIAAKLAVGYTLDEIPNDITGETMACFEPSIDYCVVKIPRW 361

Query: 448  AFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCS-------NVK 500
             FEKFP ++ +LTT MKSVGE M++GRTF+E+ QK LRSLE G +G+G         +V 
Sbjct: 362  TFEKFPETDDILTTAMKSVGETMSIGRTFKEALQKGLRSLEIGRAGFGADGKDPAPGSVA 421

Query: 501  ELDWDWEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQF 560
             +D     L+Y L  PN  R+  I  A++ GM +  IH+L+ ID WFL Q K+++D+E+ 
Sbjct: 422  GMD-----LEYKLSTPNSQRIFYIKYAIEHGMPITMIHDLTDIDPWFLYQMKQIVDLEKQ 476

Query: 561  LLTQSVSNMTKDDFYEVKRRGFSDKQIAFATKS-TEKEVREKRLSLGVIPSYKRVDTCAA 619
            L    + N+ KD F + K+ GFSD Q+A+ +   T+K++ +KR  LG++P YK VDTCAA
Sbjct: 477  LKLAGM-NLPKDLFEKAKKYGFSDTQLAYLSGGLTDKQIEQKRKDLGIVPVYKLVDTCAA 535

Query: 620  EFEANTPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYE 679
            EF A TPY YS+Y+ ECE+  + KKKV+ILGGGPNRIGQGIEFDYCC H SF+L+  G E
Sbjct: 536  EFRAVTPYYYSTYESECEARVSDKKKVIILGGGPNRIGQGIEFDYCCVHASFALREEGVE 595

Query: 680  TIMMNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIH 739
            +IM+NSNPETVSTDYDTSD+LYFEPLT EDVL++++ E+P G+IVQFGGQTPL L+  + 
Sbjct: 596  SIMVNSNPETVSTDYDTSDKLYFEPLTREDVLHIVEKEKPFGVIVQFGGQTPLNLATDLQ 655

Query: 740  QYLDEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADAL 799
            +               V I GTSP+SID AEDR+ F A++K+L + QP  GIA S  +A+
Sbjct: 656  K-------------AGVPIIGTSPESIDRAEDRDLFAAMLKKLGLRQPDNGIAYSYQEAV 702

Query: 800  AIAKEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEI 859
             +A++IGYPV+VRPS+VLGGRAM+IVY ++ L +Y E AV+  P++PVLIDK+L +A E+
Sbjct: 703  KVARDIGYPVMVRPSFVLGGRAMKIVYDEKDLESYFELAVQASPDKPVLIDKFLEEAFEL 762

Query: 860  DVDALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLN 919
            DVDA++D   + +IGG+MEHIE+AG+HSGDSAC++P  +I +  +  +S     +AK LN
Sbjct: 763  DVDAISDG-EDTIIGGMMEHIEEAGIHSGDSACVLPPYSIEAHHIKEMSDAAKAIAKELN 821

Query: 920  VCGLMNCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFT 979
            V GLMN Q+ I     VY++E NPRASRT+PFVSKAIG PLAK A  VM GK+L +LG T
Sbjct: 822  VKGLMNIQFGIMND-TVYIIEVNPRASRTIPFVSKAIGVPLAKLATKVMLGKTLKELGVT 880

Query: 980  KEVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLP 1039
             EVIP +  VKEAV+PF++F+  D +LGPEM+STGEVMGID     A AKAQ AAGQKLP
Sbjct: 881  TEVIPPYYCVKEAVMPFDRFENVDPVLGPEMKSTGEVMGIDKDLGAAVAKAQFAAGQKLP 940

Query: 1040 LSGTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPH 1099
              GTVF+S+ D  K     +AK F D+GF I++T GT  FLE   I    V K+  GRPH
Sbjct: 941  KEGTVFISVQDKDKKAALPVAKCFHDMGFTIMATRGTVTFLEENKIPSTFVKKVSAGRPH 1000

Query: 1100 AGDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKS 1159
              D V NG+IQ +++ +   S  Q DG ++RR  + YK+P  TT  GA A + AI+++K 
Sbjct: 1001 VVDAVKNGEIQ-LILNTGASSQTQRDGYEIRRAAIKYKIPYATTTDGARAISLAIQAMKK 1059

Query: 1160 NTVTMTALQDF 1170
              +T+  LQ +
Sbjct: 1060 ENLTVKPLQYY 1070


>gi|410693998|ref|YP_003624620.1| Carbamoyl-phosphate synthase large chain (Carbamoyl-phosphate
            synthetase ammonia chain) [Thiomonas sp. 3As]
 gi|294340423|emb|CAZ88804.1| Carbamoyl-phosphate synthase large chain (Carbamoyl-phosphate
            synthetase ammonia chain) [Thiomonas sp. 3As]
          Length = 1074

 Score = 1271 bits (3289), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 641/1091 (58%), Positives = 808/1091 (74%), Gaps = 30/1091 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KR+D++ ILI+GAGPIVIGQACEFDYSG QACKAL+EEGY+VIL+NSNPATIMTDP  AD
Sbjct: 3    KRSDIKSILIIGAGPIVIGQACEFDYSGAQACKALREEGYKVILVNSNPATIMTDPETAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+T ++VE ++EKERPDA+LPTMGGQTALN A+ L  +G L KYGVELIGAK  A
Sbjct: 63   VTYIEPITWQVVETIIEKERPDAILPTMGGQTALNCALDLHHNGVLGKYGVELIGAKPAA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I  AEDR  FKQAM  IG+ +  SGI +TL+E   +   IG FP+IIRP+FTLGGTGGGI
Sbjct: 123  IDMAEDRQKFKQAMTRIGLGSARSGIAHTLEEAWGVQKTIG-FPVIIRPSFTLGGTGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN EEFE ICK G+ AS TS++L+E+SL+GWKE+E+EV+RD ADN +I+CSIEN+DPMG
Sbjct: 182  AYNPEEFETICKRGIEASPTSELLIEESLIGWKEFEMEVVRDSADNCIIVCSIENLDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ +R+ SIA++REIGV+ GGSNVQFAVNP DG ++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQIMRNASIAVLREIGVDTGGSNVQFAVNPKDGRLIVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKK-TPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT   TPASFEP+IDYVVTK+PR
Sbjct: 302  PRVSRSSALASKATGFPIAKIAAKLAVGYTLDELRNDITGGVTPASFEPTIDYVVTKVPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            FAFEKFP ++  LTTQMKSVGE MA+GRTFQESFQKALR LE G  G     + E   D 
Sbjct: 362  FAFEKFPQADSRLTTQMKSVGEVMAMGRTFQESFQKALRGLEVGVDG-----MNEKTQDR 416

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQ-S 565
            E L+  L  P  +R+  +  A  +GM +DE+H+L+ ID WFL Q ++++  E  L    +
Sbjct: 417  EVLEKELGEPGSERIWYVGDAFAQGMSLDEVHQLTRIDPWFLAQIQDIVQTELELERNFT 476

Query: 566  VSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANT 625
            +  + ++  Y +K++GFSD+++A    +TE  VR +R SL V P +KRVDTCAAEF   T
Sbjct: 477  LDQLDREHLYALKQKGFSDRRLAKLLHTTETAVRNRRRSLQVRPVFKRVDTCAAEFGTQT 536

Query: 626  PYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNS 685
             Y+YSSYD ECE+APT +KK+++LGGGPNRIGQGIEFDYCC H + ++++ GYETIM+N 
Sbjct: 537  AYLYSSYDEECEAAPTTRKKIMVLGGGPNRIGQGIEFDYCCVHAALAMRADGYETIMVNC 596

Query: 686  NPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEH 745
            NPETVSTDYDTSDRLYFEPLT+EDVL V+D ERP G+IVQ+GGQTPLKL+L +       
Sbjct: 597  NPETVSTDYDTSDRLYFEPLTLEDVLEVVDKERPTGVIVQYGGQTPLKLALDLE------ 650

Query: 746  RLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEI 805
                A+G   V I GTSPD ID AEDRERF  ++++L + QP    A+SEA+AL  A+EI
Sbjct: 651  ----ANG---VPIIGTSPDMIDMAEDRERFQHLVEQLGLLQPPNRTARSEAEALTKAEEI 703

Query: 806  GYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALA 865
            GYP+VVRPSYVLGGRAMEIV+    L  Y+  AV+V  + PVL+D++L+DAIE DVDA+ 
Sbjct: 704  GYPLVVRPSYVLGGRAMEIVHEQRDLERYMREAVKVSHDSPVLLDRFLNDAIECDVDAIC 763

Query: 866  DSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMN 925
            D    V IGG+MEHIEQAGVHSGDSAC +P  ++S++ +  I   T+KLA  L V GLMN
Sbjct: 764  DGT-EVFIGGVMEHIEQAGVHSGDSACSLPPYSLSAATVARIKEQTVKLAHGLKVVGLMN 822

Query: 926  CQYAITT---SGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEV 982
             Q+AI        ++LLE NPRASRTVPFVSKA G  LAK AA  M+G++L   G T+E+
Sbjct: 823  VQFAIQQLDGEDRIFLLEVNPRASRTVPFVSKATGLQLAKIAARCMAGQTLAQQGITREI 882

Query: 983  IPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLP--- 1039
             P +  VKEAV PF KF G D +LGPEM+STGEVMG+  +F  AF K+Q+AAG +LP   
Sbjct: 883  TPPYYCVKEAVFPFNKFPGVDPILGPEMKSTGEVMGVGRTFGEAFVKSQLAAGTRLPDPQ 942

Query: 1040 LSGTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPH 1099
              G VFLS+    KP    +A+  + +GF +V+T GTA  +   G+ V+ + K+ EGRP+
Sbjct: 943  AGGKVFLSVKQSDKPDAVEVARQLVAMGFGVVATRGTAAAIAEAGVEVQVINKVTEGRPN 1002

Query: 1100 AGDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKS 1159
              DM+ + +I +++ T         D   +R   LA +V   TT+SGALA  E ++ L+ 
Sbjct: 1003 IVDMLKSNEIVLVINTVEERRNAITDSRAIRTSALAARVTTYTTISGALAAVEGMKQLQK 1062

Query: 1160 NTVTMTALQDF 1170
              + +  LQ F
Sbjct: 1063 --IAVYPLQSF 1071


>gi|168703983|ref|ZP_02736260.1| carbamoyl-phosphate synthase (glutamine-hydrolyzing) large chain
            [Gemmata obscuriglobus UQM 2246]
          Length = 1114

 Score = 1271 bits (3289), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 642/1130 (56%), Positives = 819/1130 (72%), Gaps = 58/1130 (5%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++KIL++G+GPI+IGQACEFDYSGTQACKAL+EEGY V+L+NSNPATIMTDP  AD
Sbjct: 3    KRTDIKKILLIGSGPIIIGQACEFDYSGTQACKALREEGYTVVLVNSNPATIMTDPETAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
            RTYI P+T E+VE+++  ERPDALLPT+GGQTALN A+ L + G L KYGVE+IGA  D 
Sbjct: 63   RTYIEPITWEVVEKIIAAERPDALLPTLGGQTALNTAMDLFKRGVLAKYGVEMIGADADV 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  FK A+  IGV  P S + +TL+E +   +EIG  P ++RP+FT+GG+GGGI
Sbjct: 123  IDKAEDRQRFKDAVLKIGVAVPKSVVVHTLEEAMRALDEIG-LPCVLRPSFTMGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN++E+  I   GLA S T++VLVE+S++GWKEYELEVMRD ADNVVIICSIEN+DPMG
Sbjct: 182  AYNRDEYRDIITHGLALSPTTEVLVEESVIGWKEYELEVMRDKADNVVIICSIENLDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTL+DKEYQR+RD +  IIREIGVE GGSN+QFA+NP DG ++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLSDKEYQRMRDKAKDIIREIGVETGGSNIQFAINPADGRMIVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRF 447
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT++TPA FEP+IDYVVTK+PRF
Sbjct: 302  PRVSRSSALASKATGFPIAKIAAKLAVGYTLDELKNDITRETPACFEPTIDYVVTKVPRF 361

Query: 448  AFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDW--- 504
            AFEKFP +   LTTQMKSVGE MA+GRTF+ES QKALR LE G  G GC   K   W   
Sbjct: 362  AFEKFPEANATLTTQMKSVGETMAIGRTFKESLQKALRGLEVGRFGLGCD--KRDRWGTP 419

Query: 505  ---DWEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFL 561
                 E++   L  PN DR+  +  AM  GM V+EIH+ S ID WFL   +EL+DVE  L
Sbjct: 420  NAPSLEEITVKLSNPNADRIWYVRYAMLAGMTVEEIHQRSRIDPWFLRAIRELVDVEGEL 479

Query: 562  L-TQSVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAE 620
                S+  +T +   + K+ GF D+Q+A   + +E EVR+ R + GV   +K VDTCAAE
Sbjct: 480  RGVSSLDAVTPELMLKAKQHGFIDRQLAALWQVSEAEVRKLRTAQGVTAVFKSVDTCAAE 539

Query: 621  FEANTPYMYSSYDFECESAPTQ---------------------KKKVLILGGGPNRIGQG 659
            FEA TPY YS+Y+    +  ++                     K +++ILGGGPNRIGQG
Sbjct: 540  FEAYTPYYYSTYEAGVRAQGSESGVPTGSSLLPGEDEVRPGIGKPRIMILGGGPNRIGQG 599

Query: 660  IEFDYCCCHTSFSLQSAGYETIMMNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERP 719
            IEFDYCCC  +F+L++ GYE IM+NSNPETVSTDYDTSD L+FEPLT EDV+N+ +  +P
Sbjct: 600  IEFDYCCCQAAFALRARGYEVIMVNSNPETVSTDYDTSDHLFFEPLTPEDVINIHERMKP 659

Query: 720  EGIIVQFGGQTPLKLSLPIHQYLDEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAII 779
            EG+IVQFGGQTPL L+ P+                 V I GTS DSID AE+RERF  ++
Sbjct: 660  EGVIVQFGGQTPLNLATPLQSM-------------GVPIIGTSVDSIDIAENRERFARLV 706

Query: 780  KELSIEQPKGGIAKSEADALAIAKEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAV 839
             +L + QP  G A  EA AL +A++IG+P++VRPS+VLGGR M+IVY ++ L  Y+   V
Sbjct: 707  TDLGLLQPANGTAVDEAQALRVARKIGFPILVRPSFVLGGRDMKIVYNEDELTAYIRR-V 765

Query: 840  EVD--PERPVLIDKYLSDAIEIDVDALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTK 897
            E D   +RPVLID++L +A E+DVD L+D     VIGG+M+HIE+AG+HSGDSAC+IP  
Sbjct: 766  EPDLSRDRPVLIDQFLENATEVDVDCLSDGT-RTVIGGVMQHIEEAGIHSGDSACVIPPY 824

Query: 898  TISSSCLDTISSWTIKLAKRLNVCGLMNCQYAI---------TTSGDVYLLEANPRASRT 948
            ++ ++ ++ I   T KLA  LNV GLMN Q+A+         T +  VY+LEANPRASRT
Sbjct: 825  SLPATVINEIKVQTRKLAAALNVKGLMNIQFAVAGIRGGVTATEAAKVYILEANPRASRT 884

Query: 949  VPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPKHVSVKEAVLPFEKFQGCDVLLGP 1008
            +PFVSKA G PLA+ AALVM GK+L++LG   EVIP H S+KE+V PF KF G D++LGP
Sbjct: 885  IPFVSKATGVPLARLAALVMVGKTLDELGVKDEVIPTHYSIKESVFPFNKFPGVDIILGP 944

Query: 1009 EMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVFLSLNDLTKPHLERIAKAFLDIGF 1068
            EM+STGEVMGID S P+AFAKAQ+AA  +LP  GTVF+S+ +  K     IA+ F ++GF
Sbjct: 945  EMKSTGEVMGIDDSMPMAFAKAQLAASSRLPEGGTVFISVANRDKDATVPIARGFAELGF 1004

Query: 1069 KIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVANGQIQMMVITSSGDSLDQIDGLK 1128
            ++++T GTA FL  +G+ VE V K+ EGRP+  D + NG +Q+++ T +G      D  +
Sbjct: 1005 RVIATRGTAAFLRERGVPVEDVPKIAEGRPNLLDHMKNGSVQLIINTPTGRG-SSTDESR 1063

Query: 1129 LRRRGLAYKVPVITTVSGALANAEAIRSLKSNTVTMTALQDFFDVETASG 1178
            +R   +A +V  ITT+S A A  EA R+LK   +T+TALQD F  + A G
Sbjct: 1064 IRAEAVASRVTAITTISAAQAAVEACRALKQRQLTVTALQDRFPTQKAPG 1113


>gi|425744659|ref|ZP_18862714.1| carbamoyl-phosphate synthase, large subunit [Acinetobacter baumannii
            WC-323]
 gi|425490255|gb|EKU56555.1| carbamoyl-phosphate synthase, large subunit [Acinetobacter baumannii
            WC-323]
          Length = 1077

 Score = 1271 bits (3289), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 631/1080 (58%), Positives = 799/1080 (73%), Gaps = 36/1080 (3%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILI+GAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIKSILIIGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPAMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+T + V Q++EKERPDA+LPTMGGQTALN A+AL E G LEKY VELIGA  DA
Sbjct: 63   ATYIEPITWQTVAQIIEKERPDAVLPTMGGQTALNCALALDEHGVLEKYNVELIGASKDA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I+KAEDR LF  AM+ IG++ P + I  T++E ++I    G FP+IIRP+FT+GG+GGGI
Sbjct: 123  IEKAEDRKLFDIAMRKIGLECPKAAIAETMEEALAIQAGFG-FPVIIRPSFTMGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEF  IC+ G   S T Q+L+++SL+GWKEYE+EV+RD  DN +I+C+IEN DPMG
Sbjct: 182  AYNREEFLEICERGFDLSPTHQLLIDESLIGWKEYEMEVVRDKNDNCIIVCAIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGVE GGSNVQF +NP DG ++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQLMRNASVAVLREIGVETGGSNVQFGINPKDGRMVVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKK-TPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT   TPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKIAAKLAVGYTLDELKNDITGGVTPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGW------GCSNVK 500
            F FEKFP +EP+LTTQMKSVGE MA+GR FQES QKALR LE G SG+      G +N K
Sbjct: 362  FNFEKFPQAEPVLTTQMKSVGEVMAIGRNFQESVQKALRGLEVGVSGFDEKIEAGTANAK 421

Query: 501  ELDWDWEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQF 560
            ++      +   L+VP P+R+  +  A + G  +D++ E + ID+WFL Q +++I  E  
Sbjct: 422  DI------ILKELKVPGPERIWYVADAFRHGFSLDDVFEATKIDRWFLIQIEDIIKTEAQ 475

Query: 561  LLTQSVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAE 620
            + T    ++  D+    KR+G SD +IA     ++K+ R++R +LGV P YKRVDTCAAE
Sbjct: 476  VKTLGFGDLNADNIRSFKRKGLSDLRIADLMGISQKQFRKQRWNLGVYPVYKRVDTCAAE 535

Query: 621  FEANTPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYET 680
            FE+ T YMYS+YD ECE+ P+ + K++++GGGPNRIGQGIEFDYCC H + +++  GYET
Sbjct: 536  FESGTAYMYSTYDEECEANPSNRDKIMVIGGGPNRIGQGIEFDYCCVHAALAMREDGYET 595

Query: 681  IMMNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQ 740
            IM+N NPETVSTDYDTSDRLYFEP+T+EDVL ++  E+P+G+IVQ+GGQTPLKL+    +
Sbjct: 596  IMVNCNPETVSTDYDTSDRLYFEPVTLEDVLEIVRTEKPKGVIVQYGGQTPLKLA----R 651

Query: 741  YLDEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALA 800
             L+E   P         I GTSPD+ID AEDRERF  +I+ L + QP   I KS  + ++
Sbjct: 652  ALEEAGTP---------IIGTSPDAIDRAEDRERFQQMIQRLQLRQPNNSIVKSAEEGIS 702

Query: 801  IAKEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEID 860
             A ++GYP+VVRPSYVLGGRAMEIVY +E L  YL  AV+   E PVL+D +L DA E+D
Sbjct: 703  EAAKVGYPLVVRPSYVLGGRAMEIVYNEEELKRYLREAVQASNEAPVLLDHFLDDATEVD 762

Query: 861  VDALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNV 920
            VD ++D   +VVIGGIM+HIEQAG+HSGDSAC IP  ++S    D +   T+ +AK L V
Sbjct: 763  VDCVSDG-KDVVIGGIMQHIEQAGIHSGDSACSIPPYSLSKEIQDEMRRQTVAMAKELGV 821

Query: 921  CGLMNCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTK 980
             GLMN Q+A+    DVY+LE NPRASRTVPFVSK IG  LAK AA  M+G+SL   GFTK
Sbjct: 822  VGLMNVQFAV-KGDDVYVLEVNPRASRTVPFVSKCIGDSLAKVAARCMAGQSLESQGFTK 880

Query: 981  EVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQK--- 1037
            E+IP H +VKEAV PF KFQG D +LGPEM+STGEVMG+  +F  AF KA + + ++   
Sbjct: 881  EIIPTHFAVKEAVFPFAKFQGVDPMLGPEMKSTGEVMGVGKTFGEAFYKAVLGSNERLPG 940

Query: 1038 LPLSGTV---FLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMH 1094
            LP  G V   FLS+ +  K ++  IA+  +D GFK+V+T+GT   L+  GI  E V K+ 
Sbjct: 941  LPTEGEVKHAFLSVRESDKKYIANIAQQLIDYGFKLVATNGTHRVLKEAGIECEAVNKVT 1000

Query: 1095 EGRPHAGDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAI 1154
            EGRPH  D + NG+I ++V T+ G    Q D   +RR  L  KV   TT++GA A  +A 
Sbjct: 1001 EGRPHIVDRLKNGEIHLIVNTTEGKQA-QYDSAMIRRAALQGKVYYTTTINGAEAVCQAF 1059


>gi|381156532|ref|ZP_09865771.1| carbamoyl-phosphate synthase, large subunit [Thiorhodovibrio sp. 970]
 gi|380881869|gb|EIC23954.1| carbamoyl-phosphate synthase, large subunit [Thiorhodovibrio sp. 970]
          Length = 1068

 Score = 1271 bits (3288), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 639/1088 (58%), Positives = 805/1088 (73%), Gaps = 26/1088 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD+  ILI+GAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIHSILIIGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+T  ++E+++E ERPDALLPTMGGQTALN A+ LA  G LE++GVE+IGA  +A
Sbjct: 63   ATYIEPITWRVLERIIEIERPDALLPTMGGQTALNTALDLARHGVLERFGVEMIGASREA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDRDLF+QAM+ IG+  P S I ++L+E   +  +IG FP IIRP+FT+GG+GGGI
Sbjct: 123  IDKAEDRDLFRQAMRRIGLDMPHSVIAHSLEEAFQVQAQIG-FPAIIRPSFTMGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN EEFE IC+ GL  S T ++L+E+S LGWKEYE+EV+RD ADN +I+CSIEN DPMG
Sbjct: 182  AYNAEEFEEICRRGLDLSPTRELLIEESALGWKEYEMEVVRDHADNCIIVCSIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGV+ GGSNVQFA+NP DG +++IEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQIMRNASLAVLREIGVDTGGSNVQFAINPADGRMIIIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+L+++ N+IT   TPASFEP+ DYVVTK+PR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGYTLNELRNEITGGATPASFEPTTDYVVTKVPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKEL--DW 504
            FAFEKFP ++  LTTQMKSVGE MA+GRTFQES QKALR LE    G   +N+ +L    
Sbjct: 362  FAFEKFPLADAHLTTQMKSVGEVMAIGRTFQESLQKALRGLETDKDGL--NNMLDLADPS 419

Query: 505  DWEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQ 564
              ++L+  +  P  +R+  +   M+ GM  +EI ELS ID WF+ Q +EL+ +   +  Q
Sbjct: 420  AIKRLRTEIAQPGAERIFYLVDGMRAGMTAEEIQELSGIDPWFIAQIEELVAIAHDVKVQ 479

Query: 565  SVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEAN 624
             +  + +     +KR+GFSD+ +A  T +TE+++R++R + GV P +KRVDTCAAEF A+
Sbjct: 480  GIDVLDEQRLRLLKRKGFSDRSLATLTGTTEQQIRDRRHACGVRPVFKRVDTCAAEFAAS 539

Query: 625  TPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMN 684
            T YMYS+Y+ ECE+ PT  KK+++LGGGPNRIGQGIEFDYCC H +F+++  GYETIM+N
Sbjct: 540  TAYMYSTYEEECEAQPTDNKKIMVLGGGPNRIGQGIEFDYCCVHAAFAMREDGYETIMVN 599

Query: 685  SNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDE 744
             NPETVSTDYDTSDRLYFEPLT+EDVL ++D E+P G+IVQ+GGQTPLKL+         
Sbjct: 600  CNPETVSTDYDTSDRLYFEPLTLEDVLEIVDKEQPFGVIVQYGGQTPLKLA--------- 650

Query: 745  HRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKE 804
             R   A+G   V I GTSPDSID AEDRERF  +I +L ++QP    A+SE +AL +A  
Sbjct: 651  -RDLEAAG---VPIIGTSPDSIDLAEDRERFQQLIHQLELKQPPNCTARSEEEALRLAAT 706

Query: 805  IGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDAL 864
            IGYP+VVRPSYVLGGRAME+VY D+ L  Y+ +AV V  E PVL+D++L DAIEIDVDA+
Sbjct: 707  IGYPLVVRPSYVLGGRAMELVYDDQELARYIRSAVSVSNESPVLLDRFLEDAIEIDVDAV 766

Query: 865  ADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLM 924
             D    V+IGGIMEHIEQAGVHSGDSAC +P  T+S+S  D +     ++   L V GLM
Sbjct: 767  CDG-ERVLIGGIMEHIEQAGVHSGDSACSLPPYTLSASVQDRLREQMSRMGLALGVRGLM 825

Query: 925  NCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIP 984
            N Q+AI    D+Y+LE NPRASRTVPFVSK+IG PLAK  A  M G+SL++ G   EV P
Sbjct: 826  NAQFAI-KGDDIYILEVNPRASRTVPFVSKSIGVPLAKVGARCMVGRSLSEQGLHAEVKP 884

Query: 985  KHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTV 1044
            KH  VKEAV PF KF G D +LGPEM+STGEVMGI  +F  AF KA   AG +LP  G  
Sbjct: 885  KHFFVKEAVFPFIKFPGVDTVLGPEMKSTGEVMGIGETFGEAFGKAVEGAGTQLPRPGKA 944

Query: 1045 FLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMV 1104
             LS+ D  K  LER+A++ L +GF++  T GTA  +   G+  E V K+ EGRPH  DM+
Sbjct: 945  MLSVRDADKCRLERVARSLLALGFQLYGTHGTAEAMRAAGLPCEGVNKVKEGRPHIVDMI 1004

Query: 1105 ANGQIQMMVITSSGDSLDQI-DGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTVT 1163
             N  I  +V TS G  +  I D  ++RR  L YKV   TT++GA A   A+   +S  + 
Sbjct: 1005 KNQDISFIVNTSEG--VQAITDSAEIRRAALQYKVSYTTTMAGAEATCLALE--QSGALR 1060

Query: 1164 MTALQDFF 1171
            +  LQD +
Sbjct: 1061 VNRLQDLY 1068


>gi|422319375|ref|ZP_16400450.1| carbamoyl-phosphate synthase large subunit [Achromobacter
            xylosoxidans C54]
 gi|317405988|gb|EFV86266.1| carbamoyl-phosphate synthase large subunit [Achromobacter
            xylosoxidans C54]
          Length = 1080

 Score = 1271 bits (3288), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 644/1078 (59%), Positives = 812/1078 (75%), Gaps = 27/1078 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTDL+ ILI+GAGPI+IGQACEFDYSG QACKALK EGY  IL+NSNPATIMTDP  AD
Sbjct: 3    KRTDLKSILIIGAGPIIIGQACEFDYSGAQACKALKAEGYRTILVNSNPATIMTDPETAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+T + VE+++E+E+PDALLPTMGGQTALN A+ LA  G L+K+ VELIGA   A
Sbjct: 63   VTYIEPITWQAVEKIIEREKPDALLPTMGGQTALNCALDLAHHGVLKKHNVELIGANEHA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECIS----IANEIGE--FPLIIRPAFTLG 261
            I+KAEDR  FKQAM  IG+++  SG+ +++DE       IA E+G   FP +IRP+FT+G
Sbjct: 123  IEKAEDRQKFKQAMTDIGLESAKSGVAHSMDEAWEVQRRIAAEVGTSGFPAVIRPSFTMG 182

Query: 262  GTGGGIAYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIE 321
            G+GGGIAYN EEFE IC+ GL AS TS++L+E+SLLGWKE+E+EV+RD ADN +I+CSIE
Sbjct: 183  GSGGGIAYNAEEFETICRRGLEASPTSELLIEESLLGWKEFEMEVVRDKADNCIIVCSIE 242

Query: 322  NVDPMGVHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEV 381
            N+DPMGVHTGDSITVAPAQTLTDKEYQ +R+ SIA++REIGV+ GGSNVQFAVNP +G +
Sbjct: 243  NLDPMGVHTGDSITVAPAQTLTDKEYQIMRNASIAVLREIGVDTGGSNVQFAVNPKNGRM 302

Query: 382  MVIEMNPRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITK-KTPASFEPSIDYV 440
            +VIEMNPRVSRSSALASKATGFPIAK+AA+L+VGY+LD++ N+IT   TPASFEPSIDYV
Sbjct: 303  IVIEMNPRVSRSSALASKATGFPIAKVAARLAVGYTLDELKNEITGGATPASFEPSIDYV 362

Query: 441  VTKIPRFAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVK 500
            VTK+PRFAFEKFP ++  LTTQMKSVGE MA+GRTFQESFQKALR LE G  G     + 
Sbjct: 363  VTKVPRFAFEKFPTADARLTTQMKSVGEVMAIGRTFQESFQKALRGLEVGVDG-----LN 417

Query: 501  ELDWDWEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQF 560
            +   D E+L+  L  P P+R+  +  A  +G  +DE+H ++ ID WFL+Q KE++D+E  
Sbjct: 418  QKTTDREKLQVELGEPGPERIWYVGDAFAQGFTLDEVHNITHIDPWFLSQIKEIVDIELA 477

Query: 561  LLTQSVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAE 620
            L  +++S++     +E+KRRGFSD+++AF   + E EVR+ R  L V P YKRVDTCAAE
Sbjct: 478  LEQKTLSDLDHATLWELKRRGFSDRRLAFLLDTVESEVRKLRHQLNVRPVYKRVDTCAAE 537

Query: 621  FEANTPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYET 680
            F   T YMYS+Y+ ECE+APT +KK+++LGGGPNRIGQGIEFDYCC H + +L+  GYET
Sbjct: 538  FATRTAYMYSTYEEECEAAPTDRKKIVVLGGGPNRIGQGIEFDYCCVHAALALRDDGYET 597

Query: 681  IMMNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQ 740
            IM+N NPETVSTDYDTSDRLYFEPLT+EDVL ++  E P G+IVQ+GGQTPLKL+     
Sbjct: 598  IMVNCNPETVSTDYDTSDRLYFEPLTLEDVLEIVHKENPVGMIVQYGGQTPLKLA----- 652

Query: 741  YLDEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALA 800
                 R   A+G   V I GTSP+SID AEDRERF  ++ +L + QP    A++E +ALA
Sbjct: 653  -----RALEANG---VPIIGTSPESIDIAEDRERFQKLLNKLGLRQPPNRTARTEGEALA 704

Query: 801  IAKEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEID 860
             A EIGYP+VVRPSYVLGGRAMEIV+  + L  Y+  AV+V  + PVL+D++L++A E+D
Sbjct: 705  HAAEIGYPLVVRPSYVLGGRAMEIVHEQQDLERYMREAVKVSNDSPVLLDRFLNNATEVD 764

Query: 861  VDALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNV 920
            VD LAD    V IGG+MEHIEQAGVHSGDSAC +P  ++S+  +  I   T  +AK LNV
Sbjct: 765  VDCLADG-ETVFIGGVMEHIEQAGVHSGDSACSLPPYSLSADVIAEIKRQTSMMAKALNV 823

Query: 921  CGLMNCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTK 980
             GLMN Q+AI   GDVY+LE NPRASRTVP+VSKA G  LAK AA  M+G++L   G T+
Sbjct: 824  SGLMNVQFAI-QGGDVYVLEVNPRASRTVPYVSKATGLQLAKIAARAMAGQTLAAQGITR 882

Query: 981  EVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPL 1040
            EV+P + SVKEAV PF KF G D +LGPEM+STGEVMG+  SF  AF K+Q+AAG +LP 
Sbjct: 883  EVVPPYFSVKEAVFPFVKFPGVDTILGPEMKSTGEVMGVGTSFGEAFVKSQLAAGVRLPE 942

Query: 1041 SGTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHA 1100
            SGTVF+S+ +  KP    +A+    +GFK+V+T GTA  +E  GI V+ V K+ EGRPH 
Sbjct: 943  SGTVFISVKNQDKPRAVEVARGLHALGFKLVATRGTAAEIEAAGIPVQLVNKVTEGRPHI 1002

Query: 1101 GDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLK 1158
             DMV NG+I +++ T         D   +R + LA +V   TT++GA A  E ++ L+
Sbjct: 1003 VDMVKNGEISLVINTVEERRNAIADSRTIRTQALAARVTFFTTIAGARAAVEGMQYLR 1060


>gi|410473941|ref|YP_006897222.1| carbamoyl-phosphate synthase large subunit [Bordetella parapertussis
            Bpp5]
 gi|408444051|emb|CCJ50754.1| carbamoyl-phosphate synthase large chain [Bordetella parapertussis
            Bpp5]
          Length = 1080

 Score = 1270 bits (3287), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 644/1078 (59%), Positives = 813/1078 (75%), Gaps = 27/1078 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTDL+ ILI+GAGPI+IGQACEFDYSG QACKALK EGY  IL+NSNPATIMTDP  AD
Sbjct: 3    KRTDLKSILIIGAGPIIIGQACEFDYSGAQACKALKAEGYRTILVNSNPATIMTDPETAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+T + VE+++E+E+PDALLPTMGGQTALN A+ LA  G L+K+ VELIGA   A
Sbjct: 63   VTYIEPITWQAVEKIIEREKPDALLPTMGGQTALNCALDLAHHGVLKKHNVELIGANEHA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECIS----IANEIGE--FPLIIRPAFTLG 261
            I+KAEDR  FKQAM  IG+++  SG+ +++DE       IA +IG   FP++IRP+FTLG
Sbjct: 123  IEKAEDRQKFKQAMTDIGLESAKSGVAHSMDEAWEVQRRIAADIGTAGFPVVIRPSFTLG 182

Query: 262  GTGGGIAYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIE 321
            G+GGGIAYN EEFE IC+ GL AS T ++L+E+SLLGWKE+E+EV+RD ADN +I+CSIE
Sbjct: 183  GSGGGIAYNAEEFEVICRRGLEASPTKELLIEESLLGWKEFEMEVVRDKADNCIIVCSIE 242

Query: 322  NVDPMGVHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEV 381
            N+DPMGVHTGDSITVAPAQTLTDKEYQ +R+ SIA++REIGV+ GGSNVQFAVNP +G +
Sbjct: 243  NLDPMGVHTGDSITVAPAQTLTDKEYQIMRNASIAVLREIGVDTGGSNVQFAVNPQNGRM 302

Query: 382  MVIEMNPRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITK-KTPASFEPSIDYV 440
            +VIEMNPRVSRSSALASKATGFPIAK+AA+L+VGY+LD++ N+IT   TPASFEP+IDYV
Sbjct: 303  IVIEMNPRVSRSSALASKATGFPIAKVAARLAVGYTLDELRNEITGGATPASFEPTIDYV 362

Query: 441  VTKIPRFAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVK 500
            VTK+PRFAFEKFP ++  LTTQMKSVGE MA+GRTFQESFQKALR LE G  G     + 
Sbjct: 363  VTKVPRFAFEKFPQADARLTTQMKSVGEVMAMGRTFQESFQKALRGLEVGVDG-----LN 417

Query: 501  ELDWDWEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQF 560
            +   D E+L+  L  P P+R+  +  A  +G  +DE+H L+ ID WFL Q KE++D+E  
Sbjct: 418  QKTTDREKLQIELGEPGPERIWYVGDAFAQGFTLDEVHGLTRIDPWFLAQIKEIVDIELA 477

Query: 561  LLTQSVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAE 620
            L  ++++++     +E+KR GFSD+++AF   S+E EVR+ R  L V P YKRVDTCAAE
Sbjct: 478  LEQKTLADLDYATLWELKRCGFSDRRLAFLLDSSESEVRKLRHQLNVRPVYKRVDTCAAE 537

Query: 621  FEANTPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYET 680
            F  NT YMYS+Y+ ECES PT +KK+++LGGGPNRIGQGIEFDYCC H + +L+  GYET
Sbjct: 538  FATNTAYMYSTYEEECESQPTDRKKIIVLGGGPNRIGQGIEFDYCCVHAALALREDGYET 597

Query: 681  IMMNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQ 740
            IM+N NPETVSTDYDTSDRLYFEPLT+EDVL ++  E P G+IVQ+GGQTPLKL+     
Sbjct: 598  IMVNCNPETVSTDYDTSDRLYFEPLTLEDVLEIVHKENPVGMIVQYGGQTPLKLA----- 652

Query: 741  YLDEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALA 800
                 R   A+G   V I GTSP+SID AEDRERF  ++ +L + QP    A++EA+ALA
Sbjct: 653  -----RALEANG---VPIIGTSPESIDVAEDRERFQKLLNKLGLRQPPNRTARTEAEALA 704

Query: 801  IAKEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEID 860
             A EIGYP+VVRPSYVLGGRAMEIV+  + L  Y+  AV+V  + PVL+D++L+DA E+D
Sbjct: 705  HASEIGYPLVVRPSYVLGGRAMEIVHEQQDLERYMREAVKVSNDSPVLLDRFLNDATEVD 764

Query: 861  VDALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNV 920
            VD LAD    V IGG+MEHIEQAGVHSGDSAC +P  ++S+  +  I   T  +AK LNV
Sbjct: 765  VDCLADG-QTVFIGGVMEHIEQAGVHSGDSACSLPPYSLSAEVIAEIKRQTTMMAKALNV 823

Query: 921  CGLMNCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTK 980
             GLMN Q+AI   GDVY+LE NPRASRTVP+VSKA G  LAK AA  M+G +L D G T+
Sbjct: 824  SGLMNVQFAI-QGGDVYVLEVNPRASRTVPYVSKATGLQLAKIAARAMAGCTLADQGITR 882

Query: 981  EVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPL 1040
            EV+P + SVKEAV PF KF G D +LGPEM+STGEVMG+  SF  AF K+Q+AAG +LP 
Sbjct: 883  EVVPPYFSVKEAVFPFVKFPGVDTILGPEMKSTGEVMGVGNSFGEAFVKSQLAAGVRLPD 942

Query: 1041 SGTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHA 1100
            SGTVF+S+ +  KP    +A+   ++GFK+V+T GTA  +E  GI V+ V K+ EGRPH 
Sbjct: 943  SGTVFISVRNQDKPRAVEVARGLHNLGFKLVATRGTAAEIEAAGIPVQVVNKVTEGRPHI 1002

Query: 1101 GDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLK 1158
             DMV NG++ +++ T         D   +R + LA ++   TT++GA A  E ++ ++
Sbjct: 1003 VDMVKNGEVSLVINTVEERRNAIADSRTIRTQALANRITFFTTIAGARAAVEGMQFMR 1060


>gi|304311953|ref|YP_003811551.1| carbamoyl-phosphate synthase large subunit [gamma proteobacterium
            HdN1]
 gi|301797686|emb|CBL45908.1| Carbamoyl-phosphate synthase large chain [gamma proteobacterium HdN1]
          Length = 1073

 Score = 1270 bits (3287), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 634/1084 (58%), Positives = 807/1084 (74%), Gaps = 20/1084 (1%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILILGAGPIVIGQACEFDYSG QACKAL+EEGY V+L+NSNPATIMTDP +AD
Sbjct: 3    KRTDIQTILILGAGPIVIGQACEFDYSGAQACKALREEGYRVVLVNSNPATIMTDPAMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  + V +V+EKERPDA+LPTMGGQTALN A+ LA+ G L+++GVELIGA  DA
Sbjct: 63   STYIEPVNWQTVAKVIEKERPDAILPTMGGQTALNCALDLAKHGVLKEFGVELIGANADA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR+ F +AMK+IG++TP S I ++L+E + + + +G FP IIRP+FTLGG+GGGI
Sbjct: 123  IDKAEDRERFDRAMKSIGLETPRSAIAHSLEEALQVQDRLG-FPCIIRPSFTLGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEF  IC  GL  S TS++L+++SL+GWKE+E+EV+RD  DN +I+CSIEN DPMG
Sbjct: 182  AYNREEFVEICNRGLDLSPTSELLIDESLIGWKEFEMEVVRDRNDNCIIVCSIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAP+QTLTDKEYQ +RD SIA++REIGVE GGSNVQF +NPVDG ++VIEMN
Sbjct: 242  VHTGDSITVAPSQTLTDKEYQIMRDASIAVLREIGVETGGSNVQFGINPVDGRMVVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITK-KTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL++GY+LD++ NDIT  KTPASFEPSIDYVVTK+PR
Sbjct: 302  PRVSRSSALASKATGFPIAKIAAKLAIGYTLDELMNDITGGKTPASFEPSIDYVVTKVPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            F FEKFP ++  LTTQMKSVGE MA+GRTFQES  KALR LE G  G         +   
Sbjct: 362  FNFEKFPLADATLTTQMKSVGEVMAIGRTFQESLNKALRGLEVGVDGLDPIIDLTAEDAR 421

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
            + L+  L+VP  +R+ A+  A + GM V+EI E + ID WFL Q +ELI VE+ L  Q +
Sbjct: 422  QVLRQKLKVPCAERVWALGDAFRFGMTVEEIFEETAIDPWFLVQIQELISVEKSLEKQGL 481

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
            +++ KD  Y +KR+GFSD +IA      EK VR++RL LGV+P+YKRVDTCAAEF   T 
Sbjct: 482  ADLDKDRIYRLKRKGFSDARIATLLGVAEKSVRQRRLDLGVLPTYKRVDTCAAEFATTTA 541

Query: 627  YMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSN 686
            YMYS+Y+ ECE+ P+ ++K+++LGGGPNRIGQGIEFDYCC H + +++  GYETIM+N N
Sbjct: 542  YMYSTYEEECEAEPSNREKIMVLGGGPNRIGQGIEFDYCCVHAALAMREDGYETIMVNCN 601

Query: 687  PETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHR 746
            PETVSTDYDTSDRLYFEP+T+EDVL+++ LE+P+G+IVQFGGQTPLKL+          R
Sbjct: 602  PETVSTDYDTSDRLYFEPVTLEDVLSIVALEKPKGVIVQFGGQTPLKLA----------R 651

Query: 747  LPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEIG 806
               A+G   V I GTSPD+ID AEDRERF  +I  L + QP    A+SE +A+  A+EIG
Sbjct: 652  ALEAAG---VPIIGTSPDAIDRAEDRERFQQMINRLGLLQPPNRTARSEEEAVRYAEEIG 708

Query: 807  YPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALAD 866
            YP+VVRPSYVLGGRAMEIVY++  L  Y+  AV+V  + PVL+D +L DAIE+D+D ++D
Sbjct: 709  YPLVVRPSYVLGGRAMEIVYSESELRRYMREAVQVSNDCPVLLDHFLDDAIEVDLDLVSD 768

Query: 867  SCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNC 926
               + VIGGI++HIEQAG+HSGDSAC +P  ++S+   +T+     ++A  L V GLMN 
Sbjct: 769  GRTS-VIGGILQHIEQAGIHSGDSACSLPPYSLSADLQETMREQARRMAAELGVVGLMNV 827

Query: 927  QYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPKH 986
            Q+A+  + DVY+LE NPRASRTVPF+SK IG  LAK AA  M G SL   GF KE++P +
Sbjct: 828  QFAVKKN-DVYVLEVNPRASRTVPFISKCIGISLAKIAARCMEGTSLEKQGFVKEIVPPY 886

Query: 987  VSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVFL 1046
              VKEAV PF KF G D +LGPEM+STGEVMG+   F  AF KA + AG+KLP  G  F+
Sbjct: 887  FCVKEAVFPFNKFPGVDPILGPEMKSTGEVMGVGDRFGEAFRKASLGAGEKLPKGGRAFI 946

Query: 1047 SLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVAN 1106
            S+ D  K    ++     ++GF +V+T GTA  L   GI V+ + K+ EGRPH  D + N
Sbjct: 947  SVRDGDKQVAIKVGNYLRELGFDLVATRGTAKILGDAGIEVQVINKVVEGRPHIVDAIKN 1006

Query: 1107 GQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTVTMTA 1166
            G+I +++ T+ G +    D   +RR  L  KV   TT++GALA   A++     TV    
Sbjct: 1007 GEISLIINTTEG-TQAIADSYAIRRTALQNKVAYTTTIAGALAICMALQDKAPETVRR-- 1063

Query: 1167 LQDF 1170
            LQD 
Sbjct: 1064 LQDL 1067


>gi|224371825|ref|YP_002605989.1| protein CarB2 [Desulfobacterium autotrophicum HRM2]
 gi|223694542|gb|ACN17825.1| CarB2 [Desulfobacterium autotrophicum HRM2]
          Length = 1074

 Score = 1270 bits (3287), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 626/1085 (57%), Positives = 807/1085 (74%), Gaps = 20/1085 (1%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD+ KILI+GAGPI+I Q CEFDYSGTQACKALKEEGYEVIL+NSNPATIMTDP  AD
Sbjct: 3    KRTDIHKILIIGAGPIIISQGCEFDYSGTQACKALKEEGYEVILVNSNPATIMTDPETAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
            RTYI P+TPE + +++EKERPDALLPT+GGQT LN AV  A  G LE+Y VE+IGA L+A
Sbjct: 63   RTYIEPVTPETLAKIIEKERPDALLPTLGGQTGLNTAVEAANMGVLERYNVEMIGASLEA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR+LF+ AM  IG++ P SG  + + E  +I+  IG FP+I+RP+FTLGGTGGG+
Sbjct: 123  INKAEDRELFRDAMNKIGLRIPESGFAHNMAEVETISARIG-FPIIVRPSFTLGGTGGGV 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN EE   + K+GL AS+ +QV++E+S+LGWKEYELEVMRD A NVVI+CSIEN+D MG
Sbjct: 182  AYNPEELADLAKSGLDASMITQVMLEESVLGWKEYELEVMRDHAGNVVIVCSIENIDAMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDS+TVAPAQTL+DKEYQ LRD SIAI++EIGV+ GGSNVQFA+NP +GE++++EMN
Sbjct: 242  VHTGDSLTVAPAQTLSDKEYQVLRDASIAIMQEIGVDTGGSNVQFAINPENGEMIIVEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRF 447
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD+I NDIT +T A FEPSIDY V KIPR+
Sbjct: 302  PRVSRSSALASKATGFPIAKIAAKLAVGYTLDEITNDITGETLACFEPSIDYCVVKIPRW 361

Query: 448  AFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKEL--DWD 505
             FEKFP +E +L+T MKSVGE M++GRTF+E+FQK LRSLE G  G+G            
Sbjct: 362  TFEKFPETEDILSTAMKSVGETMSIGRTFKEAFQKGLRSLEIGRFGFGADGKDPAPGSIS 421

Query: 506  WEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQS 565
              +L+Y L  PN  R+  I  A++ GM ++ I+ L+ ID WFL Q K+L++ ++  +T +
Sbjct: 422  RTELEYKLATPNSQRIFFIRHALENGMDIETINALTSIDPWFLFQMKQLVEFDK-TITLA 480

Query: 566  VSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANT 625
               + K+   + KR G+SD+Q+A  T ++E+++  +R  LG++P YK VDTCAAEF A T
Sbjct: 481  GRELPKEMLKKAKRWGYSDRQLAHLTGNSEEKIERQRKRLGIVPVYKLVDTCAAEFRAAT 540

Query: 626  PYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNS 685
            PY YS+Y+ ECE+  + +KKV+ILGGGPNRIGQGIEFDYCC H SF+L+  G E+IM+NS
Sbjct: 541  PYYYSTYEEECEARVSDRKKVIILGGGPNRIGQGIEFDYCCVHASFALREEGVESIMVNS 600

Query: 686  NPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEH 745
            NPETVSTDYDTSD+LYFEPLT EDVL++++ E+P G+IVQFGGQTPL L++ + +     
Sbjct: 601  NPETVSTDYDTSDKLYFEPLTREDVLHIVEKEKPFGVIVQFGGQTPLNLAMDLER----- 655

Query: 746  RLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEI 805
                      V I GTSPDSID AEDR+RF  ++ +L I QP  GIA +  +A A+A++I
Sbjct: 656  --------AGVPIIGTSPDSIDRAEDRDRFQEMLDKLGIAQPANGIAVNIEEAYAVAEKI 707

Query: 806  GYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALA 865
            GYPV+VRPS+VLGGRAM+IVY    L  Y   AV   P+ PVLID++L DA E+DVDA++
Sbjct: 708  GYPVMVRPSFVLGGRAMKIVYDRSALEEYFNLAVLASPDHPVLIDQFLEDAFELDVDAIS 767

Query: 866  DSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMN 925
            D   N VIGG+MEHIE+AG+HSGDSAC++P  +IS   +D ++     LAK L V GLMN
Sbjct: 768  DG-ENTVIGGMMEHIEEAGIHSGDSACVLPPYSISKVHIDEMTEAAKALAKELKVKGLMN 826

Query: 926  CQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPK 985
             Q+ I     VY++E NPRASRT+PFVSKA G PLAK A  VM GK+L +LG T++ IP 
Sbjct: 827  IQFGIMDD-KVYVIEVNPRASRTIPFVSKATGVPLAKLATKVMLGKTLAELGLTEQKIPA 885

Query: 986  HVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVF 1045
            H SVKEAV+PF++F   D +LGPEM+STGEVMGIDM    A AKAQ+ AGQ LP  GTVF
Sbjct: 886  HFSVKEAVMPFDRFSKVDPVLGPEMKSTGEVMGIDMDLGAAVAKAQLGAGQNLPTQGTVF 945

Query: 1046 LSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVA 1105
            +S+ D  K     +AK F D+GF +++T GTA FL    I  + + K+  GRP+  D + 
Sbjct: 946  ISVQDSDKNAALSVAKDFYDMGFTLIATRGTAMFLGENSIPAKVIEKVSTGRPNVVDAIK 1005

Query: 1106 NGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTVTMT 1165
            N +IQ +++ +   S  + DG  +RR  + YKVP  TT  G  A  +AI++LK  ++T+ 
Sbjct: 1006 NKEIQ-LILNTGASSQTKADGYAIRRSAIRYKVPYATTTDGTRAICKAIQALKRESLTVK 1064

Query: 1166 ALQDF 1170
            A+Q++
Sbjct: 1065 AIQEY 1069


>gi|302037857|ref|YP_003798179.1| carbamoyl-phosphate synthase large subunit [Candidatus Nitrospira
            defluvii]
 gi|300605921|emb|CBK42254.1| Carbamoyl-phosphate synthase, large subunit [Candidatus Nitrospira
            defluvii]
          Length = 1089

 Score = 1270 bits (3287), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 651/1104 (58%), Positives = 801/1104 (72%), Gaps = 34/1104 (3%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            +RTD+R IL++G+GPIVIGQACEFDYSGTQACKALKEEGY VILINSNPATIMTDP  AD
Sbjct: 3    RRTDIRSILLIGSGPIVIGQACEFDYSGTQACKALKEEGYRVILINSNPATIMTDPDFAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
            RTYI P+T ++VE+V+E ERPDALLPTMGGQTALN A+ LA+ G LEKYGV LIGA + A
Sbjct: 63   RTYIEPITLDVVEKVIECERPDALLPTMGGQTALNTAIGLAKRGVLEKYGVRLIGASIAA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDRD F+QAM  IG++ P SG+  +L E       I  FP I+RP+FT+GGTGG I
Sbjct: 123  IHKAEDRDAFRQAMWKIGLRVPDSGVATSLAEAERELERI-RFPAIVRPSFTMGGTGGNI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN EEF    + GL+ S   QVL+E+S++GWKE+ELEVMRDL DNVVIIC IEN+DPMG
Sbjct: 182  AYNIEEFRTQVEWGLSMSPVRQVLIEQSVIGWKEFELEVMRDLKDNVVIICPIENLDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPA TLTDKEYQ LRD ++ IIREIGV+ GG+N+QF +NPV+GE++VIEMN
Sbjct: 242  VHTGDSITVAPALTLTDKEYQMLRDAAVRIIREIGVDTGGANIQFGLNPVNGEMVVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRF 447
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD+I NDIT  T ASFEP+IDYVV KIPRF
Sbjct: 302  PRVSRSSALASKATGFPIAKIAAKLAVGYTLDEITNDITGVTKASFEPTIDYVVVKIPRF 361

Query: 448  AFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLEC---GFS---GWGCSNVKE 501
            AF+KFPG++P LTTQMKSVGE MA+GRTF+ES QKA+RS+E    GFS   G   +    
Sbjct: 362  AFQKFPGADPTLTTQMKSVGEVMAIGRTFKESLQKAIRSMEVDQFGFSSKMGLDLAVPPG 421

Query: 502  LDWD--WEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQ 559
            LD +   EQ++ ++R P PDR+  +   M+ GM   E+  L+ ID WFL Q +ELID E 
Sbjct: 422  LDREDAMEQVRKAVRTPLPDRLWRLADGMRLGMPNQELFALTKIDPWFLQQIRELIDFEA 481

Query: 560  FLLTQSV----SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSL--GVIP---S 610
             L+ +      + +  D   E K  GFSD ++A      ++ VR  RL+L  G  P   +
Sbjct: 482  RLVAERATLGPTGLQPDLLIEAKELGFSDPRLAQLLGVEQQTVRGWRLALSQGAQPRSVT 541

Query: 611  YKRVDTCAAEFEANTPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTS 670
            YKRVDTCAAEFEA+TPY+YS+Y+ ECE+ PT KKKV+ILGGGPNRIGQGIEFDYCC H +
Sbjct: 542  YKRVDTCAAEFEAHTPYLYSTYERECEARPTDKKKVVILGGGPNRIGQGIEFDYCCVHAA 601

Query: 671  FSLQSAGYETIMMNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQT 730
             +L+    ETIM+N NPETVSTDYDTSDRLYFEPLT EDVLN+++ E+P G+++QFGGQT
Sbjct: 602  MALREEQIETIMVNCNPETVSTDYDTSDRLYFEPLTEEDVLNIVEREQPMGVVLQFGGQT 661

Query: 731  PLKLSLPIHQYLDEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGG 790
            PLKL+L +          S +G   VRI GTSPD+ID AEDR RF  ++ +L + Q + G
Sbjct: 662  PLKLALSL----------SRAG---VRILGTSPDAIDRAEDRARFRELLDKLGLRQAESG 708

Query: 791  IAKSEADALAIAKEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLID 850
            +A S  +AL IA EI YPV+VRPSYVLGGR+M+IVY +  L+ Y+  AV+   + PVLID
Sbjct: 709  MAHSVEEALTIAAEITYPVMVRPSYVLGGRSMQIVYDEAGLLHYMNTAVKASEKHPVLID 768

Query: 851  KYLSDAIEIDVDALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSW 910
            KYL DAIEID DA++D    VV+ GIMEHIE+AGVHSGDSAC +P  T+ ++ ++ I   
Sbjct: 769  KYLRDAIEIDADAISDGT-TVVVAGIMEHIEEAGVHSGDSACSLPPYTLDATIIEEIRRQ 827

Query: 911  TIKLAKRLNVCGLMNCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSG 970
               LA  L V GLMN Q+A+     +Y+LE NPR SRTVPFVSKAIG PLAK A  VM G
Sbjct: 828  MTALALELGVIGLMNAQFAVKDQ-TIYVLEVNPRGSRTVPFVSKAIGVPLAKLAMKVMVG 886

Query: 971  KSLNDLGFTKEVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKA 1030
            KSL  L FT    P H+SVKEAV PF KF G DVLLGPEM+STGEVMGID  F  AF K+
Sbjct: 887  KSLQQLHFTTAPTPAHLSVKEAVFPFTKFAGVDVLLGPEMKSTGEVMGIDSDFGWAFVKS 946

Query: 1031 QIAAGQKLPLSGTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERV 1090
            Q  AG  LP SGT FLS+    +     +A+  + +GF+I +TSGTA +L  +G+ V+ V
Sbjct: 947  QAGAGAILPTSGTAFLSVKSEDRAGAFDVARRLVALGFRITATSGTALYLSEQGMCVDVV 1006

Query: 1091 LKMHEGRPHAGDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALAN 1150
             K+ EGRPH  D + NG++ ++V T    S  Q D L +RR  L   VP  TT+ GALA 
Sbjct: 1007 NKVQEGRPHIVDHIKNGEVALVVNTVRTASA-QTDSLSIRREALHKGVPYYTTMRGALAA 1065

Query: 1151 AEAIRSLKSNTVTMTALQDFFDVE 1174
               I +L    + + ALQ++  V 
Sbjct: 1066 VMGIEALLKKGLAIRALQEYHRVH 1089


>gi|33595902|ref|NP_883545.1| carbamoyl phosphate synthase large subunit [Bordetella parapertussis
            12822]
 gi|33565981|emb|CAE36532.1| carbamoyl-phosphate synthase large chain [Bordetella parapertussis]
          Length = 1080

 Score = 1270 bits (3287), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 643/1078 (59%), Positives = 813/1078 (75%), Gaps = 27/1078 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTDL+ ILI+GAGPI+IGQACEFDYSG QACKALK EGY  IL+NSNPATIMTDP  AD
Sbjct: 3    KRTDLKSILIIGAGPIIIGQACEFDYSGAQACKALKAEGYRTILVNSNPATIMTDPETAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+T + VE+++E+E+PDALLPTMGGQTALN A+ LA  G L+K+ VELIGA   A
Sbjct: 63   VTYIEPITWQAVEKIIEREKPDALLPTMGGQTALNCALDLAHHGVLKKHNVELIGANEHA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECIS----IANEIGE--FPLIIRPAFTLG 261
            I+KAEDR  FKQAM  IG+++  SG+ +++DE       IA +IG   FP++IRP+FTLG
Sbjct: 123  IEKAEDRQKFKQAMTDIGLESAKSGVAHSMDEAWEVQRRIAADIGTAGFPVVIRPSFTLG 182

Query: 262  GTGGGIAYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIE 321
            G+GGGIAYN EEFE IC+ GL AS T ++L+E+SLLGWKE+E+EV+RD ADN +I+CSIE
Sbjct: 183  GSGGGIAYNAEEFEVICRRGLEASPTKELLIEESLLGWKEFEMEVVRDKADNCIIVCSIE 242

Query: 322  NVDPMGVHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEV 381
            N+DPMGVHTGDSITVAPAQTLTDKEYQ +R+ SIA++REIGV+ GGSNVQFAVNP +G +
Sbjct: 243  NLDPMGVHTGDSITVAPAQTLTDKEYQIMRNASIAVLREIGVDTGGSNVQFAVNPQNGRM 302

Query: 382  MVIEMNPRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITK-KTPASFEPSIDYV 440
            +VIEMNPRVSRSSALASKATGFPIAK+AA+L+VGY+LD++ N+IT   TPASFEP+IDYV
Sbjct: 303  IVIEMNPRVSRSSALASKATGFPIAKVAARLAVGYTLDELRNEITGGATPASFEPTIDYV 362

Query: 441  VTKIPRFAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVK 500
            VTK+PRFAFEKFP ++  LTTQMKSVGE MA+GRTFQESFQKALR LE G  G     + 
Sbjct: 363  VTKVPRFAFEKFPQADARLTTQMKSVGEVMAMGRTFQESFQKALRGLEVGVDG-----LN 417

Query: 501  ELDWDWEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQF 560
            +   D E+L+  L  P P+R+  +  A  +G  +DE+H L+ ID WFL Q KE++D+E  
Sbjct: 418  QKTTDREKLQIELGEPGPERIWYVGDAFAQGFTLDEVHGLTRIDPWFLAQIKEIVDIELA 477

Query: 561  LLTQSVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAE 620
            L  ++++++     +E+KR GFSD+++AF   S+E EVR+ R  L V P YKRVDTCAAE
Sbjct: 478  LEQKTLADLDYAILWELKRCGFSDRRLAFLLDSSESEVRKLRHQLNVRPVYKRVDTCAAE 537

Query: 621  FEANTPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYET 680
            F  NT YMYS+Y+ ECES PT +KK+++LGGGPNRIGQGIEFDYCC H + +L+  GYET
Sbjct: 538  FATNTAYMYSTYEEECESQPTDRKKIIVLGGGPNRIGQGIEFDYCCVHAALALREDGYET 597

Query: 681  IMMNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQ 740
            IM+N NPETVSTDYDTSDRLYFEPLT+EDVL ++  E P G+IVQ+GGQTPLKL+     
Sbjct: 598  IMVNCNPETVSTDYDTSDRLYFEPLTLEDVLEIVHKENPVGMIVQYGGQTPLKLA----- 652

Query: 741  YLDEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALA 800
                 R   A+G   V I GTSP+SID AEDRERF  ++ +L + QP    A++EA+ALA
Sbjct: 653  -----RALEANG---VPIIGTSPESIDVAEDRERFQKLLNKLGLRQPPNRTARTEAEALA 704

Query: 801  IAKEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEID 860
             A EIGYP+VVRPSYVLGGRAMEIV+  + L  Y+  AV+V  + PVL+D++L+DA E+D
Sbjct: 705  HASEIGYPLVVRPSYVLGGRAMEIVHEQQDLERYMREAVKVSNDSPVLLDRFLNDATEVD 764

Query: 861  VDALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNV 920
            VD LAD    V IGG+MEHIEQAGVHSGDSAC +P  ++S+  +  I   T  +AK LNV
Sbjct: 765  VDCLADG-QTVFIGGVMEHIEQAGVHSGDSACSLPPYSLSAEVIAEIKRQTTMMAKALNV 823

Query: 921  CGLMNCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTK 980
             GLMN Q+AI   GDVY+LE NPRASRTVP+VSKA G  LAK AA  M+G++L D G T+
Sbjct: 824  SGLMNVQFAI-QGGDVYVLEVNPRASRTVPYVSKATGLQLAKIAARAMAGRTLADQGITR 882

Query: 981  EVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPL 1040
            EV+P + SVKEAV PF KF G D +LGPEM+STGEVMG+  SF  AF K+Q+AAG +LP 
Sbjct: 883  EVVPPYFSVKEAVFPFVKFPGVDTILGPEMKSTGEVMGVGNSFGEAFVKSQLAAGVRLPD 942

Query: 1041 SGTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHA 1100
            SGTVF+S+ +  KP    +A+   ++GFK+V+T GTA  +E  GI V+ V K+ EGRPH 
Sbjct: 943  SGTVFISVRNQDKPRAVEVARGLHNLGFKLVATRGTAAEIEAAGIPVQVVNKVTEGRPHI 1002

Query: 1101 GDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLK 1158
             DMV NG++ +++ T         D   +R + LA ++   TT++G  A  E ++ ++
Sbjct: 1003 VDMVKNGEVSLVINTVEERRNAIADSRTIRTQALANRITFFTTIAGVRAAVEGMQFMR 1060


>gi|404493234|ref|YP_006717340.1| carbamyl-phosphate synthase, large subunit lipoprotein,
            glutamine-dependent [Pelobacter carbinolicus DSM 2380]
 gi|77545294|gb|ABA88856.1| carbamyl-phosphate synthase, large subunit lipoprotein,
            glutamine-dependent [Pelobacter carbinolicus DSM 2380]
          Length = 1084

 Score = 1269 bits (3285), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 653/1097 (59%), Positives = 817/1097 (74%), Gaps = 31/1097 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++KILI+GAGPI+IGQACEFDYSGTQACKALKEEGY VIL+NSNPATIMTDP  AD
Sbjct: 3    KRTDIQKILIIGAGPIIIGQACEFDYSGTQACKALKEEGYTVILLNSNPATIMTDPETAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
            RTY+ P+TPE++E+++E ERPDA+LPT+GGQTALN AVA A++G LE+YGVELIGA L A
Sbjct: 63   RTYVEPVTPEVLEKIIEAERPDAILPTLGGQTALNTAVAAAQNGVLERYGVELIGASLPA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I+KAEDR LFK+AM  IGV  P SG+ ++ +E + I   +G +P IIRP+FTLGGTGGGI
Sbjct: 123  IEKAEDRTLFKEAMAKIGVAVPRSGLAHSYEEAMKIIEYVG-YPAIIRPSFTLGGTGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EE+EA+   G+ AS T ++LVE+S++GWKE+ELEVMRD ADNVVIICSIEN D MG
Sbjct: 182  AYNREEYEALALGGIDASPTDEILVEESIIGWKEFELEVMRDKADNVVIICSIENFDAMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTL+DKEYQ LRD SI IIREIGV+ GGSN+QFA+NPVDG + VIEMN
Sbjct: 242  VHTGDSITVAPAQTLSDKEYQLLRDASIKIIREIGVDTGGSNIQFAINPVDGRLAVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRF 447
            PRVSRSSALASKATGFPIAK+AAKLSVGY+LD+IPNDIT++T ASFEP+IDYVVTKIPRF
Sbjct: 302  PRVSRSSALASKATGFPIAKIAAKLSVGYTLDEIPNDITQETFASFEPTIDYVVTKIPRF 361

Query: 448  AFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW- 506
             FEKFP ++  LTTQMKSVGEAM++GRTF+ES QK LRS+E G  G+  S +     +W 
Sbjct: 362  TFEKFPQADSTLTTQMKSVGEAMSIGRTFKESLQKGLRSMEIGSYGFE-SRLYNSPAEWG 420

Query: 507  --------EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVE 558
                    E L   L VPN +R+  +  A + GM + +I+  + ID WFL Q +++I++E
Sbjct: 421  SPLDDAARELLNTKLHVPNWERIWYVADAFRAGMDIPQIYTATGIDPWFLFQIQQIIEME 480

Query: 559  QFL--LTQSVSNMTK--DDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRV 614
            + L  L +  +  T+  +   E K+ GFSD+++A     TE EVR+ RL + + P YKRV
Sbjct: 481  EQLVKLVELPATATEWPELLREAKQNGFSDRRLAQLWGKTEDEVRQLRLDMNIHPVYKRV 540

Query: 615  DTCAAEFEANTPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQ 674
            DTC AEF A+TPY+YS+Y+ ECE+ PT +KK++ILGGGPNRIGQGIEFDYCC H   +L 
Sbjct: 541  DTCGAEFIAHTPYLYSTYETECEAMPTDRKKIMILGGGPNRIGQGIEFDYCCVHGVMALA 600

Query: 675  SAGYETIMMNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKL 734
              GYETIM+N NPETVSTDYDTSDRLYFEPLT EDVL ++ +E+P G+IVQFGGQTPLKL
Sbjct: 601  EDGYETIMVNCNPETVSTDYDTSDRLYFEPLTFEDVLEIVHIEKPVGVIVQFGGQTPLKL 660

Query: 735  SLPIHQYLDEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKS 794
            ++ + +               V I GTSPD+ID AEDRERF A++ +L++ QP  G+A+S
Sbjct: 661  AVSLEK-------------AGVPIIGTSPDAIDRAEDRERFQALLFKLNLLQPDNGLARS 707

Query: 795  EADALAIAKEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLS 854
              +A  IA+ IGYPVVVRPSYVLGGRAMEIVY  + L  Y++NAV+  P+ P+LIDK+L 
Sbjct: 708  FDEAEKIAERIGYPVVVRPSYVLGGRAMEIVYHVDALRNYMQNAVQASPDHPILIDKFLE 767

Query: 855  DAIEIDVDALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKL 914
             AIE+DVDAL D   +VVIGGIM+HIE+AG+HSGDSAC +P  ++    +D I   T +L
Sbjct: 768  HAIEVDVDALCDG-KSVVIGGIMQHIEEAGIHSGDSACALPPFSLKPEIVDEIRRQTREL 826

Query: 915  AKRLNVCGLMNCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLN 974
            A  L V GLMN QYA+     +YLLE NPRASRTVPFVSKA   PLAK AA VM+GK+L 
Sbjct: 827  ALELGVVGLMNIQYAVKED-TIYLLEVNPRASRTVPFVSKATNRPLAKLAARVMAGKTLE 885

Query: 975  DLGFTKEVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAA 1034
            DL    E+IP ++SVKEAV PF KF G D LLGPEM+STGEVMGID +   AFAKAQ+AA
Sbjct: 886  DLQVHDEIIPSYISVKEAVFPFVKFPGVDTLLGPEMKSTGEVMGIDTNLYRAFAKAQLAA 945

Query: 1035 GQKLPLSGTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMH 1094
            G  LP+ G VF+SL D  K      A+  ++ GF +V+T GTA FLE  G+ V  + K+ 
Sbjct: 946  GVILPVKGKVFISLKDGDKQTFLEPARRLVEGGFSLVATRGTASFLEANGLPVTAINKVK 1005

Query: 1095 EGRPHAGDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAI 1154
            EGRPH  D + + +I M+  T+ G      D   +RR  L Y +   TT+ G +A  +A+
Sbjct: 1006 EGRPHCVDALKSKEIDMVFNTTFGPQ-SVSDSYSIRRTALMYNIAYYTTLEGIIAAVDAV 1064

Query: 1155 RSLKSNTVTMTALQDFF 1171
             SL    + +  LQ+++
Sbjct: 1065 LSLGREKLDVVPLQEYY 1081


>gi|319787363|ref|YP_004146838.1| carbamoyl-phosphate synthase, large subunit [Pseudoxanthomonas
            suwonensis 11-1]
 gi|317465875|gb|ADV27607.1| carbamoyl-phosphate synthase, large subunit [Pseudoxanthomonas
            suwonensis 11-1]
          Length = 1080

 Score = 1269 bits (3284), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 624/1068 (58%), Positives = 806/1068 (75%), Gaps = 21/1068 (1%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KR+D++ ILI+GAGPIVIGQACEFDYSG QACKAL+EEGY V+L+NSNPATIMTDP  AD
Sbjct: 3    KRSDIKTILIIGAGPIVIGQACEFDYSGAQACKALREEGYRVVLVNSNPATIMTDPDTAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
              YI P+  + VE+++ KE+PDALLPTMGGQTALN A+ LA++G LEKY VELIGAK +A
Sbjct: 63   AVYIEPINWQTVEKIIAKEKPDALLPTMGGQTALNCALDLADNGVLEKYNVELIGAKREA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I+ AEDR+LF+ AM+ IG++ P + +  + ++ + I  ++G +P IIRP+FTLGG+GGGI
Sbjct: 123  IRMAEDRELFRVAMQEIGLECPKAEVARSFEQAVEIQAKVG-YPTIIRPSFTLGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEFE I K GL  S   +VLVE+S+LGWKE+E+EV+RD ADN +I+CSIEN+DPMG
Sbjct: 182  AYNREEFEEIVKRGLELSPVHEVLVEESVLGWKEFEMEVVRDTADNCIIVCSIENLDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQRLRD SIA++R+IGV+ GGSNVQF +N   G V+VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQRLRDASIAVLRKIGVDTGGSNVQFGINAQTGRVVVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ N+IT  KTPASFEP+IDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGYTLDELKNEITGGKTPASFEPAIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELD-WD 505
            FAFEKFP ++  LTTQMKSVGE MA+GRTF+ES QKALR LE G  G+  + +   D  D
Sbjct: 362  FAFEKFPQADSRLTTQMKSVGEVMAMGRTFRESVQKALRGLETGKVGFDPTGLDLADEED 421

Query: 506  WEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQS 565
               L+  L+ P P+R+  +  A + GM V+EIH LSFID WFL Q +E+I  E+ +  + 
Sbjct: 422  LATLRRELKAPGPERLFYVADAFRAGMGVEEIHALSFIDPWFLDQIEEIIQEEKRVAAEG 481

Query: 566  VSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANT 625
            ++++      ++KR GFSD ++A    + E  +R  R +  V P YKRVD+CAAEF  +T
Sbjct: 482  LASLDAARLRKLKRDGFSDARMAQLAGTNEAAIRALRRAHKVRPVYKRVDSCAAEFATST 541

Query: 626  PYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNS 685
             Y+YS+Y+ ECE+ P+ ++K++ILGGGPNRIGQGIEFDYCC H + +L+  GYETIM+N 
Sbjct: 542  AYLYSTYEDECEANPSDREKIMILGGGPNRIGQGIEFDYCCVHAALALREDGYETIMVNC 601

Query: 686  NPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEH 745
            NPETVSTDYDTSDRLYFEPLT+EDVL +++LE+P+G+IVQ+GGQTPLKL+          
Sbjct: 602  NPETVSTDYDTSDRLYFEPLTLEDVLEIVELEQPKGVIVQYGGQTPLKLA---------- 651

Query: 746  RLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEI 805
            R   A+G   V + GTSPDSID AEDRERF  ++++L ++QP    A++  +ALA+A+EI
Sbjct: 652  RALEANG---VPVIGTSPDSIDLAEDRERFQQLVEKLGLKQPPNRTARTADEALALAREI 708

Query: 806  GYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALA 865
            GYP+VVRPSYVLGGRAMEIVY +  L  Y+ +AV+V  + PVL+D++L +A+E+DVD +A
Sbjct: 709  GYPLVVRPSYVLGGRAMEIVYGESDLARYVRDAVKVSNDSPVLLDRFLDNAVEVDVDLIA 768

Query: 866  DSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMN 925
            D+ GN +IGG+MEHIE+AGVHSGDS+C +P  ++S +    +    ++LAK LNV GLMN
Sbjct: 769  DAEGNTLIGGVMEHIEEAGVHSGDSSCSLPPYSLSQATQAELRRQVVELAKGLNVVGLMN 828

Query: 926  CQYAITTSGD----VYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKE 981
             Q+AI T+ +    VYLLE NPRASRTVPFVSKA G  LAK AA  M+G+SL + G T+E
Sbjct: 829  TQFAIQTNEEGEDTVYLLEVNPRASRTVPFVSKATGVQLAKIAARCMAGRSLAEQGATRE 888

Query: 982  VIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLS 1041
            V+P + SVKEA+ PF KFQG D +LGPEMRSTGEVMG+  SF  A A+AQ A G + P  
Sbjct: 889  VVPAYYSVKEAIFPFAKFQGVDPILGPEMRSTGEVMGVGRSFGAAMARAQEAGGIRAPQP 948

Query: 1042 GTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAG 1101
            G  F+S+ D  K  +  +AKA ++ GF IV+T GTA +LE  G+A   + K+ EGRPH  
Sbjct: 949  GKAFVSVRDPDKKRVLPVAKALVERGFSIVATRGTAQWLEENGVACTVINKVAEGRPHIV 1008

Query: 1102 DMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALA 1149
            D + NG+I  +V T+ G +    D   +RR  L  +V   TTV+GA A
Sbjct: 1009 DSIKNGEIAYIVNTTEGRAAIS-DSFSIRREALQQRVTYSTTVAGAKA 1055



 Score =  249 bits (636), Expect = 7e-63,   Method: Compositional matrix adjust.
 Identities = 156/432 (36%), Positives = 239/432 (55%), Gaps = 24/432 (5%)

Query: 60  RVRASSAKIDS-SAELSNGAA----SSKDQKLGKRTDLRKILILGAGPIVIGQACEFDYS 114
           +VR    ++DS +AE +   A    + +D+     +D  KI+ILG GP  IGQ  EFDY 
Sbjct: 522 KVRPVYKRVDSCAAEFATSTAYLYSTYEDECEANPSDREKIMILGGGPNRIGQGIEFDYC 581

Query: 115 GTQACKALKEEGYEVILINSNPATIMTDPGLADRTYITPMTPELVEQVLEKERPDALLPT 174
              A  AL+E+GYE I++N NP T+ TD   +DR Y  P+T E V +++E E+P  ++  
Sbjct: 582 CVHAALALREDGYETIMVNCNPETVSTDYDTSDRLYFEPLTLEDVLEIVELEQPKGVIVQ 641

Query: 175 MGGQTALNLAVALAESGALEKYGVELIGAKLDAIKKAEDRDLFKQAMKTIGVKTPPSGIG 234
            GGQT L LA       ALE  GV +IG   D+I  AEDR+ F+Q ++ +G+K PP+   
Sbjct: 642 YGGQTPLKLA------RALEANGVPVIGTSPDSIDLAEDRERFQQLVEKLGLKQPPNRTA 695

Query: 235 NTLDECISIANEIGEFPLIIRPAFTLGGTGGGIAYNKEEFEAICKAGLAASLTSQVLVEK 294
            T DE +++A EIG +PL++RP++ LGG    I Y + +     +  +  S  S VL+++
Sbjct: 696 RTADEALALAREIG-YPLVVRPSYVLGGRAMEIVYGESDLARYVRDAVKVSNDSPVLLDR 754

Query: 295 SLLGWKEYELEVMRDLADNVVIICSIENVDPMGVHTGDSITVAPAQTLTDKEYQRLRDYS 354
            L    E +++++ D   N +I   +E+++  GVH+GDS    P  +L+      LR   
Sbjct: 755 FLDNAVEVDVDLIADAEGNTLIGGVMEHIEEAGVHSGDSSCSLPPYSLSQATQAELRRQV 814

Query: 355 IAIIREIGVECGGSNVQFAVNP-VDGE--VMVIEMNPRVSRSSALASKATGFPIAKMAAK 411
           + + + + V  G  N QFA+    +GE  V ++E+NPR SR+    SKATG  +AK+AA+
Sbjct: 815 VELAKGLNV-VGLMNTQFAIQTNEEGEDTVYLLEVNPRASRTVPFVSKATGVQLAKIAAR 873

Query: 412 LSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRFAFEKFPGSEPLLTTQMKSVGEAMA 471
              G SL         +  A+ E    Y   K   F F KF G +P+L  +M+S GE M 
Sbjct: 874 CMAGRSL--------AEQGATREVVPAYYSVKEAIFPFAKFQGVDPILGPEMRSTGEVMG 925

Query: 472 LGRTFQESFQKA 483
           +GR+F  +  +A
Sbjct: 926 VGRSFGAAMARA 937


>gi|297539178|ref|YP_003674947.1| carbamoyl-phosphate synthase large subunit [Methylotenera versatilis
            301]
 gi|297258525|gb|ADI30370.1| carbamoyl-phosphate synthase, large subunit [Methylotenera versatilis
            301]
          Length = 1068

 Score = 1269 bits (3283), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 630/1086 (58%), Positives = 808/1086 (74%), Gaps = 24/1086 (2%)

Query: 86   LGKRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGL 145
            + KRTD++ ILI+GAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +
Sbjct: 1    MAKRTDIKSILIIGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEM 60

Query: 146  ADRTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKL 205
            AD TYI P+T ++VE+++ KERPDALLPTMGGQTALN A+ L + G L KY VELIGA  
Sbjct: 61   ADATYIEPVTWQVVEKIIAKERPDALLPTMGGQTALNCALDLDKHGVLAKYKVELIGASK 120

Query: 206  DAIKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGG 265
            +AI KAEDR  FK+AM  IG+ +  S + ++++E + +   IG +P IIRP+FT+GG+GG
Sbjct: 121  EAIDKAEDRQKFKEAMTKIGLGSARSAVAHSMEEALQVQASIG-YPTIIRPSFTMGGSGG 179

Query: 266  GIAYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDP 325
            GIAYN+EEF +IC+ GL AS T+++L+E+SLLGWKEYE+EV+RD ADN +IICSIEN+DP
Sbjct: 180  GIAYNREEFISICERGLDASPTNELLIEESLLGWKEYEMEVVRDSADNCIIICSIENLDP 239

Query: 326  MGVHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIE 385
            MGVHTGDSITVAPAQTL+DKEYQ +R+ S+A++REIGV+ GGSNVQFA+NP DG ++VIE
Sbjct: 240  MGVHTGDSITVAPAQTLSDKEYQIMRNASLAVLREIGVDTGGSNVQFAINPDDGRMIVIE 299

Query: 386  MNPRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITK-KTPASFEPSIDYVVTKI 444
            MNPRVSRSSALASKATGFPIAK+AAKL+VG++LD++ N+IT   TPASFEPSIDYVVTKI
Sbjct: 300  MNPRVSRSSALASKATGFPIAKVAAKLAVGFTLDELRNEITGGATPASFEPSIDYVVTKI 359

Query: 445  PRFAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDW 504
            PRFAFEKFP ++  LTTQMKSVGE MA+GRTFQESFQKALR LE G  G     + E   
Sbjct: 360  PRFAFEKFPQADSRLTTQMKSVGEVMAIGRTFQESFQKALRGLEVGVDG-----LDEKTT 414

Query: 505  DWEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQ 564
            D + +   + VP P+R+  +  A + GM V+++  +S ID WFL Q K+LID EQ L  +
Sbjct: 415  DLDTITKEMGVPGPERIWYVGDAFRMGMSVEQVFNISKIDHWFLVQIKDLIDREQALKGK 474

Query: 565  SVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEAN 624
             ++++ K    ++KR GFSD+++A    + +  VR  R +L V P YKRVDTCAAEF  N
Sbjct: 475  QIADLDKQALLKLKRSGFSDRRLATLLNTDQHAVRAYRQALQVRPVYKRVDTCAAEFSTN 534

Query: 625  TPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMN 684
            T YMYS+Y+ ECE+APT KKK++ILGGGPNRIGQGIEFDYCC H +F+++  GYETIM+N
Sbjct: 535  TAYMYSTYEEECEAAPTNKKKIMILGGGPNRIGQGIEFDYCCVHAAFAMREDGYETIMVN 594

Query: 685  SNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDE 744
             NPETVSTDYDTSDRLYFEP+T+EDVL ++ LE+P G+IVQ+GGQTPLKL+    + L++
Sbjct: 595  CNPETVSTDYDTSDRLYFEPVTLEDVLEIVALEKPVGVIVQYGGQTPLKLA----RDLEK 650

Query: 745  HRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKE 804
              +P         I GT+PD+ID AEDRERF  +++EL ++QP    A++  +A+ +A E
Sbjct: 651  AGVP---------IIGTTPDAIDMAEDRERFQKMLQELGLKQPPNRTARTPDEAIRLALE 701

Query: 805  IGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDAL 864
            IGYP+VVRPSYVLGGRAMEIV     L  Y+  AV+V  E PVL+D++L+DA+E+DVDAL
Sbjct: 702  IGYPLVVRPSYVLGGRAMEIVQEQSQLERYMREAVKVSNESPVLLDRFLNDALEVDVDAL 761

Query: 865  ADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLM 924
             D+ G+V+IGGIMEH+EQAGVHSGDSAC +P  ++S+   D +   T ++A+ L V GLM
Sbjct: 762  CDNTGDVIIGGIMEHVEQAGVHSGDSACSLPPFSLSAKLQDELRDQTKQMARALGVVGLM 821

Query: 925  NCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIP 984
            N Q+AI     V++LE NPRASRTVPFVSKA G  LAK AA  M G SL   G T+E++P
Sbjct: 822  NVQFAIQGK-TVFVLEVNPRASRTVPFVSKACGLQLAKVAARCMIGTSLKAQGVTREIVP 880

Query: 985  KHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTV 1044
               SVKEAV PF KF G D +LGPEM+STGEVMG+  +F  AF K+Q+ A  KLP  G  
Sbjct: 881  PFYSVKEAVFPFIKFPGVDTILGPEMKSTGEVMGVGATFAEAFLKSQLGASTKLPEGGRA 940

Query: 1045 FLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMV 1104
            F+S+       +  IA A  D+GF++V+T GTA  L   G+ V  V K+ EGRPH  DM+
Sbjct: 941  FISVRKEDYNKVVEIAHALHDLGFELVATKGTATALTANGLKVASVNKVAEGRPHIVDMI 1000

Query: 1105 ANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTVTM 1164
             NG I  +V  +  D    +D  ++RR  L  KV   TT++GA A    +  ++   +T+
Sbjct: 1001 KNGDISFIVNVTE-DKRAVVDSYEIRRSALQNKVTYYTTLAGAKAACVGMAHMQE--LTV 1057

Query: 1165 TALQDF 1170
             +LQD 
Sbjct: 1058 ESLQDL 1063


>gi|264679350|ref|YP_003279257.1| carbamoyl-phosphate synthase, large subunit [Comamonas testosteroni
            CNB-2]
 gi|299532309|ref|ZP_07045702.1| carbamoyl-phosphate synthase, large subunit [Comamonas testosteroni
            S44]
 gi|262209863|gb|ACY33961.1| carbamoyl-phosphate synthase, large subunit [Comamonas testosteroni
            CNB-2]
 gi|298719717|gb|EFI60681.1| carbamoyl-phosphate synthase, large subunit [Comamonas testosteroni
            S44]
          Length = 1083

 Score = 1269 bits (3283), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 632/1084 (58%), Positives = 802/1084 (73%), Gaps = 30/1084 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KR DL+ ILI+GAGPIVIGQACEFDYSG QACKAL+EEGY+VILINSNPATIMTDP  AD
Sbjct: 3    KRNDLKSILIIGAGPIVIGQACEFDYSGVQACKALREEGYKVILINSNPATIMTDPATAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+T + VE+++ KERPDA+LPTMGGQTALN A+ L ++G L+KY VELIGAK +A
Sbjct: 63   VTYIEPITWQTVEKIIAKERPDAILPTMGGQTALNCALDLWKNGVLDKYKVELIGAKPEA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  FK AM  IG+ +  SGI +++DE  ++  ++G FP +IRP+FTLGGTGGGI
Sbjct: 123  IDKAEDRLKFKDAMTKIGLGSARSGIAHSMDEAWAVQKQMG-FPTVIRPSFTLGGTGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN EEFE ICK GL AS T+++L+E+SLLGWKEYE+EV+RD ADN +I+CSIEN+DPMG
Sbjct: 182  AYNPEEFETICKRGLEASPTNELLIEESLLGWKEYEMEVVRDTADNCIIVCSIENLDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGV+ GGSNVQF+VNP DG ++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQIMRNASLAVLREIGVDTGGSNVQFSVNPKDGRMIVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VG++LD++ N+IT  KTPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKIAAKLAVGFTLDELKNEITGGKTPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            FAFEKFP ++  LTTQMKSVGE MA+GRTFQESFQKALR LE G  G     + E   D 
Sbjct: 362  FAFEKFPAADNRLTTQMKSVGEVMAIGRTFQESFQKALRGLEVGVDG-----MNEKTQDR 416

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLT--- 563
            E L+  L  P PDR+  +  A   G  +DE+H ++ IDKWFL Q +E++ +E  L     
Sbjct: 417  EILEKELGEPGPDRIWYVGDAFAAGWSLDEVHNITKIDKWFLVQIEEIVKIELDLDKLYE 476

Query: 564  ----QSVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAA 619
                 +++ +       +K++GFSD+++A    +++K VRE R +L V P +KRVDTCAA
Sbjct: 477  AKGEGALAALDAQTLRTLKQKGFSDRRLAKLLHTSDKAVREARKALKVRPVFKRVDTCAA 536

Query: 620  EFEANTPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYE 679
            EF +NT YMYS+YD ECE+APT KKK+++LGGGPNRIGQGIEFDYCC H + +++  GYE
Sbjct: 537  EFASNTAYMYSTYDEECEAAPTDKKKIMVLGGGPNRIGQGIEFDYCCVHAAMAMREDGYE 596

Query: 680  TIMMNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIH 739
            TIM+N NPETVSTDYDTSDRLYFEPLT+EDVL ++D+E+PEG+IVQ+GGQTPLKL+L + 
Sbjct: 597  TIMVNCNPETVSTDYDTSDRLYFEPLTLEDVLEIVDVEQPEGVIVQYGGQTPLKLALGLE 656

Query: 740  QYLDEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADAL 799
            +            +G V+I GT+PD IDAAEDRERF  ++ EL + QP    A++EA+AL
Sbjct: 657  R------------EG-VKIIGTTPDMIDAAEDRERFQKLLNELGLRQPPNATARTEAEAL 703

Query: 800  AIAKEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEI 859
              A  +GYP+VVRPSYVLGGRAMEIV+    L  Y+  AV+V  + PVL+D +LS+AIE 
Sbjct: 704  EKAAGLGYPLVVRPSYVLGGRAMEIVHEQRDLERYMREAVKVSNDSPVLLDHFLSNAIEC 763

Query: 860  DVDALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLN 919
            DVD + D  G V IGG+MEHIEQAGVHSGDSAC +P   + +  +  I   T  +A+ L+
Sbjct: 764  DVDCVRDKTGAVYIGGVMEHIEQAGVHSGDSACSLPPYYLKAETVAEIKRQTAAMAEGLH 823

Query: 920  VCGLMNCQYAITTSGD---VYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDL 976
            V GLMN Q+AI  +     +Y+LE NPRASRTVPFVSKA G  LAK AA  M+G +L + 
Sbjct: 824  VVGLMNVQFAIKEADGQDVIYVLEVNPRASRTVPFVSKATGVQLAKVAARCMAGDTLAEQ 883

Query: 977  GFTKEVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQ 1036
            G TKEV P + SVKEAV PF KF G D +LGPEM+STGEVMG+  +F  AF K+Q+ AG 
Sbjct: 884  GITKEVTPPYFSVKEAVFPFVKFPGVDTILGPEMKSTGEVMGVGKTFGEAFVKSQMGAGV 943

Query: 1037 KLPLSGTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEG 1096
             LP  G VFLS+ +  K     +AK  + +G+ + +T GTA  +   G+ V+ V K+ EG
Sbjct: 944  HLPAEGKVFLSVKNNDKTRAVAVAKELVAMGYSLCATRGTAAAIAEAGLEVQAVNKVTEG 1003

Query: 1097 RPHAGDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRS 1156
            RPH  DM+ NG+I +++ T         D  ++R   L  +V   TT+ GA A  E +++
Sbjct: 1004 RPHIVDMIKNGEIALVINTVEERRNAIADSRQIRTSALLARVTTFTTIFGAEAAVEGMKA 1063

Query: 1157 LKSN 1160
            ++ N
Sbjct: 1064 MRGN 1067


>gi|225175359|ref|ZP_03729354.1| carbamoyl-phosphate synthase, large subunit [Dethiobacter
            alkaliphilus AHT 1]
 gi|225169111|gb|EEG77910.1| carbamoyl-phosphate synthase, large subunit [Dethiobacter
            alkaliphilus AHT 1]
          Length = 1086

 Score = 1268 bits (3281), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 623/1099 (56%), Positives = 798/1099 (72%), Gaps = 38/1099 (3%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD+ KIL++G+GPIVIGQACEFDYSGTQACKAL+EEGY+++L+NSNPATIMTDP +AD
Sbjct: 3    KRTDIEKILVIGSGPIVIGQACEFDYSGTQACKALREEGYKIVLVNSNPATIMTDPEMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
              YI P+  +++E +++KE+PDA+LPT+GGQTALNL V LAE G L+KY VELIGA +DA
Sbjct: 63   AVYIEPLNTDILEMIIDKEKPDAILPTIGGQTALNLTVELAEKGILDKYRVELIGAGIDA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            IKKAEDR+LF+ A++ +G+  P S   ++L E + +  EIG FP I+RPAFTLGGTGGGI
Sbjct: 123  IKKAEDRELFRAAIQKVGLDVPQSFAVSSLAEGLDVIGEIG-FPAILRPAFTLGGTGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN +E+  I + GL  S T QVLVE+S+LGWKE+ELEVMRD  DNVVIICSIEN DPMG
Sbjct: 182  AYNIQEYREILEKGLDLSPTKQVLVEESVLGWKEFELEVMRDKKDNVVIICSIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            +HTGDSITVAPAQTLTDKEYQR+RD +IAIIREIGV+ GGSN+QF ++P DG ++VIEMN
Sbjct: 242  IHTGDSITVAPAQTLTDKEYQRMRDAAIAIIREIGVDTGGSNIQFGISPQDGRLVVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRF 447
            PRVSRSSALASKATGFPIAK+AAKL+VG +LD+IPNDIT++TPASFEP IDYVV K PRF
Sbjct: 302  PRVSRSSALASKATGFPIAKIAAKLAVGLTLDEIPNDITRETPASFEPVIDYVVVKAPRF 361

Query: 448  AFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDWE 507
            AFEKFP ++  LTTQMKSVGEAMA+GRTF+E+  KA+RSLE       C   +  + D  
Sbjct: 362  AFEKFPEADATLTTQMKSVGEAMAIGRTFKEALNKAIRSLE-----LDCFGFERQEADMM 416

Query: 508  QLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQ----FLLT 563
             ++  L +PN +R+  I  A ++G+ ++EIHE++ ID WFL   ++++ +E     F   
Sbjct: 417  NIRSKLHIPNSERLLYIGEAFRRGLTIEEIHEITQIDPWFLYNIRQIVALEDKVACFADA 476

Query: 564  QSVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEA 623
                 +  +   + K  G SDK+I      +E  VR +R  LGV+P YK VDTCAAEF A
Sbjct: 477  GKTEALPPELLRKAKEYGLSDKRIGHLLGDSENAVRSRRKELGVLPVYKMVDTCAAEFRA 536

Query: 624  NTPYMYSSYDFE------------CESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSF 671
             TPY YS+Y+              CE+AP +++K++ILG GPNRIGQGIEFDYCC H   
Sbjct: 537  YTPYFYSTYEKPYRSAGAQKDVTVCEAAPGEREKIIILGSGPNRIGQGIEFDYCCVHAVM 596

Query: 672  SLQSAGYETIMMNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTP 731
            + +  GYE +M+N NPETVSTDYDT+DRLYFEPLT EDV+N+I+LE+P G+I+QFGGQTP
Sbjct: 597  ACRDLGYEAVMVNCNPETVSTDYDTADRLYFEPLTAEDVMNIIELEKPRGVILQFGGQTP 656

Query: 732  LKLSLPIHQYLDEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGI 791
            LKL++ + Q               V+I GTSPDS+D AEDR+RF  ++ +L ++QP+   
Sbjct: 657  LKLAMTLWQ-------------AGVKILGTSPDSVDRAEDRKRFKELLDKLELKQPESVT 703

Query: 792  AKSEADALAIAKEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDK 851
            A S  +ALA  + IGYPV+VRPSYVLGGRAMEI+Y+D+ L+ Y+  A+   PE PVLIDK
Sbjct: 704  AVSVEEALAAVQNIGYPVIVRPSYVLGGRAMEIIYSDDNLLDYMNRAMVASPEHPVLIDK 763

Query: 852  YLSDAIEIDVDALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWT 911
            YL  AIE+DVDA++D   N +I GIMEHIE+AG+HSGDSAC +P  +ISS  ++ I   T
Sbjct: 764  YLEGAIEVDVDAVSDGT-NTLIAGIMEHIEEAGIHSGDSACSLPPYSISSDIIEEIRVQT 822

Query: 912  IKLAKRLNVCGLMNCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGK 971
              LA  L VCGLMN QYA+  +GD+Y+LE NPRASRT+PFVSK  G P AK A  V+SG 
Sbjct: 823  KALATELGVCGLMNIQYAV-KNGDIYILEVNPRASRTIPFVSKVTGIPFAKLATRVISGH 881

Query: 972  SLNDLGFTKEVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQ 1031
            SL   G T EV   HV+VKEAV PF KF G DVLLGPEM+STGEVMGID  F +A+AK+Q
Sbjct: 882  SLAGQGITDEVQIPHVAVKEAVFPFNKFSGVDVLLGPEMKSTGEVMGIDDDFGLAYAKSQ 941

Query: 1032 IAAGQKLPLSGTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVL 1091
             A+   +P+SG +F+S+ D  K  +  IA     +G KIVST GTA +L   GI  + + 
Sbjct: 942  AASNNIIPISGRIFISVKDQDKQPIAAIAARLQALGMKIVSTRGTAKYLNELGITTDVIN 1001

Query: 1092 KMHEGRPHAGDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANA 1151
            K+ EGRPH  DM+ N ++  ++ T +G    + D L +RR  L Y+VP  TTV+GA A  
Sbjct: 1002 KVAEGRPHVVDMIKNREVDFVINTVAGARARK-DSLSIRRSALQYRVPYTTTVTGARAAV 1060

Query: 1152 EAIRSLKSNTVTMTALQDF 1170
             A+  L    + +  +Q++
Sbjct: 1061 TAMEMLSQKNINIKPIQEY 1079


>gi|333901779|ref|YP_004475652.1| carbamoyl-phosphate synthase large subunit [Pseudomonas fulva 12-X]
 gi|333117044|gb|AEF23558.1| carbamoyl-phosphate synthase, large subunit [Pseudomonas fulva 12-X]
          Length = 1073

 Score = 1268 bits (3281), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 634/1085 (58%), Positives = 804/1085 (74%), Gaps = 22/1085 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILILGAGPIVIGQACEFDYSG QACKAL+EEG+ VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGFRVILVNSNPATIMTDPAMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+    V +++EKERPDALLPTMGGQTALN A+ L   G LEK+GVE+IGA  D 
Sbjct: 63   ATYIEPIKWATVAKIIEKERPDALLPTMGGQTALNCALDLERHGVLEKFGVEMIGANADT 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  F +AMK IG+  P SGI ++++E   +  ++G FP IIRP+FT+GGTGGGI
Sbjct: 123  IDKAEDRSRFDKAMKDIGLACPVSGIAHSMEEAYGVLEKVG-FPCIIRPSFTMGGTGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEFE IC  GL  S T+++L+++SL+GWKEYE+EV+RD  DN +I+CSIEN DPMG
Sbjct: 182  AYNREEFEEICTRGLDLSPTNELLIDESLIGWKEYEMEVVRDKKDNCIIVCSIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ LR+ S+A++REIGVE GGSNVQF + P  G ++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQILRNASLAVLREIGVETGGSNVQFGICPNTGRMVVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT  +TPASFEP+IDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKIAAKLAVGYTLDELQNDITGGRTPASFEPAIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            FAFEKFP ++  LTTQMKSVGE MA+GRTFQES  KALR LE G SG+    +   D + 
Sbjct: 362  FAFEKFPNADARLTTQMKSVGEVMAIGRTFQESLHKALRGLEVGVSGFD-PKLDPADPEA 420

Query: 507  EQ-LKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQS 565
            E  LK  L VP  DR+  +  A + G  V+E+ EL+ ID+WFL Q ++LI  EQ + T  
Sbjct: 421  ESTLKRELIVPGADRIWYVADAFRAGKTVEEVFELTRIDEWFLVQIEDLIKDEQRIKTLG 480

Query: 566  VSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANT 625
            +S++ +D  + +KR+GFSD ++A     TEK +R  R  L V+P YKRVDTCAAEF  +T
Sbjct: 481  LSSIDRDLMFSLKRKGFSDARLAALLGVTEKNLRSHRHKLKVLPVYKRVDTCAAEFATDT 540

Query: 626  PYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNS 685
             YMYS+Y+ ECE+  + + K++ILGGGPNRIGQGIEFDYCC H + +++  GYETIM+N 
Sbjct: 541  AYMYSTYEEECEANASGRDKIMILGGGPNRIGQGIEFDYCCVHAALAMREDGYETIMVNC 600

Query: 686  NPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEH 745
            NPETVSTDYDTSDRLYFEP+T+EDVL ++ +E+P+G+IVQ+GGQTPLKL     + L+E 
Sbjct: 601  NPETVSTDYDTSDRLYFEPVTLEDVLEIVRVEQPKGVIVQYGGQTPLKLC----RALEEA 656

Query: 746  RLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEI 805
             +P         I GTSPD+ID AEDRERF  +++ L + QP    A+SE +AL ++K I
Sbjct: 657  GVP---------IIGTSPDAIDRAEDRERFQQMVQRLGLRQPANATARSEEEALTLSKNI 707

Query: 806  GYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALA 865
            GYP+VVRPSYVLGGRAMEIVY +E L  Y+  AV+V  + PVL+D++L+ AIE+DVDA++
Sbjct: 708  GYPMVVRPSYVLGGRAMEIVYQEEELKRYMREAVKVSNDSPVLLDRFLNCAIEVDVDAVS 767

Query: 866  DSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMN 925
            D    VVIG IM+HIEQAGVHSGDSAC +P  ++ +   D I     K+A  L V GLMN
Sbjct: 768  DG-EIVVIGAIMQHIEQAGVHSGDSACSLPPYSLPAHIQDEIRDQVKKMALELGVVGLMN 826

Query: 926  CQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPK 985
             Q A+    D+Y++E NPRASRTVPFVSK IG  LAK AA VM+GKSL +LGFT+E+IP 
Sbjct: 827  VQMAVQGE-DIYVIEVNPRASRTVPFVSKCIGESLAKVAARVMAGKSLAELGFTQEIIPP 885

Query: 986  HVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVF 1045
              SVKEAV PF KF G D +LGPEM+STGEVMG+  SF  AFAKAQ+ A + LP SG  F
Sbjct: 886  FFSVKEAVFPFNKFPGVDPILGPEMKSTGEVMGVGDSFGEAFAKAQLGASEILPNSGCAF 945

Query: 1046 LSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVA 1105
            +S+ +  KP   R+A+  + +GF++V+T+GTA  +E  G+ V RV K+ EGRPH  DM+ 
Sbjct: 946  ISVREDDKPEAVRVARDLVALGFEVVATAGTAKVIEAAGLPVRRVNKVTEGRPHVVDMIK 1005

Query: 1106 NGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTVTMT 1165
            N ++ +++ T+ G      D   +RR  L +K+   TT++   A  EA++     TV   
Sbjct: 1006 NDEVTLIINTTEGRQ-SIADSYSIRRNALQHKIYCTTTIAAGQAVCEALKFGPEKTVRR- 1063

Query: 1166 ALQDF 1170
             LQD 
Sbjct: 1064 -LQDL 1067


>gi|407008498|gb|EKE23860.1| hypothetical protein ACD_6C00311G0009 [uncultured bacterium]
          Length = 1076

 Score = 1268 bits (3280), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 629/1076 (58%), Positives = 796/1076 (73%), Gaps = 24/1076 (2%)

Query: 86   LGKRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGL 145
            + KRTD++ ILI+GAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +
Sbjct: 1    MAKRTDIKSILIIGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPTM 60

Query: 146  ADRTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKL 205
            AD TYI P+T + V  ++EKERPDA+LPTMGGQTALN A+AL E G LEKY VELIGA  
Sbjct: 61   ADATYIEPITWQTVAAIIEKERPDAVLPTMGGQTALNCALALDEHGILEKYNVELIGATK 120

Query: 206  DAIKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGG 265
            +AI+KAEDR LF QAM+ IG++ P + I  +++E + I    G FP+IIRP+FT+GG+GG
Sbjct: 121  EAIEKAEDRKLFDQAMRKIGLECPKADIAESMEEALEIQARFG-FPVIIRPSFTMGGSGG 179

Query: 266  GIAYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDP 325
            GIAYNKEEF  IC+ G   S T Q+L+++SL+GWKEYE+EV+RD  DN +I+C+IEN DP
Sbjct: 180  GIAYNKEEFIEICERGFDLSPTKQLLIDESLIGWKEYEMEVVRDKNDNCIIVCTIENFDP 239

Query: 326  MGVHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIE 385
            MGVHTGDSITVAPAQTLTDKE+Q LR+ S+A++REIGVE GGSNVQF +NP DG ++VIE
Sbjct: 240  MGVHTGDSITVAPAQTLTDKEFQLLRNASLAVLREIGVETGGSNVQFGINPKDGRMVVIE 299

Query: 386  MNPRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKI 444
            MNPRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT   TPASFEP+IDYVVTKI
Sbjct: 300  MNPRVSRSSALASKATGFPIAKIAAKLAVGYTLDELKNDITGGTTPASFEPAIDYVVTKI 359

Query: 445  PRFAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDW 504
            PRF FEKFP ++  LTTQMKSVGE MA+GR FQES QKALR LE G SG+        + 
Sbjct: 360  PRFNFEKFPQADATLTTQMKSVGEVMAIGRNFQESMQKALRGLEVGASGFDEKIEAGTEG 419

Query: 505  DWEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQ 564
              E++   L+VP P+R+  +  A + G  +DE+   + ID+WFL Q +++I  E  + T 
Sbjct: 420  AREKILQELKVPGPERIWYVGDAFRHGFTLDEVFAATNIDRWFLIQIEDIIKTENQIKTL 479

Query: 565  SVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEAN 624
               ++  D+    KR+G SD +IA     ++K+ R+ R +LGV P YKRVDTCAAEFE++
Sbjct: 480  GFGDLNADNIRAFKRKGLSDLRIANLMGISQKQFRKHRWNLGVTPVYKRVDTCAAEFESD 539

Query: 625  TPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMN 684
            T YMYS+YD ECE+ P+ + K++++GGGPNRIGQGIEFDYCC H + +++  GYETIM+N
Sbjct: 540  TAYMYSTYDEECEANPSTRDKIMVIGGGPNRIGQGIEFDYCCVHAALAMREDGYETIMVN 599

Query: 685  SNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDE 744
             NPETVSTDYDTSDRLYFEP+T+EDVL ++ +E+P+GIIVQ+GGQTPLKL+    + L+E
Sbjct: 600  CNPETVSTDYDTSDRLYFEPITLEDVLEIVRIEKPKGIIVQYGGQTPLKLA----RALEE 655

Query: 745  HRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKE 804
               P         I GTSPD+ID AEDRERF  +I+ L + QP   I KS  + +A A +
Sbjct: 656  AGAP---------IIGTSPDAIDRAEDRERFQQMIQRLQLRQPNNSIVKSAEEGMAEASK 706

Query: 805  IGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDAL 864
            +GYP+VVRPSYVLGGRAMEIVY DE L  YL +AV+   E PVL+D++L DAIE+DVD +
Sbjct: 707  VGYPLVVRPSYVLGGRAMEIVYNDEELKRYLRDAVQASNEAPVLLDRFLDDAIEVDVDCV 766

Query: 865  ADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLM 924
            +D   +VVIGGIM+HIEQAG+HSGDSAC IP  ++S    D +   TI +AK L V GLM
Sbjct: 767  SDG-KDVVIGGIMQHIEQAGIHSGDSACSIPPYSLSKEIQDEMRRQTIAMAKELGVIGLM 825

Query: 925  NCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIP 984
            N Q+A+    DVY+LE NPRASRTVPFVSK IG  LAK AA  M+G+SL   GFT E+IP
Sbjct: 826  NVQFAVKGE-DVYILEVNPRASRTVPFVSKCIGESLAKVAARCMAGQSLESQGFTSEIIP 884

Query: 985  KHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQK---LPLS 1041
            +H SVKEAV PF KF G D +LGPEM+STGEVMG+  +F  AF KA + A ++   LP  
Sbjct: 885  EHFSVKEAVFPFNKFPGVDPILGPEMKSTGEVMGVGKTFGEAFYKAVLGANERLPGLPTE 944

Query: 1042 GTV---FLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRP 1098
            G V   F+S+ D  KP    IAK  +D+GFKI++T GT   +   G+  ERV K+ EGRP
Sbjct: 945  GEVKHAFISVRDSDKPRAAGIAKQLIDLGFKILATDGTFKVISDAGLECERVNKVTEGRP 1004

Query: 1099 HAGDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAI 1154
            +  D + NG+I +++ T+ G    Q D   +RR  L  KV   TT++GA A  +A+
Sbjct: 1005 NIVDRIKNGEIHLVINTTEGKKA-QEDSFSIRRSALQGKVYNTTTLNGADAVCQAL 1059


>gi|407000339|gb|EKE17668.1| hypothetical protein ACD_10C00328G0001, partial [uncultured
            bacterium]
          Length = 1041

 Score = 1268 bits (3280), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 634/1060 (59%), Positives = 804/1060 (75%), Gaps = 22/1060 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ +LI+GAGPI+IGQACEFDYSG QACKAL+EEGY+VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIKSVLIIGAGPIIIGQACEFDYSGAQACKALREEGYKVILVNSNPATIMTDPEMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+T ++V +++E+ERPDALLPTMGGQTALN A+ L   G LEK+ VELIGA  +A
Sbjct: 63   VTYIEPITWKVVAKIIEQERPDALLPTMGGQTALNCALDLDREGILEKFNVELIGASKEA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  FK AM  IG+ +  S + ++++E   +   IG FP IIRP+FTLGG+GGGI
Sbjct: 123  IDKAEDRQKFKDAMTKIGLGSARSAVAHSMEEAYQVQAAIG-FPTIIRPSFTLGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN EEFE ICK GL AS T ++L+E+SLLGWKEYE+EV+RD ADN +I+CSIEN+DPMG
Sbjct: 182  AYNTEEFETICKRGLEASPTHELLIEESLLGWKEYEMEVVRDKADNCIIVCSIENLDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ LR+ SIA++REIGV+ GGSNVQF++NPVDG ++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQILRNASIAVLREIGVDTGGSNVQFSINPVDGRMIVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL++GY+LD++ NDIT  KTPASFEPSIDYVVTK+PR
Sbjct: 302  PRVSRSSALASKATGFPIAKIAAKLAIGYTLDELANDITGGKTPASFEPSIDYVVTKVPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            FAFEKFP ++  LTTQMKSVGE MA+GRTFQES QKALR LE G  G+   +V     D 
Sbjct: 362  FAFEKFPQADNTLTTQMKSVGEVMAIGRTFQESLQKALRGLEVGVDGFNLKSV-----DP 416

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
            E +   L  P PDR+  +  A   GM V+++ +L+ ID WFL Q KEL+D+E  +  +  
Sbjct: 417  ETIDEQLARPTPDRLWYVADAFGVGMSVEKVFDLTKIDPWFLVQIKELVDLELEIEKRDF 476

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
            S +T ++   +KR+GF+D+++A  TK++E  VRE R +LGV P YKRVDTCAAEF  +T 
Sbjct: 477  STLTAEELRFLKRKGFADRRLAHLTKTSETAVREARHALGVRPVYKRVDTCAAEFSTDTA 536

Query: 627  YMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSN 686
            YMYS+Y+ ECE+ PT KKK+++LGGGPNRIGQGIEFDYCC H + +++  GYETIM+N N
Sbjct: 537  YMYSTYEDECEAKPTDKKKIMVLGGGPNRIGQGIEFDYCCVHAAMAMREDGYETIMVNCN 596

Query: 687  PETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHR 746
            PETVSTDYDTSDRLYFEPLT+EDVL ++ +E+P G+IVQ+GGQTPLKL+L +        
Sbjct: 597  PETVSTDYDTSDRLYFEPLTLEDVLEIVAIEKPVGVIVQYGGQTPLKLALALE------- 649

Query: 747  LPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEIG 806
               A+G   V I GTSP+SID AEDRERF  ++ ++ ++QP    A++EADAL +A EIG
Sbjct: 650  ---ANG---VPIIGTSPESIDIAEDRERFQKLLHDIGLKQPPNRTARTEADALRLAVEIG 703

Query: 807  YPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALAD 866
            YP+VVRPSYVLGGRAMEIV+  + L  Y+  AV+V  + PVL+D++L+DA E+DVDAL+D
Sbjct: 704  YPLVVRPSYVLGGRAMEIVHEQKDLERYMREAVKVSHDSPVLLDRFLNDACEVDVDALSD 763

Query: 867  SCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNC 926
                V+IGG+MEHIEQAGVHSGDSAC +P  ++S++  D +   T  +AK LNVCGLMN 
Sbjct: 764  G-EEVIIGGVMEHIEQAGVHSGDSACSLPPYSLSAAVQDELRRQTKLMAKALNVCGLMNV 822

Query: 927  QYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPKH 986
            Q+AI     VY+LE NPRASRTVPFVSKA G  LAK AA  M+G+SL + G   E++P +
Sbjct: 823  QFAIKDE-IVYVLEVNPRASRTVPFVSKATGMQLAKIAARCMAGRSLKEQGVMGEIVPHY 881

Query: 987  VSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVFL 1046
             SVKEAV PF KF G D +LGPEM+STGEVMG+ ++F  AF K+Q+AA  KLP SG  FL
Sbjct: 882  FSVKEAVFPFAKFPGVDTILGPEMKSTGEVMGVGVTFAEAFVKSQLAASVKLPSSGKAFL 941

Query: 1047 SLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVAN 1106
            S+ D  K     IA+   + GF++V+T GTAH +E  G+ ++   K+ EGRPH  DM+ N
Sbjct: 942  SVKDSDKMKAVEIARHLHEAGFQLVATRGTAHAIEAAGLPIQVANKVTEGRPHIVDMIKN 1001

Query: 1107 GQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSG 1146
             +I +++ T     L   D   +R  GL  +V + TT+ G
Sbjct: 1002 NEIALIINTVEEKRLAINDSRSIRTSGLQARVTMYTTIWG 1041



 Score =  251 bits (641), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 168/487 (34%), Positives = 256/487 (52%), Gaps = 45/487 (9%)

Query: 61  VRASSAKIDS-SAELSNGAA----SSKDQKLGKRTDLRKILILGAGPIVIGQACEFDYSG 115
           VR    ++D+ +AE S   A    + +D+   K TD +KI++LG GP  IGQ  EFDY  
Sbjct: 517 VRPVYKRVDTCAAEFSTDTAYMYSTYEDECEAKPTDKKKIMVLGGGPNRIGQGIEFDYCC 576

Query: 116 TQACKALKEEGYEVILINSNPATIMTDPGLADRTYITPMTPELVEQVLEKERPDALLPTM 175
             A  A++E+GYE I++N NP T+ TD   +DR Y  P+T E V +++  E+P  ++   
Sbjct: 577 VHAAMAMREDGYETIMVNCNPETVSTDYDTSDRLYFEPLTLEDVLEIVAIEKPVGVIVQY 636

Query: 176 GGQTALNLAVALAESGALEKYGVELIGAKLDAIKKAEDRDLFKQAMKTIGVKTPPSGIGN 235
           GGQT L LA+      ALE  GV +IG   ++I  AEDR+ F++ +  IG+K PP+    
Sbjct: 637 GGQTPLKLAL------ALEANGVPIIGTSPESIDIAEDRERFQKLLHDIGLKQPPNRTAR 690

Query: 236 TLDECISIANEIGEFPLIIRPAFTLGGTGGGIAYNKEEFEAICKAGLAASLTSQVLVEKS 295
           T  + + +A EIG +PL++RP++ LGG    I + +++ E   +  +  S  S VL+++ 
Sbjct: 691 TEADALRLAVEIG-YPLVVRPSYVLGGRAMEIVHEQKDLERYMREAVKVSHDSPVLLDRF 749

Query: 296 LLGWKEYELEVMRDLADNVVIICSIENVDPMGVHTGDSITVAPAQTLTDKEYQRLRDYSI 355
           L    E +++ + D  + V+I   +E+++  GVH+GDS    P  +L+      LR  + 
Sbjct: 750 LNDACEVDVDALSD-GEEVIIGGVMEHIEQAGVHSGDSACSLPPYSLSAAVQDELRRQTK 808

Query: 356 AIIREIGVECGGSNVQFAVNPVDGEVMVIEMNPRVSRSSALASKATGFPIAKMAAKLSVG 415
            + + + V CG  NVQFA+   D  V V+E+NPR SR+    SKATG  +AK+AA+   G
Sbjct: 809 LMAKALNV-CGLMNVQFAIK--DEIVYVLEVNPRASRTVPFVSKATGMQLAKIAARCMAG 865

Query: 416 YSLDQIPNDITKKTPASFEPSIDYVVTKIPRFAFEKFPGSEPLLTTQMKSVGEAMALGRT 475
            SL        K+     E    Y   K   F F KFPG + +L  +MKS GE M +G T
Sbjct: 866 RSL--------KEQGVMGEIVPHYFSVKEAVFPFAKFPGVDTILGPEMKSTGEVMGVGVT 917

Query: 476 FQESFQKALRSLECGFSGWGCSNVKELDWDWEQLKYSLRVPNPDRMQAIYAAMKKGMKVD 535
           F E+F K+  +        G              K  L V + D+M+A+  A        
Sbjct: 918 FAEAFVKSQLAASVKLPSSG--------------KAFLSVKDSDKMKAVEIAR------- 956

Query: 536 EIHELSF 542
            +HE  F
Sbjct: 957 HLHEAGF 963


>gi|421661139|ref|ZP_16101317.1| carbamoyl-phosphate synthase, large subunit [Acinetobacter baumannii
            OIFC110]
 gi|421673339|ref|ZP_16113281.1| carbamoyl-phosphate synthase, large subunit [Acinetobacter baumannii
            OIFC065]
 gi|421689807|ref|ZP_16129480.1| carbamoyl-phosphate synthase, large subunit [Acinetobacter baumannii
            IS-116]
 gi|421808430|ref|ZP_16244278.1| carbamoyl-phosphate synthase, large subunit [Acinetobacter baumannii
            OIFC035]
 gi|404565311|gb|EKA70479.1| carbamoyl-phosphate synthase, large subunit [Acinetobacter baumannii
            IS-116]
 gi|408716142|gb|EKL61262.1| carbamoyl-phosphate synthase, large subunit [Acinetobacter baumannii
            OIFC110]
 gi|410386773|gb|EKP39240.1| carbamoyl-phosphate synthase, large subunit [Acinetobacter baumannii
            OIFC065]
 gi|410415745|gb|EKP67529.1| carbamoyl-phosphate synthase, large subunit [Acinetobacter baumannii
            OIFC035]
          Length = 1076

 Score = 1268 bits (3280), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 628/1080 (58%), Positives = 800/1080 (74%), Gaps = 36/1080 (3%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILI+GAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIKSILIIGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPSMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+T + V Q++EKERPDA+LPTMGGQTALN A+AL E+G LEKYGVELIGA  +A
Sbjct: 63   ATYIEPITWQTVAQIIEKERPDAVLPTMGGQTALNCALALDENGVLEKYGVELIGATKEA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I+KAEDR LF +AM+ IG++ P + I  T++E + I +  G FP+IIRP+FT+GG+GGGI
Sbjct: 123  IEKAEDRKLFDEAMRKIGLECPKAAIAETMEEALEIQSRFG-FPVIIRPSFTMGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEF  IC+ G   S T Q+L+++SL+GWKEYE+EV+RD  DN +I+C+IEN DPMG
Sbjct: 182  AYNREEFLEICERGFDLSPTHQLLIDESLIGWKEYEMEVVRDKNDNCIIVCAIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGVE GGSNVQF +NP DG ++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQLMRNASVAVLREIGVETGGSNVQFGINPKDGRMVVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKK-TPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT   TPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKIAAKLAVGYTLDELKNDITGGVTPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGW------GCSNVK 500
            F FEKFP +EP+LTTQMKSVGE MA+GR FQES QKALR LE G SG+      G +NVK
Sbjct: 362  FNFEKFPQAEPVLTTQMKSVGEVMAIGRNFQESVQKALRGLEVGVSGFDEKIEAGATNVK 421

Query: 501  ELDWDWEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQF 560
                  E +   L+VP P+R+  +  A + G  +D++ E + ID+WFL Q +++++ E  
Sbjct: 422  ------ETILKELKVPGPERIWYVADAFRHGFSLDDVFEATKIDRWFLVQIQDIVNTEAQ 475

Query: 561  LLTQSVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAE 620
            + T    ++T ++    KR+G SD +IA     ++K+ R++R +LGV P YKRVDTCAAE
Sbjct: 476  VKTLGFGDLTAENIRSFKRKGLSDLRIANLMGISQKQFRKQRWNLGVYPVYKRVDTCAAE 535

Query: 621  FEANTPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYET 680
            FE+ T YMYS+YD ECE+ P+ + K++++GGGPNRIGQGIEFDYCC H + +++  GYET
Sbjct: 536  FESGTAYMYSTYDEECEANPSNRDKIMVIGGGPNRIGQGIEFDYCCVHAALAMREDGYET 595

Query: 681  IMMNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQ 740
            IM+N NPETVSTDYDTSDRLYFEP+T+EDVL ++  E+P+G+IVQ+GGQTPLKL+    +
Sbjct: 596  IMVNCNPETVSTDYDTSDRLYFEPVTLEDVLEIVRTEKPKGVIVQYGGQTPLKLA----R 651

Query: 741  YLDEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALA 800
             L+E   P         I GTSPD+ID AEDRERF  +I+ L + QP   I KS  + ++
Sbjct: 652  ALEEAGTP---------IIGTSPDAIDRAEDRERFQQMIQRLQLRQPNNSIVKSAEEGIS 702

Query: 801  IAKEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEID 860
             A ++GYP+VVRPSYVLGGRAMEIVY ++ L  YL  AV+   E PVL+D +L DA E+D
Sbjct: 703  EAAKVGYPLVVRPSYVLGGRAMEIVYNEDELKRYLREAVQASNEAPVLLDHFLDDATEVD 762

Query: 861  VDALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNV 920
            VD ++D   +VVIGGIM+HIEQAG+HSGDSAC IP  ++S    D +   TI +AK L V
Sbjct: 763  VDCVSDG-KDVVIGGIMQHIEQAGIHSGDSACSIPPYSLSKEIQDEMRRQTIAMAKELGV 821

Query: 921  CGLMNCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTK 980
             GLMN Q+A+    D+Y+LE NPRASRTVPFVSK IG  LAK AA  M+G+SL   GFTK
Sbjct: 822  VGLMNVQFAV-KGNDIYVLEVNPRASRTVPFVSKCIGESLAKVAARCMAGQSLESQGFTK 880

Query: 981  EVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQK--- 1037
            E+IP   +VKEAV PF KF G D +LGPEM+STGEVMG+  +F  AF KA + +  +   
Sbjct: 881  EIIPNRFAVKEAVFPFAKFPGVDPMLGPEMKSTGEVMGVGQTFGEAFYKAVLGSNDRLPG 940

Query: 1038 LPLSGTV---FLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMH 1094
            LP  G V   FLS+ +  K ++  IAK  ++ GFK+V+T GT   L+  G+  E V K+ 
Sbjct: 941  LPTEGEVKHAFLSVRESDKKYIADIAKKLVEYGFKLVATGGTYQVLKEAGLECESVNKVT 1000

Query: 1095 EGRPHAGDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAI 1154
            EGRPH  D + NG+I ++V T+ G    Q D   +RR  L  KV   TT++GA A  +A 
Sbjct: 1001 EGRPHIVDRLKNGEIHLIVNTTEGKQA-QYDSAMIRRAALQGKVYYTTTINGAEAVCQAF 1059


>gi|384419198|ref|YP_005628558.1| carbamoyl-phosphate synthase large subunit [Xanthomonas oryzae pv.
            oryzicola BLS256]
 gi|353462111|gb|AEQ96390.1| carbamoyl-phosphate synthase, large subunit [Xanthomonas oryzae pv.
            oryzicola BLS256]
          Length = 1080

 Score = 1268 bits (3280), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 632/1068 (59%), Positives = 800/1068 (74%), Gaps = 21/1068 (1%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTDL+ ILI+GAGPIVIGQACEFDYSG QACKAL++EGY V+L+NSNPATIMTDP +AD
Sbjct: 3    KRTDLKTILIIGAGPIVIGQACEFDYSGAQACKALRDEGYRVVLVNSNPATIMTDPNMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
              YI P+  + VE+++ KE+PDALLPTMGGQTALN A+ LA+ G LEKY VELIGAK +A
Sbjct: 63   AVYIEPINWQTVEKIIAKEKPDALLPTMGGQTALNCALDLADHGVLEKYNVELIGAKREA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I+ AEDR+LF+ AM  IG+  P + + +TL+E + I   +G +P IIRP+FTLGG+GGGI
Sbjct: 123  IRMAEDRELFRVAMGEIGLDCPKAAVAHTLEEALEIQTRVG-YPTIIRPSFTLGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EE   I   GL  S T++VLVE+S+LGWKE+E+EV+RD ADN +I+C+IEN+DPMG
Sbjct: 182  AYNREELIEIVGRGLELSPTTEVLVEESVLGWKEFEMEVVRDTADNCIIVCAIENLDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQRLRD SIA++R+IGV+ GGSNVQF ++P  G V+VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQRLRDASIAVLRKIGVDTGGSNVQFGISPTTGRVVVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKK-TPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ N+IT   TPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGYTLDELRNEITGGLTPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVK-ELDWD 505
            FAFEKFP ++  LTTQMKSVGE MA+GRTFQES QKALR LE G  G   + +    + D
Sbjct: 362  FAFEKFPQADARLTTQMKSVGEVMAMGRTFQESLQKALRGLETGKIGLDPTGLDLSSEDD 421

Query: 506  WEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQS 565
               LK  L+ P P+R+  +  A + GM V E++ LSFID WFL Q +ELI  EQ L    
Sbjct: 422  IAALKRELKAPGPERLFYVADAFRAGMTVAEVYALSFIDPWFLDQIEELISHEQQLADDG 481

Query: 566  VSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANT 625
            ++ +       +KR GFSD ++A    S E+ VR  R +L V P YKRVD+CAAEF  +T
Sbjct: 482  MAALDAARLRMLKRAGFSDARLAELIGSNEESVRTLRRALEVRPVYKRVDSCAAEFATST 541

Query: 626  PYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNS 685
             YMYS+Y+ ECE+ PT + K++ILGGGPNRIGQGIEFDYCC H + +L+  G+ETIM+N 
Sbjct: 542  AYMYSTYEDECEALPTDRDKIMILGGGPNRIGQGIEFDYCCVHAALALRDDGFETIMVNC 601

Query: 686  NPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEH 745
            NPETVSTDYDTSDRLYFEPLT+EDVL +++LE+P+G+IVQ+GGQTPLKL+          
Sbjct: 602  NPETVSTDYDTSDRLYFEPLTLEDVLEIVELEKPKGVIVQYGGQTPLKLA---------- 651

Query: 746  RLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEI 805
            R   A+G   V + GTSPDSID AEDRERF  ++  L ++QP   IA++  +AL +A+EI
Sbjct: 652  RALEANG---VPVIGTSPDSIDLAEDRERFQQLVDTLGLKQPPNRIARNAEEALVLAREI 708

Query: 806  GYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALA 865
            GYP+VVRPSYVLGGRAMEIVY +  L  Y+ +AV+V  + PVL+D++L +A+E+DVD +A
Sbjct: 709  GYPLVVRPSYVLGGRAMEIVYGESDLARYVRDAVKVSNDSPVLLDRFLDNAVEVDVDIIA 768

Query: 866  DSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMN 925
            D  GNV+IGG+MEHIE+AGVHSGDS+C +P  ++S      +    + LA+ LNV GLMN
Sbjct: 769  DKDGNVLIGGVMEHIEEAGVHSGDSSCSLPPYSLSPQTQAELRRQVVMLAEGLNVVGLMN 828

Query: 926  CQYAITT--SGD--VYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKE 981
             Q+A+    +GD  VYLLE NPRASRTVPFVSKAIG PLAK AA  M+GK+L + G TKE
Sbjct: 829  TQFAVQVNEAGDDIVYLLEVNPRASRTVPFVSKAIGMPLAKIAARCMAGKTLAEQGATKE 888

Query: 982  VIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLS 1041
            ++P + SVKEA+ PF KFQG D +LGPEMRSTGEVMG+  SF  AFA+AQ A G K P  
Sbjct: 889  IVPDYYSVKEAIFPFAKFQGVDPILGPEMRSTGEVMGVGRSFSAAFARAQEAGGIKAPPV 948

Query: 1042 GTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAG 1101
            G  F+S+ D  K  +  +A+A ++ GF +V+T GT  +L+  G++ E V K+ EGRPH  
Sbjct: 949  GKAFVSVRDPDKQRVLPVAQALVERGFTLVATRGTGAWLQQNGLSCEIVNKVAEGRPHIV 1008

Query: 1102 DMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALA 1149
            D + NG+I  +V T+ G +    D   +RR  L ++V   TTV+GA A
Sbjct: 1009 DSIKNGEIVYIVNTTEGRAAIS-DSFSIRREALQHRVTYSTTVAGAKA 1055


>gi|332876149|ref|ZP_08443931.1| carbamoyl-phosphate synthase, large subunit [Acinetobacter baumannii
            6014059]
 gi|384132944|ref|YP_005515556.1| carbamoylphosphate synthase large subunit [Acinetobacter baumannii
            1656-2]
 gi|384144362|ref|YP_005527072.1| carbamoyl-phosphate synthase large subunit [Acinetobacter baumannii
            MDR-ZJ06]
 gi|385238691|ref|YP_005800030.1| carbamoylphosphate synthase large subuni [Acinetobacter baumannii
            TCDC-AB0715]
 gi|387122826|ref|YP_006288708.1| carbamoyl-phosphate synthase large subunit [Acinetobacter baumannii
            MDR-TJ]
 gi|416145193|ref|ZP_11600310.1| carbamoylphosphate synthase [Acinetobacter baumannii AB210]
 gi|417569109|ref|ZP_12219967.1| carbamoyl-phosphate synthase, large subunit [Acinetobacter baumannii
            OIFC189]
 gi|417575689|ref|ZP_12226537.1| carbamoyl-phosphate synthase, large subunit [Acinetobacter baumannii
            Naval-17]
 gi|417870484|ref|ZP_12515449.1| carbamoyl-phosphate synthase, large subunit [Acinetobacter baumannii
            ABNIH1]
 gi|417874526|ref|ZP_12519377.1| carbamoyl-phosphate synthase, large subunit [Acinetobacter baumannii
            ABNIH2]
 gi|417884486|ref|ZP_12528683.1| carbamoyl-phosphate synthase, large subunit [Acinetobacter baumannii
            ABNIH4]
 gi|421204927|ref|ZP_15662037.1| carbamoyl-phosphate synthase, large subunit [Acinetobacter baumannii
            AC12]
 gi|421536788|ref|ZP_15983017.1| carbamoyl-phosphate synthase, large subunit [Acinetobacter baumannii
            AC30]
 gi|421627906|ref|ZP_16068702.1| carbamoyl-phosphate synthase, large subunit [Acinetobacter baumannii
            OIFC180]
 gi|421688975|ref|ZP_16128664.1| carbamoyl-phosphate synthase, large subunit [Acinetobacter baumannii
            IS-143]
 gi|421704517|ref|ZP_16143962.1| carbamoyl-phosphate synthase large subunit [Acinetobacter baumannii
            ZWS1122]
 gi|421708295|ref|ZP_16147674.1| carbamoyl-phosphate synthase large subunit [Acinetobacter baumannii
            ZWS1219]
 gi|421792628|ref|ZP_16228779.1| carbamoyl-phosphate synthase, large subunit [Acinetobacter baumannii
            Naval-2]
 gi|424051320|ref|ZP_17788852.1| carbamoyl-phosphate synthase large chain [Acinetobacter baumannii
            Ab11111]
 gi|424062358|ref|ZP_17799844.1| carbamoyl-phosphate synthase large chain [Acinetobacter baumannii
            Ab44444]
 gi|425752241|ref|ZP_18870158.1| carbamoyl-phosphate synthase, large subunit [Acinetobacter baumannii
            Naval-113]
 gi|445469831|ref|ZP_21451411.1| carbamoyl-phosphate synthase, large subunit [Acinetobacter baumannii
            OIFC338]
 gi|445477241|ref|ZP_21454216.1| carbamoyl-phosphate synthase, large subunit [Acinetobacter baumannii
            Naval-78]
 gi|322509164|gb|ADX04618.1| carbamoylphosphate synthase large subunit [Acinetobacter baumannii
            1656-2]
 gi|323519192|gb|ADX93573.1| carbamoylphosphate synthase large subuni [Acinetobacter baumannii
            TCDC-AB0715]
 gi|332735647|gb|EGJ66692.1| carbamoyl-phosphate synthase, large subunit [Acinetobacter baumannii
            6014059]
 gi|333367309|gb|EGK49323.1| carbamoylphosphate synthase [Acinetobacter baumannii AB210]
 gi|342227876|gb|EGT92785.1| carbamoyl-phosphate synthase, large subunit [Acinetobacter baumannii
            ABNIH1]
 gi|342228740|gb|EGT93619.1| carbamoyl-phosphate synthase, large subunit [Acinetobacter baumannii
            ABNIH2]
 gi|342234271|gb|EGT98940.1| carbamoyl-phosphate synthase, large subunit [Acinetobacter baumannii
            ABNIH4]
 gi|347594855|gb|AEP07576.1| carbamoyl-phosphate synthase, large subunit [Acinetobacter baumannii
            MDR-ZJ06]
 gi|385877318|gb|AFI94413.1| carbamoyl-phosphate synthase, large subunit [Acinetobacter baumannii
            MDR-TJ]
 gi|395553332|gb|EJG19338.1| carbamoyl-phosphate synthase, large subunit [Acinetobacter baumannii
            OIFC189]
 gi|395571178|gb|EJG31837.1| carbamoyl-phosphate synthase, large subunit [Acinetobacter baumannii
            Naval-17]
 gi|398325570|gb|EJN41738.1| carbamoyl-phosphate synthase, large subunit [Acinetobacter baumannii
            AC12]
 gi|404559338|gb|EKA64602.1| carbamoyl-phosphate synthase, large subunit [Acinetobacter baumannii
            IS-143]
 gi|404664876|gb|EKB32839.1| carbamoyl-phosphate synthase large chain [Acinetobacter baumannii
            Ab11111]
 gi|404672085|gb|EKB39925.1| carbamoyl-phosphate synthase large chain [Acinetobacter baumannii
            Ab44444]
 gi|407190351|gb|EKE61570.1| carbamoyl-phosphate synthase large subunit [Acinetobacter baumannii
            ZWS1122]
 gi|407190908|gb|EKE62123.1| carbamoyl-phosphate synthase large subunit [Acinetobacter baumannii
            ZWS1219]
 gi|408709603|gb|EKL54847.1| carbamoyl-phosphate synthase, large subunit [Acinetobacter baumannii
            OIFC180]
 gi|409985301|gb|EKO41525.1| carbamoyl-phosphate synthase, large subunit [Acinetobacter baumannii
            AC30]
 gi|410399660|gb|EKP51845.1| carbamoyl-phosphate synthase, large subunit [Acinetobacter baumannii
            Naval-2]
 gi|425499187|gb|EKU65243.1| carbamoyl-phosphate synthase, large subunit [Acinetobacter baumannii
            Naval-113]
 gi|444773743|gb|ELW97835.1| carbamoyl-phosphate synthase, large subunit [Acinetobacter baumannii
            OIFC338]
 gi|444776748|gb|ELX00786.1| carbamoyl-phosphate synthase, large subunit [Acinetobacter baumannii
            Naval-78]
          Length = 1076

 Score = 1267 bits (3279), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 628/1080 (58%), Positives = 800/1080 (74%), Gaps = 36/1080 (3%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILI+GAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIKSILIIGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPSMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+T + V Q++EKERPDA+LPTMGGQTALN A+AL E+G LEKYGVELIGA  +A
Sbjct: 63   ATYIEPITWQTVAQIIEKERPDAVLPTMGGQTALNCALALDENGVLEKYGVELIGATKEA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I+KAEDR LF +AM+ IG++ P + I  T++E + I +  G FP+IIRP+FT+GG+GGGI
Sbjct: 123  IEKAEDRKLFDEAMRKIGLECPKAAIAETMEEALEIQSRFG-FPVIIRPSFTMGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEF  IC+ G   S T Q+L+++SL+GWKEYE+EV+RD  DN +I+C+IEN DPMG
Sbjct: 182  AYNREEFLEICERGFDLSPTHQLLIDESLIGWKEYEMEVVRDKNDNCIIVCAIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGVE GGSNVQF +NP DG ++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQLMRNASVAVLREIGVETGGSNVQFGINPKDGRMVVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKK-TPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT   TPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKIAAKLAVGYTLDELKNDITGGVTPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGW------GCSNVK 500
            F FEKFP +EP+LTTQMKSVGE MA+GR FQES QKALR LE G SG+      G +NVK
Sbjct: 362  FNFEKFPQAEPVLTTQMKSVGEVMAIGRNFQESVQKALRGLEVGVSGFDEKVEAGATNVK 421

Query: 501  ELDWDWEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQF 560
                  E +   L+VP P+R+  +  A + G  +D++ E + ID+WFL Q +++++ E  
Sbjct: 422  ------ETILKELKVPGPERIWYVADAFRHGFSLDDVFEATKIDRWFLIQIQDIVNTEAQ 475

Query: 561  LLTQSVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAE 620
            + T    ++T ++    KR+G SD +IA     ++K+ R++R +LGV P YKRVDTCAAE
Sbjct: 476  VKTLGFGDLTAENIRSFKRKGLSDLRIANLMGISQKQFRKQRWNLGVYPVYKRVDTCAAE 535

Query: 621  FEANTPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYET 680
            FE+ T YMYS+YD ECE+ P+ + K++++GGGPNRIGQGIEFDYCC H + +++  GYET
Sbjct: 536  FESGTAYMYSTYDEECEANPSNRDKIMVIGGGPNRIGQGIEFDYCCVHAALAMREDGYET 595

Query: 681  IMMNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQ 740
            IM+N NPETVSTDYDTSDRLYFEP+T+EDVL ++  E+P+G+IVQ+GGQTPLKL+    +
Sbjct: 596  IMVNCNPETVSTDYDTSDRLYFEPVTLEDVLEIVRTEKPKGVIVQYGGQTPLKLA----R 651

Query: 741  YLDEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALA 800
             L+E   P         I GTSPD+ID AEDRERF  +I+ L + QP   I KS  + ++
Sbjct: 652  ALEEAGTP---------IIGTSPDAIDRAEDRERFQQMIQRLQLRQPNNSIVKSAEEGIS 702

Query: 801  IAKEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEID 860
             A ++GYP+VVRPSYVLGGRAMEIVY ++ L  YL  AV+   E PVL+D +L DA E+D
Sbjct: 703  EAAKVGYPLVVRPSYVLGGRAMEIVYNEDELKRYLREAVQASNEAPVLLDHFLDDATEVD 762

Query: 861  VDALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNV 920
            VD ++D   +VVIGGIM+HIEQAG+HSGDSAC IP  ++S    D +   TI +AK L V
Sbjct: 763  VDCVSDG-KDVVIGGIMQHIEQAGIHSGDSACSIPPYSLSKEIQDEMRRQTIAMAKELGV 821

Query: 921  CGLMNCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTK 980
             GLMN Q+A+    D+Y+LE NPRASRTVPFVSK IG  LAK AA  M+G+SL   GFTK
Sbjct: 822  VGLMNVQFAV-KGNDIYVLEVNPRASRTVPFVSKCIGESLAKVAARCMAGQSLESQGFTK 880

Query: 981  EVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQK--- 1037
            E+IP   +VKEAV PF KF G D +LGPEM+STGEVMG+  +F  AF KA + +  +   
Sbjct: 881  EIIPNRFAVKEAVFPFAKFPGVDPMLGPEMKSTGEVMGVGQTFGEAFYKAVLGSNDRLPG 940

Query: 1038 LPLSGTV---FLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMH 1094
            LP  G V   FLS+ +  K ++  IAK  ++ GFK+V+T GT   L+  G+  E V K+ 
Sbjct: 941  LPTEGEVKHAFLSVRESDKKYIADIAKKLVEYGFKLVATGGTYQVLKEAGLECESVNKVT 1000

Query: 1095 EGRPHAGDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAI 1154
            EGRPH  D + NG+I ++V T+ G    Q D   +RR  L  KV   TT++GA A  +A 
Sbjct: 1001 EGRPHIVDRLKNGEIHLIVNTTEGKQA-QYDSAMIRRAALQGKVYYTTTINGAEAVCQAF 1059


>gi|169794964|ref|YP_001712757.1| carbamoyl-phosphate synthase large subunit [Acinetobacter baumannii
            AYE]
 gi|213157625|ref|YP_002320423.1| carbamoyl-phosphate synthase large subunit [Acinetobacter baumannii
            AB0057]
 gi|215482515|ref|YP_002324703.1| Carbamoyl-phosphate synthase large chain(Carbamoyl-phosphate
            synthetase ammonia chain) [Acinetobacter baumannii
            AB307-0294]
 gi|239503381|ref|ZP_04662691.1| Carbamoyl-phosphate synthase large chain(Carbamoyl-phosphate
            synthetase ammonia chain) [Acinetobacter baumannii AB900]
 gi|260556446|ref|ZP_05828664.1| carbamoyl-phosphate synthase, large subunit [Acinetobacter baumannii
            ATCC 19606 = CIP 70.34]
 gi|301346070|ref|ZP_07226811.1| carbamoyl-phosphate synthase, large subunit [Acinetobacter baumannii
            AB056]
 gi|301511498|ref|ZP_07236735.1| carbamoyl-phosphate synthase, large subunit [Acinetobacter baumannii
            AB058]
 gi|301595421|ref|ZP_07240429.1| carbamoyl-phosphate synthase, large subunit [Acinetobacter baumannii
            AB059]
 gi|332855123|ref|ZP_08435706.1| carbamoyl-phosphate synthase, large subunit [Acinetobacter baumannii
            6013150]
 gi|332868231|ref|ZP_08438073.1| carbamoyl-phosphate synthase, large subunit [Acinetobacter baumannii
            6013113]
 gi|403674602|ref|ZP_10936849.1| carbamoyl-phosphate synthase large subunit [Acinetobacter sp. NCTC
            10304]
 gi|417546253|ref|ZP_12197339.1| carbamoyl-phosphate synthase, large subunit [Acinetobacter baumannii
            OIFC032]
 gi|417550720|ref|ZP_12201799.1| carbamoyl-phosphate synthase, large subunit [Acinetobacter baumannii
            Naval-18]
 gi|417554553|ref|ZP_12205622.1| carbamoyl-phosphate synthase, large subunit [Acinetobacter baumannii
            Naval-81]
 gi|417560163|ref|ZP_12211042.1| carbamoyl-phosphate synthase, large subunit [Acinetobacter baumannii
            OIFC137]
 gi|417564100|ref|ZP_12214974.1| carbamoyl-phosphate synthase, large subunit [Acinetobacter baumannii
            OIFC143]
 gi|417573287|ref|ZP_12224141.1| carbamoyl-phosphate synthase, large subunit [Acinetobacter baumannii
            Canada BC-5]
 gi|421198365|ref|ZP_15655530.1| carbamoyl-phosphate synthase, large subunit [Acinetobacter baumannii
            OIFC109]
 gi|421454998|ref|ZP_15904345.1| carbamoyl-phosphate synthase, large subunit [Acinetobacter baumannii
            IS-123]
 gi|421622634|ref|ZP_16063534.1| carbamoyl-phosphate synthase, large subunit [Acinetobacter baumannii
            OIFC074]
 gi|421626103|ref|ZP_16066932.1| carbamoyl-phosphate synthase, large subunit [Acinetobacter baumannii
            OIFC098]
 gi|421632404|ref|ZP_16073060.1| carbamoyl-phosphate synthase, large subunit [Acinetobacter baumannii
            Naval-13]
 gi|421643282|ref|ZP_16083784.1| carbamoyl-phosphate synthase, large subunit [Acinetobacter baumannii
            IS-235]
 gi|421646623|ref|ZP_16087069.1| carbamoyl-phosphate synthase, large subunit [Acinetobacter baumannii
            IS-251]
 gi|421652658|ref|ZP_16093007.1| carbamoyl-phosphate synthase, large subunit [Acinetobacter baumannii
            OIFC0162]
 gi|421655314|ref|ZP_16095637.1| carbamoyl-phosphate synthase, large subunit [Acinetobacter baumannii
            Naval-72]
 gi|421657183|ref|ZP_16097457.1| carbamoyl-phosphate synthase, large subunit [Acinetobacter baumannii
            Naval-83]
 gi|421667327|ref|ZP_16107400.1| carbamoyl-phosphate synthase, large subunit [Acinetobacter baumannii
            OIFC087]
 gi|421670287|ref|ZP_16110289.1| carbamoyl-phosphate synthase, large subunit [Acinetobacter baumannii
            OIFC099]
 gi|421678843|ref|ZP_16118726.1| carbamoyl-phosphate synthase, large subunit [Acinetobacter baumannii
            OIFC111]
 gi|421694562|ref|ZP_16134183.1| carbamoyl-phosphate synthase, large subunit [Acinetobacter baumannii
            WC-692]
 gi|421698658|ref|ZP_16138198.1| carbamoyl-phosphate synthase, large subunit [Acinetobacter baumannii
            IS-58]
 gi|421787367|ref|ZP_16223721.1| carbamoyl-phosphate synthase, large subunit [Acinetobacter baumannii
            Naval-82]
 gi|421796277|ref|ZP_16232343.1| carbamoyl-phosphate synthase, large subunit [Acinetobacter baumannii
            Naval-21]
 gi|421799955|ref|ZP_16235941.1| carbamoyl-phosphate synthase, large subunit [Acinetobacter baumannii
            Canada BC1]
 gi|421805201|ref|ZP_16241091.1| carbamoyl-phosphate synthase, large subunit [Acinetobacter baumannii
            WC-A-694]
 gi|424058895|ref|ZP_17796386.1| carbamoyl-phosphate synthase large chain [Acinetobacter baumannii
            Ab33333]
 gi|425749442|ref|ZP_18867421.1| carbamoyl-phosphate synthase, large subunit [Acinetobacter baumannii
            WC-348]
 gi|445401836|ref|ZP_21430455.1| carbamoyl-phosphate synthase, large subunit [Acinetobacter baumannii
            Naval-57]
 gi|445451954|ref|ZP_21444887.1| carbamoyl-phosphate synthase, large subunit [Acinetobacter baumannii
            WC-A-92]
 gi|445460403|ref|ZP_21448312.1| carbamoyl-phosphate synthase, large subunit [Acinetobacter baumannii
            OIFC047]
 gi|445490412|ref|ZP_21459125.1| carbamoyl-phosphate synthase, large subunit [Acinetobacter baumannii
            AA-014]
 gi|169147891|emb|CAM85754.1| carbamoyl-phosphate synthase, large subunit [Acinetobacter baumannii
            AYE]
 gi|193078157|gb|ABO13100.2| carbamoyl-phosphate synthase large subunit [Acinetobacter baumannii
            ATCC 17978]
 gi|213056785|gb|ACJ41687.1| carbamoyl-phosphate synthase, large subunit [Acinetobacter baumannii
            AB0057]
 gi|213987785|gb|ACJ58084.1| Carbamoyl-phosphate synthase large chain(Carbamoyl-phosphate
            synthetase ammonia chain) [Acinetobacter baumannii
            AB307-0294]
 gi|260409705|gb|EEX03005.1| carbamoyl-phosphate synthase, large subunit [Acinetobacter baumannii
            ATCC 19606 = CIP 70.34]
 gi|332727626|gb|EGJ59045.1| carbamoyl-phosphate synthase, large subunit [Acinetobacter baumannii
            6013150]
 gi|332733492|gb|EGJ64662.1| carbamoyl-phosphate synthase, large subunit [Acinetobacter baumannii
            6013113]
 gi|395522745|gb|EJG10834.1| carbamoyl-phosphate synthase, large subunit [Acinetobacter baumannii
            OIFC137]
 gi|395555856|gb|EJG21857.1| carbamoyl-phosphate synthase, large subunit [Acinetobacter baumannii
            OIFC143]
 gi|395565261|gb|EJG26908.1| carbamoyl-phosphate synthase, large subunit [Acinetobacter baumannii
            OIFC109]
 gi|400208855|gb|EJO39825.1| carbamoyl-phosphate synthase, large subunit [Acinetobacter baumannii
            Canada BC-5]
 gi|400212788|gb|EJO43747.1| carbamoyl-phosphate synthase, large subunit [Acinetobacter baumannii
            IS-123]
 gi|400384141|gb|EJP42819.1| carbamoyl-phosphate synthase, large subunit [Acinetobacter baumannii
            OIFC032]
 gi|400386545|gb|EJP49619.1| carbamoyl-phosphate synthase, large subunit [Acinetobacter baumannii
            Naval-18]
 gi|400390970|gb|EJP58017.1| carbamoyl-phosphate synthase, large subunit [Acinetobacter baumannii
            Naval-81]
 gi|404567778|gb|EKA72894.1| carbamoyl-phosphate synthase, large subunit [Acinetobacter baumannii
            WC-692]
 gi|404572354|gb|EKA77398.1| carbamoyl-phosphate synthase, large subunit [Acinetobacter baumannii
            IS-58]
 gi|404670639|gb|EKB38527.1| carbamoyl-phosphate synthase large chain [Acinetobacter baumannii
            Ab33333]
 gi|408504522|gb|EKK06269.1| carbamoyl-phosphate synthase, large subunit [Acinetobacter baumannii
            OIFC0162]
 gi|408508639|gb|EKK10318.1| carbamoyl-phosphate synthase, large subunit [Acinetobacter baumannii
            Naval-72]
 gi|408509468|gb|EKK11140.1| carbamoyl-phosphate synthase, large subunit [Acinetobacter baumannii
            IS-235]
 gi|408517335|gb|EKK18879.1| carbamoyl-phosphate synthase, large subunit [Acinetobacter baumannii
            IS-251]
 gi|408694657|gb|EKL40221.1| carbamoyl-phosphate synthase, large subunit [Acinetobacter baumannii
            OIFC074]
 gi|408695374|gb|EKL40929.1| carbamoyl-phosphate synthase, large subunit [Acinetobacter baumannii
            OIFC098]
 gi|408709284|gb|EKL54531.1| carbamoyl-phosphate synthase, large subunit [Acinetobacter baumannii
            Naval-13]
 gi|408714234|gb|EKL59388.1| carbamoyl-phosphate synthase, large subunit [Acinetobacter baumannii
            Naval-83]
 gi|410385025|gb|EKP37521.1| carbamoyl-phosphate synthase, large subunit [Acinetobacter baumannii
            OIFC087]
 gi|410385654|gb|EKP38139.1| carbamoyl-phosphate synthase, large subunit [Acinetobacter baumannii
            OIFC099]
 gi|410391933|gb|EKP44296.1| carbamoyl-phosphate synthase, large subunit [Acinetobacter baumannii
            OIFC111]
 gi|410399605|gb|EKP51792.1| carbamoyl-phosphate synthase, large subunit [Acinetobacter baumannii
            Naval-21]
 gi|410407647|gb|EKP59629.1| carbamoyl-phosphate synthase, large subunit [Acinetobacter baumannii
            Naval-82]
 gi|410408815|gb|EKP60760.1| carbamoyl-phosphate synthase, large subunit [Acinetobacter baumannii
            Canada BC1]
 gi|410409451|gb|EKP61382.1| carbamoyl-phosphate synthase, large subunit [Acinetobacter baumannii
            WC-A-694]
 gi|425489137|gb|EKU55454.1| carbamoyl-phosphate synthase, large subunit [Acinetobacter baumannii
            WC-348]
 gi|444754871|gb|ELW79480.1| carbamoyl-phosphate synthase, large subunit [Acinetobacter baumannii
            WC-A-92]
 gi|444765675|gb|ELW89964.1| carbamoyl-phosphate synthase, large subunit [Acinetobacter baumannii
            AA-014]
 gi|444773638|gb|ELW97734.1| carbamoyl-phosphate synthase, large subunit [Acinetobacter baumannii
            OIFC047]
 gi|444782922|gb|ELX06795.1| carbamoyl-phosphate synthase, large subunit [Acinetobacter baumannii
            Naval-57]
 gi|452946697|gb|EME52192.1| carbamoyl-phosphate synthase large subunit [Acinetobacter baumannii
            MSP4-16]
          Length = 1076

 Score = 1267 bits (3279), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 628/1080 (58%), Positives = 800/1080 (74%), Gaps = 36/1080 (3%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILI+GAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIKSILIIGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPSMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+T + V Q++EKERPDA+LPTMGGQTALN A+AL E+G LEKYGVELIGA  +A
Sbjct: 63   ATYIEPITWQTVAQIIEKERPDAVLPTMGGQTALNCALALDENGVLEKYGVELIGATKEA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I+KAEDR LF +AM+ IG++ P + I  T++E + I +  G FP+IIRP+FT+GG+GGGI
Sbjct: 123  IEKAEDRKLFDEAMRKIGLECPKAAIAETMEEALEIQSRFG-FPVIIRPSFTMGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEF  IC+ G   S T Q+L+++SL+GWKEYE+EV+RD  DN +I+C+IEN DPMG
Sbjct: 182  AYNREEFLEICERGFDLSPTHQLLIDESLIGWKEYEMEVVRDKNDNCIIVCAIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGVE GGSNVQF +NP DG ++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQLMRNASVAVLREIGVETGGSNVQFGINPKDGRMVVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKK-TPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT   TPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKIAAKLAVGYTLDELKNDITGGVTPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGW------GCSNVK 500
            F FEKFP +EP+LTTQMKSVGE MA+GR FQES QKALR LE G SG+      G +NVK
Sbjct: 362  FNFEKFPQAEPVLTTQMKSVGEVMAIGRNFQESVQKALRGLEVGVSGFDEKIEAGATNVK 421

Query: 501  ELDWDWEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQF 560
                  E +   L+VP P+R+  +  A + G  +D++ E + ID+WFL Q +++++ E  
Sbjct: 422  ------ETILKELKVPGPERIWYVADAFRHGFSLDDVFEATKIDRWFLIQIQDIVNTEAQ 475

Query: 561  LLTQSVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAE 620
            + T    ++T ++    KR+G SD +IA     ++K+ R++R +LGV P YKRVDTCAAE
Sbjct: 476  VKTLGFGDLTAENIRSFKRKGLSDLRIANLMGISQKQFRKQRWNLGVYPVYKRVDTCAAE 535

Query: 621  FEANTPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYET 680
            FE+ T YMYS+YD ECE+ P+ + K++++GGGPNRIGQGIEFDYCC H + +++  GYET
Sbjct: 536  FESGTAYMYSTYDEECEANPSNRDKIMVIGGGPNRIGQGIEFDYCCVHAALAMREDGYET 595

Query: 681  IMMNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQ 740
            IM+N NPETVSTDYDTSDRLYFEP+T+EDVL ++  E+P+G+IVQ+GGQTPLKL+    +
Sbjct: 596  IMVNCNPETVSTDYDTSDRLYFEPVTLEDVLEIVRTEKPKGVIVQYGGQTPLKLA----R 651

Query: 741  YLDEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALA 800
             L+E   P         I GTSPD+ID AEDRERF  +I+ L + QP   I KS  + ++
Sbjct: 652  ALEEAGTP---------IIGTSPDAIDRAEDRERFQQMIQRLQLRQPNNSIVKSAEEGIS 702

Query: 801  IAKEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEID 860
             A ++GYP+VVRPSYVLGGRAMEIVY ++ L  YL  AV+   E PVL+D +L DA E+D
Sbjct: 703  EAAKVGYPLVVRPSYVLGGRAMEIVYNEDELKRYLREAVQASNEAPVLLDHFLDDATEVD 762

Query: 861  VDALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNV 920
            VD ++D   +VVIGGIM+HIEQAG+HSGDSAC IP  ++S    D +   TI +AK L V
Sbjct: 763  VDCVSDG-KDVVIGGIMQHIEQAGIHSGDSACSIPPYSLSKEIQDEMRRQTIAMAKELGV 821

Query: 921  CGLMNCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTK 980
             GLMN Q+A+    D+Y+LE NPRASRTVPFVSK IG  LAK AA  M+G+SL   GFTK
Sbjct: 822  VGLMNVQFAV-KGNDIYVLEVNPRASRTVPFVSKCIGESLAKVAARCMAGQSLESQGFTK 880

Query: 981  EVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQK--- 1037
            E+IP   +VKEAV PF KF G D +LGPEM+STGEVMG+  +F  AF KA + +  +   
Sbjct: 881  EIIPNRFAVKEAVFPFAKFPGVDPMLGPEMKSTGEVMGVGQTFGEAFYKAVLGSNDRLPG 940

Query: 1038 LPLSGTV---FLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMH 1094
            LP  G V   FLS+ +  K ++  IAK  ++ GFK+V+T GT   L+  G+  E V K+ 
Sbjct: 941  LPTEGEVKHAFLSVRESDKKYIADIAKKLVEYGFKLVATGGTYQVLKEAGLECESVNKVT 1000

Query: 1095 EGRPHAGDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAI 1154
            EGRPH  D + NG+I ++V T+ G    Q D   +RR  L  KV   TT++GA A  +A 
Sbjct: 1001 EGRPHIVDRLKNGEIHLIVNTTEGKQA-QYDSAMIRRAALQGKVYYTTTINGAEAVCQAF 1059


>gi|418532370|ref|ZP_13098278.1| carbamoyl-phosphate synthase, large subunit [Comamonas testosteroni
            ATCC 11996]
 gi|371450601|gb|EHN63645.1| carbamoyl-phosphate synthase, large subunit [Comamonas testosteroni
            ATCC 11996]
          Length = 1083

 Score = 1267 bits (3278), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 631/1084 (58%), Positives = 803/1084 (74%), Gaps = 30/1084 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KR DL+ ILI+GAGPIVIGQACEFDYSG QACKAL+EEGY+VILINSNPATIMTDP  AD
Sbjct: 3    KRNDLKSILIIGAGPIVIGQACEFDYSGVQACKALREEGYKVILINSNPATIMTDPATAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+T + VE+++ KERPDA+LPTMGGQTALN A+ L ++G L+KY VELIGAK +A
Sbjct: 63   VTYIEPITWQTVEKIIAKERPDAILPTMGGQTALNCALDLWKNGVLDKYKVELIGAKPEA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  FK AM  IG+ +  SGI +++DE  ++  ++G FP +IRP+FTLGGTGGGI
Sbjct: 123  IDKAEDRLKFKDAMTKIGLGSARSGIAHSMDEAWAVQKQMG-FPTVIRPSFTLGGTGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN EEFE ICK GL AS T+++L+E+SLLGWKEYE+EV+RD ADN +I+CSIEN+DPMG
Sbjct: 182  AYNPEEFETICKRGLEASPTNELLIEESLLGWKEYEMEVVRDTADNCIIVCSIENLDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGV+ GGSNVQF+VNP DG ++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQIMRNASLAVLREIGVDTGGSNVQFSVNPKDGRMIVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VG++LD++ N+IT  KTPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKIAAKLAVGFTLDELKNEITGGKTPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            FAFEKFP ++  LTTQMKSVGE MA+GRTFQESFQKALR LE G  G     + E   D 
Sbjct: 362  FAFEKFPAADNRLTTQMKSVGEVMAIGRTFQESFQKALRGLEVGVDG-----MNEKTQDR 416

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLT--- 563
            E L+  L  P PDR+  +  A   G  +DE+H ++ IDKWFL Q +E++ +E  L     
Sbjct: 417  EILEKELGEPGPDRIWYVGDAFAAGWSLDEVHNITKIDKWFLVQIEEIVKIELELDKLYE 476

Query: 564  ----QSVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAA 619
                 +++ +       +K++GFSD+++A    +++K VRE R +L V P +KRVDTCAA
Sbjct: 477  AKGEGALAALDAQTLRSLKQKGFSDRRLAKLLHTSDKAVREARKALKVRPVFKRVDTCAA 536

Query: 620  EFEANTPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYE 679
            EF +NT YMYS+YD ECE+APT KKK+++LGGGPNRIGQGIEFDYCC H + +++  GYE
Sbjct: 537  EFASNTAYMYSTYDEECEAAPTDKKKIMVLGGGPNRIGQGIEFDYCCVHAAMAMREDGYE 596

Query: 680  TIMMNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIH 739
            TIM+N NPETVSTDYDTSDRLYFEPLT+EDVL ++D+E+PEG+IVQ+GGQTPLKL+L + 
Sbjct: 597  TIMVNCNPETVSTDYDTSDRLYFEPLTLEDVLEIVDVEQPEGVIVQYGGQTPLKLALGLE 656

Query: 740  QYLDEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADAL 799
            +            +G V+I GT+PD IDAAEDRERF  ++ EL + QP    A++EA+AL
Sbjct: 657  R------------EG-VKIIGTTPDMIDAAEDRERFQKLLNELGLRQPPNATARTEAEAL 703

Query: 800  AIAKEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEI 859
              A  +GYP+VVRPSYVLGGRAMEIV+    L  Y+  AV+V  + PVL+D +LS+AIE 
Sbjct: 704  EKAAGLGYPLVVRPSYVLGGRAMEIVHEQRDLERYMREAVKVSNDSPVLLDHFLSNAIEC 763

Query: 860  DVDALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLN 919
            DVD + D  G V IGG+MEHIEQAGVHSGDSAC +P   + +  +  I   T  +A+ L+
Sbjct: 764  DVDCVRDKTGAVYIGGVMEHIEQAGVHSGDSACSLPPYYLKAETVAEIKRQTAAMAEGLH 823

Query: 920  VCGLMNCQYAITTSGD---VYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDL 976
            V GLMN Q+AI  +     +Y+LE NPRASRTVPFVSKA G  LAK AA  M+G++L + 
Sbjct: 824  VVGLMNVQFAIKEADGQDVIYVLEVNPRASRTVPFVSKATGVQLAKVAARCMAGQTLAEQ 883

Query: 977  GFTKEVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQ 1036
            G TKEV P + SVKEAV PF KF G D +LGPEM+STGEVMG+  +F  AF K+Q+ AG 
Sbjct: 884  GVTKEVTPPYFSVKEAVFPFVKFPGVDTILGPEMKSTGEVMGVGKTFGEAFVKSQMGAGV 943

Query: 1037 KLPLSGTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEG 1096
             LP  G VFLS+ +  K     +AK  + +G+ + +T GTA  +   G+ V+ V K+ EG
Sbjct: 944  HLPAEGKVFLSVKNNDKTRAVAVAKELVAMGYHLCATRGTAAAIAEAGLEVQAVNKVTEG 1003

Query: 1097 RPHAGDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRS 1156
            RPH  DM+ NG+I +++ T         D  ++R   L  +V   TT+ GA A  E +++
Sbjct: 1004 RPHIVDMIKNGEIALVINTVEERRNAIADSRQIRTSALLARVTTFTTIFGAEAAVEGMKA 1063

Query: 1157 LKSN 1160
            ++ +
Sbjct: 1064 MRGS 1067


>gi|329910106|ref|ZP_08275232.1| Carbamoyl-phosphate synthase large chain [Oxalobacteraceae bacterium
            IMCC9480]
 gi|327546259|gb|EGF31290.1| Carbamoyl-phosphate synthase large chain [Oxalobacteraceae bacterium
            IMCC9480]
          Length = 1076

 Score = 1267 bits (3278), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 642/1080 (59%), Positives = 810/1080 (75%), Gaps = 28/1080 (2%)

Query: 86   LGKRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGL 145
            + KRTD++ ILI+GAGPI+IGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +
Sbjct: 1    MAKRTDIKSILIIGAGPIIIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEM 60

Query: 146  ADRTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKL 205
            AD TYI P+T ++VE ++ KERPDA+LPTMGGQTALN A+ L  +G L KY  ELIGA  
Sbjct: 61   ADVTYIEPITWQVVESIIAKERPDAILPTMGGQTALNCALDLHHNGVLTKYNCELIGASP 120

Query: 206  DAIKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGG 265
            +AI  AEDR  FK+AM  IG+ +  SGI +TLDE  ++   +G FP++IRP+FT+GG+GG
Sbjct: 121  EAIDMAEDRSKFKEAMTRIGLGSARSGIAHTLDEAWTVQKTLG-FPIVIRPSFTMGGSGG 179

Query: 266  GIAYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDP 325
            GIAYN EEFE ICK GL AS T+++L+E+SLLGWKE+E+EV+RD  DN +I+CSIEN+DP
Sbjct: 180  GIAYNSEEFETICKRGLEASPTTELLIEESLLGWKEFEMEVVRDKMDNCIIVCSIENLDP 239

Query: 326  MGVHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIE 385
            MGVHTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGV+ GGSNVQF++NPVDG ++VIE
Sbjct: 240  MGVHTGDSITVAPAQTLTDKEYQIMRNASLAVLREIGVDTGGSNVQFSINPVDGRMIVIE 299

Query: 386  MNPRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITK-KTPASFEPSIDYVVTKI 444
            MNPRVSRSSALASKATGFPIAK+AAKL+VG++LD++ NDIT   TPASFEPSIDYVVTKI
Sbjct: 300  MNPRVSRSSALASKATGFPIAKIAAKLAVGFTLDELRNDITGGATPASFEPSIDYVVTKI 359

Query: 445  PRFAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDW 504
            PRF FEKFP ++  LTTQMKSVGE MA+GRTFQESFQKALR LE G  G     + E   
Sbjct: 360  PRFTFEKFPTADNHLTTQMKSVGEVMAIGRTFQESFQKALRGLEVGVDG-----MNEKTT 414

Query: 505  DWEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQ 564
            D E ++  L  P PDR+  +  A  +G  ++E+H+L+ ID WFL Q KE++D+E +L T+
Sbjct: 415  DRETIEEELGEPGPDRIWYVGDAFAQGFTMEEVHQLTHIDPWFLIQIKEIVDLELWLETK 474

Query: 565  SVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEAN 624
            S+ ++ K   +++K++GF+D+++A   K+T+K VREKR +L + P YKRVDTCA EF  +
Sbjct: 475  SLDDLDKATLFKLKQKGFADRRLAKLLKTTDKVVREKRHALNIRPVYKRVDTCAGEFSTD 534

Query: 625  TPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMN 684
            T YMYS+Y+ ECESAPT KKK+++LGGGPNRIGQGIEFDYCC H + +++  GYETIM+N
Sbjct: 535  TAYMYSTYEEECESAPTNKKKIMVLGGGPNRIGQGIEFDYCCVHAALAMREDGYETIMVN 594

Query: 685  SNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDE 744
             NPETVSTDYDTSDRLYFEPLT+EDVL ++D E+P G+IVQ+GGQTPLKL+L +      
Sbjct: 595  CNPETVSTDYDTSDRLYFEPLTLEDVLEIVDKEKPYGVIVQYGGQTPLKLALDLE----- 649

Query: 745  HRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKE 804
                 A+G   V I GTSPD IDAAEDRERF+ ++K+L + QP    A++EADAL +A+E
Sbjct: 650  -----ANG---VPIVGTSPDMIDAAEDRERFSQLLKDLGLRQPPNRTARTEADALLLAQE 701

Query: 805  IGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDAL 864
            IGYP+VVRPSYVLGGRAMEIV+    L  Y+  AV+V  + PVL+D++L+DAIE+DVD L
Sbjct: 702  IGYPLVVRPSYVLGGRAMEIVHEQRDLERYMREAVKVSHDSPVLLDRFLNDAIEVDVDCL 761

Query: 865  ADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLM 924
            +D      IGG+MEHIEQAGVHSGDSAC +P  ++S   +D I   T  +AK LNV GLM
Sbjct: 762  SDGT-RTFIGGVMEHIEQAGVHSGDSACSLPPYSLSQPTIDEIKRQTSLMAKGLNVVGLM 820

Query: 925  NCQYAIT------TSGD-VYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLG 977
            N Q+AI        S D V++LE NPRASRTVPFVSKA G  LAK AA  M G+SL+  G
Sbjct: 821  NVQFAIQQQVIDGVSQDVVFVLEVNPRASRTVPFVSKATGLQLAKIAARCMVGQSLDSQG 880

Query: 978  FTKEVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQK 1037
               EV+P + SVKEAV PF KF G D +LGPEM+STGEVMG+  +F  AF K+Q+ AG K
Sbjct: 881  IYDEVVPGYFSVKEAVFPFVKFPGVDTILGPEMKSTGEVMGVGKTFGEAFVKSQLGAGVK 940

Query: 1038 LPLSGTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGR 1097
            LP SG VFLS+    KP   +IA A ++IGF +V+T GTA  +   GI V  V K+ EGR
Sbjct: 941  LPSSGQVFLSVKGSDKPRAVKIAAALVNIGFSVVATKGTAAAIREAGIVVTTVNKVVEGR 1000

Query: 1098 PHAGDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSL 1157
            PH  DM+ N +I +++ T         D   +R   LA +V   TT++GA A    +  L
Sbjct: 1001 PHVVDMIKNNEIALVINTVEEKRNAITDSRAIRTSALAARVTTYTTIAGAEAAVAGMAHL 1060


>gi|340787687|ref|YP_004753152.1| carbamoyl-phosphate synthase large chain [Collimonas fungivorans
            Ter331]
 gi|340552954|gb|AEK62329.1| Carbamoyl-phosphate synthase large chain [Collimonas fungivorans
            Ter331]
          Length = 1073

 Score = 1267 bits (3278), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 639/1075 (59%), Positives = 809/1075 (75%), Gaps = 25/1075 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KR+DL+ ILI+GAGPI+IGQACEFDYSG QACKAL+EEGY+VIL+NSNPATIMTDP +AD
Sbjct: 3    KRSDLKSILIIGAGPIIIGQACEFDYSGAQACKALREEGYKVILVNSNPATIMTDPEMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+T + VE+++ KE+PDA+LPTMGGQTALN A+ L   G LEKY VELIGA  +A
Sbjct: 63   VTYIEPITWQAVERIIAKEKPDAILPTMGGQTALNCALDLHRHGVLEKYKVELIGASPEA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  FK AM  IG+ +  SG+ +T++E   +  E+G FP+IIRP+FT+GGTGGGI
Sbjct: 123  IDKAEDRSKFKAAMTKIGLGSARSGVAHTMEESWGVQKELG-FPVIIRPSFTMGGTGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN EEFE ICK GL AS T ++L+E+SL+GWKEYE+EV+RD ADN +I+CSIEN+DPMG
Sbjct: 182  AYNAEEFETICKRGLEASPTKELLIEESLIGWKEYEMEVVRDKADNCIIVCSIENLDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGV+ GGSNVQF+VNP DG ++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQIMRNASLAVLREIGVDTGGSNVQFSVNPADGRMIVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VG++LD++ N+IT   TPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKIAAKLAVGFTLDELRNEITGGATPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            FAFEKFP ++  LTTQMKSVGE MA+GRTFQESFQKALR LE G  G     + E   D 
Sbjct: 362  FAFEKFPTADNHLTTQMKSVGEVMAIGRTFQESFQKALRGLEVGVDG-----MNEKTQDR 416

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLL-TQS 565
            E ++  L  P PDR+  +  A  +G  ++E+H+L+ ID WFL+Q KE++D+E +L  +Q+
Sbjct: 417  EVIEEELGEPGPDRIWYVGDAFAQGFTLEEVHQLTHIDPWFLSQIKEIVDIELWLENSQT 476

Query: 566  VSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANT 625
            +  + +D  + +K++GF D+++A   K+T+ +VR+KRL+L + P YKRVDTCA EF  NT
Sbjct: 477  LEALDRDTLFRLKQKGFGDRRLAKLLKTTDTDVRKKRLALNIRPVYKRVDTCAGEFSTNT 536

Query: 626  PYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNS 685
             YMYS+Y+ ECES PT KKK+++LGGGPNRIGQGIEFDYCC H + +++  GYETIM+N 
Sbjct: 537  AYMYSTYEEECESNPTNKKKIMVLGGGPNRIGQGIEFDYCCVHAALAMREDGYETIMVNC 596

Query: 686  NPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEH 745
            NPETVSTDYDTSDRLYFEP+T+EDVL ++D E+P G+IVQ+GGQTPLKL+L +       
Sbjct: 597  NPETVSTDYDTSDRLYFEPVTLEDVLEIVDKEKPYGVIVQYGGQTPLKLALDLE------ 650

Query: 746  RLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEI 805
                A+G   V I GTSPD IDAAEDRERF  ++ +L++ QP    A++E DAL +A+EI
Sbjct: 651  ----ANG---VPIVGTSPDMIDAAEDRERFQKLLHDLNLRQPPNRTARTEEDALRLAQEI 703

Query: 806  GYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALA 865
            GYP+VVRPSYVLGGRAMEIV+    L  Y+  AV+V  + PVL+D++L+DAIE+DVD L+
Sbjct: 704  GYPLVVRPSYVLGGRAMEIVHEQRDLERYMREAVKVSHDSPVLLDRFLNDAIEVDVDCLS 763

Query: 866  DSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMN 925
            D      IGG+MEHIEQAGVHSGDSAC +P  ++S + ++ I   T  +AK LNV GLMN
Sbjct: 764  DG-ERTFIGGVMEHIEQAGVHSGDSACSLPPYSLSQATIEEIKRQTSLMAKGLNVVGLMN 822

Query: 926  CQYAITT---SGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEV 982
             Q+AI        V++LE NPRASRTVPFVSKA G  LAK AA  M G+SL+  G   EV
Sbjct: 823  VQFAIQQIDGQDVVFVLEVNPRASRTVPFVSKATGLQLAKIAARCMVGQSLDSQGIKDEV 882

Query: 983  IPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSG 1042
            +PK+ SVKEAV PF KF G D +LGPEM+STGEVMG+  +F  AF K+Q+ AG KLP SG
Sbjct: 883  VPKYFSVKEAVFPFVKFPGVDTILGPEMKSTGEVMGVGKTFGEAFVKSQLGAGIKLPKSG 942

Query: 1043 TVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGD 1102
             VFLS+    KP   ++AK  + IGF +V+T GTA  +   GI VE V K+ EGRPH  D
Sbjct: 943  KVFLSVKGSDKPRAVQVAKDLVAIGFSVVATKGTAAAISAAGIPVETVNKVVEGRPHVVD 1002

Query: 1103 MVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSL 1157
            M+ N +I +++ T        +D   +R   LA      TT++GA A  E +R L
Sbjct: 1003 MIKNNEISLVINTVEEKRSAIVDSRAIRTSALAAHATTYTTIAGAEAAVEGMRHL 1057


>gi|296532782|ref|ZP_06895461.1| carbamoyl-phosphate synthase, large subunit [Roseomonas cervicalis
            ATCC 49957]
 gi|296266890|gb|EFH12836.1| carbamoyl-phosphate synthase, large subunit [Roseomonas cervicalis
            ATCC 49957]
          Length = 1081

 Score = 1267 bits (3278), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 626/1097 (57%), Positives = 812/1097 (74%), Gaps = 35/1097 (3%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILI+GAGPIVIGQACEFDYSG QACKAL+ EGY VIL+NSNPATIMTDPGLAD
Sbjct: 3    KRTDIKSILIIGAGPIVIGQACEFDYSGAQACKALRAEGYRVILVNSNPATIMTDPGLAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+T E+VE+++ KERPDALLPTMGGQTALN ++ LAE+G LEKYG ELIGAK + 
Sbjct: 63   ATYIEPITVEMVEKIIAKERPDALLPTMGGQTALNTSLKLAEAGVLEKYGCELIGAKAEV 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  F+ AM  IG+++P S I +T++E  +   E+ + P +IRP+FTLGGTGGGI
Sbjct: 123  IDKAEDRLKFRDAMTKIGIESPRSAIAHTMEEARA-GLELVKLPCVIRPSFTLGGTGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEFE I  AGL+AS+T++VL+E+S+LGWKEYE+EV+RD ADN +I+CSIENVDPMG
Sbjct: 182  AYNREEFEQIVAAGLSASMTNEVLIEESVLGWKEYEMEVVRDSADNCIIVCSIENVDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDS+TVAPA TLTDKEYQR+RD SIA +REIGV+ GGSNVQF +NP DG ++VIEMN
Sbjct: 242  VHTGDSVTVAPALTLTDKEYQRMRDASIACLREIGVDTGGSNVQFGINPADGRMVVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRF 447
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT  TPA+FEP+IDYVV KIPRF
Sbjct: 302  PRVSRSSALASKATGFPIAKIAAKLAVGYTLDELKNDITMVTPAAFEPTIDYVVIKIPRF 361

Query: 448  AFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDWE 507
             FEKFPG+   LTT MKSVGEAMA+GR+F E+ QK LRSLE G SG      +  D   E
Sbjct: 362  TFEKFPGTPATLTTSMKSVGEAMAIGRSFNEALQKGLRSLETGLSGLD-EIPQPGDGSKE 420

Query: 508  QLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFL----LT 563
                +L  P PDR+  +  A++ G+ VDEIHE    + WF+ + ++++  E+ +    L 
Sbjct: 421  AHIAALATPKPDRLLVVAQALRAGLTVDEIHEACRFEPWFIREVEKIVRAEEAIREGGLP 480

Query: 564  QSVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEA 623
            Q  + + +     +K  GFSDK+++  T  +E  V ++RL LGV+P YKR+DTCAAEF +
Sbjct: 481  QDATGLRR-----IKAMGFSDKRLSVLTGQSEAAVLQQRLKLGVLPVYKRIDTCAAEFAS 535

Query: 624  NTPYMYSSYDF-----ECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGY 678
            +TPYMYS+Y+      ECES PT +KK++ILGGGPNRIGQGIEFDYCC H +++L+ AG+
Sbjct: 536  DTPYMYSTYEGGFGTPECESRPTDRKKIVILGGGPNRIGQGIEFDYCCVHAAYALREAGF 595

Query: 679  ETIMMNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPE----GIIVQFGGQTPLKL 734
            ET+M+N NPETVSTDYDTSDRLYFEPL+ EDV+++I  E+ +    G IVQ+GGQTPLKL
Sbjct: 596  ETVMVNCNPETVSTDYDTSDRLYFEPLSAEDVISLIRKEQEKGEVLGCIVQYGGQTPLKL 655

Query: 735  SLPIHQYLDEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKS 794
            S  +H+               + I GTS ++ID AEDRERF  ++K L ++QP+ GI ++
Sbjct: 656  SQALHK-------------AGIPILGTSAEAIDIAEDRERFQQLLKSLGLQQPQNGIVRT 702

Query: 795  EADALAIAKEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLS 854
              +A+  A+ IGYPVVVRPSYVLGGRAMEI Y  E L+ + + AV+V  E P+LID+YL 
Sbjct: 703  LEEAVEEAERIGYPVVVRPSYVLGGRAMEIAYNREQLLRFGQEAVKVSGENPILIDQYLQ 762

Query: 855  DAIEIDVDALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKL 914
            DAIE+DVD +AD  G V + G+MEHIE+AG+HSGDSAC +P  +++ S +  + + T  +
Sbjct: 763  DAIEVDVDCIADEDGQVYVAGVMEHIEEAGIHSGDSACSLPPYSLAPSVITELKAETEAM 822

Query: 915  AKRLNVCGLMNCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLN 974
            A+ L V GLMN QYA+   G++++LE NPRASRTVPFV+KA G P+AK  A VM+G  L+
Sbjct: 823  ARALKVRGLMNVQYAV-KDGEIFVLEVNPRASRTVPFVAKATGVPVAKIGARVMAGARLS 881

Query: 975  DLGFTKEVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAA 1034
            +     E + +HV+VKEAV PF +F   DV+LGPEM+STGEVMG+D SF  AFAK+Q+ A
Sbjct: 882  EFKLDDEAVSRHVAVKEAVFPFNRFPNVDVILGPEMKSTGEVMGLDASFERAFAKSQLGA 941

Query: 1035 GQKLPLSGTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMH 1094
            G KLPL+GT F+S+ D  K     +A+   +IGF++++T GTA  L   G+ V  V K+ 
Sbjct: 942  GVKLPLAGTAFISVKDSDKKATVFLARRLTEIGFQVMATRGTAAVLREAGLTVSVVNKVM 1001

Query: 1095 EGRPHAGDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAI 1154
            EGRPH  D + NG+IQ +V+ ++G      D   +RR  L   VP  TT++GA A   AI
Sbjct: 1002 EGRPHCVDAIRNGEIQ-LVVNTTGTGQAVADSFDIRRGALTQGVPHYTTMAGARAAVHAI 1060

Query: 1155 RSLKSNTVTMTALQDFF 1171
             +LK+ T+ +  LQ +F
Sbjct: 1061 AALKAGTLDVAPLQAYF 1077


>gi|221066103|ref|ZP_03542208.1| carbamoyl-phosphate synthase, large subunit [Comamonas testosteroni
            KF-1]
 gi|220711126|gb|EED66494.1| carbamoyl-phosphate synthase, large subunit [Comamonas testosteroni
            KF-1]
          Length = 1083

 Score = 1267 bits (3278), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 632/1084 (58%), Positives = 802/1084 (73%), Gaps = 30/1084 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KR DL+ ILI+GAGPIVIGQACEFDYSG QACKAL+EEGY+VILINSNPATIMTDP  AD
Sbjct: 3    KRNDLKSILIIGAGPIVIGQACEFDYSGVQACKALREEGYKVILINSNPATIMTDPATAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+T + VE+++ KERPDA+LPTMGGQTALN A+ L ++G L+KY VELIGAK +A
Sbjct: 63   VTYIEPITWQTVEKIIAKERPDAILPTMGGQTALNCALDLWKNGVLDKYKVELIGAKPEA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  FK AM  IG+ +  SGI +++DE  ++  ++G FP +IRP+FTLGGTGGGI
Sbjct: 123  IDKAEDRLKFKDAMTKIGLGSARSGIAHSMDEAWAVQKQMG-FPTVIRPSFTLGGTGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN EEFE ICK GL AS T+++L+E+SLLGWKEYE+EV+RD ADN +I+CSIEN+DPMG
Sbjct: 182  AYNPEEFETICKRGLEASPTNELLIEESLLGWKEYEMEVVRDTADNCIIVCSIENLDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGV+ GGSNVQF+VNP DG ++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQIMRNASLAVLREIGVDTGGSNVQFSVNPKDGRMIVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VG++LD++ N+IT  KTPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKIAAKLAVGFTLDELKNEITGGKTPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            FAFEKFP ++  LTTQMKSVGE MA+GRTFQESFQKALR LE G  G     + E   D 
Sbjct: 362  FAFEKFPAADNRLTTQMKSVGEVMAIGRTFQESFQKALRGLEVGVDG-----MNEKTQDR 416

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLT--- 563
            E L+  L  P PDR+  +  A   G  +DE+H ++ IDKWFL Q +E++ +E  L     
Sbjct: 417  EILEKELGEPGPDRIWYVGDAFAAGWSLDEVHNITKIDKWFLVQIEEIVKIELELDKLYE 476

Query: 564  ----QSVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAA 619
                 +++ +       +K++GFSD+++A    +++K VRE R +L V P +KRVDTCAA
Sbjct: 477  EKGEGALAALDAQTLRSLKQKGFSDRRLAKLLHTSDKAVREARKALKVRPVFKRVDTCAA 536

Query: 620  EFEANTPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYE 679
            EF +NT YMYS+YD ECE+APT KKK+++LGGGPNRIGQGIEFDYCC H + +++  GYE
Sbjct: 537  EFASNTAYMYSTYDEECEAAPTDKKKIMVLGGGPNRIGQGIEFDYCCVHAAMAMREDGYE 596

Query: 680  TIMMNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIH 739
            TIM+N NPETVSTDYDTSDRLYFEPLT+EDVL ++D+E+PEG+IVQ+GGQTPLKL+L + 
Sbjct: 597  TIMVNCNPETVSTDYDTSDRLYFEPLTLEDVLEIVDVEQPEGVIVQYGGQTPLKLALGLE 656

Query: 740  QYLDEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADAL 799
            +            +G V+I GT+PD IDAAEDRERF  ++ EL + QP    A++EA+AL
Sbjct: 657  R------------EG-VKIIGTTPDMIDAAEDRERFQKLLNELGLRQPPNATARTEAEAL 703

Query: 800  AIAKEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEI 859
              A  +GYP+VVRPSYVLGGRAMEIV+    L  Y+  AV+V  + PVL+D +LS+AIE 
Sbjct: 704  EKAAGLGYPLVVRPSYVLGGRAMEIVHEQRDLERYMREAVKVSNDSPVLLDHFLSNAIEC 763

Query: 860  DVDALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLN 919
            DVD + D  G V IGG+MEHIEQAGVHSGDSAC +P   + +  +  I   T  +A+ L+
Sbjct: 764  DVDCVRDKTGAVYIGGVMEHIEQAGVHSGDSACSLPPYYLKAETVAEIKRQTAAMAEGLH 823

Query: 920  VCGLMNCQYAITTSGD---VYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDL 976
            V GLMN Q+AI  +     +Y+LE NPRASRTVPFVSKA G  LAK AA  M+G++L + 
Sbjct: 824  VVGLMNVQFAIKEADGQDVIYVLEVNPRASRTVPFVSKATGVQLAKVAARCMAGQTLAEQ 883

Query: 977  GFTKEVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQ 1036
            G TKEV P + SVKEAV PF KF G D +LGPEM+STGEVMG+  +F  AF K+Q+ AG 
Sbjct: 884  GITKEVTPPYFSVKEAVFPFVKFPGVDTILGPEMKSTGEVMGVGKTFGEAFVKSQMGAGV 943

Query: 1037 KLPLSGTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEG 1096
             LP  G VFLS+ +  K     +AK    +G+ + +T GTA  +   GI V+ V K+ EG
Sbjct: 944  HLPAEGKVFLSVKNNDKTRAVAVAKELAAMGYSLCATRGTATAIAEAGIEVQTVNKVTEG 1003

Query: 1097 RPHAGDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRS 1156
            RPH  DM+ NG+I +++ T         D  ++R   L  +V   TT+ GA A  E +++
Sbjct: 1004 RPHIVDMIKNGEIALVINTVEERRNAIADSRQIRTSALLARVTTFTTIFGAEAAVEGMKA 1063

Query: 1157 LKSN 1160
            ++ +
Sbjct: 1064 MRGS 1067


>gi|407933836|ref|YP_006849479.1| hypothetical protein M3Q_3161 [Acinetobacter baumannii TYTH-1]
 gi|407902417|gb|AFU39248.1| hypothetical protein M3Q_3161 [Acinetobacter baumannii TYTH-1]
          Length = 1076

 Score = 1266 bits (3277), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 628/1080 (58%), Positives = 799/1080 (73%), Gaps = 36/1080 (3%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILI+GAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIKSILIIGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPSMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+T + V Q++EKERPDA+LPTMGGQTALN A+AL E+G LEKYGVELIGA  +A
Sbjct: 63   ATYIEPITWQTVAQIIEKERPDAVLPTMGGQTALNCALALDENGVLEKYGVELIGATKEA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I+KAEDR LF +AM+ IG++ P + I  T++E + I +  G FP+IIRP+FT+GG+GGGI
Sbjct: 123  IEKAEDRKLFDEAMRKIGLECPKAAIAETMEEALEIQSRFG-FPVIIRPSFTMGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEF  IC+ G   S T Q+L+++SL+GWKEYE+EV+RD  DN +I+C+IEN DPMG
Sbjct: 182  AYNREEFLEICERGFDLSPTHQLLIDESLIGWKEYEMEVVRDKNDNCIIVCAIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGVE GGSNVQF +NP DG ++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQLMRNASVAVLREIGVETGGSNVQFGINPKDGRMVVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKK-TPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT   TPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKIAAKLAVGYTLDELKNDITGGVTPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGW------GCSNVK 500
            F FEKFP +EP+LTTQMKSVGE MA+GR FQES QKALR LE G SG+      G +NVK
Sbjct: 362  FNFEKFPQAEPVLTTQMKSVGEVMAIGRNFQESVQKALRGLEVGVSGFDEKVEAGATNVK 421

Query: 501  ELDWDWEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQF 560
                  E +   L+VP P+R+  +  A + G  +D++ E + ID+WFL Q +++++ E  
Sbjct: 422  ------ETILKELKVPGPERIWYVADAFRHGFSLDDVFEATKIDRWFLIQIQDIVNTEAQ 475

Query: 561  LLTQSVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAE 620
            + T    ++T ++    KR+G SD +IA     ++K+ R+ R +LGV P YKRVDTCAAE
Sbjct: 476  VKTLGFGDLTAENIRSFKRKGLSDLRIANLMGISQKQFRKHRWNLGVYPVYKRVDTCAAE 535

Query: 621  FEANTPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYET 680
            FE+ T YMYS+YD ECE+ P+ + K++++GGGPNRIGQGIEFDYCC H + +++  GYET
Sbjct: 536  FESGTAYMYSTYDEECEANPSNRDKIMVIGGGPNRIGQGIEFDYCCVHAALAMREDGYET 595

Query: 681  IMMNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQ 740
            IM+N NPETVSTDYDTSDRLYFEP+T+EDVL ++  E+P+G+IVQ+GGQTPLKL+    +
Sbjct: 596  IMVNCNPETVSTDYDTSDRLYFEPVTLEDVLEIVRTEKPKGVIVQYGGQTPLKLA----R 651

Query: 741  YLDEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALA 800
             L+E   P         I GTSPD+ID AEDRERF  +I+ L + QP   I KS  + ++
Sbjct: 652  ALEEAGTP---------IIGTSPDAIDRAEDRERFQQMIQRLQLRQPNNSIVKSAEEGIS 702

Query: 801  IAKEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEID 860
             A ++GYP+VVRPSYVLGGRAMEIVY ++ L  YL  AV+   E PVL+D +L DA E+D
Sbjct: 703  EAAKVGYPLVVRPSYVLGGRAMEIVYNEDELKRYLREAVQASNEAPVLLDHFLDDATEVD 762

Query: 861  VDALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNV 920
            VD ++D   +VVIGGIM+HIEQAG+HSGDSAC IP  ++S    D +   TI +AK L V
Sbjct: 763  VDCVSDG-KDVVIGGIMQHIEQAGIHSGDSACSIPPYSLSKEIQDEMRRQTIAMAKELGV 821

Query: 921  CGLMNCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTK 980
             GLMN Q+A+    D+Y+LE NPRASRTVPFVSK IG  LAK AA  M+G+SL   GFTK
Sbjct: 822  VGLMNVQFAV-KGNDIYVLEVNPRASRTVPFVSKCIGESLAKVAARCMAGQSLESQGFTK 880

Query: 981  EVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQK--- 1037
            E+IP   +VKEAV PF KF G D +LGPEM+STGEVMG+  +F  AF KA + +  +   
Sbjct: 881  EIIPNRFAVKEAVFPFAKFPGVDPMLGPEMKSTGEVMGVGQTFGEAFYKAVLGSNDRLPG 940

Query: 1038 LPLSGTV---FLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMH 1094
            LP  G V   FLS+ +  K ++  IAK  ++ GFK+V+T GT   L+  G+  E V K+ 
Sbjct: 941  LPTEGEVKHAFLSVRESDKKYIADIAKKLVEYGFKLVATGGTYQVLKEAGLECESVNKVT 1000

Query: 1095 EGRPHAGDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAI 1154
            EGRPH  D + NG+I ++V T+ G    Q D   +RR  L  KV   TT++GA A  +A 
Sbjct: 1001 EGRPHIVDRLKNGEIHLIVNTTEGKQA-QYDSAMIRRAALQGKVYYTTTINGAEAVCQAF 1059


>gi|408822699|ref|ZP_11207589.1| carbamoyl phosphate synthase large subunit [Pseudomonas geniculata
            N1]
          Length = 1080

 Score = 1266 bits (3277), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 630/1068 (58%), Positives = 803/1068 (75%), Gaps = 21/1068 (1%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTDL+ ILI+GAGPIVIGQACEFDYSG QACKAL++EGY V+L+NSNPATIMTDP +AD
Sbjct: 3    KRTDLKTILIIGAGPIVIGQACEFDYSGAQACKALRDEGYRVVLVNSNPATIMTDPEMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
              YI P+  + VE+++ KE+PDALLPTMGGQTALN A+ LA++G LEKY VELIGAK +A
Sbjct: 63   AVYIEPINWQTVEKIIAKEKPDALLPTMGGQTALNCALDLADNGVLEKYNVELIGAKREA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I+ AEDR+LF+ AM  IG++ P + + +TLDE + I   +G +P IIRP+FTLGG+GGGI
Sbjct: 123  IRMAEDRELFRVAMGEIGLECPTAAVAHTLDEALEIQTRVG-YPTIIRPSFTLGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EE   I   GL  S T++VLVE+S+LGWKE+E+EV+RD ADN +I+CSIEN+DPMG
Sbjct: 182  AYNREELVEIVSRGLELSPTTEVLVEESVLGWKEFEMEVVRDTADNCIIVCSIENLDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQRLRD SIA++R+IGV+ GGSNVQF +NP  G V+VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQRLRDASIAVLRKIGVDTGGSNVQFGINPKTGRVVVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKK-TPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ N+IT   TPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGYTLDELKNEITGGLTPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVK-ELDWD 505
            FAFEKFP ++  LTTQMKSVGE MA+GRTFQES QKALR LE G  G+  + +    + D
Sbjct: 362  FAFEKFPAADARLTTQMKSVGEVMAMGRTFQESVQKALRGLETGKVGFDPTGLDLANEED 421

Query: 506  WEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQS 565
             + L+  L+ P P+R+  +  A + GM V+EI+ LSFID WFL Q +E+I  E  +    
Sbjct: 422  LQTLRRELKAPGPERLFFVADAFRAGMSVEEIYALSFIDHWFLDQIEEIIAAEAEVTAGG 481

Query: 566  VSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANT 625
            +  +      ++KR GFSD ++A  T + E  +R  R +  V P YKRVD+CA EF   T
Sbjct: 482  IDALDAARLRKLKRAGFSDARLAQLTGTNEAAIRALRRAHKVRPVYKRVDSCAGEFSTGT 541

Query: 626  PYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNS 685
             Y+YS+Y+ ECE+AP+ + K++ILGGGPNRIGQGIEFDYCC H + +L+  GYETIM+N 
Sbjct: 542  AYLYSTYEDECEAAPSNRDKIMILGGGPNRIGQGIEFDYCCVHAALALREDGYETIMVNC 601

Query: 686  NPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEH 745
            NPETVSTDYDTSDRLYFEPLT+EDVL +++LE+P+G+IVQ+GGQTPLKL+          
Sbjct: 602  NPETVSTDYDTSDRLYFEPLTLEDVLEIVELEQPKGVIVQYGGQTPLKLA---------- 651

Query: 746  RLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEI 805
            R   A+G   V + GTSPDSID AEDRERF  ++ +L ++QP   IA+++ +AL +A+EI
Sbjct: 652  RALEANG---VPVIGTSPDSIDLAEDRERFQQLVDKLGLKQPPNRIARNDQEALLLAREI 708

Query: 806  GYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALA 865
            GYP+VVRPSYVLGGRAMEIVY +  L  Y+ +AV+V  + PVL+D++L +A+E DVD +A
Sbjct: 709  GYPLVVRPSYVLGGRAMEIVYGEADLARYVRDAVKVSNDSPVLLDRFLDNAVECDVDIIA 768

Query: 866  DSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMN 925
            D  GNV+IGG+MEHIE+AGVHSGDS+C +P  ++S+     +    ++LAK LNV GLMN
Sbjct: 769  DKDGNVLIGGVMEHIEEAGVHSGDSSCSLPPYSLSAETQAELRRQVVELAKALNVVGLMN 828

Query: 926  CQYAITTSGD----VYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKE 981
             Q+AI TS +    +YLLE NPRASRTVPFVSKA G PLAK AA  M+GKSL + G TKE
Sbjct: 829  TQFAIQTSDEGADTIYLLEVNPRASRTVPFVSKATGMPLAKIAARCMAGKSLAEQGATKE 888

Query: 982  VIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLS 1041
            ++P + SVKEA+ PF KFQG D +LGPEMRSTGEVMG+  +F  AFA+AQ A G K P  
Sbjct: 889  IVPDYYSVKEAIFPFAKFQGVDPILGPEMRSTGEVMGVGRTFNAAFARAQEAGGIKAPPV 948

Query: 1042 GTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAG 1101
            G  F+S+ D  K  +  +AKA L  G+ +V+T GTA +L+  G+  E + K+ EGRPH  
Sbjct: 949  GKAFVSVRDPDKKRVLPVAKALLARGYSLVATRGTAAWLQQHGMDCEIINKVVEGRPHIV 1008

Query: 1102 DMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALA 1149
            D + NG+I  +V T+ G S    D   +RR  L ++V   TT++GA A
Sbjct: 1009 DSIKNGEIVYIVNTTEGRSAIN-DSFSIRREALQHRVTYSTTIAGAKA 1055


>gi|260549216|ref|ZP_05823436.1| carbamoyl-phosphate synthase large subunit [Acinetobacter sp.
            RUH2624]
 gi|424054539|ref|ZP_17792063.1| carbamoyl-phosphate synthase large chain [Acinetobacter nosocomialis
            Ab22222]
 gi|425741266|ref|ZP_18859418.1| carbamoyl-phosphate synthase, large subunit [Acinetobacter baumannii
            WC-487]
 gi|260407622|gb|EEX01095.1| carbamoyl-phosphate synthase large subunit [Acinetobacter sp.
            RUH2624]
 gi|407439288|gb|EKF45813.1| carbamoyl-phosphate synthase large chain [Acinetobacter nosocomialis
            Ab22222]
 gi|425492993|gb|EKU59241.1| carbamoyl-phosphate synthase, large subunit [Acinetobacter baumannii
            WC-487]
          Length = 1076

 Score = 1266 bits (3276), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 627/1080 (58%), Positives = 797/1080 (73%), Gaps = 36/1080 (3%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILI+GAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIKSILIIGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPSMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+T + V Q++EKERPDA+LPTMGGQTALN A+AL E+G L KY VELIGA  +A
Sbjct: 63   ATYIEPITWQTVAQIIEKERPDAVLPTMGGQTALNCALALDENGVLAKYNVELIGATKEA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I+KAEDR LF  AM+ IG++ P + I  T++E + I +  G FP+IIRP+FT+GG+GGGI
Sbjct: 123  IEKAEDRKLFDIAMRKIGLECPKAAIAETMEEALEIQSRFG-FPVIIRPSFTMGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEF  IC+ G   S T Q+L+++SL+GWKEYE+EV+RD  DN +I+C+IEN DPMG
Sbjct: 182  AYNREEFLEICERGFDLSPTHQLLIDESLIGWKEYEMEVVRDKNDNCIIVCAIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGVE GGSNVQF +NP DG ++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQLMRNASVAVLREIGVETGGSNVQFGINPKDGRMVVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKK-TPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT   TPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKIAAKLAVGYTLDELKNDITGGVTPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGW------GCSNVK 500
            F FEKFP +EP+LTTQMKSVGE MA+GR FQES QKALR LE G SG+      G +NVK
Sbjct: 362  FNFEKFPQAEPVLTTQMKSVGEVMAIGRNFQESVQKALRGLEVGVSGFDEKIEAGATNVK 421

Query: 501  ELDWDWEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQF 560
                  E +   L+VP P+R+  +  A + G  +D++ E + ID+WFL Q ++++  E  
Sbjct: 422  ------ETILKELKVPGPERIWYVADAFRHGFSLDDVFEATKIDRWFLIQIQDIVKTEAQ 475

Query: 561  LLTQSVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAE 620
            + T    ++T ++    KR+G SD +IA     ++K+ R++R +LGV P YKRVDTCAAE
Sbjct: 476  VKTLGFGDLTAENIRSFKRKGLSDLRIANLMGISQKQFRKQRWNLGVYPVYKRVDTCAAE 535

Query: 621  FEANTPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYET 680
            FE+ T YMYS+YD ECE+ P+ + K++++GGGPNRIGQGIEFDYCC H + +++  GYET
Sbjct: 536  FESGTAYMYSTYDEECEANPSNRDKIMVIGGGPNRIGQGIEFDYCCVHAALAMREDGYET 595

Query: 681  IMMNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQ 740
            IM+N NPETVSTDYDTSDRLYFEP+T+EDVL ++  E+P+G+IVQ+GGQTPLKL+    +
Sbjct: 596  IMVNCNPETVSTDYDTSDRLYFEPVTLEDVLEIVRTEKPKGVIVQYGGQTPLKLA----R 651

Query: 741  YLDEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALA 800
             L+E   P         I GTSPD+ID AEDRERF  +I+ L + QP   I KS  + ++
Sbjct: 652  ALEEAGTP---------IIGTSPDAIDRAEDRERFQQMIQRLQLRQPNNSIVKSAEEGIS 702

Query: 801  IAKEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEID 860
             A ++GYP+VVRPSYVLGGRAMEIVY ++ L  YL  AV+   E PVL+D +L DA E+D
Sbjct: 703  EAAKVGYPLVVRPSYVLGGRAMEIVYNEDELKRYLREAVQASNEAPVLLDHFLDDATEVD 762

Query: 861  VDALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNV 920
            VD ++D   +VVIGGIM+HIEQAG+HSGDSAC IP  ++S    D +   T+ +AK L V
Sbjct: 763  VDCVSDG-KDVVIGGIMQHIEQAGIHSGDSACSIPPYSLSKEVQDEMRRQTVAMAKELGV 821

Query: 921  CGLMNCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTK 980
             GLMN Q+A+    D+Y+LE NPRASRTVPFVSK IG  LAK AA  M+G+SL   GFTK
Sbjct: 822  VGLMNVQFAV-KGDDIYVLEVNPRASRTVPFVSKCIGESLAKVAARCMAGQSLESQGFTK 880

Query: 981  EVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPL 1040
            E+IP H +VKEAV PF KFQG D +LGPEM+STGEVMG+  +F  AF KA + +  +LP 
Sbjct: 881  EIIPTHFAVKEAVFPFAKFQGVDPMLGPEMKSTGEVMGVGKTFGEAFYKAVLGSNDRLPG 940

Query: 1041 SGT------VFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMH 1094
              T       FLS+ +  K ++  IAK F+  GFK+V+T GT   L+  G+  E V K+ 
Sbjct: 941  LPTEGEEKIAFLSVRESDKKYIADIAKKFVAYGFKLVATGGTYKVLKEAGLECESVNKVT 1000

Query: 1095 EGRPHAGDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAI 1154
            EGRPH  D + NG+I ++V T+ G    Q D   +RR  L  KV   TT++GA A  +A 
Sbjct: 1001 EGRPHIVDRLKNGEIHLIVNTTEGKQA-QYDSAMIRRAALQGKVYYTTTINGAEAVCQAF 1059


>gi|452851604|ref|YP_007493288.1| Carbamoyl-phosphate synthase large chain [Desulfovibrio piezophilus]
 gi|451895258|emb|CCH48137.1| Carbamoyl-phosphate synthase large chain [Desulfovibrio piezophilus]
          Length = 1078

 Score = 1266 bits (3275), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 637/1092 (58%), Positives = 804/1092 (73%), Gaps = 26/1092 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++KI+++G+GPIVIGQACEFDYSGTQA KALKEEGYEV+L+NSNPA+IMTDP LAD
Sbjct: 3    KRTDIKKIMLIGSGPIVIGQACEFDYSGTQALKALKEEGYEVVLVNSNPASIMTDPELAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+ PE V +++EKERPDALLPT+GGQT LN A+ALAE G LEK+ VELIGA +  
Sbjct: 63   ATYIEPIEPETVARIIEKERPDALLPTLGGQTGLNTALALAEMGVLEKFEVELIGADIPV 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAE R+ F++AM+ IG+  P +GI  T+D+      +I  FP+I+RPA+TLGG+GGG+
Sbjct: 123  INKAESREEFREAMENIGLSMPQAGICRTMDDVREWGQKI-PFPIIVRPAYTLGGSGGGV 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN EE E IC  GLA S+ S++++E+S+LGWKEYELEVMRD  DN VIICSIEN+DPMG
Sbjct: 182  AYNMEELEDICSNGLALSMKSEIMLERSILGWKEYELEVMRDKKDNCVIICSIENLDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTL+D EYQ LR+ S+A++REIGVE GGSNVQFA+NP +GE+++IEMN
Sbjct: 242  VHTGDSITVAPAQTLSDDEYQALRNASLAVMREIGVETGGSNVQFAINPENGEIIIIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRF 447
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD+IPNDIT++T ASFEP+IDY V KIPRF
Sbjct: 302  PRVSRSSALASKATGFPIAKIAAKLAVGYTLDEIPNDITRETMASFEPAIDYCVIKIPRF 361

Query: 448  AFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDWE 507
             FEKFPG+E  LTT MKSVGE MA+GRTF+E+ QK LRSLE G  G G       D D  
Sbjct: 362  TFEKFPGTEDYLTTAMKSVGETMAIGRTFKEALQKGLRSLETGHIGLG-KRFDTCDIDKN 420

Query: 508  QLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLT---- 563
            ++   LR PN +R+ A+  A++ GM  DE+ E + ID WFL QF EL ++E+ L+     
Sbjct: 421  EILRLLRRPNSERIFAVRNALRCGMTEDEVFEATQIDPWFLRQFIELFEMEKELVAFGKK 480

Query: 564  QSVSNMTK---DDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAE 620
            + VS  ++   +   + K  G+SD Q++   K  E  +R  R  LG++P+Y  VDTCAAE
Sbjct: 481  EGVSCESEGMAEMLRKAKEFGYSDPQLSAMWKVGEDAIRSLRKELGIVPTYYLVDTCAAE 540

Query: 621  FEANTPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYET 680
            FEA TPY YS+Y+   E+     KKV+ILGGGPNRIGQGIEFDYCCCH+SF+L+  G ++
Sbjct: 541  FEAYTPYYYSTYETGQENTRDDVKKVVILGGGPNRIGQGIEFDYCCCHSSFTLKEMGVQS 600

Query: 681  IMMNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQ 740
            IM+NSNPETVSTDYDTSD+LYFEPLT EDV+N+++ E+P+G+IVQFGGQTPL L++    
Sbjct: 601  IMVNSNPETVSTDYDTSDKLYFEPLTFEDVMNILEFEKPDGVIVQFGGQTPLNLAI---- 656

Query: 741  YLDEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALA 800
                 RL +A     V + GTSPD+ID AEDRERF   + +L + QP  G A S  +A  
Sbjct: 657  -----RLMNAG----VPLIGTSPDAIDRAEDRERFKQFLNKLHLRQPSNGTAMSMVEARE 707

Query: 801  IAKEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEID 860
            +A++IG+PVV+RPSYVLGGR M+IVYT +    Y  ++  V PE P LIDK+L  AIE+D
Sbjct: 708  VAEKIGFPVVLRPSYVLGGRGMDIVYTMDEFEEYFRSSARVSPEHPTLIDKFLEYAIEVD 767

Query: 861  VDALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNV 920
            VDALAD    V IGG+MEHIE+AG+HSGDSA ++P  ++S+  +  I   TI +A  L V
Sbjct: 768  VDALADG-EEVYIGGVMEHIEEAGIHSGDSASVLPPYSLSAEMVREIERQTIAMAMELGV 826

Query: 921  CGLMNCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTK 980
             GLMN Q+AI   G+VY++E NPRASRTVPFVSKA G PLAK A  VM G+ L DL    
Sbjct: 827  VGLMNVQFAI-KDGEVYIIEVNPRASRTVPFVSKATGVPLAKLATRVMLGEKLKDLKPAA 885

Query: 981  EVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPL 1040
                 HVSVKE+V PF +F   DVLLGPEMRSTGEVMGID SF +A+ K+Q+AAGQKLP 
Sbjct: 886  MRKRGHVSVKESVFPFNRFPNVDVLLGPEMRSTGEVMGIDPSFGLAYMKSQLAAGQKLPT 945

Query: 1041 SGTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEG-RPH 1099
             GTVF+S+ND  K  L  +A+ F  +GFK+ +T GTA FL  KGI V +V K+HEG RPH
Sbjct: 946  EGTVFISVNDWDKSKLVLVARDFEAMGFKVAATGGTADFLIEKGIKVNKVHKVHEGQRPH 1005

Query: 1100 AGDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKS 1159
              D + NG   +++ T SG      D   +R+  L Y +P  TTVSGA A  +AI  L+ 
Sbjct: 1006 VVDHIKNGDFDLVINTPSGKKTVG-DAKMIRQNTLLYDIPYTTTVSGARAVVQAIHELRE 1064

Query: 1160 NTVTMTALQDFF 1171
            N + + +LQ ++
Sbjct: 1065 NGLKVQSLQKYY 1076


>gi|444921647|ref|ZP_21241482.1| Carbamoyl-phosphate synthase large chain [Wohlfahrtiimonas
            chitiniclastica SH04]
 gi|444507374|gb|ELV07551.1| Carbamoyl-phosphate synthase large chain [Wohlfahrtiimonas
            chitiniclastica SH04]
          Length = 1072

 Score = 1266 bits (3275), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 621/1071 (57%), Positives = 805/1071 (75%), Gaps = 22/1071 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTDL+ ILI+GAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDLKSILIIGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  + VE+++ KERPDA+LPTMGGQTALN A+ L+ +G L KY VELIGA  DA
Sbjct: 63   VTYIEPILWQTVEKIIAKERPDAILPTMGGQTALNCALDLSRNGVLAKYNVELIGASEDA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  FK+AM+ IG+K P S + ++++E +S   ++G FP +IRP+FT+GG+GGGI
Sbjct: 123  IDKAEDRGRFKEAMEKIGLKCPESYVCHSMNEALSAQAKVG-FPTLIRPSFTMGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYNKEEF AIC+ G  AS T ++L+E+S+LGWKEYE+EV+RD ADN +IICSIEN DPMG
Sbjct: 182  AYNKEEFMAICERGFDASPTHELLIEQSVLGWKEYEMEVVRDKADNAIIICSIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGV+ GGSNVQF+VNP +GE++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQIMRNASLAVLREIGVDTGGSNVQFSVNPANGELIVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+L+++ NDIT  +TPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGYTLNELSNDITGGRTPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            FAFEKFP ++  LTTQMKSVGE MA+GRT QES QKALR LE G  G+          D 
Sbjct: 362  FAFEKFPAADDRLTTQMKSVGEVMAMGRTLQESMQKALRGLETGLCGFNPRTT-----DK 416

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
              +   L  P P+R+  +  A + GM  +EI ++  ID WFL Q ++L+  E  +   ++
Sbjct: 417  SVILRELVNPGPERILYVADAFRIGMSKEEIFDVCAIDPWFLMQIEDLMQEEAKVAAGTL 476

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
            +++       +KR+GFSDK+++     +EK VR+ R +L + P YKRVDTCAAEF+ +T 
Sbjct: 477  ADLDFATMRRLKRKGFSDKRLSQLLNVSEKAVRDARFALKLHPVYKRVDTCAAEFDTDTA 536

Query: 627  YMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSN 686
            Y+YS+Y+ ECE+ PT KKK++ILGGGPNRIGQGIEFDYCC H S +L+ +G+ETIM+N N
Sbjct: 537  YLYSTYEEECEARPTDKKKIMILGGGPNRIGQGIEFDYCCVHASLALRESGFETIMVNCN 596

Query: 687  PETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHR 746
            PETVSTD+DTSDRLYFEPLT+EDVL ++ +E+P G+IV +GGQTPLKL+           
Sbjct: 597  PETVSTDFDTSDRLYFEPLTLEDVLEIVRVEQPYGVIVHYGGQTPLKLA----------- 645

Query: 747  LPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEIG 806
              +A  +  V I GTS DSIDAAEDRERF  ++ +L + QP+   A++E +A+ +A E+G
Sbjct: 646  --NALVENGVNIIGTSADSIDAAEDRERFQKVLHDLGLRQPENRTARNEEEAIVLANEVG 703

Query: 807  YPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALAD 866
            YP+VVRPSYVLGGRAM++V++D+ L TY+  AV+V  + PVL+D +L+ AIE+DVD ++D
Sbjct: 704  YPLVVRPSYVLGGRAMQVVHSDDELRTYMNEAVQVSEDSPVLLDFFLNHAIEVDVDCVSD 763

Query: 867  SCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNC 926
                VVIGGIM+H+EQAGVHSGDS C +P  ++S+   D I   T  +AK LNV GLMN 
Sbjct: 764  G-QEVVIGGIMQHVEQAGVHSGDSGCSLPPYSLSAEIQDEIRRQTKAMAKALNVVGLMNV 822

Query: 927  QYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPKH 986
            Q+A+     VY+LE NPRASRTVPFVSKA   PLAK AA  M+G SL +  FT EVIP +
Sbjct: 823  QFAVQDDV-VYVLEVNPRASRTVPFVSKATSVPLAKIAARAMAGISLAEQNFTTEVIPDY 881

Query: 987  VSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVFL 1046
             SVKEAV PF KF G DV+LGPEMRSTGEVMG+  +F  A+ KAQ+ AG+++P  G VF+
Sbjct: 882  YSVKEAVFPFMKFPGVDVILGPEMRSTGEVMGVGKTFSEAYLKAQLGAGERVPKVGKVFI 941

Query: 1047 SLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVAN 1106
            S+ D  KP+LE +A+ F + G+ + +T GTA +L  KG  V+ + K+ EGRPH  D + N
Sbjct: 942  SVRDADKPYLETMARNFQEQGYGLCATRGTAQYLTDKGFFVQTIHKVAEGRPHIIDYIKN 1001

Query: 1107 GQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSL 1157
            G+I ++V T   D+    D   +RR  L  ++P+ TT++G  A +E ++S+
Sbjct: 1002 GEIAVVVNTVVSDAQAVKDSHSIRRSALNQRIPLYTTLAGGEAVSEGVKSM 1052


>gi|194365589|ref|YP_002028199.1| carbamoyl phosphate synthase large subunit [Stenotrophomonas
            maltophilia R551-3]
 gi|194348393|gb|ACF51516.1| carbamoyl-phosphate synthase, large subunit [Stenotrophomonas
            maltophilia R551-3]
          Length = 1080

 Score = 1265 bits (3274), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 629/1068 (58%), Positives = 806/1068 (75%), Gaps = 21/1068 (1%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTDL+ ILI+GAGPIVIGQACEFDYSG QACKAL++EGY V+L+NSNPATIMTDP +AD
Sbjct: 3    KRTDLKTILIIGAGPIVIGQACEFDYSGAQACKALRDEGYRVVLVNSNPATIMTDPEMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
              YI P+  + VE+++ KE+PDALLPTMGGQTALN A+ LA++G LEKY VELIGAK +A
Sbjct: 63   AVYIEPINWQTVEKIIAKEKPDALLPTMGGQTALNCALDLADNGVLEKYNVELIGAKREA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I+ AEDR+LF+ AM  IG++ P + + +TLDE + I   +G +P IIRP+FTLGG+GGGI
Sbjct: 123  IRMAEDRELFRVAMGEIGLECPTAAVAHTLDEALEIQTRVG-YPTIIRPSFTLGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EE   I   GL  S T++VLVE+S+LGWKE+E+EV+RD ADN +I+CSIEN+DPMG
Sbjct: 182  AYNREELVDIVSRGLELSPTTEVLVEESVLGWKEFEMEVVRDTADNCIIVCSIENLDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQRLRD SIA++R+IGV+ GGSNVQF +NP  G V+VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQRLRDASIAVLRKIGVDTGGSNVQFGINPDTGRVVVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKK-TPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ N+IT   TPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGYTLDELKNEITGGLTPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDW-D 505
            FAFEKFP ++  LTTQMKSVGE MA+GRTFQES QKALR LE G  G+  + +   +  D
Sbjct: 362  FAFEKFPAADARLTTQMKSVGEVMAMGRTFQESMQKALRGLETGKVGFDPTGLDLTNEDD 421

Query: 506  WEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQS 565
             + L+  L+ P P+R+  +  A + GM V++I +LS+ID WFL Q +E+I  E  +    
Sbjct: 422  LQTLRRELKAPGPERLFFVADAFRAGMSVEDIFKLSYIDPWFLDQIEEIIAAEAAVAADG 481

Query: 566  VSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANT 625
            +  +      ++KR GFSD ++A  T + E  +R  R +  V P YKRVD+CA EF   T
Sbjct: 482  IDALDAARLRKLKRSGFSDARLAQLTGTNEAAIRALRRAHKVRPVYKRVDSCAGEFSTGT 541

Query: 626  PYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNS 685
             Y+YS+Y+ ECE+AP+ + K++ILGGGPNRIGQGIEFDYCC H + +L+  GYETIM+N 
Sbjct: 542  AYLYSTYEDECEAAPSNRDKIMILGGGPNRIGQGIEFDYCCVHAALALREDGYETIMVNC 601

Query: 686  NPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEH 745
            NPETVSTDYDTSDRLYFEPLT+EDVL +++LE+P+G+IVQ+GGQTPLKL+          
Sbjct: 602  NPETVSTDYDTSDRLYFEPLTLEDVLEIVELEQPKGVIVQYGGQTPLKLA---------- 651

Query: 746  RLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEI 805
            R   A+G   V + GTSPDSID AEDRERF  ++  L ++QP   IA+++ +AL +A+EI
Sbjct: 652  RALEANG---VPVIGTSPDSIDLAEDRERFQQLVDNLGLKQPPNRIARNDQEALLLAREI 708

Query: 806  GYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALA 865
            GYP+VVRPSYVLGGRAMEIVY +  L  Y+ +AV+V  + PVL+D++L +A+E+DVD +A
Sbjct: 709  GYPLVVRPSYVLGGRAMEIVYGESDLARYVRDAVKVSNDSPVLLDRFLDNAVEVDVDIIA 768

Query: 866  DSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMN 925
            D+ GNV+IGG+MEHIE+AGVHSGDS+C +P  ++S++    +    ++LAK LNV GLMN
Sbjct: 769  DAQGNVLIGGVMEHIEEAGVHSGDSSCSLPPYSLSAATQAELRRQVVELAKALNVVGLMN 828

Query: 926  CQYAITTS--GD--VYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKE 981
             Q+AI TS  GD  +YLLE NPRASRTVPFVSKA G PLAK AA  M+GK+L + G TKE
Sbjct: 829  TQFAIQTSDEGDDTIYLLEVNPRASRTVPFVSKATGMPLAKIAARCMAGKTLAEQGATKE 888

Query: 982  VIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLS 1041
            ++P + SVKEA+ PF KFQG D +LGPEMRSTGEVMG+  +F  AFA+AQ A G K P  
Sbjct: 889  IVPDYYSVKEAIFPFAKFQGVDPILGPEMRSTGEVMGVGRTFNAAFARAQEAGGIKAPPV 948

Query: 1042 GTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAG 1101
            G  F+S+ D  K  +  +AKA L  G+ +V+T GTA +L+  G+  E + K+ EGRPH  
Sbjct: 949  GKAFVSVRDPDKKRVLPVAKALLARGYSLVATRGTAAWLQQHGMDCEIINKVVEGRPHIV 1008

Query: 1102 DMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALA 1149
            D + NG+I  +V T+ G S    D   +RR  L ++V   TT++GA A
Sbjct: 1009 DSIKNGEIVYIVNTTEGRSAIN-DSFSIRREALQHRVTYSTTIAGAKA 1055


>gi|404378636|ref|ZP_10983725.1| carbamoyl-phosphate synthase large chain [Simonsiella muelleri ATCC
            29453]
 gi|294483762|gb|EFG31446.1| carbamoyl-phosphate synthase large chain [Simonsiella muelleri ATCC
            29453]
          Length = 1074

 Score = 1265 bits (3274), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 625/1084 (57%), Positives = 807/1084 (74%), Gaps = 24/1084 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTDL+ ILI+GAGPIVIGQACEFDYSG QACKAL+EEGY+VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDLKSILIIGAGPIVIGQACEFDYSGAQACKALREEGYKVILVNSNPATIMTDPEMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  + VE+++ KERPDA+LPTMGGQTALN A+ LA +G L KY VELIGA  DA
Sbjct: 63   VTYIEPIMWQTVEKIIAKERPDAILPTMGGQTALNCALDLARNGVLRKYNVELIGASEDA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  FK AM  IG+ TP S I +T++E +    E+G FP +IRP+FT+GG+GGGI
Sbjct: 123  IDKAEDRGRFKDAMAKIGLNTPKSFICHTMNEALRAQEEVG-FPTLIRPSFTMGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYNK+EF AIC+ G  AS T ++L+E+S+LGWKEYE+EV+RD  DN +I+CSIEN DPMG
Sbjct: 182  AYNKDEFLAICERGFDASPTHELLIEQSVLGWKEYEMEVVRDKNDNCIIVCSIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGV+ GGSNVQFAVNP +GE++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQIMRNASLAVLREIGVDTGGSNVQFAVNPANGEMIVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VG++LD++ NDIT  +TPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGFTLDELRNDITGGRTPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            FAFEKFP ++  LTTQMKSVGE MA+GRT QESFQKALR LE G  G+   +      D 
Sbjct: 362  FAFEKFPAADDTLTTQMKSVGEVMAMGRTIQESFQKALRGLETGLCGFNPRST-----DK 416

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
             +++  L  P  +RM  +  A + G  + E++++  ID WFL Q ++L+  EQ + +  +
Sbjct: 417  AEIRRELATPRAERMLFVADAFRAGFSIQEVYDICKIDDWFLAQIEDLVKEEQKISSGCL 476

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
             ++       +KR+GF+DK+IA  +  +EKEVRE R +L + P YKRVDTCAAEF  +T 
Sbjct: 477  KDLDYPTLRRLKRKGFADKRIAQLSNISEKEVREHRYALNLHPIYKRVDTCAAEFATDTA 536

Query: 627  YMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSN 686
            Y+YS+Y+ ECES PT  KKV+ILGGGPNRIGQGIEFDYCC H + +L+ +G+ETIM+N N
Sbjct: 537  YLYSTYEEECESRPTDNKKVMILGGGPNRIGQGIEFDYCCVHAALALRESGFETIMVNCN 596

Query: 687  PETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHR 746
            PETVSTD+DTSDRLYFEPLT+EDVL ++  E P G+IV +GGQTPLKL+           
Sbjct: 597  PETVSTDFDTSDRLYFEPLTLEDVLEIVRKENPWGVIVHYGGQTPLKLA----------- 645

Query: 747  LPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEIG 806
              +A  +  V I GTS DSIDAAEDRERF  ++ +L + QP    A++E +AL +A+EIG
Sbjct: 646  --NALVENGVNIIGTSADSIDAAEDRERFQKVLNDLGLRQPPNRTARAEDEALRLAEEIG 703

Query: 807  YPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALAD 866
            YP+VVRPSYVLGGRAM++V++ E L TY+  AV+V  + PVL+D +L++AIE+DVD ++D
Sbjct: 704  YPLVVRPSYVLGGRAMQVVHSPEQLQTYMREAVQVSEDSPVLLDFFLNNAIEVDVDCVSD 763

Query: 867  SCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNC 926
                VVIGGIM+H+EQAG+HSGDS C +P  ++S    D I   T  +A  LNV GLMN 
Sbjct: 764  G-EEVVIGGIMQHVEQAGIHSGDSGCSLPPYSLSIETQDEIRRQTKAMAFALNVKGLMNV 822

Query: 927  QYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPKH 986
            Q+A+   G V++LE NPRASRTVPFVSKA   PLAK  A  M+G SL +   TKEV+P  
Sbjct: 823  QFAV-QDGVVFVLEVNPRASRTVPFVSKATSVPLAKIGARAMAGISLKEQQVTKEVVPDF 881

Query: 987  VSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVFL 1046
             +VKEAV PF KF G D +LGPEMRSTGEVMG+  +F  A+ KAQ+ AG+++P +G VF+
Sbjct: 882  YAVKEAVFPFIKFPGVDTILGPEMRSTGEVMGVAETFGEAYLKAQLGAGERMPTTGKVFV 941

Query: 1047 SLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVAN 1106
            ++ D  KP +    K FL +G+ + +T GTA +L   GI V+ V K+ EGRPH  D + N
Sbjct: 942  AVKDADKPLILNTVKNFLSLGYGVCATRGTAAYLAEHGITVQIVNKVLEGRPHIVDSIKN 1001

Query: 1107 GQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTVTMTA 1166
            G+I +++ T+S D+    D   +RR  L  +VP  TT++G  A +E ++SL  N +T+ +
Sbjct: 1002 GEIALVINTTSSDTQSISDSHSIRRSALMARVPQYTTIAGGEAMSEGVKSL--NQLTVLS 1059

Query: 1167 LQDF 1170
            +Q++
Sbjct: 1060 VQEW 1063


>gi|289668839|ref|ZP_06489914.1| carbamoyl phosphate synthase large subunit [Xanthomonas campestris
            pv. musacearum NCPPB 4381]
          Length = 1080

 Score = 1265 bits (3274), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 631/1068 (59%), Positives = 800/1068 (74%), Gaps = 21/1068 (1%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTDL+ ILI+GAGPIVIGQACEFDYSG QACKAL++EGY V+L+NSNPATIMTDP +AD
Sbjct: 3    KRTDLKTILIIGAGPIVIGQACEFDYSGAQACKALRDEGYRVVLVNSNPATIMTDPNMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
              YI P+  + VE+++ KERPDALLPTMGGQTALN A+ LA+ G LEKY VELIGAK +A
Sbjct: 63   AVYIEPINWQTVEKIIAKERPDALLPTMGGQTALNCALDLADHGVLEKYNVELIGAKREA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I+ AEDR+LF+ AM  IG+  P + + +TL+E + I   +G +P IIRP+FTLGG+GGGI
Sbjct: 123  IRMAEDRELFRVAMGEIGLDCPKAAVAHTLEEALEIQTRVG-YPTIIRPSFTLGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EE   I   GL  S T++VLVE+S+LGWKE+E+EV+RD ADN +I+C+IEN+DPMG
Sbjct: 182  AYNREELIDIVGRGLELSPTTEVLVEESVLGWKEFEMEVVRDTADNCIIVCAIENLDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQRLRD SIA++R+IGV+ GGSNVQF ++P  G V+VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQRLRDASIAVLRKIGVDTGGSNVQFGISPTTGRVVVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKK-TPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ N+IT   TPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGYTLDELKNEITGGLTPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVK-ELDWD 505
            FAFEKFP ++  LTTQMKSVGE MA+GRTFQES QKALR LE G  G   S +    + D
Sbjct: 362  FAFEKFPQADARLTTQMKSVGEVMAMGRTFQESLQKALRGLETGKIGLDPSGLDLSSEDD 421

Query: 506  WEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQS 565
               LK  L+ P P+R+  +  A + GM V +++ LSFID WFL Q +E+I  EQ L    
Sbjct: 422  IATLKRELKAPGPERLFYVADAFRAGMTVADVYALSFIDPWFLDQIEEIISHEQQLADDG 481

Query: 566  VSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANT 625
            ++ +       +KR GFSD ++A    S E+ VR  R +L V P YKRVD+CAAEF  +T
Sbjct: 482  MAALDAPRLRMLKRAGFSDARLAELIGSNEESVRTLRRALKVRPVYKRVDSCAAEFATST 541

Query: 626  PYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNS 685
             YMYS+Y+ ECE+ PT + K++ILGGGPNRIGQGIEFDYCC H + +L+  G+ETIM+N 
Sbjct: 542  AYMYSTYEDECEALPTDRDKIMILGGGPNRIGQGIEFDYCCVHAALALRDDGFETIMVNC 601

Query: 686  NPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEH 745
            NPETVSTDYDTSDRLYFEPLT+EDVL +++LE+P+G+IVQ+GGQTPLKL+          
Sbjct: 602  NPETVSTDYDTSDRLYFEPLTLEDVLEIVELEKPKGVIVQYGGQTPLKLA---------- 651

Query: 746  RLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEI 805
            R   A+G   V + GTSPDSID AEDRERF  ++ +L ++QP   IA++  +AL +A+EI
Sbjct: 652  RALEANG---VPVIGTSPDSIDLAEDRERFQQLVDKLGLKQPPNRIARNSEEALVLAREI 708

Query: 806  GYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALA 865
            GYP+VVRPSYVLGGRAMEIVY +  L  Y+ +AV+V  + PVL+D++L +A+E+DVD +A
Sbjct: 709  GYPLVVRPSYVLGGRAMEIVYGESDLARYVRDAVKVSNDSPVLLDRFLDNAVEVDVDIIA 768

Query: 866  DSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMN 925
            D  GNV+IGG+MEHIE+AGVHSGDS+C +P  ++S      +    + LA+ LNV GLMN
Sbjct: 769  DKDGNVLIGGVMEHIEEAGVHSGDSSCSLPPYSLSPETQAELRRQVVMLAEGLNVVGLMN 828

Query: 926  CQYAITT--SGD--VYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKE 981
             Q+A+    +GD  VYLLE NPRASRTVPFVSKAIG PLAK AA  M+GK+L + G T E
Sbjct: 829  TQFAVQVNEAGDDIVYLLEVNPRASRTVPFVSKAIGIPLAKIAARCMAGKTLAEQGATTE 888

Query: 982  VIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLS 1041
            ++P + SVKEA+ PF KFQG D +LGPEMRSTGEVMG+  SF  AFA+AQ A G K P  
Sbjct: 889  IVPDYYSVKEAIFPFAKFQGVDPILGPEMRSTGEVMGVGRSFSAAFARAQEAGGIKAPPL 948

Query: 1042 GTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAG 1101
            G  F+S+ D  K  +  +A+A ++ GF +V+T GT  +L+  G++ E V K+ EGRPH  
Sbjct: 949  GKAFVSVRDPDKQRVLPVAQALVERGFTLVATRGTGAWLQQNGLSCEIVNKVAEGRPHIV 1008

Query: 1102 DMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALA 1149
            D + NG+I  +V T+ G +    D   +RR  L ++V   TTV+GA A
Sbjct: 1009 DSIKNGEIVYIVNTTEGRAAIS-DSFSIRREALQHRVTYSTTVAGAKA 1055


>gi|390950109|ref|YP_006413868.1| carbamoyl-phosphate synthase large subunit [Thiocystis violascens DSM
            198]
 gi|390426678|gb|AFL73743.1| carbamoyl-phosphate synthase, large subunit [Thiocystis violascens
            DSM 198]
          Length = 1069

 Score = 1265 bits (3274), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 636/1088 (58%), Positives = 805/1088 (73%), Gaps = 25/1088 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD+  ILI+G+GPIVIGQACEFDYSG QACKAL+EEGY V+L+NSNPATIMTDP +AD
Sbjct: 3    KRTDIHSILIIGSGPIVIGQACEFDYSGAQACKALREEGYRVVLVNSNPATIMTDPEMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+T   V  ++EKERP+ALLPTMGGQTALN A+ L   G LE++GVELIGA  +A
Sbjct: 63   ATYIEPVTWRAVAAIIEKERPEALLPTMGGQTALNCALDLVREGVLERFGVELIGASREA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDRDLF+QAM+ IG+  P S I ++L+E + +   IG FP IIRP+FT+GG+GGGI
Sbjct: 123  IDKAEDRDLFRQAMRRIGLDMPRSAIAHSLEEALQVQASIG-FPTIIRPSFTMGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEFE IC+ GL  S T ++L+E+S LGWKEYE+EV+RD ADN +IICSIEN DPMG
Sbjct: 182  AYNQEEFEEICRRGLDLSPTKELLIEESALGWKEYEMEVVRDRADNCIIICSIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTD+EYQ +R+ +IA++REIGV+ GGSNVQFA+NP DG +++IEMN
Sbjct: 242  VHTGDSITVAPAQTLTDREYQIMRNAAIAVLREIGVDTGGSNVQFAINPADGRMIIIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ N+IT   TPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGYTLDELRNEITGGTTPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKEL-DWD 505
            FAFEKFP ++  LTTQMKSVGE MA+GRTFQES QKA+R LE     +G   + +L D D
Sbjct: 362  FAFEKFPLADARLTTQMKSVGEVMAIGRTFQESLQKAIRGLE--IDRYGLDEIVDLADPD 419

Query: 506  -WEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQ 564
              + ++  +R    +R+  +  A + G+ ++EIHELS+ID WFL Q ++L+  E  L   
Sbjct: 420  AIDTIRLEVRQTGAERIFYVADAFRVGISLEEIHELSWIDPWFLAQIEDLVRAEGELCLA 479

Query: 565  SVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEAN 624
              + +T +    +KR+GFSD++IA      E E+R  R   G+ P +KRVDTCAAEF ++
Sbjct: 480  GRAGLTPERLRALKRQGFSDRRIAHLVGGKEGEIRALRHEQGLRPVFKRVDTCAAEFASS 539

Query: 625  TPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMN 684
            T Y+YS+Y+ ECE+ P+ ++K+++LGGGPNRIGQGIEFDYCC H +F+++  GYETIM+N
Sbjct: 540  TAYLYSTYEEECEADPSDRQKIMVLGGGPNRIGQGIEFDYCCVHAAFAMREDGYETIMVN 599

Query: 685  SNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDE 744
             NPETVSTDYDTSDRLYFEPLT+EDVL ++D ERP G+IVQ+GGQTPLKL+         
Sbjct: 600  CNPETVSTDYDTSDRLYFEPLTLEDVLEIVDKERPLGVIVQYGGQTPLKLA--------- 650

Query: 745  HRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKE 804
             R   A+G   V I GTSPD ID AEDRERF  +I++L + QP    A+SEA+A+A A +
Sbjct: 651  -RDLEAAG---VPIIGTSPDCIDLAEDRERFQQLIQQLGLRQPPNATARSEAEAVAKAAD 706

Query: 805  IGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDAL 864
            IGYP+VVRPSYVLGGRAMEIV+ +  L  Y+  AV V  E PVL+D++L DAIE+DVDA+
Sbjct: 707  IGYPLVVRPSYVLGGRAMEIVFDESELNRYMREAVRVSNESPVLLDRFLDDAIEVDVDAI 766

Query: 865  ADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLM 924
             D   +V+IGGIMEHIEQAGVHSGDSAC +P  T+S+S  D +     ++A+ LNV GLM
Sbjct: 767  CDGT-DVLIGGIMEHIEQAGVHSGDSACSLPPYTLSASIQDHMREQMARMARALNVVGLM 825

Query: 925  NCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIP 984
            N Q+AI    D+Y+LE NPRASRTVPFVSKAIG  LAK AA  M G++L + G  +E+ P
Sbjct: 826  NAQFAI-KGDDIYILEVNPRASRTVPFVSKAIGLALAKVAARCMVGRTLAEQGLRRELKP 884

Query: 985  KHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLP-LSGT 1043
            KH  VKEAV PF KF G D LLGPEM+STGEVMG+  SF  A+AKAQ  AG  LP   G 
Sbjct: 885  KHYFVKEAVFPFVKFPGVDTLLGPEMKSTGEVMGVGESFGEAYAKAQEGAGSLLPRRGGK 944

Query: 1044 VFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDM 1103
              LS+ ++ K  L R+A+  LD GF +  T GTA  +   G+    V K+ EGRPH  DM
Sbjct: 945  AMLSVREVDKTRLIRVARDLLDFGFTLYGTHGTAAAIREAGLDCVGVNKVAEGRPHIVDM 1004

Query: 1104 VANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTVT 1163
            + N +I  +V T+ G +    D   +RR  L +KVP  TT++GA A   A++ L  + V+
Sbjct: 1005 IKNNEIGFIVNTTEG-AKAIADSAAIRRAALQHKVPYTTTIAGAEATCLALKQL--DIVS 1061

Query: 1164 MTALQDFF 1171
            +  LQD +
Sbjct: 1062 VNRLQDLY 1069


>gi|184159250|ref|YP_001847589.1| carbamoylphosphate synthase large subunit [Acinetobacter baumannii
            ACICU]
 gi|183210844|gb|ACC58242.1| Carbamoylphosphate synthase large subunit (split gene in MJ)
            [Acinetobacter baumannii ACICU]
          Length = 1076

 Score = 1265 bits (3273), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 627/1080 (58%), Positives = 799/1080 (73%), Gaps = 36/1080 (3%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILI+GAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIKSILIIGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPSMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+T + V Q++EKERPDA+LPTMGGQTALN A+AL E+G LEKYGVELIGA  +A
Sbjct: 63   ATYIEPITWQTVAQIIEKERPDAVLPTMGGQTALNCALALDENGVLEKYGVELIGATKEA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I+KAEDR LF +AM+ IG++ P + I  T++E + I +  G FP+IIRP+FT+GG+GGGI
Sbjct: 123  IEKAEDRKLFDEAMRKIGLECPKAAIAETMEEALEIQSRFG-FPVIIRPSFTMGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEF  IC+ G   S T Q+L+++SL+GWKEYE+EV+RD  DN +I+C+IEN DPMG
Sbjct: 182  AYNREEFLEICERGFDLSPTHQLLIDESLIGWKEYEMEVVRDKNDNCIIVCAIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGVE GGSNVQF +NP DG ++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQLMRNASVAVLREIGVETGGSNVQFGINPKDGRMVVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKK-TPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT   TPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKIAAKLAVGYTLDELKNDITGGVTPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGW------GCSNVK 500
            F FEKFP +EP+LTTQMKSVGE  A+GR FQES QKALR LE G SG+      G +NVK
Sbjct: 362  FNFEKFPQAEPVLTTQMKSVGEVTAIGRNFQESVQKALRGLEVGVSGFDEKVEAGATNVK 421

Query: 501  ELDWDWEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQF 560
                  E +   L+VP P+R+  +  A + G  +D++ E + ID+WFL Q +++++ E  
Sbjct: 422  ------ETILKELKVPGPERIWYVADAFRHGFSLDDVFEATKIDRWFLIQIQDIVNTEAQ 475

Query: 561  LLTQSVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAE 620
            + T    ++T ++    KR+G SD +IA     ++K+ R++R +LGV P YKRVDTCAAE
Sbjct: 476  VKTLGFGDLTAENIRSFKRKGLSDLRIANLMGISQKQFRKQRWNLGVYPVYKRVDTCAAE 535

Query: 621  FEANTPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYET 680
            FE+ T YMYS+YD ECE+ P+ + K++++GGGPNRIGQGIEFDYCC H + +++  GYET
Sbjct: 536  FESGTAYMYSTYDEECEANPSNRDKIMVIGGGPNRIGQGIEFDYCCVHAALAMREDGYET 595

Query: 681  IMMNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQ 740
            IM+N NPETVSTDYDTSDRLYFEP+T+EDVL ++  E+P+G+IVQ+GGQTPLKL+    +
Sbjct: 596  IMVNCNPETVSTDYDTSDRLYFEPVTLEDVLEIVRTEKPKGVIVQYGGQTPLKLA----R 651

Query: 741  YLDEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALA 800
             L+E   P         I GTSPD+ID AEDRERF  +I+ L + QP   I KS  + ++
Sbjct: 652  ALEEAGTP---------IIGTSPDAIDRAEDRERFQQMIQRLQLRQPNNSIVKSAEEGIS 702

Query: 801  IAKEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEID 860
             A ++GYP+VVRPSYVLGGRAMEIVY ++ L  YL  AV+   E PVL+D +L DA E+D
Sbjct: 703  EAAKVGYPLVVRPSYVLGGRAMEIVYNEDELKRYLREAVQASNEAPVLLDHFLDDATEVD 762

Query: 861  VDALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNV 920
            VD ++D   +VVIGGIM+HIEQAG+HSGDSAC IP  ++S    D +   TI +AK L V
Sbjct: 763  VDCVSDG-KDVVIGGIMQHIEQAGIHSGDSACSIPPYSLSKEIQDEMRRQTIAMAKELGV 821

Query: 921  CGLMNCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTK 980
             GLMN Q+A+    D+Y+LE NPRASRTVPFVSK IG  LAK AA  M+G+SL   GFTK
Sbjct: 822  VGLMNVQFAV-KGNDIYVLEVNPRASRTVPFVSKCIGESLAKVAARCMAGQSLESQGFTK 880

Query: 981  EVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQK--- 1037
            E+IP   +VKEAV PF KF G D +LGPEM+STGEVMG+  +F  AF KA + +  +   
Sbjct: 881  EIIPNRFAVKEAVFPFAKFPGVDPMLGPEMKSTGEVMGVGQTFGEAFYKAVLGSNDRLPG 940

Query: 1038 LPLSGTV---FLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMH 1094
            LP  G V   FLS+ +  K ++  IAK  ++ GFK+V+T GT   L+  G+  E V K+ 
Sbjct: 941  LPTEGEVKHAFLSVRESDKKYIADIAKKLVEYGFKLVATGGTYQVLKEAGLECESVNKVT 1000

Query: 1095 EGRPHAGDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAI 1154
            EGRPH  D + NG+I ++V T+ G    Q D   +RR  L  KV   TT++GA A  +A 
Sbjct: 1001 EGRPHIVDRLKNGEIHLIVNTTEGKQA-QYDSAMIRRAALQGKVYYTTTINGAEAVCQAF 1059


>gi|424744770|ref|ZP_18173054.1| carbamoyl-phosphate synthase, large subunit [Acinetobacter baumannii
            WC-141]
 gi|422942670|gb|EKU37716.1| carbamoyl-phosphate synthase, large subunit [Acinetobacter baumannii
            WC-141]
          Length = 1076

 Score = 1265 bits (3273), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 627/1080 (58%), Positives = 796/1080 (73%), Gaps = 36/1080 (3%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILI+GAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIKSILIIGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPSMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+T + V Q++EKERPDA+LPTMGGQTALN A+AL E G L KY VELIGA  +A
Sbjct: 63   ATYIEPITWQTVAQIIEKERPDAVLPTMGGQTALNCALALDEHGVLAKYNVELIGASKEA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I+KAEDR LF  AM+ IG++ P + I  T++E ++I +  G FP+IIRP+FT+GG+GGGI
Sbjct: 123  IEKAEDRKLFDIAMRKIGLECPKAAIAETMEEALAIQSRFG-FPVIIRPSFTMGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEF  IC+ G   S T Q+L+++SL+GWKEYE+EV+RD  DN +I+C+IEN DPMG
Sbjct: 182  AYNREEFLEICERGFDLSPTHQLLIDESLIGWKEYEMEVVRDKNDNCIIVCAIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGVE GGSNVQF +NP DG ++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQLMRNASVAVLREIGVETGGSNVQFGINPKDGRMVVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKK-TPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT   TPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKIAAKLAVGYTLDELKNDITGGVTPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGW------GCSNVK 500
            F FEKFP +EP+LTTQMKSVGE MA+GR FQES QKALR LE G SG+      G +N K
Sbjct: 362  FNFEKFPQAEPVLTTQMKSVGEVMAIGRNFQESVQKALRGLEVGVSGFDEKIEAGATNAK 421

Query: 501  ELDWDWEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQF 560
                  E +   L+VP P+R+  +  A + G  +DE+ E + ID+WFL Q ++++  E  
Sbjct: 422  ------ETILKELKVPGPERIWYVADAFRHGFSLDEVFEATKIDRWFLIQIQDIVKTEAE 475

Query: 561  LLTQSVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAE 620
            +      ++  D+    KR+G SD +IA     ++K+ R++R +LGV P YKRVDTCAAE
Sbjct: 476  VKALGFGDLNADNIRSFKRKGLSDLRIADLMGISQKQFRKQRWNLGVYPVYKRVDTCAAE 535

Query: 621  FEANTPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYET 680
            FE+ T YMYS+YD ECE+ P+ + K++++GGGPNRIGQGIEFDYCC H + +++  GYET
Sbjct: 536  FESGTAYMYSTYDEECEANPSNRDKIMVIGGGPNRIGQGIEFDYCCVHAALAMREDGYET 595

Query: 681  IMMNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQ 740
            IM+N NPETVSTDYDTSDRLYFEP+T+EDVL ++  E+P+G+IVQ+GGQTPLKL+    +
Sbjct: 596  IMVNCNPETVSTDYDTSDRLYFEPVTLEDVLEIVRTEKPKGVIVQYGGQTPLKLA----R 651

Query: 741  YLDEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALA 800
             L+E   P         I GTSPD+ID AEDRERF  +I+ L + QP   I KS  + ++
Sbjct: 652  ALEEAGTP---------IIGTSPDAIDRAEDRERFQQMIQRLQLRQPNNSIVKSAEEGIS 702

Query: 801  IAKEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEID 860
             A ++GYP+VVRPSYVLGGRAMEIVY +E L  YL  AV+   E PVL+D++L DA E+D
Sbjct: 703  EAAKVGYPLVVRPSYVLGGRAMEIVYNEEELKRYLREAVQASNEAPVLLDRFLDDATEVD 762

Query: 861  VDALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNV 920
            VD ++D   +VVIGGIM+HIEQAG+HSGDSAC IP  ++S    D +   T+ +AK L V
Sbjct: 763  VDCVSDG-KDVVIGGIMQHIEQAGIHSGDSACSIPPYSLSKEIQDEMRRQTVAMAKELGV 821

Query: 921  CGLMNCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTK 980
             GLMN Q+A+    DVY+LE NPRASRTVPFVSK IG  LAK AA  M+G+SL   GFTK
Sbjct: 822  VGLMNVQFAVKGE-DVYVLEVNPRASRTVPFVSKCIGDSLAKVAARCMAGQSLESQGFTK 880

Query: 981  EVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQK--- 1037
            E+IP H +VKEAV PF KFQG D +LGPEM+STGEVMG+  +F  AF KA + + ++   
Sbjct: 881  EIIPTHFAVKEAVFPFAKFQGVDPMLGPEMKSTGEVMGVGKTFGEAFYKAVLGSNERLPG 940

Query: 1038 LPLSGTV---FLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMH 1094
            LP  G V   FLS+ +  K ++  IAK  +  GFK+++T GT   L+  G+  E V K+ 
Sbjct: 941  LPTEGEVKHAFLSVRESDKKYIADIAKKLVAYGFKLIATGGTYQVLKEAGLECESVNKVT 1000

Query: 1095 EGRPHAGDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAI 1154
            EGRPH  D + NG+I ++V T+ G    Q D   +RR  L  KV   TT++GA A  +A 
Sbjct: 1001 EGRPHIVDRLKNGEIHLIVNTTEGKQA-QYDSAMIRRAALQGKVYYTTTINGAEAVCQAF 1059


>gi|325922458|ref|ZP_08184225.1| carbamoyl-phosphate synthase large subunit [Xanthomonas gardneri ATCC
            19865]
 gi|325547078|gb|EGD18165.1| carbamoyl-phosphate synthase large subunit [Xanthomonas gardneri ATCC
            19865]
          Length = 1080

 Score = 1265 bits (3273), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 629/1068 (58%), Positives = 803/1068 (75%), Gaps = 21/1068 (1%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTDL+ ILI+GAGPIVIGQACEFDYSG QACKAL++EGY V+L+NSNPATIMTDP +AD
Sbjct: 3    KRTDLKTILIIGAGPIVIGQACEFDYSGAQACKALRDEGYRVVLVNSNPATIMTDPDMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
              YI P+  + VE+++ KE+PDALLPTMGGQTALN A+ LA+ G LEKY VELIGAK +A
Sbjct: 63   AVYIEPINWQTVEKIIAKEKPDALLPTMGGQTALNCALDLADHGVLEKYNVELIGAKREA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I+ AEDR+LF+ AM  IG+  P + + +TL+E + I   +G +P IIRP+FTLGG+GGGI
Sbjct: 123  IRMAEDRELFRVAMGEIGLDCPRAEVAHTLEEALDIQTRVG-YPTIIRPSFTLGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EE   I   GL  S T++VLVE+S+LGWKE+E+EV+RD ADN +I+C+IEN+DPMG
Sbjct: 182  AYNREELIDIVGRGLELSPTTEVLVEESVLGWKEFEMEVVRDTADNCIIVCAIENLDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQRLRD SIA++R+IGV+ GGSNVQF ++P +G V+VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQRLRDASIAVLRKIGVDTGGSNVQFGISPTNGRVVVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKK-TPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ N+IT   TPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGYTLDELKNEITGGLTPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVK-ELDWD 505
            FAFEKFP ++  LTTQMKSVGE MA+GRTFQES QKALR LE G  G   + +    + D
Sbjct: 362  FAFEKFPQADARLTTQMKSVGEVMAMGRTFQESLQKALRGLETGKIGLDPTGLDLSSEDD 421

Query: 506  WEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQS 565
               LK  L+ P P+R+  +  A + GM V +I+ LSFID WFL Q +ELI  EQ L    
Sbjct: 422  IAALKRELKAPGPERLFYVADAFRAGMSVSDIYALSFIDPWFLDQIEELISHEQQLADDG 481

Query: 566  VSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANT 625
            ++++       +KR GFSD ++A  T + E+ VR  R +L V P YKRVD+CAAEF  +T
Sbjct: 482  MASLDAARLRTLKRAGFSDARLAELTGTNEESVRTLRRALKVRPVYKRVDSCAAEFATST 541

Query: 626  PYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNS 685
             Y+YS+Y+ ECE+ PT + K++ILGGGPNRIGQGIEFDYCC H + +L+  GYETIM+N 
Sbjct: 542  AYLYSTYEDECEALPTDRDKIMILGGGPNRIGQGIEFDYCCVHAALALRDDGYETIMVNC 601

Query: 686  NPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEH 745
            NPETVSTDYDTSDRLYFEPLT+EDVL +++LE+P+G+IVQ+GGQTPLKL+          
Sbjct: 602  NPETVSTDYDTSDRLYFEPLTLEDVLEIVELEKPKGVIVQYGGQTPLKLA---------- 651

Query: 746  RLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEI 805
            R   A+G   V + GTSPDSID AEDRERF  ++ +L ++QP   IA++  +AL +A+EI
Sbjct: 652  RALEANG---VPVIGTSPDSIDLAEDRERFQQLVDKLGLKQPPNRIARNSEEALVLAREI 708

Query: 806  GYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALA 865
            GYP+VVRPSYVLGGRAMEIVY +  L  Y+ +AV+V  + PVL+D++L +A+E+DVD +A
Sbjct: 709  GYPLVVRPSYVLGGRAMEIVYGESDLARYVRDAVKVSNDSPVLLDRFLDNAVEVDVDIIA 768

Query: 866  DSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMN 925
            D  GNV+IGG+MEHIE+AGVHSGDS+C +P  ++S      +    + LA+ LNV GLMN
Sbjct: 769  DKDGNVLIGGLMEHIEEAGVHSGDSSCSLPPYSLSPKTQAELRRQVVMLAEGLNVVGLMN 828

Query: 926  CQYAITT--SGD--VYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKE 981
             Q+A+    +GD  V+LLE NPRASRTVPFVSKA G PLAK AA  M+GK+L + G TKE
Sbjct: 829  TQFAVQVDEAGDDVVFLLEVNPRASRTVPFVSKATGMPLAKIAARCMAGKTLAEQGATKE 888

Query: 982  VIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLS 1041
            ++P + SVKEA+ PF KFQG D +LGPEMRSTGEVMG+  SF  AFA+AQ A G K P  
Sbjct: 889  IVPDYYSVKEAIFPFAKFQGVDPILGPEMRSTGEVMGVGRSFSAAFARAQEAGGIKAPPV 948

Query: 1042 GTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAG 1101
            G  F+S+ D  K  +  +A+A ++ G+ +V+T GT  +L+  G++ E V K+ EGRPH  
Sbjct: 949  GKAFVSVRDPDKKRVLPVAQALVERGYTLVATRGTGAWLQENGLSCEIVNKVAEGRPHIV 1008

Query: 1102 DMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALA 1149
            D + NG+I  +V T+ G +    D   +RR  L ++V   TTV+GA A
Sbjct: 1009 DSIKNGEIVYIVNTTEGRAAIS-DSFSIRREALQHRVTYSTTVAGAKA 1055


>gi|445428609|ref|ZP_21438129.1| carbamoyl-phosphate synthase, large subunit [Acinetobacter baumannii
            OIFC021]
 gi|444761850|gb|ELW86228.1| carbamoyl-phosphate synthase, large subunit [Acinetobacter baumannii
            OIFC021]
          Length = 1076

 Score = 1265 bits (3273), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 626/1080 (57%), Positives = 797/1080 (73%), Gaps = 36/1080 (3%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILI+GAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIKSILIIGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPSMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+T + V Q++EKERPDA+LPTMGGQTALN A+AL E+G L KY VELIGA  +A
Sbjct: 63   ATYIEPITWQTVAQIIEKERPDAVLPTMGGQTALNCALALDENGVLAKYNVELIGATKEA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I+KAEDR LF  AM+ IG++ P + I  T++E + I +  G FP+IIRP+FT+GG+GGGI
Sbjct: 123  IEKAEDRKLFDIAMRKIGLECPKAAIAETMEEALEIQSRFG-FPVIIRPSFTMGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEF  IC+ G   S T Q+L+++SL+GWKEYE+EV+RD  DN +I+C+IEN DPMG
Sbjct: 182  AYNREEFLEICERGFDLSPTHQLLIDESLIGWKEYEMEVVRDKNDNCIIVCAIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGVE GGSNVQF +NP DG ++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQLMRNASVAVLREIGVETGGSNVQFGINPKDGRMVVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKK-TPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT   TPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKIAAKLAVGYTLDELKNDITGGVTPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGW------GCSNVK 500
            F FEKFP +EP+LTTQMKSVGE MA+GR FQES QKALR LE G SG+      G +NVK
Sbjct: 362  FNFEKFPQAEPVLTTQMKSVGEVMAIGRNFQESVQKALRGLEVGVSGFDEKIEAGATNVK 421

Query: 501  ELDWDWEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQF 560
                  E +   L+VP P+R+  +  A + G  +D++ E + ID+WFL Q ++++  E  
Sbjct: 422  ------ETILKELKVPGPERIWYVADAFRHGFSLDDVFEATKIDRWFLIQIQDIVKTEAQ 475

Query: 561  LLTQSVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAE 620
            + T    ++T ++    KR+G SD +IA     ++K+ R++R +LGV P YKRVDTCAAE
Sbjct: 476  VKTLGFGDLTAENIRSFKRKGLSDLRIANLMGISQKQFRKQRWNLGVYPVYKRVDTCAAE 535

Query: 621  FEANTPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYET 680
            FE+ T YMYS+YD ECE+ P+ + K++++GGGPNRIGQGIEFDYCC H + +++  GYET
Sbjct: 536  FESGTAYMYSTYDEECEANPSNRDKIMVIGGGPNRIGQGIEFDYCCVHAALAMREDGYET 595

Query: 681  IMMNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQ 740
            IM+N NPETVSTDYDTSDRLYFEP+T+EDVL ++  E+P+G+IVQ+GGQTPLKL+    +
Sbjct: 596  IMVNCNPETVSTDYDTSDRLYFEPVTLEDVLEIVRTEKPKGVIVQYGGQTPLKLA----R 651

Query: 741  YLDEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALA 800
             L+E   P         I GTSPD+ID AEDRERF  +I+ L + QP   I KS  + ++
Sbjct: 652  ALEEAGTP---------IIGTSPDAIDRAEDRERFQQMIQRLQLRQPNNSIVKSAEEGIS 702

Query: 801  IAKEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEID 860
             A ++GYP+VVRPSYVLGGRAMEIVY ++ L  YL  AV+   E PVL+D +L DA E+D
Sbjct: 703  EAAKVGYPLVVRPSYVLGGRAMEIVYNEDELKRYLREAVQASNEAPVLLDHFLDDATEVD 762

Query: 861  VDALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNV 920
            VD ++D   +VVIGGIM+HIEQAG+HSGDSAC IP  ++S    D +   T+ +AK L V
Sbjct: 763  VDCVSDG-KDVVIGGIMQHIEQAGIHSGDSACSIPPYSLSKEVQDEMRRQTVAMAKELGV 821

Query: 921  CGLMNCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTK 980
             GLMN Q+A+    D+Y+LE NPRASRTVPFVSK IG  LAK AA  M+G+SL   GFT+
Sbjct: 822  VGLMNVQFAV-KGDDIYVLEVNPRASRTVPFVSKCIGESLAKVAARCMAGQSLESQGFTE 880

Query: 981  EVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPL 1040
            E+IP H +VKEAV PF KFQG D +LGPEM+STGEVMG+  +F  AF KA + +  +LP 
Sbjct: 881  EIIPTHFAVKEAVFPFAKFQGVDPMLGPEMKSTGEVMGVGKTFGEAFYKAVLGSNDRLPG 940

Query: 1041 SGT------VFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMH 1094
              T       FLS+ +  K ++  IAK F+  GFK+V+T GT   L+  G+  E V K+ 
Sbjct: 941  LPTEGEEKIAFLSVRESDKKYIADIAKKFVAYGFKLVATGGTYKVLKEAGLECESVNKVT 1000

Query: 1095 EGRPHAGDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAI 1154
            EGRPH  D + NG+I ++V T+ G    Q D   +RR  L  KV   TT++GA A  +A 
Sbjct: 1001 EGRPHIVDRLKNGEIHLIVNTTEGKQA-QYDSAMIRRAALQGKVYYTTTINGAEAVCQAF 1059


>gi|451822857|ref|YP_007459131.1| carbamoyl-phosphate synthase large subunit [Candidatus
            Kinetoplastibacterium desouzaii TCC079E]
 gi|451775657|gb|AGF46698.1| carbamoyl-phosphate synthase large subunit [Candidatus
            Kinetoplastibacterium desouzaii TCC079E]
          Length = 1080

 Score = 1265 bits (3273), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 633/1079 (58%), Positives = 800/1079 (74%), Gaps = 28/1079 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTDL+ ILI+GAGPIVIGQACEFDYSG QACKALK EG+  IL+NSNPATIMTDP  AD
Sbjct: 3    KRTDLKSILIIGAGPIVIGQACEFDYSGAQACKALKSEGFRTILVNSNPATIMTDPETAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  + VE+++EKERPDALLPTMGGQTALN A+ L+  G L+KY VELIGA   A
Sbjct: 63   VTYIEPINWQAVEKIIEKERPDALLPTMGGQTALNCALDLSSHGVLDKYNVELIGANAKA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDEC------ISIANEIGEFPLIIRPAFTLG 261
            I+KAEDR+ FK+AM  IG+++  SG+ +++ E       I+  +E+  FP++IRP+FT+G
Sbjct: 123  IEKAEDRNKFKKAMTDIGLESAKSGLAHSMKEAWEVQQSIAANSEVSGFPVVIRPSFTMG 182

Query: 262  GTGGGIAYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIE 321
            G+GGGIAYN +EFE IC  GL AS T ++L+E+SLLGWKE+E+EV+RD ADN +IICSIE
Sbjct: 183  GSGGGIAYNADEFEEICTRGLEASPTKELLIEESLLGWKEFEMEVIRDKADNCIIICSIE 242

Query: 322  NVDPMGVHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEV 381
            N+DPMGVHTGDSITVAPAQTLTD+EYQ +R  SIA++REIGV+ GGSNVQFAVNP  G +
Sbjct: 243  NLDPMGVHTGDSITVAPAQTLTDREYQIMRSASIAVLREIGVDTGGSNVQFAVNPDTGRM 302

Query: 382  MVIEMNPRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKK-TPASFEPSIDYV 440
            +VIEMNPRVSRSSALASKATGFPIAK+AA L+VG++LD++ NDIT   TPASFEPSIDYV
Sbjct: 303  VVIEMNPRVSRSSALASKATGFPIAKVAALLAVGFTLDELKNDITGGLTPASFEPSIDYV 362

Query: 441  VTKIPRFAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVK 500
            VTK+PRFAFEKFP ++  LTTQMKSVGE MA+GRTFQESFQKALR LE G  G     V 
Sbjct: 363  VTKVPRFAFEKFPTADSRLTTQMKSVGEVMAIGRTFQESFQKALRGLEVGVDGLNQKTV- 421

Query: 501  ELDWDWEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQF 560
                D E L+  L  P P+R+  +  A  +G  V+E+H ++ ID WFL Q K ++D+E  
Sbjct: 422  ----DRETLQVELGEPGPERIWYVADAFAQGWSVEEVHSITKIDSWFLDQIKNIVDIELS 477

Query: 561  LLTQSVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAE 620
            L T ++SN+      E+KRRGFSD +I F   ++E E+R+ R   G+ P YKRVDTCAAE
Sbjct: 478  LETYNLSNLDHSTLLELKRRGFSDTRIGFLLDASESEIRKLRHQFGIRPVYKRVDTCAAE 537

Query: 621  FEANTPYMYSSYDFECESAPT-QKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYE 679
            F   T YMYS+Y+ ECES P+  KKKV+ILGGGPNRIGQGIEFDYCC H S +L+  GYE
Sbjct: 538  FSTRTAYMYSTYEDECESHPSDDKKKVVILGGGPNRIGQGIEFDYCCVHASLALKEDGYE 597

Query: 680  TIMMNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIH 739
            TIM+N NPETVSTDYDTSDRLYFEPLT+E+VL ++  E P G+IV +GGQTPLKL+    
Sbjct: 598  TIMINCNPETVSTDYDTSDRLYFEPLTLENVLEIVYKENPIGVIVHYGGQTPLKLA---- 653

Query: 740  QYLDEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADAL 799
            + L+ + +P         I GTSP+SID AEDRERF  ++ ++++ QP    A++E++AL
Sbjct: 654  KSLEANGVP---------IIGTSPESIDIAEDRERFQKLLNKINLRQPPNRTARTESEAL 704

Query: 800  AIAKEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEI 859
            A+A EIGYP+VVRPSYVLGGRAMEIV+    L  Y+  AV+V  + PVL+D++L++A E+
Sbjct: 705  ALAIEIGYPLVVRPSYVLGGRAMEIVHEQNDLERYMREAVKVSNDSPVLLDRFLNNATEV 764

Query: 860  DVDALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLN 919
            DVD ++D   +  IGG+MEHIEQAGVHSGDSAC +P  ++S   +  I + T  +AK LN
Sbjct: 765  DVDCISDGI-DSFIGGVMEHIEQAGVHSGDSACSLPHYSLSDEIVSDIKNQTNLIAKSLN 823

Query: 920  VCGLMNCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFT 979
            V GLMN Q+A+   GDVY+LE NPRASRTVP+VSK+ G  LAK AA VM G+SL+  G  
Sbjct: 824  VKGLMNIQFAV-QDGDVYVLEVNPRASRTVPYVSKSTGLQLAKIAARVMVGQSLSSQGIK 882

Query: 980  KEVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLP 1039
            KE+IP + SVKE+V PF KF G D +LGPEM+STGEVMG+  SF  AF KAQ+ AG KLP
Sbjct: 883  KEIIPSYFSVKESVFPFVKFPGVDTILGPEMKSTGEVMGVGRSFGEAFVKAQMGAGVKLP 942

Query: 1040 LSGTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPH 1099
             SG VF+S+ +  K     IAK   D+GFKI++T GTA  +   G+ V+ V K++EGRPH
Sbjct: 943  ESGLVFISVKEQDKNLAVEIAKGLHDLGFKIIATRGTAKKISEVGLPVQIVNKVNEGRPH 1002

Query: 1100 AGDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLK 1158
              DM+ NG I +++ T        ID   +R + LA +V   TT++GA A  E ++ L+
Sbjct: 1003 IVDMIKNGDISLVINTVEERRNAIIDSRTIRVQSLANRVTCFTTIAGARAAVEGMQYLR 1061


>gi|294651181|ref|ZP_06728513.1| carbamoyl-phosphate synthase large subunit [Acinetobacter
            haemolyticus ATCC 19194]
 gi|292822934|gb|EFF81805.1| carbamoyl-phosphate synthase large subunit [Acinetobacter
            haemolyticus ATCC 19194]
          Length = 1077

 Score = 1265 bits (3273), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 625/1080 (57%), Positives = 798/1080 (73%), Gaps = 36/1080 (3%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILI+GAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIKSILIIGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPSMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+T + V Q++EKERPDA+LPTMGGQTALN A+AL E G LEKY VELIGA  +A
Sbjct: 63   ATYIEPITWQTVAQIIEKERPDAVLPTMGGQTALNCALALDEHGVLEKYNVELIGASKEA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I+KAEDR LF  AM+ IG++ P + +  +++  + I +  G FP+IIRP+FT+GG+GGGI
Sbjct: 123  IEKAEDRKLFDIAMRKIGLECPRADVAESMEHALEIQSRFG-FPVIIRPSFTMGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYNKEEF  IC+ G   S T Q+L+++SL+GWKEYE+EV+RD  DN +I+C+IEN DPMG
Sbjct: 182  AYNKEEFIEICERGFDLSPTKQLLIDESLIGWKEYEMEVVRDKNDNCIIVCAIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGVE GGSNVQF +NP DG ++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQIMRNASVAVLREIGVETGGSNVQFGINPKDGRMVVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKK-TPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT   TPASFEP+IDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKIAAKLAVGYTLDELKNDITGGVTPASFEPAIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGW------GCSNVK 500
            F FEKFP +EP+LTTQMKSVGE MA+GR FQES QKALR LE G SG+      G +N K
Sbjct: 362  FNFEKFPQAEPVLTTQMKSVGEVMAIGRNFQESVQKALRGLEVGVSGFDEKVEAGTTNAK 421

Query: 501  ELDWDWEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQF 560
            ++      +   L+VP P+R+  +  A + G  +DE+ E + ID+WFL Q +++I  E  
Sbjct: 422  DI------ILKELKVPGPERIWYVADAFRHGFSLDEVFEATKIDRWFLIQIEDIIKTEAQ 475

Query: 561  LLTQSVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAE 620
            + T    ++  D+    KR+G SD +IA     ++K+ R++R +LGV P YKRVDTCAAE
Sbjct: 476  VKTLGFGDLNADNIRSFKRKGLSDLRIANLMGISQKQFRKQRWNLGVYPVYKRVDTCAAE 535

Query: 621  FEANTPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYET 680
            FE+ T YMYS+YD ECE+ P+ + K++++GGGPNRIGQGIEFDYCC H + +++  GYET
Sbjct: 536  FESGTAYMYSTYDEECEANPSNRDKIMVIGGGPNRIGQGIEFDYCCVHAALAMREDGYET 595

Query: 681  IMMNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQ 740
            IM+N NPETVSTDYDTSDRLYFEP+T+EDVL ++  E+P+G+IVQ+GGQTPLKL+    +
Sbjct: 596  IMVNCNPETVSTDYDTSDRLYFEPVTLEDVLEIVRTEKPKGVIVQYGGQTPLKLA----R 651

Query: 741  YLDEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALA 800
             L+E   P         I GTSPD+ID AEDRERF  +I+ L + QP   I KS  + ++
Sbjct: 652  ALEEAGTP---------IIGTSPDAIDRAEDRERFQQMIQRLQLRQPNNSIVKSAEEGIS 702

Query: 801  IAKEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEID 860
             A ++GYP+VVRPSYVLGGRAMEIVY +E L  YL  AV+   E PVL+D++L DA E+D
Sbjct: 703  EAAKVGYPLVVRPSYVLGGRAMEIVYNEEELKRYLREAVQASNEAPVLLDRFLDDATEVD 762

Query: 861  VDALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNV 920
            VD ++D   +VVIGGIM+HIEQAG+HSGDSAC IP  ++S    D +   T+ +AK L V
Sbjct: 763  VDCVSDG-KDVVIGGIMQHIEQAGIHSGDSACSIPPYSLSQEVQDEMRRQTVAMAKELGV 821

Query: 921  CGLMNCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTK 980
             GLMN Q+A+    D+Y+LE NPRASRTVPFVSK IG  LAK AA  M+G+SL   GFTK
Sbjct: 822  VGLMNVQFAV-KGNDIYVLEVNPRASRTVPFVSKCIGESLAKVAARCMAGQSLESQGFTK 880

Query: 981  EVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQK--- 1037
            E+IP H +VKEAV PF KFQG D +LGPEM+STGEVMG+  +F  AF KA + + ++   
Sbjct: 881  EIIPTHFAVKEAVFPFAKFQGVDPMLGPEMKSTGEVMGVGETFGEAFYKAVLGSNERLPG 940

Query: 1038 LPLSGTV---FLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMH 1094
            LP  G V   FLS+ +  K ++  IA+  +  GFK+V+T+GT   L+  G+  E V K+ 
Sbjct: 941  LPTEGEVKYAFLSVRESDKKYIANIAQQLIAYGFKLVATNGTYQVLQEAGLECEAVNKVT 1000

Query: 1095 EGRPHAGDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAI 1154
            EGRPH  D + NG+I ++V T+ G    Q D   +RR  L  KV   TT++GA A  +A 
Sbjct: 1001 EGRPHIVDRLKNGEIHLIVNTTEGKQA-QYDSAMIRRAALQGKVYYTTTINGAEAVCQAF 1059


>gi|226951539|ref|ZP_03822003.1| carbamoyl-phosphate synthase, large subunit [Acinetobacter sp. ATCC
            27244]
 gi|226837731|gb|EEH70114.1| carbamoyl-phosphate synthase, large subunit [Acinetobacter sp. ATCC
            27244]
          Length = 1077

 Score = 1264 bits (3272), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 624/1080 (57%), Positives = 797/1080 (73%), Gaps = 36/1080 (3%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILI+GAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIKSILIIGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPSMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+T + V Q++EKERPDA+LPTMGGQTALN A+AL E G LEKY VELIGA  +A
Sbjct: 63   ATYIEPITWQTVAQIIEKERPDAVLPTMGGQTALNCALALDEHGVLEKYNVELIGASKEA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I+KAEDR LF  AM+ IG++ P + +  +++  + I +  G FP+IIRP+FT+GG+GGGI
Sbjct: 123  IEKAEDRKLFDIAMRKIGLECPRADVAESMEHALEIQSRFG-FPVIIRPSFTMGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYNKEEF  IC+ G   S T Q+L+++SL+GWKEYE+EV+RD  DN +I+C+IEN DPMG
Sbjct: 182  AYNKEEFIEICERGFDLSPTKQLLIDESLIGWKEYEMEVVRDKNDNCIIVCAIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGVE GGSNVQF +NP DG ++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQIMRNASVAVLREIGVETGGSNVQFGINPKDGRMVVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKK-TPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT   TPASFEP+IDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKIAAKLAVGYTLDELKNDITGGVTPASFEPAIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGW------GCSNVK 500
            F FEKFP +EP+LTTQMKSVGE MA+GR FQES QKALR LE G SG+      G +N K
Sbjct: 362  FNFEKFPQAEPVLTTQMKSVGEVMAIGRNFQESVQKALRGLEVGVSGFDEKIEVGTANAK 421

Query: 501  ELDWDWEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQF 560
            ++      +   L+VP PDR+  +  A + G  +DE+ E + ID+WFL Q ++++  E  
Sbjct: 422  DI------ILKELKVPGPDRIWYVADAFRHGFSLDEVFEATKIDRWFLIQIEDIVKTEAQ 475

Query: 561  LLTQSVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAE 620
            + T    ++  D+    KR+G SD +IA     ++K+ R++R +LGV P YKRVDTCAAE
Sbjct: 476  VKTLGFGDLNADNIRSFKRKGLSDLRIANLMGISQKQFRKQRWNLGVYPVYKRVDTCAAE 535

Query: 621  FEANTPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYET 680
            FE+ T YMYS+YD ECE+ P+ + K++++GGGPNRIGQGIEFDYCC H + +++  GYET
Sbjct: 536  FESGTAYMYSTYDEECEANPSNRDKIMVIGGGPNRIGQGIEFDYCCVHAALAMREDGYET 595

Query: 681  IMMNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQ 740
            IM+N NPETVSTDYDTSDRLYFEP+T+EDVL ++  E+P+G+IVQ+GGQTPLKL+    +
Sbjct: 596  IMVNCNPETVSTDYDTSDRLYFEPVTLEDVLEIVRTEKPKGVIVQYGGQTPLKLA----R 651

Query: 741  YLDEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALA 800
             L+E   P         I GTSPD+ID AEDRERF  +I+ L + QP   I KS  + ++
Sbjct: 652  ALEEAGTP---------IIGTSPDAIDRAEDRERFQQMIQRLQLRQPNNSIVKSAEEGIS 702

Query: 801  IAKEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEID 860
             A ++GYP+VVRPSYVLGGRAMEIVY +E L  YL  AV+   E PVL+D++L DA E+D
Sbjct: 703  EAAKVGYPLVVRPSYVLGGRAMEIVYNEEELKRYLREAVQASNEAPVLLDRFLDDATEVD 762

Query: 861  VDALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNV 920
            VD ++D   +VVIGGIM+HIEQAG+HSGDSAC IP  ++S    D +   T+ +AK L V
Sbjct: 763  VDCVSDG-KDVVIGGIMQHIEQAGIHSGDSACSIPPYSLSQEVQDEMRRQTVAMAKELGV 821

Query: 921  CGLMNCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTK 980
             GLMN Q+A+    D+Y+LE NPRASRTVPFVSK IG  LAK AA  M+G+SL   GFT 
Sbjct: 822  VGLMNVQFAV-KGNDIYVLEVNPRASRTVPFVSKCIGESLAKVAARCMAGQSLESQGFTN 880

Query: 981  EVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQK--- 1037
            E+IP H +VKEAV PF KFQG D +LGPEM+STGEVMG+  +F  AF KA + + ++   
Sbjct: 881  EIIPTHFAVKEAVFPFAKFQGVDPMLGPEMKSTGEVMGVGETFGEAFYKAVLGSNERLPG 940

Query: 1038 LPLSGTV---FLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMH 1094
            LP  G V   FLS+ +  K ++  IA+  +  GFK+V+T+GT   L+  G+  E V K+ 
Sbjct: 941  LPTEGEVKYAFLSVRESDKKYIANIAQQLIAYGFKLVATNGTYQVLQEAGLECEAVNKVT 1000

Query: 1095 EGRPHAGDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAI 1154
            EGRPH  D + NG+I ++V T+ G    Q D   +RR  L  KV   TT++GA A  +A 
Sbjct: 1001 EGRPHIVDRLKNGEIHLIVNTTEGKQA-QYDSAMIRRAALQGKVYYTTTINGAEAVCQAF 1059


>gi|254524347|ref|ZP_05136402.1| carbamoyl-phosphate synthase, large subunit [Stenotrophomonas sp.
            SKA14]
 gi|219721938|gb|EED40463.1| carbamoyl-phosphate synthase, large subunit [Stenotrophomonas sp.
            SKA14]
          Length = 1090

 Score = 1264 bits (3272), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 628/1073 (58%), Positives = 805/1073 (75%), Gaps = 21/1073 (1%)

Query: 83   DQKLGKRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTD 142
            ++K+ KRTDL+ ILI+GAGPIVIGQACEFDYSG QACKAL++EGY V+L+NSNPATIMTD
Sbjct: 8    EKKMPKRTDLKTILIIGAGPIVIGQACEFDYSGAQACKALRDEGYRVVLVNSNPATIMTD 67

Query: 143  PGLADRTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIG 202
            P +AD  YI P+  + VE+++ KE+PDALLPTMGGQTALN A+ LA+ G LEKY VELIG
Sbjct: 68   PEMADAVYIEPINWQTVEKIIAKEKPDALLPTMGGQTALNCALDLADHGVLEKYNVELIG 127

Query: 203  AKLDAIKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGG 262
            AK +AI+ AEDR+LF+ AM  IG++ P + + +TLDE + I   +G +P IIRP+FTLGG
Sbjct: 128  AKREAIRMAEDRELFRVAMGEIGLECPTAAVAHTLDEALEIQTRVG-YPTIIRPSFTLGG 186

Query: 263  TGGGIAYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIEN 322
            +GGGIAYN+EE   I   GL  S T++VLVE+S+LGWKE+E+EV+RD ADN +I+CSIEN
Sbjct: 187  SGGGIAYNREELVEIVSRGLELSPTTEVLVEESVLGWKEFEMEVVRDTADNCIIVCSIEN 246

Query: 323  VDPMGVHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVM 382
            +DPMGVHTGDSITVAPAQTLTDKEYQRLRD SIA++R+IGV+ GGSNVQF +NP  G V+
Sbjct: 247  LDPMGVHTGDSITVAPAQTLTDKEYQRLRDASIAVLRKIGVDTGGSNVQFGINPKTGRVV 306

Query: 383  VIEMNPRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKK-TPASFEPSIDYVV 441
            VIEMNPRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ N+IT   TPASFEPSIDYVV
Sbjct: 307  VIEMNPRVSRSSALASKATGFPIAKVAAKLAVGYTLDELKNEITGGLTPASFEPSIDYVV 366

Query: 442  TKIPRFAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVK- 500
            TKIPRFAFEKFP ++  LTTQMKSVGE MA+GRTFQES QKALR LE G  G+  + +  
Sbjct: 367  TKIPRFAFEKFPAADARLTTQMKSVGEVMAMGRTFQESVQKALRGLETGKVGFDPTGLDL 426

Query: 501  ELDWDWEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQF 560
              + D + L+  L+ P P+R+  +  A + GM V+EI+ LSFID WFL Q +E+I  E  
Sbjct: 427  ANEEDLQTLRRELKAPGPERLFFVADAFRAGMSVEEIYALSFIDHWFLDQIEEIIAAEAE 486

Query: 561  LLTQSVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAE 620
            +    +  +      ++KR GFSD ++A  T + E  +R  R +  V P YKRVD+CA E
Sbjct: 487  VAAGGIDALDAARLRKLKRAGFSDARLAQLTGTNEAAIRALRRAHKVRPVYKRVDSCAGE 546

Query: 621  FEANTPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYET 680
            F   T Y+YS+Y+ ECE+APT + K++ILGGGPNRIGQGIEFDYCC H + +L+  GYET
Sbjct: 547  FSTGTAYLYSTYEDECEAAPTNRDKIMILGGGPNRIGQGIEFDYCCVHAALALREDGYET 606

Query: 681  IMMNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQ 740
            IM+N NPETVSTDYDTSDRLYFEPLT+EDVL +++LE+P+G+IVQ+GGQTPLKL+     
Sbjct: 607  IMVNCNPETVSTDYDTSDRLYFEPLTLEDVLEIVELEQPKGVIVQYGGQTPLKLA----- 661

Query: 741  YLDEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALA 800
                 R   A+G   V + GTSPDSID AEDRERF  ++ +L ++QP   IA+++ +AL 
Sbjct: 662  -----RALEANG---VPVIGTSPDSIDLAEDRERFQQLVDKLGLKQPPNRIARNDQEALL 713

Query: 801  IAKEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEID 860
            +A+EIGYP+VVRPSYVLGGRAMEIVY +  L  Y+ +AV+V  + PVL+D++L +A+E D
Sbjct: 714  LAREIGYPLVVRPSYVLGGRAMEIVYGESDLARYVRDAVKVSNDSPVLLDRFLDNAVECD 773

Query: 861  VDALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNV 920
            VD +AD  GNV+IGG+MEHIE+AGVHSGDS+C +P  ++S+     +    ++LAK LNV
Sbjct: 774  VDIIADKDGNVLIGGVMEHIEEAGVHSGDSSCSLPPYSLSAETQAELRRQVVELAKALNV 833

Query: 921  CGLMNCQYAITTSGD----VYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDL 976
             GLMN Q+AI +S +    +YLLE NPRASRTVPFVSKA G PLAK AA  M+G +L + 
Sbjct: 834  VGLMNTQFAIQSSDEGADTIYLLEVNPRASRTVPFVSKATGMPLAKIAARCMAGTTLAEQ 893

Query: 977  GFTKEVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQ 1036
            G TKE++P + SVKEA+ PF KFQG D +LGPEMRSTGEVMG+  +F  AFA+AQ A G 
Sbjct: 894  GATKEIVPDYYSVKEAIFPFAKFQGVDPILGPEMRSTGEVMGVGRTFNAAFARAQEAGGI 953

Query: 1037 KLPLSGTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEG 1096
            K P  G  F+S+ D  K  +  +AKA L  G+ +++T GTA +L+  G+  E + K+ EG
Sbjct: 954  KAPPVGKAFVSVRDPDKKRVLPVAKALLARGYSLIATRGTAAWLQQHGMDCEIINKVVEG 1013

Query: 1097 RPHAGDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALA 1149
            RPH  D + NG+I  +V T+ G S    D   +RR  L ++V   TT++GA A
Sbjct: 1014 RPHIVDSIKNGEIVYIVNTTEGRSAIN-DSFSIRREALQHRVTYSTTIAGAKA 1065


>gi|410464473|ref|ZP_11317903.1| carbamoyl-phosphate synthase, large subunit [Desulfovibrio magneticus
            str. Maddingley MBC34]
 gi|409982405|gb|EKO38864.1| carbamoyl-phosphate synthase, large subunit [Desulfovibrio magneticus
            str. Maddingley MBC34]
          Length = 1078

 Score = 1264 bits (3272), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 636/1092 (58%), Positives = 815/1092 (74%), Gaps = 27/1092 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++KI+I+G+GPIVIGQACEFDYSG+QA KALKEEGYEV+L+NSNPATIMTDPGLAD
Sbjct: 3    KRTDIKKIMIIGSGPIVIGQACEFDYSGSQAAKALKEEGYEVVLVNSNPATIMTDPGLAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
            RTYI P+ P  V +++ +ERPDALLPT+GGQT LN AVALAESG L++YGV+L+GA LD 
Sbjct: 63   RTYIEPIEPGTVARIIARERPDALLPTLGGQTGLNTAVALAESGVLDEYGVDLLGASLDV 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            IKKAE R+LF+ AM  IG+K P SGI +T+++       I  FP+I+RPA+TLGGTGGG+
Sbjct: 123  IKKAESRELFRIAMDNIGLKIPQSGICHTMEDVKEWGKRI-PFPIIVRPAYTLGGTGGGV 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+E+ E I   GLAAS+ S++++E+S++GWKE+ELEVMRD ADN VIICSIEN+DPMG
Sbjct: 182  AYNQEDLEKIASVGLAASMKSEIMLERSIIGWKEFELEVMRDKADNCVIICSIENIDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTD EYQ++R+ +IAI+REIGVE GGSNVQFAVNP DGE+++IEMN
Sbjct: 242  VHTGDSITVAPAQTLTDDEYQKMRNAAIAIMREIGVETGGSNVQFAVNPADGEMVIIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRF 447
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD+IPNDIT++T ASFEP+IDY V KIPRF
Sbjct: 302  PRVSRSSALASKATGFPIAKIAAKLAVGYTLDEIPNDITRETMASFEPTIDYCVVKIPRF 361

Query: 448  AFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSN-VKELDWDW 506
             FEKFPGSE  LTT MKSVGEAM++GR F+E+ QK LRSLE G +G+   N V E D D 
Sbjct: 362  TFEKFPGSEDYLTTAMKSVGEAMSIGRNFKEAMQKGLRSLEIGATGFSAINDVCEADRD- 420

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
              +  +LR PN  RM  +  AM+ G+ +++I E ++ID W+L QFKE++D+E  +     
Sbjct: 421  -TVLAALRRPNSRRMFQVREAMRCGVSLEDIFEATWIDPWYLRQFKEIVDMEARIAAFPK 479

Query: 567  SNMT------KDDFYEVKRRGFSDKQIA-FATKSTEKEVREKRLSLGVIPSYKRVDTCAA 619
              ++      ++   E K+ GFSD Q+A      +  + R+ R  +G+ P+Y  VDTCAA
Sbjct: 480  DKISPANAECRELIAEAKKNGFSDPQLATILGLPSSLDARKLRKDMGIAPTYYLVDTCAA 539

Query: 620  EFEANTPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYE 679
            EFEA TPY YS+Y+   E AP   +KV+ILGGGPNRIGQGIEFDYCCCH S++L+  G E
Sbjct: 540  EFEAYTPYYYSTYETGKEVAPKAARKVVILGGGPNRIGQGIEFDYCCCHASYALREMGVE 599

Query: 680  TIMMNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIH 739
            +IM+NSNPETVSTDYDTSDRLYFEPLT EDVLN++++E+PEG+IVQFGGQTPL L++P+ 
Sbjct: 600  SIMVNSNPETVSTDYDTSDRLYFEPLTFEDVLNILEVEKPEGVIVQFGGQTPLNLAVPLL 659

Query: 740  QYLDEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADAL 799
                         +  VRI GTSPDSID AE+RERF  ++++L + QP  G A +  DA 
Sbjct: 660  -------------NAGVRILGTSPDSIDRAENRERFQTLLQKLGLRQPDNGTAFTVEDAA 706

Query: 800  AIAKEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEI 859
             IA +IGYPVVVRPSYVLGGRAMEIVY    L  Y + AV    + P+LIDK+L +A E+
Sbjct: 707  TIADKIGYPVVVRPSYVLGGRAMEIVYDRADLENYFKVAVVASGKHPILIDKFLVNATEV 766

Query: 860  DVDALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLN 919
            DVDA++D   +  + G+MEHIE+AG+HSGDSAC++P  ++  + +  I   T+ LA+ L 
Sbjct: 767  DVDAVSDGT-DTYVAGVMEHIEEAGIHSGDSACVLPPHSLDPALIKEIERQTVALAEELG 825

Query: 920  VCGLMNCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFT 979
            V GLMN Q+A+   GD+Y+LE NPRASRT PFVSKA G PLAK A  V+ G+ L DL   
Sbjct: 826  VIGLMNIQFAV-KDGDIYILEVNPRASRTSPFVSKATGVPLAKLATKVIMGQKLKDLNPW 884

Query: 980  KEVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLP 1039
             E    + +VKE+V PF +F G DVLLGPEMRSTGEVMGID S  +AF K+Q+ AGQ LP
Sbjct: 885  VERKSGYYAVKESVFPFNRFPGVDVLLGPEMRSTGEVMGIDESVGLAFMKSQLGAGQVLP 944

Query: 1040 LSGTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPH 1099
              GTVFLS+ D  K  +   A+   ++GFKI++T GTA +L+ KGIAV  VLK+ EGRP+
Sbjct: 945  QHGTVFLSIADNAKDEVLPAAQILGELGFKILATKGTAAYLQEKGIAVTPVLKVFEGRPN 1004

Query: 1100 AGDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKS 1159
              D + N ++ ++V   S D     D + +R+  L Y +P  TT +GA A A+AIR L+ 
Sbjct: 1005 IVDHMKNREVDLVVNLVS-DKRTVRDSMSIRQTALLYGIPYTTTAAGARAMAQAIRELRG 1063

Query: 1160 NTVTMTALQDFF 1171
              +T+ +LQ+++
Sbjct: 1064 AGLTVKSLQEYY 1075


>gi|389711028|ref|ZP_10186901.1| carbamoyl-phosphate synthase large subunit [Acinetobacter sp. HA]
 gi|388610117|gb|EIM39250.1| carbamoyl-phosphate synthase large subunit [Acinetobacter sp. HA]
          Length = 1076

 Score = 1264 bits (3272), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 627/1076 (58%), Positives = 796/1076 (73%), Gaps = 24/1076 (2%)

Query: 86   LGKRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGL 145
            + KRTD++ ILI+GAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +
Sbjct: 1    MAKRTDIKSILIIGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPAM 60

Query: 146  ADRTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKL 205
            AD TYI P+T + V  ++EKERPDA+LPTMGGQTALN A+AL E G LEK+ VELIGA  
Sbjct: 61   ADATYIEPITWQTVAAIIEKERPDAVLPTMGGQTALNCALALDEHGILEKFNVELIGATK 120

Query: 206  DAIKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGG 265
            +AI+KAEDR LF QAM+ IG++ P + I  +++E + I    G FP+IIRP+FT+GG+GG
Sbjct: 121  EAIEKAEDRKLFDQAMRKIGLECPKADIAESMEEALEIQARFG-FPVIIRPSFTMGGSGG 179

Query: 266  GIAYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDP 325
            GIAYNKEEF  IC+ G   S T Q+L+++SL+GWKEYE+EV+RD  DN +I+C+IEN DP
Sbjct: 180  GIAYNKEEFIEICERGFDLSPTKQLLIDESLIGWKEYEMEVVRDKNDNCIIVCTIENFDP 239

Query: 326  MGVHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIE 385
            MGVHTGDSITVAPAQTLTDKE+Q LR+ S+A++REIGVE GGSNVQF +NP DG ++VIE
Sbjct: 240  MGVHTGDSITVAPAQTLTDKEFQLLRNASLAVLREIGVETGGSNVQFGINPKDGRMVVIE 299

Query: 386  MNPRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKI 444
            MNPRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT   TPASFEP+IDYVVTKI
Sbjct: 300  MNPRVSRSSALASKATGFPIAKIAAKLAVGYTLDELKNDITGGTTPASFEPAIDYVVTKI 359

Query: 445  PRFAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDW 504
            PRF FEKFP ++  LTTQMKSVGE MA+GR FQES QKALR LE G SG+        + 
Sbjct: 360  PRFNFEKFPQADATLTTQMKSVGEVMAIGRNFQESMQKALRGLEVGASGFDEKIEAGTEG 419

Query: 505  DWEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQ 564
              E++   L+VP P+R+  +  A + G  +DE+   + ID+WFL Q +++I  E  + T 
Sbjct: 420  AREKILQELKVPGPERIWYVGDAFRHGFTLDEVFAATNIDRWFLIQIEDIIKTENQIKTL 479

Query: 565  SVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEAN 624
               ++  D+    KR+G SD +IA     ++K+ R+ R +LGV P YKRVDTCAAEFE++
Sbjct: 480  GFGDLNADNIRGFKRKGLSDLRIANLMGISQKQFRKHRWNLGVTPVYKRVDTCAAEFESD 539

Query: 625  TPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMN 684
            T YMYS+YD ECE+ P+ + K++++GGGPNRIGQGIEFDYCC H + +++  GYETI++N
Sbjct: 540  TAYMYSTYDEECEANPSTRDKIMVIGGGPNRIGQGIEFDYCCVHAALAMREDGYETIIVN 599

Query: 685  SNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDE 744
             NPETVSTDYDTSDRLYFEP+T+EDVL ++ +E+P+GIIVQ+GGQTPLKL+    + L+E
Sbjct: 600  CNPETVSTDYDTSDRLYFEPITLEDVLEIVRIEKPKGIIVQYGGQTPLKLA----RALEE 655

Query: 745  HRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKE 804
               P         I GTSPD+ID AEDRERF  +I+ L + QP   I KS  + +A A +
Sbjct: 656  AGAP---------IIGTSPDAIDRAEDRERFQQMIQRLQLRQPNNSIVKSAEEGMAEASK 706

Query: 805  IGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDAL 864
            +GYP+VVRPSYVLGGRAMEIVY DE L  YL +AV+   E PVL+D++L DAIE+DVD +
Sbjct: 707  VGYPLVVRPSYVLGGRAMEIVYNDEELKRYLRDAVQASNEAPVLLDRFLDDAIEVDVDCV 766

Query: 865  ADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLM 924
            +D   +VVIGGIM+HIEQAG+HSGDSAC IP  ++S    D +   TI +AK L V GLM
Sbjct: 767  SDG-KDVVIGGIMQHIEQAGIHSGDSACSIPPYSLSKEIQDEMRRQTIAMAKELGVIGLM 825

Query: 925  NCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIP 984
            N Q+A+    DVY+LE NPRASRTVPFVSK IG  LAK AA  M+G+SL   GFT E+IP
Sbjct: 826  NVQFAVKGE-DVYILEVNPRASRTVPFVSKCIGESLAKVAARCMAGQSLESQGFTSEIIP 884

Query: 985  KHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQK---LPLS 1041
            +H SVKEAV PF KF G D +LGPEM+STGEVMG+  +F  AF KA + A ++   LP  
Sbjct: 885  EHFSVKEAVFPFNKFPGVDPILGPEMKSTGEVMGVGKTFGEAFYKAVLGANERLPGLPTE 944

Query: 1042 GTV---FLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRP 1098
            G V   F+S+ D  KP    IAK  +D+GFKI++T GT   +   G+  ERV K+ EGRP
Sbjct: 945  GEVKHAFISVRDSDKPRAAGIAKQLIDLGFKILATDGTFKVISEAGLECERVNKVTEGRP 1004

Query: 1099 HAGDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAI 1154
            +  D + NG+I +++ T+ G    Q D   +RR  L  KV   TT++GA A  +A+
Sbjct: 1005 NIVDRIKNGEIHLVINTTEGKKA-QEDSFSIRRSALQGKVYNTTTLNGADAVCQAL 1059


>gi|346724793|ref|YP_004851462.1| carbamoyl phosphate synthase large subunit [Xanthomonas axonopodis
            pv. citrumelo F1]
 gi|346649540|gb|AEO42164.1| carbamoyl phosphate synthase large subunit [Xanthomonas axonopodis
            pv. citrumelo F1]
          Length = 1080

 Score = 1264 bits (3272), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 629/1073 (58%), Positives = 804/1073 (74%), Gaps = 21/1073 (1%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTDL+ ILI+GAGPIVIGQACEFDYSG QACKAL++EGY V+L+NSNPATIMTDP +AD
Sbjct: 3    KRTDLKTILIIGAGPIVIGQACEFDYSGAQACKALRDEGYRVVLVNSNPATIMTDPNMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
              YI P+  + VE+++ KE+PDALLPTMGGQTALN A+ LA+ G LEKY VELIGAK +A
Sbjct: 63   AVYIEPINWQTVEKIIAKEKPDALLPTMGGQTALNCALDLADHGVLEKYNVELIGAKREA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I+ AEDR+LF+ AM  IG+  P + + +TL+E + I   +G +P IIRP+FTLGG+GGGI
Sbjct: 123  IRMAEDRELFRVAMGEIGLDCPTAAVAHTLEEALEIQTRVG-YPTIIRPSFTLGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EE   I   GL  S T++VLVE+S+LGWKE+E+EV+RD ADN +I+C+IEN+DPMG
Sbjct: 182  AYNREELIEIVGRGLELSPTTEVLVEESVLGWKEFEMEVVRDTADNCIIVCAIENLDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQRLRD SIA++R+IGV+ GGSNVQF ++P  G V+VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQRLRDASIAVLRKIGVDTGGSNVQFGISPTTGRVVVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKK-TPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ N+IT   TPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGYTLDELKNEITGGLTPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVK-ELDWD 505
            FAFEKFP ++  LTTQMKSVGE MA+GRTFQES QKALR LE G  G   + +    + D
Sbjct: 362  FAFEKFPQADARLTTQMKSVGEVMAMGRTFQESLQKALRGLETGKIGLDPTGLDLSSEDD 421

Query: 506  WEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQS 565
               LK  L+ P P+R+  +  A + GM V +++ LSFID WFL Q +E+I  EQ L    
Sbjct: 422  IATLKRELKAPGPERLFYVADAFRAGMTVADVYALSFIDPWFLDQIEEIISHEQQLADDG 481

Query: 566  VSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANT 625
            ++ +       +KR GFSD ++A    S E+ VR  R +L V P YKRVD+CAAEF  +T
Sbjct: 482  MAALDAPRLRMLKRAGFSDARMAQLIGSNEESVRTLRRALKVRPVYKRVDSCAAEFATST 541

Query: 626  PYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNS 685
             Y+YS+Y+ ECE+ PT + K++ILGGGPNRIGQGIEFDYCC H + +L+  G+ETIM+N 
Sbjct: 542  AYLYSTYEDECEALPTDRDKIMILGGGPNRIGQGIEFDYCCVHAALALRDDGFETIMVNC 601

Query: 686  NPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEH 745
            NPETVSTDYDTSDRLYFEPLT+EDVL +++LE+P+G+IVQ+GGQTPLKL+          
Sbjct: 602  NPETVSTDYDTSDRLYFEPLTLEDVLEIVELEKPKGVIVQYGGQTPLKLA---------- 651

Query: 746  RLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEI 805
            R   A+G   V + GTSPDSID AEDRERF  ++ +L ++QP   IA++  +AL +A+EI
Sbjct: 652  RALEANG---VPVIGTSPDSIDLAEDRERFQQLVDKLGLKQPPNRIARNAEEALVLAREI 708

Query: 806  GYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALA 865
            GYP+VVRPSYVLGGRAMEIVY +  L  Y+ +AV+V  + PVL+D++L +A+E+DVD +A
Sbjct: 709  GYPLVVRPSYVLGGRAMEIVYGESDLARYVRDAVKVSNDSPVLLDRFLDNAVEVDVDIIA 768

Query: 866  DSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMN 925
            D  GNV+IGG+MEHIE+AGVHSGDS+C +P  ++S      +    + LA+ LNV GLMN
Sbjct: 769  DKDGNVLIGGVMEHIEEAGVHSGDSSCSLPPYSLSPQTQAELRRQVVMLAEGLNVVGLMN 828

Query: 926  CQYAITT--SGD--VYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKE 981
             Q+A+    +GD  VYLLE NPRASRTVPFVSKAIG PLAK AA  M+GK+L + G TKE
Sbjct: 829  TQFAVQVNEAGDDIVYLLEVNPRASRTVPFVSKAIGMPLAKIAARCMAGKTLAEQGATKE 888

Query: 982  VIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLS 1041
            ++P + SVKEA+ PF KFQG D +LGPEMRSTGEVMG+  SF  AFA+AQ A G K P  
Sbjct: 889  IVPDYYSVKEAIFPFAKFQGVDPILGPEMRSTGEVMGVGRSFSAAFARAQEAGGIKAPPV 948

Query: 1042 GTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAG 1101
            G  F+S+ D  K  +  +A+A ++ GF +V+T GT  +L+  G++ E V K+ EGRPH  
Sbjct: 949  GKAFVSVRDPDKQRVLPVAQALVERGFTLVATRGTGAWLQQNGLSCEIVNKVAEGRPHIV 1008

Query: 1102 DMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAI 1154
            D + NG+I  +V T+ G +    D   +RR  L ++V   TTV+GA A  +++
Sbjct: 1009 DSIKNGEIVYIVNTTEGRAAIS-DSFSIRREALQHRVTYSTTVAGAKALVQSL 1060


>gi|344338490|ref|ZP_08769422.1| carbamoyl-phosphate synthase, large subunit [Thiocapsa marina 5811]
 gi|343801772|gb|EGV19714.1| carbamoyl-phosphate synthase, large subunit [Thiocapsa marina 5811]
          Length = 1069

 Score = 1264 bits (3272), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 639/1085 (58%), Positives = 795/1085 (73%), Gaps = 21/1085 (1%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD+  ILI+G+GPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDISSILIIGSGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+T   V  ++E+ERPDALLPTMGGQTALN A+ L   G LE++GVELIGA  +A
Sbjct: 63   ATYIEPVTWRAVSAIIERERPDALLPTMGGQTALNCALDLVREGVLERFGVELIGASREA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDRDLF++AM+ IG+  P S I ++L+E I +   IG FP IIRP+FT+GG+GGGI
Sbjct: 123  IDKAEDRDLFRKAMRKIGLDMPRSAIAHSLEEAIQVQASIG-FPTIIRPSFTMGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEFE IC+ GL  S T ++L+E+S LGWKE+E+EV+RD ADN +IICSIEN DPMG
Sbjct: 182  AYNQEEFEEICRRGLDLSPTKELLIEESALGWKEFEMEVVRDRADNCIIICSIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ +R+ SIA++REIGV+ GGSNVQFA+NP DG +++IEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQIMRNASIAVLREIGVDTGGSNVQFAINPADGRMIIIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ N+IT   TPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGYTLDELRNEITGGATPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            FAFEKFP ++  LTTQMKSVGE MA+GRTFQES QKA+R LE    G       +     
Sbjct: 362  FAFEKFPQADARLTTQMKSVGEVMAIGRTFQESLQKAVRGLEIDRDGLEPRVDPDDPEAL 421

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
              +++ LR    +R+  +  A + GM ++E+HELS ID WFL Q  +L+   + +    +
Sbjct: 422  RTIRHELRQTGAERIFYLADAFRFGMSLEEVHELSRIDPWFLAQIHDLVRAAREVAAGGL 481

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
            + ++      +KR+GFSD+++A  T +TEK +RE R S G+ P YKRVDTCAAEF ++T 
Sbjct: 482  NGLSPTILRALKRQGFSDRRLARLTGTTEKAIRELRWSRGIRPVYKRVDTCAAEFASSTA 541

Query: 627  YMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSN 686
            YMYS+Y+ ECE+ PT +KK+++LGGGPNRIGQGIEFDYCC H +F+L+  GYETIM+N N
Sbjct: 542  YMYSTYEEECEADPTDRKKIMVLGGGPNRIGQGIEFDYCCVHAAFALRDDGYETIMVNCN 601

Query: 687  PETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHR 746
            PETVSTDYDTSDRLYFEPLT+EDVL ++  E+P G+IVQ+GGQTPLKL+          R
Sbjct: 602  PETVSTDYDTSDRLYFEPLTLEDVLEIVAKEKPLGVIVQYGGQTPLKLA----------R 651

Query: 747  LPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEIG 806
               A+G   V I GTSPDSID AEDRERF  +I+EL I QP    A+SEA+A+  A  IG
Sbjct: 652  DLEAAG---VPIIGTSPDSIDLAEDRERFQQMIQELGIRQPPNATARSEAEAVERAARIG 708

Query: 807  YPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALAD 866
            YP+VVRPSYVLGGRAMEIVY +  L  Y+  AV V  E PVL+D++L DAIE+D+DA+ D
Sbjct: 709  YPLVVRPSYVLGGRAMEIVYDESELNRYMREAVRVSNESPVLLDRFLDDAIEVDIDAICD 768

Query: 867  SCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNC 926
               +V+IGGIMEHIEQAGVHSGDSAC +P  T+S S  D +    +++A  L V GLMN 
Sbjct: 769  G-KDVLIGGIMEHIEQAGVHSGDSACSLPPYTLSPSIQDRMREQMVQMAHALKVVGLMNA 827

Query: 927  QYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPKH 986
            Q+A+    DVY+LE NPRASRTVPFVSKAIG PLAK AA  M+G +L + G  +E +PKH
Sbjct: 828  QFAVKGE-DVYILEVNPRASRTVPFVSKAIGLPLAKVAARCMAGTTLAEQGIRRERMPKH 886

Query: 987  VSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLP-LSGTVF 1045
              VKEAV PF KF G D  LGPEM+STGEVMG+  SF  A+AKAQ  AG  LP L GT  
Sbjct: 887  YFVKEAVFPFIKFPGVDTQLGPEMKSTGEVMGVGESFGEAYAKAQEGAGTLLPRLGGTAL 946

Query: 1046 LSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVA 1105
            LS+    +  L R+A+  +  GF +  T GTA  L   G+    V K+ EGRPH  DM+ 
Sbjct: 947  LSVRLADRARLIRVARDLVGFGFTLYGTHGTAQSLRDAGLDCIGVNKVAEGRPHVVDMIK 1006

Query: 1106 NGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTVTMT 1165
            N  +  +V T+ G S    D   +RR  L +KV   TT+SGA A   A++ L  + +++ 
Sbjct: 1007 NNDVDFIVNTTEG-SQAIADSAAIRRSALQHKVSYTTTISGAEATCLALKQL--DILSVN 1063

Query: 1166 ALQDF 1170
             LQD 
Sbjct: 1064 RLQDL 1068


>gi|325925176|ref|ZP_08186589.1| carbamoyl-phosphate synthase large subunit [Xanthomonas perforans
            91-118]
 gi|325544430|gb|EGD15800.1| carbamoyl-phosphate synthase large subunit [Xanthomonas perforans
            91-118]
          Length = 1080

 Score = 1264 bits (3271), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 629/1073 (58%), Positives = 804/1073 (74%), Gaps = 21/1073 (1%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTDL+ ILI+GAGPIVIGQACEFDYSG QACKAL++EGY V+L+NSNPATIMTDP +AD
Sbjct: 3    KRTDLKTILIIGAGPIVIGQACEFDYSGAQACKALRDEGYRVVLVNSNPATIMTDPNMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
              YI P+  + VE+++ KE+PDALLPTMGGQTALN A+ LA+ G LEKY VELIGAK +A
Sbjct: 63   AVYIEPINWQTVEKIIAKEKPDALLPTMGGQTALNCALDLADHGVLEKYNVELIGAKREA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I+ AEDR+LF+ AM  IG+  P + + +TL+E + I   +G +P IIRP+FTLGG+GGGI
Sbjct: 123  IRMAEDRELFRVAMGEIGLDCPTAAVAHTLEEALEIQTRVG-YPTIIRPSFTLGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EE   I   GL  S T++VLVE+S+LGWKE+E+EV+RD ADN +I+C+IEN+DPMG
Sbjct: 182  AYNREELIEIVGRGLELSPTTEVLVEESVLGWKEFEMEVVRDTADNCIIVCAIENLDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQRLRD SIA++R+IGV+ GGSNVQF ++P  G V+VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQRLRDASIAVLRKIGVDTGGSNVQFGISPTTGRVVVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKK-TPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ N+IT   TPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGYTLDELKNEITGGLTPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVK-ELDWD 505
            FAFEKFP ++  LTTQMKSVGE MA+GRTFQES QKALR LE G  G   + +    + D
Sbjct: 362  FAFEKFPQADARLTTQMKSVGEVMAMGRTFQESLQKALRGLETGKIGLDPTGLDLSSEDD 421

Query: 506  WEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQS 565
               LK  L+ P P+R+  +  A + GM V +++ LSFID WFL Q +E+I  EQ L    
Sbjct: 422  IATLKRELKAPGPERLFYVADAFRAGMTVADVYALSFIDPWFLDQIEEIISHEQQLADDG 481

Query: 566  VSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANT 625
            ++ +       +KR GFSD ++A    S E+ VR  R +L V P YKRVD+CAAEF  +T
Sbjct: 482  MAALDAPRLRMLKRAGFSDARMAQLIGSNEESVRTLRRALKVRPVYKRVDSCAAEFGTST 541

Query: 626  PYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNS 685
             Y+YS+Y+ ECE+ PT + K++ILGGGPNRIGQGIEFDYCC H + +L+  G+ETIM+N 
Sbjct: 542  AYLYSTYENECEALPTGRDKIMILGGGPNRIGQGIEFDYCCVHAALALRDDGFETIMVNC 601

Query: 686  NPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEH 745
            NPETVSTDYDTSDRLYFEPLT+EDVL +++LE+P+G+IVQ+GGQTPLKL+          
Sbjct: 602  NPETVSTDYDTSDRLYFEPLTLEDVLEIVELEKPKGVIVQYGGQTPLKLA---------- 651

Query: 746  RLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEI 805
            R   A+G   V + GTSPDSID AEDRERF  ++ +L ++QP   IA++  +AL +A+EI
Sbjct: 652  RALEANG---VPVIGTSPDSIDLAEDRERFQQLVDKLGLKQPPNRIARNAEEALVLAREI 708

Query: 806  GYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALA 865
            GYP+VVRPSYVLGGRAMEIVY +  L  Y+ +AV+V  + PVL+D++L +A+E+DVD +A
Sbjct: 709  GYPLVVRPSYVLGGRAMEIVYGESDLARYVRDAVKVSNDSPVLLDRFLDNAVEVDVDIIA 768

Query: 866  DSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMN 925
            D  GNV+IGG+MEHIE+AGVHSGDS+C +P  ++S      +    + LA+ LNV GLMN
Sbjct: 769  DKDGNVLIGGVMEHIEEAGVHSGDSSCSLPPYSLSPQTQAELRRQVVMLAEGLNVVGLMN 828

Query: 926  CQYAITT--SGD--VYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKE 981
             Q+A+    +GD  VYLLE NPRASRTVPFVSKAIG PLAK AA  M+GK+L + G TKE
Sbjct: 829  TQFAVQVNEAGDDIVYLLEVNPRASRTVPFVSKAIGMPLAKIAARCMAGKTLAEQGATKE 888

Query: 982  VIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLS 1041
            ++P + SVKEA+ PF KFQG D +LGPEMRSTGEVMG+  SF  AFA+AQ A G K P  
Sbjct: 889  IVPDYYSVKEAIFPFAKFQGVDPILGPEMRSTGEVMGVGRSFSAAFARAQEAGGIKAPPV 948

Query: 1042 GTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAG 1101
            G  F+S+ D  K  +  +A+A ++ GF +V+T GT  +L+  G++ E V K+ EGRPH  
Sbjct: 949  GKAFVSVRDPDKQRVLPVAQALVERGFTLVATRGTGAWLQQNGLSCEIVNKVAEGRPHIV 1008

Query: 1102 DMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAI 1154
            D + NG+I  +V T+ G +    D   +RR  L ++V   TTV+GA A  +++
Sbjct: 1009 DSIKNGEIVYIVNTTEGRAAIS-DSFSIRREALQHRVTYSTTVAGAKALVQSL 1060


>gi|255318890|ref|ZP_05360116.1| carbamoyl-phosphate synthase, large subunit [Acinetobacter
            radioresistens SK82]
 gi|262378855|ref|ZP_06072012.1| carbamoyl-phosphate synthase, large subunit [Acinetobacter
            radioresistens SH164]
 gi|255304146|gb|EET83337.1| carbamoyl-phosphate synthase, large subunit [Acinetobacter
            radioresistens SK82]
 gi|262300140|gb|EEY88052.1| carbamoyl-phosphate synthase, large subunit [Acinetobacter
            radioresistens SH164]
          Length = 1076

 Score = 1264 bits (3271), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 625/1074 (58%), Positives = 794/1074 (73%), Gaps = 24/1074 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILI+GAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIKSILIIGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPAMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+T + V  ++EKERPDA+LPTMGGQTALN A+AL  +G LEKY VELIGA  +A
Sbjct: 63   ATYIEPITWQTVAAIIEKERPDAVLPTMGGQTALNCALALDANGVLEKYNVELIGATKEA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I+KAEDR LF QAM+ IG++ P + I  +++E + I    G FP+IIRP+FT+GG+GGGI
Sbjct: 123  IEKAEDRKLFDQAMRKIGLECPKAAIAESMEEALEIQARFG-FPVIIRPSFTMGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEF  IC+ G   S T Q+L+++SL+GWKEYE+EV+RD  DN +I+C+IEN DPMG
Sbjct: 182  AYNREEFLEICERGFDLSPTKQLLIDESLIGWKEYEMEVVRDKNDNCIIVCAIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGVE GGSNVQF +NP DG +++IEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQLMRNASLAVLREIGVETGGSNVQFGINPKDGRMVIIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT   TPASFEP+IDYVVTK+PR
Sbjct: 302  PRVSRSSALASKATGFPIAKIAAKLAVGYTLDELKNDITGGTTPASFEPAIDYVVTKVPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            F FEKFP ++  LTTQMKSVGE MA+GR FQES  KALR LE G SG+        +   
Sbjct: 362  FNFEKFPQADATLTTQMKSVGEVMAIGRNFQESVNKALRGLEVGASGFDEKIEVGTEGAR 421

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
            E++   L+VP P+R+  +  A + G  +DE+   + ID+WFL Q +++I+ E  + T   
Sbjct: 422  EKILQELKVPGPERIWYVADAFRHGFTLDEVFAATNIDRWFLVQIEDIINTENQIKTLGF 481

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
             ++  D+    KR+G SD +IA     ++K+ R+ R +LGV P YKRVDTCAAEFE++T 
Sbjct: 482  GDLNADNIRSFKRKGLSDLRIANLMGISQKQFRKHRWNLGVTPVYKRVDTCAAEFESDTA 541

Query: 627  YMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSN 686
            YMYS+YD ECES P+ + K++++GGGPNRIGQGIEFDYCC H + +++  GYETIM+N N
Sbjct: 542  YMYSTYDEECESNPSNRDKIMVIGGGPNRIGQGIEFDYCCVHAALAMREDGYETIMVNCN 601

Query: 687  PETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHR 746
            PETVSTDYDTSDRLYFEP+T+EDVL ++  E+P+GIIVQ+GGQTPLKL+    + L+E  
Sbjct: 602  PETVSTDYDTSDRLYFEPITLEDVLEIVRTEKPKGIIVQYGGQTPLKLA----RALEEAG 657

Query: 747  LPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEIG 806
             P         I GTSPD+ID AEDRERF  +I+ L + QP   I KS  + +A A ++G
Sbjct: 658  AP---------IIGTSPDAIDRAEDRERFQQMIQRLQLRQPNNSIVKSAEEGMAEAAKVG 708

Query: 807  YPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALAD 866
            YP+VVRPSYVLGGRAMEIVY DE L  YL +AV+   E PVL+D++L DAIE+DVD ++D
Sbjct: 709  YPLVVRPSYVLGGRAMEIVYNDEELKRYLRDAVQASNEAPVLLDRFLDDAIEVDVDCVSD 768

Query: 867  SCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNC 926
               +VVIGGIM+HIEQAG+HSGDSAC IP  ++S    D +   TI +AK L V GLMN 
Sbjct: 769  G-KDVVIGGIMQHIEQAGIHSGDSACSIPPYSLSKEVQDEMRRQTIAMAKELGVIGLMNV 827

Query: 927  QYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPKH 986
            Q+A+    DVY+LE NPRASRTVPFVSK IG  LAK AA  M+G+SL   GFT E+IP+H
Sbjct: 828  QFAV-KGDDVYILEVNPRASRTVPFVSKCIGESLAKVAARCMAGQSLESQGFTAEIIPEH 886

Query: 987  VSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQK---LPLSGT 1043
             SVKEAV PF KF G D +LGPEM+STGEVMG+  +F  AF KA + A ++   LP  G 
Sbjct: 887  FSVKEAVFPFNKFPGVDPILGPEMKSTGEVMGVGKTFGEAFYKAVLGANERLPGLPTEGE 946

Query: 1044 V---FLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHA 1100
            V   F+S+ D  KP    IAK  +D+GFKI++T GT   +   G+  ERV K+ EGRP+ 
Sbjct: 947  VKHAFISVRDSDKPRAVGIAKQLIDLGFKILATDGTFKVISEAGLECERVNKVTEGRPNI 1006

Query: 1101 GDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAI 1154
             D + NG+I +++ T+ G    Q D   +RR  L  KV   TT++GA A  +A+
Sbjct: 1007 VDRIKNGEIHLVINTTEGKKA-QEDSFSIRRSALQGKVYNTTTLNGADAVCQAL 1059


>gi|421464920|ref|ZP_15913609.1| carbamoyl-phosphate synthase, large subunit [Acinetobacter
            radioresistens WC-A-157]
 gi|400204849|gb|EJO35832.1| carbamoyl-phosphate synthase, large subunit [Acinetobacter
            radioresistens WC-A-157]
          Length = 1076

 Score = 1264 bits (3271), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 625/1074 (58%), Positives = 794/1074 (73%), Gaps = 24/1074 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILI+GAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIKSILIIGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPAMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+T + V  ++EKERPDA+LPTMGGQTALN A+AL  +G LEKY VELIGA  +A
Sbjct: 63   ATYIEPITWQTVAAIIEKERPDAVLPTMGGQTALNCALALDANGVLEKYNVELIGATKEA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I+KAEDR LF QAM+ IG++ P + I  +++E + I    G FP+IIRP+FT+GG+GGGI
Sbjct: 123  IEKAEDRKLFDQAMRKIGLECPKAAIAESMEEALEIQARFG-FPVIIRPSFTMGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEF  IC+ G   S T Q+L+++SL+GWKEYE+EV+RD  DN +I+C+IEN DPMG
Sbjct: 182  AYNREEFLEICERGFDLSPTKQLLIDESLIGWKEYEMEVVRDKNDNCIIVCAIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGVE GGSNVQF +NP DG +++IEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQLMRNASLAVLREIGVETGGSNVQFGINPKDGRMVIIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT   TPASFEP+IDYVVTK+PR
Sbjct: 302  PRVSRSSALASKATGFPIAKIAAKLAVGYTLDELKNDITGGTTPASFEPAIDYVVTKVPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            F FEKFP ++  LTTQMKSVGE MA+GR FQES  KALR LE G SG+        +   
Sbjct: 362  FNFEKFPQADATLTTQMKSVGEVMAIGRNFQESMNKALRGLEVGASGFDEKIEVGTEGAR 421

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
            E++   L+VP P+R+  +  A + G  +DE+   + ID+WFL Q +++I+ E  + T   
Sbjct: 422  EKILQELKVPGPERIWYVADAFRHGFTLDEVFAATNIDRWFLVQIEDIINTENQIKTLGF 481

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
             ++  D+    KR+G SD +IA     ++K+ R+ R +LGV P YKRVDTCAAEFE++T 
Sbjct: 482  GDLNADNIRSFKRKGLSDLRIANLMGISQKQFRKHRWNLGVTPVYKRVDTCAAEFESDTA 541

Query: 627  YMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSN 686
            YMYS+YD ECES P+ + K++++GGGPNRIGQGIEFDYCC H + +++  GYETIM+N N
Sbjct: 542  YMYSTYDEECESNPSNRDKIMVIGGGPNRIGQGIEFDYCCVHAALAMREDGYETIMVNCN 601

Query: 687  PETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHR 746
            PETVSTDYDTSDRLYFEP+T+EDVL ++  E+P+GIIVQ+GGQTPLKL+    + L+E  
Sbjct: 602  PETVSTDYDTSDRLYFEPITLEDVLEIVRTEKPKGIIVQYGGQTPLKLA----RALEEAG 657

Query: 747  LPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEIG 806
             P         I GTSPD+ID AEDRERF  +I+ L + QP   I KS  + +A A ++G
Sbjct: 658  AP---------IIGTSPDAIDRAEDRERFQQMIQRLQLRQPNNSIVKSAEEGMAEAAKVG 708

Query: 807  YPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALAD 866
            YP+VVRPSYVLGGRAMEIVY DE L  YL +AV+   E PVL+D++L DAIE+DVD ++D
Sbjct: 709  YPLVVRPSYVLGGRAMEIVYNDEELKRYLRDAVQASNEAPVLLDRFLDDAIEVDVDCVSD 768

Query: 867  SCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNC 926
               +VVIGGIM+HIEQAG+HSGDSAC IP  ++S    D +   TI +AK L V GLMN 
Sbjct: 769  G-KDVVIGGIMQHIEQAGIHSGDSACSIPPYSLSKEVQDEMRRQTIAMAKELGVIGLMNV 827

Query: 927  QYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPKH 986
            Q+A+    DVY+LE NPRASRTVPFVSK IG  LAK AA  M+G+SL   GFT E+IP+H
Sbjct: 828  QFAV-KGDDVYILEVNPRASRTVPFVSKCIGESLAKVAARCMAGQSLESQGFTAEIIPEH 886

Query: 987  VSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQK---LPLSGT 1043
             SVKEAV PF KF G D +LGPEM+STGEVMG+  +F  AF KA + A ++   LP  G 
Sbjct: 887  FSVKEAVFPFNKFPGVDPILGPEMKSTGEVMGVGKTFGEAFYKAVLGANERLPGLPTEGE 946

Query: 1044 V---FLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHA 1100
            V   F+S+ D  KP    IAK  +D+GFKI++T GT   +   G+  ERV K+ EGRP+ 
Sbjct: 947  VKHAFISVRDSDKPRAVGIAKQLIDLGFKILATDGTFKVISEAGLECERVNKVTEGRPNI 1006

Query: 1101 GDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAI 1154
             D + NG+I +++ T+ G    Q D   +RR  L  KV   TT++GA A  +A+
Sbjct: 1007 VDRIKNGEIHLVINTTEGKKA-QEDSFSIRRSALQGKVYNTTTLNGADAVCQAL 1059


>gi|294666705|ref|ZP_06731941.1| carbamoyl-phosphate synthase large subunit [Xanthomonas fuscans
            subsp. aurantifolii str. ICPB 10535]
 gi|292603530|gb|EFF46945.1| carbamoyl-phosphate synthase large subunit [Xanthomonas fuscans
            subsp. aurantifolii str. ICPB 10535]
          Length = 1080

 Score = 1264 bits (3271), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 629/1073 (58%), Positives = 804/1073 (74%), Gaps = 21/1073 (1%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTDL+ ILI+GAGPIVIGQACEFDYSG QACKAL++EGY V+L+NSNPATIMTDP +AD
Sbjct: 3    KRTDLKTILIIGAGPIVIGQACEFDYSGAQACKALRDEGYRVVLVNSNPATIMTDPNMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
              YI P+  + VE+++ KE+PDALLPTMGGQTALN A+ LA+ G LEKY VELIGAK +A
Sbjct: 63   AVYIEPINWQTVEKIIAKEKPDALLPTMGGQTALNCALDLADHGVLEKYNVELIGAKREA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I+ AEDR+LF+ AM  IG+  P + + +TL+E + I   +G +P IIRP+FTLGG+GGGI
Sbjct: 123  IRMAEDRELFRVAMGEIGLDCPTAAVAHTLEEALEIQTRVG-YPTIIRPSFTLGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EE   I   GL  S T++VLVE+S+LGWKE+E+EV+RD ADN +I+C+IEN+DPMG
Sbjct: 182  AYNREELIEIVGRGLELSPTTEVLVEESVLGWKEFEMEVVRDTADNCIIVCAIENLDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQRLRD SIA++R+IGV+ GGSNVQF ++P  G V+VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQRLRDASIAVLRKIGVDTGGSNVQFGISPTTGRVVVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKK-TPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ N+IT   TPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGYTLDELKNEITGGLTPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVK-ELDWD 505
            FAFEKFP ++  LTTQMKSVGE MA+GRTFQES QKALR LE G  G   + +    + D
Sbjct: 362  FAFEKFPQADARLTTQMKSVGEVMAMGRTFQESLQKALRGLETGKIGLDPTGLDLSSEDD 421

Query: 506  WEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQS 565
               LK  L+ P P+R+  +  A + GM V +++ LSFID WFL Q +E+I  EQ L    
Sbjct: 422  IATLKRELKAPGPERLFYVADAFRAGMTVADVYALSFIDPWFLDQIEEIISHEQQLADDG 481

Query: 566  VSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANT 625
            ++ +       +KR GFSD ++A    S E+ VR  R +L V P YKRVD+CAAEF  +T
Sbjct: 482  MAALDAPRLRMLKRAGFSDARMAQLIGSNEESVRTLRRALKVRPVYKRVDSCAAEFGTST 541

Query: 626  PYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNS 685
             Y+YS+Y+ ECE+ PT + K++ILGGGPNRIGQGIEFDYCC H + +L+  G+ETIM+N 
Sbjct: 542  AYLYSTYEDECEALPTDRDKIMILGGGPNRIGQGIEFDYCCVHAALALRDDGFETIMVNC 601

Query: 686  NPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEH 745
            NPETVSTDYDTSDRLYFEPLT+EDVL +++LE+P+G+IVQ+GGQTPLKL+          
Sbjct: 602  NPETVSTDYDTSDRLYFEPLTLEDVLEIVELEKPKGVIVQYGGQTPLKLA---------- 651

Query: 746  RLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEI 805
            R   A+G   V + GTSPDSID AEDRERF  ++ +L ++QP   IA++  +AL +A+EI
Sbjct: 652  RALEANG---VPVIGTSPDSIDLAEDRERFQQLVDKLGLKQPPNRIARNAEEALVLAREI 708

Query: 806  GYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALA 865
            GYP+VVRPSYVLGGRAMEIVY +  L  Y+ +AV+V  + PVL+D++L +A+E+DVD +A
Sbjct: 709  GYPLVVRPSYVLGGRAMEIVYGESDLARYVRDAVKVSNDSPVLLDRFLDNAVEVDVDIIA 768

Query: 866  DSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMN 925
            D  GNV+IGG+MEHIE+AGVHSGDS+C +P  ++S      +    + LA+ LNV GLMN
Sbjct: 769  DKDGNVLIGGVMEHIEEAGVHSGDSSCSLPPYSLSPQTQAELRRQVVMLAEGLNVVGLMN 828

Query: 926  CQYAITT--SGD--VYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKE 981
             Q+A+    +GD  VYLLE NPRASRTVPFVSKAIG PLAK AA  M+GK+L + G TKE
Sbjct: 829  TQFAVQVNEAGDDIVYLLEVNPRASRTVPFVSKAIGMPLAKIAARCMAGKTLAEQGATKE 888

Query: 982  VIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLS 1041
            ++P + SVKEA+ PF KFQG D +LGPEMRSTGEVMG+  SF  AFA+AQ A G K P  
Sbjct: 889  IVPDYYSVKEAIFPFAKFQGVDPILGPEMRSTGEVMGVGRSFSAAFARAQEAGGIKAPPL 948

Query: 1042 GTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAG 1101
            G  F+S+ D  K  +  +A+A ++ GF +V+T GT  +L+  G++ E V K+ EGRPH  
Sbjct: 949  GKAFVSVRDPDKQRVLPVAQALVERGFTLVATRGTGAWLQQNGLSCEIVNKVAEGRPHIV 1008

Query: 1102 DMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAI 1154
            D + NG+I  +V T+ G +    D   +RR  L ++V   TTV+GA A  +++
Sbjct: 1009 DSIKNGEIVYIVNTTEGRAAIS-DSFSIRREALQHRVTYSTTVAGAKALVQSL 1060


>gi|262278056|ref|ZP_06055841.1| carbamoyl-phosphate synthase large subunit [Acinetobacter
            calcoaceticus RUH2202]
 gi|262258407|gb|EEY77140.1| carbamoyl-phosphate synthase large subunit [Acinetobacter
            calcoaceticus RUH2202]
          Length = 1076

 Score = 1264 bits (3271), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 628/1080 (58%), Positives = 796/1080 (73%), Gaps = 36/1080 (3%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILI+GAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIKSILIIGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPSMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+T + V Q++EKERPDA+LPTMGGQTALN A+AL E G L KY VELIGA  +A
Sbjct: 63   ATYIEPITWQTVAQIIEKERPDAVLPTMGGQTALNCALALDEHGVLAKYNVELIGASKEA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I+KAEDR LF  AM+ IG++ P + I  T++E ++I +  G FP+IIRP+FT+GG+GGGI
Sbjct: 123  IEKAEDRKLFDIAMRKIGLECPKAAIAETMEEALTIQSRFG-FPVIIRPSFTMGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEF  IC+ G   S T Q+L+++SL+GWKEYE+EV+RD  DN +I+C+IEN DPMG
Sbjct: 182  AYNREEFLEICERGFDLSPTHQLLIDESLIGWKEYEMEVVRDKNDNCIIVCAIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGVE GGSNVQF +NP DG ++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQLMRNASVAVLREIGVETGGSNVQFGINPKDGRMVVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKK-TPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT   TPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKIAAKLAVGYTLDELKNDITGGVTPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGW------GCSNVK 500
            F FEKFP +EP+LTTQMKSVGE MA+GR FQES QKALR LE G SG+      G +N K
Sbjct: 362  FNFEKFPQAEPVLTTQMKSVGEVMAIGRNFQESVQKALRGLEVGVSGFDEKIEAGATNAK 421

Query: 501  ELDWDWEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQF 560
                  E +   L+VP P+R+  I  A + G  +DE+ E + ID+WFL Q ++++  E  
Sbjct: 422  ------ETILKELKVPGPERIWYIADAFRHGFSLDEVFEATKIDRWFLIQIQDIVKTEAE 475

Query: 561  LLTQSVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAE 620
            + +    ++  D+    KR+G SD +IA     ++K+ R++R +LGV P YKRVDTCAAE
Sbjct: 476  VKSLGFGDLNADNIRAFKRKGLSDLRIADLMGISQKQFRKQRWNLGVYPVYKRVDTCAAE 535

Query: 621  FEANTPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYET 680
            FE+ T YMYS+YD ECE+ P+ + K++++GGGPNRIGQGIEFDYCC H + +++  GYET
Sbjct: 536  FESGTAYMYSTYDEECEANPSNRDKIMVIGGGPNRIGQGIEFDYCCVHAALAMREDGYET 595

Query: 681  IMMNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQ 740
            IM+N NPETVSTDYDTSDRLYFEP+T+EDVL ++  E+P+G+IVQ+GGQTPLKL+    +
Sbjct: 596  IMVNCNPETVSTDYDTSDRLYFEPVTLEDVLEIVRTEKPKGVIVQYGGQTPLKLA----R 651

Query: 741  YLDEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALA 800
             L+E   P         I GTSPD+ID AEDRERF  +I+ L + QP   I KS  + ++
Sbjct: 652  ALEEAGTP---------IIGTSPDAIDRAEDRERFQQMIQRLQLRQPNNSIVKSAEEGIS 702

Query: 801  IAKEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEID 860
             A ++GYP+VVRPSYVLGGRAMEIVY +E L  YL  AV+   E PVL+D++L DA E+D
Sbjct: 703  EAAKVGYPLVVRPSYVLGGRAMEIVYNEEELKRYLREAVQASNEAPVLLDRFLDDATEVD 762

Query: 861  VDALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNV 920
            VD ++D   +VVIGGIM+HIEQAG+HSGDSAC IP  ++S    D +   T+ +AK L V
Sbjct: 763  VDCVSDG-KDVVIGGIMQHIEQAGIHSGDSACSIPPYSLSKEIQDEMRRQTVAMAKELGV 821

Query: 921  CGLMNCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTK 980
             GLMN Q+A+    DVY+LE NPRASRTVPFVSK IG  LAK AA  M+G+SL   GFTK
Sbjct: 822  VGLMNVQFAV-KGDDVYILEVNPRASRTVPFVSKCIGDSLAKVAARCMAGQSLESQGFTK 880

Query: 981  EVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQK--- 1037
            E+IP H +VKEAV PF KFQG D +LGPEM+STGEVMG+  +F  AF KA + + ++   
Sbjct: 881  EIIPTHFAVKEAVFPFAKFQGVDPMLGPEMKSTGEVMGVGKTFGEAFYKAVLGSNERLPG 940

Query: 1038 LPLSGTV---FLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMH 1094
            LP  G V   FLS+ +  K ++  IAK     GFK+++T GT   L+  G+  E V K+ 
Sbjct: 941  LPTEGEVKHAFLSVRESDKKYIADIAKKLAAYGFKLIATGGTYQVLKEAGLECESVNKVT 1000

Query: 1095 EGRPHAGDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAI 1154
            EGRPH  D + NG+I ++V T+ G    Q D   +RR  L  KV   TT++GA A  +A 
Sbjct: 1001 EGRPHIVDRLKNGEIHLIVNTTEGKQA-QYDSAMIRRAALQGKVYYTTTINGAEAVCQAF 1059


>gi|385332818|ref|YP_005886769.1| carbamoyl-phosphate synthase large subunit [Marinobacter adhaerens
            HP15]
 gi|311695968|gb|ADP98841.1| carbamoyl-phosphate synthase, large subunit [Marinobacter adhaerens
            HP15]
          Length = 1072

 Score = 1264 bits (3271), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 630/1086 (58%), Positives = 814/1086 (74%), Gaps = 23/1086 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILILGAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIQSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPVMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+T + VE+++EKE+PDALLPTMGGQTALN A+ L   G LEK+GVE+IGA  D 
Sbjct: 63   ATYIEPITWKTVEKIIEKEQPDALLPTMGGQTALNCALDLERHGILEKHGVEMIGANADT 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDRD F +AMK IG++ P + I ++++E   +A++IG FP IIRP+FT+GG+GGGI
Sbjct: 123  IDKAEDRDRFDKAMKKIGLECPRATIAHSMEEAWKVADDIG-FPCIIRPSFTMGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN++EFE IC  GL  S T+++L+++SL+GWKEYE+EV+RD  DN +I+C+IEN D MG
Sbjct: 182  AYNRDEFEEICTRGLDLSPTNELLIDESLIGWKEYEMEVVRDKNDNCIIVCAIENFDAMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGVE GGSNVQF +NP  G ++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQIMRNASLAVLREIGVETGGSNVQFGMNPDTGRMVVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKK-TPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ N+IT   TPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGYTLDELRNEITGGVTPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWD- 505
            F FEKFP ++  LTTQMKSVGE MA+GRTFQES QKALR LE G  G+    +++LD + 
Sbjct: 362  FTFEKFPQADARLTTQMKSVGEVMAIGRTFQESLQKALRGLEVGSEGFD-EKLEDLDSEN 420

Query: 506  -WEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQ 564
              E L   L VP  DR+  I  A + GM V+++HE + +D W+L Q ++LI  EQ L + 
Sbjct: 421  SRETLTRELNVPGADRIWYIGDAFRAGMTVEDLHEHTHVDPWYLVQIEDLIREEQALKSA 480

Query: 565  SVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEAN 624
              +++ +   + +KR+GFSD ++A     +E  +R+ R  L + P YKRVDTCAAEF ++
Sbjct: 481  GKADIDQATLFRLKRKGFSDARLAKLLGISEVSLRKLRHDLDIRPVYKRVDTCAAEFASD 540

Query: 625  TPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMN 684
            T YMYS+Y+ ECES  + ++K++++GGGPNRIGQGIEFDYCC H + +++  GYETIM+N
Sbjct: 541  TAYMYSTYEEECESDASDREKIVVIGGGPNRIGQGIEFDYCCVHAALAMREDGYETIMIN 600

Query: 685  SNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDE 744
             NPETVSTDYDTSDRLYFEP+T+EDVL +I +E+P+G+IVQ+GGQTPLKL+         
Sbjct: 601  CNPETVSTDYDTSDRLYFEPITLEDVLEIIHVEKPKGVIVQYGGQTPLKLA--------- 651

Query: 745  HRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKE 804
             R   A+G   V I GTSPD+ID AEDRERF  +I  L ++QP+    +S  + +  A+E
Sbjct: 652  -RGLEAAG---VPIIGTSPDAIDRAEDRERFQQMITRLGLKQPENATVRSHEEGILAARE 707

Query: 805  IGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDAL 864
            IGYP+VVRPSYVLGGRAMEIVY +E LV Y+ NAV V  + PVL+D +L+ AIE+D+DA+
Sbjct: 708  IGYPLVVRPSYVLGGRAMEIVYDEEELVRYMRNAVLVSNDSPVLLDHFLNAAIEVDIDAI 767

Query: 865  ADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLM 924
            +D   +VVIGGIM+HIEQAGVHSGDSAC +P  T+S    D +     K+A  L+V GLM
Sbjct: 768  SDG-KDVVIGGIMQHIEQAGVHSGDSACSLPPYTLSQQVQDEMRDAVKKMAIELDVVGLM 826

Query: 925  NCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIP 984
            N Q A    G++Y++E NPRASRTVPFVSKAIG  LAK AA VM+GK+L +L FT+E+IP
Sbjct: 827  NVQLA-WQDGEIYVIEVNPRASRTVPFVSKAIGVSLAKVAARVMAGKTLKELEFTQEIIP 885

Query: 985  KHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTV 1044
             + +VKE+V PF KF   D +LGPEM+STGEVMG+  SF  AFAKA +A G++LP  GT 
Sbjct: 886  SYYAVKESVFPFNKFPAVDPILGPEMKSTGEVMGLGDSFDEAFAKAALAVGERLPAKGTA 945

Query: 1045 FLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMV 1104
            F+S+ D+ KP   ++A+  +D GFK+V+T+GTA  L+  GI V+RV K+ EGRPH  D +
Sbjct: 946  FMSVRDVDKPGAAKVARDLVDAGFKLVATTGTAKALKEAGIEVDRVNKVREGRPHIVDAI 1005

Query: 1105 ANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTVTM 1164
             NGQ+Q+++ T+ G      D  ++R+  L  KV   TT++G  A   AI+     TV  
Sbjct: 1006 KNGQVQLIINTTEGRKAIS-DSAQIRQSALQTKVTYTTTLAGGEAFCRAIKFGPERTVRR 1064

Query: 1165 TALQDF 1170
              LQD 
Sbjct: 1065 --LQDL 1068


>gi|421857645|ref|ZP_16289974.1| carbamoyl-phosphate synthase large chain [Acinetobacter
            radioresistens DSM 6976 = NBRC 102413]
 gi|403186908|dbj|GAB76175.1| carbamoyl-phosphate synthase large chain [Acinetobacter
            radioresistens DSM 6976 = NBRC 102413]
          Length = 1076

 Score = 1264 bits (3271), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 625/1074 (58%), Positives = 795/1074 (74%), Gaps = 24/1074 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILI+GAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIKSILIIGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPAMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+T + V  ++EKERPDA+LPTMGGQTALN A+AL  +G LEKY VELIGA  +A
Sbjct: 63   ATYIEPITWQTVAAIIEKERPDAVLPTMGGQTALNCALALDANGVLEKYNVELIGATKEA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I+KAEDR LF QAM+ IG++ P + I  +++E + I    G FP+IIRP+FT+GG+GGGI
Sbjct: 123  IEKAEDRKLFDQAMRKIGLECPKAAIAESMEEALEIQARFG-FPVIIRPSFTMGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEF  IC+ G   S T Q+L+++SL+GWKEYE+EV+RD  DN +I+C+IEN DPMG
Sbjct: 182  AYNREEFLEICERGFDLSPTKQLLIDESLIGWKEYEMEVVRDKNDNCIIVCAIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGVE GGSNVQF +NP DG +++IEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQLMRNASLAVLREIGVETGGSNVQFGINPKDGRMVIIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT   TPASFEP+IDYVVTK+PR
Sbjct: 302  PRVSRSSALASKATGFPIAKIAAKLAVGYTLDELKNDITGGTTPASFEPAIDYVVTKVPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            F FEKFP ++  LTTQMKSVGE MA+GR FQES  KALR LE G SG+        +   
Sbjct: 362  FNFEKFPQADATLTTQMKSVGEVMAIGRNFQESVNKALRGLEVGASGFDEKIEVGTEGAR 421

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
            E++   L+VP P+R+  +  A + G  +DE+   + ID+WFL Q +++I+ E  + T   
Sbjct: 422  EKILQELKVPGPERIWYVADAFRHGFTLDEVFAATNIDRWFLVQIEDIINTENQIKTLGF 481

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
             ++  D+    KR+G SD +IA     ++K+ R+ R +LGV P YKRVDTCAAEFE++T 
Sbjct: 482  GDLNADNIRSFKRKGLSDLRIANLMGISQKQFRKHRWNLGVTPVYKRVDTCAAEFESDTA 541

Query: 627  YMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSN 686
            YMYS+YD ECES P+ + K++++GGGPNRIGQGIEFDYCC H + +++  GYETIM+N N
Sbjct: 542  YMYSTYDEECESNPSNRDKIMVIGGGPNRIGQGIEFDYCCVHAALAMREDGYETIMVNCN 601

Query: 687  PETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHR 746
            PETVSTDYDTSDRLYFEP+T+EDVL ++  E+P+GIIVQ+GGQTPLKL+    + L+E  
Sbjct: 602  PETVSTDYDTSDRLYFEPITLEDVLEIVRTEKPKGIIVQYGGQTPLKLA----RALEEAG 657

Query: 747  LPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEIG 806
             P         I GTSPD+ID AEDRERF  +I+ L + QP   I KS  + +A A ++G
Sbjct: 658  AP---------IIGTSPDAIDRAEDRERFQQMIQRLQLRQPNNSIVKSAEEGMAEAAKVG 708

Query: 807  YPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALAD 866
            YP+VVRPSYVLGGRAMEIVY DE L  YL +AV+   E PVL+D++L DAIE+DVD ++D
Sbjct: 709  YPLVVRPSYVLGGRAMEIVYNDEELKRYLRDAVQASNEAPVLLDRFLDDAIEVDVDCVSD 768

Query: 867  SCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNC 926
               +VVIGGIM+HIEQAG+HSGDSAC IP  ++S+   D +   TI +AK L V GLMN 
Sbjct: 769  G-KDVVIGGIMQHIEQAGIHSGDSACSIPPYSLSNEVQDEMRRQTIAMAKELGVIGLMNV 827

Query: 927  QYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPKH 986
            Q+A+    DVY+LE NPRASRTVPFVSK IG  LAK AA  M+G+SL   GFT E+IP+H
Sbjct: 828  QFAV-KGDDVYILEVNPRASRTVPFVSKCIGESLAKVAARCMAGQSLESQGFTAEIIPEH 886

Query: 987  VSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQK---LPLSGT 1043
             SVKEAV PF KF G D +LGPEM+STGEVMG+  +F  AF KA + A ++   LP  G 
Sbjct: 887  FSVKEAVFPFNKFPGVDPILGPEMKSTGEVMGVGKTFGEAFYKAVLGANERLPGLPTEGE 946

Query: 1044 V---FLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHA 1100
            V   F+S+ D  KP    IAK  +D+GFKI++T GT   +   G+  ERV K+ EGRP+ 
Sbjct: 947  VKHAFISVRDSDKPRAVGIAKQLIDLGFKILATDGTFKVISEAGLECERVNKVTEGRPNI 1006

Query: 1101 GDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAI 1154
             D + NG+I +++ T+ G    Q D   +RR  L  KV   TT++GA A  +A+
Sbjct: 1007 VDRIKNGEIHLVINTTEGKKA-QEDSFSIRRSALQGKVYNTTTLNGADAVCQAL 1059


>gi|262371952|ref|ZP_06065231.1| carbamoyl-phosphate synthase, large subunit [Acinetobacter junii
            SH205]
 gi|262311977|gb|EEY93062.1| carbamoyl-phosphate synthase, large subunit [Acinetobacter junii
            SH205]
          Length = 1077

 Score = 1264 bits (3270), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 625/1080 (57%), Positives = 797/1080 (73%), Gaps = 36/1080 (3%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILI+GAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIKSILIIGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPSMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+T + V Q++EKERPDA+LPTMGGQTALN A+AL  +G LEKY VELIGA  +A
Sbjct: 63   ATYIEPITWQTVAQIIEKERPDAVLPTMGGQTALNCALALDANGILEKYNVELIGASKEA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I+KAEDR LF  AM+ IG++ P + +  +++  + I    G FP+IIRP+FT+GG+GGGI
Sbjct: 123  IEKAEDRKLFDIAMRKIGLECPRADVAESMEHALEIQARFG-FPVIIRPSFTMGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYNKEEF  IC+ G   S T Q+L+++SL+GWKEYE+EV+RD  DN +I+C+IEN DPMG
Sbjct: 182  AYNKEEFIEICERGFDLSPTKQLLIDESLIGWKEYEMEVVRDKNDNCIIVCAIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGVE GGSNVQF +NP DG ++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQIMRNASVAVLREIGVETGGSNVQFGINPKDGRMVVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKK-TPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT   TPASFEP+IDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKIAAKLAVGYTLDELKNDITGGVTPASFEPAIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGW------GCSNVK 500
            F FEKFP +EP+LTTQMKSVGE MA+GR FQES QKALR LE G SG+      G +N K
Sbjct: 362  FNFEKFPQAEPVLTTQMKSVGEVMAIGRNFQESVQKALRGLEVGVSGFDEKIEVGTANAK 421

Query: 501  ELDWDWEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQF 560
            ++      +   L+VP PDR+  +  A + G  +DE+ E + ID+WFL Q ++++  E  
Sbjct: 422  DI------ILKELKVPGPDRIWYVADAFRHGFSLDEVFEATKIDRWFLIQIEDIVKTEAQ 475

Query: 561  LLTQSVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAE 620
            + T    ++  D+    KR+G SD +IA     ++K+ R++R +LGV P YKRVDTCAAE
Sbjct: 476  VKTLGFGDLNADNIRSFKRKGLSDLRIADLMGISQKQFRKQRWNLGVYPVYKRVDTCAAE 535

Query: 621  FEANTPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYET 680
            FE+ T YMYS+YD ECE+ P+ + K++++GGGPNRIGQGIEFDYCC H + +++  GYET
Sbjct: 536  FESGTAYMYSTYDEECEANPSSRDKIMVIGGGPNRIGQGIEFDYCCVHAALAMRDDGYET 595

Query: 681  IMMNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQ 740
            IM+N NPETVSTDYDTSDRLYFEP+T+EDVL ++  E+P+G+IVQ+GGQTPLKL+    +
Sbjct: 596  IMVNCNPETVSTDYDTSDRLYFEPVTLEDVLEIVRTEKPKGVIVQYGGQTPLKLA----R 651

Query: 741  YLDEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALA 800
             L+E   P         I GTSPD+ID AEDRERF  +I+ L + QP   I KS  + ++
Sbjct: 652  ALEEAGTP---------IIGTSPDAIDRAEDRERFQQMIQRLQLRQPNNSIVKSAEEGIS 702

Query: 801  IAKEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEID 860
             A ++GYP+VVRPSYVLGGRAMEIVY +E L  YL  AV+   E PVL+D++L DA E+D
Sbjct: 703  EAAKVGYPLVVRPSYVLGGRAMEIVYNEEELKRYLREAVQASNEAPVLLDRFLDDATEVD 762

Query: 861  VDALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNV 920
            VD ++D   +VVIGGIM+HIEQAG+HSGDSAC IP  ++S    D +   T+ +AK L V
Sbjct: 763  VDCVSDG-KDVVIGGIMQHIEQAGIHSGDSACSIPPYSLSQEVQDEMRRQTVAMAKELGV 821

Query: 921  CGLMNCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTK 980
             GLMN Q+A+    D+Y+LE NPRASRTVPFVSK IG  LAK AA  M+G+SL   GFTK
Sbjct: 822  VGLMNVQFAV-KGNDIYVLEVNPRASRTVPFVSKCIGESLAKVAARCMAGQSLESQGFTK 880

Query: 981  EVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQK--- 1037
            E+IP H +VKEAV PF KFQG D +LGPEM+STGEVMG+  +F  AF KA + + ++   
Sbjct: 881  EIIPTHFAVKEAVFPFAKFQGVDPMLGPEMKSTGEVMGVGETFGEAFYKAVLGSNERLPG 940

Query: 1038 LPLSGTV---FLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMH 1094
            LP  G V   FLS+ +  K ++  IAK  +  GFK+V+T+GT   L+  G+  E V K+ 
Sbjct: 941  LPTEGEVKYAFLSVRESDKKYIANIAKQLIAYGFKLVATNGTYQVLQEAGLECEAVNKVT 1000

Query: 1095 EGRPHAGDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAI 1154
            EGRPH  D + NG+I ++V T+ G    Q D   +RR  L  KV   TT++GA A  +A 
Sbjct: 1001 EGRPHIVDRLKNGEIHLIVNTTEGKQA-QYDSAMIRRAALQGKVYYTTTINGAEAVCQAF 1059


>gi|325915492|ref|ZP_08177805.1| carbamoyl-phosphate synthase large subunit [Xanthomonas vesicatoria
            ATCC 35937]
 gi|325538293|gb|EGD09976.1| carbamoyl-phosphate synthase large subunit [Xanthomonas vesicatoria
            ATCC 35937]
          Length = 1080

 Score = 1264 bits (3270), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 628/1068 (58%), Positives = 803/1068 (75%), Gaps = 21/1068 (1%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTDL+ ILI+GAGPIVIGQACEFDYSG QACKAL++EGY V+L+NSNPATIMTDP +AD
Sbjct: 3    KRTDLKTILIIGAGPIVIGQACEFDYSGAQACKALRDEGYRVVLVNSNPATIMTDPDMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
              YI P+  + VE+++ KE+PDALLPTMGGQTALN A+ LA++G LEKY VELIGAK +A
Sbjct: 63   AVYIEPINWQTVEKIIAKEKPDALLPTMGGQTALNCALDLADNGVLEKYNVELIGAKREA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I+ AEDR+LF+ AM  IG+  P + + +TL+E + I   +G +P IIRP+FTLGG+GGGI
Sbjct: 123  IRMAEDRELFRVAMGEIGLDCPKAEVAHTLEEALDIQTRVG-YPTIIRPSFTLGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EE   I   GL  S T++VLVE+S+LGWKE+E+EV+RD ADN +I+C+IEN+DPMG
Sbjct: 182  AYNREELIEIVGRGLELSPTTEVLVEESVLGWKEFEMEVVRDTADNCIIVCAIENLDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQRLRD SIA++R+IGV+ GGSNVQF ++P  G V+VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQRLRDASIAVLRKIGVDTGGSNVQFGISPTTGRVVVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKK-TPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ N+IT   TPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGYTLDELRNEITGGLTPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVK-ELDWD 505
            FAFEKFP ++  LTTQMKSVGE MA+GRTFQES QKALR LE G  G   + +    + D
Sbjct: 362  FAFEKFPQADARLTTQMKSVGEVMAMGRTFQESLQKALRGLETGKIGLDPTGLDLGSEED 421

Query: 506  WEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQS 565
               LK  L+ P P+R+  +  A + GM V E++ LSFID WFL Q +ELI  EQ L    
Sbjct: 422  MAALKRELKAPGPERLFYVADAFRAGMTVAEVYALSFIDPWFLDQIEELISHEQQLADDG 481

Query: 566  VSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANT 625
            ++ +      ++KR GFSD ++A    + E+ VR  R +L V P YKRVD+CAAEF  +T
Sbjct: 482  MAALDAPRLRKLKRAGFSDARLAELIGTNEEAVRTLRRALKVRPVYKRVDSCAAEFSTST 541

Query: 626  PYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNS 685
             Y+YS+Y+ ECE+ PT + K++ILGGGPNRIGQGIEFDYCC H + +L+  G+ETIM+N 
Sbjct: 542  AYLYSTYEDECEALPTNRDKIMILGGGPNRIGQGIEFDYCCVHAALALRDDGFETIMVNC 601

Query: 686  NPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEH 745
            NPETVSTDYDTSDRLYFEPLT+EDVL +++LE+P+G+IVQ+GGQTPLKL+          
Sbjct: 602  NPETVSTDYDTSDRLYFEPLTLEDVLEIVELEKPKGVIVQYGGQTPLKLA---------- 651

Query: 746  RLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEI 805
            R   A+G   V + GTSPDSID AEDRERF  ++ +L ++QP   IA++  +AL +A+EI
Sbjct: 652  RALEANG---VPVIGTSPDSIDLAEDRERFQQLVDKLGLKQPPNRIARNAEEALVLAREI 708

Query: 806  GYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALA 865
            GYP+VVRPSYVLGGRAMEIVY +  L  Y+ +AV+V  + PVL+D++L +A+E+DVD +A
Sbjct: 709  GYPLVVRPSYVLGGRAMEIVYGESDLARYVRDAVKVSNDSPVLLDRFLDNAVEVDVDIIA 768

Query: 866  DSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMN 925
            D  GNV+IGG+MEHIE+AGVHSGDS+C +P  ++S      +    + LA+ LNV GLMN
Sbjct: 769  DKDGNVLIGGLMEHIEEAGVHSGDSSCSLPPYSLSPKTQAELRRQVVMLAEGLNVVGLMN 828

Query: 926  CQYAITT--SGD--VYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKE 981
             Q+A+    +GD  V+LLE NPRASRTVPFVSKAIG PLAK AA  M+GK+L + G TKE
Sbjct: 829  TQFAVQVNEAGDDVVFLLEVNPRASRTVPFVSKAIGMPLAKIAARCMAGKTLAEQGATKE 888

Query: 982  VIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLS 1041
            ++P + SVKEA+ PF KFQG D +LGPEMRSTGEVMG+  SF  AFA+AQ A G K P  
Sbjct: 889  IVPGYYSVKEAIFPFAKFQGVDPILGPEMRSTGEVMGVGRSFSAAFARAQEAGGIKAPPV 948

Query: 1042 GTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAG 1101
            G  F+S+ D  K  +  +A+A ++ G+ +V+T GT  +L+  G++ E V K+ EGRPH  
Sbjct: 949  GKAFVSVRDPDKQRVLPVAQALVERGYTLVATRGTGAWLQQNGLSCEIVNKVAEGRPHIV 1008

Query: 1102 DMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALA 1149
            D + NG+I  +V T+ G +    D   +RR  L ++V   TTV+GA A
Sbjct: 1009 DSIKNGEIVYIVNTTEGRAAIS-DSFSIRREALQHRVTYSTTVAGAKA 1055



 Score =  249 bits (636), Expect = 7e-63,   Method: Compositional matrix adjust.
 Identities = 156/432 (36%), Positives = 237/432 (54%), Gaps = 24/432 (5%)

Query: 60  RVRASSAKIDS-SAELSNGAA----SSKDQKLGKRTDLRKILILGAGPIVIGQACEFDYS 114
           +VR    ++DS +AE S   A    + +D+     T+  KI+ILG GP  IGQ  EFDY 
Sbjct: 522 KVRPVYKRVDSCAAEFSTSTAYLYSTYEDECEALPTNRDKIMILGGGPNRIGQGIEFDYC 581

Query: 115 GTQACKALKEEGYEVILINSNPATIMTDPGLADRTYITPMTPELVEQVLEKERPDALLPT 174
              A  AL+++G+E I++N NP T+ TD   +DR Y  P+T E V +++E E+P  ++  
Sbjct: 582 CVHAALALRDDGFETIMVNCNPETVSTDYDTSDRLYFEPLTLEDVLEIVELEKPKGVIVQ 641

Query: 175 MGGQTALNLAVALAESGALEKYGVELIGAKLDAIKKAEDRDLFKQAMKTIGVKTPPSGIG 234
            GGQT L LA       ALE  GV +IG   D+I  AEDR+ F+Q +  +G+K PP+ I 
Sbjct: 642 YGGQTPLKLA------RALEANGVPVIGTSPDSIDLAEDRERFQQLVDKLGLKQPPNRIA 695

Query: 235 NTLDECISIANEIGEFPLIIRPAFTLGGTGGGIAYNKEEFEAICKAGLAASLTSQVLVEK 294
              +E + +A EIG +PL++RP++ LGG    I Y + +     +  +  S  S VL+++
Sbjct: 696 RNAEEALVLAREIG-YPLVVRPSYVLGGRAMEIVYGESDLARYVRDAVKVSNDSPVLLDR 754

Query: 295 SLLGWKEYELEVMRDLADNVVIICSIENVDPMGVHTGDSITVAPAQTLTDKEYQRLRDYS 354
            L    E +++++ D   NV+I   +E+++  GVH+GDS    P  +L+ K    LR   
Sbjct: 755 FLDNAVEVDVDIIADKDGNVLIGGLMEHIEEAGVHSGDSSCSLPPYSLSPKTQAELRRQV 814

Query: 355 IAIIREIGVECGGSNVQFAVN---PVDGEVMVIEMNPRVSRSSALASKATGFPIAKMAAK 411
           + +   + V  G  N QFAV      D  V ++E+NPR SR+    SKA G P+AK+AA+
Sbjct: 815 VMLAEGLNV-VGLMNTQFAVQVNEAGDDVVFLLEVNPRASRTVPFVSKAIGMPLAKIAAR 873

Query: 412 LSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRFAFEKFPGSEPLLTTQMKSVGEAMA 471
              G +L         +  A+ E    Y   K   F F KF G +P+L  +M+S GE M 
Sbjct: 874 CMAGKTL--------AEQGATKEIVPGYYSVKEAIFPFAKFQGVDPILGPEMRSTGEVMG 925

Query: 472 LGRTFQESFQKA 483
           +GR+F  +F +A
Sbjct: 926 VGRSFSAAFARA 937


>gi|380512654|ref|ZP_09856061.1| carbamoyl phosphate synthase large subunit [Xanthomonas sacchari
            NCPPB 4393]
          Length = 1080

 Score = 1264 bits (3270), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 628/1068 (58%), Positives = 800/1068 (74%), Gaps = 21/1068 (1%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTDL+ ILI+GAGPIVIGQACEFDYSG QACKAL++EGY V+L+NSNPATIMTDP +AD
Sbjct: 3    KRTDLQTILIIGAGPIVIGQACEFDYSGAQACKALRDEGYRVVLVNSNPATIMTDPNMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
              YI P+  + VE+++ KE+PDALLPTMGGQTALN A+ LA+ G LEKYGVELIGAK +A
Sbjct: 63   AVYIEPINWQTVEKIIAKEKPDALLPTMGGQTALNCALDLADHGVLEKYGVELIGAKREA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I+ AEDR+LF+ AM  IG++ P + + +TL+E + I   +G +P IIRP+FTLGG+GGGI
Sbjct: 123  IRMAEDRELFRVAMGEIGLECPKAAVAHTLEEALEIQATVG-YPTIIRPSFTLGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EE   I   GL  S TS+VLVE+S+LGWKE+E+EV+RD ADN +I+CSIEN+DPMG
Sbjct: 182  AYNREELIEIVGRGLELSPTSEVLVEESVLGWKEFEMEVVRDTADNCIIVCSIENLDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQRLRD SIA++R+IGV+ GGSNVQF +N   G V+VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQRLRDASIAVLRKIGVDTGGSNVQFGINAQTGRVVVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKK-TPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ N+IT   TPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGYTLDELKNEITGGLTPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVK-ELDWD 505
            FAFEKFP ++  LTTQMKSVGE MA+GRTF ES QKALR LE G  G   + +    + D
Sbjct: 362  FAFEKFPQADARLTTQMKSVGEVMAMGRTFSESLQKALRGLETGKIGLDPTGLDLSSEDD 421

Query: 506  WEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQS 565
               LK  L+ P P+R+  +  A + GM V+++H LSFID WFL Q ++LI  E  L    
Sbjct: 422  LATLKRELKAPGPERLFYVADAFRAGMSVEQVHALSFIDPWFLDQMEDLIAQEVQLAADG 481

Query: 566  VSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANT 625
            +  +       +KR GFSD ++A    + E  VR  R +  V P YKRVD+CAAEF  +T
Sbjct: 482  LGALDAKRLRTLKRAGFSDARLAELCGTNEAAVRALRRAHKVRPVYKRVDSCAAEFATST 541

Query: 626  PYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNS 685
             Y+YS+Y+ ECE+AP+ + K++ILGGGPNRIGQGIEFDYCC H + +L+  GYETIM+N 
Sbjct: 542  AYLYSTYEDECEAAPSDRDKIMILGGGPNRIGQGIEFDYCCVHAALALREDGYETIMVNC 601

Query: 686  NPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEH 745
            NPETVSTDYDTSDRLYFEPLT+EDVL +++LE+P+G+IVQ+GGQTPLKL+          
Sbjct: 602  NPETVSTDYDTSDRLYFEPLTLEDVLEIVELEQPKGVIVQYGGQTPLKLA---------- 651

Query: 746  RLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEI 805
            R   A+G   V + GTSPDSID AEDRERF  ++ +L ++QP   IA++  +AL +A+EI
Sbjct: 652  RALEANG---VPVIGTSPDSIDLAEDRERFQQLVDKLGLKQPPNRIARNAEEALVLAREI 708

Query: 806  GYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALA 865
            GYP+VVRPSYVLGGRAMEIVY +  L  Y+ +AV+V  + PVL+D++L +A+E+DVD +A
Sbjct: 709  GYPLVVRPSYVLGGRAMEIVYGESDLARYVRDAVKVSNDSPVLLDRFLDNAVEVDVDIIA 768

Query: 866  DSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMN 925
            D  G V+IGG+MEHIE+AGVHSGDS+C +P  ++S +    +    ++LAK LNV GLMN
Sbjct: 769  DHSGQVLIGGVMEHIEEAGVHSGDSSCSLPPYSLSPATQTELRRQVVELAKALNVVGLMN 828

Query: 926  CQYAITT--SGD--VYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKE 981
             Q+A+    +GD  VYLLE NPRASRTVPFVSKAIG PLAK AA  M+GK+L + G  KE
Sbjct: 829  TQFAVQVNDAGDDIVYLLEVNPRASRTVPFVSKAIGVPLAKIAARCMAGKTLAEQGALKE 888

Query: 982  VIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLS 1041
            ++P + SVKEA+ PF KFQG D +LGPEMRSTGEVMG+  SF  AFA+AQ A G K P  
Sbjct: 889  IVPDYYSVKEAIFPFAKFQGVDPILGPEMRSTGEVMGVGRSFGAAFARAQEAGGIKAPPL 948

Query: 1042 GTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAG 1101
            G  F+S+ D  K  +  +A+A ++ G+ +V+T GT  +L+  G+  E+V K+ EGRPH  
Sbjct: 949  GKAFVSVRDPDKQRVLPVAQALVERGYTLVATRGTCAWLQQHGLQCEQVNKVAEGRPHIV 1008

Query: 1102 DMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALA 1149
            D++ NG+I  +V T+ G +    D   +RR  L ++V   TTV+GA A
Sbjct: 1009 DLIKNGEIVYIVNTTEGRAAIS-DSFSIRREALQHRVTYSTTVAGARA 1055


>gi|169632633|ref|YP_001706369.1| carbamoyl-phosphate synthase large subunit [Acinetobacter baumannii
            SDF]
 gi|169151425|emb|CAP00159.1| carbamoyl-phosphate synthase, large subunit [Acinetobacter baumannii]
          Length = 1076

 Score = 1263 bits (3269), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 626/1080 (57%), Positives = 799/1080 (73%), Gaps = 36/1080 (3%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILI+GAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIKSILIIGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPSMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+T + V Q++EKERPDA+LPTMGGQTALN A+AL E+G LEKYGVELIGA  +A
Sbjct: 63   ATYIEPITWQTVAQIIEKERPDAVLPTMGGQTALNCALALDENGVLEKYGVELIGATKEA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I+KAEDR LF +AM+ IG++ P + I  T++E + I +  G FP+IIRP+FT+GG+GGGI
Sbjct: 123  IEKAEDRKLFDEAMRKIGLECPKAAIAETMEEALEIQSRFG-FPVIIRPSFTMGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEF  IC+ G   S T Q+L+++SL+GWKEYE+EV+RD  DN +I+C+IEN DPMG
Sbjct: 182  AYNREEFLEICERGFDLSPTHQLLIDESLIGWKEYEMEVVRDKNDNCIIVCAIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGVE GGSNVQF +NP DG ++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQLMRNASVAVLREIGVETGGSNVQFGINPKDGRMVVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKK-TPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT   TPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKIAAKLAVGYTLDELKNDITGGVTPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGW------GCSNVK 500
            F FEKFP +EP+LTTQMKSVGE MA+GR FQES QKALR LE G SG+      G +NVK
Sbjct: 362  FNFEKFPQAEPVLTTQMKSVGEVMAIGRNFQESVQKALRGLEVGVSGFDEKIEAGATNVK 421

Query: 501  ELDWDWEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQF 560
                  E +   L+VP P+R+  +  A + G  +D++ E + ID+WFL Q +++++ E  
Sbjct: 422  ------ETILKELKVPGPERIWYVADAFRHGFSLDDVFEATKIDRWFLIQIQDIVNTEAQ 475

Query: 561  LLTQSVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAE 620
            + T    ++T ++    KR+G SD +IA     ++K+ R++R +LGV P YKRVDTCAAE
Sbjct: 476  VKTLGFGDLTAENIRSFKRKGLSDLRIANLMGISQKQFRKQRWNLGVYPVYKRVDTCAAE 535

Query: 621  FEANTPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYET 680
            FE+ T YMYS+YD ECE+ P+ + K++++GGGPNRIGQGIEFDYCC H + +++  GYET
Sbjct: 536  FESGTAYMYSTYDEECEANPSNRDKIMVIGGGPNRIGQGIEFDYCCVHAALAMREDGYET 595

Query: 681  IMMNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQ 740
            IM+N NPETVSTDYD SDRLYFEP+T+EDVL ++  E+P+G+IVQ+GGQTPLKL+    +
Sbjct: 596  IMVNCNPETVSTDYDISDRLYFEPVTLEDVLEIVRTEKPKGVIVQYGGQTPLKLA----R 651

Query: 741  YLDEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALA 800
             L+E   P         I GTSPD+ID AEDRERF  +I+ L + QP   I KS  + ++
Sbjct: 652  ALEEAGTP---------IIGTSPDAIDRAEDRERFQQMIQRLQLRQPNNSIVKSAEEGIS 702

Query: 801  IAKEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEID 860
             A ++GYP+VVRPSYVLGGRAMEIVY ++ L  YL  AV+   E PVL+D +L DA E+D
Sbjct: 703  EAAKVGYPLVVRPSYVLGGRAMEIVYNEDELKRYLREAVQASNEAPVLLDHFLDDATEVD 762

Query: 861  VDALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNV 920
            VD ++D   +VVIGGIM+HIEQAG+HSGDSAC IP  ++S    + +   TI +AK L V
Sbjct: 763  VDCVSDG-KDVVIGGIMQHIEQAGIHSGDSACSIPPYSLSKEIQNEMRRQTIAMAKELGV 821

Query: 921  CGLMNCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTK 980
             GLMN Q+A+    D+Y+LE NPRASRTVPFVSK IG  LAK AA  M+G+SL   GFTK
Sbjct: 822  VGLMNVQFAV-KGNDIYVLEVNPRASRTVPFVSKCIGESLAKVAARCMAGQSLESQGFTK 880

Query: 981  EVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQK--- 1037
            E+IP   +VKEAV PF KF G D +LGPEM+STGEVMG+  +F  AF KA + +  +   
Sbjct: 881  EIIPNRFAVKEAVFPFAKFPGVDPMLGPEMKSTGEVMGVGQTFGEAFYKAVLGSNDRLPG 940

Query: 1038 LPLSGTV---FLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMH 1094
            LP  G V   FLS+ +  K ++  IAK  ++ GFK+V+T GT   L+  G+  E V K+ 
Sbjct: 941  LPTEGEVKHAFLSVRESDKKYIADIAKKLVEYGFKLVATGGTYQVLKEAGLECESVNKVT 1000

Query: 1095 EGRPHAGDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAI 1154
            EGRPH  D + NG+I ++V T+ G    Q D   +RR  L  KV   TT++GA A  +A 
Sbjct: 1001 EGRPHIVDRLKNGEIHLIVNTTEGKQA-QYDSAMIRRAALQGKVYYTTTINGAEAVCQAF 1059


>gi|333984956|ref|YP_004514166.1| carbamoyl-phosphate synthase large subunit [Methylomonas methanica
            MC09]
 gi|333808997|gb|AEG01667.1| carbamoyl-phosphate synthase, large subunit [Methylomonas methanica
            MC09]
          Length = 1073

 Score = 1263 bits (3269), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 631/1088 (57%), Positives = 805/1088 (73%), Gaps = 28/1088 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ IL+LGAGPIVIGQACEFDYSGTQACKAL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIKSILLLGAGPIVIGQACEFDYSGTQACKALREEGYRVILVNSNPATIMTDPDMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
              YI P+  + VE+++EKERPDA+LPTMGGQTALN A+AL + G LEKYGVE+IGA  +A
Sbjct: 63   AIYIEPIDWQTVEKIIEKERPDAVLPTMGGQTALNCALALDKHGVLEKYGVEMIGASKEA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I  AEDRDLF QAM+ IG++   + + ++++E  +   E+G +P +IRP+FT+GG+GGGI
Sbjct: 123  INMAEDRDLFNQAMRRIGLEVSKAKVAHSMEEAFAAQEEVG-YPTVIRPSFTMGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEF  IC+ GL  S TS++L+E+S+LGWKE+E+EV+RD  DN +IICSIEN DPMG
Sbjct: 182  AYNREEFIEICERGLYLSPTSELLIEESILGWKEFEMEVVRDSKDNCIIICSIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ LR+ S+A++REIGV+ GGSNVQFAVNP +G ++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQILRNASLAVLREIGVDTGGSNVQFAVNPDNGRLIVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITK-KTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ N+IT   TPASFEPSIDYVVTK+PR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGYTLDELRNEITGGTTPASFEPSIDYVVTKVPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWG----CSNVKEL 502
            FAFEKFP +   LTTQMKSVGE MA+GRTFQES QKALR LE G  G       S+    
Sbjct: 362  FAFEKFPQANDRLTTQMKSVGEVMAIGRTFQESLQKALRGLEVGVDGLDEIIDLSDENSE 421

Query: 503  DWDWEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLL 562
            D    +L+Y    P PDR+  +  A + G+  +EIH+   ID WFL Q ++LI  E+ L 
Sbjct: 422  DTILRELRY----PGPDRLWYLADAFRSGLSFEEIHQACKIDPWFLAQVEDLILTEKTLS 477

Query: 563  TQSVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFE 622
            T++++ + K +   +KR+GFSD+++A   ++ E EVR  R   GV P YKR+D+CAAEF 
Sbjct: 478  TKTLATLEKGELLRLKRKGFSDRRLAKLLETKESEVRNIRHKQGVRPVYKRIDSCAAEFA 537

Query: 623  ANTPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIM 682
            ++T Y+YS+Y+ ECE+ P+ ++K++ILGGGPNRIGQGIEFDYCC H + +L+  GYETIM
Sbjct: 538  SDTAYLYSTYEQECEAKPSDREKIIILGGGPNRIGQGIEFDYCCVHAALALREDGYETIM 597

Query: 683  MNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYL 742
            +N NPETVSTD+DTSDRLYFEPLT+EDVL +I+LE+P+G+IVQ+GGQTPLKL+  +    
Sbjct: 598  VNCNPETVSTDFDTSDRLYFEPLTLEDVLEIIELEKPKGVIVQYGGQTPLKLARALE--- 654

Query: 743  DEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIA 802
                      D    I GTSPDSID AEDRERF  +++ LS+ QP    A+S   A+  A
Sbjct: 655  ----------DAGAPIIGTSPDSIDLAEDRERFQKLLERLSLLQPPNATARSVEQAVNSA 704

Query: 803  KEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVD 862
            KE+GYP+VVRPSYVLGGRAMEIV+ +E L  Y++ AV V  + PVL+D++L DA+E+DVD
Sbjct: 705  KELGYPLVVRPSYVLGGRAMEIVFNEEGLRRYMKEAVSVSNDSPVLLDRFLDDAVEMDVD 764

Query: 863  ALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCG 922
            A+ D    V+IGG+MEHIEQAGVHSGDSAC IP   +     D + +   K+A+ L VCG
Sbjct: 765  AIYDG-ETVLIGGLMEHIEQAGVHSGDSACSIPPYDLPIHLQDQLRAQVAKMAEALGVCG 823

Query: 923  LMNCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEV 982
            LMN Q+AI     +Y+LE NPRASRT PFVSKA G+PLAK AA  M GKSL   G T+E 
Sbjct: 824  LMNTQFAIQGE-TIYVLEVNPRASRTAPFVSKATGYPLAKIAARCMVGKSLKQQGITEER 882

Query: 983  IPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSG 1042
            IP++ SVKEAV PF KF G D LLGPEM+STGEVMG+  +F  AFAK+Q A G  L  SG
Sbjct: 883  IPEYFSVKEAVFPFIKFPGVDPLLGPEMKSTGEVMGVGSTFGEAFAKSQRAGGVDLSQSG 942

Query: 1043 TVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGD 1102
             V +S+ D  KP L  +AK  ++  ++IV+T GTA  L+  GI  + + K++EGRP+  D
Sbjct: 943  KVLISIRDADKPKLPDLAKMLIEKNYEIVATRGTARVLKAAGIPCQEIYKVNEGRPNTVD 1002

Query: 1103 MVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTV 1162
            M+ NG+IQ++V T+ G      D   +RR  L  KV   TT++GA A   A+  L + +V
Sbjct: 1003 MIKNGEIQLIVNTTEGVKA-VADSFTMRREALQRKVTYYTTMAGARAACFALGELSAGSV 1061

Query: 1163 TMTALQDF 1170
                LQD 
Sbjct: 1062 --NCLQDL 1067


>gi|152998030|ref|YP_001342865.1| carbamoyl-phosphate synthase large subunit [Marinomonas sp. MWYL1]
 gi|150838954|gb|ABR72930.1| carbamoyl-phosphate synthase, large subunit [Marinomonas sp. MWYL1]
          Length = 1071

 Score = 1263 bits (3269), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 632/1088 (58%), Positives = 803/1088 (73%), Gaps = 28/1088 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ +LILGAGPIVIGQACEFDYSG QACKAL+EEG  VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIKSVLILGAGPIVIGQACEFDYSGAQACKALREEGIRVILVNSNPATIMTDPVMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  + VE+++EKERPDA+LPTMGGQTALN A+ L   G LEKY VE+IGA  DA
Sbjct: 63   ATYIEPVEWKTVEKIIEKERPDAVLPTMGGQTALNCALDLERHGVLEKYNVEMIGATADA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  F +AM+ IG++ P +GI + ++E + +  E+G FP IIRP+FT+GGTGGGI
Sbjct: 123  IDKAEDRSRFDKAMRAIGLECPRAGIAHNMEEALKVQAEVG-FPCIIRPSFTMGGTGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN EEF+ IC  GL  S T+++L+++SL+GWKEYE+EV+RD  DN +I+C+IEN D MG
Sbjct: 182  AYNMEEFDEICTRGLDLSPTNELLIDESLIGWKEYEMEVVRDKKDNCIIVCAIENFDAMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGVE GGSNVQF ++P  G ++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQIMRNASLAVLREIGVETGGSNVQFGMDPKTGRLVVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITK-KTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL++GY+LD++ NDIT  +TPASFEP+IDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKIAAKLAIGYTLDELQNDITGGQTPASFEPAIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDW-- 504
            F FEKFP +   LTTQMKSVGE MA+GRTFQES QKALR LE G  G+      +LD+  
Sbjct: 362  FTFEKFPTANDRLTTQMKSVGEVMAIGRTFQESLQKALRGLEVGSDGFN----PQLDFAE 417

Query: 505  --DWEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLL 562
                E+L Y L+ P  DR+  I  A + GM VDE++E + +D WFL Q ++LI  E  L 
Sbjct: 418  ENSKEKLAYELQSPGSDRIWYIGDAFRSGMTVDEVYEATGVDHWFLVQIEDLIKEEAALA 477

Query: 563  TQSVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFE 622
             + + +MT D    +KR+GFSD ++A     TEK +RE+R  + V P YKRVDTCAAEF 
Sbjct: 478  DKGLIDMTYDVIRRLKRKGFSDARLASLLSVTEKSMRERRYLMNVHPVYKRVDTCAAEFA 537

Query: 623  ANTPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIM 682
             NT YMYS+Y+ ECE+APT ++K++ILGGGPNRIGQGIEFDYCC H +  L+  GYETIM
Sbjct: 538  TNTAYMYSTYEDECEAAPTDREKIIILGGGPNRIGQGIEFDYCCVHAALGLREDGYETIM 597

Query: 683  MNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYL 742
            +N NPETVSTDYDTSDRLYFEP+T+EDVL ++  E+P+G+IVQFGGQTPLK++    + L
Sbjct: 598  VNCNPETVSTDYDTSDRLYFEPVTLEDVLEIVRKEKPKGVIVQFGGQTPLKIA----RAL 653

Query: 743  DEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIA 802
                +P         I GT+P+SID AEDRERF ++I+ L  +QP     +S   A A A
Sbjct: 654  QNEGVP---------IIGTTPESIDRAEDRERFQSMIQRLGYKQPHNATVRSVDQAAAKA 704

Query: 803  KEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVD 862
              IGYP+VVRPSYVLGGRAMEIVY ++ L+ Y+ +AV+V  + PVL+D +L+ AIEID+D
Sbjct: 705  ALIGYPLVVRPSYVLGGRAMEIVYNEKELMRYMTSAVKVSNDSPVLLDHFLNAAIEIDID 764

Query: 863  ALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCG 922
             ++D    VVIGGIM+HIEQAGVHSGDSAC +P  ++S    D I      +A  L V G
Sbjct: 765  CISDG-HQVVIGGIMQHIEQAGVHSGDSACSLPPYSLSKEVQDDIREMIKNMALELGVVG 823

Query: 923  LMNCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEV 982
            LMN Q AI   G++Y++E NPRASRTVPFVSK IG  LA+ AAL+M+GK+L +LGFTKE+
Sbjct: 824  LMNTQLAI-QDGEIYVIEVNPRASRTVPFVSKCIGRSLAQVAALIMAGKTLEELGFTKEI 882

Query: 983  IPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSG 1042
            IP + SVKEAV PF KFQG D +LGPEM+STGEVMG+  +F  AF KA +  G +LP SG
Sbjct: 883  IPSYYSVKEAVFPFNKFQGVDPILGPEMKSTGEVMGVGDTFAEAFGKAVLGGGTELPTSG 942

Query: 1043 TVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGD 1102
              F+S+ D+ K     +A+   ++GF +V T GTA +L  +G+ V +V K++EGRPH  D
Sbjct: 943  RAFISVRDMDKEGAVEVARRLAELGFDLVGTEGTAKYLTERGVEVRKVNKVNEGRPHIVD 1002

Query: 1103 MVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTV 1162
            M+ NG+I  ++ T+SG +    D   +RR  L  KV   TT++GA A + AI SL   T 
Sbjct: 1003 MMKNGEIDYIINTTSG-TQAIADSSVIRRTALQRKVCYTTTLAGAEATSMAI-SLTGET- 1059

Query: 1163 TMTALQDF 1170
             +  LQD 
Sbjct: 1060 KVRRLQDL 1067


>gi|15599950|ref|NP_253444.1| carbamoyl phosphate synthase large subunit [Pseudomonas aeruginosa
            PAO1]
 gi|116052903|ref|YP_793220.1| carbamoyl phosphate synthase large subunit [Pseudomonas aeruginosa
            UCBPP-PA14]
 gi|296391583|ref|ZP_06881058.1| carbamoyl phosphate synthase large subunit [Pseudomonas aeruginosa
            PAb1]
 gi|313109737|ref|ZP_07795677.1| carbamoylphosphate synthetase large subunit [Pseudomonas aeruginosa
            39016]
 gi|355642737|ref|ZP_09052871.1| carbamoyl-phosphate synthase large subunit [Pseudomonas sp. 2_1_26]
 gi|386060924|ref|YP_005977446.1| carbamoyl phosphate synthase large subunit [Pseudomonas aeruginosa
            M18]
 gi|386063746|ref|YP_005979050.1| carbamoyl phosphate synthase large subunit [Pseudomonas aeruginosa
            NCGM2.S1]
 gi|392986428|ref|YP_006485015.1| carbamoyl phosphate synthase large subunit [Pseudomonas aeruginosa
            DK2]
 gi|416856859|ref|ZP_11912377.1| carbamoyl phosphate synthase large subunit [Pseudomonas aeruginosa
            138244]
 gi|416873718|ref|ZP_11917693.1| carbamoyl phosphate synthase large subunit [Pseudomonas aeruginosa
            152504]
 gi|418586246|ref|ZP_13150290.1| carbamoyl phosphate synthase large subunit [Pseudomonas aeruginosa
            MPAO1/P1]
 gi|418592936|ref|ZP_13156796.1| carbamoyl phosphate synthase large subunit [Pseudomonas aeruginosa
            MPAO1/P2]
 gi|419751530|ref|ZP_14277941.1| carbamoyl phosphate synthase large subunit [Pseudomonas aeruginosa
            PADK2_CF510]
 gi|420141950|ref|ZP_14649584.1| carbamoyl phosphate synthase large subunit [Pseudomonas aeruginosa
            CIG1]
 gi|421156276|ref|ZP_15615725.1| carbamoyl phosphate synthase large subunit [Pseudomonas aeruginosa
            ATCC 14886]
 gi|421163340|ref|ZP_15622061.1| carbamoyl phosphate synthase large subunit [Pseudomonas aeruginosa
            ATCC 25324]
 gi|421170543|ref|ZP_15628486.1| carbamoyl phosphate synthase large subunit [Pseudomonas aeruginosa
            ATCC 700888]
 gi|421177011|ref|ZP_15634668.1| carbamoyl phosphate synthase large subunit [Pseudomonas aeruginosa
            CI27]
 gi|421182830|ref|ZP_15640300.1| carbamoyl phosphate synthase large subunit [Pseudomonas aeruginosa
            E2]
 gi|421519317|ref|ZP_15965988.1| carbamoyl phosphate synthase large subunit [Pseudomonas aeruginosa
            PAO579]
 gi|424944457|ref|ZP_18360220.1| carbamoylphosphate synthetase large subunit [Pseudomonas aeruginosa
            NCMG1179]
 gi|451988352|ref|ZP_21936486.1| Carbamoyl-phosphate synthase large chain [Pseudomonas aeruginosa 18A]
 gi|12644249|sp|P38100.3|CARB_PSEAE RecName: Full=Carbamoyl-phosphate synthase large chain; AltName:
            Full=Carbamoyl-phosphate synthetase ammonia chain
 gi|9951019|gb|AAG08142.1|AE004889_5 carbamoylphosphate synthetase large subunit [Pseudomonas aeruginosa
            PAO1]
 gi|1750387|gb|AAB39252.1| carbamoylphosphate synthetase large subunit [Pseudomonas aeruginosa
            PAO1]
 gi|115588124|gb|ABJ14139.1| carbamoylphosphate synthetase large subunit [Pseudomonas aeruginosa
            UCBPP-PA14]
 gi|310882179|gb|EFQ40773.1| carbamoylphosphate synthetase large subunit [Pseudomonas aeruginosa
            39016]
 gi|334841280|gb|EGM19913.1| carbamoyl phosphate synthase large subunit [Pseudomonas aeruginosa
            138244]
 gi|334844408|gb|EGM22983.1| carbamoyl phosphate synthase large subunit [Pseudomonas aeruginosa
            152504]
 gi|346060903|dbj|GAA20786.1| carbamoylphosphate synthetase large subunit [Pseudomonas aeruginosa
            NCMG1179]
 gi|347307230|gb|AEO77344.1| carbamoyl phosphate synthase large subunit [Pseudomonas aeruginosa
            M18]
 gi|348032305|dbj|BAK87665.1| carbamoyl phosphate synthase large subunit [Pseudomonas aeruginosa
            NCGM2.S1]
 gi|354830175|gb|EHF14230.1| carbamoyl-phosphate synthase large subunit [Pseudomonas sp. 2_1_26]
 gi|375043386|gb|EHS36012.1| carbamoyl phosphate synthase large subunit [Pseudomonas aeruginosa
            MPAO1/P1]
 gi|375048285|gb|EHS40812.1| carbamoyl phosphate synthase large subunit [Pseudomonas aeruginosa
            MPAO1/P2]
 gi|384401992|gb|EIE48344.1| carbamoyl phosphate synthase large subunit [Pseudomonas aeruginosa
            PADK2_CF510]
 gi|392321933|gb|AFM67313.1| carbamoyl phosphate synthase large subunit [Pseudomonas aeruginosa
            DK2]
 gi|403245257|gb|EJY59079.1| carbamoyl phosphate synthase large subunit [Pseudomonas aeruginosa
            CIG1]
 gi|404345236|gb|EJZ71588.1| carbamoyl phosphate synthase large subunit [Pseudomonas aeruginosa
            PAO579]
 gi|404519151|gb|EKA29925.1| carbamoyl phosphate synthase large subunit [Pseudomonas aeruginosa
            ATCC 14886]
 gi|404523056|gb|EKA33504.1| carbamoyl phosphate synthase large subunit [Pseudomonas aeruginosa
            ATCC 700888]
 gi|404529151|gb|EKA39202.1| carbamoyl phosphate synthase large subunit [Pseudomonas aeruginosa
            ATCC 25324]
 gi|404530099|gb|EKA40112.1| carbamoyl phosphate synthase large subunit [Pseudomonas aeruginosa
            CI27]
 gi|404541272|gb|EKA50637.1| carbamoyl phosphate synthase large subunit [Pseudomonas aeruginosa
            E2]
 gi|451754005|emb|CCQ89009.1| Carbamoyl-phosphate synthase large chain [Pseudomonas aeruginosa 18A]
 gi|453043949|gb|EME91676.1| carbamoyl phosphate synthase large subunit [Pseudomonas aeruginosa
            PA21_ST175]
          Length = 1073

 Score = 1263 bits (3268), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 627/1088 (57%), Positives = 808/1088 (74%), Gaps = 28/1088 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILILGAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPAMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+    V +++EKERPDALLPTMGGQTALN A+ L   G LEK+GVE+IGA  D 
Sbjct: 63   ATYIEPIKWATVAKIIEKERPDALLPTMGGQTALNCALDLERHGVLEKFGVEMIGANADT 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  F +AMK IG+  P SGI ++++E   +  ++G FP IIRP+FT+GGTGGGI
Sbjct: 123  IDKAEDRSRFDKAMKDIGLACPRSGIAHSMEEAYGVLEQVG-FPCIIRPSFTMGGTGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEFE IC  GL  S T+++L+++SL+GWKEYE+EV+RD  DN +I+CSIEN DPMG
Sbjct: 182  AYNREEFEEICARGLDLSPTNELLIDESLIGWKEYEMEVVRDKKDNCIIVCSIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGVE GGSNVQF + P  G ++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQIMRNASLAVLREIGVETGGSNVQFGICPNTGRMVVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT  +TPASFEP+IDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKIAAKLAVGYTLDELQNDITGGRTPASFEPAIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            FAFEKFP ++  LTTQMKSVGE MA+GRTFQES QKALR LE G +G+      +LD + 
Sbjct: 362  FAFEKFPKADARLTTQMKSVGEVMAIGRTFQESVQKALRGLEVGATGFD----PKLDLND 417

Query: 507  EQ----LKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLL 562
             +    LK  L VP+ +R+  +  A + G  V+E+ EL+ ID+WFL Q ++L+  E+ + 
Sbjct: 418  PEADSILKRELTVPSAERVWYVADAFRAGKSVEEVFELTRIDEWFLVQIEDLVKDEEKVK 477

Query: 563  TQSVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFE 622
            T  +S++ ++  Y++KR+GFSD ++A     TEK +R  R  L V+P YKRVDTCAAEF 
Sbjct: 478  TLGLSSIDRELMYKLKRKGFSDARLAKLLGVTEKNLRSHRHKLKVLPVYKRVDTCAAEFA 537

Query: 623  ANTPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIM 682
             +T YMYS+Y+ ECE+ P+ ++K++ILGGGPNRIGQGIEFDYCC H + +++  GYETIM
Sbjct: 538  TDTAYMYSTYEEECEANPSSREKIMILGGGPNRIGQGIEFDYCCVHAALAMREDGYETIM 597

Query: 683  MNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYL 742
            +N NPETVSTDYDTSDRLYFEP+T+EDVL ++ +E+P+G+IVQ+GGQTPLKL     + L
Sbjct: 598  VNCNPETVSTDYDTSDRLYFEPVTLEDVLEIVRVEQPKGVIVQYGGQTPLKLC----RAL 653

Query: 743  DEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIA 802
            +E  +P         I GTSPD+ID AEDRERF  +++ L++ QP    A+SE +ALA +
Sbjct: 654  EEAGVP---------IIGTSPDAIDRAEDRERFQQMVQRLNLRQPANATARSEDEALAAS 704

Query: 803  KEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVD 862
            K IGYP+VVRPSYVLGGRAMEIVY +E L  Y+  AV+V  + PVL+D +L+ AIE+D+D
Sbjct: 705  KAIGYPLVVRPSYVLGGRAMEIVYQEEELKRYMREAVQVSNDSPVLLDHFLNCAIEVDID 764

Query: 863  ALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCG 922
            A+ D    VVIG IM+HIEQAGVHSGDSAC +P  ++     D I     K+A  L V G
Sbjct: 765  AVCDG-EIVVIGAIMQHIEQAGVHSGDSACSLPPYSLPQHIQDEIREQVKKMALELGVVG 823

Query: 923  LMNCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEV 982
            LMN Q A+    D++++E NPRASRTVPFVSK +G  LAK AA VM+GK+L ++GFT+E+
Sbjct: 824  LMNVQMAVQGE-DIFVIEVNPRASRTVPFVSKCVGESLAKVAARVMAGKTLAEVGFTQEI 882

Query: 983  IPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSG 1042
            IP   SVKEAV PF KF G D +LGPEM+STGEVMG+  SF  AFAKAQ+ A + LP +G
Sbjct: 883  IPPFFSVKEAVFPFAKFPGVDPILGPEMKSTGEVMGVGDSFAEAFAKAQLGASEILPTAG 942

Query: 1043 TVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGD 1102
              F+S+ +  KP   ++A   + +GF++V+T+GTA  +E  G+ V RV K+ EGRPH  D
Sbjct: 943  CAFISVREDDKPFAAQVAGDLVALGFEVVATAGTARVIEAAGLPVRRVNKVTEGRPHVVD 1002

Query: 1103 MVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTV 1162
            M+ N ++ +++ T+ G      D   +RR  L +K+   TT++G  A  EA++     TV
Sbjct: 1003 MIKNDEVTLIINTTEGRQ-SIADSYSIRRNALQHKICCTTTIAGGQAICEALKFGPEKTV 1061

Query: 1163 TMTALQDF 1170
                LQD 
Sbjct: 1062 RR--LQDL 1067


>gi|395761981|ref|ZP_10442650.1| carbamoyl-phosphate synthase large subunit [Janthinobacterium lividum
            PAMC 25724]
          Length = 1076

 Score = 1263 bits (3268), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 635/1078 (58%), Positives = 808/1078 (74%), Gaps = 28/1078 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KR D++ ILI+GAGPIVIGQACEFDYSG QACKAL+EEGY+VIL+NSNPATIMTDP +AD
Sbjct: 3    KRLDIKSILIIGAGPIVIGQACEFDYSGAQACKALREEGYKVILVNSNPATIMTDPEMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+T  +VE+++ KERPDA+LPTMGGQTALN A+ L  +G L KY VELIGA  +A
Sbjct: 63   VTYIEPITWSVVERIIAKERPDAILPTMGGQTALNCALDLFNNGVLAKYNVELIGASPEA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  FK AM  IG+ +  SG+ ++++E  ++   +G FP IIRP+FT+GG+GGGI
Sbjct: 123  IDKAEDRSKFKDAMTKIGLGSARSGVAHSMEEAWAVQRTLG-FPTIIRPSFTMGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEFE ICK GL AS T ++L+E+SLLGWKEYE+EV+RD ADN +IICSIEN+DPMG
Sbjct: 182  AYNEEEFETICKRGLEASPTKELLIEESLLGWKEYEMEVVRDKADNCIIICSIENLDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGV+ GGSNVQF++NPVDG ++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQIMRNASLAVLREIGVDTGGSNVQFSINPVDGRMIVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITK-KTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VG++LD++ N+IT   TPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKIAAKLAVGFTLDELRNEITGGATPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            F FEKFP ++  LTTQMKSVGE MA+GRTFQESFQKALR LE G  G     + E   D 
Sbjct: 362  FTFEKFPTADHHLTTQMKSVGEVMAIGRTFQESFQKALRGLEVGVDG-----MNEKTKDR 416

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
            E+++  L  P P+R+  +  A  +G  ++E+H L+ ID WFL Q KE++D+E +L TQ +
Sbjct: 417  EKIEEELGEPGPERIWYVGDAFAQGFTLEEVHNLTKIDPWFLIQIKEIVDLELWLDTQKL 476

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
              + K+  Y++K++GFSD+++ F  ++T+  VR++R +LG+ P YKRVDTCAAEF  +T 
Sbjct: 477  DKLDKNTLYKLKQKGFSDRRLGFLLQTTDTAVRQQRHALGIRPVYKRVDTCAAEFSTDTA 536

Query: 627  YMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSN 686
            YMYS+YD ECES P+ KKK+++LGGGPNRIGQGIEFDYCC H + +++  GYETIM+N N
Sbjct: 537  YMYSTYDEECESKPSDKKKIMVLGGGPNRIGQGIEFDYCCVHAALAMREDGYETIMVNCN 596

Query: 687  PETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHR 746
            PETVSTDYDTSDRLYFE LT+EDVL ++ +E+P G+IVQ+GGQTPLKL+L +        
Sbjct: 597  PETVSTDYDTSDRLYFESLTLEDVLEIVAIEKPVGVIVQYGGQTPLKLALDLE------- 649

Query: 747  LPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEIG 806
               A+G   V I GTSPD IDAAEDRERF  ++ +L + QP    A++EADALA+A+EIG
Sbjct: 650  ---ANG---VPIIGTSPDMIDAAEDRERFQQLLHKLELRQPPNRTARTEADALALAQEIG 703

Query: 807  YPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALAD 866
            YP+VVRPSYVLGGRAMEIV+    L  Y+  AV+V  + PVL+D++L+DAIE DVD ++D
Sbjct: 704  YPLVVRPSYVLGGRAMEIVHEQRDLERYMREAVKVSHDSPVLLDRFLNDAIECDVDCISD 763

Query: 867  SCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNC 926
                  IGG+MEHIEQAGVHSGDSAC +P  ++S   +D +   T  +AK LNV GLMN 
Sbjct: 764  G-ETTFIGGVMEHIEQAGVHSGDSACSLPPYSLSQETIDELKRQTALMAKGLNVVGLMNV 822

Query: 927  QYAI-------TTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFT 979
            Q+AI            V++LE NPRASRTVPFVSKA G  LAK AA  M G+SL   G T
Sbjct: 823  QFAIQKQEIDGAMKDVVFVLEVNPRASRTVPFVSKATGLQLAKIAARCMVGQSLASQGIT 882

Query: 980  KEVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLP 1039
            +EV+P + SVKEAV PF KF G D +LGPEM+STGEVMG+ ++F  AF K+Q+ AG  LP
Sbjct: 883  QEVVPPYFSVKEAVFPFVKFPGVDTILGPEMKSTGEVMGVGLTFGEAFVKSQLGAGVNLP 942

Query: 1040 LSGTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPH 1099
             SG VF+S+    KP   ++A+  ++ GF +V+T GTA  +   GIAV  V K+ EGRPH
Sbjct: 943  KSGKVFISVKASDKPRAVQVARDLVESGFTVVATKGTAAVIAAAGIAVTPVNKVIEGRPH 1002

Query: 1100 AGDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSL 1157
              DM+ N +I +++ T        +D   +R   LA +V   TT++GA A  E IR L
Sbjct: 1003 IVDMIKNHEIVLVINTVEEKRSAIVDSRAIRTSALASRVTTYTTIAGAEAAVEGIRHL 1060


>gi|257454666|ref|ZP_05619922.1| carbamoyl-phosphate synthase, large subunit [Enhydrobacter aerosaccus
            SK60]
 gi|257447976|gb|EEV22963.1| carbamoyl-phosphate synthase, large subunit [Enhydrobacter aerosaccus
            SK60]
          Length = 1081

 Score = 1263 bits (3268), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 626/1081 (57%), Positives = 796/1081 (73%), Gaps = 34/1081 (3%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILI+GAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIKSILIIGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPVMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+T + VE++++KERPDA+LPTMGGQTALN A+ L + G LEKYG ELIGA  DA
Sbjct: 63   ATYIEPITWQTVERIIDKERPDAILPTMGGQTALNCALDLDKHGVLEKYGCELIGATKDA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I+KAEDR+LF QAMK IG++ P + +  T+++  +I  ++G FP IIRP+FT+GG+GGGI
Sbjct: 123  IEKAEDRNLFDQAMKKIGLECPRAEVAETMEQAFAIQAKVG-FPCIIRPSFTMGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN++EF  IC+ G   S T Q+L+++SL+GWKEYE+EV+RD  DN +I+CSIEN DPMG
Sbjct: 182  AYNRDEFVEICERGFDLSPTHQLLIDESLIGWKEYEMEVVRDKKDNCIIVCSIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGVE GGSNVQF ++P  G ++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQIMRNASLAVLREIGVETGGSNVQFGIDPKTGRMVVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKK-TPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT   TPASFEP+IDYVVTK+PR
Sbjct: 302  PRVSRSSALASKATGFPIAKIAAKLAVGYTLDELSNDITGGLTPASFEPAIDYVVTKVPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            F FEKFP ++  L+TQMKSVGE MA+GR FQES QKALR LE G +G+     + LD++ 
Sbjct: 362  FNFEKFPQADSTLSTQMKSVGEVMAIGRNFQESMQKALRGLEIGVNGFD----EYLDFNQ 417

Query: 507  EQ------LKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQF 560
            ++      LK  L+ P PDR+  I  A + GM VDE+ E + ID WFL Q ++++  E+ 
Sbjct: 418  DEDTIRSTLKVKLKTPTPDRIFYIADAFRFGMSVDEVFEFTRIDPWFLVQIEDIVKTEKL 477

Query: 561  LLTQSVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAE 620
            +       +T D+  + KR+G SD ++A     ++K++R+KR  LGV P YKRVDTCAAE
Sbjct: 478  VKETGFGGLTSDNLRQFKRKGLSDLRLATLLGISQKQLRKKRWDLGVYPVYKRVDTCAAE 537

Query: 621  FEANTPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYET 680
            F  +T YMYSSYD ECE+ PT  KK++++GGGPNRIGQGIEFDYCC H + +++  GYET
Sbjct: 538  FSTSTAYMYSSYDDECEANPTNNKKIMVIGGGPNRIGQGIEFDYCCVHAALAMREDGYET 597

Query: 681  IMMNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQ 740
            IM+N NPETVSTDYDTSDRLYFEP+T+EDVL ++ +E+PEG+IVQ+GGQTPLKL+     
Sbjct: 598  IMVNCNPETVSTDYDTSDRLYFEPITLEDVLEIVRIEKPEGVIVQYGGQTPLKLA----- 652

Query: 741  YLDEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALA 800
                 R   A+G   V I GTSPD+ID AEDRERF  +I++L   QP   +A S  D + 
Sbjct: 653  -----RALEAAG---VHIIGTSPDAIDRAEDRERFQHMIQQLGFTQPPNALATSTEDGIV 704

Query: 801  IAKEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEID 860
             A ++GYP+VVRPSYVLGGRAMEIVY +  L  YL  AV+   E PVL+D++L DAIE+D
Sbjct: 705  KATQVGYPLVVRPSYVLGGRAMEIVYNENELRRYLREAVQASNEAPVLLDRFLDDAIEVD 764

Query: 861  VDALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNV 920
            VD ++D   NVVIGGIM+HIEQAGVHSGDSAC IP  ++S    D +   T+ +AK L V
Sbjct: 765  VDCISDGT-NVVIGGIMQHIEQAGVHSGDSACSIPPYSLSQEICDVMREQTVAMAKELGV 823

Query: 921  CGLMNCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTK 980
             GLMN QYA+   G VY+LE NPRASRTVPFVSK IG  LA+ AA  M+G +L +  FT 
Sbjct: 824  VGLMNVQYAV-KDGVVYILEVNPRASRTVPFVSKCIGTSLAQVAARCMAGTTLVEQNFTT 882

Query: 981  EVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLP- 1039
            EVIP   +VKEAV PF KF G D +L PEM+STGEVMG+  +F  A+ KA I +  +LP 
Sbjct: 883  EVIPTFFAVKEAVFPFAKFPGVDPILSPEMKSTGEVMGVGQTFGEAYYKAIIGSNDRLPG 942

Query: 1040 -----LSGTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMH 1094
                     VFLS+ +  K +L  +AK F D GFK+V+TSGT   L   GIA ER+ K+ 
Sbjct: 943  LPVENEVKKVFLSVRESDKANLVPVAKQFADYGFKLVATSGTQKILTEAGIACERINKVT 1002

Query: 1095 EGRPHAGDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAI 1154
            EGRPH  D + NG+I ++V T+ G    + D   +RR  L +KV  +TT++ A A  +A 
Sbjct: 1003 EGRPHIVDAIKNGEIAIVVNTTEGKQAHE-DSFSIRRSALQHKVFNVTTLNAAAAVTQAY 1061

Query: 1155 R 1155
            +
Sbjct: 1062 K 1062



 Score =  259 bits (662), Expect = 6e-66,   Method: Compositional matrix adjust.
 Identities = 153/423 (36%), Positives = 245/423 (57%), Gaps = 24/423 (5%)

Query: 67  KIDS-SAELSNGAA----SSKDQKLGKRTDLRKILILGAGPIVIGQACEFDYSGTQACKA 121
           ++D+ +AE S   A    S  D+     T+ +KI+++G GP  IGQ  EFDY    A  A
Sbjct: 530 RVDTCAAEFSTSTAYMYSSYDDECEANPTNNKKIMVIGGGPNRIGQGIEFDYCCVHAALA 589

Query: 122 LKEEGYEVILINSNPATIMTDPGLADRTYITPMTPELVEQVLEKERPDALLPTMGGQTAL 181
           ++E+GYE I++N NP T+ TD   +DR Y  P+T E V +++  E+P+ ++   GGQT L
Sbjct: 590 MREDGYETIMVNCNPETVSTDYDTSDRLYFEPITLEDVLEIVRIEKPEGVIVQYGGQTPL 649

Query: 182 NLAVALAESGALEKYGVELIGAKLDAIKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECI 241
            LA       ALE  GV +IG   DAI +AEDR+ F+  ++ +G   PP+ +  + ++ I
Sbjct: 650 KLA------RALEAAGVHIIGTSPDAIDRAEDRERFQHMIQQLGFTQPPNALATSTEDGI 703

Query: 242 SIANEIGEFPLIIRPAFTLGGTGGGIAYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKE 301
             A ++G +PL++RP++ LGG    I YN+ E     +  + AS  + VL+++ L    E
Sbjct: 704 VKATQVG-YPLVVRPSYVLGGRAMEIVYNENELRRYLREAVQASNEAPVLLDRFLDDAIE 762

Query: 302 YELEVMRDLADNVVIICSIENVDPMGVHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREI 361
            +++ + D   NVVI   +++++  GVH+GDS    P  +L+ +    +R+ ++A+ +E+
Sbjct: 763 VDVDCISD-GTNVVIGGIMQHIEQAGVHSGDSACSIPPYSLSQEICDVMREQTVAMAKEL 821

Query: 362 GVECGGSNVQFAVNPVDGEVMVIEMNPRVSRSSALASKATGFPIAKMAAKLSVGYSLDQI 421
           GV  G  NVQ+AV   DG V ++E+NPR SR+    SK  G  +A++AA+   G +L + 
Sbjct: 822 GV-VGLMNVQYAVK--DGVVYILEVNPRASRTVPFVSKCIGTSLAQVAARCMAGTTLVE- 877

Query: 422 PNDITKKTPASFEPSIDYVVTKIPRFAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQ 481
            N  T+  P  F         K   F F KFPG +P+L+ +MKS GE M +G+TF E++ 
Sbjct: 878 QNFTTEVIPTFF-------AVKEAVFPFAKFPGVDPILSPEMKSTGEVMGVGQTFGEAYY 930

Query: 482 KAL 484
           KA+
Sbjct: 931 KAI 933


>gi|294624590|ref|ZP_06703265.1| carbamoyl-phosphate synthase large subunit [Xanthomonas fuscans
            subsp. aurantifolii str. ICPB 11122]
 gi|292601125|gb|EFF45187.1| carbamoyl-phosphate synthase large subunit [Xanthomonas fuscans
            subsp. aurantifolii str. ICPB 11122]
          Length = 1080

 Score = 1263 bits (3268), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 628/1073 (58%), Positives = 804/1073 (74%), Gaps = 21/1073 (1%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTDL+ ILI+GAGPIVIGQACEFDYSG QACKAL++EGY V+L+NSNPATIMTDP +AD
Sbjct: 3    KRTDLKTILIIGAGPIVIGQACEFDYSGAQACKALRDEGYRVVLVNSNPATIMTDPNMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
              YI P+  + VE+++ KE+PDALLPTMGGQTALN A+ LA+ G LEKY VELIGAK +A
Sbjct: 63   AVYIEPINWQTVEKIIAKEKPDALLPTMGGQTALNCALDLADHGVLEKYNVELIGAKREA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I+ AEDR+LF+ AM  IG+  P + + +TL+E + I   +G +P IIRP+FTLGG+GGGI
Sbjct: 123  IRMAEDRELFRVAMGEIGLDCPTAAVAHTLEEALEIQTRVG-YPTIIRPSFTLGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EE   I   GL  S T++VLVE+S+LGWKE+E+EV+RD ADN +I+C+IEN+DPMG
Sbjct: 182  AYNREELIEIVGRGLELSPTTEVLVEESVLGWKEFEMEVVRDTADNCIIVCAIENLDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQRLRD SIA++R+IGV+ GGSNVQF ++P  G V+VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQRLRDASIAVLRKIGVDTGGSNVQFGISPTTGRVVVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKK-TPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ N+IT   TPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGYTLDELKNEITGGLTPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVK-ELDWD 505
            FAFEKFP ++  LTTQMKSVGE MA+GRTFQES QKALR LE G  G   + +    + D
Sbjct: 362  FAFEKFPQADARLTTQMKSVGEVMAMGRTFQESLQKALRGLETGKIGLDPTGLDLSSEDD 421

Query: 506  WEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQS 565
               LK  L+ P P+R+  +  A + GM V +++ LSFID WFL Q +E+I  EQ L    
Sbjct: 422  IATLKRELKAPGPERLFYVADAFRAGMTVADVYALSFIDPWFLDQIEEIISHEQQLADDG 481

Query: 566  VSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANT 625
            ++ +       +KR GFSD ++A    S E+ VR  R +L + P YKRVD+CAAEF  +T
Sbjct: 482  MAALDAPRLRMLKRAGFSDARMAQLIGSNEESVRTLRRALKLRPVYKRVDSCAAEFGTST 541

Query: 626  PYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNS 685
             Y+YS+Y+ ECE+ PT + K++ILGGGPNRIGQGIEFDYCC H + +L+  G+ETIM+N 
Sbjct: 542  AYLYSTYEDECEALPTDRDKIMILGGGPNRIGQGIEFDYCCVHAALALRDDGFETIMVNC 601

Query: 686  NPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEH 745
            NPETVSTDYDTSDRLYFEPLT+EDVL +++LE+P+G+IVQ+GGQTPLKL+          
Sbjct: 602  NPETVSTDYDTSDRLYFEPLTLEDVLEIVELEKPKGVIVQYGGQTPLKLA---------- 651

Query: 746  RLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEI 805
            R   A+G   V + GTSPDSID AEDRERF  ++ +L ++QP   IA++  +AL +A+EI
Sbjct: 652  RALEANG---VPVIGTSPDSIDLAEDRERFQQLVDKLGLKQPPNRIARNAEEALVLAREI 708

Query: 806  GYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALA 865
            GYP+VVRPSYVLGGRAMEIVY +  L  Y+ +AV+V  + PVL+D++L +A+E+DVD +A
Sbjct: 709  GYPLVVRPSYVLGGRAMEIVYGESDLARYVRDAVKVSNDSPVLLDRFLDNAVEVDVDIIA 768

Query: 866  DSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMN 925
            D  GNV+IGG+MEHIE+AGVHSGDS+C +P  ++S      +    + LA+ LNV GLMN
Sbjct: 769  DKDGNVLIGGVMEHIEEAGVHSGDSSCSLPPYSLSPQTQAELRRQVVMLAEGLNVVGLMN 828

Query: 926  CQYAITT--SGD--VYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKE 981
             Q+A+    +GD  VYLLE NPRASRTVPFVSKAIG PLAK AA  M+GK+L + G TKE
Sbjct: 829  TQFAVQVNEAGDDIVYLLEVNPRASRTVPFVSKAIGMPLAKIAARCMAGKTLAEQGATKE 888

Query: 982  VIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLS 1041
            ++P + SVKEA+ PF KFQG D +LGPEMRSTGEVMG+  SF  AFA+AQ A G K P  
Sbjct: 889  IVPDYYSVKEAIFPFAKFQGVDPILGPEMRSTGEVMGVGRSFSAAFARAQEAGGIKAPPL 948

Query: 1042 GTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAG 1101
            G  F+S+ D  K  +  +A+A ++ GF +V+T GT  +L+  G++ E V K+ EGRPH  
Sbjct: 949  GKAFVSVRDPDKQRVLPVAQALVERGFTLVATRGTGAWLQQNGLSCEIVNKVAEGRPHIV 1008

Query: 1102 DMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAI 1154
            D + NG+I  +V T+ G +    D   +RR  L ++V   TTV+GA A  +++
Sbjct: 1009 DSIKNGEIVYIVNTTEGRAAIS-DSFSIRREALQHRVTYSTTVAGAKALVQSL 1060


>gi|152984968|ref|YP_001350798.1| carbamoyl phosphate synthase large subunit [Pseudomonas aeruginosa
            PA7]
 gi|452876019|ref|ZP_21953387.1| carbamoyl phosphate synthase large subunit [Pseudomonas aeruginosa
            VRFPA01]
 gi|150960126|gb|ABR82151.1| carbamoylphosphate synthetase large subunit [Pseudomonas aeruginosa
            PA7]
 gi|452187142|gb|EME14160.1| carbamoyl phosphate synthase large subunit [Pseudomonas aeruginosa
            VRFPA01]
          Length = 1073

 Score = 1263 bits (3268), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 627/1088 (57%), Positives = 808/1088 (74%), Gaps = 28/1088 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILILGAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPAMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+    V +++EKERPDALLPTMGGQTALN A+ L   G LEK+GVE+IGA  D 
Sbjct: 63   ATYIEPIKWATVAKIIEKERPDALLPTMGGQTALNCALDLERHGVLEKFGVEMIGANADT 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  F +AMK IG+  P SGI ++++E   +  ++G FP IIRP+FT+GGTGGGI
Sbjct: 123  IDKAEDRSRFDRAMKDIGLACPRSGIAHSMEEAYGVLEQVG-FPCIIRPSFTMGGTGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEFE IC  GL  S T+++L+++SL+GWKEYE+EV+RD  DN +I+CSIEN DPMG
Sbjct: 182  AYNREEFEEICARGLDLSPTNELLIDESLIGWKEYEMEVVRDKKDNCIIVCSIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGVE GGSNVQF + P  G ++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQIMRNASLAVLREIGVETGGSNVQFGICPNTGRMVVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT  +TPASFEP+IDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKIAAKLAVGYTLDELQNDITGGRTPASFEPAIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            FAFEKFP ++  LTTQMKSVGE MA+GRTFQES QKALR LE G +G+      +LD + 
Sbjct: 362  FAFEKFPKADARLTTQMKSVGEVMAIGRTFQESVQKALRGLEVGATGFD----PKLDLND 417

Query: 507  EQ----LKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLL 562
             +    LK  L VP+ +R+  +  A + G  V+E+ EL+ ID+WFL Q ++L+  E+ + 
Sbjct: 418  PEAQSILKRELTVPSAERVWYVADAFRAGKSVEEVFELTRIDEWFLVQIEDLVKDEEKVK 477

Query: 563  TQSVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFE 622
            T  +S++ ++  Y++KR+GFSD ++A     TEK +R  R  L V+P YKRVDTCAAEF 
Sbjct: 478  TLGLSSIDRELMYKLKRKGFSDARLAKLLGVTEKNLRSHRHKLKVLPVYKRVDTCAAEFA 537

Query: 623  ANTPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIM 682
             +T YMYS+Y+ ECE+ P+ ++K++ILGGGPNRIGQGIEFDYCC H + +++  GYETIM
Sbjct: 538  TDTAYMYSTYEEECEANPSNREKIMILGGGPNRIGQGIEFDYCCVHAALAMREDGYETIM 597

Query: 683  MNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYL 742
            +N NPETVSTDYDTSDRLYFEP+T+EDVL ++ +E+P+G+IVQ+GGQTPLKL     + L
Sbjct: 598  VNCNPETVSTDYDTSDRLYFEPVTLEDVLEIVRVEQPKGVIVQYGGQTPLKLC----RAL 653

Query: 743  DEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIA 802
            +E  +P         I GTSPD+ID AEDRERF  +++ L++ QP    A+SE +ALA +
Sbjct: 654  EEAGVP---------IIGTSPDAIDRAEDRERFQQMVQRLNLRQPANATARSEDEALAAS 704

Query: 803  KEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVD 862
            K IGYP+VVRPSYVLGGRAMEIVY +E L  Y+  AV+V  + PVL+D +L+ AIE+D+D
Sbjct: 705  KAIGYPLVVRPSYVLGGRAMEIVYQEEELKRYMREAVQVSNDSPVLLDHFLNCAIEVDID 764

Query: 863  ALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCG 922
            A+ D    VVIG IM+HIEQAGVHSGDSAC +P  ++     D I     K+A  L V G
Sbjct: 765  AVCDG-EIVVIGAIMQHIEQAGVHSGDSACSLPPYSLPQHIQDEIREQVKKMALELGVVG 823

Query: 923  LMNCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEV 982
            LMN Q A+    D++++E NPRASRTVPFVSK +G  LAK AA VM+GK+L ++GFT+E+
Sbjct: 824  LMNVQMAVQGE-DIFVIEVNPRASRTVPFVSKCVGESLAKVAARVMAGKTLAEVGFTQEI 882

Query: 983  IPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSG 1042
            IP   SVKEAV PF KF G D +LGPEM+STGEVMG+  SF  AFAKAQ+ A + LP +G
Sbjct: 883  IPPFFSVKEAVFPFAKFPGVDPILGPEMKSTGEVMGVGDSFAEAFAKAQLGASEILPTAG 942

Query: 1043 TVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGD 1102
              F+S+ +  KP   ++A   + +GF++V+T+GTA  +E  G+ V RV K+ EGRPH  D
Sbjct: 943  CAFISVREDDKPFAAQVAGDLVALGFEVVATAGTARVIEAAGLPVRRVNKVTEGRPHVVD 1002

Query: 1103 MVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTV 1162
            M+ N ++ +++ T+ G      D   +RR  L +K+   TT++G  A  EA++     TV
Sbjct: 1003 MIKNDEVTLIINTTEGRQ-SIADSYSIRRNALQHKICCTTTIAGGQAICEALKFGPEKTV 1061

Query: 1163 TMTALQDF 1170
                LQD 
Sbjct: 1062 RR--LQDL 1067


>gi|383316619|ref|YP_005377461.1| carbamoyl-phosphate synthase large subunit [Frateuria aurantia DSM
            6220]
 gi|379043723|gb|AFC85779.1| carbamoyl-phosphate synthase, large subunit [Frateuria aurantia DSM
            6220]
          Length = 1079

 Score = 1263 bits (3268), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 626/1068 (58%), Positives = 796/1068 (74%), Gaps = 26/1068 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KR D++ +LI+GAGPIVIGQACEFDYSG QACKALKEEGY VIL+NSNPATIMTDP  AD
Sbjct: 3    KRNDIKSVLIIGAGPIVIGQACEFDYSGAQACKALKEEGYRVILVNSNPATIMTDPDTAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
              YI P+  + VE+++ KERPD +LPTMGGQT LN A+ LA++G LEKY VELIGAK DA
Sbjct: 63   AVYIEPINWQTVEKIIAKERPDVVLPTMGGQTGLNCALDLADNGVLEKYNVELIGAKRDA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I+ AEDR+LF+ AM+ IG+  P +    T +  +    ++G +P IIRP+FTLGG+GGGI
Sbjct: 123  IRMAEDRELFRLAMRDIGLDCPRAETVKTFEAALEAQAKVG-YPTIIRPSFTLGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEFE I K GL  S   +VLVE+S+LGWKE+E+EV+RD ADN +I+CSIEN DPMG
Sbjct: 182  AYNREEFEEIVKRGLELSPVHEVLVEESVLGWKEFEMEVVRDTADNCIIVCSIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQRLRD SIA++R+IGV+ GGSNVQF +NP DG V+VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQRLRDASIAVLRKIGVDTGGSNVQFGINPKDGRVVVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKK-TPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT   TPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKIAAKLAVGYTLDELRNDITGGLTPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            FAFEKFP ++  LTTQMKSVGE MA+GR+F ES QKALR LE G +G    N   LD+  
Sbjct: 362  FAFEKFPQADARLTTQMKSVGEVMAIGRSFHESLQKALRGLEIGKNGL---NPTGLDYAT 418

Query: 507  EQ----LKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLL 562
            E+    LK  LR P PDR+  +    + G  ++E+H L++ID WFL  F++L+ VEQ + 
Sbjct: 419  EEGLATLKRELREPRPDRVFHVADGFRAGFSLEEMHALTYIDPWFLAAFEDLVLVEQAVR 478

Query: 563  TQSVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFE 622
             Q +S + +    E+K+ GFSD ++A    + E  VR  R +L V P YKRVD+CAAEF 
Sbjct: 479  EQGLSAIDQTRMRELKQLGFSDARLAELLATDEAAVRHLRKTLSVKPVYKRVDSCAAEFA 538

Query: 623  ANTPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIM 682
             +T YMYS+Y+ ECE+APT + K+++LGGGPNRIGQGIEFDYCC H + +L+  G+ETIM
Sbjct: 539  TSTAYMYSTYEEECEAAPTHRDKIMVLGGGPNRIGQGIEFDYCCVHAALALREDGFETIM 598

Query: 683  MNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYL 742
            +N NPETVSTDYDTSDRLYFEPLT+EDVL ++D+E+P+G+IVQ+GGQTPLKL+       
Sbjct: 599  VNCNPETVSTDYDTSDRLYFEPLTLEDVLAIVDIEQPKGVIVQYGGQTPLKLA------- 651

Query: 743  DEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIA 802
               R   A+G   V + GTSPDSID AEDRERF  +I++L + QP    A++  +A+A+A
Sbjct: 652  ---RALEAAG---VPVIGTSPDSIDLAEDRERFQQLIEKLGLRQPPNRTARNPDEAIALA 705

Query: 803  KEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVD 862
            +EIGYP+VVRPSYVLGGRAMEIVY+D  L  Y+  AV+V  + PVL+D++L  A+E+DVD
Sbjct: 706  REIGYPLVVRPSYVLGGRAMEIVYSDADLSRYIREAVQVSNDSPVLLDRFLDHAVEVDVD 765

Query: 863  ALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCG 922
             +AD+ G V++GGIMEHIE+AGVHSGDS+C +P  ++++   D +   +  +A+ L V G
Sbjct: 766  VIADAEGQVLVGGIMEHIEEAGVHSGDSSCSLPPFSLTAEMQDELRRQSELMARELKVIG 825

Query: 923  LMNCQYAITTSGD-VYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKE 981
            LMN Q+AI   GD VY+LE NPRASRTVPFVSKA G  LAK AA  M+G++L D G T E
Sbjct: 826  LMNTQFAI--QGDTVYVLEVNPRASRTVPFVSKATGVSLAKVAARAMAGRTLADQGQTTE 883

Query: 982  VIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLS 1041
            V+P + SVKEA+ PF KFQ  D +LGPEMRSTGEVMG+  +F  AFA+   AAG   P  
Sbjct: 884  VVPDYYSVKEAIFPFLKFQNVDPILGPEMRSTGEVMGVGRTFGAAFARGHEAAGIGAPKQ 943

Query: 1042 GTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAG 1101
            G VFLS+ D  K  L  +A+  ++ G+++V+T GT  FL  +G+A E+V K+ EGRPH  
Sbjct: 944  GKVFLSVRDADKDRLLPVARELVEHGYQLVATHGTQAFLAAQGLACEKVNKVQEGRPHVV 1003

Query: 1102 DMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALA 1149
            D++ NG++  +V T+ G      D   +RR  L ++V   TTV+GA A
Sbjct: 1004 DLIKNGELVYIVNTTEGKPA-IADSFSIRREALQHRVIHSTTVAGARA 1050


>gi|299769005|ref|YP_003731031.1| carbamoyl-phosphate synthase large subunit [Acinetobacter oleivorans
            DR1]
 gi|298699093|gb|ADI89658.1| carbamoyl-phosphate synthase, large subunit [Acinetobacter oleivorans
            DR1]
          Length = 1076

 Score = 1263 bits (3268), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 627/1080 (58%), Positives = 794/1080 (73%), Gaps = 36/1080 (3%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILI+GAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIKSILIIGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPSMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+T + V Q++EKERPDA+LPTMGGQTALN A+AL E G LEKY VELIGA  +A
Sbjct: 63   ATYIEPITWQTVAQIIEKERPDAVLPTMGGQTALNCALALDEHGVLEKYNVELIGASKEA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I+KAEDR LF  AM+ IG++ P + I  T++E ++I +  G FP+IIRP+FT+GG+GGGI
Sbjct: 123  IEKAEDRKLFDIAMRKIGLECPKAAIAETMEEALAIQSRFG-FPVIIRPSFTMGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEF  IC+ G   S T Q+L+++SL+GWKEYE+EV+RD  DN +I+C+IEN DPMG
Sbjct: 182  AYNREEFLEICERGFDLSPTHQLLIDESLIGWKEYEMEVVRDKNDNCIIVCAIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGVE GGSNVQF +NP DG ++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQLMRNASVAVLREIGVETGGSNVQFGINPKDGRMVVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKK-TPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT   TPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKIAAKLAVGYTLDELKNDITGGVTPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGW------GCSNVK 500
            F FEKFP +EP+LTTQMKSVGE MA+GR FQES QKALR LE G SG+      G +N K
Sbjct: 362  FNFEKFPQAEPVLTTQMKSVGEVMAIGRNFQESVQKALRGLEVGVSGFDEKIEAGATNAK 421

Query: 501  ELDWDWEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQF 560
                  E +   L+VP P+R+  +  A + G  + E+ E + ID+WFL Q ++++  E  
Sbjct: 422  ------ETILKELKVPGPERIWYVADAFRHGFSLGEVFEATKIDRWFLIQIQDIVKTEAE 475

Query: 561  LLTQSVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAE 620
            +      ++  D+    KR+G SD +IA     ++K+ R++R +LGV P YKRVDTCAAE
Sbjct: 476  VKALGFGDLNADNIRAFKRKGLSDLRIAHLMGISQKQFRKQRWNLGVYPVYKRVDTCAAE 535

Query: 621  FEANTPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYET 680
            FE+ T YMYS+YD ECE+ P+ + K++++GGGPNRIGQGIEFDYCC H + +++  GYET
Sbjct: 536  FESGTAYMYSTYDEECEANPSNRDKIMVIGGGPNRIGQGIEFDYCCVHAALAMREDGYET 595

Query: 681  IMMNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQ 740
            IM+N NPETVSTDYDTSDRLYFEP+T+EDVL ++  E+P+G+IVQ+GGQTPLKL+    +
Sbjct: 596  IMVNCNPETVSTDYDTSDRLYFEPVTLEDVLEIVRTEKPKGVIVQYGGQTPLKLA----R 651

Query: 741  YLDEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALA 800
             L+E   P         I GTSPD+ID AEDRERF  +I+ L + QP   I KS  + ++
Sbjct: 652  ALEEAGTP---------IIGTSPDAIDRAEDRERFQQMIQRLQLRQPNNSIVKSAEEGIS 702

Query: 801  IAKEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEID 860
             A ++GYP+VVRPSYVLGGRAMEIVY +E L  YL  AV+   E PVL+D++L DA E+D
Sbjct: 703  EAAKVGYPLVVRPSYVLGGRAMEIVYNEEELKRYLREAVQASNEAPVLLDRFLDDATEVD 762

Query: 861  VDALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNV 920
            VD ++D   +VVIGGIM+HIEQAG+HSGDSAC IP  ++S    D +   T+ +AK L V
Sbjct: 763  VDCVSDG-KDVVIGGIMQHIEQAGIHSGDSACSIPPYSLSKEIQDEMRRQTVAMAKELGV 821

Query: 921  CGLMNCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTK 980
             GLMN Q+A+    DVY+LE NPRASRTVPFVSK IG  LAK AA  M+G+SL   GFTK
Sbjct: 822  VGLMNVQFAV-KGDDVYVLEVNPRASRTVPFVSKCIGDSLAKVAARCMAGQSLESQGFTK 880

Query: 981  EVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQK--- 1037
            E+IP H +VKEAV PF KFQG D +LGPEM+STGEVMG+  +F  AF KA + +  +   
Sbjct: 881  EIIPTHFAVKEAVFPFAKFQGVDPMLGPEMKSTGEVMGVGKTFGEAFYKAVLGSNDRLPG 940

Query: 1038 LPLSGTV---FLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMH 1094
            LP  G V   FLS+ +  K ++  IAK     GFK+++T GT   L+  G+  E V K+ 
Sbjct: 941  LPTEGEVKHAFLSVRESDKKYIADIAKKLAAYGFKLIATGGTYQVLKEAGLECESVNKVT 1000

Query: 1095 EGRPHAGDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAI 1154
            EGRPH  D + NG+I ++V T+ G    Q D   +RR  L  KV   TT++GA A  +A 
Sbjct: 1001 EGRPHIVDRLKNGEIHLIVNTTEGKQA-QYDSAMIRRAALQGKVYYTTTINGAEAVCQAF 1059


>gi|407801036|ref|ZP_11147880.1| carbamoyl phosphate synthase large subunit [Alcanivorax sp. W11-5]
 gi|407024473|gb|EKE36216.1| carbamoyl phosphate synthase large subunit [Alcanivorax sp. W11-5]
          Length = 1080

 Score = 1263 bits (3267), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 624/1091 (57%), Positives = 811/1091 (74%), Gaps = 34/1091 (3%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILI+GAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIQSILIIGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPAMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+T E VE+++EKERPDALLPTMGGQTALN A+ LA+ G L+KY VE+IGA  DA
Sbjct: 63   ATYIEPITWETVEKIIEKERPDALLPTMGGQTALNCALDLAKHGVLDKYNVEMIGANADA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  F +AM++IG++ P + + ++++E  S+ ++IG FP IIRP+FT+GG+GGGI
Sbjct: 123  IDKAEDRSRFDKAMRSIGLECPRAALAHSMEEAFSVLDDIG-FPCIIRPSFTMGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEF+ IC+ GL  S T ++L+++SLLGWKEYE+EV+RD  DN +I+C+IEN+DPMG
Sbjct: 182  AYNREEFQEICERGLDLSPTKELLIDESLLGWKEYEMEVVRDRKDNCIIVCTIENLDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKE+Q +R+ S+A++REIGVE GGSNVQF + P  G ++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEFQIMRNASLAVLREIGVETGGSNVQFGMCPDTGRMVVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITK-KTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT  KTPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKIAAKLAVGYTLDELQNDITGGKTPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLE---CGFSGWGCSNVKELD 503
            F FEKF  ++P+LTTQMKSVGE MA+GR FQES  KALR LE   CGF         +LD
Sbjct: 362  FNFEKFAAADPVLTTQMKSVGEVMAIGRNFQESLHKALRGLETDSCGFD-------PKLD 414

Query: 504  WD----WEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQ 559
             +     +Q+  SL  P PDR+  +  A + G+ VDE+  L+ ID+WFL Q ++L+  EQ
Sbjct: 415  PENGDLRQQVIESLASPGPDRIWVLGDAFRAGLTVDELFRLTKIDRWFLVQIEDLVRDEQ 474

Query: 560  FLLTQSVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAA 619
             L   + + + +D  Y +KR+GFSD ++A      E +VR KR  L + P YKRVDTCAA
Sbjct: 475  RLAASTFTELDRDGLYRLKRKGFSDMRLAHLLGVKEADVRGKRHELNIRPVYKRVDTCAA 534

Query: 620  EFEANTPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYE 679
            EF  +T YMYSSYD ECE+ P+ ++K++++GGGPNRIGQGIEFDYCC H + +++  GYE
Sbjct: 535  EFATSTAYMYSSYDEECEAQPSDREKIMVIGGGPNRIGQGIEFDYCCVHAALAMREDGYE 594

Query: 680  TIMMNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIH 739
            TIM+N NPETVSTDYDTSDRLYFEP+T+EDVL ++  E+P+G+IVQ+GGQTPLKL+    
Sbjct: 595  TIMVNCNPETVSTDYDTSDRLYFEPVTLEDVLEIVAKEKPKGVIVQYGGQTPLKLA---- 650

Query: 740  QYLDEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADAL 799
                  R   A+G   V I GTSPD+ID AEDRERF  ++ +L ++QP    A+S  D +
Sbjct: 651  ------RALQAAG---VPIIGTSPDAIDEAEDRERFQQMVNKLGLKQPPNRTARSIEDGV 701

Query: 800  AIAKEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEI 859
             +A EIGYP+VVRPSYVLGGRAMEIV+ ++ L +Y++NAV V  E PVL+D++L DAIE 
Sbjct: 702  RLAAEIGYPLVVRPSYVLGGRAMEIVFNEDELRSYMKNAVSVSNESPVLLDRFLDDAIET 761

Query: 860  DVDALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLN 919
            DVDA+ D   +VVIGGIM+HIEQAGVHSGDSAC +P   ++    + +   +  +A+ L 
Sbjct: 762  DVDAVCDG-EDVVIGGIMQHIEQAGVHSGDSACSLPPYNLAEDVQNVMREQSAAMARELG 820

Query: 920  VCGLMNCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFT 979
            V GLMN Q+A+   G+VY+LE NPRASRTVP+VSK IG  LAK AA  M+G SL    FT
Sbjct: 821  VIGLMNVQFAV-KDGEVYVLEVNPRASRTVPYVSKCIGVSLAKVAARCMAGTSLKAQNFT 879

Query: 980  KEVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLP 1039
            +E++P++ +VKEAV PF KF   D +LGPEM+STGEVMG+  +F  A+ KA +AAG +LP
Sbjct: 880  REIVPQYYNVKEAVFPFAKFPKVDPILGPEMKSTGEVMGVGATFAEAYGKAALAAGDRLP 939

Query: 1040 LSGTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPH 1099
              GTVF+S+ ++ K     +A+   ++GF +V+T+GTA  L   GI V RV K+ EGRPH
Sbjct: 940  RKGTVFISVREVDKKAALEVAQELHELGFTLVATTGTAARLSEAGIPVTRVNKVLEGRPH 999

Query: 1100 AGDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKS 1159
              DM+ N +I M++ T+ G    + D   +RR  L +KV   TT+S A A  + ++    
Sbjct: 1000 VVDMIKNDEIAMIINTTEGKQAVR-DSFAIRRSALQHKVYYTTTISAAWAVCQTLK--LD 1056

Query: 1160 NTVTMTALQDF 1170
            +T+ +  LQD 
Sbjct: 1057 DTLQVRRLQDM 1067


>gi|309792429|ref|ZP_07686895.1| carbamoyl-phosphate synthase, large subunit [Oscillochloris
            trichoides DG-6]
 gi|308225539|gb|EFO79301.1| carbamoyl-phosphate synthase, large subunit [Oscillochloris
            trichoides DG6]
          Length = 1076

 Score = 1263 bits (3267), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 630/1091 (57%), Positives = 806/1091 (73%), Gaps = 28/1091 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            +RTDL  ILILG+GPIVIGQACEFDYSG QACKAL+EEGY V+L+NSNPATIMTDPGLAD
Sbjct: 3    RRTDLHTILILGSGPIVIGQACEFDYSGAQACKALREEGYRVVLVNSNPATIMTDPGLAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+T   +E+++ KERPDA+LPT+GGQTALNLA+ L E+G L++Y VELIGA ++A
Sbjct: 63   ATYIEPLTVPSLERIIAKERPDAILPTVGGQTALNLAIDLHEAGVLQRYSVELIGASVNA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            ++ AEDR LFK  M  IG+    SG  ++LDE ++I  E G FP IIRP+FTLGG GGGI
Sbjct: 123  VRVAEDRQLFKDKMLEIGLSVARSGTAHSLDEALTIVGETG-FPAIIRPSFTLGGAGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN EEF  I + GL AS  +QVL+E+S+LGWKE+E+EVMRD  DN VIICSIEN+DPMG
Sbjct: 182  AYNIEEFREIVERGLDASPVTQVLIEESVLGWKEFEMEVMRDRMDNGVIICSIENIDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPA TLTD+EYQ++RD SIA++R +GVE GGSNVQFAVNP DG + VIEMN
Sbjct: 242  VHTGDSITVAPAMTLTDREYQQMRDQSIAVLRAVGVETGGSNVQFAVNPHDGRIYVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRF 447
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++PNDIT++TPASFEP++DYVV KIPR+
Sbjct: 302  PRVSRSSALASKATGFPIAKIAAKLAVGYTLDELPNDITRETPASFEPTLDYVVVKIPRW 361

Query: 448  AFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDWE 507
             FEKF  ++  LTT MKSVGE MA+GRTF E+FQKA RS+E G  GWG    +++D D  
Sbjct: 362  TFEKFAQADQTLTTSMKSVGEVMAIGRTFPEAFQKAWRSMEQGRMGWGADGKEKIDPD-- 419

Query: 508  QLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSVS 567
            +L+  L  P+P+R   I  A++ GM   ++  L+ ID WF+ QF++++++E  L   ++ 
Sbjct: 420  RLRERLITPHPERYFYIRYALQSGMTSAQVSALTHIDTWFIEQFEQILNLEGRLRAFTLD 479

Query: 568  NMTKDDFYEVKRRGFSDKQIAF--------ATKSTEKEVREKRLSLGVIPSYKRVDTCAA 619
             +  D   + KR GFSD Q+A          T S E  VR++RL+  + P++ RVDTCAA
Sbjct: 480  TIPADLLRQAKRMGFSDAQLAHLLNAPSSGPTWSAEMAVRQRRLAQKISPTFHRVDTCAA 539

Query: 620  EFEANTPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYE 679
            EF A TPY+YSSY+ ECE+ PTQ+KK++ILG GPNRIGQGIEFDYCCCH  F L+  GYE
Sbjct: 540  EFPAFTPYLYSSYETECEAEPTQRKKIMILGSGPNRIGQGIEFDYCCCHAVFGLRDMGYE 599

Query: 680  TIMMNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIH 739
            TIM+N NPETVSTDYDT+DRLYFEPLT+EDVLN++D+ERP+G++VQFGGQTPLKL+    
Sbjct: 600  TIMVNCNPETVSTDYDTADRLYFEPLTLEDVLNIVDVERPDGVLVQFGGQTPLKLA---- 655

Query: 740  QYLDEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADAL 799
                  R   A+G   V IWGT PD+ID AEDR+RF A++  L I  P  G A S  +A 
Sbjct: 656  ------RALEAAG---VPIWGTPPDAIDLAEDRDRFGALLDRLGIPAPAHGSATSWEEAR 706

Query: 800  AIAKEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEI 859
            A A++IGYPVVVRPSYVLGGRAM IVY + +L  Y+  AV   PE P+LID++L DA E+
Sbjct: 707  AAAEQIGYPVVVRPSYVLGGRAMAIVYDETSLERYMREAVAASPEHPILIDRFLEDAFEM 766

Query: 860  DVDALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLN 919
            DVDA++D   +V++ GIME IE AGVHSGDSAC+IPT  ++   ++T+  +T +LA+ L 
Sbjct: 767  DVDAVSDGS-SVIVAGIMEQIELAGVHSGDSACVIPTYMVAPEHVETLRRYTEQLARELG 825

Query: 920  VCGLMNCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGF- 978
            V GLMN QYA+     VY+LE NPRASRT PFV+KA G P A+ AA  ++G+ L D+   
Sbjct: 826  VVGLMNIQYAMKDD-IVYVLEVNPRASRTTPFVAKATGAPWAQIAAKAVAGQKLADMDIT 884

Query: 979  TKEVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKL 1038
            T         VKE VLP+ +F G D LLGPEM+STGE MG   +F  AFAKAQ + GQ L
Sbjct: 885  TNNAGASKYHVKEVVLPWARFPGVDTLLGPEMKSTGEGMGSGATFGEAFAKAQQSCGQHL 944

Query: 1039 PLSGTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRP 1098
            P+SG+ F+S+ND  K +L  IA+  + +GF + +T GTA +L   G+ V  + K++EGRP
Sbjct: 945  PMSGSAFISVNDRDKENLAPIARDLVAMGFTLFATGGTAAYLRGVGLEVTTIYKVNEGRP 1004

Query: 1099 HAGDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLK 1158
            +A D V NGQI +++ T  G S    D + +RR  + Y +P +TT+SGA A  +AIR+L+
Sbjct: 1005 NAVDYVKNGQIALIINTPLGKS-SFFDEVAIRRAAITYGIPSLTTLSGAAAAVQAIRALR 1063

Query: 1159 SNTVTMTALQD 1169
             +  T+ +LQD
Sbjct: 1064 DDVWTVESLQD 1074


>gi|358448890|ref|ZP_09159383.1| carbamoyl-phosphate synthase, large subunit [Marinobacter
            manganoxydans MnI7-9]
 gi|357226893|gb|EHJ05365.1| carbamoyl-phosphate synthase, large subunit [Marinobacter
            manganoxydans MnI7-9]
          Length = 1072

 Score = 1263 bits (3267), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 629/1086 (57%), Positives = 814/1086 (74%), Gaps = 23/1086 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILILGAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIQSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPVMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+T + VE+++EKE+PDALLPTMGGQTALN A+ L   G LEK+GVE+IGA  D 
Sbjct: 63   ATYIEPITWKTVEKIIEKEQPDALLPTMGGQTALNCALDLERHGILEKHGVEMIGANADT 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDRD F +AMK IG++ P + I ++++E   +A++IG FP IIRP+FT+GG+GGGI
Sbjct: 123  IDKAEDRDRFDKAMKKIGLECPRATIAHSMEEAWKVADDIG-FPCIIRPSFTMGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN++EFE IC  GL  S T+++L+++SL+GWKEYE+EV+RD  DN +I+C+IEN D MG
Sbjct: 182  AYNRDEFEEICTRGLDLSPTNELLIDESLIGWKEYEMEVVRDKNDNCIIVCAIENFDAMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGVE GGSNVQF +NP  G ++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQIMRNASLAVLREIGVETGGSNVQFGMNPDTGRMVVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKK-TPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ N+IT   TPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGYTLDELRNEITGGVTPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWD- 505
            F FEKFP ++  LTTQMKSVGE MA+GRTFQES QKALR LE G  G+    +++LD + 
Sbjct: 362  FTFEKFPQADARLTTQMKSVGEVMAIGRTFQESLQKALRGLEVGSEGFD-EKLEDLDSEN 420

Query: 506  -WEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQ 564
              E L   L VP  DR+  I  A + GM V+++HE + +D W+L Q ++LI  EQ L + 
Sbjct: 421  SRETLTRELNVPGADRIWYIGDAFRAGMTVEDLHEHTHVDPWYLVQIEDLIREEQALKSA 480

Query: 565  SVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEAN 624
              +++ +   + +KR+GFSD ++A     +E  +R+ R  L + P YKRVDTCAAEF ++
Sbjct: 481  GKADIDQATLFRLKRKGFSDARLAKLLGISEVSLRKLRHDLDIRPVYKRVDTCAAEFASD 540

Query: 625  TPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMN 684
            T YMYS+Y+ ECES  + ++K++++GGGPNRIGQGIEFDYCC H + +++  GYETIM+N
Sbjct: 541  TAYMYSTYEEECESDASDREKIVVIGGGPNRIGQGIEFDYCCVHAALAMREDGYETIMIN 600

Query: 685  SNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDE 744
             NPETVSTDYDTSDRLYFEP+T+EDVL +I +E+P+G+IVQ+GGQTPLKL+         
Sbjct: 601  CNPETVSTDYDTSDRLYFEPITLEDVLEIIHVEKPKGVIVQYGGQTPLKLA--------- 651

Query: 745  HRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKE 804
             R   A+G   V I GTSPD+ID AEDRERF  +I  L ++QP+    +S  + +  A+E
Sbjct: 652  -RGLEAAG---VPIIGTSPDAIDRAEDRERFQQMITRLGLKQPENATVRSHEEGILAARE 707

Query: 805  IGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDAL 864
            IGYP+VVRPSYVLGGRAMEIVY +E LV Y+ NAV V  + PVL+D +L+ AIE+D+DA+
Sbjct: 708  IGYPLVVRPSYVLGGRAMEIVYDEEELVRYMRNAVLVSNDSPVLLDHFLNAAIEVDIDAI 767

Query: 865  ADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLM 924
            +D   +VVIGGIM+HIEQAGVHSGDSAC +P  T+S    D +     K+A  L+V GLM
Sbjct: 768  SDG-KDVVIGGIMQHIEQAGVHSGDSACSLPPYTLSQQVQDEMRDAVKKMAIELDVVGLM 826

Query: 925  NCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIP 984
            N Q A    G++Y++E NPRASRTVPFVSKAIG  LAK AA VM+GK+L +L FT+E+IP
Sbjct: 827  NVQLA-WQDGEIYVIEVNPRASRTVPFVSKAIGVSLAKVAARVMAGKTLKELEFTQEIIP 885

Query: 985  KHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTV 1044
             + +VKE+V PF KF   D +LGPEM+STGEVMG+  SF  AFAKA +A G++LP  GT 
Sbjct: 886  SYYAVKESVFPFNKFPAVDPILGPEMKSTGEVMGLGDSFDEAFAKAALAVGERLPAKGTA 945

Query: 1045 FLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMV 1104
            F+S+ D+ KP   ++A+  ++ GFK+V+T+GTA  L+  GI V+RV K+ EGRPH  D +
Sbjct: 946  FMSVRDVDKPGAAKVARDLVEAGFKLVATTGTAKALKEAGIKVDRVNKVREGRPHIVDAI 1005

Query: 1105 ANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTVTM 1164
             NGQ+Q+++ T+ G      D  ++R+  L  KV   TT++G  A   AI+     TV  
Sbjct: 1006 KNGQVQLIINTTEGRKAIS-DSAQIRQSALQTKVTYTTTLAGGEAFCRAIKFGPERTVRR 1064

Query: 1165 TALQDF 1170
              LQD 
Sbjct: 1065 --LQDL 1068


>gi|335044224|ref|ZP_08537249.1| carbamoylphosphate synthase large subunit [Methylophaga
            aminisulfidivorans MP]
 gi|333787470|gb|EGL53354.1| carbamoylphosphate synthase large subunit [Methylophaga
            aminisulfidivorans MP]
          Length = 1072

 Score = 1262 bits (3266), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 624/1056 (59%), Positives = 798/1056 (75%), Gaps = 22/1056 (2%)

Query: 86   LGKRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGL 145
            + KRTD++ ILILGAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +
Sbjct: 1    MAKRTDIQSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPNM 60

Query: 146  ADRTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKL 205
            AD TYI P+T + V +V+E ERPDA+LPTMGGQTALN A+ L + G LE++GVE+IGA  
Sbjct: 61   ADATYIEPVTWQAVSKVIEAERPDAILPTMGGQTALNCALDLEKHGILEQFGVEMIGADS 120

Query: 206  DAIKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGG 265
            +AI KAEDRDLF++AM+ IG+  P S I +TLDE + +  + G FP+IIRP+FT+GG+GG
Sbjct: 121  EAINKAEDRDLFREAMRKIGLDMPQSDIAHTLDEALQVQEKFG-FPVIIRPSFTMGGSGG 179

Query: 266  GIAYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDP 325
            GIAYNK++F  IC+ GL  S TS++L+E+S++GWKEYE+EV+RD  DN +IICSIEN+DP
Sbjct: 180  GIAYNKQDFIEICQRGLYLSPTSELLIEESIIGWKEYEMEVVRDRKDNAIIICSIENLDP 239

Query: 326  MGVHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIE 385
            MGVHTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGV+ GGSNVQFAVNP  G +++IE
Sbjct: 240  MGVHTGDSITVAPAQTLTDKEYQIMRNASLAVLREIGVDTGGSNVQFAVNPETGRLIIIE 299

Query: 386  MNPRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKI 444
            MNPRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ N+IT   TPASFEP+IDYVVTK+
Sbjct: 300  MNPRVSRSSALASKATGFPIAKVAAKLAVGYTLDELQNEITGNATPASFEPTIDYVVTKV 359

Query: 445  PRFAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDW 504
            PRF FEKFP ++  L+TQMKSVGE MA+GR FQES QKALR LE    G   + V +L  
Sbjct: 360  PRFTFEKFPQADNRLSTQMKSVGEVMAIGRNFQESLQKALRGLEIDRDGL--TEVIDLTE 417

Query: 505  D--WEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLL 562
            +   E L+  L +P  DR+  +  A + G   DEI +L+ ID WFL Q +EL+ +E  L 
Sbjct: 418  ENIAETLRRELSLPGSDRLWYVADAFRYGFSFDEIQKLTHIDPWFLIQIEELVTLENQLK 477

Query: 563  TQSVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFE 622
             +S++++ + + Y +KR+GFSD ++A   + TEK++RE R ++ V P YKRVDTC AEF 
Sbjct: 478  ERSLNDIDQQEMYALKRKGFSDSRLAKLLQKTEKQIREYRQAMQVRPVYKRVDTCGAEFA 537

Query: 623  ANTPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIM 682
              T YMYS+YD ECE+ P+ + K++ILGGGPNRIGQGIEFDYCC H + +L+  GYETIM
Sbjct: 538  TGTAYMYSTYDMECEANPSDRDKIMILGGGPNRIGQGIEFDYCCVHAALALREDGYETIM 597

Query: 683  MNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYL 742
            +N NPETVSTDYDTSDRLYFE LT+EDVL +++LE+P+G+IVQFGGQTPLKL+       
Sbjct: 598  VNCNPETVSTDYDTSDRLYFESLTLEDVLEIVELEKPKGVIVQFGGQTPLKLA------- 650

Query: 743  DEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIA 802
               R   A+G   V I GTSPD+ID AEDRERF  ++++L++ QP   +A S   A+A+A
Sbjct: 651  ---RALEAAG---VPIIGTSPDAIDHAEDRERFQQMVEKLNLLQPPNRLAHSVDTAVALA 704

Query: 803  KEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVD 862
             EIGYP+VVRPSYVLGGRAMEIVY +E L  Y+ NAV+V  E PVL+D++L DAIE+DVD
Sbjct: 705  SEIGYPLVVRPSYVLGGRAMEIVYNEEELQRYMLNAVKVSNESPVLLDRFLDDAIEVDVD 764

Query: 863  ALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCG 922
            A+ D   +V+IGGIMEHIEQAGVHSGDSAC +P  ++S +  D +     ++A  L V G
Sbjct: 765  AICDG-KDVLIGGIMEHIEQAGVHSGDSACALPPYSLSQATQDQLREQVRQMALELGVKG 823

Query: 923  LMNCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEV 982
            LMN Q+AI     +Y+LE NPRASRTVP+VSK+IG PLAK AA  M+G+SL D G TKEV
Sbjct: 824  LMNTQFAIKGE-QIYILEVNPRASRTVPYVSKSIGVPLAKIAARAMAGRSLVDQGVTKEV 882

Query: 983  IPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSG 1042
            IP + SVKEAV PF KFQG D +LGPEM+STGEVMG+  +F  AFAK+Q+AA   LP  G
Sbjct: 883  IPSYYSVKEAVFPFIKFQGVDPILGPEMKSTGEVMGVGRTFGEAFAKSQLAASVVLPTGG 942

Query: 1043 TVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGD 1102
              F+S+ +  K  + +IAK    +GF +++T GT   LE  G+  E V K+ EG+PH  D
Sbjct: 943  KAFISVREADKVAVIQIAKDLSSLGFALLATRGTQRVLEEAGVNCEPVNKVAEGQPHIVD 1002

Query: 1103 MVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKV 1138
            M+ N +I ++V T+ G      D  ++RR  L ++V
Sbjct: 1003 MIKNDEIDLIVNTTEGRQ-SVADSREIRRAALQHQV 1037


>gi|85860899|ref|YP_463101.1| carbamoyl phosphate synthase large subunit [Syntrophus aciditrophicus
            SB]
 gi|85723990|gb|ABC78933.1| carbamoyl-phosphate synthase large chain [Syntrophus aciditrophicus
            SB]
          Length = 1069

 Score = 1262 bits (3266), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 635/1083 (58%), Positives = 815/1083 (75%), Gaps = 20/1083 (1%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KR DL+KILI+G+GPI+I QACEFDYSGTQACKAL+EEGY V+LINSNPATIMTDP  AD
Sbjct: 3    KRKDLKKILIIGSGPIIISQACEFDYSGTQACKALREEGYSVVLINSNPATIMTDPETAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
            RTYI P+TPE VE+++ +ERPDALL T+GGQT LN AVA+AESG LE+YGVE+IGA L  
Sbjct: 63   RTYIEPITPEAVEKIIARERPDALLSTLGGQTGLNTAVAVAESGLLERYGVEMIGASLPV 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR+LF++AM++IG++ P SG   T++E ++IA EIG FP+I+RP+FTLGGTG G+
Sbjct: 123  IHKAEDRELFRRAMESIGLRVPRSGFARTMEEVLTIAEEIG-FPVIVRPSFTLGGTGSGV 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EE     +AGL AS+  ++++E+S LGWKEYELEVMRD ADNVVIICSIEN+DPMG
Sbjct: 182  AYNREELVEQARAGLEASMIHEIMLEESALGWKEYELEVMRDRADNVVIICSIENLDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTG+SITVAPAQTLTD EYQ +R+ +IAI+REIGVE GGSNVQFAV+P  GE++VIEMN
Sbjct: 242  VHTGESITVAPAQTLTDAEYQHMRNAAIAIMREIGVETGGSNVQFAVHPETGEMIVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRF 447
            PRVSRSSALASKATGFPIA++AAKL+VGY+LD+IPNDIT++T ASFEP++DY V KIPR+
Sbjct: 302  PRVSRSSALASKATGFPIARIAAKLAVGYTLDEIPNDITRETMASFEPTLDYCVVKIPRW 361

Query: 448  AFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDWE 507
             FEKFP +E +LTT MKSVGE MA+GRTF+E+ QKA+RSLE G  G   +   EL    E
Sbjct: 362  TFEKFPETEDILTTSMKSVGETMAIGRTFKEALQKAVRSLEIGRFGISEALPAELSNPEE 421

Query: 508  QLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSVS 567
            +LK  L  PN  R+  + AA + GM +++IH L+ ID WFL Q +++I  E     ++ S
Sbjct: 422  RLKARLITPNSQRLFYLAAAFEFGMSLEDIHRLTQIDPWFLDQIRQIIQAEGIFRQETPS 481

Query: 568  NMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTPY 627
                +   E KR GFSD+++       E E+R +R S  ++P YK VDTCAAEFEA TPY
Sbjct: 482  G---EVLREAKRWGFSDRRLGELWNVPESEIRSRRFSENLLPVYKLVDTCAAEFEAYTPY 538

Query: 628  MYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSNP 687
             YS+Y+ E E+ P  K KVLI+GGGPNRIGQGIEFDYCC H SF+L+  GYE++M+NSNP
Sbjct: 539  YYSTYEEENEARPWAKPKVLIIGGGPNRIGQGIEFDYCCVHASFALREEGYESLMVNSNP 598

Query: 688  ETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHRL 747
            ETVSTDYDTSD+L+FEP+T+EDVL++I+ E+PEG+IVQFGGQTPL L+  +         
Sbjct: 599  ETVSTDYDTSDKLFFEPVTLEDVLHIIECEKPEGVIVQFGGQTPLNLAKGLE-------- 650

Query: 748  PSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEIGY 807
              A+G    +I GTSPDSID AEDR+RF  I+ +LS+ QP        A AL  A+ IGY
Sbjct: 651  --AAG---AKILGTSPDSIDRAEDRKRFQEIVDKLSLNQPVNATVTDVAGALEAAEHIGY 705

Query: 808  PVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALADS 867
            PV+VRPSYVLGGR+MEIVY  ++L  ++E A++V P+ P+LID++L DAIE+DVDA++D 
Sbjct: 706  PVLVRPSYVLGGRSMEIVYDADSLSQFMERALKVSPDHPILIDQFLEDAIEVDVDAISDG 765

Query: 868  CGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNCQ 927
                V+ GIMEHIE+AG+HSGDSAC++PT + S   L  I S T ++A+ L V GLMN Q
Sbjct: 766  T-ETVVAGIMEHIEEAGIHSGDSACVLPTMSFSEDFLGLIESQTERIAQELRVIGLMNIQ 824

Query: 928  YAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPKHV 987
            YA+   G +Y+LE NPRASRTVPFVSKAIG PLAK A  VM G+SL +LGFT+   P HV
Sbjct: 825  YAV-KEGILYVLEVNPRASRTVPFVSKAIGVPLAKLATKVMLGRSLKELGFTEAFRPAHV 883

Query: 988  SVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVFLS 1047
            SVKEAV PF +F   +++LGPEMRSTGEVMGID SF +AFAK+Q+A G  +P +G VF+S
Sbjct: 884  SVKEAVFPFNRFPNAEIVLGPEMRSTGEVMGIDSSFGLAFAKSQMAVGFSIPRAGRVFIS 943

Query: 1048 LNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVANG 1107
            ++D+ K  +  IA+ F ++GF+I++T GTA +L    I VE V K+ EGRPH  D + NG
Sbjct: 944  VHDIHKEKITPIARRFREMGFEILATQGTAAYLRKNDIPVETVHKVSEGRPHIVDRIKNG 1003

Query: 1108 QIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTVTMTAL 1167
             + +++ TS G    + D   +RR  L   +   TT++GA A  EA+ +++     +  L
Sbjct: 1004 DVAIVINTSVGRRPTR-DAYFIRRSALTCNILYSTTIAGAGALCEAVAAMRQGDWDVQPL 1062

Query: 1168 QDF 1170
            Q +
Sbjct: 1063 QAY 1065


>gi|333913563|ref|YP_004487295.1| carbamoyl-phosphate synthase large subunit [Delftia sp. Cs1-4]
 gi|333743763|gb|AEF88940.1| carbamoyl-phosphate synthase, large subunit [Delftia sp. Cs1-4]
          Length = 1082

 Score = 1262 bits (3266), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 645/1091 (59%), Positives = 789/1091 (72%), Gaps = 50/1091 (4%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTDL+ ILI+GAGPIVIGQACEFDYSG QACKAL+EEGY+VILINSNPATIMTDP  AD
Sbjct: 3    KRTDLKSILIIGAGPIVIGQACEFDYSGVQACKALREEGYKVILINSNPATIMTDPATAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+T + VE+++ KERPDA+LPTMGGQTALN A+ L  +G L KY VELIGA  +A
Sbjct: 63   VTYIEPITWQTVEKIIAKERPDAILPTMGGQTALNCALDLWRNGVLHKYKVELIGATPEA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  FK AM  IG+ +  SGI +++DE  ++  E+G FP +IRP+FTLGGTGGGI
Sbjct: 123  IDKAEDRLKFKDAMTRIGLGSARSGIAHSMDEAWAVQKEMG-FPTVIRPSFTLGGTGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN EEFE ICK GL AS T+++L+E+SLLGWKEYE+EV+RD ADN +IICSIEN+DPMG
Sbjct: 182  AYNPEEFETICKRGLEASPTNELLIEESLLGWKEYEMEVVRDKADNCIIICSIENLDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGV+ GGSNVQF+VNP DG ++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQIMRNASLAVLREIGVDTGGSNVQFSVNPKDGRMIVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT  KTPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGYTLDELKNDITGGKTPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            FAFEKFP ++  LTTQMKSVGE MA+GRTFQESFQKALR LE G  G     + E   D 
Sbjct: 362  FAFEKFPAADNRLTTQMKSVGEVMAIGRTFQESFQKALRGLEVGVDG-----MNEKTQDR 416

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
            E L+  L  P PDR+  +  A   G  +DE+H ++ IDKWFL Q +E++ +E  L     
Sbjct: 417  EILEKELGEPGPDRIWYVGDAFAAGWTLDEVHNITKIDKWFLVQIEEIVKIELEL----- 471

Query: 567  SNMTKDDFYE-----------------VKRRGFSDKQIAFATKSTEKEVREKRLSLGVIP 609
                 D  YE                 +K++GFSD+++A    S EK VRE R +LGV P
Sbjct: 472  -----DQVYEEKGDAALAALDATTLRTLKQKGFSDRRLAKLLHSNEKAVREARKALGVRP 526

Query: 610  SYKRVDTCAAEFEANTPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHT 669
             +KRVDTCAAEF  +T YMYS+YD ECE+ PT KKK+++LGGGPNRIGQGIEFDYCC H 
Sbjct: 527  VFKRVDTCAAEFATDTAYMYSTYDEECEAEPTDKKKIMVLGGGPNRIGQGIEFDYCCVHA 586

Query: 670  SFSLQSAGYETIMMNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQ 729
            + +++  GYETIM+N NPETVSTDYDTSDRLYFEPLT+EDVL V+ +E+P G+IVQ+GGQ
Sbjct: 587  ALAMREDGYETIMVNCNPETVSTDYDTSDRLYFEPLTLEDVLEVVAVEKPVGVIVQYGGQ 646

Query: 730  TPLKLSLPIHQYLDEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKG 789
            TPLKL+L     L++  +P         I GT+PD IDAAEDRERF  ++ EL + QP  
Sbjct: 647  TPLKLALG----LEKEGVP---------IIGTTPDMIDAAEDRERFQKLLHELGLRQPPN 693

Query: 790  GIAKSEADALAIAKEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLI 849
              A++E +AL  A  +GYP+VVRPSYVLGGRAMEIV+    L  Y+  AV+V  + PVL+
Sbjct: 694  ATARTEPEALEKAAGLGYPLVVRPSYVLGGRAMEIVHEQRDLERYMREAVKVSNDSPVLL 753

Query: 850  DKYLSDAIEIDVDALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISS 909
            D +LS+AIE DVD + D  G V IGG+MEHIEQAGVHSGDSAC +P   +    +  I  
Sbjct: 754  DHFLSNAIECDVDCVRDREGAVFIGGVMEHIEQAGVHSGDSACSLPPYYLKPETVAEIKR 813

Query: 910  WTIKLAKRLNVCGLMNCQYAI--TTSGDV-YLLEANPRASRTVPFVSKAIGHPLAKYAAL 966
             T  +A  L+V GLMN Q+AI  T  GDV Y+LE NPRASRTVPFVSKA G  LAK AA 
Sbjct: 814  QTAAMANALSVVGLMNVQFAIKETADGDVIYVLEVNPRASRTVPFVSKATGIQLAKVAAR 873

Query: 967  VMSGKSLNDLGFTKEVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIA 1026
             M+G +L   G TKEV P + SVKEAV PF KF G D +LGPEM+STGEVMG+  +F  A
Sbjct: 874  CMAGDTLAQQGITKEVTPPYFSVKEAVFPFVKFPGVDTILGPEMKSTGEVMGVGKTFGEA 933

Query: 1027 FAKAQIAAGQKLPLSGTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIA 1086
            F K+Q+ AG  LP  G VFL++ +  KP    +AK    +GF + +T GTA  +   GI 
Sbjct: 934  FVKSQLGAGVTLPTQGKVFLTVKNADKPRAVAVAKELAAMGFVLCATRGTAAAISEAGIE 993

Query: 1087 VERVLKMHEGRPHAGDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSG 1146
            V+ V K+ EGRPH  DM+ NG+I M++ T         D   +R   L  +V   TT+ G
Sbjct: 994  VQLVNKVTEGRPHIVDMIKNGEIAMVINTVEERRNAIADSRAIRTSALLARVTTFTTIFG 1053

Query: 1147 ALANAEAIRSL 1157
            A A  E ++S+
Sbjct: 1054 AEAAVEGMKSM 1064


>gi|381152051|ref|ZP_09863920.1| carbamoyl-phosphate synthase, large subunit [Methylomicrobium album
            BG8]
 gi|380884023|gb|EIC29900.1| carbamoyl-phosphate synthase, large subunit [Methylomicrobium album
            BG8]
          Length = 1075

 Score = 1262 bits (3266), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 624/1085 (57%), Positives = 813/1085 (74%), Gaps = 22/1085 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ IL+LGAGPIVIGQACEFDYSGTQACKAL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIKSILLLGAGPIVIGQACEFDYSGTQACKALREEGYRVILVNSNPATIMTDPDMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
              YI P+  + VE+++EKERPDA+LPTMGGQTALN A+AL  +G L+KYGVE+IGA  +A
Sbjct: 63   AIYIEPIDWQTVEKIIEKERPDAILPTMGGQTALNCALALDANGVLKKYGVEMIGATKEA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR+LF +AM+ IG +   S   ++L+E ++   E+G +P IIRP+FT+GG+GGGI
Sbjct: 123  INKAEDRELFNRAMRKIGFEVARSKTAHSLEEALAAQEEVG-YPTIIRPSFTMGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEF  IC+ GL  S T+++L+E+S+LGWKEYE+EV+RD  DN +I+CSIEN DPMG
Sbjct: 182  AYNREEFIEICERGLDLSPTNELLIEESVLGWKEYEMEVVRDSKDNCIIVCSIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ LR+ +++++REIGV+ GGSNVQ A+NP +G ++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQILRNVAVSVLREIGVDTGGSNVQVAINPENGRLIVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITK-KTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ N+IT  KTPASFEP+IDYVVTK+PR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGYTLDELQNEITGGKTPASFEPTIDYVVTKVPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWG-CSNVKELDWD 505
            F FEKFP ++  LTTQMKSVGE MA+GRTFQES QKALR LE G SG     +++E+D  
Sbjct: 362  FTFEKFPQADDRLTTQMKSVGEVMAIGRTFQESLQKALRGLEIGISGLDEIIDMQEVDA- 420

Query: 506  WEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQS 565
             E ++  LR P P R++ +  A + GM ++ +HE S ID WFL Q ++LI  E+ L T++
Sbjct: 421  HENMQRELRHPGPHRLRYVADAFRHGMSLEAVHEASKIDPWFLAQLEDLIATEKSLSTKT 480

Query: 566  VSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANT 625
            ++ + + + + +KR+GFSD+++A    +TE EVR  R  LG+ P +KR+D+CAAEF ++T
Sbjct: 481  LATLKEGELFRLKRKGFSDQRLAKLLGATESEVRNVRHKLGIRPVFKRIDSCAAEFSSDT 540

Query: 626  PYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNS 685
             Y+YS+Y+ ECE+  + ++K++ILGGGPNRIGQGIEFDYCC H + +L+  G+ETIM+N 
Sbjct: 541  AYLYSTYEEECEARVSDREKIIILGGGPNRIGQGIEFDYCCVHAAMALREDGFETIMVNC 600

Query: 686  NPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEH 745
            NPETVSTD+DTSDRLYFEPLT+EDVL ++ +E+P+G+IVQ+GGQTPLKL+          
Sbjct: 601  NPETVSTDFDTSDRLYFEPLTLEDVLEIVHIEKPKGVIVQYGGQTPLKLA---------- 650

Query: 746  RLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEI 805
            R   A+G   V I GTSPDSID AEDRERF  +++ L ++QP    A+S   AL  AK++
Sbjct: 651  RALEAAG---VPIIGTSPDSIDLAEDRERFQKLLERLDLKQPPNATARSVEQALNAAKDL 707

Query: 806  GYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALA 865
            GYP+VVRPSYVLGGRAMEIV+ +E L  Y++ AV V  + PVL+D++L DA+E+DVDA+ 
Sbjct: 708  GYPLVVRPSYVLGGRAMEIVFNEEGLQRYMKEAVSVSNDSPVLLDRFLDDAVEMDVDAIY 767

Query: 866  DSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMN 925
            D   NV+IGG+MEHIEQAG+HSGDSAC +P   +S    D +      LA+ L V GLMN
Sbjct: 768  DG-ENVLIGGLMEHIEQAGIHSGDSACSLPPYELSMELQDRLREQVRALAEALGVVGLMN 826

Query: 926  CQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPK 985
             Q+AI    D+Y+LE NPRASRT PFVSKA G+PLAK AA  M+GKSL + G T+E IP 
Sbjct: 827  TQFAI-QGNDIYVLEVNPRASRTAPFVSKATGYPLAKIAARCMAGKSLAEQGVTEERIPD 885

Query: 986  HVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVF 1045
            + SVKEAV PF KF G D LLGPEM+STGEVMG+  +F  AFAK+Q A G  L  SG V 
Sbjct: 886  YYSVKEAVFPFVKFPGVDPLLGPEMKSTGEVMGVGKTFGEAFAKSQRATGINLNHSGKVL 945

Query: 1046 LSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVA 1105
            +S+ D  K  L  +A+   +  ++IV+T GTA  L+  GI  E V K+++GRP+  DM+ 
Sbjct: 946  ISIRDADKAKLPEVARMLTEKKYRIVATGGTAKVLQEAGIPCEVVYKVNQGRPNTVDMIK 1005

Query: 1106 NGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTVTMT 1165
            NGQIQM++ T+ G      D   +RR  L ++V   TT++GA A   A+  L +  V   
Sbjct: 1006 NGQIQMVINTTEGKKA-IADSFTMRREALQHRVNYYTTMAGAKAACYALGELDAGDV--N 1062

Query: 1166 ALQDF 1170
             LQD 
Sbjct: 1063 CLQDL 1067



 Score =  264 bits (675), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 165/454 (36%), Positives = 260/454 (57%), Gaps = 24/454 (5%)

Query: 61  VRASSAKIDS-SAELSNGAA---SSKDQKLGKR-TDLRKILILGAGPIVIGQACEFDYSG 115
           +R    +IDS +AE S+  A   S+ +++   R +D  KI+ILG GP  IGQ  EFDY  
Sbjct: 522 IRPVFKRIDSCAAEFSSDTAYLYSTYEEECEARVSDREKIIILGGGPNRIGQGIEFDYCC 581

Query: 116 TQACKALKEEGYEVILINSNPATIMTDPGLADRTYITPMTPELVEQVLEKERPDALLPTM 175
             A  AL+E+G+E I++N NP T+ TD   +DR Y  P+T E V +++  E+P  ++   
Sbjct: 582 VHAAMALREDGFETIMVNCNPETVSTDFDTSDRLYFEPLTLEDVLEIVHIEKPKGVIVQY 641

Query: 176 GGQTALNLAVALAESGALEKYGVELIGAKLDAIKKAEDRDLFKQAMKTIGVKTPPSGIGN 235
           GGQT L LA       ALE  GV +IG   D+I  AEDR+ F++ ++ + +K PP+    
Sbjct: 642 GGQTPLKLA------RALEAAGVPIIGTSPDSIDLAEDRERFQKLLERLDLKQPPNATAR 695

Query: 236 TLDECISIANEIGEFPLIIRPAFTLGGTGGGIAYNKEEFEAICKAGLAASLTSQVLVEKS 295
           ++++ ++ A ++G +PL++RP++ LGG    I +N+E  +   K  ++ S  S VL+++ 
Sbjct: 696 SVEQALNAAKDLG-YPLVVRPSYVLGGRAMEIVFNEEGLQRYMKEAVSVSNDSPVLLDRF 754

Query: 296 LLGWKEYELEVMRDLADNVVIICSIENVDPMGVHTGDSITVAPAQTLTDKEYQRLRDYSI 355
           L    E +++ + D  +NV+I   +E+++  G+H+GDS    P   L+ +   RLR+   
Sbjct: 755 LDDAVEMDVDAIYD-GENVLIGGLMEHIEQAGIHSGDSACSLPPYELSMELQDRLREQVR 813

Query: 356 AIIREIGVECGGSNVQFAVNPVDGEVMVIEMNPRVSRSSALASKATGFPIAKMAAKLSVG 415
           A+   +GV  G  N QFA+   D  + V+E+NPR SR++   SKATG+P+AK+AA+   G
Sbjct: 814 ALAEALGV-VGLMNTQFAIQGND--IYVLEVNPRASRTAPFVSKATGYPLAKIAARCMAG 870

Query: 416 YSLDQIPNDITKKTPASFEPSIDYVVTKIPRFAFEKFPGSEPLLTTQMKSVGEAMALGRT 475
            SL +    +T+      E   DY   K   F F KFPG +PLL  +MKS GE M +G+T
Sbjct: 871 KSLAE--QGVTE------ERIPDYYSVKEAVFPFVKFPGVDPLLGPEMKSTGEVMGVGKT 922

Query: 476 FQESFQKALRSLECGFSGWGCSNVKELDWDWEQL 509
           F E+F K+ R+     +  G   +   D D  +L
Sbjct: 923 FGEAFAKSQRATGINLNHSGKVLISIRDADKAKL 956


>gi|406035565|ref|ZP_11042929.1| carbamoyl-phosphate synthase large subunit [Acinetobacter parvus DSM
            16617 = CIP 108168]
          Length = 1077

 Score = 1262 bits (3265), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 623/1079 (57%), Positives = 797/1079 (73%), Gaps = 36/1079 (3%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILI+GAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIKSILIIGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPSMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+T + V Q++EKERPDA+LPTMGGQTALN A+AL  +G LEKY VELIGA  +A
Sbjct: 63   ATYIEPITWQTVAQIIEKERPDAVLPTMGGQTALNCALALDANGVLEKYNVELIGASKEA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I+KAEDR LF  AM+ IG++ P + +  +++  + I +  G FP+IIRP+FT+GG+GGGI
Sbjct: 123  IEKAEDRKLFDIAMRKIGLECPRADVAESMEHALEIQSRFG-FPVIIRPSFTMGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYNKEEF  IC+ G   S T Q+L+++SL+GWKEYE+EV+RD  DN +I+C+IEN DPMG
Sbjct: 182  AYNKEEFIEICERGFDLSPTKQLLIDESLIGWKEYEMEVVRDKNDNCIIVCAIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGVE GGSNVQF +NP DG ++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQIMRNASVAVLREIGVETGGSNVQFGINPKDGRMVVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKK-TPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT   TPASFEP+IDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKIAAKLAVGYTLDELKNDITGGITPASFEPAIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGW------GCSNVK 500
            F FEKFP +EP+LTTQMKSVGE MA+GR FQES QKALR LE G SG+      G +N K
Sbjct: 362  FNFEKFPQAEPVLTTQMKSVGEVMAIGRNFQESVQKALRGLEVGVSGFDEKIEVGTANAK 421

Query: 501  ELDWDWEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQF 560
            ++      +   L+VP P+R+  +  A + G  +D++ E + ID+WFL Q ++++  E  
Sbjct: 422  DI------ILKELKVPGPERIWYVADAFRHGFSLDDVFEATKIDRWFLIQIEDIVKTEAQ 475

Query: 561  LLTQSVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAE 620
            + T    ++  D+    KR+G SD +IA     ++K+ R++R +LGV P YKRVDTCAAE
Sbjct: 476  VKTLGFGDLNADNIRSFKRKGLSDLRIADLMGISQKQFRKQRWNLGVYPVYKRVDTCAAE 535

Query: 621  FEANTPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYET 680
            FE+ T YMYS+YD ECE+ P+ + K++++GGGPNRIGQGIEFDYCC H + +++  GYET
Sbjct: 536  FESGTAYMYSTYDEECEANPSNRDKIMVIGGGPNRIGQGIEFDYCCVHAALAMRDDGYET 595

Query: 681  IMMNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQ 740
            IM+N NPETVSTDYDTSDRLYFEP+T+EDVL ++  E+P+G+IVQ+GGQTPLKL+    +
Sbjct: 596  IMVNCNPETVSTDYDTSDRLYFEPVTLEDVLEIVRTEKPKGVIVQYGGQTPLKLA----R 651

Query: 741  YLDEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALA 800
             L+E   P         I GTSPD+ID AEDRERF  +I+ L + QP   I KS  + ++
Sbjct: 652  ALEEAGTP---------IIGTSPDAIDRAEDRERFQQMIQRLQLRQPNNSIVKSAEEGIS 702

Query: 801  IAKEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEID 860
             A ++GYP+VVRPSYVLGGRAMEIVY ++ L  YL  AV+   E PVL+D++L DA E+D
Sbjct: 703  EAAKVGYPLVVRPSYVLGGRAMEIVYNEDELKRYLREAVQASNEAPVLLDRFLDDATEVD 762

Query: 861  VDALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNV 920
            VD ++D   +VVIGGIM+HIEQAG+HSGDSAC IP  ++S    D +   T+ +AK L V
Sbjct: 763  VDCVSDG-KDVVIGGIMQHIEQAGIHSGDSACSIPPYSLSQEVQDEMRRQTVAMAKELGV 821

Query: 921  CGLMNCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTK 980
             GLMN Q+A+    D+Y+LE NPRASRTVPFVSK IG  LAK AA  M+G+SL   GFTK
Sbjct: 822  IGLMNVQFAV-KGDDIYILEVNPRASRTVPFVSKCIGESLAKVAARCMAGQSLESQGFTK 880

Query: 981  EVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQK--- 1037
            E+IP H +VKEAV PF KFQG D +LGPEM+STGEVMG+  +F  AF KA + + ++   
Sbjct: 881  EIIPTHFAVKEAVFPFAKFQGVDPILGPEMKSTGEVMGVGTTFGEAFYKAVLGSNERLPG 940

Query: 1038 LPLSGTV---FLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMH 1094
            LP  G V   FLS+ +  K H+  IAK  +  GFK+V+T GT   L+  G+  E V K+ 
Sbjct: 941  LPTEGEVKHAFLSVRESDKKHIANIAKQLIQYGFKLVATGGTYRVLKEAGLECEAVNKVT 1000

Query: 1095 EGRPHAGDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEA 1153
            EGRPH  D + NG+I ++V T+ G    Q D   +RR  L  KV   TT++GA A  +A
Sbjct: 1001 EGRPHIVDRLKNGEIHLIVNTTEGKQA-QYDSAMIRRAALQGKVYYTTTINGAEAVCQA 1058


>gi|284102430|ref|ZP_06386048.1| carbamoyl phosphate synthase large subunit [Candidatus Poribacteria
            sp. WGA-A3]
 gi|283830322|gb|EFC34555.1| carbamoyl phosphate synthase large subunit [Candidatus Poribacteria
            sp. WGA-A3]
          Length = 1100

 Score = 1262 bits (3265), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 644/1116 (57%), Positives = 810/1116 (72%), Gaps = 54/1116 (4%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KR DLR+IL++G+GPIVIGQACEFDYSGTQACK LK+EGYEV+LINSNPATIMTDP LAD
Sbjct: 3    KRNDLRRILLIGSGPIVIGQACEFDYSGTQACKTLKQEGYEVVLINSNPATIMTDPELAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
            RTYI P+T E+VE++LE+ERPDALLPTMGGQTALN+ ++L E GALEKY V+LIGA  +A
Sbjct: 63   RTYIEPITVEVVERILEEERPDALLPTMGGQTALNVTMSLQERGALEKYNVQLIGANYEA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDRD FK+AM  IG+ TP S +    ++ ++    +G FP I+RP+FTLGG GG I
Sbjct: 123  INKAEDRDAFKRAMDNIGLATPTSRLIRNREDAMNFLEIVG-FPAIVRPSFTLGGAGGNI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEFE      L  S   + L+E+SL+GWKEYELEVMRDL DNVVI+C IEN D MG
Sbjct: 182  AYNREEFERDVDWALLTSPVGEALIERSLIGWKEYELEVMRDLNDNVVIVCPIENFDAMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            +HTGDSITVAPA TLTDKEYQR+RD +I II+EIGVE GGSN+QFA+NP +GE++VIEMN
Sbjct: 242  IHTGDSITVAPAMTLTDKEYQRMRDAAIRIIQEIGVETGGSNIQFALNPENGEMIVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRF 447
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD+I NDITK T ASFEP+IDYVV KIPRF
Sbjct: 302  PRVSRSSALASKATGFPIAKIAAKLAVGYTLDEIANDITKVTQASFEPTIDYVVVKIPRF 361

Query: 448  AFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLE---CGF-SGWGCSNVKELD 503
            AFEKF GS P LTTQMKSVGEAMALGRTF+E+FQKALRSLE   CG  S  G  +    D
Sbjct: 362  AFEKFHGSNPTLTTQMKSVGEAMALGRTFKEAFQKALRSLETDRCGLISLSGLDHYLPGD 421

Query: 504  WDW-----EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVE 558
             D      E ++ ++R  +PDR   I   ++ G+  DEI   + +D WFL Q +EL+  E
Sbjct: 422  -DLSPSIPEHIRTAIRTVHPDRPWHIADGLRTGISKDEIFAATHVDPWFLDQIEELVLFE 480

Query: 559  QFLLTQ-------------SVSNMTKDD------FYEVKRRGFSDKQIAFATKSTEKEVR 599
            Q LL+Q             ++ +   +D        E KR GFSD+++A    +T   VR
Sbjct: 481  QRLLSQARACAGEKTDESVTIPDAVFNDPDGLELLKEAKRLGFSDQRLAQLLDTTAATVR 540

Query: 600  E-KRLSLGVIPS----YKRVDTCAAEFEANTPYMYSSYDFECESAPTQKKKVLILGGGPN 654
              +R+ L   PS    Y RVDTCAAEFEA TPY+YS+Y  ECE+ PT ++KV+ILGGGPN
Sbjct: 541  TLRRVHL---PSSRVTYSRVDTCAAEFEAFTPYLYSTYGRECEARPTHQEKVVILGGGPN 597

Query: 655  RIGQGIEFDYCCCHTSFSLQSAGYETIMMNSNPETVSTDYDTSDRLYFEPLTVEDVLNVI 714
            RIGQGIEFDYCC H + +L+  G ETIM+N NPETVSTDYDTSDRLYFEPL  EDVLN++
Sbjct: 598  RIGQGIEFDYCCVHATLALRELGIETIMVNCNPETVSTDYDTSDRLYFEPLVEEDVLNIM 657

Query: 715  DLERPEGIIVQFGGQTPLKLSLPIHQYLDEHRLPSASGDGLVRIWGTSPDSIDAAEDRER 774
            ++ERP G++VQFGGQTPLKL+LP+          + +G   + I GTSPD+ID AEDRER
Sbjct: 658  EVERPMGVVVQFGGQTPLKLALPL----------ARAG---IPILGTSPDAIDRAEDRER 704

Query: 775  FNAIIKELSIEQPKGGIAKSEADALAIAKEIGYPVVVRPSYVLGGRAMEIVYTDETLVTY 834
            F+A+I  L + QP+ G A+S  +A A+A  IGYPV+VRPSYVLGGRAM+IVY + +L +Y
Sbjct: 705  FSALITTLGLRQPRNGAARSGDEASAVASRIGYPVIVRPSYVLGGRAMQIVYDEPSLRSY 764

Query: 835  LENAVEVDPERPVLIDKYLSDAIEIDVDALADSCGNVVIGGIMEHIEQAGVHSGDSACMI 894
            +EN V    + P+LID+YL+DAIE+DVDA++D    VV+ GIMEH+E+AG+HSGDSAC +
Sbjct: 765  VENTVMTADQFPLLIDQYLTDAIEVDVDAVSDGA-EVVVAGIMEHVEEAGIHSGDSACSL 823

Query: 895  PTKTISSSCLDTISSWTIKLAKRLNVCGLMNCQYAITTSGDVYLLEANPRASRTVPFVSK 954
            P  +++   +D I + T+ LA+ L V GLMN Q+A+  + +V +LE NPRASRTVPFVSK
Sbjct: 824  PPHSLTPELIDRIRTQTVALARELQVVGLMNVQFAVQEN-EVSILEVNPRASRTVPFVSK 882

Query: 955  AIGHPLAKYAALVMSGKSLNDLGFTKEVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTG 1014
             IG PLAK A   M G SL DL FT+  + +H++VKE+V PF K    DVLLGPEMRSTG
Sbjct: 883  TIGVPLAKLAMKAMVGHSLRDLNFTEVPVVRHIAVKESVFPFTKLGNVDVLLGPEMRSTG 942

Query: 1015 EVMGIDMSFPIAFAKAQIAAGQKLPLSGTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTS 1074
            EVMGID  F  AFAK+Q AAG  LP  GT+ +S+ D  K     +A+    +GFK+ +T 
Sbjct: 943  EVMGIDQDFGWAFAKSQAAAGLSLPHMGTIIMSVRDGDKAGTVNVAERLQALGFKLQATR 1002

Query: 1075 GTAHFLELKGIAVERVLKMHEGRPHAGDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGL 1134
            GTA +L  +G+ VE V K+ EGRPH  D + N Q Q +V+ + G +    D L +RR  L
Sbjct: 1003 GTAAYLLERGLNVEPVNKVKEGRPHLVDHIKNRQAQ-LVVNTVGTASSHHDSLPIRREAL 1061

Query: 1135 AYKVPVITTVSGALANAEAIRSLKSNTVTMTALQDF 1170
               +P  TT+ G  A   AI +++ +++T+  LQD+
Sbjct: 1062 QQNIPYFTTIQGIQAAVTAIEAMRKSSLTIKPLQDY 1097


>gi|347541237|ref|YP_004848663.1| carbamoyl-phosphate synthase large subunit [Pseudogulbenkiania sp.
            NH8B]
 gi|345644416|dbj|BAK78249.1| carbamoyl-phosphate synthase, large subunit [Pseudogulbenkiania sp.
            NH8B]
          Length = 1070

 Score = 1262 bits (3265), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 626/1064 (58%), Positives = 801/1064 (75%), Gaps = 24/1064 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTDL+ ILI+GAGPIVIGQACEFDYSG QACKAL+EEGY+VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDLKSILIIGAGPIVIGQACEFDYSGAQACKALREEGYKVILVNSNPATIMTDPDMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  ++VE+++ KERPDA+LPTMGGQTALN A+ LA +G LEKY VELIGA  DA
Sbjct: 63   VTYIEPINWQVVEKIIAKERPDAILPTMGGQTALNCALDLARNGVLEKYKVELIGATEDA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  FK+AM  IG+  P S + +T++E ++   ++G FP +IRP+FT+GG+GGGI
Sbjct: 123  IDKAEDRGRFKEAMAKIGLSCPLSFVCHTMEESLAAQAKVG-FPTLIRPSFTMGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYNKEEF AIC+ G  AS T ++L+E+S+LGWKEYE+EV+RD  DN +IICSIEN DPMG
Sbjct: 182  AYNKEEFLAICERGFEASPTHELLIEQSVLGWKEYEMEVVRDRNDNCIIICSIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGV+ GGSNVQFA NP  GE++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQIMRNASLAVLREIGVDTGGSNVQFATNPDTGEMIVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VG++LD++ NDIT   TPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKIAAKLAVGFTLDELKNDITGGATPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            FAFEKFP ++  LTTQMKSVGE MA+GRT QES QKALR LE G +G+       +  D 
Sbjct: 362  FAFEKFPQADDRLTTQMKSVGEVMAMGRTLQESMQKALRGLETGLAGF-----DPVTTDL 416

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
            EQ+++ +  P P+R+  +  A + G+  D+I  +S ID WFL Q ++++  E+ L  + +
Sbjct: 417  EQIRHEIGTPGPERILYVADAFRAGLSRDDIFAISKIDPWFLAQIEDIVGEEKALAGRKL 476

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
              +   +   +KR+GFSD+++       +  VR +R +L + P YKRVDTCAAEF  NT 
Sbjct: 477  DELDYAELRRLKRKGFSDRRLGALLGVDQGAVRARRWALNLRPVYKRVDTCAAEFATNTA 536

Query: 627  YMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSN 686
            YMYSSY+ ECES PT +KK+++LGGGPNRIGQGIEFDYCC H + +L+ +G+ETIM+N N
Sbjct: 537  YMYSSYEEECESRPTDRKKIMVLGGGPNRIGQGIEFDYCCVHAALALRESGFETIMVNCN 596

Query: 687  PETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHR 746
            PETVSTDYDTSDRLYFEPLT+EDVL +  +E+P G+IVQ+GGQTPLKL+          R
Sbjct: 597  PETVSTDYDTSDRLYFEPLTLEDVLEICHVEKPFGVIVQYGGQTPLKLA----------R 646

Query: 747  LPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEIG 806
               A+G   V I GT+PD ID AEDRERF  +++EL ++QP    A++ ADA+ +A+EIG
Sbjct: 647  ALEANG---VPIIGTTPDMIDCAEDRERFQKMLQELGLKQPPNRTARTPADAMRLAEEIG 703

Query: 807  YPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALAD 866
            YP+VVRPSYVLGGRAMEIV+    L  Y+  AV+V  + PVL+D++L+DAIE+DVDA++D
Sbjct: 704  YPLVVRPSYVLGGRAMEIVHEPADLERYMREAVKVSNDSPVLLDRFLNDAIEVDVDAVSD 763

Query: 867  SCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNC 926
                VVIGGIM+H+EQAGVHSGDSAC +P  ++  +  D I   T+ +AK LNV GLMN 
Sbjct: 764  G-ELVVIGGIMQHVEQAGVHSGDSACSLPPYSLFPAVQDEIRRQTVAMAKALNVVGLMNV 822

Query: 927  QYAITTSGD-VYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPK 985
            Q+AI   GD +Y+LE NPRASRTVPFVSK  G PLAK AA  M+G SL + GFTKEV+P 
Sbjct: 823  QFAI--QGDTIYVLEVNPRASRTVPFVSKVTGAPLAKIAARCMAGISLTEQGFTKEVVPP 880

Query: 986  HVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVF 1045
            + +VKEAV PF KF G D +LGPEM+STGEVMG+  SF  AF KA++AAG +LP +G VF
Sbjct: 881  YYAVKEAVFPFIKFPGVDTILGPEMKSTGEVMGVGRSFAEAFIKAELAAGDRLPKAGKVF 940

Query: 1046 LSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVA 1105
            LS+ +  K     +A+  + +GF++V+T GTA  ++  GI V+ + K++EGRPH  DM+ 
Sbjct: 941  LSVRNSDKAGSVEVAREMVRLGFEVVATRGTARGIQEAGIPVQLINKVNEGRPHIVDMIK 1000

Query: 1106 NGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALA 1149
            NG+I ++  T         D   +RR  L  +VP  TT++GA A
Sbjct: 1001 NGEISLVFNTVDEKRQAIQDSHSIRRSALQMRVPQYTTLAGAKA 1044



 Score =  242 bits (618), Expect = 9e-61,   Method: Compositional matrix adjust.
 Identities = 159/447 (35%), Positives = 241/447 (53%), Gaps = 32/447 (7%)

Query: 42  GSLSLRSWPPQLTRYSRSRVRASSAKIDS-SAELSNGAA---SSKDQKLGKR-TDLRKIL 96
           G++  R W   L        R    ++D+ +AE +   A   SS +++   R TD +KI+
Sbjct: 506 GAVRARRWALNL--------RPVYKRVDTCAAEFATNTAYMYSSYEEECESRPTDRKKIM 557

Query: 97  ILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLADRTYITPMTP 156
           +LG GP  IGQ  EFDY    A  AL+E G+E I++N NP T+ TD   +DR Y  P+T 
Sbjct: 558 VLGGGPNRIGQGIEFDYCCVHAALALRESGFETIMVNCNPETVSTDYDTSDRLYFEPLTL 617

Query: 157 ELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDAIKKAEDRDL 216
           E V ++   E+P  ++   GGQT L LA       ALE  GV +IG   D I  AEDR+ 
Sbjct: 618 EDVLEICHVEKPFGVIVQYGGQTPLKLA------RALEANGVPIIGTTPDMIDCAEDRER 671

Query: 217 FKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGIAYNKEEFEA 276
           F++ ++ +G+K PP+    T  + + +A EIG +PL++RP++ LGG    I +   + E 
Sbjct: 672 FQKMLQELGLKQPPNRTARTPADAMRLAEEIG-YPLVVRPSYVLGGRAMEIVHEPADLER 730

Query: 277 ICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMGVHTGDSITV 336
             +  +  S  S VL+++ L    E +++ + D  + VVI   +++V+  GVH+GDS   
Sbjct: 731 YMREAVKVSNDSPVLLDRFLNDAIEVDVDAVSD-GELVVIGGIMQHVEQAGVHSGDSACS 789

Query: 337 APAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMNPRVSRSSAL 396
            P  +L       +R  ++A+ + + V  G  NVQFA+      + V+E+NPR SR+   
Sbjct: 790 LPPYSLFPAVQDEIRRQTVAMAKALNV-VGLMNVQFAIQ--GDTIYVLEVNPRASRTVPF 846

Query: 397 ASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRFAFEKFPGSE 456
            SK TG P+AK+AA+   G SL +     TK+          Y   K   F F KFPG +
Sbjct: 847 VSKVTGAPLAKIAARCMAGISLTE--QGFTKEVVPP------YYAVKEAVFPFIKFPGVD 898

Query: 457 PLLTTQMKSVGEAMALGRTFQESFQKA 483
            +L  +MKS GE M +GR+F E+F KA
Sbjct: 899 TILGPEMKSTGEVMGVGRSFAEAFIKA 925


>gi|58427104|gb|AAW76141.1| carbamoyl-phosphate synthase large chain [Xanthomonas oryzae pv.
            oryzae KACC 10331]
          Length = 1090

 Score = 1262 bits (3265), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 630/1068 (58%), Positives = 798/1068 (74%), Gaps = 21/1068 (1%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTDL+ ILI+GAGPIVIGQACEFDYSG QACKAL++EGY V+L+NSNPATIMTDP +AD
Sbjct: 13   KRTDLKTILIIGAGPIVIGQACEFDYSGAQACKALRDEGYRVVLVNSNPATIMTDPNMAD 72

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
              YI P+  + VE+++ KE+PDALLPTMGGQTALN A+ LA+ G LEKY VELIGAK +A
Sbjct: 73   AVYIEPINWQTVEKIISKEKPDALLPTMGGQTALNCALDLADHGVLEKYNVELIGAKREA 132

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I+ AEDR+LF+ AM  IG+  P + + +TL+E + I   +G +P IIRP+FTLGG+GGGI
Sbjct: 133  IRMAEDRELFRVAMGEIGLDCPKAAVAHTLEEALEIQTRVG-YPTIIRPSFTLGGSGGGI 191

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EE   I   GL  S T++VLVE+S+LGWKE+E+EV+RD ADN +I+C+IEN+DPMG
Sbjct: 192  AYNREELIEIVGRGLELSPTTEVLVEESVLGWKEFEMEVVRDTADNCIIVCAIENLDPMG 251

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQRLRD SIA++R+IGV+ GGSNVQF ++P  G V+VIEMN
Sbjct: 252  VHTGDSITVAPAQTLTDKEYQRLRDASIAVLRKIGVDTGGSNVQFGISPTTGRVVVIEMN 311

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKK-TPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ N+IT   TPASFEPSIDYVVTKIPR
Sbjct: 312  PRVSRSSALASKATGFPIAKVAAKLAVGYTLDELRNEITGGLTPASFEPSIDYVVTKIPR 371

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVK-ELDWD 505
            FAFEKFP ++  LTTQMKSVGE MA+GRTFQES QKALR LE G  G   + +    + D
Sbjct: 372  FAFEKFPQADARLTTQMKSVGEVMAMGRTFQESLQKALRGLETGKIGLDPTGLDLSSEDD 431

Query: 506  WEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQS 565
               LK  L+ P P+R+  +  A + GM V E++ LSFID WFL Q +ELI  EQ L    
Sbjct: 432  IAALKRELKAPGPERLFYVADAFRAGMTVAEVYALSFIDPWFLDQIEELISHEQQLADDG 491

Query: 566  VSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANT 625
            ++ +       +K  GFSD ++A    S E+ VR  R +L V P YKRVD+CAAEF  +T
Sbjct: 492  MAALDAARLRMLKCAGFSDARLAELIGSNEESVRTLRRALEVRPVYKRVDSCAAEFATST 551

Query: 626  PYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNS 685
             YMYS+Y+ ECE+ PT + K++ILGGGPNRIGQGIEFDYCC H + +L+  G+ETIM+N 
Sbjct: 552  AYMYSTYEDECEALPTDRDKIMILGGGPNRIGQGIEFDYCCVHAALALRDDGFETIMVNC 611

Query: 686  NPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEH 745
            NPETVSTDYDTSDRLYFEPLT+EDVL +++LE+P+G+IVQ+GGQTPLKL+          
Sbjct: 612  NPETVSTDYDTSDRLYFEPLTLEDVLEIVELEKPKGVIVQYGGQTPLKLA---------- 661

Query: 746  RLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEI 805
            R   A+G   V + GTSPDSID AEDRERF  ++  L ++QP   IA++  +AL +A+EI
Sbjct: 662  RALEANG---VPVIGTSPDSIDLAEDRERFQQLVDTLGLKQPPNRIARNAEEALVLAREI 718

Query: 806  GYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALA 865
            GYP+VVRPSYVLGGRAMEIVY +  L  Y+ +AV+V  + PVL+D++L +A+E+DVD +A
Sbjct: 719  GYPLVVRPSYVLGGRAMEIVYGESDLARYVRDAVKVSNDSPVLLDRFLDNAVEVDVDIIA 778

Query: 866  DSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMN 925
            D  GNV+IGG+MEHIE+AGVHSGDS+C +P  ++S      +    + LA+ LNV GLMN
Sbjct: 779  DKDGNVLIGGVMEHIEEAGVHSGDSSCSLPPYSLSPQTQAELRRQVVMLAEGLNVVGLMN 838

Query: 926  CQYAITT--SGD--VYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKE 981
             Q+A+    +GD  VYLLE NPRASRTVPFVSKAIG PLAK AA  M+GK+L + G  KE
Sbjct: 839  TQFAVQVNEAGDDIVYLLEVNPRASRTVPFVSKAIGMPLAKIAARCMAGKTLAEQGAIKE 898

Query: 982  VIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLS 1041
            ++P + SVKEA+ PF KFQG D +LGPEMRSTGEVMG+  SF  AFA+AQ A G K P  
Sbjct: 899  IVPDYYSVKEAIFPFAKFQGVDPILGPEMRSTGEVMGVGRSFSAAFARAQEAGGIKAPPV 958

Query: 1042 GTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAG 1101
            G  F+S+ D  K  +  +A+A ++ GF +V+T GT  +L+  G++ E V K+ EGRPH  
Sbjct: 959  GKAFVSVRDPDKQRVLPVAQALVERGFTLVATRGTGAWLQQNGLSCEIVNKVAEGRPHIV 1018

Query: 1102 DMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALA 1149
            D + NG+I  +V T+ G +    D   +RR  L ++V   TTV+GA A
Sbjct: 1019 DSIKNGEIVYIVNTTEGRAAIS-DSFSIRREALQHRVTYSTTVAGAKA 1065


>gi|255020831|ref|ZP_05292887.1| Carbamoyl-phosphate synthase large chain [Acidithiobacillus caldus
            ATCC 51756]
 gi|340781398|ref|YP_004748005.1| carbamoyl-phosphate synthase large chain [Acidithiobacillus caldus
            SM-1]
 gi|254969622|gb|EET27128.1| Carbamoyl-phosphate synthase large chain [Acidithiobacillus caldus
            ATCC 51756]
 gi|340555551|gb|AEK57305.1| Carbamoyl-phosphate synthase large chain [Acidithiobacillus caldus
            SM-1]
          Length = 1076

 Score = 1262 bits (3265), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 626/1089 (57%), Positives = 805/1089 (73%), Gaps = 25/1089 (2%)

Query: 86   LGKRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGL 145
            + KR D+  +L++GAGPIVIGQACEFDYSG QACKAL+EEG  VIL+NSNPATIMTDP  
Sbjct: 1    MAKRKDIHSVLLIGAGPIVIGQACEFDYSGVQACKALREEGCRVILVNSNPATIMTDPDT 60

Query: 146  ADRTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKL 205
            AD  YI P+  + V +++E+ERPDALLPTMGGQTALN A+ L   G LE++GVELIGA +
Sbjct: 61   ADAVYIEPVEWQTVAKIIERERPDALLPTMGGQTALNCALDLHREGILERFGVELIGASI 120

Query: 206  DAIKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGG 265
            +AI++AEDR  FK+AM+ IG++   S   +TLDE  +IA ++G FP+IIRP++TLGG+GG
Sbjct: 121  EAIQEAEDRGRFKRAMEEIGLEVARSAFAHTLDEARAIAEDVG-FPVIIRPSYTLGGSGG 179

Query: 266  GIAYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDP 325
            GIAYN+EEFE I   GL AS + ++L+E+S++GWKE+E+EV+RD ADN +I+CSIEN+DP
Sbjct: 180  GIAYNREEFEDIAARGLEASPSHEILIEESVIGWKEFEMEVVRDRADNCIIVCSIENLDP 239

Query: 326  MGVHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIE 385
            MG+HTGDSITVAPAQTLTD+EYQ +RD S+A++R IGV+ GGSNVQFA+NP +G ++VIE
Sbjct: 240  MGIHTGDSITVAPAQTLTDREYQVMRDASLAVLRRIGVDTGGSNVQFALNPRNGRMLVIE 299

Query: 386  MNPRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIP 445
            MNPRVSRSSALASKATGFPIAK+AAKL++GY+LD++ NDIT+ TPASFEP+IDYVVTKIP
Sbjct: 300  MNPRVSRSSALASKATGFPIAKIAAKLALGYTLDELRNDITRATPASFEPTIDYVVTKIP 359

Query: 446  RFAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWD 505
            RFAFEKFP ++  LTTQMKSVGE MA+GR+FQES QKALR LE G  G      ++LD  
Sbjct: 360  RFAFEKFPEADSHLTTQMKSVGEVMAMGRSFQESLQKALRGLETGVYGLD----EKLDLR 415

Query: 506  ----WEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFL 561
                  +L+  LR   P+R+  I  A ++G  ++++  L+ ID WFL Q  E++  E+ L
Sbjct: 416  EPEALPRLEQELRNAGPERLWYIADAFRRGWTLEQVQALTHIDPWFLEQIAEIVVTEESL 475

Query: 562  LTQSVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEF 621
                ++++ ++    +KR GFSD+++A      E  +RE R  LG+ P YKRVDTCAAEF
Sbjct: 476  RGLPLASLDRERLLGLKRMGFSDRRLARLLGCRESLLREHRHKLGLRPVYKRVDTCAAEF 535

Query: 622  EANTPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETI 681
             + TPY+YSSY+ ECE+AP+ ++K++ILGGGPNRIGQGIEFDYCC H + +L++ G+ETI
Sbjct: 536  PSPTPYLYSSYEAECEAAPSDRRKIVILGGGPNRIGQGIEFDYCCVHAAMALRTDGFETI 595

Query: 682  MMNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQY 741
            M+N NPETVSTDYDTSDRLYFEPLT+EDVL ++ LE+PEG+IVQFGGQTPLKL+      
Sbjct: 596  MVNCNPETVSTDYDTSDRLYFEPLTLEDVLEIVALEKPEGVIVQFGGQTPLKLA------ 649

Query: 742  LDEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAI 801
               + L SA     V I GTSPDSID AEDRERF  +I  L + QP+  IA+S  +AL +
Sbjct: 650  ---NDLESAG----VPIIGTSPDSIDLAEDRERFQQLITRLGLRQPENAIARSADEALQL 702

Query: 802  AKEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDV 861
            A+++GYP+VVRPSYVLGGRAM IVY++E L  Y+  AV V  ++P+L+D++L+DA+E+DV
Sbjct: 703  ARQLGYPLVVRPSYVLGGRAMRIVYSEEDLARYMVEAVRVSEDQPILLDRFLNDALEVDV 762

Query: 862  DALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVC 921
            DA+AD    VV+ GIMEHIEQAGVHSGDSAC +P  +++    D +      L + L V 
Sbjct: 763  DAVADG-KQVVVAGIMEHIEQAGVHSGDSACCLPPYSLAQPIQDELRRQAECLGQALGVI 821

Query: 922  GLMNCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKE 981
            GLMNCQ+A+     +Y+LE NPRASRTVPFVSKA G PLAK AA  MSG+SL D G +  
Sbjct: 822  GLMNCQFAVQED-RIYVLEVNPRASRTVPFVSKACGVPLAKIAARAMSGQSLADQGVSAI 880

Query: 982  VIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLS 1041
                H SVKEAV PF KF G DVLLGPEM+STGEVMGI  SF  AF KAQIAAG+  P S
Sbjct: 881  AAGPHFSVKEAVFPFIKFPGVDVLLGPEMKSTGEVMGIGKSFGEAFLKAQIAAGEHFPRS 940

Query: 1042 GTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAG 1101
            GTVFLS+ D  KP   RIA+    +GF +++T GTA  L+ +GI   RV K+ EGRPH  
Sbjct: 941  GTVFLSVRDADKPVAARIARDLRALGFSLLATHGTASHLQAQGIDCARVNKVTEGRPHIV 1000

Query: 1102 DMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNT 1161
            D + NG++Q ++I +  +     D   +RR  L   +   TT++GA A   A+R L    
Sbjct: 1001 DAIKNGKVQ-IIINTVDERQSVRDSYSIRRAALQMGLTYYTTLAGASAGTAALRVLLQGD 1059

Query: 1162 VTMTALQDF 1170
             T+  LQD 
Sbjct: 1060 WTVEKLQDL 1068


>gi|161898980|ref|YP_201526.2| carbamoyl phosphate synthase large subunit [Xanthomonas oryzae pv.
            oryzae KACC 10331]
 gi|188575984|ref|YP_001912913.1| carbamoyl phosphate synthase large subunit [Xanthomonas oryzae pv.
            oryzae PXO99A]
 gi|188520436|gb|ACD58381.1| carbamoyl-phosphate synthase, large subunit [Xanthomonas oryzae pv.
            oryzae PXO99A]
          Length = 1080

 Score = 1261 bits (3264), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 630/1068 (58%), Positives = 798/1068 (74%), Gaps = 21/1068 (1%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTDL+ ILI+GAGPIVIGQACEFDYSG QACKAL++EGY V+L+NSNPATIMTDP +AD
Sbjct: 3    KRTDLKTILIIGAGPIVIGQACEFDYSGAQACKALRDEGYRVVLVNSNPATIMTDPNMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
              YI P+  + VE+++ KE+PDALLPTMGGQTALN A+ LA+ G LEKY VELIGAK +A
Sbjct: 63   AVYIEPINWQTVEKIISKEKPDALLPTMGGQTALNCALDLADHGVLEKYNVELIGAKREA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I+ AEDR+LF+ AM  IG+  P + + +TL+E + I   +G +P IIRP+FTLGG+GGGI
Sbjct: 123  IRMAEDRELFRVAMGEIGLDCPKAAVAHTLEEALEIQTRVG-YPTIIRPSFTLGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EE   I   GL  S T++VLVE+S+LGWKE+E+EV+RD ADN +I+C+IEN+DPMG
Sbjct: 182  AYNREELIEIVGRGLELSPTTEVLVEESVLGWKEFEMEVVRDTADNCIIVCAIENLDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQRLRD SIA++R+IGV+ GGSNVQF ++P  G V+VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQRLRDASIAVLRKIGVDTGGSNVQFGISPTTGRVVVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKK-TPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ N+IT   TPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGYTLDELRNEITGGLTPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVK-ELDWD 505
            FAFEKFP ++  LTTQMKSVGE MA+GRTFQES QKALR LE G  G   + +    + D
Sbjct: 362  FAFEKFPQADARLTTQMKSVGEVMAMGRTFQESLQKALRGLETGKIGLDPTGLDLSSEDD 421

Query: 506  WEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQS 565
               LK  L+ P P+R+  +  A + GM V E++ LSFID WFL Q +ELI  EQ L    
Sbjct: 422  IAALKRELKAPGPERLFYVADAFRAGMTVAEVYALSFIDPWFLDQIEELISHEQQLADDG 481

Query: 566  VSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANT 625
            ++ +       +K  GFSD ++A    S E+ VR  R +L V P YKRVD+CAAEF  +T
Sbjct: 482  MAALDAARLRMLKCAGFSDARLAELIGSNEESVRTLRRALEVRPVYKRVDSCAAEFATST 541

Query: 626  PYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNS 685
             YMYS+Y+ ECE+ PT + K++ILGGGPNRIGQGIEFDYCC H + +L+  G+ETIM+N 
Sbjct: 542  AYMYSTYEDECEALPTDRDKIMILGGGPNRIGQGIEFDYCCVHAALALRDDGFETIMVNC 601

Query: 686  NPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEH 745
            NPETVSTDYDTSDRLYFEPLT+EDVL +++LE+P+G+IVQ+GGQTPLKL+          
Sbjct: 602  NPETVSTDYDTSDRLYFEPLTLEDVLEIVELEKPKGVIVQYGGQTPLKLA---------- 651

Query: 746  RLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEI 805
            R   A+G   V + GTSPDSID AEDRERF  ++  L ++QP   IA++  +AL +A+EI
Sbjct: 652  RALEANG---VPVIGTSPDSIDLAEDRERFQQLVDTLGLKQPPNRIARNAEEALVLAREI 708

Query: 806  GYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALA 865
            GYP+VVRPSYVLGGRAMEIVY +  L  Y+ +AV+V  + PVL+D++L +A+E+DVD +A
Sbjct: 709  GYPLVVRPSYVLGGRAMEIVYGESDLARYVRDAVKVSNDSPVLLDRFLDNAVEVDVDIIA 768

Query: 866  DSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMN 925
            D  GNV+IGG+MEHIE+AGVHSGDS+C +P  ++S      +    + LA+ LNV GLMN
Sbjct: 769  DKDGNVLIGGVMEHIEEAGVHSGDSSCSLPPYSLSPQTQAELRRQVVMLAEGLNVVGLMN 828

Query: 926  CQYAITT--SGD--VYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKE 981
             Q+A+    +GD  VYLLE NPRASRTVPFVSKAIG PLAK AA  M+GK+L + G  KE
Sbjct: 829  TQFAVQVNEAGDDIVYLLEVNPRASRTVPFVSKAIGMPLAKIAARCMAGKTLAEQGAIKE 888

Query: 982  VIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLS 1041
            ++P + SVKEA+ PF KFQG D +LGPEMRSTGEVMG+  SF  AFA+AQ A G K P  
Sbjct: 889  IVPDYYSVKEAIFPFAKFQGVDPILGPEMRSTGEVMGVGRSFSAAFARAQEAGGIKAPPV 948

Query: 1042 GTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAG 1101
            G  F+S+ D  K  +  +A+A ++ GF +V+T GT  +L+  G++ E V K+ EGRPH  
Sbjct: 949  GKAFVSVRDPDKQRVLPVAQALVERGFTLVATRGTGAWLQQNGLSCEIVNKVAEGRPHIV 1008

Query: 1102 DMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALA 1149
            D + NG+I  +V T+ G +    D   +RR  L ++V   TTV+GA A
Sbjct: 1009 DSIKNGEIVYIVNTTEGRAAIS-DSFSIRREALQHRVTYSTTVAGAKA 1055


>gi|78047465|ref|YP_363640.1| carbamoyl phosphate synthase large subunit [Xanthomonas campestris
            pv. vesicatoria str. 85-10]
 gi|78035895|emb|CAJ23586.1| carbamoyl-phosphate synthase large chain [Xanthomonas campestris pv.
            vesicatoria str. 85-10]
          Length = 1080

 Score = 1261 bits (3264), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 630/1076 (58%), Positives = 803/1076 (74%), Gaps = 27/1076 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTDL+ ILI+GAGPIVIGQACEFDYSG QACKAL++EGY V+L+NSNPATIMTDP +AD
Sbjct: 3    KRTDLKTILIIGAGPIVIGQACEFDYSGAQACKALRDEGYRVVLVNSNPATIMTDPNMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
              YI P+  + VE+++ KE+PDALLPTMGGQTALN A+ LA+ G LEKY VELIGAK +A
Sbjct: 63   AVYIEPINWQTVEKIIAKEKPDALLPTMGGQTALNCALDLADHGVLEKYNVELIGAKREA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I+ AEDR+LF+ AM  IG+  P + + +TL+E + I   +G +P IIRP+FTLGG+GGGI
Sbjct: 123  IRMAEDRELFRVAMGEIGLDCPTAAVAHTLEEALEIQTRVG-YPTIIRPSFTLGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EE   I   GL  S T++VLVE+S+LGWKE+E+EV+RD ADN +I+C+IEN+DPMG
Sbjct: 182  AYNREELIEIVGRGLELSPTTEVLVEESVLGWKEFEMEVVRDTADNCIIVCAIENLDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQRLRD SIA++R+IGV+ GGSNVQF ++P  G V+VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQRLRDASIAVLRKIGVDTGGSNVQFGISPTTGRVVVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKK-TPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ N+IT   TPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGYTLDELKNEITGGLTPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            FAFEKFP ++  LTTQMKSVGE MA+GRTFQES QKALR LE G  G   +    LD   
Sbjct: 362  FAFEKFPQADARLTTQMKSVGEVMAMGRTFQESLQKALRGLETGKIGLDPTG---LDLSS 418

Query: 507  EQ----LKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLL 562
            E     LK  L+ P P+R+  +  A + GM V +++ LSFID WFL Q +E+I  EQ L 
Sbjct: 419  EDGIATLKRELKAPGPERLFYVADAFRAGMTVADVYALSFIDPWFLDQIEEIISHEQQLA 478

Query: 563  TQSVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFE 622
               ++ +       +KR GFSD ++A    S E+ VR  R +L V P YKRVD+CAAEF 
Sbjct: 479  DDGMAALDAPRLRMLKRAGFSDARMAQLIGSNEESVRTLRRALKVRPVYKRVDSCAAEFA 538

Query: 623  ANTPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIM 682
             +T Y+YS+Y+ ECE+ PT + K++ILGGGPNRIGQGIEFDYCC H + +L+  G+ETIM
Sbjct: 539  TSTAYLYSTYEDECEALPTDRDKIMILGGGPNRIGQGIEFDYCCVHAALALRDDGFETIM 598

Query: 683  MNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYL 742
            +N NPETVSTDY TSDRLYFEPLT+EDVL +++LE+P+G+IVQ+GGQTPLKL+       
Sbjct: 599  VNCNPETVSTDYGTSDRLYFEPLTLEDVLEIVELEKPKGVIVQYGGQTPLKLA------- 651

Query: 743  DEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIA 802
               R   A+G   V + GTSPDSID AEDRERF  ++ +L ++QP   IA++  +AL +A
Sbjct: 652  ---RALEANG---VPVIGTSPDSIDLAEDRERFQQLVDKLGLKQPPNRIARNAEEALVLA 705

Query: 803  KEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVD 862
            +EIGYP+VVRPSYVLGGRAMEIVY +  L  Y+ +AV+V  + PVL+D++L +A+E+DVD
Sbjct: 706  REIGYPLVVRPSYVLGGRAMEIVYGESDLARYVRDAVKVSNDSPVLLDRFLDNAVEVDVD 765

Query: 863  ALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCG 922
             +AD  GNV+IGG+MEHIE+AGVHSGDS+C +P  ++S      +    + LA+ LNV G
Sbjct: 766  IIADKDGNVLIGGVMEHIEEAGVHSGDSSCSLPPYSLSPQTQAELRRQVVMLAEGLNVVG 825

Query: 923  LMNCQYAITT--SGD--VYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGF 978
            LMN Q+A+    +GD  VYLLE NPRASRTVPFVSKAIG PLAK AA  M+GK+L + G 
Sbjct: 826  LMNTQFAVQVNEAGDDIVYLLEVNPRASRTVPFVSKAIGMPLAKIAARCMAGKTLAEQGA 885

Query: 979  TKEVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKL 1038
            TKE++P + SVKEA+ PF KFQG D +LGPEMRSTGEVMG+  SF  AFA+AQ A G K 
Sbjct: 886  TKEIVPDYYSVKEAIFPFAKFQGVDPILGPEMRSTGEVMGVGRSFSAAFARAQEAGGIKA 945

Query: 1039 PLSGTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRP 1098
            P  G  F+S+ D  K  +  +A+A ++ GF +V+T GT  +L+  G++ E V K+ EGRP
Sbjct: 946  PPVGKAFVSVRDPDKQRVLPVAQALVERGFTLVATRGTGAWLQQNGLSCEIVNKVAEGRP 1005

Query: 1099 HAGDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAI 1154
            H  D + NG+I  +V T+ G +    D   +RR  L ++V   TTV+GA A  +++
Sbjct: 1006 HIVDSIKNGEIVYIVNTTEGRAAIS-DSFSIRREALQHRVTYSTTVAGAKALVQSL 1060


>gi|365855649|ref|ZP_09395692.1| carbamoyl-phosphate synthase, large subunit [Acetobacteraceae
            bacterium AT-5844]
 gi|363718957|gb|EHM02278.1| carbamoyl-phosphate synthase, large subunit [Acetobacteraceae
            bacterium AT-5844]
          Length = 1081

 Score = 1261 bits (3264), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 628/1093 (57%), Positives = 800/1093 (73%), Gaps = 27/1093 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILI+GAGPIVIGQACEFDYSG QACKAL+ EGY VIL+NSNPATIMTDPGLAD
Sbjct: 3    KRTDIKSILIIGAGPIVIGQACEFDYSGAQACKALRAEGYRVILVNSNPATIMTDPGLAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+T ++VE+++ KERPDALLPTMGGQTALN A+ LAE+G LEKYG ELIGAK + 
Sbjct: 63   ATYIEPITVDMVEKIIAKERPDALLPTMGGQTALNTALKLAEAGVLEKYGCELIGAKAEV 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  F+ AM  IG+++P S I +T++E  +  +E+ + P +IRP+FTLGGTGGGI
Sbjct: 123  IDKAEDRLKFRDAMTKIGIESPRSAIAHTMEEARAGLDEV-KLPCVIRPSFTLGGTGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYNKEEFE I  AGLAAS+TS+VL+E+S+LGWKE+E+EV+RD ADN +I+CSIEN+DPMG
Sbjct: 182  AYNKEEFEQIVSAGLAASMTSEVLIEESVLGWKEFEMEVVRDSADNCIIVCSIENLDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDS+TVAPA TLTDKEYQR+RD SIA +REIGV+ GGSNVQF +NP DG ++VIEMN
Sbjct: 242  VHTGDSVTVAPALTLTDKEYQRMRDASIACLREIGVDTGGSNVQFGINPADGRMVVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRF 447
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT  TPASFEP+IDYVV KIPRF
Sbjct: 302  PRVSRSSALASKATGFPIAKIAAKLAVGYTLDELKNDITMVTPASFEPTIDYVVVKIPRF 361

Query: 448  AFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDWE 507
             FEKFPG+   LTT MKSVGEAMA+GR+F E+ QK LRSLE G SG      +  D   E
Sbjct: 362  TFEKFPGTPATLTTSMKSVGEAMAIGRSFNEALQKGLRSLETGLSGLDDIG-QPGDGSKE 420

Query: 508  QLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSVS 567
                SL  P PDR+  +  A + G+ V+EIH     + WFL + ++++  E+ +    + 
Sbjct: 421  AHIASLATPKPDRVLNVAQAFRAGLTVEEIHAACKFEPWFLREIEKIVKAEEGVRANGLP 480

Query: 568  NMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTPY 627
                +    +K  GFSDK++      TE EV   R SL V+P +KR+DTCA EF ++TPY
Sbjct: 481  -ADANGMRRLKAMGFSDKRLGALAGKTEAEVSALRQSLSVLPVFKRIDTCAGEFASDTPY 539

Query: 628  MYSSYDF-----ECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIM 682
            MYS+Y+      +CES PT KKKV+ILGGGPNRIGQGIEFDYCC H  ++L+ AG+ETIM
Sbjct: 540  MYSTYEGGFGAPQCESRPTDKKKVIILGGGPNRIGQGIEFDYCCVHACYALREAGFETIM 599

Query: 683  MNSNPETVSTDYDTSDRLYFEPLTVEDVLNVI--DLERPE--GIIVQFGGQTPLKLSLPI 738
            +N NPETVSTDYDTSDRLYFEPLT EDV+++I  + ER E  G IVQ+GGQTPLKLS  +
Sbjct: 600  VNCNPETVSTDYDTSDRLYFEPLTAEDVISLIRKEQERGEVLGCIVQYGGQTPLKLSQAL 659

Query: 739  HQYLDEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADA 798
            H+               + I GTS ++ID AEDRERF  ++K L ++QP+    +    A
Sbjct: 660  HK-------------AGIPILGTSAEAIDIAEDRERFQQLLKGLGLKQPQNDTVRDLDAA 706

Query: 799  LAIAKEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIE 858
            +  A+ IGYPVVVRPSYVLGGRAMEI Y  E L+ + + AV+V  E P+LID+YL DAIE
Sbjct: 707  VVAAERIGYPVVVRPSYVLGGRAMEIAYNKEQLLRFGQEAVKVSGENPILIDQYLQDAIE 766

Query: 859  IDVDALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRL 918
            +DVD +AD  G+V + G+MEHIE+AG+HSGDSAC +P  ++  + +  + + T  +AK L
Sbjct: 767  VDVDCIADENGSVYVAGVMEHIEEAGIHSGDSACSLPPYSLPPATITELKAETEAMAKAL 826

Query: 919  NVCGLMNCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGF 978
             V GLMN QYA+   G++++LE NPRASRTVPFV+KA G P+AK  A VM+G  +++   
Sbjct: 827  KVKGLMNVQYAV-KDGEIFVLEVNPRASRTVPFVAKATGVPVAKIGARVMAGAKVSEFKL 885

Query: 979  TKEVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKL 1038
              E I +HV+VKEAV PF +F   DV+LGPEM+STGEVMG+D SF  AFAK+Q+ AG KL
Sbjct: 886  DDEAISRHVAVKEAVFPFNRFPNVDVILGPEMKSTGEVMGLDTSFERAFAKSQLGAGVKL 945

Query: 1039 PLSGTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRP 1098
            P+SG VF+S+ D  K    ++ +   D+GF +V+T GTA  L   G+ V  V K+ EGRP
Sbjct: 946  PVSGGVFISVKDGDKNTAVQLGRRLADMGFALVATRGTAAKLREAGLEVTVVNKVMEGRP 1005

Query: 1099 HAGDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLK 1158
            H  D ++NG+IQ +VI ++G      D   +RR  L + VP  TT+SGA A   AI +LK
Sbjct: 1006 HCVDAISNGEIQ-IVINTTGSGAAVADSFDIRRSALTHGVPHYTTISGARAVVHAIAALK 1064

Query: 1159 SNTVTMTALQDFF 1171
            + T+ +  +Q +F
Sbjct: 1065 AGTLDVAPVQAYF 1077


>gi|381171592|ref|ZP_09880735.1| carbamoyl-phosphate synthase, large subunit [Xanthomonas citri pv.
            mangiferaeindicae LMG 941]
 gi|418518197|ref|ZP_13084348.1| carbamoyl phosphate synthase large subunit [Xanthomonas axonopodis
            pv. malvacearum str. GSPB1386]
 gi|418522615|ref|ZP_13088648.1| carbamoyl phosphate synthase large subunit [Xanthomonas axonopodis
            pv. malvacearum str. GSPB2388]
 gi|380687965|emb|CCG37222.1| carbamoyl-phosphate synthase, large subunit [Xanthomonas citri pv.
            mangiferaeindicae LMG 941]
 gi|410700916|gb|EKQ59452.1| carbamoyl phosphate synthase large subunit [Xanthomonas axonopodis
            pv. malvacearum str. GSPB2388]
 gi|410704792|gb|EKQ63273.1| carbamoyl phosphate synthase large subunit [Xanthomonas axonopodis
            pv. malvacearum str. GSPB1386]
          Length = 1080

 Score = 1261 bits (3264), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 627/1073 (58%), Positives = 803/1073 (74%), Gaps = 21/1073 (1%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTDL+ ILI+GAGPIVIGQACEFDYSG QACKAL++EGY V+L+NSNPATIMTDP +AD
Sbjct: 3    KRTDLKTILIIGAGPIVIGQACEFDYSGAQACKALRDEGYRVVLVNSNPATIMTDPNMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
              YI P+  + VE+++ KE+PDALLPTMGGQTALN A+ LA+ G LEKY VELIGAK +A
Sbjct: 63   AVYIEPINWQTVEKIIAKEKPDALLPTMGGQTALNCALDLADHGVLEKYNVELIGAKREA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I+ AEDR+LF+ AM  IG+  P + + +TL+E + I   +G +P IIRP+FTLGG+GGGI
Sbjct: 123  IRMAEDRELFRVAMGEIGLDCPTAAVAHTLEEALEIQTRVG-YPTIIRPSFTLGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EE   I   GL  S T++VLVE+S+LGWKE+E+EV+RD ADN +I+C+IEN+DPMG
Sbjct: 182  AYNREELIEIVGRGLELSPTTEVLVEESVLGWKEFEMEVVRDTADNCIIVCAIENLDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQRLRD SIA++R+IGV+ GGSNVQF ++P  G V+VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQRLRDASIAVLRKIGVDTGGSNVQFGISPTTGRVVVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKK-TPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ N+IT   TPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGYTLDELKNEITGGLTPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVK-ELDWD 505
            FAFEKFP ++  LTTQMKSVGE MA+GRTF ES QKALR LE G  G   + +    + D
Sbjct: 362  FAFEKFPQADARLTTQMKSVGEVMAMGRTFSESLQKALRGLETGKIGLDPTGLDLSSEDD 421

Query: 506  WEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQS 565
               LK  L+ P P+R+  +  A + GM V +++ LSFID WFL Q +E++  EQ L    
Sbjct: 422  IATLKRELKAPGPERLFYVADAFRAGMTVADVYALSFIDPWFLDQIEEIVSHEQQLADDG 481

Query: 566  VSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANT 625
            ++ +       +KR GFSD ++A    S E+ VR  R +L V P YKRVD+CAAEF  +T
Sbjct: 482  MAALDAPRLRMLKRAGFSDARMAQLIGSNEESVRTLRRALKVRPVYKRVDSCAAEFATST 541

Query: 626  PYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNS 685
             Y+YS+Y+ ECE+ PT + K++ILGGGPNRIGQGIEFDYCC H + +L+  G+ETIM+N 
Sbjct: 542  AYLYSTYEDECEALPTDRDKIMILGGGPNRIGQGIEFDYCCVHAALALRDDGFETIMVNC 601

Query: 686  NPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEH 745
            NPETVSTDYDTSDRLYFEPLT+EDVL +++LE+P+G+IVQ+GGQTPLKL+          
Sbjct: 602  NPETVSTDYDTSDRLYFEPLTLEDVLEIVELEKPKGVIVQYGGQTPLKLA---------- 651

Query: 746  RLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEI 805
            R   A+G   V + GTSPDSID AEDRERF  ++ +L ++QP   IA++  +AL +A+EI
Sbjct: 652  RALEANG---VPVIGTSPDSIDLAEDRERFQQLVDKLGLKQPPNRIARNAEEALVLAREI 708

Query: 806  GYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALA 865
            GYP+VVRPSYVLGGRAMEIVY +  L  Y+ +AV+V  + PVL+D++L +A+E+DVD +A
Sbjct: 709  GYPLVVRPSYVLGGRAMEIVYGESDLARYVRDAVKVSNDSPVLLDRFLDNAVEVDVDIIA 768

Query: 866  DSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMN 925
            D  GNV+IGG+MEHIE+AGVHSGDS+C +P  ++S      +    + LA+ LNV GLMN
Sbjct: 769  DKDGNVLIGGVMEHIEEAGVHSGDSSCSLPPYSLSPQTQAELRRQVVMLAEGLNVVGLMN 828

Query: 926  CQYAITT--SGD--VYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKE 981
             Q+A+    +GD  VYLLE NPRASRTVPFVSKAIG PLAK AA  M+GK+L + G TKE
Sbjct: 829  TQFAVQVNEAGDDIVYLLEVNPRASRTVPFVSKAIGMPLAKIAARCMAGKTLAEQGATKE 888

Query: 982  VIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLS 1041
            ++P + SVKEA+ PF KFQG D +LGPEMRSTGEVMG+  SF  AFA+AQ A G K P  
Sbjct: 889  IVPDYYSVKEAIFPFAKFQGVDPILGPEMRSTGEVMGVGRSFSAAFARAQEAGGIKAPPL 948

Query: 1042 GTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAG 1101
            G  F+S+ D  K  +  +A+A ++ GF +V+T GT  +L+  G++ E V K+ EGRPH  
Sbjct: 949  GKAFVSVRDPDKQRVLPVAQALVERGFTLVATRGTGAWLQQNGLSCEIVNKVAEGRPHIV 1008

Query: 1102 DMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAI 1154
            D + NG+I  +V T+ G +    D   +RR  L ++V   TTV+GA A  +++
Sbjct: 1009 DSIKNGEIVYIVNTTEGRAAIS-DSFSIRREALQHRVTYSTTVAGAKALVQSL 1060


>gi|218893851|ref|YP_002442720.1| carbamoyl phosphate synthase large subunit [Pseudomonas aeruginosa
            LESB58]
 gi|218774079|emb|CAW29895.1| carbamoylphosphate synthetase large subunit [Pseudomonas aeruginosa
            LESB58]
          Length = 1073

 Score = 1261 bits (3264), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 626/1088 (57%), Positives = 807/1088 (74%), Gaps = 28/1088 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILILGAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPAMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+    V +++EKERPDALLPTMGGQTALN A+ L   G LEK+GVE+IGA  D 
Sbjct: 63   ATYIEPIKWATVAKIIEKERPDALLPTMGGQTALNCALDLERHGVLEKFGVEMIGANADT 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  F +AMK IG+  P SGI ++++E   +  ++G FP IIRP+FT+GGTGGGI
Sbjct: 123  IDKAEDRSRFDKAMKDIGLACPRSGIAHSMEEAYGVLEQVG-FPCIIRPSFTMGGTGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEFE IC  GL  S T+++L+++SL+GWKEYE+EV+RD  DN +I+CSIEN DPMG
Sbjct: 182  AYNREEFEEICARGLDLSPTNELLIDESLIGWKEYEMEVVRDKKDNCIIVCSIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGVE GGSNVQF + P  G ++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQIMRNASLAVLREIGVETGGSNVQFGICPNTGRMVVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT  +TPASFEP+IDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKIAAKLAVGYTLDELQNDITGGRTPASFEPAIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            FAFEKFP ++  LTTQMKSVGE MA+GRTFQES QKALR LE G +G+      +LD + 
Sbjct: 362  FAFEKFPKADARLTTQMKSVGEVMAIGRTFQESVQKALRGLEVGATGFD----PKLDLND 417

Query: 507  EQ----LKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLL 562
             +    LK  L VP+ +R+  +  A + G  V+E+ EL+ ID+WFL Q ++L+  E+ + 
Sbjct: 418  PEADSILKRELTVPSAERVWYVADAFRAGKSVEEVFELTRIDEWFLVQIEDLVKDEEKVK 477

Query: 563  TQSVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFE 622
            T  +S++ ++  Y++KR+GFSD ++A     TEK +R  R  L V+P YKRVDTCAAEF 
Sbjct: 478  TLGLSSIDRELMYKLKRKGFSDARLAKLLGVTEKNLRSHRHKLKVLPVYKRVDTCAAEFA 537

Query: 623  ANTPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIM 682
             +T YMYS+Y+ ECE+ P+ ++K++ILGGGPNRIGQGIEFDYCC H + +++  GYETIM
Sbjct: 538  TDTAYMYSTYEEECEANPSSREKIMILGGGPNRIGQGIEFDYCCVHAALAMREDGYETIM 597

Query: 683  MNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYL 742
            +N NPETVSTDYDTSDRLYFEP+T+EDVL ++ +E+P+G+IVQ+GGQTPLKL     + L
Sbjct: 598  VNCNPETVSTDYDTSDRLYFEPVTLEDVLEIVRVEQPKGVIVQYGGQTPLKLC----RAL 653

Query: 743  DEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIA 802
            +E  +P         I GTSPD+ID AEDRERF  +++ L++ QP    A+SE +ALA +
Sbjct: 654  EEAGVP---------IIGTSPDAIDRAEDRERFQQMVQRLNLRQPANATARSEDEALAAS 704

Query: 803  KEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVD 862
            K IGYP+VVRPSYVLGGRAMEIVY +E L  Y+  AV+V  + PVL+D +L+ AIE+D+D
Sbjct: 705  KAIGYPLVVRPSYVLGGRAMEIVYQEEELKRYMREAVQVSNDSPVLLDHFLNCAIEVDID 764

Query: 863  ALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCG 922
            A+ D    VVIG IM+HIEQAGVHSGDSAC +P  ++     D I     K+A  L V G
Sbjct: 765  AVCDG-EIVVIGAIMQHIEQAGVHSGDSACSLPPYSLPQHIQDEIREQVKKMALELGVVG 823

Query: 923  LMNCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEV 982
            LMN Q A+    D++++E NPRASRTVPFVSK +G  LAK AA VM+GK+L ++GF +E+
Sbjct: 824  LMNVQMAVQGE-DIFVIEVNPRASRTVPFVSKCVGESLAKVAARVMAGKTLAEVGFIQEI 882

Query: 983  IPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSG 1042
            IP   SVKEAV PF KF G D +LGPEM+STGEVMG+  SF  AFAKAQ+ A + LP +G
Sbjct: 883  IPPFFSVKEAVFPFAKFPGVDPILGPEMKSTGEVMGVGDSFAEAFAKAQLGASEILPTAG 942

Query: 1043 TVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGD 1102
              F+S+ +  KP   ++A   + +GF++V+T+GTA  +E  G+ V RV K+ EGRPH  D
Sbjct: 943  CAFISVREDDKPFAAQVAGDLVALGFEVVATAGTARVIEAAGLPVRRVNKVTEGRPHVVD 1002

Query: 1103 MVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTV 1162
            M+ N ++ +++ T+ G      D   +RR  L +K+   TT++G  A  EA++     TV
Sbjct: 1003 MIKNDEVTLIINTTEGRQ-SIADSYSIRRNALQHKICCTTTIAGGQAICEALKFGPEKTV 1061

Query: 1163 TMTALQDF 1170
                LQD 
Sbjct: 1062 RR--LQDL 1067


>gi|300023326|ref|YP_003755937.1| carbamoyl-phosphate synthase, large subunit [Hyphomicrobium
            denitrificans ATCC 51888]
 gi|299525147|gb|ADJ23616.1| carbamoyl-phosphate synthase, large subunit [Hyphomicrobium
            denitrificans ATCC 51888]
          Length = 1091

 Score = 1261 bits (3264), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 639/1105 (57%), Positives = 811/1105 (73%), Gaps = 41/1105 (3%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILI+GAGPIVIGQACEFDYSGTQACKAL+EEGY +IL+NSNPATIMTDP LAD
Sbjct: 3    KRTDIKSILIIGAGPIVIGQACEFDYSGTQACKALREEGYRIILVNSNPATIMTDPDLAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+TPE+V +++ KE+PDA+LPTMGGQTALN A+AL + G L+++GVELIGA   A
Sbjct: 63   ATYIEPITPEVVAKIIAKEKPDAILPTMGGQTALNTALALHQQGILQRHGVELIGANAAA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR LF++AMKTIG++TP S + +T +E       +G  P IIRP+FTLGGTGGGI
Sbjct: 123  IDKAEDRQLFREAMKTIGLETPRSKLAHTREEAADALEHVG-LPAIIRPSFTLGGTGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEF  I + GL AS T+Q+LVE+S+LGWKE+E+EV+RD ADN +IICSIENVDPMG
Sbjct: 182  AYNREEFFEIAERGLDASPTTQILVEESVLGWKEFEMEVVRDKADNCIIICSIENVDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPA TLTDKEYQ +RD SIA++REIGVE GGSNVQFAVNP DG ++VIEMN
Sbjct: 242  VHTGDSITVAPALTLTDKEYQIMRDASIAVLREIGVETGGSNVQFAVNPADGRLVVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD+I NDIT   TPASFEP+IDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGYTLDEIQNDITGGATPASFEPTIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDW-- 504
            FAFEKFPGS+  LTT MKSVGEAMA+GRTF+ES QKALRS+E G +G+   ++  +    
Sbjct: 362  FAFEKFPGSDTSLTTSMKSVGEAMAIGRTFRESMQKALRSMETGLTGFDDIHLDGIGQGD 421

Query: 505  DWEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQ 564
            D   ++ ++  P  DR+  +  A + G   +E+H+ S ID WFL + K ++D E  ++  
Sbjct: 422  DKNVVRAAVSRPTFDRILKVAQAFRLGFSQEEVHQYSKIDPWFLAEIKGVVDTEARVIAH 481

Query: 565  SVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEAN 624
             +   T+     +K +GFSD ++A   K +E +VR  R  LGV P +KR+DTCAAEF + 
Sbjct: 482  GLPK-TETQLRALKAQGFSDARLAHLAKVSEADVRRARHDLGVTPVFKRIDTCAAEFASP 540

Query: 625  TPYMYSSY------DFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGY 678
            T YMYS+Y      D  CE+ P+ K+K++ILGGGPNRIGQGIEFDYCCCH  F+L +AG+
Sbjct: 541  TAYMYSTYETGLSGDPVCEADPSDKEKIVILGGGPNRIGQGIEFDYCCCHACFALTAAGF 600

Query: 679  ETIMMNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLE----RPEGIIVQFGGQTPLKL 734
            ETIM+N NPETVSTDYDTSDRL+FEPLT EDVL +I +E    + +G+IVQFGGQTPLKL
Sbjct: 601  ETIMVNCNPETVSTDYDTSDRLFFEPLTAEDVLEIIRVESSKGKLKGVIVQFGGQTPLKL 660

Query: 735  SLPIHQYLDEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKS 794
            +      L+E  +P         I GTSPD+ID AEDR+RF A+I++L+++QPK GIAK+
Sbjct: 661  A----SALEEAGVP---------ILGTSPDAIDLAEDRDRFKALIEKLNLKQPKSGIAKT 707

Query: 795  EADALAIAKEIGYPVVVRPSYVLGGRAMEIVYTD---ETLVTYLENAVE------VDPER 845
              +A A+A+ IGYPVV+RPSYVLGGRAMEIV+     +  VT L   ++      V   R
Sbjct: 708  PGEARAVAETIGYPVVIRPSYVLGGRAMEIVHDGSEVDRYVTRLSATLDRPSELVVSERR 767

Query: 846  PVLIDKYLSDAIEIDVDALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLD 905
            P+LID YL+DA+E+DVD L+D   +  + GIMEHIE+AG+HSGDSAC +P  ++S+  + 
Sbjct: 768  PLLIDSYLTDAVEVDVDCLSDG-KDTFVAGIMEHIEEAGIHSGDSACSLPPHSLSADIIT 826

Query: 906  TISSWTIKLAKRLNVCGLMNCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAA 965
             +     +LA  L V GLMN Q+AI   G+V++LE NPRASRTVPFV+K IG P+A  A+
Sbjct: 827  ELERQARELALALRVVGLMNIQFAI-KDGEVFILEVNPRASRTVPFVAKVIGLPIASIAS 885

Query: 966  LVMSGKSLNDLGFTKEVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPI 1025
             +M+GK L      K V  KH++VKEAV PF +F G D +LGPEMRSTGEVMGID  F +
Sbjct: 886  RIMAGKPLASFELKKPVY-KHIAVKEAVFPFARFLGVDPILGPEMRSTGEVMGIDHDFAM 944

Query: 1026 AFAKAQIAAGQKLPLSGTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGI 1085
            AF K+Q+ AGQ LP  GTVF+S+ +  K  +    K    +GFK+V+T GT  FLE  GI
Sbjct: 945  AFGKSQLGAGQTLPSGGTVFVSVKESDKARIVGPVKELEAMGFKVVATRGTKRFLEANGI 1004

Query: 1086 AVERVLKMHEGRPHAGDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVS 1145
              E + K+ EGRPH  D + NG I ++  T+ G S    D   +RR  L + +P  TT+S
Sbjct: 1005 QCESINKVLEGRPHIVDAIKNGDIHLVFNTTEG-SKALSDSKDIRRTALLHHIPYYTTLS 1063

Query: 1146 GALANAEAIRSLKSNTVTMTALQDF 1170
            GA+A   AIR+L S+T+ +  LQ F
Sbjct: 1064 GAVAVTRAIRALNSDTLQVAPLQAF 1088


>gi|395647260|ref|ZP_10435110.1| carbamoyl phosphate synthase large subunit [Pseudomonas
            extremaustralis 14-3 substr. 14-3b]
          Length = 1073

 Score = 1261 bits (3264), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 629/1088 (57%), Positives = 805/1088 (73%), Gaps = 28/1088 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILILGAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPAMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  + V +++EKERPDALLPTMGGQTALN A+ L   G LEK+GVE+IGA  D 
Sbjct: 63   ATYIEPIKWQTVAKIIEKERPDALLPTMGGQTALNCALDLEREGILEKFGVEMIGANADT 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  F +AMK+IG+  P SGI ++++E  ++   +G FP IIRP+FT+GGTGGGI
Sbjct: 123  IDKAEDRSRFDKAMKSIGLACPRSGIAHSMEEANAVLETLG-FPCIIRPSFTMGGTGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEFE IC  GL  S T ++L+++SL+GWKEYE+EV+RD  DN +I+CSIEN DPMG
Sbjct: 182  AYNREEFEEICARGLDLSPTKELLIDESLIGWKEYEMEVVRDKKDNCIIVCSIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ LR+ S+A++REIGVE GGSNVQF + P  G ++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQILRNASLAVLREIGVETGGSNVQFGICPTTGRMVVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT  KTPASFEPSIDYVVTK+PR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGYTLDELSNDITGGKTPASFEPSIDYVVTKLPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            FAFEKFP ++  LTTQMKSVGE MA+GRTFQES QKALR LE G  G      ++LD   
Sbjct: 362  FAFEKFPKADARLTTQMKSVGEVMAIGRTFQESLQKALRGLEVGVCGLD----EKLDLSN 417

Query: 507  EQ----LKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLL 562
             +    LK  L VP  +R+  +  A + GM V++I  ++ ID WFL Q ++LI  E+ + 
Sbjct: 418  PESMSVLKRELTVPGAERIWYVADAFRAGMTVEDIFGMNMIDPWFLVQIEDLIKEEEKVK 477

Query: 563  TQSVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFE 622
            T  ++++ +D  + +KR+GFSD+++A     TEK +R  R  L + P YKRVDTCAAEF 
Sbjct: 478  TLGLASIDRDTMFRLKRKGFSDQRLAKLLGVTEKNLRTHRHKLEIFPVYKRVDTCAAEFS 537

Query: 623  ANTPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIM 682
             +T Y+YS+Y+ ECE+AP+ + K++ILGGGPNRIGQGIEFDYCC H + +L+  GYETIM
Sbjct: 538  TDTAYLYSTYEEECEAAPSGRDKIMILGGGPNRIGQGIEFDYCCVHAALALREDGYETIM 597

Query: 683  MNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYL 742
            +N NPETVSTDYDTSDRLYFEP+T+EDVL ++ +E+P+G+IVQ+GGQTPLKL+       
Sbjct: 598  VNCNPETVSTDYDTSDRLYFEPVTLEDVLEIVRVEKPKGVIVQYGGQTPLKLA------- 650

Query: 743  DEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIA 802
               R   A+G   V I GTSPD+ID AEDRERF  +++ L++ QP     +SE +A+  A
Sbjct: 651  ---RALEAAG---VPIIGTSPDAIDRAEDRERFQQMVERLNLRQPPNATVRSEDEAIRAA 704

Query: 803  KEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVD 862
             +IGYP+VVRPSYVLGGRAMEIVY +E L  YL +AV+V  + PVL+D +L+ AIE+DVD
Sbjct: 705  AKIGYPLVVRPSYVLGGRAMEIVYEEEELKRYLRDAVKVSNDSPVLLDHFLNCAIEMDVD 764

Query: 863  ALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCG 922
            A+ D   +VVIG IM+HIEQAGVHSGDSAC +P  ++ +   D +     ++A  L V G
Sbjct: 765  AVCDGT-DVVIGAIMQHIEQAGVHSGDSACSLPPYSLPAHIQDEMRDQVKRMALELGVVG 823

Query: 923  LMNCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEV 982
            LMN Q A+    D+Y++E NPRASRTVPFVSK IG  LA  AA VM+GK+L ++GFTKE+
Sbjct: 824  LMNVQLALQGE-DIYVIEVNPRASRTVPFVSKCIGVSLAMIAARVMAGKTLKEIGFTKEI 882

Query: 983  IPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSG 1042
            IP   SVKEAV PF KF G D +LGPEM+STGEVMG+  +F  AFAKAQ+ A + LP  G
Sbjct: 883  IPNFYSVKEAVFPFAKFPGVDPILGPEMKSTGEVMGVGDTFGEAFAKAQMGASEVLPTGG 942

Query: 1043 TVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGD 1102
            T F+S+ D  KP +  +A+  +++GF+IV+T+GTA  +E  G+ V RV K+ EGRPH  D
Sbjct: 943  TAFISVRDDDKPLVAGVARDLINLGFEIVATAGTAKLIEAAGLKVRRVNKVTEGRPHVVD 1002

Query: 1103 MVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTV 1162
            M+ N ++ +++ T+ G      D   +RR  L +K+   TT++   A  EA++     TV
Sbjct: 1003 MIKNDEVTLIINTTEGRQ-SIADSYSIRRNALQHKIYCTTTIAAGEAVCEALKFGPEKTV 1061

Query: 1163 TMTALQDF 1170
                LQD 
Sbjct: 1062 RR--LQDL 1067


>gi|224823860|ref|ZP_03696969.1| carbamoyl-phosphate synthase, large subunit [Pseudogulbenkiania
            ferrooxidans 2002]
 gi|224604315|gb|EEG10489.1| carbamoyl-phosphate synthase, large subunit [Pseudogulbenkiania
            ferrooxidans 2002]
          Length = 1070

 Score = 1261 bits (3263), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 626/1064 (58%), Positives = 801/1064 (75%), Gaps = 24/1064 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTDL+ ILI+GAGPIVIGQACEFDYSG QACKAL+EEGY+VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDLKSILIIGAGPIVIGQACEFDYSGAQACKALREEGYKVILVNSNPATIMTDPDMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  ++VE+++ KERPDA+LPTMGGQTALN A+ LA +G LEKY VELIGA  DA
Sbjct: 63   VTYIEPINWQVVEKIIAKERPDAILPTMGGQTALNCALDLARNGVLEKYKVELIGATEDA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  FK+AM  IG+  P S + +T++E ++   ++G FP +IRP+FT+GG+GGGI
Sbjct: 123  IDKAEDRGRFKEAMAKIGLSCPLSFVCHTMEESLAAQAKVG-FPTLIRPSFTMGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYNKEEF AIC+ G  AS T ++L+E+S+LGWKEYE+EV+RD  DN +IICSIEN DPMG
Sbjct: 182  AYNKEEFLAICERGFEASPTHELLIEQSVLGWKEYEMEVVRDRNDNCIIICSIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGV+ GGSNVQFA NP  GE++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQIMRNASLAVLREIGVDTGGSNVQFATNPDTGEMIVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VG++LD++ NDIT   TPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKIAAKLAVGFTLDELKNDITGGATPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            FAFEKFP ++  LTTQMKSVGE MA+GRT QES QKALR LE G +G+       +  D 
Sbjct: 362  FAFEKFPQADDRLTTQMKSVGEVMAMGRTLQESMQKALRGLETGLAGF-----DPVTSDL 416

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
            EQ+++ +  P P+R+  +  A + G+  D+I  +S ID WFL Q ++++  E+ L  + +
Sbjct: 417  EQIRHEIGTPGPERILYVADAFRAGLSRDDIFAISKIDPWFLAQIEDIVGEEKALAGRKL 476

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
              +   +   +KR+GFSD+++       +  VR +R +L + P YKRVDTCAAEF  NT 
Sbjct: 477  DELDYAELRRLKRKGFSDRRLGALLGVDQGAVRARRWALNLRPVYKRVDTCAAEFATNTA 536

Query: 627  YMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSN 686
            YMYSSY+ ECES PT +KK+++LGGGPNRIGQGIEFDYCC H + +L+ +G+ETIM+N N
Sbjct: 537  YMYSSYEEECESRPTDRKKIMVLGGGPNRIGQGIEFDYCCVHAALALRESGFETIMVNCN 596

Query: 687  PETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHR 746
            PETVSTDYDTSDRLYFEPLT+EDVL +  +E+P G+IVQ+GGQTPLKL+          R
Sbjct: 597  PETVSTDYDTSDRLYFEPLTLEDVLEICHVEKPFGVIVQYGGQTPLKLA----------R 646

Query: 747  LPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEIG 806
               A+G   V I GT+PD ID AEDRERF  +++EL ++QP    A++ ADA+ +A+EIG
Sbjct: 647  ALEANG---VPIIGTTPDMIDCAEDRERFQKMLQELGLKQPPNRTARTPADAMRLAEEIG 703

Query: 807  YPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALAD 866
            YP+VVRPSYVLGGRAMEIV+    L  Y+  AV+V  + PVL+D++L+DAIE+DVDA++D
Sbjct: 704  YPLVVRPSYVLGGRAMEIVHEPADLERYMREAVKVSNDSPVLLDRFLNDAIEVDVDAVSD 763

Query: 867  SCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNC 926
                VVIGGIM+H+EQAGVHSGDSAC +P  ++  +  D I   T+ +AK LNV GLMN 
Sbjct: 764  G-ELVVIGGIMQHVEQAGVHSGDSACSLPPYSLFPAVQDEIRRQTVAMAKALNVVGLMNV 822

Query: 927  QYAITTSGD-VYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPK 985
            Q+AI   GD +Y+LE NPRASRTVPFVSK  G PLAK AA  M+G SL + GFTKEV+P 
Sbjct: 823  QFAI--QGDTIYVLEVNPRASRTVPFVSKVTGAPLAKIAARCMAGISLTEQGFTKEVVPP 880

Query: 986  HVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVF 1045
            + +VKEAV PF KF G D +LGPEM+STGEVMG+  SF  AF KA++AAG +LP +G VF
Sbjct: 881  YYAVKEAVFPFIKFPGVDTILGPEMKSTGEVMGVGRSFAEAFIKAELAAGDRLPKAGKVF 940

Query: 1046 LSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVA 1105
            LS+ +  K     +A+  + +GF++V+T GTA  ++  GI V+ + K++EGRPH  DM+ 
Sbjct: 941  LSVRNSDKAGSVEVAREMVRLGFEVVATRGTARGIQEAGIPVQLINKVNEGRPHIVDMIK 1000

Query: 1106 NGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALA 1149
            NG+I ++  T         D   +RR  L  +VP  TT++GA A
Sbjct: 1001 NGEISLVFNTVDEKRQAIQDSHSIRRSALQMRVPQYTTLAGAKA 1044



 Score =  242 bits (617), Expect = 9e-61,   Method: Compositional matrix adjust.
 Identities = 159/447 (35%), Positives = 241/447 (53%), Gaps = 32/447 (7%)

Query: 42  GSLSLRSWPPQLTRYSRSRVRASSAKIDS-SAELSNGAA---SSKDQKLGKR-TDLRKIL 96
           G++  R W   L        R    ++D+ +AE +   A   SS +++   R TD +KI+
Sbjct: 506 GAVRARRWALNL--------RPVYKRVDTCAAEFATNTAYMYSSYEEECESRPTDRKKIM 557

Query: 97  ILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLADRTYITPMTP 156
           +LG GP  IGQ  EFDY    A  AL+E G+E I++N NP T+ TD   +DR Y  P+T 
Sbjct: 558 VLGGGPNRIGQGIEFDYCCVHAALALRESGFETIMVNCNPETVSTDYDTSDRLYFEPLTL 617

Query: 157 ELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDAIKKAEDRDL 216
           E V ++   E+P  ++   GGQT L LA       ALE  GV +IG   D I  AEDR+ 
Sbjct: 618 EDVLEICHVEKPFGVIVQYGGQTPLKLA------RALEANGVPIIGTTPDMIDCAEDRER 671

Query: 217 FKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGIAYNKEEFEA 276
           F++ ++ +G+K PP+    T  + + +A EIG +PL++RP++ LGG    I +   + E 
Sbjct: 672 FQKMLQELGLKQPPNRTARTPADAMRLAEEIG-YPLVVRPSYVLGGRAMEIVHEPADLER 730

Query: 277 ICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMGVHTGDSITV 336
             +  +  S  S VL+++ L    E +++ + D  + VVI   +++V+  GVH+GDS   
Sbjct: 731 YMREAVKVSNDSPVLLDRFLNDAIEVDVDAVSD-GELVVIGGIMQHVEQAGVHSGDSACS 789

Query: 337 APAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMNPRVSRSSAL 396
            P  +L       +R  ++A+ + + V  G  NVQFA+      + V+E+NPR SR+   
Sbjct: 790 LPPYSLFPAVQDEIRRQTVAMAKALNV-VGLMNVQFAIQ--GDTIYVLEVNPRASRTVPF 846

Query: 397 ASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRFAFEKFPGSE 456
            SK TG P+AK+AA+   G SL +     TK+          Y   K   F F KFPG +
Sbjct: 847 VSKVTGAPLAKIAARCMAGISLTE--QGFTKEVVPP------YYAVKEAVFPFIKFPGVD 898

Query: 457 PLLTTQMKSVGEAMALGRTFQESFQKA 483
            +L  +MKS GE M +GR+F E+F KA
Sbjct: 899 TILGPEMKSTGEVMGVGRSFAEAFIKA 925


>gi|393759708|ref|ZP_10348520.1| carbamoyl phosphate synthase large subunit [Alcaligenes faecalis
            subsp. faecalis NCIB 8687]
 gi|393161520|gb|EJC61582.1| carbamoyl phosphate synthase large subunit [Alcaligenes faecalis
            subsp. faecalis NCIB 8687]
          Length = 1080

 Score = 1261 bits (3263), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 633/1078 (58%), Positives = 812/1078 (75%), Gaps = 27/1078 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KR+DL+ ILI+GAGPI+IGQACEFDYSG QACKALK EGY  +L+NSNPATIMTDP  AD
Sbjct: 3    KRSDLKSILIIGAGPIIIGQACEFDYSGAQACKALKAEGYRTVLVNSNPATIMTDPDTAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+T + VE+++EKERPDALLPTMGGQTALN A+ LA+ G LEK+GVELIGA   A
Sbjct: 63   VTYIEPITWQAVEKIIEKERPDALLPTMGGQTALNCALDLAKHGVLEKFGVELIGANAAA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECIS----IANEIGE--FPLIIRPAFTLG 261
            I+KAEDR  FK AM +IG+++  SG+ +++DE  +    IA EIG   FP++IRP+FTLG
Sbjct: 123  IEKAEDRLKFKDAMTSIGLESAKSGVAHSMDEAWAVQKRIAEEIGTAGFPVVIRPSFTLG 182

Query: 262  GTGGGIAYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIE 321
            GTGGGIAYN EEFE IC+ GL AS T ++L+E+SLLGWKE+E+EV+RD ADN +I+CSIE
Sbjct: 183  GTGGGIAYNPEEFETICRRGLEASPTKELLIEESLLGWKEFEMEVVRDRADNCIIVCSIE 242

Query: 322  NVDPMGVHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEV 381
            N+DPMGVHTGDSITVAPAQTLTD+EYQ +R+ SIA++REIGV+ GGSNVQFAVNP +G +
Sbjct: 243  NLDPMGVHTGDSITVAPAQTLTDREYQIMRNASIAVLREIGVDTGGSNVQFAVNPDNGRM 302

Query: 382  MVIEMNPRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITK-KTPASFEPSIDYV 440
            +VIEMNPRVSRSSALASKATGFPIAK+AA+L+VGY+LD++ N+IT   TPASFEP+IDYV
Sbjct: 303  IVIEMNPRVSRSSALASKATGFPIAKIAARLAVGYTLDELLNEITGGATPASFEPTIDYV 362

Query: 441  VTKIPRFAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVK 500
            VTK+PRFAFEKFP ++  LTTQMKSVGE MA+GRTFQESFQKALR LE G  G     + 
Sbjct: 363  VTKVPRFAFEKFPQADSRLTTQMKSVGEVMAIGRTFQESFQKALRGLEVGVDG-----LN 417

Query: 501  ELDWDWEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQF 560
            +   D E+L+  L  P P+R+  +  A  +G+ +DE+H L+ ID WFL Q KE++D+E  
Sbjct: 418  QKTTDREKLQVELGEPGPERIWYVGDAFAQGLSLDEVHNLTKIDPWFLAQIKEIVDIELA 477

Query: 561  LLTQSVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAE 620
            L  ++++++ ++  + +KRRGFSD+++AF   + E EVR+ R  L V P YKRVDTCAAE
Sbjct: 478  LEQKTLADLDRETLFGLKRRGFSDRRLAFLLDTVESEVRKLRHQLNVRPVYKRVDTCAAE 537

Query: 621  FEANTPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYET 680
            F  +T YMYS+Y+ ECES P+ KKK+++LGGGPNRIGQGIEFDYCC H + +L+  GYET
Sbjct: 538  FATDTAYMYSTYEEECESNPSDKKKIIVLGGGPNRIGQGIEFDYCCVHAALALREDGYET 597

Query: 681  IMMNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQ 740
            IM+N NPETVSTDYDTSDRLYFEPLT+EDVL ++ +E+P G IVQ+GGQTPLKL+     
Sbjct: 598  IMVNCNPETVSTDYDTSDRLYFEPLTLEDVLEIVHIEKPVGTIVQYGGQTPLKLA----- 652

Query: 741  YLDEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALA 800
                 R   A+G   V I GTSP+SID AEDRERF  ++ +L + QP    A++E +A+A
Sbjct: 653  -----RALEANG---VPIIGTSPESIDVAEDRERFQKLLNKLGLRQPPNRTARTEGEAIA 704

Query: 801  IAKEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEID 860
            +A EIGYP+VVRPSYVLGGRAMEIV+  + L  Y+  AV+V  + PVL+D +L++A E+D
Sbjct: 705  LAAEIGYPLVVRPSYVLGGRAMEIVHEQQDLERYMREAVKVSNDSPVLLDHFLNNATEVD 764

Query: 861  VDALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNV 920
            VD LAD    V +GG+M+HIEQAGVHSGDSAC +P  ++S   +  I   T  +AK LNV
Sbjct: 765  VDCLADG-ERVFVGGVMQHIEQAGVHSGDSACSLPPYSLSDETVAEIKRQTALMAKALNV 823

Query: 921  CGLMNCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTK 980
             GLMN Q+AI   GDVY+LE NPRASRTVPFVSKA G  LAK AA  M+G++L + G T+
Sbjct: 824  KGLMNVQFAI-QDGDVYVLEVNPRASRTVPFVSKATGLQLAKIAARAMAGQTLAEQGITE 882

Query: 981  EVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPL 1040
            E+ P + SVKEAV PF KF G D +LGPEM+STGEVMG+  SF  AF K+Q+AA   LP 
Sbjct: 883  EITPPYYSVKEAVFPFVKFPGVDTILGPEMKSTGEVMGVGTSFAEAFVKSQMAASVNLPD 942

Query: 1041 SGTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHA 1100
             G  F+S+    KP    +A+  + +GFK+V+T GTA  +E  G+AV+ V K+ EGRPH 
Sbjct: 943  GGLAFISVRAQDKPQAVEVARGLISLGFKVVATRGTASAIEQAGLAVQVVNKVTEGRPHI 1002

Query: 1101 GDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLK 1158
             DM+ NG++ +++ T        +D   +R   LA  +   TT++GA+A  + ++ L+
Sbjct: 1003 VDMIKNGEVSLVINTVEERRNAIVDSRTIRTHALAANLAYYTTIAGAVAAVQGLQYLR 1060


>gi|285018123|ref|YP_003375834.1| carbamoyl-phosphate synthetase large chain protein [Xanthomonas
            albilineans GPE PC73]
 gi|283473341|emb|CBA15846.1| probable carbamoyl-phosphate synthetase large chain protein
            [Xanthomonas albilineans GPE PC73]
          Length = 1080

 Score = 1261 bits (3263), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 625/1069 (58%), Positives = 801/1069 (74%), Gaps = 23/1069 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTDL+ ILI+GAGPIVIGQACEFDYSG QACKAL++EGY V+L+NSNPATIMTDP +AD
Sbjct: 3    KRTDLQTILIIGAGPIVIGQACEFDYSGAQACKALRDEGYRVVLVNSNPATIMTDPNMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
              YI P+  + VE+++ KE+PDALLPTMGGQTALN A+ LA+ G LEKYGVELIGAK +A
Sbjct: 63   AVYIEPINWQTVEKIIAKEKPDALLPTMGGQTALNCALDLADHGVLEKYGVELIGAKREA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I+ AEDR+LF+ AM  IG++ P + +  TL+E + I   +G +P IIRP+FTLGG+GGGI
Sbjct: 123  IRMAEDRELFRVAMGEIGLECPKAAVARTLEEALEIQTRVG-YPTIIRPSFTLGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EE   I   GL  S TS+VLVE+S+LGWKE+E+EV+RD ADN +I+C+IEN+DPMG
Sbjct: 182  AYNREELIEIVGRGLELSPTSEVLVEESVLGWKEFEMEVVRDTADNCIIVCAIENLDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQRLRD SIA++R+IGV+ GGSNVQF +N   G V+VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQRLRDASIAVLRKIGVDTGGSNVQFGINAQTGRVVVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKK-TPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ N+IT   TPASFEP+IDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGYTLDELKNEITGGLTPASFEPAIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCS--NVKELDW 504
            FAFEKFP ++  LTTQMKSVGE MA+GRTF ES QKALR LE G  G   +  +++  D 
Sbjct: 362  FAFEKFPQADARLTTQMKSVGEVMAMGRTFSESLQKALRGLETGKIGLDPTGLDLRNED- 420

Query: 505  DWEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQ 564
            D   L++ L+ P P+R+  +  A + GM V+++H LSFID WFL Q ++LI  E+ +  +
Sbjct: 421  DLAALRHELKAPGPERLFYVADAFRAGMSVEQVHALSFIDPWFLDQMEDLIAQEKQVAAE 480

Query: 565  SVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEAN 624
             +  +       +KR GFSD ++A  T + E  +R  R +  V P YKRVD+CAAEF  +
Sbjct: 481  GLDALDAARLRTLKRAGFSDARLAQLTGTNEAAIRALRRAHKVRPVYKRVDSCAAEFATS 540

Query: 625  TPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMN 684
            T Y+YS+Y+ ECE+ P+ + K++ILGGGPNRIGQGIEFDYCC H + +L+  GYETIM+N
Sbjct: 541  TAYLYSTYEDECEATPSDRNKIMILGGGPNRIGQGIEFDYCCVHAALALREDGYETIMVN 600

Query: 685  SNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDE 744
             NPETVSTDYDTSDRLYFEPLT+EDVL ++DLE+P+G+IVQ+GGQTPLKL+         
Sbjct: 601  CNPETVSTDYDTSDRLYFEPLTLEDVLEIVDLEQPKGVIVQYGGQTPLKLA--------- 651

Query: 745  HRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKE 804
             R   A+G   V + GTSPDSID AEDRERF  ++ +L ++QP   IA++  +AL +A+E
Sbjct: 652  -RALEANG---VPVIGTSPDSIDLAEDRERFQQLVDQLGLKQPPNRIARNAEEALVLARE 707

Query: 805  IGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDAL 864
            IGYP+VVRPSYVLGGRAMEIVY +  L  Y+ +AV+V  E PVL+D++L +A+E+DVD +
Sbjct: 708  IGYPLVVRPSYVLGGRAMEIVYGESDLARYVRDAVKVSNESPVLLDRFLDNAVEVDVDII 767

Query: 865  ADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLM 924
            AD  G V+IGG+MEHIE+AGVHSGDS+C +P  ++S +    +    ++LAK L+V GLM
Sbjct: 768  ADKDGKVLIGGVMEHIEEAGVHSGDSSCSLPPYSLSPATQAELRRQVVELAKALHVVGLM 827

Query: 925  NCQYAITT--SGD--VYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTK 980
            N Q+A+    +GD  VYLLE NPRASRTVPFVSKAIG PLAK AA  M+GK+L + G  K
Sbjct: 828  NTQFAVQVNDAGDDIVYLLEVNPRASRTVPFVSKAIGVPLAKIAARCMAGKTLAEQGALK 887

Query: 981  EVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPL 1040
            E++P + SVKEA+ PF KFQG D +LGPEMRSTGEVMG+  SF  AFA+AQ A G K P 
Sbjct: 888  EIVPDYYSVKEAIFPFAKFQGVDPILGPEMRSTGEVMGVGRSFSAAFARAQEAGGIKAPP 947

Query: 1041 SGTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHA 1100
             G  F+S+ D  K  +  +A+A ++ G+ +V+T GT  +L+  G+  E+V K+ EGRPH 
Sbjct: 948  LGKAFVSVRDPDKQRVLPVAQALVERGYTLVATRGTCAWLQQNGLQCEQVNKVAEGRPHI 1007

Query: 1101 GDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALA 1149
             D + NG+I  +V T+ G      D   +RR  L  +V   TTV+GA A
Sbjct: 1008 VDRIKNGEIVYIVNTTEGRPAIS-DSFSIRREALQQRVTYSTTVAGARA 1055


>gi|430762396|ref|YP_007218253.1| Carbamoyl-phosphate synthase large chain [Thioalkalivibrio
            nitratireducens DSM 14787]
 gi|430012020|gb|AGA34772.1| Carbamoyl-phosphate synthase large chain [Thioalkalivibrio
            nitratireducens DSM 14787]
          Length = 1079

 Score = 1261 bits (3263), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 635/1096 (57%), Positives = 808/1096 (73%), Gaps = 22/1096 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ +LILGAGPIVIGQACEFDYSG QACKAL+EEG+ VIL+NSNPATIMTDP  AD
Sbjct: 3    KRTDIQSVLILGAGPIVIGQACEFDYSGAQACKALREEGFRVILVNSNPATIMTDPETAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
              YI P+   +V +V+EKERPDALLPTMGGQTALN A+ LA  G L+KYGVE+IGA  DA
Sbjct: 63   AVYIEPVDWRVVARVIEKERPDALLPTMGGQTALNCALDLAREGVLKKYGVEMIGANEDA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I  AEDR+ F++AM  IG+ TP + I NT DE   +  EIG FP+IIRP+FTLGG+GGGI
Sbjct: 123  IDMAEDRERFREAMTEIGLATPTAFIANTWDEAQKVQPEIG-FPVIIRPSFTLGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEFE I K GL  S T++VL+E+S+LGWKE+E+EV+RD ADN +IICSIEN+DPMG
Sbjct: 182  AYNREEFEEIVKGGLDLSPTNEVLLEESVLGWKEFEMEVVRDKADNCIIICSIENLDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ LR+ SIA++R+IGVE GGSNVQFAVNP DG ++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQILRNASIAVLRKIGVETGGSNVQFAVNPDDGRLIVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKK-TPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT   TPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGYTLDELRNDITGGLTPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            F FEKFP ++  LTTQMKSVGE MA+GRTFQES QKALR LE G  G         D   
Sbjct: 362  FTFEKFPQAQARLTTQMKSVGEVMAIGRTFQESLQKALRGLETGADGLDEKVDLNADDVT 421

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
            E+L+  L  P P+R+  +    + G+ ++++  L+ ID+WFL Q  +LI++E+ +  + +
Sbjct: 422  ERLRTLLGNPGPERIFNVADGFRAGLSIEDVFGLTAIDRWFLAQIHQLIEIERGVRDRFL 481

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
            ++++  + +++KRRGFSD+++A     TEK VR++R +L V P YKRVDTCAAEF   T 
Sbjct: 482  NDLSAAELFDLKRRGFSDRRLAKLLNETEKAVRKQRQALRVHPVYKRVDTCAAEFATTTA 541

Query: 627  YMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSN 686
            YMYS+Y+ E E+ P+ ++K+++LGGGPNRIGQGIEFDYCC H + +++  GYETIM+N N
Sbjct: 542  YMYSTYEDESEAEPSDREKIMVLGGGPNRIGQGIEFDYCCVHAALAMREDGYETIMVNCN 601

Query: 687  PETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHR 746
            PETVSTDYDTSDRLYFEPLT+EDVL ++ +E+P+G+IVQ+GGQTPLKL+          R
Sbjct: 602  PETVSTDYDTSDRLYFEPLTLEDVLEIVAVEQPKGVIVQYGGQTPLKLA----------R 651

Query: 747  LPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEIG 806
               A+G   V I GTSPDSID AEDRERF  ++++L + QP    A+SE +A  +A EIG
Sbjct: 652  DLEAAG---VPIIGTSPDSIDLAEDRERFQHLLQKLDLRQPPNRTARSEDEAEKLAAEIG 708

Query: 807  YPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALAD 866
            YP+VVRPSYVLGGRAMEIV  ++ L  Y+ +AV V  + PVL+D++L DAIE+DVDA+ D
Sbjct: 709  YPLVVRPSYVLGGRAMEIVRDEDDLKRYMRDAVSVSNDAPVLLDRFLDDAIEVDVDAICD 768

Query: 867  SCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNC 926
               +V IGGIMEHIEQAGVHSGDSAC +P  ++S    D +     ++A  L V GLMN 
Sbjct: 769  G-QDVFIGGIMEHIEQAGVHSGDSACSLPPFSLSDRLQDEMVEQVRRMALGLKVVGLMNT 827

Query: 927  QYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPKH 986
            Q+AI     +++LE NPRASRTVPFVSK +G PLAK AA  M G+SL        V P +
Sbjct: 828  QFAIQGES-IFVLEVNPRASRTVPFVSKVVGLPLAKIAARCMVGQSLKGQNLHAPVRPDY 886

Query: 987  VSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVFL 1046
             +VKEAV PF KF G D +LGPEM+STGEVMG+  SF  AFAK+Q+ AG +LP  G  F+
Sbjct: 887  YAVKEAVFPFAKFPGVDPILGPEMKSTGEVMGVGRSFAEAFAKSQLGAGVRLPARGKAFV 946

Query: 1047 SLNDLTK-PHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVA 1105
            S+ D+ K P L ++ +  +++GF +++T GTA FL+ +G+ V  V K+ EGRPH  DM+ 
Sbjct: 947  SVRDIDKNPALAKVGRRLVELGFDVLATRGTAAFLQEQGVGVTVVNKVTEGRPHIVDMIK 1006

Query: 1106 NGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTVTMT 1165
            N ++  +V T  G      D   +RR  L +KV   TT++GALA  +A+  L+   V   
Sbjct: 1007 NDEVSFIVNTVEGKQA-TADSFTIRREALMHKVSYTTTIAGALATVQALDHLEFENVFR- 1064

Query: 1166 ALQDFFDVETASGSSE 1181
             LQD  + E   G SE
Sbjct: 1065 -LQDLHE-EALRGRSE 1078



 Score =  243 bits (620), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 153/433 (35%), Positives = 240/433 (55%), Gaps = 32/433 (7%)

Query: 60  RVRASSAKIDS-SAELSNGAA----SSKDQKLGKRTDLRKILILGAGPIVIGQACEFDYS 114
           RV     ++D+ +AE +   A    + +D+   + +D  KI++LG GP  IGQ  EFDY 
Sbjct: 521 RVHPVYKRVDTCAAEFATTTAYMYSTYEDESEAEPSDREKIMVLGGGPNRIGQGIEFDYC 580

Query: 115 GTQACKALKEEGYEVILINSNPATIMTDPGLADRTYITPMTPELVEQVLEKERPDALLPT 174
              A  A++E+GYE I++N NP T+ TD   +DR Y  P+T E V +++  E+P  ++  
Sbjct: 581 CVHAALAMREDGYETIMVNCNPETVSTDYDTSDRLYFEPLTLEDVLEIVAVEQPKGVIVQ 640

Query: 175 MGGQTALNLAVALAESGALEKYGVELIGAKLDAIKKAEDRDLFKQAMKTIGVKTPPSGIG 234
            GGQT L LA        LE  GV +IG   D+I  AEDR+ F+  ++ + ++ PP+   
Sbjct: 641 YGGQTPLKLA------RDLEAAGVPIIGTSPDSIDLAEDRERFQHLLQKLDLRQPPNRTA 694

Query: 235 NTLDECISIANEIGEFPLIIRPAFTLGGTGGGIAYNKEEFEAICKAGLAASLTSQVLVEK 294
            + DE   +A EIG +PL++RP++ LGG    I  ++++ +   +  ++ S  + VL+++
Sbjct: 695 RSEDEAEKLAAEIG-YPLVVRPSYVLGGRAMEIVRDEDDLKRYMRDAVSVSNDAPVLLDR 753

Query: 295 SLLGWKEYELEVMRDLADNVVIICSIENVDPMGVHTGDSITVAPAQTLTDKEYQRLRDYS 354
            L    E +++ + D  D V I   +E+++  GVH+GDS    P  +L+D    RL+D  
Sbjct: 754 FLDDAIEVDVDAICDGQD-VFIGGIMEHIEQAGVHSGDSACSLPPFSLSD----RLQDEM 808

Query: 355 IAIIREIGVE---CGGSNVQFAVNPVDGE-VMVIEMNPRVSRSSALASKATGFPIAKMAA 410
           +  +R + +     G  N QFA+    GE + V+E+NPR SR+    SK  G P+AK+AA
Sbjct: 809 VEQVRRMALGLKVVGLMNTQFAIQ---GESIFVLEVNPRASRTVPFVSKVVGLPLAKIAA 865

Query: 411 KLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRFAFEKFPGSEPLLTTQMKSVGEAM 470
           +  VG SL        +   A   P  DY   K   F F KFPG +P+L  +MKS GE M
Sbjct: 866 RCMVGQSLK------GQNLHAPVRP--DYYAVKEAVFPFAKFPGVDPILGPEMKSTGEVM 917

Query: 471 ALGRTFQESFQKA 483
            +GR+F E+F K+
Sbjct: 918 GVGRSFAEAFAKS 930


>gi|294669529|ref|ZP_06734596.1| hypothetical protein NEIELOOT_01428 [Neisseria elongata subsp.
            glycolytica ATCC 29315]
 gi|291308442|gb|EFE49685.1| hypothetical protein NEIELOOT_01428 [Neisseria elongata subsp.
            glycolytica ATCC 29315]
          Length = 1071

 Score = 1261 bits (3263), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 624/1076 (57%), Positives = 800/1076 (74%), Gaps = 22/1076 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTDL+ ILI+GAGPIVIGQACEFDYSG QACKAL+EEGY+VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDLKSILIIGAGPIVIGQACEFDYSGAQACKALREEGYKVILVNSNPATIMTDPEMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  + VE+++ KERPDA+LPTMGGQTALN A+ LA +G L KY VELIGA  DA
Sbjct: 63   VTYIEPIMWQTVEKIIAKERPDAILPTMGGQTALNCALDLARNGVLAKYNVELIGATEDA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  FK+AM+ IG+  P S + +T++E ++   ++G FP +IRP+FT+GG+GGGI
Sbjct: 123  IDKAEDRGRFKEAMEKIGLSCPRSFVCHTMNEALAAQEQVG-FPTLIRPSFTMGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYNK+EF AIC+ G  AS T ++L+E+S+LGWKEYE+EV+RD ADN +IICSIEN DPMG
Sbjct: 182  AYNKDEFLAICERGFDASPTHELLIEQSVLGWKEYEMEVVRDKADNCIIICSIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGV+ GGSNVQFAVNP +GE++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQIMRNASLAVLREIGVDTGGSNVQFAVNPENGEMIVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VG++LD++ NDIT  +TPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGFTLDELRNDITGGRTPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            FAFEKFP ++  LTTQMKSVGE MA+GRT QESFQKALR LE G  G+   +      D 
Sbjct: 362  FAFEKFPAADDRLTTQMKSVGEVMAMGRTIQESFQKALRGLETGLCGFNPRS-----EDK 416

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
             +++  L  P P+RM  +  A + G  ++EIHE+  ID WFL Q ++L+  EQ +    +
Sbjct: 417  AEIRRELANPGPERMLFVADAFRAGFTLEEIHEICAIDPWFLAQIEDLVKEEQQVSAGCL 476

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
             ++       +KR+GFSDK+IA      EKEVRE R +L + P YKRVDTCAAEF   T 
Sbjct: 477  QDLDFAALRRLKRKGFSDKRIAQLLGVKEKEVREHRYALKLHPVYKRVDTCAAEFATETA 536

Query: 627  YMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSN 686
            Y+YS+Y+ ECE+ P+ +KKV+ILGGGPNRIGQGIEFDYCC H + +L+ +G+ETIM+N N
Sbjct: 537  YLYSTYEEECEARPSDRKKVMILGGGPNRIGQGIEFDYCCVHAALALRESGFETIMVNCN 596

Query: 687  PETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHR 746
            PETVSTD+DTSDRLYFEPLT+EDVL ++  E P G+IV +GGQTPLKL+           
Sbjct: 597  PETVSTDFDTSDRLYFEPLTLEDVLEIVRTENPWGVIVHYGGQTPLKLA----------- 645

Query: 747  LPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEIG 806
              +A  +  V I GTS DSIDAAEDRERF  ++ +L + QP   IA +E +AL  A+EIG
Sbjct: 646  --NALVENGVNIIGTSADSIDAAEDRERFQKVLNDLGLRQPPNRIAHNEEEALVKAEEIG 703

Query: 807  YPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALAD 866
            YP+VVRPSYVLGGRAM++V++ E L  Y+  AV+V  + PVL+D +L++AIE+DVD ++D
Sbjct: 704  YPLVVRPSYVLGGRAMQVVHSAEELQKYMREAVQVSEDSPVLLDFFLNNAIEVDVDCVSD 763

Query: 867  SCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNC 926
               +VVIGGIM+H+EQAG+HSGDS C +P  ++S    D I   T  +A  L V GLMN 
Sbjct: 764  G-KDVVIGGIMQHVEQAGIHSGDSGCSLPPYSLSEEIQDEIRRQTKAMAYALGVVGLMNV 822

Query: 927  QYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPKH 986
            Q+A+   G V++LE NPRASRTVPFVSKA G PLAK  A  M+G SL + G  KEV+P  
Sbjct: 823  QFAV-QDGVVFVLEVNPRASRTVPFVSKATGVPLAKVGARCMAGISLQEQGVEKEVVPDF 881

Query: 987  VSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVFL 1046
             +VKEAV PF KF G D +LGPEMRSTGEVMG+  SF  A+ KAQ+ AG+++P +G +FL
Sbjct: 882  YAVKEAVFPFIKFPGVDTILGPEMRSTGEVMGVGASFGEAYLKAQLGAGERMPATGKIFL 941

Query: 1047 SLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVAN 1106
            S+ +  KP + + A+ F  +G+ + +T GTA +L+  G+ V+ V K+ EGRPH  D + N
Sbjct: 942  SVREEDKPLIVKTAQNFQALGYGVCATRGTAGYLKEHGVVVQAVNKVPEGRPHIVDAIKN 1001

Query: 1107 GQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTV 1162
            G+I ++V T +       D   +RR  L  +VP  TTV+G  A +E +++L S  V
Sbjct: 1002 GEIALVVNTVASSPQSVADSHSIRRSALTQRVPQYTTVAGGEAMSEGVKNLNSTNV 1057


>gi|381168525|ref|ZP_09877719.1| carbamoyl phosphate synthase, large subunit [Phaeospirillum
            molischianum DSM 120]
 gi|380682385|emb|CCG42537.1| carbamoyl phosphate synthase, large subunit [Phaeospirillum
            molischianum DSM 120]
          Length = 1085

 Score = 1261 bits (3263), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 646/1100 (58%), Positives = 794/1100 (72%), Gaps = 37/1100 (3%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILI+GAGPIVIGQACEFDYSG QACKALKEEGY VIL+NSNPATIMTDPGLAD
Sbjct: 3    KRTDIKSILIIGAGPIVIGQACEFDYSGVQACKALKEEGYRVILVNSNPATIMTDPGLAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TY+ P+TP+ V +++EKERPDALLPTMGGQTALN A+ LA+ G LEKYGVE+I AK D 
Sbjct: 63   ATYVEPITPDFVTRIIEKERPDALLPTMGGQTALNTAMKLADMGVLEKYGVEMIAAKRDV 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR LF+ AM  IG+ +P S +  TL E       IG  P IIRP+FTL GTGGGI
Sbjct: 123  IAKAEDRLLFRDAMDKIGLDSPRSRLVRTLAEAREAMPIIG-LPAIIRPSFTLAGTGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN  E+E I   GLAAS   +VLVE+S+LGWKEYE+EV+RD  DN +IICSIENVDPMG
Sbjct: 182  AYNVAEYEQIVAGGLAASPVHEVLVEESVLGWKEYEMEVVRDRKDNCIIICSIENVDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPA TLTDKEYQ +R+ SIA++REIGV+ GGSNVQFAVNP DG + VIEMN
Sbjct: 242  VHTGDSITVAPALTLTDKEYQIMRNASIAVLREIGVDTGGSNVQFAVNPKDGRMTVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRF 447
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT  TPASFEP+IDYVVTKIPRF
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGYTLDELANDITGVTPASFEPTIDYVVTKIPRF 361

Query: 448  AFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWG-----CSNVKEL 502
             FEKFPG++  LTT MKSVGEAMA+GRTFQES QK LRS+E G +G        SN  ++
Sbjct: 362  TFEKFPGADTNLTTSMKSVGEAMAIGRTFQESLQKGLRSMETGLTGLDDIEIPGSNAGDM 421

Query: 503  DWDWEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLL 562
                + +K +L  P  DR+  I  A + G+ +DE+H   F DKWFL Q K +I+ E+ + 
Sbjct: 422  K---DAVKKALAQPRHDRILVIAQAFRLGLTIDEVHSACFYDKWFLGQIKGIIEAEEEVR 478

Query: 563  TQSVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFE 622
               +  +       +K+ GFSD++++  +  T  E   +R    V P YKR+DTCAAEF 
Sbjct: 479  ANGLP-IDAPGLLRLKKMGFSDQRLSALSGKTLTETAFRREVFNVKPVYKRIDTCAAEFP 537

Query: 623  ANTPYMYSSYDF------ECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSA 676
            ++T YMYS Y+       ECES PT + KV+ILGGGPNRIGQGIEFDYCC H +++L+ A
Sbjct: 538  SSTAYMYSCYEGDGTNPPECESEPTNRDKVVILGGGPNRIGQGIEFDYCCVHAAYALEEA 597

Query: 677  GYETIMMNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLE----RPEGIIVQFGGQTPL 732
            G ETIM+N NPETVSTDYDTSDRLYFEPLT E V++++ +E    R  G IVQFGGQTPL
Sbjct: 598  GKETIMVNCNPETVSTDYDTSDRLYFEPLTAETVIDLVKVEQRNGRVLGCIVQFGGQTPL 657

Query: 733  KLSLPIHQYLDEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIA 792
            KL+         H L  A     + I GTSPDSID AEDRERF  +++EL+++QP  G A
Sbjct: 658  KLA---------HALEQAG----IPILGTSPDSIDLAEDRERFQHLLQELNLKQPANGTA 704

Query: 793  KSEADALAIAKEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKY 852
            +S  +A AIA  IGYPVV+RPS+VLGGRAM+IVY  E L  Y+  AV V  + PVLID Y
Sbjct: 705  RSLEEAKAIADRIGYPVVIRPSFVLGGRAMQIVYDYEALERYMREAVVVSGDNPVLIDLY 764

Query: 853  LSDAIEIDVDALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTI 912
            L DAIEIDVDAL+D    V + GIM+HIE+AG+HSGDSAC +P  +I  + ++ +   T+
Sbjct: 765  LKDAIEIDVDALSDGT-QVYVAGIMQHIEEAGIHSGDSACSLPPYSIDHATIEELERQTV 823

Query: 913  KLAKRLNVCGLMNCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKS 972
             LAK L V GLMN QYAI   G VY+LE NPRASRTVPFV+KA G P+AK AA VM+G++
Sbjct: 824  ALAKALGVIGLMNIQYAI-KDGTVYILEVNPRASRTVPFVAKATGVPIAKIAARVMAGET 882

Query: 973  LNDLGFTKEVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQI 1032
            L   G T   + KHV+VKEAV PF +F G D+LLGPEM+STGEVMGID  F  AFAK+Q+
Sbjct: 883  LASFGLTTRPVMKHVAVKEAVFPFARFPGVDILLGPEMKSTGEVMGIDSDFARAFAKSQL 942

Query: 1033 AAGQKLPLSGTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVL- 1091
             AG  LP+ G VFLS+ +  KP +  IA+  L +GF +++T GTA +L   GI    +L 
Sbjct: 943  GAGTNLPIEGGVFLSVKEGDKPSMVDIARRLLGMGFTVMATDGTARYLREHGIRNIGILN 1002

Query: 1092 KMHEGRPHAGDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANA 1151
            K+ EGRPH  D + NGQI ++V T+ G    + D   +R   L + +P  TTV+GA A  
Sbjct: 1003 KVLEGRPHCVDAMMNGQIHLVVNTTEGSQAVK-DSFSIRHTALTHNIPHYTTVAGARAAV 1061

Query: 1152 EAIRSLKSNTVTMTALQDFF 1171
            EAI +L+  T+ +  LQ +F
Sbjct: 1062 EAIEALRCGTLDVAPLQSYF 1081


>gi|350562023|ref|ZP_08930860.1| carbamoyl-phosphate synthase, large subunit [Thioalkalivibrio
            thiocyanoxidans ARh 4]
 gi|349780341|gb|EGZ34676.1| carbamoyl-phosphate synthase, large subunit [Thioalkalivibrio
            thiocyanoxidans ARh 4]
          Length = 1079

 Score = 1261 bits (3262), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 638/1097 (58%), Positives = 812/1097 (74%), Gaps = 24/1097 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ +LILGAGPIVIGQACEFDYSG QACKAL+EEG+ VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIQSVLILGAGPIVIGQACEFDYSGAQACKALREEGFRVILVNSNPATIMTDPEMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
              YI P+   +V +V+EKERPDALLPTMGGQTALN A+ LA+ G LE+YGVELIGA  DA
Sbjct: 63   AVYIEPVDWRVVARVIEKERPDALLPTMGGQTALNCALDLAKQGVLEQYGVELIGANEDA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I  AEDRD F+QAM  IG+ TP + I ++ ++   +  EIG FP+IIRP+FTLGG+GGGI
Sbjct: 123  IDMAEDRDRFRQAMTEIGLATPTAFIAHSWEDAQKVQPEIG-FPVIIRPSFTLGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEFE I K GL  S T++VL+E+S+LGWKE+E+EV+RD ADN +IICSIEN DPMG
Sbjct: 182  AYNREEFEEIVKGGLDLSPTNEVLLEESVLGWKEFEMEVVRDQADNCIIICSIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ LR+ SIA++R+IGVE GGSNVQFAVNP DG ++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQILRNASIAVLRKIGVETGGSNVQFAVNPDDGRLIVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKK-TPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ N+IT   TPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGYTLDELRNEITGGLTPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            F FEKFP ++  LTTQMKSVGE MA+GRTFQES QKALR LE G  G         D   
Sbjct: 362  FTFEKFPQAQARLTTQMKSVGEVMAIGRTFQESLQKALRGLEIGVDGLDEKVDLNADDVV 421

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
            E+L+  L  P P+R+  +  A + G+ ++++  L+ ID+WFL Q  +LI++E+ +  + +
Sbjct: 422  ERLRTLLANPGPERVFNVADAFRAGLSIEDVFALTAIDRWFLAQVHQLIEIERGVRDRFL 481

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
            ++++  + +++KRRGFSD+++A     TEK VR++R +LGV P YKRVDTCAAEF   T 
Sbjct: 482  NDLSAAELFDLKRRGFSDRRLARLLNETEKAVRKQRHALGVHPVYKRVDTCAAEFATTTA 541

Query: 627  YMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSN 686
            Y+YS+Y+ E E+ PT ++K+++LGGGPNRIGQGIEFDYCC H + +++  GYETIM+N N
Sbjct: 542  YLYSTYEEENEAEPTDREKIMVLGGGPNRIGQGIEFDYCCVHAALAMREDGYETIMVNCN 601

Query: 687  PETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHR 746
            PETVSTDYDTSDRLYFEPLT+EDVL V+ +E+P+G+IVQ+GGQTPLKL+          R
Sbjct: 602  PETVSTDYDTSDRLYFEPLTLEDVLEVVAVEQPKGVIVQYGGQTPLKLA----------R 651

Query: 747  LPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEIG 806
               A+G   V I GTSPDSID AEDRERF  ++++L + QP    A+SE +A  +A EIG
Sbjct: 652  DLEAAG---VPIIGTSPDSIDLAEDRERFQHLLQKLDLRQPPNRTARSEDEAEKLAAEIG 708

Query: 807  YPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALAD 866
            YP+VVRPSYVLGGRAMEIV  +  L  Y+ +AV V  + PVL+D++L DAIE+DVDA+ D
Sbjct: 709  YPLVVRPSYVLGGRAMEIVRDESDLKRYMRDAVSVSNDAPVLLDRFLDDAIEVDVDAICD 768

Query: 867  SCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNC 926
               +V IGGIMEHIEQAGVHSGDSAC +P  ++     D ++    ++A  L V GLMN 
Sbjct: 769  G-QDVFIGGIMEHIEQAGVHSGDSACSLPPFSLPDHLQDEMAEQVRRMALGLKVVGLMNT 827

Query: 927  QYAITTSGD-VYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPK 985
            Q+AI   GD +++LE NPRASRTVPFVSK +G PLAK AA  M+G+SL        V P 
Sbjct: 828  QFAI--QGDNIFVLEVNPRASRTVPFVSKVVGLPLAKIAARCMAGQSLKSQDLHAPVRPD 885

Query: 986  HVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVF 1045
            + +VKEAV PF KF G D +LGPEM+STGEVMG+  SF  AFAK+Q+ AG +LP  G  F
Sbjct: 886  YYAVKEAVFPFAKFPGVDPILGPEMKSTGEVMGVGRSFAEAFAKSQLGAGVRLPARGKAF 945

Query: 1046 LSLNDLTKPH-LERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMV 1104
            +S+ D+ K   L ++ +   ++GF++++T GTA FL+ +G+ V  V K+ EGRPH  DM+
Sbjct: 946  VSVRDIDKSSALAKVGRRLGELGFEVLATRGTAAFLQEQGVEVTVVNKVTEGRPHIVDMI 1005

Query: 1105 ANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTVTM 1164
             N +I  +V T  G      D   +RR  L +KV   TT++GALA  +A+  L+   V  
Sbjct: 1006 KNDEISFIVNTVEGKQA-TADSYTIRREALMHKVSYTTTIAGALATVQALDHLEFENVFR 1064

Query: 1165 TALQDFFDVETASGSSE 1181
              LQD  D E   G SE
Sbjct: 1065 --LQDLHD-EALRGRSE 1078


>gi|317486857|ref|ZP_07945669.1| carbamoyl-phosphate synthase [Bilophila wadsworthia 3_1_6]
 gi|345887030|ref|ZP_08838236.1| carbamoyl-phosphate synthase large subunit [Bilophila sp. 4_1_30]
 gi|316921896|gb|EFV43170.1| carbamoyl-phosphate synthase [Bilophila wadsworthia 3_1_6]
 gi|345037713|gb|EGW42230.1| carbamoyl-phosphate synthase large subunit [Bilophila sp. 4_1_30]
          Length = 1079

 Score = 1261 bits (3262), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 635/1095 (57%), Positives = 811/1095 (74%), Gaps = 26/1095 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTDL+KI+++G+GPIVIGQACEFDYSGTQ  KALKEEGYEV+L+NSNPATIMTDPGLAD
Sbjct: 3    KRTDLKKIMVIGSGPIVIGQACEFDYSGTQGIKALKEEGYEVVLVNSNPATIMTDPGLAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
            RTYI P+ PE V  ++ KERP A+LPT+GGQT LN A+ALA+SG L + G ELIGA+ + 
Sbjct: 63   RTYIEPIEPETVAAIVRKERPCAILPTLGGQTGLNTALALAKSGVLAECGTELIGARAEV 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I+KAE R+LF+QAM+ IG+K P S I + +D+   I + +  FP+IIRPAFTLGGTGGGI
Sbjct: 123  IEKAESRELFRQAMENIGLKVPQSAIAHNMDDVRRIGSSM-PFPMIIRPAFTLGGTGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN E+ E I   GL AS  S+V++E+S++GWKE+E+EVMRD ADN VI+CSIENVD MG
Sbjct: 182  AYNMEDLEEIAGDGLTASPVSEVMIEQSVIGWKEFEMEVMRDTADNCVIVCSIENVDAMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTD+EYQ++RD S+AI+REIGVE GGSNVQF VNP +GE+++IEMN
Sbjct: 242  VHTGDSITVAPAQTLTDREYQKMRDASLAIMREIGVETGGSNVQFGVNPANGELVIIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRF 447
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT++T ASFEP+IDY V KIPRF
Sbjct: 302  PRVSRSSALASKATGFPIAKIAAKLAVGYTLDELRNDITRETSASFEPTIDYCVVKIPRF 361

Query: 448  AFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDWE 507
             FEKFPG++  LTT MKSVGE MA+GRTF+ES QK LRSLE G  G G SN +      E
Sbjct: 362  TFEKFPGAKDELTTSMKSVGETMAIGRTFKESLQKGLRSLEIGAIGLG-SNFRAALPSRE 420

Query: 508  QLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSVS 567
            +L   LR PN  RM AI  AM  G  ++E+HE++ ID WFL Q KE++D+E  +   +++
Sbjct: 421  ELMGKLRTPNSRRMFAIRQAMLVGFTLEELHEITLIDPWFLRQIKEIVDMEGQIRDFALA 480

Query: 568  N-MTKDD------FYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAE 620
            N MT D+        + K  GFSD+Q+A   K  E ++R  R   G +P+Y  VDTCAAE
Sbjct: 481  NSMTPDNPEMVAVLRKAKEFGFSDRQLAEMWKKPEGDIRALRRETGTVPTYYLVDTCAAE 540

Query: 621  FEANTPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYET 680
            FEA TPY YS+Y+   E  P  +KKV+ILGGGPNRIGQGIEFDYCCCH SF+L+ AG + 
Sbjct: 541  FEAYTPYFYSTYETGQEVVPADRKKVIILGGGPNRIGQGIEFDYCCCHASFALKDAGVQA 600

Query: 681  IMMNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQ 740
            IM+NSNPETVSTDYDTSDRLYFEPLT EDV+++++ ERP+G+IVQFGGQTPL L++P+ +
Sbjct: 601  IMVNSNPETVSTDYDTSDRLYFEPLTFEDVMHIVEKERPDGVIVQFGGQTPLNLAVPLLR 660

Query: 741  YLDEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALA 800
                           V I GTSPD+ID AEDRERF A++++LS+ QP  G A +  ++  
Sbjct: 661  -------------AGVPILGTSPDAIDRAEDRERFQALLQKLSLLQPANGTATTLEESRE 707

Query: 801  IAKEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAV-EVDPERPVLIDKYLSDAIEI 859
            IA  IGYP+V+RPSYVLGGRAM IVY DE +  Y    V +   E PVLIDK+L +AIE+
Sbjct: 708  IAHRIGYPIVIRPSYVLGGRAMMIVYDDEEMAEYFALHVGKQKLEHPVLIDKFLENAIEV 767

Query: 860  DVDALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLN 919
            DVDAL+D   +V + G+MEHIE+AG+HSGDS+C++P  ++ +  +  I   T+ LAK L 
Sbjct: 768  DVDALSDG-EDVYVAGVMEHIEEAGIHSGDSSCVLPPYSLPAETVAEIERQTVALAKELR 826

Query: 920  VCGLMNCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFT 979
            V GLMN Q+A+   G V++LE NPRASRT PFVSKA G PL + A  VM GK+L +L   
Sbjct: 827  VVGLMNIQFAV-KDGVVFILEVNPRASRTAPFVSKATGVPLPRLATQVMLGKTLKELDPW 885

Query: 980  KEVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLP 1039
                  +VSVKE+V PF +F G D+LLGPEMRSTGEVMGI  +F  AF K Q  AGQKLP
Sbjct: 886  SMRRSGYVSVKESVFPFRRFPGVDILLGPEMRSTGEVMGIAPTFEEAFLKGQWGAGQKLP 945

Query: 1040 LSGTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPH 1099
              G VFLS+ND  K  +  +A+ ++D+GF++++TSGTA  L  +GI   RVLK++EGRP+
Sbjct: 946  EGGKVFLSVNDRDKRFVAEVARQYVDLGFELLATSGTAGLLAGQGIPSTRVLKVYEGRPN 1005

Query: 1100 AGDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKS 1159
              D++ NG++ +++ T+SG      D   +R+  L Y VP  TT+SGA A A AI + ++
Sbjct: 1006 IVDLIKNGEVSLVINTASGKRTAH-DSKAIRQATLHYGVPYSTTLSGAKAIARAIGAART 1064

Query: 1160 NTVTMTALQDFFDVE 1174
              V + +LQ+++  E
Sbjct: 1065 TEVRVKSLQEYYKGE 1079


>gi|83309801|ref|YP_420065.1| carbamoyl phosphate synthase large subunit [Magnetospirillum
            magneticum AMB-1]
 gi|82944642|dbj|BAE49506.1| Carbamoylphosphate synthase large subunit [Magnetospirillum
            magneticum AMB-1]
          Length = 1085

 Score = 1261 bits (3262), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 638/1103 (57%), Positives = 800/1103 (72%), Gaps = 43/1103 (3%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILI+GAGPIVIGQACEFDYSG QACKALK+EGY VIL+NSNPATIMTDPGLAD
Sbjct: 3    KRTDIKSILIIGAGPIVIGQACEFDYSGVQACKALKDEGYRVILVNSNPATIMTDPGLAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+TPE+V +++EKERPDALLPTMGGQTALN A+ LA+ G LEK+GVE+I AK D 
Sbjct: 63   ATYIEPITPEIVAKIIEKERPDALLPTMGGQTALNTAMKLADMGILEKFGVEMIAAKRDV 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR LF+ AM  IG+++P S +  TL E     + +G  P IIRP+FTL GTGGGI
Sbjct: 123  IAKAEDRLLFRDAMDKIGLESPKSRMVKTLQEAREALDFVG-LPAIIRPSFTLAGTGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN  E+E I   GLAAS   +VLVE+S+LGWKEYE+EV+RD  DN +IICSIENVDPMG
Sbjct: 182  AYNVAEYEHIVSGGLAASPVHEVLVEESVLGWKEYEMEVVRDKKDNCIIICSIENVDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPA TLTDKEYQ +R+ S+A++REIGV+ GGSNVQFAVNP DG + VIEMN
Sbjct: 242  VHTGDSITVAPALTLTDKEYQIMRNASLAVLREIGVDTGGSNVQFAVNPKDGRMTVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRF 447
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT  TPASFEP+IDYVVTKIPRF
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGYTLDELTNDITGCTPASFEPTIDYVVTKIPRF 361

Query: 448  AFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGW--------GCSNV 499
             FEKFPG++P LTT MKSVGEAMA+GRTFQES QK LRS+E G +G         G  ++
Sbjct: 362  TFEKFPGADPNLTTSMKSVGEAMAIGRTFQESLQKGLRSMETGLTGLDEVEIPGAGAGDM 421

Query: 500  KELDWDWEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQ 559
            K      + +K +L  P  DR+  I  A + G+ +DE+H   F DKWFL Q K ++D E 
Sbjct: 422  K------DAVKSALAQPRHDRLLVIAQAFRFGLTIDEVHAACFYDKWFLAQLKGIVDAEA 475

Query: 560  FLLTQSVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAA 619
             +  + +  +       +K+ GFSD+++A  +  +  E   +R  L V P +KR+DTCAA
Sbjct: 476  EIRAKGLP-IDAPGLLRLKKMGFSDQRLAKLSGKSLVETAFRREVLNVKPVFKRIDTCAA 534

Query: 620  EFEANTPYMYSSYDF------ECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSL 673
            EF ++T YMYS Y+       ECES P+ + KV+ILGGGPNRIGQGIEFDYCC H +++L
Sbjct: 535  EFPSSTAYMYSCYEGDGVNPPECESDPSDRDKVIILGGGPNRIGQGIEFDYCCVHAAYAL 594

Query: 674  QSAGYETIMMNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPE----GIIVQFGGQ 729
              AG ETIM+N NPETVSTDYDTSDRLYFEPLT E V++++  E+      G IVQFGGQ
Sbjct: 595  DEAGKETIMVNCNPETVSTDYDTSDRLYFEPLTAETVIDLVRKEQSNGKVLGCIVQFGGQ 654

Query: 730  TPLKLSLPIHQYLDEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKG 789
            TPLKL+         H L  A     + I GTSPDSID AEDRERF  ++ +L ++QP  
Sbjct: 655  TPLKLA---------HALEQAG----IPILGTSPDSIDLAEDRERFQKMLHQLGLKQPAN 701

Query: 790  GIAKSEADALAIAKEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLI 849
            G A+S  +A+ +A++IGYPVV+RPS+VLGGRAM+IVY  E L  Y+  AV+V  + PVLI
Sbjct: 702  GTARSLEEAIKVAEKIGYPVVIRPSFVLGGRAMQIVYDHEALERYMVEAVKVSGDDPVLI 761

Query: 850  DKYLSDAIEIDVDALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISS 909
            D YL DAIE+DVDAL D    V + GIM+HIE+AG+HSGDSAC +P  ++  + +  +  
Sbjct: 762  DYYLKDAIEVDVDALCDG-NQVYVAGIMQHIEEAGIHSGDSACSLPPYSLDKATIAELER 820

Query: 910  WTIKLAKRLNVCGLMNCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMS 969
             T  +AK LNV GLMNCQYAI   GD+Y+LE NPRASRTVPFV+KA G P+AK AA VM+
Sbjct: 821  QTAAMAKALNVVGLMNCQYAI-KDGDIYILEVNPRASRTVPFVAKATGVPIAKIAARVMA 879

Query: 970  GKSLNDLGFTKEVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAK 1029
            G++L   G +     KHV+VKEAV PF +F G D+LLGPEM+STGEVMGID  F  AFAK
Sbjct: 880  GETLASFGLSTRPELKHVAVKEAVFPFARFPGVDILLGPEMKSTGEVMGIDSDFARAFAK 939

Query: 1030 AQIAAGQKLPLSGTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGI-AVE 1088
            +Q+ AG  LP  G  F+S+ D  KP +  IA+  L++GFK+++T GTA +L+ +G+  V 
Sbjct: 940  SQLGAGTNLPTEGGAFISVRDGDKPAMVEIARRLLEMGFKVMATDGTAFYLKDRGVTGVT 999

Query: 1089 RVLKMHEGRPHAGDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGAL 1148
             V K+ EGRPH  D + NGQ+Q++V T+ G    + D   +RR  L   +P  TTV+GA 
Sbjct: 1000 IVNKVLEGRPHCVDAMMNGQVQLVVNTTEGSQAVK-DSFSIRRTALTNNIPHYTTVAGAR 1058

Query: 1149 ANAEAIRSLKSNTVTMTALQDFF 1171
            A  EAI +++  T+ +  LQ +F
Sbjct: 1059 AAVEAIEAMRCGTLDVAPLQSYF 1081


>gi|254427205|ref|ZP_05040912.1| carbamoyl-phosphate synthase, large subunit [Alcanivorax sp. DG881]
 gi|196193374|gb|EDX88333.1| carbamoyl-phosphate synthase, large subunit [Alcanivorax sp. DG881]
          Length = 1072

 Score = 1261 bits (3262), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 628/1084 (57%), Positives = 800/1084 (73%), Gaps = 20/1084 (1%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KR+DL+ ILI+GAGPIVIGQACEFDYSG QACKAL+EEG+ VIL+NSNPATIMTDP +AD
Sbjct: 3    KRSDLKSILIIGAGPIVIGQACEFDYSGAQACKALREEGFRVILVNSNPATIMTDPAMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+T + V +++EKERPDALLPTMGGQTALN A+ L  +G L+++GVE+IGA  DA
Sbjct: 63   ATYIEPITWQTVAKIIEKERPDALLPTMGGQTALNCALDLDHNGVLKEFGVEMIGATEDA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  F +AMK IG++ P S I + ++E  +   E+G FP IIRP+FT+GG+GGG+
Sbjct: 123  IDKAEDRSRFDKAMKAIGLECPRSAIAHNMEEASAALEELG-FPCIIRPSFTMGGSGGGV 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEFE IC+ GL  S T+++L+++SLLGWKEYE+EV+RD  DN +I+CSIEN DPMG
Sbjct: 182  AYNREEFEEICQRGLDLSPTNELLIDESLLGWKEYEMEVVRDKKDNCIIVCSIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKE Q +RD S+A++REIGVE GGSNVQF +NP +G ++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKELQIMRDASLAVLREIGVETGGSNVQFGINPDNGRMVVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITK-KTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ N+IT  KTPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGYTLDELQNEITGGKTPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            F FEKF  ++ +LTTQMKSVGE MA+GR FQES QKALR LE    G+            
Sbjct: 362  FNFEKFAEADAVLTTQMKSVGEVMAIGRNFQESVQKALRGLETESIGFDPHVDPAAPDAR 421

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
            EQ+   L  P P+R+  +  A + GM VD++  ++ ID+W+L Q ++LI  EQ L   + 
Sbjct: 422  EQVAQLLSTPGPERIWIVGDAFRVGMTVDDVFNITKIDRWYLVQIEDLIRAEQQLADSTF 481

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
            S +T+D  Y +KR+GFSD ++A      E +VR KR  LGV+P YKRVDTCAAEF  +T 
Sbjct: 482  SGLTRDSLYALKRKGFSDARLAQLLGVKEADVRGKREELGVLPIYKRVDTCAAEFATDTA 541

Query: 627  YMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSN 686
            YMYSSYD ECE+ PT + K++++GGGPNRIGQGIEFDYCC H +F+++  GYE IM+N N
Sbjct: 542  YMYSSYDEECEANPTDRDKIMVIGGGPNRIGQGIEFDYCCVHAAFAMKDDGYEAIMVNCN 601

Query: 687  PETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHR 746
            PETVSTDYDTSDRLYFEP+T+EDVL ++  E+P+G+IVQ+GGQTPLKL+          R
Sbjct: 602  PETVSTDYDTSDRLYFEPITLEDVLAIVAKEKPKGVIVQYGGQTPLKLA----------R 651

Query: 747  LPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEIG 806
               A+G   V I GT PD+ID AEDRERF  ++ +L ++QP    A+S  D + +A+EIG
Sbjct: 652  ALQAAG---VPIIGTPPDAIDEAEDRERFQQMVNKLGLKQPPNRTARSMEDGVRLAEEIG 708

Query: 807  YPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALAD 866
            YP+VVRPSYVLGGRAMEIVY++  L  Y+ NAV V  + PVL+D++L DAIE+DVDA+ D
Sbjct: 709  YPLVVRPSYVLGGRAMEIVYSEAELRNYMMNAVSVSNDSPVLLDRFLDDAIEVDVDAVCD 768

Query: 867  SCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNC 926
               +VVIGGIM+HIEQAGVHSGDSAC +P  ++     D +      +A  L V GLMN 
Sbjct: 769  GT-DVVIGGIMQHIEQAGVHSGDSACSLPPYSLDDDVQDVMRQQAADMALELGVVGLMNV 827

Query: 927  QYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPKH 986
            Q+A+  SG+VY+LE NPRASRTVP+VSK IG  LAK AA  M+G SL + GFTKEV P+H
Sbjct: 828  QFAV-KSGEVYVLEVNPRASRTVPYVSKCIGVSLAKVAARCMAGTSLKEQGFTKEVKPQH 886

Query: 987  VSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVFL 1046
              VKEAV PF KF   D +LGPEM+STGEVMG+  +F  AF KA + AG+KLP +GT F+
Sbjct: 887  YFVKEAVFPFAKFPKVDPILGPEMKSTGEVMGVGATFAEAFGKASLGAGEKLPETGTAFI 946

Query: 1047 SLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVAN 1106
            S+ ++ KP    +A+  ++ GF +V+T GTA  L   G+ V+ V K+ EGRPH  DM+ N
Sbjct: 947  SVREVDKPASVEVARMLIERGFSLVATKGTAKVLGEAGLEVKVVNKVLEGRPHIVDMIKN 1006

Query: 1107 GQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTVTMTA 1166
             QI ++V T+ G    + D   +RR  L +KV   TT++ A A  +A+    S   T+  
Sbjct: 1007 DQIALIVNTTEGKQATR-DSFAIRRSALQHKVFYTTTIAAAHAVCQALGI--SGEPTVRR 1063

Query: 1167 LQDF 1170
            LQD 
Sbjct: 1064 LQDL 1067


>gi|161485715|ref|NP_642188.2| carbamoyl phosphate synthase large subunit [Xanthomonas axonopodis
            pv. citri str. 306]
 gi|22095491|sp|P58942.1|CARB_XANAC RecName: Full=Carbamoyl-phosphate synthase large chain; AltName:
            Full=Carbamoyl-phosphate synthetase ammonia chain
          Length = 1080

 Score = 1261 bits (3262), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 627/1073 (58%), Positives = 802/1073 (74%), Gaps = 21/1073 (1%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTDL  ILI+GAGPIVIGQACEFDYSG QACKAL++EGY V+L+NSNPATIMTDP +AD
Sbjct: 3    KRTDLETILIIGAGPIVIGQACEFDYSGAQACKALRDEGYRVVLVNSNPATIMTDPNMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
              YI P+  + VE+++ KE+PDALLPTMGGQTALN A+ LA+ G LEKY VELIGAK +A
Sbjct: 63   AVYIEPINWQTVEKIIAKEKPDALLPTMGGQTALNCALDLADHGVLEKYNVELIGAKREA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I+ AEDR+LF+ AM  IG+  P + + +TL+E + I   +G +P IIRP+FTLGG+GGGI
Sbjct: 123  IRMAEDRELFRVAMGEIGLDCPTAAVAHTLEEALEIQTRVG-YPTIIRPSFTLGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EE   I   GL  S T++VLVE+S+LGWKE+E+EV+RD ADN +I+C+IEN+DPMG
Sbjct: 182  AYNREELIEIVGRGLELSPTTEVLVEESVLGWKEFEMEVVRDTADNCIIVCAIENLDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQRLRD SIA++R+IGV+ GGSNVQF ++P  G V+VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQRLRDASIAVLRKIGVDTGGSNVQFGISPTTGRVVVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKK-TPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ N+IT   TPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGYTLDELKNEITGGLTPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVK-ELDWD 505
            FAFEKFP ++  LTTQMKSVGE MA+GRTF ES QKALR LE G  G   + +    + D
Sbjct: 362  FAFEKFPQADARLTTQMKSVGEVMAMGRTFSESLQKALRGLETGKIGLDPTGLDLSSEDD 421

Query: 506  WEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQS 565
               LK  L+ P P+R+  +  A + GM V +++ LSFID WFL Q +E++  EQ L    
Sbjct: 422  IATLKRELKAPGPERLFYVADAFRAGMTVADVYALSFIDPWFLDQIEEIVSHEQQLADDG 481

Query: 566  VSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANT 625
            ++ +       +KR GFSD ++A    S E+ VR  R +L V P YKRVD+CAAEF  +T
Sbjct: 482  MAALDAPRLRMLKRAGFSDARMAQLIGSNEESVRTLRRALKVRPVYKRVDSCAAEFATST 541

Query: 626  PYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNS 685
             Y+YS+Y+ ECE+ PT + K++ILGGGPNRIGQGIEFDYCC H + +L+  G+ETIM+N 
Sbjct: 542  AYLYSTYEDECEALPTDRDKIMILGGGPNRIGQGIEFDYCCVHAALALRDDGFETIMVNC 601

Query: 686  NPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEH 745
            NPETVSTDYDTSDRLYFEPLT+EDVL +++LE+P+G+IVQ+GGQTPLKL+          
Sbjct: 602  NPETVSTDYDTSDRLYFEPLTLEDVLEIVELEKPKGVIVQYGGQTPLKLA---------- 651

Query: 746  RLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEI 805
            R   A+G   V + GTSPDSID AEDRERF  ++ +L ++QP   IA++  +AL +A+EI
Sbjct: 652  RALEANG---VPVIGTSPDSIDLAEDRERFQQLVDKLGLKQPPNRIARNAEEALVLAREI 708

Query: 806  GYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALA 865
            GYP+VVRPSYVLGGRAMEIVY +  L  Y+ +AV+V  + PVL+D++L +A+E+DVD +A
Sbjct: 709  GYPLVVRPSYVLGGRAMEIVYGESDLARYVRDAVKVSNDSPVLLDRFLDNAVEVDVDIIA 768

Query: 866  DSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMN 925
            D  GNV+IGG+MEHIE+AGVHSGDS+C +P  ++S      +    + LA+ LNV GLMN
Sbjct: 769  DKDGNVLIGGVMEHIEEAGVHSGDSSCSLPPYSLSPQTQAELRRQVVMLAEGLNVVGLMN 828

Query: 926  CQYAITT--SGD--VYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKE 981
             Q+A+    +GD  VYLLE NPRASRTVPFVSKAIG PLAK AA  M+GK+L + G TKE
Sbjct: 829  TQFAVQVNEAGDDIVYLLEVNPRASRTVPFVSKAIGMPLAKIAARCMAGKTLAEQGATKE 888

Query: 982  VIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLS 1041
            ++P + SVKEA+ PF KFQG D +LGPEMRSTGEVMG+  SF  AFA+AQ A G K P  
Sbjct: 889  IVPDYYSVKEAIFPFAKFQGVDPILGPEMRSTGEVMGVGRSFSAAFARAQEAGGIKAPPL 948

Query: 1042 GTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAG 1101
            G  F+S+ D  K  +  +A+A ++ GF +V+T GT  +L+  G++ E V K+ EGRPH  
Sbjct: 949  GKAFVSVRDPDKQRVLPVAQALVERGFTLVATRGTGAWLQQNGLSCEIVNKVAEGRPHIV 1008

Query: 1102 DMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAI 1154
            D + NG+I  +V T+ G +    D   +RR  L ++V   TTV+GA A  +++
Sbjct: 1009 DSIKNGEIVYIVNTTEGRAAIS-DSFSIRREALQHRVTYSTTVAGAKALVQSL 1060


>gi|21231291|ref|NP_637208.1| carbamoyl phosphate synthase large subunit [Xanthomonas campestris
            pv. campestris str. ATCC 33913]
 gi|66768657|ref|YP_243419.1| carbamoyl phosphate synthase large subunit [Xanthomonas campestris
            pv. campestris str. 8004]
 gi|188991525|ref|YP_001903535.1| carbamoyl phosphate synthase large subunit [Xanthomonas campestris
            pv. campestris str. B100]
 gi|384427742|ref|YP_005637101.1| carbamoyl-phosphate synthase large subunit [Xanthomonas campestris
            pv. raphani 756C]
 gi|22095492|sp|P58943.1|CARB_XANCP RecName: Full=Carbamoyl-phosphate synthase large chain; AltName:
            Full=Carbamoyl-phosphate synthetase ammonia chain
 gi|21112944|gb|AAM41132.1| carbamoyl-phosphate synthase large chain [Xanthomonas campestris pv.
            campestris str. ATCC 33913]
 gi|66573989|gb|AAY49399.1| carbamoyl-phosphate synthase large chain [Xanthomonas campestris pv.
            campestris str. 8004]
 gi|167733285|emb|CAP51484.1| Carbamoyl-phosphate synthase large chain [Xanthomonas campestris pv.
            campestris]
 gi|341936844|gb|AEL06983.1| carbamoyl-phosphate synthase, large subunit [Xanthomonas campestris
            pv. raphani 756C]
          Length = 1080

 Score = 1260 bits (3261), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 629/1071 (58%), Positives = 802/1071 (74%), Gaps = 27/1071 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTDL+ ILI+GAGPIVIGQACEFDYSG QACKAL++EGY V+L+NSNPATIMTDP +AD
Sbjct: 3    KRTDLKTILIIGAGPIVIGQACEFDYSGAQACKALRDEGYRVVLVNSNPATIMTDPNMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
              YI P+  + VE+++ KE+PDALLPTMGGQTALN A+ LA+ G LEKY VELIGAK +A
Sbjct: 63   AVYIEPINWQTVEKIIAKEKPDALLPTMGGQTALNCALDLADHGVLEKYNVELIGAKREA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I+ AEDR+LF+ AM  IG+  P + + +TL+E + I   +G +P IIRP+FTLGG+GGGI
Sbjct: 123  IRMAEDRELFRVAMGEIGLDCPRAEVAHTLEEALDIQTRVG-YPTIIRPSFTLGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EE   I   GL  S T++VLVE+S+LGWKE+E+EV+RD ADN +I+C+IEN+DPMG
Sbjct: 182  AYNREELIDIVGRGLELSPTTEVLVEESVLGWKEFEMEVVRDTADNCIIVCAIENLDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQRLRD SIA++R+IGV+ GGSNVQF ++P  G V+VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQRLRDASIAVLRKIGVDTGGSNVQFGISPTTGRVVVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKK-TPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ N+IT   TPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGYTLDELKNEITGGLTPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDW-- 504
            FAFEKFP ++  LTTQMKSVGE MA+GRTFQES QKALR LE G  G   +    LD   
Sbjct: 362  FAFEKFPQADARLTTQMKSVGEVMAMGRTFQESLQKALRGLETGKIGLDPTG---LDLGS 418

Query: 505  --DWEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLL 562
              D   LK  L+ P P+R+  +  A + GM V +++ LSFID WFL Q +ELI +EQ L 
Sbjct: 419  EDDMAALKRELKAPGPERLFYVGDAFRAGMSVADVYALSFIDPWFLDQIEELISLEQQLA 478

Query: 563  TQSVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFE 622
               ++ +       +KR GFSD ++A    + E+ VR  R +L V P YKRVD+CAAEF 
Sbjct: 479  DDGMAALDAPRLRLLKRAGFSDARLAELIGTNEEAVRTLRRALKVRPVYKRVDSCAAEFA 538

Query: 623  ANTPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIM 682
             +T Y+YS+Y+ ECE+ P+ + K++ILGGGPNRIGQGIEFDYCC H + +L+  G+ETIM
Sbjct: 539  TSTAYLYSTYEDECEALPSNRDKIMILGGGPNRIGQGIEFDYCCVHAALALRDDGFETIM 598

Query: 683  MNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYL 742
            +N NPETVSTDYDTSDRLYFEPLT+EDVL +++LE+P+G+IVQ+GGQTPLKL+       
Sbjct: 599  VNCNPETVSTDYDTSDRLYFEPLTLEDVLEIVELEQPKGVIVQYGGQTPLKLA------- 651

Query: 743  DEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIA 802
               R   A+G   V + GTSPDSID AEDRERF  ++ +L ++QP   IA++  +AL +A
Sbjct: 652  ---RALEANG---VPVIGTSPDSIDLAEDRERFQQLVDKLGLKQPPNRIARNADEALVLA 705

Query: 803  KEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVD 862
            +EIGYP+VVRPSYVLGGRAMEIVY +  L  Y+ +AV+V  + PVL+D++L +A+E+DVD
Sbjct: 706  REIGYPLVVRPSYVLGGRAMEIVYGESDLARYVRDAVKVSNDSPVLLDRFLDNAVEVDVD 765

Query: 863  ALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCG 922
             +AD  GNV+IGG+MEHIE+AGVHSGDS+C +P  ++S+     +    + LA+ LNV G
Sbjct: 766  IIADKDGNVLIGGVMEHIEEAGVHSGDSSCSLPPYSLSAETQAELRRQVVMLAEGLNVVG 825

Query: 923  LMNCQYAITT--SGD--VYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGF 978
            LMN Q+A+    +GD  VYLLE NPRASRTVPFVSKA G PLAK AA  M+GK+L + G 
Sbjct: 826  LMNTQFAVQVNDAGDDIVYLLEVNPRASRTVPFVSKATGMPLAKIAARCMAGKTLAEQGA 885

Query: 979  TKEVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKL 1038
            TKE++P + SVKEA+ PF KFQG D +LGPEMRSTGEVMG+  SF  AFA+AQ A G K 
Sbjct: 886  TKEIVPDYYSVKEAIFPFAKFQGVDPILGPEMRSTGEVMGVGRSFGAAFARAQEAGGIKA 945

Query: 1039 PLSGTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRP 1098
            P  G  F+S+ D  K  +  +A+A ++ GF +V+T GT  +L+  G++ E V K+ EGRP
Sbjct: 946  PPLGKAFVSVRDPDKQRVLPVAQALVERGFTLVATRGTGAWLQQHGLSCEIVNKVAEGRP 1005

Query: 1099 HAGDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALA 1149
            H  D + NG+I  +V T+ G +    D   +RR  L ++V   TTV+GA A
Sbjct: 1006 HIVDSIKNGEIVYIVNTTEGRAAIS-DSFSIRREALQHRVTYSTTVAGAKA 1055


>gi|333906698|ref|YP_004480284.1| carbamoyl-phosphate synthase large subunit [Marinomonas posidonica
            IVIA-Po-181]
 gi|333476704|gb|AEF53365.1| carbamoyl-phosphate synthase, large subunit [Marinomonas posidonica
            IVIA-Po-181]
          Length = 1071

 Score = 1260 bits (3261), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 626/1068 (58%), Positives = 792/1068 (74%), Gaps = 18/1068 (1%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ +LILGAGPIVIGQACEFDYSG QACKAL+EEG+ VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIKSVLILGAGPIVIGQACEFDYSGAQACKALREEGFRVILVNSNPATIMTDPVMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  + VE+++EKERPDA+LPTMGGQTALN A+ L   G LEKY VE+IGA  DA
Sbjct: 63   ATYIEPIEWKTVEKIIEKERPDAVLPTMGGQTALNCALDLERHGVLEKYNVEMIGATADA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR+ F QAMK+IG++ P +GI + ++E + +  E+G FP IIRP+FT+GGTGGGI
Sbjct: 123  IDKAEDRNRFDQAMKSIGLECPRAGIAHNMEEALKVQAEVG-FPCIIRPSFTMGGTGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN EEFE IC  GL  S T+++L+++SL+GWKEYE+EV+RD  DN +I+C+IEN D MG
Sbjct: 182  AYNMEEFEEICTRGLDLSPTNELLIDESLIGWKEYEMEVVRDKKDNCIIVCAIENFDAMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGVE GGSNVQF ++P  G ++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQIMRNASLAVLREIGVETGGSNVQFGMDPKTGRLVVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITK-KTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL++GY+LD++ NDIT  +TPASFEP+IDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKIAAKLAIGYTLDELQNDITGGQTPASFEPAIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            F FEKFP +   LTTQMKSVGE MA+GR+FQES QKALR LE G  G+        +   
Sbjct: 362  FTFEKFPTANDRLTTQMKSVGEVMAIGRSFQESLQKALRGLETGSDGFNPQLDMAEENSK 421

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
            E+L + L+ P  DR+  I    + GM VDE++ ++ +D WFL Q ++LI  E  L  + +
Sbjct: 422  EKLSHELQSPGADRIWYIGDGFRSGMSVDELYAVTGVDPWFLVQIEDLIKEETALSDKGL 481

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
            ++MT D    +KR+GFSD ++A   + TEK +RE+R  L V P YKRVDTCAAEF  NT 
Sbjct: 482  ADMTFDVMRRLKRKGFSDARLADLLQVTEKSLRERRYLLDVHPVYKRVDTCAAEFATNTA 541

Query: 627  YMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSN 686
            YMYSSY+ ECE+APT K KV+ILGGGPNRIGQGIEFDYCC H +  L+  GYETIM+N N
Sbjct: 542  YMYSSYEDECEAAPTDKDKVIILGGGPNRIGQGIEFDYCCVHAALGLREDGYETIMVNCN 601

Query: 687  PETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHR 746
            PETVSTDYDTSDRLYFEP+T+EDVL ++  E+P+G+IVQFGGQTPLK    I + L    
Sbjct: 602  PETVSTDYDTSDRLYFEPVTLEDVLEIVRTEKPKGVIVQFGGQTPLK----IARALQNEG 657

Query: 747  LPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEIG 806
            +P         I GT+P++ID AEDRERF ++I+ L  +QP     +S   A+  A EIG
Sbjct: 658  VP---------IIGTTPEAIDRAEDRERFQSMIQRLGYKQPNNATVRSTEQAIVKAAEIG 708

Query: 807  YPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALAD 866
            YP+VVRPSYVLGGRAMEIVY ++ L  Y+  AV+V  + PVL+D +L+ AIEID+D ++D
Sbjct: 709  YPLVVRPSYVLGGRAMEIVYNEKELTRYMTTAVKVSNDSPVLLDHFLNAAIEIDIDCVSD 768

Query: 867  SCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNC 926
                VVIGGIM+HIEQAGVHSGDSAC +P  ++ ++  D I      +A  L V GLMN 
Sbjct: 769  G-EQVVIGGIMQHIEQAGVHSGDSACSLPPYSLPAATQDNIREMIKSMALELGVIGLMNT 827

Query: 927  QYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPKH 986
            Q A+   G++Y++E NPRASRTVPFVSK IG  LA+ AALVM+GKSL +LGFT+E+IP +
Sbjct: 828  QLAV-QDGEIYVIEVNPRASRTVPFVSKCIGRSLAQVAALVMAGKSLVELGFTEEIIPSY 886

Query: 987  VSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVFL 1046
             SVKEAV PF KFQG D +LGPEM+STGEVMG+  +F  AF KA +  G +LP SG  F+
Sbjct: 887  YSVKEAVFPFNKFQGVDPILGPEMKSTGEVMGVGDTFAEAFGKAVLGGGTELPTSGRAFI 946

Query: 1047 SLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVAN 1106
            S+ D+ K     +A+     GF +V T GTA +L   G+ V +V K++EGRPH  DM+ N
Sbjct: 947  SVRDMDKEGAVAVAQRLAQQGFDLVGTEGTAKYLTEHGVEVRKVNKVNEGRPHIVDMMKN 1006

Query: 1107 GQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAI 1154
            G+I  ++ T+SG +    D   +RR  L  KV   TT++GA A + AI
Sbjct: 1007 GEIDYIINTTSG-TQAITDSSLIRRTALQRKVCYTTTLAGAEATSLAI 1053



 Score =  237 bits (604), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 153/429 (35%), Positives = 231/429 (53%), Gaps = 25/429 (5%)

Query: 79  ASSKDQKLGKRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPAT 138
           +S +D+     TD  K++ILG GP  IGQ  EFDY    A   L+E+GYE I++N NP T
Sbjct: 545 SSYEDECEAAPTDKDKVIILGGGPNRIGQGIEFDYCCVHAALGLREDGYETIMVNCNPET 604

Query: 139 IMTDPGLADRTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGV 198
           + TD   +DR Y  P+T E V +++  E+P  ++   GGQT L +A       AL+  GV
Sbjct: 605 VSTDYDTSDRLYFEPVTLEDVLEIVRTEKPKGVIVQFGGQTPLKIA------RALQNEGV 658

Query: 199 ELIGAKLDAIKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAF 258
            +IG   +AI +AEDR+ F+  ++ +G K P +    + ++ I  A EIG +PL++RP++
Sbjct: 659 PIIGTTPEAIDRAEDRERFQSMIQRLGYKQPNNATVRSTEQAIVKAAEIG-YPLVVRPSY 717

Query: 259 TLGGTGGGIAYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIIC 318
            LGG    I YN++E        +  S  S VL++  L    E +++ + D  + VVI  
Sbjct: 718 VLGGRAMEIVYNEKELTRYMTTAVKVSNDSPVLLDHFLNAAIEIDIDCVSD-GEQVVIGG 776

Query: 319 SIENVDPMGVHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVD 378
            +++++  GVH+GDS    P  +L       +R+   ++  E+GV  G  N Q AV   D
Sbjct: 777 IMQHIEQAGVHSGDSACSLPPYSLPAATQDNIREMIKSMALELGV-IGLMNTQLAVQ--D 833

Query: 379 GEVMVIEMNPRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSI- 437
           GE+ VIE+NPR SR+    SK  G  +A++AA +  G SL ++           F   I 
Sbjct: 834 GEIYVIEVNPRASRTVPFVSKCIGRSLAQVAALVMAGKSLVEL----------GFTEEII 883

Query: 438 -DYVVTKIPRFAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALR--SLECGFSGW 494
             Y   K   F F KF G +P+L  +MKS GE M +G TF E+F KA+     E   SG 
Sbjct: 884 PSYYSVKEAVFPFNKFQGVDPILGPEMKSTGEVMGVGDTFAEAFGKAVLGGGTELPTSGR 943

Query: 495 GCSNVKELD 503
              +V+++D
Sbjct: 944 AFISVRDMD 952


>gi|452965305|gb|EME70330.1| carbamoyl phosphate synthase large subunit [Magnetospirillum sp.
            SO-1]
          Length = 1085

 Score = 1260 bits (3261), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 640/1104 (57%), Positives = 801/1104 (72%), Gaps = 45/1104 (4%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILI+GAGPIVIGQACEFDYSG QACKALK+EGY VIL+NSNPATIMTDPGLAD
Sbjct: 3    KRTDIKSILIIGAGPIVIGQACEFDYSGVQACKALKDEGYRVILVNSNPATIMTDPGLAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+TPE+V +++EKERPDALLPTMGGQTALN A+ LA+ G LEK+GVE+I AK D 
Sbjct: 63   ATYIEPITPEIVAKIIEKERPDALLPTMGGQTALNTAMKLADMGILEKFGVEMIAAKRDV 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR LF+ AM  IG+++P S +  TL E     + +G  P IIRP+FTL GTGGGI
Sbjct: 123  IAKAEDRLLFRDAMDKIGLESPKSRMVKTLQEARDALDFVG-LPAIIRPSFTLAGTGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN  E+E I   GLAAS   +VLVE+S+LGWKEYE+EV+RD  DN +IICSIENVDPMG
Sbjct: 182  AYNVAEYEHIVSGGLAASPVHEVLVEESVLGWKEYEMEVVRDKKDNCIIICSIENVDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPA TLTDKEYQ +R+ S+A++REIGV+ GGSNVQFAVNP DG + VIEMN
Sbjct: 242  VHTGDSITVAPALTLTDKEYQIMRNASLAVLREIGVDTGGSNVQFAVNPKDGRMTVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRF 447
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT  TPASFEP+IDYVVTKIPRF
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGYTLDELTNDITGCTPASFEPTIDYVVTKIPRF 361

Query: 448  AFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGW--------GCSNV 499
             FEKFPG++P LTT MKSVGEAMA+GRTFQES QK LRS+E G +G         G  ++
Sbjct: 362  TFEKFPGADPNLTTSMKSVGEAMAIGRTFQESLQKGLRSMETGLTGLDEVEIPGAGAGDM 421

Query: 500  KELDWDWEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQ 559
            K      + +K +L  P  DR+  I  A + G+ +DE+H   F DKWFL Q K ++D E 
Sbjct: 422  K------DAVKSALAQPRHDRLLVIAQAFRFGLSIDEVHAACFYDKWFLAQIKGIVDAEA 475

Query: 560  FLLTQSVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAA 619
             +  + +  +       +K+ GFSD++++  +  +  E   +R  L V P YKR+DTCAA
Sbjct: 476  EIKAKGLP-IDAPGLLRLKKMGFSDQRLSKLSGKSLVETTFRREVLNVKPVYKRIDTCAA 534

Query: 620  EFEANTPYMYSSYD------FECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSL 673
            EF ++T YMYS Y+       ECE+ P+ + KV+ILGGGPNRIGQGIEFDYCC H +++L
Sbjct: 535  EFPSSTAYMYSCYEGDGVNPAECEAQPSDRTKVIILGGGPNRIGQGIEFDYCCVHAAYAL 594

Query: 674  QSAGYETIMMNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPE----GIIVQFGGQ 729
              AG ETIM+N NPETVSTDYDTSDRLYFEPLT E V++++  E+      G IVQFGGQ
Sbjct: 595  DEAGKETIMVNCNPETVSTDYDTSDRLYFEPLTAETVIDLVRKEQSNGKVLGCIVQFGGQ 654

Query: 730  TPLKLSLPIHQYLDEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKG 789
            TPLKL+         H L  A     + I GTSPDSID AEDRERF  ++ +L ++QP  
Sbjct: 655  TPLKLA---------HALEKAG----IPILGTSPDSIDLAEDRERFQKLLHDLGLKQPAN 701

Query: 790  GIAKSEADALAIAKEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLI 849
            G A+S  +A+ +A++IGYPVV+RPS+VLGGRAM+IVY  E L  Y+  AV+V  + PVLI
Sbjct: 702  GTARSLDEAIKVAEKIGYPVVIRPSFVLGGRAMQIVYDHEALERYMVEAVKVSGDDPVLI 761

Query: 850  DKYLSDAIEIDVDALADSCGN-VVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTIS 908
            D YL DAIE+DVDAL D  GN V + GIM+HIE+AG+HSGDSAC +P  ++  + +  + 
Sbjct: 762  DYYLKDAIEVDVDALCD--GNQVYVAGIMQHIEEAGIHSGDSACSLPPYSLDKATIAELE 819

Query: 909  SWTIKLAKRLNVCGLMNCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVM 968
              T  LAK LNV GLMNCQYAI   GD+Y+LE NPRASRTVPFV+KA G P+AK AA VM
Sbjct: 820  RQTAALAKALNVVGLMNCQYAI-KDGDIYILEVNPRASRTVPFVAKATGVPIAKIAARVM 878

Query: 969  SGKSLNDLGFTKEVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFA 1028
            +G++L   G T     KHV+VKEAV PF +F G D+LLGPEM+STGEVMGID  F  AFA
Sbjct: 879  AGETLASFGLTTRPELKHVAVKEAVFPFARFPGVDILLGPEMKSTGEVMGIDSDFARAFA 938

Query: 1029 KAQIAAGQKLPLSGTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGI-AV 1087
            K+Q+ AG  LP  G  F+S+ D  KP +  IA+  L++GFK+++T GTA +L+ +G+  V
Sbjct: 939  KSQLGAGTHLPTEGGAFISVRDGDKPAMVEIARRLLEMGFKVMATDGTAFYLKDRGVTGV 998

Query: 1088 ERVLKMHEGRPHAGDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGA 1147
              V K+ EGRPH  D + NGQ+ ++V T+ G    + D   +RR  L   +P  TTV+GA
Sbjct: 999  TIVNKVLEGRPHCVDAMMNGQVHLVVNTTEGSQAVK-DSFSIRRTALTNNIPHYTTVAGA 1057

Query: 1148 LANAEAIRSLKSNTVTMTALQDFF 1171
             A  EAI +++  T+ +  LQ +F
Sbjct: 1058 RAAVEAIEAMRCGTLDVAPLQSYF 1081


>gi|319944202|ref|ZP_08018478.1| carbamoyl-phosphate synthase, large subunit [Lautropia mirabilis ATCC
            51599]
 gi|319742497|gb|EFV94908.1| carbamoyl-phosphate synthase, large subunit [Lautropia mirabilis ATCC
            51599]
          Length = 1088

 Score = 1260 bits (3261), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 619/1079 (57%), Positives = 800/1079 (74%), Gaps = 31/1079 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTDL  ILI+GAGPIVIGQACEFDYSG QACKAL++EGY V+L+NSNPATIMTDP +AD
Sbjct: 3    KRTDLESILIIGAGPIVIGQACEFDYSGAQACKALRQEGYRVVLVNSNPATIMTDPDMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+T +++E+++EKERP A+LPTMGGQTALN A+ L   G L+KYGVELIGA+ +A
Sbjct: 63   VTYIEPITWQVLERIIEKERPSAILPTMGGQTALNCALDLHRHGVLDKYGVELIGARPEA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I+KAEDR  FKQAM++IG+ +  S I +++DE      +IG FP+IIRP+FTLGGTGGGI
Sbjct: 123  IEKAEDRQKFKQAMESIGLGSARSAIAHSMDEAWEAQRDIG-FPVIIRPSFTLGGTGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN EEFE ICK GL  S T+++L+E+SL+GWKE+E+EV+RD  DN +I+CSIEN+DPMG
Sbjct: 182  AYNAEEFETICKTGLELSPTNELLIEESLIGWKEFEMEVVRDREDNCIIVCSIENLDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ +R+ SIA++REIGV+ GGSNVQFA++P  G ++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQLMRNASIAVLREIGVDTGGSNVQFAIHPETGRMIVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITK-KTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ N+IT   TPASFEP+IDYVV KIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGYTLDELKNEITGGATPASFEPAIDYVVVKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            FAFEKFP ++  LTTQMKSVGE MA+GRTFQ++ QKA+R LE G  G     + ++  D 
Sbjct: 362  FAFEKFPQADNRLTTQMKSVGEVMAIGRTFQQALQKAMRGLEVGVDG-----LNQMTTDR 416

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
            E ++  L  P  +R+  +  A  +G  ++E+H L+ ID WFL Q KE++D+E  L T ++
Sbjct: 417  EVIEKELGEPGSERIWYVGDAFAQGFTIEEVHALTKIDPWFLAQVKEIVDIELQLDTMTL 476

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
             ++  +    +K +G+SD+++ +  ++TE E+R+ R SLGV P YKRVDTCAAEF   T 
Sbjct: 477  GDLDAETLRTLKEKGYSDRRLGYLLETTEHEIRKLRHSLGVRPVYKRVDTCAAEFATQTA 536

Query: 627  YMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSN 686
            Y+YS+Y+ ECE+ P+ +KK+++LGGGPNRIGQGIEFDYCC H SF+L+  G+ETIM+N N
Sbjct: 537  YLYSTYEDECEAQPSDRKKIIVLGGGPNRIGQGIEFDYCCVHASFALREDGFETIMVNCN 596

Query: 687  PETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHR 746
            PETVSTDYDTSDRLYFEP+T+EDVL +++LE+P G+IVQ+GGQTPLKL+          R
Sbjct: 597  PETVSTDYDTSDRLYFEPVTLEDVLEIVELEKPVGVIVQYGGQTPLKLA----------R 646

Query: 747  LPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEIG 806
               A+G   V I GTSPDSID AEDRERF  ++  L + QP    A++E +A+ +A EIG
Sbjct: 647  ALEAAG---VPIIGTSPDSIDVAEDRERFQKLLTRLGLLQPPNRTARTEGEAIQLANEIG 703

Query: 807  YPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALAD 866
            YP+VVRPSYVLGGRAMEIV+    L  Y+  AV+V  + PVL+D++L+DAIE+DVD L D
Sbjct: 704  YPLVVRPSYVLGGRAMEIVHDQRDLERYMREAVKVSNDSPVLLDRFLNDAIEVDVDCLCD 763

Query: 867  SCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNC 926
                VVIGG+MEHIEQAGVHSGDSAC +P  ++S   ++ I   T+ +AK L V GLMN 
Sbjct: 764  G-ERVVIGGVMEHIEQAGVHSGDSACSLPPYSLSPVLVEEIKRQTVLMAKALKVRGLMNV 822

Query: 927  QYAITT----------SGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDL 976
            Q+AI            +  VY+LE NPRASRTVPFVSKA G  LAK AA  M GK+L + 
Sbjct: 823  QFAIQREPAEQEGQPPTERVYVLEVNPRASRTVPFVSKATGVQLAKVAARCMVGKTLAEQ 882

Query: 977  GFTKEVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQ 1036
            G T+EVIP +  +KEAV PF KF G D +LGPEM+STGEVMG+D SF  AF K+Q+  G 
Sbjct: 883  GVTEEVIPDYFCIKEAVFPFNKFPGVDTILGPEMKSTGEVMGVDYSFGSAFIKSQVGGGV 942

Query: 1037 KLPLSGTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEG 1096
            ++P  GT F+S+  + +P   R+AK   ++GF +V+T GTA  +   GI V  V K+ EG
Sbjct: 943  RMPTEGTAFISVKQIDRPRAIRVAKTLHEMGFSLVATKGTAGAIAEAGIPVTPVNKVQEG 1002

Query: 1097 RPHAGDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIR 1155
            RPH  DM+ NG+I +++ +         D   +R   LA +V   TT++ ALA  E + 
Sbjct: 1003 RPHVVDMLKNGEISLLINSVEERRSAIQDSRAIRTTALAQRVTFYTTIASALAAVEGMH 1061



 Score =  241 bits (614), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 159/463 (34%), Positives = 255/463 (55%), Gaps = 33/463 (7%)

Query: 36  YSNKKTGSLSLRSWPPQLTRYSRSR-VRASSAKIDS-SAELSNGAA----SSKDQKLGKR 89
           YS+++ G L L +   ++ +   S  VR    ++D+ +AE +   A    + +D+   + 
Sbjct: 492 YSDRRLGYL-LETTEHEIRKLRHSLGVRPVYKRVDTCAAEFATQTAYLYSTYEDECEAQP 550

Query: 90  TDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLADRT 149
           +D +KI++LG GP  IGQ  EFDY    A  AL+E+G+E I++N NP T+ TD   +DR 
Sbjct: 551 SDRKKIIVLGGGPNRIGQGIEFDYCCVHASFALREDGFETIMVNCNPETVSTDYDTSDRL 610

Query: 150 YITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDAIK 209
           Y  P+T E V +++E E+P  ++   GGQT L LA       ALE  GV +IG   D+I 
Sbjct: 611 YFEPVTLEDVLEIVELEKPVGVIVQYGGQTPLKLA------RALEAAGVPIIGTSPDSID 664

Query: 210 KAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGIAY 269
            AEDR+ F++ +  +G+  PP+    T  E I +ANEIG +PL++RP++ LGG    I +
Sbjct: 665 VAEDRERFQKLLTRLGLLQPPNRTARTEGEAIQLANEIG-YPLVVRPSYVLGGRAMEIVH 723

Query: 270 NKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMGVH 329
           ++ + E   +  +  S  S VL+++ L    E +++ + D  + VVI   +E+++  GVH
Sbjct: 724 DQRDLERYMREAVKVSNDSPVLLDRFLNDAIEVDVDCLCD-GERVVIGGVMEHIEQAGVH 782

Query: 330 TGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAV---------NPVDGE 380
           +GDS    P  +L+    + ++  ++ + + + V  G  NVQFA+          P    
Sbjct: 783 SGDSACSLPPYSLSPVLVEEIKRQTVLMAKALKVR-GLMNVQFAIQREPAEQEGQPPTER 841

Query: 381 VMVIEMNPRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYV 440
           V V+E+NPR SR+    SKATG  +AK+AA+  VG +L +    +T+      E   DY 
Sbjct: 842 VYVLEVNPRASRTVPFVSKATGVQLAKVAARCMVGKTLAE--QGVTE------EVIPDYF 893

Query: 441 VTKIPRFAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKA 483
             K   F F KFPG + +L  +MKS GE M +  +F  +F K+
Sbjct: 894 CIKEAVFPFNKFPGVDTILGPEMKSTGEVMGVDYSFGSAFIKS 936


>gi|21108068|gb|AAM36724.1| carbamoyl-phosphate synthase large chain [Xanthomonas axonopodis pv.
            citri str. 306]
          Length = 1090

 Score = 1260 bits (3261), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 627/1073 (58%), Positives = 802/1073 (74%), Gaps = 21/1073 (1%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTDL  ILI+GAGPIVIGQACEFDYSG QACKAL++EGY V+L+NSNPATIMTDP +AD
Sbjct: 13   KRTDLETILIIGAGPIVIGQACEFDYSGAQACKALRDEGYRVVLVNSNPATIMTDPNMAD 72

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
              YI P+  + VE+++ KE+PDALLPTMGGQTALN A+ LA+ G LEKY VELIGAK +A
Sbjct: 73   AVYIEPINWQTVEKIIAKEKPDALLPTMGGQTALNCALDLADHGVLEKYNVELIGAKREA 132

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I+ AEDR+LF+ AM  IG+  P + + +TL+E + I   +G +P IIRP+FTLGG+GGGI
Sbjct: 133  IRMAEDRELFRVAMGEIGLDCPTAAVAHTLEEALEIQTRVG-YPTIIRPSFTLGGSGGGI 191

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EE   I   GL  S T++VLVE+S+LGWKE+E+EV+RD ADN +I+C+IEN+DPMG
Sbjct: 192  AYNREELIEIVGRGLELSPTTEVLVEESVLGWKEFEMEVVRDTADNCIIVCAIENLDPMG 251

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQRLRD SIA++R+IGV+ GGSNVQF ++P  G V+VIEMN
Sbjct: 252  VHTGDSITVAPAQTLTDKEYQRLRDASIAVLRKIGVDTGGSNVQFGISPTTGRVVVIEMN 311

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKK-TPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ N+IT   TPASFEPSIDYVVTKIPR
Sbjct: 312  PRVSRSSALASKATGFPIAKVAAKLAVGYTLDELKNEITGGLTPASFEPSIDYVVTKIPR 371

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVK-ELDWD 505
            FAFEKFP ++  LTTQMKSVGE MA+GRTF ES QKALR LE G  G   + +    + D
Sbjct: 372  FAFEKFPQADARLTTQMKSVGEVMAMGRTFSESLQKALRGLETGKIGLDPTGLDLSSEDD 431

Query: 506  WEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQS 565
               LK  L+ P P+R+  +  A + GM V +++ LSFID WFL Q +E++  EQ L    
Sbjct: 432  IATLKRELKAPGPERLFYVADAFRAGMTVADVYALSFIDPWFLDQIEEIVSHEQQLADDG 491

Query: 566  VSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANT 625
            ++ +       +KR GFSD ++A    S E+ VR  R +L V P YKRVD+CAAEF  +T
Sbjct: 492  MAALDAPRLRMLKRAGFSDARMAQLIGSNEESVRTLRRALKVRPVYKRVDSCAAEFATST 551

Query: 626  PYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNS 685
             Y+YS+Y+ ECE+ PT + K++ILGGGPNRIGQGIEFDYCC H + +L+  G+ETIM+N 
Sbjct: 552  AYLYSTYEDECEALPTDRDKIMILGGGPNRIGQGIEFDYCCVHAALALRDDGFETIMVNC 611

Query: 686  NPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEH 745
            NPETVSTDYDTSDRLYFEPLT+EDVL +++LE+P+G+IVQ+GGQTPLKL+          
Sbjct: 612  NPETVSTDYDTSDRLYFEPLTLEDVLEIVELEKPKGVIVQYGGQTPLKLA---------- 661

Query: 746  RLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEI 805
            R   A+G   V + GTSPDSID AEDRERF  ++ +L ++QP   IA++  +AL +A+EI
Sbjct: 662  RALEANG---VPVIGTSPDSIDLAEDRERFQQLVDKLGLKQPPNRIARNAEEALVLAREI 718

Query: 806  GYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALA 865
            GYP+VVRPSYVLGGRAMEIVY +  L  Y+ +AV+V  + PVL+D++L +A+E+DVD +A
Sbjct: 719  GYPLVVRPSYVLGGRAMEIVYGESDLARYVRDAVKVSNDSPVLLDRFLDNAVEVDVDIIA 778

Query: 866  DSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMN 925
            D  GNV+IGG+MEHIE+AGVHSGDS+C +P  ++S      +    + LA+ LNV GLMN
Sbjct: 779  DKDGNVLIGGVMEHIEEAGVHSGDSSCSLPPYSLSPQTQAELRRQVVMLAEGLNVVGLMN 838

Query: 926  CQYAITT--SGD--VYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKE 981
             Q+A+    +GD  VYLLE NPRASRTVPFVSKAIG PLAK AA  M+GK+L + G TKE
Sbjct: 839  TQFAVQVNEAGDDIVYLLEVNPRASRTVPFVSKAIGMPLAKIAARCMAGKTLAEQGATKE 898

Query: 982  VIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLS 1041
            ++P + SVKEA+ PF KFQG D +LGPEMRSTGEVMG+  SF  AFA+AQ A G K P  
Sbjct: 899  IVPDYYSVKEAIFPFAKFQGVDPILGPEMRSTGEVMGVGRSFSAAFARAQEAGGIKAPPL 958

Query: 1042 GTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAG 1101
            G  F+S+ D  K  +  +A+A ++ GF +V+T GT  +L+  G++ E V K+ EGRPH  
Sbjct: 959  GKAFVSVRDPDKQRVLPVAQALVERGFTLVATRGTGAWLQQNGLSCEIVNKVAEGRPHIV 1018

Query: 1102 DMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAI 1154
            D + NG+I  +V T+ G +    D   +RR  L ++V   TTV+GA A  +++
Sbjct: 1019 DSIKNGEIVYIVNTTEGRAAIS-DSFSIRREALQHRVTYSTTVAGAKALVQSL 1070


>gi|237748686|ref|ZP_04579166.1| carbamoyl phosphate synthase [Oxalobacter formigenes OXCC13]
 gi|229380048|gb|EEO30139.1| carbamoyl phosphate synthase [Oxalobacter formigenes OXCC13]
          Length = 1076

 Score = 1260 bits (3261), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 641/1090 (58%), Positives = 819/1090 (75%), Gaps = 29/1090 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILI+GAGPI+IGQACEFDYSG QACKAL+EEGY+VIL+NSNPATIMTDP  AD
Sbjct: 3    KRTDIKSILIIGAGPIIIGQACEFDYSGAQACKALREEGYKVILVNSNPATIMTDPETAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             T+I P+T ++VE+++E+ERPDA+LPTMGGQTALN A+ L  +G LEKY VELIGA  +A
Sbjct: 63   VTFIEPITWKVVERIIEQERPDAILPTMGGQTALNCALDLYRNGVLEKYNVELIGASPEA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  FK+AM  IG+ +  SGI +TL+E   +  ++G FP+IIRP+FTLGGTGGGI
Sbjct: 123  IDKAEDRAKFKEAMTKIGLSSARSGIAHTLEEAWDVQKQLG-FPVIIRPSFTLGGTGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEFE IC+ GL AS T+++L+E+SL+GWKE+E+EV+RD  DN +I+CSIEN+DPMG
Sbjct: 182  AYNEEEFETICRRGLEASPTNELLIEESLIGWKEFEMEVVRDRVDNCIIVCSIENLDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAP+QTLTDKEYQ +R+ SIAI+REIGV+ GGSNVQFA+NP DG ++VIEMN
Sbjct: 242  VHTGDSITVAPSQTLTDKEYQIMRNASIAILREIGVDTGGSNVQFAINPKDGRMIVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITK-KTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VG++LD++ NDIT   TPASFEP+IDYVVTK+PR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGFTLDELRNDITGGATPASFEPTIDYVVTKVPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            F FEKFP ++  LTTQMKSVGE MA+GRTFQESFQKALR LE G  G     + E   D 
Sbjct: 362  FTFEKFPSADSHLTTQMKSVGEVMAIGRTFQESFQKALRGLEVGVEG-----MNEKTRDH 416

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
            E +K  L  P P+R+  +  A  +G  ++E+  L+ ID WFL+Q KE++D+E +L  Q V
Sbjct: 417  EVIKEELGEPGPERIWYVGDAFAQGFTLEEVQALTHIDPWFLSQIKEIVDIELWLDQQKV 476

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
             ++ KD  +++K++GFSDK++ +  K+T+K +R+KR   G+ P YKRVDTCAAEF  NT 
Sbjct: 477  EDLDKDTLFKLKQKGFSDKRLGWLLKTTDKVIRDKRHEFGIRPVYKRVDTCAAEFATNTA 536

Query: 627  YMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSN 686
            YMYS+YD ECE+ PT +KK+++LGGGPNRIGQGIEFDYCC H + +++  GYETIM+N N
Sbjct: 537  YMYSTYDEECEAEPTNRKKIMVLGGGPNRIGQGIEFDYCCVHAAMAMREDGYETIMVNCN 596

Query: 687  PETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHR 746
            PETVSTDYD SDRLYFEPLT+EDVL ++D E+P G+IVQ+GGQTPLKL+L +        
Sbjct: 597  PETVSTDYDISDRLYFEPLTLEDVLEIVDKEKPYGVIVQYGGQTPLKLALDLE------- 649

Query: 747  LPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEIG 806
               A+G   V I GTSPD IDAAEDRERF  ++K+L + QP    A++E +AL +A+EIG
Sbjct: 650  ---ANG---VPIVGTSPDMIDAAEDRERFQKLLKDLDLRQPPNRTARTEEEALKLAEEIG 703

Query: 807  YPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALAD 866
            YP+VVRPSYVLGGRAMEIV+   +L  Y+  AV+V  + PVL+D++L+DAIE+DVD L+D
Sbjct: 704  YPIVVRPSYVLGGRAMEIVHDQASLERYMREAVKVSNDSPVLLDRFLNDAIEVDVDCLSD 763

Query: 867  SCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNC 926
                  IGG+MEHIEQAGVHSGDSAC +P  ++S + ++ +   T  +AK LNV GLMN 
Sbjct: 764  G-ERTFIGGVMEHIEQAGVHSGDSACSLPPYSLSKATIEELKRQTTLMAKGLNVVGLMNV 822

Query: 927  QYAIT---TSGD----VYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFT 979
            Q+AI     +G     VY+LE NPRASRTVPFVSKA G  LAK AA  M G+SL   G  
Sbjct: 823  QFAIQHQEVNGKLQDVVYVLEVNPRASRTVPFVSKATGKQLAKIAARCMVGQSLEQQGIE 882

Query: 980  KEVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLP 1039
            KEVIP + SVKEAV PF KF G D +LGPEM+STGEVMG+  SF  AF K+Q+AAG  LP
Sbjct: 883  KEVIPPYFSVKEAVFPFVKFPGVDTILGPEMKSTGEVMGVGKSFGEAFVKSQMAAGVNLP 942

Query: 1040 LSGTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPH 1099
             +G VFLS+ D  KP   ++A+A + +GF I++T GTA  +   GI  E V K+ EGRPH
Sbjct: 943  RTGKVFLSVKDSDKPRAVKVARALVQMGFTIMATKGTAKVMREAGIDAETVNKVAEGRPH 1002

Query: 1100 AGDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKS 1159
             GD++ N +I M++ T         D   +R   LA ++  ITT++GA A  + I  +  
Sbjct: 1003 IGDVIKNHEIVMVINTVEEKRNAIFDSRTIRTSALAARINTITTIAGAEAAVQGIACMDQ 1062

Query: 1160 -NTVTMTALQ 1168
             N  ++ +L 
Sbjct: 1063 INVYSLQSLH 1072


>gi|452128219|ref|ZP_21940798.1| carbamoyl phosphate synthase large subunit [Bordetella holmesii H558]
 gi|451926434|gb|EMD76570.1| carbamoyl phosphate synthase large subunit [Bordetella holmesii H558]
          Length = 1079

 Score = 1260 bits (3261), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 646/1078 (59%), Positives = 811/1078 (75%), Gaps = 27/1078 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTDL+ ILI+GAGPI+IGQACEFDYSG QACKALK EGY  IL+NSNPATIMTDP  AD
Sbjct: 3    KRTDLKSILIIGAGPIIIGQACEFDYSGAQACKALKAEGYRTILVNSNPATIMTDPETAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+T + VE+++E+ERPDALLPTMGGQTALN A+ LA +G L KYGVELIGA   A
Sbjct: 63   VTYIEPITWQAVEKIIERERPDALLPTMGGQTALNCALDLAHNGVLTKYGVELIGANEHA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECIS----IANEIGE--FPLIIRPAFTLG 261
            I+KAEDR  FKQAM  I + +  SG+ +TLDE       IA EIG   FP++IRP+FTLG
Sbjct: 123  IEKAEDRQKFKQAMTDIDLASAKSGVAHTLDEAWEVQRRIAAEIGTAGFPVVIRPSFTLG 182

Query: 262  GTGGGIAYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIE 321
            GTGGGIAYN EEFE IC+ GL AS T+++L+E+SLLGWKE+E+EV+RD ADN +I+CSIE
Sbjct: 183  GTGGGIAYNAEEFETICRRGLEASPTNELLIEESLLGWKEFEMEVVRDKADNCIIVCSIE 242

Query: 322  NVDPMGVHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEV 381
            N+DPMGVHTGDSITVAPAQTLTDKEYQ +RD SIA++REIGV+ GGSNVQFAVNP +G +
Sbjct: 243  NLDPMGVHTGDSITVAPAQTLTDKEYQIMRDASIAVLREIGVDTGGSNVQFAVNPKNGRM 302

Query: 382  MVIEMNPRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITK-KTPASFEPSIDYV 440
            +VIEMNPRVSRSSALASKATGFPIAK+AA+L++GY+LD++ N+IT   TPASFEPSIDYV
Sbjct: 303  IVIEMNPRVSRSSALASKATGFPIAKVAARLAIGYTLDELQNEITGGATPASFEPSIDYV 362

Query: 441  VTKIPRFAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVK 500
            VTK+PRFAFEKFP ++  LTTQMKSVGE MA+GRTFQESFQKALR LE G  G     + 
Sbjct: 363  VTKVPRFAFEKFPQADARLTTQMKSVGEVMAMGRTFQESFQKALRGLEVGVDG-----LN 417

Query: 501  ELDWDWEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQF 560
            +   D E+L+  L  P P+R+  +  A  +G  +DE+H ++ ID WFL Q KE++D+E  
Sbjct: 418  QKTTDREKLQVELGEPGPERIWYVGDAFAQGFTLDEVHNITHIDPWFLAQIKEIVDIELA 477

Query: 561  LLTQSVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAE 620
            L  +++S++     +E+KRRGFSD+++AF   S+E EVR+ R  L V P YKRVDTCAAE
Sbjct: 478  LEQKTLSDLDYATLFELKRRGFSDRRLAFLLDSSESEVRKLRHQLNVRPVYKRVDTCAAE 537

Query: 621  FEANTPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYET 680
            F   T YMYS+Y+ ECE+ PT +KK+++LGGGPNRIGQGIEFDYCC H S +L+  G+ET
Sbjct: 538  FATRTAYMYSTYEEECEAQPTDRKKIIVLGGGPNRIGQGIEFDYCCVHASLALREDGFET 597

Query: 681  IMMNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQ 740
            IM+N NPETVSTDYDTSDRLYFEPLT+EDVL ++  E P G+IVQ+GGQTPLKL+     
Sbjct: 598  IMVNCNPETVSTDYDTSDRLYFEPLTLEDVLEIVHKENPVGMIVQYGGQTPLKLA----- 652

Query: 741  YLDEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALA 800
                 R   A+G   V I GTSP+SID AEDRERF  ++ +L + QP    A++EA+ALA
Sbjct: 653  -----RALEANG---VPIIGTSPESIDVAEDRERFQKLLNKLGLRQPPNRTARTEAEALA 704

Query: 801  IAKEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEID 860
             A EIGYP+VVRPSYVLGGRAMEIV+  + L  Y+  AV+V  + PVL+D +L++A E+D
Sbjct: 705  HAAEIGYPLVVRPSYVLGGRAMEIVHEQQDLERYMRAAVKVSNDSPVLLDHFLNNATEVD 764

Query: 861  VDALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNV 920
            VD LAD    V IGG+MEHIEQAGVHSGDSAC +P  ++S+  +  I   T  +A+ LNV
Sbjct: 765  VDCLADG-ETVFIGGVMEHIEQAGVHSGDSACSLPPYSLSADIVAEIKRQTTTMARALNV 823

Query: 921  CGLMNCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTK 980
             GLMN Q+A+   GDVY+LE NPRASRTVP+VSKA G  LAK AA  M+G++L   G T+
Sbjct: 824  SGLMNVQFAV-QDGDVYVLEVNPRASRTVPYVSKATGLQLAKIAARAMAGRTLAQQGVTE 882

Query: 981  EVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPL 1040
            EV+P +  VKEAV PF KF G D +LGPEM+STGEVMG+  SF  AF K+Q+AAG +LP 
Sbjct: 883  EVVPAYFCVKEAVFPFVKFPGVDTILGPEMKSTGEVMGVGRSFGEAFVKSQLAAGVRLPE 942

Query: 1041 SGTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHA 1100
            SGTVF+S+ +  KP    +A+   ++GFK+V+T GTA  +E  GI V+ V K+ EGRPH 
Sbjct: 943  SGTVFISVKNQDKPRAVEVARGLHNLGFKLVATRGTAAEIEAAGIPVQVVNKVTEGRPHI 1002

Query: 1101 GDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLK 1158
             DMV NG++ +++ T         D   +R + LA ++   TT++GA A  E ++ L+
Sbjct: 1003 VDMVKNGEVSLVINTVEERRNAIADSRTIRTQALANRITFYTTIAGARAAVEGMQFLR 1060


>gi|430375708|ref|ZP_19430111.1| carbamoyl-phosphate synthase large subunit [Moraxella macacae
            0408225]
 gi|429540939|gb|ELA08967.1| carbamoyl-phosphate synthase large subunit [Moraxella macacae
            0408225]
          Length = 1075

 Score = 1260 bits (3260), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 629/1072 (58%), Positives = 799/1072 (74%), Gaps = 28/1072 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KR+D++ ILI+GAGPIVIGQACEFDYSG QACKALKEEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRSDIKSILIIGAGPIVIGQACEFDYSGAQACKALKEEGYRVILVNSNPATIMTDPAMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+T + VEQ++ KERPDA+LPTMGGQTALN A+ L + G L KY  ELIGA  DA
Sbjct: 63   ATYIEPITWQTVEQIIAKERPDAILPTMGGQTALNCALDLDKHGVLAKYDCELIGASKDA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I+KAEDR+LF  AMK IG++ P + + +T+DE ++I    G FP+IIRP+FT+GG+GGGI
Sbjct: 123  IEKAEDRELFDAAMKKIGLECPKADVASTMDEALAIQARFG-FPVIIRPSFTMGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYNK+EF  IC+ G   S T Q+L+++SL+GWKEYE+EV+RD  DN +IICSIEN DPMG
Sbjct: 182  AYNKDEFMEICERGFDLSPTHQLLIDESLIGWKEYEMEVVRDKNDNCIIICSIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ +R+ SIA++REIGVE GGSNVQF +NP DG ++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQLMRNASIAVLREIGVETGGSNVQFGINPKDGRMVVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITK-KTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VG++LD++ NDIT  KTPASFEP++DYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKIAAKLAVGFTLDELKNDITGGKTPASFEPALDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWD- 505
            F FEKFP ++P+LTTQMKSVGE MA+GR FQES QKALR LE G +G+     +    D 
Sbjct: 362  FNFEKFPKADPVLTTQMKSVGEVMAIGRNFQESLQKALRGLETGATGFDEIFTERTPNDK 421

Query: 506  -WEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQ 564
               ++K  L  P P+R+  I  A++ GM V+EI  L+ ID WFL Q K++ID E ++ T 
Sbjct: 422  ILSEIKARLTTPTPERIFYIAEALRFGMTVEEIFALTHIDLWFLVQIKDIIDSENWVKTL 481

Query: 565  SVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEAN 624
             +S++T + F ++KR+G +D ++A     +EK++R+KR SLGV P YKRVDTCA EF ++
Sbjct: 482  GLSDLTAEMFTQLKRKGLADLRLANLMGISEKQLRKKRWSLGVYPVYKRVDTCAGEFASD 541

Query: 625  TPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMN 684
            T YMYS+YD ECES P+++ K++++GGGPNRIGQGIEFDYCC H + +++  G+ETIM+N
Sbjct: 542  TAYMYSTYDEECESNPSERDKIMVIGGGPNRIGQGIEFDYCCVHAALAMRDDGFETIMVN 601

Query: 685  SNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDE 744
             NPETVSTDYDTSDRLYFE +T+EDVL ++ +E+P+G+IVQ+GGQTPLKL+  +      
Sbjct: 602  CNPETVSTDYDTSDRLYFESVTLEDVLEIVRIEQPKGVIVQYGGQTPLKLARSLE----- 656

Query: 745  HRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKE 804
                    D  V I GTSPD+ID AEDRERF A+I +L + QP   + KS ++  A A +
Sbjct: 657  --------DAGVPIIGTSPDAIDRAEDRERFAAMIAKLGLRQPSNALIKSASEGAAAAAK 708

Query: 805  IGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDAL 864
            +GYP+VVRPSYVLGGRAMEIVY ++ L  YL  AV+   + PVL+D +L DA E+DVD +
Sbjct: 709  VGYPLVVRPSYVLGGRAMEIVYNEDELNRYLREAVQASDKSPVLLDHFLDDATEVDVDCV 768

Query: 865  ADSCGN-VVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGL 923
            +D  GN VVIGGIM+HIEQAGVHSGDSAC IP  ++SS   D +   TI +AK L V GL
Sbjct: 769  SD--GNTVVIGGIMQHIEQAGVHSGDSACSIPPYSLSSKVQDEMRRQTIAMAKELGVVGL 826

Query: 924  MNCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVI 983
            MN Q+A+     +Y+LE NPRASRTVPFVSK IG  LAK AA  M+GKSL + GFT+E+I
Sbjct: 827  MNVQFAVKDDV-IYVLEVNPRASRTVPFVSKCIGVSLAKVAARAMAGKSLTEQGFTEEII 885

Query: 984  PKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQK---LPL 1040
            PKH SVKEAV PF KF   D +LGPEM+STGEVMG+  +F  A+ KA IA+G +   LP 
Sbjct: 886  PKHFSVKEAVFPFAKFPKVDPVLGPEMKSTGEVMGVGETFAEAYYKAIIASGDRLTGLPT 945

Query: 1041 SG---TVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGR 1097
             G   TVF+S+ D  K  +  +AK     GF IV+TSGT   L   GI  ++V K+ EGR
Sbjct: 946  DGELKTVFISVRDSDKAGVVEVAKQMAQYGFNIVATSGTHKVLSENGIVCQKVNKVTEGR 1005

Query: 1098 PHAGDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALA 1149
            PH  DM+ NG++ +++ T+ G    Q D   +RR  L  KV   +T++   A
Sbjct: 1006 PHVVDMIKNGEVHLIINTTEGKQA-QEDSFAIRRNALQQKVFTASTLNSGKA 1056


>gi|402758206|ref|ZP_10860462.1| carbamoyl-phosphate synthase large subunit [Acinetobacter sp. NCTC
            7422]
          Length = 1077

 Score = 1260 bits (3260), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 625/1080 (57%), Positives = 796/1080 (73%), Gaps = 36/1080 (3%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILI+GAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIKSILIIGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPAMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+T + V Q++EKERPDA+LPTMGGQTALN A+AL E G LEKY VELIGA  +A
Sbjct: 63   ATYIEPITWQTVAQIIEKERPDAVLPTMGGQTALNCALALDEHGVLEKYNVELIGASKEA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I+KAEDR LF  AM+ IG++ P + I  T++E ++I    G FP+IIRP+FT+GG+GGGI
Sbjct: 123  IEKAEDRKLFDIAMRKIGLECPKAAIAETMEEALAIQAGFG-FPVIIRPSFTMGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEF  IC+ G   S T Q+L+++SL+GWKEYE+EV+RD  DN +I+C+IEN DPMG
Sbjct: 182  AYNREEFLEICERGFDLSPTHQLLIDESLIGWKEYEMEVVRDKNDNCIIVCAIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGVE GGSNVQF +NP DG ++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQLMRNASVAVLREIGVETGGSNVQFGINPKDGRMVVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKK-TPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT   TPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKIAAKLAVGYTLDELKNDITGGVTPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGW------GCSNVK 500
            F FEKFP +EP+LTTQMKSVGE MA+GR FQES QKALR LE G  G+      G +N K
Sbjct: 362  FNFEKFPQAEPVLTTQMKSVGEVMAIGRNFQESVQKALRGLEVGVCGFDEKVEAGTANAK 421

Query: 501  ELDWDWEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQF 560
            ++      +   L+VP P+R+  +  A + G  +D++ E + ID+WFL Q +++I  E  
Sbjct: 422  DI------ILKELKVPGPERIWYVADAFRHGFSLDDVFEATKIDRWFLIQIEDIIKTEAQ 475

Query: 561  LLTQSVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAE 620
            + T    ++  D+    KR+G SD +IA     ++K+ R+ R +LGV P YKRVDTCAAE
Sbjct: 476  VKTLGFGDLNADNIRSFKRKGLSDLRIANLMGISQKQFRKHRWNLGVYPVYKRVDTCAAE 535

Query: 621  FEANTPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYET 680
            FE+ T YMYS+YD ECE+ P+ + K++++GGGPNRIGQGIEFDYCC H + +++  GYET
Sbjct: 536  FESGTAYMYSTYDEECEANPSNRDKIMVIGGGPNRIGQGIEFDYCCVHAALAMRDDGYET 595

Query: 681  IMMNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQ 740
            IM+N NPETVSTDYDTSDRLYFEP+T+EDVL ++  E+P+G+IVQ+GGQTPLKL+    +
Sbjct: 596  IMVNCNPETVSTDYDTSDRLYFEPVTLEDVLEIVRTEKPKGVIVQYGGQTPLKLA----R 651

Query: 741  YLDEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALA 800
             L+E   P         I GTSPD+ID AEDRERF  +I+ L + QP   I KS  + ++
Sbjct: 652  ALEEAGTP---------IIGTSPDAIDRAEDRERFQQMIQRLQLRQPNNSIVKSAEEGIS 702

Query: 801  IAKEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEID 860
             A ++GYP+VVRPSYVLGGRAMEIVY ++ L  YL  AV+   E PVL+D++L DA E+D
Sbjct: 703  EAAKVGYPLVVRPSYVLGGRAMEIVYNEDELKRYLREAVQASNEAPVLLDRFLDDATEVD 762

Query: 861  VDALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNV 920
            VD ++D   +VVIGGIM+HIEQAG+HSGDSAC IP  ++S    D +   T+ +AK L V
Sbjct: 763  VDCVSDG-KDVVIGGIMQHIEQAGIHSGDSACSIPPYSLSQEVQDEMRRQTVAMAKELGV 821

Query: 921  CGLMNCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTK 980
             GLMN Q+A+    D+Y+LE NPRASRTVPFVSK IG  LAK AA  M+G+SL   GFTK
Sbjct: 822  IGLMNVQFAV-KGDDIYVLEVNPRASRTVPFVSKCIGDSLAKVAARCMAGQSLASQGFTK 880

Query: 981  EVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQK--- 1037
            E+IP H +VKEAV PF KF G D +LGPEM+STGEVMG+  +F  AF KA + + ++   
Sbjct: 881  EIIPTHYAVKEAVFPFAKFPGVDPMLGPEMKSTGEVMGVGKTFGEAFYKAVLGSNERLPG 940

Query: 1038 LPLSGTV---FLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMH 1094
            LP  G V   FLS+ +  K ++  +AK  +  GFK+V+T+GT   L+  GI  E V K+ 
Sbjct: 941  LPTEGEVKHAFLSVRESDKKYIADVAKKLIAYGFKLVATNGTHRVLKEAGIECEAVNKVT 1000

Query: 1095 EGRPHAGDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAI 1154
            EGRPH  D + NG+I ++V T+ G    Q D   +RR  L  KV   TT++GA A  +A 
Sbjct: 1001 EGRPHIVDRLKNGEIHLIVNTTEGKQA-QYDSAMIRRAALQGKVYYTTTINGAEAVCQAF 1059


>gi|418292337|ref|ZP_12904280.1| carbamoyl phosphate synthase large subunit [Pseudomonas stutzeri ATCC
            14405 = CCUG 16156]
 gi|379063763|gb|EHY76506.1| carbamoyl phosphate synthase large subunit [Pseudomonas stutzeri ATCC
            14405 = CCUG 16156]
          Length = 1073

 Score = 1260 bits (3260), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 630/1085 (58%), Positives = 803/1085 (74%), Gaps = 22/1085 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILILGAGPIVIGQACEFDYSG QACKALKEEG+ VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIKSILILGAGPIVIGQACEFDYSGAQACKALKEEGFRVILVNSNPATIMTDPSMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+    V +++EKERPDALLPTMGGQTALN A+ L + G LEK+GVE+IGA  D 
Sbjct: 63   ATYIEPIKWATVAKIIEKERPDALLPTMGGQTALNCALDLEKHGVLEKFGVEMIGANADT 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  F +AMK IG+  P SGI + +DE   +  ++G FP IIRP+FT+GGTGGGI
Sbjct: 123  IDKAEDRSRFDKAMKNIGLACPVSGIAHNMDEAYGVLEKVG-FPCIIRPSFTMGGTGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEFE IC  GL  S TS++L+++SL+GWKEYE+EV+RD  DN +I+C+IEN DPMG
Sbjct: 182  AYNREEFEEICARGLDLSPTSELLIDESLIGWKEYEMEVVRDKKDNCIIVCAIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ LR+ S+A++REIGVE GGSNVQF + P  G ++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQILRNASLAVLREIGVETGGSNVQFGICPNTGRMVVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT  +TPASFEP+IDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKIAAKLAVGYTLDELSNDITGGRTPASFEPAIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            FAFEKFP ++  LTTQMKSVGE MA+GRTFQES QKALR LE G +G+    +   D + 
Sbjct: 362  FAFEKFPKADARLTTQMKSVGEVMAIGRTFQESLQKALRGLEVGVAGFD-EKLDLADPEA 420

Query: 507  EQ-LKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQS 565
            E  L+  L VP+ DR+  I  A + G  V ++  L+ ID+WFL Q ++LI  E+ + T +
Sbjct: 421  ESTLRRELTVPSADRIWYIADAFRAGKTVADVFALTNIDEWFLVQIEDLIKDEERIKTLA 480

Query: 566  VSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANT 625
            +S++ +D  Y +KR+GFSD ++A     TEK +R  R  L V+P YKRVDTCAAEF  +T
Sbjct: 481  LSSIDRDSMYTLKRKGFSDIRLAKLLGVTEKNLRSHRHKLKVLPVYKRVDTCAAEFATDT 540

Query: 626  PYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNS 685
             YMYS+Y+ ECE+ P+ + KV+ILGGGPNRIGQGIEFDYCC H + +L+  GYETIM+N 
Sbjct: 541  AYMYSTYEEECEANPSSRDKVMILGGGPNRIGQGIEFDYCCVHAALALREDGYETIMVNC 600

Query: 686  NPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEH 745
            NPETVSTDYDTSDRLYFEP+T+EDVL ++ +E+P+G+IVQ+GGQTPLK    I + L+E 
Sbjct: 601  NPETVSTDYDTSDRLYFEPVTLEDVLEIVRVEQPKGVIVQYGGQTPLK----ICRALEEA 656

Query: 746  RLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEI 805
             +P         I GTSPD+ID AEDRERF  +++ L + QP    A+SE +ALA +K I
Sbjct: 657  GVP---------IIGTSPDAIDRAEDRERFQQMVQRLGLRQPANATARSEEEALAHSKTI 707

Query: 806  GYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALA 865
            GYP+VVRPSYVLGGRAMEIVY ++ L  Y+  AV+V  + PVL+D +L+ AIE+DVDA+ 
Sbjct: 708  GYPLVVRPSYVLGGRAMEIVYQEDELKRYMREAVKVSNDSPVLLDHFLNCAIEVDVDAVC 767

Query: 866  DSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMN 925
            D    VVIG IM+HIEQAGVHSGDSAC +P  ++     D I     K+A  LNV GLMN
Sbjct: 768  DG-ETVVIGAIMQHIEQAGVHSGDSACSLPPYSLPMHIQDEIRDQVKKMALELNVVGLMN 826

Query: 926  CQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPK 985
             Q A+    D++++E NPRASRTVPFVSK +G  LAK AA VM+GK+L + G++ E+IP 
Sbjct: 827  VQMAVQGE-DIFVIEVNPRASRTVPFVSKCVGVSLAKVAARVMAGKTLEEAGYSAEIIPP 885

Query: 986  HVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVF 1045
            + SVKEAV PF KF G D +LGPEM+STGEVMG+  +F  AFAKAQ  A + LP +G  F
Sbjct: 886  YFSVKEAVFPFAKFPGVDPILGPEMKSTGEVMGVGDTFGEAFAKAQSGASEILPNAGVAF 945

Query: 1046 LSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVA 1105
            +S+ D  KP +  +A+  +++GF++V+T+GTA  +E  G+ V RV K+ EGRPH  DM+ 
Sbjct: 946  ISVRDDDKPLVAGVARDLIELGFEVVATAGTAKLIEAAGLPVRRVNKVTEGRPHVVDMIK 1005

Query: 1106 NGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTVTMT 1165
            N ++ +++ T+ G      D   +RR  L +K+   TT++   A  EA++     TV   
Sbjct: 1006 NDEVTLIINTTEGRQ-SIADSYSIRRNALQHKIYCTTTIAAGQAICEALKFGPEKTVRR- 1063

Query: 1166 ALQDF 1170
             LQD 
Sbjct: 1064 -LQDL 1067


>gi|390992143|ref|ZP_10262387.1| carbamoyl-phosphate synthase, large subunit [Xanthomonas axonopodis
            pv. punicae str. LMG 859]
 gi|372553138|emb|CCF69362.1| carbamoyl-phosphate synthase, large subunit [Xanthomonas axonopodis
            pv. punicae str. LMG 859]
          Length = 1080

 Score = 1260 bits (3260), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 626/1073 (58%), Positives = 802/1073 (74%), Gaps = 21/1073 (1%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTDL+ ILI+GAGPIVIGQACEFDYSG QACKAL++EGY V+L+NSNPATIMTDP +AD
Sbjct: 3    KRTDLKTILIIGAGPIVIGQACEFDYSGAQACKALRDEGYRVVLVNSNPATIMTDPNMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
              YI P+  + VE+++ KE+PDALLPTMGGQTALN A+ LA+ G LEKY VELIGAK + 
Sbjct: 63   AVYIEPINWQTVEKIIAKEKPDALLPTMGGQTALNCALDLADHGVLEKYNVELIGAKRET 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I+ AEDR+LF+ AM  IG+  P + + +TL+E + I   +G +P IIRP+FTLGG+GGGI
Sbjct: 123  IRMAEDRELFRVAMGEIGLDCPTAAVAHTLEEALEIQTRVG-YPTIIRPSFTLGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EE   I   GL  S T++VLVE+S+LGWKE+E+EV+RD ADN +I+C+IEN+DPMG
Sbjct: 182  AYNREELIEIVGRGLELSPTTEVLVEESVLGWKEFEMEVVRDTADNCIIVCAIENLDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQRLRD SIA++R+IGV+ GGSNVQF ++P  G V+VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQRLRDASIAVLRKIGVDTGGSNVQFGISPTTGRVVVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKK-TPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ N+IT   TPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGYTLDELKNEITGGLTPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVK-ELDWD 505
            FAFEKFP ++  LTTQMKSVGE MA+GRTF ES QKALR LE G  G   + +    + D
Sbjct: 362  FAFEKFPQADARLTTQMKSVGEVMAMGRTFSESLQKALRGLETGKIGLDPTGLDLSSEDD 421

Query: 506  WEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQS 565
               LK  L+ P P+R+  +  A + GM V +++ LSFID WFL Q +E++  EQ L    
Sbjct: 422  IATLKRELKAPGPERLFYVADAFRAGMTVADVYALSFIDPWFLDQIEEIVSHEQQLADDG 481

Query: 566  VSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANT 625
            ++ +       +KR GFSD ++A    S E+ VR  R +L V P YKRVD+CAAEF  +T
Sbjct: 482  MAALDAPRLRMLKRAGFSDARMAQLIGSNEESVRTLRRALKVRPVYKRVDSCAAEFATST 541

Query: 626  PYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNS 685
             Y+YS+Y+ ECE+ PT + K++ILGGGPNRIGQGIEFDYCC H + +L+  G+ETIM+N 
Sbjct: 542  AYLYSTYEDECEALPTDRDKIMILGGGPNRIGQGIEFDYCCVHAALALRDDGFETIMVNC 601

Query: 686  NPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEH 745
            NPETVSTDYDTSDRLYFEPLT+EDVL +++LE+P+G+IVQ+GGQTPLKL+          
Sbjct: 602  NPETVSTDYDTSDRLYFEPLTLEDVLEIVELEKPKGVIVQYGGQTPLKLA---------- 651

Query: 746  RLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEI 805
            R   A+G   V + GTSPDSID AEDRERF  ++ +L ++QP   IA++  +AL +A+EI
Sbjct: 652  RALEANG---VPVIGTSPDSIDLAEDRERFQQLVDKLGLKQPPNRIARNAEEALVLAREI 708

Query: 806  GYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALA 865
            GYP+VVRPSYVLGGRAMEIVY +  L  Y+ +AV+V  + PVL+D++L +A+E+DVD +A
Sbjct: 709  GYPLVVRPSYVLGGRAMEIVYGESDLARYVRDAVKVSNDSPVLLDRFLDNAVEVDVDIIA 768

Query: 866  DSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMN 925
            D  GNV+IGG+MEHIE+AGVHSGDS+C +P  ++S      +    + LA+ LNV GLMN
Sbjct: 769  DKDGNVLIGGVMEHIEEAGVHSGDSSCSLPPYSLSPQTQAELRRQVVMLAEGLNVVGLMN 828

Query: 926  CQYAITT--SGD--VYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKE 981
             Q+A+    +GD  VYLLE NPRASRTVPFVSKAIG PLAK AA  M+GK+L + G TKE
Sbjct: 829  TQFAVQVNEAGDDIVYLLEVNPRASRTVPFVSKAIGMPLAKIAARCMAGKTLAEQGATKE 888

Query: 982  VIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLS 1041
            ++P + SVKEA+ PF KFQG D +LGPEMRSTGEVMG+  SF  AFA+AQ A G K P  
Sbjct: 889  IVPDYYSVKEAIFPFAKFQGVDPILGPEMRSTGEVMGVGRSFSAAFARAQEAGGIKAPPL 948

Query: 1042 GTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAG 1101
            G  F+S+ D  K  +  +A+A ++ GF +V+T GT  +L+  G++ E V K+ EGRPH  
Sbjct: 949  GKAFVSVRDPDKQRVLPVAQALVERGFTLVATRGTGAWLQQNGLSCEIVNKVAEGRPHIV 1008

Query: 1102 DMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAI 1154
            D + NG+I  +V T+ G +    D   +RR  L ++V   TTV+GA A  +++
Sbjct: 1009 DSIKNGEIVYIVNTTEGRAAIS-DSFSIRREALQHRVTYSTTVAGAKALVQSL 1060


>gi|381400361|ref|ZP_09925331.1| carbamoyl phosphate synthase large subunit [Kingella kingae PYKK081]
 gi|380834581|gb|EIC14416.1| carbamoyl phosphate synthase large subunit [Kingella kingae PYKK081]
          Length = 1070

 Score = 1260 bits (3260), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 625/1077 (58%), Positives = 805/1077 (74%), Gaps = 24/1077 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTDL+ ILI+GAGPIVIGQACEFDYSG QACKAL+EEGY+VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDLKSILIIGAGPIVIGQACEFDYSGAQACKALREEGYKVILVNSNPATIMTDPNMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  + VE+++ KERPDA+LPTMGGQTALN A+ LA +G L KY VELIGA  DA
Sbjct: 63   VTYIEPIMWQTVEKIIVKERPDAILPTMGGQTALNCALDLARNGVLAKYNVELIGATEDA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  FK AM  IG+ TP S I +T++E +    E+G FP +IRP+FT+GG+GGGI
Sbjct: 123  IDKAEDRGRFKDAMAKIGLNTPKSFICHTMNEALRAQEEVG-FPTLIRPSFTMGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYNK+EF AIC+ G  AS T ++L+E+S+LGWKEYE+EV+RD  DN +I+CSIEN DPMG
Sbjct: 182  AYNKDEFLAICERGFDASPTHELLIERSVLGWKEYEMEVVRDKKDNCIIVCSIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGV+ GGSNVQFAVNP +GE++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQIMRNASLAVLREIGVDTGGSNVQFAVNPANGEMIVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VG++LD++ NDIT  +TPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGFTLDELRNDITGGRTPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            FAFEKFP ++  LTTQMKSVGE MA+GRT QESFQKALR LE G  G+   +      D 
Sbjct: 362  FAFEKFPAADDTLTTQMKSVGEVMAMGRTIQESFQKALRGLETGLYGFNPRS-----QDK 416

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
             +++  L  P  +RM  +  A + G  + EI+++  ID WFL Q ++L+  EQ +++ S+
Sbjct: 417  AEIRRELATPRAERMLFVVDAFRAGFSIQEIYDICKIDFWFLAQIEDLVKEEQKIVSGSL 476

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
             ++  +    +KR+GFSDK+IA      EK+VRE R SL + P YKRVDTCAAEF+ +T 
Sbjct: 477  QDLDFNTLRRLKRKGFSDKRIAQLLGLPEKDVREHRYSLNLHPVYKRVDTCAAEFDTDTA 536

Query: 627  YMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSN 686
            Y+YS+Y+ ECE+ P+ +KKV+ILGGGPNRIGQGIEFDYCC H + +L+ +G+ETIM+N N
Sbjct: 537  YLYSTYEEECEARPSDRKKVMILGGGPNRIGQGIEFDYCCVHAALALRESGFETIMVNCN 596

Query: 687  PETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHR 746
            PETVSTD+DTSDRLYFEPLT+EDVL ++  E P G+IV +GGQTPLKL+           
Sbjct: 597  PETVSTDFDTSDRLYFEPLTLEDVLEIVRKENPWGVIVHYGGQTPLKLA----------- 645

Query: 747  LPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEIG 806
              +A  +  V I GTS DSIDAAEDRERF  ++ EL + QP   IA++E +AL +A+EIG
Sbjct: 646  --NALVENGVNIIGTSADSIDAAEDRERFQQVLNELGLRQPPNRIARNETEALTLAEEIG 703

Query: 807  YPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALAD 866
            YP+VVRPSYVLGGRAM++V++ E L  Y+  AV+V  + PVL+D +L++AIE+DVD ++D
Sbjct: 704  YPLVVRPSYVLGGRAMQVVHSAEQLQRYMREAVQVSEDSPVLLDFFLNNAIEVDVDCVSD 763

Query: 867  SCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNC 926
                VVIGGIM+H+EQAG+HSGDSAC +P  ++S    D I   T  +A  LNV GLMN 
Sbjct: 764  G-KEVVIGGIMQHVEQAGIHSGDSACSLPPYSLSVEIQDEIRRQTKAMAFALNVKGLMNV 822

Query: 927  QYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPKH 986
            Q+A+   G V++LE NPRASRTVPFVSKA   PLAK  A  M+G SL +  FT E+IP  
Sbjct: 823  QFAV-QDGVVFVLEVNPRASRTVPFVSKATSVPLAKIGARAMAGISLQEQNFTAEIIPDF 881

Query: 987  VSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVFL 1046
             +VKEAV PF KF G D +LGPEMRSTGEVMG+  +F  ++ KAQ+ AG++   +G VF+
Sbjct: 882  YAVKEAVFPFIKFPGVDTILGPEMRSTGEVMGVAETFGESYLKAQLGAGERFGKTGKVFI 941

Query: 1047 SLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVAN 1106
            ++ D  KP + + AK F  +G+ + +T GTA +L   GI  + V K+ EGRPH  DM+ N
Sbjct: 942  AVRDEDKPLILQTAKNFQALGYGLCATRGTAAYLAEHGIIAQPVNKVREGRPHIVDMIKN 1001

Query: 1107 GQIQMMVITSSGDSLDQI-DGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTV 1162
            G+I  +VI +SG + ++I D  ++RR  L+ +VP  TTV+G  A +  +++L    V
Sbjct: 1002 GEI-ALVINTSGSTGNEISDSQEIRRSALSQRVPQYTTVAGGEAISFGVKALSDTHV 1057


>gi|398864707|ref|ZP_10620238.1| carbamoyl-phosphate synthase, large subunit [Pseudomonas sp. GM78]
 gi|398244658|gb|EJN30201.1| carbamoyl-phosphate synthase, large subunit [Pseudomonas sp. GM78]
          Length = 1073

 Score = 1260 bits (3260), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 630/1088 (57%), Positives = 803/1088 (73%), Gaps = 28/1088 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILILGAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPAMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  + V +++EKERPDALLPTMGGQTALN A+ L   G LEK+GVE+IGA  D 
Sbjct: 63   ATYIEPIKWQTVAKIIEKERPDALLPTMGGQTALNCALDLEREGVLEKFGVEMIGANADT 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  F +AMK+IG+  P SGI ++++E  ++  ++G FP IIRP+FT+GGTGGGI
Sbjct: 123  IDKAEDRSRFDKAMKSIGLACPRSGIAHSMEEANAVLEKLG-FPCIIRPSFTMGGTGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEFE IC  GL  S T ++L+++SL+GWKEYE+EV+RD  DN +I+CSIEN DPMG
Sbjct: 182  AYNREEFEEICARGLDLSPTKELLIDESLIGWKEYEMEVVRDKKDNCIIVCSIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ LR+ S+A++REIGVE GGSNVQF + P  G ++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQILRNASLAVLREIGVETGGSNVQFGICPNTGRMVVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT  KTPASFEPSIDYVVTK+PR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGYTLDELSNDITGGKTPASFEPSIDYVVTKLPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGW----GCSNVKEL 502
            FAFEKF  ++  LTTQMKSVGE MA+GRTFQES QKALR LE G  G       SN + +
Sbjct: 362  FAFEKFAKADARLTTQMKSVGEVMAIGRTFQESLQKALRGLEVGVCGLDEKVDLSNPESM 421

Query: 503  DWDWEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLL 562
                  LK  L VP  +R+  +  AM+ GM V++I  ++ ID WFL Q ++LI  E+ + 
Sbjct: 422  SV----LKRELTVPGAERIWYVADAMRAGMSVEDIFGMTMIDPWFLVQMEDLIKDEEKVK 477

Query: 563  TQSVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFE 622
            T  ++++ +D  + +KR+GFSD ++A     TEK +R  R  L + P YKRVDTCAAEF 
Sbjct: 478  TLGLTSIDRDLMFRLKRKGFSDMRLAKLLGVTEKSLRAHRHKLDIFPVYKRVDTCAAEFA 537

Query: 623  ANTPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIM 682
             +T Y+YS+Y+ ECE+AP+ + K++ILGGGPNRIGQGIEFDYCC H + +L+  GYETIM
Sbjct: 538  TDTAYLYSTYEEECEAAPSGRDKIMILGGGPNRIGQGIEFDYCCVHAALALRDDGYETIM 597

Query: 683  MNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYL 742
            +N NPETVSTDYDTSDRLYFEP+T+EDVL ++ +E+P+G+IVQ+GGQTPLKL+       
Sbjct: 598  VNCNPETVSTDYDTSDRLYFEPVTLEDVLEIVRVEKPKGVIVQYGGQTPLKLA------- 650

Query: 743  DEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIA 802
               R   A+G   V I GTSPD+ID AEDRERF  +++ L++ QP     +SE +A+  A
Sbjct: 651  ---RALEAAG---VPIIGTSPDAIDRAEDRERFQQMVQRLNLRQPPNATVRSEDEAIRAA 704

Query: 803  KEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVD 862
             +IGYP+VVRPSYVLGGRAMEIVY +E L  YL  AV+V  + PVL+D +L+ AIE+DVD
Sbjct: 705  AKIGYPLVVRPSYVLGGRAMEIVYEEEELKRYLREAVQVSNDSPVLLDHFLNCAIEMDVD 764

Query: 863  ALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCG 922
            A+ D   +VVIG IM+HIEQAGVHSGDSAC +P  ++ +   D +     K+A  L V G
Sbjct: 765  AVCDG-KDVVIGAIMQHIEQAGVHSGDSACSLPPYSLPAHIQDEMREQVKKMALELGVVG 823

Query: 923  LMNCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEV 982
            LMN Q A+    D+Y++E NPRASRTVPFVSK IG  LA  AA VM+GK+L +LGFTKE+
Sbjct: 824  LMNVQLALQGE-DIYVIEVNPRASRTVPFVSKCIGVSLAMIAARVMAGKTLKELGFTKEI 882

Query: 983  IPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSG 1042
            IP   SVKEAV PF KF G D +LGPEM+STGEVMG+  +F  AFAKAQ+ A + LP  G
Sbjct: 883  IPNFYSVKEAVFPFAKFPGVDPILGPEMKSTGEVMGVGDTFGEAFAKAQMGASEVLPTGG 942

Query: 1043 TVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGD 1102
            T F+S+ D  KP +  +A+  +++GF++V+T+GTA  +E  G+ V RV K+ EGRPH  D
Sbjct: 943  TAFISVRDDDKPLVAGVARDLINLGFEVVATAGTAKLIEAAGLKVRRVNKVTEGRPHVVD 1002

Query: 1103 MVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTV 1162
            M+ N ++ +++ T+ G      D   +RR  L +K+   TT++   A  EA++     TV
Sbjct: 1003 MIKNDEVTLIINTTEGRQ-SIADSYSIRRNALQHKIYCTTTIAAGEAICEALKFGPEKTV 1061

Query: 1163 TMTALQDF 1170
                LQD 
Sbjct: 1062 RR--LQDL 1067


>gi|398891858|ref|ZP_10645132.1| carbamoyl-phosphate synthase, large subunit [Pseudomonas sp. GM55]
 gi|398186415|gb|EJM73791.1| carbamoyl-phosphate synthase, large subunit [Pseudomonas sp. GM55]
          Length = 1073

 Score = 1259 bits (3259), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 630/1088 (57%), Positives = 804/1088 (73%), Gaps = 28/1088 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILILGAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPAMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  + V +++EKERPDALLPTMGGQTALN A+ L   G LEK+GVE+IGA  D 
Sbjct: 63   ATYIEPIKWQTVAKIIEKERPDALLPTMGGQTALNCALDLEREGVLEKFGVEMIGANADT 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  F +AMK+IG+  P SGI ++++E  ++  ++G FP IIRP+FT+GGTGGGI
Sbjct: 123  IDKAEDRSRFDKAMKSIGLACPRSGIAHSMEEANAVLEKLG-FPCIIRPSFTMGGTGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEFE IC  GL  S T ++L+++SL+GWKEYE+EV+RD  DN +I+CSIEN DPMG
Sbjct: 182  AYNREEFEEICARGLDLSPTKELLIDESLIGWKEYEMEVVRDKKDNCIIVCSIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ LR+ S+A++REIGVE GGSNVQF + P  G ++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQILRNASLAVLREIGVETGGSNVQFGICPNTGRMVVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT  KTPASFEPSIDYVVTK+PR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGYTLDELSNDITGGKTPASFEPSIDYVVTKLPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            FAFEKF  ++  LTTQMKSVGE MA+GRTFQES QKALR LE G  G      +++D   
Sbjct: 362  FAFEKFAKADARLTTQMKSVGEVMAIGRTFQESLQKALRGLEVGVCGLD----EKVDLGN 417

Query: 507  EQ----LKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLL 562
             +    LK  L VP  +R+  +  AM+ GM V++I  ++ ID WFL Q ++LI  E+ + 
Sbjct: 418  PESMSVLKRELTVPGAERIWYVADAMRAGMSVEDIFGMTMIDPWFLVQMEDLIKDEEKVK 477

Query: 563  TQSVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFE 622
            T  ++++ +D  + +KR+GFSD ++A     TEK +R  R  L V P YKRVDTCAAEF 
Sbjct: 478  TLGLTSIDRDLMFRLKRKGFSDMRLAKLLGVTEKSLRAHRHKLEVFPVYKRVDTCAAEFA 537

Query: 623  ANTPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIM 682
             +T Y+YS+Y+ ECE+AP+ + K++ILGGGPNRIGQGIEFDYCC H + +L+  GYETIM
Sbjct: 538  TDTAYLYSTYEEECEAAPSGRDKIMILGGGPNRIGQGIEFDYCCVHAALALRDDGYETIM 597

Query: 683  MNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYL 742
            +N NPETVSTDYDTSDRLYFEP+T+EDVL ++ +E+P+G+IVQ+GGQTPLKL+       
Sbjct: 598  VNCNPETVSTDYDTSDRLYFEPVTLEDVLEIVRVEKPKGVIVQYGGQTPLKLA------- 650

Query: 743  DEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIA 802
               R   A+G   V I GTSPD+ID AEDRERF  +++ L++ QP     +SE +A+  A
Sbjct: 651  ---RALEAAG---VPIIGTSPDAIDRAEDRERFQQMVQRLNLRQPPNATVRSEDEAIRAA 704

Query: 803  KEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVD 862
             +IGYP+VVRPSYVLGGRAMEIVY +E L  YL  AV+V  + PVL+D +L+ AIE+DVD
Sbjct: 705  SKIGYPLVVRPSYVLGGRAMEIVYEEEELKRYLREAVQVSNDSPVLLDHFLNCAIEMDVD 764

Query: 863  ALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCG 922
            A+ D   +VVIG IM+HIEQAGVHSGDSAC +P  ++ +   D +     K+A  L V G
Sbjct: 765  AVCDG-KDVVIGAIMQHIEQAGVHSGDSACSLPPYSLPAHIQDEMREQVKKMALELGVVG 823

Query: 923  LMNCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEV 982
            LMN Q A+    D+Y++E NPRASRTVPFVSK IG  LA  AA VM+GK+L +LGFTKE+
Sbjct: 824  LMNVQLALQGE-DIYVIEVNPRASRTVPFVSKCIGVSLAMIAARVMAGKTLKELGFTKEI 882

Query: 983  IPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSG 1042
            IP   SVKEAV PF KF G D +LGPEM+STGEVMG+  +F  AFAKAQ+ A + LP  G
Sbjct: 883  IPNFYSVKEAVFPFAKFPGVDPILGPEMKSTGEVMGVGDTFGEAFAKAQMGASEVLPTGG 942

Query: 1043 TVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGD 1102
            T F+S+ D  KP +  +A+  +++GF++V+T+GTA  +E  G+ V RV K+ EGRPH  D
Sbjct: 943  TAFISVRDDDKPLVAGVARDLINLGFEVVATAGTAKLIEAAGLKVRRVNKVTEGRPHVVD 1002

Query: 1103 MVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTV 1162
            M+ N ++ +++ T+ G      D   +RR  L +K+   TT++   A  EA++     TV
Sbjct: 1003 MIKNDEVTLIINTTEGRQ-SIADSYSIRRNALQHKIYCTTTIAAGEAICEALKFGPEKTV 1061

Query: 1163 TMTALQDF 1170
                LQD 
Sbjct: 1062 RR--LQDL 1067


>gi|436842461|ref|YP_007326839.1| pyrimidine-specific carbamoyl-phosphate synthetase (large subunit)
            [Desulfovibrio hydrothermalis AM13 = DSM 14728]
 gi|432171367|emb|CCO24738.1| pyrimidine-specific carbamoyl-phosphate synthetase (large subunit)
            [Desulfovibrio hydrothermalis AM13 = DSM 14728]
          Length = 1077

 Score = 1259 bits (3259), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 634/1093 (58%), Positives = 799/1093 (73%), Gaps = 25/1093 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++KI+++G+GPIVIGQACEFDYSGTQA KALKEEGYEVIL+NSNPATIMTDP LAD
Sbjct: 3    KRTDIKKIMLIGSGPIVIGQACEFDYSGTQALKALKEEGYEVILVNSNPATIMTDPHLAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
            RTYI P+ P  + +++EKERPDALLPT+GGQTALN A+A+AE G LEK+ VELIGA +D 
Sbjct: 63   RTYIEPIEPGTIAKIIEKERPDALLPTLGGQTALNTALAVAEMGILEKFNVELIGASVDV 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I+KAE R+LF+ AM+ IG+K P S I   LD+      EI  FP+IIRPAFTLGGTGGG+
Sbjct: 123  IEKAESRELFRAAMEKIGLKVPTSRIARNLDDVRRYGKEIS-FPIIIRPAFTLGGTGGGV 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN E+ E I   G+ ASL ++V++E+S+LGWKEYELEVMRD  DN VIICSIEN+DPMG
Sbjct: 182  AYNMEDLEEIAMQGITASLQNEVMLEESILGWKEYELEVMRDRKDNCVIICSIENIDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTD EYQ LRD S+AI+REIGVE GGSNVQFA+NP +GE+ +IEMN
Sbjct: 242  VHTGDSITVAPAQTLTDVEYQMLRDASLAIMREIGVETGGSNVQFAINPENGELAIIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRF 447
            PRVSRSSALASKATGFPIAK+AAKL++GY+LD+IPNDIT++T ASFEP+IDY V KIPRF
Sbjct: 302  PRVSRSSALASKATGFPIAKIAAKLAIGYTLDEIPNDITRETMASFEPTIDYCVIKIPRF 361

Query: 448  AFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDWE 507
             FEKFPG+E  LTT MKSVGE MA+GRTF+E  QK LRSLE G  G+G    ++ + D +
Sbjct: 362  TFEKFPGAEDYLTTAMKSVGETMAIGRTFKECLQKGLRSLEVGMPGFG-KKFEKCEIDRK 420

Query: 508  QLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFL--LTQS 565
            +L   +R PN  R+ A+  A   GM V+EI ++  ID W+L QF++L+  E+ L   T  
Sbjct: 421  ELVGLIRKPNSKRIFALRHAFLCGMSVEEIFDICKIDPWYLHQFEDLVKFEEELKAFTLE 480

Query: 566  VSNMTKDD-----FYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAE 620
            V   + ++       + K  G+SD Q+A   K TE+ VR  R  L +IP+Y  VDTCAAE
Sbjct: 481  VGMYSDNEQIPAMLKKAKEYGYSDPQLATMWKETEENVRNFRKKLDLIPTYYLVDTCAAE 540

Query: 621  FEANTPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYET 680
            FEA TPY YS+Y+   E++  + +KV+ILGGGPNRIGQGIEFDYCCCH++F+L   G  +
Sbjct: 541  FEAYTPYFYSTYEKGQEASSMEGRKVMILGGGPNRIGQGIEFDYCCCHSAFALNDMGVSS 600

Query: 681  IMMNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQ 740
            IM+NSNPETVSTDYDTSDRLYFEPLT EDVLN+I+ E+PEG+IVQFGGQTPL L++P+ +
Sbjct: 601  IMVNSNPETVSTDYDTSDRLYFEPLTYEDVLNIIEFEKPEGVIVQFGGQTPLNLAIPLLK 660

Query: 741  YLDEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALA 800
                           V I GTSPDSID AEDRERF A++++L ++QP  G A S  DA  
Sbjct: 661  -------------AGVTILGTSPDSIDRAEDRERFQALLEKLDLKQPPNGTAMSLDDAQD 707

Query: 801  IAKEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEID 860
            IAK + YP+V+RPSYVLGGR M+IVY+DE    Y   A  V PE P+LIDK+L +A+E+D
Sbjct: 708  IAKRLNYPLVLRPSYVLGGRGMDIVYSDEQFDKYFREAAVVSPEHPILIDKFLENAVEVD 767

Query: 861  VDALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNV 920
            VDAL+D      + G+MEHIE+AG+HSGDSAC++P  T+S+  +  I   TI LA+ L +
Sbjct: 768  VDALSDG-EQTYVAGVMEHIEEAGIHSGDSACVLPPHTLSAEIVKEIERQTIALAEELEI 826

Query: 921  CGLMNCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTK 980
             GLMN Q+A+     VY++E NPRASRTVPFVSKA G  LAK A  VM G  L DL    
Sbjct: 827  VGLMNIQFAVKDDV-VYIIEVNPRASRTVPFVSKATGIQLAKMATRVMLGDKLKDLDPWS 885

Query: 981  EVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPL 1040
                   SVKEAV PF KF   DV+LGPEMRSTGEVMG+D +  +AF KAQ+ AG KLPL
Sbjct: 886  MRKGGFYSVKEAVFPFNKFPNVDVMLGPEMRSTGEVMGMDYTPGLAFMKAQLGAGLKLPL 945

Query: 1041 SGTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHA 1100
             GTVF+S+ +  K  +   AK F ++GFKI++T GTA FL  +G+  E++LK++EGRPH 
Sbjct: 946  EGTVFISVKNRDKEGIVPTAKNFQELGFKILATGGTADFLNKEGVETEKILKVNEGRPHV 1005

Query: 1101 GDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSN 1160
             D + N  I +++ T SG      D  ++R+  L Y +   TTV+GA A + AI+  +  
Sbjct: 1006 VDYIKNNDIDLLINTPSGKQT-VTDSKEIRQAALLYGLAYTTTVAGAHAMSLAIKEQRGK 1064

Query: 1161 TVTMTALQDFFDV 1173
             + +  LQ + ++
Sbjct: 1065 GLDVQCLQHYHNM 1077


>gi|374704241|ref|ZP_09711111.1| carbamoyl phosphate synthase large subunit [Pseudomonas sp. S9]
          Length = 1073

 Score = 1259 bits (3259), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 627/1085 (57%), Positives = 806/1085 (74%), Gaps = 22/1085 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILILGAGPIVIGQACEFDYSG QACKALKEEG+ VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIKSILILGAGPIVIGQACEFDYSGAQACKALKEEGFRVILVNSNPATIMTDPAMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+    V +++EKERPDALLPTMGGQTALN A+ L + G LEK+GVE+IGA  D 
Sbjct: 63   ATYIEPIKWSTVAKIIEKERPDALLPTMGGQTALNCALDLEKHGVLEKFGVEMIGANADT 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  F +AMK IG+  P SGI ++++E  ++  ++G FP IIRP+FT+GGTGGGI
Sbjct: 123  IDKAEDRSRFDKAMKDIGLACPVSGIAHSMEESYAVLEKVG-FPCIIRPSFTMGGTGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEFE IC  GL  S T ++L+++SL+GWKEYE+EV+RD  DN +I+C+IEN DPMG
Sbjct: 182  AYNREEFEEICARGLDLSPTRELLIDESLIGWKEYEMEVVRDKKDNCIIVCTIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKE+Q LR+ S+A++REIGVE GGSNVQF + P  G ++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEFQILRNASLAVLREIGVETGGSNVQFGICPNTGRMVVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITK-KTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT  +TPASFEP+IDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKIAAKLAVGYTLDELSNDITGGRTPASFEPAIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCS-NVKELDWD 505
            FAFEKFP ++  LTTQMKSVGE MA+GRTFQES QKALR LE G  G     ++K+ + +
Sbjct: 362  FAFEKFPKADARLTTQMKSVGEVMAIGRTFQESLQKALRGLEVGVVGLDPKLDLKDPESE 421

Query: 506  WEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQS 565
               LK  L VP  DR+  I  A + G  V+E+  L+ ID+WFL Q ++LI  E+ + TQ 
Sbjct: 422  G-TLKRELTVPGADRIWYIGDAFRAGKTVEEVFALTNIDEWFLVQIEDLIKDEERIKTQG 480

Query: 566  VSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANT 625
            ++++ +D  +++KR+GFSD ++A     TEK +R  R  L V+P YKRVDTCAAEF  +T
Sbjct: 481  LTSIDRDVMFKLKRKGFSDARLAKLLGVTEKNLRSHRHKLKVLPVYKRVDTCAAEFATDT 540

Query: 626  PYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNS 685
             YMYS+Y+ ECE+ P+ + K++ILGGGPNRIGQGIEFDYCC H + +++  GYETIM+N 
Sbjct: 541  AYMYSTYEEECEANPSTRDKIMILGGGPNRIGQGIEFDYCCVHAALAMREDGYETIMVNC 600

Query: 686  NPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEH 745
            NPETVSTDYDTSDRLYFEP+T+EDVL ++ +E+P+G+IVQ+GGQTPLKL     + L+E 
Sbjct: 601  NPETVSTDYDTSDRLYFEPVTLEDVLEIVRVEQPKGVIVQYGGQTPLKLC----RALEEA 656

Query: 746  RLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEI 805
             +P         I GTSPD+ID AEDRERF  +++ L++ QP    A+SE +A A +K I
Sbjct: 657  GVP---------IIGTSPDAIDRAEDRERFQQMVERLNLRQPPNATARSEDEAFAASKAI 707

Query: 806  GYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALA 865
            GYP+VVRPSYVLGGRAMEIVY ++ L  Y+  AV+V  + PVL+D +L+ AIE+D+DA++
Sbjct: 708  GYPLVVRPSYVLGGRAMEIVYQEDELRRYMREAVQVSNDSPVLLDHFLNCAIEVDIDAVS 767

Query: 866  DSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMN 925
            D    VVIG IM+HIEQAGVHSGDSAC +P  ++ +   D I     K+A  LNV GLMN
Sbjct: 768  DG-EQVVIGAIMQHIEQAGVHSGDSACSLPPYSLPAHIQDEIRDQVKKMALELNVVGLMN 826

Query: 926  CQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPK 985
             Q A+    D++++E NPRASRTVPFVSK IG  LAK AA VM+GK+L ++GFTKE+IP 
Sbjct: 827  VQMAVQGE-DIFVIEVNPRASRTVPFVSKCIGESLAKVAARVMAGKTLAEIGFTKEIIPP 885

Query: 986  HVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVF 1045
              SVKEAV PF KF G D +LGPEM+STGEVMG+  SF  AF KAQ+ A + LP SG  F
Sbjct: 886  FFSVKEAVFPFAKFPGVDPILGPEMKSTGEVMGVGDSFGEAFGKAQLGASEILPNSGCAF 945

Query: 1046 LSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVA 1105
            +S+ D  KP    +A+  + +GF++V+T+GTA  +E  G+ V RV K+ EGRPH  DM+ 
Sbjct: 946  ISVRDDDKPQAADVARDLIALGFEVVATAGTAKVIEAAGLPVRRVNKVTEGRPHVVDMIK 1005

Query: 1106 NGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTVTMT 1165
            N ++ +++ T+ G      D   +RR  L +++   TT++   A  EA++     TV   
Sbjct: 1006 NDEVTLIINTTEGRQ-SIADSYSIRRNALQHRICCTTTLAAGAAICEALKFGPEKTVRR- 1063

Query: 1166 ALQDF 1170
             LQD 
Sbjct: 1064 -LQDL 1067


>gi|23013681|ref|ZP_00053549.1| COG0458: Carbamoylphosphate synthase large subunit (split gene in MJ)
            [Magnetospirillum magnetotacticum MS-1]
          Length = 1085

 Score = 1259 bits (3259), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 639/1104 (57%), Positives = 803/1104 (72%), Gaps = 45/1104 (4%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILI+GAGPIVIGQACEFDYSG QACKALK+EGY VIL+NSNPATIMTDPGLAD
Sbjct: 3    KRTDIKSILIIGAGPIVIGQACEFDYSGVQACKALKDEGYRVILVNSNPATIMTDPGLAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+TPE+V +++EKERPDALLPTMGGQTALN A+ LA+ G LEK+GVE+I AK D 
Sbjct: 63   ATYIEPITPEIVAKIIEKERPDALLPTMGGQTALNTAMKLADMGILEKFGVEMIAAKRDV 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR LF+ AM  IG+++P S +  TL E     + +G  P IIRP+FTL GTGGGI
Sbjct: 123  IAKAEDRLLFRDAMDKIGLESPKSRMVKTLQEARDALDFVG-LPAIIRPSFTLAGTGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN  E+E I   GLAAS   +VLVE+S+LGWKEYE+EV+RD  DN +IICSIENVDPMG
Sbjct: 182  AYNVAEYEHIVSGGLAASPVHEVLVEESVLGWKEYEMEVVRDKKDNCIIICSIENVDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPA TLTDKEYQ +R+ S+A++REIGV+ GGSNVQFAVNP DG + VIEMN
Sbjct: 242  VHTGDSITVAPALTLTDKEYQIMRNASLAVLREIGVDTGGSNVQFAVNPKDGRMTVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRF 447
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT  TPASFEP+IDYVVTKIPRF
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGYTLDELTNDITGCTPASFEPTIDYVVTKIPRF 361

Query: 448  AFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGW--------GCSNV 499
             FEKFPG++  LTT MKSVGEAMA+GRTFQES QK LRS+E G +G         G  ++
Sbjct: 362  TFEKFPGADTNLTTSMKSVGEAMAIGRTFQESLQKGLRSMETGLTGLDEVEIPGAGAGDM 421

Query: 500  KELDWDWEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQ 559
            K      + +K +L  P  DR+  I  A + G+ +DE+H   F DKWFL Q K ++D E 
Sbjct: 422  K------DAVKSALAQPRHDRLLVIAQAFRLGLSIDEVHAACFYDKWFLAQLKGIVDAEA 475

Query: 560  FLLTQSVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAA 619
             +  + +  +       +K+ GFSD++++  +  +  E   +R  L V P +KR+DTCAA
Sbjct: 476  EVKAKGLP-IDAPGLLRLKKMGFSDQRLSKLSGKSLVETAFRREVLNVKPVFKRIDTCAA 534

Query: 620  EFEANTPYMYSSYD------FECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSL 673
            EF ++T YMYS Y+       ECES P+ ++KV+ILGGGPNRIGQGIEFDYCC H +++L
Sbjct: 535  EFPSSTAYMYSCYEGDGVNAAECESDPSDREKVIILGGGPNRIGQGIEFDYCCVHAAYAL 594

Query: 674  QSAGYETIMMNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPE----GIIVQFGGQ 729
              AG ETIM+N NPETVSTDYDTSDRLYFEPLT E V++++  E+      G IVQFGGQ
Sbjct: 595  DEAGKETIMVNCNPETVSTDYDTSDRLYFEPLTAETVIDLVRREQSNGKVLGCIVQFGGQ 654

Query: 730  TPLKLSLPIHQYLDEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKG 789
            TPLKL+         H L +A     + I GTSPDSID AEDRERF  ++ EL ++QP  
Sbjct: 655  TPLKLA---------HALENAG----IPILGTSPDSIDLAEDRERFQKMLHELGLKQPAN 701

Query: 790  GIAKSEADALAIAKEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLI 849
            G A+S  +A+ +A++IGYPVV+RPS+VLGGRAM+IVY  E L  Y+  AV+V  + PVLI
Sbjct: 702  GTARSLEEAIKVAEKIGYPVVIRPSFVLGGRAMQIVYDHEALERYMVEAVKVSGDDPVLI 761

Query: 850  DKYLSDAIEIDVDALADSCGN-VVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTIS 908
            D YL DAIE+DVDAL D  GN V + GIM+HIE+AG+HSGDSAC +P  ++  + +  + 
Sbjct: 762  DFYLKDAIEVDVDALCD--GNQVYVAGIMQHIEEAGIHSGDSACSLPPYSLDKATIAELE 819

Query: 909  SWTIKLAKRLNVCGLMNCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVM 968
              T  +AK LNV GLMNCQYAI   GD+Y+LE NPRASRTVPFV+KA G P+AK AA VM
Sbjct: 820  RQTAAMAKALNVVGLMNCQYAI-KDGDIYILEVNPRASRTVPFVAKATGVPIAKIAARVM 878

Query: 969  SGKSLNDLGFTKEVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFA 1028
            +G++L   G +     KHV+VKEAV PF +F G D+LLGPEM+STGEVMGID  F  AFA
Sbjct: 879  AGETLASFGLSTRPELKHVAVKEAVFPFARFPGVDILLGPEMKSTGEVMGIDSDFARAFA 938

Query: 1029 KAQIAAGQKLPLSGTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGI-AV 1087
            K+Q+ AG  LP  G  F+S+ D  KP +  IA+  L++GFK+++T GTA +L+ +G+  V
Sbjct: 939  KSQLGAGTNLPTEGGAFISVRDGDKPAMVEIARRLLEMGFKVMATDGTAFYLKDRGVTGV 998

Query: 1088 ERVLKMHEGRPHAGDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGA 1147
              V K+ EGRPH  D + NGQ+Q++V T+ G    + D   +RR  L   +P  TTV+GA
Sbjct: 999  TIVNKVLEGRPHCVDAMMNGQVQLVVNTTEGSQAVK-DSFSIRRTALTNNIPHYTTVAGA 1057

Query: 1148 LANAEAIRSLKSNTVTMTALQDFF 1171
             A  EAI +++  T+ +  LQ +F
Sbjct: 1058 RAAVEAIEAMRCGTLDVAPLQSYF 1081


>gi|399019566|ref|ZP_10721712.1| carbamoyl-phosphate synthase, large subunit [Herbaspirillum sp.
            CF444]
 gi|398097457|gb|EJL87761.1| carbamoyl-phosphate synthase, large subunit [Herbaspirillum sp.
            CF444]
          Length = 1077

 Score = 1259 bits (3259), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 642/1081 (59%), Positives = 807/1081 (74%), Gaps = 29/1081 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KR D++ ILI+GAGPI+IGQACEFDYSG QACKAL+EEGY+VIL+NSNPATIMTDP +AD
Sbjct: 3    KRNDIKSILIIGAGPIIIGQACEFDYSGAQACKALREEGYKVILVNSNPATIMTDPEMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+T ++VE+++ KE+PDA+LPTMGGQTALN A+ L  +G LEKYG ELIGA  +A
Sbjct: 63   VTYIEPITWQVVERIIAKEKPDAILPTMGGQTALNCALDLHRNGVLEKYGCELIGASPEA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  FK AM  IG+ +  SG+ +T++E  ++  E+G FP+IIRP+FT+GGTGGGI
Sbjct: 123  IDKAEDRSKFKDAMTKIGLGSARSGVSHTMEESWAVQKELG-FPVIIRPSFTMGGTGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN EEFE ICK GL AS T+++L+E+SL+GWKEYE+EV+RD ADN +I+CSIEN+DPMG
Sbjct: 182  AYNAEEFETICKRGLEASPTTELLIEESLIGWKEYEMEVVRDKADNCIIVCSIENLDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGV+ GGSNVQF+VNP DG ++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQIMRNASLAVLREIGVDTGGSNVQFSVNPADGRMIVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VG++LD++ N+IT   TPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKIAAKLAVGFTLDELRNEITGGATPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            FAFEKFP ++  LTTQMKSVGE MA+GRTFQESFQKALR LE G  G     + E   D 
Sbjct: 362  FAFEKFPQADNHLTTQMKSVGEVMAIGRTFQESFQKALRGLEVGVDG-----MNEKTTDH 416

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLT-QS 565
            E +K  L  P PDR+  +  A  +G  ++E+H L+ ID WFL+Q KE++D+E +L   Q+
Sbjct: 417  ETIKEELGEPGPDRIWYVGDAFAQGFTLEEVHGLTHIDPWFLSQIKEIVDIELWLENGQT 476

Query: 566  VSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANT 625
            +  + K   Y++K++GF+D+++A   K T+  VREKR +L + P YKRVDTCA EF  NT
Sbjct: 477  LDGLDKATLYKLKQKGFADRRLAKLLKVTDTAVREKRHALNIRPVYKRVDTCAGEFSTNT 536

Query: 626  PYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNS 685
             YMYS+Y+ ECES P  KKK+++LGGGPNRIGQGIEFDYCC H + +++  GYETIM+N 
Sbjct: 537  AYMYSTYEEECESKPNDKKKIMVLGGGPNRIGQGIEFDYCCVHAALAMREDGYETIMVNC 596

Query: 686  NPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEH 745
            NPETVSTDYDTSDRLYFE LT+EDVL ++ LE+P G+IVQ+GGQTPLKL+L +       
Sbjct: 597  NPETVSTDYDTSDRLYFESLTLEDVLEIVALEKPYGVIVQYGGQTPLKLALDLE------ 650

Query: 746  RLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEI 805
                A+G   V I GTSPD IDAAEDRERF  ++ +L + QP    A++EADAL +A+EI
Sbjct: 651  ----ANG---VPIVGTSPDMIDAAEDRERFQKLLHDLGLRQPPNRTARTEADALRLAQEI 703

Query: 806  GYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALA 865
            GYP+VVRPSYVLGGRAMEIV+    L  Y+  AV+V  + PVL+D++L+DAIE+DVD L+
Sbjct: 704  GYPLVVRPSYVLGGRAMEIVHEQRDLERYMREAVKVSHDSPVLLDRFLNDAIEVDVDCLS 763

Query: 866  DSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMN 925
            D      IGG+MEHIEQAGVHSGDSAC +P  +++   +D +   T  +AK LNV GLMN
Sbjct: 764  DG-ERTFIGGVMEHIEQAGVHSGDSACSLPPYSLAKETIDELKRQTALMAKGLNVVGLMN 822

Query: 926  CQYAI-TTSGD------VYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGF 978
             Q+AI  T  D      V++LE NPRASRTVPFVSKA G  LAK AA  M G+SL+  G 
Sbjct: 823  VQFAIQQTEVDGKLQDVVFVLEVNPRASRTVPFVSKATGLQLAKIAARCMVGQSLDSQGI 882

Query: 979  TKEVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKL 1038
              EVIP + SVKEAV PF KF G D +LGPEM+STGEVMG+  +F  AF K+Q+ AG KL
Sbjct: 883  KNEVIPPYFSVKEAVFPFVKFPGVDTILGPEMKSTGEVMGVGKTFGEAFVKSQLGAGVKL 942

Query: 1039 PLSGTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRP 1098
            P SG VFLS+    KP   ++AK  + +GF IV+T GTA  +   GI V  V K+ EGRP
Sbjct: 943  PTSGKVFLSVKGSDKPRAVQVAKDLVGLGFSIVATKGTAAAISAAGIPVTTVNKVVEGRP 1002

Query: 1099 HAGDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLK 1158
            H  DM+ N +I ++V T         D   +R   LA +V   TT++GA A  E +R L 
Sbjct: 1003 HIVDMIKNNEIALVVNTVEEKRTAIADSGAIRTSALAARVTTFTTIAGAEAAVEGMRHLD 1062

Query: 1159 S 1159
            +
Sbjct: 1063 A 1063


>gi|239906852|ref|YP_002953593.1| carbamoyl-phosphate synthase large chain [Desulfovibrio magneticus
            RS-1]
 gi|239796718|dbj|BAH75707.1| carbamoyl-phosphate synthase large chain [Desulfovibrio magneticus
            RS-1]
          Length = 1078

 Score = 1259 bits (3259), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 633/1092 (57%), Positives = 813/1092 (74%), Gaps = 27/1092 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++KI+I+G+GPIVIGQACEFDYSG+QA KALKEEGYEV+L+NSNPATIMTDPGLAD
Sbjct: 3    KRTDIKKIMIIGSGPIVIGQACEFDYSGSQAAKALKEEGYEVVLVNSNPATIMTDPGLAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
            RTYI P+ P  V +++ +ERPDALLPT+GGQT LN AVALAESG L++YGV+L+GA LD 
Sbjct: 63   RTYIEPIEPGTVARIIARERPDALLPTLGGQTGLNTAVALAESGVLDEYGVDLLGASLDV 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            IKKAE R+LF+ AM  IG+K P SGI +T+++       I  FP+I+RPA+TLGGTGGG+
Sbjct: 123  IKKAESRELFRIAMDNIGLKIPQSGICHTMEDVKEWGKRI-PFPIIVRPAYTLGGTGGGV 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+E+ E I   GLAAS+ S++++E+S++GWKE+ELEVMRD ADN VIICSIEN+DPMG
Sbjct: 182  AYNQEDLEKIASVGLAASMKSEIMLERSIIGWKEFELEVMRDKADNCVIICSIENIDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTD EYQ++R+ +IAI+REIGVE GGSNVQFAVNP DGE+++IEMN
Sbjct: 242  VHTGDSITVAPAQTLTDDEYQQMRNAAIAIMREIGVETGGSNVQFAVNPADGEMVIIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRF 447
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD+IPNDIT++T ASFEP+IDY V KIPRF
Sbjct: 302  PRVSRSSALASKATGFPIAKIAAKLAVGYTLDEIPNDITRETMASFEPTIDYCVVKIPRF 361

Query: 448  AFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSN-VKELDWDW 506
             FEKFPGSE  LTT MKSVGEAM++GR F+E+ QK LRSLE G +G+   N V E D D 
Sbjct: 362  TFEKFPGSEDYLTTAMKSVGEAMSIGRNFKEAMQKGLRSLEIGATGFSAINDVCEADRD- 420

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
              L  +LR PN  RM  +  AM+ G+ +++I E ++ID W+L QFKE++D+E  +     
Sbjct: 421  -TLLAALRRPNSRRMFQVREAMRCGVSLEDIFEATWIDPWYLRQFKEIVDMEARIAAFPK 479

Query: 567  SNMT------KDDFYEVKRRGFSDKQIA-FATKSTEKEVREKRLSLGVIPSYKRVDTCAA 619
              ++      ++   + K+ GFSD Q+A      +  + R+ R  + + P+Y  VDTCAA
Sbjct: 480  DKISPANADCRELIADAKKNGFSDPQLATILGLPSSLDARKLRKDMSITPTYYLVDTCAA 539

Query: 620  EFEANTPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYE 679
            EFEA TPY YS+Y+   E AP   +KV+ILGGGPNRIGQGIEFDYCCCH S++L+  G E
Sbjct: 540  EFEAYTPYYYSTYETGKEVAPKAARKVVILGGGPNRIGQGIEFDYCCCHASYALREMGVE 599

Query: 680  TIMMNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIH 739
            +IM+NSNPETVSTDYDTSDRLYFEPLT EDVLN++++E+PEG+IVQFGGQTPL L++P+ 
Sbjct: 600  SIMVNSNPETVSTDYDTSDRLYFEPLTFEDVLNILEVEKPEGVIVQFGGQTPLNLAVPLL 659

Query: 740  QYLDEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADAL 799
                         +  VRI GTSPDSID AE+RERF  ++++L + QP  G A +  DA 
Sbjct: 660  -------------NAGVRILGTSPDSIDRAENRERFQTLLQKLGLRQPANGTAFTVEDAA 706

Query: 800  AIAKEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEI 859
             IA +IGYPVVVRPSYVLGGRAMEIVY    L  Y + AV    + P+LIDK+L +A E+
Sbjct: 707  TIADKIGYPVVVRPSYVLGGRAMEIVYDRADLENYFKVAVVASGKHPILIDKFLVNATEV 766

Query: 860  DVDALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLN 919
            DVDA++D   +  + G+MEHIE+AG+HSGDSAC++P  ++  + +  I   T+ LA+ L 
Sbjct: 767  DVDAVSDGT-DTYVAGVMEHIEEAGIHSGDSACVLPPHSLDPALIKEIERQTVALAEELG 825

Query: 920  VCGLMNCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFT 979
            V GLMN Q+A+   GD+Y+LE NPRASRT PFVSKA G PLAK A  V+ G+ L DL   
Sbjct: 826  VVGLMNIQFAV-KDGDIYILEVNPRASRTSPFVSKATGVPLAKLATKVIMGQKLKDLNPW 884

Query: 980  KEVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLP 1039
             E    + +VKE+V PF +F G DVLLGPEMRSTGEVMG+D    +AF K+Q+ AGQ LP
Sbjct: 885  AERKSGYYAVKESVFPFNRFPGVDVLLGPEMRSTGEVMGVDECVGLAFMKSQLGAGQVLP 944

Query: 1040 LSGTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPH 1099
              GTVFLS+ D  K  +   A+   ++GFKI++T GTA +L+ KGIAV  VLK+ EGRP+
Sbjct: 945  QQGTVFLSIADNAKDEVLPAAQILGELGFKILATKGTAAYLQGKGIAVTPVLKVFEGRPN 1004

Query: 1100 AGDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKS 1159
              D + N ++ ++V   S D     D + +R+  L Y +P  TT +GA A A+AIR L+ 
Sbjct: 1005 IVDHMKNREVDLVVNLVS-DKRTVRDSMSIRQTALLYGIPYTTTAAGARAMAQAIRELRG 1063

Query: 1160 NTVTMTALQDFF 1171
              +T+ +LQ+++
Sbjct: 1064 AGLTVKSLQEYY 1075


>gi|300310711|ref|YP_003774803.1| carbamoyl-phosphate synthase large subunit [Herbaspirillum
            seropedicae SmR1]
 gi|300073496|gb|ADJ62895.1| carbamoyl-phosphate synthase (large chain) protein [Herbaspirillum
            seropedicae SmR1]
          Length = 1077

 Score = 1259 bits (3259), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 640/1081 (59%), Positives = 810/1081 (74%), Gaps = 29/1081 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILI+GAGPI+IGQACEFDYSG QACKAL+EEG++VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIKSILIIGAGPIIIGQACEFDYSGAQACKALREEGFKVILVNSNPATIMTDPEMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+T + VE+++ KE+PDA+LPTMGGQTALN A+ L   G LEKY VELIGA  +A
Sbjct: 63   ATYIEPITWQAVERIIAKEKPDAILPTMGGQTALNCALDLHRHGVLEKYKVELIGATPEA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  FK+AM  IG+ +  SG+ +T++E  ++   IG FP+IIRP+FT+GGTGGGI
Sbjct: 123  IDKAEDRSKFKEAMTKIGLGSARSGVSHTMEESWAVQKTIG-FPVIIRPSFTMGGTGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN EEFE ICK GL AS TS++L+E+SL+GWKEYE+EV+RD ADN +I+CSIEN+DPMG
Sbjct: 182  AYNAEEFETICKRGLEASPTSELLIEESLIGWKEYEMEVVRDKADNCIIVCSIENLDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGV+ GGSNVQF+VNP DG ++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQIMRNASLAVLREIGVDTGGSNVQFSVNPADGRMIVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VG++LD++ N+IT   TPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKIAAKLAVGFTLDELRNEITGGATPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            F FEKFP ++  LTTQMKSVGE MA+GRTFQESFQKALR LE G  G     + E   D 
Sbjct: 362  FTFEKFPQADKHLTTQMKSVGEVMAIGRTFQESFQKALRGLEVGVDG-----MNEKTTDR 416

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQ-S 565
            E ++  L  P PDR+  +  A  +G  ++E+H L+ ID WFL+Q KE++D+E +L    +
Sbjct: 417  ELIEKELGEPGPDRIWYVGDAFAQGFSLEEVHGLTHIDPWFLSQIKEIVDIELWLEKDVA 476

Query: 566  VSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANT 625
            + ++ K   +++K++GFSD+++A   K+T+  VRE+R  LGV P +KRVDTCA EF  +T
Sbjct: 477  LESLDKATLFQLKQKGFSDRRLAKLLKTTDTAVREQRKKLGVRPVFKRVDTCAGEFSTDT 536

Query: 626  PYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNS 685
             YMYS+YD ECES PT KKK+++LGGGPNRIGQGIEFDYCC H + +++  GYETIM+N 
Sbjct: 537  AYMYSTYDEECESNPTDKKKIMVLGGGPNRIGQGIEFDYCCVHAALAMRDDGYETIMVNC 596

Query: 686  NPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEH 745
            NPETVSTDYDTSDRLYFEP+T+EDVL ++D E+P G+IVQ+GGQTPLKL+L +       
Sbjct: 597  NPETVSTDYDTSDRLYFEPVTLEDVLEIVDKEKPVGVIVQYGGQTPLKLALDLE------ 650

Query: 746  RLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEI 805
                A+G   V I GTSPD IDAAEDRERF  ++++L + QP    A++EADAL +A+EI
Sbjct: 651  ----ANG---VPIVGTSPDMIDAAEDRERFQKLLQDLGLRQPPNRTARTEADALQLAQEI 703

Query: 806  GYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALA 865
            GYP+VVRPSYVLGGRAMEIV+    L  Y+  AV+V  + PVL+D++L+DAIE+DVD L+
Sbjct: 704  GYPLVVRPSYVLGGRAMEIVHEQRDLERYMREAVKVSHDSPVLLDRFLNDAIEVDVDCLS 763

Query: 866  DSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMN 925
            D      IGG+MEHIEQAGVHSGDSAC +P  ++S   ++ +   T  +AK LNV GLMN
Sbjct: 764  DG-ERTFIGGVMEHIEQAGVHSGDSACSLPPYSLSKDTIEELKRQTALMAKGLNVVGLMN 822

Query: 926  CQYAITTS-------GDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGF 978
             Q+AI  S         V++LE NPRASRTVPFVSKA G  LAK AA  M G+SL+  G 
Sbjct: 823  VQFAIQQSEVDGKTVDTVFVLEVNPRASRTVPFVSKATGLQLAKIAARCMVGQSLDSQGI 882

Query: 979  TKEVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKL 1038
              EV+P + SVKEAV PF KF G D +LGPEM+STGEVMG+  +F  AF K+Q+ AG KL
Sbjct: 883  KNEVVPPYYSVKEAVFPFVKFPGVDTILGPEMKSTGEVMGVGKTFGEAFVKSQMGAGVKL 942

Query: 1039 PLSGTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRP 1098
            P SG VFLS+ +  KP   ++A+  + +GF IV+T GTA  +   GI V  V K+ EGRP
Sbjct: 943  PKSGKVFLSVKNSDKPRAVQVARDLVALGFSIVATKGTAAAISAAGIPVATVNKVVEGRP 1002

Query: 1099 HAGDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLK 1158
            H  DMV N +I ++V T         D   +R   LA +V   TT++GA A  E +R L+
Sbjct: 1003 HIVDMVKNNEIALVVNTVEEKRNAIADSGAIRTSALAARVTTFTTIAGAEAAVEGMRHLE 1062

Query: 1159 S 1159
            S
Sbjct: 1063 S 1063


>gi|429210172|ref|ZP_19201339.1| carbamoyl phosphate synthase large subunit [Pseudomonas sp. M1]
 gi|428158946|gb|EKX05492.1| carbamoyl phosphate synthase large subunit [Pseudomonas sp. M1]
          Length = 1073

 Score = 1259 bits (3258), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 626/1085 (57%), Positives = 805/1085 (74%), Gaps = 22/1085 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILILGAGPIVIGQACEFDYSG QACKALKEEG+ VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIKSILILGAGPIVIGQACEFDYSGAQACKALKEEGFRVILVNSNPATIMTDPAMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  + V +++EKERPDALLPTMGGQTALN A+ L   G LEK+GVE+IGA  D 
Sbjct: 63   ATYIEPIKWQTVAKIIEKERPDALLPTMGGQTALNCALDLERHGVLEKFGVEMIGANADT 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  F +AMK IG+  P SGI ++++E   +  ++G FP IIRP+FT+GGTGGGI
Sbjct: 123  IDKAEDRSRFDKAMKAIGLACPRSGIAHSMEEAYGVLEQVG-FPCIIRPSFTMGGTGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEFE IC  GL  S T+++L+++SL+GWKEYE+EV+RD  DN +I+CSIEN DPMG
Sbjct: 182  AYNREEFEEICARGLDLSPTNELLIDESLIGWKEYEMEVVRDKKDNCIIVCSIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGVE GGSNVQF + P  G ++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQIMRNASLAVLREIGVETGGSNVQFGICPDTGRMVVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT  +TPASFEP+IDYVVTK+PR
Sbjct: 302  PRVSRSSALASKATGFPIAKIAAKLAVGYTLDELQNDITGGRTPASFEPAIDYVVTKVPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            FAFEKFP ++  LTTQMKSVGE MA+GRTFQES QKALR LE G +G+    +   D + 
Sbjct: 362  FAFEKFPKADARLTTQMKSVGEVMAIGRTFQESVQKALRGLEVGVAGFD-PKLDLADPEA 420

Query: 507  EQ-LKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQS 565
            E  L+  L VP  +R+  +  A + G  ++E+  L+ ID+WFL Q ++LI  E+ + T  
Sbjct: 421  EGILRRELTVPGAERIWYVADAFRAGKSIEEVFALTKIDEWFLVQIEDLIKEEEKVKTLG 480

Query: 566  VSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANT 625
            +S +  D   ++KR+GFSD ++A     TEK +R  R  L V+P YKRVDTCAAEF  +T
Sbjct: 481  LSGIDADLMRKLKRKGFSDARLAKLLGVTEKNLRSHRHKLKVVPVYKRVDTCAAEFATDT 540

Query: 626  PYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNS 685
             YMYS+Y+ ECE+ P+ + K++ILGGGPNRIGQGIEFDYCC H + +++  GYETIM+N 
Sbjct: 541  AYMYSTYEEECEANPSGRDKIMILGGGPNRIGQGIEFDYCCVHAALAMREDGYETIMVNC 600

Query: 686  NPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEH 745
            NPETVSTDYDTSDRLYFEP+T+EDVL ++ +E+P+G+IVQ+GGQTPLKL     + L+E 
Sbjct: 601  NPETVSTDYDTSDRLYFEPVTLEDVLEIVRVEQPKGVIVQYGGQTPLKLC----RALEEA 656

Query: 746  RLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEI 805
             +P         I GTSPD+ID AEDRERF  +++ L++ QP    A+SE +AL+++K I
Sbjct: 657  GVP---------IIGTSPDAIDRAEDRERFQQMVQRLNLRQPANATARSEDEALSLSKNI 707

Query: 806  GYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALA 865
            GYP+VVRPSYVLGGRAMEIVY +E L  Y+  AV+V  + PVL+D++L+ AIE+D+DA+ 
Sbjct: 708  GYPMVVRPSYVLGGRAMEIVYQEEELKRYMREAVKVSNDSPVLLDRFLNCAIEVDIDAVC 767

Query: 866  DSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMN 925
            D    VVIG IM+HIEQAGVHSGDSAC +P  ++     D I     K+A  L V GLMN
Sbjct: 768  DG-ETVVIGAIMQHIEQAGVHSGDSACSLPPYSLPRHIQDEIREQVKKMALELGVVGLMN 826

Query: 926  CQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPK 985
             Q A+    D+Y++E NPRASRTVPFVSK IG  LAK AA VM+GKSL ++GFT+EVIP 
Sbjct: 827  VQMAVQGE-DIYVIEVNPRASRTVPFVSKCIGESLAKIAARVMAGKSLAEVGFTEEVIPP 885

Query: 986  HVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVF 1045
            + SVKEAV PF KF G D +LGPEM+STGEVMG+  SF  AFAKAQ+ A + LP +G  F
Sbjct: 886  YYSVKEAVFPFAKFPGVDPILGPEMKSTGEVMGVGDSFGEAFAKAQLGASEILPNAGCAF 945

Query: 1046 LSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVA 1105
            +S+ +  KP   ++A+  + +GF++V+T+GTA  +E  G+ V RV K+ EGRPH  DM+ 
Sbjct: 946  ISVREDDKPQAVQVARDLVALGFEVVATAGTAKVIEAAGLPVRRVNKVTEGRPHVVDMIK 1005

Query: 1106 NGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTVTMT 1165
            N ++ +++ T+ G      D   +RR  L +K+   TT++   A  EA++     TV   
Sbjct: 1006 NDEVTLIINTTEGRQ-SIADSYSIRRNALQHKIYCTTTIAAGQAICEALKFGPEKTVRR- 1063

Query: 1166 ALQDF 1170
             LQD 
Sbjct: 1064 -LQDL 1067


>gi|254491827|ref|ZP_05105006.1| carbamoyl-phosphate synthase, large subunit [Methylophaga thiooxidans
            DMS010]
 gi|224463305|gb|EEF79575.1| carbamoyl-phosphate synthase, large subunit [Methylophaga thiooxydans
            DMS010]
          Length = 1072

 Score = 1259 bits (3258), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 620/1056 (58%), Positives = 794/1056 (75%), Gaps = 22/1056 (2%)

Query: 86   LGKRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGL 145
            + KRTD++ ILILGAGPIVIGQACEFDYSG QACKALKEEGY VIL+NSNPATIMTDP +
Sbjct: 1    MAKRTDIQSILILGAGPIVIGQACEFDYSGAQACKALKEEGYRVILVNSNPATIMTDPNM 60

Query: 146  ADRTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKL 205
            AD TYI P+  + V +V+E ERPDA+LPTMGGQTALN A+ L + G LEK+GVE+IGA  
Sbjct: 61   ADATYIEPVNWQAVSKVIEAERPDAILPTMGGQTALNCALDLEKHGILEKFGVEMIGADS 120

Query: 206  DAIKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGG 265
            +AI KAEDRDLF+ AM+ IG+  P S I +TLDE + +  + G FP+IIRP+FT+GG+GG
Sbjct: 121  EAINKAEDRDLFRAAMRKIGLDMPKSDIAHTLDEALEVQGQFG-FPVIIRPSFTMGGSGG 179

Query: 266  GIAYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDP 325
            GIAYNK++F  IC+ GL  S TS++L+E+S++GWKEYE+EV+RD  DN +IICSIEN DP
Sbjct: 180  GIAYNKQDFIEICQRGLYLSPTSELLIEESIIGWKEYEMEVVRDRKDNCIIICSIENFDP 239

Query: 326  MGVHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIE 385
            MGVHTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGV+ GGSNVQFAVNP  G +++IE
Sbjct: 240  MGVHTGDSITVAPAQTLTDKEYQIMRNASLAVLREIGVDTGGSNVQFAVNPESGRLIIIE 299

Query: 386  MNPRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKI 444
            MNPRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ N+IT   TPASFEPSIDYVVTK+
Sbjct: 300  MNPRVSRSSALASKATGFPIAKVAAKLAVGYTLDELQNEITGNATPASFEPSIDYVVTKV 359

Query: 445  PRFAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDW 504
            PRF FEKFP ++  L+TQMKSVGE MA+GR FQES QKALR LE      G + + +L+ 
Sbjct: 360  PRFTFEKFPQADNRLSTQMKSVGEVMAIGRNFQESLQKALRGLE--IDKDGLTEIIDLNE 417

Query: 505  D--WEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLL 562
            +   E L+  L +P  DR+  +  A + G   +E+  LS ID WFL Q +EL+ +E  L 
Sbjct: 418  ENIEETLRRELSLPGSDRLWYVADAFRFGFSFEEVQRLSHIDPWFLVQVEELVTIENELK 477

Query: 563  TQSVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFE 622
             +S++++ +   + +KR+GFSD ++A   + TEK+VRE R  + + P YKRVDTCAAEF 
Sbjct: 478  ERSLNDLDQSQMFALKRKGFSDSRLAKLLQKTEKQVREYRQEMQIRPVYKRVDTCAAEFA 537

Query: 623  ANTPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIM 682
             +T YMYS+YD ECE+ PT + K++ILGGGPNRIGQGIEFDYCC H + +L+  GYETIM
Sbjct: 538  TSTAYMYSTYDMECEANPTDRDKIMILGGGPNRIGQGIEFDYCCVHAALALREDGYETIM 597

Query: 683  MNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYL 742
            +N NPETVSTDYDTSDRLYFE LT+EDVL ++DLE+P+G+IVQFGGQTPLKL+       
Sbjct: 598  VNCNPETVSTDYDTSDRLYFESLTLEDVLEIVDLEKPKGVIVQFGGQTPLKLA------- 650

Query: 743  DEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIA 802
               R   A+G   V I GTSPD+ID AEDRERF  ++ +L++ QP   +A S   A+A+A
Sbjct: 651  ---RALEAAG---VPIIGTSPDAIDHAEDRERFQQMVDKLNLLQPPNRLAHSADTAVALA 704

Query: 803  KEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVD 862
             EIGYP+VVRPSYVLGGRAMEIVY ++ L  Y++NAV+V  + PVL+D++L DAIE+DVD
Sbjct: 705  SEIGYPLVVRPSYVLGGRAMEIVYNEDELQRYMQNAVKVSNDSPVLLDRFLDDAIEVDVD 764

Query: 863  ALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCG 922
            A+ D    V+IGGIMEHIEQAGVHSGDSAC IP  ++S++  D +     ++A  L V G
Sbjct: 765  AICDG-KEVLIGGIMEHIEQAGVHSGDSACAIPPYSLSNAIQDKLREQVRQMALELGVKG 823

Query: 923  LMNCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEV 982
            LMN Q+AI    ++Y+LE NPRASRTVP++SK+IG PLAK AA  M+G+SL++ G  KE+
Sbjct: 824  LMNTQFAI-KGDEIYILEVNPRASRTVPYISKSIGVPLAKVAARTMAGRSLDEQGVNKEI 882

Query: 983  IPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSG 1042
            +P + SVKEAV PF KFQG D +LGPEM+STGEVMG+  SF  AFAK+Q+AA   LP  G
Sbjct: 883  VPSYYSVKEAVFPFIKFQGVDPILGPEMKSTGEVMGVGRSFGEAFAKSQLAASVVLPTGG 942

Query: 1043 TVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGD 1102
              F+S+ +  K    +IAK    +GF +++T GT   L   G+  E V K+ EG+PH  D
Sbjct: 943  KAFISVREADKVSAVQIAKDLAALGFSLMATRGTQKVLVDAGVGCEPVNKVAEGQPHIVD 1002

Query: 1103 MVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKV 1138
            M+ N +I ++V T+ G      D  ++RR  L ++V
Sbjct: 1003 MIKNDEISLIVNTTEGRQ-SVADSREIRRAALQHQV 1037


>gi|398998972|ref|ZP_10701726.1| carbamoyl-phosphate synthase, large subunit [Pseudomonas sp. GM18]
 gi|398132813|gb|EJM22070.1| carbamoyl-phosphate synthase, large subunit [Pseudomonas sp. GM18]
          Length = 1073

 Score = 1259 bits (3258), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 630/1088 (57%), Positives = 804/1088 (73%), Gaps = 28/1088 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILILGAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPAMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  + V +++EKERPDALLPTMGGQTALN A+ L   G LEK+GVE+IGA  D 
Sbjct: 63   ATYIEPIKWQTVAKIIEKERPDALLPTMGGQTALNCALDLEREGVLEKFGVEMIGANADT 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  F +AMK+IG+  P SGI ++++E  ++ + +G FP IIRP+FT+GGTGGGI
Sbjct: 123  IDKAEDRSRFDKAMKSIGLDCPRSGIAHSMEEANAVLDRLG-FPCIIRPSFTMGGTGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEFE IC  GL  S T ++L+++SL+GWKEYE+EV+RD  DN +I+CSIEN DPMG
Sbjct: 182  AYNREEFEEICARGLDLSPTKELLIDESLIGWKEYEMEVVRDKKDNCIIVCSIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ LR+ S+A++REIGVE GGSNVQF + P  G ++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQILRNASLAVLREIGVETGGSNVQFGICPNTGRMVVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT  KTPASFEPSIDYVVTK+PR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGYTLDELSNDITGGKTPASFEPSIDYVVTKLPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            FAFEKFP ++  LTTQMKSVGE MA+GRTFQES QKALR LE G  G      ++LD   
Sbjct: 362  FAFEKFPKADARLTTQMKSVGEVMAIGRTFQESLQKALRGLEVGVCGLD----EKLDLGN 417

Query: 507  EQ----LKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLL 562
             +    LK  L VP  +R+  +  A + G+ V++I  ++ ID WFL Q ++LI  E+ + 
Sbjct: 418  PESMSILKRELTVPGAERIWYVADAFRAGLSVEDIFGMNMIDPWFLVQIEDLIKEEEKVK 477

Query: 563  TQSVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFE 622
            T  +S + +D  + +KR+GFSD+++A     TEK +R  R  L V P YKRVDTCAAEF 
Sbjct: 478  TLGLSAIDRDLMFRLKRKGFSDQRLAKLLGVTEKNLRTHRHKLEVFPVYKRVDTCAAEFA 537

Query: 623  ANTPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIM 682
             +T Y+YS+Y+ ECE+AP+ + K++ILGGGPNRIGQGIEFDYCC H + +L+  GYETIM
Sbjct: 538  TDTAYLYSTYEEECEAAPSGRDKIMILGGGPNRIGQGIEFDYCCVHAALALRDDGYETIM 597

Query: 683  MNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYL 742
            +N NPETVSTDYDTSDRLYFEP+T+EDVL ++ +E+P+G+IVQ+GGQTPLKL+       
Sbjct: 598  VNCNPETVSTDYDTSDRLYFEPVTLEDVLEIVRVEKPKGVIVQYGGQTPLKLA------- 650

Query: 743  DEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIA 802
               R   A+G   V I GTSPD+ID AEDRERF  +++ L++ QP     +SE +A+  A
Sbjct: 651  ---RALEAAG---VPIIGTSPDAIDRAEDRERFQQMVERLNLRQPPNATVRSEDEAIRAA 704

Query: 803  KEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVD 862
             +IGYP+VVRPSYVLGGRAMEIVY +E L  YL  AV+V  + PVL+D +L+ AIE+DVD
Sbjct: 705  AKIGYPLVVRPSYVLGGRAMEIVYEEEELKRYLREAVQVSNDSPVLLDHFLNCAIEMDVD 764

Query: 863  ALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCG 922
            A+ D   +VVIG IM+HIEQAGVHSGDSAC +P  ++ +   D +     K+A  L V G
Sbjct: 765  AVCDGT-DVVIGAIMQHIEQAGVHSGDSACSLPPYSLPAHIQDEMREQVKKMALELGVVG 823

Query: 923  LMNCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEV 982
            LMN Q A+    D+Y++E NPRASRTVPFVSK IG  LA  AA VM+GK+L ++GFTKE+
Sbjct: 824  LMNVQLALQGE-DIYVIEVNPRASRTVPFVSKCIGVSLAMIAARVMAGKTLKEIGFTKEI 882

Query: 983  IPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSG 1042
            IP   SVKEAV PF KF G D +LGPEM+STGEVMG+  +F  AFAKAQ+ A + LP  G
Sbjct: 883  IPNFYSVKEAVFPFAKFPGVDPILGPEMKSTGEVMGVGDTFGEAFAKAQMGASEVLPTGG 942

Query: 1043 TVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGD 1102
            T F+S+ D  KP +  +A+  +++GF++V+T+GTA  +E  G+ V RV K+ EGRPH  D
Sbjct: 943  TAFISVRDDDKPLVAGVARDLINLGFEVVATAGTAKLIEAAGLKVRRVNKVTEGRPHVVD 1002

Query: 1103 MVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTV 1162
            M+ N ++ +++ T+ G      D   +RR  L +K+   TT++   A  EA++     TV
Sbjct: 1003 MIKNDEVTLIINTTEGRQ-SIADSYSIRRNALQHKIYCTTTIAAGEAICEALKFGPEKTV 1061

Query: 1163 TMTALQDF 1170
                LQD 
Sbjct: 1062 RR--LQDL 1067


>gi|426407607|ref|YP_007027706.1| carbamoyl phosphate synthase large subunit [Pseudomonas sp. UW4]
 gi|426265824|gb|AFY17901.1| carbamoyl phosphate synthase large subunit [Pseudomonas sp. UW4]
          Length = 1073

 Score = 1259 bits (3258), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 630/1088 (57%), Positives = 803/1088 (73%), Gaps = 28/1088 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILILGAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPAMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  + V +++EKERPDALLPTMGGQTALN A+ L   G LEK+GVE+IGA  D 
Sbjct: 63   ATYIEPIKWQTVAKIIEKERPDALLPTMGGQTALNCALDLEREGVLEKFGVEMIGANADT 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  F +AMK+IG+  P SGI ++++E  ++  ++G FP IIRP+FT+GGTGGGI
Sbjct: 123  IDKAEDRSRFDKAMKSIGLACPRSGIAHSMEEANAVLEKLG-FPCIIRPSFTMGGTGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEFE IC  GL  S T ++L+++SL+GWKEYE+EV+RD  DN +I+CSIEN DPMG
Sbjct: 182  AYNREEFEEICARGLDLSPTKELLIDESLIGWKEYEMEVVRDKKDNCIIVCSIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ LR+ S+A++REIGVE GGSNVQF + P  G ++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQILRNASLAVLREIGVETGGSNVQFGICPNTGRMVVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT  KTPASFEPSIDYVVTK+PR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGYTLDELSNDITGGKTPASFEPSIDYVVTKLPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGW----GCSNVKEL 502
            FAFEKF  ++  LTTQMKSVGE MA+GRTFQES QKALR LE G  G       SN + +
Sbjct: 362  FAFEKFSKADARLTTQMKSVGEVMAIGRTFQESLQKALRGLEVGVCGLDEKVDLSNPESM 421

Query: 503  DWDWEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLL 562
                  LK  L VP  +R+  +  AM+ GM V++I  ++ ID WFL Q ++LI  E+ + 
Sbjct: 422  SV----LKRELTVPGAERIWYVADAMRAGMSVEDIFGMTMIDPWFLVQMEDLIKDEEKVK 477

Query: 563  TQSVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFE 622
            T  ++++ +D  + +KR+GFSD ++A     TEK +R  R  L + P YKRVDTCAAEF 
Sbjct: 478  TLGLTSIDRDLMFRLKRKGFSDMRLAKLLGVTEKALRAHRHKLEIFPVYKRVDTCAAEFA 537

Query: 623  ANTPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIM 682
             +T Y+YS+Y+ ECE+AP+ + K++ILGGGPNRIGQGIEFDYCC H + +L+  GYETIM
Sbjct: 538  TDTAYLYSTYEEECEAAPSGRDKIMILGGGPNRIGQGIEFDYCCVHAALALRDDGYETIM 597

Query: 683  MNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYL 742
            +N NPETVSTDYDTSDRLYFEP+T+EDVL ++ +E+P+G+IVQ+GGQTPLKL+       
Sbjct: 598  VNCNPETVSTDYDTSDRLYFEPVTLEDVLEIVRVEKPKGVIVQYGGQTPLKLA------- 650

Query: 743  DEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIA 802
               R   A+G   V I GTSPD+ID AEDRERF  +++ L++ QP     +SE +A+  A
Sbjct: 651  ---RALEAAG---VPIIGTSPDAIDRAEDRERFQQMVQRLNLRQPPNATVRSEDEAIRAA 704

Query: 803  KEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVD 862
             +IGYP+VVRPSYVLGGRAMEIVY +E L  YL  AV+V  + PVL+D +L+ AIE+DVD
Sbjct: 705  AKIGYPLVVRPSYVLGGRAMEIVYEEEELKRYLREAVQVSNDSPVLLDHFLNCAIEMDVD 764

Query: 863  ALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCG 922
            A+ D   +VVIG IM+HIEQAGVHSGDSAC +P  ++ +   D +     K+A  L V G
Sbjct: 765  AVCDG-KDVVIGAIMQHIEQAGVHSGDSACSLPPYSLPAHIQDEMREQVKKMALELGVVG 823

Query: 923  LMNCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEV 982
            LMN Q A+    D+Y++E NPRASRTVPFVSK IG  LA  AA VM+GK+L +LGFTKE+
Sbjct: 824  LMNVQLALQGE-DIYVIEVNPRASRTVPFVSKCIGVSLAMIAARVMAGKTLKELGFTKEI 882

Query: 983  IPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSG 1042
            IP   SVKEAV PF KF G D +LGPEM+STGEVMG+  +F  AFAKAQ+ A + LP  G
Sbjct: 883  IPNFYSVKEAVFPFAKFPGVDPILGPEMKSTGEVMGVGDTFGEAFAKAQMGASEVLPTGG 942

Query: 1043 TVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGD 1102
            T F+S+ D  KP +  +A+  +++GF++V+T+GTA  +E  G+ V RV K+ EGRPH  D
Sbjct: 943  TAFISVRDDDKPLVAGVARDLINLGFEVVATAGTAKLIEAAGLKVRRVNKVTEGRPHVVD 1002

Query: 1103 MVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTV 1162
            M+ N ++ +++ T+ G      D   +RR  L +K+   TT++   A  EA++     TV
Sbjct: 1003 MIKNDEVTLIINTTEGRQ-SIADSYSIRRNALQHKIYCTTTIAAGEAICEALKFGPEKTV 1061

Query: 1163 TMTALQDF 1170
                LQD 
Sbjct: 1062 RR--LQDL 1067


>gi|329120046|ref|ZP_08248716.1| carbamoyl-phosphate synthase, large subunit [Neisseria bacilliformis
            ATCC BAA-1200]
 gi|327463577|gb|EGF09895.1| carbamoyl-phosphate synthase, large subunit [Neisseria bacilliformis
            ATCC BAA-1200]
          Length = 1069

 Score = 1259 bits (3258), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 622/1076 (57%), Positives = 799/1076 (74%), Gaps = 22/1076 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTDL+ ILI+GAGPIVIGQACEFDYSG QACKAL+EEGY+VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDLKSILIIGAGPIVIGQACEFDYSGAQACKALREEGYKVILVNSNPATIMTDPEMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  + VE+++ KERPDA+LPTMGGQTALN A+ LA +G L KY VELIGA  DA
Sbjct: 63   VTYIEPIMWQTVEKIIAKERPDAILPTMGGQTALNCALDLARNGVLAKYNVELIGATEDA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  FK+AM+ IG+  P S + +T++E ++   ++G FP +IRP+FT+GG+GGGI
Sbjct: 123  IDKAEDRGRFKEAMEKIGLSCPKSFVCHTMNEALAAQEQVG-FPTLIRPSFTMGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYNK+EF AIC+ G  AS T ++L+E+S+LGWKEYE+EV+RD  DN +IICSIEN DPMG
Sbjct: 182  AYNKDEFLAICERGFDASPTHELLIEQSVLGWKEYEMEVVRDKNDNCIIICSIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGV+ GGSNVQFAVNP +GE++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQIMRNASLAVLREIGVDTGGSNVQFAVNPENGEMIVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VG++LD++ NDIT  +TPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGFTLDELRNDITGGRTPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            FAFEKFP ++  LTTQMKSVGE MA+GRT QESFQKALR LE G  G+   +      D 
Sbjct: 362  FAFEKFPAADDRLTTQMKSVGEVMAMGRTIQESFQKALRGLETGLCGFNPRS-----SDK 416

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
             +++  L  P P+RM  +  A + G  ++EIHE+  ID WFL Q ++L+  EQ +    +
Sbjct: 417  AEIRRELANPGPERMLFVADAFRAGFTLEEIHEICAIDPWFLAQIEDLVKEEQQVSAGCL 476

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
             ++       +KR+GFSDK+IA      EKEVRE R +L + P YKRVDTCAAEF   T 
Sbjct: 477  QDLDFAALRRLKRKGFSDKRIAQLLGVKEKEVREHRYALNLHPVYKRVDTCAAEFATETA 536

Query: 627  YMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSN 686
            Y+YS+Y+ ECE+ P+ +KKV+ILGGGPNRIGQGIEFDYCC H + +L+ +G+ETIM+N N
Sbjct: 537  YLYSTYEEECEARPSDRKKVMILGGGPNRIGQGIEFDYCCVHAALALRESGFETIMVNCN 596

Query: 687  PETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHR 746
            PETVSTD+DTSDRLYFEPLT+EDVL ++  E P G+IV +GGQTPLKL+           
Sbjct: 597  PETVSTDFDTSDRLYFEPLTLEDVLEIVRTENPWGVIVHYGGQTPLKLA----------- 645

Query: 747  LPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEIG 806
              +A  +  V I GTS DSIDAAEDRERF  ++ +L + QP   IA +E +AL  A+EIG
Sbjct: 646  --NALVENGVNIIGTSADSIDAAEDRERFQKVLNDLGLRQPPNRIAHNEEEALVKAEEIG 703

Query: 807  YPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALAD 866
            YP+VVRPSYVLGGRAM++V++ E L  Y+  AV+V  + PVL+D +L++AIE+DVD ++D
Sbjct: 704  YPLVVRPSYVLGGRAMQVVHSAEELQKYMREAVQVSEDSPVLLDFFLNNAIEVDVDCVSD 763

Query: 867  SCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNC 926
               +VVIGGIM+H+EQAG+HSGDS C +P  ++S    D I   T  +A  L V GLMN 
Sbjct: 764  G-QDVVIGGIMQHVEQAGIHSGDSGCSLPPYSLSEEIQDEIRRQTKAMAYALGVVGLMNV 822

Query: 927  QYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPKH 986
            Q+A+   G V++LE NPRASRTVPFVSKA G PLAK  A  M+G SL + G  KEV+P  
Sbjct: 823  QFAV-QDGVVFVLEVNPRASRTVPFVSKATGVPLAKVGARCMAGISLQEQGVEKEVVPDF 881

Query: 987  VSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVFL 1046
             +VKEAV PF KF G D +LGPEMRSTGEVMG+  +F  A+ KAQ+ AG+++P +G +FL
Sbjct: 882  YAVKEAVFPFIKFPGVDTILGPEMRSTGEVMGVGETFGEAYLKAQLGAGERMPATGKIFL 941

Query: 1047 SLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVAN 1106
            S+ +  KP + + A+ F  +G+ + +T GTA +L+  G+ V+ V K+ EGRPH  D + N
Sbjct: 942  SVREEDKPLIVKTAQNFQALGYGVCATRGTAGYLKEHGVVVQAVNKVPEGRPHIVDAIKN 1001

Query: 1107 GQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTV 1162
            G+I ++V T +       D   +RR  L  +VP  TTV+G  A +E +++L S  V
Sbjct: 1002 GEIALVVNTVASSPQSVADSHSIRRSALTQRVPQYTTVAGGEAMSEGVKNLNSTNV 1057


>gi|334129576|ref|ZP_08503380.1| Carbamoyl phosphate synthase large subunit [Methyloversatilis
            universalis FAM5]
 gi|333445261|gb|EGK73203.1| Carbamoyl phosphate synthase large subunit [Methyloversatilis
            universalis FAM5]
          Length = 1071

 Score = 1259 bits (3258), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 634/1087 (58%), Positives = 808/1087 (74%), Gaps = 27/1087 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILI+GAGPIVIGQACEFDYSG QACKAL+EEGY V+L+NSNPATIMTDPG+AD
Sbjct: 3    KRTDIQSILIIGAGPIVIGQACEFDYSGAQACKALREEGYRVVLVNSNPATIMTDPGMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+T ++VE+++EKERPDALLPTMGGQTALN A+ LA  G L+KY VELIGAK +A
Sbjct: 63   VTYIEPITWQMVEKIIEKERPDALLPTMGGQTALNCALDLARHGVLDKYKVELIGAKQEA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR+ FKQAM  IG+ +  SGI ++++E + +   IG FP IIRP+FT+GG+GGGI
Sbjct: 123  IDKAEDREKFKQAMTKIGLGSARSGIAHSMEEALQVQTTIG-FPAIIRPSFTMGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN EEF  ICK GL AS T+++L+E+SLLGWKEYE+EV+RD ADN +I+CSIEN+DPMG
Sbjct: 182  AYNHEEFVEICKRGLEASPTNELLIEESLLGWKEYEMEVVRDSADNCIIVCSIENLDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTD+EYQ +R+ SIA++REIGV+ GGSNVQF++NP DG ++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDREYQIMRNASIAVLREIGVDTGGSNVQFSINPADGRMIVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VG++LD++ NDIT   TPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKIAAKLAVGFTLDELKNDITGGATPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            FAFEKFP +   LTTQMKSVGE MA+GR+FQES QKALR LE G  G+      E++ D 
Sbjct: 362  FAFEKFPQANDRLTTQMKSVGEVMAMGRSFQESMQKALRGLEVGVYGF-----DEVETDQ 416

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
            ++++  L +P P R+  +  A + GM +DE+H+L+ ID WFL Q +++I  E+    +S+
Sbjct: 417  DEMERELALPGPQRIWYVGQAFRNGMSLDEVHQLTKIDPWFLAQIEDIILTERAFFGRSL 476

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
             ++      ++KR+GF+D+++A   +  E  +R  R +LGV P +KRVDTCAAEF  +T 
Sbjct: 477  KSVDAATMRDLKRKGFADRRLAKLFQCDETALRLHRQTLGVRPVFKRVDTCAAEFATDTA 536

Query: 627  YMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSN 686
            YMYSSY+ ECE+ PT  +K+++LGGGPNRIGQGIEFDYCC H + +L+  G+ETIM+N N
Sbjct: 537  YMYSSYEEECEANPTSARKIMVLGGGPNRIGQGIEFDYCCVHAALALREDGFETIMVNCN 596

Query: 687  PETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHR 746
            PETVSTDYDTSDRLYFEPLT+EDVL ++ +E+P G+IVQFGGQTPLKL+          R
Sbjct: 597  PETVSTDYDTSDRLYFEPLTLEDVLEIVAIEKPVGVIVQFGGQTPLKLA----------R 646

Query: 747  LPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEIG 806
               A+G   V I GT+PD IDAAEDRERF  ++ +L ++QP    A++E  A+ +A EIG
Sbjct: 647  DLEANG---VPIIGTTPDMIDAAEDRERFQKLLNDLGLKQPPNRTARAEDQAVRLAAEIG 703

Query: 807  YPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALAD 866
            YP+VVRPSYVLGGRAMEIV+    L  Y+  AV+V  + PVL+D++L+DA E+DVDA +D
Sbjct: 704  YPLVVRPSYVLGGRAMEIVHQQSDLERYMREAVKVSNDSPVLLDRFLNDATEVDVDAFSD 763

Query: 867  SCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNC 926
                V+IGGIMEHIEQAGVHSGDSAC +P  +++    D +   T  +A+ LNV GLMN 
Sbjct: 764  G-QQVIIGGIMEHIEQAGVHSGDSACSLPPFSLTPELCDELRRQTELMARGLNVVGLMNV 822

Query: 927  QYAIT--TSGD-VYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVI 983
            Q+AI    SGD VY+LE NPRASRTVPFVSKA G PLAK AA  M+G+SL D G T E++
Sbjct: 823  QFAIQRDASGDTVYVLEVNPRASRTVPFVSKACGLPLAKIAARCMAGRSLADQGVTGEIV 882

Query: 984  PKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGT 1043
            P + SVKEAV PF KF G D +LGPEM+STGEVMG+  +F  AF K+Q+AAG +LP  G 
Sbjct: 883  PPYYSVKEAVFPFVKFPGVDTILGPEMKSTGEVMGVGRTFGEAFVKSQLAAGVRLPTGGR 942

Query: 1044 VFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDM 1103
             F+S+    K     +A+   ++GF +V+T GTA  +   G+ V  V K++EGRPH  DM
Sbjct: 943  AFISVKPADKAKAIEVARELHELGFTLVATRGTAAAIAAAGLPVTPVNKVNEGRPHIVDM 1002

Query: 1104 VANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTVT 1163
            + N +I  +V T         D   +R   LA +V + TTV GA A    +R  +  T  
Sbjct: 1003 IKNDEITFIVNTVDEKRSAINDSRSIRTSALASRVTLFTTVEGARAACAGMRISQLETY- 1061

Query: 1164 MTALQDF 1170
              ALQD 
Sbjct: 1062 --ALQDL 1066


>gi|398870591|ref|ZP_10625913.1| carbamoyl-phosphate synthase, large subunit [Pseudomonas sp. GM74]
 gi|398207828|gb|EJM94571.1| carbamoyl-phosphate synthase, large subunit [Pseudomonas sp. GM74]
          Length = 1073

 Score = 1259 bits (3258), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 628/1084 (57%), Positives = 799/1084 (73%), Gaps = 20/1084 (1%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILILGAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPAMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  + V +++EKERPDALLPTMGGQTALN A+ L   G LEK+GVE+IGA  D 
Sbjct: 63   ATYIEPIKWQTVAKIIEKERPDALLPTMGGQTALNCALDLEREGVLEKFGVEMIGANADT 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  F +AMK+IG+  P SGI ++++E  ++  ++G FP IIRP+FT+GGTGGGI
Sbjct: 123  IDKAEDRSRFDKAMKSIGLACPRSGIAHSMEEANAVLEKLG-FPCIIRPSFTMGGTGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEFE IC  GL  S T ++L+++SL+GWKEYE+EV+RD  DN +I+CSIEN DPMG
Sbjct: 182  AYNREEFEEICARGLDLSPTKELLIDESLIGWKEYEMEVVRDKKDNCIIVCSIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ LR+ S+A++REIGVE GGSNVQF + P  G ++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQILRNASLAVLREIGVETGGSNVQFGICPNTGRMVVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT  KTPASFEPSIDYVVTK+PR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGYTLDELSNDITGGKTPASFEPSIDYVVTKLPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            FAFEKF  ++  LTTQMKSVGE MA+GRTFQES QKALR LE G  G             
Sbjct: 362  FAFEKFAKADARLTTQMKSVGEVMAIGRTFQESLQKALRGLEVGVCGLDEKVDLANPESM 421

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
              LK  L VP  +R+  +  AM+ GM V++I  ++ ID WFL Q ++LI  E+ + T  +
Sbjct: 422  SVLKRELTVPGAERIWYVADAMRAGMTVEDIFGMTMIDPWFLVQMEDLIKEEEKVKTLGL 481

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
            +++ +D  + +KR+GFSD ++A     TEK +R  R  L + P YKRVDTCAAEF  +T 
Sbjct: 482  TSIDRDLMFRLKRKGFSDMRLAKLLGVTEKSLRAHRHKLEIFPVYKRVDTCAAEFATDTA 541

Query: 627  YMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSN 686
            Y+YS+Y+ ECE+AP+ + K++ILGGGPNRIGQGIEFDYCC H + +L+  GYETIM+N N
Sbjct: 542  YLYSTYEEECEAAPSGRDKIMILGGGPNRIGQGIEFDYCCVHAALALRDDGYETIMVNCN 601

Query: 687  PETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHR 746
            PETVSTDYDTSDRLYFEP+T+EDVL ++ +E+P+G+IVQ+GGQTPLKL+          R
Sbjct: 602  PETVSTDYDTSDRLYFEPVTLEDVLEIVRVEKPKGVIVQYGGQTPLKLA----------R 651

Query: 747  LPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEIG 806
               A+G   V I GTSPD+ID AEDRERF  +++ L++ QP     +SE +A+  A +IG
Sbjct: 652  ALEAAG---VPIIGTSPDAIDRAEDRERFQQMVQRLNLRQPPNATVRSEDEAIRAASKIG 708

Query: 807  YPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALAD 866
            YP+VVRPSYVLGGRAMEIVY +E L  YL  AV+V  + PVL+D +L+ AIE+DVDA+ D
Sbjct: 709  YPLVVRPSYVLGGRAMEIVYEEEELKRYLREAVQVSNDSPVLLDHFLNCAIEMDVDAVCD 768

Query: 867  SCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNC 926
               +VVIG IM+HIEQAGVHSGDSAC +P  ++ +   D +     K+A  L V GLMN 
Sbjct: 769  G-KDVVIGAIMQHIEQAGVHSGDSACSLPPYSLPAHIQDEMREQVKKMALELGVVGLMNV 827

Query: 927  QYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPKH 986
            Q A+    D+Y++E NPRASRTVPFVSK IG  LA  AA VM+GK+L +LGFTKE+IP  
Sbjct: 828  QLALQGE-DIYVIEVNPRASRTVPFVSKCIGVSLAMIAARVMAGKTLKELGFTKEIIPNF 886

Query: 987  VSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVFL 1046
             SVKEAV PF KF G D +LGPEM+STGEVMG+  +F  AFAKAQ+ A + LP  GT F+
Sbjct: 887  YSVKEAVFPFAKFPGVDPILGPEMKSTGEVMGVGDTFGEAFAKAQMGASEVLPTGGTAFI 946

Query: 1047 SLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVAN 1106
            S+ D  KP +  +A+  +++GF++V+T+GTA  +E  G+ V RV K+ EGRPH  DM+ N
Sbjct: 947  SVRDDDKPLVAGVARDLINLGFEVVATAGTAKLIEAAGLKVRRVNKVTEGRPHVVDMIKN 1006

Query: 1107 GQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTVTMTA 1166
             ++ +++ T+ G      D   +RR  L +K+   TT++   A  EA++     TV    
Sbjct: 1007 DEVTLIINTTEGRQ-SIADSYSIRRNALQHKIYCTTTIAAGEAICEALKFGPEKTVRR-- 1063

Query: 1167 LQDF 1170
            LQD 
Sbjct: 1064 LQDL 1067


>gi|359430256|ref|ZP_09221268.1| carbamoyl-phosphate synthase large subunit [Acinetobacter sp. NBRC
            100985]
 gi|358234306|dbj|GAB02807.1| carbamoyl-phosphate synthase large subunit [Acinetobacter sp. NBRC
            100985]
          Length = 1077

 Score = 1259 bits (3258), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 624/1080 (57%), Positives = 795/1080 (73%), Gaps = 36/1080 (3%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILI+GAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIKSILIIGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPSMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+T + V Q++EKERPDA+LPTMGGQTALN A+AL E G LEKY VELIGA  DA
Sbjct: 63   ATYIEPITWQTVAQIIEKERPDAVLPTMGGQTALNCALALDEHGILEKYNVELIGASKDA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I+KAEDR LF  AM+ IG++ P + I  T++E ++I    G FP+IIRP+FT+GG+GGGI
Sbjct: 123  IEKAEDRKLFDIAMRKIGLECPKAAIAETMEEALAIQAGFG-FPVIIRPSFTMGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEF  IC+ G   S T Q+L+++SL+GWKEYE+EV+RD  DN +I+C+IEN DPMG
Sbjct: 182  AYNREEFLEICERGFDLSPTHQLLIDESLIGWKEYEMEVVRDKNDNCIIVCAIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGVE GGSNVQF +NP DG ++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQLMRNASVAVLREIGVETGGSNVQFGINPKDGRMVVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKK-TPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT   TPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKIAAKLAVGYTLDELKNDITGGVTPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGW------GCSNVK 500
            F FEKFP +EP+LTTQMKSVGE MA+GR FQES QKALR LE G  G+      G +N K
Sbjct: 362  FNFEKFPQAEPVLTTQMKSVGEVMAIGRNFQESVQKALRGLEVGVCGFDEKVEAGTANAK 421

Query: 501  ELDWDWEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQF 560
            ++      +   L+VP P+R+  +  A + G  +D++ E + ID+WFL Q +++I  E  
Sbjct: 422  DI------ILKELKVPGPERIWYVADAFRHGFSLDDVFEATKIDRWFLIQIEDIIKTEAQ 475

Query: 561  LLTQSVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAE 620
            +      ++  D+    KR+G SD +IA     ++K+ R++R +LGV P YKRVDTCAAE
Sbjct: 476  VKALGFGDLNADNIRSFKRKGLSDLRIANLMGISQKQFRKQRWNLGVYPVYKRVDTCAAE 535

Query: 621  FEANTPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYET 680
            FE+ T YMYS+YD ECE+ P+ + K++++GGGPNRIGQGIEFDYCC H + +++  GYET
Sbjct: 536  FESGTAYMYSTYDEECEANPSNRDKIMVIGGGPNRIGQGIEFDYCCVHAALAMRDDGYET 595

Query: 681  IMMNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQ 740
            IM+N NPETVSTDYDTSDRLYFEP+T+EDVL ++  E+P+G+IVQ+GGQTPLKL+    +
Sbjct: 596  IMVNCNPETVSTDYDTSDRLYFEPVTLEDVLEIVRTEKPKGVIVQYGGQTPLKLA----R 651

Query: 741  YLDEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALA 800
             L+E   P         I GTSPD+ID AEDRERF  +I+ L + QP   I KS  + ++
Sbjct: 652  ALEEAGTP---------IIGTSPDAIDRAEDRERFQQMIQRLQLRQPNNSIVKSAEEGIS 702

Query: 801  IAKEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEID 860
             A ++GYP+VVRPSYVLGGRAMEIVY +E L  YL  AV+   E PVL+D++L DA E+D
Sbjct: 703  EAAKVGYPLVVRPSYVLGGRAMEIVYNEEELKRYLREAVQASNEAPVLLDRFLDDATEVD 762

Query: 861  VDALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNV 920
            VD ++D   +VVIGGIM+HIEQAG+HSGDSAC IP  ++S    D +   T+ +AK L V
Sbjct: 763  VDCVSDG-KDVVIGGIMQHIEQAGIHSGDSACSIPPYSLSQEVQDEMRRQTVAMAKELGV 821

Query: 921  CGLMNCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTK 980
             GLMN Q+A+    D+Y+LE NPRASRTVPFVSK IG  LAK AA  M+G+SL   GFTK
Sbjct: 822  VGLMNVQFAV-KGNDIYVLEVNPRASRTVPFVSKCIGESLAKVAARCMAGQSLESQGFTK 880

Query: 981  EVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQK--- 1037
            E+IP   +VKEAV PF KF G D +LGPEM+STGEVMG+  +F  AF KA + + ++   
Sbjct: 881  EIIPTRFAVKEAVFPFAKFPGVDPMLGPEMKSTGEVMGVGHTFGEAFYKAVLGSNERLPG 940

Query: 1038 LPLSGTV---FLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMH 1094
            LP  G V   FLS+ +  K ++  IA+  +  GFK+V+T+GT   L+  G+  E V K+ 
Sbjct: 941  LPTEGEVKHAFLSVRESDKKYITDIAQKLIAYGFKLVATNGTYQVLQAAGLECEAVNKVT 1000

Query: 1095 EGRPHAGDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAI 1154
            EGRPH  D + NG+I ++V T+ G    Q D   +RR  L  KV   TT++GA A  +A 
Sbjct: 1001 EGRPHIVDRLKNGEIHLIVNTTEGKQA-QYDSAMIRRAALQGKVYYTTTINGAEAVCQAF 1059


>gi|402701786|ref|ZP_10849765.1| carbamoyl phosphate synthase large subunit [Pseudomonas fragi A22]
          Length = 1073

 Score = 1259 bits (3257), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 628/1088 (57%), Positives = 804/1088 (73%), Gaps = 28/1088 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILILGAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPDMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  + V +++EKERPDALLPTMGGQTALN A+ L   G LEK+GVE+IGA  D 
Sbjct: 63   ATYIEPIKWQTVAKIIEKERPDALLPTMGGQTALNCALDLEREGVLEKFGVEMIGANADT 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  F +AMK+IG+  P SGI ++++E  ++  ++G FP IIRP+FT+GGTGGGI
Sbjct: 123  IDKAEDRSRFDKAMKSIGLDCPRSGIAHSMEEANAVLEKLG-FPCIIRPSFTMGGTGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEFE IC  GL  S T ++L+++SL+GWKEYE+EV+RD  DN +I+CSIEN DPMG
Sbjct: 182  AYNREEFEEICARGLDLSPTKELLIDESLIGWKEYEMEVVRDKKDNCIIVCSIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGVE GGSNVQF + P  G ++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQIMRNASLAVLREIGVETGGSNVQFGICPDTGRMVVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITK-KTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIA++AAKL++GY+LD++ N+IT   TPASFEPSIDYVVTK+PR
Sbjct: 302  PRVSRSSALASKATGFPIARIAAKLAIGYTLDELQNEITGGATPASFEPSIDYVVTKLPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            FAFEKFP ++  LTTQMKSVGE MA+GRTFQES QKALR LE G SG       +LD   
Sbjct: 362  FAFEKFPKADARLTTQMKSVGEVMAIGRTFQESLQKALRGLEVGVSGLD----PKLDLSN 417

Query: 507  EQ----LKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLL 562
             +    LK  L VP  +R+  +  A + GM V++I  ++ ID WFL Q ++LI  E+ + 
Sbjct: 418  PESMAVLKRELTVPGAERIWYVADAFRAGMTVEDIFGMNMIDPWFLVQIEDLIKDEEKIK 477

Query: 563  TQSVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFE 622
            T ++S++ +D  Y +KR+GFSD ++A     TEK +R  R  L V P YKRVDTCAAEF 
Sbjct: 478  TMALSSIDRDAMYRLKRKGFSDARLAVLLGVTEKNLRRHRHKLEVFPVYKRVDTCAAEFA 537

Query: 623  ANTPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIM 682
             +T YMYS+Y+ ECE+ P+ + K++ILGGGPNRIGQGIEFDYCC H + +L++ GYETIM
Sbjct: 538  TDTAYMYSTYEEECEANPSDRDKIMILGGGPNRIGQGIEFDYCCVHAALALRADGYETIM 597

Query: 683  MNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYL 742
            +N NPETVSTDYDTSDRLYFE +T+EDVL ++ +E+P+G+IVQ+GGQTPLKL+    + L
Sbjct: 598  VNCNPETVSTDYDTSDRLYFESVTLEDVLEIVRVEKPKGVIVQYGGQTPLKLA----RAL 653

Query: 743  DEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIA 802
            +E  +P         I GTSPD+ID AEDRERF  +++ L++ QP     +SE +A+  A
Sbjct: 654  EEAGVP---------IIGTSPDAIDRAEDRERFQQMVERLNLRQPPNATVRSEDEAIRAA 704

Query: 803  KEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVD 862
             +IGYP+VVRPSYVLGGRAMEIVY ++ L  YL +AV+V  + PVL+D +L+ AIE+DVD
Sbjct: 705  SKIGYPLVVRPSYVLGGRAMEIVYEEDELKRYLRDAVKVSNDSPVLLDHFLNCAIEMDVD 764

Query: 863  ALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCG 922
            A+ D   +VVIG IM+HIEQAGVHSGDSAC +P  ++     D +     K+A  L V G
Sbjct: 765  AVCDGT-DVVIGAIMQHIEQAGVHSGDSACSLPPYSLPLHIQDEMREQVKKMALELGVVG 823

Query: 923  LMNCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEV 982
            LMN Q A+    D+Y++E NPRASRTVPFVSK IG  LA  AA VM+GK+L ++GFTKE+
Sbjct: 824  LMNVQLALQGE-DIYVIEVNPRASRTVPFVSKCIGVSLAMIAARVMAGKTLKEIGFTKEI 882

Query: 983  IPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSG 1042
            IP   SVKEAV PF KF G D +LGPEM+STGEVMG+  +F  AFAKAQ+ A + LP  G
Sbjct: 883  IPNFYSVKEAVFPFAKFPGVDPILGPEMKSTGEVMGVGDTFGEAFAKAQMGASEVLPTGG 942

Query: 1043 TVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGD 1102
            T F+S+ D  KP +  +A+  + +GF+IVST GTA F+E  G+ V RV K+ EGRPH  D
Sbjct: 943  TAFISVRDDDKPLVAGVARDLISLGFEIVSTVGTAKFIEAAGLKVRRVNKVTEGRPHVVD 1002

Query: 1103 MVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTV 1162
            M+ N ++ +++ T+ G      D   +RR  L +K+   TT++   A  EA++     TV
Sbjct: 1003 MIKNDEVSLIINTTEGRQ-SIADSYSIRRNALQHKIYCTTTIAAGEAICEALKFGPEKTV 1061

Query: 1163 TMTALQDF 1170
               +LQD 
Sbjct: 1062 --RSLQDL 1067


>gi|445496126|ref|ZP_21463170.1| carbamoyl-phosphate synthase large subunit CarB [Janthinobacterium
            sp. HH01]
 gi|444792287|gb|ELX13834.1| carbamoyl-phosphate synthase large subunit CarB [Janthinobacterium
            sp. HH01]
          Length = 1076

 Score = 1259 bits (3257), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 642/1078 (59%), Positives = 811/1078 (75%), Gaps = 28/1078 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILI+GAGPI+IGQACEFDYSG QACKAL+EEGY+VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIKSILIIGAGPIIIGQACEFDYSGAQACKALREEGYKVILVNSNPATIMTDPEMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TY+ P+T ++VE+++ KE+PDA+LPTMGGQTALN A+ L   G L+KY VELIGA  +A
Sbjct: 63   VTYVEPITWQVVERIIAKEKPDAILPTMGGQTALNCALDLHRHGILDKYKVELIGATPEA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  FK AM  IG+ +  SG+ +T++E  ++   +G FP+IIRP+FT+GGTGGGI
Sbjct: 123  IDKAEDRSKFKDAMTKIGLGSAKSGVSHTMEESWAVQRTLG-FPVIIRPSFTMGGTGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEFE ICK GL AS TS++L+E+SL+GWKEYE+EV+RD ADN +IICSIEN+DPMG
Sbjct: 182  AYNEEEFETICKRGLEASPTSELLIEESLIGWKEYEMEVVRDKADNCIIICSIENLDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGV+ GGSNVQF++NP DG ++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQIMRNASLAVLREIGVDTGGSNVQFSINPADGRMIVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITK-KTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VG++LD++ N+IT   TPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGFTLDELRNEITGGATPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            F FEKFP ++  LTTQMKSVGE MA+GRTFQESFQKALR LE G  G     + E   D 
Sbjct: 362  FTFEKFPTADHHLTTQMKSVGEVMAIGRTFQESFQKALRGLEVGVDG-----LNEKTKDR 416

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
            E+++  L  P P+R+  +  A  +G  ++E+H L+ ID WFL Q KE++D+E ++ TQ +
Sbjct: 417  EKIEEELGEPGPERIWYVGDAFAQGFTLEEVHNLTKIDPWFLIQIKEIVDLELWMDTQKL 476

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
              + K   Y++K++GFSD+++AF  ++  K VR KR  L + P YKRVDTCAAEF  NT 
Sbjct: 477  DQIDKPTLYKLKQKGFSDRRLAFLLQTDAKAVRAKRHELNIRPVYKRVDTCAAEFSTNTA 536

Query: 627  YMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSN 686
            YMYS+YD ECES PT KKK+++LGGGPNRIGQGIEFDYCC H + +++  GYETIM+N N
Sbjct: 537  YMYSTYDEECESNPTDKKKIMVLGGGPNRIGQGIEFDYCCVHAALAMREDGYETIMVNCN 596

Query: 687  PETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHR 746
            PETVSTDYDTSDRLYFE LT+EDVL ++DLE+P G+IVQ+GGQTPLKL+L +        
Sbjct: 597  PETVSTDYDTSDRLYFESLTLEDVLEIVDLEKPVGVIVQYGGQTPLKLALDLE------- 649

Query: 747  LPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEIG 806
               A+G   V I GTSPD IDAAEDRERF  ++ +L++ QP    A++EADALA+A+EIG
Sbjct: 650  ---ANG---VPIVGTSPDMIDAAEDRERFQQMLHKLNLRQPPNRTARTEADALALAQEIG 703

Query: 807  YPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALAD 866
            YP+VVRPSYVLGGRAMEIV+    L  Y+  AV+V  + PVL+D++L+DAIE DVD ++D
Sbjct: 704  YPLVVRPSYVLGGRAMEIVHEQRDLERYMREAVKVSHDSPVLLDRFLNDAIECDVDCISD 763

Query: 867  SCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNC 926
                  IGG+MEHIEQAGVHSGDSAC +P  +++   +D +   T  +AK LNV GLMN 
Sbjct: 764  G-ETTFIGGVMEHIEQAGVHSGDSACSLPPYSLAQETIDELKRQTSLMAKGLNVVGLMNV 822

Query: 927  QYAITTS---GD----VYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFT 979
            Q+AI      G+    VY+LE NPRASRTVPFVSKA G  LAK AA  M G++L   G T
Sbjct: 823  QFAIQKQERDGELRDVVYVLEVNPRASRTVPFVSKATGLQLAKIAARCMVGQTLAQQGIT 882

Query: 980  KEVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLP 1039
            KEV+P + SVKEAV PF KF G D +LGPEM+STGEVMG+  +F  AF K+Q+ AG KLP
Sbjct: 883  KEVVPPYFSVKEAVFPFVKFPGVDTILGPEMKSTGEVMGVGKTFGEAFVKSQLGAGIKLP 942

Query: 1040 LSGTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPH 1099
             SG VFLS+    KP   ++A+  +DIGF +V+T GTA  +   GI V  V K+ EGRPH
Sbjct: 943  KSGKVFLSVKSSDKPRAVKVARDLVDIGFTLVATKGTAAVIAAAGIPVTPVNKVVEGRPH 1002

Query: 1100 AGDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSL 1157
              DM+ N +I +++ T         D  ++R   LA +V   TT++GA A  E IR L
Sbjct: 1003 VVDMIKNHEIVLVINTVEEKRSAITDSRQIRTSSLASRVTTYTTIAGAEAAVEGIRHL 1060


>gi|415906145|ref|ZP_11552663.1| Carbamoyl phosphate synthase, large subunit [Herbaspirillum
            frisingense GSF30]
 gi|407763175|gb|EKF71881.1| Carbamoyl phosphate synthase, large subunit [Herbaspirillum
            frisingense GSF30]
          Length = 1077

 Score = 1259 bits (3257), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 640/1081 (59%), Positives = 810/1081 (74%), Gaps = 29/1081 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILI+GAGPI+IGQACEFDYSG QACKAL+EEG++VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIKSILIIGAGPIIIGQACEFDYSGAQACKALREEGFKVILVNSNPATIMTDPEMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+T + VE+++ KE+PDA+LPTMGGQTALN A+ L   G L+KY VELIGA  +A
Sbjct: 63   ATYIEPITWQAVERIIAKEKPDAILPTMGGQTALNCALDLHRHGVLDKYKVELIGATPEA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  FKQAM  IG+ +  SG+ +T++E  ++   IG FP+IIRP+FT+GGTGGGI
Sbjct: 123  IDKAEDRSKFKQAMTKIGLGSARSGVSHTMEESWAVQKTIG-FPVIIRPSFTMGGTGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN EEFE ICK GL AS TS++L+E+SL+GWKEYE+EV+RD ADN +I+CSIEN+DPMG
Sbjct: 182  AYNAEEFETICKRGLEASPTSELLIEESLIGWKEYEMEVVRDKADNCIIVCSIENLDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGV+ GGSNVQF+VNP DG ++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQIMRNASLAVLREIGVDTGGSNVQFSVNPADGRMIVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VG++LD++ N+IT   TPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKIAAKLAVGFTLDELRNEITGGATPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            F FEKFP ++  LTTQMKSVGE MA+GRTFQESFQKALR LE G  G     + E   D 
Sbjct: 362  FTFEKFPQADKHLTTQMKSVGEVMAIGRTFQESFQKALRGLEVGVDG-----MNEKTTDR 416

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQ-S 565
            E ++  L  P PDR+  +  A  +G  ++E+H L+ ID WFL+Q KE++D+E +L  + S
Sbjct: 417  ELIEKELGEPGPDRIWYVGDAFAQGFSLEEVHGLTHIDPWFLSQIKEIVDIELWLEKEAS 476

Query: 566  VSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANT 625
            + ++ K   +++K++GFSD+++A   K+T+  VRE+R  L V P +KRVDTCA EF  +T
Sbjct: 477  LESLDKATLFQLKQKGFSDRRLAKLLKTTDTAVREQRKKLNVRPVFKRVDTCAGEFATDT 536

Query: 626  PYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNS 685
             YMYS+YD ECES PT KKK+++LGGGPNRIGQGIEFDYCC H + +++  GYETIM+N 
Sbjct: 537  AYMYSTYDEECESNPTDKKKIMVLGGGPNRIGQGIEFDYCCVHAALAMRDDGYETIMVNC 596

Query: 686  NPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEH 745
            NPETVSTDYDTSDRLYFEP+T+EDVL ++D E+P G+IVQ+GGQTPLKL+L +       
Sbjct: 597  NPETVSTDYDTSDRLYFEPVTLEDVLEIVDKEKPVGVIVQYGGQTPLKLALDLE------ 650

Query: 746  RLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEI 805
                A+G   V I GTSPD IDAAEDRERF  ++++L + QP    A++EADAL +A+EI
Sbjct: 651  ----ANG---VPIVGTSPDMIDAAEDRERFQKLLQDLGLRQPPNRTARTEADALQLAQEI 703

Query: 806  GYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALA 865
            GYP+VVRPSYVLGGRAMEIV+    L  Y+  AV+V  + PVL+D++L+DAIE+DVD L+
Sbjct: 704  GYPLVVRPSYVLGGRAMEIVHEQRDLERYMREAVKVSHDSPVLLDRFLNDAIEVDVDCLS 763

Query: 866  DSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMN 925
            D      IGG+MEHIEQAGVHSGDSAC +P  ++S   ++ +   T  +AK LNV GLMN
Sbjct: 764  DG-ERTFIGGVMEHIEQAGVHSGDSACSLPPYSLSKDTIEELKRQTALMAKGLNVVGLMN 822

Query: 926  CQYAITTS-------GDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGF 978
             Q+AI  S         V++LE NPRASRTVPFVSKA G  LAK AA  M G+SL+  G 
Sbjct: 823  VQFAIQQSEVDGKTVDTVFVLEVNPRASRTVPFVSKATGLQLAKIAARCMVGQSLDSQGI 882

Query: 979  TKEVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKL 1038
              EV+P + SVKEAV PF KF G D +LGPEM+STGEVMG+  +F  AF K+Q+ AG KL
Sbjct: 883  KNEVVPPYYSVKEAVFPFVKFPGVDTILGPEMKSTGEVMGVGKTFGEAFVKSQMGAGVKL 942

Query: 1039 PLSGTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRP 1098
            P SG VFLS+ +  KP   ++A+  + +GF IV+T GTA  +   GI V  V K+ EGRP
Sbjct: 943  PTSGKVFLSVKNSDKPRAVQVARDLVALGFSIVATKGTAAAISAAGIPVATVNKVVEGRP 1002

Query: 1099 HAGDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLK 1158
            H  DMV N +I ++V T         D   +R   LA +V   TT++GA A  E +R L+
Sbjct: 1003 HIVDMVKNNEIALVVNTVEEKRNAIADSGAIRTSALAARVTTFTTIAGAEAAVEGMRHLE 1062

Query: 1159 S 1159
            S
Sbjct: 1063 S 1063


>gi|84368336|dbj|BAE69494.1| carbamoyl-phosphate synthase large chain [Xanthomonas oryzae pv.
            oryzae MAFF 311018]
          Length = 1090

 Score = 1259 bits (3257), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 629/1068 (58%), Positives = 797/1068 (74%), Gaps = 21/1068 (1%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTDL+ ILI+GAGPIVIGQACEFDYSG QACKAL++EGY V+L+NSNPATIMTDP +AD
Sbjct: 13   KRTDLKTILIIGAGPIVIGQACEFDYSGAQACKALRDEGYRVVLVNSNPATIMTDPNMAD 72

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
              YI P+  + VE+++ KE+PDALLPTMGGQTALN A+ LA+ G LEKY VELIGAK +A
Sbjct: 73   AVYIEPINWQTVEKIISKEKPDALLPTMGGQTALNCALDLADHGVLEKYNVELIGAKREA 132

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I+ AEDR+LF+ AM  IG+  P + + +TL+E + I   +G +P IIRP+FTLGG+GGGI
Sbjct: 133  IRMAEDRELFRVAMGEIGLDCPKAAVAHTLEEALEIQTRVG-YPTIIRPSFTLGGSGGGI 191

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EE   I   GL  S T++VLVE+S+LGWKE+E+EV+RD ADN +I+C+IEN+DPMG
Sbjct: 192  AYNREELIEIVGRGLELSPTTEVLVEESVLGWKEFEMEVVRDTADNCIIVCAIENLDPMG 251

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDK YQRLRD SIA++R+IGV+ GGSNVQF ++P  G V+VIEMN
Sbjct: 252  VHTGDSITVAPAQTLTDKVYQRLRDASIAVLRKIGVDTGGSNVQFGISPTTGRVVVIEMN 311

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKK-TPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ N+IT   TPASFEPSIDYVVTKIPR
Sbjct: 312  PRVSRSSALASKATGFPIAKVAAKLAVGYTLDELRNEITGGLTPASFEPSIDYVVTKIPR 371

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVK-ELDWD 505
            FAFEKFP ++  LTTQMKSVGE MA+GRTFQES QKALR LE G  G   + +    + D
Sbjct: 372  FAFEKFPQADARLTTQMKSVGEVMAMGRTFQESLQKALRGLETGKIGLDPTGLDLSSEDD 431

Query: 506  WEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQS 565
               LK  L+ P P+R+  +  A + GM V E++ LSFID WFL Q +ELI  EQ L    
Sbjct: 432  IAALKRELKAPGPERLFYVADAFRAGMTVAEVYALSFIDPWFLDQIEELISHEQQLADDG 491

Query: 566  VSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANT 625
            ++ +       +K  GFSD ++A    S E+ VR  R +L V P YKRVD+CAAEF  +T
Sbjct: 492  MAALDAARLRMLKCAGFSDARLAELIGSNEESVRTLRRALEVRPVYKRVDSCAAEFATST 551

Query: 626  PYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNS 685
             YMYS+Y+ ECE+ PT + K++ILGGGPNRIGQGIEFDYCC H + +L+  G+ETIM+N 
Sbjct: 552  AYMYSTYEDECEALPTDRDKIMILGGGPNRIGQGIEFDYCCVHAALALRDDGFETIMVNC 611

Query: 686  NPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEH 745
            NPETVSTDYDTSDRLYFEPLT+EDVL +++LE+P+G+IVQ+GGQTPLKL+          
Sbjct: 612  NPETVSTDYDTSDRLYFEPLTLEDVLEIVELEKPKGVIVQYGGQTPLKLA---------- 661

Query: 746  RLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEI 805
            R   A+G   V + GTSPDSID AEDRERF  ++  L ++QP   IA++  +AL +A+EI
Sbjct: 662  RALEANG---VPVIGTSPDSIDLAEDRERFQQLVDTLGLKQPPNRIARNAEEALVLAREI 718

Query: 806  GYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALA 865
            GYP+VVRPSYVLGGRAMEIVY +  L  Y+ +AV+V  + PVL+D++L +A+E+DVD +A
Sbjct: 719  GYPLVVRPSYVLGGRAMEIVYGESDLARYVRDAVKVSNDSPVLLDRFLDNAVEVDVDIIA 778

Query: 866  DSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMN 925
            D  GNV+IGG+MEHIE+AGVHSGDS+C +P  ++S      +    + LA+ LNV GLMN
Sbjct: 779  DKDGNVLIGGVMEHIEEAGVHSGDSSCSLPPYSLSPQTQAELRRQVVMLAEGLNVVGLMN 838

Query: 926  CQYAITT--SGD--VYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKE 981
             Q+A+    +GD  VYLLE NPRASRTVPFVSKAIG PLAK AA  M+GK+L + G  KE
Sbjct: 839  TQFAVQVNEAGDDIVYLLEVNPRASRTVPFVSKAIGMPLAKIAARCMAGKTLAEQGAIKE 898

Query: 982  VIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLS 1041
            ++P + SVKEA+ PF KFQG D +LGPEMRSTGEVMG+  SF  AFA+AQ A G K P  
Sbjct: 899  IVPDYYSVKEAIFPFAKFQGVDPILGPEMRSTGEVMGVGRSFSAAFARAQEAGGIKAPPV 958

Query: 1042 GTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAG 1101
            G  F+S+ D  K  +  +A+A ++ GF +V+T GT  +L+  G++ E V K+ EGRPH  
Sbjct: 959  GKAFVSVRDPDKQRVLPVAQALVERGFTLVATRGTGAWLQQNGLSCEIVNKVAEGRPHIV 1018

Query: 1102 DMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALA 1149
            D + NG+I  +V T+ G +    D   +RR  L ++V   TTV+GA A
Sbjct: 1019 DSIKNGEIVYIVNTTEGRAAIS-DSFSIRREALQHRVTYSTTVAGAKA 1065


>gi|398909498|ref|ZP_10654564.1| carbamoyl-phosphate synthase, large subunit [Pseudomonas sp. GM49]
 gi|398187986|gb|EJM75308.1| carbamoyl-phosphate synthase, large subunit [Pseudomonas sp. GM49]
          Length = 1073

 Score = 1259 bits (3257), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 628/1084 (57%), Positives = 799/1084 (73%), Gaps = 20/1084 (1%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILILGAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPAMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  + V +++EKERPDALLPTMGGQTALN A+ L   G LEK+GVE+IGA  D 
Sbjct: 63   ATYIEPIKWQTVAKIIEKERPDALLPTMGGQTALNCALDLEREGVLEKFGVEMIGANADT 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  F +AMK+IG+  P SGI ++++E  ++  ++G FP IIRP+FT+GGTGGGI
Sbjct: 123  IDKAEDRSRFDKAMKSIGLACPRSGIAHSMEEANAVLEKLG-FPCIIRPSFTMGGTGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEFE IC  GL  S T ++L+++SL+GWKEYE+EV+RD  DN +I+CSIEN DPMG
Sbjct: 182  AYNREEFEEICARGLDLSPTKELLIDESLIGWKEYEMEVVRDKKDNCIIVCSIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ LR+ S+A++REIGVE GGSNVQF + P  G ++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQILRNASLAVLREIGVETGGSNVQFGICPNTGRMVVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT  KTPASFEPSIDYVVTK+PR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGYTLDELSNDITGGKTPASFEPSIDYVVTKLPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            FAFEKF  ++  LTTQMKSVGE MA+GRTFQES QKALR LE G  G             
Sbjct: 362  FAFEKFAKADARLTTQMKSVGEVMAIGRTFQESLQKALRGLEVGVCGLDEKVDLANPESM 421

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
              LK  L VP  +R+  +  AM+ GM V++I  ++ ID WFL Q ++LI  E+ + T  +
Sbjct: 422  SVLKRELTVPGAERIWYVADAMRAGMSVEDIFGMTMIDPWFLVQMEDLIKDEEKVKTLGL 481

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
            +++ +D  + +KR+GFSD ++A     TEK +R  R  L + P YKRVDTCAAEF  +T 
Sbjct: 482  TSIDRDLMFRLKRKGFSDMRLAKLLGVTEKSLRAHRHKLEIFPVYKRVDTCAAEFATDTA 541

Query: 627  YMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSN 686
            Y+YS+Y+ ECE+AP+ + K++ILGGGPNRIGQGIEFDYCC H + +L+  GYETIM+N N
Sbjct: 542  YLYSTYEEECEAAPSGRDKIMILGGGPNRIGQGIEFDYCCVHAALALRDDGYETIMVNCN 601

Query: 687  PETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHR 746
            PETVSTDYDTSDRLYFEP+T+EDVL ++ +E+P+G+IVQ+GGQTPLKL+          R
Sbjct: 602  PETVSTDYDTSDRLYFEPVTLEDVLEIVRVEKPKGVIVQYGGQTPLKLA----------R 651

Query: 747  LPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEIG 806
               A+G   V I GTSPD+ID AEDRERF  +++ L++ QP     +SE +A+  A +IG
Sbjct: 652  ALEAAG---VPIIGTSPDAIDRAEDRERFQQMVQRLNLRQPPNATVRSEDEAIRAAAKIG 708

Query: 807  YPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALAD 866
            YP+VVRPSYVLGGRAMEIVY +E L  YL  AV+V  + PVL+D +L+ AIE+DVDA+ D
Sbjct: 709  YPLVVRPSYVLGGRAMEIVYEEEELKRYLREAVQVSNDSPVLLDHFLNCAIEMDVDAVCD 768

Query: 867  SCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNC 926
               +VVIG IM+HIEQAGVHSGDSAC +P  ++ +   D +     K+A  L V GLMN 
Sbjct: 769  G-KDVVIGAIMQHIEQAGVHSGDSACSLPPYSLPAHIQDEMREQVKKMALELGVVGLMNV 827

Query: 927  QYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPKH 986
            Q A+    D+Y++E NPRASRTVPFVSK IG  LA  AA VM+GK+L +LGFTKE+IP  
Sbjct: 828  QLALQGE-DIYVIEVNPRASRTVPFVSKCIGVSLAMIAARVMAGKTLKELGFTKEIIPNF 886

Query: 987  VSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVFL 1046
             SVKEAV PF KF G D +LGPEM+STGEVMG+  +F  AFAKAQ+ A + LP  GT F+
Sbjct: 887  YSVKEAVFPFAKFPGVDPILGPEMKSTGEVMGVGDTFGEAFAKAQMGASEVLPTGGTAFI 946

Query: 1047 SLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVAN 1106
            S+ D  KP +  +A+  +++GF++V+T+GTA  +E  G+ V RV K+ EGRPH  DM+ N
Sbjct: 947  SVRDDDKPLVAGVARDLINLGFEVVATAGTAKLIEAAGLKVRRVNKVTEGRPHVVDMIKN 1006

Query: 1107 GQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTVTMTA 1166
             ++ +++ T+ G      D   +RR  L +K+   TT++   A  EA++     TV    
Sbjct: 1007 DEVTLIINTTEGRQ-SIADSYSIRRNALQHKIYCTTTIAAGEAICEALKFGPEKTVRR-- 1063

Query: 1167 LQDF 1170
            LQD 
Sbjct: 1064 LQDL 1067


>gi|398840287|ref|ZP_10597524.1| carbamoyl-phosphate synthase, large subunit [Pseudomonas sp. GM102]
 gi|398110875|gb|EJM00769.1| carbamoyl-phosphate synthase, large subunit [Pseudomonas sp. GM102]
          Length = 1073

 Score = 1259 bits (3257), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 628/1088 (57%), Positives = 804/1088 (73%), Gaps = 28/1088 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILILGAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPAMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  + V +++EKERPDALLPTMGGQTALN A+ L   G LEK+GVE+IGA  D 
Sbjct: 63   ATYIEPIKWQTVAKIIEKERPDALLPTMGGQTALNCALDLEREGVLEKFGVEMIGANADT 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  F +AMK+IG+  P SGI +++DE  ++   +G FP IIRP+FT+GGTGGGI
Sbjct: 123  IDKAEDRSRFDKAMKSIGLDCPRSGIAHSMDEANAVLERLG-FPCIIRPSFTMGGTGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEFE IC  GL  S T ++L+++SL+GWKEYE+EV+RD  DN +I+CSIEN DPMG
Sbjct: 182  AYNREEFEEICARGLDLSPTKELLIDESLIGWKEYEMEVVRDKKDNCIIVCSIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ LR+ S+A++REIGVE GGSNVQF + P  G ++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQILRNASLAVLREIGVETGGSNVQFGICPNTGRMVVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT  KTPASFEPSIDYVVTK+PR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGYTLDELSNDITGGKTPASFEPSIDYVVTKLPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            FAFEKFP ++  LTTQMKSVGE MA+GRTFQES QKALR LE G  G      ++LD   
Sbjct: 362  FAFEKFPKADARLTTQMKSVGEVMAIGRTFQESLQKALRGLEVGVCGLD----EKLDLSN 417

Query: 507  EQ----LKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLL 562
             +    LK  L VP  +R+  +  A + G+ V++I  ++ ID WFL Q ++LI  E+ + 
Sbjct: 418  PESMSILKRELTVPGAERIWYVADAFRAGLSVEDIFGMNMIDPWFLVQIEDLIKEEEKVK 477

Query: 563  TQSVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFE 622
            T  ++++  D  + +KR+GFSD ++A     TEK +R  R  L + P YKRVDTCAAEF 
Sbjct: 478  TLGLASIDHDLMFRLKRKGFSDMRLAKLLGVTEKALRRHRHKLEIFPVYKRVDTCAAEFA 537

Query: 623  ANTPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIM 682
             +T Y+YS+Y+ ECE+AP+ + K++ILGGGPNRIGQGIEFDYCC H + +L+  GYETIM
Sbjct: 538  TDTAYLYSTYEEECEAAPSGRDKIMILGGGPNRIGQGIEFDYCCVHAALALREDGYETIM 597

Query: 683  MNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYL 742
            +N NPETVSTDYDTSDRLYFEP+T+EDVL ++ +E+P+G+IVQ+GGQTPLKL+    + L
Sbjct: 598  VNCNPETVSTDYDTSDRLYFEPVTLEDVLEIVRVEKPKGVIVQYGGQTPLKLA----RAL 653

Query: 743  DEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIA 802
            +E  +P         I GTSPD+ID AEDRERF  +++ L++ QP     +SE +A+  A
Sbjct: 654  EEAGVP---------IIGTSPDAIDRAEDRERFQQMVERLNLRQPPNATVRSEDEAIRAA 704

Query: 803  KEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVD 862
             +IGYP+VVRPSYVLGGRAMEIVY +E L  YL +AV+V  + PVL+D +L+ AIE+DVD
Sbjct: 705  AKIGYPLVVRPSYVLGGRAMEIVYEEEELKRYLRDAVKVSNDSPVLLDHFLNCAIEMDVD 764

Query: 863  ALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCG 922
            A+ D   +VVIG IM+HIEQAGVHSGDSAC +P  ++ +   D +     K+A  L V G
Sbjct: 765  AVCDGT-DVVIGAIMQHIEQAGVHSGDSACSLPPYSLPAHIQDEMREQVKKMALELGVVG 823

Query: 923  LMNCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEV 982
            LMN Q A+    D+Y++E NPRASRTVPFVSK IG  LA  AA VM+GK+L ++GFTKE+
Sbjct: 824  LMNVQLALQGE-DIYVIEVNPRASRTVPFVSKCIGVSLAMIAARVMAGKTLKEIGFTKEI 882

Query: 983  IPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSG 1042
            IP   SVKEAV PF KF G D +LGPEM+STGEVMG+  +F  AFAKAQ+ A + LP  G
Sbjct: 883  IPNFYSVKEAVFPFAKFPGVDPILGPEMKSTGEVMGVGDTFGEAFAKAQMGASEVLPTGG 942

Query: 1043 TVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGD 1102
            T F+S+ D  KP +  +A+  +++GF++V+T+GTA  +E  G+ V RV K+ EGRPH  D
Sbjct: 943  TAFISVRDDDKPLVAGVARDLINLGFEVVATAGTAKLIEAAGLKVRRVNKVTEGRPHVVD 1002

Query: 1103 MVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTV 1162
            M+ N ++ +++ T+ G      D   +RR  L +K+   TT++   A  EA++     TV
Sbjct: 1003 MIKNDEVTLIINTTEGRQ-SIADSYSIRRNALQHKIYCTTTIAAGEAICEALKFGPEKTV 1061

Query: 1163 TMTALQDF 1170
                LQD 
Sbjct: 1062 RR--LQDL 1067


>gi|418056383|ref|ZP_12694436.1| carbamoyl-phosphate synthase, large subunit [Hyphomicrobium
            denitrificans 1NES1]
 gi|353209602|gb|EHB75005.1| carbamoyl-phosphate synthase, large subunit [Hyphomicrobium
            denitrificans 1NES1]
          Length = 1091

 Score = 1259 bits (3257), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 637/1105 (57%), Positives = 807/1105 (73%), Gaps = 41/1105 (3%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILI+GAGPIVIGQACEFDYSGTQACKAL+EEGY +IL+NSNPATIMTDP LAD
Sbjct: 3    KRTDIKSILIIGAGPIVIGQACEFDYSGTQACKALREEGYRIILVNSNPATIMTDPDLAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+TPE+V +++ KE+PDA+LPTMGGQTALN A+AL + G L++YGVELIGAK DA
Sbjct: 63   ATYIEPITPEVVAKIIAKEKPDAILPTMGGQTALNTALALHKQGVLQRYGVELIGAKADA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR LF++AM+ IG++TP S + ++ +E     + +G  P IIRP+FTLGGTGGGI
Sbjct: 123  IDKAEDRQLFREAMRAIGLETPRSKLAHSREEAAEALDHVG-LPAIIRPSFTLGGTGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEF  I + GL AS T+Q+LVE+S+LGWKE+E+EV+RD ADN +IICSIENVDPMG
Sbjct: 182  AYNREEFFEIAERGLDASPTNQILVEESVLGWKEFEMEVVRDKADNCIIICSIENVDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPA TLTDKEYQ +RD SIA++REIGVE GGSNVQFAVNP DG ++VIEMN
Sbjct: 242  VHTGDSITVAPALTLTDKEYQLMRDASIAVLREIGVETGGSNVQFAVNPADGRLVVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD+I NDIT   TPASFEP+IDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGYTLDEIQNDITGGATPASFEPTIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDW-- 504
            FAFEKFPG++  LTT MKSVGEAMA+GRTF+ES QKALRS+E G +G+    ++ +    
Sbjct: 362  FAFEKFPGADMSLTTSMKSVGEAMAIGRTFRESIQKALRSMETGLTGFDDIQLEGIGQGD 421

Query: 505  DWEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQ 564
            D   ++ ++  P  DR+  +  A + G  ++EIH+ S ID WFL + K ++D E  ++  
Sbjct: 422  DKNVVRAAVSRPTYDRILKVAQAFRLGFPLEEIHQYSKIDPWFLAEIKGIVDTEARVVAH 481

Query: 565  SVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEAN 624
             +   T      +K +GFSD ++A     +E +V   R  LGV P +KR+DTCAAEF + 
Sbjct: 482  GLPK-TAAQLRAIKAQGFSDARLAKLAGMSETDVHRTRRDLGVTPVFKRIDTCAAEFASP 540

Query: 625  TPYMYSSY------DFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGY 678
            T YMYS+Y      D  CE+ P+ K+K++ILGGGPNRIGQGIEFDYCCCH  F+L +AGY
Sbjct: 541  TAYMYSTYETGLSGDPVCEADPSSKEKIVILGGGPNRIGQGIEFDYCCCHACFALTAAGY 600

Query: 679  ETIMMNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLE----RPEGIIVQFGGQTPLKL 734
            ETIM+N NPETVSTDYDTSDRL+FEPLT EDVL +I +E    + +G+IVQFGGQTPLKL
Sbjct: 601  ETIMVNCNPETVSTDYDTSDRLFFEPLTAEDVLEIIRVESGNGKLKGVIVQFGGQTPLKL 660

Query: 735  SLPIHQYLDEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKS 794
            +      L+E  +P         I GTSPD+ID AEDR+RF A+I +L + QPK GIAK+
Sbjct: 661  A----SALEEAGVP---------ILGTSPDAIDLAEDRDRFKALIDKLKLTQPKSGIAKT 707

Query: 795  EADALAIAKEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLE---------NAVEVDPER 845
              +A A+A+ IGYPVV+RPSYVLGGRAMEIV+    +  Y+          + + V  +R
Sbjct: 708  PGEARAVAETIGYPVVIRPSYVLGGRAMEIVHDGAEVDRYVARLSATLDRPSELVVSDKR 767

Query: 846  PVLIDKYLSDAIEIDVDALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLD 905
            P+LID YL+DA+E+DVD L+D   +  + GIMEHIE+AG+HSGDSAC +P  ++SS  + 
Sbjct: 768  PLLIDSYLTDAVEVDVDCLSDG-KDTFVAGIMEHIEEAGIHSGDSACSLPPHSLSSDIIA 826

Query: 906  TISSWTIKLAKRLNVCGLMNCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAA 965
             +     +LA  L V GLMN Q+AI   G V++LE NPRASRTVPFV+K IG P+A  A+
Sbjct: 827  ELERQARELALSLGVIGLMNVQFAI-KDGQVFILEVNPRASRTVPFVAKVIGLPIASIAS 885

Query: 966  LVMSGKSLNDLGFTKEVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPI 1025
             +M+GK L      K V   H++VKEAV PF +F G D +LGPEMRSTGEVMGID  F I
Sbjct: 886  QMMAGKPLASFNLAKPVY-NHIAVKEAVFPFARFVGVDPILGPEMRSTGEVMGIDHDFAI 944

Query: 1026 AFAKAQIAAGQKLPLSGTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGI 1085
            AF K+Q+ AGQKLP  GTVF+S+ +  K  +    +    +GFK+V+T GT  FLE  GI
Sbjct: 945  AFGKSQLGAGQKLPSGGTVFVSVKESDKARIVSPVRELEAMGFKVVATRGTKRFLEANGI 1004

Query: 1086 AVERVLKMHEGRPHAGDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVS 1145
              E + K+ EGRPH  D + NG I ++  T+ G S    D   +RR  L + +P  TT+S
Sbjct: 1005 QCESINKVLEGRPHIVDAIKNGDIHLVFNTTEG-SKALSDSKDIRRTALLHHIPYYTTLS 1063

Query: 1146 GALANAEAIRSLKSNTVTMTALQDF 1170
            GA+A   AIR+L S+T+ +  LQ F
Sbjct: 1064 GAVAVTRAIRALNSDTLQVAPLQAF 1088


>gi|226941819|ref|YP_002796893.1| CarB [Laribacter hongkongensis HLHK9]
 gi|226716746|gb|ACO75884.1| CarB [Laribacter hongkongensis HLHK9]
          Length = 1068

 Score = 1259 bits (3257), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 624/1074 (58%), Positives = 804/1074 (74%), Gaps = 24/1074 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILI+GAGPIVIGQACEFDYSG QACKAL+EEGY+VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIKSILIIGAGPIVIGQACEFDYSGAQACKALREEGYKVILVNSNPATIMTDPNMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+T ++V +++EKERPDA+LPTMGGQTALN A+ LA  G L+++GVELIGA ++A
Sbjct: 63   VTYIEPITWQMVAKIIEKERPDAVLPTMGGQTALNCALDLARHGVLDQFGVELIGASVEA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDRD FK AM+ IG++   S + ++++E ++I  E+G FP IIRP+FT+GG+GGGI
Sbjct: 123  IDKAEDRDKFKLAMQKIGLECSRSKVAHSMEEALTIQAEVG-FPTIIRPSFTMGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEF AIC+ G  AS T ++L+E+S+LGWKEYE+EV+RD  DN +IICSIEN DPMG
Sbjct: 182  AYNREEFLAICERGFEASPTHELLIEESMLGWKEYEMEVVRDRNDNCIIICSIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGV+ GGSNVQFAV P  G ++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQIMRNASLAVLREIGVDTGGSNVQFAVQPDTGRLIVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT   TPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGYTLDELKNDITGGATPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            FAFEKFP +   LTTQMKSVGE MA+GR+ QES QKALR LE G SG+       L    
Sbjct: 362  FAFEKFPQANDRLTTQMKSVGEVMAIGRSIQESMQKALRGLETGLSGF-----DPLTDSL 416

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
            + ++  L  P PDR+  +  A + G+ V+E+  +S ID WFL Q ++L+  EQ L   ++
Sbjct: 417  DTIRAELGAPGPDRILYVADAFRAGLSVEEVQAISAIDPWFLVQIEDLVRDEQALAGLAL 476

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
            S++ +D  +++KR+GFSD+++A     +E +VR +R +L V P YKRVDTCAAEF  +T 
Sbjct: 477  SDLGRDRLWQLKRKGFSDRRLAQLLGVSEDDVRGRRWALDVRPVYKRVDTCAAEFATSTA 536

Query: 627  YMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSN 686
            YMYSSY+ ECE+ P+  +KV++LGGGPNRIGQGIEFDYCC H + +++ +G+ETIM+N N
Sbjct: 537  YMYSSYEEECEARPSGNRKVMVLGGGPNRIGQGIEFDYCCVHAALAMRESGFETIMVNCN 596

Query: 687  PETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHR 746
            PETVSTDYDTSDRLYFEPLT+EDVL V  +E+P G+IVQ+GGQTPLKL+          R
Sbjct: 597  PETVSTDYDTSDRLYFEPLTLEDVLEVCAVEKPWGVIVQYGGQTPLKLA----------R 646

Query: 747  LPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEIG 806
               A+G   V I GT+PD IDAAEDRERF  ++ EL ++QP    A++  +AL +A+EIG
Sbjct: 647  ALEANG---VPIIGTTPDMIDAAEDRERFQKLLNELGLKQPPNRTARAPQEALQLAEEIG 703

Query: 807  YPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALAD 866
            YP+VVRPSYVLGGRAMEIV+    L  Y+  AV+V  + PVL+D++L+DAIE+DVDA++D
Sbjct: 704  YPLVVRPSYVLGGRAMEIVHERADLERYMREAVKVSNDSPVLLDRFLNDAIEVDVDAISD 763

Query: 867  SCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNC 926
               +VVIGGIM+H+EQAGVHSGDSAC +P  ++  +  D I   T+ +A+ LNV GLMN 
Sbjct: 764  GT-DVVIGGIMQHVEQAGVHSGDSACSLPPYSLFPAIQDEIRRQTVAMARALNVVGLMNV 822

Query: 927  QYAITTSGD-VYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPK 985
            Q+A+   GD +Y+LE NPRASRTVPFVSK  G  LAK AA  M+G+SL   G T EVIP 
Sbjct: 823  QFAV--QGDTIYVLEVNPRASRTVPFVSKVTGQSLAKIAARCMAGQSLAGQGVTAEVIPP 880

Query: 986  HVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVF 1045
            +V+VKEAV PF KF G D +LGPEM+STGEVMG+  +F  AF KAQ+ AG +LP  G VF
Sbjct: 881  YVAVKEAVFPFIKFPGVDTILGPEMKSTGEVMGVGRNFAEAFVKAQLGAGDRLPQGGKVF 940

Query: 1046 LSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVA 1105
            +S+ D  K  +  +A+     GF + +T GTA  L   G+ V+ V K+ E RP+  DM+ 
Sbjct: 941  ISVRDADKSGIVDVARELQRAGFGLCATRGTAKVLSEAGVGVQIVNKVTEHRPNIVDMIK 1000

Query: 1106 NGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKS 1159
            NG+I M++ T +       D   +R   L  +VP  TT++GA A A  I + ++
Sbjct: 1001 NGEIAMVINTVAEKRQSITDSQSIRSSALQNRVPQYTTLAGARAVAHGIATTEA 1054


>gi|398929657|ref|ZP_10664092.1| carbamoyl-phosphate synthase, large subunit [Pseudomonas sp. GM48]
 gi|398166726|gb|EJM54818.1| carbamoyl-phosphate synthase, large subunit [Pseudomonas sp. GM48]
          Length = 1073

 Score = 1259 bits (3257), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 628/1084 (57%), Positives = 799/1084 (73%), Gaps = 20/1084 (1%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILILGAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPAMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  + V +++EKERPDALLPTMGGQTALN A+ L   G LEK+GVE+IGA  D 
Sbjct: 63   ATYIEPIKWQTVAKIIEKERPDALLPTMGGQTALNCALDLEREGVLEKFGVEMIGANADT 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  F +AMK+IG+  P SGI ++++E  ++  ++G FP IIRP+FT+GGTGGGI
Sbjct: 123  IDKAEDRSRFDKAMKSIGLACPRSGIAHSMEEANAVLEKLG-FPCIIRPSFTMGGTGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEFE IC  GL  S T ++L+++SL+GWKEYE+EV+RD  DN +I+CSIEN DPMG
Sbjct: 182  AYNREEFEEICARGLDLSPTKELLIDESLIGWKEYEMEVVRDKKDNCIIVCSIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ LR+ S+A++REIGVE GGSNVQF + P  G ++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQILRNASLAVLREIGVETGGSNVQFGICPNTGRMVVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT  KTPASFEPSIDYVVTK+PR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGYTLDELSNDITGGKTPASFEPSIDYVVTKLPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            FAFEKF  ++  LTTQMKSVGE MA+GRTFQES QKALR LE G  G             
Sbjct: 362  FAFEKFSKADARLTTQMKSVGEVMAIGRTFQESLQKALRGLEVGVCGLDEKVDLANPESM 421

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
              LK  L VP  +R+  +  AM+ GM V++I  ++ ID WFL Q ++LI  E+ + T  +
Sbjct: 422  SVLKRELTVPGAERIWYVADAMRAGMSVEDIFGMTMIDPWFLVQMEDLIKDEEKVKTLGL 481

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
            +++ +D  + +KR+GFSD ++A     TEK +R  R  L + P YKRVDTCAAEF  +T 
Sbjct: 482  TSIDRDLMFRLKRKGFSDMRLAKLLGVTEKSLRAHRHKLEIFPVYKRVDTCAAEFATDTA 541

Query: 627  YMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSN 686
            Y+YS+Y+ ECE+AP+ + K++ILGGGPNRIGQGIEFDYCC H + +L+  GYETIM+N N
Sbjct: 542  YLYSTYEEECEAAPSGRDKIMILGGGPNRIGQGIEFDYCCVHAALALRDDGYETIMVNCN 601

Query: 687  PETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHR 746
            PETVSTDYDTSDRLYFEP+T+EDVL ++ +E+P+G+IVQ+GGQTPLKL+          R
Sbjct: 602  PETVSTDYDTSDRLYFEPVTLEDVLEIVRVEKPKGVIVQYGGQTPLKLA----------R 651

Query: 747  LPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEIG 806
               A+G   V I GTSPD+ID AEDRERF  +++ L++ QP     +SE +A+  A +IG
Sbjct: 652  ALEAAG---VPIIGTSPDAIDRAEDRERFQQMVQRLNLRQPPNATVRSEDEAIRAAAKIG 708

Query: 807  YPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALAD 866
            YP+VVRPSYVLGGRAMEIVY +E L  YL  AV+V  + PVL+D +L+ AIE+DVDA+ D
Sbjct: 709  YPLVVRPSYVLGGRAMEIVYEEEELKRYLREAVQVSNDSPVLLDHFLNCAIEMDVDAVCD 768

Query: 867  SCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNC 926
               +VVIG IM+HIEQAGVHSGDSAC +P  ++ +   D +     K+A  L V GLMN 
Sbjct: 769  G-KDVVIGAIMQHIEQAGVHSGDSACSLPPYSLPAHIQDEMREQVKKMALELGVVGLMNV 827

Query: 927  QYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPKH 986
            Q A+    D+Y++E NPRASRTVPFVSK IG  LA  AA VM+GK+L +LGFTKE+IP  
Sbjct: 828  QLALQGE-DIYVIEVNPRASRTVPFVSKCIGVSLAMIAARVMAGKTLKELGFTKEIIPNF 886

Query: 987  VSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVFL 1046
             SVKEAV PF KF G D +LGPEM+STGEVMG+  +F  AFAKAQ+ A + LP  GT F+
Sbjct: 887  YSVKEAVFPFAKFPGVDPILGPEMKSTGEVMGVGDTFGEAFAKAQMGASEVLPTGGTAFI 946

Query: 1047 SLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVAN 1106
            S+ D  KP +  +A+  +++GF++V+T+GTA  +E  G+ V RV K+ EGRPH  DM+ N
Sbjct: 947  SVRDDDKPLVAGVARDLINLGFEVVATAGTAKLIEAAGLKVRRVNKVTEGRPHVVDMIKN 1006

Query: 1107 GQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTVTMTA 1166
             ++ +++ T+ G      D   +RR  L +K+   TT++   A  EA++     TV    
Sbjct: 1007 DEVTLIINTTEGRQ-SIADSYSIRRNALQHKIYCTTTIAAGEAICEALKFGPEKTVRR-- 1063

Query: 1167 LQDF 1170
            LQD 
Sbjct: 1064 LQDL 1067


>gi|332283353|ref|YP_004415264.1| carbamoyl phosphate synthase large subunit [Pusillimonas sp. T7-7]
 gi|330427306|gb|AEC18640.1| carbamoyl phosphate synthase large subunit [Pusillimonas sp. T7-7]
          Length = 1080

 Score = 1259 bits (3257), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 638/1092 (58%), Positives = 816/1092 (74%), Gaps = 30/1092 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KR+D++ ILI+GAGPI+IGQACEFDYSG QACKALK +G+  IL+NSNPATIMTDP  AD
Sbjct: 3    KRSDIKSILIIGAGPIIIGQACEFDYSGAQACKALKADGFRTILVNSNPATIMTDPETAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+T + VE+++E+E+PDALLPTMGGQTALN A+ L  +G LEK+GVELIGA   A
Sbjct: 63   VTYIEPITWQAVEKIIEREKPDALLPTMGGQTALNCALDLVHNGVLEKHGVELIGANEHA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGE------FPLIIRPAFTLG 261
            I+KAEDR  FKQAM  IG+++  SG+ +++DE   +   IG+      FP++IRP+FT+G
Sbjct: 123  IEKAEDRQKFKQAMNDIGLESAKSGVAHSMDEAWEVQRRIGDEAGNSGFPVVIRPSFTMG 182

Query: 262  GTGGGIAYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIE 321
            G+GGGIAYN EEFE+IC+ GL AS T+++L+E+SLLGWKE+E+EV+RD  DN +I+CSIE
Sbjct: 183  GSGGGIAYNSEEFESICRRGLEASPTNELLIEESLLGWKEFEMEVVRDSVDNCIIVCSIE 242

Query: 322  NVDPMGVHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEV 381
            N+DPMGVHTGDSITVAPAQTLTDKEYQ +R+ SIA++REIGV+ GGSNVQFAVNP DG +
Sbjct: 243  NLDPMGVHTGDSITVAPAQTLTDKEYQIMRNASIAVLREIGVDTGGSNVQFAVNPQDGRM 302

Query: 382  MVIEMNPRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITK-KTPASFEPSIDYV 440
            +VIEMNPRVSRSSALASKATGFPIAK+AA+L+VGY+LD++ N+IT   TPASFEP+IDYV
Sbjct: 303  IVIEMNPRVSRSSALASKATGFPIAKVAARLAVGYTLDELKNEITGGATPASFEPAIDYV 362

Query: 441  VTKIPRFAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVK 500
            VTK+PRFAFEKFP ++  LTTQMKSVGE MA+GRTFQESFQKALR LE G  G     + 
Sbjct: 363  VTKVPRFAFEKFPQADSRLTTQMKSVGEVMAIGRTFQESFQKALRGLEVGVDG-----LN 417

Query: 501  ELDWDWEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQF 560
            +   D E+L+  L  P P+R+  +  A  +G  ++E+H L+ ID WFL Q KE++D+E  
Sbjct: 418  QKTTDREKLQIELGEPGPERIWYVGDAFAQGFSLEEVHGLTSIDPWFLAQIKEIVDIELA 477

Query: 561  LLTQSVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAE 620
            L  ++++++  D  +++KRRGFSD+++AF   S+E EVR+ R  LGV P YKRVDTCA E
Sbjct: 478  LEQKTLADLDYDTVWQLKRRGFSDRRLAFLLDSSESEVRKLRHQLGVRPVYKRVDTCAGE 537

Query: 621  FEANTPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYET 680
            F   T YMYS+Y+ ECE+ PT +KK+++LGGGPNRIGQGIEFDYCC H + +L+   YET
Sbjct: 538  FPTRTAYMYSTYEDECEAEPTDRKKIIVLGGGPNRIGQGIEFDYCCVHAALALRDDDYET 597

Query: 681  IMMNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQ 740
            IM+N NPETVSTDYDTSDRLYFEPLT+EDVL ++  E P G+IVQ+GGQTPLKL+     
Sbjct: 598  IMVNCNPETVSTDYDTSDRLYFEPLTLEDVLEIVHKENPVGMIVQYGGQTPLKLA----- 652

Query: 741  YLDEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALA 800
                 R   A+G   V I GTSP+SID AEDRERF  ++ +L + QP    A++E +ALA
Sbjct: 653  -----RALEANG---VPIIGTSPESIDVAEDRERFQKLLNKLGLRQPPNRTARTEGEALA 704

Query: 801  IAKEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEID 860
             A EIGYP+VVRPSYVLGGRAMEIV+  + L  Y+  AV+V  + PVL+D +L++A E+D
Sbjct: 705  HATEIGYPLVVRPSYVLGGRAMEIVHEQQDLERYMREAVKVSNDSPVLLDHFLNNATEVD 764

Query: 861  VDALADSCGNVV-IGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLN 919
            VD +AD  G VV IGG+MEHIEQAGVHSGDSAC +P  ++S   +  I   T  +A+ LN
Sbjct: 765  VDCIAD--GEVVFIGGVMEHIEQAGVHSGDSACSLPPYSLSQEIIAEIKRQTELMARALN 822

Query: 920  VCGLMNCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFT 979
            V GLMN Q+AI   GDVY+LE NPRASRTVP+VSKA G  LAK AA  M+GK+L + G  
Sbjct: 823  VKGLMNVQFAI-QDGDVYVLEVNPRASRTVPYVSKATGLQLAKIAARAMAGKTLAEQGIR 881

Query: 980  KEVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLP 1039
            KEV+P + SVKEAV PF KF G D +LGPEM+STGEVMG+  SF  AF K+Q+AA   LP
Sbjct: 882  KEVVPSYYSVKEAVFPFVKFPGVDTILGPEMKSTGEVMGVGESFGEAFVKSQLAASAWLP 941

Query: 1040 LSGTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPH 1099
             SGTVF+S+    KP    +A+   D+G+KIV+T GTA  +E  G+ V+ V K+ EGRPH
Sbjct: 942  ESGTVFISVRGQDKPRAVEVARGLSDLGYKIVATRGTAAAIEAAGLQVQVVNKVTEGRPH 1001

Query: 1100 AGDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKS 1159
              DM+ NG+I M++ T         D   +R   LA +V   TT++GA A  E ++ L+ 
Sbjct: 1002 IVDMIKNGEIAMVINTVEERRNAIADSRTIRTNSLAARVTFFTTIAGARAAVEGLQYLRQ 1061

Query: 1160 NT-VTMTALQDF 1170
             + + + +LQD 
Sbjct: 1062 GSGLKVYSLQDL 1073



 Score =  241 bits (614), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 148/416 (35%), Positives = 233/416 (56%), Gaps = 23/416 (5%)

Query: 79  ASSKDQKLGKRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPAT 138
           ++ +D+   + TD +KI++LG GP  IGQ  EFDY    A  AL+++ YE I++N NP T
Sbjct: 547 STYEDECEAEPTDRKKIIVLGGGPNRIGQGIEFDYCCVHAALALRDDDYETIMVNCNPET 606

Query: 139 IMTDPGLADRTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGV 198
           + TD   +DR Y  P+T E V +++ KE P  ++   GGQT L LA       ALE  GV
Sbjct: 607 VSTDYDTSDRLYFEPLTLEDVLEIVHKENPVGMIVQYGGQTPLKLA------RALEANGV 660

Query: 199 ELIGAKLDAIKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAF 258
            +IG   ++I  AEDR+ F++ +  +G++ PP+    T  E ++ A EIG +PL++RP++
Sbjct: 661 PIIGTSPESIDVAEDRERFQKLLNKLGLRQPPNRTARTEGEALAHATEIG-YPLVVRPSY 719

Query: 259 TLGGTGGGIAYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIIC 318
            LGG    I + +++ E   +  +  S  S VL++  L    E +++ + D  + V I  
Sbjct: 720 VLGGRAMEIVHEQQDLERYMREAVKVSNDSPVLLDHFLNNATEVDVDCIAD-GEVVFIGG 778

Query: 319 SIENVDPMGVHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVD 378
            +E+++  GVH+GDS    P  +L+ +    ++  +  + R + V+ G  NVQFA+   D
Sbjct: 779 VMEHIEQAGVHSGDSACSLPPYSLSQEIIAEIKRQTELMARALNVK-GLMNVQFAIQ--D 835

Query: 379 GEVMVIEMNPRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSID 438
           G+V V+E+NPR SR+    SKATG  +AK+AA+   G +L +    I K+   S      
Sbjct: 836 GDVYVLEVNPRASRTVPYVSKATGLQLAKIAARAMAGKTLAE--QGIRKEVVPS------ 887

Query: 439 YVVTKIPRFAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGW 494
           Y   K   F F KFPG + +L  +MKS GE M +G +F E+F K+    +   S W
Sbjct: 888 YYSVKEAVFPFVKFPGVDTILGPEMKSTGEVMGVGESFGEAFVKS----QLAASAW 939


>gi|389871623|ref|YP_006379042.1| carbamoyl phosphate synthase large subunit [Advenella kashmirensis
            WT001]
 gi|388536872|gb|AFK62060.1| carbamoyl phosphate synthase large subunit [Advenella kashmirensis
            WT001]
          Length = 1083

 Score = 1259 bits (3257), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 653/1091 (59%), Positives = 819/1091 (75%), Gaps = 28/1091 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILI+GAGPI+IGQACEFDYSG QACKALK EGY  IL+NSNPATIMTDP  AD
Sbjct: 3    KRTDIKSILIIGAGPIIIGQACEFDYSGAQACKALKAEGYRTILVNSNPATIMTDPETAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+T + VE+++E ERPDALLPTMGGQTALN A+ LA +G LEKY V++IGA   A
Sbjct: 63   VTYIEPITWKAVEKIIEVERPDALLPTMGGQTALNCALDLAHNGVLEKYNVQMIGANEQA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGE------FPLIIRPAFTLG 261
            I+KAEDR  FK AM +IG+++  SG+ ++LDE   +   I        FP +IRP+FTLG
Sbjct: 123  IEKAEDRLKFKDAMTSIGLESAKSGVAHSLDEAWEVQKRIAAEAGTSGFPAVIRPSFTLG 182

Query: 262  GTGGGIAYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIE 321
            GTGGGIAYN EEFE IC+ GL AS T+++L+E+SLLGWKEYE+EV+RD ADN +IICSIE
Sbjct: 183  GTGGGIAYNAEEFETICRRGLEASPTNELLIEESLLGWKEYEMEVVRDKADNCIIICSIE 242

Query: 322  NVDPMGVHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEV 381
            N+DPMGVHTGDSITVAPAQTLTDKEYQ +R+ SIA++REIGVE GGSNVQFAVNP +G +
Sbjct: 243  NLDPMGVHTGDSITVAPAQTLTDKEYQIMRNASIAVLREIGVETGGSNVQFAVNPENGRM 302

Query: 382  MVIEMNPRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITK-KTPASFEPSIDYV 440
            +VIEMNPRVSRSSALASKATGFPIAK+AA+L+VGY+LD++ N+IT  +TPASFEP+IDYV
Sbjct: 303  IVIEMNPRVSRSSALASKATGFPIAKVAARLAVGYTLDELQNEITGGQTPASFEPTIDYV 362

Query: 441  VTKIPRFAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVK 500
            VTKIPRFAFEKFP ++  LTTQMKSVGE MA+GRTFQESFQKALR LE G  G    N K
Sbjct: 363  VTKIPRFAFEKFPQADSRLTTQMKSVGEVMAMGRTFQESFQKALRGLEVGVDGL---NQK 419

Query: 501  ELDWDWEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQF 560
             LD   E+L+  L  P P+R+  +  A  +G  +DE+H L+ ID WFL Q KE++D+E  
Sbjct: 420  TLDR--EKLQVELAEPGPERIWYVGDAFAQGFTLDEVHSLTKIDPWFLEQIKEIVDIELE 477

Query: 561  LLTQSVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAE 620
            L  +++S++ +     +KRRGFSD+++AF    +E EVR+ R  LGV P YKRVDTCAAE
Sbjct: 478  LEQKTLSDLNETVMRRLKRRGFSDRRLAFLLDVSESEVRKVRHQLGVRPVYKRVDTCAAE 537

Query: 621  FEANTPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYET 680
            F   T YMYS+Y+ ECES PT KKK+++LGGGPNRIGQGIEFDYCC H + +L+  GYET
Sbjct: 538  FATKTAYMYSTYEEECESHPTDKKKIIVLGGGPNRIGQGIEFDYCCVHAALALREDGYET 597

Query: 681  IMMNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQ 740
            IM+N NPETVSTDYDTSDRLYFEPLT+EDVL ++ LERP G+IVQ+GGQTPLKL+     
Sbjct: 598  IMVNCNPETVSTDYDTSDRLYFEPLTLEDVLEIVHLERPVGMIVQYGGQTPLKLA----- 652

Query: 741  YLDEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALA 800
                 R   A+G   V I GTSP+SID AEDRERF  ++++L + QP    A++EA+A+A
Sbjct: 653  -----RALEANG---VPIIGTSPESIDVAEDRERFQKLLQKLGLRQPPNRTARTEAEAIA 704

Query: 801  IAKEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEID 860
             A EIGYP+VVRPSYVLGGRAMEIV+    L  Y+  AV+V  + PVL+D++L+DA E+D
Sbjct: 705  HAAEIGYPLVVRPSYVLGGRAMEIVHEQTDLERYMREAVKVSNDSPVLLDRFLNDATEVD 764

Query: 861  VDALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNV 920
            VD LAD    V IGG+MEHIEQAGVHSGDSAC +P  ++S+  ++ I   T  +A+ LNV
Sbjct: 765  VDCLADD-EVVFIGGVMEHIEQAGVHSGDSACSLPPYSLSTEVIEEIKRQTSLMARALNV 823

Query: 921  CGLMNCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTK 980
             GLMN Q+AI   G VY+LE NPRASRTVPFVSK  G+ LAK AA  M+GKSL + G T+
Sbjct: 824  RGLMNVQFAI-QDGQVYVLEVNPRASRTVPFVSKVTGYQLAKIAARAMAGKSLAEQGVTE 882

Query: 981  EVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPL 1040
            EV+P + SVKEAV PF KF G D +LGPEM+STGEVMG+  +F  AF K+Q+AAG  LP 
Sbjct: 883  EVVPSYFSVKEAVFPFVKFPGVDTILGPEMKSTGEVMGVGRTFGEAFVKSQLAAGVLLPE 942

Query: 1041 SGTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHA 1100
            +GT FLS+ D  K     +A+  +++GFK+V+T GTA  L   G+  + V K+ EGRPH 
Sbjct: 943  TGTAFLSVKDQDKSKAVELARGLVNLGFKVVATRGTAARLNEAGVEAQVVNKVTEGRPHV 1002

Query: 1101 GDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLK-S 1159
             DM+ NG+IQ+++ T         D   +R + LA +V   TT++GA A  E ++ L+ S
Sbjct: 1003 VDMLKNGEIQLVINTVEERRNAISDSRVIRTQSLADRVTFFTTLAGARAAIEGMQYLRDS 1062

Query: 1160 NTVTMTALQDF 1170
            + + + +LQD 
Sbjct: 1063 DGIQVYSLQDL 1073


>gi|114321130|ref|YP_742813.1| carbamoyl-phosphate synthase large subunit [Alkalilimnicola ehrlichii
            MLHE-1]
 gi|114227524|gb|ABI57323.1| carbamoyl-phosphate synthase large subunit [Alkalilimnicola ehrlichii
            MLHE-1]
          Length = 1078

 Score = 1258 bits (3256), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 632/1090 (57%), Positives = 804/1090 (73%), Gaps = 20/1090 (1%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILI+GAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP  AD
Sbjct: 8    KRTDIKSILIIGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPETAD 67

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
              YI P+  + V ++LEKERPDA+LPTMGGQTALN A+ L+  G LE+ G+E+IGA  +A
Sbjct: 68   AVYIEPIEWQTVARILEKERPDAVLPTMGGQTALNCALDLSREGVLERLGIEMIGANKEA 127

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I  AEDR+ F++AM  IG++T  + I ++++E +     IG FP I+RP+FTLGG+GGGI
Sbjct: 128  IDMAEDRESFREAMARIGLETAHAEIAHSMEEALDAQKRIG-FPTIVRPSFTLGGSGGGI 186

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEF  IC+ GL  S T+++L+E+S+LGWKEYE EV+RD ADN +IIC IEN+DPMG
Sbjct: 187  AYNREEFIEICERGLDLSPTNELLIEESVLGWKEYETEVVRDKADNCIIICFIENLDPMG 246

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ +RD S+A++REIGVE GGSNVQFA+NP DG ++VIEMN
Sbjct: 247  VHTGDSITVAPAQTLTDKEYQIMRDASLAVLREIGVETGGSNVQFAINPADGRMVVIEMN 306

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ N+IT   TPASFEP+IDYVVTKIPR
Sbjct: 307  PRVSRSSALASKATGFPIAKVAAKLAVGYTLDELRNEITGGATPASFEPTIDYVVTKIPR 366

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            F FEKFP + P LTTQMKSVGE MA+GRTFQES QKALR LE   +G        ++   
Sbjct: 367  FTFEKFPKAPPRLTTQMKSVGEVMAIGRTFQESLQKALRGLENDLTGLDERVDLSVEGGN 426

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
            + ++  LR P+P+R+  +    + G  ++E+ EL++ID WFL Q +EL+ VEQ L T  +
Sbjct: 427  DLIRQELRQPSPERLLYLADGFRAGFTLEELFELTWIDPWFLAQIQELVAVEQGLRTGGL 486

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
             ++ +D  + +K++GFSD ++A      E +VR +RL L V P +KRVD+CAAEF + T 
Sbjct: 487  KSLDRDRLFNLKQKGFSDARLARLLGVREADVRARRLQLEVRPVFKRVDSCAAEFASATA 546

Query: 627  YMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSN 686
            YMYS+Y+ ECE+ PT ++K+++LGGGPNRIGQGIEFDYCC H + +++  GYETIM+N N
Sbjct: 547  YMYSTYEEECEAEPTDRRKIMVLGGGPNRIGQGIEFDYCCVHAALAMREDGYETIMVNCN 606

Query: 687  PETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHR 746
            PETVSTDYDTSDRLYFEPLT+EDVL ++++ERPEGIIVQ+GGQTPLKL+          R
Sbjct: 607  PETVSTDYDTSDRLYFEPLTLEDVLAIVEIERPEGIIVQYGGQTPLKLA----------R 656

Query: 747  LPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEIG 806
               A+G     I GT+PDSID AEDRERF  +I +L ++QP    A+S   AL +A EIG
Sbjct: 657  DLEAAG---APIIGTTPDSIDLAEDRERFQGLINKLGLKQPPNRTARSADQALRLAAEIG 713

Query: 807  YPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALAD 866
            YP+VVRPSYVLGGRAM+IVY ++ L+ Y+  AV V  + PVL+D++L DA+E+DVDA+ D
Sbjct: 714  YPLVVRPSYVLGGRAMDIVYGEDELLQYMHEAVRVSNDSPVLLDRFLDDAVEVDVDAICD 773

Query: 867  SCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNC 926
               +V+IGGIMEHIEQAGVHSGDSAC +P  T++    D +   T  LA  L V GLMN 
Sbjct: 774  G-EDVLIGGIMEHIEQAGVHSGDSACSLPPYTLAPDVQDRLREQTRALALELGVVGLMNI 832

Query: 927  QYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPKH 986
            Q+AI  S DVYLLE NPRASRTVP+VSKAIG PLAK AA  M+G++L   G T+EVIP +
Sbjct: 833  QFAIKGS-DVYLLEVNPRASRTVPYVSKAIGTPLAKVAARCMAGQTLAAQGITREVIPAY 891

Query: 987  VSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVFL 1046
             SVKEAV PF KF G D +LGPEM+STGEVMGI  SF  A+AK+Q+AA  KLP SG  F+
Sbjct: 892  YSVKEAVFPFIKFPGVDPILGPEMKSTGEVMGIGRSFGEAYAKSQVAASVKLPRSGRCFI 951

Query: 1047 SLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVAN 1106
            S+ D+ KP    +A+  +  GF +V+T GTA  L   G+  + + K+ EGRPH  D + N
Sbjct: 952  SVRDVDKPGAIEVARELIRRGFSLVATRGTAAALSEAGVECDVINKVLEGRPHIVDAIKN 1011

Query: 1107 GQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTVTMTA 1166
             +I ++V T+ G      D   +RR  L +KV   TT++GA A   A+  L +  V    
Sbjct: 1012 DEIDLIVNTTEGRQA-IADSYSIRREALQHKVCYTTTINGARATLLALDYLDAADVNR-- 1068

Query: 1167 LQDFFDVETA 1176
            LQD     TA
Sbjct: 1069 LQDLHREATA 1078


>gi|398951743|ref|ZP_10674278.1| carbamoyl-phosphate synthase, large subunit [Pseudomonas sp. GM33]
 gi|398156031|gb|EJM44457.1| carbamoyl-phosphate synthase, large subunit [Pseudomonas sp. GM33]
          Length = 1073

 Score = 1258 bits (3256), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 628/1084 (57%), Positives = 799/1084 (73%), Gaps = 20/1084 (1%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILILGAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPAMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  + V +++EKERPDALLPTMGGQTALN A+ L   G LEK+GVE+IGA  D 
Sbjct: 63   ATYIEPIKWQTVAKIIEKERPDALLPTMGGQTALNCALDLEREGVLEKFGVEMIGANADT 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  F +AMK+IG+  P SGI ++++E  ++  ++G FP IIRP+FT+GGTGGGI
Sbjct: 123  IDKAEDRSRFDKAMKSIGLACPRSGIAHSMEEANAVLEKLG-FPCIIRPSFTMGGTGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEFE IC  GL  S T ++L+++SL+GWKEYE+EV+RD  DN +I+CSIEN DPMG
Sbjct: 182  AYNREEFEEICARGLDLSPTKELLIDESLIGWKEYEMEVVRDKKDNCIIVCSIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ LR+ S+A++REIGVE GGSNVQF + P  G ++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQILRNASLAVLREIGVETGGSNVQFGICPNTGRMVVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT  KTPASFEPSIDYVVTK+PR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGYTLDELSNDITGGKTPASFEPSIDYVVTKLPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            FAFEKF  ++  LTTQMKSVGE MA+GRTFQES QKALR LE G  G             
Sbjct: 362  FAFEKFSKADARLTTQMKSVGEVMAIGRTFQESLQKALRGLEVGVCGLDEKVDLANPESM 421

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
              LK  L VP  +R+  +  AM+ GM V++I  ++ ID WFL Q ++LI  E+ + T  +
Sbjct: 422  SVLKRELTVPGAERIWYVADAMRAGMSVEDIFGMTMIDPWFLVQMEDLIKDEEKVKTLGL 481

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
            +++ +D  + +KR+GFSD ++A     TEK +R  R  L + P YKRVDTCAAEF  +T 
Sbjct: 482  TSIDRDLMFRLKRKGFSDMRLAKLLGVTEKALRAHRHKLEIFPVYKRVDTCAAEFATDTA 541

Query: 627  YMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSN 686
            Y+YS+Y+ ECE+AP+ + K++ILGGGPNRIGQGIEFDYCC H + +L+  GYETIM+N N
Sbjct: 542  YLYSTYEEECEAAPSGRDKIMILGGGPNRIGQGIEFDYCCVHAALALRDDGYETIMVNCN 601

Query: 687  PETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHR 746
            PETVSTDYDTSDRLYFEP+T+EDVL ++ +E+P+G+IVQ+GGQTPLKL+          R
Sbjct: 602  PETVSTDYDTSDRLYFEPVTLEDVLEIVRVEKPKGVIVQYGGQTPLKLA----------R 651

Query: 747  LPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEIG 806
               A+G   V I GTSPD+ID AEDRERF  +++ L++ QP     +SE +A+  A +IG
Sbjct: 652  ALEAAG---VPIIGTSPDAIDRAEDRERFQQMVQRLNLRQPPNATVRSEDEAIRAAAKIG 708

Query: 807  YPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALAD 866
            YP+VVRPSYVLGGRAMEIVY +E L  YL  AV+V  + PVL+D +L+ AIE+DVDA+ D
Sbjct: 709  YPLVVRPSYVLGGRAMEIVYEEEELKRYLREAVQVSNDSPVLLDHFLNCAIEMDVDAVCD 768

Query: 867  SCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNC 926
               +VVIG IM+HIEQAGVHSGDSAC +P  ++ +   D +     K+A  L V GLMN 
Sbjct: 769  G-KDVVIGAIMQHIEQAGVHSGDSACSLPPYSLPAHIQDEMREQVKKMALELGVVGLMNV 827

Query: 927  QYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPKH 986
            Q A+    D+Y++E NPRASRTVPFVSK IG  LA  AA VM+GK+L +LGFTKE+IP  
Sbjct: 828  QLALQGE-DIYVIEVNPRASRTVPFVSKCIGVSLAMIAARVMAGKTLKELGFTKEIIPNF 886

Query: 987  VSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVFL 1046
             SVKEAV PF KF G D +LGPEM+STGEVMG+  +F  AFAKAQ+ A + LP  GT F+
Sbjct: 887  YSVKEAVFPFAKFPGVDPILGPEMKSTGEVMGVGDTFGEAFAKAQMGASEVLPTGGTAFI 946

Query: 1047 SLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVAN 1106
            S+ D  KP +  +A+  +++GF++V+T+GTA  +E  G+ V RV K+ EGRPH  DM+ N
Sbjct: 947  SVRDDDKPLVAGVARDLINLGFEVVATAGTAKLIEAAGLKVRRVNKVTEGRPHVVDMIKN 1006

Query: 1107 GQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTVTMTA 1166
             ++ +++ T+ G      D   +RR  L +K+   TT++   A  EA++     TV    
Sbjct: 1007 DEVTLIINTTEGRQ-SIADSYSIRRNALQHKIYCTTTIAAGEAICEALKFGPEKTVRR-- 1063

Query: 1167 LQDF 1170
            LQD 
Sbjct: 1064 LQDL 1067


>gi|440733329|ref|ZP_20913081.1| carbamoyl phosphate synthase large subunit [Xanthomonas translucens
            DAR61454]
 gi|440362918|gb|ELQ00095.1| carbamoyl phosphate synthase large subunit [Xanthomonas translucens
            DAR61454]
          Length = 1080

 Score = 1258 bits (3256), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 628/1071 (58%), Positives = 796/1071 (74%), Gaps = 27/1071 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTDL+ ILI+GAGPIVIGQACEFDYSG QACKAL++EGY V+L+NSNPATIMTDP +AD
Sbjct: 3    KRTDLKTILIIGAGPIVIGQACEFDYSGAQACKALRDEGYRVVLVNSNPATIMTDPNMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
              YI P+  + VE+++ KE+PDALLPTMGGQTALN A+ LA+ G LEKYGVELIGAK +A
Sbjct: 63   AVYIEPINWQTVEKIIAKEKPDALLPTMGGQTALNCALDLADHGVLEKYGVELIGAKREA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I  AEDR+LF+ AM  IG++ P + + +TL+E + I   +G +P IIRP+FTLGG+GGGI
Sbjct: 123  IMMAEDRELFRVAMGEIGLECPKAAVAHTLEEALEIQTRVG-YPTIIRPSFTLGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EE   I   GL  S TS+VLVE+S+LGWKE+E+EV+RD ADN +I+CSIEN+DPMG
Sbjct: 182  AYNREELIEIVGRGLELSPTSEVLVEESVLGWKEFEMEVVRDTADNCIIVCSIENLDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQRLRD SIA++R+IGV+ GGSNVQF +N   G V+VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQRLRDASIAVLRKIGVDTGGSNVQFGINAQTGRVVVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKK-TPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ N+IT   TPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGYTLDELKNEITGGLTPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDW-- 504
            FAFEKFP ++  LTTQMKSVGE MA+GRTF ES QKALR LE G  G   +    LD   
Sbjct: 362  FAFEKFPQADARLTTQMKSVGEVMAMGRTFSESLQKALRGLETGKIGLDPTG---LDLGS 418

Query: 505  --DWEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLL 562
              D   LK  L+ P P+R+  +  A + GM V+++H LSFID WFL Q ++LI  EQ L 
Sbjct: 419  EDDMAALKRELKAPGPERLFYVADAFRAGMSVEQVHALSFIDPWFLDQIEDLIAQEQQLA 478

Query: 563  TQSVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFE 622
               + ++       +KR GFSD ++A    + E  VR  R +  V P YKRVD+CAAEF 
Sbjct: 479  ADGLGSLDAARLRTLKRAGFSDARMAELCGTNEAAVRALRRAHKVRPVYKRVDSCAAEFA 538

Query: 623  ANTPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIM 682
             +T Y+YS+Y+ ECES P+ + K++ILGGGPNRIGQGIEFDYCC H + +L+  GYETIM
Sbjct: 539  TDTAYLYSTYEDECESRPSNRDKIMILGGGPNRIGQGIEFDYCCVHAALALREDGYETIM 598

Query: 683  MNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYL 742
            +N NPETVSTDYDTSDRLYFEPLT+EDVL +++LE+P+G+IVQ+GGQTPLKL+       
Sbjct: 599  VNCNPETVSTDYDTSDRLYFEPLTLEDVLEIVELEQPKGVIVQYGGQTPLKLA------- 651

Query: 743  DEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIA 802
               R   A+G   V + GTSPDSID AEDRERF  ++  L ++QP   IA++  +AL +A
Sbjct: 652  ---RALEANG---VPVIGTSPDSIDLAEDRERFQQLVDTLGLKQPPNRIARNAEEALVLA 705

Query: 803  KEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVD 862
            +EIGYP+VVRPSYVLGGRAMEIVY +  L  Y+ +AV+V  + PVL+D++L +A+E+DVD
Sbjct: 706  REIGYPLVVRPSYVLGGRAMEIVYGESDLARYVRDAVKVSNDSPVLLDRFLDNAVEVDVD 765

Query: 863  ALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCG 922
             +AD  G V+IGG+MEHIE+AGVHSGDS+C +P  ++S+     +    + LAK LNV G
Sbjct: 766  IIADKDGQVLIGGVMEHIEEAGVHSGDSSCSLPPYSLSAKTQAELRRQVVMLAKGLNVVG 825

Query: 923  LMNCQYAITT--SGD--VYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGF 978
            LMN Q+A+    +GD  V+LLE NPRASRTVPFVSKA G  LAK AA  M+GK+L + G 
Sbjct: 826  LMNTQFAVQVDEAGDDIVFLLEVNPRASRTVPFVSKATGMALAKIAARCMAGKTLAEQGA 885

Query: 979  TKEVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKL 1038
             KE++P + SVKEA+ PF KFQG D +LGPEMRSTGEVMG+  SF  AFA+AQ A G K 
Sbjct: 886  LKEIVPDYYSVKEAIFPFAKFQGVDPILGPEMRSTGEVMGVGRSFGAAFARAQEAGGIKA 945

Query: 1039 PLSGTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRP 1098
            P  G  FLS+ D  K  +  +A+A ++ G+ +V+TSGT  +L   G+  +++ K+ EGRP
Sbjct: 946  PPLGKAFLSVRDPDKQRVLPVAQALVERGYTLVATSGTCAWLRQHGLQCDQINKVAEGRP 1005

Query: 1099 HAGDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALA 1149
            H  D++ NG+I  +V T+ G +    D   +RR  L ++V   TTV+GA A
Sbjct: 1006 HIVDLIKNGEIVYIVNTTEGRAAIS-DSFSIRREALQHRVTYSTTVAGARA 1055



 Score =  251 bits (641), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 157/432 (36%), Positives = 239/432 (55%), Gaps = 24/432 (5%)

Query: 60  RVRASSAKIDS-SAELSNGAA----SSKDQKLGKRTDLRKILILGAGPIVIGQACEFDYS 114
           +VR    ++DS +AE +   A    + +D+   + ++  KI+ILG GP  IGQ  EFDY 
Sbjct: 522 KVRPVYKRVDSCAAEFATDTAYLYSTYEDECESRPSNRDKIMILGGGPNRIGQGIEFDYC 581

Query: 115 GTQACKALKEEGYEVILINSNPATIMTDPGLADRTYITPMTPELVEQVLEKERPDALLPT 174
              A  AL+E+GYE I++N NP T+ TD   +DR Y  P+T E V +++E E+P  ++  
Sbjct: 582 CVHAALALREDGYETIMVNCNPETVSTDYDTSDRLYFEPLTLEDVLEIVELEQPKGVIVQ 641

Query: 175 MGGQTALNLAVALAESGALEKYGVELIGAKLDAIKKAEDRDLFKQAMKTIGVKTPPSGIG 234
            GGQT L LA       ALE  GV +IG   D+I  AEDR+ F+Q + T+G+K PP+ I 
Sbjct: 642 YGGQTPLKLA------RALEANGVPVIGTSPDSIDLAEDRERFQQLVDTLGLKQPPNRIA 695

Query: 235 NTLDECISIANEIGEFPLIIRPAFTLGGTGGGIAYNKEEFEAICKAGLAASLTSQVLVEK 294
              +E + +A EIG +PL++RP++ LGG    I Y + +     +  +  S  S VL+++
Sbjct: 696 RNAEEALVLAREIG-YPLVVRPSYVLGGRAMEIVYGESDLARYVRDAVKVSNDSPVLLDR 754

Query: 295 SLLGWKEYELEVMRDLADNVVIICSIENVDPMGVHTGDSITVAPAQTLTDKEYQRLRDYS 354
            L    E +++++ D    V+I   +E+++  GVH+GDS    P  +L+ K    LR   
Sbjct: 755 FLDNAVEVDVDIIADKDGQVLIGGVMEHIEEAGVHSGDSSCSLPPYSLSAKTQAELRRQV 814

Query: 355 IAIIREIGVECGGSNVQFAVN---PVDGEVMVIEMNPRVSRSSALASKATGFPIAKMAAK 411
           + + + + V  G  N QFAV      D  V ++E+NPR SR+    SKATG  +AK+AA+
Sbjct: 815 VMLAKGLNV-VGLMNTQFAVQVDEAGDDIVFLLEVNPRASRTVPFVSKATGMALAKIAAR 873

Query: 412 LSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRFAFEKFPGSEPLLTTQMKSVGEAMA 471
              G +L         +  A  E   DY   K   F F KF G +P+L  +M+S GE M 
Sbjct: 874 CMAGKTL--------AEQGALKEIVPDYYSVKEAIFPFAKFQGVDPILGPEMRSTGEVMG 925

Query: 472 LGRTFQESFQKA 483
           +GR+F  +F +A
Sbjct: 926 VGRSFGAAFARA 937


>gi|358011499|ref|ZP_09143309.1| carbamoyl-phosphate synthase, large subunit [Acinetobacter sp.
            P8-3-8]
          Length = 1077

 Score = 1258 bits (3256), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 628/1082 (58%), Positives = 797/1082 (73%), Gaps = 36/1082 (3%)

Query: 86   LGKRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGL 145
            + KRTD++ ILI+GAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +
Sbjct: 1    MAKRTDIKSILIIGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPAM 60

Query: 146  ADRTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKL 205
            AD TYI P+T + V Q++EKERPDA+LPTMGGQTALN A+AL  +G LEKY VELIGA  
Sbjct: 61   ADATYIEPITWQTVAQIIEKERPDAVLPTMGGQTALNCALALDANGILEKYNVELIGASK 120

Query: 206  DAIKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGG 265
            +AI+KAEDR LF +AM+ IG++ P + I  +++E + I    G FP+IIRP+FT+GG+GG
Sbjct: 121  EAIEKAEDRKLFDEAMRKIGLECPKADIAESMEEALEIQARFG-FPVIIRPSFTMGGSGG 179

Query: 266  GIAYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDP 325
            GIAYNKEEF  IC+ G   S T Q+L+++SL+GWKEYE+EV+RD  DN +I+C+IEN DP
Sbjct: 180  GIAYNKEEFLEICERGFDLSPTKQLLIDESLIGWKEYEMEVVRDKNDNCIIVCAIENFDP 239

Query: 326  MGVHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIE 385
            MGVHTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGVE GGSNVQF + P  G ++VIE
Sbjct: 240  MGVHTGDSITVAPAQTLTDKEYQIMRNASLAVLREIGVETGGSNVQFGICPNTGRMVVIE 299

Query: 386  MNPRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKK-TPASFEPSIDYVVTKI 444
            MNPRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT   TPASFEPSIDYVVTKI
Sbjct: 300  MNPRVSRSSALASKATGFPIAKIAAKLAVGYTLDELKNDITGGVTPASFEPSIDYVVTKI 359

Query: 445  PRFAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGW------GCSN 498
            PRF FEKFP ++  LTTQMKSVGE MA+GR FQES QKALR LE G  G+      G  N
Sbjct: 360  PRFNFEKFPQADSTLTTQMKSVGEVMAIGRNFQESLQKALRGLEVGVCGFDEKIEAGTEN 419

Query: 499  VKELDWDWEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVE 558
            VK+      ++   L+VP P+R+  +  A + G  +D++   + IDKWFL Q +++I  E
Sbjct: 420  VKD------KILVELKVPGPERIWYVADAFRHGFSLDDVFAATNIDKWFLIQIEDIIKTE 473

Query: 559  QFLLTQSVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCA 618
            + + T    ++  D+    KR+G SD +IA     ++K+ R+ R +LGV P YKRVDTCA
Sbjct: 474  EQIKTLGFGDLNADNIRSFKRKGLSDLRIANLMGISQKQFRKHRWNLGVTPVYKRVDTCA 533

Query: 619  AEFEANTPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGY 678
            AEFE++T YMYS+YD ECE+ P+ K K++++GGGPNRIGQGIEFDYCC H + +++  GY
Sbjct: 534  AEFESDTAYMYSTYDEECEANPSGKDKIMVIGGGPNRIGQGIEFDYCCVHAALAMREDGY 593

Query: 679  ETIMMNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPI 738
            ETIM+N NPETVSTDYDTSDRLYFEP+T+EDVL ++  E+P+GIIVQ+GGQTPLKL+   
Sbjct: 594  ETIMVNCNPETVSTDYDTSDRLYFEPITLEDVLEIVRTEKPKGIIVQYGGQTPLKLA--- 650

Query: 739  HQYLDEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADA 798
             + L+E   P         I GTSPD+ID AEDRERF  +I+ L + QP   I KS  + 
Sbjct: 651  -RALEEAGAP---------IIGTSPDAIDRAEDRERFQQMIQRLQLRQPNNSIVKSAEEG 700

Query: 799  LAIAKEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIE 858
            +A A ++GYP+VVRPSYVLGGRAMEIVY D+ L  YL +AV+   E PVL+D++L DAIE
Sbjct: 701  MAEASKVGYPLVVRPSYVLGGRAMEIVYNDDELKRYLRDAVQASNEAPVLLDRFLDDAIE 760

Query: 859  IDVDALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRL 918
            +DVD ++D   +VVIGGIM+HIEQAG+HSGDSAC IP  ++S    D +   TI +AK L
Sbjct: 761  VDVDCVSDG-KDVVIGGIMQHIEQAGIHSGDSACSIPPYSLSDEIQDEMRRQTIAMAKEL 819

Query: 919  NVCGLMNCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGF 978
             V GLMN Q+A+    D+Y+LE NPRASRTVPFVSK IG  LAK AA  M+G+SL   GF
Sbjct: 820  GVVGLMNVQFAVKGE-DIYILEVNPRASRTVPFVSKCIGESLAKVAARCMAGQSLESQGF 878

Query: 979  TKEVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQK- 1037
            TKE+IP + SVKEAV PF KF G D +LGPEM+STGEVMG+  +F  AF KA + A ++ 
Sbjct: 879  TKEIIPTYFSVKEAVFPFNKFPGVDPILGPEMKSTGEVMGVGKTFGEAFYKAVLGANERL 938

Query: 1038 --LPLSGTV---FLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLK 1092
              LP  G V   F+S+ D  KP    IAK  +D GFK+++T GT   ++  GI  ERV K
Sbjct: 939  PGLPTEGEVKHAFISVRDSDKPRAVGIAKQLVDFGFKVIATGGTYDVIKAAGIECERVNK 998

Query: 1093 MHEGRPHAGDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAE 1152
            + EGRP+  D + NG+I +++ T+ G    Q D   +RR  L  KV   TT++GA A  +
Sbjct: 999  VTEGRPNIVDRLKNGEIHLIINTTEGKQA-QEDSFSIRRSALQGKVYNTTTLNGADALCQ 1057

Query: 1153 AI 1154
            A+
Sbjct: 1058 AL 1059


>gi|399521927|ref|ZP_10762592.1| carbamoyl-phosphate synthase large chain [Pseudomonas
            pseudoalcaligenes CECT 5344]
 gi|399109962|emb|CCH39152.1| carbamoyl-phosphate synthase large chain [Pseudomonas
            pseudoalcaligenes CECT 5344]
          Length = 1073

 Score = 1258 bits (3255), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 627/1088 (57%), Positives = 808/1088 (74%), Gaps = 28/1088 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRT+++ ILILGAGPIVIGQACEFDYSG QACKALKEEG+ VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTNIKSILILGAGPIVIGQACEFDYSGAQACKALKEEGFRVILVNSNPATIMTDPSMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+    V +++EKERPDALLPTMGGQTALN A+ L + G LEK+GVE+IGA  D 
Sbjct: 63   ATYIEPIKWATVAKIIEKERPDALLPTMGGQTALNCALDLEKHGILEKFGVEMIGANADT 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  F +AMK+IG+  P SGI + ++E   +  ++G FP IIRP+FT+GGTGGGI
Sbjct: 123  IDKAEDRSRFDKAMKSIGLACPVSGIAHNMEEAYGVLEKVG-FPCIIRPSFTMGGTGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEFE IC  GL  S TS++L+++SL+GWKEYE+EV+RD  DN +I+CSIEN DPMG
Sbjct: 182  AYNREEFEEICARGLDLSPTSELLIDESLIGWKEYEMEVVRDKKDNCIIVCSIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ LR+ S+A++REIGVE GGSNVQF + P  G ++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQILRNASLAVLREIGVETGGSNVQFGICPNTGRMVVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT  +TPASFEP+IDYVVTK+PR
Sbjct: 302  PRVSRSSALASKATGFPIAKIAAKLAVGYTLDELSNDITGGRTPASFEPAIDYVVTKVPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            FAFEKFP ++  LTTQMKSVGE MA+GRTFQES QKALR LE G +G+      +LD + 
Sbjct: 362  FAFEKFPKADARLTTQMKSVGEVMAIGRTFQESMQKALRGLEVGVAGFD----PKLDLND 417

Query: 507  EQLKYSLR----VPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLL 562
             + + +LR    VP+ DR+  +  A + G  V E+ EL+ ID+WFL Q ++LI  E  + 
Sbjct: 418  PEAESTLRRELTVPSADRIWYVADAFRAGKSVAEVFELTRIDEWFLVQIEDLIKDEATVQ 477

Query: 563  TQSVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFE 622
            T  +S + +D  +++KR+GFSD ++A     +EK +R  R  L V+P YKRVDTCAAEF 
Sbjct: 478  TLGLSAIDRDLMFKLKRKGFSDARLAKLLGVSEKSLRAHRHKLKVLPVYKRVDTCAAEFA 537

Query: 623  ANTPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIM 682
             +T YMYS+Y+ ECE+ P+ ++K++ILGGGPNRIGQGIEFDYCC H + +++  GYETIM
Sbjct: 538  TDTAYMYSTYEEECEANPSSREKIMILGGGPNRIGQGIEFDYCCVHAALAMREDGYETIM 597

Query: 683  MNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYL 742
            +N NPETVSTDYDTSDRLYFEP+T+EDVL ++ +E+P+G+IVQ+GGQTPLK    I + L
Sbjct: 598  VNCNPETVSTDYDTSDRLYFEPVTLEDVLEIVRVEQPKGVIVQYGGQTPLK----ICRAL 653

Query: 743  DEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIA 802
            +E  +P         I GTSP++ID AEDRERF  +++ L++ QP    A+SE +ALA++
Sbjct: 654  EEAGVP---------IIGTSPEAIDRAEDRERFQQMVQRLNLRQPANATARSEDEALALS 704

Query: 803  KEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVD 862
            K IGYP+VVRPSYVLGGRAMEIVY +E L  Y+  AV+V  + PVL+D++L+ AIE+DVD
Sbjct: 705  KNIGYPMVVRPSYVLGGRAMEIVYQEEELKRYMREAVKVSNDSPVLLDRFLNCAIEVDVD 764

Query: 863  ALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCG 922
            A+ D    VVIG IM+HIEQAGVHSGDSAC +P  ++     D I     K+A  L V G
Sbjct: 765  AVCDG-ETVVIGAIMQHIEQAGVHSGDSACSLPPYSLPMHIQDEIREQVKKMALELGVVG 823

Query: 923  LMNCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEV 982
            LMN Q A+    D+Y++E NPRASRTVPFVSK +G  LAK AA VM+GKSL + G++KE+
Sbjct: 824  LMNVQMAVQGE-DIYVIEVNPRASRTVPFVSKCVGESLAKVAARVMAGKSLAEAGYSKEI 882

Query: 983  IPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSG 1042
            IP   SVKEAV PF KF G D +LGPEM+STGEVMG+  +F  AFAKAQ+ A + LP SG
Sbjct: 883  IPPFFSVKEAVFPFAKFPGVDPILGPEMKSTGEVMGVGDTFGEAFAKAQLGASEILPNSG 942

Query: 1043 TVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGD 1102
              F+S+ +  KP   ++A+  + +GF++V+T+GTA  +E  G+ V RV K+ EGRPH  D
Sbjct: 943  CAFISVREDDKPEAVQVARDLVALGFEVVATAGTAKVIEAAGLPVRRVNKVTEGRPHVVD 1002

Query: 1103 MVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTV 1162
            M+ N ++ +++ T+ G      D   +RR  L +K+   TT++   A  EA++     TV
Sbjct: 1003 MIKNDEVTLIINTTEGRQ-SIADSYSIRRNALQHKIYCTTTIAAGQAVCEALKFGPEKTV 1061

Query: 1163 TMTALQDF 1170
                LQD 
Sbjct: 1062 RR--LQDL 1067


>gi|340361010|ref|ZP_08683456.1| carbamoyl-phosphate synthase, large subunit [Neisseria macacae ATCC
            33926]
 gi|339889142|gb|EGQ78536.1| carbamoyl-phosphate synthase, large subunit [Neisseria macacae ATCC
            33926]
          Length = 1071

 Score = 1258 bits (3255), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 624/1070 (58%), Positives = 797/1070 (74%), Gaps = 22/1070 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTDL+ ILI+GAGPIVIGQACEFDYSG QACKAL+EEGY+VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDLKSILIIGAGPIVIGQACEFDYSGAQACKALREEGYKVILVNSNPATIMTDPEMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  + VE+++ KERPDA+LPTMGGQTALN A+ LA +G L KY VELIGA  DA
Sbjct: 63   VTYIEPIMWQTVEKIIAKERPDAILPTMGGQTALNCALDLARNGVLAKYNVELIGATEDA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  FK+AM+ IG+  P S + +T++E ++   ++G FP +IRP+FT+GG+GGGI
Sbjct: 123  IDKAEDRGRFKEAMEKIGLSCPKSFVCHTMNEALTAQEQVG-FPTLIRPSFTMGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYNK+EF AIC+ G  AS T ++L+E+S+LGWKEYE+EV+RD ADN +IICSIEN DPMG
Sbjct: 182  AYNKDEFMAICERGFDASPTHELLIEQSVLGWKEYEMEVVRDKADNCIIICSIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGV+ GGSNVQFAVNP +GE++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQIMRNASLAVLREIGVDTGGSNVQFAVNPENGEMIVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VG++LD++ NDIT  +TPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGFTLDELRNDITGGRTPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            FAFEKFP ++  LTTQMKSVGE MA+GRT QESFQKALR LE G  G+   +      D 
Sbjct: 362  FAFEKFPAADDRLTTQMKSVGEVMAMGRTIQESFQKALRGLETGLCGFNPRS-----SDK 416

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
             +++  L  P P+RM  +  A + G  +DEIHE+  ID WFL Q ++L+  EQ +    +
Sbjct: 417  AEIRRELANPGPERMLFVADAFRAGFTLDEIHEICAIDPWFLAQIEDLVKEEQQVSAGCL 476

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
             ++       +KR+GFSDK+IA      EKEVRE R +L + P YKRVDTCAAEF   T 
Sbjct: 477  QDLDFAGLRRLKRKGFSDKRIAQLLGVKEKEVREHRYALKLHPVYKRVDTCAAEFATETA 536

Query: 627  YMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSN 686
            Y+YS+Y+ +CE+ P+ +KKV+ILGGGPNRIGQGIEFDYCC H + +L+ +G+ETIM+N N
Sbjct: 537  YLYSTYEEKCEARPSDRKKVMILGGGPNRIGQGIEFDYCCVHAALALRESGFETIMVNCN 596

Query: 687  PETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHR 746
            PETVSTD+DTSDRLYFEPLT+EDVL ++  E P G+IV +GGQTPLKL+           
Sbjct: 597  PETVSTDFDTSDRLYFEPLTLEDVLEIVRTENPWGVIVHYGGQTPLKLA----------- 645

Query: 747  LPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEIG 806
              +A  +  V I GTS DSIDAAEDRERF  ++ +L + QP   IA +E +AL  A+EIG
Sbjct: 646  --NALVENGVNIIGTSADSIDAAEDRERFQKVLNDLGLRQPPNRIAHNEEEALVKAEEIG 703

Query: 807  YPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALAD 866
            YP+VVRPSYVLGGRAM++V++ E L  Y+  AV+V  + PVL+D +L++AIE+DVD ++D
Sbjct: 704  YPLVVRPSYVLGGRAMQVVHSAEELQKYMREAVQVSEDSPVLLDFFLNNAIEVDVDCVSD 763

Query: 867  SCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNC 926
               +VVIGGIM+H+EQAG+HSGDS C +P  ++S    D I   T  +A  L+V GLMN 
Sbjct: 764  G-KDVVIGGIMQHVEQAGIHSGDSGCSLPPYSLSEEIQDEIRRQTKAMAYALSVVGLMNV 822

Query: 927  QYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPKH 986
            Q+A+   G V++LE NPRASRTVPFVSKA G PLAK  A  M+G SL + G  KEV+P  
Sbjct: 823  QFAV-QDGVVFVLEVNPRASRTVPFVSKATGVPLAKVGARCMAGISLQEQGVEKEVVPDF 881

Query: 987  VSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVFL 1046
             +VKEAV PF KF G D +LGPEMRSTGEVMG+  SF  A+ KAQ+ AG++L  +G +FL
Sbjct: 882  YAVKEAVFPFIKFPGVDTILGPEMRSTGEVMGVGASFGEAYYKAQLGAGERLNPTGKIFL 941

Query: 1047 SLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVAN 1106
            ++ D  KP + + A+ F  +G+ + +T GTA +L+  GI V+ V K+ EGRPH  D + N
Sbjct: 942  AVRDEDKPLIVKTAQNFQALGYGVCATRGTAEYLKEHGIIVQAVNKVQEGRPHIVDAIKN 1001

Query: 1107 GQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRS 1156
            G+I ++V T S  +    D   +RR  L  +VP  TTV+G  A +E  +S
Sbjct: 1002 GEIALVVNTVSSSAQSIADSHSIRRTSLTQRVPQYTTVAGGEAMSEGAKS 1051


>gi|347819402|ref|ZP_08872836.1| carbamoyl-phosphate synthase large subunit [Verminephrobacter
            aporrectodeae subsp. tuberculatae At4]
          Length = 1081

 Score = 1258 bits (3255), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 638/1082 (58%), Positives = 797/1082 (73%), Gaps = 32/1082 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTDL  ILI+GAGPIVIGQACEFDYSG QACKAL+EEGY VILINSNPATIMTDP  AD
Sbjct: 3    KRTDLASILIIGAGPIVIGQACEFDYSGVQACKALREEGYRVILINSNPATIMTDPATAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+T + VE+++ +ERPDA+LPTMGGQTALN A+ L  +G L+KY VELIGA  +A
Sbjct: 63   VTYIEPITWQTVEKIIARERPDAILPTMGGQTALNCALDLWHNGVLDKYRVELIGASPEA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  FK AM  IG+ +  SGI +++ E  ++   +G FP ++RP+FTLGGTGGGI
Sbjct: 123  IDKAEDRLKFKDAMTRIGLGSARSGIAHSMQEAWAVQRSLG-FPTVVRPSFTLGGTGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN EEFE+ICK GL AS TS++L+E+SLLGWKEYE+EV+RD ADN +I+CSIEN+DPMG
Sbjct: 182  AYNPEEFESICKRGLEASPTSELLIEESLLGWKEYEMEVVRDKADNCIIVCSIENLDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGV+ GGSNVQFA+NP DG ++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQIMRNASLAVLREIGVDTGGSNVQFALNPKDGRMVVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKK-TPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AA+L+VGY+LD++ NDIT   TPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAARLAVGYTLDELRNDITGGVTPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            FAFEKFP ++  LTTQMKSVGE MA+GRTFQESFQKALR LE G  G     + E   D 
Sbjct: 362  FAFEKFPTADSRLTTQMKSVGEVMAMGRTFQESFQKALRGLEVGVDG-----MNEKTQDR 416

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
            E L+  L  P P+R+  +  A   G+ VDE++ L++IDKWFL Q +EL+ +E  L   +V
Sbjct: 417  EVLEKELGAPGPERIWYVGDAFAMGLSVDEVYALTWIDKWFLVQIEELVKIELDLDRLAV 476

Query: 567  -------SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAA 619
                   +++  D    +K++GFSD+++A   K+ EK VR  R +L + P YKRVDTCAA
Sbjct: 477  EKGEGALASLDADTLRALKKKGFSDRRLAKLLKTREKAVRAARHALNLRPVYKRVDTCAA 536

Query: 620  EFEANTPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYE 679
            EF   T YMYS+Y+ ECE+AP+  KK+++LGGGPNRIGQGIEFDYCC H + +++  GYE
Sbjct: 537  EFSTRTAYMYSTYEDECEAAPSSNKKIMVLGGGPNRIGQGIEFDYCCVHAALAMREDGYE 596

Query: 680  TIMMNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIH 739
            TIM+N NPETVSTDYD SDRLYFEPLT+ED+L +++ E+P G+IVQ+GGQTPLKL+L + 
Sbjct: 597  TIMVNCNPETVSTDYDMSDRLYFEPLTLEDLLEIVEKEKPTGVIVQYGGQTPLKLALDLE 656

Query: 740  QYLDEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADAL 799
                      A G   V I GTSPD IDAAEDRERF  ++  L + QP    A++EA AL
Sbjct: 657  ----------AEG---VPIIGTSPDMIDAAEDRERFQKLLGALGLRQPPNATARTEAQAL 703

Query: 800  AIAKEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEI 859
              A  +GYP+VVRPSYVLGGRAMEIV+    L  Y+  AV+V  + PVL+D++L+DAIE 
Sbjct: 704  EKAATLGYPLVVRPSYVLGGRAMEIVHEQRDLERYMHEAVQVSHDAPVLLDRFLNDAIEC 763

Query: 860  DVDALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLN 919
            DVD L D+ G   IGG+MEHIEQAGVHSGDSAC +P   +S   +D +   +  LA  LN
Sbjct: 764  DVDCLRDAQGQTFIGGVMEHIEQAGVHSGDSACSLPPYYLSRETVDELKRQSAALAAGLN 823

Query: 920  VCGLMNCQYAITTSGD---VYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDL 976
            V GLMN Q+AI   G    +Y+LE NPRASRTVPFVSKA G PLAK AA  M+G+SL   
Sbjct: 824  VVGLMNVQFAIQEVGGQDLIYVLEVNPRASRTVPFVSKATGIPLAKVAARCMAGQSLASQ 883

Query: 977  GFTKEVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQ 1036
            G T+EV P + SVKEAV PF KF G D +LGPEM+STGEVMG+  +F  AF K+Q+ AG 
Sbjct: 884  GITREVTPPYFSVKEAVFPFVKFPGVDTILGPEMKSTGEVMGVGKTFGEAFVKSQLGAGT 943

Query: 1037 KLPLSGTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEG 1096
            +LP +G VFL++ +  KP    IA+    +GF++V+T GTA  +E  G+AV+ V K+ EG
Sbjct: 944  RLPTAGKVFLTVKNGDKPRAVEIARQLAALGFELVATKGTAAAIEAAGVAVQLVHKVTEG 1003

Query: 1097 RPHAGDMVANGQIQMMVITSSGDSLDQI-DGLKLRRRGLAYKVPVITTVSGALANAEAIR 1155
            RPH  DM+ N +I +MVI +  +  + I D   +R   L  +V   TT+ GA A  E +R
Sbjct: 1004 RPHIVDMIKNDEI-VMVINTVEERRNAIADSRAIRTSSLQARVTTFTTIFGAEAAVEGMR 1062

Query: 1156 SL 1157
             L
Sbjct: 1063 HL 1064


>gi|218781319|ref|YP_002432637.1| carbamoyl-phosphate synthase large subunit [Desulfatibacillum
            alkenivorans AK-01]
 gi|218762703|gb|ACL05169.1| Carbamoyl phosphate synthetase, large subunit [Desulfatibacillum
            alkenivorans AK-01]
          Length = 1075

 Score = 1258 bits (3255), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 642/1091 (58%), Positives = 814/1091 (74%), Gaps = 29/1091 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++KILI+GAGPI+IGQACEFDYSGTQACKALKEEGYEV+L+NSNPATIMTDP  AD
Sbjct: 3    KRTDIKKILIIGAGPIIIGQACEFDYSGTQACKALKEEGYEVVLVNSNPATIMTDPETAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
            RTY+ P+TP+ VE+++ KERPDALLPT+GGQT LN A+ +A+ G LEKYGVE+IGA+++ 
Sbjct: 63   RTYVEPVTPDAVEKIIAKERPDALLPTLGGQTGLNTAIEVAKRGVLEKYGVEMIGARVEV 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I+KAEDR+LF+ AM+ IG+  P S I +TL+E    A +IG FP+IIRP++TLGGTGGGI
Sbjct: 123  IEKAEDRELFRTAMENIGLSVPQSEIVHTLEEARKAAKDIG-FPIIIRPSYTLGGTGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN E+ +   K+GL ASL  QV++E+S+LGWKE+ELEVMRD ADNVVIICSIEN+DPMG
Sbjct: 182  AYNVEDLDVFVKSGLDASLIHQVMLEQSVLGWKEFELEVMRDKADNVVIICSIENMDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDK+YQ +RD ++A++REIGV+ GGSNVQFAVNP +G+++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKQYQIMRDATLAVMREIGVDTGGSNVQFAVNPENGDMIVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRF 447
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD+IPNDITK+T ASFEP++DY V KIPR+
Sbjct: 302  PRVSRSSALASKATGFPIAKIAAKLAVGYTLDEIPNDITKETKASFEPTLDYCVVKIPRW 361

Query: 448  AFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWG-------CSNVK 500
             FEKFP +E LLTT MKSVGE MA+GRTF E+ QK LRSLE G  G+G       C+ V 
Sbjct: 362  TFEKFPETEDLLTTSMKSVGETMAIGRTFTEALQKGLRSLEIGRFGFGADGKDAYCNGVF 421

Query: 501  ELDWDWEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQF 560
                D ++++  L VPN  RM  +  AM+ GM ++EIHEL+ ID WFL     ++++E+ 
Sbjct: 422  P---DPQEMRQRLAVPNSQRMFYLRYAMESGMPLEEIHELTKIDPWFLYHLSTILEMEKK 478

Query: 561  LLTQSVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAE 620
            +    + +M +D   E KR GFSDKQIAF T S E+ VR KR   GV P YK VDTCAAE
Sbjct: 479  IAGAGL-DMDEDALLEAKRFGFSDKQIAFLTGSDEETVRAKRYEKGVRPVYKLVDTCAAE 537

Query: 621  FEANTPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYET 680
            FEA TPY YS+Y+ E E+  + +KKV+ILGGGPNRIGQGIEFDYCC H SF+L+  G E+
Sbjct: 538  FEAATPYYYSTYEEEDEARISDRKKVMILGGGPNRIGQGIEFDYCCVHASFALREEGVES 597

Query: 681  IMMNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQ 740
            IM+NSNPETVSTDYDTSD+LYFEPLT EDVL++ + E+P G+IVQFGGQTPL ++  I++
Sbjct: 598  IMVNSNPETVSTDYDTSDKLYFEPLTAEDVLHIAESEKPAGVIVQFGGQTPLNIATAINK 657

Query: 741  YLDEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALA 800
                           V I GT P+SID AEDRE F  ++K+L + QP+ G A      LA
Sbjct: 658  -------------AGVPIIGTQPESIDRAEDRELFKVMLKKLGLVQPENGTAMDIPGTLA 704

Query: 801  IAKEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEID 860
            IA+EIGYPV+VRPS+VLGGRAM+IVY    L  +   A+      PVLIDK+L +A+E+D
Sbjct: 705  IAEEIGYPVIVRPSFVLGGRAMKIVYDSSALEEFAREAIVASEGHPVLIDKFLENAVEVD 764

Query: 861  VDALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNV 920
            VDA+ D     ++ GIMEHIE+AG+HSGDSAC++P K++S +  + I + T  LAK LNV
Sbjct: 765  VDAVCDG-ETTIVAGIMEHIEEAGIHSGDSACVLPPKSLSENIKNQIRTATQALAKELNV 823

Query: 921  CGLMNCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTK 980
             GLMN QYA+    +++++E NPRASRTVPFVSKA G P AK A  VM G+ L DLG T 
Sbjct: 824  IGLMNIQYAVKDE-ELFVIEVNPRASRTVPFVSKATGVPWAKIATKVMLGRKLADLGITG 882

Query: 981  EVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPL 1040
            EVIP++VSVKEAV PF++F G D LLGPEM+STGEVMG+D +F  AFAKAQ+   Q LP 
Sbjct: 883  EVIPEYVSVKEAVFPFDRFPGVDTLLGPEMKSTGEVMGVDRTFGPAFAKAQLGGRQNLPQ 942

Query: 1041 SGTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEG-RPH 1099
             GT+F S+ D  K  +    +    +G+ I++T GT+ FL   G+  + + K+ EG RPH
Sbjct: 943  EGTIFCSVMDSDKEKILEPMRNLKQLGYTIIATRGTSEFLTSHGVENKMISKVSEGIRPH 1002

Query: 1100 AGDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKS 1159
              D V N +I +++ T  G+   + DG K+RR  L + VP  TTV GALA  E I S+K 
Sbjct: 1003 VVDAVKNQEIHLIINTGVGERSTR-DGYKIRRAALRFGVPYTTTVPGALAMCEGIASMKE 1061

Query: 1160 NTVTMTALQDF 1170
             T+ +  LQ++
Sbjct: 1062 ETLGVCCLQEY 1072


>gi|162319798|ref|YP_451768.2| carbamoyl phosphate synthase large subunit [Xanthomonas oryzae pv.
            oryzae MAFF 311018]
          Length = 1080

 Score = 1258 bits (3255), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 629/1068 (58%), Positives = 797/1068 (74%), Gaps = 21/1068 (1%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTDL+ ILI+GAGPIVIGQACEFDYSG QACKAL++EGY V+L+NSNPATIMTDP +AD
Sbjct: 3    KRTDLKTILIIGAGPIVIGQACEFDYSGAQACKALRDEGYRVVLVNSNPATIMTDPNMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
              YI P+  + VE+++ KE+PDALLPTMGGQTALN A+ LA+ G LEKY VELIGAK +A
Sbjct: 63   AVYIEPINWQTVEKIISKEKPDALLPTMGGQTALNCALDLADHGVLEKYNVELIGAKREA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I+ AEDR+LF+ AM  IG+  P + + +TL+E + I   +G +P IIRP+FTLGG+GGGI
Sbjct: 123  IRMAEDRELFRVAMGEIGLDCPKAAVAHTLEEALEIQTRVG-YPTIIRPSFTLGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EE   I   GL  S T++VLVE+S+LGWKE+E+EV+RD ADN +I+C+IEN+DPMG
Sbjct: 182  AYNREELIEIVGRGLELSPTTEVLVEESVLGWKEFEMEVVRDTADNCIIVCAIENLDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDK YQRLRD SIA++R+IGV+ GGSNVQF ++P  G V+VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKVYQRLRDASIAVLRKIGVDTGGSNVQFGISPTTGRVVVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKK-TPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ N+IT   TPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGYTLDELRNEITGGLTPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVK-ELDWD 505
            FAFEKFP ++  LTTQMKSVGE MA+GRTFQES QKALR LE G  G   + +    + D
Sbjct: 362  FAFEKFPQADARLTTQMKSVGEVMAMGRTFQESLQKALRGLETGKIGLDPTGLDLSSEDD 421

Query: 506  WEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQS 565
               LK  L+ P P+R+  +  A + GM V E++ LSFID WFL Q +ELI  EQ L    
Sbjct: 422  IAALKRELKAPGPERLFYVADAFRAGMTVAEVYALSFIDPWFLDQIEELISHEQQLADDG 481

Query: 566  VSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANT 625
            ++ +       +K  GFSD ++A    S E+ VR  R +L V P YKRVD+CAAEF  +T
Sbjct: 482  MAALDAARLRMLKCAGFSDARLAELIGSNEESVRTLRRALEVRPVYKRVDSCAAEFATST 541

Query: 626  PYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNS 685
             YMYS+Y+ ECE+ PT + K++ILGGGPNRIGQGIEFDYCC H + +L+  G+ETIM+N 
Sbjct: 542  AYMYSTYEDECEALPTDRDKIMILGGGPNRIGQGIEFDYCCVHAALALRDDGFETIMVNC 601

Query: 686  NPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEH 745
            NPETVSTDYDTSDRLYFEPLT+EDVL +++LE+P+G+IVQ+GGQTPLKL+          
Sbjct: 602  NPETVSTDYDTSDRLYFEPLTLEDVLEIVELEKPKGVIVQYGGQTPLKLA---------- 651

Query: 746  RLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEI 805
            R   A+G   V + GTSPDSID AEDRERF  ++  L ++QP   IA++  +AL +A+EI
Sbjct: 652  RALEANG---VPVIGTSPDSIDLAEDRERFQQLVDTLGLKQPPNRIARNAEEALVLAREI 708

Query: 806  GYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALA 865
            GYP+VVRPSYVLGGRAMEIVY +  L  Y+ +AV+V  + PVL+D++L +A+E+DVD +A
Sbjct: 709  GYPLVVRPSYVLGGRAMEIVYGESDLARYVRDAVKVSNDSPVLLDRFLDNAVEVDVDIIA 768

Query: 866  DSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMN 925
            D  GNV+IGG+MEHIE+AGVHSGDS+C +P  ++S      +    + LA+ LNV GLMN
Sbjct: 769  DKDGNVLIGGVMEHIEEAGVHSGDSSCSLPPYSLSPQTQAELRRQVVMLAEGLNVVGLMN 828

Query: 926  CQYAITT--SGD--VYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKE 981
             Q+A+    +GD  VYLLE NPRASRTVPFVSKAIG PLAK AA  M+GK+L + G  KE
Sbjct: 829  TQFAVQVNEAGDDIVYLLEVNPRASRTVPFVSKAIGMPLAKIAARCMAGKTLAEQGAIKE 888

Query: 982  VIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLS 1041
            ++P + SVKEA+ PF KFQG D +LGPEMRSTGEVMG+  SF  AFA+AQ A G K P  
Sbjct: 889  IVPDYYSVKEAIFPFAKFQGVDPILGPEMRSTGEVMGVGRSFSAAFARAQEAGGIKAPPV 948

Query: 1042 GTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAG 1101
            G  F+S+ D  K  +  +A+A ++ GF +V+T GT  +L+  G++ E V K+ EGRPH  
Sbjct: 949  GKAFVSVRDPDKQRVLPVAQALVERGFTLVATRGTGAWLQQNGLSCEIVNKVAEGRPHIV 1008

Query: 1102 DMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALA 1149
            D + NG+I  +V T+ G +    D   +RR  L ++V   TTV+GA A
Sbjct: 1009 DSIKNGEIVYIVNTTEGRAAIS-DSFSIRREALQHRVTYSTTVAGAKA 1055


>gi|152978227|ref|YP_001343856.1| carbamoyl phosphate synthase large subunit [Actinobacillus
            succinogenes 130Z]
 gi|150839950|gb|ABR73921.1| carbamoyl-phosphate synthase, large subunit [Actinobacillus
            succinogenes 130Z]
          Length = 1069

 Score = 1258 bits (3255), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 618/1072 (57%), Positives = 803/1072 (74%), Gaps = 24/1072 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KR D++ ILI+GAGPIVIGQACEFDYSG QACKAL+EEGY+V+L+NSNPATIMTDP +AD
Sbjct: 3    KRNDIKTILIIGAGPIVIGQACEFDYSGAQACKALREEGYKVVLVNSNPATIMTDPDMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  ++VE+++EKERPDA+LPTMGGQTALN A+ L+++G L+KYGVELIGA  DA
Sbjct: 63   VTYIEPIQWQIVEKIIEKERPDAILPTMGGQTALNCALDLSKNGVLKKYGVELIGATEDA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  FK+AM  IG+ TP S + +T DE      ++G FP +IRP+FT+GG+GGGI
Sbjct: 123  IDKAEDRGRFKEAMAKIGLNTPKSFVCHTFDEAWKAQEKVG-FPTLIRPSFTMGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN++EF+AIC+ G  AS T ++L+E+S+LGWKEYE+EV+RD ADN +I+CSIEN DPMG
Sbjct: 182  AYNRDEFQAICERGFDASPTHELLIEQSVLGWKEYEMEVVRDKADNCIIVCSIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGV+ GGSNVQFAVNP +GE++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQIMRNASLAVLREIGVDTGGSNVQFAVNPANGEMIVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKK-TPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+L+++ NDIT    PASFEPSIDYVVTK+PR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGYTLNELRNDITGGLIPASFEPSIDYVVTKVPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            FAFEKFP ++  LTTQMKSVGE MA+GRTFQES QKALR LE G  G+       L  + 
Sbjct: 362  FAFEKFPQADDRLTTQMKSVGEVMAMGRTFQESLQKALRGLETGICGFNL-----LSEEP 416

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
            E+++  L  P P+R+  +  A   G  ++E+H  S ID WFL Q ++L+  E  L  +S 
Sbjct: 417  EKIRTELGNPGPNRILYVADAFGAGFSLEEVHHYSKIDPWFLIQVQDLVLEELALEKRSF 476

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
            + +   +   +KR+GFSDK+IA  T  +E +VR KR  L + P YKRVDTCA EF+++T 
Sbjct: 477  AELDYAELRRLKRKGFSDKRIAQLTNVSEDQVRAKRHELNLHPVYKRVDTCAGEFKSDTA 536

Query: 627  YMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSN 686
            Y+YS+Y+ ECE+ P+ +KKV+ILGGGPNRIGQGIEFDYCC H + +L+ +G+ETIM+N N
Sbjct: 537  YLYSTYEEECEANPSDRKKVMILGGGPNRIGQGIEFDYCCVHAALALRESGFETIMVNCN 596

Query: 687  PETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHR 746
            PETVSTD+DTSDRLYFEPLT+EDVL ++  ERP G+IV +GGQTPLKL+  +H       
Sbjct: 597  PETVSTDFDTSDRLYFEPLTLEDVLEIVHTERPWGVIVHYGGQTPLKLANALH------- 649

Query: 747  LPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEIG 806
                  D  V I GTS DSIDAAEDRERF  I+++L+++QP    A++  +A+ +A E+G
Sbjct: 650  ------DNGVNIIGTSADSIDAAEDRERFQKILQDLNLKQPNNRTARNAQEAVTLADEVG 703

Query: 807  YPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALAD 866
            YP+VVRPSYVLGGRAM+IVY  + L  Y+  AV V  + P+L+D +L++AIE+DVD + D
Sbjct: 704  YPLVVRPSYVLGGRAMQIVYNVDELNKYMREAVSVSNDSPILLDHFLNNAIEVDVDCICD 763

Query: 867  SCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNC 926
               +VV+GGIM+HIEQAG+HSGDSAC +P  ++     D I   T  +A+ LNV GLMN 
Sbjct: 764  GT-DVVMGGIMQHIEQAGIHSGDSACSLPPYSLPKGVQDEIRRQTAAMARALNVVGLMNV 822

Query: 927  QYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPKH 986
            Q+A+     +++LE NPRASRTVPFVSKA G PLAK AA VM+G +L + G T E+IP++
Sbjct: 823  QFAVQNDV-IFVLEVNPRASRTVPFVSKATGRPLAKIAARVMAGINLKEQGITGEIIPQY 881

Query: 987  VSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVFL 1046
             SVKEAV PF KF G D +LGPEMRSTGEVMG+  +F  AF KAQ+ A +++P +G VFL
Sbjct: 882  CSVKEAVFPFIKFPGVDTILGPEMRSTGEVMGVGTTFSEAFLKAQLGANERIPKTGKVFL 941

Query: 1047 SLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVAN 1106
            S++D  K  L  +A+   + G+ + +T GTA FL   G+  + V K+ EGRP+  D + N
Sbjct: 942  SVDDADKERLLPVARTLQEQGYGLCATMGTAKFLRENGVTTQIVNKVREGRPNIVDAIKN 1001

Query: 1107 GQIQMMVITSSGDSLDQI-DGLKLRRRGLAYKVPVITTVSGALANAEAIRSL 1157
            G+I  MVI +SG   + I D   +R   L  +V + TT++ A A AE ++SL
Sbjct: 1002 GEI-AMVINTSGSLPESIADSHSIRHSALQQRVFLQTTMAAAEALAEGVKSL 1052


>gi|424794087|ref|ZP_18220107.1| carbamoyl-phosphate synthase large subunit [Xanthomonas translucens
            pv. graminis ART-Xtg29]
 gi|422796175|gb|EKU24732.1| carbamoyl-phosphate synthase large subunit [Xanthomonas translucens
            pv. graminis ART-Xtg29]
          Length = 1213

 Score = 1258 bits (3255), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 627/1071 (58%), Positives = 797/1071 (74%), Gaps = 27/1071 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTDL+ ILI+GAGPIVIGQACEFDYSG QACKAL++EGY V+L+NSNPATIMTDP +AD
Sbjct: 136  KRTDLKTILIIGAGPIVIGQACEFDYSGAQACKALRDEGYRVVLVNSNPATIMTDPNMAD 195

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
              YI P+  + VE+++ KE+PDALLPTMGGQTALN A+ LA+ G LEKYGVELIGAK +A
Sbjct: 196  AVYIEPINWQTVEKIIAKEKPDALLPTMGGQTALNCALDLADHGVLEKYGVELIGAKREA 255

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I  AEDR+LF+ AM  IG++ P + + +TL+E + I   +G +P IIRP+FTLGG+GGGI
Sbjct: 256  IMMAEDRELFRVAMGEIGLECPKAAVAHTLEEALEIQTRVG-YPTIIRPSFTLGGSGGGI 314

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EE   I   GL  S TS+VLVE+S+LGWKE+E+EV+RD ADN +I+CSIEN+DPMG
Sbjct: 315  AYNREELIEIVGRGLELSPTSEVLVEESVLGWKEFEMEVVRDTADNCIIVCSIENLDPMG 374

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQRLRD SIA++R+IGV+ GGSNVQF +N   G V+VIEMN
Sbjct: 375  VHTGDSITVAPAQTLTDKEYQRLRDASIAVLRKIGVDTGGSNVQFGINAQTGRVVVIEMN 434

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKK-TPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ N+IT   TPASFEPSIDYVVTKIPR
Sbjct: 435  PRVSRSSALASKATGFPIAKVAAKLAVGYTLDELKNEITGGLTPASFEPSIDYVVTKIPR 494

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDW-- 504
            FAFEKFP ++  LTTQMKSVGE MA+GRTF ES QKALR LE G  G   +    LD   
Sbjct: 495  FAFEKFPQADARLTTQMKSVGEVMAMGRTFSESLQKALRGLETGKIGLDPTG---LDLGS 551

Query: 505  --DWEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLL 562
              D   LK  L+ P P+R+  +  A + GM V+++H LSFID WFL Q ++LI  EQ L 
Sbjct: 552  EDDMAALKRELKAPGPERLFYVADAFRAGMSVEQVHALSFIDPWFLDQIEDLIAQEQQLA 611

Query: 563  TQSVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFE 622
               + ++       +KR GFSD ++A    + E  VR  R +  V P YKRVD+CAAEF 
Sbjct: 612  ADGLDSLDAARLRTLKRAGFSDARLAELCGTNEAAVRALRRAHKVRPVYKRVDSCAAEFA 671

Query: 623  ANTPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIM 682
             +T Y+YS+Y+ ECE+ P+ + K++ILGGGPNRIGQGIEFDYCC H + +L+  GYETIM
Sbjct: 672  TDTAYLYSTYEDECEAKPSNRDKIMILGGGPNRIGQGIEFDYCCVHAALALREDGYETIM 731

Query: 683  MNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYL 742
            +N NPETVSTDYDTSDRLYFEPLT+EDVL +++LE+P+G+IVQ+GGQTPLKL+       
Sbjct: 732  VNCNPETVSTDYDTSDRLYFEPLTLEDVLEIVELEQPKGVIVQYGGQTPLKLA------- 784

Query: 743  DEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIA 802
               R   A+G   V + GTSPDSID AEDRERF  ++  L ++QP   IA++  +AL +A
Sbjct: 785  ---RALEANG---VPVIGTSPDSIDLAEDRERFQQLVDTLGLKQPPNRIARNAEEALVLA 838

Query: 803  KEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVD 862
            +EIGYP+VVRPSYVLGGRAMEIVY +  L  Y+ +AV+V  + PVL+D++L +A+E+DVD
Sbjct: 839  REIGYPLVVRPSYVLGGRAMEIVYGESDLARYVRDAVKVSNDSPVLLDRFLDNAVEVDVD 898

Query: 863  ALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCG 922
             +AD  G+V+IGG+MEHIE+AGVHSGDS+C +P  ++S+     +    + LAK LNV G
Sbjct: 899  IIADKDGHVLIGGVMEHIEEAGVHSGDSSCSLPPYSLSAKTQAELRRQVVMLAKGLNVVG 958

Query: 923  LMNCQYAITT--SGD--VYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGF 978
            LMN Q+A+    +GD  V+LLE NPRASRTVPFVSKA G  LAK AA  M+GK+L + G 
Sbjct: 959  LMNTQFAVQVDEAGDDIVFLLEVNPRASRTVPFVSKATGMALAKIAARCMAGKTLGEQGA 1018

Query: 979  TKEVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKL 1038
             KE++P + SVKEA+ PF KFQG D +LGPEMRSTGEVMG+  SF  AFA+AQ A G K 
Sbjct: 1019 LKEIVPDYYSVKEAIFPFAKFQGVDPILGPEMRSTGEVMGVGRSFGAAFARAQEAGGIKA 1078

Query: 1039 PLSGTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRP 1098
            P  G  FLS+ D  K  +  +A+A ++ G+ +V+TSGT  +L   G+  +++ K+ EGRP
Sbjct: 1079 PPLGKAFLSVRDPDKQRVLPVAQALVERGYTLVATSGTCAWLRQHGLQCDQINKVAEGRP 1138

Query: 1099 HAGDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALA 1149
            H  D++ NG+I  +V T+ G +    D   +RR  L ++V   TTV+GA A
Sbjct: 1139 HIVDLIKNGEIVYIVNTTEGRAAIS-DSFSIRREALQHRVTYSTTVAGARA 1188



 Score =  253 bits (645), Expect = 5e-64,   Method: Compositional matrix adjust.
 Identities = 158/432 (36%), Positives = 240/432 (55%), Gaps = 24/432 (5%)

Query: 60   RVRASSAKIDS-SAELSNGAA----SSKDQKLGKRTDLRKILILGAGPIVIGQACEFDYS 114
            +VR    ++DS +AE +   A    + +D+   K ++  KI+ILG GP  IGQ  EFDY 
Sbjct: 655  KVRPVYKRVDSCAAEFATDTAYLYSTYEDECEAKPSNRDKIMILGGGPNRIGQGIEFDYC 714

Query: 115  GTQACKALKEEGYEVILINSNPATIMTDPGLADRTYITPMTPELVEQVLEKERPDALLPT 174
               A  AL+E+GYE I++N NP T+ TD   +DR Y  P+T E V +++E E+P  ++  
Sbjct: 715  CVHAALALREDGYETIMVNCNPETVSTDYDTSDRLYFEPLTLEDVLEIVELEQPKGVIVQ 774

Query: 175  MGGQTALNLAVALAESGALEKYGVELIGAKLDAIKKAEDRDLFKQAMKTIGVKTPPSGIG 234
             GGQT L LA       ALE  GV +IG   D+I  AEDR+ F+Q + T+G+K PP+ I 
Sbjct: 775  YGGQTPLKLA------RALEANGVPVIGTSPDSIDLAEDRERFQQLVDTLGLKQPPNRIA 828

Query: 235  NTLDECISIANEIGEFPLIIRPAFTLGGTGGGIAYNKEEFEAICKAGLAASLTSQVLVEK 294
               +E + +A EIG +PL++RP++ LGG    I Y + +     +  +  S  S VL+++
Sbjct: 829  RNAEEALVLAREIG-YPLVVRPSYVLGGRAMEIVYGESDLARYVRDAVKVSNDSPVLLDR 887

Query: 295  SLLGWKEYELEVMRDLADNVVIICSIENVDPMGVHTGDSITVAPAQTLTDKEYQRLRDYS 354
             L    E +++++ D   +V+I   +E+++  GVH+GDS    P  +L+ K    LR   
Sbjct: 888  FLDNAVEVDVDIIADKDGHVLIGGVMEHIEEAGVHSGDSSCSLPPYSLSAKTQAELRRQV 947

Query: 355  IAIIREIGVECGGSNVQFAVN---PVDGEVMVIEMNPRVSRSSALASKATGFPIAKMAAK 411
            + + + + V  G  N QFAV      D  V ++E+NPR SR+    SKATG  +AK+AA+
Sbjct: 948  VMLAKGLNV-VGLMNTQFAVQVDEAGDDIVFLLEVNPRASRTVPFVSKATGMALAKIAAR 1006

Query: 412  LSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRFAFEKFPGSEPLLTTQMKSVGEAMA 471
               G +L +          A  E   DY   K   F F KF G +P+L  +M+S GE M 
Sbjct: 1007 CMAGKTLGE--------QGALKEIVPDYYSVKEAIFPFAKFQGVDPILGPEMRSTGEVMG 1058

Query: 472  LGRTFQESFQKA 483
            +GR+F  +F +A
Sbjct: 1059 VGRSFGAAFARA 1070


>gi|408479050|ref|ZP_11185269.1| carbamoyl phosphate synthase large subunit [Pseudomonas sp. R81]
          Length = 1073

 Score = 1258 bits (3254), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 628/1088 (57%), Positives = 804/1088 (73%), Gaps = 28/1088 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILILGAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPAMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  + V +++EKERPDALLPTMGGQTALN A+ L   G LEK+GVE+IGA  D 
Sbjct: 63   ATYIEPIKWQTVAKIIEKERPDALLPTMGGQTALNCALDLEREGVLEKFGVEMIGANADT 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  F +AMK+IG+  P SGI ++++E  ++   +G FP IIRP+FT+GGTGGGI
Sbjct: 123  IDKAEDRSRFDKAMKSIGLACPRSGIAHSMEEANAVLETLG-FPCIIRPSFTMGGTGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEFE IC  GL  S T ++L+++SL+GWKEYE+EV+RD  DN +I+CSIEN DPMG
Sbjct: 182  AYNREEFEEICARGLDLSPTKELLIDESLIGWKEYEMEVVRDKKDNCIIVCSIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ LR+ S+A++REIGVE GGSNVQF + P  G ++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQILRNASLAVLREIGVETGGSNVQFGICPNTGRMVVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT  KTPASFEPSIDYVVTK+PR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGYTLDELSNDITGGKTPASFEPSIDYVVTKLPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            FAFEKF  ++  LTTQMKSVGE MA+GRTFQES QKALR LE G  G      ++LD   
Sbjct: 362  FAFEKFAKADARLTTQMKSVGEVMAIGRTFQESLQKALRGLEVGVCGLD----EKLDLSN 417

Query: 507  EQ----LKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLL 562
             +    LK  L VP  +R+  +  A + GM V++I  ++ ID WFL Q ++LI  E+ + 
Sbjct: 418  PESMSVLKRELTVPGAERIWYVADAFRAGMTVEDIFGMNMIDPWFLVQIEDLIKEEEKVK 477

Query: 563  TQSVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFE 622
            T  ++++ +D  + +KR+GFSD+++A     TEK +R  R  L + P YKRVDTCAAEF 
Sbjct: 478  TLGLASIDRDMMFRLKRKGFSDQRLAKLLGVTEKNLRTHRHKLEIFPVYKRVDTCAAEFS 537

Query: 623  ANTPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIM 682
             +T Y+YS+Y+ ECE+AP+ + K++ILGGGPNRIGQGIEFDYCC H + +L+  GYETIM
Sbjct: 538  TDTAYLYSTYEEECEAAPSGRDKIMILGGGPNRIGQGIEFDYCCVHAALALREDGYETIM 597

Query: 683  MNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYL 742
            +N NPETVSTDYDTSDRLYFEP+T+EDVL ++ +E+P+G+IVQ+GGQTPLKL+       
Sbjct: 598  VNCNPETVSTDYDTSDRLYFEPVTLEDVLEIVRVEKPKGVIVQYGGQTPLKLA------- 650

Query: 743  DEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIA 802
               R   A+G   V I GTSPD+ID AEDRERF  +++ L++ QP     +SE +A+  A
Sbjct: 651  ---RALEAAG---VPIIGTSPDAIDRAEDRERFQQMVERLNLRQPPNATVRSEDEAIRAA 704

Query: 803  KEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVD 862
             +IGYP+VVRPSYVLGGRAMEIVY +E L  YL +AV+V  + PVL+D +L+ AIE+DVD
Sbjct: 705  SKIGYPLVVRPSYVLGGRAMEIVYEEEELKRYLRDAVKVSNDSPVLLDHFLNCAIEMDVD 764

Query: 863  ALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCG 922
            A+ D   +VVIG IM+HIEQAGVHSGDSAC +P  ++ +   D +     K+A  L V G
Sbjct: 765  AVCDGT-DVVIGAIMQHIEQAGVHSGDSACSLPPYSLPAHIQDEMREQVKKMALELGVVG 823

Query: 923  LMNCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEV 982
            LMN Q A+    D+Y++E NPRASRTVPFVSK IG  LA  AA VM+GK+L ++GFTKE+
Sbjct: 824  LMNVQLALQGE-DIYVIEVNPRASRTVPFVSKCIGVSLAMIAARVMAGKTLKEIGFTKEI 882

Query: 983  IPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSG 1042
            IP   SVKEAV PF KF G D +LGPEM+STGEVMG+  +F  AFAKAQ+ A + LP  G
Sbjct: 883  IPNFYSVKEAVFPFAKFPGVDPILGPEMKSTGEVMGVGDTFGEAFAKAQMGASEVLPTGG 942

Query: 1043 TVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGD 1102
            T F+S+ D  KP +  +A+  +++GF++V+T+GTA  +E  G+ V RV K+ EGRPH  D
Sbjct: 943  TAFISVRDDDKPLVAGVARDLINLGFEVVATAGTAKLIEAAGLKVRRVNKVTEGRPHVVD 1002

Query: 1103 MVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTV 1162
            M+ N ++ +++ T+ G      D   +RR  L +K+   TT++   A  EA++     TV
Sbjct: 1003 MIKNDEVTLIINTTEGRQ-SIADSYSIRRNALQHKIYCTTTIAAGEAICEALKFGPEKTV 1061

Query: 1163 TMTALQDF 1170
                LQD 
Sbjct: 1062 RR--LQDL 1067


>gi|378948796|ref|YP_005206284.1| CarB protein [Pseudomonas fluorescens F113]
 gi|359758810|gb|AEV60889.1| CarB [Pseudomonas fluorescens F113]
          Length = 1073

 Score = 1258 bits (3254), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 632/1088 (58%), Positives = 802/1088 (73%), Gaps = 28/1088 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILILGAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPAMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  + V +++EKERPDALLPTMGGQTALN A+ L   G LEK+GVE+IGA  D 
Sbjct: 63   ATYIEPIKWQTVAKIIEKERPDALLPTMGGQTALNCALDLEREGVLEKFGVEMIGANADT 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  F +AMK+IG+  P SGI ++++E  ++   +G FP IIRP+FT+GGTGGGI
Sbjct: 123  IDKAEDRSRFDKAMKSIGLDCPRSGIAHSMEEANAVLERLG-FPCIIRPSFTMGGTGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEFE IC  GL  S T ++L+++SL+GWKEYE+EV+RD  DN +I+CSIEN DPMG
Sbjct: 182  AYNREEFEEICARGLDLSPTKELLIDESLIGWKEYEMEVVRDKKDNCIIVCSIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ LR+ S+A++REIGVE GGSNVQF + P  G ++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQILRNASLAVLREIGVETGGSNVQFGICPNTGRMVVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT  KTPASFEPSIDYVVTK+PR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGYTLDELSNDITGGKTPASFEPSIDYVVTKLPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDW-D 505
            FAFEKF  ++  LTTQMKSVGE MA+GRTFQES QKALR LE G  G       +LD  D
Sbjct: 362  FAFEKFAKADARLTTQMKSVGEVMAIGRTFQESLQKALRGLEVGVCGLD----PKLDLAD 417

Query: 506  WEQ---LKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLL 562
             E    LK  L VP  +R+  +  A + GM V++I  ++ ID WFL Q ++LI  E+ + 
Sbjct: 418  PESMSVLKRELTVPGAERIWYVADAFRAGMTVEQIFGMNMIDPWFLVQIEDLIKEEEKVK 477

Query: 563  TQSVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFE 622
            T  +S++ +D  Y +KR+GFSD ++A     TEK +R  R  L V P YKRVDTCAAEF 
Sbjct: 478  TLGMSSIDRDMMYRLKRKGFSDMRLAKLLGVTEKSLRTHRHKLEVFPVYKRVDTCAAEFA 537

Query: 623  ANTPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIM 682
             +T Y+YS+Y+ ECE+AP+ + K++ILGGGPNRIGQGIEFDYCC H + +L+  GYETIM
Sbjct: 538  TDTAYLYSTYEEECEAAPSTRDKIMILGGGPNRIGQGIEFDYCCVHAALALRDDGYETIM 597

Query: 683  MNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYL 742
            +N NPETVSTDYDTSDRLYFEP+T+EDVL ++ +E+P+G+IVQ+GGQTPLKL+       
Sbjct: 598  VNCNPETVSTDYDTSDRLYFEPVTLEDVLEIVRVEKPKGVIVQYGGQTPLKLA------- 650

Query: 743  DEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIA 802
               R   A+G   V I GTSPD+ID AEDRERF  +++ L++ QP     +SE +A+  A
Sbjct: 651  ---RALEAAG---VPIIGTSPDAIDRAEDRERFQQMVERLNLRQPPNATVRSEDEAIRAA 704

Query: 803  KEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVD 862
             +IGYP+VVRPSYVLGGRAMEIVY ++ L  YL  AV+V  + PVL+D +L+ AIE+DVD
Sbjct: 705  AKIGYPLVVRPSYVLGGRAMEIVYQEDELKRYLREAVQVSNDSPVLLDHFLNCAIEMDVD 764

Query: 863  ALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCG 922
            A++D   +VVIG IM+HIEQAGVHSGDSAC +P  ++ +   D +     K+A  L V G
Sbjct: 765  AVSDG-KDVVIGAIMQHIEQAGVHSGDSACSLPPYSLPAHIQDEMREQVKKMALELGVIG 823

Query: 923  LMNCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEV 982
            LMN Q A+    D+Y++E NPRASRTVPFVSK IG  LA  AA VM+GK+L +L FTKE+
Sbjct: 824  LMNVQLALQGE-DIYVIEVNPRASRTVPFVSKCIGVSLAMIAARVMAGKTLKELNFTKEI 882

Query: 983  IPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSG 1042
            IP   SVKEAV PF KF G D +LGPEM+STGEVMG+  +F  AFAKAQ+ A + LP  G
Sbjct: 883  IPNFYSVKEAVFPFAKFPGVDPILGPEMKSTGEVMGVGDTFGEAFAKAQMGASEVLPTGG 942

Query: 1043 TVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGD 1102
            T F+S+ D  KP +  +A+  +++GF++V+T+GTA  +E  G+ V RV K+ EGRPH  D
Sbjct: 943  TAFISVRDDDKPLVAGVARDLINLGFEVVATAGTARLIEAAGLKVRRVNKVTEGRPHVVD 1002

Query: 1103 MVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTV 1162
            M+ N ++ +++ T+ G      D   +RR  L +K+   TT++   A  EA++     TV
Sbjct: 1003 MIKNDEVTLIINTTEGRQ-SIADSYSIRRNALQHKIYCTTTIAAGEAICEALKFGPEKTV 1061

Query: 1163 TMTALQDF 1170
                LQD 
Sbjct: 1062 RR--LQDL 1067


>gi|319639060|ref|ZP_07993817.1| carbamoyl-phosphate synthase large subunit [Neisseria mucosa C102]
 gi|317399638|gb|EFV80302.1| carbamoyl-phosphate synthase large subunit [Neisseria mucosa C102]
          Length = 1071

 Score = 1258 bits (3254), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 623/1070 (58%), Positives = 795/1070 (74%), Gaps = 22/1070 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTDL+ ILI+GAGPIVIGQACEFDYSG QACKAL+EEGY+VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDLKSILIIGAGPIVIGQACEFDYSGAQACKALREEGYKVILVNSNPATIMTDPEMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  + VE+++ KERPDA+LPTMGGQTALN A+ LA +G L KY VELIGA  DA
Sbjct: 63   VTYIEPIMWQTVEKIIAKERPDAILPTMGGQTALNCALDLARNGVLAKYNVELIGATEDA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  FK+AM+ IG+  P S + +T++E ++   ++G FP +IRP+FT+GG+GGGI
Sbjct: 123  IDKAEDRGRFKEAMEKIGLSCPKSFVCHTMNEALAAQEQVG-FPTLIRPSFTMGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYNK+EF AIC+ G  AS T ++L+E+S+LGWKEYE+EV+RD  DN +IICSIEN DPMG
Sbjct: 182  AYNKDEFLAICERGFDASPTHELLIEQSVLGWKEYEMEVVRDKNDNCIIICSIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGV+ GGSNVQFAVNP +GE++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQIMRNASLAVLREIGVDTGGSNVQFAVNPENGEMIVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VG++LD++ NDIT  +TPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGFTLDELRNDITGGRTPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            FAFEKFP ++  LTTQMKSVGE MA+GRT QESFQKALR LE G  G+   +      D 
Sbjct: 362  FAFEKFPAADDRLTTQMKSVGEVMAMGRTIQESFQKALRGLETGLCGFNPRS-----EDK 416

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
             +++  L  P P+RM  +  A + G  ++EIHE+  ID WFL Q ++L+  E+ +    +
Sbjct: 417  AEIRRELANPGPERMLFVADAFRAGFTLEEIHEICAIDPWFLAQIEDLVKEEKSVSDGQL 476

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
             ++       +KR+GFSDK++A     +EKEVRE R +L + P YKRVDTCAAEF   T 
Sbjct: 477  QDLDYAALRRLKRKGFSDKRLAQLLNVSEKEVREHRYALNLHPVYKRVDTCAAEFATETA 536

Query: 627  YMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSN 686
            Y+YS+Y+ ECES P+ +KKV+ILGGGPNRIGQGIEFDYCC H + +L+ +G+ETIM+N N
Sbjct: 537  YLYSTYEEECESRPSDRKKVMILGGGPNRIGQGIEFDYCCVHAALALRESGFETIMVNCN 596

Query: 687  PETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHR 746
            PETVSTD+DTSDRLYFEPLT+EDVL ++  E P G+IV +GGQTPLKL+           
Sbjct: 597  PETVSTDFDTSDRLYFEPLTLEDVLEIVRTENPWGVIVHYGGQTPLKLA----------- 645

Query: 747  LPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEIG 806
              +A  +  V I GTS DSIDAAEDRERF  ++ +L + QP   IA +E +AL  A+EIG
Sbjct: 646  --NALVENGVNIIGTSADSIDAAEDRERFQKVLNDLGLRQPPNRIAHNEEEALVKAEEIG 703

Query: 807  YPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALAD 866
            YP+VVRPSYVLGGRAM+IV++ E L  Y+  AV+V  + PVL+D +L++AIE+DVD ++D
Sbjct: 704  YPLVVRPSYVLGGRAMQIVHSAEELQKYMREAVQVSEDSPVLLDFFLNNAIEVDVDCVSD 763

Query: 867  SCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNC 926
               +VVIGGIM+H+EQAG+HSGDS C +P  ++S    D I   T  +A  L V GLMN 
Sbjct: 764  G-QDVVIGGIMQHVEQAGIHSGDSGCSLPPYSLSEEIQDEIRRQTKAMAYALGVVGLMNV 822

Query: 927  QYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPKH 986
            Q+A+   G V++LE NPRASRTVPFVSKA G PLAK  A VM+G SL + G  KEVIP  
Sbjct: 823  QFAV-QDGVVFVLEVNPRASRTVPFVSKATGVPLAKVGARVMAGISLKEQGVEKEVIPDF 881

Query: 987  VSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVFL 1046
             +VKEAV PF KF G D +LGPEMRSTGEVMG+  SF  A+ KAQ+ AG++L  +G +FL
Sbjct: 882  YAVKEAVFPFIKFPGVDTILGPEMRSTGEVMGVGASFGEAYFKAQLGAGERLSTTGKIFL 941

Query: 1047 SLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVAN 1106
            ++ D  KP + + A+ F  +G+ + +T GTA +L+  GI V+ V K+ EGRPH  D + N
Sbjct: 942  AVRDEDKPLIVKTAQNFQALGYGVCATRGTAEYLKEHGIIVQAVNKVQEGRPHIVDAIKN 1001

Query: 1107 GQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRS 1156
            G+I ++V T         D   +RR  L  +VP  TT++G  A +E  +S
Sbjct: 1002 GEIALVVNTVGSTVQSVTDSHSIRRTSLTQRVPQYTTIAGGEAMSEGAKS 1051


>gi|398856600|ref|ZP_10612320.1| carbamoyl-phosphate synthase, large subunit [Pseudomonas sp. GM79]
 gi|398242987|gb|EJN28586.1| carbamoyl-phosphate synthase, large subunit [Pseudomonas sp. GM79]
          Length = 1073

 Score = 1257 bits (3253), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 627/1088 (57%), Positives = 804/1088 (73%), Gaps = 28/1088 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILILGAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPAMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  + V +++EKERPDALLPTMGGQTALN A+ L   G LEK+GVE+IGA  D 
Sbjct: 63   ATYIEPIKWQTVAKIIEKERPDALLPTMGGQTALNCALDLEREGVLEKFGVEMIGANADT 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  F +AMK+IG+  P SGI ++++E  ++   +G FP IIRP+FT+GGTGGGI
Sbjct: 123  IDKAEDRSRFDKAMKSIGLDCPRSGIAHSMEEANAVLERLG-FPCIIRPSFTMGGTGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEFE IC  GL  S T ++L+++SL+GWKEYE+EV+RD  DN +I+CSIEN DPMG
Sbjct: 182  AYNREEFEEICARGLDLSPTKELLIDESLIGWKEYEMEVVRDKKDNCIIVCSIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ LR+ S+A++REIGVE GGSNVQF + P  G ++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQILRNASLAVLREIGVETGGSNVQFGICPNTGRMVVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT  KTPASFEPSIDYVVTK+PR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGYTLDELSNDITGGKTPASFEPSIDYVVTKLPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            FAFEKFP ++  LTTQMKSVGE MA+GRTFQES QKALR LE G  G      ++LD   
Sbjct: 362  FAFEKFPKADARLTTQMKSVGEVMAIGRTFQESLQKALRGLEVGVCGLD----EKLDLSN 417

Query: 507  EQ----LKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLL 562
             +    LK  L VP  +R+  +  A + G+ V++I  ++ ID WFL Q ++LI  E+ + 
Sbjct: 418  PESMSILKRELTVPGAERIWYVADAFRAGLSVEDIFGMNMIDPWFLVQIEDLIKEEEKVK 477

Query: 563  TQSVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFE 622
            T  ++++  D  + +KR+GFSD ++A     TEK +R  R  L + P YKRVDTCAAEF 
Sbjct: 478  TLGLASIDHDVMFRLKRKGFSDMRLAKLLGVTEKALRRHRHKLEIFPVYKRVDTCAAEFA 537

Query: 623  ANTPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIM 682
             +T Y+YS+Y+ ECE+AP+ + K++ILGGGPNRIGQGIEFDYCC H + +L+  GYETIM
Sbjct: 538  TDTAYLYSTYEEECEAAPSGRDKIMILGGGPNRIGQGIEFDYCCVHAALALREDGYETIM 597

Query: 683  MNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYL 742
            +N NPETVSTDYDTSDRLYFEP+T+EDVL ++ +E+P+G+IVQ+GGQTPLKL+    + L
Sbjct: 598  VNCNPETVSTDYDTSDRLYFEPVTLEDVLEIVRVEKPKGVIVQYGGQTPLKLA----RAL 653

Query: 743  DEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIA 802
            +E  +P         I GTSPD+ID AEDRERF  +++ L++ QP     +SE +A+  A
Sbjct: 654  EEAGVP---------IIGTSPDAIDRAEDRERFQQMVERLNLRQPPNATVRSEDEAIRAA 704

Query: 803  KEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVD 862
             +IGYP+VVRPSYVLGGRAMEIVY +E L  YL +AV+V  + PVL+D +L+ AIE+DVD
Sbjct: 705  AKIGYPLVVRPSYVLGGRAMEIVYEEEELKRYLRDAVKVSNDSPVLLDHFLNCAIEMDVD 764

Query: 863  ALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCG 922
            A+ D   +VVIG IM+HIEQAGVHSGDSAC +P  ++ +   D +     K+A  L V G
Sbjct: 765  AVCDGT-DVVIGAIMQHIEQAGVHSGDSACSLPPYSLPAHIQDEMREQVKKMALELGVVG 823

Query: 923  LMNCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEV 982
            LMN Q A+    D+Y++E NPRASRTVPFVSK IG  LA  AA VM+GK+L ++GFTKE+
Sbjct: 824  LMNVQLALQGE-DIYVIEVNPRASRTVPFVSKCIGVSLAMIAARVMAGKTLKEIGFTKEI 882

Query: 983  IPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSG 1042
            IP   SVKEAV PF KF G D +LGPEM+STGEVMG+  +F  AFAKAQ+ A + LP  G
Sbjct: 883  IPNFYSVKEAVFPFAKFPGVDPILGPEMKSTGEVMGVGDTFGEAFAKAQMGASEVLPTGG 942

Query: 1043 TVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGD 1102
            T F+S+ D  KP +  +A+  +++GF++V+T+GTA  +E  G+ V RV K+ EGRPH  D
Sbjct: 943  TAFISVRDDDKPLVAGVARDLINLGFEVVATAGTAKLIEAAGLKVRRVNKVTEGRPHVVD 1002

Query: 1103 MVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTV 1162
            M+ N ++ +++ T+ G      D   +RR  L +K+   TT++   A  EA++     TV
Sbjct: 1003 MIKNDEVTLIINTTEGRQ-SIADSYSIRRNALQHKIYCTTTIAAGEAICEALKFGPEKTV 1061

Query: 1163 TMTALQDF 1170
                LQD 
Sbjct: 1062 RR--LQDL 1067


>gi|261379319|ref|ZP_05983892.1| carbamoyl-phosphate synthase, large subunit [Neisseria subflava
            NJ9703]
 gi|284797755|gb|EFC53102.1| carbamoyl-phosphate synthase, large subunit [Neisseria subflava
            NJ9703]
          Length = 1071

 Score = 1257 bits (3253), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 622/1070 (58%), Positives = 795/1070 (74%), Gaps = 22/1070 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTDL+ ILI+GAGPIVIGQACEFDYSG QACKAL+EEGY+VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDLKSILIIGAGPIVIGQACEFDYSGAQACKALREEGYKVILVNSNPATIMTDPEMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  + VE+++ KERPDA+LPTMGGQTALN A+ LA +G L KY VELIGA  DA
Sbjct: 63   VTYIEPIMWQTVEKIIAKERPDAILPTMGGQTALNCALDLARNGVLAKYNVELIGATEDA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  FK+AM+ IG+  P S + +T++E ++   ++G FP +IRP+FT+GG+GGGI
Sbjct: 123  IDKAEDRGRFKEAMEKIGLSCPKSFVCHTMNEALAAQEQVG-FPTLIRPSFTMGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYNK+EF AIC+ G  AS T ++L+E+S+LGWKEYE+EV+RD  DN +IICSIEN DPMG
Sbjct: 182  AYNKDEFLAICERGFDASPTHELLIEQSVLGWKEYEMEVVRDKNDNCIIICSIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGV+ GGSNVQFAVNP +GE++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQIMRNASLAVLREIGVDTGGSNVQFAVNPENGEMIVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VG++LD++ NDIT  +TPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGFTLDELRNDITGGRTPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            FAFEKFP ++  LTTQMKSVGE MA+GRT QESFQKALR LE G  G+   +      D 
Sbjct: 362  FAFEKFPAADDRLTTQMKSVGEVMAIGRTIQESFQKALRGLETGLCGFNPRS-----EDK 416

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
             +++  L  P P+RM  +  A + G  ++EIHE+  ID WFL Q ++L+  E+ +    +
Sbjct: 417  AEIRRELANPGPERMLFVADAFRAGFTLEEIHEICAIDPWFLAQIEDLVKEEKSVSDGQL 476

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
             ++       +KR+GFSDK++A     +EKEVRE R +L + P YKRVDTCAAEF   T 
Sbjct: 477  QDLDYAALRRLKRKGFSDKRLAQLLNVSEKEVREHRYALNLHPVYKRVDTCAAEFATETA 536

Query: 627  YMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSN 686
            Y+YS+Y+ ECES P+ +KKV+ILGGGPNRIGQGIEFDYCC H + +L+ +G+ETIM+N N
Sbjct: 537  YLYSTYEEECESRPSDRKKVMILGGGPNRIGQGIEFDYCCVHAALALRESGFETIMVNCN 596

Query: 687  PETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHR 746
            PETVSTD+DTSDRLYFEPLT+EDVL ++  E P G+IV +GGQTPLKL+           
Sbjct: 597  PETVSTDFDTSDRLYFEPLTLEDVLEIVRTENPWGVIVHYGGQTPLKLA----------- 645

Query: 747  LPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEIG 806
              +A  +  V I GTS DSIDAAEDRERF  ++ +L + QP   IA +E +AL  A+EIG
Sbjct: 646  --NALVENGVNIIGTSADSIDAAEDRERFQKVLNDLGLRQPPNRIAHNEEEALVKAEEIG 703

Query: 807  YPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALAD 866
            YP+VVRPSYVLGGRAM+IV++ E L  Y+  AV+V  + PVL+D +L++AIE+DVD ++D
Sbjct: 704  YPLVVRPSYVLGGRAMQIVHSTEELQKYMREAVQVSEDSPVLLDFFLNNAIEVDVDCVSD 763

Query: 867  SCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNC 926
               +VVIGGIM+H+EQAG+HSGDS C +P  ++S    D I   T  +A  L V GLMN 
Sbjct: 764  G-QDVVIGGIMQHVEQAGIHSGDSGCSLPPYSLSEEIQDEIRRQTKAMAYALGVVGLMNV 822

Query: 927  QYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPKH 986
            Q+A+   G V++LE NPRASRT+PFVSKA G PLAK  A VM+G SL + G  KEVIP  
Sbjct: 823  QFAV-QDGVVFVLEVNPRASRTIPFVSKATGVPLAKVGARVMAGISLKEQGVEKEVIPDF 881

Query: 987  VSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVFL 1046
             +VKEAV PF KF G D +LGPEMRSTGEVMG+  SF  A+ KAQ+ AG++L  +G +FL
Sbjct: 882  YAVKEAVFPFIKFPGVDTILGPEMRSTGEVMGVGASFGEAYFKAQLGAGERLSTTGKIFL 941

Query: 1047 SLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVAN 1106
            ++ D  KP + + A+ F  +G+ + +T GTA +L+  GI V+ V K+ EGRPH  D + N
Sbjct: 942  AVRDEDKPLIVKTAQNFQALGYGVCATRGTAEYLKEHGIIVQAVNKVQEGRPHIVDAIKN 1001

Query: 1107 GQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRS 1156
            G+I ++V T         D   +RR  L  +VP  TT++G  A +E  +S
Sbjct: 1002 GEIALVVNTVGSTVQSVTDSHSIRRTSLTQRVPQYTTIAGGEAMSEGAKS 1051


>gi|452124822|ref|ZP_21937406.1| carbamoyl phosphate synthase large subunit [Bordetella holmesii F627]
 gi|451924052|gb|EMD74193.1| carbamoyl phosphate synthase large subunit [Bordetella holmesii F627]
          Length = 1079

 Score = 1257 bits (3253), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 645/1078 (59%), Positives = 810/1078 (75%), Gaps = 27/1078 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTDL+ ILI+GAGPI+IGQACEFDYSG QACKALK EGY  IL+NSNPATIMTDP  AD
Sbjct: 3    KRTDLKSILIIGAGPIIIGQACEFDYSGAQACKALKAEGYRTILVNSNPATIMTDPETAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+T + VE+++E+ERPDALLPTMGGQTALN A+ LA +G L KYGVELIGA   A
Sbjct: 63   VTYIEPITWQAVEKIIERERPDALLPTMGGQTALNCALDLAHNGVLTKYGVELIGANEHA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECIS----IANEIGE--FPLIIRPAFTLG 261
            I+KAEDR  FKQAM  I + +  SG+ +TLDE       IA EIG   FP++IRP+FTLG
Sbjct: 123  IEKAEDRQKFKQAMTDIDLASAKSGVAHTLDEAWEVQRRIAAEIGTAGFPVVIRPSFTLG 182

Query: 262  GTGGGIAYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIE 321
            GTGGGIAYN EEFE IC+ GL AS T+++L+E+SLLGWKE+E+EV+RD ADN +I+CSIE
Sbjct: 183  GTGGGIAYNAEEFETICRRGLEASPTNELLIEESLLGWKEFEMEVVRDKADNCIIVCSIE 242

Query: 322  NVDPMGVHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEV 381
            N+DPMGVHTGDSITVAPAQTLTDKEYQ +RD SIA++REIGV+ GGSNVQFAVNP +G +
Sbjct: 243  NLDPMGVHTGDSITVAPAQTLTDKEYQIMRDASIAVLREIGVDTGGSNVQFAVNPKNGRM 302

Query: 382  MVIEMNPRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITK-KTPASFEPSIDYV 440
            +VIEMNPRVSRSSALASKATGFPIAK+AA+L++GY+LD++ N+IT   TPASFEPSIDYV
Sbjct: 303  IVIEMNPRVSRSSALASKATGFPIAKVAARLAIGYTLDELQNEITGGATPASFEPSIDYV 362

Query: 441  VTKIPRFAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVK 500
            VTK+PRFAFEKFP ++  LTTQMKSVGE MA+GRTFQESFQKALR LE G  G     + 
Sbjct: 363  VTKVPRFAFEKFPQADARLTTQMKSVGEVMAMGRTFQESFQKALRGLEVGVDG-----LN 417

Query: 501  ELDWDWEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQF 560
            +   D E+L+  L  P P+R+  +  A  +G  +DE+H ++ ID WFL Q KE++D+E  
Sbjct: 418  QKTTDREKLQVELGEPGPERIWYVGDAFAQGFTLDEVHNITHIDPWFLAQIKEIVDIELA 477

Query: 561  LLTQSVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAE 620
            L  +++S++     +E+KRRGFSD+++AF   S+E EVR+ R  L V P YKRVDTCAAE
Sbjct: 478  LEQKTLSDLDYATLFELKRRGFSDRRLAFLLDSSESEVRKLRHQLNVRPVYKRVDTCAAE 537

Query: 621  FEANTPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYET 680
            F   T YMYS+Y+ ECE+ PT +KK+++LGGGPNRIGQGIEFDYCC H S +L+  G+ET
Sbjct: 538  FATRTAYMYSTYEEECEAQPTDRKKIIVLGGGPNRIGQGIEFDYCCVHASLALREDGFET 597

Query: 681  IMMNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQ 740
            IM+N NPETVSTDYDTSDRLYFEPLT+EDVL ++  E P G+IVQ+GGQTPLKL+     
Sbjct: 598  IMVNCNPETVSTDYDTSDRLYFEPLTLEDVLEIVHKENPVGMIVQYGGQTPLKLA----- 652

Query: 741  YLDEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALA 800
                 R   A+G   V I GTSP+SID AEDRERF  ++ +L + QP    A++EA+ALA
Sbjct: 653  -----RALEANG---VPIIGTSPESIDVAEDRERFQKLLNKLGLRQPPNRTARTEAEALA 704

Query: 801  IAKEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEID 860
             A EIGYP+VVRPSYVLGGRAMEIV+  + L  Y+  AV+V  + PVL+D +L++A E+D
Sbjct: 705  HAAEIGYPLVVRPSYVLGGRAMEIVHEQQDLERYMRAAVKVSNDSPVLLDHFLNNATEVD 764

Query: 861  VDALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNV 920
            VD LAD    V IGG+MEHIEQAGVHSGDSAC +P  ++S+  +  I   T  +A+ LNV
Sbjct: 765  VDCLADG-ETVFIGGVMEHIEQAGVHSGDSACSLPPYSLSADIVAEIKRQTTTMARALNV 823

Query: 921  CGLMNCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTK 980
             GLMN Q+A+   GDVY+LE NPRASRTVP+VSKA G  LAK AA  M+G++L   G T+
Sbjct: 824  SGLMNVQFAV-QDGDVYVLEVNPRASRTVPYVSKATGLQLAKIAARAMAGRTLAQQGVTE 882

Query: 981  EVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPL 1040
            EV+P +  VKEAV PF KF G D +LGPEM+STGEVMG+  SF  AF K+Q+AAG +LP 
Sbjct: 883  EVVPAYFCVKEAVFPFVKFPGVDTILGPEMKSTGEVMGVGRSFGEAFVKSQLAAGVRLPE 942

Query: 1041 SGTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHA 1100
            SGTVF+S+ +  KP    +A+   ++G K+V+T GTA  +E  GI V+ V K+ EGRPH 
Sbjct: 943  SGTVFISVKNQDKPRAVEVARGLHNLGIKLVATRGTAAEIEAAGIPVQVVNKVTEGRPHI 1002

Query: 1101 GDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLK 1158
             DMV NG++ +++ T         D   +R + LA ++   TT++GA A  E ++ L+
Sbjct: 1003 VDMVKNGEVSLVINTVEERRNAIADSRTIRTQALANRITFYTTIAGARAAVEGMQFLR 1060


>gi|333374705|ref|ZP_08466540.1| carbamoyl-phosphate synthase, large subunit [Kingella kingae ATCC
            23330]
 gi|332974637|gb|EGK11554.1| carbamoyl-phosphate synthase, large subunit [Kingella kingae ATCC
            23330]
          Length = 1070

 Score = 1257 bits (3253), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 625/1077 (58%), Positives = 805/1077 (74%), Gaps = 24/1077 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTDL+ ILI+GAGPIVIGQACEFDYSG QACKAL EEGY+VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDLKSILIIGAGPIVIGQACEFDYSGAQACKALCEEGYKVILVNSNPATIMTDPNIAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  + VE+++ KERPDA+LPTMGGQTALN A+ LA +G L KY VELIGA  DA
Sbjct: 63   VTYIEPIMWQTVEKIIAKERPDAILPTMGGQTALNCALDLARNGVLAKYNVELIGATEDA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  FK AM  IG+ TP S I +T++E +    E+G FP +IRP+FT+GG+GGGI
Sbjct: 123  IDKAEDRGRFKDAMAKIGLNTPKSFICHTMNEALRAQEEVG-FPTLIRPSFTMGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYNK+EF AIC+ G  AS T ++L+E+S+LGWKEYE+EV+RD  DN +IICSIEN DPMG
Sbjct: 182  AYNKDEFLAICERGFDASPTHELLIEQSVLGWKEYEMEVVRDKKDNCIIICSIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGV+ GGSNVQFAVNP +GE++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQIMRNASLAVLREIGVDTGGSNVQFAVNPENGEMIVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VG++LD++ NDIT  +TPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGFTLDELRNDITGGRTPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            FAFEKFP ++  LTTQMKSVGE MA+GRT QESFQKALR LE G  G+   +      D 
Sbjct: 362  FAFEKFPAADDTLTTQMKSVGEVMAMGRTIQESFQKALRGLETGLCGFNPRS-----QDK 416

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
             +++  L  P  +RM  +  A + G  + EI+++  ID WFL Q ++L+  EQ +++ S+
Sbjct: 417  TEIRRELATPRAERMLFVADAFRAGFSIQEIYDICKIDFWFLAQIEDLVKEEQKIVSGSL 476

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
             ++  +    +KR+GFSDK+IA   +  EK+VRE R +L + P YKRVDTCAAEF+ +T 
Sbjct: 477  QDLDFNTLRRLKRKGFSDKRIAQLLELPEKDVREHRYNLNLHPVYKRVDTCAAEFDTDTA 536

Query: 627  YMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSN 686
            Y+YS+Y+ ECE+ P+ +KKV+ILGGGPNRIGQGIEFDYCC H + +L+ +G+E IM+N N
Sbjct: 537  YLYSTYEEECEARPSDRKKVMILGGGPNRIGQGIEFDYCCVHAALALRESGFEMIMVNCN 596

Query: 687  PETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHR 746
            PETVSTD+DTSDRLYFEPLT+EDVL ++  E P G+IV +GGQTPLKL+           
Sbjct: 597  PETVSTDFDTSDRLYFEPLTLEDVLEIVRKENPWGVIVHYGGQTPLKLA----------- 645

Query: 747  LPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEIG 806
              +A  +  V I GTS DSIDAAEDRERF  ++ EL + QP   IA++E +AL +A+EIG
Sbjct: 646  --NALVENGVNIIGTSADSIDAAEDRERFQQVLNELGLRQPPNRIARNETEALTLAEEIG 703

Query: 807  YPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALAD 866
            YP+VVRPSYVLGGRAM++V+++E L  Y+  AV+V  + PVL+D +L++AIE+DVD ++D
Sbjct: 704  YPLVVRPSYVLGGRAMQVVHSEEQLQRYMREAVQVSEDSPVLLDFFLNNAIEVDVDCVSD 763

Query: 867  SCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNC 926
                VVIGGIM+H+EQAG+HSGDSAC +P  ++S    D I   T  +A  LNV GLMN 
Sbjct: 764  G-KEVVIGGIMQHVEQAGIHSGDSACSLPPYSLSVEIQDEIRRQTKAMAFALNVKGLMNV 822

Query: 927  QYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPKH 986
            Q+A+   G V++LE NPRASRTVPFVSKA   PLAK  A  M+G SL +  FT E+IP  
Sbjct: 823  QFAV-QDGVVFVLEVNPRASRTVPFVSKATSVPLAKIGARAMAGISLQEQNFTAEIIPDF 881

Query: 987  VSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVFL 1046
             +VKEAV PF KF G D +LGPEMRSTGEVMG+  +F  A+ KAQ+ AG++   +G VF+
Sbjct: 882  YAVKEAVFPFIKFPGVDTILGPEMRSTGEVMGVAETFGEAYLKAQLGAGERFGKTGKVFI 941

Query: 1047 SLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVAN 1106
            ++ D  KP + + AK F  +G+ + +T GTA +L   GI  + V K+ EGRPH  DM+ N
Sbjct: 942  AVRDEDKPLILQTAKNFQALGYGLCATRGTAAYLAEHGIIAQPVNKVREGRPHIVDMIKN 1001

Query: 1107 GQIQMMVITSSGDSLDQI-DGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTV 1162
            G+I  +VI +SG + ++I D  ++RR  L+ +VP  TTV+G  A +  +++L    V
Sbjct: 1002 GEI-ALVINTSGSTGNEISDSQEIRRSALSQRVPQYTTVAGGEAISFGVKALSDTHV 1057


>gi|398898719|ref|ZP_10648520.1| carbamoyl-phosphate synthase, large subunit [Pseudomonas sp. GM50]
 gi|398183781|gb|EJM71254.1| carbamoyl-phosphate synthase, large subunit [Pseudomonas sp. GM50]
          Length = 1073

 Score = 1257 bits (3253), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 627/1088 (57%), Positives = 804/1088 (73%), Gaps = 28/1088 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILILGAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPAMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  + V +++EKERPDALLPTMGGQTALN A+ L   G LEK+GVE+IGA  D 
Sbjct: 63   ATYIEPIKWQTVAKIIEKERPDALLPTMGGQTALNCALDLEREGVLEKFGVEMIGANADT 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  F +AMK+IG+  P SGI ++++E  ++   +G FP IIRP+FT+GGTGGGI
Sbjct: 123  IDKAEDRSRFDKAMKSIGLDCPRSGIAHSMEEANAVLERLG-FPCIIRPSFTMGGTGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEFE IC  GL  S T ++L+++SL+GWKEYE+EV+RD  DN +I+CSIEN DPMG
Sbjct: 182  AYNREEFEEICARGLDLSPTKELLIDESLIGWKEYEMEVVRDKKDNCIIVCSIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ LR+ S+A++REIGVE GGSNVQF + P  G ++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQILRNASLAVLREIGVETGGSNVQFGICPDTGRMVVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT  KTPASFEPSIDYVVTK+PR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGYTLDELSNDITGGKTPASFEPSIDYVVTKLPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            FAFEKFP ++  LTTQMKSVGE MA+GRTFQES QKALR LE G  G      ++LD   
Sbjct: 362  FAFEKFPKADARLTTQMKSVGEVMAIGRTFQESLQKALRGLEVGVCGLD----EKLDLSS 417

Query: 507  EQ----LKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLL 562
             +    LK  L VP  +R+  +  A + G+ V++I  ++ ID WFL Q ++LI  E+ + 
Sbjct: 418  PESMSILKRELTVPGAERIWYVADAFRAGLSVEDIFGMNMIDPWFLVQIEDLIKEEEKVK 477

Query: 563  TQSVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFE 622
            T  ++++  D  + +KR+GFSD ++A     TEK +R  R  L + P YKRVDTCAAEF 
Sbjct: 478  TLGLASIDHDVMFRLKRKGFSDMRLAKLLGVTEKALRRHRHKLEIFPVYKRVDTCAAEFA 537

Query: 623  ANTPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIM 682
             +T Y+YS+Y+ ECE+AP+ + K++ILGGGPNRIGQGIEFDYCC H + +L+  GYETIM
Sbjct: 538  TDTAYLYSTYEEECEAAPSGRDKIMILGGGPNRIGQGIEFDYCCVHAALALREDGYETIM 597

Query: 683  MNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYL 742
            +N NPETVSTDYDTSDRLYFEP+T+EDVL ++ +E+P+G+IVQ+GGQTPLKL+    + L
Sbjct: 598  VNCNPETVSTDYDTSDRLYFEPVTLEDVLEIVRVEKPKGVIVQYGGQTPLKLA----RAL 653

Query: 743  DEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIA 802
            +E  +P         I GTSPD+ID AEDRERF  +++ L++ QP     +SE +A+  A
Sbjct: 654  EEAGVP---------IIGTSPDAIDRAEDRERFQQMVERLNLRQPPNATVRSEDEAIRAA 704

Query: 803  KEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVD 862
             +IGYP+VVRPSYVLGGRAMEIVY +E L  YL +AV+V  + PVL+D +L+ AIE+DVD
Sbjct: 705  AKIGYPLVVRPSYVLGGRAMEIVYEEEELKRYLRDAVKVSNDSPVLLDHFLNCAIEMDVD 764

Query: 863  ALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCG 922
            A+ D   +VVIG IM+HIEQAGVHSGDSAC +P  ++ +   D +     K+A  L V G
Sbjct: 765  AVCDGT-DVVIGAIMQHIEQAGVHSGDSACSLPPYSLPAHIQDEMREQVKKMALELGVVG 823

Query: 923  LMNCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEV 982
            LMN Q A+    D+Y++E NPRASRTVPFVSK IG  LA  AA VM+GK+L ++GFTKE+
Sbjct: 824  LMNVQLALQGE-DIYVIEVNPRASRTVPFVSKCIGVSLAMIAARVMAGKTLKEIGFTKEI 882

Query: 983  IPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSG 1042
            IP   SVKEAV PF KF G D +LGPEM+STGEVMG+  +F  AFAKAQ+ A + LP  G
Sbjct: 883  IPNFYSVKEAVFPFAKFPGVDPILGPEMKSTGEVMGVGDTFGEAFAKAQMGASEVLPTGG 942

Query: 1043 TVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGD 1102
            T F+S+ D  KP +  +A+  +++GF++V+T+GTA  +E  G+ V RV K+ EGRPH  D
Sbjct: 943  TAFISVRDDDKPLVAGVARDLINLGFEVVATAGTAKLIEAAGLKVRRVNKVTEGRPHVVD 1002

Query: 1103 MVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTV 1162
            M+ N ++ +++ T+ G      D   +RR  L +K+   TT++   A  EA++     TV
Sbjct: 1003 MIKNDEVTLIINTTEGRQ-SIADSYSIRRNALQHKIYCTTTIAAGEAICEALKFGPEKTV 1061

Query: 1163 TMTALQDF 1170
                LQD 
Sbjct: 1062 RR--LQDL 1067


>gi|399004731|ref|ZP_10707340.1| carbamoyl-phosphate synthase, large subunit [Pseudomonas sp. GM17]
 gi|398128871|gb|EJM18251.1| carbamoyl-phosphate synthase, large subunit [Pseudomonas sp. GM17]
          Length = 1073

 Score = 1257 bits (3252), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 631/1088 (57%), Positives = 801/1088 (73%), Gaps = 28/1088 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILILGAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPAMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  + V +++EKERPDALLPTMGGQTALN A+ L   G LEK+GVE+IGA  D 
Sbjct: 63   ATYIEPIKWQTVAKIIEKERPDALLPTMGGQTALNCALDLEREGVLEKFGVEMIGANADT 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  F  AMK IG++ P SGI +++DE  ++  ++G FP IIRP+FT+GGTGGGI
Sbjct: 123  IDKAEDRSRFDTAMKAIGLECPRSGIAHSMDEANAVLEKLG-FPCIIRPSFTMGGTGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEFE IC  GL  S T ++L+++SL+GWKEYE+EV+RD  DN +I+CSIEN DPMG
Sbjct: 182  AYNREEFEEICARGLDLSPTKELLIDESLIGWKEYEMEVVRDKKDNCIIVCSIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ LR+ S+A++REIGVE GGSNVQF + P  G ++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQILRNASLAVLREIGVETGGSNVQFGICPNTGRMVVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT  KTPASFEPSIDYVVTK+PR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGYTLDELSNDITGGKTPASFEPSIDYVVTKLPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSG----WGCSNVKEL 502
            FAFEKF  ++  LTTQMKSVGE MA+GRTFQES QKALR LE G  G       SN + +
Sbjct: 362  FAFEKFAKADARLTTQMKSVGEVMAIGRTFQESLQKALRGLEVGVCGLDPKLDLSNPESM 421

Query: 503  DWDWEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLL 562
            +     LK  L VP  +R+  +  A + GM V++I  ++ ID WFL Q ++LI  E+ + 
Sbjct: 422  NV----LKRELTVPGAERIWYVADAFRAGMTVEQIFGMNMIDPWFLVQIEDLIKEEEKVK 477

Query: 563  TQSVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFE 622
            T  +S + +D  + +KR+GFSD+++A     TEK +R  R  L V P YKRVDTCAAEF 
Sbjct: 478  TLGLSAIDRDLMFRLKRKGFSDQRLAKLLGVTEKNLRTHRHKLEVFPVYKRVDTCAAEFA 537

Query: 623  ANTPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIM 682
             +T Y+YS+Y+ ECE+AP+ + K++ILGGGPNRIGQGIEFDYCC H + +L+  GYETIM
Sbjct: 538  TDTAYLYSTYEEECEAAPSGRDKIMILGGGPNRIGQGIEFDYCCVHAALALRDDGYETIM 597

Query: 683  MNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYL 742
            +N NPETVSTDYDTSDRLYFEP+T+EDVL ++ +E+P+G+IVQ+GGQTPLKL+       
Sbjct: 598  VNCNPETVSTDYDTSDRLYFEPVTLEDVLEIVRVEKPKGVIVQYGGQTPLKLA------- 650

Query: 743  DEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIA 802
               R   A+G   V I GTSPD+ID AEDRERF  +++ L++ QP     +SE +A+  A
Sbjct: 651  ---RALEAAG---VPIIGTSPDAIDRAEDRERFQQMVERLNLRQPPNATVRSEDEAIRAA 704

Query: 803  KEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVD 862
             +IGYP+VVRPSYVLGGRAMEIVY +E L  YL  AV+V  + PVL+D +L+ AIE+DVD
Sbjct: 705  AKIGYPLVVRPSYVLGGRAMEIVYEEEELKRYLREAVQVSNDSPVLLDHFLNCAIEMDVD 764

Query: 863  ALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCG 922
            A+ D   +VVIG IM+HIEQAGVHSGDSAC +P  ++ +   D +     K+A  L V G
Sbjct: 765  AVCDG-KDVVIGAIMQHIEQAGVHSGDSACSLPPYSLPAHIQDEMREQVKKMALELGVVG 823

Query: 923  LMNCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEV 982
            LMN Q A+     +Y++E NPRASRTVPFVSK IG  LA  AA VM+GK+L +LGFTKE+
Sbjct: 824  LMNVQLALQGE-QIYVIEVNPRASRTVPFVSKCIGVSLAMIAARVMAGKTLKELGFTKEI 882

Query: 983  IPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSG 1042
            IP   SVKEAV PF KF G D +LGPEM+STGEVMG+  +F  AFAKAQ+ A + LP  G
Sbjct: 883  IPNFYSVKEAVFPFAKFPGVDPILGPEMKSTGEVMGVGDTFGEAFAKAQMGASEVLPTGG 942

Query: 1043 TVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGD 1102
            T F+S+ D  KP +  +A+  +++GF++V+T+GTA  +E  G+ V RV K+ EGRPH  D
Sbjct: 943  TAFISVRDDDKPLVAGVARDLINLGFEVVATAGTAKLIEAAGLKVRRVNKVTEGRPHVVD 1002

Query: 1103 MVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTV 1162
            M+ N ++ +++ T+ G      D   +RR  L +K+   TT++   A  EA++     TV
Sbjct: 1003 MIKNDEVTLIINTTEGRQ-SIADSYSIRRNALQHKIYCTTTIAAGEAICEALKFGPEKTV 1061

Query: 1163 TMTALQDF 1170
                LQD 
Sbjct: 1062 RR--LQDL 1067


>gi|320353055|ref|YP_004194394.1| carbamoyl-phosphate synthase large subunit [Desulfobulbus propionicus
            DSM 2032]
 gi|320121557|gb|ADW17103.1| carbamoyl-phosphate synthase large subunit [Desulfobulbus propionicus
            DSM 2032]
          Length = 1074

 Score = 1257 bits (3252), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 633/1084 (58%), Positives = 816/1084 (75%), Gaps = 18/1084 (1%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD+ KILI+G+GPI+I QACEFDYSG QA KALKEEGYEV+LINSNPATIMTDPGLAD
Sbjct: 3    KRTDIHKILIIGSGPIIISQACEFDYSGAQAVKALKEEGYEVVLINSNPATIMTDPGLAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
            RTYI P+TPE V +V+E+ERPDALLPT+GGQT LN A+ +AE G LE+YGVEL+ A ++ 
Sbjct: 63   RTYIEPITPECVAKVIERERPDALLPTLGGQTGLNTAIKVAELGVLERYGVELLAANIEV 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I+KAE R+ F+ AM+ IG+K P S I +T+DE ++    IG FP+I+RP+FTLGGTGGG+
Sbjct: 123  IRKAEGREEFRDAMRKIGLKVPESAIVHTIDEAMAAGERIG-FPIIVRPSFTLGGTGGGV 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+ E   +  AGL  S+T++V++E+SLLGWKEYELEVMRD  DNVVIICSIENVD MG
Sbjct: 182  AYNRAELNKMVTAGLDLSMTTEVMLERSLLGWKEYELEVMRDRNDNVVIICSIENVDAMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTD+EYQ +RD +IAIIREIGVE GGSNVQFAVNP DGE+MVIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDREYQEMRDAAIAIIREIGVETGGSNVQFAVNPADGELMVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRF 447
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD+I NDIT++T ASFEP+IDY V KIPR+
Sbjct: 302  PRVSRSSALASKATGFPIAKIAAKLAVGYTLDEIKNDITRETYASFEPTIDYCVVKIPRW 361

Query: 448  AFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKEL-DWDW 506
             FEKFP +E +LTT MKSVGE MA+GRTF+E+FQK +RSLE G  G+G     ++     
Sbjct: 362  TFEKFPETEDILTTAMKSVGETMAIGRTFKEAFQKGMRSLEVGRMGFGFDGKDDMSSLHQ 421

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
            + L+  L  PN  R+  ++ A+++GM ++ IHELS ID WFL  FK+L++    +  +  
Sbjct: 422  DDLEQGLHRPNSKRISHVFEALRRGMSIERIHELSAIDPWFLHNFKQLVEKGSEIRARGF 481

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
            + + +D  Y VK+ GFSD Q+A  T ++E ++R+ R+ LG+ P+YK VDTCAAEFE+ TP
Sbjct: 482  AGLDRDFLYAVKQHGFSDVQLATLTGTSEDDIRQLRIELGLEPAYKLVDTCAAEFESYTP 541

Query: 627  YMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSN 686
            Y YS+Y+ E ES+ + +KK++ILGGGPNRIGQGIEFDYCC H SF+L+  G E+IM+NSN
Sbjct: 542  YYYSTYEQEDESSRSARKKIMILGGGPNRIGQGIEFDYCCVHASFALREIGVESIMVNSN 601

Query: 687  PETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHR 746
            PETVSTDYDTSD+LYFEPLT EDVLN+I+ E+P+G+IVQFGGQTPL L++P    L +  
Sbjct: 602  PETVSTDYDTSDKLYFEPLTREDVLNIIEREKPDGVIVQFGGQTPLNLAVP----LAKQG 657

Query: 747  LPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEIG 806
            +P         I GTSPD+ID AEDR+RF   +++L + QP  G A +  +ALA+A EIG
Sbjct: 658  VP---------IIGTSPDAIDRAEDRKRFQQFLQKLGLRQPANGTAHTLDEALAVAGEIG 708

Query: 807  YPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALAD 866
            YPVV+RPSYVLGGR M IVY ++ + +++        E PVL+D++L DAIE+DVDA++D
Sbjct: 709  YPVVMRPSYVLGGRDMRIVYNEQGIRSFMAIPGMSGGEHPVLLDQFLKDAIEVDVDAISD 768

Query: 867  SCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNC 926
                 VIGGIMEHIE+AG+HSGDSAC++P  T+S + ++ I++ T  +AK L V GLMN 
Sbjct: 769  GS-MTVIGGIMEHIEEAGIHSGDSACVLPPHTLSPAMIEEITAATKAMAKELGVIGLMNV 827

Query: 927  QYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPKH 986
            Q+A+     +Y+LE NPRASRTVPFVSKA G PLAK A  VM G SL  LGFT+E +  H
Sbjct: 828  QFAVQGQ-TLYVLEVNPRASRTVPFVSKATGVPLAKIATKVMLGMSLAQLGFTQEKVLHH 886

Query: 987  VSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVFL 1046
             +VKEAV PF++FQ  D LLGPEM+STGEVMGID    +A AK+Q+A   +LP SGT FL
Sbjct: 887  WAVKEAVFPFDRFQNVDTLLGPEMKSTGEVMGIDDDLGLALAKSQMATNAQLPQSGTAFL 946

Query: 1047 SLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVAN 1106
            S+    K  +  +A+   ++GF IV+T GTA  L   GIA   V K+ +GRPH  D + +
Sbjct: 947  SVRHGDKDAVLPVARKLRELGFTIVATRGTAAKLNENGIACNEVNKISQGRPHILDKIQD 1006

Query: 1107 GQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTVTMTA 1166
            GQ+Q ++ TS+G+   + D   +RR  L Y +P  TT++G  A   A+ S++  +V +  
Sbjct: 1007 GQVQWILNTSAGNRTTE-DSYIIRRAALDYHIPYTTTITGGQAMTRAMESMRHKSVGVKT 1065

Query: 1167 LQDF 1170
            +Q+F
Sbjct: 1066 IQEF 1069


>gi|302185421|ref|ZP_07262094.1| carbamoyl phosphate synthase large subunit [Pseudomonas syringae pv.
            syringae 642]
          Length = 1073

 Score = 1257 bits (3252), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 629/1088 (57%), Positives = 801/1088 (73%), Gaps = 28/1088 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILILGAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPAMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  + V +++EKERPDALLPTMGGQTALN A+ L   G LEK+GVE+IGA  D 
Sbjct: 63   ATYIEPIKWQTVAKIIEKERPDALLPTMGGQTALNCALDLEREGVLEKFGVEMIGANADT 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  F +AMK+IG+  P SGI ++++E  ++  ++G FP IIRP+FT+GGTGGGI
Sbjct: 123  IDKAEDRSRFDKAMKSIGLACPRSGIAHSMEEANAVLEKLG-FPCIIRPSFTMGGTGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEFE IC  GL  S T ++L+++SL+GWKEYE+EV+RD  DN +I+CSIEN DPMG
Sbjct: 182  AYNREEFEEICARGLDLSPTKELLIDESLIGWKEYEMEVVRDKKDNCIIVCSIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ LR+ S+A++REIGVE GGSNVQF + P  G ++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQILRNASLAVLREIGVETGGSNVQFGICPNTGRMVVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIA++AAKL+VGY+LD++ N+IT  KTPASFEPSIDYVVTK+PR
Sbjct: 302  PRVSRSSALASKATGFPIARVAAKLAVGYTLDELSNEITGGKTPASFEPSIDYVVTKLPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            FAFEKF  ++  LTTQMKSVGE MA+GRTFQES QKALR LE G  G       +LD   
Sbjct: 362  FAFEKFAKADARLTTQMKSVGEVMAIGRTFQESLQKALRGLEVGVCGLD----PKLDLSH 417

Query: 507  EQ----LKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLL 562
             +    LK  L VP  +R+  +  A + GM V+EI  ++ ID WFL Q ++LI  E+ + 
Sbjct: 418  PESMSTLKRELTVPGAERIWYVADAFRAGMTVEEIFAMNMIDPWFLVQIEDLIKDEEKIK 477

Query: 563  TQSVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFE 622
            T  +S++ +D  + +KR+GFSD ++A     TEK +R  R  L V P YKRVDTCAAEF 
Sbjct: 478  TLGLSSIDRDLMFRLKRKGFSDARLAKLLGVTEKNLRTHRHKLEVFPVYKRVDTCAAEFA 537

Query: 623  ANTPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIM 682
             +T Y+YS+Y+ ECE+ P+ + K++ILGGGPNRIGQGIEFDYCC H + +L+  GYETIM
Sbjct: 538  TDTAYLYSTYEEECEANPSTRDKIMILGGGPNRIGQGIEFDYCCVHAALALREDGYETIM 597

Query: 683  MNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYL 742
            +N NPETVSTDYDTSDRLYFEP+T+EDVL ++ +E+P+G+IVQ+GGQTPLKL+       
Sbjct: 598  VNCNPETVSTDYDTSDRLYFEPVTLEDVLEIVRVEKPKGVIVQYGGQTPLKLA------- 650

Query: 743  DEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIA 802
               R   A+G   V I GTSPD+ID AEDRERF  +++ L++ QP     +SE +A+  A
Sbjct: 651  ---RALEAAG---VPIIGTSPDAIDRAEDRERFQHMVERLNLRQPPNATVRSEDEAIRAA 704

Query: 803  KEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVD 862
             +IGYP+VVRPSYVLGGRAMEIVY ++ L  YL  AV+V  + PVL+D +L+ AIE+DVD
Sbjct: 705  AKIGYPLVVRPSYVLGGRAMEIVYQEDELKRYLREAVQVSNDSPVLLDHFLNCAIEMDVD 764

Query: 863  ALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCG 922
            A+ D   +VVIG IM+HIEQAGVHSGDSAC +P  ++ +   D +     K+A  L V G
Sbjct: 765  AVCDGT-DVVIGAIMQHIEQAGVHSGDSACSLPPYSLPAHIQDEMREQVKKMALELGVVG 823

Query: 923  LMNCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEV 982
            LMN Q A+    D+Y++E NPRASRTVPFVSK IG  LA  AA VM+GK+L +L FTKE+
Sbjct: 824  LMNVQLALQGE-DIYVIEVNPRASRTVPFVSKCIGVSLAMIAARVMAGKTLKELNFTKEI 882

Query: 983  IPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSG 1042
            IP   SVKEAV PF KF G D +LGPEM+STGEVMG+  +F  AFAKAQ+ A + LP  G
Sbjct: 883  IPNFYSVKEAVFPFAKFPGVDPILGPEMKSTGEVMGVGDTFGEAFAKAQMGASEVLPTGG 942

Query: 1043 TVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGD 1102
            T F+S+ D  KP +E +A+  +++GF+IV+T+GTA  +E  G+ V RV K+ EGRPH  D
Sbjct: 943  TAFISVRDDDKPLVEAVARDLINLGFEIVATAGTAKLIEAAGLKVRRVNKVTEGRPHVVD 1002

Query: 1103 MVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTV 1162
            M+ N ++ +++ T+ G      D   +RR  L +K+   TT++   A  EA++     TV
Sbjct: 1003 MIKNDEVTLIINTTEGRQ-SIADSYSIRRNALQHKIYCTTTIAAGEAICEALKFGPEKTV 1061

Query: 1163 TMTALQDF 1170
                LQD 
Sbjct: 1062 RR--LQDL 1067


>gi|241760250|ref|ZP_04758346.1| carbamoyl-phosphate synthase, large subunit [Neisseria flavescens
            SK114]
 gi|241319361|gb|EER55826.1| carbamoyl-phosphate synthase, large subunit [Neisseria flavescens
            SK114]
          Length = 1071

 Score = 1257 bits (3252), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 623/1070 (58%), Positives = 796/1070 (74%), Gaps = 22/1070 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTDL+ ILI+GAGPIVIGQACEFDYSG QACKAL+EEGY+VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDLKSILIIGAGPIVIGQACEFDYSGAQACKALREEGYKVILVNSNPATIMTDPEMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  + VE+++ KERPDA+LPTMGGQTALN A+ LA +G L KY VELIGA  DA
Sbjct: 63   VTYIEPIMWQTVEKIIAKERPDAILPTMGGQTALNCALDLARNGVLAKYNVELIGATEDA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  FK+AM+ IG+  P S + +T++E ++   ++G FP +IRP+FT+GG+GGGI
Sbjct: 123  IDKAEDRGRFKEAMEKIGLSCPKSFVCHTMNEALAAQEQVG-FPTLIRPSFTMGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYNK+EF AIC+ G  AS T ++L+E+S+LGWKEYE+EV+RD ADN +IICSIEN DPMG
Sbjct: 182  AYNKDEFLAICERGFDASPTHELLIEQSVLGWKEYEMEVVRDKADNCIIICSIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGV+ GGSNVQFAVNP +GE++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQIMRNASLAVLREIGVDTGGSNVQFAVNPENGEMIVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VG++LD++ NDIT  +TPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGFTLDELRNDITGGRTPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            FAFEKFP ++  LTTQMKSVGE MA+GRT QESFQKALR LE G  G+   +      D 
Sbjct: 362  FAFEKFPAADNRLTTQMKSVGEVMAMGRTIQESFQKALRGLETGLCGFNPRS-----SDK 416

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
             +++  L  P P+RM  +  A + G  ++EIHE+  ID WFL Q ++L+  EQ +    +
Sbjct: 417  AEIRRELANPGPERMLFVADAFRAGFTLEEIHEICAIDPWFLAQIEDLVKEEQQVSAGCL 476

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
             ++       +KR+GFSDK+IA      EKEVRE R +L + P YKRVDTCAAEF   T 
Sbjct: 477  QDLDFAALRRLKRKGFSDKRIAQLLGVKEKEVREHRYALKLHPVYKRVDTCAAEFATETA 536

Query: 627  YMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSN 686
            Y+YS+Y+ ECE+ P+ +KKV+ILGGGPNRIGQGIEFDYCC H + +L+ +G+ETIM+N N
Sbjct: 537  YLYSTYEEECEARPSDRKKVMILGGGPNRIGQGIEFDYCCVHAALALRESGFETIMVNCN 596

Query: 687  PETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHR 746
            PETVSTD+DTSDRLYFEPLT+EDVL ++  E P G+IV +GGQTPLKL+           
Sbjct: 597  PETVSTDFDTSDRLYFEPLTLEDVLEIVRTENPWGVIVHYGGQTPLKLA----------- 645

Query: 747  LPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEIG 806
              +A  +  V I GTS DSIDAAEDRERF  ++ +L + QP   IA +E +AL  A+EIG
Sbjct: 646  --NALVENGVNIIGTSADSIDAAEDRERFQKVLNDLGLRQPPNRIAHNEEEALVKAEEIG 703

Query: 807  YPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALAD 866
            YP+VVRPSYVLGGRAM++V++ E L  Y+  AV+V  + PVL+D +L++AIE+DVD ++D
Sbjct: 704  YPLVVRPSYVLGGRAMQVVHSAEELQKYMREAVQVSEDSPVLLDFFLNNAIEVDVDCVSD 763

Query: 867  SCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNC 926
               +VVIGGIM+H+EQAG+HSGDS C +P  ++S    D I   T  +A  L V GLMN 
Sbjct: 764  G-KDVVIGGIMQHVEQAGIHSGDSGCSLPPYSLSEEIQDEIRRQTKAMAYALGVVGLMNV 822

Query: 927  QYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPKH 986
            Q+A+   G V++LE NPRASRTVPFVSKA G PLAK  A  M+G SL + G  KEV+P  
Sbjct: 823  QFAV-QDGVVFVLEVNPRASRTVPFVSKATGVPLAKVGARCMAGISLQEQGVEKEVVPDF 881

Query: 987  VSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVFL 1046
             +VKEAV PF KF G D +LGPEMRSTGEVMG+  SF  A+ KAQ+ AG++L  +G +FL
Sbjct: 882  YAVKEAVFPFIKFPGVDTILGPEMRSTGEVMGVGASFGEAYYKAQLGAGERLNPTGKIFL 941

Query: 1047 SLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVAN 1106
            ++ D  KP + + A+ F  +G+ + +T GTA +L+  GI V+ V K+ EGRPH  D + N
Sbjct: 942  AVRDEDKPLIVKTAQNFQALGYGVCATRGTAEYLKEHGIIVQAVNKVQEGRPHIVDAIKN 1001

Query: 1107 GQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRS 1156
            G+I ++V T S  +    D   +RR  L  +VP  TT++G  A +E  +S
Sbjct: 1002 GEIALVVNTVSSSAQSIADSHSIRRTSLTQRVPQYTTIAGGEAMSEGAKS 1051


>gi|381198197|ref|ZP_09905536.1| carbamoyl-phosphate synthase, large subunit [Acinetobacter lwoffii
            WJ10621]
          Length = 1077

 Score = 1257 bits (3252), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 622/1075 (57%), Positives = 791/1075 (73%), Gaps = 24/1075 (2%)

Query: 86   LGKRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGL 145
            + KRTD++ ILI+GAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +
Sbjct: 1    MAKRTDIKSILIIGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPAM 60

Query: 146  ADRTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKL 205
            AD TYI P+T + V Q++EKERPDA+LPTMGGQTALN A+AL  +G LEKY VELIGA  
Sbjct: 61   ADATYIEPITWQTVAQIIEKERPDAVLPTMGGQTALNCALALDANGILEKYNVELIGATK 120

Query: 206  DAIKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGG 265
            +AI+KAEDR LF +AM+ IG++ P + I   ++E + I    G FP+IIRP+FT+GG+GG
Sbjct: 121  EAIEKAEDRKLFDEAMRKIGLECPKAAIAENMEEALEIQARFG-FPVIIRPSFTMGGSGG 179

Query: 266  GIAYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDP 325
            GIAYNKEEF  IC+ G   S T Q+L+++SL+GWKEYE+EV+RD  DN +I+C+IEN DP
Sbjct: 180  GIAYNKEEFLEICERGFDLSPTKQLLIDESLIGWKEYEMEVVRDKNDNCIIVCAIENFDP 239

Query: 326  MGVHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIE 385
            MGVHTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGVE GGSNVQF + P  G +++IE
Sbjct: 240  MGVHTGDSITVAPAQTLTDKEYQLMRNASLAVLREIGVETGGSNVQFGICPDTGRMVIIE 299

Query: 386  MNPRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITK-KTPASFEPSIDYVVTKI 444
            MNPRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT   TPASFEP+IDYVVTKI
Sbjct: 300  MNPRVSRSSALASKATGFPIAKIAAKLAVGYTLDELKNDITGGTTPASFEPAIDYVVTKI 359

Query: 445  PRFAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDW 504
            PRF FEKFP ++  LTTQMKSVGE MA+GR FQES  KALR LE G  G+        + 
Sbjct: 360  PRFNFEKFPQADATLTTQMKSVGEVMAIGRNFQESVNKALRGLEVGACGFDEKIAVGTEG 419

Query: 505  DWEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQ 564
              E++   L+VP P+R+  +  A + G  ++++ + + IDKWFL Q +++I  E  + T 
Sbjct: 420  AKEKILVELKVPGPERIWYVADAFRHGFTLEDVFQATKIDKWFLIQIEDIIKTENEIKTL 479

Query: 565  SVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEAN 624
               ++  D+    KR+G SD +IA     ++K+ R+ R +LGV P YKRVDTCAAEFE++
Sbjct: 480  GFGDLNADNIRSFKRKGLSDLRIANLMGISQKQFRKHRWNLGVTPVYKRVDTCAAEFESD 539

Query: 625  TPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMN 684
            T YMYS+YD ECES P+ K K++++GGGPNRIGQGIEFDYCC H + +++  GYETIM+N
Sbjct: 540  TAYMYSTYDDECESNPSDKDKIMVIGGGPNRIGQGIEFDYCCVHAALAMREDGYETIMVN 599

Query: 685  SNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDE 744
             NPETVSTDYDTSDRLYFEP+T+EDVL ++  E+P+GIIVQ+GGQTPLKL+    + L+E
Sbjct: 600  CNPETVSTDYDTSDRLYFEPITLEDVLEIVRTEKPKGIIVQYGGQTPLKLA----RALEE 655

Query: 745  HRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKE 804
               P         I GTSPD+ID AEDRERF  +I+ L + QP   I KS  + +A A +
Sbjct: 656  AGAP---------IIGTSPDAIDRAEDRERFQQMIQRLQLRQPNNSIVKSAEEGMAEASK 706

Query: 805  IGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDAL 864
            +GYP+VVRPSYVLGGRAMEIVY DE L  YL +AV+   E PVL+D++L DAIE+DVD +
Sbjct: 707  VGYPLVVRPSYVLGGRAMEIVYNDEELKRYLRDAVQASNEAPVLLDRFLDDAIEVDVDCV 766

Query: 865  ADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLM 924
            +D   +VVIGGIM+HIEQAG+HSGDSAC IP  ++S    D +   T+ +AK L V GLM
Sbjct: 767  SDG-KDVVIGGIMQHIEQAGIHSGDSACSIPPYSLSVEIQDEMRRQTVAMAKELGVVGLM 825

Query: 925  NCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIP 984
            N Q+A+    DVY+LE NPRASRTVPFVSK IG  LAK AA  M+G+SL   GFTKE+IP
Sbjct: 826  NVQFAVKGE-DVYILEVNPRASRTVPFVSKCIGESLAKVAARCMAGQSLESQGFTKEIIP 884

Query: 985  KHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQK---LPLS 1041
             H SVKEAV PF KF G D +LGPEM+STGEVMG+  +F  AF KA + + ++   LP  
Sbjct: 885  THFSVKEAVFPFNKFPGVDPILGPEMKSTGEVMGVGKTFGEAFYKAVLGSNERVPGLPTE 944

Query: 1042 GTV---FLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRP 1098
            G V   F+S+ D  KP    IAK  +  GFK+++T GT  F++  GI  ERV K+ EGRP
Sbjct: 945  GEVKHAFISVRDSDKPRAVGIAKQLVGFGFKVLATGGTYEFIKAAGIECERVNKVTEGRP 1004

Query: 1099 HAGDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEA 1153
            +  D + NG++ +++ T+ G    Q D   +RR  L  KV   TT++GA A  +A
Sbjct: 1005 NIVDRLKNGEVHLIINTTEGKQAQQ-DSFSIRRSALQAKVYNTTTLNGADAVCQA 1058


>gi|389683223|ref|ZP_10174555.1| carbamoyl-phosphate synthase, large subunit [Pseudomonas chlororaphis
            O6]
 gi|388552736|gb|EIM15997.1| carbamoyl-phosphate synthase, large subunit [Pseudomonas chlororaphis
            O6]
          Length = 1073

 Score = 1257 bits (3252), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 631/1088 (57%), Positives = 800/1088 (73%), Gaps = 28/1088 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILILGAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPAMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  + V +++EKERPDALLPTMGGQTALN A+ L   G LEK+GVE+IGA  D 
Sbjct: 63   ATYIEPIKWQTVAKIIEKERPDALLPTMGGQTALNCALDLEREGVLEKFGVEMIGANADT 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  F  AMK IG++ P SGI +++DE  ++  ++G FP IIRP+FT+GGTGGGI
Sbjct: 123  IDKAEDRSRFDTAMKAIGLECPRSGIAHSMDEANAVLEKLG-FPCIIRPSFTMGGTGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEFE IC  GL  S T ++L+++SL+GWKEYE+EV+RD  DN +I+CSIEN DPMG
Sbjct: 182  AYNREEFEEICARGLDLSPTKELLIDESLIGWKEYEMEVVRDKKDNCIIVCSIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ LR+ S+A++REIGVE GGSNVQF + P  G ++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQILRNASLAVLREIGVETGGSNVQFGICPNTGRMVVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT  KTPASFEPSIDYVVTK+PR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGYTLDELSNDITGGKTPASFEPSIDYVVTKLPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSG----WGCSNVKEL 502
            FAFEKF  ++  LTTQMKSVGE MA+GRTFQES QKALR LE G  G       SN + +
Sbjct: 362  FAFEKFAKADARLTTQMKSVGEVMAIGRTFQESLQKALRGLEVGVCGLDPKLDLSNPESM 421

Query: 503  DWDWEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLL 562
            +     LK  L VP  +R+  +  A + GM V++I  ++ ID WFL Q ++LI  E+ + 
Sbjct: 422  NV----LKRELTVPGAERIWYVADAFRAGMTVEQIFGMNMIDPWFLVQIEDLIKEEEKVK 477

Query: 563  TQSVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFE 622
            T  +S + +D  + +KR+GFSD+++A     TEK +R  R  L V P YKRVDTCAAEF 
Sbjct: 478  TLGLSAIDRDLMFRLKRKGFSDQRLAKLLGVTEKNLRTHRHKLEVFPVYKRVDTCAAEFA 537

Query: 623  ANTPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIM 682
             +T Y+YS+Y+ ECE+AP+ + K++ILGGGPNRIGQGIEFDYCC H + +L+  GYETIM
Sbjct: 538  TDTAYLYSTYEEECEAAPSGRDKIMILGGGPNRIGQGIEFDYCCVHAALALRDDGYETIM 597

Query: 683  MNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYL 742
            +N NPETVSTDYDTSDRLYFEP+T+EDVL ++ +E+P+G+IVQ+GGQTPLKL+       
Sbjct: 598  VNCNPETVSTDYDTSDRLYFEPVTLEDVLEIVRVEKPKGVIVQYGGQTPLKLA------- 650

Query: 743  DEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIA 802
               R   A+G   V I GTSPD+ID AEDRERF  +++ L++ QP     +SE +A+  A
Sbjct: 651  ---RALEAAG---VPIIGTSPDAIDRAEDRERFQQMVERLNLRQPPNATVRSEDEAIRAA 704

Query: 803  KEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVD 862
             +IGYP+VVRPSYVLGGRAMEIVY +E L  YL  AV+V  + PVL+D +L+ AIE+DVD
Sbjct: 705  AKIGYPLVVRPSYVLGGRAMEIVYEEEELKRYLREAVQVSNDSPVLLDHFLNCAIEMDVD 764

Query: 863  ALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCG 922
            A+ D   +VVIG IM+HIEQAGVHSGDSAC +P  ++     D +     K+A  L V G
Sbjct: 765  AVCDG-KDVVIGAIMQHIEQAGVHSGDSACSLPPYSLPVHIQDEMREQVKKMALELGVVG 823

Query: 923  LMNCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEV 982
            LMN Q A+     +Y++E NPRASRTVPFVSK IG  LA  AA VM+GK+L +LGFTKE+
Sbjct: 824  LMNVQLALQGE-QIYVIEVNPRASRTVPFVSKCIGVSLAMIAARVMAGKTLKELGFTKEI 882

Query: 983  IPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSG 1042
            IP   SVKEAV PF KF G D +LGPEM+STGEVMG+  +F  AFAKAQ+ A + LP  G
Sbjct: 883  IPNFYSVKEAVFPFAKFPGVDPILGPEMKSTGEVMGVGDTFGEAFAKAQMGASEVLPTGG 942

Query: 1043 TVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGD 1102
            T F+S+ D  KP +  +A+  +++GF++V+T+GTA  +E  G+ V RV K+ EGRPH  D
Sbjct: 943  TAFISVRDDDKPLVAGVARDLINLGFEVVATAGTAKLIEAAGLKVRRVNKVTEGRPHVVD 1002

Query: 1103 MVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTV 1162
            M+ N ++ +++ T+ G      D   +RR  L +K+   TT++   A  EA++     TV
Sbjct: 1003 MIKNDEVTLIINTTEGRQ-SIADSYSIRRNALQHKIYCTTTIAAGEAICEALKFGPEKTV 1061

Query: 1163 TMTALQDF 1170
                LQD 
Sbjct: 1062 RR--LQDL 1067


>gi|87121706|ref|ZP_01077593.1| carbamoylphosphate synthetase large subunit [Marinomonas sp. MED121]
 gi|86162957|gb|EAQ64235.1| carbamoylphosphate synthetase large subunit [Marinomonas sp. MED121]
          Length = 1071

 Score = 1256 bits (3251), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 622/1068 (58%), Positives = 793/1068 (74%), Gaps = 18/1068 (1%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ +LILGAGPI+IGQACEFDYSG QACKAL+EEG  VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIKSVLILGAGPIIIGQACEFDYSGAQACKALREEGLRVILVNSNPATIMTDPAMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  + V +++EKERPDA+LPTMGGQTALN A+ L   G L ++ VE+IGA  DA
Sbjct: 63   STYIEPIEWKTVAKIIEKERPDAVLPTMGGQTALNCALDLERHGVLAEFDVEMIGATADA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR+ F QAMK IG++ P +GI + ++E   +  E+G FP IIRP+FT+GGTGGGI
Sbjct: 123  IDKAEDRNRFDQAMKAIGLECPRAGIAHNMEEAYGVQREVG-FPCIIRPSFTMGGTGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN EEFE IC  GL  S T+++L+++SL+GWKEYE+EV+RD  DN +I+C+IEN D MG
Sbjct: 182  AYNTEEFEEICTRGLDLSPTNELLIDESLIGWKEYEMEVVRDKKDNCIIVCAIENFDAMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGVE GGSNVQF ++P  G ++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQIMRNASLAVLREIGVETGGSNVQFGMDPKTGRLVVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITK-KTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL++GY+LD++ NDIT  +TPASFEP+IDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKIAAKLAIGYTLDELQNDITGGRTPASFEPAIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            F FEKFP +   LTTQMKSVGE MA+GRTFQES QKALR LE G  G+        +   
Sbjct: 362  FTFEKFPTANDRLTTQMKSVGEVMAIGRTFQESVQKALRGLEVGADGFNPQLNFAEENSK 421

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
            ++L + L+ P  DR+  I  A + GM VDE++EL+ +D WFL Q ++LI  E  L    +
Sbjct: 422  DKLIHELKSPGADRIWYIGDAFRMGMSVDELYELTGVDHWFLVQIEDLIKEETGLAKAGL 481

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
            +++  D    +KR+GFSD ++A     TEK +RE+R  + V P YKRVDTCAAEF  +T 
Sbjct: 482  ADLDYDYIRRLKRKGFSDARLAQLMDVTEKSLRERRYLMNVHPVYKRVDTCAAEFATDTA 541

Query: 627  YMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSN 686
            Y+YS+Y+ ECE+ P+ K KV+ILGGGPNRIGQGIEFDYCC H + +L+  G+ETIM+N N
Sbjct: 542  YLYSTYEDECEAEPSNKDKVVILGGGPNRIGQGIEFDYCCVHAALALRDNGFETIMVNCN 601

Query: 687  PETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHR 746
            PETVSTDYDTSDRLYFEP+T+EDVL ++  E+P+G+IVQFGGQTPLK++          R
Sbjct: 602  PETVSTDYDTSDRLYFEPVTLEDVLEIVRKEKPKGVIVQFGGQTPLKIA----------R 651

Query: 747  LPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEIG 806
               A G   V I GTSP++ID AEDRERF ++I+ L  +QP     +S   AL  A EIG
Sbjct: 652  ALEAEG---VPIIGTSPEAIDRAEDRERFQSMIQRLGYKQPNNATVRSTDQALIKAAEIG 708

Query: 807  YPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALAD 866
            +P+VVRPSYVLGGRAMEIVY +  L  Y+  AV+V  + PVL+D +L+ AIEID+D ++D
Sbjct: 709  FPLVVRPSYVLGGRAMEIVYNESELTRYMTTAVKVSNDSPVLLDHFLNAAIEIDIDCISD 768

Query: 867  SCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNC 926
                VVIGGIM+HIEQAGVHSGDSAC +P  +++ +  D I     K+A  L V GLMN 
Sbjct: 769  G-KQVVIGGIMQHIEQAGVHSGDSACALPPHSLTQAQQDDIREMIAKMALELGVIGLMNT 827

Query: 927  QYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPKH 986
            Q AI   G++Y++E NPRASRTVPFVSK IG  LA+ AALVMSGK+L +L FTKE+IP +
Sbjct: 828  QLAI-QDGEIYVIEVNPRASRTVPFVSKCIGRSLAQVAALVMSGKTLAELEFTKEIIPSY 886

Query: 987  VSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVFL 1046
            VSVKEAV PF KFQG D +LGPEM+STGEVMG+  +F  AF KA +  G  LP  GT F+
Sbjct: 887  VSVKEAVFPFNKFQGVDPILGPEMKSTGEVMGVGDTFAEAFGKAVLGGGTVLPTGGTAFV 946

Query: 1047 SLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVAN 1106
            S+ D+ KP L  +A+  ++ GF++V+TSGTA FL  +G+ V ++ K++EGRPH  DM+ N
Sbjct: 947  SVRDMDKPKLVSVAQRLIENGFELVATSGTASFLTEQGVVVRKINKVNEGRPHIVDMLKN 1006

Query: 1107 GQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAI 1154
            G+I  +V T+ G +    D   +RR  L  KV   TT++GA A + A+
Sbjct: 1007 GEIDYIVNTTEG-TQAIADSSVIRRTALQRKVCYTTTLTGAEATSYAL 1053


>gi|409405169|ref|ZP_11253631.1| carbamoyl-phosphate synthase large subunit [Herbaspirillum sp. GW103]
 gi|386433718|gb|EIJ46543.1| carbamoyl-phosphate synthase large subunit [Herbaspirillum sp. GW103]
          Length = 1077

 Score = 1256 bits (3251), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 638/1081 (59%), Positives = 810/1081 (74%), Gaps = 29/1081 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILI+GAGPI+IGQACEFDYSG QACKAL+EEG++VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIKSILIIGAGPIIIGQACEFDYSGAQACKALREEGFKVILVNSNPATIMTDPEMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+T + VE+++ KE+PDA+LPTMGGQTALN A+ L  +G L+KY VELIGA  +A
Sbjct: 63   ATYIEPITWQAVERIIAKEKPDAILPTMGGQTALNCALDLHRNGVLDKYKVELIGATPEA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  FKQAM  IG+ +  SG+ +T++E  ++   IG FP+IIRP+FT+GGTGGGI
Sbjct: 123  IDKAEDRSKFKQAMTKIGLGSARSGVSHTMEESWAVQKTIG-FPVIIRPSFTMGGTGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN EEFE ICK GL AS TS++L+E+SL+GWKEYE+EV+RD ADN +I+CSIEN+DPMG
Sbjct: 182  AYNAEEFETICKRGLEASPTSELLIEESLIGWKEYEMEVVRDKADNCIIVCSIENLDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGV+ GGSNVQF+VNP DG ++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQIMRNASLAVLREIGVDTGGSNVQFSVNPADGRMIVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VG++LD++ N+IT   TPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKIAAKLAVGFTLDELRNEITGGATPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            F FEKFP ++  LTTQMKSVGE MA+GRTFQESFQKALR LE G  G     + E   D 
Sbjct: 362  FTFEKFPQADKHLTTQMKSVGEVMAIGRTFQESFQKALRGLEVGVDG-----MNEKTTDR 416

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQ-S 565
            E ++  L  P PDR+  +  A  +G  ++E+H L+ ID WFL+Q KE++D+E +L    +
Sbjct: 417  ELIEKELGEPGPDRIWYVGDAFAQGFSLEEVHGLTHIDPWFLSQIKEIVDIELWLEKDVA 476

Query: 566  VSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANT 625
            + ++ K   +++K++GFSD+++A   K+T+  VRE+R  LGV P +KRVDTCA EF  +T
Sbjct: 477  LESLDKATLFQLKQKGFSDRRLAKLLKTTDTAVREQRKKLGVRPVFKRVDTCAGEFSTDT 536

Query: 626  PYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNS 685
             YMYS+YD ECES PT KKK+++LGGGPNRIGQGIEFDYCC H + +++  GYETIM+N 
Sbjct: 537  AYMYSTYDEECESNPTDKKKIMVLGGGPNRIGQGIEFDYCCVHAALAMRDDGYETIMVNC 596

Query: 686  NPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEH 745
            NPETVSTDYDTSDRLYFEP+T+EDVL +++ E+P G+IVQ+GGQTPLKL+L +       
Sbjct: 597  NPETVSTDYDTSDRLYFEPVTLEDVLEIVEKEKPVGVIVQYGGQTPLKLALDLE------ 650

Query: 746  RLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEI 805
                A+G   V I GTSPD IDAAEDRERF  ++++L + QP    A++EADAL +A+EI
Sbjct: 651  ----ANG---VPIVGTSPDMIDAAEDRERFQKLLQDLGLRQPPNRTARTEADALQLAQEI 703

Query: 806  GYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALA 865
            GYP+VVRPSYVLGGRAMEIV+    L  Y+  AV+V  + PVL+D++L+DAIE+DVD L+
Sbjct: 704  GYPLVVRPSYVLGGRAMEIVHEQRDLERYMREAVKVSHDSPVLLDRFLNDAIEVDVDCLS 763

Query: 866  DSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMN 925
            D      IGG+MEHIEQAGVHSGDSAC +P  ++S   ++ +   T  +AK LNV GLMN
Sbjct: 764  DG-ERTFIGGVMEHIEQAGVHSGDSACSLPPYSLSKETIEELKRQTALMAKGLNVVGLMN 822

Query: 926  CQYAIT-------TSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGF 978
             Q+AI        T   V++LE NPRASRTVPFVSKA G  LAK AA  M G+SL+  G 
Sbjct: 823  VQFAIQQNEVDGKTVDTVFVLEVNPRASRTVPFVSKATGLQLAKIAARCMVGQSLDSQGI 882

Query: 979  TKEVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKL 1038
              EV+P + SVKEAV PF KF G D +LGPEM+STGEVMG+  +F  AF K+Q+ AG KL
Sbjct: 883  KNEVVPPYYSVKEAVFPFVKFPGVDTILGPEMKSTGEVMGVGKTFGEAFVKSQMGAGVKL 942

Query: 1039 PLSGTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRP 1098
            P SG VFLS+ +  KP   ++A+  + +GF IV+T GTA  +   GI V  V K+ EGRP
Sbjct: 943  PKSGKVFLSVKNSDKPRAVQVARDLVALGFSIVATKGTAAAISAAGIPVTTVNKVVEGRP 1002

Query: 1099 HAGDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLK 1158
            H  DMV N +I ++V T         D   +R   LA +V   TT++GA A  E +R L 
Sbjct: 1003 HIVDMVKNNEITLVVNTVEEKRNAIADSGAIRTSALAARVTTFTTIAGAEAAVEGMRHLD 1062

Query: 1159 S 1159
            +
Sbjct: 1063 A 1063


>gi|407697686|ref|YP_006822474.1| carbamoyl-phosphate synthase large subunit [Alcanivorax dieselolei
            B5]
 gi|407255024|gb|AFT72131.1| Carbamoyl-phosphate synthase large chain [Alcanivorax dieselolei B5]
          Length = 1071

 Score = 1256 bits (3251), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 625/1072 (58%), Positives = 790/1072 (73%), Gaps = 26/1072 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILI+GAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIKSILIIGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPAMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+T E V +++EKERPDALLPTMGGQTALN A+ L   G LEK+ VE+IGA  D 
Sbjct: 63   ATYIEPITWETVAKIIEKERPDALLPTMGGQTALNCALDLERHGVLEKFAVEMIGANADT 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAE+RD F +AMK IG++ P + + +T+DE   I  E+G FP IIRP+FT+GG+GGG+
Sbjct: 123  IDKAENRDRFDKAMKNIGLECPRARVAHTMDEAWEIQAELG-FPSIIRPSFTMGGSGGGV 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYNKEEFE IC  G   S T ++L+++SLLGWKEYE+EV+RD  DN +I+C+IEN DPMG
Sbjct: 182  AYNKEEFEEICTRGFELSPTHELLIDESLLGWKEYEMEVVRDRNDNCIIVCAIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ +RD S+A++REIGVE GGSNVQF + P  G ++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQVMRDASLAVLREIGVETGGSNVQFGMCPDTGRMVVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITK-KTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT   TPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGYTLDELQNDITGGATPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            F FEKF  ++P+LTTQMKSVGE MA+GR FQES  KALR LE    G+      ++D D 
Sbjct: 362  FNFEKFADADPVLTTQMKSVGEVMAIGRNFQESLHKALRGLEVDSVGFD----PKVDLDA 417

Query: 507  ----EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLL 562
                E++   L  P P+R+  I  A + G+ VD+++ L+ ID+WFL Q  +LI  E  L+
Sbjct: 418  PDAAERIAQQLSTPGPERIWVIGDAFRSGLGVDDVYALTKIDRWFLVQVADLIAEESRLV 477

Query: 563  TQSVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFE 622
              + +++++D  Y +KR+GFSD ++A      E +VR KR  LGV P +KRVDTCAAEF 
Sbjct: 478  DFTFTDLSRDTLYRLKRKGFSDARLAQLLGVREADVRSKRHDLGVRPVFKRVDTCAAEFP 537

Query: 623  ANTPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIM 682
             +T YMYSSYD ECES P+ + K++++GGGPNRIGQGIEFDYCC H +F+++  GYETIM
Sbjct: 538  TSTAYMYSSYDEECESNPSDRDKIMVIGGGPNRIGQGIEFDYCCVHAAFAMKDDGYETIM 597

Query: 683  MNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYL 742
            +N NPETVSTDYDTSDRLYFEP+T+EDVL + D+ERP+G+IVQ+GGQTPLKL+       
Sbjct: 598  VNCNPETVSTDYDTSDRLYFEPVTLEDVLAIADVERPKGVIVQYGGQTPLKLA------- 650

Query: 743  DEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIA 802
               R   A+G   V I GTSPD+ID AEDRERF  ++ +L ++QP    A+S  + L +A
Sbjct: 651  ---RALQAAG---VPIIGTSPDAIDEAEDRERFQQMVNKLGLKQPPNRTARSLEEGLKLA 704

Query: 803  KEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVD 862
            +EIGYP+VVRPSYVLGGRAMEIVY +  L +Y+ NAV V  + PVL+D++L DAIE+DVD
Sbjct: 705  EEIGYPLVVRPSYVLGGRAMEIVYNEAELRSYMNNAVSVSNDSPVLLDRFLDDAIEVDVD 764

Query: 863  ALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCG 922
            A+ D   +VVIGGIM+HIEQAGVHSGDSAC +P  ++  S  D +   T  +A  L V G
Sbjct: 765  AICDGT-DVVIGGIMQHIEQAGVHSGDSACSLPPYSLDDSVQDVMRQQTAAMALELGVVG 823

Query: 923  LMNCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEV 982
            LMN Q+A+    DVY+LE NPRASRTVP+VSK IG  LAK AA  M G SL D  FT EV
Sbjct: 824  LMNVQFAVKGE-DVYVLEVNPRASRTVPYVSKCIGVSLAKVAARCMVGISLKDQDFTSEV 882

Query: 983  IPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSG 1042
             P+H  VKEAV PF KF   D +LGPEM+STGEVMGI  SF  AF KA + AG++LP  G
Sbjct: 883  TPRHYFVKEAVFPFAKFPKVDPILGPEMKSTGEVMGIGSSFAEAFGKASLGAGERLPQEG 942

Query: 1043 TVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGD 1102
            T F+S+ ++ KP    +A+   ++GF++V+T GTA  +   G+ V  + K+ EGRPH  D
Sbjct: 943  TAFISVREVDKPAAVDVARTLSELGFELVATRGTAAVIAEAGLPVTPINKVLEGRPHIVD 1002

Query: 1103 MVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAI 1154
            M+ N  + ++V T+ G    + D   +RR  L +KV   TT++ A A  +A+
Sbjct: 1003 MIKNDGVALIVNTTEGKQAIR-DSFAIRRSALQHKVFYTTTITAAQAVCQAM 1053


>gi|422300041|ref|ZP_16387584.1| carbamoyl-phosphate synthase, large subunit [Pseudomonas avellanae
            BPIC 631]
 gi|422658017|ref|ZP_16720454.1| carbamoyl phosphate synthase large subunit [Pseudomonas syringae pv.
            lachrymans str. M302278]
 gi|331016637|gb|EGH96693.1| carbamoyl phosphate synthase large subunit [Pseudomonas syringae pv.
            lachrymans str. M302278]
 gi|407987882|gb|EKG30560.1| carbamoyl-phosphate synthase, large subunit [Pseudomonas avellanae
            BPIC 631]
          Length = 1073

 Score = 1256 bits (3251), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 629/1088 (57%), Positives = 800/1088 (73%), Gaps = 28/1088 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILILGAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPAMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  + V +++EKERPDALLPTMGGQTALN A+ L   G LEK+GVE+IGA  D 
Sbjct: 63   ATYIEPIKWQTVAKIIEKERPDALLPTMGGQTALNCALDLEREGVLEKFGVEMIGANADT 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  F +AMK+IG+  P SGI ++++E  ++  ++G FP IIRP+FT+GGTGGGI
Sbjct: 123  IDKAEDRSRFDKAMKSIGLACPRSGIAHSMEEASAVLEKLG-FPCIIRPSFTMGGTGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEFE IC  GL  S T ++L+++SL+GWKEYE+EV+RD  DN +I+CSIEN DPMG
Sbjct: 182  AYNREEFEEICARGLDLSPTKELLIDESLIGWKEYEMEVVRDKKDNCIIVCSIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ LR+ S+A++REIGVE GGSNVQF + P  G ++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQILRNASLAVLREIGVETGGSNVQFGICPDTGRMVVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIA++AAKL+VGY+LD++ N+IT  KTPASFEPSIDYVVTK+PR
Sbjct: 302  PRVSRSSALASKATGFPIARVAAKLAVGYTLDELSNEITGGKTPASFEPSIDYVVTKLPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            FAFEKF  ++  LTTQMKSVGE MA+GRTFQES QKALR LE G  G       +LD   
Sbjct: 362  FAFEKFAKADARLTTQMKSVGEVMAIGRTFQESLQKALRGLEVGVCGLD----PKLDLSH 417

Query: 507  EQ----LKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLL 562
             +    LK  L VP  +R+  +  A + GM V+EI  ++ ID WFL Q ++L+  E+ + 
Sbjct: 418  PESMSTLKRELTVPGAERIWYVADAFRAGMTVEEIFAMNMIDPWFLVQIEDLVKDEEKIK 477

Query: 563  TQSVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFE 622
            T  +S + +D  Y +KR+GFSD ++A     TEK +R  R  L V P YKRVDTCAAEF 
Sbjct: 478  TLGLSAIDRDLMYRLKRKGFSDARLAKLVGVTEKNLRTHRHKLDVFPVYKRVDTCAAEFA 537

Query: 623  ANTPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIM 682
             +T Y+YS+Y+ ECE+ P+ + K++ILGGGPNRIGQGIEFDYCC H + +L+  GYETIM
Sbjct: 538  TDTAYLYSTYEEECEANPSTRDKIMILGGGPNRIGQGIEFDYCCVHAALALREDGYETIM 597

Query: 683  MNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYL 742
            +N NPETVSTDYDTSDRLYFEP+T+EDVL ++ +E+P+G+IVQ+GGQTPLKL+       
Sbjct: 598  VNCNPETVSTDYDTSDRLYFEPVTLEDVLEIVRVEKPKGVIVQYGGQTPLKLA------- 650

Query: 743  DEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIA 802
               R   A+G   V I GTSPD+ID AEDRERF  +++ L++ QP     +SE +A+  A
Sbjct: 651  ---RALEAAG---VPIIGTSPDAIDRAEDRERFQQMVERLNLRQPPNATVRSEDEAIRAA 704

Query: 803  KEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVD 862
             +IGYP+VVRPSYVLGGRAMEIVY ++ L  YL  AV+V  + PVL+D +L+ AIE+DVD
Sbjct: 705  AKIGYPLVVRPSYVLGGRAMEIVYQEDELKRYLREAVQVSNDSPVLLDHFLNCAIEMDVD 764

Query: 863  ALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCG 922
            A+ D   +VVIG IM+HIEQAGVHSGDSAC +P  ++ +   D +     K+A  L V G
Sbjct: 765  AVCDGT-DVVIGAIMQHIEQAGVHSGDSACSLPPYSLPAHIQDEMREQVKKMALELGVVG 823

Query: 923  LMNCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEV 982
            LMN Q A+    D+Y++E NPRASRTVPFVSK IG  LA  AA VM+GK+L +L FTKE+
Sbjct: 824  LMNVQLALQGE-DIYVIEVNPRASRTVPFVSKCIGVSLAMIAARVMAGKTLKELNFTKEI 882

Query: 983  IPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSG 1042
            IP   SVKEAV PF KF G D +LGPEM+STGEVMG+  +F  AFAKAQ+ A + LP  G
Sbjct: 883  IPNFYSVKEAVFPFAKFPGVDPILGPEMKSTGEVMGVGDTFGEAFAKAQMGASEVLPTGG 942

Query: 1043 TVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGD 1102
            T F+S+ D  KP +E +A+  +++GF+IV+T+GTA  +E  G+ V RV K+ EGRPH  D
Sbjct: 943  TAFISVRDDDKPLVEAVARDLINLGFEIVATAGTAKLIEAAGLKVRRVNKVTEGRPHVVD 1002

Query: 1103 MVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTV 1162
            M+ N ++ +++ T+ G      D   +RR  L +K+   TT++   A  EA++     TV
Sbjct: 1003 MIKNDEVTLIINTTEGRQ-SIADSYSIRRNALQHKIYCTTTIAAGEAICEALKFGPEKTV 1061

Query: 1163 TMTALQDF 1170
                LQD 
Sbjct: 1062 RR--LQDL 1067


>gi|192362421|ref|YP_001983145.1| carbamoyl phosphate synthase large subunit [Cellvibrio japonicus
            Ueda107]
 gi|190688586|gb|ACE86264.1| carbamoyl-phosphate synthase, large subunit [Cellvibrio japonicus
            Ueda107]
          Length = 1072

 Score = 1256 bits (3251), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 628/1088 (57%), Positives = 801/1088 (73%), Gaps = 28/1088 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD+  ILILGAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDINSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPAMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  + V +++EKERPD +LPTMGGQTALN A+ALA++G LEKY VELIGAK +A
Sbjct: 63   ATYIEPIEWQTVAKIIEKERPDVILPTMGGQTALNCALALAKNGVLEKYNVELIGAKEEA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR+LF QAMK IG++   + I ++++E   +  E G FP IIRP+FT+GG+GGGI
Sbjct: 123  INKAEDRNLFDQAMKRIGLECARARIVHSMEEAKEVPKEFG-FPCIIRPSFTMGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN EEFE IC  GL  S T+++L+++SLLGWKEYE+EV+RD  DN +I+CSIEN DPMG
Sbjct: 182  AYNWEEFEEICARGLDLSPTNELLIDESLLGWKEYEMEVVRDKNDNCIIVCSIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGVE GGSNVQFAVNPVDG ++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQIMRNASVAVLREIGVETGGSNVQFAVNPVDGRMVVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITK-KTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ N+IT   TPASFEPSIDYVVTK+PR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGYTLDELQNEITGGATPASFEPSIDYVVTKVPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            F FEKF  ++  LTTQMKSVGE MA+GRTFQES QKALR LE G +G+      ++D+  
Sbjct: 362  FTFEKFGDADARLTTQMKSVGEVMAIGRTFQESLQKALRGLEVGSAGFE----SKVDYTT 417

Query: 507  EQ----LKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLL 562
            E+    ++  L     +R+  +  A + GM V++   LS ID WFL Q KELID+EQ L 
Sbjct: 418  EEGAAKVRRELTTAGAERIWYVGDAFRMGMSVNDAFNLSKIDPWFLVQVKELIDIEQSLR 477

Query: 563  TQSVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFE 622
             +S++ +  D  Y +KR+GFSDK++A    +TEK VR +R SL + P YKRVDTCAAEF 
Sbjct: 478  GKSLNQLDADQLYRLKRKGFSDKRLALLLATTEKAVRTQRQSLDIRPVYKRVDTCAAEFA 537

Query: 623  ANTPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIM 682
             +T YMYS+Y+ ECE+ P+ KKK+L++GGGPNRIGQGIEFDYCC H + +++  GYETIM
Sbjct: 538  TSTAYMYSTYEEECEANPSDKKKILVIGGGPNRIGQGIEFDYCCVHAALAMREDGYETIM 597

Query: 683  MNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYL 742
            +N NPETVSTDYDTSDRL+FEP+T+EDVL ++  E+P G+IVQFGGQTPLKL+       
Sbjct: 598  VNCNPETVSTDYDTSDRLFFEPVTLEDVLEIVHKEKPAGVIVQFGGQTPLKLA------- 650

Query: 743  DEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIA 802
               R   A G   V I GTSPD+ID AEDRERF  +I++L + QP   I +S  +AL  A
Sbjct: 651  ---RALEAEG---VPIIGTSPDAIDKAEDRERFQQMIEKLGLLQPPNAIVRSLEEALVAA 704

Query: 803  KEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVD 862
             ++GYP+VVRPSYVLGGRAMEIVY ++ L TY+  AV+V  + PVL+D +L++AIE+D+D
Sbjct: 705  DQVGYPLVVRPSYVLGGRAMEIVYKEDELRTYMRTAVQVSEDAPVLLDHFLNNAIEVDID 764

Query: 863  ALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCG 922
            +++D    VVIGGIM+HIEQ GVHSGDSAC +P  ++ +   D +     K+A  L V G
Sbjct: 765  SVSDG-KQVVIGGIMQHIEQCGVHSGDSACSLPPYSLPADVQDDMREIVKKMAIELGVIG 823

Query: 923  LMNCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEV 982
            LMN Q A    G +Y++E NPRASRTVPFVSK IG  LAK AA   +G SL   GFTKE+
Sbjct: 824  LMNTQLAY-QDGKIYVIEVNPRASRTVPFVSKCIGISLAKVAARCQAGVSLEAQGFTKEI 882

Query: 983  IPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSG 1042
            IP + SVKEAV PF KF   D +LGPEM+STGEVMG+  SF  A+ K+Q+ A  ++P SG
Sbjct: 883  IPDYYSVKEAVFPFNKFPAVDPILGPEMKSTGEVMGVGNSFGEAYGKSQLGANNRIPTSG 942

Query: 1043 TVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGD 1102
            T F+S+ D+ K  +  + K   ++GFK+V+T GTA  LE  G+ V  V K+ EGRPH  D
Sbjct: 943  TAFISVRDMDKAGIVSVGKDLAELGFKLVATRGTAAVLEAAGLKVHVVNKVQEGRPHIVD 1002

Query: 1103 MVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTV 1162
            M+ N +I +++ T  G    + D   +RR    ++V   TT++   A   +++ +K   +
Sbjct: 1003 MIKNDEIDLIINTVEGRQATR-DSSSIRRSAENHRVYYNTTLAAGFAVCMSLKEVKD--I 1059

Query: 1163 TMTALQDF 1170
             +  LQD 
Sbjct: 1060 EVRRLQDL 1067


>gi|28871635|ref|NP_794254.1| carbamoyl-phosphate synthase large subunit [Pseudomonas syringae pv.
            tomato str. DC3000]
 gi|213966658|ref|ZP_03394809.1| carbamoyl-phosphate synthase, large subunit [Pseudomonas syringae pv.
            tomato T1]
 gi|301383168|ref|ZP_07231586.1| carbamoyl phosphate synthase large subunit [Pseudomonas syringae pv.
            tomato Max13]
 gi|302063397|ref|ZP_07254938.1| carbamoyl phosphate synthase large subunit [Pseudomonas syringae pv.
            tomato K40]
 gi|302133770|ref|ZP_07259760.1| carbamoyl phosphate synthase large subunit [Pseudomonas syringae pv.
            tomato NCPPB 1108]
 gi|38257463|sp|Q87WP4.1|CARB_PSESM RecName: Full=Carbamoyl-phosphate synthase large chain; AltName:
            Full=Carbamoyl-phosphate synthetase ammonia chain
 gi|28854887|gb|AAO57949.1| carbamoyl-phosphate synthase, large subunit [Pseudomonas syringae pv.
            tomato str. DC3000]
 gi|213928508|gb|EEB62052.1| carbamoyl-phosphate synthase, large subunit [Pseudomonas syringae pv.
            tomato T1]
          Length = 1073

 Score = 1256 bits (3250), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 629/1088 (57%), Positives = 800/1088 (73%), Gaps = 28/1088 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILILGAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPAMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  + V +++EKERPDALLPTMGGQTALN A+ L   G LEK+GVE+IGA  D 
Sbjct: 63   ATYIEPIKWQTVAKIIEKERPDALLPTMGGQTALNCALDLEREGVLEKFGVEMIGANADT 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  F +AMK+IG+  P SGI ++++E  ++  ++G FP IIRP+FT+GGTGGGI
Sbjct: 123  IDKAEDRSRFDKAMKSIGLACPRSGIAHSMEEANAVLEKLG-FPCIIRPSFTMGGTGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEFE IC  GL  S T ++L+++SL+GWKEYE+EV+RD  DN +I+CSIEN DPMG
Sbjct: 182  AYNREEFEEICARGLDLSPTKELLIDESLIGWKEYEMEVVRDKKDNCIIVCSIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ LR+ S+A++REIGVE GGSNVQF + P  G ++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQILRNASLAVLREIGVETGGSNVQFGICPDTGRMVVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIA++AAKL+VGY+LD++ N+IT  KTPASFEPSIDYVVTK+PR
Sbjct: 302  PRVSRSSALASKATGFPIARVAAKLAVGYTLDELSNEITGGKTPASFEPSIDYVVTKLPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            FAFEKF  ++  LTTQMKSVGE MA+GRTFQES QKALR LE G  G       +LD   
Sbjct: 362  FAFEKFAKADARLTTQMKSVGEVMAIGRTFQESLQKALRGLEVGVCGLD----PKLDLSH 417

Query: 507  EQ----LKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLL 562
             +    LK  L VP  +R+  +  A + GM V+EI  ++ ID WFL Q ++L+  E+ + 
Sbjct: 418  PESMSTLKRELTVPGAERIWYVADAFRAGMTVEEIFAMNMIDPWFLVQIEDLVKDEEKIK 477

Query: 563  TQSVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFE 622
            T  +S + +D  Y +KR+GFSD ++A     TEK +R  R  L V P YKRVDTCAAEF 
Sbjct: 478  TLGLSAIDRDLMYRLKRKGFSDARLAKLVGVTEKNLRTHRHKLDVFPVYKRVDTCAAEFA 537

Query: 623  ANTPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIM 682
             +T Y+YS+Y+ ECE+ P+ + K++ILGGGPNRIGQGIEFDYCC H + +L+  GYETIM
Sbjct: 538  TDTAYLYSTYEEECEANPSTRDKIMILGGGPNRIGQGIEFDYCCVHAALALREDGYETIM 597

Query: 683  MNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYL 742
            +N NPETVSTDYDTSDRLYFEP+T+EDVL ++ +E+P+G+IVQ+GGQTPLKL+       
Sbjct: 598  VNCNPETVSTDYDTSDRLYFEPVTLEDVLEIVRVEKPKGVIVQYGGQTPLKLA------- 650

Query: 743  DEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIA 802
               R   A+G   V I GTSPD+ID AEDRERF  +++ L++ QP     +SE +A+  A
Sbjct: 651  ---RALEAAG---VPIIGTSPDAIDRAEDRERFQQMVERLNLRQPPNATVRSEDEAIRAA 704

Query: 803  KEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVD 862
             +IGYP+VVRPSYVLGGRAMEIVY ++ L  YL  AV+V  + PVL+D +L+ AIE+DVD
Sbjct: 705  AKIGYPLVVRPSYVLGGRAMEIVYQEDELKRYLREAVQVSNDSPVLLDHFLNCAIEMDVD 764

Query: 863  ALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCG 922
            A+ D   +VVIG IM+HIEQAGVHSGDSAC +P  ++ +   D +     K+A  L V G
Sbjct: 765  AVCDGT-DVVIGAIMQHIEQAGVHSGDSACSLPPYSLPAHIQDEMREQVKKMALELGVVG 823

Query: 923  LMNCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEV 982
            LMN Q A+    D+Y++E NPRASRTVPFVSK IG  LA  AA VM+GK+L +L FTKE+
Sbjct: 824  LMNVQLALQGE-DIYVIEVNPRASRTVPFVSKCIGVSLAMIAARVMAGKTLKELNFTKEI 882

Query: 983  IPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSG 1042
            IP   SVKEAV PF KF G D +LGPEM+STGEVMG+  +F  AFAKAQ+ A + LP  G
Sbjct: 883  IPNFYSVKEAVFPFAKFPGVDPILGPEMKSTGEVMGVGDTFGEAFAKAQMGASEVLPTGG 942

Query: 1043 TVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGD 1102
            T F+S+ D  KP +E +A+  +++GF+IV+T+GTA  +E  G+ V RV K+ EGRPH  D
Sbjct: 943  TAFISVRDDDKPLVEAVARDLINLGFEIVATAGTAKLIEAAGLKVRRVNKVTEGRPHVVD 1002

Query: 1103 MVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTV 1162
            M+ N ++ +++ T+ G      D   +RR  L +K+   TT++   A  EA++     TV
Sbjct: 1003 MIKNDEVTLIINTTEGRQ-SIADSYSIRRNALQHKIYCTTTIAAGEAICEALKFGPEKTV 1061

Query: 1163 TMTALQDF 1170
                LQD 
Sbjct: 1062 RR--LQDL 1067


>gi|187477421|ref|YP_785445.1| carbamoyl phosphate synthase large subunit [Bordetella avium 197N]
 gi|115422007|emb|CAJ48529.1| carbamoyl-phosphate synthase large chain [Bordetella avium 197N]
          Length = 1079

 Score = 1256 bits (3250), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 645/1078 (59%), Positives = 811/1078 (75%), Gaps = 27/1078 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILI+GAGPI+IGQACEFDYSG QACKALK EGY  IL+NSNPATIMTDP  AD
Sbjct: 3    KRTDIKSILIIGAGPIIIGQACEFDYSGAQACKALKAEGYRTILVNSNPATIMTDPETAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+T + VE+++E+ERPDALLPTMGGQTALN A+ LA +G L KY VELIGA   A
Sbjct: 63   VTYIEPITWQAVEKIIERERPDALLPTMGGQTALNCALDLAHNGVLAKYKVELIGANEHA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECIS----IANEIGE--FPLIIRPAFTLG 261
            I+KAEDR  FK AM  IG+++  SG+ +T++E       IA EIG   FP +IRP+FTLG
Sbjct: 123  IEKAEDRQKFKMAMNDIGLESAKSGVAHTMEEAWEVQRRIAAEIGTSGFPAVIRPSFTLG 182

Query: 262  GTGGGIAYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIE 321
            GTGGGIAYN EEFE IC+ GL AS T+++L+E+SLLGWKE+E+EV+RD ADN +I+CSIE
Sbjct: 183  GTGGGIAYNAEEFETICRRGLEASPTNELLIEESLLGWKEFEMEVVRDKADNCIIVCSIE 242

Query: 322  NVDPMGVHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEV 381
            N+DPMGVHTGDSITVAPAQTLTDKEYQ +RD SIA++REIGV+ GGSNVQFAVNP +G +
Sbjct: 243  NLDPMGVHTGDSITVAPAQTLTDKEYQIMRDASIAVLREIGVDTGGSNVQFAVNPKNGRM 302

Query: 382  MVIEMNPRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITK-KTPASFEPSIDYV 440
            +VIEMNPRVSRSSALASKATGFPIAK+AA+L+VGY+LD++ N+IT   TPASFEP+IDYV
Sbjct: 303  IVIEMNPRVSRSSALASKATGFPIAKVAARLAVGYTLDELKNEITGGATPASFEPTIDYV 362

Query: 441  VTKIPRFAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVK 500
            VTK+PRFAFEKFP ++  LTTQMKSVGE MA+GRTFQESFQKALR LE G  G     + 
Sbjct: 363  VTKVPRFAFEKFPQADARLTTQMKSVGEVMAMGRTFQESFQKALRGLEVGVDG-----LN 417

Query: 501  ELDWDWEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQF 560
            +   D E+L+  L  P P+R+  +  A  +G  +DE+H L+ ID WFL+Q KE++D+E  
Sbjct: 418  QKTTDREKLQVELGEPGPERIWYVGDAFAQGFSLDEVHSLTHIDPWFLSQIKEIVDIELA 477

Query: 561  LLTQSVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAE 620
            L  +++S++     +E+KRRGFSD+++AF   S+E EVR+ R  L V P YKRVDTCAAE
Sbjct: 478  LEQKTLSDLDYATLFELKRRGFSDRRLAFLLDSSESEVRKLRHQLNVRPVYKRVDTCAAE 537

Query: 621  FEANTPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYET 680
            F   T YMYS+Y+ ECE+ PT +KK+++LGGGPNRIGQGIEFDYCC H S +L+  G+ET
Sbjct: 538  FATRTAYMYSTYEEECEAQPTDRKKIIVLGGGPNRIGQGIEFDYCCVHASLALREDGFET 597

Query: 681  IMMNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQ 740
            IM+N NPETVSTDYDTSDRLYFEPLT+EDVL ++  E P G+IVQ+GGQTPLKL+     
Sbjct: 598  IMVNCNPETVSTDYDTSDRLYFEPLTLEDVLEIVHKENPVGMIVQYGGQTPLKLA----- 652

Query: 741  YLDEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALA 800
                 R   A+G   V I GTSP+SID AEDRERF  ++ +L + QP    A++EA+ALA
Sbjct: 653  -----RALEANG---VPIIGTSPESIDVAEDRERFQKLLNKLGLRQPPNRTARTEAEALA 704

Query: 801  IAKEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEID 860
             A EIGYP+VVRPSYVLGGRAMEIV+  + L  Y+  AV+V  + PVL+D++L++A E+D
Sbjct: 705  HAAEIGYPLVVRPSYVLGGRAMEIVHEQQDLERYMREAVKVSNDSPVLLDRFLNNATEVD 764

Query: 861  VDALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNV 920
            VD LAD    V IGG+MEHIEQAGVHSGDSAC +P  ++S+  +  I   T  +A+ LNV
Sbjct: 765  VDCLADG-ETVFIGGVMEHIEQAGVHSGDSACSLPPYSLSADIVAEIKRQTTTMARALNV 823

Query: 921  CGLMNCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTK 980
             GLMN Q+A+   GDVY+LE NPRASRTVP+VSKA G  LAK AA  M+G++L   G T+
Sbjct: 824  SGLMNVQFAV-QDGDVYVLEVNPRASRTVPYVSKATGLQLAKIAARAMAGRTLAQQGVTQ 882

Query: 981  EVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPL 1040
            EV+P + SVKEAV PF KF G D +LGPEM+STGEVMG+  SF  AF K+Q+AAG +LP 
Sbjct: 883  EVVPPYYSVKEAVFPFVKFPGVDTILGPEMKSTGEVMGVGRSFGEAFVKSQLAAGVRLPE 942

Query: 1041 SGTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHA 1100
            SGTVF+S+ +  K     +A+    +GFK+V+T GTA  +E  GI V+ V K+ EGRPH 
Sbjct: 943  SGTVFISVKNQDKSRAVEVARGLHKLGFKLVATRGTAAEIEAAGIPVQLVNKVTEGRPHI 1002

Query: 1101 GDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLK 1158
             DMV NG+I +++ T         D   +R + LA +V   TT++GA A  E ++ L+
Sbjct: 1003 VDMVKNGEIALVINTVEERRNAIADSRTIRTQALANRVTFFTTIAGARAAVEGMQFLR 1060


>gi|429743262|ref|ZP_19276833.1| carbamoyl-phosphate synthase, large subunit [Neisseria sp. oral taxon
            020 str. F0370]
 gi|429165980|gb|EKY07997.1| carbamoyl-phosphate synthase, large subunit [Neisseria sp. oral taxon
            020 str. F0370]
          Length = 1069

 Score = 1256 bits (3250), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 619/1070 (57%), Positives = 797/1070 (74%), Gaps = 22/1070 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTDL+ ILI+GAGPIVIGQACEFDYSG QACKAL+EEGY+VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDLKSILIIGAGPIVIGQACEFDYSGAQACKALREEGYKVILVNSNPATIMTDPEMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  + VE+++ KERPDA+LPTMGGQTALN A+ LA +G L KY VELIGA  DA
Sbjct: 63   VTYIEPIMWQTVEKIIAKERPDAILPTMGGQTALNCALDLARNGVLAKYNVELIGATEDA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  FK+AM+ IG+  P S + +T++E ++   ++G FP +IRP+FT+GG+GGGI
Sbjct: 123  IDKAEDRGRFKEAMEKIGLSCPKSFVCHTMNEALAAQEQVG-FPTLIRPSFTMGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYNK+EF AIC+ G  AS T ++L+E+S+LGWKEYE+EV+RD ADN +IICSIEN DPMG
Sbjct: 182  AYNKDEFLAICERGFDASPTHELLIEQSVLGWKEYEMEVVRDKADNCIIICSIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGV+ GGSNVQFAVNP +GE++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQIMRNASLAVLREIGVDTGGSNVQFAVNPENGEMIVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VG++LD++ NDIT  +TPASFEPSIDYV+TKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGFTLDELRNDITGGRTPASFEPSIDYVITKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            FAFEKFP ++  LTTQMKSVGE MA+GRT QESFQKALR LE G  G+   +      D 
Sbjct: 362  FAFEKFPAADDRLTTQMKSVGEVMAMGRTIQESFQKALRGLETGLCGFNPRS-----EDK 416

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
             +++  L  P P+RM  +  A + G  ++EIHE+  ID WFL Q ++L+  E  +   S+
Sbjct: 417  AEIRRELANPGPERMLFVADAFRAGFTLEEIHEICAIDPWFLAQIEDLVREEAAVAAGSL 476

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
             ++       +KR+GFSDK+IA      EKEVRE R +L + P YKRVDTCAAEF   T 
Sbjct: 477  KDLDYAALRRLKRKGFSDKRIAQLLGVKEKEVREHRYALNLHPVYKRVDTCAAEFATETA 536

Query: 627  YMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSN 686
            Y+YS+Y+ ECE+ P+ +KKV+ILGGGPNRIGQGIEFDYCC H + +L+ +G+ETIM+N N
Sbjct: 537  YLYSTYEEECEARPSDRKKVMILGGGPNRIGQGIEFDYCCVHAALALRESGFETIMVNCN 596

Query: 687  PETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHR 746
            PETVSTD+DTSDRLYFEPLT+EDVL ++  E P G+IV +GGQTPLKL+           
Sbjct: 597  PETVSTDFDTSDRLYFEPLTLEDVLEIVRTENPWGVIVHYGGQTPLKLA----------- 645

Query: 747  LPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEIG 806
              +A  +  V I GTS DSIDAAEDRERF  ++ +L + QP   IA +E +AL  A+EIG
Sbjct: 646  --NALVENGVNIIGTSADSIDAAEDRERFQKVLNDLGLRQPPNRIAHNEEEALVKAEEIG 703

Query: 807  YPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALAD 866
            YP+VVRPSYVLGGRAM++V++ E L  Y+  AV+V  + PVL+D +L++AIE+DVD ++D
Sbjct: 704  YPLVVRPSYVLGGRAMQVVHSAEELQKYMREAVQVSEDSPVLLDFFLNNAIEVDVDCVSD 763

Query: 867  SCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNC 926
               +VVIGGIM+H+EQAG+HSGDS C +P  ++S    D I   T  +A  L V GLMN 
Sbjct: 764  G-KDVVIGGIMQHVEQAGIHSGDSGCSLPPYSLSEEIQDEIRRQTKAMAYALGVVGLMNV 822

Query: 927  QYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPKH 986
            Q+A+   G V++LE NPRASRTVPFVSKA G PLAK  A  M+G +L + G   E+IP  
Sbjct: 823  QFAV-QDGVVFVLEVNPRASRTVPFVSKATGVPLAKVGARCMAGIALKEQGVEHEIIPDF 881

Query: 987  VSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVFL 1046
             +VKEAV PF KF G D +LGPEMRSTGEVMG+  +F  A+ KAQ+ AG+++P +G +FL
Sbjct: 882  YAVKEAVFPFIKFPGVDTILGPEMRSTGEVMGVGETFSEAYLKAQLGAGERMPATGKIFL 941

Query: 1047 SLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVAN 1106
            S+ +  KP + + AK F  +G+ + +T GTA +L   G+ V+ V K+ EGRPH  D + N
Sbjct: 942  SVREEDKPLIVQTAKNFQTLGYGVCATRGTAAYLTEHGVVVQTVNKVPEGRPHIVDAIKN 1001

Query: 1107 GQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRS 1156
            G+I ++V T++ +  +  D   +RR  L  +VP  TTV+G  A +E  +S
Sbjct: 1002 GEIALVVNTTASNPQEIADSHSIRRSALTQRVPQYTTVAGGEAMSEGAKS 1051


>gi|332288950|ref|YP_004419802.1| carbamoyl phosphate synthase large subunit [Gallibacterium anatis
            UMN179]
 gi|330431846|gb|AEC16905.1| carbamoyl phosphate synthase large subunit [Gallibacterium anatis
            UMN179]
          Length = 1062

 Score = 1256 bits (3250), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 619/1072 (57%), Positives = 795/1072 (74%), Gaps = 24/1072 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILI+GAGPIVIGQACEFDYSG QACKAL+EEGY+VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIKTILIIGAGPIVIGQACEFDYSGAQACKALREEGYKVILVNSNPATIMTDPNMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  + VEQ++ KERPDA+LPTMGGQTALN A+ L+++G L+KY VELIGA  DA
Sbjct: 63   VTYIEPIRWQTVEQIIAKERPDAILPTMGGQTALNCALDLSKNGILQKYNVELIGATEDA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  FK+AM  IG+ TP S + +T  E      ++G FP +IRP+FT+GG+GGGI
Sbjct: 123  IDKAEDRGRFKEAMAKIGLHTPKSFVCHTFAEAWQAQEQVG-FPTLIRPSFTMGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEF+AIC+ G  AS T ++L+E+S+LGWKEYE+EV+RD ADN +I+CSIEN+DPMG
Sbjct: 182  AYNREEFQAICERGFDASPTHELLIEQSVLGWKEYEMEVVRDKADNCIIVCSIENLDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGV+ GGSNVQFA+NP +GE++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQIMRNASLAVLREIGVDTGGSNVQFAINPENGEMIVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKK-TPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+L+++ NDIT    P+SFEPSIDYVVTK+PR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGYTLNELRNDITGGLIPSSFEPSIDYVVTKVPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            FAFEKFP ++  LTTQMKSVGE MA+GRTFQES QKALR LE G  G+   +      D 
Sbjct: 362  FAFEKFPQADDRLTTQMKSVGEVMAMGRTFQESLQKALRGLETGICGFNLRS-----EDN 416

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
            E+L++ +  P P+R+  +  A   G  +DE++  + ID WFL Q ++L+  E  L  +++
Sbjct: 417  EKLRHEISNPGPERLLYVADAFGLGWSLDEVYRYTKIDPWFLRQIQDLVQEELALEQKTL 476

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
              +   +   +KR+GFSDK+I   TK++E EVR +R    + P YKRVDTCA EF ++T 
Sbjct: 477  DQLDYAELRRLKRKGFSDKRIGQLTKTSESEVRARRNQFNLHPVYKRVDTCAGEFNSDTA 536

Query: 627  YMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSN 686
            Y+YS Y+ ECE+ P+ +KK++ILGGGPNRIGQGIEFDYCC H + +L+ +G+ETIM+N N
Sbjct: 537  YLYSCYEEECEANPSDRKKIMILGGGPNRIGQGIEFDYCCVHAALALRESGFETIMVNCN 596

Query: 687  PETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHR 746
            PETVSTD+DTSDRLYFEPLT+EDVL +I +E P G+IV +GGQTPLKL+  + +      
Sbjct: 597  PETVSTDFDTSDRLYFEPLTLEDVLEIIHIENPYGVIVHYGGQTPLKLANKLQE------ 650

Query: 747  LPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEIG 806
                  +G V I GTS DSIDAAEDR+RF  I+ +L ++QP    AK+  +A+ +A E+G
Sbjct: 651  ------NG-VNIIGTSADSIDAAEDRQRFQQILNDLKLKQPSNRTAKNAEEAVKLADEVG 703

Query: 807  YPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALAD 866
            YP+VVRPSYVLGGRAM+IVY  + L  Y+  AV+V  + P+L+D +L +AIE+DVD + D
Sbjct: 704  YPLVVRPSYVLGGRAMQIVYNVDELNKYMREAVQVSEDSPILLDHFLDNAIEVDVDCICD 763

Query: 867  SCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNC 926
                VVIGGIM+H+EQAG+HSGDSAC +P  ++S    D I   T ++A  L V GLMN 
Sbjct: 764  G-KQVVIGGIMQHVEQAGIHSGDSACSLPAYSLSQQIQDEIRRQTTEMAFALKVVGLMNV 822

Query: 927  QYAITTSGD-VYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPK 985
            Q+A+   GD VY+LE NPRASRTVPFVSKA G PLAK AA VM+  SL + G  KEVIP+
Sbjct: 823  QFAV--KGDTVYVLEVNPRASRTVPFVSKATGVPLAKIAARVMAEISLAEQGINKEVIPE 880

Query: 986  HVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVF 1045
              +VKEAV PF KF G D +LGPEMRSTGEVMG+  +F  AF KAQ+ AG+ +P  G VF
Sbjct: 881  KFAVKEAVFPFIKFPGVDTILGPEMRSTGEVMGVGETFAEAFIKAQLGAGEHIPHGGKVF 940

Query: 1046 LSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVA 1105
            LS+ D  K  L  + K    +GF + +T GTA FL  +GI V+ V K+ EGRPH  D + 
Sbjct: 941  LSVADQDKQRLLDVVKQLQALGFGLCATYGTAKFLAEQGIIVQHVNKVREGRPHIVDAIK 1000

Query: 1106 NGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSL 1157
            NG+I +++ T  G      D   +RR  L +KV V+TT++GA A A  +  L
Sbjct: 1001 NGEIALVINTVDGKPESVADSHSIRRNALQHKVMVLTTMNGAAALANGLHKL 1052


>gi|359783696|ref|ZP_09286907.1| carbamoyl phosphate synthase large subunit [Pseudomonas
            psychrotolerans L19]
 gi|359368400|gb|EHK68980.1| carbamoyl phosphate synthase large subunit [Pseudomonas
            psychrotolerans L19]
          Length = 1073

 Score = 1256 bits (3250), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 627/1085 (57%), Positives = 804/1085 (74%), Gaps = 22/1085 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILILGAGPIVIGQACEFDYSG QACKAL+EEG+ VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGFRVILVNSNPATIMTDPSMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+    V +++EKERPDALLPTMGGQTALN A+ L   G LEK+GVE+IGA  D 
Sbjct: 63   ATYIEPIKWATVAKIIEKERPDALLPTMGGQTALNCALDLERHGVLEKFGVEMIGANADT 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  F +AMK IG+  P SGI ++++E   +  ++G FP IIRP+FT+GGTGGGI
Sbjct: 123  IDKAEDRSRFDKAMKDIGLACPVSGIAHSMEEAYGVLEKVG-FPCIIRPSFTMGGTGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEFE IC  GL  S T+++L+++SL+GWKEYE+EV+RD  DN +I+CSIEN DPMG
Sbjct: 182  AYNREEFEEICTRGLDLSPTNELLIDESLIGWKEYEMEVVRDKKDNCIIVCSIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGVE GGSNVQF + P  G ++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQIMRNASLAVLREIGVETGGSNVQFGICPNTGRMVVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT  +TPASFEP+IDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKIAAKLAVGYTLDELQNDITGGRTPASFEPAIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            FAFEKFP ++  LTTQMKSVGE M++GRTFQES QKALR LE G  G+    +   D + 
Sbjct: 362  FAFEKFPKADARLTTQMKSVGEVMSIGRTFQESLQKALRGLEVGVVGFD-PKLDPADPEA 420

Query: 507  E-QLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQS 565
            +  LK  L VP  DR+  I  A ++G  +D++ EL+ ID WFL Q ++LI  E+ + T  
Sbjct: 421  DGTLKRELTVPGADRIWYIGDAFRQGYSLDKVFELTRIDPWFLVQIEDLIKDEERIKTLG 480

Query: 566  VSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANT 625
            ++++  D   ++KR+GFSD ++A     TEK +R  R  L V+P YKRVDTCAAEF  +T
Sbjct: 481  LADLDYDLMRKLKRKGFSDARLAKLLGVTEKNLRAHRHKLKVLPVYKRVDTCAAEFATDT 540

Query: 626  PYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNS 685
             Y+YS+Y+ ECE+ P+ + K++ILGGGPNRIGQGIEFDYCC H + +++  G+ETIM+N 
Sbjct: 541  AYLYSTYEEECEAKPSGRDKIMILGGGPNRIGQGIEFDYCCVHAALAMREDGFETIMVNC 600

Query: 686  NPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEH 745
            NPETVSTDYDTSDRL+FEP+T+EDVL ++ +E+P+G+IVQ+GGQTPLKL     + L+E 
Sbjct: 601  NPETVSTDYDTSDRLFFEPVTLEDVLEIVRVEQPKGVIVQYGGQTPLKLC----RALEEA 656

Query: 746  RLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEI 805
             +P         I GTSPD+ID AEDRERF  +++ L++ QP    A+SE +ALA++K I
Sbjct: 657  GVP---------IIGTSPDAIDRAEDRERFQQMVQRLNLRQPANATARSEDEALALSKNI 707

Query: 806  GYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALA 865
            GYP+VVRPSYVLGGRAMEIVY +E L  Y+  AV+V  + PVL+D +L+ AIE+DVDA+ 
Sbjct: 708  GYPMVVRPSYVLGGRAMEIVYQEEELKRYMREAVKVSNDSPVLLDHFLNCAIEVDVDAVC 767

Query: 866  DSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMN 925
            D    VVIG IM+HIEQAGVHSGDSAC +P  ++     D I     K+A  L V GLMN
Sbjct: 768  DG-QTVVIGAIMQHIEQAGVHSGDSACSLPPYSLPKHIQDEIREQVKKMALELGVIGLMN 826

Query: 926  CQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPK 985
             Q A+    D+Y++E NPRASRTVPFVSK IG  LAK AA VM+GK+L ++GFT+E+IP 
Sbjct: 827  VQMAVQGE-DIYVIEVNPRASRTVPFVSKCIGESLAKVAARVMAGKTLAEVGFTQEIIPP 885

Query: 986  HVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVF 1045
              SVKEAV PF KF G D +LGPEM+STGEVMG+  SF  AFAKAQ+ A + LP SG  F
Sbjct: 886  FFSVKEAVFPFNKFPGVDPILGPEMKSTGEVMGVGDSFGEAFAKAQLGANEILPNSGCAF 945

Query: 1046 LSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVA 1105
            +S+ D  KP   ++A+  + +GF++V+T+GTA  +E  G+ V RV K+ EGRPH  DM+ 
Sbjct: 946  ISVRDDDKPEAVQVARDLVGLGFEVVATAGTARVIEAAGLPVRRVNKVTEGRPHVVDMIK 1005

Query: 1106 NGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTVTMT 1165
            N ++ +++ T+ G      D   +RR  L +K+   TT++G  A  EA++     TV   
Sbjct: 1006 NDEVTLIINTTEGRQ-SIADSYSIRRNALQHKLCCTTTIAGGQAICEALKFGAEKTVRR- 1063

Query: 1166 ALQDF 1170
             LQD 
Sbjct: 1064 -LQDL 1067


>gi|325266826|ref|ZP_08133497.1| carbamoyl-phosphate synthase, large subunit [Kingella denitrificans
            ATCC 33394]
 gi|324981567|gb|EGC17208.1| carbamoyl-phosphate synthase, large subunit [Kingella denitrificans
            ATCC 33394]
          Length = 1071

 Score = 1256 bits (3250), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 623/1070 (58%), Positives = 796/1070 (74%), Gaps = 22/1070 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTDL+ ILI+GAGPIVIGQACEFDYSG QACKAL+EEGY+VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDLKSILIIGAGPIVIGQACEFDYSGAQACKALREEGYKVILVNSNPATIMTDPEMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  + VE+++ KERPDA+LPTMGGQTALN A+ LA +G L KY VELIGA  DA
Sbjct: 63   VTYIEPIMWQTVEKIIAKERPDAILPTMGGQTALNCALDLARNGVLAKYNVELIGATEDA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  FK+AM+ IG+  P S + +T++E ++   ++G FP +IRP+FT+GG+GGGI
Sbjct: 123  IDKAEDRGRFKEAMEKIGLSCPKSFVCHTMNEALAAQEQVG-FPTLIRPSFTMGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYNK+EF AIC+ G  AS T ++L+E+S+LGWKEYE+EV+RD ADN +IICSIEN DPMG
Sbjct: 182  AYNKDEFLAICERGFDASPTHELLIEQSVLGWKEYEMEVVRDKADNCIIICSIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGV+ GGSNVQFAVNP +GE++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQIMRNASLAVLREIGVDTGGSNVQFAVNPENGEMIVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VG++LD++ NDIT  +TPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGFTLDELRNDITGGRTPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            FAFEKFP ++  LTTQMKSVGE MA+GRT QESFQKALR LE G  G+   +      D 
Sbjct: 362  FAFEKFPAADDRLTTQMKSVGEVMAMGRTIQESFQKALRGLETGLCGFNPRS-----SDK 416

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
             +++  L  P P+RM  +  A + G  ++EIHE+  ID WFL Q ++L+  EQ +    +
Sbjct: 417  AEIRRELANPGPERMLFVADAFRAGFTLEEIHEICAIDPWFLAQIEDLVKEEQQVSAGCL 476

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
             ++       +KR+GFSDK+IA      EKEVRE R +L + P YKRVDTCAAEF   T 
Sbjct: 477  QDVDFAALRRLKRKGFSDKRIAQLLGVKEKEVREHRYALKLHPVYKRVDTCAAEFATETA 536

Query: 627  YMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSN 686
            Y+YS+Y+ ECE+ P+ +KKV+ILGGGPNRIGQGIEFDYCC H + +L+ +G+ETIM+N N
Sbjct: 537  YLYSTYEEECEARPSDRKKVMILGGGPNRIGQGIEFDYCCVHAALALRESGFETIMVNCN 596

Query: 687  PETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHR 746
            PETVSTD+DTSDRLYFEPLT+EDVL ++  E P G+IV +GGQTPLKL+           
Sbjct: 597  PETVSTDFDTSDRLYFEPLTLEDVLEIVRTENPWGVIVHYGGQTPLKLA----------- 645

Query: 747  LPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEIG 806
              +A  +  V I GTS DSIDAAEDRERF  ++ +L + QP   IA +E +AL  A+EIG
Sbjct: 646  --NALVENGVNIIGTSADSIDAAEDRERFQKVLNDLGLRQPPNRIAHNEEEALVKAEEIG 703

Query: 807  YPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALAD 866
            YP+VVRPSYVLGGRAM++V++ E L  Y+  AV+V  + PVL+D +L++AIE+DVD ++D
Sbjct: 704  YPLVVRPSYVLGGRAMQVVHSAEELQKYMREAVQVSEDSPVLLDFFLNNAIEVDVDCVSD 763

Query: 867  SCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNC 926
               +VVIGGIM+H+EQAG+HSGDS C +P  ++S    D I   T  +A  L V GLMN 
Sbjct: 764  G-KDVVIGGIMQHVEQAGIHSGDSGCSLPPYSLSEEIQDEIRRQTKAMAYALGVVGLMNV 822

Query: 927  QYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPKH 986
            Q+A+   G V++LE NPRASRTVPFVSKA G PLAK  A  M+G SL + G  KEV+P  
Sbjct: 823  QFAV-QDGVVFVLEVNPRASRTVPFVSKATGVPLAKVGARCMAGISLQEQGVEKEVVPDF 881

Query: 987  VSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVFL 1046
             +VKEAV PF KF G D +LGPEMRSTGEVMG+  SF  A+ KAQ+ AG++L  +G +FL
Sbjct: 882  YAVKEAVFPFIKFPGVDTILGPEMRSTGEVMGVGASFGEAYYKAQLGAGERLNPTGKIFL 941

Query: 1047 SLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVAN 1106
            ++ D  KP + + A+ F  +G+ + +T GTA +L+  GI V+ V K+ EGRPH  D + N
Sbjct: 942  AVRDEDKPLIVKTAQNFQALGYGVCATRGTAEYLKEHGIIVQAVNKVQEGRPHIVDAIKN 1001

Query: 1107 GQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRS 1156
            G+I ++V T S  +    D   +RR  L  +VP  TT++G  A +E  +S
Sbjct: 1002 GEIALVVNTVSSSAQSIADSHSIRRTSLTQRVPQYTTIAGGEAMSEGAKS 1051


>gi|330807472|ref|YP_004351934.1| carbamoyl-phosphate synthase large subunit [Pseudomonas
            brassicacearum subsp. brassicacearum NFM421]
 gi|423695284|ref|ZP_17669774.1| carbamoyl-phosphate synthase, large subunit [Pseudomonas fluorescens
            Q8r1-96]
 gi|327375580|gb|AEA66930.1| Carbamoyl-phosphate synthase (ammonia), large chain [Pseudomonas
            brassicacearum subsp. brassicacearum NFM421]
 gi|388009646|gb|EIK70897.1| carbamoyl-phosphate synthase, large subunit [Pseudomonas fluorescens
            Q8r1-96]
          Length = 1073

 Score = 1256 bits (3250), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 631/1088 (57%), Positives = 802/1088 (73%), Gaps = 28/1088 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILILGAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPAMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  + V +++EKERPDALLPTMGGQTALN A+ L   G LEK+GVE+IGA  D 
Sbjct: 63   ATYIEPIKWQTVAKIIEKERPDALLPTMGGQTALNCALDLEREGVLEKFGVEMIGANADT 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  F +AMK+IG+  P SGI ++++E  ++   +G FP IIRP+FT+GGTGGGI
Sbjct: 123  IDKAEDRSRFDKAMKSIGLDCPRSGIAHSMEEANAVLERLG-FPCIIRPSFTMGGTGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEFE IC  GL  S T ++L+++SL+GWKEYE+EV+RD  DN +I+CSIEN DPMG
Sbjct: 182  AYNREEFEEICARGLDLSPTKELLIDESLIGWKEYEMEVVRDKKDNCIIVCSIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ LR+ S+A++REIGVE GGSNVQF + P  G ++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQILRNASLAVLREIGVETGGSNVQFGICPNTGRMVVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT  KTPASFEPSIDYVVTK+PR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGYTLDELSNDITGGKTPASFEPSIDYVVTKLPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDW-D 505
            FAFEKF  ++  LTTQMKSVGE MA+GRTFQES QKALR LE G  G       +LD  D
Sbjct: 362  FAFEKFAKADARLTTQMKSVGEVMAIGRTFQESLQKALRGLEVGVCGLD----PKLDLAD 417

Query: 506  WEQ---LKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLL 562
             E    LK  L VP  +R+  +  A + GM V++I  ++ ID WFL Q ++LI  E+ + 
Sbjct: 418  PESMSVLKRELTVPGAERIWYVADAFRAGMTVEQIFGMNMIDPWFLVQIEDLIKEEEKVK 477

Query: 563  TQSVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFE 622
            T  +S++ +D  + +KR+GFSD ++A     TEK +R  R  L V P YKRVDTCAAEF 
Sbjct: 478  TLGMSSIDRDMMFRLKRKGFSDMRLAKLLGVTEKSLRAHRHKLEVFPVYKRVDTCAAEFA 537

Query: 623  ANTPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIM 682
             +T Y+YS+Y+ ECE+AP+ + K++ILGGGPNRIGQGIEFDYCC H + +L+  GYETIM
Sbjct: 538  TDTAYLYSTYEEECEAAPSTRDKIMILGGGPNRIGQGIEFDYCCVHAALALRDDGYETIM 597

Query: 683  MNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYL 742
            +N NPETVSTDYDTSDRLYFEP+T+EDVL ++ +E+P+G+IVQ+GGQTPLKL+       
Sbjct: 598  VNCNPETVSTDYDTSDRLYFEPVTLEDVLEIVRVEKPKGVIVQYGGQTPLKLA------- 650

Query: 743  DEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIA 802
               R   A+G   V I GTSPD+ID AEDRERF  +++ L++ QP     +SE +A+  A
Sbjct: 651  ---RALEAAG---VPIIGTSPDAIDRAEDRERFQQMVERLNLRQPPNATVRSEDEAIRAA 704

Query: 803  KEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVD 862
             +IGYP+VVRPSYVLGGRAMEIVY ++ L  YL  AV+V  + PVL+D +L+ AIE+DVD
Sbjct: 705  AKIGYPLVVRPSYVLGGRAMEIVYQEDELKRYLREAVQVSNDSPVLLDHFLNCAIEMDVD 764

Query: 863  ALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCG 922
            A++D   +VVIG IM+HIEQAGVHSGDSAC +P  ++ +   D +     K+A  L V G
Sbjct: 765  AVSDG-KDVVIGAIMQHIEQAGVHSGDSACSLPPYSLPAHIQDEMREQVKKMALELGVIG 823

Query: 923  LMNCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEV 982
            LMN Q A+    D+Y++E NPRASRTVPFVSK IG  LA  AA VM+GK+L +L FTKE+
Sbjct: 824  LMNVQLALQGE-DIYVIEVNPRASRTVPFVSKCIGVSLAMIAARVMAGKTLKELNFTKEI 882

Query: 983  IPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSG 1042
            IP   SVKEAV PF KF G D +LGPEM+STGEVMG+  +F  AFAKAQ+ A + LP  G
Sbjct: 883  IPNFYSVKEAVFPFAKFPGVDPILGPEMKSTGEVMGVGDTFGEAFAKAQMGASEVLPTGG 942

Query: 1043 TVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGD 1102
            T F+S+ D  KP +  +A+  +++GF++V+T+GTA  +E  G+ V RV K+ EGRPH  D
Sbjct: 943  TAFISVRDDDKPLVAGVARDLINLGFEVVATAGTARLIEAAGLKVRRVNKVTEGRPHVVD 1002

Query: 1103 MVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTV 1162
            M+ N ++ +++ T+ G      D   +RR  L +K+   TT++   A  EA++     TV
Sbjct: 1003 MIKNDEVTLIINTTEGRQ-SIADSYSIRRNALQHKIYCTTTIAAGEAICEALKFGPEKTV 1061

Query: 1163 TMTALQDF 1170
                LQD 
Sbjct: 1062 RR--LQDL 1067


>gi|398976141|ref|ZP_10686103.1| carbamoyl-phosphate synthase, large subunit [Pseudomonas sp. GM25]
 gi|398139693|gb|EJM28688.1| carbamoyl-phosphate synthase, large subunit [Pseudomonas sp. GM25]
          Length = 1073

 Score = 1256 bits (3249), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 630/1088 (57%), Positives = 802/1088 (73%), Gaps = 28/1088 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILILGAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPDMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  + V +++EKERPDA+LPTMGGQTALN A+ L   G LEK+GVE+IGA  D 
Sbjct: 63   ATYIEPIKWQTVAKIIEKERPDAVLPTMGGQTALNCALDLEREGVLEKFGVEMIGANADT 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  F +AMK IG++ P SGI ++++E  ++   +G FP IIRP+FT+GGTGGGI
Sbjct: 123  IDKAEDRSRFDKAMKAIGLECPRSGIAHSMEEANAVLERLG-FPCIIRPSFTMGGTGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEFE IC  GL  S T ++L+++SL+GWKEYE+EV+RD  DN +I+CSIEN DPMG
Sbjct: 182  AYNREEFEEICARGLDLSPTKELLIDESLIGWKEYEMEVVRDKKDNCIIVCSIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ LR+ S+A++REIGVE GGSNVQF + P  G ++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQILRNASLAVLREIGVETGGSNVQFGICPDTGRMVVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT  +TPASFEPSIDYVVTK+PR
Sbjct: 302  PRVSRSSALASKATGFPIAKIAAKLAVGYTLDELQNDITGGRTPASFEPSIDYVVTKLPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGW----GCSNVKEL 502
            FAFEKF  ++  LTTQMKSVGE MA+GRTFQES QKALR LE G  G       SN + +
Sbjct: 362  FAFEKFANADARLTTQMKSVGEVMAIGRTFQESLQKALRGLEVGVCGLDEKVDLSNPESM 421

Query: 503  DWDWEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLL 562
                  LK  L VP  +R+  +  A + GM V+EI  ++ ID WFL Q ++LI  E+ + 
Sbjct: 422  SV----LKRELTVPGAERIWYVADAFRAGMTVEEIFGMNMIDPWFLVQIEDLIKDEEKVK 477

Query: 563  TQSVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFE 622
            T  +S + +D  Y++KR+GFSD+++A     TEK +R  R  L V P YKRVDTCAAEF 
Sbjct: 478  TLGLSAIDRDLMYKLKRKGFSDQRLAKLLGVTEKNLRTHRHKLEVFPVYKRVDTCAAEFA 537

Query: 623  ANTPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIM 682
             +T Y+YS+Y+ ECE+AP+ + K++ILGGGPNRIGQGIEFDYCC H + +L+  GYETIM
Sbjct: 538  TDTAYLYSTYEEECEAAPSGRDKIIILGGGPNRIGQGIEFDYCCVHAALALRDDGYETIM 597

Query: 683  MNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYL 742
            +N NPETVSTDYDTSDRLYFEP+T+EDVL +  +E+P+G+IVQ+GGQTPLKL+       
Sbjct: 598  VNCNPETVSTDYDTSDRLYFEPVTLEDVLEICRVEKPKGVIVQYGGQTPLKLA------- 650

Query: 743  DEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIA 802
               R   A+G   V I GTSPD+ID AEDRERF  +++ L++ QP     +SE +A+  A
Sbjct: 651  ---RALEAAG---VPIIGTSPDAIDRAEDRERFQQMVERLNLRQPPNATVRSEDEAVRAA 704

Query: 803  KEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVD 862
             +IGYP+VVRPSYVLGGRAMEIVY +E L  YL +AV+V  + PVL+D +L+ AIE+DVD
Sbjct: 705  AKIGYPLVVRPSYVLGGRAMEIVYKEEELKRYLRDAVQVSNDSPVLLDHFLNCAIEMDVD 764

Query: 863  ALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCG 922
            A+ D   +VVIG IM+HIEQAGVHSGDSAC +P  ++ +   D +     K+A  L V G
Sbjct: 765  AVCDG-KDVVIGAIMQHIEQAGVHSGDSACSLPPYSLPAHIQDEMREQVKKMALELGVVG 823

Query: 923  LMNCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEV 982
            LMN Q A+    D+Y++E NPRASRTVPFVSK IG  LA  AA VM+GK+L ++GFTKE+
Sbjct: 824  LMNVQLALQGE-DIYVIEVNPRASRTVPFVSKCIGVSLAMIAARVMAGKTLKEIGFTKEI 882

Query: 983  IPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSG 1042
            IP   SVKEAV PF KF G D +LGPEM+STGEVMG+  +F  AFAKAQ+ A + LP  G
Sbjct: 883  IPNFYSVKEAVFPFAKFPGVDPILGPEMKSTGEVMGVGDTFGEAFAKAQMGASEVLPTGG 942

Query: 1043 TVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGD 1102
            T F+S+ D  KP +  +A+  +++GF++V+T+GTA  +E  G+ V RV K+ EGRPH  D
Sbjct: 943  TAFISVRDDDKPLVAGVARDLINLGFEVVATAGTAKLIEAAGLKVRRVNKVTEGRPHVVD 1002

Query: 1103 MVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTV 1162
            M+ N ++ +++ T+ G      D   +RR  L +K+   TT++   A  EA++     TV
Sbjct: 1003 MIKNDEVTLIINTTEGRQ-SIADSYSIRRNALQHKIYCTTTIAAGEAICEALKFGPEKTV 1061

Query: 1163 TMTALQDF 1170
                LQD 
Sbjct: 1062 RR--LQDL 1067


>gi|423093461|ref|ZP_17081257.1| carbamoyl-phosphate synthase, large subunit [Pseudomonas fluorescens
            Q2-87]
 gi|397885885|gb|EJL02368.1| carbamoyl-phosphate synthase, large subunit [Pseudomonas fluorescens
            Q2-87]
          Length = 1073

 Score = 1256 bits (3249), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 630/1088 (57%), Positives = 800/1088 (73%), Gaps = 28/1088 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILILGAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPAMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  + V +++EKERPDALLPTMGGQTALN A+ L   G LEK+GVE+IGA  D 
Sbjct: 63   ATYIEPIKWQTVAKIIEKERPDALLPTMGGQTALNCALDLEREGVLEKFGVEMIGANADT 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  F +AMK+IG+  P SGI ++++E  ++   +G FP IIRP+FT+GGTGGGI
Sbjct: 123  IDKAEDRSRFDKAMKSIGLDCPRSGIAHSMEEANAVLERLG-FPCIIRPSFTMGGTGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEFE IC  GL  S T ++L+++SL+GWKEYE+EV+RD  DN +I+CSIEN DPMG
Sbjct: 182  AYNREEFEEICARGLDLSPTKELLIDESLIGWKEYEMEVVRDKKDNCIIVCSIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ LR+ S+A++REIGVE GGSNVQF + P  G ++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQILRNASLAVLREIGVETGGSNVQFGICPNTGRMVVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT  KTPASFEPSIDYVVTK+PR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGYTLDELSNDITGGKTPASFEPSIDYVVTKLPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            FAFEKF  ++  LTTQMKSVGE MA+GRTFQES QKALR LE G  G       +LD + 
Sbjct: 362  FAFEKFAKADARLTTQMKSVGEVMAIGRTFQESLQKALRGLEVGVCGLD----PKLDLND 417

Query: 507  EQ----LKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLL 562
             +    LK  L VP  +R+  +  A + GM V++I  ++ ID WFL Q ++LI  E+ + 
Sbjct: 418  PESMSVLKRELTVPGAERIWYVADAFRAGMTVEQIFSMNMIDPWFLVQIEDLIKEEEKVK 477

Query: 563  TQSVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFE 622
            T  +S++  D  + +KR+GFSD ++A     TEK +R  R  L V P YKRVDTCAAEF 
Sbjct: 478  TLGMSSIDHDMMFRLKRKGFSDMRLAKLLGVTEKSLRTHRHKLEVFPVYKRVDTCAAEFA 537

Query: 623  ANTPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIM 682
             +T Y+YS+Y+ ECE+AP+ + K++ILGGGPNRIGQGIEFDYCC H + +L+  GYETIM
Sbjct: 538  TDTAYLYSTYEEECEAAPSTRDKIMILGGGPNRIGQGIEFDYCCVHAALALRDDGYETIM 597

Query: 683  MNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYL 742
            +N NPETVSTDYDTSDRLYFEP+T+EDVL ++ +E+P+G+IVQ+GGQTPLKL+       
Sbjct: 598  VNCNPETVSTDYDTSDRLYFEPVTLEDVLEIVRVEKPKGVIVQYGGQTPLKLA------- 650

Query: 743  DEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIA 802
               R   A+G   V I GTSPDSID AEDRERF  +++ L++ QP     +SE +A+  A
Sbjct: 651  ---RALEAAG---VPIIGTSPDSIDRAEDRERFQQMVERLNLRQPPNATVRSEDEAIRAA 704

Query: 803  KEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVD 862
             +IGYP+VVRPSYVLGGRAMEIVY ++ L  YL  AV+V  + PVL+D +L+ AIE+DVD
Sbjct: 705  AKIGYPLVVRPSYVLGGRAMEIVYQEDELKRYLREAVQVSNDSPVLLDHFLNCAIEMDVD 764

Query: 863  ALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCG 922
            A+ D   +VVIG IM+HIEQAGVHSGDSAC +P  ++ +   D +     K+A  L V G
Sbjct: 765  AVCDG-KDVVIGAIMQHIEQAGVHSGDSACSLPPYSLPAHIQDEMREQVKKMALELGVIG 823

Query: 923  LMNCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEV 982
            LMN Q A+    D+Y++E NPRASRTVPFVSK IG  LA  AA VM+GK+L +L FTKE+
Sbjct: 824  LMNVQLALQGE-DIYVIEVNPRASRTVPFVSKCIGVSLAMIAARVMAGKTLKELNFTKEI 882

Query: 983  IPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSG 1042
            IP   SVKEAV PF KF G D +LGPEM+STGEVMG+  +F  AFAKAQ+ A + LP  G
Sbjct: 883  IPNFYSVKEAVFPFAKFPGVDPILGPEMKSTGEVMGVGDTFGEAFAKAQMGASEVLPTGG 942

Query: 1043 TVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGD 1102
            T F+S+ D  KP +  +A+  +++GF++V+T+GTA  +E  G+ V RV K+ EGRPH  D
Sbjct: 943  TAFISVRDDDKPLVAGVARDLINLGFEVVATAGTAKLIEAAGLKVRRVNKVTEGRPHVVD 1002

Query: 1103 MVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTV 1162
            M+ N ++ +++ T+ G      D   +RR  L +K+   TT++   A  EA++     TV
Sbjct: 1003 MIKNDEVTLIINTTEGRQ-SIADSYSIRRNALQHKIYCTTTIAAGEAICEALKFGPEKTV 1061

Query: 1163 TMTALQDF 1170
                LQD 
Sbjct: 1062 RR--LQDL 1067


>gi|70734326|ref|YP_257966.1| carbamoyl phosphate synthase large subunit [Pseudomonas protegens
            Pf-5]
 gi|68348625|gb|AAY96231.1| carbamoyl-phosphate synthase, large subunit [Pseudomonas protegens
            Pf-5]
          Length = 1073

 Score = 1256 bits (3249), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 631/1089 (57%), Positives = 804/1089 (73%), Gaps = 30/1089 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILILGAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPAMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  + V +++EKERPDALLPTMGGQTALN A+ L   G LEK+GVE+IGA  D 
Sbjct: 63   ATYIEPIKWQTVAKIIEKERPDALLPTMGGQTALNCALDLEREGVLEKFGVEMIGANADT 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  F  AMK+IG+  P SGI ++++E  ++ +++G FP IIRP+FT+GGTGGGI
Sbjct: 123  IDKAEDRSRFDAAMKSIGLACPRSGIAHSMEEANAVLDKLG-FPCIIRPSFTMGGTGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEFE IC  GL  S T ++L+++SL+GWKEYE+EV+RD  DN +I+CSIEN DPMG
Sbjct: 182  AYNREEFEEICARGLDLSPTKELLIDESLIGWKEYEMEVVRDKKDNCIIVCSIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ LR+ S+A++REIGVE GGSNVQF + P  G ++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQILRNASLAVLREIGVETGGSNVQFGICPNTGRMVVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT  KTPASFEPSIDYVVTK+PR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGYTLDELSNDITGGKTPASFEPSIDYVVTKLPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSG----WGCSNVKEL 502
            FAFEKF  ++  LTTQMKSVGE MA+GRTFQES QKALR LE G  G       SN + +
Sbjct: 362  FAFEKFSKADARLTTQMKSVGEVMAIGRTFQESLQKALRGLEVGVCGLDPKLDLSNPESM 421

Query: 503  DWDWEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLL 562
            +     LK  L VP  +R+  +  A + GM V++I  ++ ID WFL Q ++LI  E+ + 
Sbjct: 422  NV----LKRELTVPGAERIWYVADAFRAGMTVEQIFGMNMIDPWFLVQIEDLIKEEEKVK 477

Query: 563  TQSVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFE 622
            T  +S + +D  + +KR+GFSD+++A     TEK +R  R  L V P YKRVDTCAAEF 
Sbjct: 478  TLGLSAIDRDLMFRLKRKGFSDQRLAKLLGVTEKNLRTHRQKLEVFPVYKRVDTCAAEFA 537

Query: 623  ANTPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIM 682
             +T Y+YS+Y+ ECE+AP+ + K++ILGGGPNRIGQGIEFDYCC H + +L+  GYETIM
Sbjct: 538  TDTAYLYSTYEEECEAAPSTRDKIMILGGGPNRIGQGIEFDYCCVHAALALRDDGYETIM 597

Query: 683  MNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYL 742
            +N NPETVSTDYDTSDRLYFEP+T+EDVL ++ +E+P+G+IVQ+GGQTPLKL+       
Sbjct: 598  VNCNPETVSTDYDTSDRLYFEPVTLEDVLEIVRVEKPKGVIVQYGGQTPLKLA------- 650

Query: 743  DEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIA 802
               R   A+G   V I GTSPD+ID AEDRERF  +++ L++ QP     +SE +A+  A
Sbjct: 651  ---RALEAAG---VPIIGTSPDAIDRAEDRERFQQMVERLNLRQPPNATVRSEDEAIRAA 704

Query: 803  KEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVD 862
             +IGYP+VVRPSYVLGGRAMEIVY ++ L  YL  AV+V  + PVL+D +L+ AIE+DVD
Sbjct: 705  AKIGYPLVVRPSYVLGGRAMEIVYEEDELKRYLREAVQVSNDSPVLLDHFLNCAIEMDVD 764

Query: 863  ALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCG 922
            A+ D   +VVIG IM+HIEQAGVHSGDSAC +P  ++ +   D +     K+A  L V G
Sbjct: 765  AVCDGT-DVVIGAIMQHIEQAGVHSGDSACSLPPYSLPAHIQDEMREQVKKMALELGVVG 823

Query: 923  LMNCQYAITTSGD-VYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKE 981
            LMN Q A+   GD +Y++E NPRASRTVPFVSK IG  LA  AA VM+GK+L +LGFTKE
Sbjct: 824  LMNVQLAL--QGDQIYVIEVNPRASRTVPFVSKCIGVSLAMIAARVMAGKTLKELGFTKE 881

Query: 982  VIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLS 1041
            +IP   SVKEAV PF KF G D +LGPEM+STGEVMG+  +F  AFAKAQ+ A + LP  
Sbjct: 882  IIPNFYSVKEAVFPFAKFPGVDPILGPEMKSTGEVMGVGDTFGEAFAKAQMGASEVLPTG 941

Query: 1042 GTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAG 1101
            GT F+S+ D  KP +  +A+  +++GF++V+T+GTA  +E  G+ V RV K+ EGRPH  
Sbjct: 942  GTAFISVRDDDKPLVAGVARDLINLGFEVVATAGTAKLIEAAGLKVRRVNKVTEGRPHVV 1001

Query: 1102 DMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNT 1161
            DM+ N ++ +++ T+ G      D   +RR  L +K+   TT++   A  EA++     T
Sbjct: 1002 DMIKNDEVTLIINTTEGRQ-SIADSYSIRRNALQHKIYCTTTIAAGEAICEALKFGPEKT 1060

Query: 1162 VTMTALQDF 1170
            V    LQD 
Sbjct: 1061 VRR--LQDL 1067


>gi|77456994|ref|YP_346499.1| carbamoyl phosphate synthase large subunit [Pseudomonas fluorescens
            Pf0-1]
 gi|77380997|gb|ABA72510.1| carbamoyl-phosphate synthase large chain [Pseudomonas fluorescens
            Pf0-1]
          Length = 1073

 Score = 1256 bits (3249), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 629/1088 (57%), Positives = 802/1088 (73%), Gaps = 28/1088 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILILGAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPDMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  + V +++EKERPDA+LPTMGGQTALN A+ L   G LEK+GVE+IGA  D 
Sbjct: 63   ATYIEPIKWQTVAKIIEKERPDAVLPTMGGQTALNCALDLEREGVLEKFGVEMIGANADT 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  F +AMK IG++ P SGI ++++E  ++   +G FP IIRP+FT+GGTGGGI
Sbjct: 123  IDKAEDRSRFDKAMKAIGLECPRSGIAHSMEEANAVLERLG-FPCIIRPSFTMGGTGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEFE IC  GL  S T ++L+++SL+GWKEYE+EV+RD  DN +I+CSIEN DPMG
Sbjct: 182  AYNREEFEEICARGLDLSPTKELLIDESLIGWKEYEMEVVRDKKDNCIIVCSIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ LR+ S+A++REIGVE GGSNVQF + P  G ++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQILRNASLAVLREIGVETGGSNVQFGICPDTGRMVVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT  +TPASFEPSIDYVVTK+PR
Sbjct: 302  PRVSRSSALASKATGFPIAKIAAKLAVGYTLDELQNDITGGRTPASFEPSIDYVVTKLPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGW----GCSNVKEL 502
            FAFEKF  ++  LTTQMKSVGE MA+GRTFQES QKALR LE G  G       SN + +
Sbjct: 362  FAFEKFANADARLTTQMKSVGEVMAIGRTFQESLQKALRGLEVGVCGLDEKVDLSNPESM 421

Query: 503  DWDWEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLL 562
                  LK  L VP  +R+  +  A + GM V+EI  ++ ID WFL Q ++L+  E+ + 
Sbjct: 422  SV----LKRELTVPGAERIWYVADAFRAGMTVEEIFGMNMIDPWFLVQIEDLVKDEEKVK 477

Query: 563  TQSVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFE 622
            T  +S + +D  Y++KR+GFSD+++A     TEK +R  R  L V P YKRVDTCAAEF 
Sbjct: 478  TLGLSAIDRDLMYKLKRKGFSDQRLAKLLGVTEKNLRTHRHKLEVFPVYKRVDTCAAEFA 537

Query: 623  ANTPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIM 682
             +T Y+YS+Y+ ECE+AP+ + K++ILGGGPNRIGQGIEFDYCC H + +L+  GYETIM
Sbjct: 538  TDTAYLYSTYEEECEAAPSGRDKIIILGGGPNRIGQGIEFDYCCVHAALALRDDGYETIM 597

Query: 683  MNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYL 742
            +N NPETVSTDYDTSDRLYFEP+T+EDVL +  +E+P+G+IVQ+GGQTPLKL+       
Sbjct: 598  VNCNPETVSTDYDTSDRLYFEPVTLEDVLEICRVEKPKGVIVQYGGQTPLKLA------- 650

Query: 743  DEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIA 802
               R   A+G   V I GTSPD+ID AEDRERF  +++ L++ QP     +SE +A+  A
Sbjct: 651  ---RALEAAG---VPIIGTSPDAIDRAEDRERFQQMVERLNLRQPPNATVRSEDEAVRAA 704

Query: 803  KEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVD 862
             +IGYP+VVRPSYVLGGRAMEIVY +E L  YL +AV+V  + PVL+D +L+ AIE+DVD
Sbjct: 705  AKIGYPLVVRPSYVLGGRAMEIVYKEEELKRYLRDAVQVSNDSPVLLDHFLNCAIEMDVD 764

Query: 863  ALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCG 922
            A+ D   +VVIG IM+HIEQAGVHSGDSAC +P  ++ +   D +     K+A  L V G
Sbjct: 765  AVCDG-KDVVIGAIMQHIEQAGVHSGDSACSLPPYSLPARIQDEMREQVKKMALELGVVG 823

Query: 923  LMNCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEV 982
            LMN Q A+    D+Y++E NPRASRTVPFVSK IG  LA  AA VM+GK+L ++GFTKE+
Sbjct: 824  LMNVQLALQGE-DIYVIEVNPRASRTVPFVSKCIGISLAMVAARVMAGKTLKEIGFTKEI 882

Query: 983  IPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSG 1042
            IP   SVKEAV PF KF G D +LGPEM+STGEVMG+  +F  AFAKAQ+ A + LP  G
Sbjct: 883  IPNFYSVKEAVFPFAKFPGVDPILGPEMKSTGEVMGVGDTFGEAFAKAQMGASEVLPTGG 942

Query: 1043 TVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGD 1102
            T F+S+ D  KP +  +A+  +++GF++V+T+GTA  +E  G+ V RV K+ EGRPH  D
Sbjct: 943  TAFISVRDDDKPLVAGVARDLINLGFEVVATAGTAKLIEAAGLKVRRVNKVTEGRPHVVD 1002

Query: 1103 MVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTV 1162
            M+ N ++ +++ T+ G      D   +RR  L +K+   TT++   A  EA++     TV
Sbjct: 1003 MIKNDEVTLIINTTEGRQ-SIADSYSIRRNALQHKIYCTTTIAAGEAICEALKFGPEKTV 1061

Query: 1163 TMTALQDF 1170
                LQD 
Sbjct: 1062 RR--LQDL 1067


>gi|303247248|ref|ZP_07333522.1| carbamoyl-phosphate synthase, large subunit [Desulfovibrio
            fructosovorans JJ]
 gi|302491407|gb|EFL51295.1| carbamoyl-phosphate synthase, large subunit [Desulfovibrio
            fructosovorans JJ]
          Length = 1079

 Score = 1256 bits (3249), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 637/1092 (58%), Positives = 807/1092 (73%), Gaps = 26/1092 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++KI+I+G+GPIVIGQACEFDYSG+QA KALKEEGYEV+L+NSNPATIMTDPGLAD
Sbjct: 3    KRTDIKKIMIIGSGPIVIGQACEFDYSGSQAAKALKEEGYEVVLVNSNPATIMTDPGLAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
            RTY+ P+ P  V +++ +E+PDA+LPT+GGQT LN AVALAESG L ++GVELIGA LD 
Sbjct: 63   RTYVEPIEPASVARIIAREKPDAVLPTLGGQTGLNTAVALAESGVLAEHGVELIGASLDV 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            IKKAE R+LF++AM+ IG+  P SGI +T+D+      +I  FP+I+RPAFTLGGTGGG+
Sbjct: 123  IKKAESRELFREAMENIGLTIPQSGICHTMDDVREWGKKIA-FPIIVRPAFTLGGTGGGV 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN E+ E I   GLAAS+ S++++E+S+LGWKE+ELE+MRD ADN VIICSIEN+DPMG
Sbjct: 182  AYNMEDLEKISARGLAASMKSEIMLERSVLGWKEFELELMRDRADNCVIICSIENIDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDS TVAP QTLTD+EYQ++R+ +IAI+REIGVE GGSNVQFAVNP DGE+++IEMN
Sbjct: 242  VHTGDSATVAPIQTLTDEEYQKMRNAAIAIMREIGVETGGSNVQFAVNPADGEMVIIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRF 447
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD+IPNDIT++T ASFEP+IDY V KIPRF
Sbjct: 302  PRVSRSSALASKATGFPIAKIAAKLAVGYTLDEIPNDITRETMASFEPTIDYCVVKIPRF 361

Query: 448  AFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDWE 507
             FEKFPGSE  LTT MKSVGEAM++GR F+E+ QK LRSLE G +G G   V   + D E
Sbjct: 362  TFEKFPGSEDYLTTAMKSVGEAMSIGRNFKEALQKGLRSLEIGATGLGPDAVS-CEPDRE 420

Query: 508  QLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSVS 567
            QL   +R PN  R+  +  AM+ G+ ++EI + ++ID WFL Q KE++D+E  L      
Sbjct: 421  QLLADMRKPNSKRLFQLRQAMRCGVTLEEIFDATWIDPWFLRQIKEIVDMEVTLEAFPKK 480

Query: 568  NMTKDD------FYEVKRRGFSDKQIAFATK-STEKEVREKRLSLGVIPSYKRVDTCAAE 620
             +   D          K+ GFSD QIA   + ++  + R+ R  +GV P+Y  VDTCAAE
Sbjct: 481  KVAAGDPECRELVTAAKKDGFSDPQIASLLRLASPLDARKLRQDMGVAPTYYLVDTCAAE 540

Query: 621  FEANTPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYET 680
            FEA TPY YS+Y+   E A    +KV+ILGGGPNRIGQGIEFDYCCCH S++L++ G E+
Sbjct: 541  FEAYTPYYYSTYETGREVAAKPARKVVILGGGPNRIGQGIEFDYCCCHASYALRAMGVES 600

Query: 681  IMMNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQ 740
            IM+NSNPETVSTDYDTSDRLYFEPLT EDVLN+I+ E+PEG+IVQFGGQTPL L++P+  
Sbjct: 601  IMVNSNPETVSTDYDTSDRLYFEPLTFEDVLNIIESEKPEGVIVQFGGQTPLNLAVPLL- 659

Query: 741  YLDEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALA 800
                        D  VRI GTSPDSID AEDRERF  ++ +L + QP  G A +  +A A
Sbjct: 660  ------------DAGVRILGTSPDSIDRAEDRERFQELLIKLGLRQPANGTAFTVDEAAA 707

Query: 801  IAKEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEID 860
            IA +IGYPVVVRPSYVLGGRAMEIVY    L  Y + AV    + P+LIDK+L +A E+D
Sbjct: 708  IADKIGYPVVVRPSYVLGGRAMEIVYDRGDLENYFKVAVVASGKHPILIDKFLVNATEVD 767

Query: 861  VDALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNV 920
            VDA++D   +  + G+MEHIE+AG+HSGDSAC++P  ++S   +  I   T+ LAK L V
Sbjct: 768  VDAVSDGT-DTYVAGVMEHIEEAGIHSGDSACVLPPHSLSPELVAEIERQTVALAKELGV 826

Query: 921  CGLMNCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTK 980
             GLMN Q+A+   GD+Y+LE NPRASRT PFVSKA G PL K A  V+ G+ L DL    
Sbjct: 827  IGLMNIQFAV-KDGDIYILEVNPRASRTSPFVSKATGVPLPKLATQVIMGEKLKDLDPWS 885

Query: 981  EVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPL 1040
                 + +VKE+V PF +F G DVLLGPEMRSTGEVMG+D S  +AF K+Q+ AGQ LPL
Sbjct: 886  MRKKGYYAVKESVFPFNRFPGVDVLLGPEMRSTGEVMGVDASVGLAFMKSQLGAGQNLPL 945

Query: 1041 SGTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHA 1100
            SGTVF+S+ D  K  +   A+    +GF+I++T GTA +LE KGIAV  V+K+ EGRPH 
Sbjct: 946  SGTVFISVADEAKDDVLPAARILGQLGFRIMATKGTAAYLEDKGIAVTPVMKVFEGRPHV 1005

Query: 1101 GDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSN 1160
             D + N +I  +VI    D     D + +R+  L Y +P  TT +GA A A+AIR +   
Sbjct: 1006 VDHMKNREID-LVINLISDKRTVRDSMAIRQTALLYGIPYTTTAAGAKAMAQAIREMGGG 1064

Query: 1161 T-VTMTALQDFF 1171
              +T+ +LQ+++
Sbjct: 1065 QGLTVKSLQEYY 1076


>gi|372489674|ref|YP_005029239.1| carbamoyl-phosphate synthase large subunit [Dechlorosoma suillum PS]
 gi|359356227|gb|AEV27398.1| carbamoyl-phosphate synthase, large subunit [Dechlorosoma suillum PS]
          Length = 1068

 Score = 1256 bits (3249), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 643/1069 (60%), Positives = 803/1069 (75%), Gaps = 22/1069 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILI+GAGPI+IGQACEFDYSG QACKALK EGY VIL+NSNPATIMTDP  AD
Sbjct: 3    KRTDIKSILIIGAGPIIIGQACEFDYSGAQACKALKAEGYRVILVNSNPATIMTDPETAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P++ ++VE+++EKERPDALLPTMGGQTALN A+ LA+ G LEK+GVELIGA  +A
Sbjct: 63   VTYIEPISWKVVEKIIEKERPDALLPTMGGQTALNCALDLAKHGVLEKFGVELIGASEEA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR+ FK AM  IG+ +  S + ++++E + +   IG FP IIRP+FTLGG+GGGI
Sbjct: 123  IDKAEDREKFKAAMTKIGLGSARSAVAHSMEEALQVQAMIG-FPAIIRPSFTLGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYNKEEF  IC+ GL AS T ++L+E+SL+GWKEYE+EV+RD  DN +IICSIEN+DPMG
Sbjct: 182  AYNKEEFVTICERGLEASPTKELLIEESLIGWKEYEMEVVRDSKDNCIIICSIENLDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ +R+ SIA++REIGV+ GGSNVQFA++P DG ++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQIMRNASIAVLREIGVDTGGSNVQFAISPKDGRMIVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ N+IT  KTPASFEPSIDYVVTK+PR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGYTLDELANEITGGKTPASFEPSIDYVVTKVPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            FAFEKFP ++  LTTQMKSVGE MA+GRT QES QKALR LE G  G+      E   D 
Sbjct: 362  FAFEKFPTADFHLTTQMKSVGEVMAIGRTLQESLQKALRGLEVGVDGF-----DEKTTDR 416

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
            E ++  L  P P+R+  +  A + GM +DEIH L+ ID WFL Q ++L    + L  +SV
Sbjct: 417  EVIETELAEPGPERIWYVGDAFRIGMTLDEIHRLTHIDPWFLAQIEDLHLKAKSLAGRSV 476

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
             ++++++   +K+ GFSDK++A    +T+  VRE+R +L V P +KRVDTCAAEF  NT 
Sbjct: 477  DSLSREELLVLKKCGFSDKRLAKLLATTQTAVRERRHALNVRPVFKRVDTCAAEFATNTA 536

Query: 627  YMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSN 686
            YMYS+Y+ ECE+ P+ KKK+++LGGGPNRIGQGIEFDYCC H + +++  GYETIM+N N
Sbjct: 537  YMYSTYEDECEAQPSDKKKIMVLGGGPNRIGQGIEFDYCCVHAAMAMREDGYETIMVNCN 596

Query: 687  PETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHR 746
            PETVSTDYDTSDRLYFEPLT+EDVL V+++E+P G+IVQ+GGQTPLKL+          R
Sbjct: 597  PETVSTDYDTSDRLYFEPLTLEDVLEVVNVEKPVGVIVQYGGQTPLKLA----------R 646

Query: 747  LPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEIG 806
               A+G   V I GTSPD IDAAEDRERF  ++ EL ++QP    A++EADALA+A+EIG
Sbjct: 647  DLEANG---VPIIGTSPDMIDAAEDRERFQKLLHELGLKQPPNRTARNEADALALAQEIG 703

Query: 807  YPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALAD 866
            YP+VVRPSYVLGGRAMEIV+    L  Y+  AV+V  + PVL+D++L+DA E+DVDAL+D
Sbjct: 704  YPLVVRPSYVLGGRAMEIVHQQSDLERYMREAVKVSNDSPVLLDRFLNDACEVDVDALSD 763

Query: 867  SCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNC 926
                V+IGG+MEHIEQAGVHSGDSAC +P  +++    D +   T  +AK LNVCGLMN 
Sbjct: 764  G-DEVIIGGVMEHIEQAGVHSGDSACSLPPYSLTKEVTDELRRQTKLMAKALNVCGLMNV 822

Query: 927  QYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPKH 986
            Q+AI     VY+LE NPRASRTVPFVSKA G  LAK AA  M+G+SL   G TKEVIP +
Sbjct: 823  QFAIQND-TVYVLEVNPRASRTVPFVSKATGLQLAKIAARCMAGQSLKSQGITKEVIPPY 881

Query: 987  VSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVFL 1046
             SVKEAV PF KF G D +LGPEM+STGEVMG+  +F  AF K+Q+AAG KLP  G VFL
Sbjct: 882  FSVKEAVFPFVKFPGVDTILGPEMKSTGEVMGVGTTFAEAFVKSQLAAGVKLPTGGKVFL 941

Query: 1047 SLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVAN 1106
            S+ D  K     +A+     GF I++T GT   +E  GI V  V K+ EGRPH  DM+ N
Sbjct: 942  SVKDSDKTKAVDVARDLHAAGFTILATRGTGAAMEAAGIPVTVVNKVTEGRPHIVDMIKN 1001

Query: 1107 GQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIR 1155
             +I +++ T         D   +R  GLA +V + TT+ GA A A  IR
Sbjct: 1002 NEIALIINTVDEKRQAINDSRSIRTSGLAARVTMYTTIWGAEAAAAGIR 1050



 Score =  251 bits (641), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 160/453 (35%), Positives = 246/453 (54%), Gaps = 24/453 (5%)

Query: 36  YSNKKTGSLSLRSWPPQLTRYSRSRVRASSAKIDS-SAELSNGAA----SSKDQKLGKRT 90
           +S+K+   L   +      R     VR    ++D+ +AE +   A    + +D+   + +
Sbjct: 492 FSDKRLAKLLATTQTAVRERRHALNVRPVFKRVDTCAAEFATNTAYMYSTYEDECEAQPS 551

Query: 91  DLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLADRTY 150
           D +KI++LG GP  IGQ  EFDY    A  A++E+GYE I++N NP T+ TD   +DR Y
Sbjct: 552 DKKKIMVLGGGPNRIGQGIEFDYCCVHAAMAMREDGYETIMVNCNPETVSTDYDTSDRLY 611

Query: 151 ITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDAIKK 210
             P+T E V +V+  E+P  ++   GGQT L LA        LE  GV +IG   D I  
Sbjct: 612 FEPLTLEDVLEVVNVEKPVGVIVQYGGQTPLKLA------RDLEANGVPIIGTSPDMIDA 665

Query: 211 AEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGIAYN 270
           AEDR+ F++ +  +G+K PP+       + +++A EIG +PL++RP++ LGG    I + 
Sbjct: 666 AEDRERFQKLLHELGLKQPPNRTARNEADALALAQEIG-YPLVVRPSYVLGGRAMEIVHQ 724

Query: 271 KEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMGVHT 330
           + + E   +  +  S  S VL+++ L    E +++ + D  D V+I   +E+++  GVH+
Sbjct: 725 QSDLERYMREAVKVSNDSPVLLDRFLNDACEVDVDALSD-GDEVIIGGVMEHIEQAGVHS 783

Query: 331 GDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMNPRV 390
           GDS    P  +LT +    LR  +  + + + V CG  NVQFA+   +  V V+E+NPR 
Sbjct: 784 GDSACSLPPYSLTKEVTDELRRQTKLMAKALNV-CGLMNVQFAIQ--NDTVYVLEVNPRA 840

Query: 391 SRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRFAFE 450
           SR+    SKATG  +AK+AA+   G SL      ITK+      P   Y   K   F F 
Sbjct: 841 SRTVPFVSKATGLQLAKIAARCMAGQSLKS--QGITKEV---IPP---YFSVKEAVFPFV 892

Query: 451 KFPGSEPLLTTQMKSVGEAMALGRTFQESFQKA 483
           KFPG + +L  +MKS GE M +G TF E+F K+
Sbjct: 893 KFPGVDTILGPEMKSTGEVMGVGTTFAEAFVKS 925


>gi|312963094|ref|ZP_07777579.1| carbamoyl-phosphate synthase, large subunit [Pseudomonas fluorescens
            WH6]
 gi|311282605|gb|EFQ61201.1| carbamoyl-phosphate synthase, large subunit [Pseudomonas fluorescens
            WH6]
          Length = 1073

 Score = 1256 bits (3249), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 629/1088 (57%), Positives = 803/1088 (73%), Gaps = 28/1088 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILILGAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPAMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  + V +++EKERPDALLPTMGGQTALN A+ L   G LEK+GVE+IGA  D 
Sbjct: 63   ATYIEPIKWQTVAKIIEKERPDALLPTMGGQTALNCALDLEREGVLEKFGVEMIGANADT 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  F +AMK+IG+  P SGI ++++E  ++   +G FP IIRP+FT+GGTGGGI
Sbjct: 123  IDKAEDRSRFDKAMKSIGLACPRSGIAHSMEEANAVLETLG-FPCIIRPSFTMGGTGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEFE IC  GL  S T ++L+++SL+GWKEYE+EV+RD  DN +I+CSIEN DPMG
Sbjct: 182  AYNREEFEEICARGLDLSPTKELLIDESLIGWKEYEMEVVRDKNDNCIIVCSIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ LR+ S+A++REIGVE GGSNVQF + P  G ++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQILRNASLAVLREIGVETGGSNVQFGICPDTGRMVVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT  KTPASFEPSIDYVVTK+PR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGYTLDELSNDITGGKTPASFEPSIDYVVTKLPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            FAFEKF  ++  LTTQMKSVGE MA+GRTFQES QKALR LE G  G      ++LD   
Sbjct: 362  FAFEKFAKADARLTTQMKSVGEVMAIGRTFQESLQKALRGLEVGVCGLD----EKLDLSN 417

Query: 507  EQ----LKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLL 562
             +    LK  L VP  +R+  +  A + GM V++I  ++ ID WFL Q ++LI  E+ + 
Sbjct: 418  PESMSILKRELTVPGAERIWYVADAFRAGMTVEDIFGMNMIDPWFLVQIEDLIKEEEKVK 477

Query: 563  TQSVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFE 622
            T  ++++ +D  + +KR+GFSD+++A     TEK +R  R  L + P YKRVDTCAAEF 
Sbjct: 478  TLGLASIDRDMMFRLKRKGFSDQRLAKLLGVTEKNLRTHRHKLEIFPVYKRVDTCAAEFS 537

Query: 623  ANTPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIM 682
             +T Y+YS+Y+ ECE+AP+ + K++ILGGGPNRIGQGIEFDYCC H + +L+  GYETIM
Sbjct: 538  TDTAYLYSTYEEECEAAPSGRDKIMILGGGPNRIGQGIEFDYCCVHAALALREDGYETIM 597

Query: 683  MNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYL 742
            +N NPETVSTDYDTSDRLYFEP+T+EDVL ++ +E+P+G+IVQ+GGQTPLKL+       
Sbjct: 598  VNCNPETVSTDYDTSDRLYFEPVTLEDVLEIVRVEKPKGVIVQYGGQTPLKLA------- 650

Query: 743  DEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIA 802
               R   A+G   V I GTSPD+ID AEDRERF  +++ L++ QP     +SE +A+  A
Sbjct: 651  ---RALEAAG---VPIIGTSPDAIDRAEDRERFQQMVERLNLRQPPNATVRSEDEAIRAA 704

Query: 803  KEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVD 862
             +IGYP+VVRPSYVLGGRAMEIVY +E L  YL +AV+V  + PVL+D +L+ AIE+DVD
Sbjct: 705  SKIGYPLVVRPSYVLGGRAMEIVYEEEELKRYLRDAVKVSNDSPVLLDHFLNCAIEMDVD 764

Query: 863  ALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCG 922
            A+ D   +VVIG IM+HIEQAGVHSGDSAC +P  ++     D +     K+A  L V G
Sbjct: 765  AVCDGT-DVVIGAIMQHIEQAGVHSGDSACSLPPYSLPLHIQDEMREQVKKMALELGVVG 823

Query: 923  LMNCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEV 982
            LMN Q A+    D+Y++E NPRASRTVPFVSK IG  LA  AA VM+GK+L ++GFTKE+
Sbjct: 824  LMNVQLALQGE-DIYVIEVNPRASRTVPFVSKCIGVSLAMIAARVMAGKTLKEIGFTKEI 882

Query: 983  IPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSG 1042
            IP   SVKEAV PF KF G D +LGPEM+STGEVMG+  +F  AFAKAQ+ A + LP  G
Sbjct: 883  IPNFYSVKEAVFPFAKFPGVDPILGPEMKSTGEVMGVGDTFGEAFAKAQMGASEVLPTGG 942

Query: 1043 TVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGD 1102
            T F+S+ D  KP +  +A+  +++GF+IV+T+GTA  +E  G+ V RV K+ EGRPH  D
Sbjct: 943  TAFISVRDDDKPLVAGVARDLINLGFEIVATAGTAKLIEAAGLKVRRVNKVTEGRPHVVD 1002

Query: 1103 MVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTV 1162
            M+ N ++ +++ T+ G      D   +RR  L +K+   TT++   A  EA++     TV
Sbjct: 1003 MIKNDEVTLIINTTEGRQ-SIADSYSIRRNALQHKIYCTTTIAAGEAICEALKFGPEKTV 1061

Query: 1163 TMTALQDF 1170
                LQD 
Sbjct: 1062 RR--LQDL 1067


>gi|374622752|ref|ZP_09695273.1| carbamoyl-phosphate synthase, large subunit [Ectothiorhodospira sp.
            PHS-1]
 gi|373941874|gb|EHQ52419.1| carbamoyl-phosphate synthase, large subunit [Ectothiorhodospira sp.
            PHS-1]
          Length = 1073

 Score = 1256 bits (3249), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 623/1080 (57%), Positives = 814/1080 (75%), Gaps = 26/1080 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILI+GAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIQSILIIGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
              YI P+  + V +++E+ERPDA+LPTMGGQTALN A+ LA +G LEK+GVELIGA  DA
Sbjct: 63   AVYIEPVEWKTVARIIERERPDAVLPTMGGQTALNCALDLARNGVLEKFGVELIGATEDA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I  AEDR+ F+QAM  IG+ +P + + N+ +E   +  EIG +P+IIRP+FT+GG+GGGI
Sbjct: 123  IDMAEDRERFRQAMDEIGLASPKAFMVNSWEEAQRVQPEIG-YPIIIRPSFTMGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EE+E I + GL  S  ++V VE+S+LGWKEYE+EV+RD ADN +IICSIEN+DPMG
Sbjct: 182  AYNREEYEEIVRRGLDLSPVNEVQVEESVLGWKEYEMEVVRDRADNCIIICSIENLDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ +R+ S+A++R+IGV+ GGSNVQFAVNP DG ++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQIMRNASLAVLRKIGVDTGGSNVQFAVNPEDGRLVVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKK-TPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VG++LD++ N+IT   TPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGFTLDELRNEITGGVTPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            F FEKFP ++  LTTQMKSVGEAMA+GRTFQESFQKALRSLE G  G      + +D + 
Sbjct: 362  FTFEKFPTAKAKLTTQMKSVGEAMAIGRTFQESFQKALRSLETGSDGLN----EMVDLNA 417

Query: 507  EQ----LKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLL 562
            E     ++  L    P+R+  +  A + G+ ++++HELS ID WFL Q +EL+D+E+ L 
Sbjct: 418  EDAESIIRSELADAGPERIWYVADAFRFGLTLEQVHELSRIDPWFLAQIQELVDIERDLK 477

Query: 563  TQSVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFE 622
            ++S+ ++ +   + +K+ GFSD+++A     TE+ VR  R  LG+ P YKRVD+CAAEF 
Sbjct: 478  SRSLKDLDRRTLFTIKQYGFSDRRLAKLLDETERTVRAYRHELGIHPVYKRVDSCAAEFA 537

Query: 623  ANTPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIM 682
            + T YMYS+Y+ ECE+ P+ ++K+++LGGGPNRIGQGIEFDYCC H + +++  GYETIM
Sbjct: 538  STTDYMYSTYEEECEANPSGREKIMVLGGGPNRIGQGIEFDYCCVHAALAMREDGYETIM 597

Query: 683  MNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYL 742
            +N NPETVSTDYDTSDRL+FEPLT+EDVL ++ LE+P+GII+QFGGQTPLKL+       
Sbjct: 598  VNCNPETVSTDYDTSDRLFFEPLTLEDVLEIVHLEKPKGIIIQFGGQTPLKLA------- 650

Query: 743  DEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIA 802
               R   A+G  ++   GT+PD ID AEDRERF  +I++L + QP    A+S  +A+  A
Sbjct: 651  ---RDLEAAGAPVI---GTTPDCIDLAEDRERFQQLIEKLELVQPPNRTARSVDEAVRHA 704

Query: 803  KEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVD 862
            + IGYPVVVRPSYVLGGRAMEIVY +  L  Y+ +AV+V  + PVL+D++L DA+E+DVD
Sbjct: 705  EAIGYPVVVRPSYVLGGRAMEIVYNEIDLRRYMRDAVKVSNDAPVLLDRFLDDAVEVDVD 764

Query: 863  ALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCG 922
            A+ D   +V+IGGIM+HIEQAGVHSGDSAC +P  ++S    + I     K+A  L V G
Sbjct: 765  AICDG-KDVLIGGIMQHIEQAGVHSGDSACSLPPYSLSMDLQNQIIEQVRKMALALGVVG 823

Query: 923  LMNCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEV 982
            LMN Q+AI     +++LE NPRASRTVPFVSKAIG PLAK AA  M+G+SL + G T+ V
Sbjct: 824  LMNTQFAIQRD-RIFVLEVNPRASRTVPFVSKAIGMPLAKIAARCMAGRSLVEQGATETV 882

Query: 983  IPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSG 1042
            +P + SVKEAV PF KF G D +LGPEM+STGEVMG+  +FP AFAK+Q+ AG KLP +G
Sbjct: 883  VPDYYSVKEAVFPFIKFPGVDPILGPEMKSTGEVMGMGRNFPEAFAKSQLGAGVKLPETG 942

Query: 1043 TVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGD 1102
              F+S+ ++ KP + ++AK     GF++++T GTA  LE  G+  ER+ K+ EGRPH  D
Sbjct: 943  KAFISVREVDKPGIIQVAKELAARGFELIATHGTAQALEAAGVTCERINKVTEGRPHIVD 1002

Query: 1103 MVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTV 1162
            M+ N +I +++ T+ G      D   +RR  L +KV   TT++GA A  +A+  L S+ V
Sbjct: 1003 MIKNDEISLIINTTEGKQA-IADSFTIRREALQHKVTYTTTLAGAYATVQALEYLDSDRV 1061


>gi|433676167|ref|ZP_20508315.1| carbamoyl-phosphate synthase large subunit [Xanthomonas translucens
            pv. translucens DSM 18974]
 gi|430818717|emb|CCP38584.1| carbamoyl-phosphate synthase large subunit [Xanthomonas translucens
            pv. translucens DSM 18974]
          Length = 1080

 Score = 1256 bits (3249), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 627/1071 (58%), Positives = 796/1071 (74%), Gaps = 27/1071 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTDL+ ILI+GAGPIVIGQACEFDYSG QACKAL++EGY V+L+NSNPATIMTDP +AD
Sbjct: 3    KRTDLKTILIIGAGPIVIGQACEFDYSGAQACKALRDEGYRVVLVNSNPATIMTDPNMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
              YI P+  + VE+++ KE+PDALLPTMGGQTALN A+ LA+ G LEKYGVELIGAK +A
Sbjct: 63   AVYIEPINWQTVEKIIAKEKPDALLPTMGGQTALNCALDLADHGVLEKYGVELIGAKREA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I  AEDR+LF+ AM  IG++ P + + +TL+E + I   +G +P IIRP+FTLGG+GGGI
Sbjct: 123  IMMAEDRELFRVAMGEIGLECPKAAVAHTLEEALEIQTRVG-YPTIIRPSFTLGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EE   I   GL  S TS+VLVE+S+LGWKE+E+EV+RD ADN +I+CSIEN+DPMG
Sbjct: 182  AYNREELIEIVGRGLELSPTSEVLVEESVLGWKEFEMEVVRDTADNCIIVCSIENLDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQRLRD SIA++R+IGV+ GGSNVQF +N   G V+VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQRLRDASIAVLRKIGVDTGGSNVQFGINAQTGRVVVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKK-TPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ N+IT   TPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGYTLDELKNEITGGLTPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDW-- 504
            FAFEKFP ++  LTTQMKSVGE MA+GR+F ES QKALR LE G  G   +    LD   
Sbjct: 362  FAFEKFPQADARLTTQMKSVGEVMAMGRSFSESLQKALRGLETGKIGLDPTG---LDLGS 418

Query: 505  --DWEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLL 562
              D   LK  L+ P P+R+  +  A + GM V+++H LSFID WFL Q ++LI  EQ L 
Sbjct: 419  EDDMAALKRELKAPGPERLFYVADAFRVGMSVEQVHALSFIDPWFLDQIEDLIAQEQRLA 478

Query: 563  TQSVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFE 622
               + ++       +KR GFSD ++A    + E  VR  R +  V P YKRVD+CAAEF 
Sbjct: 479  ADGLGSLDAARLRTLKRAGFSDARMAELCGTNEAAVRALRRAHKVRPVYKRVDSCAAEFA 538

Query: 623  ANTPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIM 682
             +T Y+YS+Y+ ECES P+ + K++ILGGGPNRIGQGIEFDYCC H + +L+  GYETIM
Sbjct: 539  TDTAYLYSTYEDECESRPSNRDKIMILGGGPNRIGQGIEFDYCCVHAALALREDGYETIM 598

Query: 683  MNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYL 742
            +N NPETVSTDYDTSDRLYFEPLT+EDVL +++LE+P+G+IVQ+GGQTPLKL+       
Sbjct: 599  VNCNPETVSTDYDTSDRLYFEPLTLEDVLEIVELEQPKGVIVQYGGQTPLKLA------- 651

Query: 743  DEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIA 802
               R   A+G   V + GTSPDSID AEDRERF  ++  L ++QP   IA++  +AL +A
Sbjct: 652  ---RALEANG---VPVIGTSPDSIDLAEDRERFQQLVDTLGLKQPPNRIARNAEEALVLA 705

Query: 803  KEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVD 862
            +EIGYP+VVRPSYVLGGRAMEIVY +  L  Y+ +AV+V  + PVL+D++L +A+E+DVD
Sbjct: 706  REIGYPLVVRPSYVLGGRAMEIVYGESDLARYVRDAVKVSNDSPVLLDRFLDNAVEVDVD 765

Query: 863  ALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCG 922
             +AD  G V+IGG+MEHIE+AGVHSGDS+C +P  ++S+     +    + LAK LNV G
Sbjct: 766  IIADRDGQVLIGGVMEHIEEAGVHSGDSSCSLPPYSLSAKTQAELRRQVVMLAKGLNVVG 825

Query: 923  LMNCQYAITT--SGD--VYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGF 978
            LMN Q+A+    +GD  V+LLE NPRASRTVPFVSKA G  LAK AA  M+GK+L + G 
Sbjct: 826  LMNTQFAVQVDEAGDDIVFLLEVNPRASRTVPFVSKATGMALAKIAARCMAGKTLAEQGA 885

Query: 979  TKEVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKL 1038
             KE++P + SVKEA+ PF KFQG D +LGPEMRSTGEVMG+  SF  AFA+AQ A G K 
Sbjct: 886  LKEIVPDYYSVKEAIFPFAKFQGVDPILGPEMRSTGEVMGVGRSFGAAFARAQEAGGIKA 945

Query: 1039 PLSGTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRP 1098
            P  G  FLS+ D  K  +  +A+A ++ G+ +V+TSGT  +L   G+  +++ K+ EGRP
Sbjct: 946  PPLGKAFLSVRDPDKQRVLPVAQALVERGYTLVATSGTCAWLRQHGLQCDQINKVAEGRP 1005

Query: 1099 HAGDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALA 1149
            H  D++ NG+I  +V T+ G +    D   +RR  L ++V   TTV+GA A
Sbjct: 1006 HIVDLIKNGEIVYIVNTTEGRAAIS-DSFSIRREALQHRVTYSTTVAGARA 1055



 Score =  251 bits (642), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 157/432 (36%), Positives = 239/432 (55%), Gaps = 24/432 (5%)

Query: 60  RVRASSAKIDS-SAELSNGAA----SSKDQKLGKRTDLRKILILGAGPIVIGQACEFDYS 114
           +VR    ++DS +AE +   A    + +D+   + ++  KI+ILG GP  IGQ  EFDY 
Sbjct: 522 KVRPVYKRVDSCAAEFATDTAYLYSTYEDECESRPSNRDKIMILGGGPNRIGQGIEFDYC 581

Query: 115 GTQACKALKEEGYEVILINSNPATIMTDPGLADRTYITPMTPELVEQVLEKERPDALLPT 174
              A  AL+E+GYE I++N NP T+ TD   +DR Y  P+T E V +++E E+P  ++  
Sbjct: 582 CVHAALALREDGYETIMVNCNPETVSTDYDTSDRLYFEPLTLEDVLEIVELEQPKGVIVQ 641

Query: 175 MGGQTALNLAVALAESGALEKYGVELIGAKLDAIKKAEDRDLFKQAMKTIGVKTPPSGIG 234
            GGQT L LA       ALE  GV +IG   D+I  AEDR+ F+Q + T+G+K PP+ I 
Sbjct: 642 YGGQTPLKLA------RALEANGVPVIGTSPDSIDLAEDRERFQQLVDTLGLKQPPNRIA 695

Query: 235 NTLDECISIANEIGEFPLIIRPAFTLGGTGGGIAYNKEEFEAICKAGLAASLTSQVLVEK 294
              +E + +A EIG +PL++RP++ LGG    I Y + +     +  +  S  S VL+++
Sbjct: 696 RNAEEALVLAREIG-YPLVVRPSYVLGGRAMEIVYGESDLARYVRDAVKVSNDSPVLLDR 754

Query: 295 SLLGWKEYELEVMRDLADNVVIICSIENVDPMGVHTGDSITVAPAQTLTDKEYQRLRDYS 354
            L    E +++++ D    V+I   +E+++  GVH+GDS    P  +L+ K    LR   
Sbjct: 755 FLDNAVEVDVDIIADRDGQVLIGGVMEHIEEAGVHSGDSSCSLPPYSLSAKTQAELRRQV 814

Query: 355 IAIIREIGVECGGSNVQFAVN---PVDGEVMVIEMNPRVSRSSALASKATGFPIAKMAAK 411
           + + + + V  G  N QFAV      D  V ++E+NPR SR+    SKATG  +AK+AA+
Sbjct: 815 VMLAKGLNV-VGLMNTQFAVQVDEAGDDIVFLLEVNPRASRTVPFVSKATGMALAKIAAR 873

Query: 412 LSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRFAFEKFPGSEPLLTTQMKSVGEAMA 471
              G +L         +  A  E   DY   K   F F KF G +P+L  +M+S GE M 
Sbjct: 874 CMAGKTL--------AEQGALKEIVPDYYSVKEAIFPFAKFQGVDPILGPEMRSTGEVMG 925

Query: 472 LGRTFQESFQKA 483
           +GR+F  +F +A
Sbjct: 926 VGRSFGAAFARA 937


>gi|425897469|ref|ZP_18874060.1| carbamoyl-phosphate synthase, large subunit [Pseudomonas chlororaphis
            subsp. aureofaciens 30-84]
 gi|397892169|gb|EJL08647.1| carbamoyl-phosphate synthase, large subunit [Pseudomonas chlororaphis
            subsp. aureofaciens 30-84]
          Length = 1073

 Score = 1256 bits (3249), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 631/1088 (57%), Positives = 799/1088 (73%), Gaps = 28/1088 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILILGAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPAMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  + V +++EKERPDALLPTMGGQTALN A+ L   G LEK+GVE+IGA  D 
Sbjct: 63   ATYIEPIKWQTVAKIIEKERPDALLPTMGGQTALNCALDLEREGVLEKFGVEMIGANADT 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  F  AMK IG++ P SGI +++DE  ++  ++G FP IIRP+FT+GGTGGGI
Sbjct: 123  IDKAEDRSRFDTAMKAIGLECPRSGIAHSMDEANAVLEKLG-FPCIIRPSFTMGGTGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEFE IC  GL  S T ++L+++SL+GWKEYE+EV+RD  DN +I+CSIEN DPMG
Sbjct: 182  AYNREEFEEICARGLDLSPTKELLIDESLIGWKEYEMEVVRDKKDNCIIVCSIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ LR+ S+A++REIGVE GGSNVQF + P  G ++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQILRNASLAVLREIGVETGGSNVQFGICPNTGRMVVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT  KTPASFEPSIDYVVTK+PR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGYTLDELSNDITGGKTPASFEPSIDYVVTKLPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDW-- 504
            FAFEKF  ++  LTTQMKSVGE MA+GRTFQES QKALR LE G  G       +LD   
Sbjct: 362  FAFEKFAKADARLTTQMKSVGEVMAIGRTFQESLQKALRGLEVGVCGLD----PKLDLGN 417

Query: 505  --DWEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLL 562
                  LK  L VP  +R+  +  A + GM V++I  ++ ID WFL Q ++LI  E+ + 
Sbjct: 418  PESMNVLKRELTVPGAERIWYVADAFRAGMTVEQIFGMNMIDPWFLVQIEDLIKEEEKVK 477

Query: 563  TQSVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFE 622
            T  +S + +D  + +KR+GFSD+++A     TEK +R  R  L V P YKRVDTCAAEF 
Sbjct: 478  TLGLSAIDRDLMFRLKRKGFSDQRLAKLLGVTEKNLRTHRHKLEVFPVYKRVDTCAAEFA 537

Query: 623  ANTPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIM 682
             +T Y+YS+Y+ ECE+AP+ + K++ILGGGPNRIGQGIEFDYCC H + +L+  GYETIM
Sbjct: 538  TDTAYLYSTYEEECEAAPSGRDKIMILGGGPNRIGQGIEFDYCCVHAALALRDDGYETIM 597

Query: 683  MNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYL 742
            +N NPETVSTDYDTSDRLYFEP+T+EDVL ++ +E+P+G+IVQ+GGQTPLKL+       
Sbjct: 598  VNCNPETVSTDYDTSDRLYFEPVTLEDVLEIVRVEKPKGVIVQYGGQTPLKLA------- 650

Query: 743  DEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIA 802
               R   A+G   V I GTSPD+ID AEDRERF  +++ L++ QP     +SE +A+  A
Sbjct: 651  ---RALEAAG---VPIIGTSPDAIDRAEDRERFQQMVERLNLRQPPNATVRSEDEAIRAA 704

Query: 803  KEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVD 862
             +IGYP+VVRPSYVLGGRAMEIVY +E L  YL  AV+V  + PVL+D +L+ AIE+DVD
Sbjct: 705  AKIGYPLVVRPSYVLGGRAMEIVYEEEELKRYLREAVQVSNDSPVLLDHFLNCAIEMDVD 764

Query: 863  ALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCG 922
            A+ D   +VVIG IM+HIEQAGVHSGDSAC +P  ++ +   D +     K+A  L V G
Sbjct: 765  AVCDG-KDVVIGAIMQHIEQAGVHSGDSACSLPPYSLPAHIQDEMREQVKKMALELGVVG 823

Query: 923  LMNCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEV 982
            LMN Q A+     +Y++E NPRASRTVPFVSK IG  LA  AA VM+GK+L +LGFTKE+
Sbjct: 824  LMNVQLALQGE-QIYVIEVNPRASRTVPFVSKCIGVSLAMIAARVMAGKTLKELGFTKEI 882

Query: 983  IPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSG 1042
            IP   SVKEAV PF KF G D +LGPEM+STGEVMG+  +F  AFAKAQ+ A + LP  G
Sbjct: 883  IPNFYSVKEAVFPFAKFPGVDPILGPEMKSTGEVMGVGDTFGEAFAKAQMGASEVLPTGG 942

Query: 1043 TVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGD 1102
            T F+S+ D  KP +  +A+  +++GF++V+T+GTA  +E  G+ V RV K+ EGRPH  D
Sbjct: 943  TAFISVRDDDKPLVAGVARDLINLGFEVVATAGTAKLIEAAGLKVRRVNKVTEGRPHVVD 1002

Query: 1103 MVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTV 1162
            M+ N ++ +++ T+ G      D   +RR  L +K+   TT++   A  EA++     TV
Sbjct: 1003 MIKNDEVTLIINTTEGRQ-SIADSYSIRRNALQHKIYCTTTIAAGEAICEALKFGPEKTV 1061

Query: 1163 TMTALQDF 1170
                LQD 
Sbjct: 1062 RR--LQDL 1067


>gi|422650881|ref|ZP_16713681.1| carbamoyl phosphate synthase large subunit [Pseudomonas syringae pv.
            actinidiae str. M302091]
 gi|330963964|gb|EGH64224.1| carbamoyl phosphate synthase large subunit [Pseudomonas syringae pv.
            actinidiae str. M302091]
          Length = 1073

 Score = 1255 bits (3248), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 629/1088 (57%), Positives = 799/1088 (73%), Gaps = 28/1088 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILILGAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPAMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  + V +++EKERPDALLPTMGGQTALN A+ L   G LEK+GVE+IGA  D 
Sbjct: 63   ATYIEPIKWQTVAKIIEKERPDALLPTMGGQTALNCALDLEREGVLEKFGVEMIGANADT 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  F +AMK+IG+  P SGI ++++E  ++  ++G FP IIRP+FT+GGTGGGI
Sbjct: 123  IDKAEDRSRFDKAMKSIGLACPRSGIAHSMEEANAVLEKLG-FPCIIRPSFTMGGTGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEFE IC  GL  S T ++L+++SL+GWKEYE+EV+RD  DN +I+CSIEN DPMG
Sbjct: 182  AYNREEFEEICARGLDLSPTKELLIDESLIGWKEYEMEVVRDKKDNCIIVCSIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ LR+ S+A++REIGVE GGSNVQF + P  G ++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQILRNASLAVLREIGVETGGSNVQFGICPDTGRMVVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIA++AAKL+VGY+LD++ N+IT  KTPASFEPSIDYVVTK+PR
Sbjct: 302  PRVSRSSALASKATGFPIARVAAKLAVGYTLDELSNEITGGKTPASFEPSIDYVVTKLPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            FAFEKF  ++  LTTQMKSVGE MA+GRTFQES QKALR LE G  G       +LD   
Sbjct: 362  FAFEKFAKADARLTTQMKSVGEVMAIGRTFQESLQKALRGLEVGVCGLD----PKLDLSH 417

Query: 507  EQ----LKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLL 562
             +    LK  L VP  +R+  +  A + GM V+EI  ++ ID WFL Q ++L+  E+ + 
Sbjct: 418  PESMSTLKRELTVPGAERIWYVADAFRAGMTVEEIFAMNMIDPWFLVQIEDLVKDEEKIK 477

Query: 563  TQSVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFE 622
            T  +S + +D  Y +KR+GFSD ++A     TEK +R  R  L V P YKRVDTCAAEF 
Sbjct: 478  TLGLSAIDRDLMYRLKRKGFSDARLAKLVGVTEKNLRTHRHKLDVFPVYKRVDTCAAEFA 537

Query: 623  ANTPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIM 682
             +T Y+YS+Y+ ECE+ P+ + K++ILGGGPNRIGQGIEFDYCC H + +L+  GYETIM
Sbjct: 538  TDTAYLYSTYEEECEANPSTRDKIMILGGGPNRIGQGIEFDYCCVHAALALREDGYETIM 597

Query: 683  MNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYL 742
            +N NPETVSTDYDTSDRLYFEP+T+EDVL ++ +E+P+G+IVQ+GGQTPLKL+       
Sbjct: 598  VNCNPETVSTDYDTSDRLYFEPVTLEDVLEIVRVEKPKGVIVQYGGQTPLKLA------- 650

Query: 743  DEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIA 802
               R   A+G   V I GTSPD+ID AEDRERF  +++ L++ QP     +SE +A+  A
Sbjct: 651  ---RALEAAG---VPIIGTSPDAIDRAEDRERFQQMVERLNLRQPPNATVRSEDEAIRAA 704

Query: 803  KEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVD 862
              IGYP+VVRPSYVLGGRAMEIVY ++ L  YL  AV+V  + PVL+D +L+ AIE+DVD
Sbjct: 705  ARIGYPLVVRPSYVLGGRAMEIVYQEDELKRYLREAVQVSNDSPVLLDHFLNCAIEMDVD 764

Query: 863  ALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCG 922
            A+ D   +VVIG IM+HIEQAGVHSGDSAC +P  ++ +   D +     K+A  L V G
Sbjct: 765  AVCDGT-DVVIGAIMQHIEQAGVHSGDSACSLPPYSLPAHIQDEMREQVKKMALELGVVG 823

Query: 923  LMNCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEV 982
            LMN Q A+    D+Y++E NPRASRTVPFVSK IG  LA  AA VM+GK+L +L FTKE+
Sbjct: 824  LMNVQLALQGE-DIYVIEVNPRASRTVPFVSKCIGVSLAMIAARVMAGKTLKELNFTKEI 882

Query: 983  IPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSG 1042
            IP   SVKEAV PF KF G D +LGPEM+STGEVMG+  +F  AFAKAQ+ A + LP  G
Sbjct: 883  IPSFYSVKEAVFPFAKFPGVDPILGPEMKSTGEVMGVGDTFGEAFAKAQMGASEVLPTGG 942

Query: 1043 TVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGD 1102
            T F+S+ D  KP +E +A+  +++GF+IV+T+GTA  +E  G+ V RV K+ EGRPH  D
Sbjct: 943  TAFISVRDDDKPLVEAVARDLINLGFEIVATAGTAKLIEAAGLKVRRVNKVTEGRPHVVD 1002

Query: 1103 MVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTV 1162
            M+ N ++ +++ T+ G      D   +RR  L +K+   TT++   A  EA++     TV
Sbjct: 1003 MIKNDEVTLIINTTEGRQ-SIADSYSIRRNALQHKIYCTTTIAAGEAICEALKFGPEKTV 1061

Query: 1163 TMTALQDF 1170
                LQD 
Sbjct: 1062 RR--LQDL 1067


>gi|298157070|gb|EFH98159.1| Carbamoyl-phosphate synthase large chain [Pseudomonas savastanoi pv.
            savastanoi NCPPB 3335]
          Length = 1073

 Score = 1255 bits (3248), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 628/1088 (57%), Positives = 800/1088 (73%), Gaps = 28/1088 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILILGAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPAMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  + V +++EKERPDALLPTMGGQTALN A+ L   G LEK+GVE+IGA  D 
Sbjct: 63   ATYIEPIKWQTVAKIIEKERPDALLPTMGGQTALNCALDLEREGVLEKFGVEMIGANADT 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  F +AMK+IG+  P SGI ++++E  ++  ++G FP IIRP+FT+GGTGGGI
Sbjct: 123  IDKAEDRSRFDKAMKSIGLACPRSGIAHSMEEANAVLEKLG-FPCIIRPSFTMGGTGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEFE IC  GL  S T ++L+++SL+GWKEYE+EV+RD  DN +I+CSIEN DPMG
Sbjct: 182  AYNREEFEEICARGLDLSPTKELLIDESLIGWKEYEMEVVRDKKDNCIIVCSIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ LR+ S+A++REIGVE GGSNVQF + P  G ++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQILRNASLAVLREIGVETGGSNVQFGICPDTGRMVVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIA++AAKL+VGY+LD++ N+IT  KTPASFEPSIDYVVTK+PR
Sbjct: 302  PRVSRSSALASKATGFPIARVAAKLAVGYTLDELSNEITGGKTPASFEPSIDYVVTKLPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            FAFEKF  ++  LTTQMKSVGE MA+GRTFQES QKALR LE G  G       +LD   
Sbjct: 362  FAFEKFAKADARLTTQMKSVGEVMAIGRTFQESLQKALRGLEVGVCGLD----PKLDLSH 417

Query: 507  EQ----LKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLL 562
             +    LK  L VP  +R+  +  A + GM V+EI  ++ ID WFL Q ++L+  E+ + 
Sbjct: 418  PESMSTLKRELTVPGAERIWYVADAFRAGMTVEEIFAMNMIDSWFLVQIEDLVKDEEKVK 477

Query: 563  TQSVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFE 622
            T  +S + +D  + +KR+GFSD ++A     TEK +R  R  L V P YKRVDTCAAEF 
Sbjct: 478  TLGLSAIDRDLMFRLKRKGFSDARLAKLVGVTEKNLRTHRHKLDVFPVYKRVDTCAAEFA 537

Query: 623  ANTPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIM 682
             +T Y+YS+Y+ ECE+ P+ + K++ILGGGPNRIGQGIEFDYCC H + +L+  GYETIM
Sbjct: 538  TDTAYLYSTYEEECEANPSTRDKIMILGGGPNRIGQGIEFDYCCVHAALALREDGYETIM 597

Query: 683  MNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYL 742
            +N NPETVSTDYDTSDRLYFEP+T+EDVL ++ +E+P+G+IVQ+GGQTPLKL+       
Sbjct: 598  VNCNPETVSTDYDTSDRLYFEPVTLEDVLEIVRVEKPKGVIVQYGGQTPLKLA------- 650

Query: 743  DEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIA 802
               R   A+G   V I GTSPD+ID AEDRERF  +++ L++ QP     +SE +A+  A
Sbjct: 651  ---RALEAAG---VPIIGTSPDAIDRAEDRERFQQMVERLNLRQPPNATVRSEDEAIRAA 704

Query: 803  KEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVD 862
             +IGYP+VVRPSYVLGGRAMEIVY ++ L  YL  AV+V  + PVL+D +L+ AIE+DVD
Sbjct: 705  AKIGYPLVVRPSYVLGGRAMEIVYQEDELKRYLREAVQVSNDSPVLLDHFLNCAIEMDVD 764

Query: 863  ALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCG 922
            A+ D   +VVIG IM+HIEQAGVHSGDSAC +P  ++ +   D +     K+A  L V G
Sbjct: 765  AVCDGT-DVVIGAIMQHIEQAGVHSGDSACSLPPYSLPAHIQDEMREQVKKMALELGVVG 823

Query: 923  LMNCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEV 982
            LMN Q A+    D+Y++E NPRASRTVPFVSK IG  LA  AA VM+GK+L +L FTKE+
Sbjct: 824  LMNVQLALQGE-DIYVIEVNPRASRTVPFVSKCIGVSLAMVAARVMAGKTLKELNFTKEI 882

Query: 983  IPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSG 1042
            IP   SVKEAV PF KF G D +LGPEM+STGEVMG+  +F  AFAKAQ+ A + LP  G
Sbjct: 883  IPNFYSVKEAVFPFAKFPGVDPILGPEMKSTGEVMGVGDTFGEAFAKAQMGASEVLPTGG 942

Query: 1043 TVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGD 1102
            T F+S+ D  KP +E +A+  +++GF+IV+T+GTA  +E  G+ V RV K+ EGRPH  D
Sbjct: 943  TAFISVRDDDKPLVEAVARDLINLGFEIVATAGTAKLIEAAGLKVRRVNKVTEGRPHVVD 1002

Query: 1103 MVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTV 1162
            M+ N ++ +++ T+ G      D   +RR  L +K+   TT++   A  EA++     TV
Sbjct: 1003 MIKNDEVTLIINTTEGRQ-SIADSYSIRRNALQHKIYCTTTIAAGEAICEALKFGPEKTV 1061

Query: 1163 TMTALQDF 1170
                LQD 
Sbjct: 1062 RR--LQDL 1067


>gi|440742413|ref|ZP_20921738.1| carbamoyl phosphate synthase large subunit [Pseudomonas syringae
            BRIP39023]
 gi|440377250|gb|ELQ13899.1| carbamoyl phosphate synthase large subunit [Pseudomonas syringae
            BRIP39023]
          Length = 1073

 Score = 1255 bits (3248), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 629/1088 (57%), Positives = 800/1088 (73%), Gaps = 28/1088 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILILGAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPAMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  + V +++EKERPDALLPTMGGQTALN A+ L   G LEK+GVE+IGA  D 
Sbjct: 63   ATYIEPIKWQTVAKIIEKERPDALLPTMGGQTALNCALDLEREGVLEKFGVEMIGANADT 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  F +AMK+IG+  P SGI ++++E  ++  ++G FP IIRP+FT+GGTGGGI
Sbjct: 123  IDKAEDRSRFDKAMKSIGLACPRSGIAHSMEEANAVLEKLG-FPCIIRPSFTMGGTGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEFE IC  GL  S T ++L+++SL+GWKEYE+EV+RD  DN +I+CSIEN DPMG
Sbjct: 182  AYNREEFEEICARGLDLSPTKELLIDESLIGWKEYEMEVVRDKKDNCIIVCSIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ LR+ S+A++REIGVE GGSNVQF + P  G ++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQILRNASLAVLREIGVETGGSNVQFGICPNTGRMVVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIA++AAKL+VGY+LD++ N+IT  KTPASFEPSIDYVVTK+PR
Sbjct: 302  PRVSRSSALASKATGFPIARVAAKLAVGYTLDELSNEITGGKTPASFEPSIDYVVTKLPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            FAFEKF  ++  LTTQMKSVGE MA+GRTFQES QKALR LE G  G       +LD   
Sbjct: 362  FAFEKFAKADARLTTQMKSVGEVMAIGRTFQESLQKALRGLEVGVCGLD----PKLDLSH 417

Query: 507  EQ----LKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLL 562
             +    LK  L VP  +R+  +  A + GM V+EI  ++ ID WFL Q ++LI  E+ + 
Sbjct: 418  PESMSTLKRELTVPGAERIWYVADAFRAGMTVEEIFAMNMIDPWFLVQIEDLIKDEEKIK 477

Query: 563  TQSVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFE 622
            T  +S + +D  + +KR+GFSD ++A     TEK +R  R  L V P YKRVDTCAAEF 
Sbjct: 478  TLGLSAIDRDLMFRLKRKGFSDARLAKLLGVTEKNLRTHRHKLEVFPVYKRVDTCAAEFA 537

Query: 623  ANTPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIM 682
             +T Y+YS+Y+ ECE+ P+ + K++ILGGGPNRIGQGIEFDYCC H + +L+  GYETIM
Sbjct: 538  TDTAYLYSTYEEECEANPSTRDKIMILGGGPNRIGQGIEFDYCCVHAALALREDGYETIM 597

Query: 683  MNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYL 742
            +N NPETVSTDYDTSDRLYFEP+T+EDVL ++ +E+P+G+IVQ+GGQTPLKL+       
Sbjct: 598  VNCNPETVSTDYDTSDRLYFEPVTLEDVLEIVRVEKPKGVIVQYGGQTPLKLA------- 650

Query: 743  DEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIA 802
               R   A+G   V I GTSPD+ID AEDRERF  +++ L++ QP     +SE +A+  A
Sbjct: 651  ---RALEAAG---VPIIGTSPDAIDRAEDRERFQHMVERLNLRQPPNATVRSEDEAIRAA 704

Query: 803  KEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVD 862
             +IGYP+VVRPSYVLGGRAMEIVY ++ L  YL  AV+V  + PVL+D +L+ AIE+DVD
Sbjct: 705  AKIGYPLVVRPSYVLGGRAMEIVYQEDELKRYLREAVQVSNDSPVLLDHFLNCAIEMDVD 764

Query: 863  ALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCG 922
            A+ D   +VVIG IM+HIEQAGVHSGDSAC +P  ++ +   D +     K+A  L V G
Sbjct: 765  AVCDGT-DVVIGAIMQHIEQAGVHSGDSACSLPPYSLPAHIQDEMREQVKKMALELGVVG 823

Query: 923  LMNCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEV 982
            LMN Q A+    D+Y++E NPRASRTVPFVSK IG  LA  AA VM+GK+L +L FTKE+
Sbjct: 824  LMNVQLALQGE-DIYVIEVNPRASRTVPFVSKCIGVSLAMVAARVMAGKTLKELNFTKEI 882

Query: 983  IPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSG 1042
            IP   SVKEAV PF KF G D +LGPEM+STGEVMG+  +F  AFAKAQ+ A + LP  G
Sbjct: 883  IPNFYSVKEAVFPFAKFPGVDPILGPEMKSTGEVMGVGDTFGEAFAKAQMGASEVLPTGG 942

Query: 1043 TVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGD 1102
            T F+S+ D  KP +E +A+  +++GF+IV+T+GTA  +E  G+ V RV K+ EGRPH  D
Sbjct: 943  TAFISVRDDDKPLVEAVARDLINLGFEIVATAGTAKLIEAAGLKVRRVNKVTEGRPHVVD 1002

Query: 1103 MVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTV 1162
            M+ N ++ +++ T+ G      D   +RR  L +K+   TT++   A  EA++     TV
Sbjct: 1003 MIKNDEVTLIINTTEGRQ-SIADSYSIRRNALQHKIYCTTTIAAGEAICEALKFGPEKTV 1061

Query: 1163 TMTALQDF 1170
                LQD 
Sbjct: 1062 RR--LQDL 1067


>gi|421502064|ref|ZP_15949020.1| carbamoyl phosphate synthase large subunit [Pseudomonas mendocina
            DLHK]
 gi|400347348|gb|EJO95702.1| carbamoyl phosphate synthase large subunit [Pseudomonas mendocina
            DLHK]
          Length = 1073

 Score = 1255 bits (3248), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 625/1088 (57%), Positives = 807/1088 (74%), Gaps = 28/1088 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILILGAGPIVIGQACEFDYSG QACKALKEEG+ VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIKSILILGAGPIVIGQACEFDYSGAQACKALKEEGFRVILVNSNPATIMTDPAMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+    V +++EKERPDALLPTMGGQTALN A+ L   G LEK+GVE+IGA  D 
Sbjct: 63   ATYIEPIKWATVAKIIEKERPDALLPTMGGQTALNCALDLERHGVLEKFGVEMIGANADT 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  F +AMK IG+  P SGI ++++E   +   +G FP IIRP+FT+GGTGGGI
Sbjct: 123  IDKAEDRSRFDKAMKDIGLACPRSGIAHSMEEAYGVLEMVG-FPCIIRPSFTMGGTGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEFE IC  GL  S T+++L+++SL+GWKEYE+EV+RD  DN +I+CSIEN DPMG
Sbjct: 182  AYNREEFEEICARGLDLSPTNELLIDESLIGWKEYEMEVVRDKKDNCIIVCSIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGVE GGSNVQF + P  G ++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQIMRNASLAVLREIGVETGGSNVQFGICPNTGRMVVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT  +TPASFEP+IDYVVTK+PR
Sbjct: 302  PRVSRSSALASKATGFPIAKIAAKLAVGYTLDELSNDITGGRTPASFEPAIDYVVTKVPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            FAFEKFP ++  LTTQMKSVGE MA+GRTFQES QKALR LE G +G+      +LD + 
Sbjct: 362  FAFEKFPKADARLTTQMKSVGEVMAIGRTFQESVQKALRGLEVGVAGFD----PKLDLND 417

Query: 507  EQLKYSLR----VPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLL 562
             + + +LR    VP+ DR+  +  A + G  V E+ EL+ ID+WFL Q ++L+  E+ + 
Sbjct: 418  PEAESTLRRELTVPSADRIWYVADAFRAGKTVAEVFELTRIDEWFLVQIEDLVKDEEKVK 477

Query: 563  TQSVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFE 622
            T  +S +  D  +++KR+GFSD ++A     +EK +R  R  L V+P YKRVDTCAAEF 
Sbjct: 478  TLGLSAIDYDLMFKLKRKGFSDARLAKLLGVSEKSLRAHRHKLKVLPVYKRVDTCAAEFA 537

Query: 623  ANTPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIM 682
             +T YMYS+Y+ ECE+ P+ + K++ILGGGPNRIGQGIEFDYCC H + +++  GYETIM
Sbjct: 538  TDTAYMYSTYEEECEANPSSRDKIMILGGGPNRIGQGIEFDYCCVHAALAMREDGYETIM 597

Query: 683  MNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYL 742
            +N NPETVSTDYDTSDRLYFEP+T+EDVL ++ +E+P+G+IVQ+GGQTPLK    I + L
Sbjct: 598  VNCNPETVSTDYDTSDRLYFEPVTLEDVLEIVRVEQPKGVIVQYGGQTPLK----ICRAL 653

Query: 743  DEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIA 802
            +E  +P         I GTSP++ID AEDRERF  +++ L++ QP    A+SE +ALA++
Sbjct: 654  EEAGVP---------IIGTSPEAIDRAEDRERFQQMVQRLNLRQPANATARSEDEALALS 704

Query: 803  KEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVD 862
            K IGYP+VVRPSYVLGGRAMEIVY +E L  Y+  AV+V  + PVL+D++L+ AIE+DVD
Sbjct: 705  KGIGYPMVVRPSYVLGGRAMEIVYQEEELKRYMREAVKVSNDSPVLLDRFLNCAIEVDVD 764

Query: 863  ALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCG 922
            A++D    VVIG IM+HIEQAGVHSGDSAC +P  ++ +   D I     K+A  L V G
Sbjct: 765  AVSDG-ETVVIGAIMQHIEQAGVHSGDSACSLPPYSLPAHIQDEIREQVKKMALELGVIG 823

Query: 923  LMNCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEV 982
            LMN Q A+    D+Y++E NPRASRTVPFVSK +G  LAK AA VM+GK+L ++G+TKE+
Sbjct: 824  LMNVQMAVQGE-DIYVIEVNPRASRTVPFVSKCVGESLAKVAARVMAGKTLAEVGYTKEI 882

Query: 983  IPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSG 1042
            IP   SVKEAV PF KF G D +LGPEM+STGEVMG+  SF  AFAKAQ+ A + LP SG
Sbjct: 883  IPPFFSVKEAVFPFAKFPGVDPILGPEMKSTGEVMGVGDSFGEAFAKAQLGASEILPNSG 942

Query: 1043 TVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGD 1102
              F+S+ +  K    ++A+  + +GF++V+T+GTA  +E  G+ V RV K+ EGRPH  D
Sbjct: 943  CAFISVREDDKAEAVQVARDLVSLGFEVVATAGTAKVIEAAGLPVRRVNKVTEGRPHVVD 1002

Query: 1103 MVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTV 1162
            M+ N ++ +++ T+ G      D   +RR  L +K+   TT++   A  EA++     TV
Sbjct: 1003 MIKNDEVTLIINTTEGRQ-SIADSYSIRRNALQHKIYCTTTIAAGQAVCEALKFGPEKTV 1061

Query: 1163 TMTALQDF 1170
                LQD 
Sbjct: 1062 RR--LQDL 1067


>gi|262369444|ref|ZP_06062772.1| carbamoyl-phosphate synthase [Acinetobacter johnsonii SH046]
 gi|262315512|gb|EEY96551.1| carbamoyl-phosphate synthase [Acinetobacter johnsonii SH046]
          Length = 1077

 Score = 1255 bits (3247), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 621/1075 (57%), Positives = 791/1075 (73%), Gaps = 24/1075 (2%)

Query: 86   LGKRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGL 145
            + KRTD++ ILI+GAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +
Sbjct: 1    MAKRTDIKSILIIGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPAM 60

Query: 146  ADRTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKL 205
            AD TYI P+T + V Q++EKERPDA+LPTMGGQTALN A+AL  +G LEKY VELIGA  
Sbjct: 61   ADATYIEPITWQTVAQIIEKERPDAVLPTMGGQTALNCALALDANGILEKYNVELIGATK 120

Query: 206  DAIKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGG 265
            +AI+KAEDR LF +AM+ IG++ P + I   ++E + I    G FP+IIRP+FT+GG+GG
Sbjct: 121  EAIEKAEDRKLFDEAMRKIGLECPKAAIAENMEEALEIQARFG-FPVIIRPSFTMGGSGG 179

Query: 266  GIAYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDP 325
            GIAYNKEEF  IC+ G   S T Q+L+++SL+GWKEYE+EV+RD  DN +I+C+IEN DP
Sbjct: 180  GIAYNKEEFLEICERGFDLSPTKQLLIDESLIGWKEYEMEVVRDKNDNCIIVCAIENFDP 239

Query: 326  MGVHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIE 385
            MGVHTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGVE GGSNVQF + P  G +++IE
Sbjct: 240  MGVHTGDSITVAPAQTLTDKEYQLMRNASLAVLREIGVETGGSNVQFGICPDTGRMVIIE 299

Query: 386  MNPRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITK-KTPASFEPSIDYVVTKI 444
            MNPRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT   TPASFEP+IDYVVTKI
Sbjct: 300  MNPRVSRSSALASKATGFPIAKIAAKLAVGYTLDELKNDITGGTTPASFEPAIDYVVTKI 359

Query: 445  PRFAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDW 504
            PRF FEKFP ++  LTTQMKSVGE MA+GR FQES  KALR LE G  G+        + 
Sbjct: 360  PRFNFEKFPQADATLTTQMKSVGEVMAIGRNFQESVNKALRGLEVGACGFDEKIAVGTEG 419

Query: 505  DWEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQ 564
              E++   L+VP P+R+  +  A + G  ++++ + + IDKWFL Q +++I  E  + T 
Sbjct: 420  AKEKILVELKVPGPERIWYVADAFRHGFTLEDVFQATKIDKWFLIQIEDIIKTENEIKTL 479

Query: 565  SVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEAN 624
               ++  D+    KR+G SD +IA     ++K+ R+ R +LGV P YKRVDTCAAEFE++
Sbjct: 480  GFGDLNADNIRSFKRKGLSDLRIANLMGISQKQFRKHRWNLGVTPVYKRVDTCAAEFESD 539

Query: 625  TPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMN 684
            T YMYS+YD ECES P+ K K++++GGGPNRIGQGIEFDYCC H + +++  GYETIM+N
Sbjct: 540  TAYMYSTYDDECESNPSDKDKIMVIGGGPNRIGQGIEFDYCCVHAALAMREDGYETIMVN 599

Query: 685  SNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDE 744
             NPETVSTDYDTSDRLYFEP+T+EDVL ++  E+P+GIIVQ+GGQTPLKL+    + L+E
Sbjct: 600  CNPETVSTDYDTSDRLYFEPITLEDVLEIVRTEKPKGIIVQYGGQTPLKLA----RALEE 655

Query: 745  HRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKE 804
               P         I GTSPD+ID AEDRERF  +I+ L + QP   I KS  + +A A +
Sbjct: 656  AGAP---------IIGTSPDAIDRAEDRERFQQMIQRLQLRQPNNSIVKSAEEGMAEASK 706

Query: 805  IGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDAL 864
            +GYP+VVRPSYVLGGRAMEIVY D+ L  YL +AV+   E PVL+D++L DAIE+DVD +
Sbjct: 707  VGYPLVVRPSYVLGGRAMEIVYNDDELKRYLRDAVQASNEAPVLLDRFLDDAIEVDVDCV 766

Query: 865  ADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLM 924
            +D   +VVIGGIM+HIEQAG+HSGDSAC IP  ++S    D +   T+ +AK L V GLM
Sbjct: 767  SDG-KDVVIGGIMQHIEQAGIHSGDSACSIPPYSLSVEIQDEMRRQTVAMAKELGVVGLM 825

Query: 925  NCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIP 984
            N Q+A+    DVY+LE NPRASRTVPFVSK IG  LAK AA  M+G+SL   GFTKE+IP
Sbjct: 826  NVQFAVKGE-DVYILEVNPRASRTVPFVSKCIGESLAKVAARCMAGQSLESQGFTKEIIP 884

Query: 985  KHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQK---LPLS 1041
             H SVKEAV PF KF G D +LGPEM+STGEVMG+  +F  AF KA + + ++   LP  
Sbjct: 885  THFSVKEAVFPFNKFPGVDPILGPEMKSTGEVMGVGKTFGEAFYKAVLGSNERVPGLPTE 944

Query: 1042 GTV---FLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRP 1098
            G V   F+S+ D  KP    IAK  +  GFK+++T GT  F++  GI  ERV K+ EGRP
Sbjct: 945  GEVKHAFISVRDSDKPRAVGIAKQLVGFGFKVLATGGTYEFIKAAGIECERVNKVTEGRP 1004

Query: 1099 HAGDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEA 1153
            +  D + NG++ +++ T+ G    Q D   +RR  L  KV   TT++GA A  +A
Sbjct: 1005 NIVDRLKNGEVHLIINTTEGKQAQQ-DSFSIRRSALQAKVYNTTTLNGADAVCQA 1058


>gi|66047418|ref|YP_237259.1| carbamoyl phosphate synthase large subunit [Pseudomonas syringae pv.
            syringae B728a]
 gi|289676013|ref|ZP_06496903.1| carbamoyl phosphate synthase large subunit [Pseudomonas syringae pv.
            syringae FF5]
 gi|422629059|ref|ZP_16694265.1| carbamoyl phosphate synthase large subunit [Pseudomonas syringae pv.
            pisi str. 1704B]
 gi|422671901|ref|ZP_16731266.1| carbamoyl phosphate synthase large subunit [Pseudomonas syringae pv.
            aceris str. M302273]
 gi|424069357|ref|ZP_17806803.1| carbamoyl-phosphate synthase, large subunit [Pseudomonas syringae pv.
            avellanae str. ISPaVe013]
 gi|424073742|ref|ZP_17811157.1| carbamoyl-phosphate synthase, large subunit [Pseudomonas syringae pv.
            avellanae str. ISPaVe037]
 gi|63258125|gb|AAY39221.1| carbamoyl-phosphate synthase large subunit [Pseudomonas syringae pv.
            syringae B728a]
 gi|330937935|gb|EGH41722.1| carbamoyl phosphate synthase large subunit [Pseudomonas syringae pv.
            pisi str. 1704B]
 gi|330969640|gb|EGH69706.1| carbamoyl phosphate synthase large subunit [Pseudomonas syringae pv.
            aceris str. M302273]
 gi|407994924|gb|EKG35477.1| carbamoyl-phosphate synthase, large subunit [Pseudomonas syringae pv.
            avellanae str. ISPaVe013]
 gi|407995554|gb|EKG36077.1| carbamoyl-phosphate synthase, large subunit [Pseudomonas syringae pv.
            avellanae str. ISPaVe037]
          Length = 1073

 Score = 1255 bits (3247), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 629/1088 (57%), Positives = 800/1088 (73%), Gaps = 28/1088 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILILGAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPAMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  + V +++EKERPDALLPTMGGQTALN A+ L   G LEK+GVE+IGA  D 
Sbjct: 63   ATYIEPIKWQTVAKIIEKERPDALLPTMGGQTALNCALDLEREGVLEKFGVEMIGANADT 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  F +AMK+IG+  P SGI ++++E  ++  ++G FP IIRP+FT+GGTGGGI
Sbjct: 123  IDKAEDRSRFDKAMKSIGLACPRSGIAHSMEEANAVLEKLG-FPCIIRPSFTMGGTGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEFE IC  GL  S T ++L+++SL+GWKEYE+EV+RD  DN +I+CSIEN DPMG
Sbjct: 182  AYNREEFEEICARGLDLSPTKELLIDESLIGWKEYEMEVVRDKKDNCIIVCSIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ LR+ S+A++REIGVE GGSNVQF + P  G ++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQILRNASLAVLREIGVETGGSNVQFGICPNTGRMVVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIA++AAKL+VGY+LD++ N+IT  KTPASFEPSIDYVVTK+PR
Sbjct: 302  PRVSRSSALASKATGFPIARVAAKLAVGYTLDELSNEITGGKTPASFEPSIDYVVTKLPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            FAFEKF  ++  LTTQMKSVGE MA+GRTFQES QKALR LE G  G       +LD   
Sbjct: 362  FAFEKFAKADARLTTQMKSVGEVMAIGRTFQESLQKALRGLEVGVCGLD----PKLDLSH 417

Query: 507  EQ----LKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLL 562
             +    LK  L VP  +R+  +  A + GM V+EI  ++ ID WFL Q ++LI  E+ + 
Sbjct: 418  PESMSTLKRELTVPGAERIWYVADAFRAGMTVEEIFAMNMIDPWFLVQIEDLIKDEEKIK 477

Query: 563  TQSVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFE 622
            T  +S + +D  + +KR+GFSD ++A     TEK +R  R  L V P YKRVDTCAAEF 
Sbjct: 478  TLGLSAIDRDVMFRLKRKGFSDARLAKLLGVTEKNLRTHRHKLEVFPVYKRVDTCAAEFA 537

Query: 623  ANTPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIM 682
             +T Y+YS+Y+ ECE+ P+ + K++ILGGGPNRIGQGIEFDYCC H + +L+  GYETIM
Sbjct: 538  TDTAYLYSTYEEECEANPSTRDKIMILGGGPNRIGQGIEFDYCCVHAALALREDGYETIM 597

Query: 683  MNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYL 742
            +N NPETVSTDYDTSDRLYFEP+T+EDVL ++ +E+P+G+IVQ+GGQTPLKL+       
Sbjct: 598  VNCNPETVSTDYDTSDRLYFEPVTLEDVLEIVRVEKPKGVIVQYGGQTPLKLA------- 650

Query: 743  DEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIA 802
               R   A+G   V I GTSPD+ID AEDRERF  +++ L++ QP     +SE +A+  A
Sbjct: 651  ---RALEAAG---VPIIGTSPDAIDRAEDRERFQHMVERLNLRQPPNATVRSEDEAIRAA 704

Query: 803  KEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVD 862
             +IGYP+VVRPSYVLGGRAMEIVY ++ L  YL  AV+V  + PVL+D +L+ AIE+DVD
Sbjct: 705  AKIGYPLVVRPSYVLGGRAMEIVYQEDELKRYLREAVQVSNDSPVLLDHFLNCAIEMDVD 764

Query: 863  ALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCG 922
            A+ D   +VVIG IM+HIEQAGVHSGDSAC +P  ++ +   D +     K+A  L V G
Sbjct: 765  AVCDGT-DVVIGAIMQHIEQAGVHSGDSACSLPPYSLPAHIQDEMREQVKKMALELGVVG 823

Query: 923  LMNCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEV 982
            LMN Q A+    D+Y++E NPRASRTVPFVSK IG  LA  AA VM+GK+L +L FTKE+
Sbjct: 824  LMNVQLALQGE-DIYVIEVNPRASRTVPFVSKCIGVSLAMIAARVMAGKTLKELNFTKEI 882

Query: 983  IPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSG 1042
            IP   SVKEAV PF KF G D +LGPEM+STGEVMG+  +F  AFAKAQ+ A + LP  G
Sbjct: 883  IPNFYSVKEAVFPFAKFPGVDPILGPEMKSTGEVMGVGDTFGEAFAKAQMGASEVLPTGG 942

Query: 1043 TVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGD 1102
            T F+S+ D  KP +E +A+  +++GF+IV+T+GTA  +E  G+ V RV K+ EGRPH  D
Sbjct: 943  TAFISVRDDDKPLVEAVARDLINLGFEIVATAGTAKLIEAAGLKVRRVNKVTEGRPHVVD 1002

Query: 1103 MVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTV 1162
            M+ N ++ +++ T+ G      D   +RR  L +K+   TT++   A  EA++     TV
Sbjct: 1003 MIKNDEVTLIINTTEGRQ-SIADSYSIRRNALQHKIYCTTTIAAGEAICEALKFGPEKTV 1061

Query: 1163 TMTALQDF 1170
                LQD 
Sbjct: 1062 RR--LQDL 1067


>gi|445423363|ref|ZP_21436601.1| carbamoyl-phosphate synthase, large subunit [Acinetobacter sp.
            WC-743]
 gi|444755743|gb|ELW80318.1| carbamoyl-phosphate synthase, large subunit [Acinetobacter sp.
            WC-743]
          Length = 1077

 Score = 1255 bits (3247), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 621/1076 (57%), Positives = 792/1076 (73%), Gaps = 24/1076 (2%)

Query: 86   LGKRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGL 145
            + KRTD++ ILI+GAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +
Sbjct: 1    MAKRTDIKSILIIGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPTM 60

Query: 146  ADRTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKL 205
            AD TYI P+T + V  ++EKERPDA+LPTMGGQTALN A+AL  +G L+KY VELIGA  
Sbjct: 61   ADATYIEPITWQTVAAIIEKERPDAVLPTMGGQTALNCALALDANGILKKYNVELIGATK 120

Query: 206  DAIKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGG 265
            +AI+KAEDR LF  AM+ IG++ P + +  +++  + I    G FP+IIRP+FT+GG+GG
Sbjct: 121  EAIEKAEDRKLFDIAMRKIGLECPRADVAESMEHALEIQARFG-FPVIIRPSFTMGGSGG 179

Query: 266  GIAYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDP 325
            GIAYNKEEF  IC+ G   S T Q+L+++SL+GWKEYE+EV+RD  DN +I+C+IEN DP
Sbjct: 180  GIAYNKEEFIEICERGFDLSPTKQLLIDESLIGWKEYEMEVVRDKNDNCIIVCTIENFDP 239

Query: 326  MGVHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIE 385
            MGVHTGDSITVAPAQTLTDKE+Q LR+ S+A++REIGVE GGSNVQF +NP DG ++VIE
Sbjct: 240  MGVHTGDSITVAPAQTLTDKEFQLLRNASLAVLREIGVETGGSNVQFGINPKDGRMVVIE 299

Query: 386  MNPRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKI 444
            MNPRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT   TPASFEP+IDYVVTKI
Sbjct: 300  MNPRVSRSSALASKATGFPIAKIAAKLAVGYTLDELKNDITGGTTPASFEPAIDYVVTKI 359

Query: 445  PRFAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDW 504
            PRF FEKFP ++  LTTQMKSVGE MA+GR FQES QKALR LE G  G+        + 
Sbjct: 360  PRFNFEKFPQADATLTTQMKSVGEVMAIGRNFQESVQKALRGLEVGTCGFDEQIAVGTEG 419

Query: 505  DWEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQ 564
              +++   L+VP PDR+  +  A + G  ++E+   + ID+WFL Q +++I  E+ + T 
Sbjct: 420  AKDKILVELKVPGPDRIWYVADAFRHGFTLEEVFAATNIDRWFLIQIEDIIKTEEQIKTL 479

Query: 565  SVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEAN 624
               ++  D+    KR+G SD +IA     ++K+ R+ R +LGV P YKRVDTCAAEFE++
Sbjct: 480  GFGDLNADNIRSFKRKGLSDLRIANLMGISQKQFRKHRWNLGVYPVYKRVDTCAAEFESD 539

Query: 625  TPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMN 684
            T YMYS+YD ECES P+ K K++++GGGPNRIGQGIEFDYCC H + +++  GYETIM+N
Sbjct: 540  TAYMYSTYDEECESNPSSKDKIMVIGGGPNRIGQGIEFDYCCVHAALAMREDGYETIMVN 599

Query: 685  SNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDE 744
             NPETVSTDYDTSDRLYFEP+T+EDVL ++  E+P+GIIVQ+GGQTPLKL+    + L+E
Sbjct: 600  CNPETVSTDYDTSDRLYFEPITLEDVLEIVRTEKPKGIIVQYGGQTPLKLA----RALEE 655

Query: 745  HRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKE 804
               P         I GTSPD+ID AEDRERF  +I+ L++ QP   I KS  + +A A +
Sbjct: 656  AGAP---------IIGTSPDAIDRAEDRERFQQMIQRLNLRQPSNSIVKSAEEGMAEASK 706

Query: 805  IGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDAL 864
            +GYP+VVRPSYVLGGRAMEIVY D+ L  YL +AV+   E PVL+D +L DA E+DVD +
Sbjct: 707  VGYPLVVRPSYVLGGRAMEIVYNDDELKRYLRDAVQASNEAPVLLDHFLDDATEVDVDCV 766

Query: 865  ADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLM 924
            +D   +VVIGGIM+HIEQAG+HSGDSAC IP  ++S    D +   T+ +AK L V GLM
Sbjct: 767  SDG-KDVVIGGIMQHIEQAGIHSGDSACSIPPYSLSQEIQDEMRRQTVAMAKELGVIGLM 825

Query: 925  NCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIP 984
            N Q+A+    DVY+LE NPRASRTVPFVSK IG  LAK AA  M+G+SL   GFTKE+IP
Sbjct: 826  NVQFAV-KGNDVYILEVNPRASRTVPFVSKCIGESLAKVAARCMAGQSLESQGFTKEIIP 884

Query: 985  KHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGT- 1043
             H +VKEAV PF KF G D +LGPEM+STGEVMG+  +F  AF KA + +  +LP   T 
Sbjct: 885  THFAVKEAVFPFNKFPGVDPILGPEMKSTGEVMGVGKTFGEAFYKAVLGSNDRLPGKPTE 944

Query: 1044 -----VFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRP 1098
                 VF+S+ D  KP    IAK  +D+GFKI++T GT   ++  GI  ERV K+ EGRP
Sbjct: 945  GEVKHVFISVRDSDKPRAPGIAKQLVDLGFKIIATGGTYDVIKDAGIECERVNKVTEGRP 1004

Query: 1099 HAGDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAI 1154
            +  D + NG+I +++ T+ G    Q D   +RR  L  KV   TT++GA A  +A+
Sbjct: 1005 NIVDRLKNGEIHLIINTTEGKQAQQ-DSFSIRRSALQGKVYYTTTLNGADAVCQAL 1059


>gi|163857856|ref|YP_001632154.1| carbamoyl phosphate synthase large subunit [Bordetella petrii DSM
            12804]
 gi|163261584|emb|CAP43886.1| carbamoyl-phosphate synthase large chain [Bordetella petrii]
          Length = 1080

 Score = 1255 bits (3247), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 631/1078 (58%), Positives = 807/1078 (74%), Gaps = 27/1078 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILI+GAGPI+IGQACEFDYSG QACKALK EGY  IL+NSNPATIMTDP  AD
Sbjct: 3    KRTDIKSILIIGAGPIIIGQACEFDYSGAQACKALKAEGYRTILVNSNPATIMTDPETAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+T + VE+++E+E+PDALLPTMGGQTALN A+ LA  G L K+ VELIGA   A
Sbjct: 63   VTYIEPITWQAVEKIIEREKPDALLPTMGGQTALNCALDLAHQGVLAKHNVELIGANEQA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGE------FPLIIRPAFTLG 261
            I+KAEDR  FKQAM  IG+++  SG+ +++DE   +   I        FP +IRP+FT+G
Sbjct: 123  IEKAEDRQKFKQAMTDIGLESAKSGVAHSMDEAWEVQRRIAAETGTSGFPAVIRPSFTMG 182

Query: 262  GTGGGIAYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIE 321
            G+GGGIAYN EEFE IC+ GL AS TS++L+E+SLLGWKE+E+EV+RD ADN +I+CSIE
Sbjct: 183  GSGGGIAYNAEEFETICRRGLEASPTSELLIEESLLGWKEFEMEVVRDKADNCIIVCSIE 242

Query: 322  NVDPMGVHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEV 381
            N+DPMGVHTGDSITVAPAQTLTDKEYQ +R+ SIA++REIGV+ GGSNVQFAVNP +G +
Sbjct: 243  NLDPMGVHTGDSITVAPAQTLTDKEYQIMRNASIAVLREIGVDTGGSNVQFAVNPDNGRM 302

Query: 382  MVIEMNPRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITK-KTPASFEPSIDYV 440
            +VIEMNPRVSRSSALASKATGFPIAK+AA+L+VGY+LD++ N+IT   TPASFEPSIDYV
Sbjct: 303  IVIEMNPRVSRSSALASKATGFPIAKVAARLAVGYTLDELRNEITGGATPASFEPSIDYV 362

Query: 441  VTKIPRFAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVK 500
            VTK+PRFAFEKFP ++  LTTQMKSVGE MA+GRTF+ESFQKALR LE G  G     + 
Sbjct: 363  VTKVPRFAFEKFPQADARLTTQMKSVGEVMAIGRTFKESFQKALRGLEVGVDG-----LN 417

Query: 501  ELDWDWEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQF 560
            +   D E+L+  L  P P+R+  +  A  +G  +DE+H ++ ID WFL+Q KE++D+E  
Sbjct: 418  QKTTDREKLQVELGEPGPERIWYVGDAFAQGFTLDEVHNITRIDPWFLSQIKEIVDIELA 477

Query: 561  LLTQSVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAE 620
            L  ++++++     +++KR GFSD+++AF   S+E E+R+ R  L V P YKRVDTCAAE
Sbjct: 478  LEQKTLADLDYPTLWQLKRMGFSDRRLAFLLDSSESEIRKLRHQLNVRPVYKRVDTCAAE 537

Query: 621  FEANTPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYET 680
            F   T YMYS+Y+ ECE+ PT +KK+++LGGGPNRIGQGIEFDYCC H + +L+  GYET
Sbjct: 538  FATRTAYMYSTYEDECEAQPTDRKKIIVLGGGPNRIGQGIEFDYCCVHAALALREDGYET 597

Query: 681  IMMNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQ 740
            IM+N NPETVSTDYDTSDRLYFEPLT+EDVL ++  E P G+IVQ+GGQTPLKL+     
Sbjct: 598  IMVNCNPETVSTDYDTSDRLYFEPLTLEDVLEIVHKENPVGMIVQYGGQTPLKLA----- 652

Query: 741  YLDEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALA 800
                 R   A+G   V I GTSP+SID AEDRERF  ++ +L + QP    A++E +ALA
Sbjct: 653  -----RALEANG---VPIIGTSPESIDVAEDRERFQKLLNKLGLRQPPNRTARTEGEALA 704

Query: 801  IAKEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEID 860
             A +IGYP+VVRPSYVLGGRAMEIV+  + L  Y+  AV+V  + PVL+D++L++A E+D
Sbjct: 705  HAADIGYPLVVRPSYVLGGRAMEIVHEQQDLERYMREAVKVSNDSPVLLDRFLNNATEVD 764

Query: 861  VDALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNV 920
            VD LAD    V IGG+MEHIEQAGVHSGDSAC +P  ++S+  +  I   T  +A+ LNV
Sbjct: 765  VDCLADG-ETVFIGGVMEHIEQAGVHSGDSACSLPPYSLSAEVIAEIKRQTTMMARALNV 823

Query: 921  CGLMNCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTK 980
             GLMN Q+AI   GDVY+LE NPRASRTVP+VSKA G  LAK AA  M+G++L + G T+
Sbjct: 824  NGLMNVQFAI-QGGDVYVLEVNPRASRTVPYVSKATGLQLAKIAARAMAGRTLAEQGVTR 882

Query: 981  EVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPL 1040
            EV+P + SVKEAV PF KF G D +LGPEM+STGEVMG+  SF  AF K+Q+AAG +LP 
Sbjct: 883  EVVPPYFSVKEAVFPFVKFPGVDTILGPEMKSTGEVMGVGTSFGEAFVKSQLAAGVRLPE 942

Query: 1041 SGTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHA 1100
            +GT F+S+ D  K     +A+   ++GFK+V+T GTA  +E  GI V+ V K+ EGRPH 
Sbjct: 943  NGTAFISVKDQDKTRAVEVARGLHNLGFKLVATRGTATQIEASGIPVQVVNKVTEGRPHI 1002

Query: 1101 GDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLK 1158
             DMV NG+I +++ T         D   +R + LA +V   TT++GA A  E ++ L+
Sbjct: 1003 VDMVKNGEISLVINTVEERRNAIADSRTIRTQALAARVTFFTTIAGARAAVEGMQYLR 1060



 Score =  242 bits (618), Expect = 8e-61,   Method: Compositional matrix adjust.
 Identities = 151/428 (35%), Positives = 240/428 (56%), Gaps = 24/428 (5%)

Query: 61  VRASSAKIDS-SAELSNGAA----SSKDQKLGKRTDLRKILILGAGPIVIGQACEFDYSG 115
           VR    ++D+ +AE +   A    + +D+   + TD +KI++LG GP  IGQ  EFDY  
Sbjct: 524 VRPVYKRVDTCAAEFATRTAYMYSTYEDECEAQPTDRKKIIVLGGGPNRIGQGIEFDYCC 583

Query: 116 TQACKALKEEGYEVILINSNPATIMTDPGLADRTYITPMTPELVEQVLEKERPDALLPTM 175
             A  AL+E+GYE I++N NP T+ TD   +DR Y  P+T E V +++ KE P  ++   
Sbjct: 584 VHAALALREDGYETIMVNCNPETVSTDYDTSDRLYFEPLTLEDVLEIVHKENPVGMIVQY 643

Query: 176 GGQTALNLAVALAESGALEKYGVELIGAKLDAIKKAEDRDLFKQAMKTIGVKTPPSGIGN 235
           GGQT L LA       ALE  GV +IG   ++I  AEDR+ F++ +  +G++ PP+    
Sbjct: 644 GGQTPLKLA------RALEANGVPIIGTSPESIDVAEDRERFQKLLNKLGLRQPPNRTAR 697

Query: 236 TLDECISIANEIGEFPLIIRPAFTLGGTGGGIAYNKEEFEAICKAGLAASLTSQVLVEKS 295
           T  E ++ A +IG +PL++RP++ LGG    I + +++ E   +  +  S  S VL+++ 
Sbjct: 698 TEGEALAHAADIG-YPLVVRPSYVLGGRAMEIVHEQQDLERYMREAVKVSNDSPVLLDRF 756

Query: 296 LLGWKEYELEVMRDLADNVVIICSIENVDPMGVHTGDSITVAPAQTLTDKEYQRLRDYSI 355
           L    E +++ + D  + V I   +E+++  GVH+GDS    P  +L+ +    ++  + 
Sbjct: 757 LNNATEVDVDCLAD-GETVFIGGVMEHIEQAGVHSGDSACSLPPYSLSAEVIAEIKRQTT 815

Query: 356 AIIREIGVECGGSNVQFAVNPVDGEVMVIEMNPRVSRSSALASKATGFPIAKMAAKLSVG 415
            + R + V  G  NVQFA+    G+V V+E+NPR SR+    SKATG  +AK+AA+   G
Sbjct: 816 MMARALNVN-GLMNVQFAIQ--GGDVYVLEVNPRASRTVPYVSKATGLQLAKIAARAMAG 872

Query: 416 YSLDQIPNDITKKTPASFEPSIDYVVTKIPRFAFEKFPGSEPLLTTQMKSVGEAMALGRT 475
            +L +    +T+      E    Y   K   F F KFPG + +L  +MKS GE M +G +
Sbjct: 873 RTLAE--QGVTR------EVVPPYFSVKEAVFPFVKFPGVDTILGPEMKSTGEVMGVGTS 924

Query: 476 FQESFQKA 483
           F E+F K+
Sbjct: 925 FGEAFVKS 932


>gi|88799655|ref|ZP_01115230.1| carbamoyl-phosphate synthase large subunit [Reinekea blandensis
            MED297]
 gi|88777549|gb|EAR08749.1| carbamoyl-phosphate synthase large subunit [Reinekea sp. MED297]
          Length = 1070

 Score = 1255 bits (3247), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 625/1070 (58%), Positives = 794/1070 (74%), Gaps = 20/1070 (1%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILILGAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIQSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPTMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  + VE+++ KE+PD LLPTMGGQTALN A+ L + G L+KYGVE+IGA  D 
Sbjct: 63   ATYIEPIVWQEVEKIIAKEKPDVLLPTMGGQTALNCALDLEKHGVLKKYGVEMIGANADT 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDRD F +AMK IG++TP SGI + +DE  +IA E+G FP IIRP+FT+GG+GGGI
Sbjct: 123  IDKAEDRDRFDKAMKAIGLETPKSGIAHNMDEAWAIAEELG-FPSIIRPSFTMGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYNK+EFE IC+ GL  S T+++L+++SL+GWKEYE+EV+RD ADN +I+CSIEN DPMG
Sbjct: 182  AYNKDEFEEICRRGLDLSPTNELLIDESLIGWKEYEMEVVRDKADNCIIVCSIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            +HTGDSITVAP+QTLTDKEYQ +R+ S+A++REIGVE GGSNVQF +NP  G +++IEMN
Sbjct: 242  IHTGDSITVAPSQTLTDKEYQIMRNASLAVLREIGVETGGSNVQFGINPDTGRMVIIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKK-TPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL++GY+LD++ NDIT   TPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAIGYTLDELQNDITGGVTPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            FAFEKFP +   LTTQMKSVGE MA+GR FQES QKALR LE G SG+      E     
Sbjct: 362  FAFEKFPQANDRLTTQMKSVGEVMAIGRNFQESLQKALRGLEVGASGFDPVVDAEAANAH 421

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
            + +   LR   P+R+  I  A + GM VDE+  L+ ID+WFL Q ++LI  E  L   S+
Sbjct: 422  DLIFRELREAGPERIWYIGDAFRSGMSVDEVFSLTNIDRWFLVQIEDLIREETALAQTSM 481

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
             ++ +     +KR+GFSD+++A     +E E R+KR +L V P YKRVDTCAAEF ++T 
Sbjct: 482  KDIDEAFMRRLKRKGFSDQRMAKLLGISEIEFRKKRWALNVRPVYKRVDTCAAEFASDTA 541

Query: 627  YMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSN 686
            YMYSSYD ECE+APT ++K++++GGGPNRIGQGIEFDYCC H S S +  G+ETIM+N N
Sbjct: 542  YMYSSYDEECEAAPTDREKIMVIGGGPNRIGQGIEFDYCCVHASLSARENGFETIMINCN 601

Query: 687  PETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHR 746
            PETVSTDYDTSDRLYFEP+T EDVL +I+LE+P+G+IV +GGQTPLKL+          R
Sbjct: 602  PETVSTDYDTSDRLYFEPVTAEDVLEIIELEKPKGVIVHYGGQTPLKLA----------R 651

Query: 747  LPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEIG 806
               A+G  ++   GTSPD+ID AEDRERF  ++ +L + QP+ G A+S  +A+ IA  IG
Sbjct: 652  ELEAAGAPII---GTSPDAIDRAEDRERFQVMVDKLGLLQPENGTARSHDEAVKIAARIG 708

Query: 807  YPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALAD 866
            YP+VVRPSYVLGGRAMEIVY +E L  Y+  AV+V  E PVL+D++L DAIE+D+D ++D
Sbjct: 709  YPLVVRPSYVLGGRAMEIVYREEELNRYMNEAVQVSNEAPVLLDRFLDDAIEVDIDCVSD 768

Query: 867  SCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNC 926
                VVIG IM+HIEQAGVHSGDSAC +P  ++       I      +A  LNV GLMN 
Sbjct: 769  G-EQVVIGAIMQHIEQAGVHSGDSACSLPPYSLPDEAQQQIRDQVKAMALELNVVGLMNV 827

Query: 927  QYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPKH 986
            Q A    G +Y++E NPRASRTVPFVSKAIG  LAK    VM+G+ L+D+GFT+EV+P  
Sbjct: 828  QMA-WQDGKLYIIEVNPRASRTVPFVSKAIGQSLAKIGTQVMTGQKLSDIGFTEEVVPHF 886

Query: 987  VSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVFL 1046
             SVKEAV+PF KF G D +L PEM+STGEVMG   +FP AFAKA I AG  +P SG V +
Sbjct: 887  YSVKEAVMPFNKFPGVDPVLSPEMKSTGEVMGTGKTFPEAFAKAVIGAGSTMPRSGKVII 946

Query: 1047 SLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVAN 1106
            S+ D  K     +A     +GF +V+T GTA +    G+  + V K+ EGRPH  DM+ N
Sbjct: 947  SVKDSDKVAALAMATDLARMGFDVVATKGTAKYFTENGLPTQAVNKVKEGRPHLVDMIKN 1006

Query: 1107 GQIQMMVITSSG-DSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIR 1155
             ++  ++ T++G  SL  +D  ++R+  L +KV   TT++GA A+  A++
Sbjct: 1007 DEVAFVMNTTAGRQSL--VDSAEIRKGALQHKVYYTTTLAGAEASVMAMQ 1054


>gi|419797213|ref|ZP_14322709.1| carbamoyl-phosphate synthase, large subunit [Neisseria sicca VK64]
 gi|385698586|gb|EIG28940.1| carbamoyl-phosphate synthase, large subunit [Neisseria sicca VK64]
          Length = 1071

 Score = 1255 bits (3247), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 623/1070 (58%), Positives = 795/1070 (74%), Gaps = 22/1070 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTDL+ ILI+GAGPIVIGQACEFDYSG QACKAL+EEGY+VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDLKSILIIGAGPIVIGQACEFDYSGAQACKALREEGYKVILVNSNPATIMTDPEMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  + VE+++ KERPDA+LPTMGGQTALN A+ LA +G L KY VELIGA  DA
Sbjct: 63   VTYIEPIMWQTVEKIIAKERPDAILPTMGGQTALNCALDLARNGVLAKYNVELIGATEDA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  FK+AM+ IG+  P S + +T++E ++   ++G FP +IRP+FT+GG+GGGI
Sbjct: 123  IDKAEDRGRFKEAMEKIGLSCPKSFVCHTMNEALAAQEQVG-FPTLIRPSFTMGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYNK+EF AIC+ G  AS T ++L+E+S+LGWKEYE+EV+RD ADN +IICSIEN DPMG
Sbjct: 182  AYNKDEFLAICERGFDASPTHELLIEQSVLGWKEYEMEVVRDKADNCIIICSIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGV+ GGSNVQFAVNP +GE++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQIMRNASLAVLREIGVDTGGSNVQFAVNPENGEMIVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VG++LD++ NDIT  +TPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGFTLDELRNDITGGRTPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            FAFEKFP ++  LTTQMKSVGE MA+GRT QESFQKALR LE G  G+   +      D 
Sbjct: 362  FAFEKFPAADDRLTTQMKSVGEVMAMGRTIQESFQKALRGLETGLCGFNPRS-----SDK 416

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
             +++  L  P P+RM  +  A + G  ++EIHE+  ID WFL Q ++L+  EQ +    +
Sbjct: 417  AEIRRELANPGPERMLFVADAFRAGFTLEEIHEICAIDPWFLAQIEDLVKEEQQVSAGCL 476

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
             ++       +KR+GFSDK+IA      EKEVRE R +L + P YKRVDTCAAEF   T 
Sbjct: 477  QDLDFAALRRLKRKGFSDKRIAQLLGVKEKEVREHRYALKLHPVYKRVDTCAAEFATETA 536

Query: 627  YMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSN 686
            Y+YS+Y+ ECE+ P+ +KKV+ILGGGPNRIGQGIEFDYCC H + +L+ +G+ETIM+N N
Sbjct: 537  YLYSTYEEECEARPSDRKKVMILGGGPNRIGQGIEFDYCCVHAALALRESGFETIMVNCN 596

Query: 687  PETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHR 746
            PETVSTD+DTSDRLYFEPLT+EDVL ++  E P G+IV +GGQTPLKL+           
Sbjct: 597  PETVSTDFDTSDRLYFEPLTLEDVLEIVRTENPWGVIVHYGGQTPLKLA----------- 645

Query: 747  LPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEIG 806
              +A  +  V I GTS DSIDAAEDRERF  ++ +L + QP   IA +E +AL  A+EIG
Sbjct: 646  --NALVENGVNIIGTSADSIDAAEDRERFQKVLNDLGLRQPPNRIAHNEEEALVKAEEIG 703

Query: 807  YPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALAD 866
            YP+VVRPSYVLGGRAM++V++ E L  Y+  AV+V  + PVL+D +L++AIE+DVD ++D
Sbjct: 704  YPLVVRPSYVLGGRAMQVVHSAEELQKYMREAVQVSEDSPVLLDFFLNNAIEVDVDCVSD 763

Query: 867  SCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNC 926
               +VVIGGIM+H+EQAG+HSGDS C +P  ++S    D I   T  +A  L V GLMN 
Sbjct: 764  G-KDVVIGGIMQHVEQAGIHSGDSGCSLPPYSLSEEIQDEIRRQTKAMAYALGVVGLMNV 822

Query: 927  QYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPKH 986
            Q+A+   G V++LE NPRASRTVPFVSKA G PLAK  A  M+G SL + G  KEV+P  
Sbjct: 823  QFAV-QDGVVFVLEVNPRASRTVPFVSKATGVPLAKVGARCMAGISLQEQGVEKEVVPDF 881

Query: 987  VSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVFL 1046
              VKEAV PF KF G D +LGPEMRSTGEVMG+  SF  A+ KAQ+ AG++L  +G +FL
Sbjct: 882  YVVKEAVFPFIKFPGVDTILGPEMRSTGEVMGVGASFGEAYYKAQLGAGERLNPTGKIFL 941

Query: 1047 SLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVAN 1106
            ++ D  KP + + A+ F  +G+ + +T GTA +L+  GI V+ V K+ EGRPH  D + N
Sbjct: 942  AVRDEDKPLIVKTAQNFQALGYGVCATRGTAEYLKEHGIIVQAVNKVQEGRPHIVDAIKN 1001

Query: 1107 GQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRS 1156
            G+I ++V T S  +    D   +RR  L  +VP  TT++G  A +E  +S
Sbjct: 1002 GEIALVVNTVSSSAQSIADSHSIRRTSLTQRVPQYTTIAGGEAMSEGAKS 1051


>gi|429463225|ref|YP_007184688.1| carbamoyl-phosphate synthase large chain [Candidatus
            Kinetoplastibacterium crithidii (ex Angomonas deanei ATCC
            30255)]
 gi|451811280|ref|YP_007447735.1| carbamoyl-phosphate synthase large subunit [Candidatus
            Kinetoplastibacterium crithidii TCC036E]
 gi|429338739|gb|AFZ83162.1| carbamoyl-phosphate synthase large chain [Candidatus
            Kinetoplastibacterium crithidii (ex Angomonas deanei ATCC
            30255)]
 gi|451776438|gb|AGF47437.1| carbamoyl-phosphate synthase large subunit [Candidatus
            Kinetoplastibacterium crithidii TCC036E]
          Length = 1079

 Score = 1254 bits (3246), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 630/1091 (57%), Positives = 802/1091 (73%), Gaps = 28/1091 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KR DL+ ILI+GAGPIVIGQACEFDYSG QACKALK EG+  IL+NSNPATIMTDP  AD
Sbjct: 3    KRKDLKSILIIGAGPIVIGQACEFDYSGAQACKALKAEGFRTILVNSNPATIMTDPETAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  + +E+++EKERPDALLPTMGGQTALN A+ LA  G L+KY VELIGA   A
Sbjct: 63   VTYIEPINFQALEKIIEKERPDALLPTMGGQTALNCALDLAHHGILDKYNVELIGANAAA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGE-----FPLIIRPAFTLGG 262
            I+KAEDR  FKQAM  IG+++  SG+ ++++E   +   I       FP++IRP+FT+GG
Sbjct: 123  IEKAEDRQKFKQAMTNIGLESAKSGMAHSMEEAWDVQRNIASSGISAFPVVIRPSFTMGG 182

Query: 263  TGGGIAYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIEN 322
            +GGGIAYN EEFE IC  GL AS T+++L+E+SLLGWKE+E+EV+RD  DN +IICSIEN
Sbjct: 183  SGGGIAYNAEEFEDICLRGLEASPTNELLIEESLLGWKEFEMEVIRDKVDNCIIICSIEN 242

Query: 323  VDPMGVHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVM 382
            +DPMGVHTGDSITVAPAQTLTDKEYQ +R  SIA++REIGV+ GGSNVQFAVNP +G ++
Sbjct: 243  LDPMGVHTGDSITVAPAQTLTDKEYQIMRSASIAVLREIGVDTGGSNVQFAVNPKNGRMV 302

Query: 383  VIEMNPRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKK-TPASFEPSIDYVV 441
            VIEMNPRVSRSSALASKATGFPIAK+AA L+VGY+LD++ NDIT   TPASFEPSIDYVV
Sbjct: 303  VIEMNPRVSRSSALASKATGFPIAKVAALLAVGYTLDELKNDITGGLTPASFEPSIDYVV 362

Query: 442  TKIPRFAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKE 501
            TK+PRFAFEKFP +   LTTQMKSVGE MA+GRTFQESFQKALR LE G  G     V  
Sbjct: 363  TKVPRFAFEKFPTANSRLTTQMKSVGEVMAIGRTFQESFQKALRGLEVGVDGLNQKTV-- 420

Query: 502  LDWDWEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFL 561
               D E L+  L  P P+R+  +  A  +   VDE+H ++ ID WFL Q KE++D+E  L
Sbjct: 421  ---DCETLQVELGEPGPERIWYVADAFAQKWTVDEVHNITKIDPWFLDQIKEIVDIELSL 477

Query: 562  LTQSVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEF 621
               +++++     +E+KRRGFSD +I +   S+E E+R+ R  LG+IP YKRVDTCA+EF
Sbjct: 478  ENYNLADLDYKTLFELKRRGFSDSRIGYLLDSSEYEIRKLRYELGIIPVYKRVDTCASEF 537

Query: 622  EANTPYMYSSYDFECESAPT-QKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYET 680
              NT YMYS+Y+ ECES P+  K+KV+ILGGGPNRIGQGIEFDYCC H S +L+  GYET
Sbjct: 538  STNTAYMYSTYEDECESKPSADKQKVIILGGGPNRIGQGIEFDYCCVHASLALREDGYET 597

Query: 681  IMMNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQ 740
            IM+N NPETVSTDYD SDRLYFEPLT+E+VL +++ E P G+IV +GGQTPLKL+    +
Sbjct: 598  IMINCNPETVSTDYDISDRLYFEPLTLENVLEIVNKENPIGVIVHYGGQTPLKLA----K 653

Query: 741  YLDEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALA 800
             L+ + +P         I GTSP+SID AEDRERF  ++ ++++ QP    A++E++AL 
Sbjct: 654  ALEANGVP---------IIGTSPESIDIAEDRERFQKLLNKINLRQPPNRTARTESEALT 704

Query: 801  IAKEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEID 860
            +A EIGYP+VVRPSYVLGGRAMEIV+    L  Y+ +AV+V  + PVL+D++L+ A E+D
Sbjct: 705  LAVEIGYPLVVRPSYVLGGRAMEIVHEQNDLERYMRDAVKVSNDSPVLLDRFLNHATEVD 764

Query: 861  VDALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNV 920
            VD LAD   N  I G+MEHIEQAGVHSGDSAC +P  ++S   +  I S T  +AK LNV
Sbjct: 765  VDCLADGS-NFFIAGVMEHIEQAGVHSGDSACSLPPYSLSEEIISEIKSQTGLIAKSLNV 823

Query: 921  CGLMNCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTK 980
             GLMN Q+A+   GDVY+LE NPRASRTVP+VSK+ G  LAK AA +  GKSL +     
Sbjct: 824  KGLMNIQFAV-QDGDVYVLEVNPRASRTVPYVSKSTGLQLAKVAARIKVGKSLLEQNVLN 882

Query: 981  EVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPL 1040
            E+ P + SVKEAV PF KF G D +LGPEM+STGEVMG+  +F  A+ KAQ+ AG KLP 
Sbjct: 883  EISPDYFSVKEAVFPFVKFPGVDTILGPEMKSTGEVMGVGKTFGEAYVKAQLGAGVKLPN 942

Query: 1041 SGTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHA 1100
            SGT F+S+ D  K  +  IAK   ++GF++V++ GTA  +   G+ V+ V K++EGRPH 
Sbjct: 943  SGTAFISVRDQDKNIVVEIAKGLYELGFQLVASKGTAQKIIDAGLPVKIVNKVNEGRPHI 1002

Query: 1101 GDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLK-S 1159
             DM+ NG+I +++ T        +D   +R + LA +V   TTVSGA A  + +  L+ S
Sbjct: 1003 VDMIRNGEISLVINTVEERRNAIVDSRMIRVQSLANRVTCFTTVSGARAAVQGMHYLRGS 1062

Query: 1160 NTVTMTALQDF 1170
            + + + +LQ+ 
Sbjct: 1063 SGMQVYSLQEL 1073


>gi|344942523|ref|ZP_08781810.1| carbamoyl-phosphate synthase, large subunit [Methylobacter
            tundripaludum SV96]
 gi|344259810|gb|EGW20082.1| carbamoyl-phosphate synthase, large subunit [Methylobacter
            tundripaludum SV96]
          Length = 1072

 Score = 1254 bits (3246), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 622/1086 (57%), Positives = 808/1086 (74%), Gaps = 24/1086 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ IL+LGAGPIVIGQACEFDYSGTQACKAL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIKSILLLGAGPIVIGQACEFDYSGTQACKALREEGYRVILVNSNPATIMTDPDMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  + VE+++ KERPDA+LPTMGGQTALN A+ L  +G LEKYGVE+IGA  +A
Sbjct: 63   ATYIEPIDWQTVEKIIAKERPDAILPTMGGQTALNCALDLDANGVLEKYGVEMIGATKEA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR+LF QAM+ IG +   S   ++++E ++   E+G +P +IRP+FT+GG+GGGI
Sbjct: 123  INKAEDRELFNQAMRKIGYEVAKSKTAHSMEEALAAQQEVG-YPTVIRPSFTMGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYNKEEF  IC+ GL  S T+++L+E+S+LGWKEYE+EV+RD  DN +I+CSIEN DPMG
Sbjct: 182  AYNKEEFVEICERGLYLSPTNELLIEESVLGWKEYEMEVVRDSKDNCIIVCSIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ LR+ S+A++REIGV+ GGSNVQ A+NP DG ++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQILRNVSLAVLREIGVDTGGSNVQVAINPKDGRMIVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ N+IT   TPASFEP+IDYVVTK+PR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGYTLDELKNEITGGATPASFEPTIDYVVTKVPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWD- 505
            F FEKFP ++  LTTQMKSVGE MA+GRTFQES QKALR LE G SG     + +L+ + 
Sbjct: 362  FTFEKFPQADDRLTTQMKSVGEVMAIGRTFQESLQKALRGLEIGISGL--DEIIDLNRED 419

Query: 506  -WEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQ 564
              E+++  +R P PDR+  +  A + GM ++++HE S ID WFL Q ++L+  E+ L T+
Sbjct: 420  AREKMQREMRHPGPDRLLYVADAFRSGMSLEDVHEASKIDPWFLAQVEDLVITEKSLSTK 479

Query: 565  SVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEAN 624
            ++S + + + Y++KR+GFSD ++A    ++E EVR  R    + P YKR+D+CAAEF ++
Sbjct: 480  TLSTLKEGELYKLKRKGFSDIRLAKLLDTSESEVRNVRHKQNIRPVYKRIDSCAAEFSSD 539

Query: 625  TPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMN 684
            T Y+YS+Y+ ECE+  + ++K++ILGGGPNRIGQGIEFDYCC H + +L+  GYETIM+N
Sbjct: 540  TAYLYSTYEQECEARVSDREKIIILGGGPNRIGQGIEFDYCCVHAALALREDGYETIMIN 599

Query: 685  SNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDE 744
             NPETVSTD+DTSDRLYFE LT+EDVL ++ +E+P+G+IVQ+GGQTPLKL+         
Sbjct: 600  CNPETVSTDFDTSDRLYFESLTLEDVLEIVHIEQPKGVIVQYGGQTPLKLA--------- 650

Query: 745  HRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKE 804
             R   A+G   V I GTSPDSID AEDRERF  +++ L+++QP    A+S   A+  AKE
Sbjct: 651  -RALEAAG---VPIIGTSPDSIDLAEDRERFQKLLERLNLKQPPNATARSVEQAINAAKE 706

Query: 805  IGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDAL 864
            +GYP+VVRPSYVLGGRAMEIV+ +E L  Y++ AV V  + PVL+D++L DA+E+DVDA+
Sbjct: 707  LGYPLVVRPSYVLGGRAMEIVFNEEGLQRYMKEAVSVSNDSPVLLDRFLDDAVEMDVDAI 766

Query: 865  ADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLM 924
             D    V+IGG+MEHIEQAGVHSGDSAC +P   ++    D +     K+A+ L V GLM
Sbjct: 767  YDG-EQVLIGGLMEHIEQAGVHSGDSACSLPPYELAPELQDKLREQVTKMAEALGVVGLM 825

Query: 925  NCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIP 984
            N Q+AI    D+Y+LE NPRASRT PFVSKA G+ LAK AA  M G++L   G TKE IP
Sbjct: 826  NTQFAIQGE-DIYVLEVNPRASRTAPFVSKATGYALAKIAARCMVGQTLAQQGITKERIP 884

Query: 985  KHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTV 1044
             + SVKEAV PF KF G D LLGPEM+STGEVMG+  +F  AFAK+Q AAG  L  SG V
Sbjct: 885  DYYSVKEAVFPFVKFPGVDPLLGPEMKSTGEVMGVGKTFGEAFAKSQRAAGVNLNHSGKV 944

Query: 1045 FLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMV 1104
             +S+ D  K     +A+  +D  ++IV+T GTA FL+  GI  E V K++EGRP+  DM+
Sbjct: 945  LISIRDADKAKAPDVARMLVDKKYEIVATGGTAKFLKDAGIPCEVVYKVNEGRPNTVDMI 1004

Query: 1105 ANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTVTM 1164
             N QIQ+++ T+ G      D   +RR  L ++V   TT++GA A   A+  L +  V  
Sbjct: 1005 KNDQIQLIINTTEGKKAIS-DSFTMRREALQHRVTYYTTMAGARAACYALGELDAGDV-- 1061

Query: 1165 TALQDF 1170
              LQD 
Sbjct: 1062 NCLQDL 1067



 Score =  263 bits (673), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 165/434 (38%), Positives = 250/434 (57%), Gaps = 24/434 (5%)

Query: 58  RSRVRASSAKIDS-SAELSNGAA---SSKDQKLGKR-TDLRKILILGAGPIVIGQACEFD 112
           +  +R    +IDS +AE S+  A   S+ +Q+   R +D  KI+ILG GP  IGQ  EFD
Sbjct: 519 KQNIRPVYKRIDSCAAEFSSDTAYLYSTYEQECEARVSDREKIIILGGGPNRIGQGIEFD 578

Query: 113 YSGTQACKALKEEGYEVILINSNPATIMTDPGLADRTYITPMTPELVEQVLEKERPDALL 172
           Y    A  AL+E+GYE I+IN NP T+ TD   +DR Y   +T E V +++  E+P  ++
Sbjct: 579 YCCVHAALALREDGYETIMINCNPETVSTDFDTSDRLYFESLTLEDVLEIVHIEQPKGVI 638

Query: 173 PTMGGQTALNLAVALAESGALEKYGVELIGAKLDAIKKAEDRDLFKQAMKTIGVKTPPSG 232
              GGQT L LA       ALE  GV +IG   D+I  AEDR+ F++ ++ + +K PP+ 
Sbjct: 639 VQYGGQTPLKLA------RALEAAGVPIIGTSPDSIDLAEDRERFQKLLERLNLKQPPNA 692

Query: 233 IGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGIAYNKEEFEAICKAGLAASLTSQVLV 292
              ++++ I+ A E+G +PL++RP++ LGG    I +N+E  +   K  ++ S  S VL+
Sbjct: 693 TARSVEQAINAAKELG-YPLVVRPSYVLGGRAMEIVFNEEGLQRYMKEAVSVSNDSPVLL 751

Query: 293 EKSLLGWKEYELEVMRDLADNVVIICSIENVDPMGVHTGDSITVAPAQTLTDKEYQRLRD 352
           ++ L    E +++ + D  + V+I   +E+++  GVH+GDS    P   L  +   +LR+
Sbjct: 752 DRFLDDAVEMDVDAIYD-GEQVLIGGLMEHIEQAGVHSGDSACSLPPYELAPELQDKLRE 810

Query: 353 YSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMNPRVSRSSALASKATGFPIAKMAAKL 412
               +   +GV  G  N QFA+   D  + V+E+NPR SR++   SKATG+ +AK+AA+ 
Sbjct: 811 QVTKMAEALGV-VGLMNTQFAIQGED--IYVLEVNPRASRTAPFVSKATGYALAKIAARC 867

Query: 413 SVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRFAFEKFPGSEPLLTTQMKSVGEAMAL 472
            VG +L Q    ITK      E   DY   K   F F KFPG +PLL  +MKS GE M +
Sbjct: 868 MVGQTLAQ--QGITK------ERIPDYYSVKEAVFPFVKFPGVDPLLGPEMKSTGEVMGV 919

Query: 473 GRTFQESFQKALRS 486
           G+TF E+F K+ R+
Sbjct: 920 GKTFGEAFAKSQRA 933


>gi|257482272|ref|ZP_05636313.1| carbamoyl phosphate synthase large subunit [Pseudomonas syringae pv.
            tabaci str. ATCC 11528]
 gi|422682146|ref|ZP_16740413.1| carbamoyl phosphate synthase large subunit [Pseudomonas syringae pv.
            tabaci ATCC 11528]
 gi|331011487|gb|EGH91543.1| carbamoyl phosphate synthase large subunit [Pseudomonas syringae pv.
            tabaci str. ATCC 11528]
          Length = 1073

 Score = 1254 bits (3246), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 628/1088 (57%), Positives = 800/1088 (73%), Gaps = 28/1088 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILILGAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPAMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  + V +++EKERPDALLPTMGGQTALN A+ L   G LEK+GVE+IGA  D 
Sbjct: 63   ATYIEPIKWQTVAKIIEKERPDALLPTMGGQTALNCALDLEREGVLEKFGVEMIGANADT 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  F +AMK+IG+  P SGI ++++E  ++  ++G FP IIRP+FT+GGTGGGI
Sbjct: 123  IDKAEDRSRFDKAMKSIGLACPRSGIAHSMEEANAVLEKLG-FPCIIRPSFTMGGTGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEFE IC  GL  S T ++L+++SL+GWKEYE+EV+RD  DN +I+CSIEN DPMG
Sbjct: 182  AYNREEFEEICARGLDLSPTKELLIDESLIGWKEYEMEVVRDKKDNCIIVCSIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ LR+ S+A++REIGVE GGSNVQF + P  G ++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQILRNASLAVLREIGVETGGSNVQFGICPDTGRMVVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIA++AAKL+VGY+LD++ N+IT  KTPASFEPSIDYVVTK+PR
Sbjct: 302  PRVSRSSALASKATGFPIARVAAKLAVGYTLDELSNEITGGKTPASFEPSIDYVVTKLPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            FAFEKF  ++  LTTQMKSVGE MA+GRTFQES QKALR LE G  G       +LD   
Sbjct: 362  FAFEKFAKADARLTTQMKSVGEVMAIGRTFQESLQKALRGLEVGVCGLD----PKLDLSH 417

Query: 507  EQ----LKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLL 562
             +    LK  L VP  +R+  +  A + GM V+EI  ++ ID WFL Q ++L+  E+ + 
Sbjct: 418  PESMSTLKRELTVPGAERIWYVADAFRAGMTVEEIFAMNMIDPWFLVQIEDLVKDEEKIK 477

Query: 563  TQSVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFE 622
            T  +S + +D  + +KR+GFSD ++A     TEK +R  R  L V P YKRVDTCAAEF 
Sbjct: 478  TLGLSAIDRDLMFRLKRKGFSDARLAKLLGVTEKNLRTHRHKLEVFPVYKRVDTCAAEFA 537

Query: 623  ANTPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIM 682
             +T Y+YS+Y+ ECE+ P+ + K++ILGGGPNRIGQGIEFDYCC H + +L+  GYETIM
Sbjct: 538  TDTAYLYSTYEEECEANPSTRDKIMILGGGPNRIGQGIEFDYCCVHAALALREDGYETIM 597

Query: 683  MNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYL 742
            +N NPETVSTDYDTSDRLYFEP+T+EDVL ++ +E+P+G+IVQ+GGQTPLKL+       
Sbjct: 598  VNCNPETVSTDYDTSDRLYFEPVTLEDVLEIVRVEKPKGVIVQYGGQTPLKLA------- 650

Query: 743  DEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIA 802
               R   A+G   V I GTSPD+ID AEDRERF  +++ L++ QP     +SE +A+  A
Sbjct: 651  ---RALEAAG---VPIIGTSPDAIDRAEDRERFQQMVERLNLRQPPNATVRSEDEAIRAA 704

Query: 803  KEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVD 862
             +IGYP+VVRPSYVLGGRAMEIVY ++ L  YL  AV+V  + PVL+D +L+ AIE+DVD
Sbjct: 705  AKIGYPLVVRPSYVLGGRAMEIVYQEDELKRYLREAVQVSNDSPVLLDHFLNCAIEMDVD 764

Query: 863  ALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCG 922
            A+ D   +VVIG IM+HIEQAGVHSGDSAC +P  ++ +   D +     K+A  L V G
Sbjct: 765  AVCDGT-DVVIGAIMQHIEQAGVHSGDSACSLPPYSLPAHIQDEMREQVKKMALELGVVG 823

Query: 923  LMNCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEV 982
            LMN Q A+    D+Y++E NPRASRTVPFVSK IG  LA  AA VM+GK+L +L FTKE+
Sbjct: 824  LMNVQLALQGE-DIYVIEVNPRASRTVPFVSKCIGVSLAMIAARVMAGKTLKELNFTKEI 882

Query: 983  IPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSG 1042
            IP   SVKEAV PF KF G D +LGPEM+STGEVMG+  +F  AFAKAQ+ A + LP  G
Sbjct: 883  IPNFYSVKEAVFPFAKFPGVDPILGPEMKSTGEVMGVGDTFGEAFAKAQMGASEVLPTGG 942

Query: 1043 TVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGD 1102
            T F+S+ D  KP +E +A+  +++GF+IV+T+GTA  +E  G+ V RV K+ EGRPH  D
Sbjct: 943  TAFISVRDDDKPLVEAVARDLINLGFEIVATAGTAKLIEAAGLKVRRVNKVTEGRPHVVD 1002

Query: 1103 MVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTV 1162
            M+ N ++ +++ T+ G      D   +RR  L +K+   TT++   A  EA++     TV
Sbjct: 1003 MIKNDEVTLIINTTEGRQ-SIADSYSIRRNALQHKIYCTTTIAAGEAICEALKFGPEKTV 1061

Query: 1163 TMTALQDF 1170
                LQD 
Sbjct: 1062 RR--LQDL 1067


>gi|440722202|ref|ZP_20902585.1| carbamoyl phosphate synthase large subunit [Pseudomonas syringae
            BRIP34876]
 gi|440725914|ref|ZP_20906174.1| carbamoyl phosphate synthase large subunit [Pseudomonas syringae
            BRIP34881]
 gi|443642352|ref|ZP_21126202.1| Carbamoyl-phosphate synthase, large subunit [Pseudomonas syringae pv.
            syringae B64]
 gi|440361731|gb|ELP98948.1| carbamoyl phosphate synthase large subunit [Pseudomonas syringae
            BRIP34876]
 gi|440367801|gb|ELQ04856.1| carbamoyl phosphate synthase large subunit [Pseudomonas syringae
            BRIP34881]
 gi|443282369|gb|ELS41374.1| Carbamoyl-phosphate synthase, large subunit [Pseudomonas syringae pv.
            syringae B64]
          Length = 1073

 Score = 1254 bits (3246), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 629/1088 (57%), Positives = 800/1088 (73%), Gaps = 28/1088 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILILGAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPVMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  + V +++EKERPDALLPTMGGQTALN A+ L   G LEK+GVE+IGA  D 
Sbjct: 63   ATYIEPIKWQTVAKIIEKERPDALLPTMGGQTALNCALDLEREGVLEKFGVEMIGANADT 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  F +AMK+IG+  P SGI ++++E  ++  ++G FP IIRP+FT+GGTGGGI
Sbjct: 123  IDKAEDRSRFDKAMKSIGLACPRSGIAHSMEEANAVLEKLG-FPCIIRPSFTMGGTGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEFE IC  GL  S T ++L+++SL+GWKEYE+EV+RD  DN +I+CSIEN DPMG
Sbjct: 182  AYNREEFEEICARGLDLSPTKELLIDESLIGWKEYEMEVVRDKKDNCIIVCSIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ LR+ S+A++REIGVE GGSNVQF + P  G ++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQILRNASLAVLREIGVETGGSNVQFGICPNTGRMVVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIA++AAKL+VGY+LD++ N+IT  KTPASFEPSIDYVVTK+PR
Sbjct: 302  PRVSRSSALASKATGFPIARVAAKLAVGYTLDELSNEITGGKTPASFEPSIDYVVTKLPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            FAFEKF  ++  LTTQMKSVGE MA+GRTFQES QKALR LE G  G       +LD   
Sbjct: 362  FAFEKFAKADARLTTQMKSVGEVMAIGRTFQESLQKALRGLEVGVCGLD----PKLDLSH 417

Query: 507  EQ----LKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLL 562
             +    LK  L VP  +R+  +  A + GM V+EI  ++ ID WFL Q ++LI  E+ + 
Sbjct: 418  PESMSTLKRELTVPGAERIWYVADAFRAGMTVEEIFAMNMIDPWFLVQIEDLIKDEEKIK 477

Query: 563  TQSVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFE 622
            T  +S + +D  + +KR+GFSD ++A     TEK +R  R  L V P YKRVDTCAAEF 
Sbjct: 478  TLGLSAIDRDVMFRLKRKGFSDARLAKLLGVTEKNLRTHRHKLEVFPVYKRVDTCAAEFA 537

Query: 623  ANTPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIM 682
             +T Y+YS+Y+ ECE+ P+ + K++ILGGGPNRIGQGIEFDYCC H + +L+  GYETIM
Sbjct: 538  TDTAYLYSTYEEECEANPSTRDKIMILGGGPNRIGQGIEFDYCCVHAALALREDGYETIM 597

Query: 683  MNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYL 742
            +N NPETVSTDYDTSDRLYFEP+T+EDVL ++ +E+P+G+IVQ+GGQTPLKL+       
Sbjct: 598  VNCNPETVSTDYDTSDRLYFEPVTLEDVLEIVRVEKPKGVIVQYGGQTPLKLA------- 650

Query: 743  DEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIA 802
               R   A+G   V I GTSPD+ID AEDRERF  +++ L++ QP     +SE +A+  A
Sbjct: 651  ---RALEAAG---VPIIGTSPDAIDRAEDRERFQHMVERLNLRQPPNATVRSEDEAIRAA 704

Query: 803  KEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVD 862
             +IGYP+VVRPSYVLGGRAMEIVY ++ L  YL  AV+V  + PVL+D +L+ AIE+DVD
Sbjct: 705  AKIGYPLVVRPSYVLGGRAMEIVYQEDELKRYLREAVQVSNDSPVLLDHFLNCAIEMDVD 764

Query: 863  ALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCG 922
            A+ D   +VVIG IM+HIEQAGVHSGDSAC +P  ++ +   D +     K+A  L V G
Sbjct: 765  AVCDGT-DVVIGAIMQHIEQAGVHSGDSACSLPPYSLPAHIQDEMREQVKKMALELGVVG 823

Query: 923  LMNCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEV 982
            LMN Q A+    D+Y++E NPRASRTVPFVSK IG  LA  AA VM+GK+L +L FTKE+
Sbjct: 824  LMNVQLALQGE-DIYVIEVNPRASRTVPFVSKCIGVSLAMIAARVMAGKTLKELNFTKEI 882

Query: 983  IPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSG 1042
            IP   SVKEAV PF KF G D +LGPEM+STGEVMG+  +F  AFAKAQ+ A + LP  G
Sbjct: 883  IPNFYSVKEAVFPFAKFPGVDPILGPEMKSTGEVMGVGDTFGEAFAKAQMGASEVLPTGG 942

Query: 1043 TVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGD 1102
            T F+S+ D  KP +E +A+  +++GF+IV+T+GTA  +E  G+ V RV K+ EGRPH  D
Sbjct: 943  TAFISVRDDDKPLVEAVARDLINLGFEIVATAGTAKLIEAAGLKVRRVNKVTEGRPHVVD 1002

Query: 1103 MVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTV 1162
            M+ N ++ +++ T+ G      D   +RR  L +K+   TT++   A  EA++     TV
Sbjct: 1003 MIKNDEVTLIINTTEGRQ-SIADSYSIRRNALQHKIYCTTTIAAGEAICEALKFGPEKTV 1061

Query: 1163 TMTALQDF 1170
                LQD 
Sbjct: 1062 RR--LQDL 1067


>gi|422590243|ref|ZP_16664900.1| carbamoyl phosphate synthase large subunit [Pseudomonas syringae pv.
            morsprunorum str. M302280]
 gi|330877244|gb|EGH11393.1| carbamoyl phosphate synthase large subunit [Pseudomonas syringae pv.
            morsprunorum str. M302280]
          Length = 1073

 Score = 1254 bits (3246), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 629/1088 (57%), Positives = 798/1088 (73%), Gaps = 28/1088 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILILGAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPAMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  + V +++EKERPDALLPTMGGQTALN A+ L   G LEK+GVE+IGA  D 
Sbjct: 63   ATYIEPIKWQTVAKIIEKERPDALLPTMGGQTALNCALDLEREGVLEKFGVEMIGANADT 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  F +AMK+IG   P SGI ++++E  ++  ++G FP IIRP+FT+GGTGGGI
Sbjct: 123  IDKAEDRSRFDKAMKSIGQACPRSGIAHSMEEANAVLEKLG-FPCIIRPSFTMGGTGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEFE IC  GL  S T ++L+++SL+GWKEYE+EV+RD  DN +I+CSIEN DPMG
Sbjct: 182  AYNREEFEEICARGLDLSPTKELLIDESLIGWKEYEMEVVRDKKDNCIIVCSIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ LR+ S+A++REIGVE GGSNVQF + P  G ++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQILRNASLAVLREIGVETGGSNVQFGICPDTGRMVVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIA++AAKL+VGY+LD++ N+IT  KTPASFEPSIDYVVTK+PR
Sbjct: 302  PRVSRSSALASKATGFPIARVAAKLAVGYTLDELSNEITGGKTPASFEPSIDYVVTKLPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            FAFEKF  ++  LTTQMKSVGE MA+GRTFQES QKALR LE G  G       +LD   
Sbjct: 362  FAFEKFAKADARLTTQMKSVGEVMAIGRTFQESLQKALRGLEVGVCGLD----PKLDLSH 417

Query: 507  EQ----LKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLL 562
             +    LK  L VP  +R+  +  A + GM V+EI  ++ ID WFL Q ++L+  E+ + 
Sbjct: 418  PESMSTLKRELTVPGAERIWYVADAFRAGMTVEEIFAMNMIDPWFLVQIEDLVKDEEKIK 477

Query: 563  TQSVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFE 622
            T  +S + +D  Y +KR+GFSD ++A     TEK +R  R  L V P YKRVDTCAAEF 
Sbjct: 478  TLGLSAIDRDLMYRLKRKGFSDARLAKLVGVTEKNLRTHRHKLDVFPVYKRVDTCAAEFA 537

Query: 623  ANTPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIM 682
             +T Y+YS+Y+ ECE+ P+ + K++ILGGGPNRIGQGIEFDYCC H + +L+  GYETIM
Sbjct: 538  TDTAYLYSTYEEECEANPSTRDKIMILGGGPNRIGQGIEFDYCCVHAALALREDGYETIM 597

Query: 683  MNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYL 742
            +N NPETVSTDYDTSDRLYFEP+T+EDVL ++ +E+P G+IVQ+GGQTPLKL+       
Sbjct: 598  VNCNPETVSTDYDTSDRLYFEPVTLEDVLEIVRVEKPRGVIVQYGGQTPLKLA------- 650

Query: 743  DEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIA 802
               R   A+G   V I GTSPD+ID AEDRERF  +++ L++ QP     +SE +A+  A
Sbjct: 651  ---RALEAAG---VPIIGTSPDAIDRAEDRERFQQMVERLNLRQPPNATVRSEDEAIRAA 704

Query: 803  KEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVD 862
             +IGYP+VVRPSYVLGGRAMEIVY ++ L  YL  AV+V  + PVL+D +L+ AIE+DVD
Sbjct: 705  AKIGYPLVVRPSYVLGGRAMEIVYQEDELKRYLREAVQVSNDSPVLLDHFLNCAIEMDVD 764

Query: 863  ALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCG 922
            A+ D   +VVIG IM+HIEQAGVHSGDSAC +P  ++ +   D +     K+A  L V G
Sbjct: 765  AVCDGT-DVVIGAIMQHIEQAGVHSGDSACSLPPYSLPAHIQDEMREQVKKMALELGVVG 823

Query: 923  LMNCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEV 982
            LMN Q A+    D+Y++E NPRASRTVPFVSK IG  LA  AA VM+GK+L +L FTKE+
Sbjct: 824  LMNVQLALQGE-DIYVIEVNPRASRTVPFVSKCIGVSLAMIAARVMAGKTLKELNFTKEI 882

Query: 983  IPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSG 1042
            IP   SVKEAV PF KF G D +LGPEM+STGEVMG+  +F  AFAKAQ+ A + LP  G
Sbjct: 883  IPNFYSVKEAVFPFAKFPGVDPILGPEMKSTGEVMGVGDTFGEAFAKAQMGASEVLPTGG 942

Query: 1043 TVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGD 1102
            T F+S+ D  KP +E +A+  +++GF+IV+T+GTA  +E  G+ V RV K+ EGRPH  D
Sbjct: 943  TAFISVRDDDKPLVEAVARDLINLGFEIVATAGTAKLIEAAGLKVRRVNKVTEGRPHVVD 1002

Query: 1103 MVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTV 1162
            M+ N ++ +++ T+ G      D   +RR  L +K+   TT++   A  EA++     TV
Sbjct: 1003 MIKNDEVTLIINTTEGRQ-SIADSYSIRRNALQHKIYCTTTIAAGEAICEALKFGPEKTV 1061

Query: 1163 TMTALQDF 1170
                LQD 
Sbjct: 1062 RR--LQDL 1067


>gi|394989172|ref|ZP_10382006.1| carbamoyl-phosphate synthase large subunit [Sulfuricella
            denitrificans skB26]
 gi|393791591|dbj|GAB71645.1| carbamoyl-phosphate synthase large subunit [Sulfuricella
            denitrificans skB26]
          Length = 1069

 Score = 1254 bits (3246), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 629/1072 (58%), Positives = 797/1072 (74%), Gaps = 23/1072 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILI+GAGPIVIGQACEFDYSG QACKAL+EEGY+VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIKSILIIGAGPIVIGQACEFDYSGAQACKALREEGYKVILVNSNPATIMTDPEMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+T ++VE+++  ERPD LLPTMGGQTALN A+ LA  G LEKYGVE+IGA  +A
Sbjct: 63   VTYIEPITWQVVEKIIAVERPDVLLPTMGGQTALNCALDLARHGVLEKYGVEMIGATKEA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR+ FK+AM+ IG+  P + I ++L+E + +   +G +P IIRP+FT+GG+GGGI
Sbjct: 123  IDKAEDREKFKKAMEKIGLDCPRAAIAHSLEEALQVQAMVG-YPTIIRPSFTMGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYNKEEF  IC+ GL AS T ++L+E+S++GWKE+E+EV+RD  DN +IIC+IEN D MG
Sbjct: 182  AYNKEEFLEICERGLDASPTKELLIEESVIGWKEFEMEVVRDKKDNCIIICAIENFDAMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTD+EYQ +R+ S+A++REIGVE GGSNVQF +NP DG ++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDREYQIMRNASLAVLREIGVETGGSNVQFGINPDDGRMVVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITK-KTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT  +TPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGYTLDELQNDITGGRTPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            FAFEKFP +   LTTQMKSVGE MA+GRTFQES QKALR LE G  G+      E   D 
Sbjct: 362  FAFEKFPRANSRLTTQMKSVGEVMAIGRTFQESLQKALRGLEVGSDGF-----DEKTTDR 416

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
            E ++  L  P PDR+  I  AM+ GM  +EIH L+ +D WFL Q  +L+  EQ L  +S+
Sbjct: 417  EVIEAELGNPGPDRIWYIADAMRCGMSQEEIHTLTHVDPWFLAQMADLVAREQALSGRSL 476

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
              +  ++   +KRRGFSD ++A     ++  VR  R SLGV P YKRVDTCAAEF  +T 
Sbjct: 477  DLLNVNEMRVLKRRGFSDLRLAKLLGVSQHAVRAHRHSLGVRPVYKRVDTCAAEFATDTA 536

Query: 627  YMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSN 686
            YMYS+Y+ ECES P+ KKK+++LGGGPNRIGQGIEFDYCC H + +++  G+ETIM+N N
Sbjct: 537  YMYSTYEEECESEPSNKKKIMVLGGGPNRIGQGIEFDYCCVHAALAMREDGFETIMVNCN 596

Query: 687  PETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHR 746
            PETVSTDYDTS+RLYFEPLT+EDVL V+ +E+P G+IVQ+GGQTPLKL+          R
Sbjct: 597  PETVSTDYDTSNRLYFEPLTLEDVLEVVAVEKPFGVIVQYGGQTPLKLA----------R 646

Query: 747  LPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEIG 806
               A+G   V I GTSPD IDAAEDRERF  I++EL ++QP    A++  +A+ +A+EIG
Sbjct: 647  DLEANG---VPIIGTSPDMIDAAEDRERFQRILQELGLKQPPNRTARTPEEAIRLAEEIG 703

Query: 807  YPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALAD 866
            YP+VVRPSYVLGGRAMEIV+    L  Y+  AV+V  + PVL+D++L+DA E+DVDA++D
Sbjct: 704  YPLVVRPSYVLGGRAMEIVHQQVDLERYMREAVKVSNDSPVLLDRFLNDATEVDVDAISD 763

Query: 867  SCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNC 926
               +V+IGG+MEHIE+AGVHSGDSAC +P  ++S    D +   T+ +AK L V GLMN 
Sbjct: 764  GT-DVLIGGLMEHIEEAGVHSGDSACSLPPYSLSPEIQDEMRRQTVLMAKALKVVGLMNV 822

Query: 927  QYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPKH 986
            Q+AI     VY+LE NPRASRTVPFVSKA G  LAK AA  M+G++L + G T+EV+P +
Sbjct: 823  QFAIQGE-TVYVLEVNPRASRTVPFVSKAAGLQLAKIAARCMAGRTLKEQGITREVVPPY 881

Query: 987  VSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVFL 1046
             SVKEAV PF KF G D +LGPEM+STGEVMG+  +F  AF K+Q+A G+KLP SG  F+
Sbjct: 882  YSVKEAVFPFIKFPGVDTILGPEMKSTGEVMGVGATFAEAFVKSQLATGEKLPSSGRAFI 941

Query: 1047 SLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVAN 1106
            S+    K  +  IA+   + GF +V+T GTA  L   G+ V  V K+HEGRPH  DM+ N
Sbjct: 942  SVRGSDKDKVLDIARILAEQGFNLVATRGTAAALSSAGLTVTPVNKVHEGRPHIVDMIKN 1001

Query: 1107 GQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLK 1158
            G I ++V T   D     D   +R   L  K+   TT++GA A    I+ +K
Sbjct: 1002 GDINLIVNTVE-DKRGVHDSYVMRNAALQNKITYYTTLAGARAACAGIKHMK 1052


>gi|404400431|ref|ZP_10992015.1| carbamoyl phosphate synthase large subunit [Pseudomonas fuscovaginae
            UPB0736]
          Length = 1073

 Score = 1254 bits (3246), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 629/1088 (57%), Positives = 802/1088 (73%), Gaps = 28/1088 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILILGAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPAMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+    V +++EKERPDALLPTMGGQTALN A+ L   G LEK+GVE+IGA  D 
Sbjct: 63   ATYIEPIKWRTVAKIIEKERPDALLPTMGGQTALNCALDLEREGILEKFGVEMIGANADT 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  F +AMK+IG+  P SGI ++++E  ++  ++G FP IIRP+FT+GGTGGGI
Sbjct: 123  IDKAEDRSRFDKAMKSIGLACPRSGIAHSMEEANAVLEKLG-FPCIIRPSFTMGGTGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEFE IC  GL  S T ++L+++SL+GWKEYE+EV+RD  DN +I+CSIEN DPMG
Sbjct: 182  AYNREEFEEICARGLDLSPTKELLIDESLIGWKEYEMEVVRDKKDNCIIVCSIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ LR+ S+A++REIGVE GGSNVQF + P  G ++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQILRNASLAVLREIGVETGGSNVQFGICPDTGRMVVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT  KTPASFEPSIDYVVTK+PR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGYTLDELSNDITGGKTPASFEPSIDYVVTKLPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGW----GCSNVKEL 502
            FAFEKF  ++  LTTQMKSVGE MA+GRTFQES QKALR LE G  G       SN + +
Sbjct: 362  FAFEKFGQADARLTTQMKSVGEVMAIGRTFQESLQKALRGLEVGVCGLDEKVDLSNPESM 421

Query: 503  DWDWEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLL 562
                  LK  L VP  +R+  +  A + G+ V+EI  ++ ID WFL Q ++L+  E+ + 
Sbjct: 422  GV----LKRELTVPGAERIWYVADAFRAGLSVEEIFGMNMIDPWFLVQIEDLVKEEERVK 477

Query: 563  TQSVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFE 622
            T  +S++ +D  + +KR+GFSD+++A     TEK +R  R  L V P YKRVDTCAAEF 
Sbjct: 478  TLGLSSIDRDLMFRLKRKGFSDQRLAKLLGVTEKNLRTHRQKLEVFPVYKRVDTCAAEFA 537

Query: 623  ANTPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIM 682
             +T Y+YS+Y+ ECE+ P+ + K++ILGGGPNRIGQGIEFDYCC H + +L+  GYETIM
Sbjct: 538  TDTAYLYSTYEEECEANPSTRDKIMILGGGPNRIGQGIEFDYCCVHAALALRDDGYETIM 597

Query: 683  MNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYL 742
            +N NPETVSTDYDTSDRLYFEP+T+EDVL ++ +E+P+G+IVQ+GGQTPLKL+       
Sbjct: 598  VNCNPETVSTDYDTSDRLYFEPVTLEDVLEIVRVEKPKGVIVQYGGQTPLKLA------- 650

Query: 743  DEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIA 802
               R   A+G   V I GTSPD+ID AEDRERF  +++ L++ QP     +SE +A+  A
Sbjct: 651  ---RALEAAG---VPIIGTSPDAIDRAEDRERFQQMVERLNLRQPPNATVRSEDEAVRAA 704

Query: 803  KEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVD 862
             +IGYP+VVRPSYVLGGRAMEIVY +E L  YL  AV+V  + PVL+D +L+ AIE+DVD
Sbjct: 705  GKIGYPLVVRPSYVLGGRAMEIVYKEEELKRYLREAVQVSNDSPVLLDHFLNCAIEMDVD 764

Query: 863  ALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCG 922
            A++D   +VVIG IM+HIEQAGVHSGDSAC +P  ++ +   D +     K+A  L V G
Sbjct: 765  AVSDGT-DVVIGAIMQHIEQAGVHSGDSACSLPPYSLPAHIQDEMREQVKKMALELGVIG 823

Query: 923  LMNCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEV 982
            LMN Q A+    D+Y++E NPRASRTVPFVSK IG  LA  AA VM+GK+L +LGFTKE+
Sbjct: 824  LMNVQLALQGE-DIYVIEVNPRASRTVPFVSKCIGVSLAMIAARVMAGKTLKELGFTKEI 882

Query: 983  IPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSG 1042
            IP   SVKEAV PF KF G D +LGPEM+STGEVMG+  +F  AFAKAQ+ A + LP  G
Sbjct: 883  IPNFYSVKEAVFPFAKFPGVDPILGPEMKSTGEVMGVGDTFGEAFAKAQMGASEVLPTGG 942

Query: 1043 TVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGD 1102
            T F+S+ D  KP +  +A+  +++GF++V+T+GTA  +E  G+ V RV K+ EGRPH  D
Sbjct: 943  TAFISVRDDDKPLVAGVARDLINLGFEVVATAGTAKLIEAAGLKVRRVNKVTEGRPHVVD 1002

Query: 1103 MVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTV 1162
            M+ N ++ +++ T+ G      D   +RR  L +K+   TT++   A  EA++     TV
Sbjct: 1003 MIKNDEVTLIINTTEGRQ-SIADSYSIRRNALQHKIYCTTTIAAGEAICEALKFGPEKTV 1061

Query: 1163 TMTALQDF 1170
                LQD 
Sbjct: 1062 RR--LQDL 1067


>gi|392402337|ref|YP_006438949.1| carbamoyl-phosphate synthase large subunit [Turneriella parva DSM
            21527]
 gi|390610291|gb|AFM11443.1| carbamoyl-phosphate synthase large subunit [Turneriella parva DSM
            21527]
          Length = 1121

 Score = 1254 bits (3245), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 642/1111 (57%), Positives = 810/1111 (72%), Gaps = 70/1111 (6%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            +RTDL+KI+I+G+GPIVIGQACEFDYSGTQA KALK+EGYEVILINSNPATIMTDP LAD
Sbjct: 3    RRTDLKKIMIIGSGPIVIGQACEFDYSGTQAVKALKQEGYEVILINSNPATIMTDPELAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
            R Y+ P++   + +++E+ERPDALLPT+GGQTALN A+AL+ +G L++YGVELIGA   A
Sbjct: 63   RVYVEPISLPYLTRIIEQERPDALLPTVGGQTALNAALALSHAGVLKQYGVELIGANEAA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            IKKAEDR LFK+AM+ IG   P SGI  +L+E +++ + IG  P I+RP+FTLGG+GGGI
Sbjct: 123  IKKAEDRKLFKEAMEKIGAAMPESGIVTSLEEALALIDRIG-LPAILRPSFTLGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
             YN+EE+ A+    L  S T QVL+++S+LGWKEYELEVMRD+ADNVVIICSIEN+DPMG
Sbjct: 182  CYNREEYIAMVTKALTESPTHQVLIDQSILGWKEYELEVMRDVADNVVIICSIENLDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAP QTL+D EYQ LRD SI IIREIGVE GGSN+QFAVNP DG++M++EMN
Sbjct: 242  VHTGDSITVAPQQTLSDVEYQNLRDLSIKIIREIGVETGGSNIQFAVNPRDGQIMIVEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRF 447
            PRVSRSSALASKATGFPIAK+AA LSVGY+LD+I NDITKKTPASFEP+IDYVVTKIPRF
Sbjct: 302  PRVSRSSALASKATGFPIAKIAALLSVGYTLDEISNDITKKTPASFEPTIDYVVTKIPRF 361

Query: 448  AFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDWE 507
             FEKFP ++ +L TQM+SVGEAMA+GRTF ESFQKA+RSLE G  GWG      L+   E
Sbjct: 362  TFEKFPETQRVLDTQMRSVGEAMAIGRTFAESFQKAMRSLETGRYGWGADG--NLETTLE 419

Query: 508  QLKY------------SLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELI 555
             L+              + VP+  R+  +  A+ +   +DE+++ +FIDKWFLTQ K ++
Sbjct: 420  ILRIGDEATQRRHILEKISVPSDTRILYLREALARNFALDEVYQRTFIDKWFLTQLKRIL 479

Query: 556  DVEQFLLT--QSVSNMTKDDFYEVKRRGFSDKQIAFAT---------------------- 591
            DVE  +    +S   ++K+   E K+ GF D+Q+AF +                      
Sbjct: 480  DVENRVREAYRSQKTISKELMREAKQAGFHDRQLAFLSAFDQIEKMTHELARMEPGSSAY 539

Query: 592  -----------KSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTPYMYSSYDFECESAP 640
                       ++ E  +R  RL     P YKRVDTCAAEFE+ TPYMY +Y+ E E+  
Sbjct: 540  MARMSDITQILQAQEAAIRGARLEAKETPVYKRVDTCAAEFESFTPYMYGTYETENEAEI 599

Query: 641  TQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSNPETVSTDYDTSDRL 700
            + + KV+ILGGGPNRIGQGIEFDYCCCH S++LQ  G E+IM+NSNPETVSTDYDTSDRL
Sbjct: 600  SDRAKVMILGGGPNRIGQGIEFDYCCCHASYALQEIGIESIMVNSNPETVSTDYDTSDRL 659

Query: 701  YFEPLTVEDVLNVIDLERP----EGIIVQFGGQTPLKLSLPIHQYLDEHRLPSASGDGLV 756
            YFEPLTVEDV+++ D E+     +G+I+QFGGQTPLKL+  +          SA+G   V
Sbjct: 660  YFEPLTVEDVMHIHDQEKQSGDLKGVILQFGGQTPLKLAKAL----------SANG---V 706

Query: 757  RIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEIGYPVVVRPSYV 816
            +I GTS ++I+ AEDR  FN +I +L ++QP+G +A S  +ALA A E+GYPV+ RPS+V
Sbjct: 707  KILGTSVENIERAEDRRLFNDLIDKLKLKQPRGRMAASLEEALAAATEVGYPVLARPSFV 766

Query: 817  LGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALADSCGNVVIGGI 876
            LGGRAM IV+T++ L  Y++ +VEV  ERPVLID++LS A+E+DVDAL+D   +V I GI
Sbjct: 767  LGGRAMMIVHTEDQLRAYMQTSVEVSRERPVLIDQFLSGALEVDVDALSDG-NDVFIAGI 825

Query: 877  MEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNCQYAITTSGDV 936
            +EH+E+AGVHSGDSAC++PTK IS + LD +   T  +A  L V G +N Q+AI  S DV
Sbjct: 826  LEHVEEAGVHSGDSACILPTKNISDAILDELRKTTRAIALELKVIGCINIQFAIVGS-DV 884

Query: 937  YLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPKHVSVKEAVLPF 996
            Y+LE NPRASRTVPF+SKAI  PLAK A  +M G SL  LG TKE++P+   VKE VLPF
Sbjct: 885  YVLEVNPRASRTVPFISKAIKVPLAKIATKIMLGHSLKSLGLTKEILPELYHVKEVVLPF 944

Query: 997  EKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVFLSLNDLTKPHL 1056
            +KF G D +LGPEM+STGEVMGI  + P AF KAQ+AAGQ+LP  GT+F+S+ND +KP L
Sbjct: 945  KKFSGADTILGPEMKSTGEVMGIGRTVPEAFFKAQVAAGQRLPEKGTIFVSVNDASKPPL 1004

Query: 1057 ERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVANGQIQMMVITS 1116
                KA    G+ I++T GTA  L   GIA ERV K+HEGRPH  D V +G +Q ++I  
Sbjct: 1005 LPALKAAAAAGYTIMATDGTAQRLSEAGIATERVNKVHEGRPHVVDSVKSGSVQ-LIINI 1063

Query: 1117 SGDSLDQIDGLKLRRRGLAYKVPVITTVSGA 1147
              D   + D L++R   L Y +P  TTV  A
Sbjct: 1064 PTDIKTRNDALEIRLSALQYSIPYFTTVEAA 1094


>gi|114330475|ref|YP_746697.1| carbamoyl-phosphate synthase large subunit [Nitrosomonas eutropha
            C91]
 gi|114307489|gb|ABI58732.1| carbamoyl-phosphate synthase large subunit [Nitrosomonas eutropha
            C91]
          Length = 1065

 Score = 1254 bits (3245), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 626/1075 (58%), Positives = 796/1075 (74%), Gaps = 28/1075 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTDL+ ILI+GAGPIVIGQACEFDYSG QAC+AL+EEGY VILINSNPATIMTDP L D
Sbjct: 3    KRTDLKSILIIGAGPIVIGQACEFDYSGVQACRALREEGYRVILINSNPATIMTDPELTD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+T ++VE+V+E ERPDALLPTMGGQTALN A+ L   G LEKYGV LIGA  +A
Sbjct: 63   ATYIEPITWQVVEKVIEIERPDALLPTMGGQTALNCALDLVRHGVLEKYGVVLIGASREA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I  AEDR+ FKQAM  IG+++  S + ++++E +     IG +P+IIRP+FTLGG+GGGI
Sbjct: 123  IDMAEDREKFKQAMTRIGLQSARSAMAHSMEEAMRAQAVIG-YPVIIRPSFTLGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEF  IC+ GL AS T ++L+E+S++GWKE+E+EV+RD  DN +I+C+IENVDPMG
Sbjct: 182  AYNREEFVEICERGLEASPTRELLIEESVIGWKEFEMEVIRDKQDNCIIVCAIENVDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQR+RD SIA++REIGVE GGSNVQFA+NP +G ++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQRMRDASIAVLREIGVETGGSNVQFAINPENGNMLVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKT-PASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+L+++ NDI     PASFEP+IDYVVTK+PR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGYTLNELGNDIADGVIPASFEPTIDYVVTKVPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            FAFEKFP +   LTTQMKSVGE MA+GRTFQES QKALR LE G  G     + E   D 
Sbjct: 362  FAFEKFPQANDRLTTQMKSVGEVMAIGRTFQESLQKALRGLETGVDG-----LDEKTADT 416

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
            E +K  L  P P+R+  +  A +  +  DE+H L+ ID WFL Q ++L+  EQ L  + +
Sbjct: 417  EIIKAELGHPGPERLWYVADAFRCNVPFDEVHALTRIDPWFLVQIEDLVRQEQALTGRQL 476

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
            + + + +  ++KR GFSD+++A    +++ +VR +R  L + P YKRVDTCAAEF+  T 
Sbjct: 477  ATLDRSELRQLKRSGFSDRRLAVLLDTSQSKVRARRHQLDLRPVYKRVDTCAAEFDTQTA 536

Query: 627  YMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSN 686
            YMYS+Y+ ECES P+ KKK+++LGGGPNRIGQGIEFDYCC H + +L+   YETIM+N N
Sbjct: 537  YMYSTYEEECESRPSDKKKIMVLGGGPNRIGQGIEFDYCCVHAALALREDQYETIMINCN 596

Query: 687  PETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHR 746
            PETVSTDYD SDRLYFEPLT+EDVL ++ +E+P G+IVQ+GGQTPLKL+    + L+E+ 
Sbjct: 597  PETVSTDYDVSDRLYFEPLTLEDVLEIVAVEKPVGVIVQYGGQTPLKLA----RELEENE 652

Query: 747  LPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEIG 806
            +P         I GTSPD ID AEDRERF A+++ L ++QP    A++   ALA A  IG
Sbjct: 653  VP---------IIGTSPDMIDCAEDRERFQAMLQGLGLKQPPNFTARTPETALAAADNIG 703

Query: 807  YPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALAD 866
            YP+VVRPSYVLGGRAMEIV+    L  Y++ AV+V  + PVL+D YL++AIE+DVDA+ D
Sbjct: 704  YPLVVRPSYVLGGRAMEIVHEARDLERYMQEAVKVSNDSPVLLDHYLNNAIEVDVDAIFD 763

Query: 867  SCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNC 926
                V++GGIMEHIEQAGVHSGDSAC +P  ++S+S  D +   T  +A+ LNV GLMN 
Sbjct: 764  G-ETVLVGGIMEHIEQAGVHSGDSACSLPPFSLSTSLQDELRRQTGAMARALNVRGLMNI 822

Query: 927  QYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPKH 986
            Q+AI  +  VY+LE NPRASRTVPFVSKA G  LAK AA  M+G++L D G T+EV   H
Sbjct: 823  QFAIQDNV-VYVLEVNPRASRTVPFVSKATGLQLAKIAARCMAGRTLADQGITREVHLAH 881

Query: 987  VSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVFL 1046
             SVKEAV PF KF G D +LGPEM+STGEVMGI  +F  AF K+Q+AAG +LP+SG VF+
Sbjct: 882  FSVKEAVFPFAKFSGVDTILGPEMKSTGEVMGIGKTFAEAFFKSQLAAGVQLPVSGNVFI 941

Query: 1047 SLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVAN 1106
            S+ D  KP +  IA   + +GF + +T GTA+ L   G+ V  V K+ EGRPH  DM+ N
Sbjct: 942  SVRDGDKPEVVSIAARLIKLGFSLYATKGTAYSLSQAGLPVVTVNKVAEGRPHIVDMIKN 1001

Query: 1107 GQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGA------LANAEAIR 1155
             +I +++ T S       D   +RR  L  +    TTV+GA      +AN + +R
Sbjct: 1002 DEISLILNTVSNKRSAVRDSYSIRRAALQARTTYYTTVAGARAACTGMANCQELR 1056


>gi|289624591|ref|ZP_06457545.1| carbamoyl phosphate synthase large subunit [Pseudomonas syringae pv.
            aesculi str. NCPPB 3681]
 gi|289646950|ref|ZP_06478293.1| carbamoyl phosphate synthase large subunit [Pseudomonas syringae pv.
            aesculi str. 2250]
 gi|422583403|ref|ZP_16658528.1| carbamoyl phosphate synthase large subunit [Pseudomonas syringae pv.
            aesculi str. 0893_23]
 gi|330868235|gb|EGH02944.1| carbamoyl phosphate synthase large subunit [Pseudomonas syringae pv.
            aesculi str. 0893_23]
          Length = 1073

 Score = 1254 bits (3245), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 628/1088 (57%), Positives = 800/1088 (73%), Gaps = 28/1088 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILILGAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPAMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  + V +++EKERPDALLPTMGGQTALN A+ L   G LEK+GVE+IGA  D 
Sbjct: 63   ATYIEPIKWQTVAKIIEKERPDALLPTMGGQTALNCALDLEREGVLEKFGVEMIGANADT 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  F +AMK+IG+  P SGI ++++E  ++  ++G FP IIRP+FT+GGTGGGI
Sbjct: 123  IDKAEDRSRFDKAMKSIGLACPRSGIAHSMEEANAVLEKLG-FPCIIRPSFTMGGTGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEFE IC  GL  S T ++L+++SL+GWKEYE+EV+RD  DN +I+CSIEN DPMG
Sbjct: 182  AYNREEFEEICARGLDLSPTKELLIDESLIGWKEYEMEVVRDKKDNCIIVCSIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ LR+ S+A++REIGVE GGSNVQF + P  G ++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQILRNASLAVLREIGVETGGSNVQFGICPDTGRMVVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIA++AAKL+VGY+LD++ N+IT  KTPASFEPSIDYVVTK+PR
Sbjct: 302  PRVSRSSALASKATGFPIARVAAKLAVGYTLDELSNEITGGKTPASFEPSIDYVVTKLPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            FAFEKF  ++  LTTQMKSVGE MA+GRTFQES QKALR LE G  G       +LD   
Sbjct: 362  FAFEKFAKADARLTTQMKSVGEVMAIGRTFQESLQKALRGLEVGVCGLD----PKLDLSH 417

Query: 507  EQ----LKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLL 562
             +    LK  L VP  +R+  +  A + GM V+EI  ++ ID WFL Q ++L+  E+ + 
Sbjct: 418  PESMSTLKRELTVPGAERIWYVADAFRAGMTVEEIFAMNMIDPWFLVQIEDLVKDEEKVK 477

Query: 563  TQSVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFE 622
            T  +S + +D  + +KR+GFSD ++A     TEK +R  R  L V P YKRVDTCAAEF 
Sbjct: 478  TLGLSAIDRDLMFRLKRKGFSDARLAKLVGVTEKNLRTHRHKLDVFPVYKRVDTCAAEFA 537

Query: 623  ANTPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIM 682
             +T Y+YS+Y+ ECE+ P+ + K++ILGGGPNRIGQGIEFDYCC H + +L+  GYETIM
Sbjct: 538  TDTAYLYSTYEEECEANPSTRDKIMILGGGPNRIGQGIEFDYCCVHAALALREDGYETIM 597

Query: 683  MNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYL 742
            +N NPETVSTDYDTSDRLYFEP+T+EDVL ++ +E+P+G+IVQ+GGQTPLKL+       
Sbjct: 598  VNCNPETVSTDYDTSDRLYFEPVTLEDVLEIVRVEKPKGVIVQYGGQTPLKLA------- 650

Query: 743  DEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIA 802
               R   A+G   V I GTSPD+ID AEDRERF  +++ L++ QP     +SE +A+  A
Sbjct: 651  ---RALEAAG---VPIIGTSPDAIDRAEDRERFQQMVERLNLRQPPNATVRSEDEAIRAA 704

Query: 803  KEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVD 862
             +IGYP+VVRPSYVLGGRAMEIVY ++ L  YL  AV+V  + PVL+D +L+ AIE+DVD
Sbjct: 705  AKIGYPLVVRPSYVLGGRAMEIVYQEDELKRYLREAVQVSNDSPVLLDHFLNCAIEMDVD 764

Query: 863  ALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCG 922
            A+ D   +VVIG IM+HIEQAGVHSGDSAC +P  ++ +   D +     K+A  L V G
Sbjct: 765  AVCDGT-DVVIGAIMQHIEQAGVHSGDSACSLPPYSLPAHIQDEMREQVKKMALELGVVG 823

Query: 923  LMNCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEV 982
            LMN Q A+    D+Y++E NPRASRTVPFVSK IG  LA  AA VM+GK+L +L FTKE+
Sbjct: 824  LMNVQLALQGE-DIYVIEVNPRASRTVPFVSKCIGVSLAMIAARVMAGKTLKELNFTKEI 882

Query: 983  IPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSG 1042
            IP   SVKEAV PF KF G D +LGPEM+STGEVMG+  +F  AFAKAQ+ A + LP  G
Sbjct: 883  IPNFYSVKEAVFPFAKFPGVDPILGPEMKSTGEVMGVGDTFGEAFAKAQMGASEVLPTGG 942

Query: 1043 TVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGD 1102
            T F+S+ D  KP +E +A+  +++GF+IV+T+GTA  +E  G+ V RV K+ EGRPH  D
Sbjct: 943  TAFISVRDDDKPLVEAVARDLINLGFEIVATAGTAKLIEAAGLKVRRVNKVTEGRPHVVD 1002

Query: 1103 MVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTV 1162
            M+ N ++ +++ T+ G      D   +RR  L +K+   TT++   A  EA++     TV
Sbjct: 1003 MIKNDEVTLIINTTEGRQ-SIADSYSIRRNALQHKIYCTTTIAAGEAICEALKFGPEKTV 1061

Query: 1163 TMTALQDF 1170
                LQD 
Sbjct: 1062 RR--LQDL 1067


>gi|403050924|ref|ZP_10905408.1| carbamoyl-phosphate synthase large subunit [Acinetobacter bereziniae
            LMG 1003]
          Length = 1077

 Score = 1254 bits (3245), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 620/1076 (57%), Positives = 792/1076 (73%), Gaps = 24/1076 (2%)

Query: 86   LGKRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGL 145
            + KRTD++ ILI+GAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +
Sbjct: 1    MAKRTDIKSILIIGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPTM 60

Query: 146  ADRTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKL 205
            AD TYI P+T + V  ++EKERPDA+LPTMGGQTALN A+AL  +G L+KY VELIGA  
Sbjct: 61   ADATYIEPITWQTVAAIIEKERPDAVLPTMGGQTALNCALALDANGILKKYNVELIGATK 120

Query: 206  DAIKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGG 265
            +AI+KAEDR LF  AM+ IG++ P + +  +++  + I    G FP+IIRP+FT+GG+GG
Sbjct: 121  EAIEKAEDRKLFDIAMRKIGLECPRADVAESMEHALEIQARFG-FPVIIRPSFTMGGSGG 179

Query: 266  GIAYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDP 325
            GIAYNKEEF  IC+ G   S T Q+L+++SL+GWKEYE+EV+RD  DN +I+C+IEN DP
Sbjct: 180  GIAYNKEEFIEICERGFDLSPTKQLLIDESLIGWKEYEMEVVRDKNDNCIIVCTIENFDP 239

Query: 326  MGVHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIE 385
            MGVHTGDSITVAPAQTLTDKE+Q LR+ S+A++REIGVE GGSNVQF +NP DG ++VIE
Sbjct: 240  MGVHTGDSITVAPAQTLTDKEFQLLRNASLAVLREIGVETGGSNVQFGINPKDGRMVVIE 299

Query: 386  MNPRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKI 444
            MNPRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT   TPASFEP+IDYVVTKI
Sbjct: 300  MNPRVSRSSALASKATGFPIAKIAAKLAVGYTLDELKNDITGGTTPASFEPAIDYVVTKI 359

Query: 445  PRFAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDW 504
            PRF FEKFP ++  LTTQMKSVGE MA+GR FQES QKALR LE G  G+        + 
Sbjct: 360  PRFNFEKFPQADATLTTQMKSVGEVMAIGRNFQESVQKALRGLEVGTCGFDEQIAVGTEG 419

Query: 505  DWEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQ 564
              +++   L+VP PDR+  +  A + G  ++E+   + ID+WFL Q +++I  E+ + T 
Sbjct: 420  AKDKILVELKVPGPDRIWYVADAFRHGFTLEEVFAATNIDRWFLIQIEDIIKTEEQIKTL 479

Query: 565  SVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEAN 624
               ++  D+    KR+G SD +IA     ++K+ R+ R +LGV P YKRVDTCAAEFE++
Sbjct: 480  GFGDLNADNIRSFKRKGLSDLRIANLMGISQKQFRKHRWNLGVYPVYKRVDTCAAEFESD 539

Query: 625  TPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMN 684
            T YMYS+YD ECES P+ K K++++GGGPNRIGQGIEFDYCC H + +++  GYETIM+N
Sbjct: 540  TAYMYSTYDEECESNPSSKDKIMVIGGGPNRIGQGIEFDYCCVHAALAMREDGYETIMVN 599

Query: 685  SNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDE 744
             NPETVSTDYDTSDRLYFEP+T+EDVL ++  E+P+GIIVQ+GGQTPLKL+    + L+E
Sbjct: 600  CNPETVSTDYDTSDRLYFEPITLEDVLEIVRTEKPKGIIVQYGGQTPLKLA----RALEE 655

Query: 745  HRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKE 804
               P         I GTSPD+ID AEDRERF  +++ L++ QP   I KS  + +A A +
Sbjct: 656  AGAP---------IIGTSPDAIDRAEDRERFQQMVQRLNLRQPSNSIVKSAEEGMAEASK 706

Query: 805  IGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDAL 864
            +GYP+VVRPSYVLGGRAMEIVY D+ L  YL +AV+   E PVL+D +L DA E+DVD +
Sbjct: 707  VGYPLVVRPSYVLGGRAMEIVYNDDELKRYLRDAVQASNEAPVLLDHFLDDATEVDVDCV 766

Query: 865  ADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLM 924
            +D   +VVIGGIM+HIEQAG+HSGDSAC IP  ++S    D +   T+ +AK L V GLM
Sbjct: 767  SDG-KDVVIGGIMQHIEQAGIHSGDSACSIPPYSLSQEIQDEMRRQTVAMAKELGVIGLM 825

Query: 925  NCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIP 984
            N Q+A+    DVY+LE NPRASRTVPFVSK IG  LAK AA  M+G+SL   GFTKE+IP
Sbjct: 826  NVQFAV-KGNDVYILEVNPRASRTVPFVSKCIGESLAKVAARCMAGQSLESQGFTKEIIP 884

Query: 985  KHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGT- 1043
             H +VKEAV PF KF G D +LGPEM+STGEVMG+  +F  AF KA + +  +LP   T 
Sbjct: 885  THFAVKEAVFPFNKFPGVDPILGPEMKSTGEVMGVGKTFGEAFYKAVLGSNDRLPGKPTE 944

Query: 1044 -----VFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRP 1098
                 VF+S+ D  KP    IAK  +D+GFKI++T GT   ++  GI  ERV K+ EGRP
Sbjct: 945  GEVKHVFISVRDSDKPRAPGIAKQLVDLGFKIIATGGTYDVIKDAGIECERVNKVTEGRP 1004

Query: 1099 HAGDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAI 1154
            +  D + NG+I +++ T+ G    Q D   +RR  L  KV   TT++GA A  +A+
Sbjct: 1005 NIVDRLKNGEIHLIINTTEGKQAQQ-DSFSIRRSALQGKVYYTTTLNGADAVCQAL 1059


>gi|71733927|ref|YP_276322.1| carbamoyl phosphate synthase large subunit [Pseudomonas syringae pv.
            phaseolicola 1448A]
 gi|71554480|gb|AAZ33691.1| carbamoyl-phosphate synthase, large subunit [Pseudomonas syringae pv.
            phaseolicola 1448A]
          Length = 1073

 Score = 1254 bits (3245), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 628/1088 (57%), Positives = 800/1088 (73%), Gaps = 28/1088 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILILGAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPAMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  + V +++EKERPDALLPTMGGQTALN A+ L   G LEK+GVE+IGA  D 
Sbjct: 63   ATYIEPIKWQTVAKIIEKERPDALLPTMGGQTALNCALDLEREGVLEKFGVEMIGANADT 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  F +AMK+IG+  P SGI ++++E  ++  ++G FP IIRP+FT+GGTGGGI
Sbjct: 123  IDKAEDRSRFDKAMKSIGLACPRSGIAHSMEEANAVLEKLG-FPCIIRPSFTMGGTGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEFE IC  GL  S T ++L+++SL+GWKEYE+EV+RD  DN +I+CSIEN DPMG
Sbjct: 182  AYNREEFEEICARGLDLSPTKELLIDESLIGWKEYEMEVVRDKKDNCIIVCSIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ LR+ S+A++REIGVE GGSNVQF + P  G ++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQILRNASLAVLREIGVETGGSNVQFGICPDTGRMVVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIA++AAKL+VGY+LD++ N+IT  KTPASFEPSIDYVVTK+PR
Sbjct: 302  PRVSRSSALASKATGFPIARVAAKLAVGYTLDELSNEITGGKTPASFEPSIDYVVTKLPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            FAFEKF  ++  LTTQMKSVGE MA+GRTFQES QKALR LE G  G       +LD   
Sbjct: 362  FAFEKFAKADARLTTQMKSVGEVMAIGRTFQESLQKALRGLEVGVCGLD----PKLDLSH 417

Query: 507  EQ----LKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLL 562
             +    LK  L VP  +R+  +  A + GM V+EI  ++ ID WFL Q ++L+  E+ + 
Sbjct: 418  PESMSTLKRELTVPGAERIWYVADAFRAGMTVEEIFAMNMIDPWFLVQIEDLVKDEEKVK 477

Query: 563  TQSVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFE 622
            T  +S + +D  + +KR+GFSD ++A     TEK +R  R  L V P YKRVDTCAAEF 
Sbjct: 478  TLGLSAIDRDLMFRLKRKGFSDARLAKLVGVTEKNLRTHRHKLDVFPVYKRVDTCAAEFA 537

Query: 623  ANTPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIM 682
             +T Y+YS+Y+ ECE+ P+ + K++ILGGGPNRIGQGIEFDYCC H + +L+  GYETIM
Sbjct: 538  TDTAYLYSTYEEECEANPSARDKIMILGGGPNRIGQGIEFDYCCVHAALALREDGYETIM 597

Query: 683  MNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYL 742
            +N NPETVSTDYDTSDRLYFEP+T+EDVL ++ +E+P+G+IVQ+GGQTPLKL+       
Sbjct: 598  VNCNPETVSTDYDTSDRLYFEPVTLEDVLEIVRVEKPKGVIVQYGGQTPLKLA------- 650

Query: 743  DEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIA 802
               R   A+G   V I GTSPD+ID AEDRERF  +++ L++ QP     +SE +A+  A
Sbjct: 651  ---RALEAAG---VPIIGTSPDAIDRAEDRERFQQMVERLNLRQPPNATVRSEDEAIRAA 704

Query: 803  KEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVD 862
             +IGYP+VVRPSYVLGGRAMEIVY ++ L  YL  AV+V  + PVL+D +L+ AIE+DVD
Sbjct: 705  AKIGYPLVVRPSYVLGGRAMEIVYQEDELKRYLREAVQVSNDSPVLLDHFLNCAIEMDVD 764

Query: 863  ALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCG 922
            A+ D   +VVIG IM+HIEQAGVHSGDSAC +P  ++ +   D +     K+A  L V G
Sbjct: 765  AVCDGT-DVVIGAIMQHIEQAGVHSGDSACSLPPYSLPAHIQDEMREQVKKMALELGVVG 823

Query: 923  LMNCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEV 982
            LMN Q A+    D+Y++E NPRASRTVPFVSK IG  LA  AA VM+GK+L +L FTKE+
Sbjct: 824  LMNVQLALQGE-DIYVIEVNPRASRTVPFVSKCIGVSLAMIAARVMAGKTLKELNFTKEI 882

Query: 983  IPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSG 1042
            IP   SVKEAV PF KF G D +LGPEM+STGEVMG+  +F  AFAKAQ+ A + LP  G
Sbjct: 883  IPNFYSVKEAVFPFAKFPGVDPILGPEMKSTGEVMGVGDTFGEAFAKAQMGASEVLPTGG 942

Query: 1043 TVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGD 1102
            T F+S+ D  KP +E +A+  +++GF+IV+T+GTA  +E  G+ V RV K+ EGRPH  D
Sbjct: 943  TAFISVRDDDKPLVEAVARDLINLGFEIVATAGTAKLIEAAGLKVRRVNKVTEGRPHVVD 1002

Query: 1103 MVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTV 1162
            M+ N ++ +++ T+ G      D   +RR  L +K+   TT++   A  EA++     TV
Sbjct: 1003 MIKNDEVTLIINTTEGRQ-SIADSYSIRRNALQHKIYCTTTIAAGEAICEALKFGPEKTV 1061

Query: 1163 TMTALQDF 1170
                LQD 
Sbjct: 1062 RR--LQDL 1067


>gi|225024768|ref|ZP_03713960.1| hypothetical protein EIKCOROL_01655 [Eikenella corrodens ATCC 23834]
 gi|224942475|gb|EEG23684.1| hypothetical protein EIKCOROL_01655 [Eikenella corrodens ATCC 23834]
          Length = 1069

 Score = 1254 bits (3245), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 623/1085 (57%), Positives = 802/1085 (73%), Gaps = 24/1085 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTDL+ ILI+GAGPIVIGQACEFDYSG QACKAL+EEGY+VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDLKSILIIGAGPIVIGQACEFDYSGAQACKALREEGYKVILVNSNPATIMTDPEMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  + VE+++ KERPDA+LPTMGGQTALN A+ LA +G L KY VELIGA  DA
Sbjct: 63   VTYIEPIMWQTVEKIIAKERPDAILPTMGGQTALNCALDLARNGVLAKYNVELIGATEDA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  FK+AM+ IG+  P S + +T++E ++   ++G FP +IRP+FT+GG+GGGI
Sbjct: 123  IDKAEDRGRFKEAMEKIGLSCPKSFVCHTMNEALAAQEQVG-FPTLIRPSFTMGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYNK+EF AIC+ G  AS T ++L+E+S+LGWKEYE+EV+RD ADN +IICSIEN DPMG
Sbjct: 182  AYNKDEFLAICERGFDASPTHELLIEQSVLGWKEYEMEVVRDKADNCIIICSIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGV+ GGSNVQFAVNP +GE++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQIMRNASLAVLREIGVDTGGSNVQFAVNPENGEMIVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VG++LD++ NDIT  +TPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGFTLDELRNDITGGRTPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            FAFEKFP ++  LTTQMKSVGE MA+GRT QESFQKALR LE G  G+   +      D 
Sbjct: 362  FAFEKFPAADDRLTTQMKSVGEVMAMGRTIQESFQKALRGLETGLCGFNPRS-----EDK 416

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
             +++  L  P P+RM  +  A + G  + EIHE+  ID WFL Q ++L+  EQ +    +
Sbjct: 417  AEIRRELANPGPERMLFVADAFRAGFTLKEIHEICAIDPWFLAQIEDLVKEEQQVSAGCL 476

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
             ++       +KR+GFSDK+IA      EK VRE R +L + P YKRVDTCAAEF   T 
Sbjct: 477  QDLDFAALRRLKRKGFSDKRIAQLLGVKEKAVREHRYALKLHPVYKRVDTCAAEFATETA 536

Query: 627  YMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSN 686
            Y+YS+Y+ ECE+ P+ +KKV+ILGGGPNRIGQGIEFDYCC H + +L+ +G+ETIM+N N
Sbjct: 537  YLYSTYEEECEARPSDRKKVMILGGGPNRIGQGIEFDYCCVHAALALRESGFETIMVNCN 596

Query: 687  PETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHR 746
            PETVSTD+DTSDRLYFEPLT+EDVL ++  E P G+IV +GGQTPLKL+           
Sbjct: 597  PETVSTDFDTSDRLYFEPLTLEDVLEIVRTENPWGVIVHYGGQTPLKLA----------- 645

Query: 747  LPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEIG 806
              +A  +  V I GTS DSIDAAEDRERF  ++ +L + QP   IA +E +AL  A+EIG
Sbjct: 646  --NALVENGVNIIGTSADSIDAAEDRERFQKVLNDLGLRQPPNRIAHNEEEALVKAEEIG 703

Query: 807  YPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALAD 866
            YP+VVRPSYVLGGRAM++V++ E L  Y+  AV+V  + PVL+D +L++AIE+DVD ++D
Sbjct: 704  YPLVVRPSYVLGGRAMQVVHSAEELQKYMREAVQVSEDSPVLLDFFLNNAIEVDVDCVSD 763

Query: 867  SCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNC 926
               +VVIGGIM+H+EQAG+HSGDS C +P  ++S    D I   T  +A  L V GLMN 
Sbjct: 764  G-KDVVIGGIMQHVEQAGIHSGDSGCSLPPYSLSEEIQDEIRRQTKAMAYALGVVGLMNV 822

Query: 927  QYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPKH 986
            Q+A+   G V++LE NPRASRTVPFVSKA G PLAK  A  M+G SL + G  KEV+P  
Sbjct: 823  QFAV-QDGVVFVLEVNPRASRTVPFVSKATGVPLAKVGARCMAGISLQEQGVEKEVVPDF 881

Query: 987  VSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVFL 1046
             +VKEAV PF KF G D +LGPEMRSTGEVMG+  +F  A+ KAQ+ AG+++P +G +FL
Sbjct: 882  YAVKEAVFPFIKFPGVDTILGPEMRSTGEVMGVGETFGEAYLKAQLGAGERMPATGKIFL 941

Query: 1047 SLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVAN 1106
            S+ +  KP + + A+ F  +G+ + +T GTA +L+  G+ V+ V K+ EGRPH  D + N
Sbjct: 942  SVREEDKPLIVKTAQNFQALGYGVCATRGTAGYLKEHGVVVQAVNKVPEGRPHIVDAIKN 1001

Query: 1107 GQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTVTMTA 1166
            G+I ++V T +       D   +RR  L  +VP  TTV+G  A +E ++S   N + + +
Sbjct: 1002 GEIALVVNTVASSPQSVADSHSIRRSALTQRVPQYTTVAGGEAMSEGMKSF--NLLGVYS 1059

Query: 1167 LQDFF 1171
            +QD  
Sbjct: 1060 VQDLL 1064


>gi|398961642|ref|ZP_10678856.1| carbamoyl-phosphate synthase, large subunit [Pseudomonas sp. GM30]
 gi|398152225|gb|EJM40750.1| carbamoyl-phosphate synthase, large subunit [Pseudomonas sp. GM30]
          Length = 1073

 Score = 1254 bits (3245), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 628/1088 (57%), Positives = 804/1088 (73%), Gaps = 28/1088 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILILGAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPDMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  + V +++EKERPDA+LPTMGGQTALN A+ L   G LEK+GVE+IGA  D 
Sbjct: 63   ATYIEPIKWQTVAKIIEKERPDAVLPTMGGQTALNCALDLEREGVLEKFGVEMIGANADT 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  F +AMK+IG++ P SGI ++++E  ++   +G FP IIRP+FT+GGTGGGI
Sbjct: 123  IDKAEDRSRFDKAMKSIGLECPRSGIAHSMEEANAVLERLG-FPCIIRPSFTMGGTGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEFE IC  GL  S T ++L+++SL+GWKEYE+EV+RD  DN +I+CSIEN DPMG
Sbjct: 182  AYNREEFEEICARGLDLSPTKELLIDESLIGWKEYEMEVVRDKKDNCIIVCSIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ LR+ S+A++REIGVE GGSNVQF + P  G ++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQILRNASLAVLREIGVETGGSNVQFGICPDTGRMVVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT  KTPASFEPSIDYVVTK+PR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGYTLDELSNDITGGKTPASFEPSIDYVVTKLPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            FAFEKF  ++  LTTQMKSVGE MA+GRTFQES QKALR LE G  G      ++LD   
Sbjct: 362  FAFEKFANADARLTTQMKSVGEVMAIGRTFQESLQKALRGLEVGVCGLD----EKLDLSN 417

Query: 507  EQ----LKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLL 562
             +    LK  L VP  +R+  +  A + GM V++I  ++ ID WFL Q ++LI  E+ + 
Sbjct: 418  PESMSILKRELTVPGAERIWYVADAFRAGMTVEDIFGMNMIDPWFLVQIEDLIKDEEKVK 477

Query: 563  TQSVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFE 622
            T  +S + +D  +++KR+GFSD+++A     TEK +R  R  L V P YKRVDTCAAEF 
Sbjct: 478  TLGLSAIDRDLMFKLKRKGFSDQRLAKLLGVTEKNLRTHRQKLEVFPVYKRVDTCAAEFA 537

Query: 623  ANTPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIM 682
             +T Y+YS+Y+ ECE+AP+ + K++ILGGGPNRIGQGIEFDYCC H + +L+  GYETIM
Sbjct: 538  TDTAYLYSTYEEECEAAPSGRDKIMILGGGPNRIGQGIEFDYCCVHAALALREDGYETIM 597

Query: 683  MNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYL 742
            +N NPETVSTDYDTSDRLYFEP+T+EDVL +  +E+P+G+IVQ+GGQTPLKL+       
Sbjct: 598  VNCNPETVSTDYDTSDRLYFEPVTLEDVLEICRVEKPKGVIVQYGGQTPLKLA------- 650

Query: 743  DEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIA 802
               R   A+G   V I GTSPD+ID AEDRERF  +++ L++ QP     +SE +A+  A
Sbjct: 651  ---RALEAAG---VPIIGTSPDAIDRAEDRERFQQMVERLNLRQPPNATVRSEDEAVRAA 704

Query: 803  KEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVD 862
             +IGYP+VVRPSYVLGGRAMEIVY ++ L  YL +AV+V  + PVL+D +L+ AIE+DVD
Sbjct: 705  AKIGYPLVVRPSYVLGGRAMEIVYKEDELKRYLRDAVQVSNDSPVLLDHFLNCAIEMDVD 764

Query: 863  ALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCG 922
            A+ D   +VVIG IM+HIEQAGVHSGDSAC +P  ++ +   D +     K+A  L V G
Sbjct: 765  AVCDG-KDVVIGAIMQHIEQAGVHSGDSACSLPPYSLPAHIQDEMREQVKKMALELGVVG 823

Query: 923  LMNCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEV 982
            LMN Q A+    D+Y++E NPRASRTVPFVSK IG  LA  AA VM+GK+L ++GFTKE+
Sbjct: 824  LMNVQLALQGE-DIYVIEVNPRASRTVPFVSKCIGVSLAMIAARVMAGKTLKEIGFTKEI 882

Query: 983  IPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSG 1042
            IP   SVKEAV PF KF G D +LGPEM+STGEVMG+  +F  AFAKAQ+ A + LP  G
Sbjct: 883  IPNFYSVKEAVFPFAKFPGVDPILGPEMKSTGEVMGVGDTFGEAFAKAQMGASEVLPTGG 942

Query: 1043 TVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGD 1102
            T F+S+ D  KP +  +A+  +++GF++V+T+GTA  +E  G+ V RV K+ EGRPH  D
Sbjct: 943  TAFISVRDDDKPLVAGVARDLINLGFEVVATAGTAKLIEAAGLKVRRVNKVTEGRPHVVD 1002

Query: 1103 MVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTV 1162
            M+ N ++ +++ T+ G      D   +RR  L +K+   TT++   A  EA++     TV
Sbjct: 1003 MIKNDEVTLIINTTEGRQ-SIADSYSIRRNALQHKIYCTTTIAAGEAICEALKFGPEKTV 1061

Query: 1163 TMTALQDF 1170
                LQD 
Sbjct: 1062 RR--LQDL 1067


>gi|262376632|ref|ZP_06069860.1| carbamoyl-phosphate synthase, large subunit [Acinetobacter lwoffii
            SH145]
 gi|262308342|gb|EEY89477.1| carbamoyl-phosphate synthase, large subunit [Acinetobacter lwoffii
            SH145]
          Length = 1076

 Score = 1254 bits (3244), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 623/1076 (57%), Positives = 793/1076 (73%), Gaps = 24/1076 (2%)

Query: 86   LGKRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGL 145
            + KRTD++ ILI+GAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +
Sbjct: 1    MAKRTDIKSILIIGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPTM 60

Query: 146  ADRTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKL 205
            AD TYI P+T + V  ++EKERPDA+LPTMGGQTALN A+AL E G LEK+ VELIGA  
Sbjct: 61   ADATYIEPITWQTVAAIIEKERPDAVLPTMGGQTALNCALALDEHGILEKFNVELIGATK 120

Query: 206  DAIKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGG 265
            +AI+KAEDR LF QAM+ IG++ P + +  +++  + I    G FP+IIRP+FT+GG+GG
Sbjct: 121  EAIEKAEDRKLFDQAMRKIGLECPKADVAESMEHALEIQARFG-FPVIIRPSFTMGGSGG 179

Query: 266  GIAYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDP 325
            GIAYNKEEF  IC+ G   S T Q+L+++SL+GWKEYE+EV+RD  DN +I+C+IEN DP
Sbjct: 180  GIAYNKEEFIEICERGFDLSPTKQLLIDESLIGWKEYEMEVVRDKNDNCIIVCTIENFDP 239

Query: 326  MGVHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIE 385
            MGVHTGDSITVAPAQTLTDKE+Q LR+ S+A++REIGVE GGSNVQF + P  G ++VIE
Sbjct: 240  MGVHTGDSITVAPAQTLTDKEFQLLRNASLAVLREIGVETGGSNVQFGICPNTGRMVVIE 299

Query: 386  MNPRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITK-KTPASFEPSIDYVVTKI 444
            MNPRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT   TPASFEP+IDYVVTKI
Sbjct: 300  MNPRVSRSSALASKATGFPIAKIAAKLAVGYTLDELKNDITGGTTPASFEPAIDYVVTKI 359

Query: 445  PRFAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDW 504
            PRF FEKFP ++  LTTQMKSVGE MA+GR FQES QKALR LE G SG+        + 
Sbjct: 360  PRFNFEKFPQADATLTTQMKSVGEVMAIGRNFQESVQKALRGLEVGASGFDEKIEVGAEG 419

Query: 505  DWEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQ 564
              +++   L+VP P+R+  +  A + G  +DE+   + ID+WFL Q +++I  E  + T 
Sbjct: 420  ARDKILQELKVPGPERIWYVGDAFRHGFTLDEVFAATNIDRWFLIQIEDIIKTENQIKTL 479

Query: 565  SVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEAN 624
               ++  D+    KR+G SD +IA     ++K+ R+ R +LGV P YKRVDTCAAEFE++
Sbjct: 480  GFGDLNADNIRGFKRKGLSDLRIADLMGISQKQFRKHRWNLGVTPVYKRVDTCAAEFESD 539

Query: 625  TPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMN 684
            T YMYS+YD ECE+ P+ K K++++GGGPNRIGQGIEFDYCC H + +++  GYETIM+N
Sbjct: 540  TAYMYSTYDEECEANPSAKDKIMVIGGGPNRIGQGIEFDYCCVHAALAMREDGYETIMVN 599

Query: 685  SNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDE 744
             NPETVSTDYDTSDRLYFEP+T+EDVL ++ +E+P+GIIVQ+GGQTPLKL+    + L+E
Sbjct: 600  CNPETVSTDYDTSDRLYFEPITLEDVLEIVRIEKPKGIIVQYGGQTPLKLA----RALEE 655

Query: 745  HRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKE 804
               P         I GTSPD+ID AEDRERF  +I+ L + QP   I KS  + +A A +
Sbjct: 656  AGAP---------IIGTSPDAIDRAEDRERFQQMIQRLQLRQPNNSIVKSAEEGMAEASK 706

Query: 805  IGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDAL 864
            +GYP+VVRPSYVLGGRAMEIVY DE L  YL +AV+   E PVL+D++L DAIE+DVD +
Sbjct: 707  VGYPLVVRPSYVLGGRAMEIVYNDEELKRYLRDAVQASNEAPVLLDRFLDDAIEVDVDCV 766

Query: 865  ADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLM 924
            +D   +VVIGGIM+HIEQAG+HSGDSAC IP  ++S    D +   T+ +AK L V GLM
Sbjct: 767  SDG-KDVVIGGIMQHIEQAGIHSGDSACSIPPYSLSKEIQDEMRRQTVAMAKELGVIGLM 825

Query: 925  NCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIP 984
            N Q+A+    DVY+LE NPRASRTVPFVSK IG  LAK AA  M+G+SL   GFT E+IP
Sbjct: 826  NVQFAVKGE-DVYILEVNPRASRTVPFVSKCIGESLAKVAARCMAGQSLESQGFTTEIIP 884

Query: 985  KHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQK---LPLS 1041
            +H SVKEAV PF KF G D +LGPEM+STGEVMG+  +F  AF KA + A ++   LP  
Sbjct: 885  EHFSVKEAVFPFNKFPGVDPILGPEMKSTGEVMGVGKTFGEAFYKAVLGANERLPGLPTE 944

Query: 1042 GTV---FLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRP 1098
            G V   F+S+ D  KP    IAK  +D+GFKI++T GT   +   G+  ERV K+ EGRP
Sbjct: 945  GEVKHAFISVRDSDKPRAAGIAKQLIDLGFKILATDGTFKVISDAGLECERVNKVTEGRP 1004

Query: 1099 HAGDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAI 1154
            +  D + NG+I +++ T+ G    Q D   +RR  L  KV   TT++GA A  +A+
Sbjct: 1005 NIVDRIKNGEIHLVINTTEGKKA-QEDSFSIRRSALQGKVYNTTTLNGADAVCQAL 1059


>gi|110833179|ref|YP_692038.1| carbamoyl phosphate synthase large subunit [Alcanivorax borkumensis
            SK2]
 gi|110646290|emb|CAL15766.1| carbamoyl-phosphate synthase, large subunit [Alcanivorax borkumensis
            SK2]
          Length = 1072

 Score = 1254 bits (3244), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 624/1084 (57%), Positives = 800/1084 (73%), Gaps = 20/1084 (1%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KR+DL+ ILI+GAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRSDLKSILIIGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPAMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+T + V +++EKERPDALLPTMGGQTALN A+ L  +G L+++GVE+IGA  DA
Sbjct: 63   ATYIEPITWQTVAKIIEKERPDALLPTMGGQTALNCALDLDHNGVLKEFGVEMIGATEDA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  F +AMK+IG++ P S I + ++E  +    +G FP IIRP+FT+GG+GGG+
Sbjct: 123  IDKAEDRSRFDKAMKSIGLECPRSAIAHNMEEASAALESLG-FPCIIRPSFTMGGSGGGV 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEFE IC+ GL  S T+++L+++SLLGWKEYE+EV+RD  DN +I+CSIEN DPMG
Sbjct: 182  AYNREEFEEICQRGLDLSPTNELLIDESLLGWKEYEMEVVRDKKDNCIIVCSIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKE Q +RD S+A++REIGVE GGSNVQF +NP +G ++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKELQIMRDASLAVLREIGVETGGSNVQFGINPDNGRMVVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITK-KTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ N+IT  KTPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGYTLDELQNEITGGKTPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            F FEKF  ++ +LTTQMKSVGE MA+GR FQES QKALR LE    G+            
Sbjct: 362  FNFEKFAEADAVLTTQMKSVGEVMAIGRNFQESVQKALRGLETESIGFDPHVDPAAPDAR 421

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
            EQ+   L  P P+R+  +  A + GM VD++  ++ ID+W+L Q ++LI  EQ L+  + 
Sbjct: 422  EQVAQLLATPGPERIWIVGDAFRVGMTVDDVFNITKIDRWYLVQIEDLIRAEQQLVDSTF 481

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
            S++T+D  Y +KR+GFSD ++A      E +VR KR  L V+P YKRVDTCAAEF  +T 
Sbjct: 482  SSLTRDSLYALKRKGFSDARLAQLLGVKEADVRGKREELNVLPIYKRVDTCAAEFATDTA 541

Query: 627  YMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSN 686
            YMYSSYD ECE+ P+ + K++++GGGPNRIGQGIEFDYCC H +F+++  GYE IM+N N
Sbjct: 542  YMYSSYDEECEANPSDRDKIMVIGGGPNRIGQGIEFDYCCVHAAFAMKDDGYEAIMVNCN 601

Query: 687  PETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHR 746
            PETVSTDYDTSDRLYFEP+T+EDVL ++  E+P+G+IVQ+GGQTPLKL+          R
Sbjct: 602  PETVSTDYDTSDRLYFEPITLEDVLAIVAKEKPKGVIVQYGGQTPLKLA----------R 651

Query: 747  LPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEIG 806
               A+G   V I GT PD+ID AEDRERF  ++ +L ++QP    A+S  D + +A+EIG
Sbjct: 652  ALQAAG---VPIIGTPPDAIDEAEDRERFQQMVNKLGLKQPPNRTARSMEDGVRLAEEIG 708

Query: 807  YPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALAD 866
            YP+VVRPSYVLGGRAMEIVY +  L  Y+ NAV V  + PVL+D++L DAIE+DVDA+ D
Sbjct: 709  YPLVVRPSYVLGGRAMEIVYGEAELRNYMMNAVSVSNDSPVLLDRFLDDAIEVDVDAVCD 768

Query: 867  SCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNC 926
               +VVIGGIM+HIEQAGVHSGDSAC +P  ++     D +      +A  L V GLMN 
Sbjct: 769  GT-DVVIGGIMQHIEQAGVHSGDSACSLPPYSLDDDVQDVMRQQAADMALELGVVGLMNV 827

Query: 927  QYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPKH 986
            Q+A+  +G+VY+LE NPRASRTVP+VSK IG  LAK AA  M+G SL + GFT+EV P+H
Sbjct: 828  QFAV-KNGEVYVLEVNPRASRTVPYVSKCIGVSLAKVAARCMAGTSLKEQGFTEEVKPQH 886

Query: 987  VSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVFL 1046
              VKEAV PF KF   D +LGPEM+STGEVMG+  +F  AF KA + AG+KLP +GT F+
Sbjct: 887  YFVKEAVFPFAKFPKVDPILGPEMKSTGEVMGVGETFAEAFGKASLGAGEKLPETGTAFI 946

Query: 1047 SLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVAN 1106
            S+ ++ KP    +A+  ++ GF +V+T GTA  L   G+ V+ V K+ EGRPH  DM+ N
Sbjct: 947  SVREVDKPASVEVARMLIERGFSLVATKGTAKVLGEAGLEVKVVNKVLEGRPHIVDMIKN 1006

Query: 1107 GQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTVTMTA 1166
             QI ++V T+ G    + D   +RR  L +KV   TT++ A A  +A+    S   T+  
Sbjct: 1007 DQIALIVNTTEGKQATR-DSFAIRRSALQHKVFYTTTIAAAHAVCQALGI--SGEPTVRR 1063

Query: 1167 LQDF 1170
            LQD 
Sbjct: 1064 LQDL 1067


>gi|146308635|ref|YP_001189100.1| carbamoyl phosphate synthase large subunit [Pseudomonas mendocina
            ymp]
 gi|145576836|gb|ABP86368.1| carbamoyl-phosphate synthase large subunit [Pseudomonas mendocina
            ymp]
          Length = 1073

 Score = 1254 bits (3244), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 624/1088 (57%), Positives = 807/1088 (74%), Gaps = 28/1088 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILILGAGPIVIGQACEFDYSG QACKALKEEG+ VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIKSILILGAGPIVIGQACEFDYSGAQACKALKEEGFRVILVNSNPATIMTDPAMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+    V +++EKERPDALLPTMGGQTALN A+ L   G LEK+GVE+IGA  D 
Sbjct: 63   ATYIEPIKWATVAKIIEKERPDALLPTMGGQTALNCALDLERHGVLEKFGVEMIGANADT 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  F +AMK IG+  P SGI ++++E   +   +G FP IIRP+FT+GGTGGGI
Sbjct: 123  IDKAEDRSRFDKAMKDIGLACPRSGIAHSMEEAYGVLEMVG-FPCIIRPSFTMGGTGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEFE IC  GL  S T+++L+++SL+GWKEYE+EV+RD  DN +I+CSIEN DPMG
Sbjct: 182  AYNREEFEEICARGLDLSPTNELLIDESLIGWKEYEMEVVRDKKDNCIIVCSIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGVE GGSNVQF + P  G ++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQIMRNASLAVLREIGVETGGSNVQFGICPNTGRMVVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT  +TPASFEP+IDYVVTK+PR
Sbjct: 302  PRVSRSSALASKATGFPIAKIAAKLAVGYTLDELSNDITGGRTPASFEPAIDYVVTKVPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            FAFEKFP ++  LTTQMKSVGE MA+GRTFQES QKALR LE G +G+      +LD + 
Sbjct: 362  FAFEKFPKADARLTTQMKSVGEVMAIGRTFQESVQKALRGLEVGVAGFD----PKLDLND 417

Query: 507  EQLKYSLR----VPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLL 562
             + + +LR    VP+ DR+  +  A + G  V E+ EL+ ID+WFL Q ++L+  E+ + 
Sbjct: 418  PEAESTLRRELTVPSADRIWYVADAFRAGKTVAEVFELTRIDEWFLVQIEDLVKDEEKVK 477

Query: 563  TQSVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFE 622
            T  +S +  D  +++KR+GFSD ++A     +EK +R  R  L V+P YKRVDTCAAEF 
Sbjct: 478  TLGLSAIDYDLMFKLKRKGFSDARLAKLLGVSEKSLRAHRHKLKVLPVYKRVDTCAAEFA 537

Query: 623  ANTPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIM 682
             +T YMYS+Y+ ECE+ P+ + K++ILGGGPNRIGQGIEFDYCC H + +++  GYETIM
Sbjct: 538  TDTAYMYSTYEEECEANPSSRDKIMILGGGPNRIGQGIEFDYCCVHAALAMREDGYETIM 597

Query: 683  MNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYL 742
            +N NPETVSTDYDTSDRLYFEP+T+EDVL ++ +E+P+G+IVQ+GGQTPLK    I + L
Sbjct: 598  VNCNPETVSTDYDTSDRLYFEPVTLEDVLEIVRVEQPKGVIVQYGGQTPLK----ICRAL 653

Query: 743  DEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIA 802
            +E  +P         I GTSP++ID AEDRERF  +++ L++ QP    A+SE +ALA++
Sbjct: 654  EEAGVP---------IIGTSPEAIDRAEDRERFQQMVQRLNLRQPANATARSEDEALALS 704

Query: 803  KEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVD 862
            K IGYP+VVRPSYVLGGRAMEIVY +E L  Y+  AV+V  + PVL+D++L+ AIE+DVD
Sbjct: 705  KGIGYPMVVRPSYVLGGRAMEIVYQEEELKRYMREAVKVSNDSPVLLDRFLNCAIEVDVD 764

Query: 863  ALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCG 922
            A++D    VVIG IM+HIEQAGVHSGDSAC +P  ++ +   D I     K+A  L V G
Sbjct: 765  AVSDG-ETVVIGAIMQHIEQAGVHSGDSACSLPPYSLPAHIQDEIREQVKKMALELGVVG 823

Query: 923  LMNCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEV 982
            LMN Q A+    D+Y++E NPRASRTVPFVSK +G  LAK AA VM+GK+L ++G+T+E+
Sbjct: 824  LMNVQMAVQGE-DIYVIEVNPRASRTVPFVSKCVGESLAKVAARVMAGKTLAEVGYTQEI 882

Query: 983  IPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSG 1042
            IP   SVKEAV PF KF G D +LGPEM+STGEVMG+  SF  AFAKAQ+ A + LP SG
Sbjct: 883  IPPFFSVKEAVFPFAKFPGVDPILGPEMKSTGEVMGVGDSFGEAFAKAQLGASEILPNSG 942

Query: 1043 TVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGD 1102
              F+S+ +  K    ++A+  + +GF++V+T+GTA  +E  G+ V RV K+ EGRPH  D
Sbjct: 943  CAFISVREDDKAEAVQVARDLVSLGFEVVATAGTAKVIEAAGLPVRRVNKVTEGRPHVVD 1002

Query: 1103 MVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTV 1162
            M+ N ++ +++ T+ G      D   +RR  L +K+   TT++   A  EA++     TV
Sbjct: 1003 MIKNDEVTLIINTTEGRQ-SIADSYSIRRNALQHKIYCTTTIAAGQAVCEALKFGPEKTV 1061

Query: 1163 TMTALQDF 1170
                LQD 
Sbjct: 1062 RR--LQDL 1067


>gi|398837036|ref|ZP_10594349.1| carbamoyl-phosphate synthase, large subunit [Herbaspirillum sp.
            YR522]
 gi|398209605|gb|EJM96275.1| carbamoyl-phosphate synthase, large subunit [Herbaspirillum sp.
            YR522]
          Length = 1077

 Score = 1254 bits (3244), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 637/1081 (58%), Positives = 813/1081 (75%), Gaps = 29/1081 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KR D++ ILI+GAGPI+IGQACEFDYSG QACKAL+EEG++VIL+NSNPATIMTDP +AD
Sbjct: 3    KRNDIKSILIIGAGPIIIGQACEFDYSGAQACKALREEGFKVILVNSNPATIMTDPEMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+T ++VE+++ KE+PDA+LPTMGGQTALN A+ L   G L+KY  ELIGA  +A
Sbjct: 63   VTYIEPITWQVVERIIAKEKPDAILPTMGGQTALNCALDLHRHGVLDKYKCELIGASPEA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  FK AM  IG+ +  SG+ +T++E  ++   +G FP+IIRP+FT+GGTGGGI
Sbjct: 123  IDKAEDRSKFKDAMTKIGLGSARSGVSHTMEESWAVQKTLG-FPVIIRPSFTMGGTGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN EEFE ICK GL AS TS++L+E+SL+GWKEYE+EV+RD ADN +I+CSIEN+DPMG
Sbjct: 182  AYNAEEFETICKRGLEASPTSELLIEESLIGWKEYEMEVVRDKADNCIIVCSIENLDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGV+ GGSNVQF+VNP DG ++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQIMRNASLAVLREIGVDTGGSNVQFSVNPADGRMIVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VG++LD++ N+IT   TPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKIAAKLAVGFTLDELRNEITGGATPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            FAFEKFP ++  LTTQMKSVGE MA+GRTFQESFQKALR LE G  G     + E   D 
Sbjct: 362  FAFEKFPQADKHLTTQMKSVGEVMAIGRTFQESFQKALRGLEVGVDG-----MNEKTTDR 416

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQ-S 565
            E ++  L  P PDR+  +  A  +G  ++E+H L+ ID+WFL+Q KE++D+E +L  + S
Sbjct: 417  ETIEEELGEPGPDRIWYVGDAFAQGFSLEEVHALTHIDRWFLSQIKEIVDIELWLEKEAS 476

Query: 566  VSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANT 625
            ++ + +   +++K++GFSD+++A   K+T+ EVR++R  LGV P +KRVDTCA EF  NT
Sbjct: 477  LTALDRATLFQLKQKGFSDRRLAKLLKTTDTEVRQQRHKLGVRPVFKRVDTCAGEFSTNT 536

Query: 626  PYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNS 685
             YMYS+YD ECES PT KKK+++LGGGPNRIGQGIEFDYCC H + +++  GYETIM+N 
Sbjct: 537  AYMYSTYDEECESNPTDKKKIMVLGGGPNRIGQGIEFDYCCVHAALAMRDDGYETIMVNC 596

Query: 686  NPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEH 745
            NPETVSTDYDTSDRLYFEPLT+EDVL ++D+E+P G+IVQ+GGQTPLKL+L +       
Sbjct: 597  NPETVSTDYDTSDRLYFEPLTLEDVLEIVDIEKPYGVIVQYGGQTPLKLALDLE------ 650

Query: 746  RLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEI 805
                A+G   V I GTSPD IDAAEDRERF  ++++L + QP    A++EADAL +A+EI
Sbjct: 651  ----ANG---VPIVGTSPDMIDAAEDRERFQKLLQDLGLRQPPNRTARTEADALRLAQEI 703

Query: 806  GYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALA 865
            GYP+VVRPSYVLGGRAMEIV+    L  Y+  AV+V  + PVL+D++L+DAIE+DVD L+
Sbjct: 704  GYPLVVRPSYVLGGRAMEIVHEQRDLERYMREAVKVSHDSPVLLDRFLNDAIEVDVDCLS 763

Query: 866  DSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMN 925
            D      IGG+MEHIEQAGVHSGDSAC +P  ++S   +D +   T  +AK LNV GLMN
Sbjct: 764  DG-ERTFIGGVMEHIEQAGVHSGDSACSLPPYSLSKDTIDELKRQTALMAKGLNVVGLMN 822

Query: 926  CQYAIT-------TSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGF 978
             Q+AI        T   V++LE NPRASRTVPFVSKA G  LAK AA  M G+SL+  G 
Sbjct: 823  VQFAIQQAEVDGKTVDTVFVLEVNPRASRTVPFVSKATGLQLAKIAARCMVGQSLDSQGI 882

Query: 979  TKEVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKL 1038
              EV+P + SVKEAV PF KF G D +LGPEM+STGEVMG+  +F  AF K+Q+ A  KL
Sbjct: 883  KNEVVPPYYSVKEAVFPFVKFPGVDTILGPEMKSTGEVMGVGKTFGEAFVKSQLGASVKL 942

Query: 1039 PLSGTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRP 1098
            P SG VFLS+ +  KP   ++A+  + +GF +V+T GTA  +   GIAV  V K+ EGRP
Sbjct: 943  PTSGKVFLSVKNNDKPRAVQVARDLVALGFSVVATKGTAAAISAAGIAVTTVNKVVEGRP 1002

Query: 1099 HAGDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLK 1158
            H  DMV N +I ++V T         D   +R   LA +V   TT++GA A  + +R L+
Sbjct: 1003 HIVDMVKNNEIALVVNTVEEKRNAIADSGAIRTSALAARVTTFTTIAGAEAAIQGMRQLE 1062

Query: 1159 S 1159
            +
Sbjct: 1063 A 1063


>gi|51246948|ref|YP_066832.1| carbamoyl-phosphate synthase, large subunit [Desulfotalea
            psychrophila LSv54]
 gi|50877985|emb|CAG37825.1| probable carbamoyl-phosphate synthase, large subunit [Desulfotalea
            psychrophila LSv54]
          Length = 1073

 Score = 1254 bits (3244), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 627/1085 (57%), Positives = 804/1085 (74%), Gaps = 20/1085 (1%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++KILI+G+GPI+I QACEFDYSG QA KALKEEGYEVILINSNPATIMTDP LAD
Sbjct: 3    KRTDIKKILIIGSGPIIISQACEFDYSGAQAVKALKEEGYEVILINSNPATIMTDPELAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+TPE V +V+ KERPDALLPT+GGQTALN A+ LAE G LE+Y VEL+ A +  
Sbjct: 63   ATYIEPITPECVTKVIAKERPDALLPTLGGQTALNTAIKLAELGVLEQYNVELLAADIAV 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            IKKAE R+ F+ AM  IG+  P S I + L+  ++   +IG FP+I+RP+FTLGGTGGGI
Sbjct: 123  IKKAEGREEFRDAMHAIGLNVPESAIVHDLESAMAAGEDIG-FPIIVRPSFTLGGTGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN++E E +C +GL  S+T++++VE+SLLGWKE+ELEVMRD  DNVVIICSIEN+D MG
Sbjct: 182  AYNRQELEELCTSGLDLSMTTEIMVERSLLGWKEFELEVMRDKNDNVVIICSIENIDAMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTD+EYQ +RD ++AIIREIGVE GGSNVQFAVNP DGE+M+IEMN
Sbjct: 242  VHTGDSITVAPAQTLTDREYQEMRDAAVAIIREIGVETGGSNVQFAVNPADGELMIIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRF 447
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT++T ASFEP+IDY V KIPR+
Sbjct: 302  PRVSRSSALASKATGFPIAKIAAKLAVGYTLDELKNDITEETYASFEPTIDYCVVKIPRW 361

Query: 448  AFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKEL--DWD 505
             FEKFP +E  L+T MKSVGE M++GRTF+E+FQKA+RSLE G +G+G  + KEL  D D
Sbjct: 362  TFEKFPEAEDKLSTAMKSVGETMSMGRTFKEAFQKAMRSLETGRAGFG-GDGKELLTDID 420

Query: 506  WEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQS 565
               L+++LR PN  R+  I+ A+K+GM ++EIHE + ID WFL  FK++++ E+ ++   
Sbjct: 421  AIDLEHNLRTPNSKRVGYIHEALKRGMSLEEIHEFTLIDPWFLYNFKQIVEKEEEIIAHG 480

Query: 566  VSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANT 625
               +  +     K  GFSD Q+ + T +TE ++R+ RL + + P YK VDTC AEFE+NT
Sbjct: 481  FQGIDAEFLRGCKEYGFSDIQLGYLTGTTEDDIRKLRLEMEIRPVYKMVDTCGAEFESNT 540

Query: 626  PYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNS 685
            PY YS+Y+ E E+  T  KK++ILGGGPNRIGQGIEFDYCC H +F+L+  G E+IM+NS
Sbjct: 541  PYYYSTYEQENEAIETSGKKIIILGGGPNRIGQGIEFDYCCVHAAFALKELGVESIMINS 600

Query: 686  NPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEH 745
            NPETVSTDYDTSD+LYFEPLT EDVLN+I+ E+P G+IVQFGGQTPL L++P+       
Sbjct: 601  NPETVSTDYDTSDKLYFEPLTREDVLNIIEQEKPYGVIVQFGGQTPLNLAVPLE------ 654

Query: 746  RLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEI 805
                   +  +RI GT PD+ID AEDR+RF   +++L + QP+     +  +ALA A  I
Sbjct: 655  -------NAGIRIIGTQPDAIDRAEDRKRFQQFLQKLGLRQPENDTVSTLEEALASANRI 707

Query: 806  GYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALA 865
            GYPVVVRPSYVLGGR M IVYTD+ +  ++      + E P+L+DK+L +AIE+DVDAL 
Sbjct: 708  GYPVVVRPSYVLGGRNMRIVYTDQGIRDFMIAVGGTNLEHPILVDKFLQEAIEVDVDALC 767

Query: 866  DSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMN 925
            D   + +IGGIMEHIE+AG+HSGDS+C++P  T+S   +  I + +  +AK L V GLMN
Sbjct: 768  DG-EDTIIGGIMEHIEEAGIHSGDSSCVLPPHTLSLELVKEIKAASKAMAKELGVIGLMN 826

Query: 926  CQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPK 985
             Q+AI     VY+LE NPRASRTVPFVSKA G PLAK A  VM G  L DLG T++    
Sbjct: 827  VQFAIKDK-QVYILEVNPRASRTVPFVSKATGVPLAKLATKVMMGARLKDLGLTRDPYID 885

Query: 986  HVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVF 1045
            H +VKEAV PF++F   D LLGPEM+STGEVMGID +  +A AKA +A+G  LP  GTVF
Sbjct: 886  HWAVKEAVFPFDRFDKVDTLLGPEMKSTGEVMGIDDNLGLAIAKAHLASGSTLPTEGTVF 945

Query: 1046 LSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVA 1105
            +S+ D  K H   +AK+ L +GF I +T+GTA +L+ K I    V K+ +GRPH  D V 
Sbjct: 946  ISVRDNDKAHSVEVAKSLLQLGFSICATAGTAQYLQDKDIDCSPVNKISQGRPHILDKVQ 1005

Query: 1106 NGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTVTMT 1165
            +GQI  ++ TS G    + D  ++RR  L Y +P  TT++GA A  +AI  L +  + + 
Sbjct: 1006 DGQIAWIINTSLGRRTTE-DSYQIRRSALDYHIPYTTTITGAAAVIKAIHDLSTKELNVQ 1064

Query: 1166 ALQDF 1170
             +Q F
Sbjct: 1065 PVQYF 1069


>gi|349611092|ref|ZP_08890405.1| carbamoyl-phosphate synthase large subunit [Neisseria sp. GT4A_CT1]
 gi|348614902|gb|EGY64439.1| carbamoyl-phosphate synthase large subunit [Neisseria sp. GT4A_CT1]
          Length = 1071

 Score = 1254 bits (3244), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 625/1070 (58%), Positives = 797/1070 (74%), Gaps = 22/1070 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTDL+ ILI+GAGPIVIGQACEFDYSG QACKAL+EEGY+VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDLKSILIIGAGPIVIGQACEFDYSGAQACKALREEGYKVILVNSNPATIMTDPEMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  + VE+++ KERPDA+LPTMGGQTALN A+ LA +G L KY VELIGA  DA
Sbjct: 63   VTYIEPIMWQTVEKIIAKERPDAILPTMGGQTALNCALDLARNGVLAKYNVELIGATEDA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  FK+AM+ IG+  P S + +T++E ++   ++G FP +IRP+FT+GG+GGGI
Sbjct: 123  IDKAEDRGRFKEAMEKIGLSCPKSFVCHTMNEALAAQEQVG-FPTLIRPSFTMGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYNK+EF AIC+ G  AS T ++L+E+S+LGWKEYE+EV+RD ADN +IICSIEN DPMG
Sbjct: 182  AYNKDEFLAICERGFDASPTHELLIEQSVLGWKEYEMEVVRDKADNCIIICSIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGV+ GGSNVQFAVNP +GE++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQIMRNASLAVLREIGVDTGGSNVQFAVNPENGEMIVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VG++LD++ NDIT  +TPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGFTLDELRNDITGGRTPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            FAFEKFP ++  LTTQMKSVGE MA+GRT QESFQKALR LE G  G+   N K    D 
Sbjct: 362  FAFEKFPAADDRLTTQMKSVGEVMAMGRTIQESFQKALRGLETGLCGF---NPK--SSDK 416

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
             +++  L  P P+RM  +  A + G  ++EIHE+  ID WFL Q ++L+  EQ +    +
Sbjct: 417  AEIRRELANPGPERMLFVADAFRVGFTLEEIHEICAIDPWFLAQIEDLVKEEQQVSAGCL 476

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
             ++       +KR+GFSDK IA      EKEVRE R +L + P YKRVDTCAAEF   T 
Sbjct: 477  QDLDFAALRRLKRKGFSDKCIAQLLGLPEKEVREHRYALKLHPVYKRVDTCAAEFATETA 536

Query: 627  YMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSN 686
            Y+YS+Y+ ECE+ P+++KKV+ILGGGPNRIGQGIEFDYCC H + +L+ +G+ETIM+N N
Sbjct: 537  YLYSTYEEECEARPSERKKVMILGGGPNRIGQGIEFDYCCVHAALALRESGFETIMVNCN 596

Query: 687  PETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHR 746
            PETVSTD+DTSDRLYFEPLT+EDVL ++  E P G+IV +GGQTPLKL+           
Sbjct: 597  PETVSTDFDTSDRLYFEPLTLEDVLEIVRTENPWGVIVHYGGQTPLKLA----------- 645

Query: 747  LPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEIG 806
              +A  +  V I GTS DSIDAAEDRERF  ++ +L + QP   IA +E +AL  A+EIG
Sbjct: 646  --NALVENGVNIIGTSADSIDAAEDRERFQKVLNDLGLRQPPNRIAHNEEEALVKAEEIG 703

Query: 807  YPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALAD 866
            YP+VVRPSYVLGGRAM++V++ E L  Y+  AV+V  + PVL+D +L++AIE+DVD ++D
Sbjct: 704  YPLVVRPSYVLGGRAMQVVHSAEELQKYMREAVQVSEDSPVLLDFFLNNAIEVDVDCVSD 763

Query: 867  SCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNC 926
               +VVIGGIM+H+EQAG+HSGDS C +P  ++S    D I   T  +A  L V GLMN 
Sbjct: 764  G-KDVVIGGIMQHVEQAGIHSGDSGCSLPPYSLSEEIQDEIRRQTKAMAYALGVVGLMNV 822

Query: 927  QYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPKH 986
            Q+A+   G V++LE NPRASRTVPFVSKA G PLAK  A  M+G SL + G  KEV+P  
Sbjct: 823  QFAV-QDGVVFVLEVNPRASRTVPFVSKATGVPLAKVGARCMAGISLQEQGVEKEVVPDF 881

Query: 987  VSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVFL 1046
             +VKEAV PF KF G D +LGPEMRSTGEVMG+  SF  A+ KAQ+ AG++L  +G +FL
Sbjct: 882  YAVKEAVFPFIKFPGVDTILGPEMRSTGEVMGVGASFGEAYYKAQLGAGERLNPTGKIFL 941

Query: 1047 SLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVAN 1106
            ++ D  KP + + A+ F  +G+ + +T GTA +L+  GI V+ V K+ EGRPH  D + N
Sbjct: 942  AVRDEDKPLIVKTAQNFQALGYGVCATRGTAEYLKEHGIIVQAVNKVQEGRPHIVDAIKN 1001

Query: 1107 GQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRS 1156
            G+I ++V T S  +    D   +RR  L  +VP  TT++G  A +E  +S
Sbjct: 1002 GEIALVVNTVSSSAQSIADSHSIRRTSLTQRVPQYTTIAGGEAMSEGAKS 1051


>gi|407366518|ref|ZP_11113050.1| carbamoyl phosphate synthase large subunit [Pseudomonas mandelii
            JR-1]
          Length = 1073

 Score = 1254 bits (3244), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 624/1088 (57%), Positives = 806/1088 (74%), Gaps = 28/1088 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILILGAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPDMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  + V +++EKERPDALLPTMGGQTALN A+ L   G LEK+GVE+IGA  D 
Sbjct: 63   ATYIEPIKWQTVAKIIEKERPDALLPTMGGQTALNCALDLEREGVLEKFGVEMIGANADT 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  F +AMK+IG+  P SGI ++++E  ++  ++G FP IIRP+FT+GGTGGGI
Sbjct: 123  IDKAEDRSRFDKAMKSIGLDCPRSGIAHSMEEANAVLEKLG-FPCIIRPSFTMGGTGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEFE IC  GL  S T ++L+++SL+GWKEYE+EV+RD  DN +I+CSIEN DPMG
Sbjct: 182  AYNREEFEEICARGLDLSPTKELLIDESLIGWKEYEMEVVRDKKDNCIIVCSIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGVE GGSNVQF + P  G ++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQIMRNASLAVLREIGVETGGSNVQFGICPDTGRMVVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIA++AAKL++GY+LD++ N+IT   TPASFEPSIDYVVTK+PR
Sbjct: 302  PRVSRSSALASKATGFPIARIAAKLAIGYTLDELQNEITGGATPASFEPSIDYVVTKLPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            FAFEKFP ++  LTTQMKSVGE MA+GRTFQES QKALR LE G  G      ++LD   
Sbjct: 362  FAFEKFPKADARLTTQMKSVGEVMAIGRTFQESLQKALRGLEVGVCGLD----EKLDLSN 417

Query: 507  EQ----LKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLL 562
             +    LK  L VP  +R+  +  A + G+ V++I  ++ ID WFL Q ++LI  E+ + 
Sbjct: 418  PESMSILKRELTVPGAERIWYVADAFRAGLSVEDIFGMNMIDPWFLVQIEDLIKDEEKVK 477

Query: 563  TQSVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFE 622
            T  ++++ +D  +++KR+GFSD ++A     TEK +R  R  L + P YKRVDTCAAEF 
Sbjct: 478  TLGLASIDRDLMFKLKRKGFSDMRLAKLLGVTEKALRRHRHKLEIFPVYKRVDTCAAEFA 537

Query: 623  ANTPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIM 682
             +T YMYS+Y+ ECE+APT + K++ILGGGPNRIGQGIEFDYCC H + +L++ GYETIM
Sbjct: 538  TDTAYMYSTYEEECEAAPTGRDKIMILGGGPNRIGQGIEFDYCCVHAALALRADGYETIM 597

Query: 683  MNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYL 742
            +N NPETVSTDYDTSDRLYFEP+T+EDVL +  +E+P+G+IVQ+GGQTPLKL+    + L
Sbjct: 598  VNCNPETVSTDYDTSDRLYFEPVTLEDVLEICRVEKPKGVIVQYGGQTPLKLA----RAL 653

Query: 743  DEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIA 802
            +E  +P         I GTSPD+ID AEDRERF  +++ L++ QP     +SE +A+  A
Sbjct: 654  EEAGVP---------IIGTSPDAIDRAEDRERFQQMVERLNLRQPPNATVRSEDEAIRAA 704

Query: 803  KEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVD 862
             +IGYP+VVRPSYVLGGRAMEIVY +E L  YL +AV+V  + PVL+D +L+ AIE+DVD
Sbjct: 705  AKIGYPLVVRPSYVLGGRAMEIVYEEEELKRYLRDAVKVSNDSPVLLDHFLNCAIEMDVD 764

Query: 863  ALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCG 922
            A+ D   +VVIG IM+HIEQAGVHSGDSAC +P  ++ +   D +     K+A  L V G
Sbjct: 765  AVCDGT-DVVIGAIMQHIEQAGVHSGDSACSLPPYSLPAHIQDEMREQVKKMALELGVVG 823

Query: 923  LMNCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEV 982
            LMN Q A+    D+Y++E NPRASRTVPFVSK IG  LA  AA VM+GK+L ++GFTKE+
Sbjct: 824  LMNVQLALQGE-DIYVIEVNPRASRTVPFVSKCIGVSLAMIAARVMAGKTLKEIGFTKEI 882

Query: 983  IPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSG 1042
            IP   SVKEAV PF KF G D +LGPEM+STGEVMG+  +F  AFAKAQ+ A + LP  G
Sbjct: 883  IPNFYSVKEAVFPFAKFPGVDPILGPEMKSTGEVMGVGDTFGEAFAKAQMGASEVLPTGG 942

Query: 1043 TVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGD 1102
            T F+S+ D  KP +  +A+  +++GF++V+T+GTA  +E  G+ V RV K+ EGRPH  D
Sbjct: 943  TAFISVRDDDKPLVAGVARDLINLGFEVVATAGTAKLIEAAGLKVRRVNKVTEGRPHVVD 1002

Query: 1103 MVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTV 1162
            M+ N ++ +++ T+ G      D   +RR  L +K+   TT++   A  EA++     TV
Sbjct: 1003 MIKNDEVTLIINTTEGRQ-SIADSYSIRRNALQHKIYCTTTIAAGEAICEALKFGPEKTV 1061

Query: 1163 TMTALQDF 1170
                LQD 
Sbjct: 1062 RR--LQDL 1067


>gi|254468615|ref|ZP_05082021.1| carbamoyl-phosphate synthase, large subunit [beta proteobacterium
            KB13]
 gi|207087425|gb|EDZ64708.1| carbamoyl-phosphate synthase, large subunit [beta proteobacterium
            KB13]
          Length = 1064

 Score = 1254 bits (3244), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 627/1067 (58%), Positives = 792/1067 (74%), Gaps = 27/1067 (2%)

Query: 86   LGKRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGL 145
            + KR D++ ILI+GAGPIVIGQACEFDYSG QACKALKEEGY VIL+NSNPATIMTDP L
Sbjct: 1    MAKREDIQSILIIGAGPIVIGQACEFDYSGAQACKALKEEGYRVILVNSNPATIMTDPNL 60

Query: 146  ADRTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKL 205
            AD TYI P+  ++VE+++ KE PDA+LPTMGGQTALN A+ L   G LEKY VELIGA  
Sbjct: 61   ADATYIEPIQWDIVEKIIAKENPDAILPTMGGQTALNCALDLDRHGILEKYNVELIGASK 120

Query: 206  DAIKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGG 265
             AI KAEDR LFK+AM  IG+ +  S I ++++E   +   IG +P+IIRP+FT+GG+GG
Sbjct: 121  QAIDKAEDRQLFKEAMNKIGLSSARSAIAHSMEEAHQVQASIG-YPVIIRPSFTMGGSGG 179

Query: 266  GIAYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDP 325
            GIAYNK+EF  IC+ GL AS T+++L+E+SLLGWKEYE+EV+RD  DN +IICSIEN+DP
Sbjct: 180  GIAYNKDEFIEICERGLDASPTNELLIEESLLGWKEYEMEVVRDKNDNCIIICSIENLDP 239

Query: 326  MGVHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIE 385
            MGVHTGDSIT+APAQTLTDKEYQ +R  SIA++REIGV+ GGSNVQFA+NP DG ++VIE
Sbjct: 240  MGVHTGDSITIAPAQTLTDKEYQIMRSASIAVLREIGVDTGGSNVQFAINPSDGRMVVIE 299

Query: 386  MNPRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKI 444
            MNPRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT  +TPASFEP+IDYVVTKI
Sbjct: 300  MNPRVSRSSALASKATGFPIAKIAAKLAVGYTLDELKNDITGGQTPASFEPTIDYVVTKI 359

Query: 445  PRFAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDW 504
            PRFAFEKFP ++  LTTQMKSVGE MA+GRTFQESFQKALR LE G  G   +       
Sbjct: 360  PRFAFEKFPKADSHLTTQMKSVGEVMAIGRTFQESFQKALRGLEIGVDGLDSTT-----D 414

Query: 505  DWEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQ 564
            D + +   LR P P+R+  +    + GM V+EIHE S ID WFL Q  E+ID+E+ L  +
Sbjct: 415  DKDLIIKELRQPGPERIWYLSDGFRLGMTVEEIHEQSKIDPWFLIQIHEIIDLEKDLYNK 474

Query: 565  SVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEAN 624
             + ++  +   E+K++GFSD +++    +T+  +R  R    + P YKRVDTCA+EFE +
Sbjct: 475  DLDSLEPETLKELKKKGFSDARLSHLLNTTQSAIRSFREQHHIRPIYKRVDTCASEFETS 534

Query: 625  TPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMN 684
            T YMYSSYD ECE++P++ KKV+ILGGGPNRIGQGIEFDYCC H S++L+  GYETIM+N
Sbjct: 535  TAYMYSSYDEECEASPSKNKKVMILGGGPNRIGQGIEFDYCCVHASYALKEEGYETIMVN 594

Query: 685  SNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDE 744
             NPETVSTDYDTSDRLYFEP+T+EDVL +I +E P+G+IVQ+GGQTPLKL+  +      
Sbjct: 595  CNPETVSTDYDTSDRLYFEPVTLEDVLEIIHIENPDGVIVQYGGQTPLKLAKGLE----- 649

Query: 745  HRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKE 804
                 A+G   V+I GT+P+ ID AEDRERF  I+ +L + QP    A++  +A+ +A E
Sbjct: 650  -----AAG---VKIVGTTPEDIDVAEDRERFQKILVDLGLNQPPNRTARTPEEAIQLAAE 701

Query: 805  IGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDAL 864
            IGYP+VVRPSYVLGGRAMEIV+ +  L  Y+  AV+V  E PVL+D++L+DA EIDVDA+
Sbjct: 702  IGYPLVVRPSYVLGGRAMEIVHEESDLQRYMTEAVKVSHESPVLLDRFLNDAQEIDVDAI 761

Query: 865  ADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLM 924
            +D   +VV+GGIM+HIEQAGVHSGDSAC +P   +S +    +   T  LAK L V GLM
Sbjct: 762  SDG-EDVVVGGIMQHIEQAGVHSGDSACSLPPFDLSETIQKDLIKQTKMLAKALKVNGLM 820

Query: 925  NCQYAITTSGD-VYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVI 983
            N Q+AI   GD +Y+LE NPRASRTVPFVSKAIG PLAK AA VM G+SL    FTKE+ 
Sbjct: 821  NIQFAI--QGDTIYILEVNPRASRTVPFVSKAIGKPLAKIAAKVMVGQSLKSQNFTKEIT 878

Query: 984  PKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGT 1043
            P+  SVKEAV PF KF G D +LGPEM+STGEVMG   +F  AF K+Q+ +   LP  G 
Sbjct: 879  PQFYSVKEAVFPFIKFPGVDTILGPEMKSTGEVMGTGDTFAEAFIKSQLGSSTTLPFKGK 938

Query: 1044 VFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDM 1103
             FLS+      ++  IA+A   +GF +V+T GTA  ++  G+ V+R+ K+ +GRPH  DM
Sbjct: 939  AFLSVRKEDHENIIDIAQALAKLGFDLVATDGTARSIQSHGLMVQRINKVAQGRPHIVDM 998

Query: 1104 VANGQIQMMV-ITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALA 1149
            + N +I  +V IT    ++   D   +RR  L  KV   TT++GA A
Sbjct: 999  IKNKEIDFIVNITEDKKAI--ADSYTIRRNALMNKVTYYTTLAGAKA 1043


>gi|385855871|ref|YP_005902384.1| carbamoyl-phosphate synthase large subunit [Neisseria meningitidis
            M01-240355]
 gi|325204812|gb|ADZ00266.1| carbamoyl-phosphate synthase, large subunit [Neisseria meningitidis
            M01-240355]
          Length = 1071

 Score = 1254 bits (3244), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 625/1070 (58%), Positives = 796/1070 (74%), Gaps = 22/1070 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTDL+ ILI+GAGPIVIGQACEFDYSGTQACKAL+EEGY+VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDLKSILIIGAGPIVIGQACEFDYSGTQACKALREEGYKVILVNSNPATIMTDPEMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  + VE+++ KERPDA+LPTMGGQTALN A+ LA +G L KY VELIGA  DA
Sbjct: 63   VTYIEPIMWQTVEKIIAKERPDAILPTMGGQTALNCALDLARNGVLAKYNVELIGATEDA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  FK+AM+ IG+  P S + +T++E ++   ++G FP +IRP+FT+GG+GGGI
Sbjct: 123  IDKAEDRGRFKEAMEKIGLSCPKSFVCHTMNEALAAQEQVG-FPTLIRPSFTMGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYNK+EF AIC+ G  AS T ++L+E+S+LGWKEYE+EV+RD  DN +IICSIEN DPMG
Sbjct: 182  AYNKDEFLAICERGFDASPTHELLIEQSVLGWKEYEMEVVRDKNDNCIIICSIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGV  GGSNVQFAVNP +GE++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQIMRNASLAVLREIGVNTGGSNVQFAVNPENGEMIVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VG++LD++ NDIT  KTPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGFTLDELRNDITGGKTPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            FAFEKFP ++  LTTQMKSVGE MA+GRT QESFQKALR LE G  G+   +      D 
Sbjct: 362  FAFEKFPAADDRLTTQMKSVGEVMAMGRTIQESFQKALRGLETGLCGFNPRS-----SDK 416

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
             +++  L  P P+RM  +  A + G  ++EIHE+  ID WFL Q ++L+  E+ +    +
Sbjct: 417  AEIRRELANPGPERMLFVADAFRAGFTLEEIHEICAIDPWFLAQIEDLMKEEKAVSDGIL 476

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
            S++       +KR+GFSDK++A     +EKEVRE R +L + P YKRVDTCAAEF   T 
Sbjct: 477  SDLDFAALRRLKRKGFSDKRLAQLLNVSEKEVREHRYALKLHPVYKRVDTCAAEFATETA 536

Query: 627  YMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSN 686
            Y+YS+Y+ ECES P+ +KKV+ILGGGPNRIGQGIEFDYCC H + +L+ +G+ETIM+N N
Sbjct: 537  YLYSTYEEECESRPSDRKKVMILGGGPNRIGQGIEFDYCCVHAALALRESGFETIMVNCN 596

Query: 687  PETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHR 746
            PETVSTD+DTSDRLYFEPLT+EDVL ++  E P G+IV +GGQTPLKL+           
Sbjct: 597  PETVSTDFDTSDRLYFEPLTLEDVLEIVRTENPWGVIVHYGGQTPLKLA----------- 645

Query: 747  LPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEIG 806
              +A  +  V I GTS DSIDAAEDRERF  ++ +L + QP   IA +E +AL  A+EIG
Sbjct: 646  --NALVENGVNIIGTSADSIDAAEDRERFQKVLNDLGLRQPPNRIAHNEEEALVKAEEIG 703

Query: 807  YPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALAD 866
            YP+VVRPSYVLGGRAM+IV++ E L  Y+  AV+V  + PVL+D +L++AIE+DVD ++D
Sbjct: 704  YPLVVRPSYVLGGRAMQIVHSAEALQKYMREAVQVSEDSPVLLDFFLNNAIEVDVDCVSD 763

Query: 867  SCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNC 926
               +VVIGGIM+H+EQAG+HSGDS C +P  ++S    D I   T  +A  L V GLMN 
Sbjct: 764  G-KDVVIGGIMQHVEQAGIHSGDSGCSLPPYSLSEEIQDEIRRQTKAMAYALGVVGLMNV 822

Query: 927  QYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPKH 986
            Q+A+   G V++LE NPRASRTVPFVSKA G PLAK  A  M+G SL + G  KEV+P  
Sbjct: 823  QFAV-QDGVVFVLEVNPRASRTVPFVSKATGVPLAKVGARCMAGISLKEQGVEKEVVPDF 881

Query: 987  VSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVFL 1046
             +VKEAV PF KF G D +LGPEMRSTGEVMG+  SF  A+ KAQ+ AG++L  +G +FL
Sbjct: 882  YAVKEAVFPFIKFPGVDTILGPEMRSTGEVMGVGASFGEAYYKAQLGAGERLNPTGKIFL 941

Query: 1047 SLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVAN 1106
            S+ +  K  + + AK F  +G+ I +T GTA +L  +G+ V+ + K+ EGRPH GD + N
Sbjct: 942  SVREEDKERVIKTAKNFQVLGYGICATRGTAQYLTEQGLIVQTINKVPEGRPHIGDALKN 1001

Query: 1107 GQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRS 1156
            G+I ++V T S D     D   +R+  L  +VP  TT +G  A +E  +S
Sbjct: 1002 GEIALVVNTVSSDPQSVSDSHIIRQSALQQRVPQYTTTAGGEAMSEGAKS 1051


>gi|443473733|ref|ZP_21063755.1| Carbamoyl-phosphate synthase large chain [Pseudomonas
            pseudoalcaligenes KF707]
 gi|442904607|gb|ELS29584.1| Carbamoyl-phosphate synthase large chain [Pseudomonas
            pseudoalcaligenes KF707]
          Length = 1073

 Score = 1254 bits (3244), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 624/1085 (57%), Positives = 803/1085 (74%), Gaps = 22/1085 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILILGAGPIVIGQACEFDYSG QACKALKEEG+ VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIKSILILGAGPIVIGQACEFDYSGAQACKALKEEGFRVILVNSNPATIMTDPAMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+    V +++EKERPDALLPTMGGQTALN A+ L   G LEK+GVE+IGA  D 
Sbjct: 63   ATYIEPIKWATVAKIIEKERPDALLPTMGGQTALNCALDLERHGVLEKFGVEMIGANADT 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  F +AMK IG+  P SGI ++++E   +   +G FP IIRP+FT+GGTGGGI
Sbjct: 123  IDKAEDRSRFDKAMKDIGLACPRSGIAHSMEEAYGVLEMVG-FPCIIRPSFTMGGTGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEFE IC  GL  S T+++L+++SL+GWKEYE+EV+RD  DN +I+C+IEN DPMG
Sbjct: 182  AYNREEFEEICARGLDLSPTNELLIDESLIGWKEYEMEVVRDKKDNCIIVCAIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGVE GGSNVQF + P  G ++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQIMRNASLAVLREIGVETGGSNVQFGICPNTGRMVVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT  +TPASFEP+IDYVVTK+PR
Sbjct: 302  PRVSRSSALASKATGFPIAKIAAKLAVGYTLDELQNDITGGRTPASFEPAIDYVVTKVPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            FAFEKFP ++  LTTQMKSVGE MA+GRTFQES QKALR LE G +G+    +   D + 
Sbjct: 362  FAFEKFPKADARLTTQMKSVGEVMAIGRTFQESVQKALRGLEVGVAGFD-PKLDLADPEA 420

Query: 507  EQ-LKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQS 565
            E  L+  L VP  +R+  +  A + G  V+++ EL+ ID+WFL Q ++L+  E+ + T  
Sbjct: 421  ESILRRELTVPGAERIWYVADAFRAGKTVEQVFELTRIDEWFLVQIEDLVKDEERIKTLG 480

Query: 566  VSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANT 625
            +S +  D   ++KR+GFSD ++A     TEK +R  R  L V+P YKRVDTCAAEF  +T
Sbjct: 481  LSGIDADLMRKLKRKGFSDARLAKLLGVTEKNLRSHRHKLKVLPVYKRVDTCAAEFATDT 540

Query: 626  PYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNS 685
             YMYS+Y+ ECE+ P+ + K++ILGGGPNRIGQGIEFDYCC H + +++  GYETIM+N 
Sbjct: 541  AYMYSTYEEECEANPSGRDKIMILGGGPNRIGQGIEFDYCCVHAALAMREDGYETIMVNC 600

Query: 686  NPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEH 745
            NPETVSTDYDTSDRLYFEP+T+EDVL ++ +E+P+G+IVQ+GGQTPLKL     + L+E 
Sbjct: 601  NPETVSTDYDTSDRLYFEPVTLEDVLEIVRVEQPKGVIVQYGGQTPLKLC----RALEEA 656

Query: 746  RLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEI 805
             +P         I GTSPD+ID AEDRERF  +++ L++ QP    A+SE +ALA++K I
Sbjct: 657  GVP---------IIGTSPDAIDRAEDRERFQQMVQRLNLRQPANATARSEDEALALSKGI 707

Query: 806  GYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALA 865
            GYP+VVRPSYVLGGRAMEIVY +E L  Y+  AV+V  + PVL+D++L+ AIE+DVDA+ 
Sbjct: 708  GYPMVVRPSYVLGGRAMEIVYQEEELKRYMREAVKVSNDSPVLLDRFLNCAIEVDVDAVC 767

Query: 866  DSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMN 925
            D    VVIG IM+HIEQAGVHSGDSAC +P  ++ +   D I     K+A  L V GLMN
Sbjct: 768  DG-ETVVIGAIMQHIEQAGVHSGDSACSLPPYSLPAHIQDEIREQVKKMALELGVVGLMN 826

Query: 926  CQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPK 985
             Q A+    D+Y++E NPRASRTVPFVSK IG  LAK AA VM+GK+L ++GFT+E+IP 
Sbjct: 827  VQMAVQGE-DIYVIEVNPRASRTVPFVSKCIGDSLAKVAARVMAGKTLAEVGFTQEIIPP 885

Query: 986  HVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVF 1045
              SVKEAV PF KF G D +LGPEM+STGEVMG+  +F  AF+KAQ+ A + LP SGT F
Sbjct: 886  FFSVKEAVFPFAKFPGVDPILGPEMKSTGEVMGVGDTFGEAFSKAQLGASEILPNSGTAF 945

Query: 1046 LSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVA 1105
            +S+ +  K     +A+  + +GF++V+T+GTA  +E  G+ V RV K+ EGRPH  DM+ 
Sbjct: 946  ISVREDDKAQAVEVARDLVSLGFEVVATAGTAKVIEAAGLPVRRVNKVTEGRPHVVDMIK 1005

Query: 1106 NGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTVTMT 1165
            N ++ +++ T+ G      D   +RR  L +K+   TT++   A  EA++     TV   
Sbjct: 1006 NDEVTLIINTTEGRQ-SIADSYSIRRNALQHKIYCTTTIAAGQAVCEALKFGPEKTVRR- 1063

Query: 1166 ALQDF 1170
             LQD 
Sbjct: 1064 -LQDL 1067


>gi|6552726|gb|AAF16526.1|AF191301_2 ADP-forming, carbamate-phosphorylating [Medicago sativa]
          Length = 1072

 Score = 1253 bits (3243), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 626/1088 (57%), Positives = 800/1088 (73%), Gaps = 28/1088 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD+  ILILGAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDINSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPAMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  + V +++EKERPD +LPTMGGQTALN A+ALA++G LEKY VELIGAK +A
Sbjct: 63   ATYIEPIEWQTVAKIIEKERPDVILPTMGGQTALNCALALAKNGVLEKYNVELIGAKEEA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I  AEDR+LF QAMK IG+    + I +TL+E      E G FP IIRP+FT+GG+GGGI
Sbjct: 123  INMAEDRNLFDQAMKRIGLSCARAKIVHTLEEAKEAPKEFG-FPCIIRPSFTMGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN +EFE IC  GL  S T+++L+++SLLGWKEYE+EV+RD  DN +I+CSIEN DPMG
Sbjct: 182  AYNWDEFEEICTRGLDLSPTNELLIDESLLGWKEYEMEVVRDKNDNCIIVCSIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ +R+ SIA++REIGVE GGSNVQFAVNPVDG ++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQIMRNASIAVLREIGVETGGSNVQFAVNPVDGRMVVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT   TPASFEPSIDYVVTK+PR
Sbjct: 302  PRVSRSSALASKATGFPIAKIAAKLAVGYTLDELKNDITGGATPASFEPSIDYVVTKVPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            F FEKF  ++  LTTQMKSVGE MA+GRTFQES QKALR LE G +G+      ++D+  
Sbjct: 362  FTFEKFGDADARLTTQMKSVGEVMAIGRTFQESLQKALRGLEVGSAGFE----SKVDYTT 417

Query: 507  EQ----LKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLL 562
            E+    ++  L     +R+  +  A + G+ V++   LS ID WFL Q KELID+EQ L 
Sbjct: 418  EEGAAKVRRELTTAGAERIWYVGDAFRMGLSVNDAFNLSKIDPWFLVQVKELIDIEQSLR 477

Query: 563  TQSVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFE 622
             +S++++  D  +++KR+GFSDK++A    STEK VR  R  L + P+YKRVDTCAAEF 
Sbjct: 478  GKSLNDLDADKLFQLKRKGFSDKRLALLLGSTEKAVRHHRQGLNIRPTYKRVDTCAAEFS 537

Query: 623  ANTPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIM 682
             +T YMYS+Y+ ECE+ P+ KKK+L++GGGPNRIGQGIEFDYCC H + +++  GYETIM
Sbjct: 538  TSTAYMYSTYEEECEANPSDKKKILVIGGGPNRIGQGIEFDYCCVHAALAMREDGYETIM 597

Query: 683  MNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYL 742
            +N NPETVSTDYDTSDRL+FEP+T+EDVL ++  E+P G+IVQFGGQTPLKL+       
Sbjct: 598  VNCNPETVSTDYDTSDRLFFEPVTLEDVLEIVHKEKPVGVIVQFGGQTPLKLA------- 650

Query: 743  DEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIA 802
               R   A G   V I GTSPD+ID AEDRERF  +I +L + QP   I +S  +AL  A
Sbjct: 651  ---RALEAEG---VPIIGTSPDAIDKAEDRERFQQMINKLGLLQPPNAIVRSLEEALLAA 704

Query: 803  KEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVD 862
             ++GYP+VVRPSYVLGGRAMEIVY ++ L TY+  AV+V  + PVL+D +L++AIE+D+D
Sbjct: 705  DKVGYPLVVRPSYVLGGRAMEIVYKEDELRTYMRTAVQVSEDAPVLLDHFLNNAIEVDID 764

Query: 863  ALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCG 922
            +++D    VVIGGIM+HIEQ GVHSGDSAC +P  ++ +   D +     K+A  L V G
Sbjct: 765  SVSDG-KQVVIGGIMQHIEQCGVHSGDSACSLPPYSLPADVQDDMREIVKKMAIELGVIG 823

Query: 923  LMNCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEV 982
            LMN Q A    G +Y++E NPRASRTVPFVSK IG  LAK AA   +G SL + GFTKE+
Sbjct: 824  LMNTQLAY-QDGKIYVIEVNPRASRTVPFVSKCIGVSLAKVAARCQAGVSLEEQGFTKEI 882

Query: 983  IPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSG 1042
            IP + SVKEAV PF KF   D +LGPEM+STGEVMG+  +F  A+ K+Q+ A  ++P SG
Sbjct: 883  IPDYFSVKEAVFPFNKFPAVDPILGPEMKSTGEVMGVGNTFGEAYGKSQLGANNRIPTSG 942

Query: 1043 TVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGD 1102
            T F+S+ D+ K  +  + K   ++GFK+V+T GTA  L+  G+ V+ V K+ EGRPH  D
Sbjct: 943  TAFISVRDMDKDGIVSVGKDLAELGFKLVATRGTAEVLQQAGLTVQIVNKVQEGRPHIVD 1002

Query: 1103 MVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTV 1162
            M+ N +I +++ T  G    + D   +RR    ++V   TT++   A   +++ +K   +
Sbjct: 1003 MIKNDEIDLIINTVEGRQATR-DSSSIRRSAENHRVYYNTTLAAGFAVCMSLKEVKD--I 1059

Query: 1163 TMTALQDF 1170
             +  LQD 
Sbjct: 1060 EVRRLQDL 1067


>gi|229592648|ref|YP_002874767.1| carbamoyl phosphate synthase large subunit [Pseudomonas fluorescens
            SBW25]
 gi|229364514|emb|CAY52369.1| carbamoyl-phosphate synthase large chain [Pseudomonas fluorescens
            SBW25]
          Length = 1073

 Score = 1253 bits (3243), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 626/1088 (57%), Positives = 803/1088 (73%), Gaps = 28/1088 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILILGAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPDMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  + V +++EKERPDALLPTMGGQTALN A+ L   G LEK+GVE+IGA  D 
Sbjct: 63   ATYIEPIKWQTVAKIIEKERPDALLPTMGGQTALNCALDLEREGVLEKFGVEMIGANADT 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  F +AMK+IG+  P SGI ++++E  S+   +G FP IIRP+FT+GGTGGGI
Sbjct: 123  IDKAEDRSRFDKAMKSIGLDCPRSGIAHSMEEANSVLERLG-FPCIIRPSFTMGGTGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEFE IC  GL  S T ++L+++SL+GWKEYE+EV+RD  DN +I+CSIEN DPMG
Sbjct: 182  AYNREEFEEICARGLDLSPTKELLIDESLIGWKEYEMEVVRDKKDNCIIVCSIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGVE GGSNVQF + P  G ++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQIMRNASLAVLREIGVETGGSNVQFGICPDTGRMVVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITK-KTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIA++AAKL++GY+LD++ N+IT   TPASFEPSIDYVVTK+PR
Sbjct: 302  PRVSRSSALASKATGFPIARIAAKLAIGYTLDELQNEITGGATPASFEPSIDYVVTKLPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            FAFEKFP ++  LTTQMKSVGE MA+GRTFQES QKALR LE G  G      ++LD   
Sbjct: 362  FAFEKFPKADARLTTQMKSVGEVMAIGRTFQESLQKALRGLEVGVCGLD----EKLDLSN 417

Query: 507  EQ----LKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLL 562
             +    LK  L VP  +R+  +  A + GM V++I  ++ ID WFL Q ++LI  E+ + 
Sbjct: 418  PESMSVLKRELTVPGAERIWYVADAFRAGMTVEDIFGMNMIDPWFLVQIEDLIKEEEKVK 477

Query: 563  TQSVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFE 622
            T  +S++ +D  + +KR+GFSD+++A     TEK +R  R  L + P YKRVDTCAAEF 
Sbjct: 478  TLGLSSIDRDLMFRLKRKGFSDQRLAKLLGVTEKNLRTHRHKLDIFPVYKRVDTCAAEFA 537

Query: 623  ANTPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIM 682
             +T YMYS+Y+ ECE+AP+ + K++ILGGGPNRIGQGIEFDYCC H + +L+  GYETIM
Sbjct: 538  TDTAYMYSTYEEECEAAPSGRDKIMILGGGPNRIGQGIEFDYCCVHAALALREDGYETIM 597

Query: 683  MNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYL 742
            +N NPETVSTDYDTSDRLYFEP+T+EDVL +  +E+P+G+IVQ+GGQTPLKL+       
Sbjct: 598  VNCNPETVSTDYDTSDRLYFEPVTLEDVLEICRVEKPKGVIVQYGGQTPLKLA------- 650

Query: 743  DEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIA 802
               R   A+G   V I GTSPD+ID AEDRERF  +++ L++ QP     +SE +A+  A
Sbjct: 651  ---RALEAAG---VPIIGTSPDAIDRAEDRERFQQMVERLNLRQPPNATVRSEDEAIRAA 704

Query: 803  KEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVD 862
             +IGYP+VVRPSYVLGGRAMEIVY ++ L  YL +AV+V  + PVL+D +L+ AIE+DVD
Sbjct: 705  SKIGYPLVVRPSYVLGGRAMEIVYEEDELKRYLRDAVKVSNDSPVLLDHFLNCAIEMDVD 764

Query: 863  ALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCG 922
            A+ D   +VVIG IM+HIEQAGVHSGDSAC +P  ++ +   D +     K+A  L V G
Sbjct: 765  AVCDGT-DVVIGAIMQHIEQAGVHSGDSACSLPPYSLPAHIQDEMREQVKKMALELGVVG 823

Query: 923  LMNCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEV 982
            LMN Q A+    D+Y++E NPRASRTVPFVSK IG  LA  AA VM+GK+L ++GFTKE+
Sbjct: 824  LMNVQLALQGE-DIYVIEVNPRASRTVPFVSKCIGVSLAMVAARVMAGKTLKEIGFTKEI 882

Query: 983  IPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSG 1042
            IP   SVKEAV PF KF G D +LGPEM+STGEVMG+  +F  AFAKAQ+ A + LP  G
Sbjct: 883  IPNFYSVKEAVFPFAKFPGVDPILGPEMKSTGEVMGVGDTFGEAFAKAQMGASEVLPTGG 942

Query: 1043 TVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGD 1102
            T F+S+ D  KP +  +A+  +++GF++V+T+GTA  +E  G+ V RV K+ EGRPH  D
Sbjct: 943  TAFISVRDDDKPLVAGVARDLINLGFEVVATAGTAKLIEAAGLKVRRVNKVTEGRPHVVD 1002

Query: 1103 MVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTV 1162
            M+ N ++ +++ T+ G      D   +RR  L +K+   TT++   A  EA++     TV
Sbjct: 1003 MIKNDEVTLIINTTEGRQ-SIADSYSIRRNALQHKIYCTTTIAAGEAICEALKFGPEKTV 1061

Query: 1163 TMTALQDF 1170
                LQD 
Sbjct: 1062 RR--LQDL 1067


>gi|94500164|ref|ZP_01306698.1| carbamoyl-phosphate synthase large subunit [Bermanella marisrubri]
 gi|94427737|gb|EAT12713.1| carbamoyl-phosphate synthase large subunit [Oceanobacter sp. RED65]
          Length = 1073

 Score = 1253 bits (3243), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 624/1086 (57%), Positives = 805/1086 (74%), Gaps = 23/1086 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD+  ILI+GAGPIVIGQACEFDYSG QACKAL+EEGY+VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIESILIIGAGPIVIGQACEFDYSGAQACKALREEGYKVILVNSNPATIMTDPSMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+T E V +++E+ERPD LLPTMGGQTALN A+ L ++G LEKYGVE+IGA  D 
Sbjct: 63   ATYIEPITVEAVTKIIEQERPDVLLPTMGGQTALNCALGLEKAGVLEKYGVEMIGANADT 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDRD F +AMK IG++ P + I +T++E   +  ++G FP IIRP+FT+GG+GGGI
Sbjct: 123  IDKAEDRDRFDKAMKKIGLECPKASIAHTMEEAWEVQKDLG-FPCIIRPSFTMGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYNKEEFE IC  GL  S T+++L+++SL+GWKEYE+EV+RD  DN +I+CSIEN DPMG
Sbjct: 182  AYNKEEFEEICTRGLDLSPTNELLIDESLIGWKEYEMEVVRDKNDNCIIVCSIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTL+DKE Q +R+ S+A++REIGVE GGSNVQF +NP +G ++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLSDKELQIMRNASLAVLREIGVETGGSNVQFGINPDNGRMVVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL++GY+LD++ NDIT  +TPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKIAAKLAIGYTLDELQNDITGGRTPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCS-NVKELDWD 505
            F FEKFP ++  LTTQMKSVGE MA+GRT QES QKALR LE G  G+    N+++ +  
Sbjct: 362  FTFEKFPQADARLTTQMKSVGEVMAIGRTQQESLQKALRGLEVGACGFDPKVNLEDPEAA 421

Query: 506  WEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQS 565
             E++   L  P  +R+  I  A + GM V+EI     +D WFL Q ++LI  E  +   +
Sbjct: 422  REKVIAELNTPGAERIWYIGDAFRLGMTVEEIFSHCKVDPWFLVQIEDLIKEEAAVAESA 481

Query: 566  VSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANT 625
            ++++ +D  + +KR+GFSD+++A     +EK  R+ R  LG+ P YKRVDTCAAEF  +T
Sbjct: 482  LTSLDEDRIFRLKRKGFSDERLAQLLSVSEKAFRKHRQKLGIRPVYKRVDTCAAEFATDT 541

Query: 626  PYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNS 685
             YMYS+Y+ ECE+ P++++K+++LGGGPNRIGQGIEFDYCC H + + +  GYE IM+N 
Sbjct: 542  AYMYSTYEEECEANPSEREKIIVLGGGPNRIGQGIEFDYCCVHAALASKEEGYEAIMVNC 601

Query: 686  NPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEH 745
            NPETVSTDYDTSDRLYFEPLT+EDVL + D E+P+G+IVQ+GGQTPLKL+         +
Sbjct: 602  NPETVSTDYDTSDRLYFEPLTLEDVLEIADKEKPKGVIVQYGGQTPLKLA---------N 652

Query: 746  RLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEI 805
             L +A     V I GTSP++ID AEDRERF  +I+ L ++QPK     SE +A+  A EI
Sbjct: 653  ELEAAG----VPIIGTSPEAIDRAEDRERFQQMIQRLGMKQPKNSTVTSEQEAIQKAAEI 708

Query: 806  GYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALA 865
            GYP+VVRPSYVLGGRAMEIV  +  LV Y+  AV+V  + PVL+D +L+ A+E+D+DA+ 
Sbjct: 709  GYPLVVRPSYVLGGRAMEIVNDETALVRYMTEAVKVSNDSPVLLDYFLNQAVEVDIDAVC 768

Query: 866  DSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMN 925
            D   +VVIG IM+HIEQAG+HSGDSAC +P  ++     D + +    +A+ L V GLMN
Sbjct: 769  DG-EDVVIGAIMQHIEQAGIHSGDSACSLPPYSLPEDVQDEMRAQVAAMARELGVVGLMN 827

Query: 926  CQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPK 985
             Q A    G++Y++E NPRASRTVPFVSK IG  LA  AA VM+GK+L +LGFT+E++P 
Sbjct: 828  TQLAY-QDGEIYVIEVNPRASRTVPFVSKCIGTSLAAIAAKVMTGKTLKELGFTEEIVPN 886

Query: 986  HVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVF 1045
            + SVKEAV PF KFQG D +LGPEM+STGEVMG   +F  AF KAQ+ AG+KLP SG VF
Sbjct: 887  YYSVKEAVFPFNKFQGVDPILGPEMKSTGEVMGAGKTFGEAFLKAQMGAGEKLPTSGKVF 946

Query: 1046 LSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVA 1105
            +S+ D  K  +  +AK    +GF++VSTSGT   L   G+ VERV K++EGRPH  DM+ 
Sbjct: 947  VSVRDADKTGVIPVAKGLEALGFELVSTSGTYKALSEAGVKVERVNKVNEGRPHIVDMIK 1006

Query: 1106 NGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTVTMT 1165
            N +I M V T+ G      D  ++RR  L +KV   TT++GA A    ++ L+S  +   
Sbjct: 1007 NDEIAMTVNTTEGPRA-IADSAEIRRSALQHKVYYTTTLAGAEA---VVKGLESGGLQSV 1062

Query: 1166 A-LQDF 1170
            A LQD 
Sbjct: 1063 ARLQDL 1068


>gi|304388391|ref|ZP_07370501.1| carbamoyl-phosphate synthase, large subunit [Neisseria meningitidis
            ATCC 13091]
 gi|304337623|gb|EFM03782.1| carbamoyl-phosphate synthase, large subunit [Neisseria meningitidis
            ATCC 13091]
          Length = 1071

 Score = 1253 bits (3243), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 624/1070 (58%), Positives = 795/1070 (74%), Gaps = 22/1070 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTDL+ ILI+GAGPIVIGQACEFDYSG QACKAL+EEGY+VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDLKSILIIGAGPIVIGQACEFDYSGAQACKALREEGYKVILVNSNPATIMTDPEMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  + VE+++ KERPDA+LPTMGGQTALN A+ LA +G L KY VELIGA  DA
Sbjct: 63   VTYIEPIMWQTVEKIIAKERPDAILPTMGGQTALNCALDLARNGVLAKYNVELIGATEDA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  FK+AM+ IG+  P S + +T++E ++   ++G FP +IRP+FT+GG+GGGI
Sbjct: 123  IDKAEDRGRFKEAMEKIGLSCPKSFVCHTMNEALAAQEQVG-FPTLIRPSFTMGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYNK+EF AIC+ G  AS T ++L+E+S+LGWKEYE+EV+RD  DN +IICSIEN DPMG
Sbjct: 182  AYNKDEFLAICERGFDASPTHELLIEQSVLGWKEYEMEVVRDKNDNCIIICSIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGV+ GGSNVQFA+NP +GE++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQIMRNASLAVLREIGVDTGGSNVQFAMNPENGEMIVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VG++LD++ NDIT  KTPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGFTLDELRNDITGGKTPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            FAFEKFP ++  LTTQMKSVGE MA+GRT QESFQKALR LE G  G+   +      D 
Sbjct: 362  FAFEKFPAADDRLTTQMKSVGEVMAMGRTIQESFQKALRGLETGLCGFNPRS-----SDK 416

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
             +++  L  P P+RM  +  A + G  ++EIHE+  ID WFL Q ++L+  E+ +    +
Sbjct: 417  AEIRRELANPGPERMLFVADAFRAGFTLEEIHEICAIDPWFLAQIEDLVKEEKAVSDGIL 476

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
            S++       +KR+GFSDK+IA      EKEVRE R +L + P YKRVDTCAAEF   T 
Sbjct: 477  SDLDFAALRRLKRKGFSDKRIAQLLGVKEKEVREHRYALKLHPVYKRVDTCAAEFATETA 536

Query: 627  YMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSN 686
            Y+YS+Y+ ECE+ P+ +KKV+ILGGGPNRIGQGIEFDYCC H + +L+ +G+ETIM+N N
Sbjct: 537  YLYSTYEEECEARPSDRKKVMILGGGPNRIGQGIEFDYCCVHAALALRESGFETIMVNCN 596

Query: 687  PETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHR 746
            PETVSTD+DTSDRLYFEPLT+EDVL ++  E P G+IV +GGQTPLKL+           
Sbjct: 597  PETVSTDFDTSDRLYFEPLTLEDVLEIVRTENPWGVIVHYGGQTPLKLA----------- 645

Query: 747  LPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEIG 806
              +A  +  V I GTS DSIDAAEDRERF  ++ +L + QP   IA +E +AL  A+EIG
Sbjct: 646  --NALVENGVNIIGTSADSIDAAEDRERFQKVLNDLGLRQPPNRIAHNEEEALVRAEEIG 703

Query: 807  YPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALAD 866
            YP+VVRPSYVLGGRAM+IV++ E L  Y+  AV+V  + PVL+D +L++AIE+DVD ++D
Sbjct: 704  YPLVVRPSYVLGGRAMQIVHSAEALQKYMREAVQVSEDSPVLLDFFLNNAIEVDVDCVSD 763

Query: 867  SCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNC 926
             C +VVIGGIM+H+EQAG+HSGDS C +P  ++S    D I   T  +A  L V GLMN 
Sbjct: 764  -CKDVVIGGIMQHVEQAGIHSGDSGCSLPPYSLSEEIQDEIRRQTKAMAYALGVVGLMNV 822

Query: 927  QYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPKH 986
            Q+A+   G V++LE NPRASRTVPFVSKA G PLAK  A  M+G SL + G  KEV+P  
Sbjct: 823  QFAV-QDGVVFVLEVNPRASRTVPFVSKATGVPLAKVGARCMAGISLKEQGVEKEVVPDF 881

Query: 987  VSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVFL 1046
             +VKEAV PF KF G D +LGPEMRSTGEVMG+  SF  A+ KAQ+ AG++L  +G +FL
Sbjct: 882  YAVKEAVFPFIKFPGVDTILGPEMRSTGEVMGVGASFGEAYYKAQLGAGERLSPTGKIFL 941

Query: 1047 SLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVAN 1106
            S+ +  K  + + AK F  +G+ I +T GTA +L   G+ V+ + K+ EGRPH GD + N
Sbjct: 942  SVREEDKERVIKTAKNFQALGYGICATRGTAQYLTEHGLIVQTINKVPEGRPHIGDALKN 1001

Query: 1107 GQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRS 1156
            G+I ++V T S D     D   +R+  L  +VP  TT +G  A +E  +S
Sbjct: 1002 GEIALVVNTVSSDPQSVSDSHIIRQSALQQRVPQYTTTAGGEAMSEGAKS 1051


>gi|421541153|ref|ZP_15987283.1| carbamoyl-phosphate synthase large chain [Neisseria meningitidis
            93004]
 gi|402315946|gb|EJU51500.1| carbamoyl-phosphate synthase large chain [Neisseria meningitidis
            93004]
          Length = 1071

 Score = 1253 bits (3243), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 624/1070 (58%), Positives = 795/1070 (74%), Gaps = 22/1070 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTDL+ ILI+GAGPIVIGQACEFDYSG QACKAL+EEGY+VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDLKSILIIGAGPIVIGQACEFDYSGAQACKALREEGYKVILVNSNPATIMTDPEMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  + VE+++ KERPDA+LPTMGGQTALN A+ LA +G L KY VELIGA  DA
Sbjct: 63   VTYIEPIMWQTVEKIIAKERPDAILPTMGGQTALNCALDLARNGVLAKYNVELIGATEDA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  FK+AM+ IG+  P S + +T++E ++   ++G FP +IRP+FT+GG+GGGI
Sbjct: 123  IDKAEDRGRFKEAMEKIGLSCPKSFVCHTMNEALAAQEQVG-FPTLIRPSFTMGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYNK+EF AIC+ G  AS T ++L+E+S+LGWKEYE+EV+RD  DN +IICSIEN DPMG
Sbjct: 182  AYNKDEFLAICERGFDASPTHELLIEQSVLGWKEYEMEVVRDKNDNCIIICSIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGV+ GGSNVQFAVNP +GE++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQIMRNASLAVLREIGVDTGGSNVQFAVNPENGEMIVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VG++LD++ NDIT  KTPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGFTLDELRNDITGGKTPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            FAFEKFP ++  LTTQMKSVGE MA+GRT QESFQKALR LE G  G+   +      D 
Sbjct: 362  FAFEKFPAADDRLTTQMKSVGEVMAMGRTIQESFQKALRGLETGLCGFNPRS-----SDK 416

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
             +++  L  P P+RM  +  A + G  ++EIHE+  ID WFL Q ++L+  E+ +    +
Sbjct: 417  AEIRRELANPGPERMLFVADAFRAGFTLEEIHEICAIDPWFLAQIEDLMKEEKAVSDGVL 476

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
            S++       +KR+GFSDK++A     +EKEVRE R +L + P YKRVDTCAAEF   T 
Sbjct: 477  SDLDYAALRRLKRKGFSDKRLAQLLNVSEKEVREHRYALKLHPVYKRVDTCAAEFATETA 536

Query: 627  YMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSN 686
            Y+YS+Y+ ECES P+ +KKV+ILGGGPNRIGQGIEFDYCC H + +L+ +G+ETIM+N N
Sbjct: 537  YLYSTYEEECESRPSDRKKVMILGGGPNRIGQGIEFDYCCVHAALALRESGFETIMVNCN 596

Query: 687  PETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHR 746
            PETVSTD+DTSDRLYFEPLT+EDVL ++  E P G+IV +GGQTPLKL+           
Sbjct: 597  PETVSTDFDTSDRLYFEPLTLEDVLEIVRTENPWGVIVHYGGQTPLKLA----------- 645

Query: 747  LPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEIG 806
              +A  +  V I GTS DSIDAAEDRERF  ++ +L + QP   IA +E +AL  A+EIG
Sbjct: 646  --NALVENGVNIIGTSADSIDAAEDRERFQKVLNDLGLRQPPNRIAHNEEEALVKAEEIG 703

Query: 807  YPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALAD 866
            YP+VVRPSYVLGGRAM+IV++ E L  Y+  AV+V  + PVL+D +L++AIE+DVD ++D
Sbjct: 704  YPLVVRPSYVLGGRAMQIVHSAEQLQKYMREAVQVSEDSPVLLDFFLNNAIEVDVDCVSD 763

Query: 867  SCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNC 926
               +VVIGGIM+H+EQAG+HSGDS C +P  ++S    D I   T  +A  L V GLMN 
Sbjct: 764  G-KDVVIGGIMQHVEQAGIHSGDSGCSLPPYSLSEEIQDEIRRQTKAMAYALGVVGLMNV 822

Query: 927  QYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPKH 986
            Q+A+   G V++LE NPRASRTVPFVSKA G PLAK  A  M+G SL + G  KEV+P  
Sbjct: 823  QFAV-QDGVVFVLEVNPRASRTVPFVSKATGVPLAKVGARCMAGISLKEQGVEKEVVPDF 881

Query: 987  VSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVFL 1046
             +VKEAV PF KF G D +LGPEMRSTGEVMG+  SF  A+ KAQ+ AG++L  +G +FL
Sbjct: 882  YAVKEAVFPFIKFPGVDTILGPEMRSTGEVMGVGASFGEAYYKAQLGAGERLSPTGKIFL 941

Query: 1047 SLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVAN 1106
            S+ +  K  + + AK F  +G+ I +T GTA +L   G+ V+ + K+ EGRPH GD + N
Sbjct: 942  SVREEDKERVIKTAKNFQALGYGICATRGTAQYLTEHGLIVQTINKVPEGRPHIGDALKN 1001

Query: 1107 GQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRS 1156
            G+I ++V T S D     D   +R+  L  +VP  TT +G  A +E  +S
Sbjct: 1002 GEIALVVNTVSSDPQSVSDSHIIRQSALQQRVPQYTTTAGGEAMSEGAKS 1051


>gi|395498835|ref|ZP_10430414.1| carbamoyl phosphate synthase large subunit [Pseudomonas sp. PAMC
            25886]
          Length = 1073

 Score = 1253 bits (3243), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 626/1088 (57%), Positives = 802/1088 (73%), Gaps = 28/1088 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILILGAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPDMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  + V +++EKERPDALLPTMGGQTALN A+ L   G LEK+GVE+IGA  D 
Sbjct: 63   ATYIEPIKWQTVAKIIEKERPDALLPTMGGQTALNCALDLEREGVLEKFGVEMIGANADT 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  F +AMK+IG+  P SGI ++++E  ++   +G FP IIRP+FT+GGTGGGI
Sbjct: 123  IDKAEDRSRFDKAMKSIGLDCPRSGIAHSMEEANAVLERLG-FPCIIRPSFTMGGTGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEFE IC  GL  S T ++L+++SL+GWKEYE+EV+RD  DN +I+CSIEN DPMG
Sbjct: 182  AYNREEFEEICARGLDLSPTKELLIDESLIGWKEYEMEVVRDKKDNCIIVCSIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGVE GGSNVQF + P  G ++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQIMRNASLAVLREIGVETGGSNVQFGICPDTGRMVVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIA++AAKL++GY+LD++ N+IT   TPASFEPSIDYVVTK+PR
Sbjct: 302  PRVSRSSALASKATGFPIARIAAKLAIGYTLDELQNEITGGATPASFEPSIDYVVTKLPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            FAFEKFP ++  LTTQMKSVGE MA+GRTFQES QKALR LE G  G      ++LD   
Sbjct: 362  FAFEKFPKADARLTTQMKSVGEVMAIGRTFQESLQKALRGLEVGVCGLD----EKLDLSN 417

Query: 507  EQ----LKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLL 562
             +    LK  L VP  +R+  +  A + GM V++I  ++ ID WFL Q ++LI  E+ + 
Sbjct: 418  PESMSVLKRELTVPGAERIWYVADAFRAGMTVEDIFGMNMIDPWFLVQIEDLIKEEEKVK 477

Query: 563  TQSVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFE 622
            T  +S++ +D  + +KR+GFSD ++A     TEK +R  R  L + P YKRVDTCAAEF 
Sbjct: 478  TLGLSSIDRDLMFRLKRKGFSDMRLAKLLGVTEKNLRTHRHKLDIFPVYKRVDTCAAEFA 537

Query: 623  ANTPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIM 682
             +T YMYS+Y+ ECE+AP+ + K++ILGGGPNRIGQGIEFDYCC H + +L+  GYETIM
Sbjct: 538  TDTAYMYSTYEEECEAAPSGRDKIMILGGGPNRIGQGIEFDYCCVHAALALREDGYETIM 597

Query: 683  MNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYL 742
            +N NPETVSTDYDTSDRLYFEP+T+EDVL +  +E+P+G+IVQ+GGQTPLKL+       
Sbjct: 598  VNCNPETVSTDYDTSDRLYFEPVTLEDVLEICRVEKPKGVIVQYGGQTPLKLA------- 650

Query: 743  DEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIA 802
               R   A+G   V I GTSPD+ID AEDRERF  +++ L++ QP     +SE +A+  A
Sbjct: 651  ---RALEAAG---VPIIGTSPDAIDRAEDRERFQQMVERLNLRQPPNATVRSEDEAIRAA 704

Query: 803  KEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVD 862
             +IGYP+VVRPSYVLGGRAMEIVY +E L  YL +AV+V  + PVL+D +L+ AIE+DVD
Sbjct: 705  SKIGYPLVVRPSYVLGGRAMEIVYEEEELKRYLRDAVKVSNDSPVLLDHFLNCAIEMDVD 764

Query: 863  ALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCG 922
            A+ D   +VVIG IM+HIEQAGVHSGDSAC +P  ++ +   D +     K+A  L V G
Sbjct: 765  AVCDGT-DVVIGAIMQHIEQAGVHSGDSACSLPPYSLPAHIQDEMREQVKKMALELGVVG 823

Query: 923  LMNCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEV 982
            LMN Q A+    D+Y++E NPRASRTVPFVSK IG  LA  AA VM+GK+L ++GFTKE+
Sbjct: 824  LMNVQLALQGE-DIYVIEVNPRASRTVPFVSKCIGVSLAMIAARVMAGKTLKEIGFTKEI 882

Query: 983  IPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSG 1042
            IP   SVKEAV PF KF G D +LGPEM+STGEVMG+  +F  AFAKAQ+ A + LP  G
Sbjct: 883  IPNFYSVKEAVFPFAKFPGVDPILGPEMKSTGEVMGVGDTFGEAFAKAQMGASEVLPTGG 942

Query: 1043 TVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGD 1102
            T F+S+ D  KP +  +A+  +++GF++V+T+GTA  +E  G+ V RV K+ EGRPH  D
Sbjct: 943  TAFISVRDDDKPLVAGVARDLINLGFEVVATAGTAKLIEAAGLKVRRVNKVTEGRPHVVD 1002

Query: 1103 MVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTV 1162
            M+ N ++ +++ T+ G      D   +RR  L +K+   TT++   A  EA++     TV
Sbjct: 1003 MIKNDEVTLIINTTEGRQ-SIADSYSIRRNALQHKIYCTTTIAAGEAICEALKFGPEKTV 1061

Query: 1163 TMTALQDF 1170
                LQD 
Sbjct: 1062 RR--LQDL 1067


>gi|74317146|ref|YP_314886.1| carbamoyl-phosphate synthase large subunit [Thiobacillus
            denitrificans ATCC 25259]
 gi|74056641|gb|AAZ97081.1| Carbamoyl-phosphate synthase, large subunit, glutamine-dependent
            [Thiobacillus denitrificans ATCC 25259]
          Length = 1068

 Score = 1253 bits (3242), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 626/1064 (58%), Positives = 794/1064 (74%), Gaps = 26/1064 (2%)

Query: 89   RTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLADR 148
            RTDL+ ILI+GAGPIVIGQACEFDYSG QACKAL+EEGY+VIL+NSNPATIMTDP +AD 
Sbjct: 4    RTDLQSILIIGAGPIVIGQACEFDYSGAQACKALREEGYKVILVNSNPATIMTDPDMADV 63

Query: 149  TYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDAI 208
            TYI P++ ++VE+++ KERPDALLPTMGGQTALN A+ LA+ G LEKYGVE+IGA  DAI
Sbjct: 64   TYIEPISWQIVEKIIAKERPDALLPTMGGQTALNCALDLAKHGVLEKYGVEMIGASKDAI 123

Query: 209  KKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGIA 268
             KAEDR+ FK AM  +G+ +  S I ++++E + +   +G FP IIRP+FT+GG+GGGIA
Sbjct: 124  DKAEDREKFKAAMTKLGLGSARSAIAHSMEEALQVQAALG-FPTIIRPSFTMGGSGGGIA 182

Query: 269  YNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMGV 328
            YNK+EF AIC+ GL AS T ++L+E+SLLGWKEYE+EV+RD  DN +I+CSIEN DPMGV
Sbjct: 183  YNKDEFVAICERGLEASPTHELLIEESLLGWKEYEMEVVRDSKDNCIIVCSIENFDPMGV 242

Query: 329  HTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMNP 388
            HTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGV+ GGSNVQFA+NP DG ++VIEMNP
Sbjct: 243  HTGDSITVAPAQTLTDKEYQIMRNASLAVLREIGVDTGGSNVQFAINPDDGRMVVIEMNP 302

Query: 389  RVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPRF 447
            RVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT   TPASFEPSIDYVVTK+PRF
Sbjct: 303  RVSRSSALASKATGFPIAKVAAKLAVGYTLDELQNDITGGATPASFEPSIDYVVTKVPRF 362

Query: 448  AFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDWE 507
            AFEKFP ++  LTTQMKSVGE MA+GRTFQES QKALR LE G  G           D E
Sbjct: 363  AFEKFPQADDRLTTQMKSVGEVMAMGRTFQESLQKALRGLEVGADGLDPKTT-----DRE 417

Query: 508  QLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSVS 567
            +++  L  P P+R+  +  A + GM +DE+H +S ID WFL Q + LI++E  L  +++ 
Sbjct: 418  EIEAELMSPGPERIWYVGDAFRVGMTLDEVHAVSKIDPWFLDQIEVLIELEASLAGRALV 477

Query: 568  NMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTPY 627
            ++ +D+  ++KR GFSD+++A    + +  VR +R  L + P YKRVDTCAAEF   T Y
Sbjct: 478  DLGRDELRDLKRAGFSDRRLAKLLNTDQHAVRARRNELALHPVYKRVDTCAAEFATQTAY 537

Query: 628  MYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSNP 687
            MYS+Y+ ECE+ P+ KKK+++LGGGPNRIGQGIEFDYCC H + +L+  G+ETIM+N NP
Sbjct: 538  MYSTYEEECEAHPSDKKKIMVLGGGPNRIGQGIEFDYCCVHAALALRENGFETIMVNCNP 597

Query: 688  ETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHRL 747
            ETVSTDYDTSDRLYFEPLT+EDVL ++ +E+P G+IVQ+GGQTPLKL+    + L+ + +
Sbjct: 598  ETVSTDYDTSDRLYFEPLTLEDVLEIVRIEKPFGVIVQYGGQTPLKLA----RDLERNGV 653

Query: 748  PSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEIGY 807
            P         I GTSPD IDAAEDRERF  ++ +L ++QP    A+    AL +A EIGY
Sbjct: 654  P---------IIGTSPDMIDAAEDRERFQQMLHDLGLKQPPNRTARDPESALRMAAEIGY 704

Query: 808  PVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALADS 867
            P+VVRPSYVLGGRAMEIV  +  LV Y+  AV+V  + PVL+D++L+DAIE+DVDAL+D 
Sbjct: 705  PLVVRPSYVLGGRAMEIVREEADLVRYMTEAVKVSNKSPVLLDRFLNDAIEVDVDALSDG 764

Query: 868  CGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNCQ 927
               VVIGGIM+HIEQAGVHSGDSAC +P  +++ +  D +   T+ +AK L V GLMN Q
Sbjct: 765  -EQVVIGGIMQHIEQAGVHSGDSACSLPPYSLADALQDELRRQTVAMAKALKVVGLMNVQ 823

Query: 928  YAITTSGD-VYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPKH 986
            +AI   GD VY+LE NPRASRTVP+VSKAIG PLAK AA  M+G SL    F KEVIP +
Sbjct: 824  FAI--QGDTVYVLEVNPRASRTVPYVSKAIGAPLAKIAARAMAGISLKSQAFEKEVIPPY 881

Query: 987  VSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPL-SGTVF 1045
             SVKEAV PF KF G D +LGPEM+STGEVMG+  +F  AF K+Q+A+  +LP   G  F
Sbjct: 882  FSVKEAVFPFRKFPGVDTILGPEMKSTGEVMGVGDNFGEAFVKSQLASSSELPKPGGRAF 941

Query: 1046 LSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVA 1105
            +S+       +  +A+   D+GF +V+T GTA  +E  GI V  V K+ EGRPH  DM+ 
Sbjct: 942  ISVRSGDHSAVVDLAQGLRDLGFSLVATRGTAQVIEAAGIPVAIVNKVKEGRPHIVDMIK 1001

Query: 1106 NGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALA 1149
            NG I  +V     D     D   +R   L+ +V   TT++GA A
Sbjct: 1002 NGDIDFIVNVVE-DKKAVKDSYAIRAEALSRRVVYFTTLAGARA 1044


>gi|255068592|ref|ZP_05320447.1| carbamoyl-phosphate synthase, large subunit [Neisseria sicca ATCC
            29256]
 gi|255047150|gb|EET42614.1| carbamoyl-phosphate synthase, large subunit [Neisseria sicca ATCC
            29256]
          Length = 1071

 Score = 1253 bits (3242), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 621/1070 (58%), Positives = 795/1070 (74%), Gaps = 22/1070 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTDL+ ILI+GAGPIVIGQACEFDYSG QACKAL+EEGY+VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDLKSILIIGAGPIVIGQACEFDYSGAQACKALREEGYKVILVNSNPATIMTDPEMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  + +E+++ KERPDA+LPTMGGQTALN A+ LA +G L KY VELIGA  DA
Sbjct: 63   VTYIEPIMWQTMEKIIAKERPDAILPTMGGQTALNCALDLARNGVLAKYNVELIGATEDA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  FK+AM+ IG+  P S + +T++E ++   ++G FP +IRP+FT+GG+GGGI
Sbjct: 123  IDKAEDRGRFKEAMEKIGLSCPKSFVCHTMNEALAAQEQVG-FPTLIRPSFTMGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYNK+EF AIC+ G  AS T ++L+E+S+LGWKEYE+EV+RD  DN +IICSIEN DPMG
Sbjct: 182  AYNKDEFLAICERGFDASPTHELLIEQSVLGWKEYEMEVVRDKNDNCIIICSIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGV+ GGSNVQFAVNP +GE++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQIMRNASLAVLREIGVDTGGSNVQFAVNPENGEMIVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VG++LD++ NDIT  +TPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGFTLDELRNDITGGRTPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            FAFEKFP ++  LTTQMKSVGE MA+GRT QESFQKALR LE G  G+   +      D 
Sbjct: 362  FAFEKFPAADDRLTTQMKSVGEVMAMGRTIQESFQKALRGLETGLCGFNPRS-----EDK 416

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
             +++  L  P P+RM  +  A + G  ++EIHE+  ID WFL Q ++L+  EQ +    +
Sbjct: 417  AEIRRELANPGPERMLFVADAFRAGFTLEEIHEICAIDPWFLAQIEDLVKEEQQVSAGCL 476

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
             ++       +KR+GFSDK+IA      EKEVRE R +L + P YKRVDTCAAEF   T 
Sbjct: 477  KDLDFAALRRLKRKGFSDKRIAQLLGVKEKEVREHRYALKLHPVYKRVDTCAAEFATETA 536

Query: 627  YMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSN 686
            Y+YS+Y+ ECE+ P+ +KKV+ILGGGPNRIGQGIEFDYCC H + +L+ +G+ETIM+N N
Sbjct: 537  YLYSTYEEECEAHPSDRKKVMILGGGPNRIGQGIEFDYCCVHAALALRESGFETIMVNCN 596

Query: 687  PETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHR 746
            PETVSTD+DTSDRLYFEPLT+EDVL ++  E P G+IV +GGQTPLKL+           
Sbjct: 597  PETVSTDFDTSDRLYFEPLTLEDVLEIVRTENPWGVIVHYGGQTPLKLA----------- 645

Query: 747  LPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEIG 806
              +A  +  V I GTS DSIDAAEDRERF  ++ +L + QP   IA +E +AL  A+EIG
Sbjct: 646  --NALVENGVNIIGTSADSIDAAEDRERFQKVLNDLGLRQPPNRIAHNEEEALVKAEEIG 703

Query: 807  YPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALAD 866
            YP+VVRPSYVLGGRAM++V++ E L  Y+  AV+V  + PVL+D +L++AIE+DVD ++D
Sbjct: 704  YPLVVRPSYVLGGRAMQVVHSAEELQKYMREAVQVSEDSPVLLDFFLNNAIEVDVDCVSD 763

Query: 867  SCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNC 926
               +VVIGGIM+H+EQAG+HSGDS C +P  ++S    D I   T  +A  L V GLMN 
Sbjct: 764  G-KDVVIGGIMQHVEQAGIHSGDSGCSLPPYSLSEEIQDEIRRQTKAMAYALGVVGLMNV 822

Query: 927  QYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPKH 986
            Q+A+   G V++LE NPRASRTVPFVSKA G PLAK  A  M+G SL + G  KEV+P  
Sbjct: 823  QFAV-QDGVVFVLEVNPRASRTVPFVSKATGVPLAKVGARCMAGISLQEQGVEKEVVPDF 881

Query: 987  VSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVFL 1046
             +VKEAV PF KF G D +LGPEMRSTGEVMG+  SF  A+ KAQ+ AG++L  +G +FL
Sbjct: 882  YAVKEAVFPFIKFPGVDTILGPEMRSTGEVMGVGASFGEAYYKAQLGAGERLNPTGKIFL 941

Query: 1047 SLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVAN 1106
            ++ D  KP + + A+ F  +G+ + +T GTA +L+  GI V+ V K+ EGRPH  D + N
Sbjct: 942  AVRDEDKPLIVKTAQNFQALGYGVCATRGTAEYLKEHGIIVQAVNKVQEGRPHIVDAIKN 1001

Query: 1107 GQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRS 1156
            G+I ++V T S  +    D   +RR  L  +VP  TT++G  A +E  +S
Sbjct: 1002 GEIALVVNTVSSSAQSIADSHSIRRTSLTQRVPQYTTIAGGEAMSEGAKS 1051


>gi|253997072|ref|YP_003049136.1| carbamoyl-phosphate synthase large subunit [Methylotenera mobilis
            JLW8]
 gi|253983751|gb|ACT48609.1| carbamoyl-phosphate synthase, large subunit [Methylotenera mobilis
            JLW8]
          Length = 1067

 Score = 1253 bits (3242), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 624/1065 (58%), Positives = 794/1065 (74%), Gaps = 23/1065 (2%)

Query: 86   LGKRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGL 145
            + KRTD++ ILI+GAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +
Sbjct: 1    MAKRTDIKSILIIGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEM 60

Query: 146  ADRTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKL 205
            AD TYI P+T ++VE+++EKERPDALLPTMGGQTALN A+ L + G L K+ VELIGA  
Sbjct: 61   ADATYIEPVTWQVVEKIIEKERPDALLPTMGGQTALNCALDLDKHGVLAKFNVELIGASK 120

Query: 206  DAIKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGG 265
            +AI KAEDR  FK+AM  IG+ +  S I ++++E + +   IG +P IIRP+FT+GG+GG
Sbjct: 121  EAIDKAEDRQKFKEAMTKIGLGSARSAIAHSMEEALQVQASIG-YPAIIRPSFTMGGSGG 179

Query: 266  GIAYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDP 325
            GIAYN+EEF  IC+ GL AS T+++L+E+SLLGWKEYE+EV+RD ADN +IICSIEN+DP
Sbjct: 180  GIAYNREEFITICERGLDASPTNELLIEESLLGWKEYEMEVVRDSADNCIIICSIENLDP 239

Query: 326  MGVHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIE 385
            MGVHTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGV+ GGSNVQFA+NP DG ++VIE
Sbjct: 240  MGVHTGDSITVAPAQTLTDKEYQIMRNASLAVLREIGVDTGGSNVQFAINPDDGRMIVIE 299

Query: 386  MNPRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITK-KTPASFEPSIDYVVTKI 444
            MNPRVSRSSALASKATGFPIAK+AAKL+VG++LD + N+IT   TPASFEPSIDYVVTKI
Sbjct: 300  MNPRVSRSSALASKATGFPIAKVAAKLAVGFTLDDLRNEITGGATPASFEPSIDYVVTKI 359

Query: 445  PRFAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDW 504
            PRFAFEKFP ++  LTTQMKSVGE MA+GRTFQESFQKALR LE G  G     + E   
Sbjct: 360  PRFAFEKFPQADSRLTTQMKSVGEVMAMGRTFQESFQKALRGLEVGVDG-----LDEKTT 414

Query: 505  DWEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQ 564
            D + +   + VP P+R+  +  A + G+ VDE+  +S ID WFL Q K++ID EQ L  +
Sbjct: 415  DLDTITKEMGVPGPERIWYVGDAFRMGLSVDEVFNISKIDPWFLVQIKDIIDREQALKGK 474

Query: 565  SVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEAN 624
             ++++ K    ++KRRGFSD+++A    + +  VR  R +L V P YKRVDTCAAEF  N
Sbjct: 475  HIADLDKAALLQLKRRGFSDRRLAKLLDTDQHAVRAYRQALSVRPVYKRVDTCAAEFATN 534

Query: 625  TPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMN 684
            T YMYS+Y+ ECES PT KKK+++LGGGPNRIGQGIEFDYCC H +F+++  GYETIM+N
Sbjct: 535  TAYMYSTYEEECESKPTDKKKIMVLGGGPNRIGQGIEFDYCCVHAAFAMREDGYETIMVN 594

Query: 685  SNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDE 744
             NPETVSTDYDTSDRLYFEP+T+EDVL ++ LE+P G+IVQ+GGQTPLKL+    + L++
Sbjct: 595  CNPETVSTDYDTSDRLYFEPVTLEDVLEIVALEKPVGVIVQYGGQTPLKLA----RDLEK 650

Query: 745  HRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKE 804
              +P         I GT+PD+ID AEDRERF  +++EL ++QP    A++  +A+ +A E
Sbjct: 651  AGVP---------IIGTTPDAIDMAEDRERFQKMLQELGLKQPPNRTARTPDEAIRLATE 701

Query: 805  IGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDAL 864
            IGYP+VVRPSYVLGGRAMEIV     L  Y+  AV+V  E PVL+D++L+DA+E+DVDAL
Sbjct: 702  IGYPLVVRPSYVLGGRAMEIVQEQSQLERYMREAVKVSNESPVLLDRFLNDALEVDVDAL 761

Query: 865  ADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLM 924
            +D    V+IGGIMEH+EQAGVHSGDSAC +P  ++S++  D +   T ++AK L V GLM
Sbjct: 762  SDG-EEVIIGGIMEHVEQAGVHSGDSACSLPPYSLSAALQDELRVQTKQMAKALGVVGLM 820

Query: 925  NCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIP 984
            N Q+AI     VY+LE NPRASRTVPFVSKA G  LAK AA  M+G++L     T+E+IP
Sbjct: 821  NVQFAIQGE-TVYVLEVNPRASRTVPFVSKACGLQLAKVAARCMAGQTLASQNVTREIIP 879

Query: 985  KHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTV 1044
               SVKEAV PF KF G D +LGPEM+STGEVMG+  +F  AF K+Q+ A  KLP  G  
Sbjct: 880  PFYSVKEAVFPFIKFPGVDTILGPEMKSTGEVMGVGATFAEAFLKSQLGASTKLPEGGRA 939

Query: 1045 FLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMV 1104
            F+S+       +  I +    +GF++V+T GTA  L   G+ V+ V K+ EGRPH  DM+
Sbjct: 940  FISVRKEDYLKVVEIGQQLHQLGFELVATKGTAAALAEHGLKVQAVNKVAEGRPHIVDMI 999

Query: 1105 ANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALA 1149
             N  I  +V  +  D     D  ++RR  L  KV   TT++GA A
Sbjct: 1000 KNDDISFIVNVTE-DKRAVADSYEIRRSALQNKVTYYTTIAGAKA 1043


>gi|416018567|ref|ZP_11565495.1| carbamoyl phosphate synthase large subunit [Pseudomonas syringae pv.
            glycinea str. B076]
 gi|320322539|gb|EFW78632.1| carbamoyl phosphate synthase large subunit [Pseudomonas syringae pv.
            glycinea str. B076]
          Length = 1073

 Score = 1253 bits (3242), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 627/1088 (57%), Positives = 800/1088 (73%), Gaps = 28/1088 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILILGAGPIVIGQACEFDYSG QAC+AL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIKSILILGAGPIVIGQACEFDYSGAQACRALREEGYRVILVNSNPATIMTDPAMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  + V +++EKERPDALLPTMGGQTALN A+ L   G LEK+GVE+IGA  D 
Sbjct: 63   ATYIEPIKWQTVAKIIEKERPDALLPTMGGQTALNCALDLEREGVLEKFGVEMIGANADT 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  F +AMK+IG+  P SGI ++++E  ++  ++G FP IIRP+FT+GGTGGGI
Sbjct: 123  IDKAEDRSRFDKAMKSIGLACPRSGIAHSMEEANAVLEKLG-FPCIIRPSFTMGGTGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEFE IC  GL  S T ++L+++SL+GWKEYE+EV+RD  DN +I+CSIEN DPMG
Sbjct: 182  AYNREEFEEICARGLDLSPTKELLIDESLIGWKEYEMEVVRDKKDNCIIVCSIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ LR+ S+A++REIGVE GGSNVQF + P  G ++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQILRNASLAVLREIGVETGGSNVQFGICPDTGRMVVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIA++AAKL+VGY+LD++ N+IT  KTPASFEPSIDYVVTK+PR
Sbjct: 302  PRVSRSSALASKATGFPIARVAAKLAVGYTLDELSNEITGGKTPASFEPSIDYVVTKLPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            FAFEKF  ++  LTTQMKSVGE MA+GRTFQES QKALR LE G  G       +LD   
Sbjct: 362  FAFEKFAKADARLTTQMKSVGEVMAIGRTFQESLQKALRGLEVGVCGLD----PKLDLSH 417

Query: 507  EQ----LKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLL 562
             +    LK  L VP  +R+  +  A + GM V+EI  ++ ID WFL Q ++L+  E+ + 
Sbjct: 418  PESMSTLKRELTVPGAERIWYVADAFRAGMTVEEIFAMNMIDPWFLVQIEDLVKDEEKVK 477

Query: 563  TQSVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFE 622
            T  +S + +D  + +KR+GFSD ++A     TEK +R  R  L V P YKRVDTCAAEF 
Sbjct: 478  TLGLSAIDRDLMFRLKRKGFSDARLAKLVGVTEKNLRTHRHKLDVFPVYKRVDTCAAEFA 537

Query: 623  ANTPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIM 682
             +T Y+YS+Y+ ECE+ P+ + K++ILGGGPNRIGQGIEFDYCC H + +L+  GYETIM
Sbjct: 538  TDTAYLYSTYEEECEANPSARDKIMILGGGPNRIGQGIEFDYCCVHAALALREDGYETIM 597

Query: 683  MNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYL 742
            +N NPETVSTDYDTSDRLYFEP+T+EDVL ++ +E+P+G+IVQ+GGQTPLKL+       
Sbjct: 598  VNCNPETVSTDYDTSDRLYFEPVTLEDVLEIVRVEKPKGVIVQYGGQTPLKLA------- 650

Query: 743  DEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIA 802
               R   A+G   V I GTSPD+ID AEDRERF  +++ L++ QP     +SE +A+  A
Sbjct: 651  ---RALEAAG---VPIIGTSPDAIDRAEDRERFQQMVERLNLRQPPNATVRSEDEAIRAA 704

Query: 803  KEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVD 862
             +IGYP+VVRPSYVLGGRAMEIVY ++ L  YL  AV+V  + PVL+D +L+ AIE+DVD
Sbjct: 705  AKIGYPLVVRPSYVLGGRAMEIVYQEDELKRYLREAVQVSNDSPVLLDHFLNCAIEMDVD 764

Query: 863  ALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCG 922
            A+ D   +VVIG IM+HIEQAGVHSGDSAC +P  ++ +   D +     K+A  L V G
Sbjct: 765  AVCDGT-DVVIGAIMQHIEQAGVHSGDSACSLPPYSLPAHIQDEMREQVKKMALELGVVG 823

Query: 923  LMNCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEV 982
            LMN Q A+    D+Y++E NPRASRTVPFVSK IG  LA  AA VM+GK+L +L FTKE+
Sbjct: 824  LMNVQLALQGE-DIYVIEVNPRASRTVPFVSKCIGVSLAMIAARVMAGKTLKELNFTKEI 882

Query: 983  IPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSG 1042
            IP   SVKEAV PF KF G D +LGPEM+STGEVMG+  +F  AFAKAQ+ A + LP  G
Sbjct: 883  IPNFYSVKEAVFPFAKFPGVDPILGPEMKSTGEVMGVGDTFGEAFAKAQMGASEVLPTGG 942

Query: 1043 TVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGD 1102
            T F+S+ D  KP +E +A+  +++GF+IV+T+GTA  +E  G+ V RV K+ EGRPH  D
Sbjct: 943  TAFISVRDDDKPLVEAVARDLINLGFEIVATAGTAKLIEAAGLKVRRVNKVTEGRPHVVD 1002

Query: 1103 MVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTV 1162
            M+ N ++ +++ T+ G      D   +RR  L +K+   TT++   A  EA++     TV
Sbjct: 1003 MIKNDEVTLIINTTEGRQ-SIADSYSIRRNALQHKIYCTTTIAAGEAICEALKFGPEKTV 1061

Query: 1163 TMTALQDF 1170
                LQD 
Sbjct: 1062 RR--LQDL 1067


>gi|387770482|ref|ZP_10126662.1| carbamoyl-phosphate synthase, large subunit [Pasteurella bettyae CCUG
            2042]
 gi|386904293|gb|EIJ69089.1| carbamoyl-phosphate synthase, large subunit [Pasteurella bettyae CCUG
            2042]
          Length = 1070

 Score = 1253 bits (3242), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 618/1077 (57%), Positives = 802/1077 (74%), Gaps = 23/1077 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KR D+  ILI+GAGPIVIGQACEFDYSG QACKAL+EEGY+V+L+NSNPATIMTD  +AD
Sbjct: 3    KRNDINTILIIGAGPIVIGQACEFDYSGAQACKALREEGYKVVLVNSNPATIMTDQNMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  + VE+++EKERPDA+LPTMGGQTALN A+ L++ G L+KY VELIGA  DA
Sbjct: 63   VTYIEPIQWQTVEKIIEKERPDAILPTMGGQTALNCALDLSKHGVLKKYKVELIGATEDA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  FK+AM  IG+ TP S + ++ +E      E+G FP +IRP+FT+GG+GGGI
Sbjct: 123  IDKAEDRGRFKEAMAKIGLNTPKSFVCHSFEEAWVAQVEVG-FPTLIRPSFTMGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN++EF+AIC+ G  AS T ++L+E+S+LGWKEYE+EV+RD  DN +I+CSIEN DPMG
Sbjct: 182  AYNRDEFQAICERGFEASPTHELLIEQSVLGWKEYEMEVVRDKVDNCIIVCSIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGV+ GGSNVQFA+NP +GE++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQIMRNASLAVLREIGVDTGGSNVQFAINPENGEMIVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKK-TPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+L+++ NDIT    PASFEPSIDYVVTK+PR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGYTLNELRNDITGGLIPASFEPSIDYVVTKVPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            FAFEKFP ++  LTTQMKSVGE MA+GRTFQES QKALR LE G  G+   N+K    D 
Sbjct: 362  FAFEKFPKADDRLTTQMKSVGEVMAMGRTFQESIQKALRGLETGICGF---NLK--TEDM 416

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
            E+L++ +  P P+R+  +  A   G  ++E+H  S ID WFL Q ++L+  E  L  +++
Sbjct: 417  EKLRHEISNPGPERLLYVADAFGIGWSLEEVHHYSKIDPWFLIQIQDLVLEELALEKKTL 476

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
            +++++D+ Y +KR+GFSDK+IA   KS E  VR  R +  + P YKRVDTCA EF+++T 
Sbjct: 477  ADLSRDEIYRLKRKGFSDKRIAQLVKSDETSVRSLRNAFNIHPVYKRVDTCAGEFKSDTA 536

Query: 627  YMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSN 686
            Y+YS+Y+ ECE+ PT +KKV+ILGGGPNRIGQGIEFDYCC H + +L+ +G+ETIM+N N
Sbjct: 537  YLYSTYEEECEANPTNRKKVMILGGGPNRIGQGIEFDYCCVHAALALRESGFETIMVNCN 596

Query: 687  PETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHR 746
            PETVSTD+DTSDRLYFEPLT+EDVL +I +E+P G+IV +GGQTPLKL+  +H       
Sbjct: 597  PETVSTDFDTSDRLYFEPLTLEDVLEIIHVEQPWGVIVHYGGQTPLKLANALH------- 649

Query: 747  LPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEIG 806
               A+G   V + GTS DSIDAAEDRERF  I+ +L ++QP    A++  +A+ +A E+G
Sbjct: 650  ---ANG---VNVIGTSADSIDAAEDRERFQKILNDLQLKQPANRTARNAQEAVGLANEVG 703

Query: 807  YPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALAD 866
            YP+VVRPSYVLGGRAM+IVY DE L  Y+  AV V  + P+L+D +L++AIE+DVD + D
Sbjct: 704  YPLVVRPSYVLGGRAMQIVYNDEELNRYMREAVSVSNDSPILLDHFLNNAIEVDVDCICD 763

Query: 867  SCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNC 926
                V+IGGIM+HIEQAG+HSGDSAC +P  ++S    D I   T  +A  LNV GLMN 
Sbjct: 764  G-EQVIIGGIMQHIEQAGIHSGDSACSLPPYSLSKPIQDEIRRQTAAMAHALNVVGLMNV 822

Query: 927  QYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPK- 985
            Q+A+  +  +Y+LE NPRASRTVPFVSKA   PLAK A  VM+G SL + G   EV+PK 
Sbjct: 823  QFAVQKN-VIYVLEVNPRASRTVPFVSKATSQPLAKIATRVMAGMSLKEQGIQGEVVPKG 881

Query: 986  HVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVF 1045
              +VKEAV PF KF G D +LGPEMRSTGEVMGI  +F  AF KAQI AG+++P +G VF
Sbjct: 882  FFAVKEAVFPFIKFPGVDTILGPEMRSTGEVMGIGKTFAEAFLKAQIGAGERIPRTGKVF 941

Query: 1046 LSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVA 1105
            +S+++  KP L  I K   + G+ + +T GTA FL   GI V+ V K+ EGRPH  D + 
Sbjct: 942  VSVDNDDKPRLLPIVKRLQEQGYGLCATFGTAKFLHEHGITVQTVNKVREGRPHIVDAIK 1001

Query: 1106 NGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTV 1162
            N +I +++ T  G S    D   +R   L   +P+ TT++ A A + ++ +L  + V
Sbjct: 1002 NNEIALIINTVGGISESVADSASIRANALKQGLPIYTTIASADAISLSVANLHMHEV 1058


>gi|424921344|ref|ZP_18344705.1| carbamoyl-phosphate synthase, large subunit [Pseudomonas fluorescens
            R124]
 gi|404302504|gb|EJZ56466.1| carbamoyl-phosphate synthase, large subunit [Pseudomonas fluorescens
            R124]
          Length = 1073

 Score = 1253 bits (3242), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 627/1088 (57%), Positives = 804/1088 (73%), Gaps = 28/1088 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILILGAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPDMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  + V +++EKERPDA+LPTMGGQTALN A+ L   G LEK+GVE+IGA  D 
Sbjct: 63   ATYIEPIKWQTVAKIIEKERPDAVLPTMGGQTALNCALDLEREGVLEKFGVEMIGANADT 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  F +AMK+IG++ P SGI ++++E  ++   +G FP IIRP+FT+GGTGGGI
Sbjct: 123  IDKAEDRSRFDKAMKSIGLECPRSGIAHSMEEANAVLERLG-FPCIIRPSFTMGGTGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEFE IC  GL  S T ++L+++SL+GWKEYE+EV+RD  DN +I+CSIEN DPMG
Sbjct: 182  AYNREEFEEICARGLDLSPTKELLIDESLIGWKEYEMEVVRDKKDNCIIVCSIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ LR+ S+A++REIGVE GGSNVQF + P  G ++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQILRNASLAVLREIGVETGGSNVQFGICPDTGRMVVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT  KTPASFEPSIDYVVTK+PR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGYTLDELSNDITGGKTPASFEPSIDYVVTKLPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            FAFEKF  ++  LTTQMKSVGE MA+GRTFQES QKALR LE G  G      ++LD   
Sbjct: 362  FAFEKFANADARLTTQMKSVGEVMAIGRTFQESLQKALRGLEVGVCGLD----EKLDLSN 417

Query: 507  EQ----LKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLL 562
             +    LK  L VP  +R+  +  A + G+ V++I  ++ ID WFL Q ++LI  E+ + 
Sbjct: 418  PESMSILKRELTVPGAERIWYVADAFRAGLTVEDIFGMNMIDPWFLVQIEDLIKDEEKVK 477

Query: 563  TQSVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFE 622
            T  +S + +D  +++KR+GFSD+++A     TEK +R  R  L V P YKRVDTCAAEF 
Sbjct: 478  TLGLSAIDRDLMFKLKRKGFSDQRLAKLLGVTEKNLRTHRQKLEVFPVYKRVDTCAAEFA 537

Query: 623  ANTPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIM 682
             +T Y+YS+Y+ ECE+AP+ + K++ILGGGPNRIGQGIEFDYCC H + +L+  GYETIM
Sbjct: 538  TDTAYLYSTYEEECEAAPSGRDKIMILGGGPNRIGQGIEFDYCCVHAALALREDGYETIM 597

Query: 683  MNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYL 742
            +N NPETVSTDYDTSDRLYFEP+T+EDVL +  +E+P+G+IVQ+GGQTPLKL+       
Sbjct: 598  VNCNPETVSTDYDTSDRLYFEPVTLEDVLEICRVEKPKGVIVQYGGQTPLKLA------- 650

Query: 743  DEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIA 802
               R   A+G   V I GTSPD+ID AEDRERF  +++ L++ QP     +SE +A+  A
Sbjct: 651  ---RALEAAG---VPIIGTSPDAIDRAEDRERFQQMVERLNLRQPPNATVRSEDEAVRAA 704

Query: 803  KEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVD 862
             +IGYP+VVRPSYVLGGRAMEIVY ++ L  YL +AV+V  + PVL+D +L+ AIE+DVD
Sbjct: 705  AKIGYPLVVRPSYVLGGRAMEIVYKEDELKRYLRDAVQVSNDSPVLLDHFLNCAIEMDVD 764

Query: 863  ALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCG 922
            A+ D   +VVIG IM+HIEQAGVHSGDSAC +P  ++ +   D +     K+A  L V G
Sbjct: 765  AVCDG-KDVVIGAIMQHIEQAGVHSGDSACSLPPYSLPAHIQDEMREQVKKMALELGVVG 823

Query: 923  LMNCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEV 982
            LMN Q A+    D+Y++E NPRASRTVPFVSK IG  LA  AA VM+GK+L ++GFTKE+
Sbjct: 824  LMNVQLALQGE-DIYVIEVNPRASRTVPFVSKCIGVSLAMIAARVMAGKTLKEIGFTKEI 882

Query: 983  IPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSG 1042
            IP   SVKEAV PF KF G D +LGPEM+STGEVMG+  +F  AFAKAQ+ A + LP  G
Sbjct: 883  IPNFYSVKEAVFPFAKFPGVDPILGPEMKSTGEVMGVGDTFGEAFAKAQMGASEVLPTGG 942

Query: 1043 TVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGD 1102
            T F+S+ D  KP +  +A+  +++GF++V+T+GTA  +E  G+ V RV K+ EGRPH  D
Sbjct: 943  TAFISVRDDDKPLVAGVARDLINLGFEVVATAGTAKLIEAAGLKVRRVNKVTEGRPHVVD 1002

Query: 1103 MVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTV 1162
            M+ N ++ +++ T+ G      D   +RR  L +K+   TT++   A  EA++     TV
Sbjct: 1003 MIKNDEVTLIINTTEGRQ-SIADSYSIRRNALQHKIYCTTTIAAGEAICEALKFGPEKTV 1061

Query: 1163 TMTALQDF 1170
                LQD 
Sbjct: 1062 RR--LQDL 1067


>gi|385329102|ref|YP_005883405.1| carbamoyl phosphate synthase large subunit [Neisseria meningitidis
            alpha710]
 gi|308389954|gb|ADO32274.1| carbamoyl phosphate synthase large subunit [Neisseria meningitidis
            alpha710]
          Length = 1071

 Score = 1253 bits (3241), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 624/1070 (58%), Positives = 795/1070 (74%), Gaps = 22/1070 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTDL+ ILI+GAGPIVIGQACEFDYSG QACKAL+EEGY+VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDLKSILIIGAGPIVIGQACEFDYSGAQACKALREEGYKVILVNSNPATIMTDPEMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  + VE+++ KERPDA+LPTMGGQTALN A+ LA +G L KY VELIGA  DA
Sbjct: 63   VTYIEPIMWQTVEKIIAKERPDAILPTMGGQTALNCALDLARNGVLAKYNVELIGATEDA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  FK+AM+ IG+  P S + +T++E ++   ++G FP +IRP+FT+GG+GGGI
Sbjct: 123  IDKAEDRGRFKEAMEKIGLSCPKSFVCHTMNEALAAQEQVG-FPTLIRPSFTMGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYNK+EF AIC+ G  AS T ++L+E+S+LGWKEYE+EV+RD  DN +IICSIEN DPMG
Sbjct: 182  AYNKDEFLAICERGFDASPTHELLIEQSVLGWKEYEMEVVRDKNDNCIIICSIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGV+ GGSNVQFAVNP +GE++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQIMRNASLAVLREIGVDTGGSNVQFAVNPENGEMIVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VG++LD++ NDIT  KTPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGFTLDELRNDITGGKTPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            FAFEKFP ++  LTTQMKSVGE MA+GRT QESFQKALR LE G  G+   +      D 
Sbjct: 362  FAFEKFPAADDRLTTQMKSVGEVMAMGRTIQESFQKALRGLETGLCGFNPRS-----SDK 416

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
             +++  L  P P+RM  +  A + G  ++EIHE+  ID WFL Q ++L+  E+ +    +
Sbjct: 417  AEIRRELANPGPERMLFVADAFRAGFTLEEIHEICAIDPWFLAQIEDLMKEEKAVSDGVL 476

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
            S++       +KR+GFSDK++A     +EKEVRE R +L + P YKRVDTCAAEF   T 
Sbjct: 477  SDLDYAALRRLKRKGFSDKRLAQLLNVSEKEVREHRYALKLHPVYKRVDTCAAEFATETA 536

Query: 627  YMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSN 686
            Y+YS+Y+ ECES P+ +KKV+ILGGGPNRIGQGIEFDYCC H + +L+ +G+ETIM+N N
Sbjct: 537  YLYSTYEEECESRPSDRKKVMILGGGPNRIGQGIEFDYCCVHAALALRESGFETIMVNCN 596

Query: 687  PETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHR 746
            PETVSTD+DTSDRLYFEPLT+EDVL ++  E P G+IV +GGQTPLKL+           
Sbjct: 597  PETVSTDFDTSDRLYFEPLTLEDVLEIVRTENPWGVIVHYGGQTPLKLA----------- 645

Query: 747  LPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEIG 806
              +A  +  V I GTS DSIDAAEDRERF  ++ +L + QP   IA +E +AL  A+EIG
Sbjct: 646  --NALVENGVNIIGTSADSIDAAEDRERFQKVLNDLGLRQPPNRIAHNEEEALVKAEEIG 703

Query: 807  YPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALAD 866
            YP+VVRPSYVLGGRAM+IV++ E L  Y+  AV+V  + PVL+D +L++AIE+DVD ++D
Sbjct: 704  YPLVVRPSYVLGGRAMQIVHSAEQLQKYMREAVQVSEDSPVLLDFFLNNAIEVDVDCVSD 763

Query: 867  SCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNC 926
               +VVIGGIM+H+EQAG+HSGDS C +P  ++S    D I   T  +A  L V GLMN 
Sbjct: 764  G-KDVVIGGIMQHVEQAGIHSGDSGCSLPPYSLSEEIQDEIRRQTKAMAYALGVVGLMNV 822

Query: 927  QYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPKH 986
            Q+A+   G V++LE NPRASRTVPFVSKA G PLAK  A  M+G SL + G  KEV+P  
Sbjct: 823  QFAV-QDGVVFVLEVNPRASRTVPFVSKATGVPLAKVGARCMAGISLKEQGVEKEVVPDF 881

Query: 987  VSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVFL 1046
             +VKEAV PF KF G D +LGPEMRSTGEVMG+  SF  A+ KAQ+ AG++L  +G +FL
Sbjct: 882  YAVKEAVFPFIKFPGVDTILGPEMRSTGEVMGVGASFGEAYYKAQLGAGERLNPTGKIFL 941

Query: 1047 SLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVAN 1106
            S+ +  K  + + AK F  +G+ I +T GTA +L   G+ V+ + K+ EGRPH GD + N
Sbjct: 942  SVREEDKERVIKTAKNFQVLGYGICATRGTAQYLTEHGLIVQTINKVPEGRPHIGDALKN 1001

Query: 1107 GQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRS 1156
            G+I ++V T S D     D   +R+  L  +VP  TT +G  A +E  +S
Sbjct: 1002 GEIALVVNTVSSDPQSVSDSHIIRQSALQQRVPQYTTTAGGEAMSEGAKS 1051


>gi|296313298|ref|ZP_06863239.1| carbamoyl-phosphate synthase, large subunit [Neisseria polysaccharea
            ATCC 43768]
 gi|296840205|gb|EFH24143.1| carbamoyl-phosphate synthase, large subunit [Neisseria polysaccharea
            ATCC 43768]
          Length = 1071

 Score = 1253 bits (3241), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 624/1070 (58%), Positives = 795/1070 (74%), Gaps = 22/1070 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTDL+ ILI+GAGPIVIGQACEFDYSG QACKAL EEGY+VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDLKSILIIGAGPIVIGQACEFDYSGAQACKALHEEGYKVILVNSNPATIMTDPEMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  + VE+++ KERPDA+LPTMGGQTALN A+ LA +G L KY VELIGA  DA
Sbjct: 63   VTYIEPIMWQTVEKIIAKERPDAILPTMGGQTALNCALDLARNGVLAKYNVELIGATEDA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  FK+AM+ IG+  P S + +T++E ++   ++G FP +IRP+FT+GG+GGGI
Sbjct: 123  IDKAEDRGRFKEAMEKIGLSCPKSFVCHTMNEALAAQEQVG-FPTLIRPSFTMGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYNK+EF AIC+ G  AS T ++L+E+S+LGWKEYE+EV+RD  DN +IICSIEN DPMG
Sbjct: 182  AYNKDEFLAICERGFDASPTHELLIEQSVLGWKEYEMEVVRDKNDNCIIICSIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGV+ GGSNVQFAVNP +GE++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQIMRNASLAVLREIGVDTGGSNVQFAVNPENGEMIVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VG++LD++ NDIT  +TPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGFTLDELRNDITGGRTPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            FAFEKFP ++  LTTQMKSVGE MA+GRT QESFQKALR LE G  G+   +      D 
Sbjct: 362  FAFEKFPAADDRLTTQMKSVGEVMAMGRTIQESFQKALRGLETGLCGFNPRS-----SDK 416

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
             +++  L  P P+RM  +  A + G  ++EIHE+  ID WFL Q ++L+  E+ +    +
Sbjct: 417  AEIRRELANPGPERMLFVADAFRAGFTLEEIHEICAIDPWFLAQIEDLVKEEKAVSDGIL 476

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
            S++     + +KR+GFSDK+IA      EKEVRE R +L + P YKRVDTCAAEF   T 
Sbjct: 477  SDLDYAALHRLKRKGFSDKRIAQLLGVKEKEVREHRYALNLHPVYKRVDTCAAEFATETA 536

Query: 627  YMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSN 686
            Y+YS+Y+ ECE+ P+ +KKV+ILGGGPNRIGQGIEFDYCC H + +L+ +G+ETIM+N N
Sbjct: 537  YLYSTYEEECEARPSDRKKVMILGGGPNRIGQGIEFDYCCVHAALALRESGFETIMVNCN 596

Query: 687  PETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHR 746
            PETVSTD+DTSDRLYFEPLT+EDVL ++  E P G+IV +GGQTPLKL+           
Sbjct: 597  PETVSTDFDTSDRLYFEPLTLEDVLEIVRTENPWGVIVHYGGQTPLKLA----------- 645

Query: 747  LPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEIG 806
              +A  +  V I GTS DSIDAAEDRERF  ++ +L + QP   IA +E +AL  A+EIG
Sbjct: 646  --NALVENGVNIIGTSADSIDAAEDRERFQKVLNDLGLRQPPNRIAHNEEEALVKAEEIG 703

Query: 807  YPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALAD 866
            YP+VVRPSYVLGGRAM+IV++ E L  Y+  AV+V  + PVL+D +L++AIE+DVD ++D
Sbjct: 704  YPLVVRPSYVLGGRAMQIVHSAEELQKYMREAVQVSEDSPVLLDFFLNNAIEVDVDCVSD 763

Query: 867  SCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNC 926
            S  +VVIGGIM+H+EQAG+HSGDS C +P  ++S    D I   T  +A  L V GLMN 
Sbjct: 764  S-KDVVIGGIMQHVEQAGIHSGDSGCSLPPYSLSEEIQDEIRRQTKAMAYALGVVGLMNV 822

Query: 927  QYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPKH 986
            Q+A+   G V++LE NPRASRTVPFVSKA G PLAK  A  M+G SL + G  KEV+P  
Sbjct: 823  QFAV-QDGVVFVLEVNPRASRTVPFVSKATGVPLAKVGARCMAGISLKEQGVEKEVVPDF 881

Query: 987  VSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVFL 1046
             +VKEAV PF KF G D +LGPEMRSTGEVMG+  SF  A+ KAQ+ AG++L  +G +FL
Sbjct: 882  YAVKEAVFPFIKFPGVDTILGPEMRSTGEVMGVGASFGEAYYKAQLGAGERLNPTGKIFL 941

Query: 1047 SLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVAN 1106
            S+ +  K  + + AK F  +G+ I +T GTA +L   G+ V+ + K+ EGRPH GD + N
Sbjct: 942  SVREEDKERVIKTAKNFQVLGYGICATRGTAQYLTEHGLIVQTINKVPEGRPHIGDALKN 1001

Query: 1107 GQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRS 1156
            G+I ++V T S D     D   +R+  L  +VP  TT +G  A +E  +S
Sbjct: 1002 GEIALVVNTVSSDPQSVSDSHIIRQSALQQRVPQYTTTAGGEAMSEGAKS 1051


>gi|398938779|ref|ZP_10668081.1| carbamoyl-phosphate synthase, large subunit [Pseudomonas sp.
            GM41(2012)]
 gi|398165251|gb|EJM53371.1| carbamoyl-phosphate synthase, large subunit [Pseudomonas sp.
            GM41(2012)]
          Length = 1073

 Score = 1253 bits (3241), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 623/1088 (57%), Positives = 805/1088 (73%), Gaps = 28/1088 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILILGAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPDMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  + V +++EKERPDALLPTMGGQTALN A+ L   G LEK+GVE+IGA  D 
Sbjct: 63   ATYIEPIKWQTVAKIIEKERPDALLPTMGGQTALNCALDLEREGVLEKFGVEMIGANADT 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  F +AMK+IG+  P SGI ++++E  ++  ++G FP IIRP+FT+GGTGGGI
Sbjct: 123  IDKAEDRSRFDKAMKSIGLDCPRSGIAHSMEEANAVLEKLG-FPCIIRPSFTMGGTGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEFE IC  GL  S T ++L+++SL+GWKEYE+EV+RD  DN +I+CSIEN DPMG
Sbjct: 182  AYNREEFEEICARGLDLSPTKELLIDESLIGWKEYEMEVVRDKKDNCIIVCSIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGVE GGSNVQF + P  G ++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQIMRNASLAVLREIGVETGGSNVQFGICPDTGRMVVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIA++AAKL++GY+LD++ N+IT   TPASFEPSIDYVVTK+PR
Sbjct: 302  PRVSRSSALASKATGFPIARIAAKLAIGYTLDELQNEITGGATPASFEPSIDYVVTKLPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            FAFEKFP ++  LTTQMKSVGE MA+GRTFQES QKALR LE G  G      ++LD   
Sbjct: 362  FAFEKFPKADARLTTQMKSVGEVMAIGRTFQESLQKALRGLEVGVCGLD----EKLDLSN 417

Query: 507  EQ----LKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLL 562
             +    LK  L VP  +R+  +  A + G+ V++I  ++ ID WFL Q ++LI  E+ + 
Sbjct: 418  PESMSVLKRELTVPGAERIWYVADAFRAGLSVEDIFGMNMIDPWFLVQIEDLIKEEEKVK 477

Query: 563  TQSVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFE 622
            T  ++++ +D  + +KR+GFSD ++A     TEK +R  R  L + P YKRVDTCAAEF 
Sbjct: 478  TLGLASIDRDLMFRLKRKGFSDMRLAKLLGVTEKALRRHRHKLEIFPVYKRVDTCAAEFA 537

Query: 623  ANTPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIM 682
             +T Y+YS+Y+ ECE+APT + K++ILGGGPNRIGQGIEFDYCC H + +L++ GYETIM
Sbjct: 538  TDTAYLYSTYEEECEAAPTGRDKIMILGGGPNRIGQGIEFDYCCVHAALALRADGYETIM 597

Query: 683  MNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYL 742
            +N NPETVSTDYDTSDRLYFEP+T+EDVL +  +E+P+G+IVQ+GGQTPLKL+    + L
Sbjct: 598  VNCNPETVSTDYDTSDRLYFEPVTLEDVLEICRVEKPKGVIVQYGGQTPLKLA----RAL 653

Query: 743  DEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIA 802
            +E  +P         I GTSPD+ID AEDRERF  +++ L++ QP     +SE +A+  A
Sbjct: 654  EEAGVP---------IIGTSPDAIDRAEDRERFQQMVERLNLRQPPNATVRSEDEAIRAA 704

Query: 803  KEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVD 862
             +IGYP+VVRPSYVLGGRAMEIVY +E L  YL +AV+V  + PVL+D +L+ AIE+DVD
Sbjct: 705  AKIGYPLVVRPSYVLGGRAMEIVYEEEELKRYLRDAVKVSNDSPVLLDHFLNCAIEMDVD 764

Query: 863  ALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCG 922
            A+ D   +VVIG IM+HIEQAGVHSGDSAC +P  ++ +   D +     K+A  L V G
Sbjct: 765  AVCDGT-DVVIGAIMQHIEQAGVHSGDSACSLPPYSLPAHIQDEMREQVKKMALELGVVG 823

Query: 923  LMNCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEV 982
            LMN Q A+    D+Y++E NPRASRTVPFVSK IG  LA  AA VM+GK+L ++GFTKE+
Sbjct: 824  LMNVQLALQGE-DIYVIEVNPRASRTVPFVSKCIGVSLAMIAARVMAGKTLKEIGFTKEI 882

Query: 983  IPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSG 1042
            IP   SVKEAV PF KF G D +LGPEM+STGEVMG+  +F  AFAKAQ+ A + LP  G
Sbjct: 883  IPNFYSVKEAVFPFAKFPGVDPILGPEMKSTGEVMGVGDTFGEAFAKAQMGASEVLPTGG 942

Query: 1043 TVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGD 1102
            T F+S+ D  KP +  +A+  +++GF++V+T+GTA  +E  G+ V RV K+ EGRPH  D
Sbjct: 943  TAFISVRDDDKPLVAGVARDLINLGFEVVATAGTAKLIEAAGLKVRRVNKVTEGRPHVVD 1002

Query: 1103 MVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTV 1162
            M+ N ++ +++ T+ G      D   +RR  L +K+   TT++   A  EA++     TV
Sbjct: 1003 MIKNDEVTLIINTTEGRQ-SIADSYSIRRNALQHKIYCTTTIAAGEAICEALKFGPEKTV 1061

Query: 1163 TMTALQDF 1170
                LQD 
Sbjct: 1062 RR--LQDL 1067


>gi|34499257|ref|NP_903472.1| carbamoyl-phosphate synthase large chain [Chromobacterium violaceum
            ATCC 12472]
 gi|34105108|gb|AAQ61464.1| carbamoyl-phosphate synthase large chain [Chromobacterium violaceum
            ATCC 12472]
          Length = 1069

 Score = 1253 bits (3241), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 629/1077 (58%), Positives = 795/1077 (73%), Gaps = 24/1077 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILI+GAGPIVIGQACEFDYSG QACKAL+EEGY+VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIKSILIIGAGPIVIGQACEFDYSGAQACKALREEGYKVILVNSNPATIMTDPDMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P++  +VE+++ KERPDA+LPTMGGQTALN A+ LA +G LEKY VELIGA  DA
Sbjct: 63   VTYIEPISWPVVEKIIAKERPDAILPTMGGQTALNCALDLARNGVLEKYKVELIGATEDA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  FK+AM  IG+  P S + +T++E +    ++G FP +IRP+FT+GG+GGGI
Sbjct: 123  IDKAEDRGRFKEAMAKIGLSCPLSFVCHTMEESLEAQAKVG-FPTLIRPSFTMGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYNKEEF AIC+ G  AS T ++L+E+S+LGWKEYE+EV+RD  DN +IICSIEN DPMG
Sbjct: 182  AYNKEEFLAICERGFEASPTHELLIEQSVLGWKEYEMEVVRDKNDNCIIICSIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGV+ GGSNVQFA NP  GE++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQIMRNASLAVLREIGVDTGGSNVQFATNPATGEMIVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VG++LD++ NDIT   TPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKIAAKLAVGFTLDELKNDITGGATPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            FAFEKFP ++  LTTQMKSVGE MA+GRT QES QKALR LE G +G+       +  D 
Sbjct: 362  FAFEKFPQADDRLTTQMKSVGEVMAMGRTLQESMQKALRGLETGLAGF-----DPVTTDE 416

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
              +++ L  P P+R+  +  A + GM  D+IH +S ID WFL Q ++++  E  L  + +
Sbjct: 417  AAIRHELGAPGPERILYVADAFRIGMSRDDIHAVSKIDPWFLAQIEDIVGEETALSGRKI 476

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
             +M   +   +KR+GFSD+++     + +  VR KR +LG+ P YKRVDTCAAEF  NT 
Sbjct: 477  EDMDYAELRRLKRKGFSDRRLGELLGTDQAAVRAKRWALGLHPVYKRVDTCAAEFATNTA 536

Query: 627  YMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSN 686
            YMYSSY+ ECES P+ +KKV++LGGGPNRIGQGIEFDYCC H + SL+ +G+ETIM+N N
Sbjct: 537  YMYSSYEEECESNPSDRKKVMVLGGGPNRIGQGIEFDYCCVHAALSLRESGFETIMVNCN 596

Query: 687  PETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHR 746
            PETVSTDYDTSDRLYFEPLT+EDVL +  +E+P G+IVQ+GGQTPLKL+          R
Sbjct: 597  PETVSTDYDTSDRLYFEPLTLEDVLEICRVEKPFGVIVQYGGQTPLKLA----------R 646

Query: 747  LPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEIG 806
               A+G   V I GT+PD IDAAEDRERF  ++ EL ++QP    A++ A+A+ +A EIG
Sbjct: 647  ALEANG---VPIIGTTPDMIDAAEDRERFQKLLNELGLKQPPNRTARAPAEAMKLADEIG 703

Query: 807  YPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALAD 866
            YP+VVRPSYVLGGRAMEIV+    L  Y+  AV+V  + PVL+D++L+DAIE+DVD ++D
Sbjct: 704  YPLVVRPSYVLGGRAMEIVHEPADLERYMREAVKVSNDSPVLLDRFLNDAIEVDVDCVSD 763

Query: 867  SCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNC 926
                VVIGGIM+H+EQAGVHSGDSAC +P  ++  +  D I   T  +A+ LNV GLMN 
Sbjct: 764  G-EQVVIGGIMQHVEQAGVHSGDSACSLPPYSLFPALQDEIRRQTEAMARALNVVGLMNV 822

Query: 927  QYAITTSGD-VYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPK 985
            Q+AI   GD +Y+LE NPRASRTVPFVSK    PLAK AA  M+G SL + GFTKEVIP 
Sbjct: 823  QFAI--QGDTIYVLEVNPRASRTVPFVSKVTSAPLAKIAARAMAGISLAEQGFTKEVIPP 880

Query: 986  HVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVF 1045
              +VKEAV PF KF G D +LGPEM+STGEVMG+  +F  A+ KAQ+ AG +LP +G VF
Sbjct: 881  FYAVKEAVFPFIKFPGVDTILGPEMKSTGEVMGVGKTFAEAYVKAQLGAGDRLPKTGKVF 940

Query: 1046 LSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVA 1105
            LS+ D  K     +A+    +GF +  T GTA  L   G+ V+ V K++EGRPH  DM+ 
Sbjct: 941  LSVRDGDKNGAVDVARELQRLGFGVCCTRGTAKHLTEAGLIVQVVNKVNEGRPHIVDMIK 1000

Query: 1106 NGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTV 1162
            NG+I +++ T         D   +RR  L  +VP  TT+S A A    ++  +S  V
Sbjct: 1001 NGEIDLVINTVDEKRTAIQDSHSIRRSALQARVPQYTTLSAAKAVCVGMKHAESFDV 1057


>gi|254448823|ref|ZP_05062279.1| carbamoyl-phosphate synthase, large subunit [gamma proteobacterium
            HTCC5015]
 gi|198261513|gb|EDY85802.1| carbamoyl-phosphate synthase, large subunit [gamma proteobacterium
            HTCC5015]
          Length = 1076

 Score = 1252 bits (3240), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 631/1085 (58%), Positives = 795/1085 (73%), Gaps = 23/1085 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD+  ILI+GAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDINSILIIGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+    +EQ++ +ERPDALLPTMGGQTALN A+ L + G LEKYGVE+IGA  +A
Sbjct: 63   ATYIEPIHWRNIEQIIAEERPDALLPTMGGQTALNTALDLDKHGVLEKYGVEMIGASKEA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I  AEDRD F+ AM  IG+ +  + +  T+++      EIG FP+IIRP+FT+GG+GGGI
Sbjct: 123  IDTAEDRDKFRIAMDEIGLDSTRAFMAKTMEDAEKALAEIG-FPIIIRPSFTMGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYNK+EF  I + GL  S  +++ +E+S+LGWKEYE+EV+RD ADN +IICSIEN+DPMG
Sbjct: 182  AYNKQEFAEIVRNGLELSPVTEIQLEESILGWKEYEMEVVRDRADNCIIICSIENLDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ +RD S+A++R IGVE GGSNVQFAVNP DG +++IEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQIMRDASLAVLRRIGVETGGSNVQFAVNPEDGRLIIIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITK-KTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ N+IT   TPASFEP+IDYVVTK+PR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGYTLDELQNEITGGATPASFEPTIDYVVTKVPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWG---CSNVKELD 503
            F FEKFP ++  LTTQMKSVGE MA+GR  QES QKALR LE G  G+     S++ E D
Sbjct: 362  FTFEKFPAADDRLTTQMKSVGEVMAIGRNQQESLQKALRGLEIGMDGFNPILASDISEED 421

Query: 504  WDWEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLT 563
                 ++  LR P   R+  I  A ++G   +++ EL+ ID WFL Q ++LI  EQ L  
Sbjct: 422  AKA-IIERELRQPRAFRLWYIAEAYRRGYSSEDVFELTKIDPWFLVQIEDLIAEEQRLAK 480

Query: 564  QSVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEA 623
              V+++ KD  Y++KR+GFSD +IA      E  +RE R    + P YKRVDTCAAEF  
Sbjct: 481  DGVASLDKDRLYQLKRKGFSDARIAQVCGEKEASIRELRHQNHIRPVYKRVDTCAAEFAT 540

Query: 624  NTPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMM 683
            NT YMYSSYD ECE+A T  +K+++LGGGPNRIGQGIEFDYCC H +F+++  GYETIM+
Sbjct: 541  NTAYMYSSYDEECEAATTDNRKIVVLGGGPNRIGQGIEFDYCCVHAAFAMREDGYETIMV 600

Query: 684  NSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLD 743
            N NPETVSTDYDTSDRL+FEPLT+EDVL +I+LE+PEG+IVQ+GGQTPLKL+        
Sbjct: 601  NCNPETVSTDYDTSDRLFFEPLTLEDVLEIIELEKPEGVIVQYGGQTPLKLA-------- 652

Query: 744  EHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAK 803
              R   A+G   V I GT+PDSID AEDRERF A++ +L ++QP    A++  +A+ +A 
Sbjct: 653  --RDLEAAG---VPIIGTTPDSIDLAEDRERFQAMLNKLGLKQPPNRTARNPDEAVDLAD 707

Query: 804  EIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDA 863
            EIGYP+VVRPSYVLGGRAMEIV   E L  Y+  AV V  + PVL+D++L+DAIE+DVDA
Sbjct: 708  EIGYPLVVRPSYVLGGRAMEIVSDREDLNRYMTEAVSVSNDSPVLLDRFLNDAIEVDVDA 767

Query: 864  LADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGL 923
            + D+ GNV+IGG+MEHIE+AGVHSGDSAC +P  T+     D +      +A+ LNV GL
Sbjct: 768  ICDAEGNVLIGGVMEHIEEAGVHSGDSACSLPPYTLDQKTQDELRQQVADMARELNVVGL 827

Query: 924  MNCQYAITTSGD-VYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEV 982
            MN Q+AI   GD +Y+LE NPRASRTVPFVSKA G PLAK AA  M+G SL + G   E+
Sbjct: 828  MNTQFAI--QGDNIYVLEVNPRASRTVPFVSKACGQPLAKIAARCMAGISLKEQGDLSEI 885

Query: 983  IPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSG 1042
            IP+H +VKE+V PF KF G D LLGPEM+STGEVMG+  SF  AFAK+Q+AA   LP SG
Sbjct: 886  IPEHYAVKESVFPFIKFPGVDALLGPEMKSTGEVMGVGQSFGEAFAKSQLAASVVLPESG 945

Query: 1043 TVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGD 1102
              F+S+ D  K     +AK  ++ GF +V+T GTA  L+  G+ V  V K+ +GRPH  D
Sbjct: 946  AAFVSVRDQDKSGAVEVAKHLVEKGFTLVATGGTADVLKEAGLDVTSVNKVTQGRPHIVD 1005

Query: 1103 MVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTV 1162
            M+ NG+I ++V T+ G    + D   +RR  +  KV   TT+SGA A  +A+  + +  V
Sbjct: 1006 MIKNGEIDLVVNTTEGKQSIK-DSYTIRREAMNQKVSTFTTLSGARAMCQALDHIGNCDV 1064

Query: 1163 TMTAL 1167
                L
Sbjct: 1065 NRLQL 1069


>gi|388258741|ref|ZP_10135916.1| ADP-forming, carbamate-phosphorylating [Cellvibrio sp. BR]
 gi|387937500|gb|EIK44056.1| ADP-forming, carbamate-phosphorylating [Cellvibrio sp. BR]
          Length = 1072

 Score = 1252 bits (3240), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 625/1088 (57%), Positives = 801/1088 (73%), Gaps = 28/1088 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD+  +LILGAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDINSVLILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPAMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  + VE+++EKERPD +LPTMGGQTALN A+ALA+ G LEKY VELIGAK +A
Sbjct: 63   ATYIEPIEWQTVEKIIEKERPDVILPTMGGQTALNCALALAKHGVLEKYNVELIGAKEEA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I  AEDR+LF QAMK IG+    + I +TL+E      E G FP IIRP+FT+GG+GGGI
Sbjct: 123  INMAEDRNLFDQAMKRIGLSCARAKIVHTLEEAKEAPKEFG-FPCIIRPSFTMGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN +EFE IC  GL  S T+++L+++SLLGWKEYE+EV+RD  DN +I+CSIEN DPMG
Sbjct: 182  AYNWDEFEEICTRGLDLSPTNELLIDESLLGWKEYEMEVVRDKNDNCIIVCSIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ +R+ SIA++REIGVE GGSNVQFAVNPVDG ++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQIMRNASIAVLREIGVETGGSNVQFAVNPVDGRMVVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL++GY+LD++ N+IT   TPASFEPSIDYVVTK+PR
Sbjct: 302  PRVSRSSALASKATGFPIAKIAAKLAIGYTLDELQNEITGGATPASFEPSIDYVVTKVPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            F FEKF  ++  LTTQMKSVGE MA+GRTFQES QKALR LE G +G+      ++D+  
Sbjct: 362  FTFEKFGEADARLTTQMKSVGEVMAIGRTFQESLQKALRGLEVGSAGFE----SKVDYTT 417

Query: 507  EQ----LKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLL 562
            E+    ++  L     +R+  +  A + GM V++   LS ID WFL Q KELID+EQ L 
Sbjct: 418  EEGAAKVRRELTTAGAERIWYVGDAFRMGMSVNDAFNLSKIDPWFLVQVKELIDIEQSLR 477

Query: 563  TQSVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFE 622
             +S++++  D  +++KR+GFSDK++A    ++EK VR  R  L + P+YKRVDTCAAEF 
Sbjct: 478  GKSLNDLDADQLFKLKRKGFSDKRLALLLGASEKAVRHYRQGLNIRPAYKRVDTCAAEFS 537

Query: 623  ANTPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIM 682
             +T YMYS+Y+ ECE+ P+ KKK+L++GGGPNRIGQGIEFDYCC H + +++  GYETIM
Sbjct: 538  TSTAYMYSTYEEECEANPSDKKKILVIGGGPNRIGQGIEFDYCCVHAALAMREDGYETIM 597

Query: 683  MNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYL 742
            +N NPETVSTDYDTSDRL+FEP+T+EDVL ++  E+P G+IVQFGGQTPLKL+       
Sbjct: 598  VNCNPETVSTDYDTSDRLFFEPVTLEDVLEIVHKEKPVGVIVQFGGQTPLKLA------- 650

Query: 743  DEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIA 802
               R   A G   V I GTSPD+ID AEDRERF  +I +L + QP   I +S  +AL  A
Sbjct: 651  ---RALEAEG---VPIIGTSPDAIDKAEDRERFQQMIHKLGLLQPPNAIVRSLEEALLAA 704

Query: 803  KEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVD 862
             ++GYP+VVRPSYVLGGRAMEIVY ++ L TY+  AV+V  + PVL+D +L++AIE+D+D
Sbjct: 705  DKVGYPLVVRPSYVLGGRAMEIVYKEDELRTYMRTAVQVSEDAPVLLDHFLNNAIEVDID 764

Query: 863  ALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCG 922
            +++D    VVIGGIM+HIEQ GVHSGDSAC +P  ++ +   D +     ++A  L V G
Sbjct: 765  SVSDG-KQVVIGGIMQHIEQCGVHSGDSACSLPPYSLPADVQDAMREQVKQMAIELGVIG 823

Query: 923  LMNCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEV 982
            LMN Q A    G +Y++E NPRASRTVPFVSK IG  LAK AA   +G SL + GFTKE+
Sbjct: 824  LMNTQLAY-QDGKIYVIEVNPRASRTVPFVSKCIGVSLAKVAARCQAGTSLAEQGFTKEI 882

Query: 983  IPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSG 1042
            IP + SVKEAV PF KF   D +LGPEM+STGEVMG+  SF  A+ K+Q+ A  ++P SG
Sbjct: 883  IPDYFSVKEAVFPFNKFPAVDPILGPEMKSTGEVMGVGNSFGEAYGKSQLGANNRIPTSG 942

Query: 1043 TVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGD 1102
            T F+S+ D+ K  +  + +   ++GFK+V+T GTA  LE  G+ V+ V K+ EGRPH  D
Sbjct: 943  TAFISVRDMDKAGIVSVGQDLAELGFKLVATRGTATVLEQAGLTVQVVNKVQEGRPHIVD 1002

Query: 1103 MVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTV 1162
            M+ N +I +++ T  G    + D   +RR    ++V   TT++  LA   A++ +K   +
Sbjct: 1003 MIKNDEIDLIINTVEGRQATR-DSSSIRRSAENHRVYYNTTLAAGLAVCMALKEVKE--I 1059

Query: 1163 TMTALQDF 1170
             +  LQD 
Sbjct: 1060 EVRRLQDL 1067


>gi|237798552|ref|ZP_04587013.1| carbamoyl phosphate synthase large subunit [Pseudomonas syringae pv.
            oryzae str. 1_6]
 gi|331021405|gb|EGI01462.1| carbamoyl phosphate synthase large subunit [Pseudomonas syringae pv.
            oryzae str. 1_6]
          Length = 1073

 Score = 1252 bits (3240), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 627/1088 (57%), Positives = 800/1088 (73%), Gaps = 28/1088 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILILGAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPAMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  + V +++EKERPDALLPTMGGQTALN A+ L   G LEK+GVE+IGA  D 
Sbjct: 63   ATYIEPIKWQTVAKIIEKERPDALLPTMGGQTALNCALDLEREGVLEKFGVEMIGANADT 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  F +AMK+IG+  P SGI ++++E  ++  ++G FP IIRP+FT+GGTGGGI
Sbjct: 123  IDKAEDRSRFDKAMKSIGLACPRSGIAHSMEEANAVLEKLG-FPCIIRPSFTMGGTGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEFE IC  GL  S T ++L+++SL+GWKEYE+EV+RD  DN +I+CSIEN DPMG
Sbjct: 182  AYNREEFEEICARGLDLSPTKELLIDESLIGWKEYEMEVVRDKKDNCIIVCSIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ LR+ S+A++REIGVE GGSNVQF + P  G ++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQILRNASLAVLREIGVETGGSNVQFGICPDTGRMVVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIA++AAKL+VGY+LD++ N+IT  KTPASFEPSIDYVVTK+PR
Sbjct: 302  PRVSRSSALASKATGFPIARVAAKLAVGYTLDELSNEITGGKTPASFEPSIDYVVTKLPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            FAFEKF  ++  LTTQMKSVGE MA+GRTFQES QKALR LE G  G       +LD   
Sbjct: 362  FAFEKFANADARLTTQMKSVGEVMAIGRTFQESLQKALRGLEVGVCGLD----PKLDLSH 417

Query: 507  EQ----LKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLL 562
             +    LK  L VP  +R+  +  A + GM V++I  ++ ID WFL Q ++L+  E+ + 
Sbjct: 418  PESMSTLKRELTVPGAERIWYVADAFRAGMSVEDIFAMNMIDPWFLVQIEDLVKDEEKVK 477

Query: 563  TQSVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFE 622
            T  +S + +D  + +KR+GFSD ++A     TEK +R  R  L V P YKRVDTCAAEF 
Sbjct: 478  TLGLSAIDRDLMFRLKRKGFSDARLAKLLGVTEKNLRTHRHKLEVFPVYKRVDTCAAEFA 537

Query: 623  ANTPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIM 682
             +T Y+YS+Y+ ECE+ P+ + K++ILGGGPNRIGQGIEFDYCC H + +L+  GYETIM
Sbjct: 538  TDTAYLYSTYEEECEANPSTRDKIMILGGGPNRIGQGIEFDYCCVHAALALREDGYETIM 597

Query: 683  MNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYL 742
            +N NPETVSTDYDTSDRLYFEP+T+EDVL ++ +E+P+G+IVQ+GGQTPLKL+       
Sbjct: 598  VNCNPETVSTDYDTSDRLYFEPVTLEDVLEIVRVEKPKGVIVQYGGQTPLKLA------- 650

Query: 743  DEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIA 802
               R   A+G   V I GTSPD+ID AEDRERF  +++ L++ QP     +SE +A+  A
Sbjct: 651  ---RALEAAG---VPIIGTSPDAIDRAEDRERFQHMVERLNLRQPPNATVRSEDEAIRAA 704

Query: 803  KEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVD 862
             +IGYP+VVRPSYVLGGRAMEIVY ++ L  YL  AV+V  + PVL+D +L+ AIE+DVD
Sbjct: 705  AKIGYPLVVRPSYVLGGRAMEIVYQEDELKRYLREAVQVSNDSPVLLDHFLNCAIEMDVD 764

Query: 863  ALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCG 922
            A+ D   +VVIG IM+HIEQAGVHSGDSAC +P  ++ +   D +     K+A  L V G
Sbjct: 765  AVCDGT-DVVIGAIMQHIEQAGVHSGDSACSLPPYSLPAHIQDEMREQVKKMALELGVVG 823

Query: 923  LMNCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEV 982
            LMN Q A+    D+Y++E NPRASRTVPFVSK IG  LA  AA VM+GK+L +L FTKE+
Sbjct: 824  LMNVQLALQGE-DIYVIEVNPRASRTVPFVSKCIGVSLAMIAARVMAGKTLKELNFTKEI 882

Query: 983  IPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSG 1042
            IP   SVKEAV PF KF G D +LGPEM+STGEVMG+  +F  AFAKAQ+ A + LP  G
Sbjct: 883  IPNFYSVKEAVFPFAKFPGVDPILGPEMKSTGEVMGVGDTFGEAFAKAQMGASEVLPTGG 942

Query: 1043 TVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGD 1102
            T F+S+ D  KP +E +A+  +++GF+IV+T+GTA  +E  G+ V RV K+ EGRPH  D
Sbjct: 943  TAFISVRDDDKPLVEAVARDLINLGFEIVATAGTAKLIEAAGLKVRRVNKVTEGRPHVVD 1002

Query: 1103 MVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTV 1162
            M+ N ++ +++ T+ G      D   +RR  L +K+   TT++   A  EA++     TV
Sbjct: 1003 MIKNDEVTLIINTTEGRQ-SIADSYSIRRNALQHKIYCTTTIAAGEAICEALKFGPEKTV 1061

Query: 1163 TMTALQDF 1170
                LQD 
Sbjct: 1062 RR--LQDL 1067


>gi|409422611|ref|ZP_11259702.1| carbamoyl phosphate synthase large subunit [Pseudomonas sp. HYS]
          Length = 1073

 Score = 1252 bits (3240), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 634/1086 (58%), Positives = 797/1086 (73%), Gaps = 24/1086 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILILGAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPAMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  + V +++EKERPDALLPTMGGQTALN A+ L   G LEK+GVE+IGA  D 
Sbjct: 63   ATYIEPIKWQTVAKIIEKERPDALLPTMGGQTALNCALDLEREGILEKFGVEMIGANADT 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  F  AMK IG++ P SGI ++++E  ++  ++G FP IIRP+FT+GGTGGGI
Sbjct: 123  IDKAEDRSRFDTAMKAIGLECPRSGIAHSMEEANAVLEKLG-FPCIIRPSFTMGGTGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEFE IC  GL  S T ++L+++SL+GWKEYE+EV+RD  DN +I+CSIEN DPMG
Sbjct: 182  AYNREEFEEICARGLDLSPTKELLIDESLIGWKEYEMEVVRDKKDNCIIVCSIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGVE GGSNVQF + P  G ++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQIMRNASLAVLREIGVETGGSNVQFGICPDTGRMVVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT  +TPASFEPSIDYVVTK+PR
Sbjct: 302  PRVSRSSALASKATGFPIAKIAAKLAVGYTLDELQNDITGGRTPASFEPSIDYVVTKLPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            FAFEKFP ++  LTTQMKSVGE MA+GRTFQES QKALR LE G SG     V     D 
Sbjct: 362  FAFEKFPKADARLTTQMKSVGEVMAIGRTFQESLQKALRGLEVGVSGLD-PKVDLASPDA 420

Query: 507  EQ-LKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQS 565
               LK  L VP  +R+  +  AM+ GM  DEI  L+ ID WFL Q ++LI  E+ + T +
Sbjct: 421  ASILKRELTVPGAERIWYVADAMRSGMTCDEIFALTGIDHWFLVQMEDLIKDEEKVKTLA 480

Query: 566  VSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANT 625
            +S + KD    +KR+GFSD+++A     T+K +R  R  L V P YKRVDTCAAEF  +T
Sbjct: 481  LSAIDKDLMLRLKRKGFSDQRLAKLLGITDKNLRRHRHKLEVFPVYKRVDTCAAEFATDT 540

Query: 626  PYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNS 685
             Y+YS+Y+ ECE+ P+ + K++ILGGGPNRIGQGIEFDYCC H + +L+  GYETIM+N 
Sbjct: 541  AYLYSTYEEECEANPSTRDKIMILGGGPNRIGQGIEFDYCCVHAALALREDGYETIMVNC 600

Query: 686  NPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEH 745
            NPETVSTDYDTSDRLYFEPLT+EDVL V+ +E+P+G+IV +GGQTPLKL+    + L+E 
Sbjct: 601  NPETVSTDYDTSDRLYFEPLTLEDVLEVVRVEKPKGVIVHYGGQTPLKLA----RALEEA 656

Query: 746  RLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEI 805
             +P         I GTSPD+ID AEDRERF  +++ L++ QP     +SE +A+  A  I
Sbjct: 657  GVP---------IIGTSPDAIDRAEDRERFQQMVQRLNLLQPPNATVRSEDEAIRAAGII 707

Query: 806  GYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALA 865
            GYP+VVRPSYVLGGRAMEIVY  + L  YL  AV+V  + PVL+D +L+ AIE+DVDA+ 
Sbjct: 708  GYPLVVRPSYVLGGRAMEIVYELDELKRYLREAVQVSNDSPVLLDHFLNCAIEMDVDAVC 767

Query: 866  DSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMN 925
            D   +VVIG IM+HIEQAGVHSGDSAC +P  ++ +   D +     K+A  L V GLMN
Sbjct: 768  DGT-DVVIGAIMQHIEQAGVHSGDSACSLPPYSLPAHVQDEVREQVKKMALELGVVGLMN 826

Query: 926  CQYAITTSGD-VYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIP 984
             Q A+   GD +Y++E NPRASRTVPFVSK IG  LA  AA VM+GKSL ++GFTKE+IP
Sbjct: 827  VQLAL--QGDKIYVIEVNPRASRTVPFVSKCIGTSLAMIAARVMAGKSLKEIGFTKEIIP 884

Query: 985  KHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTV 1044
               SVKEAV PF KF G D +LGPEM+STGEVMG+  SF  AFAKAQ+ A + LP  GT 
Sbjct: 885  NFYSVKEAVFPFAKFPGVDPILGPEMKSTGEVMGVGDSFGEAFAKAQMGASEVLPTGGTA 944

Query: 1045 FLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMV 1104
            F+S+ D  KP +  +A+  + +GF++V+T GTA  +E  G+ V RV K+ EGRPH  DM+
Sbjct: 945  FISVRDDDKPQVAGVARDLIALGFEVVATVGTAKVIEAAGLKVRRVNKVTEGRPHVVDMI 1004

Query: 1105 ANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTVTM 1164
             N ++ +++ T+ G      D   +RR  L +K+   TT++   A  EA++     TV  
Sbjct: 1005 KNDEVSLIINTTEGRQ-SIADSYSIRRNALQHKIYCTTTIAAGEAICEALKFGPEKTVRR 1063

Query: 1165 TALQDF 1170
              LQD 
Sbjct: 1064 --LQDL 1067


>gi|398983404|ref|ZP_10690013.1| carbamoyl-phosphate synthase, large subunit [Pseudomonas sp. GM24]
 gi|399014415|ref|ZP_10716706.1| carbamoyl-phosphate synthase, large subunit [Pseudomonas sp. GM16]
 gi|398110980|gb|EJM00872.1| carbamoyl-phosphate synthase, large subunit [Pseudomonas sp. GM16]
 gi|398157305|gb|EJM45701.1| carbamoyl-phosphate synthase, large subunit [Pseudomonas sp. GM24]
          Length = 1073

 Score = 1252 bits (3240), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 627/1088 (57%), Positives = 803/1088 (73%), Gaps = 28/1088 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILILGAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPDMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  + V +++EKERPDA+LPTMGGQTALN A+ L   G LEK+GVE+IGA  D 
Sbjct: 63   ATYIEPIKWQTVAKIIEKERPDAVLPTMGGQTALNCALDLEREGVLEKFGVEMIGANADT 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  F +AMK+IG+  P SGI ++++E  ++   +G FP IIRP+FT+GGTGGGI
Sbjct: 123  IDKAEDRSRFDKAMKSIGLACPRSGIAHSMEEANAVLETLG-FPCIIRPSFTMGGTGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEFE IC  GL  S T ++L+++SL+GWKEYE+EV+RD  DN +I+CSIEN DPMG
Sbjct: 182  AYNREEFEEICARGLDLSPTKELLIDESLIGWKEYEMEVVRDKKDNCIIVCSIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ LR+ S+A++REIGVE GGSNVQF + P  G ++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQILRNASLAVLREIGVETGGSNVQFGICPNTGRMVVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT  KTPASFEPSIDYVVTK+PR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGYTLDELSNDITGGKTPASFEPSIDYVVTKLPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            FAFEKF  ++  LTTQMKSVGE MA+GRTFQES QKALR LE G  G      ++LD   
Sbjct: 362  FAFEKFAKADARLTTQMKSVGEVMAIGRTFQESLQKALRGLEVGVCGLD----EKLDLSN 417

Query: 507  EQ----LKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLL 562
             +    LK  L VP  +R+  +  A + G+ V++I  ++ ID WFL Q ++LI  E+ + 
Sbjct: 418  PESMSVLKRELTVPGAERIWYVADAFRAGLSVEDIFGMNMIDPWFLVQIEDLIKEEEKVK 477

Query: 563  TQSVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFE 622
            T  +S + +D  +++KR+GFSD+++A     TEK +R  R  L V P YKRVDTCAAEF 
Sbjct: 478  TLGLSAIDRDLMFKLKRKGFSDQRLAKLLGVTEKNLRTHRQKLEVFPVYKRVDTCAAEFA 537

Query: 623  ANTPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIM 682
             +T Y+YS+Y+ ECE+AP+ + K++ILGGGPNRIGQGIEFDYCC H + +L+  GYETIM
Sbjct: 538  TDTAYLYSTYEEECEAAPSGRDKIMILGGGPNRIGQGIEFDYCCVHAALALREDGYETIM 597

Query: 683  MNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYL 742
            +N NPETVSTDYDTSDRLYFEP+T+EDVL +  +E+P+G+IVQ+GGQTPLKL+       
Sbjct: 598  VNCNPETVSTDYDTSDRLYFEPVTLEDVLEICRVEKPKGVIVQYGGQTPLKLA------- 650

Query: 743  DEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIA 802
               R   A+G   V I GTSPD+ID AEDRERF  +++ L++ QP     +SE +A+  A
Sbjct: 651  ---RALEAAG---VPIIGTSPDAIDRAEDRERFQQMVERLNLRQPPNATVRSEDEAVRAA 704

Query: 803  KEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVD 862
             +IGYP+VVRPSYVLGGRAMEIVY ++ L  YL +AV+V  + PVL+D +L+ AIE+DVD
Sbjct: 705  AKIGYPLVVRPSYVLGGRAMEIVYKEDELKRYLRDAVQVSNDSPVLLDHFLNCAIEMDVD 764

Query: 863  ALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCG 922
            A+ D   +VVIG IM+HIEQAGVHSGDSAC +P  ++ +   D +     K+A  L V G
Sbjct: 765  AVCDG-KDVVIGAIMQHIEQAGVHSGDSACSLPPYSLPAHIQDEMREQVKKMALELGVVG 823

Query: 923  LMNCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEV 982
            LMN Q A+    D+Y++E NPRASRTVPFVSK IG  LA  AA VM+GK+L ++GFTKE+
Sbjct: 824  LMNVQLALQGE-DIYVIEVNPRASRTVPFVSKCIGVSLAMIAARVMAGKTLKEIGFTKEI 882

Query: 983  IPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSG 1042
            IP   SVKEAV PF KF G D +LGPEM+STGEVMG+  +F  AFAKAQ+ A + LP  G
Sbjct: 883  IPNFYSVKEAVFPFAKFPGVDPILGPEMKSTGEVMGVGDTFGEAFAKAQMGASEVLPTGG 942

Query: 1043 TVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGD 1102
            T F+S+ D  KP +  +A+  +++GF++V+T+GTA  +E  G+ V RV K+ EGRPH  D
Sbjct: 943  TAFISVRDDDKPLVAGVARDLINLGFEVVATAGTAKLIEAAGLKVRRVNKVTEGRPHVVD 1002

Query: 1103 MVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTV 1162
            M+ N ++ +++ T+ G      D   +RR  L +K+   TT++   A  EA++     TV
Sbjct: 1003 MIKNDEVTLIINTTEGRQ-SIADSYSIRRNALQHKIYCTTTIAAGEAICEALKFGPEKTV 1061

Query: 1163 TMTALQDF 1170
                LQD 
Sbjct: 1062 RR--LQDL 1067


>gi|410089677|ref|ZP_11286290.1| carbamoyl phosphate synthase large subunit [Pseudomonas viridiflava
            UASWS0038]
 gi|409763064|gb|EKN48052.1| carbamoyl phosphate synthase large subunit [Pseudomonas viridiflava
            UASWS0038]
          Length = 1073

 Score = 1252 bits (3239), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 628/1088 (57%), Positives = 797/1088 (73%), Gaps = 28/1088 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILILGAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPAMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  + V +++EKERPDALLPTMGGQTALN A+ L   G LEK+GVE+IGA  D 
Sbjct: 63   ATYIEPIKWQTVAKIIEKERPDALLPTMGGQTALNCALDLEREGVLEKFGVEMIGANADT 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  F +AMK+IG+  P SGI ++++E  ++   +G FP IIRP+FT+GGTGGGI
Sbjct: 123  IDKAEDRSRFDKAMKSIGLDCPRSGIAHSMEEANAVLERLG-FPCIIRPSFTMGGTGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEFE IC  GL  S T ++L+++SL+GWKEYE+EV+RD  DN +I+CSIEN DPMG
Sbjct: 182  AYNREEFEEICARGLDLSPTKELLIDESLIGWKEYEMEVVRDKKDNCIIVCSIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ LR+ S+A++REIGVE GGSNVQF + P  G ++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQILRNASLAVLREIGVETGGSNVQFGICPDTGRMVVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIA++AAKL+VGY+LD++ NDIT  KTPASFEPSIDYVVTK+PR
Sbjct: 302  PRVSRSSALASKATGFPIARIAAKLAVGYTLDELSNDITGGKTPASFEPSIDYVVTKLPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            FAFEKF  ++  LTTQMKSVGE MA+GRTFQES QKALR LE G  G       +LD   
Sbjct: 362  FAFEKFAKADARLTTQMKSVGEVMAIGRTFQESLQKALRGLEVGVCGLD----PKLDLSH 417

Query: 507  EQ----LKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLL 562
             +    LK  L VP  +R+  +  A + GM V++I  ++ ID WFL Q ++LI  E+ + 
Sbjct: 418  PESMSTLKRELTVPGAERIWYVADAFRAGMSVEDIFAMNMIDPWFLVQIEDLIKDEEKVK 477

Query: 563  TQSVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFE 622
            T  +S + +D  + +KR+GFSD ++A     TEK +R  R  L V P YKRVDTCAAEF 
Sbjct: 478  TLGLSAIDRDLMFRLKRKGFSDARLAKLLGVTEKNLRTHRHKLEVFPVYKRVDTCAAEFA 537

Query: 623  ANTPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIM 682
             +T Y+YS+Y+ ECE+ P+ + K++ILGGGPNRIGQGIEFDYCC H + +L+  GYETIM
Sbjct: 538  TDTAYLYSTYEEECEANPSTRNKIMILGGGPNRIGQGIEFDYCCVHAALALRDDGYETIM 597

Query: 683  MNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYL 742
            +N NPETVSTDYDTSDRLYFEP+T+EDVL ++ +E+P+G+IVQ+GGQTPLKL+       
Sbjct: 598  VNCNPETVSTDYDTSDRLYFEPVTLEDVLEIVRVEKPKGVIVQYGGQTPLKLA------- 650

Query: 743  DEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIA 802
               R   A+G   V I GTSPD+ID AEDRERF  +++ L++ QP     +SE +A+  A
Sbjct: 651  ---RALEAAG---VPIIGTSPDAIDRAEDRERFQQMVERLNLRQPPNATVRSEDEAIRAA 704

Query: 803  KEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVD 862
             +IGYP+VVRPSYVLGGRAMEIVY ++ L  YL  AV+V  + PVL+D +L+ AIE+DVD
Sbjct: 705  AKIGYPLVVRPSYVLGGRAMEIVYQEDELKRYLREAVQVSNDSPVLLDHFLNCAIEMDVD 764

Query: 863  ALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCG 922
            A+ D   +VVIG IM+HIEQAGVHSGDSAC +P  ++ +   D +     K+A  L V G
Sbjct: 765  AVCDGT-DVVIGAIMQHIEQAGVHSGDSACSLPPYSLPAHIQDEMREQVKKMALELGVVG 823

Query: 923  LMNCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEV 982
            LMN Q A+    D+Y++E NPRASRTVPFVSK IG  LA  AA VM+GK+L +L FTKE+
Sbjct: 824  LMNVQLALQGE-DIYVIEVNPRASRTVPFVSKCIGVSLAMIAARVMAGKTLKELNFTKEI 882

Query: 983  IPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSG 1042
            IP   SVKEAV PF KF G D +LGPEM+STGEVMG+  +F  AFAKAQ+ A + LP  G
Sbjct: 883  IPNFYSVKEAVFPFAKFPGVDPILGPEMKSTGEVMGVGDTFGEAFAKAQMGASEVLPTGG 942

Query: 1043 TVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGD 1102
            T F+S+ D  KP +  +A+  + +GF+IV+T+GTA  +E  G+ V RV K+ EGRPH  D
Sbjct: 943  TAFISVRDDDKPLVAGVARDLISLGFQIVATAGTAKLIEAAGLKVRRVNKVTEGRPHVVD 1002

Query: 1103 MVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTV 1162
            M+ N ++ +++ T+ G      D   +RR  L +K+   TT++   A  EA++     TV
Sbjct: 1003 MIKNDEVTLIINTTEGRQ-SIADSYSIRRNALQHKIYCTTTIAAGEAICEALKFGPEKTV 1061

Query: 1163 TMTALQDF 1170
                LQD 
Sbjct: 1062 RR--LQDL 1067


>gi|388547475|ref|ZP_10150739.1| carbamoyl phosphate synthase large subunit [Pseudomonas sp. M47T1]
 gi|388274396|gb|EIK93994.1| carbamoyl phosphate synthase large subunit [Pseudomonas sp. M47T1]
          Length = 1073

 Score = 1252 bits (3239), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 631/1086 (58%), Positives = 800/1086 (73%), Gaps = 24/1086 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILILGAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPDMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  + V +++EKERPDA+LPTMGGQTALN A+ L   G LEK+GVE+IGA  D 
Sbjct: 63   ATYIEPIKWQTVAKIIEKERPDAVLPTMGGQTALNCALDLEREGVLEKFGVEMIGANADT 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  F +AMK+IG+  P SGI +T++E  ++   +G FP IIRP+FT+GGTGGGI
Sbjct: 123  IDKAEDRSRFDKAMKSIGLACPRSGIAHTMEEANAVLETLG-FPCIIRPSFTMGGTGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEFE IC  GL  S T ++L+++SL+GWKEYE+EV+RD  DN +I+CSIEN DPMG
Sbjct: 182  AYNREEFEEICARGLDLSPTKELLIDESLIGWKEYEMEVVRDKKDNCIIVCSIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ LR+ S+A++REIGVE GGSNVQF + P  G ++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQILRNASLAVLREIGVETGGSNVQFGICPDTGRMVVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT  KTPASFEPSIDYVVTK+PR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGYTLDELQNDITGGKTPASFEPSIDYVVTKLPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            FAFEKFP ++  LTTQMKSVGE MA+GRTFQES QKALR LE G  G     V+  + ++
Sbjct: 362  FAFEKFPKADARLTTQMKSVGEVMAIGRTFQESLQKALRGLEVGVCGLD-PKVEPSNPEF 420

Query: 507  EQ-LKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQS 565
               LK  L VP  +R+  +  A + GM  DEI  L+ ID WFL Q ++LI  E+ + T  
Sbjct: 421  HSILKRELTVPGAERIWYVADAFRSGMTCDEIFALTMIDHWFLVQIEDLIKDEEKVKTLG 480

Query: 566  VSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANT 625
            ++++ K    ++KR+GFSD+++A     T+K +R  R  L + P YKRVDTCAAEF  +T
Sbjct: 481  LADIDKALMLKLKRKGFSDQRLAKLLGVTDKNLRRHRHKLEIFPVYKRVDTCAAEFATDT 540

Query: 626  PYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNS 685
             Y+YS+Y+ ECE+ P+ + K++ILGGGPNRIGQGIEFDYCC H + +L+  GYETIM+N 
Sbjct: 541  AYLYSTYEEECEANPSTRDKIMILGGGPNRIGQGIEFDYCCVHAALALREDGYETIMVNC 600

Query: 686  NPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEH 745
            NPETVSTDYDTSDRLYFEPLT+EDVL V+ +E+P+G+IVQ+GGQTPLKL+    + L+E 
Sbjct: 601  NPETVSTDYDTSDRLYFEPLTLEDVLEVVRVEKPKGVIVQYGGQTPLKLA----RALEEA 656

Query: 746  RLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEI 805
             +P         I GTSPD+ID AEDRERF  +++ L++ QP     +SE +A+  A  I
Sbjct: 657  GVP---------IIGTSPDAIDRAEDRERFQQMVQRLNLLQPPNATVRSEEEAIRAAGVI 707

Query: 806  GYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALA 865
            GYP+VVRPSYVLGGRAMEIVY  + L  YL  AV+V  + PVL+D +L+ AIE+DVDA+ 
Sbjct: 708  GYPLVVRPSYVLGGRAMEIVYELDELKRYLREAVQVSNDSPVLLDHFLNCAIEMDVDAVC 767

Query: 866  DSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMN 925
            D   +VVIG IM+HIEQAGVHSGDSAC +P  ++ +   D +     K+A  L V GLMN
Sbjct: 768  DGT-DVVIGAIMQHIEQAGVHSGDSACSLPPYSLPAHVQDEVREQVKKMALELGVVGLMN 826

Query: 926  CQYAITTSGD-VYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIP 984
             Q A+   GD +Y++E NPRASRTVPFVSK IG  LA  AA VM+GK+L +LGFTKE+IP
Sbjct: 827  VQLAL--QGDKIYVIEVNPRASRTVPFVSKCIGTSLAMIAARVMAGKTLKELGFTKEIIP 884

Query: 985  KHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTV 1044
               SVKEAV PF KF G D +LGPEM+STGEVMG+  +F  AFAKAQ+ A + LP  GT 
Sbjct: 885  NFYSVKEAVFPFAKFPGVDPILGPEMKSTGEVMGVGDTFGEAFAKAQMGASEVLPTGGTA 944

Query: 1045 FLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMV 1104
            F+S+ D  KP +  +A+  + +GF++V+T+GTA  +E  G+ V RV K+ EGRPH  DM+
Sbjct: 945  FISVRDDDKPLVAGVARDLIALGFEVVATAGTARVIEEAGLKVRRVNKVTEGRPHVVDMI 1004

Query: 1105 ANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTVTM 1164
             N Q+ +++ T+ G      D   +RR  L +K+   TT++   A  EA++     TV  
Sbjct: 1005 KNDQVTLIINTTEGRQ-SIADSYSIRRNALQHKIYCTTTIAAGEAICEALKFGPEKTVRR 1063

Query: 1165 TALQDF 1170
              LQD 
Sbjct: 1064 --LQDL 1067


>gi|327399335|ref|YP_004340204.1| carbamoyl-phosphate synthase large subunit [Hippea maritima DSM
            10411]
 gi|327181964|gb|AEA34145.1| carbamoyl-phosphate synthase, large subunit [Hippea maritima DSM
            10411]
          Length = 1068

 Score = 1252 bits (3239), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 624/1088 (57%), Positives = 795/1088 (73%), Gaps = 33/1088 (3%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTDL+KI+I+G+GPIVIGQACEFDYSGTQACKALK EGYE++L+NSNPATIMTDP LAD
Sbjct: 3    KRTDLKKIMIIGSGPIVIGQACEFDYSGTQACKALKNEGYEIVLVNSNPATIMTDPMLAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
            +TYI P+T E +E+++ KERPDALLPT+GGQTALN A+ L ++G L++YGVELIGA    
Sbjct: 63   KTYIEPITVEFLEKIIAKERPDALLPTLGGQTALNAAMDLHKAGVLDRYGVELIGANAQT 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I++AEDR+LFKQAM  IG+K P SG+ ++L E   I N I  FP+IIRP+FTLGGTG G+
Sbjct: 123  IERAEDRELFKQAMNEIGLKVPASGVAHSLSEAWEIVNAI-HFPVIIRPSFTLGGTGAGV 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYNKEEFE + K GL  S  ++VL+E+S+LGWKE+ELEVMRD  DNV IICSIEN DPMG
Sbjct: 182  AYNKEEFEEVVKWGLEQSPVNEVLIEQSVLGWKEFELEVMRDKKDNVFIICSIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            +HTGDSIT+APAQTLTDKEYQ LRD +I IIR++GVE GGSN+QFAVNP +GE +VIEMN
Sbjct: 242  IHTGDSITIAPAQTLTDKEYQILRDAAIDIIRKVGVETGGSNIQFAVNPENGEFVVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRF 447
            PRVSRSSALASKATGFPIAK AA LSVGY+LD+IPNDITKKTPASFEP +DYVV KIPRF
Sbjct: 302  PRVSRSSALASKATGFPIAKFAALLSVGYTLDEIPNDITKKTPASFEPVLDYVVVKIPRF 361

Query: 448  AFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGW---GCSNVKELDW 504
             FEKF   +  L TQMKSVGE MA+GRTF+E+FQKA+RSLE  + G+    CS+      
Sbjct: 362  TFEKFNTPDE-LGTQMKSVGEVMAIGRTFKEAFQKAIRSLEYNWDGFVKLNCSD------ 414

Query: 505  DWEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQ 564
              ++LK  L  PN  R   +  A ++G  ++ ++EL++ID+WFL   K++++ E+ L   
Sbjct: 415  --DELKQKLIHPNSKRFLYVAEAFRRGYDIEYLYELTYIDRWFLHNIKQMVEKEEELSKN 472

Query: 565  SVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEAN 624
               ++ + +    K+ GFSD  +A  T  +E ++R+ R     +  YK VDTC+AEFEA 
Sbjct: 473  --PDLLEKNIKRFKQYGFSDSYLAKLTGKSEADIRQLRQKNNCVNVYKMVDTCSAEFEAY 530

Query: 625  TPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMN 684
            TPY YS+Y+ E ES P+  KKV+ILG GPNRIGQGIEFDY C H S  L++ GYE+IM+N
Sbjct: 531  TPYFYSTYEDENESLPSNNKKVVILGSGPNRIGQGIEFDYTCVHGSLELRNEGYESIMVN 590

Query: 685  SNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDE 744
             NPETVSTDYD SDRLYFEPL  EDV+N+I+ E+PEG+IVQFGGQTPLKLSLP+      
Sbjct: 591  CNPETVSTDYDISDRLYFEPLVFEDVMNIIENEKPEGVIVQFGGQTPLKLSLPLK----- 645

Query: 745  HRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKE 804
                    +  V+I GT P SID AEDRE F  +IK+L + QP+ GIA S+ +A+ +A  
Sbjct: 646  --------NAGVKILGTDPKSIDIAEDRELFRELIKKLDLLQPESGIAHSKEEAIEVATR 697

Query: 805  IGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDAL 864
            +GYPV+VRPSYVLGGRAM I++ +E L  Y++ AV+V  ERP+L+DK+L DAIE+DVDA+
Sbjct: 698  VGYPVLVRPSYVLGGRAMMIIFNEEQLRQYVDEAVQVTGERPLLVDKFLEDAIEVDVDAV 757

Query: 865  ADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLM 924
            +D   + V+  +MEHIE AGVHSGDSAC IP +T+    +  I   T  LAK LNV GL+
Sbjct: 758  SDG-EDTVVAAVMEHIEAAGVHSGDSACSIPPRTLKKEIVSEIKRQTRLLAKELNVKGLI 816

Query: 925  NCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIP 984
            N Q+A+     +Y+LE NPRASRTVPFVSKA G   AK A  ++ GK + +LG  KEV P
Sbjct: 817  NIQFAVKND-RIYILEVNPRASRTVPFVSKATGVHWAKIATQLIMGKKIKELGL-KEVEP 874

Query: 985  KHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTV 1044
            K+ +VKE+V PF KF   D+ LGPEMRSTGEVMGI   FPIA+ KA +A+G +LP SG V
Sbjct: 875  KYYAVKESVFPFVKFPNVDITLGPEMRSTGEVMGIADEFPIAYYKALLASGMRLPQSGNV 934

Query: 1045 FLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMV 1104
            F+SL+D  KP    IA   L++GF +  T GT  +L+ +GI V+ V K+ EGRP+  D +
Sbjct: 935  FMSLSDRDKPQGVIIASKLLELGFDVFCTKGTYEYLKKEGINVKYVKKLSEGRPNVLDKM 994

Query: 1105 ANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSL-KSNTVT 1163
             N  I  ++ T SG    + D   +RR  L   +P  TT+SGA+A   AI ++ K   + 
Sbjct: 995  KNNNIHFLINTPSGKR-SRTDSFYIRRTALMMNIPYCTTISGAIAAVRAIEAIAKGKKLD 1053

Query: 1164 MTALQDFF 1171
            +  +QD++
Sbjct: 1054 VVPIQDYY 1061


>gi|345874106|ref|ZP_08825922.1| carbamoyl-phosphate synthase, large subunit [Neisseria weaveri LMG
            5135]
 gi|343970751|gb|EGV38922.1| carbamoyl-phosphate synthase, large subunit [Neisseria weaveri LMG
            5135]
          Length = 1069

 Score = 1252 bits (3239), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 622/1084 (57%), Positives = 808/1084 (74%), Gaps = 24/1084 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTDL+ ILI+GAGPIVIGQACEFDYSG QACKAL+EEGY+VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDLKSILIIGAGPIVIGQACEFDYSGAQACKALREEGYKVILVNSNPATIMTDPEMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  + VE+++ KERPDA+LPTMGGQTALN A+ LA +G L KY VELIGA  DA
Sbjct: 63   VTYIEPIMWQTVEKIIAKERPDAVLPTMGGQTALNCALDLARNGVLAKYNVELIGATEDA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  FK+AM+ IG+  P S + +T++E ++   ++G FP +IRP+FT+GG+GGGI
Sbjct: 123  IDKAEDRGRFKEAMEKIGLSCPKSFVCHTMNEALAAQEQVG-FPTLIRPSFTMGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYNK+EF AIC+ G  AS T ++L+E+S+LGWKEYE+EV+RD  DN +IICSIEN DPMG
Sbjct: 182  AYNKDEFLAICERGFDASPTHELLIEQSVLGWKEYEMEVVRDKNDNCIIICSIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGV+ GGSNVQFA+NP +GE++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQIMRNASLAVLREIGVDTGGSNVQFAINPENGEMIVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VG++LD++ NDIT  +TPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGFTLDELRNDITGGRTPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            FAFEKFP ++  LTTQMKSVGE MA+GRT QES QKALR LE G  G+          D 
Sbjct: 362  FAFEKFPAADDRLTTQMKSVGEVMAMGRTIQESMQKALRGLETGLCGFNPRT-----QDA 416

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
             +++  L  P P+RM  +  A + G   +EIHE+  ID WFL Q ++L+  EQ +   ++
Sbjct: 417  AEIRRELANPGPERMLFVADAFRAGFSKEEIHEICAIDPWFLAQIEDLVKEEQAVAAGTL 476

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
              +   D   +KR+GFSDK+++     +EK VRE R SL + P YKRVDTCAAEF  +T 
Sbjct: 477  QALGYADLRRLKRKGFSDKRLSQLLNVSEKAVREHRYSLNLHPVYKRVDTCAAEFATDTA 536

Query: 627  YMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSN 686
            Y+YS+Y+ ECE+ P++K+KV+ILGGGPNRIGQGIEFDYCC H + +L+ +G+ETIM+N N
Sbjct: 537  YLYSTYEEECEARPSEKRKVMILGGGPNRIGQGIEFDYCCVHAALALRESGFETIMVNCN 596

Query: 687  PETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHR 746
            PETVSTD+DTSDRLYFEPLT+EDVL ++  E P G+IV +GGQTPLKL+           
Sbjct: 597  PETVSTDFDTSDRLYFEPLTLEDVLEIVRTENPWGVIVHYGGQTPLKLA----------- 645

Query: 747  LPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEIG 806
              +A  +  V I GTS DSIDAAEDRERF  ++ +L + QP    A++E +AL +A+EIG
Sbjct: 646  --NALVENGVNIIGTSADSIDAAEDRERFQKVLNDLGLRQPPNRTARNEEEALRLAEEIG 703

Query: 807  YPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALAD 866
            YP+VVRPSYVLGGRAM++V++ + L TY+  AV+V  + PVL+D +L++AIE+DVD ++D
Sbjct: 704  YPLVVRPSYVLGGRAMQVVHSQDQLKTYMREAVQVSEDSPVLLDFFLNNAIEVDVDCVSD 763

Query: 867  SCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNC 926
               +VVIGGIM+H+EQAG+HSGDS C +P  ++S    D I   T  +A  LNV GLMN 
Sbjct: 764  G-KDVVIGGIMQHVEQAGIHSGDSGCSLPPYSLSEDIQDEIRRQTKAMAYALNVVGLMNV 822

Query: 927  QYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPKH 986
            Q+A+   G V++LE NPRASRTVPFVSKA   PLAK  A  M+G SL + G  KEVIP  
Sbjct: 823  QFAV-QDGVVFVLEVNPRASRTVPFVSKATSVPLAKIGARCMAGISLKEQGVEKEVIPDF 881

Query: 987  VSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVFL 1046
             +VKEAV PF KF G D +LGPEMRSTGEVMG+  +F  A+ KAQ+ AG+++P +G VFL
Sbjct: 882  YAVKEAVFPFIKFPGVDTILGPEMRSTGEVMGVAETFGEAYLKAQLGAGERMPATGKVFL 941

Query: 1047 SLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVAN 1106
            ++ D  KP + + A+ F  +G+ + +T GTA +L+ +G+ V+ V K+ EGRPH  D + N
Sbjct: 942  AVKDEDKPLVVKTAQNFQALGYGVCATRGTAAYLKEQGVTVQVVNKVLEGRPHIVDAIKN 1001

Query: 1107 GQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTVTMTA 1166
            G+I M+V T   +     D   +RR  L  +VP  TTV+G  A +E ++SL  N +++ +
Sbjct: 1002 GEIAMVVNTVVSNPQAVADSHSIRRSALTQRVPQYTTVAGGEAMSEGVKSL--NNISVYS 1059

Query: 1167 LQDF 1170
            +Q+ 
Sbjct: 1060 VQEL 1063


>gi|335420624|ref|ZP_08551661.1| carbamoyl-phosphate synthase large subunit [Salinisphaera shabanensis
            E1L3A]
 gi|334894360|gb|EGM32556.1| carbamoyl-phosphate synthase large subunit [Salinisphaera shabanensis
            E1L3A]
          Length = 1074

 Score = 1251 bits (3238), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 625/1078 (57%), Positives = 797/1078 (73%), Gaps = 21/1078 (1%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTDL+ IL++GAGPIVIGQACEFDYSG QACKALK+EG+ VIL+NSNPATIMTDP  AD
Sbjct: 3    KRTDLKSILVIGAGPIVIGQACEFDYSGMQACKALKDEGFRVILVNSNPATIMTDPETAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
              YI P+T   VE+++E E+PDALLPTMGGQTALN A+ L   G L K+G+E+IGA  +A
Sbjct: 63   AVYIEPITCPTVERIIEAEKPDALLPTMGGQTALNCALDLYNQGVLAKHGIEMIGATQEA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I  AEDR  F+ AM  IG+ TP S + +T+DE + +   IG FP+I+RP+FTLGGTGGGI
Sbjct: 123  IDMAEDRSAFRVAMTEIGLATPESAVVHTMDEGVEVQARIG-FPIIMRPSFTLGGTGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEFE +   GL  S T++VL+E+S+LGWKEYE+EV+RD ADN +IIC+IENVD MG
Sbjct: 182  AYNREEFEDLLSRGLELSPTNEVLLEQSVLGWKEYEMEVVRDHADNCIIICAIENVDAMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTD+EYQ +RD SIA +R+IGV+ GGSNVQFA+NP DG++++IEMN
Sbjct: 242  VHTGDSITVAPAQTLTDREYQVMRDASIACLRKIGVDTGGSNVQFAINPADGKMIIIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ N+IT   TPASFEPSIDYVVTK+PR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGYTLDELDNEITGGATPASFEPSIDYVVTKMPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            F FEKFP ++  LTTQMKSVGEAMA+GR+FQES QKA+RSLE G  G+    + +L  D 
Sbjct: 362  FTFEKFPAADSRLTTQMKSVGEAMAIGRSFQESLQKAMRSLEIGSDGFE-PKLDDLTSDA 420

Query: 507  --EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQ 564
              + L+  L  P  +RM  I  A + G  ++E+H L+ ID WFL Q +ELI +E  L   
Sbjct: 421  AKDTLRAELSTPRAERMWYIGDAFRAGFTLEEVHRLTHIDPWFLDQIEELIAMEGALSQS 480

Query: 565  SVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEAN 624
            ++ ++  D     KR+GFSD ++A      E  VR  RL  G++P YKRVD+CAAEF   
Sbjct: 481  TLGDIDADTLRAYKRKGFSDLRLATLLGCDEFAVRRARLKNGIVPVYKRVDSCAAEFPTA 540

Query: 625  TPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMN 684
            T Y YSSYD ECE++P+ + K+++LGGGPNRIGQGIEFDYCC H + +++  GYETIM+N
Sbjct: 541  TAYQYSSYDEECEASPSGRDKIMVLGGGPNRIGQGIEFDYCCVHAALAMREDGYETIMVN 600

Query: 685  SNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDE 744
             NPETVSTDYDTSDRLYFEPLT EDV+++ID+E+P+G+IVQ+GGQTPLKL+         
Sbjct: 601  CNPETVSTDYDTSDRLYFEPLTFEDVMSIIDVEKPKGVIVQYGGQTPLKLA--------- 651

Query: 745  HRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKE 804
             RL +A       I GT+PDSID AEDR+RF  ++K+L ++QP    A+SEA+A+ +A+E
Sbjct: 652  RRLEAAGAP----IIGTTPDSIDLAEDRDRFLNLVKKLDLKQPANRSARSEAEAMRLAEE 707

Query: 805  IGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDAL 864
            +G+P+VVRPSYVLGGRAMEIVY  E L  Y+  AV+V P+ PVL+D++L DAIE+DVDA+
Sbjct: 708  VGFPMVVRPSYVLGGRAMEIVYEPEDLQRYMTAAVKVSPDSPVLLDRFLEDAIELDVDAI 767

Query: 865  ADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLM 924
             D   +V IGGIMEHIEQAGVHSGDSAC +P  ++ +  LD +   T  LA+ L+V GLM
Sbjct: 768  CDGT-DVFIGGIMEHIEQAGVHSGDSACSLPPYSLGAEVLDEVRRQTAALARGLSVVGLM 826

Query: 925  NCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIP 984
            N Q+AI   G+VYLLE NPRASRTVPFVSKA G PLAK AA  M+G+SL +     E   
Sbjct: 827  NVQFAI-RGGEVYLLEVNPRASRTVPFVSKATGVPLAKIAARCMAGQSLAEQNVGAERKI 885

Query: 985  KHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTV 1044
             H +VKEAV PF KF   D LLGPEM+STGEVMG+  +F  AFAK+Q+A G  LP SGT 
Sbjct: 886  DHFAVKEAVFPFSKFPTVDPLLGPEMKSTGEVMGVGHTFGEAFAKSQLAGGVGLPESGTA 945

Query: 1045 FLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMV 1104
             +++ D  KPH  ++A+   + GF+IV+T GTA  +   G+A     K+ EGRPH  DM+
Sbjct: 946  LITVRDGDKPHAVKLARELSEAGFRIVATRGTAGAITEAGVACTVANKVKEGRPHIVDMI 1005

Query: 1105 ANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTV 1162
             NG+IQ++V T+ G    + +   +R   L YKV   TT++GA A+  A+   ++  V
Sbjct: 1006 KNGEIQLVVNTTEGKRAIE-ESRSIRITALRYKVAYFTTIAGAQASCTALTDGRTAQV 1062


>gi|395797967|ref|ZP_10477254.1| carbamoyl phosphate synthase large subunit [Pseudomonas sp. Ag1]
 gi|421140207|ref|ZP_15600227.1| carbamoyl phosphate synthase large subunit [Pseudomonas fluorescens
            BBc6R8]
 gi|395337959|gb|EJF69813.1| carbamoyl phosphate synthase large subunit [Pseudomonas sp. Ag1]
 gi|404508599|gb|EKA22549.1| carbamoyl phosphate synthase large subunit [Pseudomonas fluorescens
            BBc6R8]
          Length = 1073

 Score = 1251 bits (3238), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 625/1088 (57%), Positives = 802/1088 (73%), Gaps = 28/1088 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILILGAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPDMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  + V +++EKERPDALLPTMGGQTALN A+ L   G LEK+GVE+IGA  D 
Sbjct: 63   ATYIEPIKWQTVAKIIEKERPDALLPTMGGQTALNCALDLEREGVLEKFGVEMIGANADT 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  F +AMK+IG+  P SGI ++++E  ++   +G FP IIRP+FT+GGTGGGI
Sbjct: 123  IDKAEDRSRFDKAMKSIGLDCPRSGIAHSMEEANAVLERLG-FPCIIRPSFTMGGTGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEFE IC  GL  S T ++L+++SL+GWKEYE+EV+RD  DN +I+CSIEN DPMG
Sbjct: 182  AYNREEFEEICARGLDLSPTKELLIDESLIGWKEYEMEVVRDKKDNCIIVCSIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGVE GGSNVQF + P  G ++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQIMRNASLAVLREIGVETGGSNVQFGICPDTGRMVVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIA++AAKL++GY+LD++ N+IT   TPASFEPSIDYVVTK+PR
Sbjct: 302  PRVSRSSALASKATGFPIARIAAKLAIGYTLDELQNEITGGATPASFEPSIDYVVTKLPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            FAFEKFP ++  LTTQMKSVGE MA+GRTFQES QKALR LE G  G      ++LD   
Sbjct: 362  FAFEKFPKADARLTTQMKSVGEVMAIGRTFQESLQKALRGLEVGVCGLD----EKLDLSN 417

Query: 507  EQ----LKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLL 562
             +    LK  L VP  +R+  +  A + GM V++I  ++ ID WFL Q ++LI  E+ + 
Sbjct: 418  PESMSVLKRELTVPGAERIWYVADAFRAGMTVEDIFGMNMIDPWFLVQIEDLIKEEEKVK 477

Query: 563  TQSVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFE 622
            T  +S++ +D  + +KR+GFSD ++A     TEK +R  R  L + P YKRVDTCAAEF 
Sbjct: 478  TLGLSSIDRDLMFRLKRKGFSDMRLAKLLGVTEKNLRTHRHKLDIFPVYKRVDTCAAEFA 537

Query: 623  ANTPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIM 682
             +T YMYS+Y+ ECE+AP+ + K++ILGGGPNRIGQGIEFDYCC H + +L+  GYETIM
Sbjct: 538  TDTAYMYSTYEEECEAAPSGRDKIMILGGGPNRIGQGIEFDYCCVHAALALREDGYETIM 597

Query: 683  MNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYL 742
            +N NPETVSTDYDTSDRLYFEP+T+EDVL +  +E+P+G+IVQ+GGQTPLKL+       
Sbjct: 598  VNCNPETVSTDYDTSDRLYFEPVTLEDVLEICRVEKPKGVIVQYGGQTPLKLA------- 650

Query: 743  DEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIA 802
               R   A+G   V I GTSPD+ID AEDRERF  +++ L++ QP     +SE +A+  A
Sbjct: 651  ---RALEAAG---VPIIGTSPDAIDRAEDRERFQQMVERLNLRQPPNATVRSEDEAIRAA 704

Query: 803  KEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVD 862
             +IGYP+VVRPSYVLGGRAMEIVY ++ L  YL +AV+V  + PVL+D +L+ AIE+DVD
Sbjct: 705  SKIGYPLVVRPSYVLGGRAMEIVYEEDELKRYLRDAVKVSNDSPVLLDHFLNCAIEMDVD 764

Query: 863  ALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCG 922
            A+ D   +VVIG IM+HIEQAGVHSGDSAC +P  ++ +   D +     K+A  L V G
Sbjct: 765  AVCDGT-DVVIGAIMQHIEQAGVHSGDSACSLPPYSLPAHIQDEMREQVKKMALELGVVG 823

Query: 923  LMNCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEV 982
            LMN Q A+    D+Y++E NPRASRTVPFVSK IG  LA  AA VM+GK+L ++GFTKE+
Sbjct: 824  LMNVQLALQGE-DIYVIEVNPRASRTVPFVSKCIGVSLAMIAARVMAGKTLKEIGFTKEI 882

Query: 983  IPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSG 1042
            IP   SVKEAV PF KF G D +LGPEM+STGEVMG+  +F  AFAKAQ+ A + LP  G
Sbjct: 883  IPNFYSVKEAVFPFAKFPGVDPILGPEMKSTGEVMGVGDTFGEAFAKAQMGASEVLPTGG 942

Query: 1043 TVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGD 1102
            T F+S+ D  KP +  +A+  +++GF++V+T+GTA  +E  G+ V RV K+ EGRPH  D
Sbjct: 943  TAFISVRDDDKPLVAGVARDLINLGFEVVATAGTAKLIEAAGLKVRRVNKVTEGRPHVVD 1002

Query: 1103 MVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTV 1162
            M+ N ++ +++ T+ G      D   +RR  L +K+   TT++   A  EA++     TV
Sbjct: 1003 MIKNDEVTLIINTTEGRQ-SIADSYSIRRNALQHKIYCTTTIAAGEAICEALKFGPEKTV 1061

Query: 1163 TMTALQDF 1170
                LQD 
Sbjct: 1062 RR--LQDL 1067


>gi|30249625|ref|NP_841695.1| xarbamoyl-phosphate synthase [Nitrosomonas europaea ATCC 19718]
 gi|30138988|emb|CAD85572.1| Carbamoyl-phosphate synthase:Methylglyoxal synthase-like domain
            [Nitrosomonas europaea ATCC 19718]
          Length = 1065

 Score = 1251 bits (3238), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 626/1063 (58%), Positives = 787/1063 (74%), Gaps = 22/1063 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTDL+ ILI+GAGPIVIGQACEFDYSG QAC+AL+EEGY VILINSNPATIMTDP L D
Sbjct: 3    KRTDLKSILIIGAGPIVIGQACEFDYSGVQACRALREEGYRVILINSNPATIMTDPELTD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+T + VE+++E ERPDALLPTMGGQTALN A+ L   G LEKYGV LIGA  +A
Sbjct: 63   ATYIEPITWQAVEKIIEIERPDALLPTMGGQTALNCALDLVRHGVLEKYGVVLIGASREA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR+ FKQAM  IG+++  S + ++++E +     IG +P IIRP+FTLGG+GGGI
Sbjct: 123  IDKAEDREKFKQAMTRIGLQSARSAMAHSMEEAMQAQAMIG-YPAIIRPSFTLGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEF  IC+ GL AS T ++L+E+S++GWKEYE+EV+RD  DN +I+C+IENVDPMG
Sbjct: 182  AYNREEFIEICERGLEASPTRELLIEESVIGWKEYEMEVIRDKQDNCIIVCAIENVDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQR+RD SIA++REIGVE GGSNVQFA+NP +G ++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQRMRDASIAVLREIGVETGGSNVQFAINPENGNMLVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKK-TPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL++GY+L+++ NDI     PASFEP+IDYVVTK+PR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAIGYTLNELGNDIAGGIIPASFEPTIDYVVTKVPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            FAFEKFP +   LTTQMKSVGE MA+GRTFQES QKALR LE G  G     + E   D 
Sbjct: 362  FAFEKFPQANDRLTTQMKSVGEVMAIGRTFQESLQKALRGLESGVDG-----LDEKTTDI 416

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
            E +K  L  P P+R+  I  A +  +  DEIH L+ ID WFL Q ++LI  EQ L  + +
Sbjct: 417  EIIKAELGHPGPERLWYIADAFRCNIPFDEIHALTRIDSWFLVQIEDLIRQEQALSERRL 476

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
              + + + Y +KR GFSD+++A    +++ +VR +R   GV P YKRVDTCAAEF+ +T 
Sbjct: 477  EILDRRELYHLKRCGFSDQRLAALLGTSQDKVRARRHEQGVRPVYKRVDTCAAEFDTHTA 536

Query: 627  YMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSN 686
            YMYS+Y+ ECES PT  KK+++LGGGPNRIGQGIEFDYCC H + +L+  GYETIM+N N
Sbjct: 537  YMYSTYEEECESRPTDNKKIMVLGGGPNRIGQGIEFDYCCVHAALALREDGYETIMVNCN 596

Query: 687  PETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHR 746
            PETVSTDYD SDRLYFEPLT+EDVL +  +E+P G+IVQ+GGQTPLKL+    + L+ + 
Sbjct: 597  PETVSTDYDVSDRLYFEPLTLEDVLEIAAVEKPAGVIVQYGGQTPLKLA----RALETNG 652

Query: 747  LPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEIG 806
            +P         I GTSPD ID AEDRERF A+++ L ++QP    A++   ALA A +IG
Sbjct: 653  VP---------IIGTSPDMIDCAEDRERFQAMLQGLGLKQPSNFTARTAETALAAADKIG 703

Query: 807  YPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALAD 866
            YP+VVRPSYVLGGRAMEIV+    L  Y++ AV+V  + PVL+D YL++AIE+DVDA++D
Sbjct: 704  YPLVVRPSYVLGGRAMEIVHEARDLERYIQEAVKVSNDSPVLLDHYLNNAIEVDVDAISD 763

Query: 867  SCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNC 926
                V+IGGIMEHIEQAGVHSGDSAC +P  ++S+S  + +   T  +A  LNV GLMN 
Sbjct: 764  GKA-VLIGGIMEHIEQAGVHSGDSACSLPPFSLSASLQEELRRQTEAMAYALNVNGLMNI 822

Query: 927  QYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPKH 986
            Q+AI     VY+LE NPRASRT PFVSKA G  LAK AA  M G++L D G TKEV P H
Sbjct: 823  QFAIQDD-TVYVLEVNPRASRTAPFVSKATGLQLAKIAARCMVGRTLADQGVTKEVYPSH 881

Query: 987  VSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVFL 1046
             SVKEAV PF KF G D +LGPEM+STGEVMG+  +F  AF K+Q+AAG +LP+SG V +
Sbjct: 882  FSVKEAVFPFAKFSGVDTILGPEMKSTGEVMGVGKNFAEAFVKSQLAAGVQLPVSGNVLI 941

Query: 1047 SLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVAN 1106
            S+ D  K     IA   +++GF + +T GTA  L+  G+ V  V K+ EGRPH  DM+ N
Sbjct: 942  SVRDSDKLEAVSIAIKLVELGFSLYATRGTARTLQQAGLPVIAVNKVAEGRPHIVDMIKN 1001

Query: 1107 GQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALA 1149
            G+I +++ T +       D   +RR  L  ++   TT++GA A
Sbjct: 1002 GEIVLIINTVANKRSAVRDSYSIRRVALQARITYYTTIAGARA 1044


>gi|187735745|ref|YP_001877857.1| carbamoyl-phosphate synthase large subunit [Akkermansia muciniphila
            ATCC BAA-835]
 gi|187425797|gb|ACD05076.1| carbamoyl-phosphate synthase, large subunit [Akkermansia muciniphila
            ATCC BAA-835]
          Length = 1067

 Score = 1251 bits (3238), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 616/1084 (56%), Positives = 795/1084 (73%), Gaps = 25/1084 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            K T ++KIL++G+GPIVIGQ CEFDYSGTQACKAL+EEGYEV+L+NSNPATIMTDP  A 
Sbjct: 3    KDTSIKKILVIGSGPIVIGQGCEFDYSGTQACKALREEGYEVVLVNSNPATIMTDPETAP 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
            RTYI P+TPE VE+++ +E+PDALLPT+GGQTALN A+ L  SG LE+  V +IGA  +A
Sbjct: 63   RTYIEPITPEFVEKIIIREKPDALLPTLGGQTALNCAMELHRSGVLEREKVRMIGANANA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I + EDR+LFK+AM  IG+  P SGI +T++E   +A +IG FPLI+RPAFTLGG GGG+
Sbjct: 123  IDRGEDRNLFKEAMLRIGLDVPRSGIAHTMEEARRVAGDIGTFPLIVRPAFTLGGMGGGV 182

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYNK EFE IC  GL  S  S++L+E+SL+GWKE+E+EVMRD ADN V+ICSIEN+DPMG
Sbjct: 183  AYNKTEFEEICARGLDLSPVSEILIEESLIGWKEFEMEVMRDRADNCVVICSIENIDPMG 242

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAP QTLTD+EYQ +RD S A+IREIGVE GGSN+QFA+NP +G ++VIEMN
Sbjct: 243  VHTGDSITVAPIQTLTDREYQAMRDASFAVIREIGVETGGSNIQFAINPANGRMIVIEMN 302

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRF 447
            PRVSRSSALASKATGFPIAK+AAKL++GY+LD++ NDIT++TPA FEP+IDYVVTK+PRF
Sbjct: 303  PRVSRSSALASKATGFPIAKLAAKLAIGYTLDELRNDITRETPACFEPTIDYVVTKVPRF 362

Query: 448  AFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDWE 507
             FEKF  ++  LTT MKSVGEAMA+GRTF+ES QKALRSLE G  GWG           E
Sbjct: 363  TFEKFKQADEHLTTSMKSVGEAMAIGRTFKESLQKALRSLETGRWGWGFDAKAPQAPSAE 422

Query: 508  QLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSVS 567
            ++   L VP  +R+  I  A   G  +DE+ +L+ ID WFL Q ++        L ++  
Sbjct: 423  EITRKLAVPTAERIFWIQTAFSNGFSLDEVQQLTQIDPWFLAQMQD--------LAKAGD 474

Query: 568  NMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTPY 627
            ++ K D  E K+ GFSD+QIA A  +TE+ +R++RL  G++P Y+ VDTCAAEFEA TPY
Sbjct: 475  SLDKLDLREAKKLGFSDRQIALARGTTEENIRKERLEQGIVPGYRLVDTCAAEFEAYTPY 534

Query: 628  MYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSNP 687
             YS+Y  E E+  T +KK+LILGGGPNRIGQGIEFDYCC H S +L+  GYETI++NSNP
Sbjct: 535  FYSTYGDENEARETGRKKILILGGGPNRIGQGIEFDYCCVHASMALREMGYETIIVNSNP 594

Query: 688  ETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHRL 747
            ETVSTDYD+SD+L+FEPLT+EDVL++ + E+P+G+IVQFGGQTPL L+      L+ H +
Sbjct: 595  ETVSTDYDSSDKLFFEPLTLEDVLHICEQEKPDGVIVQFGGQTPLNLA----NALEAHGV 650

Query: 748  PSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEIGY 807
            P         I GTSP +ID AEDRE F+A++KEL ++Q + G A +  DA AIA  IGY
Sbjct: 651  P---------IIGTSPRAIDLAEDREHFSALLKELGLKQAEAGTATNVEDAAAIAARIGY 701

Query: 808  PVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALADS 867
            PV++RPS+VLGGR M IVY ++ L  Y+  AVE   ERPVLID++L +A+EIDVD +AD 
Sbjct: 702  PVLLRPSFVLGGRGMIIVYEEKELRRYMNEAVEASEERPVLIDRFLENAVEIDVDVIADR 761

Query: 868  CGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNCQ 927
                VIG IM+H+E AG+HSGDSA MIP   IS      I+  + +LA +LNVCGLMN Q
Sbjct: 762  -ERAVIGAIMQHVEPAGIHSGDSASMIPAMGISMKMHKEITRASKELASKLNVCGLMNIQ 820

Query: 928  YAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPKHV 987
            +A+     +Y++E NPRASRTVPFVSK+IG PLAK AA VM+GK+L +LGFT+E+ P++ 
Sbjct: 821  FAVKDE-QLYVIEVNPRASRTVPFVSKSIGKPLAKLAAQVMAGKTLAELGFTREITPEYY 879

Query: 988  SVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVFLS 1047
             VKEAV P+ +F G DV+LGPEM+STGEVMGID    IAFAK+Q++A   LP  G VF+S
Sbjct: 880  CVKEAVFPWGRFPGIDVVLGPEMKSTGEVMGIDPDPDIAFAKSQVSAFNPLPTEGKVFIS 939

Query: 1048 LNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEG-RPHAGDMVAN 1106
            +ND  K  +  +A+   D+GF + +T GT   L    I  ER  K++E  RP+  D + N
Sbjct: 940  VNDRDKERVLHMARQLADMGFTLCATRGTMIHLLQHDIECERAYKVNEARRPNIVDHIKN 999

Query: 1107 GQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTVTMTA 1166
            G I   +I + G    + D + +R   +A K    T ++ A A   AI +LK+  + +  
Sbjct: 1000 GDID-FIINTPGSHDARADDIIIRSSAIAAKTSYCTNLASAQACVNAIEALKNKNLQVCT 1058

Query: 1167 LQDF 1170
            +Q++
Sbjct: 1059 IQEY 1062



 Score =  245 bits (626), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 146/391 (37%), Positives = 227/391 (58%), Gaps = 21/391 (5%)

Query: 83  DQKLGKRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTD 142
           D+   + T  +KILILG GP  IGQ  EFDY    A  AL+E GYE I++NSNP T+ TD
Sbjct: 541 DENEARETGRKKILILGGGPNRIGQGIEFDYCCVHASMALREMGYETIIVNSNPETVSTD 600

Query: 143 PGLADRTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIG 202
              +D+ +  P+T E V  + E+E+PD ++   GGQT LNLA       ALE +GV +IG
Sbjct: 601 YDSSDKLFFEPLTLEDVLHICEQEKPDGVIVQFGGQTPLNLA------NALEAHGVPIIG 654

Query: 203 AKLDAIKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGG 262
               AI  AEDR+ F   +K +G+K   +G    +++  +IA  IG +P+++RP+F LGG
Sbjct: 655 TSPRAIDLAEDREHFSALLKELGLKQAEAGTATNVEDAAAIAARIG-YPVLLRPSFVLGG 713

Query: 263 TGGGIAYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIEN 322
            G  I Y ++E        + AS    VL+++ L    E +++V+ D  +  VI   +++
Sbjct: 714 RGMIIVYEEKELRRYMNEAVEASEERPVLIDRFLENAVEIDVDVIAD-RERAVIGAIMQH 772

Query: 323 VDPMGVHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVM 382
           V+P G+H+GDS ++ PA  ++ K ++ +   S  +  ++ V CG  N+QFAV   D ++ 
Sbjct: 773 VEPAGIHSGDSASMIPAMGISMKMHKEITRASKELASKLNV-CGLMNIQFAVK--DEQLY 829

Query: 383 VIEMNPRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKK-TPASFEPSIDYVV 441
           VIE+NPR SR+    SK+ G P+AK+AA++  G +L ++    T++ TP       +Y  
Sbjct: 830 VIEVNPRASRTVPFVSKSIGKPLAKLAAQVMAGKTLAEL--GFTREITP-------EYYC 880

Query: 442 TKIPRFAFEKFPGSEPLLTTQMKSVGEAMAL 472
            K   F + +FPG + +L  +MKS GE M +
Sbjct: 881 VKEAVFPWGRFPGIDVVLGPEMKSTGEVMGI 911


>gi|149174998|ref|ZP_01853622.1| carbamoyl-phosphate synthase (glutamine-hydrolyzing) large chain
            [Planctomyces maris DSM 8797]
 gi|148846335|gb|EDL60674.1| carbamoyl-phosphate synthase (glutamine-hydrolyzing) large chain
            [Planctomyces maris DSM 8797]
          Length = 1084

 Score = 1251 bits (3238), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 630/1099 (57%), Positives = 809/1099 (73%), Gaps = 35/1099 (3%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            +R D+RKILI+G+GPIVIGQACEFDYSGTQACKAL+E+GYEV+L+NSNPATIMTDP  A 
Sbjct: 3    RRDDIRKILIIGSGPIVIGQACEFDYSGTQACKALREDGYEVVLVNSNPATIMTDPETAH 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
            RTYI P+T + +++V+E E+PDALLPT+GGQT LN A+ LA  G L++ GVELIGAK   
Sbjct: 63   RTYIEPITWQYIQKVIEIEKPDALLPTLGGQTGLNAAMDLARRGILDQLGVELIGAKEAV 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAE RD FK+AM  IG+  P S + + ++E  +   +IG  P+IIR ++TLGGTGGG+
Sbjct: 123  IAKAESRDQFKEAMTKIGLDCPRSAVVHNMEEANAAVKDIG-LPIIIRASYTLGGTGGGV 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEF    ++GLA S  ++VL+E+S+LGWKEYE+EVMRD ADNVVIIC+IEN DPMG
Sbjct: 182  AYNREEFVEKVRSGLALSPVNEVLLEESILGWKEYEMEVMRDQADNVVIICAIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQR+RD +IA +REIGVE GGSNVQFAVNP  G + +IEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQRMRDATIACMREIGVETGGSNVQFAVNPDTGRMTIIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRF 447
            PRVSRSSALASKATGFPIAK+AAKL+VGY LD+I NDIT++T A FEP+IDYVVTKIPR+
Sbjct: 302  PRVSRSSALASKATGFPIAKIAAKLAVGYRLDEIRNDITRETFACFEPTIDYVVTKIPRW 361

Query: 448  AFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSG--------WGCSNV 499
             FEKFP ++P+LT QMKSVGE M++GRTF+ES QKALR LE G  G        WG +  
Sbjct: 362  TFEKFPDADPVLTVQMKSVGETMSIGRTFKESLQKALRGLEIGHFGLGGGKKDLWGTAKQ 421

Query: 500  KELDWDWEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQ 559
               D     ++  L VPN +R+  +  A K+GM  ++IHELS ID WFL   ++L+++E 
Sbjct: 422  PSKD----TIQSKLSVPNEERIFYVRYAFKQGMTTEQIHELSDIDPWFLNHIRQLVELED 477

Query: 560  FLLTQS-VSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCA 618
             + ++S + +M      + K+ G+SDKQ+AF   STE +VR+ R  LG+  ++K+VDTCA
Sbjct: 478  QIRSRSRLEDMDYTAMKQAKQSGYSDKQLAFWLDSTEMDVRQYRKGLGIEATFKQVDTCA 537

Query: 619  AEFEANTPYMYSSYDFECESA--PTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSA 676
            AEFEA TPY YS+Y+ E E+   P  K++++ILGGGPNRIGQGIEFDYCCC  SF+LQ  
Sbjct: 538  AEFEAFTPYFYSTYEQEDETPGNPDHKRRIMILGGGPNRIGQGIEFDYCCCQASFALQEL 597

Query: 677  GYETIMMNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSL 736
            G E+IM+NSNPETVSTDYDTSD L+FEPLT EDVLN+ D  +P+G+IVQFGGQTPL L+ 
Sbjct: 598  GIESIMVNSNPETVSTDYDTSDHLFFEPLTTEDVLNICDRMKPDGVIVQFGGQTPLNLA- 656

Query: 737  PIHQYLDEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEA 796
                     R   A+G   V I GTSP+ IDAAEDRERF AI+++L + QP  GIA    
Sbjct: 657  ---------RGLEAAG---VNIIGTSPEMIDAAEDRERFQAILEKLELHQPPNGIATDTE 704

Query: 797  DALAIAKEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDA 856
             A  +A +IGYP++VRPSYVLGGRAMEI Y +E+LV Y+  AV   P+ PVL+D++L DA
Sbjct: 705  SARNVASKIGYPILVRPSYVLGGRAMEICYDEESLVRYMNEAVNASPDHPVLVDRFLEDA 764

Query: 857  IEIDVDALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAK 916
            IE+DVDA++D     ++GG+MEHIE+AGVHSGDSAC++P  ++  S ++ I   T  LA+
Sbjct: 765  IEVDVDAISDGI-TTLVGGVMEHIEEAGVHSGDSACVLPPHSLPESVINEIKRATHALAR 823

Query: 917  RLNVCGLMNCQYAITTSGD---VYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSL 973
             L V GLMN Q+A+  + D   VY+LE NPRASRT PFVSKA G  L + AA VM+G SL
Sbjct: 824  ELKVKGLMNIQFAVKQTDDEYKVYILEVNPRASRTSPFVSKATGISLPRIAAKVMAGVSL 883

Query: 974  NDLGFTKEVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIA 1033
             +   T+E  PKH SVKE+V PF +F G D++LGPEMRSTGEVMGI   F +AFAK+Q+A
Sbjct: 884  LEQEITREPEPKHTSVKESVFPFSRFLGVDIILGPEMRSTGEVMGISDGFAMAFAKSQLA 943

Query: 1034 AGQKLPLSGTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKM 1093
            A   LP  GTVF+S+ D+ K  +   A+  +++GFKIVSTSGTA  L+  G+ V  + K+
Sbjct: 944  ASTSLPSEGTVFISMADVYKDMIIEPARRLIELGFKIVSTSGTARVLKEAGLEVATIKKL 1003

Query: 1094 HEGRPHAGDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEA 1153
             EGRP+  DM+AN ++Q +  T SG    + D  K+R   ++Y V  +TT+ G LA  +A
Sbjct: 1004 KEGRPNLLDMMANQEVQFIFNTPSGKG-SRTDEGKIRSASVSYGVTCVTTIPGCLAVVKA 1062

Query: 1154 IRSLKSN-TVTMTALQDFF 1171
            + +L  + T  + ALQD+ 
Sbjct: 1063 LEALAEDATPQVRALQDWM 1081



 Score =  231 bits (589), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 141/404 (34%), Positives = 223/404 (55%), Gaps = 19/404 (4%)

Query: 82  KDQKLGKRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMT 141
           +D+  G     R+I+ILG GP  IGQ  EFDY   QA  AL+E G E I++NSNP T+ T
Sbjct: 554 EDETPGNPDHKRRIMILGGGPNRIGQGIEFDYCCCQASFALQELGIESIMVNSNPETVST 613

Query: 142 DPGLADRTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELI 201
           D   +D  +  P+T E V  + ++ +PD ++   GGQT LNLA        LE  GV +I
Sbjct: 614 DYDTSDHLFFEPLTTEDVLNICDRMKPDGVIVQFGGQTPLNLA------RGLEAAGVNII 667

Query: 202 GAKLDAIKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLG 261
           G   + I  AEDR+ F+  ++ + +  PP+GI    +   ++A++IG +P+++RP++ LG
Sbjct: 668 GTSPEMIDAAEDRERFQAILEKLELHQPPNGIATDTESARNVASKIG-YPILVRPSYVLG 726

Query: 262 GTGGGIAYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIE 321
           G    I Y++E         + AS    VLV++ L    E +++ + D     ++   +E
Sbjct: 727 GRAMEICYDEESLVRYMNEAVNASPDHPVLVDRFLEDAIEVDVDAISD-GITTLVGGVME 785

Query: 322 NVDPMGVHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGE- 380
           +++  GVH+GDS  V P  +L +     ++  + A+ RE+ V+ G  N+QFAV   D E 
Sbjct: 786 HIEEAGVHSGDSACVLPPHSLPESVINEIKRATHALARELKVK-GLMNIQFAVKQTDDEY 844

Query: 381 -VMVIEMNPRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDY 439
            V ++E+NPR SR+S   SKATG  + ++AAK+  G SL  +  +IT+      EP   +
Sbjct: 845 KVYILEVNPRASRTSPFVSKATGISLPRIAAKVMAGVSL--LEQEITR------EPEPKH 896

Query: 440 VVTKIPRFAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKA 483
              K   F F +F G + +L  +M+S GE M +   F  +F K+
Sbjct: 897 TSVKESVFPFSRFLGVDIILGPEMRSTGEVMGISDGFAMAFAKS 940


>gi|422596748|ref|ZP_16671027.1| carbamoyl phosphate synthase large subunit [Pseudomonas syringae pv.
            lachrymans str. M301315]
 gi|330987044|gb|EGH85147.1| carbamoyl phosphate synthase large subunit [Pseudomonas syringae pv.
            lachrymans str. M301315]
          Length = 1073

 Score = 1251 bits (3238), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 627/1088 (57%), Positives = 799/1088 (73%), Gaps = 28/1088 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILILGAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPAMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  + V +++EKERPDALLPTMGGQTALN A+ L   G LEK+GVE+IGA  D 
Sbjct: 63   ATYIEPIKWQTVAKIIEKERPDALLPTMGGQTALNCALDLEREGVLEKFGVEMIGANADT 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  F +AMK+IG+  P SGI ++++E  ++  ++G FP IIRP+FT+GGTGGGI
Sbjct: 123  IDKAEDRSRFDKAMKSIGLACPRSGIAHSMEEANAVLEKLG-FPCIIRPSFTMGGTGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEFE IC  GL  S T ++L+++SL+GWKEYE+EV+RD  DN +I+CSIEN DPMG
Sbjct: 182  AYNREEFEEICARGLDLSPTKELLIDESLIGWKEYEMEVVRDKKDNCIIVCSIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ LR+ S+A++REIGVE GGSNVQF + P  G ++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQILRNASLAVLREIGVETGGSNVQFGICPDTGRMVVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIA++AAKL+VGY+LD++ N+IT  KTPASFEPSIDYVVTK+PR
Sbjct: 302  PRVSRSSALASKATGFPIARVAAKLAVGYTLDELSNEITGGKTPASFEPSIDYVVTKLPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            FAFEKF  ++  LTTQMKSVGE MA+GRTFQES QKALR LE G  G       +LD   
Sbjct: 362  FAFEKFAKADARLTTQMKSVGEVMAIGRTFQESLQKALRGLEVGVCGLD----PKLDLSH 417

Query: 507  EQ----LKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLL 562
             +    LK  L VP  +R+  +  A + GM V+EI  ++ ID WFL Q ++L+  E+ + 
Sbjct: 418  PESMSTLKRELTVPGAERIWYVADAFRAGMTVEEIFAMNMIDPWFLVQIEDLVKDEEKVK 477

Query: 563  TQSVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFE 622
            T  +S + +D  + +KR+GFSD ++A     TEK +R  R  L V P YKRVDTCAAEF 
Sbjct: 478  TLGLSAIDRDLMFRLKRKGFSDARLAKLVGVTEKNLRTHRHKLDVFPVYKRVDTCAAEFA 537

Query: 623  ANTPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIM 682
             +T Y+YS+Y+ ECE+ P+ + K++ILGGGPNRIGQGIEFDYCC H + +L+  GYETIM
Sbjct: 538  TDTAYLYSTYEEECEANPSTRDKIMILGGGPNRIGQGIEFDYCCVHAALALREDGYETIM 597

Query: 683  MNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYL 742
            +N NPETVSTDYDTSDRLYFEP+T+EDVL ++ +E+P+G+IVQ+GGQTPLKL+       
Sbjct: 598  VNCNPETVSTDYDTSDRLYFEPVTLEDVLEIVRVEKPKGVIVQYGGQTPLKLA------- 650

Query: 743  DEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIA 802
               R   A+G   V I GTSPD+ID AEDRERF  +++ L++ QP     +SE +A+  A
Sbjct: 651  ---RALEAAG---VPIIGTSPDAIDRAEDRERFQQMVERLNLRQPPNATVRSEDEAIRAA 704

Query: 803  KEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVD 862
             +IGYP+VVRPSYVLGGRAMEIVY ++ L  YL  AV+V  + PVL+D +L+ AIE+DVD
Sbjct: 705  AKIGYPLVVRPSYVLGGRAMEIVYQEDELKRYLREAVQVSNDSPVLLDHFLNCAIEMDVD 764

Query: 863  ALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCG 922
            A+ D   +VVIG IM+HIEQAGVHSGDSAC +P  ++ +   D +     K+A  L V G
Sbjct: 765  AVCDGT-DVVIGAIMQHIEQAGVHSGDSACSLPPYSLPAHIQDEMREQVKKMALELGVVG 823

Query: 923  LMNCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEV 982
            LMN Q A+    D+Y++E NPRASRTVPFVSK IG  LA  AA VM+GK+L +L FTKE+
Sbjct: 824  LMNVQLALQGE-DIYVIEVNPRASRTVPFVSKCIGVSLAMIAARVMAGKTLKELNFTKEI 882

Query: 983  IPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSG 1042
            IP   SVKEAV PF KF G D +LGPEM+STGEVMG+  +F  AFAKAQ+ A + LP  G
Sbjct: 883  IPNFYSVKEAVFPFAKFPGVDPILGPEMKSTGEVMGVGDTFGEAFAKAQMGASEVLPTGG 942

Query: 1043 TVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGD 1102
            T F+S+ D  KP +E +A+  +++GF+IV+T+ TA  +E  G+ V RV K+ EGRPH  D
Sbjct: 943  TAFISVRDDDKPLVEAVARDLINLGFEIVATAVTAKLIEAAGLKVRRVNKVTEGRPHVVD 1002

Query: 1103 MVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTV 1162
            M+ N ++ +++ T+ G      D   +RR  L +K+   TT++   A  EA++     TV
Sbjct: 1003 MIKNDEVTLIINTTEGRQ-SIADSYSIRRNALQHKIYCTTTIAAGEAICEALKFGPEKTV 1061

Query: 1163 TMTALQDF 1170
                LQD 
Sbjct: 1062 RR--LQDL 1067


>gi|15677690|ref|NP_274851.1| carbamoyl phosphate synthase large subunit [Neisseria meningitidis
            MC58]
 gi|385853910|ref|YP_005900424.1| carbamoyl-phosphate synthase large subunit [Neisseria meningitidis
            H44/76]
 gi|416198794|ref|ZP_11619161.1| carbamoyl-phosphate synthase, large subunit [Neisseria meningitidis
            CU385]
 gi|427826488|ref|ZP_18993538.1| carbamoyl-phosphate synthase large chain [Neisseria meningitidis
            H44/76]
 gi|433465834|ref|ZP_20423304.1| carbamoyl-phosphate synthase, large subunit [Neisseria meningitidis
            NM422]
 gi|433489029|ref|ZP_20446178.1| carbamoyl-phosphate synthase, large subunit [Neisseria meningitidis
            M13255]
 gi|433491207|ref|ZP_20448319.1| carbamoyl-phosphate synthase, large subunit [Neisseria meningitidis
            NM418]
 gi|433507841|ref|ZP_20464738.1| carbamoyl-phosphate synthase, large subunit [Neisseria meningitidis
            9757]
 gi|433510008|ref|ZP_20466865.1| carbamoyl-phosphate synthase, large subunit [Neisseria meningitidis
            12888]
 gi|433512071|ref|ZP_20468885.1| carbamoyl-phosphate synthase, large subunit [Neisseria meningitidis
            4119]
 gi|22095532|sp|Q9JXW8.1|CARB_NEIMB RecName: Full=Carbamoyl-phosphate synthase large chain; AltName:
            Full=Carbamoyl-phosphate synthetase ammonia chain
 gi|7227111|gb|AAF42189.1| carbamoyl-phosphate synthase, large subunit [Neisseria meningitidis
            MC58]
 gi|316985462|gb|EFV64409.1| carbamoyl-phosphate synthase large chain [Neisseria meningitidis
            H44/76]
 gi|325139516|gb|EGC62056.1| carbamoyl-phosphate synthase, large subunit [Neisseria meningitidis
            CU385]
 gi|325200914|gb|ADY96369.1| carbamoyl-phosphate synthase, large subunit [Neisseria meningitidis
            H44/76]
 gi|432200531|gb|ELK56621.1| carbamoyl-phosphate synthase, large subunit [Neisseria meningitidis
            NM422]
 gi|432221025|gb|ELK76840.1| carbamoyl-phosphate synthase, large subunit [Neisseria meningitidis
            M13255]
 gi|432225341|gb|ELK81084.1| carbamoyl-phosphate synthase, large subunit [Neisseria meningitidis
            NM418]
 gi|432239312|gb|ELK94868.1| carbamoyl-phosphate synthase, large subunit [Neisseria meningitidis
            9757]
 gi|432244946|gb|ELL00425.1| carbamoyl-phosphate synthase, large subunit [Neisseria meningitidis
            12888]
 gi|432245228|gb|ELL00699.1| carbamoyl-phosphate synthase, large subunit [Neisseria meningitidis
            4119]
          Length = 1071

 Score = 1251 bits (3238), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 623/1070 (58%), Positives = 795/1070 (74%), Gaps = 22/1070 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTDL+ ILI+GAGPIVIGQACEFDYSG QACKAL+EEGY+VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDLKSILIIGAGPIVIGQACEFDYSGAQACKALREEGYKVILVNSNPATIMTDPEMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  + VE+++ KERPDA+LPTMGGQTALN A+ LA +G L KY VELIGA  DA
Sbjct: 63   VTYIEPIMWQTVEKIIAKERPDAILPTMGGQTALNCALDLARNGVLAKYNVELIGATEDA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  FK+AM+ IG+  P S + +T++E ++   ++G FP +IRP+FT+GG+GGGI
Sbjct: 123  IDKAEDRGRFKEAMEKIGLSCPKSFVCHTMNEALAAQEQVG-FPTLIRPSFTMGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYNK+EF AIC+ G  AS T ++L+E+S+LGWKEYE+EV+RD  DN +IICSIEN DPMG
Sbjct: 182  AYNKDEFLAICERGFDASPTHELLIEQSVLGWKEYEMEVVRDKNDNCIIICSIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGV+ GGSNVQFAVNP +GE++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQIMRNASLAVLREIGVDTGGSNVQFAVNPANGEMIVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VG++LD++ NDIT  KTPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGFTLDELRNDITGGKTPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            FAFEKFP ++  LTTQMKSVGE MA+GRT QESFQKALR LE G  G+   +      D 
Sbjct: 362  FAFEKFPAADDRLTTQMKSVGEVMAMGRTIQESFQKALRGLETGLCGFNPRS-----EDK 416

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
             +++  L  P P+RM  +  A + G  ++EIHE+  ID WFL Q ++L+  E+ +    +
Sbjct: 417  AEIRRELANPGPERMLFVADAFRAGFTLEEIHEICAIDPWFLAQIEDLMKEEKAVSDGIL 476

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
            S++       +KR+GFSDK++A     +EKEVRE R +L + P YKRVDTCAAEF   T 
Sbjct: 477  SDLDFAALRRLKRKGFSDKRLAQLLNVSEKEVREHRYALKLHPVYKRVDTCAAEFATETA 536

Query: 627  YMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSN 686
            Y+YS+Y+ ECES P+ +KKV+ILGGGPNRIGQGIEFDYCC H + +L+ +G+ETIM+N N
Sbjct: 537  YLYSTYEEECESRPSDRKKVMILGGGPNRIGQGIEFDYCCVHAALALRESGFETIMVNCN 596

Query: 687  PETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHR 746
            PETVSTD+DTSDRLYFEPLT+EDVL ++  E P G+IV +GGQTPLKL+           
Sbjct: 597  PETVSTDFDTSDRLYFEPLTLEDVLEIVRTENPWGVIVHYGGQTPLKLA----------- 645

Query: 747  LPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEIG 806
              +A  +  V I GTS DSIDAAEDRERF  ++ +L + QP   IA +E +AL  A+EIG
Sbjct: 646  --NALVENGVNIIGTSADSIDAAEDRERFQKVLNDLGLRQPPNRIAHNEEEALVKAEEIG 703

Query: 807  YPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALAD 866
            YP+VVRPSYVLGGRAM++V++ E L  Y+  AV+V  + PVL+D +L++AIE+DVD ++D
Sbjct: 704  YPLVVRPSYVLGGRAMQVVHSAEELQKYMREAVQVSEDSPVLLDFFLNNAIEVDVDCVSD 763

Query: 867  SCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNC 926
               +VVIGGIM+H+EQAG+HSGDS C +P  ++S    D I   T  +A  L V GLMN 
Sbjct: 764  G-KDVVIGGIMQHVEQAGIHSGDSGCSLPPYSLSEEIQDEIRRQTKAMAYALGVVGLMNV 822

Query: 927  QYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPKH 986
            Q+A+   G V++LE NPRASRTVPFVSKA G PLAK  A  M+G SL + G  KEV+P  
Sbjct: 823  QFAV-QDGVVFVLEVNPRASRTVPFVSKATGVPLAKVGARCMAGISLKEQGVEKEVVPDF 881

Query: 987  VSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVFL 1046
             +VKEAV PF KF G D +LGPEMRSTGEVMG+  SF  A+ KAQ+ AG++L  +G +FL
Sbjct: 882  YAVKEAVFPFIKFPGVDTILGPEMRSTGEVMGVGASFGEAYYKAQLGAGERLNPTGKIFL 941

Query: 1047 SLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVAN 1106
            S+ +  K  + + AK F  +G+ I +T GTA +L   G+ V+ + K+ EGRPH GD + N
Sbjct: 942  SVREEDKERVIKTAKNFQVLGYGICATRGTAQYLTEHGLIVQTINKVPEGRPHIGDALKN 1001

Query: 1107 GQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRS 1156
            G+I ++V T S D     D   +R+  L  +VP  TT +G  A +E  +S
Sbjct: 1002 GEIALVVNTVSSDPQSVSDSHIIRQSALQQRVPQYTTTAGGEAMSEGAKS 1051


>gi|398855335|ref|ZP_10611831.1| carbamoyl-phosphate synthase, large subunit [Pseudomonas sp. GM80]
 gi|398232020|gb|EJN17999.1| carbamoyl-phosphate synthase, large subunit [Pseudomonas sp. GM80]
          Length = 1073

 Score = 1251 bits (3238), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 630/1088 (57%), Positives = 801/1088 (73%), Gaps = 28/1088 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILILGAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPDMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  + V +++EKERPDA+LPTMGGQTALN A+ L   G LEK+GVE+IGA  D 
Sbjct: 63   ATYIEPIKWQTVAKIIEKERPDAVLPTMGGQTALNCALDLEREGILEKFGVEMIGANADT 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  F +AMK+IG+  P SGI ++++E  ++   +G FP IIRP+FT+GGTGGGI
Sbjct: 123  IDKAEDRSRFDKAMKSIGLACPRSGIAHSMEEANAVLETLG-FPCIIRPSFTMGGTGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEFE IC  GL  S T ++L+++SL+GWKEYE+EV+RD  DN +I+CSIEN DPMG
Sbjct: 182  AYNREEFEEICARGLDLSPTKELLIDESLIGWKEYEMEVVRDKKDNCIIVCSIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ LR+ S+A++REIGVE GGSNVQF + P  G ++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQILRNASLAVLREIGVETGGSNVQFGICPDTGRMVVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT  KTPASFEPSIDYVVTK+PR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGYTLDELSNDITGGKTPASFEPSIDYVVTKLPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            FAFEKF  ++  LTTQMKSVGE MA+GRTFQES QKALR LE G  G      ++LD   
Sbjct: 362  FAFEKFAKADARLTTQMKSVGEVMAIGRTFQESLQKALRGLEVGVCGLD----EKLDLSN 417

Query: 507  EQ----LKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLL 562
             +    LK  L VP  +R+  +  A + GM V+EI  ++ ID WFL Q ++LI  E+ + 
Sbjct: 418  PESMSVLKRELTVPGAERIWYVADAFRAGMTVEEIFAMNMIDPWFLVQIEDLIKDEEKVK 477

Query: 563  TQSVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFE 622
            T  +S + +D  Y++KR+GFSD+++A     TEK +R  R  L V P YKRVDTCAAEF 
Sbjct: 478  TLGLSAIDRDVMYKLKRKGFSDQRLAKLLGVTEKNLRTHRHKLEVFPVYKRVDTCAAEFA 537

Query: 623  ANTPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIM 682
             +T Y+YS+Y+ ECE+AP+ + K++ILGGGPNRIGQGIEFDYCC H + +L+  GYETIM
Sbjct: 538  TDTAYLYSTYEEECEAAPSGRDKIMILGGGPNRIGQGIEFDYCCVHAALALREDGYETIM 597

Query: 683  MNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYL 742
            +N NPETVSTDYDTSDRLYFE +T+EDVL +  +E+P+G+IVQ+GGQTPLKL+       
Sbjct: 598  VNCNPETVSTDYDTSDRLYFESVTLEDVLEICRVEKPKGVIVQYGGQTPLKLA------- 650

Query: 743  DEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIA 802
               R   A+G   V I GTSPD+ID AEDRERF  +++ L++ QP     +SE +A+  A
Sbjct: 651  ---RALEAAG---VPIIGTSPDAIDRAEDRERFQQMVERLNLRQPPNATVRSEDEAIRAA 704

Query: 803  KEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVD 862
             +IGYP+VVRPSYVLGGRAMEIVY +E L  YL +AV+V  + PVL+D +L+ AIE+DVD
Sbjct: 705  SKIGYPLVVRPSYVLGGRAMEIVYEEEELKRYLRDAVKVSNDSPVLLDHFLNCAIEMDVD 764

Query: 863  ALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCG 922
            A+ D   +VVIG IM+HIEQAGVHSGDSAC +P  ++     D +     K+A  L V G
Sbjct: 765  AVCDG-KDVVIGAIMQHIEQAGVHSGDSACSLPPYSLPVHIQDEMREQVKKMALELGVVG 823

Query: 923  LMNCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEV 982
            LMN Q A+    D+Y++E NPRASRTVPFVSK IG  LA  AA VM+GK+L ++GFTKE+
Sbjct: 824  LMNVQLALQGE-DIYVIEVNPRASRTVPFVSKCIGVSLAMIAARVMAGKTLKEIGFTKEI 882

Query: 983  IPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSG 1042
            IP   SVKEAV PF KF G D +LGPEM+STGEVMG+  +F  AFAKAQ+ A + LP  G
Sbjct: 883  IPNFYSVKEAVFPFAKFPGVDPILGPEMKSTGEVMGVGDTFGEAFAKAQMGASEVLPTGG 942

Query: 1043 TVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGD 1102
            T F+S+ D  KP +  +A+  +++GF++V+T+GTA  +E  G+ V RV K+ EGRPH  D
Sbjct: 943  TAFISVRDDDKPLVAGVARDLINLGFEVVATAGTAKLIEAAGLKVRRVNKVTEGRPHVVD 1002

Query: 1103 MVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTV 1162
            M+ N ++ +++ T+ G      D   +RR  L +K+   TT++   A  EA++     TV
Sbjct: 1003 MIKNDEVTLIINTTEGRQ-SIADSYSIRRNALQHKIYCTTTIAAGEAICEALKFGPEKTV 1061

Query: 1163 TMTALQDF 1170
                LQD 
Sbjct: 1062 RR--LQDL 1067


>gi|257095280|ref|YP_003168921.1| carbamoyl-phosphate synthase large subunit [Candidatus Accumulibacter
            phosphatis clade IIA str. UW-1]
 gi|257047804|gb|ACV36992.1| carbamoyl-phosphate synthase, large subunit [Candidatus
            Accumulibacter phosphatis clade IIA str. UW-1]
          Length = 1068

 Score = 1251 bits (3238), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 634/1084 (58%), Positives = 809/1084 (74%), Gaps = 24/1084 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILI+GAGPIVIGQACEFDYSG QACKAL EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIKSILIIGAGPIVIGQACEFDYSGAQACKALLEEGYRVILVNSNPATIMTDPEMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+T ++VE+++ +ERPDALLPTMGGQTALN A+ LA  G LEK+GVE+IGA   A
Sbjct: 63   VTYIEPITWKVVEKIIARERPDALLPTMGGQTALNCALDLARHGVLEKFGVEMIGATRQA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR+ FK AM  IG+ +  S   ++++E + +   IG +P IIRP+FT+GG+GGGI
Sbjct: 123  IDKAEDREKFKTAMTGIGLASARSAAAHSMEEALQVQAMIG-YPAIIRPSFTMGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEF  ICK GL AS T ++L+E+SL+GWKE+E+EV+RD  DN +I+CSIEN+DPMG
Sbjct: 182  AYNQEEFVDICKRGLEASPTRELLIEESLIGWKEFEMEVVRDRNDNCIIVCSIENLDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ +RD S+A++REIGV+ GGSNVQFA+ P DG ++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQIMRDASVAVLREIGVDTGGSNVQFAICPSDGRMIVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITK-KTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT  KTPASFEPSIDYVVTK+PR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGYTLDELANDITGGKTPASFEPSIDYVVTKVPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            FAFEKFP ++  LTTQMKSVGE MA+GRTFQES QKALR LE G  G+      E   D 
Sbjct: 362  FAFEKFPEADSRLTTQMKSVGEVMAIGRTFQESLQKALRGLEVGVDGF-----DERSVDR 416

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
            E+++ +L    P+R+  I  A + GM +DEI  L+ ID WFL Q ++L    + + ++ +
Sbjct: 417  EEIEMALSEARPERLWYIADAFRIGMHLDEIQRLTAIDPWFLAQIEDLYTKAERIRSRPL 476

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
            +++++D+ + +KR GFSDK++A   ++T+  VRE+R  LGV P YKRVDTCAAEF  +T 
Sbjct: 477  ASLSRDEIWHLKRAGFSDKRLATLLRTTQTAVRERRHELGVRPVYKRVDTCAAEFATDTA 536

Query: 627  YMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSN 686
            YMYS+Y+ ECE+ P+ ++K+++LGGGPNRIGQGIEFDYCC H + +++  GYETIM+N N
Sbjct: 537  YMYSTYEEECEANPSNRQKIMVLGGGPNRIGQGIEFDYCCVHAALAMREDGYETIMVNCN 596

Query: 687  PETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHR 746
            PETVSTDYDTSDRLYFEPLT+EDVL ++ +E+P G+IVQ+GGQTPLKL+          R
Sbjct: 597  PETVSTDYDTSDRLYFEPLTLEDVLEIVAVEKPVGVIVQYGGQTPLKLA----------R 646

Query: 747  LPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEIG 806
               A+G   V I GTSPD IDAAEDRERF  ++++L + QP    A++E +AL +A EIG
Sbjct: 647  DLEANG---VPIIGTSPDRIDAAEDRERFQKLLQQLGLRQPANRTARTEPEALRLAAEIG 703

Query: 807  YPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALAD 866
            YP+VVRPSYVLGGRAMEIV+    L  Y+  AV+V  + PVL+D++L+DAIE+DVDAL+D
Sbjct: 704  YPLVVRPSYVLGGRAMEIVHDPRDLERYMREAVKVSNDSPVLLDRFLNDAIEVDVDALSD 763

Query: 867  SCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNC 926
                V+IGG+MEHIEQAGVHSGDSAC +P  ++S+   D +   T  +A+ L VCGLMN 
Sbjct: 764  G-EEVLIGGVMEHIEQAGVHSGDSACSLPPYSLSAELQDELRRQTRLMARGLKVCGLMNV 822

Query: 927  QYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPKH 986
            Q+AI  SG V++LE NPRASRTVPFVSKA G  LAK AA  M GKSL   G ++EVIP +
Sbjct: 823  QFAI-QSGVVFVLEVNPRASRTVPFVSKATGLQLAKIAARCMVGKSLASQGLSREVIPHY 881

Query: 987  VSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVFL 1046
             SVKEAV PF KF+G D +LGPEM+STGEVMGI +SF  AF K+Q+AA  +LP +G VF+
Sbjct: 882  FSVKEAVFPFVKFRGVDTILGPEMKSTGEVMGIGLSFSEAFVKSQMAASVRLPTAGQVFI 941

Query: 1047 SLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVAN 1106
            S+ +  KP    IA+     GF I++T GTA  +   GI V  V K+ EGRPH  DM+ N
Sbjct: 942  SVKESDKPKAVAIARDLRASGFTILATRGTAAAIAAAGITVTAVNKVTEGRPHVVDMIKN 1001

Query: 1107 GQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTVTMTA 1166
             +I +++ T         D   +R  GLA +V + TT+ GA A    IR+     + +  
Sbjct: 1002 HEIVLIINTVDEKRKAISDSRSIRTSGLAARVTIYTTIWGAEAATAGIRN--RGELVVYP 1059

Query: 1167 LQDF 1170
            LQD 
Sbjct: 1060 LQDL 1063


>gi|261378475|ref|ZP_05983048.1| carbamoyl-phosphate synthase, large subunit [Neisseria cinerea ATCC
            14685]
 gi|269145269|gb|EEZ71687.1| carbamoyl-phosphate synthase, large subunit [Neisseria cinerea ATCC
            14685]
          Length = 1071

 Score = 1251 bits (3237), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 623/1070 (58%), Positives = 795/1070 (74%), Gaps = 22/1070 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTDL+ ILI+GAGPIVIGQACEFDYSG QACKAL+EEGY+VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDLKSILIIGAGPIVIGQACEFDYSGAQACKALREEGYKVILVNSNPATIMTDPEMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  + VE+++ KERPDA+LPTMGGQTALN A+ LA +G L KY VELIGA  DA
Sbjct: 63   VTYIEPIMWQTVEKIIAKERPDAILPTMGGQTALNCALDLARNGVLAKYNVELIGATEDA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  FK+AM+ IG+  P S + +T++E ++   ++G FP +IRP+FT+GG+GGGI
Sbjct: 123  IDKAEDRGRFKEAMEKIGLSCPKSFVCHTMNEALAAQEQVG-FPTLIRPSFTMGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYNK+EF AIC+ G  AS T ++L+E+S+LGWKEYE+EV+RD ADN +IICSIEN DPMG
Sbjct: 182  AYNKDEFLAICERGFDASPTHELLIEQSVLGWKEYEMEVVRDKADNCIIICSIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGV+ GGSNVQFAVNP +GE++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQIMRNASLAVLREIGVDTGGSNVQFAVNPENGEMIVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VG++LD++ NDIT  +TPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGFTLDELRNDITGGRTPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            FAFEKFP ++  LTTQMKSVGE MA+GRT QESFQKALR LE G  G+   +      D 
Sbjct: 362  FAFEKFPAADDRLTTQMKSVGEVMAMGRTIQESFQKALRGLETGLCGFNPRS-----SDK 416

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
             +++  L  P P+RM  +  A + G  ++EIHE+  ID WFL Q ++L+  EQ +    +
Sbjct: 417  AEIRRELANPGPERMLFVADAFRAGFTLEEIHEICAIDPWFLAQIEDLVKEEQQVSAGCL 476

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
             ++       +KR+GFSDK+IA      EKEVRE R +L + P YKRVDTCAAEF   T 
Sbjct: 477  QDLDFAALRRLKRKGFSDKRIAQLLGVKEKEVREHRYTLDLHPVYKRVDTCAAEFATETA 536

Query: 627  YMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSN 686
            Y+YS+Y+ ECE+ P+ +KKV+ILGGGPNRIGQGIEFDYCC H + +L+ +G+ETIM+N N
Sbjct: 537  YLYSTYEEECEARPSDRKKVMILGGGPNRIGQGIEFDYCCVHAALALRESGFETIMVNCN 596

Query: 687  PETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHR 746
            PETVSTD+DTSDRLYFEPLT+EDVL ++  E P G+IV +GGQTPLKL+           
Sbjct: 597  PETVSTDFDTSDRLYFEPLTLEDVLEIVRTENPWGVIVHYGGQTPLKLA----------- 645

Query: 747  LPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEIG 806
              +A  +  V I GTS DSIDAAEDRERF  ++ +L + QP   IA +E +AL  A+EIG
Sbjct: 646  --NALVENGVNIIGTSADSIDAAEDRERFQKVLNDLGLRQPPNRIAHNEEEALVKAEEIG 703

Query: 807  YPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALAD 866
            YP+VVRPSYVLGGRAM++V++ E L  Y+  AV+V  + PVL+D +L++AIE+DVD ++D
Sbjct: 704  YPLVVRPSYVLGGRAMQVVHSAEELQKYMREAVQVSEDSPVLLDFFLNNAIEVDVDCVSD 763

Query: 867  SCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNC 926
               +VVIGGIM+H+EQAG+HSGDS C +P  ++S    D I   T  +A  L V GLMN 
Sbjct: 764  G-KDVVIGGIMQHVEQAGIHSGDSGCSLPPYSLSEEIQDEIRRQTKAMAYALGVVGLMNV 822

Query: 927  QYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPKH 986
            Q+A+   G V++LE NPRASRTVPFVSKA G PLAK  A  M+G SL + G  KEV+P  
Sbjct: 823  QFAV-QDGVVFVLEVNPRASRTVPFVSKATGVPLAKVGARCMAGISLQEQGVEKEVVPDF 881

Query: 987  VSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVFL 1046
             +VKEAV PF KF G D +LGPEMRSTGEVMG+  SF  A+ KAQ+ AG++L  +G +FL
Sbjct: 882  YAVKEAVFPFIKFPGVDTILGPEMRSTGEVMGVGASFGEAYYKAQLGAGERLNPTGKIFL 941

Query: 1047 SLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVAN 1106
            S+ +  K  + + AK F  +G+ I +T GTA +L  +G+ V+ + K+ EGRPH GD + N
Sbjct: 942  SVREEDKERVIKTAKNFQVLGYGICATRGTAQYLTEQGLIVQTINKVPEGRPHIGDALKN 1001

Query: 1107 GQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRS 1156
            G+I ++V T S D     D   +R+  L  +VP  TT +G  A +E  +S
Sbjct: 1002 GEIALVVNTVSSDPQSVSDSHIIRQSALQQRVPQYTTTAGGEAMSEGAKS 1051


>gi|121634229|ref|YP_974474.1| carbamoyl phosphate synthase large subunit [Neisseria meningitidis
            FAM18]
 gi|161869361|ref|YP_001598528.1| carbamoyl phosphate synthase large subunit [Neisseria meningitidis
            053442]
 gi|416179637|ref|ZP_11611073.1| carbamoyl-phosphate synthase, large subunit [Neisseria meningitidis
            M6190]
 gi|416193267|ref|ZP_11617106.1| carbamoyl-phosphate synthase, large subunit [Neisseria meningitidis
            ES14902]
 gi|421538824|ref|ZP_15984996.1| carbamoyl-phosphate synthase large chain [Neisseria meningitidis
            93003]
 gi|421557846|ref|ZP_16003743.1| carbamoyl-phosphate synthase large chain [Neisseria meningitidis
            80179]
 gi|433493209|ref|ZP_20450295.1| carbamoyl-phosphate synthase, large subunit [Neisseria meningitidis
            NM586]
 gi|433495325|ref|ZP_20452386.1| carbamoyl-phosphate synthase, large subunit [Neisseria meningitidis
            NM762]
 gi|433497458|ref|ZP_20454486.1| carbamoyl-phosphate synthase, large subunit [Neisseria meningitidis
            M7089]
 gi|433498013|ref|ZP_20455029.1| carbamoyl-phosphate synthase, large subunit [Neisseria meningitidis
            M7124]
 gi|433501513|ref|ZP_20458494.1| carbamoyl-phosphate synthase, large subunit [Neisseria meningitidis
            NM174]
 gi|433503556|ref|ZP_20460512.1| carbamoyl-phosphate synthase, large subunit [Neisseria meningitidis
            NM126]
 gi|120865935|emb|CAM09672.1| carbamoyl phosphate synthase large subunit [Neisseria meningitidis
            FAM18]
 gi|161594914|gb|ABX72574.1| carbamoyl phosphate synthase large subunit [Neisseria meningitidis
            053442]
 gi|325131499|gb|EGC54206.1| carbamoyl-phosphate synthase, large subunit [Neisseria meningitidis
            M6190]
 gi|325137545|gb|EGC60127.1| carbamoyl-phosphate synthase, large subunit [Neisseria meningitidis
            ES14902]
 gi|402315531|gb|EJU51094.1| carbamoyl-phosphate synthase large chain [Neisseria meningitidis
            93003]
 gi|402333565|gb|EJU68867.1| carbamoyl-phosphate synthase large chain [Neisseria meningitidis
            80179]
 gi|432226812|gb|ELK82535.1| carbamoyl-phosphate synthase, large subunit [Neisseria meningitidis
            NM586]
 gi|432227957|gb|ELK83659.1| carbamoyl-phosphate synthase, large subunit [Neisseria meningitidis
            NM762]
 gi|432232232|gb|ELK87882.1| carbamoyl-phosphate synthase, large subunit [Neisseria meningitidis
            M7089]
 gi|432233354|gb|ELK88982.1| carbamoyl-phosphate synthase, large subunit [Neisseria meningitidis
            NM174]
 gi|432236780|gb|ELK92384.1| carbamoyl-phosphate synthase, large subunit [Neisseria meningitidis
            M7124]
 gi|432239026|gb|ELK94586.1| carbamoyl-phosphate synthase, large subunit [Neisseria meningitidis
            NM126]
          Length = 1071

 Score = 1251 bits (3237), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 624/1070 (58%), Positives = 795/1070 (74%), Gaps = 22/1070 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTDL+ ILI+GAGPIVIGQACEFDYSG QACKAL+EEGY+VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDLKSILIIGAGPIVIGQACEFDYSGAQACKALREEGYKVILVNSNPATIMTDPEMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  + VE+++ KERPDA+LPTMGGQTALN A+ LA +G L KY VELIGA  DA
Sbjct: 63   VTYIEPIMWQTVEKIIAKERPDAILPTMGGQTALNCALDLARNGVLAKYNVELIGATEDA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  FK+AM+ IG+  P S + +T++E ++   ++G FP +IRP+FT+GG+GGGI
Sbjct: 123  IDKAEDRGRFKEAMEKIGLSCPKSFVCHTMNEALAAQEQVG-FPTLIRPSFTMGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYNK+EF AIC+ G  AS T ++L+E+S+LGWKEYE+EV+RD  DN +IICSIEN DPMG
Sbjct: 182  AYNKDEFLAICERGFDASPTHELLIEQSVLGWKEYEMEVVRDKNDNCIIICSIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGV+ GGSNVQFAVNP +GE++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQIMRNASLAVLREIGVDTGGSNVQFAVNPENGEMIVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VG+ LD++ NDIT  KTPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGFKLDELRNDITGGKTPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            FAFEKFP ++  LTTQMKSVGE MA+GRT QESFQKALR LE G  G+   +      D 
Sbjct: 362  FAFEKFPAADDRLTTQMKSVGEVMAMGRTIQESFQKALRGLETGLCGFNPRS-----SDK 416

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
             +++  L  P P+RM  +  A + G  ++EIHE+  ID WFL Q ++L+  E+ +    +
Sbjct: 417  AEIRRELANPGPERMLFVADAFRAGFTLEEIHEICAIDPWFLAQIEDLMKEEKAVSDGIL 476

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
            S++       +KR+GFSDK++A     +EKEVRE R +L + P YKRVDTCAAEF   T 
Sbjct: 477  SDLDFAALRRLKRKGFSDKRLAQLLNVSEKEVREHRYALKLHPVYKRVDTCAAEFATETA 536

Query: 627  YMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSN 686
            Y+YS+Y+ ECES P+ +KKV+ILGGGPNRIGQGIEFDYCC H + +L+ +G+ETIM+N N
Sbjct: 537  YLYSTYEEECESRPSDRKKVMILGGGPNRIGQGIEFDYCCVHAALALRESGFETIMVNCN 596

Query: 687  PETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHR 746
            PETVSTD+DTSDRLYFEPLT+EDVL ++  E P G+IV +GGQTPLKL+           
Sbjct: 597  PETVSTDFDTSDRLYFEPLTLEDVLEIVRTENPWGVIVHYGGQTPLKLA----------- 645

Query: 747  LPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEIG 806
              +A  +  V I GTS DSIDAAEDRERF  ++ +L + QP   IA +E +AL  A+EIG
Sbjct: 646  --NALVENGVNIIGTSADSIDAAEDRERFQKVLNDLGLRQPPNRIAHNEEEALVKAEEIG 703

Query: 807  YPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALAD 866
            YP+VVRPSYVLGGRAM+IV++ E L  Y+  AV+V  + PVL+D +L++AIE+DVD ++D
Sbjct: 704  YPLVVRPSYVLGGRAMQIVHSAEALQKYMREAVQVSEDSPVLLDFFLNNAIEVDVDCVSD 763

Query: 867  SCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNC 926
               +VVIGGIM+H+EQAG+HSGDS C +P  ++S    D I   T  +A  L V GLMN 
Sbjct: 764  G-KDVVIGGIMQHVEQAGIHSGDSGCSLPPYSLSEEIQDEIRRQTKAMAYALGVVGLMNV 822

Query: 927  QYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPKH 986
            Q+A+   G V++LE NPRASRTVPFVSKA G PLAK  A  M+G SL + G  KEV+P  
Sbjct: 823  QFAV-QDGVVFVLEVNPRASRTVPFVSKATGVPLAKVGARCMAGISLKEQGVEKEVVPDF 881

Query: 987  VSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVFL 1046
             +VKEAV PF KF G D +LGPEMRSTGEVMG+  SF  A+ KAQ+ AG++L  +G +FL
Sbjct: 882  YAVKEAVFPFIKFPGVDTILGPEMRSTGEVMGVGASFGEAYYKAQLGAGERLNPTGKIFL 941

Query: 1047 SLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVAN 1106
            S+ +  K  + + AK F  +G+ I +T GTA +L  +G+ V+ + K+ EGRPH GD + N
Sbjct: 942  SVREEDKERVIKTAKNFQVLGYGICATRGTAQYLTEQGLIVQTINKVPEGRPHIGDALKN 1001

Query: 1107 GQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRS 1156
            G+I ++V T S D     D   +R+  L  +VP  TT +G  A +E  +S
Sbjct: 1002 GEIALVVNTVSSDPQSVSDSHIIRQSALQQRVPQYTTTAGGEAMSEGAKS 1051


>gi|345870094|ref|ZP_08822049.1| carbamoyl-phosphate synthase, large subunit [Thiorhodococcus drewsii
            AZ1]
 gi|343922481|gb|EGV33183.1| carbamoyl-phosphate synthase, large subunit [Thiorhodococcus drewsii
            AZ1]
          Length = 1069

 Score = 1251 bits (3237), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 634/1087 (58%), Positives = 798/1087 (73%), Gaps = 25/1087 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILI+G+GPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIKSILIIGSGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+T   +  ++EKERP+ALLPTMGGQTALN A+ L   G LE++GVELIGA  +A
Sbjct: 63   ATYIEPVTWRALAAIIEKERPEALLPTMGGQTALNCALDLVREGVLEQFGVELIGASREA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDRDLF+QAM+ IG+  P S + ++L+E   +   IG FP IIRP+FT+GG+GGGI
Sbjct: 123  IDKAEDRDLFRQAMRKIGLDMPRSAVAHSLEEANQVQASIG-FPSIIRPSFTMGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEFE IC+ GL  S T ++L+E+S+LGWKEYE+EV+RD  DN +IICSIEN+DPMG
Sbjct: 182  AYNQEEFEEICRRGLDLSPTRELLIEESVLGWKEYEMEVVRDRVDNCIIICSIENLDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ +R+ ++A++REIGV+ GGSNVQFA++P  G +++IEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQIMRNAALAVLREIGVDTGGSNVQFAIDPETGRMIIIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT   TPASFEP+IDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGYTLDELRNDITGGTTPASFEPTIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKEL--DW 504
            FAFEKFP ++  LTTQMKSVGE MA+GRTFQES QKALR LE     +G   + +L    
Sbjct: 362  FAFEKFPLADARLTTQMKSVGEVMAIGRTFQESLQKALRGLE--IDRYGLDEIVDLADPE 419

Query: 505  DWEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQ 564
              E+++  +R    +R+  +  A + GM +DEIHELS ID WFL Q ++LI  E  L   
Sbjct: 420  AKEKIRLEVRQTGAERLFYVADAFRAGMTLDEIHELSRIDPWFLAQIEDLIASEGALRAG 479

Query: 565  SVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEAN 624
              + +T +    +KR+GFSD++IA      E E+RE R   G+ P YKRVDTCAAEF ++
Sbjct: 480  GRAGLTVESLRALKRKGFSDRRIAGLLDIKEVELRELRHEWGLHPVYKRVDTCAAEFASS 539

Query: 625  TPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMN 684
            T YMYS+Y+ ECES P+ ++K+++LGGGPNRIGQGIEFDYCC H +F+++  G+ETIM+N
Sbjct: 540  TAYMYSTYEEECESEPSDRRKIMVLGGGPNRIGQGIEFDYCCVHAAFAMRDDGFETIMVN 599

Query: 685  SNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDE 744
             NPETVSTDYDTSDRLYFEPLT+EDVL ++  E+P G+IVQ+GGQTPLKL+         
Sbjct: 600  CNPETVSTDYDTSDRLYFEPLTLEDVLEIVAKEKPFGVIVQYGGQTPLKLA--------- 650

Query: 745  HRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKE 804
             R   A+G   V I GT+PDSID AEDRERF  +I+EL + QP    A+SE++A+  A  
Sbjct: 651  -RSLEAAG---VPIIGTTPDSIDLAEDRERFQQLIQELGLRQPPNATARSESEAIERAAA 706

Query: 805  IGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDAL 864
            IGYP+VVRPSYVLGGRAMEIVY +  L  Y+  AV V  E PVL+D++L DAIEIDVDA+
Sbjct: 707  IGYPLVVRPSYVLGGRAMEIVYEEAELNRYMREAVRVSNESPVLLDRFLDDAIEIDVDAI 766

Query: 865  ADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLM 924
             D   +V+IGGIMEHIEQAGVHSGDSAC +P  T+     D +     KLA+ LNV GLM
Sbjct: 767  CDG-HDVLIGGIMEHIEQAGVHSGDSACSLPPYTLPPLIQDRMREQMTKLARALNVVGLM 825

Query: 925  NCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIP 984
            N Q+A+ +   V++LE NPRASRTVPFVSKAIG PLAK AA  M+GK+L + G T+EV P
Sbjct: 826  NAQFAVKSDA-VFILEVNPRASRTVPFVSKAIGIPLAKVAARCMAGKTLVEQGLTREVRP 884

Query: 985  KHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPL-SGT 1043
            KH  VKEAV PF KF G D +LGPEM+STGEVMG+  +F  A+AK+Q  AG  LP   G 
Sbjct: 885  KHYFVKEAVFPFVKFPGVDSVLGPEMKSTGEVMGVGETFGEAYAKSQEGAGTMLPRKGGR 944

Query: 1044 VFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDM 1103
              LS+ +  K  L  +A+  LD GF + +T GTA  +   G+    V K+ EGRPH  DM
Sbjct: 945  ALLSVREADKARLIHVARDLLDFGFTLYATHGTAAAVRAAGLECTGVNKVAEGRPHIVDM 1004

Query: 1104 VANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTVT 1163
            + N ++  +V T+ G +    D   +RR  L  KV   TT+SGA A   A++ L  + V+
Sbjct: 1005 IKNNEVGFIVNTTEG-AQAIADSAAIRRAALQNKVTYTTTISGAEATCLALKQL--DIVS 1061

Query: 1164 MTALQDF 1170
            +  LQD 
Sbjct: 1062 VNRLQDL 1068


>gi|433537342|ref|ZP_20493838.1| carbamoyl-phosphate synthase, large subunit [Neisseria meningitidis
            77221]
 gi|432271765|gb|ELL26887.1| carbamoyl-phosphate synthase, large subunit [Neisseria meningitidis
            77221]
          Length = 1071

 Score = 1251 bits (3237), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 624/1070 (58%), Positives = 795/1070 (74%), Gaps = 22/1070 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTDL+ ILI+GAGPIVIGQACEFDYSGTQACKAL+EEGY+VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDLKSILIIGAGPIVIGQACEFDYSGTQACKALREEGYKVILVNSNPATIMTDPEMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  + VE+++ KERPDA+LPTMGGQTALN A+ LA +G L KY VELIGA  DA
Sbjct: 63   VTYIEPIMWQTVEKIIAKERPDAILPTMGGQTALNCALDLARNGVLAKYNVELIGATEDA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  FK+AM+ IG+  P S + +T++E ++   ++G FP +IRP+FT+GG+GGGI
Sbjct: 123  IDKAEDRGRFKEAMEKIGLSCPKSFVCHTMNEALAAQEQVG-FPTLIRPSFTMGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYNK+EF AIC+ G  AS T ++L+E+S+LGWKEYE+EV+RD  DN +IICSIEN DPMG
Sbjct: 182  AYNKDEFLAICERGFDASPTHELLIEQSVLGWKEYEMEVVRDKNDNCIIICSIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGV+ GGSNVQFAVNP +GE++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQIMRNASLAVLREIGVDTGGSNVQFAVNPKNGEMIVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VG++LD++ NDIT  +TPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGFTLDELRNDITGGRTPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            FAFEKFP ++  LTTQMKSVGE MA+GRT QESFQKALR LE G  G+   +      D 
Sbjct: 362  FAFEKFPAADDRLTTQMKSVGEVMAMGRTIQESFQKALRGLETGLCGFNPRS-----EDK 416

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
             +++  L  P P+RM  +  A + G  ++EIHE+  ID WFL Q ++L+  E+ +    +
Sbjct: 417  AEIRRELANPGPERMLFVADAFRAGFTLEEIHEICAIDPWFLAQIEDLVKEEKAVSDGIL 476

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
            S++       +KR+GFSDK+IA      EKEVRE R +L + P YKRVDTCAAEF   T 
Sbjct: 477  SDLDFAALRRLKRKGFSDKRIAQLLGVKEKEVREHRYALKLHPVYKRVDTCAAEFATETA 536

Query: 627  YMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSN 686
            Y+YS+Y+ ECE+ P+ +KKV+ILGGGPNRIGQGIEFDYCC H + +L+ +G+ETIM+N N
Sbjct: 537  YLYSTYEEECEARPSDRKKVMILGGGPNRIGQGIEFDYCCVHAALALRESGFETIMVNCN 596

Query: 687  PETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHR 746
            PETVSTD+DTSDRLYFEPLT+EDVL ++  E P G+IV +GGQTPLKL+           
Sbjct: 597  PETVSTDFDTSDRLYFEPLTLEDVLEIVRTENPWGVIVHYGGQTPLKLA----------- 645

Query: 747  LPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEIG 806
              +A  +  V I GTS DSIDAAEDRERF  ++ +L + QP   IA +E +AL  A+EIG
Sbjct: 646  --NALVENGVNIIGTSADSIDAAEDRERFQKVLNDLGLRQPPNRIAHNEEEALVKAEEIG 703

Query: 807  YPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALAD 866
            YP+VVRPSYVLGGRAM+IV++ E L  Y+  AV+V  + PVL+D +L++AIE+DVD ++D
Sbjct: 704  YPLVVRPSYVLGGRAMQIVHSAEALQKYMREAVQVSEDSPVLLDFFLNNAIEVDVDCVSD 763

Query: 867  SCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNC 926
               +VVIGGIM+H+EQAG+HSGDS C +P  ++S    D I   T  +A  L V GLMN 
Sbjct: 764  G-KDVVIGGIMQHVEQAGIHSGDSGCSLPPYSLSEEIQDEIRRQTKAMAYALGVVGLMNV 822

Query: 927  QYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPKH 986
            Q+A+   G V++LE NPRASRTVPFVSKA G PLAK  A  M+G SL + G  KEV+P  
Sbjct: 823  QFAV-QDGVVFVLEVNPRASRTVPFVSKATGVPLAKVGARCMAGISLKEQGVEKEVVPDF 881

Query: 987  VSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVFL 1046
             +VKEAV PF KF G D +LGPEMRSTGEVMG+  SF  A+ KAQ+ AG++L  +G +FL
Sbjct: 882  YAVKEAVFPFIKFPGVDTILGPEMRSTGEVMGVGASFGEAYYKAQLGAGERLNPTGKIFL 941

Query: 1047 SLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVAN 1106
            S+ +  K  + + AK F  +G+ I +T GTA +L   G+ V+ + K+ EGRPH GD + N
Sbjct: 942  SVREEDKERVIKTAKNFQALGYGICATRGTAQYLTEHGLIVQTINKVPEGRPHIGDALKN 1001

Query: 1107 GQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRS 1156
            G+I ++V T S D     D   +R+  L  +VP  TT +G  A +E  +S
Sbjct: 1002 GEIALVVNTVSSDPQSVSDSHIIRQSALQQRVPQYTTTAGGEAMSEGAKS 1051


>gi|330504839|ref|YP_004381708.1| carbamoyl phosphate synthase large subunit [Pseudomonas mendocina
            NK-01]
 gi|328919125|gb|AEB59956.1| carbamoyl phosphate synthase large subunit [Pseudomonas mendocina
            NK-01]
          Length = 1073

 Score = 1251 bits (3237), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 624/1088 (57%), Positives = 805/1088 (73%), Gaps = 28/1088 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILILGAGPIVIGQACEFDYSG QACKALKEEG+ VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIKSILILGAGPIVIGQACEFDYSGAQACKALKEEGFRVILVNSNPATIMTDPAMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+    V +++EKERPDALLPTMGGQTALN A+ L   G LEK+GVE+IGA  D 
Sbjct: 63   ATYIEPIKWATVAKIIEKERPDALLPTMGGQTALNCALDLERHGVLEKFGVEMIGANADT 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  F +AMK IG+  P SGI ++++E   +   +G FP IIRP+FT+GGTGGGI
Sbjct: 123  IDKAEDRSRFDKAMKDIGLACPRSGIAHSMEEAYGVLEMVG-FPCIIRPSFTMGGTGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEFE IC  GL  S T+++L+++SL+GWKEYE+EV+RD  DN +I+CSIEN DPMG
Sbjct: 182  AYNREEFEEICARGLDLSPTNELLIDESLIGWKEYEMEVVRDKKDNCIIVCSIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGVE GGSNVQF + P  G ++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQIMRNASLAVLREIGVETGGSNVQFGICPNTGRMVVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT  +TPASFEP+IDYVVTK+PR
Sbjct: 302  PRVSRSSALASKATGFPIAKIAAKLAVGYTLDELSNDITGGRTPASFEPAIDYVVTKVPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            FAFEKFP ++  LTTQMKSVGE MA+GRTFQES QKALR LE G +G+      +LD + 
Sbjct: 362  FAFEKFPKADARLTTQMKSVGEVMAIGRTFQESVQKALRGLEVGVAGFD----PKLDLND 417

Query: 507  EQLKYSLR----VPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLL 562
             + + +LR    VP+ DR+  +  A + G  V E+ EL+ ID+WFL Q ++LI  E  + 
Sbjct: 418  PEAESTLRRELTVPSADRIWYVADAFRAGKTVAEVFELTRIDEWFLVQIEDLIKDEATVQ 477

Query: 563  TQSVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFE 622
            T  +S +  D  +++KR+GFSD ++A     +EK +R  R  L V+P YKRVDTCAAEF 
Sbjct: 478  TLGLSAIDYDLMFKLKRKGFSDARLAKLLGVSEKSLRAHRHKLKVLPVYKRVDTCAAEFA 537

Query: 623  ANTPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIM 682
             +T YMYS+Y+ ECE+ P+ + K++ILGGGPNRIGQGIEFDYCC H + +++  G+ETIM
Sbjct: 538  TDTAYMYSTYEEECEANPSGRDKIMILGGGPNRIGQGIEFDYCCVHAALAMREDGFETIM 597

Query: 683  MNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYL 742
            +N NPETVSTDYDTSDRLYFEP+T+EDVL ++ +E+P+G+IVQ+GGQTPLK    I + L
Sbjct: 598  VNCNPETVSTDYDTSDRLYFEPVTLEDVLEIVRVEQPKGVIVQYGGQTPLK----ICRAL 653

Query: 743  DEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIA 802
            +E  +P         I GTSP++ID AEDRERF  +++ L++ QP    A+SE +ALA++
Sbjct: 654  EEAGVP---------IIGTSPEAIDRAEDRERFQQMVQRLNLRQPANATARSEDEALALS 704

Query: 803  KEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVD 862
            K IGYP+VVRPSYVLGGRAMEIVY +E L  Y+  AV+V  + PVL+D++L+ AIE+DVD
Sbjct: 705  KNIGYPMVVRPSYVLGGRAMEIVYQEEELKRYMREAVKVSNDSPVLLDRFLNCAIEVDVD 764

Query: 863  ALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCG 922
            A+ D    VVIG IM+HIEQAGVHSGDSAC +P  ++ +   D I     K+A  L V G
Sbjct: 765  AVCDG-ETVVIGAIMQHIEQAGVHSGDSACSLPPYSLPAHIQDEIREQVKKMALELGVIG 823

Query: 923  LMNCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEV 982
            LMN Q A+    D+Y++E NPRASRTVPFVSK +G  LAK AA VM+GK+L ++G+T+E+
Sbjct: 824  LMNVQMAVQGE-DIYVIEVNPRASRTVPFVSKCVGESLAKVAARVMAGKTLAEVGYTQEI 882

Query: 983  IPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSG 1042
            IP   SVKEAV PF KF G D +LGPEM+STGEVMG+  SF  AFAKAQ+ A + LP SG
Sbjct: 883  IPPFFSVKEAVFPFAKFPGVDPILGPEMKSTGEVMGVGDSFGEAFAKAQLGASEILPNSG 942

Query: 1043 TVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGD 1102
              F+S+ +  K    ++A+  + +GF++V+T+GTA  +E  G+ V RV K+ EGRPH  D
Sbjct: 943  CAFISVREDDKAEAVQVARDLVSLGFEVVATAGTAKVIEAAGLPVRRVNKVTEGRPHVVD 1002

Query: 1103 MVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTV 1162
            M+ N ++ +++ T+ G      D   +RR  L +K+   TT++   A  EA++     TV
Sbjct: 1003 MIKNDEVTLIINTTEGRQ-SIADSYSIRRNALQHKIYCTTTIAAGQAVCEALKFGPEKTV 1061

Query: 1163 TMTALQDF 1170
                LQD 
Sbjct: 1062 RR--LQDL 1067


>gi|416164373|ref|ZP_11607204.1| carbamoyl-phosphate synthase, large subunit [Neisseria meningitidis
            N1568]
 gi|433474177|ref|ZP_20431531.1| carbamoyl-phosphate synthase, large subunit [Neisseria meningitidis
            97021]
 gi|433482599|ref|ZP_20439854.1| carbamoyl-phosphate synthase, large subunit [Neisseria meningitidis
            2006087]
 gi|433484607|ref|ZP_20441826.1| carbamoyl-phosphate synthase, large subunit [Neisseria meningitidis
            2002038]
 gi|433486851|ref|ZP_20444040.1| carbamoyl-phosphate synthase, large subunit [Neisseria meningitidis
            97014]
 gi|325127537|gb|EGC50462.1| carbamoyl-phosphate synthase, large subunit [Neisseria meningitidis
            N1568]
 gi|432207495|gb|ELK63484.1| carbamoyl-phosphate synthase, large subunit [Neisseria meningitidis
            97021]
 gi|432214619|gb|ELK70516.1| carbamoyl-phosphate synthase, large subunit [Neisseria meningitidis
            2006087]
 gi|432219693|gb|ELK75529.1| carbamoyl-phosphate synthase, large subunit [Neisseria meningitidis
            2002038]
 gi|432220450|gb|ELK76270.1| carbamoyl-phosphate synthase, large subunit [Neisseria meningitidis
            97014]
          Length = 1071

 Score = 1251 bits (3237), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 624/1070 (58%), Positives = 794/1070 (74%), Gaps = 22/1070 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTDL+ ILI+GAGPIVIGQACEFDYSG QACKAL+EEGY+VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDLKSILIIGAGPIVIGQACEFDYSGAQACKALREEGYKVILVNSNPATIMTDPEMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  + VE+++ KERPDA+LPTMGGQTALN A+ LA +G L KY VELIGA  DA
Sbjct: 63   VTYIEPIMWQTVEKIIAKERPDAILPTMGGQTALNCALDLARNGVLAKYNVELIGATEDA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  FK+AM+ IG+  P S + +T++E ++   ++G FP +IRP+FT+GG+GGGI
Sbjct: 123  IDKAEDRGRFKEAMEKIGLSCPKSFVCHTMNEALAAQEQVG-FPTLIRPSFTMGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYNK+EF AIC+ G  AS T ++L+E+S+LGWKEYE+EV+RD  DN +IICSIEN DPMG
Sbjct: 182  AYNKDEFLAICERGFDASPTHELLIEQSVLGWKEYEMEVVRDKNDNCIIICSIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGV+ GGSNVQFAVNP +GE++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQIMRNSSLAVLREIGVDTGGSNVQFAVNPENGEMIVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VG+ LD++ NDIT  KTPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGFKLDELRNDITGGKTPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            FAFEKFP ++  LTTQMKSVGE MA+GRT QESFQKALR LE G  G+   +      D 
Sbjct: 362  FAFEKFPAADDRLTTQMKSVGEVMAMGRTIQESFQKALRGLETGLCGFNPRS-----SDK 416

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
             +++  L  P P+RM  +  A + G  ++EIHE+  ID WFL Q ++L+  E+ +    +
Sbjct: 417  AEIRRELANPGPERMLFVADAFRAGFTLEEIHEICAIDPWFLAQIEDLMKEEKAVSDGIL 476

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
            S++       +KR+GFSDK++A     +EKEVRE R +L + P YKRVDTCAAEF   T 
Sbjct: 477  SDLDFAALRRLKRKGFSDKRLAQLLNVSEKEVREHRYALKLHPVYKRVDTCAAEFATETA 536

Query: 627  YMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSN 686
            Y+YS+Y+ ECES P+ +KKV+ILGGGPNRIGQGIEFDYCC H + +L+ +G+ETIM+N N
Sbjct: 537  YLYSTYEEECESRPSDRKKVMILGGGPNRIGQGIEFDYCCVHAALALRESGFETIMVNCN 596

Query: 687  PETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHR 746
            PETVSTD+DTSDRLYFEPLT+EDVL ++  E P G+IV +GGQTPLKL+           
Sbjct: 597  PETVSTDFDTSDRLYFEPLTLEDVLEIVRTENPWGVIVHYGGQTPLKLA----------- 645

Query: 747  LPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEIG 806
              +A  +  V I GTS DSIDAAEDRERF  ++ +L + QP   IA +E +AL  A+EIG
Sbjct: 646  --NALVENGVNIIGTSADSIDAAEDRERFQKVLNDLGLRQPPNRIAHNEEEALVKAEEIG 703

Query: 807  YPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALAD 866
            YP+VVRPSYVLGGRAM+IV++ E L  Y+  AV+V  + PVL+D +L++AIE+DVD ++D
Sbjct: 704  YPLVVRPSYVLGGRAMQIVHSAEELQKYMREAVQVSEDSPVLLDFFLNNAIEVDVDCVSD 763

Query: 867  SCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNC 926
               +VVIGGIM+H+EQAG+HSGDS C +P  ++S    D I   T  +A  L V GLMN 
Sbjct: 764  G-KDVVIGGIMQHVEQAGIHSGDSGCSLPPYSLSEEIQDEIRRQTKAMAYALGVVGLMNV 822

Query: 927  QYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPKH 986
            Q+A+   G V++LE NPRASRTVPFVSKA G PLAK  A  M+G SL + G  KEV+P  
Sbjct: 823  QFAV-QDGVVFVLEVNPRASRTVPFVSKATGVPLAKVGARCMAGISLKEQGVEKEVVPDF 881

Query: 987  VSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVFL 1046
             +VKEAV PF KF G D +LGPEMRSTGEVMG+  SF  A+ KAQ+ AG++L  +G +FL
Sbjct: 882  YAVKEAVFPFIKFPGVDTILGPEMRSTGEVMGVGASFGEAYYKAQLGAGERLNPTGKIFL 941

Query: 1047 SLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVAN 1106
            S+ +  K  + + AK F  +G+ I +T GTA +L   G+ V+ + K+ EGRPH GD + N
Sbjct: 942  SVREEDKERVIKTAKNFQVLGYGICATRGTAQYLTEHGLIVQTINKVPEGRPHIGDALKN 1001

Query: 1107 GQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRS 1156
            G+I ++V T S D     D   +R+  L  +VP  TT +G  A +E  +S
Sbjct: 1002 GEIALVVNTVSSDPQSVSDSHIIRQSALQQRVPQYTTTAGGEAMSEGAKS 1051


>gi|291613525|ref|YP_003523682.1| carbamoyl-phosphate synthase, large subunit [Sideroxydans
            lithotrophicus ES-1]
 gi|291583637|gb|ADE11295.1| carbamoyl-phosphate synthase, large subunit [Sideroxydans
            lithotrophicus ES-1]
          Length = 1072

 Score = 1251 bits (3237), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 628/1075 (58%), Positives = 790/1075 (73%), Gaps = 26/1075 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILI+GAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIKSILIIGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPNMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+T ++VE+++ KE+PDA+LPTMGGQTALN A+ LA+ G LEKY VE+IGA  DA
Sbjct: 63   ATYIEPITWQMVEKIIAKEKPDAILPTMGGQTALNCALDLAKHGVLEKYNVEMIGASRDA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I  AEDR+ FKQAM  IG+ +  S I ++++E + +   +G FP IIRP+FT+GG+GGGI
Sbjct: 123  IDMAEDREKFKQAMTRIGLASARSAIAHSMEEALQVQQVMG-FPTIIRPSFTMGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEF  IC+ GL AS T ++L+E+SLLGWKEYE+EV+RD  DN +IICSIEN+DPMG
Sbjct: 182  AYNREEFVEICERGLEASPTRELLIEESLLGWKEYEMEVVRDRNDNCIIICSIENLDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ +RD S+A++REIGVE GGSNVQF++NP DG ++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQIMRDASLAVLREIGVETGGSNVQFSINPDDGRMVVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT   TPASFEP+IDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGYTLDELKNDITGGATPASFEPTIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            FAFEKFP +   LTTQMKSVGE MA+GRTFQESFQKALR LE G +G      +      
Sbjct: 362  FAFEKFPQANDRLTTQMKSVGEVMAIGRTFQESFQKALRGLEVGVNGLDTKYTER----- 416

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
            E +   +  P PDR+ A+  A + GM V+E+  +S ID WFL Q  +LI  EQ L  +++
Sbjct: 417  EAIVSEMGNPGPDRIWAVGDAFRLGMSVEEVFSVSKIDPWFLVQIADLIRQEQALAGRTL 476

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
             +++ D    +KR GF+D ++A      ++ VR  R +LGV P +KRVDTCAAEF  NT 
Sbjct: 477  ESLSADHLRTLKRSGFADARLAKLLGIDDESVRAYRHALGVRPVFKRVDTCAAEFATNTA 536

Query: 627  YMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSN 686
            YMYS+Y+ ECES PT  KK+++LGGGPNRIGQGIEFDYCC H + +++  GYETIM+N N
Sbjct: 537  YMYSTYEEECESLPTSNKKIMVLGGGPNRIGQGIEFDYCCVHAALAMREDGYETIMLNCN 596

Query: 687  PETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHR 746
            PETVSTDYDTSDRLYFEPLT+EDVL V+ +E+P G+IVQ+GGQTPLKL+         H 
Sbjct: 597  PETVSTDYDTSDRLYFEPLTLEDVLEVVAVEKPIGVIVQYGGQTPLKLA---------HG 647

Query: 747  LPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEIG 806
            L        V I GT+PD ID AEDR RF A+++EL+++QP    A + AD +A A EIG
Sbjct: 648  LAKNG----VPIIGTTPDMIDMAEDRARFQAMLRELNLKQPPNRTASNVADGVAGAAEIG 703

Query: 807  YPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVD---PER-PVLIDKYLSDAIEIDVD 862
            YP+V+RPS VLGGRAMEI++    L  Y+ +A E+    PER P+L+D++L+DAIE+DVD
Sbjct: 704  YPLVMRPSNVLGGRAMEIIHAQSDLERYMRDAEEMSKTYPERMPILLDRFLNDAIEVDVD 763

Query: 863  ALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCG 922
            A++D    V+IGGIMEHIEQAGVHSGDSAC +P  ++S+   D +   T+ +AK LNV G
Sbjct: 764  AVSDG-KQVIIGGIMEHIEQAGVHSGDSACSLPPYSLSAKLQDELRRQTVAMAKSLNVVG 822

Query: 923  LMNCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEV 982
            LMN Q+AI     VY+LE NPRASRTVP+VSKA   PLAK AA  M+G++L   G TKEV
Sbjct: 823  LMNVQFAIQGE-TVYVLEVNPRASRTVPYVSKATSVPLAKIAARCMAGQTLAQQGVTKEV 881

Query: 983  IPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSG 1042
            IP + SVKEAV PF KF G D +LGPEM+STGEVMG+  SF  AF K+Q+AA  KLP SG
Sbjct: 882  IPPYYSVKEAVFPFIKFPGVDTILGPEMKSTGEVMGVGDSFAEAFVKSQLAASVKLPKSG 941

Query: 1043 TVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGD 1102
             VF+S+ +  K     +A+    +GF I++T GT   +   G+ V  V K+ EGRPH  D
Sbjct: 942  KVFISVREEDKHGAAEVARTLKQLGFTILATRGTGSVITAAGVEVTVVNKVAEGRPHIVD 1001

Query: 1103 MVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSL 1157
            M+ NG I ++V T         D   +R   L  +V   TT++GA A    ++ L
Sbjct: 1002 MIKNGDISLIVNTVDSKPSVMRDSYSIRHAALQGRVTYYTTLAGARAACLGMQHL 1056


>gi|268600552|ref|ZP_06134719.1| carbamoyl-phosphate synthase subunit large [Neisseria gonorrhoeae
            PID18]
 gi|291044644|ref|ZP_06570353.1| carbamoyl phosphate synthase large subunit [Neisseria gonorrhoeae
            DGI2]
 gi|268584683|gb|EEZ49359.1| carbamoyl-phosphate synthase subunit large [Neisseria gonorrhoeae
            PID18]
 gi|291011538|gb|EFE03534.1| carbamoyl phosphate synthase large subunit [Neisseria gonorrhoeae
            DGI2]
          Length = 1071

 Score = 1251 bits (3237), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 623/1070 (58%), Positives = 794/1070 (74%), Gaps = 22/1070 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTDL+ ILI+GAGPIVIGQACEFDYSG QACKAL+EEGY+VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDLKSILIIGAGPIVIGQACEFDYSGAQACKALREEGYKVILVNSNPATIMTDPEMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  + VE+++ KERPDA+LPTMGGQTALN A+ LA +G L KY VELIGA  DA
Sbjct: 63   VTYIEPIMWQTVEKIIAKERPDAILPTMGGQTALNCALDLARNGVLAKYNVELIGATEDA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  FK+AM+ IG+  P S + +T++E ++   ++G FP +IRP+FT+GG+GGGI
Sbjct: 123  IDKAEDRGRFKEAMEKIGLSCPKSFVCHTMNEALAAQEQVG-FPTLIRPSFTMGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYNK+EF AIC+ G  AS T ++L+E+S+LGWKEYE+EV+RD ADN +IICSIEN DPMG
Sbjct: 182  AYNKDEFLAICERGFDASPTHELLIEQSVLGWKEYEMEVVRDKADNCIIICSIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGV+ GGSNVQFAVNP +GE++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQIMRNASLAVLREIGVDTGGSNVQFAVNPENGEMIVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VG++LD++ NDIT  +TPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGFTLDELRNDITGGRTPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            FAFEKFP ++  LTTQMKSVGE MA+GRT QESFQKALR LE G  G+   +      D 
Sbjct: 362  FAFEKFPAADDRLTTQMKSVGEVMAMGRTIQESFQKALRGLETGLCGFNPRS-----EDK 416

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
             +++  L  P P+RM  +  A + G   +EIHE+  ID WFL Q ++L+  E+ +    +
Sbjct: 417  AEIRRELANPGPERMLFVADAFRAGFTPEEIHEICAIDPWFLAQIEDLMKEEKSVSDGQL 476

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
             ++       +KR+GFSDK++A     +EKEVRE R +L + P YKRVDTCAAEF   T 
Sbjct: 477  QDLDYAALRRLKRKGFSDKRLAQLLNVSEKEVREHRYALKLHPVYKRVDTCAAEFATETA 536

Query: 627  YMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSN 686
            Y+YS+Y+ ECES P+ +KKV+ILGGGPNRIGQGIEFDYCC H + +L+ +G+ETIM+N N
Sbjct: 537  YLYSTYEEECESRPSDRKKVMILGGGPNRIGQGIEFDYCCVHAALALRESGFETIMVNCN 596

Query: 687  PETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHR 746
            PETVSTD+DTSDRLYFEPLT+EDVL ++  E P G+IV +GGQTPLKL+           
Sbjct: 597  PETVSTDFDTSDRLYFEPLTLEDVLEIVRTENPWGVIVHYGGQTPLKLA----------- 645

Query: 747  LPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEIG 806
              +A  +  V I GTS DSIDAAEDRERF  ++ +L + QP   IA +E +AL  A+EIG
Sbjct: 646  --NALVENGVNIIGTSADSIDAAEDRERFQKVLNDLGLRQPPNRIAHNEEEALVKAEEIG 703

Query: 807  YPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALAD 866
            YP+VVRPSYVLGGRAM+IV++ E L  Y+  AV+V  + PVL+D +L++AIE+DVD ++D
Sbjct: 704  YPLVVRPSYVLGGRAMQIVHSAEALQKYMREAVQVSEDSPVLLDFFLNNAIEVDVDCVSD 763

Query: 867  SCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNC 926
               +VVIGGIM+H+EQAG+HSGDS C +P  ++S    D I   T  +A  L V GLMN 
Sbjct: 764  G-KDVVIGGIMQHVEQAGIHSGDSGCSLPPYSLSEEIQDEIRRQTKAMAYALGVVGLMNV 822

Query: 927  QYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPKH 986
            Q+A+   G V++LE NPRASRTVPFVSKA G PLAK  A  M+G SL + G  KEV+P  
Sbjct: 823  QFAV-QDGVVFVLEVNPRASRTVPFVSKATGVPLAKVGARCMAGISLKEQGVEKEVVPDF 881

Query: 987  VSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVFL 1046
             +VKEAV PF KF G D +LGPEMRSTGEVMG+  SF  A+ KAQ+ AG++L  +G +FL
Sbjct: 882  YAVKEAVFPFIKFPGVDTILGPEMRSTGEVMGVGASFGEAYYKAQLGAGERLNPTGKIFL 941

Query: 1047 SLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVAN 1106
            S+ +  K  + + AK F  +G+ I +T GTA +L   G+ V+ + K+ EGRPH GD + N
Sbjct: 942  SVREEDKERVIKTAKNFQALGYGICATRGTAQYLTEHGLIVQAINKVPEGRPHIGDALKN 1001

Query: 1107 GQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRS 1156
            G+I ++V T S D     D   +R+  L  +VP  TT +G  A +E  +S
Sbjct: 1002 GEIALVVNTVSSDPQSVSDSHIIRQSALQQRVPQYTTTAGGEAMSEGAKS 1051


>gi|337279397|ref|YP_004618869.1| carbamoyl-phosphate synthase large chain [Ramlibacter tataouinensis
            TTB310]
 gi|334730474|gb|AEG92850.1| candidate carbamoyl-phosphate synthase large chain
            (Carbamoyl-phosphate synthase (ammonia)) [Ramlibacter
            tataouinensis TTB310]
          Length = 1084

 Score = 1251 bits (3237), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 635/1085 (58%), Positives = 799/1085 (73%), Gaps = 35/1085 (3%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILI+GAGPIVIGQACEFDYSG QACKAL+EEGY+VILINSNPATIMTDP  AD
Sbjct: 3    KRTDIKSILIIGAGPIVIGQACEFDYSGVQACKALREEGYKVILINSNPATIMTDPATAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+T + VE+++ KE+PDA+LPTMGGQTALN A+ L   G L ++GVELIGA   A
Sbjct: 63   VTYIEPITWQTVEKIIAKEKPDAILPTMGGQTALNCALDLWRHGVLNRHGVELIGATPQA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  FK+AM  IG+ +  SGI +++DE  ++   +G FP +IRP+FTLGGTGGGI
Sbjct: 123  IDKAEDRQKFKEAMTRIGLGSARSGIAHSMDEAWAVQKSVG-FPTVIRPSFTLGGTGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN EEFE ICK GL AS T+++L+E+SLLGWKE+E+EV+RD ADN +I+CSIEN+DPMG
Sbjct: 182  AYNAEEFEVICKRGLEASPTNELLIEESLLGWKEFEMEVVRDRADNCIIVCSIENLDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGV+ GGSNVQF++NP DG ++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQIMRNASLAVLREIGVDTGGSNVQFSINPQDGRMVVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ N+IT   TPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGYTLDELRNEITGGATPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            FAFEKFP ++  LTTQMKSVGE MA+GRTFQESFQKALR LE G  G     + E   D 
Sbjct: 362  FAFEKFPQADSRLTTQMKSVGEVMAMGRTFQESFQKALRGLEVGVDG-----MNEKTQDR 416

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFL--LT- 563
            E L+  L  P P+R+  +  A   G+ VDE++EL+ IDKWFL Q +E++ +E  L  +T 
Sbjct: 417  EVLEKELGEPGPERIWYVGDAFAMGLSVDEVYELTRIDKWFLVQIEEIVKIELELDQITA 476

Query: 564  ----QSVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAA 619
                ++++++       +KR+GFSD+++A   K+T+K VRE+R  L V P YKRVDTCAA
Sbjct: 477  DKGGKALASLDAATLRLLKRKGFSDRRLAKLLKTTDKAVREQRKKLNVRPVYKRVDTCAA 536

Query: 620  EFEANTPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYE 679
            EF  NT YMYS+Y+ ECE+ PT +KK+++LGGGPNRIGQGIEFDYCC H + +L+  GYE
Sbjct: 537  EFATNTAYMYSTYEDECEAEPTSRKKIMVLGGGPNRIGQGIEFDYCCVHAALALREDGYE 596

Query: 680  TIMMNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIH 739
            TIM+N NPETVSTDYDTSDRLYFEPLT+EDVL ++D E+P G+IVQ+GGQTPLKL+L + 
Sbjct: 597  TIMVNCNPETVSTDYDTSDRLYFEPLTLEDVLEIVDKEKPTGVIVQYGGQTPLKLALGLE 656

Query: 740  QYLDEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADAL 799
                      A G   V I GTSPD IDAAEDRERF  ++ +L + QP    A++EA AL
Sbjct: 657  ----------AEG---VPIIGTSPDMIDAAEDRERFQKLLHQLGLRQPPNATARTEAQAL 703

Query: 800  AIAKEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEI 859
              A  +GYP+VVRPSYVLGGRAMEIV+    L  Y+  AV+V  + PVL+D++L+DAIE 
Sbjct: 704  EKAAALGYPLVVRPSYVLGGRAMEIVHEQRDLERYMREAVKVSNDSPVLLDRFLNDAIEC 763

Query: 860  DVDALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLN 919
            DVD ++D   +  IGG+MEHIEQAGVHSGDSAC +P  ++S + +D +   T  +AK LN
Sbjct: 764  DVDCISDG-KDTFIGGVMEHIEQAGVHSGDSACSLPPYSLSKATVDELKRQTAAMAKALN 822

Query: 920  VCGLMNCQYAITTSGD---VYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDL 976
            V GLMN Q+AI  SG    +++LE NPRASRTVP+VSKA G  LAK AA  M G+SL   
Sbjct: 823  VVGLMNVQFAIQESGGQDVIFVLEVNPRASRTVPYVSKATGIQLAKVAARCMVGQSLESQ 882

Query: 977  GFTKEVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQ 1036
            G  +EV P + SVKEAV PF KF G D +LGPEM+STGEVMG+  +F  AF K+Q+ AG 
Sbjct: 883  GIRREVTPPYFSVKEAVFPFVKFPGVDTILGPEMKSTGEVMGVGKTFGEAFVKSQLGAGT 942

Query: 1037 KLPLS----GTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLK 1092
            KLP        VFL++ +  KP    +AK    +GF+IV+T GTA  +   GIA + V K
Sbjct: 943  KLPRPTDRVKKVFLTVKNSDKPRTVAVAKELAAMGFEIVATKGTAAAISAAGIACQTVNK 1002

Query: 1093 MHEGRPHAGDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAE 1152
            + EGRPH  DM+ N +I M+V T         D   +R   L  +V   TT++GA A  E
Sbjct: 1003 VAEGRPHVVDMIKNNEICMVVNTVEERRNAIADSRAIRTSSLLARVTTFTTIAGAEAAVE 1062

Query: 1153 AIRSL 1157
             ++ +
Sbjct: 1063 GMKYM 1067



 Score =  242 bits (618), Expect = 8e-61,   Method: Compositional matrix adjust.
 Identities = 151/432 (34%), Positives = 238/432 (55%), Gaps = 28/432 (6%)

Query: 61  VRASSAKIDS-SAELSNGAA----SSKDQKLGKRTDLRKILILGAGPIVIGQACEFDYSG 115
           VR    ++D+ +AE +   A    + +D+   + T  +KI++LG GP  IGQ  EFDY  
Sbjct: 524 VRPVYKRVDTCAAEFATNTAYMYSTYEDECEAEPTSRKKIMVLGGGPNRIGQGIEFDYCC 583

Query: 116 TQACKALKEEGYEVILINSNPATIMTDPGLADRTYITPMTPELVEQVLEKERPDALLPTM 175
             A  AL+E+GYE I++N NP T+ TD   +DR Y  P+T E V ++++KE+P  ++   
Sbjct: 584 VHAALALREDGYETIMVNCNPETVSTDYDTSDRLYFEPLTLEDVLEIVDKEKPTGVIVQY 643

Query: 176 GGQTALNLAVALAESGALEKYGVELIGAKLDAIKKAEDRDLFKQAMKTIGVKTPPSGIGN 235
           GGQT L LA+       LE  GV +IG   D I  AEDR+ F++ +  +G++ PP+    
Sbjct: 644 GGQTPLKLAL------GLEAEGVPIIGTSPDMIDAAEDRERFQKLLHQLGLRQPPNATAR 697

Query: 236 TLDECISIANEIGEFPLIIRPAFTLGGTGGGIAYNKEEFEAICKAGLAASLTSQVLVEKS 295
           T  + +  A  +G +PL++RP++ LGG    I + + + E   +  +  S  S VL+++ 
Sbjct: 698 TEAQALEKAAALG-YPLVVRPSYVLGGRAMEIVHEQRDLERYMREAVKVSNDSPVLLDRF 756

Query: 296 LLGWKEYELEVMRDLADNVVIICSIENVDPMGVHTGDSITVAPAQTLTDKEYQRLRDYSI 355
           L    E +++ + D  D   I   +E+++  GVH+GDS    P  +L+      L+  + 
Sbjct: 757 LNDAIECDVDCISDGKDT-FIGGVMEHIEQAGVHSGDSACSLPPYSLSKATVDELKRQTA 815

Query: 356 AIIREIGVECGGSNVQFAVNPVDGE--VMVIEMNPRVSRSSALASKATGFPIAKMAAKLS 413
           A+ + + V  G  NVQFA+    G+  + V+E+NPR SR+    SKATG  +AK+AA+  
Sbjct: 816 AMAKALNV-VGLMNVQFAIQESGGQDVIFVLEVNPRASRTVPYVSKATGIQLAKVAARCM 874

Query: 414 VGYSLDQ--IPNDITKKTPASFEPSIDYVVTKIPRFAFEKFPGSEPLLTTQMKSVGEAMA 471
           VG SL+   I  ++T            Y   K   F F KFPG + +L  +MKS GE M 
Sbjct: 875 VGQSLESQGIRREVTPP----------YFSVKEAVFPFVKFPGVDTILGPEMKSTGEVMG 924

Query: 472 LGRTFQESFQKA 483
           +G+TF E+F K+
Sbjct: 925 VGKTFGEAFVKS 936


>gi|421551018|ref|ZP_15997019.1| carbamoyl-phosphate synthase large chain [Neisseria meningitidis
            69166]
 gi|421561880|ref|ZP_16007717.1| carbamoyl-phosphate synthase, large subunit [Neisseria meningitidis
            NM2657]
 gi|433472084|ref|ZP_20429462.1| carbamoyl-phosphate synthase, large subunit [Neisseria meningitidis
            68094]
 gi|433478406|ref|ZP_20435715.1| carbamoyl-phosphate synthase, large subunit [Neisseria meningitidis
            70012]
 gi|433526907|ref|ZP_20483529.1| carbamoyl-phosphate synthase, large subunit [Neisseria meningitidis
            69096]
 gi|433539590|ref|ZP_20496057.1| carbamoyl-phosphate synthase, large subunit [Neisseria meningitidis
            70030]
 gi|254671009|emb|CBA07784.1| carbamoyl-phosphate synthase large chain [Neisseria meningitidis
            alpha153]
 gi|402329555|gb|EJU64916.1| carbamoyl-phosphate synthase large chain [Neisseria meningitidis
            69166]
 gi|402336265|gb|EJU71526.1| carbamoyl-phosphate synthase, large subunit [Neisseria meningitidis
            NM2657]
 gi|432206710|gb|ELK62711.1| carbamoyl-phosphate synthase, large subunit [Neisseria meningitidis
            68094]
 gi|432213300|gb|ELK69222.1| carbamoyl-phosphate synthase, large subunit [Neisseria meningitidis
            70012]
 gi|432258960|gb|ELL14240.1| carbamoyl-phosphate synthase, large subunit [Neisseria meningitidis
            69096]
 gi|432271610|gb|ELL26733.1| carbamoyl-phosphate synthase, large subunit [Neisseria meningitidis
            70030]
          Length = 1071

 Score = 1251 bits (3237), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 624/1070 (58%), Positives = 794/1070 (74%), Gaps = 22/1070 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTDL+ ILI+GAGPIVIGQACEFDYSG QACKAL+EEGY+VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDLKSILIIGAGPIVIGQACEFDYSGAQACKALREEGYKVILVNSNPATIMTDPEMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  + VE+++ KERPDA+LPTMGGQTALN A+ LA +G L KY VELIGA  DA
Sbjct: 63   VTYIEPIMWQTVEKIIAKERPDAILPTMGGQTALNCALDLARNGVLAKYNVELIGATEDA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  FK+AM+ IG+  P S + +T++E ++   ++G FP +IRP+FT+GG+GGGI
Sbjct: 123  IDKAEDRGRFKEAMEKIGLSCPKSFVCHTMNEALAAQEQVG-FPTLIRPSFTMGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYNK+EF AIC+ G  AS T ++L+E+S+LGWKEYE+EV+RD  DN +IICSIEN DPMG
Sbjct: 182  AYNKDEFLAICERGFDASPTHELLIEQSVLGWKEYEMEVVRDKNDNCIIICSIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGV+ GGSNVQFAVNP +GE++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQIMRNASLAVLREIGVDTGGSNVQFAVNPENGEMIVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VG+ LD++ NDIT  KTPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGFKLDELRNDITGGKTPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            FAFEKFP ++  LTTQMKSVGE MA+GRT QESFQKALR LE G  G+   +      D 
Sbjct: 362  FAFEKFPAADDRLTTQMKSVGEVMAMGRTIQESFQKALRGLETGLCGFNPRS-----SDK 416

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
             +++  L  P P+RM  +  A + G  ++EIHE+  ID WFL Q ++L+  E+ +    +
Sbjct: 417  AEIRRELANPGPERMLFVADAFRAGFTLEEIHEICAIDPWFLAQIEDLMKEEKAVSDGIL 476

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
            S++       +KR+GFSDK++A     +EKEVRE R +L + P YKRVDTCAAEF   T 
Sbjct: 477  SDLDFAALRRLKRKGFSDKRLAQLLNVSEKEVREHRYALKLHPVYKRVDTCAAEFATETA 536

Query: 627  YMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSN 686
            Y+YS+Y+ ECES P+ +KKV+ILGGGPNRIGQGIEFDYCC H + +L+ +G+ETIM+N N
Sbjct: 537  YLYSTYEEECESRPSDRKKVMILGGGPNRIGQGIEFDYCCVHAALALRESGFETIMVNCN 596

Query: 687  PETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHR 746
            PETVSTD+DTSDRLYFEPLT+EDVL ++  E P G+IV +GGQTPLKL+           
Sbjct: 597  PETVSTDFDTSDRLYFEPLTLEDVLEIVRTENPWGVIVHYGGQTPLKLA----------- 645

Query: 747  LPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEIG 806
              +A  +  V I GTS DSIDAAEDRERF  ++ +L + QP   IA +E +AL  A+EIG
Sbjct: 646  --NALVENGVNIIGTSADSIDAAEDRERFQKVLNDLGLRQPPNRIAHNEEEALVKAEEIG 703

Query: 807  YPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALAD 866
            YP+VVRPSYVLGGRAM+IV++ E L  Y+  AV+V  + PVL+D +L++AIE+DVD ++D
Sbjct: 704  YPLVVRPSYVLGGRAMQIVHSAEELQKYMREAVQVSEDSPVLLDFFLNNAIEVDVDCVSD 763

Query: 867  SCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNC 926
               +VVIGGIM+H+EQAG+HSGDS C +P  ++S    D I   T  +A  L V GLMN 
Sbjct: 764  G-KDVVIGGIMQHVEQAGIHSGDSGCSLPPYSLSEEIQDEIRRQTKAMAYALGVVGLMNV 822

Query: 927  QYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPKH 986
            Q+A+   G V++LE NPRASRTVPFVSKA G PLAK  A  M+G SL + G  KEV+P  
Sbjct: 823  QFAV-QDGVVFVLEVNPRASRTVPFVSKATGVPLAKVGARCMAGISLKEQGVEKEVVPDF 881

Query: 987  VSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVFL 1046
             +VKEAV PF KF G D +LGPEMRSTGEVMG+  SF  A+ KAQ+ AG++L  +G +FL
Sbjct: 882  YAVKEAVFPFIKFPGVDTILGPEMRSTGEVMGVGASFGEAYYKAQLGAGERLNPTGKIFL 941

Query: 1047 SLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVAN 1106
            S+ +  K  + + AK F  +G+ I +T GTA +L   G+ V+ + K+ EGRPH GD + N
Sbjct: 942  SVREEDKERVIKTAKNFQVLGYGICATRGTAQYLTEHGLIVQTINKVPEGRPHIGDALKN 1001

Query: 1107 GQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRS 1156
            G+I ++V T S D     D   +R+  L  +VP  TT +G  A +E  +S
Sbjct: 1002 GEIALVVNTVSSDPQSVSDSHIIRQSALQQRVPQYTTTAGGEAMSEGAKS 1051


>gi|339489452|ref|YP_004703980.1| carbamoyl phosphate synthase, large subunit [Pseudomonas putida S16]
 gi|338840295|gb|AEJ15100.1| carbamoyl phosphate synthase, large subunit [Pseudomonas putida S16]
          Length = 1073

 Score = 1251 bits (3237), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 630/1089 (57%), Positives = 801/1089 (73%), Gaps = 30/1089 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILILGAGPIVIGQACEFDYSG QACKAL+EEG+ VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGFRVILVNSNPATIMTDPAMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  + V +++EKERPDALLPTMGGQTALN A+ L   G LEK+GVE+IGA  D 
Sbjct: 63   ATYIEPIKWQSVAKIIEKERPDALLPTMGGQTALNCALDLERHGVLEKFGVEMIGANADT 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  F +AMK IG++ P SGI ++++E  ++   +G FP IIRP+FT+GGTGGGI
Sbjct: 123  IDKAEDRSRFDKAMKDIGLECPRSGIAHSMEEANAVLERLG-FPCIIRPSFTMGGTGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEFE IC  GL  S T ++L+++SL+GWKEYE+EV+RD  DN +I+CSIEN DPMG
Sbjct: 182  AYNREEFEEICARGLDLSPTKELLIDESLIGWKEYEMEVVRDKKDNCIIVCSIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGVE GGSNVQF + P  G ++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQIMRNASLAVLREIGVETGGSNVQFGICPNTGRMVVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT  +TPASFEPSIDYVVTK+PR
Sbjct: 302  PRVSRSSALASKATGFPIAKIAAKLAVGYTLDELQNDITGGRTPASFEPSIDYVVTKLPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            FAFEKFP ++  LTTQMKSVGE MA+GRTFQES QKALR LE G     C    ++D   
Sbjct: 362  FAFEKFPKADARLTTQMKSVGEVMAIGRTFQESLQKALRGLEVG----ACGLDPKVDLAN 417

Query: 507  EQ----LKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLL 562
             +    LK  L VP  +R+  +  AM+ GM  ++I +L+ ID WFL Q ++LI  E+ + 
Sbjct: 418  PEASSILKRELTVPGAERIWYVADAMRAGMTCEQIFDLTGIDMWFLVQMEDLIKEEEKVK 477

Query: 563  TQSVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFE 622
            T ++S++ KD    +KR+GFSD+++A     T+K +R  R  L V P YKRVDTCAAEF 
Sbjct: 478  TLALSSIDKDYMLRLKRKGFSDQRLAKLLGITDKNLRRHRHKLEVFPVYKRVDTCAAEFA 537

Query: 623  ANTPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIM 682
             +T Y+YS+Y+ ECE+ P+ + K++ILGGGPNRIGQGIEFDYCC H + +L+  GYETIM
Sbjct: 538  TDTAYLYSTYEEECEANPSTRDKIMILGGGPNRIGQGIEFDYCCVHAALALREDGYETIM 597

Query: 683  MNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYL 742
            +N NPETVSTDYDTSDRLYFEPLT+EDVL V  +E+P+G+IV +GGQTPLKL+    + L
Sbjct: 598  VNCNPETVSTDYDTSDRLYFEPLTLEDVLEVCRVEKPKGVIVHYGGQTPLKLA----RAL 653

Query: 743  DEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIA 802
            +E  +P         I GTSPD+ID AEDRERF  +++ LS+ QP     +SE +A++ A
Sbjct: 654  EEAGVP---------IIGTSPDAIDRAEDRERFQQMVQRLSLLQPPNATVRSEEEAISAA 704

Query: 803  KEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVD 862
              IGYP+VVRPSYVLGGRAMEIVY  + L  YL  AV+V  + PVL+D +L+ AIE+DVD
Sbjct: 705  GGIGYPLVVRPSYVLGGRAMEIVYELDELKRYLREAVQVSNDSPVLLDHFLNCAIEMDVD 764

Query: 863  ALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCG 922
            A+ D   +VVIG IM+HIEQAGVHSGDSAC +P  ++S    D +     K+A  L V G
Sbjct: 765  AVCDGT-DVVIGAIMQHIEQAGVHSGDSACSLPPYSLSKEVQDEVRVQVKKMALELGVVG 823

Query: 923  LMNCQYAITTSGD-VYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKE 981
            LMN Q A+   GD +Y++E NPRASRTVPFVSK IG  LA  AA VM+GK+L +LGFT+E
Sbjct: 824  LMNVQLAL--QGDKIYVIEVNPRASRTVPFVSKCIGTSLAMIAARVMAGKTLKELGFTQE 881

Query: 982  VIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLS 1041
            +IP   SVKEAV PF KF G D +LGPEM+STGEVMG+  SF  AFAKAQ+ A + LP  
Sbjct: 882  IIPNFYSVKEAVFPFAKFPGVDPILGPEMKSTGEVMGVGDSFGEAFAKAQMGASEVLPTG 941

Query: 1042 GTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAG 1101
            GT F+S+ D  KP +  +A+  + +GF++V+T+GTA  +E  G+ V RV K+ EGRPH  
Sbjct: 942  GTAFISVRDDDKPQVAGVARDLIALGFEVVATAGTAKVIEAAGLKVRRVNKVTEGRPHVV 1001

Query: 1102 DMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNT 1161
            DM+ N ++ +++ T+ G      D   +RR  L +K+   TT++   A  EA++     T
Sbjct: 1002 DMIKNDEVSLIINTTEGRQ-SIADSYSIRRNALQHKIYCTTTIAAGEAICEALKFGPEKT 1060

Query: 1162 VTMTALQDF 1170
            V    LQD 
Sbjct: 1061 VRR--LQDL 1067


>gi|90022373|ref|YP_528200.1| carbamoyl phosphate synthase large subunit [Saccharophagus degradans
            2-40]
 gi|89951973|gb|ABD81988.1| carbamoyl-phosphate synthase large subunit [Saccharophagus degradans
            2-40]
          Length = 1077

 Score = 1251 bits (3237), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 626/1076 (58%), Positives = 791/1076 (73%), Gaps = 18/1076 (1%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILI+GAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIKSILIIGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPSMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+T E V +++EKERPDA+LPTMGGQTALN A+AL + G LE++GVELIGA  DA
Sbjct: 63   ATYIEPITWETVAKIIEKERPDAVLPTMGGQTALNCALALHKHGVLEEFGVELIGATEDA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR+ F QAMK IG++   + I +T++E   +  E G FP IIRP+FT+GG+GGGI
Sbjct: 123  IDKAEDRNRFDQAMKKIGLECARAKIVHTMEEANQVPKEFG-FPCIIRPSFTMGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN EEFE IC  GL  S T+++L+++SLLGWKEYE+EV+RD  DN +IICSIEN DPMG
Sbjct: 182  AYNWEEFEEICTRGLDLSPTNELLIDESLLGWKEYEMEVVRDKNDNCIIICSIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ +R+ SIA++REIGVE GGSNVQFAVNP DG ++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQIMRNASIAVLREIGVETGGSNVQFAVNPEDGRLVVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT   TPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKIAAKLAVGYTLDELQNDITGGATPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            F FEKF  ++  LTTQMKSVGE MA+GR FQES QKALR LE G +G+        D   
Sbjct: 362  FTFEKFGDADARLTTQMKSVGEVMAIGRNFQESLQKALRGLEVGSAGFEPRVDLTGDNAL 421

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
            E ++  L  P  +R+  +  A + GM V+E+HE S ID WFL Q K++ID E  L +  +
Sbjct: 422  ELIRRDLSTPGAERIWYVADAFRAGMTVEEVHEQSAIDPWFLVQIKDIIDTETALSSMPL 481

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
             ++ K   + +KR+GFSDK++      +EK +R  R  L V P YKRVDTCAAEF  +T 
Sbjct: 482  VDVDKRIMFNLKRKGFSDKRLGKLLGVSEKTLRGHRHKLDVHPVYKRVDTCAAEFSTSTA 541

Query: 627  YMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSN 686
            YMYS+YD ECES PT ++K++++GGGPNRIGQGIEFDYCC H + + + AGYE IM+N N
Sbjct: 542  YMYSTYDEECESNPTSREKIMVIGGGPNRIGQGIEFDYCCVHAALASREAGYEAIMVNCN 601

Query: 687  PETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHR 746
            PETVSTDYDTSDRLYFEP+T+EDVL ++  E+P+G+IVQFGGQTPLKL+      L+   
Sbjct: 602  PETVSTDYDTSDRLYFEPVTLEDVLEIVHREKPKGVIVQFGGQTPLKLA----NALEAEG 657

Query: 747  LPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEIG 806
            +P         I GTSP++ID AEDRERF  +I+ L + QP   I +S  +A+ IA  +G
Sbjct: 658  VP---------IIGTSPEAIDRAEDRERFQQMIQRLELLQPPNAIVRSTEEAIHIAPTVG 708

Query: 807  YPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALAD 866
            YP+VVRPSYVLGGRAMEIVYT+  L TY+  AV+   + PVL+D +L++AIE+D+DA++D
Sbjct: 709  YPLVVRPSYVLGGRAMEIVYTENELRTYMREAVQASEDSPVLLDHFLNNAIEVDIDAVSD 768

Query: 867  SCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNC 926
                VVIGGIM+HIEQ GVHSGDSAC +P  ++     D +     K+A+ L V GLMN 
Sbjct: 769  G-ERVVIGGIMQHIEQCGVHSGDSACSLPPYSLPEDVQDEMREQVRKMARELGVIGLMNV 827

Query: 927  QYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPKH 986
            Q A    G +Y++E NPR SRTVPFVSK IG  LAK AAL  +GK+L +LGFT+E++P +
Sbjct: 828  QLAY-QDGRIYVIEVNPRGSRTVPFVSKCIGVSLAKIAALCQTGKTLEELGFTEEIVPDY 886

Query: 987  VSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVFL 1046
             SVKEAV PF KF   D +LGPEM+STGEVMG+  +F  A++KAQ+ +G  LP SGT F+
Sbjct: 887  YSVKEAVFPFNKFPAVDPILGPEMKSTGEVMGVGDTFAEAYSKAQVGSGGDLPTSGTAFI 946

Query: 1047 SLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVAN 1106
            S+ D  K  +  +AK   D+GF +V+T GTA  LE  G++V+ V K+ EGRPH  DM+ N
Sbjct: 947  SVRDFDKDGIVVVAKELTDMGFSVVATRGTAKTLEAAGLSVKVVNKVGEGRPHIVDMIKN 1006

Query: 1107 GQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTV 1162
             ++ M++ T+ G    + D   +RR      V   TT++ A A   A+R  K++ V
Sbjct: 1007 REVAMVINTTEGKKAIK-DSASIRRSAENNHVYYTTTLAAANALCMALRFGKNHEV 1061


>gi|392311310|ref|ZP_10273844.1| carbamoyl phosphate synthase large subunit [Pseudoalteromonas citrea
            NCIMB 1889]
          Length = 1072

 Score = 1251 bits (3237), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 624/1077 (57%), Positives = 791/1077 (73%), Gaps = 18/1077 (1%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTDL+ ILILGAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDLKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  E+VE+++EKE+PDA+LPTMGGQTALN A+ L + G L K+GVELIGA  DA
Sbjct: 63   ATYIEPIHWEVVEKIIEKEKPDAVLPTMGGQTALNCALDLDKYGVLAKHGVELIGATADA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAE+R+ F  AMK IG++ P + I +TLDE   +   IG FP IIRP+FT+GGTGGG+
Sbjct: 123  IDKAENRERFDVAMKNIGLECPRAEIAHTLDEAHDVLTRIG-FPCIIRPSFTMGGTGGGV 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEF+ IC  GL  S TS++L+++SL+GWKEYE+EV+RD  DN +I+C+IEN DPMG
Sbjct: 182  AYNQEEFDEICTRGLDLSPTSELLIDESLIGWKEYEMEVVRDKNDNCIIVCAIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGVE GGSNVQF VNP DG +++IEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQLMRNASMAVLREIGVETGGSNVQFGVNPDDGRMVIIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL++GY+LD++ NDIT   TPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKIAAKLAIGYTLDELQNDITGGATPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            F FEKF G+   LTTQMKSVGE MA+GR  QES  KALR LE G +G+      +     
Sbjct: 362  FNFEKFAGANDRLTTQMKSVGEVMAIGRNQQESLHKALRGLEVGANGFNPIVALDDPKAK 421

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
            E++   LR P  +R+  I  AM+ GM V+++ EL+ +D+W+L Q +++I  E  +    +
Sbjct: 422  EKIIRELREPGAERIWYIADAMRHGMSVEDVFELTKVDRWYLVQIEDIIKDEATIADAGL 481

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
            + +TK+    +KR+GF+D +IA     +EKE+R+KR  L ++P YKRVDTCAAEF ++T 
Sbjct: 482  AGLTKEFLRRLKRKGFADARIAEIAGVSEKEIRKKRHQLEILPVYKRVDTCAAEFSSDTA 541

Query: 627  YMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSN 686
            YMYS+YD ECE+ P+ K K++++GGGPNRIGQGIEFDYCC H + +L+  GYETIM+N N
Sbjct: 542  YMYSTYDEECEANPSDKDKIMVIGGGPNRIGQGIEFDYCCVHAALALREDGYETIMVNCN 601

Query: 687  PETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHR 746
            PETVSTDYDTSDRL+FEP+T+EDVL ++ +E+P G+IVQ+GGQTPLKL+          R
Sbjct: 602  PETVSTDYDTSDRLFFEPITLEDVLEIVRVEKPVGVIVQYGGQTPLKLA----------R 651

Query: 747  LPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEIG 806
               A+G   V I GTSPD+ID AEDRERF  +++ L + QP+     S  +A+A ++EIG
Sbjct: 652  ELEANG---VPIIGTSPDAIDRAEDRERFQQLVERLDLLQPENATVTSTEEAIAKSQEIG 708

Query: 807  YPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALAD 866
            +P+VVRPSYVLGGRAMEIVY ++ L  Y+  AV+   E PVL+D++L DAIE+DVDA+ D
Sbjct: 709  FPLVVRPSYVLGGRAMEIVYDEDDLRRYMTEAVQASNEAPVLLDRFLDDAIEVDVDAMCD 768

Query: 867  SCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNC 926
                V+IGGIMEHIEQAGVHSGDSAC +P  ++S    D +      +A  L V GLMN 
Sbjct: 769  G-EQVIIGGIMEHIEQAGVHSGDSACSLPAHSLSQDIQDVMRKQVTGMALELGVVGLMNT 827

Query: 927  QYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPKH 986
            Q+A+   G VYL+E NPRA+RTVPFVSKA G  LAK AA  M+G++L   G T+E+IP +
Sbjct: 828  QFAV-KDGKVYLIEVNPRAARTVPFVSKATGVALAKVAARCMAGQTLASQGVTEEIIPPY 886

Query: 987  VSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVFL 1046
             SVKE VLPF KFQG D L GPEMRSTGEVMG+  +F  AFAKAQ+ AG  LP  G   L
Sbjct: 887  YSVKEVVLPFAKFQGVDPLRGPEMRSTGEVMGVGDNFADAFAKAQLGAGNALPRGGRALL 946

Query: 1047 SLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVAN 1106
            S+ +  K  +  +AK   DIGF++ +T+GTA  LE  GI V RV K+ EGRPH  D + N
Sbjct: 947  SVRNSDKSRIVELAKTMRDIGFELDATNGTAKALEEAGIEVRRVNKVFEGRPHILDRIKN 1006

Query: 1107 GQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTVT 1163
            G+   +V T+ G    + D   LRR  L +K    TT++ A AN  A  +   N V 
Sbjct: 1007 GEYSYIVNTTEGRQAIE-DSKVLRRGALRHKTNYTTTLNAAFANCTAHAADDRNVVN 1062


>gi|357417417|ref|YP_004930437.1| carbamoyl phosphate synthase large subunit [Pseudoxanthomonas spadix
            BD-a59]
 gi|355334995|gb|AER56396.1| carbamoyl phosphate synthase large subunit [Pseudoxanthomonas spadix
            BD-a59]
          Length = 1080

 Score = 1251 bits (3237), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 629/1071 (58%), Positives = 795/1071 (74%), Gaps = 27/1071 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            +RTD+  ILI+GAGPIVIGQACEFDYSG QACKAL+EEGY V+L+NSNPATIMTDP +AD
Sbjct: 3    RRTDINTILIIGAGPIVIGQACEFDYSGAQACKALREEGYRVVLVNSNPATIMTDPEMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
              YI P+  + VE+++ KERPDALLPTMGGQTALN A+ LA+ G L+KY VELIGA+ +A
Sbjct: 63   AVYIEPINWQTVEKIIAKERPDALLPTMGGQTALNCALDLADHGVLDKYNVELIGARREA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I  AEDR+LF+ AM  IG++ P + +  + ++ + I   +G +P IIRP+FTLGG+GGGI
Sbjct: 123  IMMAEDRELFRVAMGEIGLECPKAAVARSFEQAVEIQATVG-YPTIIRPSFTLGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEFE I K GL  S   +VLVE+S+LGWKE+E+EV+RD ADN +I+CSIEN+DPMG
Sbjct: 182  AYNREEFEDIIKRGLELSPVHEVLVEESVLGWKEFEMEVVRDTADNCIIVCSIENLDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQRLRD SIA++R+IGV+ GGSNVQF +N   G V+VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQRLRDASIAVLRKIGVDTGGSNVQFGINAQTGRVVVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITK-KTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ N+IT  KTPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGYTLDELKNEITGGKTPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDW-- 504
            FAFEKFP ++  LTTQMKSVGE MA+GRTF ES QKALR LE G  G   +    LD   
Sbjct: 362  FAFEKFPQADARLTTQMKSVGEVMAMGRTFSESLQKALRGLETGKVGLDPTG---LDLGS 418

Query: 505  --DWEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLL 562
              D   L+  L+ P P+R+  +  A + GM V+EIH LSFID WFL Q ++LI  E  + 
Sbjct: 419  EDDMASLRRELKAPGPERLFYVGDAFRAGMSVEEIHALSFIDPWFLDQIEDLIADEARVA 478

Query: 563  TQSVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFE 622
             + + ++      E+KR GFSD ++A  T + E  VR  R +LGV P YKRVD+ AAEF 
Sbjct: 479  AEGLGSLDATRMRELKRAGFSDARLAQLTATDETAVRVLRKALGVRPVYKRVDSSAAEFA 538

Query: 623  ANTPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIM 682
             +T YMYS+Y+ ECE+ PT + K++ILGGGPNRIGQGIEFDYCC H + +L++ GYETIM
Sbjct: 539  TDTAYMYSTYEDECEANPTNRDKIMILGGGPNRIGQGIEFDYCCVHAALALRADGYETIM 598

Query: 683  MNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYL 742
            +N NPETVSTDYDTSDRLYFEPLT+EDVL +++LE+P+G+IVQ+GGQTPLKL+       
Sbjct: 599  VNCNPETVSTDYDTSDRLYFEPLTLEDVLAIVELEKPKGVIVQYGGQTPLKLA------- 651

Query: 743  DEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIA 802
               R   A+G   V + GTSPDSID AEDRERF  ++  L ++QP   IA+++ +AL +A
Sbjct: 652  ---RALEANG---VPVIGTSPDSIDLAEDRERFQGLVDRLGLKQPPNRIARNDQEALLLA 705

Query: 803  KEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVD 862
            +EIGYP+VVRPSYVLGGRAMEIVY +  L  Y+ +AV+V  + PVL+D++L +A+E+DVD
Sbjct: 706  REIGYPLVVRPSYVLGGRAMEIVYGESDLARYVRDAVKVSNDSPVLLDRFLDNAVEVDVD 765

Query: 863  ALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCG 922
             +AD  G V+IGG+MEHIE+AGVHSGDS+C +P  ++S+     +    ++LAK LNV G
Sbjct: 766  IIADKDGQVLIGGVMEHIEEAGVHSGDSSCSLPPYSLSAQTQAELRRQVVELAKALNVVG 825

Query: 923  LMNCQYAITTSGD----VYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGF 978
            LMN Q+AI    D    VYLLE NPRASRTVPFVSKA G  LAK AA  M+GK+L + G 
Sbjct: 826  LMNTQFAIQAGDDGQDIVYLLEVNPRASRTVPFVSKATGMALAKIAARCMAGKTLAEQGA 885

Query: 979  TKEVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKL 1038
             KE++P + SVKEA+ PF KFQG D +LGPEMRSTGEVMG+  SF  A A+AQ AAG K 
Sbjct: 886  IKEIVPDYYSVKEAIFPFAKFQGVDPILGPEMRSTGEVMGVGHSFAAAMARAQEAAGIKA 945

Query: 1039 PLSGTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRP 1098
            P  G  F+S+ D  K  +  +A+A L+ GF +V+T GTA +L   GI  E V K+ +GRP
Sbjct: 946  PQPGKAFVSVRDPDKQRVLPVARALLERGFSLVATVGTAAWLRKHGIECELVNKVTDGRP 1005

Query: 1099 HAGDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALA 1149
            H  D++ NG+I  +V T+ G      D   +RR  L  ++   TT++GA A
Sbjct: 1006 HIVDLIKNGEIVYIVNTTEGRRAIS-DSFSIRREALQQRLTYSTTIAGARA 1055



 Score =  235 bits (600), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 152/424 (35%), Positives = 230/424 (54%), Gaps = 24/424 (5%)

Query: 61  VRASSAKIDSSA-ELSNGAA----SSKDQKLGKRTDLRKILILGAGPIVIGQACEFDYSG 115
           VR    ++DSSA E +   A    + +D+     T+  KI+ILG GP  IGQ  EFDY  
Sbjct: 523 VRPVYKRVDSSAAEFATDTAYMYSTYEDECEANPTNRDKIMILGGGPNRIGQGIEFDYCC 582

Query: 116 TQACKALKEEGYEVILINSNPATIMTDPGLADRTYITPMTPELVEQVLEKERPDALLPTM 175
             A  AL+ +GYE I++N NP T+ TD   +DR Y  P+T E V  ++E E+P  ++   
Sbjct: 583 VHAALALRADGYETIMVNCNPETVSTDYDTSDRLYFEPLTLEDVLAIVELEKPKGVIVQY 642

Query: 176 GGQTALNLAVALAESGALEKYGVELIGAKLDAIKKAEDRDLFKQAMKTIGVKTPPSGIGN 235
           GGQT L LA       ALE  GV +IG   D+I  AEDR+ F+  +  +G+K PP+ I  
Sbjct: 643 GGQTPLKLA------RALEANGVPVIGTSPDSIDLAEDRERFQGLVDRLGLKQPPNRIAR 696

Query: 236 TLDECISIANEIGEFPLIIRPAFTLGGTGGGIAYNKEEFEAICKAGLAASLTSQVLVEKS 295
              E + +A EIG +PL++RP++ LGG    I Y + +     +  +  S  S VL+++ 
Sbjct: 697 NDQEALLLAREIG-YPLVVRPSYVLGGRAMEIVYGESDLARYVRDAVKVSNDSPVLLDRF 755

Query: 296 LLGWKEYELEVMRDLADNVVIICSIENVDPMGVHTGDSITVAPAQTLTDKEYQRLRDYSI 355
           L    E +++++ D    V+I   +E+++  GVH+GDS    P  +L+ +    LR   +
Sbjct: 756 LDNAVEVDVDIIADKDGQVLIGGVMEHIEEAGVHSGDSSCSLPPYSLSAQTQAELRRQVV 815

Query: 356 AIIREIGVECGGSNVQFAVNPV-DGE--VMVIEMNPRVSRSSALASKATGFPIAKMAAKL 412
            + + + V  G  N QFA+    DG+  V ++E+NPR SR+    SKATG  +AK+AA+ 
Sbjct: 816 ELAKALNV-VGLMNTQFAIQAGDDGQDIVYLLEVNPRASRTVPFVSKATGMALAKIAARC 874

Query: 413 SVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRFAFEKFPGSEPLLTTQMKSVGEAMAL 472
             G +L +    I +  P       DY   K   F F KF G +P+L  +M+S GE M +
Sbjct: 875 MAGKTLAE-QGAIKEIVP-------DYYSVKEAIFPFAKFQGVDPILGPEMRSTGEVMGV 926

Query: 473 GRTF 476
           G +F
Sbjct: 927 GHSF 930


>gi|358638082|dbj|BAL25379.1| carbamoyl phosphate synthase, large subunit [Azoarcus sp. KH32C]
          Length = 1075

 Score = 1251 bits (3236), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 635/1074 (59%), Positives = 803/1074 (74%), Gaps = 24/1074 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILI+GAGPI+IGQACEFDYSG QACKAL+EEGY V+L+NSNPATIMTDPG AD
Sbjct: 3    KRTDIQSILIIGAGPIIIGQACEFDYSGAQACKALREEGYRVVLVNSNPATIMTDPGTAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+T ++VE+++EKERPDALLPTMGGQTALN A+ LA++G LEKYGVELIGA  DA
Sbjct: 63   VTYIEPITWQVVERIIEKERPDALLPTMGGQTALNCALDLAKNGVLEKYGVELIGASRDA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  FK AM  IG+ +  SGI ++++E + +   IG FP+IIRP+FTLGGTGGGI
Sbjct: 123  IDKAEDRLKFKDAMTKIGLGSARSGIAHSMEEALQVQGGIG-FPVIIRPSFTLGGTGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN EEF+ ICK GL AS T+++L+E+SL+GWKEYE+EV+RD ADN +I+CSIEN+DPMG
Sbjct: 182  AYNMEEFDEICKRGLEASPTNELLIEESLIGWKEYEMEVVRDRADNCIIVCSIENLDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAP+QTLTDKEYQ LR+ SIA++REIGV+ GGSNVQFA++P DG ++VIEMN
Sbjct: 242  VHTGDSITVAPSQTLTDKEYQILRNASIAVLREIGVDTGGSNVQFAISPKDGRMIVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL++GY+LD++ NDIT   TPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAIGYTLDELKNDITGGATPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            FAFEKFP +   LTTQMKSVGE MA+GRTFQESFQKALR LE G  G     + E++ D 
Sbjct: 362  FAFEKFPQANDRLTTQMKSVGEVMAMGRTFQESFQKALRGLEVGVYG-----LDEVEADR 416

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
            E L++ L  P   R+  +  A ++G   +++  L+ ID WFL Q ++++  E+ L  +S+
Sbjct: 417  EDLEHELANPGAQRIWYVGQAFREGYTQEQVFNLTKIDPWFLAQIEDIVLTEKALTGRSL 476

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
              M   +   +KR+GFSD+++A      E  VR  R + GV P +KRVDTCAAEF  +T 
Sbjct: 477  KAMPAAEMRGLKRKGFSDRRLAKLLGVDETAVRLHRQAQGVRPVFKRVDTCAAEFSTSTA 536

Query: 627  YMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSN 686
            YMYSSY+ ECE+ PT KKK+++LGGGPNRIGQGIEFDYCC H + +L+  GYETIM+N N
Sbjct: 537  YMYSSYEDECEARPTDKKKIMVLGGGPNRIGQGIEFDYCCVHAALALREDGYETIMVNCN 596

Query: 687  PETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHR 746
            PETVSTDYDTSDRLYFEP+T+ED+L ++ +E+P G+IVQFGGQTPLK +    Q L+E+ 
Sbjct: 597  PETVSTDYDTSDRLYFEPITLEDILEIVHIEKPVGVIVQFGGQTPLKRA----QALEENG 652

Query: 747  LPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEIG 806
            +P         I GTSPD IDAAEDRERF  ++ +L ++QP    A++   A+ +A EIG
Sbjct: 653  VP---------IIGTSPDMIDAAEDRERFQKLLNDLGLKQPPNRTARTPEQAVRLAAEIG 703

Query: 807  YPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALAD 866
            YP+VVRPSYVLGGRAMEIV+  + L  Y+  AV+V  E PVL+D++L+DA EIDVDAL+D
Sbjct: 704  YPLVVRPSYVLGGRAMEIVHEQKDLERYMREAVKVSNESPVLLDRFLNDATEIDVDALSD 763

Query: 867  SCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNC 926
                V+IGGIMEHIEQAGVHSGDSAC +P  T+S    D +   T  +A+ LNVCGLMN 
Sbjct: 764  G-QQVIIGGIMEHIEQAGVHSGDSACSLPPYTLSPRLQDELRRQTEAMARALNVCGLMNV 822

Query: 927  QYAITTSGD---VYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVI 983
            Q+AI   G+   VY+LE NPRASRTVPFVSKA G PLAK AA  M+G+SL   G T E++
Sbjct: 823  QFAIQGEGNDATVYVLEVNPRASRTVPFVSKACGLPLAKIAARCMAGQSLASQGVTGEIV 882

Query: 984  PKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGT 1043
            P + SVKEAV PF KF G D +LGPEM+STGEVMG+  SF  AF KAQ+AAG +LP SGT
Sbjct: 883  PPYYSVKEAVFPFVKFPGVDTILGPEMKSTGEVMGVGRSFAEAFVKAQLAAGVRLPKSGT 942

Query: 1044 VFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDM 1103
             F+S+    +     +A+   ++GF +V+T GTA  ++   I V  V K++EGRPH  DM
Sbjct: 943  AFISVKPADRGVAVEVARELHELGFSLVATRGTASAIDAANIPVTVVNKVNEGRPHIVDM 1002

Query: 1104 VANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSL 1157
            + N ++  ++ T        +D   +R   LA K+ + TT+ GA A    +R +
Sbjct: 1003 IKNNELSFVINTVEEKRQAIVDSRSIRTSALAAKLTLFTTIEGARAACMGMRHI 1056



 Score =  259 bits (663), Expect = 5e-66,   Method: Compositional matrix adjust.
 Identities = 170/492 (34%), Positives = 257/492 (52%), Gaps = 51/492 (10%)

Query: 61  VRASSAKIDS-SAELSNGAA----SSKDQKLGKRTDLRKILILGAGPIVIGQACEFDYSG 115
           VR    ++D+ +AE S   A    S +D+   + TD +KI++LG GP  IGQ  EFDY  
Sbjct: 517 VRPVFKRVDTCAAEFSTSTAYMYSSYEDECEARPTDKKKIMVLGGGPNRIGQGIEFDYCC 576

Query: 116 TQACKALKEEGYEVILINSNPATIMTDPGLADRTYITPMTPELVEQVLEKERPDALLPTM 175
             A  AL+E+GYE I++N NP T+ TD   +DR Y  P+T E + +++  E+P  ++   
Sbjct: 577 VHAALALREDGYETIMVNCNPETVSTDYDTSDRLYFEPITLEDILEIVHIEKPVGVIVQF 636

Query: 176 GGQTALNLAVALAESGALEKYGVELIGAKLDAIKKAEDRDLFKQAMKTIGVKTPPSGIGN 235
           GGQT L  A AL E+      GV +IG   D I  AEDR+ F++ +  +G+K PP+    
Sbjct: 637 GGQTPLKRAQALEEN------GVPIIGTSPDMIDAAEDRERFQKLLNDLGLKQPPNRTAR 690

Query: 236 TLDECISIANEIGEFPLIIRPAFTLGGTGGGIAYNKEEFEAICKAGLAASLTSQVLVEKS 295
           T ++ + +A EIG +PL++RP++ LGG    I + +++ E   +  +  S  S VL+++ 
Sbjct: 691 TPEQAVRLAAEIG-YPLVVRPSYVLGGRAMEIVHEQKDLERYMREAVKVSNESPVLLDRF 749

Query: 296 LLGWKEYELEVMRDLADNVVIICSIENVDPMGVHTGDSITVAPAQTLTDKEYQRLRDYSI 355
           L    E +++ + D    V+I   +E+++  GVH+GDS    P  TL+ +    LR  + 
Sbjct: 750 LNDATEIDVDALSD-GQQVIIGGIMEHIEQAGVHSGDSACSLPPYTLSPRLQDELRRQTE 808

Query: 356 AIIREIGVECGGSNVQFAVNPV--DGEVMVIEMNPRVSRSSALASKATGFPIAKMAAKLS 413
           A+ R + V CG  NVQFA+     D  V V+E+NPR SR+    SKA G P+AK+AA+  
Sbjct: 809 AMARALNV-CGLMNVQFAIQGEGNDATVYVLEVNPRASRTVPFVSKACGLPLAKIAARCM 867

Query: 414 VGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRFAFEKFPGSEPLLTTQMKSVGEAMALG 473
            G SL       ++       P   Y   K   F F KFPG + +L  +MKS GE M +G
Sbjct: 868 AGQSL------ASQGVTGEIVPP--YYSVKEAVFPFVKFPGVDTILGPEMKSTGEVMGVG 919

Query: 474 RTFQESFQKALRSLECGFSGWGCSNVKELDWDWEQLKYSLRVPNPDRMQAIYAAMKKGMK 533
           R+F E+F KA                        QL   +R+P             +G+ 
Sbjct: 920 RSFAEAFVKA------------------------QLAAGVRLPKSGTAFISVKPADRGVA 955

Query: 534 VD---EIHELSF 542
           V+   E+HEL F
Sbjct: 956 VEVARELHELGF 967


>gi|421568351|ref|ZP_16014076.1| carbamoyl-phosphate synthase large chain [Neisseria meningitidis
            NM3001]
 gi|402341521|gb|EJU76695.1| carbamoyl-phosphate synthase large chain [Neisseria meningitidis
            NM3001]
          Length = 1071

 Score = 1251 bits (3236), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 623/1070 (58%), Positives = 795/1070 (74%), Gaps = 22/1070 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTDL+ ILI+GAGPIVIGQACEFDYSG QACKAL+EEGY+VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDLKSILIIGAGPIVIGQACEFDYSGAQACKALREEGYKVILVNSNPATIMTDPEMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  + VE+++ KERPDA+LPTMGGQTALN A+ LA +G L KY VELIGA  DA
Sbjct: 63   VTYIEPIMWQTVEKIIAKERPDAILPTMGGQTALNCALDLARNGVLAKYNVELIGATEDA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  FK+AM+ IG+  P S + +T++E ++   ++G FP +IRP+FT+GG+GGGI
Sbjct: 123  IDKAEDRGRFKEAMEKIGLSCPKSFVCHTMNEALAAQEQVG-FPTLIRPSFTMGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYNK+EF AIC+ G  AS T ++L+E+S+LGWKEYE+EV+RD  DN +IICSIEN DPMG
Sbjct: 182  AYNKDEFLAICERGFDASPTHELLIEQSVLGWKEYEMEVVRDKNDNCIIICSIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGV+ GGSNVQFAVNP +GE++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQIMRNASLAVLREIGVDTGGSNVQFAVNPENGEMIVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VG++LD++ NDIT  KTPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGFTLDELRNDITGGKTPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            FAFEKFP ++  LTTQMKSVGE MA+GRT QESFQKALR LE G  G+   +      D 
Sbjct: 362  FAFEKFPAADDRLTTQMKSVGEVMAMGRTIQESFQKALRGLETGLCGFNPRS-----SDK 416

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
             +++  L  P P+RM  +  A + G  ++EIHE+  ID WFL Q ++L+  E+ +    +
Sbjct: 417  AEIRRELANPGPERMLFVADAFRAGFTLEEIHEICAIDPWFLAQIEDLMKEEKAVSDGIL 476

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
            S++       +KR+GFSDK++A     +EKEVRE R +L + P YKRVDTCAAEF   T 
Sbjct: 477  SDLDFAALRRLKRKGFSDKRLAQLLNVSEKEVREHRYALKLHPVYKRVDTCAAEFATETA 536

Query: 627  YMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSN 686
            Y+YS+Y+ ECE+ P+ +KKV+ILGGGPNRIGQGIEFDYCC H + +L+ +G+ETIM+N N
Sbjct: 537  YLYSTYEEECEARPSDRKKVMILGGGPNRIGQGIEFDYCCVHAALALRESGFETIMVNCN 596

Query: 687  PETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHR 746
            PETVSTD+DTSDRLYFEPLT+EDVL ++  E P G+IV +GGQTPLKL+           
Sbjct: 597  PETVSTDFDTSDRLYFEPLTLEDVLEIVRTENPWGVIVHYGGQTPLKLA----------- 645

Query: 747  LPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEIG 806
              +A  +  V I GTS DSIDAAEDRERF  ++ +L + QP   IA +E +AL  A+EIG
Sbjct: 646  --NALVENGVNIIGTSADSIDAAEDRERFQKVLNDLGLRQPPNRIAHNEEEALVKAEEIG 703

Query: 807  YPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALAD 866
            YP+VVRPSYVLGGRAM+IV++ E L  Y+  AV+V  + PVL+D +L++AIE+DVD ++D
Sbjct: 704  YPLVVRPSYVLGGRAMQIVHSAEQLQKYMREAVQVSEDSPVLLDFFLNNAIEVDVDCVSD 763

Query: 867  SCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNC 926
               +VVIGGIM+H+EQAG+HSGDS C +P  ++S    D I   T  +A  L V GLMN 
Sbjct: 764  G-KDVVIGGIMQHVEQAGIHSGDSGCSLPPYSLSEEIQDEIRRQTKAMAYALGVVGLMNV 822

Query: 927  QYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPKH 986
            Q+A+   G V++LE NPRASRTVPFVSKA G PLAK  A  M+G SL + G  KEV+P  
Sbjct: 823  QFAV-QDGVVFVLEVNPRASRTVPFVSKATGVPLAKVGARCMAGISLKEQGVEKEVVPDF 881

Query: 987  VSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVFL 1046
             +VKEAV PF KF G D +LGPEMRSTGEVMG+  SF  A+ KAQ+ AG++L  +G +FL
Sbjct: 882  YAVKEAVFPFIKFPGVDTILGPEMRSTGEVMGVGASFGEAYYKAQLGAGERLNPTGKIFL 941

Query: 1047 SLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVAN 1106
            S+ +  K  + + AK F  +G+ I +T GTA +L   G+ V+ + K+ EGRPH GD + N
Sbjct: 942  SVREEDKERVIKTAKNFQALGYGICATRGTAQYLTEHGLIVQTINKVPEGRPHIGDALKN 1001

Query: 1107 GQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRS 1156
            G+I ++V T S D     D   +R+  L  +VP  TT +G  A +E  +S
Sbjct: 1002 GEIALVVNTVSNDPQSVSDSHIIRQSALQQRVPQYTTTAGGEAMSEGAKS 1051


>gi|422644508|ref|ZP_16707646.1| carbamoyl phosphate synthase large subunit [Pseudomonas syringae pv.
            maculicola str. ES4326]
 gi|330958060|gb|EGH58320.1| carbamoyl phosphate synthase large subunit [Pseudomonas syringae pv.
            maculicola str. ES4326]
          Length = 1073

 Score = 1251 bits (3236), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 627/1088 (57%), Positives = 798/1088 (73%), Gaps = 28/1088 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILILGAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPAMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  + V +++EKERPDALLPTMGGQTALN A+ L   G LEK+GVE+IGA  D 
Sbjct: 63   ATYIEPIKWQTVAKIIEKERPDALLPTMGGQTALNCALDLEREGVLEKFGVEMIGANADT 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  F +AMK+IG+  P SGI ++++E  ++  ++G FP IIRP+FT+GGTGGGI
Sbjct: 123  IDKAEDRSRFDKAMKSIGLACPRSGIAHSMEEANAVLEKLG-FPCIIRPSFTMGGTGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEFE IC  GL  S T ++L+++SL+GWKEYE+EV+RD  DN +I+CSIEN DPMG
Sbjct: 182  AYNREEFEEICARGLDLSPTKELLIDESLIGWKEYEMEVVRDKKDNCIIVCSIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ LR+ S+A++REIGVE GGSNVQF + P  G ++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQILRNASLAVLREIGVETGGSNVQFGICPDTGRMVVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIA++AAKL+VGY+LD++ N+IT  KTPASFEPSIDYVVTK+PR
Sbjct: 302  PRVSRSSALASKATGFPIARVAAKLAVGYTLDELSNEITGGKTPASFEPSIDYVVTKLPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDW-- 504
            FAFEKF  ++  LTTQMKSVGE MA+GRTFQES QKALR LE G  G       +LD   
Sbjct: 362  FAFEKFSKADARLTTQMKSVGEVMAIGRTFQESLQKALRGLEVGVCGLD----PKLDLSH 417

Query: 505  --DWEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLL 562
                  LK  L VP  +R+  +  A + GM V++I  ++ ID WFL Q ++L+  E+ + 
Sbjct: 418  PDSMSTLKRELTVPGAERIWYVADAFRAGMSVEDIFAMNMIDPWFLVQIEDLVKDEEKVK 477

Query: 563  TQSVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFE 622
            T  +S + +D  + +KR+GFSD ++A     TEK +R  R  L V P YKRVDTCAAEF 
Sbjct: 478  TLGLSAIDRDLMFRLKRKGFSDARLAKLLGVTEKNLRTHRHKLEVFPVYKRVDTCAAEFA 537

Query: 623  ANTPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIM 682
             +T Y+YS+Y+ ECE+ P+ + K++ILGGGPNRIGQGIEFDYCC H + +L+  GYETIM
Sbjct: 538  TDTAYLYSTYEEECEANPSTRDKIMILGGGPNRIGQGIEFDYCCVHAALALREDGYETIM 597

Query: 683  MNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYL 742
            +N NPETVSTDYDTSDRLYFEP+T+EDVL ++ +E+P+G+IVQ+GGQTPLKL+       
Sbjct: 598  VNCNPETVSTDYDTSDRLYFEPVTLEDVLEIVRVEKPKGVIVQYGGQTPLKLA------- 650

Query: 743  DEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIA 802
               R   A+G   V I GTSPD+ID AEDRERF  +++ L++ QP     +SE +A+  A
Sbjct: 651  ---RALEAAG---VPIIGTSPDAIDRAEDRERFQHMVERLNLRQPPNATVRSEDEAIRAA 704

Query: 803  KEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVD 862
             +IGYP+VVRPSYVLGGRAMEIVY ++ L  YL  AV+V  + PVL+D +L+ AIE+DVD
Sbjct: 705  AKIGYPLVVRPSYVLGGRAMEIVYQEDELKRYLREAVQVSNDSPVLLDHFLNCAIEMDVD 764

Query: 863  ALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCG 922
            A+ D   +VVIG IM+HIEQAGVHSGDSAC +P  ++ +   D +     K+A  L V G
Sbjct: 765  AVCDGT-DVVIGAIMQHIEQAGVHSGDSACSLPPYSLPAHIQDEMREQVKKMALELGVVG 823

Query: 923  LMNCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEV 982
            LMN Q A+    D+Y++E NPRASRTVPFVSK IG  LA  AA VM+GK+L +L FTKE+
Sbjct: 824  LMNVQLALQGE-DIYVIEVNPRASRTVPFVSKCIGVSLAMIAARVMAGKTLKELNFTKEI 882

Query: 983  IPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSG 1042
            IP   SVKEAV PF KF G D +LGPEM+STGEVMG+  +F  AFAKAQ+ A + LP  G
Sbjct: 883  IPNFYSVKEAVFPFAKFPGVDPILGPEMKSTGEVMGVGDTFGEAFAKAQMGASEVLPTGG 942

Query: 1043 TVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGD 1102
            T F+S+ D  KP +  +A+  +D+GF+IV+T+GTA  +E  G+ V RV K+ EGRPH  D
Sbjct: 943  TAFISVRDDDKPLVAGVARDLIDLGFQIVATAGTAKLIEAAGLKVRRVNKVTEGRPHVVD 1002

Query: 1103 MVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTV 1162
            M+ N ++ +++ T+ G      D   +RR  L +K+   TT++   A  EA++     TV
Sbjct: 1003 MIKNDEVTLIINTTEGRQ-SIADSYSIRRNALQHKIYCTTTIAAGEAICEALKFGPEKTV 1061

Query: 1163 TMTALQDF 1170
                LQD 
Sbjct: 1062 RR--LQDL 1067


>gi|385334925|ref|YP_005888872.1| carbamoyl phosphate synthase large subunit [Neisseria gonorrhoeae
            TCDC-NG08107]
 gi|317163468|gb|ADV07009.1| carbamoyl phosphate synthase large subunit [Neisseria gonorrhoeae
            TCDC-NG08107]
          Length = 1071

 Score = 1251 bits (3236), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 623/1070 (58%), Positives = 794/1070 (74%), Gaps = 22/1070 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTDL+ ILI+GAGPIVIGQACEFDYSG QACKAL+EEGY+VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDLKSILIIGAGPIVIGQACEFDYSGAQACKALREEGYKVILVNSNPATIMTDPEMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  + VE+++ KERPDA+LPTMGGQTALN A+ LA +G L KY VELIGA  DA
Sbjct: 63   VTYIEPIMWQTVEKIIAKERPDAILPTMGGQTALNCALDLARNGMLAKYNVELIGATEDA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  FK+AM+ IG+  P S + +T++E ++   ++G FP +IRP+FT+GG+GGGI
Sbjct: 123  IDKAEDRGRFKEAMEKIGLSCPKSFVCHTMNEALAAQEQVG-FPTLIRPSFTMGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYNK+EF AIC+ G  AS T ++L+E+S+LGWKEYE+EV+RD ADN +IICSIEN DPMG
Sbjct: 182  AYNKDEFLAICERGFDASPTHELLIEQSVLGWKEYEMEVVRDKADNCIIICSIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGV+ GGSNVQFAVNP +GE++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQIMRNASLAVLREIGVDTGGSNVQFAVNPENGEMIVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VG++LD++ NDIT  +TPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGFTLDELRNDITGGRTPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            FAFEKFP ++  LTTQMKSVGE MA+GRT QESFQKALR LE G  G+   +      D 
Sbjct: 362  FAFEKFPAADDRLTTQMKSVGEVMAMGRTIQESFQKALRGLETGLCGFNPRS-----EDK 416

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
             +++  L  P P+RM  +  A + G   +EIHE+  ID WFL Q ++L+  E+ +    +
Sbjct: 417  AEIRRELANPGPERMLFVADAFRAGFTPEEIHEICAIDPWFLAQIEDLMKEEKSVSDGQL 476

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
             ++       +KR+GFSDK++A     +EKEVRE R +L + P YKRVDTCAAEF   T 
Sbjct: 477  QDLDYAALRRLKRKGFSDKRLAQLLNVSEKEVREHRYALKLHPVYKRVDTCAAEFATETA 536

Query: 627  YMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSN 686
            Y+YS+Y+ ECES P+ +KKV+ILGGGPNRIGQGIEFDYCC H + +L+ +G+ETIM+N N
Sbjct: 537  YLYSTYEEECESRPSDRKKVMILGGGPNRIGQGIEFDYCCVHAALTLRESGFETIMVNCN 596

Query: 687  PETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHR 746
            PETVSTD+DTSDRLYFEPLT+EDVL ++  E P G+IV +GGQTPLKL+           
Sbjct: 597  PETVSTDFDTSDRLYFEPLTLEDVLEIVRTENPWGVIVHYGGQTPLKLA----------- 645

Query: 747  LPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEIG 806
              +A  +  V I GTS DSIDAAEDRERF  ++ +L + QP   IA +E +AL  A+EIG
Sbjct: 646  --NALVENGVNIIGTSADSIDAAEDRERFQKVLNDLGLRQPPNRIAHNEEEALVKAEEIG 703

Query: 807  YPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALAD 866
            YP+VVRPSYVLGGRAM+IV++ E L  Y+  AV+V  + PVL+D +L++AIE+DVD ++D
Sbjct: 704  YPLVVRPSYVLGGRAMQIVHSAEALQKYMREAVQVSEDSPVLLDFFLNNAIEVDVDCVSD 763

Query: 867  SCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNC 926
               +VVIGGIM+H+EQAG+HSGDS C +P  ++S    D I   T  +A  L V GLMN 
Sbjct: 764  G-KDVVIGGIMQHVEQAGIHSGDSGCSLPPYSLSEEIQDEIRRQTKAMAYALGVVGLMNV 822

Query: 927  QYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPKH 986
            Q+A+   G V++LE NPRASRTVPFVSKA G PLAK  A  M+G SL + G  KEV+P  
Sbjct: 823  QFAV-QDGVVFVLEVNPRASRTVPFVSKATGVPLAKVGARCMAGISLKEQGVEKEVVPDF 881

Query: 987  VSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVFL 1046
             +VKEAV PF KF G D +LGPEMRSTGEVMG+  SF  A+ KAQ+ AG++L  +G +FL
Sbjct: 882  YAVKEAVFPFIKFPGVDTILGPEMRSTGEVMGVGASFGEAYYKAQLGAGERLNPTGKIFL 941

Query: 1047 SLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVAN 1106
            S+ +  K  + + AK F  +G+ I +T GTA +L   G+ V+ + K+ EGRPH GD + N
Sbjct: 942  SVREEDKERVIKTAKNFQALGYGICATRGTAQYLTEHGLIVQAINKVPEGRPHIGDALKN 1001

Query: 1107 GQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRS 1156
            G+I ++V T S D     D   +R+  L  +VP  TT +G  A +E  +S
Sbjct: 1002 GEIALVVNTVSSDPQSVSDSHIIRQSALQQRVPQYTTTAGGEAMSEGAKS 1051


>gi|385324809|ref|YP_005879248.1| carbamoyl-phosphate synthase large chain [Neisseria meningitidis
            8013]
 gi|261393196|emb|CAX50815.1| carbamoyl-phosphate synthase large chain (carbamoyl-phosphate
            synthetase ammonia chain) [Neisseria meningitidis 8013]
          Length = 1071

 Score = 1251 bits (3236), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 623/1070 (58%), Positives = 794/1070 (74%), Gaps = 22/1070 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTDL+ ILI+GAGPIVIGQACEFDYSG QACKAL+EEGY+VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDLKSILIIGAGPIVIGQACEFDYSGAQACKALREEGYKVILVNSNPATIMTDPEMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  + VE+++ KERPDA+LPTMGGQTALN A+ LA +G L KY VELIGA  DA
Sbjct: 63   VTYIEPIMWQTVEKIIAKERPDAILPTMGGQTALNCALDLARNGVLAKYNVELIGATEDA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  FK+AM+ IG+  P S + +T++E ++   ++G FP +IRP+FT+GG+GGGI
Sbjct: 123  IDKAEDRGRFKEAMEKIGLSCPKSFVCHTMNEALAAQEQVG-FPTLIRPSFTMGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYNK+EF AIC+ G  AS T ++L+E+S+LGWKEYE+EV+RD  DN +IICSIEN DPMG
Sbjct: 182  AYNKDEFLAICERGFDASPTHELLIEQSVLGWKEYEMEVVRDKNDNCIIICSIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGV  GGSNVQFAVNP +GE++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQIMRNASLAVLREIGVNTGGSNVQFAVNPENGEMIVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VG++LD++ NDIT  KTPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGFTLDELRNDITGGKTPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            FAFEKFP ++  LTTQMKSVGE MA+GRT QESFQKALR LE G  G+   +      D 
Sbjct: 362  FAFEKFPAADDRLTTQMKSVGEVMAMGRTIQESFQKALRGLETGLCGFNPRS-----SDK 416

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
             +++  L  P P+RM  +  A + G  ++EIHE+  ID WFL Q ++L+  E+ +    +
Sbjct: 417  AEIRRELANPGPERMLFVADAFRAGFTLEEIHEICAIDPWFLAQIEDLMKEEKAVSDGIL 476

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
            S++       +KR+GFSDK++A     +EKEVRE R +L + P YKRVDTCAAEF   T 
Sbjct: 477  SDLDFAALRRLKRKGFSDKRLAQLLNVSEKEVREHRYALKLHPVYKRVDTCAAEFATETA 536

Query: 627  YMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSN 686
            Y+YS+Y+ ECES P+ +KKV+ILGGGPNRIGQGIEFDYCC H + +L+ +G+ETIM+N N
Sbjct: 537  YLYSTYEEECESRPSDRKKVMILGGGPNRIGQGIEFDYCCVHAALALRESGFETIMVNCN 596

Query: 687  PETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHR 746
            PETVSTD+DTSDRLYFEPLT+EDVL ++  E P G+IV +GGQTPLKL+           
Sbjct: 597  PETVSTDFDTSDRLYFEPLTLEDVLEIVRTENPWGVIVHYGGQTPLKLA----------- 645

Query: 747  LPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEIG 806
              +A  +  V I GTS DSIDAAEDRERF  ++ +L + QP   IA +E +AL  A+EIG
Sbjct: 646  --NALVENGVNIIGTSADSIDAAEDRERFQKVLNDLGLRQPPNRIAHNEEEALVKAEEIG 703

Query: 807  YPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALAD 866
            YP+VVRPSYVLGGRAM+IV++ E L  Y+  AV+V  + PVL+D +L++AIE+DVD ++D
Sbjct: 704  YPLVVRPSYVLGGRAMQIVHSAEQLQKYMREAVQVSEDSPVLLDFFLNNAIEVDVDCVSD 763

Query: 867  SCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNC 926
               +VVIGGIM+H+EQAG+HSGDS C +P  ++S    D I   T  +A  L V GLMN 
Sbjct: 764  G-KDVVIGGIMQHVEQAGIHSGDSGCSLPPYSLSEEIQDEIRRQTKAMAYALGVVGLMNV 822

Query: 927  QYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPKH 986
            Q+A+   G V++LE NPRASRTVPFVSKA G PLAK  A  M+G SL + G  KE++P  
Sbjct: 823  QFAV-QDGVVFVLEVNPRASRTVPFVSKATGVPLAKVGARCMAGISLKEQGVEKEIVPDF 881

Query: 987  VSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVFL 1046
             +VKEAV PF KF G D +LGPEMRSTGEVMG+  SF  A+ KAQ+ AG++L  +G +FL
Sbjct: 882  YAVKEAVFPFIKFPGVDTILGPEMRSTGEVMGVGASFGEAYYKAQLGAGERLNPTGKIFL 941

Query: 1047 SLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVAN 1106
            S+ +  K  + + AK F  +G+ I +T GTA +L   G+ V+ + K+ EGRPH GD + N
Sbjct: 942  SVREEDKERVIKTAKNFQALGYGICATRGTAQYLTEHGLIVQTINKVPEGRPHIGDALKN 1001

Query: 1107 GQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRS 1156
            G+I ++V T S D     D   +R+  L  +VP  TT +G  A +E  +S
Sbjct: 1002 GEIALVVNTVSSDPQSVSDSHIIRQSALQQRVPQYTTTAGGEAMSEGAKS 1051


>gi|261365571|ref|ZP_05978454.1| carbamoyl-phosphate synthase, large subunit [Neisseria mucosa ATCC
            25996]
 gi|288565894|gb|EFC87454.1| carbamoyl-phosphate synthase, large subunit [Neisseria mucosa ATCC
            25996]
          Length = 1071

 Score = 1251 bits (3236), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 623/1070 (58%), Positives = 796/1070 (74%), Gaps = 22/1070 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTDL+ ILI+GAGPIVIGQACEFDYSG QACKAL+EEGY+VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDLKSILIIGAGPIVIGQACEFDYSGAQACKALREEGYKVILVNSNPATIMTDPEMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  + VE+++ KERPDA+LPTMGGQTALN A+ LA +G L KY VELIGA  DA
Sbjct: 63   VTYIEPIMWQTVEKIIAKERPDAILPTMGGQTALNCALDLARNGVLAKYNVELIGATEDA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  FK+AM+ IG+  P S + +T++E ++   ++G FP +IRP+FT+GG+GGGI
Sbjct: 123  IDKAEDRGRFKEAMEKIGLSCPKSFVCHTMNEALAAQEQVG-FPTLIRPSFTMGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYNK+EF AIC+ G  AS T ++L+E+S+LGWKEYE+EV+RD ADN +IICSIEN DPMG
Sbjct: 182  AYNKDEFLAICERGFDASPTHELLIEQSVLGWKEYEMEVVRDKADNCIIICSIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGV+ GGSNVQFAVNP +GE++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQIMRNASLAVLREIGVDTGGSNVQFAVNPENGEMIVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VG++LD++ NDIT  +TPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGFTLDELRNDITGGRTPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            FAFEKFP ++  LTTQMKSVGE MA+GRT QESFQKALR LE G  G+   +      D 
Sbjct: 362  FAFEKFPAADDRLTTQMKSVGEVMAMGRTIQESFQKALRGLETGLCGFNPRS-----SDK 416

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
             +++  L  P P+RM  +  A + G  ++EIHE+  ID WFL Q ++L+  EQ +    +
Sbjct: 417  AEIRRELANPGPERMLFVADAFRAGFTLEEIHEICAIDPWFLAQIEDLVKEEQQVSAGCL 476

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
             ++       +KR+GFSDK+IA      EKEVRE R +L + P YKRVDTCAAEF   T 
Sbjct: 477  QDLDFAALRRLKRKGFSDKRIAQLLGVKEKEVREHRYALKLHPVYKRVDTCAAEFATETA 536

Query: 627  YMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSN 686
            Y+YS+Y+ ECE+ P+ +KKV+ILGGGPNRIGQGIEFDYCC H + +L+ +G+ETIM+N N
Sbjct: 537  YLYSTYEEECEARPSDRKKVMILGGGPNRIGQGIEFDYCCVHAALALRESGFETIMVNCN 596

Query: 687  PETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHR 746
            PETVSTD+DTSDRLYFEPLT+EDVL ++  E P G+IV +GGQTPLKL+           
Sbjct: 597  PETVSTDFDTSDRLYFEPLTLEDVLEIVRTENPWGVIVHYGGQTPLKLA----------- 645

Query: 747  LPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEIG 806
              +A  +  V I GTS DSIDAAEDRERF  ++ +L + QP   IA +E +AL  A+EIG
Sbjct: 646  --NALVENGVNIIGTSADSIDAAEDRERFQKVLNDLGLRQPPNRIAHNEEEALVKAEEIG 703

Query: 807  YPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALAD 866
            YP+VVRPSYVLGGRAM++V++ E L  Y+  AV+V  + PVL+D +L++AIE+DVD ++D
Sbjct: 704  YPLVVRPSYVLGGRAMQVVHSAEELQKYMREAVQVSEDSPVLLDFFLNNAIEVDVDCVSD 763

Query: 867  SCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNC 926
               +VVIGGIM+H+EQAG+HSGDS C +P  ++S    D I   T  +A  L V GLMN 
Sbjct: 764  G-KDVVIGGIMQHVEQAGIHSGDSGCSLPPYSLSEEIQDEIRRQTKAMAYALGVVGLMNV 822

Query: 927  QYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPKH 986
            Q+A+   G V++LE NPRASRTVPFVSKA G PLAK  A  M+G SL + G  KEV+P  
Sbjct: 823  QFAV-QDGVVFVLEVNPRASRTVPFVSKATGVPLAKVGARCMAGISLQEQGVEKEVVPDF 881

Query: 987  VSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVFL 1046
             +VKEAV PF KF G D +LGPEMRSTGEVMG+  SF  A+ KAQ+ AG++L  +G +FL
Sbjct: 882  YAVKEAVFPFIKFPGVDTILGPEMRSTGEVMGVGASFGEAYYKAQLGAGERLNPTGKIFL 941

Query: 1047 SLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVAN 1106
            ++ D  KP + + A+ F  +G+ + +T GTA +L+  GI V+ V K+ EGRPH  D + N
Sbjct: 942  AVRDEDKPLIVKTAQNFQALGYGVCATRGTAEYLKEHGIIVQAVNKVQEGRPHIVDAIKN 1001

Query: 1107 GQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRS 1156
            G+I ++V T S  +    D   +RR  L  +VP  TT++G  A +E  +S
Sbjct: 1002 GEIALVVNTVSSSAQSISDSHSIRRTSLTQRVPQYTTIAGGEAMSEGAKS 1051


>gi|385337413|ref|YP_005891286.1| carbamoyl-phosphate synthase large chain [Neisseria meningitidis WUE
            2594]
 gi|433476276|ref|ZP_20433611.1| carbamoyl-phosphate synthase, large subunit [Neisseria meningitidis
            88050]
 gi|433514166|ref|ZP_20470949.1| carbamoyl-phosphate synthase, large subunit [Neisseria meningitidis
            63049]
 gi|433515568|ref|ZP_20472339.1| carbamoyl-phosphate synthase, large subunit [Neisseria meningitidis
            2004090]
 gi|433518365|ref|ZP_20475104.1| carbamoyl-phosphate synthase, large subunit [Neisseria meningitidis
            96023]
 gi|433524782|ref|ZP_20481437.1| carbamoyl-phosphate synthase, large subunit [Neisseria meningitidis
            97020]
 gi|433527623|ref|ZP_20484235.1| carbamoyl-phosphate synthase, large subunit [Neisseria meningitidis
            NM3652]
 gi|433531123|ref|ZP_20487703.1| carbamoyl-phosphate synthase, large subunit [Neisseria meningitidis
            NM3642]
 gi|433532010|ref|ZP_20488577.1| carbamoyl-phosphate synthase, large subunit [Neisseria meningitidis
            2007056]
 gi|433535305|ref|ZP_20491837.1| carbamoyl-phosphate synthase, large subunit [Neisseria meningitidis
            2001212]
 gi|319409827|emb|CBY90135.1| carbamoyl-phosphate synthase large chain (carbamoyl-phosphate
            synthetase ammonia chain) [Neisseria meningitidis WUE
            2594]
 gi|432208131|gb|ELK64110.1| carbamoyl-phosphate synthase, large subunit [Neisseria meningitidis
            88050]
 gi|432245654|gb|ELL01119.1| carbamoyl-phosphate synthase, large subunit [Neisseria meningitidis
            63049]
 gi|432251675|gb|ELL07038.1| carbamoyl-phosphate synthase, large subunit [Neisseria meningitidis
            96023]
 gi|432253679|gb|ELL09020.1| carbamoyl-phosphate synthase, large subunit [Neisseria meningitidis
            2004090]
 gi|432257833|gb|ELL13126.1| carbamoyl-phosphate synthase, large subunit [Neisseria meningitidis
            97020]
 gi|432264564|gb|ELL19766.1| carbamoyl-phosphate synthase, large subunit [Neisseria meningitidis
            NM3642]
 gi|432266523|gb|ELL21706.1| carbamoyl-phosphate synthase, large subunit [Neisseria meningitidis
            NM3652]
 gi|432268655|gb|ELL23822.1| carbamoyl-phosphate synthase, large subunit [Neisseria meningitidis
            2007056]
 gi|432269937|gb|ELL25085.1| carbamoyl-phosphate synthase, large subunit [Neisseria meningitidis
            2001212]
          Length = 1071

 Score = 1251 bits (3236), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 623/1070 (58%), Positives = 795/1070 (74%), Gaps = 22/1070 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTDL+ ILI+GAGPIVIGQACEFDYSG QACKAL+EEGY+VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDLKSILIIGAGPIVIGQACEFDYSGAQACKALREEGYKVILVNSNPATIMTDPEMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  + VE+++ KERPDA+LPTMGGQTALN A+ LA +G L KY VELIGA  DA
Sbjct: 63   VTYIEPIMWQTVEKIIAKERPDAILPTMGGQTALNCALDLARNGVLAKYNVELIGATEDA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  FK+AM+ IG+  P S + +T++E ++   ++G FP +IRP+FT+GG+GGGI
Sbjct: 123  IDKAEDRGRFKEAMEKIGLSCPKSFVCHTMNEALAAQEQVG-FPTLIRPSFTMGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYNK+EF AIC+ G  AS T ++L+E+S+LGWKEYE+EV+RD  DN +IICSIEN DPMG
Sbjct: 182  AYNKDEFLAICERGFDASPTHELLIEQSVLGWKEYEMEVVRDKNDNCIIICSIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGV+ GGSNVQFAVNP +GE++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQIMRNASLAVLREIGVDTGGSNVQFAVNPENGEMIVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VG++LD++ NDIT  KTPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGFTLDELRNDITGGKTPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            FAFEKFP ++  LTTQMKSVGE MA+GRT QESFQKALR LE G  G+   +      D 
Sbjct: 362  FAFEKFPAADDRLTTQMKSVGEVMAMGRTIQESFQKALRGLETGLCGFNPRS-----SDK 416

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
             +++  L  P P+RM  +  A + G  ++EIHE+  ID WFL Q ++L+  E+ +    +
Sbjct: 417  AEIRRELANPGPERMLFVADAFRAGFTLEEIHEICAIDPWFLAQIEDLMKEEKAVSDGIL 476

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
            S++       +KR+GFSDK++A     +EKEVRE R +L + P YKRVDTCAAEF   T 
Sbjct: 477  SDLDFAALRRLKRKGFSDKRLAQLLNVSEKEVREHRYALKLHPVYKRVDTCAAEFATETA 536

Query: 627  YMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSN 686
            Y+YS+Y+ ECE+ P+ +KKV+ILGGGPNRIGQGIEFDYCC H + +L+ +G+ETIM+N N
Sbjct: 537  YLYSTYEEECEARPSDRKKVMILGGGPNRIGQGIEFDYCCVHAALALRESGFETIMVNCN 596

Query: 687  PETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHR 746
            PETVSTD+DTSDRLYFEPLT+EDVL ++  E P G+IV +GGQTPLKL+           
Sbjct: 597  PETVSTDFDTSDRLYFEPLTLEDVLEIVRTENPWGVIVHYGGQTPLKLA----------- 645

Query: 747  LPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEIG 806
              +A  +  V I GTS DSIDAAEDRERF  ++ +L + QP   IA +E +AL  A+EIG
Sbjct: 646  --NALVENGVNIIGTSADSIDAAEDRERFQKVLNDLGLRQPPNRIAHNEEEALVKAEEIG 703

Query: 807  YPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALAD 866
            YP+VVRPSYVLGGRAM+IV++ E L  Y+  AV+V  + PVL+D +L++AIE+DVD ++D
Sbjct: 704  YPLVVRPSYVLGGRAMQIVHSAEQLQKYMREAVQVSEDSPVLLDFFLNNAIEVDVDCVSD 763

Query: 867  SCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNC 926
               +VVIGGIM+H+EQAG+HSGDS C +P  ++S    D I   T  +A  L V GLMN 
Sbjct: 764  G-KDVVIGGIMQHVEQAGIHSGDSGCSLPPYSLSEEIQDEIRRQTKAMAYALGVVGLMNV 822

Query: 927  QYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPKH 986
            Q+A+   G V++LE NPRASRTVPFVSKA G PLAK  A  M+G SL + G  KEV+P  
Sbjct: 823  QFAV-QDGVVFVLEVNPRASRTVPFVSKATGVPLAKVGARCMAGISLKEQGVEKEVVPDF 881

Query: 987  VSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVFL 1046
             +VKEAV PF KF G D +LGPEMRSTGEVMG+  SF  A+ KAQ+ AG++L  +G +FL
Sbjct: 882  YAVKEAVFPFIKFPGVDTILGPEMRSTGEVMGVGASFGEAYYKAQLGAGERLNPTGKIFL 941

Query: 1047 SLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVAN 1106
            S+ +  K  + + AK F  +G+ I +T GTA +L   G+ V+ + K+ EGRPH GD + N
Sbjct: 942  SVREEDKERVIKTAKNFQALGYGICATRGTAQYLTEHGLIVQTINKVPEGRPHIGDALKN 1001

Query: 1107 GQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRS 1156
            G+I ++V T S D     D   +R+  L  +VP  TT +G  A +E  +S
Sbjct: 1002 GEIALVVNTVSSDPQSVSDSHIIRQSALQQRVPQYTTTAGGEAMSEGAKS 1051


>gi|421545174|ref|ZP_15991238.1| carbamoyl-phosphate synthase large chain [Neisseria meningitidis
            NM140]
 gi|421547222|ref|ZP_15993260.1| carbamoyl-phosphate synthase large chain [Neisseria meningitidis
            NM183]
 gi|421548194|ref|ZP_15994222.1| carbamoyl-phosphate synthase large chain [Neisseria meningitidis
            NM2781]
 gi|421553427|ref|ZP_15999389.1| carbamoyl-phosphate synthase large chain [Neisseria meningitidis
            NM576]
 gi|254672417|emb|CBA05752.1| carbamoyl-phosphate synthase large chain [Neisseria meningitidis
            alpha275]
 gi|402321251|gb|EJU56726.1| carbamoyl-phosphate synthase large chain [Neisseria meningitidis
            NM140]
 gi|402321585|gb|EJU57058.1| carbamoyl-phosphate synthase large chain [Neisseria meningitidis
            NM183]
 gi|402326916|gb|EJU62314.1| carbamoyl-phosphate synthase large chain [Neisseria meningitidis
            NM2781]
 gi|402328104|gb|EJU63484.1| carbamoyl-phosphate synthase large chain [Neisseria meningitidis
            NM576]
          Length = 1071

 Score = 1251 bits (3236), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 624/1070 (58%), Positives = 794/1070 (74%), Gaps = 22/1070 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTDL+ ILI+GAGPIVIGQACEFDYSG QACKAL+EEGY+VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDLKSILIIGAGPIVIGQACEFDYSGAQACKALREEGYKVILVNSNPATIMTDPEMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  + VE+++ KERPDA+LPTMGGQTALN A+ LA +G L KY VELIGA  DA
Sbjct: 63   VTYIEPIMWQTVEKIIAKERPDAILPTMGGQTALNCALDLARNGVLAKYNVELIGATEDA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  FK+AM+ IG+  P S + +T++E ++   ++G FP +IRP+FT+GG+GGGI
Sbjct: 123  IDKAEDRGRFKEAMEKIGLSCPKSFVCHTMNEALAAQEQVG-FPTLIRPSFTMGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYNK+EF AIC+ G  AS T ++L+E+S+LGWKEYE+EV+RD  DN +IICSIEN DPMG
Sbjct: 182  AYNKDEFLAICERGFDASPTHELLIEQSVLGWKEYEMEVVRDKNDNCIIICSIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGV  GGSNVQFAVNP +GE++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQIMRNASLAVLREIGVNTGGSNVQFAVNPENGEMIVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VG++LD++ NDIT  KTPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGFTLDELRNDITGGKTPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            FAFEKFP ++  LTTQMKSVGE MA+GRT QESFQKALR LE G  G+   +      D 
Sbjct: 362  FAFEKFPAADDRLTTQMKSVGEVMAMGRTIQESFQKALRGLETGLCGFNPRS-----SDK 416

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
             +++  L  P P+RM  +  A + G  ++EIHE+  ID WFL Q ++L+  E+ +    +
Sbjct: 417  AEIRRELANPGPERMLFVADAFRAGFTLEEIHEICAIDPWFLAQIEDLMKEEKAVSDGIL 476

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
            S++       +KR+GFSDK++A     +EKEVRE R +L + P YKRVDTCAAEF   T 
Sbjct: 477  SDLDFAALRRLKRKGFSDKRLAQLLNVSEKEVREHRYALKLHPVYKRVDTCAAEFATETA 536

Query: 627  YMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSN 686
            Y+YS+Y+ ECES P+ +KKV+ILGGGPNRIGQGIEFDYCC H + +L+ +G+ETIM+N N
Sbjct: 537  YLYSTYEEECESRPSDRKKVMILGGGPNRIGQGIEFDYCCVHAALALRESGFETIMVNCN 596

Query: 687  PETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHR 746
            PETVSTD+DTSDRLYFEPLT+EDVL ++  E P G+IV +GGQTPLKL+           
Sbjct: 597  PETVSTDFDTSDRLYFEPLTLEDVLEIVRTENPWGVIVHYGGQTPLKLA----------- 645

Query: 747  LPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEIG 806
              +A  +  V I GTS DSIDAAEDRERF  ++ +L + QP   IA +E +AL  A+EIG
Sbjct: 646  --NALVENGVNIIGTSADSIDAAEDRERFQKVLNDLGLRQPPNRIAHNEEEALVKAEEIG 703

Query: 807  YPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALAD 866
            YP+VVRPSYVLGGRAM+IV++ E L  Y+  AV+V  + PVL+D +L++AIE+DVD ++D
Sbjct: 704  YPLVVRPSYVLGGRAMQIVHSAEALQKYMREAVQVSEDSPVLLDFFLNNAIEVDVDCVSD 763

Query: 867  SCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNC 926
               +VVIGGIM+H+EQAG+HSGDS C +P  ++S    D I   T  +A  L V GLMN 
Sbjct: 764  G-KDVVIGGIMQHVEQAGIHSGDSGCSLPPYSLSEEIQDEIRRQTKAMAYALGVVGLMNV 822

Query: 927  QYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPKH 986
            Q+A+   G V++LE NPRASRTVPFVSKA G PLAK  A  M+G SL + G  KEV+P  
Sbjct: 823  QFAV-QDGVVFVLEVNPRASRTVPFVSKATGVPLAKVGARCMAGISLKEQGVEKEVVPDF 881

Query: 987  VSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVFL 1046
             +VKEAV PF KF G D +LGPEMRSTGEVMG+  SF  A+ KAQ+ AG++L  +G +FL
Sbjct: 882  YAVKEAVFPFIKFPGVDTILGPEMRSTGEVMGVGASFGEAYYKAQLGAGERLNPTGKIFL 941

Query: 1047 SLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVAN 1106
            S+ +  K  + + AK F  +G+ I +T GTA +L   G+ V+ + K+ EGRPH GD + N
Sbjct: 942  SVREEDKERVIKTAKNFQVLGYGICATRGTAQYLTEHGLIVQTINKVPEGRPHIGDALKN 1001

Query: 1107 GQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRS 1156
            G+I ++V T S D     D   +R+  L  +VP  TT +G  A +E  +S
Sbjct: 1002 GEIALVVNTVSSDPQSVSDSHIIRQSALQQRVPQYTTTAGGEAMSEGAKS 1051


>gi|440739562|ref|ZP_20919073.1| carbamoyl phosphate synthase large subunit [Pseudomonas fluorescens
            BRIP34879]
 gi|447918367|ref|YP_007398935.1| carbamoyl phosphate synthase large subunit [Pseudomonas poae
            RE*1-1-14]
 gi|440379394|gb|ELQ15990.1| carbamoyl phosphate synthase large subunit [Pseudomonas fluorescens
            BRIP34879]
 gi|445202230|gb|AGE27439.1| carbamoyl phosphate synthase large subunit [Pseudomonas poae
            RE*1-1-14]
          Length = 1073

 Score = 1250 bits (3235), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 624/1088 (57%), Positives = 803/1088 (73%), Gaps = 28/1088 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILILGAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPDMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  + V +++EKERPDALLPTMGGQTALN A+ L   G LEK+GVE+IGA  D 
Sbjct: 63   ATYIEPIKWQTVAKIIEKERPDALLPTMGGQTALNCALDLEREGVLEKFGVEMIGANADT 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  F +AMK+IG+  P SGI ++++E  ++  ++G FP IIRP+FT+GGTGGGI
Sbjct: 123  IDKAEDRSRFDKAMKSIGLDCPRSGIAHSMEEANAVLEKLG-FPCIIRPSFTMGGTGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEFE IC  GL  S T ++L+++SL+GWKEYE+EV+RD  DN +I+CSIEN DPMG
Sbjct: 182  AYNREEFEEICARGLDLSPTKELLIDESLIGWKEYEMEVVRDKKDNCIIVCSIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGVE GGSNVQF + P  G ++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQIMRNASLAVLREIGVETGGSNVQFGICPDTGRMVVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIA++AAKL++GY+LD++ N+IT   TPASFEPSIDYVVTK+PR
Sbjct: 302  PRVSRSSALASKATGFPIARIAAKLAIGYTLDELQNEITGGATPASFEPSIDYVVTKLPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            FAFEKF  ++  LTTQMKSVGE MA+GRTFQES QKALR LE G  G      ++LD   
Sbjct: 362  FAFEKFAKADARLTTQMKSVGEVMAIGRTFQESLQKALRGLEVGVCGLD----EKLDLSN 417

Query: 507  EQ----LKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLL 562
             +    LK  L VP  +R+  +  A + G+ V++I  ++ ID WFL Q ++LI  E+ + 
Sbjct: 418  PESMSVLKRELTVPGAERIWYVADAFRAGLSVEDIFGMNMIDPWFLVQIEDLIKEEEKVK 477

Query: 563  TQSVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFE 622
            T  +S++ +D  + +KR+GFSD+++A     TEK +R  R  L + P YKRVDTCAAEF 
Sbjct: 478  TLGLSSIDRDLMFRLKRKGFSDQRLAKLLGVTEKNLRTHRHKLDIFPVYKRVDTCAAEFA 537

Query: 623  ANTPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIM 682
             +T YMYS+Y+ ECE+AP+ + K++ILGGGPNRIGQGIEFDYCC H + +L+  GYETIM
Sbjct: 538  TDTAYMYSTYEEECEAAPSGRDKIMILGGGPNRIGQGIEFDYCCVHAALALREDGYETIM 597

Query: 683  MNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYL 742
            +N NPETVSTDYDTSDRLYFEP+T+EDVL +  +E+P+G+IVQ+GGQTPLKL+       
Sbjct: 598  VNCNPETVSTDYDTSDRLYFEPVTLEDVLEICRVEKPKGVIVQYGGQTPLKLA------- 650

Query: 743  DEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIA 802
               R   A+G   V I GTSPD+ID AEDRERF  +++ L++ QP     +SE +A+  A
Sbjct: 651  ---RALEAAG---VPIIGTSPDAIDRAEDRERFQQMVERLNLRQPPNATVRSEDEAIRAA 704

Query: 803  KEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVD 862
             +IGYP+VVRPSYVLGGRAMEIVY +E L  YL +AV+V  + PVL+D +L+ AIE+DVD
Sbjct: 705  SKIGYPLVVRPSYVLGGRAMEIVYEEEELKRYLRDAVKVSNDSPVLLDHFLNCAIEMDVD 764

Query: 863  ALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCG 922
            A+ D   +VVIG IM+HIEQAGVHSGDSAC +P  ++ +   D +     K+A  L V G
Sbjct: 765  AVCDGT-DVVIGAIMQHIEQAGVHSGDSACSLPPYSLPAHIQDEMREQVKKMALELGVVG 823

Query: 923  LMNCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEV 982
            LMN Q A+    D+Y++E NPRASRTVPFVSK IG  LA  AA VM+GK+L ++GFTKE+
Sbjct: 824  LMNVQLALQGE-DIYVIEVNPRASRTVPFVSKCIGVSLAMIAARVMAGKTLKEIGFTKEI 882

Query: 983  IPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSG 1042
            IP   SVKEAV PF KF G D +LGPEM+STGEVMG+  +F  AFAKAQ+ A + LP  G
Sbjct: 883  IPNFYSVKEAVFPFAKFPGVDPILGPEMKSTGEVMGVGDTFGEAFAKAQMGASEVLPTGG 942

Query: 1043 TVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGD 1102
            T F+S+ D  KP +  +A+  +++GF++V+T+GTA  +E  G+ V RV K+ EGRPH  D
Sbjct: 943  TAFISVRDDDKPLVAGVARDLINLGFEVVATAGTAKLIEAAGLKVRRVNKVTEGRPHVVD 1002

Query: 1103 MVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTV 1162
            M+ N ++ +++ T+ G      D   +RR  L +K+   TT++   A  EA++     TV
Sbjct: 1003 MIKNDEVTLIINTTEGRQ-SIADSYSIRRNALQHKIYCTTTIAAGEAICEALKFGPEKTV 1061

Query: 1163 TMTALQDF 1170
                LQD 
Sbjct: 1062 RR--LQDL 1067


>gi|416025173|ref|ZP_11568954.1| carbamoyl phosphate synthase large subunit [Pseudomonas syringae pv.
            glycinea str. race 4]
 gi|320329992|gb|EFW85979.1| carbamoyl phosphate synthase large subunit [Pseudomonas syringae pv.
            glycinea str. race 4]
          Length = 1073

 Score = 1250 bits (3235), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 626/1088 (57%), Positives = 799/1088 (73%), Gaps = 28/1088 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILILGAGPIVIGQACEFDYSG QAC+AL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIKSILILGAGPIVIGQACEFDYSGAQACRALREEGYRVILVNSNPATIMTDPAMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  + V +++EKERPDALLPTMGGQTALN A+ L   G LEK+GVE+IGA  D 
Sbjct: 63   ATYIEPIKWQTVAKIIEKERPDALLPTMGGQTALNCALDLEREGVLEKFGVEMIGANADT 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  F +AMK+IG+  P SGI ++++E  ++  ++G FP IIRP+FT+GGTGGGI
Sbjct: 123  IDKAEDRSRFDKAMKSIGLACPRSGIAHSMEEANAVLEKLG-FPCIIRPSFTMGGTGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEFE IC  GL  S T ++L+++SL+GWKEYE+EV+RD  DN +I+CSIEN DPMG
Sbjct: 182  AYNREEFEEICARGLDLSPTKELLIDESLIGWKEYEMEVVRDKKDNCIIVCSIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ LR+ S+A++REIGVE GGSNVQF + P  G ++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQILRNASLAVLREIGVETGGSNVQFGICPDTGRMVVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIA++AAKL+VGY+LD++ N+IT  KTPASFEPSIDYVVTK+PR
Sbjct: 302  PRVSRSSALASKATGFPIARVAAKLAVGYTLDELSNEITGGKTPASFEPSIDYVVTKLPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            FAFEKF  ++  LTTQMKSVGE MA+GRTFQES QKAL  LE G  G       +LD   
Sbjct: 362  FAFEKFAKADARLTTQMKSVGEVMAIGRTFQESLQKALSGLEVGVCGLD----PKLDLSH 417

Query: 507  EQ----LKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLL 562
             +    LK  L VP  +R+  +  A + GM V+EI  ++ ID WFL Q ++L+  E+ + 
Sbjct: 418  PESMSTLKRELTVPGAERIWYVADAFRAGMTVEEIFAMNMIDPWFLVQIEDLVKDEEKVK 477

Query: 563  TQSVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFE 622
            T  +S + +D  + +KR+GFSD ++A     TEK +R  R  L V P YKRVDTCAAEF 
Sbjct: 478  TLGLSAIDRDLMFRLKRKGFSDARLAKLVGVTEKNLRTHRHKLDVFPVYKRVDTCAAEFA 537

Query: 623  ANTPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIM 682
             +T Y+YS+Y+ ECE+ P+ + K++ILGGGPNRIGQGIEFDYCC H + +L+  GYETIM
Sbjct: 538  TDTAYLYSTYEEECEANPSARDKIMILGGGPNRIGQGIEFDYCCVHAALALREDGYETIM 597

Query: 683  MNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYL 742
            +N NPETVSTDYDTSDRLYFEP+T+EDVL ++ +E+P+G+IVQ+GGQTPLKL+       
Sbjct: 598  VNCNPETVSTDYDTSDRLYFEPVTLEDVLEIVRVEKPKGVIVQYGGQTPLKLA------- 650

Query: 743  DEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIA 802
               R   A+G   V I GTSPD+ID AEDRERF  +++ L++ QP     +SE +A+  A
Sbjct: 651  ---RALEAAG---VPIIGTSPDAIDRAEDRERFQQMVERLNLRQPPNATVRSEDEAIRAA 704

Query: 803  KEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVD 862
             +IGYP+VVRPSYVLGGRAMEIVY ++ L  YL  AV+V  + PVL+D +L+ AIE+DVD
Sbjct: 705  AKIGYPLVVRPSYVLGGRAMEIVYQEDELKRYLREAVQVSNDSPVLLDHFLNCAIEMDVD 764

Query: 863  ALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCG 922
            A+ D   +VVIG IM+HIEQAGVHSGDSAC +P  ++ +   D +     K+A  L V G
Sbjct: 765  AVCDGT-DVVIGAIMQHIEQAGVHSGDSACSLPPYSLPAHIQDEMREQVKKMALELGVVG 823

Query: 923  LMNCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEV 982
            LMN Q A+    D+Y++E NPRASRTVPFVSK IG  LA  AA VM+GK+L +L FTKE+
Sbjct: 824  LMNVQLALQGE-DIYVIEVNPRASRTVPFVSKCIGVSLAMIAARVMAGKTLKELNFTKEI 882

Query: 983  IPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSG 1042
            IP   SVKEAV PF KF G D +LGPEM+STGEVMG+  +F  AFAKAQ+ A + LP  G
Sbjct: 883  IPNFYSVKEAVFPFAKFPGVDPILGPEMKSTGEVMGVGDTFGEAFAKAQMGASEVLPTGG 942

Query: 1043 TVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGD 1102
            T F+S+ D  KP +E +A+  +++GF+IV+T+GTA  +E  G+ V RV K+ EGRPH  D
Sbjct: 943  TAFISVRDDDKPLVEAVARDLINLGFEIVATAGTAKLIEAAGLKVRRVNKVTEGRPHVVD 1002

Query: 1103 MVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTV 1162
            M+ N ++ +++ T+ G      D   +RR  L +K+   TT++   A  EA++     TV
Sbjct: 1003 MIKNDEVTLIINTTEGRQ-SIADSYSIRRNALQHKIYCTTTIAAGEAICEALKFGPEKTV 1061

Query: 1163 TMTALQDF 1170
                LQD 
Sbjct: 1062 RR--LQDL 1067


>gi|416214613|ref|ZP_11622977.1| carbamoyl-phosphate synthase, large subunit [Neisseria meningitidis
            M01-240013]
 gi|325143751|gb|EGC66068.1| carbamoyl-phosphate synthase, large subunit [Neisseria meningitidis
            M01-240013]
          Length = 1071

 Score = 1250 bits (3235), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 623/1070 (58%), Positives = 794/1070 (74%), Gaps = 22/1070 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTDL+ ILI+GAGPIVIGQACEFDYSG QACKAL+EEGY+VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDLKSILIIGAGPIVIGQACEFDYSGAQACKALREEGYKVILVNSNPATIMTDPEMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  + VE+++ KERPDA+LPTMGGQTALN A+ LA +G L KY VELIGA  DA
Sbjct: 63   VTYIEPIMWQTVEKIIAKERPDAILPTMGGQTALNCALDLARNGVLAKYNVELIGATEDA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  FK+AM+ IG+  P S + +T++E ++   ++G FP +IRP+FT+GG+GGGI
Sbjct: 123  IDKAEDRGRFKEAMEKIGLSCPKSFVCHTMNEALAAQEQVG-FPTLIRPSFTMGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYNK+EF AIC+ G  AS T ++L+E+S+LGWKEYE+EV+RD  DN +IICSIEN DPMG
Sbjct: 182  AYNKDEFLAICERGFDASPTHELLIEQSVLGWKEYEMEVVRDKNDNCIIICSIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGV+ GGSNVQFAVNP +GE++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQIMRNASLAVLREIGVDTGGSNVQFAVNPENGEMIVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VG+ LD++ NDIT  KTPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGFKLDELRNDITGGKTPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            FAFEKFP ++  LTTQMKSVGE MA+GRT QESFQKALR LE G  G+   +      D 
Sbjct: 362  FAFEKFPAADDRLTTQMKSVGEVMAMGRTIQESFQKALRGLETGLCGFNPRS-----SDK 416

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
             +++  L  P P+RM  +  A + G  ++EIHE+  ID WFL Q ++L+  E+ +    +
Sbjct: 417  AEIRRELANPGPERMLFVADAFRAGFTLEEIHEICAIDPWFLAQIEDLMKEEKAVSDGIL 476

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
            S++       +KR+GFSDK++A     +EKEVRE R +L + P YKRVDTCAAEF   T 
Sbjct: 477  SDLDFAALRRLKRKGFSDKRLAQLLNVSEKEVREHRYALKLHPVYKRVDTCAAEFATETA 536

Query: 627  YMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSN 686
            Y+YS+Y+ ECE+ P+ +KKV+ILGGGPNRIGQGIEFDYCC H + +L+ +G+ETIM+N N
Sbjct: 537  YLYSTYEEECEARPSDRKKVMILGGGPNRIGQGIEFDYCCVHAALALRESGFETIMVNCN 596

Query: 687  PETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHR 746
            PETVSTD+DTSDRLYFEPLT+EDVL ++  E P G+IV +GGQTPLKL+           
Sbjct: 597  PETVSTDFDTSDRLYFEPLTLEDVLEIVRTENPWGVIVHYGGQTPLKLA----------- 645

Query: 747  LPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEIG 806
              +A  +  V I GTS DSIDAAEDRERF  ++ +L + QP   IA +E +AL  A+EIG
Sbjct: 646  --NALVENGVNIIGTSADSIDAAEDRERFQKVLNDLGLRQPPNRIAHNEEEALVKAEEIG 703

Query: 807  YPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALAD 866
            YP+VVRPSYVLGGRAM+IV++ E L  Y+  AV+V  + PVL+D +L++AIE+DVD ++D
Sbjct: 704  YPLVVRPSYVLGGRAMQIVHSAEQLQKYMREAVQVSEDSPVLLDFFLNNAIEVDVDCVSD 763

Query: 867  SCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNC 926
               +VVIGGIM+H+EQAG+HSGDS C +P  ++S    D I   T  +A  L V GLMN 
Sbjct: 764  G-KDVVIGGIMQHVEQAGIHSGDSGCSLPPYSLSEEIQDEIRRQTKAMAYALGVVGLMNV 822

Query: 927  QYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPKH 986
            Q+A+   G V++LE NPRASRTVPFVSKA G PLAK  A  M+G SL + G  KEV+P  
Sbjct: 823  QFAV-QDGVVFVLEVNPRASRTVPFVSKATGVPLAKVGARCMAGISLKEQGVEKEVVPDF 881

Query: 987  VSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVFL 1046
             +VKEAV PF KF G D +LGPEMRSTGEVMG+  SF  A+ KAQ+ AG++L  +G +FL
Sbjct: 882  YAVKEAVFPFIKFPGVDTILGPEMRSTGEVMGVGASFGEAYYKAQLGAGERLNPTGKIFL 941

Query: 1047 SLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVAN 1106
            S+ +  K  + + AK F  +G+ I +T GTA +L   G+ V+ + K+ EGRPH GD + N
Sbjct: 942  SVREEDKERVIKTAKNFQALGYGICATRGTAQYLTEHGLIVQTINKVPEGRPHIGDALKN 1001

Query: 1107 GQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRS 1156
            G+I ++V T S D     D   +R+  L  +VP  TT +G  A +E  +S
Sbjct: 1002 GEIALVVNTVSSDPQSVSDSHIIRQSALQQRVPQYTTTAGGEAMSEGAKS 1051


>gi|387895667|ref|YP_006325964.1| carbamoyl-phosphate synthase large subunit [Pseudomonas fluorescens
            A506]
 gi|423693616|ref|ZP_17668136.1| carbamoyl-phosphate synthase, large subunit [Pseudomonas fluorescens
            SS101]
 gi|387162329|gb|AFJ57528.1| carbamoyl-phosphate synthase, large subunit [Pseudomonas fluorescens
            A506]
 gi|388002521|gb|EIK63850.1| carbamoyl-phosphate synthase, large subunit [Pseudomonas fluorescens
            SS101]
          Length = 1073

 Score = 1250 bits (3235), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 625/1088 (57%), Positives = 801/1088 (73%), Gaps = 28/1088 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILILGAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPAMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  + V +++EKERPDALLPTMGGQTALN A+ L   G LEK+GVE+IGA  D 
Sbjct: 63   ATYIEPIKWQTVAKIIEKERPDALLPTMGGQTALNCALDLEREGVLEKFGVEMIGANADT 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  F +AMK+IG+  P SGI ++++E  ++   +G FP IIRP+FT+GGTGGGI
Sbjct: 123  IDKAEDRSRFDKAMKSIGLACPRSGIAHSMEEANAVLETLG-FPCIIRPSFTMGGTGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEFE IC  GL  S T ++L+++SL+GWKEYE+EV+RD  DN +I+CSIEN DPMG
Sbjct: 182  AYNREEFEEICARGLDLSPTKELLIDESLIGWKEYEMEVVRDKKDNCIIVCSIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ LR+ S+A++REIGVE GGSNVQF + P  G ++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQILRNASLAVLREIGVETGGSNVQFGICPDTGRMVVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITK-KTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIA++AAKL++GY+LD++ N+IT    PASFEPSIDYVVTK+PR
Sbjct: 302  PRVSRSSALASKATGFPIARIAAKLAIGYTLDELQNEITGGAMPASFEPSIDYVVTKLPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            FAFEKF  ++  LTTQMKSVGE MA+GRTFQES QKALR LE G  G      ++LD   
Sbjct: 362  FAFEKFAKADARLTTQMKSVGEVMAIGRTFQESLQKALRGLEVGVCGLD----EKLDLSN 417

Query: 507  EQ----LKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLL 562
             +    LK  L VP  +R+  +  A + G+ V++I  ++ ID WFL Q ++LI  E+ + 
Sbjct: 418  PESMSILKRELTVPGAERIWYVADAFRAGLSVEDIFGMNMIDPWFLVQIEDLIKEEEKVK 477

Query: 563  TQSVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFE 622
            T  +S++ +D  + +KR+GFSD+++A     TEK +R  R  L + P YKRVDTCAAEF 
Sbjct: 478  TLGLSSIDRDLMFRLKRKGFSDQRLAKLLGVTEKNLRTHRHKLDIFPVYKRVDTCAAEFA 537

Query: 623  ANTPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIM 682
             +T YMYS+Y+ ECE+APT + K++ILGGGPNRIGQGIEFDYCC H + +L+  GYETIM
Sbjct: 538  TDTAYMYSTYEEECEAAPTGRDKIIILGGGPNRIGQGIEFDYCCVHAALALREDGYETIM 597

Query: 683  MNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYL 742
            +N NPETVSTDYDTSDRLYFEP+T+EDVL +  +E+P+G+IVQ+GGQTPLKL+       
Sbjct: 598  VNCNPETVSTDYDTSDRLYFEPVTLEDVLEICRVEKPKGVIVQYGGQTPLKLA------- 650

Query: 743  DEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIA 802
               R   A+G   V I GTSPD+ID AEDRERF  +++ L++ QP     +SE +A+  A
Sbjct: 651  ---RALEAAG---VPIIGTSPDAIDRAEDRERFQQMVERLNLRQPPNATVRSEDEAIRAA 704

Query: 803  KEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVD 862
             +IGYP+VVRPSYVLGGRAMEIVY +E L  YL +AV+V  + PVL+D +L+ AIE+DVD
Sbjct: 705  SKIGYPLVVRPSYVLGGRAMEIVYEEEELKRYLRDAVKVSNDSPVLLDHFLNCAIEMDVD 764

Query: 863  ALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCG 922
            A+ D   +VVIG IM+HIEQAGVHSGDSAC +P  ++ +   D +     K+A  L V G
Sbjct: 765  AVCDGT-DVVIGAIMQHIEQAGVHSGDSACSLPPYSLPAHIQDEMREQVKKMALELGVVG 823

Query: 923  LMNCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEV 982
            LMN Q A+    D+Y++E NPRASRTVPFVSK IG  LA  AA VM+GK+L ++GFTKE+
Sbjct: 824  LMNVQLALQGE-DIYVIEVNPRASRTVPFVSKCIGVSLAMIAARVMAGKTLKEIGFTKEI 882

Query: 983  IPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSG 1042
            IP   SVKEAV PF KF G D +LGPEM+STGEVMG+  +F  AFAKAQ+ A + LP  G
Sbjct: 883  IPNFYSVKEAVFPFAKFPGVDPILGPEMKSTGEVMGVGDTFGEAFAKAQMGASEVLPTGG 942

Query: 1043 TVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGD 1102
            T F+S+ D  KP +  +A+  +++GF++V+T+GTA  +E  G+ V RV K+ EGRPH  D
Sbjct: 943  TAFISVRDDDKPLVAGVARDLINLGFEVVATAGTAKLIEAAGLKVRRVNKVTEGRPHVVD 1002

Query: 1103 MVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTV 1162
            M+ N ++ +++ T+ G      D   +RR  L +K+   TT++   A  EA++     TV
Sbjct: 1003 MIKNDEVTLIINTTEGRQ-SIADSYSIRRNALQHKIYCTTTIAAGEAICEALKFGPEKTV 1061

Query: 1163 TMTALQDF 1170
                LQD 
Sbjct: 1062 RR--LQDL 1067


>gi|154252760|ref|YP_001413584.1| carbamoyl-phosphate synthase large subunit [Parvibaculum
            lavamentivorans DS-1]
 gi|154156710|gb|ABS63927.1| carbamoyl-phosphate synthase, large subunit [Parvibaculum
            lavamentivorans DS-1]
          Length = 1079

 Score = 1250 bits (3235), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 646/1096 (58%), Positives = 812/1096 (74%), Gaps = 31/1096 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ I+I+GAGPI+IGQACEFDYSGTQACKALK+EGY +IL+NSNPATIMTDP LAD
Sbjct: 3    KRTDIKSIMIIGAGPIIIGQACEFDYSGTQACKALKDEGYRIILVNSNPATIMTDPELAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+TPE+V +++EKERPDALLPTMGGQTALN A+ALA+ G LEK+GVE+IGAK +A
Sbjct: 63   ATYIEPITPEVVAKIIEKERPDALLPTMGGQTALNTALALADMGVLEKFGVEMIGAKREA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I+ AEDR LF+ AM  IG+++P S + + ++E ++    +G  P IIRP+FT+GGTGGGI
Sbjct: 123  IEMAEDRQLFRDAMDRIGLESPRSRVAHNMEEALAALEFVG-LPAIIRPSFTMGGTGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN++EF  I ++GL AS  ++VLVE+S+LGWKEYE+EV+RD ADN +IICSIENVDPMG
Sbjct: 182  AYNRQEFSDIIESGLDASPVNEVLVEESVLGWKEYEMEVVRDKADNCIIICSIENVDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPA TLTDKEYQ +R+ SIA++REIGVE GGSNVQFAVNP DG ++VIEMN
Sbjct: 242  VHTGDSITVAPALTLTDKEYQVMRNASIAVLREIGVETGGSNVQFAVNPKDGRLVVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRF 447
            PRVSRSSALASKATGFPIAK+AA+L+VGY+LD++ NDITK TPASFEP+IDYVVTKIPRF
Sbjct: 302  PRVSRSSALASKATGFPIAKVAARLAVGYTLDELRNDITKVTPASFEPTIDYVVTKIPRF 361

Query: 448  AFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDW--D 505
            AFEKF G+E LL T MKSVGEAMA+GRTFQES QKALRS+E G +G     V  +    D
Sbjct: 362  AFEKFAGAEKLLGTAMKSVGEAMAIGRTFQESLQKALRSMETGLTGLNEVTVPGMGEGDD 421

Query: 506  WEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQS 565
               ++ +L  P PDR+  I  A+++GM  D+I      D WF+ Q + LID E  +  + 
Sbjct: 422  KNAIRAALGRPTPDRLLVIAQALREGMSHDQIQASCSYDPWFIEQLQGLIDAEAEVRGKG 481

Query: 566  VSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANT 625
            +   TK +   +K  GFSD ++A   +S E+ VR+ R  +GV P YKR+DTCAAEFE+ T
Sbjct: 482  LPQ-TKAEMRRLKAMGFSDARLAELARSEEEAVRKARREMGVRPVYKRIDTCAAEFESLT 540

Query: 626  PYMYSSY--DF----ECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYE 679
            PYMYS+Y  DF    +CE+ P+ +KK +ILGGGPNRIGQGIEFDYCCCH +F+L   G E
Sbjct: 541  PYMYSTYETDFDGKADCEADPSGRKKAIILGGGPNRIGQGIEFDYCCCHAAFALAEIGIE 600

Query: 680  TIMMNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPE----GIIVQFGGQTPLKLS 735
            +IM+N NPETVSTDYDTSDRLYFEPLT EDVL +IDLE  +    G+IVQFGGQTPLKL+
Sbjct: 601  SIMVNCNPETVSTDYDTSDRLYFEPLTAEDVLELIDLEMSKGTLLGVIVQFGGQTPLKLA 660

Query: 736  LPIHQYLDEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSE 795
                  L+  ++P         I GTSPD+ID AEDR+RF+A++++L ++QP  GIA+S 
Sbjct: 661  ----NDLERAKVP---------ILGTSPDAIDLAEDRDRFSALLEKLGLKQPPNGIARSA 707

Query: 796  ADALAIAKEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSD 855
            A+A  IA+ IGYPVV+RPSYVLGGR MEIV     L  Y+  AV V  + PVLID YL D
Sbjct: 708  AEAKMIAERIGYPVVIRPSYVLGGRGMEIVRDAAHLDRYINEAVIVSGKSPVLIDYYLRD 767

Query: 856  AIEIDVDALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLA 915
            AIE+DVDAL D   +VVI GIMEHIE+AGVHSGDSAC +P  ++    +  I   T  +A
Sbjct: 768  AIEVDVDALCDG-KDVVICGIMEHIEEAGVHSGDSACSLPPYSLKRETIAEIERQTRDMA 826

Query: 916  KRLNVCGLMNCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLND 975
              LNV GLMN QYAI   G +Y+LE NPRASRTVPFV+K IG P+AK AA VM+G+SL  
Sbjct: 827  LALNVGGLMNVQYAI-QDGTIYVLEVNPRASRTVPFVAKVIGEPVAKIAAKVMAGESLAS 885

Query: 976  LGFTKEVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAG 1035
                 +     V+VKEAV PF +F G D +LGPEMRSTGEVMG+D SF +AFAK+Q+  G
Sbjct: 886  FNLKPDA-HGRVAVKEAVFPFARFPGVDTILGPEMRSTGEVMGLDRSFAVAFAKSQLGGG 944

Query: 1036 QKLPLSGTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHE 1095
             K+P++GTVF+S+ D  K  +   AK  LD+GFK+V+T GT  +L  +GI V  + K+ E
Sbjct: 945  TKVPVTGTVFVSVKDSDKAKIVAPAKKLLDMGFKLVATGGTQRYLAEQGIEVGTINKVLE 1004

Query: 1096 GRPHAGDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIR 1155
            GRPH  D + NG++ ++  T+ G      D + LRR  L  KVP  TTV+GA A  E I 
Sbjct: 1005 GRPHIVDAIKNGEVALVFNTTEGAQALS-DSMSLRRSALMMKVPYYTTVAGARAAVEGID 1063

Query: 1156 SLKSNTVTMTALQDFF 1171
            +++   + + +LQ + 
Sbjct: 1064 AIRKGQLEVASLQSYI 1079


>gi|398875589|ref|ZP_10630759.1| carbamoyl-phosphate synthase, large subunit [Pseudomonas sp. GM67]
 gi|398884394|ref|ZP_10639329.1| carbamoyl-phosphate synthase, large subunit [Pseudomonas sp. GM60]
 gi|398194552|gb|EJM81621.1| carbamoyl-phosphate synthase, large subunit [Pseudomonas sp. GM60]
 gi|398206811|gb|EJM93570.1| carbamoyl-phosphate synthase, large subunit [Pseudomonas sp. GM67]
          Length = 1073

 Score = 1250 bits (3235), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 623/1088 (57%), Positives = 804/1088 (73%), Gaps = 28/1088 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILILGAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPDMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  + V +++EKERPDALLPTMGGQTALN A+ L   G LEK+GVE+IGA  D 
Sbjct: 63   ATYIEPIKWQTVAKIIEKERPDALLPTMGGQTALNCALDLEREGVLEKFGVEMIGANADT 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  F +AMK+IG+  P SGI ++++E  ++   +G FP IIRP+FT+GGTGGGI
Sbjct: 123  IDKAEDRSRFDKAMKSIGLDCPRSGIAHSMEEANAVLERLG-FPCIIRPSFTMGGTGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEFE IC  GL  S T ++L+++SL+GWKEYE+EV+RD  DN +I+CSIEN DPMG
Sbjct: 182  AYNREEFEEICARGLDLSPTKELLIDESLIGWKEYEMEVVRDKKDNCIIVCSIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGVE GGSNVQF + P  G ++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQIMRNASLAVLREIGVETGGSNVQFGICPDTGRMVVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIA++AAKL++GY+LD++ N+IT   TPASFEPSIDYVVTK+PR
Sbjct: 302  PRVSRSSALASKATGFPIARIAAKLAIGYTLDELQNEITGGATPASFEPSIDYVVTKLPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            FAFEKFP ++  LTTQMKSVGE MA+GRTFQES QKALR LE G  G      ++LD   
Sbjct: 362  FAFEKFPKADARLTTQMKSVGEVMAIGRTFQESLQKALRGLEVGVCGLD----EKLDLGN 417

Query: 507  EQ----LKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLL 562
             +    LK  L VP  +R+  +  A + G+ V++I  ++ ID WFL Q ++LI  E+ + 
Sbjct: 418  PESMSILKRELTVPGAERIWYVADAFRAGLSVEDIFGMNMIDPWFLVQIEDLIKEEEKVK 477

Query: 563  TQSVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFE 622
            T  ++++ +D  +++KR+GFSD ++A     TEK +R  R  L + P YKRVDTCAAEF 
Sbjct: 478  TLGLASIDRDLMFKLKRKGFSDMRLAKLLGVTEKALRRHRHKLEIFPVYKRVDTCAAEFA 537

Query: 623  ANTPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIM 682
             +T YMYS+Y+ ECE+AP+ + K++ILGGGPNRIGQGIEFDYCC H + +L+  GYETIM
Sbjct: 538  TDTAYMYSTYEEECEAAPSGRDKIMILGGGPNRIGQGIEFDYCCVHAALALREDGYETIM 597

Query: 683  MNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYL 742
            +N NPETVSTDYDTSDRLYFEP+T+EDVL +  +E+P+G+IVQ+GGQTPLKL+    + L
Sbjct: 598  VNCNPETVSTDYDTSDRLYFEPVTLEDVLEICRVEKPKGVIVQYGGQTPLKLA----RAL 653

Query: 743  DEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIA 802
            +E  +P         I GTSPD+ID AEDRERF  +++ L++ QP     +SE +A+  A
Sbjct: 654  EEAGVP---------IIGTSPDAIDRAEDRERFQQMVERLNLRQPPNATVRSEDEAIRAA 704

Query: 803  KEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVD 862
             +IGYP+VVRPSYVLGGRAMEIVY +E L  YL +AV+V  + PVL+D +L+ AIE+DVD
Sbjct: 705  AKIGYPLVVRPSYVLGGRAMEIVYEEEELKRYLRDAVKVSNDSPVLLDHFLNCAIEMDVD 764

Query: 863  ALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCG 922
            A+ D   +VVIG IM+HIEQAGVHSGDSAC +P  ++ +   D +     K+A  L V G
Sbjct: 765  AVCDGT-DVVIGAIMQHIEQAGVHSGDSACSLPPYSLPAHIQDEMREQVKKMALELGVVG 823

Query: 923  LMNCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEV 982
            LMN Q A+    D+Y++E NPRASRTVPFVSK IG  LA  AA VM+GK+L ++GFTKE+
Sbjct: 824  LMNVQLALQGE-DIYVIEVNPRASRTVPFVSKCIGVSLAMIAARVMAGKTLKEIGFTKEI 882

Query: 983  IPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSG 1042
            IP   SVKEAV PF KF G D +LGPEM+STGEVMG+  +F  AFAKAQ+ A + LP  G
Sbjct: 883  IPNFYSVKEAVFPFAKFPGVDPILGPEMKSTGEVMGVGDTFGEAFAKAQMGASEVLPTGG 942

Query: 1043 TVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGD 1102
            T F+S+ D  KP +  +A+  +++GF++V+T+GTA  +E  G+ V RV K+ EGRPH  D
Sbjct: 943  TAFISVRDDDKPLVAGVARDLINLGFEVVATAGTAKLIEAAGLKVRRVNKVTEGRPHVVD 1002

Query: 1103 MVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTV 1162
            M+ N ++ +++ T+ G      D   +RR  L +K+   TT++   A  EA++     TV
Sbjct: 1003 MIKNDEVTLIINTTEGRQ-SIADSYSIRRNALQHKIYCTTTIAAGEAICEALKFGPEKTV 1061

Query: 1163 TMTALQDF 1170
                LQD 
Sbjct: 1062 RR--LQDL 1067


>gi|338983180|ref|ZP_08632405.1| CarB [Acidiphilium sp. PM]
 gi|338207889|gb|EGO95801.1| CarB [Acidiphilium sp. PM]
          Length = 1081

 Score = 1250 bits (3235), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 624/1093 (57%), Positives = 814/1093 (74%), Gaps = 28/1093 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILI+GAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP LAD
Sbjct: 3    KRTDIKSILIIGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPELAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+TPE+VE+++ KERPDA+LPTMGGQTALN A+ALA++G LEK+GVELIGA+ + 
Sbjct: 63   ATYIEPITPEMVEKIIIKERPDAVLPTMGGQTALNTAMALAKAGTLEKHGVELIGARAEV 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I +AEDR  F+ AM  IG+++P S I +T+DE  +  + +G  P +IRP+FTLGGTGGGI
Sbjct: 123  IDRAEDRLKFRDAMAEIGIESPRSAIAHTMDEARAALDLVG-LPAVIRPSFTLGGTGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEF  I   GL AS T++VL+E+S+LGWKEYE+EV+RD ADN +I+CSIEN+DPMG
Sbjct: 182  AYNREEFLEIVAGGLDASPTTEVLIEESVLGWKEYEMEVVRDRADNCIIVCSIENIDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDS+TVAPA TLTD+EYQ +RD SIA +R+IGV+ GGSNVQF VNP DG +++IEMN
Sbjct: 242  VHTGDSVTVAPALTLTDREYQLMRDASIACLRKIGVDTGGSNVQFGVNPADGRMVIIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRF 447
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT+ TPASFEP+IDYVV KIPRF
Sbjct: 302  PRVSRSSALASKATGFPIAKIAAKLAVGYTLDELRNDITRVTPASFEPTIDYVVIKIPRF 361

Query: 448  AFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDWE 507
             FEKFPG+  LLTT MKSVGEAMA+GR+F E+ QK LRSLE G +G      K  D   +
Sbjct: 362  TFEKFPGTPALLTTSMKSVGEAMAIGRSFPEALQKGLRSLETGLAGLDPVE-KPGDGTRD 420

Query: 508  QLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSVS 567
              + +L  P PDR+     A++ G+ V+EIH     D WFL Q +++++ E+ +  + + 
Sbjct: 421  AFRAALSTPRPDRLLIAAEALRAGLSVEEIHAACKFDPWFLRQMEDIVEAERRVAAEGLP 480

Query: 568  NMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTPY 627
               +     +K  GFSD+++A  T  +E +V + RL+LGV P Y+R+D+   EF + T Y
Sbjct: 481  G-DELGMRALKALGFSDRRLAALTGRSEADVSKARLALGVTPVYRRIDSTGGEFASATSY 539

Query: 628  MYSSYDFE-----CESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIM 682
            M+++Y+       CE+ P++++KV+ILGGGPNRIGQGIEFDYCC H +++L+ AG+ETIM
Sbjct: 540  MFATYEGGFGAPVCEAEPSERRKVVILGGGPNRIGQGIEFDYCCVHAAYALREAGFETIM 599

Query: 683  MNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGI----IVQFGGQTPLKLSLPI 738
            +N NPETVSTDYDTSDRLYFEPL  EDVL+++  E+  G     IVQ+GGQTPLKLS   
Sbjct: 600  VNCNPETVSTDYDTSDRLYFEPLFAEDVLSLLRREQERGTLLGCIVQYGGQTPLKLS--- 656

Query: 739  HQYLDEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADA 798
             Q L E  +P         I GTS D+IDAAEDRERF+ +++ L + QP+ G+A+S   A
Sbjct: 657  -QALAEAGIP---------ILGTSADAIDAAEDRERFHDLLRSLGLRQPENGLARSAEQA 706

Query: 799  LAIAKEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIE 858
             AI + IG+PVV+RPSYVLGGRAMEIVY   +L  Y+  AV V    PVLID+YL+DAIE
Sbjct: 707  EAIVERIGFPVVIRPSYVLGGRAMEIVYDLASLRRYMREAVVVSGTNPVLIDRYLNDAIE 766

Query: 859  IDVDALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRL 918
            +DVD +AD   +V + G+MEHIE+AG+HSGDSAC +P  ++S + +  + + T  +AK L
Sbjct: 767  VDVDCIADG-QSVYVAGVMEHIEEAGIHSGDSACSLPPYSLSPAIVAELRAETEAMAKAL 825

Query: 919  NVCGLMNCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGF 978
            NV GLMN Q+AI    +VY+LE NPRASRTVPFV+KA G P+AK  A VM+G++L   G 
Sbjct: 826  NVIGLMNVQFAIQGE-NVYVLEVNPRASRTVPFVAKATGVPVAKIGARVMAGEALASFGL 884

Query: 979  TKEVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKL 1038
               V+  HV+VKEAV PF +F G DVLLGPEM+STGEVMG+D+SF  AFAKAQ+ AG KL
Sbjct: 885  DDSVMRSHVAVKEAVFPFARFSGVDVLLGPEMKSTGEVMGLDVSFARAFAKAQLGAGVKL 944

Query: 1039 PLSGTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRP 1098
            P +GTVFLS+ D  KP +  IA+ F+D+GF+I++T GTA  L   GIA   V K+ EGRP
Sbjct: 945  PQAGTVFLSVRDSDKPAILAIARRFVDLGFEIMATRGTAAHLSEAGIAARAVNKVLEGRP 1004

Query: 1099 HAGDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLK 1158
            H  D + +G++Q+++ T+SG +    D   +RR+ L + VP  TT++GA A + AI +L 
Sbjct: 1005 HCVDSIRSGEVQLVINTASG-AQTVADSFDIRRQALNHGVPHYTTIAGARAASHAIAALA 1063

Query: 1159 SNTVTMTALQDFF 1171
            + ++ +  LQ +F
Sbjct: 1064 AGSLEVAPLQSYF 1076


>gi|225076110|ref|ZP_03719309.1| hypothetical protein NEIFLAOT_01142 [Neisseria flavescens
            NRL30031/H210]
 gi|224952554|gb|EEG33763.1| hypothetical protein NEIFLAOT_01142 [Neisseria flavescens
            NRL30031/H210]
          Length = 1071

 Score = 1250 bits (3235), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 622/1070 (58%), Positives = 795/1070 (74%), Gaps = 22/1070 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTDL+ ILI+GAGPIVIGQACEFDYSG QACKAL+EEGY+VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDLKSILIIGAGPIVIGQACEFDYSGAQACKALREEGYKVILVNSNPATIMTDPEMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  + VE+++ KERPDA+LPTMGGQTALN A+ LA +G L KY VELIGA  DA
Sbjct: 63   VTYIEPIMWQTVEKIIAKERPDAILPTMGGQTALNCALDLARNGVLAKYNVELIGATEDA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  FK+AM+ IG+  P S + +T++E ++   ++G FP +IRP+FT+GG+GGGI
Sbjct: 123  IDKAEDRGRFKEAMEKIGLSCPKSFVCHTMNEALAAQEQVG-FPTLIRPSFTMGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYNK+EF AIC+ G  AS T ++L+E+S+LGWKEYE+EV+RD  DN +IICSIEN DPMG
Sbjct: 182  AYNKDEFLAICERGFDASPTHELLIEQSVLGWKEYEMEVVRDKNDNCIIICSIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGV+ GGSNVQFAVNP +GE++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQIMRNASLAVLREIGVDTGGSNVQFAVNPENGEMIVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VG++LD++ NDIT  +TPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGFTLDELRNDITGGRTPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            FAFEKFP ++  LTTQMKSVGE MA+GRT QESFQKALR LE G  G+   +      D 
Sbjct: 362  FAFEKFPAADDRLTTQMKSVGEVMAMGRTIQESFQKALRGLETGLCGFNPRS-----SDK 416

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
             +++  L  P P+RM  +  A + G  ++EIHE+  ID WFL Q ++L+  E+ +    +
Sbjct: 417  AEIRRELANPGPERMLFVADAFRAGFTLEEIHEICAIDPWFLAQIEDLMKEEKAVSDGIL 476

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
            S++       +KR+GFSDK++A     +EKEVRE R +L + P YKRVDTCAAEF   T 
Sbjct: 477  SDLDFAALRRLKRKGFSDKRLAQLLNVSEKEVREHRYALKLHPVYKRVDTCAAEFATETA 536

Query: 627  YMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSN 686
            Y+YS+Y+ ECE+ P+ +KKV+ILGGGPNRIGQGIEFDYCC H + +L+ +G+ETIM+N N
Sbjct: 537  YLYSTYEEECEARPSDRKKVMILGGGPNRIGQGIEFDYCCVHAALALRESGFETIMVNCN 596

Query: 687  PETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHR 746
            PETVSTD+DTSDRLYFEPLT+EDVL ++  E P G+IV +GGQTPLKL+           
Sbjct: 597  PETVSTDFDTSDRLYFEPLTLEDVLEIVRTENPWGVIVHYGGQTPLKLA----------- 645

Query: 747  LPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEIG 806
              +A  +  V I GTS DSIDAAEDRERF  ++ +L + QP   IA +E +AL  A+EIG
Sbjct: 646  --NALVENGVNIIGTSADSIDAAEDRERFQKVLNDLGLRQPPNRIAHNEEEALVRAEEIG 703

Query: 807  YPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALAD 866
            YP+VVRPSYVLGGRAM+IV++ E L  Y+  AV+V  + PVL+D +L++AIE+DVD ++D
Sbjct: 704  YPLVVRPSYVLGGRAMQIVHSAEALQKYMREAVQVSEDSPVLLDFFLNNAIEVDVDCVSD 763

Query: 867  SCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNC 926
               +VVIGGIM+H+EQAG+HSGDS C +P  ++S    D I   T  +A  L V GLMN 
Sbjct: 764  G-KDVVIGGIMQHVEQAGIHSGDSGCSLPPYSLSEEIQDEIRRQTKAMAYALGVVGLMNV 822

Query: 927  QYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPKH 986
            Q+A+   G V++LE NPRASRTVPFVSKA G PLAK  A  M+G SL + G  KEV+P  
Sbjct: 823  QFAV-QDGVVFVLEVNPRASRTVPFVSKATGVPLAKVGARCMAGISLKEQGVEKEVVPDF 881

Query: 987  VSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVFL 1046
             +VKEAV PF KF G D +LGPEMRSTGEVMG+  SF  A+ KAQ+ AG++L  +G +FL
Sbjct: 882  YAVKEAVFPFIKFPGVDTILGPEMRSTGEVMGVGASFGEAYYKAQLGAGERLNTTGKIFL 941

Query: 1047 SLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVAN 1106
            S+ +  K  + + AK F  +G+ I +T GTA +L   G+ V+ + K+ EGRPH GD + N
Sbjct: 942  SVREEDKERVIKTAKNFQVLGYGICATRGTAQYLTEHGLIVQTINKVPEGRPHIGDALKN 1001

Query: 1107 GQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRS 1156
            G+I ++V T S D     D   +R+  L  +VP  TT +G  A +E  +S
Sbjct: 1002 GEIALVVNTVSSDPQSVSDSHIIRQSALQQRVPQYTTTAGGEAMSEGAKS 1051


>gi|241763932|ref|ZP_04761974.1| carbamoyl-phosphate synthase, large subunit [Acidovorax delafieldii
            2AN]
 gi|241366755|gb|EER61196.1| carbamoyl-phosphate synthase, large subunit [Acidovorax delafieldii
            2AN]
          Length = 1081

 Score = 1250 bits (3235), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 638/1081 (59%), Positives = 799/1081 (73%), Gaps = 30/1081 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ +LI+GAGPI+IGQACEFDYSG QACKAL+EEGY+VILINSNPATIMTDP  AD
Sbjct: 3    KRTDIKSVLIIGAGPIIIGQACEFDYSGVQACKALREEGYKVILINSNPATIMTDPATAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+T + VE+++ KERPDA+LPTMGGQTALN A+ L  +G L+KY VELIGA  +A
Sbjct: 63   VTYIEPITWQTVEKIIAKERPDAILPTMGGQTALNCALDLWHNGVLDKYKVELIGATPEA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  FK AM  IG+ +  SGI +++DE  ++   +G FP +IRP+FTLGGTGGGI
Sbjct: 123  IDKAEDRLKFKDAMTKIGLGSARSGIAHSMDEAWAVQKSVG-FPTVIRPSFTLGGTGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN EEFE ICK GL AS T+++L+E+SLLGWKEYE+EV+RD ADN ++ICSIEN+DPMG
Sbjct: 182  AYNPEEFETICKRGLEASPTNELLIEESLLGWKEYEMEVVRDKADNCIVICSIENLDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGV+ GGSNVQF+VNP DG ++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQIMRNASLAVLREIGVDTGGSNVQFSVNPKDGRMIVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ N+IT   TPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGYTLDELKNEITGGATPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            FAFEKFP ++  LTTQMKSVGE MA+GRTFQESFQKALR LE G  G     + E   D 
Sbjct: 362  FAFEKFPTADSRLTTQMKSVGEVMAMGRTFQESFQKALRGLEVGVDG-----MNEKTQDR 416

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVE----QFLL 562
            E L+  L  P P+R+  +  A   G+ VDE+H+L+ IDKWFL Q +E++ +E    Q   
Sbjct: 417  ELLEKELGEPGPERIWYVGDAFAMGLSVDEVHDLTKIDKWFLVQIEEIVKIELELDQLAA 476

Query: 563  TQSVSNMTKDD---FYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAA 619
             +    +   D      +K++GFSD+++A   K++EK VR++R + GV P YKRVDTCAA
Sbjct: 477  EKGEGALAAIDAATLRALKKKGFSDRRLAKLLKTSEKAVRDQRRAHGVRPVYKRVDTCAA 536

Query: 620  EFEANTPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYE 679
            EF  NT YMYS+Y+ ECE+APT KKK+++LGGGPNRIGQGIEFDYCC H + +++  GYE
Sbjct: 537  EFATNTAYMYSTYEEECEAAPTSKKKIMVLGGGPNRIGQGIEFDYCCVHAALAMREDGYE 596

Query: 680  TIMMNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIH 739
            TIM+N NPETVSTDYDTSDRLYFEPLT+EDVL ++D E+P G+IVQ+GGQTPLKL+L + 
Sbjct: 597  TIMVNCNPETVSTDYDTSDRLYFEPLTLEDVLEIVDKEKPVGVIVQYGGQTPLKLALGLE 656

Query: 740  QYLDEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADAL 799
                      A G   V I GT+PD IDAAEDRERF A++ +L + QP    A++E +AL
Sbjct: 657  ----------AEG---VPIIGTTPDMIDAAEDRERFQALLHQLQLRQPPNATARTEPEAL 703

Query: 800  AIAKEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEI 859
              A  +GYP+VVRPSYVLGGRAMEIV+    L  Y+  AV+V  + PVL+D++LS+AIE 
Sbjct: 704  EKAAALGYPLVVRPSYVLGGRAMEIVHEQRDLERYMREAVKVSNDSPVLLDRFLSNAIEC 763

Query: 860  DVDALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLN 919
            DVD + DS G   IGG+MEHIEQAGVHSGDSAC +P   +S + +D I   T  +A+ LN
Sbjct: 764  DVDCVRDSTGVTFIGGVMEHIEQAGVHSGDSACSLPPYYLSKATVDEIKRQTAAMAEGLN 823

Query: 920  VCGLMNCQYAITTSGD---VYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDL 976
            V GLMN Q+AI  +     +Y+LE NPRASRTVPFVSKA G  LAK AA  M+G++L   
Sbjct: 824  VVGLMNVQFAIQEADGKDIIYVLEVNPRASRTVPFVSKATGIQLAKVAARCMAGQTLAAQ 883

Query: 977  GFTKEVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQ 1036
            G TKEV P + SVKEAV PF KF G D +LGPEM+STGEVMG+  +F  AF K+Q+ AG 
Sbjct: 884  GITKEVTPPYFSVKEAVFPFVKFPGVDTILGPEMKSTGEVMGVGKTFGEAFVKSQLGAGT 943

Query: 1037 KLPLSGTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEG 1096
            KLP SG VFL++ +  KP    IA+  + +GF++V+T GTA  +   G+ V  V K+ EG
Sbjct: 944  KLPTSGKVFLTVKNGDKPRAVAIARDLVSMGFELVATKGTAAAIAEAGVPVAVVNKVTEG 1003

Query: 1097 RPHAGDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRS 1156
            RPH  DM+ N +I M++ T         D   +R   L  +V   TT+ GA A  E ++ 
Sbjct: 1004 RPHIVDMIKNDEIAMVINTVEERRNAIADSRAIRTSSLLARVTTFTTIFGAEAAVEGMKY 1063

Query: 1157 L 1157
            L
Sbjct: 1064 L 1064


>gi|387128718|ref|YP_006297323.1| carbamoyl-phosphate synthase large subunit [Methylophaga sp. JAM1]
 gi|386275780|gb|AFI85678.1| Carbamoyl-phosphate synthase large chain [Methylophaga sp. JAM1]
          Length = 1072

 Score = 1250 bits (3235), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 619/1054 (58%), Positives = 789/1054 (74%), Gaps = 18/1054 (1%)

Query: 86   LGKRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGL 145
            + KRTD++ ILILGAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +
Sbjct: 1    MAKRTDIQSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPNM 60

Query: 146  ADRTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKL 205
            AD TYI P+T E V +V+E ERPDA+LPTMGGQTALN A+ L + G LEKYGVE+IGA  
Sbjct: 61   ADATYIEPVTWEAVSKVIEVERPDAILPTMGGQTALNCALDLEKHGVLEKYGVEMIGADS 120

Query: 206  DAIKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGG 265
            +AI KAEDRDLF+ AM+ IG+  P S I ++L+E + +  + G FP+IIRP+FT+GG+GG
Sbjct: 121  EAINKAEDRDLFRAAMRKIGLDMPQSDIAHSLEEALEVQQKFG-FPVIIRPSFTMGGSGG 179

Query: 266  GIAYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDP 325
            GIAYN+E+F  IC+ GL  S TS++L+E+S++GWKEYE+EV+RD  DN +IICSIEN D 
Sbjct: 180  GIAYNREDFVDICQRGLYLSPTSELLIEESIIGWKEYEMEVVRDKKDNAIIICSIENFDA 239

Query: 326  MGVHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIE 385
            MGVHTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGVE GGSNVQFAVNP  G +++IE
Sbjct: 240  MGVHTGDSITVAPAQTLTDKEYQIMRNASLAVLREIGVETGGSNVQFAVNPETGRLIIIE 299

Query: 386  MNPRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKI 444
            MNPRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ N+IT   TP SFEP+IDYVVTKI
Sbjct: 300  MNPRVSRSSALASKATGFPIAKVAAKLAVGYTLDELQNEITGNATPTSFEPTIDYVVTKI 359

Query: 445  PRFAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDW 504
            PRF FEKFP ++  L+TQMKSVGE MA+GR FQES QKALR LE    G+      + + 
Sbjct: 360  PRFTFEKFPLADNRLSTQMKSVGEVMAIGRNFQESLQKALRGLETDRDGFNEILDLKAEN 419

Query: 505  DWEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQ 564
              E L+  L +P  DR+  +  A + GM  DE+ +L+ ID WFL Q +EL+++E  L  +
Sbjct: 420  TAEVLRRELSLPGSDRLWYVGDAFRYGMSFDEVQQLTHIDPWFLIQIQELVEIEHQLKER 479

Query: 565  SVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEAN 624
            S++++ + +   +KR+GF+D ++A     TEK+ R  R +LGV P YKRVDTCAAEF  +
Sbjct: 480  SLNDIDEAEMRALKRKGFADSRLAKLLHKTEKQFRSHRHALGVRPVYKRVDTCAAEFSTS 539

Query: 625  TPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMN 684
            T YMYS+YD ECE+ PT + K++ILGGGPNRIGQGIEFDYCC H + +L+  GYETIM+N
Sbjct: 540  TAYMYSTYDEECEANPTDRDKIMILGGGPNRIGQGIEFDYCCVHAALALREDGYETIMVN 599

Query: 685  SNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDE 744
             NPETVSTDYDTSDRLYFE LT+EDVL ++ LE+P+G+IVQFGGQTPLKL+         
Sbjct: 600  CNPETVSTDYDTSDRLYFESLTLEDVLEIVALEKPKGVIVQFGGQTPLKLA--------- 650

Query: 745  HRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKE 804
             R   A+G   V I GTSPD+ID AEDRERF  ++++L + QP   +A S   A+++A E
Sbjct: 651  -RALEAAG---VPIIGTSPDAIDHAEDRERFQQMVEKLGLLQPPNRLAHSVDTAVSLAAE 706

Query: 805  IGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDAL 864
            IGYP+VVRPSYVLGGRAMEIVY +E L  Y+  AV V  + PVL+D++L DAIE+DVDA+
Sbjct: 707  IGYPLVVRPSYVLGGRAMEIVYNEEELQRYMLTAVSVSNDSPVLLDRFLDDAIEVDVDAI 766

Query: 865  ADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLM 924
             D    V+IGGIMEHIEQAGVHSGDSAC +P  ++S   +D +     ++A  L V GLM
Sbjct: 767  CDG-KEVLIGGIMEHIEQAGVHSGDSACALPPYSLSHEIMDKLRVQVKQMALELGVVGLM 825

Query: 925  NCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIP 984
            N Q+AI     +++LE NPRASRTVP+VSK+IG PLAK AA  M+G SL + G T+EVIP
Sbjct: 826  NTQFAIQGE-RIFILEVNPRASRTVPYVSKSIGVPLAKVAARCMAGMSLAEQGVTEEVIP 884

Query: 985  KHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTV 1044
             + SVKEAV PF KFQG D +LGPEM+STGEVMG+  +F  AFAK+Q+AA   LP+ G  
Sbjct: 885  SYFSVKEAVFPFIKFQGVDPILGPEMKSTGEVMGVGRTFGEAFAKSQLAASVSLPVGGKA 944

Query: 1045 FLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMV 1104
            F+S+ D  K  + +IAK  L +GF +++T GT   L    +  ERV K+ EG+PH  DM+
Sbjct: 945  FISVRDADKQSVIKIAKDLLGLGFSLLATRGTQQTLIEADVPCERVKKVAEGQPHIVDMI 1004

Query: 1105 ANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKV 1138
             N +I ++V T+ G     +D  ++RR  L ++V
Sbjct: 1005 KNDEIALIVNTTEGRQA-VVDSREIRRAALQHQV 1037


>gi|421543103|ref|ZP_15989200.1| carbamoyl-phosphate synthase large chain [Neisseria meningitidis
            NM255]
 gi|402315309|gb|EJU50873.1| carbamoyl-phosphate synthase large chain [Neisseria meningitidis
            NM255]
          Length = 1071

 Score = 1250 bits (3234), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 622/1070 (58%), Positives = 795/1070 (74%), Gaps = 22/1070 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTDL+ ILI+GAGPIVIGQACEFDYSG QACKAL+EEGY+VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDLKSILIIGAGPIVIGQACEFDYSGAQACKALREEGYKVILVNSNPATIMTDPEMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  + VE+++ KERPDA+LPTMGGQTALN A+ LA +G L KY VELIGA  DA
Sbjct: 63   VTYIEPIMWQTVEKIIAKERPDAILPTMGGQTALNCALDLARNGVLAKYNVELIGATEDA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  FK+AM+ IG+  P S + +T++E ++   ++G FP +IRP+FT+GG+GGGI
Sbjct: 123  IDKAEDRGRFKEAMEKIGLSCPKSFVCHTMNEALAAQEQVG-FPTLIRPSFTMGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYNK+EF AIC+ G  AS T ++L+E+S+LGWKEYE+EV+RD  DN +IICSIEN DPMG
Sbjct: 182  AYNKDEFLAICERGFDASPTHELLIEQSVLGWKEYEMEVVRDKNDNCIIICSIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGV+ GGSNVQFA+NP +GE++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQIMRNASLAVLREIGVDTGGSNVQFAMNPENGEMIVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VG++LD++ NDIT  KTPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGFTLDELRNDITGGKTPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            FAFEKFP ++  LTTQMKSVGE MA+GRT QESFQKALR LE G  G+   +      D 
Sbjct: 362  FAFEKFPAADDRLTTQMKSVGEVMAMGRTIQESFQKALRGLETGLCGFNPRS-----SDK 416

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
             +++  L  P P+RM  +  A + G  ++EIHE+  ID WFL Q ++L+  E+ +    +
Sbjct: 417  AEIRRELANPGPERMLFVADAFRAGFTLEEIHEICAIDPWFLAQIEDLMKEEKAVSDGIL 476

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
            S++       +KR+GFSDK++A     +EKEVRE R +L + P YKRVDTCAAEF   T 
Sbjct: 477  SDLDFAALRRLKRKGFSDKRLAQLLNVSEKEVREHRYALKLHPVYKRVDTCAAEFATETA 536

Query: 627  YMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSN 686
            Y+YS+Y+ ECE+ P+ +KKV+ILGGGPNRIGQGIEFDYCC H + +L+ +G+ETIM+N N
Sbjct: 537  YLYSTYEEECEARPSDRKKVMILGGGPNRIGQGIEFDYCCVHAALALRESGFETIMVNCN 596

Query: 687  PETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHR 746
            PETVSTD+DTSDRLYFEPLT+EDVL ++  E P G+IV +GGQTPLKL+           
Sbjct: 597  PETVSTDFDTSDRLYFEPLTLEDVLEIVRTENPWGVIVHYGGQTPLKLA----------- 645

Query: 747  LPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEIG 806
              +A  +  V I GTS DSIDAAEDRERF  ++ +L + QP   IA +E +AL  A+EIG
Sbjct: 646  --NALVENGVNIIGTSADSIDAAEDRERFQKVLNDLGLRQPPNRIAHNEEEALVKAEEIG 703

Query: 807  YPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALAD 866
            YP+VVRPSYVLGGRAM+IV++ E L  Y+  AV+V  + PVL+D +L++AIE+DVD ++D
Sbjct: 704  YPLVVRPSYVLGGRAMQIVHSAEQLQKYMREAVQVSEDSPVLLDFFLNNAIEVDVDCVSD 763

Query: 867  SCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNC 926
               +VVIGGIM+H+EQAG+HSGDS C +P  ++S    D I   T  +A  L V GLMN 
Sbjct: 764  G-KDVVIGGIMQHVEQAGIHSGDSGCSLPPYSLSEEIQDEIRRQTKAMAYALGVVGLMNV 822

Query: 927  QYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPKH 986
            Q+A+   G V++LE NPRASRTVPFVSKA G PLAK  A  M+G SL + G  KEV+P  
Sbjct: 823  QFAV-QDGVVFVLEVNPRASRTVPFVSKATGVPLAKVGARCMAGISLKEQGVEKEVVPDF 881

Query: 987  VSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVFL 1046
             +VKEAV PF KF G D +LGPEMRSTGEVMG+  SF  A+ KAQ+ AG++L  +G +FL
Sbjct: 882  YAVKEAVFPFIKFPGVDTILGPEMRSTGEVMGVGASFGEAYYKAQLGAGERLNPTGKIFL 941

Query: 1047 SLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVAN 1106
            S+ +  K  + + AK F  +G+ I +T GTA +L   G+ V+ + K+ EGRPH GD + N
Sbjct: 942  SVREEDKERVIKTAKNFQALGYGICATRGTAQYLTEHGLIVQTINKVPEGRPHIGDALKN 1001

Query: 1107 GQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRS 1156
            G+I ++V T S D     D   +R+  L  +VP  TT +G  A +E  +S
Sbjct: 1002 GEIALVVNTVSSDPQSVSDSHIIRQSALQQRVPQYTTTAGGEAMSEGAKS 1051


>gi|392548669|ref|ZP_10295806.1| carbamoyl phosphate synthase large subunit [Pseudoalteromonas rubra
            ATCC 29570]
          Length = 1072

 Score = 1250 bits (3234), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 626/1067 (58%), Positives = 784/1067 (73%), Gaps = 18/1067 (1%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTDL  ILILGAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDLNSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  E+VE+++EKE+PDA+LPTMGGQTALN A+ L + G L K+GVELIGA  DA
Sbjct: 63   ATYIEPIHWEVVEKIIEKEKPDAVLPTMGGQTALNCALDLDKHGVLAKHGVELIGATADA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAE+R+ F  AMK IG++ P + I +++DE   + + IG FP IIRP+FT+GGTGGG+
Sbjct: 123  IDKAENRERFDVAMKNIGLECPRAEIAHSMDEAHDVLSRIG-FPCIIRPSFTMGGTGGGV 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN EEF+ IC  GL  S T+++L+++SLLGWKEYE+EV+RD  DN +I+CSIEN DPMG
Sbjct: 182  AYNMEEFDEICTRGLDLSPTNELLIDESLLGWKEYEMEVVRDKNDNCIIVCSIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGVE GGSNVQF VNP DG +++IEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQIMRNASMAVLREIGVETGGSNVQFGVNPDDGRMVIIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITK-KTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT   TPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKIAAKLAVGYTLDELQNDITGGATPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            F FEKF G+   LTTQMKSVGE MA+GR  QES QKALR LE G +G       +     
Sbjct: 362  FNFEKFAGANDRLTTQMKSVGEVMAIGRNQQESLQKALRGLEVGATGLNPIVALDDPKAK 421

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
            E +   LR P  +R+  I  AM+ GM V+E+ EL+ +D+W+L Q ++++  E  +    +
Sbjct: 422  ETIIRELREPGAERIWYIADAMRHGMSVEEVFELTKVDRWYLVQIEDILKDEATIAEVGM 481

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
            + + KD    +KR+GFSD +IA     +EKE+R+KR  L ++P YKRVDTCAAEF ++T 
Sbjct: 482  AGLNKDFLRRLKRKGFSDPRIAEIAGVSEKEIRKKRHQLDILPVYKRVDTCAAEFSSDTA 541

Query: 627  YMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSN 686
            YMYSSYD ECE+AP+ K K++++GGGPNRIGQGIEFDYCC H + +++  GYETIM+N N
Sbjct: 542  YMYSSYDEECEAAPSDKDKIMVIGGGPNRIGQGIEFDYCCVHAALAMREDGYETIMVNCN 601

Query: 687  PETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHR 746
            PETVSTDYDTSDRL+FEP+T+EDVL ++ +E+P+G+IVQ+GGQTPLKL+          R
Sbjct: 602  PETVSTDYDTSDRLFFEPITLEDVLEIVRVEKPKGVIVQYGGQTPLKLA----------R 651

Query: 747  LPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEIG 806
               A+G   V + GTSPD+ID AEDRERF  +++ L + QP+     S  +A+A ++EIG
Sbjct: 652  DLEANG---VPVIGTSPDAIDRAEDRERFQQLVERLDLLQPENATVTSLEEAIAKSQEIG 708

Query: 807  YPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALAD 866
            +P+VVRPSYVLGGRAMEIVY ++ L  Y+  AV V  E PVL+D++L DAIE+DVDA+ D
Sbjct: 709  FPLVVRPSYVLGGRAMEIVYDEDDLRRYMTEAVSVSNEAPVLLDRFLDDAIEVDVDAICD 768

Query: 867  SCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNC 926
               NV+IGGIMEHIEQAGVHSGDSAC +P  ++S    D +      +A  L V GLMN 
Sbjct: 769  G-ENVIIGGIMEHIEQAGVHSGDSACSLPAHSLSQEIQDVMRKQVRDMALELGVVGLMNT 827

Query: 927  QYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPKH 986
            Q+A+   G VYL+E NPRA+RTVPFVSKA G  LAK AA  M G+SL   G TKEVIP +
Sbjct: 828  QFAV-KDGQVYLIEVNPRAARTVPFVSKATGVALAKVAARCMVGQSLESQGVTKEVIPPY 886

Query: 987  VSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVFL 1046
             SVKE VLPF KFQG D + GPEMRSTGEVMG+  +F  AFAKAQ+ A   LP  G   L
Sbjct: 887  YSVKEVVLPFAKFQGVDPMRGPEMRSTGEVMGVGENFAEAFAKAQLGASNALPRGGRALL 946

Query: 1047 SLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVAN 1106
            S+ +  K  +  +AK    IGF++ +T GTA  LE  GI V RV K+ EGRPH  D + N
Sbjct: 947  SVRNGDKARVVELAKTMKAIGFELDATKGTAQALEDAGIEVRRVNKVFEGRPHILDRIKN 1006

Query: 1107 GQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEA 1153
            G+   +V T+ G    + D   LRR  L +K    TT++ A AN  A
Sbjct: 1007 GEYSYIVNTTEGRQAIE-DSKVLRRGALQHKTNYTTTLNAAFANCTA 1052



 Score =  240 bits (613), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 152/422 (36%), Positives = 242/422 (57%), Gaps = 24/422 (5%)

Query: 67  KIDS-SAELSNGAA---SSKDQKL-GKRTDLRKILILGAGPIVIGQACEFDYSGTQACKA 121
           ++D+ +AE S+  A   SS D++     +D  KI+++G GP  IGQ  EFDY    A  A
Sbjct: 528 RVDTCAAEFSSDTAYMYSSYDEECEAAPSDKDKIMVIGGGPNRIGQGIEFDYCCVHAALA 587

Query: 122 LKEEGYEVILINSNPATIMTDPGLADRTYITPMTPELVEQVLEKERPDALLPTMGGQTAL 181
           ++E+GYE I++N NP T+ TD   +DR +  P+T E V +++  E+P  ++   GGQT L
Sbjct: 588 MREDGYETIMVNCNPETVSTDYDTSDRLFFEPITLEDVLEIVRVEKPKGVIVQYGGQTPL 647

Query: 182 NLAVALAESGALEKYGVELIGAKLDAIKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECI 241
            LA        LE  GV +IG   DAI +AEDR+ F+Q ++ + +  P +    +L+E I
Sbjct: 648 KLA------RDLEANGVPVIGTSPDAIDRAEDRERFQQLVERLDLLQPENATVTSLEEAI 701

Query: 242 SIANEIGEFPLIIRPAFTLGGTGGGIAYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKE 301
           + + EIG FPL++RP++ LGG    I Y++++        ++ S  + VL+++ L    E
Sbjct: 702 AKSQEIG-FPLVVRPSYVLGGRAMEIVYDEDDLRRYMTEAVSVSNEAPVLLDRFLDDAIE 760

Query: 302 YELEVMRDLADNVVIICSIENVDPMGVHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREI 361
            +++ + D  +NV+I   +E+++  GVH+GDS    PA +L+ +    +R     +  E+
Sbjct: 761 VDVDAICD-GENVIIGGIMEHIEQAGVHSGDSACSLPAHSLSQEIQDVMRKQVRDMALEL 819

Query: 362 GVECGGSNVQFAVNPVDGEVMVIEMNPRVSRSSALASKATGFPIAKMAAKLSVGYSLDQI 421
           GV  G  N QFAV   DG+V +IE+NPR +R+    SKATG  +AK+AA+  VG SL+  
Sbjct: 820 GV-VGLMNTQFAVK--DGQVYLIEVNPRAARTVPFVSKATGVALAKVAARCMVGQSLES- 875

Query: 422 PNDITKKTPASFEPSIDYVVTKIPRFAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQ 481
              +TK+    +     Y V ++    F KF G +P+   +M+S GE M +G  F E+F 
Sbjct: 876 -QGVTKEVIPPY-----YSVKEVV-LPFAKFQGVDPMRGPEMRSTGEVMGVGENFAEAFA 928

Query: 482 KA 483
           KA
Sbjct: 929 KA 930


>gi|421555575|ref|ZP_16001502.1| carbamoyl-phosphate synthase large chain [Neisseria meningitidis
            98008]
 gi|402329035|gb|EJU64397.1| carbamoyl-phosphate synthase large chain [Neisseria meningitidis
            98008]
          Length = 1071

 Score = 1250 bits (3234), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 621/1070 (58%), Positives = 796/1070 (74%), Gaps = 22/1070 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTDL+ ILI+GAGPIVIGQACEFDYSG QACKAL+EEGY+VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDLKSILIIGAGPIVIGQACEFDYSGAQACKALREEGYKVILVNSNPATIMTDPEMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  + VE+++ KERPDA+LPTMGGQTALN A+ LA +G L KY VELIGA  DA
Sbjct: 63   VTYIEPIMWQTVEKIIAKERPDAILPTMGGQTALNCALDLARNGVLAKYNVELIGATEDA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  FK+AM+ IG+  P S + +T++E ++   ++G FP +IRP+FT+GG+GGGI
Sbjct: 123  IDKAEDRGRFKEAMEKIGLSCPKSFVCHTMNEALAAQEQVG-FPTLIRPSFTMGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYNK+EF AIC+ G  AS T ++L+E+S+LGWKEYE+EV+RD  DN +IICSIEN DPMG
Sbjct: 182  AYNKDEFLAICERGFDASPTHELLIEQSVLGWKEYEMEVVRDKNDNCIIICSIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGV+ GGSNVQFAVNP +GE++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQIMRNASLAVLREIGVDTGGSNVQFAVNPENGEMIVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITK-KTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VG++LD++ NDIT  +TPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGFTLDELRNDITSGRTPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            FAFEKFP ++  LTTQMKSVGE MA+GRT QESFQKALR LE G  G+   +      D 
Sbjct: 362  FAFEKFPAADDRLTTQMKSVGEVMAMGRTIQESFQKALRGLETGLCGFNPRS-----SDK 416

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
             +++  L  P P+RM  +  A + G  ++EIHE+  ID WFL Q ++L+  E+ +    +
Sbjct: 417  AEIRRELANPGPERMLFVADAFRAGFTLEEIHEICAIDPWFLAQIEDLMKEEKTVSDGIL 476

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
            S++       +KR+GFSDK++A     +EKEVRE R +L + P YKRVDTCAAEF   T 
Sbjct: 477  SDLDFAALRRLKRKGFSDKRLAQLLNVSEKEVREHRYALNLHPVYKRVDTCAAEFATETA 536

Query: 627  YMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSN 686
            Y+YS+Y+ ECE+ P+ +KKV+ILGGGPNRIGQGIEFDYCC H + +L+ +G+ETIM+N N
Sbjct: 537  YLYSTYEEECEARPSDRKKVMILGGGPNRIGQGIEFDYCCVHAALALRESGFETIMVNCN 596

Query: 687  PETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHR 746
            PETVSTD+DTSDRLYFEPLT+EDVL ++  E P G+IV +GGQTPLKL+           
Sbjct: 597  PETVSTDFDTSDRLYFEPLTLEDVLEIVRTENPWGVIVHYGGQTPLKLA----------- 645

Query: 747  LPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEIG 806
              +A  +  V I GTS DSIDAAEDRERF  ++ +L + QP   IA +E +AL  A+EIG
Sbjct: 646  --NALVENGVNIIGTSADSIDAAEDRERFQKVLNDLGLRQPPNRIAHNEEEALVKAEEIG 703

Query: 807  YPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALAD 866
            YP+VVRPSYVLGGRAM+IV++ E L  Y+  AV+V  + PVL+D +L++AIE+DVD ++D
Sbjct: 704  YPLVVRPSYVLGGRAMQIVHSAEALQKYMREAVQVSEDSPVLLDFFLNNAIEVDVDCVSD 763

Query: 867  SCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNC 926
               +VVIGGIM+H+EQAG+HSGDS C +P  ++S    D I   T  +A  L V GLMN 
Sbjct: 764  G-KDVVIGGIMQHVEQAGIHSGDSGCSLPPYSLSEEIQDEIRRQTKAMAYALGVVGLMNV 822

Query: 927  QYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPKH 986
            Q+A+   G V++LE NPRASRTVPFVSKA G PLAK  A  M+G SL + G  KE++P  
Sbjct: 823  QFAV-QDGVVFVLEVNPRASRTVPFVSKATGVPLAKVGARCMAGISLKEQGVEKEIVPDF 881

Query: 987  VSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVFL 1046
             +VKEAV PF KF G D +LGPEMRSTGEVMG+  SF  A+ KAQ+ AG++L  +G +FL
Sbjct: 882  YAVKEAVFPFIKFPGVDTILGPEMRSTGEVMGVGASFGEAYYKAQLGAGERLNPTGKIFL 941

Query: 1047 SLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVAN 1106
            S+ +  K  + + AK F  +G+ I +T GTA +L  +G+ V+ + K+ EGRPH GD + N
Sbjct: 942  SVREEDKERVIKTAKNFQVLGYGICATRGTAQYLTEQGLIVQTINKVPEGRPHIGDALKN 1001

Query: 1107 GQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRS 1156
            G+I ++V T S D     D   +R+  L  +VP  TT +G  A +E  +S
Sbjct: 1002 GEIALVVNTVSSDPQSVSDSHIIRQSALQQRVPQYTTTAGGEAMSEGAKS 1051


>gi|254787220|ref|YP_003074649.1| carbamoyl phosphate synthase large subunit [Teredinibacter turnerae
            T7901]
 gi|237686984|gb|ACR14248.1| carbamoyl-phosphate synthase, large subunit [Teredinibacter turnerae
            T7901]
          Length = 1073

 Score = 1250 bits (3234), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 627/1084 (57%), Positives = 792/1084 (73%), Gaps = 20/1084 (1%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD+  ILI+GAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDINSILIIGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPAMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+T + V +++EKERPDA+LPTMGGQTALN A+ L  +G LEK+ VELIGA  DA
Sbjct: 63   ATYIEPITWQTVAKIIEKERPDAILPTMGGQTALNCALELHANGVLEKFNVELIGATQDA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDRD F +AMK IG++   + I +T++E   +  E G FP+IIRP+FT+GG+GGGI
Sbjct: 123  IDKAEDRDRFDKAMKNIGLECARAKIVHTMEEANEVPKEFG-FPVIIRPSFTMGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN EEFE IC  GL  S T+++L+++SLLGWKEYE+EV+RD  DN +IICSIEN DPMG
Sbjct: 182  AYNWEEFEEICLRGLDLSPTNELLIDESLLGWKEYEMEVVRDKNDNCIIICSIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGVE GGSNVQFAVNP +G ++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQLMRNASVAVLREIGVETGGSNVQFAVNPENGRLVVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITK-KTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ N+IT   TPASFEPSIDYVVTK+PR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGYTLDELQNEITGGATPASFEPSIDYVVTKVPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            F FEKF  ++  LTTQMKSVGE MA+GR+FQES QKALR LE G +G+        D   
Sbjct: 362  FTFEKFGDADARLTTQMKSVGEVMAIGRSFQESLQKALRGLEVGSAGFEPRLDLTSDDAI 421

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
            +++++ L  P  +R+  I  A + GM VDE+++ S ID WFL Q K+LID E  L    +
Sbjct: 422  DRIRHDLATPGAERIWYIGDAFRAGMSVDEVYQKSKIDTWFLAQIKDLIDTEAALAETPL 481

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
            S++ ++  + +KR+GFSDK++A     +EK VR+ R  LGV P+YKRVDTCAAEF  +T 
Sbjct: 482  SDIDENIMFRLKRKGFSDKRLAELLAVSEKTVRDHRHRLGVHPAYKRVDTCAAEFSTSTA 541

Query: 627  YMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSN 686
            YMYS+Y+ ECES P+ ++K+++LGGGPNRIGQGIEFDYCC H + + +  GYETIM+N N
Sbjct: 542  YMYSTYEEECESDPSDREKIMVLGGGPNRIGQGIEFDYCCVHAALAAREDGYETIMVNCN 601

Query: 687  PETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHR 746
            PETVSTDYDTSDRLYFEP+T+EDVL ++  E+P+G+IVQFGGQTPLKL+  +        
Sbjct: 602  PETVSTDYDTSDRLYFEPVTLEDVLEIVHKEKPKGVIVQFGGQTPLKLANAL-------- 653

Query: 747  LPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEIG 806
              +A G   V I GTSP++ID AEDRERF  +I  L + QP   I +S  +AL++AKE+G
Sbjct: 654  --AAEG---VPIIGTSPEAIDRAEDRERFQQMIHRLGLLQPPNAIVRSTEEALSVAKEVG 708

Query: 807  YPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALAD 866
            YP+VVRPSYVLGGRAMEIVYT   L  Y+  AV+   + PVL+D +L++AIE+D+DA++D
Sbjct: 709  YPLVVRPSYVLGGRAMEIVYTKSELANYMREAVQASEDAPVLLDHFLNNAIEVDIDAVSD 768

Query: 867  SCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNC 926
               +VVIG IM+HIEQ GVHSGDSAC +P  ++     + +     K+A  L V GLMN 
Sbjct: 769  G-KDVVIGAIMQHIEQCGVHSGDSACSLPPYSLPEDVQNEMREQVRKMAVELGVIGLMNV 827

Query: 927  QYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPKH 986
            Q A    G +Y++E NPR SRTVPFVSK IG  LAK AA   +G SL + GFT+E+IP +
Sbjct: 828  QLAY-QDGKIYVIEVNPRGSRTVPFVSKCIGVSLAKVAARCQAGMSLEEQGFTQEIIPDY 886

Query: 987  VSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVFL 1046
             SVKEAV PF KF   D +LGPEM+STGEVMG+  +F  AF KAQ+ +G  LP SG  F+
Sbjct: 887  FSVKEAVFPFNKFPAVDPILGPEMKSTGEVMGVGETFAEAFFKAQLGSGSALPTSGKAFI 946

Query: 1047 SLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVAN 1106
            S+ D  KP    +AK   D+GF +V+T GTA   E  G+ VERV K+ EGRPH  DM+ N
Sbjct: 947  SVRDFDKPGSVVVAKELADMGFHLVATHGTAQVFEEAGLTVERVNKVGEGRPHIVDMIKN 1006

Query: 1107 GQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTVTMTA 1166
             +I +++ T+ G    + D   +RR      V   TT++ A A   AIR  K   V    
Sbjct: 1007 REIHLVINTTEGKKAIK-DSASIRRSAEMNHVYYTTTLTAADALCVAIRFGKEQEVRR-- 1063

Query: 1167 LQDF 1170
            LQD 
Sbjct: 1064 LQDL 1067


>gi|319763188|ref|YP_004127125.1| carbamoyl-phosphate synthase large subunit [Alicycliphilus
            denitrificans BC]
 gi|330825251|ref|YP_004388554.1| carbamoyl-phosphate synthase large subunit [Alicycliphilus
            denitrificans K601]
 gi|317117749|gb|ADV00238.1| carbamoyl-phosphate synthase, large subunit [Alicycliphilus
            denitrificans BC]
 gi|329310623|gb|AEB85038.1| carbamoyl-phosphate synthase, large subunit [Alicycliphilus
            denitrificans K601]
          Length = 1083

 Score = 1250 bits (3234), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 645/1101 (58%), Positives = 814/1101 (73%), Gaps = 32/1101 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILI+GAGPI+IGQACEFDYSG QACKAL+EEGY VILINSNPATIMTDP  AD
Sbjct: 3    KRTDIQSILIIGAGPIIIGQACEFDYSGVQACKALREEGYRVILINSNPATIMTDPATAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+T + VE+++ KERPDA+LPTMGGQTALN A+ L  +G L KY VELIGAK +A
Sbjct: 63   VTYIEPITWQTVEKIIAKERPDAILPTMGGQTALNCALDLWRNGVLNKYRVELIGAKPEA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  FK AM  IG+++  SGI +++DE  ++   +G FP +IRP+FTLGGTGGGI
Sbjct: 123  IDKAEDRLKFKDAMTRIGLESARSGIAHSMDEAWAVQKHVG-FPTVIRPSFTLGGTGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN EEFE ICK GL AS T+++L+E+SLLGWKEYE+EV+RD ADN +I+CSIEN+DPMG
Sbjct: 182  AYNPEEFETICKRGLEASPTNELLIEESLLGWKEYEMEVVRDKADNCIIVCSIENLDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTD+EYQ LRD SIA++REIGV+ GGSNVQF+VNP DG ++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDREYQILRDASIAVLREIGVDTGGSNVQFSVNPKDGRMIVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT   TPASFEP+IDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGYTLDELRNDITGGATPASFEPTIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            FAFEKFP ++  LTTQMKSVGE MA+GRTFQESFQKALR LE G  G     + E   D 
Sbjct: 362  FAFEKFPTADSRLTTQMKSVGEVMAMGRTFQESFQKALRGLEVGVDG-----MNEKTQDR 416

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLT--- 563
            E L+  L  P P+R+  +  A  +GM VDE+ EL+ ID+WFL Q ++++ +E  L     
Sbjct: 417  ELLEKELGEPGPERIWYVGDAFAQGMSVDEVFELTKIDRWFLVQIEQIVKIELDLDKLYA 476

Query: 564  ----QSVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAA 619
                 +++ +       +K++GFSD+++A    ++EK VR+ R +L V P YKRVDTCAA
Sbjct: 477  DKGDAALAALDAATLRALKQKGFSDRRLAKLLHTSEKAVRDARRALNVRPVYKRVDTCAA 536

Query: 620  EFEANTPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYE 679
            EF  NT YMYS+YD ECE+APT KKK+++LGGGPNRIGQGIEFDYCC H + +++  GYE
Sbjct: 537  EFPTNTAYMYSTYDEECEAAPTDKKKIMVLGGGPNRIGQGIEFDYCCVHAALAMREDGYE 596

Query: 680  TIMMNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIH 739
            TIM+N NPETVSTDYDTSDRLYFEPLT+EDVL ++D E+PEG+IVQ+GGQTPLKL+L + 
Sbjct: 597  TIMVNCNPETVSTDYDTSDRLYFEPLTLEDVLEIVDKEKPEGVIVQYGGQTPLKLALGLE 656

Query: 740  QYLDEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADAL 799
            +            +G V I GT+PD IDAAEDRERF  ++ +L + QP    A++EA+A+
Sbjct: 657  R------------EG-VPIIGTTPDMIDAAEDRERFQKLLGDLGLRQPPNATARTEAEAM 703

Query: 800  AIAKEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEI 859
              A  +GYP+VVRPSYVLGGRAMEIV+    L  Y+  AV+V  E PVL+D++LS+AIE 
Sbjct: 704  EKASALGYPLVVRPSYVLGGRAMEIVHEQRDLERYMREAVKVSNESPVLLDRFLSNAIEC 763

Query: 860  DVDALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLN 919
            DVD + D+ G V IGG+MEHIEQAGVHSGDSAC +P   + +  +  I   T  +A  LN
Sbjct: 764  DVDCVRDATGAVFIGGVMEHIEQAGVHSGDSACSLPPYYLKAETVAEIKRQTTAMAHGLN 823

Query: 920  VCGLMNCQYAI--TTSGDV-YLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDL 976
            V GLMN Q+AI  T +GDV Y+LE NPRASRTVPFVSKA G  LAK AA  M+G+SL   
Sbjct: 824  VVGLMNVQFAIQETDAGDVIYVLEVNPRASRTVPFVSKATGIQLAKVAARCMAGQSLVSQ 883

Query: 977  GFTKEVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQ 1036
            G T+EV P + SVKEAV PF KF G D +LGPEM+STGEVMG+  +F  AF K+Q+ AG 
Sbjct: 884  GVTREVTPPYFSVKEAVFPFVKFPGVDTILGPEMKSTGEVMGVGTTFGEAFVKSQLGAGT 943

Query: 1037 KLPLSGTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEG 1096
            +LP SG VFL++ +  KP    IA+    +GF++++T GTA  +   G++V+ V K+ EG
Sbjct: 944  RLPRSGKVFLTVKNADKPRAVSIARDLAAMGFELLATKGTAAAIAEAGVSVQVVNKVTEG 1003

Query: 1097 RPHAGDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRS 1156
            RPH  DM+ N +I M++ T         D   +R   LA +V   TT+ GA A  E ++ 
Sbjct: 1004 RPHIVDMIKNDEIAMVINTVEERRNAIADSRAIRTSSLAARVTTFTTIFGAEAAVEGMKH 1063

Query: 1157 LKSNTVTMTALQDFFDVETAS 1177
            L  +T+ + ++Q+     TA+
Sbjct: 1064 L--DTLDVYSVQELHARLTAA 1082


>gi|59800515|ref|YP_207227.1| carbamoyl phosphate synthase large subunit [Neisseria gonorrhoeae FA
            1090]
 gi|293397753|ref|ZP_06641959.1| carbamoyl-phosphate synthase, large subunit [Neisseria gonorrhoeae
            F62]
 gi|59717410|gb|AAW88815.1| carbamoyl phosphate synthase large subunit [Neisseria gonorrhoeae FA
            1090]
 gi|291611699|gb|EFF40768.1| carbamoyl-phosphate synthase, large subunit [Neisseria gonorrhoeae
            F62]
          Length = 1071

 Score = 1250 bits (3234), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 622/1070 (58%), Positives = 794/1070 (74%), Gaps = 22/1070 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTDL+ ILI+GAGPIVIGQACEFDYSG QACKAL+EEGY+VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDLKSILIIGAGPIVIGQACEFDYSGAQACKALREEGYKVILVNSNPATIMTDPEMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  + VE+++ KERPDA+LPTMGGQTALN A+ LA +G L KY VELIGA  DA
Sbjct: 63   VTYIEPIMWQTVEKIIAKERPDAILPTMGGQTALNCALDLARNGVLAKYNVELIGATEDA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  FK+AM+ IG+  P S + +T++E ++   ++G FP +IRP+FT+GG+GGGI
Sbjct: 123  IDKAEDRGRFKEAMEKIGLSCPKSFVCHTMNEALAAQEQVG-FPTLIRPSFTMGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYNK+EF AIC+ G  AS T ++L+E+S+LGWKEYE+EV+RD ADN +IICSIEN DPMG
Sbjct: 182  AYNKDEFLAICERGFDASPTHELLIEQSVLGWKEYEMEVVRDKADNCIIICSIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGV+ GGSNVQFAVNP +GE++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQIMRNASLAVLREIGVDTGGSNVQFAVNPENGEMIVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VG++LD++ NDIT  +TPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGFTLDELRNDITGGRTPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            FAFEKFP ++  LTTQMKSVGE MA+GRT QESFQKALR LE G  G+   +      D 
Sbjct: 362  FAFEKFPAADDRLTTQMKSVGEVMAMGRTIQESFQKALRGLETGLCGFNPRS-----EDK 416

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
             +++  L  P P+RM  +  A + G   +EIHE+  ID WFL Q ++L+  E+ +    +
Sbjct: 417  AEIRRELANPGPERMLFVADAFRAGFTPEEIHEICAIDPWFLAQIEDLMKEEKSVSDGQL 476

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
             ++       +KR+GFSDK++A     +EKEVRE R +L + P YKRVDTCAAEF   T 
Sbjct: 477  QDLDYAALRRLKRKGFSDKRLAQLLNVSEKEVREHRYALKLHPVYKRVDTCAAEFATETA 536

Query: 627  YMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSN 686
            Y+YS+Y+ ECES P+ +KKV+ILGGGPNRIGQGIEFDYCC H + +L+ +G+ETIM+N N
Sbjct: 537  YLYSTYEEECESRPSDRKKVMILGGGPNRIGQGIEFDYCCVHAALALRESGFETIMVNCN 596

Query: 687  PETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHR 746
            PETVSTD+DTSDRLYFEPLT+EDVL ++  E P G+IV +GGQTPLKL+           
Sbjct: 597  PETVSTDFDTSDRLYFEPLTLEDVLEIVRTENPWGVIVHYGGQTPLKLA----------- 645

Query: 747  LPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEIG 806
              +A  +  V I GTS DSIDAAEDRERF  ++ +L + QP   IA +E +AL  A+EIG
Sbjct: 646  --NALVENGVNIIGTSADSIDAAEDRERFQKVLNDLGLRQPPNRIAHNEEEALVKAEEIG 703

Query: 807  YPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALAD 866
            YP+VVRPSYVLGGRAM+I+++ E L  Y+  AV+V  + PVL+D +L++AIE+DVD ++D
Sbjct: 704  YPLVVRPSYVLGGRAMQIIHSAEQLQKYMREAVQVSEDSPVLLDFFLNNAIEVDVDCVSD 763

Query: 867  SCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNC 926
               +VVIGGIM+H+EQAG+HSGDS C +P  ++S    D I   T  +A  L V GLMN 
Sbjct: 764  G-KDVVIGGIMQHVEQAGIHSGDSGCSLPPYSLSEEIQDEIRRQTKAMAYALGVVGLMNV 822

Query: 927  QYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPKH 986
            Q+A+   G V++LE NPRASRTVPFVSKA G PLAK  A  M+G SL + G  KEV+P  
Sbjct: 823  QFAV-QDGVVFVLEVNPRASRTVPFVSKATGVPLAKVGARCMAGISLKEQGVEKEVVPDF 881

Query: 987  VSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVFL 1046
             +VKEAV PF KF G D +LGPEMRSTGEVMG+  SF  A+ KAQ+ AG++L  +G +FL
Sbjct: 882  YAVKEAVFPFIKFPGVDTILGPEMRSTGEVMGVGASFGEAYYKAQLGAGERLNPTGKIFL 941

Query: 1047 SLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVAN 1106
            S+ +  K  + + AK F  +G+ I +T GTA +L   G+ V+ + K+ EGRPH GD + N
Sbjct: 942  SVREEDKERVIKTAKNFQALGYGICATRGTAQYLTEHGLIVQAINKVPEGRPHIGDALKN 1001

Query: 1107 GQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRS 1156
            G+I ++V T S D     D   +R+  L  +VP  TT +G  A +E  +S
Sbjct: 1002 GEIALVVNTVSSDPQSVSDSHIIRQSALQQRVPQYTTTAGGEAMSEGAKS 1051


>gi|418288993|ref|ZP_12901395.1| carbamoyl-phosphate synthase, large subunit [Neisseria meningitidis
            NM233]
 gi|418291250|ref|ZP_12903283.1| carbamoyl-phosphate synthase, large subunit [Neisseria meningitidis
            NM220]
 gi|421559835|ref|ZP_16005702.1| carbamoyl-phosphate synthase large chain [Neisseria meningitidis
            92045]
 gi|372200182|gb|EHP14301.1| carbamoyl-phosphate synthase, large subunit [Neisseria meningitidis
            NM220]
 gi|372200579|gb|EHP14635.1| carbamoyl-phosphate synthase, large subunit [Neisseria meningitidis
            NM233]
 gi|389606553|emb|CCA45466.1| carbamoyl phosphate synthase large subunit [Neisseria meningitidis
            alpha522]
 gi|402334401|gb|EJU69689.1| carbamoyl-phosphate synthase large chain [Neisseria meningitidis
            92045]
          Length = 1071

 Score = 1250 bits (3234), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 622/1070 (58%), Positives = 795/1070 (74%), Gaps = 22/1070 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTDL+ ILI+GAGPIVIGQACEFDYSG QACKAL+EEGY+VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDLKSILIIGAGPIVIGQACEFDYSGAQACKALREEGYKVILVNSNPATIMTDPEMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  + VE+++ KERPDA+LPTMGGQTALN A+ LA +G L KY VELIGA  DA
Sbjct: 63   VTYIEPIMWQTVEKIIAKERPDAILPTMGGQTALNCALDLARNGVLAKYNVELIGATEDA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  FK+AM+ IG+  P S + +T++E ++   ++G FP +IRP+FT+GG+GGGI
Sbjct: 123  IDKAEDRGRFKEAMEKIGLSCPKSFVCHTMNEALAAQEQVG-FPTLIRPSFTMGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYNK+EF AIC+ G  AS T ++L+E+S+LGWKEYE+EV+RD  DN +IICSIEN DPMG
Sbjct: 182  AYNKDEFLAICERGFDASPTHELLIEQSVLGWKEYEMEVVRDKNDNCIIICSIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGV+ GGSNVQFA+NP +GE++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQIMRNASLAVLREIGVDTGGSNVQFAMNPENGEMIVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VG++LD++ NDIT  KTPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGFTLDELRNDITGGKTPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            FAFEKFP ++  LTTQMKSVGE MA+GRT QESFQKALR LE G  G+   +      D 
Sbjct: 362  FAFEKFPAADDRLTTQMKSVGEVMAMGRTIQESFQKALRGLETGLCGFNPRS-----SDK 416

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
             +++  L  P P+RM  +  A + G  ++EIHE+  ID WFL Q ++L+  E+ +    +
Sbjct: 417  AEIRRELANPGPERMLFVADAFRAGFTLEEIHEICAIDPWFLAQIEDLMKEEKAVSDGIL 476

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
            S++       +KR+GFSDK++A     +EKEVRE R +L + P YKRVDTCAAEF   T 
Sbjct: 477  SDLDFAALRRLKRKGFSDKRLAQLLNVSEKEVREHRYALKLHPVYKRVDTCAAEFATETA 536

Query: 627  YMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSN 686
            Y+YS+Y+ ECE+ P+ +KKV+ILGGGPNRIGQGIEFDYCC H + +L+ +G+ETIM+N N
Sbjct: 537  YLYSTYEEECEARPSDRKKVMILGGGPNRIGQGIEFDYCCVHAALALRESGFETIMVNCN 596

Query: 687  PETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHR 746
            PETVSTD+DTSDRLYFEPLT+EDVL ++  E P G+IV +GGQTPLKL+           
Sbjct: 597  PETVSTDFDTSDRLYFEPLTLEDVLEIVRTENPWGVIVHYGGQTPLKLA----------- 645

Query: 747  LPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEIG 806
              +A  +  V I GTS DSIDAAEDRERF  ++ +L + QP   IA +E +AL  A+EIG
Sbjct: 646  --NALVENGVNIIGTSADSIDAAEDRERFQKVLNDLGLRQPPNRIAHNEEEALVKAEEIG 703

Query: 807  YPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALAD 866
            YP+VVRPSYVLGGRAM+IV++ E L  Y+  AV+V  + PVL+D +L++AIE+DVD ++D
Sbjct: 704  YPLVVRPSYVLGGRAMQIVHSAEQLQKYMREAVQVSEDSPVLLDFFLNNAIEVDVDCVSD 763

Query: 867  SCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNC 926
               +VVIGGIM+H+EQAG+HSGDS C +P  ++S    D I   T  +A  L V GLMN 
Sbjct: 764  G-KDVVIGGIMQHVEQAGIHSGDSGCSLPPYSLSEEIQDEIRRQTKAMAYALGVVGLMNV 822

Query: 927  QYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPKH 986
            Q+A+   G V++LE NPRASRTVPFVSKA G PLAK  A  M+G SL + G  KEV+P  
Sbjct: 823  QFAV-QDGVVFVLEVNPRASRTVPFVSKATGVPLAKVGARCMAGISLKEQGVEKEVVPDF 881

Query: 987  VSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVFL 1046
             +VKEAV PF KF G D +LGPEMRSTGEVMG+  SF  A+ KAQ+ AG++L  +G +FL
Sbjct: 882  YAVKEAVFPFIKFPGVDTILGPEMRSTGEVMGVGASFGEAYYKAQLGAGERLNPTGKIFL 941

Query: 1047 SLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVAN 1106
            S+ +  K  + + AK F  +G+ I +T GTA +L   G+ V+ + K+ EGRPH GD + N
Sbjct: 942  SVREEDKERVIKTAKNFQALGYGICATRGTAQYLTEHGLIVQTINKVPEGRPHIGDALKN 1001

Query: 1107 GQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRS 1156
            G+I ++V T S D     D   +R+  L  +VP  TT +G  A +E  +S
Sbjct: 1002 GEIALVVNTVSSDPQSVSDSHIIRQSALQQRVPQYTTTAGGEAMSEGAKS 1051


>gi|398992990|ref|ZP_10695949.1| carbamoyl-phosphate synthase, large subunit [Pseudomonas sp. GM21]
 gi|398136067|gb|EJM25168.1| carbamoyl-phosphate synthase, large subunit [Pseudomonas sp. GM21]
          Length = 1073

 Score = 1250 bits (3234), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 622/1088 (57%), Positives = 803/1088 (73%), Gaps = 28/1088 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILILGAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPDMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  + V +++EKERPDALLPTMGGQTALN A+ L   G LEK+GVE+IGA  D 
Sbjct: 63   ATYIEPIKWQTVAKIIEKERPDALLPTMGGQTALNCALDLEREGVLEKFGVEMIGANADT 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  F +AMK+IG+  P SGI ++++E  ++   +G FP IIRP+FT+GGTGGGI
Sbjct: 123  IDKAEDRSRFDKAMKSIGLDCPRSGIAHSMEEANAVLERLG-FPCIIRPSFTMGGTGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEFE IC  GL  S T ++L+++SL+GWKEYE+EV+RD  DN +I+CSIEN DPMG
Sbjct: 182  AYNREEFEEICARGLDLSPTKELLIDESLIGWKEYEMEVVRDKKDNCIIVCSIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGVE GGSNVQF + P  G ++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQIMRNASLAVLREIGVETGGSNVQFGICPDTGRMVVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIA++AAKL++GY+LD++ N+IT   TPASFEPSIDYVVTK+PR
Sbjct: 302  PRVSRSSALASKATGFPIARIAAKLAIGYTLDELQNEITGGATPASFEPSIDYVVTKLPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            FAFEKFP ++  LTTQMKSVGE MA+GRTFQES QKALR LE G  G      ++LD   
Sbjct: 362  FAFEKFPKADARLTTQMKSVGEVMAIGRTFQESLQKALRGLEVGVCGLD----EKLDLSN 417

Query: 507  EQ----LKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLL 562
             +    LK  L VP  +R+  +  A + G+ V++I  ++ ID WFL Q ++LI  E+ + 
Sbjct: 418  PESMSVLKRELTVPGAERIWYVADAFRAGLSVEDIFGMNMIDPWFLVQIEDLIKEEEKVK 477

Query: 563  TQSVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFE 622
            T  ++++ +D  + +KR+GFSD ++A     TEK +R  R  L + P YKRVDTCAAEF 
Sbjct: 478  TLGLASIDRDLMFRLKRKGFSDMRLAKLLGVTEKALRRHRHKLEIFPVYKRVDTCAAEFA 537

Query: 623  ANTPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIM 682
             +T Y+YS+Y+ ECE+AP+ + K++ILGGGPNRIGQGIEFDYCC H + +L+  GYETIM
Sbjct: 538  TDTAYLYSTYEEECEAAPSGRDKIMILGGGPNRIGQGIEFDYCCVHAALALREDGYETIM 597

Query: 683  MNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYL 742
            +N NPETVSTDYDTSDRLYFEP+T+EDVL ++ +E+P+G+IVQ+GGQTPLKL+    + L
Sbjct: 598  VNCNPETVSTDYDTSDRLYFEPVTLEDVLEIVRVEKPKGVIVQYGGQTPLKLA----RAL 653

Query: 743  DEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIA 802
            +E  +P         I GTSPD+ID AEDRERF  +++ L++ QP     +SE +A+  A
Sbjct: 654  EEAGVP---------IIGTSPDAIDRAEDRERFQQMVERLNLRQPPNATVRSEDEAIRAA 704

Query: 803  KEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVD 862
             +IGYP+VVRPSYVLGGRAMEIVY +E L  YL +AV+V  + PVL+D +L+ AIE+DVD
Sbjct: 705  AKIGYPLVVRPSYVLGGRAMEIVYEEEELKRYLRDAVKVSNDSPVLLDHFLNCAIEMDVD 764

Query: 863  ALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCG 922
            A+ D   +VVIG IM+HIEQAGVHSGDSAC +P  ++     D +     K+A  L V G
Sbjct: 765  AVCDGT-DVVIGAIMQHIEQAGVHSGDSACSLPPYSLPVHIQDEMREQVKKMALELGVVG 823

Query: 923  LMNCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEV 982
            LMN Q A+    D+Y++E NPRASRTVPFVSK IG  LA  AA VM+GK+L ++GFTKE+
Sbjct: 824  LMNVQLALQGE-DIYVIEVNPRASRTVPFVSKCIGVSLAMIAARVMAGKTLKEIGFTKEI 882

Query: 983  IPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSG 1042
            IP   SVKEAV PF KF G D +LGPEM+STGEVMG+  +F  AFAKAQ+ A + LP  G
Sbjct: 883  IPNFYSVKEAVFPFAKFPGVDPILGPEMKSTGEVMGVGDTFGEAFAKAQMGASEVLPTGG 942

Query: 1043 TVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGD 1102
            T F+S+ D  KP +  +A+  +++GF++V+T+GTA  +E  G+ V RV K+ EGRPH  D
Sbjct: 943  TAFISVRDDDKPLVAGVARDLINLGFEVVATAGTAKLIEAAGLKVRRVNKVTEGRPHVVD 1002

Query: 1103 MVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTV 1162
            M+ N ++ +++ T+ G      D   +RR  L +K+   TT++   A  EA++     TV
Sbjct: 1003 MIKNDEVTLIINTTEGRQ-SIADSYSIRRNALQHKIYCTTTIAAGEAICEALKFGPEKTV 1061

Query: 1163 TMTALQDF 1170
                LQD 
Sbjct: 1062 RR--LQDL 1067


>gi|313669076|ref|YP_004049360.1| carbamoyl phosphate synthase large subunit [Neisseria lactamica
            020-06]
 gi|313006538|emb|CBN88002.1| carbamoyl phosphate synthase large subunit [Neisseria lactamica
            020-06]
          Length = 1071

 Score = 1249 bits (3233), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 625/1070 (58%), Positives = 795/1070 (74%), Gaps = 22/1070 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTDL+ ILI+GAGPIVIGQACEFDYSG QACKAL+EEGY+VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDLKSILIIGAGPIVIGQACEFDYSGAQACKALREEGYKVILVNSNPATIMTDPEMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  + VE+++ KERPDA+LPTMGGQTALN A+ LA +G L KY VELIGA  DA
Sbjct: 63   VTYIEPIMWQTVEKIIAKERPDAILPTMGGQTALNCALDLARNGVLAKYNVELIGATEDA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  FK+AM+ IG+  P S + +T++E ++   ++G FP +IRP+FT+GG+GGGI
Sbjct: 123  IDKAEDRGRFKEAMEKIGLSCPKSFVCHTMNEALAAQEQVG-FPTLIRPSFTMGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYNK+EF AIC+ G  AS T ++L+E+S+LGWKEYE+EV+RD  DN +IICSIEN DPMG
Sbjct: 182  AYNKDEFLAICERGFDASPTHELLIEQSVLGWKEYEMEVVRDKNDNCIIICSIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGV+ GGSNVQFAVNP +GE++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQIMRNASLAVLREIGVDTGGSNVQFAVNPENGEMIVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VG++LD++ NDIT  KTPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGFTLDELRNDITGGKTPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            FAFEKFP ++  LTTQMKSVGE MA+GRT QESFQKALR LE G  G+   +      D 
Sbjct: 362  FAFEKFPAADDRLTTQMKSVGEVMAMGRTIQESFQKALRGLETGLCGFNPRS-----SDK 416

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
             +++  L  P P+RM  +  A + G  ++EIHE+  ID WFL Q ++L+  E+ +    +
Sbjct: 417  AEIRRELANPGPERMLFVADAFRAGFTLEEIHEICAIDPWFLAQIEDLVKEEKAVSDGIL 476

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
            S++       +KR+GFSDK+IA      EKEVRE R +L + P YKRVDTCAAEF   T 
Sbjct: 477  SDLDFAALRRLKRKGFSDKRIAQLLGVKEKEVREHRYALKLHPVYKRVDTCAAEFATETA 536

Query: 627  YMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSN 686
            Y+YS+Y+ ECE+ P+ +KKV+ILGGGPNRIGQGIEFDYCC H + +L+ +G+ETIM+N N
Sbjct: 537  YLYSTYEEECEARPSDRKKVMILGGGPNRIGQGIEFDYCCVHAALALRESGFETIMVNCN 596

Query: 687  PETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHR 746
            PETVSTD+DTSDRLYFEPLT+EDVL ++  E P G+IV +GGQTPLKL+  +        
Sbjct: 597  PETVSTDFDTSDRLYFEPLTLEDVLEIVRTENPWGVIVHYGGQTPLKLANAL-------- 648

Query: 747  LPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEIG 806
               A+G   V I GTS DSIDAAEDRERF  ++ +L + QP   IA +E +AL  A+EIG
Sbjct: 649  --VANG---VNIIGTSADSIDAAEDRERFQKVLNDLGLRQPPNRIAHNEEEALVKAEEIG 703

Query: 807  YPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALAD 866
            YP+VVRPSYVLGGRAM+IV++ E L  Y+  AV+V  + PVL+D +L++AIE+DVD ++D
Sbjct: 704  YPLVVRPSYVLGGRAMQIVHSAEALQKYMREAVQVSEDSPVLLDFFLNNAIEVDVDCVSD 763

Query: 867  SCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNC 926
               +VVIGGIM+H+EQAG+HSGDS C +P  ++S    D I   T  +A  L V GLMN 
Sbjct: 764  G-KDVVIGGIMQHVEQAGIHSGDSGCSLPPYSLSEEIQDEIRRQTKAMAYALGVIGLMNV 822

Query: 927  QYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPKH 986
            Q+A+   G V++LE NPRASRTVPFVSKA G PLAK  A  M+G SL + G  KEV+P  
Sbjct: 823  QFAV-QDGVVFVLEVNPRASRTVPFVSKATGVPLAKVGARCMAGISLKEQGVEKEVVPDF 881

Query: 987  VSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVFL 1046
             +VKEAV PF KF G D +LGPEMRSTGEVMG+  SF  A+ KAQ+ AG++L  +G +FL
Sbjct: 882  YAVKEAVFPFIKFPGVDTILGPEMRSTGEVMGVGASFGEAYYKAQLGAGERLNPTGKIFL 941

Query: 1047 SLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVAN 1106
            S+ +  K  + + AK F  +G+ I +T GTA +L   G+ V+ + K+ EGRPH GD + N
Sbjct: 942  SVREEDKERVIKTAKNFQALGYGICATRGTAQYLTEHGLIVQTINKVPEGRPHIGDALKN 1001

Query: 1107 GQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRS 1156
            G+I ++V T S D     D   +R+  L  +VP  TT +G  A +E  +S
Sbjct: 1002 GEIALVVNTVSSDPQSVSDSHIIRQSALQQRVPQYTTTAGGEAMSEGAKS 1051


>gi|431804521|ref|YP_007231424.1| carbamoyl phosphate synthase large subunit [Pseudomonas putida
            HB3267]
 gi|430795286|gb|AGA75481.1| carbamoyl phosphate synthase large subunit [Pseudomonas putida
            HB3267]
          Length = 1073

 Score = 1249 bits (3233), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 629/1089 (57%), Positives = 801/1089 (73%), Gaps = 30/1089 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILILGAGPIVIGQACEFDYSG QACKAL+EEG+ VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGFRVILVNSNPATIMTDPAMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  + V +++EKERPDALLPTMGGQTALN A+ L   G LEK+GVE+IGA  D 
Sbjct: 63   ATYIEPIKWQSVAKIIEKERPDALLPTMGGQTALNCALDLERHGVLEKFGVEMIGANADT 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  F +AMK IG++ P SGI ++++E  ++   +G FP IIRP+FT+GGTGGGI
Sbjct: 123  IDKAEDRSRFDKAMKDIGLECPRSGIAHSMEEANAVLERLG-FPCIIRPSFTMGGTGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEFE IC  GL  S T ++L+++SL+GWKEYE+EV+RD  DN +I+CSIEN DPMG
Sbjct: 182  AYNREEFEEICARGLDLSPTKELLIDESLIGWKEYEMEVVRDKKDNCIIVCSIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGVE GGSNVQF + P  G ++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQIMRNASLAVLREIGVETGGSNVQFGICPNTGRMVVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT  +TPASFEPSIDYVVTK+PR
Sbjct: 302  PRVSRSSALASKATGFPIAKIAAKLAVGYTLDELQNDITGGRTPASFEPSIDYVVTKLPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            FAFEKFP ++  LTTQMKSVGE MA+GRTFQES QKALR LE G     C    ++D   
Sbjct: 362  FAFEKFPKADARLTTQMKSVGEVMAIGRTFQESLQKALRGLEVG----ACGLDPKVDLAN 417

Query: 507  EQ----LKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLL 562
             +    LK  L VP  +R+  +  AM+ GM  ++I +L+ ID WFL Q ++LI  E+ + 
Sbjct: 418  PEASSILKRELTVPGAERIWYVADAMRAGMTCEQIFDLTGIDMWFLVQMEDLIKEEEKVK 477

Query: 563  TQSVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFE 622
            T ++S++ KD    +KR+GFSD+++A     T+K +R  R  L V P YKRVDTCAAEF 
Sbjct: 478  TLALSSIDKDYMLRLKRKGFSDQRLAKLLGITDKNLRRHRHKLEVFPVYKRVDTCAAEFA 537

Query: 623  ANTPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIM 682
             +T Y+YS+Y+ ECE+ P+ + K++ILGGGPNRIGQGIEFDYCC H + +L+  GYETIM
Sbjct: 538  TDTAYLYSTYEEECEANPSTRDKIMILGGGPNRIGQGIEFDYCCVHAALALREDGYETIM 597

Query: 683  MNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYL 742
            +N NPETVSTDYDTSDRLYFEPLT+EDVL V  +E+P+G+IV +GGQTPLKL+    + L
Sbjct: 598  VNCNPETVSTDYDTSDRLYFEPLTLEDVLEVCRVEKPKGVIVHYGGQTPLKLA----RAL 653

Query: 743  DEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIA 802
            +E  +P         I GTSPD+ID AEDRERF  +++ L++ QP     +SE +A++ A
Sbjct: 654  EEAGVP---------IIGTSPDAIDRAEDRERFQQMVQRLNLLQPPNATVRSEEEAISAA 704

Query: 803  KEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVD 862
              IGYP+VVRPSYVLGGRAMEIVY  + L  YL  AV+V  + PVL+D +L+ AIE+DVD
Sbjct: 705  GGIGYPLVVRPSYVLGGRAMEIVYELDELKRYLREAVQVSNDSPVLLDHFLNCAIEMDVD 764

Query: 863  ALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCG 922
            A+ D   +VVIG IM+HIEQAGVHSGDSAC +P  ++S    D +     K+A  L V G
Sbjct: 765  AVCDGT-DVVIGAIMQHIEQAGVHSGDSACSLPPYSLSKEVQDEVRVQVKKMALELGVVG 823

Query: 923  LMNCQYAITTSGD-VYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKE 981
            LMN Q A+   GD +Y++E NPRASRTVPFVSK IG  LA  AA VM+GK+L +LGFT+E
Sbjct: 824  LMNVQLAL--QGDKIYVIEVNPRASRTVPFVSKCIGTSLAMIAARVMAGKTLKELGFTQE 881

Query: 982  VIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLS 1041
            +IP   SVKEAV PF KF G D +LGPEM+STGEVMG+  SF  AFAKAQ+ A + LP  
Sbjct: 882  IIPNFYSVKEAVFPFAKFPGVDPILGPEMKSTGEVMGVGDSFGEAFAKAQMGASEVLPTG 941

Query: 1042 GTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAG 1101
            GT F+S+ D  KP +  +A+  + +GF++V+T+GTA  +E  G+ V RV K+ EGRPH  
Sbjct: 942  GTAFISVRDDDKPQVAGVARDLIALGFEVVATAGTAKVIEAAGLKVRRVNKVTEGRPHVV 1001

Query: 1102 DMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNT 1161
            DM+ N ++ +++ T+ G      D   +RR  L +K+   TT++   A  EA++     T
Sbjct: 1002 DMIKNDEVSLIINTTEGRQ-SIADSYSIRRNALQHKIYCTTTIAAGEAICEALKFGPEKT 1060

Query: 1162 VTMTALQDF 1170
            V    LQD 
Sbjct: 1061 VRR--LQDL 1067


>gi|386013926|ref|YP_005932203.1| CarB protein [Pseudomonas putida BIRD-1]
 gi|24986476|gb|AAN70295.1|AE016670_5 carbamoyl-phosphate synthase, large subunit [Pseudomonas putida
            KT2440]
 gi|313500632|gb|ADR61998.1| CarB [Pseudomonas putida BIRD-1]
          Length = 1076

 Score = 1249 bits (3233), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 629/1089 (57%), Positives = 799/1089 (73%), Gaps = 30/1089 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILILGAGPIVIGQACEFDYSG QACKAL+EEG+ VIL+NSNPATIMTDP +AD
Sbjct: 6    KRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGFRVILVNSNPATIMTDPAMAD 65

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  + V +++EKERPDA+LPTMGGQTALN A+ L   G LEK+GVE+IGA  D 
Sbjct: 66   ATYIEPIKWQSVAKIIEKERPDAVLPTMGGQTALNCALDLERHGVLEKFGVEMIGANADT 125

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  F +AMK IG++ P SGI ++++E  ++  ++G FP IIRP+FT+GGTGGGI
Sbjct: 126  IDKAEDRSRFDKAMKDIGLECPRSGIAHSMEEANAVLEKLG-FPCIIRPSFTMGGTGGGI 184

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEFE IC  GL  S T ++L+++SL+GWKEYE+EV+RD  DN +I+CSIEN DPMG
Sbjct: 185  AYNREEFEEICTRGLDLSPTKELLIDESLIGWKEYEMEVVRDKKDNCIIVCSIENFDPMG 244

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGVE GGSNVQF + P  G ++VIEMN
Sbjct: 245  VHTGDSITVAPAQTLTDKEYQIMRNASLAVLREIGVETGGSNVQFGICPNTGRMVVIEMN 304

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL++GY+LD++ NDIT  +TPASFEPSIDYVVTK+PR
Sbjct: 305  PRVSRSSALASKATGFPIAKIAAKLAIGYTLDELQNDITGGRTPASFEPSIDYVVTKLPR 364

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            FAFEKFP ++  LTTQMKSVGE MA+GRTFQES QKALR LE G     C    ++D   
Sbjct: 365  FAFEKFPKADARLTTQMKSVGEVMAIGRTFQESLQKALRGLEVG----ACGLDPKVDLAS 420

Query: 507  EQ----LKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLL 562
             +    LK  L VP  +R+  +  AM+ GM  +EI  L+ ID WFL Q ++LI  E+ + 
Sbjct: 421  PEAASILKRELTVPGAERIWYVADAMRSGMTCEEIFNLTGIDMWFLVQMEDLIKEEEKVK 480

Query: 563  TQSVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFE 622
            T ++S + KD    +KR+GFSD+++A     T+K +R  R  L V P YKRVDTCAAEF 
Sbjct: 481  TLALSAIDKDYMLRLKRKGFSDQRLAVLLGITDKNLRRHRHKLEVFPVYKRVDTCAAEFA 540

Query: 623  ANTPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIM 682
             +T Y+YS+Y+ ECE+ P+ + K++ILGGGPNRIGQGIEFDYCC H + +L+  GYETIM
Sbjct: 541  TDTAYLYSTYEEECEANPSTRDKIMILGGGPNRIGQGIEFDYCCVHAALALREDGYETIM 600

Query: 683  MNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYL 742
            +N NPETVSTDYDTSDRLYFEPLT+EDVL V  +E+P+G+IV +GGQTPLKL+    + L
Sbjct: 601  VNCNPETVSTDYDTSDRLYFEPLTLEDVLEVCRVEKPKGVIVHYGGQTPLKLA----RAL 656

Query: 743  DEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIA 802
            +E  +P         I GTSPD+ID AEDRERF  +++ LS+ QP     +SE +A+  A
Sbjct: 657  EEAGVP---------IIGTSPDAIDRAEDRERFQQMVQRLSLLQPPNATVRSEEEAIRAA 707

Query: 803  KEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVD 862
              IGYP+VVRPSYVLGGRAMEIVY  + L  YL  AV+V  + PVL+D +L+ AIE+DVD
Sbjct: 708  GSIGYPLVVRPSYVLGGRAMEIVYELDELKRYLREAVQVSNDSPVLLDHFLNCAIEMDVD 767

Query: 863  ALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCG 922
            A+ D   +VVIG IM+HIEQAGVHSGDSAC +P  ++S    D +     K+A  L V G
Sbjct: 768  AVCDGT-DVVIGAIMQHIEQAGVHSGDSACSLPPYSLSKEVQDEVRVQVKKMALELGVVG 826

Query: 923  LMNCQYAITTSGD-VYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKE 981
            LMN Q A+   GD +Y++E NPRASRTVPFVSK IG  LA  AA VM+GK+L +LGFT+E
Sbjct: 827  LMNVQLAL--QGDKIYVIEVNPRASRTVPFVSKCIGTSLAMIAARVMAGKTLKELGFTQE 884

Query: 982  VIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLS 1041
            +IP   SVKEAV PF KF G D +LGPEM+STGEVMG+  SF  AFAKAQ+ A + LP  
Sbjct: 885  IIPNFYSVKEAVFPFAKFPGVDPILGPEMKSTGEVMGVGDSFGEAFAKAQMGASEVLPTG 944

Query: 1042 GTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAG 1101
            GT F+S+ D  KP +  +A+  + +GF++V+T+GTA  +E  G+ V RV K+ EGRPH  
Sbjct: 945  GTAFISVRDDDKPQVAGVARDLIALGFEVVATAGTAKVIEAAGLKVRRVNKVTEGRPHVV 1004

Query: 1102 DMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNT 1161
            DM+ N ++ +++ T+ G      D   +RR  L +K+   TT++   A  EA++     T
Sbjct: 1005 DMIKNDEVSLIINTTEGRQ-SIADSYSIRRNALQHKIYCTTTIAAGEAICEALKFGPEKT 1063

Query: 1162 VTMTALQDF 1170
            V    LQD 
Sbjct: 1064 VRR--LQDL 1070


>gi|433469983|ref|ZP_20427390.1| carbamoyl-phosphate synthase, large subunit [Neisseria meningitidis
            98080]
 gi|432201213|gb|ELK57296.1| carbamoyl-phosphate synthase, large subunit [Neisseria meningitidis
            98080]
          Length = 1071

 Score = 1249 bits (3233), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 623/1070 (58%), Positives = 793/1070 (74%), Gaps = 22/1070 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTDL+ ILI+GAGPIVIGQACEFDYSG QACKAL+EEGY+VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDLKSILIIGAGPIVIGQACEFDYSGAQACKALREEGYKVILVNSNPATIMTDPEMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  + VE+++ KERPDA+LPTMGGQTALN A+ LA +G L KY VELIGA  DA
Sbjct: 63   VTYIEPIMWQTVEKIIAKERPDAILPTMGGQTALNCALDLARNGVLAKYNVELIGATEDA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  FK+AM+ IG+  P S + +T++E ++   ++G FP +IRP+FT+GG+GGGI
Sbjct: 123  IDKAEDRGRFKEAMEKIGLSCPKSFVCHTMNEALAAQEQVG-FPTLIRPSFTMGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYNK+EF AIC+ G  AS T ++L+E+S+LGWKEYE+EV+RD  DN +IICSIEN DPMG
Sbjct: 182  AYNKDEFLAICERGFDASPTHELLIEQSVLGWKEYEMEVVRDKNDNCIIICSIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGV+ GGSNVQFAVNP +GE++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQIMRNASLAVLREIGVDTGGSNVQFAVNPENGEMIVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VG++LD++ NDIT  +TPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGFTLDELRNDITGGRTPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            FAFEKFP ++  LTTQMKSVGE MA+GRT QESFQKALR LE G  G+   +      D 
Sbjct: 362  FAFEKFPAADDRLTTQMKSVGEVMAMGRTIQESFQKALRGLETGLCGFNPRS-----SDK 416

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
             +++  L  P P+RM  +  A + G  ++EIHE+  ID WFL Q ++L+  E+ +    +
Sbjct: 417  AEIRRELANPGPERMLFVADAFRAGFTLEEIHEICAIDPWFLAQIEDLMKEEKAVSDGVL 476

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
            S++       +KR+GFSDK+IA      EKEVRE R  L + P YKRVDTCAAEF   T 
Sbjct: 477  SDLDYAALRRLKRKGFSDKRIAQLLDVKEKEVREHRYVLNLHPVYKRVDTCAAEFATETA 536

Query: 627  YMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSN 686
            Y+YS+Y+ ECE+ P+ +KKV+ILGGGPNRIGQGIEFDYCC H + +L+ +G+ETIM+N N
Sbjct: 537  YLYSTYEEECEARPSDRKKVMILGGGPNRIGQGIEFDYCCVHAALALRESGFETIMVNCN 596

Query: 687  PETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHR 746
            PETVSTD+DTSDRLYFEPLT+EDVL ++  E P G+IV +GGQTPLKL+           
Sbjct: 597  PETVSTDFDTSDRLYFEPLTLEDVLEIVRTENPWGVIVHYGGQTPLKLA----------- 645

Query: 747  LPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEIG 806
              +A  +  V I GTS DSIDAAEDRERF  ++ +L + QP   IA +E +AL  A+EIG
Sbjct: 646  --NALVENGVNIIGTSADSIDAAEDRERFQKVLNDLGLRQPPNRIAHNEEEALVKAEEIG 703

Query: 807  YPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALAD 866
            YP+VVRPSYVLGGRAM+IV++ E L  Y+  AV+V  + PVL+D +L++AIE+DVD ++D
Sbjct: 704  YPLVVRPSYVLGGRAMQIVHSAEQLQKYMREAVQVSEDSPVLLDFFLNNAIEVDVDCVSD 763

Query: 867  SCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNC 926
               +VVIGGIM+H+EQAG+HSGDS C +P  ++S    D I   T  +A  L V GLMN 
Sbjct: 764  G-KDVVIGGIMQHVEQAGIHSGDSGCSLPPYSLSEEIQDEIRRQTKAMAYALGVVGLMNV 822

Query: 927  QYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPKH 986
            Q+A+   G V++LE NPRASRTVPFVSKA G PLAK  A  M+G SL + G  KEV+P  
Sbjct: 823  QFAV-QDGVVFVLEVNPRASRTVPFVSKATGVPLAKVGARCMAGISLKEQGVEKEVVPDF 881

Query: 987  VSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVFL 1046
             +VKEAV PF KF G D +LGPEMRSTGEVMG+  SF  A+ KAQ+ AG++L  +G +FL
Sbjct: 882  YAVKEAVFPFIKFPGVDTILGPEMRSTGEVMGVGASFGEAYYKAQLGAGERLNPTGKIFL 941

Query: 1047 SLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVAN 1106
            S+ +  K  + + AK F  +G+ I +T GTA +L   G+ V+ + K+ EGRPH GD + N
Sbjct: 942  SVREEDKERVIKTAKNFQALGYGICATRGTAQYLTEHGLIVQTINKVPEGRPHIGDALKN 1001

Query: 1107 GQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRS 1156
            G+I ++V T S D     D   +R+  L  +VP  TT +G  A +E  +S
Sbjct: 1002 GEIALVVNTVSSDPQSVSDSHIIRQSALQQRVPQYTTTAGGEAMSEGAKS 1051


>gi|56478162|ref|YP_159751.1| carbamoyl phosphate synthase large subunit [Aromatoleum aromaticum
            EbN1]
 gi|56314205|emb|CAI08850.1| Carbamoyl-phosphate synthase large chain [Aromatoleum aromaticum
            EbN1]
          Length = 1075

 Score = 1249 bits (3233), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 636/1075 (59%), Positives = 802/1075 (74%), Gaps = 24/1075 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILI+GAGPI+IGQACEFDYSG QACKAL+EEGY+VIL+NSNPATIMTDP  AD
Sbjct: 3    KRTDIQSILIIGAGPIIIGQACEFDYSGAQACKALREEGYKVILVNSNPATIMTDPETAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+T ++VE ++EKERPDALLPTMGGQTALN A+ LA +G LEKYGVELIGA  DA
Sbjct: 63   VTYIEPITWQVVESIIEKERPDALLPTMGGQTALNCALDLARNGVLEKYGVELIGASRDA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  FK AM  IG+ +  S I ++++E + +   IG FP+IIRP+FTLGGTGGGI
Sbjct: 123  IDKAEDRLKFKDAMTKIGLGSARSAIAHSMEEALQVQGGIG-FPVIIRPSFTLGGTGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN EEF+ ICK GL AS TS++L+E+SL+GWKEYE+EV+RD ADN +I+CSIEN+DPMG
Sbjct: 182  AYNMEEFDEICKRGLEASPTSELLIEESLIGWKEYEMEVVRDRADNCIIVCSIENLDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAP+QTLTDKEYQ LR+ SIA++REIGV+ GGSNVQFA+NP DG ++VIEMN
Sbjct: 242  VHTGDSITVAPSQTLTDKEYQILRNASIAVLREIGVDTGGSNVQFAINPKDGRMIVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT   TPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGYTLDELKNDITGGATPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            FAFEKFP +   LTTQMKSVGE MA+GRTFQESFQKALR LE G  G     + E++ D 
Sbjct: 362  FAFEKFPMANDRLTTQMKSVGEVMAMGRTFQESFQKALRGLEVGAYG-----LDEVEADR 416

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
            E L++ L  P   R+  +  A ++G   +++  L+ ID WFL Q ++++  E+ L  +S+
Sbjct: 417  EDLEHELANPGAQRIWYVGQAFREGYTQEQLFNLTKIDPWFLAQIEDIVLTEKALTGRSL 476

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
              +   +  E+KR+GFSD+++A      E  VR  R + GV P +KRVDTCAAEF  +T 
Sbjct: 477  KALLAAELRELKRKGFSDRRLAKLLGVDETAVRLHRHANGVRPVFKRVDTCAAEFATSTA 536

Query: 627  YMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSN 686
            YMYSSY+ ECE+ PT KKK+++LGGGPNRIGQGIEFDYCC H + +L+  GYETIM+N N
Sbjct: 537  YMYSSYEDECEARPTDKKKIMVLGGGPNRIGQGIEFDYCCVHAALALREDGYETIMVNCN 596

Query: 687  PETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHR 746
            PETVSTDYDTSDRLYFEP+T+ED+L ++ +E+P G+IVQFGGQTPLK +    Q L+++ 
Sbjct: 597  PETVSTDYDTSDRLYFEPITLEDILEIVHVEKPVGVIVQFGGQTPLKRA----QALEDNG 652

Query: 747  LPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEIG 806
            +P         I GTSPD IDAAEDRERF  ++ +L ++QP    A++   A+ +A EIG
Sbjct: 653  VP---------IIGTSPDMIDAAEDRERFQKLLNDLGLKQPPNRTARTPEAAVRLAAEIG 703

Query: 807  YPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALAD 866
            YP+VVRPSYVLGGRAMEIV+  + L  Y+  AV+V  E PVL+D++L+DA E+DVDAL+D
Sbjct: 704  YPLVVRPSYVLGGRAMEIVHEQKDLERYMREAVKVSNESPVLLDRFLNDATEVDVDALSD 763

Query: 867  SCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNC 926
                V+IGGIMEHIEQAGVHSGDSAC +P  T+S+   D +   T  +A+ LNVCGLMN 
Sbjct: 764  G-RQVIIGGIMEHIEQAGVHSGDSACSLPPYTLSAKLQDELRRQTEAMARALNVCGLMNV 822

Query: 927  QYAITTSGD---VYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVI 983
            Q+AI   GD   VY+LE NPRASRTVPFVSKA G  LAK AA  M+G+SL   G T E++
Sbjct: 823  QFAIQGDGDEATVYVLEVNPRASRTVPFVSKACGLQLAKIAARCMAGQSLASQGVTTEIV 882

Query: 984  PKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGT 1043
            P + +VKEAV PF KF G D +LGPEM+STGEVMG+  SF  AF K+Q+AAG +LP SGT
Sbjct: 883  PPYYAVKEAVFPFVKFPGVDTILGPEMKSTGEVMGVGRSFAEAFVKSQLAAGVRLPQSGT 942

Query: 1044 VFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDM 1103
             F+S+    +     +A+   ++GF + +T GT   +E  G+ V  V K++EGRPH  DM
Sbjct: 943  AFISVKPTDRGVAVEVARELHELGFGLAATRGTGSAIEAAGLPVTLVNKVNEGRPHIVDM 1002

Query: 1104 VANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLK 1158
            + N +I +++ T        ID   +R   LA K+ V TT+ GA A    +R L+
Sbjct: 1003 IKNNEISLVINTVEEKRQAIIDSRSIRTSALAAKLTVFTTIEGARAACMGMRHLE 1057



 Score =  253 bits (647), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 171/502 (34%), Positives = 261/502 (51%), Gaps = 54/502 (10%)

Query: 52  QLTRYSRSRVRASSAKIDS-SAELSNGAA----SSKDQKLGKRTDLRKILILGAGPIVIG 106
           +L R++   VR    ++D+ +AE +   A    S +D+   + TD +KI++LG GP  IG
Sbjct: 509 RLHRHANG-VRPVFKRVDTCAAEFATSTAYMYSSYEDECEARPTDKKKIMVLGGGPNRIG 567

Query: 107 QACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLADRTYITPMTPELVEQVLEKE 166
           Q  EFDY    A  AL+E+GYE I++N NP T+ TD   +DR Y  P+T E + +++  E
Sbjct: 568 QGIEFDYCCVHAALALREDGYETIMVNCNPETVSTDYDTSDRLYFEPITLEDILEIVHVE 627

Query: 167 RPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDAIKKAEDRDLFKQAMKTIGV 226
           +P  ++   GGQT L  A       ALE  GV +IG   D I  AEDR+ F++ +  +G+
Sbjct: 628 KPVGVIVQFGGQTPLKRA------QALEDNGVPIIGTSPDMIDAAEDRERFQKLLNDLGL 681

Query: 227 KTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGIAYNKEEFEAICKAGLAASL 286
           K PP+    T +  + +A EIG +PL++RP++ LGG    I + +++ E   +  +  S 
Sbjct: 682 KQPPNRTARTPEAAVRLAAEIG-YPLVVRPSYVLGGRAMEIVHEQKDLERYMREAVKVSN 740

Query: 287 TSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMGVHTGDSITVAPAQTLTDKE 346
            S VL+++ L    E +++ + D    V+I   +E+++  GVH+GDS    P  TL+ K 
Sbjct: 741 ESPVLLDRFLNDATEVDVDALSD-GRQVIIGGIMEHIEQAGVHSGDSACSLPPYTLSAKL 799

Query: 347 YQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGE---VMVIEMNPRVSRSSALASKATGF 403
              LR  + A+ R + V CG  NVQFA+   DG+   V V+E+NPR SR+    SKA G 
Sbjct: 800 QDELRRQTEAMARALNV-CGLMNVQFAIQG-DGDEATVYVLEVNPRASRTVPFVSKACGL 857

Query: 404 PIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRFAFEKFPGSEPLLTTQM 463
            +AK+AA+   G SL       ++       P   Y   K   F F KFPG + +L  +M
Sbjct: 858 QLAKIAARCMAGQSL------ASQGVTTEIVPP--YYAVKEAVFPFVKFPGVDTILGPEM 909

Query: 464 KSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDWEQLKYSLRVPNPDRMQA 523
           KS GE M +GR+F E+F K+                        QL   +R+P       
Sbjct: 910 KSTGEVMGVGRSFAEAFVKS------------------------QLAAGVRLPQSGTAFI 945

Query: 524 IYAAMKKGMKVD---EIHELSF 542
                 +G+ V+   E+HEL F
Sbjct: 946 SVKPTDRGVAVEVARELHELGF 967


>gi|218767563|ref|YP_002342075.1| carbamoyl phosphate synthase large subunit [Neisseria meningitidis
            Z2491]
 gi|433480614|ref|ZP_20437895.1| carbamoyl-phosphate synthase, large subunit [Neisseria meningitidis
            63041]
 gi|433520588|ref|ZP_20477299.1| carbamoyl-phosphate synthase, large subunit [Neisseria meningitidis
            65014]
 gi|433541770|ref|ZP_20498212.1| carbamoyl-phosphate synthase, large subunit [Neisseria meningitidis
            63006]
 gi|22095531|sp|Q9JW02.1|CARB_NEIMA RecName: Full=Carbamoyl-phosphate synthase large chain; AltName:
            Full=Carbamoyl-phosphate synthetase ammonia chain
 gi|121051571|emb|CAM07869.1| carbamoyl phosphate synthase large subunit [Neisseria meningitidis
            Z2491]
 gi|432213891|gb|ELK69801.1| carbamoyl-phosphate synthase, large subunit [Neisseria meningitidis
            63041]
 gi|432251925|gb|ELL07286.1| carbamoyl-phosphate synthase, large subunit [Neisseria meningitidis
            65014]
 gi|432275722|gb|ELL30790.1| carbamoyl-phosphate synthase, large subunit [Neisseria meningitidis
            63006]
          Length = 1071

 Score = 1249 bits (3233), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 623/1070 (58%), Positives = 793/1070 (74%), Gaps = 22/1070 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTDL+ ILI+GAGPIVIGQACEFDYSG QACKAL+EEGY+VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDLKSILIIGAGPIVIGQACEFDYSGAQACKALREEGYKVILVNSNPATIMTDPEMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  + VE+++ KERPDA+LPTMGGQTALN A+ LA +G L KY VELIGA  DA
Sbjct: 63   VTYIEPIMWQTVEKIIAKERPDAILPTMGGQTALNCALDLARNGVLAKYNVELIGATEDA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  FK+AM+ IG+  P S + +T++E ++   ++G FP +IRP+FT+GG+GGGI
Sbjct: 123  IDKAEDRGRFKEAMEKIGLSCPKSFVCHTMNEALAAQEQVG-FPTLIRPSFTMGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYNK+EF AIC+ G  AS T ++L+E+S+LGWKEYE+EV+RD  DN +IICSIEN DPMG
Sbjct: 182  AYNKDEFLAICERGFDASPTHELLIEQSVLGWKEYEMEVVRDKNDNCIIICSIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGV+ GGSNVQFAVNP +GE++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQIMRNASLAVLREIGVDTGGSNVQFAVNPENGEMIVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VG++LD++ NDIT  +TPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGFTLDELRNDITGGRTPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            FAFEKFP ++  LTTQMKSVGE MA+GRT QESFQKALR LE G  G+   +      D 
Sbjct: 362  FAFEKFPAADDRLTTQMKSVGEVMAMGRTIQESFQKALRGLETGLCGFNPRS-----SDK 416

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
             +++  L  P P+RM  +  A + G  ++EIHE+  ID WFL Q ++L+  E+ +    +
Sbjct: 417  AEIRRELANPGPERMLFVADAFRAGFTLEEIHEICAIDPWFLAQIEDLMKEEKAVSDGVL 476

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
            S++       +KR+GFSDK+IA      EKEVRE R  L + P YKRVDTCAAEF   T 
Sbjct: 477  SDLDYAALRRLKRKGFSDKRIAQLLDVKEKEVREHRYVLNLHPVYKRVDTCAAEFATETA 536

Query: 627  YMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSN 686
            Y+YS+Y+ ECE+ P+ +KKV+ILGGGPNRIGQGIEFDYCC H + +L+ +G+ETIM+N N
Sbjct: 537  YLYSTYEEECEARPSDRKKVMILGGGPNRIGQGIEFDYCCVHAALALRESGFETIMVNCN 596

Query: 687  PETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHR 746
            PETVSTD+DTSDRLYFEPLT+EDVL ++  E P G+IV +GGQTPLKL+           
Sbjct: 597  PETVSTDFDTSDRLYFEPLTLEDVLEIVRTENPWGVIVHYGGQTPLKLA----------- 645

Query: 747  LPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEIG 806
              +A  +  V I GTS DSIDAAEDRERF  ++ +L + QP   IA +E +AL  A+EIG
Sbjct: 646  --NALVENGVNIIGTSADSIDAAEDRERFQKVLNDLGLRQPPNRIAHNEEEALVKAEEIG 703

Query: 807  YPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALAD 866
            YP+VVRPSYVLGGRAM+IV++ E L  Y+  AV+V  + PVL+D +L++AIE+DVD ++D
Sbjct: 704  YPLVVRPSYVLGGRAMQIVHSAEQLQKYMREAVQVSEDSPVLLDFFLNNAIEVDVDCVSD 763

Query: 867  SCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNC 926
               +VVIGGIM+H+EQAG+HSGDS C +P  ++S    D I   T  +A  L V GLMN 
Sbjct: 764  G-KDVVIGGIMQHVEQAGIHSGDSGCSLPPYSLSEEIQDEIRRQTKAMAYALGVVGLMNV 822

Query: 927  QYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPKH 986
            Q+A+   G V++LE NPRASRTVPFVSKA G PLAK  A  M+G SL + G  KEV+P  
Sbjct: 823  QFAV-QDGVVFVLEVNPRASRTVPFVSKATGVPLAKVGARCMAGISLKEQGVEKEVVPDF 881

Query: 987  VSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVFL 1046
             +VKEAV PF KF G D +LGPEMRSTGEVMG+  SF  A+ KAQ+ AG++L  +G +FL
Sbjct: 882  YAVKEAVFPFIKFPGVDTILGPEMRSTGEVMGVGASFGEAYYKAQLGAGERLNPTGKIFL 941

Query: 1047 SLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVAN 1106
            S+ +  K  + + AK F  +G+ I +T GTA +L   G+ V+ + K+ EGRPH GD + N
Sbjct: 942  SVREEDKERVIKTAKNFQALGYGICATRGTAQYLTEHGLIVQTINKVPEGRPHIGDALKN 1001

Query: 1107 GQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRS 1156
            G+I ++V T S D     D   +R+  L  +VP  TT +G  A +E  +S
Sbjct: 1002 GEIALVVNTVSSDPQSVSDSHIIRQSALQQRVPQYTTTAGGEAMSEGAKS 1051


>gi|433505757|ref|ZP_20462688.1| carbamoyl-phosphate synthase, large subunit [Neisseria meningitidis
            9506]
 gi|432239242|gb|ELK94800.1| carbamoyl-phosphate synthase, large subunit [Neisseria meningitidis
            9506]
          Length = 1071

 Score = 1249 bits (3232), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 625/1070 (58%), Positives = 793/1070 (74%), Gaps = 22/1070 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTDL+ ILI+GAGPIVIGQACEFDYSG QACKAL+EEGY+VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDLKSILIIGAGPIVIGQACEFDYSGAQACKALREEGYKVILVNSNPATIMTDPEMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  + VE+++ KERPDA+LPTMGGQTALN A+ LA +G L KY VELIGA  DA
Sbjct: 63   VTYIEPIMWQTVEKIIAKERPDAILPTMGGQTALNCALDLARNGVLAKYNVELIGATEDA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  FK+AM+ IG+  P S + +T++E ++   ++G FP +IRP+FT+GG+GGGI
Sbjct: 123  IDKAEDRGRFKEAMEKIGLSCPKSFVCHTMNEALAAQEQVG-FPTLIRPSFTMGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYNK+EF AIC+ G  AS T ++L+E+S+LGWKEYE+EV+RD  DN +IICSIEN DPMG
Sbjct: 182  AYNKDEFLAICERGFDASPTHELLIEQSVLGWKEYEMEVVRDKNDNCIIICSIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGV+ GGSNVQFAVNP +GE++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQIMRNASLAVLREIGVDTGGSNVQFAVNPENGEMIVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VG++LD++ NDIT  KTPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGFTLDELRNDITGGKTPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            FAFEKFP ++  LTTQMKSVGE MA+GRT QESFQKALR LE G  G+   +      D 
Sbjct: 362  FAFEKFPAADDRLTTQMKSVGEVMAMGRTIQESFQKALRGLETGLCGFNPRS-----SDK 416

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
             +++  L  P P+RM  +  A + G   +EIHE+  ID WFL Q ++L+  E+ +    +
Sbjct: 417  AEIRRELANPGPERMLFVADAFRAGFTPEEIHEICAIDPWFLAQIEDLVKEEKSVSDGIL 476

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
            S++       +KR+GFSDK+IA      EKEVRE R +L + P YKRVDTCAAEF   T 
Sbjct: 477  SDLDFAALRRLKRKGFSDKRIAQLLGVKEKEVREHRYALKLHPVYKRVDTCAAEFATETA 536

Query: 627  YMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSN 686
            Y+YS+Y+ ECES P+ +KKV+ILGGGPNRIGQGIEFDYCC H + +L+ +G+ETIM+N N
Sbjct: 537  YLYSTYEEECESRPSDRKKVMILGGGPNRIGQGIEFDYCCVHAALALRESGFETIMVNCN 596

Query: 687  PETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHR 746
            PETVSTD+DTSDRLYFEPLT+EDVL ++  E P G+IV +GGQTPLKL+           
Sbjct: 597  PETVSTDFDTSDRLYFEPLTLEDVLEIVRTENPWGVIVHYGGQTPLKLA----------- 645

Query: 747  LPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEIG 806
              +A  +  V I GTS DSIDAAEDRERF  ++ +L + QP   IA +E +AL  A+EIG
Sbjct: 646  --NALVENGVNIIGTSADSIDAAEDRERFQKVLNDLGLRQPPNRIAHNEEEALVKAEEIG 703

Query: 807  YPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALAD 866
            YP+VVRPSYVLGGRAM+IV++ E L  Y+  AV+V  + PVL+D +L++AIE+DVD ++D
Sbjct: 704  YPLVVRPSYVLGGRAMQIVHSAEALQKYMREAVQVSEDSPVLLDFFLNNAIEVDVDCVSD 763

Query: 867  SCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNC 926
               +VVIGGIM+H+EQAG+HSGDS C +P  ++S    D I   T  +A  L V GLMN 
Sbjct: 764  G-KDVVIGGIMQHVEQAGIHSGDSGCSLPPYSLSEEIQDEIRRQTKAMAYALGVVGLMNV 822

Query: 927  QYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPKH 986
            Q+A+   G V++LE NPRASRTVPFVSKA G PLAK  A  M+G SL + G  KEV+P  
Sbjct: 823  QFAV-QDGVVFVLEVNPRASRTVPFVSKATGVPLAKVGARCMAGISLKEQGVEKEVVPDF 881

Query: 987  VSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVFL 1046
             +VKEAV PF KF G D +LGPEMRSTGEVMG+  SF  A+ KAQ+ AG++L  +G +FL
Sbjct: 882  YAVKEAVFPFIKFPGVDTILGPEMRSTGEVMGVGASFGEAYYKAQLGAGERLNPTGKIFL 941

Query: 1047 SLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVAN 1106
            S+ +  K  + + AK F  +G+ I +T GTA +L   G+ V+ + K+ EGRPH GD + N
Sbjct: 942  SVREEDKERVIKTAKNFQALGYGICATRGTAQYLTEHGLIVQTINKVPEGRPHIGDALKN 1001

Query: 1107 GQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRS 1156
            G+I ++V T S D     D   +R+  L  +VP  TT +G  A +E  +S
Sbjct: 1002 GEIALVVNTVSSDPQSVSDSHIIRQSALQQRVPQYTTTAGGEAMSEGAKS 1051


>gi|384084011|ref|ZP_09995186.1| carbamoyl-phosphate synthase large subunit [Acidithiobacillus
            thiooxidans ATCC 19377]
          Length = 1072

 Score = 1249 bits (3232), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 617/1083 (56%), Positives = 800/1083 (73%), Gaps = 16/1083 (1%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            K  D+  +L++GAGPIVIGQACEFDYSG QACKAL+EEG  VIL+NSNPATIMTD   AD
Sbjct: 3    KHQDIHSVLLIGAGPIVIGQACEFDYSGVQACKALREEGCRVILVNSNPATIMTDAQTAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  + V +++E ERPDA+LPTMGGQTALN A+ L   G LEK+GV LIGA ++A
Sbjct: 63   ATYIEPVEWQTVARIIEMERPDAILPTMGGQTALNCALDLHREGILEKFGVRLIGASVEA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I++AEDR LFK+AM+ IG++   S  G+ +D    IA +IG FP+IIRP+FTLGGTGGGI
Sbjct: 123  IREAEDRGLFKKAMQEIGLEVARSAFGHDMDGARQIAEDIG-FPVIIRPSFTLGGTGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEFE I   GL AS T ++L+E+S++GWKE+E+EV+RD ADN +I+CSIEN+DPMG
Sbjct: 182  AYNREEFEDIASRGLEASPTHEILIEESIIGWKEFEMEVVRDQADNCIIVCSIENMDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            +HTGDSITVAPAQTLTD+EYQR+RD SIA++R IGV+ GGSNVQFAVNPVDG +++IEMN
Sbjct: 242  IHTGDSITVAPAQTLTDREYQRMRDASIAVLRRIGVDTGGSNVQFAVNPVDGRLIIIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRF 447
            PRVSRSSALASKATGFPIAK+AAKL++GY+LD++ NDIT+ TPASFEP+IDYVVTKIPRF
Sbjct: 302  PRVSRSSALASKATGFPIAKIAAKLALGYTLDELRNDITQATPASFEPTIDYVVTKIPRF 361

Query: 448  AFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDWE 507
            AFEKFP ++  LTTQMKSVGE MA+GR+FQES QKALR LE G  G             +
Sbjct: 362  AFEKFPEADAHLTTQMKSVGEVMAIGRSFQESLQKALRGLETGVDGLDEKLPGNDPETLQ 421

Query: 508  QLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSVS 567
            +L+  LR+  PDR+  +  A+++G   D+I +++ ID WFL Q  EL+  E+ L    ++
Sbjct: 422  RLEQELRIAGPDRLWYLADAIRRGWDQDKIQQITHIDPWFLEQIIELVQQEEKLRGMPLA 481

Query: 568  NMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTPY 627
            ++       +K  GFSD+++A      E ++RE+R  LG+ P YKRVDTCAAEF + TPY
Sbjct: 482  SLDASHLRALKAMGFSDRRLARLLGCRESQMREQRHKLGIRPVYKRVDTCAAEFHSPTPY 541

Query: 628  MYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSNP 687
            +YS+Y+ ECE+ P  K K++ILGGGPNRIGQGIEFDYCC H S +L + G+ETIM+N NP
Sbjct: 542  LYSTYEMECEAEPGSKPKIMILGGGPNRIGQGIEFDYCCVHASMALHADGFETIMVNCNP 601

Query: 688  ETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHRL 747
            ETVSTDYDTSDRLYFEPLT+EDVL ++ +E+P+G+IVQFGGQTPLKL+  +         
Sbjct: 602  ETVSTDYDTSDRLYFEPLTLEDVLEIVAVEKPQGVIVQFGGQTPLKLANDLE-------- 653

Query: 748  PSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEIGY 807
              A+G   V I GT+PDSID AEDRERF  +++ L + QP+  IA+S  +AL+ A+E+GY
Sbjct: 654  --AAG---VPIIGTTPDSIDLAEDRERFQQLLQRLGLRQPENAIARSAPEALSKARELGY 708

Query: 808  PVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALADS 867
            P+VVRPSYVLGGRAM IVY +  L  Y+E AV +  ++P+L+D++L+DA+E+D+DA+AD 
Sbjct: 709  PLVVRPSYVLGGRAMRIVYAEADLQRYMEEAVRISNDQPILLDRFLNDALEVDIDAVADQ 768

Query: 868  CGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNCQ 927
             G V++ GIMEHIEQAGVHSGDSAC +P  ++  +    +   T++LA  L V GLMNCQ
Sbjct: 769  DGQVIVAGIMEHIEQAGVHSGDSACCLPPYSLPENIQIELRRQTVELALALGVVGLMNCQ 828

Query: 928  YAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPKHV 987
            +A+     +Y+LE NPRASRTVPFVSKA G  LAK A+  M+G+SL + G  +   P H 
Sbjct: 829  FAVQED-RIYVLEVNPRASRTVPFVSKATGWQLAKIASRCMTGQSLKNQGIPEIPNPPHF 887

Query: 988  SVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVFLS 1047
            SVKEAV PF KF G D+LLGPEM+STGEVMGI  SF  AF KAQ+ AG+  P SGTVF+S
Sbjct: 888  SVKEAVFPFIKFPGVDILLGPEMKSTGEVMGIGASFGEAFLKAQMGAGEHFPSSGTVFIS 947

Query: 1048 LNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVANG 1107
            + D  K  L   A+    +GF++++T GTA  L  +G+ V  V K+ EGRPH  D + NG
Sbjct: 948  VRDADKVKLTPAARTLAHLGFQLIATKGTAEHLRQQGLEVSTVNKVTEGRPHIVDAIKNG 1007

Query: 1108 QIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTVTMTAL 1167
            ++Q ++I +  +     D   +RR  L   +   TT++GA+A AEAIR+L     ++  L
Sbjct: 1008 KVQ-IIINTVDERQSVRDSFSIRRAALQMGLTYYTTLAGAIAGAEAIRALMREERSVLRL 1066

Query: 1168 QDF 1170
            QD 
Sbjct: 1067 QDL 1069


>gi|385341298|ref|YP_005895169.1| carbamoyl-phosphate synthase large subunit [Neisseria meningitidis
            M01-240149]
 gi|385856595|ref|YP_005903107.1| carbamoyl-phosphate synthase large subunit [Neisseria meningitidis
            NZ-05/33]
 gi|416174326|ref|ZP_11609160.1| carbamoyl-phosphate synthase, large subunit [Neisseria meningitidis
            OX99.30304]
 gi|416189065|ref|ZP_11615081.1| carbamoyl-phosphate synthase, large subunit [Neisseria meningitidis
            M0579]
 gi|325129512|gb|EGC52339.1| carbamoyl-phosphate synthase, large subunit [Neisseria meningitidis
            OX99.30304]
 gi|325135635|gb|EGC58252.1| carbamoyl-phosphate synthase, large subunit [Neisseria meningitidis
            M0579]
 gi|325201504|gb|ADY96958.1| carbamoyl-phosphate synthase, large subunit [Neisseria meningitidis
            M01-240149]
 gi|325207484|gb|ADZ02936.1| carbamoyl-phosphate synthase, large subunit [Neisseria meningitidis
            NZ-05/33]
          Length = 1071

 Score = 1249 bits (3232), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 625/1070 (58%), Positives = 793/1070 (74%), Gaps = 22/1070 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTDL+ ILI+GAGPIVIGQACEFDYSG QACKAL+EEGY+VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDLKSILIIGAGPIVIGQACEFDYSGAQACKALREEGYKVILVNSNPATIMTDPEMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  + VE+++ KERPDA+LPTMGGQTALN A+ LA +G L KY VELIGA  DA
Sbjct: 63   VTYIEPIMWQTVEKIIAKERPDAILPTMGGQTALNCALDLARNGVLAKYNVELIGATEDA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  FK+AM+ IG+  P S + +T++E ++   ++G FP +IRP+FT+GG+GGGI
Sbjct: 123  IDKAEDRGRFKEAMEKIGLSCPKSFVCHTMNEALAAQEQVG-FPTLIRPSFTMGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYNK+EF AIC+ G  AS T ++L+E+S+LGWKEYE+EV+RD  DN +IICSIEN DPMG
Sbjct: 182  AYNKDEFLAICERGFDASPTHELLIEQSVLGWKEYEMEVVRDKNDNCIIICSIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGV+ GGSNVQFAVNP +GE++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQIMRNASLAVLREIGVDTGGSNVQFAVNPENGEMIVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VG++LD++ NDIT  KTPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGFTLDELRNDITGGKTPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            FAFEKFP ++  LTTQMKSVGE MA+GRT QESFQKALR LE G  G+   +      D 
Sbjct: 362  FAFEKFPAADDRLTTQMKSVGEVMAMGRTIQESFQKALRGLETGLCGFNPRS-----SDK 416

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
             +++  L  P P+RM  +  A + G   +EIHE+  ID WFL Q ++L+  E+ +    +
Sbjct: 417  AEIRRELANPGPERMLFVADAFRAGFTPEEIHEICAIDPWFLAQIEDLVKEEKSVSDGIL 476

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
            S++       +KR+GFSDK+IA      EKEVRE R +L + P YKRVDTCAAEF   T 
Sbjct: 477  SDLDFAALRRLKRKGFSDKRIAQLLGVKEKEVREHRYALKLHPVYKRVDTCAAEFATETA 536

Query: 627  YMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSN 686
            Y+YS+Y+ ECES P+ +KKV+ILGGGPNRIGQGIEFDYCC H + +L+ +G+ETIM+N N
Sbjct: 537  YLYSTYEEECESRPSDRKKVMILGGGPNRIGQGIEFDYCCVHAALALRESGFETIMVNCN 596

Query: 687  PETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHR 746
            PETVSTD+DTSDRLYFEPLT+EDVL ++  E P G+IV +GGQTPLKL+           
Sbjct: 597  PETVSTDFDTSDRLYFEPLTLEDVLEIVRTENPWGVIVHYGGQTPLKLA----------- 645

Query: 747  LPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEIG 806
              +A  +  V I GTS DSIDAAEDRERF  ++ +L + QP   IA +E +AL  A+EIG
Sbjct: 646  --NALVENGVNIIGTSADSIDAAEDRERFQKVLNDLGLRQPPNRIAHNEEEALVKAEEIG 703

Query: 807  YPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALAD 866
            YP+VVRPSYVLGGRAM+IV++ E L  Y+  AV+V  + PVL+D +L++AIE+DVD ++D
Sbjct: 704  YPLVVRPSYVLGGRAMQIVHSAEALQKYMREAVQVSEDSPVLLDFFLNNAIEVDVDCVSD 763

Query: 867  SCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNC 926
               +VVIGGIM+H+EQAG+HSGDS C +P  ++S    D I   T  +A  L V GLMN 
Sbjct: 764  G-KDVVIGGIMQHVEQAGIHSGDSGCSLPPYSLSEEIQDEIRRQTKAMAYALGVVGLMNV 822

Query: 927  QYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPKH 986
            Q+A+   G V++LE NPRASRTVPFVSKA G PLAK  A  M+G SL + G  KEV+P  
Sbjct: 823  QFAV-QDGVVFVLEVNPRASRTVPFVSKATGVPLAKVGARCMAGISLKEQGVEKEVVPDF 881

Query: 987  VSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVFL 1046
             +VKEAV PF KF G D +LGPEMRSTGEVMG+  SF  A+ KAQ+ AG++L  +G +FL
Sbjct: 882  YAVKEAVFPFIKFPGVDTILGPEMRSTGEVMGVGASFGEAYYKAQLGAGERLNPTGKIFL 941

Query: 1047 SLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVAN 1106
            S+ +  K  + + AK F  +G+ I +T GTA +L   G+ V+ + K+ EGRPH GD + N
Sbjct: 942  SVREEDKERVIKTAKNFQALGYGICATRGTAQYLTEHGLIVQTINKVPEGRPHIGDALKN 1001

Query: 1107 GQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRS 1156
            G+I ++V T S D     D   +R+  L  +VP  TT +G  A +E  +S
Sbjct: 1002 GEIALVVNTVSSDPQSVSDSHIIRQSALQQRVPQYTTTAGGEAMSEGAKS 1051


>gi|219849332|ref|YP_002463765.1| carbamoyl-phosphate synthase large subunit [Chloroflexus aggregans
            DSM 9485]
 gi|219543591|gb|ACL25329.1| carbamoyl-phosphate synthase, large subunit [Chloroflexus aggregans
            DSM 9485]
          Length = 1096

 Score = 1249 bits (3232), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 648/1113 (58%), Positives = 816/1113 (73%), Gaps = 43/1113 (3%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTDL  ILI+G+GPIVIGQACEFDYSGTQACKAL+EEGY V+L+NSNPATIMTDPGLAD
Sbjct: 3    KRTDLHTILIIGSGPIVIGQACEFDYSGTQACKALREEGYRVVLVNSNPATIMTDPGLAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+T   +E+++ +ERPDALLPT+GGQTALNLAVAL E+G L+KYGVELIGA ++A
Sbjct: 63   ATYIEPLTVPSLERIIARERPDALLPTVGGQTALNLAVALHEAGILDKYGVELIGASVEA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            ++ AEDR  FK  M  IG++ P SG   TLDE +++  + G FP IIRP+FTLGG GGGI
Sbjct: 123  VRIAEDRQRFKDKMIEIGLQVPRSGTATTLDEALAVVAQTG-FPAIIRPSFTLGGEGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN EEF AI + GL AS  SQVL+E+S+LGWKE+ELEVMRD  DN VIICSIEN+DPMG
Sbjct: 182  AYNMEEFRAIVERGLDASPVSQVLIEESVLGWKEFELEVMRDRNDNGVIICSIENIDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPA TLTD+EY+R+RD  +A++R +GVE GGSNVQFAV+P DG + VIEMN
Sbjct: 242  VHTGDSITVAPAMTLTDREYERMRDMGLAVLRAVGVETGGSNVQFAVSPTDGRIYVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRF 447
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++PNDIT++TPASFEP++DYVV KIPRF
Sbjct: 302  PRVSRSSALASKATGFPIAKIAAKLAVGYTLDELPNDITRETPASFEPTLDYVVVKIPRF 361

Query: 448  AFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDWE 507
             FEKFP ++  LTT MKSVGE MA+GRTF E+FQKA RSLE G +GWG      +  + E
Sbjct: 362  TFEKFPQADQTLTTSMKSVGEVMAIGRTFPEAFQKAWRSLEQGRAGWGADGHDAI--EPE 419

Query: 508  QLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSVS 567
            +L+  L  P+PDRM  +  A++ GM V++I  L+ ID WF+ Q ++L+++E  L    ++
Sbjct: 420  RLRERLITPHPDRMFYVRYALQSGMSVEQISALTKIDPWFIRQLEQLVNLEGRLRAFDLN 479

Query: 568  NMTKDDFYEVKRRGFSDKQIAFATK--------STEKEVREKRLSLGVIPSYKRVDTCAA 619
             +  D   + KR GFSD Q+A   +        S E  VR++RL LG+ P++ RVDTCAA
Sbjct: 480  TIPPDLLRQAKRMGFSDAQLAHLLRVPPGPQRWSAELAVRKRRLELGIRPTFHRVDTCAA 539

Query: 620  EFEANTPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYE 679
            EF A TPY+YSSY+ E ES PT +KKV+ILG GPNRIGQGIEFDYCC H  F L++ GYE
Sbjct: 540  EFPAFTPYLYSSYESEDESEPTDRKKVVILGSGPNRIGQGIEFDYCCSHAVFGLRALGYE 599

Query: 680  TIMMNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIH 739
            TIM+N NPETVSTDYDT+DRLYFEPLT+EDVLNV++ ERP+G+I+QFGGQTPLKL+    
Sbjct: 600  TIMVNCNPETVSTDYDTADRLYFEPLTLEDVLNVVEEERPDGVIIQFGGQTPLKLA---- 655

Query: 740  QYLDEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADAL 799
                  R   A G   V IWGT P++ID AEDR+RF A++KEL+I  P+ G A S  +AL
Sbjct: 656  ------RALEAVG---VPIWGTMPEAIDLAEDRDRFGALLKELNIPAPEHGSATSWEEAL 706

Query: 800  AIAKEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEI 859
            ++A+ IGYPVVVRPSYVLGGRAM IVY D +L  Y+  AV   PE PVLID++L DA E+
Sbjct: 707  SVARRIGYPVVVRPSYVLGGRAMAIVYDDASLERYMREAVAASPEHPVLIDRFLEDAFEM 766

Query: 860  DVDALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLN 919
            DVDA+ D    VVI GIME IE AGVHSGDSAC+IPT  ++   + T+  +T +LA+ L 
Sbjct: 767  DVDAVCDG-ETVVIAGIMEQIELAGVHSGDSACVIPTYMVAEEHVATMRRYTEQLARALG 825

Query: 920  VCGLMNCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLN-DLGF 978
            V GLMN QYA+   G VY+LE NPRASRTVPFV+KA G P A+ A    +G  L  + G 
Sbjct: 826  VVGLMNIQYAM-KDGVVYVLEVNPRASRTVPFVAKATGVPWAQLAVQCAAGARLRYEHGR 884

Query: 979  TKEVIPKHVS---------------VKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSF 1023
             + V P  V+               VKE VLP+ +F G D LLGPEM+STGE MG   +F
Sbjct: 885  IQMVHPALVNSPRYRLDVTSEQRYHVKEVVLPWSRFSGVDTLLGPEMKSTGEGMGSGATF 944

Query: 1024 PIAFAKAQIAAGQKLPLSGTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELK 1083
              AFAKAQ+A    LP SG  FLS+ND  K +L  IA+    +GFK+++TSGTA FL+  
Sbjct: 945  GEAFAKAQMACNSHLPTSGNAFLSVNDRDKANLLPIARDLAALGFKLLATSGTAAFLQQH 1004

Query: 1084 GIAVERVLKMHEGRPHAGDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITT 1143
            G+ V+ + K++EGRP+A D + NG+I ++V T  G +    D   +RR  + Y VP +TT
Sbjct: 1005 GLDVKPIYKVNEGRPNAVDYIKNGEIALIVNTPLGKA-SFFDEGAIRRAAIVYGVPTLTT 1063

Query: 1144 VSGALANAEAIRSLKSNTVTMTALQDFFDVETA 1176
            +SGA A  +AI+++++   T+ +LQ+   +E A
Sbjct: 1064 LSGAAAAVQAIQAIRAGRWTLQSLQERSALEKA 1096


>gi|88812985|ref|ZP_01128228.1| Carbamoyl-phosphate synthase, large subunit, glutamine-dependent
            [Nitrococcus mobilis Nb-231]
 gi|88789763|gb|EAR20887.1| Carbamoyl-phosphate synthase, large subunit, glutamine-dependent
            [Nitrococcus mobilis Nb-231]
          Length = 1073

 Score = 1249 bits (3232), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 625/1090 (57%), Positives = 802/1090 (73%), Gaps = 20/1090 (1%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD+  ILI+GAGPIVIGQACEFDYSG QACKAL+EEGY V+L+NSNPATIMTDP  AD
Sbjct: 3    KRTDISSILIIGAGPIVIGQACEFDYSGAQACKALREEGYRVVLVNSNPATIMTDPQTAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
            R YI P+    V  V+ +ERPDALLPTMGGQTALN A+ LA+ G L++Y VE+IGA+  A
Sbjct: 63   RVYIEPINWRTVASVIARERPDALLPTMGGQTALNCALDLAKHGVLDEYRVEMIGARQAA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR+ F+ AM  IG+ TP + I ++ +E + +  +IG FP IIRP+FTLGG+GGGI
Sbjct: 123  IDKAEDREAFRTAMADIGLLTPRARIAHSREEALQVQAQIG-FPTIIRPSFTLGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEF  I + GL  S T++VL+E+S+LGWKEYELEV+RD +DN +IICSIENVD MG
Sbjct: 182  AYNREEFVEIVECGLDLSPTNEVLLEESVLGWKEYELEVVRDHSDNCIIICSIENVDSMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            +HTGDSITVAPAQTLTDKEYQ +RD +IA++REIGVE GGSNVQFAVNP +G+++VIEMN
Sbjct: 242  IHTGDSITVAPAQTLTDKEYQLMRDAAIAVLREIGVETGGSNVQFAVNPANGQMVVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIA++AAKL+VGY+LD++ N+IT   TP SFEP+IDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIARVAAKLAVGYTLDELRNEITGGATPTSFEPTIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            F FEKF  ++P+LTTQMKSVGE MA+GRTFQESFQKALR LE    G       E +   
Sbjct: 362  FTFEKFQNAQPVLTTQMKSVGEIMAIGRTFQESFQKALRGLENDLDGLDERTDFESEEAH 421

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
             ++ + LRVP P+R+  I  A++ G  V+ ++EL+ ID WFL Q +ELI+VE  +     
Sbjct: 422  ARIIHELRVPGPERILWIGDALRAGYSVERVYELTAIDPWFLAQIQELIEVENTVRQLGE 481

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
              + +   + +K+RGFSD ++A     TE EVR +R +L + P YKRVD+CAAEF ++T 
Sbjct: 482  QALERTSLFALKQRGFSDGRLAKLLGLTEAEVRRRRHALAIRPVYKRVDSCAAEFASSTA 541

Query: 627  YMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSN 686
            Y+YS+Y+ ECE+ PTQ+KK+++LGGGPNRIGQGIEFDYCC H + +++  GYE+I++N N
Sbjct: 542  YLYSTYEEECEAKPTQRKKIIVLGGGPNRIGQGIEFDYCCVHAALAMREDGYESIIVNCN 601

Query: 687  PETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHR 746
            PETVSTDYDTSDRLYFEPLT+EDVL +++ E+P G+IVQ+GGQTPLKL+    + L+ + 
Sbjct: 602  PETVSTDYDTSDRLYFEPLTLEDVLEIVEKEQPSGVIVQYGGQTPLKLA----RALEAYG 657

Query: 747  LPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEIG 806
             P         I GTSP+SID AEDRERF  +I +L ++QP    A +   AL +A++IG
Sbjct: 658  AP---------IIGTSPESIDLAEDRERFQHLISQLGLQQPPNRSAVAVEQALDLARQIG 708

Query: 807  YPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALAD 866
            YP+VVRPSYVLGGRAMEIVY D  L+ Y+  AV+V PE PVL+D++L DA+E+DVDA+ D
Sbjct: 709  YPLVVRPSYVLGGRAMEIVYEDADLLQYMREAVKVSPEAPVLLDRFLDDAVEVDVDAVCD 768

Query: 867  SCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNC 926
               +V+IGGIMEHIEQAGVHSGDSAC +P  T+S++  + +      LA +L V GLMN 
Sbjct: 769  G-HDVLIGGIMEHIEQAGVHSGDSACSLPAYTLSATIGERLREQVRLLAIKLGVIGLMNT 827

Query: 927  QYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPKH 986
            Q+AI    ++YLLE NPRASRTVPFV+KA G  LAK AA  M+G+SL + G T+EVIP +
Sbjct: 828  QFAIKDD-EIYLLEVNPRASRTVPFVAKATGLALAKIAARCMAGRSLAEQGCTQEVIPAY 886

Query: 987  VSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVFL 1046
             SVKEAV PF KF G D +LGPEM+STGEVMGI  SF  A+AK+Q AAG +LP  G  F+
Sbjct: 887  YSVKEAVFPFVKFPGVDPILGPEMKSTGEVMGIGRSFGEAYAKSQSAAGVELPRRGRAFV 946

Query: 1047 SLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVAN 1106
            S+ D  KP +  +A+  +  GF +++T GT   L   GI  E + K+ EGRPH  D + N
Sbjct: 947  SVRDTDKPSIIAVARELVQRGFSLLATGGTGRALHAAGIDCELINKVAEGRPHIVDAIKN 1006

Query: 1107 GQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTVTMTA 1166
              + +++ T+ G      D   +RR  L  KV   TT++GA A   A+  L S  V   +
Sbjct: 1007 DSVDLIINTTEGRQAIA-DSFSIRREALQGKVCYTTTIAGARATVLALDYLDSGAV--IS 1063

Query: 1167 LQDFFDVETA 1176
            LQ+ +   TA
Sbjct: 1064 LQELYREATA 1073


>gi|416184801|ref|ZP_11613118.1| carbamoyl-phosphate synthase, large subunit [Neisseria meningitidis
            M13399]
 gi|325133501|gb|EGC56164.1| carbamoyl-phosphate synthase, large subunit [Neisseria meningitidis
            M13399]
          Length = 1071

 Score = 1249 bits (3232), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 622/1070 (58%), Positives = 795/1070 (74%), Gaps = 22/1070 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTDL+ ILI+GAGPIVIGQACEFDYSG QACKAL+EEGY+VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDLKSILIIGAGPIVIGQACEFDYSGAQACKALREEGYKVILVNSNPATIMTDPEMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  + VE+++ KERPDA+LPTMGGQTALN A+ LA +G L KY VELIGA  DA
Sbjct: 63   VTYIEPIMWQTVEKIIAKERPDAILPTMGGQTALNCALDLARNGVLAKYNVELIGATEDA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  FK+AM+ IG+  P S + +T++E ++   ++G FP +IRP+FT+GG+GGGI
Sbjct: 123  IDKAEDRGRFKEAMEKIGLSCPKSFVCHTMNEALAAQEQVG-FPTLIRPSFTMGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYNK+EF AIC+ G  AS T ++L+E+S+LGWKEYE+EV+RD  DN +IICSIEN DPMG
Sbjct: 182  AYNKDEFLAICERGFDASPTHELLIEQSVLGWKEYEMEVVRDKNDNCIIICSIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGV+ GGSNVQFAVNP +GE++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQIMRNASLAVLREIGVDTGGSNVQFAVNPENGEMIVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VG++LD++ NDIT  +TPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGFTLDELRNDITGGRTPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            FAFEKFP ++  LTTQMKSVGE MA+GRT QESFQKALR LE G  G+   +      D 
Sbjct: 362  FAFEKFPAADDRLTTQMKSVGEVMAMGRTIQESFQKALRGLETGLCGFNPRS-----SDK 416

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
             +++  L  P P+RM  +  A + G  ++EIHE+  ID WFL Q ++L+  E+ +    +
Sbjct: 417  AEIRRELANPGPERMLFVADACRAGFTLEEIHEICAIDPWFLAQIEDLMKEEKAVSDGIL 476

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
            S++       +KR+GFSDK++A     +EKEVRE R +L + P YKRVDTCAAEF   T 
Sbjct: 477  SDLDFAALRRLKRKGFSDKRLAQLLNVSEKEVREHRYALKLHPVYKRVDTCAAEFATETA 536

Query: 627  YMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSN 686
            Y+YS+Y+ ECE+ P+ +KKV+ILGGGPNRIGQGIEFDYCC H + +L+ +G+ETIM+N N
Sbjct: 537  YLYSTYEEECEARPSDRKKVMILGGGPNRIGQGIEFDYCCVHAALALRESGFETIMVNCN 596

Query: 687  PETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHR 746
            PETVSTD+DTSDRLYFEPLT+EDVL ++  E P G+IV +GGQTPLKL+           
Sbjct: 597  PETVSTDFDTSDRLYFEPLTLEDVLEIVRTENPWGVIVHYGGQTPLKLA----------- 645

Query: 747  LPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEIG 806
              +A  +  V I GTS DSIDAAEDRERF  ++ +L + QP   IA +E +AL  A+EIG
Sbjct: 646  --NALVENGVNIIGTSADSIDAAEDRERFQKVLNDLGLRQPPNRIAHNEEEALVKAEEIG 703

Query: 807  YPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALAD 866
            YP+VVRPSYVLGGRAM+IV++ E L  Y+  AV+V  + PVL+D +L++AIE+DVD ++D
Sbjct: 704  YPLVVRPSYVLGGRAMQIVHSAEALQKYMREAVQVSEDSPVLLDFFLNNAIEVDVDCVSD 763

Query: 867  SCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNC 926
               +VVIGGIM+H+EQAG+HSGDS C +P  ++S    D I   T  +A  L V GLMN 
Sbjct: 764  G-KDVVIGGIMQHVEQAGIHSGDSGCSLPPYSLSEEIQDEIRRQTKAMAYALGVVGLMNV 822

Query: 927  QYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPKH 986
            Q+A+   G V++LE NPRASRTVPFVSKA G PLAK  A  M+G SL + G  KEV+P  
Sbjct: 823  QFAV-QDGVVFVLEVNPRASRTVPFVSKATGVPLAKVGARCMAGISLKEQGVEKEVVPDF 881

Query: 987  VSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVFL 1046
             +VKEAV PF KF G D +LGPEMRSTGEVMG+  SF  A+ KAQ+ AG++L  +G +FL
Sbjct: 882  YAVKEAVFPFIKFPGVDTILGPEMRSTGEVMGVGASFGEAYYKAQLGAGERLNPTGKIFL 941

Query: 1047 SLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVAN 1106
            S+ +  K  + + AK F  +G+ I +T GTA +L   G+ V+ + K+ EGRPH GD + N
Sbjct: 942  SVREEDKERVIKTAKNFQALGYGICATRGTAQYLTEHGLIVQTINKVPEGRPHIGDALKN 1001

Query: 1107 GQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRS 1156
            G+I ++V T S D     D   +R+  L  +VP  TT +G  A +E  +S
Sbjct: 1002 GEIALVVNTVSSDPQSVSDSHIIRQSALQQRVPQYTTTAGGEAMSEGAKS 1051


>gi|253826206|gb|ACT36390.1| carbamoyl phosphate synthase large subunit [uncultured bacterium
            L11E10]
          Length = 1080

 Score = 1249 bits (3232), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 623/1068 (58%), Positives = 796/1068 (74%), Gaps = 21/1068 (1%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            +RTD+  ILI+GAGPIVIGQACEFDYSG QACKAL+EEGY V+L+NSNPATIMTDP +AD
Sbjct: 3    RRTDINTILIIGAGPIVIGQACEFDYSGAQACKALREEGYRVVLVNSNPATIMTDPEMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
              YI P+  + VE+++ KERPDALLPTMGGQTALN A+ LA+ G L+KY VELIGA+ +A
Sbjct: 63   AVYIEPINWQTVEKIIAKERPDALLPTMGGQTALNCALDLADHGVLDKYNVELIGARREA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I  AEDR+LF+ AM  IG++ P + +  + ++ + I   +G +P IIRP+FTLGG+GGGI
Sbjct: 123  IMMAEDRELFRVAMAEIGLECPKAAVARSFEQAVEIQATVG-YPTIIRPSFTLGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEFE I K GL  S   +VLVE+S+LGWKE+E+EV+RD ADN +I+CSIEN+DPMG
Sbjct: 182  AYNREEFEDIIKRGLELSPVHEVLVEESVLGWKEFEMEVVRDTADNCIIVCSIENLDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQRLRD SIA++R+IGV+ GGSNVQF +N   G V+VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQRLRDASIAVLRKIGVDTGGSNVQFGINAQTGRVVVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ N+IT  KTPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGYTLDELKNEITGGKTPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVK-ELDWD 505
            FAFEKFP ++  LTTQMKSVGE MA+GRTF ES QKALR LE G  G   + +    + D
Sbjct: 362  FAFEKFPQADARLTTQMKSVGEVMAMGRTFSESLQKALRGLETGKVGLDPTGLDLTSEDD 421

Query: 506  WEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQS 565
               L+  L+ P P+R+  +  A + GM+V+E+H LSFID WFL Q ++LI  E  +  + 
Sbjct: 422  MASLRRELKAPGPERLFYVGDAFRAGMRVEEVHALSFIDPWFLDQIEDLITDEARVAAEG 481

Query: 566  VSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANT 625
            + ++      ++KR GFSD ++A  T + E  VR  R +LGV P YKRVD+ AAEF  +T
Sbjct: 482  LGSLDAARMRKLKRAGFSDARLAQLTATDETAVRVLRKALGVRPVYKRVDSSAAEFATDT 541

Query: 626  PYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNS 685
             Y+YS+Y+ ECE+ PT + K++ILGGGPNRIGQGIEFDYCC H + +L++ GYETIM+N 
Sbjct: 542  AYLYSTYEDECEANPTNRDKIMILGGGPNRIGQGIEFDYCCVHAALALRADGYETIMVNC 601

Query: 686  NPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEH 745
            NPETVSTDYDTSDRLYFEPLT+EDVL +++LE+P+G+IVQ+GGQTPLKL+          
Sbjct: 602  NPETVSTDYDTSDRLYFEPLTLEDVLAIVELEKPKGVIVQYGGQTPLKLA---------- 651

Query: 746  RLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEI 805
            R   A+G   V + GTSPDSID AEDRERF  ++  L ++QP   IA+++  AL +A+EI
Sbjct: 652  RALEANG---VPVIGTSPDSIDLAEDRERFQGLVDRLGLKQPPNRIARNDQQALLLAREI 708

Query: 806  GYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALA 865
            GYP+VVRPSYVLGGRAMEIVY +  L  Y+ +AV+V  + PVL+D++L +A+E+DVD +A
Sbjct: 709  GYPLVVRPSYVLGGRAMEIVYGESDLARYVRDAVKVSNDSPVLLDRFLDNAVEVDVDIIA 768

Query: 866  DSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMN 925
            D  G V+IGG+MEHIE+AGVHSGDS+C +P  ++S+     +    ++LA+ LNV GLMN
Sbjct: 769  DKDGQVLIGGVMEHIEEAGVHSGDSSCSLPPYSLSAQTQAELRRQVVELARALNVVGLMN 828

Query: 926  CQYAITTSGD----VYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKE 981
             Q+AI    D    VYLLE NPRASRTVPFVSKA G  LAK AA  M+GK+L + G T+E
Sbjct: 829  TQFAIQAGDDGQDIVYLLEVNPRASRTVPFVSKATGMALAKIAARCMAGKTLAEQGATRE 888

Query: 982  VIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLS 1041
            ++P + SVKEA+ PF KFQG D +LGPEMRSTGEVMG+  SF  A A+AQ AAG K P  
Sbjct: 889  IVPDYYSVKEAIFPFAKFQGVDPILGPEMRSTGEVMGVGHSFAAAMARAQEAAGIKAPQP 948

Query: 1042 GTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAG 1101
            G  F+S+ D  K  +  +A+A L+ GF +V+T GTA +L   GI  E V K+ +GRPH  
Sbjct: 949  GKAFVSVRDPDKQRVLPVARALLERGFTLVATVGTAAWLRKHGIECELVNKVTDGRPHIV 1008

Query: 1102 DMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALA 1149
            D++ NG+I  +V T+ G      D   +RR  L  ++   TT++GA A
Sbjct: 1009 DLIKNGEIVYIVNTTEGRRAIS-DSFSIRREALQQRLTYSTTIAGARA 1055



 Score =  237 bits (604), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 152/424 (35%), Positives = 230/424 (54%), Gaps = 24/424 (5%)

Query: 61  VRASSAKIDSSA-ELSNGAA----SSKDQKLGKRTDLRKILILGAGPIVIGQACEFDYSG 115
           VR    ++DSSA E +   A    + +D+     T+  KI+ILG GP  IGQ  EFDY  
Sbjct: 523 VRPVYKRVDSSAAEFATDTAYLYSTYEDECEANPTNRDKIMILGGGPNRIGQGIEFDYCC 582

Query: 116 TQACKALKEEGYEVILINSNPATIMTDPGLADRTYITPMTPELVEQVLEKERPDALLPTM 175
             A  AL+ +GYE I++N NP T+ TD   +DR Y  P+T E V  ++E E+P  ++   
Sbjct: 583 VHAALALRADGYETIMVNCNPETVSTDYDTSDRLYFEPLTLEDVLAIVELEKPKGVIVQY 642

Query: 176 GGQTALNLAVALAESGALEKYGVELIGAKLDAIKKAEDRDLFKQAMKTIGVKTPPSGIGN 235
           GGQT L LA       ALE  GV +IG   D+I  AEDR+ F+  +  +G+K PP+ I  
Sbjct: 643 GGQTPLKLA------RALEANGVPVIGTSPDSIDLAEDRERFQGLVDRLGLKQPPNRIAR 696

Query: 236 TLDECISIANEIGEFPLIIRPAFTLGGTGGGIAYNKEEFEAICKAGLAASLTSQVLVEKS 295
              + + +A EIG +PL++RP++ LGG    I Y + +     +  +  S  S VL+++ 
Sbjct: 697 NDQQALLLAREIG-YPLVVRPSYVLGGRAMEIVYGESDLARYVRDAVKVSNDSPVLLDRF 755

Query: 296 LLGWKEYELEVMRDLADNVVIICSIENVDPMGVHTGDSITVAPAQTLTDKEYQRLRDYSI 355
           L    E +++++ D    V+I   +E+++  GVH+GDS    P  +L+ +    LR   +
Sbjct: 756 LDNAVEVDVDIIADKDGQVLIGGVMEHIEEAGVHSGDSSCSLPPYSLSAQTQAELRRQVV 815

Query: 356 AIIREIGVECGGSNVQFAVNPV-DGE--VMVIEMNPRVSRSSALASKATGFPIAKMAAKL 412
            + R + V  G  N QFA+    DG+  V ++E+NPR SR+    SKATG  +AK+AA+ 
Sbjct: 816 ELARALNV-VGLMNTQFAIQAGDDGQDIVYLLEVNPRASRTVPFVSKATGMALAKIAARC 874

Query: 413 SVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRFAFEKFPGSEPLLTTQMKSVGEAMAL 472
             G +L         +  A+ E   DY   K   F F KF G +P+L  +M+S GE M +
Sbjct: 875 MAGKTL--------AEQGATREIVPDYYSVKEAIFPFAKFQGVDPILGPEMRSTGEVMGV 926

Query: 473 GRTF 476
           G +F
Sbjct: 927 GHSF 930


>gi|222110656|ref|YP_002552920.1| carbamoyl-phosphate synthase large subunit [Acidovorax ebreus TPSY]
 gi|221730100|gb|ACM32920.1| carbamoyl-phosphate synthase, large subunit [Acidovorax ebreus TPSY]
          Length = 1083

 Score = 1249 bits (3232), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 641/1083 (59%), Positives = 802/1083 (74%), Gaps = 30/1083 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILI+GAGPI+IGQACEFDYSG QACKAL+EEGY+VILINSNPATIMTDP  AD
Sbjct: 3    KRTDIKSILIIGAGPIIIGQACEFDYSGVQACKALREEGYKVILINSNPATIMTDPATAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+T + VE+++ KERPDA+LPTMGGQTALN A+ L  +G L KY VELIGA  +A
Sbjct: 63   VTYIEPITWQTVEKIIAKERPDAILPTMGGQTALNCALDLWRNGVLHKYKVELIGATPEA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  FK AM  IG+ +  SGI +++DE  ++   +G FP +IRP+FTLGGTGGGI
Sbjct: 123  IDKAEDRLKFKDAMTRIGLGSARSGIAHSMDEAWAVQKNVG-FPTVIRPSFTLGGTGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN EEFE ICK GL AS T+++L+E+SLLGWKEYE+EV+RD ADN +I+CSIEN+DPMG
Sbjct: 182  AYNPEEFETICKRGLEASPTNELLIEESLLGWKEYEMEVVRDKADNCIIVCSIENLDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGV+ GGSNVQF+VNP DG ++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQIMRNASLAVLREIGVDTGGSNVQFSVNPKDGRMIVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ N+IT   TPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGYTLDELKNEITGGATPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            FAFEKFP ++  LTTQMKSVGE MA+GRTFQESFQKALR LE G  G     + E   D 
Sbjct: 362  FAFEKFPAADSRLTTQMKSVGEVMAMGRTFQESFQKALRGLEVGVDG-----MNEKTQDR 416

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFL--LTQ 564
            E L+  L  P P+R+  +  A   G+ VDE+H+L+ IDKWFL Q +E++ +E  L  LT 
Sbjct: 417  ELLEKELGEPGPERIWYVGDAFAMGLSVDEVHDLTKIDKWFLVQIEEIVKIELDLDQLTA 476

Query: 565  -----SVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAA 619
                 +++++  D    +K++GFSD+++A   K+ EK VRE R +L V P YKRVDTCAA
Sbjct: 477  EKGDGALASLDTDTLRALKKKGFSDRRLAKLLKTNEKAVREARHALNVRPVYKRVDTCAA 536

Query: 620  EFEANTPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYE 679
            EF  NT YMYS+Y+ ECE+ PT KKK+++LGGGPNRIGQGIEFDYCC H + +++  GYE
Sbjct: 537  EFATNTAYMYSTYEDECEAEPTNKKKIMVLGGGPNRIGQGIEFDYCCVHAALAMREDGYE 596

Query: 680  TIMMNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIH 739
            TIM+N NPETVSTDYDTSDRLYFEPLT+EDVL ++D E+PEG+IVQ+GGQTPLKL+L + 
Sbjct: 597  TIMVNCNPETVSTDYDTSDRLYFEPLTLEDVLEIVDKEKPEGVIVQYGGQTPLKLALGLE 656

Query: 740  QYLDEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADAL 799
                      A+G   V I GT+PD IDAAEDRERF  ++ +L + QP    A++E +AL
Sbjct: 657  ----------AAG---VPIIGTTPDMIDAAEDRERFQKLLGDLGLRQPPNATARTEPEAL 703

Query: 800  AIAKEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEI 859
              A  +GYP+VVRPSYVLGGRAMEIV+    L  Y+  AV+V  + PVL+D++LS+AIE 
Sbjct: 704  EKAAALGYPLVVRPSYVLGGRAMEIVHEQRDLERYMREAVKVSNDSPVLLDRFLSNAIEC 763

Query: 860  DVDALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLN 919
            DVD + D+ G V IGG+MEHIEQAGVHSGDSAC +P   + +  +  I   T  +A  LN
Sbjct: 764  DVDCVRDASGAVFIGGVMEHIEQAGVHSGDSACSLPPYYLKAETVAEIKRQTTAMAHGLN 823

Query: 920  VCGLMNCQYAI--TTSGDV-YLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDL 976
            V GLMN Q+AI  T  GDV Y+LE NPRASRTVPFVSKA G  LAK AA  M+G++L   
Sbjct: 824  VVGLMNVQFAIQETDDGDVIYVLEVNPRASRTVPFVSKATGVQLAKVAARCMAGQTLASQ 883

Query: 977  GFTKEVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQ 1036
            G TKEV P + SVKEAV PF KF G D +LGPEM+STGEVMG+  +F  AF K+Q+ AG 
Sbjct: 884  GITKEVTPPYFSVKEAVFPFVKFPGVDTILGPEMKSTGEVMGVGKTFGEAFVKSQLGAGT 943

Query: 1037 KLPLSGTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEG 1096
            +LP SG VFL++ +  K     IA+    +GF++++T GTA  +E  G+ V+ V K+ EG
Sbjct: 944  RLPRSGKVFLTVKNADKQRAVAIARDLAAMGFELLATKGTAAAIEAAGVPVQVVNKVTEG 1003

Query: 1097 RPHAGDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRS 1156
            RPH  DM+ N +I M++ T         D   +R   L  +V   TT+ GA A  E ++ 
Sbjct: 1004 RPHIVDMIKNDEIAMVINTVEERRNAIADSRAIRTSSLLARVTTFTTIFGAEAAVEGMKH 1063

Query: 1157 LKS 1159
            L +
Sbjct: 1064 LDN 1066



 Score =  246 bits (629), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 155/431 (35%), Positives = 244/431 (56%), Gaps = 25/431 (5%)

Query: 61  VRASSAKIDS-SAELSNGAA----SSKDQKLGKRTDLRKILILGAGPIVIGQACEFDYSG 115
           VR    ++D+ +AE +   A    + +D+   + T+ +KI++LG GP  IGQ  EFDY  
Sbjct: 524 VRPVYKRVDTCAAEFATNTAYMYSTYEDECEAEPTNKKKIMVLGGGPNRIGQGIEFDYCC 583

Query: 116 TQACKALKEEGYEVILINSNPATIMTDPGLADRTYITPMTPELVEQVLEKERPDALLPTM 175
             A  A++E+GYE I++N NP T+ TD   +DR Y  P+T E V ++++KE+P+ ++   
Sbjct: 584 VHAALAMREDGYETIMVNCNPETVSTDYDTSDRLYFEPLTLEDVLEIVDKEKPEGVIVQY 643

Query: 176 GGQTALNLAVALAESGALEKYGVELIGAKLDAIKKAEDRDLFKQAMKTIGVKTPPSGIGN 235
           GGQT L LA+       LE  GV +IG   D I  AEDR+ F++ +  +G++ PP+    
Sbjct: 644 GGQTPLKLAL------GLEAAGVPIIGTTPDMIDAAEDRERFQKLLGDLGLRQPPNATAR 697

Query: 236 TLDECISIANEIGEFPLIIRPAFTLGGTGGGIAYNKEEFEAICKAGLAASLTSQVLVEKS 295
           T  E +  A  +G +PL++RP++ LGG    I + + + E   +  +  S  S VL+++ 
Sbjct: 698 TEPEALEKAAALG-YPLVVRPSYVLGGRAMEIVHEQRDLERYMREAVKVSNDSPVLLDRF 756

Query: 296 LLGWKEYELEVMRDLADNVVIICSIENVDPMGVHTGDSITVAPAQTLTDKEYQRLRDYSI 355
           L    E +++ +RD +  V I   +E+++  GVH+GDS    P   L  +    ++  + 
Sbjct: 757 LSNAIECDVDCVRDASGAVFIGGVMEHIEQAGVHSGDSACSLPPYYLKAETVAEIKRQTT 816

Query: 356 AIIREIGVECGGSNVQFAVNPV-DGEVM-VIEMNPRVSRSSALASKATGFPIAKMAAKLS 413
           A+   + V  G  NVQFA+    DG+V+ V+E+NPR SR+    SKATG  +AK+AA+  
Sbjct: 817 AMAHGLNV-VGLMNVQFAIQETDDGDVIYVLEVNPRASRTVPFVSKATGVQLAKVAARCM 875

Query: 414 VGYSLDQIPNDITKK-TPASFEPSIDYVVTKIPRFAFEKFPGSEPLLTTQMKSVGEAMAL 472
            G +L      ITK+ TP  F  S+   V     F F KFPG + +L  +MKS GE M +
Sbjct: 876 AGQTLAS--QGITKEVTPPYF--SVKEAV-----FPFVKFPGVDTILGPEMKSTGEVMGV 926

Query: 473 GRTFQESFQKA 483
           G+TF E+F K+
Sbjct: 927 GKTFGEAFVKS 937


>gi|148259922|ref|YP_001234049.1| carbamoyl phosphate synthase large subunit [Acidiphilium cryptum
            JF-5]
 gi|326403124|ref|YP_004283205.1| carbamoyl-phosphate synthase large subunit [Acidiphilium multivorum
            AIU301]
 gi|146401603|gb|ABQ30130.1| carbamoyl-phosphate synthase large subunit [Acidiphilium cryptum
            JF-5]
 gi|325049985|dbj|BAJ80323.1| carbamoyl-phosphate synthase large subunit [Acidiphilium multivorum
            AIU301]
          Length = 1081

 Score = 1249 bits (3232), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 623/1093 (56%), Positives = 814/1093 (74%), Gaps = 28/1093 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILI+GAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP LAD
Sbjct: 3    KRTDIKSILIIGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPELAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+TPE+VE+++ KERPDA+LPTMGGQTALN A+ALA++G LEK+GVELIGA+ + 
Sbjct: 63   ATYIEPITPEMVEKIIIKERPDAVLPTMGGQTALNTAMALAKAGTLEKHGVELIGARAEV 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I +AEDR  F+ AM  IG+++P S I +T+DE  +  + +G  P +IRP+FTLGGTGGGI
Sbjct: 123  IDRAEDRLKFRDAMAEIGIESPRSAIAHTMDEARAALDLVG-LPAVIRPSFTLGGTGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEF  I   GL AS T++VL+E+S+LGWKEYE+EV+RD ADN +I+CSIEN+DPMG
Sbjct: 182  AYNREEFLEIVAGGLDASPTTEVLIEESVLGWKEYEMEVVRDQADNCIIVCSIENIDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDS+TVAPA TLTD+EYQ +RD SIA +R+IGV+ GGSNVQF +NP DG +++IEMN
Sbjct: 242  VHTGDSVTVAPALTLTDREYQLMRDASIACLRKIGVDTGGSNVQFGINPADGRMVIIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRF 447
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT+ TPASFEP+IDYVV KIPRF
Sbjct: 302  PRVSRSSALASKATGFPIAKIAAKLAVGYTLDELRNDITRVTPASFEPTIDYVVIKIPRF 361

Query: 448  AFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDWE 507
             FEKFPG+  LLTT MKSVGEAMA+GR+F E+ QK LRSLE G +G      K  D   +
Sbjct: 362  TFEKFPGTPALLTTSMKSVGEAMAIGRSFPEALQKGLRSLETGLAGLDPVE-KPGDGTRD 420

Query: 508  QLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSVS 567
              + +L  P PDR+     A++ G+ V+EIH     D WFL Q +++++ E+ +  + + 
Sbjct: 421  AFRAALSTPRPDRLLIAAEALRAGLSVEEIHAACKFDPWFLRQMEDIVEAERRVAAEGLP 480

Query: 568  NMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTPY 627
               +     +K  GFSD+++A  T  +E +V + RL+LGV P Y+R+D+   EF + T Y
Sbjct: 481  G-DELGMRALKALGFSDRRLAALTGRSEADVSKARLALGVTPVYRRIDSTGGEFASATSY 539

Query: 628  MYSSYDFE-----CESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIM 682
            M+++Y+       CE+ P++++KV+ILGGGPNRIGQGIEFDYCC H +++L+ AG+ETIM
Sbjct: 540  MFATYEGGFGAPVCEAEPSERRKVVILGGGPNRIGQGIEFDYCCVHAAYALREAGFETIM 599

Query: 683  MNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGI----IVQFGGQTPLKLSLPI 738
            +N NPETVSTDYDTSDRLYFEPL  EDVL+++  E+  G     IVQ+GGQTPLKLS   
Sbjct: 600  VNCNPETVSTDYDTSDRLYFEPLFAEDVLSLLRREQERGTLLGCIVQYGGQTPLKLS--- 656

Query: 739  HQYLDEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADA 798
             Q L E  +P         I GTS D+IDAAEDRERF+ +++ L + QP+ G+A+S   A
Sbjct: 657  -QALAEAGIP---------ILGTSADAIDAAEDRERFHDLLRSLGLRQPENGLARSAEQA 706

Query: 799  LAIAKEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIE 858
             AI + IG+PVV+RPSYVLGGRAMEIVY   +L  Y+  AV V    PVLID+YL+DAIE
Sbjct: 707  EAIVERIGFPVVIRPSYVLGGRAMEIVYDLASLRRYMREAVVVSGTNPVLIDRYLNDAIE 766

Query: 859  IDVDALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRL 918
            +DVD +AD   +V + G+MEHIE+AG+HSGDSAC +P  ++S + +  + + T  +AK L
Sbjct: 767  VDVDCIADG-QSVYVAGVMEHIEEAGIHSGDSACSLPPYSLSPAIVAELRAETEAMAKAL 825

Query: 919  NVCGLMNCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGF 978
            NV GLMN Q+AI    +VY+LE NPRASRTVPFV+KA G P+AK  A VM+G++L   G 
Sbjct: 826  NVIGLMNVQFAIQGE-NVYVLEVNPRASRTVPFVAKATGVPVAKIGARVMAGEALASFGL 884

Query: 979  TKEVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKL 1038
               V+  HV+VKEAV PF +F G DVLLGPEM+STGEVMG+D+SF  AFAKAQ+ AG KL
Sbjct: 885  DDSVMRSHVAVKEAVFPFARFSGVDVLLGPEMKSTGEVMGLDVSFARAFAKAQLGAGVKL 944

Query: 1039 PLSGTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRP 1098
            P +GTVFLS+ D  KP +  IA+ F+D+GF+I++T GTA  L   GIA   V K+ EGRP
Sbjct: 945  PQAGTVFLSVRDSDKPAILAIARRFVDLGFEIMATRGTAAHLSEAGIAARAVNKVLEGRP 1004

Query: 1099 HAGDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLK 1158
            H  D + +G++Q+++ T+SG +    D   +RR+ L + VP  TT++GA A + AI +L 
Sbjct: 1005 HCVDSIRSGEVQLVINTASG-AQTVADSFDIRRQALNHGVPHYTTIAGARAASHAIAALA 1063

Query: 1159 SNTVTMTALQDFF 1171
            + ++ +  LQ +F
Sbjct: 1064 AGSLEVAPLQSYF 1076


>gi|161378120|ref|NP_746831.2| carbamoyl phosphate synthase large subunit [Pseudomonas putida
            KT2440]
 gi|38257481|sp|Q88DU6.2|CARB_PSEPK RecName: Full=Carbamoyl-phosphate synthase large chain; AltName:
            Full=Carbamoyl-phosphate synthetase ammonia chain
          Length = 1073

 Score = 1249 bits (3231), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 629/1089 (57%), Positives = 799/1089 (73%), Gaps = 30/1089 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILILGAGPIVIGQACEFDYSG QACKAL+EEG+ VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGFRVILVNSNPATIMTDPAMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  + V +++EKERPDA+LPTMGGQTALN A+ L   G LEK+GVE+IGA  D 
Sbjct: 63   ATYIEPIKWQSVAKIIEKERPDAVLPTMGGQTALNCALDLERHGVLEKFGVEMIGANADT 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  F +AMK IG++ P SGI ++++E  ++  ++G FP IIRP+FT+GGTGGGI
Sbjct: 123  IDKAEDRSRFDKAMKDIGLECPRSGIAHSMEEANAVLEKLG-FPCIIRPSFTMGGTGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEFE IC  GL  S T ++L+++SL+GWKEYE+EV+RD  DN +I+CSIEN DPMG
Sbjct: 182  AYNREEFEEICTRGLDLSPTKELLIDESLIGWKEYEMEVVRDKKDNCIIVCSIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGVE GGSNVQF + P  G ++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQIMRNASLAVLREIGVETGGSNVQFGICPNTGRMVVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL++GY+LD++ NDIT  +TPASFEPSIDYVVTK+PR
Sbjct: 302  PRVSRSSALASKATGFPIAKIAAKLAIGYTLDELQNDITGGRTPASFEPSIDYVVTKLPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            FAFEKFP ++  LTTQMKSVGE MA+GRTFQES QKALR LE G     C    ++D   
Sbjct: 362  FAFEKFPKADARLTTQMKSVGEVMAIGRTFQESLQKALRGLEVG----ACGLDPKVDLAS 417

Query: 507  EQ----LKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLL 562
             +    LK  L VP  +R+  +  AM+ GM  +EI  L+ ID WFL Q ++LI  E+ + 
Sbjct: 418  PEAASILKRELTVPGAERIWYVADAMRSGMTCEEIFNLTGIDMWFLVQMEDLIKEEEKVK 477

Query: 563  TQSVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFE 622
            T ++S + KD    +KR+GFSD+++A     T+K +R  R  L V P YKRVDTCAAEF 
Sbjct: 478  TLALSAIDKDYMLRLKRKGFSDQRLAVLLGITDKNLRRHRHKLEVFPVYKRVDTCAAEFA 537

Query: 623  ANTPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIM 682
             +T Y+YS+Y+ ECE+ P+ + K++ILGGGPNRIGQGIEFDYCC H + +L+  GYETIM
Sbjct: 538  TDTAYLYSTYEEECEANPSTRDKIMILGGGPNRIGQGIEFDYCCVHAALALREDGYETIM 597

Query: 683  MNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYL 742
            +N NPETVSTDYDTSDRLYFEPLT+EDVL V  +E+P+G+IV +GGQTPLKL+    + L
Sbjct: 598  VNCNPETVSTDYDTSDRLYFEPLTLEDVLEVCRVEKPKGVIVHYGGQTPLKLA----RAL 653

Query: 743  DEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIA 802
            +E  +P         I GTSPD+ID AEDRERF  +++ LS+ QP     +SE +A+  A
Sbjct: 654  EEAGVP---------IIGTSPDAIDRAEDRERFQQMVQRLSLLQPPNATVRSEEEAIRAA 704

Query: 803  KEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVD 862
              IGYP+VVRPSYVLGGRAMEIVY  + L  YL  AV+V  + PVL+D +L+ AIE+DVD
Sbjct: 705  GSIGYPLVVRPSYVLGGRAMEIVYELDELKRYLREAVQVSNDSPVLLDHFLNCAIEMDVD 764

Query: 863  ALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCG 922
            A+ D   +VVIG IM+HIEQAGVHSGDSAC +P  ++S    D +     K+A  L V G
Sbjct: 765  AVCDGT-DVVIGAIMQHIEQAGVHSGDSACSLPPYSLSKEVQDEVRVQVKKMALELGVVG 823

Query: 923  LMNCQYAITTSGD-VYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKE 981
            LMN Q A+   GD +Y++E NPRASRTVPFVSK IG  LA  AA VM+GK+L +LGFT+E
Sbjct: 824  LMNVQLAL--QGDKIYVIEVNPRASRTVPFVSKCIGTSLAMIAARVMAGKTLKELGFTQE 881

Query: 982  VIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLS 1041
            +IP   SVKEAV PF KF G D +LGPEM+STGEVMG+  SF  AFAKAQ+ A + LP  
Sbjct: 882  IIPNFYSVKEAVFPFAKFPGVDPILGPEMKSTGEVMGVGDSFGEAFAKAQMGASEVLPTG 941

Query: 1042 GTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAG 1101
            GT F+S+ D  KP +  +A+  + +GF++V+T+GTA  +E  G+ V RV K+ EGRPH  
Sbjct: 942  GTAFISVRDDDKPQVAGVARDLIALGFEVVATAGTAKVIEAAGLKVRRVNKVTEGRPHVV 1001

Query: 1102 DMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNT 1161
            DM+ N ++ +++ T+ G      D   +RR  L +K+   TT++   A  EA++     T
Sbjct: 1002 DMIKNDEVSLIINTTEGRQ-SIADSYSIRRNALQHKIYCTTTIAAGEAICEALKFGPEKT 1060

Query: 1162 VTMTALQDF 1170
            V    LQD 
Sbjct: 1061 VRR--LQDL 1067


>gi|385851945|ref|YP_005898460.1| carbamoyl-phosphate synthase large subunit [Neisseria meningitidis
            M04-240196]
 gi|325206768|gb|ADZ02221.1| carbamoyl-phosphate synthase, large subunit [Neisseria meningitidis
            M04-240196]
          Length = 1071

 Score = 1249 bits (3231), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 623/1070 (58%), Positives = 793/1070 (74%), Gaps = 22/1070 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTDL+ ILI+GAGPIVIGQACEFDYSG QACKAL+EEGY+VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDLKSILIIGAGPIVIGQACEFDYSGAQACKALREEGYKVILVNSNPATIMTDPEMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  + VE+++ KERPDA+LPTMGGQTALN A+ LA +G L KY VELIGA  DA
Sbjct: 63   VTYIEPIMWQTVEKIIAKERPDAILPTMGGQTALNCALDLARNGVLAKYNVELIGATEDA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  FK+AM+ IG+  P S + +T++E ++   ++G FP +IRP+FT+GG+GGGI
Sbjct: 123  IDKAEDRGRFKEAMEKIGLSCPKSFVCHTMNEALAAQEQVG-FPTLIRPSFTMGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYNK+EF AIC+ G  AS T ++L+E+S+LGWKEYE+EV+RD  DN +IICSIEN DPMG
Sbjct: 182  AYNKDEFLAICERGFDASPTHELLIEQSVLGWKEYEMEVVRDKNDNCIIICSIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGV  GGSNVQFAVNP +GE++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQIMRNASLAVLREIGVNTGGSNVQFAVNPENGEMIVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VG++LD++ NDIT  KTPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGFTLDELRNDITGGKTPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            FAFEKFP ++  LTTQMKSVGE MA+GRT QESFQKALR LE G  G+   +      D 
Sbjct: 362  FAFEKFPAADDRLTTQMKSVGEVMAMGRTIQESFQKALRGLETGLCGFNPRS-----SDK 416

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
             +++  L  P P+RM  +  A + G  ++EIHE+  ID WFL Q ++L+  E+ +    +
Sbjct: 417  AEIRRELANPGPERMLFVADAFRAGFTLEEIHEICAIDPWFLAQIEDLMKEEKAVSDGIL 476

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
            S++       +KR+GFSDK++A     +EKEVRE R +L + P YKRVDTCAAEF   T 
Sbjct: 477  SDLDFAALRRLKRKGFSDKRLAQLLNVSEKEVREHRYALKLHPVYKRVDTCAAEFATETA 536

Query: 627  YMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSN 686
            Y+YS+Y+ ECES P+ +KKV+ILG GPNRIGQGIEFDYCC H + +L+ +G+ETIM+N N
Sbjct: 537  YLYSTYEEECESRPSDRKKVMILGSGPNRIGQGIEFDYCCVHAALALRESGFETIMVNCN 596

Query: 687  PETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHR 746
            PETVSTD+DTSDRLYFEPLT+EDVL ++  E P G+IV +GGQTPLKL+           
Sbjct: 597  PETVSTDFDTSDRLYFEPLTLEDVLEIVRTENPWGVIVHYGGQTPLKLA----------- 645

Query: 747  LPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEIG 806
              +A  +  V I GTS DSIDAAEDRERF  ++ +L + QP   IA +E +AL  A+EIG
Sbjct: 646  --NALVENGVNIIGTSADSIDAAEDRERFQKVLNDLGLRQPPNRIAHNEEEALVKAEEIG 703

Query: 807  YPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALAD 866
            YP+VVRPSYVLGGRAM+IV++ E L  Y+  AV+V  + PVL+D +L++AIE+DVD ++D
Sbjct: 704  YPLVVRPSYVLGGRAMQIVHSAEELQKYMREAVQVSEDSPVLLDFFLNNAIEVDVDCVSD 763

Query: 867  SCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNC 926
               +VVIGGIM+H+EQAG+HSGDS C +P  ++S    D I   T  +A  L V GLMN 
Sbjct: 764  G-KDVVIGGIMQHVEQAGIHSGDSGCSLPPYSLSEEIQDEIRRQTKAMAYALGVVGLMNV 822

Query: 927  QYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPKH 986
            Q+A+   G V++LE NPRASRTVPFVSKA G PLAK  A  M+G SL + G  KEV+P  
Sbjct: 823  QFAV-QDGVVFVLEVNPRASRTVPFVSKATGVPLAKVGARCMAGISLKEQGVEKEVVPDF 881

Query: 987  VSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVFL 1046
             +VKEAV PF KF G D +LGPEMRSTGEVMG+  SF  A+ KAQ+ AG++L  +G +FL
Sbjct: 882  YAVKEAVFPFIKFPGVDTILGPEMRSTGEVMGVGASFGEAYYKAQLGAGERLNPTGKIFL 941

Query: 1047 SLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVAN 1106
            S+ +  K  + + AK F  +G+ I +T GTA +L   G+ V+ + K+ EGRPH GD + N
Sbjct: 942  SVREEDKERVIKTAKNFQALGYGICATRGTAQYLTEHGLIVQTINKVPEGRPHIGDALKN 1001

Query: 1107 GQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRS 1156
            G+I ++V T S D     D   +R+  L  +VP  TT +G  A +E  +S
Sbjct: 1002 GEIALVVNTVSSDPQSVSDSHIIRQSALQQRVPQYTTTAGGEAMSEGAKS 1051


>gi|421563943|ref|ZP_16009755.1| carbamoyl-phosphate synthase large chain [Neisseria meningitidis
            NM2795]
 gi|421906259|ref|ZP_16336161.1| carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and
            dihydroorotase [Neisseria meningitidis alpha704]
 gi|393292665|emb|CCI72079.1| carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and
            dihydroorotase [Neisseria meningitidis alpha704]
 gi|402339562|gb|EJU74776.1| carbamoyl-phosphate synthase large chain [Neisseria meningitidis
            NM2795]
          Length = 1071

 Score = 1249 bits (3231), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 624/1070 (58%), Positives = 794/1070 (74%), Gaps = 22/1070 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTDL+ ILI+GAGPIVIGQACEFDYSG QACKAL+EEGY+VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDLKSILIIGAGPIVIGQACEFDYSGAQACKALREEGYKVILVNSNPATIMTDPEMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  + VE+++ KERPDA+LPTMGGQTALN A+ LA +G L KY VELIGA  DA
Sbjct: 63   VTYIEPIMWQTVEKIIAKERPDAILPTMGGQTALNCALDLARNGVLAKYNVELIGATEDA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  FK+AM+ IG+  P S + +T++E ++   ++G FP +IRP+FT+GG+GGGI
Sbjct: 123  IDKAEDRGRFKEAMEKIGLSCPKSFVCHTMNEALAAQEQVG-FPTLIRPSFTMGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYNK+EF AIC+ G  AS T ++L+E+S+LGWKEYE+EV+RD  DN +IICSIEN DPMG
Sbjct: 182  AYNKDEFLAICERGFDASPTHELLIEQSVLGWKEYEMEVVRDKNDNCIIICSIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGV+ GGSNVQFAVNP +GE++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQIMRNASLAVLREIGVDTGGSNVQFAVNPENGEMIVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VG++LD++ NDIT  +TPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGFTLDELRNDITGGRTPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            FAFEKFP ++  LTTQMKSVGE MA+GRT QESFQKALR LE G  G+   +      D 
Sbjct: 362  FAFEKFPAADDRLTTQMKSVGEVMAMGRTIQESFQKALRGLETGLCGFNPRS-----SDK 416

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
             +++  L  P P+RM  +  A + G  ++EIHE+  ID WFL Q ++L+  E+ +    +
Sbjct: 417  AEIRRELANPGPERMLFVADAFRAGFTLEEIHEICAIDPWFLAQIEDLMKEEKAVSDGIL 476

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
            S++       +KR+GFSDK+IA      EKEVRE R +L + P YKRVDTCAAEF   T 
Sbjct: 477  SDLDFAALRRLKRKGFSDKRIAQLLGVKEKEVREHRYALKLHPVYKRVDTCAAEFATETA 536

Query: 627  YMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSN 686
            Y+YS+Y+ ECES P+ +KKV+ILGGGPNRIGQGIEFDYCC H + +L+ +G+ETIM+N N
Sbjct: 537  YLYSTYEEECESRPSDRKKVMILGGGPNRIGQGIEFDYCCVHAALALRESGFETIMVNCN 596

Query: 687  PETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHR 746
            PETVSTD+DTSDRLYFEPLT+EDVL ++  E P G+IV +GGQTPLKL+           
Sbjct: 597  PETVSTDFDTSDRLYFEPLTLEDVLEIVRTENPWGVIVHYGGQTPLKLA----------- 645

Query: 747  LPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEIG 806
              +A  +  V I GTS DSIDAAEDRERF  ++ +L + QP   IA +E +AL  A+EIG
Sbjct: 646  --NALVENGVNIIGTSADSIDAAEDRERFQKVLNDLGLRQPPNRIAHNEEEALVRAEEIG 703

Query: 807  YPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALAD 866
            YP+VVRPSYVLGGRAM+IV++ E L  Y+  AV+V  + PVL+D +L++AIE+DVD ++D
Sbjct: 704  YPLVVRPSYVLGGRAMQIVHSAEALQKYMREAVQVSEDSPVLLDFFLNNAIEVDVDCVSD 763

Query: 867  SCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNC 926
               +VVIGGIM+H+EQAG+HSGDS C +P  ++S    D I   T  +A  L V GLMN 
Sbjct: 764  G-KDVVIGGIMQHVEQAGIHSGDSGCSLPPYSLSEEIQDEIRRQTKAMAYALGVVGLMNV 822

Query: 927  QYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPKH 986
            Q+A+   G V++LE NPRASRTVPFVSKA G PLAK  A  M+G SL + G  KEV+P  
Sbjct: 823  QFAV-QDGVVFVLEVNPRASRTVPFVSKATGVPLAKVGARCMAGISLKEQGVEKEVVPDF 881

Query: 987  VSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVFL 1046
             +VKEAV PF KF G D +LGPEMRSTGEVMG+  SF  A+ KAQ+ AG++L  +G +FL
Sbjct: 882  YAVKEAVFPFIKFPGVDTILGPEMRSTGEVMGVGASFGEAYYKAQLGAGERLNPTGKIFL 941

Query: 1047 SLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVAN 1106
            S+ +  K  + + AK F  +G+ I +T GTA +L   G+ V+ + K+ EGRPH GD + N
Sbjct: 942  SVREEDKERVIKTAKNFQVLGYGICATRGTAQYLTEHGLIVQTINKVPEGRPHIGDALKN 1001

Query: 1107 GQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRS 1156
            G+I ++V T S D     D   +R+  L  +VP  TT +G  A +E  +S
Sbjct: 1002 GEIALVVNTVSSDPQSVSDSHIIRQSALQQRVPQYTTTAGGEAMSEGAKS 1051


>gi|240013361|ref|ZP_04720274.1| carbamoyl phosphate synthase large subunit [Neisseria gonorrhoeae
            DGI18]
 gi|240120434|ref|ZP_04733396.1| carbamoyl phosphate synthase large subunit [Neisseria gonorrhoeae
            PID24-1]
          Length = 1071

 Score = 1249 bits (3231), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 622/1070 (58%), Positives = 793/1070 (74%), Gaps = 22/1070 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTDL+ ILI+GAGPIVIGQACEFDYSG QACKAL+EEGY+VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDLKSILIIGAGPIVIGQACEFDYSGAQACKALREEGYKVILVNSNPATIMTDPEMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  + VE+++ KERPDA+LPTMGGQTALN A+ LA +G L KY VELIGA  DA
Sbjct: 63   VTYIEPIMWQTVEKIIAKERPDAILPTMGGQTALNCALDLARNGVLAKYNVELIGATEDA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  FK+AM+ IG+  P S + +T++E ++   ++G FP +IRP+FT+GG+GGGI
Sbjct: 123  IDKAEDRGRFKEAMEKIGLSCPKSFVCHTMNEALAAQEQVG-FPTLIRPSFTMGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYNK+EF AIC+ G  AS T ++L+E+S+LGWKEYE+EV+RD ADN +IICSIEN DPMG
Sbjct: 182  AYNKDEFLAICERGFDASPTHELLIEQSVLGWKEYEMEVVRDKADNCIIICSIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGV+ GGSNVQFAVNP +GE++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQIMRNASLAVLREIGVDTGGSNVQFAVNPENGEMIVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VG++LD++ NDIT  +TPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGFTLDELRNDITGGRTPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            FAFEKFP ++  LTTQMKSVGE MA+GRT QESFQKALR LE G  G+   +      D 
Sbjct: 362  FAFEKFPAADDRLTTQMKSVGEVMAMGRTIQESFQKALRGLETGLCGFNPRS-----EDK 416

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
             +++  L  P P+RM  +  A + G   +EIHE+  ID WFL Q ++L+  E+ +    +
Sbjct: 417  AEIRRELANPGPERMLFVADAFRAGFTPEEIHEICAIDPWFLAQIEDLMKEEKSVSDGQL 476

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
             ++       +KR+GFSDK++A     +EKEVRE R +L + P YKR DTCAAEF   T 
Sbjct: 477  QDLDYAALRRLKRKGFSDKRLAQLLNVSEKEVREHRYALKLHPVYKRADTCAAEFATETA 536

Query: 627  YMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSN 686
            Y+YS+Y+ ECES P+ +KKV+ILGGGPNRIGQGIEFDYCC H + +L+ +G+ETIM+N N
Sbjct: 537  YLYSTYEEECESRPSDRKKVMILGGGPNRIGQGIEFDYCCVHAALALRESGFETIMVNCN 596

Query: 687  PETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHR 746
            PETVSTD+DTSDRLYFEPLT+EDVL ++  E P G+IV +GGQTPLKL+           
Sbjct: 597  PETVSTDFDTSDRLYFEPLTLEDVLEIVRTENPWGVIVHYGGQTPLKLA----------- 645

Query: 747  LPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEIG 806
              +A  +  V I GTS DSIDAAEDRERF  ++ +L + QP   IA +E +AL  A+EIG
Sbjct: 646  --NALVENGVNIIGTSADSIDAAEDRERFQKVLNDLGLRQPPNRIAHNEEEALVKAEEIG 703

Query: 807  YPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALAD 866
            YP+VVRPSYVLGGRAM+IV++ E L  Y+  AV+V  + PVL+D +L++AIE+DVD ++D
Sbjct: 704  YPLVVRPSYVLGGRAMQIVHSAEQLQKYMREAVQVSEDSPVLLDFFLNNAIEVDVDCVSD 763

Query: 867  SCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNC 926
               +VVIGGIM+H+EQAG+HSGDS C +P  ++S    D I   T  +A  L V GLMN 
Sbjct: 764  G-KDVVIGGIMQHVEQAGIHSGDSGCSLPPYSLSEEIQDEIRRQTKAMAYALGVVGLMNV 822

Query: 927  QYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPKH 986
            Q+A+   G V++LE NPRASRTVPFVSKA G PLAK  A  M+G SL + G  KEV+P  
Sbjct: 823  QFAV-QDGVVFVLEVNPRASRTVPFVSKATGVPLAKVGARCMAGISLKEQGVEKEVVPDF 881

Query: 987  VSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVFL 1046
             +VKEAV PF KF G D +LGPEMRSTGEVMG+  SF  A+ KAQ+ AG++L  +G +FL
Sbjct: 882  YAVKEAVFPFIKFPGVDTILGPEMRSTGEVMGVGASFGEAYYKAQLGAGERLNPTGKIFL 941

Query: 1047 SLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVAN 1106
            S+ +  K  + + AK F  +G+ I +T GTA +L   G+ V+ + K+ EGRPH GD + N
Sbjct: 942  SVREEDKERVIKTAKNFQALGYGICATRGTAQYLTEHGLIVQAINKVPEGRPHIGDALKN 1001

Query: 1107 GQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRS 1156
            G+I ++V T S D     D   +R+  L  +VP  TT +G  A +E  +S
Sbjct: 1002 GEIALVVNTVSSDPQSVSDSHIIRQSALQQRVPQYTTTAGGEAMSEGAKS 1051



 Score =  249 bits (636), Expect = 7e-63,   Method: Compositional matrix adjust.
 Identities = 151/422 (35%), Positives = 238/422 (56%), Gaps = 19/422 (4%)

Query: 62  RASSAKIDSSAELSNGAASSKDQKLGKRTDLRKILILGAGPIVIGQACEFDYSGTQACKA 121
           RA +   + + E +   ++ +++   + +D +K++ILG GP  IGQ  EFDY    A  A
Sbjct: 523 RADTCAAEFATETAYLYSTYEEECESRPSDRKKVMILGGGPNRIGQGIEFDYCCVHAALA 582

Query: 122 LKEEGYEVILINSNPATIMTDPGLADRTYITPMTPELVEQVLEKERPDALLPTMGGQTAL 181
           L+E G+E I++N NP T+ TD   +DR Y  P+T E V +++  E P  ++   GGQT L
Sbjct: 583 LRESGFETIMVNCNPETVSTDFDTSDRLYFEPLTLEDVLEIVRTENPWGVIVHYGGQTPL 642

Query: 182 NLAVALAESGALEKYGVELIGAKLDAIKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECI 241
            LA AL E+      GV +IG   D+I  AEDR+ F++ +  +G++ PP+ I +  +E +
Sbjct: 643 KLANALVEN------GVNIIGTSADSIDAAEDRERFQKVLNDLGLRQPPNRIAHNEEEAL 696

Query: 242 SIANEIGEFPLIIRPAFTLGGTGGGIAYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKE 301
             A EIG +PL++RP++ LGG    I ++ E+ +   +  +  S  S VL++  L    E
Sbjct: 697 VKAEEIG-YPLVVRPSYVLGGRAMQIVHSAEQLQKYMREAVQVSEDSPVLLDFFLNNAIE 755

Query: 302 YELEVMRDLADNVVIICSIENVDPMGVHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREI 361
            +++ + D  D VVI   +++V+  G+H+GDS    P  +L+++    +R  + A+   +
Sbjct: 756 VDVDCVSDGKD-VVIGGIMQHVEQAGIHSGDSGCSLPPYSLSEEIQDEIRRQTKAMAYAL 814

Query: 362 GVECGGSNVQFAVNPVDGEVMVIEMNPRVSRSSALASKATGFPIAKMAAKLSVGYSLDQI 421
           GV  G  NVQFAV   DG V V+E+NPR SR+    SKATG P+AK+ A+   G SL   
Sbjct: 815 GV-VGLMNVQFAVQ--DGVVFVLEVNPRASRTVPFVSKATGVPLAKVGARCMAGISL--- 868

Query: 422 PNDITKKTPASFEPSIDYVVTKIPRFAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQ 481
                K+     E   D+   K   F F KFPG + +L  +M+S GE M +G +F E++ 
Sbjct: 869 -----KEQGVEKEVVPDFYAVKEAVFPFIKFPGVDTILGPEMRSTGEVMGVGASFGEAYY 923

Query: 482 KA 483
           KA
Sbjct: 924 KA 925


>gi|384082741|ref|ZP_09993916.1| carbamoyl phosphate synthase large subunit [gamma proteobacterium
            HIMB30]
          Length = 1074

 Score = 1249 bits (3231), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 635/1089 (58%), Positives = 802/1089 (73%), Gaps = 30/1089 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTDL  ILI+GAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDLESILIIGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPAMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  + V +V+EKERP ALLPTMGGQTALN A+ L   G LEKYGV+LIGA  DA
Sbjct: 63   ATYIEPIRWQSVAKVIEKERPSALLPTMGGQTALNCALDLDREGVLEKYGVQLIGANADA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDRD F +AMK IG++TP S I +++DE  S A+E+G FP IIRP+FT+GG+GGG+
Sbjct: 123  IDKAEDRDRFDKAMKAIGLETPRSHIAHSMDEARSAADELG-FPCIIRPSFTMGGSGGGV 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEFE IC+ GL  S T+++L+++SLLGWKEYE+EV+RD  DN +I+CSIEN DPMG
Sbjct: 182  AYNREEFEEICERGLDLSPTNELLIDESLLGWKEYEMEVVRDRKDNCIIVCSIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGVE GGSNVQF VNP +G ++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQIMRNASVAVLREIGVETGGSNVQFGVNPDNGRLVVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITK-KTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ N+IT   TPASFEPSIDYVVTK+PR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGYTLDELANEITGGATPASFEPSIDYVVTKVPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            F FEKFP ++  LTTQMKSVGE MA+GR+FQES QKALR LE G SG   +     +WD 
Sbjct: 362  FTFEKFPQADSRLTTQMKSVGEVMAIGRSFQESMQKALRGLEIGVSGLDPT----FEWDS 417

Query: 507  EQ----LKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLL 562
            E+    +++ L  P P R+  +  A + GM +DE+ ++S ID WFL Q ++L+  E  L 
Sbjct: 418  EESVQAMRHELANPGPRRLWCVADAFRSGMSIDEVFQVSKIDPWFLAQIEDLVWDEARLT 477

Query: 563  TQSVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFE 622
              ++S++ +D  + +KR+GFSDK++A     +EKE+RE+RL L V P YKRVDTCA EF 
Sbjct: 478  EMALSDLDRDSLWRLKRKGFSDKRLAVLLDVSEKELRERRLKLDVRPVYKRVDTCAGEFA 537

Query: 623  ANTPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIM 682
              T Y+YS+Y+ ECE+ P+ + K+++LGGGPNRIGQGIEFDYCC H +F+++  GYETIM
Sbjct: 538  TPTAYLYSTYEEECEANPSSRDKIMVLGGGPNRIGQGIEFDYCCVHAAFAMREDGYETIM 597

Query: 683  MNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYL 742
            +N NPETVSTDYDTSDRL+FEP+T+EDVL ++D+E+P+G+IVQFGGQTPLKL+       
Sbjct: 598  VNCNPETVSTDYDTSDRLFFEPVTLEDVLAIVDIEQPKGVIVQFGGQTPLKLA------- 650

Query: 743  DEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIA 802
               R   ASG   V I GTSP++ID AEDRERF  ++  L + QP    A+S  + LA+A
Sbjct: 651  ---RELEASG---VPIIGTSPEAIDRAEDRERFQQMVTRLGLRQPANATARSLEEGLALA 704

Query: 803  KEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVD 862
            + IG+P+VVRPSYVLGGRAME+V     L  YL++AV    + PVL+D +L  AIE+DVD
Sbjct: 705  ESIGFPLVVRPSYVLGGRAMEVVSNLSELKRYLQDAVVASDDSPVLLDHFLDPAIEVDVD 764

Query: 863  ALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCG 922
            A++D   +VVIG IMEHIEQAGVHSGDSAC +P  ++     D I    I++A+ LNV G
Sbjct: 765  AVSDG-EHVVIGAIMEHIEQAGVHSGDSACSLPPYSLPKHIQDEIRDQVIRMARELNVVG 823

Query: 923  LMNCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEV 982
            LMN Q A+    DVY++E NPRASRTVPFVSK IG  LAK AA  M+G SL     TKE+
Sbjct: 824  LMNVQMAVQGE-DVYVIEVNPRASRTVPFVSKCIGVSLAKVAARCMAGTSLEAQNMTKEL 882

Query: 983  IPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSG 1042
            IP + SVKE+V PF KF G D +LGPEM+STGEVMG   SF  AFAKA  AAG +LP  G
Sbjct: 883  IPPYFSVKESVFPFAKFPGVDPILGPEMKSTGEVMGTGDSFDEAFAKAHAAAGDRLPSIG 942

Query: 1043 TVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGD 1102
              F+S+ D  K     +A+  +D+GF++V+T GT  +L+  GIA ERV K+ EGRP+  D
Sbjct: 943  RAFVSVRDADKVRAGALAQTLIDMGFELVATGGTCDYLQNAGIACERVNKVMEGRPNIVD 1002

Query: 1103 MVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLK-SNT 1161
            M+ N  I  +V T+ G      D   +RR  L +KV   TT++G       +R+LK  N 
Sbjct: 1003 MIKNDAIAFIVNTTEGRQA-ITDSATIRRSALNHKVCYTTTLAGG---ESIVRALKFGNE 1058

Query: 1162 VTMTALQDF 1170
              +  LQ+ 
Sbjct: 1059 REVRRLQEL 1067


>gi|418729672|ref|ZP_13288219.1| carbamoyl-phosphate synthase, large subunit [Leptospira interrogans
            str. UI 12758]
 gi|410775850|gb|EKR55841.1| carbamoyl-phosphate synthase, large subunit [Leptospira interrogans
            str. UI 12758]
          Length = 1106

 Score = 1249 bits (3231), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 638/1119 (57%), Positives = 805/1119 (71%), Gaps = 58/1119 (5%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            +R D+R +LILG+GPIVIGQACEFDYSGTQA KALKE+G  VIL+NSNPATIMTDP LAD
Sbjct: 3    RREDIRSVLILGSGPIVIGQACEFDYSGTQAAKALKEKGIRVILLNSNPATIMTDPDLAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TY+ PMT  +V+++LEKE+PDA+LPT+GGQTALNLA+A   +G LEKY VELIGAK+DA
Sbjct: 63   ATYVEPMTVPVVQKILEKEKPDAILPTVGGQTALNLALACNSAGILEKYNVELIGAKVDA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            IKKAEDR+LFK+AM+ IGV+ P SG+ N L + + I N++G  PLI+RPAFTLGGTGGGI
Sbjct: 123  IKKAEDRELFKKAMEKIGVRVPASGLANNLKDAVEIKNKLG-LPLIVRPAFTLGGTGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AY +E FE +   GL AS  SQVL+E+S+LGWKE+ELEVMRDLADNVVIICSIEN+DPMG
Sbjct: 182  AYTEETFEEVVSKGLKASPISQVLLEESVLGWKEFELEVMRDLADNVVIICSIENIDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAP QTL+DKEYQ LRD SIAIIREIGVE GGSN+QFAVNP +G+V+VIEMN
Sbjct: 242  VHTGDSITVAPQQTLSDKEYQNLRDMSIAIIREIGVETGGSNIQFAVNPTNGDVIVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRF 447
            PRVSRSSALASKATGFPIAK+AA LS+GY+LD+I NDIT+ TPASFEPSIDYVVTK+PRF
Sbjct: 302  PRVSRSSALASKATGFPIAKIAALLSIGYTLDEIKNDITRVTPASFEPSIDYVVTKVPRF 361

Query: 448  AFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSN-VKEL---- 502
            AFEKFPG++  L  QMK+VGEAMA+GRTF+ESFQKALRSLE    G+G     +EL    
Sbjct: 362  AFEKFPGTDDTLGVQMKAVGEAMAIGRTFKESFQKALRSLEIDRYGFGSDGYFQELLYSR 421

Query: 503  ----DWDWEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVE 558
                D   E +   L+ PN  R+  +  A  +G  VD+IH+L  ID+WFL Q + L+ +E
Sbjct: 422  SLNNDQRKEWIDSHLKRPNDKRIFYVKLAFDEGYTVDQIHDLCKIDRWFLWQMEGLLKLE 481

Query: 559  QFLLTQSVSNMTKDDFYEVKRRGFSDKQIAFAT--------------------------K 592
                 +  S       Y++K+ GFS++Q++F                            K
Sbjct: 482  -----KEYSEKGNSILYKMKQVGFSNRQLSFLKNKKQILDLLDRNLRVDLKKTEIQNLLK 536

Query: 593  STEKEVREKRLSLGVIPSYKRVDTCAAEFEANTPYMYSSYDFECESAPTQKKKVLILGGG 652
             +E+E+  +  S  ++P YKR+DTCA EFEA TPY YSSYD E ES  T  K V+ILGGG
Sbjct: 537  LSEEEIEVELGSKKILPVYKRIDTCAGEFEAYTPYFYSSYDEEDESDVTNAKSVMILGGG 596

Query: 653  PNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSNPETVSTDYDTSDRLYFEPLTVEDVLN 712
            PNRIGQGIEFDYCCC  S++LQ  G E+IM+NSNPETVSTDYDTSDRLYFEPLT+EDV  
Sbjct: 597  PNRIGQGIEFDYCCCQASYALQDLGIESIMINSNPETVSTDYDTSDRLYFEPLTLEDVYR 656

Query: 713  VIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHRLPSASGDGLVRIWGTSPDSIDAAEDR 772
            +   E+PEG+I+QFGGQTPLKL+  + +           G   V+I GTSPDSID AEDR
Sbjct: 657  IYQNEKPEGVIIQFGGQTPLKLAKDLEK----------KG---VKILGTSPDSIDRAEDR 703

Query: 773  ERFNAIIKELSIEQPKGGIAKSEADALAIAKEIGYPVVVRPSYVLGGRAMEIVYTDETLV 832
            +RF  ++++L +  P+ GIA S  +A  IA +IGYPV+VRPSYVLGGRAM I+  ++ L 
Sbjct: 704  KRFVEVLEKLKLNSPESGIATSMEEAREIAHKIGYPVLVRPSYVLGGRAMLIINEEKELD 763

Query: 833  TYLENAVEVDPERPVLIDKYLSDAIEIDVDALADSCGNVVIGGIMEHIEQAGVHSGDSAC 892
             Y+E A E+  +RP+LID +L DAIE+DVDAL D    V + GIMEHIE+AG+HSGDSAC
Sbjct: 764  RYMEKAEEISKDRPLLIDSFLEDAIEVDVDALCDG-KEVFVTGIMEHIEEAGIHSGDSAC 822

Query: 893  MIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNCQYAITTSGDVYLLEANPRASRTVPFV 952
            ++P +T+S + +D I   T+ LA  L V GL+N QYA+     +Y++E NPRASRTVPFV
Sbjct: 823  VLPPQTLSKNMMDEIRKATVNLALELQVKGLINIQYAVKNE-ILYIIEVNPRASRTVPFV 881

Query: 953  SKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRS 1012
            SKA+GHP+ KYA  +M G+SL  L   KE+    VSVKE VLPF KF G D +LGPEMRS
Sbjct: 882  SKALGHPIVKYATRIMMGESLKSLPLPKEMEFSQVSVKEVVLPFNKFPGVDTILGPEMRS 941

Query: 1013 TGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVFLSLNDLTKPHLERIAKAFLDIGFKIVS 1072
            TGEVMGI  +   AF K+Q  AG +LP  GTVF+S+ND TK  L    K   ++GF +++
Sbjct: 942  TGEVMGIASTAGEAFLKSQYMAGDELPSQGTVFVSINDKTKAELLSYIKDLSELGFNLIA 1001

Query: 1073 TSGTAHFLELKGIAVERVLKMHEG-RPHAGDMVANGQIQMMVITSSGDSLDQIDGLKLRR 1131
            TSGT  FL   GI   ++ K+++G  P A D +   +I  ++I +    + + D   +R+
Sbjct: 1002 TSGTHKFLSDNGILSSKINKVYDGIFPTALDYIRENKIH-LIINTPLSRVTRDDSFTIRQ 1060

Query: 1132 RGLAYKVPVITTVSGALANAEAIRSLKSNTVTMTALQDF 1170
              + +KVP +TT + A A  + +  +K+   T+ +LQ+ 
Sbjct: 1061 AAIRFKVPCLTTSNAAKALIKGMVEMKNKGFTIHSLQEI 1099


>gi|421566199|ref|ZP_16011955.1| carbamoyl-phosphate synthase large chain [Neisseria meningitidis
            NM3081]
 gi|402340808|gb|EJU75999.1| carbamoyl-phosphate synthase large chain [Neisseria meningitidis
            NM3081]
          Length = 1071

 Score = 1249 bits (3231), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 625/1070 (58%), Positives = 793/1070 (74%), Gaps = 22/1070 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTDL+ ILI+GAGPIVIGQACEFDYSG QACKAL+EEGY+VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDLKSILIIGAGPIVIGQACEFDYSGAQACKALREEGYKVILVNSNPATIMTDPEMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  + VE+++ KERPDA+LPTMGGQTALN A+ LA +G L KY VELIGA  DA
Sbjct: 63   VTYIEPIMWQTVEKIIAKERPDAILPTMGGQTALNCALDLARNGVLAKYNVELIGATEDA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  FK+AM+ IG+  P S + +T++E ++   ++G FP +IRP+FT+GG+GGGI
Sbjct: 123  IDKAEDRGRFKEAMEKIGLSCPKSFVCHTMNEALAAQEQVG-FPTLIRPSFTMGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYNK+EF AIC+ G  AS T ++L+E+S+LGWKEYE+EV+RD  DN +IICSIEN DPMG
Sbjct: 182  AYNKDEFLAICERGFDASPTHELLIEQSVLGWKEYEMEVVRDKNDNCIIICSIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGV+ GGSNVQFAVNP +GE++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQIMRNASLAVLREIGVDTGGSNVQFAVNPENGEMIVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VG++LD++ NDIT  KTPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGFTLDELRNDITGGKTPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            FAFEKFP ++  LTTQMKSVGE MA+GRT QESFQKALR LE G  G+   +      D 
Sbjct: 362  FAFEKFPAADDRLTTQMKSVGEVMAMGRTIQESFQKALRGLETGLCGFNPRS-----SDK 416

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
             +++  L  P P+RM  +  A + G   +EIHE+  ID WFL Q ++L+  E+ +    +
Sbjct: 417  AEIRRELANPGPERMLFVADAFRAGFTPEEIHEICAIDPWFLAQIEDLVKEEKSVSDGIL 476

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
            S++       +KR+GFSDK+IA      EKEVRE R +L + P YKRVDTCAAEF   T 
Sbjct: 477  SDLDFAALRRLKRKGFSDKRIAQLLGVKEKEVREHRYALKLHPVYKRVDTCAAEFATETA 536

Query: 627  YMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSN 686
            Y+YS+Y+ ECES P+ +KKV+ILGGGPNRIGQGIEFDYCC H + +L+ +G+ETIM+N N
Sbjct: 537  YLYSTYEEECESRPSDRKKVMILGGGPNRIGQGIEFDYCCVHAALALRESGFETIMVNCN 596

Query: 687  PETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHR 746
            PETVSTD+DTSDRLYFEPLT+EDVL ++  E P G+IV +GGQTPLKL+           
Sbjct: 597  PETVSTDFDTSDRLYFEPLTLEDVLEIVRTENPWGVIVHYGGQTPLKLA----------- 645

Query: 747  LPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEIG 806
              +A  +  V I GTS DSIDAAEDRERF  ++ +L + QP   IA +E +AL  A+EIG
Sbjct: 646  --NALVENGVNIIGTSADSIDAAEDRERFQKVLNDLGLRQPPNRIAHNEEEALVKAEEIG 703

Query: 807  YPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALAD 866
            YP+VVRPSYVLGGRAM+IV++ E L  Y+  AV+V  + PVL+D +L++AIE+DVD ++D
Sbjct: 704  YPLVVRPSYVLGGRAMQIVHSAEALQKYMREAVQVSEDSPVLLDFFLNNAIEVDVDCVSD 763

Query: 867  SCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNC 926
               +VVIGGIM+H+EQAG+HSGDS C +P  ++S    D I   T  +A  L V GLMN 
Sbjct: 764  G-KDVVIGGIMQHVEQAGIHSGDSGCSLPPYSLSEEIQDEIRRQTKAMAYALGVVGLMNV 822

Query: 927  QYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPKH 986
            Q+A+   G V++LE NPRASRTVPFVSKA G PLAK  A  M+G SL + G  KEV+P  
Sbjct: 823  QFAV-QDGVVFVLEVNPRASRTVPFVSKATGVPLAKVGARCMAGISLKEQGVEKEVVPDF 881

Query: 987  VSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVFL 1046
             +VKEAV PF KF G D +LGPEMRSTGEVMG+  SF  A+ KAQ+ AG++L  +G +FL
Sbjct: 882  YAVKEAVFPFIKFPGVDTILGPEMRSTGEVMGVGASFGEAYYKAQLGAGERLNPTGKIFL 941

Query: 1047 SLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVAN 1106
            S+ +  K  + + AK F  +G+ I +T GTA +L   G+ V+ + K+ EGRPH GD + N
Sbjct: 942  SVREEDKERVIKTAKNFQVLGYGICATRGTAQYLTEHGLIVQTINKVPEGRPHIGDALKN 1001

Query: 1107 GQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRS 1156
            G+I ++V T S D     D   +R+  L  +VP  TT +G  A +E  +S
Sbjct: 1002 GEIALVVNTVSSDPQSVSDSHIIRQSALQQRVPQYTTTAGGEAMSEGAKS 1051


>gi|268602785|ref|ZP_06136952.1| carbamoyl-phosphate synthase subunit large [Neisseria gonorrhoeae
            PID1]
 gi|268683505|ref|ZP_06150367.1| carbamoyl-phosphate synthase subunit large [Neisseria gonorrhoeae
            SK-92-679]
 gi|268586916|gb|EEZ51592.1| carbamoyl-phosphate synthase subunit large [Neisseria gonorrhoeae
            PID1]
 gi|268623789|gb|EEZ56189.1| carbamoyl-phosphate synthase subunit large [Neisseria gonorrhoeae
            SK-92-679]
          Length = 1071

 Score = 1249 bits (3231), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 622/1070 (58%), Positives = 793/1070 (74%), Gaps = 22/1070 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTDL+ ILI+GAGPIVIGQACEFDYSG QACKAL+EEGY+VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDLKSILIIGAGPIVIGQACEFDYSGAQACKALREEGYKVILVNSNPATIMTDPEMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  + VE+++ KERPDA+LPTMGGQTALN A+ LA +G L KY VELIGA  DA
Sbjct: 63   VTYIEPIMWQTVEKIIAKERPDAILPTMGGQTALNCALDLARNGVLAKYNVELIGATEDA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  FK+AM+ IG+  P S + +T++E ++   ++G FP +IRP+FT+GG+GGGI
Sbjct: 123  IDKAEDRGRFKEAMEKIGLSCPKSFVCHTMNEALAAQEQVG-FPTLIRPSFTMGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYNK+EF AIC+ G  AS T ++L+E+S+LGWKEYE+EV+RD ADN +IICSIEN DPMG
Sbjct: 182  AYNKDEFLAICERGFDASPTHELLIEQSVLGWKEYEMEVVRDKADNCIIICSIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGV+ GGSNVQFAVNP +GE++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQIMRNASLAVLREIGVDTGGSNVQFAVNPENGEMIVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VG++LD++ NDIT  +TPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGFTLDELRNDITGGRTPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            FAFEKFP ++  LTTQMKSVGE MA+GRT QESFQKALR LE G  G+   +      D 
Sbjct: 362  FAFEKFPAADDRLTTQMKSVGEVMAMGRTIQESFQKALRGLETGLCGFNPRS-----EDK 416

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
             +++  L  P P+RM  +  A + G   +EIHE+  ID WFL Q ++L+  E+ +    +
Sbjct: 417  AEIRRELANPGPERMLFVADAFRAGFTPEEIHEICAIDPWFLAQIEDLMKEEKSVSDGQL 476

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
             ++       +KR+GFSDK++A     +EKEVRE R +L + P YKRVDTCAAEF   T 
Sbjct: 477  QDLDYAALRRLKRKGFSDKRLAQLLNVSEKEVREHRYALKLHPVYKRVDTCAAEFATETA 536

Query: 627  YMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSN 686
            Y+YS+Y+ ECES P+ +KKV+ILGGGPNRIGQGIEFDYCC H + +L+ +G+ETIM+N N
Sbjct: 537  YLYSTYEEECESRPSDRKKVMILGGGPNRIGQGIEFDYCCVHAALALRESGFETIMVNCN 596

Query: 687  PETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHR 746
            PETVSTD+DTSDRLYFEPLT+EDVL ++  E P G+IV +GGQTPLKL+           
Sbjct: 597  PETVSTDFDTSDRLYFEPLTLEDVLEIVRTENPWGVIVHYGGQTPLKLA----------- 645

Query: 747  LPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEIG 806
              +A  +  V I GTS DSIDAAEDRERF  ++ +L + QP   IA +E +AL  A+EIG
Sbjct: 646  --NALVENGVNIIGTSADSIDAAEDRERFQKVLNDLGLRQPPNRIAHNEEEALVKAEEIG 703

Query: 807  YPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALAD 866
            YP+VVRPSYVLGGRAM+IV++ E L  Y+  AV+V  + PVL+D +L++AIE+DVD ++D
Sbjct: 704  YPLVVRPSYVLGGRAMQIVHSAEALQKYMREAVQVSEDSPVLLDFFLNNAIEVDVDCVSD 763

Query: 867  SCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNC 926
               +VVIGGIM+H+EQAG+HSGDS C +P  ++S    D I   T  +A  L V GLMN 
Sbjct: 764  G-KDVVIGGIMQHVEQAGIHSGDSGCSLPPYSLSEEIQDEIRRQTKAMAYALGVVGLMNV 822

Query: 927  QYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPKH 986
            Q+A+   G V++LE NPRASRTVPFVSKA G PLAK  A  M+G SL + G  KEV+P  
Sbjct: 823  QFAV-QDGVVFVLEVNPRASRTVPFVSKATGVPLAKVGARCMAGISLKEQGVEKEVVPDF 881

Query: 987  VSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVFL 1046
             +VKEAV PF KF G D +L PEMRSTGEVMG+  SF  A+ KAQ+ AG++L  +G +FL
Sbjct: 882  YAVKEAVFPFIKFPGVDTILSPEMRSTGEVMGVGASFGEAYYKAQLGAGERLNPTGKIFL 941

Query: 1047 SLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVAN 1106
            S+ +  K  + + AK F  +G+ I +T GTA +L   G+ V+ + K+ EGRPH GD + N
Sbjct: 942  SVREEDKERVIKTAKNFQALGYGICATRGTAQYLTEHGLIVQAINKVPEGRPHIGDALKN 1001

Query: 1107 GQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRS 1156
            G+I ++V T S D     D   +R+  L  +VP  TT +G  A +E  +S
Sbjct: 1002 GEIALVVNTVSSDPQSVSDSHIIRQSALQQRVPQYTTTAGGEAMSEGAKS 1051


>gi|254804321|ref|YP_003082542.1| carbamoyl phosphate synthase large subunit [Neisseria meningitidis
            alpha14]
 gi|254667863|emb|CBA03922.1| carbamoyl-phosphate synthase large chain [Neisseria meningitidis
            alpha14]
          Length = 1071

 Score = 1249 bits (3231), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 624/1070 (58%), Positives = 795/1070 (74%), Gaps = 22/1070 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTDL+ ILI+GAGPIVIGQACEFDYSG QACKAL+EEGY+VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDLKSILIIGAGPIVIGQACEFDYSGAQACKALREEGYKVILVNSNPATIMTDPEMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  + VE+++ KERPDA+LPTMGGQTALN A+ LA +G L KY VELIGA  DA
Sbjct: 63   VTYIEPIMWQTVEKIIAKERPDAILPTMGGQTALNCALDLARNGVLAKYNVELIGATEDA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  FK+AM+ IG+  P S + +T++E ++   ++G FP +IRP+FT+GG+GGGI
Sbjct: 123  IDKAEDRGRFKEAMEKIGLSCPKSFVCHTMNEALAAQEQVG-FPTLIRPSFTMGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYNK+EF AIC+ G  AS T ++L+E+S+LGWKEYE+EV+RD  DN +IICSIEN DPMG
Sbjct: 182  AYNKDEFLAICERGFDASPTHELLIEQSVLGWKEYEMEVVRDKNDNCIIICSIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGV+ GGSNVQFAVNP +GE++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQIMRNASLAVLREIGVDTGGSNVQFAVNPENGEMIVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VG++LD++ NDIT  +TPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGFTLDELRNDITGGRTPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            FAFEKFP ++  LTTQMKSVGE MA+GRT QESFQKALR LE G  G+   +      D 
Sbjct: 362  FAFEKFPAADDRLTTQMKSVGEVMAMGRTIQESFQKALRGLETGLCGFNPRS-----SDK 416

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
             +++  L  P P+RM  +  A + G  ++EIHE+  ID WFL Q ++L+  E+ +    +
Sbjct: 417  AEIRRELANPGPERMLFVADAFRAGFTLEEIHEICAIDPWFLAQIEDLMKEEKAVSDGIL 476

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
            S++       +KR+GFSDK+IA      EKEVRE R +L + P YKRVDTCAAEF   T 
Sbjct: 477  SDLDFAALRRLKRKGFSDKRIAQLLGVKEKEVREHRYALKLHPVYKRVDTCAAEFATETA 536

Query: 627  YMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSN 686
            Y+YS+Y+ ECE+ P+ +KKV+ILGGGPNRIGQGIEFDYCC H + +L+ +G+ETIM+N N
Sbjct: 537  YLYSTYEEECEARPSDRKKVMILGGGPNRIGQGIEFDYCCVHAALALRESGFETIMVNCN 596

Query: 687  PETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHR 746
            PETVSTD+DTSDRLYFEPLT+EDVL ++  E P G+IV +GGQTPLKL+           
Sbjct: 597  PETVSTDFDTSDRLYFEPLTLEDVLEIVRTENPWGVIVHYGGQTPLKLA----------- 645

Query: 747  LPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEIG 806
              +A  +  V I GTS DSIDAAEDRERF  ++ +L + QP   IA +E +AL  A+EIG
Sbjct: 646  --NALVENGVNIIGTSADSIDAAEDRERFQKVLNDLGLRQPPNRIAHNEEEALVKAEEIG 703

Query: 807  YPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALAD 866
            YP+VVRPSYVLGGRAM+IV++ E L  Y+  AV+V  + PVL+D +L++AIEIDVD ++D
Sbjct: 704  YPLVVRPSYVLGGRAMQIVHSAEQLQKYMREAVQVSEDSPVLLDFFLNNAIEIDVDCVSD 763

Query: 867  SCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNC 926
               +VVIGGIM+H+EQAG+HSGDS C +P  ++S    D I   T  +A  L V GLMN 
Sbjct: 764  G-KDVVIGGIMQHVEQAGIHSGDSGCSLPPYSLSEEIQDEIRRQTKAMAYALGVVGLMNV 822

Query: 927  QYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPKH 986
            Q+A+   G V++LE NPRASRTVPFVSKA G PLAK  A  M+G SL + G  KEV+P  
Sbjct: 823  QFAV-QDGVVFVLEVNPRASRTVPFVSKATGVPLAKVGARCMAGISLKEQGVEKEVVPDF 881

Query: 987  VSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVFL 1046
             +VKEAV PF KF G D +LGPEMRSTGEVMG+  SF  A+ KAQ+ AG++L  +G +FL
Sbjct: 882  YAVKEAVFPFIKFPGVDTILGPEMRSTGEVMGVGASFGEAYYKAQLGAGERLNPTGKIFL 941

Query: 1047 SLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVAN 1106
            S+ +  K  + + AK F  +G+ I +T GTA +L  +G+ V+ + K+ EGRPH GD + N
Sbjct: 942  SVREEDKERVIKTAKNFQVLGYGICATRGTAQYLTEQGLIVQTINKVPEGRPHIGDALKN 1001

Query: 1107 GQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRS 1156
            G+I ++V T S D     D   +R+  L  +VP  TT +G  A +E  +S
Sbjct: 1002 GEIALVVNTVSSDPQSVSDSHIIRQSALQQRVPQYTTTAGGEAMSEGAKS 1051


>gi|350553430|ref|ZP_08922605.1| carbamoyl-phosphate synthase, large subunit [Thiorhodospira sibirica
            ATCC 700588]
 gi|349790607|gb|EGZ44513.1| carbamoyl-phosphate synthase, large subunit [Thiorhodospira sibirica
            ATCC 700588]
          Length = 1073

 Score = 1249 bits (3231), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 624/1077 (57%), Positives = 801/1077 (74%), Gaps = 20/1077 (1%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KR D++ ILI+GAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRRDIQSILIIGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
              YI P+    V +++EKERPDA+LPTMGGQ ALN A+ LA  G L+ Y VELIGA  DA
Sbjct: 63   SIYIEPVEWRTVARIIEKERPDAVLPTMGGQVALNCALDLARHGVLDAYQVELIGATEDA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I  AEDR+ F+QAM  IG+++P + + NT +E  ++  EIG FP+IIRP+FT+GG+GGGI
Sbjct: 123  IDMAEDRERFRQAMTEIGLESPRAFMANTWEEAQAVQPEIG-FPVIIRPSFTMGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEFE I K GL  S T++V +E+S+LGWKE+E+EV+RD ADN +I+CSIEN+DPMG
Sbjct: 182  AYNREEFEEIVKRGLDLSPTNEVQIEESVLGWKEFEMEVVRDKADNCIIVCSIENLDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            +HTGDSITVAPAQTLTDKEYQ +R+ S+A++R+IGV+ GGSNVQFAVNP DG +++IEMN
Sbjct: 242  IHTGDSITVAPAQTLTDKEYQIMRNASLAVLRKIGVDTGGSNVQFAVNPQDGRLVIIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKK-TPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ N+IT   TPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGYTLDELRNEITGGITPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            F FEKFP ++P+LTTQMKSVGE MA+GR FQESFQKALR LE G  G     V   D + 
Sbjct: 362  FTFEKFPQAQPVLTTQMKSVGEVMAIGRCFQESFQKALRGLEIGVDGLD-EQVDFSDPEA 420

Query: 507  EQL-KYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQS 565
            E + +  L    P+R+  +  A++ G  +++I+EL+ ID+WFL Q  EL+ +E  L  + 
Sbjct: 421  ENMVRLELANTGPNRIFYVADALRLGYSIEQIYELTAIDRWFLAQLHELVVLENGLARKQ 480

Query: 566  VSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANT 625
            ++ + +  FY +K+RGFSDK++A    ++E +VR +R  LG+ P YKRVDTCAAEF + T
Sbjct: 481  LAELDQGSFYTLKQRGFSDKRLARLLGTSETQVRTRRHQLGIRPVYKRVDTCAAEFASTT 540

Query: 626  PYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNS 685
             Y+YS+YD ECE+ P+ + K+++LGGGPNRIGQGIEFDYCC H +F+++  G+ETIM+N 
Sbjct: 541  AYLYSTYDEECEATPSGRDKIMVLGGGPNRIGQGIEFDYCCVHAAFAMREDGFETIMVNC 600

Query: 686  NPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEH 745
            NPETVSTDYDTSDRLYFEPLT+EDVL ++ LE P+G+IVQ+GGQTPLKL+          
Sbjct: 601  NPETVSTDYDTSDRLYFEPLTLEDVLEIVALESPKGVIVQYGGQTPLKLA---------- 650

Query: 746  RLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEI 805
            R   A+G   V I GTSPDSID AEDRERF  +I+ L + QP    A+S  DA++ A +I
Sbjct: 651  RDLEANG---VPIIGTSPDSIDLAEDRERFQQLIERLGLVQPPNRTARSVDDAVSKAAQI 707

Query: 806  GYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALA 865
            GYPVVVRPSYVLGGRAMEIVY +E L  Y+ +AV+V  + PVL+D++L DA+E+DVDA+ 
Sbjct: 708  GYPVVVRPSYVLGGRAMEIVYNEEDLRRYMLHAVKVSNDAPVLLDRFLDDAVEVDVDAIC 767

Query: 866  DSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMN 925
            D    V+IGGIM+HIEQAGVHSGDSAC +P  +I+   L+ + +   ++A  L V GLMN
Sbjct: 768  DG-EQVLIGGIMQHIEQAGVHSGDSACSLPPYSIAEPLLEQLRAQVRQMALGLKVVGLMN 826

Query: 926  CQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPK 985
             Q+AI     +++LE NPRASRTVPFVSKAIG PLAK AA  M G SL+  G T+EV+P 
Sbjct: 827  TQFAIQGE-QIFVLEVNPRASRTVPFVSKAIGLPLAKIAARCMVGNSLSAQGVTREVVPP 885

Query: 986  HVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVF 1045
            + +VKEAV PF KF G D +LGPEM+STGEVMG+  SF  AFAK+Q+ AG  LP  G  F
Sbjct: 886  YYAVKEAVFPFIKFPGVDPILGPEMKSTGEVMGVGRSFAEAFAKSQLGAGMHLPTQGKAF 945

Query: 1046 LSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVA 1105
            +S+ D  K  +  +A+     GF++++T GTA  L   GIA   V K+ EGRPH  DM+ 
Sbjct: 946  ISVRDADKAGIIEVAQQLRAHGFELLATRGTAVVLSQAGIACTPVNKVLEGRPHIVDMIK 1005

Query: 1106 NGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTV 1162
            N +I +++ T+ G      D   +RR  L  KV   TT++GA A A+A+  L+   V
Sbjct: 1006 NDEISLIINTTEGRQAIA-DSFTIRREALQRKVSYTTTLAGASATAKALAYLEHGEV 1061


>gi|421862940|ref|ZP_16294642.1| unnamed protein product [Neisseria lactamica Y92-1009]
 gi|309379471|emb|CBX21837.1| unnamed protein product [Neisseria lactamica Y92-1009]
          Length = 1071

 Score = 1248 bits (3230), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 625/1070 (58%), Positives = 795/1070 (74%), Gaps = 22/1070 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTDL+ ILI+GAGPIVIGQACEFDYSG QACKAL+EEGY+VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDLKSILIIGAGPIVIGQACEFDYSGAQACKALREEGYKVILVNSNPATIMTDPEMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  + VE+++ KERPDA+LPTMGGQTALN A+ LA +G L KY VELIGA  DA
Sbjct: 63   VTYIEPIMWQTVEKIIAKERPDAILPTMGGQTALNCALDLARNGVLAKYNVELIGATEDA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  FK+AM+ IG+  P S + +T++E ++   ++G FP +IRP+FT+GG+GGGI
Sbjct: 123  IDKAEDRGRFKEAMEKIGLSCPKSFVCHTMNEALAAQEQVG-FPTLIRPSFTMGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYNK+EF AIC+ G  AS T ++L+E+S+LGWKEYE+EV+RD  DN +IICSIEN DPMG
Sbjct: 182  AYNKDEFLAICERGFDASPTHELLIEQSVLGWKEYEMEVVRDKNDNCIIICSIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGV+ GGSNVQFAVNP +GE++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQIMRNASLAVLREIGVDTGGSNVQFAVNPENGEMIVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VG++LD++ NDIT  KTPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGFTLDELRNDITGGKTPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            FAFEKFP ++  LTTQMKSVGE MA+GRT QESFQKALR LE G  G+   +      D 
Sbjct: 362  FAFEKFPAADDRLTTQMKSVGEVMAMGRTIQESFQKALRGLETGLCGFNPRS-----SDK 416

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
             +++  L  P P+RM  +  A + G  ++EIHE+  ID WFL Q ++L+  E+ +    +
Sbjct: 417  AEIRRELANPGPERMLFVADAFRAGFTLEEIHEICAIDPWFLAQIEDLVKEEKAVSDGIL 476

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
            S++       +KR+GFSDK+IA      EKEVRE R +L + P YKRVDTCAAEF   T 
Sbjct: 477  SDLDFAALRRLKRKGFSDKRIAQLLGIKEKEVREHRYALKLHPVYKRVDTCAAEFATETA 536

Query: 627  YMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSN 686
            Y+YS+Y+ ECE+ P+ +KKV+ILGGGPNRIGQGIEFDYCC H + +L+ +G+ETIM+N N
Sbjct: 537  YLYSTYEEECEARPSDRKKVMILGGGPNRIGQGIEFDYCCVHAALALRESGFETIMVNCN 596

Query: 687  PETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHR 746
            PETVSTD+DTSDRLYFEPLT+EDVL ++  E P G+IV +GGQTPLKL+  +        
Sbjct: 597  PETVSTDFDTSDRLYFEPLTLEDVLEIVRTENPWGVIVHYGGQTPLKLANAL-------- 648

Query: 747  LPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEIG 806
               A+G   V I GTS DSIDAAEDRERF  ++ +L + QP   IA +E +AL  A+EIG
Sbjct: 649  --VANG---VNIIGTSADSIDAAEDRERFQKVLNDLGLRQPPNRIAHNEEEALVKAEEIG 703

Query: 807  YPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALAD 866
            YP+VVRPSYVLGGRAM+IV++ E L  Y+  AV+V  + PVL+D +L++AIE+DVD ++D
Sbjct: 704  YPLVVRPSYVLGGRAMQIVHSTEALQKYMREAVQVSEDSPVLLDFFLNNAIEVDVDCVSD 763

Query: 867  SCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNC 926
               +VVIGGIM+H+EQAG+HSGDS C +P  ++S    D I   T  +A  L V GLMN 
Sbjct: 764  G-KDVVIGGIMQHVEQAGIHSGDSGCSLPPYSLSEEIQDEIRRQTKAMAYALGVIGLMNV 822

Query: 927  QYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPKH 986
            Q+A+   G V++LE NPRASRTVPFVSKA G PLAK  A  M+G SL + G  KEV+P  
Sbjct: 823  QFAV-QDGVVFVLEVNPRASRTVPFVSKATGVPLAKVGARCMAGISLKEQGVEKEVVPDF 881

Query: 987  VSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVFL 1046
             +VKEAV PF KF G D +LGPEMRSTGEVMG+  SF  A+ KAQ+ AG++L  +G +FL
Sbjct: 882  YAVKEAVFPFIKFPGVDTILGPEMRSTGEVMGVGASFGEAYYKAQLGAGERLNPTGKIFL 941

Query: 1047 SLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVAN 1106
            S+ +  K  + + AK F  +G+ I +T GTA +L   G+ V+ + K+ EGRPH GD + N
Sbjct: 942  SVREEDKERVIKTAKNFQVLGYGICATRGTAQYLTEHGLIVQTINKVPEGRPHIGDALKN 1001

Query: 1107 GQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRS 1156
            G+I ++V T S D     D   +R+  L  +VP  TT +G  A +E  +S
Sbjct: 1002 GEIALVVNTVSSDPQSVSDSHIIRQSALQQRVPQYTTTAGGEAMSEGAKS 1051


>gi|395445478|ref|YP_006385731.1| carbamoyl-phosphate synthase, large subunit [Pseudomonas putida ND6]
 gi|397693419|ref|YP_006531299.1| Carbamoyl-phosphate synthase large chain [Pseudomonas putida DOT-T1E]
 gi|388559475|gb|AFK68616.1| carbamoyl-phosphate synthase, large subunit [Pseudomonas putida ND6]
 gi|397330149|gb|AFO46508.1| Carbamoyl-phosphate synthase large chain [Pseudomonas putida DOT-T1E]
          Length = 1076

 Score = 1248 bits (3230), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 628/1089 (57%), Positives = 799/1089 (73%), Gaps = 30/1089 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILILGAGPIVIGQACEFDYSG QACKAL+EEG+ VIL+NSNPATIMTDP +AD
Sbjct: 6    KRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGFRVILVNSNPATIMTDPAMAD 65

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  + V +++EKERPDA+LPTMGGQTALN A+ L   G LEK+GVE+IGA  D 
Sbjct: 66   ATYIEPIKWQSVAKIIEKERPDAVLPTMGGQTALNCALDLERHGVLEKFGVEMIGANADT 125

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  F +AMK IG++ P SGI ++++E  ++  ++G FP IIRP+FT+GGTGGGI
Sbjct: 126  IDKAEDRSRFDKAMKDIGLECPRSGIAHSMEEANAVLEKLG-FPCIIRPSFTMGGTGGGI 184

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEFE IC  GL  S T ++L+++SL+GWKEYE+EV+RD  DN +I+CSIEN DPMG
Sbjct: 185  AYNREEFEEICTRGLDLSPTKELLIDESLIGWKEYEMEVVRDKKDNCIIVCSIENFDPMG 244

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGVE GGSNVQF + P  G ++VIEMN
Sbjct: 245  VHTGDSITVAPAQTLTDKEYQIMRNASLAVLREIGVETGGSNVQFGICPNTGRMVVIEMN 304

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL++GY+LD++ NDIT  +TPASFEPSIDYVVTK+PR
Sbjct: 305  PRVSRSSALASKATGFPIAKIAAKLAIGYTLDELQNDITGGRTPASFEPSIDYVVTKLPR 364

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            FAFEKFP ++  LTTQMKSVGE MA+GRTFQES QKALR LE G     C    ++D   
Sbjct: 365  FAFEKFPKADARLTTQMKSVGEVMAIGRTFQESLQKALRGLEVG----ACGLDPKVDLAS 420

Query: 507  EQ----LKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLL 562
             +    LK  L VP  +R+  +  AM+ GM  +EI  L+ ID WFL Q ++LI  E+ + 
Sbjct: 421  PEAASILKRELTVPGAERIWYVADAMRSGMTCEEIFNLTGIDMWFLVQMEDLIKEEEKVK 480

Query: 563  TQSVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFE 622
            T ++S + KD    +KR+GFSD+++A     T+K +R  R  L V P YKRVDTCAAEF 
Sbjct: 481  TLALSAIDKDYMLRLKRKGFSDQRLAVLLGITDKNLRRHRHKLEVFPVYKRVDTCAAEFA 540

Query: 623  ANTPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIM 682
             +T Y+YS+Y+ ECE+ P+ + K++ILGGGPNRIGQGIEFDYCC H + +L+  GYETIM
Sbjct: 541  TDTAYLYSTYEEECEANPSTRDKIMILGGGPNRIGQGIEFDYCCVHAALALRDDGYETIM 600

Query: 683  MNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYL 742
            +N NPETVSTDYDTSDRLYFEPLT+EDVL V  +E+P+G+IV +GGQTPLKL+    + L
Sbjct: 601  VNCNPETVSTDYDTSDRLYFEPLTLEDVLEVCRVEKPKGVIVHYGGQTPLKLA----RAL 656

Query: 743  DEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIA 802
            +E  +P         I GTSPD+ID AEDRERF  +++ L++ QP     +SE +A+  A
Sbjct: 657  EEAGVP---------IIGTSPDAIDRAEDRERFQQMVQRLNLLQPPNATVRSEEEAIRAA 707

Query: 803  KEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVD 862
              IGYP+VVRPSYVLGGRAMEIVY  + L  YL  AV+V  + PVL+D +L+ AIE+DVD
Sbjct: 708  GSIGYPLVVRPSYVLGGRAMEIVYELDELKRYLREAVQVSNDSPVLLDHFLNCAIEMDVD 767

Query: 863  ALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCG 922
            A+ D   +VVIG IM+HIEQAGVHSGDSAC +P  ++S    D +     K+A  L V G
Sbjct: 768  AVCDGT-DVVIGAIMQHIEQAGVHSGDSACSLPPYSLSKEVQDEVRVQVKKMALELGVVG 826

Query: 923  LMNCQYAITTSGD-VYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKE 981
            LMN Q A+   GD +Y++E NPRASRTVPFVSK IG  LA  AA VM+GK+L +LGFT+E
Sbjct: 827  LMNVQLAL--QGDKIYVIEVNPRASRTVPFVSKCIGTSLAMIAARVMAGKTLKELGFTQE 884

Query: 982  VIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLS 1041
            +IP   SVKEAV PF KF G D +LGPEM+STGEVMG+  SF  AFAKAQ+ A + LP  
Sbjct: 885  IIPNFYSVKEAVFPFAKFPGVDPILGPEMKSTGEVMGVGDSFGEAFAKAQMGASEVLPTG 944

Query: 1042 GTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAG 1101
            GT F+S+ D  KP +  +A+  + +GF++V+T+GTA  +E  G+ V RV K+ EGRPH  
Sbjct: 945  GTAFISVRDDDKPQVAGVARDLIALGFEVVATAGTAKVIEAAGLKVRRVNKVTEGRPHVV 1004

Query: 1102 DMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNT 1161
            DM+ N ++ +++ T+ G      D   +RR  L +K+   TT++   A  EA++     T
Sbjct: 1005 DMIKNDEVSLIINTTEGRQ-SIADSYSIRRNALQHKIYCTTTIAAGEAICEALKFGPEKT 1063

Query: 1162 VTMTALQDF 1170
            V    LQD 
Sbjct: 1064 VRR--LQDL 1070


>gi|296120606|ref|YP_003628384.1| carbamoyl-phosphate synthase large subunit [Planctomyces limnophilus
            DSM 3776]
 gi|296012946|gb|ADG66185.1| carbamoyl-phosphate synthase, large subunit [Planctomyces limnophilus
            DSM 3776]
          Length = 1090

 Score = 1248 bits (3230), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 627/1099 (57%), Positives = 810/1099 (73%), Gaps = 34/1099 (3%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            +R DL+KILI+G+GPIVIGQACEFDYSGTQACKAL+E GYEV+L+NSNPATIMTDP  AD
Sbjct: 3    RRDDLKKILIIGSGPIVIGQACEFDYSGTQACKALRECGYEVVLVNSNPATIMTDPNTAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  + V +++E ERPDA+LPT+GGQT LN  + L   G LEKY  E+IGA+ D 
Sbjct: 63   STYIEPIHWQYVAKIIENERPDAILPTLGGQTGLNTGMELFRRGILEKYNCEMIGARADV 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I+KAEDR LFK+AM+ IG+    S I N+++E   +  EIG  P+IIR +FTLGG GGGI
Sbjct: 123  IEKAEDRQLFKEAMQKIGLDVCRSRIVNSMEEARDVLKEIG-LPIIIRASFTLGGMGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEFE   + G+  S  ++VL+E+S++GWKEYE+EVMRD ADNVVIICSIEN+DPMG
Sbjct: 182  AYNREEFEEKVRKGIELSPINEVLLEESIIGWKEYEMEVMRDKADNVVIICSIENLDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTD+EYQR+RD +IA++REIGVE GGSNVQFA++P  G ++V+EMN
Sbjct: 242  VHTGDSITVAPAQTLTDREYQRMRDATIAVMREIGVETGGSNVQFAIHPQTGRMVVVEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRF 447
            PRVSRSSALASKATGFPIAK+AAKL+VG++LD+IPNDIT++T A FEP+IDYVVTK+PR+
Sbjct: 302  PRVSRSSALASKATGFPIAKIAAKLAVGFTLDEIPNDITRETLACFEPTIDYVVTKVPRW 361

Query: 448  AFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWD-- 505
             FEKFP ++P LT QMKSVGE MA+GRTF+ES QKALR LE G  G G    K+L WD  
Sbjct: 362  TFEKFPEADPELTVQMKSVGETMAIGRTFKESLQKALRGLEIGHFGLGGGK-KDL-WDSD 419

Query: 506  ----WEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFL 561
                 E+++  L  PN  R+  +  AMK G+   EIH+L+ ID WFL   ++++ +E  L
Sbjct: 420  HRPTIEEIEGKLATPNDMRIFYLRYAMKAGLSNSEIHDLTKIDPWFLENIRDIVRMEDRL 479

Query: 562  LTQSVSNMTKDDFY-EVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAE 620
                  +   D+   EVKR GFSDKQI      ++ EVR +R   G++P++K+VDTCAAE
Sbjct: 480  RCHERLDQVSDELLREVKRYGFSDKQIGDWLDVSDMEVRRERKRRGILPTFKQVDTCAAE 539

Query: 621  FEANTPYMYSSYDFECESAPTQ---KKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAG 677
            FEA TPY YS+Y+ E E+   +   +++V+ILGGGPNRIGQGIEFDYCCC  SF+L+  G
Sbjct: 540  FEAYTPYYYSTYESEDEAPGPRTDGRQRVIILGGGPNRIGQGIEFDYCCCQASFALRELG 599

Query: 678  YETIMMNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLP 737
             E++M+NSNPETVSTDYDTSD L+FEPLT EDVLN+ D  +P+G+IVQFGGQTPL L+  
Sbjct: 600  IESVMVNSNPETVSTDYDTSDLLFFEPLTTEDVLNICDRLQPDGVIVQFGGQTPLNLARG 659

Query: 738  IHQYLDEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEAD 797
            + Q               V+I GTSP  IDAAEDRE F  I+ +L + QP  G+A   A 
Sbjct: 660  LEQ-------------AGVKIIGTSPSMIDAAEDREIFKGILDKLGLHQPPNGMATDAAR 706

Query: 798  ALAIAKEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAI 857
            A+ IA EIGYPV+VRPS+VLGGRAM+I Y +  +  Y+  AV V P+RPVLIDK+L DA+
Sbjct: 707  AVQIASEIGYPVLVRPSFVLGGRAMQICYDERMVREYMTEAVNVSPDRPVLIDKFLEDAV 766

Query: 858  EIDVDALADSCGNV-VIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAK 916
            E+DVDA++D  G + V+GG+MEHIE+AGVHSGDSAC++P  ++  + +D I + T  LAK
Sbjct: 767  EVDVDAISD--GEITVVGGVMEHIEEAGVHSGDSACVLPPYSLPDAIVDEIKTATYALAK 824

Query: 917  RLNVCGLMNCQYAITTSGD---VYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSL 973
             L V GLMN Q+A+   G    VY+LE NPRASRT PFVSKA   PL K AA +M GK+L
Sbjct: 825  ELQVRGLMNIQFAVKHQGGEPVVYVLEVNPRASRTSPFVSKATNVPLPKLAAKIMVGKTL 884

Query: 974  NDLGFTKEVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIA 1033
             +LGFTKEV+P +VSVKE+V PF +F G D++LGPEM+STGEVMGID +FP A+A++Q+ 
Sbjct: 885  KELGFTKEVVPPYVSVKESVFPFTRFAGVDIILGPEMKSTGEVMGIDSTFPAAYARSQLG 944

Query: 1034 AGQKLPLSGTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKM 1093
            AG KLP SG VF+SL    K H+   A+  +D+GFKI++TSGT+  L   GI VE V K+
Sbjct: 945  AGNKLPSSGAVFISLAGRHKEHIISSARRLIDMGFKILATSGTSRVLREAGIEVETVRKL 1004

Query: 1094 HEGRPHAGDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEA 1153
             EGRP+  D +AN Q+Q++  T SG      +G ++R   +   +P +TT+ G +A  +A
Sbjct: 1005 QEGRPNLLDYMANNQVQLVFNTPSGKGARSDEG-RIRAAAVMNGIPCVTTLPGCIAVVQA 1063

Query: 1154 IRSLK-SNTVTMTALQDFF 1171
            + S++ S   ++T+LQ + 
Sbjct: 1064 LESIQESPEPSVTSLQQWI 1082


>gi|442611484|ref|ZP_21026190.1| Carbamoyl-phosphate synthase large chain [Pseudoalteromonas
            luteoviolacea B = ATCC 29581]
 gi|441747412|emb|CCQ12252.1| Carbamoyl-phosphate synthase large chain [Pseudoalteromonas
            luteoviolacea B = ATCC 29581]
          Length = 1072

 Score = 1248 bits (3230), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 621/1067 (58%), Positives = 789/1067 (73%), Gaps = 18/1067 (1%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KR DL+ ILILGAGPIVIGQACEFDYSG QACKALKEEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRNDLKSILILGAGPIVIGQACEFDYSGAQACKALKEEGYRVILVNSNPATIMTDPEMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  E+VE+++EKERP A+LPTMGGQTALN A+ L   G L K+GVELIGA  DA
Sbjct: 63   ATYIEPIHWEVVEKIIEKERPCAVLPTMGGQTALNCALDLDRHGVLAKHGVELIGATADA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAE+R+ F +AMK IG++ P + I +++++ + I   IG FP IIRP+FT+GGTGGG+
Sbjct: 123  IDKAENRERFDKAMKKIGLECPRAEIAHSMEDALDILTRIG-FPCIIRPSFTMGGTGGGV 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN EEFE IC  GL  S T ++L+++SL+GWKEYE+EV+RD  DN +I+CSIEN DPMG
Sbjct: 182  AYNMEEFEEICTRGLDLSPTKELLIDESLIGWKEYEMEVVRDKNDNCIIVCSIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGVE GGSNVQF VNPVDG +++IEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQLMRNASMAVLREIGVETGGSNVQFGVNPVDGRMVIIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT   TPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKIAAKLAVGYTLDELKNDITGGATPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            F FEKF GS   LTTQMKSVGE MA+GR  QES  KALR LE G +G+      +     
Sbjct: 362  FNFEKFAGSNDRLTTQMKSVGEVMAIGRNQQESLHKALRGLEVGATGFNPIVALDDPNAH 421

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
            E++ + LR P  +R+  +  AM+ GM +D++ EL+ ID+WFL Q ++++  E  +    +
Sbjct: 422  EKIVHELREPGAERIWYVADAMRHGMSIDDVFELTKIDRWFLVQIEDILKDEATIKEVGM 481

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
            + +T +   ++KR+GF+D +IA     +E E+R+KR  L ++P YKRVDTCAAEF+++T 
Sbjct: 482  AGLTAEFLRKLKRKGFADARIAEIAGVSETEIRKKRHMLNIVPVYKRVDTCAAEFKSDTA 541

Query: 627  YMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSN 686
            YMYSSYD ECE+ P++K K++++GGGPNRIGQGIEFDYCC H + +++  GYETIM+N N
Sbjct: 542  YMYSSYDEECEAQPSEKDKIMVIGGGPNRIGQGIEFDYCCVHAALAMREDGYETIMVNCN 601

Query: 687  PETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHR 746
            PETVSTDYDTSDRLYFEP+T+EDVL ++ +E+P+G+IVQ+GGQTPLKL+          R
Sbjct: 602  PETVSTDYDTSDRLYFEPITLEDVLEIVRVEKPKGVIVQYGGQTPLKLA----------R 651

Query: 747  LPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEIG 806
               A+G   V I GTSPD+ID AEDRERF  +++ L++ QP+     S  +A+  ++EIG
Sbjct: 652  ALEANG---VPIIGTSPDAIDRAEDRERFQHLVERLNLLQPENATVTSLEEAIVKSQEIG 708

Query: 807  YPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALAD 866
            +P+VVRPSYVLGGRAMEIVY ++ L  Y+  AV V  E PVL+D++L DAIE+DVDA+ D
Sbjct: 709  FPLVVRPSYVLGGRAMEIVYDEDDLRRYMTQAVSVSNEAPVLLDRFLDDAIEVDVDAICD 768

Query: 867  SCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNC 926
                V+IGGIMEHIEQAGVHSGDSAC +P  ++S    D + +    +A  L V GLMN 
Sbjct: 769  G-QEVLIGGIMEHIEQAGVHSGDSACSLPAYSLSQEIQDVMRNQVTAMALELGVVGLMNT 827

Query: 927  QYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPKH 986
            Q+A+   G VYL+E NPRA+RTVPFVSKA G  LAK AA  M G+SL   G TKEVIP +
Sbjct: 828  QFAV-KDGQVYLIEVNPRAARTVPFVSKATGVALAKVAARCMVGQSLQSQGITKEVIPPY 886

Query: 987  VSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVFL 1046
             SVKE VLPF KF G D + GPEMRSTGEVMG+  +F  AFAKAQ+ AG  LP  G   L
Sbjct: 887  YSVKEVVLPFAKFPGVDPMRGPEMRSTGEVMGVGDNFAEAFAKAQLGAGNTLPRGGRALL 946

Query: 1047 SLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVAN 1106
            S+ +  K  +  +AK    +GF++ +TSGTA  LE  GI V RV K++EGRPH  D + N
Sbjct: 947  SVRNGDKARVVELAKTMKALGFELDATSGTAAALEEAGIEVRRVNKVYEGRPHILDRIKN 1006

Query: 1107 GQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEA 1153
             +   +V T+ G    + D   LRR  L +K+   TT++ A AN +A
Sbjct: 1007 KEYSYIVNTTEGRQAIE-DSKVLRRGALQHKINYTTTLNAAFANCKA 1052


>gi|388467713|ref|ZP_10141923.1| carbamoyl-phosphate synthase, large subunit [Pseudomonas synxantha
            BG33R]
 gi|388011293|gb|EIK72480.1| carbamoyl-phosphate synthase, large subunit [Pseudomonas synxantha
            BG33R]
          Length = 1073

 Score = 1248 bits (3230), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 623/1088 (57%), Positives = 801/1088 (73%), Gaps = 28/1088 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILILGAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPAMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  + V +++EKERPDALLPTMGGQTALN A+ L   G LEK+GVE+IGA  D 
Sbjct: 63   ATYIEPIKWQTVAKIIEKERPDALLPTMGGQTALNCALDLEREGVLEKFGVEMIGANADT 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  F +AMK+IG+  P SGI ++++E  ++   +G FP IIRP+FT+GGTGGGI
Sbjct: 123  IDKAEDRSRFDKAMKSIGLACPRSGIAHSMEEANAVLETLG-FPCIIRPSFTMGGTGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEFE IC  GL  S T ++L+++SL+GWKEYE+EV+RD  DN +I+CSIEN DPMG
Sbjct: 182  AYNREEFEEICARGLDLSPTKELLIDESLIGWKEYEMEVVRDKKDNCIIVCSIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ LR+ S+A++REIGVE GGSNVQF + P  G ++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQILRNASLAVLREIGVETGGSNVQFGICPDTGRMVVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIA++AAKL++GY+LD++ N+IT    PASFEPSIDYVVTK+PR
Sbjct: 302  PRVSRSSALASKATGFPIARIAAKLAIGYTLDELQNEITGGAMPASFEPSIDYVVTKLPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            FAFEKF  ++  LTTQMKSVGE MA+GRTFQES QKALR LE G  G      ++LD   
Sbjct: 362  FAFEKFAKADARLTTQMKSVGEVMAIGRTFQESLQKALRGLEVGVCGLD----EKLDLSN 417

Query: 507  EQ----LKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLL 562
             +    LK  L VP  +R+  +  A + G+ V++I  ++ ID WFL Q ++LI  E+ + 
Sbjct: 418  PESMSILKRELTVPGAERIWYVADAFRAGLSVEDIFGMNMIDPWFLVQIEDLIKEEEKVK 477

Query: 563  TQSVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFE 622
            T  +S++ +D  + +KR+GFSD+++A     TEK +R  R  L + P YKRVDTCAAEF 
Sbjct: 478  TLGLSSIDRDLMFRLKRKGFSDQRLAKLLGVTEKNLRTHRHKLDIFPVYKRVDTCAAEFA 537

Query: 623  ANTPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIM 682
             +T YMYS+Y+ ECE+AP+ + K++ILGGGPNRIGQGIEFDYCC H + +L+  GYETIM
Sbjct: 538  TDTAYMYSTYEEECEAAPSDRDKIIILGGGPNRIGQGIEFDYCCVHAALALREDGYETIM 597

Query: 683  MNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYL 742
            +N NPETVSTDYDTSDRLYFEP+T+EDVL +  +E+P+G+IVQ+GGQTPLKL+       
Sbjct: 598  VNCNPETVSTDYDTSDRLYFEPVTLEDVLEICRVEKPKGVIVQYGGQTPLKLA------- 650

Query: 743  DEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIA 802
               R   A+G   V I GTSPD+ID AEDRERF  +++ L++ QP     +SE +A+  A
Sbjct: 651  ---RALEAAG---VPIIGTSPDAIDRAEDRERFQQMVERLNLRQPPNATVRSEDEAIRAA 704

Query: 803  KEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVD 862
             +IGYP+VVRPSYVLGGRAMEIVY ++ L  YL +AV+V  + PVL+D +L+ AIE+DVD
Sbjct: 705  SKIGYPLVVRPSYVLGGRAMEIVYEEDELKRYLRDAVKVSNDSPVLLDHFLNCAIEMDVD 764

Query: 863  ALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCG 922
            A+ D   +VVIG IM+HIEQAGVHSGDSAC +P  ++ +   D +     K+A  L V G
Sbjct: 765  AVCDGT-DVVIGAIMQHIEQAGVHSGDSACSLPPYSLPAHIQDEMREQVKKMALELGVVG 823

Query: 923  LMNCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEV 982
            LMN Q A+    D+Y++E NPRASRTVPFVSK IG  LA  AA VM+GK+L ++GFTKE+
Sbjct: 824  LMNVQLALQGE-DIYVIEVNPRASRTVPFVSKCIGVSLAMIAARVMAGKTLKEIGFTKEI 882

Query: 983  IPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSG 1042
            IP   SVKEAV PF KF G D +LGPEM+STGEVMG+  +F  AFAKAQ+ A + LP  G
Sbjct: 883  IPNFYSVKEAVFPFAKFPGVDPILGPEMKSTGEVMGVGDTFGEAFAKAQMGASEVLPTGG 942

Query: 1043 TVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGD 1102
            T F+S+ D  KP +  +A+  +++GF++V+T+GTA  +E  G+ V RV K+ EGRPH  D
Sbjct: 943  TAFISVRDDDKPLVAGVARDLINLGFEVVATAGTAKLIEAAGLKVRRVNKVTEGRPHVVD 1002

Query: 1103 MVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTV 1162
            M+ N ++ +++ T+ G      D   +RR  L +K+   TT++   A  EA++     TV
Sbjct: 1003 MIKNDEVTLIINTTEGRQ-SIADSYSIRRNALQHKIYCTTTIAAGEAICEALKFGPEKTV 1061

Query: 1163 TMTALQDF 1170
                LQD 
Sbjct: 1062 RR--LQDL 1067


>gi|24213427|ref|NP_710908.1| carbamoyl phosphate synthase large subunit [Leptospira interrogans
            serovar Lai str. 56601]
 gi|45658713|ref|YP_002799.1| carbamoyl phosphate synthase large subunit [Leptospira interrogans
            serovar Copenhageni str. Fiocruz L1-130]
 gi|386073063|ref|YP_005987380.1| carbamoyl phosphate synthase large subunit [Leptospira interrogans
            serovar Lai str. IPAV]
 gi|417760060|ref|ZP_12408088.1| carbamoyl-phosphate synthase, large subunit [Leptospira interrogans
            str. 2002000624]
 gi|417764252|ref|ZP_12412222.1| carbamoyl-phosphate synthase, large subunit [Leptospira interrogans
            serovar Bulgarica str. Mallika]
 gi|417775690|ref|ZP_12423541.1| carbamoyl-phosphate synthase, large subunit [Leptospira interrogans
            str. 2002000621]
 gi|417786779|ref|ZP_12434467.1| carbamoyl-phosphate synthase, large subunit [Leptospira interrogans
            str. C10069]
 gi|418669666|ref|ZP_13231045.1| carbamoyl-phosphate synthase, large subunit [Leptospira interrogans
            serovar Pyrogenes str. 2006006960]
 gi|418673790|ref|ZP_13235101.1| carbamoyl-phosphate synthase, large subunit [Leptospira interrogans
            str. 2002000623]
 gi|418690655|ref|ZP_13251763.1| carbamoyl-phosphate synthase, large subunit [Leptospira interrogans
            str. FPW2026]
 gi|418711268|ref|ZP_13272033.1| carbamoyl-phosphate synthase, large subunit [Leptospira interrogans
            serovar Grippotyphosa str. UI 08368]
 gi|418722442|ref|ZP_13281608.1| carbamoyl-phosphate synthase, large subunit [Leptospira interrogans
            str. UI 12621]
 gi|421083752|ref|ZP_15544623.1| carbamoyl-phosphate synthase, large subunit [Leptospira santarosai
            str. HAI1594]
 gi|421102060|ref|ZP_15562670.1| carbamoyl-phosphate synthase, large subunit [Leptospira interrogans
            serovar Icterohaemorrhagiae str. Verdun LP]
 gi|73917672|sp|Q72NF1.1|CARB_LEPIC RecName: Full=Carbamoyl-phosphate synthase large chain; AltName:
            Full=Carbamoyl-phosphate synthetase ammonia chain
 gi|73917673|sp|Q8F832.1|CARB_LEPIN RecName: Full=Carbamoyl-phosphate synthase large chain; AltName:
            Full=Carbamoyl-phosphate synthetase ammonia chain
 gi|24194193|gb|AAN47926.1| carbamoyl phosphate synthase large subunit [Leptospira interrogans
            serovar Lai str. 56601]
 gi|45601957|gb|AAS71436.1| carbamoyl-phosphate synthase large chain [Leptospira interrogans
            serovar Copenhageni str. Fiocruz L1-130]
 gi|353456852|gb|AER01397.1| carbamoyl phosphate synthase large subunit [Leptospira interrogans
            serovar Lai str. IPAV]
 gi|400353488|gb|EJP05657.1| carbamoyl-phosphate synthase, large subunit [Leptospira interrogans
            serovar Bulgarica str. Mallika]
 gi|400360155|gb|EJP16135.1| carbamoyl-phosphate synthase, large subunit [Leptospira interrogans
            str. FPW2026]
 gi|409944019|gb|EKN89608.1| carbamoyl-phosphate synthase, large subunit [Leptospira interrogans
            str. 2002000624]
 gi|409950054|gb|EKO04585.1| carbamoyl-phosphate synthase, large subunit [Leptospira interrogans
            str. C10069]
 gi|409963810|gb|EKO27532.1| carbamoyl-phosphate synthase, large subunit [Leptospira interrogans
            str. UI 12621]
 gi|410368205|gb|EKP23583.1| carbamoyl-phosphate synthase, large subunit [Leptospira interrogans
            serovar Icterohaemorrhagiae str. Verdun LP]
 gi|410433669|gb|EKP78009.1| carbamoyl-phosphate synthase, large subunit [Leptospira santarosai
            str. HAI1594]
 gi|410574564|gb|EKQ37595.1| carbamoyl-phosphate synthase, large subunit [Leptospira interrogans
            str. 2002000621]
 gi|410579068|gb|EKQ46918.1| carbamoyl-phosphate synthase, large subunit [Leptospira interrogans
            str. 2002000623]
 gi|410754597|gb|EKR16247.1| carbamoyl-phosphate synthase, large subunit [Leptospira interrogans
            serovar Pyrogenes str. 2006006960]
 gi|410768421|gb|EKR43669.1| carbamoyl-phosphate synthase, large subunit [Leptospira interrogans
            serovar Grippotyphosa str. UI 08368]
 gi|456824740|gb|EMF73166.1| carbamoyl-phosphate synthase, large subunit [Leptospira interrogans
            serovar Canicola str. LT1962]
 gi|456987979|gb|EMG23158.1| carbamoyl-phosphate synthase, large subunit [Leptospira interrogans
            serovar Copenhageni str. LT2050]
          Length = 1106

 Score = 1248 bits (3230), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 638/1119 (57%), Positives = 805/1119 (71%), Gaps = 58/1119 (5%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            +R D+R +LILG+GPIVIGQACEFDYSGTQA KALKE+G  VIL+NSNPATIMTDP LAD
Sbjct: 3    RREDIRSVLILGSGPIVIGQACEFDYSGTQAAKALKEKGIRVILLNSNPATIMTDPDLAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TY+ PMT  +V+++LEKE+PDA+LPT+GGQTALNLA+A   +G LEKY VELIGAK+DA
Sbjct: 63   ATYVEPMTVPVVQKILEKEKPDAILPTVGGQTALNLALACNSAGILEKYNVELIGAKVDA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            IKKAEDR+LFK+AM+ IGV+ P SG+ N L + + I N++G  PLI+RPAFTLGGTGGGI
Sbjct: 123  IKKAEDRELFKKAMEKIGVRVPASGLANNLKDAVEIKNKLG-LPLIVRPAFTLGGTGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AY +E FE +   GL AS  SQVL+E+S+LGWKE+ELEVMRDLADNVVIICSIEN+DPMG
Sbjct: 182  AYTEETFEEVVSKGLKASPISQVLLEESVLGWKEFELEVMRDLADNVVIICSIENIDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAP QTL+DKEYQ LRD SIAIIREIGVE GGSN+QFAVNP +G+V+VIEMN
Sbjct: 242  VHTGDSITVAPQQTLSDKEYQNLRDMSIAIIREIGVETGGSNIQFAVNPTNGDVIVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRF 447
            PRVSRSSALASKATGFPIAK+AA LS+GY+LD+I NDIT+ TPASFEPSIDYVVTK+PRF
Sbjct: 302  PRVSRSSALASKATGFPIAKIAALLSIGYTLDEIKNDITRVTPASFEPSIDYVVTKVPRF 361

Query: 448  AFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSN-VKEL---- 502
            AFEKFPG++  L  QMK+VGEAMA+GRTF+ESFQKALRSLE    G+G     +EL    
Sbjct: 362  AFEKFPGTDDTLGVQMKAVGEAMAIGRTFKESFQKALRSLEIDRYGFGSDGYFQELLYSR 421

Query: 503  ----DWDWEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVE 558
                D   E +   L+ PN  R+  +  A  +G  VD+IH+L  ID+WFL Q + L+ +E
Sbjct: 422  SLNNDQRKEWIDSHLKRPNDKRIFYVKLAFDEGYTVDQIHDLCKIDRWFLWQMEGLLKLE 481

Query: 559  QFLLTQSVSNMTKDDFYEVKRRGFSDKQIAFAT--------------------------K 592
                 +  S       Y++K+ GFS++Q++F                            K
Sbjct: 482  -----KEYSEKGNSILYKMKQVGFSNRQLSFLKNKKQILDLLDGNLRVDLKKTEIQNLLK 536

Query: 593  STEKEVREKRLSLGVIPSYKRVDTCAAEFEANTPYMYSSYDFECESAPTQKKKVLILGGG 652
             +E+E+  +  S  ++P YKR+DTCA EFEA TPY YSSYD E ES  T  K V+ILGGG
Sbjct: 537  LSEEEIEVELGSKKILPVYKRIDTCAGEFEAYTPYFYSSYDEEDESDVTNAKSVMILGGG 596

Query: 653  PNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSNPETVSTDYDTSDRLYFEPLTVEDVLN 712
            PNRIGQGIEFDYCCC  S++LQ  G E+IM+NSNPETVSTDYDTSDRLYFEPLT+EDV  
Sbjct: 597  PNRIGQGIEFDYCCCQASYALQDLGIESIMINSNPETVSTDYDTSDRLYFEPLTLEDVYR 656

Query: 713  VIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHRLPSASGDGLVRIWGTSPDSIDAAEDR 772
            +   E+PEG+I+QFGGQTPLKL+  + +           G   V+I GTSPDSID AEDR
Sbjct: 657  IYQNEKPEGVIIQFGGQTPLKLAKDLEK----------KG---VKILGTSPDSIDRAEDR 703

Query: 773  ERFNAIIKELSIEQPKGGIAKSEADALAIAKEIGYPVVVRPSYVLGGRAMEIVYTDETLV 832
            +RF  ++++L +  P+ GIA S  +A  IA +IGYPV+VRPSYVLGGRAM I+  ++ L 
Sbjct: 704  KRFVEVLEKLKLNSPESGIATSMEEAREIAHKIGYPVLVRPSYVLGGRAMLIINEEKELD 763

Query: 833  TYLENAVEVDPERPVLIDKYLSDAIEIDVDALADSCGNVVIGGIMEHIEQAGVHSGDSAC 892
             Y+E A E+  +RP+LID +L DAIE+DVDAL D    V + GIMEHIE+AG+HSGDSAC
Sbjct: 764  RYMEKAEEISKDRPLLIDSFLEDAIEVDVDALCDG-KEVFVTGIMEHIEEAGIHSGDSAC 822

Query: 893  MIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNCQYAITTSGDVYLLEANPRASRTVPFV 952
            ++P +T+S + +D I   T+ LA  L V GL+N QYA+     +Y++E NPRASRTVPFV
Sbjct: 823  VLPPQTLSKNMMDEIRKATVNLALELQVKGLINIQYAVKNE-ILYIIEVNPRASRTVPFV 881

Query: 953  SKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRS 1012
            SKA+GHP+ KYA  +M G+SL  L   KE+    VSVKE VLPF KF G D +LGPEMRS
Sbjct: 882  SKALGHPIVKYATRIMMGESLKSLPLPKEMEFSQVSVKEVVLPFNKFPGVDTILGPEMRS 941

Query: 1013 TGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVFLSLNDLTKPHLERIAKAFLDIGFKIVS 1072
            TGEVMGI  +   AF K+Q  AG +LP  GTVF+S+ND TK  L    K   ++GF +++
Sbjct: 942  TGEVMGIASTAGEAFLKSQYMAGDELPSQGTVFVSINDKTKAELLSYIKDLSELGFNLIA 1001

Query: 1073 TSGTAHFLELKGIAVERVLKMHEG-RPHAGDMVANGQIQMMVITSSGDSLDQIDGLKLRR 1131
            TSGT  FL   GI   ++ K+++G  P A D +   +I  ++I +    + + D   +R+
Sbjct: 1002 TSGTHKFLSDNGILSSKINKVYDGIFPTALDYIRENKIH-LIINTPLSRVTRDDSFTIRQ 1060

Query: 1132 RGLAYKVPVITTVSGALANAEAIRSLKSNTVTMTALQDF 1170
              + +KVP +TT + A A  + +  +K+   T+ +LQ+ 
Sbjct: 1061 AAIRFKVPCLTTSNAAKALIKGMVEMKNKGFTIHSLQEI 1099


>gi|385339401|ref|YP_005893273.1| carbamoyl-phosphate synthase large subunit [Neisseria meningitidis
            G2136]
 gi|416207773|ref|ZP_11621007.1| carbamoyl-phosphate synthase, large subunit [Neisseria meningitidis
            961-5945]
 gi|433467900|ref|ZP_20425349.1| carbamoyl-phosphate synthase, large subunit [Neisseria meningitidis
            87255]
 gi|325141608|gb|EGC64072.1| carbamoyl-phosphate synthase, large subunit [Neisseria meningitidis
            961-5945]
 gi|325197645|gb|ADY93101.1| carbamoyl-phosphate synthase, large subunit [Neisseria meningitidis
            G2136]
 gi|432201452|gb|ELK57533.1| carbamoyl-phosphate synthase, large subunit [Neisseria meningitidis
            87255]
          Length = 1071

 Score = 1248 bits (3230), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 623/1070 (58%), Positives = 793/1070 (74%), Gaps = 22/1070 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTDL+ ILI+GAGPIVIGQACEFDYSG QACKAL+EEGY+VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDLKSILIIGAGPIVIGQACEFDYSGAQACKALREEGYKVILVNSNPATIMTDPEMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  + VE+++ KERPDA+LPTMGGQTALN A+ LA +G L KY VELIGA  DA
Sbjct: 63   VTYIEPIMWQTVEKIIAKERPDAILPTMGGQTALNCALDLARNGVLAKYNVELIGATEDA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  FK+AM+ IG+  P S + +T++E ++   ++G FP +IRP+FT+GG+GGGI
Sbjct: 123  IDKAEDRGRFKEAMEKIGLSCPKSFVCHTMNEALAAQEQVG-FPTLIRPSFTMGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYNK+EF AIC+ G  AS T ++L+E+S+LGWKEYE+EV+RD  DN +IICSIEN DPMG
Sbjct: 182  AYNKDEFLAICERGFDASPTHELLIEQSVLGWKEYEMEVVRDKNDNCIIICSIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGV+ GGSNVQFAVNP +GE++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQIMRNASLAVLREIGVDTGGSNVQFAVNPENGEMIVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VG++LD++ NDIT  +TPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGFTLDELRNDITGGRTPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            FAFEKFP ++  LTTQMKSVGE MA+GRT QESFQKALR LE G  G+   +      D 
Sbjct: 362  FAFEKFPAADDRLTTQMKSVGEVMAMGRTIQESFQKALRGLETGLCGFNPRS-----EDK 416

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
             +++  L  P P+RM  +  A + G  ++EIHE+  ID WFL Q ++L+  E+ +    +
Sbjct: 417  AEIRRELANPGPERMLFVADAFRAGFTLEEIHEICAIDPWFLAQIEDLVKEEKAVSDGIL 476

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
            S++       +KR+GFSDK+IA      EKEVRE R  L + P YKRVDTCAAEF   T 
Sbjct: 477  SDLDFAALRRLKRKGFSDKRIAQLLGVKEKEVREHRYVLNLHPVYKRVDTCAAEFATETA 536

Query: 627  YMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSN 686
            Y+YS+Y+ ECE+ P+ +KKV+ILGGGPNRIGQGIEFDYCC H + +L+ +G+ETIM+N N
Sbjct: 537  YLYSTYEEECEARPSDRKKVMILGGGPNRIGQGIEFDYCCVHAALALRESGFETIMVNCN 596

Query: 687  PETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHR 746
            PETVSTD+DTSDRLYFEPLT+EDVL ++  E P G+IV +GGQTPLKL+           
Sbjct: 597  PETVSTDFDTSDRLYFEPLTLEDVLEIVRTENPWGVIVHYGGQTPLKLA----------- 645

Query: 747  LPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEIG 806
              +A  +  V I GTS DSIDAAEDRERF  ++ +L + QP   IA +E +AL  A+EIG
Sbjct: 646  --NALVENGVNIIGTSADSIDAAEDRERFQKVLNDLGLRQPPNRIAHNEEEALVKAEEIG 703

Query: 807  YPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALAD 866
            YP+VVRPSYVLGGRAM+IV++ E L  Y+  AV+V  + PVL+D +L++AIE+DVD ++D
Sbjct: 704  YPLVVRPSYVLGGRAMQIVHSAEQLQKYMREAVQVSEDSPVLLDFFLNNAIEVDVDCVSD 763

Query: 867  SCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNC 926
               +VVIGGIM+H+EQAG+HSGDS C +P  ++S    D I   T  +A  L V GLMN 
Sbjct: 764  G-KDVVIGGIMQHVEQAGIHSGDSGCSLPPYSLSEEIQDEIRRQTKAMAYALGVVGLMNV 822

Query: 927  QYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPKH 986
            Q+A+   G V++LE NPRASRTVPFVSKA G PLAK  A  M+G SL + G  KEV+P  
Sbjct: 823  QFAV-QDGVVFVLEVNPRASRTVPFVSKATGVPLAKVGARCMAGISLKEQGVEKEVVPDF 881

Query: 987  VSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVFL 1046
             +VKEAV PF KF G D +LGPEMRSTGEVMG+  SF  A+ KAQ+ AG++L  +G +FL
Sbjct: 882  YAVKEAVFPFIKFPGVDTILGPEMRSTGEVMGVGASFGEAYYKAQLGAGERLNPTGKIFL 941

Query: 1047 SLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVAN 1106
            S+ +  K  + + AK F  +G+ I +T GTA +L   G+ V+ + K+ EGRPH GD + N
Sbjct: 942  SVREEDKERVIKTAKNFQVLGYGICATRGTAQYLTEHGLIVQTINKVPEGRPHIGDALKN 1001

Query: 1107 GQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRS 1156
            G+I ++V T S D     D   +R+  L  +VP  TT +G  A +E  +S
Sbjct: 1002 GEIALVVNTVSSDPQSVSDSHIIRQSALQQRVPQYTTTAGGEAMSEGAKS 1051


>gi|268681334|ref|ZP_06148196.1| carbamoyl-phosphate synthase subunit large [Neisseria gonorrhoeae
            PID332]
 gi|268621618|gb|EEZ54018.1| carbamoyl-phosphate synthase subunit large [Neisseria gonorrhoeae
            PID332]
          Length = 1071

 Score = 1248 bits (3230), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 623/1070 (58%), Positives = 793/1070 (74%), Gaps = 22/1070 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTDL+ ILI+GAGPIVIGQACEFDYSG QACKAL+EEGY+VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDLKSILIIGAGPIVIGQACEFDYSGAQACKALREEGYKVILVNSNPATIMTDPEMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  + VE+++ KERPDA+LPTMGGQTALN A+ LA +G L KY VELIGA  DA
Sbjct: 63   VTYIEPIMWQTVEKIIAKERPDAILPTMGGQTALNCALDLARNGVLAKYNVELIGATEDA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  FK+AM+ IG+  P S + +T++E ++   ++G FP +IRP+FT+GG+GGGI
Sbjct: 123  IDKAEDRGRFKEAMEKIGLSCPKSFVCHTMNEALAAQEQVG-FPTLIRPSFTMGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYNK+EF AIC+ G  AS T ++L+E+S+LGWKEYE+EV+RD ADN +IICSIEN DPMG
Sbjct: 182  AYNKDEFLAICERGFDASPTHELLIEQSVLGWKEYEMEVVRDKADNCIIICSIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGV+ GGSNVQFAVNP +GE++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQIMRNASLAVLREIGVDTGGSNVQFAVNPENGEMIVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VG++LD++ NDIT  KTPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGFTLDELRNDITGGKTPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            FAFEKFP ++  LTTQMKSVGE MA+GRT QESFQKALR LE G  G+   +      D 
Sbjct: 362  FAFEKFPAADDRLTTQMKSVGEVMAMGRTIQESFQKALRGLETGLCGFNPRS-----EDK 416

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
             +++  L  P P+RM  +  A + G   +EIHE+  ID WFL Q ++L+  E+ +    +
Sbjct: 417  AEIRRELANPGPERMLFVADAFRAGFTPEEIHEICAIDPWFLAQIEDLMKEEKSVSDGQL 476

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
             ++       +KR+GFSDK++A     +EKEVRE R +L + P YKRVDTCAAEF   T 
Sbjct: 477  QDLDYAALRRLKRKGFSDKRLAQLLDVSEKEVREHRYALKLHPVYKRVDTCAAEFATETA 536

Query: 627  YMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSN 686
            Y+YS+Y+ ECES P+ +KKV+ILGGGPNRIGQGIEFDYCC H + +L+ +G+ETIM+N N
Sbjct: 537  YLYSTYEEECESRPSDRKKVMILGGGPNRIGQGIEFDYCCVHAALALRESGFETIMVNCN 596

Query: 687  PETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHR 746
            PETVSTD+DTSDRLYFEPLT+EDVL ++  E P G+IV +GGQTPLKL+           
Sbjct: 597  PETVSTDFDTSDRLYFEPLTLEDVLEIVRTENPWGVIVHYGGQTPLKLA----------- 645

Query: 747  LPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEIG 806
              +A  +  V I GTS DSIDAAEDRERF  ++ +L + QP   IA +E +AL  A+EIG
Sbjct: 646  --NALVENGVNIIGTSADSIDAAEDRERFQKVLNDLGLRQPPNRIAHNEEEALVKAEEIG 703

Query: 807  YPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALAD 866
            YP+VVRPSYVLGGRAM+IV++ E L  Y+  AV+V  + PVL+D +L++AIE+DVD ++D
Sbjct: 704  YPLVVRPSYVLGGRAMQIVHSAEALQKYMREAVQVSEDSPVLLDFFLNNAIEVDVDCVSD 763

Query: 867  SCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNC 926
               +VVIGGIM+H+EQAG+HSGDS C +P  ++S    D I   T  +A  L V GLMN 
Sbjct: 764  G-KDVVIGGIMQHVEQAGIHSGDSGCSLPPYSLSEEIQDEIRRQTKAMAYALGVVGLMNV 822

Query: 927  QYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPKH 986
            Q+A+   G V++LE NPRASRTVPFVSKA G PLAK  A  M+G SL + G  KEV+P  
Sbjct: 823  QFAV-QDGVVFVLEVNPRASRTVPFVSKATGVPLAKVGARCMAGISLKEQGVEKEVVPDF 881

Query: 987  VSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVFL 1046
             +VKEAV PF KF G D +L PEMRSTGEVMG+  SF  A+ KAQ+ AG++L  +G +FL
Sbjct: 882  YAVKEAVFPFIKFPGVDTILSPEMRSTGEVMGVGASFGEAYYKAQLGAGERLNPTGKIFL 941

Query: 1047 SLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVAN 1106
            S+ +  K  + + AK F  +G+ I +T GTA +L   G+ V+ + K+ EGRPH GD + N
Sbjct: 942  SVREEDKERVIKTAKNFQALGYGICATRGTAQYLTEHGLIVQAINKVPEGRPHIGDALKN 1001

Query: 1107 GQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRS 1156
            G+I ++V T S D     D   +R+  L  +VP  TT +G  A +E  +S
Sbjct: 1002 GEIALVVNTVSSDPQSVSDSHIIRQSALQQRVPQYTTTAGGEAMSEGAKS 1051


>gi|217970147|ref|YP_002355381.1| carbamoyl phosphate synthase large subunit [Thauera sp. MZ1T]
 gi|217507474|gb|ACK54485.1| carbamoyl-phosphate synthase, large subunit [Thauera sp. MZ1T]
          Length = 1076

 Score = 1248 bits (3229), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 635/1085 (58%), Positives = 813/1085 (74%), Gaps = 25/1085 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILI+GAGPI+IGQACEFDYSG QACKAL+EEGY+VIL+NSNPATIMTDP  AD
Sbjct: 3    KRTDIKTILIIGAGPIIIGQACEFDYSGAQACKALREEGYKVILVNSNPATIMTDPETAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+T ++VE++++KERPDA+LPTMGGQTALN A+ L   G L KYGVELIGA  +A
Sbjct: 63   VTYIEPITWQVVERIIDKERPDAILPTMGGQTALNCALDLGRHGVLAKYGVELIGASEEA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  FK AM  IG+ +  SGI ++++E + +   IG FP+IIRP+FTLGGTGGGI
Sbjct: 123  IDKAEDRLKFKDAMTRIGLGSARSGIAHSMEEALQVQGGIG-FPVIIRPSFTLGGTGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN EEF+ ICK GL AS T+++L+E+SLLGWKEYE+EV+RD ADN +I+CSIEN+DPMG
Sbjct: 182  AYNMEEFQEICKRGLEASPTNELLIEESLLGWKEYEMEVVRDRADNCIIVCSIENLDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ +R+ SIA++REIGV+ GGSNVQFA+NP DG ++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQIMRNASIAVLREIGVDTGGSNVQFAINPQDGRMIVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT   TPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGYTLDELRNDITGGATPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            FAFEKFP +   LTTQMKSVGE MA+GR+FQESFQKALR LE G  G     + E++ D 
Sbjct: 362  FAFEKFPQANDRLTTQMKSVGEVMAMGRSFQESFQKALRGLEVGVYG-----LDEVEADR 416

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
            E L++ +  P   R+  +  A ++GM ++++  LS ID WFL Q ++++  E+ L  +S+
Sbjct: 417  EDLEHEIASPGAQRIWYVGQAFREGMSLEQVFNLSKIDPWFLAQIEDIVLSEKALAGRSL 476

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
              +   +  E+K++GFSD+++A    + E  VR  R +LGV P +KRVDTCAAEF  +T 
Sbjct: 477  KALQAAELRELKKKGFSDRRLAKLLNADETAVRLHRHTLGVRPVFKRVDTCAAEFATSTA 536

Query: 627  YMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSN 686
            Y+YSSY+ ECE+ PT++KK+++LGGGPNRIGQGIEFDYCC H + +L+  GYETIM+N N
Sbjct: 537  YLYSSYEDECEAMPTERKKIMVLGGGPNRIGQGIEFDYCCVHAALALREDGYETIMVNCN 596

Query: 687  PETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHR 746
            PETVSTDYDTSDRLYFEP+T+ED+L ++ +E+P G+IVQFGGQTPLK +    Q L+ + 
Sbjct: 597  PETVSTDYDTSDRLYFEPITLEDLLEIVHIEKPVGVIVQFGGQTPLKRA----QALEANG 652

Query: 747  LPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEIG 806
            +P         I GTSPD IDAAEDRERF  ++ EL + QP    A++ A+A+ +A EIG
Sbjct: 653  VP---------IIGTSPDMIDAAEDRERFQQLLVELGLRQPPNRTARTPAEAVRLAAEIG 703

Query: 807  YPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALAD 866
            YP+VVRPSYVLGGRAMEIV+  + L  Y+  AV+V  E PVL+D++L+DA E+DVDAL+D
Sbjct: 704  YPLVVRPSYVLGGRAMEIVHEQKDLERYMREAVKVSNESPVLLDRFLNDATEVDVDALSD 763

Query: 867  SCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNC 926
                V+IGGIMEHIEQAGVHSGDSAC +P  T+S+   D +   T  +A+ L V GLMN 
Sbjct: 764  G-KQVMIGGIMEHIEQAGVHSGDSACSLPPYTLSARLQDELRRQTEAMARALKVVGLMNV 822

Query: 927  QYAITTSGD---VYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVI 983
            Q+AI   GD   VY+LE NPRASRTVPFVSKA   PLAK AA  M+G+SL + G + E++
Sbjct: 823  QFAIQGEGDNAVVYVLEVNPRASRTVPFVSKACSLPLAKIAARCMAGQSLAEQGVSGEIV 882

Query: 984  PKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGT 1043
            P + SVKEAV PF KF G D +LGPEM+STGEVMG+  SF  AF K+Q+ AG +LP +GT
Sbjct: 883  PPYYSVKEAVFPFVKFPGVDTILGPEMKSTGEVMGVGRSFAEAFVKSQMGAGVRLPTAGT 942

Query: 1044 VFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDM 1103
            VF+S+    KP    +A+   ++GF +V+T GTA  +E  GI V  V K++EGRPH  D+
Sbjct: 943  VFISVRPTDKPVAIEVARELHEMGFALVATRGTAAAIEAAGIPVGVVNKVNEGRPHIVDI 1002

Query: 1104 VANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTVT 1163
            + N +I +++ T         D   +R   LA KV + TT+ GA A    +R L SN + 
Sbjct: 1003 IKNEEIVLVINTVDEKRQAIADSRSIRTSALAAKVSIFTTIEGARAACMGMRHL-SNGLE 1061

Query: 1164 MTALQ 1168
            + ++Q
Sbjct: 1062 VYSVQ 1066



 Score =  243 bits (619), Expect = 7e-61,   Method: Compositional matrix adjust.
 Identities = 157/433 (36%), Positives = 236/433 (54%), Gaps = 30/433 (6%)

Query: 61  VRASSAKIDS-SAELSNGAA----SSKDQKLGKRTDLRKILILGAGPIVIGQACEFDYSG 115
           VR    ++D+ +AE +   A    S +D+     T+ +KI++LG GP  IGQ  EFDY  
Sbjct: 517 VRPVFKRVDTCAAEFATSTAYLYSSYEDECEAMPTERKKIMVLGGGPNRIGQGIEFDYCC 576

Query: 116 TQACKALKEEGYEVILINSNPATIMTDPGLADRTYITPMTPELVEQVLEKERPDALLPTM 175
             A  AL+E+GYE I++N NP T+ TD   +DR Y  P+T E + +++  E+P  ++   
Sbjct: 577 VHAALALREDGYETIMVNCNPETVSTDYDTSDRLYFEPITLEDLLEIVHIEKPVGVIVQF 636

Query: 176 GGQTALNLAVALAESGALEKYGVELIGAKLDAIKKAEDRDLFKQAMKTIGVKTPPSGIGN 235
           GGQT L  A       ALE  GV +IG   D I  AEDR+ F+Q +  +G++ PP+    
Sbjct: 637 GGQTPLKRA------QALEANGVPIIGTSPDMIDAAEDRERFQQLLVELGLRQPPNRTAR 690

Query: 236 TLDECISIANEIGEFPLIIRPAFTLGGTGGGIAYNKEEFEAICKAGLAASLTSQVLVEKS 295
           T  E + +A EIG +PL++RP++ LGG    I + +++ E   +  +  S  S VL+++ 
Sbjct: 691 TPAEAVRLAAEIG-YPLVVRPSYVLGGRAMEIVHEQKDLERYMREAVKVSNESPVLLDRF 749

Query: 296 LLGWKEYELEVMRDLADNVVIICSIENVDPMGVHTGDSITVAPAQTLTDKEYQRLRDYSI 355
           L    E +++ + D    V+I   +E+++  GVH+GDS    P  TL+ +    LR  + 
Sbjct: 750 LNDATEVDVDALSD-GKQVMIGGIMEHIEQAGVHSGDSACSLPPYTLSARLQDELRRQTE 808

Query: 356 AIIREIGVECGGSNVQFAVNPVDGE-----VMVIEMNPRVSRSSALASKATGFPIAKMAA 410
           A+ R + V  G  NVQFA+    GE     V V+E+NPR SR+    SKA   P+AK+AA
Sbjct: 809 AMARALKV-VGLMNVQFAIQ---GEGDNAVVYVLEVNPRASRTVPFVSKACSLPLAKIAA 864

Query: 411 KLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRFAFEKFPGSEPLLTTQMKSVGEAM 470
           +   G SL         +   S E    Y   K   F F KFPG + +L  +MKS GE M
Sbjct: 865 RCMAGQSL--------AEQGVSGEIVPPYYSVKEAVFPFVKFPGVDTILGPEMKSTGEVM 916

Query: 471 ALGRTFQESFQKA 483
            +GR+F E+F K+
Sbjct: 917 GVGRSFAEAFVKS 929


>gi|197106049|ref|YP_002131426.1| carbamoyl phosphate synthase large subunit [Phenylobacterium zucineum
            HLK1]
 gi|196479469|gb|ACG78997.1| carbamoyl-phosphate synthase, large subunit [Phenylobacterium
            zucineum HLK1]
          Length = 1096

 Score = 1248 bits (3229), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 625/1079 (57%), Positives = 778/1079 (72%), Gaps = 44/1079 (4%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD+  ILI+GAGPIVIGQACEFDYSG QACKAL+ EGY ++L+NSNPATIMTDP +AD
Sbjct: 3    KRTDISSILIIGAGPIVIGQACEFDYSGVQACKALRAEGYRIVLVNSNPATIMTDPEIAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+TPE+VE+++ KERPDALLPTMGGQTALN A+AL  +G L KYGVE+IGA+ D 
Sbjct: 63   ATYIEPITPEMVEKIIAKERPDALLPTMGGQTALNTALALERTGVLAKYGVEMIGARADV 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  F+ AM  IG+++P S + +TL+E ++   ++G  P IIRP+FTL GTGGGI
Sbjct: 123  IDKAEDRQKFRDAMDAIGLESPRSQVAHTLEEAMAGLEQVG-LPAIIRPSFTLAGTGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN EEF+ I + GL  S T++VL+E+S+LGWKEYE+EV+RD ADN +I+CSIENVDPMG
Sbjct: 182  AYNVEEFKEIVERGLDLSPTTEVLIEESVLGWKEYEMEVVRDRADNCIIVCSIENVDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPA TL DKEYQR+R  SIA++REIGVE GGSNVQFAVNP DG ++VIEMN
Sbjct: 242  VHTGDSITVAPALTLADKEYQRMRAASIAVLREIGVETGGSNVQFAVNPADGRMVVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRF 447
            PRVSRSSALASKATGFPIAK+AA+L+VGY+LD++ NDIT  TPASFEPSIDYVVTKIPRF
Sbjct: 302  PRVSRSSALASKATGFPIAKVAARLAVGYTLDELMNDITGATPASFEPSIDYVVTKIPRF 361

Query: 448  AFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGW---GCSNVKELDW 504
            AFEKFPGSEP LTTQMKSVGE MA+GRTF ES QKALR LE G +G       N  + + 
Sbjct: 362  AFEKFPGSEPYLTTQMKSVGEVMAIGRTFAESLQKALRGLETGLTGLDEIAIENADDPEM 421

Query: 505  DWEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQ 564
                +  +L  P PDR++ I  A + G+  DEI      + WFL Q + ++  E  +  +
Sbjct: 422  GHAAVVRALGTPTPDRLRVIAQAFRAGLTCDEIQAACSYEPWFLRQIETIVKEEARIAAE 481

Query: 565  SVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEAN 624
             +       F  +K  GFSD ++A  T  TEKEVRE+R +LGV P +KR+DTCA EF A+
Sbjct: 482  GLPT-DAAAFRRLKALGFSDARLAKLTHLTEKEVREQRRALGVRPVFKRIDTCAGEFRAD 540

Query: 625  TPYMYSSYDF-------ECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAG 677
            TPYMYS+Y+        +CES P+ +KK +ILGGGPNRIGQGIEFDYCCCH +F+L   G
Sbjct: 541  TPYMYSTYETGALGQIPDCESEPSDRKKAIILGGGPNRIGQGIEFDYCCCHAAFALDEIG 600

Query: 678  YETIMMNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPE----GIIVQFGGQTPLK 733
             E+IM+N NPETVSTDYDTSDRLYFEPLT EDVL +ID+ER      G+IVQFGGQTPLK
Sbjct: 601  VESIMVNCNPETVSTDYDTSDRLYFEPLTAEDVLELIDVERARGELLGVIVQFGGQTPLK 660

Query: 734  LSLPIHQYLDEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAK 793
            L+ P+              D  + I GTSPD+ID AEDRERF  ++ +L I QP   IA+
Sbjct: 661  LAQPLE-------------DAGIPILGTSPDAIDLAEDRERFQQLLHKLKIAQPVNAIAR 707

Query: 794  SEADALAIAKEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYL 853
            S  +A A   ++GYPVV+RPSYVLGGRAMEIV  DE L  Y+  AV+V  + PVLID+YL
Sbjct: 708  SREEAFAAVHKVGYPVVIRPSYVLGGRAMEIVRDDEQLERYITTAVQVSGDSPVLIDQYL 767

Query: 854  SDAIEIDVDALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIK 913
            S A E+DVDAL D  G V + G+MEHIE+AGVHSGDSAC +P  ++ +  +  +   T  
Sbjct: 768  SRATEVDVDALCDDAGQVFVAGVMEHIEEAGVHSGDSACSLPPYSLKAETIAELKRQTEA 827

Query: 914  LAKRLNVCGLMNCQYAITTSGD----VYLLEANPRASRTVPFVSKAIGHPLAKYAALVMS 969
            +A+ L+V GLMN Q+AI  +      +Y+LE NPRASRTVPFV+K IG PLA  AA VM+
Sbjct: 828  MARALSVRGLMNVQFAIEDAQGPEPRIYVLEVNPRASRTVPFVAKTIGRPLAAIAAKVMA 887

Query: 970  GKSLNDLGFTKEVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDM-------- 1021
            GK L D     +    HV+VKEAV PF +F G D +LGPEMRSTGEVMG+D         
Sbjct: 888  GKKLADFDLAVKDY-DHVAVKEAVFPFARFAGVDTVLGPEMRSTGEVMGLDWVRPGEDAG 946

Query: 1022 -SFPIAFAKAQIAAGQKLPLSGTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFL 1080
             +F  AFAK+Q+  G  LP +G VF+S+ D  KP +    K  L  GF++++TSGT+ FL
Sbjct: 947  PAFARAFAKSQLGGGTVLPKTGCVFVSVKDSDKPWIVEPVKIMLAQGFRVLATSGTSSFL 1006

Query: 1081 ELKGIAVERVLKMHEGRPHAGDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVP 1139
              +G+AVE V K+ EGRPH  D + NG++Q++  T+ G     +D  ++RR  L  K+P
Sbjct: 1007 AEQGLAVELVKKVLEGRPHIVDAMKNGEVQLVFNTTEGKQ-SLLDSFEIRRTALMGKIP 1064


>gi|298370199|ref|ZP_06981515.1| carbamoyl-phosphate synthase, large subunit [Neisseria sp. oral taxon
            014 str. F0314]
 gi|298281659|gb|EFI23148.1| carbamoyl-phosphate synthase, large subunit [Neisseria sp. oral taxon
            014 str. F0314]
          Length = 1071

 Score = 1248 bits (3229), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 622/1070 (58%), Positives = 795/1070 (74%), Gaps = 22/1070 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTDL+ ILI+GAGPIVIGQACEFDYSG QACKAL+EEGY+VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDLKSILIIGAGPIVIGQACEFDYSGAQACKALREEGYKVILVNSNPATIMTDPEMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  + VE+++ KERPDA+LPTMGGQTALN A+ LA +G L KY VELIGA  DA
Sbjct: 63   VTYIEPIMWQTVEKIIAKERPDAILPTMGGQTALNCALDLARNGVLAKYNVELIGATEDA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  FK+AM+ IG+  P S + +T++E ++   ++G FP +IRP+FT+GG+GGGI
Sbjct: 123  IDKAEDRGRFKEAMEKIGLSCPKSFVCHTMNEALAAQEQVG-FPTLIRPSFTMGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYNK+EF AIC+ G  AS T ++L+E+S+LGWKEYE+EV+RD  DN +IICSIEN DPMG
Sbjct: 182  AYNKDEFLAICERGFDASPTHELLIEQSVLGWKEYEMEVVRDKNDNCIIICSIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGV+ GGSNVQFAVNP +GE++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQIMRNASLAVLREIGVDTGGSNVQFAVNPENGEMIVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VG++LD++ NDIT  +TPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGFTLDELRNDITGGRTPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            FAFEKFP ++  LTTQMKSVGE MA+GRT QESFQKALR LE G  G+   +      D 
Sbjct: 362  FAFEKFPAADDRLTTQMKSVGEVMAMGRTIQESFQKALRGLETGLCGFNPRS-----EDK 416

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
             +++  L  P P+RM  +  A + G  ++EIHE+  ID WFL Q ++L+  EQ +    +
Sbjct: 417  AEIRRELANPGPERMLFVADAFRAGFTLEEIHEICAIDPWFLAQIEDLVKEEQQVSAGCL 476

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
             ++       +KR+GFSDK+IA      EKEVRE R +L + P YKRVDTCAAEF   T 
Sbjct: 477  QDLDFAALRRLKRKGFSDKRIAQLLGIKEKEVREHRYALNLHPVYKRVDTCAAEFATETA 536

Query: 627  YMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSN 686
            Y+YS+Y+ ECE+ P+ +KKV+ILGGGPNRIGQGIEFDYCC H + +L+ +G+ETIM+N N
Sbjct: 537  YLYSTYEEECEARPSDRKKVMILGGGPNRIGQGIEFDYCCVHAALALRESGFETIMVNCN 596

Query: 687  PETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHR 746
            PETVSTD+DTSDRLYFEPLT+EDVL ++  E P G+IV +GGQTPLKL+           
Sbjct: 597  PETVSTDFDTSDRLYFEPLTLEDVLEIVRTENPWGVIVHYGGQTPLKLA----------- 645

Query: 747  LPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEIG 806
              +A  +  V I GTS DSIDAAEDRERF  ++ +L + QP   IA +E +AL  A+EIG
Sbjct: 646  --NALVENGVNIIGTSADSIDAAEDRERFQKVLNDLGLRQPPNRIAHNEEEALVKAEEIG 703

Query: 807  YPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALAD 866
            YP+VVRPSYVLGGRAM++V++ E L  Y+  AV+V  + PVL+D +L++AIE+DVD ++D
Sbjct: 704  YPLVVRPSYVLGGRAMQVVHSAEELQKYMREAVQVSEDSPVLLDFFLNNAIEVDVDCVSD 763

Query: 867  SCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNC 926
               +VVIGGIM+H+EQAG+HSGDS C +P  ++S    D I   T  +A  L V GLMN 
Sbjct: 764  G-KDVVIGGIMQHVEQAGIHSGDSGCSLPPYSLSEEIQDEIRRQTKAMAYALGVVGLMNV 822

Query: 927  QYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPKH 986
            Q+A+   G V++LE NPRASRTVPFVSKA G PLAK  A  M+G SL + G  KEV+P  
Sbjct: 823  QFAV-QDGVVFVLEVNPRASRTVPFVSKATGVPLAKVGARCMAGISLQEQGVEKEVVPDF 881

Query: 987  VSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVFL 1046
             +VKEAV PF KF G D +LGPEMRSTGEVMG+  SF  A+ KAQ+ AG++L  +G +FL
Sbjct: 882  YAVKEAVFPFIKFPGVDTILGPEMRSTGEVMGVGASFGEAYYKAQLGAGERLNPTGKIFL 941

Query: 1047 SLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVAN 1106
            ++ D  KP + + A+ F  +G+ + +T GTA +L+  GI V+ V K+ EGRPH  D + N
Sbjct: 942  AVRDEDKPLIVKTAQNFQALGYGVCATRGTAEYLKEHGIIVQAVNKVQEGRPHIVDAIKN 1001

Query: 1107 GQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRS 1156
            G+I ++V T S  +    D   +RR  L  +VP  TT++G  A +E  +S
Sbjct: 1002 GEIALVVNTVSSSAQSISDSHSIRRTSLTQRVPQYTTIAGGEAMSEGAKS 1051


>gi|451936268|ref|YP_007460122.1| carbamoyl-phosphate synthase large subunit [Candidatus
            Kinetoplastibacterium oncopeltii TCC290E]
 gi|451777191|gb|AGF48166.1| carbamoyl-phosphate synthase large subunit [Candidatus
            Kinetoplastibacterium oncopeltii TCC290E]
          Length = 1079

 Score = 1248 bits (3228), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 639/1091 (58%), Positives = 813/1091 (74%), Gaps = 28/1091 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILI+GAGPI+IGQACEFDYSG QACKALK EGY  IL+NSNPATIMTDP  AD
Sbjct: 3    KRTDIKSILIIGAGPIIIGQACEFDYSGAQACKALKSEGYRTILVNSNPATIMTDPETAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  + VE+++EKE+PDALLPTMGGQTALN A+ L + G L+K+ +ELIGA   A
Sbjct: 63   VTYIEPIIWQAVEKIIEKEKPDALLPTMGGQTALNCALDLVQHGVLDKHNIELIGANAHA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGE------FPLIIRPAFTLG 261
            I+KAEDR  FKQAM  IG+ +  SG+ ++++E  S+  +I        FP++IRP+FT+G
Sbjct: 123  IEKAEDRQKFKQAMTDIGLDSAKSGLAHSMEEAWSVQKDIASYNESFGFPVVIRPSFTMG 182

Query: 262  GTGGGIAYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIE 321
            G+GGGIAYN +EFE ICK GL AS TS++L+E+SLLGWKE+E+EV+RD ADN +I+CSIE
Sbjct: 183  GSGGGIAYNSDEFEDICKRGLEASPTSELLIEESLLGWKEFEMEVIRDKADNCIIVCSIE 242

Query: 322  NVDPMGVHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEV 381
            N+DPMGVHTGDSITVAPAQTLTDKEYQ +R+ SIA++REIGV+ GGSNVQFAVNP +G +
Sbjct: 243  NLDPMGVHTGDSITVAPAQTLTDKEYQIMRNASIAVLREIGVDTGGSNVQFAVNPDNGRM 302

Query: 382  MVIEMNPRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKK-TPASFEPSIDYV 440
            +VIEMNPRVSRSSALASKATGFPIAK+AA L+VG++LD++ NDIT K TPASFEPSIDYV
Sbjct: 303  VVIEMNPRVSRSSALASKATGFPIAKVAALLAVGFTLDELKNDITGKLTPASFEPSIDYV 362

Query: 441  VTKIPRFAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVK 500
            VTK+PRFAFEKFP ++  LTTQMKSVGE MA+GRTFQESFQKALR LE G  G    N K
Sbjct: 363  VTKVPRFAFEKFPTADSRLTTQMKSVGEVMAIGRTFQESFQKALRGLEVGVDGL---NQK 419

Query: 501  ELDWDWEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQF 560
             LD   E L+  L  P P+R+  +  A  K   +DE+H ++ ID WFL+Q KE++D+E  
Sbjct: 420  TLDR--ETLQVELGAPGPERIWYVGDAFAKKFTIDEVHAITKIDVWFLSQIKEIVDIELA 477

Query: 561  LLTQSVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAE 620
            L  +++S++  +   E+KR GFSD ++AF   S+E EVR+ R SL + P YKRVDTCAAE
Sbjct: 478  LEKKTLSDIDYNTLLELKRHGFSDARLAFLLDSSELEVRKLRHSLNIRPVYKRVDTCAAE 537

Query: 621  FEANTPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYET 680
            F  NT YMYS+Y+ ECES P+ KKK++ILGGGPNRIGQGIEFDYCC H S +L+  GYET
Sbjct: 538  FPTNTAYMYSTYEEECESNPSNKKKIIILGGGPNRIGQGIEFDYCCVHASIALREHGYET 597

Query: 681  IMMNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQ 740
            IM+N NPETVSTDYDTSDRLYFEPLT+EDVL ++  E P G IVQ+GGQTPLKL+     
Sbjct: 598  IMINCNPETVSTDYDTSDRLYFEPLTLEDVLEIVHKENPVGTIVQYGGQTPLKLA----- 652

Query: 741  YLDEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALA 800
                 R   A+G   V I GTSP+SID AEDRERF  ++ ++ + QP    A++E +AL+
Sbjct: 653  -----RALEANG---VPIIGTSPESIDIAEDRERFQKLLAKIGLRQPSNRTARTELEALS 704

Query: 801  IAKEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEID 860
            +A EIGYP+VVRPSYVLGGRAMEIV+  + L  Y+  AV+V  + PVL+D +L++A EID
Sbjct: 705  LASEIGYPLVVRPSYVLGGRAMEIVHEQKDLERYMREAVKVSNDSPVLLDSFLNNATEID 764

Query: 861  VDALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNV 920
            VD L+D   +V +GG+MEHIEQAGVHSGDSAC IP  ++S++ +D I   T  +AK LNV
Sbjct: 765  VDCLSDG-EDVFVGGVMEHIEQAGVHSGDSACSIPPYSLSANIVDEIKRQTRLIAKSLNV 823

Query: 921  CGLMNCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTK 980
             GLMN Q+A+   GD+Y+LE NPRASRT+P+VSKA G  LAK AALVMSG +L+    T+
Sbjct: 824  RGLMNTQFAV-QDGDIYVLEVNPRASRTIPYVSKATGLQLAKIAALVMSGLNLSSQNITE 882

Query: 981  EVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPL 1040
            +V   +  VKEAV PF KF G D +LGPEM+STGEVMGI  +F  AF KAQ+ AG  LP 
Sbjct: 883  DVKSSYFFVKEAVFPFIKFPGVDTILGPEMKSTGEVMGIGKTFAEAFVKAQLGAGVNLPE 942

Query: 1041 SGTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHA 1100
            +GTVF+S+ D  K     +AK    +GF +V+T GTA  L   G+ V +V K++EGRPH 
Sbjct: 943  TGTVFISVKDQDKLSAIEVAKGLQSLGFHLVATRGTAAKLISAGVKVRKVNKVNEGRPHI 1002

Query: 1101 GDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSN 1160
             DM+ NG+I +++ T        +D   +R + LA +V   TT++GA A  + ++ L++ 
Sbjct: 1003 VDMMRNGEIALVINTVEERRNAIVDSKTIRVQALANRVVCFTTIAGARAAVDGMQYLRNK 1062

Query: 1161 T-VTMTALQDF 1170
              + + +LQD 
Sbjct: 1063 EGLKVYSLQDI 1073


>gi|268596082|ref|ZP_06130249.1| carbamoyl phosphate synthase large subunit [Neisseria gonorrhoeae
            FA19]
 gi|268549870|gb|EEZ44889.1| carbamoyl phosphate synthase large subunit [Neisseria gonorrhoeae
            FA19]
          Length = 1071

 Score = 1248 bits (3228), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 622/1070 (58%), Positives = 793/1070 (74%), Gaps = 22/1070 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTDL+ ILI+GAGPIVIGQACEFDYSG QACKAL+EEGY+VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDLKSILIIGAGPIVIGQACEFDYSGAQACKALREEGYKVILVNSNPATIMTDPEMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  + VE+++ KERPDA+LPTMGGQTALN A+ LA +G L KY VELIGA  DA
Sbjct: 63   VTYIEPIMWQTVEKIIAKERPDAILPTMGGQTALNCALDLARNGVLAKYNVELIGATEDA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  FK+AM+ IG+  P S + +T++E ++   ++G FP +IRP+FT+GG+GGGI
Sbjct: 123  IDKAEDRGRFKEAMEKIGLSCPKSFVCHTMNEALAAQEQVG-FPTLIRPSFTMGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYNK+EF AIC+ G  AS T ++L+E+S+LGWKEYE+EV+RD ADN +IICSIEN DPMG
Sbjct: 182  AYNKDEFLAICERGFDASPTHELLIEQSVLGWKEYEMEVVRDKADNCIIICSIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGV+ GGSNVQFAVNP +GE++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQIMRNASLAVLREIGVDTGGSNVQFAVNPENGEMIVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VG++LD++ NDIT  +TPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGFTLDELRNDITGGRTPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            FAFEKFP ++  LTTQMKSVGE MA+GRT QESFQKALR LE G  G+   +      D 
Sbjct: 362  FAFEKFPAADDRLTTQMKSVGEVMAMGRTIQESFQKALRGLETGLCGFNPRS-----EDK 416

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
             +++  L  P P+RM  +  A + G   +EIHE+  ID WFL Q ++L+  E+ +    +
Sbjct: 417  AEIRRELANPGPERMLFVADAFRAGFTPEEIHEICAIDPWFLAQIEDLMKEEKSVSDGQL 476

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
             ++       +KR+GFSDK++A     +EKEVRE R +L + P YKRVDTCAAEF   T 
Sbjct: 477  QDLDYAALRRLKRKGFSDKRLAQLLNVSEKEVREHRYALKLHPVYKRVDTCAAEFATETA 536

Query: 627  YMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSN 686
            Y+YS+Y+ ECES P+ +KKV+ILGGGPNRIGQGIEFDYCC H + +L+ +G+ETIM+N N
Sbjct: 537  YLYSTYEEECESRPSDRKKVMILGGGPNRIGQGIEFDYCCVHAALALRESGFETIMVNCN 596

Query: 687  PETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHR 746
            PETVSTD+DTSDRLYFEPLT+EDVL ++  E P G+IV +GGQTPLKL+           
Sbjct: 597  PETVSTDFDTSDRLYFEPLTLEDVLEIVRTENPWGVIVHYGGQTPLKLA----------- 645

Query: 747  LPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEIG 806
              +A  +  V I GTS DSIDAAEDRERF  ++ +L + QP   IA +E +AL  A+EIG
Sbjct: 646  --NALVENGVNIIGTSADSIDAAEDRERFQKVLNDLGLRQPPNRIAHNEEEALVKAEEIG 703

Query: 807  YPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALAD 866
            YP+VVRPSYVLGGRAM+IV++ E L  Y+  AV+V  + PVL+D +L++AIE+DVD ++D
Sbjct: 704  YPLVVRPSYVLGGRAMQIVHSAEQLQKYMREAVQVSEDSPVLLDFFLNNAIEVDVDCVSD 763

Query: 867  SCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNC 926
               +VVIGGIM+H+EQAG+HSGDS C +P  ++S    D I   T  +A  L V GLMN 
Sbjct: 764  G-KDVVIGGIMQHVEQAGIHSGDSGCSLPPYSLSEEIQDEIRRQTKAMAYALGVVGLMNV 822

Query: 927  QYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPKH 986
            Q+A+   G V++LE NPRASRTVPFVSKA G PLAK  A  M+G SL + G  KEV+P  
Sbjct: 823  QFAV-QDGVVFVLEVNPRASRTVPFVSKATGVPLAKVGARCMAGISLKEQGVEKEVVPDF 881

Query: 987  VSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVFL 1046
             +VKEAV PF KF G D +L PEMRSTGEVMG+  SF  A+ KAQ+ AG++L  +G +FL
Sbjct: 882  YAVKEAVFPFIKFPGVDTILSPEMRSTGEVMGVGASFGEAYYKAQLGAGERLNPTGKIFL 941

Query: 1047 SLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVAN 1106
            S+ +  K  + + AK F  +G+ I +T GTA +L   G+ V+ + K+ EGRPH GD + N
Sbjct: 942  SVREEDKERVIKTAKNFQALGYGICATRGTAQYLTEHGLIVQAINKVPEGRPHIGDALKN 1001

Query: 1107 GQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRS 1156
            G+I ++V T S D     D   +R+  L  +VP  TT +G  A +E  +S
Sbjct: 1002 GEIALVVNTVSSDPQSVSDSHIIRQSALQQRVPQYTTTAGGEAMSEGAKS 1051


>gi|421523911|ref|ZP_15970538.1| carbamoyl phosphate synthase large subunit [Pseudomonas putida LS46]
 gi|402752156|gb|EJX12663.1| carbamoyl phosphate synthase large subunit [Pseudomonas putida LS46]
          Length = 1073

 Score = 1248 bits (3228), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 628/1089 (57%), Positives = 799/1089 (73%), Gaps = 30/1089 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILILGAGPIVIGQACEFDYSG QACKAL+EEG+ VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGFRVILVNSNPATIMTDPAMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  + V +++EKERPDA+LPTMGGQTALN A+ L   G LEK+GVE+IGA  D 
Sbjct: 63   ATYIEPIKWQSVAKIIEKERPDAVLPTMGGQTALNCALDLERHGVLEKFGVEMIGANADT 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  F +AMK IG++ P SGI ++++E  ++  ++G FP IIRP+FT+GGTGGGI
Sbjct: 123  IDKAEDRSRFDKAMKDIGLECPRSGIAHSMEEANAVLEKLG-FPCIIRPSFTMGGTGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEFE IC  GL  S T ++L+++SL+GWKEYE+EV+RD  DN +I+CSIEN DPMG
Sbjct: 182  AYNREEFEEICTRGLDLSPTKELLIDESLIGWKEYEMEVVRDKKDNCIIVCSIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGVE GGSNVQF + P  G ++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQIMRNASLAVLREIGVETGGSNVQFGICPNTGRMVVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL++GY+LD++ NDIT  +TPASFEPSIDYVVTK+PR
Sbjct: 302  PRVSRSSALASKATGFPIAKIAAKLAIGYTLDELQNDITGGRTPASFEPSIDYVVTKLPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            FAFEKFP ++  LTTQMKSVGE MA+GRTFQES QKALR LE G     C    ++D   
Sbjct: 362  FAFEKFPKADARLTTQMKSVGEVMAIGRTFQESLQKALRGLEVG----ACGLDPKVDLAS 417

Query: 507  EQ----LKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLL 562
             +    LK  L VP  +R+  +  AM+ GM  +EI  L+ ID WFL Q ++LI  E+ + 
Sbjct: 418  PEAASILKRELTVPGAERIWYVADAMRSGMTCEEIFNLTGIDMWFLVQMEDLIKEEEKVK 477

Query: 563  TQSVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFE 622
            T ++S + KD    +KR+GFSD+++A     T+K +R  R  L V P YKRVDTCAAEF 
Sbjct: 478  TLALSAIDKDYMLRLKRKGFSDQRLAVLLGITDKNLRRHRHKLEVFPVYKRVDTCAAEFA 537

Query: 623  ANTPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIM 682
             +T Y+YS+Y+ ECE+ P+ + K++ILGGGPNRIGQGIEFDYCC H + +L+  GYETIM
Sbjct: 538  TDTAYLYSTYEEECEANPSTRDKIMILGGGPNRIGQGIEFDYCCVHAALALRDDGYETIM 597

Query: 683  MNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYL 742
            +N NPETVSTDYDTSDRLYFEPLT+EDVL V  +E+P+G+IV +GGQTPLKL+    + L
Sbjct: 598  VNCNPETVSTDYDTSDRLYFEPLTLEDVLEVCRVEKPKGVIVHYGGQTPLKLA----RAL 653

Query: 743  DEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIA 802
            +E  +P         I GTSPD+ID AEDRERF  +++ L++ QP     +SE +A+  A
Sbjct: 654  EEAGVP---------IIGTSPDAIDRAEDRERFQQMVQRLNLLQPPNATVRSEEEAIRAA 704

Query: 803  KEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVD 862
              IGYP+VVRPSYVLGGRAMEIVY  + L  YL  AV+V  + PVL+D +L+ AIE+DVD
Sbjct: 705  GSIGYPLVVRPSYVLGGRAMEIVYELDELKRYLREAVQVSNDSPVLLDHFLNCAIEMDVD 764

Query: 863  ALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCG 922
            A+ D   +VVIG IM+HIEQAGVHSGDSAC +P  ++S    D +     K+A  L V G
Sbjct: 765  AVCDGT-DVVIGAIMQHIEQAGVHSGDSACSLPPYSLSKEVQDEVRVQVKKMALELGVVG 823

Query: 923  LMNCQYAITTSGD-VYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKE 981
            LMN Q A+   GD +Y++E NPRASRTVPFVSK IG  LA  AA VM+GK+L +LGFT+E
Sbjct: 824  LMNVQLAL--QGDKIYVIEVNPRASRTVPFVSKCIGTSLAMIAARVMAGKTLKELGFTQE 881

Query: 982  VIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLS 1041
            +IP   SVKEAV PF KF G D +LGPEM+STGEVMG+  SF  AFAKAQ+ A + LP  
Sbjct: 882  IIPNFYSVKEAVFPFAKFPGVDPILGPEMKSTGEVMGVGDSFGEAFAKAQMGASEVLPTG 941

Query: 1042 GTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAG 1101
            GT F+S+ D  KP +  +A+  + +GF++V+T+GTA  +E  G+ V RV K+ EGRPH  
Sbjct: 942  GTAFISVRDDDKPQVAGVARDLIALGFEVVATAGTAKVIEAAGLKVRRVNKVTEGRPHVV 1001

Query: 1102 DMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNT 1161
            DM+ N ++ +++ T+ G      D   +RR  L +K+   TT++   A  EA++     T
Sbjct: 1002 DMIKNDEVSLIINTTEGRQ-SIADSYSIRRNALQHKIYCTTTIAAGEAICEALKFGPEKT 1060

Query: 1162 VTMTALQDF 1170
            V    LQD 
Sbjct: 1061 VRR--LQDL 1067


>gi|167035715|ref|YP_001670946.1| carbamoyl phosphate synthase large subunit [Pseudomonas putida GB-1]
 gi|166862203|gb|ABZ00611.1| carbamoyl-phosphate synthase, large subunit [Pseudomonas putida GB-1]
          Length = 1073

 Score = 1248 bits (3228), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 629/1089 (57%), Positives = 799/1089 (73%), Gaps = 30/1089 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILILGAGPIVIGQACEFDYSG QACKAL+EEG+ VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGFRVILVNSNPATIMTDPAMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  + V +++EKERPDA+LPTMGGQTALN A+ L   G LEK+GVE+IGA  D 
Sbjct: 63   ATYIEPIKWQSVAKIIEKERPDAVLPTMGGQTALNCALDLERHGVLEKFGVEMIGANADT 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  F +AMK IG++ P SGI ++++E  ++  ++G FP IIRP+FT+GGTGGGI
Sbjct: 123  IDKAEDRSRFDKAMKDIGLECPRSGIAHSMEEANAVLEKLG-FPCIIRPSFTMGGTGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEFE IC  GL  S T ++L+++SL+GWKEYE+EV+RD  DN +I+CSIEN DPMG
Sbjct: 182  AYNREEFEEICTRGLDLSPTKELLIDESLIGWKEYEMEVVRDKKDNCIIVCSIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGVE GGSNVQF + P  G ++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQIMRNASLAVLREIGVETGGSNVQFGICPNTGRMVVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL++GY+LD++ NDIT  +TPASFEPSIDYVVTK+PR
Sbjct: 302  PRVSRSSALASKATGFPIAKIAAKLAIGYTLDELQNDITGGRTPASFEPSIDYVVTKLPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            FAFEKFP ++  LTTQMKSVGE MA+GRTFQES QKALR LE G     C    ++D   
Sbjct: 362  FAFEKFPKADARLTTQMKSVGEVMAIGRTFQESLQKALRGLEVG----ACGLDPKVDLAS 417

Query: 507  EQ----LKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLL 562
             +    LK  L VP  +R+  +  AM+ GM  +EI  L+ ID WFL Q ++LI  E+ + 
Sbjct: 418  PEAASILKRELTVPGAERIWYVADAMRSGMTCEEIFALTGIDMWFLVQMEDLIKEEEKVK 477

Query: 563  TQSVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFE 622
            T ++S + KD    +KR+GFSD+++A     T+K +R  R  L V P YKRVDTCAAEF 
Sbjct: 478  TLALSAIDKDYMLRLKRKGFSDQRLAVLLGITDKNLRRHRHKLEVFPVYKRVDTCAAEFA 537

Query: 623  ANTPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIM 682
             +T Y+YS+Y+ ECE+ P+ + K++ILGGGPNRIGQGIEFDYCC H + +L+  GYETIM
Sbjct: 538  TDTAYLYSTYEEECEANPSTRDKIMILGGGPNRIGQGIEFDYCCVHAALALREDGYETIM 597

Query: 683  MNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYL 742
            +N NPETVSTDYDTSDRLYFEPLT+EDVL V  +E+P+G+IV +GGQTPLKL+    + L
Sbjct: 598  VNCNPETVSTDYDTSDRLYFEPLTLEDVLEVCRVEKPKGVIVHYGGQTPLKLA----RAL 653

Query: 743  DEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIA 802
            +E  +P         I GTSPD+ID AEDRERF  +++ LS+ QP     +SE +A+  A
Sbjct: 654  EEAGVP---------IIGTSPDAIDRAEDRERFQQMVQRLSLLQPPNATVRSEEEAIRAA 704

Query: 803  KEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVD 862
              IGYP+VVRPSYVLGGRAMEIVY  + L  YL  AV+V  + PVL+D +L+ AIE+DVD
Sbjct: 705  GGIGYPLVVRPSYVLGGRAMEIVYELDELKRYLREAVQVSNDSPVLLDHFLNCAIEMDVD 764

Query: 863  ALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCG 922
            A+ D   +VVIG IM+HIEQAGVHSGDSAC +P  ++S    D +     K+A  L V G
Sbjct: 765  AVCDGT-DVVIGAIMQHIEQAGVHSGDSACSLPPYSLSKEVQDEVRVQVKKMALELGVVG 823

Query: 923  LMNCQYAITTSGD-VYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKE 981
            LMN Q A+   GD +Y++E NPRASRTVPFVSK IG  LA  AA VM+GK+L +LGFT+E
Sbjct: 824  LMNVQLAL--QGDKIYVIEVNPRASRTVPFVSKCIGTSLAMIAARVMAGKTLKELGFTQE 881

Query: 982  VIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLS 1041
            +IP   SVKEAV PF KF G D +LGPEM+STGEVMG+  SF  AFAKAQ+ A + LP  
Sbjct: 882  IIPNFYSVKEAVFPFAKFPGVDPILGPEMKSTGEVMGVGDSFGEAFAKAQMGASEVLPTG 941

Query: 1042 GTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAG 1101
            GT F+S+ D  KP +  +A+  + +GF++V+T+GTA  +E  G+ V RV K+ EGRPH  
Sbjct: 942  GTAFISVRDDDKPQVAGVARDLIALGFEVVATAGTAKVIEAAGLKVRRVNKVTEGRPHVV 1001

Query: 1102 DMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNT 1161
            DM+ N ++ +++ T+ G      D   +RR  L +K+   TT++   A  EA++     T
Sbjct: 1002 DMIKNDEVSLIINTTEGRQ-SIADSYSIRRNALQHKIYCTTTIAAGEAICEALKFGPEKT 1060

Query: 1162 VTMTALQDF 1170
            V    LQD 
Sbjct: 1061 VRR--LQDL 1067


>gi|359438335|ref|ZP_09228365.1| carbamoyl-phosphate synthase large subunit [Pseudoalteromonas sp.
            BSi20311]
 gi|359444021|ref|ZP_09233825.1| carbamoyl-phosphate synthase large subunit [Pseudoalteromonas sp.
            BSi20439]
 gi|358026959|dbj|GAA64614.1| carbamoyl-phosphate synthase large subunit [Pseudoalteromonas sp.
            BSi20311]
 gi|358041970|dbj|GAA70074.1| carbamoyl-phosphate synthase large subunit [Pseudoalteromonas sp.
            BSi20439]
          Length = 1072

 Score = 1247 bits (3227), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 623/1077 (57%), Positives = 788/1077 (73%), Gaps = 18/1077 (1%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILILGAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  E+VE+++EKE+PDA+LPTMGGQTALN A+ L + G L K+GVELIGA  DA
Sbjct: 63   ATYIEPIHWEVVEKIIEKEKPDAVLPTMGGQTALNCALDLDKHGVLAKHGVELIGATADA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAE+R+ F  AM+ IG++ P + I +T+DE       IG  P IIRP+FT+GGTGGG+
Sbjct: 123  IDKAENRERFDVAMRNIGLECPRAEIAHTMDEARDTMTRIG-LPCIIRPSFTMGGTGGGV 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN EEFE IC+ GL  S TS++L+++SL+GWKEYE+EV+RD  DN +I+CSIEN DPMG
Sbjct: 182  AYNMEEFEEICERGLDLSPTSELLIDESLIGWKEYEMEVVRDKKDNCIIVCSIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGVE GGSNVQF VNPVDG +++IEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQIMRNASMAVLREIGVETGGSNVQFGVNPVDGRMVIIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT  KTPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKIAAKLAVGYTLDELQNDITGGKTPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            F FEKF G+   LTTQMKSVGE MA+GR  QES QKALR LE G +G+      +     
Sbjct: 362  FNFEKFAGANDRLTTQMKSVGEVMAIGRNQQESLQKALRGLEVGATGFNPIVALDDPKAK 421

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
            E++   LR P  +R+  I  AM+ GM V+++ EL+ ID W+L Q ++++  E  +    +
Sbjct: 422  EKIIRELREPGAERIWYIADAMRHGMSVEDVFELTKIDPWYLVQIEDILKDEAKISEVGM 481

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
              +  D   ++KR+GF+D +IA     +E E+R+KR  L ++P YKRVDTCAAEF ++T 
Sbjct: 482  VGLNADFLRKLKRKGFADPRIAEIAGVSEAEIRKKRHQLNIVPVYKRVDTCAAEFSSDTA 541

Query: 627  YMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSN 686
            YMYSSYD ECE+ P+ + K++++GGGPNRIGQGIEFDYCC H + +L+  GYETIM+N N
Sbjct: 542  YMYSSYDEECEANPSDRDKIMVIGGGPNRIGQGIEFDYCCVHAALALREDGYETIMVNCN 601

Query: 687  PETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHR 746
            PETVSTDYDTSDRLYFEP+T+EDVL ++ +E+P+G+IVQ+GGQTPLKL+          R
Sbjct: 602  PETVSTDYDTSDRLYFEPITLEDVLEIVRVEKPKGVIVQYGGQTPLKLA----------R 651

Query: 747  LPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEIG 806
               A+G   V + GTSPD+ID AEDRERF  +++ L + QP+     S  +AL  + EIG
Sbjct: 652  ELEANG---VPVIGTSPDAIDRAEDRERFQQLVERLDLLQPENATVTSTEEALLKSVEIG 708

Query: 807  YPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALAD 866
            +P+VVRPSYVLGGRAMEIVY ++ L  Y+  AV    E PVL+D++L +AIE+DVDA+ D
Sbjct: 709  FPLVVRPSYVLGGRAMEIVYDEQDLRRYMTEAVSASNEAPVLLDRFLDNAIEVDVDAICD 768

Query: 867  SCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNC 926
                V+IGGIMEHIEQAGVHSGDSAC +P  +++    D +      +A  L V GLMN 
Sbjct: 769  G-EQVIIGGIMEHIEQAGVHSGDSACSLPAHSLTQEVQDVMRKQVTDMALELGVVGLMNT 827

Query: 927  QYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPKH 986
            Q+A+   G VYL+E NPRA+RTVPFVSKA G  LAK AA  M+G+SL   G TKEVIP +
Sbjct: 828  QFAV-KDGKVYLIEVNPRAARTVPFVSKATGVALAKVAARCMAGQSLASQGITKEVIPPY 886

Query: 987  VSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVFL 1046
             SVKE VLPF KFQG D + GPEMRSTGEVMG+  +F  AFAKAQ+ A   LP  G   L
Sbjct: 887  YSVKEVVLPFAKFQGVDPIRGPEMRSTGEVMGVGDTFAEAFAKAQLGASNTLPRGGRALL 946

Query: 1047 SLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVAN 1106
            S+ +  KP +  +AK   D+GF++ +T GTA  LE  GI V RV K++EGRPH  D + N
Sbjct: 947  SVRNSDKPRIVELAKTMTDLGFELDATGGTAAALEDAGITVRRVNKVYEGRPHILDRIKN 1006

Query: 1107 GQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTVT 1163
            G+   +V T+ G    + D   LRR  L +K    TT++ A AN  A ++   + VT
Sbjct: 1007 GEYSYIVNTTEGRQAIE-DSKVLRRGALQHKTNYTTTLNAAFANCTANQADDRSKVT 1062



 Score =  238 bits (607), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 154/422 (36%), Positives = 239/422 (56%), Gaps = 24/422 (5%)

Query: 67  KIDS-SAELSNGAA---SSKDQKL-GKRTDLRKILILGAGPIVIGQACEFDYSGTQACKA 121
           ++D+ +AE S+  A   SS D++     +D  KI+++G GP  IGQ  EFDY    A  A
Sbjct: 528 RVDTCAAEFSSDTAYMYSSYDEECEANPSDRDKIMVIGGGPNRIGQGIEFDYCCVHAALA 587

Query: 122 LKEEGYEVILINSNPATIMTDPGLADRTYITPMTPELVEQVLEKERPDALLPTMGGQTAL 181
           L+E+GYE I++N NP T+ TD   +DR Y  P+T E V +++  E+P  ++   GGQT L
Sbjct: 588 LREDGYETIMVNCNPETVSTDYDTSDRLYFEPITLEDVLEIVRVEKPKGVIVQYGGQTPL 647

Query: 182 NLAVALAESGALEKYGVELIGAKLDAIKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECI 241
            LA        LE  GV +IG   DAI +AEDR+ F+Q ++ + +  P +    + +E +
Sbjct: 648 KLA------RELEANGVPVIGTSPDAIDRAEDRERFQQLVERLDLLQPENATVTSTEEAL 701

Query: 242 SIANEIGEFPLIIRPAFTLGGTGGGIAYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKE 301
             + EIG FPL++RP++ LGG    I Y++++        ++AS  + VL+++ L    E
Sbjct: 702 LKSVEIG-FPLVVRPSYVLGGRAMEIVYDEQDLRRYMTEAVSASNEAPVLLDRFLDNAIE 760

Query: 302 YELEVMRDLADNVVIICSIENVDPMGVHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREI 361
            +++ + D  + V+I   +E+++  GVH+GDS    PA +LT +    +R     +  E+
Sbjct: 761 VDVDAICD-GEQVIIGGIMEHIEQAGVHSGDSACSLPAHSLTQEVQDVMRKQVTDMALEL 819

Query: 362 GVECGGSNVQFAVNPVDGEVMVIEMNPRVSRSSALASKATGFPIAKMAAKLSVGYSLDQI 421
           GV  G  N QFAV   DG+V +IE+NPR +R+    SKATG  +AK+AA+   G SL   
Sbjct: 820 GV-VGLMNTQFAVK--DGKVYLIEVNPRAARTVPFVSKATGVALAKVAARCMAGQSL--A 874

Query: 422 PNDITKKTPASFEPSIDYVVTKIPRFAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQ 481
              ITK+    +     Y V ++    F KF G +P+   +M+S GE M +G TF E+F 
Sbjct: 875 SQGITKEVIPPY-----YSVKEVV-LPFAKFQGVDPIRGPEMRSTGEVMGVGDTFAEAFA 928

Query: 482 KA 483
           KA
Sbjct: 929 KA 930


>gi|433522923|ref|ZP_20479601.1| carbamoyl-phosphate synthase, large subunit [Neisseria meningitidis
            61103]
 gi|432257075|gb|ELL12381.1| carbamoyl-phosphate synthase, large subunit [Neisseria meningitidis
            61103]
          Length = 1071

 Score = 1247 bits (3227), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 625/1070 (58%), Positives = 794/1070 (74%), Gaps = 22/1070 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTDL+ ILI+GAGPIVIGQACEFDYSG QACKAL+EEGY+VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDLKSILIIGAGPIVIGQACEFDYSGAQACKALREEGYKVILVNSNPATIMTDPEMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  + VE+++ KERPDA+LPTMGGQTALN A+ LA +G L KY VELIGA  DA
Sbjct: 63   VTYIEPIMWQTVEKIIAKERPDAILPTMGGQTALNCALDLARNGVLAKYNVELIGATEDA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  FK+AM+ IG+  P S + +T++E ++   ++G FP +IRP+FT+GG+GGGI
Sbjct: 123  IDKAEDRGRFKEAMEKIGLSCPKSFVCHTMNEALAAQEQVG-FPTLIRPSFTMGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYNK+EF AIC+ G  AS T ++L+E+S+LGWKEYE+EV+RD  DN +IICSIEN DPMG
Sbjct: 182  AYNKDEFLAICERGFDASPTHELLIEQSVLGWKEYEMEVVRDKNDNCIIICSIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGV  GGSNVQFAVNP +GE++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQIMRNASLAVLREIGVNTGGSNVQFAVNPENGEMIVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VG++LD++ NDIT  KTPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGFTLDELRNDITGGKTPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            FAFEKFP ++  LTTQMKSVGE MA+GRT QESFQKALR LE G  G+   +      D 
Sbjct: 362  FAFEKFPAADDRLTTQMKSVGEVMAMGRTIQESFQKALRGLETGLCGFNPRS-----SDK 416

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
             +++  L  P P+RM  +  A + G  ++EIHE+  ID WFL Q ++L+  E+ +    +
Sbjct: 417  AEIRRELANPGPERMLFVADAFRAGFTLEEIHEICAIDPWFLAQIEDLMKEEKAVSDGIL 476

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
            S++       +KR+GFSDK+IA      EKEVRE R +L + P YKRVDTCAAEF   T 
Sbjct: 477  SDLDFAALRRLKRKGFSDKRIAQLLGVKEKEVREHRYTLDLHPVYKRVDTCAAEFATETD 536

Query: 627  YMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSN 686
            Y+YS+Y+ ECE+ P+ +KKV+ILGGGPNRIGQGIEFDYCC H + +L+ +G+ETIM+N N
Sbjct: 537  YLYSTYEEECEARPSDRKKVMILGGGPNRIGQGIEFDYCCVHAALALRESGFETIMVNCN 596

Query: 687  PETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHR 746
            PETVSTD+DTSDRLYFEPLT+EDVL ++  E P G+IV +GGQTPLKL+  +        
Sbjct: 597  PETVSTDFDTSDRLYFEPLTLEDVLEIVRTENPWGVIVHYGGQTPLKLANAL-------- 648

Query: 747  LPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEIG 806
               A+G   V I GTS DSIDAAEDRERF  ++ +L + QP   IA +E +AL  A+EIG
Sbjct: 649  --VANG---VNIIGTSADSIDAAEDRERFQKVLNDLGLRQPPNRIAHNEEEALVKAEEIG 703

Query: 807  YPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALAD 866
            YP+VVRPSYVLGGRAM+IV++ E L  Y+  AV+V  + PVL+D +L++AIE+DVD ++D
Sbjct: 704  YPLVVRPSYVLGGRAMQIVHSAEALQKYMREAVQVSEDSPVLLDFFLNNAIEVDVDCVSD 763

Query: 867  SCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNC 926
               +VVIGGIM+H+EQAG+HSGDS C +P  ++S    D I   T  +A  L V GLMN 
Sbjct: 764  G-KDVVIGGIMQHVEQAGIHSGDSGCSLPPYSLSEEIQDEIRRQTKAMAYALGVVGLMNV 822

Query: 927  QYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPKH 986
            Q+A+   G V++LE NPRASRTVPFVSKA G PLAK  A  M+G SL + G  KEV+P  
Sbjct: 823  QFAV-QDGVVFVLEVNPRASRTVPFVSKATGVPLAKVGARCMAGISLKEQGVEKEVVPDF 881

Query: 987  VSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVFL 1046
             +VKEAV PF KF G D +LGPEMRSTGEVMG+  SF  A+ KAQ+ AG++L  +G +FL
Sbjct: 882  YAVKEAVFPFIKFPGVDTILGPEMRSTGEVMGVGASFGEAYYKAQLGAGERLNPTGKIFL 941

Query: 1047 SLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVAN 1106
            S+ +  K  + + AK F  +G+ I +T GTA +L   G+ V+ + K+ EGRPH GD + N
Sbjct: 942  SVREEDKERVIKTAKNFQVLGYGICATRGTAQYLTEHGLIVQTINKVPEGRPHIGDALKN 1001

Query: 1107 GQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRS 1156
            G+I ++V T S D     D   +R+  L  +VP  TT +G  A +E  +S
Sbjct: 1002 GEIALVVNTVSSDPQSVSDSHIIRQSALQQRVPQYTTTAGGEAMSEGAKS 1051


>gi|88857846|ref|ZP_01132488.1| carbamoyl-phosphate synthase large subunit [Pseudoalteromonas
            tunicata D2]
 gi|88819463|gb|EAR29276.1| carbamoyl-phosphate synthase large subunit [Pseudoalteromonas
            tunicata D2]
          Length = 1072

 Score = 1247 bits (3227), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 618/1067 (57%), Positives = 784/1067 (73%), Gaps = 18/1067 (1%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILILGAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  E+VE+++EKE+PDA+LPTMGGQTALN A+ L   G L K+GVELIGA  DA
Sbjct: 63   ATYIEPIHWEVVEKIIEKEKPDAVLPTMGGQTALNCALDLDRRGVLAKHGVELIGATADA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  F  AMK IG++TP + I  +++    I   IG FP IIRP+FT+GGTGGG+
Sbjct: 123  IDKAEDRSRFDVAMKAIGLETPRAEIARSMESARDIVTRIG-FPCIIRPSFTMGGTGGGV 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEFE IC+ GL  S T ++L+++SL+GWKEYE+EV+RD  DN +I+CSIEN DPMG
Sbjct: 182  AYNQEEFEEICERGLDLSPTKELLIDESLIGWKEYEMEVVRDKNDNCIIVCSIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGVE GGSNVQF + P  G +++IEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQIMRNASMAVLREIGVETGGSNVQFGICPDTGRMVIIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITK-KTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT  KTPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKIAAKLAVGYTLDELQNDITGGKTPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            F FEKF G+   LTTQMKSVGE MA+GR  QES QKALR LE G +G+      +     
Sbjct: 362  FNFEKFAGANDRLTTQMKSVGEVMAIGRNQQESLQKALRGLEVGATGFNPIVALDDPSAR 421

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
            E++ + LR P  +R+  +  AM+ GM VD++ E + ID+WFL Q ++++  E  + +  +
Sbjct: 422  EKIIHELREPGAERIWYVADAMRHGMSVDDVFEYTKIDRWFLVQIEDILKDEAKIASSGM 481

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
            + + KD    +KR+GF+D +IA     +E E+R+KR +  + P YKRVDTCAAEF ++T 
Sbjct: 482  AGLNKDFLRRLKRKGFADARIAEIAGVSEAEIRKKRHNFNIFPVYKRVDTCAAEFSSDTA 541

Query: 627  YMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSN 686
            YMYS+YD ECE+ P+ + K++++GGGPNRIGQGIEFDYCC H + +L+  GYETIM+N N
Sbjct: 542  YMYSTYDEECEANPSNRDKIMVIGGGPNRIGQGIEFDYCCVHAALALREDGYETIMVNCN 601

Query: 687  PETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHR 746
            PETVSTDYDTSDRLYFEP+T+EDVL ++ +E+P+G+IVQ+GGQTPLKL+          R
Sbjct: 602  PETVSTDYDTSDRLYFEPITLEDVLEIVRVEKPKGVIVQYGGQTPLKLA----------R 651

Query: 747  LPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEIG 806
               A+G   V + GTSPD+ID AEDRERF  +++ L + QP      S  +A+A + EIG
Sbjct: 652  ALEANG---VPVIGTSPDAIDRAEDRERFQQLVERLGLLQPHNATVTSTEEAMAKSAEIG 708

Query: 807  YPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALAD 866
            +P+VVRPSYVLGGRAMEIVY ++ L  Y+  AV+   E PVL+D +L DAIE+DVDA+ D
Sbjct: 709  FPLVVRPSYVLGGRAMEIVYDEDDLRRYMTEAVQASNEAPVLLDHFLDDAIEVDVDAICD 768

Query: 867  SCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNC 926
                V+IGGIMEHIEQAGVHSGDSAC +P  T+S+   D +     ++A  L V GLMN 
Sbjct: 769  G-EQVIIGGIMEHIEQAGVHSGDSACSLPPYTLSAEIQDRMRDQVTRMALELGVVGLMNT 827

Query: 927  QYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPKH 986
            Q+A+   GDVYL+E NPRA+RTVPFVSKA   P+AK AA  M+G+SL   G TKE IP +
Sbjct: 828  QFAV-KDGDVYLIEVNPRAARTVPFVSKATSVPIAKIAARCMAGQSLASQGITKETIPPY 886

Query: 987  VSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVFL 1046
             SVKE VLPF KFQG D + GPEMRSTGEVMG+  +F  AFAKAQ+ AG  LP  G   L
Sbjct: 887  YSVKEVVLPFAKFQGVDPIRGPEMRSTGEVMGVGDNFAEAFAKAQLGAGNVLPRGGRALL 946

Query: 1047 SLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVAN 1106
            S+ +  K  +  +A+   ++GF++ +T GTA  LE  GIAV RV K+ EGRPH  D + N
Sbjct: 947  SVRNGDKKRIVELARIMTELGFELDATGGTAAALETAGIAVRRVNKVFEGRPHILDRIKN 1006

Query: 1107 GQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEA 1153
            G+   +V T+ G    + D   LRR  L +K    TT++ A AN +A
Sbjct: 1007 GEYSYIVNTTEGRQAIE-DSKVLRRGALQHKTNYTTTLNAAFANCKA 1052


>gi|359687835|ref|ZP_09257836.1| carbamoyl phosphate synthase large subunit [Leptospira licerasiae
            serovar Varillal str. MMD0835]
 gi|418750301|ref|ZP_13306587.1| carbamoyl-phosphate synthase, large subunit [Leptospira licerasiae
            str. MMD4847]
 gi|418758727|ref|ZP_13314909.1| carbamoyl-phosphate synthase, large subunit [Leptospira licerasiae
            serovar Varillal str. VAR 010]
 gi|384114629|gb|EIE00892.1| carbamoyl-phosphate synthase, large subunit [Leptospira licerasiae
            serovar Varillal str. VAR 010]
 gi|404272904|gb|EJZ40224.1| carbamoyl-phosphate synthase, large subunit [Leptospira licerasiae
            str. MMD4847]
          Length = 1103

 Score = 1247 bits (3227), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 641/1119 (57%), Positives = 808/1119 (72%), Gaps = 58/1119 (5%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KR DLR +LILG+GPIVIGQACEFDYSGTQA KAL+E+G  VIL+NSNPATIMTDP LAD
Sbjct: 3    KREDLRSVLILGSGPIVIGQACEFDYSGTQAAKALREKGIRVILLNSNPATIMTDPDLAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TY+ P+T  +V+++LEKE+PDA+LPT+GGQTALNLA+A   +G LEKY VELIGAK+DA
Sbjct: 63   ATYVEPLTVSVVQKILEKEKPDAILPTVGGQTALNLALACHNAGILEKYNVELIGAKIDA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            IKKAEDR+LFK+AM+ IGVK P SG+ N L E   I  +IG  PLI+RPAFTLGGTGGGI
Sbjct: 123  IKKAEDRELFKRAMEKIGVKVPRSGLANNLKEAAEIKAQIG-LPLIVRPAFTLGGTGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AY++E F+ +   GL AS  SQVL+E+S+LGWKE+ELEVMRDLADNVVIICSIEN+DPMG
Sbjct: 182  AYDEETFDEVVGKGLKASPISQVLLEQSVLGWKEFELEVMRDLADNVVIICSIENIDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAP QTL+DKEYQ LRD SI IIREIGVE GGSN+QFAVNP DG+V+VIEMN
Sbjct: 242  VHTGDSITVAPQQTLSDKEYQNLRDMSIKIIREIGVETGGSNIQFAVNPEDGDVIVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRF 447
            PRVSRSSALASKATGFPIAK+AA LS+GYSLD+I NDIT+ TPASFEPSIDYVVTKIPRF
Sbjct: 302  PRVSRSSALASKATGFPIAKIAALLSIGYSLDEIKNDITRVTPASFEPSIDYVVTKIPRF 361

Query: 448  AFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCS-NVKEL---- 502
            AFEKFPG++  L  QMK+VGEAMA+GRTF+ESFQKA+RSLE    G+G   N  EL    
Sbjct: 362  AFEKFPGTDDTLGVQMKAVGEAMAIGRTFKESFQKAMRSLEIDRFGFGSDGNFAELVEFH 421

Query: 503  ----DWDWEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVE 558
                    E++   LR PN  R+  +  A+++G  V++IHEL  ID WFL QF++L ++E
Sbjct: 422  SLSVPQKKERIDSFLRRPNDKRIFYVKKALEEGYSVEKIHELCKIDPWFLYQFEDLQNLE 481

Query: 559  QFLLTQSVSNMTKDDFYEVKRRGFSDKQIAFATK--------STEKEVREKRLSLGVI-- 608
            +  + +  S + K     +K+ GFS++Q+A+ +K        ST +   +K+  +G I  
Sbjct: 482  KEFIQKGNSVLGK-----LKKAGFSNRQLAYLSKKGEIEKILSTSQTPDKKKAEIGSILK 536

Query: 609  ----------------PSYKRVDTCAAEFEANTPYMYSSYDFECESAPTQKKKVLILGGG 652
                            P YKR+DTCA EFEA TPY YSSYD E E+  T KK V+ILGGG
Sbjct: 537  RQEKNLEEVLESSKIEPIYKRIDTCAGEFEAYTPYFYSSYDEEDETNVTSKKSVIILGGG 596

Query: 653  PNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSNPETVSTDYDTSDRLYFEPLTVEDVLN 712
            PNRIGQGIEFDYCCCH SF+LQ  G E+IM+NSNPETVSTDYDTSDRLYFEPLT+EDV+ 
Sbjct: 597  PNRIGQGIEFDYCCCHASFALQDLGVESIMVNSNPETVSTDYDTSDRLYFEPLTLEDVMQ 656

Query: 713  VIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHRLPSASGDGLVRIWGTSPDSIDAAEDR 772
            +   E+P+G+I+QFGGQTPLKL+    + L+   +P         I GTSPDSID AEDR
Sbjct: 657  IYKKEKPDGVIIQFGGQTPLKLA----KDLESRGVP---------ILGTSPDSIDRAEDR 703

Query: 773  ERFNAIIKELSIEQPKGGIAKSEADALAIAKEIGYPVVVRPSYVLGGRAMEIVYTDETLV 832
            +RF  ++++L +  P  GIA S  +A  IA  I YPV+VRPSYVLGGRAM I+  ++ L 
Sbjct: 704  KRFAEVLEKLKLISPNNGIATSAEEARKIANHITYPVLVRPSYVLGGRAMLIISEEKELD 763

Query: 833  TYLENAVEVDPERPVLIDKYLSDAIEIDVDALADSCGNVVIGGIMEHIEQAGVHSGDSAC 892
             Y+E A E+  +RP+LID +L DA+E+DVDAL D   +V I GIMEHIE+AG+HSGDSAC
Sbjct: 764  KYMEKAEEISEDRPLLIDSFLEDAVEVDVDALCDG-KDVFIAGIMEHIEEAGIHSGDSAC 822

Query: 893  MIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNCQYAITTSGDVYLLEANPRASRTVPFV 952
            ++P +++S   LD I S T  LA  L V GL+N QYA+     VY++E NPRASRTVPFV
Sbjct: 823  VLPPQSLSKKVLDDIRSATRALALELQVKGLINIQYAVKEEV-VYVIEVNPRASRTVPFV 881

Query: 953  SKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRS 1012
            SKA+GHP+ KYA  +M G++L  L   KE++   V+VKEAVLPF KF G D +LGPEMRS
Sbjct: 882  SKALGHPVVKYATRIMMGETLKQLPLPKEMVFPTVNVKEAVLPFNKFPGVDTILGPEMRS 941

Query: 1013 TGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVFLSLNDLTKPHLERIAKAFLDIGFKIVS 1072
            TGEVMGI  +   AF K+Q  AG++LP  GTVF+S+ND  K  L +  K    +GF +++
Sbjct: 942  TGEVMGIADTAGEAFLKSQYMAGEELPSQGTVFVSVNDKDKKELLKYIKDLSGLGFNLIA 1001

Query: 1073 TSGTAHFLELKGIAVERVLKMHEGR-PHAGDMVANGQIQMMVITSSGDSLDQIDGLKLRR 1131
            T GT  FL   GI   ++ K+++ + P A D +   +I  +++ +    + + D   +R+
Sbjct: 1002 TEGTHKFLSENGILSSKINKVYDNQFPTALDYIRENKIH-LILNTPLSRVTRDDSFAIRQ 1060

Query: 1132 RGLAYKVPVITTVSGALANAEAIRSLKSNTVTMTALQDF 1170
              + YK+P +TT S A A  + +  +     T+ +LQ+ 
Sbjct: 1061 AAIRYKIPCLTTASAAKALIKGMIEMIDKGFTIRSLQEI 1099


>gi|268685811|ref|ZP_06152673.1| carbamoyl-phosphate synthase subunit large [Neisseria gonorrhoeae
            SK-93-1035]
 gi|268626095|gb|EEZ58495.1| carbamoyl-phosphate synthase subunit large [Neisseria gonorrhoeae
            SK-93-1035]
          Length = 1071

 Score = 1247 bits (3227), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 621/1070 (58%), Positives = 793/1070 (74%), Gaps = 22/1070 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTDL+ ILI+GAGPIVIGQACEFDYSG QACKAL+EEGY+VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDLKSILIIGAGPIVIGQACEFDYSGAQACKALREEGYKVILVNSNPATIMTDPEMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  + VE+++ KERPDA+LPTMGGQTALN A+ LA +G L KY VELIGA  DA
Sbjct: 63   VTYIEPIMWQTVEKIIAKERPDAILPTMGGQTALNCALDLARNGVLAKYNVELIGATEDA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  FK+AM+ IG+  P S + +T++E ++   ++G FP +IRP+FT+GG+GGGI
Sbjct: 123  IDKAEDRGRFKEAMEKIGLSCPKSFVCHTMNEALAAQEQVG-FPTLIRPSFTMGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYNK+EF AIC+ G  AS T ++L+E+S+LGWKEYE+EV+RD ADN +IICSIEN DPMG
Sbjct: 182  AYNKDEFLAICERGFDASPTHELLIEQSVLGWKEYEMEVVRDKADNCIIICSIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGV+ GGSNVQFAVNP +GE++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQIMRNASLAVLREIGVDTGGSNVQFAVNPENGEMIVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VG++LD++ NDIT  +TPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGFTLDELRNDITGGRTPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            FAFEKFP ++  LTTQMKSVGE MA+GRT QESFQKALR LE G  G+   +      D 
Sbjct: 362  FAFEKFPAADDRLTTQMKSVGEVMAMGRTIQESFQKALRGLETGLCGFNPRS-----EDK 416

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
             +++  L  P P+RM  +  A + G   +EIHE+  ID WFL Q ++L+  E+ +    +
Sbjct: 417  AEIRRELANPGPERMLFVADAFRAGFTPEEIHEICAIDPWFLAQIEDLMKEEKSVSDGQL 476

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
             ++       +KR+GFSDK++A     +EKEVRE R +L + P YKRVDTCAAEF   T 
Sbjct: 477  QDLDYAALRRLKRKGFSDKRLAQLLNVSEKEVREHRYALKLHPVYKRVDTCAAEFATETA 536

Query: 627  YMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSN 686
            Y+YS+Y+ ECES P+ +KKV+ILGGGPNRIGQGIEFDYCC H + +L+ +G+ETIM+N N
Sbjct: 537  YLYSTYEEECESRPSDRKKVMILGGGPNRIGQGIEFDYCCVHAALALRESGFETIMVNCN 596

Query: 687  PETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHR 746
            PETVSTD+DTSDRLYFEPLT+EDVL ++  E P G+IV +GGQTPLKL+           
Sbjct: 597  PETVSTDFDTSDRLYFEPLTLEDVLEIVRTENPWGVIVHYGGQTPLKLA----------- 645

Query: 747  LPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEIG 806
              +A  +  V I GTS DSIDAAEDRERF  ++ +L + QP   IA +E +AL  A+EIG
Sbjct: 646  --NALVENGVNIIGTSADSIDAAEDRERFQKVLNDLGLRQPPNRIAHNEEEALVKAEEIG 703

Query: 807  YPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALAD 866
            YP+VVRPSYVLGGRAM+I+++ E L  Y+  AV+V  + PVL+D +L++AIE+DVD ++D
Sbjct: 704  YPLVVRPSYVLGGRAMQIIHSAEQLQKYMREAVQVSEDSPVLLDFFLNNAIEVDVDCVSD 763

Query: 867  SCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNC 926
               +VVIGGIM+H+EQAG+HSGDS C +P  ++S    D I   T  +A  L V GLMN 
Sbjct: 764  G-KDVVIGGIMQHVEQAGIHSGDSGCSLPPYSLSEEIQDEIRRQTKAMAYALGVVGLMNV 822

Query: 927  QYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPKH 986
            Q+A+   G V++LE NPRASRTVPFVSKA G PLAK  A  M+G SL + G  KEV+P  
Sbjct: 823  QFAV-QDGVVFVLEVNPRASRTVPFVSKATGVPLAKVGARCMAGISLKEQGVEKEVVPDF 881

Query: 987  VSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVFL 1046
             +VKEAV PF KF G D +L PEMRSTGEVMG+  SF  A+ KAQ+ AG++L  +G +FL
Sbjct: 882  YAVKEAVFPFIKFPGVDTILSPEMRSTGEVMGVGASFGEAYYKAQLGAGERLNPTGKIFL 941

Query: 1047 SLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVAN 1106
            S+ +  K  + + AK F  +G+ I +T GTA +L   G+ V+ + K+ EGRPH GD + N
Sbjct: 942  SVREEDKERVIKTAKNFQALGYGICATRGTAQYLTEHGLIVQAINKVPEGRPHIGDALKN 1001

Query: 1107 GQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRS 1156
            G+I ++V T S D     D   +R+  L  +VP  TT +G  A +E  +S
Sbjct: 1002 GEIALVVNTVSSDPQSVSDSHIIRQSALQQRVPQYTTTAGGEAMSEGAKS 1051


>gi|303256866|ref|ZP_07342880.1| carbamoyl-phosphate synthase, large subunit [Burkholderiales
            bacterium 1_1_47]
 gi|330998885|ref|ZP_08322612.1| carbamoyl-phosphate synthase, large subunit [Parasutterella
            excrementihominis YIT 11859]
 gi|302860357|gb|EFL83434.1| carbamoyl-phosphate synthase, large subunit [Burkholderiales
            bacterium 1_1_47]
 gi|329576099|gb|EGG57618.1| carbamoyl-phosphate synthase, large subunit [Parasutterella
            excrementihominis YIT 11859]
          Length = 1074

 Score = 1247 bits (3227), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 623/1080 (57%), Positives = 794/1080 (73%), Gaps = 25/1080 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ +LI+GAGPIVIGQACEFDYSG QACKAL+EEGY+VIL+NSNPATIMTDP  AD
Sbjct: 3    KRTDIKSVLIIGAGPIVIGQACEFDYSGAQACKALREEGYKVILVNSNPATIMTDPQTAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+T E+VE+++ KERPDA+LPTMGGQTALN A+ LA+SG LEKY +ELIGA  +A
Sbjct: 63   VTYIEPITKEVVERIIAKERPDAILPTMGGQTALNCAMELAKSGVLEKYNIELIGASPEA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I+KAEDR  FK+AM  IG+ +  SGI  +LD+ + +  +IG FP IIRP+FTLGG+GGGI
Sbjct: 123  IEKAEDRLKFKEAMDKIGLSSARSGIAYSLDDALKVQAKIG-FPAIIRPSFTLGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN EEF  IC  GL  S T ++L+E+SLLGWKEYE+EV+RD  DN +I+CSIEN DPMG
Sbjct: 182  AYNMEEFIQICTRGLELSPTHELLIEESLLGWKEYEMEVVRDSKDNCIIVCSIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ +RD SIAI+REIGV+ GGSNVQFAVNP DG ++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQIMRDASIAILREIGVDTGGSNVQFAVNPKDGRLVVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITK-KTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ N+IT  +TPASFEP+IDYVV K PR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGYTLDELKNEITGGRTPASFEPTIDYVVVKTPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            FAFEKFP ++  LTTQMKSVGE MA+GRTFQE+ QKALR LE G  G     + E+  D 
Sbjct: 362  FAFEKFPKADKRLTTQMKSVGEVMAIGRTFQEALQKALRGLETGKDG-----LNEISTDR 416

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
              + + +  P PDR+  +  A + G  V E H  + ID WFL Q KEL+D+E  L   S+
Sbjct: 417  ATIHHEISEPGPDRLWYLADAFRLGYTVKEAHRATRIDPWFLVQVKELVDIENRLKEYSL 476

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
              ++K++   +K++GFSD++IA   K  E +VR +R  LG+ P YKRVDTCA EF  +T 
Sbjct: 477  PELSKEEMLFLKKKGFSDRRIAKLLKVKEDQVRARRHELGIRPVYKRVDTCAGEFPTDTA 536

Query: 627  YMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSN 686
            YMYS+Y+ E E  P+ ++K++ILGGGPNRIGQGIEFDYCC H S +L+  GYETIM+N N
Sbjct: 537  YMYSTYEEESEVNPSDRRKIMILGGGPNRIGQGIEFDYCCVHASMALREDGYETIMVNCN 596

Query: 687  PETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHR 746
            PETVSTDYDTSDRLYFEP+T+EDVL +ID+E+PEG+IVQ+GGQTPLKL+          R
Sbjct: 597  PETVSTDYDTSDRLYFEPVTLEDVLEIIDVEKPEGVIVQYGGQTPLKLA----------R 646

Query: 747  LPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEIG 806
               A+G   V I GTSPDSIDAAEDRERF  +++ L + QP    A++E +A+ +A EIG
Sbjct: 647  ALEANG---VNIIGTSPDSIDAAEDRERFQHLLQNLGLHQPPNRTARTEEEAIRLADEIG 703

Query: 807  YPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALAD 866
            YP+VVRPSYVLGGRAM+IV+    L  Y+  A++V  + PVL+D++L DA+E+DVDA++D
Sbjct: 704  YPLVVRPSYVLGGRAMDIVHDRSELERYMREAIKVSFDSPVLLDRFLDDAVEMDVDAVSD 763

Query: 867  SCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNC 926
                V IGG+M+HIEQAGVHSGDSAC IP  ++  + ++ +   T ++A+ LNV GLMN 
Sbjct: 764  G-KEVRIGGVMQHIEQAGVHSGDSACSIPPYSLDPALVEEVKRQTREMARALNVVGLMNV 822

Query: 927  QYAI----TTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEV 982
            Q+AI    +   ++++LE NPRASRTVPFVSK+ G  LAK AA  M G+SL +     EV
Sbjct: 823  QFAIQHAFSDHPEIFVLEVNPRASRTVPFVSKSTGQQLAKIAARCMVGQSLEEQKQPVEV 882

Query: 983  IPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSG 1042
               H SVKEAV PF KF G D +LGPEMRSTGEVMG+  SF  A  K+Q+ A   +P SG
Sbjct: 883  ELDHYSVKEAVFPFAKFLGVDPVLGPEMRSTGEVMGVGRSFGEALFKSQLGADSAIPKSG 942

Query: 1043 TVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGD 1102
             VF+S+ +  KP L ++AK F + G+++V+T GTA  +   G   + V K+ EGRP+  D
Sbjct: 943  RVFISVKEEDKPRLPQLAKNFTEAGYQLVATRGTAKVIREAGYRCDVVNKVSEGRPNIVD 1002

Query: 1103 MVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTV 1162
             + NG IQ+++  ++    +  D   +R   LA  V   T ++ ALA  E IR ++   V
Sbjct: 1003 ELKNGTIQLVIAVAAESRSEIADASAIRIASLANHVTFYTAMANALAVIEGIRHMQDTEV 1062


>gi|148553362|ref|YP_001260944.1| carbamoyl phosphate synthase large subunit [Sphingomonas wittichii
            RW1]
 gi|148498552|gb|ABQ66806.1| carbamoyl-phosphate synthase large subunit [Sphingomonas wittichii
            RW1]
          Length = 1110

 Score = 1247 bits (3226), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 641/1129 (56%), Positives = 816/1129 (72%), Gaps = 71/1129 (6%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD+  ILI+GAGPIVIGQACEFDYSGTQACKAL+EEGY ++L+NSNPATIMTDP +AD
Sbjct: 3    KRTDISSILIIGAGPIVIGQACEFDYSGTQACKALREEGYRIVLVNSNPATIMTDPEMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TY+ P+TPE+V +++EKERPDA+LPTMGGQTALN A+AL   G LEKYG ++IGA  +A
Sbjct: 63   ATYVEPITPEIVARIIEKERPDAVLPTMGGQTALNTALALFNDGTLEKYGCQMIGADAEA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  F+QAM  IG+++P S + +TLDE + + + +G  P IIRP+FT+GGTGGGI
Sbjct: 123  IDKAEDRLKFRQAMDKIGLESPRSDVAHTLDEALRVLDYVG-LPAIIRPSFTMGGTGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYNK+EF  I   GL AS T++VL+E+S+LGWKEYE+EV+RD ADN +IICSIENVDPMG
Sbjct: 182  AYNKDEFVKIVTGGLDASPTTEVLIEESVLGWKEYEMEVVRDRADNCIIICSIENVDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPA TLTDKEYQ +R+ SIA++REIGVE GGSNVQFAVNP DG ++VIEMN
Sbjct: 242  VHTGDSITVAPALTLTDKEYQIMRNASIAVLREIGVETGGSNVQFAVNPADGRLVVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRF 447
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD+I NDIT  TPASFEP+IDYVVTKIPRF
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGYTLDEIMNDITGATPASFEPTIDYVVTKIPRF 361

Query: 448  AFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWG-CSNVKELDWDW 506
            AFEKF G+EPLL+T MKSVGE MA+GR   ES QKALR LE G +G+    N+K      
Sbjct: 362  AFEKFKGAEPLLSTAMKSVGETMAIGRNIHESMQKALRGLETGLAGFNVVENLK--GAAR 419

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFL----L 562
              ++  L  P PDR+     A+++G  VD+IH ++  + WFL +  E++  E+ +    L
Sbjct: 420  SVIEEELARPTPDRLLVAAQALREGFSVDDIHRIAKYEPWFLDRLAEIVAAEEEVCREGL 479

Query: 563  TQSVSNMTKDDFYEVKRRGFSDKQIAF------------------------ATKS----- 593
             Q  + M +     +K  GFSDK++A+                        A K+     
Sbjct: 480  PQDAAGMRR-----LKAMGFSDKRLAWLALQSANLAGMAREQARGSGIVHDAAKAMTGGI 534

Query: 594  TEKEVREKRLSLGVIPSYKRVDTCAAEFEANTPYMYSSYDF------ECESAPTQKKKVL 647
            TEKEVR  R  LGV P +KR+DTCAAEFEA TPYMYS+Y+       ECES P+ ++K++
Sbjct: 535  TEKEVRAHRHKLGVRPVFKRIDTCAAEFEAKTPYMYSTYEAPSFGEPECESNPSDREKIV 594

Query: 648  ILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSNPETVSTDYDTSDRLYFEPLTV 707
            ILGGGPNRIGQGIEFDYCCCH  F+L  AGYETIM+N NPETVSTDYDTSDRLYFEPLT 
Sbjct: 595  ILGGGPNRIGQGIEFDYCCCHACFALADAGYETIMVNCNPETVSTDYDTSDRLYFEPLTA 654

Query: 708  EDVLNVIDLERP----EGIIVQFGGQTPLKLSLPIHQYLDEHRLPSASGDGLVRIWGTSP 763
            EDVL ++ +E+     +G+IVQFGGQTPLKL+    Q L++  +P         I GTSP
Sbjct: 655  EDVLEILHVEQSKGTLKGVIVQFGGQTPLKLA----QELEDAGIP---------ILGTSP 701

Query: 764  DSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEIGYPVVVRPSYVLGGRAME 823
            D+ID AEDRERF A++ EL + QP+ GIA+S  +ALA+A+ +GYPV++RPSYVLGGRAME
Sbjct: 702  DAIDLAEDRERFAALVGELGLSQPRNGIARSREEALAVAERVGYPVLMRPSYVLGGRAME 761

Query: 824  IVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALADSCGNVVIGGIMEHIEQA 883
            IV     L  Y+  AV+V  + PVLID+YL DAIE+DVDA+ D   +VV+ G+++HIE+A
Sbjct: 762  IVEDPSQLDQYISTAVQVSGDSPVLIDQYLRDAIEVDVDAICDG-DDVVVAGVLQHIEEA 820

Query: 884  GVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNCQYAITTSGDVYLLEANP 943
            GVHSGDSAC +P  ++    +  I   T  LA+ L V GLMN QYA+   G+VYL+E NP
Sbjct: 821  GVHSGDSACTLPPYSLPKEIIAEIERQTDALARALKVRGLMNVQYAV-KDGEVYLIEVNP 879

Query: 944  RASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPKHVSVKEAVLPFEKFQGCD 1003
            RASRTVPFV+KAIG P+AK AA VM+G+ L  L   +  +  +++VKEAV PF +F G D
Sbjct: 880  RASRTVPFVAKAIGQPIAKIAARVMAGERLKALPRIRLDV-DYIAVKEAVFPFARFPGVD 938

Query: 1004 VLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVFLSLNDLTKPHLERIAKAF 1063
             +L PEM+STGEVMGID  F  AFAKAQ+ AG +LPL GT F+S+ D  K H+    +  
Sbjct: 939  PVLSPEMKSTGEVMGIDSDFATAFAKAQLGAGTRLPLGGTAFVSVKDSDKGHILPAVRQL 998

Query: 1064 LDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVANGQIQMMVITSSG-DSLD 1122
            + + F I++TSGTA FL  +G+ VE VLK  EGRP+  D + +G + ++  T+ G  SL 
Sbjct: 999  IAMDFTILATSGTATFLREQGLEVETVLKKREGRPNIVDRIVDGDVDLIFNTTEGWQSL- 1057

Query: 1123 QIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTVTMTALQDFF 1171
             +D   +R   L  +VP  TT + ++A A+AI +L+   + + ALQ ++
Sbjct: 1058 -LDSKAIRTSALYGRVPYFTTAAASVAAAQAIGALRERKLEVRALQSYY 1105


>gi|421114663|ref|ZP_15575077.1| carbamoyl-phosphate synthase, large subunit [Leptospira interrogans
            serovar Canicola str. Fiocruz LV133]
 gi|421121305|ref|ZP_15581602.1| carbamoyl-phosphate synthase, large subunit [Leptospira interrogans
            str. Brem 329]
 gi|410013384|gb|EKO71461.1| carbamoyl-phosphate synthase, large subunit [Leptospira interrogans
            serovar Canicola str. Fiocruz LV133]
 gi|410345739|gb|EKO96809.1| carbamoyl-phosphate synthase, large subunit [Leptospira interrogans
            str. Brem 329]
          Length = 1106

 Score = 1247 bits (3226), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 638/1119 (57%), Positives = 805/1119 (71%), Gaps = 58/1119 (5%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            +R D+R +LILG+GPIVIGQACEFDYSGTQA KALKE+G  VIL+NSNPATIMTDP LAD
Sbjct: 3    RREDIRSVLILGSGPIVIGQACEFDYSGTQAAKALKEKGIRVILLNSNPATIMTDPDLAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TY+ PMT  +V+++LEKE+PDA+LPT+GGQTALNLA+A   +G LEKY VELIGAK+DA
Sbjct: 63   ATYVEPMTVPVVQKILEKEKPDAILPTVGGQTALNLALACNSAGILEKYNVELIGAKVDA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            IKKAEDR+LFK+AM+ IGV+ P SG+ N L + + I N++G  PLI+RPAFTLGGTGGGI
Sbjct: 123  IKKAEDRELFKKAMEKIGVRVPASGLANNLKDAVEIKNKLG-LPLIVRPAFTLGGTGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AY +E FE +   GL AS  SQVL+E+S+LGWKE+ELEVMRDLADNVVIICSIEN+DPMG
Sbjct: 182  AYTEETFEEVVSKGLKASPISQVLLEESVLGWKEFELEVMRDLADNVVIICSIENIDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAP QTL+DKEYQ LRD SIAIIREIGVE GGSN+QFAVNP +G+V+VIEMN
Sbjct: 242  VHTGDSITVAPQQTLSDKEYQNLRDMSIAIIREIGVETGGSNIQFAVNPTNGDVIVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRF 447
            PRVSRSSALASKATGFPIAK+AA LS+GY+LD+I NDIT+ TPASFEPSIDYVVTK+PRF
Sbjct: 302  PRVSRSSALASKATGFPIAKIAALLSIGYTLDEIKNDITRVTPASFEPSIDYVVTKVPRF 361

Query: 448  AFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSN-VKEL---- 502
            AFEKFPG++  L  QMK+VGEAMA+GRTF+ESFQKALRSLE    G+G     +EL    
Sbjct: 362  AFEKFPGTDDTLGVQMKAVGEAMAIGRTFKESFQKALRSLEIDRYGFGSDGYFQELLYSR 421

Query: 503  ----DWDWEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVE 558
                D   E +   L+ PN  R+  +  A  +G  VD+IH+L  ID+WFL Q + L+ +E
Sbjct: 422  SLNNDQRKEWIDSHLKRPNDKRIFYVKLAFDEGYTVDQIHDLCKIDRWFLWQMEGLLKLE 481

Query: 559  QFLLTQSVSNMTKDDFYEVKRRGFSDKQIAFAT--------------------------K 592
                 +  S       Y++K+ GFS++Q++F                            K
Sbjct: 482  -----KEYSEKGNSILYKMKQVGFSNRQLSFLKNKKQILDLLDGNLRVDLKKTEIQNLLK 536

Query: 593  STEKEVREKRLSLGVIPSYKRVDTCAAEFEANTPYMYSSYDFECESAPTQKKKVLILGGG 652
             +E+E+  +  S  ++P YKR+DTCA EFEA TPY YSSYD E ES  T  K V+ILGGG
Sbjct: 537  LSEEEIEVELGSKKILPVYKRIDTCAGEFEAYTPYFYSSYDEEDESDVTNAKSVMILGGG 596

Query: 653  PNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSNPETVSTDYDTSDRLYFEPLTVEDVLN 712
            PNRIGQGIEFDYCCC  S++LQ  G E+IM+NSNPETVSTDYDTSDRLYFEPLT+EDV  
Sbjct: 597  PNRIGQGIEFDYCCCQASYALQDLGIESIMINSNPETVSTDYDTSDRLYFEPLTLEDVYR 656

Query: 713  VIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHRLPSASGDGLVRIWGTSPDSIDAAEDR 772
            +   E+PEG+I+QFGGQTPLKL+  + +           G   V+I GTSPDSID AEDR
Sbjct: 657  IYQNEKPEGVIIQFGGQTPLKLAKDLEK----------KG---VKILGTSPDSIDRAEDR 703

Query: 773  ERFNAIIKELSIEQPKGGIAKSEADALAIAKEIGYPVVVRPSYVLGGRAMEIVYTDETLV 832
            +RF  ++++L +  P+ GIA S  +A  IA +IGYPV+VRPSYVLGGRAM I+  ++ L 
Sbjct: 704  KRFVEVLEKLKLNSPESGIATSMEEAREIAHKIGYPVLVRPSYVLGGRAMLIINEEKELD 763

Query: 833  TYLENAVEVDPERPVLIDKYLSDAIEIDVDALADSCGNVVIGGIMEHIEQAGVHSGDSAC 892
             Y+E A E+  +RP+LID +L DAIE+DVDAL D    V + GIMEHIE+AG+HSGDSAC
Sbjct: 764  RYMEKAEEISKDRPLLIDSFLEDAIEVDVDALCDG-KEVFVTGIMEHIEEAGIHSGDSAC 822

Query: 893  MIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNCQYAITTSGDVYLLEANPRASRTVPFV 952
            ++P +T+S + +D I   T+ LA  L V GL+N QYA+     +Y++E NPRASRTVPFV
Sbjct: 823  VLPPQTLSKNMMDEIRKATVNLALELQVKGLINIQYAVKNE-ILYIIEVNPRASRTVPFV 881

Query: 953  SKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRS 1012
            SKA+GHP+ KYA  +M G+SL  L   KE+    VSVKE VLPF KF G D +LGPEMRS
Sbjct: 882  SKALGHPIVKYATRIMMGESLKSLPLPKEMEFSQVSVKEVVLPFNKFPGVDTILGPEMRS 941

Query: 1013 TGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVFLSLNDLTKPHLERIAKAFLDIGFKIVS 1072
            TGEVMGI  +   AF K+Q  AG +LP  GTVF+S+ND TK  L    K   ++GF +++
Sbjct: 942  TGEVMGIASTAGEAFLKSQYMAGDELPSQGTVFVSINDKTKAELLSYIKDLSELGFNLIA 1001

Query: 1073 TSGTAHFLELKGIAVERVLKMHEG-RPHAGDMVANGQIQMMVITSSGDSLDQIDGLKLRR 1131
            TSGT  FL   GI   ++ K+++G  P A D +   +I  ++I +    + + D   +R+
Sbjct: 1002 TSGTHKFLSDNGILSSKINKVYDGIFPTALDYIRENKIH-LIINTPLSRVTRDDSFTIRQ 1060

Query: 1132 RGLAYKVPVITTVSGALANAEAIRSLKSNTVTMTALQDF 1170
              + +KVP +TT + A A  + +  +K+   T+ +LQ+ 
Sbjct: 1061 AAIRFKVPCLTTSNAAKALIKGMVEMKNKGFTIHSLQEI 1099


>gi|240015805|ref|ZP_04722345.1| carbamoyl phosphate synthase large subunit [Neisseria gonorrhoeae
            FA6140]
 gi|268594030|ref|ZP_06128197.1| carbamoyl phosphate synthase large subunit [Neisseria gonorrhoeae
            35/02]
 gi|268547419|gb|EEZ42837.1| carbamoyl phosphate synthase large subunit [Neisseria gonorrhoeae
            35/02]
          Length = 1071

 Score = 1247 bits (3226), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 621/1070 (58%), Positives = 792/1070 (74%), Gaps = 22/1070 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTDL+ ILI+GAGPIVIGQACEFDYSG QACKAL+EEGY+VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDLKSILIIGAGPIVIGQACEFDYSGAQACKALREEGYKVILVNSNPATIMTDPEMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  + VE+++ KERPDA+LPTMGGQTALN A+ LA +G L KY VELIGA  DA
Sbjct: 63   VTYIEPIMWQTVEKIIAKERPDAILPTMGGQTALNCALDLARNGVLAKYNVELIGATEDA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  FK+AM+ IG+  P S + +T++E ++   ++G FP +IRP+FT+GG+GGGI
Sbjct: 123  IDKAEDRGRFKEAMEKIGLSCPKSFVCHTMNEALAAQEQVG-FPTLIRPSFTMGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYNK+EF AIC+ G  AS T ++L+E+S+LGWKEYE+EV+RD ADN +IICSIEN DPMG
Sbjct: 182  AYNKDEFLAICERGFDASPTHELLIEQSVLGWKEYEMEVVRDKADNCIIICSIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGV+ GGSNVQFAVNP +GE++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQIMRNASLAVLREIGVDTGGSNVQFAVNPENGEMIVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VG++LD++ NDIT  +TPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGFTLDELRNDITGGRTPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            FAFEKFP ++  LTTQMKSVGE MA+GRT QESFQKALR LE G  G+   +      D 
Sbjct: 362  FAFEKFPAADDRLTTQMKSVGEVMAMGRTIQESFQKALRGLETGLCGFNPRS-----EDK 416

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
             +++  L  P P+RM  +  A + G   +EIHE+  ID WFL Q ++L+  E+ +    +
Sbjct: 417  AEIRRELANPGPERMLFVADAFRAGFTPEEIHEICAIDPWFLAQIEDLMKEEKSVSDGQL 476

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
             ++       +KR+GFSDK++A     +EKEVRE R +L + P YKR DTCAAEF   T 
Sbjct: 477  QDLDYAALRRLKRKGFSDKRLAQLLNVSEKEVREHRYALKLHPVYKRADTCAAEFATETA 536

Query: 627  YMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSN 686
            Y+YS+Y+ ECES P+ +KKV+ILGGGPNRIGQGIEFDYCC H + +L+ +G+ETIM+N N
Sbjct: 537  YLYSTYEEECESRPSDRKKVMILGGGPNRIGQGIEFDYCCVHAALALRESGFETIMVNCN 596

Query: 687  PETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHR 746
            PETVSTD+DTSDRLYFEPLT+EDVL ++  E P G+IV +GGQTPLKL+           
Sbjct: 597  PETVSTDFDTSDRLYFEPLTLEDVLEIVRTENPWGVIVHYGGQTPLKLA----------- 645

Query: 747  LPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEIG 806
              +A  +  V I GTS DSIDAAEDRERF  ++ +L + QP   IA +E +AL  A+EIG
Sbjct: 646  --NALVENGVNIIGTSADSIDAAEDRERFQKVLNDLGLRQPPNRIAHNEEEALVKAEEIG 703

Query: 807  YPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALAD 866
            YP+VVRPSYVLGGRAM+IV++ E L  Y+  AV+V  + PVL+D +L++AIE+DVD ++D
Sbjct: 704  YPLVVRPSYVLGGRAMQIVHSAEALQKYMREAVQVSEDSPVLLDFFLNNAIEVDVDCVSD 763

Query: 867  SCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNC 926
               +VVIGGIM+H+EQAG+HSGDS C +P  ++S    D I   T  +A  L V GLMN 
Sbjct: 764  G-KDVVIGGIMQHVEQAGIHSGDSGCSLPPYSLSEEIQDEIRRQTKAMAYALGVVGLMNV 822

Query: 927  QYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPKH 986
            Q+A+   G V++LE NPRASRTVPFVSKA G PLAK  A  M+G SL + G  KEV+P  
Sbjct: 823  QFAV-QDGVVFVLEVNPRASRTVPFVSKATGVPLAKVGARCMAGISLKEQGVEKEVVPDF 881

Query: 987  VSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVFL 1046
             +VKEAV PF KF G D +L PEMRSTGEVMG+  SF  A+ KAQ+ AG++L  +G +FL
Sbjct: 882  YAVKEAVFPFIKFPGVDTILSPEMRSTGEVMGVGASFGEAYYKAQLGAGERLNPTGKIFL 941

Query: 1047 SLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVAN 1106
            S+ +  K  + + AK F  +G+ I +T GTA +L   G+ V+ + K+ EGRPH GD + N
Sbjct: 942  SVREEDKERVIKTAKNFQALGYGICATRGTAQYLTEHGLIVQAINKVPEGRPHIGDALKN 1001

Query: 1107 GQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRS 1156
            G+I ++V T S D     D   +R+  L  +VP  TT +G  A +E  +S
Sbjct: 1002 GEIALVVNTVSSDPQSVSDSHIIRQSALQQRVPQYTTTAGGEAMSEGAKS 1051



 Score =  249 bits (636), Expect = 7e-63,   Method: Compositional matrix adjust.
 Identities = 151/422 (35%), Positives = 238/422 (56%), Gaps = 19/422 (4%)

Query: 62  RASSAKIDSSAELSNGAASSKDQKLGKRTDLRKILILGAGPIVIGQACEFDYSGTQACKA 121
           RA +   + + E +   ++ +++   + +D +K++ILG GP  IGQ  EFDY    A  A
Sbjct: 523 RADTCAAEFATETAYLYSTYEEECESRPSDRKKVMILGGGPNRIGQGIEFDYCCVHAALA 582

Query: 122 LKEEGYEVILINSNPATIMTDPGLADRTYITPMTPELVEQVLEKERPDALLPTMGGQTAL 181
           L+E G+E I++N NP T+ TD   +DR Y  P+T E V +++  E P  ++   GGQT L
Sbjct: 583 LRESGFETIMVNCNPETVSTDFDTSDRLYFEPLTLEDVLEIVRTENPWGVIVHYGGQTPL 642

Query: 182 NLAVALAESGALEKYGVELIGAKLDAIKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECI 241
            LA AL E+      GV +IG   D+I  AEDR+ F++ +  +G++ PP+ I +  +E +
Sbjct: 643 KLANALVEN------GVNIIGTSADSIDAAEDRERFQKVLNDLGLRQPPNRIAHNEEEAL 696

Query: 242 SIANEIGEFPLIIRPAFTLGGTGGGIAYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKE 301
             A EIG +PL++RP++ LGG    I ++ E  +   +  +  S  S VL++  L    E
Sbjct: 697 VKAEEIG-YPLVVRPSYVLGGRAMQIVHSAEALQKYMREAVQVSEDSPVLLDFFLNNAIE 755

Query: 302 YELEVMRDLADNVVIICSIENVDPMGVHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREI 361
            +++ + D  D VVI   +++V+  G+H+GDS    P  +L+++    +R  + A+   +
Sbjct: 756 VDVDCVSDGKD-VVIGGIMQHVEQAGIHSGDSGCSLPPYSLSEEIQDEIRRQTKAMAYAL 814

Query: 362 GVECGGSNVQFAVNPVDGEVMVIEMNPRVSRSSALASKATGFPIAKMAAKLSVGYSLDQI 421
           GV  G  NVQFAV   DG V V+E+NPR SR+    SKATG P+AK+ A+   G SL   
Sbjct: 815 GV-VGLMNVQFAVQ--DGVVFVLEVNPRASRTVPFVSKATGVPLAKVGARCMAGISL--- 868

Query: 422 PNDITKKTPASFEPSIDYVVTKIPRFAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQ 481
                K+     E   D+   K   F F KFPG + +L+ +M+S GE M +G +F E++ 
Sbjct: 869 -----KEQGVEKEVVPDFYAVKEAVFPFIKFPGVDTILSPEMRSTGEVMGVGASFGEAYY 923

Query: 482 KA 483
           KA
Sbjct: 924 KA 925


>gi|416255316|ref|ZP_11639153.1| carbamoyl-phosphate synthase, large subunit [Moraxella catarrhalis
            O35E]
 gi|326576363|gb|EGE26272.1| carbamoyl-phosphate synthase, large subunit [Moraxella catarrhalis
            O35E]
          Length = 1078

 Score = 1247 bits (3226), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 621/1079 (57%), Positives = 791/1079 (73%), Gaps = 34/1079 (3%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILI+GAGPIVIGQACEFDYSG QACKALKEEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIKSILIIGAGPIVIGQACEFDYSGAQACKALKEEGYRVILVNSNPATIMTDPSMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+T + VEQ++ KERPDA+LPTMGGQTALN A+ L + G L KYG ELIGA  +A
Sbjct: 63   ATYIEPITWQTVEQIIAKERPDAILPTMGGQTALNCALDLDKHGVLAKYGCELIGATKEA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I+KAEDR+LF +AMK IG++ P + I  ++D+  +I  ++G FP IIRP+FT+GG+GGGI
Sbjct: 123  IEKAEDRELFDKAMKKIGLECPKAEIAQSMDDAFAIQAKVG-FPCIIRPSFTMGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEF  IC+ G   S T Q+L+++SL+GWKEYE+EV+RD  DN +I+CSIEN DPMG
Sbjct: 182  AYNREEFIEICERGFDLSPTHQLLIDESLIGWKEYEMEVVRDKKDNCIIVCSIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ +R+ SIA++REIGVE GGSNVQF +NP  G ++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQIMRNASIAVLREIGVETGGSNVQFGINPKTGRMVVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT  KTPASFEP+IDYVVTK+PR
Sbjct: 302  PRVSRSSALASKATGFPIAKIAAKLAVGYTLDELKNDITGGKTPASFEPAIDYVVTKMPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            F FEKFP +E +LTTQMKSVGE MA+GR FQES QKALR LE G +G+     ++LD++ 
Sbjct: 362  FNFEKFPQAESVLTTQMKSVGEVMAIGRNFQESMQKALRGLEIGVAGFD----EQLDFEQ 417

Query: 507  EQ------LKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQF 560
                    LK  L+ P P+R+  I  A++ G+ VD++   + ID WFL Q ++++  E  
Sbjct: 418  NDDSIISTLKLKLKTPTPERIFYIADALRFGLSVDDVFADTNIDPWFLVQIEDIVHTENQ 477

Query: 561  LLTQSVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAE 620
            L T  + ++T +    +KR+G SD +IA     +EK+ R+ R ++G+ P YKRVDTCAAE
Sbjct: 478  LKTLGMGDLTPNLLRRLKRKGLSDARIAKLMGVSEKQFRKTRWNMGIYPVYKRVDTCAAE 537

Query: 621  FEANTPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYET 680
            FE +T YMYS+YD ECE+ P+ K K++++GGGPNRIGQGIEFDYCC H + +++  GYET
Sbjct: 538  FETSTAYMYSTYDEECEANPSNKDKIMVIGGGPNRIGQGIEFDYCCVHAALAMREDGYET 597

Query: 681  IMMNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQ 740
            IM+N NPETVSTDYDTSDRLYFEP+T+EDVL ++  E+P+G+IVQ+GGQTPLKL+  + Q
Sbjct: 598  IMVNCNPETVSTDYDTSDRLYFEPITLEDVLEIVRTEQPKGVIVQYGGQTPLKLARSLEQ 657

Query: 741  YLDEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALA 800
                           V I GTSPD+ID AEDRERF  +I +L++ QP   I KS  + + 
Sbjct: 658  -------------AGVPIIGTSPDAIDRAEDRERFLQMINKLNLRQPNNSIVKSSEEGIR 704

Query: 801  IAKEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEID 860
             A ++GYP+VVRPSYVLGGRAMEIVY ++ L  YL +AV+   E PVL+D +L DAIE+D
Sbjct: 705  EAAKVGYPLVVRPSYVLGGRAMEIVYNEDELKRYLRDAVQASHEAPVLLDHFLDDAIEVD 764

Query: 861  VDALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNV 920
            VD ++D    VVIGGIM+HIEQAGVHSGDSAC IP  ++S    D +   T+ +AK L V
Sbjct: 765  VDCVSDG-KEVVIGGIMQHIEQAGVHSGDSACSIPPYSLSDDIQDDMRRQTVAMAKELGV 823

Query: 921  CGLMNCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTK 980
             GLMN Q+AI     VY+LE NPRASRTVPFVSK IG  LAK AA  M+G++L +  FT+
Sbjct: 824  VGLMNVQFAIKGE-TVYVLEVNPRASRTVPFVSKCIGVSLAKVAARCMAGQTLAEQNFTQ 882

Query: 981  EVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQK--- 1037
            E++P H SVKEAV PF KF G D +LGPEM+STGEVMG+  +F  A+ KA + +G +   
Sbjct: 883  EIVPSHYSVKEAVFPFAKFPGVDPILGPEMKSTGEVMGVGQTFGEAYYKATLGSGDRLTG 942

Query: 1038 LPLSG---TVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMH 1094
            LP  G   TVF+S+ D  K  +  +AK     GF IV+T GT   L   G+A +RV K+ 
Sbjct: 943  LPQEGETKTVFISVRDSDKAGVVDVAKRLAGFGFNIVATGGTHDMLVGAGVACKRVNKVS 1002

Query: 1095 EGRPHAGDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEA 1153
            EGRPH  DM+ NGQI + + T+ G    + D   +RR  L  K+ V  T++   A  EA
Sbjct: 1003 EGRPHIVDMMKNGQIHLAINTTEGKQALK-DSFPIRREALQNKILVANTLNAGRAVCEA 1060


>gi|104780016|ref|YP_606514.1| carbamoyl phosphate synthase large subunit [Pseudomonas entomophila
            L48]
 gi|95109003|emb|CAK13699.1| carbamoyl-phosphate synthase, large subunit [Pseudomonas entomophila
            L48]
          Length = 1073

 Score = 1247 bits (3226), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 628/1089 (57%), Positives = 800/1089 (73%), Gaps = 30/1089 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILILGAGPIVIGQACEFDYSG QACKAL+EEG+ VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGFRVILVNSNPATIMTDPAMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  + V +++EKERPDA+LPTMGGQTALN A+ L   G LEK+GVE+IGA  D 
Sbjct: 63   ATYIEPIKWQSVAKIIEKERPDAVLPTMGGQTALNCALDLERHGVLEKFGVEMIGANADT 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  F +AMK IG++ P SGI ++++E  ++  ++G FP IIRP+FT+GGTGGGI
Sbjct: 123  IDKAEDRSRFDKAMKDIGLECPRSGIAHSMEEANAVLEKLG-FPCIIRPSFTMGGTGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEFE IC  GL  S T ++L+++SL+GWKEYE+EV+RD  DN +I+CSIEN DPMG
Sbjct: 182  AYNREEFEEICTRGLDLSPTKELLIDESLIGWKEYEMEVVRDKKDNCIIVCSIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGVE GGSNVQF + P  G ++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQIMRNASLAVLREIGVETGGSNVQFGICPNTGRMVVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL++GY+LD++ NDIT  +TPASFEPSIDYVVTK+PR
Sbjct: 302  PRVSRSSALASKATGFPIAKIAAKLAIGYTLDELQNDITGGRTPASFEPSIDYVVTKLPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            FAFEKFP ++  LTTQMKSVGE MA+GRTFQES QKALR LE G     C    ++D   
Sbjct: 362  FAFEKFPKADARLTTQMKSVGEVMAIGRTFQESLQKALRGLEVG----ACGLDPKVDLAS 417

Query: 507  EQ----LKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLL 562
             +    LK  L VP  +R+  +  AM+ GM  +EI  L+ ID WFL Q ++LI  E+ + 
Sbjct: 418  PEAASILKRELTVPGAERIWYVADAMRSGMTCEEIFALTGIDMWFLVQMEDLIKEEEKVK 477

Query: 563  TQSVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFE 622
            T ++S + KD    +KR+GFSD+++A     T+K +R  R  L V P YKRVDTCAAEF 
Sbjct: 478  TLALSAIDKDYMLRLKRKGFSDQRLAKLLGITDKNLRRHRHKLEVFPVYKRVDTCAAEFA 537

Query: 623  ANTPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIM 682
             +T Y+YS+Y+ ECE+ P+ + K++ILGGGPNRIGQGIEFDYCC H + +L+  GYETIM
Sbjct: 538  TDTAYLYSTYEEECEANPSTRDKIMILGGGPNRIGQGIEFDYCCVHAALALREDGYETIM 597

Query: 683  MNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYL 742
            +N NPETVSTDYDTSDRLYFEPLT+EDVL V  +E+P+G+IV +GGQTPLKL+    + L
Sbjct: 598  VNCNPETVSTDYDTSDRLYFEPLTLEDVLEVCRVEKPKGVIVHYGGQTPLKLA----RAL 653

Query: 743  DEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIA 802
            +E  +P         I GTSPD+ID AEDRERF  +++ L++ QP     +SE +A++ A
Sbjct: 654  EEAGVP---------IIGTSPDAIDRAEDRERFQQMVQRLNLLQPPNATVRSEEEAISAA 704

Query: 803  KEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVD 862
              IGYP+VVRPSYVLGGRAMEIVY  + L  YL  AV+V  + PVL+D +L+ AIE+DVD
Sbjct: 705  GGIGYPLVVRPSYVLGGRAMEIVYELDELKRYLREAVQVSNDSPVLLDHFLNCAIEMDVD 764

Query: 863  ALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCG 922
            A+ D   +VVIG IM+HIEQAGVHSGDSAC +P  ++S    D +     K+A  L V G
Sbjct: 765  AVCDGT-DVVIGAIMQHIEQAGVHSGDSACSLPPYSLSQEVQDEVRVQVKKMALELGVVG 823

Query: 923  LMNCQYAITTSGD-VYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKE 981
            LMN Q A+   GD +Y++E NPRASRTVPFVSK IG  LA  AA VM+GK+L +LGFT+E
Sbjct: 824  LMNVQLAL--QGDKIYVIEVNPRASRTVPFVSKCIGTSLAMIAARVMAGKTLKELGFTQE 881

Query: 982  VIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLS 1041
            +IP   SVKEAV PF KF G D +LGPEM+STGEVMG+  SF  AFAKAQ+ A + LP  
Sbjct: 882  IIPNFYSVKEAVFPFAKFPGVDPILGPEMKSTGEVMGVGDSFGEAFAKAQMGASEVLPTG 941

Query: 1042 GTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAG 1101
            GT F+S+ D  KP +  +A+  + +GF++V+T+GTA  +E  G+ V RV K+ EGRPH  
Sbjct: 942  GTAFISVRDDDKPQVAGVARDLIALGFEVVATAGTAKVIEAAGLKVRRVNKVTEGRPHVV 1001

Query: 1102 DMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNT 1161
            DM+ N ++ +++ T+ G      D   +RR  L +K+   TT++   A  EA++     T
Sbjct: 1002 DMIKNDEVSLIINTTEGRQ-SIADSYSIRRNALQHKIYCTTTIAAGEAICEALKFGPEKT 1060

Query: 1162 VTMTALQDF 1170
            V    LQD 
Sbjct: 1061 VRR--LQDL 1067


>gi|418694587|ref|ZP_13255622.1| carbamoyl-phosphate synthase, large subunit [Leptospira kirschneri
            str. H1]
 gi|421106937|ref|ZP_15567500.1| carbamoyl-phosphate synthase, large subunit [Leptospira kirschneri
            str. H2]
 gi|409957526|gb|EKO16432.1| carbamoyl-phosphate synthase, large subunit [Leptospira kirschneri
            str. H1]
 gi|410008031|gb|EKO61707.1| carbamoyl-phosphate synthase, large subunit [Leptospira kirschneri
            str. H2]
          Length = 1106

 Score = 1246 bits (3225), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 636/1119 (56%), Positives = 807/1119 (72%), Gaps = 58/1119 (5%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            +R ++R +LILG+GPIVIGQACEFDYSGTQA KALKE+G  VIL+NSNPATIMTDP LAD
Sbjct: 3    RRENIRSVLILGSGPIVIGQACEFDYSGTQAAKALKEKGIRVILLNSNPATIMTDPDLAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TY+ PMT  +V+++LEKE+PDA+LPT+GGQTALNLA+A   +G LEKY VELIGAK+DA
Sbjct: 63   ATYVEPMTVPVVQKILEKEKPDAILPTVGGQTALNLALACNSAGILEKYNVELIGAKVDA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            IKKAEDR+LFK+AM+ IGV+ P SG+ N L +   I N++G  PLI+RPAFTLGGTGGGI
Sbjct: 123  IKKAEDRELFKKAMEKIGVRVPASGLANNLKDAFEIKNKLG-LPLIVRPAFTLGGTGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AY +E FE +   GL AS  SQVL+E+S+LGWKE+ELEVMRDLADNVVIICSIEN+DPMG
Sbjct: 182  AYTEETFEEVVSKGLKASPISQVLLEESVLGWKEFELEVMRDLADNVVIICSIENIDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAP QTL+DKEYQ LRD SI+IIREIGVE GGSN+QFAVNP +G+V+VIEMN
Sbjct: 242  VHTGDSITVAPQQTLSDKEYQNLRDMSISIIREIGVETGGSNIQFAVNPANGDVIVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRF 447
            PRVSRSSALASKATGFPIAK+AA LS+GY+LD+I NDIT+ TPASFEPSIDYVVTK+PRF
Sbjct: 302  PRVSRSSALASKATGFPIAKIAALLSIGYTLDEIKNDITRVTPASFEPSIDYVVTKVPRF 361

Query: 448  AFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSN-VKEL---- 502
            AFEKFPG++  L  QMK+VGEAMA+GRTF+ESFQKALRSLE    G+G     +EL    
Sbjct: 362  AFEKFPGTDDTLGVQMKAVGEAMAIGRTFKESFQKALRSLEIDRYGFGSDGYFQELLYSR 421

Query: 503  ----DWDWEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVE 558
                D   E +   L+ PN  R+  +  A  +G  VD+IH+L  +D+WFL Q ++L+ +E
Sbjct: 422  SLNNDQRKEWIDSHLKRPNDKRIFYVKLAFDEGYTVDQIHDLCKMDRWFLWQMEDLLKLE 481

Query: 559  QFLLTQSVSNMTKDDFYEVKRRGFSDKQIAFAT--------------------------K 592
            +    +  S ++K     +KR GFS++Q++F                            K
Sbjct: 482  REYSEKGNSILSK-----MKRAGFSNRQLSFLKNKKQILDLLDGNLRVDLKKTEIQNLLK 536

Query: 593  STEKEVREKRLSLGVIPSYKRVDTCAAEFEANTPYMYSSYDFECESAPTQKKKVLILGGG 652
             TE E+  +  +  ++P YKR+DTCA EFEA TPY YSSYD E ES  T  K V+ILGGG
Sbjct: 537  KTEDEIEAELGAKKILPVYKRIDTCAGEFEAYTPYFYSSYDDEDESDVTNAKSVMILGGG 596

Query: 653  PNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSNPETVSTDYDTSDRLYFEPLTVEDVLN 712
            PNRIGQGIEFDYCCC  S++LQ  G E+IM+NSNPETVSTDYDTSDRLYFEPLT+EDV  
Sbjct: 597  PNRIGQGIEFDYCCCQASYALQDLGIESIMINSNPETVSTDYDTSDRLYFEPLTLEDVYR 656

Query: 713  VIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHRLPSASGDGLVRIWGTSPDSIDAAEDR 772
            +   E+PEG+I+QFGGQTPLKL+  + +           G   V+I GTSPDSID AEDR
Sbjct: 657  IYQNEKPEGVIIQFGGQTPLKLAKDLEK----------KG---VKILGTSPDSIDRAEDR 703

Query: 773  ERFNAIIKELSIEQPKGGIAKSEADALAIAKEIGYPVVVRPSYVLGGRAMEIVYTDETLV 832
            +RF  ++++L +  P+ GIA S  +A  IA +IGYPV+VRPSYVLGGRAM I+  ++ L 
Sbjct: 704  KRFIEVLEKLKLNSPESGIATSMEEAREIAHKIGYPVLVRPSYVLGGRAMLIINEEKELD 763

Query: 833  TYLENAVEVDPERPVLIDKYLSDAIEIDVDALADSCGNVVIGGIMEHIEQAGVHSGDSAC 892
             Y+E A E+  +RP+LID +L DA+E+DVDAL D    V + GIMEHIE+AGVHSGDSAC
Sbjct: 764  RYMEKAEEISKDRPLLIDSFLEDAVEVDVDALCDG-EEVFVTGIMEHIEEAGVHSGDSAC 822

Query: 893  MIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNCQYAITTSGDVYLLEANPRASRTVPFV 952
            ++P +T+S + +D I   T+ LA  L V GL+N QYA+     +Y++E NPRASRTVPFV
Sbjct: 823  VLPPQTLSKNMMDEIRKATVNLALELQVKGLINIQYAVKNE-ILYIIEVNPRASRTVPFV 881

Query: 953  SKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRS 1012
            SKA+GHP+ KYA  +M G+SL +L   KE+    VSVKE VLPF KF G D +LGPEMRS
Sbjct: 882  SKALGHPIVKYATRIMMGESLKNLPLPKEMAFSQVSVKEVVLPFNKFPGVDTILGPEMRS 941

Query: 1013 TGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVFLSLNDLTKPHLERIAKAFLDIGFKIVS 1072
            TGEVMGI  +   AF K+Q  AG +LP  GTVF+S+ND TK  L    K   ++GF +++
Sbjct: 942  TGEVMGIASTAGEAFLKSQYMAGDELPSQGTVFVSINDKTKAELLSYIKDLSELGFNLIA 1001

Query: 1073 TSGTAHFLELKGIAVERVLKMHEGR-PHAGDMVANGQIQMMVITSSGDSLDQIDGLKLRR 1131
            TSGT  FL   GI   ++ K+++G  P A D +   +I  ++I +    + + D   +R+
Sbjct: 1002 TSGTHKFLSDNGILSSKINKVYDGVFPTALDYIRENKIH-LIINTPLSRVTRDDSFTIRQ 1060

Query: 1132 RGLAYKVPVITTVSGALANAEAIRSLKSNTVTMTALQDF 1170
              + +KVP +TT + A A  + +  +K+   T+ +LQ+ 
Sbjct: 1061 AAIRFKVPCLTTSNAAKALIKGMVEMKNKGFTIHSLQEI 1099



 Score =  231 bits (588), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 142/406 (34%), Positives = 228/406 (56%), Gaps = 21/406 (5%)

Query: 79  ASSKDQKLGKRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPAT 138
           +S  D+     T+ + ++ILG GP  IGQ  EFDY   QA  AL++ G E I+INSNP T
Sbjct: 574 SSYDDEDESDVTNAKSVMILGGGPNRIGQGIEFDYCCCQASYALQDLGIESIMINSNPET 633

Query: 139 IMTDPGLADRTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGV 198
           + TD   +DR Y  P+T E V ++ + E+P+ ++   GGQT L LA        LEK GV
Sbjct: 634 VSTDYDTSDRLYFEPLTLEDVYRIYQNEKPEGVIIQFGGQTPLKLA------KDLEKKGV 687

Query: 199 ELIGAKLDAIKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAF 258
           +++G   D+I +AEDR  F + ++ + + +P SGI  +++E   IA++IG +P+++RP++
Sbjct: 688 KILGTSPDSIDRAEDRKRFIEVLEKLKLNSPESGIATSMEEAREIAHKIG-YPVLVRPSY 746

Query: 259 TLGGTGGGIAYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIIC 318
            LGG    I   ++E +   +     S    +L++  L    E +++ + D  + V +  
Sbjct: 747 VLGGRAMLIINEEKELDRYMEKAEEISKDRPLLIDSFLEDAVEVDVDALCD-GEEVFVTG 805

Query: 319 SIENVDPMGVHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVD 378
            +E+++  GVH+GDS  V P QTL+      +R  ++ +  E+ V+ G  N+Q+AV    
Sbjct: 806 IMEHIEEAGVHSGDSACVLPPQTLSKNMMDEIRKATVNLALELQVK-GLINIQYAVK--- 861

Query: 379 GEVM-VIEMNPRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSI 437
            E++ +IE+NPR SR+    SKA G PI K A ++ +G SL  +P     K  A  + S+
Sbjct: 862 NEILYIIEVNPRASRTVPFVSKALGHPIVKYATRIMMGESLKNLP---LPKEMAFSQVSV 918

Query: 438 DYVVTKIPRFAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKA 483
             VV       F KFPG + +L  +M+S GE M +  T  E+F K+
Sbjct: 919 KEVV-----LPFNKFPGVDTILGPEMRSTGEVMGIASTAGEAFLKS 959


>gi|296113339|ref|YP_003627277.1| carbamoyl-phosphate synthase large subunit [Moraxella catarrhalis
            RH4]
 gi|295921033|gb|ADG61384.1| carbamoyl-phosphate synthase large chain [Moraxella catarrhalis
            BBH18]
          Length = 1078

 Score = 1246 bits (3225), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 621/1079 (57%), Positives = 791/1079 (73%), Gaps = 34/1079 (3%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILI+GAGPIVIGQACEFDYSG QACKALKEEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIKSILIIGAGPIVIGQACEFDYSGAQACKALKEEGYRVILVNSNPATIMTDPSMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+T + VEQ++ KERPDA+LPTMGGQTALN A+ L + G L KYG ELIGA  +A
Sbjct: 63   ATYIEPITWQTVEQIIAKERPDAILPTMGGQTALNCALDLDKHGVLAKYGCELIGATKEA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I+KAEDR+LF +AMK IG++ P + I  ++D+  +I  ++G FP IIRP+FT+GG+GGGI
Sbjct: 123  IEKAEDRELFDKAMKKIGLECPKAEIAQSMDDAFAIQAKVG-FPCIIRPSFTMGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEF  IC+ G   S T Q+L+++SL+GWKEYE+EV+RD  DN +I+CSIEN DPMG
Sbjct: 182  AYNREEFIEICERGFDLSPTHQLLIDESLIGWKEYEMEVVRDKKDNCIIVCSIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ +R+ SIA++REIGVE GGSNVQF +NP  G ++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQIMRNASIAVLREIGVETGGSNVQFGINPKTGRMVVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT  KTPASFEP+IDYVVTK+PR
Sbjct: 302  PRVSRSSALASKATGFPIAKIAAKLAVGYTLDELKNDITGGKTPASFEPAIDYVVTKMPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            F FEKFP +E +LTTQMKSVGE MA+GR FQES QKALR LE G +G+     ++LD++ 
Sbjct: 362  FNFEKFPQAESVLTTQMKSVGEVMAIGRNFQESMQKALRGLEIGVAGFD----EQLDFEQ 417

Query: 507  EQ------LKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQF 560
                    LK  L+ P P+R+  I  A++ G+ VD++   + ID WFL Q ++++  E  
Sbjct: 418  NDDSIISTLKLKLKTPTPERIFYIADALRFGLSVDDVFADTNIDPWFLVQIEDIVHTENQ 477

Query: 561  LLTQSVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAE 620
            L T  + ++T +    +KR+G SD +IA     +EK+ R+ R ++G+ P YKRVDTCAAE
Sbjct: 478  LKTLGMGDLTPNLLRRLKRKGLSDARIAKLMGVSEKQFRKTRWNMGIYPVYKRVDTCAAE 537

Query: 621  FEANTPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYET 680
            FE +T YMYS+YD ECE+ P+ K K++++GGGPNRIGQGIEFDYCC H + +++  GYET
Sbjct: 538  FETSTAYMYSTYDEECEANPSNKDKIMVIGGGPNRIGQGIEFDYCCVHAALAMREDGYET 597

Query: 681  IMMNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQ 740
            IM+N NPETVSTDYDTSDRLYFEP+T+EDVL ++  E+P+G+IVQ+GGQTPLKL+  + Q
Sbjct: 598  IMVNCNPETVSTDYDTSDRLYFEPITLEDVLEIVRTEQPKGVIVQYGGQTPLKLARSLEQ 657

Query: 741  YLDEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALA 800
                           V I GTSPD+ID AEDRERF  +I +L++ QP   I KS  + + 
Sbjct: 658  -------------AGVPIIGTSPDAIDRAEDRERFLQMINKLNLRQPNNSIVKSSEEGIR 704

Query: 801  IAKEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEID 860
             A ++GYP+VVRPSYVLGGRAMEIVY ++ L  YL +AV+   E PVL+D +L DAIE+D
Sbjct: 705  EAAKVGYPLVVRPSYVLGGRAMEIVYNEDELKRYLRDAVQASHEAPVLLDHFLDDAIEVD 764

Query: 861  VDALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNV 920
            VD ++D    VVIGGIM+HIEQAGVHSGDSAC IP  ++S    D +   T+ +AK L V
Sbjct: 765  VDCVSDG-KEVVIGGIMQHIEQAGVHSGDSACSIPPYSLSDDIQDDMRRQTVAMAKELGV 823

Query: 921  CGLMNCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTK 980
             GLMN Q+AI     VY+LE NPRASRTVPFVSK IG  LAK AA  M+G++L +  FT+
Sbjct: 824  VGLMNVQFAIKGE-TVYVLEVNPRASRTVPFVSKCIGVSLAKVAARCMAGQTLAEQNFTQ 882

Query: 981  EVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQK--- 1037
            E++P H SVKEAV PF KF G D +LGPEM+STGEVMG+  +F  A+ KA + +G +   
Sbjct: 883  EIVPSHYSVKEAVFPFAKFPGVDPILGPEMKSTGEVMGVGQTFGEAYYKATLGSGDRLTG 942

Query: 1038 LPLSG---TVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMH 1094
            LP  G   TVF+S+ D  K  +  +AK     GF IV+T GT   L   G+A +RV K+ 
Sbjct: 943  LPQEGETKTVFISVRDSDKAGVVDVAKRLAGFGFNIVATGGTHDMLVGAGVACKRVNKVS 1002

Query: 1095 EGRPHAGDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEA 1153
            EGRPH  DM+ NGQI + + T+ G    + D   +RR  L  K+ V  T++   A  EA
Sbjct: 1003 EGRPHIVDMMKNGQIHLAINTTEGKQALK-DSFPIRREALQNKILVANTLNAGRAVCEA 1060


>gi|418701957|ref|ZP_13262875.1| carbamoyl-phosphate synthase, large subunit [Leptospira interrogans
            serovar Bataviae str. L1111]
 gi|410759089|gb|EKR25308.1| carbamoyl-phosphate synthase, large subunit [Leptospira interrogans
            serovar Bataviae str. L1111]
          Length = 1106

 Score = 1246 bits (3225), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 638/1119 (57%), Positives = 805/1119 (71%), Gaps = 58/1119 (5%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            +R D+R +LILG+GPIVIGQACEFDYSGTQA KALKE+G  VIL+NSNPATIMTDP LAD
Sbjct: 3    RREDIRSVLILGSGPIVIGQACEFDYSGTQAAKALKEKGIRVILLNSNPATIMTDPDLAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TY+ PMT  +V+++LEKE+PDA+LPT+GGQTALNLA+A   +G LEKY VELIGAK+DA
Sbjct: 63   ATYVEPMTVPVVQKILEKEKPDAILPTVGGQTALNLALACNSAGILEKYNVELIGAKVDA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            IKKAEDR+LFK+AM+ IGV+ P SG+ N L + + I N++G  PLI+RPAFTLGGTGGGI
Sbjct: 123  IKKAEDRELFKKAMEKIGVRVPASGLANNLKDAVEIKNKLG-LPLIVRPAFTLGGTGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AY +E FE +   GL AS  SQVL+E+S+LGWKE+ELEVMRDLADNVVIICSIEN+DPMG
Sbjct: 182  AYTEETFEEVVSKGLKASPISQVLLEESVLGWKEFELEVMRDLADNVVIICSIENIDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAP QTL+DKEYQ LRD SIAIIREIGVE GGSN+QFAVNP +G+V+VIEMN
Sbjct: 242  VHTGDSITVAPQQTLSDKEYQNLRDMSIAIIREIGVETGGSNIQFAVNPTNGDVIVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRF 447
            PRVSRSSALASKATGFPIAK+AA LS+GY+LD+I NDIT+ TPASFEPSIDYVVTK+PRF
Sbjct: 302  PRVSRSSALASKATGFPIAKIAALLSIGYTLDEIKNDITRVTPASFEPSIDYVVTKVPRF 361

Query: 448  AFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSN-VKEL---- 502
            AFEKFPG++  L  QMK+VGEAMA+GRTF+ESFQKALRSLE    G+G     +EL    
Sbjct: 362  AFEKFPGTDDTLGVQMKAVGEAMAIGRTFKESFQKALRSLEIDRYGFGSDGYFQELLYSR 421

Query: 503  ----DWDWEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVE 558
                D   E +   L+ PN  R+  +  A  +G  VD+IH+L  ID+WFL Q + L+ +E
Sbjct: 422  SLNNDQRKEWIDSHLKRPNDKRIFYVKLAFDEGYTVDQIHDLCKIDRWFLWQMEGLLKLE 481

Query: 559  QFLLTQSVSNMTKDDFYEVKRRGFSDKQIAFAT--------------------------K 592
                 +  S       Y++K+ GFS++Q++F                            K
Sbjct: 482  -----KEYSEKGNSILYKMKQVGFSNRQLSFLKNKKQILDLLDGNLRVDLKKTEIQNLLK 536

Query: 593  STEKEVREKRLSLGVIPSYKRVDTCAAEFEANTPYMYSSYDFECESAPTQKKKVLILGGG 652
             +E+E+  +  S  ++P YKR+DTCA EFEA TPY YSSYD E ES  T  K V+ILGGG
Sbjct: 537  LSEEEIEVELGSKKILPVYKRIDTCAGEFEAYTPYFYSSYDEEDESDVTNAKSVMILGGG 596

Query: 653  PNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSNPETVSTDYDTSDRLYFEPLTVEDVLN 712
            PNRIGQGIEFDYCCC  S++LQ  G E+IM+NSNPETVSTDYDTSDRLYFEPLT+EDV  
Sbjct: 597  PNRIGQGIEFDYCCCQASYALQDLGIESIMINSNPETVSTDYDTSDRLYFEPLTLEDVYR 656

Query: 713  VIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHRLPSASGDGLVRIWGTSPDSIDAAEDR 772
            +   E+PEG+I+QFGGQTPLKL+  + +           G   V+I GTSPDSID AEDR
Sbjct: 657  IYQNEKPEGVIIQFGGQTPLKLAKDLEK----------KG---VKILGTSPDSIDRAEDR 703

Query: 773  ERFNAIIKELSIEQPKGGIAKSEADALAIAKEIGYPVVVRPSYVLGGRAMEIVYTDETLV 832
            +RF  ++++L +  P+ GIA S  +A  IA +IGYPV+VRPSYVLGGRAM I+  ++ L 
Sbjct: 704  KRFVEVLEKLKLNSPESGIATSMEEAREIAHKIGYPVLVRPSYVLGGRAMLIINEEKELD 763

Query: 833  TYLENAVEVDPERPVLIDKYLSDAIEIDVDALADSCGNVVIGGIMEHIEQAGVHSGDSAC 892
             Y+E A E+  +RP+LID +L DAIE+DVDAL D    V + GIMEHIE+AG+HSGDSAC
Sbjct: 764  RYMEKAEEISRDRPLLIDSFLEDAIEVDVDALCDG-KEVFVTGIMEHIEEAGIHSGDSAC 822

Query: 893  MIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNCQYAITTSGDVYLLEANPRASRTVPFV 952
            ++P +T+S + +D I   T+ LA  L V GL+N QYA+     +Y++EANPRASRTVPFV
Sbjct: 823  VLPPQTLSKNMMDEIRKATVNLALELQVKGLINIQYAVKNE-ILYIIEANPRASRTVPFV 881

Query: 953  SKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRS 1012
            SKA+GHP+ KYA  +M G+ L  L   KE+    VSVKE VLPF KF G D +LGPEMRS
Sbjct: 882  SKALGHPIVKYATRIMMGEPLKSLPLPKEMEFSQVSVKEVVLPFNKFPGVDTILGPEMRS 941

Query: 1013 TGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVFLSLNDLTKPHLERIAKAFLDIGFKIVS 1072
            TGEVMGI  +   AF K+Q  AG +LP  GTVF+S+ND TK  L    K   ++GF +++
Sbjct: 942  TGEVMGIASTAGEAFLKSQYMAGDELPSQGTVFVSINDKTKAELLSYIKDLSELGFNLIA 1001

Query: 1073 TSGTAHFLELKGIAVERVLKMHEG-RPHAGDMVANGQIQMMVITSSGDSLDQIDGLKLRR 1131
            TSGT  FL   GI   ++ K+++G  P A D +   +I  ++I +    + + D   +R+
Sbjct: 1002 TSGTHKFLSDNGILSSKINKVYDGIFPTALDYIRENKIH-LIINTPLSRVTRDDSFTIRQ 1060

Query: 1132 RGLAYKVPVITTVSGALANAEAIRSLKSNTVTMTALQDF 1170
              + +KVP +TT + A A  + +  +K+   T+ +LQ+ 
Sbjct: 1061 AAIRFKVPCLTTSNAAKALIKGMVEMKNKGFTIHSLQEI 1099


>gi|328952761|ref|YP_004370095.1| carbamoyl-phosphate synthase large subunit [Desulfobacca acetoxidans
            DSM 11109]
 gi|328453085|gb|AEB08914.1| carbamoyl-phosphate synthase, large subunit [Desulfobacca acetoxidans
            DSM 11109]
          Length = 1080

 Score = 1246 bits (3225), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 632/1090 (57%), Positives = 808/1090 (74%), Gaps = 24/1090 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++KILI+G+GPI+I QACEFDYSG QACKALKEEG+EV+LINSNPATIMTDP +AD
Sbjct: 3    KRTDIKKILIIGSGPIIISQACEFDYSGVQACKALKEEGFEVVLINSNPATIMTDPEIAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
            RTYI P+TPE+V +++E+ERPDA+LPT+GGQT LN AVA+A++G L++ GVE+IGA  + 
Sbjct: 63   RTYIEPITPEMVCKIIERERPDAILPTLGGQTGLNCAVAVADTGILKRLGVEMIGASPEV 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            IKKAEDR LF+ AM  I ++ P S I  ++ E +  A E+  +P+I+RP+FTLGGTGGGI
Sbjct: 123  IKKAEDRQLFRDAMANINLRVPTSVIVRSMAEVLE-APEVLSYPIIVRPSFTLGGTGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN E+ + +   GL AS+  +V++E+S+LGWKE+ELEVMRD+ DNVVIICSIEN+DPMG
Sbjct: 182  AYNLEDLKELSAYGLEASMIQEVMLEESVLGWKEFELEVMRDVKDNVVIICSIENLDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTL+D+EYQR+RD S+AIIREIGVE GGSN+QFAV P  GE++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLSDREYQRMRDASLAIIREIGVETGGSNIQFAVQPQTGEMVVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRF 447
            PRVSRSSALASKATGFPIAK+AAKL+VG++LD+IPNDITK+T ASFEPSIDY V KIPR+
Sbjct: 302  PRVSRSSALASKATGFPIAKIAAKLAVGFTLDEIPNDITKETYASFEPSIDYCVVKIPRW 361

Query: 448  AFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDWE 507
             FEKFPG+E LLTT MKSVGE MA+GRTF+E+ QK LRSLE    G G       +  WE
Sbjct: 362  TFEKFPGAEDLLTTSMKSVGEVMAIGRTFKEALQKGLRSLEISRFGLGADGKDIKEQPWE 421

Query: 508  QLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV- 566
             +   LR PN  R+  +  A ++GM + E++EL+ ID WFL+Q ++++     L +  + 
Sbjct: 422  IMLDRLRTPNSQRLFYLRQAFRQGMSIPEVYELTKIDSWFLSQIRDMVQFSDELASYGIL 481

Query: 567  --SNMTKDDFYEVKRR----GFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAE 620
                       E+ RR    GFSD Q+A     TE+++R  RL   + P YK VDTCAAE
Sbjct: 482  LQQGREGPHLAEMLRRAKEFGFSDVQLAHLWGLTEEKIRRLRLDYDIRPVYKLVDTCAAE 541

Query: 621  FEANTPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYET 680
            FEA TPY YS+Y+ E ES  +++ KV+ILGGGPNRIGQGIEFDYCCCH SF+L+  G E+
Sbjct: 542  FEAYTPYYYSTYEVEDESRRSERSKVVILGGGPNRIGQGIEFDYCCCHASFALKEMGIES 601

Query: 681  IMMNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQ 740
            IM+NSNPETVSTDYDTSD+L+FEPLT EDVLN+I  E+P G+IVQFGGQTPL L++P+ Q
Sbjct: 602  IMVNSNPETVSTDYDTSDKLFFEPLTREDVLNIIASEKPLGLIVQFGGQTPLNLAVPLAQ 661

Query: 741  YLDEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALA 800
                      +G    +I GTSPD+ID AEDRERF  ++  L + QP  G A S A AL 
Sbjct: 662  ----------AG---AKILGTSPDAIDRAEDRERFKRLLSGLKLRQPDNGTAASTAQALK 708

Query: 801  IAKEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEID 860
            IAK+IGYPVVVRPSYVLGGRAM+IV  D  L  ++  A+E  PE P+LIDK+L DAIE+D
Sbjct: 709  IAKQIGYPVVVRPSYVLGGRAMQIVADDRVLANFMSWALEASPEHPILIDKFLEDAIEVD 768

Query: 861  VDALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNV 920
            VDA+AD     +IGGIMEHIE+AG+HSGDSAC++P  ++  + L  I+  T  LA  L V
Sbjct: 769  VDAIADG-KTTIIGGIMEHIEEAGIHSGDSACVLPPYSLPPAILKEITRQTQALAAELGV 827

Query: 921  CGLMNCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTK 980
             GLMN Q+A+   G VY+LE NPRASRT+PFVSKA G PLAK A  VM G +L++LGFT+
Sbjct: 828  VGLMNIQFAV-KDGQVYILEVNPRASRTIPFVSKATGVPLAKLATKVMLGATLDELGFTR 886

Query: 981  EVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPL 1040
            +  P + +VKEAV PF +F G D LLGPEMRSTGEVMG+D +F ++FAK+QIAAGQ+LPL
Sbjct: 887  QAKPPYFAVKEAVFPFRRFPGVDPLLGPEMRSTGEVMGLDENFALSFAKSQIAAGQQLPL 946

Query: 1041 SGTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHA 1100
             G V  S+ +  KP L  I + F  +GF++++T GTA +L   G+ V  V K+  GRP+ 
Sbjct: 947  EGGVLFSVKNSDKPALLEIVRGFQKLGFELLATQGTADYLCQHGVKVAMVHKIRAGRPNI 1006

Query: 1101 GDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSN 1160
             D + +  I +++ T  G      D   +RR  L Y +P  TT++ A A  EAIR++K+ 
Sbjct: 1007 IDRIKSQDIALLINTPQGRYTTD-DSFSIRRTALEYDIPYTTTIAAARATLEAIRAVKTG 1065

Query: 1161 TVTMTALQDF 1170
             +T+ +LQ++
Sbjct: 1066 QLTVKSLQEY 1075


>gi|149375766|ref|ZP_01893534.1| Carbamoylphosphate synthase large subunit [Marinobacter algicola
            DG893]
 gi|149359891|gb|EDM48347.1| Carbamoylphosphate synthase large subunit [Marinobacter algicola
            DG893]
          Length = 1071

 Score = 1246 bits (3225), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 622/1084 (57%), Positives = 801/1084 (73%), Gaps = 20/1084 (1%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILILGAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPVMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+T + V +++EKE+PDALLPTMGGQTALN A+ L + G L ++GVE+IGA  D 
Sbjct: 63   ATYIEPITWKTVAKIIEKEQPDALLPTMGGQTALNCALDLEKHGVLAEHGVEMIGANADT 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDRD F +AMK IG++ P + I +++ E   +AN+IG FP IIRP+FT+GG+GGGI
Sbjct: 123  IDKAEDRDRFDKAMKKIGLECPRATIAHSMAEAWEVANDIG-FPCIIRPSFTMGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN++EFE IC  GL  S T+++L+++SL+GWKEYE+EV+RD  DN +I+C+IEN D MG
Sbjct: 182  AYNRDEFEEICTRGLDLSPTNELLIDESLIGWKEYEMEVVRDKNDNCIIVCAIENFDAMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGVE GGSNVQF VNP +G V+VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQIMRNASLAVLREIGVETGGSNVQFGVNPDNGRVVVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKK-TPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ N+IT   TPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGYTLDELRNEITGGVTPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            F FEKFP ++  LTTQMKSVGE MA+GRTFQES QKA+R LE G  G+            
Sbjct: 362  FTFEKFPQADARLTTQMKSVGEVMAIGRTFQESLQKAMRGLEVGSDGFEEKVDLNTTDGQ 421

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
            E L   L VP  +R+  I  A + GM V+E+   + +D W+L Q ++LI  E  L +   
Sbjct: 422  ETLTQELNVPGAERLWYIGDAFRAGMTVEEVFNNTHVDPWYLVQIEDLIKEEAALKSAGK 481

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
            +++ +D  + +KR+GFSD ++A     +E  +R+ R  L + P YKRVDTCAAEF ++T 
Sbjct: 482  ADIDRDTLFRLKRKGFSDARLAKLLSISEVSLRKLRHDLDIRPVYKRVDTCAAEFASSTA 541

Query: 627  YMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSN 686
            YMYSSY+ ECE+  + ++K++++GGGPNRIGQGIEFDYCC H + +++  GYETIM+N N
Sbjct: 542  YMYSSYEEECEADVSGREKIVVIGGGPNRIGQGIEFDYCCVHAALAMRDDGYETIMINCN 601

Query: 687  PETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHR 746
            PETVSTDYDTSDRLYFEP+T+EDVL +I +E+P+G+IVQ+GGQTPLKL+          R
Sbjct: 602  PETVSTDYDTSDRLYFEPITLEDVLEIIHVEKPKGVIVQYGGQTPLKLA----------R 651

Query: 747  LPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEIG 806
               A+G   V I GTSPD+ID AEDRERF  +I  L + QP+    +S  + +  A+EIG
Sbjct: 652  GLEAAG---VPIIGTSPDAIDRAEDRERFQQMIGRLGLIQPENATVRSHEEGILAAREIG 708

Query: 807  YPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALAD 866
            YP+VVRPSYVLGGRAMEIVY +E LV Y+ NAV V  + PVL+D +L+ AIE+D+DA++D
Sbjct: 709  YPLVVRPSYVLGGRAMEIVYDEEELVRYMRNAVLVSNDSPVLLDHFLNAAIEVDIDAISD 768

Query: 867  SCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNC 926
               +VVIGGIM+HIEQAGVHSGDSAC +P  T+     D +     K+A  L+V GLMN 
Sbjct: 769  G-KDVVIGGIMQHIEQAGVHSGDSACSLPPYTLPKDVQDEMREAVRKMAIELDVIGLMNV 827

Query: 927  QYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPKH 986
            Q A    G +Y++E NPRASRTVPFVSKAIG  LAK AA  M+G SL + GFT+E++P +
Sbjct: 828  QLA-WQGGQIYVIEVNPRASRTVPFVSKAIGVSLAKVAARCMAGTSLAEQGFTQEIVPTY 886

Query: 987  VSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVFL 1046
             SVKE+V PF KF   D +LGPEM+STGEVMGI  SF  AFAKA +A+G++LP  GT F+
Sbjct: 887  YSVKESVFPFNKFPAVDPILGPEMKSTGEVMGIGDSFDEAFAKAALASGERLPAKGTAFM 946

Query: 1047 SLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVAN 1106
            S+ D+ KP   ++A+  +D GFK+++T+GTA  L+  G+ V+RV K+ EGRPH  D + N
Sbjct: 947  SVRDVDKPGAAKVAQDLIDAGFKVIATTGTAKALKQAGLTVDRVNKVREGRPHIVDAIKN 1006

Query: 1107 GQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTVTMTA 1166
            GQ+Q+++ T+ G      D  ++R+  L  KV   TT++G  A   AI+     TV    
Sbjct: 1007 GQVQLIINTTEGRKAIS-DSAQIRQSALQTKVTYTTTLAGGEAFCRAIKFGPERTVRR-- 1063

Query: 1167 LQDF 1170
            LQD 
Sbjct: 1064 LQDL 1067


>gi|254492955|ref|ZP_05106126.1| carbamoyl-phosphate synthase subunit large chain [Neisseria
            gonorrhoeae 1291]
 gi|268598207|ref|ZP_06132374.1| carbamoyl-phosphate synthase subunit large [Neisseria gonorrhoeae
            MS11]
 gi|226511995|gb|EEH61340.1| carbamoyl-phosphate synthase subunit large chain [Neisseria
            gonorrhoeae 1291]
 gi|268582338|gb|EEZ47014.1| carbamoyl-phosphate synthase subunit large [Neisseria gonorrhoeae
            MS11]
          Length = 1071

 Score = 1246 bits (3225), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 621/1070 (58%), Positives = 793/1070 (74%), Gaps = 22/1070 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTDL+ ILI+GAGPIVIGQACEFDYSG QACKAL+EEGY+VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDLKSILIIGAGPIVIGQACEFDYSGAQACKALREEGYKVILVNSNPATIMTDPEMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  + VE+++ KERPDA+LPTMGGQTALN A+ LA +G L KY VELIGA  DA
Sbjct: 63   VTYIEPIMWQTVEKIIAKERPDAILPTMGGQTALNCALDLARNGVLAKYNVELIGATEDA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  FK+AM+ IG+  P S + +T++E ++   ++G FP +IRP+FT+GG+GGGI
Sbjct: 123  IDKAEDRGRFKEAMEKIGLSCPKSFVCHTMNEALAAQEQVG-FPTLIRPSFTMGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYNK+EF AIC+ G  AS T ++L+E+S+LGWKEYE+EV+RD ADN +IICSIEN DPMG
Sbjct: 182  AYNKDEFLAICERGFDASPTHELLIEQSVLGWKEYEMEVVRDKADNCIIICSIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGV+ GGSNVQFAVNP +GE++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQIMRNASLAVLREIGVDTGGSNVQFAVNPENGEMIVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VG++LD++ NDIT  +TPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGFTLDELRNDITGGRTPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            FAFEKFP ++  LTTQMKSVGE MA+GRT QESFQKALR LE G  G+   +      D 
Sbjct: 362  FAFEKFPAADDRLTTQMKSVGEVMAMGRTIQESFQKALRGLETGLCGFNPRS-----EDK 416

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
             +++  L  P P+RM  +  A + G   +EIHE+  ID WFL Q ++L+  E+ +    +
Sbjct: 417  AEIRRELANPGPERMLFVADAFRAGFTPEEIHEICAIDPWFLAQIEDLMKEEKSVSDGQL 476

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
             ++       +KR+GFSDK++A     +EKEVRE R +L + P YKRVDTCAAEF   T 
Sbjct: 477  QDLDYAALRRLKRKGFSDKRLAQLLNVSEKEVREHRYALKLHPVYKRVDTCAAEFATETA 536

Query: 627  YMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSN 686
            Y+YS+Y+ ECES P+ +KKV+ILGGGPNRIGQGIEFDYCC H + +L+ +G+ETIM+N N
Sbjct: 537  YLYSTYEEECESRPSDRKKVMILGGGPNRIGQGIEFDYCCVHAALALRESGFETIMVNCN 596

Query: 687  PETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHR 746
            PETVSTD+DTSDRLYF+PLT+EDVL ++  E P G+IV +GGQTPLKL+           
Sbjct: 597  PETVSTDFDTSDRLYFDPLTLEDVLEIVRTENPWGVIVHYGGQTPLKLA----------- 645

Query: 747  LPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEIG 806
              +A  +  V I GTS DSIDAAEDRERF  ++ +L + QP   IA +E +AL  A+EIG
Sbjct: 646  --NALVENGVNIIGTSADSIDAAEDRERFQKVLNDLGLRQPPNRIAHNEEEALVKAEEIG 703

Query: 807  YPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALAD 866
            YP+VVRPSYVLGGRAM+IV++ E L  Y+  AV+V  + PVL+D +L++AIE+DVD ++D
Sbjct: 704  YPLVVRPSYVLGGRAMQIVHSAEALQKYMREAVQVSEDSPVLLDFFLNNAIEVDVDCVSD 763

Query: 867  SCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNC 926
               +VVIGGIM+H+EQAG+HSGDS C +P  ++S    D I   T  +A  L V GLMN 
Sbjct: 764  G-KDVVIGGIMQHVEQAGIHSGDSGCSLPPYSLSEEIQDEIRRQTKAMAYALGVVGLMNV 822

Query: 927  QYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPKH 986
            Q+A+   G V++LE NPRASRTVPFVSKA G PLAK  A  M+G SL + G  KEV+P  
Sbjct: 823  QFAV-QDGVVFVLEVNPRASRTVPFVSKATGVPLAKVGARCMAGISLKEQGVEKEVVPDF 881

Query: 987  VSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVFL 1046
             +VKEAV PF KF G D +L PEMRSTGEVMG+  SF  A+ KAQ+ AG++L  +G +FL
Sbjct: 882  YAVKEAVFPFIKFPGVDTILSPEMRSTGEVMGVGASFGEAYYKAQLGAGERLNPTGKIFL 941

Query: 1047 SLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVAN 1106
            S+ +  K  + + AK F  +G+ I +T GTA +L   G+ V+ + K+ EGRPH GD + N
Sbjct: 942  SVREEDKERVIKTAKNFQALGYGICATRGTAQYLTEHGLIVQTINKVPEGRPHIGDALKN 1001

Query: 1107 GQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRS 1156
            G+I ++V T S D     D   +R+  L  +VP  TT +G  A +E  +S
Sbjct: 1002 GEIALVVNTVSSDPQSVSDSHIIRQSALQQRVPQYTTTAGGEAMSEGAKS 1051


>gi|416157109|ref|ZP_11604955.1| carbamoyl-phosphate synthase, large subunit [Moraxella catarrhalis
            101P30B1]
 gi|416224891|ref|ZP_11626747.1| carbamoyl-phosphate synthase, large subunit [Moraxella catarrhalis
            103P14B1]
 gi|416249727|ref|ZP_11636824.1| carbamoyl-phosphate synthase, large subunit [Moraxella catarrhalis
            CO72]
 gi|326562018|gb|EGE12348.1| carbamoyl-phosphate synthase, large subunit [Moraxella catarrhalis
            103P14B1]
 gi|326574513|gb|EGE24455.1| carbamoyl-phosphate synthase, large subunit [Moraxella catarrhalis
            101P30B1]
 gi|326575899|gb|EGE25822.1| carbamoyl-phosphate synthase, large subunit [Moraxella catarrhalis
            CO72]
          Length = 1078

 Score = 1246 bits (3225), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 621/1079 (57%), Positives = 792/1079 (73%), Gaps = 34/1079 (3%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILI+GAGPIVIGQACEFDYSG QACKALKEEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIKSILIIGAGPIVIGQACEFDYSGAQACKALKEEGYRVILVNSNPATIMTDPSMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+T + VEQ++ KERPDA+LPTMGGQTALN A+ L + G L KYG ELIGA  +A
Sbjct: 63   ATYIEPITWQTVEQIIAKERPDAILPTMGGQTALNCALDLDKHGVLAKYGCELIGATKEA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I+KAEDR+LF +AMK IG++ P + I  ++D+  +I  ++G FP IIRP+FT+GG+GGGI
Sbjct: 123  IEKAEDRELFDKAMKKIGLECPKAEIAQSMDDAFAIQAKVG-FPCIIRPSFTMGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEF  IC+ G   S T Q+L+++SL+GWKEYE+EV+RD  DN +I+CSIEN DPMG
Sbjct: 182  AYNREEFIEICERGFDLSPTHQLLIDESLIGWKEYEMEVVRDKKDNCIIVCSIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ +R+ SIA++REIGVE GGSNVQF +NP  G ++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQIMRNASIAVLREIGVETGGSNVQFGINPKTGRMVVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT  KTPASFEP+IDYVVTK+PR
Sbjct: 302  PRVSRSSALASKATGFPIAKIAAKLAVGYTLDELKNDITGGKTPASFEPAIDYVVTKMPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            F FEKFP +E +LTTQMKSVGE MA+GR FQES QKALR LE G +G+     ++LD++ 
Sbjct: 362  FNFEKFPQAESVLTTQMKSVGEVMAIGRNFQESMQKALRGLEIGVTGFD----EQLDFEQ 417

Query: 507  EQ------LKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQF 560
                    LK  L+ P P+R+  I  A++ G+ VD++   + ID WFL Q ++++  E  
Sbjct: 418  NDDSIISTLKLKLKTPTPERIFYIADALRFGLSVDDVFADTNIDPWFLVQIEDIVHTENQ 477

Query: 561  LLTQSVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAE 620
            L T  + ++T +    +KR+G SD +IA     +EK+ R+ R ++G+ P YKRVDTCAAE
Sbjct: 478  LKTLGMGDLTPNLLRRLKRKGLSDARIAKLMGVSEKQFRKTRWNMGIYPVYKRVDTCAAE 537

Query: 621  FEANTPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYET 680
            FE +T YMYS+YD ECE+ P+ K+K++++GGGPNRIGQGIEFDYCC H + +++  GYET
Sbjct: 538  FETSTAYMYSTYDEECEANPSNKEKIMVIGGGPNRIGQGIEFDYCCVHAALAMREDGYET 597

Query: 681  IMMNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQ 740
            IM+N NPETVSTDYDTSDRLYFEP+T+EDVL ++  E+P+G+IVQ+GGQTPLKL+  + Q
Sbjct: 598  IMVNCNPETVSTDYDTSDRLYFEPITLEDVLEIVRTEQPKGVIVQYGGQTPLKLARSLEQ 657

Query: 741  YLDEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALA 800
                           V I GTSPD+ID AEDRERF  +I +L++ QP   I KS  + + 
Sbjct: 658  -------------AGVPIIGTSPDAIDRAEDRERFLQMINKLNLRQPNNSIVKSSEEGIR 704

Query: 801  IAKEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEID 860
             A ++GYP+VVRPSYVLGGRAMEIVY ++ L  YL +AV+   E PVL+D +L DAIE+D
Sbjct: 705  EAAKVGYPLVVRPSYVLGGRAMEIVYNEDELKRYLRDAVQASHEAPVLLDHFLDDAIEVD 764

Query: 861  VDALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNV 920
            VD ++D    VVIGGIM+HIEQAGVHSGDSAC IP  ++S    D +   T+ +AK L V
Sbjct: 765  VDCVSDG-KEVVIGGIMQHIEQAGVHSGDSACSIPPYSLSDDIQDDMRRQTVAMAKELGV 823

Query: 921  CGLMNCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTK 980
             GLMN Q+AI     VY+LE NPRASRTVPFVSK IG  LAK AA  M+G++L +  FT+
Sbjct: 824  VGLMNVQFAIKGE-TVYVLEVNPRASRTVPFVSKCIGVSLAKVAARCMAGQTLAEQNFTQ 882

Query: 981  EVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQK--- 1037
            E++P H SVKEAV PF KF G D +LGPEM+STGEVMG+  +F  A+ KA + +G +   
Sbjct: 883  EIVPSHYSVKEAVFPFAKFPGVDPILGPEMKSTGEVMGVGQTFGEAYYKATLGSGDRLTG 942

Query: 1038 LPLSG---TVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMH 1094
            LP  G   TVF+S+ D  K  +  +AK     GF IV+T GT   L   G+A +RV K+ 
Sbjct: 943  LPQEGETKTVFISVRDSDKAGVVDVAKRLAGFGFNIVATGGTHDMLVGAGVACKRVNKVS 1002

Query: 1095 EGRPHAGDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEA 1153
            EGRPH  DM+ NGQI + + T+ G    + D   +RR  L  K+ V  T++   A  EA
Sbjct: 1003 EGRPHIVDMMKNGQIHLAINTTEGKQALK-DSFPIRREALQNKILVANTLNAGRAVCEA 1060


>gi|409203804|ref|ZP_11232007.1| carbamoyl phosphate synthase large subunit [Pseudoalteromonas
            flavipulchra JG1]
          Length = 1072

 Score = 1246 bits (3225), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 625/1067 (58%), Positives = 783/1067 (73%), Gaps = 18/1067 (1%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILILGAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  E+VE+++EKE+PDA+LPTMGGQTALN A+ L + G L K+GVELIGA  DA
Sbjct: 63   ATYIEPIHWEVVEKIIEKEKPDAVLPTMGGQTALNCALDLDKHGVLAKHGVELIGATADA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAE+R+ F  AMK IG++ P + I +++DE   I   IG FP IIRP+FT+GGTGGG+
Sbjct: 123  IDKAENRERFDAAMKNIGLECPRAEIAHSMDEAHDILTRIG-FPCIIRPSFTMGGTGGGV 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN EEF+ IC  GL  S T+++L+++SLLGWKEYE+EV+RD  DN +I+CSIEN DPMG
Sbjct: 182  AYNMEEFDEICTRGLDLSPTNELLIDESLLGWKEYEMEVVRDKNDNCIIVCSIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGVE GGSNVQF VNPVDG +++IEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQIMRNASMAVLREIGVETGGSNVQFGVNPVDGRMVIIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT   TPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKIAAKLAVGYTLDELQNDITGGATPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            F FEKF GS   LTTQMKSVGE MA+GR  QES QKALR LE G +G       +     
Sbjct: 362  FNFEKFAGSNDRLTTQMKSVGEVMAIGRNQQESLQKALRGLEVGATGLNPIVALDAPNAK 421

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
            E +   LR P  +R+  I  AM+ GM V+E+ EL+ +D W+L Q ++++  E  +    +
Sbjct: 422  ETIIRELREPGAERIWYIADAMRHGMSVEEVFELTKVDPWYLVQIEDILKDEATIAEVGM 481

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
            + + KD    +KR+GFSD +IA     +EKE+R+KR  L ++P YKRVDTCAAEF ++T 
Sbjct: 482  AGLNKDFLRRLKRKGFSDARIAEIAGVSEKEIRKKRHQLEILPVYKRVDTCAAEFSSDTA 541

Query: 627  YMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSN 686
            YMYS+YD ECE+ P+ K K++++GGGPNRIGQGIEFDYCC H + +++  GYETIM+N N
Sbjct: 542  YMYSTYDEECEANPSDKDKIMVIGGGPNRIGQGIEFDYCCVHAALAMREDGYETIMVNCN 601

Query: 687  PETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHR 746
            PETVSTDYDTSDRL+FEP+T+EDVL ++ +E+P+G+IVQ+GGQTPLKL+          R
Sbjct: 602  PETVSTDYDTSDRLFFEPITLEDVLEIVRVEKPKGVIVQYGGQTPLKLA----------R 651

Query: 747  LPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEIG 806
               A+G   V + GTSPD+ID AEDRERF  +++ L++ QP+     S  +A+A ++EIG
Sbjct: 652  DLEANG---VPVIGTSPDAIDRAEDRERFQQLVERLNLLQPENATVTSLEEAVAKSQEIG 708

Query: 807  YPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALAD 866
            +P+VVRPSYVLGGRAMEIVY ++ L  Y+  AV V  E PVL+D++L DAIE+DVDA+ D
Sbjct: 709  FPLVVRPSYVLGGRAMEIVYDEDDLRRYMTEAVSVSNEAPVLLDRFLDDAIEVDVDAICD 768

Query: 867  SCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNC 926
               NV+IGGIMEHIEQAGVHSGDSAC +P  T+     D +      +A  L V GLMN 
Sbjct: 769  G-ENVIIGGIMEHIEQAGVHSGDSACSLPAHTLPQDIQDVMRKQVRDMALELGVVGLMNT 827

Query: 927  QYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPKH 986
            Q+A+   G VYL+E NPRA+RTVPFVSKA G  LAK AA  M G+SL   G TKEVIP +
Sbjct: 828  QFAV-KDGRVYLIEVNPRAARTVPFVSKATGVALAKVAARCMVGQSLESQGVTKEVIPPY 886

Query: 987  VSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVFL 1046
             SVKE VLPF KF G D + GPEMRSTGEVMG+  +F  AFAKAQ+ A   LP  G   L
Sbjct: 887  YSVKEVVLPFAKFPGVDPMRGPEMRSTGEVMGVGENFAEAFAKAQLGASNTLPRGGRALL 946

Query: 1047 SLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVAN 1106
            S+ +  K  +  +AK    IGF++ +T+GTA  LE  GI V RV K+ EGRPH  D + N
Sbjct: 947  SVRNGDKARVVELAKTMKAIGFELDATNGTAKALEEAGIEVRRVNKVFEGRPHILDRIKN 1006

Query: 1107 GQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEA 1153
            G+   +V T+ G    + D   LRR  L +K    TT++ A AN  A
Sbjct: 1007 GEYSYIVNTTEGRQAIE-DSKVLRRGALQHKTNYTTTLNAAFANCTA 1052


>gi|429334702|ref|ZP_19215355.1| carbamoyl phosphate synthase large subunit [Pseudomonas putida CSV86]
 gi|428760594|gb|EKX82855.1| carbamoyl phosphate synthase large subunit [Pseudomonas putida CSV86]
          Length = 1073

 Score = 1246 bits (3225), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 627/1085 (57%), Positives = 794/1085 (73%), Gaps = 22/1085 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILILGAGPIVIGQACEFDYSG QACKAL+EEG+ VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGFRVILVNSNPATIMTDPAMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  + V +++EKERPDALLPTMGGQTALN A+ L   G LEK+GVE+IGA  D 
Sbjct: 63   ATYIEPIKWQSVAKIIEKERPDALLPTMGGQTALNCALDLEREGVLEKFGVEMIGANADT 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  F +AMK IG++ P SGI ++++E  ++  ++G FP IIRP+FT+GGTGGGI
Sbjct: 123  IDKAEDRSRFDKAMKAIGLECPRSGIAHSMEEANAVLEKLG-FPCIIRPSFTMGGTGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEFE IC  GL  S T ++L+++SL+GWKEYE+EV+RD  DN +I+CSIEN DPMG
Sbjct: 182  AYNREEFEEICARGLDLSPTKELLIDESLIGWKEYEMEVVRDKKDNCIIVCSIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGVE GGSNVQF + P  G ++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQIMRNASLAVLREIGVETGGSNVQFGICPNTGRMVVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT  +TPASFEPSIDYVVTK+PR
Sbjct: 302  PRVSRSSALASKATGFPIAKIAAKLAVGYTLDELQNDITGGRTPASFEPSIDYVVTKLPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            FAFEKFP ++  LTTQMKSVGE MA+GRTFQES QKALR LE G  G             
Sbjct: 362  FAFEKFPKADARLTTQMKSVGEVMAIGRTFQESLQKALRGLEVGVCGLDPKVDLANPETP 421

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
              LK  L VP  +R+  +  A + GM  DEI  L+ ID WFL Q ++LI  E+ + T  +
Sbjct: 422  SILKRELTVPGAERIWYVADAFRAGMTRDEIFALTSIDHWFLIQIEDLIKEEEKVKTLGL 481

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
            + + K     +KR+GFSD+++A     T+K +R  R  L V P YKRVDTCAAEF  +T 
Sbjct: 482  AAIDKQLMLNLKRKGFSDQRLAKLLGITDKNLRRHRHKLEVFPVYKRVDTCAAEFATDTA 541

Query: 627  YMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSN 686
            Y+YS+Y+ ECE+ P+ + K++ILGGGPNRIGQGIEFDYCC H + +L+  GYETIM+N N
Sbjct: 542  YLYSTYEEECEANPSTRDKIMILGGGPNRIGQGIEFDYCCVHAALALRDDGYETIMVNCN 601

Query: 687  PETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHR 746
            PETVSTDYDTSDRLYFEPLT+EDVL V+ +E+P+G+IV +GGQTPLKL+    + L+E  
Sbjct: 602  PETVSTDYDTSDRLYFEPLTLEDVLEVVRVEKPKGVIVHYGGQTPLKLA----RALEEAG 657

Query: 747  LPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEIG 806
            +P         I GTSPD+ID AEDRERF  +++ L++ QP     +SE +A+  A +IG
Sbjct: 658  VP---------IIGTSPDAIDRAEDRERFQQMVQRLNLLQPPNATVRSEDEAIRAAGDIG 708

Query: 807  YPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALAD 866
            YP+VVRPSYVLGGRAMEIVY  + L  YL  AV+V  + PVL+D +L+ AIE+DVDA+ D
Sbjct: 709  YPLVVRPSYVLGGRAMEIVYELDELKRYLREAVQVSNDSPVLLDHFLNCAIEMDVDAVCD 768

Query: 867  SCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNC 926
               +VVIG IM+HIEQAGVHSGDSAC +P  ++ +   D +     K+A  L V GLMN 
Sbjct: 769  GT-DVVIGAIMQHIEQAGVHSGDSACSLPPYSLPAHVQDEVREQVKKMALELGVVGLMNV 827

Query: 927  QYAITTSGD-VYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPK 985
            Q A+   GD +Y++E NPRASRTVPFVSK IG  LA  AA VM+GK+L +LGFTKE+IP 
Sbjct: 828  QLAL--QGDKIYVIEVNPRASRTVPFVSKCIGTSLAMIAARVMAGKTLKELGFTKEIIPN 885

Query: 986  HVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVF 1045
              SVKEAV PF KF G D +LGPEM+STGEVMG+  SF  AFAKAQ+ A + LP  GT F
Sbjct: 886  FYSVKEAVFPFAKFPGVDPILGPEMKSTGEVMGVGDSFGEAFAKAQMGASEVLPTGGTAF 945

Query: 1046 LSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVA 1105
            +S+ D  KP +  +A+  + +GF++V+T+GTA  +E  G+ V RV K+ EGRPH  DM+ 
Sbjct: 946  ISVRDDDKPQVAGVARDLIALGFEVVATAGTAKIIEAAGLKVRRVNKVTEGRPHVVDMIK 1005

Query: 1106 NGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTVTMT 1165
            N ++ +++ T+ G      D   +RR  L +K+   TT++   A  EA++     TV   
Sbjct: 1006 NDEVSLIINTTEGRQ-SIADSYSIRRNALQHKIYCTTTIAAGEAICEALKFGPEKTVRR- 1063

Query: 1166 ALQDF 1170
             LQD 
Sbjct: 1064 -LQDL 1067


>gi|416236028|ref|ZP_11630423.1| carbamoyl-phosphate synthase, large subunit [Moraxella catarrhalis
            12P80B1]
 gi|326563560|gb|EGE13819.1| carbamoyl-phosphate synthase, large subunit [Moraxella catarrhalis
            12P80B1]
          Length = 1078

 Score = 1246 bits (3225), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 621/1079 (57%), Positives = 791/1079 (73%), Gaps = 34/1079 (3%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILI+GAGPIVIGQACEFDYSG QACKALKEEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIKSILIIGAGPIVIGQACEFDYSGAQACKALKEEGYRVILVNSNPATIMTDPSMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+T + VEQ++ KERPDA+LPTMGGQTALN A+ L + G L KYG ELIGA  +A
Sbjct: 63   ATYIEPITWQTVEQIIAKERPDAILPTMGGQTALNCALDLDKHGVLAKYGCELIGATKEA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I+KAEDR+LF +AMK IG++ P + I  ++D+  +I  ++G FP IIRP+FT+GG+GGGI
Sbjct: 123  IEKAEDRELFDKAMKKIGLECPKAEIAQSMDDAFAIQAKVG-FPCIIRPSFTMGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEF  IC+ G   S T Q+L+++SL+GWKEYE+EV+RD  DN +I+CSIEN DPMG
Sbjct: 182  AYNREEFIEICERGFDLSPTHQLLIDESLIGWKEYEMEVVRDKKDNCIIVCSIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ +R+ SIA++REIGVE GGSNVQF +NP  G ++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQIMRNASIAVLREIGVETGGSNVQFGINPKTGRMVVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT  KTPASFEP+IDYVVTK+PR
Sbjct: 302  PRVSRSSALASKATGFPIAKIAAKLAVGYTLDELKNDITGGKTPASFEPAIDYVVTKMPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            F FEKFP +E +LTTQMKSVGE MA+GR FQES QKALR LE G +G+     ++LD++ 
Sbjct: 362  FNFEKFPQAESVLTTQMKSVGEVMAIGRNFQESMQKALRGLEIGVTGFD----EQLDFEQ 417

Query: 507  EQ------LKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQF 560
                    LK  L+ P P+R+  I  A++ G+ VD++   + ID WFL Q ++++  E  
Sbjct: 418  NDDSIISTLKLKLKTPTPERIFYIADALRFGLSVDDVFADTNIDPWFLVQIEDIVHTENQ 477

Query: 561  LLTQSVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAE 620
            L T  + ++T +    +KR+G SD +IA     +EK+ R+ R ++G+ P YKRVDTCAAE
Sbjct: 478  LKTLGMGDLTPNLLRRLKRKGLSDARIAKLMGVSEKQFRKTRWNMGIYPVYKRVDTCAAE 537

Query: 621  FEANTPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYET 680
            FE +T YMYS+YD ECE+ P+ K K++++GGGPNRIGQGIEFDYCC H + +++  GYET
Sbjct: 538  FETSTAYMYSTYDEECEANPSNKDKIMVIGGGPNRIGQGIEFDYCCVHAALAMREDGYET 597

Query: 681  IMMNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQ 740
            IM+N NPETVSTDYDTSDRLYFEP+T+EDVL ++  E+P+G+IVQ+GGQTPLKL+  + Q
Sbjct: 598  IMVNCNPETVSTDYDTSDRLYFEPITLEDVLEIVRTEQPKGVIVQYGGQTPLKLARSLEQ 657

Query: 741  YLDEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALA 800
                           V I GTSPD+ID AEDRERF  +I +L++ QP   I KS  + + 
Sbjct: 658  -------------AGVPIIGTSPDAIDRAEDRERFLQMINKLNLRQPSNSIVKSSEEGIR 704

Query: 801  IAKEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEID 860
             A ++GYP+VVRPSYVLGGRAMEIVY ++ L  YL +AV+   E PVL+D +L DAIE+D
Sbjct: 705  EAAKVGYPLVVRPSYVLGGRAMEIVYNEDELKRYLRDAVQASHEAPVLLDHFLDDAIEVD 764

Query: 861  VDALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNV 920
            VD ++D    VVIGGIM+HIEQAGVHSGDSAC IP  ++S    D +   T+ +AK L V
Sbjct: 765  VDCVSDG-KEVVIGGIMQHIEQAGVHSGDSACSIPPYSLSDDIQDDMRRQTVAMAKELGV 823

Query: 921  CGLMNCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTK 980
             GLMN Q+AI     VY+LE NPRASRTVPFVSK IG  LAK AA  M+G++L +  FT+
Sbjct: 824  VGLMNVQFAIKGE-TVYVLEVNPRASRTVPFVSKCIGVSLAKVAARCMAGQTLAEQNFTQ 882

Query: 981  EVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQK--- 1037
            E++P H SVKEAV PF KF G D +LGPEM+STGEVMG+  +F  A+ KA + +G +   
Sbjct: 883  EIVPSHYSVKEAVFPFAKFPGVDPILGPEMKSTGEVMGVGQTFGEAYYKATLGSGDRLTG 942

Query: 1038 LPLSG---TVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMH 1094
            LP  G   TVF+S+ D  K  +  +AK     GF IV+T GT   L   G+A +RV K+ 
Sbjct: 943  LPQEGETKTVFISVRDSDKAGVVDVAKRLAGFGFNIVATGGTHDMLVGAGVACKRVNKVS 1002

Query: 1095 EGRPHAGDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEA 1153
            EGRPH  DM+ NGQI + + T+ G    + D   +RR  L  K+ V  T++   A  EA
Sbjct: 1003 EGRPHIVDMMKNGQIHLAINTTEGKQALK-DSFPIRREALQNKILVANTLNAGRAVCEA 1060


>gi|402819523|ref|ZP_10869091.1| hypothetical protein IMCC14465_03250 [alpha proteobacterium
            IMCC14465]
 gi|402511670|gb|EJW21931.1| hypothetical protein IMCC14465_03250 [alpha proteobacterium
            IMCC14465]
          Length = 1081

 Score = 1246 bits (3224), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 623/1099 (56%), Positives = 816/1099 (74%), Gaps = 41/1099 (3%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KR+D++ IL++GAGPIVIGQACEFDYSGTQACKALKEEGY VILINSNPATIMTDP LAD
Sbjct: 3    KRSDIKSILMIGAGPIVIGQACEFDYSGTQACKALKEEGYRVILINSNPATIMTDPELAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+TP++V +++E E+PDALLPTMGGQTALN A+ALAE G LEK+ V+LIGA L+A
Sbjct: 63   ATYIEPITPDMVTRIIEIEKPDALLPTMGGQTALNTAIALAERGVLEKHNVQLIGADLEA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR LF+QAM+ IG+++P S +  T+DE ++  + +G  P IIRP+FT+GGTGGG+
Sbjct: 123  INKAEDRLLFRQAMEKIGLESPRSKVVKTVDEALTNLDFVG-LPTIIRPSFTMGGTGGGV 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEF  I + GL AS  ++VL+E+S++GWKEYE+EV+RD ADN +I+CSIENVDPMG
Sbjct: 182  AYNREEFVQIVEQGLEASPVTEVLIEESIIGWKEYEMEVVRDKADNCIIVCSIENVDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPA TLTD+EYQ +R+ SIA++REIGVE GGSNVQFAVNP DG +++IEMN
Sbjct: 242  VHTGDSITVAPALTLTDREYQIMRNASIAVLREIGVETGGSNVQFAVNPEDGRLVIIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRF 447
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT  TPASFEP+IDYVVTKIPRF
Sbjct: 302  PRVSRSSALASKATGFPIAKIAAKLAVGYTLDELSNDITGVTPASFEPTIDYVVTKIPRF 361

Query: 448  AFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDWE 507
            AFEKFPGS+P+LTT MKSVGE+MA+GR F+ES QKALRSLE G +G    N + +D   +
Sbjct: 362  AFEKFPGSKPVLTTAMKSVGESMAIGRCFEESLQKALRSLETGLTGL---NEQLIDATTD 418

Query: 508  QLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVE----QFLLT 563
            QL  +L+ P PDR+  I  A++ GM  +EI  LS  + WF+ + K ++D+E    +F L 
Sbjct: 419  QLHAALKTPTPDRLLHIADALRAGMSEEEICTLSGFNPWFVARLKNIVDMEAKIKEFGLP 478

Query: 564  QSVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEA 623
                N+  D+F  +K+ G SD+++A  T  +E  VR+ R  L + P ++R+DTCAAEF A
Sbjct: 479  DDPDNI--DNFRAIKKLGLSDRRLAELTGRSEMNVRQARHKLNLRPHFRRIDTCAAEFAA 536

Query: 624  NTPYMYSSYD----FE--CESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAG 677
             TPY+YSSY+    FE   E+ P+ + K +ILGGGPNRIGQGIEFDYCCCH ++++    
Sbjct: 537  QTPYLYSSYETISPFENQNEANPSTRTKAVILGGGPNRIGQGIEFDYCCCHAAYAMGDID 596

Query: 678  YETIMMNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPE----GIIVQFGGQTPLK 733
             E+IM+N NPETVSTDYDTSDRLYFEPLT EDVL ++  E+ +    G+IVQFGGQTPLK
Sbjct: 597  IESIMVNCNPETVSTDYDTSDRLYFEPLTEEDVLEILHCEQSKGEIAGVIVQFGGQTPLK 656

Query: 734  LSLPIHQYLDEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAK 793
            LS    Q L+E+ +P         I GTSPD+ID AEDR+RF  ++  LS++QP  GIA+
Sbjct: 657  LS----QALEENNIP---------ILGTSPDAIDLAEDRDRFKDLLDRLSLKQPPNGIAR 703

Query: 794  SEADALAIAKEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYL 853
            S   A  I ++IG+PVV+RPSYVLGGRAMEIV+T+E L  Y+  AV V  + PVLID YL
Sbjct: 704  SATQAHEIVQQIGFPVVIRPSYVLGGRAMEIVHTEEQLERYMREAVIVSGDSPVLIDGYL 763

Query: 854  SDAIEIDVDALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIK 913
             DA E+DVD L D   +V + GI+EHIE+AGVHSGDSAC +P  ++    ++ +     +
Sbjct: 764  RDASEVDVDVLCDG-EDVYVAGILEHIEEAGVHSGDSACSMPPHSLQPEIIEELGRQASE 822

Query: 914  LAKRLNVCGLMNCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSL 973
            +A  LNV GLMN Q+A+     +Y++E NPRASRTVPFV+K +G P+A+ AA +M+GK L
Sbjct: 823  MALALNVVGLMNVQFAVKDE-TIYVIEVNPRASRTVPFVAKVLGQPIARIAAKIMAGKKL 881

Query: 974  NDLGFTKEVIPK--HVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQ 1031
             D    +   PK  H++VKEAV PF +F G D +LGPEMRSTGEVMG+D +F  AFAK+Q
Sbjct: 882  ADFNLAQ---PKFEHIAVKEAVFPFGRFPGVDTILGPEMRSTGEVMGLDTNFATAFAKSQ 938

Query: 1032 IAAGQKLPLSGTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVL 1091
            I +G  LP+ GT F+S+ +  K  +  +A   L +GFK+++TSGT   LE  G+AV +V 
Sbjct: 939  IGSGTVLPVEGTAFISVRNDDKSKIAPLAAELLALGFKVLATSGTCKLLEENGLAVSQVN 998

Query: 1092 KMHEGRPHAGDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANA 1151
            K+ EGRPH  D + +  +++++ T+ G+     D   +RR  L  K+P  TT++ A A  
Sbjct: 999  KVLEGRPHIVDAMKDATVELVINTTQGEQ-SLADSKSIRRTALEMKIPYFTTIAAAEAAI 1057

Query: 1152 EAIRSLKSNTVTMTALQDF 1170
              I++++S T+ + +LQD+
Sbjct: 1058 SGIKAIQSGTLNVRSLQDY 1076


>gi|416217998|ref|ZP_11624666.1| carbamoyl-phosphate synthase, large subunit [Moraxella catarrhalis
            7169]
 gi|416231405|ref|ZP_11628747.1| carbamoyl-phosphate synthase, large subunit [Moraxella catarrhalis
            46P47B1]
 gi|416240059|ref|ZP_11632174.1| carbamoyl-phosphate synthase, large subunit [Moraxella catarrhalis
            BC1]
 gi|416246930|ref|ZP_11635299.1| carbamoyl-phosphate synthase, large subunit [Moraxella catarrhalis
            BC8]
 gi|421780147|ref|ZP_16216637.1| carbamoyl-phosphate synthase large subunit [Moraxella catarrhalis
            RH4]
 gi|326559682|gb|EGE10093.1| carbamoyl-phosphate synthase, large subunit [Moraxella catarrhalis
            46P47B1]
 gi|326560323|gb|EGE10711.1| carbamoyl-phosphate synthase, large subunit [Moraxella catarrhalis
            7169]
 gi|326566358|gb|EGE16508.1| carbamoyl-phosphate synthase, large subunit [Moraxella catarrhalis
            BC1]
 gi|326570168|gb|EGE20213.1| carbamoyl-phosphate synthase, large subunit [Moraxella catarrhalis
            BC8]
 gi|407812941|gb|EKF83725.1| carbamoyl-phosphate synthase large subunit [Moraxella catarrhalis
            RH4]
          Length = 1078

 Score = 1246 bits (3224), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 621/1079 (57%), Positives = 791/1079 (73%), Gaps = 34/1079 (3%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILI+GAGPIVIGQACEFDYSG QACKALKEEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIKSILIIGAGPIVIGQACEFDYSGAQACKALKEEGYRVILVNSNPATIMTDPSMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+T + VEQ++ KERPDA+LPTMGGQTALN A+ L + G L KYG ELIGA  +A
Sbjct: 63   ATYIEPITWQTVEQIIAKERPDAILPTMGGQTALNCALDLDKHGVLAKYGCELIGATKEA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I+KAEDR+LF +AMK IG++ P + I  ++D+  +I  ++G FP IIRP+FT+GG+GGGI
Sbjct: 123  IEKAEDRELFDKAMKKIGLECPKAEIAQSMDDAFAIQAKVG-FPCIIRPSFTMGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEF  IC+ G   S T Q+L+++SL+GWKEYE+EV+RD  DN +I+CSIEN DPMG
Sbjct: 182  AYNREEFIEICERGFDLSPTHQLLIDESLIGWKEYEMEVVRDKKDNCIIVCSIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ +R+ SIA++REIGVE GGSNVQF +NP  G ++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQIMRNASIAVLREIGVETGGSNVQFGINPKTGRMVVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT  KTPASFEP+IDYVVTK+PR
Sbjct: 302  PRVSRSSALASKATGFPIAKIAAKLAVGYTLDELKNDITGGKTPASFEPAIDYVVTKMPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            F FEKFP +E +LTTQMKSVGE MA+GR FQES QKALR LE G +G+     ++LD++ 
Sbjct: 362  FNFEKFPQAESVLTTQMKSVGEVMAIGRNFQESMQKALRGLEIGVTGFD----EQLDFEQ 417

Query: 507  EQ------LKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQF 560
                    LK  L+ P P+R+  I  A++ G+ VD++   + ID WFL Q ++++  E  
Sbjct: 418  NDDSIISTLKLKLKTPTPERIFYIADALRFGLSVDDVFADTNIDPWFLVQIEDIVHTENQ 477

Query: 561  LLTQSVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAE 620
            L T  + ++T +    +KR+G SD +IA     +EK+ R+ R ++G+ P YKRVDTCAAE
Sbjct: 478  LKTLGMGDLTPNLLRRLKRKGLSDARIAKLMGVSEKQFRKTRWNMGIYPVYKRVDTCAAE 537

Query: 621  FEANTPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYET 680
            FE +T YMYS+YD ECE+ P+ K K++++GGGPNRIGQGIEFDYCC H + +++  GYET
Sbjct: 538  FETSTAYMYSTYDEECEANPSNKDKIMVIGGGPNRIGQGIEFDYCCVHAALAMREDGYET 597

Query: 681  IMMNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQ 740
            IM+N NPETVSTDYDTSDRLYFEP+T+EDVL ++  E+P+G+IVQ+GGQTPLKL+  + Q
Sbjct: 598  IMVNCNPETVSTDYDTSDRLYFEPITLEDVLEIVRTEQPKGVIVQYGGQTPLKLARSLEQ 657

Query: 741  YLDEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALA 800
                           V I GTSPD+ID AEDRERF  +I +L++ QP   I KS  + + 
Sbjct: 658  -------------AGVPIIGTSPDAIDRAEDRERFLQMINKLNLRQPNNSIVKSSEEGIR 704

Query: 801  IAKEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEID 860
             A ++GYP+VVRPSYVLGGRAMEIVY ++ L  YL +AV+   E PVL+D +L DAIE+D
Sbjct: 705  EAAKVGYPLVVRPSYVLGGRAMEIVYNEDELKRYLRDAVQASHEAPVLLDHFLDDAIEVD 764

Query: 861  VDALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNV 920
            VD ++D    VVIGGIM+HIEQAGVHSGDSAC IP  ++S    D +   T+ +AK L V
Sbjct: 765  VDCVSDG-KEVVIGGIMQHIEQAGVHSGDSACSIPPYSLSDDIQDDMRRQTVAMAKELGV 823

Query: 921  CGLMNCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTK 980
             GLMN Q+AI     VY+LE NPRASRTVPFVSK IG  LAK AA  M+G++L +  FT+
Sbjct: 824  VGLMNVQFAIKGE-TVYVLEVNPRASRTVPFVSKCIGVSLAKVAARCMAGQTLAEQNFTQ 882

Query: 981  EVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQK--- 1037
            E++P H SVKEAV PF KF G D +LGPEM+STGEVMG+  +F  A+ KA + +G +   
Sbjct: 883  EIVPSHYSVKEAVFPFAKFPGVDPILGPEMKSTGEVMGVGQTFGEAYYKATLGSGDRLTG 942

Query: 1038 LPLSG---TVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMH 1094
            LP  G   TVF+S+ D  K  +  +AK     GF IV+T GT   L   G+A +RV K+ 
Sbjct: 943  LPQEGETKTVFISVRDSDKAGVVDVAKRLAGFGFNIVATGGTHDMLVGAGVACKRVNKVS 1002

Query: 1095 EGRPHAGDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEA 1153
            EGRPH  DM+ NGQI + + T+ G    + D   +RR  L  K+ V  T++   A  EA
Sbjct: 1003 EGRPHIVDMMKNGQIHLAINTTEGKQALK-DSFPIRREALQNKILVANTLNAGRAVCEA 1060


>gi|374855067|dbj|BAL57933.1| carbamoyl-phosphate synthase large subunit [uncultured candidate
            division OP1 bacterium]
 gi|374855692|dbj|BAL58547.1| carbamoyl phosphate synthase large subunit [uncultured candidate
            division OP1 bacterium]
          Length = 1074

 Score = 1246 bits (3224), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 626/1084 (57%), Positives = 802/1084 (73%), Gaps = 25/1084 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTDL++IL++G+GPIVIGQA EFDYSG+QACKAL+EEGYEV+L+N+NPATIMTDP  A 
Sbjct: 3    KRTDLKRILVIGSGPIVIGQAGEFDYSGSQACKALREEGYEVLLVNNNPATIMTDPESAA 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
            R YI P+ PE+VE+++ +ERPDALLPT+GGQTALNLAV LA +G LE+YGVELIGA   A
Sbjct: 63   RVYIEPLVPEIVEKIIARERPDALLPTVGGQTALNLAVELARAGVLERYGVELIGASRRA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I+ AEDR LFK+ M+  G+  P  G+  +L++  +++  +  FP++ RP+FTLGG G G+
Sbjct: 123  IEIAEDRLLFKETMERAGLPVPQGGVVRSLEDAQNVSRTL-RFPILARPSFTLGGEGSGV 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            A+++EE   + + GL  S   +VL+E+S++GWKE+ELEVMRD  DNVVIICSIEN DPMG
Sbjct: 182  AHSQEELSRVVQRGLELSPVREVLLEESVIGWKEFELEVMRDRNDNVVIICSIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ++RD++I +IR +GVE GGSN+QFAVNP DG ++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQQMRDWAIRVIRAVGVETGGSNIQFAVNPRDGRMLVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRF 447
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++PNDIT+KTPASFEP++DYVV KIPR+
Sbjct: 302  PRVSRSSALASKATGFPIAKIAAKLAVGYTLDELPNDITQKTPASFEPTLDYVVVKIPRW 361

Query: 448  AFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDWE 507
             FEKFPG++  LTTQM SVGE MALGRTF+E+ QKA+RSLE G  G G ++  E     E
Sbjct: 362  NFEKFPGADTTLTTQMCSVGEVMALGRTFKEALQKAIRSLEIGQLGLGGTS--EPVLSPE 419

Query: 508  QLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSVS 567
             L+  L  PNP R+  IY A+  G  V E+   + ID WF +Q  E+  +EQ +    ++
Sbjct: 420  LLRGFLERPNPQRIFFIYQALLAGASVAELAHWTGIDPWFFSQIAEIARLEQRIRAYDLA 479

Query: 568  NMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTPY 627
            ++  D  ++ KR GFSD  +A   ++ E  VR KRL  G+ P YK+VDTCAAEFEA+TPY
Sbjct: 480  SLPTDLLWQAKRFGFSDAALAKILRTGESAVRAKRLEHGIRPVYKKVDTCAAEFEAHTPY 539

Query: 628  MYSSYDF-ECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSN 686
            +YS+Y+  ECE+APTQ+KKVL+LGGGP RIGQGIEFDYCCCH +F+L+  G+ETIM+N N
Sbjct: 540  LYSTYEADECEAAPTQRKKVLVLGGGPYRIGQGIEFDYCCCHAAFALRELGFETIMINCN 599

Query: 687  PETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHR 746
            PETVSTDYDTSD+LYFEPLT+EDVL++I++ERP+G+IVQFGGQTPL L+L     L  H 
Sbjct: 600  PETVSTDYDTSDKLYFEPLTLEDVLHIIEIERPDGVIVQFGGQTPLNLAL----KLKAHG 655

Query: 747  LPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEIG 806
            +P         IWGTSP++ID AEDRE+F  I+ EL + +P+GGIA S  +AL IA+ IG
Sbjct: 656  VP---------IWGTSPENIDLAEDREKFTLILDELGVRRPRGGIAFSADEALRIAQSIG 706

Query: 807  YPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALAD 866
            +PV+VRPSYVLGGRAM I Y    L  Y+E A  V PE P+LID++L DAIEIDVDA+AD
Sbjct: 707  FPVLVRPSYVLGGRAMAICYDRSDLEHYIEEAARVSPEHPILIDEFLQDAIEIDVDAVAD 766

Query: 867  --SCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLM 924
              +C   VIGGI+EHIE+AG+HSGDS C++P  T+S   LD +   T  LA+RL V GLM
Sbjct: 767  GRAC---VIGGILEHIERAGIHSGDSCCVLPPFTLSQKILDEVRQVTQSLARRLTVVGLM 823

Query: 925  NCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIP 984
            N QYA+     +Y+LE NPRASRTVPFVSKA G PLAK AA  M+G +L  +GFT E   
Sbjct: 824  NIQYAVKEE-TLYVLEVNPRASRTVPFVSKATGVPLAKLAAKAMAGLTLKGMGFTHEPTV 882

Query: 985  KHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTV 1044
            K   VK  V PF++F   D +LGPEM+STGEVMG   +   AFAK Q+    +LP  G V
Sbjct: 883  KGFHVKAPVFPFDRFL-VDPVLGPEMKSTGEVMGSGQTVGEAFAKTQLTLKSRLPTDGRV 941

Query: 1045 FLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMV 1104
            FLS+ND  KP +  +A+A +++GF +V+T GTA FL   GI    + K+ EG PH  D +
Sbjct: 942  FLSVNDHDKPAIVPVARALVELGFTLVATRGTAEFLRRFGIPAHTINKVSEGHPHIADAI 1001

Query: 1105 ANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTVTM 1164
              GQIQ+++ T  G      D   +R   + ++VP +TTV GA A  EAIR++K+    +
Sbjct: 1002 RQGQIQLVLNTPLGKRAHH-DEAAIRIEAVKHRVPYVTTVEGAQALLEAIRAMKTGMPKV 1060

Query: 1165 TALQ 1168
              L+
Sbjct: 1061 YPLE 1064


>gi|170719895|ref|YP_001747583.1| carbamoyl phosphate synthase large subunit [Pseudomonas putida W619]
 gi|169757898|gb|ACA71214.1| carbamoyl-phosphate synthase, large subunit [Pseudomonas putida W619]
          Length = 1073

 Score = 1246 bits (3224), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 628/1089 (57%), Positives = 799/1089 (73%), Gaps = 30/1089 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILILGAGPIVIGQACEFDYSG QACKAL+EEG+ VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGFRVILVNSNPATIMTDPAMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  + V +++EKERPDA+LPTMGGQTALN A+ L   G LEK+GVE+IGA  D 
Sbjct: 63   ATYIEPIKWQSVAKIIEKERPDAVLPTMGGQTALNCALDLERHGVLEKFGVEMIGANADT 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  F +AMK IG++ P SGI ++++E  ++  ++G FP IIRP+FT+GGTGGGI
Sbjct: 123  IDKAEDRSRFDKAMKDIGLECPRSGIAHSMEEANAVLEKLG-FPCIIRPSFTMGGTGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEFE IC  GL  S T ++L+++SL+GWKEYE+EV+RD  DN +I+CSIEN DPMG
Sbjct: 182  AYNREEFEEICTRGLDLSPTKELLIDESLIGWKEYEMEVVRDKKDNCIIVCSIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGVE GGSNVQF + P  G ++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQIMRNASLAVLREIGVETGGSNVQFGICPNTGRMVVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL++GY+LD++ NDIT  +TPASFEPSIDYVVTK+PR
Sbjct: 302  PRVSRSSALASKATGFPIAKIAAKLAIGYTLDELQNDITGGRTPASFEPSIDYVVTKLPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            FAFEKFP ++  LTTQMKSVGE MA+GRTFQES QKALR LE G     C    ++D   
Sbjct: 362  FAFEKFPKADARLTTQMKSVGEVMAIGRTFQESLQKALRGLEVG----ACGLDPKVDLAS 417

Query: 507  EQ----LKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLL 562
             +    LK  L VP  +R+  +  AM+ GM  +EI  L+ ID WFL Q ++LI  E+ + 
Sbjct: 418  PEAAGILKRELTVPGAERIWYVADAMRSGMTCEEIFALTGIDMWFLVQMEDLIKEEEKVK 477

Query: 563  TQSVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFE 622
            T ++S + KD    +KR+GFSD+++A     T+K +R  R  L V P YKRVDTCAAEF 
Sbjct: 478  TLALSAIDKDYMLRLKRKGFSDQRLAKLLGITDKNLRRHRHKLEVFPVYKRVDTCAAEFA 537

Query: 623  ANTPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIM 682
             +T Y+YS+Y+ ECE+ P+ + K++ILGGGPNRIGQGIEFDYCC H + +L+  GYETIM
Sbjct: 538  TDTAYLYSTYEEECEANPSTRDKIMILGGGPNRIGQGIEFDYCCVHAALALREDGYETIM 597

Query: 683  MNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYL 742
            +N NPETVSTDYDTSDRLYFEPLT+EDVL V  +E+P+G+IV +GGQTPLKL+    + L
Sbjct: 598  VNCNPETVSTDYDTSDRLYFEPLTLEDVLEVCRVEKPKGVIVHYGGQTPLKLA----RAL 653

Query: 743  DEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIA 802
            +E  +P         I GTSPD+ID AEDRERF  +++ L++ QP     +SE +A+  A
Sbjct: 654  EEAGVP---------IIGTSPDAIDRAEDRERFQQMVQRLNLLQPPNATVRSEEEAIRAA 704

Query: 803  KEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVD 862
              IGYP+VVRPSYVLGGRAMEIVY  + L  YL  AV+V  + PVL+D +L+ AIE+DVD
Sbjct: 705  GGIGYPLVVRPSYVLGGRAMEIVYELDELKRYLREAVQVSNDSPVLLDHFLNCAIEMDVD 764

Query: 863  ALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCG 922
            A+ D   +VVIG IM+HIEQAGVHSGDSAC +P  ++S    D +     K+A  L V G
Sbjct: 765  AVCDGT-DVVIGAIMQHIEQAGVHSGDSACSLPPYSLSKDVQDQVRDQVRKMALELGVVG 823

Query: 923  LMNCQYAITTSGD-VYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKE 981
            LMN Q A+   GD +Y++E NPRASRTVPFVSK IG  LA  AA VM+GK+L +LGFT+E
Sbjct: 824  LMNVQLAL--QGDKIYVIEVNPRASRTVPFVSKCIGTSLAMIAARVMAGKTLKELGFTQE 881

Query: 982  VIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLS 1041
            +IP   SVKEAV PF KF G D +LGPEM+STGEVMG+  SF  AFAKAQ+ A + LP  
Sbjct: 882  IIPNFYSVKEAVFPFAKFPGVDPILGPEMKSTGEVMGVGDSFGEAFAKAQMGASEVLPTG 941

Query: 1042 GTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAG 1101
            GT F+S+ D  KP +  +A+  + +GF++V+T+GTA  +E  G+ V RV K+ EGRPH  
Sbjct: 942  GTAFISVRDDDKPQVAGVARDLIALGFEVVATAGTAKVIEAAGLKVRRVNKVTEGRPHVV 1001

Query: 1102 DMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNT 1161
            DM+ N ++ +++ T+ G      D   +RR  L +K+   TT++   A  EA++     T
Sbjct: 1002 DMIKNDEVSLIINTTEGRQ-SIADSYSIRRNALQHKIYCTTTIAAGEAICEALKFGPEKT 1060

Query: 1162 VTMTALQDF 1170
            V    LQD 
Sbjct: 1061 VRR--LQDL 1067


>gi|414069497|ref|ZP_11405490.1| carbamoyl-phosphate synthase large subunit [Pseudoalteromonas sp.
            Bsw20308]
 gi|410808005|gb|EKS13978.1| carbamoyl-phosphate synthase large subunit [Pseudoalteromonas sp.
            Bsw20308]
          Length = 1072

 Score = 1246 bits (3223), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 622/1077 (57%), Positives = 789/1077 (73%), Gaps = 18/1077 (1%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILILGAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPDMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  E+VE+++EKE+PDA+LPTMGGQTALN A+ L + G L K+GVELIGA  DA
Sbjct: 63   ATYIEPIHWEVVEKIIEKEKPDAVLPTMGGQTALNCALDLDKHGVLAKHGVELIGATADA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAE+R+ F  AMK IG++ P + I +T++E       IG  P IIRP+FT+GGTGGG+
Sbjct: 123  IDKAENRERFDVAMKNIGLECPRAEIAHTMEEAKDTMTRIG-LPCIIRPSFTMGGTGGGV 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN EEFE IC+ GL  S T+++L+++SL+GWKEYE EV+RD  DN +I+C+IEN DPMG
Sbjct: 182  AYNMEEFEEICERGLDLSPTNELLIDESLIGWKEYETEVVRDKNDNCIIVCTIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGVE GGSNVQF +NP DG +++IEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQIMRNASMAVLREIGVETGGSNVQFGINPEDGRMVIIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITK-KTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT  KTPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKIAAKLAVGYTLDELQNDITGGKTPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            F FEKF G+   LTTQMKSVGE MA+GR  QES  KALR LE G +G+      +     
Sbjct: 362  FNFEKFAGANDRLTTQMKSVGEVMAIGRNQQESLHKALRGLEVGATGFNPIVALDDPKAK 421

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
            E++   LR P  +R+  I  AM+ GM VD+++EL+ +++WFL Q ++++  E  +    +
Sbjct: 422  EKIIRELREPGAERIWYIADAMRHGMSVDDVYELTKVNRWFLVQIEDILKDEAKIGEVGM 481

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
            + +  D   ++KR+GF+D +IA     +E E+R+KR  L ++P YKRVDTCAAEF ++T 
Sbjct: 482  AGLNADFLRKLKRKGFADPRIAEIAGVSEAEIRKKRHLLNIVPVYKRVDTCAAEFSSDTA 541

Query: 627  YMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSN 686
            YMYSSYD ECE+ PT K K++++GGGPNRIGQGIEFDYCC H S +L+  GYETIM+N N
Sbjct: 542  YMYSSYDEECEANPTDKDKIMVIGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVNCN 601

Query: 687  PETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHR 746
            PETVSTDYDTSDRLYFEP+T+EDVL ++ +E+P+G+IVQ+GGQTPLKL+          R
Sbjct: 602  PETVSTDYDTSDRLYFEPITLEDVLEIVRVEKPKGVIVQYGGQTPLKLA----------R 651

Query: 747  LPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEIG 806
               A+G   V + GTSPD+ID AEDRERF  +++ L++ QP+     S  +AL  + EIG
Sbjct: 652  ELEANG---VPVIGTSPDAIDRAEDRERFQQLVERLNLLQPENATVTSTEEALLKSVEIG 708

Query: 807  YPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALAD 866
            +P+VVRPSYVLGGRAMEIVY ++ L  Y+  AV+   E PVL+D++L +AIE+DVDA+ D
Sbjct: 709  FPLVVRPSYVLGGRAMEIVYDEDDLRRYMTEAVQASNEAPVLLDRFLDNAIEVDVDAICD 768

Query: 867  SCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNC 926
                V+IGGIMEHIEQAGVHSGDSAC +P  ++S    D +      +A  L V GLMN 
Sbjct: 769  G-EQVIIGGIMEHIEQAGVHSGDSACSLPAHSLSQEVQDVMRKQVTDMALELGVVGLMNT 827

Query: 927  QYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPKH 986
            Q+A+   G VYL+E NPRA+RTVPFVSKA G  LAK AA  M+G+SL   G TKEVIP +
Sbjct: 828  QFAV-KDGKVYLIEVNPRAARTVPFVSKATGVALAKVAARCMAGQSLASQGITKEVIPPY 886

Query: 987  VSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVFL 1046
             SVKE VLPF KFQG D + GPEMRSTGEVMG+  +F  AFAKAQ+ A   LP  G   L
Sbjct: 887  YSVKEVVLPFAKFQGVDPIRGPEMRSTGEVMGVGDTFAEAFAKAQLGASNTLPRGGRALL 946

Query: 1047 SLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVAN 1106
            S+ +  KP +  +AK   D+GF++ +T GTAH LE  GI V RV K++EGRPH  D + N
Sbjct: 947  SVRNSDKPRIVELAKIMTDLGFELDATGGTAHALEEAGIEVRRVNKVYEGRPHILDYIKN 1006

Query: 1107 GQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTVT 1163
             +   +V T+ G    + D   LRR  L  K    TT++ A AN  A ++   + VT
Sbjct: 1007 KEYSYIVNTTEGRQAIE-DSKVLRRGALQNKTNYTTTLNAAFANCTANKADDRSKVT 1062



 Score =  237 bits (604), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 154/422 (36%), Positives = 238/422 (56%), Gaps = 24/422 (5%)

Query: 67  KIDS-SAELSNGAA---SSKDQKL-GKRTDLRKILILGAGPIVIGQACEFDYSGTQACKA 121
           ++D+ +AE S+  A   SS D++     TD  KI+++G GP  IGQ  EFDY    A  A
Sbjct: 528 RVDTCAAEFSSDTAYMYSSYDEECEANPTDKDKIMVIGGGPNRIGQGIEFDYCCVHASLA 587

Query: 122 LKEEGYEVILINSNPATIMTDPGLADRTYITPMTPELVEQVLEKERPDALLPTMGGQTAL 181
           L+E+GYE I++N NP T+ TD   +DR Y  P+T E V +++  E+P  ++   GGQT L
Sbjct: 588 LREDGYETIMVNCNPETVSTDYDTSDRLYFEPITLEDVLEIVRVEKPKGVIVQYGGQTPL 647

Query: 182 NLAVALAESGALEKYGVELIGAKLDAIKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECI 241
            LA        LE  GV +IG   DAI +AEDR+ F+Q ++ + +  P +    + +E +
Sbjct: 648 KLA------RELEANGVPVIGTSPDAIDRAEDRERFQQLVERLNLLQPENATVTSTEEAL 701

Query: 242 SIANEIGEFPLIIRPAFTLGGTGGGIAYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKE 301
             + EIG FPL++RP++ LGG    I Y++++        + AS  + VL+++ L    E
Sbjct: 702 LKSVEIG-FPLVVRPSYVLGGRAMEIVYDEDDLRRYMTEAVQASNEAPVLLDRFLDNAIE 760

Query: 302 YELEVMRDLADNVVIICSIENVDPMGVHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREI 361
            +++ + D  + V+I   +E+++  GVH+GDS    PA +L+ +    +R     +  E+
Sbjct: 761 VDVDAICD-GEQVIIGGIMEHIEQAGVHSGDSACSLPAHSLSQEVQDVMRKQVTDMALEL 819

Query: 362 GVECGGSNVQFAVNPVDGEVMVIEMNPRVSRSSALASKATGFPIAKMAAKLSVGYSLDQI 421
           GV  G  N QFAV   DG+V +IE+NPR +R+    SKATG  +AK+AA+   G SL   
Sbjct: 820 GV-VGLMNTQFAVK--DGKVYLIEVNPRAARTVPFVSKATGVALAKVAARCMAGQSL--A 874

Query: 422 PNDITKKTPASFEPSIDYVVTKIPRFAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQ 481
              ITK+    +     Y V ++    F KF G +P+   +M+S GE M +G TF E+F 
Sbjct: 875 SQGITKEVIPPY-----YSVKEVV-LPFAKFQGVDPIRGPEMRSTGEVMGVGDTFAEAFA 928

Query: 482 KA 483
           KA
Sbjct: 929 KA 930


>gi|410942629|ref|ZP_11374404.1| carbamoyl-phosphate synthase, large subunit [Leptospira noguchii str.
            2006001870]
 gi|410782267|gb|EKR71283.1| carbamoyl-phosphate synthase, large subunit [Leptospira noguchii str.
            2006001870]
          Length = 1106

 Score = 1245 bits (3222), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 635/1119 (56%), Positives = 806/1119 (72%), Gaps = 58/1119 (5%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            +R D+R +LILG+GPIVIGQACEFDYSGTQA KALKE+G  VIL+NSNPATIMTDP LAD
Sbjct: 3    RREDIRSVLILGSGPIVIGQACEFDYSGTQAAKALKEKGIRVILLNSNPATIMTDPDLAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TY+ PMT  +V+++LEKE+PDA+LPT+GGQTALNLA+A   +G LEKY VELIGAK+DA
Sbjct: 63   ATYVEPMTVPVVQKILEKEKPDAILPTVGGQTALNLALACNSAGILEKYNVELIGAKVDA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            IKKAEDR+LFK+AM+ IG++ P SG+ N L + + I  ++G  PLI+RPAFTLGGTGGGI
Sbjct: 123  IKKAEDRELFKKAMEKIGIRVPASGLANNLKDAVEIKTKLG-LPLIVRPAFTLGGTGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AY +E FE +   GL AS  SQVL+E+S+LGWKE+ELEVMRDLADNVVIICSIEN+DPMG
Sbjct: 182  AYTEETFEEVVSKGLKASPISQVLLEESVLGWKEFELEVMRDLADNVVIICSIENIDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAP QTL+DKEYQ LRD SI+IIREIGVE GGSN+QFAVNPV+G+V+VIEMN
Sbjct: 242  VHTGDSITVAPQQTLSDKEYQNLRDMSISIIREIGVETGGSNIQFAVNPVNGDVIVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRF 447
            PRVSRSSALASKATGFPIAK+AA LS+GY+LD+I NDIT+ TPASFEPSIDYVVTK+PRF
Sbjct: 302  PRVSRSSALASKATGFPIAKIAALLSIGYTLDEIKNDITRVTPASFEPSIDYVVTKVPRF 361

Query: 448  AFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSN-VKEL---- 502
            AFEKFPG++  L  QMK+VGEAMA+GRTF+ESFQKALRSLE    G+G     +EL    
Sbjct: 362  AFEKFPGTDDTLGVQMKAVGEAMAIGRTFKESFQKALRSLEIDRYGFGSDGYFQELLYSR 421

Query: 503  ----DWDWEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVE 558
                D   E +   L+ PN  R+  +  A  +G  VD+IH+L  ID+WFL Q + L+ +E
Sbjct: 422  SLNNDQRKEWIDSHLKRPNDKRIFYVKLAFDEGYTVDQIHDLCKIDRWFLWQMEGLLKLE 481

Query: 559  QFLLTQSVSNMTKDDFYEVKRRGFSDKQIAFAT--------------------------K 592
            +    +    +TK     +KR GFS++Q++F                            K
Sbjct: 482  REYSEKGNLLLTK-----MKRAGFSNRQLSFLKNKKQILDLLDGNLRVDLKKTEIQNLLK 536

Query: 593  STEKEVREKRLSLGVIPSYKRVDTCAAEFEANTPYMYSSYDFECESAPTQKKKVLILGGG 652
             TE E+  +  S  ++P YKR+DTCA EFEA TPY YSSYD E ES  T  + V+ILGGG
Sbjct: 537  KTEDEIEAELGSKKILPVYKRIDTCAGEFEAYTPYFYSSYDDEDESDVTNARSVMILGGG 596

Query: 653  PNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSNPETVSTDYDTSDRLYFEPLTVEDVLN 712
            PNRIGQGIEFDYCCC  S++LQ  G E+IM+NSNPETVSTDYDTSDRLYFEPLT+EDV  
Sbjct: 597  PNRIGQGIEFDYCCCQASYALQDLGIESIMINSNPETVSTDYDTSDRLYFEPLTLEDVYR 656

Query: 713  VIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHRLPSASGDGLVRIWGTSPDSIDAAEDR 772
            +   E+PEG+I+QFGGQTPLKL+  + +           G   V+I GTSPDSID AEDR
Sbjct: 657  IYQNEKPEGVIIQFGGQTPLKLAKDLEK----------KG---VKILGTSPDSIDRAEDR 703

Query: 773  ERFNAIIKELSIEQPKGGIAKSEADALAIAKEIGYPVVVRPSYVLGGRAMEIVYTDETLV 832
            +RF  ++++L +  P+ GIA S  +A  IA +IGYPV+VRPSYVLGGRAM I+  ++ L 
Sbjct: 704  KRFIEVLEKLKLNSPESGIATSMEEAREIAHKIGYPVLVRPSYVLGGRAMLIINEEKELD 763

Query: 833  TYLENAVEVDPERPVLIDKYLSDAIEIDVDALADSCGNVVIGGIMEHIEQAGVHSGDSAC 892
             Y+E A E+  +RP+LID +L DA+E+DVDAL D   +V + GIMEHIE+AG+HSGDSAC
Sbjct: 764  RYMEKAEEISKDRPLLIDSFLEDAVEVDVDALCDG-KDVFVTGIMEHIEEAGIHSGDSAC 822

Query: 893  MIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNCQYAITTSGDVYLLEANPRASRTVPFV 952
            ++P +T+S + +D I   T+ L+  L V GL+N QYA+     +Y++E NPRASRTVPFV
Sbjct: 823  VLPPQTLSKNMMDEIRKATVNLSLELQVKGLINIQYAVKNE-ILYIIEVNPRASRTVPFV 881

Query: 953  SKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRS 1012
            SKA+GHP+ KYA  +M G+SL  L   KE+    VSVKE VLPF KF G D +LGPEMRS
Sbjct: 882  SKALGHPIVKYATRIMMGESLKSLPLPKEMTFSQVSVKEVVLPFNKFPGVDTILGPEMRS 941

Query: 1013 TGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVFLSLNDLTKPHLERIAKAFLDIGFKIVS 1072
            TGEVMGI  +   AF K+Q  AG +LP  GTVF+S+ND TK  L    K   ++GF +++
Sbjct: 942  TGEVMGIASTAGEAFLKSQYMAGDELPSQGTVFVSINDKTKAELLSYIKDLSELGFNLIA 1001

Query: 1073 TSGTAHFLELKGIAVERVLKMHEGR-PHAGDMVANGQIQMMVITSSGDSLDQIDGLKLRR 1131
            TSGT  FL   GI   ++ K+++G  P A D +   +I  ++I +    + + D   +R+
Sbjct: 1002 TSGTHKFLSENGILSSKINKVYDGVFPTALDYIRENKIH-LIINTPLSRVTRDDSFTIRQ 1060

Query: 1132 RGLAYKVPVITTVSGALANAEAIRSLKSNTVTMTALQDF 1170
              + +KVP +TT + A A  + +  +K+   T+ +LQ+ 
Sbjct: 1061 AAIRFKVPCLTTSNAAKALIKGMVEMKNKGFTIHSLQEI 1099



 Score =  231 bits (588), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 142/406 (34%), Positives = 225/406 (55%), Gaps = 21/406 (5%)

Query: 79  ASSKDQKLGKRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPAT 138
           +S  D+     T+ R ++ILG GP  IGQ  EFDY   QA  AL++ G E I+INSNP T
Sbjct: 574 SSYDDEDESDVTNARSVMILGGGPNRIGQGIEFDYCCCQASYALQDLGIESIMINSNPET 633

Query: 139 IMTDPGLADRTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGV 198
           + TD   +DR Y  P+T E V ++ + E+P+ ++   GGQT L LA        LEK GV
Sbjct: 634 VSTDYDTSDRLYFEPLTLEDVYRIYQNEKPEGVIIQFGGQTPLKLA------KDLEKKGV 687

Query: 199 ELIGAKLDAIKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAF 258
           +++G   D+I +AEDR  F + ++ + + +P SGI  +++E   IA++IG +P+++RP++
Sbjct: 688 KILGTSPDSIDRAEDRKRFIEVLEKLKLNSPESGIATSMEEAREIAHKIG-YPVLVRPSY 746

Query: 259 TLGGTGGGIAYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIIC 318
            LGG    I   ++E +   +     S    +L++  L    E +++ + D  D V +  
Sbjct: 747 VLGGRAMLIINEEKELDRYMEKAEEISKDRPLLIDSFLEDAVEVDVDALCDGKD-VFVTG 805

Query: 319 SIENVDPMGVHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVD 378
            +E+++  G+H+GDS  V P QTL+      +R  ++ +  E+ V+ G  N+Q+AV    
Sbjct: 806 IMEHIEEAGIHSGDSACVLPPQTLSKNMMDEIRKATVNLSLELQVK-GLINIQYAVK--- 861

Query: 379 GEVM-VIEMNPRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSI 437
            E++ +IE+NPR SR+    SKA G PI K A ++ +G SL        K  P   E + 
Sbjct: 862 NEILYIIEVNPRASRTVPFVSKALGHPIVKYATRIMMGESL--------KSLPLPKEMTF 913

Query: 438 DYVVTKIPRFAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKA 483
             V  K     F KFPG + +L  +M+S GE M +  T  E+F K+
Sbjct: 914 SQVSVKEVVLPFNKFPGVDTILGPEMRSTGEVMGIASTAGEAFLKS 959


>gi|312114891|ref|YP_004012487.1| carbamoyl-phosphate synthase large subunit [Rhodomicrobium vannielii
            ATCC 17100]
 gi|311220020|gb|ADP71388.1| carbamoyl-phosphate synthase, large subunit [Rhodomicrobium vannielii
            ATCC 17100]
          Length = 1109

 Score = 1245 bits (3222), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 632/1124 (56%), Positives = 816/1124 (72%), Gaps = 58/1124 (5%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD+  ILI+GAGPIVIGQACEFDYSGTQACKAL++EGY +IL+NSNPATIMTDP LA 
Sbjct: 3    KRTDIDSILIIGAGPIVIGQACEFDYSGTQACKALRQEGYRIILVNSNPATIMTDPDLAH 62

Query: 148  RTYITPMTPELVEQVLEKER---PD---ALLPTMGGQTALNLAVALAESGALEKYGVELI 201
             TYI P+TP++V +V+E+ER   PD   ALLPTMGGQTALN A+ LA  G L+++G+ELI
Sbjct: 63   ATYIEPITPDMVTKVIERERREHPDERMALLPTMGGQTALNTALKLARDGVLDRFGIELI 122

Query: 202  GAKLDAIKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLG 261
            GA  DAI KAEDR LF++AMK IG+ TP S +  TL E I     +   P IIRP+FTLG
Sbjct: 123  GANADAIDKAEDRQLFREAMKKIGLATPKSRLAQTLQEAIDALEHV-PLPAIIRPSFTLG 181

Query: 262  GTGGGIAYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIE 321
            GTGGGIAYN+EE+  IC+ GL AS T+Q+LVE+S+LGWKEYE+EV+RD  DN +IICSIE
Sbjct: 182  GTGGGIAYNREEYLHICERGLEASPTTQILVEESVLGWKEYEMEVVRDKKDNCIIICSIE 241

Query: 322  NVDPMGVHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEV 381
            NVDPMGVHTGDSITVAPA TLTD+EYQ +R+ SIA++REIGVE GGSNVQFAVNP DG++
Sbjct: 242  NVDPMGVHTGDSITVAPALTLTDREYQIMRNASIAVLREIGVETGGSNVQFAVNPADGKL 301

Query: 382  MVIEMNPRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITK-KTPASFEPSIDYV 440
            +VIEMNPRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDITK  TPASFEP+IDYV
Sbjct: 302  VVIEMNPRVSRSSALASKATGFPIAKVAAKLAVGYTLDELDNDITKGATPASFEPTIDYV 361

Query: 441  VTKIPRFAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVK 500
            VTKIPRFAFEKFPG+   LTT MKSVGEAMA+GRTF ES QKALRSLE G +G     ++
Sbjct: 362  VTKIPRFAFEKFPGAPTTLTTSMKSVGEAMAIGRTFHESLQKALRSLETGLTGLDDYLLE 421

Query: 501  ELDW--DWEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVE 558
             L    D   ++ +L  P+PDR+  +  A++ G+  ++IH L  ID WF+ + +E++DVE
Sbjct: 422  GLGKGDDKNVIREALGTPSPDRLLKVAQALRMGVDHEQIHALCRIDPWFIERLQEIVDVE 481

Query: 559  QFLLTQSVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCA 618
              +    +   T+  F E+K  GFSD ++A  +  TE EV EKR +L V P YKR+DTCA
Sbjct: 482  AKVREHGLPQ-TERSFRELKAMGFSDARLAALSGLTEAEVAEKRCALKVFPVYKRIDTCA 540

Query: 619  AEFEANTPYMYSSYDFE------CESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFS 672
            AEF + TPYMYS+Y+        CE+AP+ ++K++ILG GPNRIGQGIEFDYCCCH +FS
Sbjct: 541  AEFPSPTPYMYSTYESPLAGREMCEAAPSAREKIIILGSGPNRIGQGIEFDYCCCHAAFS 600

Query: 673  LQSAGYETIMMNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLE----RPEGIIVQFGG 728
            L  AGYETIM+N NPETVSTDYDTSDRLYFEPLT EDVL +I+ E    + +G+IVQFGG
Sbjct: 601  LSKAGYETIMVNCNPETVSTDYDTSDRLYFEPLTPEDVLAIIEKEASNGKLKGVIVQFGG 660

Query: 729  QTPLKLSLPIHQYLDEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPK 788
            QTPLKL+    Q L +  +P         I GTSPD+ID AEDR+RF A++++L++ QP+
Sbjct: 661  QTPLKLA----QTLADRGVP---------ILGTSPDAIDLAEDRDRFKALVEKLNLRQPQ 707

Query: 789  GGIAKSEADALAIAKEIGYPVVVRPSYVLGGRAMEIV--------YTDETLVTYLENAVE 840
             GIA S   ALA ++ IG+P+VVRPSYVLGGRAM I+        Y D TL  ++   V 
Sbjct: 708  NGIAYSIEQALAASEAIGFPIVVRPSYVLGGRAMAIIPNQASLKDYFDTTLAAFVPPDVH 767

Query: 841  -------------VDPERPVLIDKYLSDAIEIDVDALADSCGNVVIGGIMEHIEQAGVHS 887
                         V  +  +L+D Y+ DA E+DVDA++D   +V I G+MEHIE+AGVHS
Sbjct: 768  HRFGGNRHAEVNAVLAKNALLLDSYVRDATEVDVDAISDGT-DVFIAGVMEHIEEAGVHS 826

Query: 888  GDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNCQYAITTSGDVYLLEANPRASR 947
            GDSAC +P  ++    L  +   T  +A+ LNV GLMN QYA+   GDVY+LE NPRASR
Sbjct: 827  GDSACSLPPHSLCEKTLRELERQTADIARALNVVGLMNIQYAV-KDGDVYVLEVNPRASR 885

Query: 948  TVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPKHVSVKEAVLPFEKFQGCDVLLG 1007
            TVPFV+K IG+P+A  AA VM+G+ L D+        +HV VKEAV PFE+F   D +LG
Sbjct: 886  TVPFVAKVIGYPVAAIAARVMAGEKLADMNLKHRANVQHVGVKEAVFPFERFPEIDPVLG 945

Query: 1008 PEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVFLSLNDLTKPHLERIAKAFLDIG 1067
            PEMRSTGEVMGID ++ +AFAKAQ+A+G +LP +GT+F+S+ +  K  + +  +  +++G
Sbjct: 946  PEMRSTGEVMGIDKTYAVAFAKAQLASGSRLPTAGTLFVSVKESDKHRIVQPVRDLVEMG 1005

Query: 1068 FKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVANGQIQMMVITSSGDSLDQIDGL 1127
            FK+++T GTA  LE +GI   R+ K+ EGRP+  D + N ++ ++  T+ G +    D  
Sbjct: 1006 FKVLATRGTARHLEAQGIPCTRINKVLEGRPNIVDAMKNREVDLVFNTTEG-AKALADSS 1064

Query: 1128 KLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTVTMTALQDFF 1171
             +RR  L YK+P  TT++GALA  +++ ++++  + +  LQ + 
Sbjct: 1065 TIRRTALMYKIPYYTTIAGALAVTKSVAAMRAGILEVQPLQKYI 1108


>gi|261856156|ref|YP_003263439.1| carbamoyl-phosphate synthase, large subunit [Halothiobacillus
            neapolitanus c2]
 gi|261836625|gb|ACX96392.1| carbamoyl-phosphate synthase, large subunit [Halothiobacillus
            neapolitanus c2]
          Length = 1077

 Score = 1245 bits (3222), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 625/1086 (57%), Positives = 803/1086 (73%), Gaps = 20/1086 (1%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTDL+ ILI+GAGPIVIGQACEFDYSG QACKALKEEGY VILINSNPATIMTDPG+AD
Sbjct: 3    KRTDLKSILIIGAGPIVIGQACEFDYSGAQACKALKEEGYRVILINSNPATIMTDPGMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TY+ P+  E V  ++EKERPDA+LPTMGGQTALN A+ LA +G LEK+  ELIGA  DA
Sbjct: 63   ATYVEPINWETVAAIIEKERPDAILPTMGGQTALNCALDLARNGVLEKFNCELIGASEDA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I  AEDR+ F++AM  IG+ TP S + ++L+E     +++G FP+IIRP+FT+GG+GGGI
Sbjct: 123  IDMAEDRERFREAMADIGLSTPSSVVVHSLEEAFDALSDLG-FPVIIRPSFTMGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EE+E I + GL  S TS++L+E+S+LGWKEYE+EV+RD  DN +IICSIEN DPMG
Sbjct: 182  AYNREEYEEIVRRGLDLSPTSELLIEQSVLGWKEYEMEVVRDRNDNCIIICSIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ +R+ S+A++R+IGVE GGSNVQFAVNP +G ++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQIMRNASLAVLRKIGVETGGSNVQFAVNPENGAMIVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITK-KTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ N+IT+  TPASFEP+IDYVVTK+PR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGYTLDELRNEITQGATPASFEPTIDYVVTKVPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWD- 505
            F FEKFP ++  LTTQMKSVGE MA+GRTFQES QKALR LE G  G+     + LD + 
Sbjct: 362  FTFEKFPQADSRLTTQMKSVGEVMAIGRTFQESLQKALRGLEIGVDGFDEILDRNLDAED 421

Query: 506  -WEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQ 564
              ++L   LR P  DR+  +  A + G  ++++HE S ID WFL Q +++I  EQ L  Q
Sbjct: 422  AEDELIRQLREPRHDRLWYVADAFRHGFTLEDVHEHSKIDPWFLVQIEQIIRKEQELRGQ 481

Query: 565  SVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEAN 624
            S+ N+ +D  + +KR GFSD+++A     TE  VR  R  LGV P +KRVDTCAAEF  +
Sbjct: 482  SLLNLDRDALWRIKRMGFSDRRLARLLDETESTVRAHRHGLGVRPVFKRVDTCAAEFPTD 541

Query: 625  TPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMN 684
            T Y+YS+Y+  CE+ P+Q+ K++ILGGGPNRIGQGIEFDYCC H + +L+  G+ETIM+N
Sbjct: 542  TAYLYSTYEQFCEAEPSQRDKIMILGGGPNRIGQGIEFDYCCVHAALALREDGFETIMVN 601

Query: 685  SNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDE 744
             NPETVSTDYD SDRLYFE LT+EDVL +ID+E+P+G+IVQFGGQTPLKL+    + L++
Sbjct: 602  CNPETVSTDYDISDRLYFESLTLEDVLEIIDVEKPKGVIVQFGGQTPLKLA----RDLEK 657

Query: 745  HRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKE 804
               P         I GT+PD+ID AEDRERF A+I EL ++QP    A+S  +A+ +A +
Sbjct: 658  AGAP---------IIGTTPDAIDRAEDRERFQAMISELGLKQPPNRTARSTDEAINLAAQ 708

Query: 805  IGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDAL 864
            IGYP+VVRPSYVLGGRAMEIV+ +E L  Y+ +AV+   + PVL+D++L DA E+D+DA+
Sbjct: 709  IGYPLVVRPSYVLGGRAMEIVHNEEGLKRYMRDAVKASNDSPVLLDRFLDDATEMDIDAV 768

Query: 865  ADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLM 924
             D    VVIGG+MEHIE AGVHSGDSAC +P  T+++  L  + +    +AK LNV GLM
Sbjct: 769  CDG-ETVVIGGLMEHIEMAGVHSGDSACSLPPYTVAAPVLAEVRAQVTAMAKALNVVGLM 827

Query: 925  NCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIP 984
            N Q AI    +++++E NPRASRTVPFVSKA+G PLAK AA  M+G SL     T+E +P
Sbjct: 828  NTQVAI-QGNEIFIIEVNPRASRTVPFVSKAVGIPLAKIAARAMAGISLAKQSVTRECVP 886

Query: 985  KHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTV 1044
             + +VKEAV PF KF G D LLGPEM+STGEVMGI   F  AFAKAQ  AG  LP SG  
Sbjct: 887  PYYAVKEAVFPFIKFAGVDPLLGPEMKSTGEVMGIGREFGEAFAKAQAGAGNSLPTSGLA 946

Query: 1045 FLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMV 1104
            F+S+          +A+A    GF + +T GTA  L  +G+ VE V K+ EGRP+  DM+
Sbjct: 947  FVSVRKQDYFAAAAVARALSAQGFTLCATRGTARHLTEQGLTVESVNKVTEGRPNIVDMI 1006

Query: 1105 ANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTVTM 1164
             N +I +++ T++  +  + D  ++RR  L  +VP  TT++GA A A A+  L+   +++
Sbjct: 1007 KNKEITLIINTTTSSNQSRSDSFQIRREALHQRVPYFTTMAGAEAMALALAYLQ-QPISV 1065

Query: 1165 TALQDF 1170
              LQD 
Sbjct: 1066 NRLQDL 1071


>gi|416242322|ref|ZP_11633358.1| carbamoyl-phosphate synthase, large subunit [Moraxella catarrhalis
            BC7]
 gi|326570906|gb|EGE20930.1| carbamoyl-phosphate synthase, large subunit [Moraxella catarrhalis
            BC7]
          Length = 1078

 Score = 1245 bits (3221), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 620/1079 (57%), Positives = 792/1079 (73%), Gaps = 34/1079 (3%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILI+GAGPIVIGQACEFDYSG QACKALKEEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIKSILIIGAGPIVIGQACEFDYSGAQACKALKEEGYRVILVNSNPATIMTDPSMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+T + VEQ++ KERPDA+LPTMGGQTALN A+ L + G L KYG ELIGA  +A
Sbjct: 63   ATYIEPITWQTVEQIIAKERPDAILPTMGGQTALNCALDLDKHGVLAKYGCELIGATKEA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I+KAEDR+LF +AMK IG++ P + I  ++D+  +I  ++G FP IIRP+FT+GG+GGGI
Sbjct: 123  IEKAEDRELFDKAMKKIGLECPKAEIAQSMDDAFAIQAKVG-FPCIIRPSFTMGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEF  IC+ G   S T Q+L+++SL+GWKEYE+EV+RD  DN +I+CSIEN DPMG
Sbjct: 182  AYNREEFIEICERGFDLSPTHQLLIDESLIGWKEYEMEVVRDKKDNCIIVCSIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ +R+ SIA++REIGVE GGSNVQF +NP  G ++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQIMRNASIAVLREIGVETGGSNVQFGINPKTGRMVVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT  KTPASFEP+IDYVVTK+PR
Sbjct: 302  PRVSRSSALASKATGFPIAKIAAKLAVGYTLDELKNDITGGKTPASFEPAIDYVVTKMPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            F FEKFP +E +LTTQMKSVGE MA+GR FQES QKALR LE G +G+     ++LD++ 
Sbjct: 362  FNFEKFPQAESVLTTQMKSVGEVMAIGRNFQESMQKALRGLEIGVTGFD----EQLDFEQ 417

Query: 507  EQ------LKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQF 560
                    LK  L+ P P+R+  I  A++ G+ VD++   + ID WFL Q ++++  E  
Sbjct: 418  NDDSIISTLKLKLKTPTPERIFYIADALRFGLSVDDVFADTNIDPWFLVQIEDIVHTENQ 477

Query: 561  LLTQSVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAE 620
            L T  + ++T +    +KR+G SD +IA     +EK+ R+ R ++G+ P YKRVDTCAAE
Sbjct: 478  LKTLGMGDLTPNLLRRLKRKGLSDARIAKLMGVSEKQFRKTRWNMGIYPVYKRVDTCAAE 537

Query: 621  FEANTPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYET 680
            FE +T YMYS+YD ECE+ P+ K+K++++GGGPNRIGQGIEFDYCC H + +++  GYET
Sbjct: 538  FETSTAYMYSTYDEECEANPSNKEKIMVIGGGPNRIGQGIEFDYCCVHAALAMREDGYET 597

Query: 681  IMMNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQ 740
            IM+N NPETVSTDYDTSDRLYFEP+T+EDVL ++  E+P+G+IVQ+GGQTPLKL+  + Q
Sbjct: 598  IMVNCNPETVSTDYDTSDRLYFEPITLEDVLEIVRTEQPKGVIVQYGGQTPLKLARSLEQ 657

Query: 741  YLDEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALA 800
                           V I GTSPD+ID AEDRERF  +I +L++ QP   I KS  + + 
Sbjct: 658  -------------AGVPIIGTSPDAIDRAEDRERFLQMINKLNLRQPNNSIVKSSEEGIR 704

Query: 801  IAKEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEID 860
             A ++GYP+VVRPSYVLGGRAMEIVY ++ L  YL +AV+   E PVL+D +L DAIE+D
Sbjct: 705  EAAKVGYPLVVRPSYVLGGRAMEIVYNEDELKRYLRDAVQASHEAPVLLDHFLDDAIEVD 764

Query: 861  VDALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNV 920
            VD ++D    VVIGGIM+HIEQAGVHSGDSAC IP  ++S    D +   T+ +AK L V
Sbjct: 765  VDCVSDG-KEVVIGGIMQHIEQAGVHSGDSACSIPPYSLSDDIQDDMRRQTVAMAKELGV 823

Query: 921  CGLMNCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTK 980
             GLMN Q+AI     VY+LE NPRASRTVPFVSK IG  LAK AA  M+G++L +  FT+
Sbjct: 824  VGLMNVQFAIKGE-TVYVLEVNPRASRTVPFVSKCIGVSLAKVAARCMAGQTLAEQNFTQ 882

Query: 981  EVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQK--- 1037
            E++P H SVKEAV PF KF G D +LGPEM+STGEVMG+  +F  A+ KA + +G +   
Sbjct: 883  EIVPSHYSVKEAVFPFAKFPGVDPILGPEMKSTGEVMGVGQTFGEAYYKATLGSGDRLTG 942

Query: 1038 LPLSG---TVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMH 1094
            LP  G   TVF+S+ +  K  +  +AK     GF IV+T GT   L   G+A +RV K+ 
Sbjct: 943  LPQEGETKTVFISVRNSDKAGVVDVAKRLAGFGFNIVATGGTHDMLVGAGVACKRVNKVS 1002

Query: 1095 EGRPHAGDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEA 1153
            EGRPH  DM+ NGQI + + T+ G    + D   +RR  L  K+ V  T++   A  EA
Sbjct: 1003 EGRPHIVDMMKNGQIHLAINTTEGKQALK-DSFPIRREALQNKILVANTLNAGRAVCEA 1060


>gi|261401908|ref|ZP_05988033.1| carbamoyl-phosphate synthase, large subunit [Neisseria lactamica ATCC
            23970]
 gi|269207923|gb|EEZ74378.1| carbamoyl-phosphate synthase, large subunit [Neisseria lactamica ATCC
            23970]
          Length = 1071

 Score = 1245 bits (3221), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 624/1070 (58%), Positives = 794/1070 (74%), Gaps = 22/1070 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTDL+ ILI+GAGPIVIGQACEFDYSG QACKAL+EEGY+VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDLKSILIIGAGPIVIGQACEFDYSGAQACKALREEGYKVILVNSNPATIMTDPEMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  + VE+++ KERPDA+LPTMGGQTALN A+ LA +G L KY VELIGA  DA
Sbjct: 63   VTYIEPIMWQTVEKIIAKERPDAILPTMGGQTALNCALDLARNGVLAKYNVELIGATEDA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  FK+AM+ IG+  P S + +T++E ++   ++G FP +IRP+FT+GG+GGGI
Sbjct: 123  IDKAEDRGRFKEAMEKIGLSCPKSFVCHTMNEALAAQEQVG-FPTLIRPSFTMGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYNK+EF AIC+ G  AS T ++L+E+S+LGWKEYE+EV+RD  DN +IICSIEN DPMG
Sbjct: 182  AYNKDEFLAICERGFDASPTHELLIEQSVLGWKEYEMEVVRDKNDNCIIICSIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGV+ GGSNVQFAVNP +GE++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQIMRNASLAVLREIGVDTGGSNVQFAVNPENGEMIVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VG++LD++ NDIT  KTPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGFTLDELRNDITGGKTPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            FAFEKFP ++  LTTQMKSVGE MA+GRT QESFQKALR LE G  G+   +      D 
Sbjct: 362  FAFEKFPAADDRLTTQMKSVGEVMAMGRTIQESFQKALRGLETGLCGFNPRS-----SDK 416

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
             +++  L  P P+RM  +  A + G  ++EIHE+  ID WFL Q ++L+  E+ +    +
Sbjct: 417  AEIRRELANPGPERMLFVADAFRAGFTLEEIHEICAIDPWFLAQIEDLVKEEKAVSDGIL 476

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
            S++       +KR+GFSDK+IA      EKEVRE R +L + P YKRVDTCAAEF   T 
Sbjct: 477  SDLDYAALRRLKRKGFSDKRIAQLLGIKEKEVREHRYALKLHPVYKRVDTCAAEFATETA 536

Query: 627  YMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSN 686
            Y+YS+Y+ ECE+ P+ +KKV+ILGGGPNRIGQGIEFDYC  H + +L+ +G+ETIM+N N
Sbjct: 537  YLYSTYEEECEARPSDRKKVMILGGGPNRIGQGIEFDYCRVHAALALRESGFETIMVNCN 596

Query: 687  PETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHR 746
            PETVSTD+DTSDRLYFEPLT+EDVL ++  E P G+IV +GGQTPLKL+  +        
Sbjct: 597  PETVSTDFDTSDRLYFEPLTLEDVLEIVRTENPWGVIVHYGGQTPLKLANAL-------- 648

Query: 747  LPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEIG 806
               A+G   V I GTS DSIDAAEDRERF  ++ +L + QP   IA +E +AL  A+EIG
Sbjct: 649  --VANG---VNIIGTSADSIDAAEDRERFQKVLNDLGLRQPPNRIAHNEEEALVKAEEIG 703

Query: 807  YPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALAD 866
            YP+VVRPSYVLGGRAM+IV++ E L  Y+  AV+V  + PVL+D +L++AIE+DVD ++D
Sbjct: 704  YPLVVRPSYVLGGRAMQIVHSAEALQKYMREAVQVSEDSPVLLDFFLNNAIEVDVDCVSD 763

Query: 867  SCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNC 926
               +VVIGGIM+H+EQAG+HSGDS C +P  ++S    D I   T  +A  L V GLMN 
Sbjct: 764  G-KDVVIGGIMQHVEQAGIHSGDSGCSLPPYSLSEEIQDEIRRQTKAMAYALGVIGLMNV 822

Query: 927  QYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPKH 986
            Q+A+   G V++LE NPRASRTVPFVSKA G PLAK  A  M+G SL + G  KEV+P  
Sbjct: 823  QFAV-QDGVVFVLEVNPRASRTVPFVSKATGVPLAKVGARCMAGISLKEQGVEKEVVPDF 881

Query: 987  VSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVFL 1046
             +VKEAV PF KF G D +LGPEMRSTGEVMG+  SF  A+ KAQ+ AG++L  +G +FL
Sbjct: 882  YAVKEAVFPFIKFPGVDTILGPEMRSTGEVMGVGASFGEAYYKAQLGAGERLNPTGKIFL 941

Query: 1047 SLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVAN 1106
            S+ +  K  + + AK F  +G+ I +T GTA +L   G+ V+ + K+ EGRPH GD + N
Sbjct: 942  SVREEDKERVIKTAKNFQALGYGICATRGTAQYLTEHGLIVQTINKVPEGRPHIGDALKN 1001

Query: 1107 GQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRS 1156
            G+I ++V T S D     D   +R+  L  +VP  TT +G  A +E  +S
Sbjct: 1002 GEIALVVNTVSSDPQSVSDSHIIRQSALQQRVPQYTTTAGGEAMSEGAKS 1051


>gi|392950773|ref|ZP_10316328.1| carbamoyl-phosphate synthase large subunit [Hydrocarboniphaga effusa
            AP103]
 gi|391859735|gb|EIT70263.1| carbamoyl-phosphate synthase large subunit [Hydrocarboniphaga effusa
            AP103]
          Length = 1074

 Score = 1245 bits (3221), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 628/1073 (58%), Positives = 781/1073 (72%), Gaps = 18/1073 (1%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTDL+ ILI+GAGPIVIGQACEFDYSG QACKAL+ EGY VIL+NSNPATIMTDP  AD
Sbjct: 3    KRTDLKSILIIGAGPIVIGQACEFDYSGAQACKALRAEGYRVILVNSNPATIMTDPDTAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  + V +++E ERPDA+LPTMGGQTALN A+ LA +G L+K+ VE+IGA   A
Sbjct: 63   ATYIEPIRWQTVAKIIEAERPDAVLPTMGGQTALNCALDLARNGVLKKFNVEMIGANEHA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I  AEDR  F+ AM  IG+ +  SG+ +++DE   I  +IG +P+IIRP+FTLGG+GGG+
Sbjct: 123  IDLAEDRQKFRDAMTEIGLGSARSGVAHSMDEARYIQEQIG-YPVIIRPSFTLGGSGGGV 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN EEFE I   GL  S T++VL+E+SLLGWKE+E+EV+RD  DN +I+CSIEN DPMG
Sbjct: 182  AYNVEEFEEIVTRGLDLSPTTEVLIEESLLGWKEFEMEVVRDRKDNCIIVCSIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ LRD SI ++R+IGV+ GGSNVQFA++P DG ++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQLLRDASIKVLRKIGVDTGGSNVQFAISPTDGRIIVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKK-TPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ N+IT   TPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGYTLDELRNEITGGVTPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            F FEKFP ++  LTTQMKSVGE MA+GR FQES  KA+R LE G  G+        + + 
Sbjct: 362  FTFEKFPQADSRLTTQMKSVGEVMAMGRNFQESLLKAMRGLETGSDGFDPQVPDFREANL 421

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
            ++++  L      R+  +  A + GM VDE+H LS ID WFL Q  ELI  E  +     
Sbjct: 422  DKIREELITARAKRLWFVGDAFRSGMSVDEVHRLSKIDPWFLEQIHELIATEAEIAKLDR 481

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
            S ++ D     KR GFSD+++A      E +VR+ R +LGV P YKRVD+CAAEF + T 
Sbjct: 482  SKISADQLRRYKRLGFSDRRLAKLLGYDELDVRKLRHALGVRPVYKRVDSCAAEFASTTA 541

Query: 627  YMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSN 686
            YMYSSYD ECE+APT +KK+++LGGGPNRIGQGIEFDYCC H S +L+  GYETIM+N N
Sbjct: 542  YMYSSYDEECEAAPTDRKKIVVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVNCN 601

Query: 687  PETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHR 746
            PETVSTDYDTSDRLYFEPLT EDV+ +IDLE+P G+IVQFGGQTPLKL+          R
Sbjct: 602  PETVSTDYDTSDRLYFEPLTFEDVMEIIDLEKPIGVIVQFGGQTPLKLA----------R 651

Query: 747  LPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEIG 806
               A+G     I GT+PD+ID AEDRERF  ++ EL + QP  G+A S   ALA+A ++G
Sbjct: 652  QLEAAG---APIIGTTPDAIDLAEDRERFQKLVDELKLRQPPNGVATSNEQALAVAAKVG 708

Query: 807  YPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALAD 866
            YP+VVRPSYVLGGRAMEIV+ DE L  Y+  AV+V  + PVL+D++L++AIE+DVDALAD
Sbjct: 709  YPLVVRPSYVLGGRAMEIVHDDEDLNRYMTEAVKVSNDSPVLLDRFLNNAIEVDVDALAD 768

Query: 867  SCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNC 926
                VVIGG+MEHIE+AGVHSGDSAC +P  ++    +D I +   KLA+ LNV GLMN 
Sbjct: 769  G-ERVVIGGVMEHIEEAGVHSGDSACSLPPYSLPKHVVDDIRAQMEKLARALNVVGLMNA 827

Query: 927  QYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPKH 986
            Q+A+     VYLLE NPRASRT PFVSKA G PLAK AA  M+G+SL   G  KE+IP +
Sbjct: 828  QFAVQGE-TVYLLEVNPRASRTSPFVSKATGRPLAKIAARCMAGQSLASQGVDKEIIPAY 886

Query: 987  VSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVFL 1046
             SVKE+V PF KF G D LLGPEMRSTGEVMG+ + F  AF K+ +AAG  +P  GT F+
Sbjct: 887  YSVKESVFPFGKFPGVDPLLGPEMRSTGEVMGVGVHFGEAFNKSLLAAGMTVPRQGTAFI 946

Query: 1047 SLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVAN 1106
            S+ D  K     +A+      F++V+T GTA  +   GIA E V K+ EGRPH  DM+ N
Sbjct: 947  SVRDSDKAKAVDLARLLAAKNFRVVATHGTAELIRKAGIACEGVNKVKEGRPHCVDMIKN 1006

Query: 1107 GQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKS 1159
            G+IQ +  T+ G    + +   +R   + +K+   TT+SGA A A A+  L +
Sbjct: 1007 GEIQFIANTTEGKRSIE-ESRSIRAAAIQHKLCYFTTISGAYAAAIAMDHLDA 1058


>gi|359442336|ref|ZP_09232205.1| carbamoyl-phosphate synthase large subunit [Pseudoalteromonas sp.
            BSi20429]
 gi|358035790|dbj|GAA68454.1| carbamoyl-phosphate synthase large subunit [Pseudoalteromonas sp.
            BSi20429]
          Length = 1072

 Score = 1245 bits (3221), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 621/1077 (57%), Positives = 790/1077 (73%), Gaps = 18/1077 (1%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILILGAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPDMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  E+VE+++EKE+PDA+LPTMGGQTALN A+ L + G L K+GVELIGA  DA
Sbjct: 63   ATYIEPIHWEVVEKIIEKEKPDAVLPTMGGQTALNCALELDKHGVLAKHGVELIGATADA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAE+R+ F  AMK IG++ P + I +++DE   I   IG  P IIRP+FT+GGTGGG+
Sbjct: 123  IDKAENRERFDVAMKNIGLECPRAEIAHSMDEAKDIITRIG-LPCIIRPSFTMGGTGGGV 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN EEFE IC+ GL  S T+++L+++SL+GWKEYE EV+RD  DN +I+C+IEN DPMG
Sbjct: 182  AYNLEEFEEICERGLDLSPTNELLIDESLIGWKEYETEVVRDKNDNCIIVCTIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGVE GGSNVQF +NP DG +++IEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQIMRNASMAVLREIGVETGGSNVQFGINPEDGRMVIIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITK-KTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT  KTPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKIAAKLAVGYTLDELQNDITGGKTPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            F FEKF G+   LTTQMKSVGE MA+GR  QES  KALR LE G +G+      +     
Sbjct: 362  FNFEKFAGANDRLTTQMKSVGEVMAIGRNQQESLHKALRGLEVGATGFNPIVALDDPKAK 421

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
            E++   LR P  +R+  I  AM+ GM VD+++EL+ +++WFL Q ++++  E  +    +
Sbjct: 422  EKIIRELREPGAERIWYIADAMRHGMSVDDVYELTKVNRWFLVQIEDILKDEAKIAKVGM 481

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
            + +  D   ++KR+GF+D +IA     +E E+R+KR  L ++P YKRVDTCAAEF ++T 
Sbjct: 482  AGLNADFLRKLKRKGFADPRIAEIAGVSEAEIRKKRHLLNIVPVYKRVDTCAAEFSSDTA 541

Query: 627  YMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSN 686
            YMYS+YD ECE+ PT + K++++GGGPNRIGQGIEFDYCC H S +L+  GYETIM+N N
Sbjct: 542  YMYSTYDEECEANPTDRDKIMVIGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVNCN 601

Query: 687  PETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHR 746
            PETVSTDYDTSDRLYFEP+T+EDVL ++ +E+P+G+IVQ+GGQTPLKL+          R
Sbjct: 602  PETVSTDYDTSDRLYFEPITLEDVLEIVRVEKPKGVIVQYGGQTPLKLA----------R 651

Query: 747  LPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEIG 806
               A+G   V + GTSPD+ID AEDRERF  +++ L++ QP+   A S  +AL  + EIG
Sbjct: 652  ELEANG---VPVIGTSPDAIDRAEDRERFQQLVERLNLLQPENATATSTEEALLKSVEIG 708

Query: 807  YPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALAD 866
            +P+VVRPSYVLGGRAMEIVY ++ L  Y+  AV+   E PVL+D++L +AIE+DVDA+ D
Sbjct: 709  FPLVVRPSYVLGGRAMEIVYDEDDLRRYMTEAVQASNEAPVLLDRFLDNAIEVDVDAICD 768

Query: 867  SCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNC 926
                V+IGGIMEHIEQAGVHSGDSAC +P  ++S    D +      +A  L V GLMN 
Sbjct: 769  G-EQVIIGGIMEHIEQAGVHSGDSACSLPAHSLSQEVQDVMRKQVTDMALELGVVGLMNT 827

Query: 927  QYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPKH 986
            Q+A+   G VYL+E NPRA+RTVPFVSKA G  LAK AA  M+G+SL   G TKEVIP +
Sbjct: 828  QFAV-KDGKVYLIEVNPRAARTVPFVSKATGVALAKVAARCMAGQSLASQGITKEVIPPY 886

Query: 987  VSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVFL 1046
             SVKE VLPF KFQG D + GPEMRSTGEVMG+  +F  AFAKAQ+ A   LP  G   L
Sbjct: 887  YSVKEVVLPFAKFQGVDPIRGPEMRSTGEVMGVGDTFAEAFAKAQLGASNTLPRGGRALL 946

Query: 1047 SLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVAN 1106
            S+ +  KP +  +AK   D+GF++ +T GTA  LE  GI V RV K++EGRPH  D + N
Sbjct: 947  SVRNSDKPRIVELAKIMTDLGFELDATGGTAQALEEAGIEVRRVNKVYEGRPHILDYIKN 1006

Query: 1107 GQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTVT 1163
             +   +V T+ G    + D   LRR  L  K    TT++ A AN  A ++   + VT
Sbjct: 1007 KEYSYIVNTTEGRQAIE-DSKVLRRGALQNKTNYTTTLNAAFANCTANKADDRSKVT 1062


>gi|392550288|ref|ZP_10297425.1| carbamoyl phosphate synthase large subunit [Pseudoalteromonas
            spongiae UST010723-006]
          Length = 1072

 Score = 1245 bits (3221), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 624/1077 (57%), Positives = 791/1077 (73%), Gaps = 18/1077 (1%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KR D++ ILILGAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRNDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  E+VE+++EKE+PDA+LPTMGGQTALN A+ L + G L K+GVELIGA  DA
Sbjct: 63   ATYIEPIHWEVVERIIEKEKPDAVLPTMGGQTALNCALDLDKHGVLAKHGVELIGATADA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAE+R+ F  AMK IG++ P + I +++DE       IG FP IIRP+FT+GGTGGG+
Sbjct: 123  IDKAENRERFDAAMKAIGLECPRAEIAHSMDEARDTLTRIG-FPCIIRPSFTMGGTGGGV 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN EEFE IC  GL  S TS++L+++SLLGWKEYE+EV+RD  DN +I+CSIEN DPMG
Sbjct: 182  AYNMEEFEEICTRGLDLSPTSELLIDESLLGWKEYEMEVVRDKNDNCIIVCSIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGVE GGSNVQF VNP DG +++IEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQLMRNASMAVLREIGVETGGSNVQFGVNPADGRMVIIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT   TPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKIAAKLAVGYTLDELQNDITGGATPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            F FEKF GS   LTTQMKSVGE MA+GR  QES  KALR LE G +G+      +     
Sbjct: 362  FNFEKFAGSNDRLTTQMKSVGEVMAIGRNQQESLHKALRGLEVGATGFNPIVALDDPNAK 421

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
            E++   LR P  +R+  +  AM+ GM V+++ EL+ ID+W+L Q +++I  E  ++   +
Sbjct: 422  EKIVRELREPGAERIWYVADAMRHGMSVEDVFELTKIDRWYLVQIEDIIKDEAKIVEGGM 481

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
            + + KD    +KR+GF+D +IA     +E EVR+KR +L V+P YKRVDTCAAEF ++T 
Sbjct: 482  AGLNKDFLRSLKRKGFADARIAELLGVSEAEVRKKRHTLEVLPVYKRVDTCAAEFSSDTA 541

Query: 627  YMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSN 686
            YMYSSYD ECE+ P+ K K++++GGGPNRIGQGIEFDYCC H + +++  GYETIM+N N
Sbjct: 542  YMYSSYDEECEANPSDKDKIMVIGGGPNRIGQGIEFDYCCVHAALAMREDGYETIMVNCN 601

Query: 687  PETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHR 746
            PETVSTDYDTSDRL+FEP+T+EDVL ++ +E+P+G+IVQ+GGQTPLKL+          R
Sbjct: 602  PETVSTDYDTSDRLFFEPITLEDVLEIVRVEKPKGVIVQYGGQTPLKLA----------R 651

Query: 747  LPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEIG 806
               A+G   V I GTSPD+ID AEDRERF  +++ L + QP+     S  +A+A + EIG
Sbjct: 652  ELEANG---VPIIGTSPDAIDRAEDRERFQQMVERLDLLQPENATVTSLEEAVAKSAEIG 708

Query: 807  YPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALAD 866
            +P+VVRPSYVLGGRAMEIVY ++ L  Y+  AV+   E PVL+D++L DAIEIDVDA+ D
Sbjct: 709  FPLVVRPSYVLGGRAMEIVYDEDDLRRYMTEAVQASNEAPVLLDRFLDDAIEIDVDAICD 768

Query: 867  SCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNC 926
                V+IGGIMEHIEQAGVHSGDSAC +P  ++S    D +     ++A  L V GLMN 
Sbjct: 769  G-EQVIIGGIMEHIEQAGVHSGDSACSLPAYSLSPEIQDRMRDQVTRMALELGVVGLMNT 827

Query: 927  QYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPKH 986
            Q+A+   G+VYL+E NPRA+RTVPFVSKA G  LAK AA  M+G+SL   G TKE+IP +
Sbjct: 828  QFAV-KDGEVYLIEVNPRAARTVPFVSKATGVALAKVAARCMAGQSLASQGVTKEIIPPY 886

Query: 987  VSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVFL 1046
             SVKE VLPF KF G D + GPEMRSTGEVMG+  +F  AFAKAQ+ AG  +P  G   L
Sbjct: 887  YSVKEVVLPFAKFPGVDPMRGPEMRSTGEVMGVGDTFADAFAKAQLGAGNVMPRGGRALL 946

Query: 1047 SLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVAN 1106
            S+ +  K  +  +A+   D+GF++ +T GTA  LE  GI   RV K++EGRPH  D + N
Sbjct: 947  SVRNSDKKRIVELARTMRDLGFELDATGGTAKALEDAGIEARRVNKVYEGRPHILDRIKN 1006

Query: 1107 GQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTVT 1163
            G+   +V T+ G    + D   LRR  L  KV   TT++ A AN +A  +   +TV+
Sbjct: 1007 GEYSYIVNTTEGRQAIE-DSKVLRRGALQGKVNYTTTLNAAFANCKAHAADDRSTVS 1062



 Score =  246 bits (627), Expect = 8e-62,   Method: Compositional matrix adjust.
 Identities = 164/466 (35%), Positives = 257/466 (55%), Gaps = 35/466 (7%)

Query: 32  RSFLYSNKKTGSLSLRSWPPQLTRYSRSRVRASS---------AKIDS-SAELSNGAA-- 79
           + FL S K+ G    R    +L   S + VR             ++D+ +AE S+  A  
Sbjct: 486 KDFLRSLKRKGFADARI--AELLGVSEAEVRKKRHTLEVLPVYKRVDTCAAEFSSDTAYM 543

Query: 80  -SSKDQKL-GKRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPA 137
            SS D++     +D  KI+++G GP  IGQ  EFDY    A  A++E+GYE I++N NP 
Sbjct: 544 YSSYDEECEANPSDKDKIMVIGGGPNRIGQGIEFDYCCVHAALAMREDGYETIMVNCNPE 603

Query: 138 TIMTDPGLADRTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYG 197
           T+ TD   +DR +  P+T E V +++  E+P  ++   GGQT L LA        LE  G
Sbjct: 604 TVSTDYDTSDRLFFEPITLEDVLEIVRVEKPKGVIVQYGGQTPLKLA------RELEANG 657

Query: 198 VELIGAKLDAIKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPA 257
           V +IG   DAI +AEDR+ F+Q ++ + +  P +    +L+E ++ + EIG FPL++RP+
Sbjct: 658 VPIIGTSPDAIDRAEDRERFQQMVERLDLLQPENATVTSLEEAVAKSAEIG-FPLVVRPS 716

Query: 258 FTLGGTGGGIAYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVII 317
           + LGG    I Y++++        + AS  + VL+++ L    E +++ + D  + V+I 
Sbjct: 717 YVLGGRAMEIVYDEDDLRRYMTEAVQASNEAPVLLDRFLDDAIEIDVDAICD-GEQVIIG 775

Query: 318 CSIENVDPMGVHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPV 377
             +E+++  GVH+GDS    PA +L+ +   R+RD    +  E+GV  G  N QFAV   
Sbjct: 776 GIMEHIEQAGVHSGDSACSLPAYSLSPEIQDRMRDQVTRMALELGV-VGLMNTQFAVK-- 832

Query: 378 DGEVMVIEMNPRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSI 437
           DGEV +IE+NPR +R+    SKATG  +AK+AA+   G SL      +TK+    +    
Sbjct: 833 DGEVYLIEVNPRAARTVPFVSKATGVALAKVAARCMAGQSL--ASQGVTKEIIPPY---- 886

Query: 438 DYVVTKIPRFAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKA 483
            Y V ++    F KFPG +P+   +M+S GE M +G TF ++F KA
Sbjct: 887 -YSVKEVV-LPFAKFPGVDPMRGPEMRSTGEVMGVGDTFADAFAKA 930


>gi|417770444|ref|ZP_12418352.1| carbamoyl-phosphate synthase, large subunit [Leptospira interrogans
            serovar Pomona str. Pomona]
 gi|418682661|ref|ZP_13243875.1| carbamoyl-phosphate synthase, large subunit [Leptospira interrogans
            serovar Pomona str. Kennewicki LC82-25]
 gi|418706666|ref|ZP_13267509.1| carbamoyl-phosphate synthase, large subunit [Leptospira interrogans
            serovar Hebdomadis str. R499]
 gi|418712727|ref|ZP_13273459.1| carbamoyl-phosphate synthase, large subunit [Leptospira interrogans
            str. UI 08452]
 gi|421125659|ref|ZP_15585904.1| carbamoyl-phosphate synthase, large subunit [Leptospira interrogans
            serovar Grippotyphosa str. 2006006986]
 gi|421135270|ref|ZP_15595394.1| carbamoyl-phosphate synthase, large subunit [Leptospira interrogans
            serovar Grippotyphosa str. Andaman]
 gi|400325583|gb|EJO77858.1| carbamoyl-phosphate synthase, large subunit [Leptospira interrogans
            serovar Pomona str. Kennewicki LC82-25]
 gi|409947585|gb|EKN97581.1| carbamoyl-phosphate synthase, large subunit [Leptospira interrogans
            serovar Pomona str. Pomona]
 gi|410020528|gb|EKO87329.1| carbamoyl-phosphate synthase, large subunit [Leptospira interrogans
            serovar Grippotyphosa str. Andaman]
 gi|410436765|gb|EKP85876.1| carbamoyl-phosphate synthase, large subunit [Leptospira interrogans
            serovar Grippotyphosa str. 2006006986]
 gi|410763761|gb|EKR34485.1| carbamoyl-phosphate synthase, large subunit [Leptospira interrogans
            serovar Hebdomadis str. R499]
 gi|410790805|gb|EKR84494.1| carbamoyl-phosphate synthase, large subunit [Leptospira interrogans
            str. UI 08452]
 gi|455665738|gb|EMF31240.1| carbamoyl-phosphate synthase, large subunit [Leptospira interrogans
            serovar Pomona str. Fox 32256]
          Length = 1106

 Score = 1245 bits (3221), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 637/1119 (56%), Positives = 804/1119 (71%), Gaps = 58/1119 (5%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            +R D+R +LILG+GPIVIGQACEFDYSGTQA KALKE+G  VIL+NSNPATIMTDP LAD
Sbjct: 3    RREDIRSVLILGSGPIVIGQACEFDYSGTQAAKALKEKGIRVILLNSNPATIMTDPDLAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TY+ PMT  +V+++LEKE+PDA+LPT+GGQTALNLA+A   +G LEKY VELIGAK+DA
Sbjct: 63   ATYVEPMTVPVVQKILEKEKPDAILPTVGGQTALNLALACNSAGILEKYNVELIGAKVDA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            IKKAEDR+LFK+AM+ IGV+ P SG+ N L + + I N++G  PLI+RPAFTLGGTGGGI
Sbjct: 123  IKKAEDRELFKKAMEKIGVRVPASGLANNLKDAVEIKNKLG-LPLIVRPAFTLGGTGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AY +E FE +   GL AS  SQVL+E+S+LGWKE+ELEVMRDLADNVVIICSIEN+DPMG
Sbjct: 182  AYTEETFEEVVSKGLKASPISQVLLEESVLGWKEFELEVMRDLADNVVIICSIENIDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAP QTL+DKEYQ LRD SIAIIREIGVE GGSN+QFAVNP +G+V+VIEMN
Sbjct: 242  VHTGDSITVAPQQTLSDKEYQNLRDMSIAIIREIGVETGGSNIQFAVNPTNGDVIVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRF 447
            PRVSRSSALASKATGFPIAK+AA LS+GY+LD+I NDIT+ TPASFEPSIDYVVTK+PRF
Sbjct: 302  PRVSRSSALASKATGFPIAKIAALLSIGYTLDEIKNDITRVTPASFEPSIDYVVTKVPRF 361

Query: 448  AFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSN-VKEL---- 502
            AFEKFPG++  L  QMK+VGEAMA+GRTF+ESFQKALRSLE    G+G     +EL    
Sbjct: 362  AFEKFPGTDDTLGVQMKAVGEAMAIGRTFKESFQKALRSLEIDRYGFGSDGYFQELLYSR 421

Query: 503  ----DWDWEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVE 558
                D   E +   L+ PN  R+  +  A  +G  VD+IH+L  ID+WFL Q + L+ +E
Sbjct: 422  SLNNDQRKEWIDSHLKRPNDKRIFYVKLAFDEGYTVDQIHDLCKIDRWFLWQMEGLLKLE 481

Query: 559  QFLLTQSVSNMTKDDFYEVKRRGFSDKQIAFAT--------------------------K 592
                 +  S       Y++K+ GFS++Q++F                            K
Sbjct: 482  -----KEYSEKGNSILYKMKQVGFSNRQLSFLKNKKQILDLLDGNLRVDLKKTEIQNLLK 536

Query: 593  STEKEVREKRLSLGVIPSYKRVDTCAAEFEANTPYMYSSYDFECESAPTQKKKVLILGGG 652
             +E+E+  +  S  ++P YKR+DTCA EFEA TPY YSSYD E ES  T  K V+ILGGG
Sbjct: 537  LSEEEIEVELGSKKILPVYKRIDTCAGEFEAYTPYFYSSYDEEDESDVTNAKSVMILGGG 596

Query: 653  PNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSNPETVSTDYDTSDRLYFEPLTVEDVLN 712
            PNRIGQGIEFDYCCC  S++LQ  G E+IM+NSNPETVSTDYDTSDRLYFEPLT+EDV  
Sbjct: 597  PNRIGQGIEFDYCCCQASYALQDLGIESIMINSNPETVSTDYDTSDRLYFEPLTLEDVYR 656

Query: 713  VIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHRLPSASGDGLVRIWGTSPDSIDAAEDR 772
            +   E+PEG+I+QFGGQTPLKL+  + +           G   V+I GTSPDSID AEDR
Sbjct: 657  IYQNEKPEGVIIQFGGQTPLKLAKDLEK----------KG---VKILGTSPDSIDRAEDR 703

Query: 773  ERFNAIIKELSIEQPKGGIAKSEADALAIAKEIGYPVVVRPSYVLGGRAMEIVYTDETLV 832
            +RF  ++++L +  P+ GIA S  +A  IA +IGYPV+VRPSYVLGGRAM I+  ++ L 
Sbjct: 704  KRFVEVLEKLKLNSPESGIATSMEEAREIAHKIGYPVLVRPSYVLGGRAMLIINEEKELD 763

Query: 833  TYLENAVEVDPERPVLIDKYLSDAIEIDVDALADSCGNVVIGGIMEHIEQAGVHSGDSAC 892
             Y+E A E+  +RP+LID +L DAIE+DVDAL D    V + GIMEHIE+AG+HSGDSAC
Sbjct: 764  RYMEKAEEISRDRPLLIDSFLEDAIEVDVDALCDG-KEVFVTGIMEHIEEAGIHSGDSAC 822

Query: 893  MIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNCQYAITTSGDVYLLEANPRASRTVPFV 952
            ++P +T+S + +D I   T+ LA  L V GL+N QYA+     +Y++E NPRASRTVPFV
Sbjct: 823  VLPPQTLSKNMMDEIRKATVNLALELQVKGLINIQYAVKNE-ILYIIEVNPRASRTVPFV 881

Query: 953  SKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRS 1012
            SKA+GHP+ KYA  +M G+ L  L   KE+    VSVKE VLPF KF G D +LGPEMRS
Sbjct: 882  SKALGHPIVKYATRIMMGEPLKSLPLPKEMEFSQVSVKEVVLPFNKFPGVDTILGPEMRS 941

Query: 1013 TGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVFLSLNDLTKPHLERIAKAFLDIGFKIVS 1072
            TGEVMGI  +   AF K+Q  AG +LP  GTVF+S+ND TK  L    K   ++GF +++
Sbjct: 942  TGEVMGIASTAGEAFLKSQYMAGDELPSQGTVFVSINDKTKAELLSYIKDLSELGFNLIA 1001

Query: 1073 TSGTAHFLELKGIAVERVLKMHEG-RPHAGDMVANGQIQMMVITSSGDSLDQIDGLKLRR 1131
            TSGT  FL   GI   ++ K+++G  P A D +   +I  ++I +    + + D   +R+
Sbjct: 1002 TSGTHKFLSDNGILSSKINKVYDGIFPTALDYIRENKIH-LIINTPLSRVTRDDSFTIRQ 1060

Query: 1132 RGLAYKVPVITTVSGALANAEAIRSLKSNTVTMTALQDF 1170
              + +KVP +TT + A A  + +  +K+   T+ +LQ+ 
Sbjct: 1061 AAIRFKVPCLTTSNAAKALIKGMVEMKNKGFTIHSLQEI 1099


>gi|451812013|ref|YP_007448467.1| carbamoyl-phosphate synthase large subunit [Candidatus
            Kinetoplastibacterium galatii TCC219]
 gi|451777915|gb|AGF48863.1| carbamoyl-phosphate synthase large subunit [Candidatus
            Kinetoplastibacterium galatii TCC219]
          Length = 1079

 Score = 1245 bits (3221), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 642/1093 (58%), Positives = 809/1093 (74%), Gaps = 28/1093 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTDL+ ILI+GAGPI+IGQACEFDYSG QACKALK EGY  IL+NSNPATIMTDP  AD
Sbjct: 3    KRTDLKSILIIGAGPIIIGQACEFDYSGAQACKALKSEGYRTILVNSNPATIMTDPETAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  + VE+++EKE+PDALLPTMGGQTALN A+ L   G LEK+ +ELIGA   A
Sbjct: 63   VTYIEPIIWQAVEKIIEKEKPDALLPTMGGQTALNCALDLVRHGVLEKHNIELIGANAHA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGE------FPLIIRPAFTLG 261
            I+KAEDR  FKQAM  IG+++  SG+ ++++E  S+   I        FP++IRP+FT+G
Sbjct: 123  IEKAEDRQKFKQAMTDIGLESARSGLAHSMEEAWSVQKGIAAYNDSFGFPVVIRPSFTMG 182

Query: 262  GTGGGIAYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIE 321
            G+GGGIAYN +EFE ICK GL AS TS++L+E+SLLGWKE+E+EV+RD ADN +I+CSIE
Sbjct: 183  GSGGGIAYNSDEFEDICKRGLEASPTSELLIEESLLGWKEFEMEVIRDKADNCIIVCSIE 242

Query: 322  NVDPMGVHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEV 381
            N+DPMGVHTGDSITVAPAQTLTDKEYQ +R  SIA++REIGV+ GGSNVQFAVNP +G +
Sbjct: 243  NLDPMGVHTGDSITVAPAQTLTDKEYQIMRSASIAVLREIGVDTGGSNVQFAVNPDNGRM 302

Query: 382  MVIEMNPRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKK-TPASFEPSIDYV 440
            +VIEMNPRVSRSSALASKATGFPIAK+AA L+VG++LD++ NDIT K TPASFEPSIDYV
Sbjct: 303  VVIEMNPRVSRSSALASKATGFPIAKVAALLAVGFTLDELKNDITGKLTPASFEPSIDYV 362

Query: 441  VTKIPRFAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVK 500
            VTKIPRFAFEKFP ++  LTTQMKSVGE MA+GRTFQESFQKALR LE G  G    N K
Sbjct: 363  VTKIPRFAFEKFPTADSRLTTQMKSVGEVMAIGRTFQESFQKALRGLEVGVDGL---NQK 419

Query: 501  ELDWDWEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQF 560
             LD   E L+  L  P P+R+  +  A  K   +DE++ L+ ID WFL+Q KE++D+E  
Sbjct: 420  TLDR--ETLQVELGAPGPERIWYVGDAFAKKFTIDEVYALTKIDVWFLSQIKEIVDIELA 477

Query: 561  LLTQSVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAE 620
            L  +++S++  D   E+KR GFSD ++AF   S+E EVR+ R S  + P YKRVDTCAAE
Sbjct: 478  LEKKTLSDIDHDTLLELKRHGFSDARLAFLLDSSELEVRKLRHSFNIRPVYKRVDTCAAE 537

Query: 621  FEANTPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYET 680
            F  NT YMYS+Y+ ECES P+ KKK++ILGGGPNRIGQGIEFDYCC H S +L+  GYET
Sbjct: 538  FPTNTAYMYSTYEEECESNPSNKKKIIILGGGPNRIGQGIEFDYCCVHASLALREHGYET 597

Query: 681  IMMNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQ 740
            IM+N NPETVSTDYDTSDRLYFEPLT+EDVL ++  E P G IVQ+GGQTPLKL+     
Sbjct: 598  IMINCNPETVSTDYDTSDRLYFEPLTLEDVLEIVYKENPVGTIVQYGGQTPLKLA----- 652

Query: 741  YLDEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALA 800
                 R   A+G   V I GTSP+SID AEDRERF  ++ ++ + QP    A++E +AL+
Sbjct: 653  -----RALEANG---VPIIGTSPESIDIAEDRERFQKLLAKIGLRQPSNRTARTEVEALS 704

Query: 801  IAKEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEID 860
            +A EIGYP+VVRPSYVLGGRAMEIV+  + L  Y+  AV+V  + PVL+D +L++A E+D
Sbjct: 705  LAAEIGYPLVVRPSYVLGGRAMEIVHEQKDLERYMREAVKVSNDSPVLLDSFLNNATEVD 764

Query: 861  VDALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNV 920
            VD LAD   +V +GG+MEHIEQAGVHSGDSAC IP  ++S+  +D I   T  +AK LNV
Sbjct: 765  VDCLADG-EDVFVGGVMEHIEQAGVHSGDSACSIPPYSLSTDIVDEIKRQTRLIAKSLNV 823

Query: 921  CGLMNCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTK 980
             GLMN Q+A+   GD+Y+LE NPRASRT+P+VSKA G  LAK AALVM+G SL      +
Sbjct: 824  KGLMNTQFAV-QDGDIYVLEVNPRASRTIPYVSKATGLQLAKVAALVMAGVSLTSQNVIE 882

Query: 981  EVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPL 1040
            EV   + SVKEAV PF KF G D +LGPEM+STGEVMGI  +F  AF KAQ+ AG +LP 
Sbjct: 883  EVKSSYFSVKEAVFPFVKFPGVDTILGPEMKSTGEVMGIGKTFAEAFVKAQLGAGVRLPE 942

Query: 1041 SGTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHA 1100
            +GTVF+S+ D  K     +AK    +GF +V+T GTA  L   G+ V  V K++EGRP+ 
Sbjct: 943  TGTVFISVKDQDKLLAIDVAKGLQSLGFHLVATKGTAARLMSAGVKVREVNKVNEGRPNI 1002

Query: 1101 GDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSN 1160
             DM+ NG+I +++ T        +D   +R + LA +V   TT++GA A  + ++ L++ 
Sbjct: 1003 VDMIRNGEIVLVINTVEERRNAIVDSKTIRVQSLANRVVCFTTIAGARAAVDGMQYLRNE 1062

Query: 1161 T-VTMTALQDFFD 1172
              + + +LQ+  D
Sbjct: 1063 EGLKVYSLQEIHD 1075


>gi|357405161|ref|YP_004917085.1| carbamoyl phosphate synthase large subunit [Methylomicrobium
            alcaliphilum 20Z]
 gi|351717826|emb|CCE23491.1| carbamoyl phosphate synthase, large subunit (Carbamoyl-phosphate
            synthetase ammonia chain) [Methylomicrobium alcaliphilum
            20Z]
          Length = 1075

 Score = 1244 bits (3220), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 622/1086 (57%), Positives = 806/1086 (74%), Gaps = 24/1086 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KR+D++ IL+LGAGPIVIGQACEFDYSGTQACKAL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRSDIKSILLLGAGPIVIGQACEFDYSGTQACKALREEGYRVILVNSNPATIMTDPDMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
              YI P+  + VE+++EKERPDA+LPTMGGQTALN A+AL + G LEKYGVE+IGA  +A
Sbjct: 63   VVYIEPIDWQTVEKIIEKERPDAILPTMGGQTALNCALALDKHGVLEKYGVEMIGATKEA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR+LF QAM+ IG++   S   +T++E ++   E+G +P IIRP+FT+GG+GGGI
Sbjct: 123  INKAEDRELFNQAMRKIGLEVAKSKTAHTMEEALAAQQEVG-YPTIIRPSFTMGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYNKEEF  IC+ GL  S T+++L+E+S+LGWKE+E+EV+RD  DN +I+CSIEN DPMG
Sbjct: 182  AYNKEEFIEICERGLYLSPTNELLIEESVLGWKEFEMEVVRDSKDNCIIVCSIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ LR+ S+A++REIGV+ GGSNVQ A+NP +G +++IEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQILRNVSLAVLREIGVDTGGSNVQVAINPENGRMVIIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ N+IT   TPASFEP+IDYVVTK+PR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGYTLDELQNEITGGATPASFEPTIDYVVTKVPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWD- 505
            F FEKFP ++  LTTQMKSVGE MA+GR+FQES QKALR LE   +G     + +L+ + 
Sbjct: 362  FTFEKFPQADDRLTTQMKSVGEVMAIGRSFQESLQKALRGLEVDKTGL--DEIVDLNAED 419

Query: 506  -WEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQ 564
              E L   +R P  +R+  +  A + GM ++EIH++  ID WFL Q ++L+  E+ L T+
Sbjct: 420  AKEILLKEMRHPGAERLWYVADAFRSGMSLEEIHDICKIDPWFLAQIEDLLIAEKSLSTK 479

Query: 565  SVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEAN 624
            +++ + + + Y +KR+GFSD ++A    ++E E+R  R    + P YKR+D+CAAEF ++
Sbjct: 480  TLATLEEGELYRLKRKGFSDARLAKLLDTSESEIRNARHKNNIRPVYKRIDSCAAEFSSD 539

Query: 625  TPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMN 684
            T Y+YSSYD ECE+  + K K++ILGGGPNRIGQGIEFDYCC H + +L+  GYETIM+N
Sbjct: 540  TAYLYSSYDEECEARVSDKDKIIILGGGPNRIGQGIEFDYCCVHAALALREDGYETIMIN 599

Query: 685  SNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDE 744
             NPETVSTD+DTSDRLYFE LT+EDVL +I LE+P+G+IVQ+GGQTPLKL+         
Sbjct: 600  CNPETVSTDFDTSDRLYFESLTLEDVLEIIHLEQPKGVIVQYGGQTPLKLA--------- 650

Query: 745  HRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKE 804
             R   A+G     I GTSPDSID AEDRERF  +++ L ++QP    A+S   A+  A+E
Sbjct: 651  -RALEAAG---APIIGTSPDSIDLAEDRERFQKLLERLGLKQPPNATARSVEQAILSARE 706

Query: 805  IGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDAL 864
            +GYP+VVRPSYVLGGRAMEIV  +E L  Y++ AV V  + PVL+D++L DA+E+DVDA+
Sbjct: 707  LGYPLVVRPSYVLGGRAMEIVVNEEGLQRYMKEAVSVSNDSPVLLDRFLDDAVEMDVDAI 766

Query: 865  ADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLM 924
             D    V+IGG+MEHIEQAGVHSGDSAC IP   + ++  + +     K+A+ L V GLM
Sbjct: 767  YDG-ERVLIGGLMEHIEQAGVHSGDSACSIPPYDLPAAIQNQLREQVAKMAEALGVKGLM 825

Query: 925  NCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIP 984
            N Q+AI    D+Y+LE NPRASRT PFVSKA G+PLAK AA  M GKSL + G TKE IP
Sbjct: 826  NTQFAI-QGDDIYVLEVNPRASRTAPFVSKATGYPLAKIAARCMVGKSLVEQGITKERIP 884

Query: 985  KHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTV 1044
             + SVKEAV PF KF G D LLGPEM+STGEVMG+  +F  AFAK+Q AAG  L  SG V
Sbjct: 885  SYYSVKEAVFPFVKFPGVDPLLGPEMKSTGEVMGVGKTFGEAFAKSQRAAGIDLSQSGKV 944

Query: 1045 FLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMV 1104
             +S+ D  K  L  +AK  +   ++IV+T GTA  L+  GI  + V K++EGRP+  DM+
Sbjct: 945  LISIRDADKAKLPELAKMLVAKDYQIVATRGTARVLKEAGIPCDEVFKVNEGRPNTVDMI 1004

Query: 1105 ANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTVTM 1164
             N QIQ++V T+ G      D   +RR  L ++V   TT++GA A   A+  L + TV  
Sbjct: 1005 KNDQIQLVVNTTDGKKAIH-DSFTMRREALQHRVTYYTTMAGARAACYALGELAAGTV-- 1061

Query: 1165 TALQDF 1170
            T+LQ+ 
Sbjct: 1062 TSLQEL 1067



 Score =  263 bits (672), Expect = 4e-67,   Method: Compositional matrix adjust.
 Identities = 171/457 (37%), Positives = 258/457 (56%), Gaps = 24/457 (5%)

Query: 58  RSRVRASSAKIDS-SAELSNGAA---SSKDQKLGKR-TDLRKILILGAGPIVIGQACEFD 112
           ++ +R    +IDS +AE S+  A   SS D++   R +D  KI+ILG GP  IGQ  EFD
Sbjct: 519 KNNIRPVYKRIDSCAAEFSSDTAYLYSSYDEECEARVSDKDKIIILGGGPNRIGQGIEFD 578

Query: 113 YSGTQACKALKEEGYEVILINSNPATIMTDPGLADRTYITPMTPELVEQVLEKERPDALL 172
           Y    A  AL+E+GYE I+IN NP T+ TD   +DR Y   +T E V +++  E+P  ++
Sbjct: 579 YCCVHAALALREDGYETIMINCNPETVSTDFDTSDRLYFESLTLEDVLEIIHLEQPKGVI 638

Query: 173 PTMGGQTALNLAVALAESGALEKYGVELIGAKLDAIKKAEDRDLFKQAMKTIGVKTPPSG 232
              GGQT L LA AL  +GA       +IG   D+I  AEDR+ F++ ++ +G+K PP+ 
Sbjct: 639 VQYGGQTPLKLARALEAAGA------PIIGTSPDSIDLAEDRERFQKLLERLGLKQPPNA 692

Query: 233 IGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGIAYNKEEFEAICKAGLAASLTSQVLV 292
              ++++ I  A E+G +PL++RP++ LGG    I  N+E  +   K  ++ S  S VL+
Sbjct: 693 TARSVEQAILSARELG-YPLVVRPSYVLGGRAMEIVVNEEGLQRYMKEAVSVSNDSPVLL 751

Query: 293 EKSLLGWKEYELEVMRDLADNVVIICSIENVDPMGVHTGDSITVAPAQTLTDKEYQRLRD 352
           ++ L    E +++ + D  + V+I   +E+++  GVH+GDS    P   L      +LR+
Sbjct: 752 DRFLDDAVEMDVDAIYD-GERVLIGGLMEHIEQAGVHSGDSACSIPPYDLPAAIQNQLRE 810

Query: 353 YSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMNPRVSRSSALASKATGFPIAKMAAKL 412
               +   +GV+ G  N QFA+   D  + V+E+NPR SR++   SKATG+P+AK+AA+ 
Sbjct: 811 QVAKMAEALGVK-GLMNTQFAIQGDD--IYVLEVNPRASRTAPFVSKATGYPLAKIAARC 867

Query: 413 SVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRFAFEKFPGSEPLLTTQMKSVGEAMAL 472
            VG SL  +   ITK+   S      Y   K   F F KFPG +PLL  +MKS GE M +
Sbjct: 868 MVGKSL--VEQGITKERIPS------YYSVKEAVFPFVKFPGVDPLLGPEMKSTGEVMGV 919

Query: 473 GRTFQESFQKALRSLECGFSGWGCSNVKELDWDWEQL 509
           G+TF E+F K+ R+     S  G   +   D D  +L
Sbjct: 920 GKTFGEAFAKSQRAAGIDLSQSGKVLISIRDADKAKL 956


>gi|338738961|ref|YP_004675923.1| carbamoyl phosphate synthase, large subunit [Hyphomicrobium sp. MC1]
 gi|337759524|emb|CCB65355.1| carbamoyl phosphate synthase, large subunit [Hyphomicrobium sp. MC1]
          Length = 1091

 Score = 1244 bits (3219), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 635/1105 (57%), Positives = 803/1105 (72%), Gaps = 41/1105 (3%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILI+GAGPIVIGQACEFDYSGTQACKAL++EGY +IL+NSNPATIMTDP LAD
Sbjct: 3    KRTDIKSILIIGAGPIVIGQACEFDYSGTQACKALRDEGYRIILVNSNPATIMTDPDLAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+TPE+V +++ KE+PDA+LPTMGGQTALN A+AL + G L +YGVELIGAK +A
Sbjct: 63   ATYIEPITPEVVAKIIAKEKPDAILPTMGGQTALNTALALHKQGILHRYGVELIGAKAEA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR LF++AM+ IG++TP S + +  DE  S    +G  P IIRP+FTLGGTGGGI
Sbjct: 123  IDKAEDRKLFREAMEEIGLETPRSRLVHNRDEAASAIEHVG-LPAIIRPSFTLGGTGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EE+  I   GL AS TSQVLVE+S++GWKEYE+EV+RD ADN +IICSIEN+DPMG
Sbjct: 182  AYNREEYFEIIDRGLDASPTSQVLVEESVIGWKEYEMEVVRDKADNCIIICSIENIDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPA TLTDKEYQ +RD SIA++REIGVE GGSNVQFAVNP DG ++VIEMN
Sbjct: 242  VHTGDSITVAPALTLTDKEYQIMRDASIAVLREIGVETGGSNVQFAVNPADGRLIVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD+I N+IT   TPASFEP+IDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGYTLDEIQNEITGGATPASFEPTIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDW-- 504
            FAFEKF G++  LTT MKSVGEAMA+GRTF ES QKALRS+E G +G+    ++ L    
Sbjct: 362  FAFEKFLGADTTLTTSMKSVGEAMAIGRTFAESMQKALRSMETGLTGFDDIQLEGLGQGD 421

Query: 505  DWEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQ 564
            D   ++ ++  P  DR+  +  A ++G  +DEIH+   ID WFL+Q K + D E  ++  
Sbjct: 422  DKNVVRAAVSRPTSDRILKVAQAFREGFSLDEIHQYCKIDPWFLSQIKAITDTEARIIAH 481

Query: 565  SVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEAN 624
             +   T      +K +GFSD ++A   K +E +VR+ R  LGV P +KR+DTCAAEF + 
Sbjct: 482  GLPK-TAPQLRALKAQGFSDARLAKLGKVSETDVRKLRKDLGVTPVFKRIDTCAAEFASP 540

Query: 625  TPYMYSSY------DFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGY 678
            T YMYS+Y      D  CE+ P+ K KV+ILGGGPNRIGQGIEFDYCCCH  F+L +A +
Sbjct: 541  TAYMYSTYETGLSGDPVCEADPSAKDKVVILGGGPNRIGQGIEFDYCCCHACFALTAADF 600

Query: 679  ETIMMNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERP----EGIIVQFGGQTPLKL 734
            ETIM+N NPETVSTDYDTSDRL+FEPLT EDVL +I +E      +G+IVQFGGQTPLKL
Sbjct: 601  ETIMVNCNPETVSTDYDTSDRLFFEPLTAEDVLEIIRVESRKGSLKGVIVQFGGQTPLKL 660

Query: 735  SLPIHQYLDEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKS 794
            +      L+E  +P         I GTSPD+ID AEDR+RF A+I +L+++QPK GIAK+
Sbjct: 661  A----SALEEAGVP---------ILGTSPDAIDLAEDRDRFKALIDKLNLKQPKSGIAKT 707

Query: 795  EADALAIAKEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLE---------NAVEVDPER 845
               A  IA+EIGYPVV+RPSYVLGGRAMEIV+    +  Y+          + + V  +R
Sbjct: 708  PEAARGIAEEIGYPVVIRPSYVLGGRAMEIVHDGAEVDRYVARLSATLDRPSELVVSDKR 767

Query: 846  PVLIDKYLSDAIEIDVDALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLD 905
            P+LID YL+DA+E+DVD L+D   +  + GIMEHIE+AG+HSGDSAC +P  ++S++ + 
Sbjct: 768  PLLIDSYLTDAVEVDVDCLSDG-KDTFVAGIMEHIEEAGIHSGDSACSLPPHSLSTTIVA 826

Query: 906  TISSWTIKLAKRLNVCGLMNCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAA 965
             +     +LA  L V GLMN Q+AI     V++LE NPRASRTVPFV+K IG P+A  AA
Sbjct: 827  ELERQARELALALRVVGLMNVQFAIKDE-QVFILEVNPRASRTVPFVAKVIGLPIASIAA 885

Query: 966  LVMSGKSLNDLGFTKEVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPI 1025
             VM+GK L D    K     H++VKEAV PF +F G D +LGPEMRSTGEVMGID  F +
Sbjct: 886  EVMAGKPLADFKLAKPTY-THIAVKEAVFPFARFLGVDPILGPEMRSTGEVMGIDHDFAM 944

Query: 1026 AFAKAQIAAGQKLPLSGTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGI 1085
            AF K+Q+ AGQKLP  GTVF+S+ +  K  +    +    +GFK+V+T GT  FLE  GI
Sbjct: 945  AFGKSQLGAGQKLPSKGTVFVSVKESDKSRVVAPVRELAAMGFKVVATRGTKRFLEANGI 1004

Query: 1086 AVERVLKMHEGRPHAGDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVS 1145
              + + K+ EGRPH  D + NG I ++  T+ G S    D   +RR  L + +P  TT++
Sbjct: 1005 QCDAINKVLEGRPHIVDAIKNGDINLVFNTTEG-SKALSDSKDIRRTALLHHIPYYTTLA 1063

Query: 1146 GALANAEAIRSLKSNTVTMTALQDF 1170
            GA+A   AI++L S+T+ +  LQ F
Sbjct: 1064 GAVAVTRAIKALASDTLDVAPLQAF 1088


>gi|359434169|ref|ZP_09224452.1| carbamoyl-phosphate synthase large subunit [Pseudoalteromonas sp.
            BSi20652]
 gi|357919155|dbj|GAA60701.1| carbamoyl-phosphate synthase large subunit [Pseudoalteromonas sp.
            BSi20652]
          Length = 1072

 Score = 1244 bits (3219), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 621/1077 (57%), Positives = 790/1077 (73%), Gaps = 18/1077 (1%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILILGAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPDMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  E+VE+++EKE+PDA+LPTMGGQTALN A+ L + G L K+GVELIGA  DA
Sbjct: 63   ATYIEPIHWEVVEKIIEKEKPDAVLPTMGGQTALNCALDLDKHGVLAKHGVELIGATADA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAE+R+ F  AMK IG++ P + I +++DE   I   IG  P IIRP+FT+GGTGGG+
Sbjct: 123  IDKAENRERFDVAMKNIGLECPRAEIAHSMDEAKDIITRIG-LPCIIRPSFTMGGTGGGV 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN EEFE IC+ GL  S T+++L+++SL+GWKEYE EV+RD  DN +I+C+IEN DPMG
Sbjct: 182  AYNLEEFEEICERGLDLSPTNELLIDESLIGWKEYETEVVRDKNDNCIIVCTIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGVE GGSNVQF +NP DG +++IEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQIMRNASMAVLREIGVETGGSNVQFGINPEDGRMVIIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT  KTPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKIAAKLAVGYTLDELQNDITGGKTPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            F FEKF G+   LTTQMKSVGE MA+GR  QES QKALR LE G +G+      +     
Sbjct: 362  FNFEKFAGANDRLTTQMKSVGEVMAIGRNQQESLQKALRGLEVGATGFNPIVALDDPKAK 421

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
            E++   LR P  +R+  I  AM+ GM VD+++EL+ +++WFL Q ++++  E  +    +
Sbjct: 422  EKIIRELREPGAERIWYIADAMRHGMSVDDVYELTKVNRWFLVQIEDILKDEAKIGEVGM 481

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
            + +  D   ++KR+GF+D +IA     +E E+R+KR  L ++P YKRVDTCAAEF ++T 
Sbjct: 482  AGLNADFLRKLKRKGFADPRIAEIAGVSEAEIRKKRHLLNIVPVYKRVDTCAAEFSSDTA 541

Query: 627  YMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSN 686
            YMYS+YD ECE+ PT + K++++GGGPNRIGQGIEFDYCC H S +L+  G+ETIM+N N
Sbjct: 542  YMYSTYDEECEANPTDRDKIMVIGGGPNRIGQGIEFDYCCVHASLALREDGFETIMVNCN 601

Query: 687  PETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHR 746
            PETVSTDYDTSDRLYFEP+T+EDVL ++ +E+P+G+IVQ+GGQTPLKL+          R
Sbjct: 602  PETVSTDYDTSDRLYFEPITLEDVLEIVRVEKPKGVIVQYGGQTPLKLA----------R 651

Query: 747  LPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEIG 806
               A+G   V + GTSPD+ID AEDRERF  +++ L++ QP+     S  +AL  + EIG
Sbjct: 652  ELEANG---VPVIGTSPDAIDRAEDRERFQQLVERLNLLQPENATVTSTEEALLKSVEIG 708

Query: 807  YPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALAD 866
            +P+VVRPSYVLGGRAMEIVY ++ L  Y+  AV+   E PVL+D++L +AIE+DVDA+ D
Sbjct: 709  FPLVVRPSYVLGGRAMEIVYDEDDLRRYMTEAVQASNEAPVLLDRFLDNAIEVDVDAICD 768

Query: 867  SCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNC 926
                V+IGGIMEHIEQAGVHSGDSAC +P  ++S    D +      +A  L V GLMN 
Sbjct: 769  G-EQVIIGGIMEHIEQAGVHSGDSACSLPAHSLSQEVQDVMRKQVTDMALELGVVGLMNT 827

Query: 927  QYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPKH 986
            Q+A+   G VYL+E NPRA+RTVPFVSKA G  LAK AA  M+G+SL   G TKEVIP +
Sbjct: 828  QFAV-KDGKVYLIEVNPRAARTVPFVSKATGVALAKVAARCMAGQSLASQGITKEVIPPY 886

Query: 987  VSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVFL 1046
             SVKE VLPF KFQG D + GPEMRSTGEVMGI  +F  AFAKAQ+ A   LP  G   L
Sbjct: 887  YSVKEVVLPFAKFQGVDPIRGPEMRSTGEVMGIGDTFAEAFAKAQLGASNTLPRGGRALL 946

Query: 1047 SLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVAN 1106
            S+ +  KP +  +AK   D+GF++ +T GTA  LE  GI V RV K++EGRPH  D + N
Sbjct: 947  SVRNSDKPRIVELAKIMTDLGFELDATGGTAQALEEAGIEVRRVNKVYEGRPHILDYIKN 1006

Query: 1107 GQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTVT 1163
             +   +V T+ G    + D   LRR  L  K    TT++ A AN  A ++   + VT
Sbjct: 1007 KEYSYIVNTTEGRQAIE-DSKVLRRGALQNKTNYTTTLNAAFANCTANKADDRSKVT 1062


>gi|392533582|ref|ZP_10280719.1| carbamoyl phosphate synthase large subunit [Pseudoalteromonas arctica
            A 37-1-2]
          Length = 1072

 Score = 1244 bits (3219), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 620/1077 (57%), Positives = 789/1077 (73%), Gaps = 18/1077 (1%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILILGAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPDMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  E+VE+++EKE+PDA+LPTMGGQTALN A+ L + G L K+GVELIGA  DA
Sbjct: 63   ATYIEPIHWEVVEKIIEKEKPDAVLPTMGGQTALNCALELDKHGVLAKHGVELIGATADA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAE+R+ F  AMK IG++ P + I +++DE   I   IG  P IIRP+FT+GGTGGG+
Sbjct: 123  IDKAENRERFDVAMKNIGLECPRAEIAHSMDEAKDIITRIG-LPCIIRPSFTMGGTGGGV 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN EEFE IC+ GL  S T+++L+++SL+GWKEYE EV+RD  DN +I+C+IEN DPMG
Sbjct: 182  AYNLEEFEEICERGLDLSPTNELLIDESLIGWKEYETEVVRDKNDNCIIVCTIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGVE GGSNVQF +NP DG +++IEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQIMRNASMAVLREIGVETGGSNVQFGINPEDGRMVIIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITK-KTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT  KTPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKIAAKLAVGYTLDELQNDITGGKTPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            F FEKF G+   LTTQMKSVGE MA+GR  QES QKALR LE G +G+      +     
Sbjct: 362  FNFEKFAGANDRLTTQMKSVGEVMAIGRNQQESLQKALRGLEVGATGFNPIVALDDPKAK 421

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
            E++   LR P  +R+  I  AM+ GM VD+++EL+ +++WFL Q ++++  E  +    +
Sbjct: 422  EKIIRELREPGAERIWYIADAMRHGMSVDDVYELTKVNRWFLVQIEDILKDEAKIAKVGM 481

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
            + +  D   ++KR+GF+D +IA     +E E+R+KR  L ++P YKRVDTCAAEF ++T 
Sbjct: 482  AGLNADFLRKLKRKGFADPRIAEIAGVSEAEIRKKRHLLNIVPVYKRVDTCAAEFSSDTA 541

Query: 627  YMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSN 686
            YMYS+YD ECE+ PT + K++++GGGPNRIGQGIEFDYCC H S +L+  GYETIM+N N
Sbjct: 542  YMYSTYDEECEANPTDRDKIMVIGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVNCN 601

Query: 687  PETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHR 746
            PETVSTDYDTSDRLYFEP+T+EDVL ++ +E+P+G+IVQ+GGQTPLKL+          R
Sbjct: 602  PETVSTDYDTSDRLYFEPITLEDVLEIVRVEKPKGVIVQYGGQTPLKLA----------R 651

Query: 747  LPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEIG 806
               A+G   V + GTSPD+ID AEDRERF  +++ L++ QP+     S  +AL  + EIG
Sbjct: 652  ELEANG---VPVIGTSPDAIDRAEDRERFQQLVERLNLLQPENATVTSTEEALLKSVEIG 708

Query: 807  YPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALAD 866
            +P+VVRPSYVLGGRAMEIVY ++ L  Y+  AV+   E PVL+D++L +AIE+DVDA+ D
Sbjct: 709  FPLVVRPSYVLGGRAMEIVYDEDDLRRYMTEAVQASNEAPVLLDRFLDNAIEVDVDAICD 768

Query: 867  SCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNC 926
                V+IGGIMEHIEQAGVHSGDSAC +P  ++S    D +      +A  L V GLMN 
Sbjct: 769  G-EQVIIGGIMEHIEQAGVHSGDSACSLPAHSLSQEVQDVMRKQVTDMALELGVVGLMNT 827

Query: 927  QYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPKH 986
            Q+A+     VYL+E NPRA+RTVPFVSKA G  LAK AA  M+G+SL   G TKEVIP +
Sbjct: 828  QFAVKED-KVYLIEVNPRAARTVPFVSKATGVALAKVAARCMAGQSLASQGITKEVIPPY 886

Query: 987  VSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVFL 1046
             SVKE VLPF KFQG D + GPEMRSTGEVMG+  +F  AFAKAQ+ A   LP  G   L
Sbjct: 887  YSVKEVVLPFAKFQGVDPIRGPEMRSTGEVMGVGDTFAEAFAKAQLGASNTLPRGGRALL 946

Query: 1047 SLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVAN 1106
            S+ +  KP +  +AK   D+GF++ +T GTA  LE  GI V RV K++EGRPH  D + N
Sbjct: 947  SVRNSDKPRIVELAKIMTDLGFELDATGGTAQALEEAGIEVRRVNKVYEGRPHILDYIKN 1006

Query: 1107 GQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTVT 1163
             +   +V T+ G    + D   LRR  L  K    TT++ A AN  A ++   + VT
Sbjct: 1007 KEYSYIVNTTEGRQAIE-DSKVLRRGALQNKTNYTTTLNAAFANCTANKADDRSKVT 1062


>gi|421129087|ref|ZP_15589297.1| carbamoyl-phosphate synthase, large subunit [Leptospira kirschneri
            str. 2008720114]
 gi|410359791|gb|EKP06850.1| carbamoyl-phosphate synthase, large subunit [Leptospira kirschneri
            str. 2008720114]
          Length = 1106

 Score = 1244 bits (3219), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 635/1119 (56%), Positives = 806/1119 (72%), Gaps = 58/1119 (5%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            +R ++R +LILG+GPIVIGQACEFDYSGTQA KALKE+G  VIL+NSNPATIMTDP LAD
Sbjct: 3    RRENIRSVLILGSGPIVIGQACEFDYSGTQAAKALKEKGIRVILLNSNPATIMTDPDLAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TY+ PMT  +V+++LEKE+PDA+LPT+GGQTALNLA+A   +G LEKY VELIGAK+DA
Sbjct: 63   ATYVEPMTVPVVQKILEKEKPDAILPTVGGQTALNLALACNSAGILEKYNVELIGAKVDA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            IKKAEDR+LFK+AM+ IGV+ P SG+ N L +   I N++G  PLI+RPAFTLGGTGGGI
Sbjct: 123  IKKAEDRELFKKAMEKIGVRVPASGLANNLKDAFEIKNKLG-LPLIVRPAFTLGGTGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AY +E FE +   GL AS  SQVL+E+S+LGWKE+ELEVMRDLADNVVIICSIEN+DPMG
Sbjct: 182  AYTEETFEEVVSKGLKASPISQVLLEESVLGWKEFELEVMRDLADNVVIICSIENIDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAP QTL+DKEYQ LRD SI+IIREIGVE GGSN+QFAVNP +G+V+VIEMN
Sbjct: 242  VHTGDSITVAPQQTLSDKEYQNLRDMSISIIREIGVETGGSNIQFAVNPTNGDVIVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRF 447
            PRVSRSSALASKATGFPIAK+AA LS+GY+LD+I NDIT+ TPASFEPSIDYVVTK+PRF
Sbjct: 302  PRVSRSSALASKATGFPIAKIAALLSIGYTLDEIKNDITRVTPASFEPSIDYVVTKVPRF 361

Query: 448  AFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSN-VKEL---- 502
            AFEKFPG++  L  QMK+VGEAMA+GRTF+ESFQKALRSLE    G+G     +EL    
Sbjct: 362  AFEKFPGTDDTLGVQMKAVGEAMAIGRTFKESFQKALRSLEIDRYGFGSDGYFQELLYSR 421

Query: 503  ----DWDWEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVE 558
                D   E +   L+ PN  R+  +  A  +   VD+IH+L  +D+WFL Q ++L+ +E
Sbjct: 422  SLNNDQRKEWIDSHLKRPNDKRIFYVKLAFDEDYTVDQIHDLCKMDRWFLWQMEDLLKLE 481

Query: 559  QFLLTQSVSNMTKDDFYEVKRRGFSDKQIAFAT--------------------------K 592
            +    +  S ++K     +KR GFS++Q++F                            K
Sbjct: 482  REYSEKENSILSK-----MKRAGFSNRQLSFLKNKKQILDLLDGNLRVDLKKTEIQNLLK 536

Query: 593  STEKEVREKRLSLGVIPSYKRVDTCAAEFEANTPYMYSSYDFECESAPTQKKKVLILGGG 652
             TE E+  +  +  ++P YKR+DTCA EFEA TPY YSSYD E ES  T  K V+ILGGG
Sbjct: 537  KTEDEIEAELGAKKILPVYKRIDTCAGEFEAYTPYFYSSYDDEDESDVTNAKSVMILGGG 596

Query: 653  PNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSNPETVSTDYDTSDRLYFEPLTVEDVLN 712
            PNRIGQGIEFDYCCC  S++LQ  G E+IM+NSNPETVSTDYDTSDRLYFEPLT+EDV  
Sbjct: 597  PNRIGQGIEFDYCCCQASYALQDLGIESIMINSNPETVSTDYDTSDRLYFEPLTLEDVYR 656

Query: 713  VIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHRLPSASGDGLVRIWGTSPDSIDAAEDR 772
            +   E+PEG+I+QFGGQTPLKL+  + +           G   V+I GTSPDSID AEDR
Sbjct: 657  IYQNEKPEGVIIQFGGQTPLKLAKDLEK----------KG---VKILGTSPDSIDRAEDR 703

Query: 773  ERFNAIIKELSIEQPKGGIAKSEADALAIAKEIGYPVVVRPSYVLGGRAMEIVYTDETLV 832
            +RF  ++++L +  P+ GIA S  +A  IA +IGYPV+VRPSYVLGGRAM I+  ++ L 
Sbjct: 704  KRFIEVLEKLKLNSPESGIATSMEEAREIAHKIGYPVLVRPSYVLGGRAMLIINEEKELD 763

Query: 833  TYLENAVEVDPERPVLIDKYLSDAIEIDVDALADSCGNVVIGGIMEHIEQAGVHSGDSAC 892
             Y+E A E+  +RP+LID +L DA+E+DVDAL D    V + GIMEHIE+AGVHSGDSAC
Sbjct: 764  RYMEKAEEISKDRPLLIDSFLEDAVEVDVDALCDG-EEVFVTGIMEHIEEAGVHSGDSAC 822

Query: 893  MIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNCQYAITTSGDVYLLEANPRASRTVPFV 952
            ++P +T+S + +D I   T+ LA  L V GL+N QYA+     +Y++E NPRASRTVPFV
Sbjct: 823  VLPPQTLSKNMMDEIRKATVNLALELQVKGLINIQYAVKNE-ILYIIEVNPRASRTVPFV 881

Query: 953  SKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRS 1012
            SKA+GHP+ KYA  +M G+SL +L   KE+    VSVKE VLPF KF G D +LGPEMRS
Sbjct: 882  SKALGHPIVKYATRIMMGESLKNLPLPKEMAFSQVSVKEVVLPFNKFPGVDTILGPEMRS 941

Query: 1013 TGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVFLSLNDLTKPHLERIAKAFLDIGFKIVS 1072
            TGEVMGI  +   AF K+Q  AG +LP  GTVF+S+ND TK  L    K   ++GF +++
Sbjct: 942  TGEVMGIASTAGEAFLKSQYMAGDELPSQGTVFVSINDKTKAELLSYIKDLSELGFNLIA 1001

Query: 1073 TSGTAHFLELKGIAVERVLKMHEGR-PHAGDMVANGQIQMMVITSSGDSLDQIDGLKLRR 1131
            TSGT  FL   GI   ++ K+++G  P A D +   +I  ++I +    + + D   +R+
Sbjct: 1002 TSGTHKFLSDNGILSSKINKVYDGVFPTALDYIRENKIH-LIINTPLSRVTRDDSFTIRQ 1060

Query: 1132 RGLAYKVPVITTVSGALANAEAIRSLKSNTVTMTALQDF 1170
              + +KVP +TT + A A  + +  +K+   T+ +LQ+ 
Sbjct: 1061 AAIRFKVPCLTTSNAAKALIKGMVEMKNKGFTIHSLQEI 1099



 Score =  231 bits (589), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 142/406 (34%), Positives = 228/406 (56%), Gaps = 21/406 (5%)

Query: 79  ASSKDQKLGKRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPAT 138
           +S  D+     T+ + ++ILG GP  IGQ  EFDY   QA  AL++ G E I+INSNP T
Sbjct: 574 SSYDDEDESDVTNAKSVMILGGGPNRIGQGIEFDYCCCQASYALQDLGIESIMINSNPET 633

Query: 139 IMTDPGLADRTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGV 198
           + TD   +DR Y  P+T E V ++ + E+P+ ++   GGQT L LA        LEK GV
Sbjct: 634 VSTDYDTSDRLYFEPLTLEDVYRIYQNEKPEGVIIQFGGQTPLKLA------KDLEKKGV 687

Query: 199 ELIGAKLDAIKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAF 258
           +++G   D+I +AEDR  F + ++ + + +P SGI  +++E   IA++IG +P+++RP++
Sbjct: 688 KILGTSPDSIDRAEDRKRFIEVLEKLKLNSPESGIATSMEEAREIAHKIG-YPVLVRPSY 746

Query: 259 TLGGTGGGIAYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIIC 318
            LGG    I   ++E +   +     S    +L++  L    E +++ + D  + V +  
Sbjct: 747 VLGGRAMLIINEEKELDRYMEKAEEISKDRPLLIDSFLEDAVEVDVDALCD-GEEVFVTG 805

Query: 319 SIENVDPMGVHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVD 378
            +E+++  GVH+GDS  V P QTL+      +R  ++ +  E+ V+ G  N+Q+AV    
Sbjct: 806 IMEHIEEAGVHSGDSACVLPPQTLSKNMMDEIRKATVNLALELQVK-GLINIQYAVK--- 861

Query: 379 GEVM-VIEMNPRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSI 437
            E++ +IE+NPR SR+    SKA G PI K A ++ +G SL  +P     K  A  + S+
Sbjct: 862 NEILYIIEVNPRASRTVPFVSKALGHPIVKYATRIMMGESLKNLP---LPKEMAFSQVSV 918

Query: 438 DYVVTKIPRFAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKA 483
             VV       F KFPG + +L  +M+S GE M +  T  E+F K+
Sbjct: 919 KEVV-----LPFNKFPGVDTILGPEMRSTGEVMGIASTAGEAFLKS 959


>gi|121604677|ref|YP_982006.1| carbamoyl-phosphate synthase large subunit [Polaromonas
            naphthalenivorans CJ2]
 gi|120593646|gb|ABM37085.1| carbamoyl-phosphate synthase large subunit [Polaromonas
            naphthalenivorans CJ2]
          Length = 1080

 Score = 1244 bits (3218), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 639/1082 (59%), Positives = 800/1082 (73%), Gaps = 26/1082 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ +LI+GAGPI+IGQACEFDYSG QACKAL+EEGY+VILINSNPATIMTDP  AD
Sbjct: 3    KRTDIKSVLIIGAGPIIIGQACEFDYSGVQACKALREEGYKVILINSNPATIMTDPATAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+T + VE+++ KERPDA+LPTMGGQTALN A+ L   G LEKY VELIGAK +A
Sbjct: 63   VTYIEPITWQTVEKIIAKERPDAILPTMGGQTALNCALDLWRHGVLEKYSVELIGAKPEA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  FK AM  IG+ +  SGI +T+DE  S+   +G FP +IRP+FTLGGTGGGI
Sbjct: 123  IDKAEDRLKFKDAMTKIGLGSARSGIAHTMDEAWSVQKTLG-FPTVIRPSFTLGGTGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN EEFE ICK GL AS TS++L+E+SLLGWKEYE+EV+RD ADN +I+CSIEN+DPMG
Sbjct: 182  AYNPEEFEEICKRGLEASPTSELLIEESLLGWKEYEMEVVRDTADNCIIVCSIENLDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTL+DKEYQ LR+ S+A++REIGV+ GGSNVQF++NPVDG ++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLSDKEYQILRNASLAVLREIGVDTGGSNVQFSINPVDGRMVVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ N+IT   TPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGYTLDELRNEITGGATPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            FAFEKFP ++  LTTQMKSVGE MA+GRTFQESFQKALR LE G  G     + E   D 
Sbjct: 362  FAFEKFPTADSRLTTQMKSVGEVMAMGRTFQESFQKALRGLEVGVDG-----MNEKTQDR 416

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
            E L+  L  P PDR+  +  A   G+ VDE+  L+ ID+WFL Q ++++ +E  L T S+
Sbjct: 417  EVLEKELGAPGPDRIWYVGDAFAMGLSVDEVFALTKIDRWFLVQIEQIVKIELELETTSL 476

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
              +       +K++GFSD+++A   K+T+  +REKR++LGV P YKRVDTCAAEFE NT 
Sbjct: 477  DKIDAATLRALKQKGFSDRRLARQFKTTDTAIREKRIALGVRPVYKRVDTCAAEFETNTA 536

Query: 627  YMYSSYDF---ECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMM 683
            Y+YS+Y+    ECE+APT KKK+++LGGGPNRIGQGIEFDYCC H + +++  GYETIM+
Sbjct: 537  YLYSTYEAEGSECEAAPTDKKKIMVLGGGPNRIGQGIEFDYCCVHAAMAMREDGYETIMV 596

Query: 684  NSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLD 743
            N NPETVSTDYDTSDRLYFEPLT+EDVL ++D E+P G+IVQ+GGQTPLKL+L +     
Sbjct: 597  NCNPETVSTDYDTSDRLYFEPLTLEDVLEIVDKEKPFGVIVQYGGQTPLKLALDLE---- 652

Query: 744  EHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAK 803
                  A+G   V I GTSPD IDAAEDRERF  ++  L + QP    A++E +AL  A 
Sbjct: 653  ------ANG---VPIIGTSPDMIDAAEDRERFQKLLHALELRQPPNATARTEPEALEKAA 703

Query: 804  EIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDA 863
             +GYP+VVRPSYVLGGRAMEIV+    L  Y+  AV+V  + PVL+D++L+DAIE DVD 
Sbjct: 704  ALGYPLVVRPSYVLGGRAMEIVHEQRDLERYMREAVKVSHDSPVLLDRFLNDAIECDVDC 763

Query: 864  LADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGL 923
            + D+ G   IGG+MEHIEQAGVHSGDSAC +P  ++S++ +  I   T  +A+ LNV GL
Sbjct: 764  IRDAEGKTFIGGVMEHIEQAGVHSGDSACSLPPYSLSAATVTEIKRQTAAMAEALNVVGL 823

Query: 924  MNCQYAITTSGD---VYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTK 980
            MN Q+AI        +Y+LE NPRASRTVPFVSKA G  LAK AA  M G+SL   G   
Sbjct: 824  MNVQFAIQNIDGLDVIYVLEVNPRASRTVPFVSKATGIQLAKVAARCMVGQSLASQGVVN 883

Query: 981  EVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPL 1040
            EV P + SVKEAV PF KF G D +LGPEM+STGEVMG+  +F  AF K+QI AG +LP 
Sbjct: 884  EVTPPYFSVKEAVFPFVKFPGVDTILGPEMKSTGEVMGVGKTFGEAFVKSQIGAGTRLPT 943

Query: 1041 SGTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHA 1100
            SG VFL++ +  K     +A+A  ++ F++V+T GTA  +   GIA   V K+ EGRPH 
Sbjct: 944  SGKVFLTVKNNDKARAVEVARALAELKFELVATKGTAAAINAAGIACGVVNKVTEGRPHV 1003

Query: 1101 GDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSN 1160
             DM+ N  I +++ T         D  ++R   L  +V   TT++GA A  E ++ L + 
Sbjct: 1004 VDMIKNNGIALVINTVEERRNAIADSRQIRTSALLARVTTFTTIAGAEAAVEGMKYLDNL 1063

Query: 1161 TV 1162
            +V
Sbjct: 1064 SV 1065


>gi|418676186|ref|ZP_13237470.1| carbamoyl-phosphate synthase, large subunit [Leptospira kirschneri
            serovar Grippotyphosa str. RM52]
 gi|418684861|ref|ZP_13246044.1| carbamoyl-phosphate synthase, large subunit [Leptospira kirschneri
            serovar Grippotyphosa str. Moskva]
 gi|418742493|ref|ZP_13298864.1| carbamoyl-phosphate synthase, large subunit [Leptospira kirschneri
            serovar Valbuzzi str. 200702274]
 gi|400323332|gb|EJO71182.1| carbamoyl-phosphate synthase, large subunit [Leptospira kirschneri
            serovar Grippotyphosa str. RM52]
 gi|410740609|gb|EKQ85324.1| carbamoyl-phosphate synthase, large subunit [Leptospira kirschneri
            serovar Grippotyphosa str. Moskva]
 gi|410750151|gb|EKR07133.1| carbamoyl-phosphate synthase, large subunit [Leptospira kirschneri
            serovar Valbuzzi str. 200702274]
          Length = 1106

 Score = 1244 bits (3218), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 635/1119 (56%), Positives = 806/1119 (72%), Gaps = 58/1119 (5%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            +R ++R +LILG+GPIVIGQACEFDYSGTQA KALKE+G  VIL+NSNPATIMTDP LAD
Sbjct: 3    RRENIRSVLILGSGPIVIGQACEFDYSGTQAAKALKEKGIRVILLNSNPATIMTDPDLAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TY+ PMT  +V+++LEKE+PDA+LPT+GGQTALNLA+A   +G LEKY VELIGAK+DA
Sbjct: 63   ATYVEPMTVPVVQKILEKEKPDAILPTVGGQTALNLALACNSAGILEKYNVELIGAKVDA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            IKKAEDR+LFK+AM+ IGV+ P SG+ N L +   I N++G  PLI+RPAFTLGGTGGGI
Sbjct: 123  IKKAEDRELFKKAMEKIGVRVPASGLANNLKDAFEIKNKLG-LPLIVRPAFTLGGTGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AY +E FE +   GL AS  SQVL+E+S+LGWKE+ELEVMRDLADNVVIICSIEN+DPMG
Sbjct: 182  AYTEETFEEVVSKGLKASPISQVLLEESVLGWKEFELEVMRDLADNVVIICSIENIDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAP QTL+DKEYQ LRD SI+IIREIGVE GGSN+QFAVNP +G+V+VIEMN
Sbjct: 242  VHTGDSITVAPQQTLSDKEYQNLRDMSISIIREIGVETGGSNIQFAVNPANGDVIVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRF 447
            PRVSRSSALASKATGFPIAK+AA LS+GY+LD+I NDIT+ TPASFEPSIDYVVTK+PRF
Sbjct: 302  PRVSRSSALASKATGFPIAKIAALLSIGYTLDEIKNDITRVTPASFEPSIDYVVTKVPRF 361

Query: 448  AFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSN-VKEL---- 502
            AFEKFPG++  L  QMK+VGEAMA+GRTF+ESFQKALRSLE    G+G     +EL    
Sbjct: 362  AFEKFPGTDDTLGVQMKAVGEAMAIGRTFKESFQKALRSLEIDRYGFGSDGYFQELLYSR 421

Query: 503  ----DWDWEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVE 558
                D   E +   L+ PN  R+  +  A  +   VD+IH+L  +D+WFL Q ++L+ +E
Sbjct: 422  SLNNDQRKEWIDSHLKRPNDKRIFYVKLAFDEDYTVDQIHDLCKMDRWFLWQMEDLLKLE 481

Query: 559  QFLLTQSVSNMTKDDFYEVKRRGFSDKQIAFAT--------------------------K 592
            +    +  S ++K     +KR GFS++Q++F                            K
Sbjct: 482  REYSEKGNSILSK-----MKRAGFSNRQLSFLKNKKQILDLLDGNLRVDLKKTEIQNLLK 536

Query: 593  STEKEVREKRLSLGVIPSYKRVDTCAAEFEANTPYMYSSYDFECESAPTQKKKVLILGGG 652
             TE E+  +  +  ++P YKR+DTCA EFEA TPY YSSYD E ES  T  K V+ILGGG
Sbjct: 537  KTEDEIEAELGAKKILPVYKRIDTCAGEFEAYTPYFYSSYDDEDESDVTNAKSVMILGGG 596

Query: 653  PNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSNPETVSTDYDTSDRLYFEPLTVEDVLN 712
            PNRIGQGIEFDYCCC  S++LQ  G E+IM+NSNPETVSTDYDTSDRLYFEPLT+EDV  
Sbjct: 597  PNRIGQGIEFDYCCCQASYALQDLGIESIMINSNPETVSTDYDTSDRLYFEPLTLEDVYR 656

Query: 713  VIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHRLPSASGDGLVRIWGTSPDSIDAAEDR 772
            +   E+PEG+I+QFGGQTPLKL+  + +           G   V+I GTSPDSID AEDR
Sbjct: 657  IYQNEKPEGVIIQFGGQTPLKLAKDLEK----------KG---VKILGTSPDSIDRAEDR 703

Query: 773  ERFNAIIKELSIEQPKGGIAKSEADALAIAKEIGYPVVVRPSYVLGGRAMEIVYTDETLV 832
            +RF  ++++L +  P+ GIA S  +A  IA +IGYPV+VRPSYVLGGRAM I+  ++ L 
Sbjct: 704  KRFIEVLEKLKLNSPESGIATSMEEAREIAHKIGYPVLVRPSYVLGGRAMLIINEEKELD 763

Query: 833  TYLENAVEVDPERPVLIDKYLSDAIEIDVDALADSCGNVVIGGIMEHIEQAGVHSGDSAC 892
             Y+E A E+  +RP+LID +L DA+E+DVDAL D    V + GIMEHIE+AGVHSGDSAC
Sbjct: 764  RYMEKAEEISKDRPLLIDSFLEDAVEVDVDALCDG-EEVFVTGIMEHIEEAGVHSGDSAC 822

Query: 893  MIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNCQYAITTSGDVYLLEANPRASRTVPFV 952
            ++P +T+S + +D I   T+ LA  L V GL+N QYA+     +Y++E NPRASRTVPFV
Sbjct: 823  VLPPQTLSKNMMDEIRKATVNLALELQVKGLINIQYAVKNE-ILYIIEVNPRASRTVPFV 881

Query: 953  SKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRS 1012
            SKA+GHP+ KYA  +M G+SL +L   KE+    VSVKE VLPF KF G D +LGPEMRS
Sbjct: 882  SKALGHPIVKYATRIMMGESLKNLPLPKEMAFSQVSVKEVVLPFNKFPGVDTILGPEMRS 941

Query: 1013 TGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVFLSLNDLTKPHLERIAKAFLDIGFKIVS 1072
            TGEVMGI  +   AF K+Q  AG +LP  GTVF+S+ND TK  L    K   ++GF +++
Sbjct: 942  TGEVMGIASTAGEAFLKSQYMAGDELPSQGTVFVSINDKTKAELLSYIKDLSELGFNLIA 1001

Query: 1073 TSGTAHFLELKGIAVERVLKMHEGR-PHAGDMVANGQIQMMVITSSGDSLDQIDGLKLRR 1131
            TSGT  FL   GI   ++ K+++G  P A D +   +I  ++I +    + + D   +R+
Sbjct: 1002 TSGTHKFLSDNGILSSKINKVYDGVFPTALDYIRENKIH-LIINTPLSRVTRDDSFTIRQ 1060

Query: 1132 RGLAYKVPVITTVSGALANAEAIRSLKSNTVTMTALQDF 1170
              + +KVP +TT + A A  + +  +K+   T+ +LQ+ 
Sbjct: 1061 AAIRFKVPCLTTSNAAKALIKGMVEMKNKGFTIHSLQEI 1099



 Score =  231 bits (589), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 142/406 (34%), Positives = 228/406 (56%), Gaps = 21/406 (5%)

Query: 79  ASSKDQKLGKRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPAT 138
           +S  D+     T+ + ++ILG GP  IGQ  EFDY   QA  AL++ G E I+INSNP T
Sbjct: 574 SSYDDEDESDVTNAKSVMILGGGPNRIGQGIEFDYCCCQASYALQDLGIESIMINSNPET 633

Query: 139 IMTDPGLADRTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGV 198
           + TD   +DR Y  P+T E V ++ + E+P+ ++   GGQT L LA        LEK GV
Sbjct: 634 VSTDYDTSDRLYFEPLTLEDVYRIYQNEKPEGVIIQFGGQTPLKLA------KDLEKKGV 687

Query: 199 ELIGAKLDAIKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAF 258
           +++G   D+I +AEDR  F + ++ + + +P SGI  +++E   IA++IG +P+++RP++
Sbjct: 688 KILGTSPDSIDRAEDRKRFIEVLEKLKLNSPESGIATSMEEAREIAHKIG-YPVLVRPSY 746

Query: 259 TLGGTGGGIAYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIIC 318
            LGG    I   ++E +   +     S    +L++  L    E +++ + D  + V +  
Sbjct: 747 VLGGRAMLIINEEKELDRYMEKAEEISKDRPLLIDSFLEDAVEVDVDALCD-GEEVFVTG 805

Query: 319 SIENVDPMGVHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVD 378
            +E+++  GVH+GDS  V P QTL+      +R  ++ +  E+ V+ G  N+Q+AV    
Sbjct: 806 IMEHIEEAGVHSGDSACVLPPQTLSKNMMDEIRKATVNLALELQVK-GLINIQYAVK--- 861

Query: 379 GEVM-VIEMNPRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSI 437
            E++ +IE+NPR SR+    SKA G PI K A ++ +G SL  +P     K  A  + S+
Sbjct: 862 NEILYIIEVNPRASRTVPFVSKALGHPIVKYATRIMMGESLKNLP---LPKEMAFSQVSV 918

Query: 438 DYVVTKIPRFAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKA 483
             VV       F KFPG + +L  +M+S GE M +  T  E+F K+
Sbjct: 919 KEVV-----LPFNKFPGVDTILGPEMRSTGEVMGIASTAGEAFLKS 959


>gi|398341195|ref|ZP_10525898.1| carbamoyl phosphate synthase large subunit [Leptospira kirschneri
            serovar Bim str. 1051]
          Length = 1106

 Score = 1244 bits (3218), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 635/1119 (56%), Positives = 806/1119 (72%), Gaps = 58/1119 (5%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            +R ++R +LILG+GPIVIGQACEFDYSGTQA KALKE+G  VIL+NSNPATIMTDP LAD
Sbjct: 3    RRENIRSVLILGSGPIVIGQACEFDYSGTQAAKALKEKGIRVILLNSNPATIMTDPDLAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TY+ PMT  +V+++LEKE+PDA+LPT+GGQTALNLA+A   +G LEKY VELIGAK+DA
Sbjct: 63   ATYVEPMTVPVVQKILEKEKPDAILPTVGGQTALNLALACNSAGILEKYNVELIGAKVDA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            IKKAEDR+LFK+AM+ IGV+ P SG+ N L +   I N++G  PLI+RPAFTLGGTGGGI
Sbjct: 123  IKKAEDRELFKKAMEKIGVRVPASGLANNLKDAFEIKNKLG-LPLIVRPAFTLGGTGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AY +E FE +   GL AS  SQVL+E+S+LGWKE+ELEVMRDLADNVVIICSIEN+DPMG
Sbjct: 182  AYTEETFEEVVSKGLKASPISQVLLEESVLGWKEFELEVMRDLADNVVIICSIENIDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAP QTL+DKEYQ LRD SI+IIREIGVE GGSN+QFAVNP +G+V+VIEMN
Sbjct: 242  VHTGDSITVAPQQTLSDKEYQNLRDMSISIIREIGVETGGSNIQFAVNPANGDVIVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRF 447
            PRVSRSSALASKATGFPIAK+AA LS+GY+LD+I NDIT+ TPASFEPSIDYVVTK+PRF
Sbjct: 302  PRVSRSSALASKATGFPIAKIAALLSIGYTLDEIKNDITRVTPASFEPSIDYVVTKVPRF 361

Query: 448  AFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSN-VKEL---- 502
            AFEKFPG++  L  QMK+VGEAMA+GRTF+ESFQKALRSLE    G+G     +EL    
Sbjct: 362  AFEKFPGTDDTLGVQMKAVGEAMAIGRTFKESFQKALRSLEIDRYGFGSDGYFQELLYSR 421

Query: 503  ----DWDWEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVE 558
                D   E +   L+ PN  R+  +  A  +   VD+IH+L  +D+WFL Q ++L+ +E
Sbjct: 422  SLNNDQRKEWIDSHLKRPNDKRIFYVKLAFDEDYTVDQIHDLCKMDRWFLWQMEDLLKLE 481

Query: 559  QFLLTQSVSNMTKDDFYEVKRRGFSDKQIAFAT--------------------------K 592
            +    +  S ++K     +KR GFS++Q++F                            K
Sbjct: 482  REYSEKGNSILSK-----MKRAGFSNRQLSFLKNKKQILDLLDGNLRVDLKKTEIQNLLK 536

Query: 593  STEKEVREKRLSLGVIPSYKRVDTCAAEFEANTPYMYSSYDFECESAPTQKKKVLILGGG 652
             TE E+  +  +  ++P YKR+DTCA EFEA TPY YSSYD E ES  T  K V+ILGGG
Sbjct: 537  KTEDEIEAELDAKKILPVYKRIDTCAGEFEAYTPYFYSSYDDEDESDVTNAKSVMILGGG 596

Query: 653  PNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSNPETVSTDYDTSDRLYFEPLTVEDVLN 712
            PNRIGQGIEFDYCCC  S++LQ  G E+IM+NSNPETVSTDYDTSDRLYFEPLT+EDV  
Sbjct: 597  PNRIGQGIEFDYCCCQASYALQDLGIESIMINSNPETVSTDYDTSDRLYFEPLTLEDVYR 656

Query: 713  VIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHRLPSASGDGLVRIWGTSPDSIDAAEDR 772
            +   E+PEG+I+QFGGQTPLKL+  + +           G   V+I GTSPDSID AEDR
Sbjct: 657  IYQNEKPEGVIIQFGGQTPLKLAKDLEK----------KG---VKILGTSPDSIDRAEDR 703

Query: 773  ERFNAIIKELSIEQPKGGIAKSEADALAIAKEIGYPVVVRPSYVLGGRAMEIVYTDETLV 832
            +RF  ++++L +  P+ GIA S  +A  IA +IGYPV+VRPSYVLGGRAM I+  ++ L 
Sbjct: 704  KRFIEVLEKLKLNSPESGIATSMEEAREIAHKIGYPVLVRPSYVLGGRAMLIINEEKELD 763

Query: 833  TYLENAVEVDPERPVLIDKYLSDAIEIDVDALADSCGNVVIGGIMEHIEQAGVHSGDSAC 892
             Y+E A E+  +RP+LID +L DA+E+DVDAL D    V + GIMEHIE+AGVHSGDSAC
Sbjct: 764  RYMEKAEEISKDRPLLIDSFLEDAVEVDVDALCDG-EEVFVTGIMEHIEEAGVHSGDSAC 822

Query: 893  MIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNCQYAITTSGDVYLLEANPRASRTVPFV 952
            ++P +T+S + +D I   T+ LA  L V GL+N QYA+     +Y++E NPRASRTVPFV
Sbjct: 823  VLPPQTLSKNMMDEIRKATVNLALELQVKGLINIQYAVKNE-ILYIIEVNPRASRTVPFV 881

Query: 953  SKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRS 1012
            SKA+GHP+ KYA  +M G+SL +L   KE+    VSVKE VLPF KF G D +LGPEMRS
Sbjct: 882  SKALGHPIVKYATRIMMGESLKNLPLPKEMAFSQVSVKEVVLPFNKFPGVDTILGPEMRS 941

Query: 1013 TGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVFLSLNDLTKPHLERIAKAFLDIGFKIVS 1072
            TGEVMGI  +   AF K+Q  AG +LP  GTVF+S+ND TK  L    K   ++GF +++
Sbjct: 942  TGEVMGIASTAGEAFLKSQYMAGDELPSQGTVFVSINDKTKAELLSYIKDLSELGFNLIA 1001

Query: 1073 TSGTAHFLELKGIAVERVLKMHEGR-PHAGDMVANGQIQMMVITSSGDSLDQIDGLKLRR 1131
            TSGT  FL   GI   ++ K+++G  P A D +   +I  ++I +    + + D   +R+
Sbjct: 1002 TSGTHKFLSDNGILSSKINKVYDGVFPTALDYIRENKIH-LIINTPLSRVTRDDSFTIRQ 1060

Query: 1132 RGLAYKVPVITTVSGALANAEAIRSLKSNTVTMTALQDF 1170
              + +KVP +TT + A A  + +  +K+   T+ +LQ+ 
Sbjct: 1061 AAIRFKVPCLTTSNAAKALIKGMVEMKNKGFTIHSLQEI 1099



 Score =  231 bits (589), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 142/406 (34%), Positives = 228/406 (56%), Gaps = 21/406 (5%)

Query: 79  ASSKDQKLGKRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPAT 138
           +S  D+     T+ + ++ILG GP  IGQ  EFDY   QA  AL++ G E I+INSNP T
Sbjct: 574 SSYDDEDESDVTNAKSVMILGGGPNRIGQGIEFDYCCCQASYALQDLGIESIMINSNPET 633

Query: 139 IMTDPGLADRTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGV 198
           + TD   +DR Y  P+T E V ++ + E+P+ ++   GGQT L LA        LEK GV
Sbjct: 634 VSTDYDTSDRLYFEPLTLEDVYRIYQNEKPEGVIIQFGGQTPLKLA------KDLEKKGV 687

Query: 199 ELIGAKLDAIKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAF 258
           +++G   D+I +AEDR  F + ++ + + +P SGI  +++E   IA++IG +P+++RP++
Sbjct: 688 KILGTSPDSIDRAEDRKRFIEVLEKLKLNSPESGIATSMEEAREIAHKIG-YPVLVRPSY 746

Query: 259 TLGGTGGGIAYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIIC 318
            LGG    I   ++E +   +     S    +L++  L    E +++ + D  + V +  
Sbjct: 747 VLGGRAMLIINEEKELDRYMEKAEEISKDRPLLIDSFLEDAVEVDVDALCD-GEEVFVTG 805

Query: 319 SIENVDPMGVHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVD 378
            +E+++  GVH+GDS  V P QTL+      +R  ++ +  E+ V+ G  N+Q+AV    
Sbjct: 806 IMEHIEEAGVHSGDSACVLPPQTLSKNMMDEIRKATVNLALELQVK-GLINIQYAVK--- 861

Query: 379 GEVM-VIEMNPRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSI 437
            E++ +IE+NPR SR+    SKA G PI K A ++ +G SL  +P     K  A  + S+
Sbjct: 862 NEILYIIEVNPRASRTVPFVSKALGHPIVKYATRIMMGESLKNLP---LPKEMAFSQVSV 918

Query: 438 DYVVTKIPRFAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKA 483
             VV       F KFPG + +L  +M+S GE M +  T  E+F K+
Sbjct: 919 KEVV-----LPFNKFPGVDTILGPEMRSTGEVMGIASTAGEAFLKS 959


>gi|421091579|ref|ZP_15552347.1| carbamoyl-phosphate synthase, large subunit [Leptospira kirschneri
            str. 200802841]
 gi|409999645|gb|EKO50333.1| carbamoyl-phosphate synthase, large subunit [Leptospira kirschneri
            str. 200802841]
          Length = 1106

 Score = 1244 bits (3218), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 635/1119 (56%), Positives = 806/1119 (72%), Gaps = 58/1119 (5%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            +R ++R +LILG+GPIVIGQACEFDYSGTQA KALKE+G  VIL+NSNPATIMTDP LAD
Sbjct: 3    RRENIRSVLILGSGPIVIGQACEFDYSGTQAAKALKEKGIRVILLNSNPATIMTDPDLAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TY+ PMT  +V+++LEKE+PDA+LPT+GGQTALNLA+A   +G LEKY VELIGAK+DA
Sbjct: 63   ATYVEPMTVPVVQKILEKEKPDAILPTVGGQTALNLALACNSAGILEKYNVELIGAKVDA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            IKKAEDR+LFK+AM+ IGV+ P SG+ N L +   I N++G  PLI+RPAFTLGGTGGGI
Sbjct: 123  IKKAEDRELFKKAMEKIGVRVPASGLANNLKDAFEIKNKLG-LPLIVRPAFTLGGTGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AY +E FE +   GL AS  SQVL+E+S+LGWKE+ELEVMRDLADNVVIICSIEN+DPMG
Sbjct: 182  AYTEETFEEVVSKGLKASPISQVLLEESVLGWKEFELEVMRDLADNVVIICSIENIDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAP QTL+DKEYQ LRD SI+IIREIGVE GGSN+QFAVNP +G+V+VIEMN
Sbjct: 242  VHTGDSITVAPQQTLSDKEYQNLRDMSISIIREIGVETGGSNIQFAVNPANGDVIVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRF 447
            PRVSRSSALASKATGFPIAK+AA LS+GY+LD+I NDIT+ TPASFEPSIDYVVTK+PRF
Sbjct: 302  PRVSRSSALASKATGFPIAKIAALLSIGYTLDEIKNDITRVTPASFEPSIDYVVTKVPRF 361

Query: 448  AFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSN-VKEL---- 502
            AFEKFPG++  L  QMK+VGEAMA+GRTF+ESFQKALRSLE    G+G     +EL    
Sbjct: 362  AFEKFPGTDDTLGVQMKAVGEAMAIGRTFKESFQKALRSLEIDRYGFGSDGYFQELLYSR 421

Query: 503  ----DWDWEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVE 558
                D   E +   L+ PN  R+  +  A  +   VD+IH+L  +D+WFL Q ++L+ +E
Sbjct: 422  SLNNDQRKEWIDSHLKRPNDKRIFYVKLAFDEDYTVDQIHDLCKMDRWFLWQMEDLLKLE 481

Query: 559  QFLLTQSVSNMTKDDFYEVKRRGFSDKQIAFAT--------------------------K 592
            +    +  S ++K     +KR GFS++Q++F                            K
Sbjct: 482  REYSEKGNSILSK-----MKRAGFSNRQLSFLKNKKQILDLLDGNLRVDLKKTEIQNLLK 536

Query: 593  STEKEVREKRLSLGVIPSYKRVDTCAAEFEANTPYMYSSYDFECESAPTQKKKVLILGGG 652
             TE E+  +  +  ++P YKR+DTCA EFEA TPY YSSYD E ES  T  K V+ILGGG
Sbjct: 537  KTEDEIEAELDAKKILPVYKRIDTCAGEFEAYTPYFYSSYDDEDESDVTNAKSVMILGGG 596

Query: 653  PNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSNPETVSTDYDTSDRLYFEPLTVEDVLN 712
            PNRIGQGIEFDYCCC  S++LQ  G E+IM+NSNPETVSTDYDTSDRLYFEPLT+EDV  
Sbjct: 597  PNRIGQGIEFDYCCCQASYALQDLGIESIMINSNPETVSTDYDTSDRLYFEPLTLEDVYR 656

Query: 713  VIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHRLPSASGDGLVRIWGTSPDSIDAAEDR 772
            +   E+PEG+I+QFGGQTPLKL+  + +           G   V+I GTSPDSID AEDR
Sbjct: 657  IYQNEKPEGVIIQFGGQTPLKLAKDLEK----------KG---VKILGTSPDSIDRAEDR 703

Query: 773  ERFNAIIKELSIEQPKGGIAKSEADALAIAKEIGYPVVVRPSYVLGGRAMEIVYTDETLV 832
            +RF  ++++L +  P+ GIA S  +A  IA +IGYPV+VRPSYVLGGRAM I+  ++ L 
Sbjct: 704  KRFIEVLEKLKLNSPESGIATSMEEAREIAHKIGYPVLVRPSYVLGGRAMLIINEEKELD 763

Query: 833  TYLENAVEVDPERPVLIDKYLSDAIEIDVDALADSCGNVVIGGIMEHIEQAGVHSGDSAC 892
             Y+E A E+  +RP+LID +L DA+E+DVDAL D    V + GIMEHIE+AGVHSGDSAC
Sbjct: 764  RYMEKAEEISKDRPLLIDSFLEDAVEVDVDALCDG-EEVFVTGIMEHIEEAGVHSGDSAC 822

Query: 893  MIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNCQYAITTSGDVYLLEANPRASRTVPFV 952
            ++P +T+S + +D I   T+ LA  L V GL+N QYA+     +Y++E NPRASRTVPFV
Sbjct: 823  VLPPQTLSKNMMDEIRKATVNLALELQVKGLINIQYAVKNE-ILYIIEVNPRASRTVPFV 881

Query: 953  SKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRS 1012
            SKA+GHP+ KYA  +M G+SL +L   KE+    VSVKE VLPF KF G D +LGPEMRS
Sbjct: 882  SKALGHPIVKYATRIMMGESLKNLPLPKEMAFSQVSVKEVVLPFNKFPGVDTILGPEMRS 941

Query: 1013 TGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVFLSLNDLTKPHLERIAKAFLDIGFKIVS 1072
            TGEVMGI  +   AF K+Q  AG +LP  GTVF+S+ND TK  L    K   ++GF +++
Sbjct: 942  TGEVMGIASTAGEAFLKSQHMAGDELPSQGTVFVSINDKTKAELLSYIKDLSELGFNLIA 1001

Query: 1073 TSGTAHFLELKGIAVERVLKMHEGR-PHAGDMVANGQIQMMVITSSGDSLDQIDGLKLRR 1131
            TSGT  FL   GI   ++ K+++G  P A D +   +I  ++I +    + + D   +R+
Sbjct: 1002 TSGTHKFLSDNGILSSKINKVYDGVFPTALDYIRENKIH-LIINTPLSRVTRDDSFTIRQ 1060

Query: 1132 RGLAYKVPVITTVSGALANAEAIRSLKSNTVTMTALQDF 1170
              + +KVP +TT + A A  + +  +K+   T+ +LQ+ 
Sbjct: 1061 AAIRFKVPCLTTSNAAKALIKGMVEMKNKGFTIHSLQEI 1099



 Score =  231 bits (589), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 142/406 (34%), Positives = 228/406 (56%), Gaps = 21/406 (5%)

Query: 79  ASSKDQKLGKRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPAT 138
           +S  D+     T+ + ++ILG GP  IGQ  EFDY   QA  AL++ G E I+INSNP T
Sbjct: 574 SSYDDEDESDVTNAKSVMILGGGPNRIGQGIEFDYCCCQASYALQDLGIESIMINSNPET 633

Query: 139 IMTDPGLADRTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGV 198
           + TD   +DR Y  P+T E V ++ + E+P+ ++   GGQT L LA        LEK GV
Sbjct: 634 VSTDYDTSDRLYFEPLTLEDVYRIYQNEKPEGVIIQFGGQTPLKLA------KDLEKKGV 687

Query: 199 ELIGAKLDAIKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAF 258
           +++G   D+I +AEDR  F + ++ + + +P SGI  +++E   IA++IG +P+++RP++
Sbjct: 688 KILGTSPDSIDRAEDRKRFIEVLEKLKLNSPESGIATSMEEAREIAHKIG-YPVLVRPSY 746

Query: 259 TLGGTGGGIAYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIIC 318
            LGG    I   ++E +   +     S    +L++  L    E +++ + D  + V +  
Sbjct: 747 VLGGRAMLIINEEKELDRYMEKAEEISKDRPLLIDSFLEDAVEVDVDALCD-GEEVFVTG 805

Query: 319 SIENVDPMGVHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVD 378
            +E+++  GVH+GDS  V P QTL+      +R  ++ +  E+ V+ G  N+Q+AV    
Sbjct: 806 IMEHIEEAGVHSGDSACVLPPQTLSKNMMDEIRKATVNLALELQVK-GLINIQYAVK--- 861

Query: 379 GEVM-VIEMNPRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSI 437
            E++ +IE+NPR SR+    SKA G PI K A ++ +G SL  +P     K  A  + S+
Sbjct: 862 NEILYIIEVNPRASRTVPFVSKALGHPIVKYATRIMMGESLKNLP---LPKEMAFSQVSV 918

Query: 438 DYVVTKIPRFAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKA 483
             VV       F KFPG + +L  +M+S GE M +  T  E+F K+
Sbjct: 919 KEVV-----LPFNKFPGVDTILGPEMRSTGEVMGIASTAGEAFLKS 959


>gi|421110518|ref|ZP_15571013.1| carbamoyl-phosphate synthase, large subunit [Leptospira santarosai
            str. JET]
 gi|410804114|gb|EKS10237.1| carbamoyl-phosphate synthase, large subunit [Leptospira santarosai
            str. JET]
          Length = 1119

 Score = 1243 bits (3217), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 637/1119 (56%), Positives = 807/1119 (72%), Gaps = 58/1119 (5%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            +R D+R +LILG+GPIVIGQACEFDYSGTQA KALKE+G  V+L+NSNPATIMTDP LAD
Sbjct: 16   RREDIRSVLILGSGPIVIGQACEFDYSGTQAAKALKEKGIRVVLLNSNPATIMTDPDLAD 75

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TY+ PMT  +V+++LEKE+PDA+LPT+GGQTALNLA+A   +G LEKY VELIGAK+DA
Sbjct: 76   ATYVEPMTVPVVQKILEKEKPDAILPTVGGQTALNLALACNSAGLLEKYNVELIGAKVDA 135

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            IKKAEDR+LFK+AM+ IGV+ P SG+ N L + + I  ++G  PLI+RPAFTLGGTGGGI
Sbjct: 136  IKKAEDRELFKKAMEKIGVRVPASGLANNLTDAVEIKKKLG-LPLIVRPAFTLGGTGGGI 194

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AY +E FE     GL AS  SQVL+E+S+LGWKE+ELEVMRDLADNVVIICSIEN+DPMG
Sbjct: 195  AYTEETFEETVSKGLKASPISQVLLEESVLGWKEFELEVMRDLADNVVIICSIENLDPMG 254

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAP QTL+DKEYQ LRD SIAIIREIGVE GGSN+QFAVNP +G+V+VIEMN
Sbjct: 255  VHTGDSITVAPQQTLSDKEYQNLRDMSIAIIREIGVETGGSNIQFAVNPENGDVIVIEMN 314

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRF 447
            PRVSRSSALASKATGFPIAK+AA LS+GY+LD+I NDIT+ TPASFEPSIDYVVTK+PRF
Sbjct: 315  PRVSRSSALASKATGFPIAKIAALLSIGYTLDEIKNDITRVTPASFEPSIDYVVTKVPRF 374

Query: 448  AFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSN-VKEL---- 502
            AFEKFPG++  L  QMK+VGEAMA+GRTF+ESFQKALRSLE    G+G     +EL    
Sbjct: 375  AFEKFPGTDDTLGVQMKAVGEAMAIGRTFKESFQKALRSLEIDRYGFGSDGYFQELLYAR 434

Query: 503  ----DWDWEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVE 558
                D   E +   L+ PN  R+  I  A  +G  VD+IH+L  +D+WFL Q ++L+ +E
Sbjct: 435  SLNSDQRKEWIDSFLKRPNDKRIFYIKLAFDEGYTVDQIHDLCKVDRWFLWQMEDLLKLE 494

Query: 559  QFLLTQSVSNMTKDDFYEVKRRGFSDKQIAFAT--------------------------K 592
            +    +  S ++K     +KR GFS++Q++F                            K
Sbjct: 495  KEYSEKGNSVLSK-----MKRAGFSNRQLSFLKNKKRILNLLDDGLRVDLKKTEIQNLLK 549

Query: 593  STEKEVREKRLSLGVIPSYKRVDTCAAEFEANTPYMYSSYDFECESAPTQKKKVLILGGG 652
             +E+E+  +  S  + P YKR+DTCA EFEA TPY YSSYD E ES  T  K V+ILGGG
Sbjct: 550  KSEEEIEAELGSEKIFPVYKRIDTCAGEFEAYTPYFYSSYDEEDESDVTSAKSVMILGGG 609

Query: 653  PNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSNPETVSTDYDTSDRLYFEPLTVEDVLN 712
            PNRIGQGIEFDYCCC  S++LQ  G E+IM+NSNPETVSTDYDTSDRLYFEPLT+EDVL 
Sbjct: 610  PNRIGQGIEFDYCCCQASYALQDLGVESIMINSNPETVSTDYDTSDRLYFEPLTLEDVLA 669

Query: 713  VIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHRLPSASGDGLVRIWGTSPDSIDAAEDR 772
            +   E+PEG+I+QFGGQTPLKL+  + +           G   V+I GTSPDSID AEDR
Sbjct: 670  IYQNEKPEGVIIQFGGQTPLKLAKDLER----------KG---VKILGTSPDSIDRAEDR 716

Query: 773  ERFNAIIKELSIEQPKGGIAKSEADALAIAKEIGYPVVVRPSYVLGGRAMEIVYTDETLV 832
            +RF  ++++L +  P+ GIA S  +A  IA++I YPV+VRPSYVLGGRAM I+  ++ L 
Sbjct: 717  KRFVEVLEKLKLHSPESGIATSMEEAREIAQKIKYPVLVRPSYVLGGRAMLIINEEKELD 776

Query: 833  TYLENAVEVDPERPVLIDKYLSDAIEIDVDALADSCGNVVIGGIMEHIEQAGVHSGDSAC 892
             Y+E A E+  +RP+LID +L DA+E+DVDAL D   +V I GIMEHIE+AGVHSGDSAC
Sbjct: 777  RYMEKAEEISKDRPLLIDSFLEDAVEVDVDALCDG-KDVFITGIMEHIEEAGVHSGDSAC 835

Query: 893  MIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNCQYAITTSGDVYLLEANPRASRTVPFV 952
            ++P +T+S + +D I   T  LA  L V GL+N QYA+     +Y++E NPRASRTVPFV
Sbjct: 836  VLPPQTLSKNMMDEIRKATADLALELQVKGLINIQYAVKNEV-LYIIEVNPRASRTVPFV 894

Query: 953  SKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRS 1012
            SKA+GHP+ KYA  +M G+SL  L   KE+    VSVKE VLPF KF G D +LGPEMRS
Sbjct: 895  SKALGHPIVKYATRIMMGESLKSLPLPKEMAFSQVSVKEVVLPFNKFPGVDTILGPEMRS 954

Query: 1013 TGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVFLSLNDLTKPHLERIAKAFLDIGFKIVS 1072
            TGEVMGI  +   AF K+Q  AG +LP  GTVF+S+ND TK  L    +   ++GF +++
Sbjct: 955  TGEVMGIASTAGEAFLKSQYMAGDELPSQGTVFVSINDKTKSELLSYIRDLSELGFNLIA 1014

Query: 1073 TSGTAHFLELKGIAVERVLKMHEGR-PHAGDMVANGQIQMMVITSSGDSLDQIDGLKLRR 1131
            TSGT  FL   GI   ++ K+++G+ P A D +   +I  ++I +    + + D   +R+
Sbjct: 1015 TSGTHKFLSDNGILSSKINKVYDGKFPTALDYIRENKIH-LIINTPLSRVTRDDSFTIRQ 1073

Query: 1132 RGLAYKVPVITTVSGALANAEAIRSLKSNTVTMTALQDF 1170
              + +KVP +TT + A A  + +  +K+   T+ +LQ+ 
Sbjct: 1074 AAIRFKVPCLTTSNAAKALIKGMVEMKNKGFTIHSLQEI 1112


>gi|333367867|ref|ZP_08460098.1| carbamoyl-phosphate synthase, large subunit [Psychrobacter sp.
            1501(2011)]
 gi|332978288|gb|EGK15016.1| carbamoyl-phosphate synthase, large subunit [Psychrobacter sp.
            1501(2011)]
          Length = 1090

 Score = 1243 bits (3217), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 622/1082 (57%), Positives = 793/1082 (73%), Gaps = 42/1082 (3%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILI+GAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIKSILIIGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPAMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+T + VEQ+++KERPDA+LPTMGGQTALN A+ L ++G L+KY VELIGA  DA
Sbjct: 63   ATYIEPITWQTVEQIIDKERPDAILPTMGGQTALNCALDLDKNGVLKKYNVELIGASKDA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I+ AEDRDLF QAMK IG++ P + I  T+++   I  ++G FP IIRP+FT+GG+GGGI
Sbjct: 123  IEMAEDRDLFDQAMKRIGLECPRAEIAETMEQAFEIQAKLG-FPCIIRPSFTMGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN++EF  IC+ G   S T Q+L+++SL+GWKEYE+EV+RD  DN +IICSIEN DPMG
Sbjct: 182  AYNRDEFIEICERGFDLSPTHQLLIDESLIGWKEYEMEVVRDKNDNCIIICSIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGVE GGSNVQF VNP  G ++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQIMRNASLAVLREIGVETGGSNVQFGVNPKTGRMVVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT  KTPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKIAAKLAVGYTLDELQNDITGGKTPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            F FEKFP ++ +L+TQMKSVGE MA+GR FQES  KALR LE G  G+     +++D+  
Sbjct: 362  FNFEKFPQADNILSTQMKSVGEVMAIGRNFQESMHKALRGLETGADGFD----EQIDFAA 417

Query: 507  ------------EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKEL 554
                         ++K  L VP P+R+  I  A + G  V+E+   + ID WFL Q +++
Sbjct: 418  LKAGKISEEKVKSEIKQRLTVPTPERIFYIADAFRLGFSVEEVFGYTNIDPWFLVQIEDI 477

Query: 555  IDVEQFLLTQSVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRV 614
            ++ E+ +       +  ++  + KR+G SD ++A     ++K++R+KR  L V P YKRV
Sbjct: 478  VNTEEQVKLLGFGGLNANNLRKFKRKGLSDLRLAKLLGVSQKQLRKKRWDLEVYPVYKRV 537

Query: 615  DTCAAEFEANTPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQ 674
            DTCAAEF  +T YMYS+YD ECE+ PT  KK++++GGGPNRIGQGIEFDYCC H + +++
Sbjct: 538  DTCAAEFATSTAYMYSTYDEECEANPTNNKKIMVIGGGPNRIGQGIEFDYCCVHAALAMR 597

Query: 675  SAGYETIMMNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKL 734
              GYETIM+N NPETVSTDYDTSDRLYFE +T+EDVL ++ +E+P+G+IVQFGGQTPLKL
Sbjct: 598  EDGYETIMVNCNPETVSTDYDTSDRLYFESITLEDVLEIVRIEKPDGVIVQFGGQTPLKL 657

Query: 735  SLPIHQYLDEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKS 794
            +          R   A+G   V I GTSPD+ID AEDRERF  +I +L++ QP   +A S
Sbjct: 658  A----------RSLEAAG---VNIIGTSPDAIDRAEDRERFQHMIHQLNLIQPPNALATS 704

Query: 795  EADALAIAKEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLS 854
              D L  AK++GYP+VVRPSYVLGGRAMEIVY +E L  YL  AV+   E PVL+D++L 
Sbjct: 705  MEDGLVKAKDVGYPLVVRPSYVLGGRAMEIVYNEEELKHYLRTAVQASNEAPVLLDRFLD 764

Query: 855  DAIEIDVDALADSCGN-VVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIK 913
            DAIE+DVD ++D  GN VVIGGIM+HIEQAGVHSGDSAC +P  ++S    D + + TI 
Sbjct: 765  DAIEVDVDCVSD--GNEVVIGGIMQHIEQAGVHSGDSACSLPPYSLSEEICDEMRAQTIA 822

Query: 914  LAKRLNVCGLMNCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSL 973
            +AK L V GLMN Q+A+   G VY+LE NPRA+RTVPFVSK IG  LA+ AA  M+G+SL
Sbjct: 823  MAKELGVVGLMNVQFAV-KDGTVYILEVNPRAARTVPFVSKCIGISLAQIAARCMAGQSL 881

Query: 974  NDLGFTKEVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIA 1033
             D  FTKE+ P   +VKE+V PF KF G D +L PEM+STGEVMGI  +F  AF K  I 
Sbjct: 882  QDQNFTKEIKPSFFAVKESVFPFAKFPGVDPILSPEMKSTGEVMGIGKTFGEAFYKGIIG 941

Query: 1034 AGQKLP------LSGTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAV 1087
              ++LP       + TVF+S+ D  KP +  +A+  +D GFKIV+T+GT  +L  KGI  
Sbjct: 942  TNERLPGLPKEGETKTVFISVRDSDKPGIVAVAQQLIDYGFKIVATAGTEQYLTEKGIEC 1001

Query: 1088 ERVLKMHEGRPHAGDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGA 1147
            +R+ K+ EGRPH  D + NG+I +++ T+ G    Q D   +RR  L  KV  +TT+  A
Sbjct: 1002 KRINKVTEGRPHVVDALKNGEIDLIINTTEGKQA-QEDSFSIRRNALQSKVFYVTTLGAA 1060

Query: 1148 LA 1149
             A
Sbjct: 1061 DA 1062


>gi|410451690|ref|ZP_11305692.1| carbamoyl-phosphate synthase, large subunit [Leptospira sp. Fiocruz
            LV3954]
 gi|410014456|gb|EKO76586.1| carbamoyl-phosphate synthase, large subunit [Leptospira sp. Fiocruz
            LV3954]
          Length = 1106

 Score = 1243 bits (3216), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 637/1119 (56%), Positives = 807/1119 (72%), Gaps = 58/1119 (5%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            +R D+R +LILG+GPIVIGQACEFDYSGTQA KALKE+G  V+L+NSNPATIMTDP LAD
Sbjct: 3    RREDIRSVLILGSGPIVIGQACEFDYSGTQAAKALKEKGIRVVLLNSNPATIMTDPDLAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TY+ PMT  +V+++LEKE+PDA+LPT+GGQTALNLA+A   +G LEKY VELIGAK+DA
Sbjct: 63   ATYVEPMTVPVVQKILEKEKPDAILPTVGGQTALNLALACNSAGLLEKYNVELIGAKVDA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            IKKAEDR+LFK+AM+ IGV+ P SG+ N L + + I  ++G  PLI+RPAFTLGGTGGGI
Sbjct: 123  IKKAEDRELFKKAMEKIGVRVPASGLANNLTDAVEIKKKLG-LPLIVRPAFTLGGTGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AY +E FE     GL AS  SQVL+E+S+LGWKE+ELEVMRDLADNVVIICSIEN+DPMG
Sbjct: 182  AYTEETFEETVSKGLKASPISQVLLEESVLGWKEFELEVMRDLADNVVIICSIENIDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAP QTL+DKEYQ LRD SIAIIREIGVE GGSN+QFAVNP +G+V+VIEMN
Sbjct: 242  VHTGDSITVAPQQTLSDKEYQNLRDMSIAIIREIGVETGGSNIQFAVNPENGDVIVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRF 447
            PRVSRSSALASKATGFPIAK+AA LS+GY+LD+I NDIT+ TPASFEPSIDYVVTK+PRF
Sbjct: 302  PRVSRSSALASKATGFPIAKIAALLSIGYTLDEIKNDITRVTPASFEPSIDYVVTKVPRF 361

Query: 448  AFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSN-VKEL---- 502
            AFEKFPG++  L  QMK+VGEAMA+GRTF+ESFQKALRSLE    G+G     +EL    
Sbjct: 362  AFEKFPGTDDTLGVQMKAVGEAMAIGRTFKESFQKALRSLEIDRYGFGSDGYFQELLYAR 421

Query: 503  ----DWDWEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVE 558
                D   E +   L+ PN  R+  I  A  +G  VD+IH+L  +D+WFL Q ++L+ +E
Sbjct: 422  SLNSDQRKEWIDSFLKRPNDKRIFYIKLAFDEGYTVDQIHDLCKVDRWFLWQMEDLLKLE 481

Query: 559  QFLLTQSVSNMTKDDFYEVKRRGFSDKQIAFAT--------------------------K 592
            +    +  S ++K     +KR GFS++Q++F                            K
Sbjct: 482  KEYSEKGNSVLSK-----MKRAGFSNRQLSFLKNKKRILDLLDDGLRVDLKKMEIQNLLK 536

Query: 593  STEKEVREKRLSLGVIPSYKRVDTCAAEFEANTPYMYSSYDFECESAPTQKKKVLILGGG 652
             +E+E+  +  S  + P YKR+DTCA EFEA TPY YSSYD E ES  T  K V+ILGGG
Sbjct: 537  KSEEEIEVELGSEKIFPIYKRIDTCAGEFEAYTPYFYSSYDEEDESDVTSAKSVMILGGG 596

Query: 653  PNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSNPETVSTDYDTSDRLYFEPLTVEDVLN 712
            PNRIGQGIEFDYCCC  S++LQ  G E+IM+NSNPETVSTDYDTSDRLYFEPLT+EDVL 
Sbjct: 597  PNRIGQGIEFDYCCCQASYALQDLGVESIMINSNPETVSTDYDTSDRLYFEPLTLEDVLA 656

Query: 713  VIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHRLPSASGDGLVRIWGTSPDSIDAAEDR 772
            +   E+PEG+I+QFGGQTPLKL+  + +           G   V+I GTSPDSID AEDR
Sbjct: 657  IYQNEKPEGVIIQFGGQTPLKLAKDLER----------KG---VKILGTSPDSIDRAEDR 703

Query: 773  ERFNAIIKELSIEQPKGGIAKSEADALAIAKEIGYPVVVRPSYVLGGRAMEIVYTDETLV 832
            +RF  ++++L +  P+ GIA S  +A  IA++I YPV+VRPSYVLGGRAM I+  ++ L 
Sbjct: 704  KRFVEVLEKLKLHSPESGIATSMEEAREIAQKIKYPVLVRPSYVLGGRAMLIINEEKELD 763

Query: 833  TYLENAVEVDPERPVLIDKYLSDAIEIDVDALADSCGNVVIGGIMEHIEQAGVHSGDSAC 892
             Y+E A E+  +RP+LID +L DA+E+DVDAL D   +V I GIMEHIE+AGVHSGDSAC
Sbjct: 764  RYMEKAEEISKDRPLLIDSFLEDAVEVDVDALCDG-KDVFITGIMEHIEEAGVHSGDSAC 822

Query: 893  MIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNCQYAITTSGDVYLLEANPRASRTVPFV 952
            ++P +T+S + +D I   T  LA  L V GL+N QYA+     +Y++E NPRASRTVPFV
Sbjct: 823  VLPPQTLSKNMMDEIRKATADLALELQVKGLINIQYAVKNEV-LYIIEVNPRASRTVPFV 881

Query: 953  SKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRS 1012
            SKA+GHP+ KYA  +M G+SL  L   KE+    VSVKE VLPF KF G D +LGPEMRS
Sbjct: 882  SKALGHPIVKYATRIMMGESLKSLPLPKEMAFSQVSVKEVVLPFNKFPGVDTILGPEMRS 941

Query: 1013 TGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVFLSLNDLTKPHLERIAKAFLDIGFKIVS 1072
            TGEVMGI  +   AF K+Q  AG +LP  GTVF+S+ND TK  L    +   ++GF +++
Sbjct: 942  TGEVMGIASTAGEAFLKSQYMAGDELPSQGTVFVSINDKTKSELLSYIRDLSELGFNLIA 1001

Query: 1073 TSGTAHFLELKGIAVERVLKMHEGR-PHAGDMVANGQIQMMVITSSGDSLDQIDGLKLRR 1131
            TSGT  FL   GI   ++ K+++G+ P A D +   +I  ++I +    + + D   +R+
Sbjct: 1002 TSGTHKFLSDNGILSSKINKVYDGKFPTALDYIRENKIH-LIINTPLSRVTRDDSFTIRQ 1060

Query: 1132 RGLAYKVPVITTVSGALANAEAIRSLKSNTVTMTALQDF 1170
              + +KVP +TT + A A  + +  +K+   T+ +LQ+ 
Sbjct: 1061 AAIRFKVPCLTTSNAAKALIKGMVEMKNKGFTIHSLQEI 1099


>gi|148652642|ref|YP_001279735.1| carbamoyl-phosphate synthase large subunit [Psychrobacter sp. PRwf-1]
 gi|148571726|gb|ABQ93785.1| carbamoyl-phosphate synthase large subunit [Psychrobacter sp. PRwf-1]
          Length = 1086

 Score = 1243 bits (3216), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 623/1079 (57%), Positives = 791/1079 (73%), Gaps = 36/1079 (3%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILI+GAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIKSILIIGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPVMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+T + VEQ+++KERPDA+LPTMGGQTALN A+ L  +G LEKY VELIGA  DA
Sbjct: 63   ATYIEPITWQTVEQIIDKERPDAILPTMGGQTALNCALDLDRNGVLEKYNVELIGATKDA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I+ AEDR+LF QAMK IG++ P +    +++E   I  ++G FP IIRP+FT+GG+GGGI
Sbjct: 123  IEMAEDRELFDQAMKRIGLECPRAETAESMEEAFEIQAKLG-FPCIIRPSFTMGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN++EF  IC+ G   S T Q+L+++SL+GWKEYE+EV+RD  DN +IIC+IENVDPMG
Sbjct: 182  AYNRDEFIEICERGFDLSPTHQLLIDESLIGWKEYEMEVVRDKNDNCIIICAIENVDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGVE GGSNVQF VNP  G ++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQIMRNASLAVLREIGVETGGSNVQFGVNPKTGRMVVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT  KTPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKIAAKLAVGYTLDELQNDITGGKTPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECG---------FSGWGCS 497
            F FEKFP +E +L+TQMKSVGE MA+GR FQES  KALR LE G         F+     
Sbjct: 362  FNFEKFPQAENILSTQMKSVGEVMAIGRNFQESMHKALRGLETGADGFDEQIDFAALKAG 421

Query: 498  NVKELDWDWEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDV 557
             + E D    ++K  L VP P+R+  I  A + GM VDE+ +L+ ID WFL Q ++++  
Sbjct: 422  KISE-DKVKAEIKNRLTVPTPERIFYIADAFRLGMSVDEVFKLTNIDPWFLVQIEDIVKT 480

Query: 558  EQFLLTQSVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTC 617
            E+ +       +   +  + KR+G SD ++A     ++K++R+KR  L V P YKRVDTC
Sbjct: 481  EEQVKLLGFGGLNAANLRKFKRKGLSDLRLAKLLGVSQKQLRKKRWDLQVYPVYKRVDTC 540

Query: 618  AAEFEANTPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAG 677
            AAEF  +T YMYS+YD ECE+ PT  KK++++GGGPNRIGQGIEFDYCC H + +++  G
Sbjct: 541  AAEFATSTAYMYSTYDEECEANPTDNKKIMVIGGGPNRIGQGIEFDYCCVHAALAMREDG 600

Query: 678  YETIMMNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLP 737
            YETIM+N NPETVSTDYDTSDRLYFE +T+EDVL ++ +E+PEG+IVQFGGQTPLKL+  
Sbjct: 601  YETIMVNCNPETVSTDYDTSDRLYFESITLEDVLEIVRIEKPEGVIVQFGGQTPLKLA-- 658

Query: 738  IHQYLDEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEAD 797
                    R   A+G   V I GTSPD+ID AEDRERF  +I++L++ QP   +A S  D
Sbjct: 659  --------RALEAAG---VNIIGTSPDAIDRAEDRERFQHMIQQLNLIQPPNALATSMED 707

Query: 798  ALAIAKEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAI 857
             L  A  +GYP+VVRPSYVLGGRAMEIVY +E L  YL  AV+   E PVL+D++L DAI
Sbjct: 708  GLMKASSVGYPLVVRPSYVLGGRAMEIVYNEEELKHYLRTAVQASNEAPVLLDRFLDDAI 767

Query: 858  EIDVDALADSCGN-VVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAK 916
            E+DVD ++D  GN VVIGGIM+HIEQAGVHSGDSAC +P  ++S    D + + T+ +AK
Sbjct: 768  EVDVDCVSD--GNEVVIGGIMQHIEQAGVHSGDSACSLPPYSLSDEICDEMRAQTVAMAK 825

Query: 917  RLNVCGLMNCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDL 976
             L V GLMN Q+A+   G VY+LE NPRA+RTVPFVSK IG  LA+ AA  M+G SL D 
Sbjct: 826  ELGVVGLMNVQFAV-KDGTVYILEVNPRAARTVPFVSKCIGKSLAQVAARCMAGTSLQDQ 884

Query: 977  GFTKEVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQ 1036
             FT+E+ P   +VKE+V PF KF G D +L PEM+STGEVMG+  +F  AF K  I + +
Sbjct: 885  KFTQEIKPTFFAVKESVFPFAKFPGVDPILSPEMKSTGEVMGVGKTFGEAFYKGIIGSNE 944

Query: 1037 KLP------LSGTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERV 1090
            +LP       + TVF+S+ D  KP++  IAK  +D GFK+V+T+GT  +L  +GI  +R+
Sbjct: 945  RLPGLPKQGETKTVFISVRDSDKPNIAPIAKQLIDFGFKLVATAGTEQYLTEQGIECKRI 1004

Query: 1091 LKMHEGRPHAGDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALA 1149
             K+ EGRPH  D + NG+I +++ T+ G    Q D   +RR  L  KV  +TT+  A A
Sbjct: 1005 NKVTEGRPHVVDALKNGEIDLIINTTEGKQA-QEDSFSIRRNALQSKVFYVTTLGAADA 1062


>gi|315126859|ref|YP_004068862.1| carbamoyl phosphate synthase large subunit [Pseudoalteromonas sp.
            SM9913]
 gi|315015373|gb|ADT68711.1| carbamoyl phosphate synthase large subunit [Pseudoalteromonas sp.
            SM9913]
          Length = 1072

 Score = 1243 bits (3216), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 620/1077 (57%), Positives = 788/1077 (73%), Gaps = 18/1077 (1%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILILGAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  E+VE+++EKE+PDA+LPTMGGQTALN A+ L + G L K+GVELIGA  DA
Sbjct: 63   ATYIEPIHWEVVEKIIEKEKPDAVLPTMGGQTALNCALDLDKHGVLAKHGVELIGATADA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAE+R+ F  AM+ IG++ P + I +++DE       IG  P IIRP+FT+GGTGGG+
Sbjct: 123  IDKAENRERFDVAMRNIGLECPRAEIAHSMDEARDTMTRIG-LPCIIRPSFTMGGTGGGV 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN EEFE IC+ GL  S TS++L+++SL+GWKEYE+EV+RD  DN +I+CSIEN DPMG
Sbjct: 182  AYNMEEFEEICERGLDLSPTSELLIDESLIGWKEYEMEVVRDKKDNCIIVCSIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGVE GGSNVQF VNPVDG +++IEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQIMRNASMAVLREIGVETGGSNVQFGVNPVDGRMVIIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT  KTPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKIAAKLAVGYTLDELQNDITGGKTPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            F FEKF G+   LTTQMKSVGE MA+GR  QES QKALR LE G +G+      +     
Sbjct: 362  FNFEKFAGANDRLTTQMKSVGEVMAIGRNQQESLQKALRGLEVGATGFNPIVAFDDPKAK 421

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
            E++   LR P  +R+  I  AM+ GM V+++ EL+ ID W+L Q ++++  E  +    +
Sbjct: 422  EKIIRELREPGAERIWYIADAMRHGMSVEDVFELTKIDPWYLVQIEDILKDEAKISEVGM 481

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
            + +  D   ++KR+GF+D +IA     +E E+R+KR  L ++P YKRVDTCAAEF ++T 
Sbjct: 482  AGLNADFLRKLKRKGFADPRIAEIAGVSEAEIRKKRHQLNIVPVYKRVDTCAAEFSSDTA 541

Query: 627  YMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSN 686
            YMYSSYD ECE+  + + K++++GGGPNRIGQGIEFDYCC H + +L+  GYETIM+N N
Sbjct: 542  YMYSSYDEECEANASDRDKIMVIGGGPNRIGQGIEFDYCCVHAALALREDGYETIMVNCN 601

Query: 687  PETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHR 746
            PETVSTDYDTSDRLYFEP+T+EDVL ++ +E+P+G+IVQ+GGQTPLKL+          R
Sbjct: 602  PETVSTDYDTSDRLYFEPITLEDVLEIVRVEKPKGVIVQYGGQTPLKLA----------R 651

Query: 747  LPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEIG 806
               A+G   V + GTSPD+ID AEDRERF  +++ L + QP+     S  +A+  + EIG
Sbjct: 652  ELEANG---VPVIGTSPDAIDRAEDRERFQQLVERLDLLQPENATVTSTEEAILKSVEIG 708

Query: 807  YPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALAD 866
            +P+VVRPSYVLGGRAMEIVY ++ L  Y+  AV    E PVL+D++L +AIE+DVDA+ D
Sbjct: 709  FPLVVRPSYVLGGRAMEIVYDEQDLRRYMTEAVSASNEAPVLLDRFLDNAIEVDVDAICD 768

Query: 867  SCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNC 926
                V+IGGIMEHIEQAGVHSGDSAC +P  +++    D +      +A  L V GLMN 
Sbjct: 769  G-EQVIIGGIMEHIEQAGVHSGDSACSLPAHSLTQEVQDVMRKQVTDMALELGVVGLMNT 827

Query: 927  QYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPKH 986
            Q+A+   G VYL+E NPRA+RTVPFVSKA G  LAK AA  M+G+SL   G TKEVIP +
Sbjct: 828  QFAV-KDGKVYLIEVNPRAARTVPFVSKATGVALAKVAARCMAGQSLASQGITKEVIPPY 886

Query: 987  VSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVFL 1046
             SVKE VLPF KFQG D + GPEMRSTGEVMG+  +F  AFAKAQ+ A   LP  G   L
Sbjct: 887  YSVKEVVLPFAKFQGVDPIRGPEMRSTGEVMGVGDTFAEAFAKAQLGASNTLPRGGRALL 946

Query: 1047 SLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVAN 1106
            S+ +  KP +  +AK   D+GF++ +T GTA  LE  GI V RV K++EGRPH  D + N
Sbjct: 947  SVRNSDKPRIVELAKTMTDLGFELDATGGTAAALEDAGITVRRVNKVYEGRPHILDRIKN 1006

Query: 1107 GQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTVT 1163
            G+   +V T+ G    + D   LRR  L +K    TT++ A AN  A ++   + VT
Sbjct: 1007 GEYSYIVNTTEGRQAIE-DSKVLRRGALQHKTNYTTTLNAAFANCTANQADDRSKVT 1062



 Score =  239 bits (611), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 155/422 (36%), Positives = 239/422 (56%), Gaps = 24/422 (5%)

Query: 67  KIDS-SAELSNGAA---SSKDQKL-GKRTDLRKILILGAGPIVIGQACEFDYSGTQACKA 121
           ++D+ +AE S+  A   SS D++     +D  KI+++G GP  IGQ  EFDY    A  A
Sbjct: 528 RVDTCAAEFSSDTAYMYSSYDEECEANASDRDKIMVIGGGPNRIGQGIEFDYCCVHAALA 587

Query: 122 LKEEGYEVILINSNPATIMTDPGLADRTYITPMTPELVEQVLEKERPDALLPTMGGQTAL 181
           L+E+GYE I++N NP T+ TD   +DR Y  P+T E V +++  E+P  ++   GGQT L
Sbjct: 588 LREDGYETIMVNCNPETVSTDYDTSDRLYFEPITLEDVLEIVRVEKPKGVIVQYGGQTPL 647

Query: 182 NLAVALAESGALEKYGVELIGAKLDAIKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECI 241
            LA        LE  GV +IG   DAI +AEDR+ F+Q ++ + +  P +    + +E I
Sbjct: 648 KLA------RELEANGVPVIGTSPDAIDRAEDRERFQQLVERLDLLQPENATVTSTEEAI 701

Query: 242 SIANEIGEFPLIIRPAFTLGGTGGGIAYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKE 301
             + EIG FPL++RP++ LGG    I Y++++        ++AS  + VL+++ L    E
Sbjct: 702 LKSVEIG-FPLVVRPSYVLGGRAMEIVYDEQDLRRYMTEAVSASNEAPVLLDRFLDNAIE 760

Query: 302 YELEVMRDLADNVVIICSIENVDPMGVHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREI 361
            +++ + D  + V+I   +E+++  GVH+GDS    PA +LT +    +R     +  E+
Sbjct: 761 VDVDAICD-GEQVIIGGIMEHIEQAGVHSGDSACSLPAHSLTQEVQDVMRKQVTDMALEL 819

Query: 362 GVECGGSNVQFAVNPVDGEVMVIEMNPRVSRSSALASKATGFPIAKMAAKLSVGYSLDQI 421
           GV  G  N QFAV   DG+V +IE+NPR +R+    SKATG  +AK+AA+   G SL   
Sbjct: 820 GV-VGLMNTQFAVK--DGKVYLIEVNPRAARTVPFVSKATGVALAKVAARCMAGQSL--A 874

Query: 422 PNDITKKTPASFEPSIDYVVTKIPRFAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQ 481
              ITK+    +     Y V ++    F KF G +P+   +M+S GE M +G TF E+F 
Sbjct: 875 SQGITKEVIPPY-----YSVKEVV-LPFAKFQGVDPIRGPEMRSTGEVMGVGDTFAEAFA 928

Query: 482 KA 483
           KA
Sbjct: 929 KA 930


>gi|407781740|ref|ZP_11128957.1| carbamoyl phosphate synthase large subunit [Oceanibaculum indicum
            P24]
 gi|407207366|gb|EKE77303.1| carbamoyl phosphate synthase large subunit [Oceanibaculum indicum
            P24]
          Length = 1084

 Score = 1243 bits (3216), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 634/1097 (57%), Positives = 800/1097 (72%), Gaps = 34/1097 (3%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD+  ILI+GAGPIVIGQACEFDYSGTQACKALK+EGY VIL+NSNPATIMTDPGLAD
Sbjct: 3    KRTDISSILIIGAGPIVIGQACEFDYSGTQACKALKDEGYRVILVNSNPATIMTDPGLAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+TP +V +++EKERPDALLPTMGGQTALN A  LA  G LEK+GVELIGA L+A
Sbjct: 63   ATYIEPITPAIVAKIIEKERPDALLPTMGGQTALNTARDLARDGTLEKFGVELIGADLEA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I+KAEDR LF++AM  IGV +P S +  +++   +   ++G  P IIRP+FTLGG GGGI
Sbjct: 123  IEKAEDRQLFREAMDRIGVPSPKSSLIKSMEAADAALADVG-LPAIIRPSFTLGGQGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEFE I + GL  S   +VL+E+S+LGWKE+E+EV+RD ADN +I+CSIEN+DPMG
Sbjct: 182  AYNREEFEQIVQQGLRLSPVHEVLIEESVLGWKEFEMEVVRDRADNCIIVCSIENIDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPA TLTDKEYQR+RD SIA +REIGV+ GGSNVQFAVNP DG ++VIEMN
Sbjct: 242  VHTGDSITVAPALTLTDKEYQRMRDASIACLREIGVDTGGSNVQFAVNPEDGRLVVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRF 447
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT  TPASFEP+IDYVVTK+PRF
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGYTLDELDNDITGVTPASFEPTIDYVVTKMPRF 361

Query: 448  AFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW- 506
             FEKFPGSE +L+T MKSVGEAMA+GRTFQES QKALRS+E G +G     +   + D  
Sbjct: 362  TFEKFPGSEAILSTSMKSVGEAMAIGRTFQESLQKALRSMETGLTGLNEVEIPGAEGDQV 421

Query: 507  --EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQ 564
                +  +L    PDR+     A++ G+ V+EI++   ID WFL Q +E++  E  +   
Sbjct: 422  DRAAIVAALTKSTPDRLLRTAQALRLGLTVEEIYDACAIDPWFLRQIEEIVAAEAEVRKS 481

Query: 565  SVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEAN 624
             +    K   + +K+ GFSD +++     +E EV  +R  L + P YKR+DTCAAEF + 
Sbjct: 482  GLPE-NKQGLHRLKQMGFSDARLSELAGLSEDEVAARRRILDIHPVYKRIDTCAAEFASR 540

Query: 625  TPYMYSSYD------FECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGY 678
            TPYMYS+Y+       ECES P+ +KK++ILGGGPNRIGQGIEFDYCC H +F+L  AG+
Sbjct: 541  TPYMYSTYEGNGLEPAECESEPSDRKKIIILGGGPNRIGQGIEFDYCCVHAAFALSEAGF 600

Query: 679  ETIMMNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGI----IVQFGGQTPLKL 734
            ETIM+N NPETVSTDYDTSDRLYFEPLT EDV+ ++  E+  G     IVQFGGQTPLKL
Sbjct: 601  ETIMVNCNPETVSTDYDTSDRLYFEPLTAEDVIALVRREQTNGTVLGAIVQFGGQTPLKL 660

Query: 735  SLPIHQYLDEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKS 794
            +             +A     + I GTSPD+ID AEDR+RF  ++K+L + QP    A S
Sbjct: 661  A-------------AALEAAKIPILGTSPDAIDLAEDRKRFQQLLKQLGLRQPANDTAFS 707

Query: 795  EADALAIAKEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLS 854
              +A  IA EIG+PVV+RPSYVLGGRAMEIV+    L  Y+ +AV+V  + PVLID +LS
Sbjct: 708  AEEAEKIAVEIGFPVVIRPSYVLGGRAMEIVHDVSQLRRYMRDAVKVSGKNPVLIDDFLS 767

Query: 855  DAIEIDVDALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKL 914
             A E+DVDALAD   +V + GIMEHIE+AG+HSGDSAC +P  T+    ++ I + T  L
Sbjct: 768  HATEVDVDALADG-DDVHVAGIMEHIEEAGIHSGDSACSLPPITLPVDIVEEIRTQTRLL 826

Query: 915  AKRLNVCGLMNCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLN 974
            A+ L V GLMN Q+A+    D+Y+LE NPRASRTVPFV+KA G P+AK A+ VM+G+ L 
Sbjct: 827  AQGLKVVGLMNVQFAVKGR-DIYILEVNPRASRTVPFVAKATGVPIAKIASRVMAGEKLA 885

Query: 975  DLGFTKEVIP-KHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIA 1033
              GF     P KHV+VKEAV PF +F G D++LGPEM+STGEVMGIDM F +AFAK+Q+A
Sbjct: 886  --GFNLSTRPLKHVAVKEAVFPFARFPGVDLILGPEMKSTGEVMGIDMDFGLAFAKSQLA 943

Query: 1034 AGQKLPLSGTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKM 1093
            AG +LP SGTVF+S+ D  KP    +AK  +  GFKI++TSGTA+  + +G+ V+RV K+
Sbjct: 944  AGVELPQSGTVFISVKDDDKPLATILAKKLVSFGFKIIATSGTANHFKQEGLTVDRVKKV 1003

Query: 1094 HEGRPHAGDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEA 1153
             EGRPH  D + +G +  +V  S+  +    D   LRR  L + +P  TTV GA A  +A
Sbjct: 1004 LEGRPHIVDNMLSGHVD-LVFNSTEGAQAIADSFSLRRTALTHNIPYYTTVEGARAAVQA 1062

Query: 1154 IRSLKSNTVTMTALQDF 1170
            I +L+S  + +  LQ +
Sbjct: 1063 IEALRSGRIEVAPLQSY 1079


>gi|90416146|ref|ZP_01224078.1| carbamoyl-phosphate synthase, large subunit [gamma proteobacterium
            HTCC2207]
 gi|90331871|gb|EAS47085.1| carbamoyl-phosphate synthase, large subunit [marine gamma
            proteobacterium HTCC2207]
          Length = 1072

 Score = 1243 bits (3216), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 615/1076 (57%), Positives = 795/1076 (73%), Gaps = 18/1076 (1%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILILGAGPI+IGQACEFDYSG QACKAL+EEG+ VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIKSILILGAGPIIIGQACEFDYSGAQACKALREEGFRVILVNSNPATIMTDPAMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+    VE ++ +E+PDALLPTMGGQTALN A+ LA+ G LEKYGVE+IGA  DA
Sbjct: 63   ATYIEPVEWRTVEHIIAQEKPDALLPTMGGQTALNCALDLAKHGVLEKYGVEMIGANADA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR+ F +AMK IG+ TP SGI ++++E I +++  G FP +IRP+FT+GG+GGGI
Sbjct: 123  IDKAEDRERFDKAMKAIGLDTPNSGIAHSMEEAIQVSDRFG-FPCVIRPSFTMGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEFE IC+ GL  S T+++L+++SL+GWKE+E+EV+RD  DN +IIC+IEN+DPMG
Sbjct: 182  AYNREEFEEICRRGLDLSPTNELLIDESLIGWKEFEMEVVRDRKDNCIIICAIENLDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            +HTGDSITVAPAQTLTDKEYQ +R+ SI ++REIGVE GGSNVQFAVNP DG ++VIEMN
Sbjct: 242  IHTGDSITVAPAQTLTDKEYQIMRNASIKVLREIGVETGGSNVQFAVNPEDGRLIVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITK-KTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIA++AAKL+VGY+LD++ N+IT   TPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIARVAAKLAVGYTLDELQNEITGGATPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            FAFEKF  ++  LTTQMKSVGE MA+GRTFQES QKALR LE G SG+      E +   
Sbjct: 362  FAFEKFEQADQSLTTQMKSVGEVMAIGRTFQESLQKALRGLEVGASGFDPKITDETENPE 421

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
              L   L V  PDR+  +  A + GM +D++   + +D WFL Q ++LI  E  L   S+
Sbjct: 422  AVLNSELAVAGPDRIWYLGDAFRHGMSLDDVFARTKVDPWFLVQIEDLIKDELVLAQHSL 481

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
            S++ +   Y +KR+GFSD++I       E  VRE R  LG+ P YKRVDTCAAEF  +T 
Sbjct: 482  SDLDEKSLYRLKRKGFSDRRIGDVLGCGETAVRELRYDLGLHPVYKRVDTCAAEFSTDTA 541

Query: 627  YMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSN 686
            YMYS+Y+ ECE+ P+ + K+L+LGGGPNRIGQGIEFDYCC H + +++  GYETIM+N N
Sbjct: 542  YMYSTYEEECEARPSNRDKILVLGGGPNRIGQGIEFDYCCVHAALAMREDGYETIMVNCN 601

Query: 687  PETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHR 746
            PETVSTDYDTSDRL+FEP+T+EDVL ++ +E+P+G+IVQFGGQTPLKL+          R
Sbjct: 602  PETVSTDYDTSDRLFFEPVTLEDVLEIVRIEKPKGVIVQFGGQTPLKLA----------R 651

Query: 747  LPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEIG 806
               A+G   V I GT+PD+ID AEDRERF  +I++L + QP+   A+S   A+ +AKEIG
Sbjct: 652  ALEAAG---VPIVGTTPDAIDRAEDRERFQQMIQKLGLLQPQNATARSADQAVELAKEIG 708

Query: 807  YPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALAD 866
            YP+VVRPSYVLGGRAMEIVY ++ L  Y++ AV+V  + PVL+D +L +AIE+DVDA++D
Sbjct: 709  YPLVVRPSYVLGGRAMEIVYKEDELRHYMKTAVQVSDDSPVLLDFFLPNAIEMDVDAVSD 768

Query: 867  SCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNC 926
                VVIG IM+HIEQAG+HSGDSAC +P  ++     + +     K+A  L V GLMN 
Sbjct: 769  G-EQVVIGAIMQHIEQAGIHSGDSACSLPPYSLGEDIQNEMREVCKKMALELGVRGLMNV 827

Query: 927  QYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPKH 986
            Q A+   G +Y++E NPRASRTVPFVSK IG  LAK AA  M G+SL   GFTKE+IP +
Sbjct: 828  QLAL-QDGLIYVIEVNPRASRTVPFVSKCIGTSLAKIAARCMVGQSLESQGFTKEIIPPY 886

Query: 987  VSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVFL 1046
             SVKEAV PF KF G D +LGPEM+STGEVMG+  +F  A+ KA++ A  ++P SGT F+
Sbjct: 887  FSVKEAVFPFNKFPGTDPILGPEMKSTGEVMGVGATFAEAYGKAELGASDEIPTSGTAFV 946

Query: 1047 SLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVAN 1106
            S+ +  K  +  +A    D+GFK+V+T+GTA  ++  G+AV  V K+ EGRPH  DM+ +
Sbjct: 947  SVRERDKHQVAALATQLSDLGFKLVATAGTAKLIKQAGLAVTIVNKVKEGRPHIVDMIKS 1006

Query: 1107 GQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTV 1162
             +I +++ T+ G      D   +R     ++V   TT++G  A  +A+      TV
Sbjct: 1007 DKINLIINTTEGRQAIS-DSSAIRYSAEQHRVYYTTTMAGGNAVCQALNFDGETTV 1061


>gi|422002301|ref|ZP_16349539.1| carbamoyl phosphate synthase large subunit [Leptospira santarosai
            serovar Shermani str. LT 821]
 gi|417259233|gb|EKT88612.1| carbamoyl phosphate synthase large subunit [Leptospira santarosai
            serovar Shermani str. LT 821]
          Length = 1106

 Score = 1243 bits (3216), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 637/1119 (56%), Positives = 807/1119 (72%), Gaps = 58/1119 (5%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            +R D+R +LILG+GPIVIGQACEFDYSGTQA KALKE+G  V+L+NSNPATIMTDP LAD
Sbjct: 3    RREDIRSVLILGSGPIVIGQACEFDYSGTQAAKALKEKGIRVVLLNSNPATIMTDPDLAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TY+ PMT  +V+++LEKE+PDA+LPT+GGQTALNLA+A   +G LEKY VELIGAK+DA
Sbjct: 63   ATYVEPMTVPVVQKILEKEKPDAILPTVGGQTALNLALACNSAGLLEKYNVELIGAKVDA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            IKKAEDR+LFK+AM+ IGV+ P SG+ N L + + I  ++G  PLI+RPAFTLGGTGGGI
Sbjct: 123  IKKAEDRELFKKAMEKIGVRVPASGLTNNLTDAVEIKKKLG-LPLIVRPAFTLGGTGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AY +E FE     GL AS  SQVL+E+S+LGWKE+ELEVMRDLADNVVIICSIEN+DPMG
Sbjct: 182  AYTEETFEETVSKGLKASPISQVLLEESVLGWKEFELEVMRDLADNVVIICSIENLDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAP QTL+DKEYQ LRD SIAIIREIGVE GGSN+QFAVNP +G+V+VIEMN
Sbjct: 242  VHTGDSITVAPQQTLSDKEYQNLRDMSIAIIREIGVETGGSNIQFAVNPENGDVIVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRF 447
            PRVSRSSALASKATGFPIAK+AA LS+GY+LD+I NDIT+ TPASFEPSIDYVVTK+PRF
Sbjct: 302  PRVSRSSALASKATGFPIAKIAALLSIGYTLDEIKNDITRVTPASFEPSIDYVVTKVPRF 361

Query: 448  AFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSN-VKEL---- 502
            AFEKFPG++  L  QMK+VGEAMA+GRTF+ESFQKALRSLE    G+G     +EL    
Sbjct: 362  AFEKFPGTDDTLGVQMKAVGEAMAIGRTFKESFQKALRSLEIDRYGFGSDGYFQELLYAR 421

Query: 503  ----DWDWEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVE 558
                D   E +   L+ PN  R+  I  A  +G  VD+IH+L  +D+WFL Q ++L+ +E
Sbjct: 422  SLNSDQRKEWIDSFLKRPNDKRIFYIKLAFDEGYTVDQIHDLCKVDRWFLWQMEDLLKLE 481

Query: 559  QFLLTQSVSNMTKDDFYEVKRRGFSDKQIAFAT--------------------------K 592
            +    +  S ++K     +KR GFS++Q++F                            K
Sbjct: 482  KEYSEKGNSVLSK-----MKRAGFSNRQLSFLKNKKQILNLLDDGLRVDLKKTEIQNLLK 536

Query: 593  STEKEVREKRLSLGVIPSYKRVDTCAAEFEANTPYMYSSYDFECESAPTQKKKVLILGGG 652
             +E+E+  +  S  + P YKR+DTCA EFEA TPY YSSYD E ES  T  K V+ILGGG
Sbjct: 537  KSEEEIEAELGSEKIFPVYKRIDTCAGEFEAYTPYFYSSYDEEDESDVTSAKSVMILGGG 596

Query: 653  PNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSNPETVSTDYDTSDRLYFEPLTVEDVLN 712
            PNRIGQGIEFDYCCC  S++LQ  G E+IM+NSNPETVSTDYDTSDRLYFEPLT+EDVL 
Sbjct: 597  PNRIGQGIEFDYCCCQASYALQDLGVESIMINSNPETVSTDYDTSDRLYFEPLTLEDVLA 656

Query: 713  VIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHRLPSASGDGLVRIWGTSPDSIDAAEDR 772
            +   E+PEG+I+QFGGQTPLKL+  + +           G   V+I GTSPDSID AEDR
Sbjct: 657  IYQNEKPEGVIIQFGGQTPLKLAKDLER----------KG---VKILGTSPDSIDRAEDR 703

Query: 773  ERFNAIIKELSIEQPKGGIAKSEADALAIAKEIGYPVVVRPSYVLGGRAMEIVYTDETLV 832
            +RF  ++++L +  P+ GIA S  +A  IA++I YPV+VRPSYVLGGRAM I+  ++ L 
Sbjct: 704  KRFVEVLEKLKLHSPESGIATSMEEAREIAQKIKYPVLVRPSYVLGGRAMLIINEEKELD 763

Query: 833  TYLENAVEVDPERPVLIDKYLSDAIEIDVDALADSCGNVVIGGIMEHIEQAGVHSGDSAC 892
             Y+E A E+  +RP+LID +L DA+E+DVDAL D   +V I GIMEHIE+AGVHSGDSAC
Sbjct: 764  RYMEKAEEISKDRPLLIDSFLEDAVEVDVDALCDG-KDVFITGIMEHIEEAGVHSGDSAC 822

Query: 893  MIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNCQYAITTSGDVYLLEANPRASRTVPFV 952
            ++P +T+S + +D I   T  LA  L V GL+N QYA+     +Y++E NPRASRTVPFV
Sbjct: 823  VLPPQTLSKNMMDEIRKATADLALELQVKGLINIQYAVKNEV-LYIIEVNPRASRTVPFV 881

Query: 953  SKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRS 1012
            SKA+GHP+ KYA  +M G+SL  L   KE+    VSVKE VLPF KF G D +LGPEMRS
Sbjct: 882  SKALGHPIVKYATRIMMGESLKSLPLPKEMAFSQVSVKEVVLPFNKFPGVDTILGPEMRS 941

Query: 1013 TGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVFLSLNDLTKPHLERIAKAFLDIGFKIVS 1072
            TGEVMGI  +   AF K+Q  AG +LP  GTVF+S+ND TK  L    +   ++GF +++
Sbjct: 942  TGEVMGIASTAGEAFLKSQYMAGDELPSQGTVFVSINDKTKSELLSYIRDLSELGFNLIA 1001

Query: 1073 TSGTAHFLELKGIAVERVLKMHEGR-PHAGDMVANGQIQMMVITSSGDSLDQIDGLKLRR 1131
            TSGT  FL   GI   ++ K+++G+ P A D +   +I  ++I +    + + D   +R+
Sbjct: 1002 TSGTHKFLSDNGILSSKINKVYDGKFPTALDYIRENKIH-LIINTPLSRVTRDDSFTIRQ 1060

Query: 1132 RGLAYKVPVITTVSGALANAEAIRSLKSNTVTMTALQDF 1170
              + +KVP +TT + A A  + +  +K+   T+ +LQ+ 
Sbjct: 1061 AAIRFKVPCLTTSNAAKALIKGMVEMKNKGFTIHSLQEI 1099


>gi|392543980|ref|ZP_10291117.1| carbamoyl phosphate synthase large subunit [Pseudoalteromonas
            piscicida JCM 20779]
          Length = 1072

 Score = 1243 bits (3216), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 624/1067 (58%), Positives = 782/1067 (73%), Gaps = 18/1067 (1%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILILGAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  E+VE+++EKE+PDA+LPTMGGQTALN A+ L + G L K+GVELIGA  DA
Sbjct: 63   ATYIEPIHWEVVEKIIEKEKPDAVLPTMGGQTALNCALDLDKHGVLAKHGVELIGATADA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAE+R+ F  AMK IG++ P + I +++DE   I   IG FP IIRP+FT+GGTGGG+
Sbjct: 123  IDKAENRERFDAAMKNIGLECPRAEIAHSMDEAHDILTRIG-FPCIIRPSFTMGGTGGGV 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN EEF+ IC  GL  S T+++L+++SLLGWKEYE+EV+RD  DN +I+CSIEN DPMG
Sbjct: 182  AYNMEEFDEICTRGLDLSPTNELLIDESLLGWKEYEMEVVRDKNDNCIIVCSIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGVE GGSNVQF VNPVDG +++IEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQIMRNASMAVLREIGVETGGSNVQFGVNPVDGRMVIIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT   TPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKIAAKLAVGYTLDELQNDITGGATPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            F FEKF GS   LTTQMKSVGE MA+GR  QES QKALR LE G +G       +     
Sbjct: 362  FNFEKFAGSNDRLTTQMKSVGEVMAIGRNQQESLQKALRGLEVGATGLNPIVALDAPNAK 421

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
            E +   LR P  +R+  I  AM+ GM V+E+ EL+ +D W+L Q ++++  E  +    +
Sbjct: 422  ETIIRELREPGAERIWYIADAMRHGMSVEEVFELTKVDPWYLVQIEDILKDEATIAEVGM 481

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
            + + KD    +KR+GFSD +IA     +EKE+R+KR  L ++P YKRVDTCAAEF ++T 
Sbjct: 482  AGLNKDFLRRLKRKGFSDARIAEIAGVSEKEIRKKRHQLEILPVYKRVDTCAAEFSSDTA 541

Query: 627  YMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSN 686
            YMYS+YD ECE+ P+ K K++++GGGPNRIGQGIEFDYCC H + +++  GYETIM+N N
Sbjct: 542  YMYSTYDEECEANPSDKDKIMVIGGGPNRIGQGIEFDYCCVHAALAMREDGYETIMVNCN 601

Query: 687  PETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHR 746
            PETVSTDYDTSDRL+FE +T+EDVL ++ +E+P+G+IVQ+GGQTPLKL+          R
Sbjct: 602  PETVSTDYDTSDRLFFELITLEDVLEIVRVEKPKGVIVQYGGQTPLKLA----------R 651

Query: 747  LPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEIG 806
               A+G   V + GTSPD+ID AEDRERF  +++ L++ QP+     S  +A+A ++EIG
Sbjct: 652  DLEANG---VPVIGTSPDAIDRAEDRERFQQLVERLNLLQPENATVTSLEEAVAKSQEIG 708

Query: 807  YPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALAD 866
            +P+VVRPSYVLGGRAMEIVY ++ L  Y+  AV V  E PVL+D++L DAIE+DVDA+ D
Sbjct: 709  FPLVVRPSYVLGGRAMEIVYDEDDLRRYMTEAVSVSNEAPVLLDRFLDDAIEVDVDAICD 768

Query: 867  SCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNC 926
               NV+IGGIMEHIEQAGVHSGDSAC +P  T+     D +      +A  L V GLMN 
Sbjct: 769  G-ENVIIGGIMEHIEQAGVHSGDSACSLPAHTLPQDIQDVMRKQVRDMALELGVVGLMNT 827

Query: 927  QYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPKH 986
            Q+A+   G VYL+E NPRA+RTVPFVSKA G  LAK AA  M G+SL   G TKEVIP +
Sbjct: 828  QFAV-KDGQVYLIEVNPRAARTVPFVSKATGVALAKVAARCMVGQSLESQGVTKEVIPPY 886

Query: 987  VSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVFL 1046
             SVKE VLPF KF G D + GPEMRSTGEVMG+  +F  AFAKAQ+ A   LP  G   L
Sbjct: 887  YSVKEVVLPFAKFPGVDPMRGPEMRSTGEVMGVGENFAEAFAKAQLGASNTLPRGGRALL 946

Query: 1047 SLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVAN 1106
            S+ +  K  +  +AK    IGF++ +T+GTA  LE  GI V RV K+ EGRPH  D + N
Sbjct: 947  SVRNGDKARVVELAKTMKAIGFELDATNGTAKALEEAGIEVRRVNKVFEGRPHILDRIKN 1006

Query: 1107 GQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEA 1153
            G+   +V T+ G    + D   LRR  L +K    TT++ A AN  A
Sbjct: 1007 GEYSYIVNTTEGRQAIE-DSKVLRRGALQHKTNYTTTLNAAFANCTA 1052


>gi|398803854|ref|ZP_10562868.1| carbamoyl-phosphate synthase, large subunit [Polaromonas sp. CF318]
 gi|398095718|gb|EJL86053.1| carbamoyl-phosphate synthase, large subunit [Polaromonas sp. CF318]
          Length = 1076

 Score = 1243 bits (3216), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 641/1077 (59%), Positives = 797/1077 (74%), Gaps = 26/1077 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ +LI+GAGPI+IGQACEFDYSG QACKAL+EEGY+VILINSNPATIMTDP  AD
Sbjct: 3    KRTDIKSVLIIGAGPIIIGQACEFDYSGVQACKALREEGYKVILINSNPATIMTDPATAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+T + VE+++ KERPDA+LPTMGGQTALN A+ L  +G L+KY VELIGAK +A
Sbjct: 63   VTYIEPITWQTVEKIIAKERPDAILPTMGGQTALNCALDLWHNGVLDKYKVELIGAKPEA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  FK AM  IG+ +  SGI +++DE  ++   +G FP +IRP+FTLGGTGGGI
Sbjct: 123  IDKAEDRLKFKDAMTKIGLGSARSGIAHSMDEAWAVQKSVG-FPTVIRPSFTLGGTGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN EEFE ICK GL AS T+++L+E+SLLGWKEYE+EV+RD ADN +I+CSIEN+DPMG
Sbjct: 182  AYNSEEFEVICKRGLEASPTNELLIEESLLGWKEYEMEVVRDTADNCIIVCSIENLDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ LR+ S+A++REIGV+ GGSNVQF++NPVDG ++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQILRNASLAVLREIGVDTGGSNVQFSINPVDGRMVVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ N+IT   TPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGYTLDELRNEITGGATPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            FAFEKFP ++  LTTQMKSVGE MA+GRTFQESFQKALR LE G  G     + E   D 
Sbjct: 362  FAFEKFPAADSRLTTQMKSVGEVMAMGRTFQESFQKALRGLEVGVDG-----MNEKTQDR 416

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
            E L+  L  P PDR+  +  A  +GM VDE+  L+ ID WFL Q ++++ +E  L T S+
Sbjct: 417  EVLEKELGAPGPDRIWYVGDAFAQGMSVDEVFALTKIDPWFLIQIEQIVKIELELETTSL 476

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
              +       +K++GFSD+++A   K+T+  +REKR +LGV P YKRVDTCAAEF  NT 
Sbjct: 477  DKIDAVTLRTLKQKGFSDRRLAKQLKTTDTAIREKRRALGVRPVYKRVDTCAAEFATNTA 536

Query: 627  YMYSSYDF---ECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMM 683
            YMYS+Y+    ECE+APT KKK+++LGGGPNRIGQGIEFDYCC H + +++  GYETIM+
Sbjct: 537  YMYSTYEAEGSECEAAPTDKKKIMVLGGGPNRIGQGIEFDYCCVHAALAMREDGYETIMV 596

Query: 684  NSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLD 743
            N NPETVSTDYDTSDRLYFEPLT+EDVL ++D E+P G+IVQ+GGQTPLKL+L +     
Sbjct: 597  NCNPETVSTDYDTSDRLYFEPLTLEDVLEIVDKEKPLGVIVQYGGQTPLKLALDLE---- 652

Query: 744  EHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAK 803
                  A+G   V I GTSPD IDAAEDRERF  ++ EL + QP    A++E +AL  A 
Sbjct: 653  ------ANG---VPIIGTSPDMIDAAEDRERFQKLLHELKLRQPPNATARTEPEALEKAA 703

Query: 804  EIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDA 863
             +GYP+VVRPSYVLGGRAMEIV+    L  Y+  AV+V  + PVL+D++L+DAIE DVD 
Sbjct: 704  ALGYPLVVRPSYVLGGRAMEIVHEQRDLERYMREAVKVSHDSPVLLDRFLNDAIECDVDC 763

Query: 864  LADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGL 923
            L D  G   IGG+MEHIEQAGVHSGDSAC +P  ++S+  +  I   T  +A+ L V GL
Sbjct: 764  LRDPEGRTFIGGVMEHIEQAGVHSGDSACSLPPYSLSAETVTEIKRQTAAMAEALTVVGL 823

Query: 924  MNCQYAITT--SGDV-YLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTK 980
            MN Q+AI    S DV Y+LE NPRASRTVPFVSKA G  LAK AA  M G+SL   G   
Sbjct: 824  MNVQFAIQNIDSKDVIYVLEVNPRASRTVPFVSKATGIQLAKVAARCMVGQSLASQGIKD 883

Query: 981  EVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPL 1040
            EV P + SVKEAV PF KF G D +LGPEM+STGEVMG+  +F  AF K+Q+ AG KLP 
Sbjct: 884  EVTPPYFSVKEAVFPFVKFPGVDTILGPEMKSTGEVMGVGKTFGEAFVKSQLGAGTKLPT 943

Query: 1041 SGTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHA 1100
            SG VFL++ +  KP    +A+A     F++V+T GTA  ++  GIA   V K+ EGRPH 
Sbjct: 944  SGKVFLTVKNNDKPRAVEVARALAAQKFELVATKGTAAAIQAAGIACTVVNKVTEGRPHV 1003

Query: 1101 GDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSL 1157
             DM+ N +I +++ T         D  ++R   L  +V   TT++GA A  E ++ L
Sbjct: 1004 VDMIKNNEIALVINTVEERRNAITDSRQIRTSALLARVTTYTTIAGAEAAVEGMKYL 1060


>gi|392554494|ref|ZP_10301631.1| carbamoyl phosphate synthase large subunit [Pseudoalteromonas undina
            NCIMB 2128]
          Length = 1072

 Score = 1243 bits (3215), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 620/1077 (57%), Positives = 787/1077 (73%), Gaps = 18/1077 (1%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILILGAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  E+ E+++EKE+PDA+LPTMGGQTALN A+ L + G L K+GVELIGA  DA
Sbjct: 63   ATYIEPIHWEVAEKIIEKEKPDAVLPTMGGQTALNCALDLDKHGVLAKHGVELIGATADA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAE+R+ F  AM+ IG++ P + I +++DE       IG  P IIRP+FT+GGTGGG+
Sbjct: 123  IDKAENRERFDVAMRNIGLECPRAEIAHSMDEARDTMTRIG-LPCIIRPSFTMGGTGGGV 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN EEFE IC+ GL  S TS++L+++SL+GWKEYE+EV+RD  DN +I+CSIEN DPMG
Sbjct: 182  AYNMEEFEEICERGLDLSPTSELLIDESLIGWKEYEMEVVRDKKDNCIIVCSIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGVE GGSNVQF VNPVDG +++IEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQIMRNASMAVLREIGVETGGSNVQFGVNPVDGRMVIIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT  KTPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKIAAKLAVGYTLDELQNDITGGKTPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            F FEKF G+   LTTQMKSVGE MA+GR  QES QKALR LE G +G+      +     
Sbjct: 362  FNFEKFAGANDRLTTQMKSVGEVMAIGRNQQESLQKALRGLEVGATGFNPIVALDDPKAK 421

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
            E++   LR P  +R+  I  AM+ GM V+++ EL+ ID W+L Q ++++  E  +    +
Sbjct: 422  EKIIRELREPGAERIWYIADAMRHGMSVEDVFELTKIDPWYLVQIEDILKDEAKISEVGM 481

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
            + +  D   ++KR+GF+D +IA     +E E+R+KR  L ++P YKRVDTCAAEF ++T 
Sbjct: 482  AGLNADFLRKLKRKGFADPRIAEIAGVSEAEIRKKRHQLNIVPVYKRVDTCAAEFSSDTA 541

Query: 627  YMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSN 686
            YMYSSYD ECE+  + + K++++GGGPNRIGQGIEFDYCC H + +L+  GYETIM+N N
Sbjct: 542  YMYSSYDEECEANASDRDKIMVIGGGPNRIGQGIEFDYCCVHAALALREDGYETIMVNCN 601

Query: 687  PETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHR 746
            PETVSTDYDTSDRLYFEP+T+EDVL ++ +E+P+G+IVQ+GGQTPLKL+          R
Sbjct: 602  PETVSTDYDTSDRLYFEPITLEDVLEIVRVEKPKGVIVQYGGQTPLKLA----------R 651

Query: 747  LPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEIG 806
               A+G   V + GTSPD+ID AEDRERF  +++ L + QP+     S  +AL  + EIG
Sbjct: 652  ELEANG---VPVIGTSPDAIDRAEDRERFQQLVERLDLLQPENATVTSTEEALLKSVEIG 708

Query: 807  YPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALAD 866
            +P+VVRPSYVLGGRAMEIVY ++ L  Y+  AV    E PVL+D++L +AIE+DVDA+ D
Sbjct: 709  FPLVVRPSYVLGGRAMEIVYDEQDLRRYMTEAVSASNEAPVLLDRFLDNAIEVDVDAICD 768

Query: 867  SCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNC 926
                V+IGGIMEHIEQAGVHSGDSAC +P  +++    D +      +A  L V GLMN 
Sbjct: 769  G-EQVIIGGIMEHIEQAGVHSGDSACSLPAHSLTQEVQDVMRKQVTDMALELGVVGLMNT 827

Query: 927  QYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPKH 986
            Q+A+   G VYL+E NPRA+RTVPFVSKA G  LAK AA  M+G+SL   G TKEVIP +
Sbjct: 828  QFAV-KDGKVYLIEVNPRAARTVPFVSKATGVALAKVAARCMAGQSLASQGITKEVIPPY 886

Query: 987  VSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVFL 1046
             SVKE VLPF KFQG D + GPEMRSTGEVMG+  +F  AFAKAQ+ A   LP  G   L
Sbjct: 887  YSVKEVVLPFAKFQGVDPIRGPEMRSTGEVMGVGDTFAEAFAKAQLGASNTLPRGGRALL 946

Query: 1047 SLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVAN 1106
            S+ +  KP +  +AK   D+GF++ +T GTA  LE  GI V RV K++EGRPH  D + N
Sbjct: 947  SVRNSDKPRIVELAKTMTDLGFELDATGGTAAALEDAGITVRRVNKVYEGRPHILDRIKN 1006

Query: 1107 GQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTVT 1163
            G+   +V T+ G    + D   LRR  L +K    TT++ A AN  A ++   + VT
Sbjct: 1007 GEYSYIVNTTEGRQAIE-DSKVLRRGALQHKTNYTTTLNAAFANCTANQADDRSKVT 1062



 Score =  238 bits (608), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 154/422 (36%), Positives = 239/422 (56%), Gaps = 24/422 (5%)

Query: 67  KIDS-SAELSNGAA---SSKDQKL-GKRTDLRKILILGAGPIVIGQACEFDYSGTQACKA 121
           ++D+ +AE S+  A   SS D++     +D  KI+++G GP  IGQ  EFDY    A  A
Sbjct: 528 RVDTCAAEFSSDTAYMYSSYDEECEANASDRDKIMVIGGGPNRIGQGIEFDYCCVHAALA 587

Query: 122 LKEEGYEVILINSNPATIMTDPGLADRTYITPMTPELVEQVLEKERPDALLPTMGGQTAL 181
           L+E+GYE I++N NP T+ TD   +DR Y  P+T E V +++  E+P  ++   GGQT L
Sbjct: 588 LREDGYETIMVNCNPETVSTDYDTSDRLYFEPITLEDVLEIVRVEKPKGVIVQYGGQTPL 647

Query: 182 NLAVALAESGALEKYGVELIGAKLDAIKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECI 241
            LA        LE  GV +IG   DAI +AEDR+ F+Q ++ + +  P +    + +E +
Sbjct: 648 KLA------RELEANGVPVIGTSPDAIDRAEDRERFQQLVERLDLLQPENATVTSTEEAL 701

Query: 242 SIANEIGEFPLIIRPAFTLGGTGGGIAYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKE 301
             + EIG FPL++RP++ LGG    I Y++++        ++AS  + VL+++ L    E
Sbjct: 702 LKSVEIG-FPLVVRPSYVLGGRAMEIVYDEQDLRRYMTEAVSASNEAPVLLDRFLDNAIE 760

Query: 302 YELEVMRDLADNVVIICSIENVDPMGVHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREI 361
            +++ + D  + V+I   +E+++  GVH+GDS    PA +LT +    +R     +  E+
Sbjct: 761 VDVDAICD-GEQVIIGGIMEHIEQAGVHSGDSACSLPAHSLTQEVQDVMRKQVTDMALEL 819

Query: 362 GVECGGSNVQFAVNPVDGEVMVIEMNPRVSRSSALASKATGFPIAKMAAKLSVGYSLDQI 421
           GV  G  N QFAV   DG+V +IE+NPR +R+    SKATG  +AK+AA+   G SL   
Sbjct: 820 GV-VGLMNTQFAVK--DGKVYLIEVNPRAARTVPFVSKATGVALAKVAARCMAGQSL--A 874

Query: 422 PNDITKKTPASFEPSIDYVVTKIPRFAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQ 481
              ITK+    +     Y V ++    F KF G +P+   +M+S GE M +G TF E+F 
Sbjct: 875 SQGITKEVIPPY-----YSVKEVV-LPFAKFQGVDPIRGPEMRSTGEVMGVGDTFAEAFA 928

Query: 482 KA 483
           KA
Sbjct: 929 KA 930


>gi|241663321|ref|YP_002981681.1| carbamoyl phosphate synthase large subunit [Ralstonia pickettii 12D]
 gi|240865348|gb|ACS63009.1| carbamoyl-phosphate synthase, large subunit [Ralstonia pickettii 12D]
          Length = 1081

 Score = 1243 bits (3215), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 624/1084 (57%), Positives = 808/1084 (74%), Gaps = 32/1084 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILI+GAGPI+IGQACEFDYSG QACKAL+EEG++V+L+NSNPATIMTDP  AD
Sbjct: 3    KRTDIKTILIIGAGPIIIGQACEFDYSGAQACKALREEGFKVVLVNSNPATIMTDPNTAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+T E+VE+++ KERPDA+LPTMGGQTALN A+ L   G L+KY VELIGA  +A
Sbjct: 63   VTYIEPITWEVVERIIAKERPDAILPTMGGQTALNCALDLHRHGVLKKYNVELIGASPEA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGE------FPLIIRPAFTLG 261
            I KAEDR  FK AM  IG+ +  SGI +++DE +++ ++I +      +P++IRP+FTLG
Sbjct: 123  IDKAEDRQKFKDAMTKIGLGSAKSGIAHSMDEAVAVQSQIAKETGTSGYPIVIRPSFTLG 182

Query: 262  GTGGGIAYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIE 321
            GTGGGIAYN+EEFE ICK GL  S T+++L+E+SLLGWKEYE+EV+RD ADN +I+CSIE
Sbjct: 183  GTGGGIAYNREEFEEICKRGLDLSPTNELLIEESLLGWKEYEMEVVRDRADNCIIVCSIE 242

Query: 322  NVDPMGVHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEV 381
            N+DPMG+HTGDSITVAPAQTLTDKEYQ LR+ S+A++REIGV+ GGSNVQF++NP DG +
Sbjct: 243  NLDPMGIHTGDSITVAPAQTLTDKEYQILRNASLAVLREIGVDTGGSNVQFSINPQDGRM 302

Query: 382  MVIEMNPRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYV 440
            +VIEMNPRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ N+IT   TPASFEPSIDYV
Sbjct: 303  IVIEMNPRVSRSSALASKATGFPIAKVAAKLAVGYTLDELKNEITGGATPASFEPSIDYV 362

Query: 441  VTKIPRFAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVK 500
            VTK+PRFAFEKFP ++  LTTQMKSVGE MA+GRTFQESFQKALR LE G  G     + 
Sbjct: 363  VTKVPRFAFEKFPQADSHLTTQMKSVGEVMAMGRTFQESFQKALRGLEVGVDG-----LD 417

Query: 501  ELDWDWEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQF 560
            E   D +++   +    PDR+  +  A + G+ +DE++  + +D WFL Q ++++  E  
Sbjct: 418  EKSTDRDEIIEEIGEAGPDRIWYLGDAFRLGLSIDEVYAETSVDPWFLAQIEDIVKTEAL 477

Query: 561  LLTQSVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAE 620
            + ++++ +++  +   +K++GFSD+++A  TK+T K VREKR++  V P YKRVDTCAAE
Sbjct: 478  VKSRTLESLSAAELRLLKQKGFSDRRLAKLTKTTAKAVREKRIAENVRPVYKRVDTCAAE 537

Query: 621  FEANTPYMYSSYDF---ECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAG 677
            F  NT Y+YS+Y+    ECE+ PT  KK+++LGGGPNRIGQGIEFDYCC H + +L+  G
Sbjct: 538  FATNTAYLYSTYEAEHGECEAEPTGNKKIMVLGGGPNRIGQGIEFDYCCVHAALALREDG 597

Query: 678  YETIMMNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLP 737
            YETIM+N NPETVSTDYDTSDRLYFEP+T+EDVL ++D E+P G+IVQ+GGQTPLKL+L 
Sbjct: 598  YETIMVNCNPETVSTDYDTSDRLYFEPVTLEDVLEIVDKEKPVGLIVQYGGQTPLKLALD 657

Query: 738  IHQYLDEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEAD 797
            +           A+G   V I GTSPD IDAAEDRERF  ++ EL + QP    A++E +
Sbjct: 658  LE----------ANG---VPIIGTSPDMIDAAEDRERFQKLLHELGLRQPPNRTARAEDE 704

Query: 798  ALAIAKEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAI 857
            AL +A+EIGYP+VVRPSYVLGGRAMEIV+    L  Y+  AV+V  + PVL+D++L+DAI
Sbjct: 705  ALKLAEEIGYPLVVRPSYVLGGRAMEIVHEPRDLERYMREAVKVSNDSPVLLDRFLNDAI 764

Query: 858  EIDVDALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKR 917
            E DVD L+D    V IGG+MEHIEQAGVHSGDSAC +P  ++S + +D +   T  +AK 
Sbjct: 765  ECDVDCLSDG-KRVFIGGVMEHIEQAGVHSGDSACSLPPYSLSQATVDELKRQTAAMAKA 823

Query: 918  LNVCGLMNCQYAITTSGD---VYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLN 974
            LNV GLMN Q+AI   G    VY+LE NPRASRTVP+VSKA G PLAK AA  M+G+SL 
Sbjct: 824  LNVIGLMNVQFAIQQKGGEDIVYVLEVNPRASRTVPYVSKATGVPLAKVAARCMAGQSLE 883

Query: 975  DLGFTKEVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAA 1034
              G   EV+P + SVKEAV PF KF G D +LGPEMRSTGEVMG+  +F  A  K+Q+AA
Sbjct: 884  SQGVETEVVPAYYSVKEAVFPFNKFPGVDPVLGPEMRSTGEVMGVGKTFGEALFKSQLAA 943

Query: 1035 GQKLPLSGTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMH 1094
            G +LP  GTV +++ D  KP    +A+A   +G+ IV+T GTA  +E  GI V  V K+ 
Sbjct: 944  GSRLPEKGTVLMTVKDSDKPQAVEVARALHTLGYPIVATRGTASAIEAAGIPVRVVNKVK 1003

Query: 1095 EGRPHAGDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAI 1154
            +GRPH  DM+ N +I ++  T         D   +R+  LA +V   TT++GA A  E +
Sbjct: 1004 DGRPHIVDMIKNSEIALVFTTVDETRAAIADSRSIRQAALAQRVTYYTTIAGARAAVEGL 1063

Query: 1155 RSLK 1158
            + ++
Sbjct: 1064 KHMQ 1067


>gi|326387387|ref|ZP_08208996.1| carbamoyl phosphate synthase large subunit [Novosphingobium
            nitrogenifigens DSM 19370]
 gi|326208043|gb|EGD58851.1| carbamoyl phosphate synthase large subunit [Novosphingobium
            nitrogenifigens DSM 19370]
          Length = 1104

 Score = 1243 bits (3215), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 637/1122 (56%), Positives = 816/1122 (72%), Gaps = 59/1122 (5%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD+  ILI+GAGPIVIGQACEFDYSGTQA KALKEEGY ++L+NSNPATIMTDP +AD
Sbjct: 3    KRTDISSILIIGAGPIVIGQACEFDYSGTQAIKALKEEGYRIVLVNSNPATIMTDPEMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TY+ P+TPE+V +++EKERPDALLPTMGGQTALN A+AL   G L+K+GV +IGA  +A
Sbjct: 63   ATYVEPITPEIVAKIIEKERPDALLPTMGGQTALNTALALFRDGTLDKFGVTMIGANAEA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  F+ AM  IG+++  SG+ +T++E +++    G  P IIRP+FTLGGTGGGI
Sbjct: 123  IDKAEDRQKFRDAMDKIGLESARSGVAHTVEEALAVLEHTG-LPSIIRPSFTLGGTGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYNK+EF  I + GL AS T++VL+E+SLLGWKEYE+EV+RD  DN +IICSIENVDPMG
Sbjct: 182  AYNKDEFIRIVRGGLEASPTTEVLIEESLLGWKEYEMEVVRDRNDNCIIICSIENVDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPA TLTDKEYQ +R  SIA++REIGVE GGSNVQFAVNP DG ++VIEMN
Sbjct: 242  VHTGDSITVAPALTLTDKEYQIMRSASIAVLREIGVETGGSNVQFAVNPKDGRLIVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRF 447
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD+I NDIT  TPA+FEP+IDYVVTKIPRF
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGYTLDEITNDITGATPAAFEPTIDYVVTKIPRF 361

Query: 448  AFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDW-DW 506
            AFEKF GSEPLL+T MKSVGE MA+GR  +ES QKALR LE G  G+  + V EL+    
Sbjct: 362  AFEKFKGSEPLLSTAMKSVGEVMAIGRNLKESMQKALRGLETGLDGF--NRVDELEGASR 419

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
            +++  +L    PDR+  I  A ++G  V+++H ++  + WFL    E++  E+ ++   +
Sbjct: 420  DEINAALSRATPDRLLVIGQAFREGFTVEDVHAVTKYEPWFLRHIAEIVAEEEKVIEHGL 479

Query: 567  SNMTKDDFYEVKRRGFSDKQI---------------------------AFATKSTEKEVR 599
                      +K  GFSDK++                           A A  ++E EVR
Sbjct: 480  PR-DATGLRRLKAMGFSDKRLAKLAVRSARLAGSANMARAGLVHDVVEAMAGATSEAEVR 538

Query: 600  EKRLSLGVIPSYKRVDTCAAEFEANTPYMYSSYDF------ECESAPTQKKKVLILGGGP 653
            + R  LGV P +KR+D+CAAEFEA TPYMYS+Y+       E ES P+ ++K++ILGGGP
Sbjct: 539  KLRHKLGVRPVFKRIDSCAAEFEAITPYMYSTYEGGLFGAPEGESMPSDRRKIVILGGGP 598

Query: 654  NRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSNPETVSTDYDTSDRLYFEPLTVEDVLNV 713
            NRIGQGIEFDYCCCH  F+L+ AG+ETIM+N NPETVSTDYDTSDRLYFEPLT EDVL +
Sbjct: 599  NRIGQGIEFDYCCCHACFALEDAGFETIMINCNPETVSTDYDTSDRLYFEPLTGEDVLEI 658

Query: 714  IDLERPE----GIIVQFGGQTPLKLSLPIHQYLDEHRLPSASGDGLVRIWGTSPDSIDAA 769
            +++ER +    G+IVQFGGQTPLKL+    Q L    +P         I GTSPDSID A
Sbjct: 659  LEVERSKGELVGVIVQFGGQTPLKLA----QALQNAGIP---------ILGTSPDSIDLA 705

Query: 770  EDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEIGYPVVVRPSYVLGGRAMEIVYTDE 829
            EDRERF  ++++L + QP  G+A+S  +A+A+A  IGYPV++RPSYVLGGRAMEIV +  
Sbjct: 706  EDRERFADLVEKLKLLQPANGLARSRDEAVAVAARIGYPVLIRPSYVLGGRAMEIVDSQA 765

Query: 830  TLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALADSCGNVVIGGIMEHIEQAGVHSGD 889
             L  Y+  AV+V  E PVLID+YL DA+E DVDAL+D   +VVI G+++HIE+AG+HSGD
Sbjct: 766  QLDDYIATAVKVSGESPVLIDQYLRDAVECDVDALSDGT-DVVIAGVLQHIEEAGIHSGD 824

Query: 890  SACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNCQYAITTSGDVYLLEANPRASRTV 949
            SAC +P  ++    +  +    + LAK LNV GLMN Q+A+   G+VYL+E NPRASRTV
Sbjct: 825  SACTLPPYSLPPEIIAEMERQAVLLAKGLNVRGLMNIQFAV-KDGNVYLIEVNPRASRTV 883

Query: 950  PFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPKHVSVKEAVLPFEKFQGCDVLLGPE 1009
            PFV+KAIG P+AKYAA +M+G+ L DL   +  I  +++VKEAV PF +F G D +L PE
Sbjct: 884  PFVAKAIGQPIAKYAARIMAGEKLADLPPIRRDI-DYMAVKEAVFPFARFPGVDPVLSPE 942

Query: 1010 MRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVFLSLNDLTKPHLERIAKAFLDIGFK 1069
            M+STGEVMGID +FPIAFAK+Q+ AG +LP  GT+F+S+ D  KP +    +    +GFK
Sbjct: 943  MKSTGEVMGIDANFPIAFAKSQLGAGTRLPSEGTLFVSVKDTDKPVVLPAVRKLAGLGFK 1002

Query: 1070 IVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVANGQIQMMVITSSGDSLDQIDGLKL 1129
            +V+T GTA FLE +GIAVERV K+ EGRPH  D++ +G I ++  T+ G    + D   +
Sbjct: 1003 VVATGGTARFLEAEGIAVERVNKVAEGRPHIVDLIIDGGIDLIFNTTEGWQSHK-DSQSI 1061

Query: 1130 RRRGLAYKVPVITTVSGALANAEAIRSLKSNTVTMTALQDFF 1171
            RR  L  KV   TT + ++A AEAI  L+S  + + +LQD++
Sbjct: 1062 RRSALTGKVCYFTTAAASVAAAEAIEELRSAELDVRSLQDYY 1103


>gi|334144143|ref|YP_004537299.1| carbamoyl-phosphate synthase large subunit [Thioalkalimicrobium
            cyclicum ALM1]
 gi|333965054|gb|AEG31820.1| carbamoyl-phosphate synthase, large subunit [Thioalkalimicrobium
            cyclicum ALM1]
          Length = 1071

 Score = 1242 bits (3214), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 636/1088 (58%), Positives = 808/1088 (74%), Gaps = 25/1088 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILI+GAGPI+IGQACEFDYSG QACKALKEEGY V+L+NSNPATIM+DP LA 
Sbjct: 3    KRTDIKTILIIGAGPIIIGQACEFDYSGAQACKALKEEGYRVVLVNSNPATIMSDPDLAH 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+T ++VE+++ KERPDA+LPTMGGQTALN A+ LA +G L+KY VELIGA  DA
Sbjct: 63   ATYIEPITWQVVEKIIAKERPDAILPTMGGQTALNCALDLAHNGVLKKYHVELIGASEDA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAE+RD F++AM  IG+  P S + + LDE   I  ++G FP +IRP+FTLGG+GGGI
Sbjct: 123  IDKAENRDRFRKAMTKIGLDMPYSEVAHNLDEAWQIQAKVG-FPTVIRPSFTLGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEFE ICK GL  S T ++L+E+S+LGWKE+E+EV+RD  DN +I+CSIEN DPMG
Sbjct: 182  AYNREEFEQICKFGLDLSPTKELLIEESILGWKEFEMEVIRDKKDNCIIVCSIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGVE GGSNVQFA+NP  G ++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQIMRNASLAVLREIGVETGGSNVQFALNPESGRMIVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITK-KTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT   TPASFEPSIDYVVTK+PR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGYTLDELKNDITNGATPASFEPSIDYVVTKLPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWG----CSNVKEL 502
            F FEKFP ++  L+TQMKSVGE MA+GR F+ES QKALR LE G  G       +   E 
Sbjct: 362  FTFEKFPQAQARLSTQMKSVGEVMAMGRNFKESLQKALRGLETGMDGLNEMIDLATTDEK 421

Query: 503  DWDWEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLL 562
            D   + L+  LR P PDR+  +  A + G  V+++ E+S ID WFL Q +EL++ E+ ++
Sbjct: 422  DV-RDILRRELRDPGPDRIWYVADAFRAGWIVEQVFEVSKIDPWFLAQIEELVESERQMM 480

Query: 563  TQSVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFE 622
             + +  +  D   ++KR+GFSD +IA   K+    VR+ R +LG+ P YKRVDTCAAEF 
Sbjct: 481  AKGLDALEADFLKQLKRQGFSDNRIAALLKTDSALVRKYRHTLGIRPVYKRVDTCAAEFA 540

Query: 623  ANTPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIM 682
             +T Y+YS+Y+ ECE+ PT + K+++LGGGPNRIGQGIEFDYCC H + +L   GYETIM
Sbjct: 541  TSTAYLYSTYEEECEAQPTDRNKIMVLGGGPNRIGQGIEFDYCCVHAAMALSEDGYETIM 600

Query: 683  MNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYL 742
            +N NPETVSTDYDTSDRLYFEPLT+EDVL ++ +E+P+G+IVQ+GGQTPLKL+       
Sbjct: 601  VNCNPETVSTDYDTSDRLYFEPLTLEDVLEIVAIEKPKGVIVQYGGQTPLKLA------- 653

Query: 743  DEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIA 802
               R   A+G   V I GTSPDSID AEDRERF  ++ +L++ QP    A+ E +A+ +A
Sbjct: 654  ---RDLEAAG---VPIIGTSPDSIDLAEDRERFQQLLNKLNLRQPPNRTARREDEAVTLA 707

Query: 803  KEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVD 862
            KEIGYP+VVRPSYVLGGRAMEIVY++E L+ Y++ AV+V  + PVL+D++L DA+E+DVD
Sbjct: 708  KEIGYPLVVRPSYVLGGRAMEIVYSEEDLLRYMKFAVKVSNDSPVLLDRFLDDAVELDVD 767

Query: 863  ALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCG 922
            A+ D    VVIGG+MEHIEQAG+HSGDSAC +P  +I  S  D I +   ++AK L+V G
Sbjct: 768  AICDG-EQVVIGGLMEHIEQAGIHSGDSACSLPPYSIKKSVQDEIRNQVEQMAKALDVVG 826

Query: 923  LMNCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEV 982
            LMN Q+A+    D+Y+LE NPRASRTVPFVSKAIG PLAK AA  M G+SL + GFT E+
Sbjct: 827  LMNTQFAV-KGDDIYVLEVNPRASRTVPFVSKAIGRPLAKIAARCMVGQSLAEQGFTTEI 885

Query: 983  IPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSG 1042
            +PKH SVKEAV PF KF G D +LGPEM+STGEVMG+  +FP A+A AQ+AA   LP  G
Sbjct: 886  MPKHYSVKEAVFPFIKFLGVDPILGPEMKSTGEVMGVGANFPQAYANAQLAASTILPREG 945

Query: 1043 TVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGD 1102
              FLS+    +  +  +AK     GF++V+T GTA  L+  GI  E V K+ EGRP+  D
Sbjct: 946  KAFLSVRKADRVKVIDLAKQLQAKGFRVVATRGTATSLQEAGIECELVNKVAEGRPNIVD 1005

Query: 1103 MVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTV 1162
             + N +IQ++V TS G S+   D   +RR  L +KV   TT++GA A   A+  L    V
Sbjct: 1006 AIKNEEIQLIVNTSDG-SVSIKDSSGIRREALMHKVCYTTTMAGAFATVAAMDYLDDQPV 1064

Query: 1163 TMTALQDF 1170
                LQD 
Sbjct: 1065 HR--LQDL 1070


>gi|119478512|ref|ZP_01618474.1| carbamoyl-phosphate synthase large subunit [marine gamma
            proteobacterium HTCC2143]
 gi|119448493|gb|EAW29741.1| carbamoyl-phosphate synthase large subunit [marine gamma
            proteobacterium HTCC2143]
          Length = 1075

 Score = 1242 bits (3214), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 620/1087 (57%), Positives = 802/1087 (73%), Gaps = 26/1087 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILILGAGPIVIGQACEFDYSG QACKAL+EEG  VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGIRVILVNSNPATIMTDPAMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  + V +++E E+PDALLPTMGGQTALN A+ L   G LEK+GVE+IGA  +A
Sbjct: 63   ATYIEPVEWQTVARIIEVEKPDALLPTMGGQTALNCALDLDRHGVLEKHGVEMIGASKEA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDRDLF +AMK IG++ P S I ++++E   + +++G FP IIRP+FT+GG+GGGI
Sbjct: 123  IDKAEDRDLFDKAMKRIGLECPRSAIAHSMEEAFQVQSQLG-FPCIIRPSFTMGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYNKEEF  IC+ GL  S TS++L+++SL+GWKEYE+EV+RD  DN +I+CSIEN DPMG
Sbjct: 182  AYNKEEFAEICERGLDLSPTSELLIDESLIGWKEYEMEVVRDKNDNCIIVCSIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGVE GGSNVQF   P  G  ++IEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQIMRNASLAVLREIGVETGGSNVQFGQCPDTGRFVIIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITK-KTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIA++AAKL++GY+LD++ NDIT   TPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIARIAAKLAIGYTLDELQNDITGGATPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            F FEKF  ++  L TQMKSVGE MA+GRTFQES QKALR LE G SG+      ++D D 
Sbjct: 362  FTFEKFAEADSHLHTQMKSVGEVMAIGRTFQESIQKALRGLEVGSSGFE----HQIDTDR 417

Query: 507  EQ----LKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLL 562
                  L   L  P P+R+  +  A++ GM +DE+++ S ID+W+L Q ++++  E  L 
Sbjct: 418  SDARDILISELTNPGPERIWYVADALRSGMSIDEVYDFSKIDRWYLAQIEDIVLSENALK 477

Query: 563  TQSVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFE 622
            TQ ++++  +  + +KR+GFSDK++A      E+ VRE R  LG+ P YKRVDTCAAEF 
Sbjct: 478  TQYLADLDANSIFRLKRKGFSDKRLAVLLNEEERAVREHRHVLGIHPVYKRVDTCAAEFA 537

Query: 623  ANTPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIM 682
             +T YMYS+Y+ ECE+  + K+K+LILGGGPNRIGQGIEFDYCC H + +++  GYETIM
Sbjct: 538  TSTAYMYSTYEEECEANVSNKEKILILGGGPNRIGQGIEFDYCCVHAALAMREDGYETIM 597

Query: 683  MNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYL 742
            +N NPETVSTDYDTSDRLYFEP+T+EDVL ++  E+P+G+IVQFGGQTPLKL+       
Sbjct: 598  VNCNPETVSTDYDTSDRLYFEPVTLEDVLEIVHKEKPKGVIVQFGGQTPLKLA------- 650

Query: 743  DEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIA 802
               R   A+G   V I GT+PD+ID AEDRERF  +I++L ++QP     +S  +A+A A
Sbjct: 651  ---RELEAAG---VPIIGTTPDAIDRAEDRERFQHMIQKLGLKQPPNTTVRSTDEAIAAA 704

Query: 803  KEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVD 862
              IGYP+VVRPSYVLGGRAMEIVY ++ L+ Y++ AV+   E PVL+D +L+ A+E+DVD
Sbjct: 705  ASIGYPLVVRPSYVLGGRAMEIVYDEDELLRYMKEAVQASNESPVLLDHFLNAAVEMDVD 764

Query: 863  ALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCG 922
            A++D   +VVIG IM+HIEQAG+HSGDSAC +P  ++S++  D +      +A  L VCG
Sbjct: 765  AVSDG-KDVVIGAIMQHIEQAGIHSGDSACSLPPYSLSAAQQDKMREQVKIMAIELGVCG 823

Query: 923  LMNCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEV 982
            LMN Q A    G+++++E NPRASRTVPFVSK IG  LAK AA  M+G SL + GFT E 
Sbjct: 824  LMNVQLA-EQDGEIFIIEVNPRASRTVPFVSKCIGVSLAKIAARCMAGTSLKEQGFTTER 882

Query: 983  IPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSG 1042
            IP + SVKEAV PF KF   D +LGPEM+STGEVMG+  +F  A+AKAQ+ AG+KLP SG
Sbjct: 883  IPPYYSVKEAVFPFNKFPAVDPILGPEMKSTGEVMGLGDTFAEAYAKAQLGAGEKLPTSG 942

Query: 1043 TVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGD 1102
              F+S+ D  K  +  +A+  LD+GF++V+T GT   +   G++   V K+ EGRPH  D
Sbjct: 943  KAFVSVRDADKTGVVAVARKLLDLGFELVATRGTYKVITDAGMSAVMVNKVKEGRPHTVD 1002

Query: 1103 MVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTV 1162
            ++ N +I ++V T+ G      D   +RR  LA KV   TT++GA A  EAI+  K+ T 
Sbjct: 1003 LLKNDEIALIVNTTEGRR-SIADSSAIRRTALAKKVFCTTTLAGADAVCEAIKEGKNKTR 1061

Query: 1163 TMTALQD 1169
             +  LQD
Sbjct: 1062 EVRRLQD 1068


>gi|198282925|ref|YP_002219246.1| carbamoyl-phosphate synthase large subunit [Acidithiobacillus
            ferrooxidans ATCC 53993]
 gi|218666972|ref|YP_002425128.1| carbamoyl-phosphate synthase large subunit [Acidithiobacillus
            ferrooxidans ATCC 23270]
 gi|198247446|gb|ACH83039.1| carbamoyl-phosphate synthase, large subunit [Acidithiobacillus
            ferrooxidans ATCC 53993]
 gi|218519185|gb|ACK79771.1| carbamoyl-phosphate synthase, large subunit [Acidithiobacillus
            ferrooxidans ATCC 23270]
          Length = 1079

 Score = 1242 bits (3214), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 621/1090 (56%), Positives = 803/1090 (73%), Gaps = 16/1090 (1%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            K  D++ +L++GAGPI+IGQACEFDYSG QACKAL+EEG  VIL+NSNPATIMTD   AD
Sbjct: 3    KHQDIKSVLLIGAGPIIIGQACEFDYSGVQACKALREEGCRVILVNSNPATIMTDAQTAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  + V +++  ERPDA+LPTMGGQTALN A+ L   G LE+YGV+LIGA ++A
Sbjct: 63   ATYIEPVEWQTVARIIAMERPDAILPTMGGQTALNCALDLHREGVLEQYGVKLIGASVEA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I++AEDR LFK+AM+ IG++   S  G+ ++    IA +IG FP+IIRP+FTLGGTGGGI
Sbjct: 123  IREAEDRGLFKKAMEEIGLEVARSAFGHDMEGARQIAEDIG-FPVIIRPSFTLGGTGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEFE I   GL AS T ++L+E+S++GWKE+E+EV+RD ADN +I+CSIEN DPMG
Sbjct: 182  AYNREEFEDIAARGLEASPTHEILIEESIIGWKEFEMEVVRDRADNCIIVCSIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            +HTGDSITVAPAQTLTD+EYQR+RD SIA++R IGV+ GGSNVQFAVNP DG ++VIEMN
Sbjct: 242  IHTGDSITVAPAQTLTDREYQRMRDASIAVLRRIGVDTGGSNVQFAVNPEDGRLIVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRF 447
            PRVSRSSALASKATGFPIAK+AAKL++GY+LD++ NDIT+ TPASFEP+IDYVVTKIPRF
Sbjct: 302  PRVSRSSALASKATGFPIAKIAAKLALGYTLDELRNDITQATPASFEPTIDYVVTKIPRF 361

Query: 448  AFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDWE 507
            AFEKFP ++  LTTQMKSVGE MA+GR+FQES QKALR LE G  G     +       +
Sbjct: 362  AFEKFPEADAHLTTQMKSVGEVMAIGRSFQESLQKALRGLETGVDGLDEKLIGNDPDTLQ 421

Query: 508  QLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSVS 567
            +L+  LRVP  DR+  +  A+++G   D +  ++ ID WFL Q  E+I  E+ L   S++
Sbjct: 422  KLEQELRVPGADRLWYLADAVRRGWDQDSLQRITRIDPWFLEQIFEIIQTEESLRGLSLA 481

Query: 568  NMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTPY 627
             +       +K  GFSD++++      E+++RE+R  LGV P YKRVDTCAAEF + TPY
Sbjct: 482  GLDDARLRTLKGMGFSDRRLSRLLGCHEQQLREQRQRLGVRPVYKRVDTCAAEFRSPTPY 541

Query: 628  MYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSNP 687
            +YS+Y+ ECE+ P  K K++ILGGGPNRIGQGIEFDYCC H + +LQ  G+ETIM+N NP
Sbjct: 542  LYSTYETECEAEPGVKPKIMILGGGPNRIGQGIEFDYCCVHAAMALQEDGFETIMVNCNP 601

Query: 688  ETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHRL 747
            ETVSTDYDTSDRLYFEPLT+EDVL ++ +E+P G+IVQFGGQTPLKL+  +         
Sbjct: 602  ETVSTDYDTSDRLYFEPLTLEDVLEIVAVEKPHGVIVQFGGQTPLKLANDLE-------- 653

Query: 748  PSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEIGY 807
              A+G   V I GT+PDSID AEDRERF  +++ L + QP+  IA+S  +AL+ A+ +GY
Sbjct: 654  --AAG---VPIIGTTPDSIDLAEDRERFQQLLQRLDLRQPENAIARSAPEALSKARALGY 708

Query: 808  PVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALADS 867
            P+VVRPSYVLGGRAM IVY ++ L  Y+  AV +  ++P+L+D++L+DA+E+DVDA+ADS
Sbjct: 709  PLVVRPSYVLGGRAMRIVYGEDDLQRYMLEAVRISNDQPILLDRFLNDALEVDVDAVADS 768

Query: 868  CGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNCQ 927
               V++ GIMEHIEQAGVHSGDSAC +P  ++S +  D I   T++LA  L V GLMNCQ
Sbjct: 769  GQQVIVAGIMEHIEQAGVHSGDSACCLPPYSLSPAIQDEIRRQTVELALALGVVGLMNCQ 828

Query: 928  YAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPKHV 987
            +A+     +Y+LE NPRASRTVPFVSKA G PLAK A+  M+GKSL   G  +   P H 
Sbjct: 829  FAVQNE-RIYVLEVNPRASRTVPFVSKATGWPLAKIASRCMTGKSLAAQGVPQIPNPPHF 887

Query: 988  SVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVFLS 1047
            SVKEAV PF KF G D+LLGPEM+STGEVMGI  SF  AF KAQ+ AG+  P SGTVFLS
Sbjct: 888  SVKEAVFPFIKFPGVDILLGPEMKSTGEVMGIGASFGEAFLKAQVGAGEHFPSSGTVFLS 947

Query: 1048 LNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVANG 1107
            + D  K  L   A+   ++GFK+++T GTA FL+ +G+ V  V K+ EGRPH  D + NG
Sbjct: 948  VRDADKKGLTPTARILSELGFKLIATGGTAAFLQKEGLEVAPVNKVTEGRPHIVDAIKNG 1007

Query: 1108 QIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTVTMTAL 1167
            ++Q ++I +  +     D   +RR  L   +   TT++GA A A AI +L +   ++  L
Sbjct: 1008 KVQ-IIINTVDERQSVRDSFSIRRAALQMGLTYYTTLAGATAGAAAIHALMTEECSVLRL 1066

Query: 1168 QDFFDVETAS 1177
            QD     T++
Sbjct: 1067 QDLNQKSTST 1076


>gi|437999837|ref|YP_007183570.1| carbamoyl-phosphate synthase large chain [Candidatus
            Kinetoplastibacterium blastocrithidii (ex Strigomonas
            culicis)]
 gi|451812740|ref|YP_007449193.1| carbamoyl-phosphate synthase large subunit [Candidatus
            Kinetoplastibacterium blastocrithidii TCC012E]
 gi|429339071|gb|AFZ83493.1| carbamoyl-phosphate synthase large chain [Candidatus
            Kinetoplastibacterium blastocrithidii (ex Strigomonas
            culicis)]
 gi|451778709|gb|AGF49589.1| carbamoyl-phosphate synthase large subunit [Candidatus
            Kinetoplastibacterium blastocrithidii TCC012E]
          Length = 1079

 Score = 1242 bits (3214), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 633/1079 (58%), Positives = 802/1079 (74%), Gaps = 27/1079 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTDL+ ILI+GAGPI+IGQACEFDYSG QACKALK EGY  IL+NSNPATIMTDP  AD
Sbjct: 3    KRTDLKSILIIGAGPIIIGQACEFDYSGAQACKALKSEGYRTILVNSNPATIMTDPETAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  + VE+++EKE+PDA+LPTMGGQTALN A+ L   G L+K+ V+LIGA   A
Sbjct: 63   VTYIEPVIWQAVEKIIEKEKPDAILPTMGGQTALNCALDLVRHGVLDKHNVQLIGANAHA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGE------FPLIIRPAFTLG 261
            I+KAEDR  FKQAM  IG+++  SG+ ++++E  S+  +I        FP++IRP+FT+G
Sbjct: 123  IEKAEDRQKFKQAMNDIGLESARSGLAHSMEEAWSVQKDIAASNDSFGFPVVIRPSFTMG 182

Query: 262  GTGGGIAYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIE 321
            G+GGGIAYN +EFE ICK GL AS TS++L+E+SLLGWKE+E+EV+RD ADN +I+CSIE
Sbjct: 183  GSGGGIAYNSDEFEDICKRGLEASPTSELLIEESLLGWKEFEMEVIRDKADNCIIVCSIE 242

Query: 322  NVDPMGVHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEV 381
            N+DPMGVHTGDSITVAPAQTLTDKEYQ +R  SIA++REIGV+ GGSNVQFAVNP +G +
Sbjct: 243  NLDPMGVHTGDSITVAPAQTLTDKEYQIMRSASIAVLREIGVDTGGSNVQFAVNPNNGRM 302

Query: 382  MVIEMNPRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKK-TPASFEPSIDYV 440
            +VIEMNPRVSRSSALASKATGFPIAK+AA L+VG++LD++ NDIT K TPASFEPSIDYV
Sbjct: 303  VVIEMNPRVSRSSALASKATGFPIAKVAALLAVGFTLDELKNDITGKLTPASFEPSIDYV 362

Query: 441  VTKIPRFAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVK 500
            VTK+PRFAFEKFP ++  LTTQMKSVGE MA+GRTFQESFQKALR LE G  G     + 
Sbjct: 363  VTKVPRFAFEKFPTADSRLTTQMKSVGEVMAIGRTFQESFQKALRGLEVGVDGLNQKTI- 421

Query: 501  ELDWDWEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQF 560
                D E L+  L  P P+R+  +  A  K   ++E++ L+ ID WFL+Q KE++D+E  
Sbjct: 422  ----DRETLEVELGAPGPERIWYVGDAFAKKFTIEEVYALTKIDVWFLSQIKEIVDIELA 477

Query: 561  LLTQSVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAE 620
            L  +++S++  D   E+KR GFSD ++AF   S+E EVR+ R S  + P YKRVDTCAAE
Sbjct: 478  LEKKTLSDIDYDTLLELKRHGFSDARLAFLLDSSELEVRKLRHSFNIRPVYKRVDTCAAE 537

Query: 621  FEANTPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYET 680
            F  NT YMYS+Y+ ECES P+ KKK++ILGGGPNRIGQGIEFDYCC H S +L+  GYET
Sbjct: 538  FHTNTAYMYSTYEEECESNPSNKKKIIILGGGPNRIGQGIEFDYCCVHASLALREHGYET 597

Query: 681  IMMNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQ 740
            IM+N NPETVSTDYDTSDRLYFEPLT+EDVL ++  E+P G IVQ+GGQTPLKL+     
Sbjct: 598  IMVNCNPETVSTDYDTSDRLYFEPLTLEDVLEIVYKEKPIGTIVQYGGQTPLKLA----- 652

Query: 741  YLDEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALA 800
                 R   A+G   V I GTSP+SID AEDRERF  ++ ++ + QP    A++E +ALA
Sbjct: 653  -----RALEANG---VPIIGTSPESIDIAEDRERFQKLLAKIGLRQPSNRTARTEVEALA 704

Query: 801  IAKEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEID 860
            +A EIGYP+VVRPSYVLGGRAMEIV+  + L  Y+  AV+V  + PVL+D +L++A E+D
Sbjct: 705  LASEIGYPLVVRPSYVLGGRAMEIVHEQKDLERYMREAVKVSNDSPVLLDSFLNNATEVD 764

Query: 861  VDALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNV 920
            VD L+D   +V +GG+MEHIEQAGVHSGDSAC IP  ++SS  +D I   T  +A+ LNV
Sbjct: 765  VDCLSDG-EDVFVGGVMEHIEQAGVHSGDSACSIPPYSLSSDIVDEIKRQTRLIARSLNV 823

Query: 921  CGLMNCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTK 980
             GLMN Q+A+   GD+Y+LE NPRASRT+P+VSKA G  LAK AALVMSG SL+    ++
Sbjct: 824  KGLMNTQFAV-QDGDIYVLEVNPRASRTIPYVSKATGLQLAKVAALVMSGISLSSQNISE 882

Query: 981  EVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPL 1040
            E    + SVKEAV PF KF G D +LGPEM+STGEVMGI  +F  AF KAQ+ AG +LP 
Sbjct: 883  ESKSSYFSVKEAVFPFSKFPGVDTILGPEMKSTGEVMGIGKTFAEAFVKAQLGAGVRLPE 942

Query: 1041 SGTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHA 1100
            +GTVF+S+ D  K     +AK    +GF +V+T GTA  L   G+ V  V K++EGRP+ 
Sbjct: 943  TGTVFISVKDQDKLLAIDVAKGLQSLGFHLVATKGTAAKLMSAGVKVREVNKVNEGRPNI 1002

Query: 1101 GDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKS 1159
             DM+ NG+I ++V T        +D   +R + LA  V   TT++GA A  + ++ L++
Sbjct: 1003 VDMIRNGEIALVVNTVEERRNAIVDSKTIRVQSLANHVVCFTTIAGARAAVDGMQYLRN 1061


>gi|329893939|ref|ZP_08269974.1| Carbamoyl-phosphate synthase large chain [gamma proteobacterium
            IMCC3088]
 gi|328923394|gb|EGG30711.1| Carbamoyl-phosphate synthase large chain [gamma proteobacterium
            IMCC3088]
          Length = 1073

 Score = 1242 bits (3214), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 620/1067 (58%), Positives = 785/1067 (73%), Gaps = 26/1067 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD+  ILILGAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDISSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPSMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  E V +++E ERPDALLPTMGGQTALN A+ L + G L+K+GVE+IGA  +A
Sbjct: 63   ATYIEPIEWETVSKIIEAERPDALLPTMGGQTALNCALDLDKHGVLKKFGVEMIGATKEA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR LF  AMK IG++TP +    +++   +I  +IG  P IIRP+FT+GG+GGGI
Sbjct: 123  IDKAEDRQLFDDAMKRIGLETPRAATARSMEHAFAILEDIG-LPCIIRPSFTMGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEFE IC  G   S T ++L+++SL+GWKEYE+EV+RD  DN +I+CSIEN D MG
Sbjct: 182  AYNREEFEEICIRGFDLSPTHELLIDESLIGWKEYEMEVVRDKNDNCIIVCSIENFDAMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKE Q +RD S+A++REIGVE GGSNVQF  +P  G  ++IEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEMQIMRDASLAVLREIGVETGGSNVQFGQDPKTGRFVIIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITK-KTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL++GY+LD++ NDIT   TPASFEP+IDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAIGYTLDELQNDITGGATPASFEPAIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGW----GCSNVKEL 502
            FAFEKF  +   LTTQMKSVGE MA+GRTFQES QKA+R LE G +G+      SN    
Sbjct: 362  FAFEKFDTANSRLTTQMKSVGEVMAIGRTFQESMQKAMRGLEVGSAGFEHKMDVSNPDTR 421

Query: 503  DWDWEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLL 562
            D    +L   L  P PDR+  I  A +  M V+E+++LS +D WFL Q +++I  E  L 
Sbjct: 422  D----ELINELTNPGPDRLWYIGDAFRAEMSVEEVYKLSGVDPWFLVQIEDIIKTENALK 477

Query: 563  TQSVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFE 622
            + S+S++     + +KR+GF+DK+++     TE EVR+ R SL + P YKRVDTCAAEF 
Sbjct: 478  SVSLSDIDHKQMWRLKRKGFADKRLSVLLNKTEAEVRDYRQSLDIRPVYKRVDTCAAEFA 537

Query: 623  ANTPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIM 682
            + T Y+YS+Y+ ECE+ PT ++K+++LGGGPNRIGQGIEFDYCC H + +++  GYETIM
Sbjct: 538  SATAYLYSTYEEECEARPTNRRKIVVLGGGPNRIGQGIEFDYCCVHAALAMREDGYETIM 597

Query: 683  MNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYL 742
            +N NPETVSTDYDTSDRL+FEP+T+EDV+ +IDLE+PEG+IVQFGGQTPLKL+       
Sbjct: 598  VNCNPETVSTDYDTSDRLFFEPVTIEDVIEIIDLEKPEGVIVQFGGQTPLKLA------- 650

Query: 743  DEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIA 802
               R   A G   V I GT+PD+ID AEDRERF  +I++L ++QP     +S  +AL  A
Sbjct: 651  ---RALEAKG---VPIIGTTPDAIDRAEDRERFQHMIQKLGLKQPANTTVRSVDEALEAA 704

Query: 803  KEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVD 862
              IGYP+VVRPSYVLGGRAMEIV+ +E L+ Y++NAV V  + PVL+D +LS AIE+D+D
Sbjct: 705  ASIGYPLVVRPSYVLGGRAMEIVFREEDLLRYMKNAVLVSDDSPVLLDSFLSAAIEVDID 764

Query: 863  ALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCG 922
            A++D    VVIG IM+HIEQAGVHSGDSAC +P   +     D +     ++A  L VCG
Sbjct: 765  AVSDG-KTVVIGAIMQHIEQAGVHSGDSACALPPYNLPMDVQDEMREQVKQMALELGVCG 823

Query: 923  LMNCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEV 982
            LMN Q A   + ++Y++E NPRASRTVPFVSK IG  LAK AA  M+G+SL   GFTKE+
Sbjct: 824  LMNVQLAWQDN-EIYVIEVNPRASRTVPFVSKCIGESLAKVAARCMAGQSLESQGFTKEI 882

Query: 983  IPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSG 1042
            IP + SVKEAVLPF KF G D +LGPEM+STGEVMG   +FP AFAKAQ+A+G   P  G
Sbjct: 883  IPNYFSVKEAVLPFNKFPGVDPILGPEMKSTGEVMGTGATFPDAFAKAQLASGGNAPREG 942

Query: 1043 TVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGD 1102
            TV +S+ D+ KP   ++A+    IG+KI +T GTA  LE  G++VERV K+ EGRPH  D
Sbjct: 943  TVLISVRDVDKPGAVKVAQNLASIGYKIAATGGTADALEAAGLSVERVNKVSEGRPHIVD 1002

Query: 1103 MVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALA 1149
             V N Q  +++ T+ G     +D   +R    A++V   TT++GA A
Sbjct: 1003 FVKNDQASLIINTTEGRRA-ILDSAPIRASAEAHRVFYTTTLAGAEA 1048


>gi|407938536|ref|YP_006854177.1| carbamoyl-phosphate synthase large subunit [Acidovorax sp. KKS102]
 gi|407896330|gb|AFU45539.1| carbamoyl-phosphate synthase large subunit [Acidovorax sp. KKS102]
          Length = 1081

 Score = 1242 bits (3213), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 642/1082 (59%), Positives = 801/1082 (74%), Gaps = 32/1082 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTDL+ ILI+GAGPI+IGQACEFDYSG QACKAL+EEGY+VILINSNPATIMTDP  AD
Sbjct: 3    KRTDLKSILIIGAGPIIIGQACEFDYSGVQACKALREEGYKVILINSNPATIMTDPATAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+T + VE+++ KERPDA+LPTMGGQTALN A+ L  +G L+KY VELIGA  +A
Sbjct: 63   VTYIEPITWQTVEKIIAKERPDAILPTMGGQTALNCALDLWRNGVLDKYKVELIGATPEA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  FK AM  IG+ +  SGI +++DE  ++   +G FP +IRP+FTLGGTGGGI
Sbjct: 123  IDKAEDRLKFKDAMTKIGLGSARSGIAHSMDEAWAVQKSVG-FPTVIRPSFTLGGTGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN EEFE ICK GL AS T+++L+E+SLLGWKEYE+EV+RD ADN +IICSIEN+DPMG
Sbjct: 182  AYNPEEFETICKRGLEASPTNELLIEESLLGWKEYEMEVVRDKADNCIIICSIENLDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGV+ GGSNVQF+VNP DG ++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQIMRNASLAVLREIGVDTGGSNVQFSVNPKDGRMIVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ N+IT   TPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGYTLDELKNEITGGATPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            FAFEKFP ++  LTTQMKSVGE MA+GRTFQESFQKALR LE G  G     + E   D 
Sbjct: 362  FAFEKFPTADSRLTTQMKSVGEVMAMGRTFQESFQKALRGLEVGVDG-----MNEKTQDR 416

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLT--- 563
            E L+  L  P P+R+  +  A   G+ VDE+++L+ IDKWFL Q +E++ +E  L     
Sbjct: 417  ETLEKELGEPGPERIWYVGDAFAMGLSVDEVYDLTKIDKWFLVQIEEIVKIELELDKIAA 476

Query: 564  ----QSVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAA 619
                 +++++  D    +K++GFSD+++A   K+TEK VRE R +L V P YKRVDTCAA
Sbjct: 477  EKGDAALASLDADTLRTLKKKGFSDRRLAKLLKTTEKSVREARRALNVRPVYKRVDTCAA 536

Query: 620  EFEANTPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYE 679
            EF  NT YMYS+Y+ ECE+APT KKK+++LGGGPNRIGQGIEFDYCC H + +++  GYE
Sbjct: 537  EFATNTAYMYSTYEEECEAAPTDKKKIMVLGGGPNRIGQGIEFDYCCVHAALAMREDGYE 596

Query: 680  TIMMNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIH 739
            TIM+N NPETVSTDYDTSDRLYFEPLT+EDVL ++D E+P G+IVQ+GGQTPLKL+L + 
Sbjct: 597  TIMVNCNPETVSTDYDTSDRLYFEPLTLEDVLEIVDKEKPHGVIVQYGGQTPLKLALGLE 656

Query: 740  QYLDEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADAL 799
                      A G   V I GTSPD IDAAEDRERF  ++ +L + QP    A++EA+AL
Sbjct: 657  ----------AEG---VPIIGTSPDMIDAAEDRERFQKLLGDLGLRQPPNATARTEAEAL 703

Query: 800  AIAKEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEI 859
              A  +GYP+VVRPSYVLGGRAMEIV+    L  Y+  AV+V  + PVL+D++L+DAIE 
Sbjct: 704  EKAATLGYPLVVRPSYVLGGRAMEIVHEQRDLERYMREAVKVSNDSPVLLDRFLNDAIEC 763

Query: 860  DVDALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLN 919
            DVD L D  G   IGG+MEHIEQAGVHSGDSAC +P   +  + +D +   +  +A+ LN
Sbjct: 764  DVDCLRDPEGKTFIGGVMEHIEQAGVHSGDSACSLPPYYLKQATVDELKRQSAAMAEGLN 823

Query: 920  VCGLMNCQYAITTSGD---VYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDL 976
            V GLMN Q+AI        +Y+LE NPRASRTVPFVSKA G  LAK AA  M+G++L   
Sbjct: 824  VVGLMNVQFAIQEVDGKDVIYVLEVNPRASRTVPFVSKATGIQLAKVAARCMAGQTLASQ 883

Query: 977  GFTKEVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQ 1036
            G TKEV P + SVKEAV PF KF G D +LGPEM+STGEVMG+  +F  AF K+Q+ AG 
Sbjct: 884  GITKEVTPPYFSVKEAVFPFVKFPGVDTILGPEMKSTGEVMGVGKTFGEAFVKSQLGAGT 943

Query: 1037 KLPLSGTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEG 1096
            KLP SG VFL++ +  KP    IA+  + +GF +V+T GTA  +   G+ V  V K+ EG
Sbjct: 944  KLPTSGKVFLTVKNNDKPRAVDIARQLVALGFDLVATKGTAAAIAEAGVPVVVVNKVTEG 1003

Query: 1097 RPHAGDMVANGQIQMMVITSSGDSLDQI-DGLKLRRRGLAYKVPVITTVSGALANAEAIR 1155
            RPH  DM+ N +I +MVI +  +  + I D   +R   L  +V   TT+ GA A  E ++
Sbjct: 1004 RPHIVDMIKNNEI-VMVINTVEERRNAIADSRAIRTSSLLARVTTFTTIFGAEAAVEGMK 1062

Query: 1156 SL 1157
             L
Sbjct: 1063 YL 1064


>gi|350570603|ref|ZP_08938955.1| carbamoyl-phosphate synthase, large subunit [Neisseria wadsworthii
            9715]
 gi|349795805|gb|EGZ49599.1| carbamoyl-phosphate synthase, large subunit [Neisseria wadsworthii
            9715]
          Length = 1069

 Score = 1242 bits (3213), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 618/1076 (57%), Positives = 801/1076 (74%), Gaps = 22/1076 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTDL+ ILI+GAGPIVIGQACEFDYSG QACKAL+EEGY+VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDLKSILIIGAGPIVIGQACEFDYSGAQACKALREEGYKVILVNSNPATIMTDPEMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  + VE+++ KERPDA+LPTMGGQTALN A+ LA +G L KY VELIGA  DA
Sbjct: 63   VTYIEPIMWQTVEKIIAKERPDAVLPTMGGQTALNCALDLARNGVLAKYNVELIGATEDA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  FK+AM+ IG+  P S + +T++E ++   ++G FP +IRP+FT+GG+GGGI
Sbjct: 123  IDKAEDRGRFKEAMEKIGLHCPKSFVCHTMNEALAAQEQVG-FPTLIRPSFTMGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYNK+EF AIC+ G  AS T ++L+E+S+LGWKEYE+EV+RD  DN +IICSIEN DPMG
Sbjct: 182  AYNKDEFLAICERGFDASPTHELLIEQSVLGWKEYEMEVVRDKNDNCIIICSIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGV+ GGSNVQFA+NP +GE++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQIMRNASLAVLREIGVDTGGSNVQFAINPENGEMIVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VG++LD++ NDIT  +TPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGFTLDELRNDITGGRTPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            FAFEKFP ++  LTTQMKSVGE MA+GRT QES QKALR LE G  G+   +      D 
Sbjct: 362  FAFEKFPAADDRLTTQMKSVGEVMAMGRTIQESMQKALRGLETGLCGFNPRS-----DDK 416

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
              ++  L  P P+R+  +  A + G   +EIHE+  ID WFL Q ++L+  EQ +    +
Sbjct: 417  NVIRRELANPGPERILYVADAFRAGFSKEEIHEICAIDPWFLAQIEDLVQEEQKVTDGRL 476

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
            +++       +KR+GFSDK++A     +EKEVRE R  L + P YKRVDTCAAEF+++T 
Sbjct: 477  NDLDYATLRRLKRKGFSDKRLAQLLGLSEKEVREHRYGLKLHPVYKRVDTCAAEFQSDTA 536

Query: 627  YMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSN 686
            Y+YS+Y+ ECE+ P++K+KV+ILGGGPNRIGQGIEFDYCC H + +L+ +G+ETIM+N N
Sbjct: 537  YLYSTYEEECEARPSEKRKVMILGGGPNRIGQGIEFDYCCVHAALALRESGFETIMVNCN 596

Query: 687  PETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHR 746
            PETVSTD+DTSDRLYFEPLT+EDVL ++  E P G+IV +GGQTPLKL+           
Sbjct: 597  PETVSTDFDTSDRLYFEPLTLEDVLEIVRTENPWGVIVHYGGQTPLKLA----------- 645

Query: 747  LPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEIG 806
              +A  +  V I GTS DSIDAAEDRERF  ++ +L + QP    A++E +AL +A+EIG
Sbjct: 646  --NALVENGVNIIGTSADSIDAAEDRERFQKVLNDLGLRQPPNRTARNEEEALVLAEEIG 703

Query: 807  YPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALAD 866
            YP+VVRPSYVLGGRAM++V++ E L  Y+  AV+V  + PVL+D +L++AIE+DVD ++D
Sbjct: 704  YPLVVRPSYVLGGRAMQVVHSAEQLQKYMREAVQVSEDSPVLLDFFLNNAIEVDVDCVSD 763

Query: 867  SCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNC 926
               ++VIGGIM+HIEQAG+HSGDS C +P  ++S    + I   T  +A  LNV GLMN 
Sbjct: 764  G-KDIVIGGIMQHIEQAGIHSGDSGCSLPPYSLSEEIQEEIRRQTKAMAYALNVVGLMNV 822

Query: 927  QYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPKH 986
            Q+A+   G V++LE NPRASRTVPFVSKA   PLAK  A  M+G SL + G  KEVIP  
Sbjct: 823  QFAV-QDGVVFVLEVNPRASRTVPFVSKATSVPLAKVGARAMAGISLKEQGIEKEVIPDF 881

Query: 987  VSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVFL 1046
             +VKEAV PF KF G D +LGPEMRSTGEVMG+  +F  A+ KAQ+ AG+++P  G VF+
Sbjct: 882  YAVKEAVFPFIKFPGVDTILGPEMRSTGEVMGVGETFSEAYLKAQLGAGERMPAVGKVFI 941

Query: 1047 SLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVAN 1106
            ++ D  KP + + AK F  +G+ + +T GTA +L+  G+ V+ V K+ EGRPH  D + N
Sbjct: 942  AVRDEDKPLVVQTAKNFQSLGYGVCATRGTAAYLKEHGVGVQVVNKVQEGRPHIVDAIKN 1001

Query: 1107 GQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTV 1162
            G+I ++V T   D     D   +RR  L  +VP  TT++G  A +E ++SL +  V
Sbjct: 1002 GEIALVVNTVISDPQAVADSHSIRRSALTQRVPQYTTIAGGEAMSEGVKSLNAMGV 1057


>gi|91788540|ref|YP_549492.1| carbamoyl-phosphate synthase large subunit [Polaromonas sp. JS666]
 gi|91697765|gb|ABE44594.1| carbamoyl-phosphate synthase large subunit [Polaromonas sp. JS666]
          Length = 1076

 Score = 1241 bits (3212), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 639/1082 (59%), Positives = 797/1082 (73%), Gaps = 26/1082 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ +LI+GAGPI+IGQACEFDYSG QACKAL+EEGY+VILINSNPATIMTDP  AD
Sbjct: 3    KRTDIKSVLIIGAGPIIIGQACEFDYSGVQACKALREEGYKVILINSNPATIMTDPATAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+T + VE+++ KERPDA+LPTMGGQTALN A+ L   G LEKY VELIGAK +A
Sbjct: 63   VTYIEPITWQTVEKIIAKERPDAILPTMGGQTALNCALDLWHHGVLEKYKVELIGAKPEA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  FK+AM  IG+ +  SGI +++DE  ++   +G FP +IRP+FTLGGTGGGI
Sbjct: 123  IDKAEDRLKFKEAMTKIGLGSARSGIAHSMDEAWAVQKTVG-FPTVIRPSFTLGGTGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN EEFE ICK GL AS T+++L+E+SLLGWKEYE+EV+RD ADN +I+CSIEN+DPMG
Sbjct: 182  AYNPEEFEVICKRGLEASPTNELLIEESLLGWKEYEMEVVRDTADNCIIVCSIENLDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ LR+ S+A++REIGV+ GGSNVQF++NPVDG ++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQILRNASLAVLREIGVDTGGSNVQFSINPVDGRMVVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ N+IT   TPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGYTLDELRNEITGGATPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            FAFEKFP ++  LTTQMKSVGE MA+GRTFQESFQKALR LE G  G     + E   D 
Sbjct: 362  FAFEKFPTADSRLTTQMKSVGEVMAMGRTFQESFQKALRGLEVGVDG-----MNEKTQDR 416

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
            E L+  L  P PDR+  +  A   GM VDE+  L+ ID WFL Q ++++ +E  L T S+
Sbjct: 417  EVLEKELGAPGPDRIWYVGDAFALGMSVDEVFALTRIDPWFLVQIEQIVKIELELETTSL 476

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
              +       +K++GFSD+++A   K+T+  +REKR  LGV P YKRVDTCAAEF  NT 
Sbjct: 477  DKIDAVTLRALKQKGFSDRRLAKQLKTTDTAIREKRRELGVRPVYKRVDTCAAEFSTNTA 536

Query: 627  YMYSSYDF---ECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMM 683
            YMYS+Y+    ECE+APT KKK+++LGGGPNRIGQGIEFDYCC H + +++  GYETIM+
Sbjct: 537  YMYSTYEAEGSECEAAPTDKKKIMVLGGGPNRIGQGIEFDYCCVHAALAMREDGYETIMV 596

Query: 684  NSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLD 743
            N NPETVSTDYDTSDRLYFEPLT+EDVL ++D E+P G+IVQ+GGQTPLKL+L +     
Sbjct: 597  NCNPETVSTDYDTSDRLYFEPLTLEDVLEIVDKEKPLGVIVQYGGQTPLKLALDLE---- 652

Query: 744  EHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAK 803
                  A+G   V I GTSPD IDAAEDRERF  ++ EL + QP    A++E +AL  A 
Sbjct: 653  ------ANG---VPIIGTSPDMIDAAEDRERFQKLLHELKLRQPPNATARTEPEALEKAA 703

Query: 804  EIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDA 863
             +GYP+VVRPSYVLGGRAMEIV+    L  Y+  AV+V  + PVL+D++L+DAIE DVD 
Sbjct: 704  ALGYPLVVRPSYVLGGRAMEIVHEQRDLERYMREAVKVSHDSPVLLDRFLNDAIECDVDC 763

Query: 864  LADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGL 923
            + D  G   IGG+MEHIEQAGVHSGDSAC +P  ++ +  +  I   T  +A+ LNV GL
Sbjct: 764  IRDDKGVTFIGGVMEHIEQAGVHSGDSACSLPPYSLRAETVTEIKRQTAAMAQALNVVGL 823

Query: 924  MNCQYAITT---SGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTK 980
            MN Q+AI        +Y+LE NPRASRTVPFVSKA G  LAK AA  M G+SL   G T 
Sbjct: 824  MNVQFAIQNIDGKDVIYVLEVNPRASRTVPFVSKATGIQLAKVAARCMVGQSLASQGVTS 883

Query: 981  EVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPL 1040
            EV P + SVKEAV PF KF G D +LGPEM+STGEVMG+  +F  AF K+Q+ AG KLP 
Sbjct: 884  EVTPPYFSVKEAVFPFVKFPGVDTILGPEMKSTGEVMGVGKTFGEAFVKSQLGAGTKLPT 943

Query: 1041 SGTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHA 1100
            SG VFL++ +  KP    +A++   + F++V+T GTA  ++  GIA   V K+ EGRPH 
Sbjct: 944  SGKVFLTVKNNDKPRAVEVARSLAALKFELVATKGTAAAIQAAGIACTVVNKVTEGRPHV 1003

Query: 1101 GDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSN 1160
             DM+ N +I +++ T         D  ++R   L  +V   TT++GA A  E ++ L + 
Sbjct: 1004 VDMIKNDEIALVINTVEERRNAIADSRQIRTSALLARVTTYTTIAGAEAAVEGMKYLDNL 1063

Query: 1161 TV 1162
             V
Sbjct: 1064 NV 1065


>gi|374852421|dbj|BAL55354.1| carbamoyl-phosphate synthase large subunit [uncultured gamma
            proteobacterium]
          Length = 1078

 Score = 1241 bits (3211), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 616/1088 (56%), Positives = 801/1088 (73%), Gaps = 28/1088 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD+  +L+LGAGPIVIGQACEFDYSGTQA KAL+EEGY  +L+NSNPATIMTDP +AD
Sbjct: 3    KRTDIHTVLVLGAGPIVIGQACEFDYSGTQALKALREEGYRTVLVNSNPATIMTDPNMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
            R YI P+    V +++E ERPDALLPTMGGQTALN A+ L   G LE+YGVELIGA   A
Sbjct: 63   RVYIEPVDWPTVAKIIESERPDALLPTMGGQTALNCAMDLYRRGLLEQYGVELIGASPKA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I++AEDRDLF++AM  IG++ P S I + L+E +     IG FP +IRP+FTLGG+GGGI
Sbjct: 123  IEQAEDRDLFRRAMVEIGLEVPKSEIAHNLEEALDALARIG-FPAVIRPSFTLGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEF  IC+ GL  S   ++L+E+S+LGWKE+E+EV+RD  DN +I+C+IEN+DPMG
Sbjct: 182  AYNREEFVEICERGLELSPVRELLIEESVLGWKEFEMEVVRDSHDNCIIVCAIENLDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQR+RD +IA++R+IGV+ GGSNVQFA+NP DG ++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQRMRDAAIAVLRKIGVDTGGSNVQFALNPKDGRLVVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKK-TPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ N+IT    PASFEP++DYVVTK+PR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGYTLDELRNEITGGLIPASFEPTLDYVVTKVPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            FAFEKFP ++  LTTQMKSVGE MA+GRTFQES QKALR LE G  G      ++LD + 
Sbjct: 362  FAFEKFPDADDRLTTQMKSVGEVMAIGRTFQESLQKALRGLEIGVDGL----TEKLDLNA 417

Query: 507  E----QLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLL 562
            E    +L   L  P P R+  +  A + GM ++E+H  S ID WFL Q +E++ VE  L 
Sbjct: 418  EDARDRLVRELSSPGPHRLWYVADAFRFGMTLEEVHGYSRIDPWFLAQIEEIVRVEDSLK 477

Query: 563  TQSVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFE 622
             ++++ +  ++ Y +KR GF+D ++A+   S+E EVR  R   G+ P YKR+D+CAAEF 
Sbjct: 478  AKTLAALDAEELYRLKRMGFADSRLAYLLDSSEAEVRATRHKYGIRPVYKRIDSCAAEFA 537

Query: 623  ANTPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIM 682
            + T Y+YS+Y+ ECE+ P+ + K+++LGGGPNRIGQGIEFDYCC H + +L+  G+ETIM
Sbjct: 538  STTAYLYSTYETECEANPSARPKIVVLGGGPNRIGQGIEFDYCCVHAALALREDGFETIM 597

Query: 683  MNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYL 742
            +N NPETVSTD+D SDRLYFEPLT+EDVL ++ LE+P+G+IVQ+GGQTPLKL+       
Sbjct: 598  VNCNPETVSTDFDASDRLYFEPLTLEDVLEIVALEKPQGVIVQYGGQTPLKLA------- 650

Query: 743  DEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIA 802
               R   A+G   V I GTSPDSID AEDRERF  +++ L ++QP+   A+S  +A+  A
Sbjct: 651  ---RDLEAAG---VPIIGTSPDSIDLAEDRERFQKLVERLKLKQPENRTARSLEEAILAA 704

Query: 803  KEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVD 862
            +E+G+P+VVRPSYVLGGRAMEIV+ +E L  Y+  AV V    PVL+D++L DA+E+DVD
Sbjct: 705  RELGFPLVVRPSYVLGGRAMEIVFNEEELRRYMVEAVSVSNRSPVLLDRFLDDAVEVDVD 764

Query: 863  ALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCG 922
            A++D    V IG +MEHIEQAG+HSGDSAC IP   ++ +  + +S     LAK L V G
Sbjct: 765  AVSDG-DQVFIGAVMEHIEQAGIHSGDSACSIPPFGLARAVQEQLSDQVRCLAKALGVVG 823

Query: 923  LMNCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEV 982
            LMN Q+A+   G++Y+LE NPRASRTVPFVSKA G PLAK A   M G+SL   G T+E 
Sbjct: 824  LMNAQFAV-KDGEIYILEVNPRASRTVPFVSKATGLPLAKIAVRCMVGRSLAAQGVTQER 882

Query: 983  IPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSG 1042
            +P++ +VKEAV PF KF   D LLGPEM+STGEVMG+ MSF  A+AKAQ AAG +LP SG
Sbjct: 883  VPRYYAVKEAVFPFIKFPKVDPLLGPEMKSTGEVMGVGMSFGEAYAKAQQAAGSRLPRSG 942

Query: 1043 TVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGD 1102
             V LS+ D  K  L  IAK  ++ GF +V+T GTA  L+  GIA   V K+ +GRPH  D
Sbjct: 943  RVLLSVRDRDKTRLVGIAKNLVEKGFTLVATPGTAQALQTAGIACAVVNKVGQGRPHVVD 1002

Query: 1103 MVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTV 1162
            ++ NG++++++ T+ G      D   +RR  L  ++   TT++GA A   A+ +L  NT 
Sbjct: 1003 LIKNGEVELIINTTEGKKAIA-DSFLIRREALQRQITYTTTLAGAFAICHALDAL--NTG 1059

Query: 1163 TMTALQDF 1170
             + +LQD 
Sbjct: 1060 QVYSLQDL 1067


>gi|359453075|ref|ZP_09242401.1| carbamoyl-phosphate synthase large subunit [Pseudoalteromonas sp.
            BSi20495]
 gi|358049883|dbj|GAA78650.1| carbamoyl-phosphate synthase large subunit [Pseudoalteromonas sp.
            BSi20495]
          Length = 1072

 Score = 1241 bits (3211), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 619/1077 (57%), Positives = 788/1077 (73%), Gaps = 18/1077 (1%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILILGAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPDMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  E+VE+++EKE+PDA+LPTMGGQTALN A+ L + G L K+GVELIGA  DA
Sbjct: 63   ATYIEPIHWEVVEKIIEKEKPDAVLPTMGGQTALNCALDLDKHGVLAKHGVELIGATADA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAE+R+ F  AMK IG++ P + I +T++E       IG  P IIRP+FT+GGTGGG+
Sbjct: 123  IDKAENRERFDVAMKNIGLECPRAEIAHTMEEAKDTMTRIG-LPCIIRPSFTMGGTGGGV 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN EEFE IC+ GL  S T+++L+++SL+GWKEYE EV+RD  DN +I+C+IEN DPMG
Sbjct: 182  AYNMEEFEEICERGLDLSPTNELLIDESLIGWKEYETEVVRDKNDNCIIVCTIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGVE GGSNVQF +NP DG +++IEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQIMRNASMAVLREIGVETGGSNVQFGINPEDGRMVIIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT  KTPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKIAAKLAVGYTLDELQNDITGGKTPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            F FEKF G+   LTTQMKSVGE MA+GR  QES  KALR LE G +G+      +     
Sbjct: 362  FNFEKFAGANDRLTTQMKSVGEVMAIGRNQQESLHKALRGLEVGATGFNPIVALDDPKAK 421

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
            E++   LR P  +R+  I  AM+ GM VD+++EL+ +++WFL Q ++++  E  +    +
Sbjct: 422  EKIIRELREPGAERIWYIADAMRHGMSVDDVYELTKVNRWFLVQIEDILKDEAKIGEVGM 481

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
            + +  D   ++KR+GF+D +IA     +E E+R+KR  L ++P YKRVDTCAAEF ++T 
Sbjct: 482  AGLNADFLRKLKRKGFADPRIAEIAGVSEAEIRKKRHLLNIVPVYKRVDTCAAEFSSDTA 541

Query: 627  YMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSN 686
            YMYS+YD ECE+ PT + K++++GGGPNRIGQGIEFDYCC H S +L+  GYETIM+N N
Sbjct: 542  YMYSTYDEECEANPTDRDKIMVIGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVNCN 601

Query: 687  PETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHR 746
            PETVSTDYDTSDRLYFEP+T+EDVL ++ +E+P+G+IVQ+GGQTPLKL+          R
Sbjct: 602  PETVSTDYDTSDRLYFEPITLEDVLEIVRVEKPKGVIVQYGGQTPLKLA----------R 651

Query: 747  LPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEIG 806
               A+G   V + GTSPD+ID AEDRERF  +++ L++ QP+     S  +AL  + EIG
Sbjct: 652  ELEANG---VPVIGTSPDAIDRAEDRERFQQLVERLNLLQPENATVTSTEEALLKSVEIG 708

Query: 807  YPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALAD 866
            +P+VVRPSYVLGGRAMEIVY ++ L  Y+  AV+   E PVL+D++L +AIE+DVDA+ D
Sbjct: 709  FPLVVRPSYVLGGRAMEIVYDEDDLRRYMTEAVQASNEAPVLLDRFLDNAIEVDVDAICD 768

Query: 867  SCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNC 926
                V+IGGIMEHIEQAGVHSGDSAC +P  ++S    D +      +A  L V GLMN 
Sbjct: 769  G-EQVIIGGIMEHIEQAGVHSGDSACSLPAHSLSQEVQDVMRKQVTDMALELGVVGLMNT 827

Query: 927  QYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPKH 986
            Q+A+     VYL+E NPRA+RTVPFVSKA G  LAK AA  M+G+SL   G TKEVIP +
Sbjct: 828  QFAVKED-KVYLIEVNPRAARTVPFVSKATGVALAKVAARCMAGQSLASQGITKEVIPPY 886

Query: 987  VSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVFL 1046
             SVKE VLPF KFQG D + GPEMRSTGEVMG+  +F  AFAKAQ+ A   LP  G   L
Sbjct: 887  YSVKEVVLPFAKFQGVDPIRGPEMRSTGEVMGVGDTFAEAFAKAQLGASNTLPRGGRALL 946

Query: 1047 SLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVAN 1106
            S+ +  KP +  +AK   D+GF++ +T GTAH LE  GI V RV K++EGRPH  D + N
Sbjct: 947  SVRNSDKPRIVELAKIMTDLGFELDATGGTAHALEEAGIEVRRVNKVYEGRPHILDYIKN 1006

Query: 1107 GQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTVT 1163
             +   +V T+ G    + D   LRR  L  K    TT++ A AN  A ++   + VT
Sbjct: 1007 KEYSYIVNTTEGRQAIE-DSKVLRRGALQNKTNYTTTLNAAFANCTANKADDRSKVT 1062


>gi|456063113|ref|YP_007502083.1| carbamoyl phosphate synthase large subunit [beta proteobacterium CB]
 gi|455440410|gb|AGG33348.1| carbamoyl phosphate synthase large subunit [beta proteobacterium CB]
          Length = 1087

 Score = 1241 bits (3210), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 625/1085 (57%), Positives = 790/1085 (72%), Gaps = 32/1085 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KR+D++ ILI+GAGPIVIGQACEFDYSG QACKAL++EGY+VIL+NSNPATIMTDP +AD
Sbjct: 3    KRSDIKSILIIGAGPIVIGQACEFDYSGAQACKALRDEGYKVILVNSNPATIMTDPEMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+T E+VE+++  E+PDA+LPTMGGQTALN A+ L   G LEKYG ELIGA  +A
Sbjct: 63   VTYIEPITWEVVERIIATEKPDAILPTMGGQTALNCALDLHRHGVLEKYGCELIGASPEA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGE------FPLIIRPAFTLG 261
            I KAEDR  FK AM  IG+ +  SGI +++DE   +   I +      FP++IRP+FT+G
Sbjct: 123  IDKAEDRQKFKDAMTKIGLGSAKSGIAHSMDEAHEVQQRIQKETGSLGFPVVIRPSFTMG 182

Query: 262  GTGGGIAYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIE 321
            G+GGGIAYN+EEFE ICK GL  S T ++L+E+SLLGWKE+E+EV+RD ADN +I+CSIE
Sbjct: 183  GSGGGIAYNREEFEEICKRGLDLSPTRELLIEESLLGWKEFEMEVVRDRADNCIIVCSIE 242

Query: 322  NVDPMGVHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEV 381
            N+DPMGVHTGDSITVAPAQTLTDKEYQ LR+ SIA++REIGV+ GGSNVQF++NPVDG +
Sbjct: 243  NLDPMGVHTGDSITVAPAQTLTDKEYQILRNASIAVLREIGVDTGGSNVQFSINPVDGRM 302

Query: 382  MVIEMNPRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKK-TPASFEPSIDYV 440
            +VIEMNPRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT   TPASFEPSIDYV
Sbjct: 303  IVIEMNPRVSRSSALASKATGFPIAKIAAKLAVGYTLDELKNDITGGLTPASFEPSIDYV 362

Query: 441  VTKIPRFAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVK 500
            VTKIPRFAFEKFP ++  LTTQMKSVGE MA+GRTFQESFQKALR LE G  G     + 
Sbjct: 363  VTKIPRFAFEKFPQADSRLTTQMKSVGEVMAIGRTFQESFQKALRGLEVGVDG-----LD 417

Query: 501  ELDWDWEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQF 560
            E+  D + +   +  P PDR+  +  A + GM +DEI+  + +D WFL Q +ELI +E  
Sbjct: 418  EVSTDLDDIIQEIGEPGPDRIWYLADAFRMGMGLDEIYNETKVDPWFLEQIEELITMETE 477

Query: 561  LLTQSVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAE 620
            L  + + +++  +   +K++GFSD+++A         VR  R  L VIP YKRVDTCAAE
Sbjct: 478  LKQRKIDSLSAPELRFIKQKGFSDRRLAKLLGVDASSVRAARHRLKVIPVYKRVDTCAAE 537

Query: 621  FEANTPYMYSSYDF---ECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAG 677
            F  NT Y+YS+Y+    ECES P+ K K+++LGGGPNRIGQGIEFDYCC H + +++  G
Sbjct: 538  FSTNTAYLYSTYEAEHGECESQPSTKDKIMVLGGGPNRIGQGIEFDYCCVHAALAMREDG 597

Query: 678  YETIMMNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLP 737
            YETIM+N NPETVSTDYDTSDRLYFEPLT+EDVL ++ +E+P+G+IVQ+GGQTPLKL+L 
Sbjct: 598  YETIMVNCNPETVSTDYDTSDRLYFEPLTLEDVLEIVAIEKPKGVIVQYGGQTPLKLALD 657

Query: 738  IHQYLDEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEAD 797
            +           A+G   V I GTSPD IDAAEDRERF  ++ EL++ QP    A++E +
Sbjct: 658  LE----------ANG---VPIIGTSPDMIDAAEDRERFQKLLHELNLRQPPNRTARAEDE 704

Query: 798  ALAIAKEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAI 857
            AL +A+EIGYP+VVRPSYVLGGRAMEIV+    L  Y+  AV+V  + PVL+D++L+DAI
Sbjct: 705  ALKLAEEIGYPLVVRPSYVLGGRAMEIVHDGRDLERYMREAVKVSHDSPVLLDRFLNDAI 764

Query: 858  EIDVDALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKR 917
            E DVD ++D    V IGG+MEHIEQAGVHSGDSAC +P  ++S   +  I   T  +AK 
Sbjct: 765  ECDVDCISDG-QRVFIGGVMEHIEQAGVHSGDSACSLPPYSLSDETIAEIKRQTAAMAKG 823

Query: 918  LNVCGLMNCQYAITTSGD---VYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLN 974
            LNV GLMN Q+AI        +Y+LE NPRASRTVPFVSKA G  LAK AA  M G++L+
Sbjct: 824  LNVVGLMNVQFAIQNVDGKDVIYVLEVNPRASRTVPFVSKATGLQLAKIAARCMVGQTLD 883

Query: 975  DLGFTKEVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAA 1034
              G   EV P + SVKEAV PF KF G D +LGPEMRSTGEVMG+  +F  A  K+Q+ A
Sbjct: 884  QQGIQSEVKPAYYSVKEAVFPFNKFPGIDPILGPEMRSTGEVMGVGKTFGEALFKSQLGA 943

Query: 1035 GQKLPLSGTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMH 1094
            G KLP SGTV L++ D  KP    +AK    +GF +V+T GTA  +E  G+ V  V K+ 
Sbjct: 944  GIKLPKSGTVVLTVKDSDKPKAVEVAKLLHQLGFPMVATKGTAAAIEAAGLPVRVVNKVK 1003

Query: 1095 EGRPHAGDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAI 1154
            +GRPH  D++ NG+I ++  T         D   +R    A  V   TT+S A A  + +
Sbjct: 1004 DGRPHIVDLIKNGEISLVFTTVDETRTAIADSRSIRTSAQANNVTYYTTISAARAVMDGL 1063

Query: 1155 RSLKS 1159
             + +S
Sbjct: 1064 MTSQS 1068


>gi|332295571|ref|YP_004437494.1| carbamoyl-phosphate synthase large subunit [Thermodesulfobium
            narugense DSM 14796]
 gi|332178674|gb|AEE14363.1| carbamoyl-phosphate synthase, large subunit [Thermodesulfobium
            narugense DSM 14796]
          Length = 1076

 Score = 1241 bits (3210), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 628/1089 (57%), Positives = 814/1089 (74%), Gaps = 21/1089 (1%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++KILI+G+GPI+IGQACEFDYSGTQA KALK+EGYEV+L+NSNPATIMTDP +AD
Sbjct: 3    KRTDIKKILIIGSGPIIIGQACEFDYSGTQAIKALKQEGYEVVLVNSNPATIMTDPEMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+TP++V +V++KERPDA+LPT+GGQTALN+AV LAE+G LEKY VE++G   DA
Sbjct: 63   HTYIEPITPQVVTKVIKKERPDAILPTLGGQTALNVAVNLAEAGILEKYNVEMLGVNTDA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            IKK EDR LF++ MK IGV  P SGI ++L+E   IA E+G FPLIIRP+FTLGGTGGGI
Sbjct: 123  IKKGEDRLLFRETMKEIGVDLPKSGIAHSLNEAEKIAFELG-FPLIIRPSFTLGGTGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN ++       GL  S+  QVL+E+S+L WKE+ELEVMRD  DNVVIICSIEN DPMG
Sbjct: 182  AYNFDDLRYHVSNGLDLSMIHQVLIEESVLNWKEFELEVMRDKKDNVVIICSIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            +HTGDSITVAP QTLTDKEYQ LRD SI +IR+IGV+ GGSN+QFA+NP DG +++IEMN
Sbjct: 242  IHTGDSITVAPIQTLTDKEYQVLRDMSIKVIRKIGVDTGGSNIQFAMNPKDGRIVIIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRF 447
            PRVSRSSALASKATGFPIAK+AA L+VGY+LD++ NDITKKTPASFEP++DYVV KIPR+
Sbjct: 302  PRVSRSSALASKATGFPIAKIAALLAVGYTLDEVTNDITKKTPASFEPTLDYVVVKIPRW 361

Query: 448  AFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGC--SNVKELDWD 505
             FEKF G+  +L TQMKSVGEAMA+GR F+E+FQKA+RSLE G  G+G    +   ++  
Sbjct: 362  DFEKFHGAPRVLDTQMKSVGEAMAIGRNFKEAFQKAIRSLENGRRGFGFDGKDADLMNLT 421

Query: 506  WEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQS 565
             E+L   LR P  +R+  I+  ++ G+ VD ++EL+ IDKWFL + +E++   +  + ++
Sbjct: 422  EEELIRELRTPKDNRIFTIHRLLEIGVGVDRLNELTGIDKWFLKELEEIVLTGKEFMNRN 481

Query: 566  VSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANT 625
            + ++ KD+ + +KR GFSD QI F TKS+E+EV + R  LG+ P YK VDTC+AEFE+ T
Sbjct: 482  LYSINKDEMFSLKRDGFSDFQIGFLTKSSEEEVTKYRKKLGIFPVYKTVDTCSAEFESFT 541

Query: 626  PYMYSSYDFECESAPTQKKK-VLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMN 684
            PY YS+YD E E  P   K+ V+ILG GPNRIGQGIEFDYCC H   S +  G   IM+N
Sbjct: 542  PYHYSTYDQENELIPIDNKESVIILGAGPNRIGQGIEFDYCCVHAVDSTKKLGKAAIMVN 601

Query: 685  SNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDE 744
             NPETVSTDYDTSD+L FEPLT EDV+N+++  RP G ++QFGGQTPLKL+    +  ++
Sbjct: 602  CNPETVSTDYDTSDQLLFEPLTFEDVINIVEKIRPLGTLIQFGGQTPLKLA----KSFEK 657

Query: 745  HRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKE 804
              +P         I GTSP++ID AEDRERF+  +++L I +P  GIAKS  +AL +A+ 
Sbjct: 658  LNVP---------ILGTSPEAIDMAEDRERFDLFLEKLKIFRPAAGIAKSPDEALRVARS 708

Query: 805  IGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDAL 864
            +GYPV+VRPSYVLGGRAMEIVY D  L+ Y++ AVEV   +PVLID++L DAIEIDVDAL
Sbjct: 709  LGYPVLVRPSYVLGGRAMEIVYDDNDLMEYIKKAVEVSEAKPVLIDRFLEDAIEIDVDAL 768

Query: 865  ADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLM 924
             D    V IGGIMEHIE+AG+HSGDSAC++PT +++   L  +S  T ++A +L V GL+
Sbjct: 769  CDG-DEVFIGGIMEHIEEAGIHSGDSACVLPTFSLTKEELTELSRITREIALKLGVKGLI 827

Query: 925  NCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIP 984
            N QYAI     +Y+LE NPRASRTVPFVSK IG PLAK A  +  GK + D    + +  
Sbjct: 828  NIQYAIRDK--IYVLEVNPRASRTVPFVSKTIGIPLAKLATQISLGKKIKDFNIKERLDL 885

Query: 985  KHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTV 1044
             +++VKEAVLPF +F G D +LGPEM+STGEVMGID  F  A+AKAQIAAG++LPL G V
Sbjct: 886  PYIAVKEAVLPFGRFSGVDTILGPEMKSTGEVMGIDFEFGKAYAKAQIAAGEELPLRGNV 945

Query: 1045 FLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMV 1104
            F+S+++  K ++  I K+ +++GF I +T GTA  L+  GI V  V K  E      DM+
Sbjct: 946  FVSVSNKHKRNIVFIVKSLVNMGFNIFATQGTAKVLKFNGIKVNEVKKASEDGFTILDMI 1005

Query: 1105 ANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTVTM 1164
             + QIQ+++ T SG    + D  K+RR  L + +P ITT++GA A   AI +LK++ + +
Sbjct: 1006 KDNQIQLIINTPSGKGARK-DDYKIRRMALLHHIPTITTIAGAAATVNAIEALKNSEIEV 1064

Query: 1165 TALQDFFDV 1173
             ++QDF+ +
Sbjct: 1065 KSIQDFYKI 1073


>gi|187929113|ref|YP_001899600.1| carbamoyl phosphate synthase large subunit [Ralstonia pickettii 12J]
 gi|187726003|gb|ACD27168.1| carbamoyl-phosphate synthase, large subunit [Ralstonia pickettii 12J]
          Length = 1081

 Score = 1241 bits (3210), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 623/1084 (57%), Positives = 808/1084 (74%), Gaps = 32/1084 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILI+GAGPI+IGQACEFDYSG QACKAL+EEG++V+L+NSNPATIMTDP  AD
Sbjct: 3    KRTDIKTILIIGAGPIIIGQACEFDYSGAQACKALREEGFKVVLVNSNPATIMTDPNTAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+T E+VE+++ KERPDA+LPTMGGQTALN A+ L   G L+KY VELIGA  +A
Sbjct: 63   VTYIEPITWEVVERIIAKERPDAILPTMGGQTALNCALDLHRHGVLKKYNVELIGASPEA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGE------FPLIIRPAFTLG 261
            I KAEDR  FK AM  IG+ +  SGI +++DE +++ ++I +      +P++IRP+FTLG
Sbjct: 123  IDKAEDRQKFKDAMTKIGLGSAKSGIAHSMDEAVAVQSQIAKETGTSGYPIVIRPSFTLG 182

Query: 262  GTGGGIAYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIE 321
            GTGGGIAYN+EEFE ICK GL  S T+++L+E+SLLGWKEYE+EV+RD ADN +I+CSIE
Sbjct: 183  GTGGGIAYNREEFEEICKRGLDLSPTNELLIEESLLGWKEYEMEVVRDKADNCIIVCSIE 242

Query: 322  NVDPMGVHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEV 381
            N+DPMG+HTGDSITVAPAQTLTDKEYQ LR+ S+A++REIGV+ GGSNVQF++NP DG +
Sbjct: 243  NLDPMGIHTGDSITVAPAQTLTDKEYQILRNASLAVLREIGVDTGGSNVQFSINPQDGRM 302

Query: 382  MVIEMNPRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYV 440
            +VIEMNPRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ N+IT   TPASFEPSIDYV
Sbjct: 303  IVIEMNPRVSRSSALASKATGFPIAKVAAKLAVGYTLDELKNEITGGATPASFEPSIDYV 362

Query: 441  VTKIPRFAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVK 500
            VTK+PRFAFEKFP ++  LTTQMKSVGE MA+GRTFQESFQKALR LE G  G     + 
Sbjct: 363  VTKVPRFAFEKFPQADSHLTTQMKSVGEVMAMGRTFQESFQKALRGLEVGVDG-----LD 417

Query: 501  ELDWDWEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQF 560
            E   D +++   +    PDR+  +  A + G+ +DE++  + +D WFL Q ++++  E  
Sbjct: 418  EKSTDRDEIIEEIGEAGPDRIWYLGDAFRLGLSIDEVYAETSVDPWFLAQIEDIVKTEAL 477

Query: 561  LLTQSVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAE 620
            + ++++ +++  +   +K++GFSD+++A  TK+T K VREKR++  V P YKRVDTCAAE
Sbjct: 478  VKSRTLESLSAAELRLLKQKGFSDRRLAKLTKTTAKAVREKRIAEKVRPVYKRVDTCAAE 537

Query: 621  FEANTPYMYSSYDF---ECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAG 677
            F  NT Y+YS+Y+    ECE+ PT  KK+++LGGGPNRIGQGIEFDYCC H + +L+  G
Sbjct: 538  FATNTAYLYSTYEAEHGECEAEPTSNKKIMVLGGGPNRIGQGIEFDYCCVHAALALREDG 597

Query: 678  YETIMMNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLP 737
            YETIM+N NPETVSTDYDTSDRLYFEP+T+EDVL ++D E+P G+IVQ+GGQTPLKL+L 
Sbjct: 598  YETIMVNCNPETVSTDYDTSDRLYFEPVTLEDVLEIVDKEKPVGVIVQYGGQTPLKLALD 657

Query: 738  IHQYLDEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEAD 797
            +           A+G   V I GTSPD IDAAEDRERF  ++  L + QP    A++E +
Sbjct: 658  LE----------ANG---VPIIGTSPDMIDAAEDRERFQKLLHALGLRQPPNRTARAEDE 704

Query: 798  ALAIAKEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAI 857
            AL +A+EIGYP+VVRPSYVLGGRAMEIV+    L  Y+  AV+V  + PVL+D++L+DAI
Sbjct: 705  ALKLAEEIGYPLVVRPSYVLGGRAMEIVHEPRDLERYMREAVKVSNDSPVLLDRFLNDAI 764

Query: 858  EIDVDALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKR 917
            E DVD L+D    V IGG+MEHIEQAGVHSGDSAC +P  ++S + +D +   T  +AK 
Sbjct: 765  ECDVDCLSDG-KRVFIGGVMEHIEQAGVHSGDSACSLPPYSLSQATVDELKRQTAAMAKA 823

Query: 918  LNVCGLMNCQYAITTSGD---VYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLN 974
            LNV GLMN Q+AI   G    VY+LE NPRASRTVP+VSKA G PLAK AA  M+G+SL+
Sbjct: 824  LNVVGLMNVQFAIQQKGGEDIVYVLEVNPRASRTVPYVSKATGIPLAKVAARCMAGQSLD 883

Query: 975  DLGFTKEVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAA 1034
              G   EV+P + SVKEAV PF KF G D +LGPEMRSTGEVMG+  +F  A  K+Q+AA
Sbjct: 884  SQGVETEVVPAYYSVKEAVFPFNKFPGVDPVLGPEMRSTGEVMGVGKTFGEALFKSQLAA 943

Query: 1035 GQKLPLSGTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMH 1094
            G +LP  GTV +++ D  KP    +A+A   +G+ IV+T GTA  +E  GI V  V K+ 
Sbjct: 944  GSRLPEKGTVLMTVKDSDKPQAVEVARALHTLGYPIVATRGTASAIEAAGIPVRVVNKVK 1003

Query: 1095 EGRPHAGDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAI 1154
            +GRPH  DM+ N +I ++  T         D   +R+  LA +V   TT++GA A  E +
Sbjct: 1004 DGRPHIVDMIKNSEIALVFTTVDETRAAIADSRSIRQAALAQRVTYYTTIAGARAAVEGL 1063

Query: 1155 RSLK 1158
            + ++
Sbjct: 1064 KHMQ 1067


>gi|85058398|ref|YP_454100.1| carbamoyl phosphate synthase large subunit [Sodalis glossinidius str.
            'morsitans']
 gi|84778918|dbj|BAE73695.1| carbamoyl-phosphate synthase large subunit [Sodalis glossinidius str.
            'morsitans']
          Length = 1074

 Score = 1241 bits (3210), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 623/1071 (58%), Positives = 786/1071 (73%), Gaps = 19/1071 (1%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILILGAGPIVIGQACEFDYSG QACKAL+EEGY V+L+NSNPATIMTDP +AD
Sbjct: 3    KRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVVLVNSNPATIMTDPDMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  E+V +++EKERPDALLPTMGGQTALN A+ L   G L+++GVE+IGA  DA
Sbjct: 63   ATYIEPIHWEVVRKIIEKERPDALLPTMGGQTALNCALELGREGVLKEFGVEMIGATADA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  F +AMK IG++T  SGI +T+DE +++A ++G FP IIRP+FT+GGTGGGI
Sbjct: 123  IDKAEDRQRFDKAMKKIGLETARSGIAHTMDEALAVAADVG-FPCIIRPSFTMGGTGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEFE IC+ GL  S T+++L+++SL+GWKEYE+EV+RD  DN +I+CSIENVDPMG
Sbjct: 182  AYNREEFEEICECGLDLSPTTELLIDESLIGWKEYEIEVVRDKKDNCIIVCSIENVDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            +HTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGVE GGSNVQF+VNP  G +++IEMN
Sbjct: 242  IHTGDSITVAPAQTLTDKEYQIMRNASMAVLREIGVETGGSNVQFSVNPKTGRLIIIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT  +TPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGYTLDELMNDITGGRTPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            F FEKF G+   LTTQMKSVGE MA+GRT QES QKALR LE G SG+      +     
Sbjct: 362  FNFEKFSGTNHRLTTQMKSVGEVMAIGRTQQESLQKALRGLEVGASGFDPKVNLDDPEAL 421

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
              L+  L+    +R+  +  A + GM VD +  L+ ID+WFL Q +EL+ +E  +  + V
Sbjct: 422  TTLRRELKDAGGERIWYVADAFRAGMSVDGVFNLTNIDRWFLVQIEELVKLENDVAERGV 481

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
            + ++ +   ++KR+GF+D ++A      E E+R+ R S  + P YKRVDTCAAEF  +T 
Sbjct: 482  TALSTNYLRQLKRKGFADARLAALVGVAEAEIRKLRESYDLHPVYKRVDTCAAEFVTDTA 541

Query: 627  YMYSSYDFECESAPTQ-KKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNS 685
            YMYS+YD ECES P Q ++K+++LGGGPNRIGQGIEFDYCC H S +L+  GYETIM+N 
Sbjct: 542  YMYSTYDEECESQPHQDREKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVNC 601

Query: 686  NPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEH 745
            NPETVSTDYDTSDRLYFEP+T+EDVL ++ +E+P+G+IVQ+GGQTPLKL+         H
Sbjct: 602  NPETVSTDYDTSDRLYFEPVTLEDVLEIVRIEKPKGVIVQYGGQTPLKLA---------H 652

Query: 746  RLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEI 805
             L +A     V + GTSPDSID AEDRERF   ++ L ++QP      +   A+  A  I
Sbjct: 653  SLEAAG----VPVIGTSPDSIDRAEDRERFQQAVERLGLKQPANATVTTIDLAVEKAATI 708

Query: 806  GYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALA 865
            GYP+VVRPSYVLGGRAMEIVY D  L+ Y  NAV V    PVL+D++L DA+E+DVDA+ 
Sbjct: 709  GYPLVVRPSYVLGGRAMEIVYDDTDLLRYFHNAVSVSNNAPVLLDRFLDDAVEVDVDAVC 768

Query: 866  DSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMN 925
            D   NV+IGGIMEHIEQAGVHSGDSAC +P  T+S    D +     KLA  L V GLMN
Sbjct: 769  DG-ENVLIGGIMEHIEQAGVHSGDSACSLPAYTLSREIQDVMRQQVEKLAFELQVRGLMN 827

Query: 926  CQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPK 985
             Q+A+  + +VYL+E NPRA+RTVPFVSKA G  LAK AA VM GKSL   G T+EVIP 
Sbjct: 828  VQFAVKDN-EVYLIEVNPRAARTVPFVSKATGVALAKVAARVMVGKSLQQQGVTREVIPP 886

Query: 986  HVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVF 1045
            + SVKE VLPF KF G D +LGPEMRSTGEVMG+  +F  AFAKA + +  ++  SG   
Sbjct: 887  YYSVKEVVLPFNKFPGVDPILGPEMRSTGEVMGVGRTFAEAFAKAMLGSQSRMKKSGRAL 946

Query: 1046 LSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVA 1105
            LS+ +  K  +  +A   L  GF++ +T GTA  L   GI    V K+HEGRPH  D + 
Sbjct: 947  LSVREDDKDRVVDLAAKLLKHGFELDATHGTAVILGEAGINPRLVNKVHEGRPHIQDRIK 1006

Query: 1106 NGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRS 1156
            NG+   +V T++G    + D   +RR  L YKV   TT++G  A A ++ +
Sbjct: 1007 NGEYSYIVNTTAGRQAIE-DSKLIRRSALQYKVHYDTTLNGGFATAMSLNA 1056


>gi|83644090|ref|YP_432525.1| carbamoyl phosphate synthase large subunit [Hahella chejuensis KCTC
            2396]
 gi|83632133|gb|ABC28100.1| Carbamoylphosphate synthase large subunit [Hahella chejuensis KCTC
            2396]
          Length = 1075

 Score = 1240 bits (3209), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 626/1088 (57%), Positives = 801/1088 (73%), Gaps = 28/1088 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD+  ILI+GAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDINSILIIGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPAMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+    V +++EKERPDALLPTMGGQTALN A+ LA  G LE+YGVE+IGA  DA
Sbjct: 63   ATYIEPINWRTVAKIIEKERPDALLPTMGGQTALNCALDLAREGVLEQYGVEMIGATQDA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR+ F +AMK IG+ TP S I ++++E + + ++IG FP IIRP+FT+GG+GGGI
Sbjct: 123  IDKAEDRERFDKAMKAIGLATPRSAIAHSMEEALQVLDQIG-FPAIIRPSFTMGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYNKEEF  IC+ GL  S T ++L+++SL+GWKEYE+EV+RD  DN +IIC+IEN D MG
Sbjct: 182  AYNKEEFIEICERGLELSPTRELLIDESLIGWKEYEMEVVRDKKDNCIIICAIENFDAMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGVE GGSNVQF ++P  G ++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQIMRNASVAVLREIGVETGGSNVQFGMDPETGRMVVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKK-TPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL++GY+LD++ NDIT   TPASFEPSIDYVVTK+PR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAIGYTLDELSNDITGGVTPASFEPSIDYVVTKVPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            F FEKFP +   LTTQMKSVGE MA+GR FQES  KALR LE G +G+      ++D   
Sbjct: 362  FTFEKFPQANATLTTQMKSVGEVMAIGRNFQESLHKALRGLEVGSAGFE----PKVDLSS 417

Query: 507  EQ----LKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLL 562
            E     L   L+VP  +R+  I  A + GM V E++E + +D W+L Q ++LI  E  L 
Sbjct: 418  EDASDVLTRGLKVPGAERIWFIGDAFRAGMSVKEVYEHTKVDPWYLVQIEDLIKDEVTLS 477

Query: 563  TQSVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFE 622
              ++S++T D    +KR+GFSD+++A      EK +R++RL  G+ P +KRVDTCAAEF 
Sbjct: 478  NMALSDLTADRLRRLKRKGFSDQRLAELLGINEKALRKQRLEYGIKPVFKRVDTCAAEFA 537

Query: 623  ANTPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIM 682
            ++T YMYSSYD ECE+ P+ ++K++++GGGPNRIGQGIEFDYCC H +F+L+  GYETIM
Sbjct: 538  SSTAYMYSSYDEECEAQPSDREKIIVIGGGPNRIGQGIEFDYCCVHAAFALRDDGYETIM 597

Query: 683  MNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYL 742
            +N NPETVSTDYDTSDRLYFEP+T+EDVL ++ LE+P G+IV +GGQTPLKL+    + L
Sbjct: 598  INCNPETVSTDYDTSDRLYFEPITLEDVLAIVHLEKPRGVIVHYGGQTPLKLA----RGL 653

Query: 743  DEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIA 802
            +E  +P         I GT+PD+ID AEDRERF  ++  L + QP    A+S+ +AL+ A
Sbjct: 654  EEAGVP---------IIGTTPDAIDRAEDRERFQQMVVRLGLRQPPNATARSQEEALSKA 704

Query: 803  KEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVD 862
            KEIGYP+VVRPSYVLGGRAMEIVY +  L  Y+ +AV V  + PVL+D +L+ AIE+D+D
Sbjct: 705  KEIGYPLVVRPSYVLGGRAMEIVYDEVELQRYMRDAVRVSNDSPVLLDHFLNAAIEVDID 764

Query: 863  ALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCG 922
            A++D    VVIG IM+HIEQAGVHSGDSAC +P  ++ +   D +    IK+A  L V G
Sbjct: 765  AVSDG-EKVVIGAIMQHIEQAGVHSGDSACSLPPYSLPADVQDKMRETVIKMALELQVVG 823

Query: 923  LMNCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEV 982
            LMN Q A    G++Y++E NPRASRTVPFVSKAIG  LAK AAL M+GKSL   GFTKE+
Sbjct: 824  LMNVQLAY-QDGEIYVIEVNPRASRTVPFVSKAIGVSLAKVAALCMAGKSLEAQGFTKEI 882

Query: 983  IPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSG 1042
            IP   +VKE+V PF KF G D +LGPEM+STGEVMG+  SF  AFAKA  A G  LP  G
Sbjct: 883  IPGFYNVKESVFPFNKFPGVDPILGPEMKSTGEVMGVGKSFDEAFAKAAAAGGDFLPTGG 942

Query: 1043 TVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGD 1102
            TVFLS+ D  K     +A+    +GF+I++T+GTA  +E  GI V+R+ K+ EGRPH  D
Sbjct: 943  TVFLSVRDADKAGAVSLAEELNAVGFEIMATAGTAKAIEEAGIPVKRINKVREGRPHIVD 1002

Query: 1103 MVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTV 1162
             + N ++ +++ T+ G      D  ++R+  L YKV   TT++G  A   AI+  + + V
Sbjct: 1003 AIKNEEVDLIINTTEGRKA-IADSAEIRKSALQYKVTYTTTLTGGEAFCRAIKVGQDHAV 1061

Query: 1163 TMTALQDF 1170
                LQD 
Sbjct: 1062 NR--LQDI 1067


>gi|456863566|gb|EMF82033.1| carbamoyl-phosphate synthase, large subunit [Leptospira weilii
            serovar Topaz str. LT2116]
          Length = 1106

 Score = 1240 bits (3209), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 636/1119 (56%), Positives = 803/1119 (71%), Gaps = 58/1119 (5%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            +R D+R +LILG+GPIVIGQACEFDYSGTQA KALKE+G  VIL+NSNPATIMTDP LAD
Sbjct: 3    RRKDIRSVLILGSGPIVIGQACEFDYSGTQAAKALKEKGIRVILLNSNPATIMTDPDLAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TY+ PMT  +V+++LEKE+PDA+LPT+GGQTALNLA+A   +G LEKY VELIGAK+DA
Sbjct: 63   ATYVEPMTVSVVQKILEKEKPDAILPTVGGQTALNLALACNSAGLLEKYNVELIGAKVDA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            IKKAEDR+LFK+AM+ IGV+ P SG+ N L +   I  ++G  PLI+RPAFTLGGTGGGI
Sbjct: 123  IKKAEDRELFKKAMEKIGVRVPASGLANNLTDAAEIKKKLG-LPLIVRPAFTLGGTGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AY +E FE +   GL AS  SQVL+E+S+LGWKE+ELEVMRDLADNVVIICSIEN+DPMG
Sbjct: 182  AYTEETFEEVVSKGLKASPISQVLLEESVLGWKEFELEVMRDLADNVVIICSIENIDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAP QTL+DKEYQ LRD SIAIIREIGVE GGSN+QFAVNP +G+V+VIEMN
Sbjct: 242  VHTGDSITVAPQQTLSDKEYQNLRDMSIAIIREIGVETGGSNIQFAVNPANGDVIVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRF 447
            PRVSRSSALASKATGFPIAK+AA LS+GY+LD+I NDIT+ TPASFEPSIDYVVTK+PRF
Sbjct: 302  PRVSRSSALASKATGFPIAKIAALLSIGYTLDEINNDITRVTPASFEPSIDYVVTKVPRF 361

Query: 448  AFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSN-VKEL---- 502
            AFEKFPG++  L  QMK+VGEAMA+GRTF+ESFQKALRSLE    G+G     +EL    
Sbjct: 362  AFEKFPGTDDTLGVQMKAVGEAMAIGRTFKESFQKALRSLEIDRYGFGSDGYFQELLYAR 421

Query: 503  ----DWDWEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVE 558
                D   E +   L+ PN  R+  I  A  +   VD IH+L  +D+WFL Q ++L+ +E
Sbjct: 422  SLNSDQRKEWIDSFLKRPNDKRIFYIKLAFDEEYTVDRIHDLCKVDRWFLWQMEDLLKLE 481

Query: 559  QFLLTQSVSNMTKDDFYEVKRRGFSDKQIAFAT--------------------------K 592
            +    +  S +TK     +KR GFS++Q++F                            K
Sbjct: 482  KEYSEKGDSVLTK-----MKRAGFSNRQLSFLKNKKQILDLLDGDLRVDLKKTEIQNLLK 536

Query: 593  STEKEVREKRLSLGVIPSYKRVDTCAAEFEANTPYMYSSYDFECESAPTQKKKVLILGGG 652
            ++EKE+  +  S  ++P YKR+DTCA EFEA TPY YSSYD E ES  T  K V+ILGGG
Sbjct: 537  NSEKEIEAELGSKKILPVYKRIDTCAGEFEAYTPYFYSSYDEEDESDVTSAKSVMILGGG 596

Query: 653  PNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSNPETVSTDYDTSDRLYFEPLTVEDVLN 712
            PNRIGQGIEFDYCCC  S++LQ  G E+IM+NSNPETVSTDYDTSDRLYFEPLT+EDV  
Sbjct: 597  PNRIGQGIEFDYCCCQASYALQDLGIESIMVNSNPETVSTDYDTSDRLYFEPLTLEDVYR 656

Query: 713  VIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHRLPSASGDGLVRIWGTSPDSIDAAEDR 772
            +   E+PEG+I+QFGGQTPLKL+  + +           G   V+I GTSPDSID AEDR
Sbjct: 657  IYQNEKPEGVIIQFGGQTPLKLAKDLER----------KG---VKILGTSPDSIDRAEDR 703

Query: 773  ERFNAIIKELSIEQPKGGIAKSEADALAIAKEIGYPVVVRPSYVLGGRAMEIVYTDETLV 832
            +RF  ++++L +  P+ GIA S  +A  IA+++ YPV+VRPSYVLGGRAM I+  ++ L 
Sbjct: 704  KRFVEVLEKLKLNSPESGIATSMEEAREIAQKVAYPVLVRPSYVLGGRAMLIINEEKELD 763

Query: 833  TYLENAVEVDPERPVLIDKYLSDAIEIDVDALADSCGNVVIGGIMEHIEQAGVHSGDSAC 892
             Y+E A E+  +RP+LID +L DA+E+DVDAL D    V + GIMEHIE+AGVHSGDSAC
Sbjct: 764  RYMEKAEEISKDRPLLIDSFLEDAVEVDVDALCDG-KEVFVTGIMEHIEEAGVHSGDSAC 822

Query: 893  MIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNCQYAITTSGDVYLLEANPRASRTVPFV 952
            ++P +T+S + +D I   T+ LA  L V GL+N QYA+     +Y++E NPRASRTVPFV
Sbjct: 823  ILPPQTLSKNMMDEIRRATVDLALELQVKGLINIQYAVKNE-ILYIIEVNPRASRTVPFV 881

Query: 953  SKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRS 1012
            SKA+GHP+ KYA  +M G+SL  L   KE+    VSVKE VLPF KF G D +LGPEMRS
Sbjct: 882  SKALGHPIVKYATRIMMGESLKSLPLPKEMAFSQVSVKEVVLPFNKFPGVDTILGPEMRS 941

Query: 1013 TGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVFLSLNDLTKPHLERIAKAFLDIGFKIVS 1072
            TGEVMGI  +   AF K+Q  AG +LP  GTVF+S+ND TK  L    K   ++GF +++
Sbjct: 942  TGEVMGIASTVGEAFLKSQYMAGDELPSQGTVFVSINDKTKSELLSYIKDLSELGFNLIA 1001

Query: 1073 TSGTAHFLELKGIAVERVLKMH-EGRPHAGDMVANGQIQMMVITSSGDSLDQIDGLKLRR 1131
            TSGT  FL   GI   ++ K++ E  P A D +   +I  ++I +    + + D   +R+
Sbjct: 1002 TSGTHKFLSDNGILSSKINKVYDEIFPTALDYIRENKIH-LIINTPLSRVTRDDSFTIRQ 1060

Query: 1132 RGLAYKVPVITTVSGALANAEAIRSLKSNTVTMTALQDF 1170
              + +KVP +TT + A A  + +  +K+    + +LQ+ 
Sbjct: 1061 AAIRFKVPCLTTSNAAKALIKGMVEMKNKGFAIHSLQEI 1099


>gi|339326474|ref|YP_004686167.1| carbamoyl-phosphate synthase large subunit [Cupriavidus necator N-1]
 gi|338166631|gb|AEI77686.1| carbamoyl-phosphate synthase large chain [Cupriavidus necator N-1]
          Length = 1082

 Score = 1240 bits (3209), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 627/1085 (57%), Positives = 810/1085 (74%), Gaps = 32/1085 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILI+GAGPI+IGQACEFDYSG QACKAL+EEG++VIL+NSNPATIMTDP  AD
Sbjct: 3    KRTDIKSILIIGAGPIIIGQACEFDYSGAQACKALREEGFKVILVNSNPATIMTDPNTAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+T E+VE+++EKERPDA+LPTMGGQTALN A+ L   G LEKY VELIGA  +A
Sbjct: 63   VTYIEPITWEVVERIIEKERPDAILPTMGGQTALNCALDLYRHGVLEKYKVELIGASPEA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEI------GEFPLIIRPAFTLG 261
            I KAEDR  FK AM  IG+ +  SGI +++DE +++ + I      G +P++IRP+FTLG
Sbjct: 123  IDKAEDRQKFKDAMTKIGLGSAKSGIAHSMDEAMAVQSRIAQETGSGGYPIVIRPSFTLG 182

Query: 262  GTGGGIAYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIE 321
            G+GGGIAYN+EEFE ICK GL  S T ++L+E+SLLGWKEYE+EV+RD  DN +IICSIE
Sbjct: 183  GSGGGIAYNREEFEEICKRGLDLSPTRELLIEESLLGWKEYEMEVVRDKKDNCIIICSIE 242

Query: 322  NVDPMGVHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEV 381
            N+DPMG+HTGDSITVAPAQTLTDKEYQ LR+ S+A++REIGV+ GGSNVQF++NP DG +
Sbjct: 243  NLDPMGIHTGDSITVAPAQTLTDKEYQILRNASLAVLREIGVDTGGSNVQFSINPKDGRM 302

Query: 382  MVIEMNPRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYV 440
            +VIEMNPRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ N+IT   TPASFEPSIDYV
Sbjct: 303  IVIEMNPRVSRSSALASKATGFPIAKVAAKLAVGYTLDELKNEITGGATPASFEPSIDYV 362

Query: 441  VTKIPRFAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVK 500
            VTK+PRFAFEKFP ++  LTTQMKSVGE MA+GRTFQESFQKALR LE G  G     + 
Sbjct: 363  VTKVPRFAFEKFPQADSHLTTQMKSVGEVMAMGRTFQESFQKALRGLEVGVDG-----LD 417

Query: 501  ELDWDWEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQF 560
            E   D +++   +    PDR+  +  A + GM ++E++  + ID WFL Q +++I  E  
Sbjct: 418  EKSSDRDEVVEEIGEAGPDRIWYVGDAFRLGMSLEEVYAETDIDPWFLAQIEDIIKTEGL 477

Query: 561  LLTQSVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAE 620
            +  +++ +++  +   +K++GFSD+++A   K+  K VRE R++  V P YKRVDTCAAE
Sbjct: 478  VKARTLDSLSTAELRFLKQKGFSDRRLAKLLKTDAKAVREARIAQNVRPVYKRVDTCAAE 537

Query: 621  FEANTPYMYSSYDF---ECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAG 677
            F  NT YMYS+Y+    ECE+ PT KKK+++LGGGPNRIGQGIEFDYCC H + +L+  G
Sbjct: 538  FATNTAYMYSTYEAEHGECEAQPTDKKKIMVLGGGPNRIGQGIEFDYCCVHAALALREDG 597

Query: 678  YETIMMNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLP 737
            YETIM+N NPETVSTDYDTSDRLYFEPLT+EDVL ++D E+P G+IVQ+GGQTPLKL+L 
Sbjct: 598  YETIMVNCNPETVSTDYDTSDRLYFEPLTLEDVLEIVDKEKPVGVIVQYGGQTPLKLALD 657

Query: 738  IHQYLDEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEAD 797
            +           A+G   V I GTSPD IDAAEDRERF  +++EL + QP    A++E +
Sbjct: 658  LE----------ANG---VPIIGTSPDMIDAAEDRERFQKLLQELGLRQPPNRTARAEDE 704

Query: 798  ALAIAKEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAI 857
            AL +A+EIGYP+VVRPSYVLGGRAMEIV+    L  Y+  AV+V  + PVL+D++L+DAI
Sbjct: 705  ALRLAEEIGYPLVVRPSYVLGGRAMEIVHEPRDLERYMREAVKVSNDSPVLLDRFLNDAI 764

Query: 858  EIDVDALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKR 917
            E DVDA++D    V IGG+MEHIEQAGVHSGDSAC +P  ++S+  +  +   T  +A+ 
Sbjct: 765  ECDVDAISDG-KRVFIGGVMEHIEQAGVHSGDSACSLPPYSLSAETVAELKRQTAAMARA 823

Query: 918  LNVCGLMNCQYAITTS---GDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLN 974
            LNV GLMN Q+AI  +     VY+LE NPRASRTVP+VSKA G  LAK AA  M+G+SL+
Sbjct: 824  LNVVGLMNVQFAIQQNDGVDTVYVLEVNPRASRTVPYVSKATGLQLAKIAARCMAGQSLD 883

Query: 975  DLGFTKEVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAA 1034
            + G  +EVIP + SVKEAV PF KF G D +LGPEMRSTGEVMG+  +F  A  K+Q+AA
Sbjct: 884  EQGIGEEVIPPYYSVKEAVFPFNKFPGVDPVLGPEMRSTGEVMGVGKAFGEALFKSQLAA 943

Query: 1035 GQKLPLSGTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMH 1094
            G +LP  GTV +++ D  KP    +A+   D+G+ IV+T GTA  +E  GI V+ V K+ 
Sbjct: 944  GSRLPEKGTVLITVKDSDKPRAVGVARMLHDMGYPIVATRGTASAIEAAGIPVKTVNKVK 1003

Query: 1095 EGRPHAGDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAI 1154
            +GRPH  DM+ NG++ ++  T         D   +R   LA+++P  TT++GA A  E +
Sbjct: 1004 DGRPHIVDMIKNGELALVFTTVDETRTAIADSRSIRTSALAHRIPYYTTIAGARAAVEGL 1063

Query: 1155 RSLKS 1159
            + ++S
Sbjct: 1064 KHMQS 1068


>gi|309782464|ref|ZP_07677188.1| carbamoyl-phosphate synthase, large subunit [Ralstonia sp. 5_7_47FAA]
 gi|404396301|ref|ZP_10988096.1| carbamoyl-phosphate synthase large chain [Ralstonia sp. 5_2_56FAA]
 gi|308918801|gb|EFP64474.1| carbamoyl-phosphate synthase, large subunit [Ralstonia sp. 5_7_47FAA]
 gi|348614790|gb|EGY64329.1| carbamoyl-phosphate synthase large chain [Ralstonia sp. 5_2_56FAA]
          Length = 1081

 Score = 1240 bits (3209), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 623/1084 (57%), Positives = 807/1084 (74%), Gaps = 32/1084 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILI+GAGPI+IGQACEFDYSG QACKAL+EEG++V+L+NSNPATIMTDP  AD
Sbjct: 3    KRTDIKTILIIGAGPIIIGQACEFDYSGAQACKALREEGFKVVLVNSNPATIMTDPNTAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+T E+VE+++ KERPDA+LPTMGGQTALN A+ L   G L+KY VELIGA  +A
Sbjct: 63   VTYIEPITWEVVERIIAKERPDAILPTMGGQTALNCALDLHRHGVLKKYNVELIGASPEA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGE------FPLIIRPAFTLG 261
            I KAEDR  FK AM  IG+ +  SGI +++DE +++ ++I +      +P++IRP+FTLG
Sbjct: 123  IDKAEDRQKFKDAMTKIGLGSAKSGIAHSMDEAVAVQSQIAKETGTSGYPIVIRPSFTLG 182

Query: 262  GTGGGIAYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIE 321
            GTGGGIAYN+EEFE ICK GL  S T+++L+E+SLLGWKEYE+EV+RD ADN +I+CSIE
Sbjct: 183  GTGGGIAYNREEFEEICKRGLDLSPTNELLIEESLLGWKEYEMEVVRDRADNCIIVCSIE 242

Query: 322  NVDPMGVHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEV 381
            N+DPMG+HTGDSITVAPAQTLTDKEYQ LR+ S+A++REIGV+ GGSNVQF++NP DG +
Sbjct: 243  NLDPMGIHTGDSITVAPAQTLTDKEYQILRNASLAVLREIGVDTGGSNVQFSINPKDGRM 302

Query: 382  MVIEMNPRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYV 440
            +VIEMNPRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ N+IT   TPASFEPSIDYV
Sbjct: 303  IVIEMNPRVSRSSALASKATGFPIAKVAAKLAVGYTLDELKNEITGGATPASFEPSIDYV 362

Query: 441  VTKIPRFAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVK 500
            VTK+PRFAFEKFP ++  LTTQMKSVGE MA+GRTFQESFQKALR LE G  G     + 
Sbjct: 363  VTKVPRFAFEKFPQADSHLTTQMKSVGEVMAMGRTFQESFQKALRGLEVGVDG-----LD 417

Query: 501  ELDWDWEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQF 560
            E   D +++   +    PDR+  +  A + G+ +DE++  + +D WFL Q ++++  E  
Sbjct: 418  EKSTDRDEIIEEIGEAGPDRIWYLGDAFRLGLSIDEVYAETSVDPWFLAQIEDIVKTEAL 477

Query: 561  LLTQSVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAE 620
            + ++++ +++  +   +K++GFSD+++A  TK+T K VREKR++  V P YKRVDTCAAE
Sbjct: 478  VKSRTLESLSAAELRLLKQKGFSDRRLAKLTKTTAKAVREKRIAEKVRPVYKRVDTCAAE 537

Query: 621  FEANTPYMYSSYDF---ECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAG 677
            F  NT Y+YS+Y+    ECE+ PT  KK+++LGGGPNRIGQGIEFDYCC H + +L+  G
Sbjct: 538  FATNTAYLYSTYEAEHGECEAEPTGNKKIMVLGGGPNRIGQGIEFDYCCVHAALALREDG 597

Query: 678  YETIMMNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLP 737
            YETIM+N NPETVSTDYDTSDRLYFEP+T+EDVL ++D E+P G+IVQ+GGQTPLKL+L 
Sbjct: 598  YETIMVNCNPETVSTDYDTSDRLYFEPVTLEDVLEIVDKEKPVGVIVQYGGQTPLKLALD 657

Query: 738  IHQYLDEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEAD 797
            +           A+G   V I GTSPD IDAAEDRERF  ++  L + QP    A++E +
Sbjct: 658  LE----------ANG---VPIIGTSPDMIDAAEDRERFQKLLHSLGLRQPPNRTARAEDE 704

Query: 798  ALAIAKEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAI 857
            AL +A+EIGYP+VVRPSYVLGGRAMEIV+    L  Y+  AV+V  + PVL+D++L+DAI
Sbjct: 705  ALKLAEEIGYPLVVRPSYVLGGRAMEIVHEPRDLERYMREAVKVSNDSPVLLDRFLNDAI 764

Query: 858  EIDVDALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKR 917
            E DVD L+D    V IGG+MEHIEQAGVHSGDSAC +P  ++S + +D +   T  +AK 
Sbjct: 765  ECDVDCLSDG-KRVFIGGVMEHIEQAGVHSGDSACSLPPYSLSQATVDELKRQTAAMAKA 823

Query: 918  LNVCGLMNCQYAITTSGD---VYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLN 974
            LNV GLMN Q+AI   G    VY+LE NPRASRTVP+VSKA G PLAK AA  M+G+SL 
Sbjct: 824  LNVVGLMNVQFAIQQKGGEDIVYVLEVNPRASRTVPYVSKATGVPLAKVAARCMAGQSLE 883

Query: 975  DLGFTKEVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAA 1034
              G   EV+P + SVKEAV PF KF G D +LGPEMRSTGEVMG+  +F  A  K+Q+AA
Sbjct: 884  SQGVETEVVPAYYSVKEAVFPFNKFPGVDPVLGPEMRSTGEVMGVGKTFGEALFKSQLAA 943

Query: 1035 GQKLPLSGTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMH 1094
            G +LP  GTV +++ D  KP    +A+A   +G+ IV+T GTA  +E  GI V  V K+ 
Sbjct: 944  GSRLPEKGTVLMTVKDSDKPQAVEVARALHTLGYPIVATRGTASAIEAAGIPVRVVNKVK 1003

Query: 1095 EGRPHAGDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAI 1154
            +GRPH  DM+ N +I ++  T         D   +R+  LA +V   TT++GA A  E +
Sbjct: 1004 DGRPHIVDMIKNSEIALVFTTVDETRAAIADSRSIRQAALAQRVTYYTTIAGARAAVEGL 1063

Query: 1155 RSLK 1158
            + ++
Sbjct: 1064 KHMQ 1067


>gi|77360172|ref|YP_339747.1| carbamoyl phosphate synthase large subunit [Pseudoalteromonas
            haloplanktis TAC125]
 gi|76875083|emb|CAI86304.1| carbamoyl phosphate synthase, large subunit [Pseudoalteromonas
            haloplanktis TAC125]
          Length = 1072

 Score = 1240 bits (3208), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 621/1077 (57%), Positives = 788/1077 (73%), Gaps = 18/1077 (1%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILILGAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPDMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  E+VE+++EKE+PDA+LPTMGGQTALN A+ L + G L K+GVELIGA  DA
Sbjct: 63   ATYIEPIHWEVVEKIIEKEKPDAILPTMGGQTALNCALELDKHGVLAKHGVELIGATADA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAE+R+ F  AMK IG++ P + I +++DE   I   IG  P IIRP+FT+GGTGGG+
Sbjct: 123  IDKAENRERFDTAMKNIGLECPRAEIAHSMDEARDIITRIG-LPCIIRPSFTMGGTGGGV 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN EEFE IC+ GL  S T+++L+++SL+GWKEYE EV+RD  DN +I+C+IEN DPMG
Sbjct: 182  AYNLEEFEEICERGLDLSPTNELLIDESLIGWKEYETEVVRDKNDNCIIVCTIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGVE GGSNVQF +NP DG +++IEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQIMRNASMAVLREIGVETGGSNVQFGINPEDGRMVIIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT  KTPASFEP+IDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKIAAKLAVGYTLDELQNDITGGKTPASFEPAIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            F FEKF G+   LTTQMKSVGE MA+GR  QES QKALR LE G +G+      +     
Sbjct: 362  FNFEKFAGANDRLTTQMKSVGEVMAIGRNQQESLQKALRGLEVGATGFNPIVALDDPKAK 421

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
            E +   LR P  +R+  I  AM+ GM V++++EL+ I++WFL Q ++++  E  +    +
Sbjct: 422  EIIIRELREPGAERIWYIADAMRHGMSVEDVYELTKINRWFLVQIEDILKDEAKISDVGM 481

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
            + +  D   ++KR+GF+D +IA     +E E+R+KR  L ++P YKRVDTCAAEF ++T 
Sbjct: 482  AGLNADFLRKLKRKGFADPRIAEIAGVSEAEIRKKRHLLNILPVYKRVDTCAAEFSSDTA 541

Query: 627  YMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSN 686
            YMYS+YD ECE+ PT + K++++GGGPNRIGQGIEFDYCC H S +L+  GYETIM+N N
Sbjct: 542  YMYSTYDEECEANPTTRDKIMVIGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVNCN 601

Query: 687  PETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHR 746
            PETVSTDYDTSDRLYFEP+T+EDVL ++ +E+P G+IVQ+GGQTPLKL+          R
Sbjct: 602  PETVSTDYDTSDRLYFEPITLEDVLEIVRVEKPVGVIVQYGGQTPLKLA----------R 651

Query: 747  LPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEIG 806
               A+G   V + GTSPD+ID AEDRERF  +++ L++ QP+     S  +A+  + EIG
Sbjct: 652  ELEANG---VPVIGTSPDAIDRAEDRERFQQLVERLNLLQPENATVTSTEEAILKSVEIG 708

Query: 807  YPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALAD 866
            +P+VVRPSYVLGGRAMEIVY ++ L  Y+  AV+   E PVL+D++L +AIE+DVDA+ D
Sbjct: 709  FPLVVRPSYVLGGRAMEIVYDEQDLRRYMTEAVQASNEAPVLLDRFLDNAIEVDVDAICD 768

Query: 867  SCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNC 926
                V+IGGIMEHIEQAGVHSGDSAC +P  T+S    D +      +A  L V GLMN 
Sbjct: 769  G-EQVIIGGIMEHIEQAGVHSGDSACSLPAHTLSQEVQDVMRKQVTDMALELGVVGLMNT 827

Query: 927  QYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPKH 986
            Q+A+   G VYL+E NPRA+RTVPFVSKA G  LAK AA  M+G+SL   G TKEVIP +
Sbjct: 828  QFAV-KDGLVYLIEVNPRAARTVPFVSKATGVALAKVAARCMAGQSLASQGITKEVIPPY 886

Query: 987  VSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVFL 1046
             SVKE VLPF KFQG D + GPEMRSTGEVMG+  +F  AFAKAQ+ A   LP  G   L
Sbjct: 887  YSVKEVVLPFAKFQGVDPIRGPEMRSTGEVMGVGDTFAEAFAKAQLGASNTLPRGGRALL 946

Query: 1047 SLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVAN 1106
            S+ D  KP +  +A+   D+GF+I +T GTA  LE   IAV RV K+ EGRPH  D + +
Sbjct: 947  SVRDSDKPRIVELARIMTDLGFEIDATGGTAAALENADIAVRRVNKVFEGRPHILDRIKS 1006

Query: 1107 GQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTVT 1163
            G+   +V T+ G    + D   LRR  L +K    TT++ A AN  A ++     VT
Sbjct: 1007 GEYSYIVNTTEGRQAIE-DSKVLRRGALQHKTNYTTTLNAAFANCTANQADDRGKVT 1062


>gi|332534012|ref|ZP_08409863.1| carbamoyl-phosphate synthase large chain [Pseudoalteromonas
            haloplanktis ANT/505]
 gi|332036561|gb|EGI73028.1| carbamoyl-phosphate synthase large chain [Pseudoalteromonas
            haloplanktis ANT/505]
          Length = 1072

 Score = 1240 bits (3208), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 620/1077 (57%), Positives = 788/1077 (73%), Gaps = 18/1077 (1%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILILGAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  E+VE+++EKE+PDA+LPTMGGQTALN A+ L + G L K+GVELIGA  DA
Sbjct: 63   ATYIEPIHWEVVEKIIEKEKPDAVLPTMGGQTALNCALDLDKHGVLAKHGVELIGATADA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAE+R+ F  AMK IG++ P + I ++++E     + IG  P IIRP+FT+GGTGGG+
Sbjct: 123  IDKAENRERFDVAMKNIGLECPRAEIAHSMEEAKDTMSRIG-LPCIIRPSFTMGGTGGGV 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN EEFE IC+ GL  S T+++L+++SL+GWKEYE EV+RD  DN +I+C+IEN DPMG
Sbjct: 182  AYNMEEFEEICERGLDLSPTNELLIDESLIGWKEYETEVVRDKNDNCIIVCTIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGVE GGSNVQF +NP DG +++IEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQIMRNASMAVLREIGVETGGSNVQFGINPEDGRMVIIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITK-KTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT  KTPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKIAAKLAVGYTLDELQNDITGGKTPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            F FEKF G+   LTTQMKSVGE MA+GR  QES  KALR LE G +G+      +     
Sbjct: 362  FNFEKFAGANDRLTTQMKSVGEVMAIGRNQQESLHKALRGLEVGATGFNPIVALDDPKAK 421

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
            E++   LR P  +R+  I  AM+ GM VD+++EL+ +++WFL Q ++++  E  +    +
Sbjct: 422  EKIIRELREPGAERIWYIADAMRHGMSVDDVYELTKVNRWFLVQIEDILKDEAKIGEVGM 481

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
            + +  D   ++KR+GF+D +IA     +E E+R+KR  L ++P YKRVDTCAAEF ++T 
Sbjct: 482  AGLNADFLRKLKRKGFADPRIAEIAGVSEAEIRKKRHLLNILPVYKRVDTCAAEFSSDTA 541

Query: 627  YMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSN 686
            YMYSSYD ECE+ PT K K++++GGGPNRIGQGIEFDYCC H S +L+  GYETIM+N N
Sbjct: 542  YMYSSYDEECEANPTDKDKIMVIGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVNCN 601

Query: 687  PETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHR 746
            PETVSTDYDTSDRLYFEP+T+EDVL ++ +E+P+G+IVQ+GGQTPLKL+          R
Sbjct: 602  PETVSTDYDTSDRLYFEPITLEDVLEIVRVEKPKGVIVQYGGQTPLKLA----------R 651

Query: 747  LPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEIG 806
               A+G   V + GTSPD+ID AEDRERF  +++ L++ QP+     S  +AL  + EIG
Sbjct: 652  ELEANG---VPVIGTSPDAIDRAEDRERFQQLVERLNLLQPENATVTSTEEALLKSVEIG 708

Query: 807  YPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALAD 866
            +P+VVRPSYVLGGRAMEIVY ++ L  Y+  AV    E PVL+D++L +AIE+DVDA+ D
Sbjct: 709  FPLVVRPSYVLGGRAMEIVYDEDDLRRYMTEAVSASNEAPVLLDRFLDNAIEVDVDAICD 768

Query: 867  SCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNC 926
                V+IGGIMEHIEQAGVHSGDSAC +P  ++S    D +      +A  L V GLMN 
Sbjct: 769  G-EQVIIGGIMEHIEQAGVHSGDSACSLPAHSLSQEVQDVMRKQVTDMALELGVVGLMNT 827

Query: 927  QYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPKH 986
            Q+A+   G VYL+E NPRA+RTVPFVSKA G  LAK AA  M+G+SL   G TKEVIP +
Sbjct: 828  QFAV-KDGKVYLIEVNPRAARTVPFVSKATGVALAKVAARCMAGQSLASQGITKEVIPPY 886

Query: 987  VSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVFL 1046
             SVKE VLPF KFQG D + GPEMRSTGEVMG+  +F  AFAKAQ+ A   LP  G   L
Sbjct: 887  YSVKEVVLPFAKFQGVDPIRGPEMRSTGEVMGVGDTFAEAFAKAQLGASNTLPRGGRALL 946

Query: 1047 SLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVAN 1106
            S+ +  KP +  +AK   D+GF++ +T GTA  LE  GI V RV K++EGRPH  D + N
Sbjct: 947  SVRNSDKPRIVELAKIMTDLGFELDATGGTAQALEEAGIEVRRVNKVYEGRPHILDYIKN 1006

Query: 1107 GQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTVT 1163
             +   +V T+ G    + D   LRR  L  K    TT++ A AN  A ++   + VT
Sbjct: 1007 KEYSYIVNTTEGRQAIE-DSKVLRRGALQNKTNYTTTLNAAFANCTANKADDRSKVT 1062



 Score =  238 bits (606), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 154/422 (36%), Positives = 239/422 (56%), Gaps = 24/422 (5%)

Query: 67  KIDS-SAELSNGAA---SSKDQKL-GKRTDLRKILILGAGPIVIGQACEFDYSGTQACKA 121
           ++D+ +AE S+  A   SS D++     TD  KI+++G GP  IGQ  EFDY    A  A
Sbjct: 528 RVDTCAAEFSSDTAYMYSSYDEECEANPTDKDKIMVIGGGPNRIGQGIEFDYCCVHASLA 587

Query: 122 LKEEGYEVILINSNPATIMTDPGLADRTYITPMTPELVEQVLEKERPDALLPTMGGQTAL 181
           L+E+GYE I++N NP T+ TD   +DR Y  P+T E V +++  E+P  ++   GGQT L
Sbjct: 588 LREDGYETIMVNCNPETVSTDYDTSDRLYFEPITLEDVLEIVRVEKPKGVIVQYGGQTPL 647

Query: 182 NLAVALAESGALEKYGVELIGAKLDAIKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECI 241
            LA        LE  GV +IG   DAI +AEDR+ F+Q ++ + +  P +    + +E +
Sbjct: 648 KLA------RELEANGVPVIGTSPDAIDRAEDRERFQQLVERLNLLQPENATVTSTEEAL 701

Query: 242 SIANEIGEFPLIIRPAFTLGGTGGGIAYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKE 301
             + EIG FPL++RP++ LGG    I Y++++        ++AS  + VL+++ L    E
Sbjct: 702 LKSVEIG-FPLVVRPSYVLGGRAMEIVYDEDDLRRYMTEAVSASNEAPVLLDRFLDNAIE 760

Query: 302 YELEVMRDLADNVVIICSIENVDPMGVHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREI 361
            +++ + D  + V+I   +E+++  GVH+GDS    PA +L+ +    +R     +  E+
Sbjct: 761 VDVDAICD-GEQVIIGGIMEHIEQAGVHSGDSACSLPAHSLSQEVQDVMRKQVTDMALEL 819

Query: 362 GVECGGSNVQFAVNPVDGEVMVIEMNPRVSRSSALASKATGFPIAKMAAKLSVGYSLDQI 421
           GV  G  N QFAV   DG+V +IE+NPR +R+    SKATG  +AK+AA+   G SL   
Sbjct: 820 GV-VGLMNTQFAVK--DGKVYLIEVNPRAARTVPFVSKATGVALAKVAARCMAGQSL--A 874

Query: 422 PNDITKKTPASFEPSIDYVVTKIPRFAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQ 481
              ITK+    +     Y V ++    F KF G +P+   +M+S GE M +G TF E+F 
Sbjct: 875 SQGITKEVIPPY-----YSVKEVV-LPFAKFQGVDPIRGPEMRSTGEVMGVGDTFAEAFA 928

Query: 482 KA 483
           KA
Sbjct: 929 KA 930


>gi|326317399|ref|YP_004235071.1| carbamoyl-phosphate synthase large subunit [Acidovorax avenae subsp.
            avenae ATCC 19860]
 gi|323374235|gb|ADX46504.1| carbamoyl-phosphate synthase, large subunit [Acidovorax avenae subsp.
            avenae ATCC 19860]
          Length = 1086

 Score = 1240 bits (3208), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 641/1088 (58%), Positives = 803/1088 (73%), Gaps = 36/1088 (3%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KR+DL+ ILI+GAGPI+IGQACEFDYSG QACKAL+EEGY+VILINSNPATIMTDP  AD
Sbjct: 3    KRSDLKSILIIGAGPIIIGQACEFDYSGVQACKALREEGYKVILINSNPATIMTDPATAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+T + VE+++ KERPDA+LPTMGGQTALN A+ L  +G L KY VELIGA  +A
Sbjct: 63   VTYIEPITWQTVEKIIAKERPDAILPTMGGQTALNCALDLWRNGVLHKYKVELIGATPEA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  FK AM  IG+ +  SGI +++DE  ++   +G FP +IRP+FTLGGTGGGI
Sbjct: 123  IDKAEDRLKFKDAMTRIGLGSARSGIAHSMDEAWAVQRSVG-FPTVIRPSFTLGGTGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN EEFE ICK GL AS T+++L+E+SLLGWKEYE+EV+RD  DN +I+CSIEN+DPMG
Sbjct: 182  AYNPEEFETICKRGLEASPTNELLIEESLLGWKEYEMEVVRDKKDNCIIVCSIENLDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGV+ GGSNVQF+VNP DG ++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQIMRNASLAVLREIGVDTGGSNVQFSVNPKDGRMIVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT   TPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGYTLDELRNDITGGATPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            FAFEKFP ++  LTTQMKSVGE MA+GRTFQESFQKALR LE G  G     + E   D 
Sbjct: 362  FAFEKFPAADSRLTTQMKSVGEVMAMGRTFQESFQKALRGLEVGVDG-----MNEKTQDR 416

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFL--LTQ 564
            E L+  L  P P+R+  +  A   G+ VDE+H+L+ IDKWFL Q +E++ +E  L  L +
Sbjct: 417  ELLEKELGEPGPERIWYVGDAFAMGLSVDEVHDLTKIDKWFLVQIEEIVKIELDLDRLYE 476

Query: 565  -----SVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAA 619
                 +++ +       +K++GFSD+++A   K+ EK VRE R +L V P YKRVDTCAA
Sbjct: 477  EKGEGALAAIDAGTLRVLKKKGFSDRRLAKLLKTNEKAVREARRALNVRPVYKRVDTCAA 536

Query: 620  EFEANTPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYE 679
            EF  NT YMYS+Y+ ECE+AP+ KKK+++LGGGPNRIGQGIEFDYCC H + +++  GYE
Sbjct: 537  EFPTNTAYMYSTYEEECEAAPSSKKKIMVLGGGPNRIGQGIEFDYCCVHAALAMREDGYE 596

Query: 680  TIMMNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIH 739
            TIM+N NPETVSTDYDTSDRLYFEPLT+EDVL ++D E+P G+IVQ+GGQTPLKL+L + 
Sbjct: 597  TIMVNCNPETVSTDYDTSDRLYFEPLTLEDVLEIVDKEKPTGVIVQYGGQTPLKLALGLE 656

Query: 740  QYLDEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADAL 799
                      A G   V I GTSPD IDAAEDRERF  ++ +L + QP    A++EA+AL
Sbjct: 657  ----------AEG---VPIIGTSPDMIDAAEDRERFQKLLGDLGLRQPPNATARTEAEAL 703

Query: 800  AIAKEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEI 859
              A  +GYP+VVRPSYVLGGRAMEIV+    L  Y+  AV+V  + PVL+D++L+DAIE 
Sbjct: 704  EKAATLGYPLVVRPSYVLGGRAMEIVHEQRDLERYMREAVKVSNDSPVLLDRFLNDAIEC 763

Query: 860  DVDALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLN 919
            DVD L D  G V IGG+MEHIEQAGVHSGDSAC +P   +S + +D +   T  +A+ L+
Sbjct: 764  DVDCLRDPEGKVFIGGVMEHIEQAGVHSGDSACSLPPYYLSKATVDELKRQTAAMAEGLS 823

Query: 920  VCGLMNCQYAITTSGD-------VYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKS 972
            V GLMN Q+AI    +       +Y+LE NPRASRTVPFVSKA G  LAK AA  M+G+S
Sbjct: 824  VVGLMNVQFAIQEREENGAKQDVIYVLEVNPRASRTVPFVSKATGIQLAKVAARCMAGQS 883

Query: 973  LNDLGFTKEVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQI 1032
            L   G T+EV P + SVKEAV PF KF G D +LGPEM+STGEVMG+  +F  AF K+Q+
Sbjct: 884  LASQGITEEVTPPYFSVKEAVFPFVKFPGVDTILGPEMKSTGEVMGVGKTFGEAFVKSQL 943

Query: 1033 AAGQKLPLSGTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLK 1092
             AG KLP SG VFL++ +  KP    IA+    +GF +V+T GTA  +   G+ V+ V K
Sbjct: 944  GAGTKLPTSGKVFLTVKNSDKPRAVAIARELAAMGFDLVATKGTAAAIADAGVPVKVVNK 1003

Query: 1093 MHEGRPHAGDMVANGQIQMMVITSSGDSLDQI-DGLKLRRRGLAYKVPVITTVSGALANA 1151
            + EGRPH  DM+ N +I +MVI +  +  + I D   +R   L  +V   TT+ GA A  
Sbjct: 1004 VTEGRPHIVDMIKNDEI-VMVINTVEERRNAIADSRAIRTSSLQARVTTFTTIFGAEAAV 1062

Query: 1152 EAIRSLKS 1159
            E ++ L++
Sbjct: 1063 EGMKHLQN 1070


>gi|392411517|ref|YP_006448124.1| carbamoyl-phosphate synthase large subunit [Desulfomonile tiedjei DSM
            6799]
 gi|390624653|gb|AFM25860.1| carbamoyl-phosphate synthase large subunit [Desulfomonile tiedjei DSM
            6799]
          Length = 1080

 Score = 1239 bits (3207), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 632/1099 (57%), Positives = 802/1099 (72%), Gaps = 27/1099 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ IL++G+GPI+IGQACEFDYSGTQA KALKEEGY VIL+NSNPATIMTDP  +D
Sbjct: 3    KRTDIKSILMIGSGPIIIGQACEFDYSGTQALKALKEEGYRVILVNSNPATIMTDPEFSD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  +++  ++E+ERPDALLPT+GGQTALN AV L ++G L+KY VELIGA +DA
Sbjct: 63   ATYIEPLKLDILTTIIERERPDALLPTLGGQTALNKAVELHDAGVLQKYNVELIGAGIDA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            IKKAEDRDLFK AM  IG+  P SG    +D+   +A  IG FP +IRP+FTLGGTGG I
Sbjct: 123  IKKAEDRDLFKIAMTNIGLDLPESGYAENIDQAWEVARRIG-FPNVIRPSFTLGGTGGSI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AY++E+F  + + GL  S  +++LVE+S+LGWKE+ELEVMRD  DNVVIICSIEN DPMG
Sbjct: 182  AYSEEQFNDLARWGLEVSPVNRILVEESVLGWKEFELEVMRDGGDNVVIICSIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSIT+APAQTLTDKEYQ LRD SIAIIREIGV+ GGSN+QFAV+P +G V+VIEMN
Sbjct: 242  VHTGDSITIAPAQTLTDKEYQILRDQSIAIIREIGVDTGGSNIQFAVHPDNGRVVVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRF 447
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD+I NDIT KTPASFEP+IDYVVTKIPRF
Sbjct: 302  PRVSRSSALASKATGFPIAKIAAKLAVGYTLDEIANDITLKTPASFEPTIDYVVTKIPRF 361

Query: 448  AFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDWE 507
             FEKFP ++ +L TQMKSVGE MA+GRTF+ES QKA+RSLE     +G       D    
Sbjct: 362  TFEKFPSADRVLNTQMKSVGEVMAIGRTFKESLQKAIRSLEIDV--YGLDPRLPSDLSRG 419

Query: 508  QLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSVS 567
            ++   + +P P+R+  +  A++ G+ +++I+E S +D WFL Q  +++++E  L      
Sbjct: 420  EILQHVAIPTPERLWYLADAIRAGISLEDIYEASKVDPWFLGQIAQIVEMETDLARS--G 477

Query: 568  NMTKDDFYEVKR----RGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEA 623
             +  DD  E  R     GFSD ++A  T  TEK++RE R    VIP YKRVDTCAAEFEA
Sbjct: 478  RLEADDAAEALRDAKAYGFSDIRLAQITGKTEKDIRELREKNTVIPVYKRVDTCAAEFEA 537

Query: 624  NTPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMM 683
            +TPY+YSSY+ E ESAPT +KK++ILGGGPNRIGQGIEFDYCC H +F+L+   YETIM+
Sbjct: 538  HTPYLYSSYEDEDESAPTDRKKIVILGGGPNRIGQGIEFDYCCVHGAFALKEDNYETIMV 597

Query: 684  NSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLD 743
            N NPETVSTDYDTSDRLYFEPLT EDV+ ++  E+P+G+IVQFGGQTPLKL++ + +   
Sbjct: 598  NCNPETVSTDYDTSDRLYFEPLTFEDVVEIVKREKPDGVIVQFGGQTPLKLAVSLWE--- 654

Query: 744  EHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAK 803
                        V I GT PD+ID AEDR+RF  ++  L + QP   IA S A+ + +A+
Sbjct: 655  ----------AGVPIIGTLPDAIDRAEDRKRFKEMLIALGLNQPPNDIAHSYAEVMEVAE 704

Query: 804  EIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDA 863
             IGYP+VVRPSYVLGGRAMEIV+ ++ L  YL + V+  PE P+L+D YL+ A+EIDVDA
Sbjct: 705  RIGYPLVVRPSYVLGGRAMEIVHNEQDLKDYLTHVVQASPEHPILVDGYLTGAVEIDVDA 764

Query: 864  LADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGL 923
            +AD   NVVIGGIMEHIE+AGVHSGDS+C +P  ++    LD I   T  LA  L V GL
Sbjct: 765  VADG-ENVVIGGIMEHIEEAGVHSGDSSCSLPPYSLGRYHLDEIRRITRMLALELKVKGL 823

Query: 924  MNCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVI 983
            MN Q A+   G++++LE NPRASRT+PFVSKAIG PLAK  A VM+GK L++LGFTKE++
Sbjct: 824  MNLQLAL-KEGEIFVLEVNPRASRTIPFVSKAIGVPLAKIGARVMAGKKLHELGFTKEIL 882

Query: 984  PKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGT 1043
            P HVSVKEAV PF KF G DV+LGPEM+STGEVMGID  F  AF K+Q +    +P  G 
Sbjct: 883  PDHVSVKEAVFPFIKFPGVDVVLGPEMKSTGEVMGIDREFGPAFLKSQYSTDFPIPSGGM 942

Query: 1044 VFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRP-HAGD 1102
            VFLS+    K +   +A+   + GF  V T+GTA  LE  GI   RV K+HE R     D
Sbjct: 943  VFLSVAHADKANAVIVARRLKECGFTFVCTNGTAVALEAAGIPCTRVDKVHEKRDVDVID 1002

Query: 1103 MVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSL-KSNT 1161
            ++   +I ++ I +S D     D  ++R   L + VP  TT++GA A +  +R++ + +T
Sbjct: 1003 LIRQNKIALL-INTSADKKSMQDSYRIRLAALNHNVPYFTTIAGANALSLGLRAIRRGDT 1061

Query: 1162 VTMTALQDFFDVETASGSS 1180
              + +LQ++   +  S  S
Sbjct: 1062 FRVVSLQEYHGTKNISKDS 1080



 Score =  252 bits (644), Expect = 9e-64,   Method: Compositional matrix adjust.
 Identities = 151/412 (36%), Positives = 233/412 (56%), Gaps = 23/412 (5%)

Query: 79  ASSKDQKLGKRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPAT 138
           +S +D+     TD +KI+ILG GP  IGQ  EFDY       ALKE+ YE I++N NP T
Sbjct: 544 SSYEDEDESAPTDRKKIVILGGGPNRIGQGIEFDYCCVHGAFALKEDNYETIMVNCNPET 603

Query: 139 IMTDPGLADRTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGV 198
           + TD   +DR Y  P+T E V +++++E+PD ++   GGQT L LAV+L E+      GV
Sbjct: 604 VSTDYDTSDRLYFEPLTFEDVVEIVKREKPDGVIVQFGGQTPLKLAVSLWEA------GV 657

Query: 199 ELIGAKLDAIKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAF 258
            +IG   DAI +AEDR  FK+ +  +G+  PP+ I ++  E + +A  IG +PL++RP++
Sbjct: 658 PIIGTLPDAIDRAEDRKRFKEMLIALGLNQPPNDIAHSYAEVMEVAERIG-YPLVVRPSY 716

Query: 259 TLGGTGGGIAYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIIC 318
            LGG    I +N+++ +      + AS    +LV+  L G  E +++ + D  +NVVI  
Sbjct: 717 VLGGRAMEIVHNEQDLKDYLTHVVQASPEHPILVDGYLTGAVEIDVDAVAD-GENVVIGG 775

Query: 319 SIENVDPMGVHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVD 378
            +E+++  GVH+GDS    P  +L       +R  +  +  E+ V+ G  N+Q A+   +
Sbjct: 776 IMEHIEEAGVHSGDSSCSLPPYSLGRYHLDEIRRITRMLALELKVK-GLMNLQLALK--E 832

Query: 379 GEVMVIEMNPRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSI- 437
           GE+ V+E+NPR SR+    SKA G P+AK+ A++  G  L ++           F   I 
Sbjct: 833 GEIFVLEVNPRASRTIPFVSKAIGVPLAKIGARVMAGKKLHEL----------GFTKEIL 882

Query: 438 -DYVVTKIPRFAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLE 488
            D+V  K   F F KFPG + +L  +MKS GE M + R F  +F K+  S +
Sbjct: 883 PDHVSVKEAVFPFIKFPGVDVVLGPEMKSTGEVMGIDREFGPAFLKSQYSTD 934


>gi|350562981|ref|ZP_08931804.1| carbamoyl-phosphate synthase, large subunit [Thioalkalimicrobium
            aerophilum AL3]
 gi|349779847|gb|EGZ34188.1| carbamoyl-phosphate synthase, large subunit [Thioalkalimicrobium
            aerophilum AL3]
          Length = 1071

 Score = 1239 bits (3207), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 636/1088 (58%), Positives = 801/1088 (73%), Gaps = 25/1088 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILI+GAGPI+IGQACEFDYSG QACKALKEEGY V+L+NSNPATIM+DP LA 
Sbjct: 3    KRTDIKTILIIGAGPIIIGQACEFDYSGAQACKALKEEGYRVVLVNSNPATIMSDPDLAH 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+T ++VE++++KERPDA+LPTMGGQTALN  + LA +G L+KY +ELIGA  DA
Sbjct: 63   ATYIEPITWQVVEKIIDKERPDAILPTMGGQTALNCVLDLAHNGVLKKYNIELIGASEDA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAE+RD F+QAM  IG+  P S + + LDE   I  ++G FP +IRP+FTLGG+GGGI
Sbjct: 123  IDKAENRDRFRQAMTKIGLDMPYSEVAHNLDEAWQIQAKVG-FPTVIRPSFTLGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEFE ICK GL  S T ++L+E+S+LGWKEYE+EV+RD  DN +I+CSIEN DPMG
Sbjct: 182  AYNREEFEQICKFGLDLSPTKELLIEESILGWKEYEMEVIRDKKDNCIIVCSIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSIT+APAQTLTDKEYQ +R+ S+A++REIGVE GGSNVQFA+NP  G ++VIEMN
Sbjct: 242  VHTGDSITIAPAQTLTDKEYQIMRNASLAVLREIGVETGGSNVQFALNPETGRMIVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITK-KTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT   TPASFEPSIDYVVTK+PR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGYTLDELKNDITNGATPASFEPSIDYVVTKLPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWG----CSNVKEL 502
            F FEKFP ++  L+TQMKSVGE MA+GR F+ES QKALR LE G  G       +   E 
Sbjct: 362  FTFEKFPQAQARLSTQMKSVGEVMAMGRNFKESLQKALRGLETGMDGLNEMIDLATTDEK 421

Query: 503  DWDWEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLL 562
            D   + L+  LR P PDR+  +  A + G  V+++ E+S ID WFL Q  EL++ E+ +L
Sbjct: 422  DV-RDILRRELRDPGPDRIWYVADAFRAGWTVEQVFEVSKIDPWFLAQIAELVESERQIL 480

Query: 563  TQSVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFE 622
             + +  +      ++KR+GF+D +IA   K+    VR  R +LG+ P YKRVDTCAAEF 
Sbjct: 481  AKGLDALEAGFLKQLKRQGFADNRIAALLKTDSALVRRYRHTLGIRPVYKRVDTCAAEFA 540

Query: 623  ANTPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIM 682
             +T Y+YS+Y+ ECE+ P+ + K+++LGGGPNRIGQGIEFDYCC H + +L   GYETIM
Sbjct: 541  TSTAYLYSTYEDECEAEPSDRNKIMVLGGGPNRIGQGIEFDYCCVHAAMALSEDGYETIM 600

Query: 683  MNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYL 742
            +N NPETVSTDYDTSDRLYFEPLT+EDVL ++ +E+P+G+IVQ+GGQTPLKL+       
Sbjct: 601  VNCNPETVSTDYDTSDRLYFEPLTLEDVLEIVAIEKPKGVIVQYGGQTPLKLA------- 653

Query: 743  DEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIA 802
               R   A+G   V I GTSPDSID AEDRERF  ++ +L++ QP    A+ E +A+ +A
Sbjct: 654  ---RDLEAAG---VPIIGTSPDSIDLAEDRERFQQLLNKLNLRQPPNRTARREDEAVTLA 707

Query: 803  KEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVD 862
            KEIGYP+VVRPSYVLGGRAMEIVY +E L+ Y++ AV+V  + PVL+D++L DA+E+DVD
Sbjct: 708  KEIGYPLVVRPSYVLGGRAMEIVYCEEDLLRYMKFAVKVSNDSPVLLDRFLDDAVELDVD 767

Query: 863  ALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCG 922
            A+ D    VVIGG+MEHIEQAG+HSGDSAC +P  +I  S  D I     ++AK LNV G
Sbjct: 768  AICDG-EQVVIGGLMEHIEQAGIHSGDSACSLPPYSIKKSVQDEIRHQVEQMAKALNVVG 826

Query: 923  LMNCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEV 982
            LMN Q+A+    D+Y+LE NPRASRTVPFVSKAIG PLAK AA  M GKSL   GFT E+
Sbjct: 827  LMNTQFAV-KGDDIYVLEVNPRASRTVPFVSKAIGRPLAKIAARCMVGKSLASQGFTTEI 885

Query: 983  IPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSG 1042
            +PKH SVKEAV PF KF G D +LGPEM+STGEVMG+  +FP A+A AQ+AA   LP  G
Sbjct: 886  MPKHYSVKEAVFPFIKFLGVDPILGPEMKSTGEVMGVGANFPQAYANAQLAASTILPREG 945

Query: 1043 TVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGD 1102
              FLS+    +  +  +AK     GF IV+T GTA  L+  GI  E V K+ EGRP+  D
Sbjct: 946  KAFLSVRKADRVKVIELAKQLQAKGFSIVATRGTATSLQEAGIECELVNKVAEGRPNIVD 1005

Query: 1103 MVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTV 1162
             + N +IQ++V TS G S+   D   +RR  L +KV   TT++GA A   A+  L    V
Sbjct: 1006 AIKNEEIQLIVNTSDG-SVSIKDSSGIRREALMHKVCYTTTMAGAFATVAAMDYLDDQPV 1064

Query: 1163 TMTALQDF 1170
                LQD 
Sbjct: 1065 HR--LQDL 1070



 Score =  230 bits (586), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 153/454 (33%), Positives = 244/454 (53%), Gaps = 26/454 (5%)

Query: 36  YSNKKTGSLSLRSWPPQLTRYSRSR-VRASSAKIDS-SAELSNGAA----SSKDQKLGKR 89
           +++ +  +L L++    + RY  +  +R    ++D+ +AE +   A    + +D+   + 
Sbjct: 500 FADNRIAAL-LKTDSALVRRYRHTLGIRPVYKRVDTCAAEFATSTAYLYSTYEDECEAEP 558

Query: 90  TDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLADRT 149
           +D  KI++LG GP  IGQ  EFDY    A  AL E+GYE I++N NP T+ TD   +DR 
Sbjct: 559 SDRNKIMVLGGGPNRIGQGIEFDYCCVHAAMALSEDGYETIMVNCNPETVSTDYDTSDRL 618

Query: 150 YITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDAIK 209
           Y  P+T E V +++  E+P  ++   GGQT L LA        LE  GV +IG   D+I 
Sbjct: 619 YFEPLTLEDVLEIVAIEKPKGVIVQYGGQTPLKLA------RDLEAAGVPIIGTSPDSID 672

Query: 210 KAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGIAY 269
            AEDR+ F+Q +  + ++ PP+      DE +++A EIG +PL++RP++ LGG    I Y
Sbjct: 673 LAEDRERFQQLLNKLNLRQPPNRTARREDEAVTLAKEIG-YPLVVRPSYVLGGRAMEIVY 731

Query: 270 NKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMGVH 329
            +E+     K  +  S  S VL+++ L    E +++ + D  + VVI   +E+++  G+H
Sbjct: 732 CEEDLLRYMKFAVKVSNDSPVLLDRFLDDAVELDVDAICD-GEQVVIGGLMEHIEQAGIH 790

Query: 330 TGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMNPR 389
           +GDS    P  ++       +R     + + + V  G  N QFAV   D  + V+E+NPR
Sbjct: 791 SGDSACSLPPYSIKKSVQDEIRHQVEQMAKALNV-VGLMNTQFAVKGDD--IYVLEVNPR 847

Query: 390 VSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRFAF 449
            SR+    SKA G P+AK+AA+  VG SL       T+  P  +  S+   V     F F
Sbjct: 848 ASRTVPFVSKAIGRPLAKIAARCMVGKSLAS-QGFTTEIMPKHY--SVKEAV-----FPF 899

Query: 450 EKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKA 483
            KF G +P+L  +MKS GE M +G  F +++  A
Sbjct: 900 IKFLGVDPILGPEMKSTGEVMGVGANFPQAYANA 933


>gi|418718405|ref|ZP_13277938.1| carbamoyl-phosphate synthase, large subunit [Leptospira
            borgpetersenii str. UI 09149]
 gi|421093880|ref|ZP_15554604.1| carbamoyl-phosphate synthase, large subunit [Leptospira
            borgpetersenii str. 200801926]
 gi|410363863|gb|EKP14892.1| carbamoyl-phosphate synthase, large subunit [Leptospira
            borgpetersenii str. 200801926]
 gi|410744767|gb|EKQ93503.1| carbamoyl-phosphate synthase, large subunit [Leptospira
            borgpetersenii str. UI 09149]
          Length = 1106

 Score = 1239 bits (3207), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 633/1119 (56%), Positives = 805/1119 (71%), Gaps = 58/1119 (5%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            +R D+R +LILG+GPIVIGQACEFDYSGTQA KALKE+G  VIL+NSNPATIMTDP LAD
Sbjct: 3    RREDIRSVLILGSGPIVIGQACEFDYSGTQAAKALKEKGIRVILLNSNPATIMTDPDLAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TY+ PMT  +V+++LEKE+PDA+LPT+GGQTALNLA+A   +G LEKY VELIGAK+DA
Sbjct: 63   ATYVEPMTVPVVQKILEKEKPDAILPTVGGQTALNLALACNGAGLLEKYNVELIGAKVDA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            IKKAEDR+LFK+AM+ IGV+ P SG+ N L +   I  ++G  PLI+RPAFTLGGTGGGI
Sbjct: 123  IKKAEDRELFKKAMEKIGVRVPASGLANNLTDAAEIKKKLG-LPLIVRPAFTLGGTGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AY +E FE +   GL AS  SQVL+E+S+LGWKE+ELEVMRDLADNVVIICSIEN+DPMG
Sbjct: 182  AYTEETFEEVVSKGLKASPISQVLLEESVLGWKEFELEVMRDLADNVVIICSIENIDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAP QTL+DKEYQ LRD SIAIIREIGVE GGSN+QFAVNP +G+V+VIEMN
Sbjct: 242  VHTGDSITVAPQQTLSDKEYQNLRDMSIAIIREIGVETGGSNIQFAVNPANGDVIVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRF 447
            PRVSRSSALASKATGFPIAK+AA LS+GY+LD+I NDIT+ TPASFEPSIDYVVTK+PRF
Sbjct: 302  PRVSRSSALASKATGFPIAKIAALLSIGYTLDEIKNDITRVTPASFEPSIDYVVTKVPRF 361

Query: 448  AFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSN-VKEL---- 502
            AFEKFPG++  L  QMK+VGEAMA+GRTF+ESFQKALRSLE    G+G     +EL    
Sbjct: 362  AFEKFPGTDDTLGVQMKAVGEAMAIGRTFKESFQKALRSLEIDRYGFGSDGYFQELLYTR 421

Query: 503  ----DWDWEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVE 558
                D   E +   L+ PN  R+  +  A  +G  V++IH+L  +D+WFL Q ++L+ +E
Sbjct: 422  SLNSDQRKEWIDSFLKRPNDKRIFYVKLAFDEGYTVEQIHDLCKMDRWFLWQMEDLLKLE 481

Query: 559  QFLLTQSVSNMTKDDFYEVKRRGFSDKQIAFAT--------------------------K 592
            +    +  S + K     +KR GFS++Q++F                            K
Sbjct: 482  REYSEKGDSVLAK-----MKRAGFSNRQLSFLKNKKRILDLLDSDLRVDLKKTEIQNILK 536

Query: 593  STEKEVREKRLSLGVIPSYKRVDTCAAEFEANTPYMYSSYDFECESAPTQKKKVLILGGG 652
             +E+E+  +  S  ++P YKR+DTCA EFEA TPY YSSYD E ES  T  K V+ILGGG
Sbjct: 537  KSEEEIETELGSEKILPVYKRIDTCAGEFEAYTPYFYSSYDEEDESDVTSTKSVMILGGG 596

Query: 653  PNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSNPETVSTDYDTSDRLYFEPLTVEDVLN 712
            PNRIGQGIEFDYCCC  S++LQ  G E+IM+NSNPETVSTDYDTSDRLYFEPLT+EDV  
Sbjct: 597  PNRIGQGIEFDYCCCQASYALQDLGVESIMVNSNPETVSTDYDTSDRLYFEPLTLEDVYR 656

Query: 713  VIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHRLPSASGDGLVRIWGTSPDSIDAAEDR 772
            +   E+PEG+I+QFGGQTPLKL+  + +           G   V+I GTSPDSID AEDR
Sbjct: 657  IYQNEKPEGVIIQFGGQTPLKLAKDLER----------KG---VKILGTSPDSIDRAEDR 703

Query: 773  ERFNAIIKELSIEQPKGGIAKSEADALAIAKEIGYPVVVRPSYVLGGRAMEIVYTDETLV 832
            +RF  ++++L +  P+ GIA S  +A  IA+ + YP++VRPSYVLGGRAM I+  ++ L 
Sbjct: 704  KRFVEVLEKLKLRSPESGIATSMEEAREIAQNVKYPILVRPSYVLGGRAMLIINEEKELD 763

Query: 833  TYLENAVEVDPERPVLIDKYLSDAIEIDVDALADSCGNVVIGGIMEHIEQAGVHSGDSAC 892
             Y+E A E+  +RP+LID +L DA+E+DVDAL D    V + GIMEHIE+AG+HSGDSAC
Sbjct: 764  RYMEKAEEISKDRPLLIDSFLEDAVEVDVDALCDG-KEVFVTGIMEHIEEAGIHSGDSAC 822

Query: 893  MIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNCQYAITTSGDVYLLEANPRASRTVPFV 952
            ++P +T+S + +D I   T+ LA  L V GL+N QYA+     +Y++E NPRASRTVPFV
Sbjct: 823  ILPPQTLSKNMMDEIRKATVDLALELQVKGLINIQYAVKNE-ILYVIEVNPRASRTVPFV 881

Query: 953  SKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRS 1012
            SKA+GHP+ KYA  V+ G+SL +L   KE+    VSVKE VLPF KF G D +LGPEMRS
Sbjct: 882  SKALGHPIVKYATRVIMGESLKNLPLPKEMAFSQVSVKEVVLPFNKFPGVDTILGPEMRS 941

Query: 1013 TGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVFLSLNDLTKPHLERIAKAFLDIGFKIVS 1072
            TGEVMGI  +   AF K+Q  AG +LP  GTVF+S+ND TK  L    K   D+GF +++
Sbjct: 942  TGEVMGIASTVGEAFLKSQYMAGDELPSQGTVFVSINDKTKSELLSYIKDLSDLGFNLIA 1001

Query: 1073 TSGTAHFLELKGIAVERVLKMHEG-RPHAGDMVANGQIQMMVITSSGDSLDQIDGLKLRR 1131
            TSGT  FL   GI   ++ K+++G  P A D +   +I  ++I +    + + D   +R+
Sbjct: 1002 TSGTHKFLSDNGILSSKINKVYDGIFPTALDYIRENKIH-LIINTPLSRVTRDDSFTIRQ 1060

Query: 1132 RGLAYKVPVITTVSGALANAEAIRSLKSNTVTMTALQDF 1170
              + +KVP +TT + A A  + +  +K+   T+ +LQ+ 
Sbjct: 1061 AAIRFKVPCLTTSNAAKALIKGMVEMKNKGFTVHSLQEI 1099


>gi|393776730|ref|ZP_10365024.1| carbamoyl phosphate synthase large subunit [Ralstonia sp. PBA]
 gi|392716087|gb|EIZ03667.1| carbamoyl phosphate synthase large subunit [Ralstonia sp. PBA]
          Length = 1079

 Score = 1239 bits (3206), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 625/1085 (57%), Positives = 805/1085 (74%), Gaps = 29/1085 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ +LI+GAGPI+IGQACEFDYSG QACKAL+EEGY+VIL+NSNPATIMTDP  AD
Sbjct: 3    KRTDIQSVLIIGAGPIIIGQACEFDYSGAQACKALREEGYKVILVNSNPATIMTDPNTAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+T E+VE ++ KERPDA+LPTMGGQTALN A+ L   G L KY VELIGA  +A
Sbjct: 63   VTYIEPITWEVVESIIAKERPDAILPTMGGQTALNCALDLHRHGVLAKYNVELIGASPEA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGE------FPLIIRPAFTLG 261
            I KAEDR  FK AM  IG+ +  SGI +++++ +++   I E      +P++IRP+FTLG
Sbjct: 123  IDKAEDRQKFKDAMTKIGLGSAKSGIAHSMEDALAVQVRIAEETGTSGYPIVIRPSFTLG 182

Query: 262  GTGGGIAYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIE 321
            GTGGGIAYN+EEFE ICK GL  S T ++L+E+SLLGWKEYE+EV+RD ADN +I+CSIE
Sbjct: 183  GTGGGIAYNREEFEEICKRGLDLSPTRELLIEESLLGWKEYEMEVVRDKADNCIIVCSIE 242

Query: 322  NVDPMGVHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEV 381
            N+DPMGVHTGDSITVAPAQTLTDKEYQ LR+ S+A++REIGV+ GGSNVQF++NP DG +
Sbjct: 243  NLDPMGVHTGDSITVAPAQTLTDKEYQILRNASLAVLREIGVDTGGSNVQFSINPKDGRM 302

Query: 382  MVIEMNPRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYV 440
            +VIEMNPRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ N+IT  +TPASFEPSIDYV
Sbjct: 303  IVIEMNPRVSRSSALASKATGFPIAKVAAKLAVGYTLDELRNEITGGQTPASFEPSIDYV 362

Query: 441  VTKIPRFAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVK 500
            VTKIPRFAFEKFP ++  LTTQMKSVGE MA+GRTFQESFQKALR LE G  G     + 
Sbjct: 363  VTKIPRFAFEKFPQADSHLTTQMKSVGEVMAIGRTFQESFQKALRGLEVGVDG-----LD 417

Query: 501  ELDWDWEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQF 560
            E   D +++   +  P PDR+  +  A + GM ++E++  + ID WFL Q +E+I +E+ 
Sbjct: 418  EKTTDRDEIVEEIGEPGPDRIWYLGDAFRLGMSIEEVYAETSIDPWFLAQIEEIIKLEKT 477

Query: 561  LLTQSVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAE 620
            L T+ + +++KD+   +K++GFSD+++A    +   +VR  R  L V P YKRVDTCAAE
Sbjct: 478  LATRKLDSLSKDELRFLKQKGFSDRRLAKLMSAEADDVRALRKQLDVRPVYKRVDTCAAE 537

Query: 621  FEANTPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYET 680
            F  NT YMYS+Y+ ECE+APT KKK+++LGGGPNRIGQGIEFDYCC H + +L+  GYET
Sbjct: 538  FATNTAYMYSTYEDECEAAPTDKKKIMVLGGGPNRIGQGIEFDYCCVHAALALREDGYET 597

Query: 681  IMMNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQ 740
            IM+N NPETVSTDYDTSDRLYFEPLT+EDVL +++ E+P G+IVQ+GGQTPLKL+L    
Sbjct: 598  IMVNCNPETVSTDYDTSDRLYFEPLTLEDVLEIVEKEKPVGVIVQYGGQTPLKLALD--- 654

Query: 741  YLDEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALA 800
             L+ + +P         I GTSPD IDAAEDRERF  ++  L++ QP    A++E +AL 
Sbjct: 655  -LERNGVP---------IIGTSPDMIDAAEDRERFQKLLHTLNLRQPPNRTARTEEEALT 704

Query: 801  IAKEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEID 860
            +A EIGYP+VVRPSYVLGGRAMEIV+    L  Y+  AV+V  + PVL+D++L+DAIE D
Sbjct: 705  LAAEIGYPLVVRPSYVLGGRAMEIVHEPRDLERYMREAVKVSHDSPVLLDRFLNDAIECD 764

Query: 861  VDALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNV 920
            VD ++D    V IGG+M+HIEQAGVHSGDSAC +P  ++S   +  +   T ++AK LNV
Sbjct: 765  VDCISDG-KRVFIGGVMQHIEQAGVHSGDSACSLPPYSLSPETVAELKRQTTEMAKALNV 823

Query: 921  CGLMNCQYAITTS---GDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLG 977
             GLMN Q+AI  +     VY+LE NPRASRTVP+VSKA    LAK AA  M+G+SL++ G
Sbjct: 824  VGLMNVQFAIQQNDGKDTVYVLEVNPRASRTVPYVSKATSLSLAKIAARCMAGQSLDEQG 883

Query: 978  FTKEVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQK 1037
               EV+P + SVKEAV PF KF G D +LGPEMRSTGEVMG+  +F  A  K+Q+AAG +
Sbjct: 884  IANEVVPPYYSVKEAVFPFNKFPGVDPVLGPEMRSTGEVMGVGRTFGEALFKSQLAAGSR 943

Query: 1038 LPLSGTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGR 1097
            LP SGTV L++ D  KP    +A+   ++G+ +V+T GTA  +E  G+ V  V K+ +GR
Sbjct: 944  LPESGTVLLTVKDSDKPMAVEVARMLHEMGYTLVATRGTASAIEAAGVPVRVVNKVKDGR 1003

Query: 1098 PHAGDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSL 1157
            PH  DM+ NG++ ++  T         D   +R   LA +V   TT++GA A  E ++ L
Sbjct: 1004 PHIVDMIKNGELALVFTTVDETRGAIADSRSIRTSALANRVTYYTTMAGARAAVEGLKHL 1063

Query: 1158 KSNTV 1162
            ++  V
Sbjct: 1064 QNMEV 1068


>gi|113868420|ref|YP_726909.1| carbamoyl phosphate synthase large subunit [Ralstonia eutropha H16]
 gi|113527196|emb|CAJ93541.1| carbamoylphosphate synthase, large subunit [Ralstonia eutropha H16]
          Length = 1082

 Score = 1239 bits (3206), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 627/1085 (57%), Positives = 810/1085 (74%), Gaps = 32/1085 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILI+GAGPI+IGQACEFDYSG QACKAL+EEG++VIL+NSNPATIMTDP  AD
Sbjct: 3    KRTDIKSILIIGAGPIIIGQACEFDYSGAQACKALREEGFKVILVNSNPATIMTDPNTAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+T E+VE+++EKERPDA+LPTMGGQTALN A+ L   G L+KY VELIGA  +A
Sbjct: 63   VTYIEPITWEVVERIIEKERPDAILPTMGGQTALNCALDLHRHGVLDKYKVELIGASPEA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEI------GEFPLIIRPAFTLG 261
            I KAEDR  FK AM  IG+ +  SGI +++DE +++ + I      G +P++IRP+FTLG
Sbjct: 123  IDKAEDRQKFKDAMTKIGLGSAKSGIAHSMDEAMAVQSRIAQETGTGGYPIVIRPSFTLG 182

Query: 262  GTGGGIAYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIE 321
            G+GGGIAYN+EEFE ICK GL  S T ++L+E+SLLGWKEYE+EV+RD  DN +IICSIE
Sbjct: 183  GSGGGIAYNREEFEEICKRGLDLSPTRELLIEESLLGWKEYEMEVVRDKKDNCIIICSIE 242

Query: 322  NVDPMGVHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEV 381
            N+DPMG+HTGDSITVAPAQTLTDKEYQ LR+ S+A++REIGV+ GGSNVQF++NP DG +
Sbjct: 243  NLDPMGIHTGDSITVAPAQTLTDKEYQILRNASLAVLREIGVDTGGSNVQFSINPKDGRM 302

Query: 382  MVIEMNPRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYV 440
            +VIEMNPRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ N+IT   TPASFEPSIDYV
Sbjct: 303  IVIEMNPRVSRSSALASKATGFPIAKVAAKLAVGYTLDELKNEITGGATPASFEPSIDYV 362

Query: 441  VTKIPRFAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVK 500
            VTK+PRFAFEKFP ++  LTTQMKSVGE MA+GRTFQESFQKALR LE G  G     + 
Sbjct: 363  VTKVPRFAFEKFPQADSHLTTQMKSVGEVMAMGRTFQESFQKALRGLEVGVDG-----LD 417

Query: 501  ELDWDWEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQF 560
            E   D +++   +    PDR+  +  A + GM ++E++  + ID WFL Q +++I  E  
Sbjct: 418  EKSTDRDEVVEEIGEAGPDRIWYVGDAFRLGMSLEEVYAETDIDPWFLAQIEDIIKTEGL 477

Query: 561  LLTQSVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAE 620
            +  +++ +++  +   +K++GFSD+++A   K+  K VRE R++  V P YKRVDTCAAE
Sbjct: 478  VKARTLESLSTAELRFLKQKGFSDRRLAKLLKTDAKAVREARIAQNVRPVYKRVDTCAAE 537

Query: 621  FEANTPYMYSSYDF---ECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAG 677
            F  NT YMYS+Y+    ECE+ PT KKK+++LGGGPNRIGQGIEFDYCC H + +L+  G
Sbjct: 538  FATNTAYMYSTYEAEHGECEAQPTDKKKIMVLGGGPNRIGQGIEFDYCCVHAALALREDG 597

Query: 678  YETIMMNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLP 737
            YETIM+N NPETVSTDYDTSDRLYFEPLT+EDVL ++ LE+P G+IVQ+GGQTPLKL+L 
Sbjct: 598  YETIMVNCNPETVSTDYDTSDRLYFEPLTLEDVLEIVALEKPVGVIVQYGGQTPLKLALD 657

Query: 738  IHQYLDEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEAD 797
            +           A+G   V I GTSPD IDAAEDRERF  +++EL + QP    A++E +
Sbjct: 658  LE----------ANG---VPIIGTSPDMIDAAEDRERFQKLLQELGLRQPPNRTARAEDE 704

Query: 798  ALAIAKEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAI 857
            AL +A+EIGYP+VVRPSYVLGGRAMEIV+    L  Y+  AV+V  + PVL+D++L+DAI
Sbjct: 705  ALRLAEEIGYPLVVRPSYVLGGRAMEIVHEPRDLERYMREAVKVSNDSPVLLDRFLNDAI 764

Query: 858  EIDVDALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKR 917
            E DVDA++D    V IGG+MEHIEQAGVHSGDSAC +P  ++S+  +  +   T  +AK 
Sbjct: 765  ECDVDAISDG-KRVFIGGVMEHIEQAGVHSGDSACSLPPYSLSAETVAELKRQTAAMAKA 823

Query: 918  LNVCGLMNCQYAITTS---GDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLN 974
            LNV GLMN Q+AI  +     VY+LE NPRASRTVP+VSKA G  LAK AA  M+G+SL+
Sbjct: 824  LNVIGLMNVQFAIQQNDGVDTVYVLEVNPRASRTVPYVSKATGLQLAKIAARCMAGQSLD 883

Query: 975  DLGFTKEVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAA 1034
            + G  +EVIP + SVKEAV PF KF G D +LGPEMRSTGEVMG+  +F  A  K+Q+AA
Sbjct: 884  EQGIGEEVIPPYYSVKEAVFPFNKFPGVDPVLGPEMRSTGEVMGVGKAFGEALFKSQLAA 943

Query: 1035 GQKLPLSGTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMH 1094
            G +LP  GTV +++ D  KP    +A+   D+G+ IV+T GTA  +E  GI V+ V K+ 
Sbjct: 944  GSRLPEKGTVLITVKDSDKPRAVGVARMLHDMGYPIVATRGTASAIEAAGIPVKTVNKVK 1003

Query: 1095 EGRPHAGDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAI 1154
            +GRPH  DM+ NG++ ++  T         D   +R   LA+++P  TT++GA A  E +
Sbjct: 1004 DGRPHIVDMIKNGELALVFTTVDETRTAIADSRSIRTSALAHRIPYYTTIAGARAAVEGL 1063

Query: 1155 RSLKS 1159
            + ++S
Sbjct: 1064 KHMQS 1068


>gi|194290080|ref|YP_002005987.1| carbamoyl phosphate synthase large subunit [Cupriavidus taiwanensis
            LMG 19424]
 gi|193223915|emb|CAQ69924.1| Carbamoyl-phosphate synthase large chain (Carbamoyl-phosphate
            synthetase ammonia chain) [Cupriavidus taiwanensis LMG
            19424]
          Length = 1082

 Score = 1239 bits (3206), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 625/1085 (57%), Positives = 807/1085 (74%), Gaps = 32/1085 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILI+GAGPI+IGQACEFDYSG QACKAL+EEG++VIL+NSNPATIMTDP  AD
Sbjct: 3    KRTDIKSILIIGAGPIIIGQACEFDYSGAQACKALREEGFKVILVNSNPATIMTDPATAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+T E+VE+++EKERPDA+LPTMGGQTALN A+ L   G L+KY VELIGA  +A
Sbjct: 63   VTYIEPITWEVVERIIEKERPDAILPTMGGQTALNCALDLHRHGVLDKYKVELIGASPEA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGE------FPLIIRPAFTLG 261
            I KAEDR  FK AM  IG+ +  SGI +++DE +++   I +      +P++IRP+FTLG
Sbjct: 123  IDKAEDRQKFKDAMTKIGLGSAKSGIAHSMDEAVAVQARIAQDTGTSGYPIVIRPSFTLG 182

Query: 262  GTGGGIAYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIE 321
            GTGGGIAYN+EEFE ICK GL  S T ++L+E+SLLGWKEYE+EV+RD  DN +IICSIE
Sbjct: 183  GTGGGIAYNREEFEEICKRGLDLSPTRELLIEESLLGWKEYEMEVVRDKQDNCIIICSIE 242

Query: 322  NVDPMGVHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEV 381
            N+DPMG+HTGDSITVAPAQTLTDKEYQ LR+ S+A++REIGV+ GGSNVQF++NP DG +
Sbjct: 243  NLDPMGIHTGDSITVAPAQTLTDKEYQILRNASLAVLREIGVDTGGSNVQFSINPKDGRM 302

Query: 382  MVIEMNPRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYV 440
            +VIEMNPRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ N+IT   TPASFEPSIDYV
Sbjct: 303  IVIEMNPRVSRSSALASKATGFPIAKVAAKLAVGYTLDELKNEITGGATPASFEPSIDYV 362

Query: 441  VTKIPRFAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVK 500
            VTK+PRFAFEKFP ++  LTTQMKSVGE MA+GRTFQESFQKALR LE G  G     + 
Sbjct: 363  VTKVPRFAFEKFPQADSHLTTQMKSVGEVMAMGRTFQESFQKALRGLEVGVDG-----LD 417

Query: 501  ELDWDWEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQF 560
            E   D +++   +  P PDR+  +  A + GM ++E++  + ID WFL Q ++++  E  
Sbjct: 418  EKSTDRDEIVEEIGEPGPDRIWYVGDAFRLGMSLEEVYHETAIDPWFLAQIEDIVKTEGL 477

Query: 561  LLTQSVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAE 620
            + ++++ +++  +   +K++GFSD+++A   K+  K VR  R++  V P YKRVDTCAAE
Sbjct: 478  VKSRTLDSLSTAELRFLKQKGFSDRRLARLLKTDAKAVRAARIAQNVRPVYKRVDTCAAE 537

Query: 621  FEANTPYMYSSYDF---ECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAG 677
            F  NT YMYS+Y+    ECE+ PT KKK+++LGGGPNRIGQGIEFDYCC H + +L+  G
Sbjct: 538  FATNTAYMYSTYEAEHGECEANPTDKKKIMVLGGGPNRIGQGIEFDYCCVHAALALREDG 597

Query: 678  YETIMMNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLP 737
            YETIM+N NPETVSTDYDTSDRLYFEPLT+EDVL ++D E+P G+IVQ+GGQTPLKL+L 
Sbjct: 598  YETIMVNCNPETVSTDYDTSDRLYFEPLTLEDVLEIVDKEKPVGVIVQYGGQTPLKLALD 657

Query: 738  IHQYLDEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEAD 797
                L+ + +P         I GTSPD IDAAEDRERF  ++++L + QP    A++E +
Sbjct: 658  ----LERNGVP---------IIGTSPDMIDAAEDRERFQKLLQDLGLRQPPNRTARAEDE 704

Query: 798  ALAIAKEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAI 857
            AL +A+EIGYP+VVRPSYVLGGRAMEIV+    L  Y+  AV+V  + PVL+D++L+DAI
Sbjct: 705  ALRLAEEIGYPLVVRPSYVLGGRAMEIVHEPRDLERYMREAVKVSNDSPVLLDRFLNDAI 764

Query: 858  EIDVDALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKR 917
            E DVDAL D    V IGG+MEHIEQAGVHSGDSAC +P  ++S+  +  +   T  +AK 
Sbjct: 765  ECDVDALCDG-KRVFIGGVMEHIEQAGVHSGDSACSLPPYSLSAETVAELKRQTAAMAKA 823

Query: 918  LNVCGLMNCQYAITTSG---DVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLN 974
            LNV GLMN Q+AI  +     VY+LE NPRASRTVP+VSKA G  LAK AA  M+G+SL+
Sbjct: 824  LNVVGLMNVQFAIQQNNGVDTVYVLEVNPRASRTVPYVSKATGMQLAKIAARCMAGQSLD 883

Query: 975  DLGFTKEVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAA 1034
            + G   EVIP + SVKEAV PF KF G D +LGPEMRSTGEVMG+  SF  A  K+Q+AA
Sbjct: 884  EQGIADEVIPPYYSVKEAVFPFNKFPGVDPVLGPEMRSTGEVMGVGKSFGEALFKSQLAA 943

Query: 1035 GQKLPLSGTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMH 1094
            G +LP  G V +++ D  KP    +A+   D+G+ IV+T GTA  +E  GI V+ V K+ 
Sbjct: 944  GSRLPEKGAVLITVKDSDKPRAVAVARMLHDMGYPIVATRGTASAIEAAGIPVKVVNKVK 1003

Query: 1095 EGRPHAGDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAI 1154
            +GRPH  DM+ NG++ ++  T         D   +R   LA+++P  TT++GA A  E +
Sbjct: 1004 DGRPHIVDMIKNGELALVFTTVDETRGAIADSRSIRISALAHRIPYYTTIAGARAAVEGL 1063

Query: 1155 RSLKS 1159
            + ++S
Sbjct: 1064 KHMQS 1068


>gi|372269111|ref|ZP_09505159.1| carbamoyl phosphate synthase large subunit [Alteromonas sp. S89]
          Length = 1076

 Score = 1239 bits (3205), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 614/1052 (58%), Positives = 786/1052 (74%), Gaps = 18/1052 (1%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILI+GAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIKSILIIGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPAMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  + V +++EKERPDA+LPTMGGQTALN A+AL E+G L+++G ELIGA  +A
Sbjct: 63   ATYIEPVEWKTVAKIIEKERPDAILPTMGGQTALNCALALDENGVLKEFGCELIGADKNA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I+KAEDR+LF +AMK IG++TP + I +++DE   +  E G FP+IIRP+FT+GG+GGG+
Sbjct: 123  IEKAEDRNLFDKAMKAIGLETPRAKIVHSMDEAKKVPEEFG-FPVIIRPSFTMGGSGGGV 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN  EFE ICK GL  S T+++L+++SLLGWKEYE+EV+RD  DN +I+C+IEN DPMG
Sbjct: 182  AYNWPEFEEICKRGLDLSPTNELLIDESLLGWKEYEMEVVRDKNDNCIIVCAIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ +R+ SIA++REIGVE GGSNVQF ++P  G ++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQLMRNASIAVLREIGVETGGSNVQFGMDPKTGRMVVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITK-KTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT   TPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGYTLDELQNDITGGATPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            F FEKF  ++  LTTQMKSVGE MA+GR FQES QKALR LE G  G+            
Sbjct: 362  FTFEKFGEADARLTTQMKSVGEVMAIGRNFQESMQKALRGLEVGSFGFEPKIDPAEVGSM 421

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
            E+L+  L VP  +R+  +  A + GM ++E++ELS ID WFL Q KEL+D+E+ L +   
Sbjct: 422  ERLRRELSVPGAERIWYVGDAFRVGMTIEEVYELSGIDPWFLVQIKELMDIEEPLKSMPT 481

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
            S +T +    +KR+GFSD+++A     ++K VRE R  +GV P+YKRVDTCAAEF  +T 
Sbjct: 482  SALTAESMRFLKRKGFSDRRLADLLGVSQKTVREFRHKMGVFPAYKRVDTCAAEFATSTA 541

Query: 627  YMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSN 686
            YMYS+YD ECE+AP+ KKK+++LGGGPNRIGQGIEFDYCC H + +++  GYETIM+N N
Sbjct: 542  YMYSTYDEECEAAPSDKKKIMVLGGGPNRIGQGIEFDYCCVHAALAMREDGYETIMVNCN 601

Query: 687  PETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHR 746
            PETVSTDYDTSDRLYFEP+T+EDVL ++  E+P G+IVQFGGQTPL L+    +YL    
Sbjct: 602  PETVSTDYDTSDRLYFEPVTLEDVLEIVRKEKPVGVIVQFGGQTPLNLA----RYLAAEG 657

Query: 747  LPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEIG 806
            +P         I GT+P+ ID AEDRERF  +I  L ++QP+  I +SE +A+  AKE+G
Sbjct: 658  VP---------IIGTTPEQIDRAEDRERFQQMIMRLGLKQPQNAIVRSEYEAIQRAKEVG 708

Query: 807  YPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALAD 866
            YP+VVRPSYVLGGRAMEIVY ++ L TY++ AVEV  + PVL+D +L  AIE+D+DA++D
Sbjct: 709  YPLVVRPSYVLGGRAMEIVYKEDELKTYMKEAVEVSDDAPVLLDHFLHSAIEVDIDAVSD 768

Query: 867  SCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNC 926
               +VVIG IM+HIEQ GVHSGDSAC +P  ++ +   D +      +A+ L V GLMN 
Sbjct: 769  G-KDVVIGAIMQHIEQCGVHSGDSACSLPPYSLPADVQDKMREQVKAMARELGVVGLMNT 827

Query: 927  QYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPKH 986
            Q A    G++Y++E NPRASRTVPFVSK IG  LAK AA   +G SL + GFT E++P +
Sbjct: 828  QLAY-QDGEIYVIEVNPRASRTVPFVSKCIGTSLAKIAARCQAGISLKEQGFTTEIVPDY 886

Query: 987  VSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVFL 1046
             SVKE+V PF KF   D +LGPEM+STGEVMG+  SF  AF K  I AG  LP SG VF+
Sbjct: 887  YSVKESVFPFNKFPKVDPILGPEMKSTGEVMGVGESFAEAFDKGLIGAGDALPESGKVFI 946

Query: 1047 SLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVAN 1106
            S+ D+ KP +  +A+    +GF++V+T GTA  L+   I V+ V KM EGRPH  DM+ N
Sbjct: 947  SVRDVDKPGVVEVARELASLGFELVATRGTAKVLQEADIPVKTVNKMSEGRPHIVDMIKN 1006

Query: 1107 GQIQMMVITSSGDSLDQIDGLKLRRRGLAYKV 1138
             +I ++V T+ G    + D   +RR    ++V
Sbjct: 1007 DEIALVVNTTEGRQAIR-DSADIRRSAENHQV 1037


>gi|121998554|ref|YP_001003341.1| carbamoyl-phosphate synthase large subunit [Halorhodospira halophila
            SL1]
 gi|121589959|gb|ABM62539.1| carbamoyl-phosphate synthase large subunit [Halorhodospira halophila
            SL1]
          Length = 1073

 Score = 1239 bits (3205), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 617/1072 (57%), Positives = 786/1072 (73%), Gaps = 18/1072 (1%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILI+GAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP  AD
Sbjct: 3    KRTDIQSILIIGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPETAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
              YI P+  + V +++E+E+PDA+LPTMGGQTALN A+ L + G LE+YGVE+IGA  +A
Sbjct: 63   AVYIEPVEWQTVSRIIEREQPDAVLPTMGGQTALNCALDLVKHGVLERYGVEMIGASREA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAE+R+ F+ AM  IG++TP + +  ++ E  +    +G FP+IIRP++TLGG+GGGI
Sbjct: 123  IDKAEEREAFRAAMARIGLETPRAELARSMAEAQAAQARMG-FPVIIRPSYTLGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEF  I + GL  S T++VL+E+S+LGWKEYE+EV+RD  DN +I+CSIEN+DPMG
Sbjct: 182  AYNREEFNEIVERGLDLSYTNEVLLEESVLGWKEYEMEVVRDRHDNAIIVCSIENLDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDS T+APAQTLTDKEYQ +RD S+A++REIGVE GGSNVQFA+NP +G +++IEMN
Sbjct: 242  VHTGDSTTIAPAQTLTDKEYQLMRDASLAVLREIGVETGGSNVQFAINPDNGRMVIIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITK-KTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ N+IT   TPASFEP+IDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGYTLDELRNEITGGATPASFEPTIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            F FEKFP +E  LTTQMKSVGE MA+GRTFQESFQKALR LE   SG      +      
Sbjct: 362  FTFEKFPQAECYLTTQMKSVGEVMAIGRTFQESFQKALRGLEQDLSGLDERLDRSRQDVR 421

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
            + +++SLR P P+R+  +  A + G  +DE+H ++ ID WFL Q +ELI VE  +   ++
Sbjct: 422  DTVRHSLRQPTPERVLHLGDAFRVGFTLDEVHGMTAIDPWFLAQIEELIAVEGQVAASAL 481

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
             +        +KRRGFSD ++A     TE +VR++R  LGV P +KRVD+CAAEF   T 
Sbjct: 482  DDCDAGALLRLKRRGFSDARLASLWGVTEAQVRQRRRELGVRPVFKRVDSCAAEFPTATA 541

Query: 627  YMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSN 686
            Y+YS+Y+ ECE+ PT +KK+++LGGGPNRIGQGIEFDYCC H S SL+  GYETIM+N N
Sbjct: 542  YLYSTYEEECEAEPTGRKKIMVLGGGPNRIGQGIEFDYCCVHASLSLREDGYETIMVNCN 601

Query: 687  PETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHR 746
            PETVSTDYDTSDRLYFEPLT+EDVL V++ E+P+G++VQ+GGQTPLKL+          R
Sbjct: 602  PETVSTDYDTSDRLYFEPLTLEDVLEVVETEQPDGVVVQYGGQTPLKLA----------R 651

Query: 747  LPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEIG 806
               A+G  ++   GTSPDSID AEDRERF  +I  + + QP    A++E +AL +A EIG
Sbjct: 652  ELEAAGTPII---GTSPDSIDLAEDRERFQELIGRIDLMQPPNRTARTETEALQLAAEIG 708

Query: 807  YPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALAD 866
            YP+VVRPSYVLGGRAMEIVY +  L  Y+  AV V    PVL+D++L DA+E+DVDA++D
Sbjct: 709  YPLVVRPSYVLGGRAMEIVYEESELRQYMNEAVRVSHNSPVLLDRFLDDAVEVDVDAVSD 768

Query: 867  SCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNC 926
                VVIGGIM+HIEQAGVHSGDSAC IP  T+     D I      LA+ L V GLMN 
Sbjct: 769  G-DQVVIGGIMQHIEQAGVHSGDSACSIPPYTLGQDVQDRIREQVRLLARELGVVGLMNV 827

Query: 927  QYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPKH 986
            Q+AI     ++LLE NPRASRTVP+VSKA G PLAK AA  M+G++L + G   EVIP +
Sbjct: 828  QFAIQGQ-RIFLLEVNPRASRTVPYVSKACGVPLAKVAARCMAGRTLAEQGVVSEVIPNY 886

Query: 987  VSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVFL 1046
             SVKEAV PF KF G D +LGPEM+STGEVMGI   F  A+AKAQ+AAG  LP  G  F+
Sbjct: 887  YSVKEAVFPFLKFPGVDPILGPEMKSTGEVMGIGACFGEAYAKAQLAAGVTLPRGGCAFV 946

Query: 1047 SLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVAN 1106
            S+ ++ K     +A+  +  GF++++T GTA  LE  G+ V R+ K+ EGRPH  D + N
Sbjct: 947  SVREVDKEAAVEVARDLVRRGFRLIATHGTAAALEEAGLEVRRINKVIEGRPHVVDAIKN 1006

Query: 1107 GQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLK 1158
             +I ++V T+ G      D   +RR  L  KV   TT++GA A   A+  +K
Sbjct: 1007 DEIDLIVNTTEGRQA-IADSYSIRREALQRKVCYTTTIAGARATCLALDHMK 1057


>gi|349575279|ref|ZP_08887199.1| carbamoyl-phosphate synthase, large subunit [Neisseria shayeganii
            871]
 gi|348013151|gb|EGY52075.1| carbamoyl-phosphate synthase, large subunit [Neisseria shayeganii
            871]
          Length = 1077

 Score = 1239 bits (3205), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 618/1092 (56%), Positives = 807/1092 (73%), Gaps = 32/1092 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTDL+ ILI+GAGPIVIGQACEFDYSG QACKAL+EEGY+VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDLKSILIIGAGPIVIGQACEFDYSGAQACKALREEGYKVILVNSNPATIMTDPDMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  + VE+++ KERPDA+LPTMGGQTALN A+ LA +G L KY VELIGA  DA
Sbjct: 63   VTYIEPIMWQTVEKIIAKERPDAVLPTMGGQTALNCALDLARNGVLAKYNVELIGATEDA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  FK+AM+ IG+  P S + +T++E ++   ++G FP +IRP+FT+GG+GGGI
Sbjct: 123  IDKAEDRGRFKEAMEKIGLHCPKSFVCHTMNEALAAQEQVG-FPTLIRPSFTMGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYNK+EF AIC+ G  AS T ++L+E+S+LGWKEYE+EV+RD  DN +IICSIEN DPMG
Sbjct: 182  AYNKDEFIAICERGFDASPTHELLIEQSVLGWKEYEMEVVRDKNDNCIIICSIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGV+ GGSNVQFA+NP +GE++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQIMRNASLAVLREIGVDTGGSNVQFAINPENGEMIVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VG++LD++ NDIT  +TPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGFTLDELRNDITGGRTPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            FAFEKFP ++  LTTQMKSVGE MA+GRT QES QKALR LE G  G+          D 
Sbjct: 362  FAFEKFPAADDRLTTQMKSVGEVMAMGRTIQESMQKALRGLETGLCGFNPKTT-----DK 416

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
             +++  L  P P+R+  +  A + G   ++IHE+  ID WFL Q ++L+  EQ +    +
Sbjct: 417  AEIRRELANPGPERILYVADAFRAGFSKEDIHEICAIDPWFLAQIEDLVQEEQKVSDGHL 476

Query: 567  SNMTKDDFYEVKRRGFSDKQIA--------FATKSTEKEVREKRLSLGVIPSYKRVDTCA 618
            +++       +KR+GFSDK++A          +   EKEVRE R  L + P YKRVDTCA
Sbjct: 477  NDLDYATLRRLKRKGFSDKRLAQLLSLGAPAGSPVGEKEVREHRYGLKLHPVYKRVDTCA 536

Query: 619  AEFEANTPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGY 678
            AEF+++T Y+YS+Y+ ECE+ P++ KKV+ILGGGPNRIGQGIEFDYCC H + +L+ +G+
Sbjct: 537  AEFQSDTAYLYSTYEEECEARPSENKKVMILGGGPNRIGQGIEFDYCCVHAALALRESGF 596

Query: 679  ETIMMNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPI 738
            ETIM+N NPETVSTD+DTSDRLYFEPLT+EDVL ++  E P G+IV +GGQTPLKL+   
Sbjct: 597  ETIMVNCNPETVSTDFDTSDRLYFEPLTLEDVLEIVRTENPWGVIVHYGGQTPLKLA--- 653

Query: 739  HQYLDEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADA 798
                      +A  +  V I GTS DSIDAAEDRERF  ++ +L + QP    A++E +A
Sbjct: 654  ----------NALVENGVNIIGTSADSIDAAEDRERFQKVLNDLGLRQPPNRTARNEEEA 703

Query: 799  LAIAKEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIE 858
            L +A+EIGYP+VVRPSYVLGGRAM++V++ E L  Y+  AV+V  + PVL+D +L++AIE
Sbjct: 704  LVLAEEIGYPLVVRPSYVLGGRAMQVVHSAEQLQKYMREAVQVSEDSPVLLDFFLNNAIE 763

Query: 859  IDVDALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRL 918
            +DVD ++D   +VVIGGIM+H+EQAG+HSGDS C +P  ++S    D I   T  +A  L
Sbjct: 764  VDVDCVSDG-KDVVIGGIMQHVEQAGIHSGDSGCSLPPYSLSEEIQDEIRRQTKAMAYAL 822

Query: 919  NVCGLMNCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGF 978
            NV GLMN Q+A+   G V++LE NPRASRTVPFVSKA   PLAK  A  M+G SL + G 
Sbjct: 823  NVVGLMNVQFAV-QDGVVFVLEVNPRASRTVPFVSKATSVPLAKVGARAMAGISLKEQGV 881

Query: 979  TKEVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKL 1038
             KEV+P   +VKEAV PF KF G D +LGPEMRSTGEVMG+  +F  A+ KAQ+ AG+++
Sbjct: 882  EKEVVPDFYAVKEAVFPFIKFPGVDTILGPEMRSTGEVMGVGATFGEAYLKAQLGAGERM 941

Query: 1039 PLSGTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRP 1098
            P +G VF+++ D  KP + + AK F  +G+ + +T GTA +L+ +G+ V+ V K+ EGRP
Sbjct: 942  PATGKVFIAVRDEDKPLIVKTAKNFQALGYGVCATRGTAAYLQEQGVTVQVVNKVPEGRP 1001

Query: 1099 HAGDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLK 1158
            H  D + NG+I ++V T   D     D   +RR  L  +VP  TTV+G  A +E ++S+ 
Sbjct: 1002 HIVDAIKNGEIALVVNTVGSDVQSVADSHSIRRTSLTQRVPQYTTVAGGEAMSEGVKSM- 1060

Query: 1159 SNTVTMTALQDF 1170
             N + + ++Q+ 
Sbjct: 1061 -NALGVYSVQEL 1071


>gi|347760222|ref|YP_004867783.1| carbamoyl-phosphate synthase large subunit [Gluconacetobacter xylinus
            NBRC 3288]
 gi|347579192|dbj|BAK83413.1| carbamoyl-phosphate synthase large subunit [Gluconacetobacter xylinus
            NBRC 3288]
          Length = 1084

 Score = 1238 bits (3204), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 623/1098 (56%), Positives = 796/1098 (72%), Gaps = 34/1098 (3%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD+  ILI+GAGPIVIGQACEFDYSG QACKALKEEGY VIL+NSNPATIMTDPGLAD
Sbjct: 3    KRTDISSILIIGAGPIVIGQACEFDYSGAQACKALKEEGYRVILVNSNPATIMTDPGLAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+TPE VE+++ +E+PDA+LPTMGGQTALN A+AL +SG L+K+ VELIGA  + 
Sbjct: 63   ATYIEPITPEFVERIILREKPDAVLPTMGGQTALNTAMALDKSGFLKKHNVELIGANAEV 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I +AEDR  F++AM  IG+++P S I +TL+E  S    IG  P +IRP+FT+GG+GGGI
Sbjct: 123  IDRAEDRQKFREAMDEIGIESPRSLIAHTLEEARSALATIG-LPAVIRPSFTMGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEF+ I  +GL AS T++VL+E+S+LGWKEYE+EV+RD ADN +IICSIEN+DPMG
Sbjct: 182  AYNREEFDRIVSSGLDASPTTEVLIEESVLGWKEYEMEVVRDTADNCIIICSIENIDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPA TLTDKEYQRLRD S+A +R+IGVE GGSNVQF +NPVDG V+VIEMN
Sbjct: 242  VHTGDSITVAPALTLTDKEYQRLRDMSLACLRKIGVETGGSNVQFGINPVDGRVVVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRF 447
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT  TPASFEP+IDYVV KIPRF
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGYTLDELTNDITGSTPASFEPTIDYVVVKIPRF 361

Query: 448  AFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDWE 507
             FEKFPG+  LL+T MKSVGEAMA+GR+F E+ QK LRS+E G +G         D   +
Sbjct: 362  TFEKFPGTPALLSTSMKSVGEAMAIGRSFPEALQKGLRSMEIGLAGLDPVEAPG-DGGPD 420

Query: 508  QLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSVS 567
              + +L  P P+R+     A++ G+ VD+IH+    + WFL +  +++  E  ++   + 
Sbjct: 421  AFRAALSQPRPERILMAAQALRAGLSVDDIHDACRFEPWFLRELAKIVAAEHAVVRDGLP 480

Query: 568  NMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTPY 627
                D    +K  GFSD Q+A  + + E EV + R S  V+P YKR+DTCA EF + TPY
Sbjct: 481  E-DADSLRTLKAMGFSDIQLARLSGTQEAEVAKLRESRAVLPVYKRIDTCAGEFASPTPY 539

Query: 628  MYSSYDF-----ECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIM 682
            MYSSY+      ECES PT ++K++ILGGGPNRIGQGIEFDYCC H +++L+ AG+ETIM
Sbjct: 540  MYSSYEGGYGVPECESRPTDRRKIVILGGGPNRIGQGIEFDYCCVHAAYALREAGFETIM 599

Query: 683  MNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGI----IVQFGGQTPLKLSLPI 738
            +N NPETVSTDYDTSDRLYFEPLT EDV+ +I  E+  G     IVQ+GGQTPLKLS   
Sbjct: 600  VNCNPETVSTDYDTSDRLYFEPLTAEDVIALIRREQANGTVLGCIVQYGGQTPLKLS--- 656

Query: 739  HQYLDEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADA 798
                  H L +A     + + GT  D+ID AEDRERF A++  L + QP  GIA+S A+A
Sbjct: 657  ------HALEAAG----IPLLGTPADAIDRAEDRERFQAMLHRLGLRQPDNGIARSPAEA 706

Query: 799  LAIAKEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVD----PERPVLIDKYLS 854
             A+A++IGYPVVVRPSYVLGGRAMEIV+   +L  Y+  A+++        PVLID YL+
Sbjct: 707  EAVAEKIGYPVVVRPSYVLGGRAMEIVHDRASLQRYMRVALQLAGAEVANGPVLIDHYLN 766

Query: 855  DAIEIDVDALADSCGN-VVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIK 913
            DAIE DVD +AD  GN V + G+MEHIE+AG+HSGDSAC +P  T+S + +  + + T  
Sbjct: 767  DAIEADVDCIAD--GNEVYVAGVMEHIEEAGIHSGDSACSLPPYTLSPAIVTELKAQTEA 824

Query: 914  LAKRLNVCGLMNCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSL 973
            +A+ L + GLMN QYAI    D+++LE NPRASRTVPFV+KA G P+AK  A VM+G  L
Sbjct: 825  MARELGIVGLMNVQYAIKGH-DIFVLEVNPRASRTVPFVAKATGVPVAKIGARVMAGAKL 883

Query: 974  NDLGFTKEVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIA 1033
             +       +  HV+VKEAV PF +F   D +LGPEMRSTGEVMG+D SF  AFAK+Q+A
Sbjct: 884  AEFRLDDRAVAPHVAVKEAVFPFNRFPDVDTILGPEMRSTGEVMGLDASFERAFAKSQLA 943

Query: 1034 AGQKLPLSGTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKM 1093
            AG KLPLSG VFLS+ D  K  ++ I +   ++GF IV+T GTA  L   G++V+ V K+
Sbjct: 944  AGVKLPLSGRVFLSVRDSDKAAVKSIGRLLAEMGFTIVATRGTAKCLREAGVSVDIVNKV 1003

Query: 1094 HEGRPHAGDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEA 1153
             EGRP+  D + +G IQM++ T+ G      D   +RR  L + +P  TT++GA A   A
Sbjct: 1004 LEGRPNCVDAIRSGDIQMVINTAQGAQAVS-DSFDIRRSALTHGIPHYTTIAGARAATHA 1062

Query: 1154 IRSLKSNTVTMTALQDFF 1171
            I +++   + +  LQ +F
Sbjct: 1063 ISAMREGVLEVAPLQSYF 1080


>gi|315498931|ref|YP_004087735.1| carbamoyl-phosphate synthase, large subunit [Asticcacaulis
            excentricus CB 48]
 gi|315416943|gb|ADU13584.1| carbamoyl-phosphate synthase, large subunit [Asticcacaulis
            excentricus CB 48]
          Length = 1098

 Score = 1238 bits (3204), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 619/1112 (55%), Positives = 793/1112 (71%), Gaps = 46/1112 (4%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILI+GAGPIVIGQACEFDYSG QACKAL++EGY +IL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIKSILIIGAGPIVIGQACEFDYSGVQACKALRQEGYRIILVNSNPATIMTDPDVAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+TPE VE+++ KERPDALLPTMGGQTALN A+AL  +G L KY VE+IGAK + 
Sbjct: 63   ATYIEPITPEFVEKIIAKERPDALLPTMGGQTALNTALALENNGVLAKYNVEMIGAKAEV 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  F+ AM  +G+++  S + ++ +E +     IG  P +IRP+FTL GTGGGI
Sbjct: 123  IDKAEDRQKFRDAMDKLGLESAKSAVAHSWEEAVEALKTIGGLPAVIRPSFTLAGTGGGI 182

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEF  I   GL  S T++VL+E+S++GWKEYE+EV+RD ADN +I+CSIENVDPMG
Sbjct: 183  AYNQEEFRDIVTRGLDLSPTTEVLIEESIVGWKEYEMEVVRDKADNCIIVCSIENVDPMG 242

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPA TLTDKEYQ +R  S+A++REIGVE GGSNVQFA+NP DG ++VIEMN
Sbjct: 243  VHTGDSITVAPALTLTDKEYQIMRSASLAVLREIGVETGGSNVQFALNPADGRMIVIEMN 302

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRF 447
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDITK TPASFEPSIDYVVTKIPRF
Sbjct: 303  PRVSRSSALASKATGFPIAKIAAKLAVGYTLDELTNDITKVTPASFEPSIDYVVTKIPRF 362

Query: 448  AFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGW------GCSNVKE 501
            AFEK+PGSEPLL T MKSVGE MA+GRTF ES QKALR LE G SG+      G +    
Sbjct: 363  AFEKYPGSEPLLGTSMKSVGEVMAIGRTFAESVQKALRGLETGLSGFDEVEIPGVAGATS 422

Query: 502  LDWDWEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFL 561
            +    E +   L  P PDR++ I  A + G+ V+EI+     + WFL Q + ++  E  +
Sbjct: 423  VHAIKEAVVRELGRPTPDRLRVIAQAFRHGLSVEEINTACHYEPWFLRQIETIVAEEAKI 482

Query: 562  LTQSVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEF 621
                +   T  +  ++K  GFSD ++A  T + EK+VR  R  L V P +KR+DTCAAEF
Sbjct: 483  GALGLPK-TAHELRKLKAMGFSDVRLAKLTGTKEKDVRAARRGLNVRPVFKRIDTCAAEF 541

Query: 622  EANTPYMYSSYDF-------ECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQ 674
             ++T YMYS+Y+        ECE+AP+ +KK +ILGGGPNRIGQGIEFDYCCCH +F+ +
Sbjct: 542  ASSTAYMYSTYESGALGQVPECEAAPSDRKKAIILGGGPNRIGQGIEFDYCCCHAAFAYK 601

Query: 675  SAGYETIMMNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPE----GIIVQFGGQT 730
              G E IM+N NPETVSTDYDTSDRLYFEPLT EDVL +I +E+      G++VQFGGQT
Sbjct: 602  DMGLEAIMVNCNPETVSTDYDTSDRLYFEPLTAEDVLELISVEQSNGTLAGVVVQFGGQT 661

Query: 731  PLKLSLPIHQYLDEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGG 790
            PLKL+    Q L++  +P         I GTSPD+ID AEDRERF  ++KE+++ QP   
Sbjct: 662  PLKLA----QALEDEGIP---------ILGTSPDAIDLAEDRERFQQLLKEINLTQPVNA 708

Query: 791  IAKSEADALAIAKEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLID 850
            IA++  +A   A E+GYP+V+RPSYVLGGRAMEI+  DE L  Y+  AV+V  + PVLID
Sbjct: 709  IARTPEEAFKAAHEVGYPIVIRPSYVLGGRAMEIIRDDEQLTRYVREAVQVSGDSPVLID 768

Query: 851  KYLSDAIEIDVDALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSW 910
            +YLS AIE+D DAL+D  G V + GIMEHIE+AGVHSGDSAC +P  ++    +  +   
Sbjct: 769  QYLSAAIEVDADALSDETG-VFVAGIMEHIEEAGVHSGDSACALPPFSLKPETVKELERQ 827

Query: 911  TIKLAKRLNVCGLMNCQYAIT---TSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALV 967
            TI+LAK L V GLMN Q+AI    T   +Y+LE NPRASRTVPFV+K +G PLA  AA V
Sbjct: 828  TIELAKALKVKGLMNVQFAILNPYTDPKIYVLEVNPRASRTVPFVAKTLGKPLAGIAAKV 887

Query: 968  MSGKSLNDLGFTKEVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDM------ 1021
            M+G+SL+  G T     +HV+VKEAV PF +F   D +LGPEMRSTGEVMG+D       
Sbjct: 888  MAGQSLSSFGLTPRDY-RHVAVKEAVFPFARFANVDTVLGPEMRSTGEVMGLDWVRDGEE 946

Query: 1022 ---SFPIAFAKAQIAAGQKLPLSGTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAH 1078
               +F  AFAK+Q+  G +LP SG VF+SL D  KP +    +  L +GF++  T+GTA 
Sbjct: 947  MIDAFARAFAKSQLGGGTRLPTSGKVFVSLKDQDKPVIVEAIRTLLSLGFEVCGTAGTAD 1006

Query: 1079 FLELKGIAVERVLKMHEGRPHAGDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKV 1138
            +L  +G+ ++ + K+ EGRP+  D + NG+I ++  T+ G     +D   +RR  L  K+
Sbjct: 1007 YLSAQGVKIDTIKKVLEGRPNVLDAIKNGEIALVFNTTEGKQA-LLDSFSIRRTTLMMKI 1065

Query: 1139 PVITTVSGALANAEAIRSLKSNTVTMTALQDF 1170
            P  TT +GA+A   AI S     + + ++Q++
Sbjct: 1066 PYYTTANGAVAAVRAIASGLKGELDVRSIQEY 1097


>gi|89095225|ref|ZP_01168148.1| carbamoyl-phosphate synthase, large subunit [Neptuniibacter
            caesariensis]
 gi|89080522|gb|EAR59771.1| carbamoyl-phosphate synthase, large subunit [Oceanospirillum sp.
            MED92]
          Length = 1069

 Score = 1238 bits (3204), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 611/1073 (56%), Positives = 797/1073 (74%), Gaps = 26/1073 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KR+DL+ ILILGAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRSDLQSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPAMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  + VE+++ KE+PDALLPTMGGQTALN A+ L   G LEK+GVE+IGA  D 
Sbjct: 63   STYIEPINWKTVEKIIAKEKPDALLPTMGGQTALNCALDLEREGVLEKHGVEMIGANADT 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDRD F +AMK IG++ P + I ++++E + +  ++G FP IIRP+FT+GGTGGGI
Sbjct: 123  IDKAEDRDRFDKAMKNIGLECPRAAIAHSMEEALQVQAQLG-FPCIIRPSFTMGGTGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYNKEEF  IC+ GL  S T+++L+++SL+GWKEYE+EV+RD  DN +I+C+IEN D MG
Sbjct: 182  AYNKEEFIEICERGLDLSPTTELLIDESLIGWKEYEMEVVRDKNDNCIIVCAIENFDAMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGVE GGSNVQF VNP DG ++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQIMRNASLAVLREIGVETGGSNVQFGVNPKDGRMVVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL++GY+LD++ NDIT   TPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAIGYTLDELQNDITGGATPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            F FEKFP +   LTTQMKSVGE MA+GRT QES QKALR LE G +G+       +D   
Sbjct: 362  FTFEKFPQANDRLTTQMKSVGEVMAIGRTQQESLQKALRGLEVGATGFDPI----IDITS 417

Query: 507  EQLKYS----LRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLL 562
            E  + +    ++ P  +R+  +  A + GM VDE++E+S ID WFL Q +++I  EQ + 
Sbjct: 418  EDARSTIVREMKEPGAERIWYLGDAFRMGMSVDELYEISGIDPWFLVQVEDIIKDEQRVS 477

Query: 563  TQSVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFE 622
              ++S++ KD  + +KR+GFSD+++A     +EK+ R+ R +L V P YKRVDTCAAEF 
Sbjct: 478  EMAMSDLDKDAVFRLKRKGFSDERLATLLGVSEKQFRKHRHNLDVRPVYKRVDTCAAEFS 537

Query: 623  ANTPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIM 682
            ++T YMYSSY+ ECE+ P+ + K++++GGGPNRIGQGIEFDYCC H + + +  G+ETIM
Sbjct: 538  SDTAYMYSSYEEECEANPSDRDKIMVIGGGPNRIGQGIEFDYCCVHAALAARDDGFETIM 597

Query: 683  MNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYL 742
            +N NPETVSTDYDTSDRL+FEP+T+EDVL ++ +E+P+G+IVQ+GGQTPLKL++ + Q  
Sbjct: 598  VNCNPETVSTDYDTSDRLFFEPITLEDVLEIVHVEKPKGVIVQYGGQTPLKLAVALEQ-- 655

Query: 743  DEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIA 802
                         V I GTSP++ID AEDRE+F  ++K L ++QP+    +S  +A+  A
Sbjct: 656  -----------AGVPIIGTSPEAIDRAEDREQFQQMLKRLGLKQPENATVRSLEEAIIEA 704

Query: 803  KEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVD 862
             ++GYP+VVRPSYVLGGRAMEIVY +E L  Y+  AV+V  + PVL+D +L+ A+E+D+D
Sbjct: 705  DKLGYPLVVRPSYVLGGRAMEIVYKEEELRRYMTTAVQVSNDAPVLLDHFLNAAVEVDID 764

Query: 863  ALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCG 922
            A+ D   +VVIG IM+HIEQAGVHSGDSAC  P  ++++   D +     K+A  L V G
Sbjct: 765  AVCDG-KDVVIGAIMQHIEQAGVHSGDSACSFPPYSLAADVQDEMREMVRKMALELGVVG 823

Query: 923  LMNCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEV 982
            LMN Q A    G++Y++E NPRASRTVPFVSK IG  LAK  A VM+GKSL +LGFTKE+
Sbjct: 824  LMNTQLAY-QDGEIYVIEVNPRASRTVPFVSKCIGVSLAKIGAQVMTGKSLAELGFTKEI 882

Query: 983  IPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSG 1042
            +P   +VKEAV PF KFQG D +L PEM+STGEVMG+  +F  AF KA I AG+ LP SG
Sbjct: 883  VPALYNVKEAVFPFNKFQGVDPILSPEMKSTGEVMGVGATFGEAFMKAHIGAGETLPESG 942

Query: 1043 TVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGD 1102
              F+S+ +  K  +  +AK  + +GFK+V+T GTA  L+  GI  E V K+ EGRP+  D
Sbjct: 943  KAFVSVREADKSAVAAMAKDLVALGFKLVATKGTAQLLQESGIEAEVVNKVMEGRPNIID 1002

Query: 1103 MVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIR 1155
            M+ N +I  +V T+ G    + D   +RR  L +KVP  TT++GA A   A++
Sbjct: 1003 MIKNDEIAYIVNTTEGRKAIE-DSADIRRSALQHKVPYTTTLAGAEAITMALQ 1054



 Score =  241 bits (616), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 154/429 (35%), Positives = 239/429 (55%), Gaps = 26/429 (6%)

Query: 61  VRASSAKIDS-SAELSNGAA----SSKDQKLGKRTDLRKILILGAGPIVIGQACEFDYSG 115
           VR    ++D+ +AE S+  A    S +++     +D  KI+++G GP  IGQ  EFDY  
Sbjct: 522 VRPVYKRVDTCAAEFSSDTAYMYSSYEEECEANPSDRDKIMVIGGGPNRIGQGIEFDYCC 581

Query: 116 TQACKALKEEGYEVILINSNPATIMTDPGLADRTYITPMTPELVEQVLEKERPDALLPTM 175
             A  A +++G+E I++N NP T+ TD   +DR +  P+T E V +++  E+P  ++   
Sbjct: 582 VHAALAARDDGFETIMVNCNPETVSTDYDTSDRLFFEPITLEDVLEIVHVEKPKGVIVQY 641

Query: 176 GGQTALNLAVALAESGALEKYGVELIGAKLDAIKKAEDRDLFKQAMKTIGVKTPPSGIGN 235
           GGQT L LAV      ALE+ GV +IG   +AI +AEDR+ F+Q +K +G+K P +    
Sbjct: 642 GGQTPLKLAV------ALEQAGVPIIGTSPEAIDRAEDREQFQQMLKRLGLKQPENATVR 695

Query: 236 TLDECISIANEIGEFPLIIRPAFTLGGTGGGIAYNKEEFEAICKAGLAASLTSQVLVEKS 295
           +L+E I  A+++G +PL++RP++ LGG    I Y +EE        +  S  + VL++  
Sbjct: 696 SLEEAIIEADKLG-YPLVVRPSYVLGGRAMEIVYKEEELRRYMTTAVQVSNDAPVLLDHF 754

Query: 296 LLGWKEYELEVMRDLADNVVIICSIENVDPMGVHTGDSITVAPAQTLTDKEYQRLRDYSI 355
           L    E +++ + D  D VVI   +++++  GVH+GDS    P  +L       +R+   
Sbjct: 755 LNAAVEVDIDAVCDGKD-VVIGAIMQHIEQAGVHSGDSACSFPPYSLAADVQDEMREMVR 813

Query: 356 AIIREIGVECGGSNVQFAVNPVDGEVMVIEMNPRVSRSSALASKATGFPIAKMAAKLSVG 415
            +  E+GV  G  N Q A    DGE+ VIE+NPR SR+    SK  G  +AK+ A++  G
Sbjct: 814 KMALELGV-VGLMNTQLAYQ--DGEIYVIEVNPRASRTVPFVSKCIGVSLAKIGAQVMTG 870

Query: 416 YSLDQIPNDITKK-TPASFEPSIDYVVTKIPRFAFEKFPGSEPLLTTQMKSVGEAMALGR 474
            SL ++    TK+  PA +         K   F F KF G +P+L+ +MKS GE M +G 
Sbjct: 871 KSLAEL--GFTKEIVPALYN-------VKEAVFPFNKFQGVDPILSPEMKSTGEVMGVGA 921

Query: 475 TFQESFQKA 483
           TF E+F KA
Sbjct: 922 TFGEAFMKA 930


>gi|144897959|emb|CAM74823.1| carbamoyl-phosphate synthase, large chain [Magnetospirillum
            gryphiswaldense MSR-1]
          Length = 1083

 Score = 1238 bits (3203), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 637/1100 (57%), Positives = 790/1100 (71%), Gaps = 39/1100 (3%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILI+GAGPIVIGQACEFDYSG QACKALKEEGY VIL+NSNPATIMTDPGLAD
Sbjct: 3    KRTDIKSILIIGAGPIVIGQACEFDYSGVQACKALKEEGYRVILVNSNPATIMTDPGLAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+TPE+V +++ KERPDALLPTMGGQTALN A+ LA+ G LEKYGVE+I AK D 
Sbjct: 63   ATYIEPITPEVVAKIIAKERPDALLPTMGGQTALNTAMKLADDGTLEKYGVEMIAAKRDV 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR LF+ AM  IG+ +P S +  TL E     + +G  P IIRP+FTL GTGGGI
Sbjct: 123  IAKAEDRLLFRDAMDKIGLDSPKSRVVRTLQEARESLDFVG-LPAIIRPSFTLAGTGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN EE+E I   GLAAS   +VLVE+S+LGWKEYE+EV+RD  DN +IICSIENVDPMG
Sbjct: 182  AYNIEEYENIVSGGLAASPVHEVLVEESVLGWKEYEMEVVRDKKDNCIIICSIENVDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPA TLTDKEYQ +R+ S+A++REIGV+ GGSNVQFAVNP +G + VIEMN
Sbjct: 242  VHTGDSITVAPALTLTDKEYQIMRNASLAVLREIGVDTGGSNVQFAVNPKNGRMTVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRF 447
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT  TPASFEP+IDYVVTKIPRF
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGYTLDELANDITGVTPASFEPTIDYVVTKIPRF 361

Query: 448  AFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGW------GCSNVKE 501
             FEKFPG++P LTT MKSVGEAMA+GRTFQES QK LRS+E G +G       G S    
Sbjct: 362  TFEKFPGADPNLTTSMKSVGEAMAIGRTFQESLQKGLRSMETGLTGMNEVEIPGASAADR 421

Query: 502  LDWDWEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFL 561
             D     +K +L  P  DR+  I  A + G+ VDEIH     DKWFL Q K ++D E+ +
Sbjct: 422  KD----AMKKALATPRHDRLLVIAQAFRLGLSVDEIHAACSYDKWFLEQIKGIVDAEEEV 477

Query: 562  LTQSVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEF 621
              + +  +       +K+ GFSD++++  +  T  E   +R  L V P +KR+DTCAAEF
Sbjct: 478  RAKGLP-IDAPGLLRLKKMGFSDQRLSELSGKTLTETTFRREVLNVKPVFKRIDTCAAEF 536

Query: 622  EANTPYMYSSYD------FECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQS 675
             ++T YMYS Y+       ECE+  + + KV+ILGGGPNRIGQGIEFDYCC H +++L  
Sbjct: 537  PSSTAYMYSCYEGDGINPAECEADVSDRDKVIILGGGPNRIGQGIEFDYCCVHAAYALDD 596

Query: 676  AGYETIMMNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPE----GIIVQFGGQTP 731
            AG ETIM+N NPETVSTDYDTSDRLYFEPLT E V+ ++  E+ +    G IVQFGGQTP
Sbjct: 597  AGKETIMVNCNPETVSTDYDTSDRLYFEPLTAETVIELVRKEQSKGRVLGCIVQFGGQTP 656

Query: 732  LKLSLPIHQYLDEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGI 791
            LKL+         H L  A     + I GTSPDSID AEDRERF  ++ +L ++QP  G 
Sbjct: 657  LKLA---------HALEDAG----IPILGTSPDSIDLAEDRERFQGLLHDLGLKQPPNGT 703

Query: 792  AKSEADALAIAKEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDK 851
            A+S  +A A+A  IGYPVV+RPS+VLGGRAM+IVY  E L  Y++ AV V  + PVLID 
Sbjct: 704  ARSLDEAKAVADRIGYPVVIRPSFVLGGRAMQIVYDHEALERYMKEAVVVSGKDPVLIDF 763

Query: 852  YLSDAIEIDVDALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWT 911
            YL +AIE+DVDALAD   +V + GIM+HIE+AG+HSGDSAC +P  ++    +  +   T
Sbjct: 764  YLKNAIEVDVDALADGT-DVFVAGIMQHIEEAGIHSGDSACSLPPYSLDDDTIAELERQT 822

Query: 912  IKLAKRLNVCGLMNCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGK 971
            + LAK LNV GLMN QYA+   G +Y+LE NPRASRTVPFV+KA G P+AK AA +M+G+
Sbjct: 823  VALAKALNVRGLMNVQYAV-QDGVIYILEVNPRASRTVPFVAKATGIPIAKIAARIMAGE 881

Query: 972  SLNDLGFTKEVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQ 1031
            +L      KE +  HV+VKEAV PF +F G D+LLGPEM+STGEVMGID  F +AFAKAQ
Sbjct: 882  TLASFNIKKEKL-DHVAVKEAVFPFARFPGVDILLGPEMKSTGEVMGIDKDFALAFAKAQ 940

Query: 1032 IAAGQKLPLSGTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVL 1091
            + AG  LP  G VF+S+ +  KP +  + +   D+GFK+++T GTA  L   G  V+ V 
Sbjct: 941  LGAGTVLPTEGCVFISVREGDKPAMVAVGQQLQDMGFKLMATEGTARTLREAGCTVQVVN 1000

Query: 1092 KMHEGRPHAGDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANA 1151
            K+ EGRPH  D + NGQIQ++V T+ G    + D   +RR  L   +P  TTV+GA A  
Sbjct: 1001 KVLEGRPHCVDAMTNGQIQLVVNTTEGSQAVK-DSFSIRRSALQSNIPHFTTVAGAQAAV 1059

Query: 1152 EAIRSLKSNTVTMTALQDFF 1171
            +AI +LK   + +  LQ +F
Sbjct: 1060 KAIAALKRGALDVAPLQSYF 1079


>gi|288957103|ref|YP_003447444.1| carbamoyl-phosphate synthase large chain [Azospirillum sp. B510]
 gi|288909411|dbj|BAI70900.1| carbamoyl-phosphate synthase large chain [Azospirillum sp. B510]
          Length = 1081

 Score = 1238 bits (3203), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 626/1094 (57%), Positives = 798/1094 (72%), Gaps = 29/1094 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ I I+GAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDPGLAD
Sbjct: 3    KRTDIKSICIIGAGPIVIGQACEFDYSGVQACKALREEGYRVILVNSNPATIMTDPGLAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+TP +V ++LEKERPDALLPTMGGQTALN A+AL++ G LE+ GVE+IGAK D 
Sbjct: 63   ATYIEPITPAVVAKILEKERPDALLPTMGGQTALNTAMALSDDGTLERLGVEMIGAKRDV 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR LF+ AM  +G+++P S +  TL E +     +G  P IIRP+FTL GTGGGI
Sbjct: 123  IAKAEDRILFRDAMDKLGLESPKSRMVRTLTEAMDALEFVG-LPAIIRPSFTLAGTGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+ EFE I + GL AS   +VL+E+S+LGWKEYE+EV+RD ADN +IIC+IEN+DPMG
Sbjct: 182  AYNRAEFEDIVRGGLRASPVGEVLIEESVLGWKEYEMEVVRDGADNCIIICAIENIDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAP+ TLTDKEYQ +RD SIA++REIGV+ GGSNVQFAVNP +G ++VIEMN
Sbjct: 242  VHTGDSITVAPSLTLTDKEYQIMRDASIAVLREIGVDTGGSNVQFAVNPANGRLIVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRF 447
            PRVSRSSALASKATGFPIAK+AAKL+VGY LD++ NDIT  TPASFEP+IDYVVTK+PRF
Sbjct: 302  PRVSRSSALASKATGFPIAKIAAKLAVGYRLDELTNDITGTTPASFEPTIDYVVTKMPRF 361

Query: 448  AFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDWE 507
             FEKF GSEPLLTT MKSVGEAM++GRTFQES QKALRS+E G +G+    + + + D  
Sbjct: 362  TFEKFKGSEPLLTTSMKSVGEAMSIGRTFQESVQKALRSMETGLTGFNEVKIGDGNPDRT 421

Query: 508  QLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSVS 567
             ++ +L  P PDR+  I  A + G  V+E+  +S  D WFL Q K ++D E  +    + 
Sbjct: 422  AIRGALATPTPDRLLVIAQAFRHGFTVEEVQAVSKYDPWFLEQIKAIVDREAAIRADGLP 481

Query: 568  NMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTPY 627
               K  + ++K+ GFSD ++A   K++E  V   R   GV P YKR+DTCAAEF + TPY
Sbjct: 482  T-DKAGWLKLKQMGFSDARLAELAKTSEAAVATARREAGVTPVYKRIDTCAAEFASATPY 540

Query: 628  MYSSYDF------ECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETI 681
            MYS+Y+       ECE+ PT K+KV+ILGGGPNRIGQGIEFDYCC H  ++LQ AG ETI
Sbjct: 541  MYSTYETDGTGEAECEADPTDKRKVVILGGGPNRIGQGIEFDYCCVHAVYALQEAGIETI 600

Query: 682  MMNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGI----IVQFGGQTPLKLSLP 737
            M+N NPETVSTDYDT+DRLYFEPLT EDV+ ++ +E+  G     IVQFGGQTPLKL+  
Sbjct: 601  MVNCNPETVSTDYDTADRLYFEPLTAEDVVELVRVEQRNGTVLGCIVQFGGQTPLKLA-- 658

Query: 738  IHQYLDEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEAD 797
                       +A     + I GTSPD+ID AEDRERF  ++ EL+++QP  G+A+S  +
Sbjct: 659  -----------AALEAAGIPILGTSPDAIDLAEDRERFQKLLHELALKQPANGLARSLEE 707

Query: 798  ALAIAKEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAI 857
            A A+A  IG+PVV+RPSYVLGGRAMEIV+    L  Y+  AV+V  + PVLID YL DAI
Sbjct: 708  AEAVASRIGFPVVIRPSYVLGGRAMEIVHDMAGLQRYMGTAVQVSGKNPVLIDSYLQDAI 767

Query: 858  EIDVDALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKR 917
            E+DVD + D    V + G+MEHIE+AG+HSGDSAC +P  ++ +  +  I+  +  LA+ 
Sbjct: 768  EVDVDVVCDG-ETVYVAGVMEHIEEAGIHSGDSACALPPYSLPAETIAEINRQSDALARA 826

Query: 918  LNVCGLMNCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLG 977
            L V GLMN Q+A+  +G VY+LE NPRASRTVPFV+KA G  +AK AA VM+G++L+   
Sbjct: 827  LKVVGLMNVQFAV-QAGTVYILEVNPRASRTVPFVAKATGTAIAKIAARVMAGEALSSFT 885

Query: 978  FTKEVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQK 1037
                  P H +VKEAV PF +F G D++LGPEM+STGEVMG+D +F +AFAKAQ+ AG  
Sbjct: 886  LNGPN-PPHTAVKEAVFPFARFPGVDIVLGPEMKSTGEVMGLDHNFALAFAKAQLGAGVT 944

Query: 1038 LPLSGTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGR 1097
            LP+ G VF+S+ D  KP L  I+K   ++GF+I++TSGTA  L+  G+  E V K+ EG+
Sbjct: 945  LPVKGCVFVSVKDHDKPALAIISKKLHEMGFRILATSGTAKVLKDAGVEAEVVNKVVEGK 1004

Query: 1098 PHAGDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSL 1157
            PH  D + NG + +++ T+ G      D   LRR  L Y +P  TTV+GA A  EAI +L
Sbjct: 1005 PHIVDAMINGDVHLVINTTEGAQALS-DSFSLRRTALTYNIPYYTTVAGARAAVEAIAAL 1063

Query: 1158 KSNTVTMTALQDFF 1171
            ++ ++ +  LQ + 
Sbjct: 1064 RNGSLEVAPLQSYL 1077


>gi|302879461|ref|YP_003848025.1| carbamoyl-phosphate synthase large subunit [Gallionella
            capsiferriformans ES-2]
 gi|302582250|gb|ADL56261.1| carbamoyl-phosphate synthase, large subunit [Gallionella
            capsiferriformans ES-2]
          Length = 1075

 Score = 1238 bits (3203), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 618/1067 (57%), Positives = 792/1067 (74%), Gaps = 26/1067 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILI+GAGPIVIGQACEFDYSG QACKAL+EEGY V+L+NSNPATIMTDP +AD
Sbjct: 3    KRTDIKSILIIGAGPIVIGQACEFDYSGAQACKALREEGYRVVLVNSNPATIMTDPDMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+T ++VE+++ KERPDA+LPTMGGQTALN A+ LA  G LEKY VE+IGA  +A
Sbjct: 63   ATYIEPITWQIVEKIIAKERPDAILPTMGGQTALNCALDLAHHGVLEKYNVEMIGASREA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I  AEDR+ FKQAM  IG+ +  S I ++++E + +   +G FP +IRP+FT+GG+GGGI
Sbjct: 123  IDMAEDREKFKQAMTRIGLASARSAIAHSMEEALQVQQVMG-FPTVIRPSFTMGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEF  IC+ GL AS TS++L+E+SLLGWKEYE+EV+RD  DN +IICSIEN+DPMG
Sbjct: 182  AYNREEFLEICERGLEASPTSELLIEESLLGWKEYEMEVVRDRNDNCIIICSIENLDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPA TLTDKEYQ LRD S+A++REIGVE GGSNVQF++NP DG ++VIEMN
Sbjct: 242  VHTGDSITVAPALTLTDKEYQILRDASLAVLREIGVETGGSNVQFSINPDDGRMVVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VG++LD++ NDIT   TPASFEP+IDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKIAAKLAVGFTLDELQNDITGGATPASFEPAIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            FAFEKFP +   LTTQMKSVGE MA+GRTFQESFQKALR LE G +G   S    LD   
Sbjct: 362  FAFEKFPQANDRLTTQMKSVGEVMAIGRTFQESFQKALRGLEVGVNGLD-SKFDNLD--- 417

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
              +   LR P P R+ A+  A + GM V+E+  +S ID+WFL Q  +LI  E  LL + +
Sbjct: 418  -AVTAELRNPGPSRIWAVSDAFRLGMSVEEVFNVSKIDRWFLVQIADLIRQEATLLGRPL 476

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
             ++  D+   +KR GF+D ++A   ++    +R  R +LGV P YKRVDTCAAEF  +T 
Sbjct: 477  ESVNADEMRTLKRSGFADARLADLLETDPSALRAYRHALGVRPVYKRVDTCAAEFSTDTA 536

Query: 627  YMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSN 686
            YMYS+Y+ ECE+ PT  KK+++LGGGPNRIGQGIEFDYCC H + +++  GYETIM+N N
Sbjct: 537  YMYSTYEEECEANPTNNKKIMVLGGGPNRIGQGIEFDYCCVHAALAMREDGYETIMVNCN 596

Query: 687  PETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHR 746
            PETVSTDYDTSDRLYFEPLT+EDVL V+ +E+P G+IVQ+GGQTPL L+    + L+++ 
Sbjct: 597  PETVSTDYDTSDRLYFEPLTLEDVLEVVAVEKPVGVIVQYGGQTPLSLA----RGLEKNG 652

Query: 747  LPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEIG 806
            +P         I GT+PD ID AEDRERF  ++  L ++QP    A + A+ LA A  IG
Sbjct: 653  VP---------IIGTTPDMIDCAEDRERFKQMLMALELKQPPNRTASTVAEGLAGAAAIG 703

Query: 807  YPVVVRPSYVLGGRAMEIVYTDETLVTYLENA---VEVDPER-PVLIDKYLSDAIEIDVD 862
            YP+V+RPS VLGGRAMEI++    L  Y+ +A    +  PER P+L+D++L+DAIE+DVD
Sbjct: 704  YPLVMRPSNVLGGRAMEIIHEQVDLERYMRDAEIMSKTYPERLPILLDRFLNDAIEVDVD 763

Query: 863  ALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCG 922
            A++D   +V+IGGIMEHIE+AGVHSGDSAC +P  ++  +  + +   T+ +A+ LNV G
Sbjct: 764  AVSDGV-DVIIGGIMEHIEEAGVHSGDSACSLPPFSLPVAMQNELRRQTVAMARALNVVG 822

Query: 923  LMNCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEV 982
            LMN Q+AI     VY+LE NPRASRTVPFVSKA G PLAK AA  M+G+SL + G T EV
Sbjct: 823  LMNVQFAIQGE-TVYVLEVNPRASRTVPFVSKATGVPLAKIAARCMAGQSLAEQGVTGEV 881

Query: 983  IPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSG 1042
            +P + SVKEAV PF KF G D +LGPEM+STGEVMG+  +F  AF K+Q+AA  KLP SG
Sbjct: 882  VPPYYSVKEAVFPFIKFPGVDTILGPEMKSTGEVMGVGETFAEAFVKSQLAASVKLPKSG 941

Query: 1043 TVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGD 1102
             VF+S+ +  KP    +A++  ++GF I++T GTA  +   G+ V+ V K+ EGRPH  D
Sbjct: 942  NVFISVREADKPGAVDVARSLAELGFTILATRGTAAAISAAGVPVKSVNKVAEGRPHIVD 1001

Query: 1103 MVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALA 1149
            MV NG++ +++ T         D   +R   L  +V   TT++GA A
Sbjct: 1002 MVKNGEVNLIINTVDSKPAVMRDSYSIRHAALQGRVTYYTTLAGARA 1048


>gi|387130169|ref|YP_006293059.1| carbamoyl-phosphate synthase large subunit [Methylophaga sp. JAM7]
 gi|386271458|gb|AFJ02372.1| Carbamoyl-phosphate synthase large chain [Methylophaga sp. JAM7]
          Length = 1072

 Score = 1238 bits (3202), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 624/1056 (59%), Positives = 796/1056 (75%), Gaps = 22/1056 (2%)

Query: 86   LGKRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGL 145
            + KRTD++ ILILGAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +
Sbjct: 1    MAKRTDIQSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPNM 60

Query: 146  ADRTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKL 205
            AD TYI P+  + V +V+E ERPDA+LPTMGGQTALN A+ L ++G LEK+GVE+IGA  
Sbjct: 61   ADATYIEPVNWQSVSKVIETERPDAILPTMGGQTALNCALDLEKNGVLEKFGVEMIGADS 120

Query: 206  DAIKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGG 265
            +AI KAEDRDLF++AM+ IG+  P S I ++LDE + +  + G FP+IIRP+FT+GG+GG
Sbjct: 121  EAINKAEDRDLFREAMRKIGLDMPQSDIAHSLDEALEVQQKFG-FPVIIRPSFTMGGSGG 179

Query: 266  GIAYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDP 325
            GIAYN+E+F  IC+ GL  S TS++L+E+S++GWKEYE+EV+RD  DN +IICSIEN+DP
Sbjct: 180  GIAYNREDFIDICQRGLYLSPTSELLIEESIIGWKEYEMEVVRDKKDNAIIICSIENLDP 239

Query: 326  MGVHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIE 385
            MGVHTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGVE GGSNVQFAVNP  G +++IE
Sbjct: 240  MGVHTGDSITVAPAQTLTDKEYQIMRNASLAVLREIGVETGGSNVQFAVNPETGRLIIIE 299

Query: 386  MNPRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITK-KTPASFEPSIDYVVTKI 444
            MNPRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ N+IT   TPASFEP+IDYVVTK+
Sbjct: 300  MNPRVSRSSALASKATGFPIAKVAAKLAVGYTLDELQNEITGGATPASFEPTIDYVVTKV 359

Query: 445  PRFAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGW-GCSNVKELD 503
            PRF FEKFP ++  L+TQMKSVGE MA+GR FQES QKALR LE    G+    ++K+ +
Sbjct: 360  PRFTFEKFPLADNRLSTQMKSVGEVMAIGRNFQESLQKALRGLEIDRDGFTDILDLKDPN 419

Query: 504  WDWEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLT 563
               E L+  L +P  DR+  +  A++ GM  DE+ +L+ ID WFL Q +E+I++E  L  
Sbjct: 420  I-AETLRRELSLPGSDRIWYVADALRYGMSFDEVQQLTHIDPWFLIQIQEIIEIENSLKE 478

Query: 564  QSVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEA 623
            +S++ +   +  ++K +GFSD ++A     TEK++R  R  LGV P YKRVDTCAAEF  
Sbjct: 479  RSLNEIEALEMRQLKAKGFSDSRLAKLLHKTEKQLRSYRHQLGVRPVYKRVDTCAAEFAT 538

Query: 624  NTPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMM 683
             T YMYSSYD ECE+ P+ + K++ILGGGPNRIGQGIEFDYCC H + +L+  GYETIM+
Sbjct: 539  TTAYMYSSYDEECEANPSDRDKIMILGGGPNRIGQGIEFDYCCVHAALALRDDGYETIMV 598

Query: 684  NSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLD 743
            N NPETVSTDYDTSDRLYFE LT+EDVL V+ LE+P+G+IVQFGGQTPLKL+        
Sbjct: 599  NCNPETVSTDYDTSDRLYFESLTLEDVLEVVALEKPKGVIVQFGGQTPLKLA-------- 650

Query: 744  EHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAK 803
              R   A+G   V I GTSPD+ID AEDRERF  ++ +L + QP   +A S   A+A+A 
Sbjct: 651  --RALEAAG---VPIIGTSPDAIDHAEDRERFQQMVDKLGLLQPPNRLAHSVDGAVALAA 705

Query: 804  EIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDA 863
            EIGYP+VVRPSYVLGGRAMEIVY +E L  Y+  AV V  + PVL+D++L DAIE+DVDA
Sbjct: 706  EIGYPLVVRPSYVLGGRAMEIVYNEEELQRYMLTAVSVSNDSPVLLDRFLDDAIEVDVDA 765

Query: 864  LADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGL 923
            + D   +V+IGGIMEHIEQAGVHSGDSAC IP  ++S + +D +     ++A  L V GL
Sbjct: 766  ICDG-KDVLIGGIMEHIEQAGVHSGDSACAIPPYSLSPAIMDQLREQVRQMAIELGVIGL 824

Query: 924  MNCQYAITTSGD-VYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEV 982
            MN Q+AI   GD +++LE NPRASRTVP+VSK+IG  LAK AA  M+GKSL + G TKE+
Sbjct: 825  MNTQFAI--QGDRIFILEVNPRASRTVPYVSKSIGVALAKVAARCMAGKSLVEQGVTKEI 882

Query: 983  IPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSG 1042
            IP + SVKEAV PF KFQG D +LGPEM+STGEVMG+  SF  AFAK+Q+AA   LP+ G
Sbjct: 883  IPSYYSVKEAVFPFIKFQGVDPILGPEMKSTGEVMGVGRSFGEAFAKSQLAASVTLPVGG 942

Query: 1043 TVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGD 1102
              F+S+ +  K  +  IA+    +GF +++T GT   L   G+A ERV K+ EG+PH  D
Sbjct: 943  KAFISVREADKQAVIAIARDLHKLGFALLATRGTQQALTEAGVACERVRKVAEGQPHIVD 1002

Query: 1103 MVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKV 1138
            M+ N +I ++V T+ G      D  ++RR  L ++V
Sbjct: 1003 MIKNDEIALIVNTTEGRQ-SVADSREIRRAALQHQV 1037


>gi|421747724|ref|ZP_16185405.1| carbamoyl phosphate synthase large subunit [Cupriavidus necator
            HPC(L)]
 gi|409773627|gb|EKN55388.1| carbamoyl phosphate synthase large subunit [Cupriavidus necator
            HPC(L)]
          Length = 1082

 Score = 1238 bits (3202), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 625/1085 (57%), Positives = 808/1085 (74%), Gaps = 32/1085 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILI+GAGPI+IGQACEFDYSG QACKAL+EEG++VIL+NSNPATIMTDP  AD
Sbjct: 3    KRTDIQSILIIGAGPIIIGQACEFDYSGAQACKALREEGFKVILVNSNPATIMTDPNTAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+T E+VE+++ KERPDA+LPTMGGQTALN A+ L   G L+KY VELIGA  +A
Sbjct: 63   VTYIEPITWEVVERIIAKERPDAILPTMGGQTALNCALDLHRHGVLDKYKVELIGASPEA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGE------FPLIIRPAFTLG 261
            I KAEDR  FK AM  IG+ +  SGI ++++E +++ ++I        +P++IRP+FTLG
Sbjct: 123  IDKAEDRQKFKDAMTKIGLGSAKSGIAHSMEEALAVQSQIARETNTSGYPIVIRPSFTLG 182

Query: 262  GTGGGIAYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIE 321
            GTGGGIAYN+EEFE ICK GL  S T ++L+E+SLLGWKEYE+EV+RD  DN +I+CSIE
Sbjct: 183  GTGGGIAYNREEFEEICKRGLDLSPTRELLIEESLLGWKEYEMEVVRDKKDNCIIVCSIE 242

Query: 322  NVDPMGVHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEV 381
            N+DPMG+HTGDSITVAPAQTLTDKEYQ LR+ S+A++REIGV+ GGSNVQF++NP DG +
Sbjct: 243  NLDPMGIHTGDSITVAPAQTLTDKEYQLLRNASLAVLREIGVDTGGSNVQFSINPKDGRM 302

Query: 382  MVIEMNPRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYV 440
            +VIEMNPRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ N+IT  +TPASFEPSIDYV
Sbjct: 303  IVIEMNPRVSRSSALASKATGFPIAKVAAKLAVGYTLDELKNEITGGQTPASFEPSIDYV 362

Query: 441  VTKIPRFAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVK 500
            VTK+PRFAFEKFP ++  LTTQMKSVGE MA+GRTFQESFQKALR LE G  G     + 
Sbjct: 363  VTKVPRFAFEKFPQADSHLTTQMKSVGEVMAMGRTFQESFQKALRGLEVGVDG-----LD 417

Query: 501  ELDWDWEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQF 560
            E   D +++   +    PDR+  +  A + GM ++E++  + ID WFL Q ++++  E  
Sbjct: 418  EKSTDRDEIVEEIGEAGPDRIWYVGDAFRLGMSLEEVYAETDIDPWFLAQIEDIVKTEAQ 477

Query: 561  LLTQSVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAE 620
            +  +++++++  +   +K++GFSD+++A   K+  K VRE RL+  V P YKRVDTCAAE
Sbjct: 478  VKARTLASLSAAELRYLKQKGFSDRRLARLMKTDAKAVREARLANNVRPVYKRVDTCAAE 537

Query: 621  FEANTPYMYSSYDF---ECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAG 677
            F  NT YMYS+Y+    ECE+ PT K+K+++LGGGPNRIGQGIEFDYCC H + +L+  G
Sbjct: 538  FATNTAYMYSTYEAEHGECEANPTDKRKIMVLGGGPNRIGQGIEFDYCCVHAALALREDG 597

Query: 678  YETIMMNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLP 737
            YETIM+N NPETVSTDYDTSDRLYFEPLT+EDVL ++D E+P G+IVQ+GGQTPLKL+L 
Sbjct: 598  YETIMVNCNPETVSTDYDTSDRLYFEPLTLEDVLEIVDKEKPVGVIVQYGGQTPLKLALD 657

Query: 738  IHQYLDEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEAD 797
            +           A+G   V I GTSPD IDAAEDRERF  +++EL + QP    A++E +
Sbjct: 658  LE----------ANG---VPIIGTSPDMIDAAEDRERFQKLLQELGLRQPPNRTARAEDE 704

Query: 798  ALAIAKEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAI 857
            AL +A+EIGYP+VVRPSYVLGGRAMEIV+    L  Y+  AV+V  + PVL+D++L+DAI
Sbjct: 705  ALKLAEEIGYPLVVRPSYVLGGRAMEIVHEPRDLERYMREAVKVSNDSPVLLDRFLNDAI 764

Query: 858  EIDVDALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKR 917
            E DVDAL D    V IGG+MEHIEQAGVHSGDSAC +P  ++S + +D +   T  +AK 
Sbjct: 765  ECDVDALCDG-KRVFIGGVMEHIEQAGVHSGDSACSLPPYSLSQATVDELKRQTAAMAKA 823

Query: 918  LNVCGLMNCQYAITTSGD---VYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLN 974
            LNV GLMN Q+AI        VY+LE NPRASRTVP+VSKA G  LAK AA  M+G+SL+
Sbjct: 824  LNVVGLMNVQFAIQQKDGQDIVYVLEVNPRASRTVPYVSKATGLSLAKIAARCMAGQSLD 883

Query: 975  DLGFTKEVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAA 1034
            + G   EV+P + SVKEAV PF KF G D +LGPEMRSTGEVMG+  +F  A  K+Q+AA
Sbjct: 884  EQGIGAEVVPPYYSVKEAVFPFNKFPGVDPVLGPEMRSTGEVMGVGKTFGEALFKSQLAA 943

Query: 1035 GQKLPLSGTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMH 1094
            G +LP  GTV L++ D  KPH   +A+   D+G+ +V+T GTA  +E  GI V  V K+ 
Sbjct: 944  GSRLPERGTVLLTVKDSDKPHAVSVARMLHDMGYPLVATRGTASAIEAAGIPVRVVNKVK 1003

Query: 1095 EGRPHAGDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAI 1154
            +GRPH  DM+ NG++ ++  T         D   +R   LA +VP  TT++GA A  E +
Sbjct: 1004 DGRPHIVDMLKNGELALVFTTVDETRTAIADSRSIRISALANRVPYYTTIAGARAAVEGL 1063

Query: 1155 RSLKS 1159
            + +++
Sbjct: 1064 KQMQN 1068


>gi|116328910|ref|YP_798630.1| carbamoyl phosphate synthase large subunit [Leptospira borgpetersenii
            serovar Hardjo-bovis str. L550]
 gi|116121654|gb|ABJ79697.1| Carbamoyl-phosphate synthase (glutamine- hydrolyzing), large subunit
            [Leptospira borgpetersenii serovar Hardjo-bovis str.
            L550]
          Length = 1106

 Score = 1237 bits (3201), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 632/1119 (56%), Positives = 805/1119 (71%), Gaps = 58/1119 (5%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            +R D+R +LILG+GPIVIGQACEFDYSGTQA KALKE+G  VIL+NSNPATIMTDP LAD
Sbjct: 3    RREDIRSVLILGSGPIVIGQACEFDYSGTQAAKALKEKGIRVILLNSNPATIMTDPDLAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TY+ PMT  +V+++LEKE+PDA+LPT+GGQTALNLA+A   +G LEKY VELIGAK+DA
Sbjct: 63   ATYVEPMTVPVVQKILEKEKPDAILPTVGGQTALNLALACNGAGLLEKYNVELIGAKVDA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            IKKAEDR+LFK+AM+ IGV+ P SG+ N L +   I  ++G  PLI+RPAFTLGGTGGGI
Sbjct: 123  IKKAEDRELFKKAMEKIGVRVPASGLANNLTDAAEIKKKLG-LPLIVRPAFTLGGTGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AY +E FE +   GL AS  SQVL+E+S+LGWKE+ELEVMRDLADNVVIICSIEN+DPMG
Sbjct: 182  AYTEETFEEVVSKGLKASPISQVLLEESVLGWKEFELEVMRDLADNVVIICSIENIDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAP QTL+DKEYQ LRD SIAIIREIGVE GGSN+QFAVNP +G+V+VIEMN
Sbjct: 242  VHTGDSITVAPQQTLSDKEYQNLRDMSIAIIREIGVETGGSNIQFAVNPANGDVIVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRF 447
            PRVSRSSALASKATGFPIAK+AA LS+GY+LD+I NDIT+ TPASFEPSIDYVVTK+PRF
Sbjct: 302  PRVSRSSALASKATGFPIAKIAALLSIGYTLDEIKNDITRVTPASFEPSIDYVVTKVPRF 361

Query: 448  AFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSN-VKEL---- 502
            AFEKFPG++  L  QMK+VGEAMA+GRTF+ESFQKALRSLE    G+G     +EL    
Sbjct: 362  AFEKFPGTDDTLGVQMKAVGEAMAIGRTFKESFQKALRSLEIDRYGFGSDGYFQELLYTR 421

Query: 503  ----DWDWEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVE 558
                D   E +   L+ PN  R+  +  A  +G  V++IH+L  +D+WFL Q ++L+ +E
Sbjct: 422  SLNSDQRKEWIDSFLKRPNDKRIFYVKLAFDEGYTVEQIHDLCKMDRWFLWQMEDLLKLE 481

Query: 559  QFLLTQSVSNMTKDDFYEVKRRGFSDKQIAFAT--------------------------K 592
            +    +  S + K     +KR GFS++Q++F                            K
Sbjct: 482  REYSEKGDSVLAK-----MKRAGFSNRQLSFLKNKKRILDLLDGDLRVDLKKTEIQNILK 536

Query: 593  STEKEVREKRLSLGVIPSYKRVDTCAAEFEANTPYMYSSYDFECESAPTQKKKVLILGGG 652
             +E+E+  +  S  ++P YKR+DTCA EFEA TPY YSSYD E ES  T  K V+ILGGG
Sbjct: 537  KSEEEIETELGSEKILPVYKRIDTCAGEFEAYTPYFYSSYDEEDESDVTSTKSVMILGGG 596

Query: 653  PNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSNPETVSTDYDTSDRLYFEPLTVEDVLN 712
            PNRIGQGIEFDYCCC  S++LQ  G E+IM+NSNPETVSTDYDTSDRLYFEPLT+EDV  
Sbjct: 597  PNRIGQGIEFDYCCCQASYALQDLGVESIMVNSNPETVSTDYDTSDRLYFEPLTLEDVYR 656

Query: 713  VIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHRLPSASGDGLVRIWGTSPDSIDAAEDR 772
            +   E+PEG+I+QFGGQTPLKL+  + +           G   V+I GTSPDSID AEDR
Sbjct: 657  IYQNEKPEGVIIQFGGQTPLKLAKDLER----------KG---VKILGTSPDSIDRAEDR 703

Query: 773  ERFNAIIKELSIEQPKGGIAKSEADALAIAKEIGYPVVVRPSYVLGGRAMEIVYTDETLV 832
            +RF  ++++L +  P+ GIA S  +A  IA+ + YP++VRPSYVLGGRAM I+  ++ L 
Sbjct: 704  KRFVEVLEKLKLRSPESGIATSMEEAREIAQNVKYPILVRPSYVLGGRAMLIINEEKELD 763

Query: 833  TYLENAVEVDPERPVLIDKYLSDAIEIDVDALADSCGNVVIGGIMEHIEQAGVHSGDSAC 892
             Y+E A E+  +RP+LID +L DA+E+DVDAL D    V + GIMEHIE+AG+HSGDSAC
Sbjct: 764  RYMEKAEEISKDRPLLIDSFLEDAVEVDVDALCDG-KEVFVTGIMEHIEEAGIHSGDSAC 822

Query: 893  MIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNCQYAITTSGDVYLLEANPRASRTVPFV 952
            ++P +T+S + +D I   T+ LA  L V GL+N QYA+     +Y++E NPRASRTVPFV
Sbjct: 823  ILPPQTLSKNMMDEIRKATVDLALELQVKGLINIQYAVKNE-ILYVIEVNPRASRTVPFV 881

Query: 953  SKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRS 1012
            SKA+GHP+ KYA  V+ G+SL +L   KE+    VSVKE VLPF KF G D +LGPEMRS
Sbjct: 882  SKALGHPIVKYATRVIMGESLKNLPLPKEMAFSQVSVKEVVLPFNKFPGVDTILGPEMRS 941

Query: 1013 TGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVFLSLNDLTKPHLERIAKAFLDIGFKIVS 1072
            TGEVMGI  +   AF K+Q  AG +LP  GTVF+S+ND TK  L    K   ++GF +++
Sbjct: 942  TGEVMGIASTVGEAFLKSQYMAGDELPSQGTVFVSINDKTKLELLSYIKDLSELGFNLIA 1001

Query: 1073 TSGTAHFLELKGIAVERVLKMHEG-RPHAGDMVANGQIQMMVITSSGDSLDQIDGLKLRR 1131
            TSGT  FL   GI   ++ K+++G  P A D +   +I  ++I +    + + D   +R+
Sbjct: 1002 TSGTHKFLSDNGILSSKINKVYDGIFPTALDYIRENKIH-LIINTPLSRVTRDDSFTIRQ 1060

Query: 1132 RGLAYKVPVITTVSGALANAEAIRSLKSNTVTMTALQDF 1170
              + +KVP +TT + A A  + +  +K+   T+ +LQ+ 
Sbjct: 1061 AAIRFKVPCLTTSNAAKALIKGMVEMKNKGFTVHSLQEI 1099


>gi|410943512|ref|ZP_11375253.1| carbamoyl phosphate synthase large subunit [Gluconobacter frateurii
            NBRC 101659]
          Length = 1084

 Score = 1237 bits (3200), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 623/1104 (56%), Positives = 807/1104 (73%), Gaps = 40/1104 (3%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILI+GAGPIVIGQACEFDYSG QACKAL+EEGY VILINSNPATIMTDPGLAD
Sbjct: 3    KRTDIKSILIIGAGPIVIGQACEFDYSGAQACKALREEGYRVILINSNPATIMTDPGLAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+TPE VE+++ KE+PDA+LPTMGGQTALN A+AL +SG L+K+ VELIGA  + 
Sbjct: 63   ATYIEPITPEFVERIILKEKPDAVLPTMGGQTALNAAMALDKSGFLKKHNVELIGADAEV 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I +AEDR  F++AM  IG+++P S I +TL+E  +   ++G  P IIRP+FT+GG GGGI
Sbjct: 123  IDRAEDRQKFREAMDEIGIESPRSTIAHTLEEARAALADVG-LPAIIRPSFTMGGAGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEF+ I   GL AS T++VL+E+S+LGWKEYE+EV+RD ADN +IICSIEN+DPMG
Sbjct: 182  AYNREEFDQIVAGGLDASPTTEVLIEESVLGWKEYEMEVVRDTADNCIIICSIENIDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPA TLTDKEYQR+RD S+A +R+IGVE GGSNVQF VNP DG ++VIEMN
Sbjct: 242  VHTGDSITVAPALTLTDKEYQRMRDASLACLRKIGVETGGSNVQFGVNPADGRMVVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRF 447
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDITK TPASFEP+IDYVV KIPRF
Sbjct: 302  PRVSRSSALASKATGFPIAKIAAKLAVGYTLDELKNDITKTTPASFEPTIDYVVAKIPRF 361

Query: 448  AFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDWE 507
             FEKFPGS  LL+T MKSVGEAM++GR+F E+ QK  RS+E G +G    +  E   D  
Sbjct: 362  TFEKFPGSPALLSTSMKSVGEAMSVGRSFAEAIQKGFRSMETGLTGL---DPVEAPGDGS 418

Query: 508  QLKY--SLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQS 565
            +  Y  +L  P P+R+     A++ G+ V+E+ +    + WFL Q +++I  E+ +    
Sbjct: 419  KDAYLAALAEPRPERILMAAQALRAGLTVEEVQQACKFEPWFLRQLEDIIASERNV---E 475

Query: 566  VSNMTKD--DFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEA 623
             + + KD   F  +K +GFSD+Q+A  +   E +V  +R +L V+P Y+R+DTCAAEF +
Sbjct: 476  KNGLPKDAYGFRRLKAQGFSDRQLARLSGQNEADVLAQREALSVVPVYRRIDTCAAEFAS 535

Query: 624  NTPYMYSSYDF-----ECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGY 678
            +TPY+YS+Y+      ECES PT + K++ILGGGPNRIGQGIEFDYCC H +++L+ AG+
Sbjct: 536  DTPYLYSTYEGGFGTPECESQPTGRDKIIILGGGPNRIGQGIEFDYCCVHAAYALREAGF 595

Query: 679  ETIMMNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLE----RPEGIIVQFGGQTPLKL 734
            ET+M+N NPETVSTDYDTSDRLYFEPLT EDV+ +I  E    +  G IVQ+GGQTPLKL
Sbjct: 596  ETVMVNCNPETVSTDYDTSDRLYFEPLTAEDVIALIRTEARGGKVLGCIVQYGGQTPLKL 655

Query: 735  SLPIHQYLDEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKS 794
            S    + L+E  +P         + GT  D+ID AEDRERF  ++++L + QP+ GIA++
Sbjct: 656  S----RALEEAGIP---------LLGTPADAIDRAEDRERFQTMLRKLGLRQPRNGIART 702

Query: 795  EADALAIAKEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVE-VDPE---RPVLID 850
             ADA  +A+E+GYPVV RPSYVLGGRAMEIVY +  L  YL   +    PE    P+L+D
Sbjct: 703  PADAEKVAEEVGYPVVARPSYVLGGRAMEIVYDNAGLKHYLNTVLRAAGPEVSTGPILLD 762

Query: 851  KYLSDAIEIDVDALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSW 910
             YL+DAIE DVD +AD    V + G+MEHIE+AG+HSGDSAC +P  T+S + +  + + 
Sbjct: 763  HYLNDAIEADVDCIADG-ETVYVAGVMEHIEEAGIHSGDSACSLPPYTLSPALVTELRAQ 821

Query: 911  TIKLAKRLNVCGLMNCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSG 970
            T  +A+ L + GLMN QYAI    +V++LE NPRASRTVPFV+KA G P+AK  A VM+G
Sbjct: 822  TEAMARELGIRGLMNVQYAIKDQ-EVFVLEVNPRASRTVPFVAKATGVPVAKIGARVMAG 880

Query: 971  KSLNDLGFTKEVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKA 1030
              L++       +  HV+VKEAV PF +F   D +LGPEMRSTGEVMG+D SF  AFAK+
Sbjct: 881  ARLSEFRLDGGAVSPHVAVKEAVFPFHRFANADTILGPEMRSTGEVMGLDSSFERAFAKS 940

Query: 1031 QIAAGQKLPLSGTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERV 1090
            Q+AAG KLPLSGTVFLS+ D  K H++ +A+  +++GF I++TSGTA  LE   I V+RV
Sbjct: 941  QLAAGVKLPLSGTVFLSVRDSDKGHVQPLARKLVEMGFTILATSGTASRLEEANIPVKRV 1000

Query: 1091 LKMHEGRPHAGDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALAN 1150
             K+ +GRP+  D + +G +QM++ TS G    + D   +RR  L   +P  TT++GA A 
Sbjct: 1001 NKVMQGRPNCVDAIRSGDVQMVINTSQGGQAAR-DSYDIRRGALTMGIPHYTTIAGARAA 1059

Query: 1151 AEAIRSLKSNTVTMTALQDFFDVE 1174
              AI  LK   + +  LQ +F  E
Sbjct: 1060 TYAIAVLKDGDLGVAPLQSYFKGE 1083


>gi|344199193|ref|YP_004783519.1| carbamoyl-phosphate synthase large subunit [Acidithiobacillus
            ferrivorans SS3]
 gi|343774637|gb|AEM47193.1| carbamoyl-phosphate synthase, large subunit [Acidithiobacillus
            ferrivorans SS3]
          Length = 1077

 Score = 1237 bits (3200), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 618/1090 (56%), Positives = 801/1090 (73%), Gaps = 16/1090 (1%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            K  D++ +L++GAGPI+IGQACEFDYSG QACKAL+EEG  VIL+NSNPATIMTD   AD
Sbjct: 3    KYQDIKSVLLIGAGPIIIGQACEFDYSGVQACKALREEGCRVILVNSNPATIMTDAQTAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  + V +++  ERPDA+LPTMGGQTALN A+ L   G LE+YGV LIGA ++A
Sbjct: 63   ATYIEPVEWQTVARIIAMERPDAILPTMGGQTALNCALDLHREGILEQYGVRLIGASVEA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I+ AEDR LFK+AM+ IG++   S  G+ ++    IA +IG FP+IIRP+FTLGGTGGGI
Sbjct: 123  IRAAEDRGLFKKAMEEIGLEVACSAFGHDMEGARQIAEDIG-FPVIIRPSFTLGGTGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEFE I   GL  S T ++L+E+S++GWKE+E+EV+RD ADN +I+CSIEN+DPMG
Sbjct: 182  AYNREEFEEIAARGLETSPTHEILIEESIIGWKEFEMEVVRDRADNCIIVCSIENLDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            +HTGDSITVAPAQTLTD+EYQR+RD SIA++R IGV+ GGSNVQFAVNP DG ++VIEMN
Sbjct: 242  IHTGDSITVAPAQTLTDREYQRMRDASIAVLRRIGVDTGGSNVQFAVNPEDGRLIVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRF 447
            PRVSRSSALASKATGFPIAK+AAKL++GY+LD++ NDIT+ TPASFEP+IDYVVTKIPRF
Sbjct: 302  PRVSRSSALASKATGFPIAKIAAKLALGYTLDELRNDITQATPASFEPTIDYVVTKIPRF 361

Query: 448  AFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDWE 507
            AFEKFP ++  LTTQMKSVGE MA+GR+FQES QKALR LE G  G     V       +
Sbjct: 362  AFEKFPEADAHLTTQMKSVGEVMAIGRSFQESLQKALRGLETGVDGLDEKLVGNDPDTLQ 421

Query: 508  QLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSVS 567
            +L+  LRVP  DR+  +  A+++G   + +  ++ ID WFL Q  E++  E+ L    ++
Sbjct: 422  KLEQELRVPGADRLWYLADAIRRGWDQESLQRITHIDPWFLEQIFEIVQTEENLRGLPLA 481

Query: 568  NMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTPY 627
            ++       +K  GFSD+++A      E+ +RE R  LG+ P YKRVDTCAAEF + TPY
Sbjct: 482  SLDNTRLRTLKGMGFSDRRLARLLGCREQLLREHRQKLGIRPVYKRVDTCAAEFRSPTPY 541

Query: 628  MYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSNP 687
            +YS+Y+ ECE+ P+ K K++ILGGGPNRIGQGIEFDYCC H + +L   G+ETIM+N NP
Sbjct: 542  LYSTYEVECEAEPSDKPKIMILGGGPNRIGQGIEFDYCCVHAAMALHEDGFETIMVNCNP 601

Query: 688  ETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHRL 747
            ETVSTDYDTSDRLYFEPLT+EDVL ++ +E+P+G+IVQFGGQTPLKL+  +         
Sbjct: 602  ETVSTDYDTSDRLYFEPLTLEDVLEIVAVEKPQGVIVQFGGQTPLKLANDLE-------- 653

Query: 748  PSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEIGY 807
              A+G   V I GT+PDSID AEDRERF  +++ L++ QP+  IA+S  +AL+ A+ +GY
Sbjct: 654  --AAG---VPIVGTTPDSIDLAEDRERFQQLLQRLNLRQPENAIARSAPEALSKARALGY 708

Query: 808  PVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALADS 867
            P+VVRPSYVLGGRAM IVY ++ L  Y+  AV +  ++P+L+D++L++A+E+DVDA+ADS
Sbjct: 709  PLVVRPSYVLGGRAMRIVYGEDDLERYMVEAVRISNDQPILLDRFLNNALEVDVDAVADS 768

Query: 868  CGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNCQ 927
               V++ GIMEHIEQAGVHSGDSAC +P  ++S +  D I   T++LA  L V GLMNCQ
Sbjct: 769  EQQVIVAGIMEHIEQAGVHSGDSACCLPPYSLSPAIQDEIRRQTVELALALGVVGLMNCQ 828

Query: 928  YAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPKHV 987
            +A+     +Y+LE NPRASRTVPFVSKA G PLAK A+  M+GKSL   G  +   P H 
Sbjct: 829  FAVQEE-RIYVLEVNPRASRTVPFVSKATGWPLAKIASRCMTGKSLAAQGIPQIPNPPHF 887

Query: 988  SVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVFLS 1047
            SVKEAV PF KF G DVLLGPEM+STGEVMGI  SF  AF KAQI AG+  P SGTVFLS
Sbjct: 888  SVKEAVFPFIKFPGVDVLLGPEMKSTGEVMGIGASFGEAFLKAQIGAGEHFPRSGTVFLS 947

Query: 1048 LNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVANG 1107
            + D  K  L   A+   ++GFK+++T GTA FL  +G+ V  V K+ EGRPH  D + NG
Sbjct: 948  VRDADKKGLIPAARTLSELGFKLIATKGTAAFLHGEGLEVTAVNKVTEGRPHIVDAIKNG 1007

Query: 1108 QIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTVTMTAL 1167
            ++Q ++I +  +     D   +RR  L   +   TT++GA+A A AI +L +   ++  L
Sbjct: 1008 KVQ-IIINTVDERQSVRDSFSIRRAALQMGLTYYTTLAGAIAGAAAIHALMTEERSVLRL 1066

Query: 1168 QDFFDVETAS 1177
            QD     T++
Sbjct: 1067 QDLNQTNTST 1076


>gi|389874346|ref|YP_006373702.1| Carbamoylphosphate synthase large subunit [Tistrella mobilis
            KA081020-065]
 gi|388531526|gb|AFK56720.1| Carbamoylphosphate synthase large subunit [Tistrella mobilis
            KA081020-065]
          Length = 1081

 Score = 1237 bits (3200), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 622/1100 (56%), Positives = 800/1100 (72%), Gaps = 40/1100 (3%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ IL++GAGPIVIGQACEFDYSGTQACKAL+EEGY +IL+NSNPATIMTDPGLAD
Sbjct: 3    KRTDIKSILVIGAGPIVIGQACEFDYSGTQACKALREEGYRIILVNSNPATIMTDPGLAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TY+ P+TPELV +V+E ERPDALLPTMGGQTALN A+AL+  G L+K+GVELIGA   A
Sbjct: 63   ATYVEPITPELVAKVIEAERPDALLPTMGGQTALNTALALSRDGTLKKFGVELIGANEAA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I+KAEDR LF++AM  IG+ +P S +   ++        +G  P IIRP++TLGGTGGGI
Sbjct: 123  IEKAEDRQLFREAMDRIGLSSPRSRVVRDMESAREAMEFVG-LPTIIRPSYTLGGTGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN++EFE I  +GL AS  ++VLVE+S+LGWKEYE+EV+RD ADN +I+CSIEN+DPMG
Sbjct: 182  AYNRQEFEEIVASGLDASPVNEVLVEESVLGWKEYEMEVVRDRADNCIIVCSIENIDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPA TLTDKEYQ +RD S+A++REIGV+ GGSNVQFA++P  G ++VIEMN
Sbjct: 242  VHTGDSITVAPALTLTDKEYQIMRDASLAVLREIGVDTGGSNVQFAIDPETGRMVVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRF 447
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT  TPASFEP+IDYVVTKIPRF
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGYTLDEVQNDITGVTPASFEPTIDYVVTKIPRF 361

Query: 448  AFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGW------GCSNVKE 501
            AFEKFPG+   L+T MK+VGE MA+GR F+ES QKALRS+E G +G       G +   E
Sbjct: 362  AFEKFPGTARTLSTSMKAVGEVMAMGRCFEESLQKALRSMETGLTGLDEIEVAGGAGTSE 421

Query: 502  LDWDWEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFL 561
            +D     L+ +L +P PDR+  I  A++ G+  +EIHE S  D WF+ +   L+  E+ +
Sbjct: 422  VD----ALRSALALPTPDRLLVIAQALRAGLTPEEIHEASDYDPWFIERLAGLVATEKQV 477

Query: 562  LTQSVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEF 621
            +   +       +  +K  GFSD ++A      E+ VR +R   GV P +KRVDTCAAEF
Sbjct: 478  IEDGLP-ADAAGWRRLKSLGFSDARLATLAGLDEEIVRARRWKAGVHPVFKRVDTCAAEF 536

Query: 622  EANTPYMYSSYDF-------ECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQ 674
            EA TPYMYS+Y+        ECE+ P+ + K+++LGGGPNRIGQGIEFDYCC H +++L 
Sbjct: 537  EARTPYMYSTYELPGFDGIVECEAQPSDRTKIIVLGGGPNRIGQGIEFDYCCVHAAYALS 596

Query: 675  SAGYETIMMNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERP----EGIIVQFGGQT 730
             AGYETIM+N NPETVSTDYDTSDRLYFEPLTVEDVL ++ +E      +G+IVQ+GGQT
Sbjct: 597  EAGYETIMVNCNPETVSTDYDTSDRLYFEPLTVEDVLELVRVETSRGTLKGVIVQYGGQT 656

Query: 731  PLKLSLPIHQYLDEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGG 790
            PLKL+ P    L++ ++P         I GTSPD+ID AEDR RF  ++ +L ++QP   
Sbjct: 657  PLKLAEP----LEKAQVP---------ILGTSPDAIDLAEDRRRFQKLLNDLDLKQPAND 703

Query: 791  IAKSEADALAIAKEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLID 850
               SE +ALAIA+ IG+P+V RPSYVLGGRAMEIV+    L +Y+  AV     +PVL+D
Sbjct: 704  TCHSEEEALAIAQRIGFPLVARPSYVLGGRAMEIVHDLGGLSSYMRRAVREFGNKPVLLD 763

Query: 851  KYLSDAIEIDVDALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSW 910
            ++L+DAIE+DVDAL D    VV+ GIMEHIE+AGVHSGDSAC +P  ++    +  I   
Sbjct: 764  RFLTDAIEVDVDALCDG-ETVVVAGIMEHIEEAGVHSGDSACTLPPYSLDDEIIAEIRRQ 822

Query: 911  TIKLAKRLNVCGLMNCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSG 970
            T  LA +L V GLMN Q+A+    ++Y+LE NPRASRTVPFV+KA+G P+AK AA +M+G
Sbjct: 823  TEALALKLGVVGLMNVQFAVKDR-EIYILEVNPRASRTVPFVAKAVGRPIAKIAARIMAG 881

Query: 971  KSLNDLGFTKEVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKA 1030
            + L      +  +  H++VKEAV PF +F G D+LLGPEM+STGEVMG+D  F  +FAKA
Sbjct: 882  EKLGAFDLAERKV-DHIAVKEAVFPFARFPGVDILLGPEMKSTGEVMGLDTDFGRSFAKA 940

Query: 1031 QIAAGQKLPLSGTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERV 1090
            Q+AAG +LP SG VF+S+ D  K  +  IA+     GF+IV+T GTA  L   GI VE V
Sbjct: 941  QLAAGVRLPTSGRVFVSVRDDDKDAMVEIARGLKAQGFEIVATRGTARVLADAGIQVELV 1000

Query: 1091 LKMHEGRPHAGDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALAN 1150
             K HEGRP+  D + + +I M+  T++G S    D   LRR  L  KVP  TTV+G  A 
Sbjct: 1001 KKAHEGRPNIIDQIKDRRIDMVFNTTAG-SQAISDSYSLRRETLMNKVPYFTTVAGCRAT 1059

Query: 1151 AEAIRSLKSNTVTMTALQDF 1170
             +AI ++++ T+ + +LQ +
Sbjct: 1060 VQAIAAIRAGTLEVRSLQSY 1079


>gi|421610700|ref|ZP_16051866.1| carbamoyl-phosphate synthase, large subunit [Rhodopirellula baltica
            SH28]
 gi|408498484|gb|EKK02977.1| carbamoyl-phosphate synthase, large subunit [Rhodopirellula baltica
            SH28]
          Length = 1083

 Score = 1237 bits (3200), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 630/1092 (57%), Positives = 799/1092 (73%), Gaps = 29/1092 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            +R D++KIL++G+GPIVIGQACEFDYSGTQACKAL+EEGYEV+L+NSNPATIMTDP  AD
Sbjct: 3    RRDDIKKILLIGSGPIVIGQACEFDYSGTQACKALREEGYEVVLVNSNPATIMTDPATAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+T ++VE+V+ KERPDALLPT+GGQT LN+A+ L  +G LEKYGVE+I A    
Sbjct: 63   ATYIEPLTWQIVEKVIAKERPDALLPTLGGQTGLNVAMDLDANGVLEKYGVEMIAANAKV 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAE+RD FK+AM+ IG+        +TL E      E+G  P ++RP+FT+GG+G  I
Sbjct: 123  IAKAEERDQFKKAMEKIGLDVCKGFTVHTLAEAREALAEVG-LPAVVRPSFTMGGSGSAI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYNK++F+++ + GL  S  ++VL+E+S++GWKEYE+EVMRD  DNVVIIC+IEN DPMG
Sbjct: 182  AYNKDDFDSLVQNGLDQSPVTEVLIEESIIGWKEYEMEVMRDCDDNVVIICAIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTL+DKEYQR+RD S+A+IREIGVE GGSN+QFA+ P  G ++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLSDKEYQRMRDASLAVIREIGVETGGSNIQFAIEPDTGRMIVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRF 447
            PRVSRSSALASKATGFPIAK+AAKL+VGY L ++PNDIT+KT A FEP+IDYVVTK+PRF
Sbjct: 302  PRVSRSSALASKATGFPIAKIAAKLAVGYRLWELPNDITQKTKACFEPTIDYVVTKMPRF 361

Query: 448  AFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDWE 507
            AFEKFP ++  LTTQMKSVGE M++GRTFQESFQKALR LE G  G+G S+ K+L W  E
Sbjct: 362  AFEKFPEADATLTTQMKSVGETMSIGRTFQESFQKALRGLEVGAFGFG-SDPKDL-WGTE 419

Query: 508  ------QLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFL 561
                  +++  L  P  +R+  I  A K GM   EIH L+ ID WFL   ++LI+ E  L
Sbjct: 420  DQPNRDEIRAKLSTPGSERVFYIRYAFKDGMTAAEIHSLTNIDPWFLDHLQQLIETEDNL 479

Query: 562  LT-QSVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAE 620
                 +  +  D   + KRRGFSD+QIA  T  TE +VR KRL +G+ P YK VDTCAAE
Sbjct: 480  RAIGKLDAIDADTMRDAKRRGFSDRQIATITSKTESQVRAKRLEMGIRPVYKSVDTCAAE 539

Query: 621  FEANTPYMYSSYDFECE-SAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYE 679
            FEA TPY YS+Y+ E E  A   KK+V+ILGGGPNRIGQGIEFDYCCCH SF+LQ  G E
Sbjct: 540  FEAFTPYYYSTYESETEVPAKGDKKRVVILGGGPNRIGQGIEFDYCCCHASFALQEMGIE 599

Query: 680  TIMMNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIH 739
            +IM+NSNPETVSTDYDTSD L+FEPLT+EDVLN+ D  +P+G+IVQFGGQTPL L+  + 
Sbjct: 600  SIMVNSNPETVSTDYDTSDILFFEPLTIEDVLNICDAMQPDGVIVQFGGQTPLNLARGLE 659

Query: 740  QYLDEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADAL 799
            Q               V I GTS D+ID AEDRE F+++I EL + QP  GIA++  +A 
Sbjct: 660  Q-------------AGVPIIGTSVDTIDTAEDRELFSSLIDELGLRQPPSGIARNMDEAR 706

Query: 800  AIAKEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEI 859
              AK IGYP +VRPS+VLGGRAMEI Y       Y+  A  V   +PVLID++L DA E+
Sbjct: 707  VEAKRIGYPALVRPSFVLGGRAMEICYDHSQFARYVAEAFIVADGQPVLIDRFLEDATEV 766

Query: 860  DVDALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLN 919
            DVDA++D   + VI GIMEHIE+AGVHSGDSAC IP  +++   L  I   T KLA RLN
Sbjct: 767  DVDAISDG-NDCVIMGIMEHIEEAGVHSGDSACCIPPFSLTQPVLAEIRDATRKLAARLN 825

Query: 920  VCGLMNCQYAITTSG---DVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDL 976
            V GLMN Q+A+   G    +Y+LE NPRASRTVPFV+KA G P+A  A  VM+G++L +L
Sbjct: 826  VVGLMNIQFAVKMEGTQPTLYILEVNPRASRTVPFVAKATGVPVANLATKVMAGQTLKEL 885

Query: 977  GFTKEVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQ 1036
              T+E IP+HVS+KE+VLPF KF G D++LGPEMRSTGEVMG+   F IAFAK+Q+AAG 
Sbjct: 886  NVTEEPIPRHVSIKESVLPFRKFAGVDIVLGPEMRSTGEVMGVSELFSIAFAKSQLAAGT 945

Query: 1037 KLPLSGTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEG 1096
             LP SG +FLSL+   K   E + K+ +++GF++++T GTA  LE  GIAV RV K+ EG
Sbjct: 946  VLPESGKIFLSLSANHKEAAESLGKSLIELGFELLATEGTAVRLEANGIAVTRVKKLSEG 1005

Query: 1097 RPHAGDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRS 1156
             P+  D + N  +Q+++ T SG      +G K+R  G+ + VP ITT++ A A   A+ +
Sbjct: 1006 HPNLIDYLKNDDVQLILNTPSGKGARTDEG-KIRAAGVQHGVPCITTLAAAEAAVRAMVA 1064

Query: 1157 LKSNTVTMTALQ 1168
            ++   + + +LQ
Sbjct: 1065 MRDTPMEVESLQ 1076


>gi|126664879|ref|ZP_01735863.1| carbamoyl-phosphate synthase large subunit [Marinobacter sp. ELB17]
 gi|126631205|gb|EBA01819.1| carbamoyl-phosphate synthase large subunit [Marinobacter sp. ELB17]
          Length = 1072

 Score = 1237 bits (3200), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 619/1086 (56%), Positives = 792/1086 (72%), Gaps = 23/1086 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILILGAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPAMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+    V +++EKE+PDALLPTMGGQTALN A+ L + G L KYGVE+IGA  D 
Sbjct: 63   ATYIEPIIWSTVAKIIEKEKPDALLPTMGGQTALNCALDLEKHGVLAKYGVEMIGANADT 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  F +AMK+IG++ P + I + L+E   IA+ +G FP IIRP+FT+GG+GGGI
Sbjct: 123  IDKAEDRSRFDKAMKSIGLECPRADIAHNLEEAHRIADNVG-FPCIIRPSFTMGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+ EFE IC  GL  S TS++L+++SL+GWKEYE+EV+RD  DN +I+C+IEN D MG
Sbjct: 182  AYNRGEFEEICIRGLDLSPTSELLIDESLIGWKEYEMEVVRDKNDNCIIVCAIENFDAMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGVE GGSNVQF ++P  G ++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQIMRNASLAVLREIGVETGGSNVQFGIHPDTGRMVVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKK-TPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL++GY+LD++ NDIT   TPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAIGYTLDELKNDITGGITPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWD- 505
            F FEKFP ++  LTTQMKSVGE MA+GRTFQES QKALR LE G  G+    + E D + 
Sbjct: 362  FTFEKFPQADARLTTQMKSVGEVMAIGRTFQESLQKALRGLEVGSDGFD-EMLSEFDSEE 420

Query: 506  -WEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQ 564
              + L   L VP  +R+  I  A + G  V +I   + +D W+L Q ++L+  E+ L   
Sbjct: 421  SRQTLTRELNVPGAERIWYIGDAFRAGQSVADIFRQTHVDPWYLVQIEDLVKEEKALQAS 480

Query: 565  SVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEAN 624
              + +     + +KR+GFSD ++A      E   R +R  LG+ P YKRVDTCAAEF ++
Sbjct: 481  GKAELDHATLFRLKRKGFSDARLAKLMGVKEDAFRARRHGLGIRPVYKRVDTCAAEFASD 540

Query: 625  TPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMN 684
            T YMYSSY+ ECES PT ++K++++GGGPNRIGQGIEFDYCC H + +++  GYETIM+N
Sbjct: 541  TAYMYSSYEEECESNPTDREKIVVIGGGPNRIGQGIEFDYCCVHAALAMREDGYETIMIN 600

Query: 685  SNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDE 744
             NPETVSTDYDTSDRLYFEP+T+EDVL +I +E+P+G+IVQ+GGQTPLKL+         
Sbjct: 601  CNPETVSTDYDTSDRLYFEPITLEDVLEIIHVEKPKGVIVQYGGQTPLKLA--------- 651

Query: 745  HRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKE 804
             R   A+G   V I GTSPD+ID AEDRERF  +I  L ++QP+    +S  + +  A++
Sbjct: 652  -RGLEAAG---VPIIGTSPDAIDCAEDRERFQKLIAGLGLKQPENATVRSHEEGVIAARK 707

Query: 805  IGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDAL 864
            IGYP+VVRPSYVLGGRAMEIVY ++ L  Y+ +AV V  + PVL+D +L+ AIE+D+DA+
Sbjct: 708  IGYPLVVRPSYVLGGRAMEIVYGEDELERYMRSAVLVSNDSPVLLDHFLNAAIEVDIDAI 767

Query: 865  ADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLM 924
             D   +VVIGGIM+HIEQAG+HSGDSAC +P  ++ +   + +     ++A  L V GLM
Sbjct: 768  CDG-KDVVIGGIMQHIEQAGIHSGDSACSLPPYSLPADVQNAMRDAVKQMALALKVVGLM 826

Query: 925  NCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIP 984
            N Q A    GD+Y++E NPRASRTVPFVSKAIG  LAK AA VM+G SL D GFT+E+IP
Sbjct: 827  NVQLA-WQDGDIYVIEVNPRASRTVPFVSKAIGVSLAKVAARVMAGTSLADQGFTQEIIP 885

Query: 985  KHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTV 1044
             H SVKE+V PF KF   D +LGPEM+STGEVMGI  SF  AF KA +AAG++LP +G  
Sbjct: 886  AHYSVKESVFPFNKFPAVDPILGPEMKSTGEVMGIGDSFDEAFGKAVLAAGERLPSTGVA 945

Query: 1045 FLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMV 1104
            F+SL D+ K   E +A++ +D GFKI++T+GTA  L   G+ V  V K+HEGRPH  D +
Sbjct: 946  FMSLRDVDKHGAEHVARSLVDCGFKIIATTGTAAALRKAGVEVALVNKVHEGRPHIVDAI 1005

Query: 1105 ANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTVTM 1164
             NG +Q+++ T+ G      D  ++R+  L  K+   TT++G  A   AI+     TV  
Sbjct: 1006 KNGNVQLVINTTEGRKAVS-DSSQIRQSALQAKISYTTTLAGGEAFCRAIKFGPERTVRR 1064

Query: 1165 TALQDF 1170
              LQD 
Sbjct: 1065 --LQDL 1068


>gi|118594564|ref|ZP_01551911.1| Carbamoyl-phosphate synthase, large subunit, glutamine-dependent
            [Methylophilales bacterium HTCC2181]
 gi|118440342|gb|EAV46969.1| Carbamoyl-phosphate synthase, large subunit, glutamine-dependent
            [Methylophilales bacterium HTCC2181]
          Length = 1067

 Score = 1237 bits (3200), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 628/1065 (58%), Positives = 782/1065 (73%), Gaps = 23/1065 (2%)

Query: 86   LGKRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGL 145
            + KR D++ ILI+GAGPIVIGQACEFDYSG QACKAL EEGY VIL+NSNPATIMTDP L
Sbjct: 1    MTKRKDIKSILIIGAGPIVIGQACEFDYSGAQACKALTEEGYRVILVNSNPATIMTDPDL 60

Query: 146  ADRTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKL 205
            AD TYI P+  ++V +++EKERPDALLPTMGGQTALN A+ L + G L+K+ VELIGA  
Sbjct: 61   ADATYIEPIQWQIVAKIIEKERPDALLPTMGGQTALNCALDLDKHGILKKFNVELIGASK 120

Query: 206  DAIKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGG 265
            +AI KAEDR  FK+AM  IG+ +  S I ++++E I +   IG +P IIRP+FT+GG+GG
Sbjct: 121  EAIDKAEDRQKFKEAMTGIGLASARSAIAHSMEEAIQVQASIG-YPAIIRPSFTMGGSGG 179

Query: 266  GIAYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDP 325
            GIAYNKEEF  IC+ GL AS T+++L+E+SLLGWKEYE+EV+RD  DN +IICSIEN+DP
Sbjct: 180  GIAYNKEEFMLICERGLDASPTNELLIEESLLGWKEYEMEVVRDSNDNCIIICSIENLDP 239

Query: 326  MGVHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIE 385
            MGVHTGDSITVAPAQTLTDKEYQ +R  SI I+REIGV+ GGSNVQFA+NP DG + VIE
Sbjct: 240  MGVHTGDSITVAPAQTLTDKEYQIMRTASINILREIGVDTGGSNVQFAINPDDGRMCVIE 299

Query: 386  MNPRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKK-TPASFEPSIDYVVTKI 444
            MNPRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT   TPASFEP+IDYVVTKI
Sbjct: 300  MNPRVSRSSALASKATGFPIAKIAAKLAVGYTLDELKNDITGGLTPASFEPTIDYVVTKI 359

Query: 445  PRFAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDW 504
            PRFAFEKFP ++  LTTQMKSVGE MA+GRTFQESFQKALR LE G  G     + E   
Sbjct: 360  PRFAFEKFPQADSRLTTQMKSVGEVMAMGRTFQESFQKALRGLEIGVDG-----LVEFSE 414

Query: 505  DWEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQ 564
            D +++   LR   P+R+  +  A +  + V+E+ + S ID WFL Q K+++D E  +  +
Sbjct: 415  DKDEIVKELRECGPNRIWFVGDAFRAQLTVEEVFQHSKIDPWFLYQIKDIVDQESLVKEK 474

Query: 565  SVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEAN 624
            +   +  +    +K+ GFSD +IA      E  VR+ R    + P YKRVDTCAAEFE  
Sbjct: 475  TFEGLEANFLRSLKKSGFSDSRIAKLVGRDESSVRKLRHDQNIRPVYKRVDTCAAEFETK 534

Query: 625  TPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMN 684
            T Y+YS+Y+  CES PT  KK+LILGGGPNRIGQGIEFDYCC H + +L+ +G+ETIM+N
Sbjct: 535  TAYLYSTYEEYCESEPTTNKKILILGGGPNRIGQGIEFDYCCVHAALALRDSGFETIMIN 594

Query: 685  SNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDE 744
             NPETVSTDYDTSDRLYF+P+T+EDVL ++  E P G+IVQ+GGQTPLKL+  +      
Sbjct: 595  CNPETVSTDYDTSDRLYFDPVTLEDVLEIVAKESPWGVIVQYGGQTPLKLAKALE----- 649

Query: 745  HRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKE 804
                   G+G V I GT PD IDAAEDRERF  I+ EL ++QP    A++  +AL +A+E
Sbjct: 650  -------GEG-VPIIGTLPDDIDAAEDRERFQNILNELKLKQPPNKTARTPEEALVLAEE 701

Query: 805  IGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDAL 864
            IGYP+VVRPSYVLGGRAMEIV+    L  Y+  AV+V  E PVL+D++L+DA+EIDVDA+
Sbjct: 702  IGYPLVVRPSYVLGGRAMEIVHEKNDLERYMREAVKVSHESPVLLDRFLNDALEIDVDAI 761

Query: 865  ADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLM 924
            +D   ++VIGGIMEHIEQAGVHSGDSAC +P  T++      I   T K+AK LNV GLM
Sbjct: 762  SDG-EDIVIGGIMEHIEQAGVHSGDSACSLPPHTLTKIVQKMIIEQTKKMAKALNVVGLM 820

Query: 925  NCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIP 984
            N Q+AI    ++Y+LE NPRASRTVPFVSKAIG PLAK AA  M+G SL +  FTKE+ P
Sbjct: 821  NVQFAIQGE-NIYVLEVNPRASRTVPFVSKAIGKPLAKIAANCMAGISLKNQNFTKEITP 879

Query: 985  KHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTV 1044
               SVKEAV PF KF G D +LGPEM+STGEVMG+  +F  AF K+Q+ A   LP  G  
Sbjct: 880  DFFSVKEAVFPFIKFPGVDTILGPEMKSTGEVMGVAKTFAEAFIKSQMGASVILPKGGKA 939

Query: 1045 FLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMV 1104
            FLS+      ++  IA++  D+GFKIV+T GTA+ +  +GI V+ V K+ EGRPH  DM+
Sbjct: 940  FLSVRKEDHLNVIDIAQSLRDLGFKIVATKGTANAIRKQGIDVDTVNKVAEGRPHIVDMI 999

Query: 1105 ANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALA 1149
             N +I  +V  +  D     D  ++RR  L  KV   TT+SGA A
Sbjct: 1000 KNNEIDFIVNITE-DRRAIADSYEIRRNALQNKVTYYTTLSGARA 1043


>gi|417779151|ref|ZP_12426943.1| carbamoyl-phosphate synthase, large subunit [Leptospira weilii str.
            2006001853]
 gi|410780486|gb|EKR65073.1| carbamoyl-phosphate synthase, large subunit [Leptospira weilii str.
            2006001853]
          Length = 1106

 Score = 1237 bits (3200), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 635/1119 (56%), Positives = 803/1119 (71%), Gaps = 58/1119 (5%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            +R D+R +LILG+GPIVIGQACEFDYSGTQA KALKE+G  VIL+NSNPATIMTDP LAD
Sbjct: 3    RREDIRSVLILGSGPIVIGQACEFDYSGTQAAKALKEKGIRVILLNSNPATIMTDPDLAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TY+ PMT  +V+++LEKE+PDA+LPT+GGQTALNLA+A   +G LEKY VELIGAK+DA
Sbjct: 63   ATYVEPMTVSVVQKILEKEKPDAILPTVGGQTALNLALACNSAGLLEKYNVELIGAKVDA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            IKKAEDR+LFK+AM+ IGV+ P SG+ N L +   I  ++G  PLI+RPAFTLGGTGGGI
Sbjct: 123  IKKAEDRELFKKAMEKIGVRVPASGLANNLTDAAEIKKKLG-LPLIVRPAFTLGGTGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AY +E FE +   GL AS  SQVL+E+S+LGWKE+ELEVMRDLADNVVIICSIEN+DPMG
Sbjct: 182  AYTEETFEEVVSKGLKASPISQVLLEESVLGWKEFELEVMRDLADNVVIICSIENIDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAP QTL+DKEYQ LRD SIAIIREIGVE GGSN+QFAVNP +G+V+VIEMN
Sbjct: 242  VHTGDSITVAPQQTLSDKEYQNLRDMSIAIIREIGVETGGSNIQFAVNPANGDVIVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRF 447
            PRVSRSSALASKATGFPIAK+AA LS+GY+LD+I NDIT+ TPASFEPSIDYVVTK+PRF
Sbjct: 302  PRVSRSSALASKATGFPIAKIAALLSIGYTLDEIKNDITRVTPASFEPSIDYVVTKVPRF 361

Query: 448  AFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSN-VKEL---- 502
            AFEKFPG++  L  QMK+VGEAMA+GRTF+ESFQKALRSLE    G+G     +EL    
Sbjct: 362  AFEKFPGTDDTLGVQMKAVGEAMAIGRTFKESFQKALRSLEIDRYGFGSDGYFQELLYAR 421

Query: 503  ----DWDWEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVE 558
                D   E +   L+ PN  R+  I  A  +   VD+IH+L  +D+WFL Q ++L+ +E
Sbjct: 422  SLNSDQRKEWIDSFLKRPNDKRIFYIKLAFDEEYTVDQIHDLCKVDRWFLWQMEDLLKLE 481

Query: 559  QFLLTQSVSNMTKDDFYEVKRRGFSDKQIAFAT--------------------------K 592
            +    +    ++K     +K+ GFS++Q++F                            K
Sbjct: 482  KEYSEKGNLVLSK-----MKQAGFSNRQLSFLKNKKRILDLLDGELRVDLKKTEIQNLLK 536

Query: 593  STEKEVREKRLSLGVIPSYKRVDTCAAEFEANTPYMYSSYDFECESAPTQKKKVLILGGG 652
             +E+E+  K  S  ++P YKR+DTCA EFEA TPY YSSYD E ES  T  K V+ILGGG
Sbjct: 537  KSEEEIETKLGSEKILPVYKRIDTCAGEFEAYTPYFYSSYDEEDESDVTSTKSVMILGGG 596

Query: 653  PNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSNPETVSTDYDTSDRLYFEPLTVEDVLN 712
            PNRIGQGIEFDYCCC  S++LQ  G E+IM+NSNPETVSTDYDTSDRLYFEPLT+EDV  
Sbjct: 597  PNRIGQGIEFDYCCCQASYALQDLGIESIMVNSNPETVSTDYDTSDRLYFEPLTLEDVYR 656

Query: 713  VIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHRLPSASGDGLVRIWGTSPDSIDAAEDR 772
            +   E+PEG+I+QFGGQTPLKL+  + +           G   V+I GTSPDSID AEDR
Sbjct: 657  IYQNEKPEGVIIQFGGQTPLKLAKDLER----------KG---VKILGTSPDSIDRAEDR 703

Query: 773  ERFNAIIKELSIEQPKGGIAKSEADALAIAKEIGYPVVVRPSYVLGGRAMEIVYTDETLV 832
            +RF  ++++L +  P+ GIA S  +A  IA++I YPV+VRPSYVLGGRAM I+  ++ L 
Sbjct: 704  KRFVEVLEKLKLNSPESGIATSMEEAREIAQKITYPVLVRPSYVLGGRAMLIINEEKELD 763

Query: 833  TYLENAVEVDPERPVLIDKYLSDAIEIDVDALADSCGNVVIGGIMEHIEQAGVHSGDSAC 892
             Y+E A E+  +RP+LID +L DA+E+DVDAL D    V + GIMEHIE+AGVHSGDSAC
Sbjct: 764  RYMEKAEEISKDRPLLIDSFLEDAVEVDVDALCDG-KEVFVTGIMEHIEEAGVHSGDSAC 822

Query: 893  MIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNCQYAITTSGDVYLLEANPRASRTVPFV 952
            ++P +T+S + +D I   T+ LA  L V GL+N QYA+     +Y++E NPRASRTVPFV
Sbjct: 823  ILPPQTLSKNMMDEIRRATVDLALELQVKGLINIQYAVKNEV-LYIIEVNPRASRTVPFV 881

Query: 953  SKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRS 1012
            SKA+GHP+ KYA  +M G+SL  L   KE+    VSVKE VLPF KF G D +LGPEMRS
Sbjct: 882  SKALGHPIVKYATRIMMGESLKSLPLPKEMAFSQVSVKEVVLPFNKFPGVDTILGPEMRS 941

Query: 1013 TGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVFLSLNDLTKPHLERIAKAFLDIGFKIVS 1072
            TGEVMGI  +   AF K+Q  AG +LP  GTVF+S+ND TK  L    K   ++GF +++
Sbjct: 942  TGEVMGIASTVGEAFLKSQYMAGDELPSQGTVFVSINDKTKSELLSYIKDLSELGFNLIA 1001

Query: 1073 TSGTAHFLELKGIAVERVLKMH-EGRPHAGDMVANGQIQMMVITSSGDSLDQIDGLKLRR 1131
            TSGT  FL   GI   ++ K++ E  P A D +   +I  ++I +    + + D   +R+
Sbjct: 1002 TSGTHKFLSDNGILSSKINKVYDEIFPTALDYIRENKIH-LIINTPLSRVTRDDSFTIRQ 1060

Query: 1132 RGLAYKVPVITTVSGALANAEAIRSLKSNTVTMTALQDF 1170
              + +KVP +TT + A A  + +  +K+   T+ +LQ+ 
Sbjct: 1061 AAIRFKVPCLTTSNAAKALIKGMVEMKNKGFTIHSLQEI 1099


>gi|336323474|ref|YP_004603441.1| carbamoyl-phosphate synthase large subunit [Flexistipes sinusarabici
            DSM 4947]
 gi|336107055|gb|AEI14873.1| carbamoyl-phosphate synthase, large subunit [Flexistipes sinusarabici
            DSM 4947]
          Length = 1078

 Score = 1237 bits (3200), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 626/1087 (57%), Positives = 782/1087 (71%), Gaps = 22/1087 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILI+G+GPIVIGQACEFDYSGTQA KALKEEGY+VIL+NSNPATIMTDP LAD
Sbjct: 3    KRTDIKSILIIGSGPIVIGQACEFDYSGTQALKALKEEGYKVILVNSNPATIMTDPELAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  E +E ++ KE+PDALLPT+GGQTALN+A+ L + G LEKY VELIGA ++A
Sbjct: 63   STYIEPLNSESLESIISKEKPDALLPTVGGQTALNVALDLDKKGILEKYSVELIGANIEA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR+LFK AM  IG+  P S    +    +   +EIG FP+IIRP+FTLGGTGG +
Sbjct: 123  INKAEDRELFKDAMTKIGLGMPKSAYIRSYQAAMDTIDEIG-FPVIIRPSFTLGGTGGNV 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN EE+       L AS   +VLVE+S++GWKE+ELEVMRDL +NVVIICSIEN D MG
Sbjct: 182  AYNMEEYRDYITWALEASPVHEVLVEESIIGWKEFELEVMRDLNNNVVIICSIENFDAMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ LR+ +I +IREIGV+ GGSNVQFAV+P  G  ++IEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQELRNAAINVIREIGVDTGGSNVQFAVDPKTGRQVIIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRF 447
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD+IPNDITK+TPASFEP+IDY V K PRF
Sbjct: 302  PRVSRSSALASKATGFPIAKIAAKLAVGYTLDEIPNDITKETPASFEPTIDYCVVKFPRF 361

Query: 448  AFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWG---CSNVKELDW 504
             FEKFPGS   LTTQMKSVGE MA+GRTF+ES QK++ SLE G +G+      N+ E + 
Sbjct: 362  TFEKFPGSNDTLTTQMKSVGEVMAIGRTFKESLQKSINSLEIGKTGFDEIFEENMLEDEN 421

Query: 505  DWEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQ 564
              +++   L+ P   R+  I  A + G  VD+I+  S ID WFL   KE+ID E  L  +
Sbjct: 422  VLDEIVNYLKRPTDKRIWYIAEAFRAGFTVDQIYHFSHIDPWFLNNTKEIIDFEYIL--K 479

Query: 565  SVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEAN 624
            + SN   +   + K  GFS+ ++A     +E EV E  +   V   YKRVDTC AEFE+ 
Sbjct: 480  NNSNPDYNVLKKAKELGFSNARLAHLLGKSEPEVEELLVRHCVETVYKRVDTCGAEFESY 539

Query: 625  TPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMN 684
            TPY+YS+++ ECE+  T KKKV+ILGGGPNRIGQGIEFDYCC H  F+L   GYETIM+N
Sbjct: 540  TPYLYSTFEEECEADVTDKKKVVILGGGPNRIGQGIEFDYCCVHACFALSDIGYETIMIN 599

Query: 685  SNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDE 744
             NPETVSTDYDTSDRLYFEPLT E VLN+I  E P+G+IVQFGGQTPLKL+  +      
Sbjct: 600  CNPETVSTDYDTSDRLYFEPLTREHVLNIIKKENPDGVIVQFGGQTPLKLAGSLE----- 654

Query: 745  HRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKE 804
                    +  V+I GTSPDSID AEDRERF  ++  L ++QP   IA     A  IA+ 
Sbjct: 655  --------NSEVKILGTSPDSIDIAEDRERFKDMVNRLDLKQPPNDIAMDYEGAFRIAER 706

Query: 805  IGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDAL 864
            IGYPVVVRPSYVLGGRAMEIVY +++L  Y++ AVE   E PVLIDK+L +A+EIDVDAL
Sbjct: 707  IGYPVVVRPSYVLGGRAMEIVYDEDSLENYMKYAVEASEEHPVLIDKFLENAVEIDVDAL 766

Query: 865  ADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLM 924
            +D   N ++ GIM+HIE+AG+HSGDSAC IP ++IS      I   T ++A+ L V GLM
Sbjct: 767  SDG-ENTIVAGIMQHIEEAGIHSGDSACSIPPRSISKEMESEIIKQTKRIAEELKVIGLM 825

Query: 925  NCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIP 984
            N QYAI   GD+YL+E NPRASRT+P+VSK++G PLAK AA VM G  L D+G       
Sbjct: 826  NIQYAI-KDGDIYLIEVNPRASRTIPYVSKSVGIPLAKVAAKVMLGYKLKDIGIEDVKKN 884

Query: 985  KHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTV 1044
            K  +VKE+V PF KF   D +LGPEM+STGEVMGID +F  AF K+Q+AAG  LP  G V
Sbjct: 885  KFYTVKESVFPFIKFPNTDPILGPEMKSTGEVMGIDTTFGKAFYKSQLAAGNVLPKKGKV 944

Query: 1045 FLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMV 1104
            F+S+ D  K ++  +A+   +IGF+IV+TSGT  +L    I  E VLK+ EGRP+  D++
Sbjct: 945  FISVKDSVKDNIVTVAEKLSNIGFEIVATSGTHKYLVGNNIKAEHVLKVQEGRPNIVDLI 1004

Query: 1105 ANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTVTM 1164
             NGQI  ++   +G    ++D   +RR  L+Y +P +TT+  A A+   I + K   +T 
Sbjct: 1005 KNGQIDFVINVPAGKK-SRLDAHSIRRAILSYNIPYVTTIEAAEASVNGIEAYKDQGLTA 1063

Query: 1165 TALQDFF 1171
             +LQ+++
Sbjct: 1064 KSLQEYY 1070


>gi|326796870|ref|YP_004314690.1| carbamoyl-phosphate synthase large subunit [Marinomonas mediterranea
            MMB-1]
 gi|326547634|gb|ADZ92854.1| carbamoyl-phosphate synthase, large subunit [Marinomonas mediterranea
            MMB-1]
          Length = 1071

 Score = 1236 bits (3199), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 625/1088 (57%), Positives = 795/1088 (73%), Gaps = 28/1088 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ +LILGAGPIVIGQACEFDYSG QACKAL+EEG+ VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIKSVLILGAGPIVIGQACEFDYSGAQACKALREEGFRVILVNSNPATIMTDPSMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  + VE+++EKERPDA+LPTMGGQTALN A+ L   G LEK+ VE+IGA  DA
Sbjct: 63   ATYIEPIEWKTVEKIIEKERPDAVLPTMGGQTALNCALDLERHGVLEKFDVEMIGATADA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  F +AMK IG++ P +GI + ++E + + +E+  FP IIRP+FT+GGTGGGI
Sbjct: 123  IDKAEDRHRFDEAMKAIGLECPRAGIAHNMEEALKVQSEVN-FPCIIRPSFTMGGTGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN EEFE IC  GL  S T+++L+++SL+GWKEYE+EV+RD  DN +I+C+IEN D MG
Sbjct: 182  AYNMEEFEEICTRGLDLSPTNELLIDESLIGWKEYEMEVVRDKNDNCIIVCAIENFDAMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGVE GGSNVQF ++P  G ++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQIMRNASLAVLREIGVETGGSNVQFGMDPKTGRLVVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKK-TPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL++GY+LD++ NDIT   TPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKIAAKLAIGYTLDELQNDITGGLTPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDW-- 504
            F FEKFP +   LTTQMKSVGE MA+GRTFQES QKALR LE G  G+      +LD+  
Sbjct: 362  FTFEKFPTANDRLTTQMKSVGEVMAIGRTFQESVQKALRGLETGSDGFN----PQLDFTK 417

Query: 505  --DWEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLL 562
                E+L   L+ P  DR+  I  A ++ M V+++++++ +D WFL Q ++LI  E  L 
Sbjct: 418  EDSKEKLLGELKSPGADRIWYIGDAFRQNMSVEDVYQVTGVDPWFLVQIEDLIKEEANLS 477

Query: 563  TQSVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFE 622
             + ++++  D    +KR+GFSD ++A     TEK +RE+R  + V P YKRVDTCAAEF 
Sbjct: 478  DKGLADLDYDYVRRLKRKGFSDARLADLLSVTEKSLRERRNLVNVHPVYKRVDTCAAEFA 537

Query: 623  ANTPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIM 682
             NT YMYS+Y+ ECE+APT K KV+ILGGGPNRIGQGIEFDYCC H +  L+  G+ETIM
Sbjct: 538  TNTAYMYSTYEDECEAAPTDKDKVIILGGGPNRIGQGIEFDYCCVHAALGLREDGFETIM 597

Query: 683  MNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYL 742
            +N NPETVSTDYDTSDRLYFEP+T+EDVL ++  E+P+G+IVQFGGQTPLK    I + L
Sbjct: 598  VNCNPETVSTDYDTSDRLYFEPVTLEDVLEIVRTEKPKGVIVQFGGQTPLK----IARAL 653

Query: 743  DEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIA 802
                +P         I GT+P++ID AEDRERF ++I+ L  +QP     +S   A+  A
Sbjct: 654  QNEGVP---------IIGTTPEAIDRAEDRERFQSMIQRLGYKQPNNATVRSTEQAIVKA 704

Query: 803  KEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVD 862
             EIGYP+VVRPSYVLGGRAMEIVY +  L  Y+  AV+V  + PVL+D +L  AIE+D+D
Sbjct: 705  AEIGYPLVVRPSYVLGGRAMEIVYNEAELSRYMTTAVKVSNDSPVLLDHFLKAAIEVDID 764

Query: 863  ALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCG 922
             ++D    VVIGGIM+HIEQAGVHSGDSAC +P  ++ +   D I S    +A  L V G
Sbjct: 765  CVSDG-KQVVIGGIMQHIEQAGVHSGDSACSLPPYSLPADIQDEIRSMIKSMALELGVIG 823

Query: 923  LMNCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEV 982
            LMN Q A+   G+++++E NPRASRTVPFVSK IG  LA+ AALVM+GK+L ++G+T+EV
Sbjct: 824  LMNTQLAV-QDGEIFVIEVNPRASRTVPFVSKCIGRSLAQIAALVMAGKTLEEIGYTEEV 882

Query: 983  IPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSG 1042
            IP + SVKEAV PF KFQG D +LGPEM+STGEVMG+  +F  AF KA +  G  LP SG
Sbjct: 883  IPSYYSVKEAVFPFNKFQGVDPILGPEMKSTGEVMGVGDTFAEAFGKAVLGGGTLLPTSG 942

Query: 1043 TVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGD 1102
              F+S+ D  K     +AK  ++ GF+IV+T GTA +L    + V +V K+ EGRPH  D
Sbjct: 943  RAFISVRDQDKAGAVDVAKRLIENGFEIVATGGTAKYLADSDVEVVKVNKVTEGRPHIVD 1002

Query: 1103 MVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTV 1162
            M+ NG+I  +V T+SG      D   +RR  L  KV   TT++GA A + AI SL   T 
Sbjct: 1003 MLKNGEIDYIVNTTSGTQAIS-DSSVIRRTALQRKVCYTTTLAGAEATSLAI-SLDEET- 1059

Query: 1163 TMTALQDF 1170
             +  LQD 
Sbjct: 1060 KVRRLQDL 1067


>gi|399546389|ref|YP_006559697.1| carbamoyl-phosphate synthase large subunit [Marinobacter sp.
            BSs20148]
 gi|399161721|gb|AFP32284.1| Carbamoyl-phosphate synthase large chain [Marinobacter sp. BSs20148]
          Length = 1072

 Score = 1236 bits (3198), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 622/1086 (57%), Positives = 790/1086 (72%), Gaps = 23/1086 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILILGAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPAMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+    V +++EKERPDALLPTMGGQTALN A+ L + G L KYGVE+IGA  D 
Sbjct: 63   ATYIEPIIWSTVAKIIEKERPDALLPTMGGQTALNCALDLEKHGVLAKYGVEMIGANADT 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  F +AMK+IG++ P + I + L+E   IA+ +G FP IIRP+FT+GG+GGGI
Sbjct: 123  IDKAEDRSRFDKAMKSIGLECPRADIAHNLEEAHRIADNVG-FPCIIRPSFTMGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+ EFE IC  GL  S TS++L+++SL+GWKEYE+EV+RD  DN +I+C+IEN D MG
Sbjct: 182  AYNRGEFEEICIRGLDLSPTSELLIDESLIGWKEYEMEVVRDKNDNCIIVCAIENFDAMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGVE GGSNVQF ++P  G ++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQIMRNASLAVLREIGVETGGSNVQFGIHPDTGRMVVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKK-TPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL++GY+LD++ NDIT   TPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAIGYTLDELKNDITGGITPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWD- 505
            F FEKFP ++  LTTQMKSVGE MA+GRTFQES QKALR LE G  G     + E D + 
Sbjct: 362  FTFEKFPQADARLTTQMKSVGEVMAIGRTFQESLQKALRGLEVGSDGLD-EMLPEFDSEE 420

Query: 506  -WEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQ 564
              + L   L VP  +R+  I  A + G  V +I   + +D W+L Q ++LI  EQ L   
Sbjct: 421  SRQTLTRELNVPGAERIWFIGDAFRAGQSVADIFRQTHVDPWYLVQIEDLIKEEQALQAS 480

Query: 565  SVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEAN 624
                +     + +KR+GFSD ++A      E   R  R  LG+ P YKRVDTCAAEF ++
Sbjct: 481  GKVELDHATLFRLKRKGFSDARLAKLMGVKEDAFRAMRHGLGIRPVYKRVDTCAAEFASD 540

Query: 625  TPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMN 684
            T YMYSSY+ ECES PT ++K++++GGGPNRIGQGIEFDYCC H + +++  GYETIM+N
Sbjct: 541  TAYMYSSYEEECESNPTDREKIVVIGGGPNRIGQGIEFDYCCVHAALAMREDGYETIMIN 600

Query: 685  SNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDE 744
             NPETVSTDYDTSDRLYFEP+T+EDVL +I +E+P+G+IVQ+GGQTPLKL+         
Sbjct: 601  CNPETVSTDYDTSDRLYFEPITLEDVLEIIHVEKPKGVIVQYGGQTPLKLA--------- 651

Query: 745  HRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKE 804
             R   A+G   V I GTSPD+ID AEDRERF  +I  L ++QP+    +S  + +  A++
Sbjct: 652  -RGLEAAG---VPIIGTSPDAIDCAEDRERFQKLIAGLGLKQPENATVRSHEEGVIAARK 707

Query: 805  IGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDAL 864
            IGYP+VVRPSYVLGGRAMEIVY ++ L  Y+ +AV V  + PVL+D +L+ AIE+D+DA+
Sbjct: 708  IGYPLVVRPSYVLGGRAMEIVYGEDELERYMRSAVLVSNDSPVLLDHFLNAAIEVDIDAI 767

Query: 865  ADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLM 924
             D   +VVIGGIM+HIEQAG+HSGDSAC +P  ++ +   + +     ++A  LNV GLM
Sbjct: 768  CDG-KDVVIGGIMQHIEQAGIHSGDSACSLPPYSLPADVQNAMRDAVKQMALALNVVGLM 826

Query: 925  NCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIP 984
            N Q A    GD+Y++E NPRASRTVPFVSKAIG  LAK AA VM+G SL D GFT+E+IP
Sbjct: 827  NVQLA-WQDGDIYVIEVNPRASRTVPFVSKAIGVSLAKVAARVMAGTSLADQGFTQEIIP 885

Query: 985  KHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTV 1044
             H SVKE+V PF KF   D +LGPEM+STGEVMGI  SF  AF KA +AAG++LP +G  
Sbjct: 886  AHYSVKESVFPFNKFPAVDPILGPEMKSTGEVMGIGDSFDEAFGKAVLAAGERLPSAGVA 945

Query: 1045 FLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMV 1104
            F+SL D+ K   E +A++ +D GF I++T+GTA  L   G+ V  V K+HEGRPH  D +
Sbjct: 946  FMSLRDVDKHGAEHVARSLVDCGFTIIATTGTAAALRKAGVEVALVNKVHEGRPHIVDAI 1005

Query: 1105 ANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTVTM 1164
             NG++Q+++ T+ G      D  ++R+  L  K+   TT++G  A   AI+     TV  
Sbjct: 1006 KNGKVQLVINTTEGRKAVS-DSSQIRQSALQAKISYTTTLAGGEAFCRAIKFGPERTVRR 1064

Query: 1165 TALQDF 1170
              LQD 
Sbjct: 1065 --LQDL 1068


>gi|414343043|ref|YP_006984564.1| carbamoyl phosphate synthase large subunit [Gluconobacter oxydans
            H24]
 gi|411028378|gb|AFW01633.1| carbamoyl phosphate synthase large subunit [Gluconobacter oxydans
            H24]
          Length = 1084

 Score = 1236 bits (3198), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 627/1108 (56%), Positives = 805/1108 (72%), Gaps = 48/1108 (4%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILI+GAGPIVIGQACEFDYSG QACKAL+EEGY VILINSNPATIMTDPGLAD
Sbjct: 3    KRTDIKSILIIGAGPIVIGQACEFDYSGAQACKALREEGYRVILINSNPATIMTDPGLAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+TPE VE+++ KE+PDA+LPTMGGQTALN A+AL +SG L+K+ VELIGA  + 
Sbjct: 63   ATYIEPITPEFVERIILKEKPDAVLPTMGGQTALNAAMALDKSGFLKKHNVELIGADAEV 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I +AEDR  F++AM  IG+++P S I +TL E  +   ++G  P IIRP+FT+GG GGGI
Sbjct: 123  IDRAEDRQKFREAMDEIGIESPRSTIAHTLAEARAALADVG-LPAIIRPSFTMGGAGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEF+ I   GL AS T++VL+E+S+LGWKEYE+EV+RD ADN +IICSIEN+DPMG
Sbjct: 182  AYNREEFDQIVTGGLDASPTTEVLIEESVLGWKEYEMEVVRDTADNCIIICSIENIDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPA TLTDKEYQR+RD S+A +R+IGVE GGSNVQF VNP DG ++VIEMN
Sbjct: 242  VHTGDSITVAPALTLTDKEYQRMRDASLACLRKIGVETGGSNVQFGVNPADGRMVVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRF 447
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDITK TPASFEP+IDYVV KIPRF
Sbjct: 302  PRVSRSSALASKATGFPIAKIAAKLAVGYTLDELKNDITKTTPASFEPTIDYVVAKIPRF 361

Query: 448  AFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDWE 507
             FEKFPGS  LL+T MKSVGEAM++GR+F E+ QK  RS+E G +G    +  E   D  
Sbjct: 362  TFEKFPGSPALLSTSMKSVGEAMSVGRSFAEAIQKGFRSMETGLTGL---DPVEAPGDGS 418

Query: 508  QLKY--SLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELI----DVEQFL 561
            +  Y  +L  P P+R+     A++ G+ V+E+ +    + WFL Q +++I    DVE+  
Sbjct: 419  KDAYLAALAEPRPERILMAAQALRAGLTVEEVQQACKFEPWFLRQLEDIIASERDVEK-- 476

Query: 562  LTQSVSNMTKD--DFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAA 619
                 + + KD   F  +K +GFSD Q+A  +     +V  +R +L V+P Y+R+DTCAA
Sbjct: 477  -----NGLPKDAYGFRRLKAQGFSDAQLARLSGQNVPDVAAQREALNVVPVYRRIDTCAA 531

Query: 620  EFEANTPYMYSSYDF-----ECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQ 674
            EF ++TPY+YS+Y+      ECES PT + K++ILGGGPNRIGQGIEFDYCC H +++L+
Sbjct: 532  EFASDTPYLYSTYEGGFGTPECESKPTSRDKIIILGGGPNRIGQGIEFDYCCVHATYALR 591

Query: 675  SAGYETIMMNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLE----RPEGIIVQFGGQT 730
             AG+ET+M+N NPETVSTDYDTSDRLYFEPLT EDV+ +I  E    +  G IVQ+GGQT
Sbjct: 592  EAGFETVMVNCNPETVSTDYDTSDRLYFEPLTAEDVIALIRTEARGGKILGCIVQYGGQT 651

Query: 731  PLKLSLPIHQYLDEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGG 790
            PLKLS    + L+E  +P         + GT  D+ID AEDRERF  ++++L + QP+ G
Sbjct: 652  PLKLS----RALEEAGIP---------LLGTPADAIDRAEDRERFQTMLRKLGLRQPRNG 698

Query: 791  IAKSEADALAIAKEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVE-VDPE---RP 846
            IA++ ADA  IA+E+GYPVV RPSYVLGGRAMEIVY +  L  YL   +    PE    P
Sbjct: 699  IARTPADAEKIAEEVGYPVVARPSYVLGGRAMEIVYDNAGLKHYLNTVLRAAGPEVSTGP 758

Query: 847  VLIDKYLSDAIEIDVDALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDT 906
            +L+D YL+DAIE DVD +AD    V + G+MEHIE+AG+HSGDSAC +P  T+S + +  
Sbjct: 759  ILLDHYLNDAIEADVDCIADG-ETVYVAGVMEHIEEAGIHSGDSACSLPPYTLSPALVTE 817

Query: 907  ISSWTIKLAKRLNVCGLMNCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAAL 966
            + S T  +A+ L + GLMN QYAI    +V++LE NPRASRTVPFV+KA G P+AK  A 
Sbjct: 818  LRSQTEAMARELGIRGLMNVQYAIKDQ-EVFVLEVNPRASRTVPFVAKATGVPVAKIGAR 876

Query: 967  VMSGKSLNDLGFTKEVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIA 1026
            VM+G  L++       +  HV+VKEAV PF +F   D +LGPEMRSTGEVMG+D SF  A
Sbjct: 877  VMAGARLSEFRLDGGAVSPHVAVKEAVFPFHRFANADTILGPEMRSTGEVMGLDSSFERA 936

Query: 1027 FAKAQIAAGQKLPLSGTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIA 1086
            FAK+Q+AAG KLPLSGTVFLS+ D  K H++ +A+  +++GF I++TSGTA  LE   I 
Sbjct: 937  FAKSQLAAGVKLPLSGTVFLSVRDSDKGHVQPLARKLVEMGFTILATSGTASRLEAANIP 996

Query: 1087 VERVLKMHEGRPHAGDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSG 1146
            V+RV K+ +GRP+  D + +G +QM++ TS G    + D   +RR  L   VP  TT++G
Sbjct: 997  VKRVNKVMQGRPNCVDAIRSGDVQMVINTSQGGQAAR-DSYDIRRGALTMGVPHYTTIAG 1055

Query: 1147 ALANAEAIRSLKSNTVTMTALQDFFDVE 1174
            A A   AI  LK   + +  LQ +F  E
Sbjct: 1056 ARAATYAIAVLKEGDLGVAPLQSYFKGE 1083


>gi|148244935|ref|YP_001219629.1| carbamoyl-phosphate synthase large subunit [Candidatus
            Vesicomyosocius okutanii HA]
 gi|146326762|dbj|BAF61905.1| carbamoyl-phosphate synthase large subunit [Candidatus
            Vesicomyosocius okutanii HA]
          Length = 1068

 Score = 1236 bits (3198), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 613/1087 (56%), Positives = 793/1087 (72%), Gaps = 24/1087 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KR DL  ILI+GAGPIVIGQACEFDYSG QAC AL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRQDLSSILIIGAGPIVIGQACEFDYSGAQACSALREEGYRVILVNSNPATIMTDPTMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+   +VE+++E E+PDALLPTMGGQTALN A+ L   G L+K+ VE+IGAK +A
Sbjct: 63   STYIEPIEWRIVEKIIEVEKPDALLPTMGGQTALNCALDLERHGVLDKHCVEMIGAKKEA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDRDLF++AM  IG+  P + + + ++E  +I   +G FP +IRP+FT+GG+GGGI
Sbjct: 123  INKAEDRDLFREAMLKIGLDMPKAAVAHNMEEAFTIQETVG-FPTVIRPSFTMGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYNK+EF  IC+ GL  S  +++LVE+S+LGWKE+ELEV+RD  DN +IICSIEN DP+G
Sbjct: 182  AYNKDEFVKICECGLDLSPINELLVEESILGWKEFELEVIRDRKDNCIIICSIENFDPIG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            +HTGDSITVAPAQTLTDKEYQ +RD S+A++REIGV+ GGSNVQFA+NP +G + +IEMN
Sbjct: 242  IHTGDSITVAPAQTLTDKEYQAMRDASLAVLREIGVDTGGSNVQFALNPENGRLTIIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITK-KTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL++GY+LD++ NDIT  KTPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAIGYTLDELNNDITNGKTPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWD- 505
            FAFEKFPG+   LTTQMKSVGE MA+G TFQES QKALR LE      G   + +L+ D 
Sbjct: 362  FAFEKFPGANDRLTTQMKSVGEVMAIGSTFQESLQKALRGLET--DKVGLDPIVDLNADD 419

Query: 506  -WEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQ 564
               +++        DR+  +  A + GM + E+ +LS +D WFL Q +++I  E  + + 
Sbjct: 420  ARNKIRSECISARSDRIFYLADAFRLGMSLKEVFDLSKVDSWFLAQIQDIIATELQINST 479

Query: 565  SVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEAN 624
            +V+++  D  + +KR+GFSD ++A      E  VRE+R +L V   +KRVD+CAAEF+  
Sbjct: 480  NVTDIDADKMFSLKRKGFSDARLAQLFCCNESSVRERRHALNVKSVFKRVDSCAAEFDTQ 539

Query: 625  TPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMN 684
            T Y+YS+Y  ECE+ PT KKK++ILGGGPNRIGQGIEFDYCC H S +L+  G+ETIM+N
Sbjct: 540  TAYLYSTYQLECEANPTDKKKIMILGGGPNRIGQGIEFDYCCVHASLALREDGFETIMVN 599

Query: 685  SNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDE 744
             NPETVSTDYD SDRLYFEPLT+EDVL +ID+E P+GIIV +GGQTPLKL+  + +    
Sbjct: 600  CNPETVSTDYDISDRLYFEPLTLEDVLAIIDIENPDGIIVHYGGQTPLKLAKALEK---- 655

Query: 745  HRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKE 804
                  SG     I GT+PD+ID AEDRERF+ ++++L ++QP  G A+S   A  IA  
Sbjct: 656  ------SG---ANIIGTTPDAIDLAEDRERFSKMLQDLKLKQPLNGTARSLEQAQDIANA 706

Query: 805  IGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDAL 864
            IG+P+VVRPSYVLGGRAM+IVY  ++L  Y+  AV+V  + P+L+D +L  AIE+D+DA+
Sbjct: 707  IGFPLVVRPSYVLGGRAMKIVYDKDSLEHYMYTAVKVSNDSPILLDSFLDHAIEVDIDAI 766

Query: 865  ADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLM 924
             D   NVVIGGIM+HIEQAG+HSGDSAC +P  ++++  LD + +  I +AK+LNV GLM
Sbjct: 767  CDG-ENVVIGGIMQHIEQAGIHSGDSACSLPPYSLTNKVLDEMRAQVILMAKKLNVVGLM 825

Query: 925  NCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIP 984
            N Q A   +G++Y++E NPRASRTVPFVSKAIG PLA  AA VMSG SL    FTKE+IP
Sbjct: 826  NTQLAY-QNGEIYIIEVNPRASRTVPFVSKAIGVPLANIAARVMSGVSLKAQNFTKEIIP 884

Query: 985  KHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTV 1044
            +H SVKEAV PF KF G D +LGPEMRSTGEVMG+   F  AF KAQ+AAG ++P +G V
Sbjct: 885  EHFSVKEAVFPFNKFLGVDPILGPEMRSTGEVMGVGKDFASAFDKAQLAAGSRVPENGKV 944

Query: 1045 FLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMV 1104
            F+SL  L +  L  +    L  GF +VST      L   G+  E + K+ EG PH  DM+
Sbjct: 945  FVSLRKLDRNELINLGNKLLIQGFSLVSTRSNRDMLNAAGLKCEVINKVSEGSPHIIDMI 1004

Query: 1105 ANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTVTM 1164
             N  +  ++I S+ D+    D  ++R + L +K+P  TTV  A A  + ++ +  +  T+
Sbjct: 1005 KNDGVD-LIINSTEDTQGVEDAAEIRCQALTHKIPFTTTVEAAFAMLDGLKVI--DKFTI 1061

Query: 1165 TALQDFF 1171
            T LQ  +
Sbjct: 1062 TKLQSLY 1068


>gi|359727485|ref|ZP_09266181.1| carbamoyl phosphate synthase large subunit [Leptospira weilii str.
            2006001855]
          Length = 1106

 Score = 1236 bits (3198), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 635/1119 (56%), Positives = 803/1119 (71%), Gaps = 58/1119 (5%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            +R D+R +LILG+GPIVIGQACEFDYSGTQA KALKE+G  VIL+NSNPATIMTDP LAD
Sbjct: 3    RREDIRSVLILGSGPIVIGQACEFDYSGTQAAKALKEKGIRVILLNSNPATIMTDPDLAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TY+ PMT  +V+++LEKE+PDA+LPT+GGQTALNLA+A   +G LEKY VELIGAK+DA
Sbjct: 63   ATYVEPMTVSVVQKILEKEKPDAILPTVGGQTALNLALACNGAGLLEKYNVELIGAKVDA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            IKKAEDR+LFK+AM+ IGV+ P SG+ N L +   I  ++G  PLI+RPAFTLGGTGGGI
Sbjct: 123  IKKAEDRELFKKAMEKIGVRVPASGLANNLTDAAEIKKKLG-LPLIVRPAFTLGGTGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AY +E FE +   GL AS  SQVL+E+S+LGWKE+ELEVMRDLADNVVIICSIEN+DPMG
Sbjct: 182  AYTEETFEEVVSKGLKASPISQVLLEESVLGWKEFELEVMRDLADNVVIICSIENIDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAP QTL+DKEYQ LRD SIAIIREIGVE GGSN+QFAVNP +G+V+VIEMN
Sbjct: 242  VHTGDSITVAPQQTLSDKEYQNLRDMSIAIIREIGVETGGSNIQFAVNPANGDVIVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRF 447
            PRVSRSSALASKATGFPIAK+AA LS+GY+LD+I NDIT+ TPASFEPSIDYVVTK+PRF
Sbjct: 302  PRVSRSSALASKATGFPIAKIAALLSIGYTLDEIKNDITRVTPASFEPSIDYVVTKVPRF 361

Query: 448  AFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSN-VKEL---- 502
            AFEKFPG++  L  QMK+VGEAMA+GRTF+ESFQKALRSLE    G+G     +EL    
Sbjct: 362  AFEKFPGTDDTLGVQMKAVGEAMAIGRTFKESFQKALRSLEIDRYGFGSDGYFQELLYAR 421

Query: 503  ----DWDWEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVE 558
                D   E +   L+ PN  R+  I  A  +   VD+IH+L  +D+WFL Q ++L+ +E
Sbjct: 422  SLNSDQRKEWIDSFLKRPNDKRIFYIKLAFDEEYTVDQIHDLCKVDRWFLWQMEDLLKLE 481

Query: 559  QFLLTQSVSNMTKDDFYEVKRRGFSDKQIAFAT--------------------------K 592
            +    +    ++K     +K+ GFS++Q++F                            K
Sbjct: 482  KEYSEKGNLVLSK-----MKQAGFSNRQLSFLKNKKRILDLLDGELRVDLKKTEIQNLLK 536

Query: 593  STEKEVREKRLSLGVIPSYKRVDTCAAEFEANTPYMYSSYDFECESAPTQKKKVLILGGG 652
             +E+E+  K  S  ++P YKR+DTCA EFEA TPY YSSYD E ES  T  K V+ILGGG
Sbjct: 537  KSEEEIETKLGSEKILPVYKRIDTCAGEFEAYTPYFYSSYDEEDESDVTSTKSVMILGGG 596

Query: 653  PNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSNPETVSTDYDTSDRLYFEPLTVEDVLN 712
            PNRIGQGIEFDYCCC  S++LQ  G E+IM+NSNPETVSTDYDTSDRLYFEPLT+EDV  
Sbjct: 597  PNRIGQGIEFDYCCCQASYALQDLGIESIMVNSNPETVSTDYDTSDRLYFEPLTLEDVYR 656

Query: 713  VIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHRLPSASGDGLVRIWGTSPDSIDAAEDR 772
            +   E+PEG+I+QFGGQTPLKL+  + +           G   V+I GTSPDSID AEDR
Sbjct: 657  IYQNEKPEGVIIQFGGQTPLKLAKDLER----------KG---VKILGTSPDSIDRAEDR 703

Query: 773  ERFNAIIKELSIEQPKGGIAKSEADALAIAKEIGYPVVVRPSYVLGGRAMEIVYTDETLV 832
            +RF  ++++L +  P+ GIA S  +A  IA++I YPV+VRPSYVLGGRAM I+  ++ L 
Sbjct: 704  KRFVEVLEKLKLNSPESGIATSMEEAREIAQKITYPVLVRPSYVLGGRAMLIINEEKELD 763

Query: 833  TYLENAVEVDPERPVLIDKYLSDAIEIDVDALADSCGNVVIGGIMEHIEQAGVHSGDSAC 892
             Y+E A E+  +RP+LID +L DA+E+DVDAL D    V + GIMEHIE+AGVHSGDSAC
Sbjct: 764  RYMEKAEEISKDRPLLIDSFLEDAVEVDVDALCDG-KEVFVTGIMEHIEEAGVHSGDSAC 822

Query: 893  MIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNCQYAITTSGDVYLLEANPRASRTVPFV 952
            ++P +T+S + +D I   T+ LA  L V GL+N QYA+     +Y++E NPRASRTVPFV
Sbjct: 823  ILPPQTLSKNMMDEIRRATVDLALELQVKGLINIQYAVKNEV-LYIIEVNPRASRTVPFV 881

Query: 953  SKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRS 1012
            SKA+GHP+ KYA  +M G+SL  L   KE+    VSVKE VLPF KF G D +LGPEMRS
Sbjct: 882  SKALGHPIVKYATRIMMGESLKSLPLPKEMAFSQVSVKEVVLPFNKFPGVDTILGPEMRS 941

Query: 1013 TGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVFLSLNDLTKPHLERIAKAFLDIGFKIVS 1072
            TGEVMGI  +   AF K+Q  AG +LP  GTVF+S+ND TK  L    K   ++GF +++
Sbjct: 942  TGEVMGIASTVGEAFLKSQYMAGDELPSQGTVFVSINDKTKSELLSYIKDLSELGFNLIA 1001

Query: 1073 TSGTAHFLELKGIAVERVLKMH-EGRPHAGDMVANGQIQMMVITSSGDSLDQIDGLKLRR 1131
            TSGT  FL   GI   ++ K++ E  P A D +   +I  ++I +    + + D   +R+
Sbjct: 1002 TSGTHKFLSDNGILSSKINKVYDEIFPTALDYIRENKIH-LIINTPLSRVTRDDSFTIRQ 1060

Query: 1132 RGLAYKVPVITTVSGALANAEAIRSLKSNTVTMTALQDF 1170
              + +KVP +TT + A A  + +  +K+   T+ +LQ+ 
Sbjct: 1061 AAIRFKVPCLTTSNAAKALIKGMVEMKNKGFTIHSLQEI 1099


>gi|158422769|ref|YP_001524061.1| carbamoyl-phosphate synthase large subunit [Azorhizobium caulinodans
            ORS 571]
 gi|158329658|dbj|BAF87143.1| carbamoyl-phosphate synthase large subunit [Azorhizobium caulinodans
            ORS 571]
          Length = 1107

 Score = 1236 bits (3197), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 633/1123 (56%), Positives = 802/1123 (71%), Gaps = 58/1123 (5%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTDL  ILI+GAGPIVIGQACEFDYSGTQACKAL+EEGY V+L+NSNPATIMTDP +AD
Sbjct: 3    KRTDLETILIVGAGPIVIGQACEFDYSGTQACKALREEGYRVVLVNSNPATIMTDPDMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPD-----ALLPTMGGQTALNLAVALAESGALEKYGVELIG 202
             TYI P+TPE+V +++EKER D     ALLPTMGGQTALN A++L + G LEK+ VE+IG
Sbjct: 63   VTYIEPITPEIVAKIIEKERGDRSKGFALLPTMGGQTALNCALSLKKMGTLEKFDVEMIG 122

Query: 203  AKLDAIKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGG 262
            A  +AI KAEDR+LF+ AM  IG+ TP S    TL E +   +E+G  P IIRP+FT+GG
Sbjct: 123  ATAEAIDKAEDRELFRDAMTKIGLDTPRSRQIKTLGEALEALDEVG-LPAIIRPSFTMGG 181

Query: 263  TGGGIAYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIEN 322
            TGGGIAYNK EF  I + G+ AS T++VLVE+S+LGWKEYE+EV+RD ADN +I+CSIEN
Sbjct: 182  TGGGIAYNKAEFIEIIERGIDASPTNEVLVEESVLGWKEYEMEVVRDKADNCIIVCSIEN 241

Query: 323  VDPMGVHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVM 382
            +DPMGVHTGDSITVAPA TLTDKEYQ +RD S+A++REIGVE GGSNVQFA++P  G ++
Sbjct: 242  LDPMGVHTGDSITVAPALTLTDKEYQIMRDASLAVLREIGVETGGSNVQFAIDPASGRMI 301

Query: 383  VIEMNPRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVV 441
            VIEMNPRVSRSSALASKATGFPIAK+AA+L+VGY+LD+I NDIT   TPASFEP+IDYVV
Sbjct: 302  VIEMNPRVSRSSALASKATGFPIAKVAARLAVGYTLDEIANDITGGATPASFEPTIDYVV 361

Query: 442  TKIPRFAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKE 501
            TKIPRFAFEKFPG++  LTT MKSVGEAMA+GRTFQES QKALRSLE G +G    +++ 
Sbjct: 362  TKIPRFAFEKFPGADNTLTTSMKSVGEAMAIGRTFQESLQKALRSLETGLTGLDEIDIEG 421

Query: 502  LDW--DWEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQ 559
            L    D   ++ ++ VP PDR+  +  AM+ G+   +IH    ID WFL Q + ++D E 
Sbjct: 422  LGQGDDGSAIRAAIGVPTPDRLLKVAQAMRFGLTDAQIHAACKIDPWFLEQIRAIVDTEA 481

Query: 560  FLLTQSVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAA 619
             +    +   T      +K +GFSD ++A      E EVRE+R +L V P+YKR+DTCAA
Sbjct: 482  KVRKFGLPT-TPGALRALKAQGFSDARLATLAGIGEAEVRERRHALDVRPAYKRIDTCAA 540

Query: 620  EFEANTPYMYSSYD------FECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSL 673
            EF + T YMYS+Y+         E+ P++++KV+ILGGGPNRIGQGIEFDYCCCH +F+L
Sbjct: 541  EFASPTAYMYSTYEAPFAGKLADEAQPSEREKVVILGGGPNRIGQGIEFDYCCCHAAFAL 600

Query: 674  QSAGYETIMMNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERP----EGIIVQFGGQ 729
            + AGYE IM+N NPETVSTDYDTSDRLYFEPLT EDVL +ID ER     +G+IVQFGGQ
Sbjct: 601  KDAGYEAIMVNCNPETVSTDYDTSDRLYFEPLTSEDVLELIDRERTKGTLKGVIVQFGGQ 660

Query: 730  TPLKLSLPIHQYLDEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKG 789
            TPLKL+    + L+E  +P         I GTSPD+ID AEDR+RF  ++ +L + QP  
Sbjct: 661  TPLKLA----RALEEADVP---------ILGTSPDAIDLAEDRDRFKHLLDKLKLRQPAN 707

Query: 790  GIAKSEADALAIAKEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAV---------- 839
            GIA S      +A E+GYP+VVRPSYVLGGRAM+I+  D  L  YL + +          
Sbjct: 708  GIAYSVEQGRTVASELGYPLVVRPSYVLGGRAMQIIRDDSQLGDYLLDTLPGLVPQDVKS 767

Query: 840  -----------EVDPERPVLIDKYLSDAIEIDVDALADSCGNVVIGGIMEHIEQAGVHSG 888
                        V  + P+L D+YLSDAIE+DVDAL D   +V I GIMEHIE+AG+HSG
Sbjct: 768  RYPNDKTGQINTVLGKNPLLFDRYLSDAIEVDVDALCDG-KDVFIAGIMEHIEEAGIHSG 826

Query: 889  DSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNCQYAITTSGDVYLLEANPRASRT 948
            DSAC +P  ++    +  +   T  +A  L V GLMN QYAI   G +Y+LE NPRASRT
Sbjct: 827  DSACSLPPHSLDEDTIAALEKQTAAMALALGVGGLMNVQYAI-KDGVIYVLEVNPRASRT 885

Query: 949  VPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPKHVSVKEAVLPFEKFQGCDVLLGP 1008
            VPFV+K IG P+AK AA VM+G+ +   G  K  + KH++VKEAV PF +F G D +LGP
Sbjct: 886  VPFVAKVIGSPIAKIAARVMAGEKIASFGLKKSTL-KHIAVKEAVFPFARFPGVDTVLGP 944

Query: 1009 EMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVFLSLNDLTKPHLERIAKAFLDIGF 1068
            EMRSTGEVMG+D  + +AFAK+Q+  G K+P SGTVF+S+ D  KP +    K  +D+GF
Sbjct: 945  EMRSTGEVMGLDTDYGVAFAKSQLGGGTKVPKSGTVFVSVKDSDKPRILPTIKMLVDLGF 1004

Query: 1069 KIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVANGQIQMMVITSSGDSLDQIDGLK 1128
            K+++TSGT  FL   G+   ++ K+ EGRPH  D + NG +Q++  T+ G      D   
Sbjct: 1005 KVIATSGTQRFLAENGVEAGKINKVLEGRPHIVDDIKNGGVQLVFNTTEGQQALS-DSRS 1063

Query: 1129 LRRRGLAYKVPVITTVSGALANAEAIRSLKSNTVTMTALQDFF 1171
            LRR  L +KVP  TT+SGA+A A+ I++   + + + ALQ +F
Sbjct: 1064 LRRAALLHKVPYYTTLSGAIAAAQGIKAYVGDDLQVRALQSYF 1106


>gi|418744961|ref|ZP_13301306.1| carbamoyl-phosphate synthase, large subunit [Leptospira santarosai
            str. CBC379]
 gi|410794292|gb|EKR92202.1| carbamoyl-phosphate synthase, large subunit [Leptospira santarosai
            str. CBC379]
          Length = 1097

 Score = 1236 bits (3197), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 634/1112 (57%), Positives = 802/1112 (72%), Gaps = 58/1112 (5%)

Query: 95   ILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLADRTYITPM 154
            +LILG+GPIVIGQACEFDYSGTQA KALKE+G  V+L+NSNPATIMTDP LAD TY+ PM
Sbjct: 1    MLILGSGPIVIGQACEFDYSGTQAAKALKEKGIRVVLLNSNPATIMTDPDLADATYVEPM 60

Query: 155  TPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDAIKKAEDR 214
            T  +V+++LEKE+PDA+LPT+GGQTALNLA+A   +G LEKY VELIGAK+DAIKKAEDR
Sbjct: 61   TVPVVQKILEKEKPDAILPTVGGQTALNLALACNSAGLLEKYNVELIGAKVDAIKKAEDR 120

Query: 215  DLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGIAYNKEEF 274
            +LFK+AM+ IGV+ P SG+ N L + + I  ++G  PLI+RPAFTLGGTGGGIAY +E F
Sbjct: 121  ELFKKAMEKIGVRVPASGLANNLTDAVEIKKKLG-LPLIVRPAFTLGGTGGGIAYTEETF 179

Query: 275  EAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMGVHTGDSI 334
            E     GL AS  SQVL+E+S+LGWKE+ELEVMRDLADNVVIICSIEN+DPMGVHTGDSI
Sbjct: 180  EETVSKGLKASPISQVLLEESVLGWKEFELEVMRDLADNVVIICSIENLDPMGVHTGDSI 239

Query: 335  TVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMNPRVSRSS 394
            TVAP QTL+DKEYQ LRD SIAIIREIGVE GGSN+QFAVNP +G+V+VIEMNPRVSRSS
Sbjct: 240  TVAPQQTLSDKEYQNLRDMSIAIIREIGVETGGSNIQFAVNPENGDVIVIEMNPRVSRSS 299

Query: 395  ALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRFAFEKFPG 454
            ALASKATGFPIAK+AA LS+GY+LD+I NDIT+ TPASFEPSIDYVVTK+PRFAFEKFPG
Sbjct: 300  ALASKATGFPIAKIAALLSIGYTLDEIKNDITRVTPASFEPSIDYVVTKVPRFAFEKFPG 359

Query: 455  SEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSN-VKEL--------DWD 505
            ++  L  QMK+VGEAMA+GRTF+ESFQKALRSLE    G+G     +EL        D  
Sbjct: 360  TDDTLGVQMKAVGEAMAIGRTFKESFQKALRSLEIDRYGFGSDGYFQELLYARSLNSDQR 419

Query: 506  WEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQS 565
             E +   L+ PN  R+  I  A  +G  VD+IH+L  +D+WFL Q ++L+ +E+    + 
Sbjct: 420  KEWIDSFLKRPNDKRIFYIKLAFDEGYTVDQIHDLCKVDRWFLWQMEDLLKLEKEYSEKG 479

Query: 566  VSNMTKDDFYEVKRRGFSDKQIAFAT--------------------------KSTEKEVR 599
             S ++K     +KR GFS++Q++F                            K +E+E+ 
Sbjct: 480  NSVLSK-----MKRAGFSNRQLSFLKNKKRILNLLDDGLRVDLKKTEIQNLLKKSEEEIE 534

Query: 600  EKRLSLGVIPSYKRVDTCAAEFEANTPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQG 659
             +  S  + P YKR+DTCA EFEA TPY YSSYD E ES  T  K V+ILGGGPNRIGQG
Sbjct: 535  AELGSEKIFPVYKRIDTCAGEFEAYTPYFYSSYDEEDESDVTSAKSVMILGGGPNRIGQG 594

Query: 660  IEFDYCCCHTSFSLQSAGYETIMMNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERP 719
            IEFDYCCC  S++LQ  G E+IM+NSNPETVSTDYDTSDRLYFEPLT+EDVL +   E+P
Sbjct: 595  IEFDYCCCQASYALQDLGVESIMINSNPETVSTDYDTSDRLYFEPLTLEDVLAIYQNEKP 654

Query: 720  EGIIVQFGGQTPLKLSLPIHQYLDEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAII 779
            EG+I+QFGGQTPLKL+  + +           G   V+I GTSPDSID AEDR+RF  ++
Sbjct: 655  EGVIIQFGGQTPLKLAKDLER----------KG---VKILGTSPDSIDRAEDRKRFVEVL 701

Query: 780  KELSIEQPKGGIAKSEADALAIAKEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAV 839
            ++L +  P+ GIA S  +A  IA++I YPV+VRPSYVLGGRAM I+  ++ L  Y+E A 
Sbjct: 702  EKLKLHSPESGIATSMEEAREIAQKIKYPVLVRPSYVLGGRAMLIINEEKELDRYMEKAE 761

Query: 840  EVDPERPVLIDKYLSDAIEIDVDALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTI 899
            E+  +RP+LID +L DA+E+DVDAL D   +V I GIMEHIE+AGVHSGDSAC++P +T+
Sbjct: 762  EISKDRPLLIDSFLEDAVEVDVDALCDG-KDVFITGIMEHIEEAGVHSGDSACVLPPQTL 820

Query: 900  SSSCLDTISSWTIKLAKRLNVCGLMNCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHP 959
            S + +D I   T  LA  L V GL+N QYA+     +Y++E NPRASRTVPFVSKA+GHP
Sbjct: 821  SKNMMDEIRKATADLALELQVKGLINIQYAVKNEV-LYIIEVNPRASRTVPFVSKALGHP 879

Query: 960  LAKYAALVMSGKSLNDLGFTKEVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGI 1019
            + KYA  +M G+SL  L   KE+    VSVKE VLPF KF G D +LGPEMRSTGEVMGI
Sbjct: 880  IVKYATRIMMGESLKSLPLPKEMAFSQVSVKEVVLPFNKFPGVDTILGPEMRSTGEVMGI 939

Query: 1020 DMSFPIAFAKAQIAAGQKLPLSGTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHF 1079
              +   AF K+Q  AG +LP  GTVF+S+ND TK  L    +   ++GF +++TSGT  F
Sbjct: 940  ASTAGEAFLKSQYMAGDELPSQGTVFVSINDKTKSELLSYIRDLSELGFNLIATSGTHKF 999

Query: 1080 LELKGIAVERVLKMHEGR-PHAGDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKV 1138
            L   GI   ++ K+++G+ P A D +   +I  ++I +    + + D   +R+  + +KV
Sbjct: 1000 LSDNGILSSKINKVYDGKFPTALDYIRENKIH-LIINTPLSRVTRDDSFTIRQAAIRFKV 1058

Query: 1139 PVITTVSGALANAEAIRSLKSNTVTMTALQDF 1170
            P +TT + A A  + +  +K+   T+ +LQ+ 
Sbjct: 1059 PCLTTSNAAKALIKGMVEMKNKGFTIHSLQEI 1090



 Score =  223 bits (569), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 141/395 (35%), Positives = 220/395 (55%), Gaps = 21/395 (5%)

Query: 90  TDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLADRT 149
           T  + ++ILG GP  IGQ  EFDY   QA  AL++ G E I+INSNP T+ TD   +DR 
Sbjct: 576 TSAKSVMILGGGPNRIGQGIEFDYCCCQASYALQDLGVESIMINSNPETVSTDYDTSDRL 635

Query: 150 YITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDAIK 209
           Y  P+T E V  + + E+P+ ++   GGQT L LA        LE+ GV+++G   D+I 
Sbjct: 636 YFEPLTLEDVLAIYQNEKPEGVIIQFGGQTPLKLA------KDLERKGVKILGTSPDSID 689

Query: 210 KAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGIAY 269
           +AEDR  F + ++ + + +P SGI  +++E   IA +I ++P+++RP++ LGG    I  
Sbjct: 690 RAEDRKRFVEVLEKLKLHSPESGIATSMEEAREIAQKI-KYPVLVRPSYVLGGRAMLIIN 748

Query: 270 NKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMGVH 329
            ++E +   +     S    +L++  L    E +++ + D  D V I   +E+++  GVH
Sbjct: 749 EEKELDRYMEKAEEISKDRPLLIDSFLEDAVEVDVDALCDGKD-VFITGIMEHIEEAGVH 807

Query: 330 TGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVM-VIEMNP 388
           +GDS  V P QTL+      +R  +  +  E+ V+ G  N+Q+AV     EV+ +IE+NP
Sbjct: 808 SGDSACVLPPQTLSKNMMDEIRKATADLALELQVK-GLINIQYAVK---NEVLYIIEVNP 863

Query: 389 RVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRFA 448
           R SR+    SKA G PI K A ++ +G SL  +P     K  A  + S+  VV       
Sbjct: 864 RASRTVPFVSKALGHPIVKYATRIMMGESLKSLP---LPKEMAFSQVSVKEVV-----LP 915

Query: 449 FEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKA 483
           F KFPG + +L  +M+S GE M +  T  E+F K+
Sbjct: 916 FNKFPGVDTILGPEMRSTGEVMGIASTAGEAFLKS 950


>gi|417305751|ref|ZP_12092698.1| carbamoyl-phosphate synthase, large subunit [Rhodopirellula baltica
            WH47]
 gi|327537941|gb|EGF24638.1| carbamoyl-phosphate synthase, large subunit [Rhodopirellula baltica
            WH47]
          Length = 1083

 Score = 1236 bits (3197), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 631/1092 (57%), Positives = 797/1092 (72%), Gaps = 29/1092 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            +R D++KIL++G+GPIVIGQACEFDYSGTQACKAL+EEGYEV+L+NSNPATIMTDP  AD
Sbjct: 3    RRDDIKKILLIGSGPIVIGQACEFDYSGTQACKALREEGYEVVLVNSNPATIMTDPATAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+T ++VE+V+ KERPDALLPT+GGQT LN+A+ L  +G LEKYGVE+I A    
Sbjct: 63   ATYIEPLTWQIVEKVIAKERPDALLPTLGGQTGLNVAMDLDANGVLEKYGVEMIAANAKV 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAE+R+ FKQAM  IG+         TL +      E+G  P ++RP+FT+GG+G  I
Sbjct: 123  IAKAEEREQFKQAMDKIGLDVCKGFTVRTLADARKALAEVG-LPAVVRPSFTMGGSGSAI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYNK++F+++ + GL  S  ++VL+E+S++GWKEYE+EVMRD  DNVVIIC+IEN DPMG
Sbjct: 182  AYNKDDFDSLVQNGLDQSPVTEVLIEESIIGWKEYEMEVMRDCDDNVVIICAIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTL+DKEYQR+RD S+A+IREIGVE GGSN+QFA+ P  G ++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLSDKEYQRMRDASLAVIREIGVETGGSNIQFAIEPDTGRMIVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRF 447
            PRVSRSSALASKATGFPIAK+AAKL+VGY L ++PNDIT+KT A FEP+IDYVVTK+PRF
Sbjct: 302  PRVSRSSALASKATGFPIAKIAAKLAVGYRLWELPNDITQKTKACFEPTIDYVVTKMPRF 361

Query: 448  AFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDWE 507
            AFEKFP ++  LTTQMKSVGE M++GRTFQESFQKALR LE G  G+G S+ K+L W  E
Sbjct: 362  AFEKFPEADATLTTQMKSVGETMSIGRTFQESFQKALRGLEVGAFGFG-SDPKDL-WGTE 419

Query: 508  ------QLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFL 561
                  +++  L  P  +R+  I  A K GM   EIH L+ ID WFL   ++LI+ E  L
Sbjct: 420  DQPSRDEIRAKLSTPGSERVFYIRYAFKDGMTAAEIHSLTNIDPWFLDHLQQLIETEDNL 479

Query: 562  LT-QSVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAE 620
                 +  +  D   + KRRGFSD+QIA  T  TE +VR KRL +G+ P YK VDTCAAE
Sbjct: 480  RAIGKLDAIDVDTMRDAKRRGFSDRQIATITSKTESQVRAKRLEMGIRPVYKSVDTCAAE 539

Query: 621  FEANTPYMYSSYDFECE-SAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYE 679
            FEA TPY YS+Y+ E E  A   KK+V+ILGGGPNRIGQGIEFDYCCCH SF+LQ  G E
Sbjct: 540  FEAFTPYYYSTYESETEVPAKGDKKRVVILGGGPNRIGQGIEFDYCCCHASFALQEMGIE 599

Query: 680  TIMMNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIH 739
            +IM+NSNPETVSTDYDTSD L+FEPLT+EDVLN+ D  +P+G+IVQFGGQTPL L+  + 
Sbjct: 600  SIMVNSNPETVSTDYDTSDILFFEPLTIEDVLNICDAMQPDGVIVQFGGQTPLNLARGLE 659

Query: 740  QYLDEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADAL 799
            Q               V I GTS D+ID AEDRE F+++I EL + QP  GIA++  +A 
Sbjct: 660  Q-------------AGVPIIGTSVDTIDTAEDRELFSSLIDELGLRQPPSGIARNMDEAR 706

Query: 800  AIAKEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEI 859
              AK IGYP +VRPS+VLGGRAMEI Y       Y+  A  V   +PVLID++L DA E+
Sbjct: 707  VEAKRIGYPALVRPSFVLGGRAMEICYDHSQFARYVAEAFIVADGQPVLIDRFLEDATEV 766

Query: 860  DVDALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLN 919
            DVDA++D   N VI GIMEHIE+AGVHSGDSAC IP  +++   L  I   T KLA RLN
Sbjct: 767  DVDAISDG-NNCVIMGIMEHIEEAGVHSGDSACCIPPFSLTQPVLAEIRDATRKLAARLN 825

Query: 920  VCGLMNCQYAITTSG---DVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDL 976
            V GLMN Q+A+   G    +Y+LE NPRASRTVPFV+KA G P+A  A  VM+GK+L +L
Sbjct: 826  VVGLMNIQFAVKMEGTQPTLYILEVNPRASRTVPFVAKATGVPVANLATKVMAGKTLKEL 885

Query: 977  GFTKEVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQ 1036
              T+E IP+HVS+KE+VLPF KF G D++LGPEMRSTGEVMG+   F IAFAK+Q+AAG 
Sbjct: 886  NVTEEPIPRHVSIKESVLPFRKFAGVDIVLGPEMRSTGEVMGVSELFSIAFAKSQLAAGT 945

Query: 1037 KLPLSGTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEG 1096
             LP SG +FLSL+   K   E + K+ +++GF++++T GTA  LE  GIAV RV K+ EG
Sbjct: 946  VLPESGKIFLSLSANHKEAAESLGKSLIELGFELLATEGTAVRLEANGIAVTRVKKLSEG 1005

Query: 1097 RPHAGDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRS 1156
             P+  D + N  +Q+++ T SG      +G K+R  G+ + VP ITT++ A A   A+ +
Sbjct: 1006 HPNLIDYLKNDDVQLILNTPSGKGARTDEG-KIRAAGVQHGVPCITTLAAAEAAVRAMVA 1064

Query: 1157 LKSNTVTMTALQ 1168
            ++   + + +LQ
Sbjct: 1065 MRDTPMEVESLQ 1076


>gi|196228041|ref|ZP_03126908.1| carbamoyl-phosphate synthase, large subunit [Chthoniobacter flavus
            Ellin428]
 gi|196227444|gb|EDY21947.1| carbamoyl-phosphate synthase, large subunit [Chthoniobacter flavus
            Ellin428]
          Length = 1109

 Score = 1236 bits (3197), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 628/1122 (55%), Positives = 804/1122 (71%), Gaps = 57/1122 (5%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            K   L KIL++G+GPIVIGQ CEFDYSG QACKALKEEGYEV+L+NSNPATIMTDP  A 
Sbjct: 3    KDPTLHKILVIGSGPIVIGQGCEFDYSGVQACKALKEEGYEVVLVNSNPATIMTDPEFAH 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
            RTYI P+TPE+V +++E E+PDALLPT+GGQTALN ++ L E G L+K+ V +IGAK +A
Sbjct: 63   RTYIEPITPEVVGKIIEAEKPDALLPTLGGQTALNCSMKLHELGVLQKHNVRMIGAKPEA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I K EDR  FK+AM  IG+  P SG  +T++E   +A EIG  PLIIRPAFTLGG+GGGI
Sbjct: 123  IHKGEDRQAFKEAMIKIGLDLPRSGTAHTMEEGRKVAAEIGTMPLIIRPAFTLGGSGGGI 182

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYNKEEFE I   GL  S  S+VL+E+SLLGWKE+E+EVMRD ADN VIICSIENVDPMG
Sbjct: 183  AYNKEEFEIIVARGLDLSPVSEVLIEESLLGWKEFEMEVMRDKADNCVIICSIENVDPMG 242

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTL+D+EYQ +RD S A+IREIGVE GGSN+QFA+ P  G ++VIEMN
Sbjct: 243  VHTGDSITVAPAQTLSDREYQNMRDASFAVIREIGVETGGSNIQFAIEPNTGRMIVIEMN 302

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRF 447
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT++TPASFEP+IDYVV K+PRF
Sbjct: 303  PRVSRSSALASKATGFPIAKIAAKLAVGYTLDEVKNDITRETPASFEPTIDYVVVKVPRF 362

Query: 448  AFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDWE 507
             FEKFP ++P+LTTQMKSVGEAMA+GRTF+E+ QKALRSLE    G    + K+   D +
Sbjct: 363  TFEKFPQADPVLTTQMKSVGEAMAIGRTFKEALQKALRSLEIKRFGL-IGDGKDAVVDDD 421

Query: 508  QLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELI------------ 555
             L+  L VPN +R+  +  A ++G  V+E+ EL+ +D+WFL   +E++            
Sbjct: 422  TLRTKLTVPNAERIFFLGLAFQRGWTVEEVFELTKVDRWFLENIREVVTAAEQLAASNFG 481

Query: 556  ---------DVEQFLLTQSVSNMTKDDFYEVKRRGFSDKQIAFATKSTEK---------E 597
                     D +     ++ S   K      K+ GFSD Q++   + + K          
Sbjct: 482  ELVDGYTEADSKNLPFDEAKSFSLKAQLRRAKKLGFSDVQLSVLGQRSGKSAAPVFAISH 541

Query: 598  VREKRLSLGVIPSYKRVDTCAAEFEANTPYMYSSYDFECESAPTQKKKVLILGGGPNRIG 657
            +R  +  + V P+Y+ VDTCAAEFEA TPY YS+Y  E E   + KKKV+ILGGGPNRIG
Sbjct: 542  IRHPQ-EINVNPTYRLVDTCAAEFEAYTPYYYSTYGDENERRESGKKKVIILGGGPNRIG 600

Query: 658  QGIEFDYCCCHTSFSLQSAGYETIMMNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLE 717
            QGIEFDYCC H +F+L+  G+ETIM+NSNPETVSTDYDTSD+LYFEPLT+EDVLN+ + E
Sbjct: 601  QGIEFDYCCVHAAFALKELGFETIMVNSNPETVSTDYDTSDKLYFEPLTLEDVLNICEQE 660

Query: 718  RPE--GIIVQFGGQTPLKLSLPIHQYLDEHRLPSASGDGLVRIWGTSPDSIDAAEDRERF 775
                 G+IVQFGGQTPL L+    + L+E  +P         I GTSP SI+ AEDR+ F
Sbjct: 661  SENLFGVIVQFGGQTPLNLA----KGLEEAGVP---------IIGTSPKSIEIAEDRKLF 707

Query: 776  NAIIKELSIEQPKGGIAKSEADALAIAKEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYL 835
             A++ +L I Q  GG A +E  A+  A  +GYPV+VRPS+VLGGR M++V+T+  L  Y+
Sbjct: 708  GAMLDKLGIRQTAGGTAVTEDQAVTAANTVGYPVLVRPSFVLGGRGMQLVHTEADLRKYV 767

Query: 836  ENAVEVDP-------ERPVLIDKYLSDAIEIDVDALADSCGNVVIGGIMEHIEQAGVHSG 888
              A+E  P         P+L+D +L DA+EIDVD ++D    VVIG IMEHIE+AG+HSG
Sbjct: 768  REAIEAAPGATPNTASNPILVDHFLEDALEIDVDCISDG-QTVVIGAIMEHIEEAGIHSG 826

Query: 889  DSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNCQYAITTSGDVYLLEANPRASRT 948
            DSAC IP  ++       I+  T  +AK L+V GLMN Q+A+     VY+LE NPRASRT
Sbjct: 827  DSACAIPPFSLKEEVKAEITKATKAMAKELHVKGLMNVQFAVKDD-VVYVLEVNPRASRT 885

Query: 949  VPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPKHVSVKEAVLPFEKFQGCDVLLGP 1008
             PFVSKAIG PL K AA +M+G++L +LGFTKE+IP H SVKEAV PF +F G D++LGP
Sbjct: 886  APFVSKAIGVPLPKLAAKIMAGQTLQELGFTKEIIPTHYSVKEAVFPFIRFPGIDIMLGP 945

Query: 1009 EMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVFLSLNDLTKPHLERIAKAFLDIGF 1068
            EM+STGEVMGID +  +A+AKAQ+AA   LP  G +F+SL D  KP    IA+ F D+GF
Sbjct: 946  EMKSTGEVMGIDQNLGLAYAKAQMAAQPALPSKGNIFISLADRQKPKSIEIARGFADLGF 1005

Query: 1069 KIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVANGQIQMMVITSSGDSLDQIDGLK 1128
            K+ +TSGTA  L+  GIAV  + K++EGRPHA DM+ NG++ +++ T SG  + + D +K
Sbjct: 1006 KLFATSGTAKALKAAGIAVTSLHKLNEGRPHALDMIKNGELALVINTPSG-KVSREDEVK 1064

Query: 1129 LRRRGLAYKVPVITTVSGALANAEAIRSLKSNTVTMTALQDF 1170
            +R    A ++PVITT+  A A+ E IR+LK + + +  LQ++
Sbjct: 1065 IRSTATANRIPVITTLRAARASLEGIRALKEHGLNVKPLQEW 1106



 Score =  214 bits (545), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 139/411 (33%), Positives = 225/411 (54%), Gaps = 30/411 (7%)

Query: 83  DQKLGKRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTD 142
           D+   + +  +K++ILG GP  IGQ  EFDY    A  ALKE G+E I++NSNP T+ TD
Sbjct: 577 DENERRESGKKKVIILGGGPNRIGQGIEFDYCCVHAAFALKELGFETIMVNSNPETVSTD 636

Query: 143 PGLADRTYITPMTPELVEQVLEKERPD--ALLPTMGGQTALNLAVALAESGALEKYGVEL 200
              +D+ Y  P+T E V  + E+E  +   ++   GGQT LNLA  L E+      GV +
Sbjct: 637 YDTSDKLYFEPLTLEDVLNICEQESENLFGVIVQFGGQTPLNLAKGLEEA------GVPI 690

Query: 201 IGAKLDAIKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTL 260
           IG    +I+ AEDR LF   +  +G++    G   T D+ ++ AN +G +P+++RP+F L
Sbjct: 691 IGTSPKSIEIAEDRKLFGAMLDKLGIRQTAGGTAVTEDQAVTAANTVG-YPVLVRPSFVL 749

Query: 261 GGTGGGIAYNKEEFEAICKAGLAA-------SLTSQVLVEKSLLGWKEYELEVMRDLADN 313
           GG G  + + + +     +  + A       + ++ +LV+  L    E +++ + D    
Sbjct: 750 GGRGMQLVHTEADLRKYVREAIEAAPGATPNTASNPILVDHFLEDALEIDVDCISD-GQT 808

Query: 314 VVIICSIENVDPMGVHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFA 373
           VVI   +E+++  G+H+GDS    P  +L ++    +   + A+ +E+ V+ G  NVQFA
Sbjct: 809 VVIGAIMEHIEEAGIHSGDSACAIPPFSLKEEVKAEITKATKAMAKELHVK-GLMNVQFA 867

Query: 374 VNPVDGEVMVIEMNPRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKK-TPAS 432
           V   D  V V+E+NPR SR++   SKA G P+ K+AAK+  G +L ++    TK+  P  
Sbjct: 868 VK--DDVVYVLEVNPRASRTAPFVSKAIGVPLPKLAAKIMAGQTLQEL--GFTKEIIPTH 923

Query: 433 FEPSIDYVVTKIPRFAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKA 483
           +  S+   V     F F +FPG + +L  +MKS GE M + +    ++ KA
Sbjct: 924 Y--SVKEAV-----FPFIRFPGIDIMLGPEMKSTGEVMGIDQNLGLAYAKA 967


>gi|332526111|ref|ZP_08402249.1| carbamoyl-phosphate synthase large subunit [Rubrivivax
            benzoatilyticus JA2]
 gi|332109954|gb|EGJ10582.1| carbamoyl-phosphate synthase large subunit [Rubrivivax
            benzoatilyticus JA2]
          Length = 1081

 Score = 1235 bits (3196), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 619/1079 (57%), Positives = 803/1079 (74%), Gaps = 29/1079 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KR D+ KILI+GAGPI+IGQACEFDYSG QACKAL+EEGY+VIL+NSNPATIMTDP +AD
Sbjct: 3    KRNDIHKILIIGAGPIIIGQACEFDYSGAQACKALREEGYKVILVNSNPATIMTDPEMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+T ++VE+++ KERPDA+LPTMGGQTALN A+ L   G L KYGVE+IGA   A
Sbjct: 63   VTYIEPITWQVVEKIIAKERPDAILPTMGGQTALNCALDLHRHGVLAKYGVEMIGANEHA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECIS----IANEIGE--FPLIIRPAFTLG 261
            I+KAEDR  FK AM  IG+++  SGI ++++E ++    I +EIG   FP++IRP+FT+G
Sbjct: 123  IEKAEDRMKFKDAMTAIGLESAKSGIAHSMEEALAVQRRIQSEIGGTGFPMVIRPSFTMG 182

Query: 262  GTGGGIAYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIE 321
            GTGGGIAYN EEFE ICK GL  S T ++L+E+SL+GWKEYE+EV+RD ADN +I+CSIE
Sbjct: 183  GTGGGIAYNPEEFEEICKRGLDLSPTKELLIEESLIGWKEYEMEVVRDRADNCIIVCSIE 242

Query: 322  NVDPMGVHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEV 381
            N+DPMG+HTGDSITVAPAQTLTDKEYQ +R+ SIAI+REIGV+ GGSNVQF+VNP +G +
Sbjct: 243  NLDPMGIHTGDSITVAPAQTLTDKEYQLMRNASIAILREIGVDTGGSNVQFSVNPNNGRL 302

Query: 382  MVIEMNPRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYV 440
            +VIEMNPRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT   TPASFEPSIDYV
Sbjct: 303  IVIEMNPRVSRSSALASKATGFPIAKVAAKLAVGYTLDELKNDITGGATPASFEPSIDYV 362

Query: 441  VTKIPRFAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVK 500
            VTKIPRFAFEKFP ++P LTTQMKSVGE MA+GRTFQESFQKALR LE G  G     + 
Sbjct: 363  VTKIPRFAFEKFPAADPHLTTQMKSVGEVMAMGRTFQESFQKALRGLETGIDG-----LT 417

Query: 501  ELDWDWEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQF 560
            E   D +++   +    P+R+  +  A + GM +DE+ E + +D WFL Q ++L+  EQ 
Sbjct: 418  ERSTDRDEIVDEIGNVGPERILFLADAFRIGMTLDEVFEETAVDPWFLAQIQDLVTTEQQ 477

Query: 561  LLTQS-VSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAA 619
            +  ++ ++ ++  +   +K +GFSDK++A    + +  VR +R  LGV P YKRVDTCAA
Sbjct: 478  VAARADLAALSAAELRWLKAKGFSDKRLAKLLGTNQHAVRARRHELGVRPVYKRVDTCAA 537

Query: 620  EFEANTPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYE 679
            EF   T YMYS+YD ECE+ PT KKK+++LGGGPNRIGQGIEFDYCC H + +++  GYE
Sbjct: 538  EFATQTAYMYSTYDEECEAEPTDKKKIMVLGGGPNRIGQGIEFDYCCVHAALAMREDGYE 597

Query: 680  TIMMNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIH 739
            TIM+N NPETVSTDYDTSDRLYFEP+T+EDVL ++D E+P G+IVQ+GGQTPLKL+L + 
Sbjct: 598  TIMVNCNPETVSTDYDTSDRLYFEPVTLEDVLEIVDKEKPVGVIVQYGGQTPLKLALDLE 657

Query: 740  QYLDEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADAL 799
            +               V I GT+PDSID AEDRERF  ++ EL ++QP    A++E  AL
Sbjct: 658  R-------------AGVPIIGTTPDSIDIAEDRERFQKLLHELGLKQPPNRTARTEEQAL 704

Query: 800  AIAKEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEI 859
            A+A EIGYP+VVRPSYVLGGRAMEIV+ D+ L  Y+  AV+V  + PVL+D++L DA+E+
Sbjct: 705  ALAHEIGYPLVVRPSYVLGGRAMEIVHGDKDLERYMREAVKVSDKSPVLLDRFLDDAVEV 764

Query: 860  DVDALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLN 919
            DVD +AD+ G V+IGGIMEH+E AG+HSGDSAC +P  ++S +  D +      +AK L 
Sbjct: 765  DVDCIADATGKVLIGGIMEHVEAAGIHSGDSACSLPPYSLSPALQDEMRRQAAAMAKALG 824

Query: 920  VCGLMNCQYAITTSGD---VYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDL 976
            V GLMN Q+A+   GD   VY+LE NPRASRTVPFVSKA G PLAK AA  M+G+SL++ 
Sbjct: 825  VVGLMNTQFAVQGEGDDAVVYVLEVNPRASRTVPFVSKATGRPLAKIAARCMAGRSLDEQ 884

Query: 977  GFTKEVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQ 1036
            G  +E++P   SVKEAV PF KF G D +LGPEMRSTGEVMG+  +F  A  K+Q+ AG 
Sbjct: 885  GIGEEIVPPFFSVKEAVFPFNKFPGVDPILGPEMRSTGEVMGVGRTFGEAMLKSQLGAGS 944

Query: 1037 KLPLSGTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEG 1096
            +LP  GTV +++ +  K    ++A   +D+G+++++T GTA  +   G+ V+ V K+ +G
Sbjct: 945  RLPEKGTVVITVKNSDKQRAVKVAADLVDLGYEVLATKGTAQAIADAGVPVKLVNKVKDG 1004

Query: 1097 RPHAGDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIR 1155
            RPH  D V  G++Q++  T         D   +R   LA +V   TT++G+ A  EA++
Sbjct: 1005 RPHIADKVKAGEVQLVFTTVDETRTAIADSRYIRTAALANRVTYYTTMAGSEAATEALK 1063


>gi|418755318|ref|ZP_13311525.1| carbamoyl-phosphate synthase, large subunit [Leptospira santarosai
            str. MOR084]
 gi|409964329|gb|EKO32219.1| carbamoyl-phosphate synthase, large subunit [Leptospira santarosai
            str. MOR084]
          Length = 1097

 Score = 1235 bits (3196), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 634/1112 (57%), Positives = 802/1112 (72%), Gaps = 58/1112 (5%)

Query: 95   ILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLADRTYITPM 154
            +LILG+GPIVIGQACEFDYSGTQA KALKE+G  V+L+NSNPATIMTDP LAD TY+ PM
Sbjct: 1    MLILGSGPIVIGQACEFDYSGTQAAKALKEKGIRVVLLNSNPATIMTDPDLADATYVEPM 60

Query: 155  TPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDAIKKAEDR 214
            T  +V+++LEKE+PDA+LPT+GGQTALNLA+A   +G LEKY VELIGAK+DAIKKAEDR
Sbjct: 61   TVPVVQKILEKEKPDAILPTVGGQTALNLALACNSAGLLEKYNVELIGAKVDAIKKAEDR 120

Query: 215  DLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGIAYNKEEF 274
            +LFK+AM+ IGV+ P SG+ N L + + I  ++G  PLI+RPAFTLGGTGGGIAY +E F
Sbjct: 121  ELFKKAMEEIGVRVPASGLANNLTDAVEIKKKLG-LPLIVRPAFTLGGTGGGIAYTEETF 179

Query: 275  EAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMGVHTGDSI 334
            E     GL AS  SQVL+E+S+LGWKE+ELEVMRDLADNVVIICSIEN+DPMGVHTGDSI
Sbjct: 180  EETVSKGLKASPISQVLLEESVLGWKEFELEVMRDLADNVVIICSIENLDPMGVHTGDSI 239

Query: 335  TVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMNPRVSRSS 394
            TVAP QTL+DKEYQ LRD SIAIIREIGVE GGSN+QFAVNP +G+V+VIEMNPRVSRSS
Sbjct: 240  TVAPQQTLSDKEYQNLRDMSIAIIREIGVETGGSNIQFAVNPENGDVIVIEMNPRVSRSS 299

Query: 395  ALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRFAFEKFPG 454
            ALASKATGFPIAK+AA LS+GY+LD+I NDIT+ TPASFEPSIDYVVTK+PRFAFEKFPG
Sbjct: 300  ALASKATGFPIAKIAALLSIGYTLDEIKNDITRVTPASFEPSIDYVVTKVPRFAFEKFPG 359

Query: 455  SEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSN-VKEL--------DWD 505
            ++  L  QMK+VGEAMA+GRTF+ESFQKALRSLE    G+G     +EL        D  
Sbjct: 360  TDDTLGVQMKAVGEAMAIGRTFKESFQKALRSLEIDRYGFGSDGYFQELLYARSLNSDQR 419

Query: 506  WEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQS 565
             E +   L+ PN  R+  I  A  +G  VD+IH+L  +D+WFL Q ++L+ +E+    + 
Sbjct: 420  KEWIDSFLKRPNDKRIFYIKLAFDEGYTVDQIHDLCKVDRWFLWQMEDLLKLEKEYSEKG 479

Query: 566  VSNMTKDDFYEVKRRGFSDKQIAFAT--------------------------KSTEKEVR 599
             S ++K     +KR GFS++Q++F                            K +E+E+ 
Sbjct: 480  NSVLSK-----MKRAGFSNRQLSFLKNKKRILDLLDDGLRVDLKKTEIQNLLKKSEEEIE 534

Query: 600  EKRLSLGVIPSYKRVDTCAAEFEANTPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQG 659
             +  S  + P YKR+DTCA EFEA TPY YSSYD E ES  T  K V+ILGGGPNRIGQG
Sbjct: 535  AELGSEKIFPVYKRIDTCAGEFEAYTPYFYSSYDEEDESDVTSAKSVMILGGGPNRIGQG 594

Query: 660  IEFDYCCCHTSFSLQSAGYETIMMNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERP 719
            IEFDYCCC  S++LQ  G E+IM+NSNPETVSTDYDTSDRLYFEPLT+EDVL +   E+P
Sbjct: 595  IEFDYCCCQASYALQDLGVESIMINSNPETVSTDYDTSDRLYFEPLTLEDVLAIYQNEKP 654

Query: 720  EGIIVQFGGQTPLKLSLPIHQYLDEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAII 779
            EG+I+QFGGQTPLKL+  + +           G   V+I GTSPDSID AEDR+RF  ++
Sbjct: 655  EGVIIQFGGQTPLKLAKDLER----------KG---VKILGTSPDSIDRAEDRKRFVEVL 701

Query: 780  KELSIEQPKGGIAKSEADALAIAKEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAV 839
            ++L +  P+ GIA S  +A  IA++I YPV+VRPSYVLGGRAM I+  ++ L  Y+E A 
Sbjct: 702  EKLKLHSPESGIATSMEEAREIAQKIKYPVLVRPSYVLGGRAMLIINEEKELDRYMEKAE 761

Query: 840  EVDPERPVLIDKYLSDAIEIDVDALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTI 899
            E+  +RP+LID +L DA+E+DVDAL D   +V I GIMEHIE+AGVHSGDSAC++P +T+
Sbjct: 762  EISKDRPLLIDSFLEDAVEVDVDALCDG-KDVFITGIMEHIEEAGVHSGDSACVLPPQTL 820

Query: 900  SSSCLDTISSWTIKLAKRLNVCGLMNCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHP 959
            S + +D I   T  LA  L V GL+N QYA+     +Y++E NPRASRTVPFVSKA+GHP
Sbjct: 821  SKNMMDEIRKATADLALELQVKGLINIQYAVKNEV-LYIIEVNPRASRTVPFVSKALGHP 879

Query: 960  LAKYAALVMSGKSLNDLGFTKEVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGI 1019
            + KYA  +M G+SL  L   KE+    VSVKE VLPF KF G D +LGPEMRSTGEVMGI
Sbjct: 880  IVKYATRIMMGESLKSLPLPKEMAFSQVSVKEVVLPFNKFPGVDTILGPEMRSTGEVMGI 939

Query: 1020 DMSFPIAFAKAQIAAGQKLPLSGTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHF 1079
              +   AF K+Q  AG +LP  GTVF+S+ND TK  L    +   ++GF +++TSGT  F
Sbjct: 940  ASTAGEAFLKSQYMAGDELPSQGTVFVSINDKTKSELLSYIRDLSELGFNLIATSGTHKF 999

Query: 1080 LELKGIAVERVLKMHEGR-PHAGDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKV 1138
            L   GI   ++ K+++G+ P A D +   +I  ++I +    + + D   +R+  + +KV
Sbjct: 1000 LSDNGILSSKINKVYDGKFPTALDYIRENKIH-LIINTPLSRVTRDDSFTIRQAAIRFKV 1058

Query: 1139 PVITTVSGALANAEAIRSLKSNTVTMTALQDF 1170
            P +TT + A A  + +  +K+   T+ +LQ+ 
Sbjct: 1059 PCLTTSNAAKALIKGMVEMKNKGFTIHSLQEI 1090



 Score =  223 bits (569), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 141/395 (35%), Positives = 220/395 (55%), Gaps = 21/395 (5%)

Query: 90  TDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLADRT 149
           T  + ++ILG GP  IGQ  EFDY   QA  AL++ G E I+INSNP T+ TD   +DR 
Sbjct: 576 TSAKSVMILGGGPNRIGQGIEFDYCCCQASYALQDLGVESIMINSNPETVSTDYDTSDRL 635

Query: 150 YITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDAIK 209
           Y  P+T E V  + + E+P+ ++   GGQT L LA        LE+ GV+++G   D+I 
Sbjct: 636 YFEPLTLEDVLAIYQNEKPEGVIIQFGGQTPLKLA------KDLERKGVKILGTSPDSID 689

Query: 210 KAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGIAY 269
           +AEDR  F + ++ + + +P SGI  +++E   IA +I ++P+++RP++ LGG    I  
Sbjct: 690 RAEDRKRFVEVLEKLKLHSPESGIATSMEEAREIAQKI-KYPVLVRPSYVLGGRAMLIIN 748

Query: 270 NKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMGVH 329
            ++E +   +     S    +L++  L    E +++ + D  D V I   +E+++  GVH
Sbjct: 749 EEKELDRYMEKAEEISKDRPLLIDSFLEDAVEVDVDALCDGKD-VFITGIMEHIEEAGVH 807

Query: 330 TGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVM-VIEMNP 388
           +GDS  V P QTL+      +R  +  +  E+ V+ G  N+Q+AV     EV+ +IE+NP
Sbjct: 808 SGDSACVLPPQTLSKNMMDEIRKATADLALELQVK-GLINIQYAVK---NEVLYIIEVNP 863

Query: 389 RVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRFA 448
           R SR+    SKA G PI K A ++ +G SL  +P     K  A  + S+  VV       
Sbjct: 864 RASRTVPFVSKALGHPIVKYATRIMMGESLKSLP---LPKEMAFSQVSVKEVV-----LP 915

Query: 449 FEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKA 483
           F KFPG + +L  +M+S GE M +  T  E+F K+
Sbjct: 916 FNKFPGVDTILGPEMRSTGEVMGIASTAGEAFLKS 950


>gi|212702278|ref|ZP_03310406.1| hypothetical protein DESPIG_00289 [Desulfovibrio piger ATCC 29098]
 gi|212674271|gb|EEB34754.1| carbamoyl-phosphate synthase, large subunit [Desulfovibrio piger ATCC
            29098]
          Length = 1105

 Score = 1235 bits (3196), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 623/1108 (56%), Positives = 807/1108 (72%), Gaps = 42/1108 (3%)

Query: 82   KDQKLGKRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMT 141
            ++  + KRTDL KIL++GAGPIVIGQ CEFDYSG+QA KALKEEGYEV+L+NSNPATIMT
Sbjct: 22   QEHPMPKRTDLHKILVIGAGPIVIGQGCEFDYSGSQAVKALKEEGYEVVLVNSNPATIMT 81

Query: 142  DPGLADRTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELI 201
            DP +AD TYI P+  + +  ++ KERPDALLPT+GGQTALN A+ LA+SG L + GVELI
Sbjct: 82   DPHMADATYIEPIEQQTLAAIIRKERPDALLPTLGGQTALNAALGLAKSGVLAECGVELI 141

Query: 202  GAKLDAIKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLG 261
            GA+ + I+KAE R+LF+QAM+ IG+K P SGI + +DE  ++ + +  FPLIIRPAFTLG
Sbjct: 142  GARAEVIEKAESRELFRQAMENIGLKVPASGIAHNMDEVRALGDVL-PFPLIIRPAFTLG 200

Query: 262  GTGGGIAYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIE 321
            GTGGGIAYN  + E +   GL+AS  S+V++E+S+LGWKE+E+EVMRD  DN VI+CSIE
Sbjct: 201  GTGGGIAYNMADLEEVAGHGLSASPVSEVMIEQSVLGWKEFEMEVMRDKNDNCVIVCSIE 260

Query: 322  NVDPMGVHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEV 381
            NVD MGVHTGDSITVAPAQTLTD EYQ +RD S AI+REIGVE GGSNVQF +NP +GE+
Sbjct: 261  NVDAMGVHTGDSITVAPAQTLTDAEYQMMRDASFAIMREIGVETGGSNVQFGINPDNGEM 320

Query: 382  MVIEMNPRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVV 441
            +VIEMNPRVSRSSALASKATGFPIAK+AAKL++GY+LD++ NDIT++T ASFEP+IDY V
Sbjct: 321  VVIEMNPRVSRSSALASKATGFPIAKLAAKLAIGYTLDELRNDITRETAASFEPAIDYCV 380

Query: 442  TKIPRFAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKE 501
             KIPRF FEKFPG++  LTT MKSVGEAM++GRTF+E+ QK LRS+E G SG G +  +E
Sbjct: 381  VKIPRFTFEKFPGAKDELTTSMKSVGEAMSIGRTFKEALQKGLRSMEIGASGLGFNFRRE 440

Query: 502  LDWDWEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFL 561
            L     ++   LR P+  R+  +  A+  G+ V++IHE S ID WF+ Q ++++D+E  +
Sbjct: 441  LP-PLPEIMAGLRKPHSRRIFTLRQALLAGVSVEDIHEASGIDPWFIRQMRDIVDMETRI 499

Query: 562  LTQSVSN-MT------KDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRV 614
                ++N MT       +   E K  GFSD+Q++   K  E ++R  R  +G++P++  V
Sbjct: 500  RDFGLANDMTPLNPELPEILREAKEYGFSDRQLSEMWKRPETDIRRLRKEMGIVPTFYLV 559

Query: 615  DTCAAEFEANTPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQ 674
            DTCAAEFEA TPY YS+Y+   E      +KVLILGGGPNRIGQGIEFDYCCCH SF+L+
Sbjct: 560  DTCAAEFEAYTPYYYSTYEKGDEVQTKDCRKVLILGGGPNRIGQGIEFDYCCCHASFALR 619

Query: 675  SAGYETIMMNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKL 734
             AG   IM+NSNPETVSTDYDTSDRLYFEPLT EDV+N+++ E+PEG+IVQFGGQTPL L
Sbjct: 620  DAGIMAIMVNSNPETVSTDYDTSDRLYFEPLTFEDVMNIVEKEKPEGVIVQFGGQTPLNL 679

Query: 735  SLPIHQYLDEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKS 794
            ++P+ +               V I GTSPD+ID AEDRERF A+I++L + QP  G A  
Sbjct: 680  AVPLMR-------------AGVPILGTSPDAIDRAEDRERFQALIEKLGLLQPPNGTAMD 726

Query: 795  EADALAIAKEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLS 854
               AL +A+ I YPVVVRPSYVLGGRAM +VY  E LV Y    V   PE P+LIDK+L 
Sbjct: 727  LDQALEVAERITYPVVVRPSYVLGGRAMAVVYDKEELVDYFREQVPEKPEHPILIDKFLE 786

Query: 855  DAIEIDVDALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKL 914
             A+E+DVDAL+D    V + GIMEHIE+AG+HSGDSAC++P+ ++S   +  I++    L
Sbjct: 787  HAVEVDVDALSDG-KEVYVAGIMEHIEEAGIHSGDSACVLPSFSLSYDHVALIAAQAEAL 845

Query: 915  AKRLNVCGLMNCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLN 974
            A+ L V GLMN Q+AI    D+Y+LE NPRASRT PFVSKA G PL   A  VM GK+L+
Sbjct: 846  ARELKVVGLMNIQFAIKGD-DLYILEVNPRASRTAPFVSKATGVPLPYMATQVMLGKTLD 904

Query: 975  DL--------GFTKEVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIA 1026
            +L        GFT         VKEAVLPF++F G D++LGPEM STGEVMG+   FP A
Sbjct: 905  ELDPWSMRRGGFT--------CVKEAVLPFQRFPGVDIILGPEMHSTGEVMGMGSDFPEA 956

Query: 1027 FAKAQIAAGQKLPLSGTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIA 1086
            + K+Q+A+GQ LP  G VF+S+ND  KP L  +A  F D+GF +++T GTA +L  +G+ 
Sbjct: 957  YYKSQLASGQDLPQGGNVFISVNDRDKPILPEVAAMFADLGFHLLATRGTARYLRERGLE 1016

Query: 1087 VERVLKMHEGRPHAGDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSG 1146
            VE VLK++EGRP+  D + NG + +++ T+SG +  + D   +R   ++Y VP  TTV+G
Sbjct: 1017 VEEVLKVYEGRPNIVDRMINGDVALVINTASGKNTAR-DSKSIRHTAVSYGVPYCTTVAG 1075

Query: 1147 ALANAEAIRSLKSNTVTMTALQDFFDVE 1174
            A A+A AI   + +T  + +LQ+++  E
Sbjct: 1076 AKASAIAIGKRREDT-HVESLQEYYARE 1102



 Score =  195 bits (496), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 134/461 (29%), Positives = 222/461 (48%), Gaps = 31/461 (6%)

Query: 620  EFEANTPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYE 679
            E +  TP ++ +         T   K+L++G GP  IGQG EFDY       +L+  GYE
Sbjct: 9    EGQGRTPAIFPTIQEHPMPKRTDLHKILVIGAGPIVIGQGCEFDYSGSQAVKALKEEGYE 68

Query: 680  TIMMNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIH 739
             +++NSNP T+ TD   +D  Y EP+  + +  +I  ERP+ ++   GGQT L  +L + 
Sbjct: 69   VVLVNSNPATIMTDPHMADATYIEPIEQQTLAAIIRKERPDALLPTLGGQTALNAALGLA 128

Query: 740  QYLDEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADAL 799
            +            +  V + G   + I+ AE RE F   ++ + ++ P  GIA +  +  
Sbjct: 129  K-------SGVLAECGVELIGARAEVIEKAESRELFRQAMENIGLKVPASGIAHNMDEVR 181

Query: 800  AIAKEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEI 859
            A+   + +P+++RP++ LGG    I Y    L     + +   P   V+I++ +    E 
Sbjct: 182  ALGDVLPFPLIIRPAFTLGGTGGGIAYNMADLEEVAGHGLSASPVSEVMIEQSVLGWKEF 241

Query: 860  DVDALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLN 919
            +++ + D   N VI   +E+++  GVH+GDS  + P +T++ +    +   +  + + + 
Sbjct: 242  EMEVMRDKNDNCVIVCSIENVDAMGVHTGDSITVAPAQTLTDAEYQMMRDASFAIMREIG 301

Query: 920  V-CGLMNCQYAIT-TSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDL- 976
            V  G  N Q+ I   +G++ ++E NPR SR+    SKA G P+AK AA +  G +L++L 
Sbjct: 302  VETGGSNVQFGINPDNGEMVVIEMNPRVSRSSALASKATGFPIAKLAAKLAIGYTLDELR 361

Query: 977  -GFTKEVIPK------HVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAK 1029
               T+E          +  VK     FEKF G    L   M+S GE M I  +F  A  K
Sbjct: 362  NDITRETAASFEPAIDYCVVKIPRFTFEKFPGAKDELTTSMKSVGEAMSIGRTFKEALQK 421

Query: 1030 A----QIAAG-------QKLPLSGTVFLSLNDLTKPHLERI 1059
                 +I A        ++LP    +   L    KPH  RI
Sbjct: 422  GLRSMEIGASGLGFNFRRELPPLPEIMAGLR---KPHSRRI 459


>gi|357032567|ref|ZP_09094502.1| carbamoyl phosphate synthase large subunit [Gluconobacter morbifer
            G707]
 gi|356413558|gb|EHH67210.1| carbamoyl phosphate synthase large subunit [Gluconobacter morbifer
            G707]
          Length = 1084

 Score = 1235 bits (3196), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 624/1106 (56%), Positives = 802/1106 (72%), Gaps = 44/1106 (3%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILI+GAGPIVIGQACEFDYSG QACKAL+EEGY VILINSNPATIMTDPGLAD
Sbjct: 3    KRTDIKSILIIGAGPIVIGQACEFDYSGAQACKALREEGYRVILINSNPATIMTDPGLAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+TPE VE+++ KE+PDA+LPTMGGQTALN A+AL +SG L+K+GVELIGA  + 
Sbjct: 63   ATYIEPITPEFVERIILKEKPDAVLPTMGGQTALNAAMALDKSGFLKKHGVELIGADAEV 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I +AEDR  F++AM  IG+++P S I +TL+E      E+G  P IIRP+FT+GG GGGI
Sbjct: 123  IDRAEDRQKFREAMDEIGIESPRSAIAHTLEEARKALKEVG-LPTIIRPSFTMGGAGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEF+ I   GL AS T++VL+E+S+LGWKEYE+EV+RD ADN +IICSIEN+DPMG
Sbjct: 182  AYNREEFDQIVLGGLDASPTTEVLIEESVLGWKEYEMEVVRDRADNCIIICSIENIDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPA TLTDKEYQR+RD S+A +R+IGVE GGSNVQF VNP DG ++VIEMN
Sbjct: 242  VHTGDSITVAPALTLTDKEYQRMRDASLACLRKIGVETGGSNVQFGVNPADGRMVVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRF 447
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDITK TPASFEP+IDYVV KIPRF
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGYTLDELKNDITKTTPASFEPTIDYVVAKIPRF 361

Query: 448  AFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDWE 507
             FEKFPGS  LL+T MKSVGEAM++GR+F E+ QK  RS+E G  G    +  E   D  
Sbjct: 362  TFEKFPGSPALLSTSMKSVGEAMSVGRSFAEAIQKGFRSMETGLMGL---DPVEAPGDGS 418

Query: 508  QLKY--SLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELI----DVEQFL 561
            +  Y  +L  P P+R+     A++ G+ V+E+ +    + WFL Q + +I    DVE+  
Sbjct: 419  KDAYLAALAEPRPERILMAAQALRAGLTVEEVQQACKFEPWFLRQLEGIIASERDVEKNG 478

Query: 562  LTQSVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEF 621
            L + V       F  +K +GFSD Q+A+ +  +  +V  +R +L V+P Y+ +DTCAAEF
Sbjct: 479  LPKDVYG-----FRRLKAQGFSDAQLAYLSGQSVPDVATQREALNVVPVYRHIDTCAAEF 533

Query: 622  EANTPYMYSSYDF-----ECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSA 676
             ++TPY+YS+Y+      ECES PT + K++ILGGGPNRIGQGIEFDYCC H +++L+ A
Sbjct: 534  ASDTPYLYSTYEGGFSTPECESQPTGRDKIIILGGGPNRIGQGIEFDYCCVHAAYALREA 593

Query: 677  GYETIMMNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLE----RPEGIIVQFGGQTPL 732
            G+ET+M+N NPETVSTDYDTSDRLYFEPLT EDV+ +I  E    R  G IVQ+GGQTPL
Sbjct: 594  GFETVMVNCNPETVSTDYDTSDRLYFEPLTAEDVIALIRTEAKGGRILGCIVQYGGQTPL 653

Query: 733  KLSLPIHQYLDEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIA 792
            KLS  +              D  + + GT  D+ID AEDRERF A++++L + QP+ GIA
Sbjct: 654  KLSRALE-------------DAGIPLLGTPADAIDRAEDRERFQAMLRKLGLRQPRNGIA 700

Query: 793  KSEADALAIAKEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEV-DPE---RPVL 848
            ++ A+A  +A+++GYPVV RPSYVLGGRAMEIVY    L  YL + + V  PE    PVL
Sbjct: 701  RTPAEAEKVAEDVGYPVVARPSYVLGGRAMEIVYDRPGLKRYLNDVLRVAGPEVSTGPVL 760

Query: 849  IDKYLSDAIEIDVDALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTIS 908
            +D YL+DAIE DVD +AD    V + G+MEHIE+AG+HSGDSAC +P  T+S + +  + 
Sbjct: 761  LDHYLNDAIEADVDCIADG-ETVYVAGVMEHIEEAGIHSGDSACSLPPYTLSPALVTELR 819

Query: 909  SWTIKLAKRLNVCGLMNCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVM 968
            S T  +A+ L + GLMN QYAI    +V++LE NPRASRTVPFV+KA G P+AK  A VM
Sbjct: 820  SQTEAMARELGIRGLMNVQYAIKDQ-EVFVLEVNPRASRTVPFVAKATGVPVAKIGARVM 878

Query: 969  SGKSLNDLGFTKEVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFA 1028
            +G  L++       +  HV+VKEAV PF +F   D +LGPEMRSTGEVMG+D SF  AFA
Sbjct: 879  AGARLSEFRLDGGAVSPHVAVKEAVFPFHRFANADTILGPEMRSTGEVMGLDSSFERAFA 938

Query: 1029 KAQIAAGQKLPLSGTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVE 1088
            K+Q+AAG KLPLSG VFLS+ +  K H++ IA+  +++GF I++T+GTA  LE   I V+
Sbjct: 939  KSQLAAGVKLPLSGAVFLSVRNSDKAHVQSIARKLVEMGFTILATAGTADRLEEANIPVQ 998

Query: 1089 RVLKMHEGRPHAGDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGAL 1148
            RV K+ +GRP+  D + +G +QM++ TS G    + D   +RR  L   +P  TT++GA 
Sbjct: 999  RVNKVMQGRPNCVDAIRSGDVQMVINTSQGGQAAR-DSYDIRRSALTMGIPHYTTIAGAR 1057

Query: 1149 ANAEAIRSLKSNTVTMTALQDFFDVE 1174
            A   AI  LK   + +  LQ +F  E
Sbjct: 1058 AATYAIAVLKEGNLGVAPLQSYFKGE 1083


>gi|407687188|ref|YP_006802361.1| carbamoyl phosphate synthase large subunit [Alteromonas macleodii
            str. 'Balearic Sea AD45']
 gi|407290568|gb|AFT94880.1| carbamoyl phosphate synthase large subunit [Alteromonas macleodii
            str. 'Balearic Sea AD45']
          Length = 1073

 Score = 1235 bits (3195), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 623/1076 (57%), Positives = 785/1076 (72%), Gaps = 18/1076 (1%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILI+GAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIQSILIIGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  E+V +++EKERPDA+LPTMGGQTALN A+ L + G LE++G ELIGA  DA
Sbjct: 63   ATYIEPIHWEVVRKIIEKERPDAILPTMGGQTALNCALELDKHGVLEEFGCELIGATADA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAE+R+ F +AMK IG++ P + I +++DE   + + IG FP IIRP+FT+GGTGGGI
Sbjct: 123  IDKAENRERFDKAMKNIGLECPRAEIAHSMDEAHDVLSRIG-FPCIIRPSFTMGGTGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN +EF  IC  GL  S T+++L+++SLLGWKEYE+EV+RD ADN +I+C+IEN DPMG
Sbjct: 182  AYNIDEFNEICHRGLDLSPTNELLIDESLLGWKEYEMEVVRDKADNCIIVCTIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKE+Q +R+ ++A++REIGVE GGSNVQF V+P  G +++IEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEFQLMRNAAMAVLREIGVETGGSNVQFGVDPKTGRMVIIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKK-TPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT   TPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGYTLDELANDITGGLTPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            F FEKF G+   LTTQMKSVGE MA+GR  QES QKALR LE G +G       E     
Sbjct: 362  FNFEKFAGANDRLTTQMKSVGEVMAIGRNQQESLQKALRGLEVGATGLNPMVDLEDPESR 421

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
             ++ Y LR P  +R+  I  A + GM V+E+ +L+ ID+W+L Q +ELI +E  +    +
Sbjct: 422  NKVVYELRQPGAERIWYIGDAFRMGMTVEEVFDLTNIDRWYLVQLEELILIEAKVAELGL 481

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
             ++  D    +KR+GFSD ++A  TK  E ++RE R   G+ P YKRVDTCAAEF  +T 
Sbjct: 482  PSIDADFMRALKRKGFSDARLAELTKVAESDIRETRRDFGISPVYKRVDTCAAEFSTSTA 541

Query: 627  YMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSN 686
            YMYS+YD ECE+APT K K+++LGGGPNRIGQGIEFDYCC H + S++  GYETIM+N N
Sbjct: 542  YMYSTYDEECEAAPTDKDKIMVLGGGPNRIGQGIEFDYCCVHAALSMREDGYETIMVNCN 601

Query: 687  PETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHR 746
            PETVSTDYDTSDRLYFEP+T+EDVL ++  E+P+G+IVQ+GGQTPLKL+          R
Sbjct: 602  PETVSTDYDTSDRLYFEPVTLEDVLEIVAKEQPKGVIVQYGGQTPLKLA----------R 651

Query: 747  LPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEIG 806
               A+G   V + GTSP++ID AEDRERF  ++ +L+++QP      +   AL +A+EIG
Sbjct: 652  ALEAAG---VPVIGTSPEAIDRAEDRERFQQMVNKLNLKQPANATVTNVEQALTMAEEIG 708

Query: 807  YPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALAD 866
            +P+VVRPSYVLGGRAMEIVY  + L  YL  AV+V  + PVL+D++L DAIE+D+DA+ D
Sbjct: 709  FPLVVRPSYVLGGRAMEIVYDLKDLKRYLNEAVKVSNDAPVLLDRFLDDAIEVDIDAICD 768

Query: 867  SCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNC 926
               +VVIGGIMEHIEQAGVHSGDSAC +P  ++S    D +      +A  L V GLMN 
Sbjct: 769  G-KDVVIGGIMEHIEQAGVHSGDSACSLPPHSLSKEIQDVMREQVKAMALELGVVGLMNT 827

Query: 927  QYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPKH 986
            Q+AI   G+VYL+E NPRA+RTVPFVSKA G PLAK AA VM+G SL + G T+EVIP  
Sbjct: 828  QFAI-KDGEVYLIEVNPRAARTVPFVSKATGVPLAKVAARVMAGVSLAEQGVTEEVIPPF 886

Query: 987  VSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVFL 1046
             SVKE VLPF KFQG D LLGPEMRSTGEVMG+  +F  A+AKA + AG  LP  G   +
Sbjct: 887  YSVKEVVLPFAKFQGVDPLLGPEMRSTGEVMGVGDTFEEAYAKANLGAGAPLPKQGKALI 946

Query: 1047 SLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVAN 1106
            S+ D  KP +  +AKA ++ GF I +T GTA  L   GI    V KM EGRP+  D + N
Sbjct: 947  SVRDNDKPRMIALAKALVEAGFSIEATRGTATELYDAGIMSTVVNKMSEGRPNIVDAIKN 1006

Query: 1107 GQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTV 1162
            G+   ++ T+ G      D + +RR  L  KV   TT++ A A   A  +   N V
Sbjct: 1007 GEYAYLINTTEGRQA-ITDSVYIRREALLNKVTYTTTMNAAFATIRAKSADDRNKV 1061


>gi|298292331|ref|YP_003694270.1| carbamoyl-phosphate synthase large subunit [Starkeya novella DSM 506]
 gi|296928842|gb|ADH89651.1| carbamoyl-phosphate synthase, large subunit [Starkeya novella DSM
            506]
          Length = 1111

 Score = 1235 bits (3195), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 632/1124 (56%), Positives = 802/1124 (71%), Gaps = 58/1124 (5%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD+  ILI+GAGPIVIGQACEFDYSGTQACK LK EGY V+L+NSNPATIMTDP LAD
Sbjct: 3    KRTDISTILIIGAGPIVIGQACEFDYSGTQACKTLKAEGYRVVLVNSNPATIMTDPDLAD 62

Query: 148  RTYITPMTPELVEQVLEKERPD-----ALLPTMGGQTALNLAVALAESGALEKYGVELIG 202
             TYI P+TPE+V +++ KER       ALLPTMGGQTALN A++L + G L++Y VE+IG
Sbjct: 63   ATYIEPITPEIVAKIIAKERHAVPGGFALLPTMGGQTALNCALSLRKMGVLDEYDVEMIG 122

Query: 203  AKLDAIKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGG 262
            A  +AI KAEDR+LF+ AM  IG+ TP S    TL + +   +E+G  P IIRP+FT+GG
Sbjct: 123  ATAEAIDKAEDRELFRDAMTKIGLDTPRSRQIKTLPQALEALDEVG-LPAIIRPSFTMGG 181

Query: 263  TGGGIAYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIEN 322
             GGGIAYNK E+  I + G+ AS T++VLVE+S+LGWKEYE+EV+RD ADN +IICSIEN
Sbjct: 182  LGGGIAYNKSEYIEIIERGIDASPTNEVLVEESVLGWKEYEMEVVRDKADNCIIICSIEN 241

Query: 323  VDPMGVHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVM 382
            VDPMGVHTGDSITVAPA TLTDKEYQR+RD S+A++REIGVE GGSNVQFA++P  G ++
Sbjct: 242  VDPMGVHTGDSITVAPALTLTDKEYQRMRDASLAVLREIGVETGGSNVQFAIDPETGRMI 301

Query: 383  VIEMNPRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVV 441
            VIEMNPRVSRSSALASKATGFPIAK+AA+L+VGY+LD+I NDIT   TPASFEP+IDYVV
Sbjct: 302  VIEMNPRVSRSSALASKATGFPIAKVAARLAVGYTLDEIANDITGGATPASFEPTIDYVV 361

Query: 442  TKIPRFAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKE 501
            TKIPRFAFEKFPG+EP+LTT MKSVGEAMA+GRTFQES QKALRSLE G +G     ++ 
Sbjct: 362  TKIPRFAFEKFPGAEPILTTSMKSVGEAMAIGRTFQESLQKALRSLETGLTGLDEIEIEG 421

Query: 502  LDW--DWEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQ 559
            L    D   ++ +L  P PDR+  +  AM+ G+  + IH    ID WFL Q +E++D+E 
Sbjct: 422  LGLHDDKNAIRAALGTPTPDRLLKVAQAMRLGLDNETIHAACKIDPWFLEQIREIVDMEA 481

Query: 560  FLLTQSVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAA 619
             +    +   T   F  +K  GFSD ++A   + +E EV ++R  L V P YKR+DTCAA
Sbjct: 482  KVRAHGLPR-TAGAFRRLKSMGFSDSRLAGLARMSEAEVSKRRRELSVRPVYKRIDTCAA 540

Query: 620  EFEANTPYMYSSY------DFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSL 673
            EF A T YMYSSY      +   E+ P+  +KV ILGGGPNRIGQGIEFDYCCCH +F+L
Sbjct: 541  EFAAPTAYMYSSYETPFAGELMDEARPSNARKVAILGGGPNRIGQGIEFDYCCCHAAFAL 600

Query: 674  QSAGYETIMMNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERP----EGIIVQFGGQ 729
            + AGYETIM+N NPETVSTDYDTSDRLYFEPLT EDV+ ++D ER      G+IVQFGGQ
Sbjct: 601  KDAGYETIMVNCNPETVSTDYDTSDRLYFEPLTAEDVIEILDRERSNGTLHGVIVQFGGQ 660

Query: 730  TPLKLSLPIHQYLDEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKG 789
            TPLKL+    + L++  +P         I GTSP++ID AEDR+RF  ++ +L + QP  
Sbjct: 661  TPLKLA----RALEDADIP---------ILGTSPEAIDLAEDRDRFKTLLDKLKLRQPAN 707

Query: 790  GIAKSEADALAIAKEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAV-EVDP----- 843
            GIA S   A  +  ++GYP+VVRPSYVLGGRAM+I++ +  L  YL   + E+ P     
Sbjct: 708  GIAYSVEQARLVTADLGYPLVVRPSYVLGGRAMQIIHEESQLGDYLLGTLPELVPNDIKA 767

Query: 844  ---------------ERPVLIDKYLSDAIEIDVDALADSCGNVVIGGIMEHIEQAGVHSG 888
                           + P+L D+YLSDAIE+DVD LAD   +  + GIMEHIE+AG+HSG
Sbjct: 768  RYPNDKTGQINTLLGKNPLLFDRYLSDAIEVDVDCLADG-KDTFVCGIMEHIEEAGIHSG 826

Query: 889  DSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNCQYAITTSGDVYLLEANPRASRT 948
            DSAC +P  ++    +  + + T K+A  L V GLMN QYAI   G +++LE NPRASRT
Sbjct: 827  DSACSLPPYSLGPEMIAELENQTRKMALALEVGGLMNVQYAI-KDGVIHVLEVNPRASRT 885

Query: 949  VPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPKHVSVKEAVLPFEKFQGCDVLLGP 1008
            VPFV+K +G P+AK AA +M+G+SL   G T      HV+VKEAV PF +F G D +LGP
Sbjct: 886  VPFVAKVVGQPIAKIAARIMAGESLASFGLTP-FAADHVAVKEAVFPFARFPGVDTVLGP 944

Query: 1009 EMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVFLSLNDLTKPHLERIAKAFLDIGF 1068
            EMRSTGEVMG+D SFPIAFAK+Q+  G K+P SGTVF+SL D  KP +   A+  + +GF
Sbjct: 945  EMRSTGEVMGLDASFPIAFAKSQLGGGTKVPTSGTVFISLRDDDKPRILDAARLLIALGF 1004

Query: 1069 KIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVANGQIQMMVITSSGDSLDQIDGLK 1128
            K+++TSGT  FL   G+   ++ K+ EGRPH  D + NG++Q++  T+ G +    D   
Sbjct: 1005 KVIATSGTQRFLAENGVPSAKINKVLEGRPHIVDAIKNGEVQLVFNTTEG-AQALADSRS 1063

Query: 1129 LRRRGLAYKVPVITTVSGALANAEAIRSLKSNTVTMTALQDFFD 1172
            LRR  L +KVP  TT+SGA+A A  I++     + + ALQD+F+
Sbjct: 1064 LRRAALLHKVPYYTTLSGAIAAARGIKAYIGGDLEVRALQDYFN 1107


>gi|338998865|ref|ZP_08637526.1| carbamoyl phosphate synthase, large subunit [Halomonas sp. TD01]
 gi|338764247|gb|EGP19218.1| carbamoyl phosphate synthase, large subunit [Halomonas sp. TD01]
          Length = 1076

 Score = 1235 bits (3195), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 622/1087 (57%), Positives = 794/1087 (73%), Gaps = 23/1087 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD+  ILI+GAGPIVIGQACEFDYSG QACKAL+EEG+ VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDINSILIIGAGPIVIGQACEFDYSGAQACKALREEGFRVILVNSNPATIMTDPAMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+T + VE+++E ERPDA+LPTMGGQTALN A+ L + G LEKYGVE+IGA  DA
Sbjct: 63   ATYIEPITWQAVEKIIEVERPDAILPTMGGQTALNCALDLEKHGVLEKYGVEMIGANADA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I  AEDRDLF QAMK IG++ P + + +T+DE   I  E+G FP IIRP++T+GG+GGG+
Sbjct: 123  INMAEDRDLFDQAMKRIGLECPKAKVAHTMDEAWEIQAELG-FPTIIRPSYTMGGSGGGV 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYNKEEFE IC  G   S   ++L+++SLLGWKEYE+EV+RD  DN +I+C+IEN DPMG
Sbjct: 182  AYNKEEFEEICTRGFELSNNHELLIDESLLGWKEYEMEVVRDKNDNCIIVCAIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ +RD S+A++REIGVE GGSNVQF ++P  G ++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQIMRDASLAVLREIGVETGGSNVQFGMDPKTGRLVVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT  +TPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKIAAKLAVGYTLDELQNDITGGRTPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            F FEKFP +   LTTQMKSVGE MA+GRTFQES QKALR LE G  G           + 
Sbjct: 362  FTFEKFPQANDRLTTQMKSVGEVMAIGRTFQESLQKALRGLETGNDGLDPIITDFTPDNM 421

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
              ++  L+    +R+  +  AM+ GM VDE+  L+ ID WFL Q ++L+  E  +  +++
Sbjct: 422  AIIQGELQAAGAERIFYVADAMRSGMSVDEVFALTNIDPWFLVQLEDLVLTENAVAKRAL 481

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
            ++ +  + Y++KR+GF D ++A     +EKE R+ R + G+ P YKRVDTCAAEF ++T 
Sbjct: 482  ADFSARELYQLKRKGFGDARLAKLLGVSEKEFRKTRQAAGIRPVYKRVDTCAAEFASDTA 541

Query: 627  YMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSN 686
            YMYS+Y+ ECE+  + ++K+++LGGGPNRIGQGIEFDYCC H +F+++  GYETIM+N N
Sbjct: 542  YMYSTYEEECEADVSDRQKIMVLGGGPNRIGQGIEFDYCCVHAAFAMRDDGYETIMVNCN 601

Query: 687  PETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHR 746
            PETVSTDYDTSDRLYFEP+T+EDVL + D E+P G+IVQFGGQTPLKL+          R
Sbjct: 602  PETVSTDYDTSDRLYFEPVTLEDVLEIADKEKPVGVIVQFGGQTPLKLA----------R 651

Query: 747  LPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEIG 806
               A+G   V I GT+PD+ID AEDRERF  +I +L ++QP    A+S  +A + A+ IG
Sbjct: 652  ELEAAG---VPIIGTTPDAIDRAEDRERFQVMIDKLGLKQPPNATARSFEEAFSKAEAIG 708

Query: 807  YPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALAD 866
            YP+VVRPSYVLGGRAMEIVY    L  Y+ NAV+V  + PVL+D +LS AIEID+DA++D
Sbjct: 709  YPLVVRPSYVLGGRAMEIVYDASELENYMTNAVKVSNDSPVLLDHFLSAAIEIDIDAVSD 768

Query: 867  SCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNC 926
                VVIGGIM+H+EQAGVHSGDSAC +P  ++ +   D +     K+A  L V GLMN 
Sbjct: 769  G-QQVVIGGIMQHVEQAGVHSGDSACALPPYSLPADVQDEMREQVKKMAVELGVKGLMNV 827

Query: 927  QYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPKH 986
            Q A    G++Y++E NPRASRTVPFVSK IG  LA+ AA  M+GK+L + GF +E+IP  
Sbjct: 828  QLA-WQDGEIYVIEVNPRASRTVPFVSKCIGTSLAQIAARCMAGKTLAEQGFEREIIPHF 886

Query: 987  VSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLP-LSG--T 1043
             SVKEAV PF KFQG D +L PEM+STGEVMG   +F  AF KAQ+ AG+ +P LSG   
Sbjct: 887  YSVKEAVFPFNKFQGVDPILSPEMKSTGEVMGSGETFAEAFFKAQLGAGEAIPALSGDRK 946

Query: 1044 VFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDM 1103
             FLS+ +  K  +  +A++ L +GF + +T GTA  LE  G+ VE V K++EGRPH  D+
Sbjct: 947  AFLSVREPDKQGIIEVARSLLTLGFTLCATRGTAEALEAAGLEVEHVNKVYEGRPHIVDL 1006

Query: 1104 VANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTVT 1163
            + N +I  +V T+ G      D   +RR  LA KVP  TT++G  ANA  +       +T
Sbjct: 1007 LKNDEIAYIVNTTEGRQAIN-DSSIIRRTALARKVPYATTLAG--ANAVCMALEYGREIT 1063

Query: 1164 MTALQDF 1170
            +  LQD 
Sbjct: 1064 VRRLQDL 1070


>gi|453330377|dbj|GAC87605.1| carbamoyl phosphate synthase large subunit [Gluconobacter
            thailandicus NBRC 3255]
          Length = 1084

 Score = 1235 bits (3195), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 626/1108 (56%), Positives = 805/1108 (72%), Gaps = 48/1108 (4%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD+  ILI+GAGPIVIGQACEFDYSG QACKAL+EEGY VILINSNPATIMTDPGLAD
Sbjct: 3    KRTDITSILIIGAGPIVIGQACEFDYSGAQACKALREEGYRVILINSNPATIMTDPGLAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+TPE VE+++ KE+PDA+LPTMGGQTALN A+AL +SG L+K+ VELIGA  + 
Sbjct: 63   ATYIEPITPEFVERIILKEKPDAVLPTMGGQTALNAAMALDKSGFLKKHNVELIGADAEV 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I +AEDR  F++AM  IG+++P S I +TL E  +   ++G  P IIRP+FT+GG GGGI
Sbjct: 123  IDRAEDRQKFREAMDEIGIESPRSTIAHTLAEARAALADVG-LPAIIRPSFTMGGAGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEF+ I   GL AS T++VL+E+S+LGWKEYE+EV+RD ADN +IICSIEN+DPMG
Sbjct: 182  AYNREEFDQIVTGGLDASPTTEVLIEESVLGWKEYEMEVVRDTADNCIIICSIENIDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPA TLTDKEYQR+RD S+A +R+IGVE GGSNVQF VNP DG ++VIEMN
Sbjct: 242  VHTGDSITVAPALTLTDKEYQRMRDASLACLRKIGVETGGSNVQFGVNPADGRMVVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRF 447
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDITK TPASFEP+IDYVV KIPRF
Sbjct: 302  PRVSRSSALASKATGFPIAKIAAKLAVGYTLDELKNDITKTTPASFEPTIDYVVAKIPRF 361

Query: 448  AFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDWE 507
             FEKFPGS  LL+T MKSVGEAM++GR+F E+ QK  RS+E G +G    +  E   D  
Sbjct: 362  TFEKFPGSPALLSTSMKSVGEAMSVGRSFAEAIQKGFRSMETGLTGL---DPVEAPGDGS 418

Query: 508  QLKY--SLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELI----DVEQFL 561
            +  Y  +L  P P+R+     A++ G+ V+E+ +    + WFL Q +++I    DVE+  
Sbjct: 419  KDAYLAALAEPRPERILMAAQALRAGLTVEEVQQACKFEPWFLRQLEDIIASERDVEK-- 476

Query: 562  LTQSVSNMTKD--DFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAA 619
                 + + KD   F  +K +GFSD Q+A  +  +  +V  +R +L V+P Y+R+DTCAA
Sbjct: 477  -----NGLPKDAYGFRRLKAQGFSDAQLARLSGQSAPDVAAQREALNVVPVYRRIDTCAA 531

Query: 620  EFEANTPYMYSSYDF-----ECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQ 674
            EF ++TPY+YS+Y+      ECES PT + K++ILGGGPNRIGQGIEFDYCC H +++L+
Sbjct: 532  EFASDTPYLYSTYEGGFGTPECESKPTSRDKIIILGGGPNRIGQGIEFDYCCVHAAYALR 591

Query: 675  SAGYETIMMNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLE----RPEGIIVQFGGQT 730
             AG+ET+M+N NPETVSTDYDTSDRLYFEPLT EDV+ +I  E    +  G IVQ+GGQT
Sbjct: 592  EAGFETVMVNCNPETVSTDYDTSDRLYFEPLTAEDVIALIRTEARGGKILGCIVQYGGQT 651

Query: 731  PLKLSLPIHQYLDEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGG 790
            PLKLS    + L+E  +P         + GT  D+ID AEDRERF  ++++L + QP+ G
Sbjct: 652  PLKLS----RALEEAGIP---------LLGTPADAIDRAEDRERFQTMLRKLGLRQPRNG 698

Query: 791  IAKSEADALAIAKEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVE-VDPE---RP 846
            IA++ ADA  +A+E+GYPVV RPSYVLGGRAMEIVY +  L  YL   +    PE    P
Sbjct: 699  IARTPADAEKVAEEVGYPVVARPSYVLGGRAMEIVYDNAGLKHYLNTVLRAAGPEVSTGP 758

Query: 847  VLIDKYLSDAIEIDVDALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDT 906
            +L+D YL+DAIE DVD +AD    V + G+MEHIE+AG+HSGDSAC +P  T+S + +  
Sbjct: 759  ILLDHYLNDAIEADVDCIADG-ETVYVAGVMEHIEEAGIHSGDSACSLPPYTLSPALVTE 817

Query: 907  ISSWTIKLAKRLNVCGLMNCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAAL 966
            + S T  +A+ L + GLMN QYAI    +V++LE NPRASRTVPFV+KA G P+AK  A 
Sbjct: 818  LRSQTEAMARELGIRGLMNVQYAIKDQ-EVFVLEVNPRASRTVPFVAKATGVPVAKIGAR 876

Query: 967  VMSGKSLNDLGFTKEVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIA 1026
            VM+G  L++       +  HV+VKEAV PF +F   D +LGPEMRSTGEVMG+D SF  A
Sbjct: 877  VMAGARLSEFRLDGGAVSPHVAVKEAVFPFHRFANADTILGPEMRSTGEVMGLDSSFERA 936

Query: 1027 FAKAQIAAGQKLPLSGTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIA 1086
            FAK+Q+AAG KLPLSGTVFLS+ D  K H++ +A+  +++GF I++TSGTA  LE   I 
Sbjct: 937  FAKSQLAAGVKLPLSGTVFLSVRDSDKGHVQPLARKLVEMGFTILATSGTASRLEAANIP 996

Query: 1087 VERVLKMHEGRPHAGDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSG 1146
            V+RV K+ +GRP+  D + +G +QM++ TS G    + D   +RR  L   VP  TT++G
Sbjct: 997  VKRVNKVMQGRPNCVDAIRSGDVQMVINTSQGGQAAR-DSYDIRRGALTMGVPHYTTIAG 1055

Query: 1147 ALANAEAIRSLKSNTVTMTALQDFFDVE 1174
            A A   AI  LK   + +  LQ +F  E
Sbjct: 1056 ARAATYAIAVLKEGDLGVAPLQSYFKGE 1083


>gi|83859440|ref|ZP_00952961.1| carbamoyl-phosphate synthase large subunit [Oceanicaulis sp.
            HTCC2633]
 gi|83852887|gb|EAP90740.1| carbamoyl-phosphate synthase large subunit [Oceanicaulis alexandrii
            HTCC2633]
          Length = 1086

 Score = 1234 bits (3194), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 628/1096 (57%), Positives = 791/1096 (72%), Gaps = 32/1096 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILI+GAGPIVIGQACEFDYSG QA KALKEEGY VIL+NSNPATIMTDP LAD
Sbjct: 3    KRTDIQSILIIGAGPIVIGQACEFDYSGVQAVKALKEEGYRVILVNSNPATIMTDPDLAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TY+ P+TPE+V +V+EKERPDALLPTMGGQTALN A+ L + G L+ + VE+IGAK D 
Sbjct: 63   ATYVEPITPEMVAKVIEKERPDALLPTMGGQTALNCALELDKRGVLDLFNVEMIGAKADV 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAE+R+ F+ AM +IG+++P S   +T+ E   +  E+G  P +IRP+FT+GGTGGGI
Sbjct: 123  IDKAENRERFRNAMDSIGLESPKSRTVHTMAEAEVVLEELG-LPAVIRPSFTMGGTGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN EEF  I  +GL  S  ++VL+E+S+LGWKEYE+EV+RD ADN +IICSIEN+DPMG
Sbjct: 182  AYNVEEFREIVTSGLYNSPVTEVLIEESVLGWKEYEMEVVRDKADNCIIICSIENIDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPA TLTDKEYQR+R  SIA++REIGVE GGSNVQFAVNP DG ++VIEMN
Sbjct: 242  VHTGDSITVAPALTLTDKEYQRMRSASIAVLREIGVETGGSNVQFAVNPADGRMVVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD+I NDIT   TPASFEP+IDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGYTLDEIDNDITGGATPASFEPTIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            FAFEK+PG++  LTT MKSVGEAMA+GR+F ES QKALRSLE G SG+    ++ LD   
Sbjct: 362  FAFEKYPGAQATLTTSMKSVGEAMAMGRSFTESVQKALRSLETGLSGFDEIEIEGLDQAE 421

Query: 507  EQ------LKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQF 560
            ++      +  +L  P PDR+  I  A ++G+ V++IH     + WFL Q + LI  E  
Sbjct: 422  DEAARHQAVLAALSRPTPDRLLVIAQAFREGLSVEQIHAACSYEPWFLRQIETLIHAEDQ 481

Query: 561  LLTQSVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAE 620
            +    +     D+   +K  GFSDK++A   K  E EV+  R   GV P YKRVDTCAAE
Sbjct: 482  VRMLGLPQ-NGDELLTLKSMGFSDKRLATLAKIEETEVKALRKRFGVRPVYKRVDTCAAE 540

Query: 621  FEANTPYMYSSYDF--ECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGY 678
            F A TPYMYSSY+   ECES PT +KK +ILGGGPNRIGQGIEFDYCCCH +++    G 
Sbjct: 541  FSAPTPYMYSSYERGGECESQPTGRKKAIILGGGPNRIGQGIEFDYCCCHAAYAFAEMGI 600

Query: 679  ETIMMNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPE----GIIVQFGGQTPLKL 734
            E+IM+N NPETVSTDYDT+DRLYFEPLT EDVL +I+ E       G++VQ+GGQTPLKL
Sbjct: 601  ESIMVNCNPETVSTDYDTADRLYFEPLTAEDVLELIETEMQSGELLGVVVQYGGQTPLKL 660

Query: 735  SLPIHQYLDEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKS 794
            +            P     G V I GT+PD+ID AEDRERF A++ +L ++QP   IA  
Sbjct: 661  A------------PELEAAG-VPILGTAPDAIDLAEDRERFKALLDDLKLKQPPNAIAHD 707

Query: 795  EADALAIAKEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLS 854
            EA+A  +A+E+G+P+V+RPS+VLGGR MEIV   E+   Y+  AV V  + P+L+D+YLS
Sbjct: 708  EAEARQMAEELGFPLVLRPSHVLGGRGMEIVRDIESFSRYIREAVHVSGKAPLLLDRYLS 767

Query: 855  DAIEIDVDALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKL 914
            DA E+DVDA+ D   NV I GIMEHIE+AGVHSGDSAC +P  ++S   +  +   T  L
Sbjct: 768  DASEVDVDAVCDG-ENVWISGIMEHIEEAGVHSGDSACSLPPHSLSDQTVSELRRQTKAL 826

Query: 915  AKRLNVCGLMNCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLN 974
            AK ++V GLMN QYA+   G VYL+E NPRASRTVPFV+K IG P+AK AA VM+G  L 
Sbjct: 827  AKAIDVKGLMNVQYAV-KDGVVYLIEVNPRASRTVPFVAKTIGAPVAKIAAKVMAGAKLT 885

Query: 975  DLGFTKEVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAA 1034
            +   T  +  +H++VKEAV+PF +F G D +LGPEMRSTGEVMGID  F  AFAKA++ A
Sbjct: 886  EFD-TPSMPTRHIAVKEAVMPFSRFPGVDPILGPEMRSTGEVMGIDERFEAAFAKAELGA 944

Query: 1035 GQKLPLSGTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMH 1094
            G  LP SGTVF+SL +  K  +         +GFKI++T+GTA  LE  G+ V+R+ K+ 
Sbjct: 945  GVNLPKSGTVFISLKESDKAMMIESCHRLTSLGFKILATTGTAKTLEDSGVPVQRINKVF 1004

Query: 1095 EGRPHAGDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAI 1154
            EGRPH  D + NG++Q++  T+ G     ID   +RR  L  KVP  TT S + A  ++I
Sbjct: 1005 EGRPHIVDAIKNGEVQLVFNTTEGQR-SMIDSYSIRRTALEMKVPCYTTASASRAAVKSI 1063

Query: 1155 RSLKSNTVTMTALQDF 1170
             ++ +  +   +LQ +
Sbjct: 1064 AAIDAGQLEPRSLQSY 1079


>gi|449134986|ref|ZP_21770450.1| carbamoyl-phosphate synthase, large subunit [Rhodopirellula europaea
            6C]
 gi|448886465|gb|EMB16872.1| carbamoyl-phosphate synthase, large subunit [Rhodopirellula europaea
            6C]
          Length = 1083

 Score = 1234 bits (3194), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 629/1092 (57%), Positives = 798/1092 (73%), Gaps = 29/1092 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            +R D++KIL++G+GPIVIGQACEFDYSGTQACKAL+EEGYEV+L+NSNPATIMTDP  AD
Sbjct: 3    RRDDIKKILLIGSGPIVIGQACEFDYSGTQACKALREEGYEVVLVNSNPATIMTDPATAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+T ++VE+V+ KERPDALLPT+GGQT LN+A+ L  +G LEKYGVE+I A    
Sbjct: 63   ATYIEPLTWQMVEKVIAKERPDALLPTLGGQTGLNVAMDLDANGVLEKYGVEMIAANAKV 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAE+RD FK+AM+ IG+        +TL E      E+G  P ++RP+FT+GG+G  I
Sbjct: 123  IAKAEERDQFKKAMEKIGLDVCKGFTVHTLAEAREALAEVG-LPAVVRPSFTMGGSGSAI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYNK++F+++ + GL  S  ++VL+E+S++GWKEYE+EVMRD  DNVVIIC+IEN DPMG
Sbjct: 182  AYNKDDFDSLVQNGLDQSPVTEVLIEESIIGWKEYEMEVMRDRDDNVVIICAIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTL+DKEYQR+RD S+A+IREIGVE GGSN+QFA+ P  G ++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLSDKEYQRMRDASLAVIREIGVETGGSNIQFAIEPDTGRMIVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRF 447
            PRVSRSSALASKATGFPIAK+AAKL+VGY L ++PNDIT+KT A FEP+IDYVVTK+PRF
Sbjct: 302  PRVSRSSALASKATGFPIAKIAAKLAVGYRLWELPNDITQKTKACFEPTIDYVVTKMPRF 361

Query: 448  AFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDWE 507
            AFEKFP ++  LTTQMKSVGE M++GRTFQESFQKALR LE G  G+G S+ K+L W  E
Sbjct: 362  AFEKFPEADATLTTQMKSVGETMSIGRTFQESFQKALRGLEVGAFGFG-SDPKDL-WGTE 419

Query: 508  ------QLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFL 561
                  +++  L  P  +R+  I  A K GM   EIH L+ ID WFL   ++LI+ E  L
Sbjct: 420  DQPNRDEIRAKLSTPGSERVFYIRYAFKDGMTAAEIHSLTNIDPWFLDHLQQLIETEDNL 479

Query: 562  LT-QSVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAE 620
                 +  +  D   + KRRGFSD+QIA  T  TE +VR KRL +G+ P YK VDTCAAE
Sbjct: 480  RAIGKLDGIDADTMRDAKRRGFSDRQIATITSKTESQVRAKRLEMGIRPVYKSVDTCAAE 539

Query: 621  FEANTPYMYSSYDFECE-SAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYE 679
            FEA TPY YS+Y+ E E  A   KK+V+ILGGGPNRIGQGIEFDYCCCH SF+LQ  G E
Sbjct: 540  FEAFTPYYYSTYETETEVPAKGDKKRVVILGGGPNRIGQGIEFDYCCCHASFALQEIGIE 599

Query: 680  TIMMNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIH 739
            +IM+NSNPETVSTDYDTSD L+FEPLT+EDVLN+ D  +P+G+IVQFGGQTPL L+  + 
Sbjct: 600  SIMVNSNPETVSTDYDTSDILFFEPLTIEDVLNICDAMQPDGVIVQFGGQTPLNLARGLE 659

Query: 740  QYLDEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADAL 799
            Q               V I GTS D+ID AEDRE F+++I EL + QP  GIA++  +A 
Sbjct: 660  Q-------------AGVPIIGTSVDTIDTAEDRELFSSLIDELGLRQPPSGIARNMDEAR 706

Query: 800  AIAKEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEI 859
              AK IGYP +VRPS+VLGGRAMEI Y       Y+  A  V   +PVLID++L DA E+
Sbjct: 707  VEAKRIGYPALVRPSFVLGGRAMEICYDHSQFARYVAEAFIVADGQPVLIDRFLEDATEV 766

Query: 860  DVDALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLN 919
            DVDA++D   + VI GIMEHIE+AGVHSGDSAC IP  +++   L  I   T KLA RLN
Sbjct: 767  DVDAISDG-NDCVIMGIMEHIEEAGVHSGDSACCIPPFSLTQPVLAEIRDATRKLAARLN 825

Query: 920  VCGLMNCQYAITTSG---DVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDL 976
            V GLMN Q+A+   G    +Y+LE NPRASRTVPFV+KA G P+A  A  VM+G++L  L
Sbjct: 826  VVGLMNIQFAVKMEGTQPTLYILEVNPRASRTVPFVAKATGVPVANIATKVMAGETLQKL 885

Query: 977  GFTKEVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQ 1036
              T+E IP+HVS+KE+VLPF KF G D++LGPEMRSTGEVMG+   F IAFAK+Q+AAG 
Sbjct: 886  NVTEEPIPRHVSIKESVLPFRKFAGVDIVLGPEMRSTGEVMGVSELFSIAFAKSQLAAGT 945

Query: 1037 KLPLSGTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEG 1096
             LP SG +FLSL+   K   E + K+ +++GF++++T GTA  LE  G+AV RV K+ EG
Sbjct: 946  VLPESGKIFLSLSANHKESAESLGKSLIELGFELLATEGTAVRLEESGVAVTRVKKLSEG 1005

Query: 1097 RPHAGDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRS 1156
             P+  D + N  +Q+++ T SG      +G K+R  G+ + VP ITT++ A A   A+ +
Sbjct: 1006 HPNLIDYLKNDDVQLILNTPSGKGARTDEG-KIRAAGVQHGVPCITTLAAAEAAVRAMVA 1064

Query: 1157 LKSNTVTMTALQ 1168
            ++   + + +LQ
Sbjct: 1065 MRDTPMEVESLQ 1076


>gi|383759182|ref|YP_005438167.1| carbamoyl-phosphate synthase large subunit [Rubrivivax gelatinosus
            IL144]
 gi|381379851|dbj|BAL96668.1| carbamoyl-phosphate synthase large chain CarB [Rubrivivax gelatinosus
            IL144]
          Length = 1081

 Score = 1234 bits (3194), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 621/1094 (56%), Positives = 809/1094 (73%), Gaps = 31/1094 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD+ KILI+GAGPI+IGQACEFDYSG QACKAL+EEGY+VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIHKILIIGAGPIIIGQACEFDYSGAQACKALREEGYKVILVNSNPATIMTDPEMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+T ++VE+++ KERPDA+LPTMGGQTALN A+ L   G L KYGVE+IGA   A
Sbjct: 63   VTYIEPITWQVVEKIIAKERPDAILPTMGGQTALNCALDLHRHGVLAKYGVEMIGANEHA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECIS----IANEIGE--FPLIIRPAFTLG 261
            I+KAEDR  FK AM  IG+++  SGI ++++E ++    I +EIG   FP++IRP+FT+G
Sbjct: 123  IEKAEDRMKFKDAMTAIGLESAKSGIAHSMEEALAVQRRIQSEIGGTGFPMVIRPSFTMG 182

Query: 262  GTGGGIAYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIE 321
            GTGGGIAYN EEFE ICK GL  S T ++L+E+SL+GWKEYE+EV+RD ADN +I+CSIE
Sbjct: 183  GTGGGIAYNPEEFEEICKRGLDLSPTKELLIEESLIGWKEYEMEVVRDRADNCIIVCSIE 242

Query: 322  NVDPMGVHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEV 381
            N+DPMG+HTGDSITVAPAQTLTDKEYQ +R+ SIAI+REIGV+ GGSNVQF+VNP +G +
Sbjct: 243  NLDPMGIHTGDSITVAPAQTLTDKEYQLMRNASIAILREIGVDTGGSNVQFSVNPDNGRL 302

Query: 382  MVIEMNPRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYV 440
            +VIEMNPRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT   TPASFEPSIDYV
Sbjct: 303  IVIEMNPRVSRSSALASKATGFPIAKVAAKLAVGYTLDELRNDITGGATPASFEPSIDYV 362

Query: 441  VTKIPRFAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVK 500
            VTKIPRFAFEKFP ++P LTTQMKSVGE MA+GR+FQESFQKALR LE G  G     + 
Sbjct: 363  VTKIPRFAFEKFPAADPHLTTQMKSVGEVMAMGRSFQESFQKALRGLETGIDG-----LT 417

Query: 501  ELDWDWEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQF 560
            E   D +++   +    P+R+  +  A + GM +DE+ E + +D WFL Q ++L+  EQ 
Sbjct: 418  ERSTDRDEIVDEIGNVGPERILFLADAFRIGMTLDEVFEETAVDPWFLAQIQDLVATEQQ 477

Query: 561  LLTQS-VSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAA 619
            +  ++ ++ ++  +   +K +GFSDK++A    + +  VR +R  LGV P YKRVDTCAA
Sbjct: 478  VAARANLAALSAAELRWLKAKGFSDKRLAKLLGTNQHAVRARRHELGVRPVYKRVDTCAA 537

Query: 620  EFEANTPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYE 679
            EF   T YMYS+YD ECE+ PT KKK+++LGGGPNRIGQGIEFDYCC H + +++  GYE
Sbjct: 538  EFATQTAYMYSTYDEECEAEPTDKKKIMVLGGGPNRIGQGIEFDYCCVHAALAMREDGYE 597

Query: 680  TIMMNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIH 739
            TIM+N NPETVSTDYDTSDRLYFEP+T+EDVL ++D E+P G+IVQ+GGQTPLKL+L + 
Sbjct: 598  TIMVNCNPETVSTDYDTSDRLYFEPVTLEDVLEIVDKEKPVGVIVQYGGQTPLKLALDLE 657

Query: 740  QYLDEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADAL 799
            +               V I GT+PDSID AEDRERF  ++ EL ++QP    A++E  AL
Sbjct: 658  R-------------AGVPIIGTTPDSIDIAEDRERFQKLLHELGLKQPPNRTARTEEQAL 704

Query: 800  AIAKEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEI 859
            A+A EIGYP+VVRPSYVLGGRAMEIV+ D+ L  Y+  AV+V  + PVL+D++L DA+E+
Sbjct: 705  ALAHEIGYPLVVRPSYVLGGRAMEIVHGDKDLERYMREAVKVSDKSPVLLDRFLDDAVEV 764

Query: 860  DVDALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLN 919
            DVD +AD+ G V+IGGIMEH+E AG+HSGDSAC +P  T+S++  D +      +AK L 
Sbjct: 765  DVDCIADAAGEVLIGGIMEHVEAAGIHSGDSACSLPPYTLSAALQDEMRRQAAAMAKALG 824

Query: 920  VCGLMNCQYAITTSGD---VYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDL 976
            V GLMN Q+A+   G+   VY+LE NPRASRTVPFVSKA G PLAK AA  M+G+SL   
Sbjct: 825  VVGLMNTQFAVQGEGEDAVVYVLEVNPRASRTVPFVSKATGRPLAKIAARCMAGQSLKQQ 884

Query: 977  GFTKEVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQ 1036
            G   E++P   SVKEAV PF KF G D +LGPEMRSTGEVMG+  +F  A  K+Q+ AG 
Sbjct: 885  GIGAEIVPPFFSVKEAVFPFNKFPGVDPILGPEMRSTGEVMGVGKTFGEAMLKSQLGAGS 944

Query: 1037 KLPLSGTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEG 1096
            +LP  GTV +++ +  KP   ++A   + +G+++++T GTA  +   G+ V+ V K+ +G
Sbjct: 945  RLPEKGTVVITVKNSDKPRAVKVAAELVALGYEVLATKGTAQAIADAGVPVKLVNKVKDG 1004

Query: 1097 RPHAGDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRS 1156
            RPH  D V  G++Q++  T         D   +R   LA +V   TT++G+ A  EA++ 
Sbjct: 1005 RPHIADKVKAGEVQLVFTTVDETRTAIADSRYIRTAALANRVTYYTTMAGSEAATEALK- 1063

Query: 1157 LKSNTVTMTALQDF 1170
               + + + +LQ+ 
Sbjct: 1064 -HQDDLEVVSLQEL 1076


>gi|395005239|ref|ZP_10389131.1| carbamoyl-phosphate synthase, large subunit [Acidovorax sp. CF316]
 gi|394316819|gb|EJE53520.1| carbamoyl-phosphate synthase, large subunit [Acidovorax sp. CF316]
          Length = 1082

 Score = 1234 bits (3194), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 635/1082 (58%), Positives = 799/1082 (73%), Gaps = 32/1082 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILI+GAGPI+IGQACEFDYSG QACKAL+EEGY+VILINSNPATIMTDP  AD
Sbjct: 3    KRTDIKSILIIGAGPIIIGQACEFDYSGVQACKALREEGYKVILINSNPATIMTDPATAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+T + VE+++ KERPDA+LPTMGGQTALN A+ L   G L+KY VELIGA  +A
Sbjct: 63   VTYIEPITWQTVEKIIAKERPDAILPTMGGQTALNCALDLWHQGVLDKYKVELIGATPEA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  FK AM  IG+ +  SGI ++++E   +  ++G FP +IRP+FTLGGTGGGI
Sbjct: 123  IDKAEDRLKFKDAMTKIGLGSARSGIAHSMEEAWGVQKQVG-FPTVIRPSFTLGGTGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN EEFE ICK GL AS T+++L+E+SLLGWKEYE+EV+RD ADN +IICSIEN+DPMG
Sbjct: 182  AYNPEEFETICKRGLEASPTNELLIEESLLGWKEYEMEVVRDKADNCIIICSIENLDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGV+ GGSNVQF++NP DG ++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQIMRNASLAVLREIGVDTGGSNVQFSINPKDGRMVVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKK-TPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ N+IT   TPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGYTLDELRNEITGGITPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            FAFEKFP ++  LTTQMKSVGE MA+GRTFQESFQKALR LE G  G     + E   D 
Sbjct: 362  FAFEKFPTADSRLTTQMKSVGEVMAMGRTFQESFQKALRGLEVGVDG-----MNEKTQDR 416

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELI----DVEQFLL 562
            E L+  L  P P+R+  +  A   G+ VDE+ EL+ ID+WFL Q ++++    D++Q   
Sbjct: 417  EVLEKELGEPGPERIWYVGDAFAMGLSVDEVFELTKIDRWFLVQIEQIVKIELDIDQLAA 476

Query: 563  TQSVSNMTKDD---FYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAA 619
             +    +   D      +K++GFSD+++A   K+TEK VRE R +L V P YKRVDTCAA
Sbjct: 477  EKGEGALAAIDATTLRTLKQKGFSDRRLAKLLKTTEKAVREARRALNVRPVYKRVDTCAA 536

Query: 620  EFEANTPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYE 679
            EF  NT Y+YS+Y+ ECE+APT  KK+++LGGGPNRIGQGIEFDYCC H + +++  GYE
Sbjct: 537  EFATNTAYLYSTYEEECEAAPTNNKKIMVLGGGPNRIGQGIEFDYCCVHAALAMREDGYE 596

Query: 680  TIMMNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIH 739
            TIM+N NPETVSTDYDTSDRLYFEP+T+EDVL ++D E+P G+IVQ+GGQTPLKL+L + 
Sbjct: 597  TIMVNCNPETVSTDYDTSDRLYFEPVTLEDVLEIVDKEKPVGVIVQYGGQTPLKLALGLE 656

Query: 740  QYLDEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADAL 799
                      A G   V I GTSPD IDAAEDRERF  ++ +L + QP    A++E +AL
Sbjct: 657  ----------AEG---VPIIGTSPDMIDAAEDRERFQKLLGDLGLRQPPNATARTEPEAL 703

Query: 800  AIAKEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEI 859
              A  +GYP+VVRPSYVLGGRAMEIV+    L  Y+  AV+V  + PVL+D++LS+AIE 
Sbjct: 704  EKAAALGYPLVVRPSYVLGGRAMEIVHEQRDLERYMREAVKVSNDSPVLLDRFLSNAIEC 763

Query: 860  DVDALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLN 919
            DVD + DS G   IGG+MEHIEQAGVHSGDSAC +P   +S   +D I   T  +A+ L+
Sbjct: 764  DVDCVRDSAGVTFIGGVMEHIEQAGVHSGDSACSLPPYYLSQPTIDEIKRQTAAMAEGLS 823

Query: 920  VCGLMNCQYAITTSGD---VYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDL 976
            V GLMN Q+AI        +Y+LE NPRASRTVPFVSKA G  LAK AA  M+G++L   
Sbjct: 824  VVGLMNVQFAIQEVDGKDVIYVLEVNPRASRTVPFVSKATGIQLAKVAARCMAGQTLASQ 883

Query: 977  GFTKEVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQ 1036
            G TKEV P + SVKEAV PF KF G D +LGPEM+STGEVMG+  +F  AF K+Q+ AG 
Sbjct: 884  GITKEVTPPYFSVKEAVFPFVKFPGVDTILGPEMKSTGEVMGVGKTFGEAFVKSQLGAGT 943

Query: 1037 KLPLSGTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEG 1096
            KLP SG VFL++ +  KP    IA+  + +GF++V+T GTA  ++  G+ V+ V K+ EG
Sbjct: 944  KLPTSGKVFLTVKNADKPRAVDIARQLVAMGFELVATKGTAAAIDAAGVPVQVVNKVTEG 1003

Query: 1097 RPHAGDMVANGQIQMMVITSSGDSLDQI-DGLKLRRRGLAYKVPVITTVSGALANAEAIR 1155
            RPH  DM+ N +I +MVI +  +  + I D   +R   L  +V   TT+ GA A  E ++
Sbjct: 1004 RPHIVDMIKNNEI-VMVINTVEERRNAIADSRAIRTSSLLARVTTFTTIFGAEAAVEGMK 1062

Query: 1156 SL 1157
             +
Sbjct: 1063 YM 1064


>gi|107103853|ref|ZP_01367771.1| hypothetical protein PaerPA_01004924 [Pseudomonas aeruginosa PACS2]
          Length = 1055

 Score = 1234 bits (3194), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 613/1072 (57%), Positives = 793/1072 (73%), Gaps = 28/1072 (2%)

Query: 104  VIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLADRTYITPMTPELVEQVL 163
            +IGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +AD TYI P+    V +++
Sbjct: 1    MIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPAMADATYIEPIKWATVAKII 60

Query: 164  EKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDAIKKAEDRDLFKQAMKT 223
            EKERPDALLPTMGGQTALN A+ L   G LEK+GVE+IGA  D I KAEDR  F +AMK 
Sbjct: 61   EKERPDALLPTMGGQTALNCALDLERHGVLEKFGVEMIGANADTIDKAEDRSRFDKAMKD 120

Query: 224  IGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGIAYNKEEFEAICKAGLA 283
            IG+  P SGI ++++E   +  ++G FP IIRP+FT+GGTGGGIAYN+EEFE IC  GL 
Sbjct: 121  IGLACPRSGIAHSMEEAYGVLEQVG-FPCIIRPSFTMGGTGGGIAYNREEFEEICARGLD 179

Query: 284  ASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMGVHTGDSITVAPAQTLT 343
             S T+++L+++SL+GWKEYE+EV+RD  DN +I+CSIEN DPMGVHTGDSITVAPAQTLT
Sbjct: 180  LSPTNELLIDESLIGWKEYEMEVVRDKKDNCIIVCSIENFDPMGVHTGDSITVAPAQTLT 239

Query: 344  DKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMNPRVSRSSALASKATGF 403
            DKEYQ +R+ S+A++REIGVE GGSNVQF + P  G ++VIEMNPRVSRSSALASKATGF
Sbjct: 240  DKEYQIMRNASLAVLREIGVETGGSNVQFGICPNTGRMVVIEMNPRVSRSSALASKATGF 299

Query: 404  PIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPRFAFEKFPGSEPLLTTQ 462
            PIAK+AAKL+VGY+LD++ NDIT  +TPASFEP+IDYVVTKIPRFAFEKFP ++  LTTQ
Sbjct: 300  PIAKIAAKLAVGYTLDELQNDITGGRTPASFEPAIDYVVTKIPRFAFEKFPKADARLTTQ 359

Query: 463  MKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDWEQ----LKYSLRVPNP 518
            MKSVGE MA+GRTFQES QKALR LE G +G+      +LD +  +    LK  L VP+ 
Sbjct: 360  MKSVGEVMAIGRTFQESVQKALRGLEVGATGFD----PKLDLNDPEADSILKRELTVPSA 415

Query: 519  DRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSVSNMTKDDFYEVK 578
            +R+  +  A + G  V+E+ EL+ ID+WFL Q ++L+  E+ + T  +S++ ++  Y++K
Sbjct: 416  ERVWYVADAFRAGKSVEEVFELTRIDEWFLVQIEDLVKDEEKVKTLGLSSIDRELMYKLK 475

Query: 579  RRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTPYMYSSYDFECES 638
            R+GFSD ++A     TEK +R  R  L V+P YKRVDTCAAEF  +T YMYS+Y+ ECE+
Sbjct: 476  RKGFSDARLAKLLGVTEKNLRSHRHKLKVLPVYKRVDTCAAEFATDTAYMYSTYEEECEA 535

Query: 639  APTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSNPETVSTDYDTSD 698
             P+ ++K++ILGGGPNRIGQGIEFDYCC H + +++  GYETIM+N NPETVSTDYDTSD
Sbjct: 536  NPSSREKIMILGGGPNRIGQGIEFDYCCVHAALAMREDGYETIMVNCNPETVSTDYDTSD 595

Query: 699  RLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHRLPSASGDGLVRI 758
            RLYFEP+T+EDVL ++ +E+P+G+IVQ+GGQTPLKL     + L+E  +P         I
Sbjct: 596  RLYFEPVTLEDVLEIVRVEQPKGVIVQYGGQTPLKLC----RALEEAGVP---------I 642

Query: 759  WGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEIGYPVVVRPSYVLG 818
             GTSPD+ID AEDRERF  +++ L++ QP    A+SE +ALA +K IGYP+VVRPSYVLG
Sbjct: 643  IGTSPDAIDRAEDRERFQQMVQRLNLRQPANATARSEDEALAASKAIGYPLVVRPSYVLG 702

Query: 819  GRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALADSCGNVVIGGIME 878
            GRAMEIVY +E L  Y+  AV+V  + PVL+D +L+ AIE+D+DA+ D    VVIG IM+
Sbjct: 703  GRAMEIVYQEEELKRYMREAVQVSNDSPVLLDHFLNCAIEVDIDAVCDG-EIVVIGAIMQ 761

Query: 879  HIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNCQYAITTSGDVYL 938
            HIEQAGVHSGDSAC +P  ++     D I     K+A  L V GLMN Q A+    D+++
Sbjct: 762  HIEQAGVHSGDSACSLPPYSLPQHIQDEIREQVKKMALELGVVGLMNVQMAVQGE-DIFV 820

Query: 939  LEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPKHVSVKEAVLPFEK 998
            +E NPRASRTVPFVSK +G  LAK AA VM+GK+L ++GFT+E+IP   SVKEAV PF K
Sbjct: 821  IEVNPRASRTVPFVSKCVGESLAKVAARVMAGKTLAEVGFTQEIIPPFFSVKEAVFPFAK 880

Query: 999  FQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVFLSLNDLTKPHLER 1058
            F G D +LGPEM+STGEVMG+  SF  AFAKAQ+ A + LP +G  F+S+ +  KP   +
Sbjct: 881  FPGVDPILGPEMKSTGEVMGVGDSFAEAFAKAQLGASEILPTAGCAFISVREDDKPFAAQ 940

Query: 1059 IAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVANGQIQMMVITSSG 1118
            +A   + +GF++V+T+GTA  +E  G+ V RV K+ EGRPH  DM+ N ++ +++ T+ G
Sbjct: 941  VAGDLVALGFEVVATAGTARVIEAAGLPVRRVNKVTEGRPHVVDMIKNDEVTLIINTTEG 1000

Query: 1119 DSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTVTMTALQDF 1170
                  D   +RR  L +K+   TT++G  A  EA++     TV    LQD 
Sbjct: 1001 RQ-SIADSYSIRRNALQHKICCTTTIAGGQAICEALKFGPEKTVRR--LQDL 1049



 Score =  234 bits (598), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 143/390 (36%), Positives = 218/390 (55%), Gaps = 19/390 (4%)

Query: 94  KILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLADRTYITP 153
           KI+ILG GP  IGQ  EFDY    A  A++E+GYE I++N NP T+ TD   +DR Y  P
Sbjct: 542 KIMILGGGPNRIGQGIEFDYCCVHAALAMREDGYETIMVNCNPETVSTDYDTSDRLYFEP 601

Query: 154 MTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDAIKKAED 213
           +T E V +++  E+P  ++   GGQT L L  AL E+      GV +IG   DAI +AED
Sbjct: 602 VTLEDVLEIVRVEQPKGVIVQYGGQTPLKLCRALEEA------GVPIIGTSPDAIDRAED 655

Query: 214 RDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGIAYNKEE 273
           R+ F+Q ++ + ++ P +    + DE ++ +  IG +PL++RP++ LGG    I Y +EE
Sbjct: 656 RERFQQMVQRLNLRQPANATARSEDEALAASKAIG-YPLVVRPSYVLGGRAMEIVYQEEE 714

Query: 274 FEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMGVHTGDS 333
            +   +  +  S  S VL++  L    E +++ + D  + VVI   +++++  GVH+GDS
Sbjct: 715 LKRYMREAVQVSNDSPVLLDHFLNCAIEVDIDAVCD-GEIVVIGAIMQHIEQAGVHSGDS 773

Query: 334 ITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMNPRVSRS 393
               P  +L       +R+    +  E+GV  G  NVQ AV   D  + VIE+NPR SR+
Sbjct: 774 ACSLPPYSLPQHIQDEIREQVKKMALELGV-VGLMNVQMAVQGED--IFVIEVNPRASRT 830

Query: 394 SALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRFAFEKFP 453
               SK  G  +AK+AA++  G +L ++    T++    F         K   F F KFP
Sbjct: 831 VPFVSKCVGESLAKVAARVMAGKTLAEV--GFTQEIIPPF------FSVKEAVFPFAKFP 882

Query: 454 GSEPLLTTQMKSVGEAMALGRTFQESFQKA 483
           G +P+L  +MKS GE M +G +F E+F KA
Sbjct: 883 GVDPILGPEMKSTGEVMGVGDSFAEAFAKA 912


>gi|410665926|ref|YP_006918297.1| carbamoyl phosphate synthase large subunit [Simiduia agarivorans SA1
            = DSM 21679]
 gi|409028283|gb|AFV00568.1| carbamoyl phosphate synthase large subunit [Simiduia agarivorans SA1
            = DSM 21679]
          Length = 1073

 Score = 1234 bits (3193), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 614/1070 (57%), Positives = 790/1070 (73%), Gaps = 20/1070 (1%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILI+GAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIKSILIIGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPAMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  + V  ++EKERPDA+LPTMGGQTALN A+AL + G LEK+GVELIGA  +A
Sbjct: 63   ATYIEPIEWQTVAAIIEKERPDAVLPTMGGQTALNCALALHKHGVLEKFGVELIGANEEA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I+KAEDR+LF QAMK IG++   + I +T++E   +  E G FP IIRP+FT+GG+GGGI
Sbjct: 123  IEKAEDRELFDQAMKKIGLECARAKIVHTMEEAKEVPKEFG-FPCIIRPSFTMGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN EEFE IC  GL  S T+++L+++SL+GWKEYE+EV+RD  DN +I+CSIEN DPMG
Sbjct: 182  AYNWEEFEEICARGLDLSPTNELLIDESLIGWKEYEMEVVRDKNDNCIIVCSIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGVE GGSNVQFAV+P  G ++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQIMRNASVAVLREIGVETGGSNVQFAVDPKTGRLVVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT   TPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGYTLDELQNDITGGATPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWG-CSNVKELDWD 505
            F FEKF  ++  LTTQMKSVGE MA+GRTFQES QKALR LE G +G+    ++ E D  
Sbjct: 362  FTFEKFGEADARLTTQMKSVGEVMAIGRTFQESVQKALRGLEVGSAGFEPIVDLNEPDA- 420

Query: 506  WEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQS 565
               ++  L  P   R+  +  A + G+ VD++  LS ID WFL Q K+++D E  L + +
Sbjct: 421  MTLIRRDLTTPGAKRIWYVADAFRAGLSVDDVFNLSAIDPWFLVQIKDIVDTELSLASVT 480

Query: 566  VSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANT 625
            +S++  +  + +KR+GFSDK++A     TEK  R+ R  L + P YKRVDTCAAEF  +T
Sbjct: 481  MSSLDAEKMFALKRKGFSDKRLAKLLGVTEKTFRKHRQGLNIRPVYKRVDTCAAEFSTST 540

Query: 626  PYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNS 685
             YMYS+Y+ ECE+ P+ + K+L+LGGGPNRIGQGIEFDYCC H + +++  GYETIM+N 
Sbjct: 541  AYMYSTYEEECEANPSGRDKILVLGGGPNRIGQGIEFDYCCVHAALAMRDDGYETIMVNC 600

Query: 686  NPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEH 745
            NPETVSTDYDTSDRL+FEP+T+EDVL +++LE+P+G+IVQFGGQTPLKL+    + L+E 
Sbjct: 601  NPETVSTDYDTSDRLFFEPVTLEDVLEIVELEKPKGVIVQFGGQTPLKLA----RALEEA 656

Query: 746  RLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEI 805
             +P         I GTS D+ID AEDRERF  ++  L ++QP   I +S  +AL  A+ +
Sbjct: 657  GVP---------IIGTSSDAIDRAEDRERFQQMVIRLGLKQPANAIVRSTEEALRSAEGV 707

Query: 806  GYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALA 865
            GYP+VVRPSYVLGGRAMEIVY +  L TY+  AV+   + PVL+D +L++AIE+D+DA++
Sbjct: 708  GYPLVVRPSYVLGGRAMEIVYNESELKTYMREAVQASEDAPVLLDHFLNNAIEVDIDAVS 767

Query: 866  DSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMN 925
            D   +VVIG IM+HIEQ GVHSGDSAC +P  ++     + +     K+A  L V GLMN
Sbjct: 768  DG-KDVVIGAIMQHIEQCGVHSGDSACSLPPYSLDKDVQNEMREQVRKMAIELGVIGLMN 826

Query: 926  CQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPK 985
             Q A    G++Y++E NPRASRTVPFVSK IG  LAK AA   +G SL D GFT+E++P 
Sbjct: 827  VQLAY-QDGEIYVIEVNPRASRTVPFVSKCIGVSLAKVAARCQAGMSLADQGFTREIVPS 885

Query: 986  HVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVF 1045
            + SVKEAV PF KF   D +LGPEMRSTGEVMG+  +F  AFAKAQ+ AG  LP  G  F
Sbjct: 886  YYSVKEAVFPFNKFPSVDPILGPEMRSTGEVMGVGDTFAEAFAKAQLGAGDVLPTKGKAF 945

Query: 1046 LSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVA 1105
            +S+ D  K  +  +AK   D+GF++ +T GTA  +E  G+ V+ V K++EGRPH  DM+ 
Sbjct: 946  ISVRDFDKDSMITVAKELADLGFELCATRGTAAVIEAAGLTVQTVNKVNEGRPHIVDMIK 1005

Query: 1106 NGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIR 1155
            N +I +++ T+ G    + D   +RR    ++V   TT++ A A   AIR
Sbjct: 1006 NDEIDLIINTTEGKQAIK-DSASIRRGAEGHRVYYTTTLAAAEALCVAIR 1054


>gi|440712506|ref|ZP_20893122.1| carbamoyl phosphate synthase large subunit [Rhodopirellula baltica
            SWK14]
 gi|436442661|gb|ELP35772.1| carbamoyl phosphate synthase large subunit [Rhodopirellula baltica
            SWK14]
          Length = 1083

 Score = 1234 bits (3193), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 629/1092 (57%), Positives = 797/1092 (72%), Gaps = 29/1092 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            +R D++KIL++G+GPIVIGQACEFDYSGTQACKAL+EEGYEV+L+NSNPATIMTDP  AD
Sbjct: 3    RRDDIKKILLIGSGPIVIGQACEFDYSGTQACKALREEGYEVVLVNSNPATIMTDPATAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+T ++VE+V+ KERPDALLPT+GGQT LN+A+ L  +G LEKYGVE+I A    
Sbjct: 63   ATYIEPLTWQIVEKVIAKERPDALLPTLGGQTGLNVAMDLDANGVLEKYGVEMIAANAKV 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAE+R+ FKQAM  IG+         TL +      E+G  P ++RP+FT+GG+G  I
Sbjct: 123  IAKAEEREQFKQAMDKIGLDVCKGFTVRTLADARKALAEVG-LPAVVRPSFTMGGSGSAI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYNK++F+++ + GL  S  ++VL+E+S++GWKEYE+EVMRD  DNVVIIC+IEN DPMG
Sbjct: 182  AYNKDDFDSLVQNGLDQSPVTEVLIEESIIGWKEYEMEVMRDCDDNVVIICAIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTL+DKEYQR+RD S+A+IREIGVE GGSN+QFA+ P  G ++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLSDKEYQRMRDASLAVIREIGVETGGSNIQFAIEPDTGRMIVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRF 447
            PRVSRSSALASKATGFPIAK+AAKL+VGY L ++PNDIT+KT A FEP+IDYVVTK+PRF
Sbjct: 302  PRVSRSSALASKATGFPIAKIAAKLAVGYRLWELPNDITQKTKACFEPTIDYVVTKMPRF 361

Query: 448  AFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDWE 507
            AFEKFP ++  LTTQMKSVGE M++GRTFQESFQKALR LE G  G+G S+ K+L W  E
Sbjct: 362  AFEKFPEADATLTTQMKSVGETMSIGRTFQESFQKALRGLEVGAFGFG-SDPKDL-WGTE 419

Query: 508  ------QLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFL 561
                  +++  L  P  +R+  I  A K GM   EIH L+ ID WFL   ++LI+ E  L
Sbjct: 420  DQPSRDEIRAKLSTPGSERVFYIRYAFKDGMTAAEIHSLTNIDPWFLDHLQQLIETEDNL 479

Query: 562  LT-QSVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAE 620
                 +  +  D   + KRRGFSD+QIA  T  TE +VR KRL +G+ P YK VDTCAAE
Sbjct: 480  RAIGKLDAIDADTMRDAKRRGFSDRQIATITSKTESQVRAKRLEMGIRPVYKSVDTCAAE 539

Query: 621  FEANTPYMYSSYDFECE-SAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYE 679
            FEA TPY YS+Y+ E E  A   KK+V+ILGGGPNRIGQGIEFDYCCCH SF+LQ  G E
Sbjct: 540  FEAFTPYYYSTYESETEVPAKGDKKRVVILGGGPNRIGQGIEFDYCCCHASFALQEMGIE 599

Query: 680  TIMMNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIH 739
            +IM+NSNPETVSTDYDTSD L+FEPLT+EDVLN+ D  +P+G+IVQFGGQTPL L+  + 
Sbjct: 600  SIMVNSNPETVSTDYDTSDILFFEPLTIEDVLNICDAMQPDGVIVQFGGQTPLNLARGLE 659

Query: 740  QYLDEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADAL 799
            Q               V I GTS D+ID AEDRE F+++I EL + QP  GIA++  +A 
Sbjct: 660  Q-------------AGVPIIGTSVDTIDTAEDRELFSSLIDELGLRQPPSGIARNMDEAR 706

Query: 800  AIAKEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEI 859
              AK IGYP +VRPS+VLGGRAMEI Y       Y+  A  V   +PVLID++L DA E+
Sbjct: 707  VEAKRIGYPALVRPSFVLGGRAMEICYDHSQFARYVAEAFIVADGQPVLIDRFLEDATEV 766

Query: 860  DVDALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLN 919
            DVDA++D   + VI GIMEHIE+AGVHSGDSAC IP  +++   L  I   T KLA RLN
Sbjct: 767  DVDAISDG-NDCVIMGIMEHIEEAGVHSGDSACCIPPFSLTQPVLAEIRDATRKLAARLN 825

Query: 920  VCGLMNCQYAITTSG---DVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDL 976
            V GLMN Q+A+   G    +Y+LE NPRASRTVPFV+KA G P+A  A  VM+G++L +L
Sbjct: 826  VVGLMNIQFAVKMEGTQPTLYILEVNPRASRTVPFVAKATGVPVANLATKVMAGQTLKEL 885

Query: 977  GFTKEVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQ 1036
              T+E IP+HVS+KE+VLPF KF G D++LGPEMRSTGEVMG+   F IAFAK+Q+AAG 
Sbjct: 886  NVTEEPIPRHVSIKESVLPFRKFAGVDIVLGPEMRSTGEVMGVSELFSIAFAKSQLAAGT 945

Query: 1037 KLPLSGTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEG 1096
             LP SG +FLSL+   K   E + K+ +++GF++++T GTA  LE  GIAV RV K+ EG
Sbjct: 946  VLPESGKIFLSLSANHKEAAESLGKSLIELGFELLATEGTAVRLEANGIAVTRVKKLSEG 1005

Query: 1097 RPHAGDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRS 1156
             P+  D + N  +Q+++ T SG      +G K+R  G+ + VP ITT++ A A   A+ +
Sbjct: 1006 HPNLIDYLKNDDVQLILNTPSGKGARTDEG-KIRAAGVQHGVPCITTLAAAEAAVRAMVA 1064

Query: 1157 LKSNTVTMTALQ 1168
            ++   + + +LQ
Sbjct: 1065 MRDTPMEVESLQ 1076


>gi|386814629|ref|ZP_10101847.1| carbamoyl-phosphate synthase large subunit [Thiothrix nivea DSM 5205]
 gi|386419205|gb|EIJ33040.1| carbamoyl-phosphate synthase large subunit [Thiothrix nivea DSM 5205]
          Length = 1073

 Score = 1234 bits (3193), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 627/1088 (57%), Positives = 804/1088 (73%), Gaps = 22/1088 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD+  ILI+GAGPI+IGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDINSILIIGAGPIIIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPNMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
              YI P+  E V +++EKERPD +LPTMGGQTALN A+ LA +G LEK+ VE+IGAK ++
Sbjct: 63   AIYIEPIRWETVARIIEKERPDVILPTMGGQTALNCALDLARNGVLEKFNVEMIGAKEES 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I  AEDR  F+ AM  IG+++  SGI ++++E  ++  E+G FP +IRP+FT+GG+GGGI
Sbjct: 123  IDMAEDRQKFRVAMDEIGLESARSGIAHSMEEARAVQAELG-FPTVIRPSFTMGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYNK+EFE I   GL  S T++VL+E+SLLGWKEYE+EV+RD  DN +IICSIEN+DPMG
Sbjct: 182  AYNKQEFETIVARGLDMSPTTEVLLEESLLGWKEYEMEVVRDSNDNCIIICSIENLDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            +HTGDSITVAPAQTLTDKEYQ LR+ S+A++R+IGV+ GGSNVQF+VNP +G ++VIEMN
Sbjct: 242  IHTGDSITVAPAQTLTDKEYQLLRNASLAVLRKIGVDTGGSNVQFSVNPNNGRIVVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKK-TPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VG++LD++ N+IT   TP+SFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGFTLDELRNEITGGVTPSSFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            F FEKFP ++P LTTQMKSVGE MA+GRTFQESFQKALR LE G  G     V   D D 
Sbjct: 362  FTFEKFPNADPRLTTQMKSVGEVMAIGRTFQESFQKALRGLETGIDGLN-ERVDLQDPDA 420

Query: 507  EQL-KYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQS 565
            + + +  L   + +R+  +  A + GM ++E+ E + ID WFL Q KEL+D+E  L  + 
Sbjct: 421  KDIIRRELTEASSERILYVGDAFRIGMTLEEVFEQTSIDMWFLVQIKELVDLENGLKERI 480

Query: 566  VSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANT 625
            +++++ ++ + +KR+GFSD++IA  T  TEK VR  R  L V P YKRVDTCAAEF  NT
Sbjct: 481  LNDISAEEMFMLKRKGFSDRRIADLTHETEKAVRSARQRLNVRPVYKRVDTCAAEFATNT 540

Query: 626  PYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNS 685
             YMYS+Y+ ECES PT +KK+++LGGGPNRIGQGIEFDYCC H + +++  G+ETIM+N 
Sbjct: 541  AYMYSTYEEECESNPTDRKKIMVLGGGPNRIGQGIEFDYCCVHAALAMREDGFETIMVNC 600

Query: 686  NPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEH 745
            NPETVSTDYDTSDRLYFEPLT+EDV+ V++LE+P G+IVQ+GGQTPLKL+    + L+  
Sbjct: 601  NPETVSTDYDTSDRLYFEPLTLEDVMEVVELEKPVGVIVQYGGQTPLKLA----RDLEAL 656

Query: 746  RLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEI 805
              P         I GTSPDSID AEDRERF  +I +L ++QP    A+S  +A+ +A EI
Sbjct: 657  GAP---------IIGTSPDSIDLAEDRERFQQLINKLGLKQPPNRTARSLDEAVRLADEI 707

Query: 806  GYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALA 865
            GYP+VVRPSYVLGGRAMEIVY +  L  Y+  AV V  + PVL+D+YL DA+E+DVDA+ 
Sbjct: 708  GYPLVVRPSYVLGGRAMEIVYHENELRRYMNTAVSVSNDSPVLLDRYLDDAVEVDVDAIC 767

Query: 866  DSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMN 925
            D   NV+IGGIM+HIEQAG+HSGDSAC +P  ++     D +    +++ K LNV GLMN
Sbjct: 768  DG-ENVLIGGIMQHIEQAGIHSGDSACSLPPYSLKPVVQDELREQMVRMGKALNVVGLMN 826

Query: 926  CQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPK 985
             Q+AI    ++++LE NPRASRTVPFVSKAIG PLAK AA  M+G++L D     E+IP 
Sbjct: 827  AQFAIKND-EIFILEVNPRASRTVPFVSKAIGRPLAKVAARCMAGQTLADQNALNEIIPS 885

Query: 986  HVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVF 1045
            + SVKEAV PF KF G D +L PEM+STGEVMG+  SF  AF KAQ AAG+  P SG  F
Sbjct: 886  YYSVKEAVFPFIKFPGVDPILSPEMKSTGEVMGVGKSFAEAFGKAQYAAGENYPTSGVAF 945

Query: 1046 LSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVA 1105
            +S+ +  + HL+ + +      FKIV+T GTA  L+  GI  E V KM EGRP+  DM+ 
Sbjct: 946  VSVREADRKHLKEVGELLAAQNFKIVATRGTARELQNVGIQCEVVNKMREGRPNIVDMIK 1005

Query: 1106 NGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTVTMT 1165
            N +I ++V T+ G+   + D  ++RR  L +K+   TT++GA A   A+    S  V   
Sbjct: 1006 NEEIDLIVNTTEGEQSTR-DSFEIRREALQHKITYTTTIAGARALCRAMAYTDSEQV--Y 1062

Query: 1166 ALQDFFDV 1173
             LQD   V
Sbjct: 1063 CLQDLHRV 1070


>gi|348029576|ref|YP_004872262.1| carbamoyl-phosphate synthase large subunit [Glaciecola
            nitratireducens FR1064]
 gi|347946919|gb|AEP30269.1| carbamoyl-phosphate synthase large subunit [Glaciecola
            nitratireducens FR1064]
          Length = 1073

 Score = 1234 bits (3193), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 621/1088 (57%), Positives = 792/1088 (72%), Gaps = 28/1088 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTDL+ ILILGAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDLKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  E+V  ++ KERPDA+LPTMGGQTALN A+ L + G LE++ VELIGA  DA
Sbjct: 63   ATYIEPIQWEVVRNIIAKERPDAVLPTMGGQTALNCALDLNKYGVLEEFNVELIGASADA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR+ F +AMK+IG++ P + I + L++   ++  IG FP IIRP+FT+GG+GGGI
Sbjct: 123  IDKAEDRERFDKAMKSIGLECPRAEIAHNLEQAYDVSTRIG-FPCIIRPSFTMGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYNK+EF  IC  GL  S TS++L+++SL+GWKEYE+EV+RD ADN +I+C+IEN+DPMG
Sbjct: 182  AYNKDEFTEICTRGLDLSPTSELLIDESLIGWKEYEMEVVRDKADNCIIVCTIENIDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKE+Q +R+ ++A++REIGVE GGSNVQF V P  G +++IEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEFQIMRNAAMAVLREIGVETGGSNVQFGVCPDTGRMVIIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKK-TPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL++GY+LD++ NDIT   TPASFEP+IDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKIAAKLAIGYTLDELANDITGGLTPASFEPAIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            F FEKF GS   LTTQMKSVGE MA+GR  QES QKALR LE G SG        LD + 
Sbjct: 362  FNFEKFAGSNDRLTTQMKSVGEVMAIGRNMQESLQKALRGLEVGVSGLN----PILDLND 417

Query: 507  EQLK----YSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLL 562
             + K    Y LR P  +R+  I  A + GM VDE+H L+ ID+W+L Q ++++ +EQ + 
Sbjct: 418  PEAKNKIIYELREPGAERIWYIGDAFRMGMSVDEVHSLTNIDRWYLVQIEDIVQLEQLVE 477

Query: 563  TQSVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFE 622
               +S + +     +KR+GF+D ++A  T   E +VR+ R    V+P YKRVDTCAAEF 
Sbjct: 478  RIGLSEIDEKLMRTLKRKGFADARLAELTSVAEDDVRDMRNKFNVLPVYKRVDTCAAEFS 537

Query: 623  ANTPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIM 682
             +T YMYS+YD ECES P+ + K+++LGGGPNRIGQGIEFDYCC H + +++  GYETIM
Sbjct: 538  TSTAYMYSTYDEECESNPSDRDKIMVLGGGPNRIGQGIEFDYCCVHAALAMREDGYETIM 597

Query: 683  MNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYL 742
            +N NPETVSTDYDTSDRLYFEP+T+EDVL ++ +E+P+G+IVQ+GGQTPLKL+    + L
Sbjct: 598  VNCNPETVSTDYDTSDRLYFEPVTLEDVLEIVRIEKPKGVIVQYGGQTPLKLA----RAL 653

Query: 743  DEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIA 802
             E+ +P         I GTSPD+ID AEDRERF  ++ +L ++QP      +  +A+  A
Sbjct: 654  KENGVP---------IIGTSPDAIDRAEDRERFQHMVNKLGLKQPANATVSNMEEAMTQA 704

Query: 803  KEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVD 862
              IG+P+VVRPSYVLGGRAMEIVY  + L  YL  AV+V  + PVL+D++L DAIE+D+D
Sbjct: 705  AIIGFPLVVRPSYVLGGRAMEIVYDLQDLRRYLNEAVKVSNDSPVLLDRFLDDAIEVDID 764

Query: 863  ALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCG 922
            A+ D    VVIGGIMEHIEQAGVHSGDSAC +P  T+S+   D +     ++A  L V G
Sbjct: 765  AICDG-EQVVIGGIMEHIEQAGVHSGDSACSLPPYTLSNEIQDVMRKQVTQMALELEVVG 823

Query: 923  LMNCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEV 982
            LMN Q+AI  + +VYL+E NPRA+RTVPFVSKA G PLAK AA VM+G SL   GFTKE+
Sbjct: 824  LMNTQFAIKDN-EVYLIEVNPRAARTVPFVSKATGAPLAKIAARVMAGTSLAKQGFTKEI 882

Query: 983  IPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSG 1042
            IP   SVKE VLPF KFQG D LLGPEMRSTGEVMG+   F  A+AKA + A   LP+ G
Sbjct: 883  IPPFFSVKEVVLPFAKFQGVDPLLGPEMRSTGEVMGVGNGFDEAYAKANLGASAPLPVEG 942

Query: 1043 TVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGD 1102
             V LS+ +  K  L  +AK  ++ GF + +T GTAHFL   G+    V K+ EGRP+  D
Sbjct: 943  KVLLSVRNNDKQRLIGLAKEMIEQGFTVEATKGTAHFLGEHGVKCAVVNKLSEGRPNIVD 1002

Query: 1103 MVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTV 1162
             + NG+   +V T+ G      D + +RR  L  K+   TT++ A A   A R+  + T 
Sbjct: 1003 AIKNGEYCYVVNTTEGRQAIN-DSVYIRREALLNKISYTTTLNAAFATIRA-RTADAKT- 1059

Query: 1163 TMTALQDF 1170
             +T++Q+ 
Sbjct: 1060 NVTSVQEL 1067


>gi|347755492|ref|YP_004863056.1| carbamoyl-phosphate synthase large subunit [Candidatus
            Chloracidobacterium thermophilum B]
 gi|347588010|gb|AEP12540.1| carbamoyl-phosphate synthase large subunit [Candidatus
            Chloracidobacterium thermophilum B]
          Length = 1079

 Score = 1234 bits (3193), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 620/1083 (57%), Positives = 793/1083 (73%), Gaps = 23/1083 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTDLRKIL++G+GPIVIGQACEFDYSGTQACKAL+ EGYEV+LINSNPATIMTDP +AD
Sbjct: 3    KRTDLRKILVIGSGPIVIGQACEFDYSGTQACKALRAEGYEVVLINSNPATIMTDPEMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+T E V  VLE+ERPDALLPT+GGQTALNLA+ LA++G L++ GV+LIGA + A
Sbjct: 63   GTYIEPLTLEAVTAVLERERPDALLPTVGGQTALNLAMQLAQTGVLDRLGVQLIGANIAA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I+ AE R  FK AM+ IG++   +           +   IG +P I+RP+FTLGG GGGI
Sbjct: 123  IELAESRRQFKAAMEDIGLEMTKAMFVTPETNLEEVRAAIG-YPAIVRPSFTLGGAGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN EEF  I + GLA S   +V+VE+S+LGWKEYELEVMRD ADN+VI+CSIEN DPMG
Sbjct: 182  AYNDEEFYQIVERGLALSPVHEVVVEESVLGWKEYELEVMRDAADNIVIVCSIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTD+EYQ LRD S+ IIR IGVE GGSN+QFAVNP DG V VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDREYQTLRDASLKIIRRIGVETGGSNIQFAVNPKDGRVRVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRF 447
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD+IPNDIT+KTPASFEP++DYVV KIP++
Sbjct: 302  PRVSRSSALASKATGFPIAKIAAKLAVGYTLDEIPNDITRKTPASFEPTLDYVVVKIPKW 361

Query: 448  AFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDWE 507
            AFEKF  +EP+L TQMKSVGEAMA+GRTF+E+F KALRSLE        + V     D +
Sbjct: 362  AFEKFQAAEPVLGTQMKSVGEAMAIGRTFKEAFMKALRSLEA-----SAARVPTYTND-D 415

Query: 508  QLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSVS 567
             L+  L  PNP+R++ +  A+++G    E+HEL+ ID WFL Q KE+ D +  L  +++ 
Sbjct: 416  DLRRHLITPNPERVRYLQMALERGWSCTELHELTAIDPWFLHQLKEIADAQNALRGRTLE 475

Query: 568  NMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTPY 627
            ++   +   VKR GFSD+++A     +E +VR +RL  G+ P +KR+DTCAAEF ++TPY
Sbjct: 476  DIPDAELRHVKRLGFSDRRVARTIGCSEADVRARRLRSGIRPVFKRIDTCAAEFASHTPY 535

Query: 628  MYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSNP 687
            +YS+Y+ ECE+ PT ++K++ILG GPNRIGQGIEFDYCCCH SF+LQ AGYETIM+N NP
Sbjct: 536  LYSTYEEECEAEPTSRRKIVILGSGPNRIGQGIEFDYCCCHASFALQEAGYETIMVNCNP 595

Query: 688  ETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHRL 747
            ETVSTDYDTSDRLYFEP+T EDV+++I+ E+P+G+IVQFGGQTPL L+  + Q       
Sbjct: 596  ETVSTDYDTSDRLYFEPVTFEDVMHIIEREQPDGVIVQFGGQTPLNLAYGLRQ------- 648

Query: 748  PSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEIGY 807
                    V I GTSP+SID AEDRERF  +++EL I QP  G+A +  +A A+A+++GY
Sbjct: 649  ------AGVPIIGTSPESIDLAEDRERFGRLLRELEIPQPPSGMAATVDEACAVARQVGY 702

Query: 808  PVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALADS 867
            PV+VRPSYVLGGRAM I Y + +L  Y+  A+   P R VLID +L  A+E+DVDAL+D 
Sbjct: 703  PVLVRPSYVLGGRAMMIAYDEPSLAAYVAEAMGASPGRAVLIDHFLESAVEVDVDALSDG 762

Query: 868  CGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNCQ 927
              +V I GI EHIE+AGVHSGDS+ ++PT  I    LD +  +T +LA+ L V GLMN Q
Sbjct: 763  -EDVCIAGIQEHIEEAGVHSGDSSSVLPTYLIEPWHLDVMRQYTRQLARALRVVGLMNIQ 821

Query: 928  YAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPKHV 987
            +A+     VY+LE NPRASRTVPFVSKA G P+AK AA +M G+ L D      +     
Sbjct: 822  FAVKDD-IVYVLEVNPRASRTVPFVSKATGVPIAKIAAWLMIGRRLADFNLPPMLSVGRF 880

Query: 988  SVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVFLS 1047
             +K  V PF KF G D +LGPEMRS GEVMG+  SF +A+ KAQ+ AG  LP +GT FLS
Sbjct: 881  FIKAPVFPFIKFPGVDPVLGPEMRSIGEVMGVADSFGMAYWKAQLGAGVPLPRTGTAFLS 940

Query: 1048 LNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVANG 1107
            +N+  KP   ++A+    +GFK+V+T GT   L   G+ VE V K++EGRP+  D++ + 
Sbjct: 941  VNNRDKPAALKVAQRLHRLGFKLVATRGTQEMLAAAGLPVEPVFKVNEGRPNIVDLIRSR 1000

Query: 1108 QIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTVTMTAL 1167
            +I ++V T  G +    D   +R   + Y VP ITT++GA+A   AI +L+ +  ++  L
Sbjct: 1001 RIDLIVNTPLGKA-SHFDEKAIRSAAIQYNVPCITTITGAIAVTSAIHALQHDQFSVGRL 1059

Query: 1168 QDF 1170
            QD+
Sbjct: 1060 QDY 1062


>gi|410629665|ref|ZP_11340362.1| carbamoyl-phosphate synthase large subunit [Glaciecola arctica
            BSs20135]
 gi|410150835|dbj|GAC17229.1| carbamoyl-phosphate synthase large subunit [Glaciecola arctica
            BSs20135]
          Length = 1072

 Score = 1234 bits (3193), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 623/1089 (57%), Positives = 798/1089 (73%), Gaps = 30/1089 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILILGAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  E+V++++EKERPDA+LPTMGGQTALN A+ L + G LE++GVE+IGA  DA
Sbjct: 63   ATYIEPIHWEVVKKIIEKERPDAVLPTMGGQTALNCALDLNKYGVLEEFGVEMIGATADA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR+ F +AMK+IG++ P + I +T++E   ++  IG FP IIRP+FT+GG+GGGI
Sbjct: 123  IDKAEDRERFDKAMKSIGLECPNAEIAHTIEEAFDVSTRIG-FPCIIRPSFTMGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYNK+EFE IC+ GL  S TS++L+++SL+GWKEYE+EV+RD ADN +I+C+IEN+DPMG
Sbjct: 182  AYNKQEFEEICRRGLDLSPTSELLIDESLIGWKEYEMEVVRDKADNCIIVCTIENIDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKE+Q +R+ +IA++REIGVE GGSNVQF V+P  G +++IEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEFQIMRNAAIAVLREIGVETGGSNVQFGVDPKTGRLVIIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKK-TPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL++GY+LD++ NDIT   TPASFEP+IDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAIGYTLDELANDITGGLTPASFEPTIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            F FEKF G+   LTTQMKSVGE MA+GR  QES QKALR LE G +G        +D + 
Sbjct: 362  FNFEKFAGANDRLTTQMKSVGEVMAIGRNQQESLQKALRGLEVGVNGLDSI----IDINA 417

Query: 507  EQLKYS----LRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLL 562
               K +    LR P  +R+  I  AM+ GM VDEI EL+ ID+W+L Q +ELI +EQ + 
Sbjct: 418  PDAKVTIIRELREPGAERIWYIADAMRMGMSVDEIFELTNIDRWYLVQIEELIILEQQIH 477

Query: 563  TQSVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFE 622
               +S++ +D    +KR+GF+D +IA  T   E +VRE R    + P YKRVDTCAAEF 
Sbjct: 478  ESGLSSIDEDLMKILKRKGFADSRIAELTGVDEADVREVRRGFDIHPVYKRVDTCAAEFS 537

Query: 623  ANTPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIM 682
            ++T YMYS+YD ECE+ PT   K+++LGGGPNRIGQGIEFDYCC H + +L+  GYETIM
Sbjct: 538  SDTAYMYSTYDEECEANPTDNDKIMVLGGGPNRIGQGIEFDYCCVHAALALREDGYETIM 597

Query: 683  MNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYL 742
            +N NPETVSTDYDTSDRLYFE +T+EDVL ++ +E+P+G+IVQ+GGQTPLKL+       
Sbjct: 598  VNCNPETVSTDYDTSDRLYFESVTLEDVLEIVRIEKPKGVIVQYGGQTPLKLA------- 650

Query: 743  DEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIA 802
               R   A+G   V I GTSPD+ID AEDRERF  ++ +L+++QP     ++   AL  A
Sbjct: 651  ---RELEAAG---VPIIGTSPDAIDKAEDRERFQKMVNKLNLKQPANATVRNLEQALVAA 704

Query: 803  KEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVD 862
             +IG+P+VVRPSYVLGGRAMEIVY    L  YL NAV+V  + PVL+D++L DAIE+DVD
Sbjct: 705  DKIGFPLVVRPSYVLGGRAMEIVYDINDLKRYLNNAVKVSNDSPVLLDRFLDDAIEVDVD 764

Query: 863  ALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCG 922
            A+ D   +VVIGGIMEHIEQAGVHSGDSAC +P  ++S+   D +      +A  L V G
Sbjct: 765  AICDGT-DVVIGGIMEHIEQAGVHSGDSACSLPPYSLSAEVQDVMRQQVKAMALELGVVG 823

Query: 923  LMNCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEV 982
            LMN Q+A+   G VYL+E NPRA+RTVPFVSKA G P+AK  A VM+G+SL   G TKE+
Sbjct: 824  LMNTQFAV-KDGQVYLIEVNPRAARTVPFVSKATGMPIAKIGARVMAGQSLASQGITKEI 882

Query: 983  IPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSG 1042
            IP   SVKE VLPF KFQG D LLGPEMRSTGEVMGI  +F  A+AKA + A Q +P+ G
Sbjct: 883  IPPFYSVKEVVLPFAKFQGVDPLLGPEMRSTGEVMGIGDTFEEAYAKANLGASQPIPVGG 942

Query: 1043 TVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGD 1102
               LS+    K  +  + +A +  GF + +T GTA  L   G+    V K+ EGRP+  D
Sbjct: 943  KALLSVRLNDKNRVIELGQAMVSKGFTLEATKGTAAVLNKAGVKCSVVNKLSEGRPNIVD 1002

Query: 1103 MVANGQIQMMVITSSG-DSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNT 1161
             + NG+   +V T+ G  ++D  D + +R+  L  KV   TT++ A A   A ++   + 
Sbjct: 1003 AIKNGEYCYIVNTTEGRQAID--DSVYIRKEALLNKVAYTTTMNAAFATVNANKA--DDR 1058

Query: 1162 VTMTALQDF 1170
              +T++QD 
Sbjct: 1059 ARVTSVQDL 1067


>gi|94311131|ref|YP_584341.1| carbamoyl phosphate synthase large subunit [Cupriavidus metallidurans
            CH34]
 gi|93354983|gb|ABF09072.1| carbamoyl-phosphate synthase large subunit [Cupriavidus metallidurans
            CH34]
          Length = 1082

 Score = 1234 bits (3193), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 624/1085 (57%), Positives = 803/1085 (74%), Gaps = 32/1085 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILI+GAGPI+IGQACEFDYSG QACKAL+EEG++VIL+NSNPATIMTDP  AD
Sbjct: 3    KRTDIKSILIIGAGPIIIGQACEFDYSGAQACKALREEGFKVILVNSNPATIMTDPNTAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+T E+VE+++EKERPDA+LPTMGGQTALN A+ L   G L+KY VELIGA  +A
Sbjct: 63   VTYIEPITWEVVERIIEKERPDAILPTMGGQTALNCALDLHRHGVLDKYKVELIGASPEA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGE------FPLIIRPAFTLG 261
            I KAEDR  FK AM  IG+ +  SGI +++DE +++ + I +      +P++IRP+FTLG
Sbjct: 123  IDKAEDRQKFKDAMTKIGLGSAKSGIAHSMDEAVAVQSRIAQETGTAGYPIVIRPSFTLG 182

Query: 262  GTGGGIAYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIE 321
            GTGGGIAYN+EEFE ICK GL  S T ++L+E+SLLGWKEYE+EV+RD ADN +IICSIE
Sbjct: 183  GTGGGIAYNREEFEEICKRGLDLSPTRELLIEESLLGWKEYEMEVVRDKADNCIIICSIE 242

Query: 322  NVDPMGVHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEV 381
            N+DPMG+HTGDSITVAPAQTLTDKEYQ LR+ S+A++REIGV+ GGSNVQF++NP DG +
Sbjct: 243  NLDPMGIHTGDSITVAPAQTLTDKEYQILRNASLAVLREIGVDTGGSNVQFSINPTDGRM 302

Query: 382  MVIEMNPRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYV 440
            +VIEMNPRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ N+IT  +TPASFEPSIDYV
Sbjct: 303  IVIEMNPRVSRSSALASKATGFPIAKVAAKLAVGYTLDELKNEITGGQTPASFEPSIDYV 362

Query: 441  VTKIPRFAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVK 500
            VTK+PRFAFEKFP ++  LTTQMKSVGE MA+GRTFQESFQKALR LE G  G     + 
Sbjct: 363  VTKVPRFAFEKFPAADSHLTTQMKSVGEVMAMGRTFQESFQKALRGLEVGVDG-----LD 417

Query: 501  ELDWDWEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQF 560
            E   D +++   +    PDR+  +  A + GM ++E+   + ID WFL Q ++++  E  
Sbjct: 418  EKSTDRDEVIEEIGEAGPDRIWYVGDAFRLGMSLEEVQSETDIDPWFLAQIEDIVKTEGL 477

Query: 561  LLTQSVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAE 620
            +  +++ +++  +   +K++GFSD+++A   K+  K VR  R++  V P YKRVDTCAAE
Sbjct: 478  VRNRTLESLSTAELRHLKQKGFSDRRLAKLLKTDAKAVRLARVAQNVRPVYKRVDTCAAE 537

Query: 621  FEANTPYMYSSYDF---ECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAG 677
            F  NT YMY +Y+    ECE+ PT  KK+++LGGGPNRIGQGIEFDYCC H + +L+  G
Sbjct: 538  FATNTAYMYGTYEAEHGECEADPTSNKKIMVLGGGPNRIGQGIEFDYCCVHAALALREDG 597

Query: 678  YETIMMNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLP 737
            YETIM+N NPETVSTDYDTSDRLYFEPLT+EDVL ++D E+P G+IVQ+GGQTPLKL+L 
Sbjct: 598  YETIMVNCNPETVSTDYDTSDRLYFEPLTLEDVLEIVDKEKPVGVIVQYGGQTPLKLALD 657

Query: 738  IHQYLDEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEAD 797
            +           A+G   V I GTSPD IDAAEDRERF  ++++L + QP    A++E +
Sbjct: 658  LE----------ANG---VPIIGTSPDMIDAAEDRERFQKLLQDLGLRQPPNRTARAEDE 704

Query: 798  ALAIAKEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAI 857
            AL +A+EIGYP+VVRPSYVLGGRAMEIV+    L  Y+  AV+V  + PVL+D++L+DAI
Sbjct: 705  ALRLAEEIGYPLVVRPSYVLGGRAMEIVHEPRDLERYMREAVKVSNDSPVLLDRFLNDAI 764

Query: 858  EIDVDALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKR 917
            E DVDAL D    V IGG+MEHIEQAGVHSGDSAC +P  ++S + +D +   T  +AK 
Sbjct: 765  ECDVDALCDGT-RVFIGGVMEHIEQAGVHSGDSACSLPPYSLSQATVDELKRQTAAMAKA 823

Query: 918  LNVCGLMNCQYAITTSGD---VYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLN 974
            LNV GLMN Q+AI        VY+LE NPRASRTVP+VSKA G  LAK AA  M+G+SL+
Sbjct: 824  LNVVGLMNVQFAIQQRNGEDIVYVLEVNPRASRTVPYVSKATGLSLAKIAARCMAGQSLD 883

Query: 975  DLGFTKEVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAA 1034
              G  +EV+P + SVKEAV PF KF G D +LGPEMRSTGEVMG+   F  A  K+Q+AA
Sbjct: 884  SQGIGEEVVPPYYSVKEAVFPFNKFPGVDPVLGPEMRSTGEVMGVGKVFGEALFKSQLAA 943

Query: 1035 GQKLPLSGTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMH 1094
            G +LP  GTV +++ D  KP    +A+   D+G+ IV+T GTA  +E  GI V  V K+ 
Sbjct: 944  GSRLPEKGTVLITVKDSDKPRAVTVARMLHDLGYPIVATRGTASAIEAAGIPVRVVNKVK 1003

Query: 1095 EGRPHAGDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAI 1154
            +GRPH  DM+ NG++ ++  T         D   +R   LA +VP  TT++GA A  E +
Sbjct: 1004 DGRPHIVDMIKNGELALVFTTVDETRTAIADSRSIRIAALAARVPYYTTIAGANAAVEGL 1063

Query: 1155 RSLKS 1159
            + +++
Sbjct: 1064 KHMQN 1068


>gi|32477331|ref|NP_870325.1| carbamoyl-phosphate synthase (glutamine-hydrolyzing) large chain
            [Rhodopirellula baltica SH 1]
 gi|81835273|sp|Q7UJ58.1|CARB_RHOBA RecName: Full=Carbamoyl-phosphate synthase large chain; AltName:
            Full=Carbamoyl-phosphate synthetase ammonia chain
 gi|32447882|emb|CAD77400.1| carbamoyl-phosphate synthase (glutamine-hydrolyzing) large chain
            [Rhodopirellula baltica SH 1]
          Length = 1083

 Score = 1234 bits (3192), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 630/1092 (57%), Positives = 797/1092 (72%), Gaps = 29/1092 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            +R D++KIL++G+GPIVIGQACEFDYSGTQACKAL+EEGYEV+L+NSNPATIMTDP  AD
Sbjct: 3    RRDDIKKILLIGSGPIVIGQACEFDYSGTQACKALREEGYEVVLVNSNPATIMTDPATAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+T ++VE+V+ KERPDALLPT+GGQT LN+A+ L  +G LEKYGVE+I A    
Sbjct: 63   ATYIEPLTWQIVEKVIAKERPDALLPTLGGQTGLNVAMDLDANGVLEKYGVEMIAANAKV 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAE+R+ FKQAM  IG+         TL +      E+G  P ++RP+FT+GG+G  I
Sbjct: 123  IAKAEEREQFKQAMDKIGLDVCKGFTVRTLADARKALAEVG-LPAVVRPSFTMGGSGSAI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYNK++F+++ + GL  S  ++VL+E+S++GWKEYE+EVMRD  DNVVIIC+IEN DPMG
Sbjct: 182  AYNKDDFDSLVQNGLDQSPVTEVLIEESIIGWKEYEMEVMRDCDDNVVIICAIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTL+DKEYQR+RD S+A+IREIGVE GGSN+QFA+ P  G ++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLSDKEYQRMRDASLAVIREIGVETGGSNIQFAIEPDTGRMIVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRF 447
            PRVSRSSALASKATGFPIAK+AAKL+VGY L ++PNDIT+KT A FEP+IDYVVTK+PRF
Sbjct: 302  PRVSRSSALASKATGFPIAKIAAKLAVGYRLWELPNDITQKTKACFEPTIDYVVTKMPRF 361

Query: 448  AFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDWE 507
            AFEKFP ++  LTTQMKSVGE M++GRTFQESFQKALR LE G  G+G S+ K+L W  E
Sbjct: 362  AFEKFPEADATLTTQMKSVGETMSIGRTFQESFQKALRGLEVGAFGFG-SDPKDL-WGTE 419

Query: 508  ------QLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFL 561
                  +++  L  P  +R+  I  A K GM   EIH L+ ID WFL   ++LI+ E  L
Sbjct: 420  DQPSRDEIRAKLSTPGSERVFYIRYAFKDGMTAAEIHSLTNIDPWFLDHLQQLIETEDNL 479

Query: 562  LT-QSVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAE 620
                 +  +  D   + KRRGFSD+QIA  T  TE +VR KRL +G+ P YK VDTCAAE
Sbjct: 480  RAIGKLDAIDVDTMRDAKRRGFSDRQIATITSKTESQVRAKRLEMGIRPVYKSVDTCAAE 539

Query: 621  FEANTPYMYSSYDFECE-SAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYE 679
            FEA TPY YS+Y+ E E  A   KK+V+ILGGGPNRIGQGIEFDYCCCH SF+LQ  G E
Sbjct: 540  FEAFTPYYYSTYESETEVPAKGDKKRVVILGGGPNRIGQGIEFDYCCCHASFALQEMGIE 599

Query: 680  TIMMNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIH 739
            +IM+NSNPETVSTDYDTSD L+FEPLT+EDVLN+ D  +P+G+IVQFGGQTPL L+  + 
Sbjct: 600  SIMVNSNPETVSTDYDTSDILFFEPLTIEDVLNICDAMQPDGVIVQFGGQTPLNLARGLE 659

Query: 740  QYLDEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADAL 799
            Q               V I GTS D+ID AEDRE F+++I EL + QP  GIA++  +A 
Sbjct: 660  Q-------------AGVPIIGTSVDTIDTAEDRELFSSLIDELGLRQPPSGIARNMDEAR 706

Query: 800  AIAKEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEI 859
              AK IGYP +VRPS+VLGGRAMEI Y       Y+  A  V   +PVLID++L DA E+
Sbjct: 707  VEAKRIGYPALVRPSFVLGGRAMEICYDHSQFARYVAEAFIVADGQPVLIDRFLEDATEV 766

Query: 860  DVDALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLN 919
            DVDA++D   + VI GIMEHIE+AGVHSGDSAC IP  +++   L  I   T KLA RLN
Sbjct: 767  DVDAISDG-NDCVIMGIMEHIEEAGVHSGDSACCIPPFSLTQPVLAEIRDATRKLAARLN 825

Query: 920  VCGLMNCQYAITTSG---DVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDL 976
            V GLMN Q+A+   G    +Y+LE NPRASRTVPFV+KA G P+A  A  VM+GK+L +L
Sbjct: 826  VVGLMNIQFAVKMEGTQPTLYILEVNPRASRTVPFVAKATGVPVANLATKVMAGKTLKEL 885

Query: 977  GFTKEVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQ 1036
              T+E IP+HVS+KE+VLPF KF G D++LGPEMRSTGEVMG+   F IAFAK+Q+AAG 
Sbjct: 886  NVTEEPIPRHVSIKESVLPFRKFAGVDIVLGPEMRSTGEVMGVSELFSIAFAKSQLAAGT 945

Query: 1037 KLPLSGTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEG 1096
             LP SG +FLSL+   K   E + K+ +++GF++++T GTA  LE  GIAV RV K+ EG
Sbjct: 946  VLPESGKIFLSLSANHKEAAESLGKSLIELGFELLATEGTAVRLEANGIAVTRVKKLSEG 1005

Query: 1097 RPHAGDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRS 1156
             P+  D + N  +Q+++ T SG      +G K+R  G+ + VP ITT++ A A   A+ +
Sbjct: 1006 HPNLIDYLKNDDVQLILNTPSGKGARTDEG-KIRAAGVQHGVPCITTLAAAEAAVRAMVA 1064

Query: 1157 LKSNTVTMTALQ 1168
            ++   + + +LQ
Sbjct: 1065 MRDTPMEVESLQ 1076


>gi|17546240|ref|NP_519642.1| carbamoyl phosphate synthase large subunit [Ralstonia solanacearum
            GMI1000]
 gi|22095509|sp|Q8XZ83.1|CARB_RALSO RecName: Full=Carbamoyl-phosphate synthase large chain; AltName:
            Full=Carbamoyl-phosphate synthetase ammonia chain
 gi|17428537|emb|CAD15223.1| probable carbamoyl-phosphate synthase large chain
            (carbamoyl-phosphate synthetase ammonia chain) protein
            [Ralstonia solanacearum GMI1000]
          Length = 1081

 Score = 1234 bits (3192), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 620/1085 (57%), Positives = 808/1085 (74%), Gaps = 32/1085 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILI+GAGPI+IGQACEFDYSG QACKAL+EEG++V+L+NSNPATIMTDP  AD
Sbjct: 3    KRTDIKTILIIGAGPIIIGQACEFDYSGAQACKALREEGFKVVLVNSNPATIMTDPSTAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+T E+VE+++ KERPDA+LPTMGGQTALN A+ L   G LEKY VELIGA  +A
Sbjct: 63   VTYIEPITWEVVERIIAKERPDAILPTMGGQTALNCALDLHRHGVLEKYNVELIGASPEA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEI------GEFPLIIRPAFTLG 261
            I KAEDR  FK+AM  IG+ +  SGI ++L+E +++  +I      G +P++IRP+FTLG
Sbjct: 123  IDKAEDRQKFKEAMTKIGLGSAKSGIAHSLEEALAVQAQIARETSSGGYPIVIRPSFTLG 182

Query: 262  GTGGGIAYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIE 321
            GTGGGIAYN+EEFE ICK GL  S T+++L+E+SLLGWKEYE+EV+RD  DN +I+CSIE
Sbjct: 183  GTGGGIAYNREEFEDICKRGLDLSPTNELLIEESLLGWKEYEMEVVRDKKDNCIIVCSIE 242

Query: 322  NVDPMGVHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEV 381
            N+DPMG+HTGDSITVAPAQTLTDKEYQ LR+ S+A++REIGV+ GGSNVQF++NP DG +
Sbjct: 243  NLDPMGIHTGDSITVAPAQTLTDKEYQILRNASLAVLREIGVDTGGSNVQFSINPEDGRM 302

Query: 382  MVIEMNPRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYV 440
            +VIEMNPRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ N+IT   TPASFEPSIDYV
Sbjct: 303  IVIEMNPRVSRSSALASKATGFPIAKVAAKLAVGYTLDELKNEITGGATPASFEPSIDYV 362

Query: 441  VTKIPRFAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVK 500
            VTK+PRFAFEKFP ++  LTTQMKSVGE MA+GRTFQESFQKALR LE G  G     + 
Sbjct: 363  VTKVPRFAFEKFPQADSHLTTQMKSVGEVMAMGRTFQESFQKALRGLEVGVDG-----LD 417

Query: 501  ELDWDWEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQF 560
            E   D +++   +  P PDR+  +  A + G+ +DE++  + +D WFL Q ++++  E  
Sbjct: 418  EKSSDRDEIIAEIGEPGPDRIWYLGDAFRLGLSIDEVYAETAVDPWFLAQIEDIVRTEAL 477

Query: 561  LLTQSVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAE 620
            +  +++ +++  +   +K++GFSD+++A   K+T + VREKR++  V P YKRVDTCAAE
Sbjct: 478  VKARTLDSLSAAELRLLKQKGFSDRRLATLMKTTAQAVREKRIAEKVRPVYKRVDTCAAE 537

Query: 621  FEANTPYMYSSYDF---ECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAG 677
            F  NT Y+YS+Y+    ECE+ PT++KK+++LGGGPNRIGQGIEFDYCC H + +L+  G
Sbjct: 538  FATNTAYLYSTYEAEHGECEADPTERKKIMVLGGGPNRIGQGIEFDYCCVHAALALREDG 597

Query: 678  YETIMMNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLP 737
            YETIM+N NPETVSTDYDTSDRLYFEP+T+EDVL ++D E+P G+IVQ+GGQTPLKL+L 
Sbjct: 598  YETIMVNCNPETVSTDYDTSDRLYFEPVTLEDVLEIVDKEKPVGVIVQYGGQTPLKLALD 657

Query: 738  IHQYLDEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEAD 797
            +           A+G   V I GT+PD IDAAEDRERF  ++ +L + QP    A++E +
Sbjct: 658  LE----------ANG---VPIIGTTPDMIDAAEDRERFQKLLHDLGLRQPPNRTARAEDE 704

Query: 798  ALAIAKEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAI 857
            AL +A EIGYP+VVRPSYVLGGRAMEIV+    L  Y+  AV+V  + PVL+D++L+DAI
Sbjct: 705  ALKLADEIGYPLVVRPSYVLGGRAMEIVHEPRDLERYMREAVKVSNDSPVLLDRFLNDAI 764

Query: 858  EIDVDALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKR 917
            E DVD L+D    V IGG+MEHIEQAGVHSGDSAC +P  ++S + +D +   T  +A+ 
Sbjct: 765  ECDVDCLSDG-KRVFIGGVMEHIEQAGVHSGDSACSLPPYSLSQATVDELKRQTAAMARA 823

Query: 918  LNVCGLMNCQYAITTSGD---VYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLN 974
            LNV GLMN Q+AI   G    VY+LE NPRASRTVP+VSKA G  LAK AA  M+G+SL+
Sbjct: 824  LNVIGLMNVQFAIQQKGGEDIVYVLEVNPRASRTVPYVSKATGISLAKVAARCMAGQSLD 883

Query: 975  DLGFTKEVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAA 1034
            + G   EV+P + SVKEAV PF KF G D +LGPEMRSTGEVMG+  +F  A  K+Q+AA
Sbjct: 884  EQGIHDEVVPSYYSVKEAVFPFNKFPGVDPVLGPEMRSTGEVMGVGRTFGEALFKSQLAA 943

Query: 1035 GQKLPLSGTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMH 1094
            G +LP  GTV +++ D  KP    +A+    +G+ IV+T GTA  +E  GI V  V K+ 
Sbjct: 944  GSRLPEKGTVLMTVKDSDKPRAIEVARTLHTLGYPIVATRGTASAIEAAGIPVRVVNKVK 1003

Query: 1095 EGRPHAGDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAI 1154
            +GRPH  DM+ NG++ ++  T         D   +R   LA +V   TT++GA A  E +
Sbjct: 1004 DGRPHIVDMIKNGELALVFTTVDETRAAIADSRSIRTAALANRVTYYTTIAGARAAVEGL 1063

Query: 1155 RSLKS 1159
            + L++
Sbjct: 1064 KHLQN 1068


>gi|114798818|ref|YP_759373.1| carbamoyl-phosphate synthase large subunit [Hyphomonas neptunium ATCC
            15444]
 gi|114738992|gb|ABI77117.1| carbamoyl-phosphate synthase, large subunit [Hyphomonas neptunium
            ATCC 15444]
          Length = 1092

 Score = 1234 bits (3192), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 629/1116 (56%), Positives = 808/1116 (72%), Gaps = 63/1116 (5%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD+  IL++GAGPI+IGQACEFDYSG QA KALK EGY VIL+NSNPATIMTDP LAD
Sbjct: 3    KRTDISSILVIGAGPIIIGQACEFDYSGVQAVKALKAEGYRVILVNSNPATIMTDPELAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+ PE+VE+++  ERPDALLPTMGGQTALN A+ L  +G LEKYGVELIGAK +A
Sbjct: 63   ATYIEPILPEVVEKIIAAERPDALLPTMGGQTALNCALDLHYAGILEKYGVELIGAKAEA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNT------------------LDECISIANEIGE 249
            I+ AEDR LF++AM  +G++ P + I  +                  L + +     +G 
Sbjct: 123  IEMAEDRKLFREAMDRLGLENPRAAIIASPEIRGEDGKIKSYDRITGLRQAMDALETVG- 181

Query: 250  FPLIIRPAFTLGGTGGGIAYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRD 309
             P IIRPAFTLGGTGGGIAYN EE+E IC++GLAAS  +Q+L+++SLLGWKEYE+EV+RD
Sbjct: 182  LPAIIRPAFTLGGTGGGIAYNVEEYEEICRSGLAASPNAQILIDESLLGWKEYEMEVVRD 241

Query: 310  LADNVVIICSIENVDPMGVHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSN 369
             ADN +IICSIEN+DPMGVHTGDSITVAPA TLTDKEYQ +R+ SIA++REIGVE GGSN
Sbjct: 242  TADNCIIICSIENIDPMGVHTGDSITVAPALTLTDKEYQVMRNASIAVLREIGVETGGSN 301

Query: 370  VQFAVNPVDGEVMVIEMNPRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKT 429
            VQFAVNP DG ++VIEMNPRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT  T
Sbjct: 302  VQFAVNPKDGRLIVIEMNPRVSRSSALASKATGFPIAKIAAKLAVGYTLDELDNDITGVT 361

Query: 430  PASFEPSIDYVVTKIPRFAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLEC 489
            PASFEP+IDYVVTKIPRFAFEK+ G+EP+LTT MKSVGEAMA+GR+FQES QKAL SLE 
Sbjct: 362  PASFEPTIDYVVTKIPRFAFEKYKGAEPILTTAMKSVGEAMAIGRSFQESLQKALCSLET 421

Query: 490  GFSGWGCSNVKELDWDWEQ-LKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFL 548
            G SG     + EL ++ E  L+ +L + +PDR++ I  A + G+ V+++  ++  D WFL
Sbjct: 422  GLSG-----LNELPFENESALRQALGIQSPDRLRVIAQAFRMGLSVEDVQAVTSFDPWFL 476

Query: 549  TQFKELIDVEQFLLTQ----SVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLS 604
             Q +E++  E  +L      ++++MT     E+K  GFSDK++A  T +TE  VR  R +
Sbjct: 477  RQIEEIVKTEALILANGLPGNLASMT-----EIKAMGFSDKRLAELTGNTEDGVRAHRHA 531

Query: 605  LGVIPSYKRVDTCAAEFEANTPYMYSSYDF--------ECESAPTQKKKVLILGGGPNRI 656
            LGV P YKR+DTCAAEF A TPY+YS+Y+         ECE+ P+ +KK +ILGGGPNRI
Sbjct: 532  LGVRPVYKRIDTCAAEFAAKTPYLYSTYEHAPFGQAAAECEAGPSSRKKAIILGGGPNRI 591

Query: 657  GQGIEFDYCCCHTSFSLQSAGYETIMMNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDL 716
            GQGIEFDYCCCH +F+++  G E+IM+N NPETVSTDYDTSDRLYFEPLT+E VL +I +
Sbjct: 592  GQGIEFDYCCCHAAFAMEDLGIESIMVNCNPETVSTDYDTSDRLYFEPLTIEHVLEIIHV 651

Query: 717  ERP----EGIIVQFGGQTPLKLSLPIHQYLDEHRLPSASGDGLVRIWGTSPDSIDAAEDR 772
            E+      G+IVQFGGQTPLKL+ P+     E ++P         I GTSP SID AEDR
Sbjct: 652  EQSAGELAGVIVQFGGQTPLKLAGPLF----EEQVP---------ILGTSPASIDLAEDR 698

Query: 773  ERFNAIIKELSIEQPKGGIAKSEADALAIAKEIGYPVVVRPSYVLGGRAMEIVYTDETLV 832
            E+F A++ +L I+Q    +A+S  +A   A EIGYPV++RPS+VLGGRAMEI   DE L 
Sbjct: 699  EQFAALLDKLGIQQAPSRVARSVEEAEVKANEIGYPVMLRPSFVLGGRAMEIARNDEDLR 758

Query: 833  TYLENAVEVDPERPVLIDKYLSDAIEIDVDALADSCGNVVIGGIMEHIEQAGVHSGDSAC 892
             +   A+ V  +  + ID+YLSDAIE+DVDA+ D    V + GIMEHIE+AGVHSGDSAC
Sbjct: 759  KFAAEALRVSGDASLFIDRYLSDAIEVDVDAICDG-KTVHVAGIMEHIEEAGVHSGDSAC 817

Query: 893  MIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNCQYAITTSGDVYLLEANPRASRTVPFV 952
             +P  T+S      +     +LA  LNV GL+N Q+A+    ++Y+LEANPRASRTVPFV
Sbjct: 818  ALPPFTLSQDLQKRLGEQAAQLAMALNVRGLINIQFAVKGE-EIYVLEANPRASRTVPFV 876

Query: 953  SKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRS 1012
            +KA+G P+A  AA VM+G++L+    +    P+ +++KEAV PF +F G D  LGPEMRS
Sbjct: 877  AKAVGAPIAAIAAKVMAGEALSSFDLSN-ARPRRIAIKEAVFPFARFPGVDPQLGPEMRS 935

Query: 1013 TGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVFLSLNDLTKPHLERIAKAFLDIGFKIVS 1072
            TGEVMG D  F +AF K+Q+  G +LP  GTVF+S+ D  K   E  A+  ++ GF I++
Sbjct: 936  TGEVMGWDDDFGMAFLKSQLGGGIRLPAEGTVFISVRDSDKKGAEEAARGLVEQGFTILA 995

Query: 1073 TSGTAHFLELKGIAVERVLKMHEGRPHAGDMVANGQIQMMVITSSGDSLDQIDGLKLRRR 1132
            TSGTA  LE KGI V+RV K+ EG+PH  D + NG +Q++  T+ G +    D   +RR 
Sbjct: 996  TSGTATHLESKGIPVKRVNKVLEGQPHIVDAMINGDVQLVFNTTEG-AASLSDSGSIRRT 1054

Query: 1133 GLAYKVPVITTVSGALANAEAIRSLKSNTVTMTALQ 1168
             +A K+P  TT++ +LA  +AI S+KS  +++ ALQ
Sbjct: 1055 AVARKIPYFTTLAASLAAVKAIASMKSQEISVRALQ 1090


>gi|302344544|ref|YP_003809073.1| carbamoyl-phosphate synthase large subunit [Desulfarculus baarsii DSM
            2075]
 gi|301641157|gb|ADK86479.1| carbamoyl-phosphate synthase, large subunit [Desulfarculus baarsii
            DSM 2075]
          Length = 1084

 Score = 1234 bits (3192), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 640/1097 (58%), Positives = 813/1097 (74%), Gaps = 32/1097 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KR DL+KI+I+G+GPI+I QACEFDYSGTQA KA+KEEG +V+L+NSNPATIMTDP LAD
Sbjct: 3    KREDLKKIMIIGSGPIIISQACEFDYSGTQAVKAIKEEGIQVVLVNSNPATIMTDPELAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
            RTY+ P+T E V +VL +ERPDALLPT+GGQTALN A+ +A++G LE+ GVE+IGA    
Sbjct: 63   RTYVEPITCEFVCEVLRRERPDALLPTLGGQTALNTALEVAQTGILEELGVEMIGATPAV 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I+KAE R  F++AM+ IG++ P S I   LD+    A E+G FPL++RPAFTLGGTGGG+
Sbjct: 123  IRKAESRQEFREAMEKIGLRVPGSVICRNLDDVRRAAEELG-FPLVVRPAFTLGGTGGGV 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN +E     + GL+ASLTS+V++E+S+LGWKE+ELEVMRD  DNVVIICSIEN+DPMG
Sbjct: 182  AYNIDELLETSRYGLSASLTSEVMIEESVLGWKEFELEVMRDRKDNVVIICSIENLDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTD+EYQ +RD SIAI+REIGVE GGSNVQFA+NP +GE++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDREYQMMRDASIAIMREIGVETGGSNVQFAINPKNGEMVVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRF 447
            PRVSRSSALASKATGFPIAKMAAKL++GY+LD++PNDIT++T ASFEP+IDY V KIPR+
Sbjct: 302  PRVSRSSALASKATGFPIAKMAAKLAIGYTLDELPNDITRETMASFEPTIDYAVVKIPRW 361

Query: 448  AFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDWE 507
            AFEKFPGS+ +LTT MKSVGE MA+GRTF+E+ QK LR LE G +G           D +
Sbjct: 362  AFEKFPGSQDVLTTAMKSVGETMAIGRTFKEALQKGLRGLEIGRAGLIGDGADFSGHDQQ 421

Query: 508  QLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFL------ 561
             L+ +L  PN  R+  +  A+K GM ++EIH++++ID WFL   K+L++  Q L      
Sbjct: 422  TLRQNLATPNSQRIFWVAQAIKGGMSLEEIHQITWIDPWFLHNIKQLVEFSQELDAKRPW 481

Query: 562  --LTQSVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAA 619
              L  ++  +  D     K  GFSD+Q+A AT ++E +VR +RL+LGV  +YK VDTCAA
Sbjct: 482  GSLVCTLDGLDADFLRRAKEWGFSDRQLAQATGASEDDVRRRRLALGVRHTYKLVDTCAA 541

Query: 620  EFEANTPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYE 679
            EFEA TPY YS+Y+ E E   ++++KV+ILGGGPNRIGQGIEFDYCC H SF+L+  G E
Sbjct: 542  EFEAYTPYFYSTYETEDECRASERRKVMILGGGPNRIGQGIEFDYCCVHASFALREMGVE 601

Query: 680  TIMMNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIH 739
            +IM+NSNPETVSTDYDTSD+LYFEPLT EDVLN+ID ERP+G+IVQFGGQTPL L++P  
Sbjct: 602  SIMVNSNPETVSTDYDTSDKLYFEPLTKEDVLNIIDSERPDGVIVQFGGQTPLNLAVP-- 659

Query: 740  QYLDEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADAL 799
              L+    P         I GT PD+ID AEDR+RF  +++ L + QP  G A +  +A+
Sbjct: 660  --LERAGAP---------ILGTPPDAIDRAEDRDRFCELLRLLRLRQPDNGTATNVEEAV 708

Query: 800  AIAKEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEI 859
             IA++IGYPVVVRPSYVLGGRAMEIV+  + L  Y+  AV+  P+ P+L+DK+L DAIE+
Sbjct: 709  RIAEKIGYPVVVRPSYVLGGRAMEIVHDRQALEHYMATAVKASPDHPILVDKFLEDAIEV 768

Query: 860  DVDALADS--CGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKR 917
            DVDA+ D   C   V+ GIMEHIEQAGVHSGDSAC++P  T+  + +D I   T  LA  
Sbjct: 769  DVDAVCDGELC---VVAGIMEHIEQAGVHSGDSACVLPPHTLGPAMIDEIRQATHALAFE 825

Query: 918  LNVCGLMNCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLG 977
            L V GLMN Q+AI   G +YLLE NPRASRTVPFVSKA G P AK A  VM+G SL + G
Sbjct: 826  LGVRGLMNIQFAI-QGGLLYLLEVNPRASRTVPFVSKATGVPWAKVATKVMAGLSLREQG 884

Query: 978  FTKEVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQK 1037
             T+EVIP H SVKEAV PF +F G D +LGPEMRSTGEVMGID +  +AFAK+QIAAGQ+
Sbjct: 885  VTEEVIPSHYSVKEAVFPFVRFPGVDPVLGPEMRSTGEVMGIDKTVGLAFAKSQIAAGQR 944

Query: 1038 LPLSGTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGR 1097
            LP  G VF+S+    K H+  +A+ F ++GF+IV+T+GT  +    G+    V K+ E R
Sbjct: 945  LPTEGQVFISVRQSDKSHVLPVARKFHELGFQIVATAGTNEYFNQNGVPSSLVFKVSESR 1004

Query: 1098 PHAGDMVANGQIQMMVITSSGDSLDQI--DGLKLRRRGLAYKVPVITTVSGALANAEAIR 1155
            PH  D + +GQI  +VI + GD       D   +RR  +   +  ITT++ A A  EA+ 
Sbjct: 1005 PHVVDAMKSGQI-ALVINTGGDKAKGTYNDAYMIRRTAVERGIAYITTMAAATATVEAVE 1063

Query: 1156 SLK-SNTVTMTALQDFF 1171
            +LK S  + +T LQD++
Sbjct: 1064 ALKTSGRLGVTPLQDYY 1080


>gi|347758344|ref|YP_004865906.1| carbamoyl-phosphate synthase large subunit [Micavibrio
            aeruginosavorus ARL-13]
 gi|347590862|gb|AEP09904.1| carbamoyl-phosphate synthase, large subunit [Micavibrio
            aeruginosavorus ARL-13]
          Length = 1109

 Score = 1233 bits (3191), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 630/1108 (56%), Positives = 800/1108 (72%), Gaps = 42/1108 (3%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KR D++ I I+GAGPIVIGQACEFDYSGTQACKAL+EEGY+VILINSNPATIMTDP +AD
Sbjct: 3    KRHDIQSICIIGAGPIVIGQACEFDYSGTQACKALREEGYKVILINSNPATIMTDPNMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+TPE+V ++LEKERP ALLPTMGGQTALN A+AL  +G L+  GVELIGA+ D 
Sbjct: 63   VTYIEPITPEIVAKILEKERPHALLPTMGGQTALNTALALHANGTLDALGVELIGARADV 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I +AEDRDLF+Q M  +G+++P S     L E I     IG  P IIRP+FTLGGTGGGI
Sbjct: 123  IARAEDRDLFRQCMDQLGLESPKSITVTNLFEAIDALPHIG-LPCIIRPSFTLGGTGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEFE I + GL AS   QVLVE+S+LGWKEYE+EV+RD  DN +I+CSIEN+DPMG
Sbjct: 182  AYNREEFETIVREGLDASPVRQVLVEESVLGWKEYEMEVVRDRNDNCIIVCSIENIDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPA TLTDKEYQR+RD SIA++R IGVE GGSNVQFAVNP DG ++VIEMN
Sbjct: 242  VHTGDSITVAPALTLTDKEYQRMRDASIAVLRGIGVETGGSNVQFAVNPEDGRMVVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKK-TPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT   TPASFEP+IDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKIAAKLAVGYTLDELQNDITGGLTPASFEPTIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            FAFEKF G+  +LTT MKSVGE MA GR+F+ES QKALRSLE G +G+    + E D   
Sbjct: 362  FAFEKFRGTTNILTTSMKSVGEVMAFGRSFEESIQKALRSLEKGLTGFDEVVIGEGDGQH 421

Query: 507  ---EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLT 563
               + ++ ++  P P R+  I  AM+ GM VDEIH+++  DKWFL +   +I  E  L  
Sbjct: 422  PHPDHVRAAIARPTPQRILYIAQAMRHGMSVDEIHDITKFDKWFLNRIAGIIATENKL-- 479

Query: 564  QSVSNMTKD--DFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEF 621
              V  + +D   +  VK+ GFSD ++A     T   VR  R   G  P +KRVD+CA E 
Sbjct: 480  -RVGGLPRDAAGWIAVKKMGFSDARLAKLMNVTPDMVRTARHKAGATPVFKRVDSCAGEL 538

Query: 622  EANTPYMYSSYD---FECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGY 678
              +T YMYS Y+    E E  PT ++K++ILGGGPNRIGQGIEFDYCC H +++L+ AGY
Sbjct: 539  PTSTAYMYSCYENVGAENECNPTDREKIIILGGGPNRIGQGIEFDYCCVHAAYALKEAGY 598

Query: 679  ETIMMNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLE----RPEGIIVQFGGQTPLKL 734
            ETIM+N NPETVSTDYDTSDRLYFEPLT EDV+ +I  E    + +G+IVQ GGQTPLKL
Sbjct: 599  ETIMINCNPETVSTDYDTSDRLYFEPLTNEDVVEIIRAEQRKGKVKGVIVQLGGQTPLKL 658

Query: 735  SLPIHQYLDEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKS 794
            +    Q L    +P         I GTSPD+ID AEDR+RF  ++ ++ + QP  G+A+S
Sbjct: 659  A----QALQAADIP---------ILGTSPDAIDLAEDRQRFQKLLHQMKLRQPPNGLARS 705

Query: 795  EADALAIAKEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLS 854
            E  A+ +A+E+G+P+V+RPSYVLGG+ MEIV++ + L  Y++ AV+V  + PVL+D+YL 
Sbjct: 706  EEQAIKMAEELGFPLVIRPSYVLGGQGMEIVHSMDELKRYIKTAVQVSGDTPVLLDRYLR 765

Query: 855  DAIEIDVDALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKL 914
             AIEIDVDAL D    V + GIMEHIE+AG+HSGDSAC++P  ++    +  I   TI+L
Sbjct: 766  SAIEIDVDALCDGT-EVAVVGIMEHIEEAGIHSGDSACVLPPHSLPYKTVKEIEKQTIRL 824

Query: 915  AKRLNVCGLMNCQYAI-----TTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMS 969
            AK L V GLMN Q+A+     T   D+++LE NPRASRTVPFV+KA G P+AK AA +M+
Sbjct: 825  AKALKVKGLMNVQFAVKKNRDTGEHDIFILEVNPRASRTVPFVAKATGVPVAKIAARLMA 884

Query: 970  GKSLNDLGFTKEVI---PKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIA 1026
            G+ L+   FT ++     +H +VK  V PF +F G D +LGPEM+STGEVMGID    +A
Sbjct: 885  GEMLDV--FTTQLRGMDQEHTAVKAPVFPFSRFPGVDPILGPEMKSTGEVMGIDRDVAVA 942

Query: 1027 FAKAQIAAGQKLPLSGTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIA 1086
            FAK+QIAAG  LPL GTVFLS+ D  K  L  IA+  +D+GF +V+T GT  FL+ +G+ 
Sbjct: 943  FAKSQIAAGTHLPLEGTVFLSVKDSDKEALVPIAQDLVDMGFNLVATGGTCVFLKAQGLP 1002

Query: 1087 VERVLKMHEGRPHAGDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSG 1146
            V R+ K+ EG+PH  D + NGQIQ M+ T+ G      D   +RR+ L Y++P  T +S 
Sbjct: 1003 VTRINKVMEGQPHIVDAIINGQIQFMINTTKGPQA-VTDATSIRRQALTYRIPYYTLLSA 1061

Query: 1147 ALANAEAIRSLKSNTVTMTALQDFFDVE 1174
            A A   AIR+L++  + + ++Q +F V+
Sbjct: 1062 ARAGTMAIRALRAKPLEVASIQSYFGVD 1089


>gi|359683865|ref|ZP_09253866.1| carbamoyl phosphate synthase large subunit [Leptospira santarosai
            str. 2000030832]
          Length = 1097

 Score = 1233 bits (3191), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 633/1112 (56%), Positives = 799/1112 (71%), Gaps = 58/1112 (5%)

Query: 95   ILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLADRTYITPM 154
            +LILG+GPIVIGQACEFDYSGTQA KALKE+G  V+L+NSNPATIMTDP LAD TY+ PM
Sbjct: 1    MLILGSGPIVIGQACEFDYSGTQAAKALKEKGIRVVLLNSNPATIMTDPDLADATYVEPM 60

Query: 155  TPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDAIKKAEDR 214
            T  +V+++LEKE+PDA+LPT+GGQTALNLA+A   +G LEKY VELIGAK+DAIKKAEDR
Sbjct: 61   TVPVVQKILEKEKPDAILPTVGGQTALNLALACNSAGLLEKYNVELIGAKVDAIKKAEDR 120

Query: 215  DLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGIAYNKEEF 274
            +LFK+AM+ IGV+ P SG+ N L + + I  ++G  PLI+RPAFTLGGTGGGIAY +E F
Sbjct: 121  ELFKKAMEKIGVRVPASGLANNLTDAVEIKKKLG-LPLIVRPAFTLGGTGGGIAYTEETF 179

Query: 275  EAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMGVHTGDSI 334
            E     GL AS  SQVL+E+S+LGWKE+ELEVMRDLADNVVIICSIEN+DPMGVHTGDSI
Sbjct: 180  EETVSKGLKASPISQVLLEESVLGWKEFELEVMRDLADNVVIICSIENLDPMGVHTGDSI 239

Query: 335  TVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMNPRVSRSS 394
            TVAP QTL+DKEYQ LRD SIAIIREIGVE GGSN+QFAVNP +G+V+VIEMNPRVSRSS
Sbjct: 240  TVAPQQTLSDKEYQNLRDMSIAIIREIGVETGGSNIQFAVNPENGDVIVIEMNPRVSRSS 299

Query: 395  ALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRFAFEKFPG 454
            ALASKATGFPIAK+AA LS+GY+LD+I NDIT+ TPASFEPSIDYVVTK+PRFAFEKFPG
Sbjct: 300  ALASKATGFPIAKIAALLSIGYTLDEIKNDITRVTPASFEPSIDYVVTKVPRFAFEKFPG 359

Query: 455  SEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSN-VKEL--------DWD 505
            ++  L  QMK+VGEAMA+GRTF+ESFQKALRSLE    G+G     +EL        D  
Sbjct: 360  TDDTLGVQMKAVGEAMAIGRTFKESFQKALRSLEIDRYGFGSDGYFQELLYARSLNSDQR 419

Query: 506  WEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQS 565
             E +   L+ PN  R+  I  A  +G  VD+IH+L  +D+WFL Q ++L+ +E     + 
Sbjct: 420  KEWIDSFLKRPNDKRIFYIKLAFDEGYTVDQIHDLCKVDRWFLWQMEDLLKLE-----KE 474

Query: 566  VSNMTKDDFYEVKRRGFSDKQIAFAT--------------------------KSTEKEVR 599
             S       +++KR GFS++Q++F                            K +E+E+ 
Sbjct: 475  YSEKGNSVLFKMKRAGFSNRQLSFLKNKKRILNLLDDGLRVDLKKTEIQNLLKKSEEEIE 534

Query: 600  EKRLSLGVIPSYKRVDTCAAEFEANTPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQG 659
             +  S  + P YKR+DTCA EFEA TPY YSSYD E ES  T  K V+ILGGGPNRIGQG
Sbjct: 535  VELGSEKIFPVYKRIDTCAGEFEAYTPYFYSSYDEEDESDVTSTKSVMILGGGPNRIGQG 594

Query: 660  IEFDYCCCHTSFSLQSAGYETIMMNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERP 719
            IEFDYCCC  S++LQ  G E+IM+NSNPETVSTDYDTSDRLYFEPLT+EDVL +   E+P
Sbjct: 595  IEFDYCCCQASYALQDLGVESIMINSNPETVSTDYDTSDRLYFEPLTLEDVLAIYQNEKP 654

Query: 720  EGIIVQFGGQTPLKLSLPIHQYLDEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAII 779
            EG+I+QFGGQTPLKL+  + +           G   V+I GTSPDSID AEDR+RF  ++
Sbjct: 655  EGVIIQFGGQTPLKLAKDLER----------KG---VKILGTSPDSIDRAEDRKRFVEVL 701

Query: 780  KELSIEQPKGGIAKSEADALAIAKEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAV 839
             +L +  P+ GIA S  +A  IA++I YPV+VRPSYVLGGRAM I+  ++ L  Y+E A 
Sbjct: 702  GKLKLHSPESGIATSMEEAREIAQKIKYPVLVRPSYVLGGRAMLIINEEKELDRYMEKAE 761

Query: 840  EVDPERPVLIDKYLSDAIEIDVDALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTI 899
            E+  +RP+LID +L DA+E+DVDAL D   +V I GIMEHIE+AGVHSGDSAC++P +T+
Sbjct: 762  EISKDRPLLIDSFLEDAVEVDVDALCDG-KDVFITGIMEHIEEAGVHSGDSACVLPPQTL 820

Query: 900  SSSCLDTISSWTIKLAKRLNVCGLMNCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHP 959
            S + +D I   T  LA  L V GL+N QYA+     +Y++E NPRASRTVPFVSKA+GHP
Sbjct: 821  SKNMMDEIRKATADLALELQVKGLINIQYAVKNEV-LYIIEVNPRASRTVPFVSKALGHP 879

Query: 960  LAKYAALVMSGKSLNDLGFTKEVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGI 1019
            + KYA  +M G+SL  L   KE+    VSVKE VLPF KF G D +LGPEMRSTGEVMGI
Sbjct: 880  IVKYATRIMMGESLKSLPLPKEMAFSQVSVKEVVLPFNKFPGVDTILGPEMRSTGEVMGI 939

Query: 1020 DMSFPIAFAKAQIAAGQKLPLSGTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHF 1079
              +   AF K+Q  AG +LP  GTVF+S+ND TK  L    +   ++GF +++TSGT  F
Sbjct: 940  ASTAGEAFLKSQYMAGDELPSQGTVFVSINDKTKSELLSYIRDLSELGFNLIATSGTHKF 999

Query: 1080 LELKGIAVERVLKMHEGR-PHAGDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKV 1138
            L   GI   ++ K+++G+ P A D +   +I  ++I +    + + D   +R+  + +KV
Sbjct: 1000 LSDNGILSSKINKVYDGKFPTALDYIRENKIH-LIINTPLSRVTRDDSFTIRQAAIRFKV 1058

Query: 1139 PVITTVSGALANAEAIRSLKSNTVTMTALQDF 1170
            P +TT + A A  + +  +K+   T+ +LQ+ 
Sbjct: 1059 PCLTTSNAAKALIKGMVEMKNKGFTIHSLQEI 1090



 Score =  223 bits (567), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 141/395 (35%), Positives = 219/395 (55%), Gaps = 21/395 (5%)

Query: 90  TDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLADRT 149
           T  + ++ILG GP  IGQ  EFDY   QA  AL++ G E I+INSNP T+ TD   +DR 
Sbjct: 576 TSTKSVMILGGGPNRIGQGIEFDYCCCQASYALQDLGVESIMINSNPETVSTDYDTSDRL 635

Query: 150 YITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDAIK 209
           Y  P+T E V  + + E+P+ ++   GGQT L LA        LE+ GV+++G   D+I 
Sbjct: 636 YFEPLTLEDVLAIYQNEKPEGVIIQFGGQTPLKLA------KDLERKGVKILGTSPDSID 689

Query: 210 KAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGIAY 269
           +AEDR  F + +  + + +P SGI  +++E   IA +I ++P+++RP++ LGG    I  
Sbjct: 690 RAEDRKRFVEVLGKLKLHSPESGIATSMEEAREIAQKI-KYPVLVRPSYVLGGRAMLIIN 748

Query: 270 NKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMGVH 329
            ++E +   +     S    +L++  L    E +++ + D  D V I   +E+++  GVH
Sbjct: 749 EEKELDRYMEKAEEISKDRPLLIDSFLEDAVEVDVDALCDGKD-VFITGIMEHIEEAGVH 807

Query: 330 TGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVM-VIEMNP 388
           +GDS  V P QTL+      +R  +  +  E+ V+ G  N+Q+AV     EV+ +IE+NP
Sbjct: 808 SGDSACVLPPQTLSKNMMDEIRKATADLALELQVK-GLINIQYAVK---NEVLYIIEVNP 863

Query: 389 RVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRFA 448
           R SR+    SKA G PI K A ++ +G SL  +P     K  A  + S+  VV       
Sbjct: 864 RASRTVPFVSKALGHPIVKYATRIMMGESLKSLP---LPKEMAFSQVSVKEVV-----LP 915

Query: 449 FEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKA 483
           F KFPG + +L  +M+S GE M +  T  E+F K+
Sbjct: 916 FNKFPGVDTILGPEMRSTGEVMGIASTAGEAFLKS 950


>gi|430805041|ref|ZP_19432156.1| carbamoyl phosphate synthase large subunit [Cupriavidus sp. HMR-1]
 gi|429502742|gb|ELA01048.1| carbamoyl phosphate synthase large subunit [Cupriavidus sp. HMR-1]
          Length = 1082

 Score = 1233 bits (3191), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 626/1086 (57%), Positives = 804/1086 (74%), Gaps = 34/1086 (3%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILI+GAGPI+IGQACEFDYSG QACKAL+EEG++VIL+NSNPATIMTDP  AD
Sbjct: 3    KRTDIKSILIIGAGPIIIGQACEFDYSGAQACKALREEGFKVILVNSNPATIMTDPNTAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+T E+VE+++EKERPDA+LPTMGGQTALN A+ L   G L+KY VELIGA  +A
Sbjct: 63   VTYIEPITWEVVERIIEKERPDAILPTMGGQTALNCALDLHRHGVLDKYKVELIGASPEA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGE------FPLIIRPAFTLG 261
            I KAEDR  FK AM  IG+ +  SGI +++DE +++ + I +      +P++IRP+FTLG
Sbjct: 123  IDKAEDRQKFKDAMTKIGLGSAKSGIAHSMDEAVAVQSRIAQETGTAGYPIVIRPSFTLG 182

Query: 262  GTGGGIAYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIE 321
            GTGGGIAYN+EEFE ICK GL  S T ++L+E+SLLGWKEYE+EV+RD ADN +IICSIE
Sbjct: 183  GTGGGIAYNREEFEEICKRGLDLSPTRELLIEESLLGWKEYEMEVVRDKADNCIIICSIE 242

Query: 322  NVDPMGVHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEV 381
            N+DPMG+HTGDSITVAPAQTLTDKEYQ LR+ S+A++REIGV+ GGSNVQF++NP DG +
Sbjct: 243  NLDPMGIHTGDSITVAPAQTLTDKEYQILRNASLAVLREIGVDTGGSNVQFSINPTDGRM 302

Query: 382  MVIEMNPRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYV 440
            +VIEMNPRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ N+IT  +TPASFEPSIDYV
Sbjct: 303  IVIEMNPRVSRSSALASKATGFPIAKVAAKLAVGYTLDELKNEITGGQTPASFEPSIDYV 362

Query: 441  VTKIPRFAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVK 500
            VTK+PRFAFEKFP ++  LTTQMKSVGE MA+GRTFQESFQKALR LE G  G     + 
Sbjct: 363  VTKVPRFAFEKFPAADSHLTTQMKSVGEVMAMGRTFQESFQKALRGLEVGVDG-----LD 417

Query: 501  ELDWDWEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQF 560
            E   D +++   +    PDR+  +  A + GM ++E+   + ID WFL Q ++++  E  
Sbjct: 418  EKSTDRDEVIEEIGEAGPDRIWYVGDAFRLGMSLEEVQSETDIDPWFLAQIEDIVKTEGL 477

Query: 561  LLTQSVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAE 620
            +  +++ +++  +   +K++GFSD+++A   K+  K VR  R++  V P YKRVDTCAAE
Sbjct: 478  VRNRTLESLSTAELRHLKQKGFSDRRLAKLLKTDAKAVRLARVAQNVRPVYKRVDTCAAE 537

Query: 621  FEANTPYMYSSYDF---ECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAG 677
            F  NT YMY +Y+    ECE+ PT  KK+++LGGGPNRIGQGIEFDYCC H + +L+  G
Sbjct: 538  FATNTAYMYGTYEAEHGECEADPTSNKKIMVLGGGPNRIGQGIEFDYCCVHAALALREDG 597

Query: 678  YETIMMNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLP 737
            YETIM+N NPETVSTDYDTSDRLYFEPLT+EDVL ++D E+P G+IVQ+GGQTPLKL+L 
Sbjct: 598  YETIMVNCNPETVSTDYDTSDRLYFEPLTLEDVLEIVDKEKPVGVIVQYGGQTPLKLALD 657

Query: 738  IHQYLDEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEAD 797
            +           A+G   V I GTSPD IDAAEDRERF  +++ L + QP    A++E +
Sbjct: 658  LE----------ANG---VPIIGTSPDMIDAAEDRERFQKLLQNLGLRQPPNRTARAEDE 704

Query: 798  ALAIAKEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAI 857
            AL +A+EIGYP+VVRPSYVLGGRAMEIV+    L  Y+  AV+V  + PVL+D++L+DAI
Sbjct: 705  ALRLAEEIGYPLVVRPSYVLGGRAMEIVHEPRDLERYMREAVKVSNDSPVLLDRFLNDAI 764

Query: 858  EIDVDALADSCGN-VVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAK 916
            E DVDAL D  GN V IGG+MEHIEQAGVHSGDSAC +P  ++S + +D +   T  +AK
Sbjct: 765  ECDVDALCD--GNRVFIGGVMEHIEQAGVHSGDSACSLPPYSLSQATVDELKRQTAAMAK 822

Query: 917  RLNVCGLMNCQYAITTSGD---VYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSL 973
             LNV GLMN Q+AI        VY+LE NPRASRTVP+VSKA G  LAK AA  M+G+SL
Sbjct: 823  ALNVVGLMNVQFAIQQRNGEDIVYVLEVNPRASRTVPYVSKATGLSLAKIAARCMAGQSL 882

Query: 974  NDLGFTKEVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIA 1033
            +  G  +EV+P + SVKEAV PF KF G D +LGPEMRSTGEVMG+   F  A  K+Q+A
Sbjct: 883  DSQGIGEEVVPPYYSVKEAVFPFNKFPGVDPVLGPEMRSTGEVMGVGKVFGEALFKSQLA 942

Query: 1034 AGQKLPLSGTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKM 1093
            AG +LP  GTV +++ D  KP    +A+   D+G+ IV+T GTA  +E  GI V  V K+
Sbjct: 943  AGSRLPEKGTVLITVKDSDKPRAVTVARMLHDLGYPIVATRGTASAIEAAGIPVRVVNKV 1002

Query: 1094 HEGRPHAGDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEA 1153
             +GRPH  DM+ NG++ ++  T         D   +R   LA +VP  TT++GA A  E 
Sbjct: 1003 KDGRPHIVDMIKNGELALVFTTVDETRTAIADSRSIRIAALAARVPYYTTIAGANAAVEG 1062

Query: 1154 IRSLKS 1159
            ++ +++
Sbjct: 1063 LKHMQN 1068


>gi|260775356|ref|ZP_05884253.1| carbamoyl-phosphate synthase large chain [Vibrio coralliilyticus ATCC
            BAA-450]
 gi|260608537|gb|EEX34702.1| carbamoyl-phosphate synthase large chain [Vibrio coralliilyticus ATCC
            BAA-450]
          Length = 1076

 Score = 1233 bits (3191), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 618/1065 (58%), Positives = 781/1065 (73%), Gaps = 22/1065 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTDL+ ILILGAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDLKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  E+V +++EKERPDA+LPTMGGQTALN A+ L + G LE++GVE+IGA  DA
Sbjct: 63   ATYIEPIQWEVVRKIIEKERPDAVLPTMGGQTALNCALDLEKHGVLEEFGVEMIGATADA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  F +AMK+IG++ P +    T++E   + + +G FP IIRP+FT+GGTGGGI
Sbjct: 123  IDKAEDRSRFDKAMKSIGLECPRADTAKTMEEAYKVLDMVG-FPCIIRPSFTMGGTGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYNKEEFE IC+ GL  S T+++L+++SL+GWKEYE+EV+RD ADN +I+CSIEN DPMG
Sbjct: 182  AYNKEEFEEICRRGLDLSPTNELLIDESLIGWKEYEMEVVRDKADNCIIVCSIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            +HTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGVE GGSNVQF +NP DG +++IEMN
Sbjct: 242  IHTGDSITVAPAQTLTDKEYQLMRNASLAVLREIGVETGGSNVQFGINPKDGRMVIIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VG++LD++ NDIT   TPASFEP+IDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKIAAKLAVGFTLDELQNDITGGATPASFEPTIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWD- 505
            F FEKF G+   LTTQMKSVGE MA+GR  QES QKALR LE G +G+    + +LD   
Sbjct: 362  FNFEKFAGANDRLTTQMKSVGEVMAIGRNQQESLQKALRGLEVGANGF--DEMVDLDAPD 419

Query: 506  -WEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQ 564
                +++ L+    +R+  I  A + GM VD +  L+ ID+WFL Q +EL+++E  +   
Sbjct: 420  ALTTIRHELKEAGAERIWYIADAFRAGMSVDGVFNLTAIDRWFLVQIEELVNLENQVKAG 479

Query: 565  SVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEAN 624
              + +T+D   ++KR+GFSD +++     +E E+R  R    + P YKRVDTCAAEF ++
Sbjct: 480  GFAGLTEDVLRKMKRKGFSDARLSSILGVSENEIRRLRDQYDIHPVYKRVDTCAAEFSSD 539

Query: 625  TPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMN 684
            T YMYSSYD ECE+ PT K K+++LGGGPNRIGQGIEFDYCC H S +L+  GYETIM+N
Sbjct: 540  TAYMYSSYDEECEAQPTDKDKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVN 599

Query: 685  SNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDE 744
             NPETVSTDYDTSDRLYFEP+T+EDVL+++ +E+P+G+IVQ+GGQTPLKL+         
Sbjct: 600  CNPETVSTDYDTSDRLYFEPVTLEDVLSIVRVEKPKGVIVQYGGQTPLKLA--------- 650

Query: 745  HRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKE 804
             R   A+G   V I GTSPD+ID AEDRERF A +  L + QP+     +   A+  +KE
Sbjct: 651  -RALEAAG---VPIIGTSPDAIDRAEDRERFQAAVDRLGLLQPENATVTTIEQAVEKSKE 706

Query: 805  IGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDAL 864
            IG+P+VVRPSYVLGGRAMEIVY ++ L  Y   AV V  E PVL+D++L DA E+D+DA+
Sbjct: 707  IGFPLVVRPSYVLGGRAMEIVYDEQDLRRYFNEAVSVSNESPVLLDRFLDDATEVDIDAI 766

Query: 865  ADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLM 924
             D    VVIGGIMEHIEQAGVHSGDSAC +P  T+S    D +     KLA  L V GLM
Sbjct: 767  CDG-ERVVIGGIMEHIEQAGVHSGDSACSLPAYTLSQEIQDKMREQVEKLAFELGVRGLM 825

Query: 925  NCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIP 984
            N Q+A+  + +VYL+E NPRA+RTVPFVSKA G PLAK AA VM+G+SL   GFTKE+IP
Sbjct: 826  NTQFAVKDN-EVYLIEVNPRAARTVPFVSKATGAPLAKIAARVMAGQSLESQGFTKEIIP 884

Query: 985  KHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTV 1044
             + SVKE VLPF KF G D LLGPEMRSTGEVMG+  +F  A+AKA++  G   P  G  
Sbjct: 885  PYYSVKEVVLPFNKFPGVDPLLGPEMRSTGEVMGVGATFAEAYAKAELGCGAVYPEGGRA 944

Query: 1045 FLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMV 1104
             LS+ +  K  +  +A     +G+++ +T GTA  L   GI    V K+HEGRPH  D +
Sbjct: 945  LLSVREGDKQRVVDLASKLTKLGYQLDATHGTAVILGEAGINPRLVNKVHEGRPHILDRI 1004

Query: 1105 ANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALA 1149
             N +   +V T++G    + D   LRR  LA KV   TT++ A A
Sbjct: 1005 KNNEYTYIVNTAAGRQAIE-DSKVLRRGALAEKVNYTTTLNAAFA 1048



 Score =  258 bits (660), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 164/429 (38%), Positives = 248/429 (57%), Gaps = 26/429 (6%)

Query: 67  KIDS-SAELSNGAA---SSKDQKL-GKRTDLRKILILGAGPIVIGQACEFDYSGTQACKA 121
           ++D+ +AE S+  A   SS D++   + TD  KI++LG GP  IGQ  EFDY    A  A
Sbjct: 528 RVDTCAAEFSSDTAYMYSSYDEECEAQPTDKDKIMVLGGGPNRIGQGIEFDYCCVHASLA 587

Query: 122 LKEEGYEVILINSNPATIMTDPGLADRTYITPMTPELVEQVLEKERPDALLPTMGGQTAL 181
           L+E+GYE I++N NP T+ TD   +DR Y  P+T E V  ++  E+P  ++   GGQT L
Sbjct: 588 LREDGYETIMVNCNPETVSTDYDTSDRLYFEPVTLEDVLSIVRVEKPKGVIVQYGGQTPL 647

Query: 182 NLAVALAESGALEKYGVELIGAKLDAIKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECI 241
            LA       ALE  GV +IG   DAI +AEDR+ F+ A+  +G+  P +    T+++ +
Sbjct: 648 KLA------RALEAAGVPIIGTSPDAIDRAEDRERFQAAVDRLGLLQPENATVTTIEQAV 701

Query: 242 SIANEIGEFPLIIRPAFTLGGTGGGIAYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKE 301
             + EIG FPL++RP++ LGG    I Y++++        ++ S  S VL+++ L    E
Sbjct: 702 EKSKEIG-FPLVVRPSYVLGGRAMEIVYDEQDLRRYFNEAVSVSNESPVLLDRFLDDATE 760

Query: 302 YELEVMRDLADNVVIICSIENVDPMGVHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREI 361
            +++ + D  + VVI   +E+++  GVH+GDS    PA TL+ +   ++R+    +  E+
Sbjct: 761 VDIDAICD-GERVVIGGIMEHIEQAGVHSGDSACSLPAYTLSQEIQDKMREQVEKLAFEL 819

Query: 362 GVECGGSNVQFAVNPVDGEVMVIEMNPRVSRSSALASKATGFPIAKMAAKLSVGYSLDQI 421
           GV  G  N QFAV   D EV +IE+NPR +R+    SKATG P+AK+AA++  G SL+  
Sbjct: 820 GVR-GLMNTQFAVK--DNEVYLIEVNPRAARTVPFVSKATGAPLAKIAARVMAGQSLES- 875

Query: 422 PNDITKKTPASFEPSIDYVVTKIPRFAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQ 481
               TK+    +     Y V ++    F KFPG +PLL  +M+S GE M +G TF E++ 
Sbjct: 876 -QGFTKEIIPPY-----YSVKEVV-LPFNKFPGVDPLLGPEMRSTGEVMGVGATFAEAYA 928

Query: 482 KALRSLECG 490
           KA   L CG
Sbjct: 929 KA--ELGCG 935


>gi|374290778|ref|YP_005037813.1| carbamoyl phosphate synthase, large subunit [Azospirillum lipoferum
            4B]
 gi|357422717|emb|CBS85557.1| carbamoyl phosphate synthase, large subunit [Azospirillum lipoferum
            4B]
          Length = 1082

 Score = 1233 bits (3191), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 629/1095 (57%), Positives = 795/1095 (72%), Gaps = 30/1095 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ I I+GAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDPGLAD
Sbjct: 3    KRTDIKSICIIGAGPIVIGQACEFDYSGVQACKALREEGYRVILVNSNPATIMTDPGLAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+TP +V ++LEKERPDALLPTMGGQTALN A+AL++ G LE+ GVE+IGAK D 
Sbjct: 63   ATYIEPITPAVVAKILEKERPDALLPTMGGQTALNTAMALSDDGTLERLGVEMIGAKRDV 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR LF+ AM  +G+++P S +  TL E +     +G  P IIRP+FTL GTGGGI
Sbjct: 123  IAKAEDRILFRDAMDKLGLESPKSRMVRTLTEAMDALEFVG-LPAIIRPSFTLAGTGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+ EFE I + GL AS   +VL+E+S+LGWKEYE+EV+RD ADN +I+C+IEN+DPMG
Sbjct: 182  AYNRAEFEDIVRGGLRASPVGEVLIEESVLGWKEYEMEVVRDGADNCIIVCAIENIDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAP+ TLTDKEYQ +RD SIA++REIGV+ GGSNVQFAVNP +G ++VIEMN
Sbjct: 242  VHTGDSITVAPSLTLTDKEYQIMRDASIAVLREIGVDTGGSNVQFAVNPANGRLIVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRF 447
            PRVSRSSALASKATGFPIAK+AAKL+VGY LD++ NDIT  TPASFEP+IDYVVTK+PRF
Sbjct: 302  PRVSRSSALASKATGFPIAKIAAKLAVGYRLDELTNDITGTTPASFEPTIDYVVTKMPRF 361

Query: 448  AFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNV-KELDWDW 506
             FEKF GSEPLLTT MKSVGEAM++GRTFQES QKALRS+E G +G+    +  E   D 
Sbjct: 362  TFEKFKGSEPLLTTSMKSVGEAMSIGRTFQESVQKALRSMETGLTGFNEVKIGGEETPDR 421

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
              ++ +L  P PDR+  I  A + G  V+E+  +S  D WFL Q K ++D E  +    +
Sbjct: 422  TAIRGALATPTPDRLLVIAQAFRHGFTVEEVQAVSKYDPWFLEQIKAIVDREAAIRDGGL 481

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
                K  + ++K+ GFSD ++A   K+TE  V   R   GV P YKR+DTCAAEF + TP
Sbjct: 482  PT-DKAGWLKLKQMGFSDARLAELAKTTEAAVAAARRMAGVTPVYKRIDTCAAEFASATP 540

Query: 627  YMYSSYDF------ECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYET 680
            YMYS+Y+       ECES PT K+KV+ILGGGPNRIGQGIEFDYCC H  ++LQ AG ET
Sbjct: 541  YMYSTYETDGTGEAECESEPTDKRKVVILGGGPNRIGQGIEFDYCCVHAVYALQEAGIET 600

Query: 681  IMMNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPE----GIIVQFGGQTPLKLSL 736
            IM+N NPETVSTDYDT+DRLYFEPLT EDV+ ++ +E+      G IVQFGGQTPLKL+ 
Sbjct: 601  IMVNCNPETVSTDYDTADRLYFEPLTAEDVVELVRVEQRNGNVLGCIVQFGGQTPLKLA- 659

Query: 737  PIHQYLDEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEA 796
                        +A     + I GTSPD+ID AEDRERF  ++ EL+++QP  G+A+S  
Sbjct: 660  ------------AALEAAGIPILGTSPDAIDLAEDRERFQKLLHELNLKQPANGLARSLE 707

Query: 797  DALAIAKEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDA 856
            +A A+A  IG+PVV+RPSYVLGGRAMEIV+    L  Y+  AV+V  + PVLID YL DA
Sbjct: 708  EAEAVASRIGFPVVIRPSYVLGGRAMEIVHDMAGLQRYMGTAVQVSGKNPVLIDSYLQDA 767

Query: 857  IEIDVDALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAK 916
            IE+DVD + D   +V + G+MEHIE+AG+HSGDSAC +P  T+ +  +  I+  +  LA 
Sbjct: 768  IEVDVDVVCDGT-DVYVAGVMEHIEEAGIHSGDSACALPPYTLPADIIAEINRQSDALAH 826

Query: 917  RLNVCGLMNCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDL 976
             L V GLMN Q+A+   G VY+LE NPRASRTVPFV+KA G  +AK AA VM+G+ L+  
Sbjct: 827  ALKVVGLMNVQFAV-KDGTVYILEVNPRASRTVPFVAKATGTAIAKIAARVMAGEKLSAF 885

Query: 977  GFTKEVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQ 1036
                   P H +VKEAV PF +F G D++LGPEM+STGEVMG+D +F +AFAKAQ+ AG 
Sbjct: 886  TLNGPT-PPHTAVKEAVFPFARFPGVDIVLGPEMKSTGEVMGLDHNFALAFAKAQLGAGV 944

Query: 1037 KLPLSGTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEG 1096
             LP+ G+VF+S+ D  KP L  I+K   D+GF+I++TSGTA  L   G+  E + K+ EG
Sbjct: 945  TLPVKGSVFVSVKDRDKPALAVISKKLHDMGFRILATSGTAKVLSDAGVPAETINKVVEG 1004

Query: 1097 RPHAGDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRS 1156
            +PH  D + NG + +++ T+ G      D   LRR  L Y +P  TTV+GA A  EAI +
Sbjct: 1005 QPHIVDAMINGNVHLVINTTEGAQALS-DSFSLRRTALTYNIPYYTTVAGARAAVEAIAA 1063

Query: 1157 LKSNTVTMTALQDFF 1171
            L++ ++ +  LQ + 
Sbjct: 1064 LRNGSLEVAPLQSYL 1078


>gi|119469582|ref|ZP_01612486.1| carbamoyl-phosphate synthase large subunit [Alteromonadales bacterium
            TW-7]
 gi|392539360|ref|ZP_10286497.1| carbamoyl phosphate synthase large subunit [Pseudoalteromonas marina
            mano4]
 gi|119447117|gb|EAW28387.1| carbamoyl-phosphate synthase large subunit [Alteromonadales bacterium
            TW-7]
          Length = 1072

 Score = 1233 bits (3190), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 612/1067 (57%), Positives = 781/1067 (73%), Gaps = 18/1067 (1%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILILGAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  E+VE+++EKE+PDA+LPTMGGQTALN A+ L + G L K+GVELIGA  DA
Sbjct: 63   ATYIEPIHWEVVEKIIEKEKPDAVLPTMGGQTALNCALDLDKHGVLAKHGVELIGATADA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAE+R+ F  AMK IG++ P + I ++++E     + IG  P IIRP+FT+GGTGGG+
Sbjct: 123  IDKAENRERFDTAMKNIGLECPRAEIAHSMEEAKDTMSRIG-LPCIIRPSFTMGGTGGGV 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN EEFE IC+ GL  S T+++L+++SL+GWKEYE EV+RD  DN +I+C+IEN DPMG
Sbjct: 182  AYNMEEFEEICERGLDLSPTNELLIDESLIGWKEYETEVVRDKKDNCIIVCTIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGVE GGSNVQF +NP DG +++IEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQIMRNASMAVLREIGVETGGSNVQFGINPKDGRMVIIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITK-KTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT  KTPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKIAAKLAVGYTLDELQNDITGGKTPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            F FEKF G+   LTTQMKSVGE MA+GR  QES  KALR LE G +G+      +     
Sbjct: 362  FNFEKFAGANDRLTTQMKSVGEVMAIGRNQQESLHKALRGLEVGATGFNPIVALDDPKAK 421

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
            E++   LR P  +R+  I  AM+ GM V++++EL+ +++WFL Q ++++  E  +    +
Sbjct: 422  EKIIRELREPGAERIWYIADAMRHGMSVEDVYELTKVNRWFLVQIEDILKDEARIAEGGM 481

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
            + +  D   ++KR+GF+D +IA     +E E+R+KR  L ++P YKRVDTCAAEF ++T 
Sbjct: 482  AGLNADFLRKLKRKGFADPRIAEIAGVSEAEIRKKRHQLNIVPVYKRVDTCAAEFSSDTA 541

Query: 627  YMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSN 686
            YMYSSYD ECE+ PT K K++++GGGPNRIGQGIEFDYCC H + +L+  GYETIM+N N
Sbjct: 542  YMYSSYDEECEANPTDKDKIMVIGGGPNRIGQGIEFDYCCVHAALALRDDGYETIMVNCN 601

Query: 687  PETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHR 746
            PETVSTDYDTSDRLYFEP+T+EDVL ++ +E+P+G+IVQ+GGQTPLKL+          R
Sbjct: 602  PETVSTDYDTSDRLYFEPITLEDVLEIVRVEKPKGVIVQYGGQTPLKLA----------R 651

Query: 747  LPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEIG 806
               A+G   V + GTSPD+ID AEDRERF  +++ L + QP+     S  +A+  + EIG
Sbjct: 652  ELEANG---VPVIGTSPDAIDRAEDRERFQQLVERLDLLQPENATVTSTEEAILKSAEIG 708

Query: 807  YPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALAD 866
            +P+VVRPSYVLGGRAMEIVY ++ L  Y+  AV+   E PVL+D +L +AIE+DVDA+ D
Sbjct: 709  FPLVVRPSYVLGGRAMEIVYDEDDLRRYMTEAVQASNEAPVLLDHFLDNAIEVDVDAICD 768

Query: 867  SCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNC 926
                V+IGGIMEHIEQAGVHSGDSAC +P  ++S    D +      +A  L V GLMN 
Sbjct: 769  G-EQVIIGGIMEHIEQAGVHSGDSACSLPAHSLSQEVQDVMRKQVTDMALELGVVGLMNT 827

Query: 927  QYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPKH 986
            Q+A+   G VYL+E NPRA+RTVPFVSKA G  LAK AA  M+G+SL   G TKE+IP +
Sbjct: 828  QFAV-KDGKVYLIEVNPRAARTVPFVSKATGVALAKVAARCMAGQSLASQGITKEIIPPY 886

Query: 987  VSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVFL 1046
             SVKE VLPF KFQG D + GPEMRSTGEVMG+  +F  AFAKAQ+ A   LP  G   L
Sbjct: 887  YSVKEVVLPFAKFQGVDPIRGPEMRSTGEVMGVGDTFAEAFAKAQLGASNTLPRGGRALL 946

Query: 1047 SLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVAN 1106
            S+ +  K  +  +AK   ++GF++ +T GTA  LE  GI V RV K++EGRPH  D + N
Sbjct: 947  SVRNSDKSRIVELAKIMTELGFELDATGGTAKALEEAGINVRRVNKVYEGRPHILDYIKN 1006

Query: 1107 GQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEA 1153
             +   +V T+ G    + D   LRR  L  K    TT++ A AN  A
Sbjct: 1007 KEYSYIVNTTEGRQAIE-DSKVLRRGALQNKTNYTTTLNAAFANCTA 1052



 Score =  236 bits (601), Expect = 7e-59,   Method: Compositional matrix adjust.
 Identities = 154/422 (36%), Positives = 237/422 (56%), Gaps = 24/422 (5%)

Query: 67  KIDS-SAELSNGAA---SSKDQKL-GKRTDLRKILILGAGPIVIGQACEFDYSGTQACKA 121
           ++D+ +AE S+  A   SS D++     TD  KI+++G GP  IGQ  EFDY    A  A
Sbjct: 528 RVDTCAAEFSSDTAYMYSSYDEECEANPTDKDKIMVIGGGPNRIGQGIEFDYCCVHAALA 587

Query: 122 LKEEGYEVILINSNPATIMTDPGLADRTYITPMTPELVEQVLEKERPDALLPTMGGQTAL 181
           L+++GYE I++N NP T+ TD   +DR Y  P+T E V +++  E+P  ++   GGQT L
Sbjct: 588 LRDDGYETIMVNCNPETVSTDYDTSDRLYFEPITLEDVLEIVRVEKPKGVIVQYGGQTPL 647

Query: 182 NLAVALAESGALEKYGVELIGAKLDAIKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECI 241
            LA        LE  GV +IG   DAI +AEDR+ F+Q ++ + +  P +    + +E I
Sbjct: 648 KLA------RELEANGVPVIGTSPDAIDRAEDRERFQQLVERLDLLQPENATVTSTEEAI 701

Query: 242 SIANEIGEFPLIIRPAFTLGGTGGGIAYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKE 301
             + EIG FPL++RP++ LGG    I Y++++        + AS  + VL++  L    E
Sbjct: 702 LKSAEIG-FPLVVRPSYVLGGRAMEIVYDEDDLRRYMTEAVQASNEAPVLLDHFLDNAIE 760

Query: 302 YELEVMRDLADNVVIICSIENVDPMGVHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREI 361
            +++ + D  + V+I   +E+++  GVH+GDS    PA +L+ +    +R     +  E+
Sbjct: 761 VDVDAICD-GEQVIIGGIMEHIEQAGVHSGDSACSLPAHSLSQEVQDVMRKQVTDMALEL 819

Query: 362 GVECGGSNVQFAVNPVDGEVMVIEMNPRVSRSSALASKATGFPIAKMAAKLSVGYSLDQI 421
           GV  G  N QFAV   DG+V +IE+NPR +R+    SKATG  +AK+AA+   G SL   
Sbjct: 820 GV-VGLMNTQFAVK--DGKVYLIEVNPRAARTVPFVSKATGVALAKVAARCMAGQSL--A 874

Query: 422 PNDITKKTPASFEPSIDYVVTKIPRFAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQ 481
              ITK+    +     Y V ++    F KF G +P+   +M+S GE M +G TF E+F 
Sbjct: 875 SQGITKEIIPPY-----YSVKEVV-LPFAKFQGVDPIRGPEMRSTGEVMGVGDTFAEAFA 928

Query: 482 KA 483
           KA
Sbjct: 929 KA 930


>gi|418737615|ref|ZP_13294012.1| carbamoyl-phosphate synthase, large subunit [Leptospira
            borgpetersenii serovar Castellonis str. 200801910]
 gi|410746809|gb|EKQ99715.1| carbamoyl-phosphate synthase, large subunit [Leptospira
            borgpetersenii serovar Castellonis str. 200801910]
          Length = 1106

 Score = 1233 bits (3190), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 632/1119 (56%), Positives = 802/1119 (71%), Gaps = 58/1119 (5%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            +R D+R +LILG+GPIVIGQACEFDYSGTQA KALKE+G  VIL+NSNPATIMTDP LAD
Sbjct: 3    RREDIRSVLILGSGPIVIGQACEFDYSGTQAAKALKEKGIRVILLNSNPATIMTDPDLAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TY+ PMT  +V+++LEKE+PDA+LPT+GGQTALNLA+A   +G LEKY VELIGAK+DA
Sbjct: 63   ATYVEPMTVPVVQKILEKEKPDAILPTVGGQTALNLALACNGAGLLEKYNVELIGAKVDA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            IKKAEDR+LFK+AM+ IGV+ P SG+ N L +   I  ++G  PLI+RPAFTLGGTGGGI
Sbjct: 123  IKKAEDRELFKKAMEKIGVRVPASGLANNLTDAAEIKKKLG-LPLIVRPAFTLGGTGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AY +E FE +   GL AS  SQVL+E+S+LGWKE+ELEVMRDLADNVVIICSIEN+DPMG
Sbjct: 182  AYTEETFEEVVSKGLKASPISQVLLEESVLGWKEFELEVMRDLADNVVIICSIENIDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAP QTL+DKE Q LRD SIAIIREIGVE GGSN+QFAVNP +G+V+VIEMN
Sbjct: 242  VHTGDSITVAPQQTLSDKECQNLRDMSIAIIREIGVETGGSNIQFAVNPANGDVIVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRF 447
            PRVSRSSALASKATGFPIAK+AA LS+GY+LD+I NDIT+ TPASFEPSIDYVVTK+PRF
Sbjct: 302  PRVSRSSALASKATGFPIAKIAALLSIGYTLDEIKNDITRVTPASFEPSIDYVVTKVPRF 361

Query: 448  AFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSN-VKEL---- 502
            AFEKFPG++  L  QMK+VGEAMA+GRTF+ESFQKALRSLE    G+G     +EL    
Sbjct: 362  AFEKFPGTDDTLGVQMKAVGEAMAIGRTFKESFQKALRSLEIDRYGFGSDGYFQELLYTR 421

Query: 503  ----DWDWEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVE 558
                D   E +   L+ PN  R+  +  A  +G  V++IH+L  +D+WFL Q ++L+ +E
Sbjct: 422  SLNSDQRKEWIDSFLKRPNDKRIFYVKLAFDEGYTVEQIHDLCKMDRWFLWQMEDLLKLE 481

Query: 559  QFLLTQSVSNMTKDDFYEVKRRGFSDKQIAFAT--------------------------K 592
            +    +  S + K     +KR GFS++Q++F                            K
Sbjct: 482  REYSEKGDSVLAK-----MKRAGFSNRQLSFLKNKKRILDLLDSDLRVDLKKTEIQNILK 536

Query: 593  STEKEVREKRLSLGVIPSYKRVDTCAAEFEANTPYMYSSYDFECESAPTQKKKVLILGGG 652
             +E+E+  +  S  ++P YKR+DTCA EFEA TPY YSSYD E ES  T  K V+ILGGG
Sbjct: 537  KSEEEIETELGSEKILPVYKRIDTCAGEFEAYTPYFYSSYDEEDESDVTSTKSVMILGGG 596

Query: 653  PNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSNPETVSTDYDTSDRLYFEPLTVEDVLN 712
            PNRIGQGIEFDYCCC  S++LQ  G E+IM+NSNPETVSTDYDTSDRLYFEPLT+EDV  
Sbjct: 597  PNRIGQGIEFDYCCCQASYALQDLGVESIMVNSNPETVSTDYDTSDRLYFEPLTLEDVYR 656

Query: 713  VIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHRLPSASGDGLVRIWGTSPDSIDAAEDR 772
            +   E+PEG+I+QFGGQTPLKL+  + +           G   V+I GTSPDSID AEDR
Sbjct: 657  IYQNEKPEGVIIQFGGQTPLKLAKDLER----------KG---VKILGTSPDSIDRAEDR 703

Query: 773  ERFNAIIKELSIEQPKGGIAKSEADALAIAKEIGYPVVVRPSYVLGGRAMEIVYTDETLV 832
            +RF  ++++L +  P+ GIA S  +A  IA+ + YP++VRPSYVLGGRAM I+  ++ L 
Sbjct: 704  KRFVEVLEKLKLRSPESGIATSMEEAREIAQNVKYPILVRPSYVLGGRAMLIINEEKELD 763

Query: 833  TYLENAVEVDPERPVLIDKYLSDAIEIDVDALADSCGNVVIGGIMEHIEQAGVHSGDSAC 892
             Y+E A E+  +RP+LID +L DA+E+DVDAL D    V + GIMEHIE+AG+HSGDSAC
Sbjct: 764  RYMEKAEEISKDRPLLIDSFLEDAVEVDVDALCDG-KEVFVTGIMEHIEEAGIHSGDSAC 822

Query: 893  MIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNCQYAITTSGDVYLLEANPRASRTVPFV 952
            ++P +T+S + +D I   T+ LA  L V GL+N QYA+     +Y++E NPRASRTVPFV
Sbjct: 823  ILPPQTLSKNMMDEIRKATVDLALELQVKGLINIQYAVKNE-ILYVIEVNPRASRTVPFV 881

Query: 953  SKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRS 1012
            SKA+GHP+ KYA  VM G+ L  L   KE+    VSVKE VLPF KF G D +LGPEMRS
Sbjct: 882  SKALGHPIVKYATRVMMGEPLKSLPLPKEMAFSQVSVKEVVLPFNKFPGVDTILGPEMRS 941

Query: 1013 TGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVFLSLNDLTKPHLERIAKAFLDIGFKIVS 1072
            TGEVMGI  +   AF K+Q  AG +LP  GTVF+S+ND TK  L    K   D+GF +++
Sbjct: 942  TGEVMGIASTVGEAFLKSQYMAGDELPSQGTVFVSINDKTKSELLSYIKDLSDLGFNLIA 1001

Query: 1073 TSGTAHFLELKGIAVERVLKMHEG-RPHAGDMVANGQIQMMVITSSGDSLDQIDGLKLRR 1131
            TSGT  FL   GI   ++ K+++G  P A D +   +I  ++I +    + + D   +R+
Sbjct: 1002 TSGTHKFLSDNGILSSKINKVYDGIFPTALDYIRENKIH-LIINTPLSRVTRDDSFTIRQ 1060

Query: 1132 RGLAYKVPVITTVSGALANAEAIRSLKSNTVTMTALQDF 1170
              + +KVP +TT + A A  + +  +K+   T+ +LQ+ 
Sbjct: 1061 AAIRFKVPCLTTSNAAKALIKGMVEMKNKGFTVHSLQEI 1099


>gi|359397316|ref|ZP_09190347.1| carbamoyl-phosphate synthase large subunit [Novosphingobium
            pentaromativorans US6-1]
 gi|357601270|gb|EHJ62958.1| carbamoyl-phosphate synthase large subunit [Novosphingobium
            pentaromativorans US6-1]
          Length = 1107

 Score = 1233 bits (3190), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 633/1127 (56%), Positives = 813/1127 (72%), Gaps = 64/1127 (5%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD+  IL++GAGPI+IGQACEFDYSGTQA KALKEEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDISSILVIGAGPIIIGQACEFDYSGTQAIKALKEEGYRVILVNSNPATIMTDPDMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TY+ P+TPE+V +++EKERPDA+LPTMGGQTALN A+AL   G LEKYGV++IGA  DA
Sbjct: 63   ATYVEPITPEIVAKIIEKERPDAVLPTMGGQTALNCALALFNDGTLEKYGVKMIGADADA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  F++AM  IG+++  SG+ +TL+E  ++    G  P IIRP+FTLGGTGGG+
Sbjct: 123  IDKAEDRQRFREAMDKIGLESARSGVAHTLEEAYAVLERTG-LPSIIRPSFTLGGTGGGV 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYNK EFEAI ++GL AS T++VL+E+SLLGWKEYE+EV+RD  DN +IICSIENVDPMG
Sbjct: 182  AYNKAEFEAIVRSGLDASPTTEVLIEESLLGWKEYEMEVVRDRHDNCIIICSIENVDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPA TLTDKEYQ +R  SI ++REIGVE GGSNVQFAVNP DG ++VIEMN
Sbjct: 242  VHTGDSITVAPALTLTDKEYQIMRTASIEVLREIGVETGGSNVQFAVNPKDGRLIVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRF 447
            PRVSRSSALASKATGFPIA++AAKL+VGY+LD+I N+IT  TPASFEP+IDYVVTKIPRF
Sbjct: 302  PRVSRSSALASKATGFPIARVAAKLAVGYTLDEIMNEITGATPASFEPTIDYVVTKIPRF 361

Query: 448  AFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDW-DW 506
            AFEKF GS+P LTT MKSVGE MA+GR  +ES QKALR LE G  G+  + V EL+    
Sbjct: 362  AFEKFKGSKPELTTAMKSVGEVMAIGRNIKESMQKALRGLETGLDGF--NRVPELEGAGR 419

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
            + +  +L    PDR+  +  AM++G  VDEIH ++F DKWFL   +E+I  E  ++   +
Sbjct: 420  DTITAALSKATPDRLLNVAQAMREGFSVDEIHAITFYDKWFLRHIEEIIAEEAKVMKDGL 479

Query: 567  SNMTKDDFYEVKRRGFSDKQI------------------------------AFATKSTEK 596
              +       +K  GFSDK++                              A A  ++E 
Sbjct: 480  P-IDAAGMRRLKSMGFSDKRLATLAVRSVHVAGGLGETQAKRSGLLHDALRAMAGATSED 538

Query: 597  EVREKRLSLGVIPSYKRVDTCAAEFEANTPYMYSSYDF------ECESAPTQKKKVLILG 650
            EVR+ R  LGV P +KR+D+CAAEFEA TPYMYS+Y+       E E+ P+ ++K++ILG
Sbjct: 539  EVRQLRTKLGVHPVFKRIDSCAAEFEAITPYMYSTYEAPFFGEPEDEAMPSDRRKIVILG 598

Query: 651  GGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSNPETVSTDYDTSDRLYFEPLTVEDV 710
            GGPNRIGQGIEFDYCC H  F+L  AGYETIM+N NPETVSTDYDTSDRLYFEPLT EDV
Sbjct: 599  GGPNRIGQGIEFDYCCVHACFALDDAGYETIMINCNPETVSTDYDTSDRLYFEPLTAEDV 658

Query: 711  LNVIDLERPE----GIIVQFGGQTPLKLSLPIHQYLDEHRLPSASGDGLVRIWGTSPDSI 766
            L ++ +E+ +    G+IVQFGGQTPLKL+      L++  +P         I GTSPD+I
Sbjct: 659  LEILRVEQQKGELVGVIVQFGGQTPLKLA----DALEKAGIP---------ILGTSPDAI 705

Query: 767  DAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEIGYPVVVRPSYVLGGRAMEIVY 826
            D AEDRERF A++++L ++QP  GIA+S  +A+A+A  IGYPV+ RPSYVLGGRAMEIV 
Sbjct: 706  DLAEDRERFAALVEKLGLKQPLNGIARSRDEAVAVANRIGYPVLTRPSYVLGGRAMEIVD 765

Query: 827  TDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALADSCGNVVIGGIMEHIEQAGVH 886
            +++ L  Y+  AV+V  + PVLID+YL DAIE DVDAL D    VV+ G+M+HIE+AG+H
Sbjct: 766  SEQQLDDYIATAVQVSGDSPVLIDQYLRDAIECDVDALCDG-DQVVVAGVMQHIEEAGIH 824

Query: 887  SGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNCQYAITTSGDVYLLEANPRAS 946
            SGDSAC +P  ++    ++ +      LA+ L V GLMN Q+A+   G+VYL+E NPRAS
Sbjct: 825  SGDSACTLPPYSLPDEIIEEMERQAEALARGLGVRGLMNVQFAV-KDGEVYLIEVNPRAS 883

Query: 947  RTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPKHVSVKEAVLPFEKFQGCDVLL 1006
            RTVPFV+KAIG P+AK AA VM+G+ L D    K  +  + +VKEAV PF +F G D +L
Sbjct: 884  RTVPFVAKAIGQPVAKIAARVMAGEKLADFPPFKRKL-DYFAVKEAVFPFARFPGVDPVL 942

Query: 1007 GPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVFLSLNDLTKPHLERIAKAFLDI 1066
             PEM+STGEVMGID  +P AFAKAQ+ AG +LP  GT F+S+ +  KPH+    +  +D 
Sbjct: 943  SPEMKSTGEVMGIDTDYPTAFAKAQLGAGMRLPTEGTAFVSVKNSDKPHILPAVRKLVDE 1002

Query: 1067 GFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVANGQIQMMVITSSG-DSLDQID 1125
            GF+I++TSGT  +L   GI VE V K+ EGRPH  D + +G+I ++  T+ G  SL   D
Sbjct: 1003 GFRIIATSGTQKYLADAGIPVEMVNKVAEGRPHIVDKIIDGEISLIFNTTEGWQSLK--D 1060

Query: 1126 GLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTVTMTALQDFFD 1172
               +R   L  KV + TT + ++A +EAI +++ + + + +LQD+++
Sbjct: 1061 SQSIRASALTAKVSIFTTAAASVAASEAIATIRGSQLEVRSLQDYYN 1107


>gi|116330483|ref|YP_800201.1| carbamoyl phosphate synthase large subunit [Leptospira borgpetersenii
            serovar Hardjo-bovis str. JB197]
 gi|116124172|gb|ABJ75443.1| Carbamoyl-phosphate synthase (glutamine- hydrolyzing), large subunit
            [Leptospira borgpetersenii serovar Hardjo-bovis str.
            JB197]
          Length = 1106

 Score = 1233 bits (3190), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 631/1119 (56%), Positives = 804/1119 (71%), Gaps = 58/1119 (5%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            +R D+R +LILG+GPIVIGQACEFDYSGTQA KALKE+G  VIL+NSNPATIMTDP LAD
Sbjct: 3    RREDIRSVLILGSGPIVIGQACEFDYSGTQAAKALKEKGIRVILLNSNPATIMTDPDLAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TY+ PMT  +V+++LEKE+PDA+LPT+GGQTALNLA+A   +G LEKY VELIGAK+DA
Sbjct: 63   ATYVEPMTVPVVQKILEKEKPDAILPTVGGQTALNLALACNGAGLLEKYNVELIGAKVDA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            IKKAEDR+LFK+AM+ IGV+ P SG+ N L +   I  ++G  PLI+RPAFTLGGTGGGI
Sbjct: 123  IKKAEDRELFKKAMEKIGVRVPASGLANNLTDAAEIKKKLG-LPLIVRPAFTLGGTGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AY +E FE +   GL AS  SQVL+E+S+LGWKE+ELEVMRDLADNVVIICSIEN+DPMG
Sbjct: 182  AYTEETFEEVVSKGLKASPISQVLLEESVLGWKEFELEVMRDLADNVVIICSIENIDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAP QTL+DKEYQ LRD SIAIIREIGVE GGSN+QFAVNP + +V+VIEMN
Sbjct: 242  VHTGDSITVAPQQTLSDKEYQNLRDMSIAIIREIGVETGGSNIQFAVNPANEDVIVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRF 447
            PRVSRSSALASKATGFPIAK+AA LS+GY+LD+I NDIT+ TPASFEPSIDYVVTK+PRF
Sbjct: 302  PRVSRSSALASKATGFPIAKIAALLSIGYTLDEIKNDITRVTPASFEPSIDYVVTKVPRF 361

Query: 448  AFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSN-VKEL---- 502
            AFEKFPG++  L  QMK+VGEAMA+GRTF+ESFQKALRSLE    G+G     +EL    
Sbjct: 362  AFEKFPGTDDTLGVQMKAVGEAMAIGRTFKESFQKALRSLEIDRYGFGSDGYFQELLYTR 421

Query: 503  ----DWDWEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVE 558
                D   E +   L+ PN  R+  +  A  +G  V++IH+L  +D+WFL Q ++L+ +E
Sbjct: 422  SLNSDQRKEWIDSFLKRPNDKRIFYVKLAFDEGYTVEQIHDLCKMDRWFLWQMEDLLKLE 481

Query: 559  QFLLTQSVSNMTKDDFYEVKRRGFSDKQIAFAT--------------------------K 592
            +    +  S + K     +KR GFS++Q++F                            K
Sbjct: 482  REYSEKGDSVLAK-----MKRAGFSNRQLSFLKNKKRILDLLDGDLRVDLKKTEIQNILK 536

Query: 593  STEKEVREKRLSLGVIPSYKRVDTCAAEFEANTPYMYSSYDFECESAPTQKKKVLILGGG 652
             +E+E+  +  S  ++P YKR+DTCA EFEA TPY YSSYD E ES  T  K V+ILGGG
Sbjct: 537  KSEEEIETELGSEKILPVYKRIDTCAGEFEAYTPYFYSSYDEEDESDVTSTKSVMILGGG 596

Query: 653  PNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSNPETVSTDYDTSDRLYFEPLTVEDVLN 712
            PNRIGQGIEFDYCCC  S++LQ  G E+IM+NSNPETVSTDYDTSDRLYFEPLT+EDV  
Sbjct: 597  PNRIGQGIEFDYCCCQASYALQDLGVESIMVNSNPETVSTDYDTSDRLYFEPLTLEDVYR 656

Query: 713  VIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHRLPSASGDGLVRIWGTSPDSIDAAEDR 772
            +   E+PEG+I+QFGGQTPLKL+  + +           G   V+I GTSPDSID AEDR
Sbjct: 657  IYQNEKPEGVIIQFGGQTPLKLAKDLER----------KG---VKILGTSPDSIDRAEDR 703

Query: 773  ERFNAIIKELSIEQPKGGIAKSEADALAIAKEIGYPVVVRPSYVLGGRAMEIVYTDETLV 832
            +RF  ++++L +  P+ GIA S  +A  IA+ + YP++VRPSYVLGGRAM I+  ++ L 
Sbjct: 704  KRFVEVLEKLKLRSPESGIATSMEEAREIAQNVKYPILVRPSYVLGGRAMLIINEEKELD 763

Query: 833  TYLENAVEVDPERPVLIDKYLSDAIEIDVDALADSCGNVVIGGIMEHIEQAGVHSGDSAC 892
             Y+E A E+  +RP+LID +L DA+E+DVDAL D    V + GIMEHIE+AG+HSGDSAC
Sbjct: 764  RYMEKAEEISKDRPLLIDSFLEDAVEVDVDALCDG-KEVFVTGIMEHIEEAGIHSGDSAC 822

Query: 893  MIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNCQYAITTSGDVYLLEANPRASRTVPFV 952
            ++P +T+S + +D I   T+ LA  L V GL+N QYA+     +Y++E NPRASRTVPFV
Sbjct: 823  ILPPQTLSKNMMDEIRKATVDLALELQVKGLINIQYAVKNE-ILYVIEVNPRASRTVPFV 881

Query: 953  SKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRS 1012
            SKA+GHP+ KYA  V+ G+SL +L   KE+    VSVKE VLPF KF G D +LGPEMRS
Sbjct: 882  SKALGHPIVKYATRVIMGESLKNLPLPKEMAFSQVSVKEVVLPFNKFPGVDTILGPEMRS 941

Query: 1013 TGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVFLSLNDLTKPHLERIAKAFLDIGFKIVS 1072
            TGEVMGI  +   AF K+Q  AG +LP  GTVF+S+ND TK  L    K   ++GF +++
Sbjct: 942  TGEVMGIASTVGEAFLKSQYMAGDELPSQGTVFVSINDKTKLELLSYIKDLSELGFNLIA 1001

Query: 1073 TSGTAHFLELKGIAVERVLKMHEG-RPHAGDMVANGQIQMMVITSSGDSLDQIDGLKLRR 1131
            TSGT  FL   GI   ++ K+++G  P A D +   +I  ++I +    + + D   +R+
Sbjct: 1002 TSGTHKFLSDNGILSSKINKVYDGIFPTALDYIRENKIH-LIINTPLSRVTRDDSFTIRQ 1060

Query: 1132 RGLAYKVPVITTVSGALANAEAIRSLKSNTVTMTALQDF 1170
              + +KVP +TT + A A  + +  +K+   T+ +LQ+ 
Sbjct: 1061 AAIRFKVPCLTTSNAAKALIKGMVEMKNKGFTVHSLQEI 1099


>gi|397170806|ref|ZP_10494216.1| carbamoyl phosphate synthase large subunit [Alishewanella aestuarii
            B11]
 gi|396087280|gb|EJI84880.1| carbamoyl phosphate synthase large subunit [Alishewanella aestuarii
            B11]
          Length = 1073

 Score = 1233 bits (3190), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 626/1083 (57%), Positives = 782/1083 (72%), Gaps = 19/1083 (1%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTDL+ ILILGAGPIVIGQACEFDYSG QACKALKEEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDLKSILILGAGPIVIGQACEFDYSGAQACKALKEEGYRVILVNSNPATIMTDPEMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  ++VE+++EKERP A+LPTMGGQTALN A+ L   G L KY VE+IGA  DA
Sbjct: 63   ATYIEPIHWQVVEKIIEKERPCAVLPTMGGQTALNCALDLERHGVLAKYNVEMIGATADA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  F +AM++IG+  P +G+ ++++E   +   IG FP IIRP+FT+GG+GGGI
Sbjct: 123  IDKAEDRSRFDKAMRSIGLACPRAGLAHSMEEAYQVLETIG-FPCIIRPSFTMGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEFE IC  GL  S T ++L+++SL+GWKEYE+EV+RD  DN +I+CSIEN DPMG
Sbjct: 182  AYNREEFEEICTRGLDLSPTKELLIDESLIGWKEYEMEVVRDKNDNCIIVCSIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGVE GGSNVQF +NPVDG +++IEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQIMRNASLAVLREIGVETGGSNVQFGINPVDGRMVIIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKK-TPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT   TPASFEPSIDYVVTK+PR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGYTLDELANDITGGVTPASFEPSIDYVVTKVPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            F FEKF G+   LTTQMKSVGE MA+GR  QES QKALR LE G SG             
Sbjct: 362  FNFEKFAGANDRLTTQMKSVGEVMAIGRNQQESLQKALRGLEIGVSGLDPIIDINASEAK 421

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
            E++   LR P   R+  I  A + GM +DEI  L+ ID WFL Q ++L+  EQ L     
Sbjct: 422  EKIIRELREPGAHRIWYIADAFRFGMSMDEIFNLTKIDPWFLVQIEDLVKEEQALSVDGF 481

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
            + + +     +KR+GF+DK+IA     +E EVR+KR S  + P YKRVDTCAAEF +NT 
Sbjct: 482  AALDEARIARLKRKGFADKRIAEVLGVSEAEVRKKRYSYNIHPVYKRVDTCAAEFASNTA 541

Query: 627  YMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSN 686
            YMYS+YD ECE+AP+ + K++I+GGGPNRIGQGIEFDYCC H + +L+  GYETIM+N N
Sbjct: 542  YMYSTYDEECEAAPSNRDKIMIIGGGPNRIGQGIEFDYCCVHAALALREDGYETIMVNCN 601

Query: 687  PETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHR 746
            PETVSTDYDTSDRLYFEP+T+EDVL ++  E+P+G+IVQ+GGQTPLKL+          R
Sbjct: 602  PETVSTDYDTSDRLYFEPITLEDVLEIVRKEQPKGVIVQYGGQTPLKLA----------R 651

Query: 747  LPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEIG 806
               A+G   V I GTSPD+ID AEDRERF   +  L ++QPK     S  +ALA A EIG
Sbjct: 652  ALEANG---VPIIGTSPDAIDRAEDRERFQQAVNRLGLKQPKNVTVTSFDEALAKAPEIG 708

Query: 807  YPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALAD 866
            YP+VVRPSYVLGGRAMEIVY ++ L  Y+  AV V  + PVL+D +L DAIE+D+DA+ D
Sbjct: 709  YPMVVRPSYVLGGRAMEIVYDEQDLRRYMNEAVSVSNDSPVLLDNFLDDAIEVDIDAICD 768

Query: 867  SCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNC 926
                VVIGGIMEHIEQAGVHSGDSAC +P  ++S    D +     KLA  L V GLMN 
Sbjct: 769  G-KEVVIGGIMEHIEQAGVHSGDSACTLPPHSLSQQIQDLMREQVRKLALELGVVGLMNT 827

Query: 927  QYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPKH 986
            Q+A+   G+VYL+E NPRA+RTVPFVSKA G  +AK  A  M+G+SL + G TKE+IP +
Sbjct: 828  QFAV-KDGEVYLIEVNPRAARTVPFVSKATGVAVAKVGARCMAGRSLAEQGITKEIIPPY 886

Query: 987  VSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVFL 1046
             SVKE V+PF KF G D +LGPEMRSTGEVMG+  +F  AFAKA++  G  +P  G   L
Sbjct: 887  FSVKEVVIPFNKFPGVDPILGPEMRSTGEVMGVGNTFEEAFAKAELGCGIMIPTGGRALL 946

Query: 1047 SLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVAN 1106
            S+ D  K  +  +AK  ++ GF++ ++ GTA  L+  GI    V K+ EGRP+  D + N
Sbjct: 947  SVRDSDKVRVVELAKRMVESGFELDASGGTAAALKAAGIECRVVNKVFEGRPNMLDRIKN 1006

Query: 1107 GQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEA-IRSLKSNTVTMT 1165
            G+   +V T+ G    + D   LRR  L +KV   TT++ A A  +A   S  +N V++ 
Sbjct: 1007 GEYSYVVNTTEGRQAIE-DSKMLRRGALQHKVNYTTTLNAAFATVKANAASAFANVVSVQ 1065

Query: 1166 ALQ 1168
             L 
Sbjct: 1066 ELH 1068


>gi|374336276|ref|YP_005092963.1| carbamoyl phosphate synthase large subunit [Oceanimonas sp. GK1]
 gi|372985963|gb|AEY02213.1| carbamoyl phosphate synthase large subunit [Oceanimonas sp. GK1]
          Length = 1075

 Score = 1233 bits (3190), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 619/1071 (57%), Positives = 784/1071 (73%), Gaps = 24/1071 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILILGAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIQSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  ++V +++EKERPDA+LPTMGGQTALN A+ L + G LE++GVE+IGA  DA
Sbjct: 63   ATYIEPIDWQVVRKIIEKERPDAVLPTMGGQTALNCALELEKHGVLEEFGVEMIGATADA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  F QAMK IG++ P +GI + +DE   +  ++G FP IIRP+FT+GGTGGGI
Sbjct: 123  IDKAEDRHRFDQAMKRIGLECPRAGIAHNMDEAYGVLEQVG-FPCIIRPSFTMGGTGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEFE IC  GL  S T+++L+++SL+GWKEYE+EV+RD  DN +I+C+IEN D MG
Sbjct: 182  AYNREEFEEICTRGLDLSPTNELLIDESLIGWKEYEMEVVRDRNDNCIIVCAIENFDAMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGVE GGSNVQF VNP DG +++IEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQLMRNASMAVLREIGVETGGSNVQFGVNPKDGRMVIIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKK-TPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL++GY+LD++ NDIT   TPASFEP+IDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKIAAKLAIGYTLDELQNDITGGLTPASFEPAIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            F FEKF G+   LTTQMKSVGE MA+GR FQES QKALR LE G +G+    V +L+ D 
Sbjct: 362  FNFEKFAGANDRLTTQMKSVGEVMAIGRNFQESVQKALRGLETGMNGF--DPVVDLN-DP 418

Query: 507  EQL---KYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLT 563
            E L   ++ L+ P  +R+  I  A + GM VD + +L+ +D+WFL Q +EL+ +E+ +  
Sbjct: 419  ESLARIRHELQDPGAERIWYIADAFRAGMSVDGVFKLTNVDRWFLVQIEELVKLEEQVKE 478

Query: 564  QSVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEA 623
              ++ +T +    +KR+GF+D ++       E EVR+ R    + P YKRVDTCAAEF  
Sbjct: 479  VGMAGLTPELLRALKRKGFADARLGKLLGVAEGEVRKLRHRHEIFPVYKRVDTCAAEFAT 538

Query: 624  NTPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMM 683
            NT YMYSSYD ECE+ P+ K K+++LGGGPNRIGQGIEFDYCC H S +L+  GYETIM+
Sbjct: 539  NTAYMYSSYDEECEANPSDKDKIIVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMV 598

Query: 684  NSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLD 743
            N NPETVSTDYDTSDRLYFEP+T+EDVL ++ +E+P+G+IVQ+GGQTPLKL+        
Sbjct: 599  NCNPETVSTDYDTSDRLYFEPVTLEDVLEIVRVEQPKGVIVQYGGQTPLKLA-------- 650

Query: 744  EHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAK 803
              R   A+G   V I GTSPD+ID AEDRERF   +  L ++QP+     +   A+ +A 
Sbjct: 651  --RALEAAG---VPIIGTSPDAIDRAEDRERFQQAVDRLGLKQPQNATVTALDQAVNLAV 705

Query: 804  EIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDA 863
            +IGYP+VVRPSYVLGGRAMEIVY ++ L  Y   AV V  E PVL+D++L DA E+D+DA
Sbjct: 706  DIGYPLVVRPSYVLGGRAMEIVYDEQDLRRYFNEAVSVSNESPVLLDRFLDDATEVDIDA 765

Query: 864  LADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGL 923
            + D   +VVIGGIMEHIEQAGVHSGDS C +P  T+S S  D +     KLA  L V GL
Sbjct: 766  ICDG-KDVVIGGIMEHIEQAGVHSGDSGCSLPPYTLSQSIQDEMREQVRKLALELGVVGL 824

Query: 924  MNCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVI 983
            MN Q+A+  + D+YL+E NPRA+RTVPFVSKA G PLAK AA  M+GKSL + G T+E+I
Sbjct: 825  MNVQFAVKGN-DIYLIEVNPRAARTVPFVSKATGVPLAKVAARAMAGKSLVEQGVTEEII 883

Query: 984  PKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGT 1043
            P + SVKE VLPF KF G D LLGPEMRSTGEVMG+  +F  AF KA + AG+ +P  G 
Sbjct: 884  PPYYSVKEVVLPFNKFPGVDPLLGPEMRSTGEVMGVGETFAEAFGKAHLGAGKAVPKEGR 943

Query: 1044 VFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDM 1103
              LS+    K  +  +A + ++ G++I +T GTA  L    I    V K+HEGRPH  D 
Sbjct: 944  ALLSVRHSDKQRVVDLAASLIEAGYQIDATHGTAVVLGEANINPRLVNKVHEGRPHILDR 1003

Query: 1104 VANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAI 1154
            + N +   +V T+ G    + D  +LRR  LA K+   TT++GA A   A+
Sbjct: 1004 IKNNEYSYIVNTAEGRQAIE-DSRQLRRGALAQKLSYTTTLNGAFATVMAM 1053


>gi|375109231|ref|ZP_09755480.1| carbamoyl phosphate synthase large subunit [Alishewanella jeotgali
            KCTC 22429]
 gi|374570535|gb|EHR41669.1| carbamoyl phosphate synthase large subunit [Alishewanella jeotgali
            KCTC 22429]
          Length = 1073

 Score = 1233 bits (3190), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 626/1083 (57%), Positives = 782/1083 (72%), Gaps = 19/1083 (1%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTDL+ ILILGAGPIVIGQACEFDYSG QACKALKEEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDLKSILILGAGPIVIGQACEFDYSGAQACKALKEEGYRVILVNSNPATIMTDPEMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  ++VE+++EKERP A+LPTMGGQTALN A+ L   G L KY VE+IGA  DA
Sbjct: 63   ATYIEPIHWQVVEKIIEKERPCAVLPTMGGQTALNCALDLERHGVLAKYNVEMIGATADA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  F +AM++IG+  P +G+ ++++E   +   IG FP IIRP+FT+GG+GGGI
Sbjct: 123  IDKAEDRSRFDKAMRSIGLACPRAGLAHSMEEAYQVLETIG-FPCIIRPSFTMGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEFE IC  GL  S T ++L+++SL+GWKEYE+EV+RD  DN +I+CSIEN DPMG
Sbjct: 182  AYNREEFEEICTRGLDLSPTKELLIDESLIGWKEYEMEVVRDKNDNCIIVCSIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGVE GGSNVQF +NPVDG +++IEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQIMRNASLAVLREIGVETGGSNVQFGINPVDGRMVIIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKK-TPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT   TPASFEPSIDYVVTK+PR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGYTLDELANDITGGVTPASFEPSIDYVVTKVPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            F FEKF G+   LTTQMKSVGE MA+GR  QES QKALR LE G SG             
Sbjct: 362  FNFEKFAGANDRLTTQMKSVGEVMAIGRNQQESLQKALRGLEIGVSGLDPIIDINASEAK 421

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
            E++   LR P   R+  I  A + GM +DEI  L+ ID WFL Q ++L+  EQ L     
Sbjct: 422  EKIIRELREPGAHRIWYIADAFRFGMSMDEIFNLTKIDPWFLVQIEDLVKEEQALSVDGF 481

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
            + + +     +KR+GF+DK+IA     +E EVR+KR S  + P YKRVDTCAAEF +NT 
Sbjct: 482  AALDETRIARLKRKGFADKRIAEVLGVSETEVRKKRYSYNIHPVYKRVDTCAAEFASNTA 541

Query: 627  YMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSN 686
            YMYS+YD ECE+AP+ + K++I+GGGPNRIGQGIEFDYCC H + +L+  GYETIM+N N
Sbjct: 542  YMYSTYDEECEAAPSNRDKIMIIGGGPNRIGQGIEFDYCCVHAALALREDGYETIMVNCN 601

Query: 687  PETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHR 746
            PETVSTDYDTSDRLYFEP+T+EDVL ++  E+P+G+IVQ+GGQTPLKL+          R
Sbjct: 602  PETVSTDYDTSDRLYFEPITLEDVLEIVRKEQPKGVIVQYGGQTPLKLA----------R 651

Query: 747  LPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEIG 806
               A+G   V I GTSPD+ID AEDRERF   +  L ++QPK     S  +ALA A EIG
Sbjct: 652  ALEANG---VPIIGTSPDAIDRAEDRERFQQAVNRLGLKQPKNVTVTSFDEALAKAPEIG 708

Query: 807  YPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALAD 866
            YP+VVRPSYVLGGRAMEIVY ++ L  Y+  AV V  + PVL+D +L DAIE+D+DA+ D
Sbjct: 709  YPMVVRPSYVLGGRAMEIVYDEQDLRRYMNEAVSVSNDSPVLLDNFLDDAIEVDIDAICD 768

Query: 867  SCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNC 926
                VVIGGIMEHIEQAGVHSGDSAC +P  ++S    D +     KLA  L V GLMN 
Sbjct: 769  G-KEVVIGGIMEHIEQAGVHSGDSACTLPPHSLSQQIQDLMREQVRKLALELGVVGLMNT 827

Query: 927  QYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPKH 986
            Q+A+   G+VYL+E NPRA+RTVPFVSKA G  +AK  A  M+G+SL + G TKE+IP +
Sbjct: 828  QFAV-KDGEVYLIEVNPRAARTVPFVSKATGVAVAKVGARCMAGRSLAEQGITKEIIPPY 886

Query: 987  VSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVFL 1046
             SVKE V+PF KF G D +LGPEMRSTGEVMG+  +F  AFAKA++  G  +P  G   L
Sbjct: 887  FSVKEVVIPFNKFPGVDPILGPEMRSTGEVMGVGNTFEEAFAKAELGCGIMIPTGGRALL 946

Query: 1047 SLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVAN 1106
            S+ D  K  +  +AK  ++ GF++ ++ GTA  L+  GI    V K+ EGRP+  D + N
Sbjct: 947  SVRDSDKVRVVELAKRMVESGFELDASGGTAAALKAAGIECRVVNKVFEGRPNMLDRIKN 1006

Query: 1107 GQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEA-IRSLKSNTVTMT 1165
            G+   +V T+ G    + D   LRR  L +KV   TT++ A A  +A   S  +N V++ 
Sbjct: 1007 GEYSYVVNTTEGRQAIE-DSKMLRRGALQHKVNYTTTLNAAFATVKANAASAFANVVSVQ 1065

Query: 1166 ALQ 1168
             L 
Sbjct: 1066 ELH 1068


>gi|94987381|ref|YP_595314.1| carbamoylphosphate synthase large subunit (split gene in MJ)
            [Lawsonia intracellularis PHE/MN1-00]
 gi|442556225|ref|YP_007366050.1| carbamoyl-phosphate synthase large subunit [Lawsonia intracellularis
            N343]
 gi|94731630|emb|CAJ54993.1| Carbamoylphosphate synthase large subunit (split gene in MJ)
            [Lawsonia intracellularis PHE/MN1-00]
 gi|441493672|gb|AGC50366.1| carbamoyl-phosphate synthase large subunit [Lawsonia intracellularis
            N343]
          Length = 1076

 Score = 1233 bits (3190), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 615/1094 (56%), Positives = 804/1094 (73%), Gaps = 28/1094 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KR+D++KI+++G+GPI+IGQACEFDYSGTQ  KALKEEGY V+L+NSNPATIMTDP LA+
Sbjct: 3    KRSDIKKIMVIGSGPIIIGQACEFDYSGTQGIKALKEEGYNVVLVNSNPATIMTDPTLAN 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  E V  ++ KERP ALLPT+GGQTALN+A+ LA+SG L + G ELIGA  D 
Sbjct: 63   HTYIEPLELETVTAIIRKERPCALLPTLGGQTALNIALNLAKSGILHECGTELIGASADV 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I+KAE R+ F+Q+M+ IG+K P S I  T++E   IA  I  FP+I+RPAFTLGGTGGGI
Sbjct: 123  IEKAESREKFRQSMENIGLKVPSSAIAKTIEEVHQIALNI-PFPVIVRPAFTLGGTGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN E+ E I   GL AS T++V++E+S++GWKE+E+EV+RD ADN +IICSIEN+DPMG
Sbjct: 182  AYNMEDLELIAIQGLTASPTNEVMIEQSVIGWKEFEMEVVRDAADNCIIICSIENLDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            +HTGDSITVAPAQTL+D EYQ++R+ SIAI+REIGV+ GGSN+QF VNP +GE++VIEMN
Sbjct: 242  IHTGDSITVAPAQTLSDIEYQKMRNASIAIMREIGVKTGGSNIQFGVNPKNGELVVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRF 447
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT KT A+FEP+IDY V KIPRF
Sbjct: 302  PRVSRSSALASKATGFPIAKIAAKLAVGYTLDELRNDITYKTSAAFEPAIDYCVVKIPRF 361

Query: 448  AFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDWE 507
             FEKFPG++  LTT MKS+GE MA+GRTF+E+FQK LRSLE G  G+  SN     +  E
Sbjct: 362  TFEKFPGAKDELTTSMKSIGEVMAIGRTFKEAFQKGLRSLETGLPGFNSSNYT---FTEE 418

Query: 508  QLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSVS 567
            +L   LR PN  R+ AI+ A+  GM ++ IH L+ ID WFL QFKELI++E  L   ++S
Sbjct: 419  ELPILLRNPNSLRIVAIHQALSSGMSLNHIHTLTHIDPWFLYQFKELIEMELILHNFALS 478

Query: 568  NMT-------KDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAE 620
            N         +    + K+ GFSDKQ+A A +  E ++R  R  L ++P+Y  VDTCAAE
Sbjct: 479  NTITASNPELRPLLLKAKQFGFSDKQLAIAWERPESDIRNLRKELDIVPTYYLVDTCAAE 538

Query: 621  FEANTPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYET 680
            FEA TPY YS+Y+   E +  +KKKV+I+GGGPNRIGQGIEFDYCCCH +++L+ +  E 
Sbjct: 539  FEAFTPYYYSTYESAKELSLEKKKKVIIIGGGPNRIGQGIEFDYCCCHAAYALKDSNIEA 598

Query: 681  IMMNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQ 740
            IM+NSNPETVSTDYDTSDRLYFEPLT EDV+N+I  E+P+G++VQFGGQTPL L+LP+ +
Sbjct: 599  IMINSNPETVSTDYDTSDRLYFEPLTFEDVMNIIAQEQPDGVVVQFGGQTPLNLALPLVR 658

Query: 741  YLDEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALA 800
                           V I GTSP++ID AE+R RF A++++L ++QP  G A S  +A +
Sbjct: 659  -------------AGVPILGTSPEAIDRAENRSRFQALLQKLKLQQPANGTATSINEAAS 705

Query: 801  IAKEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLE-NAVEVDPERPVLIDKYLSDAIEI 859
            IAK IGYP+VVRPSYVLGGRAM+I+Y ++ L+ Y      + + +RP+LID++L  AIE+
Sbjct: 706  IAKTIGYPIVVRPSYVLGGRAMQIIYEEKELIHYFSLYGKDCNLDRPILIDQFLEYAIEV 765

Query: 860  DVDALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLN 919
            DVDAL+D   NV I G+MEHIE+AG+HSGDS+C+IP  ++S   ++ I S T  LAK L 
Sbjct: 766  DVDALSDGT-NVYIAGVMEHIEEAGIHSGDSSCVIPPHSLSQELIEDIKSQTTALAKELQ 824

Query: 920  VCGLMNCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFT 979
            V GLMN Q+AI     +Y+LE NPRASRT PFVSKA G PL   A  VM G SL +L   
Sbjct: 825  VIGLMNIQFAI-KDNVIYILEVNPRASRTTPFVSKATGVPLPYLAMQVMLGVSLKELNPW 883

Query: 980  KEVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLP 1039
                  +VSVKE+V PF +F G D++LGPEM+STGEVMGI  +F  AF K Q   GQ LP
Sbjct: 884  AIEKTGYVSVKESVFPFHRFPGVDIVLGPEMKSTGEVMGIASTFEEAFLKGQQGVGQYLP 943

Query: 1040 LSGTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPH 1099
             +G VF S+ND  KP L  IAK +L +GF++++TSGTA  L    I V+ VLK++EGRP+
Sbjct: 944  STGKVFFSVNDRDKPLLIDIAKQYLQLGFELIATSGTAVLLSKNNIPVQHVLKVYEGRPN 1003

Query: 1100 AGDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKS 1159
              D++ NG I +++ T SG      D   +R+  L Y +P  TT++GA A A AI++ + 
Sbjct: 1004 IIDLIKNGDIALVINTPSGKQTTN-DSRTIRQATLQYNIPYSTTLAGAKAIARAIQASRD 1062

Query: 1160 NTVTMTALQDFFDV 1173
              + + ++Q+++++
Sbjct: 1063 TPIQVKSIQEYYNL 1076


>gi|349699314|ref|ZP_08900943.1| carbamoyl phosphate synthase large subunit [Gluconacetobacter
            europaeus LMG 18494]
          Length = 1084

 Score = 1233 bits (3190), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 623/1098 (56%), Positives = 799/1098 (72%), Gaps = 34/1098 (3%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD+  ILI+GAGPIVIGQACEFDYSG QACKALKEEGY VIL+NSNPATIMTDPGLAD
Sbjct: 3    KRTDISSILIIGAGPIVIGQACEFDYSGAQACKALKEEGYRVILVNSNPATIMTDPGLAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+TPE VE+++ +E+PDA+LPTMGGQTALN A+AL +SG L+K+ VELIGA  + 
Sbjct: 63   ATYIEPITPEFVERIILREKPDAVLPTMGGQTALNTAMALDKSGFLKKHDVELIGANAEV 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I +AEDR  F++AM  IG+++P S I +TL+E  S    +G  P +IRP+FT+GG+GGGI
Sbjct: 123  IDRAEDRQKFREAMDEIGIESPRSLIAHTLEEARSALATVG-LPAVIRPSFTMGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYNKEEF+ I  +GL AS T++VL+E+S+LGWKEYE+EV+RD ADN +IICSIEN+DPMG
Sbjct: 182  AYNKEEFDRIVSSGLDASPTTEVLIEESVLGWKEYEMEVVRDTADNCIIICSIENIDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPA TLTDKEYQRLRD S+A +R+IGVE GGSNVQF +NPVDG V+VIEMN
Sbjct: 242  VHTGDSITVAPALTLTDKEYQRLRDMSLACLRKIGVETGGSNVQFGINPVDGRVVVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRF 447
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT  TPASFEP+IDYVV KIPRF
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGYTLDELTNDITGSTPASFEPTIDYVVVKIPRF 361

Query: 448  AFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDWE 507
             FEKFPG+  LL+T MKSVGEAMA+GR+F E+ QK LRS+E G +G         D   +
Sbjct: 362  TFEKFPGTPALLSTSMKSVGEAMAIGRSFPEALQKGLRSMEIGLAGLDPVEAPG-DGGPD 420

Query: 508  QLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSVS 567
              + +L  P P+R+     A++ G+ V++IH+    + WFL +   ++  E  ++   + 
Sbjct: 421  AFRAALSQPRPERILMAAQALRAGLSVEDIHDACRFEPWFLRELARIVAAEHTVVRDGLP 480

Query: 568  NMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTPY 627
                D    +K  GFSD Q+A  + +   E+ + R S GV+P YKR+DTCA EF + TPY
Sbjct: 481  E-DADSLRTLKAMGFSDIQLARLSGTNADEIAKLRESRGVLPVYKRIDTCAGEFASPTPY 539

Query: 628  MYSSYDF-----ECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIM 682
            MYSSY+      ECES PT ++K++ILGGGPNRIGQGIEFDYCC H +++L+ AG+ETIM
Sbjct: 540  MYSSYEGGYGVPECESRPTDRRKIVILGGGPNRIGQGIEFDYCCVHAAYALREAGFETIM 599

Query: 683  MNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGI----IVQFGGQTPLKLSLPI 738
            +N NPETVSTDYDTSDRLYFEPLT EDV+ +I  E+  G     IVQ+GGQTPLKLS   
Sbjct: 600  VNCNPETVSTDYDTSDRLYFEPLTAEDVIALIRREQANGTVLGCIVQYGGQTPLKLS--- 656

Query: 739  HQYLDEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADA 798
                  H L +A     + + GT  D+ID AEDRERF A++  L + QP  GIA+S A+A
Sbjct: 657  ------HALEAAG----IPLLGTPADAIDRAEDRERFQAMLHRLGLRQPANGIARSPAEA 706

Query: 799  LAIAKEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVD----PERPVLIDKYLS 854
             A+A++IGYPVVVRPSYVLGGRAMEIV+   +L  Y+  A+++        PVLID YL+
Sbjct: 707  EAVAEKIGYPVVVRPSYVLGGRAMEIVHDRASLQRYMRVALQLAGAEVANGPVLIDHYLN 766

Query: 855  DAIEIDVDALADSCGN-VVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIK 913
            DAIE DVD +AD  GN V + G+MEHIE+AG+HSGDSAC +P  T+S + +  + S T  
Sbjct: 767  DAIEADVDCIAD--GNEVYVAGVMEHIEEAGIHSGDSACSLPPYTLSPAIVTELKSQTEA 824

Query: 914  LAKRLNVCGLMNCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSL 973
            +A+ L + GLMN QYAI    ++++LE NPRASRTVPFV+KA G P+AK  A VM+G  L
Sbjct: 825  MARELGIVGLMNVQYAIKGQ-EIFVLEVNPRASRTVPFVAKATGVPVAKIGARVMAGAKL 883

Query: 974  NDLGFTKEVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIA 1033
             +       +  HV+VKEAV PF +F   D +LGPEMRSTGEVMG+D SF  AFAK+Q+A
Sbjct: 884  GEFRLDDRAVAPHVAVKEAVFPFNRFPDVDTILGPEMRSTGEVMGLDASFERAFAKSQLA 943

Query: 1034 AGQKLPLSGTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKM 1093
            AG KLPLSGTVFLS+ D  KP ++ I +   ++GF+IV+T GTA  L   G++V+ V K+
Sbjct: 944  AGVKLPLSGTVFLSVRDSDKPAVKSIGRLLSEMGFRIVATRGTAKCLREAGVSVDVVNKV 1003

Query: 1094 HEGRPHAGDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEA 1153
             EGRP+  D + +G+IQM++ T+ G      D   +RR  L + +P  TT++GA A   A
Sbjct: 1004 LEGRPNCVDAIRSGEIQMVINTAQGAQAVS-DSFDIRRSALTHGIPHYTTIAGARAATHA 1062

Query: 1154 IRSLKSNTVTMTALQDFF 1171
            I +++   + +  LQ +F
Sbjct: 1063 IAAMREGVLEVAPLQSYF 1080


>gi|118602846|ref|YP_904061.1| carbamoyl-phosphate synthase large subunit [Candidatus Ruthia
            magnifica str. Cm (Calyptogena magnifica)]
 gi|118567785|gb|ABL02590.1| carbamoyl-phosphate synthase large subunit [Candidatus Ruthia
            magnifica str. Cm (Calyptogena magnifica)]
          Length = 1069

 Score = 1233 bits (3189), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 615/1084 (56%), Positives = 798/1084 (73%), Gaps = 24/1084 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KR DL+ ILI+G+GPI+IGQACEFDYSG QAC AL+EEGY VILINSNPATIMTDP +AD
Sbjct: 3    KRQDLKSILIIGSGPILIGQACEFDYSGAQACTALREEGYRVILINSNPATIMTDPKMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+    +E+++EKE+PDALLPTMGGQTALN A+ L   G LEK+GVE+IGAK +A
Sbjct: 63   ATYIEPIEWRTIEKIIEKEKPDALLPTMGGQTALNCALDLERHGVLEKHGVEMIGAKKEA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDRDLF++AM  IG+  P + + + +++  ++   +G FP IIRP+FT+GG+GGGI
Sbjct: 123  IDKAEDRDLFREAMLKIGLDMPKAAVAHNIEQAHTVQKTVG-FPTIIRPSFTMGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYNKEEF  IC+ GL  S T+++L+E+S+LGWKE+E+EV+RD  DN +I+CSIEN+DPMG
Sbjct: 182  AYNKEEFVEICERGLDLSPTNELLIEESILGWKEFEMEVVRDSKDNCIIVCSIENLDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            +HTGDSITVAPAQTLTDKEYQ +RD S+A++REIGV+ GGSNVQFA+NP +G + +IEMN
Sbjct: 242  IHTGDSITVAPAQTLTDKEYQVMRDASLAVLREIGVDTGGSNVQFALNPKNGRLTIIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIA++AAKL++GY+LD++ N+IT  K PASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIARVAAKLAIGYTLDELDNEITGGKIPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELD-WD 505
            FAFEKFP ++  LTTQMKSVGE MA+G TFQES QKALR LE      G   + +L+ +D
Sbjct: 362  FAFEKFPKADDRLTTQMKSVGEVMAIGSTFQESLQKALRGLET--DKVGLDPIIDLNAYD 419

Query: 506  -WEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQ 564
               +++        +R+  +  A + GM V+E+ +LS +D WFLTQ ++++  E  +   
Sbjct: 420  ARNKIRSECISARGERIFYLADAFRLGMSVEEVFDLSKVDPWFLTQIQDIVSTELQIDGI 479

Query: 565  SVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEAN 624
            +V+++  D  + +KR+GFSD ++A     +E  VRE+R +L + P +KRVD+CAAEF+  
Sbjct: 480  NVTDIDADKMFTLKRKGFSDARLAQLFCCSESSVRERRRALNIKPVFKRVDSCAAEFDTQ 539

Query: 625  TPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMN 684
            T Y+YS+Y  ECE+ PT KKK++ILGGGPNRIGQGIEFD CC H S +L+  G+ETIM+N
Sbjct: 540  TAYLYSTYQLECEANPTNKKKIMILGGGPNRIGQGIEFDCCCVHASLALREDGFETIMVN 599

Query: 685  SNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDE 744
             NPETVSTDYD SDRLYFEPLT+EDVL ++D+E P+GIIV +GGQTPLKL+  + +    
Sbjct: 600  CNPETVSTDYDISDRLYFEPLTLEDVLTIVDIENPDGIIVHYGGQTPLKLADALEK---- 655

Query: 745  HRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKE 804
                    +G   I GT+PD+ID AEDRERF+ +++EL ++QP  G A+S   A  IA  
Sbjct: 656  --------NG-ANIIGTTPDAIDLAEDRERFSKMLQELELKQPLNGTARSLEQAQDIADA 706

Query: 805  IGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDAL 864
            IG+P++VRPSYVLGGRAMEIVY  ++L  Y+  AV+V    PVL+D +L  AIE+D+DA+
Sbjct: 707  IGFPLIVRPSYVLGGRAMEIVYDKDSLEHYMYTAVQVSNNSPVLLDSFLDHAIEVDIDAI 766

Query: 865  ADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLM 924
             D   +VVIGGIM+HIEQAG+HSGDSAC +P  +++S  LD +    I +AK+LNV GLM
Sbjct: 767  CDG-EDVVIGGIMQHIEQAGIHSGDSACSLPPYSLASDVLDEMRIQVIAMAKKLNVIGLM 825

Query: 925  NCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIP 984
            N Q A    G++Y++E NPRASRTVPFVSKAIG PLA+ AA VMSG SL    FTKE+IP
Sbjct: 826  NTQLAY-QDGEIYIIEVNPRASRTVPFVSKAIGVPLARIAARVMSGVSLKAQNFTKEIIP 884

Query: 985  KHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTV 1044
            KH SVKEAV PF KF G D +LGPEMRSTGEVMGI   F  AF KAQ+AAG ++P +G V
Sbjct: 885  KHFSVKEAVFPFNKFLGVDPVLGPEMRSTGEVMGIGKDFASAFDKAQLAAGSRVPENGKV 944

Query: 1045 FLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMV 1104
            F+SL  L +  L  + K  L  GF +VST      L   G+  E V K+ EG PH  DM+
Sbjct: 945  FVSLRKLDRNELIDLGKKLLAQGFSLVSTRSNRDMLNEAGLECEVVNKVSEGSPHIVDMI 1004

Query: 1105 ANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTVTM 1164
             N  I  ++I S+ D+    D   +R + L +KVP  TTV+ A A  + ++   +N +T+
Sbjct: 1005 KNDDID-LIINSTEDTQGVEDAAAIRCQVLVHKVPFTTTVAAAFAILDGLKV--NNKLTI 1061

Query: 1165 TALQ 1168
            T LQ
Sbjct: 1062 TKLQ 1065


>gi|421497185|ref|ZP_15944369.1| carbamoyl phosphate synthase large subunit [Aeromonas media WS]
 gi|407183812|gb|EKE57685.1| carbamoyl phosphate synthase large subunit [Aeromonas media WS]
          Length = 1074

 Score = 1233 bits (3189), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 613/1068 (57%), Positives = 780/1068 (73%), Gaps = 18/1068 (1%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KR DL+ ILILGAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRNDLQSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+T E+V ++++KERPDA+LPTMGGQTALN A+ L + G L ++GVE+IGA  DA
Sbjct: 63   ATYIEPITWEVVREIIKKERPDAVLPTMGGQTALNCALDLEKHGVLAEFGVEMIGATADA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  F  AMK+IG++ P +GI + ++E   +   +G FP IIRP+FT+GG+GGGI
Sbjct: 123  IDKAEDRRRFDIAMKSIGLECPRAGIAHNMEEAWKVQQMVG-FPCIIRPSFTMGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN EEF  IC+ GL  S T ++L+++SL+GWKEYE+EV+RD  DN +I+C+IEN DPMG
Sbjct: 182  AYNTEEFVEICERGLDLSPTKELLIDESLIGWKEYEMEVVRDRNDNCIIVCAIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            +HTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGVE GGSNVQF +NP DG +++IEMN
Sbjct: 242  IHTGDSITVAPAQTLTDKEYQLMRNASMAVLREIGVETGGSNVQFGINPKDGRMVIIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL++GY+LD++ NDIT  +TPASFEP+IDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKIAAKLAIGYTLDELMNDITGGRTPASFEPAIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            F FEKF G+   LTTQMKSVGE MA+GR FQES  KALRSLE G +G+            
Sbjct: 362  FNFEKFAGANDRLTTQMKSVGEVMAIGRNFQESLHKALRSLETGKTGFDPMVDLNTPDSL 421

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
             ++++ L+    DR+  I  A + G+ +D I +L+ ID WFL Q +EL+ +E+ +  + +
Sbjct: 422  TRIRHELQDAGCDRIWYIADAFRAGLSMDGIFKLTKIDPWFLVQIEELVKLEEQVKERGM 481

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
            + +  D    +KR+GF+D ++A      E EVR+ R    + P YKRVDTCAAEF  NT 
Sbjct: 482  AGLDADFLRTLKRKGFADARLAKILGVAEGEVRKARARHNIFPVYKRVDTCAAEFATNTA 541

Query: 627  YMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSN 686
            YMYSSYD ECE+APT + K++I+GGGPNRIGQGIEFDYCC H + +L+  GYETIM+N N
Sbjct: 542  YMYSSYDEECEAAPTNRDKIMIIGGGPNRIGQGIEFDYCCVHAALALREDGYETIMVNCN 601

Query: 687  PETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHR 746
            PETVSTDYDTSDRLYFEP+T+EDVL ++ +E P+G+IVQ+GGQTPLKL+          R
Sbjct: 602  PETVSTDYDTSDRLYFEPVTLEDVLEIVRVENPKGVIVQYGGQTPLKLA----------R 651

Query: 747  LPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEIG 806
               A+G   V + GTSPD+ID AEDRERF + ++ L ++QP+ G   +   A+ +A  I 
Sbjct: 652  ALEANG---VPVIGTSPDAIDRAEDRERFQSAVERLGLKQPENGTVTALEQAVQVAARIT 708

Query: 807  YPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALAD 866
            YP+VVRPSYVLGGRAMEIVY ++ L  Y   AV V  E PVL+D++L DA E+DVDA+ D
Sbjct: 709  YPLVVRPSYVLGGRAMEIVYDEQDLRRYFAEAVSVSNESPVLLDRFLDDATEVDVDAICD 768

Query: 867  SCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNC 926
               +VVIGGIMEHIEQAG+HSGDSAC +P  T+S +  D +     KLA  L V GLMN 
Sbjct: 769  GV-DVVIGGIMEHIEQAGIHSGDSACSLPPYTLSKAIQDEMREQVRKLALELGVVGLMNV 827

Query: 927  QYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPKH 986
            Q+A+  + ++YL+E NPRA+RTVPFVSKA G PLAK AA VM+G+SL + GFT E+IP +
Sbjct: 828  QFAVKDN-EIYLIEVNPRAARTVPFVSKATGAPLAKIAARVMAGQSLQEQGFTTEIIPPY 886

Query: 987  VSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVFL 1046
             SVKE VLPF KF G D LLGPEMRSTGEVMG+  SF  A+AKAQ+ AG ++P  G   L
Sbjct: 887  YSVKEVVLPFAKFPGVDPLLGPEMRSTGEVMGVGSSFAEAYAKAQLGAGHQVPSEGRALL 946

Query: 1047 SLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVAN 1106
            S+    K  +  +A   L++G+++ +T GTA  L    I    V K+HEGRPH  D + N
Sbjct: 947  SVRHGDKERVVNLAAKLLELGYELDATHGTAVTLGEASINPRLVNKVHEGRPHILDRIKN 1006

Query: 1107 GQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAI 1154
            G+   +V T+ G    Q D  +LRR  L +KV   TT+  A A   AI
Sbjct: 1007 GEYTYIVNTAEGRQAIQ-DSKQLRRGALQHKVAYTTTLHAAFATCMAI 1053


>gi|114778232|ref|ZP_01453104.1| carbamoyl-phosphate synthase large subunit [Mariprofundus
            ferrooxydans PV-1]
 gi|114551479|gb|EAU54034.1| carbamoyl-phosphate synthase large subunit [Mariprofundus
            ferrooxydans PV-1]
          Length = 1071

 Score = 1233 bits (3189), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 616/1059 (58%), Positives = 794/1059 (74%), Gaps = 20/1059 (1%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            +RTDL  I+ILGAGPIVIGQACEFDYSG QACKALKEEGY VIL+NSNPATIMTDP  AD
Sbjct: 3    RRTDLHSIMILGAGPIVIGQACEFDYSGVQACKALKEEGYRVILVNSNPATIMTDPEFAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+T E+V +++EKERPDA+LPTMGGQTALN A++L + G LEK+ V+LIGA+ DA
Sbjct: 63   ATYIEPVTWEVVAKIIEKERPDAILPTMGGQTALNCALSLNKHGILEKFNVKLIGAQPDA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I  AEDR+ FK AM  +G++    G  +++DE  S+A++IG +P+IIRP+FTLGG+GGGI
Sbjct: 123  IDMAEDRERFKDAMDRLGLEMARGGFAHSMDEARSLASDIG-YPIIIRPSFTLGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN EEFE I  +G+ AS T ++LVE+S++GWKE+E+EVMRD ADN VIICSIEN+DPMG
Sbjct: 182  AYNPEEFEQIAASGIDASPTDEILVEESIIGWKEFEMEVMRDHADNCVIICSIENLDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQR+R+ SIAI+REIGVE GGSNVQFAVNPVDG ++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQRMRNASIAILREIGVETGGSNVQFAVNPVDGRLIVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRF 447
            PRVSRSSALASKATGFPIAK+AAKL+VG++LD+I NDIT +T A+FEPSIDYVVTK+PRF
Sbjct: 302  PRVSRSSALASKATGFPIAKIAAKLAVGFTLDEIRNDITGETWAAFEPSIDYVVTKLPRF 361

Query: 448  AFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDWE 507
            AFEKFPG++  LTTQMKSVGE MA+GR+F ES  KA+R LE G SG+     +++D +  
Sbjct: 362  AFEKFPGADVRLTTQMKSVGEVMAIGRSFTESLGKAMRGLETGTSGFDLKIPEDVDAE-R 420

Query: 508  QLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSVS 567
             L+  L +    R+  +  A++ G   + + +++ ID WF+ +   +I +EQ L+ +  S
Sbjct: 421  FLQEKLAIAGEQRLWWVGEALRAGWSEERVFDVTRIDPWFVREINTVIQLEQSLVGRDAS 480

Query: 568  NMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTPY 627
             +T  ++   KR G SD ++A     +E  +   R + GV+P +KRVDTCAAEFEA+TPY
Sbjct: 481  LLTAAEWRYAKREGLSDIRLAALLGESESAIHAMRQAHGVLPVFKRVDTCAAEFEAHTPY 540

Query: 628  MYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSNP 687
            +YS+Y+ ECE+ PT K+K+++LGGGPNRIGQGIEFDYCC H +F+L   GYETIM+N NP
Sbjct: 541  LYSAYEDECEARPTGKQKIMVLGGGPNRIGQGIEFDYCCVHAAFALSDDGYETIMVNCNP 600

Query: 688  ETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHRL 747
            ETVSTDYDTSDRLYFEPLT EDV+ ++D+E+P G+IVQFGGQTPLKL+  +         
Sbjct: 601  ETVSTDYDTSDRLYFEPLTFEDVMAIVDVEQPAGVIVQFGGQTPLKLAESLE-------- 652

Query: 748  PSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEIGY 807
              A+G   V I GT+PD ID AEDRERF  ++ EL + QP+ G A+S  +ALA+A  IGY
Sbjct: 653  --AAG---VPIIGTNPDMIDLAEDRERFQKLLHELKLLQPENGTARSTDEALAVAANIGY 707

Query: 808  PVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALADS 867
            PVVVRPSYVLGGRAM++V+ ++ L+ Y+  AV+  P+ PVL+D++L++AIE+DVDAL+D 
Sbjct: 708  PVVVRPSYVLGGRAMQVVHNEKGLLRYMREAVQASPDHPVLLDRFLNNAIELDVDALSDG 767

Query: 868  CGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNCQ 927
               VVIGGIMEHIE+AGVHSGDSAC +P  +IS + +D +   T  L   L+V GL+N Q
Sbjct: 768  -KRVVIGGIMEHIEEAGVHSGDSACCLPPHSISDAIIDEVRRQTAALGLALHVKGLLNIQ 826

Query: 928  YAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPKHV 987
            +A+     +Y+LE NPRASRTVPFVSKA G PLAK AA +M G+SL+D G  +   P   
Sbjct: 827  FAVQGE-TIYVLEVNPRASRTVPFVSKATGKPLAKIAARIMVGQSLDDQGIDEIAQPTTF 885

Query: 988  -SVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVFL 1046
             +VKEAV PF KF+G D LLGPEM+STGEVMGI   FP AF+KAQ+ AGQ+LP SGT F+
Sbjct: 886  RAVKEAVFPFVKFRGVDPLLGPEMKSTGEVMGIAEVFPAAFSKAQLGAGQRLPESGTAFI 945

Query: 1047 SLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEG-RPHAGDMVA 1105
            S+ D  KP + ++ +   D GF I++T+GT   L   GI  + V K+ +G RPH  D + 
Sbjct: 946  SVKDSDKPAVVQLGRLLDDAGFTILATAGTYTVLTGAGIKAQVVPKVTDGERPHIVDRLI 1005

Query: 1106 NGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTV 1144
            N ++  +V T+ G      D   +R+  L  ++   TT+
Sbjct: 1006 NDEVDFIVNTTEGVQAIH-DSQSIRQAALVREIVYFTTM 1043



 Score =  233 bits (595), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 146/407 (35%), Positives = 230/407 (56%), Gaps = 22/407 (5%)

Query: 79  ASSKDQKLGKRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPAT 138
           ++ +D+   + T  +KI++LG GP  IGQ  EFDY    A  AL ++GYE I++N NP T
Sbjct: 543 SAYEDECEARPTGKQKIMVLGGGPNRIGQGIEFDYCCVHAAFALSDDGYETIMVNCNPET 602

Query: 139 IMTDPGLADRTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGV 198
           + TD   +DR Y  P+T E V  +++ E+P  ++   GGQT L LA       +LE  GV
Sbjct: 603 VSTDYDTSDRLYFEPLTFEDVMAIVDVEQPAGVIVQFGGQTPLKLA------ESLEAAGV 656

Query: 199 ELIGAKLDAIKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAF 258
            +IG   D I  AEDR+ F++ +  + +  P +G   + DE +++A  IG +P+++RP++
Sbjct: 657 PIIGTNPDMIDLAEDRERFQKLLHELKLLQPENGTARSTDEALAVAANIG-YPVVVRPSY 715

Query: 259 TLGGTGGGIAYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIIC 318
            LGG    + +N++      +  + AS    VL+++ L    E +++ + D    VVI  
Sbjct: 716 VLGGRAMQVVHNEKGLLRYMREAVQASPDHPVLLDRFLNNAIELDVDALSD-GKRVVIGG 774

Query: 319 SIENVDPMGVHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVD 378
            +E+++  GVH+GDS    P  +++D     +R  + A+   + V+ G  N+QFAV    
Sbjct: 775 IMEHIEEAGVHSGDSACCLPPHSISDAIIDEVRRQTAALGLALHVK-GLLNIQFAVQ--- 830

Query: 379 GE-VMVIEMNPRVSRSSALASKATGFPIAKMAAKLSVGYSL-DQIPNDITKKTPASFEPS 436
           GE + V+E+NPR SR+    SKATG P+AK+AA++ VG SL DQ  ++I +  P +F   
Sbjct: 831 GETIYVLEVNPRASRTVPFVSKATGKPLAKIAARIMVGQSLDDQGIDEIAQ--PTTFRAV 888

Query: 437 IDYVVTKIPRFAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKA 483
            + V      F F KF G +PLL  +MKS GE M +   F  +F KA
Sbjct: 889 KEAV------FPFVKFRGVDPLLGPEMKSTGEVMGIAEVFPAAFSKA 929


>gi|407683244|ref|YP_006798418.1| carbamoyl phosphate synthase large subunit [Alteromonas macleodii
            str. 'English Channel 673']
 gi|407244855|gb|AFT74041.1| carbamoyl phosphate synthase large subunit [Alteromonas macleodii
            str. 'English Channel 673']
          Length = 1073

 Score = 1233 bits (3189), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 622/1076 (57%), Positives = 784/1076 (72%), Gaps = 18/1076 (1%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILI+GAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIQSILIIGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  E+V +++EKERPDA+LPTMGGQTALN A+ L + G LE++G ELIGA  DA
Sbjct: 63   ATYIEPIHWEVVRKIIEKERPDAILPTMGGQTALNCALELDKHGVLEEFGCELIGATADA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAE+R+ F +AMK IG++ P + I +++DE   + + IG FP IIRP+FT+GGTGGGI
Sbjct: 123  IDKAENRERFDKAMKNIGLECPRAEIAHSMDEAHDVLSRIG-FPCIIRPSFTMGGTGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN +EF  IC  GL  S T+++L+++SLLGWKEYE+EV+RD ADN +I+C+IEN DPMG
Sbjct: 182  AYNIDEFNEICHRGLDLSPTNELLIDESLLGWKEYEMEVVRDKADNCIIVCTIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKE+Q +R+ ++A++REIGVE GGSNVQF V+P  G +++IEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEFQLMRNAAMAVLREIGVETGGSNVQFGVDPKTGRMVIIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKK-TPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT   TPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGYTLDELANDITGGLTPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            F FEKF G+   LTTQMKSVGE MA+GR  QES QKALR LE G +G       E     
Sbjct: 362  FNFEKFAGANDRLTTQMKSVGEVMAIGRNQQESLQKALRGLEVGATGLNPMVDLEDPESR 421

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
             ++ Y LR P  +R+  I  A + GM V+E+  L+ ID+W+L Q ++LI +E  +    +
Sbjct: 422  NKVVYELRQPGAERIWYIGDAFRMGMTVEEVFNLTNIDRWYLVQLEDLILLEAKVAELGL 481

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
              +  D    +KR+GFSD ++A  TK  E ++RE R   G+ P YKRVDTCAAEF  +T 
Sbjct: 482  PGIDADFMRALKRKGFSDARLAELTKVAESDIRETRRDFGISPVYKRVDTCAAEFSTSTA 541

Query: 627  YMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSN 686
            YMYS+YD ECE+APT K K+++LGGGPNRIGQGIEFDYCC H + S++  GYETIM+N N
Sbjct: 542  YMYSTYDEECEAAPTDKDKIMVLGGGPNRIGQGIEFDYCCVHAALSMREDGYETIMVNCN 601

Query: 687  PETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHR 746
            PETVSTDYDTSDRLYFEP+T+EDVL ++  E+P+G+IVQ+GGQTPLKL+          R
Sbjct: 602  PETVSTDYDTSDRLYFEPVTLEDVLEIVAKEQPKGVIVQYGGQTPLKLA----------R 651

Query: 747  LPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEIG 806
               A+G   V + GTSP++ID AEDRERF  ++ +L+++QP      +   AL +A+EIG
Sbjct: 652  ALEAAG---VPVIGTSPEAIDRAEDRERFQQMVNKLNLKQPANATVTNVEQALTMAEEIG 708

Query: 807  YPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALAD 866
            +P+VVRPSYVLGGRAMEIVY  + L  YL  AV+V  + PVL+D++L DAIE+D+DA++D
Sbjct: 709  FPLVVRPSYVLGGRAMEIVYDLKDLKRYLNEAVKVSNDAPVLLDRFLDDAIEVDIDAISD 768

Query: 867  SCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNC 926
               +VVIGGIMEHIEQAGVHSGDSAC +P  ++S    D +      +A  L V GLMN 
Sbjct: 769  G-KDVVIGGIMEHIEQAGVHSGDSACSLPPHSLSKEIQDVMREQVKAMALELGVVGLMNT 827

Query: 927  QYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPKH 986
            Q+AI   G+VYL+E NPRA+RTVPFVSKA G PLAK AA VM+G SL + G T+EVIP  
Sbjct: 828  QFAI-KDGEVYLIEVNPRAARTVPFVSKATGVPLAKVAARVMAGVSLAEQGVTEEVIPPF 886

Query: 987  VSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVFL 1046
             SVKE VLPF KFQG D LLGPEMRSTGEVMG+  +F  A+AKA + AG  LP  G   +
Sbjct: 887  YSVKEVVLPFAKFQGVDPLLGPEMRSTGEVMGVGDTFEEAYAKANLGAGAPLPKQGKALI 946

Query: 1047 SLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVAN 1106
            S+ D  KP +  +AKA ++ GF I +T GTA  L   GI    V KM EGRP+  D + N
Sbjct: 947  SVRDNDKPRMIALAKALVEAGFSIEATRGTATELYDAGIMSTVVNKMSEGRPNIVDAIKN 1006

Query: 1107 GQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTV 1162
            G+   ++ T+ G      D + +RR  L  KV   TT++ A A   A  +   N V
Sbjct: 1007 GEYAYLINTTEGRQA-ITDSVYIRREALLNKVTYTTTMNAAFATIRAKSADDRNKV 1061


>gi|58038797|ref|YP_190761.1| carbamoyl phosphate synthase large subunit [Gluconobacter oxydans
            621H]
 gi|58001211|gb|AAW60105.1| Carbamoyl-phosphate synthase large chain [Gluconobacter oxydans 621H]
          Length = 1084

 Score = 1232 bits (3188), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 628/1102 (56%), Positives = 800/1102 (72%), Gaps = 42/1102 (3%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD+  ILI+GAGPIVIGQACEFDYSG QACKAL+EEGY VILINSNPATIMTDPGLAD
Sbjct: 3    KRTDISSILIIGAGPIVIGQACEFDYSGAQACKALREEGYRVILINSNPATIMTDPGLAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+TPE VE+++ KE+PDA+LPTMGGQTALN A+AL +SG L+K+ VELIGA  + 
Sbjct: 63   ATYIEPITPEFVERIILKEKPDAVLPTMGGQTALNAAMALDKSGFLKKHNVELIGADAEV 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I +AEDR  F++AM  IG+++P S I +TL+E  +   ++G  P IIRP+FT+GG GGGI
Sbjct: 123  IDRAEDRQKFREAMDEIGIESPRSTIAHTLEEARAALADVG-LPAIIRPSFTMGGAGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEF+ I   GL AS T++VL+E+S+LGWKEYE+EV+RD ADN +IICSIEN+DPMG
Sbjct: 182  AYNREEFDQIVTGGLDASPTTEVLIEESVLGWKEYEMEVVRDTADNCIIICSIENIDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPA TLTDKEYQR+RD SIA +R+IGVE GGSNVQF VNP DG ++VIEMN
Sbjct: 242  VHTGDSITVAPALTLTDKEYQRMRDASIACLRKIGVETGGSNVQFGVNPKDGRLVVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRF 447
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDITK TPASFEP+IDYVV KIPRF
Sbjct: 302  PRVSRSSALASKATGFPIAKIAAKLAVGYTLDELKNDITKTTPASFEPTIDYVVAKIPRF 361

Query: 448  AFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDWE 507
             FEKFPGS  LL+T MKSVGEAM++GR+F E+ QK LRS+E G +G    +  E   D  
Sbjct: 362  TFEKFPGSPALLSTSMKSVGEAMSVGRSFAEAIQKGLRSMETGLTGL---DPVEAPGDGS 418

Query: 508  QLKY--SLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQS 565
               Y  +L  P P+R+     A++ G+ V++I+E    + WFL Q ++++  E+    + 
Sbjct: 419  HNAYLAALAEPRPERILMAAQALRAGLSVEQINEACKFEPWFLRQLEDIVASER----EI 474

Query: 566  VSNMTKDDFYEVKR---RGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFE 622
              N    D Y ++R   +GFSD Q+A  +  + K+V   R  L V P Y+R+DTCAAEF 
Sbjct: 475  EKNGLPKDAYNLRRLKAQGFSDAQLARLSDQSVKDVAALREKLAVTPVYRRIDTCAAEFA 534

Query: 623  ANTPYMYSSYDF-----ECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAG 677
            ++TPY+YS+Y+      +CES PT + K++ILGGGPNRIGQGIEFDYCC H +++L+ AG
Sbjct: 535  SDTPYLYSTYEGGFGTPDCESRPTNRDKIVILGGGPNRIGQGIEFDYCCVHAAYALREAG 594

Query: 678  YETIMMNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLE----RPEGIIVQFGGQTPLK 733
            +ET+M+N NPETVSTDYDTSDRLYFEPLT EDV+ +I  E    +  G IVQ+GGQTPLK
Sbjct: 595  FETVMVNCNPETVSTDYDTSDRLYFEPLTAEDVIALIRTEAKGGKVLGCIVQYGGQTPLK 654

Query: 734  LSLPIHQYLDEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAK 793
            LS    + L+E  +P         + GT  D+ID AEDRERF A++++L + QP+ GIA+
Sbjct: 655  LS----RALEEAGIP---------LLGTPADAIDRAEDRERFQAMLRKLGLRQPRNGIAR 701

Query: 794  SEADALAIAKEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVE-VDPE---RPVLI 849
            S A+A  IA+E+GYPVV RPSYVLGGRAMEIVY    L  YL   +    PE    PVL+
Sbjct: 702  SPAEAEKIAEEVGYPVVARPSYVLGGRAMEIVYDKPGLKRYLNEVLRAAGPEVSTGPVLL 761

Query: 850  DKYLSDAIEIDVDALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISS 909
            D YL+DAIE DVD + D   NV + G+MEHIE+AG+HSGDSAC +P  T+S +    + S
Sbjct: 762  DHYLNDAIEADVDCICDG-ENVYVAGVMEHIEEAGIHSGDSACSLPPYTLSPALGTELRS 820

Query: 910  WTIKLAKRLNVCGLMNCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMS 969
             T  +A+ L + GLMN QYAI    +V++LE NPRASRTVPFV+KA G P+AK  A VM+
Sbjct: 821  QTEAMARELGIRGLMNVQYAIKDQ-EVFVLEVNPRASRTVPFVAKATGVPVAKIGARVMA 879

Query: 970  GKSLNDLGFTKEVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAK 1029
            G  L +       +  HV+VKEAV PF +F   D +LGPEMRSTGEVMG+D SF  AFAK
Sbjct: 880  GAKLTEFQLDGGAVSPHVAVKEAVFPFHRFANADTILGPEMRSTGEVMGLDSSFERAFAK 939

Query: 1030 AQIAAGQKLPLSGTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVER 1089
            +Q+AAG  LPLSGTVFLS+ D  K H++ +A+  + +GF I++TSGTA  LE   I V+R
Sbjct: 940  SQLAAGVTLPLSGTVFLSVRDSDKAHVQPLARKLVAMGFTILATSGTAARLEDADIPVKR 999

Query: 1090 VLKMHEGRPHAGDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALA 1149
            V K+ +GRP+  D + +G +QM++ TS G    Q D  ++RR  L   VP  TT++GA A
Sbjct: 1000 VNKVMQGRPNCVDSIRSGDVQMVINTSQGGQAAQ-DSYEIRRSALTMGVPHYTTIAGARA 1058

Query: 1150 NAEAIRSLKSNTVTMTALQDFF 1171
               AI  LK + + +  LQ +F
Sbjct: 1059 ATYAIAVLKEDNLGVAPLQSYF 1080


>gi|344174444|emb|CCA86238.1| carbamoyl-phosphate synthase large chain (Carbamoyl-phosphate
            synthetase ammonia chain) [Ralstonia syzygii R24]
          Length = 1081

 Score = 1232 bits (3188), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 618/1085 (56%), Positives = 808/1085 (74%), Gaps = 32/1085 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILI+GAGPI+IGQACEFDYSG QACKAL+EEG++V+L+NSNPATIMTDP  AD
Sbjct: 3    KRTDIKTILIIGAGPIIIGQACEFDYSGAQACKALREEGFKVVLVNSNPATIMTDPSTAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+T E+VE+++ KERPDA+LPTMGGQTALN A+ L   G L+KY VELIGA  +A
Sbjct: 63   VTYIEPITWEVVERIIAKERPDAILPTMGGQTALNCALDLHRHGVLKKYNVELIGASPEA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEI------GEFPLIIRPAFTLG 261
            I KAEDR  FK+AM  IG+ +  SGI ++L+E +++  +I      G +P++IRP+FTLG
Sbjct: 123  IDKAEDRQKFKEAMTKIGLGSAKSGIAHSLEEALAVQAQIARETSSGGYPIVIRPSFTLG 182

Query: 262  GTGGGIAYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIE 321
            GTGGGIAYN+EEFE ICK GL  S T+++L+E+SLLGWKEYE+EV+RD  DN +I+CSIE
Sbjct: 183  GTGGGIAYNREEFEDICKRGLDLSPTNELLIEESLLGWKEYEMEVVRDKQDNCIIVCSIE 242

Query: 322  NVDPMGVHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEV 381
            N+DPMG+HTGDSITVAPAQTLTDKEYQ LR+ S+A++REIGV+ GGSNVQF++NP DG +
Sbjct: 243  NLDPMGIHTGDSITVAPAQTLTDKEYQILRNASLAVLREIGVDTGGSNVQFSINPQDGRM 302

Query: 382  MVIEMNPRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYV 440
            +VIEMNPRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ N+IT   TPASFEPSIDYV
Sbjct: 303  IVIEMNPRVSRSSALASKATGFPIAKVAAKLAVGYTLDELKNEITGGATPASFEPSIDYV 362

Query: 441  VTKIPRFAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVK 500
            VTK+PRFAFEKFP ++  LTTQMKSVGE MA+GRTFQESFQKALR LE G  G     + 
Sbjct: 363  VTKVPRFAFEKFPQADSHLTTQMKSVGEVMAMGRTFQESFQKALRGLEVGVDG-----LD 417

Query: 501  ELDWDWEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQF 560
            E   D +++   +    PDR+  +  A + G+ +DE++  + +D WFL Q ++++  E  
Sbjct: 418  EKSTDRDEIIEEIGEAGPDRIWYLGDAFRLGLSIDEVYAETAVDPWFLAQIEDIVKTEAL 477

Query: 561  LLTQSVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAE 620
            +  +++ +++  +   +K++GFSD+++A   K+T + VREKR++  V P YKRVDTCAAE
Sbjct: 478  VKARALESLSAAELRLLKQKGFSDRRLAKLMKTTAQAVREKRIAEKVRPVYKRVDTCAAE 537

Query: 621  FEANTPYMYSSYDF---ECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAG 677
            F  NT Y+YS+Y+    ECE+ PT +KK+++LGGGPNRIGQGIEFDYCC H + +L+  G
Sbjct: 538  FATNTAYLYSTYEAEHGECEADPTDRKKIMVLGGGPNRIGQGIEFDYCCVHAALALREDG 597

Query: 678  YETIMMNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLP 737
            YETIM+N NPETVSTDYDTSDRLYFEP+T+EDVL ++D E+P G+IVQ+GGQTPLKL+L 
Sbjct: 598  YETIMVNCNPETVSTDYDTSDRLYFEPVTLEDVLEIVDKEKPVGVIVQYGGQTPLKLALD 657

Query: 738  IHQYLDEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEAD 797
            +           A+G   V I GT+PD IDAAEDRERF  ++ +L + QP    A++E +
Sbjct: 658  LE----------ANG---VPIIGTTPDMIDAAEDRERFQKLLHDLGLRQPPNRTARAEDE 704

Query: 798  ALAIAKEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAI 857
            AL +A+EIGYP+VVRPSYVLGGRAMEIV+    L  Y+  AV+V  + PVL+D++L+DAI
Sbjct: 705  ALKLAEEIGYPLVVRPSYVLGGRAMEIVHEPRDLERYMREAVKVSNDSPVLLDRFLNDAI 764

Query: 858  EIDVDALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKR 917
            E DVDAL+D    V IGG+MEHIEQAGVHSGDSAC +P  ++S + +D +   T  +A+ 
Sbjct: 765  ECDVDALSDG-KRVFIGGVMEHIEQAGVHSGDSACSLPPYSLSQATVDELKRQTAAMARA 823

Query: 918  LNVCGLMNCQYAITTSGD---VYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLN 974
            LNV GLMN Q+AI   G    VY+LE NPRASRTVP+VSKA G  LAK AA  M+G+SL+
Sbjct: 824  LNVVGLMNVQFAIQQKGGEDIVYVLEVNPRASRTVPYVSKATGISLAKVAARCMAGQSLD 883

Query: 975  DLGFTKEVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAA 1034
            + G   E++P + SVKEAV PF KF G D +LGPEMRSTGEVMG+  +F  A  K+Q+AA
Sbjct: 884  EQGIVNEIVPSYYSVKEAVFPFNKFPGVDPVLGPEMRSTGEVMGVGRTFGEALFKSQLAA 943

Query: 1035 GQKLPLSGTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMH 1094
            G +LP  GTV +++ D  KP    +A+    +G+ IV+T GTA  +E  GI V  V K+ 
Sbjct: 944  GSRLPEKGTVLMTVKDSDKPRAIEVARTLHTLGYPIVATRGTASAIEAAGIPVRVVNKVK 1003

Query: 1095 EGRPHAGDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAI 1154
            +GRPH  DM+ NG++ ++  T         D   +R   LA +V   TT++GA A  E +
Sbjct: 1004 DGRPHIVDMIKNGELALVFTTVDETRAAIADSRSIRTAALANRVTYYTTIAGARAAVEGL 1063

Query: 1155 RSLKS 1159
            + L++
Sbjct: 1064 KHLQN 1068


>gi|406596299|ref|YP_006747429.1| carbamoyl phosphate synthase large subunit [Alteromonas macleodii
            ATCC 27126]
 gi|406373620|gb|AFS36875.1| carbamoyl phosphate synthase large subunit [Alteromonas macleodii
            ATCC 27126]
          Length = 1073

 Score = 1232 bits (3188), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 623/1076 (57%), Positives = 783/1076 (72%), Gaps = 18/1076 (1%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILI+GAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIQSILIIGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  E+V +++EKERPDA+LPTMGGQTALN A+ L + G LE++G ELIGA  DA
Sbjct: 63   ATYIEPIHWEVVRKIIEKERPDAILPTMGGQTALNCALELDKHGVLEEFGCELIGATADA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAE+R+ F +AMK IG++ P + I +++DE   + + IG FP IIRP+FT+GGTGGGI
Sbjct: 123  IDKAENRERFDKAMKNIGLECPRAEIAHSMDEAHDVLSRIG-FPCIIRPSFTMGGTGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN +EF  IC  GL  S T+++L+++SLLGWKEYE+EV+RD ADN +I+C+IEN DPMG
Sbjct: 182  AYNIDEFNEICHRGLDLSPTNELLIDESLLGWKEYEMEVVRDKADNCIIVCTIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKE+Q +R+ ++A++REIGVE GGSNVQF V+P  G V++IEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEFQLMRNAAMAVLREIGVETGGSNVQFGVDPKTGRVVIIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKK-TPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT   TPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGYTLDELANDITGGLTPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            F FEKF G+   LTTQMKSVGE MA+GR  QES QKALR LE G +G       E     
Sbjct: 362  FNFEKFAGANDRLTTQMKSVGEVMAIGRNQQESLQKALRGLEVGATGLNPMVDLEDPESR 421

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
             ++ Y LR P  +R+  I  A + GM V+E+  L+ ID+W+L Q ++LI +E  +    +
Sbjct: 422  NKVVYELRQPGAERIWYIGDAFRMGMTVEEVFNLTNIDRWYLVQLEDLILLEAKVAELGL 481

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
              +  D    +KR+GFSD ++A  TK  E ++RE R   G+ P YKRVDTCAAEF  +T 
Sbjct: 482  PGIDADFMRALKRKGFSDARLAELTKVAESDIRETRRDFGISPVYKRVDTCAAEFSTSTA 541

Query: 627  YMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSN 686
            YMYS+YD ECE+APT K K+++LGGGPNRIGQGIEFDYCC H + S++  GYETIM+N N
Sbjct: 542  YMYSTYDEECEAAPTDKDKIMVLGGGPNRIGQGIEFDYCCVHAALSMREDGYETIMVNCN 601

Query: 687  PETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHR 746
            PETVSTDYDTSDRLYFEP+T+EDVL ++  E+P+G+IVQ+GGQTPLKL+          R
Sbjct: 602  PETVSTDYDTSDRLYFEPVTLEDVLEIVAKEQPKGVIVQYGGQTPLKLA----------R 651

Query: 747  LPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEIG 806
               A+G   V + GTSP++ID AEDRERF  ++ +L+++QP      +   AL +A+EIG
Sbjct: 652  ALEAAG---VPVIGTSPEAIDRAEDRERFQQMVNKLNLKQPANATVTNVEQALTMAEEIG 708

Query: 807  YPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALAD 866
            +P+VVRPSYVLGGRAMEIVY  + L  YL  AV+V  + PVL+D++L DAIE+D+DA+ D
Sbjct: 709  FPLVVRPSYVLGGRAMEIVYDLKDLKRYLNEAVKVSNDAPVLLDRFLDDAIEVDIDAICD 768

Query: 867  SCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNC 926
               +VVIGGIMEHIEQAGVHSGDSAC +P  ++S    D +      +A  L V GLMN 
Sbjct: 769  G-KDVVIGGIMEHIEQAGVHSGDSACSLPPHSLSKEIQDVMREQVKAMALELGVVGLMNT 827

Query: 927  QYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPKH 986
            Q+AI   G+VYL+E NPRA+RTVPFVSKA G PLAK AA VM+G SL + G T+EVIP  
Sbjct: 828  QFAI-KDGEVYLIEVNPRAARTVPFVSKATGVPLAKVAARVMAGVSLAEQGVTEEVIPPF 886

Query: 987  VSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVFL 1046
             SVKE VLPF KFQG D LLGPEMRSTGEVMG+  +F  A+AKA + AG  LP  G   +
Sbjct: 887  YSVKEVVLPFAKFQGVDPLLGPEMRSTGEVMGVGDTFEEAYAKANLGAGAPLPKQGKALI 946

Query: 1047 SLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVAN 1106
            S+ D  KP +  +AKA ++ GF I +T GTA  L   GI    V KM EGRP+  D + N
Sbjct: 947  SVRDNDKPRMIALAKALVEAGFSIEATRGTATELYDAGIMSTVVNKMSEGRPNIVDAIKN 1006

Query: 1107 GQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTV 1162
            G+   ++ T+ G      D + +RR  L  KV   TT++ A A   A  +   N V
Sbjct: 1007 GEYAYLINTTEGRQA-ITDSVYIRREALLNKVTYTTTMNAAFATIRAKSADDRNKV 1061


>gi|456877694|gb|EMF92703.1| carbamoyl-phosphate synthase, large subunit [Leptospira santarosai
            str. ST188]
          Length = 1097

 Score = 1232 bits (3188), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 633/1112 (56%), Positives = 801/1112 (72%), Gaps = 58/1112 (5%)

Query: 95   ILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLADRTYITPM 154
            +LILG+GPIVIGQACEFDYSGTQA KALKE+G  V+L+NSNPATIMTDP LAD TY+ PM
Sbjct: 1    MLILGSGPIVIGQACEFDYSGTQAAKALKEKGIRVVLLNSNPATIMTDPDLADATYVEPM 60

Query: 155  TPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDAIKKAEDR 214
            T  +V+++LEKE+PDA+LPT+GGQTALNLA+A   +G LEKY VELIGAK+DAIKKAEDR
Sbjct: 61   TVPVVQKILEKEKPDAILPTVGGQTALNLALACNSAGLLEKYNVELIGAKVDAIKKAEDR 120

Query: 215  DLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGIAYNKEEF 274
            +LFK+AM+ IGV+ P SG+ N L + + I  ++G  PLI+RPAFTLGGTGGGIAY +E F
Sbjct: 121  ELFKKAMEKIGVRVPASGLANNLTDAVEIKKKLG-LPLIVRPAFTLGGTGGGIAYTEETF 179

Query: 275  EAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMGVHTGDSI 334
            E     GL AS  SQVL+E+S+LGWKE+ELEVMRDLADNVVIICSIEN+DPMGVHTGDSI
Sbjct: 180  EETVSKGLKASPISQVLLEESVLGWKEFELEVMRDLADNVVIICSIENIDPMGVHTGDSI 239

Query: 335  TVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMNPRVSRSS 394
            TVAP QTL+DKEYQ LRD SIAIIREIGVE GGSN+QFAVNP +G+V+VIEMNPRVSRSS
Sbjct: 240  TVAPQQTLSDKEYQNLRDMSIAIIREIGVETGGSNIQFAVNPENGDVIVIEMNPRVSRSS 299

Query: 395  ALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRFAFEKFPG 454
            ALASKATGFPIAK+AA LS+GY+LD+I NDIT+ TPASFEPSIDYVVTK+PRFAFEKFPG
Sbjct: 300  ALASKATGFPIAKIAALLSIGYTLDEIKNDITRVTPASFEPSIDYVVTKVPRFAFEKFPG 359

Query: 455  SEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSN-VKEL--------DWD 505
            ++  L  QMK+VGEAMA+GRTF+ESFQKALRSLE    G+G     +EL        D  
Sbjct: 360  TDDTLGVQMKAVGEAMAIGRTFKESFQKALRSLEIDRYGFGSDGYFQELLYARSLNSDQR 419

Query: 506  WEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQS 565
             E +   L+ PN  R+  I  A  +G  VD+IH+L  +D+WFL Q ++L+ +E+    + 
Sbjct: 420  KEWIDSFLKRPNDKRIFYIKLAFDEGYTVDQIHDLCKVDRWFLWQMEDLLKLEKEYSEKG 479

Query: 566  VSNMTKDDFYEVKRRGFSDKQIAFAT--------------------------KSTEKEVR 599
             S ++K     +KR GFS++Q++F                            K +E+E+ 
Sbjct: 480  NSVLSK-----MKRAGFSNRQLSFLKNKKRILNLLDDGLRVDLKKTEIQNLLKKSEEEIE 534

Query: 600  EKRLSLGVIPSYKRVDTCAAEFEANTPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQG 659
             +  S  + P YKR+DTCA EFEA TPY YSSYD E ES  T  K V+ILGGGPNRIGQG
Sbjct: 535  VELGSEKIFPVYKRIDTCAGEFEAYTPYFYSSYDEEDESDVTSAKSVMILGGGPNRIGQG 594

Query: 660  IEFDYCCCHTSFSLQSAGYETIMMNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERP 719
            IEFDYCCC  S++LQ  G E+IM+NSNPETVSTDYDTSDRLYFEPLT+EDVL +   E+P
Sbjct: 595  IEFDYCCCQASYALQDLGVESIMINSNPETVSTDYDTSDRLYFEPLTLEDVLAIYQNEKP 654

Query: 720  EGIIVQFGGQTPLKLSLPIHQYLDEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAII 779
            EG+I+QFGGQTPLKL+  + +           G   V+I GTSPDSID AEDR+RF  ++
Sbjct: 655  EGVIIQFGGQTPLKLAKDLER----------KG---VKILGTSPDSIDRAEDRKRFVEVL 701

Query: 780  KELSIEQPKGGIAKSEADALAIAKEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAV 839
            ++L +  P+ GIA S  +A  IA++I YPV+VRPSYVLGGRAM I+  ++ L  Y+E A 
Sbjct: 702  EKLKLHSPESGIATSMEEAREIAQKIKYPVLVRPSYVLGGRAMLIINEEKELDRYMEKAE 761

Query: 840  EVDPERPVLIDKYLSDAIEIDVDALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTI 899
            E+  +RP+LID +L DA+E+DVDAL D   +V I GIMEHIE+AGVHSGDSAC++P +T+
Sbjct: 762  EISKDRPLLIDSFLEDAVEVDVDALCDG-KDVFITGIMEHIEEAGVHSGDSACVLPPQTL 820

Query: 900  SSSCLDTISSWTIKLAKRLNVCGLMNCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHP 959
            S + +  I   T  LA  L V GL+N QYA+     +Y++E NPRASRTVPFVSKA+GHP
Sbjct: 821  SKNMMGEIRKATADLALELQVKGLINIQYAVKNEV-LYIIEVNPRASRTVPFVSKALGHP 879

Query: 960  LAKYAALVMSGKSLNDLGFTKEVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGI 1019
            + KYA  +M G+SL  L   KE+    VSVKE VLPF KF G D +LGPEMRSTGEVMGI
Sbjct: 880  IVKYATRIMMGESLKSLPLPKEMAFSQVSVKEVVLPFNKFPGVDTILGPEMRSTGEVMGI 939

Query: 1020 DMSFPIAFAKAQIAAGQKLPLSGTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHF 1079
              +   AF K+Q  AG +LP  GTVF+S+ND TK  L    +   ++GF +++TSGT  F
Sbjct: 940  ASTAGEAFLKSQYMAGDELPSQGTVFVSINDKTKSELLSYIRDLSELGFNLIATSGTHKF 999

Query: 1080 LELKGIAVERVLKMHEGR-PHAGDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKV 1138
            L   GI   ++ K+++G+ P A D +   +I  ++I +    + + D   +R+  + +KV
Sbjct: 1000 LSDNGILSSKINKVYDGKFPTALDYIRENKIH-LIINTPLSRVTRDDSFTIRQAAIRFKV 1058

Query: 1139 PVITTVSGALANAEAIRSLKSNTVTMTALQDF 1170
            P +TT + A A  + +  +K+   T+ +LQ+ 
Sbjct: 1059 PCLTTSNAAKALIKGMVEMKNKGFTIHSLQEI 1090



 Score =  223 bits (568), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 141/395 (35%), Positives = 220/395 (55%), Gaps = 21/395 (5%)

Query: 90  TDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLADRT 149
           T  + ++ILG GP  IGQ  EFDY   QA  AL++ G E I+INSNP T+ TD   +DR 
Sbjct: 576 TSAKSVMILGGGPNRIGQGIEFDYCCCQASYALQDLGVESIMINSNPETVSTDYDTSDRL 635

Query: 150 YITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDAIK 209
           Y  P+T E V  + + E+P+ ++   GGQT L LA        LE+ GV+++G   D+I 
Sbjct: 636 YFEPLTLEDVLAIYQNEKPEGVIIQFGGQTPLKLA------KDLERKGVKILGTSPDSID 689

Query: 210 KAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGIAY 269
           +AEDR  F + ++ + + +P SGI  +++E   IA +I ++P+++RP++ LGG    I  
Sbjct: 690 RAEDRKRFVEVLEKLKLHSPESGIATSMEEAREIAQKI-KYPVLVRPSYVLGGRAMLIIN 748

Query: 270 NKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMGVH 329
            ++E +   +     S    +L++  L    E +++ + D  D V I   +E+++  GVH
Sbjct: 749 EEKELDRYMEKAEEISKDRPLLIDSFLEDAVEVDVDALCDGKD-VFITGIMEHIEEAGVH 807

Query: 330 TGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVM-VIEMNP 388
           +GDS  V P QTL+      +R  +  +  E+ V+ G  N+Q+AV     EV+ +IE+NP
Sbjct: 808 SGDSACVLPPQTLSKNMMGEIRKATADLALELQVK-GLINIQYAVK---NEVLYIIEVNP 863

Query: 389 RVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRFA 448
           R SR+    SKA G PI K A ++ +G SL  +P     K  A  + S+  VV       
Sbjct: 864 RASRTVPFVSKALGHPIVKYATRIMMGESLKSLP---LPKEMAFSQVSVKEVV-----LP 915

Query: 449 FEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKA 483
           F KFPG + +L  +M+S GE M +  T  E+F K+
Sbjct: 916 FNKFPGVDTILGPEMRSTGEVMGIASTAGEAFLKS 950


>gi|359451124|ref|ZP_09240537.1| carbamoyl-phosphate synthase large subunit [Pseudoalteromonas sp.
            BSi20480]
 gi|358043067|dbj|GAA76786.1| carbamoyl-phosphate synthase large subunit [Pseudoalteromonas sp.
            BSi20480]
          Length = 1072

 Score = 1232 bits (3188), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 612/1067 (57%), Positives = 780/1067 (73%), Gaps = 18/1067 (1%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILILGAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  E+VE+++EKE+PDA+LPTMGGQTALN A+ L + G L K+GVELIGA  DA
Sbjct: 63   ATYIEPIHWEVVEKIIEKEKPDAVLPTMGGQTALNCALDLDKHGVLAKHGVELIGATADA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAE+R+ F  AMK IG++ P + I ++++E     + IG  P IIRP+FT+GGTGGG+
Sbjct: 123  IDKAENRERFDTAMKNIGLECPRAEIAHSMEEAKDTMSRIG-LPCIIRPSFTMGGTGGGV 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN EEFE IC+ GL  S T+++L+++SL+GWKEYE EV+RD  DN +I+C+IEN DPMG
Sbjct: 182  AYNMEEFEEICERGLDLSPTNELLIDESLIGWKEYETEVVRDKKDNCIIVCTIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGVE GGSNVQF +NP DG +++IEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQIMRNASMAVLREIGVETGGSNVQFGINPKDGRMVIIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITK-KTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT  KTPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKIAAKLAVGYTLDELQNDITGGKTPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            F FEKF G+   LTTQMKSVGE MA+GR  QES  KALR LE G +G+      +     
Sbjct: 362  FNFEKFAGANDRLTTQMKSVGEVMAIGRNQQESLHKALRGLEVGATGFNPIVALDDPKAK 421

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
            E++   LR P  +R+  I  AM+ GM V++++EL+ +++WFL Q ++++  E  +    +
Sbjct: 422  EKIIRELREPGAERIWYIADAMRHGMSVEDVYELTKVNRWFLVQIEDILKDEARIAEGGM 481

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
            + +  D   ++KR+GF+D +IA     +E E+R+KR  L ++P YKRVDTCAAEF ++T 
Sbjct: 482  AGLNADFLRKLKRKGFADPRIAEIAGVSEAEIRKKRHQLNIVPVYKRVDTCAAEFSSDTA 541

Query: 627  YMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSN 686
            YMYSSYD ECE+ PT K K++++GGGPNRIGQGIEFDYCC H + +L+  GYETIM+N N
Sbjct: 542  YMYSSYDEECEANPTDKDKIMVIGGGPNRIGQGIEFDYCCVHAALALRDDGYETIMVNCN 601

Query: 687  PETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHR 746
            PETVSTDYDTSDRLYFEP+T+EDVL ++ +E+P+G+IVQ+GGQTPLKL+          R
Sbjct: 602  PETVSTDYDTSDRLYFEPITLEDVLEIVRVEKPKGVIVQYGGQTPLKLA----------R 651

Query: 747  LPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEIG 806
               A+G   V + GTSPD+ID AEDRERF  ++  L + QP+     S  +A+  + EIG
Sbjct: 652  ELEANG---VPVIGTSPDAIDRAEDRERFQQLVDRLDLLQPENATVTSTEEAILKSAEIG 708

Query: 807  YPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALAD 866
            +P+VVRPSYVLGGRAMEIVY ++ L  Y+  AV+   E PVL+D +L +AIE+DVDA+ D
Sbjct: 709  FPLVVRPSYVLGGRAMEIVYDEDDLRRYMTEAVQASNEAPVLLDHFLDNAIEVDVDAICD 768

Query: 867  SCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNC 926
                V+IGGIMEHIEQAGVHSGDSAC +P  ++S    D +      +A  L V GLMN 
Sbjct: 769  G-EQVIIGGIMEHIEQAGVHSGDSACSLPAHSLSQEVQDVMRKQVTDMALELGVVGLMNT 827

Query: 927  QYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPKH 986
            Q+A+   G VYL+E NPRA+RTVPFVSKA G  LAK AA  M+G+SL   G TKE+IP +
Sbjct: 828  QFAV-KDGKVYLIEVNPRAARTVPFVSKATGVALAKVAARCMAGQSLASQGITKEIIPPY 886

Query: 987  VSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVFL 1046
             SVKE VLPF KFQG D + GPEMRSTGEVMG+  +F  AFAKAQ+ A   LP  G   L
Sbjct: 887  YSVKEVVLPFAKFQGVDPIRGPEMRSTGEVMGVGDTFAEAFAKAQLGASNTLPRGGRALL 946

Query: 1047 SLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVAN 1106
            S+ +  K  +  +AK   ++GF++ +T GTA  LE  GI V RV K++EGRPH  D + N
Sbjct: 947  SVRNSDKSRIVELAKIMTELGFELDATGGTAKALEEAGINVRRVNKVYEGRPHILDYIKN 1006

Query: 1107 GQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEA 1153
             +   +V T+ G    + D   LRR  L  K    TT++ A AN  A
Sbjct: 1007 KEYSYIVNTTEGRQAIE-DSKVLRRGALQNKTNYTTTLNAAFANCTA 1052



 Score =  235 bits (599), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 154/422 (36%), Positives = 236/422 (55%), Gaps = 24/422 (5%)

Query: 67  KIDS-SAELSNGAA---SSKDQKL-GKRTDLRKILILGAGPIVIGQACEFDYSGTQACKA 121
           ++D+ +AE S+  A   SS D++     TD  KI+++G GP  IGQ  EFDY    A  A
Sbjct: 528 RVDTCAAEFSSDTAYMYSSYDEECEANPTDKDKIMVIGGGPNRIGQGIEFDYCCVHAALA 587

Query: 122 LKEEGYEVILINSNPATIMTDPGLADRTYITPMTPELVEQVLEKERPDALLPTMGGQTAL 181
           L+++GYE I++N NP T+ TD   +DR Y  P+T E V +++  E+P  ++   GGQT L
Sbjct: 588 LRDDGYETIMVNCNPETVSTDYDTSDRLYFEPITLEDVLEIVRVEKPKGVIVQYGGQTPL 647

Query: 182 NLAVALAESGALEKYGVELIGAKLDAIKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECI 241
            LA        LE  GV +IG   DAI +AEDR+ F+Q +  + +  P +    + +E I
Sbjct: 648 KLA------RELEANGVPVIGTSPDAIDRAEDRERFQQLVDRLDLLQPENATVTSTEEAI 701

Query: 242 SIANEIGEFPLIIRPAFTLGGTGGGIAYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKE 301
             + EIG FPL++RP++ LGG    I Y++++        + AS  + VL++  L    E
Sbjct: 702 LKSAEIG-FPLVVRPSYVLGGRAMEIVYDEDDLRRYMTEAVQASNEAPVLLDHFLDNAIE 760

Query: 302 YELEVMRDLADNVVIICSIENVDPMGVHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREI 361
            +++ + D  + V+I   +E+++  GVH+GDS    PA +L+ +    +R     +  E+
Sbjct: 761 VDVDAICD-GEQVIIGGIMEHIEQAGVHSGDSACSLPAHSLSQEVQDVMRKQVTDMALEL 819

Query: 362 GVECGGSNVQFAVNPVDGEVMVIEMNPRVSRSSALASKATGFPIAKMAAKLSVGYSLDQI 421
           GV  G  N QFAV   DG+V +IE+NPR +R+    SKATG  +AK+AA+   G SL   
Sbjct: 820 GV-VGLMNTQFAVK--DGKVYLIEVNPRAARTVPFVSKATGVALAKVAARCMAGQSL--A 874

Query: 422 PNDITKKTPASFEPSIDYVVTKIPRFAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQ 481
              ITK+    +     Y V ++    F KF G +P+   +M+S GE M +G TF E+F 
Sbjct: 875 SQGITKEIIPPY-----YSVKEVV-LPFAKFQGVDPIRGPEMRSTGEVMGVGDTFAEAFA 928

Query: 482 KA 483
           KA
Sbjct: 929 KA 930


>gi|300691214|ref|YP_003752209.1| carbamoyl-phosphate synthase large chain [Ralstonia solanacearum
            PSI07]
 gi|299078274|emb|CBJ50922.1| Carbamoyl-phosphate synthase large chain (Carbamoyl-phosphate
            synthetase ammonia chain) [Ralstonia solanacearum PSI07]
 gi|344170776|emb|CCA83208.1| carbamoyl-phosphate synthase large chain (Carbamoyl-phosphate
            synthetase ammonia chain) [blood disease bacterium R229]
          Length = 1081

 Score = 1232 bits (3188), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 618/1085 (56%), Positives = 807/1085 (74%), Gaps = 32/1085 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILI+GAGPI+IGQACEFDYSG QACKAL+EEG++V+L+NSNPATIMTDP  AD
Sbjct: 3    KRTDIKTILIIGAGPIIIGQACEFDYSGAQACKALREEGFKVVLVNSNPATIMTDPSTAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+T E+VE+++ KERPDA+LPTMGGQTALN A+ L   G L+KY VELIGA  +A
Sbjct: 63   VTYIEPITWEVVERIIAKERPDAILPTMGGQTALNCALDLHRHGVLKKYNVELIGASPEA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGE------FPLIIRPAFTLG 261
            I KAEDR  FK AM  IG+ +  SGI ++L+E +++ ++I        +P++IRP+FTLG
Sbjct: 123  IDKAEDRQKFKDAMTKIGLGSAKSGIAHSLEEALAVQSQIARETGTSGYPIVIRPSFTLG 182

Query: 262  GTGGGIAYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIE 321
            GTGGGIAYN+EEFE ICK GL  S T+++L+E+SLLGWKEYE+EV+RD  DN +I+CSIE
Sbjct: 183  GTGGGIAYNREEFEDICKRGLDLSPTNELLIEESLLGWKEYEMEVVRDKKDNCIIVCSIE 242

Query: 322  NVDPMGVHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEV 381
            N+DPMG+HTGDSITVAPAQTLTDKEYQ LR+ S+A++REIGV+ GGSNVQF++NP DG +
Sbjct: 243  NLDPMGIHTGDSITVAPAQTLTDKEYQILRNASLAVLREIGVDTGGSNVQFSINPQDGRM 302

Query: 382  MVIEMNPRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYV 440
            +VIEMNPRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ N+IT   TPASFEPSIDYV
Sbjct: 303  IVIEMNPRVSRSSALASKATGFPIAKVAAKLAVGYTLDELKNEITGGATPASFEPSIDYV 362

Query: 441  VTKIPRFAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVK 500
            VTK+PRFAFEKFP ++  LTTQMKSVGE MA+GRTFQESFQKALR LE G  G     + 
Sbjct: 363  VTKVPRFAFEKFPQADSHLTTQMKSVGEVMAMGRTFQESFQKALRGLEVGVDG-----LD 417

Query: 501  ELDWDWEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQF 560
            E   D +++   +    PDR+  +  A + G+ +DE++  + +D WFL Q ++++  E  
Sbjct: 418  EKSTDRDEIIEEIGEAGPDRIWYLGDAFRLGLSIDEVYAETAVDPWFLAQIEDIVKTEAL 477

Query: 561  LLTQSVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAE 620
            +  +++ +++  +   +K++GFSD+++A   K+T + VREKR++  V P YKRVDTCAAE
Sbjct: 478  VKARALESLSAAELRLLKQKGFSDRRLAKLMKTTAQAVREKRIAEKVRPVYKRVDTCAAE 537

Query: 621  FEANTPYMYSSYDF---ECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAG 677
            F  NT Y+YS+Y+    ECE+ PT +KK+++LGGGPNRIGQGIEFDYCC H + +L+  G
Sbjct: 538  FATNTAYLYSTYEAEHGECEADPTDRKKIMVLGGGPNRIGQGIEFDYCCVHAALALREDG 597

Query: 678  YETIMMNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLP 737
            YETIM+N NPETVSTDYDTSDRLYFEP+T+EDVL ++D E+P G+IVQ+GGQTPLKL+L 
Sbjct: 598  YETIMVNCNPETVSTDYDTSDRLYFEPVTLEDVLEIVDKEKPVGVIVQYGGQTPLKLALD 657

Query: 738  IHQYLDEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEAD 797
            +           A+G   V I GT+PD IDAAEDRERF  ++++L + QP    A++E +
Sbjct: 658  LE----------ANG---VPIIGTTPDMIDAAEDRERFQKLLQDLGLRQPPNRTARAEDE 704

Query: 798  ALAIAKEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAI 857
            AL +A EIGYP+VVRPSYVLGGRAMEIV+    L  Y+  AV+V  + PVL+D++L+DAI
Sbjct: 705  ALKLADEIGYPLVVRPSYVLGGRAMEIVHEPRDLERYMREAVKVSNDSPVLLDRFLNDAI 764

Query: 858  EIDVDALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKR 917
            E DVDAL+D    V IGG+MEHIEQAGVHSGDSAC +P  ++S + +D +   T  +A+ 
Sbjct: 765  ECDVDALSDG-KRVFIGGVMEHIEQAGVHSGDSACSLPPYSLSQATVDELKRQTAAMARA 823

Query: 918  LNVCGLMNCQYAITTSGD---VYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLN 974
            LNV GLMN Q+AI   G    VY+LE NPRASRTVP+VSKA G  LAK AA  M+G+SL+
Sbjct: 824  LNVVGLMNVQFAIQQKGGEDIVYVLEVNPRASRTVPYVSKATGISLAKVAARCMAGQSLD 883

Query: 975  DLGFTKEVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAA 1034
            + G   EV+P + SVKEAV PF KF G D +LGPEMRSTGEVMG+  +F  A  K+Q+AA
Sbjct: 884  EQGIVNEVVPSYYSVKEAVFPFNKFPGVDPVLGPEMRSTGEVMGVGRTFGEALFKSQLAA 943

Query: 1035 GQKLPLSGTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMH 1094
            G +LP  GTV +++ D  KP    +A+    +G+ IV+T GTA  +E  GI V  V K+ 
Sbjct: 944  GSRLPEKGTVLMTVKDSDKPRAIEVARTLHTLGYPIVATRGTASAIEAAGIPVRVVNKVK 1003

Query: 1095 EGRPHAGDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAI 1154
            +GRPH  DM+ NG++ ++  T         D   +R   LA +V   TT++GA A  E +
Sbjct: 1004 DGRPHIVDMIKNGELALVFTTVDETRAAIADSRSIRTAALANRVTYYTTIAGARAAVEGL 1063

Query: 1155 RSLKS 1159
            + L++
Sbjct: 1064 KHLQN 1068


>gi|392383336|ref|YP_005032533.1| carbamoyl phosphate synthase, large subunit [Azospirillum brasilense
            Sp245]
 gi|356878301|emb|CCC99180.1| carbamoyl phosphate synthase, large subunit [Azospirillum brasilense
            Sp245]
          Length = 1083

 Score = 1232 bits (3188), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 620/1095 (56%), Positives = 798/1095 (72%), Gaps = 29/1095 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ I I+GAGPIVIGQACEFDYSG QACKAL+EEG+ VIL+NSNPATIMTDPGLAD
Sbjct: 3    KRTDIKSICIIGAGPIVIGQACEFDYSGVQACKALREEGFRVILVNSNPATIMTDPGLAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+TP +V ++LEKERPDALLPTMGGQTALN A+AL++ G LE+ GVE+IGAK D 
Sbjct: 63   ATYIEPITPAVVAKILEKERPDALLPTMGGQTALNTAMALSDDGTLERLGVEMIGAKRDV 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR LF+ AM  +G+++P S +   + E       +G  P IIRP+FTL GTGGGI
Sbjct: 123  IAKAEDRILFRDAMDKLGLESPRSRLVRNMQEATEALEFVG-LPAIIRPSFTLAGTGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+ EFE I + GL AS   +VL+E+S+LGWKEYE+EV+RD ADN +I+C+IEN+DPMG
Sbjct: 182  AYNRAEFEDIVRGGLRASPVGEVLIEESVLGWKEYEMEVVRDKADNCIIVCAIENIDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAP+ TLTDKEYQ +R+ SIA++REIGVE GGSNVQFAVNP +G ++VIEMN
Sbjct: 242  VHTGDSITVAPSLTLTDKEYQIMRNASIAVLREIGVETGGSNVQFAVNPANGRLIVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRF 447
            PRVSRSSALASKATGFPIAK+AAKL++GY+LD++ NDIT  TPASFEP+IDYVVTK+PRF
Sbjct: 302  PRVSRSSALASKATGFPIAKIAAKLAIGYTLDELTNDITGTTPASFEPTIDYVVTKMPRF 361

Query: 448  AFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDW-DW 506
             FEKF G+EPLLTT MKSVGEAM++GRTFQES QKALRS+E G +G+    + + D  D 
Sbjct: 362  TFEKFAGTEPLLTTSMKSVGEAMSIGRTFQESVQKALRSMETGLTGFNEVRIGDSDTPDA 421

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
              ++ +L  P PDR+  I  A + G  V E+ ++S  D WFL Q K ++D EQ + +  +
Sbjct: 422  AAIRGALARPTPDRLLVIAQAFRHGFTVAEVQQVSKYDPWFLEQIKAIVDREQAIRSGGL 481

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
                K  +  +K+ GFSD ++A     +E E  E R + GV P +KR+DTCAAEF + TP
Sbjct: 482  PT-DKAGWQSLKQMGFSDARLAELAGKSEGEAAEARRAAGVTPVFKRIDTCAAEFASRTP 540

Query: 627  YMYSSYDF------ECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYET 680
            YMYS+Y+       ECES PT+KKKV+ILGGGPNRIGQGIEFDYCC H  ++L+ AG ET
Sbjct: 541  YMYSTYETDGTGAAECESDPTEKKKVVILGGGPNRIGQGIEFDYCCVHAVYALREAGIET 600

Query: 681  IMMNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGI----IVQFGGQTPLKLSL 736
            IM+N NPETVSTDYDT+DRLYFEPLT EDV+ ++ +E+  G     IVQFGGQTPLKL+ 
Sbjct: 601  IMVNCNPETVSTDYDTADRLYFEPLTAEDVIELVRVEQRNGTVLGCIVQFGGQTPLKLA- 659

Query: 737  PIHQYLDEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEA 796
                 L++  +P         I GTSPD+ID AEDRERF  ++ +L + QP  G+A+S  
Sbjct: 660  ---DALEKAGIP---------ILGTSPDAIDLAEDRERFQKLLHQLDLLQPANGLARSLE 707

Query: 797  DALAIAKEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDA 856
            +A  +A  IG+PVV+RPSYVLGGRAMEIV+    L  Y+ NAV+V  + PVLID YL DA
Sbjct: 708  EAETVAARIGFPVVIRPSYVLGGRAMEIVHDMAGLKRYMGNAVKVSGKNPVLIDSYLQDA 767

Query: 857  IEIDVDALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAK 916
            IE+DVD +AD+ G V I GIMEHIE+AG+HSGDSAC +P  ++ +  +  I      LA+
Sbjct: 768  IEVDVDVVADATGQVYIAGIMEHIEEAGIHSGDSACALPPYSLPAETIAEIGRQGEALAR 827

Query: 917  RLNVCGLMNCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDL 976
             L+V GLMN Q+A+   G VY+LE NPRASRTVPFV+KA G  +AK AA VM+G+ L D 
Sbjct: 828  ALHVVGLMNVQFAV-KDGTVYILEVNPRASRTVPFVAKATGTAIAKVAARVMAGEKLADF 886

Query: 977  GFTKEVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQ 1036
                   P H +VKEAV PF +F G D++LGPEM+STGEVMG+D +F +AFAK+Q+ AG 
Sbjct: 887  TLNGPT-PPHTAVKEAVFPFARFPGVDIVLGPEMKSTGEVMGLDHNFALAFAKSQLGAGV 945

Query: 1037 KLPLSGTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEG 1096
             LP+ GTVF+S+ +  KP   +I +    +GF++++T+GTA  L   G+  E + K+ EG
Sbjct: 946  TLPVQGTVFISVKERDKPSAVQIGQKLHAMGFRVLATTGTAAALRQAGVPAESINKVVEG 1005

Query: 1097 RPHAGDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRS 1156
            +PH  D + NG++ +++ T+ G      D   LRR  L Y +P  TT++GA A  EAI +
Sbjct: 1006 QPHIVDAMINGEVHLVINTTDGAQALS-DSFSLRRTALTYNLPYYTTMAGARAAVEAIAA 1064

Query: 1157 LKSNTVTMTALQDFF 1171
            L++ ++ +  LQ + 
Sbjct: 1065 LRNGSLEVAPLQSYL 1079


>gi|207742901|ref|YP_002259293.1| carbamoyl-phosphate synthase large chain (carbamoyl-phosphate
            synthetase ammonia chain) protein [Ralstonia solanacearum
            IPO1609]
 gi|421897993|ref|ZP_16328360.1| carbamoyl-phosphate synthase large chain (carbamoyl-phosphate
            synthetase ammonia chain) protein [Ralstonia solanacearum
            MolK2]
 gi|206589199|emb|CAQ36161.1| carbamoyl-phosphate synthase large chain (carbamoyl-phosphate
            synthetase ammonia chain) protein [Ralstonia solanacearum
            MolK2]
 gi|206594296|emb|CAQ61223.1| carbamoyl-phosphate synthase large chain (carbamoyl-phosphate
            synthetase ammonia chain) protein [Ralstonia solanacearum
            IPO1609]
          Length = 1081

 Score = 1232 bits (3187), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 619/1085 (57%), Positives = 805/1085 (74%), Gaps = 32/1085 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILI+GAGPI+IGQACEFDYSG QACKAL+EEG++V+L+NSNPATIMTDP  AD
Sbjct: 3    KRTDIKTILIIGAGPIIIGQACEFDYSGAQACKALREEGFKVVLVNSNPATIMTDPSTAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+T E+VE+++ KERPDA+LPTMGGQTALN A+ L   G L+KY VELIGA  +A
Sbjct: 63   VTYIEPITWEVVERIIAKERPDAILPTMGGQTALNCALDLHRHGVLQKYNVELIGASPEA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGE------FPLIIRPAFTLG 261
            I KAEDR  FK AM  IG+ +  SGI ++L+E +++  +I        +P++IRP+FTLG
Sbjct: 123  IDKAEDRQKFKDAMTKIGLGSAKSGIAHSLEEALAVQAQIARETGTSGYPIVIRPSFTLG 182

Query: 262  GTGGGIAYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIE 321
            GTGGGIAYN+EEFE ICK GL  S T+++L+E+SLLGWKEYE+EV+RD  DN +I+CSIE
Sbjct: 183  GTGGGIAYNREEFEDICKRGLDLSPTNELLIEESLLGWKEYEMEVVRDKKDNCIIVCSIE 242

Query: 322  NVDPMGVHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEV 381
            N+DPMG+HTGDSITVAPAQTLTDKEYQ LR+ S+A++REIGV+ GGSNVQF++NP DG +
Sbjct: 243  NLDPMGIHTGDSITVAPAQTLTDKEYQILRNASLAVLREIGVDTGGSNVQFSINPQDGRM 302

Query: 382  MVIEMNPRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYV 440
            +VIEMNPRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ N+IT   TPASFEPSIDYV
Sbjct: 303  IVIEMNPRVSRSSALASKATGFPIAKVAAKLAVGYTLDELKNEITGGATPASFEPSIDYV 362

Query: 441  VTKIPRFAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVK 500
            VTK+PRFAFEKFP ++  LTTQMKSVGE MA+GRTFQESFQKALR LE G  G     + 
Sbjct: 363  VTKVPRFAFEKFPQADSHLTTQMKSVGEVMAMGRTFQESFQKALRGLEVGVDG-----LD 417

Query: 501  ELDWDWEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQF 560
            E   D +++   +    PDR+  +  A + G+ +DE++  + +D WFL Q ++++  E  
Sbjct: 418  EKSTDRDEIIEEIGEAGPDRIWYLGDAFRLGLSIDEVYAETAVDPWFLAQIEDIVKTEAL 477

Query: 561  LLTQSVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAE 620
            +  +++ +++  +   +K++GFSD+++A   K+T + VREKR++  V P YKRVDTCAAE
Sbjct: 478  VKARTLESLSAAELRLLKQKGFSDRRLAKLMKTTAQAVREKRIAEKVRPVYKRVDTCAAE 537

Query: 621  FEANTPYMYSSYDF---ECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAG 677
            F  NT Y+YS+Y+    ECE+ PT +KK+++LGGGPNRIGQGIEFDYCC H + +L+  G
Sbjct: 538  FATNTAYLYSTYEAEHGECEAEPTDRKKIMVLGGGPNRIGQGIEFDYCCVHAALALREDG 597

Query: 678  YETIMMNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLP 737
            YETIM+N NPETVSTDYDTSDRLYFEP+T+EDVL ++D E+P G+IVQ+GGQTPLKL+L 
Sbjct: 598  YETIMVNCNPETVSTDYDTSDRLYFEPVTLEDVLEIVDKEKPVGVIVQYGGQTPLKLALD 657

Query: 738  IHQYLDEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEAD 797
            +           A+G   V I GT+PD IDAAEDRERF  ++ EL + QP    A++E +
Sbjct: 658  LE----------ANG---VPIIGTTPDMIDAAEDRERFQKLLHELGLRQPPNRTARAEDE 704

Query: 798  ALAIAKEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAI 857
            AL +A+EIGYP+VVRPSYVLGGRAMEIV+    L  Y+  AV+V  + PVL+D++L+DAI
Sbjct: 705  ALKLAEEIGYPLVVRPSYVLGGRAMEIVHEPRDLERYMREAVKVSNDSPVLLDRFLNDAI 764

Query: 858  EIDVDALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKR 917
            E DVD L+D    V IGG+MEHIEQAGVHSGDSAC +P  ++S + +D +   T  +AK 
Sbjct: 765  ECDVDCLSDG-KRVFIGGVMEHIEQAGVHSGDSACSLPPYSLSQATVDELKRQTAAMAKA 823

Query: 918  LNVCGLMNCQYAITTSGD---VYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLN 974
            LNV GLMN Q+AI   G    VY+LE NPRASRTVP+VSKA G  LAK AA  M+G+SL+
Sbjct: 824  LNVVGLMNVQFAIQQKGGEDIVYVLEVNPRASRTVPYVSKATGISLAKVAARCMAGQSLD 883

Query: 975  DLGFTKEVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAA 1034
            + G   EV+P + SVKEAV PF KF G D +LGPEMRSTGEVMG+  +F  A  K+Q+AA
Sbjct: 884  EQGINHEVVPSYYSVKEAVFPFNKFPGVDPVLGPEMRSTGEVMGVGRTFGEALFKSQLAA 943

Query: 1035 GQKLPLSGTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMH 1094
            G +LP  GTV +++ D  KP    +A+    +G+ IV+T GTA  +E  GI V  V K+ 
Sbjct: 944  GSRLPEKGTVLMTVKDSDKPRAIEVARTLHTLGYPIVATRGTASAIEAAGIPVRVVNKVK 1003

Query: 1095 EGRPHAGDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAI 1154
            +GRPH  DM+ NG++ ++  T         D   +R   LA +V   TT++GA A  E +
Sbjct: 1004 DGRPHIVDMIKNGELALVFTTVDETRAAIADSRSIRTAALANRVTYYTTIAGARAAVEGL 1063

Query: 1155 RSLKS 1159
            + L++
Sbjct: 1064 KHLQN 1068


>gi|323497906|ref|ZP_08102915.1| carbamoyl phosphate synthase large subunit [Vibrio sinaloensis DSM
            21326]
 gi|323316951|gb|EGA69953.1| carbamoyl phosphate synthase large subunit [Vibrio sinaloensis DSM
            21326]
          Length = 1076

 Score = 1232 bits (3187), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 616/1065 (57%), Positives = 782/1065 (73%), Gaps = 22/1065 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTDL+ ILILGAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDLKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPDMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  E+V +++EKERPDA+LPTMGGQTALN A+ L + G LE++GVE+IGA  DA
Sbjct: 63   ATYIEPIQWEVVRKIIEKERPDAVLPTMGGQTALNCALDLEKHGVLEEFGVEMIGATADA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  F +AMK+IG++ P +    +++E   + + +G FP IIRP+FT+GGTGGGI
Sbjct: 123  IDKAEDRSRFDKAMKSIGLECPRADTAKSMEEAYKVLDMVG-FPCIIRPSFTMGGTGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYNKEEFE IC+ GL  S T+++L+++SL+GWKEYE+EV+RD ADN +I+CSIEN DPMG
Sbjct: 182  AYNKEEFEEICRRGLDLSPTNELLIDESLIGWKEYEMEVVRDKADNCIIVCSIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            +HTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGVE GGSNVQF +NP DG +++IEMN
Sbjct: 242  IHTGDSITVAPAQTLTDKEYQLMRNASLAVLREIGVETGGSNVQFGINPKDGRMVIIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VG++LD++ NDIT   TPASFEP+IDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKIAAKLAVGFTLDELQNDITGGATPASFEPTIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWD- 505
            F FEKF G+   LTTQMKSVGE MA+GR  QES QKALR LE G +G+    + +LD   
Sbjct: 362  FNFEKFAGANDRLTTQMKSVGEVMAIGRNQQESLQKALRGLEVGVNGF--DEMVDLDAPD 419

Query: 506  -WEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQ 564
               ++++ L+    +R+  I  A + GM VD +  L+ ID+WFL Q +EL+++E  +   
Sbjct: 420  ALTKIRHELKEAGAERIWYIADAFRAGMSVDGVFNLTAIDRWFLVQIEELVNLENQVKAG 479

Query: 565  SVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEAN 624
              + +T+D   ++KR+GFSD +++      E E+R  R +  + P YKRVDTCAAEF ++
Sbjct: 480  GFAGLTQDVLRKMKRKGFSDARLSTILGVAESEIRRLRDTYDIHPVYKRVDTCAAEFSSD 539

Query: 625  TPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMN 684
            T YMYSSYD ECE+ PT K K+++LGGGPNRIGQGIEFDYCC H S +L+  GYETIM+N
Sbjct: 540  TAYMYSSYDEECEAQPTDKDKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVN 599

Query: 685  SNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDE 744
             NPETVSTDYDTSDRLYFEP+T+EDVL+++ +E+P+G+IVQ+GGQTPLKL+         
Sbjct: 600  CNPETVSTDYDTSDRLYFEPVTLEDVLSIVRVEKPKGVIVQYGGQTPLKLA--------- 650

Query: 745  HRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKE 804
             R   A+G   V I GTSPD+ID AEDRERF A +  L + QP+     +   A+  ++E
Sbjct: 651  -RALEAAG---VPIIGTSPDAIDRAEDRERFQAAVDRLGLLQPENATVTTIDQAVEKSRE 706

Query: 805  IGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDAL 864
            IG+P+VVRPSYVLGGRAMEIVY ++ L  Y   AV V  E PVL+D++L DA E+D+DA+
Sbjct: 707  IGFPLVVRPSYVLGGRAMEIVYDEQDLRRYFNEAVSVSNESPVLLDRFLDDATEVDIDAI 766

Query: 865  ADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLM 924
             D    VVIGGIMEHIEQAGVHSGDSAC +P  T+S    D +     KLA  L V GLM
Sbjct: 767  CDG-ERVVIGGIMEHIEQAGVHSGDSACSLPAYTLSQEIQDKMREQVEKLAFELGVRGLM 825

Query: 925  NCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIP 984
            N Q+A+  + +VYL+E NPRA+RTVPFVSKA G PLAK AA VM+G+SL   GFTKE+IP
Sbjct: 826  NTQFAVKDN-EVYLIEVNPRAARTVPFVSKATGAPLAKIAARVMAGQSLESQGFTKEIIP 884

Query: 985  KHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTV 1044
             + SVKE VLPF KF G D LLGPEMRSTGEVMG+  +F  A+AKA++  G   P  G  
Sbjct: 885  PYYSVKEVVLPFNKFPGVDPLLGPEMRSTGEVMGVGATFAEAYAKAELGCGAVYPEGGRA 944

Query: 1045 FLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMV 1104
             LS+ +  K  +  +A     +G+++ +T GTA  L   GI    V K+HEGRPH  D +
Sbjct: 945  LLSVREGDKQRVVDLASKLTKLGYQLDATHGTAVILGEAGINPRLVNKVHEGRPHILDRI 1004

Query: 1105 ANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALA 1149
             N +   +V T++G    + D   LRR  LA KV   TT++ A A
Sbjct: 1005 KNNEYTYIVNTAAGRQAIE-DSKVLRRGALAEKVNYTTTLNAAFA 1048



 Score =  260 bits (665), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 165/429 (38%), Positives = 248/429 (57%), Gaps = 26/429 (6%)

Query: 67  KIDS-SAELSNGAA---SSKDQKL-GKRTDLRKILILGAGPIVIGQACEFDYSGTQACKA 121
           ++D+ +AE S+  A   SS D++   + TD  KI++LG GP  IGQ  EFDY    A  A
Sbjct: 528 RVDTCAAEFSSDTAYMYSSYDEECEAQPTDKDKIMVLGGGPNRIGQGIEFDYCCVHASLA 587

Query: 122 LKEEGYEVILINSNPATIMTDPGLADRTYITPMTPELVEQVLEKERPDALLPTMGGQTAL 181
           L+E+GYE I++N NP T+ TD   +DR Y  P+T E V  ++  E+P  ++   GGQT L
Sbjct: 588 LREDGYETIMVNCNPETVSTDYDTSDRLYFEPVTLEDVLSIVRVEKPKGVIVQYGGQTPL 647

Query: 182 NLAVALAESGALEKYGVELIGAKLDAIKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECI 241
            LA       ALE  GV +IG   DAI +AEDR+ F+ A+  +G+  P +    T+D+ +
Sbjct: 648 KLA------RALEAAGVPIIGTSPDAIDRAEDRERFQAAVDRLGLLQPENATVTTIDQAV 701

Query: 242 SIANEIGEFPLIIRPAFTLGGTGGGIAYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKE 301
             + EIG FPL++RP++ LGG    I Y++++        ++ S  S VL+++ L    E
Sbjct: 702 EKSREIG-FPLVVRPSYVLGGRAMEIVYDEQDLRRYFNEAVSVSNESPVLLDRFLDDATE 760

Query: 302 YELEVMRDLADNVVIICSIENVDPMGVHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREI 361
            +++ + D  + VVI   +E+++  GVH+GDS    PA TL+ +   ++R+    +  E+
Sbjct: 761 VDIDAICD-GERVVIGGIMEHIEQAGVHSGDSACSLPAYTLSQEIQDKMREQVEKLAFEL 819

Query: 362 GVECGGSNVQFAVNPVDGEVMVIEMNPRVSRSSALASKATGFPIAKMAAKLSVGYSLDQI 421
           GV  G  N QFAV   D EV +IE+NPR +R+    SKATG P+AK+AA++  G SL+  
Sbjct: 820 GVR-GLMNTQFAVK--DNEVYLIEVNPRAARTVPFVSKATGAPLAKIAARVMAGQSLES- 875

Query: 422 PNDITKKTPASFEPSIDYVVTKIPRFAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQ 481
               TK+    +     Y V ++    F KFPG +PLL  +M+S GE M +G TF E++ 
Sbjct: 876 -QGFTKEIIPPY-----YSVKEVV-LPFNKFPGVDPLLGPEMRSTGEVMGVGATFAEAYA 928

Query: 482 KALRSLECG 490
           KA   L CG
Sbjct: 929 KA--ELGCG 935


>gi|406830177|ref|ZP_11089771.1| carbamoyl-phosphate synthase large subunit [Schlesneria paludicola
            DSM 18645]
          Length = 1096

 Score = 1232 bits (3187), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 632/1106 (57%), Positives = 803/1106 (72%), Gaps = 41/1106 (3%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            +R D+ KILI+G+GPIVIGQACEFDYSGTQACKAL+EEGY V+L+NSNPATIMTDP +AD
Sbjct: 3    RRDDIHKILIIGSGPIVIGQACEFDYSGTQACKALREEGYIVVLVNSNPATIMTDPEMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
            RTYI P+  E V +++E ERPDALLPT+GGQT LN+A+ L   G LEKYGVE++GA++D 
Sbjct: 63   RTYIEPINWEYVAKIIEVERPDALLPTLGGQTGLNVAMDLVRHGVLEKYGVEMLGARVDV 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            IKKAE+RD FKQAM  IG++   S I + +DE      EIG  P+IIR +FTLGG GGGI
Sbjct: 123  IKKAEERDTFKQAMIKIGLEVCRSRIVHNIDEARLALEEIG-LPMIIRASFTLGGVGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN++EFE   + GL  S   +VL+++S++GWKEYE+EVMRD ADNVVIIC+IEN DPMG
Sbjct: 182  AYNRDEFEEKVRKGLELSPVHEVLLDESIIGWKEYEMEVMRDNADNVVIICAIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTL+DKEYQR+RD +IA++REIGVE GGSNVQFA+NP DG ++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLSDKEYQRMRDATIAVMREIGVETGGSNVQFAINPRDGRMVVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRF 447
            PRVSRSSALASKATGFPIAK+AAKL+VGY LD+I NDIT++T A FEP+IDYVVTKIPR+
Sbjct: 302  PRVSRSSALASKATGFPIAKIAAKLAVGYRLDEIQNDITRETLACFEPTIDYVVTKIPRW 361

Query: 448  AFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDW--- 504
             FEKFP ++  LT QMKSVGE MA+GRTFQES QKALR LE G  G G    K+L W   
Sbjct: 362  TFEKFPDADSELTVQMKSVGETMAIGRTFQESLQKALRGLEIGHFGLGGGK-KDL-WGTP 419

Query: 505  ---DWEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFL 561
                 ++L+  L  PN  RM  I  A K GM V +++EL+ ID WFL Q + LI VE  +
Sbjct: 420  KQPSRDELESMLSRPNEQRMFYIRYAFKAGMSVADVYELTNIDPWFLDQIRNLIVVENEI 479

Query: 562  LTQS-VSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAE 620
               S + ++  +   + KR G+SD+Q+AF    TE +VR +R  LG++ ++K+VDTCAAE
Sbjct: 480  REFSNLEDVPIELLRKAKRHGYSDQQLAFWWDETEMDVRARRKELGIVATFKQVDTCAAE 539

Query: 621  FEANTPYMYSSYDFECES-APTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYE 679
            FEA TPY YS+Y+ E E+ A   KK+++ILGGGPNRIGQGIEFDYCCC  SF+L+  G E
Sbjct: 540  FEAYTPYYYSTYESEDETPAKGDKKRIIILGGGPNRIGQGIEFDYCCCQASFALRELGIE 599

Query: 680  TIMMNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIH 739
            +IM+NSNPETVSTDYDTSD L+FEPLT EDVLN+ D  +P+G+IVQFGGQTPL L+    
Sbjct: 600  SIMVNSNPETVSTDYDTSDLLFFEPLTTEDVLNICDRMQPDGVIVQFGGQTPLNLA---- 655

Query: 740  QYLDEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADAL 799
                  R   A+G   V+I GTSPD IDAAEDR+RF  I++ + + QP  G A     A 
Sbjct: 656  ------RGLEAAG---VKIIGTSPDMIDAAEDRKRFQGILERIGLRQPPNGTAFDAQGAR 706

Query: 800  AIAKEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEI 859
             IA EIGYPV++RPS+VLGGRAMEI Y +ET+  Y+  AV V P+RPVL+DK+L DA+E+
Sbjct: 707  LIANEIGYPVLIRPSFVLGGRAMEICYDEETVTKYMNEAVNVSPDRPVLVDKFLEDAVEV 766

Query: 860  DVDALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLN 919
            DVDA++D    +V GG+MEHIE+AGVHSGDSA ++P  ++    ++ I   T  LA+ LN
Sbjct: 767  DVDAISDGKLTLV-GGVMEHIEEAGVHSGDSASVLPPYSLPQEVIEEIKQATYALARELN 825

Query: 920  VCGLMNCQYAITTSGD--------------VYLLEANPRASRTVPFVSKAIGHPLAKYAA 965
            V GLMN Q+A+  + D              VY+LE NPRASRT PFVSKA    LAK AA
Sbjct: 826  VRGLMNIQFAVKRAPDATQPGVTGTPSEYVVYILEVNPRASRTSPFVSKATNVSLAKIAA 885

Query: 966  LVMSGKSLNDLGFTKEVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPI 1025
             +M+  SL + G T+EV+P + SVKE+V PF +F G D++LGPEM+STGEVMGI   FPI
Sbjct: 886  KIMANVSLEEQGVTREVVPTYTSVKESVFPFNRFLGVDIILGPEMKSTGEVMGISNEFPI 945

Query: 1026 AFAKAQIAAGQKLPLSGTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGI 1085
            AFAK+QIAAG KLP SGTVF+SL+   K  L    +    +GFKI+ TSGTA      G+
Sbjct: 946  AFAKSQIAAGNKLPKSGTVFISLSGPHKHALIDQVRRLQGLGFKILCTSGTARVFREYGL 1005

Query: 1086 AVERVLKMHEGRPHAGDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVS 1145
             V+ V K+ EGRP+  D +AN +I ++  T SG      +G ++R   +   +P +TT+ 
Sbjct: 1006 EVDTVKKLQEGRPNLLDYMANKEIALIFNTPSGKGARTDEG-RIRSASVVNAIPCVTTLP 1064

Query: 1146 GALANAEAIRSLKSN-TVTMTALQDF 1170
            G +A  +A+ +L+ + T  + A+QD+
Sbjct: 1065 GCIAFVQALEALREHPTPEVKAIQDW 1090


>gi|377555445|ref|ZP_09785173.1| carbamoyl-phosphate synthase large subunit [endosymbiont of
            Bathymodiolus sp.]
          Length = 1069

 Score = 1231 bits (3186), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 612/1074 (56%), Positives = 785/1074 (73%), Gaps = 26/1074 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KR D++ ILI+GAGPIVIGQACEFDYSG QAC AL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRQDIKSILIIGAGPIVIGQACEFDYSGAQACTALREEGYRVILVNSNPATIMTDPQMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+    VE+++E E+PDALLPTMGGQTALN A+ L   G LEK+GVE+IGAK +A
Sbjct: 63   STYIEPIEWRTVEKIIEIEKPDALLPTMGGQTALNCALDLERHGVLEKHGVEMIGAKKEA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDRDLF++AM  IG+  P + + + ++E  +I   +G FP +IRP+FT+GG+GGGI
Sbjct: 123  IDKAEDRDLFREAMLKIGLDMPKAAVAHNMEEAFTIQETVG-FPTVIRPSFTMGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYNK+EF  IC+ GL  S T+++LVE+S+LGWKE+E+EV+RD  DN +IICSIEN DPMG
Sbjct: 182  AYNKQEFVEICERGLDLSPTNELLVEESILGWKEFEMEVVRDTKDNCIIICSIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            +HTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGV+ GGSNVQFA+NP DG + +IEMN
Sbjct: 242  IHTGDSITVAPAQTLTDKEYQVMRNASLAVLREIGVDTGGSNVQFALNPKDGRLTIIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT  KTPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGYTLDELDNDITGGKTPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            FAFEKFP ++  LTTQMKSVGE MA+G TFQES QKALR LE    G        +D   
Sbjct: 362  FAFEKFPKADDRLTTQMKSVGEVMAMGSTFQESLQKALRGLETDKVGLD----PMVDLGA 417

Query: 507  EQLKYSLR----VPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLL 562
            +  K  +R        +R+  +  A + GM +DE+ +LS +D WFL Q ++++  E  + 
Sbjct: 418  DDAKNKIRSECITARGERIFYLADAFRLGMSLDEVFDLSKVDPWFLAQIQDIVSSEMQVN 477

Query: 563  TQSVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFE 622
              +++++   + + +KR+GFSD ++A     +E  VRE+R +L V P +KRVD+CAAEF+
Sbjct: 478  GSNITDIDARELFLLKRKGFSDARLAQLCNCSESSVRERRKALNVKPVFKRVDSCAAEFD 537

Query: 623  ANTPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIM 682
              T Y+YS+Y  +CE+ PT KKK++ILGGGPNRIGQGIEFDYCC H S +L++ GYETIM
Sbjct: 538  TQTAYLYSTYQQQCEANPTDKKKIMILGGGPNRIGQGIEFDYCCVHASLALRADGYETIM 597

Query: 683  MNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYL 742
            +N NPETVSTDYD SDRLYFEPLT+EDVL VID+E P+GIIV +GGQTPLKL+  + +  
Sbjct: 598  VNCNPETVSTDYDISDRLYFEPLTLEDVLAVIDIENPDGIIVHYGGQTPLKLAAALEK-- 655

Query: 743  DEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIA 802
                    SG    +I GTSP++ID AEDRERF+ +++EL ++QP  G A+S   A  IA
Sbjct: 656  --------SG---AKIIGTSPNAIDLAEDRERFSQMLQELELKQPLNGTARSLEQAQDIA 704

Query: 803  KEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVD 862
              IG+P+VVRPSYVLGGRAMEIVY  ++L  Y+  AV+V  + PVL+D +L  AIE+D+D
Sbjct: 705  DAIGFPLVVRPSYVLGGRAMEIVYDKDSLDHYMHTAVQVSNDSPVLLDSFLDHAIEVDID 764

Query: 863  ALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCG 922
             ++D   +VVIGGIM+HIEQAG+HSGDSAC +P  ++ +  LD +    I +AK+L V G
Sbjct: 765  VISDG-EDVVIGGIMQHIEQAGIHSGDSACSLPPYSLPNDVLDEMREQVIAMAKKLGVIG 823

Query: 923  LMNCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEV 982
            LMN Q A     ++Y++E NPRASRTVPFVSKAIG PLA  AA VMSGK+L  L FT E+
Sbjct: 824  LMNTQLAYQDD-EIYIIEVNPRASRTVPFVSKAIGVPLANIAARVMSGKTLKALNFTTEI 882

Query: 983  IPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSG 1042
            IP+H SVKEAV PF KF G D +LGPEMRSTGEVMG+   F  AF KAQ+AAG   P  G
Sbjct: 883  IPQHFSVKEAVFPFNKFLGVDPILGPEMRSTGEVMGVGDDFASAFDKAQLAAGSHAPTEG 942

Query: 1043 TVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGD 1102
             VF+SL  L +  L  + K     GF +V+T      L   G+  E V K+ EG PH  D
Sbjct: 943  KVFISLRKLDRDDLVELGKRLASQGFSLVATRSNKDALVEAGLECETVNKVSEGSPHIVD 1002

Query: 1103 MVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRS 1156
            M+ N QI  ++I S+ D+    D  ++R++ L +KV   TTV+ A A  + +++
Sbjct: 1003 MIKNDQID-LIINSTEDTQGAEDAAEIRQQALVHKVVCTTTVAAAFAILDGLKA 1055


>gi|27364027|ref|NP_759555.1| carbamoyl phosphate synthase large subunit [Vibrio vulnificus CMCP6]
 gi|37678809|ref|NP_933418.1| carbamoyl phosphate synthase large subunit [Vibrio vulnificus YJ016]
 gi|320157410|ref|YP_004189789.1| carbamoyl-phosphate synthase large subunit [Vibrio vulnificus
            MO6-24/O]
 gi|31340016|sp|Q8DEM2.1|CARB_VIBVU RecName: Full=Carbamoyl-phosphate synthase large chain; AltName:
            Full=Carbamoyl-phosphate synthetase ammonia chain
 gi|71152356|sp|Q7MNU0.1|CARB_VIBVY RecName: Full=Carbamoyl-phosphate synthase large chain; AltName:
            Full=Carbamoyl-phosphate synthetase ammonia chain
 gi|27360144|gb|AAO09082.1| Carbamoyl-phosphate synthase large chain [Vibrio vulnificus CMCP6]
 gi|37197550|dbj|BAC93389.1| carbamoylphosphate synthase large subunit [Vibrio vulnificus YJ016]
 gi|319932722|gb|ADV87586.1| carbamoyl-phosphate synthase large chain [Vibrio vulnificus MO6-24/O]
          Length = 1077

 Score = 1231 bits (3186), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 616/1065 (57%), Positives = 780/1065 (73%), Gaps = 22/1065 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILILGAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIQSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPDMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  E+V +++EKERPDA+LPTMGGQTALN A+AL + G L ++GVE+IGA  DA
Sbjct: 63   ATYIEPIQWEVVRKIIEKERPDAVLPTMGGQTALNCALALEKHGVLAEFGVEMIGATADA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  F +AMK+IG++ P +    T++E   + + +G FP IIRP+FT+GGTGGGI
Sbjct: 123  IDKAEDRSRFDKAMKSIGLECPRADTAKTMEEAYKVLDMVG-FPCIIRPSFTMGGTGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYNKEEFE IC+ GL  S T+++L+++SL+GWKEYE+EV+RD ADN +I+CSIEN DPMG
Sbjct: 182  AYNKEEFEEICRRGLDLSPTNELLIDESLIGWKEYEMEVVRDKADNCIIVCSIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            +HTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGVE GGSNVQF +NP DG +++IEMN
Sbjct: 242  IHTGDSITVAPAQTLTDKEYQLMRNASLAVLREIGVETGGSNVQFGINPKDGRMVIIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VG++LD++ NDIT   TPASFEP+IDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKIAAKLAVGFTLDELQNDITGGATPASFEPTIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWD- 505
            F FEKF G+   LTTQMKSVGE MA+GR  QES  KALR LE G +G+    + +LD   
Sbjct: 362  FNFEKFAGANDRLTTQMKSVGEVMAIGRNQQESLHKALRGLEVGATGF--DEMVDLDSPD 419

Query: 506  -WEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQ 564
               ++++ L+    +R+  I  A + GM VD +  L+ ID+WFL Q +E++ +E+ +   
Sbjct: 420  ALTKIRHELKEAGAERIWYIADAFRAGMSVDGVFNLTNIDRWFLVQIEEIVKLEEQVKAG 479

Query: 565  SVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEAN 624
              + +T+D   ++KR+GFSD +++      E E+R  R    + P YKRVDTCAAEF ++
Sbjct: 480  GFAGLTQDVLRQMKRKGFSDARLSKLLGVAESEIRRLRDQFDIHPVYKRVDTCAAEFSSD 539

Query: 625  TPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMN 684
            T YMYSSYD ECE+ PT K+K+++LGGGPNRIGQGIEFDYCC H S +L+  GYETIM+N
Sbjct: 540  TAYMYSSYDDECEANPTDKEKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVN 599

Query: 685  SNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDE 744
             NPETVSTDYDTSDRLYFEP+T+EDVL +  +E+P+G+IVQ+GGQTPLKL+         
Sbjct: 600  CNPETVSTDYDTSDRLYFEPVTLEDVLAIARVEKPKGVIVQYGGQTPLKLA--------- 650

Query: 745  HRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKE 804
             R   A+G   V I GTSPD+ID AEDRERF   +  L + QP+     +   A+  ++E
Sbjct: 651  -RALEAAG---VPIIGTSPDAIDRAEDRERFQQAVDRLGLLQPENATVTTMEQAVEKSRE 706

Query: 805  IGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDAL 864
            IG+P+VVRPSYVLGGRAMEIVY ++ L  Y   AV V  E PVL+D++L DAIE+D+DA+
Sbjct: 707  IGFPLVVRPSYVLGGRAMEIVYDEQDLRRYFNEAVSVSNESPVLLDRFLDDAIEVDIDAI 766

Query: 865  ADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLM 924
             D    VVIGGIMEHIEQAGVHSGDSAC +P  T+S    D +     KLA  L V GLM
Sbjct: 767  CDG-ERVVIGGIMEHIEQAGVHSGDSACSLPAYTLSQEIQDKMREQVEKLAFELGVRGLM 825

Query: 925  NCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIP 984
            N Q+A+  + +VYL+E NPRA+RTVPFVSKA G PLAK AA VM+G+SL   GFTKE+IP
Sbjct: 826  NTQFAVKDN-EVYLIEVNPRAARTVPFVSKATGAPLAKIAARVMAGQSLESQGFTKEIIP 884

Query: 985  KHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTV 1044
             + SVKE VLPF KF G D LLGPEMRSTGEVMG+  +F  A+AKA++  G   P  G  
Sbjct: 885  PYYSVKEVVLPFNKFPGVDPLLGPEMRSTGEVMGVGATFAEAYAKAELGCGNVYPEGGRA 944

Query: 1045 FLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMV 1104
             LS+ +  K  +  +A   L +G+K+ +T GTA  L   GI    V K+HEGRPH  D +
Sbjct: 945  LLSVREGDKQRVVDLASKLLKLGYKLDATHGTAVILGEAGINPRLVNKVHEGRPHILDRI 1004

Query: 1105 ANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALA 1149
             N +   +V T++G    + D   LRR  LA KV   TT++ A A
Sbjct: 1005 KNNEYTYIVNTAAGRQAIE-DSKVLRRGALAEKVNYTTTLNAAFA 1048



 Score =  261 bits (668), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 176/485 (36%), Positives = 264/485 (54%), Gaps = 41/485 (8%)

Query: 67  KIDS-SAELSNGAA----SSKDQKLGKRTDLRKILILGAGPIVIGQACEFDYSGTQACKA 121
           ++D+ +AE S+  A    S  D+     TD  KI++LG GP  IGQ  EFDY    A  A
Sbjct: 528 RVDTCAAEFSSDTAYMYSSYDDECEANPTDKEKIMVLGGGPNRIGQGIEFDYCCVHASLA 587

Query: 122 LKEEGYEVILINSNPATIMTDPGLADRTYITPMTPELVEQVLEKERPDALLPTMGGQTAL 181
           L+E+GYE I++N NP T+ TD   +DR Y  P+T E V  +   E+P  ++   GGQT L
Sbjct: 588 LREDGYETIMVNCNPETVSTDYDTSDRLYFEPVTLEDVLAIARVEKPKGVIVQYGGQTPL 647

Query: 182 NLAVALAESGALEKYGVELIGAKLDAIKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECI 241
            LA       ALE  GV +IG   DAI +AEDR+ F+QA+  +G+  P +    T+++ +
Sbjct: 648 KLA------RALEAAGVPIIGTSPDAIDRAEDRERFQQAVDRLGLLQPENATVTTMEQAV 701

Query: 242 SIANEIGEFPLIIRPAFTLGGTGGGIAYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKE 301
             + EIG FPL++RP++ LGG    I Y++++        ++ S  S VL+++ L    E
Sbjct: 702 EKSREIG-FPLVVRPSYVLGGRAMEIVYDEQDLRRYFNEAVSVSNESPVLLDRFLDDAIE 760

Query: 302 YELEVMRDLADNVVIICSIENVDPMGVHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREI 361
            +++ + D  + VVI   +E+++  GVH+GDS    PA TL+ +   ++R+    +  E+
Sbjct: 761 VDIDAICD-GERVVIGGIMEHIEQAGVHSGDSACSLPAYTLSQEIQDKMREQVEKLAFEL 819

Query: 362 GVECGGSNVQFAVNPVDGEVMVIEMNPRVSRSSALASKATGFPIAKMAAKLSVGYSLDQI 421
           GV  G  N QFAV   D EV +IE+NPR +R+    SKATG P+AK+AA++  G SL+  
Sbjct: 820 GVR-GLMNTQFAVK--DNEVYLIEVNPRAARTVPFVSKATGAPLAKIAARVMAGQSLES- 875

Query: 422 PNDITKKTPASFEPSIDYVVTKIPRFAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQ 481
               TK+    +     Y V ++    F KFPG +PLL  +M+S GE M +G TF E++ 
Sbjct: 876 -QGFTKEIIPPY-----YSVKEVV-LPFNKFPGVDPLLGPEMRSTGEVMGVGATFAEAYA 928

Query: 482 KALRSLECGFSGWGCSNVKELDWDWEQLKYSLRVPNPDRMQAIYAA---MKKGMKVDEIH 538
           KA           GC NV       E  +  L V   D+ + +  A   +K G K+D  H
Sbjct: 929 KA---------ELGCGNVYP-----EGGRALLSVREGDKQRVVDLASKLLKLGYKLDATH 974

Query: 539 ELSFI 543
             + I
Sbjct: 975 GTAVI 979


>gi|299066488|emb|CBJ37678.1| Carbamoyl-phosphate synthase large chain (Carbamoyl-phosphate
            synthetase ammonia chain) [Ralstonia solanacearum CMR15]
          Length = 1081

 Score = 1231 bits (3186), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 620/1085 (57%), Positives = 806/1085 (74%), Gaps = 32/1085 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILI+GAGPI+IGQACEFDYSG QACKAL+EEG++V+L+NSNPATIMTDP  AD
Sbjct: 3    KRTDIKTILIIGAGPIIIGQACEFDYSGAQACKALREEGFKVVLVNSNPATIMTDPSTAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+T E+VE+++ KERPDA+LPTMGGQTALN A+ L   G LEKY VELIGA  +A
Sbjct: 63   VTYIEPITWEVVERIIAKERPDAILPTMGGQTALNCALDLHRHGVLEKYNVELIGASPEA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEI------GEFPLIIRPAFTLG 261
            I KAEDR  FK+AM  IG+ +  SGI ++L+E +++  +I      G +P++IRP+FTLG
Sbjct: 123  IDKAEDRQKFKEAMTKIGLGSAKSGIAHSLEEALAVQAQIARETNTGGYPIVIRPSFTLG 182

Query: 262  GTGGGIAYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIE 321
            GTGGGIAYN+EEFE ICK GL  S T+++L+E+SLLGWKEYE+EV+RD ADN +I+CSIE
Sbjct: 183  GTGGGIAYNREEFEEICKRGLDLSPTNELLIEESLLGWKEYEMEVVRDKADNCIIVCSIE 242

Query: 322  NVDPMGVHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEV 381
            N+DPMG+HTGDSITVAPAQTLTDKEYQ LR+ S+A++REIGV+ GGSNVQF++NP DG +
Sbjct: 243  NLDPMGIHTGDSITVAPAQTLTDKEYQILRNASLAVLREIGVDTGGSNVQFSINPEDGRM 302

Query: 382  MVIEMNPRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYV 440
            +VIEMNPRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ N+IT   TPASFEPSIDYV
Sbjct: 303  IVIEMNPRVSRSSALASKATGFPIAKVAAKLAVGYTLDELKNEITGGATPASFEPSIDYV 362

Query: 441  VTKIPRFAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVK 500
            VTK+PRFAFEKFP ++  LTTQMKSVGE MA+GRTFQESFQKALR LE G  G     + 
Sbjct: 363  VTKVPRFAFEKFPQADSHLTTQMKSVGEVMAMGRTFQESFQKALRGLEVGVDG-----LD 417

Query: 501  ELDWDWEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQF 560
            E   D +++   +    PDR+  +  A + G+ +DE++  + +D WFL Q ++++  E  
Sbjct: 418  EKSADRDEVIREIGEAGPDRIWYLGDAFRLGLSIDEVYAETAVDPWFLAQIEDIVKTEAL 477

Query: 561  LLTQSVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAE 620
            +  +++ +++  +   +K++GFSD+++A   K+T + VREKR++  V P YKRVDTCAAE
Sbjct: 478  VKARTLDSLSAAELRLLKQKGFSDRRLAKLMKTTAQAVREKRIAEKVRPVYKRVDTCAAE 537

Query: 621  FEANTPYMYSSYDF---ECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAG 677
            F  NT Y+YS+Y+    ECE+ PT +KK+++LGGGPNRIGQGIEFDYCC H + +L   G
Sbjct: 538  FATNTAYLYSTYEAEHGECEADPTDRKKIMVLGGGPNRIGQGIEFDYCCVHAALALHEDG 597

Query: 678  YETIMMNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLP 737
            YETIM+N NPETVSTDYDTSDRLYFEP+T+EDVL ++D E+P G+IVQ+GGQTPLKL+L 
Sbjct: 598  YETIMVNCNPETVSTDYDTSDRLYFEPVTLEDVLEIVDKEKPVGVIVQYGGQTPLKLALD 657

Query: 738  IHQYLDEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEAD 797
            +           A+G   V I GT+PD IDAAEDRERF  ++ +L + QP    A++E +
Sbjct: 658  LE----------ANG---VPIIGTTPDMIDAAEDRERFQKLLHDLGLRQPPNRTARAEDE 704

Query: 798  ALAIAKEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAI 857
            AL +A EIGYP+VVRPSYVLGGRAMEIV+    L  Y+  AV+V  + PVL+D++L+DAI
Sbjct: 705  ALKLADEIGYPLVVRPSYVLGGRAMEIVHEPRDLERYMREAVKVSNDSPVLLDRFLNDAI 764

Query: 858  EIDVDALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKR 917
            E DVD L+D    V IGG+MEHIEQAGVHSGDSAC +P  ++S + +D +   T  +A+ 
Sbjct: 765  ECDVDCLSDG-KRVFIGGVMEHIEQAGVHSGDSACSLPPYSLSQATVDELKRQTAAMARA 823

Query: 918  LNVCGLMNCQYAITTSGD---VYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLN 974
            LNV GLMN Q+AI   G    VY+LE NPRASRTVP+VSKA G  LAK AA  M+G+SL+
Sbjct: 824  LNVIGLMNVQFAIQQRGGEDIVYVLEVNPRASRTVPYVSKATGISLAKVAARCMAGQSLD 883

Query: 975  DLGFTKEVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAA 1034
            + G   EV+P + SVKEAV PF KF G D +LGPEMRSTGEVMG+  +F  A  K+Q+AA
Sbjct: 884  EQGIHDEVVPSYYSVKEAVFPFNKFPGVDPVLGPEMRSTGEVMGVGRTFGEALFKSQLAA 943

Query: 1035 GQKLPLSGTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMH 1094
            G +LP  GTV +++ D  KP    +A+    +G+ IV+T GTA  +E  GI V  V K+ 
Sbjct: 944  GSRLPEKGTVLMTVKDSDKPRAIEVARTLHTLGYPIVATRGTASAIEAAGIPVRVVNKVK 1003

Query: 1095 EGRPHAGDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAI 1154
            +GRPH  DM+ NG++ ++  T         D   +R   LA +V   TT++GA A  E +
Sbjct: 1004 DGRPHIVDMIKNGELALVFTTVDETRAAIADSRSIRTAALANRVTYYTTIAGARAAVEGL 1063

Query: 1155 RSLKS 1159
            + L++
Sbjct: 1064 KHLQN 1068


>gi|393764333|ref|ZP_10352945.1| carbamoyl phosphate synthase large subunit [Alishewanella agri BL06]
 gi|392604963|gb|EIW87862.1| carbamoyl phosphate synthase large subunit [Alishewanella agri BL06]
          Length = 1073

 Score = 1231 bits (3186), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 626/1083 (57%), Positives = 782/1083 (72%), Gaps = 19/1083 (1%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTDL+ ILILGAGPIVIGQACEFDYSG QACKALKEEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDLKSILILGAGPIVIGQACEFDYSGAQACKALKEEGYRVILVNSNPATIMTDPEMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  ++VE+++EKERP A+LPTMGGQTALN A+ L   G L KY VE+IGA  DA
Sbjct: 63   ATYIEPIHWQVVEKIIEKERPCAVLPTMGGQTALNCALDLERHGVLAKYNVEMIGATADA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  F +AM++IG+  P +G+ ++++E   +   IG FP IIRP+FT+GG+GGGI
Sbjct: 123  IDKAEDRSRFDKAMRSIGLACPRAGLAHSMEEAYQVLETIG-FPCIIRPSFTMGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEFE IC  GL  S T ++L+++SL+GWKEYE+EV+RD  DN +I+CSIEN DPMG
Sbjct: 182  AYNREEFEEICTRGLDLSPTKELLIDESLIGWKEYEMEVVRDKNDNCIIVCSIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGVE GGSNVQF +NPVDG +++IEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQIMRNASLAVLREIGVETGGSNVQFGINPVDGRMVIIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKK-TPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT   TPASFEPSIDYVVTK+PR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGYTLDELANDITGGVTPASFEPSIDYVVTKVPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            F FEKF G+   LTTQMKSVGE MA+GR  QES QKALR LE G SG             
Sbjct: 362  FNFEKFAGANDRLTTQMKSVGEVMAIGRNQQESLQKALRGLEIGVSGLDPIIDINASEAK 421

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
            E++   LR P   R+  I  A + GM +DEI  L+ ID WFL Q ++L+  EQ L     
Sbjct: 422  EKIIRELREPGAHRIWYIADAFRFGMSMDEIFTLTKIDPWFLIQIEDLVKEEQALSVDGF 481

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
            + + +     +KR+GF+DK+IA     +E EVR+KR S  + P YKRVDTCAAEF +NT 
Sbjct: 482  AALDETRIARLKRKGFADKRIAEVLGVSETEVRKKRYSYNIHPVYKRVDTCAAEFASNTA 541

Query: 627  YMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSN 686
            YMYS+YD ECE+AP+ + K++I+GGGPNRIGQGIEFDYCC H + +L+  GYETIM+N N
Sbjct: 542  YMYSTYDEECEAAPSNRDKIMIIGGGPNRIGQGIEFDYCCVHAALALREDGYETIMVNCN 601

Query: 687  PETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHR 746
            PETVSTDYDTSDRLYFEP+T+EDVL ++  E+P+G+IVQ+GGQTPLKL+          R
Sbjct: 602  PETVSTDYDTSDRLYFEPITLEDVLEIVRKEQPKGVIVQYGGQTPLKLA----------R 651

Query: 747  LPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEIG 806
               A+G   V I GTSPD+ID AEDRERF   +  L ++QPK     S  +ALA A EIG
Sbjct: 652  ALEANG---VPIIGTSPDAIDRAEDRERFQQAVNRLGLKQPKNVTVTSFDEALAKAPEIG 708

Query: 807  YPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALAD 866
            YP+VVRPSYVLGGRAMEIVY ++ L  Y+  AV V  + PVL+D +L DAIE+D+DA+ D
Sbjct: 709  YPMVVRPSYVLGGRAMEIVYDEQDLRRYMNEAVSVSNDSPVLLDNFLDDAIEVDIDAICD 768

Query: 867  SCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNC 926
                VVIGGIMEHIEQAGVHSGDSAC +P  ++S    D +     KLA  L V GLMN 
Sbjct: 769  G-KEVVIGGIMEHIEQAGVHSGDSACTLPPHSLSQQIQDLMREQVRKLALELGVVGLMNT 827

Query: 927  QYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPKH 986
            Q+A+   G+VYL+E NPRA+RTVPFVSKA G  +AK  A  M+G+SL + G TKE+IP +
Sbjct: 828  QFAV-KDGEVYLIEVNPRAARTVPFVSKATGVAVAKVGARCMAGRSLAEQGITKEIIPPY 886

Query: 987  VSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVFL 1046
             SVKE V+PF KF G D +LGPEMRSTGEVMG+  +F  AFAKA++  G  +P  G   L
Sbjct: 887  FSVKEVVIPFNKFPGVDPILGPEMRSTGEVMGVGDTFEEAFAKAELGCGIVIPTGGRALL 946

Query: 1047 SLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVAN 1106
            S+ D  K  +  +AK  ++ GF++ ++ GTA  L+  GI    V K+ EGRP+  D + N
Sbjct: 947  SVRDSDKVRVVELAKRMVESGFELDASGGTATALKAAGIECRVVNKVFEGRPNMLDRIKN 1006

Query: 1107 GQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEA-IRSLKSNTVTMT 1165
            G+   +V T+ G    + D   LRR  L +KV   TT++ A A  +A   S  +N V++ 
Sbjct: 1007 GEYSYVVNTTEGRQAIE-DSKMLRRGALQHKVNYTTTLNAAFATVKANAASAFANVVSVQ 1065

Query: 1166 ALQ 1168
             L 
Sbjct: 1066 ELH 1068


>gi|378821942|ref|ZP_09844787.1| carbamoyl-phosphate synthase, large subunit [Sutterella parvirubra
            YIT 11816]
 gi|378599232|gb|EHY32275.1| carbamoyl-phosphate synthase, large subunit [Sutterella parvirubra
            YIT 11816]
          Length = 1080

 Score = 1231 bits (3186), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 627/1086 (57%), Positives = 791/1086 (72%), Gaps = 32/1086 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILI+GAGPIVIGQACEFDYSG QAC+ L+EEGY VIL+NSNPATIMTDP  AD
Sbjct: 3    KRTDIQSILIIGAGPIVIGQACEFDYSGVQACRVLREEGYRVILVNSNPATIMTDPQTAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+T E +E+++ KERPDA+LPTMGGQTALN A+ L   G LEKYGVELIGA  +A
Sbjct: 63   ATYIEPITWETLERIIAKERPDAILPTMGGQTALNCAMDLVNEGILEKYGVELIGASPEA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I+KAEDR+ FK  M  IG++   SG+ +TL+    +    G FP +IRP+FTLGGTGGGI
Sbjct: 123  IEKAEDRERFKALMGEIGLECARSGVAHTLEGAAEVLESTG-FPAVIRPSFTLGGTGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN EEF  I   GL  S T +VL+E+SLLGWKE+E+EV+RD ADN +I+CSIEN+DPMG
Sbjct: 182  AYNMEEFVEIVGRGLELSPTHEVLIEESLLGWKEFEMEVVRDKADNAIIVCSIENLDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTL+D+EYQ +RD S+A++R IGV+ GGSNVQFA++P  G ++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLSDREYQAMRDASMAVLRVIGVDTGGSNVQFALDPKTGRMIVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ ND+T  KTPASFEP+IDYVV K PR
Sbjct: 302  PRVSRSSALASKATGFPIAKIAAKLAVGYTLDELRNDMTGGKTPASFEPAIDYVVVKCPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            FAFEKFP ++  LTTQMKSVGE MA+GR+FQE+ QKALR LE G  G     +  +  D 
Sbjct: 362  FAFEKFPAADDRLTTQMKSVGEVMAIGRSFQEALQKALRGLETGKDG-----LTPVTTDK 416

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
             +L   L VP P+R+  +  AM+ GM +++IH  + ID WFL +  ELID+E+ +   ++
Sbjct: 417  TKLVRELSVPGPERLFWVADAMRLGMTLEDIHRHTKIDWWFLREIAELIDMEKAVEGHAL 476

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
            + +   D   +K  GFSDK+IA  T + E EVR  R + G+ P YKRVDTCAAEF   T 
Sbjct: 477  AEVDAADMRLLKAAGFSDKRIATLTGAKEAEVRAARQAFGIRPVYKRVDTCAAEFATTTA 536

Query: 627  YMYSSYDFE--CESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMN 684
            Y+YS+Y     CE+ PT KKKV++LGGGPNRIGQGIEFDYCC H + +L+  G+ETIM+N
Sbjct: 537  YLYSTYGSTELCEAEPTSKKKVMVLGGGPNRIGQGIEFDYCCVHAAMALREDGWETIMVN 596

Query: 685  SNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDE 744
             NPETVSTDYDTSDRLYFEP+T EDVL V + E+P+G+IVQ+GGQTPLK+          
Sbjct: 597  CNPETVSTDYDTSDRLYFEPVTFEDVLAVCEAEKPDGVIVQYGGQTPLKIC--------- 647

Query: 745  HRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKE 804
             R   A+G   V I GTSPD+ID AEDRERF A+I EL + QP   IA++E +AL  A E
Sbjct: 648  -RALEAAG---VPIIGTSPDAIDCAEDRERFQALINELGLRQPPNRIARTETEALEKAAE 703

Query: 805  IGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDAL 864
            IGYP+VVRPSYVLGGRAM+IV+T E L  Y++ AV+V PE PVL+D++L DAIE+DVDA+
Sbjct: 704  IGYPLVVRPSYVLGGRAMDIVHTPERLTKYMQEAVKVSPESPVLLDRFLDDAIELDVDAV 763

Query: 865  ADSCGNVV-IGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGL 923
            AD  G VV +GG+MEHIEQAGVHSGDSAC +P  +++ + +D I   T ++AK L V GL
Sbjct: 764  AD--GEVVAVGGVMEHIEQAGVHSGDSACSLPPYSLAPALIDEIRRQTREMAKALKVVGL 821

Query: 924  MNCQYAI----TTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFT 979
            MN Q+A+    T+  D+++LE NPRASRTVPFVSKA G+ LAK A   MSG +L   G T
Sbjct: 822  MNVQFAVQNAHTSHPDIFVLEVNPRASRTVPFVSKATGNALAKIAVRAMSGVTLAKQGLT 881

Query: 980  KEVI---PKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQ 1036
             E +   P + SVKEAV PF KFQG D +LGPEMRSTGEVMG+  SF  A  K+Q+AA  
Sbjct: 882  VEKLEKQPPYFSVKEAVFPFAKFQGVDPVLGPEMRSTGEVMGVGRSFAEAHRKSQVAAAS 941

Query: 1037 KLPLSGTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEG 1096
             LP  GT FLS+ +  KP +   A      GF +++T GTA  +E  GI    V ++HEG
Sbjct: 942  SLPDGGTAFLSVRNSDKPKVIVCAHELRHAGFDLIATEGTAAAIEAAGIPCRSVSRVHEG 1001

Query: 1097 RPHAGDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRS 1156
            RP+  D++ N +I ++V++ +    +  D   +RR  LA +V   TT++G LA AE IR+
Sbjct: 1002 RPNVIDLIKNHEISLVVMSVAEHEGELDDAGAIRRTCLAEQVTYHTTMAGGLAAAEGIRA 1061

Query: 1157 LKSNTV 1162
             +   V
Sbjct: 1062 GRKGDV 1067


>gi|334141897|ref|YP_004535104.1| carbamoyl-phosphate synthase large subunit [Novosphingobium sp. PP1Y]
 gi|333939928|emb|CCA93286.1| carbamoyl-phosphate synthase large subunit [Novosphingobium sp. PP1Y]
          Length = 1107

 Score = 1231 bits (3186), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 633/1127 (56%), Positives = 813/1127 (72%), Gaps = 64/1127 (5%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD+  IL++GAGPI+IGQACEFDYSGTQA KALKEEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDISSILVIGAGPIIIGQACEFDYSGTQAIKALKEEGYRVILVNSNPATIMTDPDMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TY+ P+TPE+V +++EKERPDA+LPTMGGQTALN A+AL   G LEKYGV++IGA  DA
Sbjct: 63   ATYVEPITPEIVAKIIEKERPDAVLPTMGGQTALNCALALFNDGTLEKYGVKMIGADADA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  F++AM  IG+++  SG+ +TL+E  ++    G  P IIRP+FTLGGTGGG+
Sbjct: 123  IDKAEDRQRFREAMDKIGLESARSGVAHTLEEAYAVLERTG-LPSIIRPSFTLGGTGGGV 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYNK EFEAI ++GL AS T++VL+E+SLLGWKEYE+EV+RD  DN +IICSIENVDPMG
Sbjct: 182  AYNKAEFEAIVRSGLDASPTTEVLIEESLLGWKEYEMEVVRDRHDNCIIICSIENVDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPA TLTDKEYQ +R  SI ++REIGVE GGSNVQFAVNP DG ++VIEMN
Sbjct: 242  VHTGDSITVAPALTLTDKEYQIMRTASIEVLREIGVETGGSNVQFAVNPKDGRLIVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRF 447
            PRVSRSSALASKATGFPIA++AAKL+VGY+LD+I N+IT  TPASFEP+IDYVVTKIPRF
Sbjct: 302  PRVSRSSALASKATGFPIARVAAKLAVGYTLDEIMNEITGATPASFEPTIDYVVTKIPRF 361

Query: 448  AFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDW-DW 506
            AFEKF GS+P LTT MKSVGE MA+GR  +ES QKALR LE G  G+  + V EL+    
Sbjct: 362  AFEKFKGSKPELTTAMKSVGEVMAIGRNIKESMQKALRGLETGLDGF--NRVPELEGAGR 419

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
            + +  +L    PDR+  +  AM++G  VDEIH ++F DKWFL   +E+I  E  ++   +
Sbjct: 420  DTITAALSKATPDRLLNVAQAMREGFSVDEIHAITFYDKWFLRHIEEIIAEEAKVMKDGL 479

Query: 567  SNMTKDDFYEVKRRGFSDKQI------------------------------AFATKSTEK 596
              +       +K  GFSDK++                              A A  ++E 
Sbjct: 480  P-IDAAGMRRLKSMGFSDKRLATLAVRSVHVAGGLGETQAKRSGLLHDALRAMAGATSED 538

Query: 597  EVREKRLSLGVIPSYKRVDTCAAEFEANTPYMYSSYDF------ECESAPTQKKKVLILG 650
            EVR+ R  LGV P +KR+D+CAAEFEA TPYMYS+Y+       E E+ P+ ++K++ILG
Sbjct: 539  EVRQLRTKLGVHPVFKRIDSCAAEFEAITPYMYSTYEAPFFGEPEDEAMPSDRRKIVILG 598

Query: 651  GGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSNPETVSTDYDTSDRLYFEPLTVEDV 710
            GGPNRIGQGIEFDYCC H  F+L  AGYETIM+N NPETVSTDYDTSDRLYFEPLT EDV
Sbjct: 599  GGPNRIGQGIEFDYCCVHACFALDDAGYETIMINCNPETVSTDYDTSDRLYFEPLTAEDV 658

Query: 711  LNVIDLERPE----GIIVQFGGQTPLKLSLPIHQYLDEHRLPSASGDGLVRIWGTSPDSI 766
            L ++ +E+ +    G+IVQFGGQTPLKL+      L++  +P         I GTSPD+I
Sbjct: 659  LEILRVEQQKGELVGVIVQFGGQTPLKLA----DALEKAGIP---------ILGTSPDAI 705

Query: 767  DAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEIGYPVVVRPSYVLGGRAMEIVY 826
            D AEDRERF A++++L ++QP  GIA+S  +A+A+A  IGYPV+ RPSYVLGGRAMEIV 
Sbjct: 706  DLAEDRERFAALVEKLGLKQPLNGIARSRDEAVAVANRIGYPVLTRPSYVLGGRAMEIVD 765

Query: 827  TDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALADSCGNVVIGGIMEHIEQAGVH 886
            +++ L  Y+  AV+V  + PVLID+YL DAIE DVDAL D    VV+ G+M+HIE+AG+H
Sbjct: 766  SEQQLDDYIATAVQVSGDSPVLIDQYLRDAIECDVDALCDG-DQVVVAGVMQHIEEAGIH 824

Query: 887  SGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNCQYAITTSGDVYLLEANPRAS 946
            SGDSAC IP  ++    ++ +      LA+ L V GLMN Q+A+   G+VYL+E NPRAS
Sbjct: 825  SGDSACTIPPYSLPDEIIEEMERQAEALARGLGVRGLMNVQFAV-KDGEVYLIEVNPRAS 883

Query: 947  RTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPKHVSVKEAVLPFEKFQGCDVLL 1006
            RTVPFV+KAIG P+AK AA VM+G+ L D    K  +  + +VKEAV PF +F G D +L
Sbjct: 884  RTVPFVAKAIGQPVAKIAARVMAGEKLADFPPFKRKL-DYFAVKEAVFPFARFPGVDPVL 942

Query: 1007 GPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVFLSLNDLTKPHLERIAKAFLDI 1066
             PEM+STGEVMGID  +P AFAKAQ+ AG +LP  GT F+S+ +  KP++    +  +D 
Sbjct: 943  SPEMKSTGEVMGIDTDYPTAFAKAQLGAGMRLPTEGTAFVSVKNSDKPYILPAVRKLVDE 1002

Query: 1067 GFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVANGQIQMMVITSSG-DSLDQID 1125
            GF+I++TSGT  +L   GI VE V K+ EGRPH  D + +G+I ++  T+ G  SL   D
Sbjct: 1003 GFRIIATSGTQKYLADAGIPVEMVNKVAEGRPHIVDKIIDGEISLIFNTTEGWQSLK--D 1060

Query: 1126 GLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTVTMTALQDFFD 1172
               +R   L  KV + TT + ++A +EAI +++ + + + +LQD+++
Sbjct: 1061 SQSIRASALTAKVSIFTTAAASVAASEAIATIRGSQLEVRSLQDYYN 1107


>gi|409400882|ref|ZP_11250838.1| carbamoyl phosphate synthase large subunit [Acidocella sp. MX-AZ02]
 gi|409130260|gb|EKN00045.1| carbamoyl phosphate synthase large subunit [Acidocella sp. MX-AZ02]
          Length = 1080

 Score = 1231 bits (3185), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 623/1095 (56%), Positives = 794/1095 (72%), Gaps = 32/1095 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ I+I+GAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP LAD
Sbjct: 3    KRTDIKSIMIIGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPSLAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+TPE+VE+++ KE+PDALLPTMGGQTALN A+ALA+SGALE+ GVELIGA  + 
Sbjct: 63   ATYIEPITPEMVEKIIAKEKPDALLPTMGGQTALNTAMALAKSGALERLGVELIGANAEV 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I +AEDR  F+ AM  IGV  P S I +T +E  +   ++G  P +IRP+FTLGGTGGGI
Sbjct: 123  IDRAEDRLKFRDAMAEIGVMGPKSAIAHTREEAAAALEQVG-LPAVIRPSFTLGGTGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEF  IC  G+ AS T++VLVE+S+LGWKEYE+EV+RD ADN +IIC+IEN+DPMG
Sbjct: 182  AYNREEFFEICMGGIEASPTNEVLVEESVLGWKEYEMEVVRDKADNCIIICAIENIDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDS+TVAPA TLTDKEYQ +RD SIA +R IGVE GGSNVQF +NP DG ++VIEMN
Sbjct: 242  VHTGDSVTVAPALTLTDKEYQIMRDASIACLRRIGVETGGSNVQFGINPEDGRMVVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRF 447
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDITK TPASFEP IDYVV KIPRF
Sbjct: 302  PRVSRSSALASKATGFPIAKIAAKLAVGYTLDELQNDITKATPASFEPVIDYVVIKIPRF 361

Query: 448  AFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDWE 507
             FEKFPG+  LL+T MKSVGEAMA+GR FQE+ QK LRSLE G SG         D   +
Sbjct: 362  TFEKFPGTPALLSTSMKSVGEAMAIGRNFQEALQKGLRSLETGLSGLD-EMAAPGDGGMD 420

Query: 508  QLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSVS 567
              + +L  P PDR+     A++ GM +++++  +  D WFL Q + +I  E  +     +
Sbjct: 421  AFRAALSTPRPDRLLVAAQALRAGMSLEDVNAATKFDPWFLEQMQGIIAAENEV---KAN 477

Query: 568  NMTKD--DFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANT 625
             + KD   F  +K  GF+DK++A      E  V   RL L V P+YKR+DTCA EF + T
Sbjct: 478  GLPKDAFGFRRLKAMGFADKRLAQLCGQKEAAVTAARLKLNVTPAYKRIDTCAGEFASAT 537

Query: 626  PYMYSSYDFEC-----ESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYET 680
             YMYS+Y+        E+  + K+KV+ILGGGPNRIGQGIEFDYCC H +++L+ AGYET
Sbjct: 538  SYMYSTYEGSYGTPLDEADVSDKRKVVILGGGPNRIGQGIEFDYCCVHAAYALREAGYET 597

Query: 681  IMMNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGI----IVQFGGQTPLKLSL 736
            IM+N NPETVSTDYDTSDRLYFEPL  EDV++++  E+ +G     IVQ+GGQTPLKLS 
Sbjct: 598  IMVNCNPETVSTDYDTSDRLYFEPLFAEDVISLLRKEQEKGTLLGCIVQYGGQTPLKLS- 656

Query: 737  PIHQYLDEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEA 796
               Q L+   +P         I GTS D+ID AEDRERF A++++L + QP  GIA+S  
Sbjct: 657  ---QALELAGIP---------ILGTSADAIDLAEDRERFAALLQKLGLRQPDNGIARSAE 704

Query: 797  DALAIAKEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDA 856
             A AIA+ IG+P+++RPSYVLGGRAMEIVY    L  Y+   +    E PVLID+YL++A
Sbjct: 705  QAEAIAERIGFPIIIRPSYVLGGRAMEIVYDRHGLARYMREMIRPSAENPVLIDRYLNEA 764

Query: 857  IEIDVDALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAK 916
            +E+DVD + D   +V + G+MEHIE+AG+HSGDSAC +P  ++S + +  + + T+ LAK
Sbjct: 765  LEVDVDCICDGT-DVYVAGVMEHIEEAGIHSGDSACSLPPYSLSPAIVAELRAETVALAK 823

Query: 917  RLNVCGLMNCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDL 976
             LNV GLMN QYAI     +Y+LE NPRASRTVPFV+KA G P+AK  ALVM+G+ L D 
Sbjct: 824  ALNVVGLMNVQYAIQND-TIYVLEVNPRASRTVPFVAKATGVPVAKIGALVMAGEKLADF 882

Query: 977  GFTKEVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQ 1036
                 + P+HV+VKEAV PF +F   D LLGPEM+STGEVMG+D +F  AFAKAQ+ AG 
Sbjct: 883  KLDDSLQPRHVAVKEAVFPFARFPNIDTLLGPEMKSTGEVMGLDTNFARAFAKAQLGAGV 942

Query: 1037 KLPLSGTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEG 1096
            KLPLSGT F+S+ D+ KP    +A+   ++GF +++T GTA  L   GI V++V K+ EG
Sbjct: 943  KLPLSGTAFVSVKDVDKPAFLPVARRLTELGFTLLATGGTAKVLTEAGIPVKKVNKVLEG 1002

Query: 1097 RPHAGDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRS 1156
            RPH  D + +G +Q+++ T+SG +    D   +RR  L + VP  TT++GA A A AI +
Sbjct: 1003 RPHCVDAILSGDVQLIINTASG-AQSVADSFDIRRSALTHGVPNFTTIAGARAAAHAIAA 1061

Query: 1157 LKSNTVTMTALQDFF 1171
            L   T+ +  LQ +F
Sbjct: 1062 LIGGTLEVAPLQSYF 1076


>gi|300715268|ref|YP_003740071.1| carbamoyl-phosphate synthase large subunit [Erwinia billingiae Eb661]
 gi|299061104|emb|CAX58211.1| Carbamoyl-phosphate synthase large chain [Erwinia billingiae Eb661]
          Length = 1074

 Score = 1231 bits (3185), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 617/1073 (57%), Positives = 788/1073 (73%), Gaps = 27/1073 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILILGAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  E+V +++EKERPDA+LPTMGGQTALN A+ L   G LE++GV +IGA  DA
Sbjct: 63   ATYIEPIHWEVVRKIIEKERPDAVLPTMGGQTALNCALELERQGVLEEFGVAMIGATADA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  F +AMK+IG+ T  SG  + ++E  ++A ++G FP IIRP+FT+GG+GGGI
Sbjct: 123  IDKAEDRQRFDKAMKSIGLDTARSGFAHNMEEAYAVAADVG-FPCIIRPSFTMGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEFE IC+ GL  S T+++L+++SL+GWKEYE+EV+RD  DN +I+CSIEN D MG
Sbjct: 182  AYNREEFEEICERGLDLSPTNELLIDESLIGWKEYEMEVVRDKNDNCIIVCSIENFDAMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            +HTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGVE GGSNVQF+VNP +G +++IEMN
Sbjct: 242  IHTGDSITVAPAQTLTDKEYQIMRNASMAVLREIGVETGGSNVQFSVNPANGRLIIIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKK-TPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT   TPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKIAAKLAVGYTLDELMNDITGGLTPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            F FEKF G+   LTTQMKSVGE MA+GRT QES QKALR LE G  G+      ++D + 
Sbjct: 362  FNFEKFAGANDRLTTQMKSVGEVMAIGRTLQESMQKALRGLEVGAHGFD----PKVDLND 417

Query: 507  EQ----LKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLL 562
             +    +++ L+    DR+  I  A + GM V+EI  L+ +D+WFL Q +EL+ +E  + 
Sbjct: 418  AEAMTVIRHELKDAGSDRIWYIADAFRAGMNVEEIFSLTNVDRWFLVQIEELVQLEGQVA 477

Query: 563  TQSVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFE 622
             + V+ +T D    +KR+GF+D +++     +E EVR+ R    + P YKRVDTCAAEF 
Sbjct: 478  REGVNGLTADFLRTLKRKGFADARLSALAGVSEAEVRKLREQYNLHPVYKRVDTCAAEFS 537

Query: 623  ANTPYMYSSYDFECESAP-TQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETI 681
             +T YMYS+Y+ ECES P + ++K+++LGGGPNRIGQGIEFDYCC H S +L+  GYETI
Sbjct: 538  TDTAYMYSTYEEECESNPNSDREKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETI 597

Query: 682  MMNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQY 741
            M+N NPETVSTDYDTSDRLYFEP+T+EDVL ++ +E+P+G+IVQ+GGQTPLKL+      
Sbjct: 598  MVNCNPETVSTDYDTSDRLYFEPVTLEDVLEIVRIEKPKGVIVQYGGQTPLKLA------ 651

Query: 742  LDEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAI 801
                R   A+G   V I GTSPD+ID AEDRERF   ++ L ++QP      +   A+  
Sbjct: 652  ----RELEAAG---VPIIGTSPDAIDRAEDRERFQQAVERLGLKQPANSTVTAIEQAVEK 704

Query: 802  AKEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDV 861
            A  IGYP+VVRPSYVLGGRAMEIVY D  L  Y +NAV V  + PVL+D++L DA+E+DV
Sbjct: 705  AAVIGYPLVVRPSYVLGGRAMEIVYDDIDLKRYFQNAVAVSNDAPVLLDRFLDDAVEVDV 764

Query: 862  DALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVC 921
            DA+ D    V+IGGIMEHIEQAGVHSGDSAC +P  T+S    D +     KLA  L V 
Sbjct: 765  DAICDG-ERVLIGGIMEHIEQAGVHSGDSACSLPAYTLSKEIQDVMRQQVEKLAFELCVR 823

Query: 922  GLMNCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKE 981
            GLMN Q+A+  + +VYL+E NPRA+RTVPFVSKA G PLAK AA VM+GK+L + G T+E
Sbjct: 824  GLMNVQFAVKDN-EVYLIEVNPRAARTVPFVSKATGVPLAKVAARVMAGKTLAEQGITEE 882

Query: 982  VIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLS 1041
            VIP + SVKE VLPF KFQG D +LGPEMRSTGEVMG+  +F  AF+KA + A   +  +
Sbjct: 883  VIPPYYSVKEVVLPFNKFQGVDPILGPEMRSTGEVMGVGKTFAEAFSKAMLGAASNMKKT 942

Query: 1042 GTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAG 1101
            G   LS+ D  K  +  +A     +GF++ +T GTA  L   GI +  V K+HEGRPH  
Sbjct: 943  GRALLSVRDGDKKRIVALAAKLQSLGFELDATHGTAVVLGEAGINIRLVNKVHEGRPHIQ 1002

Query: 1102 DMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAI 1154
            D + NG+   +V T++G    + D   +RR  L YKV   TT++GA A A ++
Sbjct: 1003 DRLKNGEYAYIVNTTAGRQAIE-DSKLIRRSALQYKVHYDTTLNGAFATANSL 1054


>gi|416895377|ref|ZP_11925278.1| carbamoyl-phosphate synthase large chain [Escherichia coli STEC_7v]
 gi|417112210|ref|ZP_11964333.1| carbamoyl-phosphate synthase, large subunit [Escherichia coli 1.2741]
 gi|422783198|ref|ZP_16835982.1| carbamoyl-phosphate synthase [Escherichia coli TW10509]
 gi|422802650|ref|ZP_16851143.1| carbamoyl-phosphate synthase [Escherichia coli M863]
 gi|323964869|gb|EGB60336.1| carbamoyl-phosphate synthase [Escherichia coli M863]
 gi|323975800|gb|EGB70896.1| carbamoyl-phosphate synthase [Escherichia coli TW10509]
 gi|327255008|gb|EGE66611.1| carbamoyl-phosphate synthase large chain [Escherichia coli STEC_7v]
 gi|386142994|gb|EIG84130.1| carbamoyl-phosphate synthase, large subunit [Escherichia coli 1.2741]
          Length = 1072

 Score = 1231 bits (3185), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 619/1070 (57%), Positives = 780/1070 (72%), Gaps = 18/1070 (1%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILILGAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  E+V +++EKERPDA+LPTMGGQTALN A+ L   G LE++GV +IGA  DA
Sbjct: 63   ATYIEPIHWEVVRKIIEKERPDAVLPTMGGQTALNCALELERQGVLEEFGVTMIGATADA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  F  AMK IG++T  SGI +T++E +++A E+G FP IIRP+FT+GG+GGGI
Sbjct: 123  IDKAEDRRRFDVAMKKIGLETARSGIAHTMEEALAVAAEVG-FPCIIRPSFTMGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEFE IC  GL  S T ++L+++SL+GWKEYE+EV+RD  DN +I+CSIEN D MG
Sbjct: 182  AYNREEFEEICARGLDLSPTKELLIDESLIGWKEYEMEVVRDKNDNCIIVCSIENFDAMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            +HTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGVE GGSNVQFAVNP +G ++VIEMN
Sbjct: 242  IHTGDSITVAPAQTLTDKEYQIMRNASMAVLREIGVETGGSNVQFAVNPKNGRLIVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT  +TPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGYTLDELMNDITGGRTPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            F FEKF G+   LTTQMKSVGE MA+GRT QES QKALR LE G +G+      +     
Sbjct: 362  FNFEKFAGANDRLTTQMKSVGEVMAIGRTQQESLQKALRGLEVGATGFDPKVSLDDPEAL 421

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
             +++  L+    +R+  I  A + G+ VD +  L+ ID+WFL Q +EL+ +E+ +    +
Sbjct: 422  TKIRRELKDAGAERIWYIADAFRAGLSVDGVFNLTNIDRWFLVQIEELVRLEEKVAEVGI 481

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
            + +  D   ++KR+GF+D ++A      E E+R+ R    + P YKRVDTCAAEF  +T 
Sbjct: 482  TGLNADFLRQLKRKGFADARLAKLAGVREAEIRKLRDQYDLHPVYKRVDTCAAEFATDTA 541

Query: 627  YMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSN 686
            YMYS+Y+ ECES P+ + K+++LGGGPNRIGQGIEFDYCC H S +L+  GYETIM+N N
Sbjct: 542  YMYSTYEEECESNPSDRDKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVNCN 601

Query: 687  PETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHR 746
            PETVSTDYDTSDRLYFEP+T+EDVL ++ +E+P+G+IVQ+GGQTPLKL+          R
Sbjct: 602  PETVSTDYDTSDRLYFEPVTLEDVLEIVRIEKPKGVIVQYGGQTPLKLA----------R 651

Query: 747  LPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEIG 806
               A+G   V + GTSPD+ID AEDRERF   +  L ++QP      +   A+  AKEIG
Sbjct: 652  ALEAAG---VPVIGTSPDAIDRAEDRERFQHAVDRLKLKQPANATVTAIEMAVEKAKEIG 708

Query: 807  YPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALAD 866
            YP+VVRPSYVLGGRAMEIVY +  L  Y + AV V  + PVL+D +L DA+E+DVDA+ D
Sbjct: 709  YPLVVRPSYVLGGRAMEIVYDEADLRRYFQTAVSVSNDAPVLLDHFLDDAVEVDVDAICD 768

Query: 867  SCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNC 926
                V+IGGIMEHIEQAGVHSGDSAC +P  T+S    D +     KLA  L V GLMN 
Sbjct: 769  G-EMVLIGGIMEHIEQAGVHSGDSACSLPAYTLSQEIQDVMRQQVQKLAFELQVRGLMNV 827

Query: 927  QYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPKH 986
            Q+A+  + +VYL+E NPRA+RTVPFVSKA G PLAK AA VM+GKSL + G TKEVIP +
Sbjct: 828  QFAVKNN-EVYLIEVNPRAARTVPFVSKATGVPLAKVAARVMAGKSLAEQGVTKEVIPPY 886

Query: 987  VSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVFL 1046
             SVKE VLPF KF G D LLGPEMRSTGEVMG+  +F  AFAKAQ+ +   +   G   L
Sbjct: 887  YSVKEVVLPFNKFPGVDPLLGPEMRSTGEVMGVGRTFAEAFAKAQLGSNSTMKKHGRALL 946

Query: 1047 SLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVAN 1106
            S+ +  K  +  +A   L  GF++ +T GTA  L   GI    V K+HEGRPH  D + N
Sbjct: 947  SVREGDKERVVDLAAKLLKQGFELDATHGTAIVLGEAGINPRLVNKVHEGRPHIQDRIKN 1006

Query: 1107 GQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRS 1156
            G+   ++ T+SG    + D   +RR  L YKV   TT++G  A A A+ +
Sbjct: 1007 GEYTYIINTTSGRRAIE-DSRVIRRSALQYKVHYDTTLNGGFATAMALNA 1055


>gi|218547480|ref|YP_002381271.1| carbamoyl phosphate synthase large subunit [Escherichia fergusonii
            ATCC 35469]
 gi|218355021|emb|CAQ87627.1| carbamoyl-phosphate synthase large subunit [Escherichia fergusonii
            ATCC 35469]
          Length = 1073

 Score = 1231 bits (3185), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 619/1070 (57%), Positives = 780/1070 (72%), Gaps = 18/1070 (1%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILILGAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  E+V +++EKERPDA+LPTMGGQTALN A+ L   G LE++GV +IGA  DA
Sbjct: 63   ATYIEPIHWEVVRKIIEKERPDAVLPTMGGQTALNCALELERQGVLEEFGVTMIGATADA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  F  AMK IG++T  SGI +T++E +++A E+G FP IIRP+FT+GG+GGGI
Sbjct: 123  IDKAEDRRRFDVAMKKIGLETARSGIAHTMEEALAVAAEVG-FPCIIRPSFTMGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEFE IC  GL  S T ++L+++SL+GWKEYE+EV+RD  DN +I+CSIEN D MG
Sbjct: 182  AYNREEFEEICARGLDLSPTKELLIDESLIGWKEYEMEVVRDKNDNCIIVCSIENFDAMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            +HTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGVE GGSNVQFAVNP +G ++VIEMN
Sbjct: 242  IHTGDSITVAPAQTLTDKEYQIMRNASMAVLREIGVETGGSNVQFAVNPKNGRLIVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT  +TPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGYTLDELMNDITGGRTPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            F FEKF G+   LTTQMKSVGE MA+GRT QES QKALR LE G +G+      +     
Sbjct: 362  FNFEKFAGANDRLTTQMKSVGEVMAIGRTQQESLQKALRGLEVGATGFDPKVSLDDPEAL 421

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
             +++  L+    +R+  I  A + G+ VD +  L+ ID+WFL Q +EL+ +E+ +    +
Sbjct: 422  TKIRRELKDAGAERIWYIADAFRAGLSVDGVFNLTNIDRWFLVQIEELVRLEEKVAEVGI 481

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
            + +  D   ++KR+GF+D ++A      E E+R+ R    + P YKRVDTCAAEF  +T 
Sbjct: 482  TGLNADFLRQLKRKGFADARLAKLAGVREAEIRKLRDQYDLHPVYKRVDTCAAEFATDTA 541

Query: 627  YMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSN 686
            YMYS+Y+ ECES P+ + K+++LGGGPNRIGQGIEFDYCC H S +L+  GYETIM+N N
Sbjct: 542  YMYSTYEEECESNPSDRDKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVNCN 601

Query: 687  PETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHR 746
            PETVSTDYDTSDRLYFEP+T+EDVL ++ +E+P+G+IVQ+GGQTPLKL+          R
Sbjct: 602  PETVSTDYDTSDRLYFEPVTLEDVLEIVRIEKPKGVIVQYGGQTPLKLA----------R 651

Query: 747  LPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEIG 806
               A+G   V + GTSPD+ID AEDRERF   +  L ++QP      +   A+  AKEIG
Sbjct: 652  ALEAAG---VPVIGTSPDAIDRAEDRERFQHAVDRLKLKQPANATVTAIEMAVEKAKEIG 708

Query: 807  YPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALAD 866
            YP+VVRPSYVLGGRAMEIVY +  L  Y + AV V  + PVL+D +L DA+E+DVDA+ D
Sbjct: 709  YPLVVRPSYVLGGRAMEIVYDEADLRRYFQTAVSVSNDAPVLLDHFLDDAVEVDVDAICD 768

Query: 867  SCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNC 926
                V+IGGIMEHIEQAGVHSGDSAC +P  T+S    D +     KLA  L V GLMN 
Sbjct: 769  G-EMVLIGGIMEHIEQAGVHSGDSACSLPAYTLSQEIQDVMRQQVQKLAFELQVRGLMNV 827

Query: 927  QYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPKH 986
            Q+A+  + +VYL+E NPRA+RTVPFVSKA G PLAK AA VM+GKSL + G TKEVIP +
Sbjct: 828  QFAVKNN-EVYLIEVNPRAARTVPFVSKATGVPLAKVAARVMAGKSLAEQGVTKEVIPPY 886

Query: 987  VSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVFL 1046
             SVKE VLPF KF G D LLGPEMRSTGEVMG+  +F  AFAKAQ+ +   +   G   L
Sbjct: 887  YSVKEVVLPFNKFPGVDPLLGPEMRSTGEVMGVGRTFAEAFAKAQLGSNSTMKKHGRALL 946

Query: 1047 SLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVAN 1106
            S+ +  K  +  +A   L  GF++ +T GTA  L   GI    V K+HEGRPH  D + N
Sbjct: 947  SVREGDKERVVDLAAKLLKQGFELDATHGTAIVLGEAGINPRLVNKVHEGRPHIQDRIKN 1006

Query: 1107 GQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRS 1156
            G+   ++ T+SG    + D   +RR  L YKV   TT++G  A A A+ +
Sbjct: 1007 GEYTYIINTTSGRRAIE-DSRVIRRSALQYKVHYDTTLNGGFATAMALNA 1055


>gi|154246689|ref|YP_001417647.1| carbamoyl-phosphate synthase large subunit [Xanthobacter
            autotrophicus Py2]
 gi|154160774|gb|ABS67990.1| carbamoyl-phosphate synthase, large subunit [Xanthobacter
            autotrophicus Py2]
          Length = 1120

 Score = 1231 bits (3185), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 633/1125 (56%), Positives = 800/1125 (71%), Gaps = 60/1125 (5%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD+  ILI+GAGPIVIGQACEFDYSGTQA KALKEEGY V+L+NSNPATIMTDP +AD
Sbjct: 3    KRTDIETILIIGAGPIVIGQACEFDYSGTQAVKALKEEGYRVVLVNSNPATIMTDPDMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPD-----ALLPTMGGQTALNLAVALAESGALEKYGVELIG 202
             TYI P+T E+V +++EKER D     ALLPTMGGQTALN A++L + G LEKY VE+IG
Sbjct: 63   ATYIEPITAEIVTKIIEKERGDRSKGFALLPTMGGQTALNCALSLKKMGTLEKYDVEMIG 122

Query: 203  AKLDAIKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGG 262
            A  +AI KAEDR+LF++AM  IG+ TP S    TL + +     +G  P IIRP+FT+GG
Sbjct: 123  ATAEAIDKAEDRELFREAMTKIGLSTPTSRQIKTLSQALEALEVVG-LPAIIRPSFTMGG 181

Query: 263  TGGGIAYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIEN 322
            TGGGIAYNK EF  I + G+ AS T++VL+E+S+LGWKEYE+EV+RD ADN +IICSIEN
Sbjct: 182  TGGGIAYNKAEFIEIVERGIDASPTNEVLIEESVLGWKEYEMEVVRDKADNCIIICSIEN 241

Query: 323  VDPMGVHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVM 382
            +DPMGVHTGDSITVAPA TLTDKEYQ +RD S+A++REIGVE GGSNVQFAVNP DG ++
Sbjct: 242  IDPMGVHTGDSITVAPALTLTDKEYQIMRDASLAVLREIGVETGGSNVQFAVNPADGRLI 301

Query: 383  VIEMNPRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVV 441
            VIEMNPRVSRSSALASKATGFPIAK+AA+L+VGY+LD+I NDIT   TPASFEP+IDYVV
Sbjct: 302  VIEMNPRVSRSSALASKATGFPIAKVAARLAVGYTLDEIENDITGGATPASFEPTIDYVV 361

Query: 442  TKIPRFAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKE 501
            TK+PRFAFEKFPG++P+LTT MKSVGEAMA+GRTFQES QKALRSLE G +G     ++ 
Sbjct: 362  TKVPRFAFEKFPGADPVLTTAMKSVGEAMAIGRTFQESLQKALRSLETGLTGLDDIEIEG 421

Query: 502  LDW--DWEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQ 559
            L    D   ++ +L  P PDR+  +  AM+ G+  ++IH    ID WFL + + +++ E 
Sbjct: 422  LGQGDDKNAIRAALGTPTPDRLLYVAQAMRLGLTDEQIHSACKIDPWFLAEIRGIVETEA 481

Query: 560  FLLTQSVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAA 619
             +    +  +T   F  +K  GF+D ++A     +E EVRE+R  L V P+YKR+DTCAA
Sbjct: 482  KVRRLGLP-VTAGAFRSLKAMGFADARLATLAGLSEAEVRERRQRLDVRPAYKRIDTCAA 540

Query: 620  EFEANTPYMYSSYD------FECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSL 673
            EF + T YMYS+Y+         E+ P+ ++KV+ILGGGPNRIGQGIEFDYCCCH +F+L
Sbjct: 541  EFASPTAYMYSTYETPFAGAVADEARPSNRQKVIILGGGPNRIGQGIEFDYCCCHAAFAL 600

Query: 674  QSAGYETIMMNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERP----EGIIVQFGGQ 729
            + AGYE IM+N NPETVSTDYDTSDRLYFEPLT EDVL +I  E+     +G+IVQFGGQ
Sbjct: 601  KDAGYEAIMVNCNPETVSTDYDTSDRLYFEPLTAEDVLELIAREKTSGTLKGVIVQFGGQ 660

Query: 730  TPLKLSLPIHQYLDEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKG 789
            TPLKL+    + L++  +P         I GTSPD+ID AEDR+RF  ++  L I QP  
Sbjct: 661  TPLKLA----KALEDAEVP---------ILGTSPDAIDLAEDRDRFKTLLDRLKIRQPAN 707

Query: 790  GIAKSEADALAIAKEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAV---------- 839
            GIA S   A  +A E+GYP+VVRPSYVLGGRAM+I+  +  L  YL   +          
Sbjct: 708  GIAYSVEQARLVAAELGYPMVVRPSYVLGGRAMQIIREESQLGDYLLETLPGLVPQEVKA 767

Query: 840  -----------EVDPERPVLIDKYLSDAIEIDVDALADSCGNVVIGGIMEHIEQAGVHSG 888
                        V  + P+L D+YLSDAIE+DVDAL D   +V I GIMEHIE+AG+HSG
Sbjct: 768  RYPNDKTGQINTVLGKNPLLFDRYLSDAIEVDVDALCDGT-DVFIAGIMEHIEEAGIHSG 826

Query: 889  DSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNCQYAITTSGDV-YLLEANPRASR 947
            DSAC +P  ++S   L  +   T  +A  L V GLMN QYAI   GDV Y+LE NPRASR
Sbjct: 827  DSACSLPPYSLSPEILAALEKQTAAMALALGVVGLMNVQYAI--KGDVIYVLEVNPRASR 884

Query: 948  TVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPKHVSVKEAVLPFEKFQGCDVLLG 1007
            TVPFV+K IG P+AK AA VM+G+ L      +  +  H+++KEAV PF +F G D +LG
Sbjct: 885  TVPFVAKVIGLPIAKIAARVMAGEKLASFNLERPQV-AHIAIKEAVFPFARFPGVDTVLG 943

Query: 1008 PEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVFLSLNDLTKPHLERIAKAFLDIG 1067
            PEMRSTGEVMG+D  F +AFAK+Q+  G K+P SGTVF+SL +  K  +    K  LDIG
Sbjct: 944  PEMRSTGEVMGLDTDFGVAFAKSQLGGGTKVPKSGTVFVSLKEGDKERILPSIKMLLDIG 1003

Query: 1068 FKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVANGQIQMMVITSSGDSLDQIDGL 1127
            FK+++TSGT  FLE  G+   ++ K+ EGRPH  D + NG++Q++  T+ G +    D  
Sbjct: 1004 FKVIATSGTQRFLEEHGVPSAKINKVLEGRPHIVDAIKNGEVQLVFNTTEG-AQALADSR 1062

Query: 1128 KLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTVTMTALQDFFD 1172
             LRR  L  KVP  TT+SGA+A A+ I++     + +  LQD+F+
Sbjct: 1063 SLRRAALLQKVPYYTTLSGAIAAAQGIKAYAGGDLKVRPLQDYFE 1107


>gi|300703810|ref|YP_003745412.1| carbamoyl-phosphate synthase large subunit [Ralstonia solanacearum
            CFBP2957]
 gi|299071473|emb|CBJ42793.1| Carbamoyl-phosphate synthase large chain (Carbamoyl-phosphate
            synthetase ammonia chain) [Ralstonia solanacearum
            CFBP2957]
          Length = 1081

 Score = 1231 bits (3185), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 618/1085 (56%), Positives = 805/1085 (74%), Gaps = 32/1085 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILI+GAGPI+IGQACEFDYSG QACKAL+EEG++V+L+NSNPATIMTDP  AD
Sbjct: 3    KRTDIKTILIIGAGPIIIGQACEFDYSGAQACKALREEGFKVVLVNSNPATIMTDPSTAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+T E+VE+++ KERPDA+LPTMGGQTALN A+ L   G L+KY VELIGA  +A
Sbjct: 63   VTYIEPITWEVVERIIAKERPDAILPTMGGQTALNCALDLHRHGVLQKYNVELIGASPEA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGE------FPLIIRPAFTLG 261
            I KAEDR  FK AM  IG+ +  SGI ++L+E +++  +I        +P++IRP+FTLG
Sbjct: 123  IDKAEDRQKFKDAMTKIGLGSAKSGIAHSLEEALAVQAQIARETGTSGYPIVIRPSFTLG 182

Query: 262  GTGGGIAYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIE 321
            GTGGGIAYN+EEFE ICK GL  S T+++L+E+SLLGWKEYE+EV+RD  DN +I+CSIE
Sbjct: 183  GTGGGIAYNREEFEDICKRGLDLSPTNELLIEESLLGWKEYEMEVVRDKKDNCIIVCSIE 242

Query: 322  NVDPMGVHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEV 381
            N+DPMG+HTGDSITVAPAQTLTDKEYQ LR+ S+A++REIGV+ GGSNVQF++NP DG +
Sbjct: 243  NLDPMGIHTGDSITVAPAQTLTDKEYQILRNASLAVLREIGVDTGGSNVQFSINPQDGRM 302

Query: 382  MVIEMNPRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYV 440
            +VIEMNPRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ N+IT   TPASFEPSIDYV
Sbjct: 303  IVIEMNPRVSRSSALASKATGFPIAKVAAKLAVGYTLDELKNEITGGATPASFEPSIDYV 362

Query: 441  VTKIPRFAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVK 500
            VTK+PRFAFEKFP ++  LTTQMKSVGE MA+GRTFQESFQKALR LE G  G     + 
Sbjct: 363  VTKVPRFAFEKFPQADSHLTTQMKSVGEVMAMGRTFQESFQKALRGLEVGVDG-----LD 417

Query: 501  ELDWDWEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQF 560
            E   D +++   +    PDR+  +  A + G+ +DE++  + +D WFL Q ++++  E  
Sbjct: 418  EKSTDRDEIIEEIGEAGPDRIWYLGDAFRLGLSIDEVYAETAVDPWFLAQIEDIVKTEAL 477

Query: 561  LLTQSVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAE 620
            +  +++ +++  +   +K++GFSD+++A   K+T + VREKR++  V P YKRVDTCAAE
Sbjct: 478  VKARTLESLSAAELRLLKQKGFSDRRLAKLMKTTAQAVREKRIAEKVRPVYKRVDTCAAE 537

Query: 621  FEANTPYMYSSYDF---ECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAG 677
            F  NT Y+YS+Y+    ECE+ PT +KK+++LGGGPNRIGQGIEFDYCC H + +L+  G
Sbjct: 538  FATNTAYLYSTYEAEHGECEAEPTDRKKIMVLGGGPNRIGQGIEFDYCCVHAALALREDG 597

Query: 678  YETIMMNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLP 737
            YETIM+N NPETVSTDYDTSDRLYFEP+T+EDVL ++D E+P G+IVQ+GGQTPLKL+L 
Sbjct: 598  YETIMVNCNPETVSTDYDTSDRLYFEPVTLEDVLEIVDKEKPVGVIVQYGGQTPLKLALD 657

Query: 738  IHQYLDEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEAD 797
            +           A+G   V I GT+PD IDAAEDRERF  ++ EL + QP    A++E +
Sbjct: 658  LE----------ANG---VPIIGTTPDMIDAAEDRERFQKLLHELGLRQPPNRTARAEDE 704

Query: 798  ALAIAKEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAI 857
            AL +A+EIGYP+VVRPSYVLGGRAMEIV+    L  Y+  AV+V  + PVL+D++L+DAI
Sbjct: 705  ALKLAEEIGYPLVVRPSYVLGGRAMEIVHEPRDLERYMREAVKVSNDSPVLLDRFLNDAI 764

Query: 858  EIDVDALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKR 917
            E DVD L+D    V IGG+MEHIEQAGVHSGDSAC +P  ++S + +D +   T  +A+ 
Sbjct: 765  ECDVDCLSDG-KRVFIGGVMEHIEQAGVHSGDSACSLPPYSLSQATVDELKRQTAAMARA 823

Query: 918  LNVCGLMNCQYAITTSGD---VYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLN 974
            LNV GLMN Q+AI   G    VY+LE NPRASRTVP+VSKA G  LAK AA  M+G+SL+
Sbjct: 824  LNVVGLMNVQFAIQQKGGEDIVYVLEVNPRASRTVPYVSKATGISLAKVAARCMAGQSLD 883

Query: 975  DLGFTKEVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAA 1034
            + G   EV+P + SVKEAV PF KF G D +LGPEMRSTGEVMG+  +F  A  K+Q+AA
Sbjct: 884  EQGINHEVVPAYYSVKEAVFPFNKFPGVDPVLGPEMRSTGEVMGVGRTFGEALFKSQLAA 943

Query: 1035 GQKLPLSGTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMH 1094
            G +LP  GTV +++ D  KP    +A+    +G+ IV+T GTA  +E  GI V  V K+ 
Sbjct: 944  GSRLPEKGTVLMTVKDSDKPRAVEVARTLHTLGYPIVATRGTASAIEAAGIPVRVVNKVK 1003

Query: 1095 EGRPHAGDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAI 1154
            +GRPH  DM+ NG++ ++  T         D   +R   LA +V   TT++GA A  E +
Sbjct: 1004 DGRPHIVDMIKNGELALVFTTVDETRAAIADSRSIRTAALANRVTYYTTIAGARAAVEGL 1063

Query: 1155 RSLKS 1159
            + L++
Sbjct: 1064 KHLQN 1068


>gi|407769424|ref|ZP_11116800.1| carbamoyl phosphate synthase large subunit [Thalassospira xiamenensis
            M-5 = DSM 17429]
 gi|407287751|gb|EKF13231.1| carbamoyl phosphate synthase large subunit [Thalassospira xiamenensis
            M-5 = DSM 17429]
          Length = 1080

 Score = 1231 bits (3185), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 624/1095 (56%), Positives = 797/1095 (72%), Gaps = 32/1095 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILI+GAGPIVIGQACEFDYSG QACKALKEEGY VIL+NSNPATIMTDP LAD
Sbjct: 3    KRTDIKSILIIGAGPIVIGQACEFDYSGAQACKALKEEGYRVILVNSNPATIMTDPNLAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+TPE+V +++EKERPDALLPTMGGQTALN A+AL + G L+KYGVE+IGAK   
Sbjct: 63   ATYIEPITPEMVAKIIEKERPDALLPTMGGQTALNTALALYDDGTLDKYGVEMIGAKKHV 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I+KAEDR LF++AM  IG+++  S +  T +E + +A E    P IIRP+FTLGG GGGI
Sbjct: 123  IEKAEDRQLFREAMDKIGLESARSAMVRTFEEAV-VALETTGLPAIIRPSFTLGGEGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEFE I + GLA S T  VLVE+S+LGWKEYE+EV+RD ADN +IICSIENVDPMG
Sbjct: 182  AYNREEFEQIVRNGLAISPTHTVLVEESILGWKEYEMEVVRDHADNCIIICSIENVDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            +HTGDSITVAPA TLTDKEYQ +RD S+A++REIGV+ GGSNVQFAVNP DG ++VIEMN
Sbjct: 242  IHTGDSITVAPALTLTDKEYQIMRDASLAVLREIGVDTGGSNVQFAVNPDDGRLIVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRF 447
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT  TPASFEP+IDYVVTKIPRF
Sbjct: 302  PRVSRSSALASKATGFPIAKIAAKLAVGYTLDELDNDITGVTPASFEPTIDYVVTKIPRF 361

Query: 448  AFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDWE 507
             FEKFPG++ LL T MKSVGEAM++G +F ES QK LRS+E G +G     + E   D  
Sbjct: 362  TFEKFPGAQALLGTAMKSVGEAMSIGGSFAESLQKGLRSMETGLTGLNEVKI-EGAPDKA 420

Query: 508  QLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSVS 567
             ++  L  P P R+     A + G+ + EI   +  D W+L Q + L+  E+ +  + + 
Sbjct: 421  AIRAKLTQPMPFRILYAAQAFRHGLTLSEIQSATKFDPWYLRQVEMLVAEEEQVRAKGLP 480

Query: 568  NMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTPY 627
               K +   +K+ GFSD ++A      E +VR  R ++ + P YKR+DTCAAEF + T Y
Sbjct: 481  K-DKQELLRLKKLGFSDARLAELVGMEEDDVRAIRHAMELRPVYKRIDTCAAEFPSRTSY 539

Query: 628  MYSSYDF------ECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETI 681
            MYS Y+       E E+  T ++KV+ILGGGPNRIGQGIEFDYCC H +++L+  G E I
Sbjct: 540  MYSIYEGDGFFEPENEAEVTDRRKVIILGGGPNRIGQGIEFDYCCVHAAYALREVGIEAI 599

Query: 682  MMNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPE----GIIVQFGGQTPLKLSLP 737
            M+N NPETVSTDYDTSDRLYFEPLT EDV+ +  LE+ +    G+IVQ+GGQTPLKLS  
Sbjct: 600  MVNCNPETVSTDYDTSDRLYFEPLTAEDVIELCQLEQSKGELLGVIVQYGGQTPLKLS-- 657

Query: 738  IHQYLDEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEAD 797
                L++  +P         I GTSPDSID AEDR+RF  +I +L ++QP  GIA+S  +
Sbjct: 658  --AALEKAGIP---------ILGTSPDSIDLAEDRDRFQELIHKLGLKQPANGIARSVDE 706

Query: 798  ALAIAKEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAI 857
            A+ IA+ IGYP+V+RPSYVLGGRAMEIV+T E L+ Y+  AV+V  + PVLID +L DAI
Sbjct: 707  AVKIAEGIGYPIVIRPSYVLGGRAMEIVHTTEDLLRYMTEAVQVSGKSPVLIDSFLQDAI 766

Query: 858  EIDVDALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKR 917
            EID DA++D   NV + GIM+HIE+AG+HSGDSAC +P  ++    +D +   T++LAK 
Sbjct: 767  EIDADAVSDG-ENVFVAGIMQHIEEAGIHSGDSACSLPPYSLGQDMIDRLKEQTVQLAKA 825

Query: 918  LNVCGLMNCQYAITTSGDV-YLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDL 976
            L+V GLMN Q+AI   GDV YL+E NPRASRTVPFV+KA G+P+AK  A +M+G+ L+D 
Sbjct: 826  LDVVGLMNVQFAI--KGDVIYLIEVNPRASRTVPFVAKATGNPIAKIGARIMAGEKLSDF 883

Query: 977  GFTKEVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQ 1036
               +    KH++VKEAVLPF +F G D LLGPEMRSTGEVMG+D  F  AFAKAQ+AAG 
Sbjct: 884  KINEGPF-KHIAVKEAVLPFNRFPGVDTLLGPEMRSTGEVMGLDTDFGRAFAKAQMAAGH 942

Query: 1037 KLPLSGTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEG 1096
             LP SG +F+S+ +  KP   ++A+  +++GF IV+T GTA  LE +G+ V  V K+ EG
Sbjct: 943  DLPQSGKIFMSVKNYDKPAAVQLARDAIELGFVIVATHGTAEALEKEGLDVTPVNKVQEG 1002

Query: 1097 RPHAGDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRS 1156
            RPH  DM+ NG I ++  T+       +D   +RR  L+  +P  TT++GA A   AI +
Sbjct: 1003 RPHIVDMMKNGDINLVFNTTESKQA-VVDSFSIRRTALSNDIPYYTTIAGARATLRAIDN 1061

Query: 1157 LKSNTVTMTALQDFF 1171
            LK   + +  +Q++ 
Sbjct: 1062 LKRGALAVRPVQEYL 1076


>gi|421887841|ref|ZP_16318977.1| Carbamoyl-phosphate synthase large chain (Carbamoyl-phosphate
            synthetase ammonia chain) [Ralstonia solanacearum K60-1]
 gi|378966819|emb|CCF95725.1| Carbamoyl-phosphate synthase large chain (Carbamoyl-phosphate
            synthetase ammonia chain) [Ralstonia solanacearum K60-1]
          Length = 1081

 Score = 1231 bits (3185), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 619/1085 (57%), Positives = 804/1085 (74%), Gaps = 32/1085 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILI+GAGPI+IGQACEFDYSG QACKAL+EEG++V+L+NSNPATIMTDP  AD
Sbjct: 3    KRTDIKTILIIGAGPIIIGQACEFDYSGAQACKALREEGFKVVLVNSNPATIMTDPSTAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+T E+VE+++ KERPDA+LPTMGGQTALN A+ L   G L+KY VELIGA  +A
Sbjct: 63   VTYIEPITWEVVERIIAKERPDAILPTMGGQTALNCALDLHRHGVLQKYNVELIGASPEA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGE------FPLIIRPAFTLG 261
            I KAEDR  FK AM  IG+ +  SGI ++L+E +++  +I        +P++IRP+FTLG
Sbjct: 123  IDKAEDRQKFKDAMTKIGLGSAKSGIAHSLEEALAVQAQIARETGTSGYPIVIRPSFTLG 182

Query: 262  GTGGGIAYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIE 321
            GTGGGIAYN+EEFE ICK GL  S T+++L+E+SLLGWKEYE+EV+RD  DN +I+CSIE
Sbjct: 183  GTGGGIAYNREEFEDICKRGLDLSPTNELLIEESLLGWKEYEMEVVRDKKDNCIIVCSIE 242

Query: 322  NVDPMGVHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEV 381
            N+DPMG+HTGDSITVAPAQTLTDKEYQ LR+ S+A++REIGV+ GGSNVQF++NP DG +
Sbjct: 243  NLDPMGIHTGDSITVAPAQTLTDKEYQILRNASLAVLREIGVDTGGSNVQFSINPQDGRM 302

Query: 382  MVIEMNPRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYV 440
            +VIEMNPRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ N+IT   TPASFEPSIDYV
Sbjct: 303  IVIEMNPRVSRSSALASKATGFPIAKVAAKLAVGYTLDELKNEITGGATPASFEPSIDYV 362

Query: 441  VTKIPRFAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVK 500
            VTK+PRFAFEKFP ++  LTTQMKSVGE MA+GRTFQESFQKALR LE G  G     + 
Sbjct: 363  VTKVPRFAFEKFPQADSHLTTQMKSVGEVMAMGRTFQESFQKALRGLEVGVDG-----LD 417

Query: 501  ELDWDWEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQF 560
            E   D +++   +    PDR+  +  A + G+ +DE++  + +D WFL Q ++++  E  
Sbjct: 418  EKSTDRDEIIEEIGEAGPDRIWYLGDAFRLGLSIDEVYAETAVDPWFLAQIEDIVKTEAL 477

Query: 561  LLTQSVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAE 620
            +  +++ +++  +   +K++GFSD+++A   K+T + VREKR++  V P YKRVDTCAAE
Sbjct: 478  VKARTLESLSAAELRLLKQKGFSDRRLAKLMKTTAQAVREKRIAEKVRPVYKRVDTCAAE 537

Query: 621  FEANTPYMYSSYDF---ECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAG 677
            F  NT Y+YS+Y+    ECE+ PT +KK+++LGGGPNRIGQGIEFDYCC H + +L+  G
Sbjct: 538  FATNTAYLYSTYEAEHGECEAEPTDRKKIMVLGGGPNRIGQGIEFDYCCVHAALALREDG 597

Query: 678  YETIMMNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLP 737
            YETIM+N NPETVSTDYDTSDRLYFEP+T+EDVL ++D E+P G+IVQ+GGQTPLKL+L 
Sbjct: 598  YETIMVNCNPETVSTDYDTSDRLYFEPVTLEDVLEIVDKEKPVGVIVQYGGQTPLKLALD 657

Query: 738  IHQYLDEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEAD 797
            +           A+G   V I GT+PD IDAAEDRERF  ++ EL + QP    A++E +
Sbjct: 658  LE----------ANG---VPIIGTTPDMIDAAEDRERFQKLLHELGLRQPPNRTARAEDE 704

Query: 798  ALAIAKEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAI 857
            AL +A EIGYP+VVRPSYVLGGRAMEIV+    L  Y+  AV+V  + PVL+D++L+DAI
Sbjct: 705  ALKLADEIGYPLVVRPSYVLGGRAMEIVHEPRDLERYMREAVKVSNDSPVLLDRFLNDAI 764

Query: 858  EIDVDALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKR 917
            E DVD L+D    V IGG+MEHIEQAGVHSGDSAC +P  ++S + +D +   T  +AK 
Sbjct: 765  ECDVDCLSDG-KRVFIGGVMEHIEQAGVHSGDSACSLPPYSLSQATVDELKRQTAAMAKA 823

Query: 918  LNVCGLMNCQYAITTSGD---VYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLN 974
            LNV GLMN Q+AI   G    VY+LE NPRASRTVP+VSKA G  LAK AA  M+G+SL+
Sbjct: 824  LNVIGLMNVQFAIQQKGGEDIVYVLEVNPRASRTVPYVSKATGISLAKVAARCMAGQSLD 883

Query: 975  DLGFTKEVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAA 1034
            + G   EV+P + SVKEAV PF KF G D +LGPEMRSTGEVMG+  +F  A  K+Q+AA
Sbjct: 884  EQGINHEVVPAYYSVKEAVFPFNKFPGVDPVLGPEMRSTGEVMGVGRTFGEALFKSQLAA 943

Query: 1035 GQKLPLSGTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMH 1094
            G +LP  GTV +++ D  KP    +A+    +G+ IV+T GTA  +E  GI V  V K+ 
Sbjct: 944  GSRLPEKGTVLMTVKDSDKPRAVEVARTLHTLGYPIVATRGTASAIEAAGIPVRVVNKVK 1003

Query: 1095 EGRPHAGDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAI 1154
            +GRPH  DM+ NG++ ++  T         D   +R   LA +V   TT++GA A  E +
Sbjct: 1004 DGRPHIVDMIKNGELALVFTTVDETRAAIADSRSIRTAALANRVTYYTTIAGARAAVEGL 1063

Query: 1155 RSLKS 1159
            + L++
Sbjct: 1064 KHLQN 1068


>gi|407699596|ref|YP_006824383.1| carbamoyl phosphate synthase large subunit [Alteromonas macleodii
            str. 'Black Sea 11']
 gi|407248743|gb|AFT77928.1| carbamoyl phosphate synthase large subunit [Alteromonas macleodii
            str. 'Black Sea 11']
          Length = 1073

 Score = 1231 bits (3185), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 621/1076 (57%), Positives = 781/1076 (72%), Gaps = 18/1076 (1%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILI+GAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIQSILIIGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  E+V +++EKERPDA+LPTMGGQTALN A+ L + G LE++G ELIGA  DA
Sbjct: 63   ATYIEPIHWEVVRKIIEKERPDAILPTMGGQTALNCALELDKHGVLEEFGCELIGATADA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAE+R+ F +AMK IG++ P + I +++DE   + + IG FP IIRP+FT+GGTGGGI
Sbjct: 123  IDKAENRERFDKAMKNIGLECPRAEIAHSMDEAHDVLSRIG-FPCIIRPSFTMGGTGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN +EF  IC  GL  S T+++L+++SLLGWKEYE+EV+RD ADN +I+C+IEN DPMG
Sbjct: 182  AYNIDEFNEICTRGLDLSPTNELLIDESLLGWKEYEMEVVRDKADNCIIVCTIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKE+Q +R+ ++A++REIGVE GGSNVQF V+P  G +++IEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEFQLMRNAAMAVLREIGVETGGSNVQFGVDPKTGRMVIIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKK-TPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT   TPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGYTLDELANDITGGLTPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            F FEKF G+   LTTQMKSVGE MA+GR  QES QKALR LE G SG       E     
Sbjct: 362  FNFEKFAGANDRLTTQMKSVGEVMAIGRNQQESLQKALRGLEVGASGLNPMVDLEDPESR 421

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
             ++ Y LR P  +R+  I  A + GM V+E+  L+ ID+W+L Q ++LI +E  +    +
Sbjct: 422  NKVVYELRQPGAERIWYIGDAFRMGMTVEEVFNLTNIDRWYLVQLEDLILLEAKVAELGL 481

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
              +  D    +KR+GFSD ++A  TK  E ++RE R   G+ P YKRVDTCAAEF  +T 
Sbjct: 482  PGIDADFMRALKRKGFSDARLAELTKVAESDIRETRRGFGISPVYKRVDTCAAEFSTSTA 541

Query: 627  YMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSN 686
            YMYS+YD ECE+APT K K+++LGGGPNRIGQGIEFDYCC H + S++  GYETIM+N N
Sbjct: 542  YMYSTYDEECEAAPTDKDKIMVLGGGPNRIGQGIEFDYCCVHAALSMREDGYETIMVNCN 601

Query: 687  PETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHR 746
            PETVSTDYDTSDRLYFEP+T+EDVL +++ E+P+G+IVQ+GGQTPLKL+          R
Sbjct: 602  PETVSTDYDTSDRLYFEPVTLEDVLEIVEKEKPKGVIVQYGGQTPLKLA----------R 651

Query: 747  LPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEIG 806
               A+G   V I GTSP++ID AEDRERF  ++ +L+++QP      +   AL +A+EIG
Sbjct: 652  ALEAAG---VPIMGTSPEAIDRAEDRERFQQMVNKLNLKQPANATVTNVEQALTMAEEIG 708

Query: 807  YPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALAD 866
            +P+VVRPSYVLGGRAMEIVY  + L  YL  AV+V  + PVL+D++L DAIE+D+DA+ D
Sbjct: 709  FPLVVRPSYVLGGRAMEIVYDLKDLKRYLNEAVKVSNDAPVLLDRFLDDAIEVDIDAICD 768

Query: 867  SCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNC 926
                VVIGGIMEHIEQAGVHSGDSAC +P  ++S    D +      +A  L V GLMN 
Sbjct: 769  G-KEVVIGGIMEHIEQAGVHSGDSACSLPPHSLSKEIQDVMREQVRAMALELGVVGLMNT 827

Query: 927  QYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPKH 986
            Q+AI   G+VYL+E NPRA+RTVPFVSKA G PLAK AA  M+G SL + G T+EVIP  
Sbjct: 828  QFAI-KDGEVYLIEVNPRAARTVPFVSKATGVPLAKVAARAMAGVSLAEQGVTEEVIPPF 886

Query: 987  VSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVFL 1046
             SVKE VLPF KFQG D LLGPEMRSTGEVMG+  +F  A+AKA + AG  LP  G   +
Sbjct: 887  YSVKEVVLPFAKFQGVDPLLGPEMRSTGEVMGVGDTFEEAYAKANLGAGAPLPKQGKALI 946

Query: 1047 SLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVAN 1106
            S+ +  KP +  +AKA +  GF I +T GTA  L   GI    V K+ EGRP+  D + N
Sbjct: 947  SVRETDKPKIIELAKALVAAGFSIEATRGTATALYDAGIMSTVVNKLSEGRPNIVDAIKN 1006

Query: 1107 GQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTV 1162
            G+   ++ T+ G      D + +RR  L  KV   TT++ A A   A  +   N V
Sbjct: 1007 GEYAYLINTTEGRQA-ITDSVYIRREALVNKVTYTTTMNAAFATIRAKSADDRNKV 1061


>gi|383936852|ref|ZP_09990271.1| carbamoyl-phosphate synthase large subunit [Rheinheimera nanhaiensis
            E407-8]
 gi|383702089|dbj|GAB60362.1| carbamoyl-phosphate synthase large subunit [Rheinheimera nanhaiensis
            E407-8]
          Length = 1073

 Score = 1231 bits (3185), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 617/1063 (58%), Positives = 771/1063 (72%), Gaps = 18/1063 (1%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTDL+ ILILGAGPIVIGQACEFDYSG QACKALKEEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDLKSILILGAGPIVIGQACEFDYSGAQACKALKEEGYRVILVNSNPATIMTDPEMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  ++VE+++ KERP A+LPTMGGQTALN A+ L   G L KY VE+IGA  DA
Sbjct: 63   ATYIEPIHWQVVEKIIAKERPCAVLPTMGGQTALNCALDLERHGVLAKYNVEMIGATADA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  F +AM++IG+  P +G+ ++++E   +  +IG FP IIRP+FT+GG+GGGI
Sbjct: 123  IDKAEDRSRFDKAMRSIGLACPRAGLAHSMEEAYQVLEDIG-FPCIIRPSFTMGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEFE IC  GL  S T ++L+++SL+GWKEYE+EV+RD  DN +I+C+IEN DPMG
Sbjct: 182  AYNREEFEEICTRGLDLSPTKELLIDESLIGWKEYEMEVVRDKNDNCIIVCAIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGVE GGSNVQF +NP+DG +++IEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQIMRNASLAVLREIGVETGGSNVQFGINPLDGRMVIIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL++GY+LD++ NDIT  KTPASFEPSIDYVVTK+PR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAIGYTLDELANDITGGKTPASFEPSIDYVVTKVPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            F FEKF G+   LTTQMKSVGE MA+GR  QES QKALR LE G  G        L    
Sbjct: 362  FNFEKFAGANDRLTTQMKSVGEVMAIGRNQQESLQKALRGLEIGVCGLDPIIDITLPEAK 421

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
            +++   L+ P   R+  I  AM+ GM +DEI  L+ ID+WFL Q ++L+  E  L     
Sbjct: 422  DKIIRELKEPGSHRIWYIADAMRLGMSMDEIFSLTNIDRWFLVQIEDLVKEELALGKDGF 481

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
            + +       +KR+GF+DK+IA     +E EVR+KR S  + P YKRVDTCAAEF +NT 
Sbjct: 482  AALDAARIARLKRKGFADKRIADVLGVSENEVRKKRYSFNIHPVYKRVDTCAAEFASNTA 541

Query: 627  YMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSN 686
            YMYSSYD ECE+APT + K++I+GGGPNRIGQGIEFDYCC H + +L+  GYETIM+N N
Sbjct: 542  YMYSSYDEECEAAPTNRDKIMIIGGGPNRIGQGIEFDYCCVHAALALREDGYETIMVNCN 601

Query: 687  PETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHR 746
            PETVSTDYDTSDRLYFEP+T+EDVL ++  E+P+G+IVQ+GGQTPLKL+          R
Sbjct: 602  PETVSTDYDTSDRLYFEPITLEDVLEIVRKEQPKGVIVQYGGQTPLKLA----------R 651

Query: 747  LPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEIG 806
               A+G   V I GTSPD+ID AEDRERF   ++ L ++QPK     S  +A+  A +IG
Sbjct: 652  ALEANG---VPIIGTSPDAIDRAEDRERFQQAVERLGLKQPKNATVTSLEEAITKAADIG 708

Query: 807  YPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALAD 866
            +P+VVRPSYVLGGRAMEIVY ++ L  Y+  AV V  + PVL+D +L DAIE+D+DA+ D
Sbjct: 709  FPMVVRPSYVLGGRAMEIVYDEQDLRRYMNEAVSVSNDSPVLLDNFLDDAIEVDIDAICD 768

Query: 867  SCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNC 926
                VVIGGIMEHIEQAGVHSGDSAC +P  ++S    D +     KLA  L V GLMN 
Sbjct: 769  G-KEVVIGGIMEHIEQAGVHSGDSACTLPPHSLSKDIQDVMREQVRKLALELGVVGLMNT 827

Query: 927  QYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPKH 986
            Q+A+   G+VYL+E NPRA+RTVPFVSKA G  +AK  A  M+G+SL D G TKE+IP  
Sbjct: 828  QFAV-KDGEVYLIEVNPRAARTVPFVSKATGVAVAKVGARCMAGRSLADQGVTKEIIPPF 886

Query: 987  VSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVFL 1046
             SVKE V+PF KF G D +LGPEMRSTGEVMG+  +F  AFAK Q+ A   +P  G   L
Sbjct: 887  FSVKEVVIPFNKFPGVDPILGPEMRSTGEVMGVGDTFEQAFAKGQLGASTVIPTGGRALL 946

Query: 1047 SLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVAN 1106
            S+ D  K  +  +AK  +  GF++ +T GTA  L+  GI   RV K+ EGRPH  D + N
Sbjct: 947  SVRDSDKVRVIDLAKRMVAKGFELDATGGTAMALQAAGIECRRVNKVSEGRPHILDRIKN 1006

Query: 1107 GQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALA 1149
            G+   +V T+ G    + D   +RR  L YK    TT++ A A
Sbjct: 1007 GEYSYIVNTTDGRQAIE-DSKVIRRGALQYKANYTTTLNAAFA 1048


>gi|429087844|ref|ZP_19150576.1| Carbamoyl-phosphate synthase large chain [Cronobacter universalis
            NCTC 9529]
 gi|426507647|emb|CCK15688.1| Carbamoyl-phosphate synthase large chain [Cronobacter universalis
            NCTC 9529]
          Length = 1074

 Score = 1231 bits (3185), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 616/1078 (57%), Positives = 786/1078 (72%), Gaps = 19/1078 (1%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILILGAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  E+V +++EKERPDA+LPTMGGQTALN A+ L   G LE++GV +IGA  DA
Sbjct: 63   ATYIEPIHWEVVRKIIEKERPDAVLPTMGGQTALNCALELERQGVLEEFGVTMIGATADA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  F  AMK IG+ T  SGI + ++E +++A ++G +P IIRP+FT+GGTGGGI
Sbjct: 123  IDKAEDRRRFDVAMKKIGLDTARSGIAHNMEEALAVAADVG-YPCIIRPSFTMGGTGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEFE IC  GL  S T ++L+++SL+GWKEYE+EV+RD  DN +I+CSIEN D MG
Sbjct: 182  AYNREEFEEICARGLDLSPTKELLIDESLIGWKEYEMEVVRDKNDNCIIVCSIENFDAMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            +HTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGVE GGSNVQFAVNP +G ++VIEMN
Sbjct: 242  IHTGDSITVAPAQTLTDKEYQIMRNASMAVLREIGVETGGSNVQFAVNPKNGRLIVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT  +TPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGYTLDELMNDITGGRTPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            F FEKF G+   LTTQMKSVGE MA+GRT QES QKALR LE G +G+      +     
Sbjct: 362  FNFEKFAGANDRLTTQMKSVGEVMAIGRTQQESMQKALRGLEVGATGFDPKVSLDDPEAL 421

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
             +++  L+    +R+  I  A + G+ VD +  L+ ID+WFL Q +EL+ +E+ +  Q +
Sbjct: 422  TKIRRELKDAGAERIWYIADAFRAGLSVDGVFNLTNIDRWFLVQIEELVRLEEQVAEQGI 481

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
            + ++ D    +KR+GF+D ++A     +E E+R+ R    + P YKRVDTCAAEF  +T 
Sbjct: 482  NGLSADFLRMLKRKGFADARLAKLAGVSESEIRKLREQYNLHPVYKRVDTCAAEFSTDTA 541

Query: 627  YMYSSYDFECESAPTQ-KKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNS 685
            YMYS+Y+ ECE+ P Q ++K+++LGGGPNRIGQGIEFDYCC H + +L+  GYETIM+N 
Sbjct: 542  YMYSTYEEECEANPNQDREKIMVLGGGPNRIGQGIEFDYCCVHAALALREDGYETIMVNC 601

Query: 686  NPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEH 745
            NPETVSTDYDTSDRLYFEP+T+EDVL ++ +E+P+G+IVQ+GGQTPLKL+          
Sbjct: 602  NPETVSTDYDTSDRLYFEPVTLEDVLEIVRIEKPKGVIVQYGGQTPLKLA---------- 651

Query: 746  RLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEI 805
            R   A+G   V + GTSPD+ID AEDRERF   +  L ++QP      +   A+  AKEI
Sbjct: 652  RALEAAG---VPVIGTSPDAIDRAEDRERFQQAVDRLKLKQPANATVTAIEQAVEKAKEI 708

Query: 806  GYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALA 865
            GYP+VVRPSYVLGGRAMEIVY +  L  Y + AV V  + PVL+D++L DA+E+DVDA+ 
Sbjct: 709  GYPLVVRPSYVLGGRAMEIVYDEADLRRYFQTAVSVSNDAPVLLDRFLDDAVEVDVDAIC 768

Query: 866  DSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMN 925
            D    V+IGGIMEHIEQAGVHSGDSAC +P  T+S    D +     KLA  L V GLMN
Sbjct: 769  DG-ETVLIGGIMEHIEQAGVHSGDSACSLPAYTLSQEIQDVMRQQVQKLAFELQVRGLMN 827

Query: 926  CQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPK 985
             Q+A+  + +VYL+E NPRA+RTVPFVSKA G PLAK AA VM+GK+L++ G TKE+IP 
Sbjct: 828  VQFAVKDN-EVYLIEVNPRAARTVPFVSKATGVPLAKVAARVMAGKTLSEQGVTKEIIPP 886

Query: 986  HVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVF 1045
            + SVKE VLPF KF G D LLGPEMRSTGEVMG+  +F  AFAKAQ+ +   +   G   
Sbjct: 887  YYSVKEVVLPFNKFPGVDPLLGPEMRSTGEVMGVGRTFAEAFAKAQLGSNSTMKKQGRAL 946

Query: 1046 LSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVA 1105
            LS+ +  K  +  +A   L  GF++ +T GTA  L   GI    V K+HEGRPH  D + 
Sbjct: 947  LSVREGDKERVVDLAAKLLKFGFELDATHGTAIVLGEAGINPRLVNKVHEGRPHIQDRIK 1006

Query: 1106 NGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTVT 1163
            NG+   ++ T++G    + D   +RR  L YKV   TT++G  A A A+ +  +  VT
Sbjct: 1007 NGEYTYIINTTAGRQAIE-DSKLIRRSALQYKVHYDTTLNGGFATAMALNADATEKVT 1063


>gi|92115200|ref|YP_575128.1| carbamoyl-phosphate synthase large subunit [Chromohalobacter
            salexigens DSM 3043]
 gi|91798290|gb|ABE60429.1| carbamoyl-phosphate synthase large subunit [Chromohalobacter
            salexigens DSM 3043]
          Length = 1076

 Score = 1231 bits (3185), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 623/1087 (57%), Positives = 795/1087 (73%), Gaps = 23/1087 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILI+GAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIQSILIIGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPVMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+T + V +++EKERPDA+LPTMGGQTALN A+ L + G LE YGVE+IGA   A
Sbjct: 63   ATYIEPITWQAVAKIIEKERPDAILPTMGGQTALNCALDLDKHGVLETYGVEMIGANAAA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDRDLF +AMK IG++ P + + + + E   I  E+G FP+IIRP++T+GG+GGG+
Sbjct: 123  INKAEDRDLFDKAMKNIGLECPKAKVAHRMSEAWEIQGELG-FPVIIRPSYTMGGSGGGV 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYNKEEFE IC  G   S   ++L+++SLLGWKEYE+EV+RD  DN +I+C+IEN DPMG
Sbjct: 182  AYNKEEFEEICTRGFELSNNHELLIDESLLGWKEYEMEVVRDKNDNCIIVCAIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ +RD S+A++REIGVE GGSNVQF V+P  G V+VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQIMRDASLAVLREIGVETGGSNVQFGVDPQTGRVVVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+L+++ NDIT  KTPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKIAAKLAVGYTLNELQNDITGGKTPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            F FEKFP +   LTTQMKSVGE MA+GRTFQES QKALR LE G  G      +  +   
Sbjct: 362  FTFEKFPQANDRLTTQMKSVGEVMAIGRTFQESLQKALRGLEIGADGLDPKVTEFNEAGM 421

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
              +K  L+    DR+  +  AM+ GM V+E+  L+ ID+WFL Q +EL+ +EQ L + S+
Sbjct: 422  ALIKGELQAAGADRIFFVADAMRAGMSVEEVFALTNIDRWFLVQLEELVRLEQQLASCSL 481

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
            S ++    + +KR+GFSD ++A     +EKE R+ R   G+ P YKRVDTCAAEF +NT 
Sbjct: 482  SELSAATLFRLKRKGFSDARLATLLGVSEKEFRKTRQKHGIRPVYKRVDTCAAEFASNTA 541

Query: 627  YMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSN 686
            YMYS+Y+ ECE+  + ++K+++LGGGPNRIGQGIEFDYCC H + +++  G+ETIM+N N
Sbjct: 542  YMYSTYEEECEAEVSDRQKIMVLGGGPNRIGQGIEFDYCCVHAALAMREDGFETIMVNCN 601

Query: 687  PETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHR 746
            PETVSTDYDTSDRLYFEP+T+EDVL + D E+P G+IVQFGGQTPLKL+          R
Sbjct: 602  PETVSTDYDTSDRLYFEPVTLEDVLEIADKEKPAGVIVQFGGQTPLKLA----------R 651

Query: 747  LPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEIG 806
               A+G   V I GT+PD+ID AEDRERF  +I +L ++QP    A+S  DA A A++IG
Sbjct: 652  ELEAAG---VPIIGTTPDAIDRAEDRERFQQMIDKLGLKQPPNATARSFEDAFAKAEKIG 708

Query: 807  YPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALAD 866
            YP+VVRPSYVLGGRAMEIVY    L  Y+ +AV+V  + PVL+D +L+ AIE+D+DA++D
Sbjct: 709  YPLVVRPSYVLGGRAMEIVYDAAELEGYMTHAVKVSNDSPVLLDHFLNAAIEVDIDAVSD 768

Query: 867  SCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNC 926
                VVIGGIM+HIEQAGVHSGDSAC +P  ++ +   D +     ++A  LNV GLMN 
Sbjct: 769  G-EQVVIGGIMQHIEQAGVHSGDSACSLPPYSLPAHVQDEMRDQVKRMALELNVVGLMNV 827

Query: 927  QYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPKH 986
            Q A     ++Y++E NPRASRTVPFVSK IG  LA+ AA  M+GK+L +  FT E IP +
Sbjct: 828  QLAWQDD-EIYVIEVNPRASRTVPFVSKCIGTSLAQVAARCMAGKTLGEQDFTLERIPGY 886

Query: 987  VSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLP-LSG--T 1043
             SVKEAV PF KF G D +L PEM+STGEVMG  ++F  AF KAQ++AG+ +P L G   
Sbjct: 887  YSVKEAVFPFNKFPGVDPILSPEMKSTGEVMGSGVTFAEAFYKAQLSAGEAIPRLDGERK 946

Query: 1044 VFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDM 1103
             FLS+ D  K  +  +A+  L +GF +++T GTA  LE  G+ V+ V K++EGRPH  DM
Sbjct: 947  AFLSVRDPDKREIIEVAQFLLALGFSLIATRGTAIALEAVGLPVKVVNKVYEGRPHIVDM 1006

Query: 1104 VANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTVT 1163
            + N ++  +V T+ G      D   +RR  LA KVP  TT++GA A   A+     N +T
Sbjct: 1007 LKNDEVAYIVNTTEGRQAIS-DSSVIRRTALARKVPYATTLAGARAVCMALEY--GNEIT 1063

Query: 1164 MTALQDF 1170
            +  LQ+ 
Sbjct: 1064 VRRLQEL 1070


>gi|351728199|ref|ZP_08945890.1| carbamoyl-phosphate synthase large subunit [Acidovorax radicis N35]
          Length = 1088

 Score = 1231 bits (3184), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 636/1089 (58%), Positives = 804/1089 (73%), Gaps = 39/1089 (3%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILI+GAGPI+IGQACEFDYSG QACKAL+EEGY+VILINSNPATIMTDP  AD
Sbjct: 3    KRTDIQSILIIGAGPIIIGQACEFDYSGVQACKALREEGYKVILINSNPATIMTDPATAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+T + VE+++ KERPDA+LPTMGGQTALN A+ L  +G L+KY VELIGA  +A
Sbjct: 63   VTYIEPITWQTVEKIIAKERPDAILPTMGGQTALNCALDLWHNGVLDKYKVELIGATPEA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  FK AM  IG+ +  SGI ++++E   +  ++G FP +IRP+FTLGGTGGGI
Sbjct: 123  IDKAEDRLKFKDAMTKIGLGSARSGIAHSMEEAWGVQKQVG-FPTVIRPSFTLGGTGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN EEFE ICK GL AS T+++L+E+SLLGWKEYE+EV+RD ADN +IICSIEN+DPMG
Sbjct: 182  AYNPEEFETICKRGLEASPTNELLIEESLLGWKEYEMEVVRDKADNCIIICSIENLDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGV+ GGSNVQF++NP DG ++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQIMRNASLAVLREIGVDTGGSNVQFSINPKDGRMVVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKK-TPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ N+IT   TPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGYTLDELRNEITGGITPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            FAFEKFP ++  LTTQMKSVGE MA+GRTFQESFQKALR LE G  G     + E   D 
Sbjct: 362  FAFEKFPTADSRLTTQMKSVGEVMAMGRTFQESFQKALRGLEVGVDG-----MNEKTQDR 416

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELI----DVEQFLL 562
            E L+  L  P P+R+  +  A   G+ VDE+ +L+ IDKWFL Q ++++    D+++ + 
Sbjct: 417  EVLEKELGEPGPERIWYVGDAFAMGLSVDEVFDLTKIDKWFLVQIEQIVKIELDIDKLVA 476

Query: 563  TQ---SVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAA 619
             +   +++ +     + +K++GFSD+++A   K+TEK VRE R +L V P YKRVDTCAA
Sbjct: 477  DKGEGALAALDAGTLFTLKQKGFSDRRLAKLLKTTEKAVREARHALNVRPVYKRVDTCAA 536

Query: 620  EFEANTPYMYSSYD-------FECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFS 672
            EF  NT Y+YS+Y+        ECES PT  KK+++LGGGPNRIGQGIEFDYCC H + +
Sbjct: 537  EFATNTAYLYSTYEAATHGGVAECESEPTSNKKIMVLGGGPNRIGQGIEFDYCCVHAALA 596

Query: 673  LQSAGYETIMMNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPL 732
            ++  GYETIM+N NPETVSTDYDTSDRLYFEP+T+EDVL ++D E+P G+IVQ+GGQTPL
Sbjct: 597  MREDGYETIMVNCNPETVSTDYDTSDRLYFEPVTLEDVLEIVDKEKPVGVIVQYGGQTPL 656

Query: 733  KLSLPIHQYLDEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIA 792
            KL+L +           A+G   V I GTSPD IDAAEDRERF  ++ EL + QP    A
Sbjct: 657  KLALGLE----------AAG---VPIIGTSPDMIDAAEDRERFQKLLGELGLRQPPNATA 703

Query: 793  KSEADALAIAKEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKY 852
            ++E +AL  A  +GYP+VVRPSYVLGGRAMEIV+    L  Y+  AV+V  + PVL+D++
Sbjct: 704  RTEPEALEKAAALGYPLVVRPSYVLGGRAMEIVHEQRDLERYMREAVKVSNDSPVLLDRF 763

Query: 853  LSDAIEIDVDALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTI 912
            LS+AIE DVD + DS G   IGG+MEHIEQAGVHSGDSAC +P   +S   +D I   T 
Sbjct: 764  LSNAIECDVDCVRDSAGVTFIGGVMEHIEQAGVHSGDSACSLPPYYLSQPTIDEIKRQTA 823

Query: 913  KLAKRLNVCGLMNCQYAITTSGD---VYLLEANPRASRTVPFVSKAIGHPLAKYAALVMS 969
             +A+ L+V GLMN Q+AI        +Y+LE NPRASRTVPFVSKA G  LAK AA  M+
Sbjct: 824  AMAEGLSVVGLMNVQFAIQEVDGKDVIYVLEVNPRASRTVPFVSKATGIQLAKVAARCMA 883

Query: 970  GKSLNDLGFTKEVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAK 1029
            G++L   G TKEV P + SVKEAV PF KF G D +LGPEM+STGEVMG+  +F  AF K
Sbjct: 884  GQTLASQGITKEVTPPYFSVKEAVFPFVKFPGVDTILGPEMKSTGEVMGVGKTFGEAFVK 943

Query: 1030 AQIAAGQKLPLSGTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVER 1089
            +Q+ AG KLP SG VFL++ +  KP    IA+  + +GF++V+T GTA  +E  G+ V+ 
Sbjct: 944  SQLGAGTKLPTSGKVFLTVKNADKPRAVDIARQLVALGFELVATKGTAAAIEAAGVPVKV 1003

Query: 1090 VLKMHEGRPHAGDMVANGQIQMMVITSSGDSLDQI-DGLKLRRRGLAYKVPVITTVSGAL 1148
            V K+ EGRPH  DM+ N +I +MVI +  +  + I D   +R   L  +V   TT+ GA 
Sbjct: 1004 VNKVTEGRPHIVDMIKNNEI-VMVINTVEERRNAIADSRAIRTSSLLARVTTFTTIFGAE 1062

Query: 1149 ANAEAIRSL 1157
            A  E ++ L
Sbjct: 1063 AAVEGMKYL 1071


>gi|261253796|ref|ZP_05946369.1| carbamoyl-phosphate synthase large chain [Vibrio orientalis CIP
            102891 = ATCC 33934]
 gi|417953470|ref|ZP_12596515.1| carbamoyl phosphate synthase large subunit [Vibrio orientalis CIP
            102891 = ATCC 33934]
 gi|260937187|gb|EEX93176.1| carbamoyl-phosphate synthase large chain [Vibrio orientalis CIP
            102891 = ATCC 33934]
 gi|342817071|gb|EGU51958.1| carbamoyl phosphate synthase large subunit [Vibrio orientalis CIP
            102891 = ATCC 33934]
          Length = 1076

 Score = 1231 bits (3184), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 614/1065 (57%), Positives = 780/1065 (73%), Gaps = 22/1065 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTDL+ ILILGAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDLKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPDMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  E+V +++EKERPDA+LPTMGGQTALN A+ L + G LE++GVE+IGA  DA
Sbjct: 63   ATYIEPIQWEVVRKIIEKERPDAVLPTMGGQTALNCALDLEKHGVLEEFGVEMIGATADA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  F +AMK+IG++ P +    T++E   + + +G FP IIRP+FT+GGTGGGI
Sbjct: 123  IDKAEDRSRFDKAMKSIGLECPRADTAKTMEEAYGVLDMVG-FPCIIRPSFTMGGTGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYNKEEFE IC+ GL  S T+++L+++SL+GWKEYE+EV+RD ADN +I+C+IEN DPMG
Sbjct: 182  AYNKEEFEEICRRGLDLSPTNELLIDESLIGWKEYEMEVVRDKADNCIIVCAIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            +HTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGVE GGSNVQF +NP DG +++IEMN
Sbjct: 242  IHTGDSITVAPAQTLTDKEYQLMRNASLAVLREIGVETGGSNVQFGINPKDGRMVIIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT   TPASFEP+IDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKIAAKLAVGYTLDELQNDITGGATPASFEPTIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWD- 505
            F FEKF G+   LTTQMKSVGE MA+GR  QES QKALR LE G +G+    + +LD   
Sbjct: 362  FNFEKFAGANDRLTTQMKSVGEVMAIGRNQQESLQKALRGLEVGATGF--DEMVDLDAPD 419

Query: 506  -WEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQ 564
                +++ L+    +R+  I  A + GM VD +  L+ ID+WFL Q ++++ +EQ L  +
Sbjct: 420  ALTTIRHELKEAGAERIWYIADAFRAGMSVDGVFNLTQIDRWFLVQIEDIVKLEQELKAK 479

Query: 565  SVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEAN 624
              + + KD+  ++KR+GF+D +++     +E E+R  R    + P YKRVDTCAAEF ++
Sbjct: 480  GFAGLNKDELKKLKRKGFADARLSKILGVSESEIRRLRDQYDIHPVYKRVDTCAAEFSSD 539

Query: 625  TPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMN 684
            T YMYSSYD ECE+ PT K+K++ILGGGPNRIGQGIEFDYCC H S +L+  GYETIM+N
Sbjct: 540  TAYMYSSYDDECEANPTDKEKIMILGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVN 599

Query: 685  SNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDE 744
             NPETVSTDYDTSDRLYFEP+T+EDVL ++ +E+P+G+IVQ+GGQTPLKL+         
Sbjct: 600  CNPETVSTDYDTSDRLYFEPVTLEDVLAIVRVEKPKGVIVQYGGQTPLKLA--------- 650

Query: 745  HRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKE 804
             R   A+G   V I GTSPD+ID AEDRERF   +  L + QP+     +   A+  ++E
Sbjct: 651  -RALEAAG---VPIIGTSPDAIDRAEDRERFQVAVDRLGLLQPENATVTTMEQAIEKSRE 706

Query: 805  IGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDAL 864
            IG+P+VVRPSYVLGGRAMEIVY ++ L  Y   AV V  E PVL+D +L DA+E+D+DA+
Sbjct: 707  IGFPLVVRPSYVLGGRAMEIVYDEQDLRRYFNEAVSVSNESPVLLDSFLDDAVEVDIDAI 766

Query: 865  ADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLM 924
             D    VVIGGIMEHIEQAGVHSGDSAC +P  T+S    D +     KLA  L V GLM
Sbjct: 767  CDG-ERVVIGGIMEHIEQAGVHSGDSACSLPAYTLSQEIQDVMREQVEKLAFELGVRGLM 825

Query: 925  NCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIP 984
            N Q+A+  +  VYL+E NPRA+RTVPFVSKA G P+AK AA VM+G+SL   GFTKE+IP
Sbjct: 826  NTQFAVKNN-QVYLIEVNPRAARTVPFVSKATGAPIAKIAARVMAGQSLESQGFTKEIIP 884

Query: 985  KHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTV 1044
             + SVKE VLPF KF G D LLGPEMRSTGEVMG+  +F  A++KA++  G   P  G  
Sbjct: 885  PYYSVKEVVLPFNKFPGVDPLLGPEMRSTGEVMGVGATFAEAYSKAELGCGNVYPEGGRA 944

Query: 1045 FLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMV 1104
             LS+ +  K  +  +A     +G+++ +T GTA  L   GI    V K+HEGRPH  D +
Sbjct: 945  LLSVREGDKERVVDLASKLSKLGYQLDATHGTAVILGEAGINPRLVNKVHEGRPHILDRI 1004

Query: 1105 ANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALA 1149
             N +   +V T++G    + D   LRR  LA KV   TT++ A A
Sbjct: 1005 KNNEYTYIVNTAAGRQAIE-DSKVLRRGALAEKVNYTTTLNAAFA 1048



 Score =  254 bits (648), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 164/429 (38%), Positives = 243/429 (56%), Gaps = 26/429 (6%)

Query: 67  KIDS-SAELSNGAA----SSKDQKLGKRTDLRKILILGAGPIVIGQACEFDYSGTQACKA 121
           ++D+ +AE S+  A    S  D+     TD  KI+ILG GP  IGQ  EFDY    A  A
Sbjct: 528 RVDTCAAEFSSDTAYMYSSYDDECEANPTDKEKIMILGGGPNRIGQGIEFDYCCVHASLA 587

Query: 122 LKEEGYEVILINSNPATIMTDPGLADRTYITPMTPELVEQVLEKERPDALLPTMGGQTAL 181
           L+E+GYE I++N NP T+ TD   +DR Y  P+T E V  ++  E+P  ++   GGQT L
Sbjct: 588 LREDGYETIMVNCNPETVSTDYDTSDRLYFEPVTLEDVLAIVRVEKPKGVIVQYGGQTPL 647

Query: 182 NLAVALAESGALEKYGVELIGAKLDAIKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECI 241
            LA       ALE  GV +IG   DAI +AEDR+ F+ A+  +G+  P +    T+++ I
Sbjct: 648 KLA------RALEAAGVPIIGTSPDAIDRAEDRERFQVAVDRLGLLQPENATVTTMEQAI 701

Query: 242 SIANEIGEFPLIIRPAFTLGGTGGGIAYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKE 301
             + EIG FPL++RP++ LGG    I Y++++        ++ S  S VL++  L    E
Sbjct: 702 EKSREIG-FPLVVRPSYVLGGRAMEIVYDEQDLRRYFNEAVSVSNESPVLLDSFLDDAVE 760

Query: 302 YELEVMRDLADNVVIICSIENVDPMGVHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREI 361
            +++ + D  + VVI   +E+++  GVH+GDS    PA TL+ +    +R+    +  E+
Sbjct: 761 VDIDAICD-GERVVIGGIMEHIEQAGVHSGDSACSLPAYTLSQEIQDVMREQVEKLAFEL 819

Query: 362 GVECGGSNVQFAVNPVDGEVMVIEMNPRVSRSSALASKATGFPIAKMAAKLSVGYSLDQI 421
           GV  G  N QFAV   + +V +IE+NPR +R+    SKATG PIAK+AA++  G SL+  
Sbjct: 820 GVR-GLMNTQFAVK--NNQVYLIEVNPRAARTVPFVSKATGAPIAKIAARVMAGQSLES- 875

Query: 422 PNDITKKTPASFEPSIDYVVTKIPRFAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQ 481
               TK+    +     Y V ++    F KFPG +PLL  +M+S GE M +G TF E++ 
Sbjct: 876 -QGFTKEIIPPY-----YSVKEVV-LPFNKFPGVDPLLGPEMRSTGEVMGVGATFAEAYS 928

Query: 482 KALRSLECG 490
           KA   L CG
Sbjct: 929 KA--ELGCG 935


>gi|419919078|ref|ZP_14437246.1| carbamoyl phosphate synthase large subunit [Escherichia coli KD2]
 gi|388388741|gb|EIL50299.1| carbamoyl phosphate synthase large subunit [Escherichia coli KD2]
          Length = 1072

 Score = 1231 bits (3184), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 618/1070 (57%), Positives = 782/1070 (73%), Gaps = 18/1070 (1%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILILGAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  E+V +++EKERPDA+LPTMGGQTALN A+ L   G LE++GV +IGA  DA
Sbjct: 63   ATYIEPIHWEVVRKIIEKERPDAVLPTMGGQTALNCALELERQGVLEEFGVTMIGATADA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  F  AMK IG++T  SGI +T++E +++A ++G FP IIRP+FT+GG+GGGI
Sbjct: 123  IDKAEDRRRFDVAMKKIGLETARSGIAHTMEEALAVAADVG-FPCIIRPSFTMGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEFE IC  GL  S T ++L+++SL+GWKEYE+EV+RD  DN +I+CSIEN D MG
Sbjct: 182  AYNREEFEEICARGLDLSPTKELLIDESLIGWKEYEMEVVRDKNDNCIIVCSIENFDAMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            +HTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGVE GGSNVQFAVNP +G ++VIEMN
Sbjct: 242  IHTGDSITVAPAQTLTDKEYQIMRNASMAVLREIGVETGGSNVQFAVNPKNGRLIVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT  +TPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGYTLDELMNDITGGRTPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            F FEKF G+   LTTQMKSVGE MA+GRT QES QKALR LE G +G+      +     
Sbjct: 362  FNFEKFAGANDRLTTQMKSVGEVMAIGRTQQESLQKALRGLEVGATGFDPKVSLDDPEAL 421

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
             +++  L+    +R+  I  A + G+ VD +  L+ ID+WFL Q +EL+ +E+ +    +
Sbjct: 422  TKIRRELKDAGAERIWYIADAFRAGLSVDGVFNLTNIDRWFLVQIEELVRLEEKVAEVGI 481

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
            + +  D   ++KR+GF+D ++A      E E+R+ R    + P YKRVDTCAAEF  +T 
Sbjct: 482  TGLNADFLRQLKRKGFADARLAKLAGVREAEIRKLRDQYDLHPVYKRVDTCAAEFATDTA 541

Query: 627  YMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSN 686
            YMYS+Y+ ECES P+ ++K+++LGGGPNRIGQGIEFDYCC H S +L+  GYETIM+N N
Sbjct: 542  YMYSTYEEECESNPSDREKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVNCN 601

Query: 687  PETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHR 746
            PETVSTDYDTSDRLYFEP+T+EDVL ++ +E+P+G+IVQ+GGQTPLKL+          R
Sbjct: 602  PETVSTDYDTSDRLYFEPVTLEDVLEIVRIEKPKGVIVQYGGQTPLKLA----------R 651

Query: 747  LPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEIG 806
               A+G   V + GTSPD+ID AEDRERF   ++ L ++QP      +   A+  AKEIG
Sbjct: 652  ALEAAG---VPVIGTSPDAIDRAEDRERFQHAVERLKLKQPANATVTAIEMAVEKAKEIG 708

Query: 807  YPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALAD 866
            YP+VVRPSYVLGGRAMEIVY +  L  Y + AV V  + PVL+D +L DA+E+DVDA+ D
Sbjct: 709  YPLVVRPSYVLGGRAMEIVYDEADLRRYFQTAVSVSNDAPVLLDHFLDDAVEVDVDAICD 768

Query: 867  SCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNC 926
                V+IGGIMEHIEQAGVHSGDSAC +P  T+S    D +     KLA  L V GLMN 
Sbjct: 769  G-EMVLIGGIMEHIEQAGVHSGDSACSLPAYTLSQEIQDVMRQQVQKLAFELQVRGLMNV 827

Query: 927  QYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPKH 986
            Q+A+  + +VYL+E NPRA+RTVPFVSKA G PLAK AA VM+GKSL + G TKEVIP +
Sbjct: 828  QFAVKNN-EVYLIEVNPRAARTVPFVSKATGVPLAKVAARVMAGKSLAEQGVTKEVIPPY 886

Query: 987  VSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVFL 1046
             SVKE VLPF KF G D LLGPEMRSTGEVMG+  +F  AFAKAQ+ +   +   G   L
Sbjct: 887  YSVKEVVLPFNKFPGVDPLLGPEMRSTGEVMGVGRTFAEAFAKAQLGSNSTMKKHGRALL 946

Query: 1047 SLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVAN 1106
            S+ +  K  +  +A   L  GF++ +T GTA  L   GI    V K+HEGRPH  D + N
Sbjct: 947  SVREGDKERVVDLAAKLLKQGFELDATHGTAIVLGEAGINPRLVNKVHEGRPHIQDRIKN 1006

Query: 1107 GQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRS 1156
            G+   ++ T+SG    + D   +RR  L YKV   TT++G  A A A+ +
Sbjct: 1007 GEYTYIINTTSGRRAIE-DSRVIRRSALQYKVHYDTTLNGGFATAMALNA 1055


>gi|372273065|ref|ZP_09509113.1| carbamoyl-phosphate synthase, large subunit [Marinobacterium stanieri
            S30]
          Length = 1074

 Score = 1231 bits (3184), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 610/1056 (57%), Positives = 794/1056 (75%), Gaps = 23/1056 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILILGAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPVMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  + V +++EKERPDALLPTMGGQTALN A+ L   G L ++GVE+IGA  DA
Sbjct: 63   ATYIEPINWKTVAKIIEKERPDALLPTMGGQTALNCALDLDREGVLAEFGVEMIGATQDA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR+ F +AMK IG++ P + I ++++E + + + IG FP IIRP+FT+GG+GGGI
Sbjct: 123  IDKAEDRERFDKAMKNIGLECPRAAIAHSMEEALQVLDSIG-FPAIIRPSFTMGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEF  IC+ GL  S T+++L+++SL+GWKEYE+EV+RD  DN +I+CSIEN D MG
Sbjct: 182  AYNREEFIEICERGLDLSPTNELLIDESLIGWKEYEMEVVRDKNDNCIIVCSIENFDAMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ +R+ SIA++REIGVE GGSNVQF V+P  G V+VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQIMRNASIAVLREIGVETGGSNVQFGVDPETGRVVVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT  +TPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKIAAKLAVGYTLDELQNDITGGRTPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWD- 505
            F FEKFP +   LTTQMKSVGE MA+GR+ QES QKALR LE G  G+    V +LD + 
Sbjct: 362  FTFEKFPQANDRLTTQMKSVGEVMAIGRSQQESLQKALRGLEVGSVGF--DPVLDLDAED 419

Query: 506  -WEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQ 564
              +++   L  P   R+  I  A + GM VDEI++LS +D WFL Q ++LI  EQ +   
Sbjct: 420  ARDEIVAELTQPGAQRIWYIGDAFRLGMSVDEIYKLSGVDPWFLVQIEDLIKDEQRVSET 479

Query: 565  SVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEAN 624
            ++S + KD  + +KR+GFSD ++A     +EK+ R++R   GV P +KRVDTCAAEF  +
Sbjct: 480  ALSELDKDQIFRLKRKGFSDARLAQLLGVSEKQFRKQRQKQGVRPVFKRVDTCAAEFATD 539

Query: 625  TPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMN 684
            T YMYSSY+ ECE+ P+ + K++++GGGPNRIGQGIEFDYCC H + + +  GYETIM+N
Sbjct: 540  TAYMYSSYEEECEANPSDRDKIMVIGGGPNRIGQGIEFDYCCVHAALAAREDGYETIMVN 599

Query: 685  SNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDE 744
             NPETVSTDYDTSDRL+FEP+T+EDVL ++++E+P+G+IVQ+GGQTPLKL++ +      
Sbjct: 600  CNPETVSTDYDTSDRLFFEPITLEDVLEIVNVEQPKGVIVQYGGQTPLKLAVALE----- 654

Query: 745  HRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKE 804
                 A+G   V I GTSP++ID AEDRE+F  ++K L ++QP+    +S  +A+  A +
Sbjct: 655  -----AAG---VPIIGTSPEAIDRAEDREQFQQMLKRLGLKQPENATVRSLEEAIVEAGK 706

Query: 805  IGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDAL 864
            IGYP+VVRPSYVLGGRAMEIVY ++ L  Y+ +AV+V  + PVL+D +L+ A+E+D+DA+
Sbjct: 707  IGYPLVVRPSYVLGGRAMEIVYKEDELRRYMTSAVKVSNDAPVLLDHFLNAAVEVDIDAV 766

Query: 865  ADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLM 924
            +D    VVIG IM+HIEQAGVHSGDSAC  P  ++++   D +     K+A  L V GLM
Sbjct: 767  SDG-ETVVIGAIMQHIEQAGVHSGDSACSFPPYSLAADVQDEMRDMVRKMALELGVVGLM 825

Query: 925  NCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIP 984
            N Q A    G++Y++E NPRASRTVPFVSK IG  LA  AA VM+GK+L +LGFT+E++P
Sbjct: 826  NVQLAY-QDGEIYVIEVNPRASRTVPFVSKCIGTSLAAVAARVMTGKTLQELGFTEEIVP 884

Query: 985  KHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLP-LSGT 1043
            K  +VKEAV PF KFQG D +LGPEM+STGEVMG   +F  AF KAQI AG+K+P  +G 
Sbjct: 885  KFFNVKEAVFPFNKFQGVDPILGPEMKSTGEVMGTGATFGEAFMKAQIGAGEKMPSANGK 944

Query: 1044 VFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDM 1103
             F+S+ D+ K  +  +AK   ++GF +V+T GTA  LE  G++V RV K+ EGRP+  DM
Sbjct: 945  AFISVRDVDKAAVVPVAKDLAELGFALVATGGTAALLEESGLSVTRVNKVAEGRPNIVDM 1004

Query: 1104 VANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVP 1139
            + NG+I  ++ T+ G      D  ++RR  L +KVP
Sbjct: 1005 IKNGEISYVINTTEGRKA-IADSAEIRRSALQHKVP 1039


>gi|432768840|ref|ZP_20003220.1| carbamoyl-phosphate synthase large chain [Escherichia coli KTE50]
 gi|432958762|ref|ZP_20149620.1| carbamoyl-phosphate synthase large chain [Escherichia coli KTE202]
 gi|433061241|ref|ZP_20248215.1| carbamoyl-phosphate synthase large chain [Escherichia coli KTE125]
 gi|431320233|gb|ELG07876.1| carbamoyl-phosphate synthase large chain [Escherichia coli KTE50]
 gi|431483257|gb|ELH62949.1| carbamoyl-phosphate synthase large chain [Escherichia coli KTE202]
 gi|431589520|gb|ELI60734.1| carbamoyl-phosphate synthase large chain [Escherichia coli KTE125]
          Length = 1072

 Score = 1231 bits (3184), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 618/1070 (57%), Positives = 782/1070 (73%), Gaps = 18/1070 (1%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILILGAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  E+V +++EKERPDA+LPTMGGQTALN A+ L   G LE++GV +IGA  DA
Sbjct: 63   ATYIEPIHWEVVRKIIEKERPDAVLPTMGGQTALNCALELERQGVLEEFGVTMIGATADA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  F  AMK IG++T  SGI +T++E +++A ++G FP IIRP+FT+GG+GGGI
Sbjct: 123  IDKAEDRRRFDVAMKKIGLETARSGIAHTMEEALAVAADVG-FPCIIRPSFTMGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEFE IC  GL  S T ++L+++SL+GWKEYE+EV+RD  DN +I+CSIEN D MG
Sbjct: 182  AYNREEFEEICARGLDLSPTKELLIDESLIGWKEYEMEVVRDKNDNCIIVCSIENFDAMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            +HTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGVE GGSNVQFAVNP +G ++VIEMN
Sbjct: 242  IHTGDSITVAPAQTLTDKEYQIMRNASMAVLREIGVETGGSNVQFAVNPKNGRLIVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT  +TPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGYTLDELMNDITGGRTPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            F FEKF G+   LTTQMKSVGE MA+GRT QES QKALR LE G +G+      +     
Sbjct: 362  FNFEKFAGANDRLTTQMKSVGEVMAIGRTQQESLQKALRGLEVGATGFDPKVSLDDPEAL 421

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
             +++  L+    +R+  I  A + G+ VD +  L+ ID+WFL Q +EL+ +E+ +    +
Sbjct: 422  TKIRRELKDAGAERIWYIADAFRAGLSVDGVFNLTNIDRWFLVQIEELVRLEEKVAEVGI 481

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
            + +  D   ++KR+GF+D ++A      E E+R+ R    + P YKRVDTCAAEF  +T 
Sbjct: 482  TGLNADFLRQLKRKGFADARLAKLAGVHEAEIRKLRDQYDLHPVYKRVDTCAAEFATDTA 541

Query: 627  YMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSN 686
            YMYS+Y+ ECES P+ ++K+++LGGGPNRIGQGIEFDYCC H S +L+  GYETIM+N N
Sbjct: 542  YMYSTYEEECESNPSDREKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVNCN 601

Query: 687  PETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHR 746
            PETVSTDYDTSDRLYFEP+T+EDVL ++ +E+P+G+IVQ+GGQTPLKL+          R
Sbjct: 602  PETVSTDYDTSDRLYFEPVTLEDVLEIVRIEKPKGVIVQYGGQTPLKLA----------R 651

Query: 747  LPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEIG 806
               A+G   V + GTSPD+ID AEDRERF   ++ L ++QP      +   A+  AKEIG
Sbjct: 652  ALEAAG---VPVIGTSPDAIDRAEDRERFQHAVERLKLKQPANATVTAIEMAVEKAKEIG 708

Query: 807  YPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALAD 866
            YP+VVRPSYVLGGRAMEIVY +  L  Y + AV V  + PVL+D +L DA+E+DVDA+ D
Sbjct: 709  YPLVVRPSYVLGGRAMEIVYDEADLRRYFQTAVSVSNDAPVLLDHFLDDAVEVDVDAICD 768

Query: 867  SCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNC 926
                V+IGGIMEHIEQAGVHSGDSAC +P  T+S    D +     KLA  L V GLMN 
Sbjct: 769  G-EMVLIGGIMEHIEQAGVHSGDSACSLPAYTLSQEIQDVMRQQVQKLAFELQVRGLMNV 827

Query: 927  QYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPKH 986
            Q+A+  + +VYL+E NPRA+RTVPFVSKA G PLAK AA VM+GKSL + G TKEVIP +
Sbjct: 828  QFAVKNN-EVYLIEVNPRAARTVPFVSKATGVPLAKVAARVMAGKSLAEQGVTKEVIPPY 886

Query: 987  VSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVFL 1046
             SVKE VLPF KF G D LLGPEMRSTGEVMG+  +F  AFAKAQ+ +   +   G   L
Sbjct: 887  YSVKEVVLPFNKFPGVDPLLGPEMRSTGEVMGVGRTFAEAFAKAQLGSNSTMKKHGRALL 946

Query: 1047 SLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVAN 1106
            S+ +  K  +  +A   L  GF++ +T GTA  L   GI    V K+HEGRPH  D + N
Sbjct: 947  SVREGDKERVVDLAAKLLKQGFELDATHGTAIVLGEAGINPRLVNKVHEGRPHIQDRIKN 1006

Query: 1107 GQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRS 1156
            G+   ++ T+SG    + D   +RR  L YKV   TT++G  A A A+ +
Sbjct: 1007 GEYTYIINTTSGRRAIE-DSRVIRRSALQYKVHYDTTLNGGFATAMALNA 1055


>gi|121608130|ref|YP_995937.1| carbamoyl-phosphate synthase large subunit [Verminephrobacter
            eiseniae EF01-2]
 gi|121552770|gb|ABM56919.1| carbamoyl-phosphate synthase large subunit [Verminephrobacter
            eiseniae EF01-2]
          Length = 1089

 Score = 1230 bits (3183), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 636/1082 (58%), Positives = 803/1082 (74%), Gaps = 32/1082 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTDL  ILI+GAGPI+IGQACEFDYSG QACKAL+EEGY VILINSNPATIMTDP  AD
Sbjct: 4    KRTDLESILIIGAGPIIIGQACEFDYSGVQACKALREEGYRVILINSNPATIMTDPATAD 63

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+T + +E+++ KERPDA+LPTMGGQTALN A+ L  +G L+KY VELIGA  +A
Sbjct: 64   VTYIEPITWQTIEKIIAKERPDAILPTMGGQTALNCALDLWHNGVLDKYRVELIGATPEA 123

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  FK AM  IG+ +  SGI +++++  ++  ++G FP +IRP+FTLGGTGGGI
Sbjct: 124  IDKAEDRLKFKDAMTRIGLGSARSGIAHSMEQAWAVQKDLG-FPAVIRPSFTLGGTGGGI 182

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN EEFE ICK GL AS T+++L+E+SLLGWKEYE+EV+RD ADN +IICSIEN+DPMG
Sbjct: 183  AYNPEEFETICKRGLQASPTNELLIEESLLGWKEYEMEVVRDKADNCIIICSIENLDPMG 242

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGV+ GG+NVQFAVNP DG ++VIEMN
Sbjct: 243  VHTGDSITVAPAQTLTDKEYQIMRNASLAVLREIGVDTGGANVQFAVNPEDGRMIVIEMN 302

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+L ++ NDIT   TPASFEPSIDYVVTKIPR
Sbjct: 303  PRVSRSSALASKATGFPIAKVAAKLAVGYTLAELRNDITGGATPASFEPSIDYVVTKIPR 362

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            FAFEKFP ++  LTTQMKSVGE MA+GR+FQESFQKALR LE G  G     + E   D 
Sbjct: 363  FAFEKFPTADSRLTTQMKSVGEVMAMGRSFQESFQKALRGLEVGVDG-----MNEKTQDR 417

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVE----QFLL 562
            E L+  L  P P+R+  +  A   G+ VDE+H L+ IDKWFL Q +E++ +E    Q  +
Sbjct: 418  EVLEKELGEPGPERIWYVGDAFAMGLSVDEVHGLTRIDKWFLAQIEEIVKIELELDQLTI 477

Query: 563  TQS---VSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAA 619
             Q    ++ +T      +K++GFSD+++A   K+ EK VR+ R +L V P YKRVDTCAA
Sbjct: 478  EQGDAALAALTAGTLRALKQKGFSDRRLAKLLKTGEKAVRQARHALNVRPVYKRVDTCAA 537

Query: 620  EFEANTPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYE 679
            EF  NT Y+YS+Y+ ECE+ P+QKKK+++LGGGPNRIGQGIEFDYCC H + +L+  G+E
Sbjct: 538  EFATNTAYLYSTYENECEAEPSQKKKIMVLGGGPNRIGQGIEFDYCCVHAALALREDGFE 597

Query: 680  TIMMNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIH 739
            TIM+N NPETVSTDYD SDRLYFEPLT+ED+L ++D E+P+G+IVQ+GGQTPLKL+L + 
Sbjct: 598  TIMVNCNPETVSTDYDISDRLYFEPLTLEDMLEIVDKEKPDGVIVQYGGQTPLKLALGL- 656

Query: 740  QYLDEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADAL 799
                     +A G   V I GTSPD IDAAEDRERF  ++ +L + QP    A++EA AL
Sbjct: 657  ---------AAEG---VPIIGTSPDMIDAAEDRERFQKLLGDLGLRQPPNATARTEAQAL 704

Query: 800  AIAKEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEI 859
              A  +GYP+VVRPSYVLGGRAMEIV+    L  Y+  AV+V  + PVL+D++L+DAIE 
Sbjct: 705  EKAASLGYPLVVRPSYVLGGRAMEIVHEQRDLERYMREAVKVSNDSPVLLDRFLNDAIEC 764

Query: 860  DVDALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLN 919
            DVD L D  G   IGG+MEHIEQAGVHSGDSAC +P   +S + +D +   +  +AK LN
Sbjct: 765  DVDCLRDLQGQTFIGGVMEHIEQAGVHSGDSACSLPPYYLSGATVDELKRQSAAMAKGLN 824

Query: 920  VCGLMNCQYAIT-TSGD--VYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDL 976
            V GLMN Q+AI   +G   +Y+LE NPRASRTVPFVSKA G PLAK AA  M+G+SL   
Sbjct: 825  VVGLMNVQFAIQEVNGQDVIYVLEVNPRASRTVPFVSKATGIPLAKVAARCMAGQSLAAQ 884

Query: 977  GFTKEVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQ 1036
            G T+EV P + SVKEAV PF KF G D +LGPEM+STGEVMG+  +F  AF K+Q+ AG 
Sbjct: 885  GITREVTPPYFSVKEAVFPFVKFPGVDTILGPEMKSTGEVMGVGKTFGAAFVKSQLGAGT 944

Query: 1037 KLPLSGTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEG 1096
            KLP +G VFL++ +  KP    IA   + +GF++++T GTA  +E  G+ V+ V K+ EG
Sbjct: 945  KLPTAGKVFLTVKNSDKPRAVDIAGQLVALGFELLATKGTAAAIEAAGVPVKVVHKVTEG 1004

Query: 1097 RPHAGDMVANGQIQMMVITSSGDSLDQI-DGLKLRRRGLAYKVPVITTVSGALANAEAIR 1155
            RPH  DM+ + QI ++VI +  +  + I D   +R   L  +V   TT+ GA A  E ++
Sbjct: 1005 RPHIVDMIKDNQI-VLVINTVEERRNAIADSRAIRTSSLLARVTTFTTIFGAEAAVEGMQ 1063

Query: 1156 SL 1157
             L
Sbjct: 1064 HL 1065


>gi|432856844|ref|ZP_20084095.1| carbamoyl-phosphate synthase large chain [Escherichia coli KTE144]
 gi|431395352|gb|ELG78864.1| carbamoyl-phosphate synthase large chain [Escherichia coli KTE144]
          Length = 1072

 Score = 1230 bits (3183), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 618/1070 (57%), Positives = 781/1070 (72%), Gaps = 18/1070 (1%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILILGAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  E+V +++EKERPDA+LPTMGGQTALN A+ L   G LE++GV +IGA  DA
Sbjct: 63   ATYIEPIHWEVVRKIIEKERPDAVLPTMGGQTALNCALELERQGVLEEFGVTMIGATADA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  F  AMK IG++T  SGI +T++E +++A ++G FP IIRP+FT+GG+GGGI
Sbjct: 123  IDKAEDRRRFDVAMKKIGLETARSGIAHTMEEALAVAADVG-FPCIIRPSFTMGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEFE IC  GL  S T ++L+++SL+GWKEYE+EV+RD  DN +I+CSIEN D MG
Sbjct: 182  AYNREEFEEICARGLDLSPTKELLIDESLIGWKEYEMEVVRDKNDNCIIVCSIENFDAMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            +HTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGVE GGSNVQFAVNP +G ++VIEMN
Sbjct: 242  IHTGDSITVAPAQTLTDKEYQIMRNASMAVLREIGVETGGSNVQFAVNPKNGRLIVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT  +TPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGYTLDELMNDITGGRTPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            F FEKF G+   LTTQMKSVGE MA+GRT QES QKALR LE G +G+      +     
Sbjct: 362  FNFEKFAGANDRLTTQMKSVGEVMAIGRTQQESLQKALRGLEVGATGFDPKVSLDDPEAL 421

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
             +++  L+    +R+  I  A + G+ VD +  L+ ID+WFL Q +EL+ +E+ +    +
Sbjct: 422  TKIRRELKDAGAERIWYIADAFRAGLSVDGVFNLTNIDRWFLVQIEELVRLEEKVAEVGI 481

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
            + +  D   ++KR+GF+D ++A      E E+R+ R    + P YKRVDTCAAEF  +T 
Sbjct: 482  TGLNADFLRQLKRKGFADARLAKLAGVREAEIRKLRDQYDLHPVYKRVDTCAAEFATDTA 541

Query: 627  YMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSN 686
            YMYS+Y+ ECES P+ ++K+++LGGGPNRIGQGIEFDYCC H S +L+  GYETIM+N N
Sbjct: 542  YMYSTYEEECESNPSDREKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVNCN 601

Query: 687  PETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHR 746
            PETVSTDYDTSDRLYFEP+T+EDVL ++ +E+P+G+IVQ+GGQTPLKL+          R
Sbjct: 602  PETVSTDYDTSDRLYFEPVTLEDVLEIVRIEKPKGVIVQYGGQTPLKLA----------R 651

Query: 747  LPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEIG 806
               A+G   V + GTSPD+ID AEDRERF   +  L ++QP      +   A+  AKEIG
Sbjct: 652  ALEAAG---VPVIGTSPDAIDRAEDRERFQHAVDRLKLKQPANATVTAIEMAVEKAKEIG 708

Query: 807  YPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALAD 866
            YP+VVRPSYVLGGRAMEIVY +  L  Y + AV V  + PVL+D +L DA+E+DVDA+ D
Sbjct: 709  YPLVVRPSYVLGGRAMEIVYDEADLRRYFQTAVSVSNDAPVLLDHFLDDAVEVDVDAICD 768

Query: 867  SCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNC 926
                V+IGGIMEHIEQAGVHSGDSAC +P  T+S    D +     KLA  L V GLMN 
Sbjct: 769  G-EMVLIGGIMEHIEQAGVHSGDSACSLPAYTLSQEIQDVMRQQVQKLAFELQVRGLMNV 827

Query: 927  QYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPKH 986
            Q+A+  + +VYL+E NPRA+RTVPFVSKA G PLAK AA VM+GKSL + G TKEVIP +
Sbjct: 828  QFAVKNN-EVYLIEVNPRAARTVPFVSKATGVPLAKVAARVMAGKSLAEQGVTKEVIPPY 886

Query: 987  VSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVFL 1046
             SVKE VLPF KF G D LLGPEMRSTGEVMG+  +F  AFAKAQ+ +   +   G   L
Sbjct: 887  YSVKEVVLPFNKFPGVDPLLGPEMRSTGEVMGVGRTFAEAFAKAQLGSNSTMKKHGRALL 946

Query: 1047 SLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVAN 1106
            S+ +  K  +  +A   L  GF++ +T GTA  L   GI    V K+HEGRPH  D + N
Sbjct: 947  SVREGDKERVVDLAAKLLKQGFELDATHGTAIVLGEAGINPRLVNKVHEGRPHIQDRIKN 1006

Query: 1107 GQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRS 1156
            G+   ++ T+SG    + D   +RR  L YKV   TT++G  A A A+ +
Sbjct: 1007 GEYTYIINTTSGRRAIE-DSRVIRRSALQYKVHYDTTLNGGFATAMALNA 1055


>gi|398811721|ref|ZP_10570510.1| carbamoyl-phosphate synthase, large subunit [Variovorax sp. CF313]
 gi|398079811|gb|EJL70649.1| carbamoyl-phosphate synthase, large subunit [Variovorax sp. CF313]
          Length = 1082

 Score = 1230 bits (3183), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 631/1078 (58%), Positives = 795/1078 (73%), Gaps = 30/1078 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTDL+ ILI+GAGPI+IGQACEFDYSG QACKAL+EEGY+VILINSNPATIMTDP  AD
Sbjct: 3    KRTDLKSILIIGAGPIIIGQACEFDYSGVQACKALREEGYKVILINSNPATIMTDPATAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYG-------VEL 200
             TYI P+T + VE+++ KERPDA+LPTMGGQTALN A+ L  +G L+KY        VEL
Sbjct: 63   VTYIEPITWQTVEKIIAKERPDAILPTMGGQTALNCALDLWRNGVLDKYTGAATNKPVEL 122

Query: 201  IGAKLDAIKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTL 260
            IGA  +AI KAEDR  FK AM  IG+ +  SGI +T+DE  ++   +G FP +IRP+FTL
Sbjct: 123  IGATPEAIDKAEDRLKFKDAMTKIGLGSARSGIAHTMDEAWAVQKTLG-FPTVIRPSFTL 181

Query: 261  GGTGGGIAYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSI 320
            GGTGGGIAYN +EFE ICK G+ AS T+++L+E+SLLGWKEYE+EV+RD ADN +I+CSI
Sbjct: 182  GGTGGGIAYNPDEFETICKRGIEASPTNELLIEESLLGWKEYEMEVVRDKADNCIIVCSI 241

Query: 321  ENVDPMGVHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGE 380
            EN+DPMGVHTGDSITVAPAQTL+DKEYQ LR+ S+A++REIGV+ GGSNVQF++NP DG 
Sbjct: 242  ENLDPMGVHTGDSITVAPAQTLSDKEYQILRNASLAVLREIGVDTGGSNVQFSINPKDGR 301

Query: 381  VMVIEMNPRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITK-KTPASFEPSIDY 439
            ++VIEMNPRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ N+IT   TPASFEPSIDY
Sbjct: 302  MVVIEMNPRVSRSSALASKATGFPIAKVAAKLAVGYTLDELRNEITGGATPASFEPSIDY 361

Query: 440  VVTKIPRFAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNV 499
            VVTKIPRFAFEKFP ++  LTTQMKSVGE MA+GRTFQESFQKALR LE G  G     +
Sbjct: 362  VVTKIPRFAFEKFPQADSRLTTQMKSVGEVMAMGRTFQESFQKALRGLEVGVDG-----L 416

Query: 500  KELDWDWEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQ 559
             E   D E L+  L  P P+R+  +  A   G+ VDE+  L+ ID WFL Q +E++ +E 
Sbjct: 417  NEKTQDREVLEKELGEPGPERIWYVGDAFAMGLSVDEVFALTKIDPWFLVQIEEIVKIEL 476

Query: 560  FLLTQSVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAA 619
             L T+S+  + KD    +K++GFSD+++A   K+T+  +REKR +LGV P YKRVDTCAA
Sbjct: 477  ELETKSLDQIDKDTLLALKKKGFSDRRLAKQLKTTDTAIREKRRALGVRPVYKRVDTCAA 536

Query: 620  EFEANTPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYE 679
            EF  NT YMYS+Y+ ECE+ PT KKK+++LGGGPNRIGQGIEFDYCC H + +++  GYE
Sbjct: 537  EFATNTAYMYSTYEDECEADPTDKKKIMVLGGGPNRIGQGIEFDYCCVHAALAMREDGYE 596

Query: 680  TIMMNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIH 739
            TIM+N NPETVSTDYDTSDRLYFEPLT+EDVL ++D E+P G+IVQ+GGQTPLKL+L + 
Sbjct: 597  TIMVNCNPETVSTDYDTSDRLYFEPLTLEDVLEIVDREKPLGVIVQYGGQTPLKLALDLE 656

Query: 740  QYLDEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADAL 799
                      A+G   V I GTSPD IDAAEDRERF  ++ EL + QP    A++E +AL
Sbjct: 657  ----------ANG---VPIIGTSPDMIDAAEDRERFQKLLHELGLRQPPNATARTEPEAL 703

Query: 800  AIAKEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEI 859
              A  +GYP+VVRPSYVLGGRAMEIV+    L  Y+  AV+V  + PVL+D++L+DA+E 
Sbjct: 704  EKAAALGYPLVVRPSYVLGGRAMEIVHEQRDLERYMREAVKVSNDSPVLLDRFLNDAVEC 763

Query: 860  DVDALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLN 919
            DVD + D+ G  +IGG+MEHIEQAGVHSGDSAC +P  ++S+  +  +   +  +AK LN
Sbjct: 764  DVDCIRDAEGATLIGGVMEHIEQAGVHSGDSACSLPPYSLSAETIAELKRQSAAMAKALN 823

Query: 920  VCGLMNCQYAITTSGD---VYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDL 976
            V GLMN Q+AI        +Y+LE NPRASRTVP+VSKA G  LAK AA  M+G+SL   
Sbjct: 824  VVGLMNVQFAIQQKDGKDVIYVLEVNPRASRTVPYVSKATGIQLAKVAARCMAGQSLKSQ 883

Query: 977  GFTKEVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQ 1036
            G TKEV P + SVKEAV PF KF G D +LGPEM+STGEVMG+  +F  AF K+Q+ AG 
Sbjct: 884  GVTKEVTPPYFSVKEAVFPFVKFPGVDTILGPEMKSTGEVMGVGKTFGEAFVKSQLGAGT 943

Query: 1037 KLPLSGTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEG 1096
             LP SG VF+S+ +  K     +A+  + +GF+I++T GTA  +   GI    V K+ EG
Sbjct: 944  HLPKSGKVFISVKNNDKARAVEVARGLVKLGFEIIATKGTAAAIGAAGIECATVNKVTEG 1003

Query: 1097 RPHAGDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAI 1154
            RPH  DM+ N +I +++ T         D  ++R   L  +V   TT+ GA A  E +
Sbjct: 1004 RPHIVDMIKNNEIALVINTVEERRNAITDSRQIRTSALLARVTTFTTIFGAEAAVEGM 1061


>gi|423202127|ref|ZP_17188706.1| carbamoyl-phosphate synthase large chain [Aeromonas veronii AER39]
 gi|404615279|gb|EKB12251.1| carbamoyl-phosphate synthase large chain [Aeromonas veronii AER39]
          Length = 1074

 Score = 1230 bits (3183), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 612/1068 (57%), Positives = 780/1068 (73%), Gaps = 18/1068 (1%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KR DL+ ILILGAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRNDLQSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+T E+V ++++KERPDA+LPTMGGQTALN A+AL + G L ++GVE+IGA  DA
Sbjct: 63   ATYIEPITWEVVREIIKKERPDAILPTMGGQTALNCALALEKHGVLAEFGVEMIGATADA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  F +AM++IG++ P +GI + ++E   +   +G FP IIRP+FT+GG+GGGI
Sbjct: 123  IDKAEDRSRFDKAMRSIGLECPRAGIAHNMEEAWGVQQMVG-FPCIIRPSFTMGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN EEF  IC+ GL  S T ++L+++SL+GWKEYE+EV+RD  DN +I+C+IEN DPMG
Sbjct: 182  AYNTEEFVEICERGLDLSPTKELLIDESLIGWKEYEMEVVRDRNDNCIIVCAIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            +HTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGVE GGSNVQF +NP DG +++IEMN
Sbjct: 242  IHTGDSITVAPAQTLTDKEYQLMRNASMAVLREIGVETGGSNVQFGINPKDGRMVIIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL++GY+LD++ NDIT  +TPASFEP+IDYVVTK+PR
Sbjct: 302  PRVSRSSALASKATGFPIAKIAAKLAIGYTLDELMNDITGGRTPASFEPAIDYVVTKVPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            F FEKF G+   LTTQMKSVGE MA+GR FQES  KALRSLE G +G+            
Sbjct: 362  FNFEKFAGANDRLTTQMKSVGEVMAIGRNFQESLHKALRSLETGKTGFDPMVDLNAPDSL 421

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
             ++++ L+    DR+  I  A + G+ +D I +L+ ID WFL Q ++L+ +E+ +  + +
Sbjct: 422  TRIRHELQDAGSDRIFYIADAFRAGLSMDGIFKLTKIDPWFLVQIEDLVKLEEEVKERGM 481

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
            + +  D    +KR+GF+D ++A      E EVR+ R    + P YKRVDTCAAEF  NT 
Sbjct: 482  AGLDADFLRALKRKGFADARLAKILGVAEGEVRKLRARHNIFPVYKRVDTCAAEFATNTA 541

Query: 627  YMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSN 686
            YMYSSYD ECE+AP+ + K++I+GGGPNRIGQGIEFDYCC H + +L+  GYETIM+N N
Sbjct: 542  YMYSSYDEECEAAPSNRDKIMIIGGGPNRIGQGIEFDYCCVHAALALREDGYETIMVNCN 601

Query: 687  PETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHR 746
            PETVSTDYDTSDRLYFEP+T+EDVL ++ +E+P+G+IVQ+GGQTPLKL+          R
Sbjct: 602  PETVSTDYDTSDRLYFEPVTLEDVLEIVRIEKPKGVIVQYGGQTPLKLA----------R 651

Query: 747  LPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEIG 806
               A+G   V I GTSPD+ID AEDRERF + ++ L ++QP+ G   +   A+ +A+ I 
Sbjct: 652  ALEANG---VPIIGTSPDAIDRAEDRERFQSAVERLGLKQPENGTVTALEQAVLLAERIT 708

Query: 807  YPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALAD 866
            YP+VVRPSYVLGGRAMEIVY ++ L  Y   AV V  E PVL+D++L DA E+DVDA+ D
Sbjct: 709  YPLVVRPSYVLGGRAMEIVYDEQDLRRYFAEAVSVSNESPVLLDRFLDDATELDVDAICD 768

Query: 867  SCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNC 926
               +VVIGGIMEHIEQAG+HSGDS C +P  T+S    D I     KLA  L V GLMN 
Sbjct: 769  GT-DVVIGGIMEHIEQAGIHSGDSGCSLPPYTLSKKIQDEIREQVRKLALELGVIGLMNV 827

Query: 927  QYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPKH 986
            Q+A+    D+YL+E NPRA+RTVPFVSKA G PLAK AA VM+G+SL + GFTKE+IP +
Sbjct: 828  QFAV-KGDDIYLIEVNPRAARTVPFVSKATGAPLAKIAARVMAGQSLQEQGFTKEIIPPY 886

Query: 987  VSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVFL 1046
             SVKE VLPF KF G D LLGPEMRSTGEVMG+  SF  A+AKAQ+ A   +P  G   L
Sbjct: 887  YSVKEVVLPFAKFPGVDPLLGPEMRSTGEVMGVGSSFAEAYAKAQLGANHAVPKEGRALL 946

Query: 1047 SLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVAN 1106
            S+    K  +  +A   L++G+++ +T GTA  L    I    V K+HEGRPH  D + N
Sbjct: 947  SVRHSDKAQVVDLAAKLLELGYELDATHGTAVALGEASINPRLVNKVHEGRPHILDRIKN 1006

Query: 1107 GQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAI 1154
            G+   +V T+ G    Q D  +LRR  L  KV   TT++ A A   AI
Sbjct: 1007 GEYTYIVNTAEGRVAIQ-DSKQLRRAALQNKVAYTTTMNEAFATCMAI 1053


>gi|398348167|ref|ZP_10532870.1| carbamoyl phosphate synthase large subunit [Leptospira broomii str.
            5399]
          Length = 1101

 Score = 1230 bits (3183), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 635/1119 (56%), Positives = 797/1119 (71%), Gaps = 58/1119 (5%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KR D+R +LILG+GPIVIGQACEFDYSGTQA KALKE+G  VIL+NSNPATIMTDP LAD
Sbjct: 3    KREDIRSVLILGSGPIVIGQACEFDYSGTQAAKALKEKGIRVILLNSNPATIMTDPDLAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TY+ PMT  +V+++LEKE+PDA+LPT+GGQTALNLA+A   +G LEKY VELIGAK+DA
Sbjct: 63   ATYVEPMTVSVVQKILEKEKPDAILPTVGGQTALNLAIACHNAGILEKYKVELIGAKVDA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            IKKAEDR+LFK AM+ IGV  P SG+ N L E   I   IG  PLI+RPAFTLGGTGGGI
Sbjct: 123  IKKAEDRELFKIAMEKIGVSVPRSGLVNNLKEAFEIKARIG-LPLIVRPAFTLGGTGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AY++E FE +   GL AS  SQVL+E+S+LGWKE+ELEVMRDLADNVVIICSIEN+DPMG
Sbjct: 182  AYDEETFEEVVGKGLKASPISQVLLEESVLGWKEFELEVMRDLADNVVIICSIENIDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAP QTL+D EYQ LRD SI IIREIGVE GGSN+QFAVNP +G+V+VIEMN
Sbjct: 242  VHTGDSITVAPQQTLSDTEYQNLRDMSIKIIREIGVETGGSNIQFAVNPANGDVIVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRF 447
            PRVSRSSALASKATGFPIAK+AA LS+GY+LD+I NDIT+ TPASFEPSIDYVVTKIPRF
Sbjct: 302  PRVSRSSALASKATGFPIAKIAALLSIGYTLDEIKNDITRVTPASFEPSIDYVVTKIPRF 361

Query: 448  AFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCS-NVKEL---- 502
            AFEKFPG++  L  QMK+VGEAMA+GRTF+ESFQKA+RSLE    G+G   N  EL    
Sbjct: 362  AFEKFPGTDDTLGVQMKAVGEAMAIGRTFKESFQKAIRSLETDRYGFGSDGNFAELIEFH 421

Query: 503  ----DWDWEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVE 558
                    E++   LR PN  R+  +  A+++G  V+ IHEL  ID WFL QF++L   E
Sbjct: 422  SLSSAAKQEKIDAFLRRPNDKRIFYLKKALEEGYSVERIHELCKIDPWFLYQFEDLQIAE 481

Query: 559  QFLLTQSVSNMTKDDFYEVKRRGFSDKQIAFATK-------------------------S 593
            +  L +  S +TK     +KR GFS++Q+A+  K                          
Sbjct: 482  KEFLEKGYSILTK-----MKRLGFSNRQLAYLKKKNEINSILGSSITPDKKKGEISALLK 536

Query: 594  TEKEVREKRLSLGVI-PSYKRVDTCAAEFEANTPYMYSSYDFECESAPTQKKKVLILGGG 652
            +E+ + E+ L+   I P YKR+DTCA EFEA TPY YSSYD E E+  T KK V+ILGGG
Sbjct: 537  SEEVILERSLTSSKIEPVYKRIDTCAGEFEAYTPYFYSSYDQEDETEVTDKKSVIILGGG 596

Query: 653  PNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSNPETVSTDYDTSDRLYFEPLTVEDVLN 712
            PNRIGQGIEFDYCCCH SF+LQ  G E+IM+NSNPETVSTDYDTSDRLYFEPLT+EDV +
Sbjct: 597  PNRIGQGIEFDYCCCHASFALQDLGVESIMVNSNPETVSTDYDTSDRLYFEPLTLEDVTH 656

Query: 713  VIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHRLPSASGDGLVRIWGTSPDSIDAAEDR 772
            +   E+P G+I+QFGGQTPLKL+    + L+   +P         I GTSPDSID AEDR
Sbjct: 657  IYKKEKPIGVIIQFGGQTPLKLA----KDLERKGIP---------ILGTSPDSIDRAEDR 703

Query: 773  ERFNAIIKELSIEQPKGGIAKSEADALAIAKEIGYPVVVRPSYVLGGRAMEIVYTDETLV 832
            +RF  ++ +L +  PK GIA S  +A  IAK I YP++VRPSYVLGGRAM I+  +  L 
Sbjct: 704  KRFAEVLDKLKLVSPKNGIATSMEEARKIAKSITYPILVRPSYVLGGRAMLIISEERELD 763

Query: 833  TYLENAVEVDPERPVLIDKYLSDAIEIDVDALADSCGNVVIGGIMEHIEQAGVHSGDSAC 892
             Y+E A E+  +RP+LID +L DA+E+DVDAL D    V I GIMEHIE+AG+HSGDSAC
Sbjct: 764  RYMEKAEEISEDRPLLIDSFLEDAVEVDVDALCDG-KEVFIAGIMEHIEEAGIHSGDSAC 822

Query: 893  MIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNCQYAITTSGDVYLLEANPRASRTVPFV 952
            ++P +++S   ++ I   T  LA  L V GL+N Q+A+     +Y++E NPRASRTVPFV
Sbjct: 823  ILPPQSLSVHVMEEIRKSTRALALELQVKGLINIQFAVKDE-QLYVIEVNPRASRTVPFV 881

Query: 953  SKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRS 1012
            SKA+GH + KYA  +M G+SL+ L   KE+    V+VKEAVLPF KF G D +LGPEMRS
Sbjct: 882  SKALGHAIVKYATRIMMGESLSSLPLPKEMSFPMVNVKEAVLPFNKFPGVDTILGPEMRS 941

Query: 1013 TGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVFLSLNDLTKPHLERIAKAFLDIGFKIVS 1072
            TGEVMGI  +   AF K+Q  AG++LP  GTVF+S+ND  K  L +  K   ++GF +++
Sbjct: 942  TGEVMGIAETAGEAFLKSQYMAGEELPSQGTVFVSVNDKDKKELLKYIKELSNLGFNLIA 1001

Query: 1073 TSGTAHFLELKGIAVERVLKMHEGR-PHAGDMVANGQIQMMVITSSGDSLDQIDGLKLRR 1131
            T GT  +L   G+   ++ K+++ + P A D +   +I  +++ +    + + D   +R+
Sbjct: 1002 TEGTHKYLSDNGVLSSKINKVYDNQFPTALDYIRENKIH-LILNTPLSRVTRDDSFAIRQ 1060

Query: 1132 RGLAYKVPVITTVSGALANAEAIRSLKSNTVTMTALQDF 1170
              + YK+P +TT S A A    +  ++    T+ +LQ  
Sbjct: 1061 AAIRYKIPCLTTASAAKALIRGMVEMRDKGFTIRSLQSL 1099


>gi|331661399|ref|ZP_08362323.1| carbamoyl-phosphate synthase, large subunit [Escherichia coli TA143]
 gi|422333194|ref|ZP_16414205.1| carbamoyl-phosphate synthase large chain [Escherichia coli 4_1_47FAA]
 gi|331061314|gb|EGI33277.1| carbamoyl-phosphate synthase, large subunit [Escherichia coli TA143]
 gi|373245709|gb|EHP65174.1| carbamoyl-phosphate synthase large chain [Escherichia coli 4_1_47FAA]
          Length = 1072

 Score = 1230 bits (3183), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 618/1070 (57%), Positives = 782/1070 (73%), Gaps = 18/1070 (1%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILILGAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  E+V +++EKERPDA+LPTMGGQTALN A+ L   G LE++GV +IGA  DA
Sbjct: 63   ATYIEPIHWEVVRKIIEKERPDAVLPTMGGQTALNCALELERQGVLEEFGVTMIGATADA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  F  AMK IG++T  SGI +T++E +++A ++G FP IIRP+FT+GG+GGGI
Sbjct: 123  IDKAEDRRRFDVAMKKIGLETARSGIAHTMEEALAVAADVG-FPCIIRPSFTMGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEFE IC  GL  S T ++L+++SL+GWKEYE+EV+RD  DN +I+CSIEN D MG
Sbjct: 182  AYNREEFEEICARGLDLSPTKELLIDESLIGWKEYEMEVVRDKNDNCIIVCSIENFDAMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            +HTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGVE GGSNVQFAVNP +G ++VIEMN
Sbjct: 242  IHTGDSITVAPAQTLTDKEYQIMRNASMAVLREIGVETGGSNVQFAVNPKNGRLIVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT  +TPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGYTLDELMNDITGGRTPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            F FEKF G+   LTTQMKSVGE MA+GRT QES QKALR LE G +G+      +     
Sbjct: 362  FNFEKFAGANDRLTTQMKSVGEVMAIGRTQQESLQKALRGLEVGATGFDPKVSLDDPEAL 421

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
             +++  L+    +R+  I  A + G+ VD +  L+ ID+WFL Q +EL+ +E+ +    +
Sbjct: 422  TKIRRELKDAGAERIWYIADAFRAGLSVDGVFNLTNIDRWFLVQIEELVRLEEKVAEVGI 481

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
            + +  D   ++KR+GF+D ++A      E E+R+ R    + P YKRVDTCAAEF  +T 
Sbjct: 482  TGLNADFLRQLKRKGFADARLAKLAGVREAEIRKLRDQYDLHPVYKRVDTCAAEFATDTA 541

Query: 627  YMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSN 686
            YMYS+Y+ ECES P+ ++K+++LGGGPNRIGQGIEFDYCC H S +L+  GYETIM+N N
Sbjct: 542  YMYSTYEEECESNPSDREKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVNCN 601

Query: 687  PETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHR 746
            PETVSTDYDTSDRLYFEP+T+EDVL ++ +E+P+G+IVQ+GGQTPLKL+          R
Sbjct: 602  PETVSTDYDTSDRLYFEPVTLEDVLEIVRIEKPKGVIVQYGGQTPLKLA----------R 651

Query: 747  LPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEIG 806
               A+G   V + GTSPD+ID AEDRERF   ++ L ++QP      +   A+  AKEIG
Sbjct: 652  ALEAAG---VPVIGTSPDAIDRAEDRERFQHAVERLKLKQPANATVTTIEMAVEKAKEIG 708

Query: 807  YPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALAD 866
            YP+VVRPSYVLGGRAMEIVY +  L  Y + AV V  + PVL+D +L DA+E+DVDA+ D
Sbjct: 709  YPLVVRPSYVLGGRAMEIVYDEADLRRYFQTAVSVSNDAPVLLDHFLDDAVEVDVDAICD 768

Query: 867  SCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNC 926
                V+IGGIMEHIEQAGVHSGDSAC +P  T+S    D +     KLA  L V GLMN 
Sbjct: 769  G-EMVLIGGIMEHIEQAGVHSGDSACSLPAYTLSQEIQDVMRQQVQKLAFELQVRGLMNV 827

Query: 927  QYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPKH 986
            Q+A+  + +VYL+E NPRA+RTVPFVSKA G PLAK AA VM+GKSL + G TKEVIP +
Sbjct: 828  QFAVKNN-EVYLIEVNPRAARTVPFVSKATGVPLAKVAARVMAGKSLAEQGVTKEVIPPY 886

Query: 987  VSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVFL 1046
             SVKE VLPF KF G D LLGPEMRSTGEVMG+  +F  AFAKAQ+ +   +   G   L
Sbjct: 887  YSVKEVVLPFNKFPGVDPLLGPEMRSTGEVMGVGRTFAEAFAKAQLGSNSTMKKHGRALL 946

Query: 1047 SLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVAN 1106
            S+ +  K  +  +A   L  GF++ +T GTA  L   GI    V K+HEGRPH  D + N
Sbjct: 947  SVREGDKERVVDLAAKLLKQGFELDATHGTAIVLGEAGINPRLVNKVHEGRPHIQDRIKN 1006

Query: 1107 GQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRS 1156
            G+   ++ T+SG    + D   +RR  L YKV   TT++G  A A A+ +
Sbjct: 1007 GEYTYIINTTSGRRAIE-DSRVIRRSALQYKVHYDTTLNGGFATAMALNA 1055


>gi|432546350|ref|ZP_19783162.1| carbamoyl-phosphate synthase large chain [Escherichia coli KTE236]
 gi|432546755|ref|ZP_19783555.1| carbamoyl-phosphate synthase large chain [Escherichia coli KTE237]
 gi|432624999|ref|ZP_19860998.1| carbamoyl-phosphate synthase large chain [Escherichia coli KTE76]
 gi|431068132|gb|ELD76637.1| carbamoyl-phosphate synthase large chain [Escherichia coli KTE236]
 gi|431086567|gb|ELD92589.1| carbamoyl-phosphate synthase large chain [Escherichia coli KTE237]
 gi|431153065|gb|ELE53984.1| carbamoyl-phosphate synthase large chain [Escherichia coli KTE76]
          Length = 1072

 Score = 1230 bits (3183), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 618/1076 (57%), Positives = 785/1076 (72%), Gaps = 18/1076 (1%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILILGAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  E+V +++EKERPDA+LPTMGGQTALN A+ L   G LE++GV +IGA  DA
Sbjct: 63   ATYIEPIHWEVVRKIIEKERPDAVLPTMGGQTALNCALELERQGVLEEFGVTMIGATADA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  F  AMK IG++T  SGI +T++E +++A ++G FP IIRP+FT+GG+GGGI
Sbjct: 123  IDKAEDRRRFDVAMKKIGLETARSGIAHTMEEALAVAADVG-FPCIIRPSFTMGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEFE IC  GL  S T ++L+++SL+GWKEYE+EV+RD  DN +I+CSIEN D MG
Sbjct: 182  AYNREEFEEICARGLDLSPTKELLIDESLIGWKEYEMEVVRDKNDNCIIVCSIENFDAMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            +HTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGVE GGSNVQFAVNP +G ++VIEMN
Sbjct: 242  IHTGDSITVAPAQTLTDKEYQIMRNASMAVLREIGVETGGSNVQFAVNPKNGRLIVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT  +TPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGYTLDELMNDITGGRTPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            F FEKF G+   LTTQMKSVGE MA+GRT QES QKALR LE G +G+      +     
Sbjct: 362  FNFEKFAGANDRLTTQMKSVGEVMAIGRTQQESLQKALRGLEVGATGFDPKVSLDDPEAL 421

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
             +++  L+    +R+  I  A + G+ VD +  L+ ID+WFL Q +EL+ +E+ +    +
Sbjct: 422  TKIRRELKDAGAERIWYIADAFRAGLSVDGVFNLTNIDRWFLVQIEELVRLEEKVAEVGI 481

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
            + +  D   ++KR+GF+D ++A      E E+R+ R    + P YKRVDTCAAEF  +T 
Sbjct: 482  TGLNADFLRQLKRKGFADARLAKLAGVREAEIRKLRDQYDLHPVYKRVDTCAAEFATDTA 541

Query: 627  YMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSN 686
            YMYS+Y+ ECES P+ ++K+++LGGGPNRIGQGIEFDYCC H S +L+  GYETIM+N N
Sbjct: 542  YMYSTYEEECESNPSDREKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVNCN 601

Query: 687  PETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHR 746
            PETVSTDYDTSDRLYFEP+T+EDVL ++ +E+P+G+IVQ+GGQTPLKL+          R
Sbjct: 602  PETVSTDYDTSDRLYFEPVTLEDVLEIVRIEKPKGVIVQYGGQTPLKLA----------R 651

Query: 747  LPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEIG 806
               A+G   V + GTSPD+ID AEDRERF   ++ L ++QP      +   A+  AKEIG
Sbjct: 652  ALEAAG---VPVIGTSPDAIDRAEDRERFQHAVERLKLKQPANATVTTIEMAVEKAKEIG 708

Query: 807  YPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALAD 866
            YP+VVRPSYVLGGRAMEIVY +  L  Y + AV V  + PVL+D +L DA+E+DVDA+ D
Sbjct: 709  YPLVVRPSYVLGGRAMEIVYDEADLRRYFQTAVSVSNDAPVLLDHFLDDAVEVDVDAICD 768

Query: 867  SCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNC 926
                V+IGGIMEHIEQAGVHSGDSAC +P  T+S    D +     KLA  L V GLMN 
Sbjct: 769  G-EMVLIGGIMEHIEQAGVHSGDSACSLPAYTLSQEIQDVMRQQVQKLAFELQVRGLMNV 827

Query: 927  QYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPKH 986
            Q+A+  + +VYL+E NPRA+RTVPFVSKA G PLAK AA VM+GK+L + G TKEVIP +
Sbjct: 828  QFAVKNN-EVYLIEVNPRAARTVPFVSKATGVPLAKVAARVMAGKTLAEQGVTKEVIPPY 886

Query: 987  VSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVFL 1046
             SVKE VLPF KF G D LLGPEMRSTGEVMG+  +F  AFAKAQ+ +   +   G   L
Sbjct: 887  YSVKEVVLPFNKFPGVDPLLGPEMRSTGEVMGVGRTFAEAFAKAQLGSNSTMKKHGRALL 946

Query: 1047 SLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVAN 1106
            S+ +  K  +  +A   L  GF++ +T GTA  L   GI    V K+HEGRPH  D + N
Sbjct: 947  SVREGDKERVVDLAAKLLKQGFELDATHGTAIVLGEAGINPRLVNKVHEGRPHIQDRIKN 1006

Query: 1107 GQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTV 1162
            G+   ++ T+SG    + D   +RR  L YKV   TT++G  A A A+ +  ++ V
Sbjct: 1007 GEYTYIINTTSGRRAIE-DSRVIRRSALQYKVHYDTTLNGGFATAMALNADATDKV 1061


>gi|451975646|ref|ZP_21926830.1| carbamoyl-phosphate synthase large subunit [Vibrio alginolyticus
            E0666]
 gi|451930389|gb|EMD78099.1| carbamoyl-phosphate synthase large subunit [Vibrio alginolyticus
            E0666]
          Length = 1077

 Score = 1230 bits (3183), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 614/1063 (57%), Positives = 777/1063 (73%), Gaps = 18/1063 (1%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILILGAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIQSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  E+V +++EKERPDA+LPTMGGQTALN A+ L + G LE++GVE+IGA  DA
Sbjct: 63   ATYIEPIQWEVVRKIIEKERPDAVLPTMGGQTALNCALDLEKHGVLEEFGVEMIGATADA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  F +AMK+IG++ P +    +++E   + + +G FP IIRP+FT+GGTGGGI
Sbjct: 123  IDKAEDRSRFDKAMKSIGLECPRADTAKSMEEAYKVLDMVG-FPCIIRPSFTMGGTGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYNKEEFE IC+ GL  S T+++L+++SL+GWKEYE+EV+RD ADN +I+CSIEN DPMG
Sbjct: 182  AYNKEEFEEICRRGLDLSPTNELLIDESLIGWKEYEMEVVRDKADNCIIVCSIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            +HTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGVE GGSNVQF +NP DG +++IEMN
Sbjct: 242  IHTGDSITVAPAQTLTDKEYQLMRNASLAVLREIGVETGGSNVQFGINPKDGRMVIIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VG++LD++ NDIT   TPASFEP+IDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKIAAKLAVGFTLDELQNDITGGATPASFEPTIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            F FEKF G+   LTTQMKSVGE MA+GR  QES  KALR LE G +G+      E     
Sbjct: 362  FNFEKFAGANDRLTTQMKSVGEVMAIGRNQQESLHKALRGLEVGATGFDEMVDLEAPDAL 421

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
             ++++ L+    +R+  I  A + GM VD +  L+ ID+WFL Q +E++ +E+ +     
Sbjct: 422  TKIRHELKEAGAERIWYIADAFRAGMSVDGVFNLTQIDRWFLVQIEEIVKLEEQVKAGGY 481

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
            + +TK+   ++KR+GFSD +++      E E+R  R    + P YKRVDTCAAEF ++T 
Sbjct: 482  AGLTKEVLRQMKRKGFSDARLSKLLGVAESEIRRAREQFDIHPVYKRVDTCAAEFSSDTA 541

Query: 627  YMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSN 686
            YMYSSYD ECE+ PT K K+++LGGGPNRIGQGIEFDYCC H S +L+  GYETIM+N N
Sbjct: 542  YMYSSYDEECEANPTDKDKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVNCN 601

Query: 687  PETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHR 746
            PETVSTDYDTSDRLYFEP+T+EDVL++  +E+P+G+IVQ+GGQTPLKL+          R
Sbjct: 602  PETVSTDYDTSDRLYFEPVTLEDVLSIARVEKPKGVIVQYGGQTPLKLA----------R 651

Query: 747  LPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEIG 806
               A+G   V I GTSPD+ID AEDRERF A +  L + QP+     +   A+  +KEIG
Sbjct: 652  ALEAAG---VPIIGTSPDAIDRAEDRERFQAAVDRLGLLQPENATVTTMEQAVEKSKEIG 708

Query: 807  YPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALAD 866
            +P+VVRPSYVLGGRAMEIVY ++ L  Y   AV V  E PVL+D++L DA E+D+DA+ D
Sbjct: 709  FPLVVRPSYVLGGRAMEIVYDEQDLRRYFNEAVSVSNESPVLLDRFLDDATEVDIDAICD 768

Query: 867  SCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNC 926
                VVIGGIMEHIEQAGVHSGDSAC +P  T+S    D +     KLA  L V GLMN 
Sbjct: 769  G-ERVVIGGIMEHIEQAGVHSGDSACSLPAYTLSQEIQDKMREQVEKLAFELGVRGLMNT 827

Query: 927  QYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPKH 986
            Q+A+  + DVYL+E NPRA+RTVPFVSKA G PLAK AA VM+G+SL   GFTKE+IP +
Sbjct: 828  QFAVKDN-DVYLIEVNPRAARTVPFVSKATGAPLAKIAARVMAGQSLESQGFTKEIIPPY 886

Query: 987  VSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVFL 1046
             SVKE VLPF KF G D LLGPEMRSTGEVMG+  +F  A+AKA++  G   P  G   L
Sbjct: 887  YSVKEVVLPFNKFPGVDPLLGPEMRSTGEVMGVGATFAEAYAKAELGCGAVYPEGGRALL 946

Query: 1047 SLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVAN 1106
            S+ +  K  +  +A   + +G+++ +T GTA  L   GI    V K+HEGRPH  D + N
Sbjct: 947  SVREGDKERVVDLASKLVKLGYQLDATHGTAVILGEAGINPRLVNKVHEGRPHILDRIKN 1006

Query: 1107 GQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALA 1149
             +   +V T++G    + D   LRR  LA KV   TT++ A A
Sbjct: 1007 NEYTYIVNTAAGRQAIE-DSKVLRRGALAEKVNYTTTLNAAFA 1048



 Score =  256 bits (653), Expect = 7e-65,   Method: Compositional matrix adjust.
 Identities = 163/429 (37%), Positives = 246/429 (57%), Gaps = 26/429 (6%)

Query: 67  KIDS-SAELSNGAA---SSKDQKL-GKRTDLRKILILGAGPIVIGQACEFDYSGTQACKA 121
           ++D+ +AE S+  A   SS D++     TD  KI++LG GP  IGQ  EFDY    A  A
Sbjct: 528 RVDTCAAEFSSDTAYMYSSYDEECEANPTDKDKIMVLGGGPNRIGQGIEFDYCCVHASLA 587

Query: 122 LKEEGYEVILINSNPATIMTDPGLADRTYITPMTPELVEQVLEKERPDALLPTMGGQTAL 181
           L+E+GYE I++N NP T+ TD   +DR Y  P+T E V  +   E+P  ++   GGQT L
Sbjct: 588 LREDGYETIMVNCNPETVSTDYDTSDRLYFEPVTLEDVLSIARVEKPKGVIVQYGGQTPL 647

Query: 182 NLAVALAESGALEKYGVELIGAKLDAIKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECI 241
            LA       ALE  GV +IG   DAI +AEDR+ F+ A+  +G+  P +    T+++ +
Sbjct: 648 KLA------RALEAAGVPIIGTSPDAIDRAEDRERFQAAVDRLGLLQPENATVTTMEQAV 701

Query: 242 SIANEIGEFPLIIRPAFTLGGTGGGIAYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKE 301
             + EIG FPL++RP++ LGG    I Y++++        ++ S  S VL+++ L    E
Sbjct: 702 EKSKEIG-FPLVVRPSYVLGGRAMEIVYDEQDLRRYFNEAVSVSNESPVLLDRFLDDATE 760

Query: 302 YELEVMRDLADNVVIICSIENVDPMGVHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREI 361
            +++ + D  + VVI   +E+++  GVH+GDS    PA TL+ +   ++R+    +  E+
Sbjct: 761 VDIDAICD-GERVVIGGIMEHIEQAGVHSGDSACSLPAYTLSQEIQDKMREQVEKLAFEL 819

Query: 362 GVECGGSNVQFAVNPVDGEVMVIEMNPRVSRSSALASKATGFPIAKMAAKLSVGYSLDQI 421
           GV  G  N QFAV   D +V +IE+NPR +R+    SKATG P+AK+AA++  G SL+  
Sbjct: 820 GVR-GLMNTQFAVK--DNDVYLIEVNPRAARTVPFVSKATGAPLAKIAARVMAGQSLES- 875

Query: 422 PNDITKKTPASFEPSIDYVVTKIPRFAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQ 481
               TK+    +     Y V ++    F KFPG +PLL  +M+S GE M +G TF E++ 
Sbjct: 876 -QGFTKEIIPPY-----YSVKEVV-LPFNKFPGVDPLLGPEMRSTGEVMGVGATFAEAYA 928

Query: 482 KALRSLECG 490
           KA   L CG
Sbjct: 929 KA--ELGCG 935


>gi|430741227|ref|YP_007200356.1| carbamoyl-phosphate synthase large subunit [Singulisphaera acidiphila
            DSM 18658]
 gi|430012947|gb|AGA24661.1| carbamoyl-phosphate synthase, large subunit [Singulisphaera
            acidiphila DSM 18658]
          Length = 1077

 Score = 1230 bits (3182), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 619/1089 (56%), Positives = 789/1089 (72%), Gaps = 22/1089 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTDL+ ILI+GAGPIVIGQACEFDYSGTQACKAL+EEGY V+L+NSNPATIMTDP +AD
Sbjct: 3    KRTDLKTILIIGAGPIVIGQACEFDYSGTQACKALREEGYRVVLVNSNPATIMTDPDMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
            RTY+ P+TPE VE+++  ERPDA+LPT+GGQT LN+A+AL +SGAL +Y  +LIGA  +A
Sbjct: 63   RTYVEPITPEFVERIIAAERPDAVLPTLGGQTGLNVALALHDSGALARYDCKLIGATAEA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I+KAEDR LFK  M+ IG+++  SG+ + LDE   I +E+G  P ++RP+FT+GG+GGG+
Sbjct: 123  IRKAEDRQLFKVCMEQIGLESARSGLAHNLDEARGIRDELG-LPCVLRPSFTMGGSGGGV 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN++EF+ +    L  S    VL+E+SL+GWKEYE+EVMRD ADN VIICSIEN+DP+G
Sbjct: 182  AYNRDEFDRMVAYALELSPVHSVLIEESLVGWKEYEMEVMRDEADNAVIICSIENLDPLG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDS+TVAPAQTLTDKEYQR+RD S+AI+REIGVE GGSNVQFA+NP  G ++VIEMN
Sbjct: 242  VHTGDSVTVAPAQTLTDKEYQRMRDASLAILREIGVETGGSNVQFAINPDTGRMVVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRF 447
            PRVSRSSALASKATGFPIAK+AAKL+VGY LD++ NDIT +T A FEPSIDYVVTK+PR+
Sbjct: 302  PRVSRSSALASKATGFPIAKIAAKLAVGYRLDELRNDITGQTCACFEPSIDYVVTKVPRW 361

Query: 448  AFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWD-- 505
            AFEKFP +   LTTQMKSVGE MA+GRTF+ES QKALR LE G  G G         +  
Sbjct: 362  AFEKFPEASTELTTQMKSVGEVMAIGRTFRESLQKALRGLEVGRFGLGADPKDRWGTEDQ 421

Query: 506  --WEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLT 563
               E+++  L  PNP+R+  +  AM  GM +D IHEL+ ID+WFL    EL++ E  L  
Sbjct: 422  PGEEEIQGKLATPNPERLWFLRYAMLAGMSIDRIHELTAIDRWFLVNIAELVETEATLRQ 481

Query: 564  Q-SVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFE 622
              S+    +      KR GFSD+Q+A    S+E EVR +R  LGV   YK VDTCAAEFE
Sbjct: 482  AGSLERAGESLLRLAKRDGFSDRQLAHLWGSSEAEVRRERKRLGVEAVYKLVDTCAAEFE 541

Query: 623  ANTPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIM 682
            A TPY YS+Y+   E+  + K +V++LGGGPNRIGQGIEFDYCCC  +F+L+  GYE +M
Sbjct: 542  ATTPYYYSTYESTDEARVSDKPRVVVLGGGPNRIGQGIEFDYCCCQAAFALRRDGYEVVM 601

Query: 683  MNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYL 742
            +NSNPETVSTDYDTSD L+FEPLT EDVLNV +  +P G+IVQFGGQTPL L+       
Sbjct: 602  VNSNPETVSTDYDTSDSLFFEPLTAEDVLNVCERVKPVGVIVQFGGQTPLNLA------- 654

Query: 743  DEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIA 802
               R   A+G   V I GT+P+SI+ AEDRERF+A+I+ L + QP    A    +A  IA
Sbjct: 655  ---RALEAAG---VPILGTTPESIELAEDRERFHAVIERLGLRQPPSATALKYEEARRIA 708

Query: 803  KEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVD 862
            + IGYPVVVRPS+VLGGR MEIVY +  L  Y+  AVE     P+LIDK+L DA E+DVD
Sbjct: 709  ERIGYPVVVRPSFVLGGRGMEIVYDESALARYMTEAVEASAGHPILIDKFLEDAQEVDVD 768

Query: 863  ALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCG 922
            A++D     ++ G+MEHIE+AG+HSGDSAC IP  ++S++ +  +   T  LA  + V G
Sbjct: 769  AVSDG-ERTIVAGVMEHIEEAGIHSGDSACAIPPFSLSAAVVTELKRQTRLLADAIRVRG 827

Query: 923  LMNCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEV 982
            LMN Q+A+   G+VY+LE NPRASRTVPFVSKA G  LA+ AA VM+G++L + G   + 
Sbjct: 828  LMNIQFAV-KDGEVYVLEVNPRASRTVPFVSKATGLELARAAARVMAGRTLAEQGIVSDP 886

Query: 983  IPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSG 1042
             P +VSVKE+V PF KF G D++LGPEMRSTGEVMGI   F  AFAKAQ+AA   LP SG
Sbjct: 887  EPSYVSVKESVFPFAKFAGVDIVLGPEMRSTGEVMGIAPDFAGAFAKAQLAASISLPESG 946

Query: 1043 TVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGD 1102
            TVF+S+    +  +  +A    ++G+ ++ST+GTA  L   GIAV  V K+ EGRP+  D
Sbjct: 947  TVFVSVAARDRQAVLPVAARLSELGYDLMSTAGTAAALTEAGIAVSVVRKIREGRPNLLD 1006

Query: 1103 MVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTV 1162
             +ANG I ++V T SG      +G ++R   +++ VP ITT++G  A   A+  ++   +
Sbjct: 1007 HLANGSIALIVNTPSGKGARTDEG-RIRASAVSHGVPCITTIAGGKAAVAALERMRQGPL 1065

Query: 1163 TMTALQDFF 1171
             + ALQD  
Sbjct: 1066 EVYALQDLL 1074


>gi|410614573|ref|ZP_11325616.1| carbamoyl-phosphate synthase large subunit [Glaciecola psychrophila
            170]
 gi|410165897|dbj|GAC39505.1| carbamoyl-phosphate synthase large subunit [Glaciecola psychrophila
            170]
          Length = 1072

 Score = 1230 bits (3182), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 621/1081 (57%), Positives = 787/1081 (72%), Gaps = 26/1081 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILILGAGPIVIGQACEFDYSG QACKAL+EEG+ VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGFRVILVNSNPATIMTDPEMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  E+V++++EKERPDA+LPTMGGQTALN A+ L + G L ++GVE+IGA  DA
Sbjct: 63   ATYIEPIHWEVVKKIIEKERPDAILPTMGGQTALNCALDLNKHGVLAEFGVEMIGATADA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR+ F +AMK+IG++ P + I +TL+E   ++  IG FP IIRP+FT+GG+GGGI
Sbjct: 123  IDKAEDRERFDKAMKSIGLECPYAEIAHTLEEAFDVSTRIG-FPCIIRPSFTMGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYNK+EFE IC+ GL  S TS++L+++SL+GWKEYE+EV+RD ADNV+I+C+IEN+DPMG
Sbjct: 182  AYNKQEFEEICRRGLDLSPTSELLIDESLIGWKEYEMEVVRDSADNVIIVCTIENIDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKE+Q +R+ +IA++REIGVE GGSNVQF V+P  G ++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEFQIMRNAAIAVLREIGVETGGSNVQFGVDPKTGRLVVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKK-TPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL++GY+LD++ NDIT   TPASFEP+IDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAIGYTLDELANDITGGLTPASFEPTIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            F FEKF G+   LTTQMKSVGE MA+GR  QES QKALR LE G +G        +D   
Sbjct: 362  FNFEKFAGANDRLTTQMKSVGEVMAIGRNLQESLQKALRGLEVGVNGLDSI----IDITT 417

Query: 507  EQLKYS----LRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLL 562
             + K +    LR P  +R+  I  AM+ GM VDEI EL+ ID+W+L Q +ELI +EQ + 
Sbjct: 418  PEAKTTIVRELREPGAERIWYIADAMRMGMSVDEIFELTNIDRWYLVQIEELIILEQQVQ 477

Query: 563  TQSVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFE 622
               +S++ +D    +KR+GF+D +IA  T   E +VRE R    + P YKRVDTCAAEF 
Sbjct: 478  ASGLSSIDEDLMKILKRKGFADSRIADLTGVDETDVREMRRGFDIHPVYKRVDTCAAEFS 537

Query: 623  ANTPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIM 682
            ++T YMYS+YD ECE+ PT   K+++LGGGPNRIGQGIEFDYCC H + +L+  GYETIM
Sbjct: 538  SDTAYMYSTYDEECEANPTDNDKIMVLGGGPNRIGQGIEFDYCCVHAALALREDGYETIM 597

Query: 683  MNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYL 742
            +N NPETVSTDYDTSDRLYFE +T+EDVL ++ +E+P+G+IVQ+GGQTPLKL+       
Sbjct: 598  VNCNPETVSTDYDTSDRLYFESVTLEDVLEIVRIEKPKGVIVQYGGQTPLKLA------- 650

Query: 743  DEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIA 802
               R   A+G   V I GTSPD+ID AEDRERF  ++ +L+++QP     ++   AL  A
Sbjct: 651  ---RELEAAG---VPIIGTSPDAIDKAEDRERFQKMVNKLNLKQPANATVRNLEQALVAA 704

Query: 803  KEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVD 862
             +IG+P+VVRPSYVLGGRAMEIVY    L  YL +AV+V  + PVL+D++L DAIE+DVD
Sbjct: 705  DKIGFPLVVRPSYVLGGRAMEIVYDINDLKRYLNDAVKVSNDSPVLLDRFLDDAIEVDVD 764

Query: 863  ALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCG 922
            A+ D   +VVIGGIMEHIEQAGVHSGDSAC +P  ++S    D +      +A  L V G
Sbjct: 765  AICDGT-DVVIGGIMEHIEQAGVHSGDSACSLPPYSLSPEVQDVMRQQVKAMALELGVIG 823

Query: 923  LMNCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEV 982
            LMN Q+A+   G VYL+E NPRA+RTVPFVSKA G PLAK  A  M G+SL   G TKE+
Sbjct: 824  LMNTQFAV-KDGQVYLIEVNPRAARTVPFVSKATGMPLAKIGARAMVGQSLVSQGITKEI 882

Query: 983  IPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSG 1042
            IP   SVKE VLPF KFQG D LLGPEMRSTGEVMG+  SF  A+AKA + A Q +P+ G
Sbjct: 883  IPPFYSVKEVVLPFAKFQGVDPLLGPEMRSTGEVMGVGESFEEAYAKANLGASQPIPVGG 942

Query: 1043 TVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGD 1102
               LS+    K  +  + +A +  GF + +T GTA  L   G+    V K+ EGRP+  D
Sbjct: 943  KALLSVRLNDKNRVIELGQAMVSKGFTLEATKGTATVLNNAGVECSIVNKLSEGRPNIVD 1002

Query: 1103 MVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTV 1162
             + NG+   +V T+ G      D + +R+  L  KV   TT++ A A   A ++     V
Sbjct: 1003 AIKNGEYCYIVNTTEGRQAIN-DSVYIRKEALLNKVAYTTTMNAAFATVNANKADDRARV 1061

Query: 1163 T 1163
            T
Sbjct: 1062 T 1062


>gi|406677688|ref|ZP_11084868.1| carbamoyl-phosphate synthase large chain [Aeromonas veronii AMC35]
 gi|404623495|gb|EKB20345.1| carbamoyl-phosphate synthase large chain [Aeromonas veronii AMC35]
          Length = 1074

 Score = 1230 bits (3182), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 612/1068 (57%), Positives = 780/1068 (73%), Gaps = 18/1068 (1%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KR DL+ ILILGAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRNDLQSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+T E+V ++++KERPDA+LPTMGGQTALN A+AL + G L ++GVE+IGA  DA
Sbjct: 63   ATYIEPITWEVVREIIKKERPDAILPTMGGQTALNCALALEKHGVLAEFGVEMIGATADA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  F +AM++IG++ P +GI + ++E   +   +G FP IIRP+FT+GG+GGGI
Sbjct: 123  IDKAEDRSRFDKAMRSIGLECPRAGIAHNMEEAWGVQQMVG-FPCIIRPSFTMGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN EEF  IC+ GL  S T ++L+++SL+GWKEYE+EV+RD  DN +I+C+IEN DPMG
Sbjct: 182  AYNTEEFVEICERGLDLSPTKELLIDESLIGWKEYEMEVVRDRNDNCIIVCAIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            +HTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGVE GGSNVQF +NP DG +++IEMN
Sbjct: 242  IHTGDSITVAPAQTLTDKEYQLMRNASMAVLREIGVETGGSNVQFGINPKDGRMVIIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL++GY+LD++ NDIT  +TPASFEP+IDYVVTK+PR
Sbjct: 302  PRVSRSSALASKATGFPIAKIAAKLAIGYTLDELMNDITGGRTPASFEPAIDYVVTKVPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            F FEKF G+   LTTQMKSVGE MA+GR FQES  KALRSLE G +G+            
Sbjct: 362  FNFEKFAGANDRLTTQMKSVGEVMAIGRNFQESLHKALRSLETGKTGFDPMVDLNAPDSL 421

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
             ++++ L+    DR+  I  A + G+ +D I +L+ ID WFL Q ++L+ +E+ +  + +
Sbjct: 422  TRIRHELQDAGSDRIFYIADAFRAGLSMDGIFKLTKIDPWFLVQIEDLVKLEEEVKERGM 481

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
            + +  D    +KR+GF+D ++A      E EVR+ R    + P YKRVDTCAAEF  NT 
Sbjct: 482  AGLDADFLRALKRKGFADARLAKILGVAEGEVRKLRARHNIFPVYKRVDTCAAEFATNTA 541

Query: 627  YMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSN 686
            YMYSSYD ECE+AP+ + K++I+GGGPNRIGQGIEFDYCC H + +L+  GYETIM+N N
Sbjct: 542  YMYSSYDEECEAAPSNRDKIMIIGGGPNRIGQGIEFDYCCVHAALALREDGYETIMVNCN 601

Query: 687  PETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHR 746
            PETVSTDYDTSDRLYFEP+T+EDVL ++ +E+P+G+IVQ+GGQTPLKL+          R
Sbjct: 602  PETVSTDYDTSDRLYFEPVTLEDVLEIVRIEKPKGVIVQYGGQTPLKLA----------R 651

Query: 747  LPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEIG 806
               A+G   V I GTSPD+ID AEDRERF + ++ L ++QP+ G   +   A+ +A+ I 
Sbjct: 652  ALEANG---VPIIGTSPDAIDRAEDRERFQSAVERLGLKQPENGTVTALEQAVLLAERIT 708

Query: 807  YPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALAD 866
            YP+VVRPSYVLGGRAMEIVY ++ L  Y   AV V  E PVL+D++L DA E+DVDA+ D
Sbjct: 709  YPLVVRPSYVLGGRAMEIVYDEQDLRRYFAEAVSVSNESPVLLDRFLDDATELDVDAICD 768

Query: 867  SCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNC 926
               +VVIGGIMEHIEQAG+HSGDS C +P  T+S    D I     KLA  L V GLMN 
Sbjct: 769  GT-DVVIGGIMEHIEQAGIHSGDSGCSLPPYTLSRKIQDEIREQVRKLALELGVIGLMNV 827

Query: 927  QYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPKH 986
            Q+A+    D+YL+E NPRA+RTVPFVSKA G PLAK AA VM+G+SL + GFTKE+IP +
Sbjct: 828  QFAV-KGDDIYLIEVNPRAARTVPFVSKATGAPLAKIAARVMAGQSLQEQGFTKEIIPPY 886

Query: 987  VSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVFL 1046
             SVKE VLPF KF G D LLGPEMRSTGEVMG+  SF  A+AKAQ+ A   +P  G   L
Sbjct: 887  YSVKEVVLPFAKFPGVDPLLGPEMRSTGEVMGVGSSFAEAYAKAQLGANHAVPKEGRALL 946

Query: 1047 SLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVAN 1106
            S+    K  +  +A   L++G+++ +T GTA  L    I    V K+HEGRPH  D + N
Sbjct: 947  SVRHSDKAQVVDLAAKLLELGYELDATHGTAVALGEASINPRLVNKVHEGRPHILDRIKN 1006

Query: 1107 GQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAI 1154
            G+   +V T+ G    Q D  +LRR  L  KV   TT++ A A   AI
Sbjct: 1007 GEYTYIVNTAEGRVAIQ-DSKQLRRAALQNKVAYTTTMNEAFATCMAI 1053


>gi|386333237|ref|YP_006029406.1| carbamoyl-phosphate synthase large chain (carbamoyl-phosphate
            synthetase ammonia chain) protein [Ralstonia solanacearum
            Po82]
 gi|334195685|gb|AEG68870.1| carbamoyl-phosphate synthase large chain (carbamoyl-phosphate
            synthetase ammonia chain) protein [Ralstonia solanacearum
            Po82]
          Length = 1081

 Score = 1230 bits (3182), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 618/1085 (56%), Positives = 804/1085 (74%), Gaps = 32/1085 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILI+GAGPI+IGQACEFDYSG QACKAL+EEG++V+L+NSNPATIMTDP  AD
Sbjct: 3    KRTDIKTILIIGAGPIIIGQACEFDYSGAQACKALREEGFKVVLVNSNPATIMTDPSTAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+T E+VE+++ KERPDA+LPTMGGQTALN A+ L   G L+KY VELIGA  +A
Sbjct: 63   VTYIEPITWEVVERIIAKERPDAILPTMGGQTALNCALDLHRHGVLQKYNVELIGASPEA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGE------FPLIIRPAFTLG 261
            I KAEDR  FK AM  IG+ +  SGI ++L+E +++  +I        +P++IRP+FTLG
Sbjct: 123  IDKAEDRQKFKDAMTKIGLGSAKSGIAHSLEEALAVQAQIARETGTSGYPIVIRPSFTLG 182

Query: 262  GTGGGIAYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIE 321
            GTGGGIAYN+EEFE ICK GL  S T+++L+E+SLLGWKEYE+EV+RD  DN +I+CSIE
Sbjct: 183  GTGGGIAYNREEFEDICKRGLDLSPTNELLIEESLLGWKEYEMEVVRDKKDNCIIVCSIE 242

Query: 322  NVDPMGVHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEV 381
            N+DPMG+HTGDSITVAPAQTLTDKEYQ LR+ S+A++REIGV+ GGSNVQF++NP DG +
Sbjct: 243  NLDPMGIHTGDSITVAPAQTLTDKEYQILRNASLAVLREIGVDTGGSNVQFSINPQDGRM 302

Query: 382  MVIEMNPRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYV 440
            +VIEMNPRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ N+IT   TPASFEPSIDYV
Sbjct: 303  IVIEMNPRVSRSSALASKATGFPIAKVAAKLAVGYTLDELKNEITGGATPASFEPSIDYV 362

Query: 441  VTKIPRFAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVK 500
            VTK+PRFAFEKFP ++  LTTQMKSVGE MA+GRTFQESFQKALR LE G  G     + 
Sbjct: 363  VTKVPRFAFEKFPQADSHLTTQMKSVGEVMAMGRTFQESFQKALRGLEVGVDG-----LD 417

Query: 501  ELDWDWEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQF 560
            E   D +++   +    PDR+  +  A + G+ +DE++  + +D WFL Q ++++  E  
Sbjct: 418  EKSTDRDEIIEEIGEAGPDRIWYLGDAFRLGLSIDEVYAETAVDPWFLAQIEDIVKTEAL 477

Query: 561  LLTQSVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAE 620
            +  +++ +++  +   +K++GFSD+++A   K+  + VREKR++  V P YKRVDTCAAE
Sbjct: 478  VKARTLESLSAAELRLLKQKGFSDRRLAKLMKTEARAVREKRIAEKVRPVYKRVDTCAAE 537

Query: 621  FEANTPYMYSSYDF---ECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAG 677
            F  NT Y+YS+Y+    ECE+ PT +KK+++LGGGPNRIGQGIEFDYCC H + +L+  G
Sbjct: 538  FATNTAYLYSTYEAEHGECEAEPTDRKKIMVLGGGPNRIGQGIEFDYCCVHAALALREDG 597

Query: 678  YETIMMNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLP 737
            YETIM+N NPETVSTDYDTSDRLYFEP+T+EDVL ++D E+P G+IVQ+GGQTPLKL+L 
Sbjct: 598  YETIMVNCNPETVSTDYDTSDRLYFEPVTLEDVLEIVDKEKPVGVIVQYGGQTPLKLALD 657

Query: 738  IHQYLDEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEAD 797
            +           A+G   V I GT+PD IDAAEDRERF  ++ EL + QP    A++E +
Sbjct: 658  LE----------ANG---VPIIGTTPDMIDAAEDRERFQKLLHELGLRQPPNRTARAEDE 704

Query: 798  ALAIAKEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAI 857
            AL +A+EIGYP+VVRPSYVLGGRAMEIV+    L  Y+  AV+V  + PVL+D++L+DAI
Sbjct: 705  ALKLAEEIGYPLVVRPSYVLGGRAMEIVHEPRDLERYMREAVKVSNDSPVLLDRFLNDAI 764

Query: 858  EIDVDALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKR 917
            E DVD L+D    V IGG+MEHIEQAGVHSGDSAC +P  ++S + +D +   T  +AK 
Sbjct: 765  ECDVDCLSDG-KRVFIGGVMEHIEQAGVHSGDSACSLPPYSLSQATVDELKRQTAAMAKA 823

Query: 918  LNVCGLMNCQYAITTSGD---VYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLN 974
            LNV GLMN Q+AI   G    VY+LE NPRASRTVP+VSKA G  LAK AA  M+G+SL+
Sbjct: 824  LNVVGLMNVQFAIQQKGGEDIVYVLEVNPRASRTVPYVSKATGISLAKVAARCMAGQSLD 883

Query: 975  DLGFTKEVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAA 1034
            + G   EV+P + SVKEAV PF KF G D +LGPEMRSTGEVMG+  +F  A  K+Q+AA
Sbjct: 884  EQGINHEVVPSYYSVKEAVFPFNKFPGVDPVLGPEMRSTGEVMGVGRTFGEALFKSQLAA 943

Query: 1035 GQKLPLSGTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMH 1094
            G +LP  GTV +++ D  KP    +A+    +G+ IV+T GTA  +E  GI V  V K+ 
Sbjct: 944  GSRLPEKGTVLMTVKDSDKPRAIEVARTLHTLGYPIVATRGTASAIEAAGIPVRVVNKVK 1003

Query: 1095 EGRPHAGDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAI 1154
            +GRPH  DM+ NG++ ++  T         D   +R   LA +V   TT++GA A  E +
Sbjct: 1004 DGRPHIVDMIKNGELALVFTTVDETRAAIADSRSIRTAALANRVTYYTTIAGARAAVEGL 1063

Query: 1155 RSLKS 1159
            + L++
Sbjct: 1064 KHLQN 1068


>gi|330829113|ref|YP_004392065.1| carbamoyl-phosphate synthase, large subunit [Aeromonas veronii B565]
 gi|423210195|ref|ZP_17196749.1| carbamoyl-phosphate synthase large chain [Aeromonas veronii AER397]
 gi|328804249|gb|AEB49448.1| Carbamoyl-phosphate synthase, large subunit [Aeromonas veronii B565]
 gi|404616083|gb|EKB13041.1| carbamoyl-phosphate synthase large chain [Aeromonas veronii AER397]
          Length = 1074

 Score = 1230 bits (3182), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 611/1068 (57%), Positives = 780/1068 (73%), Gaps = 18/1068 (1%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KR DL+ ILILGAGPIVIGQACEFDYSG QACKAL+EEGY V+L+NSNPATIMTDP +AD
Sbjct: 3    KRNDLQSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVVLVNSNPATIMTDPEMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+T E+V ++++KERPDA+LPTMGGQTALN A+AL + G L ++GVE+IGA  DA
Sbjct: 63   ATYIEPITWEVVREIIKKERPDAILPTMGGQTALNCALALEKHGVLAEFGVEMIGATADA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  F +AM++IG++ P +GI + ++E   +   +G FP IIRP+FT+GG+GGGI
Sbjct: 123  IDKAEDRSRFDKAMRSIGLECPRAGIAHNMEEAWGVQQMVG-FPCIIRPSFTMGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN EEF  IC+ GL  S T ++L+++SL+GWKEYE+EV+RD  DN +I+C+IEN DPMG
Sbjct: 182  AYNTEEFVEICERGLDLSPTKELLIDESLIGWKEYEMEVVRDRNDNCIIVCAIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            +HTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGVE GGSNVQF +NP DG +++IEMN
Sbjct: 242  IHTGDSITVAPAQTLTDKEYQLMRNASMAVLREIGVETGGSNVQFGINPKDGRMVIIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL++GY+LD++ NDIT  +TPASFEP+IDYVVTK+PR
Sbjct: 302  PRVSRSSALASKATGFPIAKIAAKLAIGYTLDELMNDITGGRTPASFEPAIDYVVTKVPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            F FEKF G+   LTTQMKSVGE MA+GR FQES  KALRSLE G +G+            
Sbjct: 362  FNFEKFAGANDRLTTQMKSVGEVMAIGRNFQESLHKALRSLETGKTGFDPMVDLNAPDSL 421

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
             ++++ L+    DR+  I  A + G+ +D I +L+ ID WFL Q ++L+ +E+ +  + +
Sbjct: 422  TRIRHELQDAGSDRIFYIADAFRAGLSMDGIFKLTKIDPWFLVQIEDLVKLEEEVKERGM 481

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
            + +  D    +KR+GF+D ++A      E EVR+ R    + P YKRVDTCAAEF  NT 
Sbjct: 482  AGLDADFLRALKRKGFADARLAKILGVAEGEVRKLRARHNIFPVYKRVDTCAAEFATNTA 541

Query: 627  YMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSN 686
            YMYSSYD ECE+AP+ + K++I+GGGPNRIGQGIEFDYCC H + +L+  GYETIM+N N
Sbjct: 542  YMYSSYDEECEAAPSNRDKIMIIGGGPNRIGQGIEFDYCCVHAALALREDGYETIMVNCN 601

Query: 687  PETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHR 746
            PETVSTDYDTSDRLYFEP+T+EDVL ++ +E+P+G+IVQ+GGQTPLKL+          R
Sbjct: 602  PETVSTDYDTSDRLYFEPVTLEDVLEIVRIEKPKGVIVQYGGQTPLKLA----------R 651

Query: 747  LPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEIG 806
               A+G   V I GTSPD+ID AEDRERF + ++ L ++QP+ G   +   A+ +A+ I 
Sbjct: 652  ALEANG---VPIIGTSPDAIDRAEDRERFQSAVERLGLKQPENGTVTALEQAVLLAERIT 708

Query: 807  YPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALAD 866
            YP+VVRPSYVLGGRAMEIVY ++ L  Y   AV V  E PVL+D++L DA E+DVDA+ D
Sbjct: 709  YPLVVRPSYVLGGRAMEIVYDEQDLRRYFAEAVSVSNESPVLLDRFLDDATELDVDAICD 768

Query: 867  SCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNC 926
               +VVIGGIMEHIEQAG+HSGDS C +P  T+S    D I     KLA  L V GLMN 
Sbjct: 769  GT-DVVIGGIMEHIEQAGIHSGDSGCSLPPYTLSKKIQDEIREQVRKLALELGVIGLMNV 827

Query: 927  QYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPKH 986
            Q+A+    D+YL+E NPRA+RTVPFVSKA G PLAK AA VM+G+SL + GFTKE+IP +
Sbjct: 828  QFAV-KGDDIYLIEVNPRAARTVPFVSKATGAPLAKIAARVMAGQSLQEQGFTKEIIPPY 886

Query: 987  VSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVFL 1046
             SVKE VLPF KF G D LLGPEMRSTGEVMG+  SF  A+AKAQ+ A   +P  G   L
Sbjct: 887  YSVKEVVLPFAKFPGVDPLLGPEMRSTGEVMGVGSSFAEAYAKAQLGANHAVPKEGRALL 946

Query: 1047 SLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVAN 1106
            S+    K  +  +A   L++G+++ +T GTA  L    I    V K+HEGRPH  D + N
Sbjct: 947  SVRHSDKAQVVDLAAKLLELGYELDATHGTAVALGEASINPRLVNKVHEGRPHILDRIKN 1006

Query: 1107 GQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAI 1154
            G+   +V T+ G    Q D  +LRR  L  KV   TT++ A A   AI
Sbjct: 1007 GEYTYIVNTAEGRVAIQ-DSKQLRRAALQNKVAYTTTMNEAFATCMAI 1053


>gi|330993912|ref|ZP_08317842.1| Carbamoyl-phosphate synthase large chain [Gluconacetobacter sp.
            SXCC-1]
 gi|329758858|gb|EGG75372.1| Carbamoyl-phosphate synthase large chain [Gluconacetobacter sp.
            SXCC-1]
          Length = 1084

 Score = 1229 bits (3181), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 620/1098 (56%), Positives = 795/1098 (72%), Gaps = 34/1098 (3%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD+R ILI+GAGPIVIGQACEFDYSG QACKALKEEGY VIL+NSNPATIMTDPGLAD
Sbjct: 3    KRTDIRSILIIGAGPIVIGQACEFDYSGAQACKALKEEGYRVILVNSNPATIMTDPGLAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+TPE VE+++ +E+PDA+LPTMGGQTALN A+AL  SG L+K+ VELIGA  + 
Sbjct: 63   ATYIEPITPEFVERIIAREKPDAILPTMGGQTALNTAMALDRSGFLKKHNVELIGANAEV 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I +AEDR  F++AM  IG+++P S I +TL+E       +G  P +IRP+FT+GG+GGGI
Sbjct: 123  IDRAEDRQKFREAMDEIGIESPRSLIAHTLEEARRALETVG-LPAVIRPSFTMGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEF+ I  +GL AS T++VL+E+S+LGWKEYE+EV+RD ADN +IICSIEN+DPMG
Sbjct: 182  AYNREEFDRIVSSGLDASPTTEVLIEESVLGWKEYEMEVVRDTADNCIIICSIENIDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPA TLTDKEYQRLRD S+A +R IGVE GGSNVQF +NPVDG V+VIEMN
Sbjct: 242  VHTGDSITVAPALTLTDKEYQRLRDMSLACLRRIGVETGGSNVQFGINPVDGRVVVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRF 447
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT  TPASFEP+IDYVV KIPRF
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGYTLDELTNDITGSTPASFEPTIDYVVVKIPRF 361

Query: 448  AFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDWE 507
             FEKFPG+  LL+T MKSVGEAMA+GR+F E+ QK LRS+E G +G         D   +
Sbjct: 362  TFEKFPGTPALLSTSMKSVGEAMAIGRSFPEALQKGLRSMEIGLAGLDPVEAPG-DGGPD 420

Query: 508  QLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSVS 567
              + +L  P P+R+     A++ G+ V++IH+    + WFL +  +++  E  ++   + 
Sbjct: 421  AFRAALSQPRPERILMAAQALRAGLSVEDIHDACRFEPWFLRELAKIVAAEHAVVRDGLP 480

Query: 568  NMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTPY 627
                D    +K  GFSD Q+A  + + E EV + R S GV+P YKR+DTCA EF + TPY
Sbjct: 481  E-DADSLRALKAMGFSDIQLARLSGTQEGEVAKLRESRGVLPVYKRIDTCAGEFASPTPY 539

Query: 628  MYSSYDF-----ECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIM 682
            MYSSY+      ECES PT ++K++ILGGGPNRIGQGIEFDYCC H +++L+ AG+ETIM
Sbjct: 540  MYSSYEGGYGVPECESRPTDRRKIVILGGGPNRIGQGIEFDYCCVHAAYALREAGFETIM 599

Query: 683  MNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGI----IVQFGGQTPLKLSLPI 738
            +N NPETVSTDYDTSDRLYFEPLT EDV+ +I  E+ +G     IVQ+GGQTPLKLS   
Sbjct: 600  VNCNPETVSTDYDTSDRLYFEPLTAEDVIALIRREQAKGTVLGCIVQYGGQTPLKLS--- 656

Query: 739  HQYLDEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADA 798
                   R   A+G   + + GT  D+ID AEDRERF A++  L + QP  GIA++ A+A
Sbjct: 657  -------RALEAAG---IPLLGTPADAIDRAEDRERFQAMLHRLGLRQPANGIARNPAEA 706

Query: 799  LAIAKEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVD----PERPVLIDKYLS 854
             A+A++IGYPVVVRPSYVLGGRAMEIV+   +L  Y+  A+++        PVLID YL+
Sbjct: 707  EAVAEKIGYPVVVRPSYVLGGRAMEIVHDRASLQRYMRVALQLAGAEVANGPVLIDHYLN 766

Query: 855  DAIEIDVDALADSCGN-VVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIK 913
            DAIE DVD +AD  GN V + G+MEHIE+AG+HSGDSAC +P  T+S + +  + + T  
Sbjct: 767  DAIEADVDCIAD--GNEVYVAGVMEHIEEAGIHSGDSACSLPPYTLSPAIVTELKAQTEA 824

Query: 914  LAKRLNVCGLMNCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSL 973
            +A+ L + GLMN QYAI    D+++LE NPRASRTVPFV+KA G P+AK  A VM+G  L
Sbjct: 825  MARELGIVGLMNVQYAIKGH-DIFVLEVNPRASRTVPFVAKATGVPVAKIGARVMAGAKL 883

Query: 974  NDLGFTKEVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIA 1033
             +       +  HV+VKEAV PF +F   D +LGPEMRSTGEVMG+D SF  AFAK+Q+A
Sbjct: 884  GEFRLDDRAVAPHVAVKEAVFPFNRFPDVDTILGPEMRSTGEVMGLDASFERAFAKSQLA 943

Query: 1034 AGQKLPLSGTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKM 1093
            AG KLP SGTVFLS+ D  K  ++ I +   ++GF I++T GTA  L   G+ V  V K+
Sbjct: 944  AGVKLPRSGTVFLSVRDSDKAAVKSIGRLLAEMGFTIMATRGTAKCLREAGVNVNVVNKV 1003

Query: 1094 HEGRPHAGDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEA 1153
             EGRP+  D + +G+IQM++ T+ G      D   +RR  L + +P  TT++GA A   A
Sbjct: 1004 LEGRPNCVDAIRSGEIQMVINTAQGAQAVS-DSFDIRRSALTHGIPHYTTIAGARAATHA 1062

Query: 1154 IRSLKSNTVTMTALQDFF 1171
            I +++   + +  LQ +F
Sbjct: 1063 ISAMREGVLEVAPLQSYF 1080


>gi|73541863|ref|YP_296383.1| carbamoyl phosphate synthase large subunit [Ralstonia eutropha
            JMP134]
 gi|72119276|gb|AAZ61539.1| carbamoyl-phosphate synthase large subunit [Ralstonia eutropha
            JMP134]
          Length = 1082

 Score = 1229 bits (3181), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 623/1085 (57%), Positives = 805/1085 (74%), Gaps = 32/1085 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILI+GAGPI+IGQACEFDYSG QACKAL+EEG++VIL+NSNPATIMTDP  AD
Sbjct: 3    KRTDIKSILIIGAGPIIIGQACEFDYSGAQACKALREEGFKVILVNSNPATIMTDPATAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+T E+VE+++EKERPDA+LPTMGGQTALN A+ L   G L+KY VELIGA  +A
Sbjct: 63   VTYIEPITWEVVERIIEKERPDAILPTMGGQTALNCALDLHRHGVLDKYKVELIGASPEA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGE------FPLIIRPAFTLG 261
            I KAEDR  FK AM  IG+ +  SGI ++++E +++   I +      +P++IRP+FTLG
Sbjct: 123  IDKAEDRQKFKDAMTKIGLGSAKSGIAHSMEEALAVQTRIAQDTGTSGYPIVIRPSFTLG 182

Query: 262  GTGGGIAYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIE 321
            GTGGGIAYN+EEFE ICK GL  S T ++L+E+SLLGWKEYE+EV+RD ADN +IICSIE
Sbjct: 183  GTGGGIAYNREEFEEICKRGLDLSPTRELLIEESLLGWKEYEMEVVRDKADNCIIICSIE 242

Query: 322  NVDPMGVHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEV 381
            N+DPMG+HTGDSITVAPAQTLTDKEYQ LR+ S+A++REIGV+ GGSNVQF++NP DG +
Sbjct: 243  NLDPMGIHTGDSITVAPAQTLTDKEYQILRNASLAVLREIGVDTGGSNVQFSINPKDGRM 302

Query: 382  MVIEMNPRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYV 440
            +VIEMNPRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ N+IT   TPASFEPSIDYV
Sbjct: 303  IVIEMNPRVSRSSALASKATGFPIAKVAAKLAVGYTLDELKNEITGGATPASFEPSIDYV 362

Query: 441  VTKIPRFAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVK 500
            VTK+PRFAFEKFP ++  LTTQMKSVGE MA+GRTFQESFQKALR LE G  G     + 
Sbjct: 363  VTKVPRFAFEKFPQADSHLTTQMKSVGEVMAMGRTFQESFQKALRGLEVGVDG-----LD 417

Query: 501  ELDWDWEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQF 560
            E   D +++   +    PDR+  +  A + GM ++E++  + ID WFL Q ++++  E  
Sbjct: 418  EKSTDRDEIVEEIGEAGPDRIWYVGDAFRIGMSLEEVYAETDIDPWFLAQIEDIVKTEGQ 477

Query: 561  LLTQSVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAE 620
            +  +++  ++  +   VK++GFSD+++A   K+  K VRE R++  V P YKRVDTCAAE
Sbjct: 478  IKARTLETLSAAELRYVKQKGFSDRRLAKLLKTKAKAVREARIANNVRPVYKRVDTCAAE 537

Query: 621  FEANTPYMYSSYDF---ECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAG 677
            F  NT YMYS+Y+    ECE+ PT KKK+++LGGGPNRIGQGIEFDYCC H + +L+  G
Sbjct: 538  FATNTAYMYSTYEAEHGECEANPTDKKKIMVLGGGPNRIGQGIEFDYCCVHAALALREDG 597

Query: 678  YETIMMNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLP 737
            YETIM+N NPETVSTDYDTSDRLYFEP+T+EDVL ++ +E+P G+IVQ+GGQTPLKL+L 
Sbjct: 598  YETIMVNCNPETVSTDYDTSDRLYFEPVTLEDVLEIVAIEKPVGVIVQYGGQTPLKLALD 657

Query: 738  IHQYLDEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEAD 797
                L+ + +P         I GTSPD IDAAEDRERF  ++++L + QP    A++E +
Sbjct: 658  ----LERNGVP---------IIGTSPDMIDAAEDRERFQKLLQDLGLRQPPNRTARAEDE 704

Query: 798  ALAIAKEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAI 857
            AL +A+EIGYP+VVRPSYVLGGRAMEIV+    L  Y+  AV+V  + PVL+D++L+DAI
Sbjct: 705  ALRLAEEIGYPLVVRPSYVLGGRAMEIVHEPRDLERYMREAVKVSNDSPVLLDRFLNDAI 764

Query: 858  EIDVDALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKR 917
            E DVDAL+D    V IGG+MEHIEQAGVHSGDSAC +P  ++S+  +  +   T  +AK 
Sbjct: 765  ECDVDALSDG-KRVFIGGVMEHIEQAGVHSGDSACSLPPYSLSAETVAELKRQTAAMAKA 823

Query: 918  LNVCGLMNCQYAITTSG---DVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLN 974
            LNV GLMN Q+AI  +     VY+LE NPRASRTVP+VSKA G  LAK AA  M+G+SL+
Sbjct: 824  LNVVGLMNVQFAIQQNNGVDTVYVLEVNPRASRTVPYVSKATGLQLAKIAARCMAGQSLD 883

Query: 975  DLGFTKEVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAA 1034
              G   EV+P + SVKEAV PF KF G D +LGPEMRSTGEVMG+  +F  A  K+Q+AA
Sbjct: 884  SQGVAAEVVPPYFSVKEAVFPFNKFPGVDPVLGPEMRSTGEVMGVGKTFGEALFKSQLAA 943

Query: 1035 GQKLPLSGTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMH 1094
            G +LP  GTV +++ D  K     +A+   D+G+ IV+T GTA  +E  GI V+ V K+ 
Sbjct: 944  GSRLPERGTVLITVKDSDKVRAVAVARMLHDMGYPIVATRGTASAIEAAGIPVKVVNKVK 1003

Query: 1095 EGRPHAGDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAI 1154
            +GRPH  DM+ NG++ ++  T         D   +R   LA +VP  TT++GA A  E +
Sbjct: 1004 DGRPHIVDMIKNGELALVFTTVDETRGAIADSRSIRTSALANRVPYYTTIAGASAAVEGL 1063

Query: 1155 RSLKS 1159
            + ++S
Sbjct: 1064 KHMQS 1068


>gi|293408125|ref|ZP_06651965.1| carbamoyl-phosphate synthase [Escherichia coli B354]
 gi|291472376|gb|EFF14858.1| carbamoyl-phosphate synthase [Escherichia coli B354]
          Length = 1072

 Score = 1229 bits (3181), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 618/1070 (57%), Positives = 780/1070 (72%), Gaps = 18/1070 (1%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILILGAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  E+V +++EKERPDA+LPTMGGQTALN A+ L   G LE++GV +IGA  DA
Sbjct: 63   ATYIEPIHWEVVRKIIEKERPDAVLPTMGGQTALNCALELERQGVLEEFGVTMIGATADA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  F  AMK IG++T  SGI +T++E +++A ++G FP IIRP+FT+GG+GGGI
Sbjct: 123  IDKAEDRRRFDVAMKKIGLETARSGIAHTMEEALAVAADVG-FPCIIRPSFTMGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEFE IC  GL  S T ++L+++SL+GWKEYE+EV+RD  DN +I+CSIEN D MG
Sbjct: 182  AYNREEFEEICARGLDLSPTKELLIDESLIGWKEYEMEVVRDKNDNCIIVCSIENFDAMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            +HTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGVE GGSNVQFAVNP +G ++VIEMN
Sbjct: 242  IHTGDSITVAPAQTLTDKEYQIMRNASMAVLREIGVETGGSNVQFAVNPKNGRLIVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT  +TPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGYTLDELMNDITGGRTPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            F FEKF G+   LTTQMKSVGE MA+GRT QES QKALR LE G +G+      +     
Sbjct: 362  FNFEKFAGANDRLTTQMKSVGEVMAIGRTQQESLQKALRGLEVGATGFDPKVSLDDPEAL 421

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
             +++  L+    +R+  I  A + G+ VD +  L+ ID+WFL Q +EL+ +E+ +    +
Sbjct: 422  TKIRRELKDAGAERIWYIADAFRAGLSVDGVFNLTNIDRWFLVQIEELVRLEEKVAEVGI 481

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
            + +  D   ++KR+GF+D ++A      E E+R+ R    + P YKRVDTCAAEF  +T 
Sbjct: 482  TGLNADFLRQLKRKGFADARLAKLAGVREAEIRKLRDQYDLHPVYKRVDTCAAEFATDTA 541

Query: 627  YMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSN 686
            YMYS+Y+ ECES P+ + K+++LGGGPNRIGQGIEFDYCC H S +L+  GYETIM+N N
Sbjct: 542  YMYSTYEEECESNPSDRDKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVNCN 601

Query: 687  PETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHR 746
            PETVSTDYDTSDRLYFEP+T+EDVL ++ +E+P+G+IVQ+GGQTPLKL+          R
Sbjct: 602  PETVSTDYDTSDRLYFEPVTLEDVLEIVRIEKPKGVIVQYGGQTPLKLA----------R 651

Query: 747  LPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEIG 806
               A+G   V + GTSPD+ID AEDRERF   +  L ++QP      +   A+  AKEIG
Sbjct: 652  ALEAAG---VPVIGTSPDAIDRAEDRERFQHAVDRLKLKQPANATVTAIEMAVEKAKEIG 708

Query: 807  YPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALAD 866
            YP+VVRPSYVLGGRAMEIVY +  L  Y + AV V  + PVL+D +L DA+E+DVDA+ D
Sbjct: 709  YPLVVRPSYVLGGRAMEIVYDEADLRRYFQTAVSVSNDAPVLLDHFLDDAVEVDVDAICD 768

Query: 867  SCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNC 926
                V+IGGIMEHIEQAGVHSGDSAC +P  T+S    D +     KLA  L V GLMN 
Sbjct: 769  G-EMVLIGGIMEHIEQAGVHSGDSACSLPAYTLSQEIQDVMRQQVQKLAFELQVRGLMNV 827

Query: 927  QYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPKH 986
            Q+A+  + +VYL+E NPRA+RTVPFVSKA G PLAK AA VM+GKSL + G TKEVIP +
Sbjct: 828  QFAVKNN-EVYLIEVNPRAARTVPFVSKATGVPLAKVAARVMAGKSLAEQGVTKEVIPPY 886

Query: 987  VSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVFL 1046
             SVKE VLPF KF G D LLGPEMRSTGEVMG+  +F  AFAKAQ+ +   +   G   L
Sbjct: 887  YSVKEVVLPFNKFPGVDPLLGPEMRSTGEVMGVGRTFAEAFAKAQLGSNSTMKKHGRALL 946

Query: 1047 SLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVAN 1106
            S+ +  K  +  +A   L  GF++ +T GTA  L   GI    V K+HEGRPH  D + N
Sbjct: 947  SVREGDKERVVDLAAKLLKQGFELDATHGTAIVLGEAGINPRLVNKVHEGRPHIQDRIKN 1006

Query: 1107 GQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRS 1156
            G+   ++ T+SG    + D   +RR  L YKV   TT++G  A A A+ +
Sbjct: 1007 GEYTYIINTTSGRRAIE-DSRVIRRSALQYKVHYDTTLNGGFATAMALNA 1055


>gi|291616228|ref|YP_003518970.1| CarB [Pantoea ananatis LMG 20103]
 gi|291151258|gb|ADD75842.1| CarB [Pantoea ananatis LMG 20103]
          Length = 1090

 Score = 1229 bits (3181), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 617/1079 (57%), Positives = 789/1079 (73%), Gaps = 19/1079 (1%)

Query: 80   SSKDQKLGKRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATI 139
            S+++  + KRTD++ ILILGAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATI
Sbjct: 9    SNQELIMPKRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATI 68

Query: 140  MTDPGLADRTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVE 199
            MTDP +AD TYI P+  E+V +++EKERPDA+LPTMGGQTALN A+ L   G LE++GV 
Sbjct: 69   MTDPEMADATYIEPIHWEVVRKIIEKERPDAVLPTMGGQTALNCALELERQGVLEEFGVT 128

Query: 200  LIGAKLDAIKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFT 259
            +IGA  DAI KAEDR  F  AMK+IG+ T  SGI +T+DE +++A ++G FP IIRP+FT
Sbjct: 129  MIGATADAIDKAEDRRRFDVAMKSIGLDTARSGIAHTMDEALAVAADVG-FPCIIRPSFT 187

Query: 260  LGGTGGGIAYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICS 319
            +GGTGGGIAYN+EEFE IC+ GL  S T+++L+++SL+GWKEYE+EV+RD  DN +I+CS
Sbjct: 188  MGGTGGGIAYNREEFEEICERGLDLSPTNELLIDESLIGWKEYEMEVVRDKNDNCIIVCS 247

Query: 320  IENVDPMGVHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDG 379
            IEN D MG+HTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGVE GGSNVQFAVNP +G
Sbjct: 248  IENFDAMGIHTGDSITVAPAQTLTDKEYQIMRNASLAVLREIGVETGGSNVQFAVNPKNG 307

Query: 380  EVMVIEMNPRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSID 438
             ++VIEMNPRVSRSSALASKATGFPIAK+AAKL+VG++LD++ NDIT  +TPASFEPSID
Sbjct: 308  RLIVIEMNPRVSRSSALASKATGFPIAKVAAKLAVGFTLDELMNDITGGRTPASFEPSID 367

Query: 439  YVVTKIPRFAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSN 498
            YVVTKIPRF FEKF G+   LTTQMKSVGE MA+GRTFQES QKALR LE G +G+    
Sbjct: 368  YVVTKIPRFNFEKFAGANDRLTTQMKSVGEVMAIGRTFQESVQKALRGLEVGANGFDPKV 427

Query: 499  VKELDWDWEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVE 558
              +      +++  L+    DR+  I  A + GM VD +  L+ ID+WFL Q +EL+ +E
Sbjct: 428  HLDDAEALTRIRRELKDAGSDRIWYIADAFRAGMSVDGVFNLTNIDRWFLVQIEELVRLE 487

Query: 559  QFLLTQSVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCA 618
            + +  + V+ +  D    +KR+GF+D ++A      E E+R+ R    + P YKRVDTCA
Sbjct: 488  EQVAREGVNGLNADFLRTLKRKGFADARLASLVGVAEGEIRKLRQHHNLHPVYKRVDTCA 547

Query: 619  AEFEANTPYMYSSYDFECESAPTQ-KKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAG 677
            AEF  +T YMYS+Y+ ECE+ P Q + K+++LGGGPNRIGQGIEFDYCC H + +L+  G
Sbjct: 548  AEFSTDTAYMYSTYEEECEANPNQDRDKIMVLGGGPNRIGQGIEFDYCCVHAALALREDG 607

Query: 678  YETIMMNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLP 737
            +ETIM+N NPETVSTDYDTSDRLYFEP+T+EDVL ++ +E+P+G+IVQ+GGQTPLKL+  
Sbjct: 608  FETIMVNCNPETVSTDYDTSDRLYFEPVTLEDVLEIVRIEKPKGVIVQYGGQTPLKLA-- 665

Query: 738  IHQYLDEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEAD 797
                    R   A+G   V + GTSPD+ID AEDRERF   +  L+++QP      +   
Sbjct: 666  --------RALEAAG---VPVIGTSPDAIDRAEDRERFQQAVDRLNLKQPANATVATLEQ 714

Query: 798  ALAIAKEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAI 857
            A+  A  IGYP+VVRPSYVLGGRAMEIVY +  L  Y + AV V  + PVL+D++L DA+
Sbjct: 715  AVEKAAGIGYPLVVRPSYVLGGRAMEIVYDEIDLKRYFQTAVSVSNDAPVLLDRFLDDAV 774

Query: 858  EIDVDALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKR 917
            E+DVDA+ D    V+IGGIMEHIEQAGVHSGDSAC +P  T+S    + +     KLA  
Sbjct: 775  EVDVDAICDG-ERVLIGGIMEHIEQAGVHSGDSACSLPAYTLSQDIQNVMRQQVEKLAFE 833

Query: 918  LNVCGLMNCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLG 977
            LNV GLMN Q+A+  + +VYL+E NPRA+RTVPFVSKA G PLAK AA VM+GK+L + G
Sbjct: 834  LNVRGLMNVQFAVKDN-EVYLIEVNPRAARTVPFVSKATGVPLAKVAARVMAGKTLAEQG 892

Query: 978  FTKEVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQK 1037
             T+EVIP + SVKE VLPF KFQG D +LGPEMRSTGEVMG+  +F  AFAKA + A   
Sbjct: 893  VTEEVIPPYYSVKEVVLPFNKFQGVDPILGPEMRSTGEVMGVGRTFAEAFAKAMLGAQSN 952

Query: 1038 LPLSGTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGR 1097
            +  +G   LS+ +  K  +  +A      GF++ +T GTA  L   GI    V K+HEGR
Sbjct: 953  MKKTGRALLSVREGDKKRIVDLAAKLQKFGFELDATHGTAVVLGEAGINPRLVNKVHEGR 1012

Query: 1098 PHAGDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRS 1156
            PH  D + NG+   +V T++G    + D   +RR  L YKV   TT++G  A A A+ +
Sbjct: 1013 PHIQDRLKNGEYAYIVNTTAGRQAIE-DSKLIRRSALQYKVHYDTTLNGGFATAMALNA 1070


>gi|397668298|ref|YP_006509835.1| carbamoyl-phosphate synthase large subunit [Legionella pneumophila
            subsp. pneumophila]
 gi|395131709|emb|CCD10002.1| carbamoyl-phosphate synthase large subunit [Legionella pneumophila
            subsp. pneumophila]
          Length = 1067

 Score = 1229 bits (3181), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 619/1086 (56%), Positives = 790/1086 (72%), Gaps = 25/1086 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILILGAGPIVIGQACEFDYSGTQA +ALKEEGY VIL+NSNPATIMTDP LAD
Sbjct: 3    KRTDIKSILILGAGPIVIGQACEFDYSGTQAVRALKEEGYRVILVNSNPATIMTDPELAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  + V +++E ERPDALLPTMGGQTALN A+ L   G L KY VE+IGA  +A
Sbjct: 63   ATYIEPVQWKEVARIIEIERPDALLPTMGGQTALNCALDLVREGVLAKYSVEMIGATREA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I +AEDR+ F+Q M  IG+  P S I ++L+E I +   +G FP IIRP+FT+GG+GGGI
Sbjct: 123  IDRAEDREKFRQLMIKIGLDMPRSAIAHSLEEAIQVQARLG-FPAIIRPSFTMGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEFE IC  GL  S T ++L+++S+LGWKEYE+EV+RD  DN +I+C+IEN DPMG
Sbjct: 182  AYNREEFEEICIRGLELSPTRELLIDESVLGWKEYEMEVVRDKNDNCIIVCTIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQR+RD +I ++R +GV+ GGSNVQFA+NP DG ++V+EMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQRMRDAAIKVLRAVGVDTGGSNVQFAINPEDGRMLVVEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ N+IT  KTPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGYTLDELKNEITGGKTPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            F F+KFP +   LTTQMKSVGE MA+G  FQES QKA+R LE G  G      KE   D 
Sbjct: 362  FNFDKFPQTPDTLTTQMKSVGEVMAIGSNFQESLQKAIRGLEIGRCGLHSLFQKE---DM 418

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
             +L+  LR P PDR+  I  A ++ + ++EIH  S +D WFL Q +EL+ +E+ ++ +++
Sbjct: 419  ARLRGHLREPTPDRLWYIADAFRQNLSLEEIHLESRVDPWFLAQIQELVLLERSIIGKTI 478

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
             ++ K   + +K RGF+D  +A     TE EVR +R+ L ++P YKR+D+CA EF ++T 
Sbjct: 479  RDLDKTTLHLMKHRGFADAYLAKLLGCTEAEVRARRVELEILPVYKRIDSCAGEFPSDTA 538

Query: 627  YMYSSYDFECESAP-TQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNS 685
            YMYS Y+  CE+ P + KKK++ILGGGPNRIGQGIEFDYCC H + SL+SAGY+TIM+N 
Sbjct: 539  YMYSCYEGSCEARPESNKKKIMILGGGPNRIGQGIEFDYCCVHAALSLRSAGYQTIMVNC 598

Query: 686  NPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEH 745
            NPETVSTD+DTSDRLYFEP+T+EDVL+++ +E+PEG+IV +GGQTPLKL+          
Sbjct: 599  NPETVSTDFDTSDRLYFEPVTLEDVLSIVAMEQPEGVIVHYGGQTPLKLA---------- 648

Query: 746  RLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEI 805
            R   A+G   V+I GTS D+ID AEDRERF  ++KEL + QP  G  +SEA+A+ +A +I
Sbjct: 649  RDLEANG---VKIIGTSSDAIDMAEDRERFQQMVKELKLHQPDNGTVRSEAEAIELANKI 705

Query: 806  GYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALA 865
            GYP+VVRPSYVLGGRAMEIVY +E L  YL +AVEV  + PVL+DK+L+DAIE+D+DA+ 
Sbjct: 706  GYPLVVRPSYVLGGRAMEIVYQEEDLRYYLSHAVEVSNDSPVLLDKFLNDAIEVDIDAVC 765

Query: 866  DSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMN 925
            D   +V+IG IMEHIEQAG+HSGDSAC +P  ++       +     K+A +L V GL+N
Sbjct: 766  DG-KDVLIGAIMEHIEQAGIHSGDSACTLPPFSLGVVVQQDLIEQIRKMALKLGVVGLIN 824

Query: 926  CQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTK-EVIP 984
             Q+AI  + D+Y+LE NPRASRTVPFVSKA G PLAK AAL   G SL D G  +    P
Sbjct: 825  AQFAI-QADDIYVLEVNPRASRTVPFVSKATGLPLAKIAALCKVGISLKDQGLNQNHHAP 883

Query: 985  KHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTV 1044
               S+K  V PF KF G D +LGPEM+STGEVMGI   F  A+AKAQ+ AG  +      
Sbjct: 884  SFYSIKLPVFPFIKFSGVDSILGPEMKSTGEVMGIAKRFGQAYAKAQLGAGCHIAKRRRA 943

Query: 1045 FLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMV 1104
            F+S+ D  K  +  IAK  +++GF+I++T GTA  L+  G+   RV K+ EGRPH  D +
Sbjct: 944  FVSVRDADKTRVGEIAKRLIELGFEIIATRGTALALQAAGVDCRRVFKVAEGRPHVLDFI 1003

Query: 1105 ANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTVTM 1164
             N +I  +V T+ G      D   +RR  L +KV   TT+SGA A   A++     TVT 
Sbjct: 1004 KNNEIDFIVNTTEGKQAIA-DSFAIRRNALQHKVSYTTTLSGAEAACLAMKYEDRETVTR 1062

Query: 1165 TALQDF 1170
              LQD 
Sbjct: 1063 --LQDL 1066


>gi|432818254|ref|ZP_20051981.1| carbamoyl-phosphate synthase large chain [Escherichia coli KTE115]
 gi|431359243|gb|ELG45888.1| carbamoyl-phosphate synthase large chain [Escherichia coli KTE115]
          Length = 1072

 Score = 1229 bits (3181), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 617/1070 (57%), Positives = 782/1070 (73%), Gaps = 18/1070 (1%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILILGAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  E+V +++EKERPDA+LPTMGGQTALN A+ L   G LE++GV +IGA  DA
Sbjct: 63   ATYIEPIHWEVVRKIIEKERPDAVLPTMGGQTALNCALELERQGVLEEFGVTMIGATADA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  F  AMK IG++T  SGI +T++E +++A ++G FP IIRP+FT+GG+GGGI
Sbjct: 123  IDKAEDRRRFDVAMKKIGLETARSGIAHTMEEALAVAADVG-FPCIIRPSFTMGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEFE IC  GL  S T ++L+++SL+GWKEYE+EV+RD  DN +I+CSIEN D MG
Sbjct: 182  AYNREEFEEICARGLDLSPTKELLIDESLIGWKEYEMEVVRDKNDNCIIVCSIENFDAMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            +HTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGVE GGSNVQFAVNP +G ++VIEMN
Sbjct: 242  IHTGDSITVAPAQTLTDKEYQIMRNASMAVLREIGVETGGSNVQFAVNPKNGRLIVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT  +TPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGYTLDELMNDITGGRTPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            F FEKF G+   LTTQMKSVGE MA+GRT QES QKALR LE G +G+      +     
Sbjct: 362  FNFEKFAGANDRLTTQMKSVGEVMAVGRTQQESLQKALRGLEVGATGFDPKVSLDDPEAL 421

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
             +++  L+    +R+  I  A + G+ VD +  L+ ID+WFL Q +EL+ +E+ +    +
Sbjct: 422  TKIRRELKDAGAERIWYIADAFRAGLSVDGVFNLTNIDRWFLVQIEELVRLEEKVAEVGI 481

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
            + +  D   ++KR+GF+D ++A      E E+R+ R    + P YKRVDTCAAEF  +T 
Sbjct: 482  TGLNADFLRQLKRKGFADARLAKLAGVREAEIRKLRDQYDLHPVYKRVDTCAAEFATDTA 541

Query: 627  YMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSN 686
            YMYS+Y+ ECES P+ ++K+++LGGGPNRIGQGIEFDYCC H S +L+  GYETIM+N N
Sbjct: 542  YMYSTYEEECESNPSDREKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVNCN 601

Query: 687  PETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHR 746
            PETVSTDYDTSDRLYFEP+T+EDVL ++ +E+P+G+IVQ+GGQTPLKL+          R
Sbjct: 602  PETVSTDYDTSDRLYFEPVTLEDVLEIVRIEKPKGVIVQYGGQTPLKLA----------R 651

Query: 747  LPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEIG 806
               A+G   V + GTSPD+ID AEDRERF   ++ L ++QP      +   A+  AKEIG
Sbjct: 652  ALEAAG---VPVIGTSPDAIDRAEDRERFQHAVERLKLKQPANATVTTIEMAVEKAKEIG 708

Query: 807  YPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALAD 866
            YP+VVRPSYVLGGRAMEIVY +  L  Y + AV V  + PVL+D +L DA+E+DVDA+ D
Sbjct: 709  YPLVVRPSYVLGGRAMEIVYDEADLRRYFQTAVSVSNDAPVLLDHFLDDAVEVDVDAICD 768

Query: 867  SCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNC 926
                V+IGGIMEHIEQAGVHSGDSAC +P  T+S    D +     KLA  L V GLMN 
Sbjct: 769  G-EMVLIGGIMEHIEQAGVHSGDSACSLPAYTLSQEIQDVMRQQVQKLAFELQVRGLMNV 827

Query: 927  QYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPKH 986
            Q+A+  + +VYL+E NPRA+RTVPFVSKA G PLAK AA VM+GK+L + G TKEVIP +
Sbjct: 828  QFAVKNN-EVYLIEVNPRAARTVPFVSKATGVPLAKVAARVMAGKTLAEQGVTKEVIPPY 886

Query: 987  VSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVFL 1046
             SVKE VLPF KF G D LLGPEMRSTGEVMG+  +F  AFAKAQ+ +   +   G   L
Sbjct: 887  YSVKEVVLPFNKFPGVDPLLGPEMRSTGEVMGVGRTFAEAFAKAQLGSNSTMKKHGRALL 946

Query: 1047 SLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVAN 1106
            S+ +  K  +  +A   L  GF++ +T GTA  L   GI    V K+HEGRPH  D + N
Sbjct: 947  SVREGDKERVVDLAAKLLKQGFELDATHGTAIVLGEAGINPRLVNKVHEGRPHIQDRIKN 1006

Query: 1107 GQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRS 1156
            G+   ++ T+SG    + D   +RR  L YKV   TT++G  A A A+ +
Sbjct: 1007 GEYTYIINTTSGRRAIE-DSRVIRRSALQYKVHYDTTLNGGFATAMALNA 1055


>gi|296109365|ref|YP_003616314.1| carbamoyl-phosphate synthase, large subunit [methanocaldococcus
            infernus ME]
 gi|295434179|gb|ADG13350.1| carbamoyl-phosphate synthase, large subunit [Methanocaldococcus
            infernus ME]
          Length = 1058

 Score = 1229 bits (3181), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 628/1086 (57%), Positives = 809/1086 (74%), Gaps = 32/1086 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KR D++KILI+G+GPIV+GQACEFDYSG+QACKAL++ GYEV+L+NSNPATIMTD  +AD
Sbjct: 3    KREDIKKILIIGSGPIVVGQACEFDYSGSQACKALRKLGYEVVLVNSNPATIMTDTDMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
            R YI P+T E++E+++EKERPDA+LPT+GGQTALNLAV LAE G L+KY VELIGA L+A
Sbjct: 63   RVYIEPLTSEVLEKIIEKERPDAILPTLGGQTALNLAVELAEKGILDKYDVELIGANLEA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            IK+ EDR+LFK+  K  GV+   S    ++DE +  A EIG +P+++RPAFTLGGTGGGI
Sbjct: 123  IKRGEDRELFKECCKKAGVEVLRSKTVFSVDEALEFAEEIG-YPIVVRPAFTLGGTGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN EE + I   GL  SL +QVL+E+S+LGWKE+E EV+RD  DNV+IIC+IEN+DPMG
Sbjct: 182  AYNPEELKEIVSKGLEYSLKNQVLIEESVLGWKEFEYEVIRDKNDNVIIICTIENMDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTL+D+EYQ++RDYSI IIR +GVE GGSN+QFA+NP DG ++ IEMN
Sbjct: 242  VHTGDSITVAPAQTLSDEEYQKMRDYSIKIIRAVGVETGGSNIQFALNPKDGRIVAIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRF 447
            PRVSRSSALASKATG+PIAK+AA+L+VG +LD+I N+IT  T A+FEP+IDYVV K+PR+
Sbjct: 302  PRVSRSSALASKATGYPIAKVAAQLAVGLTLDEIENEIT-GTSAAFEPTIDYVVVKVPRW 360

Query: 448  AFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDWE 507
             F+K  G++P LTTQMKSVGE MA+GRTF+E+ QKALR LE G  G       E     +
Sbjct: 361  DFKKLRGADPTLTTQMKSVGEVMAIGRTFEEALQKALRGLEIGVHGLDGYRKLEK----K 416

Query: 508  QLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSVS 567
            +++  LR+P P+R+  I  A++ G  V+EI EL+ IDKWF+ + K ++D+E+ +     S
Sbjct: 417  EIEKKLRIPTPERIFYIKYALQNGFSVEEIAELTKIDKWFIRKIKNIVDMEEKM---KRS 473

Query: 568  NMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTPY 627
             +++D   E K  GFSD QIA          R+ R  + V   YK VDTCAAEFEA TPY
Sbjct: 474  RLSEDIIREAKYYGFSDTQIANIYNIEPLTFRKFRKEV-VKAKYKFVDTCAAEFEAKTPY 532

Query: 628  MYSSY-DFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSN 686
             YS+Y D E ES  +++KK++ILG GPNRIGQGIEFDYCC HT  ++Q  GYE IM+N N
Sbjct: 533  YYSTYTDREDESRVSKRKKIIILGSGPNRIGQGIEFDYCCVHTIKAVQEEGYEAIMVNCN 592

Query: 687  PETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHR 746
            PETVSTDYDT+D+LYF+PL  EDVLN+++ E+P+G+IVQ GGQTPL L+    +YL+ + 
Sbjct: 593  PETVSTDYDTADKLYFDPLYWEDVLNIVENEKPDGVIVQVGGQTPLNLA----KYLENY- 647

Query: 747  LPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEIG 806
                       I GTS +SID AEDRE+F  I++EL+I QP  GIA +E +AL IAKEIG
Sbjct: 648  -----------IIGTSKESIDLAEDREKFAKILEELNIPQPPNGIAYNEEEALKIAKEIG 696

Query: 807  YPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALAD 866
            YPV+VRPSYVLGGRAM IVY +E L  Y++ AVEV  E PVLIDK+L DA E+DVDA+ D
Sbjct: 697  YPVLVRPSYVLGGRAMRIVYNEEELKEYIKEAVEVSEEHPVLIDKFLEDATEVDVDAICD 756

Query: 867  SCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNC 926
               +V+IGGIMEHIE+AGVHSGDSAC+IP +T+S   ++ I  +T K+A +LNV GL+N 
Sbjct: 757  G-ESVLIGGIMEHIEEAGVHSGDSACVIPPQTLSKEVIEIIKDYTRKIALKLNVKGLINI 815

Query: 927  QYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPKH 986
            QYAI     VY+LEANPRASRTVPF+SKAIG PLAK AA VM GK L +L   KE  PK 
Sbjct: 816  QYAIKDD-KVYVLEANPRASRTVPFLSKAIGLPLAKIAAKVMLGKKLKELN-VKEREPKM 873

Query: 987  VSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVFL 1046
            V VKEAV  FEK+ G ++ L PEM+STGEVMGID +F +A+ KAQ+AAG KLP  GTV  
Sbjct: 874  VCVKEAVFSFEKWPGVEIELSPEMKSTGEVMGIDKNFGLAYYKAQLAAGYKLPTEGTVLF 933

Query: 1047 SLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVAN 1106
            ++    K  +  IAK F ++GFKI++T GT   L+  GI  ERV K+ EGRP+  D++ +
Sbjct: 934  TVGR-DKEKIVDIAKGFKELGFKILATEGTYRVLKNHGIDAERVYKVFEGRPNIIDLMKS 992

Query: 1107 GQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTVTMTA 1166
            G+I +++  S G    + + L +R+  +  ++P ITTV+GA A  EAIRS++   + +  
Sbjct: 993  GKIDLIINISKGKEAKEAEQL-IRKTAIDLRIPYITTVAGARAALEAIRSIREKDIDVYC 1051

Query: 1167 LQDFFD 1172
            + DFF+
Sbjct: 1052 INDFFE 1057


>gi|218703293|ref|YP_002410812.1| carbamoyl phosphate synthase large subunit [Escherichia coli UMN026]
 gi|293403106|ref|ZP_06647203.1| carB [Escherichia coli FVEC1412]
 gi|298378634|ref|ZP_06988518.1| carbamoyl-phosphate synthase large subunit [Escherichia coli
            FVEC1302]
 gi|417584846|ref|ZP_12235630.1| carbamoyl-phosphate synthase large chain [Escherichia coli
            STEC_C165-02]
 gi|419935361|ref|ZP_14452443.1| carbamoyl phosphate synthase large subunit [Escherichia coli 576-1]
 gi|432351670|ref|ZP_19594983.1| carbamoyl-phosphate synthase large chain [Escherichia coli KTE2]
 gi|432400116|ref|ZP_19642877.1| carbamoyl-phosphate synthase large chain [Escherichia coli KTE26]
 gi|432429146|ref|ZP_19671613.1| carbamoyl-phosphate synthase large chain [Escherichia coli KTE181]
 gi|432463888|ref|ZP_19706009.1| carbamoyl-phosphate synthase large chain [Escherichia coli KTE204]
 gi|432474033|ref|ZP_19716050.1| carbamoyl-phosphate synthase large chain [Escherichia coli KTE208]
 gi|432520685|ref|ZP_19757856.1| carbamoyl-phosphate synthase large chain [Escherichia coli KTE228]
 gi|432540858|ref|ZP_19777739.1| carbamoyl-phosphate synthase large chain [Escherichia coli KTE235]
 gi|432634481|ref|ZP_19870389.1| carbamoyl-phosphate synthase large chain [Escherichia coli KTE80]
 gi|432644073|ref|ZP_19879887.1| carbamoyl-phosphate synthase large chain [Escherichia coli KTE83]
 gi|432664192|ref|ZP_19899795.1| carbamoyl-phosphate synthase large chain [Escherichia coli KTE116]
 gi|432773188|ref|ZP_20007490.1| carbamoyl-phosphate synthase large chain [Escherichia coli KTE54]
 gi|432883616|ref|ZP_20098929.1| carbamoyl-phosphate synthase large chain [Escherichia coli KTE158]
 gi|432909536|ref|ZP_20116868.1| carbamoyl-phosphate synthase large chain [Escherichia coli KTE190]
 gi|433017004|ref|ZP_20205283.1| carbamoyl-phosphate synthase large chain [Escherichia coli KTE105]
 gi|433051215|ref|ZP_20238470.1| carbamoyl-phosphate synthase large chain [Escherichia coli KTE122]
 gi|433066143|ref|ZP_20253001.1| carbamoyl-phosphate synthase large chain [Escherichia coli KTE128]
 gi|433156965|ref|ZP_20341852.1| carbamoyl-phosphate synthase large chain [Escherichia coli KTE177]
 gi|433176396|ref|ZP_20360877.1| carbamoyl-phosphate synthase large chain [Escherichia coli KTE82]
 gi|218430390|emb|CAR11257.1| carbamoyl-phosphate synthase large subunit [Escherichia coli UMN026]
 gi|291430021|gb|EFF03035.1| carB [Escherichia coli FVEC1412]
 gi|298280968|gb|EFI22469.1| carbamoyl-phosphate synthase large subunit [Escherichia coli
            FVEC1302]
 gi|345343029|gb|EGW75421.1| carbamoyl-phosphate synthase large chain [Escherichia coli
            STEC_C165-02]
 gi|388404616|gb|EIL65069.1| carbamoyl phosphate synthase large subunit [Escherichia coli 576-1]
 gi|430881249|gb|ELC04503.1| carbamoyl-phosphate synthase large chain [Escherichia coli KTE2]
 gi|430930231|gb|ELC50732.1| carbamoyl-phosphate synthase large chain [Escherichia coli KTE26]
 gi|430948893|gb|ELC68477.1| carbamoyl-phosphate synthase large chain [Escherichia coli KTE181]
 gi|430983575|gb|ELD00232.1| carbamoyl-phosphate synthase large chain [Escherichia coli KTE204]
 gi|431011724|gb|ELD25798.1| carbamoyl-phosphate synthase large chain [Escherichia coli KTE208]
 gi|431046068|gb|ELD56187.1| carbamoyl-phosphate synthase large chain [Escherichia coli KTE228]
 gi|431065360|gb|ELD74132.1| carbamoyl-phosphate synthase large chain [Escherichia coli KTE235]
 gi|431165583|gb|ELE65921.1| carbamoyl-phosphate synthase large chain [Escherichia coli KTE80]
 gi|431175954|gb|ELE75940.1| carbamoyl-phosphate synthase large chain [Escherichia coli KTE83]
 gi|431205470|gb|ELF03957.1| carbamoyl-phosphate synthase large chain [Escherichia coli KTE116]
 gi|431321698|gb|ELG09298.1| carbamoyl-phosphate synthase large chain [Escherichia coli KTE54]
 gi|431420993|gb|ELH03211.1| carbamoyl-phosphate synthase large chain [Escherichia coli KTE158]
 gi|431449290|gb|ELH29865.1| carbamoyl-phosphate synthase large chain [Escherichia coli KTE190]
 gi|431538335|gb|ELI14321.1| carbamoyl-phosphate synthase large chain [Escherichia coli KTE105]
 gi|431576826|gb|ELI49489.1| carbamoyl-phosphate synthase large chain [Escherichia coli KTE122]
 gi|431593333|gb|ELI63890.1| carbamoyl-phosphate synthase large chain [Escherichia coli KTE128]
 gi|431683839|gb|ELJ49466.1| carbamoyl-phosphate synthase large chain [Escherichia coli KTE177]
 gi|431711772|gb|ELJ76082.1| carbamoyl-phosphate synthase large chain [Escherichia coli KTE82]
          Length = 1072

 Score = 1229 bits (3181), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 617/1070 (57%), Positives = 782/1070 (73%), Gaps = 18/1070 (1%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILILGAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  E+V +++EKERPDA+LPTMGGQTALN A+ L   G LE++GV +IGA  DA
Sbjct: 63   ATYIEPIHWEVVRKIIEKERPDAVLPTMGGQTALNCALELERQGVLEEFGVTMIGATADA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  F  AMK IG++T  SGI +T++E +++A ++G FP IIRP+FT+GG+GGGI
Sbjct: 123  IDKAEDRRRFDVAMKKIGLETARSGIAHTMEEALAVAADVG-FPCIIRPSFTMGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEFE IC  GL  S T ++L+++SL+GWKEYE+EV+RD  DN +I+CSIEN D MG
Sbjct: 182  AYNREEFEEICARGLDLSPTKELLIDESLIGWKEYEMEVVRDKNDNCIIVCSIENFDAMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            +HTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGVE GGSNVQFAVNP +G ++VIEMN
Sbjct: 242  IHTGDSITVAPAQTLTDKEYQIMRNASMAVLREIGVETGGSNVQFAVNPKNGRLIVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT  +TPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGYTLDELMNDITGGRTPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            F FEKF G+   LTTQMKSVGE MA+GRT QES QKALR LE G +G+      +     
Sbjct: 362  FNFEKFAGANDRLTTQMKSVGEVMAIGRTQQESLQKALRGLEVGATGFDPKVSLDDPEAL 421

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
             +++  L+    +R+  I  A + G+ VD +  L+ ID+WFL Q +EL+ +E+ +    +
Sbjct: 422  TKIRRELKDAGAERIWYIADAFRAGLSVDGVFNLTNIDRWFLVQIEELVRLEEKVAEVGI 481

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
            + +  D   ++KR+GF+D ++A      E E+R+ R    + P YKRVDTCAAEF  +T 
Sbjct: 482  TGLNADFLRQLKRKGFADARLAKLAGVREAEIRKLRDQYDLHPVYKRVDTCAAEFATDTA 541

Query: 627  YMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSN 686
            YMYS+Y+ ECES P+ ++K+++LGGGPNRIGQGIEFDYCC H S +L+  GYETIM+N N
Sbjct: 542  YMYSTYEEECESNPSDREKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVNCN 601

Query: 687  PETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHR 746
            PETVSTDYDTSDRLYFEP+T+EDVL ++ +E+P+G+IVQ+GGQTPLKL+          R
Sbjct: 602  PETVSTDYDTSDRLYFEPVTLEDVLEIVRIEKPKGVIVQYGGQTPLKLA----------R 651

Query: 747  LPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEIG 806
               A+G   V + GTSPD+ID AEDRERF   ++ L ++QP      +   A+  AKEIG
Sbjct: 652  ALEAAG---VPVIGTSPDAIDRAEDRERFQHAVERLKLKQPANATVTTIEMAVEKAKEIG 708

Query: 807  YPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALAD 866
            YP+VVRPSYVLGGRAMEIVY +  L  Y + AV V  + PVL+D +L DA+E+DVDA+ D
Sbjct: 709  YPLVVRPSYVLGGRAMEIVYDEADLRRYFQTAVSVSNDAPVLLDHFLDDAVEVDVDAICD 768

Query: 867  SCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNC 926
                V+IGGIMEHIEQAGVHSGDSAC +P  T+S    D +     KLA  L V GLMN 
Sbjct: 769  G-EMVLIGGIMEHIEQAGVHSGDSACSLPAYTLSQEIQDVMRQQVQKLAFELQVRGLMNV 827

Query: 927  QYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPKH 986
            Q+A+  + +VYL+E NPRA+RTVPFVSKA G PLAK AA VM+GK+L + G TKEVIP +
Sbjct: 828  QFAVKNN-EVYLIEVNPRAARTVPFVSKATGVPLAKVAARVMAGKTLAEQGVTKEVIPPY 886

Query: 987  VSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVFL 1046
             SVKE VLPF KF G D LLGPEMRSTGEVMG+  +F  AFAKAQ+ +   +   G   L
Sbjct: 887  YSVKEVVLPFNKFPGVDPLLGPEMRSTGEVMGVGRTFAEAFAKAQLGSNSTMKKHGRALL 946

Query: 1047 SLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVAN 1106
            S+ +  K  +  +A   L  GF++ +T GTA  L   GI    V K+HEGRPH  D + N
Sbjct: 947  SVREGDKERVVDLAAKLLKQGFELDATHGTAIVLGEAGINPRLVNKVHEGRPHIQDRIKN 1006

Query: 1107 GQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRS 1156
            G+   ++ T+SG    + D   +RR  L YKV   TT++G  A A A+ +
Sbjct: 1007 GEYTYIINTTSGRRAIE-DSRVIRRSALQYKVHYDTTLNGGFATAMALNA 1055


>gi|422971567|ref|ZP_16974842.1| carbamoyl-phosphate synthase large chain [Escherichia coli TA124]
 gi|371598643|gb|EHN87440.1| carbamoyl-phosphate synthase large chain [Escherichia coli TA124]
          Length = 1072

 Score = 1229 bits (3180), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 618/1070 (57%), Positives = 780/1070 (72%), Gaps = 18/1070 (1%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILILGAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  E+V +++EKERPDA+LPTMGGQTALN A+ L   G LE++GV +IGA  DA
Sbjct: 63   ATYIEPIHWEVVRKIIEKERPDAVLPTMGGQTALNCALELERQGVLEEFGVTMIGATADA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  F  AMK IG++T  SGI +T++E +++A ++G FP IIRP+FT+GG+GGGI
Sbjct: 123  IDKAEDRRRFDVAMKKIGLETARSGIAHTMEEALAVAADVG-FPCIIRPSFTMGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEFE IC  GL  S T ++L+++SL+GWKEYE+EV+RD  DN +I+CSIEN D MG
Sbjct: 182  AYNREEFEEICARGLDLSPTKELLIDESLIGWKEYEMEVVRDKNDNCIIVCSIENFDAMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            +HTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGVE GGSNVQFAVNP +G ++VIEMN
Sbjct: 242  IHTGDSITVAPAQTLTDKEYQIMRNASMAVLREIGVETGGSNVQFAVNPKNGRLIVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT  +TPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGYTLDELMNDITGGRTPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            F FEKF G+   LTTQMKSVGE MA+GRT QES QKALR LE G +G+      +     
Sbjct: 362  FNFEKFAGANDRLTTQMKSVGEVMAIGRTQQESLQKALRGLEVGATGFDPKVSLDDPEAL 421

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
             +++  L+    +R+  I  A + G+ VD +  L+ ID+WFL Q +EL+ +E+ +    +
Sbjct: 422  TKIRRELKDAGAERIWYIADAFRAGLSVDGVFNLTNIDRWFLVQIEELVRLEEKVAEVGI 481

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
            + +  D   ++KR+GF+D ++A      E E+R+ R    + P YKRVDTCAAEF  +T 
Sbjct: 482  TGLNADFLRQLKRKGFADARLAKLAGVREAEIRKLRDQYDLHPVYKRVDTCAAEFATDTA 541

Query: 627  YMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSN 686
            YMYS+Y+ ECES P+ + K+++LGGGPNRIGQGIEFDYCC H S +L+  GYETIM+N N
Sbjct: 542  YMYSTYEEECESNPSDRDKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVNCN 601

Query: 687  PETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHR 746
            PETVSTDYDTSDRLYFEP+T+EDVL ++ +E+P+G+IVQ+GGQTPLKL+          R
Sbjct: 602  PETVSTDYDTSDRLYFEPVTLEDVLEIVRIEKPKGVIVQYGGQTPLKLA----------R 651

Query: 747  LPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEIG 806
               A+G   V + GTSPD+ID AEDRERF   +  L ++QP      +   A+  AKEIG
Sbjct: 652  ALEAAG---VPVIGTSPDAIDRAEDRERFQHAVDRLKLKQPANATVTTIEMAVEKAKEIG 708

Query: 807  YPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALAD 866
            YP+VVRPSYVLGGRAMEIVY +  L  Y + AV V  + PVL+D +L DA+E+DVDA+ D
Sbjct: 709  YPLVVRPSYVLGGRAMEIVYDEADLRRYFQTAVSVSNDAPVLLDHFLDDAVEVDVDAICD 768

Query: 867  SCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNC 926
                V+IGGIMEHIEQAGVHSGDSAC +P  T+S    D +     KLA  L V GLMN 
Sbjct: 769  G-EMVLIGGIMEHIEQAGVHSGDSACSLPAYTLSQEIQDVMRQQVQKLAFELQVRGLMNV 827

Query: 927  QYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPKH 986
            Q+A+  + +VYL+E NPRA+RTVPFVSKA G PLAK AA VM+GKSL + G TKEVIP +
Sbjct: 828  QFAVKNN-EVYLIEVNPRAARTVPFVSKATGVPLAKVAARVMAGKSLAEQGVTKEVIPPY 886

Query: 987  VSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVFL 1046
             SVKE VLPF KF G D LLGPEMRSTGEVMG+  +F  AFAKAQ+ +   +   G   L
Sbjct: 887  YSVKEVVLPFNKFPGVDPLLGPEMRSTGEVMGVGRTFAEAFAKAQLGSNSTMKKHGRALL 946

Query: 1047 SLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVAN 1106
            S+ +  K  +  +A   L  GF++ +T GTA  L   GI    V K+HEGRPH  D + N
Sbjct: 947  SVREGDKERVVDLAAKLLKQGFELDATHGTAIVLGEAGINPRLVNKVHEGRPHIQDRIKN 1006

Query: 1107 GQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRS 1156
            G+   ++ T+SG    + D   +RR  L YKV   TT++G  A A A+ +
Sbjct: 1007 GEYTYIINTTSGRRAIE-DSRVIRRSALQYKVHYDTTLNGGFATAMALNA 1055


>gi|254507846|ref|ZP_05119976.1| carbamoyl-phosphate synthase, large subunit [Vibrio parahaemolyticus
            16]
 gi|219549219|gb|EED26214.1| carbamoyl-phosphate synthase, large subunit [Vibrio parahaemolyticus
            16]
          Length = 1077

 Score = 1229 bits (3180), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 615/1065 (57%), Positives = 779/1065 (73%), Gaps = 22/1065 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTDL+ ILILGAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDLKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPDMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  E+V +++EKERPDA+LPTMGGQTALN A+ L + G L ++GVE+IGA  DA
Sbjct: 63   ATYIEPIQWEVVRKIIEKERPDAVLPTMGGQTALNCALDLEKHGVLAEFGVEMIGATADA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  F +AMK+IG++ P +    T++E  ++ + +G FP IIRP+FT+GGTGGGI
Sbjct: 123  IDKAEDRSRFDKAMKSIGLECPRADTAKTMEEAYAVLDMVG-FPCIIRPSFTMGGTGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYNKEEFE IC+ GL  S T+++L+++SL+GWKEYE+EV+RD ADN +I+CSIEN DPMG
Sbjct: 182  AYNKEEFEEICRRGLDLSPTNELLIDESLIGWKEYEMEVVRDKADNCIIVCSIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            +HTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGVE GGSNVQF +NP DG +++IEMN
Sbjct: 242  IHTGDSITVAPAQTLTDKEYQLMRNASLAVLREIGVETGGSNVQFGINPKDGRMVIIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VG++LD++ NDIT   TPASFEP+IDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKIAAKLAVGFTLDELQNDITGGATPASFEPTIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWD- 505
            F FEKF G+   LTTQMKSVGE MA+GR  QES QKALR LE G +G+    + +LD   
Sbjct: 362  FNFEKFAGANDRLTTQMKSVGEVMAIGRNQQESLQKALRGLEVGVNGF--DEMVDLDAPD 419

Query: 506  -WEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQ 564
                +++ L+    +R+  I  A + GM V+ +  L+ ID+WFL Q +EL+++E  +   
Sbjct: 420  ALTTIRHELKEAGAERIWYIADAFRAGMSVEGVFNLTAIDRWFLVQIEELVNLENEVKAG 479

Query: 565  SVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEAN 624
              + +T+D   ++KR+GFSD +++     +E E+R  R    + P YKRVDTCAAEF ++
Sbjct: 480  GFAGLTQDVLRKMKRKGFSDARLSTILGVSESEIRRLRDQYDIHPVYKRVDTCAAEFSSD 539

Query: 625  TPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMN 684
            T YMYSSYD ECE+ PT K K+++LGGGPNRIGQGIEFDYCC H S +L+  GYETIM+N
Sbjct: 540  TAYMYSSYDEECEAQPTDKDKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVN 599

Query: 685  SNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDE 744
             NPETVSTDYDTSDRLYFEP+T+EDVL+++ +E+P+G+IVQ+GGQTPLKL+         
Sbjct: 600  CNPETVSTDYDTSDRLYFEPVTLEDVLSIVRVEKPKGVIVQYGGQTPLKLA--------- 650

Query: 745  HRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKE 804
             R   A+G   V I GTSPD+ID AEDRERF   +  L + QP+     +   A+  +KE
Sbjct: 651  -RALEAAG---VPIIGTSPDAIDRAEDRERFQVAVDRLGLLQPENATVTTLEQAVEKSKE 706

Query: 805  IGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDAL 864
            IG+P+VVRPSYVLGGRAMEIVY ++ L  Y   AV V  E PVL+D +L DA+E+D+DA+
Sbjct: 707  IGFPLVVRPSYVLGGRAMEIVYDEQDLRRYFNEAVSVSNESPVLLDSFLDDAVEVDIDAI 766

Query: 865  ADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLM 924
             D    VVIGGIMEHIEQAGVHSGDSAC +P  T+S    D +     KLA  L V GLM
Sbjct: 767  CDG-ERVVIGGIMEHIEQAGVHSGDSACSLPAYTLSQEIQDVMREQVEKLAFELGVRGLM 825

Query: 925  NCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIP 984
            N Q+A+  +  VYL+E NPRA+RTVPFVSKA G PLAK AA VM+G+SL   GFTKE+IP
Sbjct: 826  NTQFAVKNN-KVYLIEVNPRAARTVPFVSKATGAPLAKIAARVMAGQSLESQGFTKEIIP 884

Query: 985  KHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTV 1044
             + SVKE VLPF KF G D LLGPEMRSTGEVMG+  +F  A+AKA++  G   P  G  
Sbjct: 885  PYYSVKEVVLPFNKFPGVDPLLGPEMRSTGEVMGVGATFAEAYAKAELGCGAVYPEGGRA 944

Query: 1045 FLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMV 1104
             LS+ +  K  +  +A     +G+++ +T GTA  L   GI    V K+HEGRPH  D +
Sbjct: 945  LLSVREGDKQRVVDLASKLTKLGYQLDATHGTAVILGEAGINPRLVNKVHEGRPHILDRI 1004

Query: 1105 ANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALA 1149
             N +   +V T++G    + D   LRR  LA KV   TT++ A A
Sbjct: 1005 KNNEYTYIVNTAAGRQAIE-DSKVLRRGALAEKVNYTTTLNAAFA 1048



 Score =  252 bits (643), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 163/429 (37%), Positives = 246/429 (57%), Gaps = 26/429 (6%)

Query: 67  KIDS-SAELSNGAA---SSKDQKL-GKRTDLRKILILGAGPIVIGQACEFDYSGTQACKA 121
           ++D+ +AE S+  A   SS D++   + TD  KI++LG GP  IGQ  EFDY    A  A
Sbjct: 528 RVDTCAAEFSSDTAYMYSSYDEECEAQPTDKDKIMVLGGGPNRIGQGIEFDYCCVHASLA 587

Query: 122 LKEEGYEVILINSNPATIMTDPGLADRTYITPMTPELVEQVLEKERPDALLPTMGGQTAL 181
           L+E+GYE I++N NP T+ TD   +DR Y  P+T E V  ++  E+P  ++   GGQT L
Sbjct: 588 LREDGYETIMVNCNPETVSTDYDTSDRLYFEPVTLEDVLSIVRVEKPKGVIVQYGGQTPL 647

Query: 182 NLAVALAESGALEKYGVELIGAKLDAIKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECI 241
            LA       ALE  GV +IG   DAI +AEDR+ F+ A+  +G+  P +    TL++ +
Sbjct: 648 KLA------RALEAAGVPIIGTSPDAIDRAEDRERFQVAVDRLGLLQPENATVTTLEQAV 701

Query: 242 SIANEIGEFPLIIRPAFTLGGTGGGIAYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKE 301
             + EIG FPL++RP++ LGG    I Y++++        ++ S  S VL++  L    E
Sbjct: 702 EKSKEIG-FPLVVRPSYVLGGRAMEIVYDEQDLRRYFNEAVSVSNESPVLLDSFLDDAVE 760

Query: 302 YELEVMRDLADNVVIICSIENVDPMGVHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREI 361
            +++ + D  + VVI   +E+++  GVH+GDS    PA TL+ +    +R+    +  E+
Sbjct: 761 VDIDAICD-GERVVIGGIMEHIEQAGVHSGDSACSLPAYTLSQEIQDVMREQVEKLAFEL 819

Query: 362 GVECGGSNVQFAVNPVDGEVMVIEMNPRVSRSSALASKATGFPIAKMAAKLSVGYSLDQI 421
           GV  G  N QFAV   + +V +IE+NPR +R+    SKATG P+AK+AA++  G SL+  
Sbjct: 820 GVR-GLMNTQFAVK--NNKVYLIEVNPRAARTVPFVSKATGAPLAKIAARVMAGQSLES- 875

Query: 422 PNDITKKTPASFEPSIDYVVTKIPRFAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQ 481
               TK+    +     Y V ++    F KFPG +PLL  +M+S GE M +G TF E++ 
Sbjct: 876 -QGFTKEIIPPY-----YSVKEVV-LPFNKFPGVDPLLGPEMRSTGEVMGVGATFAEAYA 928

Query: 482 KALRSLECG 490
           KA   L CG
Sbjct: 929 KA--ELGCG 935


>gi|323491018|ref|ZP_08096210.1| carbamoyl phosphate synthase large subunit [Vibrio brasiliensis LMG
            20546]
 gi|323314682|gb|EGA67754.1| carbamoyl phosphate synthase large subunit [Vibrio brasiliensis LMG
            20546]
          Length = 1076

 Score = 1229 bits (3180), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 616/1065 (57%), Positives = 780/1065 (73%), Gaps = 22/1065 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTDL+ ILILGAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDLKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPDMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  E+V +++EKERPDA+LPTMGGQTALN A+ L + G L ++GVE+IGA  DA
Sbjct: 63   ATYIEPIQWEVVRKIIEKERPDAVLPTMGGQTALNCALDLEKHGVLAEFGVEMIGATADA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  F +AMK+IG++ P +    +++E   + + +G FP IIRP+FT+GGTGGGI
Sbjct: 123  IDKAEDRSRFDKAMKSIGLECPRADTAKSMEEAYGVLDMVG-FPCIIRPSFTMGGTGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYNKEEFE IC+ GL  S T+++L+++SL+GWKEYE+EV+RD ADN +I+CSIEN DPMG
Sbjct: 182  AYNKEEFEEICRRGLDLSPTNELLIDESLIGWKEYEMEVVRDKADNCIIVCSIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            +HTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGVE GGSNVQF +NP DG +++IEMN
Sbjct: 242  IHTGDSITVAPAQTLTDKEYQLMRNASLAVLREIGVETGGSNVQFGINPKDGRMVIIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VG++LD++ NDIT   TPASFEP+IDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKIAAKLAVGFTLDELQNDITGGATPASFEPTIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWD- 505
            F FEKF G+   LTTQMKSVGE MA+GR  QES QKALR LE G +G+    + +LD   
Sbjct: 362  FNFEKFAGANDRLTTQMKSVGEVMAIGRNQQESLQKALRGLEVGANGF--DEMVDLDAPD 419

Query: 506  -WEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQ 564
                +++ L+    +R+  I  A + GM VD +  L+ ID+WFL Q +EL+++E  +   
Sbjct: 420  ALTTIRHELKEAGAERIWYIADAFRAGMSVDGVFNLTAIDRWFLVQIEELVNLENQVKAG 479

Query: 565  SVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEAN 624
              + +T+D   ++KR+GFSD +++     +E E+R  R    + P YKRVDTCAAEF ++
Sbjct: 480  GFAGLTEDVLRKMKRKGFSDARLSSILGVSENEIRRLRDQYDIHPVYKRVDTCAAEFSSD 539

Query: 625  TPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMN 684
            T YMYSSYD ECE+ PT K K+++LGGGPNRIGQGIEFDYCC H S +L+  GYETIM+N
Sbjct: 540  TAYMYSSYDEECEAQPTDKDKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVN 599

Query: 685  SNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDE 744
             NPETVSTDYDTSDRLYFEP+T+EDVL+++ +E+P+G+IVQ+GGQTPLKL+         
Sbjct: 600  CNPETVSTDYDTSDRLYFEPVTLEDVLSIVRVEKPKGVIVQYGGQTPLKLA--------- 650

Query: 745  HRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKE 804
             R   A+G   V I GTSPD+ID AEDRERF A +  L + QP+     +   A+  +KE
Sbjct: 651  -RALEAAG---VPIIGTSPDAIDRAEDRERFQAAVDRLGLLQPENATVTTIEQAVEKSKE 706

Query: 805  IGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDAL 864
            IG+P+VVRPSYVLGGRAMEIVY ++ L  Y   AV V  E PVL+D++L DA E+D+DA+
Sbjct: 707  IGFPLVVRPSYVLGGRAMEIVYDEQDLRRYFNEAVSVSNESPVLLDRFLDDATEVDIDAI 766

Query: 865  ADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLM 924
             D    VVIGGIMEHIEQAGVHSGDSAC +P  T+S    D +     KLA  L V GLM
Sbjct: 767  CDG-ERVVIGGIMEHIEQAGVHSGDSACSLPAYTLSQEIQDKMREQVEKLAFELGVRGLM 825

Query: 925  NCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIP 984
            N Q+A+  + +VYL+E NPRA+RTVPFVSKA G PLAK AA VM+G+SL   GFTKE+IP
Sbjct: 826  NTQFAVKDN-EVYLIEVNPRAARTVPFVSKATGAPLAKIAARVMAGQSLESQGFTKEIIP 884

Query: 985  KHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTV 1044
             + SVKE VLPF KF G D LLGPEMRSTGEVMG+  +F  A+AKA++  G   P  G  
Sbjct: 885  PYYSVKEVVLPFNKFPGVDPLLGPEMRSTGEVMGVGATFAEAYAKAELGCGAVYPEGGRA 944

Query: 1045 FLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMV 1104
             LS+ +  K  +  +A     +G+++ +T GTA  L   GI    V K+HEGRPH  D +
Sbjct: 945  LLSVREGDKQRVVDLASKLTKLGYQLDATHGTAVILGEAGINPRLVNKVHEGRPHILDRI 1004

Query: 1105 ANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALA 1149
             N +   +V T++G    + D   LRR  LA KV   TT++ A A
Sbjct: 1005 KNNEYTYIVNTAAGRQAIE-DSKVLRRGALAEKVNYTTTLNAAFA 1048



 Score =  258 bits (660), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 164/429 (38%), Positives = 248/429 (57%), Gaps = 26/429 (6%)

Query: 67  KIDS-SAELSNGAA---SSKDQKL-GKRTDLRKILILGAGPIVIGQACEFDYSGTQACKA 121
           ++D+ +AE S+  A   SS D++   + TD  KI++LG GP  IGQ  EFDY    A  A
Sbjct: 528 RVDTCAAEFSSDTAYMYSSYDEECEAQPTDKDKIMVLGGGPNRIGQGIEFDYCCVHASLA 587

Query: 122 LKEEGYEVILINSNPATIMTDPGLADRTYITPMTPELVEQVLEKERPDALLPTMGGQTAL 181
           L+E+GYE I++N NP T+ TD   +DR Y  P+T E V  ++  E+P  ++   GGQT L
Sbjct: 588 LREDGYETIMVNCNPETVSTDYDTSDRLYFEPVTLEDVLSIVRVEKPKGVIVQYGGQTPL 647

Query: 182 NLAVALAESGALEKYGVELIGAKLDAIKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECI 241
            LA       ALE  GV +IG   DAI +AEDR+ F+ A+  +G+  P +    T+++ +
Sbjct: 648 KLA------RALEAAGVPIIGTSPDAIDRAEDRERFQAAVDRLGLLQPENATVTTIEQAV 701

Query: 242 SIANEIGEFPLIIRPAFTLGGTGGGIAYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKE 301
             + EIG FPL++RP++ LGG    I Y++++        ++ S  S VL+++ L    E
Sbjct: 702 EKSKEIG-FPLVVRPSYVLGGRAMEIVYDEQDLRRYFNEAVSVSNESPVLLDRFLDDATE 760

Query: 302 YELEVMRDLADNVVIICSIENVDPMGVHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREI 361
            +++ + D  + VVI   +E+++  GVH+GDS    PA TL+ +   ++R+    +  E+
Sbjct: 761 VDIDAICD-GERVVIGGIMEHIEQAGVHSGDSACSLPAYTLSQEIQDKMREQVEKLAFEL 819

Query: 362 GVECGGSNVQFAVNPVDGEVMVIEMNPRVSRSSALASKATGFPIAKMAAKLSVGYSLDQI 421
           GV  G  N QFAV   D EV +IE+NPR +R+    SKATG P+AK+AA++  G SL+  
Sbjct: 820 GVR-GLMNTQFAVK--DNEVYLIEVNPRAARTVPFVSKATGAPLAKIAARVMAGQSLES- 875

Query: 422 PNDITKKTPASFEPSIDYVVTKIPRFAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQ 481
               TK+    +     Y V ++    F KFPG +PLL  +M+S GE M +G TF E++ 
Sbjct: 876 -QGFTKEIIPPY-----YSVKEVV-LPFNKFPGVDPLLGPEMRSTGEVMGVGATFAEAYA 928

Query: 482 KALRSLECG 490
           KA   L CG
Sbjct: 929 KA--ELGCG 935


>gi|417142766|ref|ZP_11985147.1| carbamoyl-phosphate synthase, large subunit [Escherichia coli
            97.0259]
 gi|417306556|ref|ZP_12093447.1| Carbamoyl-phosphate synthase large chain [Escherichia coli PCN033]
 gi|338771866|gb|EGP26595.1| Carbamoyl-phosphate synthase large chain [Escherichia coli PCN033]
 gi|386154791|gb|EIH11149.1| carbamoyl-phosphate synthase, large subunit [Escherichia coli
            97.0259]
          Length = 1072

 Score = 1229 bits (3180), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 617/1070 (57%), Positives = 781/1070 (72%), Gaps = 18/1070 (1%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILILGAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  E+V +++EKERPDA+LPTMGGQTALN A+ L   G LE++GV +IGA  DA
Sbjct: 63   ATYIEPIHWEVVRKIIEKERPDAVLPTMGGQTALNCALELERQGVLEEFGVTMIGATADA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  F  AMK IG++T  SGI +T++E +++A ++G FP IIRP+FT+GG+GGGI
Sbjct: 123  IDKAEDRRRFDVAMKKIGLETARSGIAHTMEEALAVAADVG-FPCIIRPSFTMGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEFE IC  GL  S T ++L+++SL+GWKEYE+EV+RD  DN +I+CSIEN D MG
Sbjct: 182  AYNREEFEEICARGLDLSPTKELLIDESLIGWKEYEMEVVRDKNDNCIIVCSIENFDAMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            +HTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGVE GGSNVQFAVNP +G ++VIEMN
Sbjct: 242  IHTGDSITVAPAQTLTDKEYQIMRNASMAVLREIGVETGGSNVQFAVNPKNGRLIVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT  +TPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGYTLDELMNDITGGRTPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            F FEKF G+   LTTQMKSVGE MA+GRT QES QKALR LE G +G+      +     
Sbjct: 362  FNFEKFAGANDRLTTQMKSVGEVMAIGRTQQESLQKALRGLEVGATGFDPKVSLDDPEAL 421

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
             +++  L+    +R+  I  A + G+ VD +  L+ ID+WFL Q +EL+ +E+ +    +
Sbjct: 422  TKIRRELKDAGAERIWYIADAFRAGLSVDGVFNLTNIDRWFLVQIEELVRLEEKVAEVGI 481

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
            + +  D   ++KR+GF+D ++A      E E+R+ R    + P YKRVDTCAAEF  +T 
Sbjct: 482  TGLNADFLRQLKRKGFADARLAKLAGVREAEIRKLRDQYDLHPVYKRVDTCAAEFATDTA 541

Query: 627  YMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSN 686
            YMYS+Y+ ECES P+ + K+++LGGGPNRIGQGIEFDYCC H S +L+  GYETIM+N N
Sbjct: 542  YMYSTYEEECESNPSDRDKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVNCN 601

Query: 687  PETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHR 746
            PETVSTDYDTSDRLYFEP+T+EDVL ++ +E+P+G+IVQ+GGQTPLKL+          R
Sbjct: 602  PETVSTDYDTSDRLYFEPVTLEDVLEIVRIEKPKGVIVQYGGQTPLKLA----------R 651

Query: 747  LPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEIG 806
               A+G   V + GTSPD+ID AEDRERF   ++ L ++QP      +   A+  AKEIG
Sbjct: 652  ALEAAG---VPVIGTSPDAIDRAEDRERFQHAVERLKLKQPANATVTTIEMAVEKAKEIG 708

Query: 807  YPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALAD 866
            YP+VVRPSYVLGGRAMEIVY +  L  Y + AV V  + PVL+D +L DA+E+DVDA+ D
Sbjct: 709  YPLVVRPSYVLGGRAMEIVYDEADLRRYFQTAVSVSNDAPVLLDHFLDDAVEVDVDAICD 768

Query: 867  SCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNC 926
                V+IGGIMEHIEQAGVHSGDSAC +P  T+S    D +     KLA  L V GLMN 
Sbjct: 769  G-EMVLIGGIMEHIEQAGVHSGDSACSLPAYTLSQEIQDVMRQQVQKLAFELQVRGLMNV 827

Query: 927  QYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPKH 986
            Q+A+  + +VYL+E NPRA+RTVPFVSKA G PLAK AA VM+GK+L + G TKEVIP +
Sbjct: 828  QFAVKNN-EVYLIEVNPRAARTVPFVSKATGVPLAKVAARVMAGKTLAEQGVTKEVIPPY 886

Query: 987  VSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVFL 1046
             SVKE VLPF KF G D LLGPEMRSTGEVMG+  +F  AFAKAQ+ +   +   G   L
Sbjct: 887  YSVKEVVLPFNKFPGVDPLLGPEMRSTGEVMGVGRTFAEAFAKAQLGSNSTMKKHGRALL 946

Query: 1047 SLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVAN 1106
            S+ +  K  +  +A   L  GF++ +T GTA  L   GI    V K+HEGRPH  D + N
Sbjct: 947  SVREGDKERVVDLAAKLLKQGFELDATHGTAIVLGEAGINPRLVNKVHEGRPHIQDRIKN 1006

Query: 1107 GQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRS 1156
            G+   ++ T+SG    + D   +RR  L YKV   TT++G  A A A+ +
Sbjct: 1007 GEYTYIINTTSGRRAIE-DSRVIRRSALQYKVHYDTTLNGGFATAMALNA 1055


>gi|432791264|ref|ZP_20025361.1| carbamoyl-phosphate synthase large chain [Escherichia coli KTE78]
 gi|432797234|ref|ZP_20031263.1| carbamoyl-phosphate synthase large chain [Escherichia coli KTE79]
 gi|431342932|gb|ELG29902.1| carbamoyl-phosphate synthase large chain [Escherichia coli KTE78]
 gi|431346448|gb|ELG33353.1| carbamoyl-phosphate synthase large chain [Escherichia coli KTE79]
          Length = 1072

 Score = 1229 bits (3179), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 617/1070 (57%), Positives = 781/1070 (72%), Gaps = 18/1070 (1%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILILGAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  E+V +++EKERPDA+LPTMGGQTALN A+ L   G LE++GV +IGA  DA
Sbjct: 63   ATYIEPIHWEVVRKIIEKERPDAVLPTMGGQTALNCALELERQGVLEEFGVTMIGATADA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  F  AMK IG++T  SGI +T++E +++A ++G FP IIRP+FT+GG+GGGI
Sbjct: 123  IDKAEDRRRFDVAMKKIGLETARSGIAHTMEEALAVAADVG-FPCIIRPSFTMGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEFE IC  GL  S T ++L+++SL+GWKEYE+EV+RD  DN +I+CSIEN D MG
Sbjct: 182  AYNREEFEEICARGLDLSPTKELLIDESLIGWKEYEMEVVRDKNDNCIIVCSIENFDAMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            +HTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGVE GGSNVQFAVNP +G ++VIEMN
Sbjct: 242  IHTGDSITVAPAQTLTDKEYQIMRNASMAVLREIGVETGGSNVQFAVNPKNGRLIVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT  +TPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGYTLDELMNDITGGRTPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            F FEKF G+   LTTQMKSVGE MA+GRT QES QKALR LE G +G+      +     
Sbjct: 362  FNFEKFAGANDRLTTQMKSVGEVMAIGRTQQESLQKALRGLEVGATGFDPKVSLDDPEAL 421

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
             +++  L+    +R+  I  A + G+ VD +  L+ ID+WFL Q +EL+ +E+ +    +
Sbjct: 422  TKIRRELKDAGAERIWYIADAFRAGLSVDGVFNLTNIDRWFLVQIEELVRLEEKVAEVGI 481

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
            + +  D   ++KR+GF+D ++A      E E+R+ R    + P YKRVDTCAAEF  +T 
Sbjct: 482  TGLNADFLRQLKRKGFADARLAKLAGVREAEIRKLRDQYDLHPVYKRVDTCAAEFATDTA 541

Query: 627  YMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSN 686
            YMYS+Y+ ECES P+ + K+++LGGGPNRIGQGIEFDYCC H S +L+  GYETIM+N N
Sbjct: 542  YMYSTYEEECESNPSDRDKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVNCN 601

Query: 687  PETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHR 746
            PETVSTDYDTSDRLYFEP+T+EDVL ++ +E+P+G+IVQ+GGQTPLKL+          R
Sbjct: 602  PETVSTDYDTSDRLYFEPVTLEDVLEIVRIEKPKGVIVQYGGQTPLKLA----------R 651

Query: 747  LPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEIG 806
               A+G   V + GTSPD+ID AEDRERF   ++ L ++QP      +   A+  AKEIG
Sbjct: 652  ALEAAG---VPVIGTSPDAIDRAEDRERFQHAVERLKLKQPANATVTAIEMAVEKAKEIG 708

Query: 807  YPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALAD 866
            YP+VVRPSYVLGGRAMEIVY +  L  Y + AV V  + PVL+D +L DA+E+DVDA+ D
Sbjct: 709  YPLVVRPSYVLGGRAMEIVYDEADLRRYFQTAVSVSNDAPVLLDHFLDDAVEVDVDAICD 768

Query: 867  SCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNC 926
                V+IGGIMEHIEQAGVHSGDSAC +P  T+S    D +     KLA  L V GLMN 
Sbjct: 769  G-EMVLIGGIMEHIEQAGVHSGDSACSLPAYTLSQEIQDVMRQQVQKLAFELQVRGLMNV 827

Query: 927  QYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPKH 986
            Q+A+  + +VYL+E NPRA+RTVPFVSKA G PLAK AA VM+GK+L + G TKEVIP +
Sbjct: 828  QFAVKNN-EVYLIEVNPRAARTVPFVSKATGVPLAKVAARVMAGKTLAEQGVTKEVIPPY 886

Query: 987  VSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVFL 1046
             SVKE VLPF KF G D LLGPEMRSTGEVMG+  +F  AFAKAQ+ +   +   G   L
Sbjct: 887  YSVKEVVLPFNKFPGVDPLLGPEMRSTGEVMGVGRTFAEAFAKAQLGSNSTMKKHGRALL 946

Query: 1047 SLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVAN 1106
            S+ +  K  +  +A   L  GF++ +T GTA  L   GI    V K+HEGRPH  D + N
Sbjct: 947  SVREGDKERVVDLAAKLLKQGFELDATHGTAIVLGEAGINPRLVNKVHEGRPHIQDRIKN 1006

Query: 1107 GQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRS 1156
            G+   ++ T+SG    + D   +RR  L YKV   TT++G  A A A+ +
Sbjct: 1007 GEYTYIINTTSGRRAIE-DSRVIRRSALQYKVHYDTTLNGGFATAMALNA 1055


>gi|430747711|ref|YP_007206840.1| carbamoyl-phosphate synthase large subunit [Singulisphaera acidiphila
            DSM 18658]
 gi|430019431|gb|AGA31145.1| carbamoyl-phosphate synthase, large subunit [Singulisphaera
            acidiphila DSM 18658]
          Length = 1077

 Score = 1229 bits (3179), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 619/1089 (56%), Positives = 789/1089 (72%), Gaps = 22/1089 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTDL+ ILI+GAGPIVIGQACEFDYSGTQACKAL+EEGY V+L+NSNPATIMTDP +AD
Sbjct: 3    KRTDLKTILIIGAGPIVIGQACEFDYSGTQACKALREEGYRVVLVNSNPATIMTDPDMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
            RTY+ P+TPE VE+++  ERPDA+LPT+GGQT LN+A+AL +SGAL +Y  +LIGA  +A
Sbjct: 63   RTYVEPITPEFVERIIAAERPDAVLPTLGGQTGLNVALALHDSGALARYDCKLIGATAEA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I+KAEDR LFK  M+ IG+++  SG+ + LDE   I +E+G  P ++RP+FT+GG+GGG+
Sbjct: 123  IRKAEDRQLFKVCMEQIGLESARSGLAHNLDEARGIRDELG-LPCVLRPSFTMGGSGGGV 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN++EF+ +    L  S    VL+E+SL+GWKEYE+EVMRD ADN VIICSIEN+DP+G
Sbjct: 182  AYNRDEFDRMVAYALELSPVHSVLIEESLVGWKEYEMEVMRDEADNAVIICSIENLDPLG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDS+TVAPAQTLTDKEYQR+RD S+AI+REIGVE GGSNVQFA+NP  G ++VIEMN
Sbjct: 242  VHTGDSVTVAPAQTLTDKEYQRMRDASLAILREIGVETGGSNVQFAINPDTGRMVVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRF 447
            PRVSRSSALASKATGFPIAK+AAKL+VGY LD++ NDIT +T A FEPSIDYVVTK+PR+
Sbjct: 302  PRVSRSSALASKATGFPIAKIAAKLAVGYRLDELRNDITGQTCACFEPSIDYVVTKVPRW 361

Query: 448  AFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWD-- 505
            AFEKFP +   LTTQMKSVGE MA+GRTF+ES QKALR LE G  G G         +  
Sbjct: 362  AFEKFPEASTELTTQMKSVGEVMAIGRTFRESLQKALRGLEVGRFGLGADPKDRWGTEDQ 421

Query: 506  --WEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLT 563
               E+++  L  PNP+R+  +  AM  GM +D IHEL+ ID+WFL    EL++ E  L  
Sbjct: 422  PGEEEIQGKLATPNPERLWFLRYAMLAGMSIDRIHELTAIDRWFLVNIAELVETEATLRQ 481

Query: 564  Q-SVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFE 622
              S+    +      KR GFSD+Q+A    S+E EVR +R  LGV   YK VDTCAAEFE
Sbjct: 482  AGSLERAGESLLRLAKRDGFSDRQLAHLWGSSEAEVRRERKRLGVEAVYKLVDTCAAEFE 541

Query: 623  ANTPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIM 682
            A TPY YS+Y+   E+  + K +V++LGGGPNRIGQGIEFDYCCC  +F+L+  GYE +M
Sbjct: 542  ATTPYYYSTYESTDEARVSDKPRVVVLGGGPNRIGQGIEFDYCCCQAAFALRRDGYEVVM 601

Query: 683  MNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYL 742
            +NSNPETVSTDYDTSD L+FEPLT EDVLNV +  +P G+IVQFGGQTPL L+       
Sbjct: 602  VNSNPETVSTDYDTSDSLFFEPLTAEDVLNVCERVKPVGVIVQFGGQTPLNLA------- 654

Query: 743  DEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIA 802
               R   A+G   V I GT+P+SI+ AEDRERF+A+I+ L + QP    A    +A  IA
Sbjct: 655  ---RALEAAG---VPILGTTPESIELAEDRERFHAVIERLGLRQPPSATALKYEEARRIA 708

Query: 803  KEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVD 862
            + IGYPVVVRPS+VLGGR MEIVY +  L  Y+  AVE     P+LIDK+L DA E+DVD
Sbjct: 709  ERIGYPVVVRPSFVLGGRGMEIVYDESALARYMTEAVEASAGHPILIDKFLEDAQEVDVD 768

Query: 863  ALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCG 922
            A++D     ++ G+MEHIE+AG+HSGDSAC IP  ++S++ +  +   T  LA  + V G
Sbjct: 769  AVSDG-ERTIVAGVMEHIEEAGIHSGDSACAIPPFSLSAAVVTELKRQTRLLADAIRVRG 827

Query: 923  LMNCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEV 982
            LMN Q+A+   G+VY+LE NPRASRTVPFVSKA G  LA+ AA VM+G++L + G   + 
Sbjct: 828  LMNIQFAV-KDGEVYVLEVNPRASRTVPFVSKATGLELARAAARVMAGRTLAEQGIESDP 886

Query: 983  IPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSG 1042
             P +VSVKE+V PF KF G D++LGPEMRSTGEVMGI   F  AFAKAQ+AA   LP SG
Sbjct: 887  EPGYVSVKESVFPFAKFAGVDIVLGPEMRSTGEVMGIAPDFAGAFAKAQLAASISLPESG 946

Query: 1043 TVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGD 1102
            TVF+S+    +  +  +A    ++G+ ++ST+GTA  L   GIAV  V K+ EGRP+  D
Sbjct: 947  TVFVSVAARDRQAVLPVAARLSELGYDLMSTAGTAAALTEAGIAVSVVRKIREGRPNLLD 1006

Query: 1103 MVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTV 1162
             +ANG I ++V T SG      +G ++R   +++ VP ITT++G  A   A+  ++   +
Sbjct: 1007 HLANGSIALIVNTPSGKGARTDEG-RIRASAVSHGVPCITTIAGGKAAVAALERMRQGPL 1065

Query: 1163 TMTALQDFF 1171
             + ALQD  
Sbjct: 1066 EVYALQDLL 1074


>gi|331671552|ref|ZP_08372350.1| carbamoyl-phosphate synthase, large subunit [Escherichia coli TA280]
 gi|331071397|gb|EGI42754.1| carbamoyl-phosphate synthase, large subunit [Escherichia coli TA280]
          Length = 1072

 Score = 1229 bits (3179), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 618/1070 (57%), Positives = 780/1070 (72%), Gaps = 18/1070 (1%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILILGAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  E+V +++EKERPDA+LPTMGGQTALN A+ L   G LE++GV +IGA  DA
Sbjct: 63   ATYIEPIHWEVVRKIIEKERPDAVLPTMGGQTALNCALELERQGVLEEFGVTMIGATADA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  F  AMK IG++T  SGI +T++E +++A ++G FP IIRP+FT+GG+GGGI
Sbjct: 123  IDKAEDRRRFDVAMKKIGLETARSGIAHTMEEALAVAADVG-FPCIIRPSFTMGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEFE IC  GL  S T ++L+++SL+GWKEYE+EV+RD  DN +I+CSIEN D MG
Sbjct: 182  AYNREEFEEICARGLDLSPTKELLIDESLIGWKEYEMEVVRDKNDNCIIVCSIENFDAMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            +HTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGVE GGSNVQFAVNP +G ++VIEMN
Sbjct: 242  IHTGDSITVAPAQTLTDKEYQIMRNASMAVLREIGVETGGSNVQFAVNPKNGRLIVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT  +TPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGYTLDELMNDITGGRTPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            F FEKF G+   LTTQMKSVGE MA+GRT QES QKALR LE G +G+      +     
Sbjct: 362  FNFEKFAGANDRLTTQMKSVGEVMAIGRTQQESLQKALRGLEVGATGFDPKVSLDDPEAL 421

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
             +++  L+    +R+  I  A + G+ VD +  L+ ID+WFL Q +EL+ +E+ +    +
Sbjct: 422  TKIRRELKDAGAERIWYIADAFRAGLSVDGVFNLTNIDRWFLVQIEELVRLEEKVAEVGI 481

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
            + +  D   ++KR+GF+D ++A      E E+R+ R    + P YKRVDTCAAEF  +T 
Sbjct: 482  TGLDADFLRQLKRKGFADARLAKLAGVREAEIRKLRDQYDLHPVYKRVDTCAAEFATDTA 541

Query: 627  YMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSN 686
            YMYS+Y+ ECES P+ + K+++LGGGPNRIGQGIEFDYCC H S +L+  GYETIM+N N
Sbjct: 542  YMYSTYEEECESNPSDRDKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVNCN 601

Query: 687  PETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHR 746
            PETVSTDYDTSDRLYFEP+T+EDVL ++ +E+P+G+IVQ+GGQTPLKL+          R
Sbjct: 602  PETVSTDYDTSDRLYFEPVTLEDVLEIVRIEKPKGVIVQYGGQTPLKLA----------R 651

Query: 747  LPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEIG 806
               A+G   V + GTSPD+ID AEDRERF   +  L ++QP      +   A+  AKEIG
Sbjct: 652  ALEAAG---VPVIGTSPDAIDRAEDRERFQHAVDRLKLKQPANATVTAIEMAVEKAKEIG 708

Query: 807  YPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALAD 866
            YP+VVRPSYVLGGRAMEIVY +  L  Y + AV V  + PVL+D +L DA+E+DVDA+ D
Sbjct: 709  YPLVVRPSYVLGGRAMEIVYDEADLRRYFQTAVSVSNDAPVLLDHFLDDAVEVDVDAICD 768

Query: 867  SCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNC 926
                V+IGGIMEHIEQAGVHSGDSAC +P  T+S    D +     KLA  L V GLMN 
Sbjct: 769  G-EMVLIGGIMEHIEQAGVHSGDSACSLPAYTLSQEIQDVMRQQVQKLAFELQVRGLMNV 827

Query: 927  QYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPKH 986
            Q+A+  + +VYL+E NPRA+RTVPFVSKA G PLAK AA VM+GKSL + G TKEVIP +
Sbjct: 828  QFAVKNN-EVYLIEVNPRAARTVPFVSKATGVPLAKVAARVMAGKSLAEQGVTKEVIPPY 886

Query: 987  VSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVFL 1046
             SVKE VLPF KF G D LLGPEMRSTGEVMG+  +F  AFAKAQ+ +   +   G   L
Sbjct: 887  YSVKEVVLPFNKFPGVDPLLGPEMRSTGEVMGVGRTFAEAFAKAQLGSNSTMKKHGRALL 946

Query: 1047 SLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVAN 1106
            S+ +  K  +  +A   L  GF++ +T GTA  L   GI    V K+HEGRPH  D + N
Sbjct: 947  SVREGDKERVVDLAAKLLKQGFELDATHGTAIVLGEAGINPRLVNKVHEGRPHIQDRIKN 1006

Query: 1107 GQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRS 1156
            G+   ++ T+SG    + D   +RR  L YKV   TT++G  A A A+ +
Sbjct: 1007 GEYTYIINTTSGRRAIE-DSRVIRRSALQYKVHYDTTLNGGFATAMALNA 1055


>gi|52842831|ref|YP_096630.1| carbamoyl phosphate synthase, large subunit [Legionella pneumophila
            subsp. pneumophila str. Philadelphia 1]
 gi|378778520|ref|YP_005186959.1| carbamoyl phosphate synthase, large subunit [Legionella pneumophila
            subsp. pneumophila ATCC 43290]
 gi|52629942|gb|AAU28683.1| carbamoyl phosphate synthase, large subunit [Legionella pneumophila
            subsp. pneumophila str. Philadelphia 1]
 gi|364509336|gb|AEW52860.1| carbamoyl phosphate synthase, large subunit [Legionella pneumophila
            subsp. pneumophila ATCC 43290]
          Length = 1067

 Score = 1229 bits (3179), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 618/1086 (56%), Positives = 790/1086 (72%), Gaps = 25/1086 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILILGAGPIVIGQACEFDYSGTQA +ALKEEGY VIL+NSNPATIMTDP LAD
Sbjct: 3    KRTDIKSILILGAGPIVIGQACEFDYSGTQAVRALKEEGYRVILVNSNPATIMTDPELAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  + V +++E ERPDALLPTMGGQTALN A+ L   G L KY VE+IGA  +A
Sbjct: 63   ATYIEPVQWKEVARIIEIERPDALLPTMGGQTALNCALDLVREGVLAKYSVEMIGATREA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I +AEDR+ F+Q M  IG+  P S I ++L+E I +   +G FP IIRP+FT+GG+GGGI
Sbjct: 123  IDRAEDREKFRQLMIKIGLDMPRSAIAHSLEEAIQVQARLG-FPAIIRPSFTMGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEFE IC  GL  S T ++L+++S+LGWKEYE+EV+RD  DN +I+C+IEN DPMG
Sbjct: 182  AYNREEFEEICIRGLELSPTHELLIDESVLGWKEYEMEVVRDKNDNCIIVCTIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQR+RD +I ++R +GV+ GGSNVQFA+NP DG ++V+EMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQRMRDAAIKVLRAVGVDTGGSNVQFAINPEDGRMLVVEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ N+IT  KTPASFEPSIDYVVTK+PR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGYTLDELKNEITGGKTPASFEPSIDYVVTKVPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            F F+KFP +   LTTQMKSVGE MA+G  FQES QKA+R LE G  G      KE   D 
Sbjct: 362  FNFDKFPQTPDTLTTQMKSVGEVMAIGSNFQESLQKAIRGLEIGRCGLHSLFQKE---DM 418

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
             +L+  LR P PDR+  I  A ++ + ++EIH  S +D WFL Q +EL+ +E+ ++ +++
Sbjct: 419  ARLRGHLREPTPDRLWYIADAFRQNLSLEEIHLESRVDPWFLAQIQELVLLERSIIGKTI 478

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
             ++ K   + +K RGF+D  +A     TE EVR +R+ L ++P YKR+D+CA EF ++T 
Sbjct: 479  RDLDKTALHLMKHRGFADAYLAKLLGCTEAEVRARRVELEILPVYKRIDSCAGEFPSDTA 538

Query: 627  YMYSSYDFECESAP-TQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNS 685
            YMYS Y+  CE+ P + KKK++ILGGGPNRIGQGIEFDYCC H + SL+SAGY+TIM+N 
Sbjct: 539  YMYSCYEGSCEARPESNKKKIMILGGGPNRIGQGIEFDYCCVHAALSLRSAGYQTIMVNC 598

Query: 686  NPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEH 745
            NPETVSTD+DTSDRLYFEP+T+EDVL+++ +E+PEG+IV +GGQTPLKL+          
Sbjct: 599  NPETVSTDFDTSDRLYFEPVTLEDVLSIVAMEQPEGVIVHYGGQTPLKLA---------- 648

Query: 746  RLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEI 805
            R   A+G   V+I GTS D+ID AEDRERF  ++KEL + QP  G  +SEA+A+ +A +I
Sbjct: 649  RDLEANG---VKIIGTSSDAIDMAEDRERFQQMVKELKLHQPDNGTVRSEAEAIELANKI 705

Query: 806  GYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALA 865
            GYP+VVRPSYVLGGRAMEIVY +E L  YL +AVEV  + PVL+DK+L+DAIE+D+DA+ 
Sbjct: 706  GYPLVVRPSYVLGGRAMEIVYQEEDLRYYLSHAVEVSNDSPVLLDKFLNDAIEVDIDAVC 765

Query: 866  DSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMN 925
            D   +V+IG IMEHIEQAG+HSGDSAC +P  ++       +     K+A +L V GL+N
Sbjct: 766  DG-KDVLIGAIMEHIEQAGIHSGDSACTLPPFSLGVVVQQDLIEQIRKMALKLGVVGLIN 824

Query: 926  CQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTK-EVIP 984
             Q+AI  + D+Y+LE NPRASRTVPFVSKA G PLAK AAL   G SL D G  +    P
Sbjct: 825  AQFAI-QADDIYVLEVNPRASRTVPFVSKATGLPLAKIAALCKVGISLKDQGLNQNHHTP 883

Query: 985  KHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTV 1044
               S+K  V PF KF G D +LGPEM+STGEVMGI   F  A+AKAQ+ AG  +      
Sbjct: 884  SFYSIKLPVFPFIKFSGVDSILGPEMKSTGEVMGIAKRFGQAYAKAQLGAGCHIAKRRRA 943

Query: 1045 FLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMV 1104
            F+S+ D  K  +  IAK  +++GF+I++T GTA  L+  G+   RV K+ EGRPH  D +
Sbjct: 944  FVSVRDADKTRVGEIAKRLIELGFEIIATRGTALALQAAGVDCRRVFKVAEGRPHVLDFI 1003

Query: 1105 ANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTVTM 1164
             N +I  +V T+ G      D   +RR  L +KV   TT+SGA A   A++     TVT 
Sbjct: 1004 KNNEIDFIVNTTEGKQAIA-DSFAIRRNALQHKVSYTTTLSGAEAACLAMKYEDRETVTR 1062

Query: 1165 TALQDF 1170
              LQD 
Sbjct: 1063 --LQDL 1066


>gi|300948636|ref|ZP_07162720.1| carbamoyl-phosphate synthase, large subunit [Escherichia coli MS
            116-1]
 gi|300956962|ref|ZP_07169214.1| carbamoyl-phosphate synthase, large subunit [Escherichia coli MS
            175-1]
 gi|301024778|ref|ZP_07188416.1| carbamoyl-phosphate synthase, large subunit [Escherichia coli MS
            196-1]
 gi|331650924|ref|ZP_08351952.1| carbamoyl-phosphate synthase, large subunit [Escherichia coli M718]
 gi|417293580|ref|ZP_12080859.1| carbamoyl-phosphate synthase, large subunit [Escherichia coli B41]
 gi|417616367|ref|ZP_12266807.1| carbamoyl-phosphate synthase large chain [Escherichia coli G58-1]
 gi|419937990|ref|ZP_14454835.1| carbamoyl phosphate synthase large subunit [Escherichia coli 75]
 gi|422773046|ref|ZP_16826732.1| carbamoyl-phosphate synthase [Escherichia coli E482]
 gi|423700819|ref|ZP_17675278.1| carbamoyl-phosphate synthase large chain [Escherichia coli H730]
 gi|432561957|ref|ZP_19798590.1| carbamoyl-phosphate synthase large chain [Escherichia coli KTE51]
 gi|432735500|ref|ZP_19970292.1| carbamoyl-phosphate synthase large chain [Escherichia coli KTE42]
 gi|433046063|ref|ZP_20233508.1| carbamoyl-phosphate synthase large chain [Escherichia coli KTE120]
 gi|442594152|ref|ZP_21012075.1| Carbamoyl-phosphate synthase large chain [Escherichia coli
            O10:K5(L):H4 str. ATCC 23506]
 gi|299880268|gb|EFI88479.1| carbamoyl-phosphate synthase, large subunit [Escherichia coli MS
            196-1]
 gi|300316252|gb|EFJ66036.1| carbamoyl-phosphate synthase, large subunit [Escherichia coli MS
            175-1]
 gi|300451862|gb|EFK15482.1| carbamoyl-phosphate synthase, large subunit [Escherichia coli MS
            116-1]
 gi|323939747|gb|EGB35949.1| carbamoyl-phosphate synthase [Escherichia coli E482]
 gi|331051378|gb|EGI23427.1| carbamoyl-phosphate synthase, large subunit [Escherichia coli M718]
 gi|345384116|gb|EGX13985.1| carbamoyl-phosphate synthase large chain [Escherichia coli G58-1]
 gi|385713740|gb|EIG50669.1| carbamoyl-phosphate synthase large chain [Escherichia coli H730]
 gi|386251768|gb|EIJ01460.1| carbamoyl-phosphate synthase, large subunit [Escherichia coli B41]
 gi|388411283|gb|EIL71467.1| carbamoyl phosphate synthase large subunit [Escherichia coli 75]
 gi|431100920|gb|ELE05889.1| carbamoyl-phosphate synthase large chain [Escherichia coli KTE51]
 gi|431287771|gb|ELF78557.1| carbamoyl-phosphate synthase large chain [Escherichia coli KTE42]
 gi|431574363|gb|ELI47144.1| carbamoyl-phosphate synthase large chain [Escherichia coli KTE120]
 gi|441605977|emb|CCP97355.1| Carbamoyl-phosphate synthase large chain [Escherichia coli
            O10:K5(L):H4 str. ATCC 23506]
          Length = 1072

 Score = 1229 bits (3179), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 617/1070 (57%), Positives = 780/1070 (72%), Gaps = 18/1070 (1%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILILGAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  E+V +++EKERPDA+LPTMGGQTALN A+ L   G LE++GV +IGA  DA
Sbjct: 63   ATYIEPIHWEVVRKIIEKERPDAVLPTMGGQTALNCALELERQGVLEEFGVTMIGATADA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  F  AMK IG++T  SGI ++++E +++A E+G FP IIRP+FT+GG+GGGI
Sbjct: 123  IDKAEDRRRFDVAMKKIGLETARSGIAHSMEEALAVAAEVG-FPCIIRPSFTMGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEFE IC  GL  S T ++L+++SL+GWKEYE+EV+RD  DN +I+CSIEN D MG
Sbjct: 182  AYNREEFEEICARGLDLSPTKELLIDESLIGWKEYEMEVVRDKNDNCIIVCSIENFDAMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            +HTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGVE GGSNVQFAVNP +G ++VIEMN
Sbjct: 242  IHTGDSITVAPAQTLTDKEYQIMRNASMAVLREIGVETGGSNVQFAVNPKNGRLIVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT  +TPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGYTLDELMNDITGGRTPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            F FEKF G+   LTTQMKSVGE MA+GRT QES QKALR LE G +G+      +     
Sbjct: 362  FNFEKFAGANDRLTTQMKSVGEVMAIGRTQQESLQKALRGLEVGATGFDPKVSLDDPEAL 421

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
             +++  L+    +R+  I  A + G+ VD +  L+ ID+WFL Q +EL+ +E+ +    +
Sbjct: 422  TKIRRELKDAGAERIWYIADAFRAGLSVDGVFNLTNIDRWFLVQIEELVRLEEKVAEVGI 481

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
            + +  D   ++KR+GF+D ++A      E E+R+ R    + P YKRVDTCAAEF  +T 
Sbjct: 482  TGLNADFLRQLKRKGFADARLAKLAGVREAEIRKLRDQYDLHPVYKRVDTCAAEFATDTA 541

Query: 627  YMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSN 686
            YMYS+Y+ ECES P+ + K+++LGGGPNRIGQGIEFDYCC H S +L+  GYETIM+N N
Sbjct: 542  YMYSTYEEECESNPSDRDKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVNCN 601

Query: 687  PETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHR 746
            PETVSTDYDTSDRLYFEP+T+EDVL ++ +E+P+G+IVQ+GGQTPLKL+          R
Sbjct: 602  PETVSTDYDTSDRLYFEPVTLEDVLEIVRIEKPKGVIVQYGGQTPLKLA----------R 651

Query: 747  LPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEIG 806
               A+G   V + GTSPD+ID AEDRERF   +  L ++QP      +   A+  AKEIG
Sbjct: 652  ALEAAG---VPVIGTSPDAIDRAEDRERFQHAVDRLKLKQPANATVTAIEMAVEKAKEIG 708

Query: 807  YPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALAD 866
            YP+VVRPSYVLGGRAMEIVY +  L  Y + AV V  + PVL+D +L DA+E+DVDA+ D
Sbjct: 709  YPLVVRPSYVLGGRAMEIVYDEADLRRYFQTAVSVSNDAPVLLDHFLDDAVEVDVDAICD 768

Query: 867  SCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNC 926
                V+IGGIMEHIEQAGVHSGDSAC +P  T+S    D +     KLA  L V GLMN 
Sbjct: 769  G-EMVLIGGIMEHIEQAGVHSGDSACSLPAYTLSQEIQDVMRQQVQKLAFELQVRGLMNV 827

Query: 927  QYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPKH 986
            Q+A+  + +VYL+E NPRA+RTVPFVSKA G PLAK AA VM+GK+L + G TKEVIP +
Sbjct: 828  QFAVKNN-EVYLIEVNPRAARTVPFVSKATGVPLAKVAARVMAGKTLAEQGVTKEVIPPY 886

Query: 987  VSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVFL 1046
             SVKE VLPF KF G D LLGPEMRSTGEVMG+  +F  AFAKAQ+ +   +   G   L
Sbjct: 887  YSVKEVVLPFNKFPGVDPLLGPEMRSTGEVMGVGRTFAEAFAKAQLGSNSTMKKHGRALL 946

Query: 1047 SLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVAN 1106
            S+ +  K  +  +A   L  GF++ +T GTA  L   GI    V K+HEGRPH  D + N
Sbjct: 947  SVREGDKERVVDLAAKLLKQGFELDATHGTAIVLGEAGINPRLVNKVHEGRPHIQDRIKN 1006

Query: 1107 GQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRS 1156
            G+   ++ T+SG    + D   +RR  L YKV   TT++G  A A A+ +
Sbjct: 1007 GEYTYIINTTSGRRAIE-DSRVIRRSALQYKVHYDTTLNGGFATAMALNA 1055


>gi|168820960|ref|ZP_02832960.1| carbamoyl-phosphate synthase, large subunit [Salmonella enterica
            subsp. enterica serovar Weltevreden str. HI_N05-537]
 gi|197250511|ref|YP_002145050.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Agona str. SL483]
 gi|409248477|ref|YP_006884318.1| carbamoyl-phosphate synthase, large subunit [Salmonella enterica
            subsp. enterica serovar Weltevreden str. 2007-60-3289-1]
 gi|421885076|ref|ZP_16316279.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Senftenberg str. SS209]
 gi|440765678|ref|ZP_20944693.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Agona str. SH11G1113]
 gi|440766190|ref|ZP_20945188.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Agona str. SH08SF124]
 gi|440773282|ref|ZP_20952181.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Agona str. SH10GFN094]
 gi|197214214|gb|ACH51611.1| carbamoyl-phosphate synthase, large subunit [Salmonella enterica
            subsp. enterica serovar Agona str. SL483]
 gi|205342414|gb|EDZ29178.1| carbamoyl-phosphate synthase, large subunit [Salmonella enterica
            subsp. enterica serovar Weltevreden str. HI_N05-537]
 gi|320084305|emb|CBY94098.1| carbamoyl-phosphate synthase, large subunit [Salmonella enterica
            subsp. enterica serovar Weltevreden str. 2007-60-3289-1]
 gi|379985455|emb|CCF88552.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Senftenberg str. SS209]
 gi|436412007|gb|ELP09952.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Agona str. SH11G1113]
 gi|436416738|gb|ELP14641.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Agona str. SH10GFN094]
 gi|436423373|gb|ELP21185.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Agona str. SH08SF124]
          Length = 1075

 Score = 1229 bits (3179), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 618/1078 (57%), Positives = 784/1078 (72%), Gaps = 19/1078 (1%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILILGAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  E+V +++EKERPDA+LPTMGGQTALN A+ L   G LE++GV +IGA  DA
Sbjct: 63   ATYIEPIHWEVVRKIIEKERPDAVLPTMGGQTALNCALELERQGVLEEFGVTMIGATADA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  F  AMK IG+ T  SGI +T++E +++A ++G FP IIRP+FT+GGTGGGI
Sbjct: 123  IDKAEDRRRFDIAMKKIGLDTARSGIAHTMEEALAVAADVG-FPCIIRPSFTMGGTGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEFE IC+ GL  S T+++L+++SL+GWKEYE+EV+RD  DN +I+CSIEN D MG
Sbjct: 182  AYNREEFEEICERGLDLSPTNELLIDESLIGWKEYEMEVVRDKNDNCIIVCSIENFDAMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            +HTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGVE GGSNVQFAVNP +G ++VIEMN
Sbjct: 242  IHTGDSITVAPAQTLTDKEYQIMRNASMAVLREIGVETGGSNVQFAVNPKNGRLIVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT  +TPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGYTLDELMNDITGGRTPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            F FEKF G+   LTTQMKSVGE MA+GRT QES QKALR LE G +G+      +     
Sbjct: 362  FNFEKFAGANDRLTTQMKSVGEVMAIGRTQQESLQKALRGLEVGATGFDPKVSLDDPEAL 421

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
             +++  L+    DR+  I  A + G+ VD +  L+ ID+WFL Q +EL+ +E+ +    +
Sbjct: 422  TKIRRELKDAGADRIWYIADAFRAGLSVDGVFNLTNIDRWFLVQIEELVRLEEKVAEVGI 481

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
            + +  D   ++KR+GF+D ++A      E E+R+ R    + P YKRVDTCAAEF  +T 
Sbjct: 482  TGLNADFLRQLKRKGFADARLAKLAGVREAEIRKLRDQYNLHPVYKRVDTCAAEFATDTA 541

Query: 627  YMYSSYDFECESAPT-QKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNS 685
            YMYS+Y+ ECE+ P+  + K+++LGGGPNRIGQGIEFDYCC H S +L+  GYETIM+N 
Sbjct: 542  YMYSTYEDECEANPSVDRDKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVNC 601

Query: 686  NPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEH 745
            NPETVSTDYDTSDRLYFEP+T+EDVL ++ +E+P+G+IVQ+GGQTPLKL+          
Sbjct: 602  NPETVSTDYDTSDRLYFEPVTLEDVLEIVRIEKPKGVIVQYGGQTPLKLA---------- 651

Query: 746  RLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEI 805
            R   A+G   V + GTSPD+ID AEDRERF   +  L ++QP      +   A+  AKEI
Sbjct: 652  RALEAAG---VPVIGTSPDAIDRAEDRERFQHAVDRLKLKQPANATVTAIEQAVEKAKEI 708

Query: 806  GYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALA 865
            GYP+VVRPSYVLGGRAMEIVY +  L  Y + AV V  + PVL+D++L DA+E+DVDA+ 
Sbjct: 709  GYPLVVRPSYVLGGRAMEIVYDEADLRRYFQTAVSVSNDAPVLLDRFLDDAVEVDVDAIC 768

Query: 866  DSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMN 925
            D    V+IGGIMEHIEQAGVHSGDSAC +P  T+S    D +     KLA  L V GLMN
Sbjct: 769  DG-EMVLIGGIMEHIEQAGVHSGDSACSLPAYTLSQEIQDVMRQQVQKLAFELQVRGLMN 827

Query: 926  CQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPK 985
             Q+A+  + +VYL+E NPRA+RTVPFVSKA G PLAK AA VM+GKSL + G TKE+IP 
Sbjct: 828  VQFAVKDN-EVYLIEVNPRAARTVPFVSKATGVPLAKVAARVMAGKSLTEQGVTKEIIPP 886

Query: 986  HVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVF 1045
            + SVKE VLPF KF G D LLGPEMRSTGEVMG+  +F  AFAKAQ+ +   +   G   
Sbjct: 887  YYSVKEVVLPFNKFPGVDPLLGPEMRSTGEVMGVGRTFAEAFAKAQLGSNSTMKKQGRAL 946

Query: 1046 LSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVA 1105
            LS+ +  K  +  +A   L  GF++ +T GTA  L   GI    V K+HEGRPH  D + 
Sbjct: 947  LSVREGDKERVVDLAAKLLKQGFELDATHGTAIVLGEAGINPRLVNKVHEGRPHIQDRIK 1006

Query: 1106 NGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTVT 1163
            NG+   ++ T++G    + D   +RR  L YKV   TT++G  A   A+ +  +  VT
Sbjct: 1007 NGEYTYIINTTAGRRAIE-DSRVIRRSALQYKVHYDTTLNGGFATTMALNADATEKVT 1063


>gi|54298614|ref|YP_124983.1| carbamoyl-phosphate synthase large subunit [Legionella pneumophila
            str. Paris]
 gi|296108270|ref|YP_003619971.1| carbamoyl-phosphate synthase large subunit [Legionella pneumophila
            2300/99 Alcoy]
 gi|397665215|ref|YP_006506753.1| carbamoyl-phosphate synthase large subunit [Legionella pneumophila
            subsp. pneumophila]
 gi|53752399|emb|CAH13831.1| carbamoyl-phosphate synthase large subunit [Legionella pneumophila
            str. Paris]
 gi|295650172|gb|ADG26019.1| carbamoyl-phosphate synthase large chain [Legionella pneumophila
            2300/99 Alcoy]
 gi|395128626|emb|CCD06844.1| carbamoyl-phosphate synthase large subunit [Legionella pneumophila
            subsp. pneumophila]
          Length = 1067

 Score = 1229 bits (3179), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 618/1086 (56%), Positives = 790/1086 (72%), Gaps = 25/1086 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILILGAGPIVIGQACEFDYSGTQA +ALKEEGY VIL+NSNPATIMTDP LAD
Sbjct: 3    KRTDIKSILILGAGPIVIGQACEFDYSGTQAVRALKEEGYRVILVNSNPATIMTDPELAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  + V +++E ERPDALLPTMGGQTALN A+ L   G L KY VE+IGA  +A
Sbjct: 63   ATYIEPVQWKEVARIIEIERPDALLPTMGGQTALNCALDLVREGVLAKYSVEMIGATREA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I +AEDR+ F+Q M  IG+  P S I ++L+E I +   +G FP IIRP+FT+GG+GGGI
Sbjct: 123  IDRAEDREKFRQLMIKIGLDMPRSAIAHSLEEAIQVQARLG-FPAIIRPSFTMGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEFE IC  GL  S T ++L+++S+LGWKEYE+EV+RD  DN +I+C+IEN DPMG
Sbjct: 182  AYNREEFEEICIRGLELSPTRELLIDESVLGWKEYEMEVVRDKNDNCIIVCTIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQR+RD +I ++R +GV+ GGSNVQFA+NP DG ++V+EMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQRMRDAAIKVLRAVGVDTGGSNVQFAINPEDGRMLVVEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ N+IT  KTPASFEPSIDYVVTK+PR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGYTLDELKNEITGGKTPASFEPSIDYVVTKVPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            F F+KFP +   LTTQMKSVGE MA+G  FQES QKA+R LE G  G      KE   D 
Sbjct: 362  FNFDKFPQTPDTLTTQMKSVGEVMAIGSNFQESLQKAIRGLEIGRCGLHSLFQKE---DM 418

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
             +L+  LR P PDR+  I  A ++ + ++EIH  S +D WFL Q +EL+ +E+ ++ +++
Sbjct: 419  ARLRGHLREPTPDRLWYIADAFRQNLSLEEIHLESRVDPWFLAQIQELVLLERSIIGKTI 478

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
             ++ K   + +K RGF+D  +A     TE EVR +R+ L ++P YKR+D+CA EF ++T 
Sbjct: 479  RDLDKTTLHLMKHRGFADAYLAKLLGCTEAEVRARRVELEILPVYKRIDSCAGEFPSDTA 538

Query: 627  YMYSSYDFECESAP-TQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNS 685
            YMYS Y+  CE+ P + KKK++ILGGGPNRIGQGIEFDYCC H + SL+SAGY+TIM+N 
Sbjct: 539  YMYSCYEGSCEARPESNKKKIMILGGGPNRIGQGIEFDYCCVHAALSLRSAGYQTIMVNC 598

Query: 686  NPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEH 745
            NPETVSTD+DTSDRLYFEP+T+EDVL+++ +E+PEG+IV +GGQTPLKL+          
Sbjct: 599  NPETVSTDFDTSDRLYFEPVTLEDVLSIVAMEQPEGVIVHYGGQTPLKLA---------- 648

Query: 746  RLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEI 805
            R   A+G   V+I GTS D+ID AEDRERF  ++KEL + QP  G  +SEA+A+ +A +I
Sbjct: 649  RDLEANG---VKIIGTSSDAIDMAEDRERFQQMVKELKLHQPDNGTVRSEAEAIELANKI 705

Query: 806  GYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALA 865
            GYP+VVRPSYVLGGRAMEIVY +E L  YL +AVEV  + PVL+DK+L+DAIE+D+DA+ 
Sbjct: 706  GYPLVVRPSYVLGGRAMEIVYQEEDLRYYLSHAVEVSNDSPVLLDKFLNDAIEVDIDAVC 765

Query: 866  DSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMN 925
            D   +V+IG IMEHIEQAG+HSGDSAC +P  ++       +     K+A +L V GL+N
Sbjct: 766  DG-KDVLIGAIMEHIEQAGIHSGDSACTLPPFSLGVVVQQDLIEQIRKMALKLGVVGLIN 824

Query: 926  CQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTK-EVIP 984
             Q+AI  + D+Y+LE NPRASRTVPFVSKA G PLAK AAL   G SL D G  +    P
Sbjct: 825  AQFAI-QADDIYVLEVNPRASRTVPFVSKATGLPLAKIAALCKVGISLKDQGLNQNHHAP 883

Query: 985  KHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTV 1044
               S+K  V PF KF G D +LGPEM+STGEVMGI   F  A+AKAQ+ AG  +      
Sbjct: 884  SFYSIKLPVFPFIKFSGVDSILGPEMKSTGEVMGIAKRFGQAYAKAQLGAGCHIAKRRRA 943

Query: 1045 FLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMV 1104
            F+S+ D  K  +  IAK  +++GF+I++T GTA  L+  G+   RV K+ EGRPH  D +
Sbjct: 944  FVSVRDADKTRVGEIAKRLIELGFEIIATRGTALALQAAGVDCRRVFKVAEGRPHVLDFI 1003

Query: 1105 ANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTVTM 1164
             N +I  +V T+ G      D   +RR  L +KV   TT+SGA A   A++     TVT 
Sbjct: 1004 KNNEIDFIVNTTEGKQAIA-DSFAIRRNALQHKVSYTTTLSGAEAACLAMKYEDRETVTR 1062

Query: 1165 TALQDF 1170
              LQD 
Sbjct: 1063 --LQDL 1066


>gi|298530534|ref|ZP_07017936.1| carbamoyl-phosphate synthase, large subunit [Desulfonatronospira
            thiodismutans ASO3-1]
 gi|298509908|gb|EFI33812.1| carbamoyl-phosphate synthase, large subunit [Desulfonatronospira
            thiodismutans ASO3-1]
          Length = 1079

 Score = 1229 bits (3179), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 630/1091 (57%), Positives = 795/1091 (72%), Gaps = 25/1091 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++KI+++G+GPI+IGQACEFDYSGTQA KALKEEGY+V+L+NSNPATIMTDP LAD
Sbjct: 3    KRTDIKKIMLIGSGPIIIGQACEFDYSGTQALKALKEEGYQVVLVNSNPATIMTDPDLAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
            +TYI P+ P+ V +++ +E+PDALLPT+GGQT LN AVAL+E+G LEKYGVELIGA L  
Sbjct: 63   QTYIEPIEPDTVARIIAREKPDALLPTLGGQTGLNTAVALSENGVLEKYGVELIGASLPV 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I+KAE R+ F++AM+ IG+K P SGI   +DE     + I  FP+IIRPA+TLGGTGGGI
Sbjct: 123  IQKAESREQFRRAMENIGLKVPKSGIARNMDEARQWTSTIA-FPIIIRPAYTLGGTGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN E+ E     GL+ S+T ++++E+S+LGWKE+ELEVMRD  DN VIICSIEN+DPMG
Sbjct: 182  AYNLEDLEEKAAYGLSCSMTHEIMLEESVLGWKEFELEVMRDKNDNCVIICSIENLDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAP+QTLTD+EYQ +R+ S+ I+REIGVE GGSNVQFAVNP DG+++VIEMN
Sbjct: 242  VHTGDSITVAPSQTLTDREYQVMRNASLDIMREIGVETGGSNVQFAVNPDDGDLVVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRF 447
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD+IPNDIT++T ASFEP+IDY V KIPRF
Sbjct: 302  PRVSRSSALASKATGFPIAKIAAKLAVGYTLDEIPNDITRETMASFEPTIDYCVVKIPRF 361

Query: 448  AFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDWE 507
             FEKFPGS+ +L T MKSVGE MA+GRT +E+ QK LRSLE G  G   +++   + D E
Sbjct: 362  TFEKFPGSQDMLGTSMKSVGETMAIGRTCKEALQKGLRSLETGHIGL-TTDLPSGEPDLE 420

Query: 508  QLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQ----FLLT 563
             ++  LR P+  R+ A+Y A    M + E+++L+ ID WFL Q +EL+ +E+    F L 
Sbjct: 421  GIRSRLRFPHSLRLFALYEAFMADMDIQELYDLTSIDPWFLRQIQELVQMEKKLRNFSLE 480

Query: 564  QSVS---NMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAE 620
            QS+S      K    E K  GF D+ +A   K  E  VR  R  LG+ P+Y  VDTCA E
Sbjct: 481  QSLSLDNPYLKPVLTEAKTLGFGDRHLARLWKKDEIFVRTLRCELGIEPTYYLVDTCAGE 540

Query: 621  FEANTPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYET 680
            FEA TPY YS+Y+   E  P   +K++ILGGGPNRIGQGIEFDYCC H ++SL+  G  +
Sbjct: 541  FEAYTPYFYSTYEKGREVFPKNTRKIMILGGGPNRIGQGIEFDYCCVHAAYSLKEMGLGS 600

Query: 681  IMMNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQ 740
            IM+NSNPETVSTDYDTSD LYFEPLT EDV+N+I+ E+PEG+IVQFGGQTPL L++P+ Q
Sbjct: 601  IMVNSNPETVSTDYDTSDFLYFEPLTFEDVMNIIEFEKPEGVIVQFGGQTPLNLAVPLLQ 660

Query: 741  YLDEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALA 800
                           V I GTSPDSID AEDRERF A+I +L + QP  G A+S  +A  
Sbjct: 661  -------------AGVPIIGTSPDSIDRAEDRERFQALIAKLGLMQPANGTARSIEEARI 707

Query: 801  IAKEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEID 860
            IA +IGYPVVVRPSYVLGGRAMEIVY +E L+TY +N V V PE P+L+DK+L  AIE+D
Sbjct: 708  IAADIGYPVVVRPSYVLGGRAMEIVYDEEHLITYFKNHVVVAPEHPILLDKFLEGAIEVD 767

Query: 861  VDALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNV 920
            VDAL+D   +  + GIMEHIE+AGVHSGDSAC+IP  TI    L  I + TI LA+ L+V
Sbjct: 768  VDALSDG-QDTYVAGIMEHIEEAGVHSGDSACVIPPHTIEQDLLREIEAETISLARELSV 826

Query: 921  CGLMNCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTK 980
             GL+N Q+AI   G VY+LE NPRASRTVPFVSKA   PLAK A  VM G+ L DL    
Sbjct: 827  VGLINIQFAI-KEGRVYILEVNPRASRTVPFVSKATSVPLAKLATRVMLGEKLKDLDPWS 885

Query: 981  EVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPL 1040
                 + SVKEAVLPF ++ G DVLLGPEMRSTGEVMGID    +AF K Q+ AGQ LP 
Sbjct: 886  MRKQGYYSVKEAVLPFGRYPGVDVLLGPEMRSTGEVMGIDKGMGLAFMKGQMGAGQMLPE 945

Query: 1041 SGTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHA 1100
             G V +S+ +  K      A+ F ++GF I +T GTA FL+  GI  + V K++EGRP+ 
Sbjct: 946  KGCVCISVTERDKKDCMEPARIFHEMGFSIKATRGTAAFLQDNGIPAQVVNKVYEGRPNI 1005

Query: 1101 GDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSN 1160
             D + N +I +++ TSSG      D   LR+  + Y++P  TT++ A A A AI+     
Sbjct: 1006 IDHIKNKEIDLLINTSSGKKTKH-DSSSLRQAAVLYRIPYTTTMAAARAMASAIKERAGE 1064

Query: 1161 TVTMTALQDFF 1171
             + + ++Q+++
Sbjct: 1065 GLQVQSMQEYY 1075


>gi|433656764|ref|YP_007274143.1| Carbamoyl-phosphate synthase large chain [Vibrio parahaemolyticus
            BB22OP]
 gi|432507452|gb|AGB08969.1| Carbamoyl-phosphate synthase large chain [Vibrio parahaemolyticus
            BB22OP]
          Length = 1077

 Score = 1229 bits (3179), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 614/1065 (57%), Positives = 781/1065 (73%), Gaps = 22/1065 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILILGAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIQSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  E+V +++EKERPDA+LPTMGGQTALN A+ L + G LE++GVE+IGA  DA
Sbjct: 63   ATYIEPIQWEVVRKIIEKERPDAVLPTMGGQTALNCALDLEKHGVLEEFGVEMIGATADA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  F +AMK+IG++ P +    T++E   + + +G FP IIRP+FT+GGTGGGI
Sbjct: 123  IDKAEDRSRFDKAMKSIGLECPRADTAKTMEEAYKVLDMVG-FPCIIRPSFTMGGTGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYNKEEFE IC+ GL  S T+++L+++SL+GWKEYE+EV+RD ADN +I+CSIEN DPMG
Sbjct: 182  AYNKEEFEEICRRGLDLSPTNELLIDESLIGWKEYEMEVVRDKADNCIIVCSIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            +HTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGVE GGSNVQF +NP DG +++IEMN
Sbjct: 242  IHTGDSITVAPAQTLTDKEYQLMRNASLAVLREIGVETGGSNVQFGINPKDGRMVIIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VG++LD++ NDIT   TPASFEP+IDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKIAAKLAVGFTLDELQNDITGGATPASFEPTIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWD- 505
            F FEKF G+   LTTQMKSVGE MA+GR  QES  KALR LE G +G+    + +LD   
Sbjct: 362  FNFEKFAGANDRLTTQMKSVGEVMAIGRNQQESLHKALRGLEVGATGF--DEMVDLDAPD 419

Query: 506  -WEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQ 564
               ++++ L+    +R+  I  A + GM VD +  L+ ID+WFL Q +EL+ +E+ +   
Sbjct: 420  ALTKIRHELKEAGAERIWYIADAFRAGMSVDGVFNLTNIDRWFLVQIEELVKLEEQVKAG 479

Query: 565  SVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEAN 624
              + +T++   ++KR+GFSD +++      E E+R  R    + P YKRVDTCAAEF ++
Sbjct: 480  GFAGLTEEVLRQMKRKGFSDARLSKLLGVAESEIRRLRDQFDIHPVYKRVDTCAAEFSSD 539

Query: 625  TPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMN 684
            T YMYSSYD ECE+ PT K K+++LGGGPNRIGQGIEFDYCC H S +L+  GYETIM+N
Sbjct: 540  TAYMYSSYDEECEANPTDKDKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVN 599

Query: 685  SNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDE 744
             NPETVSTDYDTSDRLYFEP+T+EDVL++  +E+P+G+IVQ+GGQTPLKL+         
Sbjct: 600  CNPETVSTDYDTSDRLYFEPVTLEDVLSIARVEKPKGVIVQYGGQTPLKLA--------- 650

Query: 745  HRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKE 804
             R   A+G   V I GTSPD+ID AEDRERF A ++ L + QP+     +   A+  ++E
Sbjct: 651  -RALEAAG---VPIIGTSPDAIDRAEDRERFQAAVERLGLLQPQNATVTAMEQAVEKSRE 706

Query: 805  IGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDAL 864
            IG+P+VVRPSYVLGGRAMEIVY ++ L  Y   AV V  E PVL+D++L DA E+D+DA+
Sbjct: 707  IGFPLVVRPSYVLGGRAMEIVYDEQDLRRYFNEAVSVSNESPVLLDRFLDDATEVDIDAI 766

Query: 865  ADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLM 924
             D    VVIGGIMEHIEQAGVHSGDSAC +P  T+S    D +     KLA  L V GLM
Sbjct: 767  CDG-ERVVIGGIMEHIEQAGVHSGDSACSLPAYTLSQEIQDKMREQVEKLAFELGVRGLM 825

Query: 925  NCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIP 984
            N Q+A+  + +VYL+E NPRA+RTVPFVSKA G PLAK AA VM+G+SL   GFTKE+IP
Sbjct: 826  NTQFAVKDN-EVYLIEVNPRAARTVPFVSKATGAPLAKIAARVMAGQSLESQGFTKEIIP 884

Query: 985  KHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTV 1044
             + SVKE VLPF KF G D LLGPEMRSTGEVMG+  +F  A+AKA++  G   P  G  
Sbjct: 885  PYYSVKEVVLPFNKFPGVDPLLGPEMRSTGEVMGVGATFAEAYAKAELGCGSVYPEGGRA 944

Query: 1045 FLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMV 1104
             LS+ +  K  +  +A   + +G+++ +T GTA  L   GI    V K+HEGRPH  D +
Sbjct: 945  LLSVREGDKQRVVDLASKLVKLGYQLDATHGTAVILGEAGINPRLVNKVHEGRPHILDRI 1004

Query: 1105 ANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALA 1149
             N +   +V T++G    + D   LRR  LA KV   TT++ A A
Sbjct: 1005 KNNEYTYIVNTAAGRQAIE-DSKVLRRGALAEKVNYTTTLNAAFA 1048



 Score =  256 bits (653), Expect = 6e-65,   Method: Compositional matrix adjust.
 Identities = 163/429 (37%), Positives = 246/429 (57%), Gaps = 26/429 (6%)

Query: 67  KIDS-SAELSNGAA---SSKDQKL-GKRTDLRKILILGAGPIVIGQACEFDYSGTQACKA 121
           ++D+ +AE S+  A   SS D++     TD  KI++LG GP  IGQ  EFDY    A  A
Sbjct: 528 RVDTCAAEFSSDTAYMYSSYDEECEANPTDKDKIMVLGGGPNRIGQGIEFDYCCVHASLA 587

Query: 122 LKEEGYEVILINSNPATIMTDPGLADRTYITPMTPELVEQVLEKERPDALLPTMGGQTAL 181
           L+E+GYE I++N NP T+ TD   +DR Y  P+T E V  +   E+P  ++   GGQT L
Sbjct: 588 LREDGYETIMVNCNPETVSTDYDTSDRLYFEPVTLEDVLSIARVEKPKGVIVQYGGQTPL 647

Query: 182 NLAVALAESGALEKYGVELIGAKLDAIKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECI 241
            LA       ALE  GV +IG   DAI +AEDR+ F+ A++ +G+  P +     +++ +
Sbjct: 648 KLA------RALEAAGVPIIGTSPDAIDRAEDRERFQAAVERLGLLQPQNATVTAMEQAV 701

Query: 242 SIANEIGEFPLIIRPAFTLGGTGGGIAYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKE 301
             + EIG FPL++RP++ LGG    I Y++++        ++ S  S VL+++ L    E
Sbjct: 702 EKSREIG-FPLVVRPSYVLGGRAMEIVYDEQDLRRYFNEAVSVSNESPVLLDRFLDDATE 760

Query: 302 YELEVMRDLADNVVIICSIENVDPMGVHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREI 361
            +++ + D  + VVI   +E+++  GVH+GDS    PA TL+ +   ++R+    +  E+
Sbjct: 761 VDIDAICD-GERVVIGGIMEHIEQAGVHSGDSACSLPAYTLSQEIQDKMREQVEKLAFEL 819

Query: 362 GVECGGSNVQFAVNPVDGEVMVIEMNPRVSRSSALASKATGFPIAKMAAKLSVGYSLDQI 421
           GV  G  N QFAV   D EV +IE+NPR +R+    SKATG P+AK+AA++  G SL+  
Sbjct: 820 GVR-GLMNTQFAVK--DNEVYLIEVNPRAARTVPFVSKATGAPLAKIAARVMAGQSLES- 875

Query: 422 PNDITKKTPASFEPSIDYVVTKIPRFAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQ 481
               TK+    +     Y V ++    F KFPG +PLL  +M+S GE M +G TF E++ 
Sbjct: 876 -QGFTKEIIPPY-----YSVKEVV-LPFNKFPGVDPLLGPEMRSTGEVMGVGATFAEAYA 928

Query: 482 KALRSLECG 490
           KA   L CG
Sbjct: 929 KA--ELGCG 935


>gi|422023888|ref|ZP_16370390.1| carbamoyl phosphate synthase large subunit [Providencia sneebia DSM
            19967]
 gi|414091903|gb|EKT53584.1| carbamoyl phosphate synthase large subunit [Providencia sneebia DSM
            19967]
          Length = 1073

 Score = 1229 bits (3179), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 618/1064 (58%), Positives = 780/1064 (73%), Gaps = 19/1064 (1%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILILGAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  E+V +++EKERPDA+LPTMGGQTALN A+ L   G L ++GV +IGA  DA
Sbjct: 63   ATYIEPIHWEVVRKIIEKERPDAVLPTMGGQTALNCALELERKGVLAEFGVTMIGATADA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  F +AMK IG+ T  SGI +T++E  ++A+++G FP IIRP+FT+GGTGGGI
Sbjct: 123  IDKAEDRQRFDKAMKKIGLDTARSGIAHTMEEAYAVADDVG-FPCIIRPSFTMGGTGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEFE IC  GL  S T+++L+++SL+GWKEYE+E++RD  DN +I+CSIEN D MG
Sbjct: 182  AYNREEFEEICTRGLDLSPTNELLIDESLIGWKEYEMEIVRDKNDNCIIVCSIENFDAMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            +HTGDSITVAPAQTLTDKEYQ +RD S+A++REIGVE GGSNVQF+VNP  G ++VIEMN
Sbjct: 242  IHTGDSITVAPAQTLTDKEYQIMRDASMAVLREIGVETGGSNVQFSVNPKTGRLIVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT  +TPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKIAAKLAVGYTLDELMNDITGGRTPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            F FEKF G+   LTTQMKSVGE MA+GRTFQES QKALR LE G +G+      +     
Sbjct: 362  FNFEKFAGTNDRLTTQMKSVGEVMAIGRTFQESMQKALRGLEVGATGFDPKVSLDDPEAL 421

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
             +++  L+    +R   +  A + G+ VD I  L+ ID+WFL Q +EL+ +E+ ++   +
Sbjct: 422  TRIRRELKEAGAERAWYLADAFRAGLSVDGIFNLTNIDRWFLVQIEELVRLEEQVVELGI 481

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
            + +TKD    +KR+GF+D ++A     +E E+R+ R S  + P YKRVDTCAAEF  +T 
Sbjct: 482  NGLTKDFLRTLKRKGFADARLAKLVGVSETELRKLRQSYDLHPVYKRVDTCAAEFATDTA 541

Query: 627  YMYSSYDFECESAP-TQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNS 685
            YMYS+Y+ ECES P T K K+++LGGGPNRIGQGIEFDYCC H S +L+  GYETIM+N 
Sbjct: 542  YMYSTYEEECESNPNTDKPKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVNC 601

Query: 686  NPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEH 745
            NPETVSTDYDTSDRLYFEP+T+EDVL ++ +E+P+G+IVQ+GGQTPLKL+          
Sbjct: 602  NPETVSTDYDTSDRLYFEPVTLEDVLEIVRIEQPKGVIVQYGGQTPLKLA---------- 651

Query: 746  RLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEI 805
            R   A+G   V I GTSPD+ID AEDRERF   +  L+++QPK     +   A+  A  I
Sbjct: 652  RELEAAG---VPIIGTSPDAIDRAEDRERFQQAVNRLNLKQPKNATVATIEQAVEKAAGI 708

Query: 806  GYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALA 865
            GYP+VVRPSYVLGGRAMEIVY +  L  Y + AV V  + PVL+D++L DA+E+DVDA+ 
Sbjct: 709  GYPLVVRPSYVLGGRAMEIVYDETDLRRYFQTAVSVSNDAPVLLDRFLDDAVEVDVDAIC 768

Query: 866  DSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMN 925
            D    V+IGGIMEHIEQAGVHSGDSAC +P  T+S    D +      LA  L V GLMN
Sbjct: 769  DG-EMVLIGGIMEHIEQAGVHSGDSACSLPAYTLSQEIQDVMREQVRDLAFELRVRGLMN 827

Query: 926  CQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPK 985
             Q+A+  + +VYL+E NPRA+RTVPFVSKA G PLAK AA VM+G+SL + G TKEVIP 
Sbjct: 828  VQFAVKNN-EVYLIEVNPRAARTVPFVSKATGVPLAKVAARVMAGQSLAEQGVTKEVIPP 886

Query: 986  HVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVF 1045
            + SVKE VLPF KFQG D +LGPEMRSTGEVMG+  +F  AFAKA + +   +  +G   
Sbjct: 887  YYSVKEVVLPFNKFQGVDPILGPEMRSTGEVMGVGRTFAEAFAKAMLGSSSTMKKTGRAL 946

Query: 1046 LSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVA 1105
            LS+ +  K  +  +A   L  GF++ +T GTA  L   GI    V K+HEGRPH  D + 
Sbjct: 947  LSVREGDKTRVVDLAAKLLKHGFELDATHGTAIVLGEAGINPRLVNKVHEGRPHIQDRIK 1006

Query: 1106 NGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALA 1149
            NG+   +V T++G    + D   +RR  L YKV   TT++G  A
Sbjct: 1007 NGEYNYIVNTTAGRQAIE-DSKLIRRSALQYKVHYDTTLNGGFA 1049


>gi|28198316|ref|NP_778630.1| carbamoyl phosphate synthase large subunit [Xylella fastidiosa
            Temecula1]
 gi|71276056|ref|ZP_00652337.1| Carbamoyl-phosphate synthase, large subunit, glutamine-dependent
            [Xylella fastidiosa Dixon]
 gi|170729660|ref|YP_001775093.1| carbamoyl phosphate synthase large subunit [Xylella fastidiosa M12]
 gi|182680955|ref|YP_001829115.1| carbamoyl phosphate synthase large subunit [Xylella fastidiosa M23]
 gi|386084476|ref|YP_006000758.1| carbamoyl phosphate synthase large subunit [Xylella fastidiosa subsp.
            fastidiosa GB514]
 gi|417558864|ref|ZP_12209823.1| Carbamoylphosphate synthase large subunit [Xylella fastidiosa EB92.1]
 gi|32129438|sp|Q87EB8.1|CARB_XYLFT RecName: Full=Carbamoyl-phosphate synthase large chain; AltName:
            Full=Carbamoyl-phosphate synthetase ammonia chain
 gi|28056386|gb|AAO28279.1| carbamoyl-phosphate synthase large chain [Xylella fastidiosa
            Temecula1]
 gi|71163139|gb|EAO12860.1| Carbamoyl-phosphate synthase, large subunit, glutamine-dependent
            [Xylella fastidiosa Dixon]
 gi|71730791|gb|EAO32864.1| Carbamoyl-phosphate synthase, large subunit, glutamine-dependent
            [Xylella fastidiosa subsp. sandyi Ann-1]
 gi|167964453|gb|ACA11463.1| carbamoyl-phosphate synthase large chain [Xylella fastidiosa M12]
 gi|182631065|gb|ACB91841.1| carbamoyl-phosphate synthase, large subunit [Xylella fastidiosa M23]
 gi|307579423|gb|ADN63392.1| carbamoyl phosphate synthase large subunit [Xylella fastidiosa subsp.
            fastidiosa GB514]
 gi|338178446|gb|EGO81432.1| Carbamoylphosphate synthase large subunit [Xylella fastidiosa EB92.1]
          Length = 1080

 Score = 1229 bits (3179), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 613/1068 (57%), Positives = 797/1068 (74%), Gaps = 21/1068 (1%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTDLR ILI+GAGPIVIGQACEFDYSG QACKAL+ EG+ V+L+NSNPATIMTDP +AD
Sbjct: 3    KRTDLRTILIIGAGPIVIGQACEFDYSGAQACKALRAEGFRVVLVNSNPATIMTDPDMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
              YI P+    VE+++ KE+PDALLPTMGGQTALN A+ LA+ G LEKYGVELIGAK +A
Sbjct: 63   AVYIEPIHWRTVEKIITKEKPDALLPTMGGQTALNCALDLADHGVLEKYGVELIGAKREA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I+ AEDR+LF+ AM+ IG++ P + +  +L+  + I  ++G FP IIRP+FTLGGTGGGI
Sbjct: 123  IRMAEDRELFRVAMQEIGLECPKAEVAKSLERALEIQAKVG-FPTIIRPSFTLGGTGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN++EFE I K GL  S   +VLVE+S+LGWKE+E+EV+RD +DN +I+CSIEN+DPMG
Sbjct: 182  AYNRQEFEEIIKRGLELSPVHEVLVEESVLGWKEFEMEVVRDASDNCIIVCSIENLDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTL+DKEYQRLRD SIA++R+IGV+ GGSNVQF ++P  G V+VIEMN
Sbjct: 242  VHTGDSITVAPAQTLSDKEYQRLRDASIAVLRKIGVDTGGSNVQFGIDPQTGRVVVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ N+IT  KTPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKIAAKLAVGYTLDELKNEITGGKTPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVK-ELDWD 505
            FAFEKFP ++  LTTQMKSVGE MA+GRTF ES QKA+R LE G  G   + +    + D
Sbjct: 362  FAFEKFPQADARLTTQMKSVGEVMAMGRTFAESLQKAVRGLETGKVGLEPTGLDLSSEDD 421

Query: 506  WEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQS 565
               LK  L+ P  +R+  +  A + G  V +++ LS+ID WFL Q +E++  E  L+T  
Sbjct: 422  LVVLKRELKAPGAERLFYVADAFRAGFAVADVYALSYIDPWFLDQIEEIVAAEGRLVTDG 481

Query: 566  VSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANT 625
            + ++      ++KR GFSD +IA  T + E  VR  R  L V P YKRVD+CA EF   T
Sbjct: 482  LGSIDGARLRQLKRIGFSDARIAQLTGTNEVAVRTLRRVLKVKPVYKRVDSCAGEFATGT 541

Query: 626  PYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNS 685
             Y+YS+Y+ ECE+AP+ ++K++ILGGGPNRIGQGIEFDYCC H + +L+  G+ETIM+N 
Sbjct: 542  AYLYSTYEEECEAAPSDRRKIMILGGGPNRIGQGIEFDYCCVHAALALREDGFETIMVNC 601

Query: 686  NPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEH 745
            NPETVSTDYDTSDRLYFEPLT+EDVL ++++E P G+IVQ+GGQTPLKL+    + L+ +
Sbjct: 602  NPETVSTDYDTSDRLYFEPLTLEDVLEIVEVEHPVGVIVQYGGQTPLKLA----KALEAN 657

Query: 746  RLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEI 805
             +P         + GTSP+SID AEDRERF  ++++L + QP    A++  +AL +A+EI
Sbjct: 658  GVP---------VIGTSPESIDLAEDRERFQRLVQQLGLRQPPNCTARTADEALVLAREI 708

Query: 806  GYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALA 865
            GYP+VVRPSYVLGGRAMEIVY++  L  Y+ +AV+V  + PVL+D++L +A+E+DVD +A
Sbjct: 709  GYPLVVRPSYVLGGRAMEIVYSEADLARYVRDAVKVSNDSPVLLDRFLDNAVEVDVDIIA 768

Query: 866  DSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMN 925
            D  G V+IGG+MEHIE+AGVHSGDS+C +P  ++S++  D +    I+LA+ LNV GLMN
Sbjct: 769  DPEGQVLIGGVMEHIEEAGVHSGDSSCSLPPYSLSAATQDDLRRQVIRLAQALNVIGLMN 828

Query: 926  CQYAITTSGD----VYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKE 981
             Q+AI ++ D    VYLLE NPRASRTVPFVSKA G PLAK AA  M+GK+L +   T E
Sbjct: 829  TQFAIQSNDDGSDIVYLLEVNPRASRTVPFVSKATGVPLAKIAARCMTGKTLAEQSVTCE 888

Query: 982  VIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLS 1041
            V+P + +VKEA+ PF K QG D +LGPEMRSTGEVMG+  SF  AFA+AQ A   + P  
Sbjct: 889  VVPAYYAVKEAIFPFAKLQGVDPILGPEMRSTGEVMGVGRSFAAAFARAQEAGDIRAPQP 948

Query: 1042 GTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAG 1101
            G  F+S+ D  K  +  +  A ++ GF +V+T+GT  +L+  G+A E V K+ EGRPH  
Sbjct: 949  GRAFVSVRDPDKKRVLPVVLALVERGFGVVATAGTYAWLQQNGVACEVVNKVAEGRPHIV 1008

Query: 1102 DMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALA 1149
            D++ NG+I  ++ T+ G +    D   +RR  L + V   TT++GA A
Sbjct: 1009 DLIKNGEIVYIINTTEGRAAIA-DSFSIRREALQHCVTYSTTIAGAKA 1055


>gi|349685580|ref|ZP_08896722.1| carbamoyl phosphate synthase large subunit [Gluconacetobacter
            oboediens 174Bp2]
          Length = 1084

 Score = 1229 bits (3179), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 619/1097 (56%), Positives = 797/1097 (72%), Gaps = 32/1097 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD+R ILI+GAGPIVIGQACEFDYSG QACKALKEEGY VIL+NSNPATIMTDPGLAD
Sbjct: 3    KRTDIRSILIIGAGPIVIGQACEFDYSGAQACKALKEEGYRVILVNSNPATIMTDPGLAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+TPE VE+++ +E+PDA+LPTMGGQTALN A+AL +SG L+K+ VELIGA  + 
Sbjct: 63   ATYIEPITPEFVERIILREKPDAVLPTMGGQTALNTAMALDKSGFLKKHNVELIGANAEV 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I +AEDR  F++AM  IG+++P S I ++L++  S    +G  P +IRP+FT+GG+GGGI
Sbjct: 123  IDRAEDRQKFREAMDEIGIESPRSLIAHSLEDARSALATVG-LPAVIRPSFTMGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEF+ I  +GL AS T++VL+E+S+LGWKEYE+EV+RD ADN +IICSIEN+DPMG
Sbjct: 182  AYNREEFDRIVSSGLDASPTTEVLIEESVLGWKEYEMEVVRDSADNCIIICSIENIDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPA TLTDKEYQRLRD S+A +R+IGVE GGSNVQF +NPVDG V+VIEMN
Sbjct: 242  VHTGDSITVAPALTLTDKEYQRLRDMSLACLRKIGVETGGSNVQFGINPVDGRVVVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRF 447
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT  TPASFEP+IDYVV KIPRF
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGYTLDELTNDITGSTPASFEPTIDYVVVKIPRF 361

Query: 448  AFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDWE 507
             FEKFPG+  LL+T MKSVGEAMA+GR+F E+ QK LRS+E G +G         D   +
Sbjct: 362  TFEKFPGTPALLSTSMKSVGEAMAIGRSFPEALQKGLRSMEIGLAGLDPVEAPG-DGGPD 420

Query: 508  QLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSVS 567
              + +L  P P+R+     A++ G+ V++IH+    + WFL +  +++  E  ++   + 
Sbjct: 421  AFRAALSQPRPERILMAAQALRAGLSVEDIHDACRFEPWFLRELAKIVAAEHAVVRDGLP 480

Query: 568  NMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTPY 627
                D    +K  GFSD Q+A  + +   E+ + R + GV+P YKR+DTCA EF + TPY
Sbjct: 481  E-DADSLRTLKAMGFSDIQLARLSGTNADEIAKLRENRGVLPVYKRIDTCAGEFASPTPY 539

Query: 628  MYSSYDF-----ECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIM 682
            MYSSY+      ECES PT +KK++ILGGGPNRIGQGIEFDYCC H +++L+ AG+ETIM
Sbjct: 540  MYSSYEGGYGVPECESRPTDRKKIVILGGGPNRIGQGIEFDYCCVHAAYALREAGFETIM 599

Query: 683  MNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGI----IVQFGGQTPLKLSLPI 738
            +N NPETVSTDYDTSDRLYFEPLT EDV+ +I  E+  G     IVQ+GGQTPLKLS   
Sbjct: 600  VNCNPETVSTDYDTSDRLYFEPLTGEDVIALIRREQENGTVLGCIVQYGGQTPLKLS--- 656

Query: 739  HQYLDEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADA 798
                   R   A+G   + + GT  D+ID AEDRERF A++  L + QP  GIA+S A+A
Sbjct: 657  -------RALEAAG---IPLLGTPADAIDRAEDRERFQAMLHRLGLRQPANGIARSPAEA 706

Query: 799  LAIAKEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVD----PERPVLIDKYLS 854
             A+A++IGYPVVVRPSYVLGGRAMEIV+   +L  Y+  A+++        PVLID YL+
Sbjct: 707  EAVAEKIGYPVVVRPSYVLGGRAMEIVHDRASLQRYMRVALQLAGAEVANGPVLIDHYLN 766

Query: 855  DAIEIDVDALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKL 914
            DAIE DVD +AD    V + G+MEHIE+AG+HSGDSAC +P  T+S + +  + S T  +
Sbjct: 767  DAIEADVDCIADGS-EVYVAGVMEHIEEAGIHSGDSACSLPPYTLSPAIVTELKSQTEAM 825

Query: 915  AKRLNVCGLMNCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLN 974
            A+ L + GLMN QYAI    ++++LE NPRASRTVPFV+KA G P+AK  A VM+G  L 
Sbjct: 826  ARELGIVGLMNVQYAIKGQ-EIFVLEVNPRASRTVPFVAKATGVPVAKIGARVMAGAKLG 884

Query: 975  DLGFTKEVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAA 1034
            +       +  HV+VKEAV PF +F   D +LGPEMRSTGEVMG+D SF  AFAK+Q+AA
Sbjct: 885  EFRLDDRAVAPHVAVKEAVFPFNRFPDVDTILGPEMRSTGEVMGLDASFERAFAKSQLAA 944

Query: 1035 GQKLPLSGTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMH 1094
            G KLPLSGTVFLS+ D  KP ++ I +   D+GF+IV+T GTA  L   G+ V+ V K+ 
Sbjct: 945  GVKLPLSGTVFLSVRDSDKPAVKSIGRLLSDMGFRIVATRGTAKCLREAGVNVDVVNKVL 1004

Query: 1095 EGRPHAGDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAI 1154
            EGRP+  D + +G +QM++ T+ G      D   +RR  L + +P  TT++GA A   AI
Sbjct: 1005 EGRPNCVDAIRSGDVQMVINTAQGAQAVS-DSFDIRRSALTHGIPHYTTIAGARAATHAI 1063

Query: 1155 RSLKSNTVTMTALQDFF 1171
             +++   + +  LQ +F
Sbjct: 1064 AAMREGVLEVAPLQSYF 1080


>gi|307611502|emb|CBX01176.1| carbamoyl-phosphate synthase large subunit [Legionella pneumophila
            130b]
          Length = 1067

 Score = 1229 bits (3179), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 618/1086 (56%), Positives = 790/1086 (72%), Gaps = 25/1086 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILILGAGPIVIGQACEFDYSGTQA +ALKEEGY VIL+NSNPATIMTDP LAD
Sbjct: 3    KRTDIKSILILGAGPIVIGQACEFDYSGTQAVRALKEEGYRVILVNSNPATIMTDPELAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  + V +++E ERPDALLPTMGGQTALN A+ L   G L KY VE+IGA  +A
Sbjct: 63   ATYIEPVQWKEVARIIEIERPDALLPTMGGQTALNCALDLVREGVLAKYSVEMIGATREA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I +AEDR+ F+Q M  IG+  P S I ++L+E I +   +G FP IIRP+FT+GG+GGGI
Sbjct: 123  IDRAEDREKFRQLMIKIGLDMPRSAIAHSLEEAIQVQARLG-FPAIIRPSFTMGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEFE IC  GL  S T ++L+++S+LGWKEYE+EV+RD  DN +I+C+IEN DPMG
Sbjct: 182  AYNREEFEEICIRGLELSPTHELLIDESVLGWKEYEMEVVRDKNDNCIIVCTIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQR+RD +I ++R +GV+ GGSNVQFA+NP DG ++V+EMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQRMRDAAIKVLRAVGVDTGGSNVQFAINPEDGRMLVVEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ N+IT  KTPASFEPSIDYVVTK+PR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGYTLDELKNEITGGKTPASFEPSIDYVVTKVPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            F F+KFP +   LTTQMKSVGE MA+G  FQES QKA+R LE G  G      KE   D 
Sbjct: 362  FNFDKFPQTPDTLTTQMKSVGEVMAIGSNFQESLQKAIRGLEIGRCGLHSLFHKE---DM 418

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
             +L+  LR P PDR+  I  A ++ + ++EIH  S +D WFL Q +EL+ +E+ ++ +++
Sbjct: 419  ARLRGHLREPTPDRLWYIADAFRQNLSLEEIHLESRVDPWFLAQIQELVLLERSIIGKTI 478

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
             ++ K   + +K RGF+D  +A     TE EVR +R+ L ++P YKR+D+CA EF ++T 
Sbjct: 479  RDLDKTTLHLMKHRGFADAYLAKLLGCTEAEVRARRVELEILPVYKRIDSCAGEFPSDTA 538

Query: 627  YMYSSYDFECESAP-TQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNS 685
            YMYS Y+  CE+ P + KKK++ILGGGPNRIGQGIEFDYCC H + SL+SAGY+TIM+N 
Sbjct: 539  YMYSCYEGSCEARPESNKKKIMILGGGPNRIGQGIEFDYCCVHAALSLRSAGYQTIMVNC 598

Query: 686  NPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEH 745
            NPETVSTD+DTSDRLYFEP+T+EDVL+++ +E+PEG+IV +GGQTPLKL+          
Sbjct: 599  NPETVSTDFDTSDRLYFEPVTLEDVLSIVAIEQPEGVIVHYGGQTPLKLA---------- 648

Query: 746  RLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEI 805
            R   A+G   V+I GTS D+ID AEDRERF  ++KEL + QP  G  +SEA+A+ +A +I
Sbjct: 649  RDLEANG---VKIIGTSSDAIDMAEDRERFQQMVKELKLHQPDNGTVRSEAEAIELANKI 705

Query: 806  GYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALA 865
            GYP+VVRPSYVLGGRAMEIVY +E L  YL +AVEV  + PVL+DK+L+DAIE+D+DA+ 
Sbjct: 706  GYPLVVRPSYVLGGRAMEIVYQEEDLRYYLSHAVEVSNDSPVLLDKFLNDAIEVDIDAVC 765

Query: 866  DSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMN 925
            D   +V+IG IMEHIEQAG+HSGDSAC +P  ++       +     K+A +L V GL+N
Sbjct: 766  DG-KDVLIGAIMEHIEQAGIHSGDSACTLPPFSLGVVVQQDLIEQIRKMALKLGVVGLIN 824

Query: 926  CQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTK-EVIP 984
             Q+AI  + D+Y+LE NPRASRTVPFVSKA G PLAK AAL   G SL D G  +    P
Sbjct: 825  AQFAI-QADDIYVLEVNPRASRTVPFVSKATGLPLAKIAALCKVGISLKDQGLNQNHHTP 883

Query: 985  KHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTV 1044
               S+K  V PF KF G D +LGPEM+STGEVMGI   F  A+AKAQ+ AG  +      
Sbjct: 884  SFYSIKLPVFPFIKFSGVDSILGPEMKSTGEVMGIAKRFGQAYAKAQLGAGCHIAKRRRA 943

Query: 1045 FLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMV 1104
            F+S+ D  K  +  IAK  +++GF+I++T GTA  L+  G+   RV K+ EGRPH  D +
Sbjct: 944  FVSVRDADKTRVGEIAKRLIELGFEIIATRGTALALQAAGVDCRRVFKVAEGRPHVLDFI 1003

Query: 1105 ANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTVTM 1164
             N +I  +V T+ G      D   +RR  L +KV   TT+SGA A   A++     TVT 
Sbjct: 1004 KNNEIDFIVNTTEGKQAIA-DSFAIRRNALQHKVSYTTTLSGAEAACLAMKYEDRETVTR 1062

Query: 1165 TALQDF 1170
              LQD 
Sbjct: 1063 --LQDL 1066


>gi|71065374|ref|YP_264101.1| carbamoyl-phosphate synthase large subunit [Psychrobacter arcticus
            273-4]
 gi|71038359|gb|AAZ18667.1| carbamoyl-phosphate synthase large subunit [Psychrobacter arcticus
            273-4]
          Length = 1084

 Score = 1228 bits (3178), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 608/1073 (56%), Positives = 784/1073 (73%), Gaps = 29/1073 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILI+GAGPIVIGQACEFDYSG QACKALKEEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIKSILIIGAGPIVIGQACEFDYSGAQACKALKEEGYRVILVNSNPATIMTDPAMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+T + VEQ++ KERPDA+LPTMGGQTALN A+ L + G L KY  ELIGA  D+
Sbjct: 63   ATYIEPITWQTVEQIIAKERPDAILPTMGGQTALNCALELDKHGVLTKYNCELIGATKDS 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I+ AEDR+LF +AMK IG++ P +    T++E  +   ++G +P IIRP+FT+GG+GGGI
Sbjct: 123  IEMAEDRNLFDKAMKRIGLECPRAETAETMEEAFATQEKMG-YPCIIRPSFTMGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN++EF  IC+ G   S   Q+L+++SL+GWKEYE+EV+RD  DN +IIC+IEN DPMG
Sbjct: 182  AYNRDEFIEICERGFDLSPNHQLLIDESLIGWKEYEMEVVRDKNDNCIIICAIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGVE GGSNVQF +NP  G ++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQIMRNASLAVLREIGVETGGSNVQFGINPDTGRMVVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITK-KTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL++GY+LD++ NDIT  KTPASFEP++DYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKIAAKLAIGYTLDELQNDITGGKTPASFEPALDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWG----CSNVKEL 502
            F FEKFP ++ +L+TQMKSVGE MA+GR FQES QKALR +E G  G+      S V  +
Sbjct: 362  FNFEKFPQADNVLSTQMKSVGEVMAIGRNFQESMQKALRGMETGNDGFDEQIDLSKVS-I 420

Query: 503  DWDWEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLL 562
            +    ++   L +P P+R+  I  A + GM VD++ +L+ ID WFL Q ++++  E  + 
Sbjct: 421  EKARSEITNRLTIPTPERIYYIADAFRIGMSVDDVFKLTKIDPWFLVQIEDIVKTEAQVK 480

Query: 563  TQSVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFE 622
                  +T+ +    KR+G SD ++A     ++K++R KR  L + P YKRVDTCAAEF 
Sbjct: 481  ALGFGGLTEKNLRSFKRKGLSDLRLAKLLGVSQKQLRTKRWDLNIYPVYKRVDTCAAEFA 540

Query: 623  ANTPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIM 682
             +T YMYS+YD ECE+ PT  KK++++GGGPNRIGQGIEFDYCC H + +++  GYETIM
Sbjct: 541  TSTAYMYSTYDSECEANPTNNKKIMVIGGGPNRIGQGIEFDYCCVHAALAMREDGYETIM 600

Query: 683  MNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYL 742
            +N NPETVSTDYDTSDRLYFEP+T+EDVL ++ +E P+G+IVQFGGQTPLKL+       
Sbjct: 601  VNCNPETVSTDYDTSDRLYFEPITLEDVLEIVRIENPDGVIVQFGGQTPLKLA------- 653

Query: 743  DEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIA 802
               R   A+G   V+I GTSPD+ID AEDRERF  +I++L++ QP   +A S  D L  A
Sbjct: 654  ---RALEAAG---VKIIGTSPDAIDRAEDRERFQHMIQQLNLVQPTNALATSLEDGLVKA 707

Query: 803  KEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVD 862
            K++GYP+VVRPSYVLGGRAMEIVY ++ L  YL  AV+   E PVL+D++L DAIE+DVD
Sbjct: 708  KDVGYPLVVRPSYVLGGRAMEIVYNEDELRHYLRTAVQASNEAPVLLDRFLDDAIEVDVD 767

Query: 863  ALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCG 922
             ++D   +VVIGGIM+HIEQAGVHSGDSAC +P  ++S    D + + T+ +AK L V G
Sbjct: 768  CVSDGT-DVVIGGIMQHIEQAGVHSGDSACSLPPYSLSKELCDVMRAQTVAMAKELGVVG 826

Query: 923  LMNCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEV 982
            LMN Q+A+     VY+LE NPRA+RTVPFVSK IG  LA+ AA  M+G SL D GFTKE+
Sbjct: 827  LMNVQFAVKGE-TVYILEVNPRAARTVPFVSKCIGTSLAQIAARCMAGTSLKDQGFTKEI 885

Query: 983  IPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLP--- 1039
            +P   +VKEAV PF KF G D +L PEM+STGEVMG+  +F  AF KA I + ++LP   
Sbjct: 886  VPAFFAVKEAVFPFAKFPGVDPILSPEMKSTGEVMGVGKTFGEAFYKAVIGSNERLPGLP 945

Query: 1040 ---LSGTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEG 1096
                + TVF+S+ D  K  +  IA+  +D GF IV+T+GT   L   GI  +++ K+ EG
Sbjct: 946  TEGETKTVFISVRDSDKEQVAPIARQLIDFGFNIVATTGTQKVLSDNGIECKQINKVTEG 1005

Query: 1097 RPHAGDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALA 1149
            RPH  D + NG I M++ T+ G    Q D   +RR  L  KV  +TT+  A A
Sbjct: 1006 RPHIVDALKNGNIDMIINTTEGKQA-QEDSFSIRRSALQGKVFYVTTLGAADA 1057


>gi|423207336|ref|ZP_17193892.1| carbamoyl-phosphate synthase large chain [Aeromonas veronii AMC34]
 gi|404620403|gb|EKB17300.1| carbamoyl-phosphate synthase large chain [Aeromonas veronii AMC34]
          Length = 1074

 Score = 1228 bits (3178), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 612/1068 (57%), Positives = 779/1068 (72%), Gaps = 18/1068 (1%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KR DL+ ILILGAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRNDLQSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+T E+V ++++KERPDA+LPTMGGQTALN A+AL + G L ++GVE+IGA  DA
Sbjct: 63   ATYIEPITWEVVREIIKKERPDAILPTMGGQTALNCALALEKHGVLAEFGVEMIGATADA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  F +AM++IG++ P +GI + ++E   +   +G FP IIRP+FT+GG+GGGI
Sbjct: 123  IDKAEDRSRFDKAMRSIGLECPRAGIAHNMEEAWGVQQMVG-FPCIIRPSFTMGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN EEF  IC+ GL  S T ++L+++SL+GWKEYE+EV+RD  DN +I+C+IEN DPMG
Sbjct: 182  AYNTEEFVEICERGLDLSPTKELLIDESLIGWKEYEMEVVRDRNDNCIIVCAIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            +HTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGVE GGSNVQF +NP DG +++IEMN
Sbjct: 242  IHTGDSITVAPAQTLTDKEYQLMRNASMAVLREIGVETGGSNVQFGINPKDGRMVIIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL++GY+LD++ NDIT  +TPASFEP+IDYVVTK+PR
Sbjct: 302  PRVSRSSALASKATGFPIAKIAAKLAIGYTLDELMNDITGGRTPASFEPAIDYVVTKVPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            F FEKF G+   LTTQMKSVGE MA+GR FQES  KALRSLE G +G+            
Sbjct: 362  FNFEKFAGANDRLTTQMKSVGEVMAIGRNFQESLHKALRSLETGKTGFDPMVDLNAPDSL 421

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
             ++++ L+    DR+  I  A + G+ +D I +L+ ID WFL Q ++L+ +E+ +  + +
Sbjct: 422  TRIRHELQDAGSDRIFYIADAFRAGLSMDGIFKLTKIDPWFLVQIEDLVKLEEEVKERGM 481

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
            + +  D    +KR+GF+D ++A      E EVR+ R    + P YKRVDTCAAEF  NT 
Sbjct: 482  AGLDADFLRALKRKGFADARLAKILGVAEGEVRKLRARHNIFPVYKRVDTCAAEFATNTA 541

Query: 627  YMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSN 686
            YMYSSYD ECE+AP  + K++I+GGGPNRIGQGIEFDYCC H + +L+  GYETIM+N N
Sbjct: 542  YMYSSYDEECEAAPGNRDKIMIIGGGPNRIGQGIEFDYCCVHAALALREDGYETIMVNCN 601

Query: 687  PETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHR 746
            PETVSTDYDTSDRLYFEP+T+EDVL ++ +E+P+G+IVQ+GGQTPLKL+          R
Sbjct: 602  PETVSTDYDTSDRLYFEPVTLEDVLEIVRIEKPKGVIVQYGGQTPLKLA----------R 651

Query: 747  LPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEIG 806
               A+G   V I GTSPD+ID AEDRERF + ++ L ++QP+ G   +   A+ +A+ I 
Sbjct: 652  ALEANG---VPIIGTSPDAIDRAEDRERFQSAVERLGLKQPENGTVTALEQAVLLAERIT 708

Query: 807  YPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALAD 866
            YP+VVRPSYVLGGRAMEIVY ++ L  Y   AV V  E PVL+D++L DA E+DVDA+ D
Sbjct: 709  YPLVVRPSYVLGGRAMEIVYDEQDLRRYFAEAVSVSNESPVLLDRFLDDATELDVDAICD 768

Query: 867  SCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNC 926
               +VVIGGIMEHIEQAG+HSGDS C +P  T+S    D I     KLA  L V GLMN 
Sbjct: 769  GT-DVVIGGIMEHIEQAGIHSGDSGCSLPPYTLSKKIQDEIREQVRKLALELGVIGLMNV 827

Query: 927  QYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPKH 986
            Q+A+    D+YL+E NPRA+RTVPFVSKA G PLAK AA VM+G+SL + GFTKE+IP +
Sbjct: 828  QFAV-KGDDIYLIEVNPRAARTVPFVSKATGAPLAKIAARVMAGQSLKEQGFTKEIIPPY 886

Query: 987  VSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVFL 1046
             SVKE VLPF KF G D LLGPEMRSTGEVMG+  SF  A+AKAQ+ A   +P  G   L
Sbjct: 887  YSVKEVVLPFAKFPGVDPLLGPEMRSTGEVMGVGSSFAEAYAKAQLGANHAVPKEGRALL 946

Query: 1047 SLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVAN 1106
            S+    K  +  +A   L++G+++ +T GTA  L    I    V K+HEGRPH  D + N
Sbjct: 947  SVRHSDKAQVVDLAAKLLELGYELDATHGTAVALGEASINPRLVNKVHEGRPHILDRIKN 1006

Query: 1107 GQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAI 1154
            G+   +V T+ G    Q D  +LRR  L  KV   TT++ A A   AI
Sbjct: 1007 GEYTYIVNTAEGRVAIQ-DSKQLRRAALQNKVAYTTTMNEAFATCMAI 1053


>gi|432872576|ref|ZP_20092392.1| carbamoyl-phosphate synthase large chain [Escherichia coli KTE147]
 gi|431405921|gb|ELG89153.1| carbamoyl-phosphate synthase large chain [Escherichia coli KTE147]
          Length = 1072

 Score = 1228 bits (3178), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 617/1070 (57%), Positives = 780/1070 (72%), Gaps = 18/1070 (1%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILILGAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  E+V +++EKERPDA+LPTMGGQTALN A+ L   G LE++GV +IGA  DA
Sbjct: 63   ATYIEPIHWEVVRKIIEKERPDAVLPTMGGQTALNCALELERQGVLEEFGVTMIGATADA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  F  AMK IG++T  SGI +T++E +++A ++G FP IIRP+FT+GG+GGGI
Sbjct: 123  IDKAEDRRRFDVAMKKIGLETARSGIAHTMEEALAVAADVG-FPCIIRPSFTMGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEFE IC  GL  S T ++L+++SL+GWKEYE+EV+RD  DN +I+CSIEN D MG
Sbjct: 182  AYNREEFEEICARGLDLSPTKELLIDESLIGWKEYEMEVVRDKNDNCIIVCSIENFDAMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            +HTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGVE GGSNVQFAVNP +G ++VIEMN
Sbjct: 242  IHTGDSITVAPAQTLTDKEYQIMRNASMAVLREIGVETGGSNVQFAVNPKNGRLIVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT  +TPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGYTLDELMNDITGGRTPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            F FEKF G+   LTTQMKSVGE MA+GRT QES QKALR LE G +G+      +     
Sbjct: 362  FNFEKFAGANDRLTTQMKSVGEVMAIGRTQQESLQKALRGLEVGATGFDPKVSLDDPEAL 421

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
             +++  L+    +R+  I  A + G+ VD +  L+ ID+WFL Q +EL+ +E+ +    +
Sbjct: 422  TKIRRELKDAGAERIWYIADAFRAGLSVDGVFNLTNIDRWFLVQIEELVRLEEKVAEVGI 481

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
            + +  D   ++KR+GF+D ++A      E E+R+ R    + P YKRVDTCAAEF  +T 
Sbjct: 482  TGLNADFLRQLKRKGFADARLAKLAGVREAEIRKLRDQYDLHPVYKRVDTCAAEFATDTA 541

Query: 627  YMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSN 686
            YMYS+Y+ ECES P+ + K+++LGGGPNRIGQGIEFDYCC H S +L+  GYETIM+N N
Sbjct: 542  YMYSTYEEECESNPSDRDKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVNCN 601

Query: 687  PETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHR 746
            PETVSTDYDTSDRLYFEP+T+EDVL ++ +E+P+G+IVQ+GGQTPLKL+          R
Sbjct: 602  PETVSTDYDTSDRLYFEPVTLEDVLEIVRIEKPKGVIVQYGGQTPLKLA----------R 651

Query: 747  LPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEIG 806
               A+G   V + GTSPD+ID AEDRERF   +  L ++QP      +   A+  AKEIG
Sbjct: 652  ALEAAG---VPVIGTSPDAIDRAEDRERFQHAVDRLKLKQPANATVTAIEMAVEKAKEIG 708

Query: 807  YPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALAD 866
            YP+VVRPSYVLGGRAMEIVY +  L  Y + AV V  + PVL+D +L DA+E+DVDA+ D
Sbjct: 709  YPLVVRPSYVLGGRAMEIVYDEADLRRYFQTAVSVSNDAPVLLDHFLDDAVEVDVDAICD 768

Query: 867  SCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNC 926
                V+IGGIMEHIEQAGVHSGDSAC +P  T+S    D +     KLA  L V GLMN 
Sbjct: 769  G-EMVLIGGIMEHIEQAGVHSGDSACSLPAYTLSQEIQDVMRQQVQKLAFELQVRGLMNV 827

Query: 927  QYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPKH 986
            Q+A+  + +VYL+E NPRA+RTVPFVSKA G PLAK AA VM+GK+L + G TKEVIP +
Sbjct: 828  QFAVKNN-EVYLIEVNPRAARTVPFVSKATGVPLAKVAARVMAGKTLAEQGVTKEVIPPY 886

Query: 987  VSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVFL 1046
             SVKE VLPF KF G D LLGPEMRSTGEVMG+  +F  AFAKAQ+ +   +   G   L
Sbjct: 887  YSVKEVVLPFNKFPGVDPLLGPEMRSTGEVMGVGRTFAEAFAKAQLGSNSTMKKHGRALL 946

Query: 1047 SLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVAN 1106
            S+ +  K  +  +A   L  GF++ +T GTA  L   GI    V K+HEGRPH  D + N
Sbjct: 947  SVREGDKERVVDLAAKLLKQGFELDATHGTAIVLGEAGINPRLVNKVHEGRPHIQDRIKN 1006

Query: 1107 GQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRS 1156
            G+   ++ T+SG    + D   +RR  L YKV   TT++G  A A A+ +
Sbjct: 1007 GEYTYIINTTSGRRAIE-DSRVIRRSALQYKVHYDTTLNGGFATAMALNA 1055


>gi|417611043|ref|ZP_12261519.1| carbamoyl-phosphate synthase large chain [Escherichia coli
            STEC_EH250]
 gi|345367017|gb|EGW99104.1| carbamoyl-phosphate synthase large chain [Escherichia coli
            STEC_EH250]
          Length = 1073

 Score = 1228 bits (3178), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 619/1071 (57%), Positives = 782/1071 (73%), Gaps = 19/1071 (1%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILILGAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  E+V +++EKERPDA+LPTMGGQTALN A+ L   G LE++GV +IGA  DA
Sbjct: 63   ATYIEPIHWEVVRKIIEKERPDAVLPTMGGQTALNCALELERQGVLEEFGVTMIGATADA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  F  AMK IG++T  SGI +T++E +++A ++G FP IIRP+FT+GG+GGGI
Sbjct: 123  IDKAEDRRRFDVAMKKIGLETARSGIAHTMEEALAVAADVG-FPCIIRPSFTMGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEFE IC  GL  S T ++L+++SL+GWKEYE+EV+RD  DN +I+CSIEN D MG
Sbjct: 182  AYNREEFEEICACGLDLSPTKELLIDESLIGWKEYEMEVVRDKNDNCIIVCSIENFDAMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            +HTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGVE GGSNVQFAVNP +G ++VIEMN
Sbjct: 242  IHTGDSITVAPAQTLTDKEYQIMRNASMAVLREIGVETGGSNVQFAVNPKNGRLIVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT  +TPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGYTLDELMNDITGGRTPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            F FEKF G+   LTTQMKSVGE MA+GRT QES QKALR LE G +G+      +     
Sbjct: 362  FNFEKFAGANDRLTTQMKSVGEVMAIGRTQQESLQKALRGLEVGATGFDPKVSLDDPEAL 421

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
             +++  L+    DR+  I  A + G+ VD +  L+ ID+WFL Q +EL+ +E+ +    +
Sbjct: 422  TKIRRELKDAGADRIWYIADAFRAGLSVDGVFNLTNIDRWFLVQIEELVRLEEKVAEVGI 481

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
            + +  D   ++KR+GF+D ++A      E E+R+ R    + P YKRVDTCAAEF  +T 
Sbjct: 482  TGLNADFLRQLKRKGFADARLAKLAGVREAEIRKLRDQYDLHPVYKRVDTCAAEFATDTA 541

Query: 627  YMYSSYDFECESAP-TQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNS 685
            YMYS+Y+ ECE+ P T ++K+++LGGGPNRIGQGIEFDYCC H S +L+  GYETIM+N 
Sbjct: 542  YMYSTYEEECEANPSTDREKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVNC 601

Query: 686  NPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEH 745
            NPETVSTDYDTSDRLYFEP+T+EDVL ++ +E+P+G+IVQ+GGQTPLKL+          
Sbjct: 602  NPETVSTDYDTSDRLYFEPVTLEDVLEIVRIEKPKGVIVQYGGQTPLKLA---------- 651

Query: 746  RLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEI 805
            R   A+G   V + GTSPD+ID AEDRERF   ++ L ++QP      +   A+  AKEI
Sbjct: 652  RALEAAG---VPVIGTSPDAIDRAEDRERFQHAVERLKLKQPANATVTAIEMAVEKAKEI 708

Query: 806  GYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALA 865
            GYP+VVRPSYVLGGRAMEIVY +  L  Y + AV V  + PVL+D +L DA+E+DVDA+ 
Sbjct: 709  GYPLVVRPSYVLGGRAMEIVYDEADLRRYFQTAVSVSNDAPVLLDHFLDDAVEVDVDAIC 768

Query: 866  DSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMN 925
            D    V+IGGIMEHIEQAGVHSGDSAC +P  T+S    D +     KLA  L V GLMN
Sbjct: 769  DG-EMVLIGGIMEHIEQAGVHSGDSACSLPAYTLSQEIQDVMRQQVQKLAFELQVRGLMN 827

Query: 926  CQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPK 985
             Q+A+  + +VYL+E NPRA+RTVPFVSKA G PLAK AA VM+GKSL + G TKEVIP 
Sbjct: 828  VQFAVKNN-EVYLIEVNPRAARTVPFVSKATGVPLAKVAARVMAGKSLAEQGVTKEVIPP 886

Query: 986  HVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVF 1045
            + SVKE VLPF KF G D LLGPEMRSTGEVMG+  +F  AFAKAQ+ +   +   G   
Sbjct: 887  YYSVKEVVLPFNKFPGVDPLLGPEMRSTGEVMGVGRTFAEAFAKAQLGSNSTMKKHGRAL 946

Query: 1046 LSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVA 1105
            LS+ +  K  +  +A   L  GF++ +T GTA  L   GI    V K+HEGRPH  D + 
Sbjct: 947  LSVREGDKERVVDLAAKLLKQGFELDATHGTAIVLGEAGINPRLVNKVHEGRPHIQDRIK 1006

Query: 1106 NGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRS 1156
            NG+   ++ T+SG    + D   +RR  L YKV   TT++G  A A A+ +
Sbjct: 1007 NGEYTYIINTTSGRRAIE-DSRVIRRSALQYKVHYDTTLNGGFATAMALNA 1056


>gi|198241932|ref|YP_002214022.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Dublin str. CT_02021853]
 gi|375117499|ref|ZP_09762666.1| carbamoyl-phosphate synthase, large subunit [Salmonella enterica
            subsp. enterica serovar Dublin str. SD3246]
 gi|445147892|ref|ZP_21388495.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Dublin str. SL1438]
 gi|445155823|ref|ZP_21392543.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Dublin str. HWS51]
 gi|197936448|gb|ACH73781.1| carbamoyl-phosphate synthase, large subunit [Salmonella enterica
            subsp. enterica serovar Dublin str. CT_02021853]
 gi|326621766|gb|EGE28111.1| carbamoyl-phosphate synthase, large subunit [Salmonella enterica
            subsp. enterica serovar Dublin str. SD3246]
 gi|444844149|gb|ELX69395.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Dublin str. SL1438]
 gi|444848691|gb|ELX73814.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Dublin str. HWS51]
          Length = 1075

 Score = 1228 bits (3178), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 618/1078 (57%), Positives = 784/1078 (72%), Gaps = 19/1078 (1%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILILGAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  E+V +++EKERPDA+LPTMGGQTALN A+ L   G LE++GV +IGA  DA
Sbjct: 63   ATYIEPIHWEVVRKIIEKERPDAVLPTMGGQTALNCALELERQGVLEEFGVTMIGATADA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  F  AMK IG+ T  SGI +T++E +++A ++G FP IIRP+FT+GGTGGGI
Sbjct: 123  IDKAEDRRRFDIAMKKIGLDTARSGIAHTMEEALAVAADVG-FPCIIRPSFTMGGTGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEFE IC+ GL  S T+++L+++SL+GWKEYE+EV+RD  DN +I+CSIEN D MG
Sbjct: 182  AYNREEFEEICERGLDLSPTNELLIDESLIGWKEYEMEVVRDKNDNCIIVCSIENFDAMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            +HTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGVE GGSNVQFAVNP +G ++VIEMN
Sbjct: 242  IHTGDSITVAPAQTLTDKEYQIMRNASMAVLREIGVETGGSNVQFAVNPKNGRLIVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT  +TPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGYTLDELMNDITGGRTPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            F FEKF G+   LTTQMKSVGE MA+GRT QES QKALR LE G +G+      +     
Sbjct: 362  FNFEKFAGANDRLTTQMKSVGEVMAIGRTQQESLQKALRGLEVGATGFDPKVSLDDPEAL 421

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
             +++  L+    DR+  I  A + G+ VD +  L+ ID+WFL Q +EL+ +E+ +    +
Sbjct: 422  TKIRRELKDAGADRIWYIADAFRAGLSVDGVFNLTNIDRWFLVQIEELVRLEEKVAEVGI 481

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
            + +  D   ++KR+GF+D ++A      E E+R+ R    + P YKRVDTCAAEF  +T 
Sbjct: 482  TGLNADFLLQLKRKGFADARLAKLAGVREAEIRKLRDQYDLHPVYKRVDTCAAEFATDTA 541

Query: 627  YMYSSYDFECESAPT-QKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNS 685
            YMYS+Y+ ECE+ P+  + K+++LGGGPNRIGQGIEFDYCC H S +L+  GYETIM+N 
Sbjct: 542  YMYSTYEDECEANPSVDRDKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVNC 601

Query: 686  NPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEH 745
            NPETVSTDYDTSDRLYFEP+T+EDVL ++ +E+P+G+IVQ+GGQTPLKL+          
Sbjct: 602  NPETVSTDYDTSDRLYFEPVTLEDVLEIVRIEKPKGVIVQYGGQTPLKLA---------- 651

Query: 746  RLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEI 805
            R   A+G   V + GTSPD+ID AEDRERF   +  L ++QP      +   A+  AKEI
Sbjct: 652  RALEAAG---VPVIGTSPDAIDRAEDRERFQHAVDRLKLKQPANATVTAIEQAVEKAKEI 708

Query: 806  GYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALA 865
            GYP+VVRPSYVLGGRAMEIVY +  L  Y + AV V  + PVL+D++L DA+E+DVDA+ 
Sbjct: 709  GYPLVVRPSYVLGGRAMEIVYDEADLRRYFQTAVSVSNDAPVLLDRFLDDAVEVDVDAIC 768

Query: 866  DSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMN 925
            D    V+IGGIMEHIEQAGVHSGDSAC +P  T+S    D +     KLA  L V GLMN
Sbjct: 769  DG-EMVLIGGIMEHIEQAGVHSGDSACSLPAYTLSQEIQDVMRQQVQKLAFELQVRGLMN 827

Query: 926  CQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPK 985
             Q+A+  + +VYL+E NPRA+RTVPFVSKA G PLAK AA VM+GKSL + G TKE+IP 
Sbjct: 828  VQFAVKDN-EVYLIEVNPRAARTVPFVSKATGVPLAKVAARVMAGKSLTEQGVTKEIIPP 886

Query: 986  HVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVF 1045
            + SVKE VLPF KF G D LLGPEMRSTGEVMG+  +F  AFAKAQ+ +   +   G   
Sbjct: 887  YYSVKEVVLPFNKFPGVDPLLGPEMRSTGEVMGVGRTFAEAFAKAQLGSNSTMKKQGRAL 946

Query: 1046 LSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVA 1105
            LS+ +  K  +  +A   L  GF++ +T GTA  L   GI    V K+HEGRPH  D + 
Sbjct: 947  LSVREGDKERVVDLAAKLLKQGFELDATHGTAIVLGEAGINPRLVNKVHEGRPHIQDRIK 1006

Query: 1106 NGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTVT 1163
            NG+   ++ T++G    + D   +RR  L YKV   TT++G  A   A+ +  +  VT
Sbjct: 1007 NGEYTYIINTTAGRRAIE-DSRVIRRSALQYKVHYDTTLNGGFATTMALNADATEKVT 1063


>gi|378578102|ref|ZP_09826782.1| carbamoyl-phosphate synthase large subunit [Pantoea stewartii subsp.
            stewartii DC283]
 gi|377819211|gb|EHU02291.1| carbamoyl-phosphate synthase large subunit [Pantoea stewartii subsp.
            stewartii DC283]
          Length = 1076

 Score = 1228 bits (3178), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 616/1071 (57%), Positives = 784/1071 (73%), Gaps = 19/1071 (1%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILILGAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  E+V +++EKERPDA+LPTMGGQTALN A+ L   G L+++GV +IGA  DA
Sbjct: 63   ATYIEPIHWEVVRKIIEKERPDAVLPTMGGQTALNCALELERQGVLDEFGVTMIGATADA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  F  AMK+IG+ T  SGI +T++E +++A ++G FP IIRP+FT+GGTGGGI
Sbjct: 123  IDKAEDRRRFDVAMKSIGLDTARSGIAHTMEEALAVAADVG-FPCIIRPSFTMGGTGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEFE IC+ GL  S T+++L+++SL+GWKEYE+EV+RD  DN +I+CSIEN D MG
Sbjct: 182  AYNREEFEEICERGLDLSPTNELLIDESLIGWKEYEMEVVRDKNDNCIIVCSIENFDAMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            +HTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGVE GGSNVQFAVNP +G ++VIEMN
Sbjct: 242  IHTGDSITVAPAQTLTDKEYQIMRNASLAVLREIGVETGGSNVQFAVNPKNGRLIVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VG++LD++ NDIT  +TPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGFTLDELMNDITGGRTPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            F FEKF G+   LTTQMKSVGE MA+GRTFQES QKALR LE G +G+      +     
Sbjct: 362  FNFEKFAGANDRLTTQMKSVGEVMAIGRTFQESVQKALRGLEVGANGFDPKVHLDDAEAL 421

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
             +++  L+    DR+  I  A + GM VD +  L+ ID+WFL Q +EL+ +E+ +  + +
Sbjct: 422  TRIRRELKDAGSDRIWYIADAFRAGMSVDGVFNLTNIDRWFLVQIEELVRLEEQVAREGI 481

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
            + +  D    +KR+GF+D ++A      E E+R+ R    + P YKRVDTCAAEF  +T 
Sbjct: 482  NGLNADFLRALKRKGFADARLAALAGVAEGEIRKLRQQHHLHPVYKRVDTCAAEFATDTA 541

Query: 627  YMYSSYDFECESAPTQ-KKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNS 685
            YMYS+Y+ ECE+ P Q + K+++LGGGPNRIGQGIEFDYCC H + +L+  GYETIM+N 
Sbjct: 542  YMYSTYEEECEAHPNQDRDKIMVLGGGPNRIGQGIEFDYCCVHAALALREDGYETIMVNC 601

Query: 686  NPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEH 745
            NPETVSTDYDTSDRLYFEP+T+EDVL ++ +E+P+G+IVQ+GGQTPLKL+          
Sbjct: 602  NPETVSTDYDTSDRLYFEPVTLEDVLEIVRIEKPKGVIVQYGGQTPLKLA---------- 651

Query: 746  RLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEI 805
            R   A+G   V + GTSPD+ID AEDRERF   +  LS++QP      +   A+  A  I
Sbjct: 652  RALEAAG---VPVIGTSPDAIDRAEDRERFQQAVDRLSLKQPANATVTTLEQAVEKAAGI 708

Query: 806  GYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALA 865
            GYP+VVRPSYVLGGRAMEIVY +  L  Y + AV V  + PVL+D++L DA+E+DVDA+ 
Sbjct: 709  GYPLVVRPSYVLGGRAMEIVYDEIDLKRYFQTAVSVSNDAPVLLDRFLDDAVEVDVDAIC 768

Query: 866  DSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMN 925
            D    V+IGGIMEHIEQAGVHSGDSAC +P  T+S    + +     KLA  LNV GLMN
Sbjct: 769  DG-ERVLIGGIMEHIEQAGVHSGDSACSLPAYTLSQDIQNVMRQQVEKLAFELNVRGLMN 827

Query: 926  CQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPK 985
             Q+A+  + +VYL+E NPRA+RTVPFVSKA G PLAK AA VM+GK+L + G TKEVIP 
Sbjct: 828  VQFAVKDN-EVYLIEVNPRAARTVPFVSKATGVPLAKVAARVMAGKTLAEQGVTKEVIPP 886

Query: 986  HVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVF 1045
            + SVKE VLPF KFQG D +LGPEMRSTGEVMG+  +F  AFAKA + A   +  +G   
Sbjct: 887  YYSVKEVVLPFNKFQGVDPILGPEMRSTGEVMGVGRTFAEAFAKAMLGAQSNMKKTGRAL 946

Query: 1046 LSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVA 1105
            LS+ +  K  +  +A      GF++ +T GTA  L   GI    V K+HEGRPH  D + 
Sbjct: 947  LSVREGDKKRIVDLAAKLQKFGFELDATHGTAVVLGEAGINPRLVNKVHEGRPHIQDRLK 1006

Query: 1106 NGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRS 1156
            NG+   +V T++G    + D   +RR  L YKV   TT++G  A A A+ +
Sbjct: 1007 NGEYAYIVNTTAGRQAIE-DSKLIRRSALQYKVHYDTTLNGGFATAMALNA 1056


>gi|200388769|ref|ZP_03215381.1| carbamoyl-phosphate synthase, large subunit [Salmonella enterica
            subsp. enterica serovar Virchow str. SL491]
 gi|374999798|ref|ZP_09724139.1| carbamoyl-phosphate synthase, large subunit [Salmonella enterica
            subsp. enterica serovar Infantis str. SARB27]
 gi|418843713|ref|ZP_13398509.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Newport str. CVM 19443]
 gi|418857102|ref|ZP_13411733.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Newport str. CVM 19470]
 gi|418864702|ref|ZP_13419227.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Newport str. CVM 19536]
 gi|418869934|ref|ZP_13424365.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Newport str. CVM 4176]
 gi|199605867|gb|EDZ04412.1| carbamoyl-phosphate synthase, large subunit [Salmonella enterica
            subsp. enterica serovar Virchow str. SL491]
 gi|353078016|gb|EHB43775.1| carbamoyl-phosphate synthase, large subunit [Salmonella enterica
            subsp. enterica serovar Infantis str. SARB27]
 gi|392816469|gb|EJA72397.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Newport str. CVM 19443]
 gi|392830154|gb|EJA85811.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Newport str. CVM 19536]
 gi|392833785|gb|EJA89396.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Newport str. CVM 4176]
 gi|392835414|gb|EJA91010.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Newport str. CVM 19470]
          Length = 1075

 Score = 1228 bits (3178), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 618/1078 (57%), Positives = 784/1078 (72%), Gaps = 19/1078 (1%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILILGAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  E+V +++EKERPDA+LPTMGGQTALN A+ L   G LE++GV +IGA  DA
Sbjct: 63   ATYIEPIHWEVVRKIIEKERPDAVLPTMGGQTALNCALELERQGVLEEFGVTMIGATADA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  F  AMK IG+ T  SGI +T++E +++A ++G FP IIRP+FT+GGTGGGI
Sbjct: 123  IDKAEDRRRFDIAMKKIGLDTARSGIAHTMEEALAVAADVG-FPCIIRPSFTMGGTGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEFE IC+ GL  S T+++L+++SL+GWKEYE+EV+RD  DN +I+CSIEN D MG
Sbjct: 182  AYNREEFEEICERGLDLSPTNELLIDESLIGWKEYEMEVVRDKNDNCIIVCSIENFDAMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            +HTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGVE GGSNVQFAVNP +G ++VIEMN
Sbjct: 242  IHTGDSITVAPAQTLTDKEYQIMRNASMAVLREIGVETGGSNVQFAVNPKNGRLIVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT  +TPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGYTLDELMNDITGGRTPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            F FEKF G+   LTTQMKSVGE MA+GRT QES QKALR LE G +G+      +     
Sbjct: 362  FNFEKFAGANDRLTTQMKSVGEVMAIGRTQQESLQKALRGLEVGATGFDPKVSLDDPEAL 421

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
             +++  L+    DR+  I  A + G+ VD +  L+ ID+WFL Q +EL+ +E+ +    +
Sbjct: 422  TKIRRELKDAGADRIWYIADAFRAGLSVDGVFNLTNIDRWFLVQIEELVRLEEKVAEVGI 481

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
            + +  D   ++KR+GF+D ++A      E E+R+ R    + P YKRVDTCAAEF  +T 
Sbjct: 482  TGLNADFLRQLKRKGFADARLAKLAGVREAEIRKLRDQYDLHPVYKRVDTCAAEFATDTA 541

Query: 627  YMYSSYDFECESAPT-QKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNS 685
            YMYS+Y+ ECE+ P+  + K+++LGGGPNRIGQGIEFDYCC H S +L+  GYETIM+N 
Sbjct: 542  YMYSTYEDECEANPSVDRDKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVNC 601

Query: 686  NPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEH 745
            NPETVSTDYDTSDRLYFEP+T+EDVL ++ +E+P+G+IVQ+GGQTPLKL+          
Sbjct: 602  NPETVSTDYDTSDRLYFEPVTLEDVLEIVRIEKPKGVIVQYGGQTPLKLA---------- 651

Query: 746  RLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEI 805
            R   A+G   V + GTSPD+ID AEDRERF   +  L ++QP      +   A+  AKEI
Sbjct: 652  RALEAAG---VPVIGTSPDAIDRAEDRERFQHAVDRLKLKQPANATVTAIEQAVEKAKEI 708

Query: 806  GYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALA 865
            GYP+VVRPSYVLGGRAMEIVY +  L  Y + AV V  + PVL+D++L DA+E+DVDA+ 
Sbjct: 709  GYPLVVRPSYVLGGRAMEIVYDEADLRRYFQTAVSVSNDAPVLLDRFLDDAVEVDVDAIC 768

Query: 866  DSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMN 925
            D    V+IGGIMEHIEQAGVHSGDSAC +P  T+S    D +     KLA  L V GLMN
Sbjct: 769  DG-EMVLIGGIMEHIEQAGVHSGDSACSLPAYTLSQEIQDVMRQQVQKLAFELQVRGLMN 827

Query: 926  CQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPK 985
             Q+A+  + +VYL+E NPRA+RTVPFVSKA G PLAK AA VM+GKSL + G TKE+IP 
Sbjct: 828  VQFAVKDN-EVYLIEVNPRAARTVPFVSKATGVPLAKVAARVMAGKSLTEQGVTKEIIPP 886

Query: 986  HVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVF 1045
            + SVKE VLPF KF G D LLGPEMRSTGEVMG+  +F  AFAKAQ+ +   +   G   
Sbjct: 887  YYSVKEVVLPFNKFPGVDPLLGPEMRSTGEVMGVGRTFAEAFAKAQLGSNSTMKKQGRAL 946

Query: 1046 LSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVA 1105
            LS+ +  K  +  +A   L  GF++ +T GTA  L   GI    V K+HEGRPH  D + 
Sbjct: 947  LSVREGDKERVVDLAAKLLKQGFELDATHGTAIVLGEAGINPRLVNKVHEGRPHIQDRIK 1006

Query: 1106 NGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTVT 1163
            NG+   ++ T++G    + D   +RR  L YKV   TT++G  A   A+ +  +  VT
Sbjct: 1007 NGEYTYIINTTAGRRAIE-DSRVIRRSALQYKVHYDTTLNGGFATTMALNADATEKVT 1063


>gi|194434563|ref|ZP_03066821.1| carbamoyl-phosphate synthase, large subunit [Shigella dysenteriae
            1012]
 gi|416284999|ref|ZP_11647539.1| Carbamoyl-phosphate synthase large chain [Shigella boydii ATCC 9905]
 gi|417670445|ref|ZP_12319947.1| carbamoyl-phosphate synthase large chain [Shigella dysenteriae
            155-74]
 gi|417687794|ref|ZP_12337047.1| carbamoyl-phosphate synthase large chain [Shigella boydii 5216-82]
 gi|420345102|ref|ZP_14846537.1| carbamoyl-phosphate synthase large chain [Shigella boydii 965-58]
 gi|194417216|gb|EDX33327.1| carbamoyl-phosphate synthase, large subunit [Shigella dysenteriae
            1012]
 gi|320179591|gb|EFW54540.1| Carbamoyl-phosphate synthase large chain [Shigella boydii ATCC 9905]
 gi|332095318|gb|EGJ00341.1| carbamoyl-phosphate synthase large chain [Shigella boydii 5216-82]
 gi|332097825|gb|EGJ02798.1| carbamoyl-phosphate synthase large chain [Shigella dysenteriae
            155-74]
 gi|391276885|gb|EIQ35646.1| carbamoyl-phosphate synthase large chain [Shigella boydii 965-58]
          Length = 1073

 Score = 1228 bits (3178), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 619/1071 (57%), Positives = 783/1071 (73%), Gaps = 19/1071 (1%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILILGAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  E+V +++EKERPDA+LPTMGGQTALN A+ L   G LE++GV +IGA  DA
Sbjct: 63   ATYIEPIHWEVVRKIIEKERPDAVLPTMGGQTALNCALELERQGVLEEFGVTMIGATADA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  F  AMK IG++T  SGI +T++E +++A ++G FP IIRP+FT+GG+GGGI
Sbjct: 123  IDKAEDRRRFDVAMKKIGLETARSGIAHTMEEALAVAADVG-FPCIIRPSFTMGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEFE IC  GLA S T ++L+++SL+GWKEYE+EV+RD  DN +I+CSIEN D MG
Sbjct: 182  AYNREEFEEICARGLALSPTKELLIDESLIGWKEYEMEVVRDKNDNCIIVCSIENFDAMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            +HTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGVE GGSNVQFAVNP +G ++VIEMN
Sbjct: 242  IHTGDSITVAPAQTLTDKEYQIMRNASMAVLREIGVETGGSNVQFAVNPKNGRLIVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT  +TPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGYTLDELMNDITGGRTPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            F FEKF G+   LTTQMKSVGE MA+GRT QES QKALR LE G +G+      +     
Sbjct: 362  FNFEKFAGANDRLTTQMKSVGEVMAIGRTQQESLQKALRGLEVGATGFDPKVSLDDPEAL 421

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
             +++  L+    +R+  I  A + G+ VD +  L+ ID+WFL Q +EL+ +E+ +    +
Sbjct: 422  TKIRRELKDAGAERIWYIADAFRAGLSVDGVFNLTNIDRWFLVQIEELVRLEEKVAEVGI 481

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
            + +  D   ++KR+GF+D ++A      E E+R+ R    + P YKRVDTCAAEF  +T 
Sbjct: 482  TGLNADFLRQLKRKGFADARLAKLAGVREAEIRKLRDQYDLHPVYKRVDTCAAEFATDTA 541

Query: 627  YMYSSYDFECESAP-TQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNS 685
            YMYS+Y+ ECE+ P T ++K+++LGGGPNRIGQGIEFDYCC H S +L+  GYETIM+N 
Sbjct: 542  YMYSTYEEECEANPSTDREKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVNC 601

Query: 686  NPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEH 745
            NPETVSTDYDTSDRLYFEP+T+EDVL ++ +E+P+G+IVQ+GGQTPLKL+          
Sbjct: 602  NPETVSTDYDTSDRLYFEPVTLEDVLEIVRIEKPKGVIVQYGGQTPLKLA---------- 651

Query: 746  RLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEI 805
            R   A+G   V + GTSPD+ID AEDRERF   ++ L ++QP      +   A+  AKEI
Sbjct: 652  RALEAAG---VPVIGTSPDAIDRAEDRERFQHAVERLKLKQPANATVTAIEMAVEKAKEI 708

Query: 806  GYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALA 865
            GYP+VVRPSYVLGGRAMEIVY +  L  Y + AV V  + PVL+D +L DA+E+DVDA+ 
Sbjct: 709  GYPLVVRPSYVLGGRAMEIVYDEADLRRYFQTAVSVSNDAPVLLDHFLDDAVEVDVDAIC 768

Query: 866  DSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMN 925
            D    V+IGGIMEHIEQAGVHSGDSAC +P  T+S    D +     KLA  L V GLMN
Sbjct: 769  DG-EMVLIGGIMEHIEQAGVHSGDSACSLPAYTLSQEIQDVMRQQVQKLAFELQVRGLMN 827

Query: 926  CQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPK 985
             Q+A+  + +VYL+E NPRA+RTVPFVSKA G PLAK AA VM+GKSL + G TKEVIP 
Sbjct: 828  VQFAVKNN-EVYLIEVNPRAARTVPFVSKATGVPLAKVAARVMAGKSLAEQGVTKEVIPP 886

Query: 986  HVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVF 1045
            + SVKE VLPF KF G D LLGPEMRSTGEVMG+  +F  AFAKAQ+ +   +   G   
Sbjct: 887  YYSVKEVVLPFNKFPGVDPLLGPEMRSTGEVMGVGRTFAEAFAKAQLGSNSTMKKHGRAL 946

Query: 1046 LSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVA 1105
            LS+ +  K  +  +A   L  GF++ +T GTA  L   GI    V K+HEGRPH  D + 
Sbjct: 947  LSVREGDKERVVDLAAKLLKQGFELDATHGTAIVLGEAGINPRLVNKVHEGRPHIQDRIK 1006

Query: 1106 NGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRS 1156
            NG+   ++ T+SG    + D   +RR  L YKV   TT++G  A A A+ +
Sbjct: 1007 NGEYTYIINTTSGRRAIE-DSRVIRRSALQYKVHYDTTLNGGFATAMALNA 1056


>gi|386014621|ref|YP_005932897.1| carbamoyl-phosphate synthase large subunit [Pantoea ananatis AJ13355]
 gi|327392679|dbj|BAK10101.1| carbamoyl-phosphate synthase large chain CarB [Pantoea ananatis
            AJ13355]
          Length = 1076

 Score = 1228 bits (3178), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 616/1071 (57%), Positives = 784/1071 (73%), Gaps = 19/1071 (1%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILILGAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  E+V +++EKERPDA+LPTMGGQTALN A+ L   G LE++GV +IGA  DA
Sbjct: 63   ATYIEPIHWEVVRKIIEKERPDAVLPTMGGQTALNCALELERQGVLEEFGVTMIGATADA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  F  AMK+IG+ T  SGI +T+DE +++A ++G FP IIRP+FT+GGTGGGI
Sbjct: 123  IDKAEDRRRFDVAMKSIGLDTARSGIAHTMDEALAVAADVG-FPCIIRPSFTMGGTGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEFE IC+ GL  S T+++L+++SL+GWKEYE+EV+RD  DN +I+CSIEN D MG
Sbjct: 182  AYNREEFEEICERGLDLSPTNELLIDESLIGWKEYEMEVVRDKNDNCIIVCSIENFDAMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            +HTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGVE GGSNVQFAVNP +G ++VIEMN
Sbjct: 242  IHTGDSITVAPAQTLTDKEYQIMRNASLAVLREIGVETGGSNVQFAVNPKNGRLIVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VG++LD++ NDIT  +TPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGFTLDELMNDITGGRTPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            F FEKF G+   LTTQMKSVGE MA+GRTFQES QKALR LE G +G+      +     
Sbjct: 362  FNFEKFAGANDRLTTQMKSVGEVMAIGRTFQESVQKALRGLEVGANGFDPKVHLDDAEAL 421

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
             +++  L+    DR+  I  A + GM VD +  L+ ID+WFL Q +EL+ +E+ +  + V
Sbjct: 422  TRIRRELKDAGSDRIWYIADAFRAGMSVDGVFNLTNIDRWFLVQIEELVRLEEQVAREGV 481

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
            + +  D    +KR+GF+D ++A      E E+R+ R    + P YKRVDTCAAEF  +T 
Sbjct: 482  NGLNADFLRTLKRKGFADARLASLVGVAEGEIRKLRQHHNLHPVYKRVDTCAAEFSTDTA 541

Query: 627  YMYSSYDFECESAPTQ-KKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNS 685
            YMYS+Y+ ECE+ P Q + K+++LGGGPNRIGQGIEFDYCC H + +L+  G+ETIM+N 
Sbjct: 542  YMYSTYEEECEANPNQDRDKIMVLGGGPNRIGQGIEFDYCCVHAALALREDGFETIMVNC 601

Query: 686  NPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEH 745
            NPETVSTDYDTSDRLYFEP+T+EDVL ++ +E+P+G+IVQ+GGQTPLKL+          
Sbjct: 602  NPETVSTDYDTSDRLYFEPVTLEDVLEIVRIEKPKGVIVQYGGQTPLKLA---------- 651

Query: 746  RLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEI 805
            R   A+G   V + GTSPD+ID AEDRERF   +  L+++QP      +   A+  A  I
Sbjct: 652  RALEAAG---VPVIGTSPDAIDRAEDRERFQQAVDRLNLKQPANATVATLEQAVEKAAGI 708

Query: 806  GYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALA 865
            GYP+VVRPSYVLGGRAMEIVY +  L  Y + AV V  + PVL+D++L DA+E+DVDA+ 
Sbjct: 709  GYPLVVRPSYVLGGRAMEIVYDEIDLKRYFQTAVSVSNDAPVLLDRFLDDAVEVDVDAIC 768

Query: 866  DSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMN 925
            D    V+IGGIMEHIEQAGVHSGDSAC +P  T+S    + +     KLA  LNV GLMN
Sbjct: 769  DG-ERVLIGGIMEHIEQAGVHSGDSACSLPAYTLSQDIQNVMRQQVEKLAFELNVRGLMN 827

Query: 926  CQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPK 985
             Q+A+  + +VYL+E NPRA+RTVPFVSKA G PLAK AA VM+GK+L + G T+EVIP 
Sbjct: 828  VQFAVKDN-EVYLIEVNPRAARTVPFVSKATGVPLAKVAARVMAGKTLAEQGVTEEVIPP 886

Query: 986  HVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVF 1045
            + SVKE VLPF KFQG D +LGPEMRSTGEVMG+  +F  AFAKA + A   +  +G   
Sbjct: 887  YYSVKEVVLPFNKFQGVDPILGPEMRSTGEVMGVGRTFAEAFAKAMLGAQSNMKKTGRAL 946

Query: 1046 LSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVA 1105
            LS+ +  K  +  +A      GF++ +T GTA  L   GI    V K+HEGRPH  D + 
Sbjct: 947  LSVREGDKKRIVDLAAKLQKFGFELDATHGTAVVLGEAGINPRLVNKVHEGRPHIQDRLK 1006

Query: 1106 NGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRS 1156
            NG+   +V T++G    + D   +RR  L YKV   TT++G  A A A+ +
Sbjct: 1007 NGEYAYIVNTTAGRQAIE-DSKLIRRSALQYKVHYDTTLNGGFATAMALNA 1056


>gi|292489399|ref|YP_003532286.1| carbamoyl-phosphate synthase large subunit [Erwinia amylovora
            CFBP1430]
 gi|292898382|ref|YP_003537751.1| carbamoyl-phosphate synthase large subunit [Erwinia amylovora ATCC
            49946]
 gi|428786363|ref|ZP_19003843.1| carbamoyl-phosphate synthase large chain [Erwinia amylovora ACW56400]
 gi|291198230|emb|CBJ45336.1| carbamoyl-phosphate synthase large chain [Erwinia amylovora ATCC
            49946]
 gi|291554833|emb|CBA22698.1| carbamoyl-phosphate synthase large chain [Erwinia amylovora CFBP1430]
 gi|312173564|emb|CBX81818.1| carbamoyl-phosphate synthase large chain [Erwinia amylovora ATCC
            BAA-2158]
 gi|426275209|gb|EKV52947.1| carbamoyl-phosphate synthase large chain [Erwinia amylovora ACW56400]
          Length = 1074

 Score = 1228 bits (3177), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 613/1077 (56%), Positives = 784/1077 (72%), Gaps = 19/1077 (1%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILILGAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  E+V +++EKERPDA+LPTMGGQTALN A+ L   G L ++GV +IGA  DA
Sbjct: 63   ATYIEPIHWEVVRKIIEKERPDAVLPTMGGQTALNCALELERQGVLAEFGVTMIGATADA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  F +AMK IG+ T  SGI +T++E +++A ++G FP IIRP+FT+GGTGGGI
Sbjct: 123  IDKAEDRQRFDKAMKKIGLDTARSGIAHTMEEALAVAADVG-FPCIIRPSFTMGGTGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEFE IC+ GL  S T+++L+++SL+GWKEYE+EV+RD  DN +I+CSIEN D MG
Sbjct: 182  AYNREEFEEICERGLDLSPTNELLIDESLIGWKEYEMEVVRDKNDNCIIVCSIENFDAMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            +HTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGVE GGSNVQF+VNP +G +++IEMN
Sbjct: 242  IHTGDSITVAPAQTLTDKEYQIMRNASMAVLREIGVETGGSNVQFSVNPENGRLIIIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKK-TPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT   TPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKIAAKLAVGYTLDELLNDITGGLTPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            F FEKF G+   LTTQMKSVGE MA+GRT QES QKALR LE G  G+            
Sbjct: 362  FNFEKFAGTNDRLTTQMKSVGEVMAIGRTLQESMQKALRGLEVGAHGFDPKVDLNDPEAL 421

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
              +++ L+    DR+  I  A + G+ V+++  L+ +D+WFL Q +EL+ +EQ L  Q V
Sbjct: 422  ATIRHELKDAGSDRIWYIADAFRAGLTVEDVFALTNVDRWFLVQIEELVQLEQQLAQQGV 481

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
            S +T D    +KR+GF+D +++      E E+R+ R    + P YKRVDTCAAEF  +T 
Sbjct: 482  SALTYDFLRTLKRKGFADARLSVLAGVPESEIRQLREQHNLHPVYKRVDTCAAEFSTDTA 541

Query: 627  YMYSSYDFECESAPTQ-KKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNS 685
            YMYS+Y+ ECE+ P Q + K+++LGGGPNRIGQGIEFDYCC H S +L+  G+ETIM+N 
Sbjct: 542  YMYSTYEEECEAHPNQDRDKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGFETIMVNC 601

Query: 686  NPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEH 745
            NPETVSTDYDTSDRLYFEP+T+EDVL ++ +E+P+G+IVQ+GGQTPLKL+          
Sbjct: 602  NPETVSTDYDTSDRLYFEPVTLEDVLEIVRIEQPKGVIVQYGGQTPLKLA---------- 651

Query: 746  RLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEI 805
            R   A+G   V + GTSPD+ID AEDRERF   ++ L ++QP      +   A+  A  I
Sbjct: 652  RALEAAG---VPVIGTSPDAIDRAEDRERFQQAVERLGLKQPANATVTAIDMAVEKAAII 708

Query: 806  GYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALA 865
            GYP+VVRPSYVLGGRAMEIVY +  L  Y   AV V  + PVL+D++L DA+E+DVDA+ 
Sbjct: 709  GYPLVVRPSYVLGGRAMEIVYDETDLKRYFNTAVSVSNDAPVLLDRFLDDAVEVDVDAIC 768

Query: 866  DSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMN 925
            D    V+IGGIMEHIEQAGVHSGDSAC +P  T+S+   D +     KLA  L V GLMN
Sbjct: 769  DG-EQVLIGGIMEHIEQAGVHSGDSACSLPAYTLSAEIQDVMRQQVEKLAFELGVRGLMN 827

Query: 926  CQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPK 985
             Q+A+  + +VYL+E NPRA+RTVPFVSKA G PLAK AA VM+GK+L   G T+E+IP 
Sbjct: 828  VQFAVKDN-EVYLIEVNPRAARTVPFVSKATGMPLAKVAARVMAGKTLAAQGVTREIIPP 886

Query: 986  HVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVF 1045
            + SVKE VLPF KFQG D +LGPEMRSTGEVMG+  +F  AF KA + A   +  SG   
Sbjct: 887  YYSVKEVVLPFNKFQGVDPILGPEMRSTGEVMGVGRTFAEAFCKAMLGAQSNMKKSGRAL 946

Query: 1046 LSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVA 1105
            LS+ +  K  +  +A+     GF++ +T+GTA  L+  GI V +V K+HEGRPH  D + 
Sbjct: 947  LSVREGDKKRIVELAQRLQAFGFELDATAGTASVLKAAGIEVRQVNKVHEGRPHIQDRLK 1006

Query: 1106 NGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTV 1162
            NG+   +V T++G    + D   +RR  L YKV   TT++G  A   ++ +  +  V
Sbjct: 1007 NGEYAYIVNTTAGRQAIE-DSKLIRRSALQYKVHYDTTLNGGFATTTSLNASATGQV 1062


>gi|378768595|ref|YP_005197068.1| carbamoyl-phosphate synthase large subunit [Pantoea ananatis LMG
            5342]
 gi|365188081|emb|CCF11031.1| carbamoyl-phosphate synthase large chain CarB [Pantoea ananatis LMG
            5342]
          Length = 1076

 Score = 1228 bits (3177), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 616/1071 (57%), Positives = 784/1071 (73%), Gaps = 19/1071 (1%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILILGAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  E+V +++EKERPDA+LPTMGGQTALN A+ L   G LE++GV +IGA  DA
Sbjct: 63   ATYIEPIHWEVVRKIIEKERPDAVLPTMGGQTALNCALELERQGVLEEFGVTMIGATADA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  F  AMK+IG+ T  SGI +T+DE +++A ++G FP IIRP+FT+GGTGGGI
Sbjct: 123  IDKAEDRRRFDVAMKSIGLDTARSGIAHTMDEALAVAADVG-FPCIIRPSFTMGGTGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEFE IC+ GL  S T+++L+++SL+GWKEYE+EV+RD  DN +I+CSIEN D MG
Sbjct: 182  AYNREEFEEICERGLDLSPTNELLIDESLIGWKEYEMEVVRDKNDNCIIVCSIENFDAMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            +HTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGVE GGSNVQFAVNP +G ++VIEMN
Sbjct: 242  IHTGDSITVAPAQTLTDKEYQIMRNASLAVLREIGVETGGSNVQFAVNPKNGRLIVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VG++LD++ NDIT  +TPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGFTLDELMNDITGGRTPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            F FEKF G+   LTTQMKSVGE MA+GRTFQES QKALR LE G +G+      +     
Sbjct: 362  FNFEKFAGANDRLTTQMKSVGEVMAIGRTFQESVQKALRGLEVGANGFDPKVHLDDAEAL 421

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
             +++  L+    DR+  I  A + GM VD +  L+ ID+WFL Q +EL+ +E+ +  + V
Sbjct: 422  TRIRRELKDAGSDRIWYIADAFRAGMSVDGVFNLTNIDRWFLVQIEELVRLEEQVAREGV 481

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
            + +  D    +KR+GF+D ++A      E E+R+ R    + P YKRVDTCAAEF  +T 
Sbjct: 482  NGLNADFLRTLKRKGFADARLASLVGVAEGEIRKLRQHHNLHPVYKRVDTCAAEFSTDTA 541

Query: 627  YMYSSYDFECESAPTQ-KKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNS 685
            YMYS+Y+ ECE+ P Q + K+++LGGGPNRIGQGIEFDYCC H + +L+  G+ETIM+N 
Sbjct: 542  YMYSTYEEECEANPNQDRDKIMVLGGGPNRIGQGIEFDYCCVHAALALREDGFETIMVNC 601

Query: 686  NPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEH 745
            NPETVSTDYDTSDRLYFEP+T+EDVL ++ +E+P+G+IVQ+GGQTPLKL+          
Sbjct: 602  NPETVSTDYDTSDRLYFEPVTLEDVLEIVRIEKPKGVIVQYGGQTPLKLA---------- 651

Query: 746  RLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEI 805
            R   A+G   V + GTSPD+ID AEDRERF   +  L+++QP      +   A+  A  I
Sbjct: 652  RALEAAG---VPVIGTSPDAIDRAEDRERFQQAVDRLNLKQPANATVATLEQAVEKAAGI 708

Query: 806  GYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALA 865
            GYP+VVRPSYVLGGRAMEIVY +  L  Y + AV V  + PVL+D++L DA+E+DVDA+ 
Sbjct: 709  GYPLVVRPSYVLGGRAMEIVYDEIDLKRYFQTAVSVSNDAPVLLDRFLDDAVEVDVDAIC 768

Query: 866  DSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMN 925
            D    V+IGGIMEHIEQAGVHSGDSAC +P  T+S    + +     KLA  LNV GLMN
Sbjct: 769  DG-ERVLIGGIMEHIEQAGVHSGDSACSLPAYTLSQDIQNVMRQQVEKLAFELNVRGLMN 827

Query: 926  CQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPK 985
             Q+A+  + +VYL+E NPRA+RTVPFVSKA G PLAK AA VM+GK+L + G T+EVIP 
Sbjct: 828  VQFAVKDN-EVYLIEVNPRAARTVPFVSKATGVPLAKVAARVMAGKTLAEQGVTEEVIPP 886

Query: 986  HVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVF 1045
            + SVKE VLPF KFQG D +LGPEMRSTGEVMG+  +F  AFAKA + A   +  +G   
Sbjct: 887  YYSVKEVVLPFNKFQGVDPILGPEMRSTGEVMGVGRTFAEAFAKAMLGAQSNMKKTGRAL 946

Query: 1046 LSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVA 1105
            LS+ +  K  +  +A      GF++ +T GTA  L   GI    V K+HEGRPH  D + 
Sbjct: 947  LSVREGDKKRIVDLAAKLQKFGFELDATHGTAVVLGEAGINPRLVNKVHEGRPHIQDRLK 1006

Query: 1106 NGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRS 1156
            NG+   +V T++G    + D   +RR  L YKV   TT++G  A A A+ +
Sbjct: 1007 NGEYAYIVNTTAGRQAIE-DSKLIRRSALQYKVHYDTTLNGGFATAMALNA 1056


>gi|114317126|gb|ABI63186.1| carbamoyl-phosphate synthase large chain [Granulibacter bethesdensis
            CGDNIH1]
          Length = 1101

 Score = 1228 bits (3177), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 627/1110 (56%), Positives = 798/1110 (71%), Gaps = 50/1110 (4%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD+R ILI+GAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP LAD
Sbjct: 12   KRTDIRSILIVGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPDLAD 71

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+TP++VE+++ KE+PDA+LPTMGGQTALN A+ L  SGALE++GVELIGAK D 
Sbjct: 72   ATYIEPITPDVVERIIAKEKPDAILPTMGGQTALNTAMQLHASGALERHGVELIGAKADV 131

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I +AEDR  F+ AM  IG+++P S I +TL+E       +G  P +IRP+FTLGGTGGGI
Sbjct: 132  IDRAEDRLKFRDAMDEIGIESPRSVIAHTLEEAREGLAHVG-LPAVIRPSFTLGGTGGGI 190

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYNKEEFE I  +GL AS T++VL+E+S+LGWKEYE+EV+RD ADN +IICSIEN+DPMG
Sbjct: 191  AYNKEEFEQIVTSGLDASPTTEVLIEESVLGWKEYEMEVVRDSADNCIIICSIENIDPMG 250

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDS+TVAPA TLTD+EYQR+RD SIA +R+IGV+ GGSNVQF VNP DG ++VIEMN
Sbjct: 251  VHTGDSVTVAPALTLTDREYQRMRDASIACLRKIGVDTGGSNVQFGVNPADGRMVVIEMN 310

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITK--------KTPASFEPSIDY 439
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDITK         TPASFEP+IDY
Sbjct: 311  PRVSRSSALASKATGFPIAKIAAKLAVGYTLDELANDITKMEIDGQLRTTPASFEPTIDY 370

Query: 440  VVTKIPRFAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNV 499
            VV K+PRF FEKFPG+  LL+T MKSVGEAMA+GR F E+ QKA RS+E G +G     +
Sbjct: 371  VVVKMPRFTFEKFPGTPALLSTSMKSVGEAMAIGRNFSEALQKAFRSMETGLNG-----L 425

Query: 500  KELDWDWE---QLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELID 556
             ++  D E     + +L  P PDR+     A++ G+ V++++     D WFL + ++++ 
Sbjct: 426  DDITLDGEGPDAFRAALSTPRPDRILVAAQALRHGLSVEDVNAACKFDPWFLREIQKIVT 485

Query: 557  VEQFLLTQSVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDT 616
             E  +    +   T+     +K  GFSD ++A  T  TE ++   R  LGV+P YKR+DT
Sbjct: 486  TEAHIRAHGLPENTR-SLRALKALGFSDARLAVLTGKTEADILAHREKLGVMPVYKRIDT 544

Query: 617  CAAEFEANTPYMYSSYDF-----ECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSF 671
            CA EF + T YMY +Y+       CES PT +KK++ILGGGPNRIGQGIEFDYCC H ++
Sbjct: 545  CAGEFASATSYMYGTYEGGFGAPSCESNPTDRKKIVILGGGPNRIGQGIEFDYCCVHAAY 604

Query: 672  SLQSAGYETIMMNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGI----IVQFG 727
            +L+ AG+ETIM+N NPETVSTDYDTSDRLYFEPLT EDV+N+I  E+  G     IVQ+G
Sbjct: 605  ALREAGFETIMVNCNPETVSTDYDTSDRLYFEPLTAEDVINLIRREQQSGTVLGCIVQYG 664

Query: 728  GQTPLKLSLPIHQYLDEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQP 787
            GQTPLKLS         H L  A     + I GTS D+IDAAEDRERF A++  LS+ QP
Sbjct: 665  GQTPLKLS---------HALSRAG----IPILGTSVDAIDAAEDRERFQALLNGLSLLQP 711

Query: 788  KGGIAKSEADALAIAKEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPV 847
            + GIA+S  +A AI   IGYPVV+RPSYVLGGRAMEIVY    L  Y+  AV V  + PV
Sbjct: 712  ENGIARSAQEAEAITARIGYPVVIRPSYVLGGRAMEIVYDHAGLNRYMREAVRVSGDNPV 771

Query: 848  LIDKYLSDAIEIDVDALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTI 907
            LID+YL+DAIE+DVD +AD    V + G+MEHIE+AG+HSGDSAC +P  ++S + +D +
Sbjct: 772  LIDRYLNDAIEVDVDCIADG-ERVYVAGVMEHIEEAGIHSGDSACSLPPYSLSPALVDEL 830

Query: 908  SSWTIKLAKRLNVCGLMNCQYAITTSGD----VYLLEANPRASRTVPFVSKAIGHPLAKY 963
             + T  LA+ L V GLMN Q+AI    D    +Y+LE NPRASRTVPFV+KA G  +AK 
Sbjct: 831  RAQTEALARGLQVIGLMNVQFAIKREADGSDRIYVLEVNPRASRTVPFVAKATGVAVAKI 890

Query: 964  AALVMSGKSLN--DLGFTKEVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDM 1021
             A VM+G  L   DLG T  +   HV+VKEAV PF +    D +LGPEM+STGEVMG+D 
Sbjct: 891  GARVMAGARLTEFDLGPTPRL--PHVAVKEAVFPFARLANVDTILGPEMKSTGEVMGLDT 948

Query: 1022 SFPIAFAKAQIAAGQKLPLSGTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLE 1081
            SF  AFAK+Q+ AG KLP SG VFLS+ D  K  L  +A+  +++GF++ +T GTA  L+
Sbjct: 949  SFERAFAKSQLGAGVKLPDSGRVFLSVRDTDKTALLPVARKLVELGFRLAATRGTAARLQ 1008

Query: 1082 LKGIAVERVLKMHEGRPHAGDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVI 1141
              G+ V+ + K+ EGRPH  D + +G IQ+++ T+SG +    D   +RR  L + VP  
Sbjct: 1009 EAGLEVKVLNKVLEGRPHCVDAIRSGDIQLIINTNSG-AQSVSDSFDIRRSALTHGVPNY 1067

Query: 1142 TTVSGALANAEAIRSLKSNTVTMTALQDFF 1171
            TT++GA A   AI +L+  T+ +  LQ +F
Sbjct: 1068 TTMAGARAAVHAIAALREGTLEVAPLQSYF 1097


>gi|16128027|ref|NP_414574.1| carbamoyl-phosphate synthase large subunit [Escherichia coli str.
            K-12 substr. MG1655]
 gi|170079696|ref|YP_001729016.1| carbamoyl phosphate synthase large subunit [Escherichia coli str.
            K-12 substr. DH10B]
 gi|238899438|ref|YP_002925234.1| carbamoyl phosphate synthase large subunit [Escherichia coli BW2952]
 gi|312970126|ref|ZP_07784308.1| carbamoyl-phosphate synthase large chain [Escherichia coli 1827-70]
 gi|386597069|ref|YP_006093469.1| carbamoyl-phosphate synthase large subunit [Escherichia coli DH1]
 gi|386703242|ref|YP_006167089.1| carbamoyl-phosphate synthase large chain [Escherichia coli P12b]
 gi|387619805|ref|YP_006127432.1| carbamoyl phosphate synthase large subunit [Escherichia coli DH1]
 gi|388476155|ref|YP_488339.1| carbamoyl-phosphate synthase large subunit [Escherichia coli str.
            K-12 substr. W3110]
 gi|417273612|ref|ZP_12060957.1| carbamoyl-phosphate synthase, large subunit [Escherichia coli 2.4168]
 gi|417946473|ref|ZP_12589690.1| carbamoyl phosphate synthase large subunit [Escherichia coli XH140A]
 gi|417976055|ref|ZP_12616851.1| carbamoyl phosphate synthase large subunit [Escherichia coli XH001]
 gi|418959480|ref|ZP_13511378.1| carbamoyl-phosphate synthase large chain [Escherichia coli J53]
 gi|432578751|ref|ZP_19815187.1| carbamoyl-phosphate synthase large chain [Escherichia coli KTE56]
 gi|450237843|ref|ZP_21898727.1| carbamoyl phosphate synthase large subunit [Escherichia coli S17]
 gi|115627|sp|P00968.2|CARB_ECOLI RecName: Full=Carbamoyl-phosphate synthase large chain; AltName:
            Full=Carbamoyl-phosphate synthetase ammonia chain
 gi|3318817|pdb|1JDB|B Chain B, Carbamoyl Phosphate Synthetase From Escherichia Coli
 gi|3318821|pdb|1JDB|E Chain E, Carbamoyl Phosphate Synthetase From Escherichia Coli
 gi|3318825|pdb|1JDB|H Chain H, Carbamoyl Phosphate Synthetase From Escherichia Coli
 gi|3318829|pdb|1JDB|K Chain K, Carbamoyl Phosphate Synthetase From Escherichia Coli
 gi|4929935|pdb|1BXR|A Chain A, Structure Of Carbamoyl Phosphate Synthetase Complexed With
            The Atp Analog Amppnp
 gi|4929937|pdb|1BXR|C Chain C, Structure Of Carbamoyl Phosphate Synthetase Complexed With
            The Atp Analog Amppnp
 gi|4929939|pdb|1BXR|E Chain E, Structure Of Carbamoyl Phosphate Synthetase Complexed With
            The Atp Analog Amppnp
 gi|4929941|pdb|1BXR|G Chain G, Structure Of Carbamoyl Phosphate Synthetase Complexed With
            The Atp Analog Amppnp
 gi|6730116|pdb|1C30|A Chain A, Crystal Structure Of Carbamoyl Phosphate Synthetase: Small
            Subunit Mutation C269s
 gi|6730118|pdb|1C30|C Chain C, Crystal Structure Of Carbamoyl Phosphate Synthetase: Small
            Subunit Mutation C269s
 gi|6730120|pdb|1C30|E Chain E, Crystal Structure Of Carbamoyl Phosphate Synthetase: Small
            Subunit Mutation C269s
 gi|6730122|pdb|1C30|G Chain G, Crystal Structure Of Carbamoyl Phosphate Synthetase: Small
            Subunit Mutation C269s
 gi|6730126|pdb|1C3O|A Chain A, Crystal Structure Of The Carbamoyl Phosphate Synthetase:
            Small Subunit Mutant C269s With Bound Glutamine
 gi|6730128|pdb|1C3O|C Chain C, Crystal Structure Of The Carbamoyl Phosphate Synthetase:
            Small Subunit Mutant C269s With Bound Glutamine
 gi|6730130|pdb|1C3O|E Chain E, Crystal Structure Of The Carbamoyl Phosphate Synthetase:
            Small Subunit Mutant C269s With Bound Glutamine
 gi|6730132|pdb|1C3O|G Chain G, Crystal Structure Of The Carbamoyl Phosphate Synthetase:
            Small Subunit Mutant C269s With Bound Glutamine
 gi|6730187|pdb|1CS0|A Chain A, Crystal Structure Of Carbamoyl Phosphate Synthetase
            Complexed At Cys269 In The Small Subunit With The
            Tetrahedral Mimic L-glutamate Gamma-semialdehyde
 gi|6730189|pdb|1CS0|C Chain C, Crystal Structure Of Carbamoyl Phosphate Synthetase
            Complexed At Cys269 In The Small Subunit With The
            Tetrahedral Mimic L-glutamate Gamma-semialdehyde
 gi|6730191|pdb|1CS0|E Chain E, Crystal Structure Of Carbamoyl Phosphate Synthetase
            Complexed At Cys269 In The Small Subunit With The
            Tetrahedral Mimic L-glutamate Gamma-semialdehyde
 gi|6730193|pdb|1CS0|G Chain G, Crystal Structure Of Carbamoyl Phosphate Synthetase
            Complexed At Cys269 In The Small Subunit With The
            Tetrahedral Mimic L-glutamate Gamma-semialdehyde
 gi|18158903|pdb|1KEE|A Chain A, Inactivation Of The Amidotransferase Activity Of Carbamoyl
            Phosphate Synthetase By The Antibiotic Acivicin
 gi|18158905|pdb|1KEE|C Chain C, Inactivation Of The Amidotransferase Activity Of Carbamoyl
            Phosphate Synthetase By The Antibiotic Acivicin
 gi|18158907|pdb|1KEE|E Chain E, Inactivation Of The Amidotransferase Activity Of Carbamoyl
            Phosphate Synthetase By The Antibiotic Acivicin
 gi|18158909|pdb|1KEE|G Chain G, Inactivation Of The Amidotransferase Activity Of Carbamoyl
            Phosphate Synthetase By The Antibiotic Acivicin
 gi|55669821|pdb|1T36|A Chain A, Crystal Structure Of E. Coli Carbamoyl Phosphate Synthetase
            Small Subunit Mutant C248d Complexed With Uridine
            5'-Monophosphate
 gi|55669823|pdb|1T36|C Chain C, Crystal Structure Of E. Coli Carbamoyl Phosphate Synthetase
            Small Subunit Mutant C248d Complexed With Uridine
            5'-Monophosphate
 gi|55669825|pdb|1T36|E Chain E, Crystal Structure Of E. Coli Carbamoyl Phosphate Synthetase
            Small Subunit Mutant C248d Complexed With Uridine
            5'-Monophosphate
 gi|55669827|pdb|1T36|G Chain G, Crystal Structure Of E. Coli Carbamoyl Phosphate Synthetase
            Small Subunit Mutant C248d Complexed With Uridine
            5'-Monophosphate
 gi|41079|emb|CAA24744.1| unnamed protein product [Escherichia coli K-12]
 gi|145464|gb|AAA23539.1| carbamoyl-phosphate synthetase subunit B [Escherichia coli]
 gi|1786216|gb|AAC73144.1| carbamoyl-phosphate synthase large subunit [Escherichia coli str.
            K-12 substr. MG1655]
 gi|21321915|dbj|BAB96602.1| carbamoyl-phosphate synthase large subunit [Escherichia coli str. K12
            substr. W3110]
 gi|169887531|gb|ACB01238.1| carbamoyl-phosphate synthase large subunit [Escherichia coli str.
            K-12 substr. DH10B]
 gi|238860105|gb|ACR62103.1| carbamoyl-phosphate synthase large subunit [Escherichia coli BW2952]
 gi|260450758|gb|ACX41180.1| carbamoyl-phosphate synthase, large subunit [Escherichia coli DH1]
 gi|310337624|gb|EFQ02735.1| carbamoyl-phosphate synthase large chain [Escherichia coli 1827-70]
 gi|315134728|dbj|BAJ41887.1| carbamoyl phosphate synthase large subunit [Escherichia coli DH1]
 gi|342361815|gb|EGU25945.1| carbamoyl phosphate synthase large subunit [Escherichia coli XH140A]
 gi|344194453|gb|EGV48527.1| carbamoyl phosphate synthase large subunit [Escherichia coli XH001]
 gi|359330899|dbj|BAL37346.1| carbamoyl-phosphate synthase large subunit [Escherichia coli str.
            K-12 substr. MDS42]
 gi|383101410|gb|AFG38919.1| Carbamoyl-phosphate synthase large chain [Escherichia coli P12b]
 gi|384377701|gb|EIE35594.1| carbamoyl-phosphate synthase large chain [Escherichia coli J53]
 gi|386233794|gb|EII65774.1| carbamoyl-phosphate synthase, large subunit [Escherichia coli 2.4168]
 gi|431109707|gb|ELE13657.1| carbamoyl-phosphate synthase large chain [Escherichia coli KTE56]
 gi|449325904|gb|EMD15800.1| carbamoyl phosphate synthase large subunit [Escherichia coli S17]
          Length = 1073

 Score = 1228 bits (3177), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 619/1071 (57%), Positives = 782/1071 (73%), Gaps = 19/1071 (1%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILILGAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  E+V +++EKERPDA+LPTMGGQTALN A+ L   G LE++GV +IGA  DA
Sbjct: 63   ATYIEPIHWEVVRKIIEKERPDAVLPTMGGQTALNCALELERQGVLEEFGVTMIGATADA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  F  AMK IG++T  SGI +T++E +++A ++G FP IIRP+FT+GG+GGGI
Sbjct: 123  IDKAEDRRRFDVAMKKIGLETARSGIAHTMEEALAVAADVG-FPCIIRPSFTMGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEFE IC  GL  S T ++L+++SL+GWKEYE+EV+RD  DN +I+CSIEN D MG
Sbjct: 182  AYNREEFEEICARGLDLSPTKELLIDESLIGWKEYEMEVVRDKNDNCIIVCSIENFDAMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            +HTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGVE GGSNVQFAVNP +G ++VIEMN
Sbjct: 242  IHTGDSITVAPAQTLTDKEYQIMRNASMAVLREIGVETGGSNVQFAVNPKNGRLIVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT  +TPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGYTLDELMNDITGGRTPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            F FEKF G+   LTTQMKSVGE MA+GRT QES QKALR LE G +G+      +     
Sbjct: 362  FNFEKFAGANDRLTTQMKSVGEVMAIGRTQQESLQKALRGLEVGATGFDPKVSLDDPEAL 421

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
             +++  L+    DR+  I  A + G+ VD +  L+ ID+WFL Q +EL+ +E+ +    +
Sbjct: 422  TKIRRELKDAGADRIWYIADAFRAGLSVDGVFNLTNIDRWFLVQIEELVRLEEKVAEVGI 481

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
            + +  D   ++KR+GF+D ++A      E E+R+ R    + P YKRVDTCAAEF  +T 
Sbjct: 482  TGLNADFLRQLKRKGFADARLAKLAGVREAEIRKLRDQYDLHPVYKRVDTCAAEFATDTA 541

Query: 627  YMYSSYDFECESAP-TQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNS 685
            YMYS+Y+ ECE+ P T ++K+++LGGGPNRIGQGIEFDYCC H S +L+  GYETIM+N 
Sbjct: 542  YMYSTYEEECEANPSTDREKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVNC 601

Query: 686  NPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEH 745
            NPETVSTDYDTSDRLYFEP+T+EDVL ++ +E+P+G+IVQ+GGQTPLKL+          
Sbjct: 602  NPETVSTDYDTSDRLYFEPVTLEDVLEIVRIEKPKGVIVQYGGQTPLKLA---------- 651

Query: 746  RLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEI 805
            R   A+G   V + GTSPD+ID AEDRERF   ++ L ++QP      +   A+  AKEI
Sbjct: 652  RALEAAG---VPVIGTSPDAIDRAEDRERFQHAVERLKLKQPANATVTAIEMAVEKAKEI 708

Query: 806  GYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALA 865
            GYP+VVRPSYVLGGRAMEIVY +  L  Y + AV V  + PVL+D +L DA+E+DVDA+ 
Sbjct: 709  GYPLVVRPSYVLGGRAMEIVYDEADLRRYFQTAVSVSNDAPVLLDHFLDDAVEVDVDAIC 768

Query: 866  DSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMN 925
            D    V+IGGIMEHIEQAGVHSGDSAC +P  T+S    D +     KLA  L V GLMN
Sbjct: 769  DG-EMVLIGGIMEHIEQAGVHSGDSACSLPAYTLSQEIQDVMRQQVQKLAFELQVRGLMN 827

Query: 926  CQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPK 985
             Q+A+  + +VYL+E NPRA+RTVPFVSKA G PLAK AA VM+GKSL + G TKEVIP 
Sbjct: 828  VQFAVKNN-EVYLIEVNPRAARTVPFVSKATGVPLAKVAARVMAGKSLAEQGVTKEVIPP 886

Query: 986  HVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVF 1045
            + SVKE VLPF KF G D LLGPEMRSTGEVMG+  +F  AFAKAQ+ +   +   G   
Sbjct: 887  YYSVKEVVLPFNKFPGVDPLLGPEMRSTGEVMGVGRTFAEAFAKAQLGSNSTMKKHGRAL 946

Query: 1046 LSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVA 1105
            LS+ +  K  +  +A   L  GF++ +T GTA  L   GI    V K+HEGRPH  D + 
Sbjct: 947  LSVREGDKERVVDLAAKLLKQGFELDATHGTAIVLGEAGINPRLVNKVHEGRPHIQDRIK 1006

Query: 1106 NGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRS 1156
            NG+   ++ T+SG    + D   +RR  L YKV   TT++G  A A A+ +
Sbjct: 1007 NGEYTYIINTTSGRRAIE-DSRVIRRSALQYKVHYDTTLNGGFATAMALNA 1056


>gi|149190314|ref|ZP_01868587.1| carbamoyl-phosphate synthase large subunit [Vibrio shilonii AK1]
 gi|148835803|gb|EDL52767.1| carbamoyl-phosphate synthase large subunit [Vibrio shilonii AK1]
          Length = 1074

 Score = 1228 bits (3177), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 616/1079 (57%), Positives = 784/1079 (72%), Gaps = 22/1079 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILILGAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPDMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  E+V  ++ KERPDA+LPTMGGQTALN A+ L + G LE++GVE+IGA  DA
Sbjct: 63   ATYIEPIQWEVVRNIIAKERPDAVLPTMGGQTALNCALDLEKHGVLEEFGVEMIGATADA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  F +AMK+IG++ P +    T++E  ++ + +G FP IIRP+FT+GGTGGGI
Sbjct: 123  IDKAEDRSRFDKAMKSIGLECPRADTAKTMEEAYAVLDMVG-FPCIIRPSFTMGGTGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYNKEEFE IC+ GL  S T+++L+++SL+GWKEYE+EV+RD ADN +I+C+IEN DPMG
Sbjct: 182  AYNKEEFEEICRRGLDLSPTNELLIDESLIGWKEYEMEVVRDKADNCIIVCAIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            +HTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGVE GGSNVQF +NP DG +++IEMN
Sbjct: 242  IHTGDSITVAPAQTLTDKEYQLMRNASLAVLREIGVETGGSNVQFGINPKDGRMVIIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VG++LD++ NDIT   TPASFEP+IDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKIAAKLAVGFTLDELMNDITGGATPASFEPTIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWD- 505
            F FEKF G+   LTTQMKSVGE MA+GR  QES QKALR LE G +G+    + +LD   
Sbjct: 362  FNFEKFAGANDRLTTQMKSVGEVMAIGRNQQESLQKALRGLEVGATGF--DEMVDLDAPD 419

Query: 506  -WEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQ 564
               ++++ L+    +R+  I  A + G+ VD +  L+ ID+WFL Q +E++ +EQ L ++
Sbjct: 420  ALSKIRHELKEAGAERIWYIADAFRAGLSVDGVFNLTQIDRWFLVQIEEIVKLEQELRSK 479

Query: 565  SVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEAN 624
              + + K +  ++KR+GF+D +++      E E+R  R    + P YKRVDTCAAEF ++
Sbjct: 480  GFAGLDKQELNKLKRKGFADARLSKILGVAESEIRRLRDQYDIHPVYKRVDTCAAEFSSD 539

Query: 625  TPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMN 684
            T YMYSSYD ECE+ PT K K++ILGGGPNRIGQGIEFDYCC H S +L+  GYETIM+N
Sbjct: 540  TAYMYSSYDDECEANPTDKDKIMILGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVN 599

Query: 685  SNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDE 744
             NPETVSTDYDTSDRLYFEP+T+EDVL +  +E+P+G+IVQ+GGQTPLKL+         
Sbjct: 600  CNPETVSTDYDTSDRLYFEPVTLEDVLAIARVEKPKGVIVQYGGQTPLKLA--------- 650

Query: 745  HRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKE 804
             R   A+G   V I GTSPD+ID AEDRERF   +  L + QP+     +   A+  ++E
Sbjct: 651  -RALEAAG---VPIIGTSPDAIDRAEDRERFQVAVDRLGLLQPENATVTTMEQAVEKSRE 706

Query: 805  IGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDAL 864
            IG+P+VVRPSYVLGGRAMEIVY ++ L  Y   AV V  E PVL+D +L DA+E+D+DAL
Sbjct: 707  IGFPLVVRPSYVLGGRAMEIVYDEQDLRRYFNEAVSVSNESPVLLDSFLDDAVEVDIDAL 766

Query: 865  ADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLM 924
             D    VVIGGIMEHIEQAGVHSGDSAC +P  T+S    DT+     KLA  L V GLM
Sbjct: 767  CDG-ERVVIGGIMEHIEQAGVHSGDSACSLPAYTLSQEIQDTMREQVEKLAFELGVRGLM 825

Query: 925  NCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIP 984
            N Q+A+  +  VYL+E NPRA+RTVPFVSKA G P+AK AA VM+G+SL   GFTKE+IP
Sbjct: 826  NTQFAVKNN-KVYLIEVNPRAARTVPFVSKATGAPIAKIAARVMAGQSLESQGFTKEIIP 884

Query: 985  KHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTV 1044
             + SVKE VLPF KF G D LLGPEMRSTGEVMG+  +F  A+AKA++  G   P  G  
Sbjct: 885  PYYSVKEVVLPFNKFPGVDPLLGPEMRSTGEVMGVGATFAEAYAKAELGCGNVYPEGGRA 944

Query: 1045 FLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMV 1104
             LS+ +  K  +  +A     +G+++ +T GTA  L   GI    V K+HEGRPH  D +
Sbjct: 945  LLSVREGDKERVVDLASKLTKLGYQLDATHGTAVILGEAGINPRLVNKVHEGRPHILDRI 1004

Query: 1105 ANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTVT 1163
             N +   +V T++G    + D   LRR  LA KV   TT++ A A   +  +   +TVT
Sbjct: 1005 KNNEYTYIVNTAAGRQAIE-DSKVLRRGALAEKVNYTTTLNAAFATCMSHTADAKSTVT 1062



 Score =  252 bits (643), Expect = 9e-64,   Method: Compositional matrix adjust.
 Identities = 163/429 (37%), Positives = 242/429 (56%), Gaps = 26/429 (6%)

Query: 67  KIDS-SAELSNGAA----SSKDQKLGKRTDLRKILILGAGPIVIGQACEFDYSGTQACKA 121
           ++D+ +AE S+  A    S  D+     TD  KI+ILG GP  IGQ  EFDY    A  A
Sbjct: 528 RVDTCAAEFSSDTAYMYSSYDDECEANPTDKDKIMILGGGPNRIGQGIEFDYCCVHASLA 587

Query: 122 LKEEGYEVILINSNPATIMTDPGLADRTYITPMTPELVEQVLEKERPDALLPTMGGQTAL 181
           L+E+GYE I++N NP T+ TD   +DR Y  P+T E V  +   E+P  ++   GGQT L
Sbjct: 588 LREDGYETIMVNCNPETVSTDYDTSDRLYFEPVTLEDVLAIARVEKPKGVIVQYGGQTPL 647

Query: 182 NLAVALAESGALEKYGVELIGAKLDAIKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECI 241
            LA       ALE  GV +IG   DAI +AEDR+ F+ A+  +G+  P +    T+++ +
Sbjct: 648 KLA------RALEAAGVPIIGTSPDAIDRAEDRERFQVAVDRLGLLQPENATVTTMEQAV 701

Query: 242 SIANEIGEFPLIIRPAFTLGGTGGGIAYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKE 301
             + EIG FPL++RP++ LGG    I Y++++        ++ S  S VL++  L    E
Sbjct: 702 EKSREIG-FPLVVRPSYVLGGRAMEIVYDEQDLRRYFNEAVSVSNESPVLLDSFLDDAVE 760

Query: 302 YELEVMRDLADNVVIICSIENVDPMGVHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREI 361
            +++ + D  + VVI   +E+++  GVH+GDS    PA TL+ +    +R+    +  E+
Sbjct: 761 VDIDALCD-GERVVIGGIMEHIEQAGVHSGDSACSLPAYTLSQEIQDTMREQVEKLAFEL 819

Query: 362 GVECGGSNVQFAVNPVDGEVMVIEMNPRVSRSSALASKATGFPIAKMAAKLSVGYSLDQI 421
           GV  G  N QFAV   + +V +IE+NPR +R+    SKATG PIAK+AA++  G SL+  
Sbjct: 820 GVR-GLMNTQFAVK--NNKVYLIEVNPRAARTVPFVSKATGAPIAKIAARVMAGQSLES- 875

Query: 422 PNDITKKTPASFEPSIDYVVTKIPRFAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQ 481
               TK+    +     Y V ++    F KFPG +PLL  +M+S GE M +G TF E++ 
Sbjct: 876 -QGFTKEIIPPY-----YSVKEVV-LPFNKFPGVDPLLGPEMRSTGEVMGVGATFAEAYA 928

Query: 482 KALRSLECG 490
           KA   L CG
Sbjct: 929 KA--ELGCG 935


>gi|261346436|ref|ZP_05974080.1| carbamoyl-phosphate synthase, large subunit [Providencia rustigianii
            DSM 4541]
 gi|282565419|gb|EFB70954.1| carbamoyl-phosphate synthase, large subunit [Providencia rustigianii
            DSM 4541]
          Length = 1073

 Score = 1228 bits (3177), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 619/1068 (57%), Positives = 778/1068 (72%), Gaps = 19/1068 (1%)

Query: 86   LGKRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGL 145
            + KRTD++ ILILGAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +
Sbjct: 1    MAKRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEM 60

Query: 146  ADRTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKL 205
            AD TYI P+  E+V +++EKERPDA+LPTMGGQTALN A+ L   G L ++GV +IGA  
Sbjct: 61   ADATYIEPIHWEVVRKIIEKERPDAVLPTMGGQTALNCALELERKGVLAEFGVTMIGATA 120

Query: 206  DAIKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGG 265
            DAI KAEDR  F +AMK IG+ T  SGI +T++E  ++A+++G FP IIRP+FT+GG+GG
Sbjct: 121  DAIDKAEDRQRFDKAMKKIGLGTARSGIAHTMEEAYAVADDVG-FPCIIRPSFTMGGSGG 179

Query: 266  GIAYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDP 325
            GIAYN+EEFE IC  GL  S T+++L+++SL+GWKEYE+EV+RD  DN +I+CSIEN D 
Sbjct: 180  GIAYNREEFEEICTRGLDLSPTNELLIDESLIGWKEYEMEVVRDKKDNCIIVCSIENFDA 239

Query: 326  MGVHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIE 385
            MG+HTGDSITVAPAQTLTDKEYQ +RD S+A++REIGVE GGSNVQFAVNP DG ++VIE
Sbjct: 240  MGIHTGDSITVAPAQTLTDKEYQIMRDASMAVLREIGVETGGSNVQFAVNPKDGRLIVIE 299

Query: 386  MNPRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKI 444
            MNPRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT  +TPASFEPSIDYVVTKI
Sbjct: 300  MNPRVSRSSALASKATGFPIAKIAAKLAVGYTLDELMNDITGGRTPASFEPSIDYVVTKI 359

Query: 445  PRFAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDW 504
            PRF FEKF GS   LTTQMKSVGE MA+GRTFQES QKALR LE G +G+     ++   
Sbjct: 360  PRFNFEKFAGSNDRLTTQMKSVGEVMAIGRTFQESMQKALRGLEVGATGFDPKVSQDDPE 419

Query: 505  DWEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQ 564
               +++  L+    DR+  I  A + G+ VD I  L+ ID+WFL Q +EL+ +E  +   
Sbjct: 420  SLTRIRRELKDAGSDRIWYIADAFRAGLSVDGIFNLTNIDRWFLVQIEELVRLENEVAEL 479

Query: 565  SVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEAN 624
             ++ + K+    +KR+GF+D ++A     +E E+R+ R    + P YKRVDTCAAEF  +
Sbjct: 480  GINGLNKEFLRHLKRKGFADARLASLVGVSETELRKLRQGYDLHPVYKRVDTCAAEFATD 539

Query: 625  TPYMYSSYDFECESAPTQKK-KVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMM 683
            T YMYS+Y+ ECES P   K K+++LGGGPNRIGQGIEFDYCC H S +L+  GYETIM+
Sbjct: 540  TAYMYSTYEEECESNPNNDKPKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMV 599

Query: 684  NSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLD 743
            N NPETVSTDYDTSDRLYFE +T+EDVL ++ +E+P+G+IVQ+GGQTPLKL+        
Sbjct: 600  NCNPETVSTDYDTSDRLYFESVTLEDVLEIVRIEQPQGVIVQYGGQTPLKLA-------- 651

Query: 744  EHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAK 803
              R   A+G   V I GTSPD+ID AEDRERF   +  L+++QPK     +   A+  A 
Sbjct: 652  --RALEAAG---VPIIGTSPDAIDRAEDRERFQQAVNRLNLKQPKNATVATIEQAVEKAA 706

Query: 804  EIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDA 863
             IGYP+VVRPSYVLGGRAMEIVY +  L  Y +NAV V  + PVL+D++L DAIE+DVDA
Sbjct: 707  GIGYPLVVRPSYVLGGRAMEIVYDEVDLRRYFQNAVSVSNDAPVLLDRFLDDAIEVDVDA 766

Query: 864  LADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGL 923
            + D    V+IGGIMEHIEQAGVHSGDSAC +P  T+S    D +      LA  L V GL
Sbjct: 767  ICDG-EMVLIGGIMEHIEQAGVHSGDSACSLPAYTLSQEIQDVMREQVRNLAFELRVRGL 825

Query: 924  MNCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVI 983
            MN Q+A+  + +VYL+E NPRA+RTVPFVSKA G PLAK AA VM+G++L   G T+EVI
Sbjct: 826  MNVQFAVKNN-EVYLIEVNPRAARTVPFVSKATGVPLAKVAARVMAGQTLTQQGVTEEVI 884

Query: 984  PKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGT 1043
            P + SVKE VLPF KFQG D +LGPEMRSTGEVMG+  +F  AFAKA + +   +  SG 
Sbjct: 885  PPYYSVKEVVLPFNKFQGVDPILGPEMRSTGEVMGVGRTFAEAFAKAMLGSSSTMKKSGR 944

Query: 1044 VFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDM 1103
              LS+ +  K  +  +A   L  GF++ +T GTA  L   GI    V K+HEGRPH  D 
Sbjct: 945  ALLSVREGDKTRVVDLAAKLLKHGFELDATHGTAIVLGEAGINPRLVNKVHEGRPHIQDR 1004

Query: 1104 VANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANA 1151
            + NG+   +V T++G    + D   +R   L YKV   TT++G  A A
Sbjct: 1005 IKNGEYDYIVNTTAGRQAIE-DSKLIRGSALRYKVHYDTTLNGGFATA 1051


>gi|110640245|ref|YP_667973.1| carbamoyl phosphate synthase large subunit [Escherichia coli 536]
 gi|191174098|ref|ZP_03035612.1| carbamoyl-phosphate synthase, large subunit [Escherichia coli F11]
 gi|432468954|ref|ZP_19711018.1| carbamoyl-phosphate synthase large chain [Escherichia coli KTE205]
 gi|432469363|ref|ZP_19711419.1| carbamoyl-phosphate synthase large chain [Escherichia coli KTE206]
 gi|432581223|ref|ZP_19817642.1| carbamoyl-phosphate synthase large chain [Escherichia coli KTE57]
 gi|432711718|ref|ZP_19946773.1| carbamoyl-phosphate synthase large chain [Escherichia coli KTE8]
 gi|433075880|ref|ZP_20262492.1| carbamoyl-phosphate synthase large chain [Escherichia coli KTE129]
 gi|433076188|ref|ZP_20262769.1| carbamoyl-phosphate synthase large chain [Escherichia coli KTE131]
 gi|433123192|ref|ZP_20308827.1| carbamoyl-phosphate synthase large chain [Escherichia coli KTE157]
 gi|433186384|ref|ZP_20370592.1| carbamoyl-phosphate synthase large chain [Escherichia coli KTE85]
 gi|110341837|gb|ABG68074.1| carbamoyl-phosphate synthase large chain [Escherichia coli 536]
 gi|190905592|gb|EDV65217.1| carbamoyl-phosphate synthase, large subunit [Escherichia coli F11]
 gi|430988556|gb|ELD05049.1| carbamoyl-phosphate synthase large chain [Escherichia coli KTE205]
 gi|431001341|gb|ELD16924.1| carbamoyl-phosphate synthase large chain [Escherichia coli KTE206]
 gi|431123363|gb|ELE26103.1| carbamoyl-phosphate synthase large chain [Escherichia coli KTE57]
 gi|431260712|gb|ELF52807.1| carbamoyl-phosphate synthase large chain [Escherichia coli KTE8]
 gi|431579081|gb|ELI51666.1| carbamoyl-phosphate synthase large chain [Escherichia coli KTE129]
 gi|431603688|gb|ELI73111.1| carbamoyl-phosphate synthase large chain [Escherichia coli KTE131]
 gi|431636625|gb|ELJ04755.1| carbamoyl-phosphate synthase large chain [Escherichia coli KTE157]
 gi|431698798|gb|ELJ63823.1| carbamoyl-phosphate synthase large chain [Escherichia coli KTE85]
          Length = 1072

 Score = 1228 bits (3177), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 617/1070 (57%), Positives = 781/1070 (72%), Gaps = 18/1070 (1%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILILGAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  E+V +++EKERPDA+LPTMGGQTALN A+ L   G LE++GV +IGA  DA
Sbjct: 63   ATYIEPIHWEVVRKIIEKERPDAVLPTMGGQTALNCALELERQGVLEEFGVTMIGATADA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  F  AMK IG++T  SGI ++++E +++A E+G FP IIRP+FT+GG+GGGI
Sbjct: 123  IDKAEDRRRFDVAMKKIGLETARSGIAHSMEEALAVAAEVG-FPCIIRPSFTMGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEFE IC  GL  S T ++L+++SL+GWKEYE+EV+RD  DN +I+CSIEN D MG
Sbjct: 182  AYNREEFEEICARGLDLSPTKELLIDESLIGWKEYEMEVVRDKNDNCIIVCSIENFDAMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            +HTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGVE GGSNVQFAVNP +G ++VIEMN
Sbjct: 242  IHTGDSITVAPAQTLTDKEYQIMRNASMAVLREIGVETGGSNVQFAVNPKNGRLIVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT  +TPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGYTLDELMNDITGGRTPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            F FEKF G+   LTTQMKSVGE MA+GRT QES QKALR LE G +G+      +     
Sbjct: 362  FNFEKFAGANDRLTTQMKSVGEVMAIGRTQQESLQKALRGLEVGATGFDPKVSLDDPEAL 421

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
             +++  L+    +R+  I  A + G+ VD +  L+ ID+WFL Q +EL+ +E+ +    +
Sbjct: 422  TKIRRELKDAGAERIWYIADAFRAGLSVDGVFNLTNIDRWFLVQIEELVRLEEKVAEVGI 481

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
            + +  +   ++KR+GF+D ++A      E E+R+ R    + P YKRVDTCAAEF  +T 
Sbjct: 482  TGLHAEFLRQLKRKGFADARLAKLAGVREAEIRKLRDQYDLHPVYKRVDTCAAEFATDTA 541

Query: 627  YMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSN 686
            YMYS+Y+ ECES P+ + K+++LGGGPNRIGQGIEFDYCC H S +L+  GYETIM+N N
Sbjct: 542  YMYSTYEEECESNPSDRDKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVNCN 601

Query: 687  PETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHR 746
            PETVSTDYDTSDRLYFEP+T+EDVL ++ +E+P+G+IVQ+GGQTPLKL+          R
Sbjct: 602  PETVSTDYDTSDRLYFEPVTLEDVLEIVRIEKPKGVIVQYGGQTPLKLA----------R 651

Query: 747  LPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEIG 806
               A+G   V + GTSPD+ID AEDRERF   ++ L ++QP      +   A+  AKEIG
Sbjct: 652  ALEAAG---VPVIGTSPDAIDRAEDRERFQHAVERLKLKQPANATVTTIEMAVEKAKEIG 708

Query: 807  YPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALAD 866
            YP+VVRPSYVLGGRAMEIVY +  L  Y + AV V  + PVL+D +L DA+E+DVDA+ D
Sbjct: 709  YPLVVRPSYVLGGRAMEIVYDEADLRRYFQTAVSVSNDAPVLLDHFLDDAVEVDVDAICD 768

Query: 867  SCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNC 926
                V+IGGIMEHIEQAGVHSGDSAC +P  T+S    D +     KLA  L V GLMN 
Sbjct: 769  G-EMVLIGGIMEHIEQAGVHSGDSACSLPAYTLSQEIQDVMRQQVQKLAFELQVRGLMNV 827

Query: 927  QYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPKH 986
            Q+A+  + +VYL+E NPRA+RTVPFVSKA G PLAK AA VM+GKSL + G TKEVIP +
Sbjct: 828  QFAVKNN-EVYLIEVNPRAARTVPFVSKATGVPLAKVAARVMAGKSLAEQGVTKEVIPPY 886

Query: 987  VSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVFL 1046
             SVKE VLPF KF G D LLGPEMRSTGEVMG+  +F  AFAKAQ+ +   +   G   L
Sbjct: 887  YSVKEVVLPFNKFPGVDPLLGPEMRSTGEVMGVGRTFAEAFAKAQLGSNSTMKKHGRALL 946

Query: 1047 SLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVAN 1106
            S+ +  K  +  +A   L  GF++ +T GTA  L   GI    V K+HEGRPH  D + N
Sbjct: 947  SVREGDKERVVDLAAKLLKQGFELDATHGTAIVLGEAGINPRLVNKVHEGRPHIQDRIKN 1006

Query: 1107 GQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRS 1156
            G+   ++ T+SG    + D   +RR  L YKV   TT++G  A A A+ +
Sbjct: 1007 GEYTYIINTTSGRRAIE-DSRVIRRSALQYKVHYDTTLNGGFATAMALNA 1055


>gi|407773431|ref|ZP_11120732.1| carbamoyl phosphate synthase large subunit [Thalassospira
            profundimaris WP0211]
 gi|407283895|gb|EKF09423.1| carbamoyl phosphate synthase large subunit [Thalassospira
            profundimaris WP0211]
          Length = 1080

 Score = 1228 bits (3177), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 624/1095 (56%), Positives = 790/1095 (72%), Gaps = 32/1095 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILI+GAGPIVIGQACEFDYSG QACKALKEEGY VIL+NSNPATIMTDP LAD
Sbjct: 3    KRTDIKSILIIGAGPIVIGQACEFDYSGAQACKALKEEGYRVILVNSNPATIMTDPNLAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+ P +V +++EKERPDA+LPTMGGQTALN A+AL   G LEKYGVE+IGAK   
Sbjct: 63   ATYIEPIKPAMVAKIIEKERPDAILPTMGGQTALNTALALFNDGTLEKYGVEMIGAKKHV 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I+KAEDR LF++AM  IG+++  S +  T ++ +  A E+   P IIRP+FTLGG GGGI
Sbjct: 123  IEKAEDRQLFREAMDKIGLESARSAMVRTFEDAVK-ALEVTGLPAIIRPSFTLGGEGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEFE I + GLA S T +VL+E+S+LGWKEYE+EV+RD ADN +IICSIENVDPMG
Sbjct: 182  AYNREEFEQIVRNGLAISPTHEVLIEESILGWKEYEMEVVRDNADNCIIICSIENVDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            +HTGDSITVAPA TLTDKEYQ +RD S+A++REIGV+ GGSNVQFAVNP DG ++VIEMN
Sbjct: 242  IHTGDSITVAPALTLTDKEYQIMRDASLAVLREIGVDTGGSNVQFAVNPDDGRLIVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRF 447
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT  TPASFEP+IDYVVTKIPRF
Sbjct: 302  PRVSRSSALASKATGFPIAKIAAKLAVGYTLDELDNDITGVTPASFEPTIDYVVTKIPRF 361

Query: 448  AFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDWE 507
             FEKFPG++PLL T MKSVGEAM++G  F ES QK LRS+E G +G     + E   D  
Sbjct: 362  TFEKFPGAKPLLGTAMKSVGEAMSIGGCFAESLQKGLRSMETGLTGLNEVKI-EGAPDKA 420

Query: 508  QLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSVS 567
             ++  L  P P R+     A + G+ + EI   +  D W+L Q + L+  E+ +    + 
Sbjct: 421  AIRAKLTQPIPFRILYAAQAFRHGLTLKEIQGATKFDPWYLKQIEMLVAEEEKVRANGIP 480

Query: 568  NMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTPY 627
               K +   +K+ GFSD ++A      E  VR  R +LG+ P YKR+DTCAAEF + T Y
Sbjct: 481  T-DKQELLRLKKLGFSDARLAELAGKDEDAVRADRHALGLRPVYKRIDTCAAEFPSRTSY 539

Query: 628  MYSSYDF------ECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETI 681
            MYS Y+       E E+  T +KKV+ILGGGPNRIGQGIEFDYCC H +++L+ AG E I
Sbjct: 540  MYSMYEGDGFVEPENEAEVTDRKKVIILGGGPNRIGQGIEFDYCCVHAAYALREAGIEAI 599

Query: 682  MMNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPE----GIIVQFGGQTPLKLSLP 737
            M+N NPETVSTDYDTSDRLYFEPLT EDV+ +  LE+      G+IVQ+GGQTPLKLS  
Sbjct: 600  MVNCNPETVSTDYDTSDRLYFEPLTAEDVIELCQLEQSNGELLGVIVQYGGQTPLKLSAA 659

Query: 738  IHQYLDEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEAD 797
            + +               V I GTSPDSID AEDR+RF A+I +L + QP  GIA+S  +
Sbjct: 660  LEK-------------AGVPILGTSPDSIDLAEDRDRFQALINKLGLRQPANGIARSVDE 706

Query: 798  ALAIAKEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAI 857
            A+ IA+ IGYP+V+RPSYVLGGRAMEIV+T E L+ Y+  AV+V  + PVLID +L DAI
Sbjct: 707  AVKIAEGIGYPIVIRPSYVLGGRAMEIVHTTEDLLRYMHEAVQVSGKSPVLIDSFLQDAI 766

Query: 858  EIDVDALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKR 917
            EID DA++D   NV + GIM+HIE+AG+HSGDSAC +P  ++  + +  +   T++LAK 
Sbjct: 767  EIDADAVSDG-ENVFVAGIMQHIEEAGIHSGDSACSLPPYSLDEAMIARLKEQTVQLAKA 825

Query: 918  LNVCGLMNCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLG 977
            L+V GLMN Q+AI     +YL+E NPRASRTVPFV+KA G+P+AK  A +M+G+ L D  
Sbjct: 826  LDVIGLMNVQFAIKDD-IIYLIEVNPRASRTVPFVAKATGNPIAKIGARIMAGEKLGD-- 882

Query: 978  FTKEVIP-KHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQ 1036
            F  +  P KH++VKEAVLPF +F G D LLGPEMRSTGEVMG+D  F  AFAKAQ+AAG 
Sbjct: 883  FEIDHGPFKHIAVKEAVLPFNRFPGVDTLLGPEMRSTGEVMGLDTDFGRAFAKAQMAAGH 942

Query: 1037 KLPLSGTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEG 1096
             LPL G +F+S+ +  KP   ++A+  + +GF IV+T GTA  LE +G+ V  V K+ EG
Sbjct: 943  TLPLEGKIFISVKNYDKPAAVQLARDAIALGFGIVATHGTAEALEKEGLDVTPVNKVQEG 1002

Query: 1097 RPHAGDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRS 1156
            RPH  DM+ NG I+++  T+       +D   +RR  L   +P  TTV+GA A   AI +
Sbjct: 1003 RPHIVDMMKNGDIKLVFNTTESKQA-VVDSFSIRRTALTDDIPYYTTVAGARATLRAIDN 1061

Query: 1157 LKSNTVTMTALQDFF 1171
            LK   + +  +Q++ 
Sbjct: 1062 LKRGALEVRPVQEYL 1076


>gi|410861140|ref|YP_006976374.1| carbamoyl phosphate synthase large subunit [Alteromonas macleodii
            AltDE1]
 gi|410818402|gb|AFV85019.1| carbamoyl phosphate synthase large subunit [Alteromonas macleodii
            AltDE1]
          Length = 1073

 Score = 1228 bits (3177), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 620/1076 (57%), Positives = 780/1076 (72%), Gaps = 18/1076 (1%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILI+GAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIKSILIIGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  E+V +++EKERPDA+LPTMGGQTALN A+ L + G LE++G ELIGA  DA
Sbjct: 63   ATYIEPIHWEVVRKIIEKERPDAILPTMGGQTALNCALELDKHGVLEEFGCELIGATADA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAE+R+ F QAMK IG++ P + I +++DE   + + IG FP IIRP+FT+GGTGGGI
Sbjct: 123  IDKAENRERFDQAMKNIGLECPRAEIAHSMDEAHDVLSRIG-FPCIIRPSFTMGGTGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN +EF  IC  GL  S T+++L+++SLLGWKEYE+EV+RD ADN +I+C+IEN DPMG
Sbjct: 182  AYNIDEFNEICTRGLDLSPTNELLIDESLLGWKEYEMEVVRDKADNCIIVCTIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKE+Q +R+ ++A++REIGVE GGSNVQF V+P  G +++IEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEFQIMRNAAMAVLREIGVETGGSNVQFGVDPKTGRMVIIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKK-TPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT   TPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGYTLDELANDITGGLTPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            F FEKF G+   LTTQMKSVGE MA+GR  QES QKALR LE G SG       E     
Sbjct: 362  FNFEKFAGANDRLTTQMKSVGEVMAIGRNQQESLQKALRGLEVGASGLNPMVDLEDPESR 421

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
             ++ Y LR P  +R+  I  A + GM V+E+  L+ ID+W+L Q ++LI +E  +    +
Sbjct: 422  NKVVYELRQPGAERIWYIGDAFRMGMSVEEVFNLTNIDRWYLVQLEDLILLEAKVAELGL 481

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
              +  D    +KR+GFSD ++A  TK  E ++RE R   G+ P YKRVDTCAAEF  +T 
Sbjct: 482  PGIDADFMRALKRKGFSDARLAELTKVAESDIRETRRGFGISPVYKRVDTCAAEFSTSTA 541

Query: 627  YMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSN 686
            YMYS+YD ECE+APT K+K+++LGGGPNRIGQGIEFDYCC H + S++  GYETIM+N N
Sbjct: 542  YMYSTYDEECEAAPTDKEKIMVLGGGPNRIGQGIEFDYCCVHAALSMREDGYETIMVNCN 601

Query: 687  PETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHR 746
            PETVSTDYDTSDRLYFEP+T+EDVL ++  E+P+G+IVQ+GGQTPLKL+          R
Sbjct: 602  PETVSTDYDTSDRLYFEPVTLEDVLEIVAKEQPKGVIVQYGGQTPLKLA----------R 651

Query: 747  LPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEIG 806
               A+G   V + GTSP++ID AEDRERF  ++ +L+++QP      +   AL +A+EIG
Sbjct: 652  ALEAAG---VPVIGTSPEAIDRAEDRERFQQMVNKLNLKQPANATVTNVEQALTMAEEIG 708

Query: 807  YPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALAD 866
            +P+VVRPSYVLGGRAMEIVY  + L  YL  AV+V  + PVL+D++L DAIE+D+DA+ D
Sbjct: 709  FPLVVRPSYVLGGRAMEIVYDIKDLKRYLNEAVKVSNDAPVLLDRFLDDAIEVDIDAICD 768

Query: 867  SCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNC 926
                VVIGGIMEHIEQAGVHSGDSAC +P  ++     D +      +A  L V GLMN 
Sbjct: 769  G-KEVVIGGIMEHIEQAGVHSGDSACSLPPHSLPKDIQDVMREQVKAMALELGVVGLMNT 827

Query: 927  QYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPKH 986
            Q+AI   G+VYL+E NPRA+RTVPFVSKA G PLAK AA  M+G SL + G T+EVIP  
Sbjct: 828  QFAI-KDGEVYLIEVNPRAARTVPFVSKATGIPLAKVAARAMAGVSLAEQGVTEEVIPPF 886

Query: 987  VSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVFL 1046
             SVKE VLPF KFQG D LLGPEMRSTGEVMG+  +F  A+AKA + AG  LP  G   +
Sbjct: 887  YSVKEVVLPFAKFQGVDPLLGPEMRSTGEVMGVGDTFEEAYAKANLGAGAPLPKEGKALI 946

Query: 1047 SLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVAN 1106
            S+ +  KP +  +AKA +  GF I +T GTA  L   GI    V K+ EGRP+  D + N
Sbjct: 947  SVRETDKPKIIELAKALVAAGFSIEATRGTATTLYDAGIMSTVVNKLSEGRPNIVDAIKN 1006

Query: 1107 GQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTV 1162
            G+   ++ T+ G      D + +RR  L  KV   TT++ A A   A  +   N V
Sbjct: 1007 GEYAYLINTTEGRQA-ITDSVYIRREALVNKVTYTTTMNAAFATIRAKSADDRNKV 1061


>gi|386080710|ref|YP_005994235.1| carbamoyl-phosphate synthase large subunit [Pantoea ananatis PA13]
 gi|354989891|gb|AER34015.1| carbamoyl-phosphate synthase large chain CarB [Pantoea ananatis PA13]
          Length = 1076

 Score = 1228 bits (3177), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 616/1071 (57%), Positives = 784/1071 (73%), Gaps = 19/1071 (1%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILILGAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIQSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  E+V +++EKERPDA+LPTMGGQTALN A+ L   G LE++GV +IGA  DA
Sbjct: 63   ATYIEPIHWEVVRKIIEKERPDAVLPTMGGQTALNCALELERQGVLEEFGVTMIGATADA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  F  AMK+IG+ T  SGI +T+DE +++A ++G FP IIRP+FT+GGTGGGI
Sbjct: 123  IDKAEDRRRFDVAMKSIGLDTARSGIAHTMDEALAVAADVG-FPCIIRPSFTMGGTGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEFE IC+ GL  S T+++L+++SL+GWKEYE+EV+RD  DN +I+CSIEN D MG
Sbjct: 182  AYNREEFEEICERGLDLSPTNELLIDESLIGWKEYEMEVVRDKNDNCIIVCSIENFDAMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            +HTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGVE GGSNVQFAVNP +G ++VIEMN
Sbjct: 242  IHTGDSITVAPAQTLTDKEYQIMRNASLAVLREIGVETGGSNVQFAVNPKNGRLIVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VG++LD++ NDIT  +TPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGFTLDELMNDITGGRTPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            F FEKF G+   LTTQMKSVGE MA+GRTFQES QKALR LE G +G+      +     
Sbjct: 362  FNFEKFAGANDRLTTQMKSVGEVMAIGRTFQESVQKALRGLEVGANGFDPKVHLDDAEAL 421

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
             +++  L+    DR+  I  A + GM VD +  L+ ID+WFL Q +EL+ +E+ +  + V
Sbjct: 422  TRIRRELKDAGSDRIWYIADAFRAGMSVDGVFNLTNIDRWFLVQIEELVRLEEQVAREGV 481

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
            + +  D    +KR+GF+D ++A      E E+R+ R    + P YKRVDTCAAEF  +T 
Sbjct: 482  NGLNADFLRTLKRKGFADARLASLVGVAEGEIRKLRQHHNLHPVYKRVDTCAAEFSTDTA 541

Query: 627  YMYSSYDFECESAPTQ-KKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNS 685
            YMYS+Y+ ECE+ P Q + K+++LGGGPNRIGQGIEFDYCC H + +L+  G+ETIM+N 
Sbjct: 542  YMYSTYEEECEANPNQDRDKIMVLGGGPNRIGQGIEFDYCCVHAALALREDGFETIMVNC 601

Query: 686  NPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEH 745
            NPETVSTDYDTSDRLYFEP+T+EDVL ++ +E+P+G+IVQ+GGQTPLKL+          
Sbjct: 602  NPETVSTDYDTSDRLYFEPVTLEDVLEIVRIEKPKGVIVQYGGQTPLKLA---------- 651

Query: 746  RLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEI 805
            R   A+G   V + GTSPD+ID AEDRERF   +  L+++QP      +   A+  A  I
Sbjct: 652  RALEAAG---VPVIGTSPDAIDRAEDRERFQQAVDRLNLKQPANATVATLEQAVEKAAGI 708

Query: 806  GYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALA 865
            GYP+VVRPSYVLGGRAMEIVY +  L  Y + AV V  + PVL+D++L DA+E+DVDA+ 
Sbjct: 709  GYPLVVRPSYVLGGRAMEIVYDEIDLKRYFQTAVSVSNDAPVLLDRFLDDAVEVDVDAIC 768

Query: 866  DSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMN 925
            D    V+IGGIMEHIEQAGVHSGDSAC +P  T+S    + +     KLA  LNV GLMN
Sbjct: 769  DG-ERVLIGGIMEHIEQAGVHSGDSACSLPAYTLSQDIQNVMRQQVEKLAFELNVRGLMN 827

Query: 926  CQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPK 985
             Q+A+  + +VYL+E NPRA+RTVPFVSKA G PLAK AA VM+GK+L + G T+EVIP 
Sbjct: 828  VQFAVKDN-EVYLIEVNPRAARTVPFVSKATGVPLAKVAARVMAGKTLAEQGVTEEVIPP 886

Query: 986  HVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVF 1045
            + SVKE VLPF KFQG D +LGPEMRSTGEVMG+  +F  AFAKA + A   +  +G   
Sbjct: 887  YYSVKEVVLPFNKFQGVDPILGPEMRSTGEVMGVGRTFAEAFAKAMLGAQSNMKKTGRAL 946

Query: 1046 LSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVA 1105
            LS+ +  K  +  +A      GF++ +T GTA  L   GI    V K+HEGRPH  D + 
Sbjct: 947  LSVREGDKKRIVDLAAKLQKFGFELDATHGTAVVLGEAGINPRLVNKVHEGRPHIQDRLK 1006

Query: 1106 NGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRS 1156
            NG+   +V T++G    + D   +RR  L YKV   TT++G  A A A+ +
Sbjct: 1007 NGEYAYIVNTTAGRQAIE-DSKLIRRSALQYKVHYDTTLNGGFATAMALNA 1056


>gi|440289163|ref|YP_007341928.1| carbamoyl-phosphate synthase, large subunit [Enterobacteriaceae
            bacterium strain FGI 57]
 gi|440048685|gb|AGB79743.1| carbamoyl-phosphate synthase, large subunit [Enterobacteriaceae
            bacterium strain FGI 57]
          Length = 1073

 Score = 1228 bits (3176), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 615/1070 (57%), Positives = 783/1070 (73%), Gaps = 18/1070 (1%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILILGAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  E+V +++EKERPDA+LPTMGGQTALN A+ L   G LE++GV +IGA  DA
Sbjct: 63   ATYIEPIHWEVVRKIIEKERPDAVLPTMGGQTALNCALELERQGVLEEFGVTMIGATADA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  F  AMK IG+ T  SGI +T++E +++A ++G FP IIRP+FT+GGTGGGI
Sbjct: 123  IDKAEDRRRFDVAMKKIGLDTARSGIAHTMEEALAVAADVG-FPCIIRPSFTMGGTGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEFE IC+ GL  S T+++L+++SL+GWKEYE+EV+RD  DN +I+CSIEN D MG
Sbjct: 182  AYNREEFEEICERGLDLSPTNELLIDESLIGWKEYEMEVVRDKNDNCIIVCSIENFDAMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            +HTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGVE GGSNVQFAVNP +G ++VIEMN
Sbjct: 242  IHTGDSITVAPAQTLTDKEYQIMRNASMAVLREIGVETGGSNVQFAVNPKNGRLIVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT  +TPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGYTLDELMNDITGGRTPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            F FEKF G+   LTTQMKSVGE MA+GRT QES QKALR LE G +G+      +     
Sbjct: 362  FNFEKFAGANDRLTTQMKSVGEVMAIGRTQQESLQKALRGLEVGATGFDPKVSLDDPEAL 421

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
             +++  L+    +R+  I  A + G+ VD +  L+ ID+WFL Q +EL+ +E+ +    +
Sbjct: 422  TKIRRELKDAGAERIWYIADAFRAGLSVDGVFNLTNIDRWFLVQIEELVRLEEKVAEVGI 481

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
            + + +D   ++KR+GF+D ++A      E E+R+ R    + P YKRVDTCAAEF  +T 
Sbjct: 482  NGLDEDFLRQLKRKGFADARLAKLAGVREAEIRKLRDQYNLHPVYKRVDTCAAEFATDTA 541

Query: 627  YMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSN 686
            YMYS+Y+ ECES P+ + K+++LGGGPNRIGQGIEFDYCC H S +L+  GYETIM+N N
Sbjct: 542  YMYSTYEDECESNPSTRDKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVNCN 601

Query: 687  PETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHR 746
            PETVSTDYDTSDRLYFEP+T+EDVL ++ +E+P+G+IVQ+GGQTPLKL+          R
Sbjct: 602  PETVSTDYDTSDRLYFEPVTLEDVLEIVRIEKPKGVIVQYGGQTPLKLA----------R 651

Query: 747  LPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEIG 806
               A+G   V + GTSPD+ID AEDRERF   +  L ++QP      +   A+  AKEIG
Sbjct: 652  ALEAAG---VPVIGTSPDAIDRAEDRERFQHAVDRLKLKQPANATVTAIEMAVEKAKEIG 708

Query: 807  YPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALAD 866
            YP+VVRPSYVLGGRAMEIVY +  L  Y + AV V  + PVL+D++L DA+E+DVDA+ D
Sbjct: 709  YPLVVRPSYVLGGRAMEIVYDEADLKRYFQTAVSVSNDAPVLLDRFLDDAVEVDVDAICD 768

Query: 867  SCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNC 926
                V+IGGIMEHIEQAGVHSGDSAC +P  T+S    D +     KLA  L V GLMN 
Sbjct: 769  G-EMVLIGGIMEHIEQAGVHSGDSACSLPAYTLSQEIQDVMRQQVQKLAFELQVRGLMNV 827

Query: 927  QYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPKH 986
            Q+A+  + +VYL+E NPRA+RTVPFVSKA G PLAK AA VM+GK+L + G TKE+IP +
Sbjct: 828  QFAVKDN-EVYLIEVNPRAARTVPFVSKATGVPLAKVAARVMAGKTLAEQGVTKEIIPPY 886

Query: 987  VSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVFL 1046
             SVKE VLPF KF G D LLGPEMRSTGEVMG+  +F  AFAKAQ+ +   +   G   L
Sbjct: 887  YSVKEVVLPFNKFPGVDPLLGPEMRSTGEVMGVGRTFAEAFAKAQLGSNSTMKKQGRALL 946

Query: 1047 SLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVAN 1106
            S+ +  K  +  +A   L  GF++ +T GTA  L   GI    V K+HEGRPH  D + N
Sbjct: 947  SVREGDKERVVDLAAKLLKHGFELDATHGTAIVLGEAGINPRLVNKVHEGRPHIQDRIKN 1006

Query: 1107 GQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRS 1156
            G+   ++ T++G    + D   +RR  L YKV   TT++G  A + A+ +
Sbjct: 1007 GEYTYIINTTAGRQAIE-DSKLIRRSALQYKVHYDTTLNGGFATSMALNA 1055


>gi|237807800|ref|YP_002892240.1| carbamoyl-phosphate synthase large subunit [Tolumonas auensis DSM
            9187]
 gi|237500061|gb|ACQ92654.1| carbamoyl-phosphate synthase, large subunit [Tolumonas auensis DSM
            9187]
          Length = 1075

 Score = 1228 bits (3176), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 615/1064 (57%), Positives = 774/1064 (72%), Gaps = 18/1064 (1%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTDL+ ILILGAGPIVIGQACEFDYSG QACKAL+EEG+ VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDLKSILILGAGPIVIGQACEFDYSGAQACKALREEGFRVILVNSNPATIMTDPEMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+T E+V +++EKERPDA+LPTMGGQTALN A+ L   G L ++GVE+IGA  DA
Sbjct: 63   ATYIEPITWEVVRKIIEKERPDAVLPTMGGQTALNCALDLERHGVLAEFGVEMIGATADA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  F  AM++IG++ P +GI + +DE   +   +G FP IIRP+FT+GG+GGGI
Sbjct: 123  IDKAEDRRRFDLAMRSIGLECPRAGIAHNMDEAWDVQKTVG-FPCIIRPSFTMGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN EEF  IC+ GL  S T ++L+++SL+GWKEYE+EV+RD  DN +I+CSIEN DPMG
Sbjct: 182  AYNPEEFVEICERGLDLSPTKELLIDESLIGWKEYEMEVVRDRNDNCIIVCSIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGVE GGSNVQF +NP DG +++IEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQLMRNASMAVLREIGVETGGSNVQFGINPDDGRMVIIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL++GY+LD++ NDIT  KTPASFEPSIDYVVTK+PR
Sbjct: 302  PRVSRSSALASKATGFPIAKIAAKLAIGYTLDELMNDITGGKTPASFEPSIDYVVTKVPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            F FEKF G+   LTTQMKSVGE MA+GRTFQES QKA+R LE G +G+      + D   
Sbjct: 362  FNFEKFAGANDRLTTQMKSVGEVMAIGRTFQESLQKAMRGLEIGRTGFDPVIDADADDVK 421

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
              +++ L+ P  DR+  +  A + GM ++EI   + ID WFL Q +EL+++E  +    +
Sbjct: 422  ATIRHELQNPGADRLWYVADAFRAGMSLEEIFNDTKIDPWFLIQIEELLNLEAQVAATGL 481

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
            + +  D   ++KR+GF+D ++A      E +VRE R    V+P YKRVDTCAAEF  NT 
Sbjct: 482  TGIDADFMRKLKRKGFADARLAKLLNVKEAQVRELRYQHKVLPVYKRVDTCAAEFSTNTA 541

Query: 627  YMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSN 686
            YMYS+Y+ ECE+APT K K+++LGGGPNRIGQGIEFDYCC H + +L+  GYETIM+N N
Sbjct: 542  YMYSTYEEECEAAPTNKDKIIVLGGGPNRIGQGIEFDYCCVHAALALREDGYETIMVNCN 601

Query: 687  PETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHR 746
            PETVSTDYDTSDRLYFEP+T+EDVL ++ +E+P+G+IVQ+GGQTPLKLS          R
Sbjct: 602  PETVSTDYDTSDRLYFEPVTLEDVLEIVRIEKPKGVIVQYGGQTPLKLS----------R 651

Query: 747  LPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEIG 806
               A+G   V I GTSPD+ID AEDRERF   ++ L ++QP+     +   A+  AKEIG
Sbjct: 652  ALEAAG---VPIIGTSPDAIDRAEDRERFQQAVERLGLKQPQNTTVTAMEQAVEKAKEIG 708

Query: 807  YPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALAD 866
            YP+VVRPSYVLGGRAMEIV  +  L  Y   AV V  E PVL+D +L +AIE+DVDA+ D
Sbjct: 709  YPLVVRPSYVLGGRAMEIVSDEIDLRRYFNEAVSVSNESPVLLDHFLDNAIELDVDAICD 768

Query: 867  SCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNC 926
                VVIGG+MEHIEQ G+HSGDS C +P  ++ +  L  I     KLA  L V GLMN 
Sbjct: 769  G-EVVVIGGVMEHIEQCGIHSGDSGCSLPPYSLKADVLAEIREQVRKLAMELKVVGLMNV 827

Query: 927  QYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPKH 986
            Q+A+     +YL+E NPRA+RTVPFVSKA G PLAK AA VM+G+SL   GFTKE+IP +
Sbjct: 828  QFAVKDDV-IYLIEVNPRAARTVPFVSKATGAPLAKIAARVMAGQSLAQQGFTKEIIPPY 886

Query: 987  VSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVFL 1046
             SVKE VLPF KF G D LLGPEMRSTGEVMG+  +F  A+AKAQ+  G+ LP SG   L
Sbjct: 887  FSVKEVVLPFNKFPGVDPLLGPEMRSTGEVMGVGDTFAEAYAKAQLGTGKGLPKSGRALL 946

Query: 1047 SLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVAN 1106
            S+    K     +A A +  GF++ +TSGT+  L   GI   +V K+ EGRPH  D + N
Sbjct: 947  SVRGGDKQRAVELAAALIKAGFELDATSGTSDALTAAGIVNRKVNKVSEGRPHILDRIKN 1006

Query: 1107 GQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALAN 1150
            G+   +V T  G  +   D  +LRR  L +KV   TT++   A+
Sbjct: 1007 GEYTFIVNTVEG-RVAIADSKQLRRGALQHKVSYTTTLNAGFAS 1049


>gi|54295464|ref|YP_127879.1| carbamoyl-phosphate synthase large subunit [Legionella pneumophila
            str. Lens]
 gi|53755296|emb|CAH16790.1| carbamoyl-phosphate synthase large subunit [Legionella pneumophila
            str. Lens]
          Length = 1067

 Score = 1228 bits (3176), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 618/1086 (56%), Positives = 789/1086 (72%), Gaps = 25/1086 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILILGAGPIVIGQACEFDYSGTQA +ALKEEGY VIL+NSNPATIMTDP LAD
Sbjct: 3    KRTDIKSILILGAGPIVIGQACEFDYSGTQAVRALKEEGYRVILVNSNPATIMTDPELAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  + V +++E ERPDALLPTMGGQTALN A+ L   G L KY VE+IGA  +A
Sbjct: 63   ATYIEPVQWKEVARIIEIERPDALLPTMGGQTALNCALDLVREGVLAKYSVEMIGATREA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I +AEDR+ F+Q M  IG+  P S I ++L+E I +   +G FP IIRP+FT+GG+GGGI
Sbjct: 123  IDRAEDREKFRQLMIKIGLDMPRSAIAHSLEEAIQVQARLG-FPAIIRPSFTMGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEFE IC  GL  S T ++L+++S+LGWKEYE+EV+RD  DN +I+C+IEN DPMG
Sbjct: 182  AYNREEFEEICIRGLELSPTHELLIDESVLGWKEYEMEVVRDKNDNCIIVCTIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQR+RD +I ++R +GV+ GGSNVQFA+NP DG ++V+EMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQRMRDAAIKVLRAVGVDTGGSNVQFAINPEDGRMLVVEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ N+IT  KTPASFEPSIDYVVTK+PR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGYTLDELKNEITGGKTPASFEPSIDYVVTKVPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            F F+KFP +   LTTQMKSVGE MA+G  FQES QKA+R LE G  G      KE   D 
Sbjct: 362  FNFDKFPQTPDTLTTQMKSVGEVMAIGSNFQESLQKAIRGLEIGRCGLHSLFHKE---DM 418

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
             +L+  LR P PDR+  I  A ++ + ++EIH  S +D WFL Q +EL+ +E+ ++ +++
Sbjct: 419  ARLRGHLREPTPDRLWYIADAFRQNLSLEEIHLESRVDPWFLAQIQELVLLERSIIGKTI 478

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
              + K   + +K RGF+D  +A     TE EVR +R+ L ++P YKR+D+CA EF ++T 
Sbjct: 479  RELDKTTLHLMKHRGFADAYLAKLLGCTEAEVRARRVELEILPVYKRIDSCAGEFPSDTA 538

Query: 627  YMYSSYDFECESAP-TQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNS 685
            YMYS Y+  CE+ P + KKK++ILGGGPNRIGQGIEFDYCC H + SL+SAGY+TIM+N 
Sbjct: 539  YMYSCYEGSCEARPESNKKKIMILGGGPNRIGQGIEFDYCCVHAALSLRSAGYQTIMVNC 598

Query: 686  NPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEH 745
            NPETVSTD+DTSDRLYFEP+T+EDVL+++ +E+PEG+IV +GGQTPLKL+          
Sbjct: 599  NPETVSTDFDTSDRLYFEPVTLEDVLSIVAIEQPEGVIVHYGGQTPLKLA---------- 648

Query: 746  RLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEI 805
            R   A+G   V+I GTS D+ID AEDRERF  ++KEL + QP  G  +SEA+A+ +A +I
Sbjct: 649  RDLEANG---VKIIGTSSDAIDMAEDRERFQQMVKELKLHQPDNGTVRSEAEAIELANKI 705

Query: 806  GYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALA 865
            GYP+VVRPSYVLGGRAMEIVY +E L  YL +AVEV  + PVL+DK+L+DAIE+D+DA+ 
Sbjct: 706  GYPLVVRPSYVLGGRAMEIVYQEEDLRYYLSHAVEVSNDSPVLLDKFLNDAIEVDIDAVC 765

Query: 866  DSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMN 925
            D   +V+IG IMEHIEQAG+HSGDSAC +P  ++       +     K+A +L V GL+N
Sbjct: 766  DG-KDVLIGAIMEHIEQAGIHSGDSACTLPPFSLGVVVQQDLIEQIRKMALKLGVVGLIN 824

Query: 926  CQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTK-EVIP 984
             Q+AI  + D+Y+LE NPRASRTVPFVSKA G PLAK AAL   G SL D G  +    P
Sbjct: 825  AQFAI-QADDIYVLEVNPRASRTVPFVSKATGLPLAKIAALCKVGISLKDQGLNQNHHTP 883

Query: 985  KHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTV 1044
               S+K  V PF KF G D +LGPEM+STGEVMGI   F  A+AKAQ+ AG  +      
Sbjct: 884  SFYSIKLPVFPFIKFSGVDSILGPEMKSTGEVMGIAKRFGQAYAKAQLGAGCHIAKRRRA 943

Query: 1045 FLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMV 1104
            F+S+ D  K  +  IAK  +++GF+I++T GTA  L+  G+   RV K+ EGRPH  D +
Sbjct: 944  FVSVRDADKTRVGEIAKRLIELGFEIIATRGTALALQAAGVDCRRVFKVAEGRPHVLDFI 1003

Query: 1105 ANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTVTM 1164
             N +I  +V T+ G      D   +RR  L +KV   TT+SGA A   A++     TVT 
Sbjct: 1004 KNNEIDFIVNTTEGKQAIA-DSFAIRRNALQHKVSYTTTLSGAEAACLAMKYEDRETVTR 1062

Query: 1165 TALQDF 1170
              LQD 
Sbjct: 1063 --LQDL 1066


>gi|156935438|ref|YP_001439354.1| carbamoyl phosphate synthase large subunit [Cronobacter sakazakii
            ATCC BAA-894]
 gi|417790460|ref|ZP_12438011.1| carbamoyl phosphate synthase large subunit [Cronobacter sakazakii
            E899]
 gi|449309559|ref|YP_007441915.1| carbamoyl phosphate synthase large subunit [Cronobacter sakazakii
            SP291]
 gi|156533692|gb|ABU78518.1| hypothetical protein ESA_03297 [Cronobacter sakazakii ATCC BAA-894]
 gi|333955410|gb|EGL73161.1| carbamoyl phosphate synthase large subunit [Cronobacter sakazakii
            E899]
 gi|449099592|gb|AGE87626.1| carbamoyl phosphate synthase large subunit [Cronobacter sakazakii
            SP291]
          Length = 1074

 Score = 1228 bits (3176), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 614/1071 (57%), Positives = 783/1071 (73%), Gaps = 19/1071 (1%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILILGAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  E+V +++EKERPDA+LPTMGGQTALN A+ L   G LE++GV +IGA  DA
Sbjct: 63   ATYIEPIHWEVVRKIIEKERPDAVLPTMGGQTALNCALELERQGVLEEFGVTMIGATADA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  F  AMK IG+ T  SGI + ++E +++A ++G +P IIRP+FT+GGTGGGI
Sbjct: 123  IDKAEDRRRFDVAMKKIGLDTARSGIAHNMEEALAVAADVG-YPCIIRPSFTMGGTGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEFE IC  GL  S T ++L+++SL+GWKEYE+EV+RD  DN +I+CSIEN D MG
Sbjct: 182  AYNREEFEEICARGLDLSPTKELLIDESLIGWKEYEMEVVRDKNDNCIIVCSIENFDAMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            +HTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGVE GGSNVQFAVNP +G ++VIEMN
Sbjct: 242  IHTGDSITVAPAQTLTDKEYQIMRNASMAVLREIGVETGGSNVQFAVNPKNGRLIVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT  +TPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGYTLDELMNDITGGRTPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            F FEKF G+   LTTQMKSVGE MA+GRT QES QKALR LE G +G+      +     
Sbjct: 362  FNFEKFAGANDRLTTQMKSVGEVMAIGRTQQESMQKALRGLEVGATGFDPKVSLDDPEAL 421

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
             +++  L+    +R+  I  A + G+ VD +  L+ ID+WFL Q +EL+ +E+ +  Q +
Sbjct: 422  TKIRRELKDAGAERIWYIADAFRAGLSVDGVFNLTNIDRWFLVQIEELVRLEEQVAEQGI 481

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
            + ++ D    +KR+GF+D ++A     +E E+R+ R    + P YKRVDTCAAEF  +T 
Sbjct: 482  NGLSADFLRMLKRKGFADARLAKLAGVSESEIRKLREQYNLHPVYKRVDTCAAEFSTDTA 541

Query: 627  YMYSSYDFECESAPTQ-KKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNS 685
            YMYS+Y+ ECE+ P Q ++K+++LGGGPNRIGQGIEFDYCC H + +L+  GYETIM+N 
Sbjct: 542  YMYSTYEEECEANPNQDREKIMVLGGGPNRIGQGIEFDYCCVHAALALREDGYETIMVNC 601

Query: 686  NPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEH 745
            NPETVSTDYDTSDRLYFEP+T+EDVL ++ +E+P+G+IVQ+GGQTPLKL+          
Sbjct: 602  NPETVSTDYDTSDRLYFEPVTLEDVLEIVRIEKPKGVIVQYGGQTPLKLA---------- 651

Query: 746  RLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEI 805
            R   A+G   V + GTSPD+ID AEDRERF   +  L ++QP      +   A+  AKEI
Sbjct: 652  RALEAAG---VPVIGTSPDAIDRAEDRERFQQAVDRLKLKQPANATVTAIEQAVEKAKEI 708

Query: 806  GYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALA 865
            GYP+VVRPSYVLGGRAMEIVY +  L  Y + AV V  + PVL+D++L DA+E+DVDA+ 
Sbjct: 709  GYPLVVRPSYVLGGRAMEIVYDEADLRRYFQTAVSVSNDAPVLLDRFLDDAVEVDVDAIC 768

Query: 866  DSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMN 925
            D    V+IGGIMEHIEQAGVHSGDSAC +P  T+S    D +     KLA  L V GLMN
Sbjct: 769  DG-EMVLIGGIMEHIEQAGVHSGDSACSLPAYTLSQEIQDVMRQQVQKLAFELQVRGLMN 827

Query: 926  CQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPK 985
             Q+A+  + +VYL+E NPRA+RTVPFVSKA G PLAK AA VM+GK+L++ G TKE+IP 
Sbjct: 828  VQFAVKDN-EVYLIEVNPRAARTVPFVSKATGVPLAKVAARVMAGKTLSEQGVTKEIIPP 886

Query: 986  HVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVF 1045
            + SVKE VLPF KF G D LLGPEMRSTGEVMG+  +F  AFAKAQ+ +   +   G   
Sbjct: 887  YYSVKEVVLPFNKFPGVDPLLGPEMRSTGEVMGVGRTFAEAFAKAQLGSNSTMKKQGRAL 946

Query: 1046 LSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVA 1105
            LS+ +  K  +  +A   L  GF++ +T GTA  L   GI    V K+HEGRPH  D + 
Sbjct: 947  LSVREGDKERVVDLAAKLLKFGFELDATHGTAIVLGEAGINPRLVNKVHEGRPHIQDRIK 1006

Query: 1106 NGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRS 1156
            NG+   ++ T++G    + D   +RR  L YKV   TT++G  A A A+ +
Sbjct: 1007 NGEYTYIINTTAGRQAIE-DSKLIRRSALQYKVHYDTTLNGGFATAMALNA 1056


>gi|220934153|ref|YP_002513052.1| carbamoyl-phosphate synthase, large subunit [Thioalkalivibrio
            sulfidophilus HL-EbGr7]
 gi|219995463|gb|ACL72065.1| carbamoyl-phosphate synthase, large subunit [Thioalkalivibrio
            sulfidophilus HL-EbGr7]
          Length = 1072

 Score = 1228 bits (3176), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 638/1086 (58%), Positives = 804/1086 (74%), Gaps = 24/1086 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD+  ILI+GAGPI+IGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDINSILIIGAGPIIIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
              YI P+  + V +++E+E+PDA+LPTMGGQTALN A+ LA+ G L+K+ VELIGA  DA
Sbjct: 63   AVYIEPVEWKTVARIIEREKPDAILPTMGGQTALNCALDLAKHGVLKKHNVELIGASEDA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I  AEDR+ F+ AM  IG+++P + + NT DE   +  +IG FP+IIRP+FT+GG+GGGI
Sbjct: 123  IDMAEDRERFRDAMTEIGLESPMAFVVNTWDEAQEVQPKIG-FPVIIRPSFTMGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN++E+E I K GL  S T++V VE+S+LGWKEYE+EV+RD ADN +IICSIEN+DPMG
Sbjct: 182  AYNRDEYEEIVKRGLDLSPTNEVQVEESVLGWKEYEMEVVRDKADNCIIICSIENLDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            +HTGDSITVAPAQTLTDKEYQ +R+ SIA++R+IGV+ GGSNVQFAVNP DG +++IEMN
Sbjct: 242  IHTGDSITVAPAQTLTDKEYQIMRNASIAVLRKIGVDTGGSNVQFAVNPDDGRLVIIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKK-TPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ N+IT   TPASFEPSIDYVVTK+PR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGYTLDELRNEITGGVTPASFEPSIDYVVTKVPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            F FEKFP +E  LTTQMKSVGE MA+GR FQESFQKALR LE G  G     V   D D 
Sbjct: 362  FTFEKFPQAEAKLTTQMKSVGEVMAIGRCFQESFQKALRGLETGADGLN-PMVDLNDPDA 420

Query: 507  EQLKYSLRVPN-PDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQS 565
            E L     V N PDR+  +  A + GM ++++HEL+ ID+WFL Q  ELI  EQ L  +S
Sbjct: 421  EMLVRQQLVANGPDRIWYVGDAFRLGMSIEQVHELTRIDRWFLAQINELIFTEQQLQGRS 480

Query: 566  VSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANT 625
            + ++ +    ++KRRGFSD+++A      E+ VRE R  L V P YKRVDTCAAEF +NT
Sbjct: 481  LKDLDRLALLDLKRRGFSDRRLATLLGEKEQAVREHRHGLKVRPVYKRVDTCAAEFASNT 540

Query: 626  PYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNS 685
             YMYSSYD ECE+AP+ ++K+++LGGGPNRIGQGIEFDYCC H + +++  GYETIM+N 
Sbjct: 541  AYMYSSYDEECEAAPSSREKIMVLGGGPNRIGQGIEFDYCCVHAALAMREDGYETIMVNC 600

Query: 686  NPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEH 745
            NPETVSTDYDTSDRLYFEPLT+EDVL ++ +E+P G+IVQ+GGQTPLKL+          
Sbjct: 601  NPETVSTDYDTSDRLYFEPLTLEDVLEIVAVEKPRGVIVQYGGQTPLKLA---------- 650

Query: 746  RLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEI 805
            R   A+G   V I GT+PDSID AEDRERF  +I  L + QP    A+S  DA++ A+EI
Sbjct: 651  RDLEAAG---VPIIGTTPDSIDLAEDRERFQQLIDRLELVQPPNRTARSVEDAISKAEEI 707

Query: 806  GYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALA 865
            GYPVVVRPSYVLGGRAMEIVY +E L  Y+ +AV+V  + PVL+D++L DA+E+DVDA+ 
Sbjct: 708  GYPVVVRPSYVLGGRAMEIVYNEEDLRRYMRSAVQVSNDAPVLLDRFLDDAVEVDVDAIC 767

Query: 866  DSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMN 925
            D    V+IGG+M+HIEQAGVHSGDSAC +P  ++     D +     K+A  L V GLMN
Sbjct: 768  DG-EEVLIGGVMQHIEQAGVHSGDSACSLPPYSLDKKIQDELREQVRKMAFGLKVVGLMN 826

Query: 926  CQYAITTSGD-VYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIP 984
             Q+A+   GD VY+LE NPRASRTVPFVSKAIG PLAK AA  M+G+SL + G   EVIP
Sbjct: 827  TQFAV--QGDKVYVLEVNPRASRTVPFVSKAIGKPLAKIAARCMAGRSLREQGVDGEVIP 884

Query: 985  KHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTV 1044
             + SVKEAV PF KF G D +LGPEM+STGEVMG+  SF  AFAK+Q+ AG  LP  G  
Sbjct: 885  SYFSVKEAVFPFIKFPGVDTILGPEMKSTGEVMGMGRSFGEAFAKSQLGAGVTLPQRGKA 944

Query: 1045 FLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMV 1104
            F+S+ +  K  + ++ +A ++ GF++++T GTA  L+  GI    V K+ EGRPH  DM+
Sbjct: 945  FVSVREADKGGVAKVGRALVEQGFEVIATRGTAEVLKAAGIECTPVNKVTEGRPHIVDMI 1004

Query: 1105 ANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTVTM 1164
             N +I ++V T+ G      D   +RR  L +KV   TT++GALA   A+  L    V  
Sbjct: 1005 KNDEISLIVNTTEGRQA-IADSFTIRREALQHKVSYTTTLAGALATVSALSYLAHEEVYR 1063

Query: 1165 TALQDF 1170
              LQD 
Sbjct: 1064 --LQDM 1067


>gi|432717045|ref|ZP_19952050.1| carbamoyl-phosphate synthase large chain [Escherichia coli KTE9]
 gi|431267908|gb|ELF59423.1| carbamoyl-phosphate synthase large chain [Escherichia coli KTE9]
          Length = 1072

 Score = 1228 bits (3176), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 616/1070 (57%), Positives = 781/1070 (72%), Gaps = 18/1070 (1%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILILGAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  E+V +++EKERPDA+LPTMGGQTALN A+ L   G LE++GV +IGA  DA
Sbjct: 63   ATYIEPIHWEVVRKIIEKERPDAVLPTMGGQTALNCALELERQGVLEEFGVTMIGATADA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  F  AMK IG++T  SGI +T++E +++A ++G FP IIRP+FT+GG+GGGI
Sbjct: 123  IDKAEDRRRFDVAMKKIGLETARSGIAHTMEEALAVAADVG-FPCIIRPSFTMGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEFE IC  GL  S T ++L+++SL+GWKEYE+EV+RD  DN +I+CSIEN D MG
Sbjct: 182  AYNREEFEEICARGLDLSPTKELLIDESLIGWKEYEMEVVRDKNDNCIIVCSIENFDAMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            +HTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGVE GGSNVQFAVNP +G ++VIEMN
Sbjct: 242  IHTGDSITVAPAQTLTDKEYQIMRNASMAVLREIGVETGGSNVQFAVNPKNGRLIVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT  +TPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGYTLDELMNDITGGRTPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            F FEKF G+   LTTQMKSVGE MA+GRT QES QKALR LE G +G+      +     
Sbjct: 362  FNFEKFAGANDRLTTQMKSVGEVMAIGRTQQESLQKALRGLEVGATGFDPKVSLDDPEAL 421

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
             +++  L+    +R+  I  A + G+ VD +  L+ ID+WFL Q +EL+ +E+ +    +
Sbjct: 422  TKIRRELKDAGAERIWYIADAFRAGLSVDGVFNLTNIDRWFLVQIEELVRLEEKVAEVGI 481

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
            + +  D   ++KR+GF+D ++A      E E+R+ R    + P YKRVDTCAAEF  +T 
Sbjct: 482  TGLNADFLRQLKRKGFADARLAKLAGVREAEIRKLRDQYDLHPVYKRVDTCAAEFATDTA 541

Query: 627  YMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSN 686
            YMYS+Y+ ECES P+ ++K+++LGGGPNRIGQGIEFDYCC H S +L+  G+ETIM+N N
Sbjct: 542  YMYSTYEEECESNPSDREKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGFETIMVNCN 601

Query: 687  PETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHR 746
            PETVSTDYDTSDRLYFEP+T+EDVL ++ +E+P+G+IVQ+GGQTPLKL+          R
Sbjct: 602  PETVSTDYDTSDRLYFEPVTLEDVLEIVRIEKPKGVIVQYGGQTPLKLA----------R 651

Query: 747  LPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEIG 806
               A+G   V + GTSPD+ID AEDRERF   +  L ++QP      +   A+  AKEIG
Sbjct: 652  ALEAAG---VPVIGTSPDAIDRAEDRERFQHAVDRLKLKQPANATVTAIEMAVEKAKEIG 708

Query: 807  YPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALAD 866
            YP+VVRPSYVLGGRAMEIVY +  L  Y + AV V  + PVL+D +L DA+E+DVDA+ D
Sbjct: 709  YPLVVRPSYVLGGRAMEIVYDEADLRRYFQTAVSVSNDAPVLLDHFLDDAVEVDVDAICD 768

Query: 867  SCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNC 926
                V+IGGIMEHIEQAGVHSGDSAC +P  T+S    D +     KLA  L V GLMN 
Sbjct: 769  G-EMVLIGGIMEHIEQAGVHSGDSACSLPAYTLSQEIQDVMRQQVQKLAFELQVRGLMNV 827

Query: 927  QYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPKH 986
            Q+A+  + +VYL+E NPRA+RTVPFVSKA G PLAK AA VM+GK+L + G TKEVIP +
Sbjct: 828  QFAVKNN-EVYLIEVNPRAARTVPFVSKATGVPLAKVAARVMAGKTLAEQGVTKEVIPPY 886

Query: 987  VSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVFL 1046
             SVKE VLPF KF G D LLGPEMRSTGEVMG+  +F  AFAKAQ+ +   +   G   L
Sbjct: 887  YSVKEVVLPFNKFPGVDPLLGPEMRSTGEVMGVGRTFAEAFAKAQLGSNSTMKKHGRALL 946

Query: 1047 SLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVAN 1106
            S+ +  K  +  +A   L  GF++ +T GTA  L   GI    V K+HEGRPH  D + N
Sbjct: 947  SVREGDKERVVDLAAKLLKQGFELDATHGTAIVLGEAGINPRLVNKVHEGRPHIQDRIKN 1006

Query: 1107 GQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRS 1156
            G+   ++ T+SG    + D   +RR  L YKV   TT++G  A A A+ +
Sbjct: 1007 GEYTYIINTTSGRRAIE-DSRVIRRSALQYKVHYDTTLNGGFATAMALNA 1055


>gi|194446768|ref|YP_002039297.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Newport str. SL254]
 gi|418805758|ref|ZP_13361336.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Newport str. CVM 21550]
 gi|418810119|ref|ZP_13365660.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Newport str. CVM 22513]
 gi|418816453|ref|ZP_13371945.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Newport str. CVM 21538]
 gi|418820825|ref|ZP_13376256.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Newport str. CVM 22425]
 gi|418827595|ref|ZP_13382726.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Newport str. CVM 22462]
 gi|418830666|ref|ZP_13385627.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Newport str. CVM N18486]
 gi|418834255|ref|ZP_13389166.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Newport str. CVM N1543]
 gi|418842752|ref|ZP_13397561.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Newport str. CVM 21554]
 gi|418849841|ref|ZP_13404563.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Newport str. CVM 37978]
 gi|194405431|gb|ACF65653.1| carbamoyl-phosphate synthase, large subunit [Salmonella enterica
            subsp. enterica serovar Newport str. SL254]
 gi|392782230|gb|EJA38867.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Newport str. CVM 22513]
 gi|392783985|gb|EJA40594.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Newport str. CVM 21550]
 gi|392789814|gb|EJA46316.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Newport str. CVM 21538]
 gi|392791563|gb|EJA48032.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Newport str. CVM 22425]
 gi|392798072|gb|EJA54360.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Newport str. CVM 22462]
 gi|392801356|gb|EJA57584.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Newport str. CVM N18486]
 gi|392806163|gb|EJA62278.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Newport str. CVM N1543]
 gi|392806465|gb|EJA62563.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Newport str. CVM 21554]
 gi|392819915|gb|EJA75772.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Newport str. CVM 37978]
          Length = 1075

 Score = 1228 bits (3176), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 617/1078 (57%), Positives = 784/1078 (72%), Gaps = 19/1078 (1%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILILGAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILLNSNPATIMTDPEMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  E+V +++EKERPDA+LPTMGGQTALN A+ L   G LE++GV +IGA  DA
Sbjct: 63   ATYIEPIHWEVVRKIIEKERPDAVLPTMGGQTALNCALELERQGVLEEFGVTMIGATADA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  F  AMK IG+ T  SGI +T++E +++A ++G FP IIRP+FT+GGTGGGI
Sbjct: 123  IDKAEDRRRFDIAMKKIGLDTARSGIAHTMEEALAVAADVG-FPCIIRPSFTMGGTGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEFE IC+ GL  S T+++L+++SL+GWKEYE+EV+RD  DN +I+CSIEN D MG
Sbjct: 182  AYNREEFEEICERGLDLSPTNELLIDESLIGWKEYEMEVVRDKNDNCIIVCSIENFDAMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            +HTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGVE GGSNVQFAVNP +G ++VIEMN
Sbjct: 242  IHTGDSITVAPAQTLTDKEYQIMRNASMAVLREIGVETGGSNVQFAVNPKNGRLIVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT  +TPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGYTLDELMNDITGGRTPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            F FEKF G+   LTTQMKSVGE MA+GRT QES QKALR LE G +G+      +     
Sbjct: 362  FNFEKFAGANDRLTTQMKSVGEVMAIGRTQQESLQKALRGLEVGATGFDPKVSLDDPEAL 421

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
             +++  L+    DR+  I  A + G+ VD +  L+ ID+WFL Q +EL+ +E+ +    +
Sbjct: 422  TKIRRELKDAGADRIWYIADAFRAGLSVDGVFNLTNIDRWFLVQIEELVRLEEKVAEVGI 481

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
            + +  D   ++KR+GF+D ++A      E E+R+ R    + P YKRVDTCAAEF  +T 
Sbjct: 482  TGLNADFLLQLKRKGFADARLAKLAGVREAEIRKLRDQYDLHPVYKRVDTCAAEFATDTA 541

Query: 627  YMYSSYDFECESAPT-QKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNS 685
            YMYS+Y+ ECE+ P+  + K+++LGGGPNRIGQGIEFDYCC H S +L+  GYETIM+N 
Sbjct: 542  YMYSTYEDECEANPSVDRDKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVNC 601

Query: 686  NPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEH 745
            NPETVSTDYDTSDRLYFEP+T+EDVL ++ +E+P+G+IVQ+GGQTPLKL+          
Sbjct: 602  NPETVSTDYDTSDRLYFEPVTLEDVLEIVRIEKPKGVIVQYGGQTPLKLA---------- 651

Query: 746  RLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEI 805
            R   A+G   V + GTSPD+ID AEDRERF   +  L ++QP      +   A+  AKEI
Sbjct: 652  RALEAAG---VPVIGTSPDAIDRAEDRERFQHAVDRLKLKQPANATVTAIEQAVEKAKEI 708

Query: 806  GYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALA 865
            GYP+VVRPSYVLGGRAMEIVY +  L  Y + AV V  + PVL+D++L DA+E+DVDA+ 
Sbjct: 709  GYPLVVRPSYVLGGRAMEIVYDEADLRRYFQTAVSVSNDAPVLLDRFLDDAVEVDVDAIC 768

Query: 866  DSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMN 925
            D    V+IGGIMEHIEQAGVHSGDSAC +P  T+S    D +     KLA  L V GLMN
Sbjct: 769  DG-EMVLIGGIMEHIEQAGVHSGDSACSLPAYTLSQEIQDVMRQQVQKLAFELQVRGLMN 827

Query: 926  CQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPK 985
             Q+A+  + +VYL+E NPRA+RTVPFVSKA G PLAK AA VM+GKSL + G T+E+IP 
Sbjct: 828  VQFAVKDN-EVYLIEVNPRAARTVPFVSKATGVPLAKVAARVMAGKSLTEQGVTQEIIPP 886

Query: 986  HVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVF 1045
            + SVKE VLPF KF G D LLGPEMRSTGEVMG+  +F  AFAKAQ+ +   +   G   
Sbjct: 887  YYSVKEVVLPFNKFPGVDPLLGPEMRSTGEVMGVGRTFAEAFAKAQLGSNSTMKKQGRAL 946

Query: 1046 LSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVA 1105
            LS+ +  K  +  +A   L  GF++ +T GTA  L   GI    V K+HEGRPH  D + 
Sbjct: 947  LSVREGDKERVVDLAAKLLKQGFELDATHGTAIVLGEAGINPRLVNKVHEGRPHIQDRIK 1006

Query: 1106 NGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTVT 1163
            NG+   ++ T++G    + D   +RR  L YKV   TT++G  A   A+ +  +  VT
Sbjct: 1007 NGEYTYIINTTAGRRAIE-DSRVIRRSALQYKVHYDTTLNGGFATTMALNADATEKVT 1063


>gi|429120678|ref|ZP_19181346.1| Carbamoyl-phosphate synthase large chain [Cronobacter sakazakii 680]
 gi|426324821|emb|CCK12083.1| Carbamoyl-phosphate synthase large chain [Cronobacter sakazakii 680]
          Length = 1074

 Score = 1227 bits (3175), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 614/1071 (57%), Positives = 783/1071 (73%), Gaps = 19/1071 (1%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILILGAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  E+V +++EKERPDA+LPTMGGQTALN A+ L   G LE++GV +IGA  DA
Sbjct: 63   ATYIEPIHWEVVRKIIEKERPDAVLPTMGGQTALNCALELERQGVLEEFGVTMIGATADA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  F  AMK IG+ T  SGI + ++E +++A ++G +P IIRP+FT+GGTGGGI
Sbjct: 123  IDKAEDRRRFDVAMKKIGLDTARSGIAHNMEEALAVAADVG-YPCIIRPSFTMGGTGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEFE IC  GL  S T ++L+++SL+GWKEYE+EV+RD  DN +I+CSIEN D MG
Sbjct: 182  AYNREEFEEICARGLDLSPTKELLIDESLIGWKEYEMEVVRDKNDNCIIVCSIENFDAMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            +HTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGVE GGSNVQFAVNP +G ++VIEMN
Sbjct: 242  IHTGDSITVAPAQTLTDKEYQIMRNASMAVLREIGVETGGSNVQFAVNPKNGRLIVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT  +TPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGYTLDELMNDITGGRTPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            F FEKF G+   LTTQMKSVGE MA+GRT QES QKALR LE G +G+      +     
Sbjct: 362  FNFEKFAGANDRLTTQMKSVGEVMAIGRTQQESMQKALRGLEVGATGFDPKVSLDDPEAL 421

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
             +++  L+    +R+  I  A + G+ VD +  L+ ID+WFL Q +EL+ +E+ +  Q +
Sbjct: 422  TKIRRELKDAGAERIWYIADAFRAGLSVDGVFNLTNIDRWFLVQIEELVRLEEQVAEQGI 481

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
            + ++ D    +KR+GF+D ++A     +E E+R+ R    + P YKRVDTCAAEF  +T 
Sbjct: 482  NGLSADFLRMLKRKGFADARLAKLAGVSESEIRKLREQYNLHPVYKRVDTCAAEFSTDTA 541

Query: 627  YMYSSYDFECESAPTQ-KKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNS 685
            YMYS+Y+ ECE+ P Q ++K+++LGGGPNRIGQGIEFDYCC H + +L+  GYETIM+N 
Sbjct: 542  YMYSTYEEECEANPNQDREKIMVLGGGPNRIGQGIEFDYCCVHAALALREDGYETIMVNC 601

Query: 686  NPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEH 745
            NPETVSTDYDTSDRLYFEP+T+EDVL ++ +E+P+G+IVQ+GGQTPLKL+          
Sbjct: 602  NPETVSTDYDTSDRLYFEPVTLEDVLEIVRIEKPKGVIVQYGGQTPLKLA---------- 651

Query: 746  RLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEI 805
            R   A+G   V + GTSPD+ID AEDRERF   +  L ++QP      +   A+  AKEI
Sbjct: 652  RALEAAG---VPVIGTSPDAIDRAEDRERFQQAVDRLKLKQPANATVTAIEQAVEKAKEI 708

Query: 806  GYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALA 865
            GYP+VVRPSYVLGGRAMEIVY +  L  Y + AV V  + PVL+D++L DA+E+DVDA+ 
Sbjct: 709  GYPLVVRPSYVLGGRAMEIVYDEADLRRYFQTAVSVSNDAPVLLDRFLDDAVEVDVDAIC 768

Query: 866  DSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMN 925
            D    V+IGGIMEHIEQAGVHSGDSAC +P  T+S    D +     KLA  L V GLMN
Sbjct: 769  DG-EMVLIGGIMEHIEQAGVHSGDSACSLPAYTLSQEIQDVMRQQVQKLAFELQVRGLMN 827

Query: 926  CQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPK 985
             Q+A+  + +VYL+E NPRA+RTVPFVSKA G PLAK AA VM+GK+L++ G TKE+IP 
Sbjct: 828  VQFAVKDN-EVYLIEVNPRAARTVPFVSKATGVPLAKVAARVMAGKTLSEQGVTKEIIPP 886

Query: 986  HVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVF 1045
            + SVKE VLPF KF G D LLGPEMRSTGEVMG+  +F  AFAKAQ+ +   +   G   
Sbjct: 887  YYSVKEVVLPFNKFPGVDPLLGPEMRSTGEVMGVGRTFAEAFAKAQLGSNSTMKKHGRAL 946

Query: 1046 LSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVA 1105
            LS+ +  K  +  +A   L  GF++ +T GTA  L   GI    V K+HEGRPH  D + 
Sbjct: 947  LSVREGDKERVVDLAAKLLKFGFELDATHGTAIVLGEAGINPRLVNKVHEGRPHIQDRIK 1006

Query: 1106 NGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRS 1156
            NG+   ++ T++G    + D   +RR  L YKV   TT++G  A A A+ +
Sbjct: 1007 NGEYTYIINTTAGRQAIE-DSKLIRRSALQYKVHYDTTLNGGFATAMALNA 1056


>gi|429090624|ref|ZP_19153337.1| Carbamoyl-phosphate synthase large chain [Cronobacter dublinensis
            1210]
 gi|429095603|ref|ZP_19157709.1| Carbamoyl-phosphate synthase large chain [Cronobacter dublinensis
            582]
 gi|426281943|emb|CCJ83822.1| Carbamoyl-phosphate synthase large chain [Cronobacter dublinensis
            582]
 gi|426744974|emb|CCJ79450.1| Carbamoyl-phosphate synthase large chain [Cronobacter dublinensis
            1210]
          Length = 1074

 Score = 1227 bits (3175), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 615/1071 (57%), Positives = 783/1071 (73%), Gaps = 19/1071 (1%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILILGAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  E+V +++EKERPDA+LPTMGGQTALN A+ L   G LE++GV +IGA  DA
Sbjct: 63   ATYIEPIHWEVVRKIIEKERPDAVLPTMGGQTALNCALELERQGVLEEFGVTMIGATADA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  F  AMK IG++T  SGI +T+DE +++A ++G +P IIRP+FT+GGTGGGI
Sbjct: 123  IDKAEDRRRFDVAMKKIGLETARSGIAHTMDEALAVAADVG-YPCIIRPSFTMGGTGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEFE IC  GL  S T ++L+++SL+GWKEYE+EV+RD  DN +I+CSIEN D MG
Sbjct: 182  AYNREEFEEICARGLDLSPTKELLIDESLIGWKEYEMEVVRDKNDNCIIVCSIENFDAMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            +HTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGVE GGSNVQFAVNP +G ++VIEMN
Sbjct: 242  IHTGDSITVAPAQTLTDKEYQIMRNASMAVLREIGVETGGSNVQFAVNPKNGRLIVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT  +TPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKIAAKLAVGYTLDELMNDITGGRTPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            F FEKF G+   LTTQMKSVGE MA+GRT QES QKALR LE G +G+      +     
Sbjct: 362  FNFEKFAGANDRLTTQMKSVGEVMAIGRTQQESMQKALRGLEVGATGFDPKVSLDDPEAL 421

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
             +++  L+    +R+  I  A + G+ VD +  L+ ID+WFL Q +EL+ +E+ +  Q +
Sbjct: 422  TKIRRELKDAGAERIWYIADAFRAGLSVDGVFNLTNIDRWFLVQIEELVRLEEQVAEQGI 481

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
            + +  D    +KR+GF+D ++A     +E E+R+ R    + P YKRVDTCAAEF  +T 
Sbjct: 482  NGLDADFLRMLKRKGFADARLAKLAGVSESEIRKLREQYNLHPVYKRVDTCAAEFATDTA 541

Query: 627  YMYSSYDFECESAPTQ-KKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNS 685
            YMYS+Y+ ECE+ P Q ++K+++LGGGPNRIGQGIEFDYCC H + +L+  GYETIM+N 
Sbjct: 542  YMYSTYEDECEANPNQDREKIMVLGGGPNRIGQGIEFDYCCVHAALALREDGYETIMVNC 601

Query: 686  NPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEH 745
            NPETVSTDYDTSDRLYFEP+T+EDVL ++ +E+P+G+IVQ+GGQTPLKL+          
Sbjct: 602  NPETVSTDYDTSDRLYFEPVTLEDVLEIVRIEKPKGVIVQYGGQTPLKLA---------- 651

Query: 746  RLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEI 805
            R   A+G   V + GTSPD+ID AEDRERF   +  L ++QP      +   A+  AKEI
Sbjct: 652  RALEAAG---VPVIGTSPDAIDRAEDRERFQQAVDRLKLKQPANATVTAIEMAVEKAKEI 708

Query: 806  GYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALA 865
            GYP+VVRPSYVLGGRAMEIVY +  L  Y + AV V  + PVL+D++L DA+E+DVDA+ 
Sbjct: 709  GYPLVVRPSYVLGGRAMEIVYDEADLRRYFQTAVSVSNDAPVLLDRFLDDAVEVDVDAIC 768

Query: 866  DSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMN 925
            D    V+IGGIMEHIEQAGVHSGDSAC +P  T+S    D +     KLA  L V GLMN
Sbjct: 769  DG-EKVLIGGIMEHIEQAGVHSGDSACSLPAYTLSQEIQDVMRQQVQKLAFELQVRGLMN 827

Query: 926  CQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPK 985
             Q+A+  + +VYL+E NPRA+RTVPFVSKA G PLAK AA VM G++L++ G TKE+IP 
Sbjct: 828  VQFAVKDN-EVYLIEVNPRAARTVPFVSKATGVPLAKVAARVMVGQTLSEQGVTKEIIPP 886

Query: 986  HVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVF 1045
            + SVKE VLPF KF G D LLGPEMRSTGEVMG+  +F  AFAKAQ+ +   +   G   
Sbjct: 887  YYSVKEVVLPFNKFPGVDPLLGPEMRSTGEVMGVGRTFAEAFAKAQLGSNSTMKKQGRAL 946

Query: 1046 LSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVA 1105
            LS+ +  K  +  +A   L  GF++ +T GTA  L   GI    V K+HEGRPH  D + 
Sbjct: 947  LSVREGDKERVVDLAAKLLKFGFELDATHGTAIVLGEAGINPRLVNKVHEGRPHIQDRIK 1006

Query: 1106 NGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRS 1156
            NG+   ++ T++G    + D   +RR  L YKV   TT++G  A A A+ +
Sbjct: 1007 NGEYTYIINTTAGRQAIE-DSKLIRRSALQYKVHYDTTLNGGFATAMALNA 1056


>gi|187733854|ref|YP_001878857.1| carbamoyl phosphate synthase large subunit [Shigella boydii CDC
            3083-94]
 gi|187430846|gb|ACD10120.1| carbamoyl-phosphate synthase, large subunit [Shigella boydii CDC
            3083-94]
          Length = 1073

 Score = 1227 bits (3175), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 618/1071 (57%), Positives = 783/1071 (73%), Gaps = 19/1071 (1%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILILGAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  E+V +++EKERPDA+LPTMGGQTALN A+ L   G LE++GV +IGA  DA
Sbjct: 63   ATYIEPIHWEVVRKIIEKERPDAVLPTMGGQTALNCALELERQGVLEEFGVTMIGATADA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  F  AMK IG++T  SGI +T++E +++A ++G FP IIRP+FT+GG+GGGI
Sbjct: 123  IDKAEDRRRFDVAMKKIGLETARSGIAHTMEEALAVAADVG-FPCIIRPSFTMGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEFE IC  GL  S T ++L+++SL+GWKEYE+EV+RD  DN +I+CSIEN D MG
Sbjct: 182  AYNREEFEEICARGLDLSPTKELLIDESLIGWKEYEMEVVRDKNDNCIIVCSIENFDAMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            +HTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGVE GGSNVQFAVNP +G ++VIEMN
Sbjct: 242  IHTGDSITVAPAQTLTDKEYQIMRNASMAVLREIGVETGGSNVQFAVNPKNGRLIVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT  +TPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGYTLDELMNDITGGRTPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            F FEKF G+   LTTQMKSVGE MA+GRT QES QKALR LE G +G+      +     
Sbjct: 362  FNFEKFAGANDRLTTQMKSVGEVMAIGRTQQESLQKALRGLEVGATGFDPKVSLDDPEAL 421

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
             +++  L+    +R+  I  A + G+ VD +  L+ ID+WFL Q +EL+ +E+ +    +
Sbjct: 422  TKIRRELKDAGAERIWYIADAFRAGLSVDGVFNLTNIDRWFLVQIEELVRLEEKVAEVGI 481

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
            + +  +   ++KR+GF+D ++A      E E+R+ R    + P YKRVDTCAAEF  +T 
Sbjct: 482  TGLNAEFLRQLKRKGFADARLAKLAGVREAEIRKLRDQYDLHPVYKRVDTCAAEFATDTA 541

Query: 627  YMYSSYDFECESAP-TQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNS 685
            YMYS+Y+ ECE+ P T ++K+++LGGGPNRIGQGIEFDYCC H S +L+  GYETIM+N 
Sbjct: 542  YMYSTYEEECEANPSTDREKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVNC 601

Query: 686  NPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEH 745
            NPETVSTDYDTSDRLYFEP+T+EDVL ++ +E+P+G+IVQ+GGQTPLKL+          
Sbjct: 602  NPETVSTDYDTSDRLYFEPVTLEDVLEIVRIEKPKGVIVQYGGQTPLKLA---------- 651

Query: 746  RLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEI 805
            R   A+G   V + GTSPD+ID AEDRERF   ++ L ++QP      +   A+  AKEI
Sbjct: 652  RALEAAG---VPVIGTSPDAIDRAEDRERFQHAVERLKLKQPANATVTAIEMAVEKAKEI 708

Query: 806  GYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALA 865
            GYP+VVRPSYVLGGRAMEIVY +  L  Y + AV V  + PVL+D +L DA+E+DVDA+ 
Sbjct: 709  GYPLVVRPSYVLGGRAMEIVYDEADLRRYFQTAVSVSNDAPVLLDHFLDDAVEVDVDAIC 768

Query: 866  DSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMN 925
            D    V+IGGIMEHIEQAGVHSGDSAC +P  T+S    D +     KLA  L V GLMN
Sbjct: 769  DG-EMVLIGGIMEHIEQAGVHSGDSACSLPAYTLSQEIQDVMRQQVQKLAFELQVRGLMN 827

Query: 926  CQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPK 985
             Q+A+  + +VYL+E NPRA+RTVPFVSKA G PLAK AA VM+GKSL +LG TKEVIP 
Sbjct: 828  VQFAVKNN-EVYLIEVNPRAARTVPFVSKATGVPLAKVAARVMAGKSLAELGVTKEVIPP 886

Query: 986  HVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVF 1045
            + SVKE VLPF KF G D LLGPEMRSTGEVMG+  +F  AFAKAQ+ +   +   G   
Sbjct: 887  YYSVKEVVLPFNKFPGVDPLLGPEMRSTGEVMGVGRTFAEAFAKAQLGSNSTMKKHGRAL 946

Query: 1046 LSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVA 1105
            LS+ +  K  +  +A   L  GF++ +T GTA  L   GI    V K+HEGRPH  D + 
Sbjct: 947  LSVREGDKERVVDLAAKLLKQGFELDATHGTAIVLGEAGINPRLVNKVHEGRPHIQDRIK 1006

Query: 1106 NGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRS 1156
            NG+   ++ T+SG    + D   +RR  L YKV   TT++G  A A A+ +
Sbjct: 1007 NGEYTYIINTTSGRRAIE-DSRVIRRSALQYKVHYDTTLNGGFATAMALNA 1056


>gi|425303541|ref|ZP_18693357.1| carbamoyl-phosphate synthase large chain [Escherichia coli N1]
 gi|408232824|gb|EKI55989.1| carbamoyl-phosphate synthase large chain [Escherichia coli N1]
          Length = 1073

 Score = 1227 bits (3175), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 619/1071 (57%), Positives = 781/1071 (72%), Gaps = 19/1071 (1%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILILGAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  E+V +++EKERPDA+LPTMGGQTALN A+ L   G LE++GV +IGA  DA
Sbjct: 63   ATYIEPIHWEVVRKIIEKERPDAVLPTMGGQTALNCALELERQGVLEEFGVTMIGATADA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  F  AMK IG++T  SGI +T++E +++A ++G FP IIRP+FT+GG+GGGI
Sbjct: 123  IDKAEDRRRFDVAMKKIGLETARSGIAHTMEEALAVAADVG-FPCIIRPSFTMGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEFE IC  GL  S T ++L+++SL+GWKEYE+EV+RD  DN +I+CSIEN D MG
Sbjct: 182  AYNREEFEEICARGLDLSPTKELLIDESLIGWKEYEMEVVRDKNDNCIIVCSIENFDAMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            +HTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGVE GGSNVQFAVNP +G ++VIEMN
Sbjct: 242  IHTGDSITVAPAQTLTDKEYQIMRNASMAVLREIGVETGGSNVQFAVNPKNGRLIVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT  +TPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGYTLDELMNDITGGRTPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            F FEKF G+   LTTQMKSVGE MA+GRT QES QKALR LE G +G+      +     
Sbjct: 362  FNFEKFAGANDRLTTQMKSVGEVMAIGRTQQESLQKALRGLEVGATGFDPKVSLDDPEAL 421

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
             +++  L+    DR+  I  A + G+ VD +  L+ ID+WFL Q +EL+ +E+ +    +
Sbjct: 422  TKIRRELKDAGADRIWYIADAFRAGLSVDGVFNLTNIDRWFLVQIEELVRLEEKVAEVGI 481

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
            + +  D   ++KR+GF+D ++A      E E+R+ R    + P YKRVDTCAAEF  +T 
Sbjct: 482  TGLNADFLRQLKRKGFADARLAKLAGVREAEIRKLRDQYDLHPVYKRVDTCAAEFATDTA 541

Query: 627  YMYSSYDFECESAP-TQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNS 685
            YMYS+Y+ ECE+ P T ++K+++LGGGPNRIGQGIEFDYCC H S +L+  GYETIM+N 
Sbjct: 542  YMYSTYEEECEANPSTDREKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVNC 601

Query: 686  NPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEH 745
            NPETVSTDYDTSDRLYFEP+T+EDVL ++ +E+P+G+IVQ+GGQTPLKL+          
Sbjct: 602  NPETVSTDYDTSDRLYFEPVTLEDVLEIVRIEKPKGVIVQYGGQTPLKLA---------- 651

Query: 746  RLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEI 805
            R   A+G   V + GTSPD+ID AEDRERF   +  L ++QP      +   A+  AKEI
Sbjct: 652  RALEAAG---VPVIGTSPDAIDRAEDRERFQHAVDRLKLKQPANATVTAIEMAVEKAKEI 708

Query: 806  GYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALA 865
            GYP+VVRPSYVLGGRAMEIVY +  L  Y + AV V  + PVL+D +L DA+E+DVDA+ 
Sbjct: 709  GYPLVVRPSYVLGGRAMEIVYDEADLRRYFQTAVSVSNDAPVLLDHFLDDAVEVDVDAIC 768

Query: 866  DSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMN 925
            D    V+IGGIMEHIEQAGVHSGDSAC +P  T+S    D +     KLA  L V GLMN
Sbjct: 769  DG-EMVLIGGIMEHIEQAGVHSGDSACSLPAYTLSQEIQDVMRQQVQKLAFELQVRGLMN 827

Query: 926  CQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPK 985
             Q+A+  + +VYL+E NPRA+RTVPFVSKA G PLAK AA VM+GKSL + G TKEVIP 
Sbjct: 828  VQFAVKNN-EVYLIEVNPRAARTVPFVSKATGVPLAKVAARVMAGKSLAEQGVTKEVIPP 886

Query: 986  HVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVF 1045
            + SVKE VLPF KF G D LLGPEMRSTGEVMG+  +F  AFAKAQ+ +   +   G   
Sbjct: 887  YYSVKEVVLPFNKFPGVDPLLGPEMRSTGEVMGVGRTFAEAFAKAQLGSNSTMKKHGRAL 946

Query: 1046 LSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVA 1105
            LS+ +  K  +  +A   L  GF++ +T GTA  L   GI    V K+HEGRPH  D + 
Sbjct: 947  LSVREGDKERVVDLAAKLLKQGFELDATHGTAIVLGEAGINPRLVNKVHEGRPHIQDRIK 1006

Query: 1106 NGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRS 1156
            NG+   ++ T+SG    + D   +RR  L YKV   TT++G  A A A+ +
Sbjct: 1007 NGEYTYIINTTSGRRAIE-DSRVIRRSALQYKVHYDTTLNGGFATAMALNA 1056


>gi|416526214|ref|ZP_11742268.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Montevideo str. LQC 10]
 gi|416533344|ref|ZP_11746312.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Montevideo str. SARB30]
 gi|416555375|ref|ZP_11758860.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Montevideo str. 29N]
 gi|363558279|gb|EHL42472.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Montevideo str. LQC 10]
 gi|363560192|gb|EHL44339.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Montevideo str. 29N]
 gi|363568628|gb|EHL52606.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Montevideo str. SARB30]
          Length = 1075

 Score = 1227 bits (3175), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 617/1078 (57%), Positives = 784/1078 (72%), Gaps = 19/1078 (1%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILILGAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  E+V +++EKERPDA+LPTMGGQTALN A+ L   G LE++GV +IGA  DA
Sbjct: 63   ATYIEPIHWEVVRKIIEKERPDAVLPTMGGQTALNCALELERQGVLEEFGVTMIGATADA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  F  AMK IG+ T  SGI +T++E +++A ++G FP IIRP+FT+GGTGGGI
Sbjct: 123  IDKAEDRRRFDIAMKKIGLDTARSGIAHTMEEALAVAADVG-FPCIIRPSFTMGGTGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEFE IC+ GL  S T+++L+++SL+GWKEYE+EV+RD  DN +I+CSIEN D MG
Sbjct: 182  AYNREEFEEICERGLDLSPTNELLIDESLIGWKEYEMEVVRDKNDNCIIVCSIENFDAMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            +HTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGVE GGSNVQFAVNP +G ++VIEMN
Sbjct: 242  IHTGDSITVAPAQTLTDKEYQIMRNASMAVLREIGVETGGSNVQFAVNPKNGRLIVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT  +TPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGYTLDELMNDITGGRTPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            F FEKF G+   LTTQMKSVGE MA+GRT QES QKALR LE G +G+      +     
Sbjct: 362  FNFEKFAGANDRLTTQMKSVGEVMAIGRTQQESLQKALRGLEVGATGFDPKVSLDDPEAL 421

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
             +++  L+    DR+  I  A + G+ VD +  L+ ID+WFL Q +EL+ +E+ +    +
Sbjct: 422  TKIRRELKDAGADRIWYIADAFRAGLSVDGVFNLTNIDRWFLVQIEELVRLEEKVAEVGI 481

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
            + +  D   ++KR+GF+D ++A      E E+R+ R    + P YKRVDTCAAEF  +T 
Sbjct: 482  TGLNADFLRQLKRKGFADARLAKLAGVREAEIRKLRDQYDLHPVYKRVDTCAAEFATDTA 541

Query: 627  YMYSSYDFECESAPT-QKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNS 685
            YMYS+Y+ ECE+ P+  + K+++LGGGPNRIGQGIEFDYCC H S +L+  GYETIM+N 
Sbjct: 542  YMYSTYENECEANPSVDRDKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVNC 601

Query: 686  NPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEH 745
            NPETVSTDYDTSDRLYFEP+T+EDVL ++ +E+P+G+IVQ+GGQTPLKL+          
Sbjct: 602  NPETVSTDYDTSDRLYFEPVTLEDVLEIVRIEKPKGVIVQYGGQTPLKLA---------- 651

Query: 746  RLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEI 805
            R   A+G   V + GTSPD+ID AEDRERF   +  L ++QP      +   A+  AKEI
Sbjct: 652  RALEAAG---VPVIGTSPDAIDRAEDRERFQHAVDRLKLKQPANATVTAIEQAVEKAKEI 708

Query: 806  GYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALA 865
            GYP+VVRPSYVLGGRAMEIVY +  L  Y + AV V  + PVL+D++L DA+E+DVDA+ 
Sbjct: 709  GYPLVVRPSYVLGGRAMEIVYDEADLRRYFQTAVSVSNDAPVLLDRFLDDAVEVDVDAIC 768

Query: 866  DSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMN 925
            D    V+IGGIMEHIEQAGVHSGDSAC +P  T+S    D +     KLA  L V GLMN
Sbjct: 769  DG-EMVLIGGIMEHIEQAGVHSGDSACSLPAYTLSQEIQDVMRQQVQKLAFELQVRGLMN 827

Query: 926  CQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPK 985
             Q+A+  + +VYL+E NPRA+RTVPFVSKA G PLAK AA VM+GKSL + G T+E+IP 
Sbjct: 828  VQFAVKDN-EVYLIEVNPRAARTVPFVSKATGVPLAKVAARVMAGKSLTEQGVTQEIIPP 886

Query: 986  HVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVF 1045
            + SVKE VLPF KF G D LLGPEMRSTGEVMG+  +F  AFAKAQ+ +   +   G   
Sbjct: 887  YYSVKEVVLPFNKFPGVDPLLGPEMRSTGEVMGVGRTFAEAFAKAQLGSNSTMKKQGRAL 946

Query: 1046 LSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVA 1105
            LS+ +  K  +  +A   L  GF++ +T GTA  L   GI    V K+HEGRPH  D + 
Sbjct: 947  LSVREGDKERVVDLAAKLLKQGFELDATHGTAIVLGEAGINPRLVNKVHEGRPHIQDRIK 1006

Query: 1106 NGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTVT 1163
            NG+   ++ T++G    + D   +RR  L YKV   TT++G  A   A+ +  +  VT
Sbjct: 1007 NGEYTYIINTTAGRRAIE-DSRVIRRSALQYKVHYDTTLNGGFATTMALNADATEKVT 1063


>gi|91226825|ref|ZP_01261478.1| carbamoyl-phosphate synthase large subunit [Vibrio alginolyticus
            12G01]
 gi|254229693|ref|ZP_04923103.1| carbamoyl-phosphate synthase, large subunit [Vibrio sp. Ex25]
 gi|262395247|ref|YP_003287101.1| carbamoyl-phosphate synthase large chain [Vibrio sp. Ex25]
 gi|269967374|ref|ZP_06181434.1| carbamoyl-phosphate synthase large subunit [Vibrio alginolyticus 40B]
 gi|91188956|gb|EAS75240.1| carbamoyl-phosphate synthase large subunit [Vibrio alginolyticus
            12G01]
 gi|151937814|gb|EDN56662.1| carbamoyl-phosphate synthase, large subunit [Vibrio sp. Ex25]
 gi|262338841|gb|ACY52636.1| carbamoyl-phosphate synthase large chain [Vibrio sp. Ex25]
 gi|269827962|gb|EEZ82236.1| carbamoyl-phosphate synthase large subunit [Vibrio alginolyticus 40B]
          Length = 1077

 Score = 1227 bits (3175), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 613/1063 (57%), Positives = 776/1063 (73%), Gaps = 18/1063 (1%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILILGAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIQSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  E+V +++EKERPDA+LPTMGGQTALN A+ L + G L ++GVE+IGA  DA
Sbjct: 63   ATYIEPIQWEVVRKIIEKERPDAVLPTMGGQTALNCALDLEKHGVLAEFGVEMIGATADA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  F +AMK+IG++ P +    +++E   + + +G FP IIRP+FT+GGTGGGI
Sbjct: 123  IDKAEDRSRFDKAMKSIGLECPRADTAKSMEEAYKVLDMVG-FPCIIRPSFTMGGTGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYNKEEFE IC+ GL  S T+++L+++SL+GWKEYE+EV+RD ADN +I+CSIEN DPMG
Sbjct: 182  AYNKEEFEEICRRGLDLSPTNELLIDESLIGWKEYEMEVVRDKADNCIIVCSIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            +HTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGVE GGSNVQF +NP DG +++IEMN
Sbjct: 242  IHTGDSITVAPAQTLTDKEYQLMRNASLAVLREIGVETGGSNVQFGINPKDGRMVIIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VG++LD++ NDIT   TPASFEP+IDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKIAAKLAVGFTLDELQNDITGGATPASFEPTIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            F FEKF G+   LTTQMKSVGE MA+GR  QES  KALR LE G +G+      E     
Sbjct: 362  FNFEKFAGANDRLTTQMKSVGEVMAIGRNQQESLHKALRGLEVGATGFDEMVDLEAPDAL 421

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
             ++++ L+    +R+  I  A + GM VD +  L+ ID+WFL Q +E++ +E+ +     
Sbjct: 422  TKIRHELKEAGAERIWYIADAFRAGMSVDGVFNLTQIDRWFLVQIEEIVKLEEQVKAGGY 481

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
            + +TK+   ++KR+GFSD +++      E E+R  R    + P YKRVDTCAAEF ++T 
Sbjct: 482  AGLTKEVLRQMKRKGFSDARLSKLLGVAESEIRRAREQFDIHPVYKRVDTCAAEFSSDTA 541

Query: 627  YMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSN 686
            YMYSSYD ECE+ PT K K+++LGGGPNRIGQGIEFDYCC H S +L+  GYETIM+N N
Sbjct: 542  YMYSSYDEECEANPTDKDKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVNCN 601

Query: 687  PETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHR 746
            PETVSTDYDTSDRLYFEP+T+EDVL++  +E+P+G+IVQ+GGQTPLKL+          R
Sbjct: 602  PETVSTDYDTSDRLYFEPVTLEDVLSIARVEKPKGVIVQYGGQTPLKLA----------R 651

Query: 747  LPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEIG 806
               A+G   V I GTSPD+ID AEDRERF A +  L + QP+     +   A+  +KEIG
Sbjct: 652  ALEAAG---VPIIGTSPDAIDRAEDRERFQAAVDRLGLLQPENATVTTMEQAVEKSKEIG 708

Query: 807  YPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALAD 866
            +P+VVRPSYVLGGRAMEIVY ++ L  Y   AV V  E PVL+D++L DA E+D+DA+ D
Sbjct: 709  FPLVVRPSYVLGGRAMEIVYDEQDLRRYFNEAVSVSNESPVLLDRFLDDATEVDIDAICD 768

Query: 867  SCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNC 926
                VVIGGIMEHIEQAGVHSGDSAC +P  T+S    D +     KLA  L V GLMN 
Sbjct: 769  G-ERVVIGGIMEHIEQAGVHSGDSACSLPAYTLSQEIQDKMREQVEKLAFELGVRGLMNT 827

Query: 927  QYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPKH 986
            Q+A+  + DVYL+E NPRA+RTVPFVSKA G PLAK AA VM+G+SL   GFTKE+IP +
Sbjct: 828  QFAVKDN-DVYLIEVNPRAARTVPFVSKATGAPLAKIAARVMAGQSLESQGFTKEIIPPY 886

Query: 987  VSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVFL 1046
             SVKE VLPF KF G D LLGPEMRSTGEVMG+  +F  A+AKA++  G   P  G   L
Sbjct: 887  YSVKEVVLPFNKFPGVDPLLGPEMRSTGEVMGVGATFAEAYAKAELGCGAVYPEGGRALL 946

Query: 1047 SLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVAN 1106
            S+ +  K  +  +A   + +G+++ +T GTA  L   GI    V K+HEGRPH  D + N
Sbjct: 947  SVREGDKERVVDLASKLVKLGYQLDATHGTAVILGEAGINPRLVNKVHEGRPHILDRIKN 1006

Query: 1107 GQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALA 1149
             +   +V T++G    + D   LRR  LA KV   TT++ A A
Sbjct: 1007 NEYTYIVNTAAGRQAIE-DSKVLRRGALAEKVNYTTTLNAAFA 1048



 Score =  256 bits (653), Expect = 7e-65,   Method: Compositional matrix adjust.
 Identities = 163/429 (37%), Positives = 246/429 (57%), Gaps = 26/429 (6%)

Query: 67  KIDS-SAELSNGAA---SSKDQKL-GKRTDLRKILILGAGPIVIGQACEFDYSGTQACKA 121
           ++D+ +AE S+  A   SS D++     TD  KI++LG GP  IGQ  EFDY    A  A
Sbjct: 528 RVDTCAAEFSSDTAYMYSSYDEECEANPTDKDKIMVLGGGPNRIGQGIEFDYCCVHASLA 587

Query: 122 LKEEGYEVILINSNPATIMTDPGLADRTYITPMTPELVEQVLEKERPDALLPTMGGQTAL 181
           L+E+GYE I++N NP T+ TD   +DR Y  P+T E V  +   E+P  ++   GGQT L
Sbjct: 588 LREDGYETIMVNCNPETVSTDYDTSDRLYFEPVTLEDVLSIARVEKPKGVIVQYGGQTPL 647

Query: 182 NLAVALAESGALEKYGVELIGAKLDAIKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECI 241
            LA       ALE  GV +IG   DAI +AEDR+ F+ A+  +G+  P +    T+++ +
Sbjct: 648 KLA------RALEAAGVPIIGTSPDAIDRAEDRERFQAAVDRLGLLQPENATVTTMEQAV 701

Query: 242 SIANEIGEFPLIIRPAFTLGGTGGGIAYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKE 301
             + EIG FPL++RP++ LGG    I Y++++        ++ S  S VL+++ L    E
Sbjct: 702 EKSKEIG-FPLVVRPSYVLGGRAMEIVYDEQDLRRYFNEAVSVSNESPVLLDRFLDDATE 760

Query: 302 YELEVMRDLADNVVIICSIENVDPMGVHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREI 361
            +++ + D  + VVI   +E+++  GVH+GDS    PA TL+ +   ++R+    +  E+
Sbjct: 761 VDIDAICD-GERVVIGGIMEHIEQAGVHSGDSACSLPAYTLSQEIQDKMREQVEKLAFEL 819

Query: 362 GVECGGSNVQFAVNPVDGEVMVIEMNPRVSRSSALASKATGFPIAKMAAKLSVGYSLDQI 421
           GV  G  N QFAV   D +V +IE+NPR +R+    SKATG P+AK+AA++  G SL+  
Sbjct: 820 GVR-GLMNTQFAVK--DNDVYLIEVNPRAARTVPFVSKATGAPLAKIAARVMAGQSLES- 875

Query: 422 PNDITKKTPASFEPSIDYVVTKIPRFAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQ 481
               TK+    +     Y V ++    F KFPG +PLL  +M+S GE M +G TF E++ 
Sbjct: 876 -QGFTKEIIPPY-----YSVKEVV-LPFNKFPGVDPLLGPEMRSTGEVMGVGATFAEAYA 928

Query: 482 KALRSLECG 490
           KA   L CG
Sbjct: 929 KA--ELGCG 935


>gi|16763457|ref|NP_459072.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Typhimurium str. LT2]
 gi|167989925|ref|ZP_02571025.1| carbamoyl-phosphate synthase, large subunit [Salmonella enterica
            subsp. enterica serovar 4,[5],12:i:- str. CVM23701]
 gi|197262871|ref|ZP_03162945.1| carbamoyl-phosphate synthase, large subunit [Salmonella enterica
            subsp. enterica serovar Saintpaul str. SARA23]
 gi|374982410|ref|ZP_09723731.1| Carbamoyl-phosphate synthase large chain [Salmonella enterica subsp.
            enterica serovar Typhimurium str. TN061786]
 gi|378443521|ref|YP_005231153.1| carbamoyl-phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Typhimurium str. D23580]
 gi|378448352|ref|YP_005235711.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Typhimurium str. 14028S]
 gi|378698050|ref|YP_005180007.1| carbamoyl-phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Typhimurium str. SL1344]
 gi|378982609|ref|YP_005245764.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Typhimurium str. T000240]
 gi|378987472|ref|YP_005250636.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Typhimurium str. UK-1]
 gi|379699286|ref|YP_005241014.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Typhimurium str. ST4/74]
 gi|383494892|ref|YP_005395581.1| carbamoyl-phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Typhimurium str. 798]
 gi|422024181|ref|ZP_16370676.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Typhimurium str. STm1]
 gi|422029197|ref|ZP_16375471.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Typhimurium str. STm2]
 gi|427560189|ref|ZP_18930739.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Typhimurium str. STm9]
 gi|427579466|ref|ZP_18935528.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Typhimurium str. STm3]
 gi|427601103|ref|ZP_18940342.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Typhimurium str. STm4]
 gi|427625405|ref|ZP_18945247.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Typhimurium str. STm6]
 gi|427648861|ref|ZP_18950008.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Typhimurium str. STm10]
 gi|427659395|ref|ZP_18954959.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Typhimurium str. STm11]
 gi|427664509|ref|ZP_18959706.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Typhimurium str. STm12]
 gi|20143903|sp|P14846.4|CARB_SALTY RecName: Full=Carbamoyl-phosphate synthase large chain; AltName:
            Full=Carbamoyl-phosphate synthetase ammonia chain
 gi|16418563|gb|AAL19031.1| carbamoyl-phosphate synthase, large subunit [Salmonella enterica
            subsp. enterica serovar Typhimurium str. LT2]
 gi|197241126|gb|EDY23746.1| carbamoyl-phosphate synthase, large subunit [Salmonella enterica
            subsp. enterica serovar Saintpaul str. SARA23]
 gi|205331328|gb|EDZ18092.1| carbamoyl-phosphate synthase, large subunit [Salmonella enterica
            subsp. enterica serovar 4,[5],12:i:- str. CVM23701]
 gi|261245300|emb|CBG23086.1| carbamoyl-phosphate synthase large chain [Salmonella enterica subsp.
            enterica serovar Typhimurium str. D23580]
 gi|267991730|gb|ACY86615.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Typhimurium str. 14028S]
 gi|301156698|emb|CBW16169.1| carbamoyl-phosphate synthase large chain [Salmonella enterica subsp.
            enterica serovar Typhimurium str. SL1344]
 gi|312911037|dbj|BAJ35011.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Typhimurium str. T000240]
 gi|321222364|gb|EFX47436.1| Carbamoyl-phosphate synthase large chain [Salmonella enterica subsp.
            enterica serovar Typhimurium str. TN061786]
 gi|323128385|gb|ADX15815.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Typhimurium str. ST4/74]
 gi|332987019|gb|AEF06002.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Typhimurium str. UK-1]
 gi|380461713|gb|AFD57116.1| carbamoyl-phosphate synthase large chain [Salmonella enterica subsp.
            enterica serovar Typhimurium str. 798]
 gi|414024448|gb|EKT07826.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Typhimurium str. STm1]
 gi|414026548|gb|EKT09814.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Typhimurium str. STm2]
 gi|414038722|gb|EKT21425.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Typhimurium str. STm9]
 gi|414039217|gb|EKT21895.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Typhimurium str. STm3]
 gi|414043672|gb|EKT26158.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Typhimurium str. STm4]
 gi|414052892|gb|EKT34915.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Typhimurium str. STm10]
 gi|414054485|gb|EKT36432.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Typhimurium str. STm6]
 gi|414058393|gb|EKT40060.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Typhimurium str. STm11]
 gi|414062322|gb|EKT43644.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Typhimurium str. STm12]
          Length = 1075

 Score = 1227 bits (3175), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 617/1078 (57%), Positives = 784/1078 (72%), Gaps = 19/1078 (1%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILILGAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  E+V +++EKERPDA+LPTMGGQTALN A+ L   G LE++GV +IGA  DA
Sbjct: 63   ATYIEPIHWEVVRKIIEKERPDAVLPTMGGQTALNCALELERQGVLEEFGVTMIGATADA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  F  AMK IG+ T  SGI +T++E +++A ++G FP IIRP+FT+GGTGGGI
Sbjct: 123  IDKAEDRRRFDIAMKKIGLDTARSGIAHTMEEALAVAADVG-FPCIIRPSFTMGGTGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEFE IC+ GL  S T+++L+++SL+GWKEYE+EV+RD  DN +I+CSIEN D MG
Sbjct: 182  AYNREEFEEICERGLDLSPTNELLIDESLIGWKEYEMEVVRDKNDNCIIVCSIENFDAMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            +HTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGVE GGSNVQFAVNP +G ++VIEMN
Sbjct: 242  IHTGDSITVAPAQTLTDKEYQIMRNASMAVLREIGVETGGSNVQFAVNPKNGRLIVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT  +TPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGYTLDELMNDITGGRTPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            F FEKF G+   LTTQMKSVGE MA+GRT QES QKALR LE G +G+      +     
Sbjct: 362  FNFEKFAGANDRLTTQMKSVGEVMAIGRTQQESLQKALRGLEVGATGFDPKVSLDDPEAL 421

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
             +++  L+    DR+  I  A + G+ VD +  L+ ID+WFL Q +EL+ +E+ +    +
Sbjct: 422  TKIRRELKDAGADRIWYIADAFRAGLSVDGVFNLTNIDRWFLVQIEELVRLEEKVAEVGI 481

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
            + +  D   ++KR+GF+D ++A      E E+R+ R    + P YKRVDTCAAEF  +T 
Sbjct: 482  TGLNADFLRQLKRKGFADARLAKLAGVREAEIRKLRDQYDLHPVYKRVDTCAAEFATDTA 541

Query: 627  YMYSSYDFECESAPT-QKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNS 685
            YMYS+Y+ ECE+ P+  + K+++LGGGPNRIGQGIEFDYCC H S +L+  GYETIM+N 
Sbjct: 542  YMYSTYEDECEANPSIDRDKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVNC 601

Query: 686  NPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEH 745
            NPETVSTDYDTSDRLYFEP+T+EDVL ++ +E+P+G+IVQ+GGQTPLKL+          
Sbjct: 602  NPETVSTDYDTSDRLYFEPVTLEDVLEIVRIEKPKGVIVQYGGQTPLKLA---------- 651

Query: 746  RLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEI 805
            R   A+G   V + GTSPD+ID AEDRERF   +  L ++QP      +   A+  AKEI
Sbjct: 652  RALEAAG---VPVIGTSPDAIDRAEDRERFQHAVDRLKLKQPANATVTAIEQAVEKAKEI 708

Query: 806  GYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALA 865
            GYP+VVRPSYVLGGRAMEIVY +  L  Y + AV V  + PVL+D++L DA+E+DVDA+ 
Sbjct: 709  GYPLVVRPSYVLGGRAMEIVYDEADLRRYFQTAVSVSNDAPVLLDRFLDDAVEVDVDAIC 768

Query: 866  DSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMN 925
            D    V+IGGIMEHIEQAGVHSGDSAC +P  T+S    D +     KLA  L V GLMN
Sbjct: 769  DG-EMVLIGGIMEHIEQAGVHSGDSACSLPAYTLSQEIQDVMRQQVQKLAFELQVRGLMN 827

Query: 926  CQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPK 985
             Q+A+  + +VYL+E NPRA+RTVPFVSKA G PLAK AA VM+GKSL + G T+E+IP 
Sbjct: 828  VQFAVKDN-EVYLIEVNPRAARTVPFVSKATGVPLAKVAARVMAGKSLTEQGVTQEIIPP 886

Query: 986  HVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVF 1045
            + SVKE VLPF KF G D LLGPEMRSTGEVMG+  +F  AFAKAQ+ +   +   G   
Sbjct: 887  YYSVKEVVLPFNKFPGVDPLLGPEMRSTGEVMGVGRTFAEAFAKAQLGSNSTMKKQGRAL 946

Query: 1046 LSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVA 1105
            LS+ +  K  +  +A   L  GF++ +T GTA  L   GI    V K+HEGRPH  D + 
Sbjct: 947  LSVREGDKERVVDLAAKLLKQGFELDATHGTAIVLGEAGINPRLVNKVHEGRPHIQDRIK 1006

Query: 1106 NGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTVT 1163
            NG+   ++ T++G    + D   +RR  L YKV   TT++G  A   A+ +  +  VT
Sbjct: 1007 NGEYTYIINTTAGRRAIE-DSRVIRRSALQYKVHYDTTLNGGFATTMALNADATEKVT 1063


>gi|422806755|ref|ZP_16855186.1| carbamoyl-phosphate synthase [Escherichia fergusonii B253]
 gi|424814943|ref|ZP_18240094.1| carbamoyl phosphate synthase large subunit [Escherichia fergusonii
            ECD227]
 gi|324112566|gb|EGC06543.1| carbamoyl-phosphate synthase [Escherichia fergusonii B253]
 gi|325495963|gb|EGC93822.1| carbamoyl phosphate synthase large subunit [Escherichia fergusonii
            ECD227]
          Length = 1074

 Score = 1227 bits (3175), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 619/1071 (57%), Positives = 781/1071 (72%), Gaps = 19/1071 (1%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILILGAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  E+V +++EKERPDA+LPTMGGQTALN A+ L   G LE++GV +IGA  DA
Sbjct: 63   ATYIEPIHWEVVRKIIEKERPDAVLPTMGGQTALNCALELERQGVLEEFGVTMIGATADA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  F  AMK IG++T  SGI +T++E +++A E+G FP IIRP+FT+GG+GGGI
Sbjct: 123  IDKAEDRRRFDVAMKKIGLETARSGIAHTMEEALAVAAEVG-FPCIIRPSFTMGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEFE IC  GL  S T ++L+++SL+GWKEYE+EV+RD  DN +I+CSIEN D MG
Sbjct: 182  AYNREEFEEICARGLDLSPTKELLIDESLIGWKEYEMEVVRDKNDNCIIVCSIENFDAMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            +HTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGVE GGSNVQFAVNP +G ++VIEMN
Sbjct: 242  IHTGDSITVAPAQTLTDKEYQIMRNASMAVLREIGVETGGSNVQFAVNPKNGRLIVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT  +TPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGYTLDELMNDITGGRTPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            F FEKF G+   LTTQMKSVGE MA+GRT QES QKALR LE G +G+      +     
Sbjct: 362  FNFEKFAGANDRLTTQMKSVGEVMAIGRTQQESLQKALRGLEVGATGFDPKVSLDDPEAL 421

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
             +++  L+    +R+  I  A + G+ VD +  L+ ID+WFL Q +EL+ +E+ +    +
Sbjct: 422  TKIRRELKDAGAERIWYIADAFRAGLSVDGVFNLTNIDRWFLVQIEELVRLEEKVAEVGI 481

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
            + +  D   ++KR+GF+D ++A      E E+R+ R    + P YKRVDTCAAEF  +T 
Sbjct: 482  TGLNADFLRQLKRKGFADARLAKLAGVREAEIRKLRDQYDLHPVYKRVDTCAAEFATDTA 541

Query: 627  YMYSSYDFECESAP-TQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNS 685
            YMYS+Y+ ECE+ P T ++K+++LGGGPNRIGQGIEFDYCC H S +L+  GYETIM+N 
Sbjct: 542  YMYSTYEEECEANPSTDREKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVNC 601

Query: 686  NPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEH 745
            NPETVSTDYDTSDRLYFEP+T+EDVL ++ +E+P+G+IVQ+GGQTPLKL+          
Sbjct: 602  NPETVSTDYDTSDRLYFEPVTLEDVLEIVRIEKPKGVIVQYGGQTPLKLA---------- 651

Query: 746  RLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEI 805
            R   A+G   V + GTSPD+ID AEDRERF   +  L ++QP      +   A+  AKEI
Sbjct: 652  RALEAAG---VPVIGTSPDAIDRAEDRERFQHAVDRLKLKQPANATVTAIEMAVEKAKEI 708

Query: 806  GYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALA 865
            GYP+VVRPSYVLGGRAMEIVY +  L  Y + AV V  + PVL+D +L DA+E+DVDA+ 
Sbjct: 709  GYPLVVRPSYVLGGRAMEIVYDEADLRRYFQTAVSVSNDAPVLLDHFLDDAVEVDVDAIC 768

Query: 866  DSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMN 925
            D    V+IGGIMEHIEQAGVHSGDSAC +P  T+S    D +     KLA  L V GLMN
Sbjct: 769  DG-EMVLIGGIMEHIEQAGVHSGDSACSLPAYTLSQEIQDVMRQQVQKLAFELQVRGLMN 827

Query: 926  CQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPK 985
             Q+A+  + +VYL+E NPRA+RTVPFVSKA G PLAK AA VM+GKSL + G TKEVIP 
Sbjct: 828  VQFAVKNN-EVYLIEVNPRAARTVPFVSKATGVPLAKVAARVMAGKSLAEQGVTKEVIPP 886

Query: 986  HVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVF 1045
            + SVKE VLPF KF G D LLGPEMRSTGEVMG+  +F  AFAKAQ+ +   +   G   
Sbjct: 887  YYSVKEVVLPFNKFPGVDPLLGPEMRSTGEVMGVGRTFAEAFAKAQLGSNSTMKKHGRAL 946

Query: 1046 LSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVA 1105
            LS+ +  K  +  +A   L  GF++ +T GTA  L   GI    V K+HEGRPH  D + 
Sbjct: 947  LSVREGDKERVVDLAAKLLKQGFELDATHGTAIVLGEAGINPRLVNKVHEGRPHIQDRIK 1006

Query: 1106 NGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRS 1156
            NG+   ++ T+SG    + D   +RR  L YKV   TT++G  A A A+ +
Sbjct: 1007 NGEYTYIINTTSGRRAIE-DSRVIRRSALQYKVHYDTTLNGGFATAMALNA 1056


>gi|389842278|ref|YP_006344362.1| carbamoyl phosphate synthase large subunit [Cronobacter sakazakii
            ES15]
 gi|387852754|gb|AFK00852.1| carbamoyl phosphate synthase large subunit [Cronobacter sakazakii
            ES15]
          Length = 1074

 Score = 1227 bits (3175), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 614/1071 (57%), Positives = 783/1071 (73%), Gaps = 19/1071 (1%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILILGAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  E+V +++EKERPDA+LPTMGGQTALN A+ L   G LE++GV +IGA  DA
Sbjct: 63   ATYIEPIHWEVVRKIIEKERPDAVLPTMGGQTALNCALELERQGVLEEFGVTMIGATADA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  F  AMK IG+ T  SGI + ++E +++A ++G +P IIRP+FT+GGTGGGI
Sbjct: 123  IDKAEDRRRFDVAMKKIGLDTARSGIAHNMEEALAVAADVG-YPCIIRPSFTMGGTGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEFE IC  GL  S T ++L+++SL+GWKEYE+EV+RD  DN +I+CSIEN D MG
Sbjct: 182  AYNREEFEEICARGLDLSPTKELLIDESLIGWKEYEMEVVRDKNDNCIIVCSIENFDAMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            +HTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGVE GGSNVQFAVNP +G ++VIEMN
Sbjct: 242  IHTGDSITVAPAQTLTDKEYQIMRNASMAVLREIGVETGGSNVQFAVNPKNGRLIVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT  +TPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGYTLDELMNDITGGRTPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            F FEKF G+   LTTQMKSVGE MA+GRT QES QKALR LE G +G+      +     
Sbjct: 362  FNFEKFAGANDRLTTQMKSVGEVMAIGRTQQESMQKALRGLEVGATGFDPKVSLDDPEAL 421

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
             +++  L+    +R+  I  A + G+ VD +  L+ ID+WFL Q +EL+ +E+ +  Q +
Sbjct: 422  TKIRRELKDAGAERIWYIADAFRAGLSVDGVFNLTNIDRWFLVQIEELVRLEEQVAEQGI 481

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
            + ++ D    +KR+GF+D ++A     +E E+R+ R    + P YKRVDTCAAEF  +T 
Sbjct: 482  NGLSADFLRMLKRKGFADARLAKLAGVSESEIRKLREQYNLHPVYKRVDTCAAEFSTDTA 541

Query: 627  YMYSSYDFECESAPTQ-KKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNS 685
            YMYS+Y+ ECE+ P Q ++K+++LGGGPNRIGQGIEFDYCC H + +L+  GYETIM+N 
Sbjct: 542  YMYSTYEEECEANPKQDREKIMVLGGGPNRIGQGIEFDYCCVHAALALREDGYETIMVNC 601

Query: 686  NPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEH 745
            NPETVSTDYDTSDRLYFEP+T+EDVL ++ +E+P+G+IVQ+GGQTPLKL+          
Sbjct: 602  NPETVSTDYDTSDRLYFEPVTLEDVLEIVRIEKPKGVIVQYGGQTPLKLA---------- 651

Query: 746  RLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEI 805
            R   A+G   V + GTSPD+ID AEDRERF   +  L ++QP      +   A+  AKEI
Sbjct: 652  RALEAAG---VPVIGTSPDAIDRAEDRERFQQAVDRLKLKQPANATVTAIEQAVEKAKEI 708

Query: 806  GYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALA 865
            GYP+VVRPSYVLGGRAMEIVY +  L  Y + AV V  + PVL+D++L DA+E+DVDA+ 
Sbjct: 709  GYPLVVRPSYVLGGRAMEIVYDEADLRRYFQTAVSVSNDAPVLLDRFLDDAVEVDVDAIC 768

Query: 866  DSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMN 925
            D    V+IGGIMEHIEQAGVHSGDSAC +P  T+S    D +     KLA  L V GLMN
Sbjct: 769  DG-EMVLIGGIMEHIEQAGVHSGDSACSLPAYTLSQEIQDVMRQQVQKLAFELQVRGLMN 827

Query: 926  CQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPK 985
             Q+A+  + +VYL+E NPRA+RTVPFVSKA G PLAK AA VM+GK+L++ G TKE+IP 
Sbjct: 828  VQFAVKDN-EVYLIEVNPRAARTVPFVSKATGVPLAKVAARVMAGKTLSEQGVTKEIIPP 886

Query: 986  HVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVF 1045
            + SVKE VLPF KF G D LLGPEMRSTGEVMG+  +F  AFAKAQ+ +   +   G   
Sbjct: 887  YYSVKEVVLPFNKFPGVDPLLGPEMRSTGEVMGVGRTFAEAFAKAQLGSNSTMKKQGRAL 946

Query: 1046 LSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVA 1105
            LS+ +  K  +  +A   L  GF++ +T GTA  L   GI    V K+HEGRPH  D + 
Sbjct: 947  LSVREGDKERVVDLAAKLLKFGFELDATHGTAIVLGEAGINPRLVNKVHEGRPHIQDRIK 1006

Query: 1106 NGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRS 1156
            NG+   ++ T++G    + D   +RR  L YKV   TT++G  A A A+ +
Sbjct: 1007 NGEYTYIINTTAGRQAIE-DSKLIRRSALQYKVHYDTTLNGGFATAMALNA 1056


>gi|62178631|ref|YP_215048.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Choleraesuis str. SC-B67]
 gi|375112937|ref|ZP_09758107.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Choleraesuis str. SCSA50]
 gi|62126264|gb|AAX63967.1| carbamoyl-phosphate synthase, large subunit [Salmonella enterica
            subsp. enterica serovar Choleraesuis str. SC-B67]
 gi|322713083|gb|EFZ04654.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Choleraesuis str. SCSA50]
          Length = 1075

 Score = 1227 bits (3175), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 617/1078 (57%), Positives = 784/1078 (72%), Gaps = 19/1078 (1%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILILGAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  E+V +++EKERPDA+LPTMGGQTALN A+ L   G LE++GV +IGA  DA
Sbjct: 63   ATYIEPIHWEVVRKIIEKERPDAVLPTMGGQTALNCALELERQGVLEEFGVTMIGATADA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  F  AMK IG+ T  SGI +T++E +++A ++G FP IIRP+FT+GGTGGGI
Sbjct: 123  IDKAEDRRRFDIAMKKIGLDTARSGIAHTMEEALAVAADVG-FPCIIRPSFTMGGTGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEFE IC+ GL  S T+++L+++SL+GWKEYE+EV+RD  DN +I+CSIEN D MG
Sbjct: 182  AYNREEFEEICERGLDLSPTNELLIDESLIGWKEYEMEVVRDKNDNCIIVCSIENFDAMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            +HTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGVE GGSNVQFAVNP +G ++VIEMN
Sbjct: 242  IHTGDSITVAPAQTLTDKEYQIMRNASMAVLREIGVETGGSNVQFAVNPKNGRLIVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT  +TPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGYTLDELMNDITGGRTPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            F FEKF G+   LTTQMKSVGE MA+GRT QES QKALR LE G +G+      +     
Sbjct: 362  FNFEKFAGANDRLTTQMKSVGEVMAIGRTQQESLQKALRGLEVGATGFDPKVSLDDPEAL 421

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
             +++  L+    DR+  I  A + G+ VD +  L+ ID+WFL Q +EL+ +E+ +    +
Sbjct: 422  TKIRRELKDAGADRIWYIADAFRAGLSVDGVFNLTNIDRWFLVQIEELVRLEEKVAEVGI 481

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
            + +  D   ++KR+GF+D ++A      E E+R+ R    + P YKRVDTCAAEF  +T 
Sbjct: 482  TGLNADFLRQLKRKGFADARLAKLAGVREAEIRKLRDQYDLHPVYKRVDTCAAEFATDTA 541

Query: 627  YMYSSYDFECESAPT-QKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNS 685
            YMYS+Y+ ECE+ P+  + K+++LGGGPNRIGQGIEFDYCC H S +L+  GYETIM+N 
Sbjct: 542  YMYSTYEDECEANPSVDRDKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVNC 601

Query: 686  NPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEH 745
            NPETVSTDYDTSDRLYFEP+T+EDVL ++ +E+P+G+IVQ+GGQTPLKL+          
Sbjct: 602  NPETVSTDYDTSDRLYFEPVTLEDVLEIVRIEKPKGVIVQYGGQTPLKLA---------- 651

Query: 746  RLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEI 805
            R   A+G   V + GTSPD+ID AEDRERF   +  L ++QP      +   A+  AKEI
Sbjct: 652  RALEAAG---VPVIGTSPDAIDRAEDRERFQHAVDRLKLKQPANATVTAIEQAVEKAKEI 708

Query: 806  GYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALA 865
            GYP+VVRPSYVLGGRAMEIVY +  L  Y + AV V  + PVL+D++L DA+E+DVDA+ 
Sbjct: 709  GYPLVVRPSYVLGGRAMEIVYDEADLCRYFQTAVSVSNDAPVLLDRFLDDAVEVDVDAIC 768

Query: 866  DSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMN 925
            D    V+IGGIMEHIEQAGVHSGDSAC +P  T+S    D +     KLA  L V GLMN
Sbjct: 769  DG-EMVLIGGIMEHIEQAGVHSGDSACSLPAYTLSQEIQDVMRQQVQKLAFELQVRGLMN 827

Query: 926  CQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPK 985
             Q+A+  + +VYL+E NPRA+RTVPFVSKA G PLAK AA VM+GKSL + G T+E+IP 
Sbjct: 828  VQFAVKDN-EVYLIEVNPRAARTVPFVSKATGVPLAKVAARVMAGKSLTEQGVTQEIIPP 886

Query: 986  HVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVF 1045
            + SVKE VLPF KF G D LLGPEMRSTGEVMG+  +F  AFAKAQ+ +   +   G   
Sbjct: 887  YYSVKEVVLPFNKFPGVDPLLGPEMRSTGEVMGVGRTFAEAFAKAQLGSNSTMKKQGRAL 946

Query: 1046 LSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVA 1105
            LS+ +  K  +  +A   L  GF++ +T GTA  L   GI    V K+HEGRPH  D + 
Sbjct: 947  LSVREGDKERVVDLAAKLLKQGFELDATHGTAIVLGEAGINPRLVNKVHEGRPHIQDRIK 1006

Query: 1106 NGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTVT 1163
            NG+   ++ T++G    + D   +RR  L YKV   TT++G  A   A+ +  +  VT
Sbjct: 1007 NGEYTYIINTTAGRRAIE-DSRVIRRSALQYKVHYDTTLNGGFATTMALNADATEKVT 1063


>gi|94969224|ref|YP_591272.1| carbamoyl-phosphate synthase large subunit [Candidatus Koribacter
            versatilis Ellin345]
 gi|166991300|sp|Q1IPK2.1|CARB_ACIBL RecName: Full=Carbamoyl-phosphate synthase large chain; AltName:
            Full=Carbamoyl-phosphate synthetase ammonia chain
 gi|94551274|gb|ABF41198.1| carbamoyl-phosphate synthase large subunit [Candidatus Koribacter
            versatilis Ellin345]
          Length = 1102

 Score = 1227 bits (3175), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 630/1112 (56%), Positives = 799/1112 (71%), Gaps = 58/1112 (5%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            +R D+ KILI+G+GPIVIGQ+ EFDYSG QACKALK EGYEV+L NSNPATIMTDP +AD
Sbjct: 3    RRNDISKILIIGSGPIVIGQSAEFDYSGAQACKALKAEGYEVVLANSNPATIMTDPEMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPD--------ALLPTMGGQTALNLAVALAESGALEKYGVE 199
            RTYI P+TPE +E+++  E           ALLPT+GGQTALNLAV LA+SG L+KY V 
Sbjct: 63   RTYIEPLTPEFLEEIIRIEAAMMPAGAGKFALLPTVGGQTALNLAVDLADSGVLDKYSVI 122

Query: 200  LIGAKLDAIKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFT 259
            LIGA+L AIKKAEDR LFK AM  IG+  P S + N L + +  + +IG FPL++RP+FT
Sbjct: 123  LIGAQLGAIKKAEDRLLFKDAMAKIGLDVPRSALINNLKDGLEFSGKIG-FPLVLRPSFT 181

Query: 260  LGGTGGGIAYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICS 319
            LGG+GGGIAYN+EE   +   GL  S   +VL+E+S+LGWKEYELE+MRDLADNV++ICS
Sbjct: 182  LGGSGGGIAYNREELMDLLGKGLDLSPVHEVLLEESVLGWKEYELELMRDLADNVIVICS 241

Query: 320  IENVDPMGVHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDG 379
            IEN DPMGVHTGDSITVAPAQTL+D+EYQ +RD +I +IREIGVE GGSN+QFA NP +G
Sbjct: 242  IENFDPMGVHTGDSITVAPAQTLSDREYQIMRDAAIKVIREIGVETGGSNIQFATNPENG 301

Query: 380  EVMVIEMNPRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDY 439
             ++VIEMNPRVSRSSALASKATGFPIAK+AA+L+VGY+LD+I NDIT+KTPA FEP++DY
Sbjct: 302  RMIVIEMNPRVSRSSALASKATGFPIAKIAARLAVGYTLDEITNDITRKTPACFEPTLDY 361

Query: 440  VVTKIPRFAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNV 499
            VV KIP++ FEKFPG++  L  QMKSVGEAMA+GRTF+E+  K +RSLE G S      V
Sbjct: 362  VVVKIPKWQFEKFPGADASLGPQMKSVGEAMAIGRTFKEALMKGIRSLETGKS-IASEKV 420

Query: 500  KELDWDWEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQ 559
            +E       +   L   +P+R+Q +  A+  G  V+++H L+ ID WFL Q KE+     
Sbjct: 421  EE-----RIITKRLVTAHPERLQYVRHALLHGWSVEKVHSLTKIDPWFLYQLKEIAQAHA 475

Query: 560  FLLTQSVSNMTKDDFYEVKRRGFSDKQIAFATKS-----TEKEVREKRLSLGVIPSYKRV 614
                 ++  +  D+  ++KR GFSD+++A   K+       + V EKR + G+ P YKRV
Sbjct: 476  HTEQHTMDEVGPDELRDLKRMGFSDERLAHLWKAKNGKGASRLVYEKRHASGIRPVYKRV 535

Query: 615  DTCAAEFEANTPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQ 674
            DTCAAEFE+ TPY+YS+Y+ E E+APT KKKV+ILG GPNRIGQGIEFDYCCCH +F+L+
Sbjct: 536  DTCAAEFESFTPYLYSTYEEEDEAAPTDKKKVIILGSGPNRIGQGIEFDYCCCHAAFALR 595

Query: 675  SAGYETIMMNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLE----RPEGIIVQFGGQT 730
              GYETIM+N NPETVSTDYDTSDRLYFEPLT EDV+ + + E     P G+IVQFGGQT
Sbjct: 596  DDGYETIMVNCNPETVSTDYDTSDRLYFEPLTYEDVMEIYEHEASGGAPIGVIVQFGGQT 655

Query: 731  PLKLSLPIHQYLDEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGG 790
            PL L+LP+           ASG   V + GTSP+SID AEDR+RFN +++EL I QP G 
Sbjct: 656  PLNLALPL----------KASG---VPVIGTSPESIDLAEDRKRFNKLLEELDIPQPPGS 702

Query: 791  IAKSEADALAIAKEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLID 850
             A S  +A+A A +IGYPV+VRPSYVLGGRAM I Y  E +  Y+  AVE   ERPVLID
Sbjct: 703  TATSLEEAVANANKIGYPVLVRPSYVLGGRAMMICYEQEEVERYMRQAVEYSQERPVLID 762

Query: 851  KYLSDAIEIDVDALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSW 910
             +L +A E+DVD L+D   + VIGGIM+HIE+AG+HSGDS+C++P+  +S   L TI  +
Sbjct: 763  HFLEEATEVDVDCLSDG-EDCVIGGIMQHIEEAGIHSGDSSCVLPSVDLSEQVLKTIREY 821

Query: 911  TIKLAKRLNVCGLMNCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSG 970
            T KLA+ L V GLMN QYAI     VY++E NPRASRTVP+VSKA G P+AK AA +M+G
Sbjct: 822  TFKLARALKVIGLMNVQYAIQRE-KVYVIEVNPRASRTVPYVSKATGVPMAKIAARLMTG 880

Query: 971  KSLNDLGFTKEVIPKHVS------------VKEAVLPFEKFQGCDVLLGPEMRSTGEVMG 1018
            + L      +E +P+++             VK  V P+ KF G D +LGPEM+STGEVMG
Sbjct: 881  RKL------REFLPQNIEQGADLATGNCYYVKSPVFPWGKFPGVDTVLGPEMKSTGEVMG 934

Query: 1019 IDMSFPIAFAKAQIAAGQKLPLSGTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAH 1078
            +  +F  AFAKAQ+AAGQKLP  GTVF+SLN   K H   +AK F+D+GFKIV+T GTA 
Sbjct: 935  VADNFGEAFAKAQLAAGQKLPTKGTVFISLNKRDKQHAAALAKKFVDLGFKIVATHGTAD 994

Query: 1079 FLELKGIAVERVLKMHEGRPHAGDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKV 1138
             +E  GI VERV K+ EGRP+  D++   +IQM++ T  G +    D   +RR  +  ++
Sbjct: 995  EMEDGGIEVERVFKVKEGRPNVVDLIKGDRIQMIINTPQG-AEPWFDEKAIRRAAITARI 1053

Query: 1139 PVITTVSGALANAEAIRSLKSNTVTMTALQDF 1170
            P ITT+S A A  E I +L+    T+ ALQ+ 
Sbjct: 1054 PTITTLSAARAAVEGIAALQRGKTTVYALQEL 1085


>gi|332140821|ref|YP_004426559.1| carbamoyl phosphate synthase large subunit [Alteromonas macleodii
            str. 'Deep ecotype']
 gi|327550843|gb|AEA97561.1| carbamoyl phosphate synthase large subunit [Alteromonas macleodii
            str. 'Deep ecotype']
          Length = 1073

 Score = 1227 bits (3175), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 620/1076 (57%), Positives = 780/1076 (72%), Gaps = 18/1076 (1%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILI+GAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIKSILIIGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  E+V +++EKERPDA+LPTMGGQTALN A+ L + G LE++G ELIGA  DA
Sbjct: 63   ATYIEPIHWEVVRKIIEKERPDAILPTMGGQTALNCALELDKHGVLEEFGCELIGATADA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAE+R+ F QAMK IG++ P + I +++DE   + + IG FP IIRP+FT+GGTGGGI
Sbjct: 123  IDKAENRERFDQAMKNIGLECPRAEIAHSMDEAHDVLSRIG-FPCIIRPSFTMGGTGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN +EF  IC  GL  S T+++L+++SLLGWKEYE+EV+RD ADN +I+C+IEN DPMG
Sbjct: 182  AYNIDEFNEICTRGLDLSPTNELLIDESLLGWKEYEMEVVRDKADNCIIVCTIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKE+Q +R+ ++A++REIGVE GGSNVQF V+P  G +++IEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEFQIMRNAAMAVLREIGVETGGSNVQFGVDPKTGRMVIIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKK-TPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT   TPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGYTLDELANDITGGLTPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            F FEKF G+   LTTQMKSVGE MA+GR  QES QKALR LE G SG       E     
Sbjct: 362  FNFEKFAGANDRLTTQMKSVGEVMAIGRNQQESLQKALRGLEVGASGLNPMVDLEDPESR 421

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
             ++ Y LR P  +R+  I  A + GM V+E+  L+ ID+W+L Q ++LI +E  +    +
Sbjct: 422  NKVVYELRQPGAERIWYIGDAFRMGMSVEEVFNLTNIDRWYLVQLEDLILLEAKVAELGL 481

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
              +  D    +KR+GFSD ++A  TK  E ++RE R   G+ P YKRVDTCAAEF  +T 
Sbjct: 482  PGIDADFMRALKRKGFSDARLAELTKVAESDIREARRGFGISPVYKRVDTCAAEFSTSTA 541

Query: 627  YMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSN 686
            YMYS+YD ECE+APT K+K+++LGGGPNRIGQGIEFDYCC H + S++  GYETIM+N N
Sbjct: 542  YMYSTYDEECEAAPTDKEKIMVLGGGPNRIGQGIEFDYCCVHAALSMREDGYETIMVNCN 601

Query: 687  PETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHR 746
            PETVSTDYDTSDRLYFEP+T+EDVL ++  E+P+G+IVQ+GGQTPLKL+          R
Sbjct: 602  PETVSTDYDTSDRLYFEPVTLEDVLEIVAKEQPKGVIVQYGGQTPLKLA----------R 651

Query: 747  LPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEIG 806
               A+G   V + GTSP++ID AEDRERF  ++ +L+++QP      +   AL +A+EIG
Sbjct: 652  ALEAAG---VPVIGTSPEAIDRAEDRERFQQMVNKLNLKQPANATVTNVEQALTMAEEIG 708

Query: 807  YPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALAD 866
            +P+VVRPSYVLGGRAMEIVY  + L  YL  AV+V  + PVL+D++L DAIE+D+DA+ D
Sbjct: 709  FPLVVRPSYVLGGRAMEIVYDIKDLKRYLNEAVKVSNDAPVLLDRFLDDAIEVDIDAICD 768

Query: 867  SCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNC 926
                VVIGGIMEHIEQAGVHSGDSAC +P  ++     D +      +A  L V GLMN 
Sbjct: 769  G-KEVVIGGIMEHIEQAGVHSGDSACSLPPHSLPKDIQDVMREQVKAMALELGVVGLMNT 827

Query: 927  QYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPKH 986
            Q+AI   G+VYL+E NPRA+RTVPFVSKA G PLAK AA  M+G SL + G T+EVIP  
Sbjct: 828  QFAI-KDGEVYLIEVNPRAARTVPFVSKATGIPLAKVAARAMAGVSLAEQGVTEEVIPPF 886

Query: 987  VSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVFL 1046
             SVKE VLPF KFQG D LLGPEMRSTGEVMG+  +F  A+AKA + AG  LP  G   +
Sbjct: 887  YSVKEVVLPFAKFQGVDPLLGPEMRSTGEVMGVGDTFEEAYAKANLGAGAPLPKEGKALI 946

Query: 1047 SLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVAN 1106
            S+ +  KP +  +AKA +  GF I +T GTA  L   GI    V K+ EGRP+  D + N
Sbjct: 947  SVRETDKPKIIELAKALVAAGFSIEATRGTATTLYDAGIMSTVVNKLSEGRPNIVDAIKN 1006

Query: 1107 GQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTV 1162
            G+   ++ T+ G      D + +RR  L  KV   TT++ A A   A  +   N V
Sbjct: 1007 GEYAYLINTTEGRQA-ITDSVYIRREALVNKVTYTTTMNAAFATIRAKSADDRNKV 1061


>gi|418855274|ref|ZP_13409932.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Newport str. CVM 19593]
 gi|392821954|gb|EJA77774.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Newport str. CVM 19593]
          Length = 1075

 Score = 1227 bits (3175), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 617/1078 (57%), Positives = 784/1078 (72%), Gaps = 19/1078 (1%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILILGAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  E+V +++EKERPDA+LPTMGGQTALN A+ L   G LE++GV +IGA  DA
Sbjct: 63   ATYIEPIHWEVVRKIIEKERPDAVLPTMGGQTALNCALELERQGVLEEFGVTMIGATADA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  F  AMK IG+ T  SGI +T++E +++A ++G FP IIRP+FT+GGTGGGI
Sbjct: 123  IDKAEDRRRFDIAMKKIGLDTARSGIAHTMEEALAVAADVG-FPCIIRPSFTMGGTGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEFE IC+ GL  S T+++L+++SL+GWKEYE+EV+RD  DN +I+CSIEN D MG
Sbjct: 182  AYNREEFEEICERGLDLSPTNELLIDESLIGWKEYEMEVVRDKNDNCIIVCSIENFDAMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            +HTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGVE GGSNVQFAVNP +G ++VIEMN
Sbjct: 242  IHTGDSITVAPAQTLTDKEYQIMRNASMAVLREIGVETGGSNVQFAVNPKNGRLIVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT  +TPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGYTLDELMNDITGGRTPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            F FEKF G+   LTTQMKSVGE MA+GRT QES QKALR LE G +G+      +     
Sbjct: 362  FNFEKFAGANDRLTTQMKSVGEVMAIGRTQQESLQKALRGLEVGATGFDPKVSLDDPEAL 421

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
             +++  L+    DR+  I  A + G+ VD +  L+ ID+WFL Q +EL+ +E+ +    +
Sbjct: 422  TKIRRELKDAGADRIWYIADAFRAGLSVDGVFNLTNIDRWFLVQIEELVRLEEKVAEVGI 481

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
            + +  D   ++KR+GF+D ++A      E E+R+ R    + P YKRVDTCAAEF  +T 
Sbjct: 482  TGLNADFLLQLKRKGFADARLAKLAGVREAEIRKLRDQYDLHPVYKRVDTCAAEFATDTA 541

Query: 627  YMYSSYDFECESAPT-QKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNS 685
            YMYS+Y+ ECE+ P+  + K+++LGGGPNRIGQGIEFDYCC H S +L+  GYETIM+N 
Sbjct: 542  YMYSTYEDECEANPSVDRDKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVNC 601

Query: 686  NPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEH 745
            NPETVSTDYDTSDRLYFEP+T+EDVL ++ +E+P+G+IVQ+GGQTPLKL+          
Sbjct: 602  NPETVSTDYDTSDRLYFEPVTLEDVLEIVRIEKPKGVIVQYGGQTPLKLA---------- 651

Query: 746  RLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEI 805
            R   A+G   V + GTSPD+ID AEDRERF   +  L ++QP      +   A+  AKEI
Sbjct: 652  RALEAAG---VPVIGTSPDAIDRAEDRERFQHAVDRLKLKQPANATVTAIEQAVEKAKEI 708

Query: 806  GYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALA 865
            GYP+VVRPSYVLGGRAMEIVY +  L  Y + AV V  + PVL+D++L DA+E+DVDA+ 
Sbjct: 709  GYPLVVRPSYVLGGRAMEIVYDEADLRRYFQTAVSVSNDAPVLLDRFLDDAVEVDVDAIC 768

Query: 866  DSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMN 925
            D    V+IGGIMEHIEQAGVHSGDSAC +P  T+S    D +     KLA  L V GLMN
Sbjct: 769  DG-EMVLIGGIMEHIEQAGVHSGDSACSLPAYTLSQEIQDVMRQQVQKLAFELQVRGLMN 827

Query: 926  CQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPK 985
             Q+A+  + +VYL+E NPRA+RTVPFVSKA G PLAK AA VM+GKSL + G T+E+IP 
Sbjct: 828  VQFAVKDN-EVYLIEVNPRAARTVPFVSKATGVPLAKVAARVMAGKSLTEQGVTQEIIPP 886

Query: 986  HVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVF 1045
            + SVKE VLPF KF G D LLGPEMRSTGEVMG+  +F  AFAKAQ+ +   +   G   
Sbjct: 887  YYSVKEVVLPFNKFPGVDPLLGPEMRSTGEVMGVGRTFAEAFAKAQLGSNSTMKKQGRAL 946

Query: 1046 LSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVA 1105
            LS+ +  K  +  +A   L  GF++ +T GTA  L   GI    V K+HEGRPH  D + 
Sbjct: 947  LSVREGDKERVVDLAAKLLKQGFELDATHGTAIVLGEAGINPRLVNKVHEGRPHIQDRIK 1006

Query: 1106 NGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTVT 1163
            NG+   ++ T++G    + D   +RR  L YKV   TT++G  A   A+ +  +  VT
Sbjct: 1007 NGEYTYIINTTAGRRAIE-DSRVIRRSALQYKVHYDTTLNGGFATTMALNADATEKVT 1063


>gi|334705416|ref|ZP_08521282.1| carbamoyl phosphate synthase large subunit [Aeromonas caviae Ae398]
          Length = 1074

 Score = 1227 bits (3174), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 607/1068 (56%), Positives = 781/1068 (73%), Gaps = 18/1068 (1%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KR DL+ ILILGAGPIVIGQACEFDYSG QACKALKEEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRNDLQSILILGAGPIVIGQACEFDYSGAQACKALKEEGYRVILVNSNPATIMTDPEMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+T E+V ++++KERPDA+LPTMGGQTALN A+AL + G L+++GVE+IGA  DA
Sbjct: 63   ATYIEPITWEVVREIIKKERPDAILPTMGGQTALNCALALEQHGVLKEFGVEMIGATADA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  F +AM++IG++ P +GI + ++E   +   +G FP IIRP+FT+GG+GGGI
Sbjct: 123  IDKAEDRSRFDKAMRSIGLECPRAGIAHNMEEAWGVQQMVG-FPCIIRPSFTMGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN EEF  IC+ GL  S T ++L+++SL+GWKEYE+EV+RD  DN +I+C+IEN DPMG
Sbjct: 182  AYNTEEFVEICERGLDLSPTKELLIDESLIGWKEYEMEVVRDRNDNCIIVCAIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            +HTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGVE GGSNVQF +NP DG +++IEMN
Sbjct: 242  IHTGDSITVAPAQTLTDKEYQIMRNASMAVLREIGVETGGSNVQFGINPKDGRMVIIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL++GY+LD++ NDIT  +TPASFEP+IDYVVTK+PR
Sbjct: 302  PRVSRSSALASKATGFPIAKIAAKLAIGYTLDELMNDITGGRTPASFEPAIDYVVTKVPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            F FEKF G+   LTTQMKSVGE MA+GR FQES  KALR LE G +G+            
Sbjct: 362  FNFEKFAGANDRLTTQMKSVGEVMAIGRNFQESLHKALRGLETGKTGFDPMVDLNAPDSL 421

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
             ++++ L+    +R+  I  A + G+ +D + +L+ ID WFL Q +EL+ +E+ +  + +
Sbjct: 422  TRIRHELQDAGAERIFYIADAFRAGLSMDGVFKLTKIDPWFLVQIEELVKLEEQVKERGM 481

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
            + +  D    +KR+GF+D ++A      E EVR+ R    + P YKRVDTCAAEF  NT 
Sbjct: 482  AGLDADFLRALKRKGFADARLAKILGVAEGEVRKLRARHNIFPVYKRVDTCAAEFATNTA 541

Query: 627  YMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSN 686
            YMYSSYD ECE+ PT + K++++GGGPNRIGQGIEFDYCC H + +L+  GYETIM+N N
Sbjct: 542  YMYSSYDEECEANPTNRDKIMVIGGGPNRIGQGIEFDYCCVHAALALREDGYETIMVNCN 601

Query: 687  PETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHR 746
            PETVSTDYDTSDRLYFEP+T+EDVL ++ +E+P+G+IVQ+GGQTPLKL+          R
Sbjct: 602  PETVSTDYDTSDRLYFEPVTLEDVLEIVRVEQPKGVIVQYGGQTPLKLA----------R 651

Query: 747  LPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEIG 806
               A+G   V + GTSPD+ID AEDRERF + ++ L ++QP+ G   +   A+ +A  I 
Sbjct: 652  ALEANG---VPVIGTSPDAIDRAEDRERFQSAVERLGLKQPENGTVTALEQAVQLATRIT 708

Query: 807  YPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALAD 866
            YP+VVRPSYVLGGRAMEIVY ++ L  Y   AV V  E PVL+D++L DA E+DVDA+ D
Sbjct: 709  YPLVVRPSYVLGGRAMEIVYDEQDLRRYFAEAVSVSNESPVLLDRFLDDATEVDVDAICD 768

Query: 867  SCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNC 926
               +VVIGGIMEHIEQAG+HSGDSAC +P  T+S +  D +     KLA  L V GLMN 
Sbjct: 769  GV-DVVIGGIMEHIEQAGIHSGDSACSLPPYTLSKAIQDEMREQVRKLALELGVVGLMNV 827

Query: 927  QYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPKH 986
            Q+A+  + ++YL+E NPRA+RTVPFVSKA G PLAK AA VM+G+SL + GFT E+IP +
Sbjct: 828  QFAVKDN-EIYLIEVNPRAARTVPFVSKATGAPLAKIAARVMAGQSLKEQGFTTEIIPPY 886

Query: 987  VSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVFL 1046
             SVKE VLPF KF G D LLGPEMRSTGEVMG+  SF  A+AKAQ+ AG ++P  G   L
Sbjct: 887  YSVKEVVLPFAKFPGVDPLLGPEMRSTGEVMGVGSSFAEAYAKAQLGAGHQVPSEGRALL 946

Query: 1047 SLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVAN 1106
            S+    K  +  +A   L++G+ + +T GTA  L    I    V K+HEGRPH  D + N
Sbjct: 947  SVRHGDKERVVNLAAKLLELGYDLDATHGTAVTLGEASINPRLVNKVHEGRPHILDRIKN 1006

Query: 1107 GQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAI 1154
            G+   +V T+ G    + D  +LRR  L +KV   TT+  A A   AI
Sbjct: 1007 GEYTYIVNTAEGRQAIE-DSKQLRRGALQHKVAYTTTLHAAFATCMAI 1053


>gi|16759060|ref|NP_454677.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Typhi str. CT18]
 gi|29140610|ref|NP_803952.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Typhi str. Ty2]
 gi|213163014|ref|ZP_03348724.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Typhi str. E00-7866]
 gi|289826208|ref|ZP_06545320.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Typhi str. E98-3139]
 gi|378958205|ref|YP_005215691.1| carbamoyl-phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Typhi str. P-stx-12]
 gi|22095513|sp|Q8Z9L7.3|CARB_SALTI RecName: Full=Carbamoyl-phosphate synthase large chain; AltName:
            Full=Carbamoyl-phosphate synthetase ammonia chain
 gi|25293883|pir||AE0510 carbamoyl-phosphate synthase large chain [imported] - Salmonella
            enterica subsp. enterica serovar Typhi (strain CT18)
 gi|16501350|emb|CAD01221.1| carbamoyl-phosphate synthase large chain [Salmonella enterica subsp.
            enterica serovar Typhi]
 gi|29136234|gb|AAO67801.1| carbamoyl-phosphate synthase large chain [Salmonella enterica subsp.
            enterica serovar Typhi str. Ty2]
 gi|374352077|gb|AEZ43838.1| Carbamoyl-phosphate synthase large chain [Salmonella enterica subsp.
            enterica serovar Typhi str. P-stx-12]
          Length = 1075

 Score = 1227 bits (3174), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 617/1078 (57%), Positives = 784/1078 (72%), Gaps = 19/1078 (1%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILILGAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  E+V +++EKERPDA+LPTMGGQTALN A+ L   G LE++GV +IGA  DA
Sbjct: 63   ATYIEPIHWEVVRKIIEKERPDAVLPTMGGQTALNCALELERQGVLEEFGVTMIGATADA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  F  AMK IG+ T  SGI +T++E +++A ++G FP IIRP+FT+GGTGGGI
Sbjct: 123  IDKAEDRRRFDIAMKKIGLDTARSGIAHTMEEALAVAADVG-FPCIIRPSFTMGGTGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEFE IC+ GL  S T+++L+++SL+GWKEYE+EV+RD  DN +I+CSIEN D MG
Sbjct: 182  AYNREEFEEICERGLDLSPTNELLIDESLIGWKEYEMEVVRDKNDNCIIVCSIENFDAMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            +HTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGVE GGSNVQFAVNP +G ++VIEMN
Sbjct: 242  IHTGDSITVAPAQTLTDKEYQIMRNASMAVLREIGVETGGSNVQFAVNPKNGRLIVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT  +TPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGYTLDELMNDITGGRTPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            F FEKF G+   LTTQMKSVGE MA+GRT QES QKALR LE G +G+      +     
Sbjct: 362  FNFEKFAGANDRLTTQMKSVGEVMAIGRTQQESLQKALRGLEVGATGFDPKVSLDDPEAL 421

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
             +++  L+    DR+  I  A + G+ VD +  L+ ID+WFL Q +EL+ +E+ +    +
Sbjct: 422  TKIRRELKDAGADRIWYIADAFRAGLSVDGVFNLTNIDRWFLVQIEELVRLEEKVTEVGI 481

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
            + +  D   ++KR+GF+D ++A      E E+R+ R    + P YKRVDTCAAEF  +T 
Sbjct: 482  TGLNADFLRQLKRKGFADARLAKLAGVREGEIRKLRDQYDLHPVYKRVDTCAAEFATDTA 541

Query: 627  YMYSSYDFECESAPT-QKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNS 685
            YMYS+Y+ ECE+ P+  + K+++LGGGPNRIGQGIEFDYCC H S +L+  GYETIM+N 
Sbjct: 542  YMYSTYEDECEANPSVDRDKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVNC 601

Query: 686  NPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEH 745
            NPETVSTDYDTSDRLYFEP+T+EDVL ++ +E+P+G+IVQ+GGQTPLKL+          
Sbjct: 602  NPETVSTDYDTSDRLYFEPVTLEDVLEIVRIEKPKGVIVQYGGQTPLKLA---------- 651

Query: 746  RLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEI 805
            R   A+G   V + GTSPD+ID AEDRERF   +  L ++QP      +   A+  AKEI
Sbjct: 652  RALEAAG---VPVIGTSPDAIDRAEDRERFQHAVDRLKLKQPANATVTAIEQAVEKAKEI 708

Query: 806  GYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALA 865
            GYP+VVRPSYVLGGRAMEIVY +  L  Y + AV V  + PVL+D++L DA+E+DVDA+ 
Sbjct: 709  GYPLVVRPSYVLGGRAMEIVYDEADLRRYFQTAVSVSNDAPVLLDRFLDDAVEVDVDAIC 768

Query: 866  DSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMN 925
            D    V+IGGIMEHIEQAGVHSGDSAC +P  T+S    D +     KLA  L V GLMN
Sbjct: 769  DG-EMVLIGGIMEHIEQAGVHSGDSACSLPAYTLSQEIQDVMRQQVQKLAFELQVRGLMN 827

Query: 926  CQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPK 985
             Q+A+  + +VYL+E NPRA+RTVPFVSKA G PLAK AA VM+GKSL + G T+E+IP 
Sbjct: 828  VQFAVKDN-EVYLIEVNPRAARTVPFVSKATGVPLAKVAARVMAGKSLTEQGVTQEIIPP 886

Query: 986  HVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVF 1045
            + SVKE VLPF KF G D LLGPEMRSTGEVMG+  +F  AFAKAQ+ +   +   G   
Sbjct: 887  YYSVKEVVLPFNKFPGVDPLLGPEMRSTGEVMGVGRTFAEAFAKAQLGSNSTMKKQGRAL 946

Query: 1046 LSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVA 1105
            LS+ +  K  +  +A   L  GF++ +T GTA  L   GI    V K+HEGRPH  D + 
Sbjct: 947  LSVREGDKERVVDLAAKLLKQGFELDATHGTAIVLGEAGINPRLVNKVHEGRPHIQDRIK 1006

Query: 1106 NGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTVT 1163
            NG+   ++ T++G    + D   +RR  L YKV   TT++G  A   A+ +  +  VT
Sbjct: 1007 NGEYTYIINTTAGRRAIE-DSRVIRRSALQYKVHYDTTLNGGFATTMALNADATEKVT 1063


>gi|56412339|ref|YP_149414.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Paratyphi A str. ATCC 9150]
 gi|197361276|ref|YP_002140911.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Paratyphi A str. AKU_12601]
 gi|56126596|gb|AAV76102.1| carbamoyl-phosphate synthase large chain [Salmonella enterica subsp.
            enterica serovar Paratyphi A str. ATCC 9150]
 gi|197092751|emb|CAR58175.1| carbamoyl-phosphate synthase large chain [Salmonella enterica subsp.
            enterica serovar Paratyphi A str. AKU_12601]
          Length = 1075

 Score = 1227 bits (3174), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 617/1078 (57%), Positives = 784/1078 (72%), Gaps = 19/1078 (1%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILILGAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  E+V +++EKERPDA+LPTMGGQTALN A+ L   G LE++GV +IGA  DA
Sbjct: 63   ATYIEPIHWEVVRKIIEKERPDAVLPTMGGQTALNCALELERQGVLEEFGVTMIGATADA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  F  AMK IG+ T  SGI +T++E +++A ++G FP IIRP+FT+GGTGGGI
Sbjct: 123  IDKAEDRRRFDIAMKKIGLDTARSGIAHTMEEALAVAADVG-FPCIIRPSFTMGGTGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEFE IC+ GL  S T+++L+++SL+GWKEYE+EV+RD  DN +I+CSIEN D MG
Sbjct: 182  AYNREEFEEICERGLDLSPTNELLIDESLIGWKEYEMEVVRDKNDNCIIVCSIENFDAMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            +HTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGVE GGSNVQFAVNP +G ++VIEMN
Sbjct: 242  IHTGDSITVAPAQTLTDKEYQIMRNASMAVLREIGVETGGSNVQFAVNPKNGRLIVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT  +TPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGYTLDELMNDITGGRTPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            F FEKF G+   LTTQMKSVGE MA+GRT QES QKALR LE G +G+      +     
Sbjct: 362  FNFEKFAGANDRLTTQMKSVGEVMAIGRTQQESLQKALRGLEVGATGFDPKVSLDDPEAL 421

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
             +++  L+    DR+  I  A + G+ VD +  L+ ID+WFL Q +EL+ +E+ +    +
Sbjct: 422  TKIRRELKDAGADRIWYIADAFRAGLSVDGVFNLTNIDRWFLVQIEELVRLEEKVAEVGI 481

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
            + +  D   ++KR+GF+D ++A      E E+R+ R    + P YKRVDTCAAEF  +T 
Sbjct: 482  TGLNADFLRQLKRKGFADARLAKLAGVREAEIRKLRDQYDLHPVYKRVDTCAAEFATDTA 541

Query: 627  YMYSSYDFECESAPT-QKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNS 685
            YMYS+Y+ ECE+ P+  + K+++LGGGPNRIGQGIEFDYCC H S +L+  GYETIM+N 
Sbjct: 542  YMYSTYEDECEANPSVDRGKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVNC 601

Query: 686  NPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEH 745
            NPETVSTDYDTSDRLYFEP+T+EDVL ++ +E+P+G+IVQ+GGQTPLKL+          
Sbjct: 602  NPETVSTDYDTSDRLYFEPVTLEDVLEIVRIEKPKGVIVQYGGQTPLKLA---------- 651

Query: 746  RLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEI 805
            R   A+G   V + GTSPD+ID AEDRERF   +  L ++QP      +   A+  AKEI
Sbjct: 652  RALEAAG---VPVIGTSPDAIDRAEDRERFQHAVDRLKLKQPANATVTAIEQAVEKAKEI 708

Query: 806  GYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALA 865
            GYP+VVRPSYVLGGRAMEIVY +  L  Y + AV V  + PVL+D++L DA+E+DVDA+ 
Sbjct: 709  GYPLVVRPSYVLGGRAMEIVYDEADLRRYFQTAVSVSNDAPVLLDRFLDDAVEVDVDAIC 768

Query: 866  DSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMN 925
            D    V+IGGIMEHIEQAGVHSGDSAC +P  T+S    D +     KLA  L V GLMN
Sbjct: 769  DG-EMVLIGGIMEHIEQAGVHSGDSACSLPAYTLSQEIQDVMRQQVQKLAFELQVRGLMN 827

Query: 926  CQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPK 985
             Q+A+  + +VYL+E NPRA+RTVPFVSKA G PLAK AA VM+GKSL + G T+E+IP 
Sbjct: 828  VQFAVKDN-EVYLIEVNPRAARTVPFVSKATGVPLAKVAARVMAGKSLTEQGVTQEIIPP 886

Query: 986  HVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVF 1045
            + SVKE VLPF KF G D LLGPEMRSTGEVMG+  +F  AFAKAQ+ +   +   G   
Sbjct: 887  YYSVKEVVLPFNKFPGVDPLLGPEMRSTGEVMGVGRTFAEAFAKAQLGSNSTMKKQGRAL 946

Query: 1046 LSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVA 1105
            LS+ +  K  +  +A   L  GF++ +T GTA  L   GI    V K+HEGRPH  D + 
Sbjct: 947  LSVREGDKERVVDLAAKLLKQGFELDATHGTAIVLGEAGINPRLVNKVHEGRPHIQDRIK 1006

Query: 1106 NGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTVT 1163
            NG+   ++ T++G    + D   +RR  L YKV   TT++G  A   A+ +  +  VT
Sbjct: 1007 NGEYTYIINTTAGRRAIE-DSRVIRRSALQYKVHYDTTLNGGFATTMALNADATEKVT 1063


>gi|432879294|ref|ZP_20096321.1| carbamoyl-phosphate synthase large chain [Escherichia coli KTE154]
 gi|431415092|gb|ELG97642.1| carbamoyl-phosphate synthase large chain [Escherichia coli KTE154]
          Length = 1073

 Score = 1227 bits (3174), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 619/1071 (57%), Positives = 781/1071 (72%), Gaps = 19/1071 (1%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILILGAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  E+V +++EKERPDA+LPTMGGQTALN A+ L   G LE++GV +IGA  DA
Sbjct: 63   ATYIEPIHWEVVRKIIEKERPDAVLPTMGGQTALNCALELERQGVLEEFGVTMIGATADA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  F  AMK IG++T  SGI +T++E +++A ++G FP IIRP+FT+GG+GGGI
Sbjct: 123  IDKAEDRRRFDVAMKKIGLETARSGIAHTMEEALAVAADVG-FPCIIRPSFTMGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEFE IC  GL  S T ++L+++SL+GWKEYE+EV+RD  DN +I+CSIEN D MG
Sbjct: 182  AYNREEFEEICARGLDLSPTKELLIDESLIGWKEYEMEVVRDKNDNCIIVCSIENFDAMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            +HTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGVE GGSNVQFAVNP +G ++VIEMN
Sbjct: 242  IHTGDSITVAPAQTLTDKEYQIMRNASMAVLREIGVETGGSNVQFAVNPKNGRLIVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT  +TPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGYTLDELMNDITGGRTPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            F FEKF G+   LTTQMKSVGE MA+GRT QES QKALR LE G +G+      +     
Sbjct: 362  FNFEKFAGANDRLTTQMKSVGEVMAIGRTQQESLQKALRGLEVGATGFDPKVSLDDPEAL 421

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
             +++  L+    DR+  I  A + G+ VD +  L+ ID+WFL Q +EL+ +E+ +    +
Sbjct: 422  TKIRRELKDAGADRIWYIADAFRAGLSVDGVFNLTNIDRWFLVQIEELVRLEEKVAEVGI 481

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
            + +  +   ++KR+GF+D ++A      E E+R+ R    + P YKRVDTCAAEF  +T 
Sbjct: 482  TGLNAEFLRQLKRKGFADARLAKLAGVREAEIRKLRDQYDLHPVYKRVDTCAAEFATDTA 541

Query: 627  YMYSSYDFECESAP-TQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNS 685
            YMYS+Y+ ECE+ P T ++K+++LGGGPNRIGQGIEFDYCC H S +L+  GYETIM+N 
Sbjct: 542  YMYSTYEEECEANPSTDREKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVNC 601

Query: 686  NPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEH 745
            NPETVSTDYDTSDRLYFEP+T+EDVL ++ +ERP+G+IVQ+GGQTPLKL+          
Sbjct: 602  NPETVSTDYDTSDRLYFEPVTLEDVLEIVRIERPKGVIVQYGGQTPLKLA---------- 651

Query: 746  RLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEI 805
            R   A+G   V + GTSPD+ID AEDRERF   +  L ++QP      +   A+  AKEI
Sbjct: 652  RALEAAG---VPVIGTSPDAIDRAEDRERFQHAVDRLKLKQPANATVTAIEMAVEKAKEI 708

Query: 806  GYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALA 865
            GYP+VVRPSYVLGGRAMEIVY +  L  Y + AV V  + PVL+D +L DA+E+DVDA+ 
Sbjct: 709  GYPLVVRPSYVLGGRAMEIVYDEADLRRYFQTAVSVSNDAPVLLDHFLDDAVEVDVDAIC 768

Query: 866  DSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMN 925
            D    V+IGGIMEHIEQAGVHSGDSAC +P  T+S    D +     KLA  L V GLMN
Sbjct: 769  DG-EMVLIGGIMEHIEQAGVHSGDSACSLPAYTLSQEIQDVMRQQVQKLAFELQVRGLMN 827

Query: 926  CQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPK 985
             Q+A+  + +VYL+E NPRA+RTVPFVSKA G PLAK AA VM+GKSL + G TKEVIP 
Sbjct: 828  VQFAVKNN-EVYLIEVNPRAARTVPFVSKATGVPLAKVAARVMAGKSLAEQGVTKEVIPP 886

Query: 986  HVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVF 1045
            + SVKE VLPF KF G D LLGPEMRSTGEVMG+  +F  AFAKAQ+ +   +   G   
Sbjct: 887  YYSVKEVVLPFNKFPGVDPLLGPEMRSTGEVMGVGRTFAEAFAKAQLGSNSTMKKHGRAL 946

Query: 1046 LSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVA 1105
            LS+ +  K  +  +A   L  GF++ +T GTA  L   GI    V K+HEGRPH  D + 
Sbjct: 947  LSVREGDKERVVDLAAKLLKQGFELDATHGTAIVLGEAGINPRLVNKVHEGRPHIQDRIK 1006

Query: 1106 NGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRS 1156
            NG+   ++ T+SG    + D   +RR  L YKV   TT++G  A A A+ +
Sbjct: 1007 NGEYTYIINTTSGRRAIE-DSRVIRRSALQYKVHYDTTLNGGFATAMALNA 1056


>gi|224581907|ref|YP_002635705.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Paratyphi C strain RKS4594]
 gi|224466434|gb|ACN44264.1| carbamoyl-phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Paratyphi C strain RKS4594]
          Length = 1075

 Score = 1227 bits (3174), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 617/1078 (57%), Positives = 784/1078 (72%), Gaps = 19/1078 (1%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILILGAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  E+V +++EKERPDA+LPTMGGQTALN A+ L   G LE++GV +IGA  DA
Sbjct: 63   ATYIEPIHWEVVRKIIEKERPDAVLPTMGGQTALNCALELERQGVLEEFGVTMIGATADA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  F  AMK IG+ T  SGI +T++E +++A ++G FP IIRP+FT+GGTGGGI
Sbjct: 123  IDKAEDRRRFDIAMKKIGLDTARSGIAHTMEEALAVAADVG-FPCIIRPSFTMGGTGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEFE IC+ GL  S T+++L+++SL+GWKEYE+EV+RD  DN +I+CSIEN D MG
Sbjct: 182  AYNREEFEEICERGLDLSPTNELLIDESLIGWKEYEMEVVRDKNDNCIIVCSIENFDAMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            +HTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGVE GGSNVQFAVNP +G ++VIEMN
Sbjct: 242  IHTGDSITVAPAQTLTDKEYQIMRNASMAVLREIGVETGGSNVQFAVNPKNGRLIVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT  +TPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGYTLDELMNDITGGRTPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            F FEKF G+   LTTQMKSVGE MA+GRT QES QKALR LE G +G+      +     
Sbjct: 362  FNFEKFAGANDRLTTQMKSVGEVMAIGRTQQESLQKALRGLEVGATGFDPKVSLDDPEAL 421

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
             +++  L+    DR+  I  A + G+ VD +  L+ ID+WFL Q +EL+ +E+ +    +
Sbjct: 422  TKIRRELKDAGADRIWYIADAFRAGLSVDGVFNLTNIDRWFLVQIEELVRLEEKVAEVGI 481

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
            + +  D   ++KR+GF+D ++A      E E+R+ R    + P YKRVDTCAAEF  +T 
Sbjct: 482  TGLNADFLRQLKRKGFADARLAKLAGIREAEIRKLRDQYDLHPVYKRVDTCAAEFATDTA 541

Query: 627  YMYSSYDFECESAPT-QKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNS 685
            YMYS+Y+ ECE+ P+  + K+++LGGGPNRIGQGIEFDYCC H S +L+  GYETIM+N 
Sbjct: 542  YMYSTYEDECEANPSVDRDKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVNC 601

Query: 686  NPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEH 745
            NPETVSTDYDTSDRLYFEP+T+EDVL ++ +E+P+G+IVQ+GGQTPLKL+          
Sbjct: 602  NPETVSTDYDTSDRLYFEPVTLEDVLEIVRIEKPKGVIVQYGGQTPLKLA---------- 651

Query: 746  RLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEI 805
            R   A+G   V + GTSPD+ID AEDRERF   +  L ++QP      +   A+  AKEI
Sbjct: 652  RALEAAG---VPVIGTSPDAIDRAEDRERFQHAVDRLKLKQPANATVTAIEQAVEKAKEI 708

Query: 806  GYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALA 865
            GYP+VVRPSYVLGGRAMEIVY +  L  Y + AV V  + PVL+D++L DA+E+DVDA+ 
Sbjct: 709  GYPLVVRPSYVLGGRAMEIVYDEADLRRYFQTAVSVSNDAPVLLDRFLDDAVEVDVDAIC 768

Query: 866  DSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMN 925
            D    V+IGGIMEHIEQAGVHSGDSAC +P  T+S    D +     KLA  L V GLMN
Sbjct: 769  DG-EMVLIGGIMEHIEQAGVHSGDSACSLPAYTLSQEIQDVMRQQVQKLAFELQVRGLMN 827

Query: 926  CQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPK 985
             Q+A+  + +VYL+E NPRA+RTVPFVSKA G PLAK AA VM+GKSL + G T+E+IP 
Sbjct: 828  VQFAVKDN-EVYLIEVNPRAARTVPFVSKATGVPLAKVAARVMAGKSLTEQGVTQEIIPP 886

Query: 986  HVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVF 1045
            + SVKE VLPF KF G D LLGPEMRSTGEVMG+  +F  AFAKAQ+ +   +   G   
Sbjct: 887  YYSVKEVVLPFNKFPGVDPLLGPEMRSTGEVMGVGRTFAEAFAKAQLGSNSTMKKQGRAL 946

Query: 1046 LSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVA 1105
            LS+ +  K  +  +A   L  GF++ +T GTA  L   GI    V K+HEGRPH  D + 
Sbjct: 947  LSVREGDKERVVDLAAKLLKQGFELDATHGTAIVLGEAGINPRLVNKVHEGRPHIQDRIK 1006

Query: 1106 NGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTVT 1163
            NG+   ++ T++G    + D   +RR  L YKV   TT++G  A   A+ +  +  VT
Sbjct: 1007 NGEYTYIINTTAGRRAIE-DSRVIRRSALQYKVHYDTTLNGGFATTMALNADATEKVT 1063


>gi|328542879|ref|YP_004302988.1| carbamoyl-phosphate synthase large subunit [Polymorphum gilvum
            SL003B-26A1]
 gi|326412625|gb|ADZ69688.1| Carbamoyl-phosphate synthase large subunit [Polymorphum gilvum
            SL003B-26A1]
          Length = 1120

 Score = 1227 bits (3174), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 630/1136 (55%), Positives = 800/1136 (70%), Gaps = 71/1136 (6%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD+  ILI+GAGPIVIGQACEFDYSGTQACKAL+EEGY +IL+NSNPATIMTDP LAD
Sbjct: 3    KRTDISSILIIGAGPIVIGQACEFDYSGTQACKALREEGYRIILVNSNPATIMTDPELAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+TPE+V +++EKERPDALLPTMGGQTALN A+ L   G L K+GVE+IGA+ D 
Sbjct: 63   ATYIEPITPEIVAKIIEKERPDALLPTMGGQTALNCALDLEREGVLAKFGVEMIGARADV 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNT------------------LDECISIANEIGE 249
            I+KAEDR+ F+ AM  IG++ P + I ++                    E +   +EIG 
Sbjct: 123  IEKAEDREKFRAAMDAIGLENPRAAIASSPAIRDENGKIVGYDRNAGFMEALKALDEIG- 181

Query: 250  FPLIIRPAFTLGGTGGGIAYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRD 309
             P IIRPAFTLGGTGGG+AYN+EEFE I ++G+ AS   QVL+++SLLGWKEYE+EV+RD
Sbjct: 182  LPAIIRPAFTLGGTGGGVAYNREEFETIARSGIDASPVGQVLIDESLLGWKEYEMEVVRD 241

Query: 310  LADNVVIICSIENVDPMGVHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSN 369
             ADN +IICSIENVDPMGVHTGDSITVAPA TLTDKEYQ +RD SIA++REIGVE GGSN
Sbjct: 242  KADNCIIICSIENVDPMGVHTGDSITVAPALTLTDKEYQIMRDASIAVLREIGVETGGSN 301

Query: 370  VQFAVNPVDGEVMVIEMNPRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KK 428
            VQFAV+P  G ++VIEMNPRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT   
Sbjct: 302  VQFAVDPESGRLVVIEMNPRVSRSSALASKATGFPIAKIAAKLAVGYTLDELENDITGGA 361

Query: 429  TPASFEPSIDYVVTKIPRFAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLE 488
            TPASFEPSIDYVVTKIPRFAFEKFPGSEP+LTT MKSVGE MA+GRTF ES QKALR LE
Sbjct: 362  TPASFEPSIDYVVTKIPRFAFEKFPGSEPVLTTAMKSVGEVMAIGRTFAESLQKALRGLE 421

Query: 489  CGFSGWGCSNVKELDW--DWEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKW 546
             G +G    ++  L    D   ++ ++  P P R+  +  A++ G  VD++H+L  ID W
Sbjct: 422  TGLTGLDEVDIPGLGQGDDKNAIRAAISTPTPTRLLNVAQAIRLGTPVDQVHQLCGIDPW 481

Query: 547  FLTQFKELIDVEQFLLTQSVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLG 606
            FL Q + ++++E  + TQ +          +K  GFSD ++A      E+++ ++R  LG
Sbjct: 482  FLEQIRHIVEMEARIRTQGLPG-NAPMLRRLKGMGFSDARLAALAGLDEEDIAKRRTELG 540

Query: 607  VIPSYKRVDTCAAEFEANTPYMYSSYD------FECESAPTQKKKVLILGGGPNRIGQGI 660
            V P YKR+DTCAAEF + T YMYS+Y+         E  P+ +KKV+ILGGGPNRIGQGI
Sbjct: 541  VHPVYKRIDTCAAEFASPTAYMYSTYEEPFAGTLADECKPSDRKKVIILGGGPNRIGQGI 600

Query: 661  EFDYCCCHTSFSLQSAGYETIMMNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERP- 719
            EFDYCCCH  F+L+ AGYE+IM+N NPETVSTDYDTSDRLYFEPLT EDVL +I  E+  
Sbjct: 601  EFDYCCCHACFALEEAGYESIMINCNPETVSTDYDTSDRLYFEPLTAEDVLEIIRAEQSN 660

Query: 720  ---EGIIVQFGGQTPLKLSLPIHQYLDEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFN 776
                G+IVQFGGQTPLKL+    Q L +  +P         I GTSPD ID AEDR+RF 
Sbjct: 661  GTLHGVIVQFGGQTPLKLA----QALVKADVP---------ILGTSPDMIDLAEDRDRFQ 707

Query: 777  AIIKELSIEQPKGGIAKSEADALAIAKEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLE 836
             ++  L ++QP+ GIA S      IA ++G P+VVRPSYVLGGRAM+I+  +E L +YL 
Sbjct: 708  KLLTRLGLKQPQNGIAYSVEQGRLIAGQLGLPLVVRPSYVLGGRAMQIIRDEEALNSYLL 767

Query: 837  NAV-EVDP--------------------ERPVLIDKYLSDAIEIDVDALADSCGNVVIGG 875
              + E+ P                      P+L D+YL  AIE+DVDAL D   +V + G
Sbjct: 768  GTLPELIPGDIRAKYPNDKTGQINTLLGTNPLLFDRYLDGAIEVDVDALCDG-KDVFVCG 826

Query: 876  IMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNCQYAITTSGD 935
            IMEHIE+AG+HSGDSAC +P  ++S   +  +   T  LA+ L V GLMN QYAI   G+
Sbjct: 827  IMEHIEEAGIHSGDSACSLPPYSLSKDLIAELKRQTEALARALQVGGLMNVQYAI-RDGE 885

Query: 936  VYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPKHVSVKEAVLP 995
            +Y+LE NPRASRTVPFV+K IG P+AK A+ +M+G+SL   G T+     HV+VKEAV P
Sbjct: 886  IYVLEVNPRASRTVPFVAKTIGAPIAKIASRIMAGESLASFGLTENTY-SHVAVKEAVFP 944

Query: 996  FEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVFLSLNDLTKPH 1055
            F +F G D +LGPEMRSTGEVMG+D +F  AFAK+QIA+G  +P  GTVF+S+ D  K  
Sbjct: 945  FARFPGVDTVLGPEMRSTGEVMGLDRAFATAFAKSQIASGTGVPEGGTVFISMRDQDKAG 1004

Query: 1056 LERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVANGQIQMMVIT 1115
            +    +    +GF+I++TSGT  +LE +GIA  ++ K+ EGRPH  D + NG++Q++  T
Sbjct: 1005 VVDAVRRLERLGFRIIATSGTQRYLEAQGIACAKINKVLEGRPHIVDAIKNGEVQLVFNT 1064

Query: 1116 SSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTVTMTALQDFF 1171
            + G      D   +RR  L +KVP  TT++GA+A A+ I + KS ++ +  LQ +F
Sbjct: 1065 TEGAQALS-DSRSMRRAALLHKVPYYTTLAGAVAAAKGIEAYKSGSLEVRPLQSYF 1119


>gi|161612394|ref|YP_001586359.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Paratyphi B str. SPB7]
 gi|168234815|ref|ZP_02659873.1| carbamoyl-phosphate synthase, large subunit [Salmonella enterica
            subsp. enterica serovar Schwarzengrund str. SL480]
 gi|168262261|ref|ZP_02684234.1| carbamoyl-phosphate synthase, large subunit [Salmonella enterica
            subsp. enterica serovar Hadar str. RI_05P066]
 gi|168464396|ref|ZP_02698299.1| carbamoyl-phosphate synthase, large subunit [Salmonella enterica
            subsp. enterica serovar Newport str. SL317]
 gi|194735374|ref|YP_002113082.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Schwarzengrund str. CVM19633]
 gi|205351409|ref|YP_002225210.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Gallinarum str. 287/91]
 gi|207855581|ref|YP_002242232.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Enteritidis str. P125109]
 gi|375122181|ref|ZP_09767345.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Gallinarum str. SG9]
 gi|416422885|ref|ZP_11690463.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Montevideo str. 315996572]
 gi|416429524|ref|ZP_11694586.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Montevideo str. 495297-1]
 gi|416439596|ref|ZP_11700315.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Montevideo str. 495297-3]
 gi|416446853|ref|ZP_11705365.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Montevideo str. 495297-4]
 gi|416455043|ref|ZP_11710668.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Montevideo str. 515920-1]
 gi|416458127|ref|ZP_11712729.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Montevideo str. 515920-2]
 gi|416469064|ref|ZP_11718277.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Montevideo str. 531954]
 gi|416473999|ref|ZP_11719880.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Montevideo str. NC_MB110209-0054]
 gi|416494034|ref|ZP_11728063.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Montevideo str. OH_2009072675]
 gi|416495644|ref|ZP_11728694.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Montevideo str. CASC_09SCPH15965]
 gi|416547266|ref|ZP_11754438.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Montevideo str. 19N]
 gi|416577940|ref|ZP_11770160.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Montevideo str. 81038-01]
 gi|416588030|ref|ZP_11776566.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Montevideo str. MD_MDA09249507]
 gi|416592527|ref|ZP_11779337.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Montevideo str. 414877]
 gi|416600398|ref|ZP_11784345.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Montevideo str. 366867]
 gi|416608977|ref|ZP_11789709.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Montevideo str. 413180]
 gi|416612788|ref|ZP_11791725.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Montevideo str. 446600]
 gi|416620037|ref|ZP_11795418.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Montevideo str. 609458-1]
 gi|416627970|ref|ZP_11799290.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Montevideo str. 556150-1]
 gi|416644831|ref|ZP_11807045.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Montevideo str. 609460]
 gi|416652410|ref|ZP_11811731.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Montevideo str. 507440-20]
 gi|416657659|ref|ZP_11813875.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Montevideo str. 556152]
 gi|416667761|ref|ZP_11818490.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Montevideo str. MB101509-0077]
 gi|416683839|ref|ZP_11824632.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Montevideo str. MB102109-0047]
 gi|416694620|ref|ZP_11827216.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Montevideo str. MB110209-0055]
 gi|416708219|ref|ZP_11833081.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Montevideo str. MB111609-0052]
 gi|416710360|ref|ZP_11834465.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Montevideo str. 2009083312]
 gi|416717498|ref|ZP_11839750.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Montevideo str. 2009085258]
 gi|416726484|ref|ZP_11846545.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Montevideo str. 315731156]
 gi|416729329|ref|ZP_11847933.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Montevideo str. IA_2009159199]
 gi|416739351|ref|ZP_11853754.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Montevideo str. IA_2010008282]
 gi|416748130|ref|ZP_11858532.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Montevideo str. IA_2010008283]
 gi|416756916|ref|ZP_11862807.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Montevideo str. IA_2010008284]
 gi|416763545|ref|ZP_11867219.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Montevideo str. IA_2010008285]
 gi|416767671|ref|ZP_11870047.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Montevideo str. IA_2010008287]
 gi|418484666|ref|ZP_13053658.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Montevideo str. 80959-06]
 gi|418487004|ref|ZP_13055850.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Montevideo str. CT_02035278]
 gi|418494978|ref|ZP_13061423.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Montevideo str. CT_02035318]
 gi|418501299|ref|ZP_13067688.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Montevideo str. CT_02035320]
 gi|418504019|ref|ZP_13070378.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Montevideo str. CT_02035321]
 gi|418508677|ref|ZP_13074980.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Montevideo str. CT_02035327]
 gi|418524115|ref|ZP_13090102.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Montevideo str. IA_2010008286]
 gi|418762537|ref|ZP_13318664.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Newport str. CVM 35185]
 gi|418768439|ref|ZP_13324487.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Newport str. CVM 35199]
 gi|418770487|ref|ZP_13326508.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Newport str. CVM 21539]
 gi|418777744|ref|ZP_13333671.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Newport str. CVM 33953]
 gi|418779278|ref|ZP_13335181.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Newport str. CVM 35188]
 gi|418786736|ref|ZP_13342549.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Newport str. CVM 21559]
 gi|418800971|ref|ZP_13356615.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Newport str. CVM 35202]
 gi|419788617|ref|ZP_14314301.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Newport str. Levine 1]
 gi|419791619|ref|ZP_14317271.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Newport str. Levine 15]
 gi|421356558|ref|ZP_15806878.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Enteritidis str. 622731-39]
 gi|421362993|ref|ZP_15813236.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Enteritidis str. 639016-6]
 gi|421366055|ref|ZP_15816260.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Enteritidis str. 640631]
 gi|421370974|ref|ZP_15821134.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Enteritidis str. 77-0424]
 gi|421374916|ref|ZP_15825037.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Enteritidis str. 607307-6]
 gi|421379778|ref|ZP_15829843.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Enteritidis str. 485549-17]
 gi|421386378|ref|ZP_15836392.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Enteritidis str. 596866-22]
 gi|421388729|ref|ZP_15838715.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Enteritidis str. 596866-70]
 gi|421394547|ref|ZP_15844487.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Enteritidis str. 629164-26]
 gi|421399096|ref|ZP_15848992.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Enteritidis str. 629164-37]
 gi|421403631|ref|ZP_15853476.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Enteritidis str. 639672-46]
 gi|421406867|ref|ZP_15856679.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Enteritidis str. 639672-50]
 gi|421413912|ref|ZP_15863662.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Enteritidis str. 77-1427]
 gi|421417086|ref|ZP_15866797.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Enteritidis str. 77-2659]
 gi|421423083|ref|ZP_15872747.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Enteritidis str. 78-1757]
 gi|421426052|ref|ZP_15875681.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Enteritidis str. 22510-1]
 gi|421431504|ref|ZP_15881086.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Enteritidis str. 8b-1]
 gi|421433740|ref|ZP_15883298.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Enteritidis str. 648905 5-18]
 gi|421439875|ref|ZP_15889356.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Enteritidis str. 648901 6-18]
 gi|421446168|ref|ZP_15895588.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Enteritidis str. 50-3079]
 gi|421449025|ref|ZP_15898410.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Enteritidis str. 58-6482]
 gi|436600730|ref|ZP_20512971.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Enteritidis str. 22704]
 gi|436800377|ref|ZP_20524411.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Enteritidis str. CHS44]
 gi|436806566|ref|ZP_20526721.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Enteritidis str. CDC_2010K_1882]
 gi|436812763|ref|ZP_20531095.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Enteritidis str. CDC_2010K_1884]
 gi|436830928|ref|ZP_20535638.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Enteritidis str. CDC_2010K_1594]
 gi|436852218|ref|ZP_20542539.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Enteritidis str. CDC_2010K_1566]
 gi|436855510|ref|ZP_20544668.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Enteritidis str. CDC_2010K_1580]
 gi|436866009|ref|ZP_20551785.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Enteritidis str. CDC_2010K_1543]
 gi|436870680|ref|ZP_20554315.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Enteritidis str. CDC_2010K_1441]
 gi|436876963|ref|ZP_20558130.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Enteritidis str. CDC_2010K_1810]
 gi|436887507|ref|ZP_20563844.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Enteritidis str. CDC_2010K_1558]
 gi|436895130|ref|ZP_20568193.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Enteritidis str. CDC_2010K_1018]
 gi|436902085|ref|ZP_20572914.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Enteritidis str. CDC_2010K_1010]
 gi|436908973|ref|ZP_20575861.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Enteritidis str. CDC_2010K_1729]
 gi|436919970|ref|ZP_20582729.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Enteritidis str. CDC_2010K_0895]
 gi|436924261|ref|ZP_20585409.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Enteritidis str. CDC_2010K_0899]
 gi|436933632|ref|ZP_20589839.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Enteritidis str. CDC_2010K_1457]
 gi|436940344|ref|ZP_20594352.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Enteritidis str. CDC_2010K_1747]
 gi|436952787|ref|ZP_20601359.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Enteritidis str. CDC_2010K_0968]
 gi|436958690|ref|ZP_20603225.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Enteritidis str. CDC_2010K_1444]
 gi|436972143|ref|ZP_20610145.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Enteritidis str. CDC_2010K_1445]
 gi|436978510|ref|ZP_20612513.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Enteritidis str. CDC_2010K_1559]
 gi|436993060|ref|ZP_20618047.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Enteritidis str. CDC_2010K_1565]
 gi|437003519|ref|ZP_20621699.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Enteritidis str. CDC_2010K_1808]
 gi|437023050|ref|ZP_20628860.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Enteritidis str. CDC_2010K_1811]
 gi|437036870|ref|ZP_20634149.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Enteritidis str. CDC_2010K_0956]
 gi|437042156|ref|ZP_20635872.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Enteritidis str. CDC_2010K_1455]
 gi|437048715|ref|ZP_20639729.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Enteritidis str. CDC_2010K_1575]
 gi|437060165|ref|ZP_20646328.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Enteritidis str. CDC_2010K_1725]
 gi|437064327|ref|ZP_20648348.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Enteritidis str. CDC_2010K_1745]
 gi|437072946|ref|ZP_20652756.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Enteritidis str. CDC_2010K_1791]
 gi|437080923|ref|ZP_20657463.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Enteritidis str. CDC_2010K_1795]
 gi|437093566|ref|ZP_20663883.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Enteritidis str. 576709]
 gi|437109019|ref|ZP_20667560.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Enteritidis str. 635290-58]
 gi|437120843|ref|ZP_20671617.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Enteritidis str. 607308-16]
 gi|437130518|ref|ZP_20676687.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Enteritidis str. 607308-19]
 gi|437138589|ref|ZP_20681113.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Enteritidis str. 607307-2]
 gi|437142942|ref|ZP_20683954.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Enteritidis str. 607308-9]
 gi|437152797|ref|ZP_20690049.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Enteritidis str. 629163]
 gi|437159373|ref|ZP_20693865.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Enteritidis str. SE15-1]
 gi|437171070|ref|ZP_20700365.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Enteritidis str. CVM_N202]
 gi|437174941|ref|ZP_20702442.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Enteritidis str. CVM_56-3991]
 gi|437182113|ref|ZP_20706845.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Enteritidis str. CVM_76-3618]
 gi|437246981|ref|ZP_20714856.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Enteritidis str. 13183-1]
 gi|437260701|ref|ZP_20717822.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Enteritidis str. CVM_81-2490]
 gi|437269650|ref|ZP_20722871.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Enteritidis str. SL909]
 gi|437281100|ref|ZP_20728381.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Enteritidis str. SL913]
 gi|437286988|ref|ZP_20730490.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Enteritidis str. CVM_69-4941]
 gi|437316954|ref|ZP_20737892.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Enteritidis str. 638970-15]
 gi|437331591|ref|ZP_20741966.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Enteritidis str. 17927]
 gi|437341086|ref|ZP_20744528.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Enteritidis str. CHS4]
 gi|437397578|ref|ZP_20751488.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Enteritidis str. 22558]
 gi|437422720|ref|ZP_20755212.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Enteritidis str. 543463 22-17]
 gi|437451897|ref|ZP_20759584.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Enteritidis str. 543463 40-18]
 gi|437459285|ref|ZP_20761137.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Enteritidis str. 561362 1-1]
 gi|437474193|ref|ZP_20766212.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Enteritidis str. 642044 4-1]
 gi|437489992|ref|ZP_20770772.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Enteritidis str. 642046 4-7]
 gi|437518895|ref|ZP_20778566.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Enteritidis str. 648898 4-5]
 gi|437535641|ref|ZP_20781591.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Enteritidis str. 648899 3-17]
 gi|437553934|ref|ZP_20784151.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Enteritidis str. 648900 1-16]
 gi|437576364|ref|ZP_20790533.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Enteritidis str. 648901 1-17]
 gi|437596912|ref|ZP_20796527.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Enteritidis str. 648901 39-2]
 gi|437604128|ref|ZP_20798758.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Enteritidis str. 648902 6-8]
 gi|437615929|ref|ZP_20802507.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Enteritidis str. 648903 1-6]
 gi|437650202|ref|ZP_20809763.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Enteritidis str. 648904 3-6]
 gi|437661729|ref|ZP_20813167.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Enteritidis str. 653049 13-19]
 gi|437674178|ref|ZP_20816331.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Enteritidis str. 642044 8-1]
 gi|437696512|ref|ZP_20822473.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Enteritidis str. 561362 9-7]
 gi|437717205|ref|ZP_20828192.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Enteritidis str. 543463 42-20]
 gi|437729305|ref|ZP_20830662.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Enteritidis str. 648901 16-16]
 gi|437792248|ref|ZP_20837274.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Enteritidis str. 76-2651]
 gi|437803661|ref|ZP_20838574.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Enteritidis str. 33944]
 gi|437816191|ref|ZP_20842551.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Enteritidis str. SARB17]
 gi|438043974|ref|ZP_20855911.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Enteritidis str. 50-5646]
 gi|438085804|ref|ZP_20858912.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Enteritidis str. 81-2625]
 gi|438099034|ref|ZP_20863156.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Enteritidis str. 62-1976]
 gi|438108097|ref|ZP_20866852.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Enteritidis str. 53-407]
 gi|445129193|ref|ZP_21380660.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Gallinarum str. 9184]
 gi|445218012|ref|ZP_21402431.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Enteritidis str. 20037]
 gi|445232902|ref|ZP_21406196.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Enteritidis str. SE10]
 gi|445328170|ref|ZP_21412834.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Enteritidis str. 18569]
 gi|445352841|ref|ZP_21420848.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Enteritidis str. 13-1]
 gi|445358290|ref|ZP_21422554.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Enteritidis str. PT23]
 gi|161361758|gb|ABX65526.1| hypothetical protein SPAB_00083 [Salmonella enterica subsp. enterica
            serovar Paratyphi B str. SPB7]
 gi|194710876|gb|ACF90097.1| carbamoyl-phosphate synthase, large subunit [Salmonella enterica
            subsp. enterica serovar Schwarzengrund str. CVM19633]
 gi|195632923|gb|EDX51377.1| carbamoyl-phosphate synthase, large subunit [Salmonella enterica
            subsp. enterica serovar Newport str. SL317]
 gi|197291819|gb|EDY31169.1| carbamoyl-phosphate synthase, large subunit [Salmonella enterica
            subsp. enterica serovar Schwarzengrund str. SL480]
 gi|205271190|emb|CAR35977.1| carbamoyl-phosphate synthase large chain [Salmonella enterica subsp.
            enterica serovar Gallinarum str. 287/91]
 gi|205348866|gb|EDZ35497.1| carbamoyl-phosphate synthase, large subunit [Salmonella enterica
            subsp. enterica serovar Hadar str. RI_05P066]
 gi|206707384|emb|CAR31657.1| carbamoyl-phosphate synthase large chain [Salmonella enterica subsp.
            enterica serovar Enteritidis str. P125109]
 gi|322615889|gb|EFY12806.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Montevideo str. 315996572]
 gi|322620674|gb|EFY17534.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Montevideo str. 495297-1]
 gi|322623975|gb|EFY20812.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Montevideo str. 495297-3]
 gi|322627423|gb|EFY24214.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Montevideo str. 495297-4]
 gi|322630730|gb|EFY27494.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Montevideo str. 515920-1]
 gi|322638050|gb|EFY34751.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Montevideo str. 515920-2]
 gi|322640534|gb|EFY37185.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Montevideo str. 531954]
 gi|322647674|gb|EFY44159.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Montevideo str. NC_MB110209-0054]
 gi|322648381|gb|EFY44836.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Montevideo str. OH_2009072675]
 gi|322656942|gb|EFY53228.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Montevideo str. CASC_09SCPH15965]
 gi|322657347|gb|EFY53619.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Montevideo str. 19N]
 gi|322663667|gb|EFY59867.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Montevideo str. 81038-01]
 gi|322666500|gb|EFY62678.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Montevideo str. MD_MDA09249507]
 gi|322672341|gb|EFY68453.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Montevideo str. 414877]
 gi|322676347|gb|EFY72418.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Montevideo str. 366867]
 gi|322679560|gb|EFY75605.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Montevideo str. 413180]
 gi|322686111|gb|EFY82095.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Montevideo str. 446600]
 gi|323194955|gb|EFZ80141.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Montevideo str. 609458-1]
 gi|323200136|gb|EFZ85223.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Montevideo str. 556150-1]
 gi|323201043|gb|EFZ86112.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Montevideo str. 609460]
 gi|323212308|gb|EFZ97132.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Montevideo str. 556152]
 gi|323216613|gb|EGA01339.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Montevideo str. MB101509-0077]
 gi|323219343|gb|EGA03829.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Montevideo str. MB102109-0047]
 gi|323225759|gb|EGA09979.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Montevideo str. MB110209-0055]
 gi|323228700|gb|EGA12829.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Montevideo str. MB111609-0052]
 gi|323236686|gb|EGA20762.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Montevideo str. 2009083312]
 gi|323239813|gb|EGA23860.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Montevideo str. 2009085258]
 gi|323242139|gb|EGA26168.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Montevideo str. 315731156]
 gi|323249436|gb|EGA33352.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Montevideo str. IA_2009159199]
 gi|323252229|gb|EGA36080.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Montevideo str. IA_2010008282]
 gi|323256680|gb|EGA40410.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Montevideo str. IA_2010008283]
 gi|323261286|gb|EGA44873.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Montevideo str. IA_2010008284]
 gi|323265534|gb|EGA49030.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Montevideo str. IA_2010008285]
 gi|323271678|gb|EGA55096.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Montevideo str. IA_2010008287]
 gi|326626431|gb|EGE32774.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Gallinarum str. SG9]
 gi|366057923|gb|EHN22220.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Montevideo str. 80959-06]
 gi|366060019|gb|EHN24284.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Montevideo str. CT_02035318]
 gi|366066813|gb|EHN30971.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Montevideo str. CT_02035320]
 gi|366071448|gb|EHN35547.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Montevideo str. CT_02035278]
 gi|366072347|gb|EHN36439.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Montevideo str. CT_02035321]
 gi|366079932|gb|EHN43914.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Montevideo str. CT_02035327]
 gi|366827014|gb|EHN53924.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Montevideo str. 507440-20]
 gi|372207777|gb|EHP21274.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Montevideo str. IA_2010008286]
 gi|392616703|gb|EIW99132.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Newport str. Levine 1]
 gi|392620482|gb|EIX02851.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Newport str. Levine 15]
 gi|392731170|gb|EIZ88399.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Newport str. CVM 35199]
 gi|392736014|gb|EIZ93181.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Newport str. CVM 35185]
 gi|392737081|gb|EIZ94242.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Newport str. CVM 21539]
 gi|392743672|gb|EJA00742.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Newport str. CVM 33953]
 gi|392747566|gb|EJA04564.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Newport str. CVM 21559]
 gi|392753434|gb|EJA10364.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Newport str. CVM 35188]
 gi|392782562|gb|EJA39196.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Newport str. CVM 35202]
 gi|395988241|gb|EJH97398.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Enteritidis str. 639016-6]
 gi|395990883|gb|EJI00009.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Enteritidis str. 640631]
 gi|395993477|gb|EJI02571.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Enteritidis str. 622731-39]
 gi|396004745|gb|EJI13726.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Enteritidis str. 77-0424]
 gi|396005595|gb|EJI14572.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Enteritidis str. 485549-17]
 gi|396007173|gb|EJI16132.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Enteritidis str. 607307-6]
 gi|396013284|gb|EJI22172.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Enteritidis str. 596866-22]
 gi|396014997|gb|EJI23881.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Enteritidis str. 629164-26]
 gi|396019135|gb|EJI27993.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Enteritidis str. 596866-70]
 gi|396028418|gb|EJI37179.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Enteritidis str. 639672-46]
 gi|396028442|gb|EJI37202.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Enteritidis str. 629164-37]
 gi|396033036|gb|EJI41752.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Enteritidis str. 639672-50]
 gi|396038341|gb|EJI46981.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Enteritidis str. 77-1427]
 gi|396038759|gb|EJI47394.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Enteritidis str. 78-1757]
 gi|396042971|gb|EJI51585.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Enteritidis str. 77-2659]
 gi|396052363|gb|EJI60870.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Enteritidis str. 8b-1]
 gi|396055148|gb|EJI63639.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Enteritidis str. 22510-1]
 gi|396061667|gb|EJI70089.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Enteritidis str. 648905 5-18]
 gi|396063586|gb|EJI71977.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Enteritidis str. 50-3079]
 gi|396069121|gb|EJI77465.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Enteritidis str. 648901 6-18]
 gi|396071256|gb|EJI79582.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Enteritidis str. 58-6482]
 gi|434958905|gb|ELL52418.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Enteritidis str. CHS44]
 gi|434969091|gb|ELL61805.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Enteritidis str. CDC_2010K_1882]
 gi|434975353|gb|ELL67654.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Enteritidis str. 22704]
 gi|434975753|gb|ELL68027.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Enteritidis str. CDC_2010K_1884]
 gi|434982558|gb|ELL74368.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Enteritidis str. CDC_2010K_1594]
 gi|434984899|gb|ELL76599.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Enteritidis str. CDC_2010K_1566]
 gi|434992264|gb|ELL83721.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Enteritidis str. CDC_2010K_1580]
 gi|434994330|gb|ELL85680.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Enteritidis str. CDC_2010K_1543]
 gi|435001454|gb|ELL92546.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Enteritidis str. CDC_2010K_1441]
 gi|435009001|gb|ELL99797.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Enteritidis str. CDC_2010K_1810]
 gi|435010568|gb|ELM01333.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Enteritidis str. CDC_2010K_1558]
 gi|435017246|gb|ELM07753.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Enteritidis str. CDC_2010K_1018]
 gi|435019872|gb|ELM10300.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Enteritidis str. CDC_2010K_1010]
 gi|435028668|gb|ELM18741.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Enteritidis str. CDC_2010K_0895]
 gi|435029813|gb|ELM19862.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Enteritidis str. CDC_2010K_1729]
 gi|435041140|gb|ELM30892.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Enteritidis str. CDC_2010K_0899]
 gi|435042416|gb|ELM32136.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Enteritidis str. CDC_2010K_1457]
 gi|435046318|gb|ELM35935.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Enteritidis str. CDC_2010K_1747]
 gi|435049492|gb|ELM39019.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Enteritidis str. CDC_2010K_0968]
 gi|435055526|gb|ELM44937.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Enteritidis str. CDC_2010K_1444]
 gi|435055725|gb|ELM45135.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Enteritidis str. CDC_2010K_1445]
 gi|435066104|gb|ELM55194.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Enteritidis str. CDC_2010K_1565]
 gi|435069416|gb|ELM58416.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Enteritidis str. CDC_2010K_1559]
 gi|435073176|gb|ELM62065.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Enteritidis str. CDC_2010K_1808]
 gi|435073541|gb|ELM62414.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Enteritidis str. CDC_2010K_0956]
 gi|435075872|gb|ELM64677.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Enteritidis str. CDC_2010K_1811]
 gi|435084743|gb|ELM73312.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Enteritidis str. CDC_2010K_1455]
 gi|435092062|gb|ELM80435.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Enteritidis str. CDC_2010K_1725]
 gi|435098568|gb|ELM86809.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Enteritidis str. CDC_2010K_1575]
 gi|435100812|gb|ELM88967.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Enteritidis str. CDC_2010K_1745]
 gi|435109000|gb|ELM96955.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Enteritidis str. CDC_2010K_1791]
 gi|435111301|gb|ELM99205.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Enteritidis str. 576709]
 gi|435112253|gb|ELN00130.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Enteritidis str. CDC_2010K_1795]
 gi|435119214|gb|ELN06835.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Enteritidis str. 635290-58]
 gi|435125673|gb|ELN13114.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Enteritidis str. 607308-19]
 gi|435126527|gb|ELN13922.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Enteritidis str. 607308-16]
 gi|435133041|gb|ELN20224.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Enteritidis str. 607307-2]
 gi|435141461|gb|ELN28402.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Enteritidis str. 607308-9]
 gi|435141819|gb|ELN28749.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Enteritidis str. 629163]
 gi|435146714|gb|ELN33496.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Enteritidis str. CVM_N202]
 gi|435149438|gb|ELN36133.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Enteritidis str. SE15-1]
 gi|435157181|gb|ELN43642.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Enteritidis str. CVM_56-3991]
 gi|435164105|gb|ELN50218.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Enteritidis str. CVM_81-2490]
 gi|435165428|gb|ELN51479.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Enteritidis str. CVM_76-3618]
 gi|435169749|gb|ELN55519.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Enteritidis str. SL913]
 gi|435171027|gb|ELN56671.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Enteritidis str. 13183-1]
 gi|435171915|gb|ELN57470.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Enteritidis str. SL909]
 gi|435179410|gb|ELN64558.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Enteritidis str. 638970-15]
 gi|435184287|gb|ELN69232.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Enteritidis str. CVM_69-4941]
 gi|435188786|gb|ELN73461.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Enteritidis str. 17927]
 gi|435193972|gb|ELN78432.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Enteritidis str. CHS4]
 gi|435198318|gb|ELN82523.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Enteritidis str. 22558]
 gi|435200342|gb|ELN84343.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Enteritidis str. 543463 22-17]
 gi|435208738|gb|ELN92144.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Enteritidis str. 543463 40-18]
 gi|435222534|gb|ELO04642.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Enteritidis str. 561362 1-1]
 gi|435224680|gb|ELO06641.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Enteritidis str. 642044 4-1]
 gi|435227599|gb|ELO09076.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Enteritidis str. 648898 4-5]
 gi|435230826|gb|ELO12091.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Enteritidis str. 642046 4-7]
 gi|435240407|gb|ELO20809.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Enteritidis str. 648899 3-17]
 gi|435243712|gb|ELO23968.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Enteritidis str. 648901 1-17]
 gi|435244115|gb|ELO24346.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Enteritidis str. 648900 1-16]
 gi|435249475|gb|ELO29300.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Enteritidis str. 648901 39-2]
 gi|435257626|gb|ELO36906.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Enteritidis str. 648902 6-8]
 gi|435262305|gb|ELO41434.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Enteritidis str. 648903 1-6]
 gi|435267894|gb|ELO46534.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Enteritidis str. 648904 3-6]
 gi|435268214|gb|ELO46827.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Enteritidis str. 653049 13-19]
 gi|435276946|gb|ELO54930.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Enteritidis str. 561362 9-7]
 gi|435278562|gb|ELO56392.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Enteritidis str. 642044 8-1]
 gi|435284223|gb|ELO61719.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Enteritidis str. 543463 42-20]
 gi|435290195|gb|ELO67136.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Enteritidis str. 648901 16-16]
 gi|435293908|gb|ELO70566.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Enteritidis str. 76-2651]
 gi|435303294|gb|ELO79201.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Enteritidis str. 33944]
 gi|435308781|gb|ELO83699.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Enteritidis str. SARB17]
 gi|435319008|gb|ELO91896.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Enteritidis str. 81-2625]
 gi|435320716|gb|ELO93231.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Enteritidis str. 50-5646]
 gi|435326189|gb|ELO98023.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Enteritidis str. 62-1976]
 gi|435333216|gb|ELP04043.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Enteritidis str. 53-407]
 gi|444853709|gb|ELX78776.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Gallinarum str. 9184]
 gi|444856798|gb|ELX81820.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Enteritidis str. 20037]
 gi|444861949|gb|ELX86817.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Enteritidis str. SE10]
 gi|444873650|gb|ELX97943.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Enteritidis str. 13-1]
 gi|444880299|gb|ELY04378.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Enteritidis str. 18569]
 gi|444886203|gb|ELY09968.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Enteritidis str. PT23]
          Length = 1075

 Score = 1227 bits (3174), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 617/1078 (57%), Positives = 784/1078 (72%), Gaps = 19/1078 (1%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILILGAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  E+V +++EKERPDA+LPTMGGQTALN A+ L   G LE++GV +IGA  DA
Sbjct: 63   ATYIEPIHWEVVRKIIEKERPDAVLPTMGGQTALNCALELERQGVLEEFGVTMIGATADA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  F  AMK IG+ T  SGI +T++E +++A ++G FP IIRP+FT+GGTGGGI
Sbjct: 123  IDKAEDRRRFDIAMKKIGLDTARSGIAHTMEEALAVAADVG-FPCIIRPSFTMGGTGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEFE IC+ GL  S T+++L+++SL+GWKEYE+EV+RD  DN +I+CSIEN D MG
Sbjct: 182  AYNREEFEEICERGLDLSPTNELLIDESLIGWKEYEMEVVRDKNDNCIIVCSIENFDAMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            +HTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGVE GGSNVQFAVNP +G ++VIEMN
Sbjct: 242  IHTGDSITVAPAQTLTDKEYQIMRNASMAVLREIGVETGGSNVQFAVNPKNGRLIVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT  +TPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGYTLDELMNDITGGRTPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            F FEKF G+   LTTQMKSVGE MA+GRT QES QKALR LE G +G+      +     
Sbjct: 362  FNFEKFAGANDRLTTQMKSVGEVMAIGRTQQESLQKALRGLEVGATGFDPKVSLDDPEAL 421

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
             +++  L+    DR+  I  A + G+ VD +  L+ ID+WFL Q +EL+ +E+ +    +
Sbjct: 422  TKIRRELKDAGADRIWYIADAFRAGLSVDGVFNLTNIDRWFLVQIEELVRLEEKVAEVGI 481

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
            + +  D   ++KR+GF+D ++A      E E+R+ R    + P YKRVDTCAAEF  +T 
Sbjct: 482  TGLNADFLRQLKRKGFADARLAKLAGVREAEIRKLRDQYDLHPVYKRVDTCAAEFATDTA 541

Query: 627  YMYSSYDFECESAPT-QKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNS 685
            YMYS+Y+ ECE+ P+  + K+++LGGGPNRIGQGIEFDYCC H S +L+  GYETIM+N 
Sbjct: 542  YMYSTYEDECEANPSVDRDKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVNC 601

Query: 686  NPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEH 745
            NPETVSTDYDTSDRLYFEP+T+EDVL ++ +E+P+G+IVQ+GGQTPLKL+          
Sbjct: 602  NPETVSTDYDTSDRLYFEPVTLEDVLEIVRIEKPKGVIVQYGGQTPLKLA---------- 651

Query: 746  RLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEI 805
            R   A+G   V + GTSPD+ID AEDRERF   +  L ++QP      +   A+  AKEI
Sbjct: 652  RALEAAG---VPVIGTSPDAIDRAEDRERFQHAVDRLKLKQPANATVTAIEQAVEKAKEI 708

Query: 806  GYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALA 865
            GYP+VVRPSYVLGGRAMEIVY +  L  Y + AV V  + PVL+D++L DA+E+DVDA+ 
Sbjct: 709  GYPLVVRPSYVLGGRAMEIVYDEADLRRYFQTAVSVSNDAPVLLDRFLDDAVEVDVDAIC 768

Query: 866  DSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMN 925
            D    V+IGGIMEHIEQAGVHSGDSAC +P  T+S    D +     KLA  L V GLMN
Sbjct: 769  DG-EMVLIGGIMEHIEQAGVHSGDSACSLPAYTLSQEIQDVMRQQVQKLAFELQVRGLMN 827

Query: 926  CQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPK 985
             Q+A+  + +VYL+E NPRA+RTVPFVSKA G PLAK AA VM+GKSL + G T+E+IP 
Sbjct: 828  VQFAVKDN-EVYLIEVNPRAARTVPFVSKATGVPLAKVAARVMAGKSLTEQGVTQEIIPP 886

Query: 986  HVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVF 1045
            + SVKE VLPF KF G D LLGPEMRSTGEVMG+  +F  AFAKAQ+ +   +   G   
Sbjct: 887  YYSVKEVVLPFNKFPGVDPLLGPEMRSTGEVMGVGRTFAEAFAKAQLGSNSTMKKQGRAL 946

Query: 1046 LSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVA 1105
            LS+ +  K  +  +A   L  GF++ +T GTA  L   GI    V K+HEGRPH  D + 
Sbjct: 947  LSVREGDKERVVDLAAKLLKQGFELDATHGTAIVLGEAGINPRLVNKVHEGRPHIQDRIK 1006

Query: 1106 NGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTVT 1163
            NG+   ++ T++G    + D   +RR  L YKV   TT++G  A   A+ +  +  VT
Sbjct: 1007 NGEYTYIINTTAGRRAIE-DSRVIRRSALQYKVHYDTTLNGGFATTMALNADATEKVT 1063


>gi|411008805|ref|ZP_11385134.1| carbamoyl phosphate synthase large subunit [Aeromonas aquariorum
            AAK1]
          Length = 1078

 Score = 1227 bits (3174), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 607/1068 (56%), Positives = 780/1068 (73%), Gaps = 18/1068 (1%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KR DL+ ILILGAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRNDLQSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+T E+V ++++KERPDA+LPTMGGQTALN A+ L + G L ++GVE+IGA  DA
Sbjct: 63   ATYIEPITWEVVREIIKKERPDAILPTMGGQTALNCALDLEKHGVLAEFGVEMIGATADA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  F +AM++IG++ P +GI + ++E   +  E+G FP IIRP+FT+GG+GGGI
Sbjct: 123  IDKAEDRSRFDKAMRSIGLECPRAGIAHNMEEAWKVQAEVG-FPCIIRPSFTMGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN EEF  IC+ GL  S T ++L+++SL+GWKEYE+EV+RD  DN +I+C+IEN DPMG
Sbjct: 182  AYNTEEFVEICERGLDLSPTKELLIDESLIGWKEYEMEVVRDRNDNCIIVCAIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            +HTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGVE GGSNVQF +NP DG +++IEMN
Sbjct: 242  IHTGDSITVAPAQTLTDKEYQIMRNASMAVLREIGVETGGSNVQFGINPKDGRMVIIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL++GY+LD++ NDIT  +TPASFEP+IDYVVTK+PR
Sbjct: 302  PRVSRSSALASKATGFPIAKIAAKLAIGYTLDELMNDITGGRTPASFEPAIDYVVTKVPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            F FEKF G+   LTTQMKSVGE MA+GR FQES  KALR LE G +G+            
Sbjct: 362  FNFEKFAGANDRLTTQMKSVGEVMAIGRNFQESLHKALRGLETGKTGFDPMVDLNAPDAL 421

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
             ++++ L+    DR+  I  A + G+ +D +  L+ ID WFL Q +EL+ +E+ +  + +
Sbjct: 422  TRIRHELQDAGSDRIFYIADAFRAGLSMDGVFRLTKIDPWFLVQIEELVKLEEQVKERGM 481

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
            + +  D    +KR+GF+D ++A      E EVR+ R    + P YKRVDTCAAEF  NT 
Sbjct: 482  AGLDADFLRSLKRKGFADARLAKILGVAEGEVRKLRARHNIFPVYKRVDTCAAEFATNTA 541

Query: 627  YMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSN 686
            YMYSSYD ECE+ PT + K++++GGGPNRIGQGIEFDYCC H + +L+  GYETIM+N N
Sbjct: 542  YMYSSYDEECEANPTNRDKIMVIGGGPNRIGQGIEFDYCCVHAALALREDGYETIMVNCN 601

Query: 687  PETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHR 746
            PETVSTDYDTSDRLYFEP+T+EDVL ++ +E+P+G+IVQ+GGQTPLKL+          R
Sbjct: 602  PETVSTDYDTSDRLYFEPVTLEDVLEIVRVEQPKGVIVQYGGQTPLKLA----------R 651

Query: 747  LPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEIG 806
               A+G   V + GTSPD+ID AEDRERF + ++ L ++QP+ G   +   A+  A+ I 
Sbjct: 652  ALEANG---VPVIGTSPDAIDRAEDRERFQSAVERLGLKQPENGTVTALEQAVLTAERIT 708

Query: 807  YPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALAD 866
            YP+VVRPSYVLGGRAMEIVY ++ L  Y   AV V  E PVL+D++L DA E+DVDA+ D
Sbjct: 709  YPLVVRPSYVLGGRAMEIVYDEQDLRRYFAEAVSVSNESPVLLDRFLDDATEVDVDAICD 768

Query: 867  SCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNC 926
               +VVIGGIMEHIEQAG+HSGDSAC +P  T+S +  D +     KLA  L V GLMN 
Sbjct: 769  GV-DVVIGGIMEHIEQAGIHSGDSACSLPPYTLSKAIQDEMREQVRKLALELGVVGLMNV 827

Query: 927  QYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPKH 986
            Q+A+  + ++YL+E NPRA+RTVPFVSKA G PLAK AA VM+G+SL + GFT+E+IP +
Sbjct: 828  QFAVKDN-EIYLIEVNPRAARTVPFVSKATGAPLAKIAARVMAGQSLKEQGFTQEIIPPY 886

Query: 987  VSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVFL 1046
             SVKE VLPF KF G D LLGPEMRSTGEVMG+  SF  A+AKAQ+ AG ++P  G   L
Sbjct: 887  YSVKEVVLPFAKFPGVDPLLGPEMRSTGEVMGVGSSFAEAYAKAQLGAGHQVPREGRALL 946

Query: 1047 SLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVAN 1106
            S+    K  +  +A   L++G+ + +T GTA  L    I    V K+HEGRPH  D + N
Sbjct: 947  SVRHGDKERVVNLAAKLLELGYDLDATHGTAVTLGEASINPRLVNKVHEGRPHILDRIKN 1006

Query: 1107 GQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAI 1154
            G+   +V T+ G    + D  +LRR  L +KV   TT+  A A   AI
Sbjct: 1007 GEYTYIVNTAEGRRAIE-DSKQLRRGALQHKVAYTTTLHAAFATCMAI 1053


>gi|71732585|gb|EAO34638.1| Carbamoyl-phosphate synthase, large subunit, glutamine-dependent
            [Xylella fastidiosa subsp. sandyi Ann-1]
          Length = 1080

 Score = 1227 bits (3174), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 613/1068 (57%), Positives = 796/1068 (74%), Gaps = 21/1068 (1%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTDLR ILI+GAGPIVIGQACEFDYSG QACKAL+ EG+ V+L+NSNPATIMTDP +AD
Sbjct: 3    KRTDLRTILIIGAGPIVIGQACEFDYSGAQACKALRAEGFRVVLVNSNPATIMTDPDMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
              YI P+    VE+++ KE+PDALLPTMGGQTALN A+ LA+ G LEKYGVELIGAK +A
Sbjct: 63   AVYIEPIHWRTVEKIITKEKPDALLPTMGGQTALNCALDLADHGVLEKYGVELIGAKREA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I+ AEDR+LF+ AM+ IG++ P + +  +L+  + I  ++G FP IIRP+FTLGGTGGGI
Sbjct: 123  IRMAEDRELFRVAMQEIGLECPKAEVAKSLERALEIQAKVG-FPTIIRPSFTLGGTGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN++EFE I K GL  S   +VLVE+S+LGWKE+E+EV+RD +DN +I+CSIEN+DPMG
Sbjct: 182  AYNRQEFEEIIKRGLELSPVHEVLVEESVLGWKEFEMEVVRDASDNCIIVCSIENLDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTL+DKEYQRLRD SIA++R+IGV+ GGSNVQF ++P  G V+VIEMN
Sbjct: 242  VHTGDSITVAPAQTLSDKEYQRLRDASIAVLRKIGVDTGGSNVQFGIDPQTGRVVVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ N+IT  KTPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKIAAKLAVGYTLDELKNEITGGKTPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVK-ELDWD 505
            FAFEKFP ++  LTTQMKSVGE MA+GRTF ES QKA+R LE G  G   + +    + D
Sbjct: 362  FAFEKFPQADARLTTQMKSVGEVMAMGRTFAESLQKAVRGLETGKVGLEPTGLDLSSEDD 421

Query: 506  WEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQS 565
               LK  L+ P  +R+  +  A + G  V +++ LS+ID WFL Q +E++  E  L+T  
Sbjct: 422  LVVLKRELKAPGAERLFYVADAFRAGFAVADVYALSYIDPWFLDQIEEIVAAEGRLVTDG 481

Query: 566  VSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANT 625
            + ++      ++KR GFSD +IA  T + E  VR  R  L V P YKRVD+CA EF   T
Sbjct: 482  LGSIDGARLRQLKRIGFSDARIAQLTGTNEVAVRTLRRVLKVKPVYKRVDSCAGEFATGT 541

Query: 626  PYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNS 685
             Y+YS+Y+ ECE+AP+ ++K++ILGGGPNRIGQGIEFDYCC H + +L+  G+ETIM+N 
Sbjct: 542  AYLYSTYEEECEAAPSDRRKIMILGGGPNRIGQGIEFDYCCVHAALALREDGFETIMVNC 601

Query: 686  NPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEH 745
            NPETVSTDYDTSDRLYFEPLT+EDVL ++++E P G+IVQ+GGQTPLKL+    + L+ +
Sbjct: 602  NPETVSTDYDTSDRLYFEPLTLEDVLEIVEVEHPVGVIVQYGGQTPLKLA----KALEAN 657

Query: 746  RLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEI 805
             +P         + GTSP+SID AEDRERF  ++++L + QP    A++  +AL +A+EI
Sbjct: 658  GVP---------VIGTSPESIDLAEDRERFQRLVQQLGLRQPPNCTARTADEALVLAREI 708

Query: 806  GYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALA 865
            GYP+VVRPSYVLGGRAMEIVY++  L  Y+ +AV+V  + PVL+D++L +A+E+DVD +A
Sbjct: 709  GYPLVVRPSYVLGGRAMEIVYSEADLARYVRDAVKVSNDSPVLLDRFLDNAVEVDVDIIA 768

Query: 866  DSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMN 925
            D  G V+IGG+MEHIE+AGVHSGDS+C +P  ++S +  D +    I+LA+ LNV GLMN
Sbjct: 769  DPEGQVLIGGVMEHIEEAGVHSGDSSCSLPPYSLSVATQDDLRRQVIRLAQALNVIGLMN 828

Query: 926  CQYAITTSGD----VYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKE 981
             Q+AI ++ D    VYLLE NPRASRTVPFVSKA G PLAK AA  M+GK+L +   T E
Sbjct: 829  TQFAIQSNDDGSDIVYLLEVNPRASRTVPFVSKATGVPLAKIAARCMTGKTLAEQSVTCE 888

Query: 982  VIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLS 1041
            V+P + +VKEA+ PF K QG D +LGPEMRSTGEVMG+  SF  AFA+AQ A   + P  
Sbjct: 889  VVPAYYAVKEAIFPFAKLQGVDPILGPEMRSTGEVMGVGRSFAAAFARAQEAGDIRAPQP 948

Query: 1042 GTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAG 1101
            G  F+S+ D  K  +  +  A ++ GF +V+T+GT  +L+  G+A E V K+ EGRPH  
Sbjct: 949  GRAFVSVRDPDKKRVLPVVLALVERGFGVVATAGTYAWLQQNGVACEVVNKVAEGRPHIV 1008

Query: 1102 DMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALA 1149
            D++ NG+I  ++ T+ G +    D   +RR  L + V   TT++GA A
Sbjct: 1009 DLIKNGEIVYIINTTEGRAAIA-DSFSIRREALQHCVTYSTTIAGAKA 1055


>gi|170680299|ref|YP_001742150.1| carbamoyl phosphate synthase large subunit [Escherichia coli SMS-3-5]
 gi|170518017|gb|ACB16195.1| carbamoyl-phosphate synthase, large subunit [Escherichia coli
            SMS-3-5]
          Length = 1073

 Score = 1227 bits (3174), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 618/1071 (57%), Positives = 782/1071 (73%), Gaps = 19/1071 (1%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILILGAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  E+V +++EKERPDA+LPTMGGQTALN A+ L   G LE++GV +IGA  DA
Sbjct: 63   ATYIEPIHWEVVRKIIEKERPDAVLPTMGGQTALNCALELERQGVLEEFGVTMIGATADA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  F  AMK IG++T  SGI +T++E +++A E+G FP IIRP+FT+GG+GGGI
Sbjct: 123  IDKAEDRRRFDVAMKKIGLETARSGIAHTMEEALAVAAEVG-FPCIIRPSFTMGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEFE IC  GL  S T ++L+++SL+GWKEYE+EV+RD  DN +I+CSIEN D MG
Sbjct: 182  AYNREEFEEICARGLDLSPTKELLIDESLIGWKEYEMEVVRDKNDNCIIVCSIENFDAMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            +HTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGVE GGSNVQFAVNP +G ++VIEMN
Sbjct: 242  IHTGDSITVAPAQTLTDKEYQIMRNASMAVLREIGVETGGSNVQFAVNPKNGRLIVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT  +TPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGYTLDELMNDITGGRTPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            F FEKF G+   LTTQMKSVGE MA+GRT QES QKALR LE G +G+      +     
Sbjct: 362  FNFEKFAGANDRLTTQMKSVGEVMAIGRTQQESLQKALRGLEVGATGFDPKVSLDDPEAL 421

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
             +++  L+    +R+  I  A + G+ VD +  L+ ID+WFL Q +EL+ +E+ +    +
Sbjct: 422  TKIRRELKDAGAERIWYIADAFRAGLSVDGVFNLTNIDRWFLVQIEELVRLEEKVAEVGI 481

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
            + +  D   ++KR+GF+D ++A      E E+R+ R    + P YKRVDTCAAEF  +T 
Sbjct: 482  TGLNADFLRQLKRKGFADARLAKLAGVREAEIRKLRDQYDLHPVYKRVDTCAAEFATDTA 541

Query: 627  YMYSSYDFECESAP-TQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNS 685
            YMYS+Y+ ECE+ P T ++K+++LGGGPNRIGQGIEFDYCC H S +L+  GYETIM+N 
Sbjct: 542  YMYSTYEEECEANPSTDREKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVNC 601

Query: 686  NPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEH 745
            NPETVSTDYDTSDRLYFEP+T+EDVL ++ +E+P+G+IVQ+GGQTPLKL+          
Sbjct: 602  NPETVSTDYDTSDRLYFEPVTLEDVLEIVRIEKPKGVIVQYGGQTPLKLA---------- 651

Query: 746  RLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEI 805
            R   A+G   V + GTSPD+ID AEDRERF   ++ L ++QP      +   A+  AKEI
Sbjct: 652  RALEAAG---VPVIGTSPDAIDRAEDRERFQHAVERLKLKQPANATVTTIEMAVEKAKEI 708

Query: 806  GYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALA 865
            GYP+VVRPSYVLGGRAMEIVY +  L  Y + AV V  + PVL+D +L DA+E+DVDA+ 
Sbjct: 709  GYPLVVRPSYVLGGRAMEIVYDEADLRRYFQTAVSVSNDAPVLLDHFLDDAVEVDVDAIC 768

Query: 866  DSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMN 925
            D    V+IGGIMEHIEQAGVHSGDSAC +P  T+S    D +     KLA  L V GLMN
Sbjct: 769  DG-EMVLIGGIMEHIEQAGVHSGDSACSLPAYTLSQEIQDVMRQQVQKLAFELQVRGLMN 827

Query: 926  CQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPK 985
             Q+A+  + +VYL+E NPRA+RTVPFVSKA G PLAK AA VM+GK+L + G TKEVIP 
Sbjct: 828  VQFAVKNN-EVYLIEVNPRAARTVPFVSKATGVPLAKVAARVMAGKTLAEQGVTKEVIPP 886

Query: 986  HVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVF 1045
            + SVKE VLPF KF G D LLGPEMRSTGEVMG+  +F  AFAKAQ+ +   +   G   
Sbjct: 887  YYSVKEVVLPFNKFPGVDPLLGPEMRSTGEVMGVGRTFAEAFAKAQLGSNSTMKKHGRAL 946

Query: 1046 LSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVA 1105
            LS+ +  K  +  +A   L  GF++ +T GTA  L   GI    V K+HEGRPH  D + 
Sbjct: 947  LSVREGDKERVVDLAAKLLKQGFELDATHGTAIVLGEAGINPRLVNKVHEGRPHIQDRIK 1006

Query: 1106 NGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRS 1156
            NG+   ++ T+SG    + D   +RR  L YKV   TT++G  A A A+ +
Sbjct: 1007 NGEYTYIINTTSGRRAIE-DSRVIRRSALQYKVHYDTTLNGGFATAMALNA 1056


>gi|238911126|ref|ZP_04654963.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Tennessee str. CDC07-0191]
          Length = 1075

 Score = 1227 bits (3174), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 617/1078 (57%), Positives = 784/1078 (72%), Gaps = 19/1078 (1%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILILGAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  E+V +++EKERPDA+LPTMGGQTALN A+ L   G LE++GV +IGA  DA
Sbjct: 63   ATYIEPIHWEVVRKIIEKERPDAVLPTMGGQTALNCALELERQGVLEEFGVTMIGATADA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  F  AMK IG+ T  SGI +T++E +++A ++G FP IIRP+FT+GGTGGGI
Sbjct: 123  IDKAEDRRRFDIAMKKIGLDTARSGIAHTMEEALAVAADVG-FPCIIRPSFTMGGTGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEFE IC+ GL  S T+++L+++SL+GWKEYE+EV+RD  DN +I+CSIEN D MG
Sbjct: 182  AYNREEFEEICERGLDLSPTNELLIDESLIGWKEYEMEVVRDKNDNCIIVCSIENFDAMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            +HTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGVE GGSNVQFAVNP +G ++VIEMN
Sbjct: 242  IHTGDSITVAPAQTLTDKEYQIMRNASMAVLREIGVETGGSNVQFAVNPKNGRLIVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT  +TPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGYTLDELMNDITGGRTPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            F FEKF G+   LTTQMKSVGE MA+GRT QES QKALR LE G +G+      +     
Sbjct: 362  FNFEKFAGANDRLTTQMKSVGEVMAIGRTQQESLQKALRGLEVGATGFDPKVSLDDPEAL 421

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
             +++  L+    DR+  I  A + G+ VD +  L+ ID+WFL Q +EL+ +E+ +    +
Sbjct: 422  TKIRRELKDAGADRIWYIADAFRAGLSVDGVFNLTNIDRWFLVQIEELVRLEEKVAEVGI 481

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
            + +  D   ++KR+GF+D ++A      E E+R+ R    + P YKRVDTCAAEF  +T 
Sbjct: 482  TGLNADFLRQLKRKGFADARLAKLAGVREAEIRKLRDQYDLHPVYKRVDTCAAEFATDTA 541

Query: 627  YMYSSYDFECESAPT-QKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNS 685
            YMYS+Y+ ECE+ P+  + K+++LGGGPNRIGQGIEFDYCC H S +L+  GYETIM+N 
Sbjct: 542  YMYSTYEDECEANPSVDRDKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVNC 601

Query: 686  NPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEH 745
            NPETVSTDYDTSDRLYFEP+T+EDVL ++ +E+P+G+IVQ+GGQTPLKL+          
Sbjct: 602  NPETVSTDYDTSDRLYFEPVTLEDVLEIVRIEKPKGVIVQYGGQTPLKLA---------- 651

Query: 746  RLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEI 805
            R   A+G   V + GTSPD+ID AEDRERF   +  L ++QP      +   A+  AKEI
Sbjct: 652  RALEAAG---VPVIGTSPDAIDRAEDRERFQHAVDRLKLKQPANATVTAIEQAVEKAKEI 708

Query: 806  GYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALA 865
            GYP+VVRPSYVLGGRAMEIVY +  L  Y + AV V  + PVL+D++L DA+E+DVDA+ 
Sbjct: 709  GYPLVVRPSYVLGGRAMEIVYDEADLRRYFQTAVSVSNDAPVLLDRFLDDAVEVDVDAIC 768

Query: 866  DSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMN 925
            D    V+IGGIMEHIEQAGVHSGDSAC +P  T+S    D +     KLA  L V GLMN
Sbjct: 769  DG-EMVLIGGIMEHIEQAGVHSGDSACSLPAYTLSQEIQDVMRQQVQKLAFELQVRGLMN 827

Query: 926  CQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPK 985
             Q+A+  + +VYL+E NPRA+RTVPFVSKA G PLAK AA VM+GK+L + G TKE+IP 
Sbjct: 828  VQFAVKDN-EVYLIEVNPRAARTVPFVSKATGVPLAKVAARVMAGKTLTEQGVTKEIIPP 886

Query: 986  HVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVF 1045
            + SVKE VLPF KF G D LLGPEMRSTGEVMG+  +F  AFAKAQ+ +   +   G   
Sbjct: 887  YYSVKEVVLPFNKFPGVDPLLGPEMRSTGEVMGVGRTFAEAFAKAQLGSNSTMKKQGRAL 946

Query: 1046 LSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVA 1105
            LS+ +  K  +  +A   L  GF++ +T GTA  L   GI    V K+HEGRPH  D + 
Sbjct: 947  LSVREGDKERVVDLAAKLLKQGFELDATHGTAIVLGEAGINPRLVNKVHEGRPHIQDRIK 1006

Query: 1106 NGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTVT 1163
            NG+   ++ T++G    + D   +RR  L YKV   TT++G  A   A+ +  +  VT
Sbjct: 1007 NGEYTYIINTTAGRRAIE-DSRVIRRSALQYKVHYDTTLNGGFATTMALNADATEKVT 1063


>gi|432858337|ref|ZP_20084833.1| carbamoyl-phosphate synthase large chain [Escherichia coli KTE146]
 gi|431408580|gb|ELG91763.1| carbamoyl-phosphate synthase large chain [Escherichia coli KTE146]
          Length = 1072

 Score = 1227 bits (3174), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 616/1070 (57%), Positives = 780/1070 (72%), Gaps = 18/1070 (1%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILILGAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  E+V +++EKERPDA+LPTMGGQTALN A+ L   G LE++GV +IGA  DA
Sbjct: 63   ATYIEPIHWEVVRKIIEKERPDAVLPTMGGQTALNCALELERQGVLEEFGVTMIGATADA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  F  AMK IG++T  SGI +T++E +++A ++G FP IIRP+FT+GG+GGGI
Sbjct: 123  IDKAEDRRRFDVAMKKIGLETARSGIAHTMEEALAVAADVG-FPCIIRPSFTMGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEFE IC  GL  S T ++L+++SL+GWKEYE+EV+RD  DN +I+CSIEN D MG
Sbjct: 182  AYNREEFEEICARGLDLSPTKELLIDESLIGWKEYEMEVVRDKNDNCIIVCSIENFDAMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            +HTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGVE GGSNVQFAVNP +G ++VIEMN
Sbjct: 242  IHTGDSITVAPAQTLTDKEYQIMRNASMAVLREIGVETGGSNVQFAVNPKNGRLIVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT  +TPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGYTLDELMNDITGGRTPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            F FEKF G+   LTTQMKSVGE MA+GRT QES QKALR LE G +G+      +     
Sbjct: 362  FNFEKFAGANDRLTTQMKSVGEVMAIGRTQQESLQKALRGLEVGATGFDPKVSLDDPEAL 421

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
             +++  L+    +R+  I  A + G+ VD +  L+ ID+WFL Q +EL+ +E+ +    +
Sbjct: 422  TKIRRELKDAGAERIWYIADAFRAGLSVDGVFNLTNIDRWFLVQIEELVRLEEKVAEVGI 481

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
            + +  D   ++KR+GF+D ++A      E E+R+ R    + P YKRVDTCAAEF  +T 
Sbjct: 482  TGLNADFLRQLKRKGFADARLAKLAGVREAEIRKLRDQYDLHPVYKRVDTCAAEFATDTA 541

Query: 627  YMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSN 686
            YMYS+Y+ ECES P+ + K+++LGGGPNRIGQGIEFDYCC H S +L+  G+ETIM+N N
Sbjct: 542  YMYSTYEEECESNPSDRDKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGFETIMVNCN 601

Query: 687  PETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHR 746
            PETVSTDYDTSDRLYFEP+T+EDVL ++ +E+P+G+IVQ+GGQTPLKL+          R
Sbjct: 602  PETVSTDYDTSDRLYFEPVTLEDVLEIVRIEKPKGVIVQYGGQTPLKLA----------R 651

Query: 747  LPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEIG 806
               A+G   V + GTSPD+ID AEDRERF   +  L ++QP      +   A+  AKEIG
Sbjct: 652  ALEAAG---VPVIGTSPDAIDRAEDRERFQHAVDRLKLKQPANATVTAIEMAVEKAKEIG 708

Query: 807  YPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALAD 866
            YP+VVRPSYVLGGRAMEIVY +  L  Y + AV V  + PVL+D +L DA+E+DVDA+ D
Sbjct: 709  YPLVVRPSYVLGGRAMEIVYDEADLRRYFQTAVSVSNDAPVLLDHFLDDAVEVDVDAICD 768

Query: 867  SCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNC 926
                V+IGGIMEHIEQAGVHSGDSAC +P  T+S    D +     KLA  L V GLMN 
Sbjct: 769  G-EMVLIGGIMEHIEQAGVHSGDSACSLPAYTLSQEIQDVMRQQVQKLAFELQVRGLMNV 827

Query: 927  QYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPKH 986
            Q+A+  + +VYL+E NPRA+RTVPFVSKA G PLAK AA VM+GK+L + G TKEVIP +
Sbjct: 828  QFAVKNN-EVYLIEVNPRAARTVPFVSKATGVPLAKVAARVMAGKTLAEQGVTKEVIPPY 886

Query: 987  VSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVFL 1046
             SVKE VLPF KF G D LLGPEMRSTGEVMG+  +F  AFAKAQ+ +   +   G   L
Sbjct: 887  YSVKEVVLPFNKFPGVDPLLGPEMRSTGEVMGVGRTFAEAFAKAQLGSNSTMKKHGRALL 946

Query: 1047 SLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVAN 1106
            S+ +  K  +  +A   L  GF++ +T GTA  L   GI    V K+HEGRPH  D + N
Sbjct: 947  SVREGDKERVVDLAAKLLKQGFELDATHGTAIVLGEAGINPRLVNKVHEGRPHIQDRIKN 1006

Query: 1107 GQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRS 1156
            G+   ++ T+SG    + D   +RR  L YKV   TT++G  A A A+ +
Sbjct: 1007 GEYTYIINTTSGRRAIE-DSRVIRRSALQYKVHYDTTLNGGFATAMALNA 1055


>gi|162139870|ref|YP_746109.2| carbamoyl phosphate synthase large subunit [Granulibacter
            bethesdensis CGDNIH1]
          Length = 1092

 Score = 1227 bits (3174), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 627/1110 (56%), Positives = 798/1110 (71%), Gaps = 50/1110 (4%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD+R ILI+GAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP LAD
Sbjct: 3    KRTDIRSILIVGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPDLAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+TP++VE+++ KE+PDA+LPTMGGQTALN A+ L  SGALE++GVELIGAK D 
Sbjct: 63   ATYIEPITPDVVERIIAKEKPDAILPTMGGQTALNTAMQLHASGALERHGVELIGAKADV 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I +AEDR  F+ AM  IG+++P S I +TL+E       +G  P +IRP+FTLGGTGGGI
Sbjct: 123  IDRAEDRLKFRDAMDEIGIESPRSVIAHTLEEAREGLAHVG-LPAVIRPSFTLGGTGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYNKEEFE I  +GL AS T++VL+E+S+LGWKEYE+EV+RD ADN +IICSIEN+DPMG
Sbjct: 182  AYNKEEFEQIVTSGLDASPTTEVLIEESVLGWKEYEMEVVRDSADNCIIICSIENIDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDS+TVAPA TLTD+EYQR+RD SIA +R+IGV+ GGSNVQF VNP DG ++VIEMN
Sbjct: 242  VHTGDSVTVAPALTLTDREYQRMRDASIACLRKIGVDTGGSNVQFGVNPADGRMVVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITK--------KTPASFEPSIDY 439
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDITK         TPASFEP+IDY
Sbjct: 302  PRVSRSSALASKATGFPIAKIAAKLAVGYTLDELANDITKMEIDGQLRTTPASFEPTIDY 361

Query: 440  VVTKIPRFAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNV 499
            VV K+PRF FEKFPG+  LL+T MKSVGEAMA+GR F E+ QKA RS+E G +G     +
Sbjct: 362  VVVKMPRFTFEKFPGTPALLSTSMKSVGEAMAIGRNFSEALQKAFRSMETGLNG-----L 416

Query: 500  KELDWDWE---QLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELID 556
             ++  D E     + +L  P PDR+     A++ G+ V++++     D WFL + ++++ 
Sbjct: 417  DDITLDGEGPDAFRAALSTPRPDRILVAAQALRHGLSVEDVNAACKFDPWFLREIQKIVT 476

Query: 557  VEQFLLTQSVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDT 616
             E  +    +   T+     +K  GFSD ++A  T  TE ++   R  LGV+P YKR+DT
Sbjct: 477  TEAHIRAHGLPENTR-SLRALKALGFSDARLAVLTGKTEADILAHREKLGVMPVYKRIDT 535

Query: 617  CAAEFEANTPYMYSSYDF-----ECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSF 671
            CA EF + T YMY +Y+       CES PT +KK++ILGGGPNRIGQGIEFDYCC H ++
Sbjct: 536  CAGEFASATSYMYGTYEGGFGAPSCESNPTDRKKIVILGGGPNRIGQGIEFDYCCVHAAY 595

Query: 672  SLQSAGYETIMMNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGI----IVQFG 727
            +L+ AG+ETIM+N NPETVSTDYDTSDRLYFEPLT EDV+N+I  E+  G     IVQ+G
Sbjct: 596  ALREAGFETIMVNCNPETVSTDYDTSDRLYFEPLTAEDVINLIRREQQSGTVLGCIVQYG 655

Query: 728  GQTPLKLSLPIHQYLDEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQP 787
            GQTPLKLS         H L  A     + I GTS D+IDAAEDRERF A++  LS+ QP
Sbjct: 656  GQTPLKLS---------HALSRAG----IPILGTSVDAIDAAEDRERFQALLNGLSLLQP 702

Query: 788  KGGIAKSEADALAIAKEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPV 847
            + GIA+S  +A AI   IGYPVV+RPSYVLGGRAMEIVY    L  Y+  AV V  + PV
Sbjct: 703  ENGIARSAQEAEAITARIGYPVVIRPSYVLGGRAMEIVYDHAGLNRYMREAVRVSGDNPV 762

Query: 848  LIDKYLSDAIEIDVDALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTI 907
            LID+YL+DAIE+DVD +AD    V + G+MEHIE+AG+HSGDSAC +P  ++S + +D +
Sbjct: 763  LIDRYLNDAIEVDVDCIADG-ERVYVAGVMEHIEEAGIHSGDSACSLPPYSLSPALVDEL 821

Query: 908  SSWTIKLAKRLNVCGLMNCQYAITTSGD----VYLLEANPRASRTVPFVSKAIGHPLAKY 963
             + T  LA+ L V GLMN Q+AI    D    +Y+LE NPRASRTVPFV+KA G  +AK 
Sbjct: 822  RAQTEALARGLQVIGLMNVQFAIKREADGSDRIYVLEVNPRASRTVPFVAKATGVAVAKI 881

Query: 964  AALVMSGKSLN--DLGFTKEVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDM 1021
             A VM+G  L   DLG T  +   HV+VKEAV PF +    D +LGPEM+STGEVMG+D 
Sbjct: 882  GARVMAGARLTEFDLGPTPRL--PHVAVKEAVFPFARLANVDTILGPEMKSTGEVMGLDT 939

Query: 1022 SFPIAFAKAQIAAGQKLPLSGTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLE 1081
            SF  AFAK+Q+ AG KLP SG VFLS+ D  K  L  +A+  +++GF++ +T GTA  L+
Sbjct: 940  SFERAFAKSQLGAGVKLPDSGRVFLSVRDTDKTALLPVARKLVELGFRLAATRGTAARLQ 999

Query: 1082 LKGIAVERVLKMHEGRPHAGDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVI 1141
              G+ V+ + K+ EGRPH  D + +G IQ+++ T+SG +    D   +RR  L + VP  
Sbjct: 1000 EAGLEVKVLNKVLEGRPHCVDAIRSGDIQLIINTNSG-AQSVSDSFDIRRSALTHGVPNY 1058

Query: 1142 TTVSGALANAEAIRSLKSNTVTMTALQDFF 1171
            TT++GA A   AI +L+  T+ +  LQ +F
Sbjct: 1059 TTMAGARAAVHAIAALREGTLEVAPLQSYF 1088


>gi|422350575|ref|ZP_16431459.1| carbamoyl-phosphate synthase large chain [Sutterella wadsworthensis
            2_1_59BFAA]
 gi|404657178|gb|EKB30081.1| carbamoyl-phosphate synthase large chain [Sutterella wadsworthensis
            2_1_59BFAA]
          Length = 1074

 Score = 1227 bits (3174), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 618/1080 (57%), Positives = 802/1080 (74%), Gaps = 25/1080 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ +LI+GAGPI+IGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP  AD
Sbjct: 3    KRTDIKSVLIIGAGPIIIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPQTAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+T E+VE+++ KERPDA+LPTMGGQTALN A+ LA  G L+KY +ELIGAK DA
Sbjct: 63   VTYIEPITWEVVERIIAKERPDAILPTMGGQTALNCAMDLARHGVLDKYDIELIGAKPDA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR+ FK+AM  IG+++  SG+  +L E   +  + G FP +IRP+FTLGG+GGGI
Sbjct: 123  IDKAEDRERFKEAMDRIGLESARSGVAYSLREAKELQAKFG-FPTVIRPSFTLGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            A++ E F  IC+ GL  S T ++L+E+SLLGWKEYE+EV+RD ADN +I+CSIEN DPMG
Sbjct: 182  AHDMESFVEICERGLELSPTHELLIEESLLGWKEYEMEVVRDTADNCIIVCSIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTD+EYQR+RD SIAI+REIGV+ GGSNVQFAVNP  G ++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDREYQRMRDASIAILREIGVDTGGSNVQFAVNPETGRMIVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKK-TPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIA++AAKL+VGY+LD++ N+IT   TPASFEP+IDYVVTK+PR
Sbjct: 302  PRVSRSSALASKATGFPIARIAAKLAVGYTLDELRNEITGGLTPASFEPTIDYVVTKVPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            FAFEKFP +   LTTQMKSVGE MA+GRTFQES QKALR LE G +G     + E     
Sbjct: 362  FAFEKFPAANDRLTTQMKSVGEVMAIGRTFQESLQKALRGLETGHNG-----LNETGVGI 416

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
            EQL++ + VP P+R+  +   ++ GM  +E+HELS ID WFL Q +E+++ E  L    +
Sbjct: 417  EQLRHEIAVPGPERIFFLADGIRAGMTDEELHELSAIDPWFLNQVREIVETEDKLRGNPL 476

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
            S  TK D   +KR+GFSD ++A  T + E EVR  RL++G+ P YKRVDTCAAEF  NT 
Sbjct: 477  SAFTKSDMLFLKRKGFSDGRLAQLTGAKEAEVRAARLAMGIRPVYKRVDTCAAEFATNTA 536

Query: 627  YMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSN 686
            Y+YS+Y+ ECE+ PT ++KV++LGGGPNRIGQGIEFDYCC H S +L++ G+ETIM+N N
Sbjct: 537  YLYSTYEEECEAEPTDRRKVMVLGGGPNRIGQGIEFDYCCVHASKALRADGWETIMVNCN 596

Query: 687  PETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHR 746
            PETVSTD+DTSDRLYFEP+T+EDVL + ++E+P G+IVQ+GGQTPLKL           R
Sbjct: 597  PETVSTDFDTSDRLYFEPVTLEDVLAICEVEKPAGVIVQYGGQTPLKLC----------R 646

Query: 747  LPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEIG 806
               A+G   V I GT+PD+ID AEDRERF  ++++L++ QP    A++E DA+ +A EIG
Sbjct: 647  ALEAAG---VPIIGTTPDAIDCAEDRERFQHLLQKLNLRQPPNRTARTEEDAIRLAAEIG 703

Query: 807  YPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALAD 866
            YP+VVRPSYVLGGRAM+IV+T E L  Y++ AV V  E PVL+D++L DA+E+DVDA+AD
Sbjct: 704  YPLVVRPSYVLGGRAMDIVHTPEALQRYMKEAVSVSNESPVLLDRFLDDAVEMDVDAVAD 763

Query: 867  SCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNC 926
                V + G+MEHIEQAGVHSGDSAC +P  ++ +  ++ I   T  +A+ LNV GLMN 
Sbjct: 764  G-HEVQVAGVMEHIEQAGVHSGDSACSLPPYSLPAVVVEEIKRQTKLMAEALNVVGLMNV 822

Query: 927  QYAITTSGD----VYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEV 982
            Q+A+  +      +Y+LE NPRASRTVPFVSKA G+P+A  AA VM+G++L + G   EV
Sbjct: 823  QFAVQHAHSENPVIYVLEVNPRASRTVPFVSKATGNPVAAIAARVMAGQTLAEQGVNLEV 882

Query: 983  IPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSG 1042
             P++VSVKEAV PF KF G D +LGPEMRSTGEVMG+   F  A  K+Q+AAG +LP  G
Sbjct: 883  TPRYVSVKEAVFPFSKFLGVDPVLGPEMRSTGEVMGVGRDFGEALFKSQLAAGSRLPERG 942

Query: 1043 TVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGD 1102
            +VF+S+ +  KP     A      GF +V+T+GTAH ++  GI    V ++ +       
Sbjct: 943  SVFISVRECDKPKAVVCAHQLHQAGFPLVATAGTAHVIQQAGIPCRTVGRIGDAAGDVIG 1002

Query: 1103 MVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTV 1162
            M+  G I +++++ +    +  D   +R+  LA ++   TT++G LA +E IR ++S  V
Sbjct: 1003 MMEAGDITLVIMSVAEHEGELNDARAIRKLALAKQITYYTTMAGGLAASEGIRHMRSVQV 1062


>gi|417346103|ref|ZP_12126055.1| Carbamoyl-phosphate synthase large chain [Salmonella enterica subsp.
            enterica serovar Gaminara str. A4-567]
 gi|353580720|gb|EHC41878.1| Carbamoyl-phosphate synthase large chain [Salmonella enterica subsp.
            enterica serovar Gaminara str. A4-567]
          Length = 1075

 Score = 1227 bits (3174), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 616/1078 (57%), Positives = 784/1078 (72%), Gaps = 19/1078 (1%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILILGAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  E+V +++EKERPDA+LPTMGGQTALN A+ L   G LE++GV +IGA  DA
Sbjct: 63   ATYIEPIHWEVVRKIIEKERPDAVLPTMGGQTALNCALELERQGVLEEFGVTMIGATADA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  F  AMK IG+ T  SGI +T++E +++A ++G FP IIRP+FT+GGTGGGI
Sbjct: 123  IDKAEDRRRFDIAMKKIGLDTARSGIAHTMEEALAVAADVG-FPCIIRPSFTMGGTGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEFE IC+ GL  S T+++L+++SL+GWKEYE+EV+RD  DN +I+CSIEN D MG
Sbjct: 182  AYNREEFEEICERGLDLSPTNELLIDESLIGWKEYEMEVVRDKNDNCIIVCSIENFDAMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            +HTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGVE GGSNVQFAVNP +G ++VIEMN
Sbjct: 242  IHTGDSITVAPAQTLTDKEYQIMRNASMAVLREIGVETGGSNVQFAVNPKNGRLIVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT  +TPASFEPSIDY+VTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGYTLDELMNDITGGRTPASFEPSIDYIVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            F FEKF G+   LTTQMKSVGE MA+GRT QES QKALR LE G +G+      +     
Sbjct: 362  FNFEKFAGANDRLTTQMKSVGEVMAIGRTQQESLQKALRGLEVGATGFDPKVSLDDPEAL 421

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
             +++  L+    DR+  I  A + G+ VD +  L+ ID+WFL Q +EL+ +E+ +    +
Sbjct: 422  TKIRRELKDAGADRIWYIADAFRAGLSVDGVFNLTNIDRWFLVQIEELVRLEEKVAEVGI 481

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
            + +  D   ++KR+GF+D ++A      E E+R+ R    + P YKRVDTCAAEF  +T 
Sbjct: 482  TGLNADFLRQLKRKGFADARLAKLAGVREAEIRKLRDQYDLHPVYKRVDTCAAEFATDTA 541

Query: 627  YMYSSYDFECESAPT-QKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNS 685
            YMYS+Y+ ECE+ P+  + K+++LGGGPNRIGQGIEFDYCC H S +L+  GYETIM+N 
Sbjct: 542  YMYSTYEDECEANPSVDRDKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVNC 601

Query: 686  NPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEH 745
            NPETVSTDYDTSDRLYFEP+T+EDVL ++ +E+P+G+IVQ+GGQTPLKL+          
Sbjct: 602  NPETVSTDYDTSDRLYFEPVTLEDVLEIVRIEKPKGVIVQYGGQTPLKLA---------- 651

Query: 746  RLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEI 805
            R   A+G   V + GTSPD+ID AEDRERF   +  L ++QP      +   A+  AKEI
Sbjct: 652  RALEAAG---VPVIGTSPDAIDRAEDRERFQHAVDRLKLKQPANATVTAIEQAVEKAKEI 708

Query: 806  GYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALA 865
            GYP+VVRPSYVLGGRAMEIVY +  L  Y + AV V  + PVL+D++L DA+E+DVDA+ 
Sbjct: 709  GYPLVVRPSYVLGGRAMEIVYDEADLRRYFQTAVSVSNDAPVLLDRFLDDAVEVDVDAIC 768

Query: 866  DSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMN 925
            D    V+IGGIMEHIEQAGVHSGDSAC +P  T+S    D +     KLA  L V GLMN
Sbjct: 769  DG-EMVLIGGIMEHIEQAGVHSGDSACSLPAYTLSQEIQDVMRQQVQKLAFELQVRGLMN 827

Query: 926  CQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPK 985
             Q+A+  + +VYL+E NPRA+RTVPFVSKA G PLAK AA VM+GKSL + G T+E+IP 
Sbjct: 828  VQFAVKDN-EVYLIEVNPRAARTVPFVSKATGVPLAKVAARVMAGKSLTEQGVTQEIIPP 886

Query: 986  HVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVF 1045
            + SVKE VLPF KF G D LLGPEMRSTGEVMG+  +F  AFAKAQ+ +   +   G   
Sbjct: 887  YYSVKEVVLPFNKFPGVDPLLGPEMRSTGEVMGVGRTFAEAFAKAQLGSNSTMKKQGRAL 946

Query: 1046 LSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVA 1105
            LS+ +  K  +  +A   L  GF++ +T GTA  L   GI    V K+HEGRPH  D + 
Sbjct: 947  LSVREGDKERVVDLAAKLLKQGFELDATHGTAIVLGEAGINPRLVNKVHEGRPHIQDRIK 1006

Query: 1106 NGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTVT 1163
            NG+   ++ T++G    + D   +RR  L YKV   TT++G  A   A+ +  +  VT
Sbjct: 1007 NGEYTYIINTTAGRRAIE-DSRVIRRSALQYKVHYDTTLNGGFATTMALNADATEKVT 1063


>gi|260767327|ref|ZP_05876266.1| carbamoyl-phosphate synthase large chain [Vibrio furnissii CIP
            102972]
 gi|375131945|ref|YP_004994045.1| carbamoyl phosphate synthase large subunit [Vibrio furnissii NCTC
            11218]
 gi|260617650|gb|EEX42830.1| carbamoyl-phosphate synthase large chain [Vibrio furnissii CIP
            102972]
 gi|315181119|gb|ADT88033.1| carbamoyl phosphate synthase large subunit [Vibrio furnissii NCTC
            11218]
          Length = 1076

 Score = 1227 bits (3174), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 614/1065 (57%), Positives = 778/1065 (73%), Gaps = 22/1065 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILILGAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  E+V +++EKERPDA+LPTMGGQTALN A+AL + G L ++GVE+IGA  DA
Sbjct: 63   ATYIEPIHWEVVRKIIEKERPDAVLPTMGGQTALNCALALEKHGVLAEFGVEMIGATADA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  F +AMK+IG+  P +    T++E   + + +G FP IIRP+FT+GGTGGGI
Sbjct: 123  IDKAEDRSRFDKAMKSIGLACPRADTAKTMEEAYRVLDMVG-FPCIIRPSFTMGGTGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYNKEEFE IC+ GL  S T+++L+++SL+GWKEYE+EV+RD ADN +I+C+IEN DPMG
Sbjct: 182  AYNKEEFEEICRRGLDLSPTNELLIDESLIGWKEYEMEVVRDKADNCIIVCAIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            +HTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGVE GGSNVQF +NP DG +++IEMN
Sbjct: 242  IHTGDSITVAPAQTLTDKEYQLMRNASLAVLREIGVETGGSNVQFGINPKDGRMVIIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VG++LD++ NDIT   TPASFEP+IDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGFTLDELMNDITGGATPASFEPTIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWD- 505
            F FEKF G+   LTTQMKSVGE MA+GR  QES QKALR LE G +G+    + +LD   
Sbjct: 362  FNFEKFAGANNRLTTQMKSVGEVMAIGRNQQESLQKALRGLEVGATGF--DEMVDLDAPD 419

Query: 506  -WEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQ 564
               +++Y L+    +R+  I  A + GM +D I  L+ ID+WFL Q +EL+ +E+ +   
Sbjct: 420  ALTKIRYELKEAGAERIWYIADAFRAGMSIDGIFNLTNIDRWFLVQIEELVKMEEQVKLG 479

Query: 565  SVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEAN 624
              + + ++    +KR+GFSD +++     +E E+R  R    + P YKRVDTCAAEF ++
Sbjct: 480  GFAGLNENVLRAMKRKGFSDARLSKLLGVSESEIRRLRDQFNIHPVYKRVDTCAAEFSSD 539

Query: 625  TPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMN 684
            T YMYSSYD ECE+ PT K K+++LGGGPNRIGQGIEFDYCC H S +L+  GYETIM+N
Sbjct: 540  TAYMYSSYDDECEANPTDKDKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVN 599

Query: 685  SNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDE 744
             NPETVSTDYDTSDRLYFEP+T+EDVL+++ +E+P+G+IVQ+GGQTPLKL+         
Sbjct: 600  CNPETVSTDYDTSDRLYFEPVTLEDVLSIVRVEKPKGVIVQYGGQTPLKLA--------- 650

Query: 745  HRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKE 804
             R   A+G   V I GTSPD+ID AEDRERF   +  L + QP+     +   A+  ++E
Sbjct: 651  -RALEAAG---VPIIGTSPDAIDRAEDRERFQQAVDRLGLLQPQNATVTAIEQAIEKSRE 706

Query: 805  IGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDAL 864
            IG+P+VVRPSYVLGGRAMEIVY +  L  Y   AV V  E PVL+D++L DA E+DVDA+
Sbjct: 707  IGFPLVVRPSYVLGGRAMEIVYDESDLRRYFNEAVSVSNESPVLLDRFLDDATEVDVDAI 766

Query: 865  ADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLM 924
             D    VVIGGIMEHIEQAGVHSGDSAC +P  T+S    D +     KLA  L V GLM
Sbjct: 767  CDG-ERVVIGGIMEHIEQAGVHSGDSACSLPAYTLSQEIQDKMREQVEKLAMELGVRGLM 825

Query: 925  NCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIP 984
            N Q+A+  + +VYL+E NPRA+RTVPFVSKA G PLAK AA VM+G++L   GFTKE+IP
Sbjct: 826  NTQFAVKDN-EVYLIEVNPRAARTVPFVSKATGAPLAKIAARVMAGQTLEQQGFTKEIIP 884

Query: 985  KHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTV 1044
             + SVKE VLPF KF G D LLGPEMRSTGEVMG+  +F  A+AKA++  G   P  G  
Sbjct: 885  PYYSVKEVVLPFNKFPGVDPLLGPEMRSTGEVMGVGATFAEAYAKAELGCGNVYPEGGRA 944

Query: 1045 FLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMV 1104
             LS+ +  K  +  +A   + +G+K+ +T GTA  L   GI    V K+HEGRPH  D +
Sbjct: 945  LLSVREGDKERVVDLASKLVKLGYKLDATHGTAVILGEAGINPRLVNKVHEGRPHILDRI 1004

Query: 1105 ANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALA 1149
             N +   +V T++G    + D   LRR  LA KV   TT++ A A
Sbjct: 1005 KNNEYTYIVNTAAGRQAIE-DSKVLRRGALAEKVNYTTTLNAAFA 1048



 Score =  261 bits (666), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 174/483 (36%), Positives = 266/483 (55%), Gaps = 37/483 (7%)

Query: 67  KIDS-SAELSNGAA----SSKDQKLGKRTDLRKILILGAGPIVIGQACEFDYSGTQACKA 121
           ++D+ +AE S+  A    S  D+     TD  KI++LG GP  IGQ  EFDY    A  A
Sbjct: 528 RVDTCAAEFSSDTAYMYSSYDDECEANPTDKDKIMVLGGGPNRIGQGIEFDYCCVHASLA 587

Query: 122 LKEEGYEVILINSNPATIMTDPGLADRTYITPMTPELVEQVLEKERPDALLPTMGGQTAL 181
           L+E+GYE I++N NP T+ TD   +DR Y  P+T E V  ++  E+P  ++   GGQT L
Sbjct: 588 LREDGYETIMVNCNPETVSTDYDTSDRLYFEPVTLEDVLSIVRVEKPKGVIVQYGGQTPL 647

Query: 182 NLAVALAESGALEKYGVELIGAKLDAIKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECI 241
            LA       ALE  GV +IG   DAI +AEDR+ F+QA+  +G+  P +     +++ I
Sbjct: 648 KLA------RALEAAGVPIIGTSPDAIDRAEDRERFQQAVDRLGLLQPQNATVTAIEQAI 701

Query: 242 SIANEIGEFPLIIRPAFTLGGTGGGIAYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKE 301
             + EIG FPL++RP++ LGG    I Y++ +        ++ S  S VL+++ L    E
Sbjct: 702 EKSREIG-FPLVVRPSYVLGGRAMEIVYDESDLRRYFNEAVSVSNESPVLLDRFLDDATE 760

Query: 302 YELEVMRDLADNVVIICSIENVDPMGVHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREI 361
            +++ + D  + VVI   +E+++  GVH+GDS    PA TL+ +   ++R+    +  E+
Sbjct: 761 VDVDAICD-GERVVIGGIMEHIEQAGVHSGDSACSLPAYTLSQEIQDKMREQVEKLAMEL 819

Query: 362 GVECGGSNVQFAVNPVDGEVMVIEMNPRVSRSSALASKATGFPIAKMAAKLSVGYSLDQI 421
           GV  G  N QFAV   D EV +IE+NPR +R+    SKATG P+AK+AA++  G +L+Q 
Sbjct: 820 GVR-GLMNTQFAVK--DNEVYLIEVNPRAARTVPFVSKATGAPLAKIAARVMAGQTLEQ- 875

Query: 422 PNDITKKTPASFEPSIDYVVTKIPRFAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQ 481
               TK+    +     Y V ++    F KFPG +PLL  +M+S GE M +G TF E++ 
Sbjct: 876 -QGFTKEIIPPY-----YSVKEVV-LPFNKFPGVDPLLGPEMRSTGEVMGVGATFAEAYA 928

Query: 482 KALRSLECGFSGWGCSNVKELDWDWEQLKYSLRVPNPDRMQAIYAAMKK-GMKVDEIHEL 540
           KA           GC NV     +  +   S+R  + +R+  + + + K G K+D  H  
Sbjct: 929 KA---------ELGCGNVYP---EGGRALLSVREGDKERVVDLASKLVKLGYKLDATHGT 976

Query: 541 SFI 543
           + I
Sbjct: 977 AVI 979


>gi|269103419|ref|ZP_06156116.1| carbamoyl-phosphate synthase large chain [Photobacterium damselae
            subsp. damselae CIP 102761]
 gi|268163317|gb|EEZ41813.1| carbamoyl-phosphate synthase large chain [Photobacterium damselae
            subsp. damselae CIP 102761]
          Length = 1074

 Score = 1227 bits (3174), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 616/1079 (57%), Positives = 781/1079 (72%), Gaps = 22/1079 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ +LILGAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIKSVLILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPNMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  E+V +++EKERPDA+LPTMGGQTALN A+ L   G L ++GVE+IGA  DA
Sbjct: 63   ATYIEPIHWEVVRKIIEKERPDAVLPTMGGQTALNCALDLERHGVLAEFGVEMIGATADA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  F  AMK+IG++ P +    T++E   + + +G FP IIRP+FT+GGTGGGI
Sbjct: 123  IDKAEDRSRFDAAMKSIGLECPRADTAKTMEEAYRVLDMVG-FPCIIRPSFTMGGTGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYNKEEFE IC+ GL  S T+++L+++SL+GWKEYE+EV+RD  DN +I+C+IEN DPMG
Sbjct: 182  AYNKEEFEEICRRGLDLSPTNELLIDESLIGWKEYEMEVVRDKNDNCIIVCAIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            +HTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGVE GGSNVQF +NP DG +++IEMN
Sbjct: 242  IHTGDSITVAPAQTLTDKEYQLMRNASLAVLREIGVETGGSNVQFGINPKDGRMVIIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL++GY+LD++ NDIT   TPASFEP+IDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAIGYTLDELMNDITGGATPASFEPTIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWD- 505
            F FEKF G+   LTTQMKSVGE MA+GR  QES QKALR LE G +G+    + +LD   
Sbjct: 362  FNFEKFAGANDRLTTQMKSVGEVMAIGRNQQESLQKALRGLEVGAAGF--DEMVDLDAPD 419

Query: 506  -WEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQ 564
               ++++ L+    +R+  I  A + GM VD +  L+ ID+WFL Q +E++ +E+ +   
Sbjct: 420  ALTKIRHELKDAGAERIWYIADAFRAGMSVDGVFNLTNIDRWFLVQIEEIVRLEEQVKAA 479

Query: 565  SVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEAN 624
              + +  D   ++KR+GF+D ++A      E E+R+ R    + P YKRVDTCAAEF ++
Sbjct: 480  GFAGLNADALRKLKRKGFADARLAKLLGVAESEIRKLRDQYNIHPVYKRVDTCAAEFSSD 539

Query: 625  TPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMN 684
            T YMYSSYD ECE+ PT ++K+++LGGGPNRIGQGIEFDYCC H S +L+  GYETIM+N
Sbjct: 540  TAYMYSSYDEECEANPTDREKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVN 599

Query: 685  SNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDE 744
             NPETVSTDYDTSDRLYFEP+T+EDVL +  +E+P+G+IVQ+GGQTPLKL+         
Sbjct: 600  CNPETVSTDYDTSDRLYFEPVTLEDVLAIARVEKPKGVIVQYGGQTPLKLA--------- 650

Query: 745  HRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKE 804
             R   A+G   V I GTSPD+ID AEDRERF   ++ L + QP+     +   A+  ++E
Sbjct: 651  -RALEAAG---VPIIGTSPDAIDRAEDRERFQQAVERLGLLQPENATVTTIEQAIEKSRE 706

Query: 805  IGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDAL 864
            IGYP+VVRPSYVLGGRAMEIVY +  L  Y   AV V  E PVL+D++L DA E+DVDA+
Sbjct: 707  IGYPLVVRPSYVLGGRAMEIVYDETDLRRYFNEAVSVSNESPVLLDRFLDDATEVDVDAI 766

Query: 865  ADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLM 924
             D    VVIGGIMEHIEQAGVHSGDSAC +P  T+S    D +     KLA  L V GLM
Sbjct: 767  CDG-ERVVIGGIMEHIEQAGVHSGDSACSLPAYTLSQEIQDVMRDQVEKLAFELGVRGLM 825

Query: 925  NCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIP 984
            N Q+A+  +  VYL+E NPRA+RTVPFVSKA G PLAK AA VM+G+SL   GFTKE+IP
Sbjct: 826  NTQFAVKNN-QVYLIEVNPRAARTVPFVSKATGAPLAKIAARVMAGQSLESQGFTKEIIP 884

Query: 985  KHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTV 1044
             + SVKE VLPF KF G D LLGPEMRSTGEVMGI  +F  AFAKA++  G++ P  G  
Sbjct: 885  PYYSVKEVVLPFNKFPGVDPLLGPEMRSTGEVMGIGNTFAEAFAKAELGCGKEYPEGGRA 944

Query: 1045 FLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMV 1104
             LS+ +  K  +  +A   + +G+++ +T GTA  L   GI    V K+HEGRPH  D +
Sbjct: 945  LLSVREGDKQRVVDLASKLIKLGYQLDATHGTAVILGEAGINPRLVNKVHEGRPHILDRI 1004

Query: 1105 ANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTVT 1163
             N +   ++ T+ G    + D   LRR  LA KV   TT++ A A   A  +   NTVT
Sbjct: 1005 KNNEYTYIINTAEGRQAIE-DSKVLRRGALAEKVNYTTTLNAAFAACMAHTADDRNTVT 1062



 Score =  258 bits (658), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 165/429 (38%), Positives = 246/429 (57%), Gaps = 26/429 (6%)

Query: 67  KIDS-SAELSNGAA---SSKDQKL-GKRTDLRKILILGAGPIVIGQACEFDYSGTQACKA 121
           ++D+ +AE S+  A   SS D++     TD  KI++LG GP  IGQ  EFDY    A  A
Sbjct: 528 RVDTCAAEFSSDTAYMYSSYDEECEANPTDREKIMVLGGGPNRIGQGIEFDYCCVHASLA 587

Query: 122 LKEEGYEVILINSNPATIMTDPGLADRTYITPMTPELVEQVLEKERPDALLPTMGGQTAL 181
           L+E+GYE I++N NP T+ TD   +DR Y  P+T E V  +   E+P  ++   GGQT L
Sbjct: 588 LREDGYETIMVNCNPETVSTDYDTSDRLYFEPVTLEDVLAIARVEKPKGVIVQYGGQTPL 647

Query: 182 NLAVALAESGALEKYGVELIGAKLDAIKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECI 241
            LA       ALE  GV +IG   DAI +AEDR+ F+QA++ +G+  P +    T+++ I
Sbjct: 648 KLA------RALEAAGVPIIGTSPDAIDRAEDRERFQQAVERLGLLQPENATVTTIEQAI 701

Query: 242 SIANEIGEFPLIIRPAFTLGGTGGGIAYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKE 301
             + EIG +PL++RP++ LGG    I Y++ +        ++ S  S VL+++ L    E
Sbjct: 702 EKSREIG-YPLVVRPSYVLGGRAMEIVYDETDLRRYFNEAVSVSNESPVLLDRFLDDATE 760

Query: 302 YELEVMRDLADNVVIICSIENVDPMGVHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREI 361
            +++ + D  + VVI   +E+++  GVH+GDS    PA TL+ +    +RD    +  E+
Sbjct: 761 VDVDAICD-GERVVIGGIMEHIEQAGVHSGDSACSLPAYTLSQEIQDVMRDQVEKLAFEL 819

Query: 362 GVECGGSNVQFAVNPVDGEVMVIEMNPRVSRSSALASKATGFPIAKMAAKLSVGYSLDQI 421
           GV  G  N QFAV   + +V +IE+NPR +R+    SKATG P+AK+AA++  G SL+  
Sbjct: 820 GVR-GLMNTQFAVK--NNQVYLIEVNPRAARTVPFVSKATGAPLAKIAARVMAGQSLES- 875

Query: 422 PNDITKKTPASFEPSIDYVVTKIPRFAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQ 481
               TK+    +     Y V ++    F KFPG +PLL  +M+S GE M +G TF E+F 
Sbjct: 876 -QGFTKEIIPPY-----YSVKEVV-LPFNKFPGVDPLLGPEMRSTGEVMGIGNTFAEAFA 928

Query: 482 KALRSLECG 490
           KA   L CG
Sbjct: 929 KA--ELGCG 935


>gi|93005659|ref|YP_580096.1| carbamoyl-phosphate synthase large subunit [Psychrobacter
            cryohalolentis K5]
 gi|92393337|gb|ABE74612.1| carbamoyl-phosphate synthase large subunit [Psychrobacter
            cryohalolentis K5]
          Length = 1112

 Score = 1227 bits (3174), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 608/1073 (56%), Positives = 784/1073 (73%), Gaps = 29/1073 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILI+GAGPIVIGQACEFDYSG QACKALKEEGY VIL+NSNPATIMTDP +AD
Sbjct: 31   KRTDIKSILIIGAGPIVIGQACEFDYSGAQACKALKEEGYRVILVNSNPATIMTDPTMAD 90

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+T + VEQ++ KERPDA+LPTMGGQTALN A+ L + G L KY  ELIGA  D+
Sbjct: 91   ATYIEPITWQTVEQIIAKERPDAILPTMGGQTALNCALELDKHGVLTKYNCELIGATKDS 150

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I+ AEDR+LF +AMK IG++ P +    T++E  +   ++G +P IIRP+FT+GG+GGGI
Sbjct: 151  IEMAEDRNLFDKAMKRIGLECPRAETAETMEEAFATQEKMG-YPCIIRPSFTMGGSGGGI 209

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN++EF  IC+ G   S   Q+L+++SL+GWKEYE+EV+RD  DN +IIC+IEN DPMG
Sbjct: 210  AYNRDEFIEICERGFDLSPNHQLLIDESLIGWKEYEMEVVRDKNDNCIIICAIENFDPMG 269

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGVE GGSNVQF +NP  G ++VIEMN
Sbjct: 270  VHTGDSITVAPAQTLTDKEYQIMRNASLAVLREIGVETGGSNVQFGINPETGRMVVIEMN 329

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITK-KTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL++GY+LD++ NDIT  KTPASFEP++DYVVTKIPR
Sbjct: 330  PRVSRSSALASKATGFPIAKIAAKLAIGYTLDELQNDITGGKTPASFEPALDYVVTKIPR 389

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWG----CSNVKEL 502
            F FEKFP ++ +L+TQMKSVGE MA+GR FQES QKALR +E G  G+      S V  +
Sbjct: 390  FNFEKFPQADNVLSTQMKSVGEVMAIGRNFQESMQKALRGMETGNDGFDEQIDLSKVS-I 448

Query: 503  DWDWEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLL 562
            +    ++   L +P P+R+  I  A + GM VD++ +L+ ID WFL Q ++++  E  + 
Sbjct: 449  EKARSEITNRLTIPTPERIYYIADAFRIGMSVDDVFKLTKIDPWFLVQIEDIVKTEAQVK 508

Query: 563  TQSVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFE 622
                  +T+ +    KR+G SD ++A     ++K++R KR  L V P YKRVDTCAAEF 
Sbjct: 509  ALGFGGLTEHNLRGFKRKGLSDLRLAKLLGVSQKQLRTKRWDLNVYPVYKRVDTCAAEFA 568

Query: 623  ANTPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIM 682
             +T YMYS+YD ECE+ PT  KK++++GGGPNRIGQGIEFDYCC H + +++  GYETIM
Sbjct: 569  TSTAYMYSTYDSECEANPTDNKKIMVIGGGPNRIGQGIEFDYCCVHAALAMREDGYETIM 628

Query: 683  MNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYL 742
            +N NPETVSTDYDTSDRLYFEP+T+EDVL ++ +E P+G+IVQFGGQTPLKL+       
Sbjct: 629  VNCNPETVSTDYDTSDRLYFEPITLEDVLEIVRIENPDGVIVQFGGQTPLKLA------- 681

Query: 743  DEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIA 802
               R   A+G   V+I GTSPD+ID AEDRERF  +I++L++ QP   +A S  D L  A
Sbjct: 682  ---RALEAAG---VKIIGTSPDAIDRAEDRERFQHMIQQLNLVQPTNALATSLEDGLVKA 735

Query: 803  KEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVD 862
            K++GYP+VVRPSYVLGGRAMEIVY ++ L  YL  AV+   E PVL+D++L DAIE+DVD
Sbjct: 736  KDVGYPLVVRPSYVLGGRAMEIVYNEDELRHYLRTAVQASNEAPVLLDRFLDDAIEVDVD 795

Query: 863  ALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCG 922
             ++D   +VVIGGIM+HIEQAGVHSGDSAC +P  ++S    D + + T+ +AK L V G
Sbjct: 796  CVSDGT-DVVIGGIMQHIEQAGVHSGDSACSLPPYSLSDELCDVMRAQTVAMAKELGVVG 854

Query: 923  LMNCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEV 982
            LMN Q+A+     VY+LE NPRA+RTVPFVSK IG  LA+ AA  M+G SL D GFTKE+
Sbjct: 855  LMNVQFAVKGE-TVYILEVNPRAARTVPFVSKCIGTSLAQIAARCMAGTSLKDQGFTKEI 913

Query: 983  IPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLP--- 1039
            +P   +VKEAV PF KF G D +L PEM+STGEVMG+  +F  AF KA I + ++LP   
Sbjct: 914  VPAFFAVKEAVFPFAKFPGVDPILSPEMKSTGEVMGVGKTFGEAFYKAVIGSNERLPGLP 973

Query: 1040 ---LSGTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEG 1096
                + TVF+S+ D  K  +  IA+   D GF IV+T+GT   L   GI  +++ K+ EG
Sbjct: 974  TEGETKTVFISVRDSDKAQIAPIARQLTDFGFNIVATTGTQKVLSDNGIECKQINKVTEG 1033

Query: 1097 RPHAGDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALA 1149
            RPH  D + NG+I +++ T+ G    Q D   +RR  L  KV  +TT+  A A
Sbjct: 1034 RPHIVDALKNGKIDIIINTTEGKQA-QEDSFSIRRSALQGKVFYVTTLGAADA 1085


>gi|432668858|ref|ZP_19904414.1| carbamoyl-phosphate synthase large chain [Escherichia coli KTE119]
 gi|431214807|gb|ELF12557.1| carbamoyl-phosphate synthase large chain [Escherichia coli KTE119]
          Length = 1073

 Score = 1227 bits (3174), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 619/1071 (57%), Positives = 780/1071 (72%), Gaps = 19/1071 (1%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILILGAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  E+V +++EKERPDA+LPTMGGQTALN A+ L   G LE++GV +IGA  DA
Sbjct: 63   ATYIEPIHWEVVRKIIEKERPDAVLPTMGGQTALNCALELERQGVLEEFGVTMIGATADA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  F  AMK IG++T  SGI +T++E +++A ++G FP IIRP+FT+GG+GGGI
Sbjct: 123  IDKAEDRRRFDVAMKKIGLETARSGIAHTMEEALAVAADVG-FPCIIRPSFTMGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEFE IC  GL  S T ++L+++SL+GWKEYE+EV+RD  DN +I+CSIEN D MG
Sbjct: 182  AYNREEFEEICARGLDLSPTKELLIDESLIGWKEYEMEVVRDKNDNCIIVCSIENFDAMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            +HTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGVE GGSNVQFAVNP +G ++VIEMN
Sbjct: 242  IHTGDSITVAPAQTLTDKEYQIMRNASMAVLREIGVETGGSNVQFAVNPKNGRLIVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT  +TPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGYTLDELMNDITGGRTPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            F FEKF G+   LTTQMKSVGE MA+GRT QES QKALR LE G +G+      +     
Sbjct: 362  FNFEKFAGANDRLTTQMKSVGEVMAIGRTQQESLQKALRGLEVGATGFDPKVSLDDPEAL 421

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
             +++  L+    DR+  I  A + G+ VD +  L+ ID+WFL Q +EL+ +E+ +    +
Sbjct: 422  TKIRRELKDAGADRIWYIADAFRAGLSVDGVFNLTNIDRWFLVQIEELVRLEEKVAEVGI 481

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
            + +  D   ++KR+GF+D ++A      E E+R+ R    + P YKRVDTCAAEF  +T 
Sbjct: 482  TGLNADFLRQLKRKGFADARLAKLAGVREAEIRKLRDQYDLHPVYKRVDTCAAEFATDTA 541

Query: 627  YMYSSYDFECESAP-TQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNS 685
            YMYS+Y+ ECE+ P T ++K+++LGGGPNRIGQGIEFDYCC H S +L+  GYETIM+N 
Sbjct: 542  YMYSTYEEECEANPSTDREKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVNC 601

Query: 686  NPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEH 745
            NPETVSTDYDTSDRLYFEP+T+EDVL ++ +E+P+G+IVQ+GGQTPLKL+          
Sbjct: 602  NPETVSTDYDTSDRLYFEPVTLEDVLEIVRIEKPKGVIVQYGGQTPLKLA---------- 651

Query: 746  RLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEI 805
            R   A+G   V + GTSPD+ID AEDRERF   +  L ++QP      +   A+  AKEI
Sbjct: 652  RALEAAG---VPVIGTSPDAIDRAEDRERFQHAVDRLKLKQPANATVTAIEMAVEKAKEI 708

Query: 806  GYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALA 865
            GYP+VVRPSYVLGGRAMEIVY +  L  Y + AV V  + PVL+D +L DA+E+DVDA+ 
Sbjct: 709  GYPLVVRPSYVLGGRAMEIVYDEADLRRYFQTAVSVSNDAPVLLDHFLDDAVEVDVDAIC 768

Query: 866  DSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMN 925
            D    V+IGGIMEHIEQAGVHSGDSAC +P  T+S    D +     KLA  L V GLMN
Sbjct: 769  DG-EMVLIGGIMEHIEQAGVHSGDSACSLPAYTLSQEIQDVMRQQVQKLAFELQVRGLMN 827

Query: 926  CQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPK 985
             Q+A+  + +VYL+E NPRA+RTVPFVSKA G PLAK AA VM+GKSL + G TKEVIP 
Sbjct: 828  VQFAVKNN-EVYLIEVNPRAARTVPFVSKATGVPLAKVAARVMAGKSLAEQGVTKEVIPP 886

Query: 986  HVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVF 1045
            + SVKE VLPF KF G D LLGPEMRSTGEVMG+  +F  AFAKAQ+ +   +   G   
Sbjct: 887  YYSVKEVVLPFNKFPGVDPLLGPEMRSTGEVMGVGRTFAEAFAKAQLGSNSTMKKHGRAL 946

Query: 1046 LSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVA 1105
            LS+ +  K  +  +A   L  GF++ +T GTA  L   GI    V K+HEGRPH  D + 
Sbjct: 947  LSVREGDKERVVDLAAKLLKQGFELDATHGTAIVLGEAGINPRLVNKVHEGRPHIQDRIK 1006

Query: 1106 NGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRS 1156
            NG+   +  T+SG    + D   +RR  L YKV   TT++G  A A A+ +
Sbjct: 1007 NGEYTYITNTTSGRRAIE-DSRVIRRSALQYKVHYDTTLNGGFATAMALNA 1056


>gi|56460088|ref|YP_155369.1| carbamoyl phosphate synthase large subunit [Idiomarina loihiensis
            L2TR]
 gi|56179098|gb|AAV81820.1| Carbamoylphosphate synthase large subunit [Idiomarina loihiensis
            L2TR]
          Length = 1074

 Score = 1226 bits (3173), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 613/1067 (57%), Positives = 783/1067 (73%), Gaps = 18/1067 (1%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILILGAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  E+VE+++E+ERPDA+LPTMGGQTALN A+ L   G LE+Y VE+IGA  DA
Sbjct: 63   ATYIEPIHWEVVEKIIERERPDAVLPTMGGQTALNCALDLDRHGVLERYKVEMIGANADA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAE+RD F +AMK IG++TP + + ++LDE   + + +G FP IIRP+FT+GG+GGGI
Sbjct: 123  IDKAENRDRFDKAMKAIGLETPNAEMAHSLDEAFDVLSRLG-FPCIIRPSFTMGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEFE IC+ GL  S T+++L+++SLLGWKEYE+EV+RD +DN +I+C+IEN DPMG
Sbjct: 182  AYNREEFEEICRRGLDLSPTNELLIDESLLGWKEYEMEVVRDKSDNCIIVCTIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            +HTGDSITVAPAQTLTDKE+Q +RD ++A++REIGVE GGSNVQF VNP  G +++IEMN
Sbjct: 242  IHTGDSITVAPAQTLTDKEFQLMRDAAMAVLREIGVETGGSNVQFGVNPDTGRMVIIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ N+IT  KTPASFEP++DYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGYTLDELENEITGGKTPASFEPALDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            F FEKF      LTTQMKSVGE MA+GR FQES QKALR LE G SG+      E     
Sbjct: 362  FNFEKFANCNDRLTTQMKSVGEVMAIGRNFQESMQKALRGLELGASGFDPIVDLEAKDAR 421

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
             ++   L+ P  +R+  I  A + GM V E+ EL+ ID+W+L Q +EL+D+E+ +    +
Sbjct: 422  SKVIRELKEPGAERIWYIADAFRLGMTVREVFELTRIDEWYLIQIEELVDLEKEVDELGL 481

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
            + +T D    +KRRGF+D +IA     +E EVR+KR    + P YKRVDTCAAEF + T 
Sbjct: 482  AGLTADVMTVLKRRGFADSRIADVLHVSEAEVRKKRYKYKIHPVYKRVDTCAAEFASGTA 541

Query: 627  YMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSN 686
            YMYSSYD ECE+APT   K++++GGGPNRIGQGIEFDYCC H S +L+  GYETIM+N N
Sbjct: 542  YMYSSYDEECEAAPTDNDKIMVIGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVNCN 601

Query: 687  PETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHR 746
            PETVSTDYDTSDRLYFE +T+EDVL ++ +E+P+G+IVQ+GGQTPLKL+          R
Sbjct: 602  PETVSTDYDTSDRLYFESITLEDVLEIVRIEKPKGVIVQYGGQTPLKLA----------R 651

Query: 747  LPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEIG 806
               A+G   V I GTSPD+ID AEDR RF   ++ L ++QP+        +AL  AK IG
Sbjct: 652  ELEANG---VPIIGTSPDAIDRAEDRARFQTAVRRLGLKQPENSTVTGFNEALTEAKRIG 708

Query: 807  YPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALAD 866
            YP+VVRPSYVLGGRAMEIVY +  L  YL +AV+V  + PVL+D++L +AIE+DVDA+ D
Sbjct: 709  YPLVVRPSYVLGGRAMEIVYDEADLQRYLTDAVKVSNDAPVLLDRFLDNAIEVDVDAICD 768

Query: 867  SCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNC 926
               +V+IGGIM+HIE+AGVHSGDSAC +P  ++S      +     KLA  LNV GLMN 
Sbjct: 769  GT-DVLIGGIMQHIEEAGVHSGDSACSLPPYSLSDIIQAQLREQMRKLAFELNVNGLMNA 827

Query: 927  QYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPKH 986
            Q+A+    ++YL+E NPRA+RTVPFVSKA G PLAK AA VM G+SL + G+ KE+IP +
Sbjct: 828  QFAVKED-EIYLIEVNPRAARTVPFVSKATGVPLAKVAARVMVGQSLQEQGYVKEIIPPY 886

Query: 987  VSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVFL 1046
             SVKE V+PF KFQG D + GPEMRSTGEVMG+  SF  A+AKA + AG+ L   G   +
Sbjct: 887  YSVKEVVIPFAKFQGVDPIRGPEMRSTGEVMGVGESFEEAYAKANLGAGEALAKKGKALI 946

Query: 1047 SLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVAN 1106
            S+ D  K  L  +A+  L +GF + +T GTA  L  +GI    V K+ EGRP+  D + N
Sbjct: 947  SVKDSDKQRLMDLARGLLALGFSLEATRGTAKMLGEEGIDCSIVNKLQEGRPNIVDAIKN 1006

Query: 1107 GQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEA 1153
            G+   ++ T  G    + D + +RR  L  KV   TT++ A A  +A
Sbjct: 1007 GEYCYIINTVEGRQAIE-DSVYIRREALLNKVIYTTTLNAAFATVKA 1052


>gi|343492107|ref|ZP_08730480.1| carbamoyl phosphate synthase large subunit [Vibrio nigripulchritudo
            ATCC 27043]
 gi|342827447|gb|EGU61835.1| carbamoyl phosphate synthase large subunit [Vibrio nigripulchritudo
            ATCC 27043]
          Length = 1076

 Score = 1226 bits (3173), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 617/1087 (56%), Positives = 788/1087 (72%), Gaps = 27/1087 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTDL+ ILILGAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDLQSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  E+V +++EKERPDA+LPTMGGQTALN A+ L + G L ++GVE+IGA  DA
Sbjct: 63   ATYIEPIQWEVVRKIIEKERPDAVLPTMGGQTALNCALDLEKHGVLAEFGVEMIGATADA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  F +AMK+IG++ P +    T++E   + + +G FP IIRP+FT+GGTGGGI
Sbjct: 123  IDKAEDRSRFDKAMKSIGLECPRADTAKTMEEAYKVLDMVG-FPCIIRPSFTMGGTGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYNKEEFE IC+ GL  S T+++L+++SL+GWKEYE+EV+RD ADN +I+CSIEN DPMG
Sbjct: 182  AYNKEEFEEICRRGLDLSPTNELLIDESLIGWKEYEMEVVRDKADNCIIVCSIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            +HTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGVE GGSNVQF +NP DG +++IEMN
Sbjct: 242  IHTGDSITVAPAQTLTDKEYQLMRNASLAVLREIGVETGGSNVQFGINPKDGRMVIIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VG++LD++ NDIT   TPASFEP+IDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKIAAKLAVGFTLDELQNDITGGATPASFEPTIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWD- 505
            F FEKF G+   LTTQMKSVGE MA+GR  QES QKALR LE G +G+     + +D D 
Sbjct: 362  FNFEKFAGANDRLTTQMKSVGEVMAIGRNQQESLQKALRGLEVGVNGFD----EMVDLDS 417

Query: 506  ---WEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLL 562
                 ++++ L+    +R+  +  A + G+ VD +  L+ ID+WFL Q +EL+++E  + 
Sbjct: 418  PDALSKIRHELKEAGAERIWYVADAFRAGLSVDGVFNLTQIDRWFLVQIEELVNLENEVK 477

Query: 563  TQSVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFE 622
                + +T++   ++KR+GFSD +++     +E E+R  R    + P YKRVDTCAAEF 
Sbjct: 478  AGGFAGLTQEVLSKMKRKGFSDARLSTLLGVSESEIRRLRDQYDIHPVYKRVDTCAAEFS 537

Query: 623  ANTPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIM 682
            ++T YMYSSYD ECE+ PT K K+++LGGGPNRIGQGIEFDYCC H S +L+  GYETIM
Sbjct: 538  SDTAYMYSSYDDECEAQPTDKDKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIM 597

Query: 683  MNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYL 742
            +N NPETVSTDYDTSDRLYFEP+T+EDVL+++ +E+P+G+IVQ+GGQTPLKL+       
Sbjct: 598  VNCNPETVSTDYDTSDRLYFEPVTLEDVLSIVRVEKPKGVIVQYGGQTPLKLA------- 650

Query: 743  DEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIA 802
               R   A+G   V I GTSPD+ID AEDRERF A +  L + QP+     +   A+  +
Sbjct: 651  ---RALEAAG---VPIIGTSPDAIDRAEDRERFQAAVDRLGLLQPENATVTTIDQAVEKS 704

Query: 803  KEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVD 862
            KEIG+P+VVRPSYVLGGRAMEIVY ++ L  Y   AV V  E PVL+D++L DA E+D+D
Sbjct: 705  KEIGFPLVVRPSYVLGGRAMEIVYDEQDLRRYFNEAVSVSNESPVLLDRFLDDATEVDID 764

Query: 863  ALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCG 922
            A+ D    VVIGGIMEHIEQAGVHSGDSAC +P  T+S    D +     KLA  L V G
Sbjct: 765  AICDG-ERVVIGGIMEHIEQAGVHSGDSACSLPAYTLSQEIQDKMREQVEKLAFELGVRG 823

Query: 923  LMNCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEV 982
            LMN Q+A+  + +VYL+E NPRA+RTVPFVSKA G PLAK AA VM+G+SL   GFTKE+
Sbjct: 824  LMNTQFAVKDN-EVYLIEVNPRAARTVPFVSKATGAPLAKIAARVMAGQSLESQGFTKEI 882

Query: 983  IPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSG 1042
            IP + SVKE VLPF KF G D LLGPEMRSTGEVMG+  +F  A++KA++  G   P  G
Sbjct: 883  IPPYYSVKEVVLPFNKFPGVDPLLGPEMRSTGEVMGVGATFAEAYSKAELGCGNVYPEGG 942

Query: 1043 TVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGD 1102
               LS+ +  K  +  +A     +G+++ +T GTA  L   GI    V K+HEGRPH  D
Sbjct: 943  RALLSVREGDKQRVVDLASKLTKLGYQLDATHGTAVILGEAGINPRLVNKVHEGRPHILD 1002

Query: 1103 MVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEA-IRSLKSNT 1161
             + N +   +V T++G    + D   LRR  LA KV   TT++ A A   A     K+N 
Sbjct: 1003 RIKNNEYTYIVNTAAGRQAIE-DSKVLRRGALAEKVNYTTTLNAAFATCMAHTADAKTNV 1061

Query: 1162 VTMTALQ 1168
             ++  L 
Sbjct: 1062 TSVQELH 1068



 Score =  261 bits (666), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 164/429 (38%), Positives = 246/429 (57%), Gaps = 26/429 (6%)

Query: 67  KIDS-SAELSNGAA----SSKDQKLGKRTDLRKILILGAGPIVIGQACEFDYSGTQACKA 121
           ++D+ +AE S+  A    S  D+   + TD  KI++LG GP  IGQ  EFDY    A  A
Sbjct: 528 RVDTCAAEFSSDTAYMYSSYDDECEAQPTDKDKIMVLGGGPNRIGQGIEFDYCCVHASLA 587

Query: 122 LKEEGYEVILINSNPATIMTDPGLADRTYITPMTPELVEQVLEKERPDALLPTMGGQTAL 181
           L+E+GYE I++N NP T+ TD   +DR Y  P+T E V  ++  E+P  ++   GGQT L
Sbjct: 588 LREDGYETIMVNCNPETVSTDYDTSDRLYFEPVTLEDVLSIVRVEKPKGVIVQYGGQTPL 647

Query: 182 NLAVALAESGALEKYGVELIGAKLDAIKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECI 241
            LA       ALE  GV +IG   DAI +AEDR+ F+ A+  +G+  P +    T+D+ +
Sbjct: 648 KLA------RALEAAGVPIIGTSPDAIDRAEDRERFQAAVDRLGLLQPENATVTTIDQAV 701

Query: 242 SIANEIGEFPLIIRPAFTLGGTGGGIAYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKE 301
             + EIG FPL++RP++ LGG    I Y++++        ++ S  S VL+++ L    E
Sbjct: 702 EKSKEIG-FPLVVRPSYVLGGRAMEIVYDEQDLRRYFNEAVSVSNESPVLLDRFLDDATE 760

Query: 302 YELEVMRDLADNVVIICSIENVDPMGVHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREI 361
            +++ + D  + VVI   +E+++  GVH+GDS    PA TL+ +   ++R+    +  E+
Sbjct: 761 VDIDAICD-GERVVIGGIMEHIEQAGVHSGDSACSLPAYTLSQEIQDKMREQVEKLAFEL 819

Query: 362 GVECGGSNVQFAVNPVDGEVMVIEMNPRVSRSSALASKATGFPIAKMAAKLSVGYSLDQI 421
           GV  G  N QFAV   D EV +IE+NPR +R+    SKATG P+AK+AA++  G SL+  
Sbjct: 820 GVR-GLMNTQFAVK--DNEVYLIEVNPRAARTVPFVSKATGAPLAKIAARVMAGQSLES- 875

Query: 422 PNDITKKTPASFEPSIDYVVTKIPRFAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQ 481
               TK+    +     Y V ++    F KFPG +PLL  +M+S GE M +G TF E++ 
Sbjct: 876 -QGFTKEIIPPY-----YSVKEVV-LPFNKFPGVDPLLGPEMRSTGEVMGVGATFAEAYS 928

Query: 482 KALRSLECG 490
           KA   L CG
Sbjct: 929 KA--ELGCG 935


>gi|167550756|ref|ZP_02344513.1| carbamoyl-phosphate synthase, large subunit [Salmonella enterica
            subsp. enterica serovar Saintpaul str. SARA29]
 gi|205324441|gb|EDZ12280.1| carbamoyl-phosphate synthase, large subunit [Salmonella enterica
            subsp. enterica serovar Saintpaul str. SARA29]
          Length = 1075

 Score = 1226 bits (3173), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 617/1078 (57%), Positives = 784/1078 (72%), Gaps = 19/1078 (1%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILILGAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  E+V +++EKERPDA+LPTMGGQTALN A+ L   G LE++GV +IGA  DA
Sbjct: 63   ATYIEPIHWEVVRKIIEKERPDAVLPTMGGQTALNCALELERQGVLEEFGVTMIGATADA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  F  AMK IG+ T  SGI +T++E +++A ++G FP IIRP+FT+GGTGGGI
Sbjct: 123  IDKAEDRRRFDIAMKKIGLDTARSGIAHTMEEALAVAADVG-FPCIIRPSFTMGGTGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEFE IC+ GL  S T+++L+++SL+GWKEYE+EV+RD  DN +I+CSIEN D MG
Sbjct: 182  AYNREEFEEICERGLDLSPTNELLIDESLIGWKEYEMEVVRDKNDNCIIVCSIENFDAMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            +HTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGVE GGSNVQFAVNP +G ++VIEMN
Sbjct: 242  IHTGDSITVAPAQTLTDKEYQIMRNASMAVLREIGVETGGSNVQFAVNPKNGRLIVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT  +TPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGYTLDELMNDITGGRTPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            F FEKF G+   LTTQMKSVGE MA+GRT QES QKALR LE G +G+      +     
Sbjct: 362  FNFEKFAGANDRLTTQMKSVGEVMAIGRTQQESLQKALRGLEVGATGFDPKVSLDDPEAL 421

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
             +++  L+    DR+  I  A + G+ VD +  L+ ID+WFL Q +EL+ +E+ +    +
Sbjct: 422  TKIRRELKDAGSDRIWYIADAFRAGLSVDGVFNLTNIDRWFLVQIEELVRLEEKVAEVGI 481

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
            + +  D   ++KR+GF+D ++A      E E+R+ R    + P YKRVDTCAAEF  +T 
Sbjct: 482  TGLNADFLRQLKRKGFADARLAKLAGVREAEIRKLRDQYDLHPVYKRVDTCAAEFATDTA 541

Query: 627  YMYSSYDFECESAPT-QKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNS 685
            YMYS+Y+ ECE+ P+  + K+++LGGGPNRIGQGIEFDYCC H S +L+  GYETIM+N 
Sbjct: 542  YMYSTYEDECEANPSVDRDKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVNC 601

Query: 686  NPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEH 745
            NPETVSTDYDTSDRLYFEP+T+EDVL ++ +E+P+G+IVQ+GGQTPLKL+          
Sbjct: 602  NPETVSTDYDTSDRLYFEPVTLEDVLEIVRIEKPKGVIVQYGGQTPLKLA---------- 651

Query: 746  RLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEI 805
            R   A+G   V + GTSPD+ID AEDRERF   +  L ++QP      +   A+  AKEI
Sbjct: 652  RALEAAG---VPVIGTSPDAIDRAEDRERFQHAVDRLKLKQPANATVTAIEQAVEKAKEI 708

Query: 806  GYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALA 865
            GYP+VVRPSYVLGGRAMEIVY +  L  Y + AV V  + PVL+D++L DA+E+DVDA+ 
Sbjct: 709  GYPLVVRPSYVLGGRAMEIVYDEADLRRYFQTAVSVSNDAPVLLDRFLDDAVEVDVDAIC 768

Query: 866  DSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMN 925
            D    V+IGGIMEHIEQAGVHSGDSAC +P  T+S    D +     KLA  L V GLMN
Sbjct: 769  DG-EMVLIGGIMEHIEQAGVHSGDSACSLPAYTLSQEIQDVMRQQVQKLAFELQVRGLMN 827

Query: 926  CQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPK 985
             Q+A+  + +VYL+E NPRA+RTVPFVSKA G PLAK AA VM+GKSL + G T+E+IP 
Sbjct: 828  VQFAVKDN-EVYLIEVNPRAARTVPFVSKATGVPLAKVAARVMAGKSLTEQGVTQEIIPP 886

Query: 986  HVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVF 1045
            + SVKE VLPF KF G D LLGPEMRSTGEVMG+  +F  AFAKAQ+ +   +   G   
Sbjct: 887  YYSVKEVVLPFNKFPGVDPLLGPEMRSTGEVMGVGRTFAEAFAKAQLGSNSTMKKQGRAL 946

Query: 1046 LSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVA 1105
            LS+ +  K  +  +A   L  GF++ +T GTA  L   GI    V K+HEGRPH  D + 
Sbjct: 947  LSVREGDKERVVDLAAKLLKQGFELDATHGTAIVLGEAGINPRLVNKVHEGRPHIQDRIK 1006

Query: 1106 NGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTVT 1163
            NG+   ++ T++G    + D   +RR  L YKV   TT++G  A   A+ +  +  VT
Sbjct: 1007 NGEYTYIINTTAGRRAIE-DSRVIRRSALQYKVHYDTTLNGGFATTMALNADATEKVT 1063


>gi|416333851|ref|ZP_11670959.1| Carbamoyl-phosphate synthase large chain [Escherichia coli WV_060327]
 gi|419912790|ref|ZP_14431237.1| carbamoyl phosphate synthase large subunit [Escherichia coli KD1]
 gi|432614834|ref|ZP_19850971.1| carbamoyl-phosphate synthase large chain [Escherichia coli KTE75]
 gi|432678441|ref|ZP_19913846.1| carbamoyl-phosphate synthase large chain [Escherichia coli KTE143]
 gi|320197524|gb|EFW72138.1| Carbamoyl-phosphate synthase large chain [Escherichia coli WV_060327]
 gi|388390690|gb|EIL52166.1| carbamoyl phosphate synthase large subunit [Escherichia coli KD1]
 gi|431158543|gb|ELE59141.1| carbamoyl-phosphate synthase large chain [Escherichia coli KTE75]
 gi|431225397|gb|ELF22597.1| carbamoyl-phosphate synthase large chain [Escherichia coli KTE143]
          Length = 1073

 Score = 1226 bits (3173), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 618/1071 (57%), Positives = 782/1071 (73%), Gaps = 19/1071 (1%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILILGAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  E+V +++EKERPDA+LPTMGGQTALN A+ L   G LE++GV +IGA  DA
Sbjct: 63   ATYIEPIHWEVVRKIIEKERPDAVLPTMGGQTALNCALELERQGVLEEFGVTMIGATADA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  F  AMK IG++T  SGI ++++E +++A E+G FP IIRP+FT+GG+GGGI
Sbjct: 123  IDKAEDRRRFDVAMKKIGLETARSGIAHSMEEALAVAAEVG-FPCIIRPSFTMGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEFE IC  GL  S T ++L+++SL+GWKEYE+EV+RD  DN +I+CSIEN D MG
Sbjct: 182  AYNREEFEEICARGLDLSPTKELLIDESLIGWKEYEMEVVRDKNDNCIIVCSIENFDAMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            +HTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGVE GGSNVQFAVNP +G ++VIEMN
Sbjct: 242  IHTGDSITVAPAQTLTDKEYQIMRNASMAVLREIGVETGGSNVQFAVNPKNGRLIVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT  +TPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGYTLDELMNDITGGRTPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            F FEKF G+   LTTQMKSVGE MA+GRT QES QKALR LE G +G+      +     
Sbjct: 362  FNFEKFAGANDRLTTQMKSVGEVMAIGRTQQESLQKALRGLEVGATGFDPKVSLDDPEAL 421

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
             +++  L+    +R+  I  A + G+ VD +  L+ ID+WFL Q +EL+ +E+ +    +
Sbjct: 422  TKIRRELKDAGAERIWYIADAFRAGLSVDGVFNLTNIDRWFLVQIEELVRLEEKVAEVGI 481

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
            + +  D   ++KR+GF+D ++A      E E+R+ R    + P YKRVDTCAAEF  +T 
Sbjct: 482  TGLNADFLRQLKRKGFADARLAKLAGVREAEIRKLRDQYDLHPVYKRVDTCAAEFATDTA 541

Query: 627  YMYSSYDFECESAP-TQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNS 685
            YMYS+Y+ ECE+ P T ++K+++LGGGPNRIGQGIEFDYCC H S +L+  GYETIM+N 
Sbjct: 542  YMYSTYEEECEANPSTDREKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVNC 601

Query: 686  NPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEH 745
            NPETVSTDYDTSDRLYFEP+T+EDVL ++ +E+P+G+IVQ+GGQTPLKL+          
Sbjct: 602  NPETVSTDYDTSDRLYFEPVTLEDVLEIVRIEKPKGVIVQYGGQTPLKLA---------- 651

Query: 746  RLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEI 805
            R   A+G   V + GTSPD+ID AEDRERF   ++ L ++QP      +   A+  AKEI
Sbjct: 652  RALEAAG---VPVIGTSPDAIDRAEDRERFQHAVERLKLKQPANATVTTIEMAVEKAKEI 708

Query: 806  GYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALA 865
            GYP+VVRPSYVLGGRAMEIVY +  L  Y + AV V  + PVL+D +L DA+E+DVDA+ 
Sbjct: 709  GYPLVVRPSYVLGGRAMEIVYDEADLRRYFQTAVSVSNDAPVLLDHFLDDAVEVDVDAIC 768

Query: 866  DSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMN 925
            D    V+IGGIMEHIEQAGVHSGDSAC +P  T+S    D +     KLA  L V GLMN
Sbjct: 769  DG-EMVLIGGIMEHIEQAGVHSGDSACSLPAYTLSQEIQDVMRQQVQKLAFELQVRGLMN 827

Query: 926  CQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPK 985
             Q+A+  + +VYL+E NPRA+RTVPFVSKA G PLAK AA VM+GKSL + G TKEVIP 
Sbjct: 828  VQFAVKNN-EVYLIEVNPRAARTVPFVSKATGVPLAKVAARVMAGKSLAEQGVTKEVIPP 886

Query: 986  HVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVF 1045
            + SVKE VLPF KF G D LLGPEMRSTGEVMG+  +F  AFAKAQ+ +   +   G   
Sbjct: 887  YYSVKEVVLPFNKFPGVDPLLGPEMRSTGEVMGVGRTFAEAFAKAQLGSNSTMKKHGRAL 946

Query: 1046 LSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVA 1105
            LS+ +  K  +  +A   L  GF++ +T GTA  L   GI    V K+HEGRPH  D + 
Sbjct: 947  LSVREGDKERVVDLAAKLLKQGFELDATHGTAIVLGEAGINPRLVNKVHEGRPHIQDRIK 1006

Query: 1106 NGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRS 1156
            NG+   ++ T+SG    + D   +RR  L YKV   TT++G  A A A+ +
Sbjct: 1007 NGEYTYIINTTSGRRAIE-DSRVIRRSALQYKVHYDTTLNGGFATAMALNA 1056


>gi|168243534|ref|ZP_02668466.1| carbamoyl-phosphate synthase, large subunit [Salmonella enterica
            subsp. enterica serovar Heidelberg str. SL486]
 gi|194447884|ref|YP_002044034.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Heidelberg str. SL476]
 gi|386589947|ref|YP_006086347.1| carbamoyl-phosphate synthase large chain [Salmonella enterica subsp.
            enterica serovar Heidelberg str. B182]
 gi|419731516|ref|ZP_14258426.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Heidelberg str. 41579]
 gi|419736179|ref|ZP_14263041.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Heidelberg str. 41563]
 gi|419738032|ref|ZP_14264799.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Heidelberg str. 41573]
 gi|419744831|ref|ZP_14271481.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Heidelberg str. 41566]
 gi|419748776|ref|ZP_14275267.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Heidelberg str. 41565]
 gi|421568737|ref|ZP_16014450.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Heidelberg str. CFSAN00322]
 gi|421575867|ref|ZP_16021476.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Heidelberg str. CFSAN00325]
 gi|421580959|ref|ZP_16026511.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Heidelberg str. CFSAN00326]
 gi|421583805|ref|ZP_16029321.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Heidelberg str. CFSAN00328]
 gi|194406188|gb|ACF66407.1| carbamoyl-phosphate synthase, large subunit [Salmonella enterica
            subsp. enterica serovar Heidelberg str. SL476]
 gi|205337398|gb|EDZ24162.1| carbamoyl-phosphate synthase, large subunit [Salmonella enterica
            subsp. enterica serovar Heidelberg str. SL486]
 gi|381291074|gb|EIC32324.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Heidelberg str. 41579]
 gi|381292925|gb|EIC34099.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Heidelberg str. 41563]
 gi|381303514|gb|EIC44541.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Heidelberg str. 41573]
 gi|381307470|gb|EIC48325.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Heidelberg str. 41566]
 gi|381313154|gb|EIC53944.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Heidelberg str. 41565]
 gi|383796991|gb|AFH44073.1| Carbamoyl-phosphate synthase large chain [Salmonella enterica subsp.
            enterica serovar Heidelberg str. B182]
 gi|402518630|gb|EJW26004.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Heidelberg str. CFSAN00326]
 gi|402521046|gb|EJW28385.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Heidelberg str. CFSAN00325]
 gi|402529455|gb|EJW36689.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Heidelberg str. CFSAN00322]
 gi|402531706|gb|EJW38911.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Heidelberg str. CFSAN00328]
          Length = 1075

 Score = 1226 bits (3173), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 617/1078 (57%), Positives = 784/1078 (72%), Gaps = 19/1078 (1%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILILGAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  E+V +++EKERPDA+LPTMGGQTALN A+ L   G LE++GV +IGA  DA
Sbjct: 63   ATYIEPIHWEVVRKIIEKERPDAVLPTMGGQTALNCALELERQGVLEEFGVTMIGATADA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  F  AMK IG+ T  SGI +T++E +++A ++G FP IIRP+FT+GGTGGGI
Sbjct: 123  IDKAEDRRRFDIAMKKIGLDTARSGIAHTMEEALAVAADVG-FPCIIRPSFTMGGTGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEFE IC+ GL  S T+++L+++SL+GWKEYE+EV+RD  DN +I+CSIEN D MG
Sbjct: 182  AYNREEFEEICERGLDLSPTNELLIDESLIGWKEYEMEVVRDKNDNCIIVCSIENFDAMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            +HTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGVE GGSNVQFAVNP +G ++VIEMN
Sbjct: 242  IHTGDSITVAPAQTLTDKEYQIMRNASMAVLREIGVETGGSNVQFAVNPKNGRLIVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT  +TPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGYTLDELMNDITGGRTPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            F FEKF G+   LTTQMKSVGE MA+GRT QES QKALR LE G +G+      +     
Sbjct: 362  FNFEKFAGANDRLTTQMKSVGEVMAIGRTQQESLQKALRGLEVGATGFDPKVSLDDPEAL 421

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
             +++  L+    DR+  I  A + G+ VD +  L+ ID+WFL Q +EL+ +E+ +    +
Sbjct: 422  TKIRRELKDAGADRIWYIADAFRAGLSVDGVFNLTNIDRWFLVQIEELVRLEEKVTEVGI 481

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
            + +  D   ++KR+GF+D ++A      E E+R+ R    + P YKRVDTCAAEF  +T 
Sbjct: 482  TGLNADFLRQLKRKGFADARLAKLAGVREAEIRKLRDQYDLHPVYKRVDTCAAEFATDTA 541

Query: 627  YMYSSYDFECESAPT-QKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNS 685
            YMYS+Y+ ECE+ P+  + K+++LGGGPNRIGQGIEFDYCC H S +L+  GYETIM+N 
Sbjct: 542  YMYSTYEDECEANPSVDRDKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVNC 601

Query: 686  NPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEH 745
            NPETVSTDYDTSDRLYFEP+T+EDVL ++ +E+P+G+IVQ+GGQTPLKL+          
Sbjct: 602  NPETVSTDYDTSDRLYFEPVTLEDVLEIVRIEKPKGVIVQYGGQTPLKLA---------- 651

Query: 746  RLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEI 805
            R   A+G   V + GTSPD+ID AEDRERF   +  L ++QP      +   A+  AKEI
Sbjct: 652  RALEAAG---VPVIGTSPDAIDRAEDRERFQHAVDRLKLKQPANATVTAIEQAVEKAKEI 708

Query: 806  GYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALA 865
            GYP+VVRPSYVLGGRAMEIVY +  L  Y + AV V  + PVL+D++L DA+E+DVDA+ 
Sbjct: 709  GYPLVVRPSYVLGGRAMEIVYDEADLRRYFQTAVSVSNDAPVLLDRFLDDAVEVDVDAIC 768

Query: 866  DSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMN 925
            D    V+IGGIMEHIEQAGVHSGDSAC +P  T+S    D +     KLA  L V GLMN
Sbjct: 769  DG-EMVLIGGIMEHIEQAGVHSGDSACSLPAYTLSQEIQDVMRQQVQKLAFELQVRGLMN 827

Query: 926  CQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPK 985
             Q+A+  + +VYL+E NPRA+RTVPFVSKA G PLAK AA VM+GKSL + G T+E+IP 
Sbjct: 828  VQFAVKDN-EVYLIEVNPRAARTVPFVSKATGVPLAKVAARVMAGKSLTEQGVTQEIIPP 886

Query: 986  HVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVF 1045
            + SVKE VLPF KF G D LLGPEMRSTGEVMG+  +F  AFAKAQ+ +   +   G   
Sbjct: 887  YYSVKEVVLPFNKFPGVDPLLGPEMRSTGEVMGVGRTFAEAFAKAQLGSNSTMKKQGRAL 946

Query: 1046 LSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVA 1105
            LS+ +  K  +  +A   L  GF++ +T GTA  L   GI    V K+HEGRPH  D + 
Sbjct: 947  LSVREGDKERVVDLAAKLLKQGFELDATHGTAIVLGEAGINPRLVNKVHEGRPHIQDRIK 1006

Query: 1106 NGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTVT 1163
            NG+   ++ T++G    + D   +RR  L YKV   TT++G  A   A+ +  +  VT
Sbjct: 1007 NGEYTYIINTTAGRRAIE-DSRVIRRSALQYKVHYDTTLNGGFATTMALNADATEKVT 1063


>gi|407793783|ref|ZP_11140814.1| carbamoyl phosphate synthase large subunit [Idiomarina xiamenensis
            10-D-4]
 gi|407213937|gb|EKE83788.1| carbamoyl phosphate synthase large subunit [Idiomarina xiamenensis
            10-D-4]
          Length = 1074

 Score = 1226 bits (3173), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 609/1067 (57%), Positives = 790/1067 (74%), Gaps = 18/1067 (1%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILILGAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  E+V ++++ ERPDA+LPTMGGQTALN A+ L + G L+KY VE+IGA  DA
Sbjct: 63   ATYIEPIHWEVVAKIIDIERPDAILPTMGGQTALNCALELDKHGVLDKYQVEMIGANADA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAE+RD F +AMK IG++TP + + ++++E   I   +G FP IIRP+FT+GG+GGGI
Sbjct: 123  IDKAENRDRFDKAMKKIGLETPNAELAHSMEEAFDILERLG-FPCIIRPSFTMGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEFE ICK GL  S T+++L+++SLLGWKEYE+EV+RD  DN +I+C+IEN DPMG
Sbjct: 182  AYNREEFEEICKRGLDLSPTNELLIDESLLGWKEYEMEVVRDKHDNCIIVCAIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            +HTGDSITVAPAQTLTDKEYQ +RD ++A++REIGVE GGSNVQF +NP  G +++IEMN
Sbjct: 242  IHTGDSITVAPAQTLTDKEYQIMRDAAMAVLREIGVETGGSNVQFGINPDTGRMVIIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKK-TPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ N+IT   TPASFEP++DYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGYTLDELENEITGGVTPASFEPALDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            F FEKF G    LTTQMKSVGE MA+GR FQES QKALR LE   +G+      + D   
Sbjct: 362  FNFEKFAGCNDRLTTQMKSVGEVMAIGRNFQESMQKALRGLELDATGFDPIVDAQDDDAQ 421

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
             ++   L+ P  +R+  I  A + GM V E+ EL+ ID+W+L Q ++L++ E+ L    +
Sbjct: 422  ARVIRELKEPGAERIWYIADAFRLGMSVREVFELTRIDEWYLVQIEDLVNCEKELSEMGL 481

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
            + +T +    +K+RGF+DK+IA     +EKEVR+KR   G+ P YKRVDTCAAEF ++T 
Sbjct: 482  TGVTSEVMRALKKRGFADKRIAQILHVSEKEVRKKRHKQGIRPVYKRVDTCAAEFASSTA 541

Query: 627  YMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSN 686
            YMYSSYD ECE+AP+ + K++++GGGPNRIGQGIEFDYCC H + +++  GYETIM+N N
Sbjct: 542  YMYSSYDEECEAAPSNRDKIMVIGGGPNRIGQGIEFDYCCVHAALAMREDGYETIMVNCN 601

Query: 687  PETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHR 746
            PETVSTDYDTSDRLYFEP+T+EDVL ++ +E+P+G+IVQ+GGQTPLKL+          R
Sbjct: 602  PETVSTDYDTSDRLYFEPITLEDVLEIVAIEQPKGVIVQYGGQTPLKLA----------R 651

Query: 747  LPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEIG 806
               A+G   V I GT+PD+ID AEDRERF A +K L ++QP+       + AL+ AK IG
Sbjct: 652  DLEANG---VPIIGTAPDAIDRAEDRERFQAAVKRLGLKQPENSTVTEISQALSEAKRIG 708

Query: 807  YPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALAD 866
            YP+VVRPSYVLGGRAME+VY +  L  YL +AV+V  + PVL+D++LS+AIE+DVDA+ D
Sbjct: 709  YPLVVRPSYVLGGRAMEVVYDEADLRRYLNDAVKVSNDAPVLLDRFLSNAIEVDVDAICD 768

Query: 867  SCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNC 926
               +V+IGGIM+HIE+AGVHSGDSAC +P  ++S      +     KLA  LNV GLMN 
Sbjct: 769  G-EDVLIGGIMQHIEEAGVHSGDSACSLPPYSLSDDIQAQLREQMRKLAFELNVNGLMNA 827

Query: 927  QYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPKH 986
            Q+A+  + +VYL+E NPRA+RTVPFVSKA G PLAK AA VM GKSL   G+ KE+IP +
Sbjct: 828  QFAVKDN-EVYLIEVNPRAARTVPFVSKATGVPLAKIAARVMVGKSLAQQGYVKEIIPPY 886

Query: 987  VSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVFL 1046
             SVKE V+PF KFQG D + GPEMRSTGEVMG+  SF  A+AKA + AG+ L  SG   L
Sbjct: 887  YSVKEVVIPFAKFQGVDPIRGPEMRSTGEVMGVGESFEEAYAKANLGAGEALAKSGKALL 946

Query: 1047 SLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVAN 1106
            S+ +  K  +  +A+  + +GF++ +T GTA  L    I+   V K+ EGRP+  D + N
Sbjct: 947  SVRNSDKEPVVDLARGLIALGFQLEATRGTADILRAADISCSVVNKLQEGRPNIVDAIKN 1006

Query: 1107 GQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEA 1153
            G+   ++ T  G    + D + +RR  L  KV   TT++ A A  +A
Sbjct: 1007 GEYSYIINTVEGRQAIE-DSVYIRREALLNKVIYTTTLNAAFATVKA 1052


>gi|336310400|ref|ZP_08565372.1| carbamoyl-phosphate synthase large chain [Shewanella sp. HN-41]
 gi|335866130|gb|EGM71121.1| carbamoyl-phosphate synthase large chain [Shewanella sp. HN-41]
          Length = 1074

 Score = 1226 bits (3173), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 615/1077 (57%), Positives = 777/1077 (72%), Gaps = 18/1077 (1%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILILGAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  E+V  ++ KERPDA+LPTMGGQTALN A+ L   G L ++ VE+IGA  DA
Sbjct: 63   ATYIEPIHWEVVRNIIAKERPDAILPTMGGQTALNCALELEAKGVLAEFNVEMIGATADA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  F QAMK IG++ P +GI ++++E   + +++G FP IIRP+FT+GG+GGGI
Sbjct: 123  IDKAEDRSRFDQAMKRIGLECPRAGIAHSMEEAYGVLDQVG-FPCIIRPSFTMGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYNKEEFE IC  GL  S T ++L+++SL+GWKEYE+EV+RD  DN +I+CSIEN DPMG
Sbjct: 182  AYNKEEFEEICSQGLDLSPTKELLIDESLIGWKEYEMEVVRDRNDNCIIVCSIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGVE GGSNVQF +NP DG +++IEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQLMRNASMAVLREIGVETGGSNVQFGINPKDGRMVIIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VG++LD++ NDIT  +TPASFEP+IDYVVTK+PR
Sbjct: 302  PRVSRSSALASKATGFPIAKIAAKLAVGFTLDELMNDITGGRTPASFEPAIDYVVTKVPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            F FEKF GS   LTTQMKSVGE MA+GRTFQES QKALR LE    G             
Sbjct: 362  FNFEKFAGSNDRLTTQMKSVGEVMAIGRTFQESLQKALRGLEVSRHGLDPITDMTKPEAM 421

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
             +++  L+ P  DR+  I  AM+ G+ +DEI  L+ ID WFL Q +EL+ +E  +    +
Sbjct: 422  SRIRLELKEPGCDRIWYIADAMRVGLSLDEIFRLTNIDPWFLVQIEELVQLEGQVAEAGL 481

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
            + + +D   ++KR+GF+D ++A     +E EVR+ R    + P YKRVDTCAAEF  +T 
Sbjct: 482  AGLNEDLLRKLKRKGFADARLADVLGVSEAEVRKLRDRFNLHPVYKRVDTCAAEFATDTA 541

Query: 627  YMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSN 686
            YMYS+Y+ ECE+ P+ + K+++LGGGPNRIGQGIEFDYCC H + +L+  GYETIM+N N
Sbjct: 542  YMYSTYEEECEANPSNRDKIMVLGGGPNRIGQGIEFDYCCVHAALALREDGYETIMVNCN 601

Query: 687  PETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHR 746
            PETVSTDYDTSDRLYFEP+T+EDVL ++ +E+P+G+IVQ+GGQTPLKL+          R
Sbjct: 602  PETVSTDYDTSDRLYFEPVTLEDVLEIVRIEKPKGVIVQYGGQTPLKLA----------R 651

Query: 747  LPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEIG 806
               A+G   V I GTSPD+ID AEDRERF   I+ L ++QP+     +   A+  A+ IG
Sbjct: 652  ALEAAG---VPIIGTSPDAIDRAEDRERFQQAIQRLEMKQPENDTVTTVEGAVIAAERIG 708

Query: 807  YPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALAD 866
            YP+VVRPSYVLGGRAMEIVY  + L+ Y   AV V    PVL+D +L DAIE+D+DA+ D
Sbjct: 709  YPLVVRPSYVLGGRAMEIVYDQQDLLRYFSEAVSVSNASPVLLDHFLDDAIEVDIDAVCD 768

Query: 867  SCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNC 926
                VVIG IMEHIEQAGVHSGDS C +P  T+S    D +     KLA  L V GLMN 
Sbjct: 769  G-ETVVIGAIMEHIEQAGVHSGDSGCSLPPYTLSQEIQDRMRVQVGKLAMELGVIGLMNV 827

Query: 927  QYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPKH 986
            Q+A+  + ++Y++E NPRA+RTVPFVSKA G PLAK AA VM+G+SL    FTKEVIP  
Sbjct: 828  QFAVKDN-EIYMIEVNPRAARTVPFVSKATGVPLAKIAARVMAGQSLKSQNFTKEVIPPF 886

Query: 987  VSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVFL 1046
             SVKE VLPF KF G D LLGPEMRSTGEVMG+  +F  A+AKAQ+ A  ++P SG   L
Sbjct: 887  YSVKEVVLPFNKFPGVDPLLGPEMRSTGEVMGVGDTFAEAYAKAQLGATSEVPKSGRALL 946

Query: 1047 SLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVAN 1106
            S+ +  K  +  +A   +++G++I +T GTA  L   GI    V K+HEGRPH  D + N
Sbjct: 947  SVRNSDKKRVADLAAKLIELGYQIDATHGTAVILGEAGINPRLVNKVHEGRPHILDRIKN 1006

Query: 1107 GQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTVT 1163
            G+   +V T+ G    + D  +LRR  L YKV   TT++ A A   A  +     VT
Sbjct: 1007 GEYTYIVNTTEGRQAIE-DSRQLRRGALRYKVNYTTTMNAAFATCMAHAADDRTNVT 1062


>gi|378953872|ref|YP_005211359.1| carbamoyl-phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Gallinarum/pullorum str. RKS5078]
 gi|438131533|ref|ZP_20873659.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Pullorum str. ATCC 9120]
 gi|357204483|gb|AET52529.1| carbamoyl-phosphate synthase large chain [Salmonella enterica subsp.
            enterica serovar Gallinarum/pullorum str. RKS5078]
 gi|434941476|gb|ELL47912.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Pullorum str. ATCC 9120]
          Length = 1075

 Score = 1226 bits (3173), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 617/1078 (57%), Positives = 784/1078 (72%), Gaps = 19/1078 (1%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILILGAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  E+V +++EKERPDA+LPTMGGQTALN A+ L   G LE++GV +IGA  DA
Sbjct: 63   ATYIEPIHWEVVRKIIEKERPDAVLPTMGGQTALNCALELERQGVLEEFGVTMIGATADA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  F  AMK IG+ T  SGI +T++E +++A ++G FP IIRP+FT+GGTGGGI
Sbjct: 123  IDKAEDRRRFDIAMKKIGLDTARSGIAHTMEEALAVAADVG-FPCIIRPSFTMGGTGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEFE IC+ GL  S T+++L+++SL+GWKEYE+EV+RD  DN +I+CSIEN D MG
Sbjct: 182  AYNREEFEEICERGLDLSPTNELLIDESLIGWKEYEMEVVRDKNDNCIIVCSIENFDAMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            +HTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGVE GGSNVQFAVNP +G ++VIEMN
Sbjct: 242  IHTGDSITVAPAQTLTDKEYQIMRNASMAVLREIGVETGGSNVQFAVNPKNGRLIVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT  +TPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGYTLDELMNDITGGRTPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            F FEKF G+   LTTQMKSVGE MA+GRT QES QKALR LE G +G+      +     
Sbjct: 362  FNFEKFAGANDRLTTQMKSVGEVMAIGRTQQESLQKALRGLEVGATGFDPKVSLDDPEAL 421

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
             +++  L+    DR+  I  A + G+ VD +  L+ ID+WFL Q +EL+ +E+ +    +
Sbjct: 422  TKIRRELKDAGADRIWYIADAFRAGLSVDGVFNLTNIDRWFLVQIEELVRLEEKVAEVGI 481

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
            + +  D   ++KR+GF+D ++A      E E+R+ R    + P YKRVDTCAAEF  +T 
Sbjct: 482  TGLNADFLRQLKRKGFADARLAKLAGVREAEIRKLRDQYDLHPVYKRVDTCAAEFATDTA 541

Query: 627  YMYSSYDFECESAPT-QKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNS 685
            YMYS+Y+ ECE+ P+  + K+++LGGGPNRIGQGIEFDYCC H S +L+  GYETIM+N 
Sbjct: 542  YMYSTYEDECEANPSVDRDKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVNC 601

Query: 686  NPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEH 745
            NPETVSTDYDTSDRLYFEP+T+EDVL ++ +E+P+G+IVQ+GGQTPLKL+          
Sbjct: 602  NPETVSTDYDTSDRLYFEPVTLEDVLEIVRIEKPKGVIVQYGGQTPLKLA---------- 651

Query: 746  RLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEI 805
            R   A+G   V + GTSPD+ID AEDRERF   +  L ++QP      +   A+  AKEI
Sbjct: 652  RALEAAG---VPVIGTSPDAIDRAEDRERFQHAVDRLKLKQPANATVTAIEQAVEKAKEI 708

Query: 806  GYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALA 865
            GYP+VVRPSYVLGGRAMEIVY +  L  Y + AV V  + PVL+D++L DA+E+DVDA+ 
Sbjct: 709  GYPLVVRPSYVLGGRAMEIVYDEADLRRYFQTAVSVSNDAPVLLDRFLDDAVEVDVDAIC 768

Query: 866  DSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMN 925
            D    V+IGGIMEHIEQAGVHSGDSAC +P  T+S    D +     KLA  L V GLMN
Sbjct: 769  DG-EMVLIGGIMEHIEQAGVHSGDSACSLPAYTLSQEIQDVMRQQVQKLAFELQVRGLMN 827

Query: 926  CQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPK 985
             Q+A+  + +VYL+E NPRA+RTVPFVSKA G PLAK AA VM+GKSL + G T+E+IP 
Sbjct: 828  VQFAVKDN-EVYLIEVNPRAARTVPFVSKATGVPLAKVAARVMAGKSLTEQGVTQEIIPP 886

Query: 986  HVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVF 1045
            + SVKE VLPF KF G D LLGPEMRSTGEVMG+  +F  AFAKAQ+ +   +   G   
Sbjct: 887  YYSVKEVVLPFNKFPGVDPLLGPEMRSTGEVMGVGRTFAEAFAKAQLGSNSTMKKQGRAL 946

Query: 1046 LSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVA 1105
            LS+ +  K  +  +A   L  GF++ +T GTA  L   GI    V K+HEGRPH  D + 
Sbjct: 947  LSVREGDKERVVDLAAKLLKQGFELDATHGTAIVLGEAGINPRLVNKVHEGRPHIQDRIK 1006

Query: 1106 NGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTVT 1163
            NG+   ++ T++G    + D   +RR  L YKV   TT++G  A   A+ +  +  VT
Sbjct: 1007 NGEYTYIINTTAGRRAIE-DSRVIRRSALQYKVHYDTTLNGGFATTIALNADATEKVT 1063


>gi|300939445|ref|ZP_07154107.1| carbamoyl-phosphate synthase, large subunit [Escherichia coli MS
            21-1]
 gi|300455666|gb|EFK19159.1| carbamoyl-phosphate synthase, large subunit [Escherichia coli MS
            21-1]
          Length = 1073

 Score = 1226 bits (3173), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 618/1071 (57%), Positives = 781/1071 (72%), Gaps = 19/1071 (1%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILILGAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  E+V  ++EKERPDA+LPTMGGQTALN A+ L   G LE++GV +IGA  DA
Sbjct: 63   ATYIEPIHWEVVRNIIEKERPDAVLPTMGGQTALNCALELERQGVLEEFGVTMIGATADA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  F  AMK IG++T  SGI ++++E +++A E+G FP IIRP+FT+GG+GGGI
Sbjct: 123  IDKAEDRRRFDVAMKKIGLETARSGIAHSMEEALAVAAEVG-FPCIIRPSFTMGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEFE IC  GL  S T ++L+++SL+GWKEYE+EV+RD  DN +I+CSIEN D MG
Sbjct: 182  AYNREEFEEICARGLDLSPTKELLIDESLIGWKEYEMEVVRDKNDNCIIVCSIENFDAMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            +HTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGVE GGSNVQFAVNP +G ++VIEMN
Sbjct: 242  IHTGDSITVAPAQTLTDKEYQIMRNASMAVLREIGVETGGSNVQFAVNPKNGRLIVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT  +TPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGYTLDELMNDITGGRTPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            F FEKF G+   LTTQMKSVGE MA+GRT QES QKALR LE G +G+      +     
Sbjct: 362  FNFEKFAGANDRLTTQMKSVGEVMAIGRTQQESLQKALRGLEVGATGFDPKVSLDDPEAL 421

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
             +++  L+    +R+  I  A + G+ VD +  L+ ID+WFL Q +EL+ +E+ +    +
Sbjct: 422  TKIRRELKDAGAERIWYIADAFRAGLSVDGVFNLTNIDRWFLVQIEELVRLEEKVAEVGI 481

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
            + +  D   ++KR+GF+D ++A      E E+R+ R    + P YKRVDTCAAEF  +T 
Sbjct: 482  TGLNADFLRQLKRKGFADARLAKLAGVREAEIRKLRDQYDLHPVYKRVDTCAAEFATDTA 541

Query: 627  YMYSSYDFECESAP-TQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNS 685
            YMYS+Y+ ECE+ P T ++K+++LGGGPNRIGQGIEFDYCC H S +L+  GYETIM+N 
Sbjct: 542  YMYSTYEEECEANPSTDREKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVNC 601

Query: 686  NPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEH 745
            NPETVSTDYDTSDRLYFEP+T+EDVL ++ +E+P+G+IVQ+GGQTPLKL+          
Sbjct: 602  NPETVSTDYDTSDRLYFEPVTLEDVLEIVRIEKPKGVIVQYGGQTPLKLA---------- 651

Query: 746  RLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEI 805
            R   A+G   V + GTSPD+ID AEDRERF   ++ L ++QP      +   A+  AKEI
Sbjct: 652  RALEAAG---VPVIGTSPDAIDRAEDRERFQHAVERLKLKQPANATVTTIEMAVEKAKEI 708

Query: 806  GYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALA 865
            GYP+VVRPSYVLGGRAMEIVY +  L  Y + AV V  + PVL+D +L DA+E+DVDA+ 
Sbjct: 709  GYPLVVRPSYVLGGRAMEIVYDEADLRRYFQTAVSVSNDAPVLLDHFLDDAVEVDVDAIC 768

Query: 866  DSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMN 925
            D    V+IGGIMEHIEQAGVHSGDSAC +P  T+S    D +     KLA  L V GLMN
Sbjct: 769  DG-EMVLIGGIMEHIEQAGVHSGDSACSLPAYTLSQEIQDVMRQQVQKLAFELQVRGLMN 827

Query: 926  CQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPK 985
             Q+A+  + +VYL+E NPRA+RTVPFVSKA G PLAK AA VM+GKSL + G TKEVIP 
Sbjct: 828  VQFAVKNN-EVYLIEVNPRAARTVPFVSKATGVPLAKVAARVMAGKSLAEQGVTKEVIPP 886

Query: 986  HVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVF 1045
            + SVKE VLPF KF G D LLGPEMRSTGEVMG+  +F  AFAKAQ+ +   +   G   
Sbjct: 887  YYSVKEVVLPFNKFPGVDPLLGPEMRSTGEVMGVGRTFAEAFAKAQLGSNSTMKKHGRAL 946

Query: 1046 LSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVA 1105
            LS+ +  K  +  +A   L  GF++ +T GTA  L   GI    V K+HEGRPH  D + 
Sbjct: 947  LSVREGDKERVVDLAAKLLKQGFELDATHGTAIVLGEAGINPRLVNKVHEGRPHIQDRIK 1006

Query: 1106 NGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRS 1156
            NG+   ++ T+SG    + D   +RR  L YKV   TT++G  A A A+ +
Sbjct: 1007 NGEYTYIINTTSGRRAIE-DSRVIRRSALQYKVHYDTTLNGGFATAMALNA 1056


>gi|421775265|ref|ZP_16211875.1| carbamoyl-phosphate synthase, large subunit [Escherichia coli AD30]
 gi|432492341|ref|ZP_19734186.1| carbamoyl-phosphate synthase large chain [Escherichia coli KTE213]
 gi|432837596|ref|ZP_20071093.1| carbamoyl-phosphate synthase large chain [Escherichia coli KTE140]
 gi|433201477|ref|ZP_20385295.1| carbamoyl-phosphate synthase large chain [Escherichia coli KTE95]
 gi|408459697|gb|EKJ83478.1| carbamoyl-phosphate synthase, large subunit [Escherichia coli AD30]
 gi|431014093|gb|ELD27802.1| carbamoyl-phosphate synthase large chain [Escherichia coli KTE213]
 gi|431392989|gb|ELG76558.1| carbamoyl-phosphate synthase large chain [Escherichia coli KTE140]
 gi|431727493|gb|ELJ91250.1| carbamoyl-phosphate synthase large chain [Escherichia coli KTE95]
          Length = 1073

 Score = 1226 bits (3173), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 618/1071 (57%), Positives = 782/1071 (73%), Gaps = 19/1071 (1%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILILGAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  E+V +++EKERPDA+LPTMGGQTALN A+ L   G LE++GV +IGA  DA
Sbjct: 63   ATYIEPIHWEVVRKIIEKERPDAVLPTMGGQTALNCALELERQGVLEEFGVTMIGATADA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  F  AMK IG++T  SGI +T++E +++A ++G FP IIRP+FT+GG+GGGI
Sbjct: 123  IDKAEDRRRFDVAMKKIGLETARSGIAHTMEEALAVAADVG-FPCIIRPSFTMGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEFE IC  GL  S T ++L+++SL+GWKEYE+EV+RD  DN +I+CSIEN D MG
Sbjct: 182  AYNREEFEEICARGLDLSPTKELLIDESLIGWKEYEMEVVRDKNDNCIIVCSIENFDAMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            +HTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGVE GGSNVQFAVNP +G ++VIEMN
Sbjct: 242  IHTGDSITVAPAQTLTDKEYQIMRNASMAVLREIGVETGGSNVQFAVNPKNGRLIVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT  +TPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGYTLDELMNDITGGRTPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            F FEKF G+   LTTQMKSVGE MA+GRT QES QKALR LE G +G+      +     
Sbjct: 362  FNFEKFAGANDRLTTQMKSVGEVMAIGRTQQESLQKALRGLEVGATGFDPKVSLDDPEAL 421

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
             +++  L+    +R+  I  A + G+ VD +  L+ ID+WFL Q +EL+ +E+ +    +
Sbjct: 422  TKIRRELKDAGAERIWYIADAFRAGLSVDGVFNLTNIDRWFLVQIEELVRLEEKVAEVGI 481

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
            + +  D   ++KR+GF+D ++A      E E+R+ R    + P YKRVDTCAAEF  +T 
Sbjct: 482  TGLNADFLRQLKRKGFADARLAKLAGVREAEIRKLRDQYDLHPVYKRVDTCAAEFATDTA 541

Query: 627  YMYSSYDFECESAP-TQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNS 685
            YMYS+Y+ ECE+ P T ++K+++LGGGPNRIGQGIEFDYCC H S +L+  GYETIM+N 
Sbjct: 542  YMYSTYEEECEANPSTDREKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVNC 601

Query: 686  NPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEH 745
            NPETVSTDYDTSDRLYFEP+T+EDVL ++ +E+P+G+IVQ+GGQTPLKL+          
Sbjct: 602  NPETVSTDYDTSDRLYFEPVTLEDVLEIVRIEKPKGVIVQYGGQTPLKLA---------- 651

Query: 746  RLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEI 805
            R   A+G   V + GTSPD+ID AEDRERF   ++ L ++QP      +   A+  AKEI
Sbjct: 652  RALEAAG---VPVIGTSPDAIDRAEDRERFQHAVERLKLKQPANATVTAIEMAVEKAKEI 708

Query: 806  GYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALA 865
            GYP+VVRPSYVLGGRAMEIVY +  L  Y + AV V  + PVL+D +L DA+E+DVDA+ 
Sbjct: 709  GYPLVVRPSYVLGGRAMEIVYDEADLRRYFQTAVSVSNDAPVLLDHFLDDAVEVDVDAIC 768

Query: 866  DSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMN 925
            D    V+IGGIMEHIEQAGVHSGDSAC +P  T+S    D +     KLA  L V GLMN
Sbjct: 769  DG-EMVLIGGIMEHIEQAGVHSGDSACSLPAYTLSQEIQDVMRQQVQKLAFELQVRGLMN 827

Query: 926  CQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPK 985
             Q+A+  + +VYL+E NPRA+RTVPFVSKA G PLAK AA VM+GKSL + G TKEVIP 
Sbjct: 828  VQFAVKNN-EVYLIEVNPRAARTVPFVSKATGVPLAKVAARVMAGKSLAEQGVTKEVIPP 886

Query: 986  HVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVF 1045
            + SVKE VLPF KF G D LLGPEMRSTGEVMG+  +F  AFAKAQ+ +   +   G   
Sbjct: 887  YYSVKEVVLPFNKFPGVDPLLGPEMRSTGEVMGVGRTFAEAFAKAQLGSNSTMKKHGRAL 946

Query: 1046 LSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVA 1105
            LS+ +  K  +  +A   L  GF++ +T GTA  L   GI    V K+HEGRPH  D + 
Sbjct: 947  LSVREGDKERVVDLAAKLLKQGFELDATHGTAIVLGEAGINPRLVNKVHEGRPHIQDRIK 1006

Query: 1106 NGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRS 1156
            NG+   ++ T+SG    + D   +RR  L YKV   TT++G  A A A+ +
Sbjct: 1007 NGEYTYIINTTSGRRAIE-DSRVIRRSALQYKVHYDTTLNGGFATAMALNA 1056


>gi|366159520|ref|ZP_09459382.1| carbamoyl phosphate synthase large subunit [Escherichia sp. TW09308]
 gi|432374963|ref|ZP_19617986.1| carbamoyl-phosphate synthase large chain [Escherichia coli KTE11]
 gi|430892221|gb|ELC14713.1| carbamoyl-phosphate synthase large chain [Escherichia coli KTE11]
          Length = 1072

 Score = 1226 bits (3172), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 615/1070 (57%), Positives = 780/1070 (72%), Gaps = 18/1070 (1%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILILGAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  E+V +++EKERPDA+LPTMGGQTALN A+ L   G LE++GV +IGA  DA
Sbjct: 63   ATYIEPIHWEVVRKIIEKERPDAVLPTMGGQTALNCALELERQGVLEEFGVTMIGATADA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  F  AMK IG++T  SGI ++++E +++A ++G FP IIRP+FT+GG+GGGI
Sbjct: 123  IDKAEDRRRFDVAMKKIGLETARSGIAHSMEEALAVAADVG-FPCIIRPSFTMGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEFE IC  GL  S T ++L+++SL+GWKEYE+EV+RD  DN +I+CSIEN D MG
Sbjct: 182  AYNREEFEEICARGLDLSPTKELLIDESLIGWKEYEMEVVRDKNDNCIIVCSIENFDAMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            +HTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGVE GGSNVQFAVNP +G ++VIEMN
Sbjct: 242  IHTGDSITVAPAQTLTDKEYQIMRNASMAVLREIGVETGGSNVQFAVNPKNGRLIVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT  +TPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGYTLDELMNDITGGRTPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            F FEKF G+   LTTQMKSVGE MA+GRT QES QKALR LE G +G+      +     
Sbjct: 362  FNFEKFAGANDRLTTQMKSVGEVMAIGRTQQESLQKALRGLEVGATGFDPKVSLDDPEAL 421

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
             +++  L+    +R+  I  A + G+ VD +  L+ ID+WFL Q +EL+ +E+ +    +
Sbjct: 422  TKIRRELKDAGAERIWYIADAFRAGLSVDGVFNLTNIDRWFLVQIEELVRLEEKVAEVGI 481

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
            + +  D   ++KR+GF+D ++A      E E+R+ R    + P YKRVDTCAAEF  +T 
Sbjct: 482  TGLNADFLRQLKRKGFADARLAKLAGVREAEIRKLRDQYNLHPVYKRVDTCAAEFATDTA 541

Query: 627  YMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSN 686
            YMYS+Y+ ECE+ P+ + K+++LGGGPNRIGQGIEFDYCC H S +L+  G+ETIM+N N
Sbjct: 542  YMYSTYEDECEANPSTRDKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGFETIMVNCN 601

Query: 687  PETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHR 746
            PETVSTDYDTSDRLYFEP+T+EDVL ++ +E+P+G+IVQ+GGQTPLKL+          R
Sbjct: 602  PETVSTDYDTSDRLYFEPVTLEDVLEIVRIEKPKGVIVQYGGQTPLKLA----------R 651

Query: 747  LPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEIG 806
               A+G   V + GTSPD+ID AEDRERF   +  L ++QP      +   A+  AKEIG
Sbjct: 652  ALEAAG---VPVIGTSPDAIDRAEDRERFQHAVDRLKLKQPANATVTAIEMAVEKAKEIG 708

Query: 807  YPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALAD 866
            YP+VVRPSYVLGGRAMEIVY +  L  Y + AV V  + PVL+D +L DA+E+DVDA+ D
Sbjct: 709  YPLVVRPSYVLGGRAMEIVYDEADLRRYFQTAVSVSNDAPVLLDHFLDDAVEVDVDAICD 768

Query: 867  SCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNC 926
                V+IGGIMEHIEQAGVHSGDSAC +P  T+S    D +     KLA  L V GLMN 
Sbjct: 769  G-EMVLIGGIMEHIEQAGVHSGDSACSLPAYTLSQEIQDVMRQQVQKLAFELQVRGLMNV 827

Query: 927  QYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPKH 986
            Q+A+  + +VYL+E NPRA+RTVPFVSKA G PLAK AA VM+GKSL + G TKEVIP +
Sbjct: 828  QFAVKNN-EVYLIEVNPRAARTVPFVSKATGVPLAKVAARVMAGKSLAEQGVTKEVIPPY 886

Query: 987  VSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVFL 1046
             SVKE VLPF KF G D LLGPEMRSTGEVMG+  +F  AFAKAQ+ +   +   G   L
Sbjct: 887  YSVKEVVLPFNKFPGVDPLLGPEMRSTGEVMGVGRTFAEAFAKAQLGSNSTMKKQGRALL 946

Query: 1047 SLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVAN 1106
            S+ +  K  +  +A   L  GF++ +T GTA  L   GI    V K+HEGRPH  D + N
Sbjct: 947  SVREGDKERVVDLAAKLLKQGFELDATHGTAIVLGEAGINPRLVNKVHEGRPHIQDRIKN 1006

Query: 1107 GQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRS 1156
            G+   ++ T+SG    + D   +RR  L YKV   TT++G  A A A+ +
Sbjct: 1007 GEYTYIINTTSGRRAIE-DSRVIRRSALQYKVHYDTTLNGGFATAMALNA 1055


>gi|451948638|ref|YP_007469233.1| carbamoyl-phosphate synthase, large subunit [Desulfocapsa sulfexigens
            DSM 10523]
 gi|451907986|gb|AGF79580.1| carbamoyl-phosphate synthase, large subunit [Desulfocapsa sulfexigens
            DSM 10523]
          Length = 1090

 Score = 1226 bits (3172), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 615/1090 (56%), Positives = 803/1090 (73%), Gaps = 24/1090 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KR DL+KI+++G+GPI+IGQACEFDYSG QACKALKEEGYEVILINSNPATIMTDP  A 
Sbjct: 3    KRDDLQKIMLIGSGPIIIGQACEFDYSGVQACKALKEEGYEVILINSNPATIMTDPEFAQ 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
            RTYI P+  +++E ++ +ERPDALLPT+GGQTALNLA+ LA+ G LE+YGVEL+GA   +
Sbjct: 63   RTYIEPLQADVLEAIIIRERPDALLPTLGGQTALNLALDLADRGVLEQYGVELLGANAHS 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I+KAEDR LFK+AM  IG+  P SG  +T +E + I  ++G +PL+IRP FTLGGTGGGI
Sbjct: 123  IRKAEDRQLFKEAMANIGLDLPRSGTAHTFEEAVLIREQLGVYPLVIRPGFTLGGTGGGI 182

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN ++FE     GL  S TS+VL+E+S+ GWKE+ELEVMRD  DN VI+CSIEN DPMG
Sbjct: 183  AYNNQDFEETVNRGLFYSPTSEVLIEESIQGWKEFELEVMRDGKDNCVIVCSIENFDPMG 242

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            +HTGDSITVAP QTLTD+EYQ +RD S+A++REIGVE GGSNVQFA+NP DG +++IEMN
Sbjct: 243  IHTGDSITVAPIQTLTDREYQLMRDASLAVMREIGVETGGSNVQFALNPKDGRMVIIEMN 302

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRF 447
            PRVSRSSALASKATGFPIAK+AAKL++GY+LD++ NDIT++TP  FEP++DYVVTKIPRF
Sbjct: 303  PRVSRSSALASKATGFPIAKIAAKLAIGYTLDELQNDITRETPTCFEPTLDYVVTKIPRF 362

Query: 448  AFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGC----SNVKELD 503
             FEKFP ++  L TQMKSVGEAM++G+TF++S QKALRS+E G +G+G      +++ L 
Sbjct: 363  TFEKFPTADDTLGTQMKSVGEAMSIGKTFKQSLQKALRSIETGRAGFGADGRDGSLETLS 422

Query: 504  WDWEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLT 563
             D  +L+  LR   PDR+  I  A ++   V+++H L  +D WFL    EL   E  + +
Sbjct: 423  DD--ELESRLRTAKPDRIFLIRVAFRRCWSVEKVHHLCTVDPWFLGHLAELAAYEDEIRS 480

Query: 564  -QSVSNMTKD--DFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAE 620
             +S+  + +D   F + K  G+SD QIA+   +TE++VR+ R+   ++P Y +VDTCAAE
Sbjct: 481  AESLKGLRQDLPLFRQAKEFGYSDCQIAWLLNTTEEKVRQARMECNLLPVYSQVDTCAAE 540

Query: 621  FEANTPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYET 680
            F A+TPY YS+Y    ES PT++KK++I+GGGPNRIGQGIEFDYCC H S++LQ AG ET
Sbjct: 541  FAAHTPYFYSTYGDVNESIPTERKKIMIIGGGPNRIGQGIEFDYCCVHGSYALQGAGIET 600

Query: 681  IMMNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQ 740
            IM+NSNPETVSTDYDTSDRLYFEPLT+ED+L++   E+ +G IVQFGGQTPL L+  + +
Sbjct: 601  IMVNSNPETVSTDYDTSDRLYFEPLTLEDILHIYGNEKCDGAIVQFGGQTPLNLARDLEK 660

Query: 741  YLDEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALA 800
                        +G V + GTSP  I+AAEDR+ F+ ++K L I QP+ G+A +  +A  
Sbjct: 661  ------------NG-VTVIGTSPADIEAAEDRKFFSRLVKNLGILQPENGMASTIEEART 707

Query: 801  IAKEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEID 860
            IA EIGYPV++RPS+VLGGRAM IVY +E L TY++ AV+   +RPVLID+YL DA+E+D
Sbjct: 708  IAAEIGYPVLIRPSFVLGGRAMMIVYDEEMLTTYMDEAVDASEDRPVLIDRYLEDAVEVD 767

Query: 861  VDALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNV 920
            VD ++D     V+  +MEHIE AG HSGDSACMIP  ++S+S  ++I S    LAK L V
Sbjct: 768  VDCISDG-HTTVVAAVMEHIEHAGAHSGDSACMIPAVSLSASTAESIRSHAHSLAKGLRV 826

Query: 921  CGLMNCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTK 980
            CGLMN Q+AI    DVY+LE NPRASRTVPFVSKAIG  LAK  ALVM+G SL  LGFT+
Sbjct: 827  CGLMNIQFAIHNE-DVYVLEVNPRASRTVPFVSKAIGVHLAKLGALVMAGYSLESLGFTE 885

Query: 981  EVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPL 1040
            E+IP H SVKEAV PF +F G DV LGPEM+STGEVMGID    +AF K+Q+AAG  +P 
Sbjct: 886  EIIPAHCSVKEAVFPFNRFPGIDVQLGPEMKSTGEVMGIDPFMNLAFYKSQLAAGNHIPT 945

Query: 1041 SGTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHA 1100
            SG +FLS+ +  K  +  +A     IGF I +TSGT+  L    I    V K+ +G P+ 
Sbjct: 946  SGNIFLSIRNRDKAAMLPLADRLFRIGFTIFATSGTSSILADHSIPSLSVAKIADGSPNV 1005

Query: 1101 GDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSN 1160
             D++   ++  ++   +G +  +IDG+K+R   +   +P+ TT+SG  A    + +LK  
Sbjct: 1006 LDLIEEKKVDWLINIPTGSTTTRIDGIKMRSLAVMRGLPITTTLSGMQAATNGLSTLKEK 1065

Query: 1161 TVTMTALQDF 1170
             +T+ +LQ+F
Sbjct: 1066 PITVCSLQEF 1075


>gi|317046861|ref|YP_004114509.1| carbamoyl-phosphate synthase large subunit [Pantoea sp. At-9b]
 gi|316948478|gb|ADU67953.1| carbamoyl-phosphate synthase, large subunit [Pantoea sp. At-9b]
          Length = 1074

 Score = 1226 bits (3172), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 616/1071 (57%), Positives = 784/1071 (73%), Gaps = 19/1071 (1%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILILGAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  E+V +++EKERPDA+LPTMGGQTALN A+ L   G LE++GV +IGA  DA
Sbjct: 63   ATYIEPIHWEVVRKIIEKERPDAVLPTMGGQTALNCALELERQGVLEEFGVTMIGATADA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  F  AMK+IG+ T  SGI +T++E +++A ++G FP IIRP+FT+GGTGGGI
Sbjct: 123  IDKAEDRRRFDVAMKSIGLDTARSGIAHTMEEALAVAEDVG-FPCIIRPSFTMGGTGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEFE IC+ GL  S T+++L+++SL+GWKEYE+EV+RD  DN +I+CSIEN D MG
Sbjct: 182  AYNREEFEEICERGLDLSPTNELLIDESLIGWKEYEMEVVRDKNDNCIIVCSIENFDAMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            +HTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGVE GGSNVQF+VNP DG ++VIEMN
Sbjct: 242  IHTGDSITVAPAQTLTDKEYQIMRNASLAVLREIGVETGGSNVQFSVNPKDGRLIVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VG++LD++ NDIT  +TPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGFTLDELMNDITGGRTPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            F FEKF G+   LTTQMKSVGE MA+GRTFQES QKALR LE G +G+      +     
Sbjct: 362  FNFEKFAGANDRLTTQMKSVGEVMAIGRTFQESMQKALRGLEVGANGFDPKVNLDDAEAL 421

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
             +++  L+    DR+  I  A + GM VD +  L+ ID+WFL Q +EL+ +E+ +  + V
Sbjct: 422  TRIRRELKDAGSDRIWYIADAFRAGMSVDGVFNLTNIDRWFLVQIEELVRLEEQVAREGV 481

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
              +       +KR+GF+D ++A      E E+R+ R    + P YKRVDTCAAEF  +T 
Sbjct: 482  KVLDFAFLRALKRKGFADARLATLAGVAESEIRKLRQQFNLHPVYKRVDTCAAEFATDTA 541

Query: 627  YMYSSYDFECESAPTQ-KKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNS 685
            YMYS+Y+ ECE+ P Q + K+++LGGGPNRIGQGIEFDYCC H + +L+  G+ETIM+N 
Sbjct: 542  YMYSTYEEECEANPNQDRDKIMVLGGGPNRIGQGIEFDYCCVHAALALREDGFETIMVNC 601

Query: 686  NPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEH 745
            NPETVSTDYDTSDRLYFEP+T+EDVL ++ +E+P+G+IVQ+GGQTPLKL+          
Sbjct: 602  NPETVSTDYDTSDRLYFEPVTLEDVLEIVRIEQPKGVIVQYGGQTPLKLA---------- 651

Query: 746  RLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEI 805
            R   A+G   V + GTSPD+ID AEDRERF   ++ L+++QP      +   A+  A  I
Sbjct: 652  RALEAAG---VPVIGTSPDAIDRAEDRERFQQAVERLNLKQPANATVSTLEQAVEKAVGI 708

Query: 806  GYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALA 865
            GYP+VVRPSYVLGGRAMEIVY +  L  Y + AV V  + PVL+D++L DA+E+DVDA+ 
Sbjct: 709  GYPLVVRPSYVLGGRAMEIVYDEIDLKRYFQTAVSVSNDAPVLLDRFLDDAVEVDVDAIC 768

Query: 866  DSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMN 925
            D    V+IGGIMEHIEQAGVHSGDSAC +P  T+++   D +     KLA  LNV GLMN
Sbjct: 769  DG-ERVLIGGIMEHIEQAGVHSGDSACSLPAYTLNAEIQDVMRQQVEKLAFELNVRGLMN 827

Query: 926  CQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPK 985
             Q+A+  + +VYL+E NPRA+RTVPFVSKA G PLAK AA VM+GK+L + G TKEVIP 
Sbjct: 828  VQFAVKDN-EVYLIEVNPRAARTVPFVSKATGVPLAKVAARVMAGKTLAEQGVTKEVIPP 886

Query: 986  HVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVF 1045
            + SVKE VLPF KFQG D +LGPEMRSTGEVMG+  +F  AFAKA + A   +  SG   
Sbjct: 887  YYSVKEVVLPFNKFQGVDPILGPEMRSTGEVMGVGRTFAEAFAKAMLGAQSNMKKSGRAL 946

Query: 1046 LSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVA 1105
            LS+ +  K  +  +A      GF++ +T GTA  L   GI    V K+HEGRPH  D + 
Sbjct: 947  LSVREGDKKRIVDLAAKLQKFGFELDATHGTAVVLGEAGINPRLVNKVHEGRPHIQDRLK 1006

Query: 1106 NGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRS 1156
            NG+   +V T++G    + D   +RR  L YKV   TT++G  A A A+ +
Sbjct: 1007 NGEYTYIVNTTAGRQAIE-DSKLIRRSALQYKVHYDTTLNGGFATAMALNA 1056


>gi|28897245|ref|NP_796850.1| carbamoyl phosphate synthase large subunit [Vibrio parahaemolyticus
            RIMD 2210633]
 gi|153838433|ref|ZP_01991100.1| carbamoyl-phosphate synthase, large subunit [Vibrio parahaemolyticus
            AQ3810]
 gi|260366314|ref|ZP_05778766.1| carbamoyl-phosphate synthase, large subunit [Vibrio parahaemolyticus
            K5030]
 gi|260876212|ref|ZP_05888567.1| carbamoyl-phosphate synthase, large subunit [Vibrio parahaemolyticus
            AN-5034]
 gi|260897166|ref|ZP_05905662.1| carbamoyl-phosphate synthase, large subunit [Vibrio parahaemolyticus
            Peru-466]
 gi|260902207|ref|ZP_05910602.1| carbamoyl-phosphate synthase, large subunit [Vibrio parahaemolyticus
            AQ4037]
 gi|31340007|sp|Q87SF3.1|CARB_VIBPA RecName: Full=Carbamoyl-phosphate synthase large chain; AltName:
            Full=Carbamoyl-phosphate synthetase ammonia chain
 gi|28805454|dbj|BAC58734.1| carbamoyl-phosphate synthase, large subunit [Vibrio parahaemolyticus
            RIMD 2210633]
 gi|149748196|gb|EDM59055.1| carbamoyl-phosphate synthase, large subunit [Vibrio parahaemolyticus
            AQ3810]
 gi|308087977|gb|EFO37672.1| carbamoyl-phosphate synthase, large subunit [Vibrio parahaemolyticus
            Peru-466]
 gi|308093037|gb|EFO42732.1| carbamoyl-phosphate synthase, large subunit [Vibrio parahaemolyticus
            AN-5034]
 gi|308108468|gb|EFO46008.1| carbamoyl-phosphate synthase, large subunit [Vibrio parahaemolyticus
            AQ4037]
 gi|308114738|gb|EFO52278.1| carbamoyl-phosphate synthase, large subunit [Vibrio parahaemolyticus
            K5030]
          Length = 1077

 Score = 1226 bits (3172), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 613/1065 (57%), Positives = 780/1065 (73%), Gaps = 22/1065 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILILGAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIQSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  E+V +++EKERPDA+LPTMGGQTALN A+ L + G L ++GVE+IGA  DA
Sbjct: 63   ATYIEPIQWEVVRKIIEKERPDAVLPTMGGQTALNCALDLEKHGVLAEFGVEMIGATADA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  F +AMK+IG++ P +    T++E   + + +G FP IIRP+FT+GGTGGGI
Sbjct: 123  IDKAEDRSRFDKAMKSIGLECPRADTAKTMEEAYKVLDMVG-FPCIIRPSFTMGGTGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYNKEEFE IC+ GL  S T+++L+++SL+GWKEYE+EV+RD ADN +I+CSIEN DPMG
Sbjct: 182  AYNKEEFEEICRRGLDLSPTNELLIDESLIGWKEYEMEVVRDKADNCIIVCSIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            +HTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGVE GGSNVQF +NP DG +++IEMN
Sbjct: 242  IHTGDSITVAPAQTLTDKEYQLMRNASLAVLREIGVETGGSNVQFGINPKDGRMVIIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VG++LD++ NDIT   TPASFEP+IDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKIAAKLAVGFTLDELQNDITGGATPASFEPTIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWD- 505
            F FEKF G+   LTTQMKSVGE MA+GR  QES  KALR LE G +G+    + +LD   
Sbjct: 362  FNFEKFAGANDRLTTQMKSVGEVMAIGRNQQESLHKALRGLEVGATGF--DEMVDLDAPD 419

Query: 506  -WEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQ 564
               ++++ L+    +R+  I  A + GM VD +  L+ ID+WFL Q +EL+ +E+ +   
Sbjct: 420  ALTKIRHELKEAGAERIWYIADAFRAGMSVDGVFNLTNIDRWFLVQIEELVKLEEQVKAG 479

Query: 565  SVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEAN 624
              + +T++   ++KR+GFSD +++      E E+R  R    + P YKRVDTCAAEF ++
Sbjct: 480  GFAGLTEEVLRQMKRKGFSDARLSKLLGVAESEIRRLRDQFDIHPVYKRVDTCAAEFSSD 539

Query: 625  TPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMN 684
            T YMYSSYD ECE+ PT K K+++LGGGPNRIGQGIEFDYCC H S +L+  GYETIM+N
Sbjct: 540  TAYMYSSYDEECEANPTDKDKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVN 599

Query: 685  SNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDE 744
             NPETVSTDYDTSDRLYFEP+T+EDVL++  +E+P+G+IVQ+GGQTPLKL+         
Sbjct: 600  CNPETVSTDYDTSDRLYFEPVTLEDVLSIARVEKPKGVIVQYGGQTPLKLA--------- 650

Query: 745  HRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKE 804
             R   A+G   V I GTSPD+ID AEDRERF A ++ L + QP+     +   A+  ++E
Sbjct: 651  -RALEAAG---VPIIGTSPDAIDRAEDRERFQAAVERLGLLQPQNATVTAMEQAVEKSRE 706

Query: 805  IGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDAL 864
            IG+P+VVRPSYVLGGRAMEIVY ++ L  Y   AV V  E PVL+D++L DA E+D+DA+
Sbjct: 707  IGFPLVVRPSYVLGGRAMEIVYDEQDLRRYFNEAVSVSNESPVLLDRFLDDATEVDIDAI 766

Query: 865  ADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLM 924
             D    VVIGGIMEHIEQAGVHSGDSAC +P  T+S    D +     KLA  L V GLM
Sbjct: 767  CDG-ERVVIGGIMEHIEQAGVHSGDSACSLPAYTLSQEIQDKMREQVEKLAFELGVRGLM 825

Query: 925  NCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIP 984
            N Q+A+  + +VYL+E NPRA+RTVPFVSKA G PLAK AA VM+G+SL   GFTKE+IP
Sbjct: 826  NTQFAVKDN-EVYLIEVNPRAARTVPFVSKATGAPLAKIAARVMAGQSLESQGFTKEIIP 884

Query: 985  KHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTV 1044
             + SVKE VLPF KF G D LLGPEMRSTGEVMG+  +F  A+AKA++  G   P  G  
Sbjct: 885  PYYSVKEVVLPFNKFPGVDPLLGPEMRSTGEVMGVGATFAEAYAKAELGCGSVYPEGGRA 944

Query: 1045 FLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMV 1104
             LS+ +  K  +  +A   + +G+++ +T GTA  L   GI    V K+HEGRPH  D +
Sbjct: 945  LLSVREGDKQRVVDLASKLVKLGYQLDATHGTAVILGEAGINPRLVNKVHEGRPHILDRI 1004

Query: 1105 ANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALA 1149
             N +   +V T++G    + D   LRR  LA KV   TT++ A A
Sbjct: 1005 KNNEYTYIVNTAAGRQAIE-DSKVLRRGALAEKVNYTTTLNAAFA 1048



 Score =  256 bits (653), Expect = 7e-65,   Method: Compositional matrix adjust.
 Identities = 163/429 (37%), Positives = 246/429 (57%), Gaps = 26/429 (6%)

Query: 67  KIDS-SAELSNGAA---SSKDQKL-GKRTDLRKILILGAGPIVIGQACEFDYSGTQACKA 121
           ++D+ +AE S+  A   SS D++     TD  KI++LG GP  IGQ  EFDY    A  A
Sbjct: 528 RVDTCAAEFSSDTAYMYSSYDEECEANPTDKDKIMVLGGGPNRIGQGIEFDYCCVHASLA 587

Query: 122 LKEEGYEVILINSNPATIMTDPGLADRTYITPMTPELVEQVLEKERPDALLPTMGGQTAL 181
           L+E+GYE I++N NP T+ TD   +DR Y  P+T E V  +   E+P  ++   GGQT L
Sbjct: 588 LREDGYETIMVNCNPETVSTDYDTSDRLYFEPVTLEDVLSIARVEKPKGVIVQYGGQTPL 647

Query: 182 NLAVALAESGALEKYGVELIGAKLDAIKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECI 241
            LA       ALE  GV +IG   DAI +AEDR+ F+ A++ +G+  P +     +++ +
Sbjct: 648 KLA------RALEAAGVPIIGTSPDAIDRAEDRERFQAAVERLGLLQPQNATVTAMEQAV 701

Query: 242 SIANEIGEFPLIIRPAFTLGGTGGGIAYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKE 301
             + EIG FPL++RP++ LGG    I Y++++        ++ S  S VL+++ L    E
Sbjct: 702 EKSREIG-FPLVVRPSYVLGGRAMEIVYDEQDLRRYFNEAVSVSNESPVLLDRFLDDATE 760

Query: 302 YELEVMRDLADNVVIICSIENVDPMGVHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREI 361
            +++ + D  + VVI   +E+++  GVH+GDS    PA TL+ +   ++R+    +  E+
Sbjct: 761 VDIDAICD-GERVVIGGIMEHIEQAGVHSGDSACSLPAYTLSQEIQDKMREQVEKLAFEL 819

Query: 362 GVECGGSNVQFAVNPVDGEVMVIEMNPRVSRSSALASKATGFPIAKMAAKLSVGYSLDQI 421
           GV  G  N QFAV   D EV +IE+NPR +R+    SKATG P+AK+AA++  G SL+  
Sbjct: 820 GVR-GLMNTQFAVK--DNEVYLIEVNPRAARTVPFVSKATGAPLAKIAARVMAGQSLES- 875

Query: 422 PNDITKKTPASFEPSIDYVVTKIPRFAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQ 481
               TK+    +     Y V ++    F KFPG +PLL  +M+S GE M +G TF E++ 
Sbjct: 876 -QGFTKEIIPPY-----YSVKEVV-LPFNKFPGVDPLLGPEMRSTGEVMGVGATFAEAYA 928

Query: 482 KALRSLECG 490
           KA   L CG
Sbjct: 929 KA--ELGCG 935


>gi|423197264|ref|ZP_17183847.1| carbamoyl-phosphate synthase large chain [Aeromonas hydrophila SSU]
 gi|404631511|gb|EKB28144.1| carbamoyl-phosphate synthase large chain [Aeromonas hydrophila SSU]
          Length = 1078

 Score = 1226 bits (3172), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 609/1072 (56%), Positives = 782/1072 (72%), Gaps = 26/1072 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KR DL+ ILILGAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRNDLQSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+T E+V ++++KERPDA+LPTMGGQTALN A+ L + G L ++GVE+IGA  DA
Sbjct: 63   ATYIEPITWEVVREIIKKERPDAILPTMGGQTALNCALDLEKHGVLAEFGVEMIGATADA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  F +AM++IG++ P +GI + ++E   +  E+G FP IIRP+FT+GG+GGGI
Sbjct: 123  IDKAEDRSRFDKAMRSIGLECPRAGIAHNMEEAWKVQAEVG-FPCIIRPSFTMGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN EEF  IC+ GL  S T ++L+++SL+GWKEYE+EV+RD  DN +I+C+IEN DPMG
Sbjct: 182  AYNTEEFVEICERGLDLSPTKELLIDESLIGWKEYEMEVVRDRNDNCIIVCAIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            +HTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGVE GGSNVQF +NP DG +++IEMN
Sbjct: 242  IHTGDSITVAPAQTLTDKEYQIMRNASMAVLREIGVETGGSNVQFGINPKDGRMVIIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL++GY+LD++ NDIT  +TPASFEP+IDYVVTK+PR
Sbjct: 302  PRVSRSSALASKATGFPIAKIAAKLAIGYTLDELMNDITGGRTPASFEPAIDYVVTKVPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWD- 505
            F FEKF G+   LTTQMKSVGE MA+GR FQES  KALR LE G +G+       LD + 
Sbjct: 362  FNFEKFAGANDRLTTQMKSVGEVMAIGRNFQESLHKALRGLETGKTGFD----PMLDLNA 417

Query: 506  ---WEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLL 562
                 ++++ L+    DR+  I  A + G+ +D +  L+ ID WFL Q +EL+ +E+ + 
Sbjct: 418  PDALTRIRHELQDAGSDRIFYIADAFRAGLSMDGVFRLTKIDPWFLVQIEELVKLEEQVK 477

Query: 563  TQSVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFE 622
             + ++ +  D    +KR+GF+D ++A      E EVR+ R    + P YKRVDTCAAEF 
Sbjct: 478  ERGMAGLDADFLRALKRKGFADARLAKILGVAEGEVRKLRARHNIFPVYKRVDTCAAEFA 537

Query: 623  ANTPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIM 682
             NT YMYSSYD ECE+ PT + K++++GGGPNRIGQGIEFDYCC H + +L+  GYETIM
Sbjct: 538  TNTAYMYSSYDEECEANPTNRDKIMVIGGGPNRIGQGIEFDYCCVHAALALREDGYETIM 597

Query: 683  MNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYL 742
            +N NPETVSTDYDTSDRLYFEP+T+EDVL ++ +E+P+G+IVQ+GGQTPLKL+       
Sbjct: 598  VNCNPETVSTDYDTSDRLYFEPVTLEDVLEIVRVEQPKGVIVQYGGQTPLKLA------- 650

Query: 743  DEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIA 802
               R   A+G   V + GTSPD+ID AEDRERF + ++ L ++QP+ G   +   A+  A
Sbjct: 651  ---RALEANG---VPVIGTSPDAIDRAEDRERFQSAVERLGLKQPENGTVTALEQAVLTA 704

Query: 803  KEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVD 862
            + I YP+VVRPSYVLGGRAMEIVY ++ L  Y   AV V  E PVL+D++L DA E+DVD
Sbjct: 705  ERITYPLVVRPSYVLGGRAMEIVYDEQDLRRYFAEAVSVSNESPVLLDRFLDDATEVDVD 764

Query: 863  ALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCG 922
            A+ D   +VVIGGIMEHIEQAG+HSGDSAC +P  T+S +  D +     KLA  L V G
Sbjct: 765  AICDGV-DVVIGGIMEHIEQAGIHSGDSACSLPPYTLSKAIQDEMREQVRKLALELGVVG 823

Query: 923  LMNCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEV 982
            LMN Q+A+  + ++YL+E NPRA+RTVPFVSKA G PLAK AA VM+G+SL + GFT E+
Sbjct: 824  LMNVQFAVKDN-EIYLIEVNPRAARTVPFVSKATGAPLAKIAARVMAGQSLKEQGFTSEI 882

Query: 983  IPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSG 1042
            IP + SVKE VLPF KF G D LLGPEMRSTGEVMG+  SF  A+AKAQ+ AG ++P  G
Sbjct: 883  IPPYYSVKEVVLPFAKFPGVDPLLGPEMRSTGEVMGVGSSFAEAYAKAQLGAGHQVPREG 942

Query: 1043 TVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGD 1102
               LS+    K  +  +A   L++G+ + +T GTA  L    I    V K+HEGRPH  D
Sbjct: 943  RALLSVRHGDKERVVNLAAKLLELGYDLDATHGTAVTLGEASINPRLVNKVHEGRPHILD 1002

Query: 1103 MVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAI 1154
             + NG+   +V T+ G    + D  +LRR  L +KV   TT+  A A   AI
Sbjct: 1003 RIKNGEYTYIVNTAEGRRAIE-DSKQLRRGALQHKVAYTTTLHAAFATCMAI 1053


>gi|419167998|ref|ZP_13712399.1| carbamoyl-phosphate synthase large chain [Escherichia coli DEC7A]
 gi|378019280|gb|EHV82111.1| carbamoyl-phosphate synthase large chain [Escherichia coli DEC7A]
          Length = 1073

 Score = 1226 bits (3172), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 618/1071 (57%), Positives = 782/1071 (73%), Gaps = 19/1071 (1%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILILGAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  E+V +++EKERPDA+LPTMGGQTALN A+ L   G LE++GV +IGA  DA
Sbjct: 63   ATYIEPIHWEVVRKIIEKERPDAVLPTMGGQTALNCALELERQGVLEEFGVTMIGATADA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  F  AMK IG++T  SGI +T++E +++A ++G FP IIRP+FT+GG+GGGI
Sbjct: 123  IDKAEDRRRFDVAMKKIGLETARSGIAHTMEEALAVAADVG-FPCIIRPSFTMGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEFE IC  GL  S T ++L+++SL+GWKEYE+EV+RD  DN +I+CSIEN D MG
Sbjct: 182  AYNREEFEEICARGLDLSPTKELLIDESLIGWKEYEMEVVRDKNDNCIIVCSIENFDAMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            +HTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGVE GGSNVQFAVNP +G ++VIEMN
Sbjct: 242  IHTGDSITVAPAQTLTDKEYQIMRNASMAVLREIGVETGGSNVQFAVNPKNGRLIVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT  +TPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGYTLDELMNDITGGRTPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            F FEKF G+   LTTQMKSVGE MA+GRT QES QKALR LE G +G+      +     
Sbjct: 362  FNFEKFAGANDRLTTQMKSVGEVMAIGRTQQESLQKALRGLEVGATGFDPKVSLDDPEAL 421

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
             +++  L+    +R+  I  A + G+ VD +  L+ ID+WFL Q +EL+ +E+ +    +
Sbjct: 422  TKIRRELKDAGAERIWYIADAFRAGLSVDGVFNLTNIDRWFLVQIEELVRLEEKVAEVGI 481

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
            + +  +   ++KR+GF+D ++A      E E+R+ R    + P YKRVDTCAAEF  +T 
Sbjct: 482  TGLNAEFLRQLKRKGFADARLAKLAGVREAEIRKLRDQYDLHPVYKRVDTCAAEFATDTA 541

Query: 627  YMYSSYDFECESAP-TQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNS 685
            YMYS+Y+ ECE+ P T ++K+++LGGGPNRIGQGIEFDYCC H S +L+  GYETIM+N 
Sbjct: 542  YMYSTYEEECEANPSTDREKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVNC 601

Query: 686  NPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEH 745
            NPETVSTDYDTSDRLYFEP+T+EDVL ++ +E+P+G+IVQ+GGQTPLKL+          
Sbjct: 602  NPETVSTDYDTSDRLYFEPVTLEDVLEIVRIEKPKGVIVQYGGQTPLKLA---------- 651

Query: 746  RLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEI 805
            R   A+G   V + GTSPD+ID AEDRERF   ++ L ++QP      +   AL  AKEI
Sbjct: 652  RALEAAG---VPVIGTSPDAIDRAEDRERFQHAVERLKLKQPANATVTAIEMALEKAKEI 708

Query: 806  GYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALA 865
            GYP+VVRPSYVLGGRAMEIVY +  L  Y + AV V  + PVL+D +L DA+E+DVDA+ 
Sbjct: 709  GYPLVVRPSYVLGGRAMEIVYDEADLRRYFQTAVSVSNDAPVLLDHFLDDAVEVDVDAIC 768

Query: 866  DSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMN 925
            D    V+IGGIMEHIEQAGVHSGDSAC +P  T+S    D +     KLA  L V GLMN
Sbjct: 769  DG-EMVLIGGIMEHIEQAGVHSGDSACSLPAYTLSQEIQDVMRQQVQKLAFELQVRGLMN 827

Query: 926  CQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPK 985
             Q+A+  + +VYL+E NPRA+RTVPFVSKA G PLAK AA VM+GKSL + G TKEVIP 
Sbjct: 828  VQFAVKNN-EVYLIEVNPRAARTVPFVSKATGVPLAKVAARVMAGKSLAEQGVTKEVIPP 886

Query: 986  HVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVF 1045
            + SVKE VLPF KF G D LLGPEMRSTGEVMG+  +F  AFAKAQ+ +   +   G   
Sbjct: 887  YYSVKEVVLPFNKFPGVDPLLGPEMRSTGEVMGVGRTFAEAFAKAQLGSNSTMKKHGRAL 946

Query: 1046 LSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVA 1105
            LS+ +  K  +  +A   L  GF++ +T GTA  L   GI    V K+HEGRPH  D + 
Sbjct: 947  LSVREGDKERVVDLAAKLLKQGFELDATHGTAIVLGEAGINPRLVNKVHEGRPHIQDRIK 1006

Query: 1106 NGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRS 1156
            NG+   ++ T+SG    + D   +RR  L YKV   TT++G  A A A+ +
Sbjct: 1007 NGEYTYIINTTSGRRAIE-DSRVIRRSALQYKVHYDTTLNGGFATAMALNA 1056


>gi|145589201|ref|YP_001155798.1| carbamoyl phosphate synthase large subunit [Polynucleobacter
            necessarius subsp. asymbioticus QLW-P1DMWA-1]
 gi|145047607|gb|ABP34234.1| carbamoyl-phosphate synthase large subunit [Polynucleobacter
            necessarius subsp. asymbioticus QLW-P1DMWA-1]
          Length = 1087

 Score = 1226 bits (3172), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 621/1075 (57%), Positives = 784/1075 (72%), Gaps = 32/1075 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KR+D++ ILI+GAGPIVIGQACEFDYSG QACKAL++EGY+VIL+NSNPATIMTDP +AD
Sbjct: 3    KRSDIKSILIIGAGPIVIGQACEFDYSGAQACKALRDEGYKVILVNSNPATIMTDPEMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+T E+VE+++  E+PDA+LPTMGGQTALN A+ L   G LEKYG ELIGA  +A
Sbjct: 63   VTYIEPITWEVVERIIAAEKPDAILPTMGGQTALNCALDLHRHGVLEKYGCELIGASPEA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGE------FPLIIRPAFTLG 261
            I KAEDR  FK AM  IG+ +  SGI +++DE   +   I +      FP++IRP+FT+G
Sbjct: 123  IDKAEDRQKFKNAMTKIGLGSAKSGIAHSMDEAHEVQQHIQQETGSSGFPVVIRPSFTMG 182

Query: 262  GTGGGIAYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIE 321
            G+GGGIAYN+EEFE ICK GL  S T ++L+E+SLLGWKE+E+EV+RD  DN +I+CSIE
Sbjct: 183  GSGGGIAYNREEFEEICKRGLDLSPTRELLIEESLLGWKEFEMEVVRDRNDNCIIVCSIE 242

Query: 322  NVDPMGVHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEV 381
            N+DPMGVHTGDSITVAPAQTLTDKEYQ +R+ SIA++REIGV+ GGSNVQF++NPVDG +
Sbjct: 243  NLDPMGVHTGDSITVAPAQTLTDKEYQIMRNASIAVLREIGVDTGGSNVQFSINPVDGRM 302

Query: 382  MVIEMNPRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYV 440
            +VIEMNPRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT   TPASFEPSIDYV
Sbjct: 303  IVIEMNPRVSRSSALASKATGFPIAKIAAKLAVGYTLDELKNDITGGATPASFEPSIDYV 362

Query: 441  VTKIPRFAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVK 500
            VTKIPRFAFEKFP ++  LTTQMKSVGE MA+GRTFQESFQKALR LE G  G     + 
Sbjct: 363  VTKIPRFAFEKFPQADSRLTTQMKSVGEVMAIGRTFQESFQKALRGLEVGVDG-----LD 417

Query: 501  ELDWDWEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQF 560
            E+  D + +   +  P PDR+  +  A + GM +DEI+  + +D WFL Q +ELI +E  
Sbjct: 418  EVSTDLDDIIQEINEPGPDRIWYLADAFRMGMGLDEIYSETKVDPWFLEQIEELITIETE 477

Query: 561  LLTQSVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAE 620
            L  + + +++  +   VK++GFSD+++A         VR  R  L V+P YKRVDTCAAE
Sbjct: 478  LKQRKIDSLSAPELRAVKQKGFSDRRLAKLLGVDASSVRAARHRLKVVPVYKRVDTCAAE 537

Query: 621  FEANTPYMYSSYDF---ECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAG 677
            F  NT YMYS+Y+    ECES PT K K+++LGGGPNRIGQGIEFDYCC H + +++  G
Sbjct: 538  FSTNTAYMYSTYEAEHGECESRPTNKDKIMVLGGGPNRIGQGIEFDYCCVHAALAMRDDG 597

Query: 678  YETIMMNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLP 737
            YETIM+N NPETVSTDYDTSDRLYFEPLT+EDVL ++  E+P+G+IVQ+GGQTPLKL+L 
Sbjct: 598  YETIMVNCNPETVSTDYDTSDRLYFEPLTLEDVLEIVAKEKPKGVIVQYGGQTPLKLALD 657

Query: 738  IHQYLDEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEAD 797
                L+ + +P         I GTSPD IDAAEDRERF  ++++L + QP    A++E +
Sbjct: 658  ----LERNGVP---------IIGTSPDMIDAAEDRERFQKLLQDLGLRQPPNRTARTEEE 704

Query: 798  ALAIAKEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAI 857
            AL +A+EIGYP+VVRPSYVLGGRAMEIV+    L  Y+  AV+V  + PVL+D++L+DAI
Sbjct: 705  ALKLAEEIGYPLVVRPSYVLGGRAMEIVHDGRDLERYMREAVKVSHDSPVLLDRFLNDAI 764

Query: 858  EIDVDALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKR 917
            E DVD ++D    V IGG+MEHIEQAGVHSGDSAC +P  ++S + ++ I   T  +AK 
Sbjct: 765  ECDVDCISDGT-KVFIGGVMEHIEQAGVHSGDSACSLPPYSLSDATVEEIKRQTAAMAKG 823

Query: 918  LNVCGLMNCQYAITTSGD---VYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLN 974
            L+V GLMN Q+AI        +Y+LE NPRASRTVPFVSKA G  LAK AA  M G++L 
Sbjct: 824  LHVIGLMNVQFAIQNVDGQDVIYVLEVNPRASRTVPFVSKATGLQLAKIAARCMVGQTLE 883

Query: 975  DLGFTKEVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAA 1034
              G   EV P + SVKEAV PF KF G D +LGPEMRSTGEVMG+  +F  A  K+Q+ A
Sbjct: 884  QQGIQAEVKPPYFSVKEAVFPFNKFPGIDPILGPEMRSTGEVMGVGKTFGEALFKSQLGA 943

Query: 1035 GQKLPLSGTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMH 1094
            G KLP SGTV L++ D  KP    +AK    +GF +V+T GTA  +E  G+ V+ V K+ 
Sbjct: 944  GIKLPKSGTVLLTVKDSDKPKAVEVAKLLHQLGFPMVATKGTAAAIEAAGLPVKLVNKVK 1003

Query: 1095 EGRPHAGDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALA 1149
            +GRPH  D + NG+I ++  T         D   +R    A  V   TT+S A A
Sbjct: 1004 DGRPHIVDFIKNGEISLVFTTVDETRTAIADSRSIRTSAQANGVTYYTTISAARA 1058


>gi|91201194|emb|CAJ74254.1| strongly similar to carbamoyl-phosphate synthase
            (glutamine-hydrolyzing) [Candidatus Kuenenia
            stuttgartiensis]
          Length = 1091

 Score = 1226 bits (3172), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 637/1105 (57%), Positives = 804/1105 (72%), Gaps = 41/1105 (3%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KR D+ KILI+G+GPIVIGQACEFDYSGTQAC AL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRNDIEKILIIGSGPIVIGQACEFDYSGTQACHALREEGYTVILVNSNPATIMTDPEVAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
            +TYI P+T E++ +++EKERP A+LPT+GGQT LN AV+LAE G L+K+ VELIGAKL A
Sbjct: 63   KTYIEPITTEIITKIIEKERPQAILPTLGGQTGLNAAVSLAEKGVLDKFNVELIGAKLKA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            IK AEDR  FK AM  IGV+ P S   N+LD  + I + IG FP IIR +FTLGG+GG  
Sbjct: 123  IKMAEDRSQFKAAMGRIGVQVPESVYVNSLDTALKIIDAIG-FPAIIRASFTLGGSGGST 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN EE++     GL  S   +VLVE+S+LGWKEYELEVMRDL DNVVIICSIEN DPMG
Sbjct: 182  AYNIEEYKEYITTGLETSPIHEVLVERSVLGWKEYELEVMRDLKDNVVIICSIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTD EYQ++RD ++ IIREIGVE GGSN+QFAVNP +GE++ IEMN
Sbjct: 242  VHTGDSITVAPAQTLTDMEYQKMRDAAVRIIREIGVETGGSNIQFAVNPENGEMLAIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRF 447
            PRVSRSSALASKATGFPIAK+AAKL++GY+LD+IPNDIT+ TPA FEP+IDY V KIPRF
Sbjct: 302  PRVSRSSALASKATGFPIAKIAAKLAIGYTLDEIPNDITRYTPACFEPAIDYCVVKIPRF 361

Query: 448  AFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWG---CSNVKELDW 504
             F+KFP +   LT  MKSVGE MA+GRTF+E+  KA+RSLE G SG+     S +   DW
Sbjct: 362  NFDKFPDTIQELTIHMKSVGEVMAIGRTFKEAVGKAIRSLETGRSGFDPLLPSGID--DW 419

Query: 505  DWEQ----LKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQF 560
              EQ    L+  L  P PDR+  I  A + GM +DEI+  S IDKWFL   K++ D+E  
Sbjct: 420  TAEQKSEYLQMKLITPTPDRLWHIADAFRLGMTLDEIYTYSRIDKWFLYNIKQITDLENE 479

Query: 561  LLTQSVSNMTKD--------DFY-------EVKRRGFSDKQIAFATKSTEKEVREKRLSL 605
            +  + +    KD        DF        + K+ GFSD  +A    S EK +RE R   
Sbjct: 480  IKQRHLMVKLKDNDASQKNRDFVMNAELLAKAKQYGFSDIFLARLCGSDEKTIREYRYRT 539

Query: 606  GVIPSYKRVDTCAAEFEANTPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYC 665
             V P +K VDTCAAEF+A TPY+YS+Y+  CE+ PT K+K++ILG GPNRIGQGIEFDYC
Sbjct: 540  SVRPVFKHVDTCAAEFKAFTPYLYSTYETSCEADPTTKRKIIILGSGPNRIGQGIEFDYC 599

Query: 666  CCHTSFSLQSAGYETIMMNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQ 725
            C H  ++L+  GYETIM+N NPETVSTDYDTSDRLYFEPLT+EDVL +I  E+PEG+IVQ
Sbjct: 600  CVHGVYALKELGYETIMVNCNPETVSTDYDTSDRLYFEPLTMEDVLEIIHKEKPEGVIVQ 659

Query: 726  FGGQTPLKLSLPIHQYLDEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIE 785
            FGGQTPLKL++P+ +            +G V+I GTSP++ID AEDRERF  ++  L ++
Sbjct: 660  FGGQTPLKLAVPLEK------------EG-VKILGTSPENIDVAEDRERFALLMNRLGLK 706

Query: 786  QPKGGIAKSEADALAIAKEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPER 845
            QP+ G A S  DA  IAK IGYPV++RPSYVLGG AM IVY ++ L  Y+ +AVEV  E 
Sbjct: 707  QPENGCANSAEDAKMIAKRIGYPVLLRPSYVLGGSAMRIVYDEQGLEHYISHAVEVSHEH 766

Query: 846  PVLIDKYLSDAIEIDVDALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLD 905
            PVLID +L DAIEIDVDA++D    V IGG+MEHIE+AGVHSGDSAC +P  ++++  ++
Sbjct: 767  PVLIDSFLQDAIEIDVDAISDG-EEVFIGGVMEHIEEAGVHSGDSACSLPPYSVNNEIIE 825

Query: 906  TISSWTIKLAKRLNVCGLMNCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAA 965
             +   T  +A  LNV GL+N QYA+     +Y+LE NPRASRT+PFVSKAIG P+AK AA
Sbjct: 826  ELKKETRIIALALNVIGLINIQYAVKDKV-IYVLEVNPRASRTIPFVSKAIGVPMAKIAA 884

Query: 966  LVMSGKSLNDLGFTKEVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPI 1025
             V++G+ L  L   + +  +H +VKEAV PF KF+G D LLGPEM+STGEVMG+D  F  
Sbjct: 885  KVIAGEKLRGLNMPENITMRHTAVKEAVFPFLKFKGVDTLLGPEMKSTGEVMGLDKDFGR 944

Query: 1026 AFAKAQIAAGQKLPLSGTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGI 1085
            A+AKAQ++A   LPL G+VF+S+ D  K  + +IAK  L +GFKI +T GTA  L  + I
Sbjct: 945  AYAKAQMSANYCLPLVGSVFISVRDKDKKPIVQIAKKLLQMGFKITATKGTAAALSEENI 1004

Query: 1086 AVERVLKMHEGRPHAGDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVS 1145
            +V  VLK+ EGRP+  D + N ++Q+++ T+ G +  Q     +RR  L Y++P  TTV+
Sbjct: 1005 SVTPVLKVIEGRPNIVDHIKNNEVQLVINTAEGKAA-QEASFSIRRTALTYQIPYFTTVA 1063

Query: 1146 GALANAEAIRSLKSNTVTMTALQDF 1170
            GA+A   AI +LKS T+ + ++Q++
Sbjct: 1064 GAVAAVRAIEALKSGTLDVRSIQEY 1088


>gi|209694178|ref|YP_002262106.1| carbamoyl phosphate synthase large subunit [Aliivibrio salmonicida
            LFI1238]
 gi|208008129|emb|CAQ78271.1| carbamoyl-phosphate synthase large chain [Aliivibrio salmonicida
            LFI1238]
          Length = 1076

 Score = 1226 bits (3172), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 616/1080 (57%), Positives = 782/1080 (72%), Gaps = 24/1080 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ +LILGAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIKSVLILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPDMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  E+V  ++EKERPDA+LPTMGGQTALN A+ L   G L ++GVE+IGA  DA
Sbjct: 63   ATYIEPIHWEVVRNIIEKERPDAVLPTMGGQTALNCALDLERHGVLAEFGVEMIGATADA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  F +AMK+IG++ P +    T++E   + + +G FP IIRP+FT+GGTGGGI
Sbjct: 123  IDKAEDRSRFDKAMKSIGLECPNADTAKTMEEAYKVLDMVG-FPCIIRPSFTMGGTGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYNKEEFE IC+ GL  S T+++L+++SL+GWKEYE+EV+RD  DN +I+C+IEN D MG
Sbjct: 182  AYNKEEFEEICRGGLDLSPTNELLIDESLIGWKEYEMEVVRDKNDNCIIVCTIENFDAMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            +HTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGVE GGSNVQF +NP DG ++VIEMN
Sbjct: 242  IHTGDSITVAPAQTLTDKEYQLMRNASLAVLREIGVETGGSNVQFGINPKDGRMVVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL++GY+LD++ NDIT   TPASFEP+IDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKIAAKLAIGYTLDELMNDITGGATPASFEPTIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWD- 505
            F FEKF G+   LTTQMKSVGE MA+GR  QES QKALR LE G  G+    + +LD   
Sbjct: 362  FNFEKFAGANDRLTTQMKSVGEVMAIGRNQQESLQKALRGLEVGADGF--DEMVDLDAPD 419

Query: 506  -WEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQ 564
               ++++ L+    +R+  I  A + GM +D +  L+ +D+WFL Q ++L+ +E  +   
Sbjct: 420  ALTKIRHELKDAGAERIWYIADAFRAGMSIDGVFNLTNVDRWFLVQIEDLVKMEAEVKAG 479

Query: 565  SVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEAN 624
              +++T D   ++KR+GF+D +++      E E+R  R    + P YKRVDTCAAEF ++
Sbjct: 480  GFASLTADSLRQLKRKGFADARLSKLLGVAESEIRRLRDQYDIHPVYKRVDTCAAEFSSD 539

Query: 625  TPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMN 684
            T YMYS+YD ECES PT   K++ILGGGPNRIGQGIEFDYCC H S +L+  GYETIM+N
Sbjct: 540  TAYMYSTYDEECESNPTDNDKIMILGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVN 599

Query: 685  SNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDE 744
             NPETVSTDYDTSDRLYFEP+T+EDVL ++ +E+P+G+IVQ+GGQTPLKL+         
Sbjct: 600  CNPETVSTDYDTSDRLYFEPVTLEDVLAIVRIEKPKGVIVQYGGQTPLKLA--------- 650

Query: 745  HRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKE 804
             R   A+G   V I GTSPD+ID AEDRERF   +  L + QP+     +   A+  ++E
Sbjct: 651  -RALEAAG---VPIIGTSPDAIDRAEDRERFQVAVDRLGLLQPENATVTAMEQAIEKSRE 706

Query: 805  IGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDAL 864
            IG+P+VVRPSYVLGGRAMEIVY ++ L  Y   AV V  E PVL+D +L DAIE+DVDA+
Sbjct: 707  IGFPLVVRPSYVLGGRAMEIVYDEQDLRRYFNEAVSVSNESPVLLDSFLDDAIEVDVDAI 766

Query: 865  ADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLM 924
             D    VVI GIMEHIEQAGVHSGDSAC +P  T+S    D +     KLA  L V GLM
Sbjct: 767  CDG-EQVVIAGIMEHIEQAGVHSGDSACSLPAYTLSEEIQDVMRDQVRKLAFELGVRGLM 825

Query: 925  NCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIP 984
            N Q+A+  + +VYL+E NPRA+RT+PFVSKA G P+AK AA VM+G+SL   GFTKE+IP
Sbjct: 826  NTQFAVKNN-EVYLIEVNPRAARTIPFVSKATGAPIAKIAARVMAGQSLESQGFTKEIIP 884

Query: 985  KHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTV 1044
             + SVKE VLPF KF G D LLGPEMRSTGEVMG+  +F  AFAKA++   ++ P  G  
Sbjct: 885  PYYSVKEVVLPFNKFPGVDPLLGPEMRSTGEVMGVGNTFAEAFAKAELGCSKEYPEGGRA 944

Query: 1045 FLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMV 1104
             LS+ D  K  +  +AK  + IG+++ +T GTA  L   GI    V K+HEGRPH  D +
Sbjct: 945  LLSVRDGDKKRVVDLAKHLVKIGYQLDATHGTAVILGEAGINPRLVNKVHEGRPHILDRI 1004

Query: 1105 ANGQIQMMVITSSGDSLDQIDGLKLRRRG-LAYKVPVITTVSGALANAEAIRSLKSNTVT 1163
             NG+   +V T+SG     I+  KL RRG LA KV   TT++ A A+  A  +   NT+ 
Sbjct: 1005 KNGEYTYIVNTASGRQ--AIEDSKLLRRGALAGKVNYTTTLNAAFASCLAHEADDRNTIN 1062


>gi|386827602|ref|ZP_10114709.1| carbamoyl-phosphate synthase, large subunit [Beggiatoa alba B18LD]
 gi|386428486|gb|EIJ42314.1| carbamoyl-phosphate synthase, large subunit [Beggiatoa alba B18LD]
          Length = 1081

 Score = 1226 bits (3172), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 620/1088 (56%), Positives = 801/1088 (73%), Gaps = 24/1088 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD+  ILI+GAGPI+IGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIHSILIIGAGPIIIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPDMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  + V +++EKERPDALLPTMGGQTALN A+ L++ G L +Y VE+IGAK +A
Sbjct: 63   ATYIEPIEWQTVARIIEKERPDALLPTMGGQTALNCALELSKHGVLAQYNVEMIGAKEEA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR+ F+ AMK IG+ TP S + +T++E  +    +G FP +IRP+FTLGG+GGGI
Sbjct: 123  IDKAEDREKFRDAMKKIGLDTPRSSVAHTMEEAFAAQASVG-FPTVIRPSFTLGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEF  IC+ G   S   Q+L+E+S LGWKEYE+EV+RD  DN +I+CSIEN+DPMG
Sbjct: 182  AYNREEFVTICERGFDLSPVHQLLIEESALGWKEYEMEVVRDSKDNCIIVCSIENLDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            +HTGDSITVAP QTLTDKEYQ +RD S+A++REIGV+ GGSNVQFA++P +G +++IEMN
Sbjct: 242  IHTGDSITVAPIQTLTDKEYQIMRDASLAVLREIGVDTGGSNVQFAIDPKNGRMIIIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITK-KTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIA++AAKL++GY+LD++ N+IT   TPASFEP+IDYVVTK+PR
Sbjct: 302  PRVSRSSALASKATGFPIARVAAKLAIGYTLDELANEITGGATPASFEPTIDYVVTKVPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            F FEKFP +EPLLTTQMKSVGE MA+GRTFQES QKALR LE G  G       +L+ D 
Sbjct: 362  FTFEKFPQAEPLLTTQMKSVGEVMAIGRTFQESLQKALRGLETGMCGLDEHLDPQLEPDS 421

Query: 507  ----EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLL 562
                + L++ L+   P+R+  +  A + G  +D+++E + ID WFLTQ  ++ID E  + 
Sbjct: 422  NASKDVLRHELQEAGPERLWYVADAFRAGWTIDDVYEHTTIDPWFLTQIADIIDEEAEVK 481

Query: 563  TQSVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFE 622
             +    +T +   E+KR+GFSDK++A  T + E+++RE R    + P YKRVD+CAAEF 
Sbjct: 482  AEGFDCLTPERLRELKRKGFSDKRLAILTNTAEQDIRELRHRYKIRPVYKRVDSCAAEFT 541

Query: 623  ANTPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIM 682
            A T YMYS+Y+ ECES PTQ++K+++LGGGPNRIGQGIEFDYCC   + +L++ GYETIM
Sbjct: 542  ATTAYMYSTYEEECESNPTQREKIMVLGGGPNRIGQGIEFDYCCVQAALALRADGYETIM 601

Query: 683  MNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYL 742
            +N NPETVSTDYDTSDRLYFEPLT+EDVL +I +E P+GIIVQ+GGQTPLKL+ P+    
Sbjct: 602  VNCNPETVSTDYDTSDRLYFEPLTLEDVLEIIAVENPKGIIVQYGGQTPLKLAKPLE--- 658

Query: 743  DEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIA 802
                   A+G  ++   GT+PDSID AEDRERF  ++ +L++ QP    A++   AL +A
Sbjct: 659  -------AAGAPII---GTTPDSIDLAEDRERFQQLVNQLNLRQPPNRTARNAEVALKLA 708

Query: 803  KEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVD 862
             EIGYP+VVRPSYVLGGRAMEIVY  + L  Y++ AV V  + PVL+D++L +AIE+DVD
Sbjct: 709  DEIGYPLVVRPSYVLGGRAMEIVYHPDDLKRYMQTAVSVSNDSPVLLDRFLDEAIEVDVD 768

Query: 863  ALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCG 922
            A+ D   +V+IGGIMEHIE+AGVHSGDSAC +P   +S    D + +  I +AK LNV G
Sbjct: 769  AVCDG-EHVLIGGIMEHIEEAGVHSGDSACSLPPYGLSPMLQDQLRAQMISMAKALNVVG 827

Query: 923  LMNCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEV 982
            L+N Q+AI     +Y+LE NPRASRTVPFVSKA G PLA+ AA  M G+ L + GFT+E 
Sbjct: 828  LVNAQFAIQNQ-TIYVLEVNPRASRTVPFVSKATGLPLARIAARCMVGRKLAEQGFTQEC 886

Query: 983  IPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSG 1042
            IP + SVKEAV PF KF G D LLGPEM+STGEVMG+  SF  AFAK+Q+AAG  LP SG
Sbjct: 887  IPSYYSVKEAVFPFVKFAGVDPLLGPEMKSTGEVMGVGRSFGEAFAKSQLAAGLNLPRSG 946

Query: 1043 TVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGD 1102
              F+S+ +  K     +++  L +GF+IV+T GTA  L   G+    V K+ EGRPH  D
Sbjct: 947  RAFISVRETDKQAAVDVSRDLLSLGFEIVATRGTAKALRDAGVTCTTVNKVIEGRPHIVD 1006

Query: 1103 MVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTV 1162
             + N +I +++ T+ G      D   +RR  L +KV   TT++GA A   A++  +S  V
Sbjct: 1007 SIKNEEISLIINTTEGKQAIS-DSFTIRRTALQHKVTYTTTMAGARAMVLALKVSQSGEV 1065

Query: 1163 TMTALQDF 1170
                LQD 
Sbjct: 1066 NR--LQDL 1071



 Score =  239 bits (609), Expect = 8e-60,   Method: Compositional matrix adjust.
 Identities = 156/455 (34%), Positives = 247/455 (54%), Gaps = 30/455 (6%)

Query: 58  RSRVRASSAKIDS-SAELSNGAA----SSKDQKLGKRTDLRKILILGAGPIVIGQACEFD 112
           R ++R    ++DS +AE +   A    + +++     T   KI++LG GP  IGQ  EFD
Sbjct: 523 RYKIRPVYKRVDSCAAEFTATTAYMYSTYEEECESNPTQREKIMVLGGGPNRIGQGIEFD 582

Query: 113 YSGTQACKALKEEGYEVILINSNPATIMTDPGLADRTYITPMTPELVEQVLEKERPDALL 172
           Y   QA  AL+ +GYE I++N NP T+ TD   +DR Y  P+T E V +++  E P  ++
Sbjct: 583 YCCVQAALALRADGYETIMVNCNPETVSTDYDTSDRLYFEPLTLEDVLEIIAVENPKGII 642

Query: 173 PTMGGQTALNLAVALAESGALEKYGVELIGAKLDAIKKAEDRDLFKQAMKTIGVKTPPSG 232
              GGQT L LA        LE  G  +IG   D+I  AEDR+ F+Q +  + ++ PP+ 
Sbjct: 643 VQYGGQTPLKLA------KPLEAAGAPIIGTTPDSIDLAEDRERFQQLVNQLNLRQPPNR 696

Query: 233 IGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGIAYNKEEFEAICKAGLAASLTSQVLV 292
                +  + +A+EIG +PL++RP++ LGG    I Y+ ++ +   +  ++ S  S VL+
Sbjct: 697 TARNAEVALKLADEIG-YPLVVRPSYVLGGRAMEIVYHPDDLKRYMQTAVSVSNDSPVLL 755

Query: 293 EKSLLGWKEYELEVMRDLADNVVIICSIENVDPMGVHTGDSITVAPAQTLTDKEYQRLRD 352
           ++ L    E +++ + D  ++V+I   +E+++  GVH+GDS    P   L+     +LR 
Sbjct: 756 DRFLDEAIEVDVDAVCD-GEHVLIGGIMEHIEEAGVHSGDSACSLPPYGLSPMLQDQLRA 814

Query: 353 YSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMNPRVSRSSALASKATGFPIAKMAAKL 412
             I++ + + V  G  N QFA+   +  + V+E+NPR SR+    SKATG P+A++AA+ 
Sbjct: 815 QMISMAKALNV-VGLVNAQFAIQ--NQTIYVLEVNPRASRTVPFVSKATGLPLARIAARC 871

Query: 413 SVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRFAFEKFPGSEPLLTTQMKSVGEAMAL 472
            VG  L +     T++   S      Y   K   F F KF G +PLL  +MKS GE M +
Sbjct: 872 MVGRKLAE--QGFTQECIPS------YYSVKEAVFPFVKFAGVDPLLGPEMKSTGEVMGV 923

Query: 473 GRTFQESFQKALRSLECGF----SGWGCSNVKELD 503
           GR+F E+F K+   L  G     SG    +V+E D
Sbjct: 924 GRSFGEAFAKS--QLAAGLNLPRSGRAFISVRETD 956


>gi|445169055|ref|ZP_21395072.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Enteritidis str. SE8a]
 gi|444863885|gb|ELX88699.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Enteritidis str. SE8a]
          Length = 1075

 Score = 1226 bits (3172), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 616/1078 (57%), Positives = 784/1078 (72%), Gaps = 19/1078 (1%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILILGAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  E+V +++EKERPDA+LPTMGGQTALN A+ L   G LE++GV +IGA  DA
Sbjct: 63   ATYIEPIHWEVVRKIIEKERPDAVLPTMGGQTALNCALELERQGVLEEFGVTMIGATADA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  F  AMK IG+ T  SGI +T++E +++A ++G FP IIRP+FT+GGTGGGI
Sbjct: 123  IDKAEDRRRFDIAMKKIGLDTARSGIAHTMEEALAVAADVG-FPCIIRPSFTMGGTGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEFE IC+ GL  S T+++L+++SL+GWKEYE+EV+RD  DN +I+CSIEN D MG
Sbjct: 182  AYNREEFEEICERGLDLSPTNELLIDESLIGWKEYEMEVVRDKNDNCIIVCSIENFDAMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            +HTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGVE GGSNVQFAVNP +G ++VIEMN
Sbjct: 242  IHTGDSITVAPAQTLTDKEYQIMRNASMAVLREIGVETGGSNVQFAVNPKNGRLIVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT  +TPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGYTLDELMNDITGGRTPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            F FEKF G+   LTTQMKSVGE MA+GRT QES QKALR LE G +G+      +     
Sbjct: 362  FNFEKFAGANDRLTTQMKSVGEVMAIGRTQQESLQKALRGLEVGATGFDPKVSLDDPEAL 421

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
             +++  L+    DR+  I  A + G+ VD +  L+ ID+WFL Q +EL+ +E+ +    +
Sbjct: 422  TKIRRELKDAGADRIWYIADAFRAGLSVDGVFNLTNIDRWFLVQIEELVRLEEKVAEVGI 481

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
            + +  D   ++KR+GF+D ++A      E E+R+ R    + P YKRVDTCAAEF  +T 
Sbjct: 482  TGLNADFLRQLKRKGFADARLAKLAGVREAEIRKLRDQYDLHPVYKRVDTCAAEFATDTA 541

Query: 627  YMYSSYDFECESAPT-QKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNS 685
            YMYS+Y+ ECE+ P+  + K+++LGGGPNRIGQGIEFDYCC H S +L+  GYETIM+N 
Sbjct: 542  YMYSTYEDECEANPSVDRDKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVNC 601

Query: 686  NPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEH 745
            NPETVSTDYDTSDRLYFEP+T+EDVL ++ +E+P+G+IVQ+GGQTPLKL+          
Sbjct: 602  NPETVSTDYDTSDRLYFEPVTLEDVLEIVRIEKPKGVIVQYGGQTPLKLA---------- 651

Query: 746  RLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEI 805
            R   A+G   V + GTSPD+ID AEDRERF   +  L ++QP      +   A+  AKEI
Sbjct: 652  RALEAAG---VPVIGTSPDAIDRAEDRERFQHAVDRLKLKQPANATVTAIEQAVEKAKEI 708

Query: 806  GYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALA 865
            GYP+VVRPSYVLGGRAMEIVY +  L  Y + AV V  + PVL+D++L DA+E+DVDA+ 
Sbjct: 709  GYPLVVRPSYVLGGRAMEIVYDEADLRRYFQTAVSVSNDAPVLLDRFLDDAVEVDVDAIC 768

Query: 866  DSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMN 925
            D    V+IGGIMEHIEQAGVHSGDSAC +P  T+S    D +     KLA  L V GLMN
Sbjct: 769  DG-EMVLIGGIMEHIEQAGVHSGDSACSLPAYTLSQEIQDVMRQQVQKLAFELQVRGLMN 827

Query: 926  CQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPK 985
             Q+A+  + +VYL+E NPRA+RTVPFV+KA G PLAK AA VM+GKSL + G T+E+IP 
Sbjct: 828  VQFAVKDN-EVYLIEVNPRAARTVPFVAKATGVPLAKVAARVMAGKSLTEQGVTQEIIPP 886

Query: 986  HVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVF 1045
            + SVKE VLPF KF G D LLGPEMRSTGEVMG+  +F  AFAKAQ+ +   +   G   
Sbjct: 887  YYSVKEVVLPFNKFPGVDPLLGPEMRSTGEVMGVGRTFAEAFAKAQLGSNSTMKKQGRAL 946

Query: 1046 LSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVA 1105
            LS+ +  K  +  +A   L  GF++ +T GTA  L   GI    V K+HEGRPH  D + 
Sbjct: 947  LSVREGDKERVVDLAAKLLKQGFELDATHGTAIVLGEAGINPRLVNKVHEGRPHIQDRIK 1006

Query: 1106 NGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTVT 1163
            NG+   ++ T++G    + D   +RR  L YKV   TT++G  A   A+ +  +  VT
Sbjct: 1007 NGEYTYIINTTAGRRAIE-DSRVIRRSALQYKVHYDTTLNGGFATTMALNADATEKVT 1063


>gi|451945712|ref|YP_007466307.1| carbamoyl-phosphate synthase, large subunit [Desulfocapsa sulfexigens
            DSM 10523]
 gi|451905060|gb|AGF76654.1| carbamoyl-phosphate synthase, large subunit [Desulfocapsa sulfexigens
            DSM 10523]
          Length = 1078

 Score = 1226 bits (3171), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 627/1085 (57%), Positives = 809/1085 (74%), Gaps = 19/1085 (1%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++KILI+G+GPI+I QACEFDYSG QA KALKEEGYEV+LINSNPATIMTDP LAD
Sbjct: 3    KRTDIKKILIIGSGPIIISQACEFDYSGAQAVKALKEEGYEVVLINSNPATIMTDPELAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+TPE+V +V+EKERPDALLPT+GGQTALN A+ +AE GALEKY VE++ A +  
Sbjct: 63   FTYIEPITPEMVIKVIEKERPDALLPTLGGQTALNTAIKVAELGALEKYNVEMLAANIAV 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            IKKAE R+ FK+AM+ IG+  P S I +TL+  +   ++IG FP+I+RP+FTLGGTGGG+
Sbjct: 123  IKKAEGREEFKEAMENIGLNVPKSHIVHTLEAAMQAGDDIG-FPVIVRPSFTLGGTGGGV 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN++E + +  +GL  S+TS++++E+SLLGWKEYELE+MRD  DNVV+ICSIEN+D MG
Sbjct: 182  AYNRQELKDLASSGLDLSMTSEIMLERSLLGWKEYELELMRDSKDNVVVICSIENIDAMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTD+EYQ +RD SIAIIREIGVE GGSNVQFAVNPVDGE+MVIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDREYQNMRDASIAIIREIGVETGGSNVQFAVNPVDGELMVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRF 447
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT++T A+FEP+IDY V KIPR+
Sbjct: 302  PRVSRSSALASKATGFPIAKIAAKLAVGYTLDELKNDITRETYAAFEPTIDYCVVKIPRW 361

Query: 448  AFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKEL-DWDW 506
             FEKFP +E +L+T MKSVGE MA+GRTF+E+FQK +RSLE G  G+G    + L   + 
Sbjct: 362  TFEKFPEAEDVLSTAMKSVGETMAIGRTFKEAFQKGMRSLETGRFGFGGDGKEVLTHLEL 421

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
            E L+  LR PN  R+  I+ A+K+G  ++ + EL++ID WFL  F++++  E  +L +  
Sbjct: 422  EDLEAGLRKPNSKRISYIHEALKRGTSIERLFELTYIDPWFLYNFQQIVVKENDILEKGF 481

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
              +T +     K  GFSD Q+AF T ++  +VRE R +L + P YK VDTCAAEFE+ TP
Sbjct: 482  KGLTPEFLRSCKEYGFSDHQLAFLTGTSNGDVRELRKTLEIEPVYKLVDTCAAEFESYTP 541

Query: 627  YMYSSYDFECE-SAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNS 685
            Y YS+Y+ E E SA T +KK++ILGGGPNRIGQGIEFDYCC H SF+L   G E+IM+NS
Sbjct: 542  YYYSTYEQENEASAVTDRKKIVILGGGPNRIGQGIEFDYCCVHASFALAEIGVESIMINS 601

Query: 686  NPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEH 745
            NPETVSTDYDTSD+LYFEPLT+EDVLN+IDLE+P+G+IVQFGGQTPL L++ + +     
Sbjct: 602  NPETVSTDYDTSDKLYFEPLTLEDVLNIIDLEKPDGVIVQFGGQTPLNLAVALEE----- 656

Query: 746  RLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEI 805
                  G   V I GT PDSID AEDR+RF   +++L + QP      +  +ALA+A +I
Sbjct: 657  -----QG---VTIVGTPPDSIDRAEDRKRFQQFLQKLGLRQPDNDTVFTVDEALAVANKI 708

Query: 806  GYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALA 865
             YPVVVRPSYVLGGR M IVY DE + +++        + PVLIDK+L DAIE+DVDAL 
Sbjct: 709  EYPVVVRPSYVLGGRDMRIVYNDEEIRSFMAIPGIAGSDHPVLIDKFLKDAIEVDVDALC 768

Query: 866  DSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMN 925
            D   + +IGGIM+HIE+AG+HSGDSAC++P  T+S+  +  I   +  +A  L V GLMN
Sbjct: 769  DG-EDTIIGGIMQHIEEAGIHSGDSACVLPPHTLSAEMIAEIKEASRAMALELGVIGLMN 827

Query: 926  CQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPK 985
             QYA+    D+Y+LE NPRASRTVPFVSKA G PLAK A  +M GK+L +LG T+EV+  
Sbjct: 828  VQYAV-KGDDLYILEVNPRASRTVPFVSKATGVPLAKVATKIMMGKTLKELGLTREVVID 886

Query: 986  HVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVF 1045
            H +VKEAV PF++F   D LLGPEM+STGEVMGID    +A AK Q+AAG +LP SGTVF
Sbjct: 887  HWAVKEAVFPFDRFDNVDTLLGPEMKSTGEVMGIDDDLGLALAKGQLAAGSRLPTSGTVF 946

Query: 1046 LSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVA 1105
            +S+ D  K  +   A+  +++ F+IV+T GTA FL+   IA  +V K+ +GRPH  D + 
Sbjct: 947  ISVRDGDKETILGPARTLVEMDFEIVATDGTAEFLQSHDIACRQVNKISQGRPHILDKMQ 1006

Query: 1106 NGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTVTMT 1165
            + Q+  +V TS G    + D   +RR  L   +P  TT +GA+A   A+++++   + + 
Sbjct: 1007 DNQVSWVVNTSMGKRTTE-DSYTIRRAALELHIPYTTTATGAVAVVMAMKAMREKEIGVQ 1065

Query: 1166 ALQDF 1170
             +Q F
Sbjct: 1066 PVQYF 1070


>gi|254482510|ref|ZP_05095749.1| carbamoyl-phosphate synthase, large subunit [marine gamma
            proteobacterium HTCC2148]
 gi|214037201|gb|EEB77869.1| carbamoyl-phosphate synthase, large subunit [marine gamma
            proteobacterium HTCC2148]
          Length = 1073

 Score = 1226 bits (3171), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 616/1072 (57%), Positives = 782/1072 (72%), Gaps = 30/1072 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILILGAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIQSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPTMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+    V +++E+E+PDALLPTMGGQTALN A+ LA  G L ++GVE+IGA  +A
Sbjct: 63   ATYIEPIEWRTVARIIEEEKPDALLPTMGGQTALNCALDLARHGVLAEHGVEMIGATKEA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I  AEDR LF +AMK IG+ TP + + +T++E   + + IG FP IIRP+FT+GG+GGGI
Sbjct: 123  IDMAEDRQLFDKAMKRIGLDTPRASLAHTMEEAFQVLDSIG-FPCIIRPSFTMGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN++EFE IC  GL  S T+++L+++SL+GWKEYE+EV+RD  DN +I+C+IEN D MG
Sbjct: 182  AYNRDEFEEICMRGLDLSPTNELLIDESLIGWKEYEMEVVRDKNDNCIIVCAIENFDAMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ +RD S+A++REIGVE GGSNVQF   P  G +++IEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQIMRDASLAVLREIGVETGGSNVQFGQCPDTGRLVIIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITK-KTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL++GY+LD++ NDIT   TPASFEP+IDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAIGYTLDELQNDITGGATPASFEPAIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            FAFEKF G++  LTTQMKSVGE MA+GRTFQES QKALR LE G SG+       +D D 
Sbjct: 362  FAFEKFKGADTRLTTQMKSVGEVMAIGRTFQESLQKALRGLEVGSSGFE----HMIDVDD 417

Query: 507  EQLKYSLRV----PNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLL 562
            E L+  L      P  +R+  I  A + GM VDEI++LS +D WFL Q +++I  E  L 
Sbjct: 418  EDLRDELLSELVNPTAERIWYIGDAFRAGMSVDEIYKLSGVDPWFLVQIEDIIKTENSLK 477

Query: 563  TQSVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFE 622
            +  + ++  D  + +KR+GFSD+++A    S E  VR  R  LG+ P YKRVDTCAAEF 
Sbjct: 478  SIELDDIGADQMFRLKRKGFSDERLAVLLASDEHIVRRHRHGLGIKPVYKRVDTCAAEFA 537

Query: 623  ANTPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIM 682
            + T YMYS+Y+ ECE+AP+ + K+L+LGGGPNRIGQGIEFDYCC H   +++  GYETIM
Sbjct: 538  SATAYMYSTYEEECEAAPSDRDKILVLGGGPNRIGQGIEFDYCCVHAVLAMREDGYETIM 597

Query: 683  MNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYL 742
            +N NPETVSTDYDTSDRLYFEP+T+EDVL ++ LE+P+G+IVQFGGQTPLKL+  +    
Sbjct: 598  VNCNPETVSTDYDTSDRLYFEPVTLEDVLEIVALEKPKGVIVQFGGQTPLKLARALE--- 654

Query: 743  DEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIA 802
                      D  V I GT+PD+ID AEDRERF  +I++L ++QP     +S  +A+  A
Sbjct: 655  ----------DAGVPIIGTTPDAIDRAEDRERFQHMIQKLGLKQPANTTVRSTEEAVEAA 704

Query: 803  KEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVD 862
              IGYP+VVRPSYVLGGRAMEIVY +E L+ Y+++AV+   + PVL+D +LS AIEID+D
Sbjct: 705  ASIGYPLVVRPSYVLGGRAMEIVYREEDLLRYMKHAVQASDDAPVLLDSFLSAAIEIDID 764

Query: 863  ALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCG 922
            A++D    VVIG IM+HIEQAGVHSGDSAC +P  ++     D +     ++A  L V G
Sbjct: 765  AVSDG-EEVVIGAIMQHIEQAGVHSGDSACSLPPYSLDMVVQDQMREQVKQMALELGVRG 823

Query: 923  LMNCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEV 982
            LMN Q A     ++Y++E NPRASRTVPFVSK IG  LA+ AA  M+G+SL   GF KE+
Sbjct: 824  LMNVQLAWQDD-EIYVIEVNPRASRTVPFVSKCIGRSLAQVAARCMAGQSLASQGFNKEI 882

Query: 983  IPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSG 1042
            +P + SVKEAVLPF KF G D +LGPEMRSTGEVMG+  SF  AFAKAQ+  G   P SG
Sbjct: 883  VPPYYSVKEAVLPFNKFPGVDPILGPEMRSTGEVMGVGDSFATAFAKAQLGGGDSPPTSG 942

Query: 1043 TVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGD 1102
            TV +S+ D+ KP    +A+  L +GF + +T GTA  LE  G+ V R+ K+ EGRPH  D
Sbjct: 943  TVLISVRDVDKPGAVAVARDLLGLGFSLAATGGTATALEAAGLNVRRINKVLEGRPHIVD 1002

Query: 1103 MVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAI 1154
            M+ N +   ++ T+ G    + D   +R    A++V   TT    LA AEAI
Sbjct: 1003 MIKNDEADFIINTTEGRRAIE-DSAPIRASAQAHRVFYTTT----LAAAEAI 1049


>gi|418260746|ref|ZP_12883217.1| carB [Shigella flexneri 6603-63]
 gi|425425755|ref|ZP_18806840.1| carbamoyl-phosphate synthase large chain [Escherichia coli 0.1304]
 gi|397893399|gb|EJL09859.1| carB [Shigella flexneri 6603-63]
 gi|408353555|gb|EKJ67050.1| carbamoyl-phosphate synthase large chain [Escherichia coli 0.1304]
          Length = 1073

 Score = 1226 bits (3171), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 618/1071 (57%), Positives = 782/1071 (73%), Gaps = 19/1071 (1%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILILGAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  E+V +++EKERPDA+LPTMGGQTALN A+ L   G LE++GV +IGA  DA
Sbjct: 63   ATYIEPIHWEVVRKIIEKERPDAVLPTMGGQTALNCALELERQGVLEEFGVTMIGATADA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  F  AMK IG++T  SGI +T++E +++A ++G FP IIRP+FT+GG+GGGI
Sbjct: 123  IDKAEDRRRFDVAMKKIGLETARSGIAHTMEEALAVAADVG-FPCIIRPSFTMGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEFE IC  GLA S T ++L+++SL+GWKEYE+EV+RD  DN +I+CSIEN D MG
Sbjct: 182  AYNREEFEEICARGLALSPTKELLIDESLIGWKEYEMEVVRDKNDNCIIVCSIENFDAMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            +HTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGVE GGSNVQFAVNP +G ++VIEMN
Sbjct: 242  IHTGDSITVAPAQTLTDKEYQIMRNASMAVLREIGVETGGSNVQFAVNPKNGRLIVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT  +TPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGYTLDELMNDITGGRTPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            F FEKF G+   LTTQMKSVGE MA+GRT QES QKALR LE G +G+      +     
Sbjct: 362  FNFEKFAGANDRLTTQMKSVGEVMAIGRTQQESLQKALRGLEVGATGFDPKVSLDDPEAL 421

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
             +++  L+    +R+  I  A + G+ VD +  L+ ID+WFL Q +EL+ +E+ +    +
Sbjct: 422  TKIRRELKDAGAERIWYIADAFRAGLSVDGVFNLTNIDRWFLVQIEELVRLEEKVAEVGI 481

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
            + +  +   ++KR+GF+D ++A      E E+R+ R    + P YKRVDTCAAEF  +T 
Sbjct: 482  TGLNAEFLRQLKRKGFADARLAKLAGVREAEIRKLRDQYDLHPVYKRVDTCAAEFATDTA 541

Query: 627  YMYSSYDFECESAP-TQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNS 685
            YMYS+Y+ ECE+ P T ++K+++LGGGPNRIGQGIEFDYCC H S +L+  GYETIM+N 
Sbjct: 542  YMYSTYEEECEANPSTDREKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVNC 601

Query: 686  NPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEH 745
            NPETVSTDYDTSDRLYFEP+T+EDVL ++ +E+P+G+IVQ+GGQTPLKL+          
Sbjct: 602  NPETVSTDYDTSDRLYFEPVTLEDVLEIVRIEKPKGVIVQYGGQTPLKLA---------- 651

Query: 746  RLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEI 805
            R   A+G   V + GTSPD+ID AEDRERF   +  L ++QP      +   A+  AKEI
Sbjct: 652  RALEAAG---VPVIGTSPDAIDRAEDRERFQHAVDRLKLKQPANATVTAIEMAVEKAKEI 708

Query: 806  GYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALA 865
            GYP+VVRPSYVLGGRAMEIVY +  L  Y + AV V  + PVL+D +L DA+E+DVDA+ 
Sbjct: 709  GYPLVVRPSYVLGGRAMEIVYDEADLRRYFQTAVSVSNDAPVLLDHFLDDAVEVDVDAIC 768

Query: 866  DSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMN 925
            D    V+IGGIMEHIEQAGVHSGDSAC +P  T+S    D +     KLA  L V GLMN
Sbjct: 769  DG-EMVLIGGIMEHIEQAGVHSGDSACSLPAYTLSQEIQDVMRQQVQKLAFELQVRGLMN 827

Query: 926  CQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPK 985
             Q+A+  + +VYL+E NPRA+RTVPFVSKA G PLAK AA VM+GKSL + G TKEVIP 
Sbjct: 828  VQFAVKNN-EVYLIEVNPRAARTVPFVSKATGVPLAKVAARVMAGKSLAEQGVTKEVIPP 886

Query: 986  HVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVF 1045
            + SVKE VLPF KF G D LLGPEMRSTGEVMG+  +F  AFAKAQ+ +   +   G   
Sbjct: 887  YYSVKEVVLPFNKFPGVDPLLGPEMRSTGEVMGVGRTFAEAFAKAQLGSNSTMKKHGRAL 946

Query: 1046 LSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVA 1105
            LS+ +  K  +  +A   L  GF++ +T GTA  L   GI    V K+HEGRPH  D + 
Sbjct: 947  LSVREGDKERVVDLAAKLLKQGFELDATHGTAIVLGEAGINPRLVNKVHEGRPHIQDRIK 1006

Query: 1106 NGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRS 1156
            NG+   ++ T+SG    + D   +RR  L YKV   TT++G  A A A+ +
Sbjct: 1007 NGEYTYIINTTSGRRAIE-DSRVIRRSALQYKVHYDTTLNGGFATAMALNA 1056


>gi|372275966|ref|ZP_09512002.1| carbamoyl phosphate synthase large subunit [Pantoea sp. SL1_M5]
 gi|390436794|ref|ZP_10225332.1| carbamoyl phosphate synthase large subunit [Pantoea agglomerans IG1]
          Length = 1075

 Score = 1226 bits (3171), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 616/1071 (57%), Positives = 785/1071 (73%), Gaps = 19/1071 (1%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTDL+ ILILGAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDLKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  E+V +++EKERPDA+LPTMGGQTALN A+ L   G LE++GV +IGA  DA
Sbjct: 63   ATYIEPIHWEVVRKIIEKERPDAVLPTMGGQTALNCALELERHGVLEEFGVTMIGATADA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  F  AMK+IG+ T  SGI +T++E +++A ++G FP IIRP+FT+GGTGGGI
Sbjct: 123  IDKAEDRRRFDVAMKSIGLDTARSGIAHTMEEALAVAEDVG-FPCIIRPSFTMGGTGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEFE IC+ GL  S T+++L+++SL+GWKEYE+EV+RD  DN +I+CSIEN D MG
Sbjct: 182  AYNREEFEEICERGLDLSPTNELLIDESLIGWKEYEMEVVRDKNDNCIIVCSIENFDAMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            +HTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGVE GGSNVQF+VNP DG ++VIEMN
Sbjct: 242  IHTGDSITVAPAQTLTDKEYQIMRNASLAVLREIGVETGGSNVQFSVNPKDGRLIVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKK-TPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT   TPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGYTLDELMNDITGGLTPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            F FEKF G+   LTTQMKSVGE MA+GRTFQES QKALR LE G +G+      +     
Sbjct: 362  FNFEKFAGANDRLTTQMKSVGEVMAIGRTFQESMQKALRGLEVGANGFDPKVHLDDPEAL 421

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
             +++  L+    DR+  I  A + GM VD +  L+ ID+WFL Q +EL+ +E+ +  + V
Sbjct: 422  TRIRRELKDAGSDRIWYIADAFRAGMSVDGVFNLTNIDRWFLVQIEELVRLEEQVAREGV 481

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
            +++ +     +KR+GF+D ++A      E E+R+ R    + P YKRVDTCAAEF  +T 
Sbjct: 482  NSLDETFLRALKRKGFADARLATLAGVAESEIRKLRQQFNLHPVYKRVDTCAAEFATDTA 541

Query: 627  YMYSSYDFECESAPT-QKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNS 685
            YMYS+Y+ ECE+ P+  ++K++ILGGGPNRIGQGIEFDYCC H + +L+  GY+TIM+N 
Sbjct: 542  YMYSTYEEECEANPSPDREKIMILGGGPNRIGQGIEFDYCCVHAALALREDGYQTIMVNC 601

Query: 686  NPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEH 745
            NPETVSTDYDTSDRLYFEP+T+EDVL ++ +E+P+G+IVQ+GGQTPLKL+          
Sbjct: 602  NPETVSTDYDTSDRLYFEPVTLEDVLEIVRIEQPKGVIVQYGGQTPLKLA---------- 651

Query: 746  RLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEI 805
            R   A+G   V + GTSPDSID AEDRERF   +  L+++QP      +   A+  A  +
Sbjct: 652  RALEAAG---VPVIGTSPDSIDRAEDRERFQQAVDRLNLKQPANATVATLEQAVEKAAGL 708

Query: 806  GYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALA 865
            GYP+VVRPSYVLGGRAMEIVY +  L  Y + AV V  + PVL+D++L DA+E+DVDA+ 
Sbjct: 709  GYPLVVRPSYVLGGRAMEIVYDEIDLKRYFQTAVSVSNDAPVLLDRFLDDAVEVDVDAIC 768

Query: 866  DSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMN 925
            D    V+IGGIMEHIEQAGVHSGDSAC +P  T+S    + +     KLA  LNV GLMN
Sbjct: 769  DG-ERVLIGGIMEHIEQAGVHSGDSACSLPAYTLSQEIQNVMRQQVEKLAFELNVRGLMN 827

Query: 926  CQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPK 985
             Q+A+  + +VYL+E NPRA+RTVPFVSKA G PLAK AA VM+GK+L + G T+EVIP 
Sbjct: 828  VQFAVKDN-EVYLIEVNPRAARTVPFVSKATGVPLAKVAARVMAGKTLAEQGVTEEVIPP 886

Query: 986  HVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVF 1045
            + SVKE VLPF KFQG D +LGPEMRSTGEVMG+  +F  AF+KA + A   +  SG   
Sbjct: 887  YYSVKEVVLPFNKFQGVDPILGPEMRSTGEVMGVGRTFAEAFSKAMLGAQSNMKKSGRAL 946

Query: 1046 LSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVA 1105
            LS+ +  K  +  +A      GF++ +T GTA  L   GI    V K+HEGRPH  D + 
Sbjct: 947  LSVREGDKKRIVDLAAKLQKFGFELDATHGTAVVLGEAGINPRLVNKVHEGRPHIQDRLK 1006

Query: 1106 NGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRS 1156
            NG+   +V T++G    + D   +RR  L YKV   TT++G  A A A+ +
Sbjct: 1007 NGEYSYIVNTTAGRQAIE-DSKLIRRSALQYKVHYDTTLNGGFATAMALNA 1056


>gi|388567380|ref|ZP_10153814.1| carbamoyl-phosphate synthase, large subunit [Hydrogenophaga sp. PBC]
 gi|388265402|gb|EIK90958.1| carbamoyl-phosphate synthase, large subunit [Hydrogenophaga sp. PBC]
          Length = 1093

 Score = 1226 bits (3171), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 634/1107 (57%), Positives = 808/1107 (72%), Gaps = 45/1107 (4%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ +LI+GAGPI+IGQACEFDYSG QACKAL+EEGY V+LINSNPATIMTDP  AD
Sbjct: 3    KRTDIQTVLIIGAGPIIIGQACEFDYSGVQACKALREEGYRVVLINSNPATIMTDPATAD 62

Query: 148  RTYITPMTPELVEQVLEKERPD-----ALLPTMGGQTALNLAVALAESGALEKYGVELIG 202
             TYI P+T + VE+++ KERP      A+LPTMGGQTALN A+ L   G L KYGVELIG
Sbjct: 63   VTYIEPITWQTVEKIIAKERPQTAGGFAILPTMGGQTALNCALDLWRHGVLAKYGVELIG 122

Query: 203  AKLDAIKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGG 262
            A  +AI KAEDR  FK AM  IG+ +  SGI +TLDE  ++   +G FP++IRP+FTLGG
Sbjct: 123  ATPEAIDKAEDRLKFKDAMTRIGLGSARSGIAHTLDEAWAVQKTVG-FPVVIRPSFTLGG 181

Query: 263  TGGGIAYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIEN 322
            TGGGIAYN EEFE ICK G+ AS T+++L+E+SLLGWKEYE+EV+RD ADN +I+CSIEN
Sbjct: 182  TGGGIAYNPEEFEIICKRGIEASPTNELLIEESLLGWKEYEMEVVRDKADNCIIVCSIEN 241

Query: 323  VDPMGVHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVM 382
            +DPMGVHTGDSITVAPAQTLTDKEYQ LR+ S+A++REIGV+ GGSNVQF++NP DG ++
Sbjct: 242  LDPMGVHTGDSITVAPAQTLTDKEYQILRNASLAVLREIGVDTGGSNVQFSINPKDGRMV 301

Query: 383  VIEMNPRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVV 441
            VIEMNPRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ N+IT   TPASFEPSIDYVV
Sbjct: 302  VIEMNPRVSRSSALASKATGFPIAKVAAKLAVGYTLDELRNEITGGATPASFEPSIDYVV 361

Query: 442  TKIPRFAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKE 501
            TKIPRFAFEKF  ++  LTTQMKSVGE MA+GRTFQESFQKALR LE G  G     + E
Sbjct: 362  TKIPRFAFEKFKDADDRLTTQMKSVGEVMAMGRTFQESFQKALRGLEVGVDG-----MNE 416

Query: 502  LDWDWEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFL 561
               D E L+  L  P P+R+  +  A   G  +DE+H+ + IDKWFL Q +E++ +E  +
Sbjct: 417  KTQDRETLEKELGEPGPERIWYVGDAFAAGWTLDEVHQFTKIDKWFLVQIEEIVKLELAM 476

Query: 562  --LTQ-----SVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRV 614
              LT      +++++      E+K++GFSD+++A   K+++  VR +R  LGV P YKRV
Sbjct: 477  DALTAEKGEGALASLDVVTLRELKKKGFSDRRLAKLLKTSDAAVRARRRELGVRPVYKRV 536

Query: 615  DTCAAEFEANTPYMYSSY----DFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTS 670
            DTCAAEF   T Y+YS+Y    D ECE+ PT  KK+++LGGGPNRIGQGIEFDYCC H +
Sbjct: 537  DTCAAEFATTTAYLYSTYEGHGDAECEAEPTTNKKIMVLGGGPNRIGQGIEFDYCCVHAA 596

Query: 671  FSLQSAGYETIMMNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQT 730
             +++  GYETIM+N NPETVSTDYDTSDRLYFEPLT+EDVL ++D E+P G+IVQ+GGQT
Sbjct: 597  LAMREDGYETIMVNCNPETVSTDYDTSDRLYFEPLTLEDVLEIVDKEKPAGVIVQYGGQT 656

Query: 731  PLKLSLPIHQYLDEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGG 790
            PLKL+L +           A+G   V I GT+PD IDAAEDRERF  ++ +L + QP   
Sbjct: 657  PLKLALGLE----------AAG---VPIIGTTPDMIDAAEDRERFQKLLHDLGLRQPPNA 703

Query: 791  IAKSEADALAIAKEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLID 850
             A++E +AL  A  +GYP+VVRPSYVLGGRAMEIV+    L  Y+  AV+V  + PVL+D
Sbjct: 704  TARTEPEALEKAAALGYPLVVRPSYVLGGRAMEIVHEQRDLERYMREAVKVSNDSPVLLD 763

Query: 851  KYLSDAIEIDVDALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSW 910
            ++L+DAIE DVDA+ D+ G V IGG+MEHIEQAGVHSGDSAC +P   +S + +D +   
Sbjct: 764  RFLNDAIECDVDAVRDATGRVFIGGVMEHIEQAGVHSGDSACSLPPYYLSKATVDELKRQ 823

Query: 911  TIKLAKRLNVCGLMNCQYAITTSGD-------VYLLEANPRASRTVPFVSKAIGHPLAKY 963
            T  +A+ LNV GLMN Q+AI    +       +Y+LE NPRASRTVPFVSKA G  LAK 
Sbjct: 824  TAAMAQGLNVVGLMNVQFAIQEVEEGGAKKDVIYVLEVNPRASRTVPFVSKATGIQLAKV 883

Query: 964  AALVMSGKSLNDLGFTKEVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSF 1023
            AA  M+G+SL+  G   EV+P + SVKEAV PF KF G D +LGPEM+STGEVMG+  +F
Sbjct: 884  AARCMAGQSLDQQGIGDEVVPPYFSVKEAVFPFVKFPGVDTILGPEMKSTGEVMGVGKTF 943

Query: 1024 PIAFAKAQIAAGQKLPLSGTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELK 1083
              AF K+QI AG KLP +G VFL++ +  KP    +A+  +D+GF++++T GTA  +E  
Sbjct: 944  GEAFVKSQIGAGTKLPTAGRVFLTVKNSDKPRAVEVARQLVDLGFELIATRGTAAAIEAA 1003

Query: 1084 GIAVERVLKMHEGRPHAGDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITT 1143
            G+AV+ V K+ EGRPH  DM+ NG I +++ T         D   +R   L  +V   TT
Sbjct: 1004 GLAVQTVNKVTEGRPHIVDMIKNGDIALVINTVEERRNAIADSRAIRTSALLARVTTFTT 1063

Query: 1144 VSGALANAEAIRSLKSNTVTMTALQDF 1170
            ++GA A  E ++ L S  + + ++QD 
Sbjct: 1064 IAGAEAAVEGMKFLSS--LDVISVQDM 1088


>gi|304396527|ref|ZP_07378408.1| carbamoyl-phosphate synthase, large subunit [Pantoea sp. aB]
 gi|440760778|ref|ZP_20939881.1| Carbamoyl-phosphate synthase large chain [Pantoea agglomerans 299R]
 gi|304356036|gb|EFM20402.1| carbamoyl-phosphate synthase, large subunit [Pantoea sp. aB]
 gi|436425531|gb|ELP23265.1| Carbamoyl-phosphate synthase large chain [Pantoea agglomerans 299R]
          Length = 1075

 Score = 1226 bits (3171), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 616/1071 (57%), Positives = 784/1071 (73%), Gaps = 19/1071 (1%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTDL+ ILILGAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDLKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  E+V +++EKERPDA+LPTMGGQTALN A+ L   G LE++GV +IGA  DA
Sbjct: 63   ATYIEPIHWEVVRKIIEKERPDAVLPTMGGQTALNCALELERHGVLEEFGVTMIGATADA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  F  AMK+IG+ T  SGI +T++E +++A ++G FP IIRP+FT+GGTGGGI
Sbjct: 123  IDKAEDRRRFDVAMKSIGLDTARSGIAHTMEEALAVAEDVG-FPCIIRPSFTMGGTGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEFE IC+ GL  S T+++L+++SL+GWKEYE+EV+RD  DN +I+CSIEN D MG
Sbjct: 182  AYNREEFEEICERGLDLSPTNELLIDESLIGWKEYEMEVVRDKNDNCIIVCSIENFDAMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            +HTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGVE GGSNVQF+VNP DG ++VIEMN
Sbjct: 242  IHTGDSITVAPAQTLTDKEYQIMRNASLAVLREIGVETGGSNVQFSVNPKDGRLIVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKK-TPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT   TPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGYTLDELMNDITGGLTPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            F FEKF G+   LTTQMKSVGE MA+GRTFQES QKALR LE G +G+      +     
Sbjct: 362  FNFEKFAGANDRLTTQMKSVGEVMAIGRTFQESMQKALRGLEVGANGFDPKVHLDDPEAL 421

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
             +++  L+    DR+  I  A + GM VD +  L+ ID+WFL Q +EL+ +E  +  + V
Sbjct: 422  TRIRRELKDAGSDRIWYIADAFRAGMSVDGVFNLTNIDRWFLVQIEELVKLEDQVAREGV 481

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
            +++  +    +KR+GF+D ++A      E E+R+ R    + P YKRVDTCAAEF  +T 
Sbjct: 482  NSLDANFLRTLKRKGFADARLATLAGVAESEIRKLRQQFNLHPVYKRVDTCAAEFATDTA 541

Query: 627  YMYSSYDFECESAPT-QKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNS 685
            YMYS+Y+ ECE+ P+  ++K++ILGGGPNRIGQGIEFDYCC H + +L+  GY+TIM+N 
Sbjct: 542  YMYSTYEEECEANPSPDREKIMILGGGPNRIGQGIEFDYCCVHAALALREDGYQTIMVNC 601

Query: 686  NPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEH 745
            NPETVSTDYDTSDRLYFEP+T+EDVL ++ +E+P+G+IVQ+GGQTPLKL+          
Sbjct: 602  NPETVSTDYDTSDRLYFEPVTLEDVLEIVRIEQPKGVIVQYGGQTPLKLA---------- 651

Query: 746  RLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEI 805
            R   A+G   V + GTSPDSID AEDRERF   +  L+++QP      +   A+  A  +
Sbjct: 652  RALEAAG---VPVIGTSPDSIDRAEDRERFQQAVDRLNLKQPANATVATLEQAVEKAAGL 708

Query: 806  GYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALA 865
            GYP+VVRPSYVLGGRAMEIVY +  L  Y + AV V  + PVL+D++L DA+E+DVDA+ 
Sbjct: 709  GYPLVVRPSYVLGGRAMEIVYDEIDLKRYFQTAVSVSNDAPVLLDRFLDDAVEVDVDAIC 768

Query: 866  DSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMN 925
            D    V+IGGIMEHIEQAGVHSGDSAC +P  T+S    + +     KLA  LNV GLMN
Sbjct: 769  DG-ERVLIGGIMEHIEQAGVHSGDSACSLPAYTLSQEIQNVMRQQVEKLAFELNVRGLMN 827

Query: 926  CQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPK 985
             Q+A+  + +VYL+E NPRA+RTVPFVSKA G PLAK AA VM+GK+L + G T+EVIP 
Sbjct: 828  VQFAVKDN-EVYLIEVNPRAARTVPFVSKATGVPLAKVAARVMAGKTLAEQGVTEEVIPP 886

Query: 986  HVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVF 1045
            + SVKE VLPF KFQG D +LGPEMRSTGEVMG+  +F  AF+KA + A   +  SG   
Sbjct: 887  YYSVKEVVLPFNKFQGVDPILGPEMRSTGEVMGVGRTFAEAFSKAMLGAQSNMKKSGRAL 946

Query: 1046 LSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVA 1105
            LS+ +  K  +  +A      GF++ +T GTA  L   GI    V K+HEGRPH  D + 
Sbjct: 947  LSVREGDKKRIVDLAAKLQKFGFELDATHGTAVVLGEAGINPRLVNKVHEGRPHIQDRLK 1006

Query: 1106 NGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRS 1156
            NG+   +V T++G    + D   +RR  L YKV   TT++G  A A A+ +
Sbjct: 1007 NGEYSYIVNTTAGRQAIE-DSKLIRRSALQYKVHYDTTLNGGFATAMALNA 1056


>gi|239815598|ref|YP_002944508.1| carbamoyl-phosphate synthase, large subunit [Variovorax paradoxus
            S110]
 gi|239802175|gb|ACS19242.1| carbamoyl-phosphate synthase, large subunit [Variovorax paradoxus
            S110]
          Length = 1082

 Score = 1226 bits (3171), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 629/1078 (58%), Positives = 795/1078 (73%), Gaps = 30/1078 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KR+DL+ ILI+GAGPI+IGQACEFDYSG QACKAL+EEGY+VILINSNPATIMTDP  AD
Sbjct: 3    KRSDLQSILIIGAGPIIIGQACEFDYSGVQACKALREEGYKVILINSNPATIMTDPATAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYG-------VEL 200
             TYI P+T + VE+++ KERPDA+LPTMGGQTALN A+ L   G L+KY        VEL
Sbjct: 63   VTYIEPITWQTVEKIIAKERPDAILPTMGGQTALNCALDLWRHGVLDKYTGAATNKPVEL 122

Query: 201  IGAKLDAIKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTL 260
            IGA  +AI KAEDR  FK AM  IG+ +  SGI +++DE  ++   +G FP +IRP+FTL
Sbjct: 123  IGATPEAIDKAEDRLKFKDAMTKIGLGSARSGIAHSMDEAWAVQKSVG-FPTVIRPSFTL 181

Query: 261  GGTGGGIAYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSI 320
            GGTGGGIAYN EEFE ICK G+ AS T+++L+E+SLLGWKEYE+EV+RD ADN +I+CSI
Sbjct: 182  GGTGGGIAYNPEEFETICKRGIEASPTNELLIEESLLGWKEYEMEVVRDKADNCIIVCSI 241

Query: 321  ENVDPMGVHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGE 380
            EN+DPMGVHTGDSITVAPAQTL+DKEYQ LR+ S+A++REIGV+ GGSNVQF++NP DG 
Sbjct: 242  ENLDPMGVHTGDSITVAPAQTLSDKEYQILRNASLAVLREIGVDTGGSNVQFSINPKDGR 301

Query: 381  VMVIEMNPRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITK-KTPASFEPSIDY 439
            ++VIEMNPRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ N+IT   TPASFEPSIDY
Sbjct: 302  MVVIEMNPRVSRSSALASKATGFPIAKVAAKLAVGYTLDELRNEITGGATPASFEPSIDY 361

Query: 440  VVTKIPRFAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNV 499
            VVTKIPRFAFEKFP ++  LTTQMKSVGE MA+GRTFQESFQKALR LE G  G     +
Sbjct: 362  VVTKIPRFAFEKFPQADSRLTTQMKSVGEVMAMGRTFQESFQKALRGLEVGVDG-----L 416

Query: 500  KELDWDWEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQ 559
             E   D E L+  L  P P+R+  +  A   G+ VDE+  L+ ID WFL Q +E++ +E 
Sbjct: 417  NEKTQDREVLEKELGEPGPERIWYVGDAFAMGLSVDEVFALTKIDPWFLVQIEEIVKIEL 476

Query: 560  FLLTQSVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAA 619
             L T+S++++ +D    +K++GFSD+++A   K+T+  VREKR +LGV P YKRVDTCAA
Sbjct: 477  ELETKSLADIDRDTLLALKKKGFSDRRLAKQLKTTDTAVREKRRALGVRPVYKRVDTCAA 536

Query: 620  EFEANTPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYE 679
            EF  NT YMYS+Y+ ECE+ PT KKK+++LGGGPNRIGQGIEFDYCC H + +++  GYE
Sbjct: 537  EFATNTAYMYSTYEDECEADPTDKKKIMVLGGGPNRIGQGIEFDYCCVHAALAMREDGYE 596

Query: 680  TIMMNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIH 739
            TIM+N NPETVSTDYDTSDRLYFEPLT+EDVL ++D E+P G+IVQ+GGQTPLKL+L + 
Sbjct: 597  TIMVNCNPETVSTDYDTSDRLYFEPLTLEDVLEIVDKEKPLGVIVQYGGQTPLKLALDLE 656

Query: 740  QYLDEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADAL 799
                      A+G   V I GTSPD IDAAEDRERF  ++ EL + QP    A++E +AL
Sbjct: 657  ----------ANG---VPIIGTSPDMIDAAEDRERFQKLLHELGLRQPPNATARTEPEAL 703

Query: 800  AIAKEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEI 859
              A  +GYP+VVRPSYVLGGRAMEIV+    L  Y+  AV+V  + PVL+D++L+DA+E 
Sbjct: 704  EKAAALGYPLVVRPSYVLGGRAMEIVHEQRDLERYMREAVKVSNDSPVLLDRFLNDAVEC 763

Query: 860  DVDALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLN 919
            DVD + D+ G  +IGG+MEHIEQAGVHSGDSAC +P  ++S+  +  +   +  +A  LN
Sbjct: 764  DVDCIRDAEGQTLIGGVMEHIEQAGVHSGDSACSLPPYSLSAETIAELKRQSAAMAAALN 823

Query: 920  VCGLMNCQYAITTSGD---VYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDL 976
            V GLMN Q+AI        +Y+LE NPRASRTVP+VSKA G  LAK AA  M+G+SL   
Sbjct: 824  VVGLMNVQFAIQQKDGKDVIYVLEVNPRASRTVPYVSKATGIQLAKVAARCMAGQSLKSQ 883

Query: 977  GFTKEVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQ 1036
            G TKEV P + SVKEAV PF KF G D +LGPEM+STGEVMG+  +F  AF K+Q+ AG 
Sbjct: 884  GVTKEVTPPYFSVKEAVFPFVKFPGVDTILGPEMKSTGEVMGVGRTFGEAFVKSQLGAGT 943

Query: 1037 KLPLSGTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEG 1096
             LP SG VF+S+ +  K     +A+  + +GF+I++T GTA  +   GI    V K+ EG
Sbjct: 944  LLPKSGKVFISVKNNDKARAVEVARGLVKLGFEIIATKGTAAAIGAAGIECATVNKVTEG 1003

Query: 1097 RPHAGDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAI 1154
            RPH  DM+ N +I +++ T         D  ++R   L  +V   TT+ GA A  E +
Sbjct: 1004 RPHIVDMIKNNEIALVINTVEERRNAINDSRQIRTSALLARVTTFTTIFGAEAAVEGM 1061


>gi|87308406|ref|ZP_01090547.1| carbamoyl-phosphate synthase (glutamine-hydrolyzing) large chain
            [Blastopirellula marina DSM 3645]
 gi|87288963|gb|EAQ80856.1| carbamoyl-phosphate synthase (glutamine-hydrolyzing) large chain
            [Blastopirellula marina DSM 3645]
          Length = 1088

 Score = 1226 bits (3171), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 618/1098 (56%), Positives = 819/1098 (74%), Gaps = 32/1098 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            +R D++KIL++G+GPI+IGQACEFDYSGTQACKAL+EEGYEV+L+NSNPATIMTDP +AD
Sbjct: 3    RRDDIKKILLIGSGPIIIGQACEFDYSGTQACKALREEGYEVVLVNSNPATIMTDPDMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
            RTYI P++ E++E+++ KERPDALLPT+GGQTALNLA+ L + G LEKYGVE+IGA    
Sbjct: 63   RTYIEPLSWEIIEKIIAKERPDALLPTLGGQTALNLAMELEKHGVLEKYGVEMIGANAAV 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAE+R+ FK AM+ IG++    G  +T+ E  ++ +EIG  P ++RP+FT+GG+G  I
Sbjct: 123  IAKAEEREQFKAAMEKIGLEVCRGGTVHTIQEARAVLDEIG-LPAVVRPSFTMGGSGSAI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEF+++ + GL  S  ++VL+E+S++GWKEYE+EVMRD+ADNVVIIC+IEN DP+G
Sbjct: 182  AYNREEFDSLVRNGLDQSPVNEVLIEESVIGWKEYEMEVMRDVADNVVIICTIENFDPVG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTL+DKEYQR+RD S+A+IREIGVE GGSN+QFA +P    ++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLSDKEYQRMRDASLAVIREIGVETGGSNIQFANDPHSDRMIVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRF 447
            PRVSRSSALASKATGFPIAK+AAKL+VGY L ++PNDIT++T A FEP+IDYVVTKIPRF
Sbjct: 302  PRVSRSSALASKATGFPIAKIAAKLAVGYLLHELPNDITRETLACFEPTIDYVVTKIPRF 361

Query: 448  AFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDWE 507
            AFEKFP ++  LTTQMKSVGE MA+GRTF+ESFQKALR LE G  G+G S+ K+L W  E
Sbjct: 362  AFEKFPEADATLTTQMKSVGETMAIGRTFKESFQKALRGLEVGRFGFG-SDGKDL-WGTE 419

Query: 508  ------QLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFL 561
                  +++  L  PN DR   +  A+K GM +++I++L+FID WF+ Q ++L++ E+ L
Sbjct: 420  EQPSDDEIRAKLSTPNADRPWYLRYAIKSGMTLEKIYQLTFIDPWFIDQLQQLVEKEEEL 479

Query: 562  LT-QSVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAE 620
                S+S +T     E K+ G+SD+Q+A    S+E EVR++R  LGVI ++K VDTCAAE
Sbjct: 480  AAIGSLSAITAAQMKEAKQFGYSDRQLATLLGSSELEVRKQRKKLGVITTFKSVDTCAAE 539

Query: 621  FEANTPYMYSSYDFECESAPTQ--KKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGY 678
            FEA TPY YS+Y+ E E+      KK+V+ILGGGPNRIGQGIEFDYCCCH SF+L+  G 
Sbjct: 540  FEAYTPYFYSTYEDEDETPAKNPDKKRVMILGGGPNRIGQGIEFDYCCCHASFALRELGI 599

Query: 679  ETIMMNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPI 738
            E+IM+NSNPETVSTDYDTSD L+FEPLT EDVLN+ D  +P+G+IVQFGGQTPL L+   
Sbjct: 600  ESIMVNSNPETVSTDYDTSDILFFEPLTTEDVLNICDKVQPDGVIVQFGGQTPLNLA--- 656

Query: 739  HQYLDEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADA 798
                   R  + +G   V I GTS D+I+AAEDRE+F  ++ +L ++QP   IA++   A
Sbjct: 657  -------RALATAG---VPIIGTSVDTIEAAEDREKFQKLLNQLGLKQPANAIARTMTQA 706

Query: 799  LAIAKEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIE 858
               + ++GYP +VRPS+VLGGRAMEI Y D+    Y+  A  V   +PVLID++L DA E
Sbjct: 707  RTESAKVGYPSLVRPSFVLGGRAMEICYDDKQFERYVAEAFLVAQGQPVLIDRFLEDATE 766

Query: 859  IDVDALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRL 918
            +DVD ++D   NVV+ GIMEHIE+AGVHSGDSAC IP  ++    ++ I   T+ +A++L
Sbjct: 767  VDVDCISDG-ENVVVAGIMEHIEEAGVHSGDSACSIPPYSLPGPVVNEIREATVAMARKL 825

Query: 919  NVCGLMNCQYAITTSG---DVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLND 975
             V GLMN Q+A+       +VY+LE NPRASRTVPFV+KA G  +AK AA VM+G +L +
Sbjct: 826  KVIGLMNVQFAVKQEDGKMNVYVLEVNPRASRTVPFVAKATGMQVAKIAAKVMTGMTLPE 885

Query: 976  LGFTKEVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAG 1035
            LG TKE IP HVS+KE+V PF KF G D++LGPEMRSTGEVMGI   F IAFAK+Q+AAG
Sbjct: 886  LGVTKEPIPAHVSIKESVFPFRKFSGVDIVLGPEMRSTGEVMGISERFSIAFAKSQLAAG 945

Query: 1036 QKLPL--SGTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKM 1093
              LP    G +FLS++   K H+  IAK    +GF++V T GTA  L  +G+ VE++ K+
Sbjct: 946  ILLPQPEDGKIFLSVSPRHKEHIVEIAKRLDSLGFQLVCTEGTAKRLREEGLKVEQIKKL 1005

Query: 1094 HEGRPHAGDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEA 1153
             EG P+  D++ +G + +++ T SG      +G ++R   + + VP ITT+  A A A+A
Sbjct: 1006 AEGHPNLLDLLIDGAVSLVMNTPSGKGARTDEG-RIRAAAVQHGVPCITTIQAAEAAAKA 1064

Query: 1154 IRSLKSNTVTMTALQDFF 1171
            + +L++  + + +LQD F
Sbjct: 1065 MEALRNGEMNVLSLQDRF 1082



 Score =  243 bits (619), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 145/404 (35%), Positives = 230/404 (56%), Gaps = 19/404 (4%)

Query: 82  KDQKLGKRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMT 141
           +D+   K  D ++++ILG GP  IGQ  EFDY    A  AL+E G E I++NSNP T+ T
Sbjct: 554 EDETPAKNPDKKRVMILGGGPNRIGQGIEFDYCCCHASFALRELGIESIMVNSNPETVST 613

Query: 142 DPGLADRTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELI 201
           D   +D  +  P+T E V  + +K +PD ++   GGQT LNLA ALA +      GV +I
Sbjct: 614 DYDTSDILFFEPLTTEDVLNICDKVQPDGVIVQFGGQTPLNLARALATA------GVPII 667

Query: 202 GAKLDAIKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLG 261
           G  +D I+ AEDR+ F++ +  +G+K P + I  T+ +  + + ++G +P ++RP+F LG
Sbjct: 668 GTSVDTIEAAEDREKFQKLLNQLGLKQPANAIARTMTQARTESAKVG-YPSLVRPSFVLG 726

Query: 262 GTGGGIAYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIE 321
           G    I Y+ ++FE         +    VL+++ L    E +++ + D  +NVV+   +E
Sbjct: 727 GRAMEICYDDKQFERYVAEAFLVAQGQPVLIDRFLEDATEVDVDCISD-GENVVVAGIME 785

Query: 322 NVDPMGVHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGE- 380
           +++  GVH+GDS    P  +L       +R+ ++A+ R++ V  G  NVQFAV   DG+ 
Sbjct: 786 HIEEAGVHSGDSACSIPPYSLPGPVVNEIREATVAMARKLKV-IGLMNVQFAVKQEDGKM 844

Query: 381 -VMVIEMNPRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDY 439
            V V+E+NPR SR+    +KATG  +AK+AAK+  G +L ++   +TK      EP   +
Sbjct: 845 NVYVLEVNPRASRTVPFVAKATGMQVAKIAAKVMTGMTLPEL--GVTK------EPIPAH 896

Query: 440 VVTKIPRFAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKA 483
           V  K   F F KF G + +L  +M+S GE M +   F  +F K+
Sbjct: 897 VSIKESVFPFRKFSGVDIVLGPEMRSTGEVMGISERFSIAFAKS 940


>gi|420334294|ref|ZP_14835917.1| carbamoyl-phosphate synthase large chain [Shigella flexneri K-315]
 gi|391268471|gb|EIQ27396.1| carbamoyl-phosphate synthase large chain [Shigella flexneri K-315]
          Length = 1073

 Score = 1226 bits (3171), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 618/1071 (57%), Positives = 782/1071 (73%), Gaps = 19/1071 (1%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILILGAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  E+V +++EKERPDA+LPTMGGQTALN A+ L   G LE++GV +IGA  DA
Sbjct: 63   ATYIEPIHWEVVRKIIEKERPDAVLPTMGGQTALNCALELERQGVLEEFGVTMIGATADA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  F  AMK IG++T  SGI +T++E +++A ++G FP IIRP+FT+GG+GGGI
Sbjct: 123  IDKAEDRRRFDVAMKKIGLETARSGIAHTMEEALAVAADVG-FPCIIRPSFTMGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEFE IC  GL  S T ++L+++SL+GWKEYE+EV+RD  DN +I+CSIEN D MG
Sbjct: 182  AYNREEFEEICARGLDLSPTKELLIDESLIGWKEYEMEVVRDKNDNCIIVCSIENFDAMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            +HTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGVE GGSNVQFAVNP +G ++VIEMN
Sbjct: 242  IHTGDSITVAPAQTLTDKEYQIMRNASMAVLREIGVETGGSNVQFAVNPKNGRLIVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT  +TPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGYTLDELMNDITGGRTPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            F FEKF G+   LTTQMKSVGE MA+GRT QES QKALR LE G +G+      +     
Sbjct: 362  FNFEKFAGANDRLTTQMKSVGEVMAIGRTQQESLQKALRGLEVGATGFDPKVSLDDPEAL 421

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
             +++  L+    +R+  I  A + G+ VD +  L+ ID+WFL Q +EL+ +E+ +    +
Sbjct: 422  TKIRRELKDAGAERIWYIADAFRAGLSVDGVFNLTNIDRWFLVQIEELVRLEEKVAEVGI 481

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
            + +  +   ++KR+GF+D ++A      E E+R+ R    + P YKRVDTCAAEF  +T 
Sbjct: 482  TGLNAEFLRQLKRKGFADARLAKLAGVREAEIRKLRDQYDLHPVYKRVDTCAAEFATDTA 541

Query: 627  YMYSSYDFECESAP-TQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNS 685
            YMYS+Y+ ECE+ P T ++K+++LGGGPNRIGQGIEFDYCC H S +L+  GYETIM+N 
Sbjct: 542  YMYSTYEEECEANPSTDREKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVNC 601

Query: 686  NPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEH 745
            NPETVSTDYDTSDRLYFEP+T+EDVL ++ +E+P+G+IVQ+GGQTPLKL+          
Sbjct: 602  NPETVSTDYDTSDRLYFEPVTLEDVLEIVRIEKPKGVIVQYGGQTPLKLA---------- 651

Query: 746  RLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEI 805
            R   A+G   V + GTSPDSID AEDRERF   ++ L ++QP      +   A+  AKEI
Sbjct: 652  RALEAAG---VPVIGTSPDSIDRAEDRERFQHAVERLKLKQPANATVTAIEMAVEKAKEI 708

Query: 806  GYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALA 865
            GYP+VVRPSYVLGGRAMEIVY +  L  Y + AV V  + PVL+D +L DA+E+DVDA+ 
Sbjct: 709  GYPLVVRPSYVLGGRAMEIVYDEADLRRYFQTAVSVSNDAPVLLDHFLDDAVEVDVDAIC 768

Query: 866  DSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMN 925
            D    V+IGGIMEHIEQAGVHSGDSAC +P  T+S    D +     KLA  L V GLMN
Sbjct: 769  DG-EMVLIGGIMEHIEQAGVHSGDSACSLPAYTLSQEIQDVMRQQVQKLAFELQVRGLMN 827

Query: 926  CQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPK 985
             Q+A+  + +VYL+E NPRA+RTVPFVSKA G PLAK AA VM+GKSL + G TKEVIP 
Sbjct: 828  VQFAVKNN-EVYLIEVNPRAARTVPFVSKATGVPLAKVAARVMAGKSLAEQGVTKEVIPP 886

Query: 986  HVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVF 1045
            + SVKE VLPF KF G D LLGPEMRSTGEVMG+  +F  AFAKAQ+ +   +   G   
Sbjct: 887  YYSVKEVVLPFNKFPGVDPLLGPEMRSTGEVMGVGRTFAEAFAKAQLGSNSTMKKHGRAL 946

Query: 1046 LSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVA 1105
            LS+ +  K  +  +A   L  GF++ +T GTA  L   GI    V K+HEGRPH  D + 
Sbjct: 947  LSVREGDKERVVDLAAKLLKQGFELDATHGTAIVLGEAGINPRLVNKVHEGRPHIQDRIK 1006

Query: 1106 NGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRS 1156
            NG+   ++ T+SG    + D   +RR  L YKV   TT++G  A A A+ +
Sbjct: 1007 NGEYTYIINTTSGRRAIE-DSRVIRRSALQYKVHYDTTLNGGFATAMALNA 1056


>gi|168230330|ref|ZP_02655388.1| carbamoyl-phosphate synthase, large subunit [Salmonella enterica
            subsp. enterica serovar Kentucky str. CDC 191]
 gi|194472177|ref|ZP_03078161.1| carbamoyl-phosphate synthase, large subunit [Salmonella enterica
            subsp. enterica serovar Kentucky str. CVM29188]
 gi|194458541|gb|EDX47380.1| carbamoyl-phosphate synthase, large subunit [Salmonella enterica
            subsp. enterica serovar Kentucky str. CVM29188]
 gi|205334983|gb|EDZ21747.1| carbamoyl-phosphate synthase, large subunit [Salmonella enterica
            subsp. enterica serovar Kentucky str. CDC 191]
          Length = 1075

 Score = 1226 bits (3171), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 616/1078 (57%), Positives = 784/1078 (72%), Gaps = 19/1078 (1%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILILGAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  E+V +++EKERPDA+LPTMGGQTALN A+ L   G LE++GV +IGA  DA
Sbjct: 63   ATYIEPIHWEVVRKIIEKERPDAVLPTMGGQTALNCALELERQGVLEEFGVTMIGATADA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  F  AMK IG+ T  SGI +T++E +++A ++G FP IIRP+FT+GGTGGGI
Sbjct: 123  IDKAEDRRRFDIAMKKIGLDTARSGIAHTMEEALAVAADVG-FPCIIRPSFTMGGTGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEFE IC+ GL  S T+++L+++SL+GWKEYE+EV+RD  DN +I+CSIEN D MG
Sbjct: 182  AYNREEFEEICERGLDLSPTNELLIDESLIGWKEYEMEVVRDKNDNCIIVCSIENFDAMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            +HTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGVE GGSNVQFAVNP +G ++VIEMN
Sbjct: 242  IHTGDSITVAPAQTLTDKEYQIMRNASMAVLREIGVETGGSNVQFAVNPKNGRLIVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT  +TPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGYTLDELMNDITGGRTPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            F FEKF G+   LTTQMKSVGE MA+GRT QES QKALR LE G +G+      +     
Sbjct: 362  FNFEKFAGANDRLTTQMKSVGEVMAIGRTQQESLQKALRGLEVGATGFDPKVSLDDPEAL 421

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
             +++  L+    DR+  I  A + G+ VD +  L+ ID+WFL Q +EL+ +E+ +    +
Sbjct: 422  TKIRRELKDAGADRIWYIADAFRAGLSVDGVFNLTNIDRWFLVQIEELVRLEEKVAEVGI 481

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
            + +  D   ++KR+GF+D ++A      E E+R+ R    + P YKRVDTCAAEF  +T 
Sbjct: 482  TGLNADFLRQLKRKGFADARLAKLAGVREAEIRKLRDQYDLHPVYKRVDTCAAEFATDTA 541

Query: 627  YMYSSYDFECESAPT-QKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNS 685
            YMYS+Y+ ECE+ P+  + K+++LGGGPNRIGQGIEFDYCC H S +L+  GYETIM+N 
Sbjct: 542  YMYSTYEDECEANPSVDRDKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVNC 601

Query: 686  NPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEH 745
            NPETVSTDYDTSDRLYFEP+T+EDVL ++ +E+P+G+IVQ+GGQTPLKL+          
Sbjct: 602  NPETVSTDYDTSDRLYFEPVTLEDVLEIVRIEKPKGVIVQYGGQTPLKLA---------- 651

Query: 746  RLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEI 805
            R   A+G   V + GTSPD+ID AEDRERF   +  L ++QP      +   A+  AKEI
Sbjct: 652  RALEAAG---VPVIGTSPDAIDRAEDRERFQHAVDRLKLKQPANATVTAIEQAVEKAKEI 708

Query: 806  GYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALA 865
            GYP+VVRPSYVLGGRAMEIVY +  L  Y + AV V  + PVL+D++L DA+E+DVDA+ 
Sbjct: 709  GYPLVVRPSYVLGGRAMEIVYDEADLRRYFQTAVSVSNDAPVLLDRFLDDAVEVDVDAIC 768

Query: 866  DSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMN 925
            D    V+IGGIMEHIEQAGVHSGDSAC +P  T+S    D +     KLA  L V GLMN
Sbjct: 769  DG-EMVLIGGIMEHIEQAGVHSGDSACSLPAYTLSQEIQDVMRQQVQKLAFELQVRGLMN 827

Query: 926  CQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPK 985
             Q+A+  + +VYL+E NPRA+RTVPFVSKA G PLAK AA VM+GK+L + G T+E+IP 
Sbjct: 828  VQFAVKDN-EVYLIEVNPRAARTVPFVSKATGVPLAKVAARVMAGKTLTEQGVTQEIIPP 886

Query: 986  HVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVF 1045
            + SVKE VLPF KF G D LLGPEMRSTGEVMG+  +F  AFAKAQ+ +   +   G   
Sbjct: 887  YYSVKEVVLPFNKFPGVDPLLGPEMRSTGEVMGVGRTFAEAFAKAQLGSNSTMKKQGRAL 946

Query: 1046 LSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVA 1105
            LS+ +  K  +  +A   L  GF++ +T GTA  L   GI    V K+HEGRPH  D + 
Sbjct: 947  LSVREGDKERVVDLAAKLLKQGFELDATHGTAIVLGEAGINPRLVNKVHEGRPHIQDRIK 1006

Query: 1106 NGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTVT 1163
            NG+   ++ T++G    + D   +RR  L YKV   TT++G  A   A+ +  +  VT
Sbjct: 1007 NGEYTYIINTTAGRRAIE-DSRVIRRSALQYKVHYDTTLNGGFATTMALNADATEKVT 1063


>gi|432752864|ref|ZP_19987435.1| carbamoyl-phosphate synthase large chain [Escherichia coli KTE29]
 gi|431291522|gb|ELF82025.1| carbamoyl-phosphate synthase large chain [Escherichia coli KTE29]
          Length = 1073

 Score = 1226 bits (3171), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 618/1071 (57%), Positives = 781/1071 (72%), Gaps = 19/1071 (1%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILILGAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  E+V +++EKERPDA+LPTMGGQTALN A+ L   G LE++GV +IGA  DA
Sbjct: 63   ATYIEPIHWEVVRKIIEKERPDAVLPTMGGQTALNCALELERQGVLEEFGVTMIGATADA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  F  AMK IG++T  SGI +T++E +++A ++G FP IIRP+FT+GG+GGGI
Sbjct: 123  IDKAEDRRRFDVAMKKIGLETARSGIAHTMEEALAVAADVG-FPCIIRPSFTMGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEFE IC  GL  S T ++L+++SL+GWKEYE+EV+RD  DN +I+CSIEN D MG
Sbjct: 182  AYNREEFEEICARGLDLSPTKELLIDESLIGWKEYEMEVVRDKNDNCIIVCSIENFDAMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            +HTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGVE GGSNVQFAVNP +G ++VIEMN
Sbjct: 242  IHTGDSITVAPAQTLTDKEYQIMRNASMAVLREIGVETGGSNVQFAVNPKNGRLIVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT  +TPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGYTLDELMNDITGGRTPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            F FEKF G+   LTTQMKSVGE MA+GRT QES QKALR LE G +G+      +     
Sbjct: 362  FNFEKFAGANDRLTTQMKSVGEVMAIGRTQQESLQKALRGLEVGATGFDPKVSLDDPEAL 421

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
             +++  L+    +R+  I  A + G+ VD +  L+ ID+WFL Q +EL+ +E+ +    +
Sbjct: 422  TKIRRELKDAGAERIWYIADAFRAGLSVDGVFNLTNIDRWFLVQIEELVRLEEKVAEVGI 481

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
            + +  D   ++KR+GF+D ++A      E E+R+ R    + P YKRVDTCAAEF  +T 
Sbjct: 482  TGLNADFLRQLKRKGFADARLAKLAGVREAEIRKLRDQYDLHPVYKRVDTCAAEFATDTA 541

Query: 627  YMYSSYDFECESAP-TQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNS 685
            YMYS+Y+ ECE+ P T ++K+++LGGGPNRIGQGIEFDYCC H S +L+  GYETIM+N 
Sbjct: 542  YMYSTYEEECEANPSTDREKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVNC 601

Query: 686  NPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEH 745
            NPETVSTDYDTSDRLYFEP+T+EDVL ++ +E+P+G+IVQ+GGQTPLKL+          
Sbjct: 602  NPETVSTDYDTSDRLYFEPVTLEDVLEIVRIEKPKGVIVQYGGQTPLKLA---------- 651

Query: 746  RLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEI 805
            R   A+G   V + GTSPD+ID AEDRERF   +  L ++QP      +   A+  AKEI
Sbjct: 652  RALEAAG---VPVIGTSPDAIDRAEDRERFQHAVDRLKLKQPANATVTAIEMAVEKAKEI 708

Query: 806  GYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALA 865
            GYP+VVRPSYVLGGRAMEIVY +  L  Y + AV V  + PVL+D +L DA+E+DVDA+ 
Sbjct: 709  GYPLVVRPSYVLGGRAMEIVYDEADLRRYFQTAVSVSNDAPVLLDHFLDDAVEVDVDAIC 768

Query: 866  DSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMN 925
            D    V+IGGIMEHIEQAGVHSGDSAC +P  T+S    D +     KLA  L V GLMN
Sbjct: 769  DG-EMVLIGGIMEHIEQAGVHSGDSACSLPAYTLSQEIQDVMRQQVQKLAFELQVRGLMN 827

Query: 926  CQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPK 985
             Q+A+  + +VYL+E NPRA+RTVPFVSKA G PLAK AA VM+GKSL + G TKEVIP 
Sbjct: 828  VQFAVKNN-EVYLIEVNPRAARTVPFVSKATGVPLAKVAARVMAGKSLAEQGVTKEVIPP 886

Query: 986  HVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVF 1045
            + SVKE VLPF KF G D LLGPEMRSTGEVMG+  +F  AFAKAQ+ +   +   G   
Sbjct: 887  YYSVKEVVLPFNKFPGVDPLLGPEMRSTGEVMGVGRTFAEAFAKAQLGSNSTMKKHGRAL 946

Query: 1046 LSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVA 1105
            LS+ +  K  +  +A   L  GF++ +T GTA  L   GI    V K+HEGRPH  D + 
Sbjct: 947  LSVREGDKERVVDLAAKLLKQGFELDATHGTAIVLGEAGINPRLVNKVHEGRPHIQDRIK 1006

Query: 1106 NGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRS 1156
            NG+   ++ T+SG    + D   +RR  L YKV   TT++G  A A A+ +
Sbjct: 1007 NGEYTYIINTTSGRRAIE-DSRVIRRSALQYKVHYDTTLNGGFATAMALNA 1056


>gi|170021609|ref|YP_001726563.1| carbamoyl phosphate synthase large subunit [Escherichia coli ATCC
            8739]
 gi|301648401|ref|ZP_07248137.1| carbamoyl-phosphate synthase, large subunit [Escherichia coli MS
            146-1]
 gi|331640482|ref|ZP_08341630.1| carbamoyl-phosphate synthase, large subunit [Escherichia coli H736]
 gi|386612195|ref|YP_006131861.1| carbamoyl-phosphate synthase, large subunit CarB [Escherichia coli
            UMNK88]
 gi|387610510|ref|YP_006113626.1| carbamoyl-phosphate synthase large subunit [Escherichia coli ETEC
            H10407]
 gi|415777639|ref|ZP_11488838.1| carbamoyl-phosphate synthase large chain [Escherichia coli 3431]
 gi|417263646|ref|ZP_12051055.1| carbamoyl-phosphate synthase, large subunit [Escherichia coli 2.3916]
 gi|417277860|ref|ZP_12065180.1| carbamoyl-phosphate synthase, large subunit [Escherichia coli 3.2303]
 gi|417632504|ref|ZP_12282728.1| carbamoyl-phosphate synthase large chain [Escherichia coli
            STEC_S1191]
 gi|418300920|ref|ZP_12912714.1| carbamoyl-phosphate synthase large chain [Escherichia coli UMNF18]
 gi|419140393|ref|ZP_13685153.1| carbamoyl-phosphate synthase large chain [Escherichia coli DEC6A]
 gi|419146039|ref|ZP_13690737.1| carB [Escherichia coli DEC6B]
 gi|419157033|ref|ZP_13701577.1| carbamoyl-phosphate synthase large chain [Escherichia coli DEC6C]
 gi|419157281|ref|ZP_13701813.1| carbamoyl-phosphate synthase large chain [Escherichia coli DEC6D]
 gi|419167445|ref|ZP_13711886.1| carB [Escherichia coli DEC6E]
 gi|419811596|ref|ZP_14336470.1| carbamoyl phosphate synthase large subunit [Escherichia coli O32:H37
            str. P4]
 gi|422768285|ref|ZP_16822010.1| carbamoyl-phosphate synthase [Escherichia coli E1520]
 gi|422816052|ref|ZP_16864267.1| carbamoyl-phosphate synthase large chain [Escherichia coli M919]
 gi|425113344|ref|ZP_18515200.1| carbamoyl-phosphate synthase large chain [Escherichia coli 8.0566]
 gi|425118097|ref|ZP_18519852.1| carbamoyl-phosphate synthase large chain [Escherichia coli 8.0569]
 gi|425270736|ref|ZP_18662262.1| carbamoyl-phosphate synthase large chain [Escherichia coli TW15901]
 gi|425281361|ref|ZP_18672492.1| carbamoyl-phosphate synthase large chain [Escherichia coli TW00353]
 gi|432414991|ref|ZP_19657628.1| carbamoyl-phosphate synthase large chain [Escherichia coli KTE44]
 gi|432625596|ref|ZP_19861585.1| carbamoyl-phosphate synthase large chain [Escherichia coli KTE77]
 gi|432659304|ref|ZP_19894969.1| carbamoyl-phosphate synthase large chain [Escherichia coli KTE111]
 gi|432683917|ref|ZP_19919240.1| carbamoyl-phosphate synthase large chain [Escherichia coli KTE156]
 gi|432702580|ref|ZP_19937712.1| carbamoyl-phosphate synthase large chain [Escherichia coli KTE171]
 gi|432952431|ref|ZP_20145437.1| carbamoyl-phosphate synthase large chain [Escherichia coli KTE197]
 gi|169756537|gb|ACA79236.1| carbamoyl-phosphate synthase, large subunit [Escherichia coli ATCC
            8739]
 gi|301073536|gb|EFK88342.1| carbamoyl-phosphate synthase, large subunit [Escherichia coli MS
            146-1]
 gi|309700246|emb|CBI99534.1| carbamoyl-phosphate synthase large chain [Escherichia coli ETEC
            H10407]
 gi|315616190|gb|EFU96809.1| carbamoyl-phosphate synthase large chain [Escherichia coli 3431]
 gi|323935085|gb|EGB31452.1| carbamoyl-phosphate synthase [Escherichia coli E1520]
 gi|331040228|gb|EGI12435.1| carbamoyl-phosphate synthase, large subunit [Escherichia coli H736]
 gi|332341364|gb|AEE54698.1| carbamoyl-phosphate synthase, large subunit CarB [Escherichia coli
            UMNK88]
 gi|339413018|gb|AEJ54690.1| carbamoyl-phosphate synthase large chain [Escherichia coli UMNF18]
 gi|345392022|gb|EGX21808.1| carbamoyl-phosphate synthase large chain [Escherichia coli
            STEC_S1191]
 gi|377989486|gb|EHV52653.1| carbamoyl-phosphate synthase large chain [Escherichia coli DEC6C]
 gi|378000910|gb|EHV63972.1| carbamoyl-phosphate synthase large chain [Escherichia coli DEC6A]
 gi|378002475|gb|EHV65526.1| carB [Escherichia coli DEC6B]
 gi|378005030|gb|EHV68039.1| carB [Escherichia coli DEC6E]
 gi|378015952|gb|EHV78842.1| carbamoyl-phosphate synthase large chain [Escherichia coli DEC6D]
 gi|385155640|gb|EIF17642.1| carbamoyl phosphate synthase large subunit [Escherichia coli O32:H37
            str. P4]
 gi|385540451|gb|EIF87272.1| carbamoyl-phosphate synthase large chain [Escherichia coli M919]
 gi|386223009|gb|EII45423.1| carbamoyl-phosphate synthase, large subunit [Escherichia coli 2.3916]
 gi|386239270|gb|EII76200.1| carbamoyl-phosphate synthase, large subunit [Escherichia coli 3.2303]
 gi|408200873|gb|EKI26048.1| carbamoyl-phosphate synthase large chain [Escherichia coli TW15901]
 gi|408206797|gb|EKI31563.1| carbamoyl-phosphate synthase large chain [Escherichia coli TW00353]
 gi|408574062|gb|EKK49857.1| carbamoyl-phosphate synthase large chain [Escherichia coli 8.0566]
 gi|408574741|gb|EKK50500.1| carbamoyl-phosphate synthase large chain [Escherichia coli 8.0569]
 gi|430945173|gb|ELC65253.1| carbamoyl-phosphate synthase large chain [Escherichia coli KTE44]
 gi|431165948|gb|ELE66275.1| carbamoyl-phosphate synthase large chain [Escherichia coli KTE77]
 gi|431204126|gb|ELF02699.1| carbamoyl-phosphate synthase large chain [Escherichia coli KTE111]
 gi|431225835|gb|ELF23021.1| carbamoyl-phosphate synthase large chain [Escherichia coli KTE156]
 gi|431247981|gb|ELF42190.1| carbamoyl-phosphate synthase large chain [Escherichia coli KTE171]
 gi|431473779|gb|ELH53612.1| carbamoyl-phosphate synthase large chain [Escherichia coli KTE197]
          Length = 1073

 Score = 1226 bits (3171), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 618/1071 (57%), Positives = 781/1071 (72%), Gaps = 19/1071 (1%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILILGAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  E+V +++EKERPDA+LPTMGGQTALN A+ L   G LE++GV +IGA  DA
Sbjct: 63   ATYIEPIHWEVVRKIIEKERPDAVLPTMGGQTALNCALELERQGVLEEFGVTMIGATADA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  F  AMK IG++T  SGI +T++E +++A ++G FP IIRP+FT+GG+GGGI
Sbjct: 123  IDKAEDRRRFDVAMKKIGLETARSGIAHTMEEALAVAADVG-FPCIIRPSFTMGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEFE IC  GL  S T ++L+++SL+GWKEYE+EV+RD  DN +I+CSIEN D MG
Sbjct: 182  AYNREEFEEICARGLDLSPTKELLIDESLIGWKEYEMEVVRDKNDNCIIVCSIENFDAMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            +HTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGVE GGSNVQFAVNP +G ++VIEMN
Sbjct: 242  IHTGDSITVAPAQTLTDKEYQIMRNASMAVLREIGVETGGSNVQFAVNPKNGRLIVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT  +TPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGYTLDELMNDITGGRTPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            F FEKF G+   LTTQMKSVGE MA+GRT QES QKALR LE G +G+      +     
Sbjct: 362  FNFEKFAGANDRLTTQMKSVGEVMAIGRTQQESLQKALRGLEVGATGFDPKVSLDDPEAL 421

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
             +++  L+    DR+  I  A + G+ VD +  L+ ID+WFL Q +EL+ +E+ +    +
Sbjct: 422  TKIRRELKDAGADRIWYIADAFRAGLSVDGVFNLTNIDRWFLVQIEELVRLEEKVAEVGI 481

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
            + +  +   ++KR+GF+D ++A      E E+R+ R    + P YKRVDTCAAEF  +T 
Sbjct: 482  TGLNAEFLRQLKRKGFADARLAKLAGVREAEIRKLRDQYDLHPVYKRVDTCAAEFATDTA 541

Query: 627  YMYSSYDFECESAP-TQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNS 685
            YMYS+Y+ ECE+ P T ++K+++LGGGPNRIGQGIEFDYCC H S +L+  GYETIM+N 
Sbjct: 542  YMYSTYEEECEANPSTDREKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVNC 601

Query: 686  NPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEH 745
            NPETVSTDYDTSDRLYFEP+T+EDVL ++ +E+P+G+IVQ+GGQTPLKL+          
Sbjct: 602  NPETVSTDYDTSDRLYFEPVTLEDVLEIVRIEKPKGVIVQYGGQTPLKLA---------- 651

Query: 746  RLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEI 805
            R   A+G   V + GTSPD+ID AEDRERF   +  L ++QP      +   A+  AKEI
Sbjct: 652  RALEAAG---VPVIGTSPDAIDRAEDRERFQHAVDRLKLKQPANATVTAIEMAVEKAKEI 708

Query: 806  GYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALA 865
            GYP+VVRPSYVLGGRAMEIVY +  L  Y + AV V  + PVL+D +L DA+E+DVDA+ 
Sbjct: 709  GYPLVVRPSYVLGGRAMEIVYDEADLRRYFQTAVSVSNDAPVLLDHFLDDAVEVDVDAIC 768

Query: 866  DSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMN 925
            D    V+IGGIMEHIEQAGVHSGDSAC +P  T+S    D +     KLA  L V GLMN
Sbjct: 769  DG-EMVLIGGIMEHIEQAGVHSGDSACSLPAYTLSQEIQDVMRQQVQKLAFELQVRGLMN 827

Query: 926  CQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPK 985
             Q+A+  + +VYL+E NPRA+RTVPFVSKA G PLAK AA VM+GKSL + G TKEVIP 
Sbjct: 828  VQFAVKNN-EVYLIEVNPRAARTVPFVSKATGVPLAKVAARVMAGKSLAEQGVTKEVIPP 886

Query: 986  HVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVF 1045
            + SVKE VLPF KF G D LLGPEMRSTGEVMG+  +F  AFAKAQ+ +   +   G   
Sbjct: 887  YYSVKEVVLPFNKFPGVDPLLGPEMRSTGEVMGVGRTFAEAFAKAQLGSNSTMKKHGRAL 946

Query: 1046 LSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVA 1105
            LS+ +  K  +  +A   L  GF++ +T GTA  L   GI    V K+HEGRPH  D + 
Sbjct: 947  LSVREGDKERVVDLAAKLLKQGFELDATHGTAIVLGEAGINPRLVNKVHEGRPHIQDRIK 1006

Query: 1106 NGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRS 1156
            NG+   ++ T+SG    + D   +RR  L YKV   TT++G  A A A+ +
Sbjct: 1007 NGEYTYIINTTSGRRAIE-DSRVIRRSALQYKVHYDTTLNGGFATAMALNA 1056


>gi|157147550|ref|YP_001454869.1| carbamoyl phosphate synthase large subunit [Citrobacter koseri ATCC
            BAA-895]
 gi|157084755|gb|ABV14433.1| hypothetical protein CKO_03350 [Citrobacter koseri ATCC BAA-895]
          Length = 1074

 Score = 1225 bits (3170), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 617/1071 (57%), Positives = 779/1071 (72%), Gaps = 19/1071 (1%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILILGAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  E+V +++EKERPDA+LPTMGGQTALN A+ L   G L ++GV +IGA  DA
Sbjct: 63   ATYIEPIHWEVVRKIIEKERPDAVLPTMGGQTALNCALELERQGVLAEFGVTMIGATADA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  F  AMK IG+ T  SGI +T++E +++A ++G +P IIRP+FT+GGTGGGI
Sbjct: 123  IDKAEDRRRFDVAMKKIGLDTARSGIAHTMEEALAVAADVG-YPCIIRPSFTMGGTGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEFE IC  GL  S T+++L+++SL+GWKEYE+EV+RD  DN +I+CSIEN D MG
Sbjct: 182  AYNREEFEEICARGLDLSPTNELLIDESLIGWKEYEMEVVRDKNDNCIIVCSIENFDAMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            +HTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGVE GGSNVQFAVNP +G ++VIEMN
Sbjct: 242  IHTGDSITVAPAQTLTDKEYQIMRNASMAVLREIGVETGGSNVQFAVNPKNGRLIVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT  +TPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGYTLDELMNDITGGRTPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            F FEKF GS   LTTQMKSVGE MA+GRT QES QKALR LE G +G+      +     
Sbjct: 362  FNFEKFAGSNDRLTTQMKSVGEVMAIGRTQQESLQKALRGLEVGAAGFDPKVSLDDPEAL 421

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
             +++  L+    +R+  I  A + G+ VD +  L+ ID+WFL Q +EL+ +E+ +    +
Sbjct: 422  TKIRRELKDAGAERIWYIADAFRAGLSVDGVFNLTNIDRWFLVQIEELVRLEEKVAELGI 481

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
            + +  D    +KR+GF+D ++A      E EVR+ R    + P YKRVDTCAAEF  +T 
Sbjct: 482  TGLDADFLRMLKRKGFADARLAKLAGVREAEVRKLRDQFNLHPVYKRVDTCAAEFATDTA 541

Query: 627  YMYSSYDFECESAPTQ-KKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNS 685
            YMYS+Y+ ECE+ P Q + K+++LGGGPNRIGQGIEFDYCC H S +L+  GYETIM+N 
Sbjct: 542  YMYSTYEDECEANPNQDRDKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVNC 601

Query: 686  NPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEH 745
            NPETVSTDYDTSDRLYFEP+T+EDVL ++ +E+P+G+IVQ+GGQTPLKL+          
Sbjct: 602  NPETVSTDYDTSDRLYFEPVTLEDVLEIVRVEKPKGVIVQYGGQTPLKLA---------- 651

Query: 746  RLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEI 805
            R   A+G   V + GTSPD+ID AEDRERF   +  L ++QP      +   A+  AKEI
Sbjct: 652  RALEAAG---VPVIGTSPDAIDRAEDRERFQQAVDRLKLKQPANATVTAIEQAVEKAKEI 708

Query: 806  GYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALA 865
            GYP+VVRPSYVLGGRAMEIVY +  L  Y + AV V  + PVL+D++L DA+E+DVDA+ 
Sbjct: 709  GYPLVVRPSYVLGGRAMEIVYDEADLRRYFQTAVSVSNDAPVLLDRFLDDAVEVDVDAIC 768

Query: 866  DSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMN 925
            D    V+IGGIMEHIEQAGVHSGDSAC +P  T+S    D +     KLA  L V GLMN
Sbjct: 769  DG-EMVLIGGIMEHIEQAGVHSGDSACSLPAYTLSKEIQDVMRQQVQKLAFELQVRGLMN 827

Query: 926  CQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPK 985
             Q+A+  + +VYL+E NPRA+RTVPFVSKA G PLAK AA VM+GKSL + G TKE+IP 
Sbjct: 828  VQFAVKDN-EVYLIEVNPRAARTVPFVSKATGLPLAKVAARVMAGKSLTEQGVTKEIIPP 886

Query: 986  HVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVF 1045
            + SVKE VLPF KF G D LLGPEMRSTGEVMG+  +F  AFAKAQ+ +   +  SG   
Sbjct: 887  YYSVKEVVLPFNKFPGVDPLLGPEMRSTGEVMGVGRTFAEAFAKAQLGSSSTMKKSGRAL 946

Query: 1046 LSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVA 1105
            LS+ +  K  +  +A   L  GF++ +T GTA  L   GI    V K+HEGRPH  D + 
Sbjct: 947  LSVREGDKERVVDLAAKLLKQGFELDATHGTAIVLGEAGINPRLVNKVHEGRPHIQDRIK 1006

Query: 1106 NGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRS 1156
            NG+   ++ T++G    + D   +RR  L YKV   TT++G  A   A+ +
Sbjct: 1007 NGEYTYIINTTAGRQAIE-DSKLIRRSALQYKVHYDTTLNGGFATTMALNA 1056


>gi|407790490|ref|ZP_11137584.1| carbamoyl phosphate synthase large subunit [Gallaecimonas xiamenensis
            3-C-1]
 gi|407204038|gb|EKE74020.1| carbamoyl phosphate synthase large subunit [Gallaecimonas xiamenensis
            3-C-1]
          Length = 1071

 Score = 1225 bits (3170), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 619/1067 (58%), Positives = 784/1067 (73%), Gaps = 26/1067 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILILGAGPIVIGQACEFDYSGTQACKALKEEGY VIL+NSNPATIMTDPG+AD
Sbjct: 3    KRTDIQSILILGAGPIVIGQACEFDYSGTQACKALKEEGYRVILVNSNPATIMTDPGMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  E+V +++EKERPDA+LPTMGGQTALN A+ L + G LEK+GV++IGA  DA
Sbjct: 63   ATYIEPVHWEVVAKIIEKERPDAVLPTMGGQTALNCALDLDKHGVLEKFGVQMIGATADA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR+ F +AM  I +  P + I ++ ++C  I ++IG  P IIRP+FT+GGTGGGI
Sbjct: 123  IDKAEDRERFVEAMANINLDVPRARIAHSWEDCEDIIDDIG-LPCIIRPSFTMGGTGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYNKEE+E IC+ GL  S T+++L+++SL+GWKEYE+EV+RD  DN +I+CSIEN DPMG
Sbjct: 182  AYNKEEYEEICRRGLDLSPTNELLIDESLIGWKEYEMEVVRDRNDNAIIVCSIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            +HTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGVE GGSNVQF VNP DG ++VIEMN
Sbjct: 242  IHTGDSITVAPAQTLTDKEYQIMRNASLAVLREIGVETGGSNVQFGVNPKDGRMVVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT  KTPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGYTLDELMNDITGGKTPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            F FEKF G+   LTTQMKSVGE MA+GR  QES QKALR LE G SG+    + +LD D 
Sbjct: 362  FNFEKFAGANDRLTTQMKSVGEVMAIGRNQQESLQKALRGLEVGVSGF--DPILDLD-DP 418

Query: 507  EQ---LKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLT 563
            E    L+  L+    DR+  I  A + GM VD + +L+ ID WFL Q ++L+  EQ +  
Sbjct: 419  EALAILRRELKEAGSDRIWYIADAFRAGMSVDGVFKLTNIDPWFLVQIEDLVKEEQKVAE 478

Query: 564  QSVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEA 623
            + ++ +      ++KR+GF D ++A      E EVR+ R + G+ P YKRVDTCAAEF  
Sbjct: 479  KGLAGLDAGYLRQLKRKGFGDARLAAILGVAESEVRKIRHNNGIFPVYKRVDTCAAEFAT 538

Query: 624  NTPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMM 683
            +T YMYSSYD ECE+ P+ + K+++LGGGPNRIGQGIEFDYCC H + +++  GYETIM+
Sbjct: 539  STAYMYSSYDEECEANPSDRDKIMVLGGGPNRIGQGIEFDYCCVHAALAMREDGYETIMV 598

Query: 684  NSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLD 743
            N NPETVSTDYDTSDRLYFEP+T EDVL ++ LE+P+G+IVQ+GGQTPLKL+        
Sbjct: 599  NCNPETVSTDYDTSDRLYFEPVTFEDVLEIVRLEKPKGVIVQYGGQTPLKLA-------- 650

Query: 744  EHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAK 803
              R   A+G   V I GTSPD+ID +EDRERF   ++ L ++QP+     +   A+ +A+
Sbjct: 651  --RALEAAG---VPIIGTSPDAIDRSEDRERFQQAVERLGLKQPENATVTNLEQAIVLAR 705

Query: 804  EIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDA 863
            +IGYP+VVRPSYVLGGRAMEIVY +  L  Y+ +AV+V  + PVL+D++L DA+E+D+DA
Sbjct: 706  DIGYPLVVRPSYVLGGRAMEIVYDEVDLRRYMNDAVKVSNDSPVLLDRFLDDAVEVDIDA 765

Query: 864  LADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGL 923
            + D   +V+IGGIMEHIEQAGVHSGDS C +P  T+S    D +     KLA  LNV GL
Sbjct: 766  ICDG-KDVLIGGIMEHIEQAGVHSGDSGCSLPPYTLSKDVQDRMREQVRKLAFELNVIGL 824

Query: 924  MNCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVI 983
            MN Q+A+  + ++YL+E NPRASRTVPFVSKA G  LAK AA VM+G+SL + G T EVI
Sbjct: 825  MNIQFAVKDN-EIYLIEVNPRASRTVPFVSKATGLSLAKIAARVMAGQSLAEQGVTSEVI 883

Query: 984  PKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGT 1043
            P +  VKEAVLPF KF G D +LGPEMRSTGEVMG+  +F  A+AK+Q+ A    P  G 
Sbjct: 884  PPYYCVKEAVLPFAKFPGVDPILGPEMRSTGEVMGVGKTFAEAYAKSQLGANSVTPKGGR 943

Query: 1044 VFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDM 1103
              LS+ D  K     +A   L++GF++ +T GTA  L   GI    V K+HEGRPH  D 
Sbjct: 944  ALLSVRDTDKARAVDLAHRLLELGFELDATHGTAVVLGEAGINPRLVNKVHEGRPHILDR 1003

Query: 1104 VANGQIQMMVITSSGDSLDQIDGLKLRRRG-LAYKVPVITTVSGALA 1149
            + NG+   ++ T+ G     I+  K+ RRG L  KV   TT++   A
Sbjct: 1004 IKNGEYSYIINTTEGRQ--AIEDSKVMRRGALMNKVSYTTTLNAGFA 1048


>gi|381405723|ref|ZP_09930407.1| carbamoyl phosphate synthase large subunit [Pantoea sp. Sc1]
 gi|380738922|gb|EIB99985.1| carbamoyl phosphate synthase large subunit [Pantoea sp. Sc1]
          Length = 1075

 Score = 1225 bits (3170), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 616/1071 (57%), Positives = 781/1071 (72%), Gaps = 19/1071 (1%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILILGAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  E+V +++EKERPDA+LPTMGGQTALN A+ L   G LE++GV +IGA  DA
Sbjct: 63   ATYIEPIHWEVVRKIIEKERPDAVLPTMGGQTALNCALELERQGVLEEFGVTMIGATADA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  F  AMK+IG+ T  SGI +T++E +++A ++G FP IIRP+FT+GGTGGGI
Sbjct: 123  IDKAEDRRRFDVAMKSIGLDTARSGIAHTMEEALAVAEDVG-FPCIIRPSFTMGGTGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEFE IC+ GL  S T+++L+++SL+GWKEYE+EV+RD  DN +I+CSIEN D MG
Sbjct: 182  AYNREEFEEICERGLDLSPTNELLIDESLIGWKEYEMEVVRDKNDNCIIVCSIENFDAMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            +HTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGVE GGSNVQF+VNP DG ++VIEMN
Sbjct: 242  IHTGDSITVAPAQTLTDKEYQIMRNASLAVLREIGVETGGSNVQFSVNPKDGRLIVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKK-TPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VG++LD++ NDIT   TPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGFTLDELMNDITGGLTPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            F FEKF G+   LTTQMKSVGE MA+GRTFQES QKALR LE G  G+      +     
Sbjct: 362  FNFEKFAGANDRLTTQMKSVGEVMAIGRTFQESVQKALRGLEVGAHGFDPKVHLDDPEAL 421

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
             +++  L+    DR+  I  A + GM VD +  L+ ID+WFL Q +ELI +E  +  + V
Sbjct: 422  TRIRRELKDAGSDRIWYIADAFRAGMSVDGVFNLTNIDRWFLVQIEELIRLEDQVAREGV 481

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
            +++       +KR+GF+D ++A      E E+R+ R    + P YKRVDTCAAEF  +T 
Sbjct: 482  NSLDATFLRALKRKGFADARLAALAGVAESEIRKLRQQFNLHPVYKRVDTCAAEFATDTA 541

Query: 627  YMYSSYDFECESAP-TQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNS 685
            YMYS+Y+ ECE+ P T + K++ILGGGPNRIGQGIEFDYCC H + +L+  GY+TIM+N 
Sbjct: 542  YMYSTYEEECEANPATDRDKIMILGGGPNRIGQGIEFDYCCVHAALALREDGYQTIMVNC 601

Query: 686  NPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEH 745
            NPETVSTDYDTSDRLYFEP+T+EDVL ++ +E+P+G+IVQ+GGQTPLKL+          
Sbjct: 602  NPETVSTDYDTSDRLYFEPVTLEDVLEIVRIEQPKGVIVQYGGQTPLKLA---------- 651

Query: 746  RLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEI 805
            R   A+G   V + GTSPDSID AEDRERF   +  LS++QP      +   A+  A  +
Sbjct: 652  RALEAAG---VPVIGTSPDSIDRAEDRERFQQAVDRLSLKQPANATVATLEQAVEKAAGL 708

Query: 806  GYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALA 865
            GYP+VVRPSYVLGGRAMEIVY +  L  Y + AV V  + PVL+D++L DA+E+DVDA+ 
Sbjct: 709  GYPLVVRPSYVLGGRAMEIVYDETDLKRYFQTAVSVSNDAPVLLDRFLDDAVEVDVDAIC 768

Query: 866  DSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMN 925
            D    V+IGGIMEHIEQAGVHSGDSAC +P  T++    + +     KLA  LNV GLMN
Sbjct: 769  DG-ERVLIGGIMEHIEQAGVHSGDSACSLPAYTLNQEIQNVMRQQVEKLAFELNVRGLMN 827

Query: 926  CQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPK 985
             Q+A+  + +VYL+E NPRA+RTVPFVSKA G PLAK AA VM+GK+L + G T+EVIP 
Sbjct: 828  VQFAVKDN-EVYLIEVNPRAARTVPFVSKATGVPLAKVAARVMAGKTLAEQGVTEEVIPP 886

Query: 986  HVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVF 1045
            + SVKE VLPF KFQG D +LGPEMRSTGEVMG+  +F  AF+KA + A   +  SG   
Sbjct: 887  YYSVKEVVLPFNKFQGVDPILGPEMRSTGEVMGVGRTFAEAFSKAMLGAQSNMKKSGRAL 946

Query: 1046 LSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVA 1105
            LS+ +  K  +  +A      GF++ +T GTA  L   GI    V K+HEGRPH  D + 
Sbjct: 947  LSVREGDKKRIVDLAAKLQKFGFELDATHGTAVVLGEAGINPRLVNKVHEGRPHIQDRLK 1006

Query: 1106 NGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRS 1156
            NG+   +V T++G    + D   +RR  L YKV   TT++G  A A A+ +
Sbjct: 1007 NGEYSYIVNTTAGRQAIE-DSKLIRRSALQYKVHYDTTLNGGFATAMALNA 1056


>gi|422828363|ref|ZP_16876534.1| carbamoyl-phosphate synthase large subunit [Escherichia coli B093]
 gi|371614399|gb|EHO02883.1| carbamoyl-phosphate synthase large subunit [Escherichia coli B093]
          Length = 1073

 Score = 1225 bits (3170), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 617/1071 (57%), Positives = 782/1071 (73%), Gaps = 19/1071 (1%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILILGAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  E+V +++EKERPDA+LPTMGGQTALN A+ L   G LE++GV +IGA  DA
Sbjct: 63   ATYIEPIHWEVVRKIIEKERPDAVLPTMGGQTALNCALELERQGVLEEFGVTMIGATADA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  F  AMK IG++T  SGI +T++E +++A ++G FP IIRP+FT+GG+GGGI
Sbjct: 123  IDKAEDRRRFDVAMKKIGLETARSGIAHTMEEALAVAADVG-FPCIIRPSFTMGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEFE IC  GL  S T ++L+++SL+GWKEYE+EV+RD  DN +I+CSIEN D MG
Sbjct: 182  AYNREEFEEICARGLDLSPTKELLIDESLIGWKEYEMEVVRDKNDNCIIVCSIENFDAMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            +HTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGVE GGSNVQFAVNP +G ++VIEMN
Sbjct: 242  IHTGDSITVAPAQTLTDKEYQIMRNASMAVLREIGVETGGSNVQFAVNPKNGRLIVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT  +TPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGYTLDELMNDITGGRTPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            F FEKF G+   LTTQMKSVGE MA+GRT QES QKALR LE G +G+      +     
Sbjct: 362  FNFEKFAGANDRLTTQMKSVGEVMAIGRTQQESLQKALRGLEVGATGFDPKVSLDDPEAL 421

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
             +++  L+    +R+  I  A + G+ VD +  L+ ID+WFL Q +EL+ +E+ +    +
Sbjct: 422  TKIRRELKDAGAERIWYIADAFRAGLSVDGVFNLTNIDRWFLVQIEELVRLEEKVAEVGI 481

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
            + +  D   ++KR+GF+D ++A      E E+R+ R    + P YKRVDTCAAEF  +T 
Sbjct: 482  TGLNADFLRQLKRKGFADARLAKLAGVREAEIRKLRDQYDLHPVYKRVDTCAAEFATDTA 541

Query: 627  YMYSSYDFECESAP-TQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNS 685
            YMYS+Y+ ECE+ P T ++K+++LGGGPNRIGQGIEFDYCC H S +L+  GYETIM+N 
Sbjct: 542  YMYSTYEEECEANPSTDREKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVNC 601

Query: 686  NPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEH 745
            NPETVSTDYDTSDRLYFEP+T+EDVL ++ +E+P+G+IVQ+GGQTPLKL+          
Sbjct: 602  NPETVSTDYDTSDRLYFEPVTLEDVLEIVRIEKPKGVIVQYGGQTPLKLA---------- 651

Query: 746  RLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEI 805
            R   A+G   V + GTSPD+ID AEDRERF   ++ L ++QP      +   A+  AKEI
Sbjct: 652  RALEAAG---VPVIGTSPDAIDRAEDRERFQHAVERLKLKQPANATVTTIEMAVEKAKEI 708

Query: 806  GYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALA 865
            GYP+VVRPSYVLGGRAMEIVY +  L  Y + AV V  + PVL+D +L DA+E+DVDA+ 
Sbjct: 709  GYPLVVRPSYVLGGRAMEIVYDEADLRRYFQTAVSVSNDAPVLLDHFLDDAVEVDVDAIC 768

Query: 866  DSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMN 925
            D    V+IGGIMEHIEQAGVHSGDSAC +P  T+S    D +     KLA  L V GLMN
Sbjct: 769  DG-EMVLIGGIMEHIEQAGVHSGDSACSLPAYTLSQEIQDVMRQQVQKLAFELQVRGLMN 827

Query: 926  CQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPK 985
             Q+A+  + +VYL+E NPRA+RTVPFVSKA G PLAK AA VM+GK+L + G TKEVIP 
Sbjct: 828  VQFAVKNN-EVYLIEVNPRAARTVPFVSKATGVPLAKVAARVMAGKTLAEQGVTKEVIPP 886

Query: 986  HVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVF 1045
            + SVKE VLPF KF G D LLGPEMRSTGEVMG+  +F  AFAKAQ+ +   +   G   
Sbjct: 887  YYSVKEVVLPFNKFPGVDPLLGPEMRSTGEVMGVGRTFAEAFAKAQLGSNSTMKKHGRAL 946

Query: 1046 LSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVA 1105
            LS+ +  K  +  +A   L  GF++ +T GTA  L   GI    V K+HEGRPH  D + 
Sbjct: 947  LSVREGDKERVVDLAAKLLKQGFELDATHGTAIVLGEAGINPRLVNKVHEGRPHIQDRIK 1006

Query: 1106 NGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRS 1156
            NG+   ++ T+SG    + D   +RR  L YKV   TT++G  A A A+ +
Sbjct: 1007 NGEYTYIINTTSGRRAIE-DSRVIRRSALQYKVHYDTTLNGGFATAMALNA 1056


>gi|117919417|ref|YP_868609.1| carbamoyl phosphate synthase large subunit [Shewanella sp. ANA-3]
 gi|117611749|gb|ABK47203.1| carbamoyl-phosphate synthase large subunit [Shewanella sp. ANA-3]
          Length = 1074

 Score = 1225 bits (3170), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 614/1078 (56%), Positives = 784/1078 (72%), Gaps = 20/1078 (1%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILILGAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  E+V  ++ KERPDA+LPTMGGQTALN A+ L   G L ++ VE+IGA  DA
Sbjct: 63   ATYIEPIQWEVVRNIIAKERPDAILPTMGGQTALNCALELEAKGVLAEFNVEMIGATADA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  F +AMK+IG++ P +GI ++++E   + + +G FP IIRP+FT+GG+GGGI
Sbjct: 123  IDKAEDRSRFDKAMKSIGLECPRAGIAHSMEEAYGVLDLVG-FPCIIRPSFTMGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYNKEEFE IC  GL  S T ++L+++SL+GWKEYE+EV+RD  DN +I+CSIEN DPMG
Sbjct: 182  AYNKEEFEEICSQGLDLSPTKELLIDESLIGWKEYEMEVVRDRNDNCIIVCSIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGVE GGSNVQF +NP DG +++IEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQLMRNASMAVLREIGVETGGSNVQFGINPKDGRMVIIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VG++LD++ NDIT  +TPASFEP+IDYVVTK+PR
Sbjct: 302  PRVSRSSALASKATGFPIAKIAAKLAVGFTLDELMNDITGGRTPASFEPAIDYVVTKVPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWG-CSNVKELDWD 505
            F FEKF GS   LTTQMKSVGE MA+GRTFQES QKALR LE    G+   +++ + D  
Sbjct: 362  FNFEKFAGSNDRLTTQMKSVGEVMAIGRTFQESLQKALRGLEVSRHGFDPITDLTKADA- 420

Query: 506  WEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQS 565
              +++  L+ P  DR+  I  AM+ G+ +DEI  L+ ID WFL Q +ELI +E  +    
Sbjct: 421  LARIRLELKEPGCDRIWYIADAMRAGLTLDEIFRLTNIDPWFLVQIEELIKLEGQVAEGG 480

Query: 566  VSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANT 625
            ++ + ++   ++KR+GF+D ++A      E EVR+ R    + P YKRVDTCAAEF  +T
Sbjct: 481  LAGLNEELLRKLKRKGFADARLAAVLGVNETEVRKLRDRFDIHPVYKRVDTCAAEFATDT 540

Query: 626  PYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNS 685
             YMYS+Y+ ECE+ P+ ++K+++LGGGPNRIGQGIEFDYCC H + +L+  GYETIM+N 
Sbjct: 541  AYMYSTYEEECEANPSDREKIMVLGGGPNRIGQGIEFDYCCVHAALALREDGYETIMVNC 600

Query: 686  NPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEH 745
            NPETVSTDYDTSDRLYFEP+T+EDVL ++ +E+P+G+IVQ+GGQTPLKL+          
Sbjct: 601  NPETVSTDYDTSDRLYFEPVTLEDVLEIVRIEKPKGVIVQYGGQTPLKLA---------- 650

Query: 746  RLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEI 805
            R   A+G   V I GTSPD+ID AEDRERF   I+ L ++QP+     +   A+  A+ I
Sbjct: 651  RALEAAG---VPIIGTSPDAIDRAEDRERFQQAIQRLEMKQPENDTVTTVEGAVIAAERI 707

Query: 806  GYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALA 865
            GYP+VVRPSYVLGGRAMEIVY  + L+ Y   AV V    PVL+D +L DAIE+D+DA+ 
Sbjct: 708  GYPLVVRPSYVLGGRAMEIVYDQQDLLRYFNEAVSVSNASPVLLDHFLDDAIEVDIDAVC 767

Query: 866  DSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMN 925
            D    VVIG IMEHIEQAGVHSGDS C +P  T+S +  D +     KLA  L V GLMN
Sbjct: 768  DG-ETVVIGAIMEHIEQAGVHSGDSGCSLPPYTLSQAIQDEMRVQVRKLAMELGVVGLMN 826

Query: 926  CQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPK 985
             Q+A+  + ++Y++E NPRA+RTVPFVSKA G PLAK AA VM+G+SL    FT+EVIP 
Sbjct: 827  VQFAVKNN-EIYMIEVNPRAARTVPFVSKATGVPLAKIAARVMAGQSLKAQNFTQEVIPP 885

Query: 986  HVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVF 1045
              SVKE VLPF KF G D LLGPEMRSTGEVMG+  +F  A+AKAQ+ A  ++P SG   
Sbjct: 886  FYSVKEVVLPFNKFPGVDPLLGPEMRSTGEVMGVGDTFAEAYAKAQLGATSEVPKSGRAL 945

Query: 1046 LSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVA 1105
            LS+ +  K  +  +A   +++G++I +T GTA  L   GI    V K+HEGRPH  D + 
Sbjct: 946  LSVRNSDKKRVADLAAKLIELGYQIDATHGTAVILGEAGINPRLVNKVHEGRPHILDRIK 1005

Query: 1106 NGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTVT 1163
            NG+   +V T+ G    + D  +LRR  L YKV   TT++ A A   A  +     VT
Sbjct: 1006 NGEYTYIVNTTEGRQAIE-DSRQLRRGALRYKVNYTTTMNAAFATCMAHAADDRTNVT 1062


>gi|120597833|ref|YP_962407.1| carbamoyl phosphate synthase large subunit [Shewanella sp. W3-18-1]
 gi|146294029|ref|YP_001184453.1| carbamoyl phosphate synthase large subunit [Shewanella putrefaciens
            CN-32]
 gi|386314743|ref|YP_006010908.1| carbamoyl-phosphate synthase large subunit [Shewanella putrefaciens
            200]
 gi|120557926|gb|ABM23853.1| carbamoyl-phosphate synthase large subunit [Shewanella sp. W3-18-1]
 gi|145565719|gb|ABP76654.1| carbamoyl-phosphate synthase large subunit [Shewanella putrefaciens
            CN-32]
 gi|319427368|gb|ADV55442.1| carbamoyl-phosphate synthase, large subunit [Shewanella putrefaciens
            200]
          Length = 1074

 Score = 1225 bits (3170), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 614/1077 (57%), Positives = 778/1077 (72%), Gaps = 18/1077 (1%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILILGAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  E+V  ++ KERPDA+LPTMGGQTALN A+ L   G L ++ VE+IGA  DA
Sbjct: 63   ATYIEPIHWEVVRNIIAKERPDAILPTMGGQTALNCALELEAKGVLAEFNVEMIGATADA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  F +AMK+IG++ P +GI ++++E   +  ++G FP IIRP+FT+GG+GGGI
Sbjct: 123  IDKAEDRSRFDKAMKSIGLECPRAGIAHSMEEAYGVLEQVG-FPCIIRPSFTMGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYNKEEFE IC  GL  S T ++L+++SL+GWKEYE+EV+RD  DN +I+CSIEN DPMG
Sbjct: 182  AYNKEEFEEICSQGLDLSPTKELLIDESLIGWKEYEMEVVRDRNDNCIIVCSIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGVE GGSNVQF +NP+DG +++IEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQIMRNASMAVLREIGVETGGSNVQFGINPIDGRMVIIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VG++LD++ NDIT  +TPASFEP+IDYVVTK+PR
Sbjct: 302  PRVSRSSALASKATGFPIAKIAAKLAVGFTLDELMNDITGGRTPASFEPAIDYVVTKVPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            F FEKF G+   LTTQMKSVGE MA+GRTFQES QKALR LE   +G             
Sbjct: 362  FNFEKFAGANDRLTTQMKSVGEVMAIGRTFQESLQKALRGLEVSRNGLDPITDMSKPEAM 421

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
             +++  L+ P  DR+  I  AM+ G+ +DEI  L+ ID WFL Q +ELI +E  +    +
Sbjct: 422  SRIRLELKEPGCDRIWYIADAMRAGLGLDEIFRLTNIDPWFLVQIEELIKLEGVVAEAGL 481

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
            + +  D   ++KR+GF+D ++A      E EVR+ R    + P YKRVDTCAAEF  +T 
Sbjct: 482  AGLDYDLLRKLKRKGFADARLADVLGVNEAEVRKLRDKFDLHPVYKRVDTCAAEFATDTA 541

Query: 627  YMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSN 686
            YMYS+Y+ ECE+ P+ ++K+++LGGGPNRIGQGIEFDYCC H + +L+  GYETIM+N N
Sbjct: 542  YMYSTYEEECEANPSDREKIMVLGGGPNRIGQGIEFDYCCVHAALALREDGYETIMVNCN 601

Query: 687  PETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHR 746
            PETVSTDYDTSDRLYFEP+T+EDVL ++ +E+P+G+IVQ+GGQTPLKL+          R
Sbjct: 602  PETVSTDYDTSDRLYFEPVTLEDVLEIVRIEKPKGVIVQYGGQTPLKLA----------R 651

Query: 747  LPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEIG 806
               A+G   V I GTSPD+ID AEDRERF   I+ L ++QP+     +   A+  A+ IG
Sbjct: 652  ALEAAG---VPIIGTSPDAIDRAEDRERFQQAIQRLEMKQPENDTVTTVEGAVIAAERIG 708

Query: 807  YPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALAD 866
            YP+VVRPSYVLGGRAMEIVY  + L+ Y   AV V    PVL+D +L DAIE+D+DA+ D
Sbjct: 709  YPLVVRPSYVLGGRAMEIVYDQQDLLRYFNEAVSVSNASPVLLDHFLDDAIEVDIDAVCD 768

Query: 867  SCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNC 926
                VVIG IMEHIEQAGVHSGDS C +P  T+S    D +     KLA  L V GLMN 
Sbjct: 769  G-ETVVIGAIMEHIEQAGVHSGDSGCSLPPYTLSQEIQDRMRVQVGKLAMELGVVGLMNV 827

Query: 927  QYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPKH 986
            Q+A+  + ++Y++E NPRA+RTVPFVSKA G PLAK AA VM+G+SL    FTKEVIP  
Sbjct: 828  QFAVKDN-EIYMIEVNPRAARTVPFVSKATGVPLAKIAARVMAGQSLKSQNFTKEVIPPF 886

Query: 987  VSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVFL 1046
             SVKE VLPF KF G D LLGPEMRSTGEVMG+  +F  A+AKAQ+ A  ++P SG   L
Sbjct: 887  YSVKEVVLPFNKFPGVDPLLGPEMRSTGEVMGVGDTFAEAYAKAQLGATAEVPKSGRALL 946

Query: 1047 SLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVAN 1106
            S+ +  K  +  +A   +++G++I +T GTA  L   GI    V K+HEGRPH  D + N
Sbjct: 947  SVRNSDKKRVADLAAKLIELGYQIDATHGTAIILGEAGINPRLVNKVHEGRPHILDRIKN 1006

Query: 1107 GQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTVT 1163
            G+   +V T+ G    + D  +LRR  L YKV   TT++ A A   A  +     VT
Sbjct: 1007 GEYTYIVNTTEGRQAIE-DSRQLRRGALRYKVNYTTTMNAAFATCMAHAADDRTNVT 1062


>gi|188493701|ref|ZP_03000971.1| carbamoyl-phosphate synthase, large subunit [Escherichia coli 53638]
 gi|188488900|gb|EDU64003.1| carbamoyl-phosphate synthase, large subunit [Escherichia coli 53638]
          Length = 1073

 Score = 1225 bits (3170), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 617/1071 (57%), Positives = 782/1071 (73%), Gaps = 19/1071 (1%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILILGAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  E+V +++EKERPDA+LPTMGGQTALN A+ L   G LE++GV +IGA  DA
Sbjct: 63   ATYIEPIHWEVVRKIIEKERPDAVLPTMGGQTALNCALELERQGVLEEFGVTMIGATADA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  F  AMK IG++T  SGI +T++E +++A ++G FP IIRP+FT+GG+GGGI
Sbjct: 123  IDKAEDRRRFDVAMKKIGLETARSGIAHTMEEALAVAADVG-FPCIIRPSFTMGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEFE IC  GL  S T ++L+++SL+GWKEYE+EV+RD  DN +I+CSIEN D MG
Sbjct: 182  AYNREEFEEICARGLDLSPTKELLIDESLIGWKEYEMEVVRDKNDNCIIVCSIENFDAMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            +HTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGVE GGSNVQFAVNP +G ++VIEMN
Sbjct: 242  IHTGDSITVAPAQTLTDKEYQIMRNASMAVLREIGVETGGSNVQFAVNPKNGRLIVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT  +TPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGYTLDELMNDITGGRTPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            F FEKF G+   LTTQMKSVGE MA+GRT QES QKALR LE G +G+      +     
Sbjct: 362  FNFEKFAGANDRLTTQMKSVGEVMAIGRTQQESLQKALRGLEVGATGFDPKVSLDDPEAL 421

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
             +++  L+    +R+  I  A + G+ VD +  L+ ID+WFL Q +EL+ +E+ +    +
Sbjct: 422  TKIRRELKDAGAERIWYIADAFRAGLSVDGVFNLTNIDRWFLVQIEELVRLEEKVAEVGI 481

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
            + +  +   ++KR+GF+D ++A      E E+R+ R    + P YKRVDTCAAEF  +T 
Sbjct: 482  TGLNAEFLRQLKRKGFADARLAKLAGVREAEIRKLRDQYDLHPVYKRVDTCAAEFATDTA 541

Query: 627  YMYSSYDFECESAP-TQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNS 685
            YMYS+Y+ ECE+ P T ++K+++LGGGPNRIGQGIEFDYCC H S +L+  GYETIM+N 
Sbjct: 542  YMYSTYEEECEANPSTDREKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVNC 601

Query: 686  NPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEH 745
            NPETVSTDYDTSDRLYFEP+T+EDVL ++ +E+P+G+IVQ+GGQTPLKL+          
Sbjct: 602  NPETVSTDYDTSDRLYFEPVTLEDVLEIVRIEKPKGVIVQYGGQTPLKLA---------- 651

Query: 746  RLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEI 805
            R   A+G   V + GTSPD+ID AEDRERF   ++ L ++QP      +   A+  AKEI
Sbjct: 652  RALEAAG---VPVIGTSPDAIDRAEDRERFQHAVERLKLKQPANATVTAIEMAVEKAKEI 708

Query: 806  GYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALA 865
            GYP+VVRPSYVLGGRAMEIVY +  L  Y + AV V  + PVL+D +L DA+E+DVDA+ 
Sbjct: 709  GYPLVVRPSYVLGGRAMEIVYDEADLRRYFQTAVSVSNDAPVLLDHFLDDAVEVDVDAIC 768

Query: 866  DSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMN 925
            D    V+IGGIMEHIEQAGVHSGDSAC +P  T+S    D +     KLA  L V GLMN
Sbjct: 769  DG-EMVLIGGIMEHIEQAGVHSGDSACSLPAYTLSQEIQDVMRQQVQKLAFELQVRGLMN 827

Query: 926  CQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPK 985
             Q+A+  + +VYL+E NPRA+RTVPFVSKA G PLAK AA VM+GKSL + G TKEVIP 
Sbjct: 828  VQFAVKNN-EVYLIEVNPRAARTVPFVSKATGVPLAKVAARVMAGKSLAEQGVTKEVIPS 886

Query: 986  HVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVF 1045
            + SVKE VLPF KF G D LLGPEMRSTGEVMG+  +F  AFAKAQ+ +   +   G   
Sbjct: 887  YYSVKEVVLPFNKFPGVDPLLGPEMRSTGEVMGVGRTFAEAFAKAQLGSNSTMKKHGRAL 946

Query: 1046 LSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVA 1105
            LS+ +  K  +  +A   L  GF++ +T GTA  L   GI    V K+HEGRPH  D + 
Sbjct: 947  LSVREGDKERVVDLAAKLLKQGFELDATHGTAIVLGEAGINPRLVNKVHEGRPHIQDRIK 1006

Query: 1106 NGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRS 1156
            NG+   ++ T+SG    + D   +RR  L YKV   TT++G  A A A+ +
Sbjct: 1007 NGEYTYIINTTSGRRAIE-DSRVIRRSALQYKVHYDTTLNGGFATAMALNA 1056


>gi|290474746|ref|YP_003467626.1| carbamoyl phosphate synthase, large subunit [Xenorhabdus bovienii
            SS-2004]
 gi|289174059|emb|CBJ80846.1| carbamoyl phosphate synthase, large subunit [Xenorhabdus bovienii
            SS-2004]
          Length = 1074

 Score = 1225 bits (3170), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 614/1071 (57%), Positives = 777/1071 (72%), Gaps = 19/1071 (1%)

Query: 86   LGKRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGL 145
            + KRTD++ ILILGAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +
Sbjct: 1    MAKRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEM 60

Query: 146  ADRTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKL 205
            AD TYI P+  E+V +++EKERPDA+LPTMGGQTALN A+ L   G L ++ V +IGA  
Sbjct: 61   ADATYIEPIHWEVVRKIIEKERPDAILPTMGGQTALNCALELERQGVLTEFSVTMIGATA 120

Query: 206  DAIKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGG 265
            DAI KAEDR  F +AMK IG+ T  SGI +T++E +++A ++G FP IIRP+FT+GG+GG
Sbjct: 121  DAIDKAEDRQRFDKAMKKIGLDTARSGIAHTMEEALAVAEDVG-FPCIIRPSFTMGGSGG 179

Query: 266  GIAYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDP 325
            GIAYN+EEFE IC+ GL  S T+++L+++SL+GWKEYE+EV+RD  DN +IICSIEN DP
Sbjct: 180  GIAYNREEFEEICERGLDLSPTNELLIDESLIGWKEYEMEVVRDKNDNCIIICSIENFDP 239

Query: 326  MGVHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIE 385
            MG+HTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGVE GGSNVQF+VNP +G ++VIE
Sbjct: 240  MGIHTGDSITVAPAQTLTDKEYQIMRNASMAVLREIGVETGGSNVQFSVNPKNGRLIVIE 299

Query: 386  MNPRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKI 444
            MNPRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT  +TPASFEPSIDYVVTKI
Sbjct: 300  MNPRVSRSSALASKATGFPIAKIAAKLAVGYTLDELMNDITGGRTPASFEPSIDYVVTKI 359

Query: 445  PRFAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDW 504
            PRF FEKF GS   LTTQMKSVGE MA+GRTFQES QKALR LE G +G+      +   
Sbjct: 360  PRFNFEKFAGSNDRLTTQMKSVGEVMAIGRTFQESMQKALRGLEVGVTGFDPKVNLDDPQ 419

Query: 505  DWEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQ 564
               +++  L+    +R+  +  A + GM +D +  L+ ID+WFL Q +EL+ +E+ +  Q
Sbjct: 420  SLTKIRSELKSAGAERIWYVADAFRAGMSIDGVFNLTNIDRWFLVQIEELVRLEEQVEEQ 479

Query: 565  SVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEAN 624
             ++ +T D    +KR+GF+D  +A     + KE+R+ R    + P YKRVDTCAAEF  +
Sbjct: 480  GINGLTFDFLRHLKRKGFADAHLAKLVGVSGKEIRKLRHDYNLYPVYKRVDTCAAEFSTD 539

Query: 625  TPYMYSSYDFECESAPTQKK-KVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMM 683
            T YMYS+Y+ ECES P   K K+++LGGGPNRIGQGIEFDYCC H S +L+  GYETIM+
Sbjct: 540  TAYMYSTYEDECESNPNHDKPKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMV 599

Query: 684  NSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLD 743
            N NPETVSTDYDTSDRLYFEP+T+EDVL ++ +E+P G+IVQ+GGQTPLKL+        
Sbjct: 600  NCNPETVSTDYDTSDRLYFEPVTLEDVLEIVRVEKPTGVIVQYGGQTPLKLA-------- 651

Query: 744  EHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAK 803
              R   A+G   V I GTSPD+ID AEDRERF   +  L ++QP      +   A+    
Sbjct: 652  --RELEAAG---VPIIGTSPDAIDRAEDRERFQQAVNRLGLKQPANATVSTIEQAVEKGN 706

Query: 804  EIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDA 863
             +GYP+VVRPSYVLGGRAMEIVY +  L  Y +NAV V  + PVL+D++L DA+E+DVDA
Sbjct: 707  GLGYPLVVRPSYVLGGRAMEIVYDETDLRRYFQNAVSVSNDAPVLLDRFLDDAVEVDVDA 766

Query: 864  LADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGL 923
            + D    V+IGGIMEHIEQAGVHSGDSAC +P  T+S    D +     KLA  L V GL
Sbjct: 767  ICDG-ERVLIGGIMEHIEQAGVHSGDSACSLPAYTLSQEIQDVMRQQVEKLAFELRVRGL 825

Query: 924  MNCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVI 983
            MN Q+A+  + +VYL+E NPRA+RTVPFVSKA G PLAK AA VM+G+SL   G TKE+I
Sbjct: 826  MNVQFAVKNN-EVYLIEVNPRAARTVPFVSKATGLPLAKVAARVMAGQSLLKQGVTKEII 884

Query: 984  PKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGT 1043
            P + SVKE VLPF KF G D +LGPEMRSTGEVMG+  +F  AF+KA + +   +   G 
Sbjct: 885  PPYYSVKEVVLPFNKFLGVDPILGPEMRSTGEVMGVGRTFAEAFSKAMLGSSSTMGKHGR 944

Query: 1044 VFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDM 1103
              LS+ +  K  +  +A   L  GF++ +T GTA  L   GI    V K+HEGRPH  D 
Sbjct: 945  ALLSVREEDKERVVDLAAKLLKQGFELDATHGTAIVLGEAGINPRLVNKVHEGRPHIQDR 1004

Query: 1104 VANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAI 1154
            + NG+   +V T++G    + D   LRR  L YKV   TT++G  A   A+
Sbjct: 1005 IKNGEYNYIVNTTAGRQAIE-DSKLLRRSALQYKVHYDTTLNGGFATTMAL 1054


>gi|417710656|ref|ZP_12359666.1| carbamoyl-phosphate synthase large chain [Shigella flexneri K-272]
 gi|417715318|ref|ZP_12364256.1| carbamoyl-phosphate synthase large chain [Shigella flexneri K-227]
 gi|333011414|gb|EGK30828.1| carbamoyl-phosphate synthase large chain [Shigella flexneri K-272]
 gi|333021653|gb|EGK40902.1| carbamoyl-phosphate synthase large chain [Shigella flexneri K-227]
          Length = 1073

 Score = 1225 bits (3170), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 618/1071 (57%), Positives = 782/1071 (73%), Gaps = 19/1071 (1%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILILGAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  E+V +++EKERPDA+LPTMGGQTALN A+ L   G LE++GV +IGA  DA
Sbjct: 63   ATYIEPIHWEVVRKIIEKERPDAVLPTMGGQTALNCALELERQGVLEEFGVTMIGATADA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  F  AMK IG++T  SGI +T++E +++A ++G FP IIRP+FT+GG+GGGI
Sbjct: 123  IDKAEDRRRFDVAMKKIGLETARSGIAHTMEEALAVAADVG-FPCIIRPSFTMGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEFE IC  GL  S T ++L+++SL+GWKEYE+EV+RD  DN +I+CSIEN D MG
Sbjct: 182  AYNREEFEEICARGLDLSPTKELLIDESLIGWKEYEMEVVRDKNDNCIIVCSIENFDAMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            +HTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGVE GGSNVQFAVNP +G ++VIEMN
Sbjct: 242  IHTGDSITVAPAQTLTDKEYQIMRNASMAVLREIGVETGGSNVQFAVNPKNGRLIVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT  +TPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGYTLDELMNDITGGRTPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            F FEKF G+   LTTQMKSVGE MA+GRT QES QKALR LE G +G+      +     
Sbjct: 362  FNFEKFAGANDRLTTQMKSVGEVMAIGRTQQESLQKALRGLEVGATGFDPKVSLDDPEAL 421

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
             +++  L+    +R+  I  A + G+ VD +  L+ ID+WFL Q +EL+ +E+ +    +
Sbjct: 422  TKIRRELKDAGAERIWYIADAFRAGLSVDGVFNLTNIDRWFLVQIEELVRLEEKVAEVGI 481

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
            + +  +   ++KR+GF+D ++A      E E+R+ R    + P YKRVDTCAAEF  +T 
Sbjct: 482  TGLNAEFLRQLKRKGFADARLAKLAGVREAEIRKLRDQYDLHPVYKRVDTCAAEFATDTA 541

Query: 627  YMYSSYDFECESAP-TQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNS 685
            YMYS+Y+ ECE+ P T ++K+++LGGGPNRIGQGIEFDYCC H S +L+  GYETIM+N 
Sbjct: 542  YMYSTYEEECEANPSTDREKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVNC 601

Query: 686  NPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEH 745
            NPETVSTDYDTSDRLYFEP+T+EDVL ++ +E+P+G+IVQ+GGQTPLKL+          
Sbjct: 602  NPETVSTDYDTSDRLYFEPVTLEDVLEIVRIEKPKGVIVQYGGQTPLKLA---------- 651

Query: 746  RLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEI 805
            R   A+G   V + GTSPD+ID AEDRERF   +  L ++QP      +   A+  AKEI
Sbjct: 652  RALEAAG---VPVIGTSPDAIDRAEDRERFQHAVDRLKLKQPANATVTAIEMAVEKAKEI 708

Query: 806  GYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALA 865
            GYP+VVRPSYVLGGRAMEIVY +  L  Y + AV V  + PVL+D +L DA+E+DVDA+ 
Sbjct: 709  GYPLVVRPSYVLGGRAMEIVYDEADLRRYFQTAVSVSNDVPVLLDHFLDDAVEVDVDAIC 768

Query: 866  DSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMN 925
            D    V+IGGIMEHIEQAGVHSGDSAC +P  T+S    D +     KLA  L V GLMN
Sbjct: 769  DG-EMVLIGGIMEHIEQAGVHSGDSACSLPAYTLSQEIQDVMRQQVQKLAFELQVRGLMN 827

Query: 926  CQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPK 985
             Q+A+  + +VYL+E NPRA+RTVPFVSKA G PLAK AA VM+GKSL + G TKEVIP 
Sbjct: 828  VQFAVKNN-EVYLIEVNPRAARTVPFVSKATGVPLAKVAARVMAGKSLAEQGVTKEVIPP 886

Query: 986  HVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVF 1045
            + SVKEAVLPF KF G D LLGPEMRSTGEVMG+  +F  AFAKAQ+ +   +   G   
Sbjct: 887  YYSVKEAVLPFNKFPGVDPLLGPEMRSTGEVMGVGRTFAEAFAKAQLGSNSTMKKHGRAL 946

Query: 1046 LSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVA 1105
            LS+ +  K  +  +A   L  GF++ +T GTA  L   GI    V K+HEGRPH  D + 
Sbjct: 947  LSVREGDKERVVDLAAKLLKQGFELDATHGTAIVLGEAGINPRLVNKVHEGRPHIQDRIK 1006

Query: 1106 NGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRS 1156
            NG+   ++ T+SG    + D   +RR  L YKV   TT++G  A A A+ +
Sbjct: 1007 NGEYTYIINTTSGRRAIE-DSRVIRRSALQYKVHYDTTLNGGFATAMALNA 1056


>gi|429084692|ref|ZP_19147692.1| Carbamoyl-phosphate synthase large chain [Cronobacter condimenti
            1330]
 gi|426546379|emb|CCJ73733.1| Carbamoyl-phosphate synthase large chain [Cronobacter condimenti
            1330]
          Length = 1074

 Score = 1225 bits (3170), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 614/1078 (56%), Positives = 784/1078 (72%), Gaps = 19/1078 (1%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILILGAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  E+V +++EKERPDA+LPTMGGQTALN A+ L   G L+++GV +IGA  DA
Sbjct: 63   ATYIEPIHWEVVRKIIEKERPDAVLPTMGGQTALNCALELERQGVLDEFGVTMIGATADA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  F  AMK IG+ T  SGI + +DE +++A ++G +P IIRP+FT+GGTGGGI
Sbjct: 123  IDKAEDRRRFDVAMKKIGLDTARSGIAHNMDEALAVAADVG-YPCIIRPSFTMGGTGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEFE IC  GL  S T ++L+++SL+GWKEYE+EV+RD  DN +I+CSIEN D MG
Sbjct: 182  AYNREEFEEICARGLDLSPTKELLIDESLIGWKEYEMEVVRDKNDNCIIVCSIENFDAMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            +HTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGVE GGSNVQFAVNP +G ++VIEMN
Sbjct: 242  IHTGDSITVAPAQTLTDKEYQIMRNASMAVLREIGVETGGSNVQFAVNPKNGRLIVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT  +TPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGYTLDELMNDITGGRTPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            F FEKF G+   LTTQMKSVGE MA+GRT QES QKALR LE G +G+      +     
Sbjct: 362  FNFEKFAGANDRLTTQMKSVGEVMAIGRTQQESMQKALRGLEVGATGFDPKVSLDDPEAL 421

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
             +++  L+    +R+  I  A + G+ VD +  L+ ID+WFL Q +EL+ +E+ +  Q +
Sbjct: 422  TKIRRELKDAGAERIWYIADAFRAGLSVDGVFNLTNIDRWFLVQIEELVRLEEQVAEQGI 481

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
            + +  D    +KR+GF+D ++A     +E E+R+ R    + P YKRVDTCAAEF  +T 
Sbjct: 482  NGLNADFLRMLKRKGFADARLAKLAGVSESEIRKLREQYNLHPVYKRVDTCAAEFATDTA 541

Query: 627  YMYSSYDFECESAPTQ-KKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNS 685
            YMYS+Y+ ECE+ P Q ++K+++LGGGPNRIGQGIEFDYCC H + +L+  GYETIM+N 
Sbjct: 542  YMYSTYEEECEANPNQDREKIMVLGGGPNRIGQGIEFDYCCVHAALALREDGYETIMVNC 601

Query: 686  NPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEH 745
            NPETVSTDYDTSDRLYFEP+T+EDVL ++ +E+P+G+IVQ+GGQTPLKL+          
Sbjct: 602  NPETVSTDYDTSDRLYFEPVTLEDVLEIVRIEKPKGVIVQYGGQTPLKLA---------- 651

Query: 746  RLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEI 805
            R   A+G   V + GTS D+ID AEDRERF   +  L ++QP      +   A+  AK+I
Sbjct: 652  RALEAAG---VPVIGTSRDAIDRAEDRERFQQAVDRLKLKQPANATVTAIEQAIEKAKDI 708

Query: 806  GYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALA 865
            GYP+VVRPSYVLGGRAMEIVY +  L  Y + AV V  + PVL+D++L DA+E+DVDA+ 
Sbjct: 709  GYPLVVRPSYVLGGRAMEIVYDEADLRRYFQTAVSVSNDAPVLLDRFLDDAVEVDVDAIC 768

Query: 866  DSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMN 925
            D    V+IGGIMEHIEQAGVHSGDSAC +P  T+S    D +     KLA  L V GLMN
Sbjct: 769  DG-EMVLIGGIMEHIEQAGVHSGDSACSLPAYTLSQEIQDVMRQQVQKLAFELQVRGLMN 827

Query: 926  CQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPK 985
             Q+A+  + +VYL+E NPRA+RTVPFVSKA G PLAK AA VM+GK+L++ G TKE+IP 
Sbjct: 828  VQFAVKDN-EVYLIEVNPRAARTVPFVSKATGVPLAKVAARVMAGKTLSEQGVTKEIIPP 886

Query: 986  HVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVF 1045
            + SVKE VLPF KF G D LLGPEMRSTGEVMG+  +F  AFAKAQ+ +   +   G   
Sbjct: 887  YYSVKEVVLPFNKFPGVDPLLGPEMRSTGEVMGVGRTFAEAFAKAQLGSNSTMKKQGRAL 946

Query: 1046 LSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVA 1105
            LS+ +  K  +  +A   L  GF++ +T GTA  L   GI    V K+HEGRPH  D + 
Sbjct: 947  LSVREGDKERVVDLAAKLLKFGFELDATHGTAIVLGEAGINPRLVNKVHEGRPHIQDRIK 1006

Query: 1106 NGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTVT 1163
            NG+   ++ T++G    + D   +RR  L YKV   TT++G  A A A+ +  +  VT
Sbjct: 1007 NGEYTYIINTTAGRQAIE-DSKLIRRSALQYKVHYDTTLNGGFATAMALNADATEKVT 1063


>gi|388600448|ref|ZP_10158844.1| carbamoyl phosphate synthase large subunit [Vibrio campbellii DS40M4]
          Length = 1077

 Score = 1225 bits (3169), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 615/1079 (56%), Positives = 782/1079 (72%), Gaps = 22/1079 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILILGAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIQSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPDMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  E+V  ++ KE+PDA+LPTMGGQTALN A+ L + G LE++GVE+IGA  DA
Sbjct: 63   ATYIEPIQWEVVRNIIAKEKPDAVLPTMGGQTALNCALDLEKHGVLEEFGVEMIGATADA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  F +AMK+IG++ P +    T++E  ++ + +G FP IIRP+FT+GGTGGGI
Sbjct: 123  IDKAEDRSRFDKAMKSIGLECPRADTAKTMEEAYAVLDMVG-FPCIIRPSFTMGGTGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYNKEEFE IC+ GL  S T+++L+++SL+GWKEYE+EV+RD ADN +I+C+IEN DPMG
Sbjct: 182  AYNKEEFEEICRRGLDLSPTNELLIDESLIGWKEYEMEVVRDKADNCIIVCAIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            +HTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGVE GGSNVQF +NP DG +++IEMN
Sbjct: 242  IHTGDSITVAPAQTLTDKEYQLMRNASLAVLREIGVETGGSNVQFGINPKDGRMVIIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VG++LD++ NDIT   TPASFEP+IDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKIAAKLAVGFTLDELMNDITGGATPASFEPTIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWD- 505
            F FEKF G+   LTTQMKSVGE MA+GR  QES QKALR LE G +G+    + +LD   
Sbjct: 362  FNFEKFAGANDRLTTQMKSVGEVMAIGRNQQESLQKALRGLEVGATGF--DEMVDLDAPD 419

Query: 506  -WEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQ 564
               ++++ L+    +R+  +  A + GM VD +  L+ ID+WFL Q ++++ +EQ L  +
Sbjct: 420  ALTKIRHELKEAGAERIWFVADAFRAGMSVDGVFNLTQIDRWFLVQIEDIVKLEQELKAK 479

Query: 565  SVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEAN 624
              + + KD+  ++KR+GF+D +++      E E+R  R    + P YKRVDTCAAEF ++
Sbjct: 480  GFAGLNKDELNKLKRKGFADARLSKILGVAESEIRRLRDQYDIHPVYKRVDTCAAEFSSD 539

Query: 625  TPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMN 684
            T YMYSSYD ECE+ PT K K++ILGGGPNRIGQGIEFDYCC H S +L+  GYETIM+N
Sbjct: 540  TAYMYSSYDDECEANPTDKDKIMILGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVN 599

Query: 685  SNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDE 744
             NPETVSTDYDTSDRLYFEP+T+EDVL +  +E+P+G+IVQ+GGQTPLKL+         
Sbjct: 600  CNPETVSTDYDTSDRLYFEPVTLEDVLAIARVEKPKGVIVQYGGQTPLKLA--------- 650

Query: 745  HRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKE 804
             R   A+G   V I GTSPD+ID AEDRERF   +  L + QP+     +   A+  ++E
Sbjct: 651  -RALEAAG---VPIIGTSPDAIDRAEDRERFQVAVDRLGLLQPENATVTTMEQAVEKSRE 706

Query: 805  IGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDAL 864
            IGYP+VVRPSYVLGGRAMEIVY ++ L  Y   AV V  E PVL+D +L DA+E+D+DA+
Sbjct: 707  IGYPLVVRPSYVLGGRAMEIVYDEQDLRRYFNEAVSVSNESPVLLDSFLDDAVEVDIDAI 766

Query: 865  ADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLM 924
             D    VVIGGIMEHIEQAGVHSGDSAC +P  T+S    D +     KLA  L V GLM
Sbjct: 767  CDG-ERVVIGGIMEHIEQAGVHSGDSACSLPAYTLSQEIQDVMREQVEKLAFELGVRGLM 825

Query: 925  NCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIP 984
            N Q+A+  +  VYL+E NPRA+RTVPFVSKA G P+AK AA VM+G+SL   GFTKE+IP
Sbjct: 826  NTQFAVKNN-QVYLIEVNPRAARTVPFVSKATGAPIAKIAARVMAGQSLEAQGFTKEIIP 884

Query: 985  KHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTV 1044
             + SVKE VLPF KF G D LLGPEMRSTGEVMG+  +F  A+AKA++  G   P  G  
Sbjct: 885  PYYSVKEVVLPFNKFPGVDPLLGPEMRSTGEVMGVGATFAEAYAKAELGCGNIYPEGGRA 944

Query: 1045 FLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMV 1104
             LS+    K  +  +A     +G+++ +T GTA  L   GI    V K+HEGRPH  D +
Sbjct: 945  LLSVRAGDKERVVDLASKLTKLGYQLDATHGTAVILGEAGINPRLVNKVHEGRPHILDRI 1004

Query: 1105 ANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTVT 1163
             N +   +V T++G    + D   LRR  LA KV   TT++ A A   A  +   +TVT
Sbjct: 1005 KNNEYTYIVNTAAGRQAIE-DSKVLRRGALAEKVNYTTTLNAAFATCMAHTADAKSTVT 1062



 Score =  250 bits (639), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 170/483 (35%), Positives = 263/483 (54%), Gaps = 37/483 (7%)

Query: 67  KIDS-SAELSNGAA----SSKDQKLGKRTDLRKILILGAGPIVIGQACEFDYSGTQACKA 121
           ++D+ +AE S+  A    S  D+     TD  KI+ILG GP  IGQ  EFDY    A  A
Sbjct: 528 RVDTCAAEFSSDTAYMYSSYDDECEANPTDKDKIMILGGGPNRIGQGIEFDYCCVHASLA 587

Query: 122 LKEEGYEVILINSNPATIMTDPGLADRTYITPMTPELVEQVLEKERPDALLPTMGGQTAL 181
           L+E+GYE I++N NP T+ TD   +DR Y  P+T E V  +   E+P  ++   GGQT L
Sbjct: 588 LREDGYETIMVNCNPETVSTDYDTSDRLYFEPVTLEDVLAIARVEKPKGVIVQYGGQTPL 647

Query: 182 NLAVALAESGALEKYGVELIGAKLDAIKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECI 241
            LA       ALE  GV +IG   DAI +AEDR+ F+ A+  +G+  P +    T+++ +
Sbjct: 648 KLA------RALEAAGVPIIGTSPDAIDRAEDRERFQVAVDRLGLLQPENATVTTMEQAV 701

Query: 242 SIANEIGEFPLIIRPAFTLGGTGGGIAYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKE 301
             + EIG +PL++RP++ LGG    I Y++++        ++ S  S VL++  L    E
Sbjct: 702 EKSREIG-YPLVVRPSYVLGGRAMEIVYDEQDLRRYFNEAVSVSNESPVLLDSFLDDAVE 760

Query: 302 YELEVMRDLADNVVIICSIENVDPMGVHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREI 361
            +++ + D  + VVI   +E+++  GVH+GDS    PA TL+ +    +R+    +  E+
Sbjct: 761 VDIDAICD-GERVVIGGIMEHIEQAGVHSGDSACSLPAYTLSQEIQDVMREQVEKLAFEL 819

Query: 362 GVECGGSNVQFAVNPVDGEVMVIEMNPRVSRSSALASKATGFPIAKMAAKLSVGYSLDQI 421
           GV  G  N QFAV   + +V +IE+NPR +R+    SKATG PIAK+AA++  G SL+  
Sbjct: 820 GVR-GLMNTQFAVK--NNQVYLIEVNPRAARTVPFVSKATGAPIAKIAARVMAGQSLE-- 874

Query: 422 PNDITKKTPASFEPSIDYVVTKIPRFAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQ 481
               TK+    +     Y V ++    F KFPG +PLL  +M+S GE M +G TF E++ 
Sbjct: 875 AQGFTKEIIPPY-----YSVKEVV-LPFNKFPGVDPLLGPEMRSTGEVMGVGATFAEAYA 928

Query: 482 KALRSLECGFSGWGCSNVKELDWDWEQLKYSLRVPNPDRMQAIYAAMKK-GMKVDEIHEL 540
           KA           GC N+     +  +   S+R  + +R+  + + + K G ++D  H  
Sbjct: 929 KA---------ELGCGNIYP---EGGRALLSVRAGDKERVVDLASKLTKLGYQLDATHGT 976

Query: 541 SFI 543
           + I
Sbjct: 977 AVI 979


>gi|417131882|ref|ZP_11976667.1| carbamoyl-phosphate synthase, large subunit [Escherichia coli 5.0588]
 gi|417225159|ref|ZP_12028450.1| carbamoyl-phosphate synthase, large subunit [Escherichia coli 96.154]
 gi|423709759|ref|ZP_17684113.1| carbamoyl-phosphate synthase large chain [Escherichia coli B799]
 gi|385705207|gb|EIG42273.1| carbamoyl-phosphate synthase large chain [Escherichia coli B799]
 gi|386149736|gb|EIH01025.1| carbamoyl-phosphate synthase, large subunit [Escherichia coli 5.0588]
 gi|386200207|gb|EIH99198.1| carbamoyl-phosphate synthase, large subunit [Escherichia coli 96.154]
          Length = 1073

 Score = 1225 bits (3169), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 617/1071 (57%), Positives = 782/1071 (73%), Gaps = 19/1071 (1%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILILGAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  E+V +++EKERPDA+LPTMGGQTALN A+ L   G LE++GV +IGA  DA
Sbjct: 63   ATYIEPIHWEVVRKIIEKERPDAVLPTMGGQTALNCALELERQGVLEEFGVTMIGATADA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  F  AMK IG++T  SGI +T++E +++A ++G FP IIRP+FT+GG+GGGI
Sbjct: 123  IDKAEDRRRFDVAMKKIGLETARSGIAHTMEEALAVAADVG-FPCIIRPSFTMGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEFE IC  GL  S T ++L+++SL+GWKEYE+EV+RD  DN +I+CSIEN D MG
Sbjct: 182  AYNREEFEEICARGLDLSPTKELLIDESLIGWKEYEMEVVRDKNDNCIIVCSIENFDAMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            +HTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGVE GGSNVQFAVNP +G ++VIEMN
Sbjct: 242  IHTGDSITVAPAQTLTDKEYQIMRNASMAVLREIGVETGGSNVQFAVNPKNGRLIVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT  +TPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGYTLDELMNDITGGRTPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            F FEKF G+   LTTQMKSVGE MA+GRT QES QKALR LE G +G+      +     
Sbjct: 362  FNFEKFAGANDRLTTQMKSVGEVMAIGRTQQESLQKALRGLEVGATGFDPKVSLDDPEAL 421

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
             +++  L+    +R+  I  A + G+ VD +  L+ ID+WFL Q +EL+ +E+ +    +
Sbjct: 422  TKIRRELKDAGAERIWYIADAFRAGLSVDGVFNLTNIDRWFLVQIEELVRLEEKVAEVGI 481

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
            + +  +   ++KR+GF+D ++A      E E+R+ R    + P YKRVDTCAAEF  +T 
Sbjct: 482  TGLNAEFLRQLKRKGFADARLAKLAGVREAEIRKLRDQYDLHPVYKRVDTCAAEFATDTA 541

Query: 627  YMYSSYDFECESAP-TQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNS 685
            YMYS+Y+ ECE+ P T ++K+++LGGGPNRIGQGIEFDYCC H S +L+  GYETIM+N 
Sbjct: 542  YMYSTYEEECEANPSTDREKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVNC 601

Query: 686  NPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEH 745
            NPETVSTDYDTSDRLYFEP+T+EDVL ++ +E+P+G+IVQ+GGQTPLKL+          
Sbjct: 602  NPETVSTDYDTSDRLYFEPVTLEDVLEIVRIEKPKGVIVQYGGQTPLKLA---------- 651

Query: 746  RLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEI 805
            R   A+G   V + GTSPD+ID AEDRERF   ++ L ++QP      +   A+  AKEI
Sbjct: 652  RALEAAG---VPVIGTSPDAIDRAEDRERFQHAVERLKLKQPANATVTAIEMAVEKAKEI 708

Query: 806  GYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALA 865
            GYP+VVRPSYVLGGRAMEIVY +  L  Y + AV V  + PVL+D +L DA+E+DVDA+ 
Sbjct: 709  GYPLVVRPSYVLGGRAMEIVYDEADLRRYFQTAVSVSNDAPVLLDHFLDDAVEVDVDAIC 768

Query: 866  DSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMN 925
            D    V+IGGIMEHIEQAGVHSGDSAC +P  T+S    D +     KLA  L V GLMN
Sbjct: 769  DG-EMVLIGGIMEHIEQAGVHSGDSACSLPAYTLSQEIQDVMRQQVQKLAFELQVRGLMN 827

Query: 926  CQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPK 985
             Q+A+  + +VYL+E NPRA+RTVPFVSKA G PLAK AA VM+GKSL + G TKEVIP 
Sbjct: 828  VQFAVKNN-EVYLIEVNPRAARTVPFVSKATGVPLAKVAARVMAGKSLAEQGVTKEVIPP 886

Query: 986  HVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVF 1045
            + SVKE VLPF KF G D LLGPEMRSTGEVMG+  +F  AFAKAQ+ +   +   G   
Sbjct: 887  YYSVKEVVLPFNKFPGVDPLLGPEMRSTGEVMGVGRTFAEAFAKAQLGSNSTMKKHGRAL 946

Query: 1046 LSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVA 1105
            LS+ +  K  +  +A   L  GF++ +T GTA  L   GI    V K+HEGRPH  D + 
Sbjct: 947  LSVREGDKERVVDLAAKLLKQGFELDATHGTAIVLGEAGINPRLVNKVHEGRPHIQDRIK 1006

Query: 1106 NGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRS 1156
            NG+   ++ T+SG    + D   +RR  L YKV   TT++G  A A A+ +
Sbjct: 1007 NGEYTYIINTTSGRRAIE-DSRVIRRSALQYKVHYDTTLNGGFATAMALNA 1056


>gi|83594218|ref|YP_427970.1| carbamoyl phosphate synthase large subunit [Rhodospirillum rubrum
            ATCC 11170]
 gi|386350970|ref|YP_006049218.1| carbamoyl phosphate synthase large subunit [Rhodospirillum rubrum
            F11]
 gi|83577132|gb|ABC23683.1| carbamoyl-phosphate synthase large subunit [Rhodospirillum rubrum
            ATCC 11170]
 gi|346719406|gb|AEO49421.1| carbamoyl phosphate synthase large subunit [Rhodospirillum rubrum
            F11]
          Length = 1082

 Score = 1225 bits (3169), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 622/1101 (56%), Positives = 794/1101 (72%), Gaps = 37/1101 (3%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILI+GAGPIVIGQACEFDYSG QACKAL+ EGY VIL+NSNPATIMTDP  AD
Sbjct: 3    KRTDIKSILIIGAGPIVIGQACEFDYSGAQACKALRAEGYRVILVNSNPATIMTDPETAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+TPE+VE ++E+ERPDALLPTMGGQTALN A+ALA+ G L KYGVE+I A  + 
Sbjct: 63   ATYIEPITPEIVEAIIERERPDALLPTMGGQTALNTAMALADRGVLTKYGVEMIAANKEV 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR LF+ AM+ IG+  P S + ++++E      EIG  P+IIRP+FTLGG GGG+
Sbjct: 123  IAKAEDRLLFRDAMRKIGLDCPRSALVHSIEESRQALEEIG-LPVIIRPSFTLGGQGGGM 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            A+N+EE++ I  +GLAAS   Q+LVE+S+LGWKEYE+EV+RD ADN +I+CSIEN+DPMG
Sbjct: 182  AFNREEYDRIVASGLAASPVRQILVEESVLGWKEYEMEVVRDRADNCIIVCSIENIDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPA TLTDKEYQ +R+ SIA +REIGVE GGSNVQFAVNP DG ++VIEMN
Sbjct: 242  VHTGDSITVAPALTLTDKEYQVMRNASIACLREIGVETGGSNVQFAVNPKDGRLVVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRF 447
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT  TPASFEP+IDYVVTK+PRF
Sbjct: 302  PRVSRSSALASKATGFPIAKIAAKLAVGYTLDELSNDITGVTPASFEPTIDYVVTKLPRF 361

Query: 448  AFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDWE 507
             FEKFP +E LL++ MKSVGEAMA+GRTF+ES QK LRSLE G  G    +  E+     
Sbjct: 362  TFEKFPDTEALLSSSMKSVGEAMAIGRTFKESLQKGLRSLEIGLDGL---DEVEIPGSAG 418

Query: 508  Q-----LKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLL 562
            Q     ++ +L    PDR+  I  A+++G  V+E+  + + D WFL Q KE++D E+ L 
Sbjct: 419  QDGKDAIRAALSKARPDRILIIAQALRQGFTVEEVRAICYYDPWFLEQIKEIVDEERRLR 478

Query: 563  TQSVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFE 622
               +        + VK+ GFSD ++A  T  T  EV  +R  L V P YKR+DTCAAEF 
Sbjct: 479  ENGLPG-DAVSLHRVKKMGFSDARLAKLTGKTVTEVSFRRQVLNVHPVYKRIDTCAAEFA 537

Query: 623  ANTPYMYSSYD------FECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSA 676
            + TPYMYS Y+       ECE+  + + K++ILGGGPNRIGQGIEFDYCC H +++L  A
Sbjct: 538  SRTPYMYSCYEGDGLTPAECEAEVSDRTKIIILGGGPNRIGQGIEFDYCCVHAAYALSDA 597

Query: 677  GYETIMMNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGI----IVQFGGQTPL 732
            G+ETIM+N NPETVSTDYDTSDRLYFEPLT+EDV+ +   E+  G     IVQ+GGQTPL
Sbjct: 598  GFETIMVNCNPETVSTDYDTSDRLYFEPLTIEDVVELARKEQARGTLLGCIVQYGGQTPL 657

Query: 733  KLSLPIHQYLDEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIA 792
            KL+          R   A+G   + + GTSPD+ID AEDR+RF  +I +L++ QP+ G A
Sbjct: 658  KLA----------RGLEAAG---IPVLGTSPDAIDLAEDRDRFQKLIAKLALRQPRNGTA 704

Query: 793  KSEADALAIAKEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKY 852
             S   A AIA  +GYPVV+RPSYVLGGRAM+IV+ +  L  Y+ NAV+V  + PVLID Y
Sbjct: 705  LSVEQARAIATRVGYPVVIRPSYVLGGRAMQIVHDEAQLNDYMVNAVKVSGDDPVLIDNY 764

Query: 853  LSDAIEIDVDALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTI 912
            LS AIE+DVDA+AD      I GIM+HIE+AG+HSGDSAC +P  ++  + +  ++  T 
Sbjct: 765  LSGAIEVDVDAIADG-ETTHIAGIMQHIEEAGIHSGDSACSLPPYSLDEATIAELTKQTE 823

Query: 913  KLAKRLNVCGLMNCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKS 972
             LAK LNV GLMN Q+AI   GD+Y+LE NPRASRTVPFV+KA G  +AK AA VM+G+S
Sbjct: 824  ALAKGLNVRGLMNIQFAI-KDGDIYILEVNPRASRTVPFVAKATGVAVAKIAARVMAGES 882

Query: 973  LNDLGFTKEVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQI 1032
            L   G   + +  HV+VKEAV PF +F G D++LGPEM+STGEVMGID +F  AFAK+Q+
Sbjct: 883  LASFGLVTKRL-AHVAVKEAVFPFARFPGVDIVLGPEMKSTGEVMGIDTTFARAFAKSQL 941

Query: 1033 AAGQKLPLSGTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLK 1092
             AG  LP  GT F+S+ D  K  +  IA+   ++GF++V+T GTA  L   G++VE + K
Sbjct: 942  GAGVTLPEGGTAFISVRDGDKAAIMPIARELTELGFRLVATRGTAALLAENGLSVEVINK 1001

Query: 1093 MHEGRPHAGDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAE 1152
            + EGRPH  D + +G I ++  T+ G    Q D   +R   L   +P  TTV+GA A  +
Sbjct: 1002 VLEGRPHCVDAMISGDIHLVFNTTEGIQ-SQKDSFDIRHTALMRNIPHYTTVAGATAAVK 1060

Query: 1153 AIRSLKSNTVTMTALQDFFDV 1173
            A+ +L+   + +  LQ++F V
Sbjct: 1061 AMTALRQGHLEVAPLQEYFKV 1081


>gi|444424596|ref|ZP_21220051.1| carbamoyl phosphate synthase large subunit [Vibrio campbellii CAIM
            519 = NBRC 15631]
 gi|444242088|gb|ELU53604.1| carbamoyl phosphate synthase large subunit [Vibrio campbellii CAIM
            519 = NBRC 15631]
          Length = 1077

 Score = 1225 bits (3169), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 615/1079 (56%), Positives = 782/1079 (72%), Gaps = 22/1079 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILILGAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIQSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPDMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  E+V  ++ KE+PDA+LPTMGGQTALN A+ L + G LE++GVE+IGA  DA
Sbjct: 63   ATYIEPIQWEVVRNIIAKEKPDAVLPTMGGQTALNCALDLEKHGVLEEFGVEMIGATADA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  F +AMK+IG++ P +    T++E  ++ + +G FP IIRP+FT+GGTGGGI
Sbjct: 123  IDKAEDRSRFDKAMKSIGLECPRADTAKTMEEAYAVLDMVG-FPCIIRPSFTMGGTGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYNKEEFE IC+ GL  S T+++L+++SL+GWKEYE+EV+RD ADN +I+C+IEN DPMG
Sbjct: 182  AYNKEEFEEICRRGLDLSPTNELLIDESLIGWKEYEMEVVRDKADNCIIVCAIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            +HTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGVE GGSNVQF +NP DG +++IEMN
Sbjct: 242  IHTGDSITVAPAQTLTDKEYQLMRNASLAVLREIGVETGGSNVQFGINPKDGRMVIIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VG++LD++ NDIT   TPASFEP+IDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKIAAKLAVGFTLDELMNDITGGATPASFEPTIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWD- 505
            F FEKF G+   LTTQMKSVGE MA+GR  QES QKALR LE G +G+    + +LD   
Sbjct: 362  FNFEKFAGANDRLTTQMKSVGEVMAIGRNQQESLQKALRGLEVGATGF--DEMVDLDAPD 419

Query: 506  -WEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQ 564
               ++++ L+    +R+  +  A + GM VD +  L+ ID+WFL Q ++++ +EQ L  +
Sbjct: 420  ALTKIRHELKEAGAERIWYVADAFRAGMSVDGVFNLTQIDRWFLVQIEDIVKLEQELKAK 479

Query: 565  SVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEAN 624
              + + KD+  ++KR+GF+D +++      E E+R  R    + P YKRVDTCAAEF ++
Sbjct: 480  GFAGLNKDELNKLKRKGFADARLSKILGVAESEIRRLRDQYDIHPVYKRVDTCAAEFSSD 539

Query: 625  TPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMN 684
            T YMYSSYD ECE+ PT K K++ILGGGPNRIGQGIEFDYCC H S +L+  GYETIM+N
Sbjct: 540  TAYMYSSYDDECEANPTDKDKIMILGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVN 599

Query: 685  SNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDE 744
             NPETVSTDYDTSDRLYFEP+T+EDVL +  +E+P+G+IVQ+GGQTPLKL+         
Sbjct: 600  CNPETVSTDYDTSDRLYFEPVTLEDVLAIARVEKPKGVIVQYGGQTPLKLA--------- 650

Query: 745  HRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKE 804
             R   A+G   V I GTSPD+ID AEDRERF   +  L + QP+     +   A+  ++E
Sbjct: 651  -RALEAAG---VPIIGTSPDAIDRAEDRERFQVAVDRLGLLQPENATVTTMEQAVEKSRE 706

Query: 805  IGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDAL 864
            IGYP+VVRPSYVLGGRAMEIVY ++ L  Y   AV V  E PVL+D +L DA+E+D+DA+
Sbjct: 707  IGYPLVVRPSYVLGGRAMEIVYDEQDLRRYFNEAVSVSNESPVLLDSFLDDAVEVDIDAI 766

Query: 865  ADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLM 924
             D    VVIGGIMEHIEQAGVHSGDSAC +P  T+S    D +     KLA  L V GLM
Sbjct: 767  CDG-ERVVIGGIMEHIEQAGVHSGDSACSLPAYTLSQEIQDVMREQVEKLAFELGVRGLM 825

Query: 925  NCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIP 984
            N Q+A+  +  VYL+E NPRA+RTVPFVSKA G P+AK AA VM+G+SL   GFTKE+IP
Sbjct: 826  NTQFAVKNN-QVYLIEVNPRAARTVPFVSKATGAPIAKIAARVMAGQSLEAQGFTKEIIP 884

Query: 985  KHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTV 1044
             + SVKE VLPF KF G D LLGPEMRSTGEVMG+  +F  A+AKA++  G   P  G  
Sbjct: 885  PYYSVKEVVLPFNKFPGVDPLLGPEMRSTGEVMGVGATFAEAYAKAELGCGNIYPEGGRA 944

Query: 1045 FLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMV 1104
             LS+    K  +  +A     +G+++ +T GTA  L   GI    V K+HEGRPH  D +
Sbjct: 945  LLSVRAGDKERVVDLASKLTKLGYQLDATHGTAVILGEAGINPRLVNKVHEGRPHILDRI 1004

Query: 1105 ANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTVT 1163
             N +   +V T++G    + D   LRR  LA KV   TT++ A A   A  +   +TVT
Sbjct: 1005 KNNEYTYIVNTAAGRQAIE-DSKVLRRGALAEKVNYTTTLNAAFATCMAHTADAKSTVT 1062



 Score =  250 bits (639), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 170/483 (35%), Positives = 263/483 (54%), Gaps = 37/483 (7%)

Query: 67  KIDS-SAELSNGAA----SSKDQKLGKRTDLRKILILGAGPIVIGQACEFDYSGTQACKA 121
           ++D+ +AE S+  A    S  D+     TD  KI+ILG GP  IGQ  EFDY    A  A
Sbjct: 528 RVDTCAAEFSSDTAYMYSSYDDECEANPTDKDKIMILGGGPNRIGQGIEFDYCCVHASLA 587

Query: 122 LKEEGYEVILINSNPATIMTDPGLADRTYITPMTPELVEQVLEKERPDALLPTMGGQTAL 181
           L+E+GYE I++N NP T+ TD   +DR Y  P+T E V  +   E+P  ++   GGQT L
Sbjct: 588 LREDGYETIMVNCNPETVSTDYDTSDRLYFEPVTLEDVLAIARVEKPKGVIVQYGGQTPL 647

Query: 182 NLAVALAESGALEKYGVELIGAKLDAIKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECI 241
            LA       ALE  GV +IG   DAI +AEDR+ F+ A+  +G+  P +    T+++ +
Sbjct: 648 KLA------RALEAAGVPIIGTSPDAIDRAEDRERFQVAVDRLGLLQPENATVTTMEQAV 701

Query: 242 SIANEIGEFPLIIRPAFTLGGTGGGIAYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKE 301
             + EIG +PL++RP++ LGG    I Y++++        ++ S  S VL++  L    E
Sbjct: 702 EKSREIG-YPLVVRPSYVLGGRAMEIVYDEQDLRRYFNEAVSVSNESPVLLDSFLDDAVE 760

Query: 302 YELEVMRDLADNVVIICSIENVDPMGVHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREI 361
            +++ + D  + VVI   +E+++  GVH+GDS    PA TL+ +    +R+    +  E+
Sbjct: 761 VDIDAICD-GERVVIGGIMEHIEQAGVHSGDSACSLPAYTLSQEIQDVMREQVEKLAFEL 819

Query: 362 GVECGGSNVQFAVNPVDGEVMVIEMNPRVSRSSALASKATGFPIAKMAAKLSVGYSLDQI 421
           GV  G  N QFAV   + +V +IE+NPR +R+    SKATG PIAK+AA++  G SL+  
Sbjct: 820 GVR-GLMNTQFAVK--NNQVYLIEVNPRAARTVPFVSKATGAPIAKIAARVMAGQSLE-- 874

Query: 422 PNDITKKTPASFEPSIDYVVTKIPRFAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQ 481
               TK+    +     Y V ++    F KFPG +PLL  +M+S GE M +G TF E++ 
Sbjct: 875 AQGFTKEIIPPY-----YSVKEVV-LPFNKFPGVDPLLGPEMRSTGEVMGVGATFAEAYA 928

Query: 482 KALRSLECGFSGWGCSNVKELDWDWEQLKYSLRVPNPDRMQAIYAAMKK-GMKVDEIHEL 540
           KA           GC N+     +  +   S+R  + +R+  + + + K G ++D  H  
Sbjct: 929 KA---------ELGCGNIYP---EGGRALLSVRAGDKERVVDLASKLTKLGYQLDATHGT 976

Query: 541 SFI 543
           + I
Sbjct: 977 AVI 979


>gi|212709135|ref|ZP_03317263.1| hypothetical protein PROVALCAL_00168 [Providencia alcalifaciens DSM
            30120]
 gi|422019700|ref|ZP_16366243.1| carbamoyl phosphate synthase large subunit [Providencia alcalifaciens
            Dmel2]
 gi|212688047|gb|EEB47575.1| hypothetical protein PROVALCAL_00168 [Providencia alcalifaciens DSM
            30120]
 gi|414102806|gb|EKT64396.1| carbamoyl phosphate synthase large subunit [Providencia alcalifaciens
            Dmel2]
          Length = 1073

 Score = 1225 bits (3169), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 617/1068 (57%), Positives = 779/1068 (72%), Gaps = 19/1068 (1%)

Query: 86   LGKRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGL 145
            + KRTD++ ILILGAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +
Sbjct: 1    MAKRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEM 60

Query: 146  ADRTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKL 205
            AD TYI P+  E+V +++EKERPDA+LPTMGGQTALN A+ L   G L ++GV +IGA  
Sbjct: 61   ADATYIEPIHWEVVRKIIEKERPDAVLPTMGGQTALNCALELERQGVLAEFGVTMIGATA 120

Query: 206  DAIKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGG 265
            DAI KAEDR  F +AMK IG+ T  SGI +T++E  ++A+++G FP IIRP+FT+GG+GG
Sbjct: 121  DAIDKAEDRQRFDKAMKKIGLGTARSGIAHTMEEANAVADDVG-FPCIIRPSFTMGGSGG 179

Query: 266  GIAYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDP 325
            GIAYN+EEFE IC  GL  S T+++L+++SL+GWKEYE+EV+RD  DN +I+CSIEN D 
Sbjct: 180  GIAYNREEFEEICTRGLDLSPTNELLIDESLIGWKEYEMEVVRDKKDNCIIVCSIENFDA 239

Query: 326  MGVHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIE 385
            MG+HTGDSITVAPAQTLTDKEYQ +RD S+A++REIGVE GGSNVQFAVNP DG ++VIE
Sbjct: 240  MGIHTGDSITVAPAQTLTDKEYQIMRDASMAVLREIGVETGGSNVQFAVNPKDGRLIVIE 299

Query: 386  MNPRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKI 444
            MNPRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT  +TPASFEPSIDYVVTKI
Sbjct: 300  MNPRVSRSSALASKATGFPIAKIAAKLAVGYTLDELMNDITGGRTPASFEPSIDYVVTKI 359

Query: 445  PRFAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDW 504
            PRF FEKF GS   LTTQMKSVGE MA+GRTFQES QKALR LE G +G+     ++   
Sbjct: 360  PRFNFEKFAGSNDRLTTQMKSVGEVMAIGRTFQESMQKALRGLEVGATGFDPKVSQDDPE 419

Query: 505  DWEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQ 564
               +++  L+    DR+  I  A + G+ +D I  L+ ID+WFL Q +EL+ +E  +   
Sbjct: 420  SLTRIRRELKDAGSDRIWYIADAFRAGLSIDGIFNLTNIDRWFLVQIEELVRLENEVAEL 479

Query: 565  SVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEAN 624
             ++ +TKD    +KR+GF+D ++A     +E E+R+ R    + P YKRVDTCAAEF  +
Sbjct: 480  GINGLTKDFLRHLKRKGFADARLASLVGVSEAELRKLRQGYDLHPVYKRVDTCAAEFATD 539

Query: 625  TPYMYSSYDFECESAP-TQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMM 683
            T YMYS+Y+ ECES P + K K+++LGGGPNRIGQGIEFDYCC H S +L+  GYETIM+
Sbjct: 540  TAYMYSTYEDECESNPNSDKPKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMV 599

Query: 684  NSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLD 743
            N NPETVSTDYDTSDRLYFEP+T+EDVL ++ +E+P+G+IVQ+GGQTPLKL+        
Sbjct: 600  NCNPETVSTDYDTSDRLYFEPVTLEDVLEIVRIEQPKGVIVQYGGQTPLKLA-------- 651

Query: 744  EHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAK 803
              R   A+G   V + GTSPD+ID AEDRERF   +  L+++QP+     +   A+  A 
Sbjct: 652  --RALEAAG---VPVIGTSPDAIDRAEDRERFQQAVNRLNLKQPQNATVATIEQAVEKAA 706

Query: 804  EIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDA 863
             IGYP+VVRPSYVLGGRAMEIVY +  L  Y + AV V  + PVL+D++L DAIE+DVDA
Sbjct: 707  GIGYPLVVRPSYVLGGRAMEIVYDEIDLRRYFQTAVSVSNDAPVLLDRFLDDAIEVDVDA 766

Query: 864  LADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGL 923
            + D    V+IGGIMEHIEQAGVHSGDSAC +P  T+S    D +      LA  L V GL
Sbjct: 767  ICDG-EMVLIGGIMEHIEQAGVHSGDSACSLPAYTLSQEIQDVMREQVRSLAFELRVRGL 825

Query: 924  MNCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVI 983
            MN Q+A+  + +VYL+E NPRA+RTVPFVSKA G  LAK AA VM+G++L   G T+EVI
Sbjct: 826  MNVQFAVKNN-EVYLIEVNPRAARTVPFVSKATGVQLAKVAARVMAGQTLTQQGVTQEVI 884

Query: 984  PKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGT 1043
            P + SVKE VLPF KFQG D +LGPEMRSTGEVMG+  +F  AFAKA + +   +  SG 
Sbjct: 885  PPYYSVKEVVLPFNKFQGVDPILGPEMRSTGEVMGVGRTFAEAFAKAMLGSNSTMKKSGR 944

Query: 1044 VFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDM 1103
              LS+ +  K  +  +A   L  GF++ +T GTA  L   GI    V K+HEGRPH  D 
Sbjct: 945  ALLSVREGDKTRVVDLAAKLLKHGFELDATHGTAIVLGEAGINPRLVNKVHEGRPHIQDR 1004

Query: 1104 VANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANA 1151
            + NG+   +V T++G    + D   +R   L YKV   TT++G  A A
Sbjct: 1005 IKNGEYNYIVNTTAGRQAIE-DSKLIRGSALRYKVHYDTTLNGGFATA 1051


>gi|167836214|ref|ZP_02463097.1| carbamoyl phosphate synthase large subunit [Burkholderia
            thailandensis MSMB43]
 gi|424903993|ref|ZP_18327503.1| carbamoyl phosphate synthase large subunit [Burkholderia
            thailandensis MSMB43]
 gi|390929971|gb|EIP87373.1| carbamoyl phosphate synthase large subunit [Burkholderia
            thailandensis MSMB43]
          Length = 1084

 Score = 1225 bits (3169), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 631/1086 (58%), Positives = 799/1086 (73%), Gaps = 34/1086 (3%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD+  ILI+GAGPI+IGQACEFDYSG QACKAL+EEGY+VIL+NSNPATIMTDP  AD
Sbjct: 3    KRTDINSILIIGAGPIIIGQACEFDYSGAQACKALREEGYKVILVNSNPATIMTDPNTAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+T E+VE+++ KERPDA+LPTMGGQTALN A+ L   G L+KYGVELIGA  +A
Sbjct: 63   VTYIEPITWEVVERIIAKERPDAILPTMGGQTALNCALDLFHHGVLDKYGVELIGASPEA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEI------GEFPLIIRPAFTLG 261
            I KAEDR  FK AM  IG+ +  SGI ++++E   +  EI        +P++IRP+FTLG
Sbjct: 123  IDKAEDRQKFKDAMTKIGLGSAKSGIAHSMEEANKVHGEIMAATGGSGYPVVIRPSFTLG 182

Query: 262  GTGGGIAYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIE 321
            G+GGGIAYN+EEFE ICK GL  S T ++L+E+SLLGWKEYE+EV+RD ADN +IICSIE
Sbjct: 183  GSGGGIAYNREEFEEICKRGLDLSPTRELLIEESLLGWKEYEMEVVRDRADNCIIICSIE 242

Query: 322  NVDPMGVHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEV 381
            N+DPMGVHTGDSITVAPAQTLTDKEYQ LR+ S+A++REIGV+ GGSNVQF++NP DG +
Sbjct: 243  NLDPMGVHTGDSITVAPAQTLTDKEYQILRNASLAVLREIGVDTGGSNVQFSINPKDGRM 302

Query: 382  MVIEMNPRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYV 440
            +VIEMNPRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ N+IT   TPASFEP+IDYV
Sbjct: 303  VVIEMNPRVSRSSALASKATGFPIAKVAAKLAVGYTLDELKNEITGGATPASFEPTIDYV 362

Query: 441  VTKIPRFAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVK 500
            VTKIPRFAFEKF  ++  LTTQMKSVGE MA+GRTFQESFQKALR LE G  G     + 
Sbjct: 363  VTKIPRFAFEKFREADSRLTTQMKSVGEVMAIGRTFQESFQKALRGLEVGVDG-----LD 417

Query: 501  ELDWDWEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQF 560
            E     +++   +  P PDR+  +  A + GM  ++I E + ID WFL Q ++++  E+ 
Sbjct: 418  EKTTSRDEIIREIGEPGPDRIWYVGDAFRVGMSREQIFEETAIDPWFLAQIEQIVLKEKA 477

Query: 561  LLTQSVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAE 620
            L  ++++++TKD+ + +K+ GFSD+++A    +T  +VR +RL L V P YKRVDTCAAE
Sbjct: 478  LAGRTLASLTKDELHYLKQSGFSDRRLAKLLGATPADVRARRLELNVRPVYKRVDTCAAE 537

Query: 621  FEANTPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYET 680
            F   T YMYS+Y+ ECE+ PT  KK+++LGGGPNRIGQGIEFDYCC H + +++  GYET
Sbjct: 538  FATKTAYMYSTYEEECEAQPTDNKKIMVLGGGPNRIGQGIEFDYCCVHAALAMREDGYET 597

Query: 681  IMMNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQ 740
            IM+N NPETVSTDYDTSDRLYFEPLT+EDVL ++D E+P G+IVQ+GGQTPLKL+L    
Sbjct: 598  IMVNCNPETVSTDYDTSDRLYFEPLTLEDVLEIVDKEKPVGVIVQYGGQTPLKLALD--- 654

Query: 741  YLDEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALA 800
             L+ H +P         I GTSPD IDAAEDRERF  ++++L + QP    A++E +ALA
Sbjct: 655  -LEAHGVP---------IIGTSPDMIDAAEDRERFQKLLQDLGLRQPPNRTARAEDEALA 704

Query: 801  IAKEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEID 860
            +A EIGYP+VVRPSYVLGGRAMEIV+    L  Y+  AV+V  + PVL+D++L+DAIE D
Sbjct: 705  LADEIGYPLVVRPSYVLGGRAMEIVHEPRDLERYMREAVKVSNDSPVLLDRFLNDAIECD 764

Query: 861  VDALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNV 920
            VD + D    V IGG+MEHIEQAGVHSGDSAC +P  ++S   +  +   T  +AK LNV
Sbjct: 765  VDCICDG-DAVFIGGVMEHIEQAGVHSGDSACSLPPYSLSKETVAELKRQTAAMAKALNV 823

Query: 921  CGLMNCQYAI--------TTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKS 972
             GLMN Q+AI        +    +Y+LE NPRASRTVP+VSKA   PLAK AA  M G++
Sbjct: 824  VGLMNVQFAIQQVPQSDGSKEDVIYVLEVNPRASRTVPYVSKATSLPLAKIAARAMVGQT 883

Query: 973  LNDLGFTKEVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQI 1032
            L   G TKEV+P + SVKEAV PF KF   D +LGPEMRSTGEVMG+  +F  A  K+Q+
Sbjct: 884  LAQQGVTKEVVPPYFSVKEAVFPFIKFPTVDPVLGPEMRSTGEVMGVGATFGEALFKSQL 943

Query: 1033 AAGQKLPLSGTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLK 1092
            AAG +LP SGTV L++ D  KP    +AK   D+G+ +V+T GTA  +E  G+ V+ V K
Sbjct: 944  AAGSRLPESGTVLLTVMDADKPKAVEVAKMLHDLGYPLVATRGTAAAIEAAGVPVKVVNK 1003

Query: 1093 MHEGRPHAGDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAE 1152
            + +GRPH  DM+ NG+I ++  T         D   +R    A+KV   TT+SGA A  E
Sbjct: 1004 VKDGRPHIVDMIKNGEIALVFTTVDETRAAIADSRSIRMSAQAHKVTYYTTMSGARAAVE 1063

Query: 1153 AIRSLK 1158
             +R LK
Sbjct: 1064 GLRYLK 1069


>gi|259907380|ref|YP_002647736.1| carbamoyl phosphate synthase large subunit [Erwinia pyrifoliae
            Ep1/96]
 gi|387870130|ref|YP_005801500.1| carbamoyl-phosphate synthase large subunit [Erwinia pyrifoliae DSM
            12163]
 gi|224963002|emb|CAX54485.1| Carbamoyl-phosphate synthase large chain [Erwinia pyrifoliae Ep1/96]
 gi|283477213|emb|CAY73120.1| carbamoyl-phosphate synthase large chain [Erwinia pyrifoliae DSM
            12163]
          Length = 1084

 Score = 1225 bits (3169), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 612/1077 (56%), Positives = 784/1077 (72%), Gaps = 19/1077 (1%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILILGAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  E+V +++EKERPDA+LPTMGGQTALN A+ L   G L ++GV +IGA  DA
Sbjct: 63   ATYIEPIHWEVVRKIIEKERPDAVLPTMGGQTALNCALELERQGVLAEFGVTMIGATADA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  F  AMK+IG+ T  SGI +T++E +++A ++G FP IIRP+FT+GGTGGGI
Sbjct: 123  IDKAEDRRRFDVAMKSIGLDTARSGIAHTMEEALAVAADVG-FPCIIRPSFTMGGTGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEFE IC+ GL  S T+++L+++SL+GWKEYE+EV+RD  DN +I+CSIEN D MG
Sbjct: 182  AYNREEFEEICERGLDLSPTNELLIDESLIGWKEYEMEVVRDKNDNCIIVCSIENFDAMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            +HTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGVE GGSNVQF+VNP +G +++IEMN
Sbjct: 242  IHTGDSITVAPAQTLTDKEYQIMRNASMAVLREIGVETGGSNVQFSVNPENGRLIIIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKK-TPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT   TPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKIAAKLAVGYTLDELMNDITGGLTPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            F FEKF G+   LTTQMKSVGE MA+GRT QES QKALR LE G +G+            
Sbjct: 362  FNFEKFAGANDRLTTQMKSVGEVMAIGRTLQESMQKALRGLEVGANGFDPKVDLNDPEAL 421

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
              +++ L+    DR+  I  A + G+ V+++  L+ +D+WFL Q +EL+ +EQ +  Q V
Sbjct: 422  TTIRHELKDAGSDRIWYIADAFRAGLTVEDVFALTNVDRWFLVQIEELVQLEQQVAQQGV 481

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
            S +  D    +KR+GF+D +++      E E+R+ R    + P YKRVDTCAAEF  +T 
Sbjct: 482  SGLNCDFLRTLKRKGFADARLSALAGVPESEIRQLRAQYNLHPVYKRVDTCAAEFSTDTA 541

Query: 627  YMYSSYDFECESAPTQ-KKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNS 685
            YMYS+Y+ ECE+ P Q + K+++LGGGPNRIGQGIEFDYCC H S +L+  G+ETIM+N 
Sbjct: 542  YMYSTYEEECEANPNQDRDKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGFETIMVNC 601

Query: 686  NPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEH 745
            NPETVSTDYDTSDRLYFEP+T+EDVL ++ +E+P+G+IVQ+GGQTPLKL+          
Sbjct: 602  NPETVSTDYDTSDRLYFEPVTLEDVLEIVRIEKPKGVIVQYGGQTPLKLA---------- 651

Query: 746  RLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEI 805
            R   A+G   V + GTSPD+ID AEDRERF   ++ L ++QP      +   A+  A  I
Sbjct: 652  RALEAAG---VPVIGTSPDAIDRAEDRERFQQAVERLGLKQPANATVTAIDMAVEKAAMI 708

Query: 806  GYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALA 865
            GYP+VVRPSYVLGGRAMEIVY +  L  Y   AV V  + PVL+D++L DA+E+DVDA+ 
Sbjct: 709  GYPLVVRPSYVLGGRAMEIVYDEIDLKRYFNTAVSVSNDAPVLLDRFLDDAVEVDVDAIC 768

Query: 866  DSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMN 925
            D    V+IGGIMEHIEQAGVHSGDSAC +P  T+S+   + +     KLA  L V GLMN
Sbjct: 769  DG-EQVLIGGIMEHIEQAGVHSGDSACSLPAYTLSAEIQNVMRQQVEKLAFELGVRGLMN 827

Query: 926  CQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPK 985
             Q+A+  + +VYL+E NPRA+RTVPFVSKA G PLAK AA VM+GK+L   G TKE+IP 
Sbjct: 828  VQFAVKDN-EVYLIEVNPRAARTVPFVSKATGMPLAKVAARVMAGKTLAAQGVTKEIIPP 886

Query: 986  HVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVF 1045
            + SVKE VLPF KFQG D +LGPEMRSTGEVMG+  +F  AF KA + A   +  SG   
Sbjct: 887  YYSVKEVVLPFNKFQGVDPILGPEMRSTGEVMGVGRTFAEAFCKAMLGAQSNMKKSGRAL 946

Query: 1046 LSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVA 1105
            LS+ +  K  +  +A+     GF++ +T+GTA  L+  GI V  V K+HEGRPH  D + 
Sbjct: 947  LSVREGDKKRIVELARRLQAFGFELDATAGTASVLQAAGIDVRLVNKVHEGRPHIQDRLK 1006

Query: 1106 NGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTV 1162
            NG+   +V T++G    + D   +RR  L YKV   TT++G  A A ++ +  +  V
Sbjct: 1007 NGEYAYIVNTTAGRQAIE-DSKLIRRSALQYKVHYDTTLNGGFATATSLNASATGQV 1062


>gi|421100615|ref|ZP_15561238.1| carbamoyl-phosphate synthase, large subunit [Leptospira
            borgpetersenii str. 200901122]
 gi|410796418|gb|EKR98554.1| carbamoyl-phosphate synthase, large subunit [Leptospira
            borgpetersenii str. 200901122]
          Length = 1094

 Score = 1225 bits (3169), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 627/1109 (56%), Positives = 794/1109 (71%), Gaps = 58/1109 (5%)

Query: 98   LGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLADRTYITPMTPE 157
            +G+GPIVIGQACEFDYSGTQA KALKE+G  VIL+NSNPATIMTDP LAD TY+ PMT  
Sbjct: 1    MGSGPIVIGQACEFDYSGTQAAKALKEKGIRVILLNSNPATIMTDPDLADATYVEPMTVS 60

Query: 158  LVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDAIKKAEDRDLF 217
            +V+++LEKE+PDA+LPT+GGQTALNLA+A   +G LEKY VELIGAK+DAIKKAEDR+LF
Sbjct: 61   VVQKILEKEKPDAILPTVGGQTALNLALACNSAGLLEKYNVELIGAKVDAIKKAEDRELF 120

Query: 218  KQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGIAYNKEEFEAI 277
            K+AM+ IGV+ P SG+ N L +   I  ++G  PLI+RPAFTLGGTGGGIAY +E FE +
Sbjct: 121  KKAMEKIGVRVPASGLANNLTDAAEIKKKLG-LPLIVRPAFTLGGTGGGIAYTEENFEEV 179

Query: 278  CKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMGVHTGDSITVA 337
               GL AS  SQVL+E+S+LGWKE+ELEVMRDLADNVVIICSIEN+DPMGVHTGDSITVA
Sbjct: 180  VSKGLKASPISQVLLEESVLGWKEFELEVMRDLADNVVIICSIENIDPMGVHTGDSITVA 239

Query: 338  PAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMNPRVSRSSALA 397
            P QTL+DKEYQ LRD SIAIIREIGVE GGSN+QFAVNP +G+V+VIEMNPRVSRSSALA
Sbjct: 240  PQQTLSDKEYQNLRDMSIAIIREIGVETGGSNIQFAVNPTNGDVIVIEMNPRVSRSSALA 299

Query: 398  SKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRFAFEKFPGSEP 457
            SKATGFPIAK+AA LS+GY+LD+I NDIT+ TPASFEPSIDYVVTK+PRFAFEKFPG++ 
Sbjct: 300  SKATGFPIAKIAALLSIGYTLDEINNDITRVTPASFEPSIDYVVTKVPRFAFEKFPGTDD 359

Query: 458  LLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSN-VKEL--------DWDWEQ 508
             L  QMK+VGEAMA+GRTF+ESFQKALRSLE    G+G     +EL        D   E 
Sbjct: 360  TLGVQMKAVGEAMAIGRTFKESFQKALRSLEIDRYGFGSDGYFQELLYARSLNSDQRKEW 419

Query: 509  LKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSVSN 568
            +   L+ PN  R+  I  A  +   VD+IH+L  +D+WFL Q ++L  +E+    +  S 
Sbjct: 420  IDSFLKRPNDKRIFYIKLAFDEKYTVDQIHDLCKVDRWFLWQMEDLFKLEKEYFEKGDSV 479

Query: 569  MTKDDFYEVKRRGFSDKQIAFAT--------------------------KSTEKEVREKR 602
            + K     +K+ GFS++Q++F                            K +E+E+  K 
Sbjct: 480  LAK-----MKQAGFSNRQLSFLKNKKQILDLLDGGLRVDLKKTEIQNILKKSEEEIETKL 534

Query: 603  LSLGVIPSYKRVDTCAAEFEANTPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEF 662
             S  ++P YKR+DTCA EFEA TPY YSSYD E ES  T  K V+ILGGGPNRIGQGIEF
Sbjct: 535  SSEKILPIYKRIDTCAGEFEAYTPYFYSSYDEEDESDVTSTKSVMILGGGPNRIGQGIEF 594

Query: 663  DYCCCHTSFSLQSAGYETIMMNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGI 722
            DYCCC  S++LQ  G E+IM+NSNPETVSTDYDTSDRLYFEPLT+EDV  +   E+PEG+
Sbjct: 595  DYCCCQASYALQDLGVESIMVNSNPETVSTDYDTSDRLYFEPLTLEDVYCIYQNEKPEGV 654

Query: 723  IVQFGGQTPLKLSLPIHQYLDEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKEL 782
            I+QFGGQTPLKL+  + +           G   V+I GTSPDSID AEDR+RF  ++++L
Sbjct: 655  IIQFGGQTPLKLAKDLER----------KG---VKILGTSPDSIDRAEDRKRFVEVLEKL 701

Query: 783  SIEQPKGGIAKSEADALAIAKEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVD 842
             +  P+ GIA S  +A  IA+++ YP++VRPSYVLGGRAM I+  ++ L  Y+E A E+ 
Sbjct: 702  KLHSPESGIATSMEEAREIAQKVKYPILVRPSYVLGGRAMLIINEEKELDRYMEKAEEIS 761

Query: 843  PERPVLIDKYLSDAIEIDVDALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSS 902
             +RP+LID +L DA+E+DVDAL D    V + GIMEHIE+AGVHSGDSAC++P +T+S +
Sbjct: 762  KDRPLLIDSFLEDAVEVDVDALCDG-KEVFVTGIMEHIEEAGVHSGDSACILPPQTLSKN 820

Query: 903  CLDTISSWTIKLAKRLNVCGLMNCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAK 962
             +D I   T+ LA  L V GL+N QYA+     +Y++E NPRASRTVPFVSKA+GHP+ K
Sbjct: 821  MMDEIRKATVDLALELQVKGLINIQYAVKNE-ILYIIEVNPRASRTVPFVSKALGHPIVK 879

Query: 963  YAALVMSGKSLNDLGFTKEVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMS 1022
            YA  +M G+SL  L   KE+    VSVKE VLPF KF G D +LGPEMRSTGEVMGI  +
Sbjct: 880  YATRIMMGESLKSLPLPKEMAFSQVSVKEVVLPFNKFPGVDTILGPEMRSTGEVMGIAST 939

Query: 1023 FPIAFAKAQIAAGQKLPLSGTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLEL 1082
               AF K+Q  AG +LP  GTVF+S+ND TK  L    K   ++GF +++TSGT  FL  
Sbjct: 940  VGEAFLKSQYMAGDELPSQGTVFVSINDKTKSELLSYIKDLSELGFNLIATSGTHKFLSD 999

Query: 1083 KGIAVERVLKMHEG-RPHAGDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVI 1141
             GI   ++ K+++G  P A D +   +I  ++I +    + + D   +R+  + +KVP +
Sbjct: 1000 NGILSSKINKVYDGIFPTALDYIRENKIH-LIINTPLSRVTRDDSFTIRQAAIRFKVPCL 1058

Query: 1142 TTVSGALANAEAIRSLKSNTVTMTALQDF 1170
            TT + A A  + +  +K+    + +LQ+ 
Sbjct: 1059 TTSNAAKALIKGMVEMKNKGFAIHSLQEI 1087



 Score =  222 bits (566), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 135/395 (34%), Positives = 220/395 (55%), Gaps = 21/395 (5%)

Query: 90  TDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLADRT 149
           T  + ++ILG GP  IGQ  EFDY   QA  AL++ G E I++NSNP T+ TD   +DR 
Sbjct: 573 TSTKSVMILGGGPNRIGQGIEFDYCCCQASYALQDLGVESIMVNSNPETVSTDYDTSDRL 632

Query: 150 YITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDAIK 209
           Y  P+T E V  + + E+P+ ++   GGQT L LA        LE+ GV+++G   D+I 
Sbjct: 633 YFEPLTLEDVYCIYQNEKPEGVIIQFGGQTPLKLA------KDLERKGVKILGTSPDSID 686

Query: 210 KAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGIAY 269
           +AEDR  F + ++ + + +P SGI  +++E   IA ++ ++P+++RP++ LGG    I  
Sbjct: 687 RAEDRKRFVEVLEKLKLHSPESGIATSMEEAREIAQKV-KYPILVRPSYVLGGRAMLIIN 745

Query: 270 NKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMGVH 329
            ++E +   +     S    +L++  L    E +++ + D    V +   +E+++  GVH
Sbjct: 746 EEKELDRYMEKAEEISKDRPLLIDSFLEDAVEVDVDALCD-GKEVFVTGIMEHIEEAGVH 804

Query: 330 TGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVM-VIEMNP 388
           +GDS  + P QTL+      +R  ++ +  E+ V+ G  N+Q+AV     E++ +IE+NP
Sbjct: 805 SGDSACILPPQTLSKNMMDEIRKATVDLALELQVK-GLINIQYAVK---NEILYIIEVNP 860

Query: 389 RVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRFA 448
           R SR+    SKA G PI K A ++ +G SL  +P     K  A  + S+  VV       
Sbjct: 861 RASRTVPFVSKALGHPIVKYATRIMMGESLKSLP---LPKEMAFSQVSVKEVV-----LP 912

Query: 449 FEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKA 483
           F KFPG + +L  +M+S GE M +  T  E+F K+
Sbjct: 913 FNKFPGVDTILGPEMRSTGEVMGIASTVGEAFLKS 947


>gi|153001909|ref|YP_001367590.1| carbamoyl phosphate synthase large subunit [Shewanella baltica OS185]
 gi|151366527|gb|ABS09527.1| carbamoyl-phosphate synthase, large subunit [Shewanella baltica
            OS185]
          Length = 1074

 Score = 1225 bits (3169), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 612/1077 (56%), Positives = 781/1077 (72%), Gaps = 18/1077 (1%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILILGAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  E+V  ++ KERPDA+LPTMGGQTALN A+ L   G L+++ VE+IGA  DA
Sbjct: 63   ATYIEPIHWEVVRNIIAKERPDAILPTMGGQTALNCALELEAKGVLKEFNVEMIGATADA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  F +AMK+IG+  P +GI + ++E   + +++G FP IIRP+FT+GG+GGGI
Sbjct: 123  IDKAEDRSRFDKAMKSIGLDCPRAGIAHNMEEAYGVLDQVG-FPCIIRPSFTMGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYNKEEFE IC  GL  S TS++L+++SL+GWKEYE+EV+RD  DN +I+C+IEN DPMG
Sbjct: 182  AYNKEEFEEICSQGLELSPTSELLIDESLIGWKEYEMEVVRDRNDNCIIVCAIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGVE GGSNVQF +NP DG +++IEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQIMRNASMAVLREIGVETGGSNVQFGINPKDGRMVIIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VG++LD++ NDIT  +TPASFEP+IDYVVTK+PR
Sbjct: 302  PRVSRSSALASKATGFPIAKIAAKLAVGFTLDELMNDITGGRTPASFEPAIDYVVTKVPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            F FEKF G+   LTTQMKSVGE MA+GRTFQES QKALR LE   +G             
Sbjct: 362  FNFEKFAGANDRLTTQMKSVGEVMAIGRTFQESLQKALRGLEVSRNGLDPITDMAKPEAM 421

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
            +++++ L+ P  DR+  I  AM+ G+ +DEI +L+ ID WFL Q +EL+ +E  +    +
Sbjct: 422  QRIRHELKEPGCDRIWYIADAMRAGLSLDEIFKLTNIDPWFLVQIEELVQLEGVVADSGL 481

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
            + +  D   ++KR+GF+D ++A      E EVR+ R    + P YKRVDTCAAEF  +T 
Sbjct: 482  AGLDIDLLRKLKRKGFADARLADVLGVNEAEVRKLRDKFDLHPVYKRVDTCAAEFATDTA 541

Query: 627  YMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSN 686
            YMYS+Y+ ECE+ P+ + K+++LGGGPNRIGQGIEFDYCC H + +L+  GYETIM+N N
Sbjct: 542  YMYSTYEEECEANPSTRDKIMVLGGGPNRIGQGIEFDYCCVHAALALREDGYETIMVNCN 601

Query: 687  PETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHR 746
            PETVSTDYDTSDRLYFEP+T+EDVL ++ +E+P+G+IVQ+GGQTPLKL+          R
Sbjct: 602  PETVSTDYDTSDRLYFEPVTLEDVLEIVRIEKPKGVIVQYGGQTPLKLA----------R 651

Query: 747  LPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEIG 806
               A+G   V + GTSPD+ID AEDRERF   I+ L ++QP+     +   A+  A+ IG
Sbjct: 652  ALEAAG---VPVIGTSPDAIDRAEDRERFQQAIQRLEMKQPENDTVTTVEGAVIAAERIG 708

Query: 807  YPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALAD 866
            YP+VVRPSYVLGGRAMEIVY  + L+ Y   AV V    PVL+D++L DAIE+D+DA+ D
Sbjct: 709  YPLVVRPSYVLGGRAMEIVYDKQDLLRYFNEAVSVSNASPVLLDRFLDDAIEVDIDAVCD 768

Query: 867  SCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNC 926
                VVIG IMEHIEQAGVHSGDS C +P  T+S    D +     KLA  L V GLMN 
Sbjct: 769  G-EIVVIGAIMEHIEQAGVHSGDSGCSLPPYTLSQEIQDRMRVQVGKLAMELGVVGLMNV 827

Query: 927  QYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPKH 986
            Q+A+  + ++Y++E NPRA+RTVPFVSKA G PLAK AA VM+G+SL    FTKEVIP  
Sbjct: 828  QFAVKDN-EIYMIEVNPRAARTVPFVSKATGVPLAKIAARVMAGQSLTSQNFTKEVIPPF 886

Query: 987  VSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVFL 1046
             SVKE VLPF KF G D LLGPEMRSTGEVMG+  +F  A+AKAQ+ A  ++P SG   L
Sbjct: 887  YSVKEVVLPFNKFPGVDPLLGPEMRSTGEVMGVGDTFAEAYAKAQLGATSEVPKSGRALL 946

Query: 1047 SLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVAN 1106
            S+ +  K  +  +A   +++G++I +T GTA  L   GI    V K+HEGRPH  D + N
Sbjct: 947  SVRNSDKKRVADLAAKLIELGYQIDATHGTAIILGEAGINPRLVNKVHEGRPHILDRIKN 1006

Query: 1107 GQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTVT 1163
            G+   +V T+ G    + D  +LRR  L YKV   TT++ A A   A  +     VT
Sbjct: 1007 GEYTYIVNTTEGRQAIE-DSRQLRRGALRYKVNYTTTMNAAFATCMAHAADDRTNVT 1062


>gi|5821976|pdb|1CE8|A Chain A, Carbamoyl Phosphate Synthetase From Escherichis Coli With
            Complexed With The Allosteric Ligand Imp
 gi|5821978|pdb|1CE8|C Chain C, Carbamoyl Phosphate Synthetase From Escherichis Coli With
            Complexed With The Allosteric Ligand Imp
 gi|5821980|pdb|1CE8|E Chain E, Carbamoyl Phosphate Synthetase From Escherichis Coli With
            Complexed With The Allosteric Ligand Imp
 gi|5821982|pdb|1CE8|G Chain G, Carbamoyl Phosphate Synthetase From Escherichis Coli With
            Complexed With The Allosteric Ligand Imp
 gi|22219401|pdb|1M6V|A Chain A, Crystal Structure Of The G359f (Small Subunit) Point Mutant
            Of Carbamoyl Phosphate Synthetase
 gi|22219403|pdb|1M6V|C Chain C, Crystal Structure Of The G359f (Small Subunit) Point Mutant
            Of Carbamoyl Phosphate Synthetase
 gi|22219405|pdb|1M6V|E Chain E, Crystal Structure Of The G359f (Small Subunit) Point Mutant
            Of Carbamoyl Phosphate Synthetase
 gi|22219407|pdb|1M6V|G Chain G, Crystal Structure Of The G359f (Small Subunit) Point Mutant
            Of Carbamoyl Phosphate Synthetase
          Length = 1073

 Score = 1225 bits (3169), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 618/1071 (57%), Positives = 781/1071 (72%), Gaps = 19/1071 (1%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILILGAGPIVIGQACEFDYSG QACKAL+EEGY VI +NSNPATIMTDP +AD
Sbjct: 3    KRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVINVNSNPATIMTDPEMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  E+V +++EKERPDA+LPTMGGQTALN A+ L   G LE++GV +IGA  DA
Sbjct: 63   ATYIEPIHWEVVRKIIEKERPDAVLPTMGGQTALNCALELERQGVLEEFGVTMIGATADA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  F  AMK IG++T  SGI +T++E +++A ++G FP IIRP+FT+GG+GGGI
Sbjct: 123  IDKAEDRRRFDVAMKKIGLETARSGIAHTMEEALAVAADVG-FPCIIRPSFTMGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEFE IC  GL  S T ++L+++SL+GWKEYE+EV+RD  DN +I+CSIEN D MG
Sbjct: 182  AYNREEFEEICARGLDLSPTKELLIDESLIGWKEYEMEVVRDKNDNCIIVCSIENFDAMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            +HTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGVE GGSNVQFAVNP +G ++VIEMN
Sbjct: 242  IHTGDSITVAPAQTLTDKEYQIMRNASMAVLREIGVETGGSNVQFAVNPKNGRLIVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT  +TPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGYTLDELMNDITGGRTPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            F FEKF G+   LTTQMKSVGE MA+GRT QES QKALR LE G +G+      +     
Sbjct: 362  FNFEKFAGANDRLTTQMKSVGEVMAIGRTQQESLQKALRGLEVGATGFDPKVSLDDPEAL 421

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
             +++  L+    DR+  I  A + G+ VD +  L+ ID+WFL Q +EL+ +E+ +    +
Sbjct: 422  TKIRRELKDAGADRIWYIADAFRAGLSVDGVFNLTNIDRWFLVQIEELVRLEEKVAEVGI 481

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
            + +  D   ++KR+GF+D ++A      E E+R+ R    + P YKRVDTCAAEF  +T 
Sbjct: 482  TGLNADFLRQLKRKGFADARLAKLAGVREAEIRKLRDQYDLHPVYKRVDTCAAEFATDTA 541

Query: 627  YMYSSYDFECESAP-TQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNS 685
            YMYS+Y+ ECE+ P T ++K+++LGGGPNRIGQGIEFDYCC H S +L+  GYETIM+N 
Sbjct: 542  YMYSTYEEECEANPSTDREKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVNC 601

Query: 686  NPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEH 745
            NPETVSTDYDTSDRLYFEP+T+EDVL ++ +E+P+G+IVQ+GGQTPLKL+          
Sbjct: 602  NPETVSTDYDTSDRLYFEPVTLEDVLEIVRIEKPKGVIVQYGGQTPLKLA---------- 651

Query: 746  RLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEI 805
            R   A+G   V + GTSPD+ID AEDRERF   ++ L ++QP      +   A+  AKEI
Sbjct: 652  RALEAAG---VPVIGTSPDAIDRAEDRERFQHAVERLKLKQPANATVTAIEMAVEKAKEI 708

Query: 806  GYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALA 865
            GYP+VVRPSYVLGGRAMEIVY +  L  Y + AV V  + PVL+D +L DA+E+DVDA+ 
Sbjct: 709  GYPLVVRPSYVLGGRAMEIVYDEADLRRYFQTAVSVSNDAPVLLDHFLDDAVEVDVDAIC 768

Query: 866  DSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMN 925
            D    V+IGGIMEHIEQAGVHSGDSAC +P  T+S    D +     KLA  L V GLMN
Sbjct: 769  DG-EMVLIGGIMEHIEQAGVHSGDSACSLPAYTLSQEIQDVMRQQVQKLAFELQVRGLMN 827

Query: 926  CQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPK 985
             Q+A+  + +VYL+E NPRA+RTVPFVSKA G PLAK AA VM+GKSL + G TKEVIP 
Sbjct: 828  VQFAVKNN-EVYLIEVNPRAARTVPFVSKATGVPLAKVAARVMAGKSLAEQGVTKEVIPP 886

Query: 986  HVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVF 1045
            + SVKE VLPF KF G D LLGPEMRSTGEVMG+  +F  AFAKAQ+ +   +   G   
Sbjct: 887  YYSVKEVVLPFNKFPGVDPLLGPEMRSTGEVMGVGRTFAEAFAKAQLGSNSTMKKHGRAL 946

Query: 1046 LSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVA 1105
            LS+ +  K  +  +A   L  GF++ +T GTA  L   GI    V K+HEGRPH  D + 
Sbjct: 947  LSVREGDKERVVDLAAKLLKQGFELDATHGTAIVLGEAGINPRLVNKVHEGRPHIQDRIK 1006

Query: 1106 NGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRS 1156
            NG+   ++ T+SG    + D   +RR  L YKV   TT++G  A A A+ +
Sbjct: 1007 NGEYTYIINTTSGRRAIE-DSRVIRRSALQYKVHYDTTLNGGFATAMALNA 1056


>gi|170768490|ref|ZP_02902943.1| carbamoyl-phosphate synthase, large subunit [Escherichia albertii
            TW07627]
 gi|170122594|gb|EDS91525.1| carbamoyl-phosphate synthase, large subunit [Escherichia albertii
            TW07627]
          Length = 1073

 Score = 1225 bits (3169), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 617/1071 (57%), Positives = 781/1071 (72%), Gaps = 19/1071 (1%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILILGAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  E+V +++EKERPDA+LPTMGGQTALN A+ L   G LE++GV +IGA  DA
Sbjct: 63   ATYIEPIHWEVVRKIIEKERPDAVLPTMGGQTALNCALELERQGVLEEFGVTMIGATADA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  F  AMK IG++T  SGI ++++E +++A E+G FP IIRP+FT+GG+GGGI
Sbjct: 123  IDKAEDRRRFDVAMKKIGLETARSGIAHSMEEALAVAAEVG-FPCIIRPSFTMGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEFE IC  GL  S T ++L+++SL+GWKEYE+EV+RD  DN +I+CSIEN D MG
Sbjct: 182  AYNREEFEEICARGLDLSPTKELLIDESLIGWKEYEMEVVRDKNDNCIIVCSIENFDAMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            +HTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGVE GGSNVQFAVNP +G ++VIEMN
Sbjct: 242  IHTGDSITVAPAQTLTDKEYQIMRNASMAVLREIGVETGGSNVQFAVNPKNGRLIVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT  +TPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGYTLDELMNDITGGRTPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            F FEKF G+   LTTQMKSVGE MA+GRT QES QKALR LE G +G+      +     
Sbjct: 362  FNFEKFAGANDRLTTQMKSVGEVMAIGRTQQESLQKALRGLEVGATGFDPKVSLDDPEAL 421

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
             +++  L+    +R+  I  A + G+ VD +  L+ ID+WFL Q +EL+ +E+ +    +
Sbjct: 422  TKIRRELKDAGAERIWYIADAFRAGLSVDGVFNLTNIDRWFLVQIEELVRLEEKVAEVGI 481

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
            + +  D   ++KR+GF+D ++A      E E+R+ R    + P YKRVDTCAAEF  +T 
Sbjct: 482  TGLNADFLRQLKRKGFADARLAKLAGVREAEIRKLRDQYDLHPVYKRVDTCAAEFATDTA 541

Query: 627  YMYSSYDFECESAP-TQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNS 685
            YMYS+Y+ ECE+ P T ++K+++LGGGPNRIGQGIEFDYCC H S +L+  GYETIM+N 
Sbjct: 542  YMYSTYEEECEANPSTDREKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVNC 601

Query: 686  NPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEH 745
            NPETVSTDYDTSDRLYFEP+T+EDVL ++ +E+P+G+IVQ+GGQTPLKL+          
Sbjct: 602  NPETVSTDYDTSDRLYFEPVTLEDVLEIVRIEKPKGVIVQYGGQTPLKLA---------- 651

Query: 746  RLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEI 805
            R   A+G   V + GTSPD+ID AEDRERF   +  L ++QP      +   A+  AKEI
Sbjct: 652  RALEAAG---VPVIGTSPDAIDRAEDRERFQHAVDRLKLKQPANATVTTIEMAVEKAKEI 708

Query: 806  GYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALA 865
            GYP+VVRPSYVLGGRAMEIVY +  L  Y + AV V  + PVL+D +L DA+E+DVDA+ 
Sbjct: 709  GYPLVVRPSYVLGGRAMEIVYDEADLRRYFQTAVSVSNDAPVLLDHFLDDAVEVDVDAIC 768

Query: 866  DSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMN 925
            D    V+IGGIMEHIEQAGVHSGDSAC +P  T+S    D +     KLA  L V GLMN
Sbjct: 769  DG-EMVLIGGIMEHIEQAGVHSGDSACSLPAYTLSQEIQDVMRQQVQKLAFELQVRGLMN 827

Query: 926  CQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPK 985
             Q+A+  + +VYL+E NPRA+RTVPFVSKA G PLAK AA VM+GK+L + G TKEVIP 
Sbjct: 828  VQFAVKNN-EVYLIEVNPRAARTVPFVSKATGVPLAKVAARVMAGKTLAEQGVTKEVIPP 886

Query: 986  HVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVF 1045
            + SVKE VLPF KF G D LLGPEMRSTGEVMG+  +F  AFAKAQ+ +   +   G   
Sbjct: 887  YYSVKEVVLPFNKFPGVDPLLGPEMRSTGEVMGVGRTFAEAFAKAQLGSNSTMKKHGRAL 946

Query: 1046 LSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVA 1105
            LS+ +  K  +  +A   L  GF++ +T GTA  L   GI    V K+HEGRPH  D + 
Sbjct: 947  LSVREGDKERVVDLAAKLLKQGFELDATHGTAIVLGEAGINPRLVNKVHEGRPHIQDRIK 1006

Query: 1106 NGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRS 1156
            NG+   ++ T+SG    + D   +RR  L YKV   TT++G  A A A+ +
Sbjct: 1007 NGEYTYIINTTSGRRAIE-DSRVIRRSALQYKVHYDTTLNGGFATAMALNA 1056


>gi|197334608|ref|YP_002155229.1| carbamoyl phosphate synthase large subunit [Vibrio fischeri MJ11]
 gi|197316098|gb|ACH65545.1| carbamoyl-phosphate synthase, large subunit [Vibrio fischeri MJ11]
          Length = 1076

 Score = 1225 bits (3169), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 617/1079 (57%), Positives = 781/1079 (72%), Gaps = 22/1079 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ +LILGAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIKSVLILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPDMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  E+V  ++EKERPDA+LPTMGGQTALN A+ L + G L ++GVE+IGA  DA
Sbjct: 63   ATYIEPIHWEVVRNIIEKERPDAVLPTMGGQTALNCALDLEKHGVLAEFGVEMIGATADA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  F +AMK+IG++ P +    T+DE   + + +G FP IIRP+FT+GGTGGGI
Sbjct: 123  IDKAEDRSRFDKAMKSIGLECPRADTAKTMDEAYQVLDMVG-FPCIIRPSFTMGGTGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYNKEEFE IC+ GL  S T+++L+++SL+GWKEYE+EV+RD  DN +I+C+IEN D MG
Sbjct: 182  AYNKEEFEEICRRGLDLSPTNELLIDESLIGWKEYEMEVVRDKNDNCIIVCAIENFDAMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            +HTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGVE GGSNVQF +NP DG +++IEMN
Sbjct: 242  IHTGDSITVAPAQTLTDKEYQLMRNASLAVLREIGVETGGSNVQFGINPKDGRMVIIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL++G++LD++ NDIT   TPASFEP+IDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKIAAKLAIGFTLDELMNDITGGATPASFEPTIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWD- 505
            F FEKF G+   LTTQMKSVGE MA+GR  QES QKALR LE G +G+    + +LD   
Sbjct: 362  FNFEKFAGANDRLTTQMKSVGEVMAIGRNQQESLQKALRGLEVGATGF--DEMVDLDAPD 419

Query: 506  -WEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQ 564
               ++++ L+    +R+  I  A + GM VD +  L+ +D+WFL Q ++L+  E+ +   
Sbjct: 420  ALTKIRHELKDAGAERIWYIADAFRAGMSVDGVFNLTNVDRWFLVQIEDLVKEEEAVKAG 479

Query: 565  SVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEAN 624
              +N+T D   ++KR+GF+D +++      E E+R  R    + P YKRVDTCAAEF ++
Sbjct: 480  GFANLTADALRKLKRKGFADARLSKLLGVGESEIRRLRDQHDIHPVYKRVDTCAAEFSSD 539

Query: 625  TPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMN 684
            T YMYSSYD ECE+ PT K K++ILGGGPNRIGQGIEFDYCC H S +L+  GYETIM+N
Sbjct: 540  TAYMYSSYDEECEANPTDKDKIMILGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVN 599

Query: 685  SNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDE 744
             NPETVSTDYDTSDRLYFEP+T+EDVL +  +E+P+G+IVQ+GGQTPLKL+         
Sbjct: 600  CNPETVSTDYDTSDRLYFEPVTLEDVLAIARVEKPKGVIVQYGGQTPLKLA--------- 650

Query: 745  HRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKE 804
             R   A+G   V I GTSPD+ID AEDRERF   +  L + QP+     +   A+  +KE
Sbjct: 651  -RALEAAG---VPIIGTSPDAIDRAEDRERFQVAVDRLELLQPENATVTTMEQAIDKSKE 706

Query: 805  IGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDAL 864
            IG+P+VVRPSYVLGGRAMEIVY ++ L  Y   AV V  E PVL+D +L DAIE+DVDA+
Sbjct: 707  IGFPLVVRPSYVLGGRAMEIVYDEQDLRRYFNEAVSVSNESPVLLDSFLDDAIEVDVDAI 766

Query: 865  ADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLM 924
             D    VVIGGIMEHIEQAGVHSGDSAC +P  T+S    D +     KLA  L V GLM
Sbjct: 767  CDG-EQVVIGGIMEHIEQAGVHSGDSACSLPAYTLSEEIQDVMRDQVRKLAFELGVRGLM 825

Query: 925  NCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIP 984
            N Q+A+  +  VYL+E NPRA+RTVPFVSKA G PLAK AA VM+G+SL   GFTKE+IP
Sbjct: 826  NTQFAVKDN-KVYLIEVNPRAARTVPFVSKATGAPLAKIAARVMAGQSLESQGFTKEIIP 884

Query: 985  KHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTV 1044
             + SVKE VLPF KF G D LLGPEMRSTGEVMG+  +F  AFAKA++   ++ P  G  
Sbjct: 885  PYYSVKEVVLPFNKFPGVDPLLGPEMRSTGEVMGVGATFAEAFAKAELGCSKEYPEGGRA 944

Query: 1045 FLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMV 1104
             LS+ +  K  +  +AK  + +G+++ +T GTA  L   GI    V K+HEGRPH  D +
Sbjct: 945  LLSVREGDKKRVVDLAKHLVKLGYQLDATHGTAVILGEAGINPRLVNKVHEGRPHILDRI 1004

Query: 1105 ANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTVT 1163
             NG+   +V T++G    + D   LRR  LA KV   TT++ A A+  A  +    TV 
Sbjct: 1005 KNGEYTYIVNTAAGRQAIE-DSKVLRRGALAEKVNYTTTLNAAFASCLAHEADDRKTVN 1062



 Score =  251 bits (642), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 163/422 (38%), Positives = 241/422 (57%), Gaps = 24/422 (5%)

Query: 67  KIDS-SAELSNGAA---SSKDQKL-GKRTDLRKILILGAGPIVIGQACEFDYSGTQACKA 121
           ++D+ +AE S+  A   SS D++     TD  KI+ILG GP  IGQ  EFDY    A  A
Sbjct: 528 RVDTCAAEFSSDTAYMYSSYDEECEANPTDKDKIMILGGGPNRIGQGIEFDYCCVHASLA 587

Query: 122 LKEEGYEVILINSNPATIMTDPGLADRTYITPMTPELVEQVLEKERPDALLPTMGGQTAL 181
           L+E+GYE I++N NP T+ TD   +DR Y  P+T E V  +   E+P  ++   GGQT L
Sbjct: 588 LREDGYETIMVNCNPETVSTDYDTSDRLYFEPVTLEDVLAIARVEKPKGVIVQYGGQTPL 647

Query: 182 NLAVALAESGALEKYGVELIGAKLDAIKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECI 241
            LA       ALE  GV +IG   DAI +AEDR+ F+ A+  + +  P +    T+++ I
Sbjct: 648 KLA------RALEAAGVPIIGTSPDAIDRAEDRERFQVAVDRLELLQPENATVTTMEQAI 701

Query: 242 SIANEIGEFPLIIRPAFTLGGTGGGIAYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKE 301
             + EIG FPL++RP++ LGG    I Y++++        ++ S  S VL++  L    E
Sbjct: 702 DKSKEIG-FPLVVRPSYVLGGRAMEIVYDEQDLRRYFNEAVSVSNESPVLLDSFLDDAIE 760

Query: 302 YELEVMRDLADNVVIICSIENVDPMGVHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREI 361
            +++ + D  + VVI   +E+++  GVH+GDS    PA TL+++    +RD    +  E+
Sbjct: 761 VDVDAICD-GEQVVIGGIMEHIEQAGVHSGDSACSLPAYTLSEEIQDVMRDQVRKLAFEL 819

Query: 362 GVECGGSNVQFAVNPVDGEVMVIEMNPRVSRSSALASKATGFPIAKMAAKLSVGYSLDQI 421
           GV  G  N QFAV   D +V +IE+NPR +R+    SKATG P+AK+AA++  G SL+  
Sbjct: 820 GVR-GLMNTQFAVK--DNKVYLIEVNPRAARTVPFVSKATGAPLAKIAARVMAGQSLES- 875

Query: 422 PNDITKKTPASFEPSIDYVVTKIPRFAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQ 481
               TK+    +     Y V ++    F KFPG +PLL  +M+S GE M +G TF E+F 
Sbjct: 876 -QGFTKEIIPPY-----YSVKEVV-LPFNKFPGVDPLLGPEMRSTGEVMGVGATFAEAFA 928

Query: 482 KA 483
           KA
Sbjct: 929 KA 930


>gi|417160327|ref|ZP_11997246.1| carbamoyl-phosphate synthase, large subunit [Escherichia coli
            99.0741]
 gi|386174818|gb|EIH46811.1| carbamoyl-phosphate synthase, large subunit [Escherichia coli
            99.0741]
          Length = 1073

 Score = 1225 bits (3169), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 617/1071 (57%), Positives = 782/1071 (73%), Gaps = 19/1071 (1%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILILGAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  E+V +++EKERPDA+LPTMGGQTALN A+ L   G LE++GV +IGA  DA
Sbjct: 63   ATYIEPIHWEVVRKIIEKERPDAVLPTMGGQTALNCALELERQGVLEEFGVTMIGATADA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  F  AMK IG++T  SGI +T++E +++A ++G FP IIRP+FT+GG+GGGI
Sbjct: 123  IDKAEDRRRFDVAMKKIGLETARSGIAHTMEEALAVAADVG-FPCIIRPSFTMGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEFE IC  GL  S T ++L+++SL+GWKEYE+EV+RD  DN +I+CSIEN D MG
Sbjct: 182  AYNREEFEEICARGLDLSPTKELLIDESLIGWKEYEMEVVRDKNDNCIIVCSIENFDAMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            +HTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGVE GGSNVQFAVNP +G ++VIEMN
Sbjct: 242  IHTGDSITVAPAQTLTDKEYQIMRNASMAVLREIGVETGGSNVQFAVNPKNGRLIVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT  +TPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGYTLDELMNDITGGRTPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            F FEKF G+   LTTQMKSVGE MA+GRT QES QKALR LE G +G+      +     
Sbjct: 362  FNFEKFAGANDRLTTQMKSVGEVMAIGRTQQESLQKALRGLEVGATGFDPKVSLDDPEAL 421

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
             +++  L+    +R+  I  A + G+ VD +  L+ ID+WFL Q +EL+ +E+ +    +
Sbjct: 422  TKIRRELKDAGAERIWYIADAFRAGLSVDGVFNLTNIDRWFLVQIEELVRLEEKVAEVGI 481

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
            + +  D   ++KR+GF+D ++A      E E+R+ R    + P YKRVDTCAAEF  +T 
Sbjct: 482  TGLNADFLRQLKRKGFADARLAKLAGVREAEIRKLRDQYDLHPVYKRVDTCAAEFATDTA 541

Query: 627  YMYSSYDFECESAP-TQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNS 685
            YMYS+Y+ ECE+ P T ++K+++LGGGPNRIGQGIEFDYCC H S +L+  G+ETIM+N 
Sbjct: 542  YMYSTYEEECEANPSTDREKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGFETIMVNC 601

Query: 686  NPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEH 745
            NPETVSTDYDTSDRLYFEP+T+EDVL ++ +E+P+G+IVQ+GGQTPLKL+          
Sbjct: 602  NPETVSTDYDTSDRLYFEPVTLEDVLEIVRIEKPKGVIVQYGGQTPLKLA---------- 651

Query: 746  RLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEI 805
            R   A+G   V + GTSPD+ID AEDRERF   ++ L ++QP      +   A+  AKEI
Sbjct: 652  RALEAAG---VPVIGTSPDAIDRAEDRERFQHAVERLKLKQPANATVTAIEMAVEKAKEI 708

Query: 806  GYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALA 865
            GYP+VVRPSYVLGGRAMEIVY +  L  Y + AV V  + PVL+D +L DA+E+DVDA+ 
Sbjct: 709  GYPLVVRPSYVLGGRAMEIVYDEADLRRYFQTAVSVSNDAPVLLDHFLDDAVEVDVDAIC 768

Query: 866  DSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMN 925
            D    V+IGGIMEHIEQAGVHSGDSAC +P  T+S    D +     KLA  L V GLMN
Sbjct: 769  DG-EMVLIGGIMEHIEQAGVHSGDSACSLPAYTLSQEIQDVMRQQVQKLAFELQVRGLMN 827

Query: 926  CQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPK 985
             Q+A+  + +VYL+E NPRA+RTVPFVSKA G PLAK AA VM+GKSL + G TKEVIP 
Sbjct: 828  VQFAVKNN-EVYLIEVNPRAARTVPFVSKATGVPLAKVAARVMAGKSLAEQGVTKEVIPP 886

Query: 986  HVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVF 1045
            + SVKE VLPF KF G D LLGPEMRSTGEVMG+  +F  AFAKAQ+ +   +   G   
Sbjct: 887  YYSVKEVVLPFNKFPGVDPLLGPEMRSTGEVMGVGRTFAEAFAKAQLGSNSTMKKHGRAL 946

Query: 1046 LSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVA 1105
            LS+ +  K  +  +A   L  GF++ +T GTA  L   GI    V K+HEGRPH  D + 
Sbjct: 947  LSVREGDKERVVDLAAKLLKQGFELDATHGTAIVLGEAGINPRLVNKVHEGRPHIQDRIK 1006

Query: 1106 NGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRS 1156
            NG+   ++ T+SG    + D   +RR  L YKV   TT++G  A A A+ +
Sbjct: 1007 NGEYTYIINTTSGRRAIE-DSRVIRRSALQYKVHYDTTLNGGFATAMALNA 1056


>gi|416508708|ref|ZP_11736155.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Montevideo str. SARB31]
 gi|416522728|ref|ZP_11740616.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Montevideo str. ATCC BAA710]
 gi|416564719|ref|ZP_11763443.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Montevideo str. 42N]
 gi|416572493|ref|ZP_11767238.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Montevideo str. 4441 H]
 gi|418513459|ref|ZP_13079689.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Pomona str. ATCC 10729]
 gi|363551166|gb|EHL35485.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Montevideo str. ATCC BAA710]
 gi|363551998|gb|EHL36305.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Montevideo str. SARB31]
 gi|363570066|gb|EHL54004.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Montevideo str. 42N]
 gi|363573045|gb|EHL56932.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Montevideo str. 4441 H]
 gi|366081820|gb|EHN45760.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Pomona str. ATCC 10729]
          Length = 1075

 Score = 1224 bits (3168), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 616/1078 (57%), Positives = 784/1078 (72%), Gaps = 19/1078 (1%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILILGAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  E+V +++EKERPDA+LPTMGGQTALN A+ L   G LE++GV +IGA  DA
Sbjct: 63   ATYIEPIHWEVVRKIIEKERPDAVLPTMGGQTALNCALELERQGVLEEFGVTMIGATADA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  F  AMK IG+ T  SGI +T++E +++A ++G FP IIRP+FT+GGTGGGI
Sbjct: 123  IDKAEDRRRFDIAMKKIGLDTARSGIAHTMEEALAVAADVG-FPCIIRPSFTMGGTGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEFE IC+ GL  S T+++L+++SL+GWKEYE+EV+RD  DN +I+CSIEN D MG
Sbjct: 182  AYNREEFEEICERGLDLSPTNELLIDESLIGWKEYEMEVVRDKNDNCIIVCSIENFDAMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            +HTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGVE GGSNVQFAVNP +G ++VIEMN
Sbjct: 242  IHTGDSITVAPAQTLTDKEYQIMRNASMAVLREIGVETGGSNVQFAVNPKNGRLIVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT  +TPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGYTLDELMNDITGGRTPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            F FEKF G+   LTTQMKSVGE MA+GRT QES QKALR LE G +G+      +     
Sbjct: 362  FNFEKFAGANDRLTTQMKSVGEVMAIGRTQQESLQKALRGLEVGATGFDPKVSLDDPEAL 421

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
             +++  L+    +R+  I  A + G+ VD +  L+ ID+WFL Q +EL+ +E+ +    +
Sbjct: 422  TKIRRELKDAGAERIWYIADAFRAGLSVDGVFNLTNIDRWFLVQIEELVRLEEKVAEVGI 481

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
            + +  D   ++KR+GF+D ++A      E E+R+ R    + P YKRVDTCAAEF  +T 
Sbjct: 482  TGLNADFLRQLKRKGFADARLAKLAGVREAEIRKLRDQYDLHPVYKRVDTCAAEFATDTA 541

Query: 627  YMYSSYDFECESAPT-QKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNS 685
            YMYS+Y+ ECE+ P+  + K+++LGGGPNRIGQGIEFDYCC H S +L+  GYETIM+N 
Sbjct: 542  YMYSTYEDECEANPSVDRDKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVNC 601

Query: 686  NPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEH 745
            NPETVSTDYDTSDRLYFEP+T+EDVL ++ +E+P+G+IVQ+GGQTPLKL+          
Sbjct: 602  NPETVSTDYDTSDRLYFEPVTLEDVLEIVRIEKPKGVIVQYGGQTPLKLA---------- 651

Query: 746  RLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEI 805
            R   A+G   V + GTSPD+ID AEDRERF   +  L ++QP      +   A+  AKEI
Sbjct: 652  RALEAAG---VPVIGTSPDAIDRAEDRERFQHAVDRLKLKQPANATVTAIEQAVEKAKEI 708

Query: 806  GYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALA 865
            GYP+VVRPSYVLGGRAMEIVY +  L  Y + AV V  + PVL+D++L DA+E+DVDA+ 
Sbjct: 709  GYPLVVRPSYVLGGRAMEIVYDEADLRRYFQTAVSVSNDAPVLLDRFLDDAVEVDVDAIC 768

Query: 866  DSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMN 925
            D    V+IGGIMEHIEQAGVHSGDSAC +P  T+S    D +     KLA  L V GLMN
Sbjct: 769  DG-EMVLIGGIMEHIEQAGVHSGDSACSLPAYTLSQEIQDVMRQQVQKLAFELQVRGLMN 827

Query: 926  CQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPK 985
             Q+A+  + +VYL+E NPRA+RTVPFVSKA G PLAK AA VM+GKSL + G T+E+IP 
Sbjct: 828  VQFAVKDN-EVYLIEVNPRAARTVPFVSKATGVPLAKVAARVMAGKSLTEQGVTQEIIPP 886

Query: 986  HVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVF 1045
            + SVKE VLPF KF G D LLGPEMRSTGEVMG+  +F  AFAKAQ+ +   +   G   
Sbjct: 887  YYSVKEVVLPFNKFPGVDPLLGPEMRSTGEVMGVGRTFAEAFAKAQLGSNSTMKKQGRAL 946

Query: 1046 LSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVA 1105
            LS+ +  K  +  +A   L  GF++ +T GTA  L   GI    V K+HEGRPH  D + 
Sbjct: 947  LSVREGDKERVVDLAAKLLKQGFELDATHGTAIVLGEAGINPRLVNKVHEGRPHIQDRIK 1006

Query: 1106 NGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTVT 1163
            NG+   ++ T++G    + D   +RR  L YKV   TT++G  A   A+ +  +  VT
Sbjct: 1007 NGEYTYIINTTAGRRAIE-DSRVIRRSALQYKVHYDTTLNGGFATTMALNADATEKVT 1063


>gi|399907844|ref|ZP_10776396.1| carbamoyl-phosphate synthase large subunit [Halomonas sp. KM-1]
          Length = 1076

 Score = 1224 bits (3168), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 626/1087 (57%), Positives = 798/1087 (73%), Gaps = 23/1087 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD+  ILI+GAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDINSILIIGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPVMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+T + VE+++E ERPDA+LPTMGGQTALN A+AL + G LEKYGVE+IGA  D 
Sbjct: 63   ATYIEPITWQAVEKIIEAERPDAILPTMGGQTALNCALALDKHGVLEKYGVEMIGANADT 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDRD F +AMK IG++ P + + ++++E   I  E+G FP+IIRP+FT+GG+GGG+
Sbjct: 123  IDKAEDRDRFDKAMKNIGLECPRAKVAHSMEEAWEIQAELG-FPVIIRPSFTMGGSGGGV 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYNKEEFE IC  G   S T ++L+++SLLGWKEYE+EV+RD  DN +I+C+IEN DPMG
Sbjct: 182  AYNKEEFEEICDRGFDLSPTKELLIDESLLGWKEYEMEVVRDKNDNCIIVCAIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ +RD S+A++REIGVE GGSNVQF V+P  G ++VIEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQIMRDASLAVLREIGVETGGSNVQFGVDPKTGRMVVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT  +TPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKIAAKLAVGYTLDELSNDITGGRTPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            F FEKFP +   LTTQMKSVGE MA+GRTFQES QKALR LE G  G      +  +   
Sbjct: 362  FTFEKFPQANDRLTTQMKSVGEVMAIGRTFQESLQKALRGLETGNDGLDPKVSEFTEEAM 421

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
            + +K  L+    +R+  I  AM+ G+ V+EI  L+ ID WFL Q +EL+ +EQ +  +S+
Sbjct: 422  QHIKGELQAAGAERIFYIADAMRAGLSVEEIFTLTNIDPWFLVQLEELVRIEQDVAKRSL 481

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
            S  +  + + +KR+GFSD ++A     +EKE R+ R   G+ P YKRVDTCAAEF ++T 
Sbjct: 482  SEFSAQELFRLKRKGFSDARLAKLLGVSEKEFRKTRQKAGIRPVYKRVDTCAAEFASDTA 541

Query: 627  YMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSN 686
            YMYS+Y+ ECE+  + ++K+++LGGGPNRIGQGIEFDYCC H +F+++  GYETIM+N N
Sbjct: 542  YMYSTYEEECEAEVSDRQKIMVLGGGPNRIGQGIEFDYCCVHAAFAMRDDGYETIMVNCN 601

Query: 687  PETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHR 746
            PETVSTDYDTSDRLYFEP+T+EDVL + D E+P G+IVQFGGQTPLKL+          R
Sbjct: 602  PETVSTDYDTSDRLYFEPVTLEDVLEIADKEQPVGVIVQFGGQTPLKLA----------R 651

Query: 747  LPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEIG 806
               A+G   V I GT+PD+ID AEDRERF  +I +L ++QP    A+S  +A A A+ IG
Sbjct: 652  ELEAAG---VPIIGTTPDAIDRAEDRERFQQMIDKLGLKQPPNATARSFDEAFAKAEAIG 708

Query: 807  YPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALAD 866
            YP+VVRPSYVLGGRAMEIVY+ + L  Y+ +AV+V  + PVL+D +L+ AIEID+DA++D
Sbjct: 709  YPLVVRPSYVLGGRAMEIVYSADELENYMTHAVKVSNDSPVLLDHFLNAAIEIDIDAVSD 768

Query: 867  SCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNC 926
                VVIGGIM+HIEQAGVHSGDSAC +P  ++ +   D +     ++A  L V GLMN 
Sbjct: 769  G-HEVVIGGIMQHIEQAGVHSGDSACALPPYSLPAEVQDEMRDQVKRMAVELGVVGLMNV 827

Query: 927  QYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPKH 986
            Q A    G++Y++E NPRASRT PFVSK IG  LA+ AA  M+GKSL + GFT+E++P  
Sbjct: 828  QLA-WQDGEIYVIEVNPRASRTAPFVSKCIGTSLAQIAARCMAGKSLVEQGFTREIVPHF 886

Query: 987  VSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLP-LSG--T 1043
             SVKEAV PF KF G D +L PEM+STGEVMG   +F  AF KAQ+ AG+ +P L G   
Sbjct: 887  YSVKEAVFPFNKFPGVDPILSPEMKSTGEVMGSGETFAEAFYKAQLGAGEAIPKLEGERK 946

Query: 1044 VFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDM 1103
             FLS+ +  K  +  IA++ L +GF + +T GTA  LE  G+ VE V K++EGRPH  D+
Sbjct: 947  AFLSVREPDKAGVIEIARSLLGLGFTLCATRGTAAALEAAGLEVEVVNKVYEGRPHIVDL 1006

Query: 1104 VANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTVT 1163
            + N  I  +V T+ G      D   +RR  LA KVP  TT++GA A   A+     N +T
Sbjct: 1007 LKNDDIAYIVNTTEGRQAIN-DSSVIRRTALARKVPYATTLAGASAVCMALEY--GNEIT 1063

Query: 1164 MTALQDF 1170
            +  LQ+ 
Sbjct: 1064 VRRLQEL 1070


>gi|418787568|ref|ZP_13343369.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Newport str. CVM 19447]
 gi|418792673|ref|ZP_13348413.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Newport str. CVM 19449]
 gi|418796480|ref|ZP_13352172.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Newport str. CVM 19567]
 gi|392765825|gb|EJA22609.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Newport str. CVM 19447]
 gi|392766626|gb|EJA23399.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Newport str. CVM 19449]
 gi|392771349|gb|EJA28070.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Newport str. CVM 19567]
          Length = 1075

 Score = 1224 bits (3168), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 616/1078 (57%), Positives = 783/1078 (72%), Gaps = 19/1078 (1%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILILGAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  E+V +++EKERPDA+LPTMGGQTALN A+ L   G LE++GV +IGA  DA
Sbjct: 63   ATYIEPIHWEVVRKIIEKERPDAVLPTMGGQTALNCALELERQGVLEEFGVTMIGATADA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  F  AMK IG+ T  SGI +T++E +++A ++G FP IIRP+FT+GGTGGGI
Sbjct: 123  IDKAEDRRRFDIAMKKIGLDTARSGIAHTMEEALAVAADVG-FPCIIRPSFTMGGTGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEFE IC+ GL  S T+++L+++SL+GWKEYE+EV+RD  DN +I+CSIEN D MG
Sbjct: 182  AYNREEFEEICERGLDLSPTNELLIDESLIGWKEYEMEVVRDKNDNCIIVCSIENFDAMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            +HTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGVE GGSNVQFAVNP +G ++VIEMN
Sbjct: 242  IHTGDSITVAPAQTLTDKEYQIMRNASMAVLREIGVETGGSNVQFAVNPKNGRLIVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT  +TPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGYTLDELMNDITGGRTPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            F FEKF G+   LTTQMKSVGE MA+GRT QES QKALR LE G +G+      +     
Sbjct: 362  FNFEKFAGANDRLTTQMKSVGEVMAIGRTQQESLQKALRGLEVGATGFDPKVSLDDPEAL 421

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
             +++  L+    DR+  I  A + G+ VD +  L+ ID+WFL Q +EL+ +E+ +    +
Sbjct: 422  TKIRRELKDAGADRIWYIADAFRAGLSVDGVFNLTNIDRWFLVQIEELVRLEEKVAEVGI 481

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
            + +  D   ++KR+GF+D ++A      E E+R+ R    + P YKRVDTCAAEF  +T 
Sbjct: 482  TGLNADFLRQLKRKGFADARLAKLAGVREAEIRKLRDQYDLHPVYKRVDTCAAEFATDTA 541

Query: 627  YMYSSYDFECESAPT-QKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNS 685
            YMYS+Y+ ECE+ P+  + K+++LGGGPNRIGQGIEFDYCC H S +L+  GYETIM+N 
Sbjct: 542  YMYSTYEDECEANPSVDRDKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVNC 601

Query: 686  NPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEH 745
            NPETVSTDYDTSDRLYFEP+T+EDVL ++ +E+P+G+IVQ+GGQTPLKL+          
Sbjct: 602  NPETVSTDYDTSDRLYFEPVTLEDVLEIVRIEKPKGVIVQYGGQTPLKLA---------- 651

Query: 746  RLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEI 805
            R   A+G   V + GTSPD+ID AEDRERF   +  L ++QP      +   A+  AKEI
Sbjct: 652  RALEAAG---VPVIGTSPDAIDRAEDRERFQHAVDRLKLKQPANATVTAIEQAVEKAKEI 708

Query: 806  GYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALA 865
            GYP+VVRPSYVLGGRAMEIVY +  L  Y + AV V  + PVL+D++L DA+E+DVDA+ 
Sbjct: 709  GYPLVVRPSYVLGGRAMEIVYDEADLRRYFQTAVSVSNDAPVLLDRFLDDAVEVDVDAIC 768

Query: 866  DSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMN 925
            D    V+IGGIMEHIEQAGVHSGDSAC +P  T+S    D +     KLA  L V GLMN
Sbjct: 769  DG-EMVLIGGIMEHIEQAGVHSGDSACSLPAYTLSQEIQDVMRQQVQKLAFELQVRGLMN 827

Query: 926  CQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPK 985
             Q+A+  + +VYL+E NPRA+RTVPFVSK  G PLAK AA VM+GKSL + G T+E+IP 
Sbjct: 828  VQFAVKDN-EVYLIEVNPRAARTVPFVSKTTGVPLAKVAARVMAGKSLTEQGVTQEIIPP 886

Query: 986  HVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVF 1045
            + SVKE VLPF KF G D LLGPEMRSTGEVMG+  +F  AFAKAQ+ +   +   G   
Sbjct: 887  YYSVKEVVLPFNKFPGVDPLLGPEMRSTGEVMGVGRTFAEAFAKAQLGSNSTMKKQGRAL 946

Query: 1046 LSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVA 1105
            LS+ +  K  +  +A   L  GF++ +T GTA  L   GI    V K+HEGRPH  D + 
Sbjct: 947  LSVREGDKERVVDLAAKLLKQGFELDATHGTAIVLGEAGINPRLVNKVHEGRPHIQDRIK 1006

Query: 1106 NGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTVT 1163
            NG+   ++ T++G    + D   +RR  L YKV   TT++G  A   A+ +  +  VT
Sbjct: 1007 NGEYTYIINTTAGRRAIE-DSRVIRRSALQYKVHYDTTLNGGFATTMALNADATEKVT 1063


>gi|404373350|ref|ZP_10978613.1| carbamoyl-phosphate synthase large chain [Escherichia sp. 1_1_43]
 gi|226840555|gb|EEH72557.1| carbamoyl-phosphate synthase large chain [Escherichia sp. 1_1_43]
          Length = 1073

 Score = 1224 bits (3168), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 617/1071 (57%), Positives = 782/1071 (73%), Gaps = 19/1071 (1%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILILGAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  E+V +++EKERPDA+LPTMGGQTALN A+ L   G LE++GV +IGA  DA
Sbjct: 63   ATYIEPIHWEVVRKIIEKERPDAVLPTMGGQTALNCALELERQGVLEEFGVTMIGATADA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  F  AMK IG++T  SGI +T++E +++A ++G FP IIRP+FT+GG+GGGI
Sbjct: 123  IDKAEDRRRFDVAMKKIGLETARSGIAHTMEEALAVAADVG-FPCIIRPSFTMGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEFE IC  GL  S T ++L+++SL+GWKEYE+EV+RD  DN +I+CSIEN D MG
Sbjct: 182  AYNREEFEEICARGLDLSPTKELLIDESLIGWKEYEMEVVRDKNDNCIIVCSIENFDAMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            +HTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGVE GGSNVQFAVNP +G ++VIEMN
Sbjct: 242  IHTGDSITVAPAQTLTDKEYQIMRNASMAVLREIGVETGGSNVQFAVNPKNGRLIVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT  +TPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGYTLDELMNDITGGRTPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            F FEKF G+   LTTQMKSVGE MA+GRT QES QKALR LE G +G+      +     
Sbjct: 362  FNFEKFAGANDRLTTQMKSVGEVMAIGRTQQESLQKALRGLEVGATGFDPKVSLDDPEAL 421

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
             +++  L+    +R+  I  A + G+ VD +  L+ ID+WFL Q +EL+ +E+ +    +
Sbjct: 422  TKIRRELKDAGAERIWYIADAFRAGLSVDGVFNLTNIDRWFLVQIEELVRLEEKVAEVGI 481

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
            + +  +   ++KR+GF+D ++A      E E+R+ R    + P YKRVDTCAAEF  +T 
Sbjct: 482  TGLNAEFLRQLKRKGFADARLAKLVGVREAEIRKLRDQYDLHPVYKRVDTCAAEFATDTA 541

Query: 627  YMYSSYDFECESAP-TQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNS 685
            YMYS+Y+ ECE+ P T ++K+++LGGGPNRIGQGIEFDYCC H S +L+  GYETIM+N 
Sbjct: 542  YMYSTYEEECEANPSTDREKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVNC 601

Query: 686  NPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEH 745
            NPETVSTDYDTSDRLYFEP+T+EDVL ++ +E+P+G+IVQ+GGQTPLKL+          
Sbjct: 602  NPETVSTDYDTSDRLYFEPVTLEDVLEIVRIEKPKGVIVQYGGQTPLKLA---------- 651

Query: 746  RLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEI 805
            R   A+G   V + GTSPD+ID AEDRERF   ++ L ++QP      +   A+  AKEI
Sbjct: 652  RALEAAG---VPVIGTSPDAIDRAEDRERFQHAVERLKLKQPANATVTAIEMAVEKAKEI 708

Query: 806  GYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALA 865
            GYP+VVRPSYVLGGRAMEIVY +  L  Y + AV V  + PVL+D +L DA+E+DVDA+ 
Sbjct: 709  GYPLVVRPSYVLGGRAMEIVYDEADLRRYFQTAVSVSNDAPVLLDHFLDDAVEVDVDAIC 768

Query: 866  DSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMN 925
            D    V+IGGIMEHIEQAGVHSGDSAC +P  T+S    D +     KLA  L V GLMN
Sbjct: 769  DG-EMVLIGGIMEHIEQAGVHSGDSACSLPAYTLSQEIQDVMRQQVQKLAFELQVRGLMN 827

Query: 926  CQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPK 985
             Q+A+  + +VYL+E NPRA+RTVPFVSKA G PLAK AA VM+GKSL + G TKEVIP 
Sbjct: 828  VQFAVKNN-EVYLIEVNPRAARTVPFVSKATGVPLAKVAARVMAGKSLAEQGVTKEVIPP 886

Query: 986  HVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVF 1045
            + SVKE VLPF KF G D LLGPEMRSTGEVMG+  +F  AFAKAQ+ +   +   G   
Sbjct: 887  YYSVKEVVLPFNKFPGVDPLLGPEMRSTGEVMGVGRTFAEAFAKAQLGSNSTMKKHGRAL 946

Query: 1046 LSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVA 1105
            LS+ +  K  +  +A   L  GF++ +T GTA  L   GI    V K+HEGRPH  D + 
Sbjct: 947  LSVREGDKERVVDLAAKLLKQGFELDATHGTAIVLGEAGINPRLVNKVHEGRPHIQDRIK 1006

Query: 1106 NGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRS 1156
            NG+   ++ T+SG    + D   +RR  L YKV   TT++G  A A A+ +
Sbjct: 1007 NGEYTYIINTTSGRRAIE-DSRVIRRSALQYKVHYDTTLNGGFATAMALNA 1056


>gi|387605514|ref|YP_006094370.1| carbamoyl-phosphate synthase large subunit [Escherichia coli 042]
 gi|284919814|emb|CBG32869.1| carbamoyl-phosphate synthase large chain [Escherichia coli 042]
          Length = 1073

 Score = 1224 bits (3168), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 617/1071 (57%), Positives = 781/1071 (72%), Gaps = 19/1071 (1%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILILGAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  E+V +++EKERPDA+LPTMGGQTALN A+ L   G LE++GV +IGA  DA
Sbjct: 63   ATYIEPIHWEVVRKIIEKERPDAVLPTMGGQTALNCALELERQGVLEEFGVTMIGATADA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  F  AMK IG++T  SGI +T++E +++A ++G FP IIRP+FT+GG+GGGI
Sbjct: 123  IDKAEDRRRFDVAMKKIGLETARSGIAHTMEEALAVAADVG-FPCIIRPSFTMGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEFE IC  GL  S T ++L+++SL+GWKEYE+EV+RD  DN +I+CSIEN D MG
Sbjct: 182  AYNREEFEEICARGLDLSPTKELLIDESLIGWKEYEMEVVRDKNDNCIIVCSIENFDAMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            +HTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGVE GGSNVQFAVNP +G ++VIEMN
Sbjct: 242  IHTGDSITVAPAQTLTDKEYQIMRNASMAVLREIGVETGGSNVQFAVNPKNGRLIVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT  +TPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGYTLDELMNDITGGRTPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            F FEKF G+   LTTQMKSVGE MA+GRT QES QKALR LE G +G+      +     
Sbjct: 362  FNFEKFAGANDRLTTQMKSVGEVMAIGRTQQESLQKALRGLEVGATGFDPKVSLDDPEAL 421

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
             +++  L+    +R+  I  A + G+ VD +  L+ ID+WFL Q +EL+ +E+ +    +
Sbjct: 422  TKIRRELKDAGAERIWYIADAFRAGLSVDGVFNLTNIDRWFLVQIEELVRLEEKVAEVGI 481

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
            + +  D   ++KR+GF+D ++A      E E+R+ R    + P YKRVDTCAAEF  +T 
Sbjct: 482  TGLNADFLRQLKRKGFADARLAKLAGVREAEIRKLRDQYDLHPVYKRVDTCAAEFATDTA 541

Query: 627  YMYSSYDFECESAP-TQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNS 685
            YMYS+Y+ ECE+ P T ++K+++LGGGPNRIGQGIEFDYCC H S +L+  GYETIM+N 
Sbjct: 542  YMYSTYEEECEANPSTDREKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVNC 601

Query: 686  NPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEH 745
            NPETVSTDYD+SDRLYFEP+T+EDVL ++ +E+P+G+IVQ+GGQTPLKL+          
Sbjct: 602  NPETVSTDYDSSDRLYFEPVTLEDVLEIVRIEKPKGVIVQYGGQTPLKLA---------- 651

Query: 746  RLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEI 805
            R   A+G   V + GTSPD+ID AEDRERF   +  L ++QP      +   A+  AKEI
Sbjct: 652  RALEAAG---VPVIGTSPDAIDRAEDRERFQHAVDRLKLKQPANATVTAIEMAVEKAKEI 708

Query: 806  GYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALA 865
            GYP+VVRPSYVLGGRAMEIVY +  L  Y + AV V  + PVL+D +L DA+E+DVDA+ 
Sbjct: 709  GYPLVVRPSYVLGGRAMEIVYDEADLRRYFQTAVSVSNDAPVLLDHFLDDAVEVDVDAIC 768

Query: 866  DSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMN 925
            D    V+IGGIMEHIEQAGVHSGDSAC +P  T+S    D +     KLA  L V GLMN
Sbjct: 769  DG-EMVLIGGIMEHIEQAGVHSGDSACSLPAYTLSQEIQDVMRQQVQKLAFELQVRGLMN 827

Query: 926  CQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPK 985
             Q+A+  + +VYL+E NPRA+RTVPFVSKA G PLAK AA VM+GKSL + G TKEVIP 
Sbjct: 828  VQFAVKNN-EVYLIEVNPRAARTVPFVSKATGVPLAKVAARVMAGKSLAEQGVTKEVIPP 886

Query: 986  HVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVF 1045
            + SVKE VLPF KF G D LLGPEMRSTGEVMG+  +F  AFAKAQ+ +   +   G   
Sbjct: 887  YYSVKEVVLPFNKFPGVDPLLGPEMRSTGEVMGVGRTFAEAFAKAQLGSNSTMKKHGRAL 946

Query: 1046 LSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVA 1105
            LS+ +  K  +  +A   L  GF++ +T GTA  L   GI    V K+HEGRPH  D + 
Sbjct: 947  LSVREGDKERVVDLAAKLLKQGFELDATHGTAIVLGEAGINPRLVNKVHEGRPHIQDRIK 1006

Query: 1106 NGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRS 1156
            NG+   ++ T+SG    + D   +RR  L YKV   TT++G  A A A+ +
Sbjct: 1007 NGEYTYIINTTSGRRAIE-DSRVIRRSALQYKVHYDTTLNGGFATAMALNA 1056


>gi|218698453|ref|YP_002406082.1| carbamoyl phosphate synthase large subunit [Escherichia coli IAI39]
 gi|386622447|ref|YP_006142175.1| carbamoyl phosphate synthase large subunit [Escherichia coli O7:K1
            str. CE10]
 gi|432368029|ref|ZP_19611137.1| carbamoyl-phosphate synthase large chain [Escherichia coli KTE10]
 gi|218368439|emb|CAR16175.1| carbamoyl-phosphate synthase large subunit [Escherichia coli IAI39]
 gi|349736185|gb|AEQ10891.1| carbamoyl phosphate synthase large subunit [Escherichia coli O7:K1
            str. CE10]
 gi|430889690|gb|ELC12350.1| carbamoyl-phosphate synthase large chain [Escherichia coli KTE10]
          Length = 1073

 Score = 1224 bits (3168), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 617/1071 (57%), Positives = 782/1071 (73%), Gaps = 19/1071 (1%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILILGAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  E+V +++EKERPDA+LPTMGGQTALN A+ L   G LE++GV +IGA  DA
Sbjct: 63   ATYIEPIHWEVVRKIIEKERPDAVLPTMGGQTALNCALELERQGVLEEFGVTMIGATADA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  F  AMK IG++T  SGI +T++E +++A ++G FP IIRP+FT+GG+GGGI
Sbjct: 123  IDKAEDRRRFDVAMKKIGLETARSGIAHTMEEALAVAADVG-FPCIIRPSFTMGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEFE IC  GL  S T ++L+++SL+GWKEYE+EV+RD  DN +I+CSIEN D MG
Sbjct: 182  AYNREEFEEICARGLDLSPTKELLIDESLIGWKEYEMEVVRDKNDNCIIVCSIENFDAMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            +HTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGVE GGSNVQFAVNP +G ++VIEMN
Sbjct: 242  IHTGDSITVAPAQTLTDKEYQIMRNASMAVLREIGVETGGSNVQFAVNPKNGRLIVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT  +TPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGYTLDELMNDITGGRTPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            F FEKF G+   LTTQMKSVGE MA+GRT QES QKALR LE G +G+      +     
Sbjct: 362  FNFEKFAGANDRLTTQMKSVGEVMAIGRTQQESLQKALRGLEVGATGFDPKVSLDDPEAL 421

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
             +++  L+    +R+  I  A + G+ VD +  L+ ID+WFL Q +EL+ +E+ +    +
Sbjct: 422  TKIRRELKDAGAERIWYIADAFRAGLSVDGVFNLTNIDRWFLVQIEELVRLEEKVAEVGI 481

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
            + +  +   ++KR+GF+D ++A      E E+R+ R    + P YKRVDTCAAEF  +T 
Sbjct: 482  TGLNAEFLRQLKRKGFADARLAKLAGVREAEIRKLRDQYDLHPVYKRVDTCAAEFATDTA 541

Query: 627  YMYSSYDFECESAP-TQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNS 685
            YMYS+Y+ ECE+ P T ++K+++LGGGPNRIGQGIEFDYCC H S +L+  GYETIM+N 
Sbjct: 542  YMYSTYEEECEANPSTDREKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVNC 601

Query: 686  NPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEH 745
            NPETVSTDYDTSDRLYFEP+T+EDVL ++ +E+P+G+IVQ+GGQTPLKL+          
Sbjct: 602  NPETVSTDYDTSDRLYFEPVTLEDVLEIVRIEKPKGVIVQYGGQTPLKLA---------- 651

Query: 746  RLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEI 805
            R   A+G   V + GTSPD+ID AEDRERF   ++ L ++QP      +   A+  AKEI
Sbjct: 652  RALEAAG---VPVIGTSPDAIDRAEDRERFQHAVERLKLKQPANATVTTIEMAVEKAKEI 708

Query: 806  GYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALA 865
            GYP+VVRPSYVLGGRAMEIVY +  L  Y + AV V  + PVL+D +L DA+E+DVDA+ 
Sbjct: 709  GYPLVVRPSYVLGGRAMEIVYDEADLRRYFQTAVSVSNDAPVLLDHFLDDAVEVDVDAIC 768

Query: 866  DSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMN 925
            D    V+IGGIMEHIEQAGVHSGDSAC +P  T+S    D +     KLA  L V GLMN
Sbjct: 769  DG-EMVLIGGIMEHIEQAGVHSGDSACSLPAYTLSQEIQDVMRQQVQKLAFELQVRGLMN 827

Query: 926  CQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPK 985
             Q+A+  + +VYL+E NPRA+RTVPFVSKA G PLAK AA VM+GKSL + G TKEVIP 
Sbjct: 828  VQFAVKNN-EVYLIEVNPRAARTVPFVSKATGVPLAKVAARVMAGKSLAEQGVTKEVIPP 886

Query: 986  HVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVF 1045
            + SVKE VLPF KF G D LLGPEMRSTGEVMG+  +F  AFAKAQ+ +   +   G   
Sbjct: 887  YYSVKEVVLPFNKFPGVDPLLGPEMRSTGEVMGVGRTFAEAFAKAQLGSNSTMKKHGRAL 946

Query: 1046 LSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVA 1105
            LS+ +  K  +  +A   L  GF++ +T GTA  L   GI    V K+HEGRPH  D + 
Sbjct: 947  LSVREGDKERVVDLAAKLLKQGFELDATHGTAIVLGEAGINPRLVNKVHEGRPHIQDRIK 1006

Query: 1106 NGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRS 1156
            NG+   ++ T+SG    + D   +RR  L YKV   TT++G  A A A+ +
Sbjct: 1007 NGEYTYIINTTSGRRAIE-DSRVIRRSALQYKVHYDTTLNGGFATAMALNA 1056


>gi|385785847|ref|YP_005816956.1| carbamoyl phosphate synthase large subunit [Erwinia sp. Ejp617]
 gi|310765119|gb|ADP10069.1| carbamoyl phosphate synthase large subunit [Erwinia sp. Ejp617]
          Length = 1084

 Score = 1224 bits (3168), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 612/1077 (56%), Positives = 784/1077 (72%), Gaps = 19/1077 (1%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILILGAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  E+V +++EKERPDA+LPTMGGQTALN A+ L   G L ++GV +IGA  DA
Sbjct: 63   ATYIEPIHWEVVRKIIEKERPDAVLPTMGGQTALNCALELERQGVLAEFGVTMIGATADA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  F +AMK IG+ T  SGI +T++E +++A ++G FP IIRP+FT+GGTGGGI
Sbjct: 123  IDKAEDRQRFDKAMKKIGLDTARSGIAHTMEEALAVAADVG-FPCIIRPSFTMGGTGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEFE IC+ GL  S T+++L+++SL+GWKEYE+EV+RD  DN +I+CSIEN D MG
Sbjct: 182  AYNREEFEEICERGLDLSPTNELLIDESLIGWKEYEMEVVRDKNDNCIIVCSIENFDAMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            +HTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGVE GGSNVQF+VNP +G +++IEMN
Sbjct: 242  IHTGDSITVAPAQTLTDKEYQIMRNASMAVLREIGVETGGSNVQFSVNPENGRLIIIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKK-TPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT   TPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKIAAKLAVGYTLDELMNDITGGLTPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            F FEKF G+   LTTQMKSVGE MA+GRT QES QKALR LE G +G+            
Sbjct: 362  FNFEKFAGANDRLTTQMKSVGEVMAIGRTLQESMQKALRGLEVGANGFDPKVDLNDPEAL 421

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
              +++ L+    DR+  I  A + G+ V+++  L+ +D+WFL Q +EL+ +EQ +  Q V
Sbjct: 422  TTIRHELKDAGSDRIWYIADAFRAGLTVEDVFALTNVDRWFLVQIEELVRLEQQVAQQGV 481

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
            S +  D    +KR+GF+D +++      E E+R+ R    + P YKRVDTCAAEF  +T 
Sbjct: 482  SGLNCDFLRTLKRKGFADARLSALAGVPESEIRQLRAQYNLHPVYKRVDTCAAEFSTDTA 541

Query: 627  YMYSSYDFECESAPTQ-KKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNS 685
            YMYS+Y+ ECE+ P Q + K+++LGGGPNRIGQGIEFDYCC H S +L+  G+ETIM+N 
Sbjct: 542  YMYSTYEEECEANPNQDRDKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGFETIMVNC 601

Query: 686  NPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEH 745
            NPETVSTDYDTSDRLYFEP+T+EDVL ++ +E+P+G+IVQ+GGQTPLKL+          
Sbjct: 602  NPETVSTDYDTSDRLYFEPVTLEDVLEIVRIEKPKGVIVQYGGQTPLKLA---------- 651

Query: 746  RLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEI 805
            R   A+G   V + GTSPD+ID AEDRERF   ++ L ++QP      +   A+  A  I
Sbjct: 652  RALEAAG---VPVIGTSPDAIDRAEDRERFQQAVERLGLKQPANATVTAIDMAVEKAAMI 708

Query: 806  GYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALA 865
            GYP+VVRPSYVLGGRAMEIVY +  L  Y   AV V  + PVL+D++L DA+E+DVDA+ 
Sbjct: 709  GYPLVVRPSYVLGGRAMEIVYDEIDLKRYFNTAVSVSNDAPVLLDRFLDDAVEVDVDAIC 768

Query: 866  DSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMN 925
            D    V+IGGIMEHIEQAGVHSGDSAC +P  T+S+   + +     KLA  L V GLMN
Sbjct: 769  DG-EQVLIGGIMEHIEQAGVHSGDSACSLPAYTLSAEIQNVMRQQVEKLAFELGVRGLMN 827

Query: 926  CQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPK 985
             Q+A+  + +VYL+E NPRA+RTVPFVSKA G PLAK AA VM+GK+L   G TKE+IP 
Sbjct: 828  VQFAVKDN-EVYLIEVNPRAARTVPFVSKATGMPLAKVAARVMAGKTLAAQGVTKEIIPP 886

Query: 986  HVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVF 1045
            + SVKE VLPF KFQG D +LGPEMRSTGEVMG+  +F  AF KA + A   +  SG   
Sbjct: 887  YYSVKEVVLPFNKFQGVDPILGPEMRSTGEVMGVGRTFAEAFCKAMLGAQSNMKKSGRAL 946

Query: 1046 LSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVA 1105
            LS+ +  K  +  +A+     GF++ +T+GTA  L+  GI V  V K+HEGRPH  D + 
Sbjct: 947  LSVREGDKKRIVELARRLQAFGFELDATAGTASVLQAAGIDVRLVNKVHEGRPHIQDRLK 1006

Query: 1106 NGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTV 1162
            NG+   +V T++G    + D   +RR  L YKV   TT++G  A A ++ +  +  V
Sbjct: 1007 NGEYAYIVNTTAGRQAIE-DSKLIRRSALQYKVHYDTTLNGGFATATSLNASATGQV 1062


>gi|204927019|ref|ZP_03218221.1| carbamoyl-phosphate synthase, large subunit [Salmonella enterica
            subsp. enterica serovar Javiana str. GA_MM04042433]
 gi|452121632|ref|YP_007471880.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Javiana str. CFSAN001992]
 gi|204323684|gb|EDZ08879.1| carbamoyl-phosphate synthase, large subunit [Salmonella enterica
            subsp. enterica serovar Javiana str. GA_MM04042433]
 gi|451910636|gb|AGF82442.1| carbamoyl phosphate synthase large subunit [Salmonella enterica
            subsp. enterica serovar Javiana str. CFSAN001992]
          Length = 1075

 Score = 1224 bits (3168), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 616/1078 (57%), Positives = 785/1078 (72%), Gaps = 19/1078 (1%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILILGAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  E+V +++EKERPDA+LPTMGGQTALN A+ L   G LE++GV +IGA  DA
Sbjct: 63   ATYIEPIHWEVVRKIIEKERPDAVLPTMGGQTALNCALELERQGVLEEFGVTMIGATADA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  F  AMK IG+ T  SGI +T++E +++A ++G FP IIRP+FT+GGTGGGI
Sbjct: 123  IDKAEDRRRFDIAMKKIGLDTARSGIAHTMEEALAVAADVG-FPCIIRPSFTMGGTGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEFE IC+ GL  S T+++L+++SL+GWKEYE+EV+RD  DN +I+CSIEN D MG
Sbjct: 182  AYNREEFEEICERGLDLSPTNELLIDESLIGWKEYEMEVVRDKNDNCIIVCSIENFDAMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            +HTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGVE GGSNVQFAVNP +G ++VIEMN
Sbjct: 242  IHTGDSITVAPAQTLTDKEYQIMRNASMAVLREIGVETGGSNVQFAVNPKNGRLIVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT  +TPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGYTLDELMNDITGGRTPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            F FEKF G+   LTTQMKSVGE MA+GRT QES QKALR LE G +G+      +     
Sbjct: 362  FNFEKFAGANDRLTTQMKSVGEVMAIGRTQQESLQKALRGLEVGATGFDPKVSLDDPEAL 421

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
             +++  L+    +R+  I  A + G+ VD +  L+ ID+WFL Q +EL+ +E+ +    +
Sbjct: 422  TKIRRELKDAGAERIWYIADAFRAGLSVDGVFNLTNIDRWFLVQIEELVRLEEKVTEVGI 481

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
            + +  D   ++KR+GF+D ++A  +   E E+R+ R    + P YKRVDTCAAEF  +T 
Sbjct: 482  TGLDADFLRQLKRKGFADARLAALSGVREAEIRKLRDQYDLHPVYKRVDTCAAEFATDTA 541

Query: 627  YMYSSYDFECESAPT-QKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNS 685
            YMYS+Y+ ECE+ P+  + K+++LGGGPNRIGQGIEFDYCC H S +L+  GYETIM+N 
Sbjct: 542  YMYSTYEDECEANPSVDRDKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVNC 601

Query: 686  NPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEH 745
            NPETVSTDYDTSDRLYFEP+T+EDVL ++ +E+P+G+IVQ+GGQTPLKL+          
Sbjct: 602  NPETVSTDYDTSDRLYFEPVTLEDVLEIVRIEKPKGVIVQYGGQTPLKLA---------- 651

Query: 746  RLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEI 805
            R   A+G   V + GTSPD+ID AEDRERF   +  L ++QP      +   A+  AKEI
Sbjct: 652  RALEAAG---VPVIGTSPDAIDRAEDRERFQHAVDRLKLKQPANATVTAIEQAVEKAKEI 708

Query: 806  GYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALA 865
            GYP+VVRPSYVLGGRAMEIVY +  L  Y + AV V  + PVL+D++L DA+E+DVDA+ 
Sbjct: 709  GYPLVVRPSYVLGGRAMEIVYDEADLRRYFQTAVSVSNDAPVLLDRFLDDAVEVDVDAIC 768

Query: 866  DSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMN 925
            D    V+IGGIMEHIEQAGVHSGDSAC +P  T+S    D +     KLA  L V GLMN
Sbjct: 769  DG-EMVLIGGIMEHIEQAGVHSGDSACSLPAYTLSQEIQDVMRQQVQKLAFELQVRGLMN 827

Query: 926  CQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPK 985
             Q+A+  + +VYL+E NPRA+RTVPFVSKA G PLAK AA VM+GKSL + G T+E+IP 
Sbjct: 828  VQFAVKDN-EVYLIEVNPRAARTVPFVSKATGVPLAKVAARVMAGKSLTEQGVTQEIIPP 886

Query: 986  HVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVF 1045
            + SVKE VLPF KF G D LLGPEMRSTGEVMG+  +F  AFAKAQ+ +   +   G   
Sbjct: 887  YYSVKEVVLPFNKFPGVDPLLGPEMRSTGEVMGVGRTFAEAFAKAQLGSNSTMKKQGRAL 946

Query: 1046 LSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVA 1105
            LS+ +  K  +  +A   L  GF++ +T GTA  L   GI    V K+HEGRPH  D + 
Sbjct: 947  LSVREGDKERVVDLAAKLLKQGFELDATHGTAIVLGEAGINPRLVNKVHEGRPHIQDRIK 1006

Query: 1106 NGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTVT 1163
            NG+   ++ T++G    + D   +RR  L YKV   TT++G  A   A+ +  +  VT
Sbjct: 1007 NGEYTYIINTTAGRRAIE-DSRVIRRSALQYKVHYDTTLNGGFATTMALNADATEKVT 1063


>gi|432600544|ref|ZP_19836800.1| carbamoyl-phosphate synthase large chain [Escherichia coli KTE66]
 gi|431144583|gb|ELE46277.1| carbamoyl-phosphate synthase large chain [Escherichia coli KTE66]
          Length = 1073

 Score = 1224 bits (3168), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 617/1071 (57%), Positives = 781/1071 (72%), Gaps = 19/1071 (1%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILILGAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  E+V +++EKERPDA+LPTMGGQTALN A+ L   G LE++GV +IGA  DA
Sbjct: 63   ATYIEPIHWEVVRKIIEKERPDAVLPTMGGQTALNCALELERQGVLEEFGVTMIGATADA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  F  AMK IG++T  SGI +T++E +++A ++G FP IIRP+FT+GG+GGGI
Sbjct: 123  IDKAEDRRRFDVAMKKIGLETARSGIAHTMEEALAVAADVG-FPCIIRPSFTMGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEFE IC  GL  S T ++L+++SL+GWKEYE+EV+RD  DN +I+CSIEN D MG
Sbjct: 182  AYNREEFEEICARGLDLSPTKELLIDESLIGWKEYEMEVVRDKNDNCIIVCSIENFDAMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            +HTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGVE GGSNVQFAVNP +G ++VIEMN
Sbjct: 242  IHTGDSITVAPAQTLTDKEYQIMRNASMAVLREIGVETGGSNVQFAVNPKNGRLIVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT  +TPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGYTLDELMNDITGGRTPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            F FEKF G+   LTTQMKSVGE MA+GRT QES QKALR LE G +G+      +     
Sbjct: 362  FNFEKFAGANDRLTTQMKSVGEVMAIGRTQQESLQKALRGLEVGATGFDPKVSLDDPEAL 421

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
             +++  L+    +R+  I  A + G+ VD +  L+ ID+WFL Q +EL+ +E+ +    +
Sbjct: 422  TKIRRELKDAGAERIWYIADAFRAGLSVDGVFNLTNIDRWFLVQIEELVRLEEKVAEVGI 481

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
            + +  D   ++KR+GF+D ++A      E E+R+ R    + P YKRVDTCAAEF  +T 
Sbjct: 482  TGLNADFLRQLKRKGFADARLAKLAGVREAEIRKLRDQYDLHPVYKRVDTCAAEFATDTA 541

Query: 627  YMYSSYDFECESAP-TQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNS 685
            YMYS+Y+ ECE+ P T ++K+++LGGGPNRIGQGIEFDYCC H S +L+  GYETIM+N 
Sbjct: 542  YMYSTYEEECEANPSTDREKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVNC 601

Query: 686  NPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEH 745
            NPETVSTDYDTSDRLYFEP+T+EDVL ++ +E+P+G+IVQ+GGQTPLKL+          
Sbjct: 602  NPETVSTDYDTSDRLYFEPVTLEDVLEIVRIEKPKGVIVQYGGQTPLKLA---------- 651

Query: 746  RLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEI 805
            R   A+G   V + GTSPD+ID AEDRERF   +  L ++QP      +   A+  AKEI
Sbjct: 652  RALEAAG---VPVIGTSPDAIDRAEDRERFQHAVDRLKLKQPANATVTAIEMAVEKAKEI 708

Query: 806  GYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALA 865
            GYP+VVRPSYVLGGRAMEIVY +  L  Y + AV V  + PVL+D +L DA+E+DVDA+ 
Sbjct: 709  GYPLVVRPSYVLGGRAMEIVYDEADLRRYFQTAVSVSNDAPVLLDHFLDDAVEVDVDAIC 768

Query: 866  DSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMN 925
            D    V+IGGIMEHIEQAGVHSGDSAC +P  T+S    D +     KLA  L V GLMN
Sbjct: 769  DG-EMVLIGGIMEHIEQAGVHSGDSACSLPAYTLSQEIQDVMRQQVQKLAFELQVRGLMN 827

Query: 926  CQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPK 985
             Q+A+  + +VYL+E NPRA+RTVPFVSKA G PLAK AA VM+GK+L + G TKEVIP 
Sbjct: 828  VQFAVKNN-EVYLIEVNPRAARTVPFVSKATGVPLAKVAARVMAGKTLAEQGVTKEVIPP 886

Query: 986  HVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVF 1045
            + SVKE VLPF KF G D LLGPEMRSTGEVMG+  +F  AFAKAQ+ +   +   G   
Sbjct: 887  YYSVKEVVLPFNKFPGVDPLLGPEMRSTGEVMGVGRTFAEAFAKAQLGSNSTMKKHGRAL 946

Query: 1046 LSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVA 1105
            LS+ +  K  +  +A   L  GF++ +T GTA  L   GI    V K+HEGRPH  D + 
Sbjct: 947  LSVREGDKERVVDLAAKLLKQGFELDATHGTAIVLGEAGINPRLVNKVHEGRPHIQDRIK 1006

Query: 1106 NGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRS 1156
            NG+   ++ T+SG    + D   +RR  L YKV   TT++G  A A A+ +
Sbjct: 1007 NGEYTYIINTTSGRRAIE-DSRVIRRSALQYKVHYDTTLNGGFATAMALNA 1056


>gi|74310651|ref|YP_309070.1| carbamoyl phosphate synthase large subunit [Shigella sonnei Ss046]
 gi|82542649|ref|YP_406596.1| carbamoyl phosphate synthase large subunit [Shigella boydii Sb227]
 gi|157159012|ref|YP_001461202.1| carbamoyl phosphate synthase large subunit [Escherichia coli E24377A]
 gi|157159501|ref|YP_001456819.1| carbamoyl phosphate synthase large subunit [Escherichia coli HS]
 gi|191168899|ref|ZP_03030670.1| carbamoyl-phosphate synthase, large subunit [Escherichia coli B7A]
 gi|193066203|ref|ZP_03047256.1| carbamoyl-phosphate synthase, large subunit [Escherichia coli E22]
 gi|193070991|ref|ZP_03051920.1| carbamoyl-phosphate synthase, large subunit [Escherichia coli
            E110019]
 gi|194429873|ref|ZP_03062385.1| carbamoyl-phosphate synthase, large subunit [Escherichia coli B171]
 gi|194439699|ref|ZP_03071769.1| carbamoyl-phosphate synthase, large subunit [Escherichia coli 101-1]
 gi|209917224|ref|YP_002291308.1| carbamoyl phosphate synthase large subunit [Escherichia coli SE11]
 gi|218552617|ref|YP_002385530.1| carbamoyl phosphate synthase large subunit [Escherichia coli IAI1]
 gi|218693504|ref|YP_002401171.1| carbamoyl phosphate synthase large subunit [Escherichia coli 55989]
 gi|251783600|ref|YP_002997904.1| carB, subunit of carbamoyl phosphate synthetase [Escherichia coli
            BL21(DE3)]
 gi|253774934|ref|YP_003037765.1| carbamoyl phosphate synthase large subunit [Escherichia coli
            'BL21-Gold(DE3)pLysS AG']
 gi|254160159|ref|YP_003043267.1| carbamoyl phosphate synthase large subunit [Escherichia coli B str.
            REL606]
 gi|254286962|ref|YP_003052710.1| carbamoyl-phosphate synthase large subunit [Escherichia coli
            BL21(DE3)]
 gi|260842270|ref|YP_003220048.1| carbamoyl-phosphate synthase large subunit [Escherichia coli O103:H2
            str. 12009]
 gi|260853243|ref|YP_003227134.1| carbamoyl phosphate synthase large subunit [Escherichia coli O26:H11
            str. 11368]
 gi|293476696|ref|ZP_06665104.1| carbamoyl-phosphate synthase [Escherichia coli B088]
 gi|300816067|ref|ZP_07096290.1| carbamoyl-phosphate synthase, large subunit [Escherichia coli MS
            107-1]
 gi|300821963|ref|ZP_07102107.1| carbamoyl-phosphate synthase, large subunit [Escherichia coli MS
            119-7]
 gi|300905435|ref|ZP_07123202.1| carbamoyl-phosphate synthase, large subunit [Escherichia coli MS
            84-1]
 gi|300919583|ref|ZP_07136075.1| carbamoyl-phosphate synthase, large subunit [Escherichia coli MS
            115-1]
 gi|300924019|ref|ZP_07140019.1| carbamoyl-phosphate synthase, large subunit [Escherichia coli MS
            182-1]
 gi|300928670|ref|ZP_07144189.1| carbamoyl-phosphate synthase, large subunit [Escherichia coli MS
            187-1]
 gi|301305077|ref|ZP_07211178.1| carbamoyl-phosphate synthase, large subunit [Escherichia coli MS
            124-1]
 gi|307311514|ref|ZP_07591156.1| carbamoyl-phosphate synthase, large subunit [Escherichia coli W]
 gi|309797799|ref|ZP_07692183.1| carbamoyl-phosphate synthase, large subunit [Escherichia coli MS
            145-7]
 gi|331666266|ref|ZP_08367147.1| carbamoyl-phosphate synthase, large subunit [Escherichia coli TA271]
 gi|331680603|ref|ZP_08381262.1| carbamoyl-phosphate synthase, large subunit [Escherichia coli H591]
 gi|332281281|ref|ZP_08393694.1| carbamoyl-phosphate synthase large subunit [Shigella sp. D9]
 gi|378714624|ref|YP_005279517.1| carbamoyl-phosphate synthase large subunit [Escherichia coli KO11FL]
 gi|383176624|ref|YP_005454629.1| carbamoyl phosphate synthase large subunit [Shigella sonnei 53G]
 gi|386607341|ref|YP_006122827.1| carbamoyl-phosphate synthase large subunit [Escherichia coli W]
 gi|386698536|ref|YP_006162373.1| carbamoyl phosphate synthase large subunit [Escherichia coli KO11FL]
 gi|386707766|ref|YP_006171487.1| carbamoyl phosphate synthase large subunit [Escherichia coli W]
 gi|407467493|ref|YP_006786065.1| carbamoyl phosphate synthase large subunit [Escherichia coli O104:H4
            str. 2009EL-2071]
 gi|407483791|ref|YP_006780940.1| carbamoyl phosphate synthase large subunit [Escherichia coli O104:H4
            str. 2011C-3493]
 gi|410484331|ref|YP_006771877.1| carbamoyl phosphate synthase large subunit [Escherichia coli O104:H4
            str. 2009EL-2050]
 gi|414574211|ref|ZP_11431426.1| carbamoyl-phosphate synthase large chain [Shigella sonnei 3233-85]
 gi|415781054|ref|ZP_11490824.1| carbamoyl-phosphate synthase large chain [Escherichia coli EPECa14]
 gi|415802150|ref|ZP_11499965.1| carbamoyl-phosphate synthase large chain [Escherichia coli E128010]
 gi|415814050|ref|ZP_11505713.1| carbamoyl-phosphate synthase large chain [Escherichia coli LT-68]
 gi|415832365|ref|ZP_11517818.1| carbamoyl-phosphate synthase large chain [Escherichia coli OK1357]
 gi|415849741|ref|ZP_11526847.1| carbamoyl-phosphate synthase large chain [Shigella sonnei 53G]
 gi|415863270|ref|ZP_11536561.1| carbamoyl-phosphate synthase, large subunit [Escherichia coli MS
            85-1]
 gi|415873133|ref|ZP_11540411.1| carbamoyl-phosphate synthase, large subunit [Escherichia coli MS
            79-10]
 gi|416295743|ref|ZP_11651251.1| Carbamoyl-phosphate synthase large chain [Shigella flexneri CDC
            796-83]
 gi|416343069|ref|ZP_11677073.1| Carbamoyl-phosphate synthase large chain [Escherichia coli EC4100B]
 gi|417151686|ref|ZP_11991213.1| carbamoyl-phosphate synthase, large subunit [Escherichia coli 1.2264]
 gi|417157314|ref|ZP_11994938.1| carbamoyl-phosphate synthase, large subunit [Escherichia coli
            96.0497]
 gi|417174147|ref|ZP_12003943.1| carbamoyl-phosphate synthase, large subunit [Escherichia coli 3.2608]
 gi|417182025|ref|ZP_12008861.1| carbamoyl-phosphate synthase, large subunit [Escherichia coli
            93.0624]
 gi|417245719|ref|ZP_12039247.1| carbamoyl-phosphate synthase, large subunit [Escherichia coli 9.0111]
 gi|417253506|ref|ZP_12045265.1| carbamoyl-phosphate synthase, large subunit [Escherichia coli 4.0967]
 gi|417268627|ref|ZP_12055987.1| carbamoyl-phosphate synthase, large subunit [Escherichia coli 3.3884]
 gi|417295386|ref|ZP_12082639.1| carbamoyl-phosphate synthase, large subunit [Escherichia coli 900105
            (10e)]
 gi|417584099|ref|ZP_12234893.1| carbamoyl-phosphate synthase large chain [Escherichia coli STEC_B2F1]
 gi|417605955|ref|ZP_12256489.1| carbamoyl-phosphate synthase large chain [Escherichia coli
            STEC_DG131-3]
 gi|417626758|ref|ZP_12277039.1| carbamoyl-phosphate synthase large chain [Escherichia coli
            STEC_H.1.8]
 gi|417631946|ref|ZP_12282172.1| carbamoyl-phosphate synthase large chain [Escherichia coli
            STEC_MHI813]
 gi|417642548|ref|ZP_12292667.1| carbamoyl-phosphate synthase large chain [Escherichia coli TX1999]
 gi|417670163|ref|ZP_12319692.1| carbamoyl-phosphate synthase large chain [Escherichia coli STEC_O31]
 gi|417684279|ref|ZP_12333620.1| carbamoyl-phosphate synthase large chain [Shigella boydii 3594-74]
 gi|417803373|ref|ZP_12450413.1| carbamoyl phosphate synthase large subunit [Escherichia coli O104:H4
            str. LB226692]
 gi|417831131|ref|ZP_12477661.1| carbamoyl phosphate synthase large subunit [Escherichia coli O104:H4
            str. 01-09591]
 gi|417864444|ref|ZP_12509490.1| hypothetical protein C22711_1377 [Escherichia coli O104:H4 str.
            C227-11]
 gi|418039683|ref|ZP_12677940.1| carbamoyl-phosphate synthase, large subunit [Escherichia coli W26]
 gi|418261443|ref|ZP_12883437.1| carB [Shigella sonnei str. Moseley]
 gi|419173559|ref|ZP_13717421.1| carB [Escherichia coli DEC7B]
 gi|419179048|ref|ZP_13722675.1| carB [Escherichia coli DEC7C]
 gi|419184506|ref|ZP_13728032.1| carB [Escherichia coli DEC7D]
 gi|419189769|ref|ZP_13733242.1| carbamoyl-phosphate synthase large chain [Escherichia coli DEC7E]
 gi|419206971|ref|ZP_13750102.1| carB [Escherichia coli DEC8C]
 gi|419213398|ref|ZP_13756433.1| carB [Escherichia coli DEC8D]
 gi|419224665|ref|ZP_13767561.1| carB [Escherichia coli DEC9A]
 gi|419235660|ref|ZP_13778416.1| carB [Escherichia coli DEC9B]
 gi|419235832|ref|ZP_13778586.1| carB [Escherichia coli DEC9C]
 gi|419246754|ref|ZP_13789377.1| carB [Escherichia coli DEC9D]
 gi|419246824|ref|ZP_13789444.1| carB [Escherichia coli DEC9E]
 gi|419252660|ref|ZP_13795212.1| carB [Escherichia coli DEC10A]
 gi|419258604|ref|ZP_13801068.1| carB [Escherichia coli DEC10B]
 gi|419264727|ref|ZP_13807117.1| carB [Escherichia coli DEC10C]
 gi|419275965|ref|ZP_13818243.1| carB [Escherichia coli DEC10D]
 gi|419276129|ref|ZP_13818402.1| carB [Escherichia coli DEC10E]
 gi|419281656|ref|ZP_13823881.1| carB [Escherichia coli DEC10F]
 gi|419292700|ref|ZP_13834778.1| carB [Escherichia coli DEC11A]
 gi|419298019|ref|ZP_13840047.1| carB [Escherichia coli DEC11B]
 gi|419298212|ref|ZP_13840238.1| carbamoyl-phosphate synthase large chain [Escherichia coli DEC11C]
 gi|419309571|ref|ZP_13851451.1| carbamoyl-phosphate synthase large chain [Escherichia coli DEC11E]
 gi|419314867|ref|ZP_13856700.1| carbamoyl-phosphate synthase large chain [Escherichia coli DEC12A]
 gi|419320666|ref|ZP_13862412.1| carB [Escherichia coli DEC12B]
 gi|419326843|ref|ZP_13868481.1| carbamoyl-phosphate synthase large chain [Escherichia coli DEC12C]
 gi|419332282|ref|ZP_13873850.1| carB [Escherichia coli DEC12D]
 gi|419338036|ref|ZP_13879528.1| carB [Escherichia coli DEC12E]
 gi|419343688|ref|ZP_13885075.1| carB [Escherichia coli DEC13A]
 gi|419348114|ref|ZP_13889470.1| carB [Escherichia coli DEC13B]
 gi|419353014|ref|ZP_13894303.1| carB [Escherichia coli DEC13C]
 gi|419358360|ref|ZP_13899593.1| carB [Escherichia coli DEC13D]
 gi|419363354|ref|ZP_13904539.1| carB [Escherichia coli DEC13E]
 gi|419368303|ref|ZP_13909438.1| carbamoyl-phosphate synthase large chain [Escherichia coli DEC14A]
 gi|419373456|ref|ZP_13914519.1| carB [Escherichia coli DEC14B]
 gi|419378885|ref|ZP_13919869.1| carB [Escherichia coli DEC14C]
 gi|419389330|ref|ZP_13930181.1| carB [Escherichia coli DEC14D]
 gi|419389438|ref|ZP_13930282.1| carB [Escherichia coli DEC15A]
 gi|419399934|ref|ZP_13940688.1| carB [Escherichia coli DEC15B]
 gi|419405177|ref|ZP_13945888.1| carB [Escherichia coli DEC15C]
 gi|419410336|ref|ZP_13951015.1| carB [Escherichia coli DEC15D]
 gi|419410650|ref|ZP_13951327.1| carB [Escherichia coli DEC15E]
 gi|419806314|ref|ZP_14331425.1| carbamoyl-phosphate synthase, large subunit [Escherichia coli AI27]
 gi|419868508|ref|ZP_14390778.1| carbamoyl phosphate synthase large subunit [Escherichia coli O103:H2
            str. CVM9450]
 gi|419873251|ref|ZP_14395243.1| carbamoyl phosphate synthase large subunit [Escherichia coli O111:H11
            str. CVM9534]
 gi|419882191|ref|ZP_14403445.1| carbamoyl phosphate synthase large subunit [Escherichia coli O111:H11
            str. CVM9545]
 gi|419898906|ref|ZP_14418442.1| carbamoyl phosphate synthase large subunit [Escherichia coli O26:H11
            str. CVM9942]
 gi|419905240|ref|ZP_14424208.1| hypothetical protein ECO10026_28749 [Escherichia coli O26:H11 str.
            CVM10026]
 gi|419929502|ref|ZP_14447175.1| carbamoyl phosphate synthase large subunit [Escherichia coli 541-1]
 gi|419951356|ref|ZP_14467549.1| carbamoyl phosphate synthase large subunit [Escherichia coli CUMT8]
 gi|420100127|ref|ZP_14611318.1| carbamoyl phosphate synthase large subunit [Escherichia coli O111:H11
            str. CVM9455]
 gi|420107224|ref|ZP_14617579.1| carbamoyl phosphate synthase large subunit [Escherichia coli O111:H11
            str. CVM9553]
 gi|420115017|ref|ZP_14624605.1| carbamoyl phosphate synthase large subunit [Escherichia coli O26:H11
            str. CVM10021]
 gi|420120308|ref|ZP_14629518.1| carbamoyl phosphate synthase large subunit [Escherichia coli O26:H11
            str. CVM10030]
 gi|420128258|ref|ZP_14636817.1| carbamoyl-phosphate synthase large subunit [Escherichia coli O26:H11
            str. CVM10224]
 gi|420132493|ref|ZP_14640840.1| carbamoyl phosphate synthase large subunit [Escherichia coli O26:H11
            str. CVM9952]
 gi|420323696|ref|ZP_14825487.1| carbamoyl-phosphate synthase large chain [Shigella flexneri CCH060]
 gi|420350913|ref|ZP_14852116.1| carbamoyl-phosphate synthase large chain [Shigella boydii 4444-74]
 gi|420361600|ref|ZP_14862534.1| carB [Shigella sonnei 4822-66]
 gi|420378309|ref|ZP_14877814.1| carbamoyl-phosphate synthase large chain [Shigella dysenteriae
            225-75]
 gi|420383664|ref|ZP_14883057.1| carbamoyl-phosphate synthase large chain [Escherichia coli EPECa12]
 gi|420389358|ref|ZP_14888632.1| carB [Escherichia coli EPEC C342-62]
 gi|421680765|ref|ZP_16120608.1| carB [Shigella flexneri 1485-80]
 gi|422354338|ref|ZP_16435080.1| carbamoyl-phosphate synthase, large subunit [Escherichia coli MS
            117-3]
 gi|422776673|ref|ZP_16830327.1| carbamoyl-phosphate synthase [Escherichia coli H120]
 gi|422788273|ref|ZP_16841010.1| carbamoyl-phosphate synthase [Escherichia coli H489]
 gi|422792684|ref|ZP_16845383.1| carbamoyl-phosphate synthase [Escherichia coli TA007]
 gi|422957624|ref|ZP_16969838.1| carbamoyl-phosphate synthase large chain [Escherichia coli H494]
 gi|422990741|ref|ZP_16981512.1| carbamoyl-phosphate synthase large chain [Escherichia coli O104:H4
            str. C227-11]
 gi|422992681|ref|ZP_16983445.1| carbamoyl-phosphate synthase large chain [Escherichia coli O104:H4
            str. C236-11]
 gi|422997890|ref|ZP_16988646.1| carbamoyl-phosphate synthase large chain [Escherichia coli O104:H4
            str. 09-7901]
 gi|423006373|ref|ZP_16997117.1| carbamoyl-phosphate synthase large chain [Escherichia coli O104:H4
            str. 04-8351]
 gi|423007996|ref|ZP_16998734.1| carbamoyl-phosphate synthase large chain [Escherichia coli O104:H4
            str. 11-3677]
 gi|423022182|ref|ZP_17012885.1| carbamoyl-phosphate synthase large chain [Escherichia coli O104:H4
            str. 11-4404]
 gi|423027337|ref|ZP_17018030.1| carbamoyl-phosphate synthase large chain [Escherichia coli O104:H4
            str. 11-4522]
 gi|423033174|ref|ZP_17023858.1| carbamoyl-phosphate synthase large chain [Escherichia coli O104:H4
            str. 11-4623]
 gi|423036040|ref|ZP_17026714.1| carbamoyl-phosphate synthase large chain [Escherichia coli O104:H4
            str. 11-4632 C1]
 gi|423041160|ref|ZP_17031827.1| carbamoyl-phosphate synthase large chain [Escherichia coli O104:H4
            str. 11-4632 C2]
 gi|423047846|ref|ZP_17038503.1| carbamoyl-phosphate synthase large chain [Escherichia coli O104:H4
            str. 11-4632 C3]
 gi|423056384|ref|ZP_17045189.1| carbamoyl-phosphate synthase large chain [Escherichia coli O104:H4
            str. 11-4632 C4]
 gi|423058395|ref|ZP_17047191.1| carbamoyl-phosphate synthase large chain [Escherichia coli O104:H4
            str. 11-4632 C5]
 gi|424748156|ref|ZP_18176305.1| carbamoyl-phosphate synthase large subunit [Escherichia coli O26:H11
            str. CFSAN001629]
 gi|424764802|ref|ZP_18192219.1| carbamoyl-phosphate synthase large subunit [Escherichia coli O111:H11
            str. CFSAN001630]
 gi|425286541|ref|ZP_18677495.1| carbamoyl-phosphate synthase large chain [Escherichia coli 3006]
 gi|425376761|ref|ZP_18761195.1| carbamoyl-phosphate synthase large chain [Escherichia coli EC1865]
 gi|425420630|ref|ZP_18801874.1| carbamoyl-phosphate synthase large chain [Escherichia coli 0.1288]
 gi|427807709|ref|ZP_18974774.1| carbamoyl-phosphate synthase large subunit [Escherichia coli]
 gi|429722239|ref|ZP_19257138.1| carbamoyl-phosphate synthase large chain [Escherichia coli O104:H4
            str. Ec11-9450]
 gi|429774317|ref|ZP_19306321.1| carbamoyl-phosphate synthase large chain [Escherichia coli O104:H4
            str. 11-02030]
 gi|429779577|ref|ZP_19311533.1| carbamoyl-phosphate synthase large chain [Escherichia coli O104:H4
            str. 11-02033-1]
 gi|429783632|ref|ZP_19315546.1| carbamoyl-phosphate synthase large chain [Escherichia coli O104:H4
            str. 11-02092]
 gi|429788970|ref|ZP_19320846.1| carbamoyl-phosphate synthase large chain [Escherichia coli O104:H4
            str. 11-02093]
 gi|429795200|ref|ZP_19327027.1| carbamoyl-phosphate synthase large chain [Escherichia coli O104:H4
            str. 11-02281]
 gi|429801126|ref|ZP_19332905.1| carbamoyl-phosphate synthase large chain [Escherichia coli O104:H4
            str. 11-02318]
 gi|429804758|ref|ZP_19336506.1| carbamoyl-phosphate synthase large chain [Escherichia coli O104:H4
            str. 11-02913]
 gi|429809569|ref|ZP_19341272.1| carbamoyl-phosphate synthase large chain [Escherichia coli O104:H4
            str. 11-03439]
 gi|429815329|ref|ZP_19346989.1| carbamoyl-phosphate synthase large chain [Escherichia coli O104:H4
            str. 11-04080]
 gi|429820540|ref|ZP_19352155.1| carbamoyl-phosphate synthase large chain [Escherichia coli O104:H4
            str. 11-03943]
 gi|429906591|ref|ZP_19372561.1| carbamoyl-phosphate synthase large chain [Escherichia coli O104:H4
            str. Ec11-9990]
 gi|429910786|ref|ZP_19376743.1| carbamoyl-phosphate synthase large chain [Escherichia coli O104:H4
            str. Ec11-9941]
 gi|429916626|ref|ZP_19382567.1| carbamoyl-phosphate synthase large chain [Escherichia coli O104:H4
            str. Ec11-4984]
 gi|429921664|ref|ZP_19387586.1| carbamoyl-phosphate synthase large chain [Escherichia coli O104:H4
            str. Ec11-5604]
 gi|429927481|ref|ZP_19393388.1| carbamoyl-phosphate synthase large chain [Escherichia coli O104:H4
            str. Ec11-4986]
 gi|429931414|ref|ZP_19397310.1| carbamoyl-phosphate synthase large chain [Escherichia coli O104:H4
            str. Ec11-4987]
 gi|429937957|ref|ZP_19403838.1| carbamoyl-phosphate synthase large chain [Escherichia coli O104:H4
            str. Ec11-4988]
 gi|429938672|ref|ZP_19404546.1| carbamoyl-phosphate synthase large chain [Escherichia coli O104:H4
            str. Ec11-5603]
 gi|429946313|ref|ZP_19412169.1| carbamoyl-phosphate synthase large chain [Escherichia coli O104:H4
            str. Ec11-6006]
 gi|429948961|ref|ZP_19414809.1| carbamoyl-phosphate synthase large chain [Escherichia coli O104:H4
            str. Ec12-0465]
 gi|429957228|ref|ZP_19423057.1| carbamoyl-phosphate synthase large chain [Escherichia coli O104:H4
            str. Ec12-0466]
 gi|432379653|ref|ZP_19622628.1| carbamoyl-phosphate synthase large chain [Escherichia coli KTE12]
 gi|432479362|ref|ZP_19721328.1| carbamoyl-phosphate synthase large chain [Escherichia coli KTE210]
 gi|432483677|ref|ZP_19725606.1| carbamoyl-phosphate synthase large chain [Escherichia coli KTE212]
 gi|432532245|ref|ZP_19769255.1| carbamoyl-phosphate synthase large chain [Escherichia coli KTE234]
 gi|432677613|ref|ZP_19913044.1| carbamoyl-phosphate synthase large chain [Escherichia coli KTE142]
 gi|432763320|ref|ZP_19997777.1| carbamoyl-phosphate synthase large chain [Escherichia coli KTE48]
 gi|432808671|ref|ZP_20042581.1| carbamoyl-phosphate synthase large chain [Escherichia coli KTE91]
 gi|432812183|ref|ZP_20046033.1| carbamoyl-phosphate synthase large chain [Escherichia coli KTE101]
 gi|432830013|ref|ZP_20063623.1| carbamoyl-phosphate synthase large chain [Escherichia coli KTE135]
 gi|432833138|ref|ZP_20066687.1| carbamoyl-phosphate synthase large chain [Escherichia coli KTE136]
 gi|432932298|ref|ZP_20132200.1| carbamoyl-phosphate synthase large chain [Escherichia coli KTE184]
 gi|432966179|ref|ZP_20155099.1| carbamoyl-phosphate synthase large chain [Escherichia coli KTE203]
 gi|433090383|ref|ZP_20276696.1| carbamoyl-phosphate synthase large chain [Escherichia coli KTE138]
 gi|433128323|ref|ZP_20313812.1| carbamoyl-phosphate synthase large chain [Escherichia coli KTE163]
 gi|433133224|ref|ZP_20318611.1| carbamoyl-phosphate synthase large chain [Escherichia coli KTE166]
 gi|433171801|ref|ZP_20356371.1| carbamoyl-phosphate synthase large chain [Escherichia coli KTE232]
 gi|433191827|ref|ZP_20375860.1| carbamoyl-phosphate synthase large chain [Escherichia coli KTE90]
 gi|442597952|ref|ZP_21015730.1| Carbamoyl-phosphate synthase large chain [Escherichia coli
            O5:K4(L):H4 str. ATCC 23502]
 gi|443616050|ref|YP_007379906.1| carbamoyl phosphate synthase large subunit [Escherichia coli APEC
            O78]
 gi|450208897|ref|ZP_21893825.1| carbamoyl-phosphate synthase large subunit [Escherichia coli O08]
 gi|73854128|gb|AAZ86835.1| carbamoyl-phosphate synthase large subunit [Shigella sonnei Ss046]
 gi|81244060|gb|ABB64768.1| carbamoyl-phosphate synthase large subunit [Shigella boydii Sb227]
 gi|157065181|gb|ABV04436.1| carbamoyl-phosphate synthase, large subunit [Escherichia coli HS]
 gi|157081042|gb|ABV20750.1| carbamoyl-phosphate synthase, large subunit [Escherichia coli
            E24377A]
 gi|190901065|gb|EDV60843.1| carbamoyl-phosphate synthase, large subunit [Escherichia coli B7A]
 gi|192926128|gb|EDV80769.1| carbamoyl-phosphate synthase, large subunit [Escherichia coli E22]
 gi|192955721|gb|EDV86195.1| carbamoyl-phosphate synthase, large subunit [Escherichia coli
            E110019]
 gi|194412092|gb|EDX28402.1| carbamoyl-phosphate synthase, large subunit [Escherichia coli B171]
 gi|194421384|gb|EDX37401.1| carbamoyl-phosphate synthase, large subunit [Escherichia coli 101-1]
 gi|209910483|dbj|BAG75557.1| carbamoyl-phosphate synthase large subunit [Escherichia coli SE11]
 gi|218350236|emb|CAU95919.1| carbamoyl-phosphate synthase large subunit [Escherichia coli 55989]
 gi|218359385|emb|CAQ96924.1| carbamoyl-phosphate synthase large subunit [Escherichia coli IAI1]
 gi|242375873|emb|CAQ30553.1| carB, subunit of carbamoyl phosphate synthetase [Escherichia coli
            BL21(DE3)]
 gi|253325978|gb|ACT30580.1| carbamoyl-phosphate synthase, large subunit [Escherichia coli
            'BL21-Gold(DE3)pLysS AG']
 gi|253972060|gb|ACT37731.1| carbamoyl-phosphate synthase large subunit [Escherichia coli B str.
            REL606]
 gi|253976269|gb|ACT41939.1| carbamoyl-phosphate synthase large subunit [Escherichia coli
            BL21(DE3)]
 gi|257751892|dbj|BAI23394.1| carbamoyl-phosphate synthase large subunit [Escherichia coli O26:H11
            str. 11368]
 gi|257757417|dbj|BAI28914.1| carbamoyl-phosphate synthase large subunit [Escherichia coli O103:H2
            str. 12009]
 gi|291321149|gb|EFE60591.1| carbamoyl-phosphate synthase [Escherichia coli B088]
 gi|300402713|gb|EFJ86251.1| carbamoyl-phosphate synthase, large subunit [Escherichia coli MS
            84-1]
 gi|300413329|gb|EFJ96639.1| carbamoyl-phosphate synthase, large subunit [Escherichia coli MS
            115-1]
 gi|300419743|gb|EFK03054.1| carbamoyl-phosphate synthase, large subunit [Escherichia coli MS
            182-1]
 gi|300463339|gb|EFK26832.1| carbamoyl-phosphate synthase, large subunit [Escherichia coli MS
            187-1]
 gi|300525563|gb|EFK46632.1| carbamoyl-phosphate synthase, large subunit [Escherichia coli MS
            119-7]
 gi|300531274|gb|EFK52336.1| carbamoyl-phosphate synthase, large subunit [Escherichia coli MS
            107-1]
 gi|300839684|gb|EFK67444.1| carbamoyl-phosphate synthase, large subunit [Escherichia coli MS
            124-1]
 gi|306908493|gb|EFN38991.1| carbamoyl-phosphate synthase, large subunit [Escherichia coli W]
 gi|308118628|gb|EFO55890.1| carbamoyl-phosphate synthase, large subunit [Escherichia coli MS
            145-7]
 gi|315059258|gb|ADT73585.1| carbamoyl-phosphate synthase large subunit [Escherichia coli W]
 gi|315255693|gb|EFU35661.1| carbamoyl-phosphate synthase, large subunit [Escherichia coli MS
            85-1]
 gi|320186145|gb|EFW60887.1| Carbamoyl-phosphate synthase large chain [Shigella flexneri CDC
            796-83]
 gi|320200450|gb|EFW75036.1| Carbamoyl-phosphate synthase large chain [Escherichia coli EC4100B]
 gi|323157908|gb|EFZ44011.1| carbamoyl-phosphate synthase large chain [Escherichia coli EPECa14]
 gi|323160049|gb|EFZ46012.1| carbamoyl-phosphate synthase large chain [Escherichia coli E128010]
 gi|323166081|gb|EFZ51860.1| carbamoyl-phosphate synthase large chain [Shigella sonnei 53G]
 gi|323171452|gb|EFZ57099.1| carbamoyl-phosphate synthase large chain [Escherichia coli LT-68]
 gi|323181729|gb|EFZ67142.1| carbamoyl-phosphate synthase large chain [Escherichia coli OK1357]
 gi|323380185|gb|ADX52453.1| carbamoyl-phosphate synthase, large subunit [Escherichia coli KO11FL]
 gi|323945770|gb|EGB41817.1| carbamoyl-phosphate synthase [Escherichia coli H120]
 gi|323959981|gb|EGB55627.1| carbamoyl-phosphate synthase [Escherichia coli H489]
 gi|323970706|gb|EGB65960.1| carbamoyl-phosphate synthase [Escherichia coli TA007]
 gi|324017700|gb|EGB86919.1| carbamoyl-phosphate synthase, large subunit [Escherichia coli MS
            117-3]
 gi|331066477|gb|EGI38354.1| carbamoyl-phosphate synthase, large subunit [Escherichia coli TA271]
 gi|331072066|gb|EGI43402.1| carbamoyl-phosphate synthase, large subunit [Escherichia coli H591]
 gi|332090537|gb|EGI95635.1| carbamoyl-phosphate synthase large chain [Shigella boydii 3594-74]
 gi|332103633|gb|EGJ06979.1| carbamoyl-phosphate synthase large subunit [Shigella sp. D9]
 gi|340736205|gb|EGR65253.1| carbamoyl phosphate synthase large subunit [Escherichia coli O104:H4
            str. 01-09591]
 gi|340741919|gb|EGR76060.1| carbamoyl phosphate synthase large subunit [Escherichia coli O104:H4
            str. LB226692]
 gi|341917733|gb|EGT67348.1| hypothetical protein C22711_1377 [Escherichia coli O104:H4 str.
            C227-11]
 gi|342931170|gb|EGU99892.1| carbamoyl-phosphate synthase, large subunit [Escherichia coli MS
            79-10]
 gi|345332330|gb|EGW64788.1| carbamoyl-phosphate synthase large chain [Escherichia coli STEC_B2F1]
 gi|345366809|gb|EGW98898.1| carbamoyl-phosphate synthase large chain [Escherichia coli
            STEC_DG131-3]
 gi|345368097|gb|EGX00104.1| carbamoyl-phosphate synthase large chain [Escherichia coli
            STEC_MHI813]
 gi|345369265|gb|EGX01253.1| carbamoyl-phosphate synthase large chain [Escherichia coli
            STEC_H.1.8]
 gi|345388730|gb|EGX18540.1| carbamoyl-phosphate synthase large chain [Escherichia coli TX1999]
 gi|354859239|gb|EHF19687.1| carbamoyl-phosphate synthase large chain [Escherichia coli O104:H4
            str. 04-8351]
 gi|354859727|gb|EHF20174.1| carbamoyl-phosphate synthase large chain [Escherichia coli O104:H4
            str. C227-11]
 gi|354866424|gb|EHF26847.1| carbamoyl-phosphate synthase large chain [Escherichia coli O104:H4
            str. C236-11]
 gi|354876758|gb|EHF37118.1| carbamoyl-phosphate synthase large chain [Escherichia coli O104:H4
            str. 09-7901]
 gi|354881767|gb|EHF42095.1| carbamoyl-phosphate synthase large chain [Escherichia coli O104:H4
            str. 11-4404]
 gi|354884865|gb|EHF45176.1| carbamoyl-phosphate synthase large chain [Escherichia coli O104:H4
            str. 11-3677]
 gi|354886312|gb|EHF46599.1| carbamoyl-phosphate synthase large chain [Escherichia coli O104:H4
            str. 11-4522]
 gi|354889828|gb|EHF50075.1| carbamoyl-phosphate synthase large chain [Escherichia coli O104:H4
            str. 11-4623]
 gi|354902028|gb|EHF62150.1| carbamoyl-phosphate synthase large chain [Escherichia coli O104:H4
            str. 11-4632 C1]
 gi|354905354|gb|EHF65437.1| carbamoyl-phosphate synthase large chain [Escherichia coli O104:H4
            str. 11-4632 C2]
 gi|354907861|gb|EHF67917.1| carbamoyl-phosphate synthase large chain [Escherichia coli O104:H4
            str. 11-4632 C3]
 gi|354910132|gb|EHF70160.1| carbamoyl-phosphate synthase large chain [Escherichia coli O104:H4
            str. 11-4632 C4]
 gi|354918333|gb|EHF78289.1| carbamoyl-phosphate synthase large chain [Escherichia coli O104:H4
            str. 11-4632 C5]
 gi|371597949|gb|EHN86767.1| carbamoyl-phosphate synthase large chain [Escherichia coli H494]
 gi|378028595|gb|EHV91212.1| carB [Escherichia coli DEC7C]
 gi|378034133|gb|EHV96699.1| carB [Escherichia coli DEC7D]
 gi|378039050|gb|EHW01555.1| carB [Escherichia coli DEC7B]
 gi|378043217|gb|EHW05653.1| carbamoyl-phosphate synthase large chain [Escherichia coli DEC7E]
 gi|378064513|gb|EHW26673.1| carB [Escherichia coli DEC8C]
 gi|378070013|gb|EHW32096.1| carB [Escherichia coli DEC8D]
 gi|378071130|gb|EHW33201.1| carB [Escherichia coli DEC9B]
 gi|378083385|gb|EHW45318.1| carB [Escherichia coli DEC9A]
 gi|378085054|gb|EHW46948.1| carB [Escherichia coli DEC9D]
 gi|378091665|gb|EHW53493.1| carB [Escherichia coli DEC9C]
 gi|378104315|gb|EHW65974.1| carB [Escherichia coli DEC9E]
 gi|378108764|gb|EHW70376.1| carB [Escherichia coli DEC10A]
 gi|378110435|gb|EHW72030.1| carB [Escherichia coli DEC10D]
 gi|378118626|gb|EHW80128.1| carB [Escherichia coli DEC10B]
 gi|378120341|gb|EHW81822.1| carB [Escherichia coli DEC10C]
 gi|378123471|gb|EHW84889.1| carB [Escherichia coli DEC11A]
 gi|378135049|gb|EHW96362.1| carB [Escherichia coli DEC10E]
 gi|378137248|gb|EHW98531.1| carB [Escherichia coli DEC11B]
 gi|378141256|gb|EHX02473.1| carB [Escherichia coli DEC10F]
 gi|378158343|gb|EHX19368.1| carbamoyl-phosphate synthase large chain [Escherichia coli DEC11C]
 gi|378162212|gb|EHX23177.1| carbamoyl-phosphate synthase large chain [Escherichia coli DEC11E]
 gi|378176364|gb|EHX37170.1| carbamoyl-phosphate synthase large chain [Escherichia coli DEC12A]
 gi|378176736|gb|EHX37541.1| carB [Escherichia coli DEC12B]
 gi|378177743|gb|EHX38531.1| carbamoyl-phosphate synthase large chain [Escherichia coli DEC12C]
 gi|378191723|gb|EHX52298.1| carB [Escherichia coli DEC13A]
 gi|378192454|gb|EHX53012.1| carB [Escherichia coli DEC12D]
 gi|378194308|gb|EHX54823.1| carB [Escherichia coli DEC12E]
 gi|378205893|gb|EHX66300.1| carB [Escherichia coli DEC13B]
 gi|378208967|gb|EHX69343.1| carB [Escherichia coli DEC13D]
 gi|378209649|gb|EHX70017.1| carB [Escherichia coli DEC13C]
 gi|378220432|gb|EHX80690.1| carB [Escherichia coli DEC13E]
 gi|378223534|gb|EHX83753.1| carbamoyl-phosphate synthase large chain [Escherichia coli DEC14A]
 gi|378224371|gb|EHX84574.1| carB [Escherichia coli DEC14D]
 gi|378227990|gb|EHX88157.1| carB [Escherichia coli DEC14B]
 gi|378235385|gb|EHX95455.1| carB [Escherichia coli DEC14C]
 gi|378239084|gb|EHX99078.1| carB [Escherichia coli DEC15B]
 gi|378241932|gb|EHY01898.1| carB [Escherichia coli DEC15C]
 gi|378246286|gb|EHY06213.1| carB [Escherichia coli DEC15A]
 gi|378249801|gb|EHY09710.1| carB [Escherichia coli DEC15D]
 gi|378261660|gb|EHY21451.1| carB [Escherichia coli DEC15E]
 gi|383390063|gb|AFH15021.1| carbamoyl phosphate synthase large subunit [Escherichia coli KO11FL]
 gi|383403458|gb|AFH09701.1| carbamoyl phosphate synthase large subunit [Escherichia coli W]
 gi|383477398|gb|EID69320.1| carbamoyl-phosphate synthase, large subunit [Escherichia coli W26]
 gi|384470698|gb|EIE54798.1| carbamoyl-phosphate synthase, large subunit [Escherichia coli AI27]
 gi|386159877|gb|EIH21691.1| carbamoyl-phosphate synthase, large subunit [Escherichia coli 1.2264]
 gi|386166064|gb|EIH32584.1| carbamoyl-phosphate synthase, large subunit [Escherichia coli
            96.0497]
 gi|386176839|gb|EIH54318.1| carbamoyl-phosphate synthase, large subunit [Escherichia coli 3.2608]
 gi|386185014|gb|EIH67750.1| carbamoyl-phosphate synthase, large subunit [Escherichia coli
            93.0624]
 gi|386210271|gb|EII20751.1| carbamoyl-phosphate synthase, large subunit [Escherichia coli 9.0111]
 gi|386217437|gb|EII33926.1| carbamoyl-phosphate synthase, large subunit [Escherichia coli 4.0967]
 gi|386227432|gb|EII54788.1| carbamoyl-phosphate synthase, large subunit [Escherichia coli 3.3884]
 gi|386261005|gb|EIJ16473.1| carbamoyl-phosphate synthase, large subunit [Escherichia coli 900105
            (10e)]
 gi|388344595|gb|EIL10426.1| carbamoyl phosphate synthase large subunit [Escherichia coli O103:H2
            str. CVM9450]
 gi|388352980|gb|EIL18062.1| carbamoyl phosphate synthase large subunit [Escherichia coli O111:H11
            str. CVM9534]
 gi|388362490|gb|EIL26495.1| carbamoyl phosphate synthase large subunit [Escherichia coli O111:H11
            str. CVM9545]
 gi|388380928|gb|EIL43509.1| carbamoyl phosphate synthase large subunit [Escherichia coli O26:H11
            str. CVM9942]
 gi|388381417|gb|EIL43984.1| hypothetical protein ECO10026_28749 [Escherichia coli O26:H11 str.
            CVM10026]
 gi|388403296|gb|EIL63831.1| carbamoyl phosphate synthase large subunit [Escherichia coli 541-1]
 gi|388414641|gb|EIL74590.1| carbamoyl phosphate synthase large subunit [Escherichia coli CUMT8]
 gi|391257973|gb|EIQ17080.1| carbamoyl-phosphate synthase large chain [Shigella flexneri CCH060]
 gi|391289747|gb|EIQ48231.1| carbamoyl-phosphate synthase large chain [Shigella boydii 4444-74]
 gi|391290096|gb|EIQ48571.1| carbamoyl-phosphate synthase large chain [Shigella sonnei 3233-85]
 gi|391297678|gb|EIQ55723.1| carB [Shigella sonnei 4822-66]
 gi|391307898|gb|EIQ65625.1| carbamoyl-phosphate synthase large chain [Shigella dysenteriae
            225-75]
 gi|391310593|gb|EIQ68245.1| carbamoyl-phosphate synthase large chain [Escherichia coli EPECa12]
 gi|391315591|gb|EIQ73115.1| carB [Escherichia coli EPEC C342-62]
 gi|394386048|gb|EJE63562.1| carbamoyl-phosphate synthase large subunit [Escherichia coli O26:H11
            str. CVM10224]
 gi|394407561|gb|EJE82379.1| carbamoyl phosphate synthase large subunit [Escherichia coli O26:H11
            str. CVM10021]
 gi|394413342|gb|EJE87383.1| carbamoyl phosphate synthase large subunit [Escherichia coli O111:H11
            str. CVM9553]
 gi|394421753|gb|EJE95202.1| carbamoyl phosphate synthase large subunit [Escherichia coli O111:H11
            str. CVM9455]
 gi|394429004|gb|EJF01475.1| carbamoyl phosphate synthase large subunit [Escherichia coli O26:H11
            str. CVM9952]
 gi|394429369|gb|EJF01802.1| carbamoyl phosphate synthase large subunit [Escherichia coli O26:H11
            str. CVM10030]
 gi|397782618|gb|EJK93486.1| carbamoyl-phosphate synthase large chain [Escherichia coli STEC_O31]
 gi|397903672|gb|EJL19967.1| carB [Shigella sonnei str. Moseley]
 gi|404342267|gb|EJZ68656.1| carB [Shigella flexneri 1485-80]
 gi|406779493|gb|AFS58917.1| carbamoyl phosphate synthase large subunit [Escherichia coli O104:H4
            str. 2009EL-2050]
 gi|407056088|gb|AFS76139.1| carbamoyl phosphate synthase large subunit [Escherichia coli O104:H4
            str. 2011C-3493]
 gi|407063528|gb|AFS84575.1| carbamoyl phosphate synthase large subunit [Escherichia coli O104:H4
            str. 2009EL-2071]
 gi|408219652|gb|EKI43770.1| carbamoyl-phosphate synthase large chain [Escherichia coli 3006]
 gi|408311561|gb|EKJ28562.1| carbamoyl-phosphate synthase large chain [Escherichia coli EC1865]
 gi|408348430|gb|EKJ62526.1| carbamoyl-phosphate synthase large chain [Escherichia coli 0.1288]
 gi|412967888|emb|CCJ42501.1| carbamoyl-phosphate synthase large subunit [Escherichia coli]
 gi|421937205|gb|EKT94823.1| carbamoyl-phosphate synthase large subunit [Escherichia coli O111:H11
            str. CFSAN001630]
 gi|421945175|gb|EKU02402.1| carbamoyl-phosphate synthase large subunit [Escherichia coli O26:H11
            str. CFSAN001629]
 gi|429352367|gb|EKY89082.1| carbamoyl-phosphate synthase large chain [Escherichia coli O104:H4
            str. 11-02030]
 gi|429353423|gb|EKY90131.1| carbamoyl-phosphate synthase large chain [Escherichia coli O104:H4
            str. 11-02033-1]
 gi|429353921|gb|EKY90626.1| carbamoyl-phosphate synthase large chain [Escherichia coli O104:H4
            str. 11-02092]
 gi|429367411|gb|EKZ04005.1| carbamoyl-phosphate synthase large chain [Escherichia coli O104:H4
            str. 11-02093]
 gi|429368563|gb|EKZ05149.1| carbamoyl-phosphate synthase large chain [Escherichia coli O104:H4
            str. 11-02281]
 gi|429370789|gb|EKZ07352.1| carbamoyl-phosphate synthase large chain [Escherichia coli O104:H4
            str. 11-02318]
 gi|429383163|gb|EKZ19624.1| carbamoyl-phosphate synthase large chain [Escherichia coli O104:H4
            str. 11-02913]
 gi|429386012|gb|EKZ22462.1| carbamoyl-phosphate synthase large chain [Escherichia coli O104:H4
            str. 11-03439]
 gi|429386925|gb|EKZ23370.1| carbamoyl-phosphate synthase large chain [Escherichia coli O104:H4
            str. 11-03943]
 gi|429398185|gb|EKZ34528.1| carbamoyl-phosphate synthase large chain [Escherichia coli O104:H4
            str. 11-04080]
 gi|429399901|gb|EKZ36219.1| carbamoyl-phosphate synthase large chain [Escherichia coli O104:H4
            str. Ec11-9450]
 gi|429400235|gb|EKZ36552.1| carbamoyl-phosphate synthase large chain [Escherichia coli O104:H4
            str. Ec11-9990]
 gi|429411326|gb|EKZ47536.1| carbamoyl-phosphate synthase large chain [Escherichia coli O104:H4
            str. Ec11-4984]
 gi|429412898|gb|EKZ49088.1| carbamoyl-phosphate synthase large chain [Escherichia coli O104:H4
            str. Ec11-4986]
 gi|429419950|gb|EKZ56084.1| carbamoyl-phosphate synthase large chain [Escherichia coli O104:H4
            str. Ec11-4987]
 gi|429423812|gb|EKZ59919.1| carbamoyl-phosphate synthase large chain [Escherichia coli O104:H4
            str. Ec11-4988]
 gi|429429969|gb|EKZ66036.1| carbamoyl-phosphate synthase large chain [Escherichia coli O104:H4
            str. Ec11-5603]
 gi|429435911|gb|EKZ71928.1| carbamoyl-phosphate synthase large chain [Escherichia coli O104:H4
            str. Ec11-5604]
 gi|429443095|gb|EKZ79048.1| carbamoyl-phosphate synthase large chain [Escherichia coli O104:H4
            str. Ec12-0465]
 gi|429445517|gb|EKZ81458.1| carbamoyl-phosphate synthase large chain [Escherichia coli O104:H4
            str. Ec11-6006]
 gi|429451986|gb|EKZ87873.1| carbamoyl-phosphate synthase large chain [Escherichia coli O104:H4
            str. Ec12-0466]
 gi|429456837|gb|EKZ92680.1| carbamoyl-phosphate synthase large chain [Escherichia coli O104:H4
            str. Ec11-9941]
 gi|430894262|gb|ELC16551.1| carbamoyl-phosphate synthase large chain [Escherichia coli KTE12]
 gi|431011500|gb|ELD25575.1| carbamoyl-phosphate synthase large chain [Escherichia coli KTE210]
 gi|431019902|gb|ELD33293.1| carbamoyl-phosphate synthase large chain [Escherichia coli KTE212]
 gi|431065270|gb|ELD74043.1| carbamoyl-phosphate synthase large chain [Escherichia coli KTE234]
 gi|431208037|gb|ELF06260.1| carbamoyl-phosphate synthase large chain [Escherichia coli KTE142]
 gi|431314395|gb|ELG02347.1| carbamoyl-phosphate synthase large chain [Escherichia coli KTE48]
 gi|431351894|gb|ELG38680.1| carbamoyl-phosphate synthase large chain [Escherichia coli KTE91]
 gi|431358286|gb|ELG44944.1| carbamoyl-phosphate synthase large chain [Escherichia coli KTE101]
 gi|431380678|gb|ELG65317.1| carbamoyl-phosphate synthase large chain [Escherichia coli KTE135]
 gi|431389237|gb|ELG72950.1| carbamoyl-phosphate synthase large chain [Escherichia coli KTE136]
 gi|431457308|gb|ELH37647.1| carbamoyl-phosphate synthase large chain [Escherichia coli KTE184]
 gi|431475540|gb|ELH55344.1| carbamoyl-phosphate synthase large chain [Escherichia coli KTE203]
 gi|431616156|gb|ELI85223.1| carbamoyl-phosphate synthase large chain [Escherichia coli KTE138]
 gi|431652635|gb|ELJ19783.1| carbamoyl-phosphate synthase large chain [Escherichia coli KTE163]
 gi|431664329|gb|ELJ31069.1| carbamoyl-phosphate synthase large chain [Escherichia coli KTE166]
 gi|431697105|gb|ELJ62250.1| carbamoyl-phosphate synthase large chain [Escherichia coli KTE232]
 gi|431723649|gb|ELJ87594.1| carbamoyl-phosphate synthase large chain [Escherichia coli KTE90]
 gi|441653617|emb|CCQ03946.1| Carbamoyl-phosphate synthase large chain [Escherichia coli
            O5:K4(L):H4 str. ATCC 23502]
 gi|443420558|gb|AGC85462.1| carbamoyl phosphate synthase large subunit [Escherichia coli APEC
            O78]
 gi|449323851|gb|EMD13797.1| carbamoyl-phosphate synthase large subunit [Escherichia coli O08]
          Length = 1073

 Score = 1224 bits (3168), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 617/1071 (57%), Positives = 782/1071 (73%), Gaps = 19/1071 (1%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILILGAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  E+V +++EKERPDA+LPTMGGQTALN A+ L   G LE++GV +IGA  DA
Sbjct: 63   ATYIEPIHWEVVRKIIEKERPDAVLPTMGGQTALNCALELERQGVLEEFGVTMIGATADA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  F  AMK IG++T  SGI +T++E +++A ++G FP IIRP+FT+GG+GGGI
Sbjct: 123  IDKAEDRRRFDVAMKKIGLETARSGIAHTMEEALAVAADVG-FPCIIRPSFTMGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEFE IC  GL  S T ++L+++SL+GWKEYE+EV+RD  DN +I+CSIEN D MG
Sbjct: 182  AYNREEFEEICARGLDLSPTKELLIDESLIGWKEYEMEVVRDKNDNCIIVCSIENFDAMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            +HTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGVE GGSNVQFAVNP +G ++VIEMN
Sbjct: 242  IHTGDSITVAPAQTLTDKEYQIMRNASMAVLREIGVETGGSNVQFAVNPKNGRLIVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT  +TPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGYTLDELMNDITGGRTPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            F FEKF G+   LTTQMKSVGE MA+GRT QES QKALR LE G +G+      +     
Sbjct: 362  FNFEKFAGANDRLTTQMKSVGEVMAIGRTQQESLQKALRGLEVGATGFDPKVSLDDPEAL 421

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
             +++  L+    +R+  I  A + G+ VD +  L+ ID+WFL Q +EL+ +E+ +    +
Sbjct: 422  TKIRRELKDAGAERIWYIADAFRAGLSVDGVFNLTNIDRWFLVQIEELVRLEEKVAEVGI 481

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
            + +  +   ++KR+GF+D ++A      E E+R+ R    + P YKRVDTCAAEF  +T 
Sbjct: 482  TGLNAEFLRQLKRKGFADARLAKLAGVREAEIRKLRDQYDLHPVYKRVDTCAAEFATDTA 541

Query: 627  YMYSSYDFECESAP-TQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNS 685
            YMYS+Y+ ECE+ P T ++K+++LGGGPNRIGQGIEFDYCC H S +L+  GYETIM+N 
Sbjct: 542  YMYSTYEEECEANPSTDREKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVNC 601

Query: 686  NPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEH 745
            NPETVSTDYDTSDRLYFEP+T+EDVL ++ +E+P+G+IVQ+GGQTPLKL+          
Sbjct: 602  NPETVSTDYDTSDRLYFEPVTLEDVLEIVRIEKPKGVIVQYGGQTPLKLA---------- 651

Query: 746  RLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEI 805
            R   A+G   V + GTSPD+ID AEDRERF   ++ L ++QP      +   A+  AKEI
Sbjct: 652  RALEAAG---VPVIGTSPDAIDRAEDRERFQHAVERLKLKQPANATVTAIEMAVEKAKEI 708

Query: 806  GYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALA 865
            GYP+VVRPSYVLGGRAMEIVY +  L  Y + AV V  + PVL+D +L DA+E+DVDA+ 
Sbjct: 709  GYPLVVRPSYVLGGRAMEIVYDEADLRRYFQTAVSVSNDAPVLLDHFLDDAVEVDVDAIC 768

Query: 866  DSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMN 925
            D    V+IGGIMEHIEQAGVHSGDSAC +P  T+S    D +     KLA  L V GLMN
Sbjct: 769  DG-EMVLIGGIMEHIEQAGVHSGDSACSLPAYTLSQEIQDVMRQQVQKLAFELQVRGLMN 827

Query: 926  CQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPK 985
             Q+A+  + +VYL+E NPRA+RTVPFVSKA G PLAK AA VM+GKSL + G TKEVIP 
Sbjct: 828  VQFAVKNN-EVYLIEVNPRAARTVPFVSKATGVPLAKVAARVMAGKSLAEQGVTKEVIPP 886

Query: 986  HVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVF 1045
            + SVKE VLPF KF G D LLGPEMRSTGEVMG+  +F  AFAKAQ+ +   +   G   
Sbjct: 887  YYSVKEVVLPFNKFPGVDPLLGPEMRSTGEVMGVGRTFAEAFAKAQLGSNSTMKKHGRAL 946

Query: 1046 LSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVA 1105
            LS+ +  K  +  +A   L  GF++ +T GTA  L   GI    V K+HEGRPH  D + 
Sbjct: 947  LSVREGDKERVVDLAAKLLKQGFELDATHGTAIVLGEAGINPRLVNKVHEGRPHIQDRIK 1006

Query: 1106 NGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRS 1156
            NG+   ++ T+SG    + D   +RR  L YKV   TT++G  A A A+ +
Sbjct: 1007 NGEYTYIINTTSGRRAIE-DSRVIRRSALQYKVHYDTTLNGGFATAMALNA 1056


>gi|398343125|ref|ZP_10527828.1| carbamoyl phosphate synthase large subunit [Leptospira inadai serovar
            Lyme str. 10]
          Length = 1101

 Score = 1224 bits (3168), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 632/1119 (56%), Positives = 795/1119 (71%), Gaps = 58/1119 (5%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KR D+R +LILG+GPIVIGQACEFDYSGTQA KALKE+G  VIL+NSNPATIMTDP LAD
Sbjct: 3    KREDIRSVLILGSGPIVIGQACEFDYSGTQAAKALKEKGIRVILLNSNPATIMTDPELAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TY+ PMT  +V++++EKE+PDA+LPT+GGQTALNLA+A   +G LEKY VELIGAK+DA
Sbjct: 63   ATYVEPMTVSVVQKIIEKEKPDAILPTVGGQTALNLAIACHNAGILEKYEVELIGAKVDA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            IKKAEDR+LFK AM+ IGV  P SG+ N L E   I   IG  PLI+RPAFTLGGTGGGI
Sbjct: 123  IKKAEDRELFKIAMEKIGVSVPRSGLVNNLKEAYEIKARIG-LPLIVRPAFTLGGTGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AY++E FE +   GL AS  SQVL+E+S+LGWKE+ELEVMRDLADNVVIICSIEN+DPMG
Sbjct: 182  AYDEETFEEVVAKGLKASPISQVLLEESVLGWKEFELEVMRDLADNVVIICSIENIDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAP QTL+D EYQ LRD SI IIREIGVE GGSN+QFAVNP +G+V+VIEMN
Sbjct: 242  VHTGDSITVAPQQTLSDTEYQNLRDMSIKIIREIGVETGGSNIQFAVNPANGDVIVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRF 447
            PRVSRSSALASKATGFPIAK+AA LS+GY+LD+I NDIT+ TPASFEPSIDYVVTKIPRF
Sbjct: 302  PRVSRSSALASKATGFPIAKIAALLSIGYTLDEIKNDITRVTPASFEPSIDYVVTKIPRF 361

Query: 448  AFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCS-NVKEL---- 502
            AFEKFPG++  L  QMK+VGEAMA+GRTF+ESFQKA+RSLE    G+G   N  EL    
Sbjct: 362  AFEKFPGTDDTLGVQMKAVGEAMAIGRTFKESFQKAIRSLETDRYGFGSDGNFGELVEFH 421

Query: 503  ----DWDWEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVE 558
                    E++   LR PN  R+  +  A+++G  ++ IHEL  ID WFL QF++L   E
Sbjct: 422  SLSSAARQEKIDAFLRRPNDKRIFYLKKALEEGYSIERIHELCKIDPWFLYQFEDLQIAE 481

Query: 559  QFLLTQSVSNMTKDDFYEVKRRGFSDKQIAFATKST------------------------ 594
            +  L +  + +TK     +KR GFS++Q+A+  K                          
Sbjct: 482  KEFLEKGYTILTK-----MKRLGFSNRQLAYLKKKNEINSILGSSITPDKKKGEISALLR 536

Query: 595  -EKEVREKRL-SLGVIPSYKRVDTCAAEFEANTPYMYSSYDFECESAPTQKKKVLILGGG 652
             E+ + E+ L S  + P YKR+DTCA EFEA TPY YSSYD E E+  T KK V+ILGGG
Sbjct: 537  AEEVILERTLTSSNIEPVYKRIDTCAGEFEAYTPYFYSSYDQEDETEVTDKKSVIILGGG 596

Query: 653  PNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSNPETVSTDYDTSDRLYFEPLTVEDVLN 712
            PNRIGQGIEFDYCCCH SF+LQ  G E+IM+NSNPETVSTDYDTSDRLYFEPLT+EDV +
Sbjct: 597  PNRIGQGIEFDYCCCHASFALQDLGIESIMVNSNPETVSTDYDTSDRLYFEPLTLEDVTH 656

Query: 713  VIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHRLPSASGDGLVRIWGTSPDSIDAAEDR 772
            +   E+P G+I+QFGGQTPLKL+    + L+   +P         I GTSPDSID AEDR
Sbjct: 657  IYRKEKPIGVIIQFGGQTPLKLA----KDLERKGIP---------ILGTSPDSIDRAEDR 703

Query: 773  ERFNAIIKELSIEQPKGGIAKSEADALAIAKEIGYPVVVRPSYVLGGRAMEIVYTDETLV 832
            +RF  ++ +L +  PK GIA S  +A  IAK I YP++VRPSYVLGGRAM I+  +  L 
Sbjct: 704  KRFAEVLDKLKLVSPKNGIATSMEEARKIAKSITYPILVRPSYVLGGRAMLIISEERELD 763

Query: 833  TYLENAVEVDPERPVLIDKYLSDAIEIDVDALADSCGNVVIGGIMEHIEQAGVHSGDSAC 892
             Y+E A E+  +RP+LID +L DA+E+DVDAL D    V I GIMEHIE+AG+HSGDSAC
Sbjct: 764  RYMEKAEEISEDRPLLIDSFLEDAVEVDVDALCDG-KEVFIAGIMEHIEEAGIHSGDSAC 822

Query: 893  MIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNCQYAITTSGDVYLLEANPRASRTVPFV 952
            ++P +++S   ++ I   T  LA  L V GL+N Q+A+     +Y++E NPRASRTVPFV
Sbjct: 823  ILPPQSLSVHVMEEIRKSTRALALELQVKGLINIQFAVKEE-QLYVIEVNPRASRTVPFV 881

Query: 953  SKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRS 1012
            SKA+GH + KYA  +M G+SL+ L   KE+    V+VKEAVLPF KF G D +LGPEMRS
Sbjct: 882  SKALGHAIVKYATRIMMGESLSSLPLPKEMSFPMVNVKEAVLPFNKFPGVDTILGPEMRS 941

Query: 1013 TGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVFLSLNDLTKPHLERIAKAFLDIGFKIVS 1072
            TGEVMGI  +   AF K+Q  AG++LP  GTVF+S+ND  K  L +  K   ++GF +++
Sbjct: 942  TGEVMGIAETAGEAFLKSQYMAGEELPSQGTVFVSVNDKDKKELLKYIKELSNLGFNLIA 1001

Query: 1073 TSGTAHFLELKGIAVERVLKMHEGR-PHAGDMVANGQIQMMVITSSGDSLDQIDGLKLRR 1131
            T GT  +L   G+   ++ K+++   P A D +   +I  +++ +    + + D   +R+
Sbjct: 1002 TEGTHKYLSDNGVLSSKINKVYDNLFPTALDYIRENKIH-LILNTPLSRVTRDDSFAIRQ 1060

Query: 1132 RGLAYKVPVITTVSGALANAEAIRSLKSNTVTMTALQDF 1170
              + YK+P +TT S A A    +  ++    T+ +LQ  
Sbjct: 1061 AAIRYKIPCLTTASAAKALIRGMVEMRDKGFTIRSLQSL 1099


>gi|375258927|ref|YP_005018097.1| carbamoyl phosphate synthase large subunit [Klebsiella oxytoca KCTC
            1686]
 gi|365908405|gb|AEX03858.1| carbamoyl phosphate synthase large subunit [Klebsiella oxytoca KCTC
            1686]
          Length = 1074

 Score = 1224 bits (3168), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 618/1078 (57%), Positives = 783/1078 (72%), Gaps = 19/1078 (1%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILILGAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  E+V +++EKERPDA+LPTMGGQTALN A+ L   G LE++GV +IGA  DA
Sbjct: 63   ATYIEPIHWEVVRKIIEKERPDAVLPTMGGQTALNCALELERQGVLEEFGVTMIGATADA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  F  AMK IG+ T  SGI +T++E +++A E+G FP IIRP+FT+GGTGGGI
Sbjct: 123  IDKAEDRRRFDVAMKKIGLDTARSGIAHTMEEALAVAAEVG-FPCIIRPSFTMGGTGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEFE IC+ GL  S T+++L+++SL+GWKEYE+EV+RD  DN +I+CSIEN D MG
Sbjct: 182  AYNREEFEEICERGLDLSPTNELLIDESLIGWKEYEMEVVRDKNDNCIIVCSIENFDAMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            +HTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGVE GGSNVQF+VNP DG ++VIEMN
Sbjct: 242  IHTGDSITVAPAQTLTDKEYQIMRNASMAVLREIGVETGGSNVQFSVNPKDGRLIVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT  +TPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGYTLDELMNDITGGRTPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            F FEKF G+   LTTQMKSVGE MA+GRT QES QKALR LE G +G+      +     
Sbjct: 362  FNFEKFVGANDRLTTQMKSVGEVMAIGRTQQESLQKALRGLEVGATGFDPKVSLDDPEAL 421

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
             +++  L+    +R+  I  A + G+ VD +  L+ ID+WFL Q +EL+ +E+ +    +
Sbjct: 422  TKIRRELKDAGAERIWYIADAFRAGLSVDGVFNLTNIDRWFLVQIEELVRLEEKVAEVGI 481

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
            + +  D   ++KR+GF+D ++A      E E+R+ R    + P YKRVDTCAAEF  +T 
Sbjct: 482  TGLDADFLRQLKRKGFADARLAKLAGVREAEIRKLRDQYDLHPVYKRVDTCAAEFATDTA 541

Query: 627  YMYSSYDFECESAPT-QKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNS 685
            YMYS+Y+ ECE+ P+  + K+++LGGGPNRIGQGIEFDYCC H S +L+  GYETIM+N 
Sbjct: 542  YMYSTYEDECEANPSVDRDKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVNC 601

Query: 686  NPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEH 745
            NPETVSTDYDTSDRLYFEP+T+EDVL ++ +E+P+G+IVQ+GGQTPLKL+          
Sbjct: 602  NPETVSTDYDTSDRLYFEPVTLEDVLEIVRIEKPKGVIVQYGGQTPLKLA---------- 651

Query: 746  RLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEI 805
            R   A+G   V + GTSPD+ID AEDRERF   +  L ++QP      +   A+  AKEI
Sbjct: 652  RALEAAG---VPVIGTSPDAIDRAEDRERFQHAVDRLKLKQPANATVTAIEMAVEKAKEI 708

Query: 806  GYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALA 865
            GYP+VVRPSYVLGGRAMEIVY +  L  Y + AV V  + PVL+D++L DA+E+DVDA+ 
Sbjct: 709  GYPLVVRPSYVLGGRAMEIVYDEIDLRRYFQTAVSVSNDAPVLLDRFLDDAVEVDVDAIC 768

Query: 866  DSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMN 925
            D    V+IGGIMEHIEQAGVHSGDSAC +P  T+S    D +     KLA  L V GLMN
Sbjct: 769  DG-EMVLIGGIMEHIEQAGVHSGDSACSLPAYTLSQEIQDVMREQVQKLAFELQVRGLMN 827

Query: 926  CQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPK 985
             Q+A+  + +VYL+E NPRA+RTVPFVSKA G PLAK AA VM+GK+L   G TKE+IP 
Sbjct: 828  VQFAVKNN-EVYLIEVNPRAARTVPFVSKATGVPLAKVAARVMAGKTLAQQGVTKEIIPP 886

Query: 986  HVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVF 1045
            + SVKE VLPF KF G D LLGPEMRSTGEVMG+  +F  AFAKAQ+ +   +   G   
Sbjct: 887  YYSVKEVVLPFNKFPGVDPLLGPEMRSTGEVMGVGRTFAEAFAKAQLGSNSTMKKQGRAL 946

Query: 1046 LSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVA 1105
            LS+ +  K  +  +A   L  GF++ +T GTA  L   GI    V K+HEGRPH  D + 
Sbjct: 947  LSVREGDKERVVDLAAKLLKFGFELDATHGTAIVLGEAGINPRLVNKVHEGRPHIQDRIK 1006

Query: 1106 NGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTVT 1163
            NG+   ++ T++G    + D   +RR  L YKV   TT++G  A A A+ +     VT
Sbjct: 1007 NGEYTYIINTTAGRQAIE-DSKLIRRSALQYKVHYDTTLNGGFATAMALNANAMEKVT 1063


>gi|206579070|ref|YP_002240498.1| carbamoyl phosphate synthase large subunit [Klebsiella pneumoniae
            342]
 gi|288937198|ref|YP_003441257.1| carbamoyl-phosphate synthase, large subunit [Klebsiella variicola
            At-22]
 gi|290512619|ref|ZP_06551985.1| carbamoyl-phosphate synthase, large subunit [Klebsiella sp. 1_1_55]
 gi|206568128|gb|ACI09904.1| carbamoyl-phosphate synthase, large subunit [Klebsiella pneumoniae
            342]
 gi|288891907|gb|ADC60225.1| carbamoyl-phosphate synthase, large subunit [Klebsiella variicola
            At-22]
 gi|289774960|gb|EFD82962.1| carbamoyl-phosphate synthase, large subunit [Klebsiella sp. 1_1_55]
          Length = 1074

 Score = 1224 bits (3168), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 616/1071 (57%), Positives = 781/1071 (72%), Gaps = 19/1071 (1%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILILGAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  E+V +++EKERPDA+LPTMGGQTALN A+ L   G L ++GV +IGA  DA
Sbjct: 63   ATYIEPIHWEVVRKIIEKERPDAVLPTMGGQTALNCALELERQGVLAEFGVTMIGATADA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  F  AMK IG+ T  SGI +T++E +++A ++G FP IIRP+FT+GGTGGGI
Sbjct: 123  IDKAEDRRRFDVAMKKIGLDTARSGIAHTMEEALAVAADVG-FPCIIRPSFTMGGTGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEFE IC+ GL  S T+++L+++SL+GWKEYE+EV+RD  DN +I+CSIEN D MG
Sbjct: 182  AYNREEFEEICERGLDLSPTNELLIDESLIGWKEYEMEVVRDKNDNCIIVCSIENFDAMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            +HTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGVE GGSNVQF+VNP DG ++VIEMN
Sbjct: 242  IHTGDSITVAPAQTLTDKEYQIMRNASMAVLREIGVETGGSNVQFSVNPKDGRLIVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT  +TPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGYTLDELMNDITGGRTPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            F FEKF G+   LTTQMKSVGE MA+GRT QES QKALR LE G +G+      +     
Sbjct: 362  FNFEKFAGANDRLTTQMKSVGEVMAIGRTQQESLQKALRGLEVGATGFDPKVSLDDPEAL 421

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
             +++  L+    +R+  I  A + G+ VD +  L+ ID+WFL Q +EL+ +E+ ++   +
Sbjct: 422  TKIRRELKDAGAERIWYIADAFRAGLSVDGVFNLTNIDRWFLVQIEELVRLEEKVVEVGI 481

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
            + +  D    +KR+GF+D ++A      E E+R+ R    + P YKRVDTCAAEF  +T 
Sbjct: 482  NGLDADFLRTLKRKGFADARLAKLAGVREAEIRKLRDQYDLHPVYKRVDTCAAEFATDTA 541

Query: 627  YMYSSYDFECESAPT-QKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNS 685
            YMYS+Y+ ECES P+  + K+++LGGGPNRIGQGIEFDYCC H S +L+  GYETIM+N 
Sbjct: 542  YMYSTYEEECESNPSVDRDKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVNC 601

Query: 686  NPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEH 745
            NPETVSTDYDTSDRLYFEP+T+EDVL ++ +E+P+G+IVQ+GGQTPLKL+          
Sbjct: 602  NPETVSTDYDTSDRLYFEPVTLEDVLEIVRIEKPKGVIVQYGGQTPLKLA---------- 651

Query: 746  RLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEI 805
            R   A+G   V + GTSPD+ID AEDRERF   +  L ++QP      +   A+  AKEI
Sbjct: 652  RALEAAG---VPVIGTSPDAIDRAEDRERFQHAVDRLKLKQPANATVTAIEQAVERAKEI 708

Query: 806  GYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALA 865
            GYP+VVRPSYVLGGRAMEIVY ++ L  Y + AV V  + PVL+D++L DAIE+DVDA+ 
Sbjct: 709  GYPLVVRPSYVLGGRAMEIVYDEQDLRRYFQTAVSVSNDAPVLLDRFLDDAIEVDVDAIC 768

Query: 866  DSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMN 925
            D    V+IGGIMEHIEQAGVHSGDSAC +P  T+S    D +     KLA  L V GLMN
Sbjct: 769  DG-EMVLIGGIMEHIEQAGVHSGDSACSLPAYTLSQEIQDVMREQVQKLAFELQVRGLMN 827

Query: 926  CQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPK 985
             Q+A+  + +VYL+E NPRA+RTVPFVSKA G PLAK AA VM+GK+L   G TKE+IP 
Sbjct: 828  VQFAVKDN-EVYLIEVNPRAARTVPFVSKATGVPLAKVAARVMAGKTLAQQGVTKEIIPP 886

Query: 986  HVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVF 1045
            + SVKE VLPF KF G D LLGPEMRSTGEVMG+  +F  AFAKAQ+ +   +   G   
Sbjct: 887  YYSVKEVVLPFNKFPGVDPLLGPEMRSTGEVMGVGRTFAEAFAKAQLGSNSTMKKQGRAL 946

Query: 1046 LSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVA 1105
            LS+ +  K  +  +A   L  GF++ +T GTA  L   GI    V K+HEGRPH  D + 
Sbjct: 947  LSVREGDKERVVDLAAKLLKFGFELDATHGTAIVLGEAGINPRLVNKVHEGRPHIQDRIK 1006

Query: 1106 NGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRS 1156
            NG+   ++ T++G    + D   +RR  L YKV   TT++G  A A A+ +
Sbjct: 1007 NGEYTYIINTTAGRQAIE-DSKLIRRSALQYKVHYDTTLNGGFATAMALNA 1056


>gi|432800349|ref|ZP_20034341.1| carbamoyl-phosphate synthase large chain [Escherichia coli KTE84]
 gi|431352082|gb|ELG38866.1| carbamoyl-phosphate synthase large chain [Escherichia coli KTE84]
          Length = 1073

 Score = 1224 bits (3168), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 617/1071 (57%), Positives = 781/1071 (72%), Gaps = 19/1071 (1%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILILGAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  E+V +++EKERPDA+LPTMGGQTALN A+ L   G LE++GV +IGA  DA
Sbjct: 63   ATYIEPIHWEVVRKIIEKERPDAVLPTMGGQTALNCALELERQGVLEEFGVTMIGATADA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  F  AMK IG++T  SGI ++++E +++A E+G FP IIRP+FT+GG+GGGI
Sbjct: 123  IDKAEDRRRFDVAMKKIGLETARSGIAHSMEEALAVAAEVG-FPCIIRPSFTMGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEFE IC  GL  S T ++L+++SL+GWKEYE+EV+RD  DN +I+CSIEN D MG
Sbjct: 182  AYNREEFEEICARGLDLSPTKELLIDESLIGWKEYEMEVVRDKNDNCIIVCSIENFDAMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            +HTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGVE GGSNVQFAVNP +G ++VIEMN
Sbjct: 242  IHTGDSITVAPAQTLTDKEYQIMRNASMAVLREIGVETGGSNVQFAVNPKNGRLIVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT  +TPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGYTLDELMNDITGGRTPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            F FEKF G+   LTTQMKSVGE MA+GRT QES QKALR LE G +G+      +     
Sbjct: 362  FNFEKFAGANDRLTTQMKSVGEVMAIGRTQQESLQKALRGLEVGATGFDPKVSLDDPEAL 421

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
             +++  L+    +R+  I  A + G+ VD +  L+ ID+WFL Q +EL+ +E+ +    +
Sbjct: 422  TKIRRELKDAGAERIWYIADAFRAGLSVDGVFNLTNIDRWFLVQIEELVRLEEKVAEVGI 481

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
            + +  +   ++KR+GF+D ++A      E E+R+ R    + P YKRVDTCAAEF  +T 
Sbjct: 482  TGLNAEFLRQLKRKGFADARLAKLAGVREAEIRKLRDQYDLHPVYKRVDTCAAEFATDTA 541

Query: 627  YMYSSYDFECESAP-TQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNS 685
            YMYS+Y+ ECE+ P T ++K+++LGGGPNRIGQGIEFDYCC H S +L+  GYETIM+N 
Sbjct: 542  YMYSTYEEECEANPSTDREKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVNC 601

Query: 686  NPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEH 745
            NPETVSTDYDTSDRLYFEP+T+EDVL ++ +E+P+G+IVQ+GGQTPLKL+          
Sbjct: 602  NPETVSTDYDTSDRLYFEPVTLEDVLEIVRIEKPKGVIVQYGGQTPLKLA---------- 651

Query: 746  RLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEI 805
            R   A+G   V + GTSPD+ID AEDRERF   +  L ++QP      +   A+  AKEI
Sbjct: 652  RALEAAG---VPVIGTSPDAIDRAEDRERFQHAVDRLKLKQPANATVTAIEMAVEKAKEI 708

Query: 806  GYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALA 865
            GYP+VVRPSYVLGGRAMEIVY +  L  Y + AV V  + PVL+D +L DA+E+DVDA+ 
Sbjct: 709  GYPLVVRPSYVLGGRAMEIVYDEADLRRYFQTAVSVSNDAPVLLDHFLDDAVEVDVDAIC 768

Query: 866  DSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMN 925
            D    V+IGGIMEHIEQAGVHSGDSAC +P  T+S    D +     KLA  L V GLMN
Sbjct: 769  DG-EMVLIGGIMEHIEQAGVHSGDSACSLPAYTLSQEIQDVMRQQVQKLAFELQVRGLMN 827

Query: 926  CQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPK 985
             Q+A+  + +VYL+E NPRA+RTVPFVSKA G PLAK AA VM+GKSL + G TKEVIP 
Sbjct: 828  VQFAVKNN-EVYLIEVNPRAARTVPFVSKATGVPLAKVAARVMAGKSLAEQGVTKEVIPP 886

Query: 986  HVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVF 1045
            + SVKE VLPF KF G D LLGPEMRSTGEVMG+  +F  AFAKAQ+ +   +   G   
Sbjct: 887  YYSVKEVVLPFNKFPGVDPLLGPEMRSTGEVMGVGRTFAEAFAKAQLGSNSTMKKHGRAL 946

Query: 1046 LSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVA 1105
            LS+ +  K  +  +A   L  GF++ +T GTA  L   GI    V K+HEGRPH  D + 
Sbjct: 947  LSVREGDKERVVDLAAKLLKQGFELDATHGTAIVLGEAGINPRLVNKVHEGRPHIQDRIK 1006

Query: 1106 NGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRS 1156
            NG+   ++ T+SG    + D   +RR  L YKV   TT++G  A A A+ +
Sbjct: 1007 NGEYTYIINTTSGRRAIE-DSRVIRRSALQYKVHYDTTLNGGFATAMALNA 1056


>gi|167574345|ref|ZP_02367219.1| carbamoyl phosphate synthase large subunit [Burkholderia oklahomensis
            C6786]
          Length = 1088

 Score = 1224 bits (3168), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 633/1091 (58%), Positives = 803/1091 (73%), Gaps = 38/1091 (3%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD+  ILI+GAGPI+IGQACEFDYSG QACKAL+EEGY+VIL+NSNPATIMTDP  AD
Sbjct: 3    KRTDINSILIIGAGPIIIGQACEFDYSGAQACKALREEGYKVILVNSNPATIMTDPNTAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+T E+VE+++EKERPDA+LPTMGGQTALN A+ L   G LEKYGVELIGA   A
Sbjct: 63   VTYIEPITWEVVERIIEKERPDAILPTMGGQTALNCALDLHHHGVLEKYGVELIGASPAA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGE------FPLIIRPAFTLG 261
            I KAEDR  FK AM  IG+ +  SGI ++++E + +  EI        +P +IRP+FTLG
Sbjct: 123  IDKAEDRQKFKDAMTKIGLGSAKSGIAHSMEEALKVHAEIAAATGGSGYPAVIRPSFTLG 182

Query: 262  GTGGGIAYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIE 321
            G+GGGIAYN+EEFE ICK GL  S T ++L+E+SLLGWKEYE+EV+RD ADN +I+CSIE
Sbjct: 183  GSGGGIAYNREEFEEICKRGLDLSPTRELLIEESLLGWKEYEMEVVRDRADNCIIVCSIE 242

Query: 322  NVDPMGVHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEV 381
            N+DPMGVHTGDSITVAPAQTLTDKEYQ LR+ S+A++REIGV+ GGSNVQFA+NP DG +
Sbjct: 243  NLDPMGVHTGDSITVAPAQTLTDKEYQILRNASLAVLREIGVDTGGSNVQFAINPRDGRM 302

Query: 382  MVIEMNPRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYV 440
            +VIEMNPRVSRSSALASKATGFPIAK+AAKL++GY+LD++ N+IT  +TPASFEP+IDYV
Sbjct: 303  VVIEMNPRVSRSSALASKATGFPIAKVAAKLAIGYTLDELKNEITGGQTPASFEPTIDYV 362

Query: 441  VTKIPRFAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVK 500
            VTKIPRFAFEKF  ++  LTTQMKSVGE MA+GRTFQESFQKALR LE G  G     + 
Sbjct: 363  VTKIPRFAFEKFREADSRLTTQMKSVGEVMAIGRTFQESFQKALRGLEVGVDG-----LD 417

Query: 501  ELDWDWEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQF 560
            E     +++   +  P PDR+  +  A + GM  ++I E + ID WFL Q ++++  E+ 
Sbjct: 418  EKTTSSDEIIREIGEPGPDRIWYVGDAFRVGMSREQIFEETAIDPWFLEQIEQIVLKEKA 477

Query: 561  LLTQSVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAE 620
            L  ++++++TKD+ + +K+ GFSD+++A    +T  +VR +RL L V P YKRVDTCAAE
Sbjct: 478  LAGRTLASLTKDELHYLKQSGFSDRRLAKLLGATPADVRARRLELNVRPVYKRVDTCAAE 537

Query: 621  FEANTPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYET 680
            F   T YMYS+Y+ ECE+ PT  KK+++LGGGPNRIGQGIEFDYCC H + +++  GYET
Sbjct: 538  FATKTAYMYSTYEEECEAQPTTNKKIMVLGGGPNRIGQGIEFDYCCVHAALAMREDGYET 597

Query: 681  IMMNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQ 740
            IM+N NPETVSTDYDTSDRLYFEPLT+EDVL ++D E+P G+IVQ+GGQTPLKL+L    
Sbjct: 598  IMVNCNPETVSTDYDTSDRLYFEPLTLEDVLEIVDKEKPVGVIVQYGGQTPLKLALD--- 654

Query: 741  YLDEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALA 800
             L+ H +P         I GTSPD IDAAEDRERF  ++++L + QP    A++E +ALA
Sbjct: 655  -LEAHGVP---------IIGTSPDMIDAAEDRERFQKLLQDLDLRQPPNRTARAEDEALA 704

Query: 801  IAKEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEID 860
            +A+EIGYP+VVRPSYVLGGRAMEIV+    L  Y+  AV+V  + PVL+D++L+DAIE D
Sbjct: 705  LAEEIGYPLVVRPSYVLGGRAMEIVHEPRDLERYMREAVKVSNDSPVLLDRFLNDAIECD 764

Query: 861  VDALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNV 920
            VD + D    V IGG+MEHIEQAGVHSGDSAC +P  ++S   +  +   T  +AK LNV
Sbjct: 765  VDCICDG-DAVFIGGVMEHIEQAGVHSGDSACSLPPYSLSKETVAELKRQTGAMAKALNV 823

Query: 921  CGLMNCQYAI--------TTSGD----VYLLEANPRASRTVPFVSKAIGHPLAKYAALVM 968
             GLMN Q+AI         T G     +Y+LE NPRASRTVP+VSKA   PLAK AA  M
Sbjct: 824  VGLMNVQFAIQQVPADANATDGPKEDIIYVLEVNPRASRTVPYVSKATSLPLAKIAARAM 883

Query: 969  SGKSLNDLGFTKEVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFA 1028
             G++L + G TKEV P + SVKEAV PF KF   D +LGPEMRSTGEVMG+  +F  A  
Sbjct: 884  VGQTLAEQGVTKEVEPPYFSVKEAVFPFIKFPTVDPVLGPEMRSTGEVMGVGTTFGEALF 943

Query: 1029 KAQIAAGQKLPLSGTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVE 1088
            K+Q+AAG +LP SGTV L++ D  KP    +A+   D+G+ +V+T GTA  +E  G+ V+
Sbjct: 944  KSQLAAGSRLPESGTVLLTVMDADKPKAVEVARMLHDLGYPLVATRGTAAAIEAAGVPVK 1003

Query: 1089 RVLKMHEGRPHAGDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGAL 1148
             V K+ +GRPH  DM+ NG+I ++  T         D   +R    A+KV   TT+SGA 
Sbjct: 1004 VVNKVKDGRPHIVDMIKNGEIALVFTTVDETRAAIADSRSIRMSAQAHKVTYYTTMSGAR 1063

Query: 1149 ANAEAIRSLKS 1159
            A  E +R LK+
Sbjct: 1064 AAVEGLRYLKN 1074


>gi|432439368|ref|ZP_19681734.1| carbamoyl-phosphate synthase large chain [Escherichia coli KTE189]
 gi|432444491|ref|ZP_19686803.1| carbamoyl-phosphate synthase large chain [Escherichia coli KTE191]
 gi|432552069|ref|ZP_19788803.1| carbamoyl-phosphate synthase large chain [Escherichia coli KTE47]
 gi|433012207|ref|ZP_20200596.1| carbamoyl-phosphate synthase large chain [Escherichia coli KTE104]
 gi|433026402|ref|ZP_20214356.1| carbamoyl-phosphate synthase large chain [Escherichia coli KTE106]
 gi|433326740|ref|ZP_20403491.1| carbamoyl phosphate synthase large subunit [Escherichia coli J96]
 gi|430970080|gb|ELC87166.1| carbamoyl-phosphate synthase large chain [Escherichia coli KTE189]
 gi|430976966|gb|ELC93818.1| carbamoyl-phosphate synthase large chain [Escherichia coli KTE191]
 gi|431087768|gb|ELD93689.1| carbamoyl-phosphate synthase large chain [Escherichia coli KTE47]
 gi|431527829|gb|ELI04543.1| carbamoyl-phosphate synthase large chain [Escherichia coli KTE106]
 gi|431536776|gb|ELI12932.1| carbamoyl-phosphate synthase large chain [Escherichia coli KTE104]
 gi|432345292|gb|ELL39808.1| carbamoyl phosphate synthase large subunit [Escherichia coli J96]
          Length = 1073

 Score = 1224 bits (3168), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 619/1072 (57%), Positives = 783/1072 (73%), Gaps = 21/1072 (1%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILILGAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  E+V +++EKERPDA+LPTMGGQTALN A+ L   G LE++GV +IGA  DA
Sbjct: 63   ATYIEPIHWEVVRKIIEKERPDAVLPTMGGQTALNCALELERQGVLEEFGVTMIGATADA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  F  AMK IG++T  SGI ++++E +++A E+G FP IIRP+FT+GG+GGGI
Sbjct: 123  IDKAEDRRRFDVAMKKIGLETARSGIAHSMEEALAVAAEVG-FPCIIRPSFTMGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEFE IC  GL  S T ++L+++SL+GWKEYE+EV+RD  DN +I+CSIEN D MG
Sbjct: 182  AYNREEFEEICARGLDLSPTKELLIDESLIGWKEYEMEVVRDKNDNCIIVCSIENFDAMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            +HTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGVE GGSNVQFAVNP +G ++VIEMN
Sbjct: 242  IHTGDSITVAPAQTLTDKEYQIMRNASMAVLREIGVETGGSNVQFAVNPKNGRLIVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT  +TPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGYTLDELMNDITGGRTPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            F FEKF G+   LTTQMKSVGE MA+GRT QES QKALR LE G +G+      +     
Sbjct: 362  FNFEKFAGANDRLTTQMKSVGEVMAIGRTQQESLQKALRGLEVGATGFDPKVSLDDPEAL 421

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
             +++  L+    +R+  I  A + G+ VD +  L+ ID+WFL Q +EL+ +E+ +    +
Sbjct: 422  TKIRRELKDAGAERIWYIADAFRAGLSVDGVFNLTNIDRWFLVQIEELVRLEEKVAEVGI 481

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
            + +  +   ++KR+GF+D ++A      E E+R+ R    + P YKRVDTCAAEF  +T 
Sbjct: 482  TGLNAEFLRQLKRKGFADARLAKLAGVREAEIRKLRDQYDLHPVYKRVDTCAAEFATDTA 541

Query: 627  YMYSSYDFECESAP-TQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNS 685
            YMYS+Y+ ECE+ P T ++K+++LGGGPNRIGQGIEFDYCC H S +L+  GYETIM+N 
Sbjct: 542  YMYSTYEEECEANPSTDREKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVNC 601

Query: 686  NPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEH 745
            NPETVSTDYDTSDRLYFEP+T+EDVL ++ +E+P+G+IVQ+GGQTPLKL+          
Sbjct: 602  NPETVSTDYDTSDRLYFEPVTLEDVLEIVRIEKPKGVIVQYGGQTPLKLA---------- 651

Query: 746  RLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEI 805
            R   A+G   V + GTSPD+ID AEDRERF   ++ L ++QP      +   A+  AKEI
Sbjct: 652  RALEAAG---VPVIGTSPDAIDRAEDRERFQHAVERLKLKQPANATVTTIEMAVEKAKEI 708

Query: 806  GYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALA 865
            GYP+VVRPSYVLGGRAMEIVY +  L  Y + AV V  + PVL+D +L DA+E+DVDA+ 
Sbjct: 709  GYPLVVRPSYVLGGRAMEIVYDEADLRRYFQTAVSVSNDAPVLLDHFLDDAVEVDVDAIC 768

Query: 866  DSCGNVV-IGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLM 924
            D  G VV IGGIMEHIEQAGVHSGDSAC +P  T+S    D +     KLA  L V GLM
Sbjct: 769  D--GEVVLIGGIMEHIEQAGVHSGDSACSLPAYTLSQEIQDVMRQQVQKLAFELQVRGLM 826

Query: 925  NCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIP 984
            N Q+A+  + +VYL+E NPRA+RTVPFVSKA G PLAK AA VM+GKSL + G TKEVIP
Sbjct: 827  NVQFAVKNN-EVYLIEVNPRAARTVPFVSKATGVPLAKVAARVMAGKSLAEQGVTKEVIP 885

Query: 985  KHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTV 1044
             + SVKE VLPF KF G D LLGPEMRSTGEVMG+  +F  AFAKAQ+ +   +   G  
Sbjct: 886  PYYSVKEVVLPFNKFPGVDPLLGPEMRSTGEVMGVGRTFAEAFAKAQLGSNSTMKKHGRA 945

Query: 1045 FLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMV 1104
             LS+ +  K  +  +A   L  GF++ +T GTA  L   GI    V K+HEGRPH  D +
Sbjct: 946  LLSVREGDKERVVDLAAKLLKQGFELDATHGTAIVLGEAGINPRLVNKVHEGRPHIQDRI 1005

Query: 1105 ANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRS 1156
             NG+   ++ T+SG    + D   +RR  L YKV   TT++G  A A A+ +
Sbjct: 1006 KNGEYTYIINTTSGRRAIE-DSRVIRRSALQYKVHYDTTLNGGFATAMALNA 1056


>gi|188532866|ref|YP_001906663.1| carbamoyl phosphate synthase large subunit [Erwinia tasmaniensis
            Et1/99]
 gi|188027908|emb|CAO95765.1| Carbamoyl-phosphate synthase large chain [Erwinia tasmaniensis
            Et1/99]
          Length = 1074

 Score = 1224 bits (3167), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 612/1077 (56%), Positives = 785/1077 (72%), Gaps = 19/1077 (1%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILILGAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  E+V +++EKERPDA+LPTMGGQTALN A+ L   G L ++GV +IGA  DA
Sbjct: 63   ATYIEPIHWEVVRKIIEKERPDAVLPTMGGQTALNCALELERQGVLAEFGVTMIGATADA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  F  AMK+IG+ T  SGI +T++E +++A ++G FP IIRP+FT+GGTGGGI
Sbjct: 123  IDKAEDRRRFDVAMKSIGLDTARSGIAHTMEEALAVAADVG-FPCIIRPSFTMGGTGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEFE IC+ GL  S T+++L+++SL+GWKEYE+EV+RD  DN +I+CSIEN D MG
Sbjct: 182  AYNREEFEEICERGLDLSPTNELLIDESLIGWKEYEMEVVRDKNDNCIIVCSIENFDAMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            +HTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGVE GGSNVQF+VNP +G +++IEMN
Sbjct: 242  IHTGDSITVAPAQTLTDKEYQIMRNASMAVLREIGVETGGSNVQFSVNPENGRLIIIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKK-TPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT   TPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKIAAKLAVGYTLDELMNDITGGLTPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            F FEKF G+   LTTQMKSVGE MA+GRT QES QKALR LE G +G+            
Sbjct: 362  FNFEKFAGTNDRLTTQMKSVGEVMAIGRTLQESMQKALRGLEVGANGFDPKVDLNDPEAL 421

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
              ++  L+    DR+  I  A + G+ V+++  L+ +D+WFL Q +EL+ +EQ +  + V
Sbjct: 422  TTIRRELKDAGSDRIWYIADAFRAGLTVEDVFALTNVDRWFLVQIEELVQLEQQVAQEGV 481

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
            S ++ D    +KR+GF+D +++      E E+R+ R    + P YKRVDTCAAEF  +T 
Sbjct: 482  SGLSYDFLRTLKRKGFADARLSALAGVPESEIRQLREQHNLHPVYKRVDTCAAEFSTDTA 541

Query: 627  YMYSSYDFECESAPTQ-KKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNS 685
            YMYS+Y+ ECE+ P Q + K+++LGGGPNRIGQGIEFDYCC H S +L+  G+ETIM+N 
Sbjct: 542  YMYSTYEEECEANPHQDRDKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGFETIMVNC 601

Query: 686  NPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEH 745
            NPETVSTDYDTSDRLYFEP+T+EDVL ++ +E+P+G+IVQ+GGQTPLKL+          
Sbjct: 602  NPETVSTDYDTSDRLYFEPVTLEDVLEIVRIEKPKGVIVQYGGQTPLKLA---------- 651

Query: 746  RLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEI 805
            R   A+G   V + GTSPD+ID AEDRERF   ++ L ++QP      +   A+  A  I
Sbjct: 652  RALEAAG---VPVIGTSPDAIDRAEDRERFQQAVERLGLKQPANATVTAIEMAVEKAAII 708

Query: 806  GYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALA 865
            GYP+VVRPSYVLGGRAMEIVY +  L  Y   AV V  + PVL+D++L DA+E+DVDA+ 
Sbjct: 709  GYPLVVRPSYVLGGRAMEIVYDEIDLKRYFNTAVSVSNDAPVLLDRFLDDAVEVDVDAIC 768

Query: 866  DSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMN 925
            D    V+IGGIMEHIEQAGVHSGDSAC +P  T+S+   D +     KLA  L V GLMN
Sbjct: 769  DG-EQVLIGGIMEHIEQAGVHSGDSACSLPAYTLSAEIQDVMREQVKKLAFELGVRGLMN 827

Query: 926  CQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPK 985
             Q+A+  + +VYL+E NPRA+RTVPFVSKA G PLAK AA VM+GK+L   G TKE+IP 
Sbjct: 828  VQFAVKDN-EVYLIEVNPRAARTVPFVSKATGMPLAKVAARVMAGKTLAAQGMTKEIIPP 886

Query: 986  HVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVF 1045
            + SVKE VLPF KFQG D +LGPEMRSTGEVMG+  +F  AF KA + A   +  SG   
Sbjct: 887  YYSVKEVVLPFNKFQGVDPILGPEMRSTGEVMGVGRNFAEAFCKAMLGAQSNMKKSGRAL 946

Query: 1046 LSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVA 1105
            LS+ +  K  +  +A+   + GF++ +T+GTA  L   GI V +V K+HEGRPH  D + 
Sbjct: 947  LSVREGDKKRIVELARRLQEFGFELDATAGTASVLTAAGIEVRQVNKVHEGRPHIQDRLK 1006

Query: 1106 NGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTV 1162
            NG+   +V T++G    + D   +RR  L YKV   TT++G  A A ++ +  +  V
Sbjct: 1007 NGEYAYIVNTTAGRQAIE-DSKLIRRSALQYKVHYDTTLNGGFATANSLNASATEQV 1062


>gi|417229721|ref|ZP_12031307.1| carbamoyl-phosphate synthase, large subunit [Escherichia coli 5.0959]
 gi|386206211|gb|EII10717.1| carbamoyl-phosphate synthase, large subunit [Escherichia coli 5.0959]
          Length = 1073

 Score = 1224 bits (3167), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 617/1071 (57%), Positives = 782/1071 (73%), Gaps = 19/1071 (1%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILILGAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  E+V +++EKERPDA+LPTMGGQTALN A+ L   G LE++GV +IGA  DA
Sbjct: 63   ATYIEPIHWEVVRKIIEKERPDAVLPTMGGQTALNCALELERQGVLEEFGVTMIGATADA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  F  AMK IG++T  SGI +T++E +++A ++G FP IIRP+FT+GG+GGGI
Sbjct: 123  IDKAEDRRRFDVAMKKIGLETARSGIAHTMEEALAVAADVG-FPCIIRPSFTMGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEFE IC  GL  S T ++L+++SL+GWKEYE+EV+RD  DN +I+CSIEN D MG
Sbjct: 182  AYNREEFEEICARGLDLSPTKELLIDESLIGWKEYEMEVVRDKNDNCIIVCSIENFDAMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            +HTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGVE GGSNVQFAVNP +G ++VIEMN
Sbjct: 242  IHTGDSITVAPAQTLTDKEYQIMRNASMAVLREIGVETGGSNVQFAVNPKNGRLIVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT  +TPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGYTLDELMNDITGGRTPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            F FEKF G+   LTTQMKSVGE MA+GRT QES QKALR LE G +G+      +     
Sbjct: 362  FNFEKFAGANDRLTTQMKSVGEVMAIGRTQQESLQKALRGLEVGATGFDPKVSLDDPEAL 421

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
             +++  L+    +R+  I  A + G+ VD +  L+ ID+WFL Q +EL+ +E+ +    +
Sbjct: 422  TKIRRELKDAGAERIWFIADAFRAGLSVDGVFNLTNIDRWFLVQIEELVRLEEKVAEVGI 481

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
            + +  +   ++KR+GF+D ++A      E E+R+ R    + P YKRVDTCAAEF  +T 
Sbjct: 482  TGLNAEFLRQLKRKGFADARLAKLAGVREAEIRKLRDQYDLHPVYKRVDTCAAEFATDTA 541

Query: 627  YMYSSYDFECESAP-TQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNS 685
            YMYS+Y+ ECE+ P T ++K+++LGGGPNRIGQGIEFDYCC H S +L+  GYETIM+N 
Sbjct: 542  YMYSTYEEECEANPSTDREKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVNC 601

Query: 686  NPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEH 745
            NPETVSTDYDTSDRLYFEP+T+EDVL ++ +E+P+G+IVQ+GGQTPLKL+          
Sbjct: 602  NPETVSTDYDTSDRLYFEPVTLEDVLEIVRIEKPKGVIVQYGGQTPLKLA---------- 651

Query: 746  RLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEI 805
            R   A+G   V + GTSPD+ID AEDRERF   ++ L ++QP      +   A+  AKEI
Sbjct: 652  RALEAAG---VPVIGTSPDAIDRAEDRERFQHAVERLKLKQPANATVTAIEMAVEKAKEI 708

Query: 806  GYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALA 865
            GYP+VVRPSYVLGGRAMEIVY +  L  Y + AV V  + PVL+D +L DA+E+DVDA+ 
Sbjct: 709  GYPLVVRPSYVLGGRAMEIVYDEADLRRYFQTAVSVSNDAPVLLDHFLDDAVEVDVDAIC 768

Query: 866  DSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMN 925
            D    V+IGGIMEHIEQAGVHSGDSAC +P  T+S    D +     KLA  L V GLMN
Sbjct: 769  DG-EMVLIGGIMEHIEQAGVHSGDSACSLPAYTLSQEIQDVMRQQVQKLAFELQVRGLMN 827

Query: 926  CQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPK 985
             Q+A+  + +VYL+E NPRA+RTVPFVSKA G PLAK AA VM+GKSL + G TKEVIP 
Sbjct: 828  VQFAVKNN-EVYLIEVNPRAARTVPFVSKATGVPLAKVAARVMAGKSLAEQGVTKEVIPP 886

Query: 986  HVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVF 1045
            + SVKE VLPF KF G D LLGPEMRSTGEVMG+  +F  AFAKAQ+ +   +   G   
Sbjct: 887  YYSVKEVVLPFNKFPGVDPLLGPEMRSTGEVMGVGRTFAEAFAKAQLGSNSTMKKHGRAL 946

Query: 1046 LSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVA 1105
            LS+ +  K  +  +A   L  GF++ +T GTA  L   GI    V K+HEGRPH  D + 
Sbjct: 947  LSVREGDKERVVDLAAKLLKQGFELDATHGTAIVLGEAGINPRLVNKVHEGRPHIQDRIK 1006

Query: 1106 NGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRS 1156
            NG+   ++ T+SG    + D   +RR  L YKV   TT++G  A A A+ +
Sbjct: 1007 NGEYTYIINTTSGRRAIE-DSRVIRRSALQYKVHYDTTLNGGFATAMALNA 1056


>gi|300724594|ref|YP_003713919.1| carbamoyl phosphate synthase large subunit [Xenorhabdus nematophila
            ATCC 19061]
 gi|297631136|emb|CBJ91827.1| carbamoyl phosphate synthase, large subunit [Xenorhabdus nematophila
            ATCC 19061]
          Length = 1074

 Score = 1224 bits (3167), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 617/1071 (57%), Positives = 777/1071 (72%), Gaps = 19/1071 (1%)

Query: 86   LGKRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGL 145
            + KRTD++ ILILGAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +
Sbjct: 1    MAKRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEM 60

Query: 146  ADRTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKL 205
            AD TYI P+  E+V +++EKERPDA+LPTMGGQTALN A+ L   G L+++GV +IGA  
Sbjct: 61   ADATYIEPIHWEVVRKIIEKERPDAVLPTMGGQTALNCALELERQGVLDEFGVTMIGATA 120

Query: 206  DAIKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGG 265
            DAI KAEDR  F +AMK IG+ T  SGI +T++E +++A ++G FP IIRP+FT+GGTGG
Sbjct: 121  DAIDKAEDRQRFDKAMKKIGLDTARSGIAHTMEEALAVAEDVG-FPCIIRPSFTMGGTGG 179

Query: 266  GIAYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDP 325
            GIAYN+EEFE IC+ GL  S T+++L+++SL+GWKEYE+EV+RD  DN +I+CSIEN DP
Sbjct: 180  GIAYNREEFEEICERGLDLSPTNELLIDESLIGWKEYEMEVVRDKNDNCIIVCSIENFDP 239

Query: 326  MGVHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIE 385
            MG+HTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGVE GGSNVQFAVNP +G ++VIE
Sbjct: 240  MGIHTGDSITVAPAQTLTDKEYQIMRNASMAVLREIGVETGGSNVQFAVNPKNGRLIVIE 299

Query: 386  MNPRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKI 444
            MNPRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT  +TPASFEPSIDYVVTKI
Sbjct: 300  MNPRVSRSSALASKATGFPIAKIAAKLAVGYTLDELMNDITGGRTPASFEPSIDYVVTKI 359

Query: 445  PRFAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDW 504
            PRF FEKF GS   LTTQMKSVGE MA+GRTFQES QKALR LE G +G+      +   
Sbjct: 360  PRFNFEKFAGSNDRLTTQMKSVGEVMAIGRTFQESLQKALRGLEVGATGFDPKVNLDDPQ 419

Query: 505  DWEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQ 564
               +++  L+    +R+  +  A + G+ VD I  L+ ID+WFL Q +EL+ +E+ +  Q
Sbjct: 420  SLTKIRSELKSAGAERIWYVADAFRAGLSVDGIFNLTNIDRWFLVQIEELVRLEEQVAEQ 479

Query: 565  SVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEAN 624
             V+ +T D    +KR+GF+D  +A     + KEVR+ R    + P YKRVDTCAAEF  +
Sbjct: 480  GVNGLTFDFLRHLKRKGFADAHLAKLAGISGKEVRKLRHDYQLYPVYKRVDTCAAEFSTD 539

Query: 625  TPYMYSSYDFECESAPTQKK-KVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMM 683
            T YMYS+Y+ ECE+ P   K K+++LGGGPNRIGQGIEFDYCC H S +L+  GYETIM+
Sbjct: 540  TAYMYSTYEEECEANPNNDKPKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMV 599

Query: 684  NSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLD 743
            N NPETVSTDYDTSDRLYFEP+T+EDVL ++ +E+P G+IVQ+GGQTPLKL+        
Sbjct: 600  NCNPETVSTDYDTSDRLYFEPVTLEDVLEIVRVEKPTGVIVQYGGQTPLKLA-------- 651

Query: 744  EHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAK 803
              R   A+G   V I GTSPD+ID AEDRERF   +  L ++QP      +   A+   K
Sbjct: 652  --RELEAAG---VPIIGTSPDAIDRAEDRERFQQAVNRLGLKQPANVTVTTIEQAVEKGK 706

Query: 804  EIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDA 863
             IGYP+VVRPSYVLGGRAMEIVY +  L  Y + AV V  + PVL+D++L DAIE+DVDA
Sbjct: 707  AIGYPLVVRPSYVLGGRAMEIVYDETDLRRYFQTAVSVSNDAPVLLDRFLDDAIEVDVDA 766

Query: 864  LADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGL 923
            + D    V+IGGIMEHIEQAGVHSGDSAC +P  T+S    D +     KLA  L V GL
Sbjct: 767  ICDG-ERVLIGGIMEHIEQAGVHSGDSACSLPAYTLSQEIQDVMRQQVEKLAFELRVRGL 825

Query: 924  MNCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVI 983
            MN Q+A+  + +VYL+E NPRA+RTVPFVSKA G PLAK AA VM+G+SL   G  +E+I
Sbjct: 826  MNVQFAVKNN-EVYLIEVNPRAARTVPFVSKATGRPLAKVAARVMAGQSLLKQGAIEEII 884

Query: 984  PKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGT 1043
            P + SVKE VLPF KF G D +LGPEMRSTGEVMG+  +F  AF+KA + +   +   G 
Sbjct: 885  PPYYSVKEVVLPFNKFPGVDPILGPEMRSTGEVMGVGRTFAEAFSKAMLGSNSTMSKQGR 944

Query: 1044 VFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDM 1103
              LS+ +  K  +  +A   L   F++ +T GTA  L   GI    V K+HEGRPH  D 
Sbjct: 945  ALLSVREEDKERIVDLAAKLLKHDFELDATHGTAVVLGEAGINPRLVNKVHEGRPHIQDR 1004

Query: 1104 VANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAI 1154
            + NG+   +V T++G    + D   LRR  L YKV   TT++G  A   A+
Sbjct: 1005 IKNGEYDYIVNTTAGRQAIE-DSKLLRRSALQYKVHYDTTLNGGFATTMAL 1054


>gi|183601001|ref|ZP_02962494.1| hypothetical protein PROSTU_04617 [Providencia stuartii ATCC 25827]
 gi|188019334|gb|EDU57374.1| carbamoyl-phosphate synthase, large subunit [Providencia stuartii
            ATCC 25827]
          Length = 1073

 Score = 1224 bits (3167), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 617/1064 (57%), Positives = 777/1064 (73%), Gaps = 19/1064 (1%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILILGAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  E+V +++EKERPDA+LPTMGGQTALN A+ L   G L ++GV +IGA  DA
Sbjct: 63   ATYIEPIHWEVVRKIIEKERPDAVLPTMGGQTALNCALELERKGVLAEFGVTMIGATADA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  F +AMK IG+ T  SGI + ++E  ++A ++G FP IIRP+FT+GGTGGGI
Sbjct: 123  IDKAEDRQRFDKAMKKIGLDTARSGIAHNMEEAYAVAEDVG-FPCIIRPSFTMGGTGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEFE IC  GL  S T+++L+++SL+GWKEYE+EV+RD  DN +I+CSIEN D MG
Sbjct: 182  AYNREEFEEICTRGLDLSPTNELLIDESLIGWKEYEMEVVRDKNDNCIIVCSIENFDAMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            +HTGDSITVAPAQTLTDKEYQ +RD S+A++REIGVE GGSNVQFAVNP +G ++VIEMN
Sbjct: 242  IHTGDSITVAPAQTLTDKEYQIMRDASMAVLREIGVETGGSNVQFAVNPKNGRLIVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT  +TPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKIAAKLAVGYTLDELMNDITGGRTPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            F FEKF G+   LTTQMKSVGE MA+GRTFQES QKALR LE G +G+     ++     
Sbjct: 362  FNFEKFAGTNDRLTTQMKSVGEVMAIGRTFQESMQKALRGLEFGATGFDPKVSQDDPEAL 421

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
             +++  L+    +R+  I  A + G+ VD I  L+ ID+WFL Q +EL+ +E+ +    +
Sbjct: 422  TRIRRELKDAGAERIWYIADAFRAGLSVDGIFNLTNIDRWFLVQIEELVRLEEQVTELGI 481

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
            + +TK     +KR+GF+D ++A     +E E+R+ R   G+ P YKRVDTCAAEF  +T 
Sbjct: 482  NGLTKTFLSVLKRKGFADARLAKLVGVSEAELRKLRQGYGLHPVYKRVDTCAAEFATDTA 541

Query: 627  YMYSSYDFECESAPT-QKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNS 685
            YMYS+Y+ ECES P   K KV++LGGGPNRIGQGIEFDYCC H S +L+  GYETIM+N 
Sbjct: 542  YMYSTYEDECESNPNFDKPKVMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVNC 601

Query: 686  NPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEH 745
            NPETVSTDYDTSDRLYFEP+T+EDVL ++ +E+P+G+IVQ+GGQTPLKL+          
Sbjct: 602  NPETVSTDYDTSDRLYFEPVTLEDVLEIVRIEQPKGVIVQYGGQTPLKLA---------- 651

Query: 746  RLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEI 805
            R   A+G   V + GTSPD+ID AEDRERF   +  L+++QP+     +   A+  A  I
Sbjct: 652  RALEAAG---VPVIGTSPDAIDRAEDRERFQQAVNRLNLKQPQNATVVTIEQAVEKASGI 708

Query: 806  GYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALA 865
            GYP+VVRPSYVLGGRAMEIVY +  L  Y + AV V  + PVL+D++L DA+E+DVDA+ 
Sbjct: 709  GYPLVVRPSYVLGGRAMEIVYDESDLRRYFQTAVSVSNDAPVLLDRFLDDAVEVDVDAIC 768

Query: 866  DSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMN 925
            D    V+IGGIMEHIEQAGVHSGDSAC +P  T+S    D +      LA  L V GLMN
Sbjct: 769  DG-EMVLIGGIMEHIEQAGVHSGDSACSLPAYTLSQEIQDVMREQVRNLAFELRVRGLMN 827

Query: 926  CQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPK 985
             Q+A+  + +VYL+E NPRA+RTVPFVSKA G PLAK AA VM G+SL + G TKE+IP 
Sbjct: 828  VQFAVKDN-EVYLIEVNPRAARTVPFVSKATGLPLAKIAARVMVGQSLTEQGMTKEIIPP 886

Query: 986  HVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVF 1045
            + SVKE VLPF KFQG D +LGPEMRSTGEVMG+  +F  AFAKA + +   +  SG   
Sbjct: 887  YYSVKEVVLPFNKFQGVDPILGPEMRSTGEVMGVGRTFAEAFAKAMLGSNSTMKKSGRAL 946

Query: 1046 LSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVA 1105
            LS+ +  K  +  +A   L  GF++ +T GTA  L   GI    V K+HEGRPH  D + 
Sbjct: 947  LSVREGDKTRVVDLAAKLLKHGFELDATHGTAIVLGEAGINPRLVNKVHEGRPHIQDRIK 1006

Query: 1106 NGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALA 1149
            NG+   +V T++G    + D   +RR  L YKV   TT++G  A
Sbjct: 1007 NGEYDYIVNTTAGRQAIE-DSKLIRRSALQYKVHYDTTLNGGFA 1049


>gi|167562358|ref|ZP_02355274.1| carbamoyl phosphate synthase large subunit [Burkholderia oklahomensis
            EO147]
          Length = 1088

 Score = 1224 bits (3167), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 633/1091 (58%), Positives = 803/1091 (73%), Gaps = 38/1091 (3%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD+  ILI+GAGPI+IGQACEFDYSG QACKAL+EEGY+VIL+NSNPATIMTDP  AD
Sbjct: 3    KRTDINSILIIGAGPIIIGQACEFDYSGAQACKALREEGYKVILVNSNPATIMTDPNTAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+T E+VE+++EKERPDA+LPTMGGQTALN A+ L   G LEKYGVELIGA   A
Sbjct: 63   VTYIEPITWEVVERIIEKERPDAILPTMGGQTALNCALDLHHHGVLEKYGVELIGASPAA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGE------FPLIIRPAFTLG 261
            I KAEDR  FK AM  IG+ +  SGI ++++E + +  EI        +P +IRP+FTLG
Sbjct: 123  IDKAEDRQKFKDAMTKIGLGSAKSGIAHSMEEALKVHAEIAAATGGSGYPAVIRPSFTLG 182

Query: 262  GTGGGIAYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIE 321
            G+GGGIAYN+EEFE ICK GL  S T ++L+E+SLLGWKEYE+EV+RD ADN +I+CSIE
Sbjct: 183  GSGGGIAYNREEFEEICKRGLDLSPTRELLIEESLLGWKEYEMEVVRDRADNCIIVCSIE 242

Query: 322  NVDPMGVHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEV 381
            N+DPMGVHTGDSITVAPAQTLTDKEYQ LR+ S+A++REIGV+ GGSNVQFA+NP DG +
Sbjct: 243  NLDPMGVHTGDSITVAPAQTLTDKEYQILRNASLAVLREIGVDTGGSNVQFAINPRDGRM 302

Query: 382  MVIEMNPRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYV 440
            +VIEMNPRVSRSSALASKATGFPIAK+AAKL++GY+LD++ N+IT  +TPASFEP+IDYV
Sbjct: 303  VVIEMNPRVSRSSALASKATGFPIAKVAAKLAIGYTLDELKNEITGGQTPASFEPTIDYV 362

Query: 441  VTKIPRFAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVK 500
            VTKIPRFAFEKF  ++  LTTQMKSVGE MA+GRTFQESFQKALR LE G  G     + 
Sbjct: 363  VTKIPRFAFEKFREADSRLTTQMKSVGEVMAIGRTFQESFQKALRGLEVGVDG-----LD 417

Query: 501  ELDWDWEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQF 560
            E     +++   +  P PDR+  +  A + GM  ++I E + ID WFL Q ++++  E+ 
Sbjct: 418  EKTTSSDEIIREIGEPGPDRIWYVGDAFRVGMSREQIFEETAIDPWFLEQIEQIVLKEKA 477

Query: 561  LLTQSVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAE 620
            L  ++++++TKD+ + +K+ GFSD+++A    +T  +VR +RL L V P YKRVDTCAAE
Sbjct: 478  LAGRTLASLTKDELHYLKQSGFSDRRLAKLLGATPADVRARRLELNVRPVYKRVDTCAAE 537

Query: 621  FEANTPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYET 680
            F   T YMYS+Y+ ECE+ PT  KK+++LGGGPNRIGQGIEFDYCC H + +++  GYET
Sbjct: 538  FATKTAYMYSTYEEECEAQPTTNKKIMVLGGGPNRIGQGIEFDYCCVHAALAMREDGYET 597

Query: 681  IMMNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQ 740
            IM+N NPETVSTDYDTSDRLYFEPLT+EDVL ++D E+P G+IVQ+GGQTPLKL+L    
Sbjct: 598  IMVNCNPETVSTDYDTSDRLYFEPLTLEDVLEIVDKEKPVGVIVQYGGQTPLKLALD--- 654

Query: 741  YLDEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALA 800
             L+ H +P         I GTSPD IDAAEDRERF  ++++L + QP    A++E +ALA
Sbjct: 655  -LEAHGVP---------IIGTSPDMIDAAEDRERFQKLLQDLGLRQPPNRTARAEDEALA 704

Query: 801  IAKEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEID 860
            +A+EIGYP+VVRPSYVLGGRAMEIV+    L  Y+  AV+V  + PVL+D++L+DAIE D
Sbjct: 705  LAEEIGYPLVVRPSYVLGGRAMEIVHEPRDLERYMREAVKVSNDSPVLLDRFLNDAIECD 764

Query: 861  VDALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNV 920
            VD + D    V IGG+MEHIEQAGVHSGDSAC +P  ++S   +  +   T  +AK LNV
Sbjct: 765  VDCICDG-DAVFIGGVMEHIEQAGVHSGDSACSLPPYSLSKETVAELKRQTGAMAKALNV 823

Query: 921  CGLMNCQYAI--------TTSGD----VYLLEANPRASRTVPFVSKAIGHPLAKYAALVM 968
             GLMN Q+AI         T G     +Y+LE NPRASRTVP+VSKA   PLAK AA  M
Sbjct: 824  VGLMNVQFAIQQVPADANATDGPKEDIIYVLEVNPRASRTVPYVSKATSLPLAKIAARAM 883

Query: 969  SGKSLNDLGFTKEVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFA 1028
             G++L + G TKEV P + SVKEAV PF KF   D +LGPEMRSTGEVMG+  +F  A  
Sbjct: 884  VGQTLAEQGVTKEVEPPYFSVKEAVFPFIKFPTVDPVLGPEMRSTGEVMGVGTTFGEALF 943

Query: 1029 KAQIAAGQKLPLSGTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVE 1088
            K+Q+AAG +LP SGTV L++ D  KP    +A+   D+G+ +V+T GTA  +E  G+ V+
Sbjct: 944  KSQLAAGSRLPESGTVLLTVMDADKPKAVEVARMLHDLGYPLVATRGTAAAIEAAGVPVK 1003

Query: 1089 RVLKMHEGRPHAGDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGAL 1148
             V K+ +GRPH  DM+ NG+I ++  T         D   +R    A+KV   TT+SGA 
Sbjct: 1004 VVNKVKDGRPHIVDMIKNGEIALVFTTVDETRAAIADSRSIRMSAQAHKVTYYTTMSGAR 1063

Query: 1149 ANAEAIRSLKS 1159
            A  E +R LK+
Sbjct: 1064 AAVEGLRYLKN 1074


>gi|238026779|ref|YP_002911010.1| carbamoyl phosphate synthase large subunit [Burkholderia glumae BGR1]
 gi|237875973|gb|ACR28306.1| carbamoyl phosphate synthase large subunit [Burkholderia glumae BGR1]
          Length = 1084

 Score = 1224 bits (3167), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 631/1086 (58%), Positives = 801/1086 (73%), Gaps = 34/1086 (3%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD+  ILI+GAGPI+IGQACEFDYSG QACKAL+EEGY+VIL+NSNPATIMTDP  AD
Sbjct: 3    KRTDINSILIIGAGPIIIGQACEFDYSGAQACKALREEGYKVILVNSNPATIMTDPNTAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+T E+VE+++ KERPDA+LPTMGGQTALN A+ L   G LEKY VELIGA  +A
Sbjct: 63   VTYIEPITWEVVERIIAKERPDAILPTMGGQTALNCALDLHHHGVLEKYDVELIGASPEA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGE------FPLIIRPAFTLG 261
            I KAEDR  FK+AM  IG+ +  SGI ++++E + +  EI        +P +IRP+FTLG
Sbjct: 123  IDKAEDRQKFKEAMTKIGLGSAKSGIAHSMEEALKVQAEIAAATGGSGYPTVIRPSFTLG 182

Query: 262  GTGGGIAYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIE 321
            G+GGGIAYN+EEFE ICK GL  S T ++L+E+SLLGWKEYE+EV+RD ADN +I+CSIE
Sbjct: 183  GSGGGIAYNREEFEEICKRGLDLSPTRELLIEESLLGWKEYEMEVVRDRADNCIIVCSIE 242

Query: 322  NVDPMGVHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEV 381
            N+DPMGVHTGDSITVAPAQTLTDKEYQ LR+ S+A++REIGV+ GGSNVQF++NP DG +
Sbjct: 243  NLDPMGVHTGDSITVAPAQTLTDKEYQILRNASLAVLREIGVDTGGSNVQFSINPKDGRM 302

Query: 382  MVIEMNPRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYV 440
            +VIEMNPRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ N+IT  +TPASFEP+IDYV
Sbjct: 303  VVIEMNPRVSRSSALASKATGFPIAKVAAKLAVGYTLDELKNEITGGQTPASFEPTIDYV 362

Query: 441  VTKIPRFAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVK 500
            VTKIPRFAFEKF  ++  LTTQMKSVGE MA+GRTFQESFQKALR LE G  G     + 
Sbjct: 363  VTKIPRFAFEKFREADSRLTTQMKSVGEVMAIGRTFQESFQKALRGLEVGVDG-----LD 417

Query: 501  ELDWDWEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQF 560
            E   D +++   +  P PDR+  +  A + G+   +I E + ID WFL Q +++I  EQ 
Sbjct: 418  EKTTDRDEIVREIGEPGPDRIWYVGDAFRVGLSAAQIFEETAIDPWFLAQIEQIILKEQA 477

Query: 561  LLTQSVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAE 620
            L  +++++++KD+ Y +K+ GFSD+++A    ++  EVRE+RL+L V P YKRVDTCAAE
Sbjct: 478  LAGRTLASLSKDELYFLKQSGFSDRRLAKLLGASAAEVRERRLALNVRPVYKRVDTCAAE 537

Query: 621  FEANTPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYET 680
            F   T YMYS+Y+ ECE+ PT  KK+++LGGGPNRIGQGIEFDYCC H + +++  GYET
Sbjct: 538  FATKTAYMYSTYEEECEAQPTDNKKIMVLGGGPNRIGQGIEFDYCCVHAALAMREDGYET 597

Query: 681  IMMNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQ 740
            IM+N NPETVSTDYDTSDRLYFEPLT+EDVL V+D E+P G+IVQ+GGQTPLKL+L +  
Sbjct: 598  IMVNCNPETVSTDYDTSDRLYFEPLTLEDVLEVVDKEKPVGVIVQYGGQTPLKLALDLE- 656

Query: 741  YLDEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALA 800
                     A+G   V I GTSPD IDAAEDRERF  ++++L + QP    A++E++ALA
Sbjct: 657  ---------AAG---VPIVGTSPDMIDAAEDRERFQKLLQDLGLRQPPNRTARAESEALA 704

Query: 801  IAKEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEID 860
            +A EIGYP+VVRPSYVLGGRAMEIV+    L  Y+  AV+V  + PVL+D++L+DAIE D
Sbjct: 705  LADEIGYPLVVRPSYVLGGRAMEIVHEPRDLERYMREAVKVSNDSPVLLDRFLNDAIECD 764

Query: 861  VDALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNV 920
            VD + D    V IGG+MEHIEQAGVHSGDSAC +P  ++S+  +  +   T  +A+ LNV
Sbjct: 765  VDCICDGEA-VFIGGVMEHIEQAGVHSGDSACSLPPYSLSAQTVAELKRQTGAMARALNV 823

Query: 921  CGLMNCQYAI--------TTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKS 972
             GLMN Q+AI        +    +Y+LE NPRASRTVP+VSKA   PLAK AA  M G+ 
Sbjct: 824  VGLMNVQFAIQQVPQADGSKQDVIYVLEVNPRASRTVPYVSKATSLPLAKIAARAMVGQK 883

Query: 973  LNDLGFTKEVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQI 1032
            L   G TKE+ P + SVKEAV PF KF   D +LGPEMRSTGEVMG+  +F  A  K+Q+
Sbjct: 884  LAAQGVTKEIDPPYYSVKEAVFPFVKFPTVDPVLGPEMRSTGEVMGVGRTFGEALFKSQL 943

Query: 1033 AAGQKLPLSGTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLK 1092
            AAG +LP SGTV L++ D  KP    +A+   ++G+ IV+T GTA  +E  G+ V+ V K
Sbjct: 944  AAGSRLPESGTVLLTVMDADKPKAVEVARMLHELGYPIVATRGTAAAIEAAGVPVKVVNK 1003

Query: 1093 MHEGRPHAGDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAE 1152
            + +GRPH  DM+ NG+I ++  T         D   +R    A KV   TT+SGA A  E
Sbjct: 1004 VKDGRPHIVDMIKNGEIALVFTTVDETRTAIADSRSIRMSAQAQKVTYYTTMSGARAAVE 1063

Query: 1153 AIRSLK 1158
             +R LK
Sbjct: 1064 GLRYLK 1069


>gi|320101561|ref|YP_004177152.1| carbamoyl-phosphate synthase large subunit [Isosphaera pallida ATCC
            43644]
 gi|319748843|gb|ADV60603.1| carbamoyl-phosphate synthase large subunit [Isosphaera pallida ATCC
            43644]
          Length = 1083

 Score = 1224 bits (3167), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 626/1092 (57%), Positives = 806/1092 (73%), Gaps = 22/1092 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KR D+  ILI+GAGPIVIGQACEFDYSGTQACKAL+EEG+ V+L+NSNPATIMTDP +AD
Sbjct: 3    KRADIESILIIGAGPIVIGQACEFDYSGTQACKALREEGFRVVLVNSNPATIMTDPEMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
            RTYI P+ PE V  ++  ERPDA+LPT+GGQT LN+A+ALA+ G LE+YG  +IGA  +A
Sbjct: 63   RTYIEPVIPEAVADIIAVERPDAVLPTLGGQTGLNVALALADQGVLERYGCRMIGANAEA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I+KAEDR LFK+ M  IG++   SG+  +L+E  ++ +EIG  P ++RP+FTLGG+GGGI
Sbjct: 123  IRKAEDRQLFKKCMAEIGLECARSGLATSLEEARALRDEIG-LPCVLRPSFTLGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            A+NKEEFE I    L  S    VLVE+S++GWKEYE+EVMRD ADN V++CSIEN DPMG
Sbjct: 182  AFNKEEFERIAAHALELSPVHSVLVEESVIGWKEYEMEVMRDGADNAVVVCSIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTL+DKEYQ LRD S+AI+R IGVE GGSNVQFAV+P  G V+VIEMN
Sbjct: 242  VHTGDSITVAPAQTLSDKEYQTLRDASLAILRAIGVETGGSNVQFAVDPRTGRVLVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRF 447
            PRVSRSSALASKATGFPIAK+AAKL+VGY LD++ NDIT++TPA FEP+IDYVVTK+PR+
Sbjct: 302  PRVSRSSALASKATGFPIAKIAAKLAVGYRLDELRNDITRETPACFEPTIDYVVTKVPRW 361

Query: 448  AFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDW--- 504
            AFEKFP ++P+LTTQMKSVGE MA+GRTF+ES QKALR LE G  G GC           
Sbjct: 362  AFEKFPEADPVLTTQMKSVGEVMAIGRTFRESLQKALRGLEVGRFGLGCDAKDPFGTPEF 421

Query: 505  -DWEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLT 563
               +++K +L  P+ +R+  I  A+  GM V++IH+L+ ID WFL  F +LI+ E+ L  
Sbjct: 422  PTLDRIKETLSTPDANRIWTIRLALLAGMSVEQIHDLTSIDPWFLRHFVDLIERERQLRD 481

Query: 564  QSVSNMTKDDFYE-VKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFE 622
                +   D+     K+ GFSD+Q+A    + E  VR  RL+ G++P YK+VDTCAAEFE
Sbjct: 482  AGSLDRVSDELMRAAKQDGFSDRQLAHLLNTDEIVVRRDRLARGIVPVYKQVDTCAAEFE 541

Query: 623  ANTPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIM 682
            A TPY YS+Y+ E E+    + ++++LGGGPNRIGQGIEFDYCCC  +F+L++ GYE +M
Sbjct: 542  AVTPYYYSTYELEDETRLGDRPRIVVLGGGPNRIGQGIEFDYCCCQAAFALRADGYEVVM 601

Query: 683  MNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYL 742
            +NSNPETVSTDYDTSD+L+FEPLTVEDVLN+ +  +P G++VQFGGQTPL L+       
Sbjct: 602  VNSNPETVSTDYDTSDQLFFEPLTVEDVLNICERVKPIGLVVQFGGQTPLNLA------- 654

Query: 743  DEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIA 802
               R   A+G   V I GTSP+SID AEDR+RF+ ++  L + Q   G A    +A  IA
Sbjct: 655  ---RALEAAG---VPILGTSPESIDLAEDRDRFSQVLARLGLRQTPNGSAVKVEEAARIA 708

Query: 803  KEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVD 862
              IGYPV+VRPS+VLGGRAMEIVY + +L+ Y+  AV+V  +RPVLIDK+L DA+E+DVD
Sbjct: 709  ATIGYPVLVRPSFVLGGRAMEIVYDESSLLKYMNEAVDVSSDRPVLIDKFLEDAVEVDVD 768

Query: 863  ALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCG 922
            A+ D+ G VV+ G+MEHIE+AG+HSGDSAC IP   +    +  I   T  LA  L V G
Sbjct: 769  AVRDATGVVVVAGVMEHIEEAGIHSGDSACAIPPHNLPPEIIAEIKRQTRLLADALEVKG 828

Query: 923  LMNCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEV 982
            LMN Q+A+   G VY+LEANPRASRTVPFVSKA G  LAK AA VM+G++L +LG   + 
Sbjct: 829  LMNLQFAV-KDGQVYVLEANPRASRTVPFVSKATGLNLAKVAARVMTGRTLAELGVVDDP 887

Query: 983  IPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLS- 1041
            +P  VSVKE+V PF KF G D++LGPEMRSTGEVMG+D SF  AFAKAQ+AAG  LP   
Sbjct: 888  VPGFVSVKESVFPFAKFTGVDIVLGPEMRSTGEVMGVDRSFAAAFAKAQMAAGTTLPRQG 947

Query: 1042 GTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAG 1101
            GTVF+S+ +  +P +  IA+   D+GF +++T+GTA  L+  G++VE V K+HEGRP+  
Sbjct: 948  GTVFVSVANRDRPAIVPIARKLADLGFHLMATAGTARVLQSHGVSVEVVRKIHEGRPNLL 1007

Query: 1102 DMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNT 1161
            D +AN +I ++V T SG      +G ++R   +++ VP ITT++ A A   A+  L+   
Sbjct: 1008 DHLANDRIDLIVNTPSGKGARTDEG-RIRASAVSHGVPCITTLAAARAAVSAMERLRDGG 1066

Query: 1162 VTMTALQDFFDV 1173
            +T+ ALQD  ++
Sbjct: 1067 LTVYALQDLLNL 1078


>gi|283835095|ref|ZP_06354836.1| carbamoyl-phosphate synthase, large subunit [Citrobacter youngae ATCC
            29220]
 gi|291069392|gb|EFE07501.1| carbamoyl-phosphate synthase, large subunit [Citrobacter youngae ATCC
            29220]
          Length = 1074

 Score = 1224 bits (3167), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 618/1078 (57%), Positives = 782/1078 (72%), Gaps = 19/1078 (1%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILILGAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  E+V +++EKERPDA+LPTMGGQTALN A+ L   G LE++GV +IGA  DA
Sbjct: 63   ATYIEPIHWEVVRKIIEKERPDAVLPTMGGQTALNCALELERQGVLEEFGVTMIGATADA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  F  AMK IG+ T  SGI +T++E +++A ++G FP IIRP+FT+GGTGGGI
Sbjct: 123  IDKAEDRRRFDIAMKKIGLDTARSGIAHTMEEALAVAADVG-FPCIIRPSFTMGGTGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEFE IC+ GL  S T+++L+++SL+GWKEYE+EV+RD  DN +I+CSIEN D MG
Sbjct: 182  AYNREEFEEICERGLDLSPTNELLIDESLIGWKEYEMEVVRDKNDNCIIVCSIENFDAMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            +HTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGVE GGSNVQFAVNP +G ++VIEMN
Sbjct: 242  IHTGDSITVAPAQTLTDKEYQIMRNASMAVLREIGVETGGSNVQFAVNPKNGRLIVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT  +TPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGYTLDELMNDITGGRTPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            F FEKF G+   LTTQMKSVGE MA+GRT QES QKALR LE G +G+      +     
Sbjct: 362  FNFEKFVGANDRLTTQMKSVGEVMAIGRTQQESLQKALRGLEVGATGFDPKVSLDDPEAL 421

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
             +++  L+    +R+  I  A + G+ VD +  L+ ID+WFL Q +EL+ +E+ +    +
Sbjct: 422  TKIRRELKDAGAERIWYIADAFRAGLSVDGVFNLTNIDRWFLVQIEELVRLEEKVTEVGI 481

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
            + +  D    +KR+GF+D ++A      E E+R+ R    + P YKRVDTCAAEF  +T 
Sbjct: 482  NGLDADFLRVLKRKGFADARLAKLAGVREAEIRKLREQYNLHPVYKRVDTCAAEFATDTA 541

Query: 627  YMYSSYDFECESAPT-QKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNS 685
            YMYS+Y+ ECE+ P+  + K+++LGGGPNRIGQGIEFDYCC H S +L+  GYETIM+N 
Sbjct: 542  YMYSTYEDECEANPSVDRDKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVNC 601

Query: 686  NPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEH 745
            NPETVSTDYDTSDRLYFEP+T+EDVL ++ +E+P+G+IVQ+GGQTPLKL+          
Sbjct: 602  NPETVSTDYDTSDRLYFEPVTLEDVLEIVRIEKPKGVIVQYGGQTPLKLA---------- 651

Query: 746  RLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEI 805
            R   A+G   V + GTSPD+ID AEDRERF   +  L ++QP      +   A+  AKEI
Sbjct: 652  RALEAAG---VPVIGTSPDAIDRAEDRERFQQAVDRLKLKQPANATVTAIEQAVEKAKEI 708

Query: 806  GYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALA 865
            GYP+VVRPSYVLGGRAMEIVY +  L  Y + AV V  + PVL+D++L DA+E+DVDA+ 
Sbjct: 709  GYPLVVRPSYVLGGRAMEIVYDEADLRRYFQTAVSVSNDAPVLLDRFLDDAVEVDVDAIC 768

Query: 866  DSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMN 925
            D    V+IGGIMEHIEQAGVHSGDSAC +P  T+S    D +     KLA  L V GLMN
Sbjct: 769  DG-EMVLIGGIMEHIEQAGVHSGDSACSLPAYTLSQEIQDVMRQQVQKLAFELQVRGLMN 827

Query: 926  CQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPK 985
             Q+A+  + +VYL+E NPRA+RTVPFVSKA G PLAK AA VM+GK+L   G TKEVIP 
Sbjct: 828  VQFAVKNN-EVYLIEVNPRAARTVPFVSKATGVPLAKVAARVMAGKTLAQQGVTKEVIPP 886

Query: 986  HVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVF 1045
            + SVKE VLPF KF G D LLGPEMRSTGEVMG+  +F  AFAKAQ+ +   +   G   
Sbjct: 887  YYSVKEVVLPFNKFPGVDPLLGPEMRSTGEVMGVGRTFAEAFAKAQLGSSSTMKKQGRAL 946

Query: 1046 LSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVA 1105
            LS+ +  K  +  +A   L  GF++ +T GTA  L   GI    V K+HEGRPH  D + 
Sbjct: 947  LSVREGDKERVVDLAAKLLKFGFELDATHGTAIVLGEAGINPRLVNKVHEGRPHIQDRIK 1006

Query: 1106 NGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTVT 1163
            NG+   ++ T+ G    + D   +RR  L YKV   TT++G  A A A+ +  +  VT
Sbjct: 1007 NGEYTYIINTTEGRQAIE-DSKLIRRSALQYKVHYDTTLNGGFATAMALNADATEKVT 1063


>gi|1750392|gb|AAB39256.1| carbamoylphosphate synthetase large subunit [Salmonella enterica
            subsp. enterica serovar Typhimurium]
          Length = 1075

 Score = 1224 bits (3167), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 616/1078 (57%), Positives = 783/1078 (72%), Gaps = 19/1078 (1%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILILGAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  E+V +++EKERPDA+LPTMGGQTALN A+ L   G LE++GV +IGA  DA
Sbjct: 63   ATYIEPIHWEVVRKIIEKERPDAVLPTMGGQTALNCALELERQGVLEEFGVTMIGATADA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
              KAEDR  F  AMK IG+ T  SGI +T++E +++A ++G FP IIRP+FT+GGTGGGI
Sbjct: 123  GDKAEDRRRFDIAMKKIGLDTARSGIAHTMEEALAVAADVG-FPCIIRPSFTMGGTGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEFE IC+ GL  S T+++L+++SL+GWKEYE+EV+RD  DN +I+CSIEN D MG
Sbjct: 182  AYNREEFEEICERGLDLSPTNELLIDESLIGWKEYEMEVVRDKNDNCIIVCSIENFDAMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            +HTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGVE GGSNVQFAVNP +G ++VIEMN
Sbjct: 242  IHTGDSITVAPAQTLTDKEYQIMRNASMAVLREIGVETGGSNVQFAVNPKNGRLIVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT  +TPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGYTLDELMNDITGGRTPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            F FEKF G+   LTTQMKSVGE MA+GRT QES QKALR LE G +G+      +     
Sbjct: 362  FNFEKFAGANDRLTTQMKSVGEVMAIGRTQQESLQKALRGLEVGATGFDPKVSLDDPEAL 421

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
             +++  L+    DR+  I  A + G+ VD +  L+ ID+WFL Q +EL+ +E+ +    +
Sbjct: 422  TKIRRELKDAGADRIWYIADAFRAGLSVDGVFNLTNIDRWFLVQIEELVRLEEKVAEVGI 481

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
            + +  D   ++KR+GF+D ++A      E E+R+ R    + P YKRVDTCAAEF  +T 
Sbjct: 482  TGLNADFLRQLKRKGFADARLAKLAGVREAEIRKLRDQYDLHPVYKRVDTCAAEFATDTA 541

Query: 627  YMYSSYDFECESAPT-QKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNS 685
            YMYS+Y+ ECE+ P+  + K+++LGGGPNRIGQGIEFDYCC H S +L+  GYETIM+N 
Sbjct: 542  YMYSTYEDECEANPSIDRDKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVNC 601

Query: 686  NPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEH 745
            NPETVSTDYDTSDRLYFEP+T+EDVL ++ +E+P+G+IVQ+GGQTPLKL+          
Sbjct: 602  NPETVSTDYDTSDRLYFEPVTLEDVLEIVRIEKPKGVIVQYGGQTPLKLA---------- 651

Query: 746  RLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEI 805
            R   A+G   V + GTSPD+ID AEDRERF   +  L ++QP      +   A+  AKEI
Sbjct: 652  RALEAAG---VPVIGTSPDAIDRAEDRERFQHAVDRLKLKQPANATVTAIEQAVEKAKEI 708

Query: 806  GYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALA 865
            GYP+VVRPSYVLGGRAMEIVY +  L  Y + AV V  + PVL+D++L DA+E+DVDA+ 
Sbjct: 709  GYPLVVRPSYVLGGRAMEIVYDEADLRRYFQTAVSVSNDAPVLLDRFLDDAVEVDVDAIC 768

Query: 866  DSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMN 925
            D    V+IGGIMEHIEQAGVHSGDSAC +P  T+S    D +     KLA  L V GLMN
Sbjct: 769  DG-EMVLIGGIMEHIEQAGVHSGDSACSLPAYTLSQEIQDVMRQQVQKLAFELQVRGLMN 827

Query: 926  CQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPK 985
             Q+A+  + +VYL+E NPRA+RTVPFVSKA G PLAK AA VM+GKSL + G T+E+IP 
Sbjct: 828  VQFAVKDN-EVYLIEVNPRAARTVPFVSKATGVPLAKVAARVMAGKSLTEQGVTQEIIPP 886

Query: 986  HVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVF 1045
            + SVKE VLPF KF G D LLGPEMRSTGEVMG+  +F  AFAKAQ+ +   +   G   
Sbjct: 887  YYSVKEVVLPFNKFPGVDPLLGPEMRSTGEVMGVGRTFAEAFAKAQLGSNSTMKKQGRAL 946

Query: 1046 LSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVA 1105
            LS+ +  K  +  +A   L  GF++ +T GTA  L   GI    V K+HEGRPH  D + 
Sbjct: 947  LSVREGDKERVVDLAAKLLKQGFELDATHGTAIVLGEAGINPRLVNKVHEGRPHIQDRIK 1006

Query: 1106 NGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTVT 1163
            NG+   ++ T++G    + D   +RR  L YKV   TT++G  A   A+ +  +  VT
Sbjct: 1007 NGEYTYIINTTAGRRAIE-DSRVIRRSALQYKVHYDTTLNGGFATTMALNADATEKVT 1063


>gi|340777113|ref|ZP_08697056.1| carbamoyl phosphate synthase large subunit [Acetobacter aceti NBRC
            14818]
          Length = 1084

 Score = 1224 bits (3167), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 628/1099 (57%), Positives = 791/1099 (71%), Gaps = 34/1099 (3%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD+R ILI+GAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDPGLAD
Sbjct: 3    KRTDIRSILIIGAGPIVIGQACEFDYSGAQACKALREEGYRVILLNSNPATIMTDPGLAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+TPE VE+++ KE+PDA+LPTMGGQTALN A+AL  SG L K+ VELIGAK D 
Sbjct: 63   ATYIEPITPEFVERIILKEKPDAILPTMGGQTALNAAMALDASGFLVKHNVELIGAKADV 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I +AEDR  F++AM  IG+++P S I +TL+E       +G  P IIRP+FT+GG GGGI
Sbjct: 123  IDRAEDRQKFREAMDAIGIESPKSFIAHTLEEARDALKNVG-LPAIIRPSFTMGGAGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYNKEEF+ I   GL AS T++VLVE+S+LGWKE+E+EV+RD ADN +I+CSIEN+DPMG
Sbjct: 182  AYNKEEFDQIVTGGLDASPTTEVLVEESVLGWKEFEMEVVRDKADNCIIVCSIENIDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPA TLTDKEYQR+RD SIA +R IGVE GGSNVQF VNP DG ++VIEMN
Sbjct: 242  VHTGDSITVAPALTLTDKEYQRMRDASIACLRAIGVETGGSNVQFGVNPKDGRMVVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRF 447
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT  TPASFEP+IDYVV KIPRF
Sbjct: 302  PRVSRSSALASKATGFPIAKIAAKLAVGYTLDELTNDITGSTPASFEPTIDYVVVKIPRF 361

Query: 448  AFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDWE 507
             FEKFPG+  LL+T MKSVGEAMA+GR+F E+ QK LRS+E G  G         D   +
Sbjct: 362  TFEKFPGTPALLSTSMKSVGEAMAIGRSFPEALQKGLRSMETGLVGLDPVEAPG-DGGVD 420

Query: 508  QLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSVS 567
              +  L  P P+R+     A++ G  VDEI      + WFL + ++++  E+ +L + + 
Sbjct: 421  AFRAELSQPRPERILMAAQALRAGFSVDEIAAACKFEPWFLRELEKIVQAEKEVLDKGLP 480

Query: 568  NMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTPY 627
               +     +K  GFSD Q+A  + +  KEV   R   GV P YKR+DTCA EF + TPY
Sbjct: 481  EDAQ-GLRRLKAMGFSDVQLARLSGTQAKEVTALREKAGVKPVYKRIDTCAGEFASATPY 539

Query: 628  MYSSYDFE-----CESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIM 682
            MYS+Y+       CES PT +KKV+ILGGGPNRIGQGIEFDYCC H +++L+ AG ETIM
Sbjct: 540  MYSTYENRFGQPVCESDPTSRKKVVILGGGPNRIGQGIEFDYCCVHAAYALREAGLETIM 599

Query: 683  MNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPE----GIIVQFGGQTPLKLSLPI 738
            +N NPETVSTDYDTSDRLYFEPLT EDV+ +I  E+      G IVQ+GGQTPLKLS   
Sbjct: 600  VNCNPETVSTDYDTSDRLYFEPLTGEDVVALIRREQETGEVLGCIVQYGGQTPLKLS--- 656

Query: 739  HQYLDEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADA 798
             + L+E  +P         + GT  D+ID AEDRERF A++++L + QP  GIA+S A+A
Sbjct: 657  -RALEEAGIP---------LLGTPADAIDRAEDRERFQALLRKLGLRQPANGIARSPAEA 706

Query: 799  LAIAKEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVD----PERPVLIDKYLS 854
              IA++IGYPVVVRPSYVLGGRAMEIVY   +L  Y++ A+++        PVLID YL+
Sbjct: 707  EDIAEQIGYPVVVRPSYVLGGRAMEIVYDRASLQRYMKVALQLAGAEVANGPVLIDHYLN 766

Query: 855  DAIEIDVDALADSCGN-VVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIK 913
            DAIE DVD +AD  GN V + G+MEHIE+AG+HSGDSAC +P  T+S + +  + + T  
Sbjct: 767  DAIEADVDCIAD--GNEVYVAGVMEHIEEAGIHSGDSACALPPYTLSPAIVTELKAQTEA 824

Query: 914  LAKRLNVCGLMNCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSL 973
            +A+ L + GLMN QYAI    D+++LE NPRASRTVPFV+KA G P+AK  A VM+G  L
Sbjct: 825  MARELGIVGLMNVQYAIKGQ-DIFVLEVNPRASRTVPFVAKATGVPVAKIGARVMAGAKL 883

Query: 974  NDLGFTKEVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIA 1033
            ++       +  HV+VKEAV PF +FQ  D +LGPEMRSTGEVMG+D SF  AFAK+Q+A
Sbjct: 884  SEFTLDDRAVVPHVAVKEAVFPFHRFQDVDTILGPEMRSTGEVMGLDTSFERAFAKSQLA 943

Query: 1034 AGQKLPLSGTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKM 1093
            AG KLP+SG +FLS+ D  K HL R+ +   D+GF I++T GTA  L   GI V+ V K+
Sbjct: 944  AGVKLPMSGAIFLSVRDGDKAHLPRLGRMLADMGFTILATRGTAKCLSDAGIEVKIVNKV 1003

Query: 1094 HEGRPHAGDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEA 1153
             EGRPH  D + +G++QM++ T  G    + D   +RR  L   VP  TT++GA A   A
Sbjct: 1004 LEGRPHCVDAIRSGEVQMVINTVQGGQSVK-DSYDIRRSALTMGVPNFTTMAGARAAIHA 1062

Query: 1154 IRSLKSNTVTMTALQDFFD 1172
            I +++   + +  LQ +F+
Sbjct: 1063 IAAMREGPLEVAPLQSYFN 1081


>gi|260596463|ref|YP_003209034.1| carbamoyl phosphate synthase large subunit [Cronobacter turicensis
            z3032]
 gi|260215640|emb|CBA27925.1| Carbamoyl-phosphate synthase large chain [Cronobacter turicensis
            z3032]
          Length = 1074

 Score = 1224 bits (3167), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 615/1078 (57%), Positives = 785/1078 (72%), Gaps = 19/1078 (1%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILILGAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  E+V +++EKERPDA+LPTMGGQTALN A+ L   G L ++GV +IGA  DA
Sbjct: 63   ATYIEPIHWEVVRKIIEKERPDAVLPTMGGQTALNCALELERQGVLAEFGVTMIGATADA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  F  AMK IG+ T  SGI + ++E +++A ++G +P IIRP+FT+GGTGGGI
Sbjct: 123  IDKAEDRRRFDVAMKKIGLDTARSGIAHNMEEALAVAADVG-YPCIIRPSFTMGGTGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEFE IC  GL  S T ++L+++SL+GWKEYE+EV+RD  DN +I+CSIEN D MG
Sbjct: 182  AYNREEFEEICARGLDLSPTKELLIDESLIGWKEYEMEVVRDKNDNCIIVCSIENFDAMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            +HTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGVE GGSNVQFAVNP +G ++VIEMN
Sbjct: 242  IHTGDSITVAPAQTLTDKEYQIMRNASMAVLREIGVETGGSNVQFAVNPKNGRLIVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT  +TPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGYTLDELMNDITGGRTPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            F FEKF G+   LTTQMKSVGE MA+GRT QES QKALR LE G +G+      +     
Sbjct: 362  FNFEKFAGANDRLTTQMKSVGEVMAIGRTQQESMQKALRGLEVGATGFDPKVSLDDPEAL 421

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
             +++  L+    +R+  I  A + G+ VD +  L+ ID+WFL Q +EL+ +E+ +  Q +
Sbjct: 422  TKIRRELKDAGAERIWYIADAFRAGLSVDGVFNLTNIDRWFLVQIEELVRLEEQVAEQGI 481

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
            + ++ D    +KR+GF+D ++A     +E E+R+ R    + P YKRVDTCAAEF  +T 
Sbjct: 482  NGLSADFLRMLKRKGFADARLAKLAGVSESEIRKLREQYKLHPVYKRVDTCAAEFSTDTA 541

Query: 627  YMYSSYDFECESAPTQ-KKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNS 685
            YMYS+Y+ ECE+ P Q ++K+++LGGGPNRIGQGIEFDYCC H + +L+  GYETIM+N 
Sbjct: 542  YMYSTYEEECEANPNQDREKIMVLGGGPNRIGQGIEFDYCCVHAALALREDGYETIMVNC 601

Query: 686  NPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEH 745
            NPETVSTDYDTSDRLYFEP+T+EDVL ++ +E+P+G+IVQ+GGQTPLKL+          
Sbjct: 602  NPETVSTDYDTSDRLYFEPVTLEDVLEIVRIEKPKGVIVQYGGQTPLKLA---------- 651

Query: 746  RLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEI 805
            R   A+G   V + GTSPD+ID AEDRERF   +  L ++QP      +   A+  AKEI
Sbjct: 652  RALEAAG---VPVIGTSPDAIDRAEDRERFQQAVDRLKLKQPANATVTAIEMAVEKAKEI 708

Query: 806  GYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALA 865
            GYP+VVRPSYVLGGRAMEIVY +  L  Y + AV V  + PVL+D++L DA+E+DVDA+ 
Sbjct: 709  GYPLVVRPSYVLGGRAMEIVYDEVDLRRYFQTAVSVSNDAPVLLDRFLDDAVEVDVDAIC 768

Query: 866  DSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMN 925
            D    V+IGGIMEHIEQAGVHSGDSAC +P  T+S    D +     KLA  L V GLMN
Sbjct: 769  DG-EMVLIGGIMEHIEQAGVHSGDSACSLPAYTLSQEIQDVMRQQVQKLAFELQVRGLMN 827

Query: 926  CQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPK 985
             Q+A+  + +VYL+E NPRA+RTVPFVSKA G PLAK AA VM+GK+L++ G TKE+IP 
Sbjct: 828  VQFAVKDN-EVYLIEVNPRAARTVPFVSKATGVPLAKVAARVMAGKTLSEQGVTKEIIPP 886

Query: 986  HVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVF 1045
            + SVKE VLPF KF G D LLGPEMRSTGEVMG+  +F  AFAKAQ+ +   +   G   
Sbjct: 887  YYSVKEVVLPFNKFPGVDPLLGPEMRSTGEVMGVGRTFAEAFAKAQLGSNSTMKKQGRAL 946

Query: 1046 LSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVA 1105
            LS+ +  K  +  +A   L  GF++ +T GTA  L   GI    V K+HEGRPH  D + 
Sbjct: 947  LSVREGDKERVVDLAAKLLKYGFELDATHGTAIVLGEAGINPRLVNKVHEGRPHIQDRIK 1006

Query: 1106 NGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTVT 1163
            NG+   ++ T++G    + D   +RR  L YKV   TT++G  A A A+ +  +  VT
Sbjct: 1007 NGEYTYIINTTAGRQAIE-DSKLIRRSALQYKVHYDTTLNGGFATAMALNADATEKVT 1063


>gi|331645139|ref|ZP_08346250.1| carbamoyl-phosphate synthase, large subunit [Escherichia coli M605]
 gi|387828089|ref|YP_003348026.1| carbamoyl-phosphate synthase large subunit [Escherichia coli SE15]
 gi|417660664|ref|ZP_12310245.1| carbamoyl-phosphate synthase large chain [Escherichia coli AA86]
 gi|432395872|ref|ZP_19638665.1| carbamoyl-phosphate synthase large chain [Escherichia coli KTE25]
 gi|432404912|ref|ZP_19647636.1| carbamoyl-phosphate synthase large chain [Escherichia coli KTE28]
 gi|432498324|ref|ZP_19740105.1| carbamoyl-phosphate synthase large chain [Escherichia coli KTE216]
 gi|432692709|ref|ZP_19927931.1| carbamoyl-phosphate synthase large chain [Escherichia coli KTE162]
 gi|432721626|ref|ZP_19956555.1| carbamoyl-phosphate synthase large chain [Escherichia coli KTE17]
 gi|432726036|ref|ZP_19960925.1| carbamoyl-phosphate synthase large chain [Escherichia coli KTE18]
 gi|432739804|ref|ZP_19974527.1| carbamoyl-phosphate synthase large chain [Escherichia coli KTE23]
 gi|432892599|ref|ZP_20104766.1| carbamoyl-phosphate synthase large chain [Escherichia coli KTE165]
 gi|432916943|ref|ZP_20121682.1| carbamoyl-phosphate synthase large chain [Escherichia coli KTE173]
 gi|432924173|ref|ZP_20126592.1| carbamoyl-phosphate synthase large chain [Escherichia coli KTE175]
 gi|432979409|ref|ZP_20168199.1| carbamoyl-phosphate synthase large chain [Escherichia coli KTE211]
 gi|432988970|ref|ZP_20177643.1| carbamoyl-phosphate synthase large chain [Escherichia coli KTE217]
 gi|433094905|ref|ZP_20281132.1| carbamoyl-phosphate synthase large chain [Escherichia coli KTE139]
 gi|433104208|ref|ZP_20290234.1| carbamoyl-phosphate synthase large chain [Escherichia coli KTE148]
 gi|433109205|ref|ZP_20295089.1| carbamoyl-phosphate synthase large chain [Escherichia coli KTE150]
 gi|281177246|dbj|BAI53576.1| carbamoyl-phosphate synthase large subunit [Escherichia coli SE15]
 gi|330909882|gb|EGH38392.1| carbamoyl-phosphate synthase large chain [Escherichia coli AA86]
 gi|331045896|gb|EGI18015.1| carbamoyl-phosphate synthase, large subunit [Escherichia coli M605]
 gi|430918894|gb|ELC39845.1| carbamoyl-phosphate synthase large chain [Escherichia coli KTE25]
 gi|430933137|gb|ELC53548.1| carbamoyl-phosphate synthase large chain [Escherichia coli KTE28]
 gi|431032769|gb|ELD45475.1| carbamoyl-phosphate synthase large chain [Escherichia coli KTE216]
 gi|431238164|gb|ELF33103.1| carbamoyl-phosphate synthase large chain [Escherichia coli KTE162]
 gi|431268839|gb|ELF60200.1| carbamoyl-phosphate synthase large chain [Escherichia coli KTE17]
 gi|431277284|gb|ELF68298.1| carbamoyl-phosphate synthase large chain [Escherichia coli KTE18]
 gi|431287176|gb|ELF77994.1| carbamoyl-phosphate synthase large chain [Escherichia coli KTE23]
 gi|431426020|gb|ELH08065.1| carbamoyl-phosphate synthase large chain [Escherichia coli KTE165]
 gi|431448898|gb|ELH29610.1| carbamoyl-phosphate synthase large chain [Escherichia coli KTE173]
 gi|431450662|gb|ELH31147.1| carbamoyl-phosphate synthase large chain [Escherichia coli KTE175]
 gi|431498947|gb|ELH78129.1| carbamoyl-phosphate synthase large chain [Escherichia coli KTE211]
 gi|431499870|gb|ELH78887.1| carbamoyl-phosphate synthase large chain [Escherichia coli KTE217]
 gi|431620963|gb|ELI89785.1| carbamoyl-phosphate synthase large chain [Escherichia coli KTE139]
 gi|431633367|gb|ELJ01647.1| carbamoyl-phosphate synthase large chain [Escherichia coli KTE150]
 gi|431634926|gb|ELJ03142.1| carbamoyl-phosphate synthase large chain [Escherichia coli KTE148]
          Length = 1073

 Score = 1224 bits (3167), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 617/1071 (57%), Positives = 781/1071 (72%), Gaps = 19/1071 (1%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILILGAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  E+V +++EKERPDA+LPTMGGQTALN A+ L   G LE++GV +IGA  DA
Sbjct: 63   ATYIEPIHWEVVRKIIEKERPDAVLPTMGGQTALNCALELERQGVLEEFGVTMIGATADA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  F  AMK IG++T  SGI ++++E +++A E+G FP IIRP+FT+GG+GGGI
Sbjct: 123  IDKAEDRRRFDVAMKKIGLETARSGIAHSMEEALAVAAEVG-FPCIIRPSFTMGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEFE IC  GL  S T ++L+++SL+GWKEYE+EV+RD  DN +I+CSIEN D MG
Sbjct: 182  AYNREEFEEICARGLDLSPTKELLIDESLIGWKEYEMEVVRDKNDNCIIVCSIENFDAMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            +HTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGVE GGSNVQFAVNP +G ++VIEMN
Sbjct: 242  IHTGDSITVAPAQTLTDKEYQIMRNASMAVLREIGVETGGSNVQFAVNPKNGRLIVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT  +TPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGYTLDELMNDITGGRTPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            F FEKF G+   LTTQMKSVGE MA+GRT QES QKALR LE G +G+      +     
Sbjct: 362  FNFEKFAGANDRLTTQMKSVGEVMAIGRTQQESLQKALRGLEVGATGFDPKVSLDDPEAL 421

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
             +++  L+    +R+  I  A + G+ VD +  L+ ID+WFL Q +EL+ +E+ +    +
Sbjct: 422  TKIRRELKDAGAERIWYIADAFRAGLSVDGVFNLTNIDRWFLVQIEELVRLEEKVAEVGI 481

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
            + +  +   ++KR+GF+D ++A      E E+R+ R    + P YKRVDTCAAEF  +T 
Sbjct: 482  TGLNAEFLRQLKRKGFADARLAKLAGVREAEIRKLRDQYDLHPVYKRVDTCAAEFATDTA 541

Query: 627  YMYSSYDFECESAP-TQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNS 685
            YMYS+Y+ ECE+ P T ++K+++LGGGPNRIGQGIEFDYCC H S +L+  GYETIM+N 
Sbjct: 542  YMYSTYEEECEANPSTDREKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVNC 601

Query: 686  NPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEH 745
            NPETVSTDYDTSDRLYFEP+T+EDVL ++ +E+P+G+IVQ+GGQTPLKL+          
Sbjct: 602  NPETVSTDYDTSDRLYFEPVTLEDVLEIVRIEKPKGVIVQYGGQTPLKLA---------- 651

Query: 746  RLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEI 805
            R   A+G   V + GTSPD+ID AEDRERF   +  L ++QP      +   A+  AKEI
Sbjct: 652  RALEAAG---VPVIGTSPDAIDRAEDRERFQHAVDRLKLKQPANATVTTIEMAVEKAKEI 708

Query: 806  GYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALA 865
            GYP+VVRPSYVLGGRAMEIVY +  L  Y + AV V  + PVL+D +L DA+E+DVDA+ 
Sbjct: 709  GYPLVVRPSYVLGGRAMEIVYDEADLRRYFQTAVSVSNDAPVLLDHFLDDAVEVDVDAIC 768

Query: 866  DSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMN 925
            D    V+IGGIMEHIEQAGVHSGDSAC +P  T+S    D +     KLA  L V GLMN
Sbjct: 769  DG-EMVLIGGIMEHIEQAGVHSGDSACSLPAYTLSQEIQDVMRQQVQKLAFELQVRGLMN 827

Query: 926  CQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPK 985
             Q+A+  + +VYL+E NPRA+RTVPFVSKA G PLAK AA VM+GKSL + G TKEVIP 
Sbjct: 828  VQFAVKNN-EVYLIEVNPRAARTVPFVSKATGVPLAKVAARVMAGKSLAEQGVTKEVIPP 886

Query: 986  HVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVF 1045
            + SVKE VLPF KF G D LLGPEMRSTGEVMG+  +F  AFAKAQ+ +   +   G   
Sbjct: 887  YYSVKEVVLPFNKFPGVDPLLGPEMRSTGEVMGVGRTFAEAFAKAQLGSNSTMKKHGRAL 946

Query: 1046 LSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVA 1105
            LS+ +  K  +  +A   L  GF++ +T GTA  L   GI    V K+HEGRPH  D + 
Sbjct: 947  LSVREGDKERVVDLAAKLLKQGFELDATHGTAIVLGEAGINPRLVNKVHEGRPHIQDRIK 1006

Query: 1106 NGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRS 1156
            NG+   ++ T+SG    + D   +RR  L YKV   TT++G  A A A+ +
Sbjct: 1007 NGEYTYIINTTSGRRAIE-DSRVIRRSALQYKVHYDTTLNGGFATAMALNA 1056


>gi|24372725|ref|NP_716767.1| carbamoyl-phosphate synthase large subunit CarB [Shewanella
            oneidensis MR-1]
 gi|24346791|gb|AAN54212.1| carbamoyl-phosphate synthase large subunit CarB [Shewanella
            oneidensis MR-1]
          Length = 1074

 Score = 1224 bits (3167), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 613/1077 (56%), Positives = 776/1077 (72%), Gaps = 18/1077 (1%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILILGAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  E+V  ++ KERPDA+LPTMGGQTALN A+ L   G L ++ VE+IGA  DA
Sbjct: 63   ATYIEPIQWEVVRNIIAKERPDAILPTMGGQTALNCALELEAKGVLAEFNVEMIGATADA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  F +AMK+IG++ P +GI ++++E   +  ++G FP IIRP+FT+GG+GGGI
Sbjct: 123  IDKAEDRSRFDKAMKSIGLECPRAGIAHSMEEAYGVLEQVG-FPCIIRPSFTMGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYNKEEFE IC  GL  S T ++L+++SL+GWKEYE+EV+RD  DN +I+CSIEN DPMG
Sbjct: 182  AYNKEEFEEICSQGLDLSPTKELLIDESLIGWKEYEMEVVRDRNDNCIIVCSIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGVE GGSNVQF +NP DG +++IEMN
Sbjct: 242  VHTGDSITVAPAQTLTDKEYQIMRNASMAVLREIGVETGGSNVQFGINPKDGRMVIIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VG++LD++ NDIT  +TPASFEP+IDYVVTK+PR
Sbjct: 302  PRVSRSSALASKATGFPIAKIAAKLAVGFTLDELMNDITGGRTPASFEPAIDYVVTKVPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            F FEKF GS   LTTQMKSVGE MA+GRTFQES QKALR LE    G             
Sbjct: 362  FNFEKFAGSNDRLTTQMKSVGEVMAIGRTFQESLQKALRGLEVNRHGLDPITDMSKPEAM 421

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
             +++  L+ P  DR+  I  AM+ G+ +DEI  L+ ID WFL Q +ELI +E  +    +
Sbjct: 422  ARIRLELKEPGCDRIWYIADAMRAGLTLDEIFRLTNIDPWFLVQIEELIKLEGQVAEAGL 481

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
            + + ++   ++KR+GF+D ++A      E EVR+ R    + P YKRVDTCAAEF  +T 
Sbjct: 482  AGLNEELLRKLKRKGFADARLAVVLGVNESEVRKLRDRFDIHPVYKRVDTCAAEFATDTA 541

Query: 627  YMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSN 686
            YMYS+Y+ ECE+ P+ + K+++LGGGPNRIGQGIEFDYCC H + +L+  GYETIM+N N
Sbjct: 542  YMYSTYEEECEANPSNRDKIMVLGGGPNRIGQGIEFDYCCVHAALALREDGYETIMVNCN 601

Query: 687  PETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHR 746
            PETVSTDYDTSDRLYFEP+T+EDVL ++ +E+P+G+IVQ+GGQTPLKL+          R
Sbjct: 602  PETVSTDYDTSDRLYFEPVTLEDVLEIVRIEKPKGVIVQYGGQTPLKLA----------R 651

Query: 747  LPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEIG 806
               A+G   V I GTSPD+ID AEDRERF   I+ L ++QP+     +   A+  A+ IG
Sbjct: 652  ALEAAG---VPIIGTSPDAIDRAEDRERFQQAIQRLEMKQPENDTVTTVEGAVIAAERIG 708

Query: 807  YPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALAD 866
            YP+VVRPSYVLGGRAMEIVY  + L+ Y   AV V    PVL+D +L DAIE+D+DA+ D
Sbjct: 709  YPLVVRPSYVLGGRAMEIVYDQQDLLRYFNEAVSVSNASPVLLDHFLDDAIEVDIDAVCD 768

Query: 867  SCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNC 926
                VVIG IMEHIEQAGVHSGDS C +P  T+S    D +     KLA  L V GLMN 
Sbjct: 769  G-ETVVIGAIMEHIEQAGVHSGDSGCSLPPYTLSQEIQDRMRVQVGKLAMELGVVGLMNV 827

Query: 927  QYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPKH 986
            Q+A+  + ++Y++E NPRA+RTVPFVSKA G PLAK AA VM+G+SL    FT+EVIP  
Sbjct: 828  QFAVKNN-EIYMIEVNPRAARTVPFVSKATGVPLAKIAARVMAGQSLKAQNFTQEVIPPF 886

Query: 987  VSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVFL 1046
             SVKE VLPF KF G D LLGPEMRSTGEVMG+  +F  A+AKAQ+ A  ++P SG   L
Sbjct: 887  YSVKEVVLPFNKFPGVDPLLGPEMRSTGEVMGVGDTFAEAYAKAQLGATSEVPKSGRALL 946

Query: 1047 SLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVAN 1106
            S+ +  K  +  +A   +++G++I +T GTA  L   GI    V K+HEGRPH  D + N
Sbjct: 947  SVRNSDKKRVADLAAKLIELGYQIDATHGTAVILGEAGINPRLVNKVHEGRPHILDRIKN 1006

Query: 1107 GQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTVT 1163
            G+   +V T+ G    + D  +LRR  L YKV   TT++ A A   A  +     VT
Sbjct: 1007 GEYTYIVNTTEGRQAIE-DSRQLRRGALRYKVNYTTTMNAAFATCMAHAADDRTNVT 1062


>gi|336248680|ref|YP_004592390.1| carbamoyl phosphate synthase large subunit [Enterobacter aerogenes
            KCTC 2190]
 gi|444353186|ref|YP_007389330.1| Carbamoyl-phosphate synthase large chain (EC 6.3.5.5) [Enterobacter
            aerogenes EA1509E]
 gi|334734736|gb|AEG97111.1| carbamoyl phosphate synthase large subunit [Enterobacter aerogenes
            KCTC 2190]
 gi|443904016|emb|CCG31790.1| Carbamoyl-phosphate synthase large chain (EC 6.3.5.5) [Enterobacter
            aerogenes EA1509E]
          Length = 1074

 Score = 1224 bits (3167), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 616/1071 (57%), Positives = 779/1071 (72%), Gaps = 19/1071 (1%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILILGAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  E+V +++EKERPDA+LPTMGGQTALN A+ L   G L ++GV +IGA  DA
Sbjct: 63   ATYIEPIHWEVVRKIIEKERPDAVLPTMGGQTALNCALELERQGVLAEFGVTMIGATADA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  F  AMK IG+ T  SGI +T++E +++A E+G FP IIRP+FT+GGTGGGI
Sbjct: 123  IDKAEDRRRFDVAMKKIGLDTARSGIAHTMEEALAVAAEVG-FPCIIRPSFTMGGTGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEFE IC+ GL  S T+++L+++SL+GWKEYE+EV+RD  DN +I+CSIEN D MG
Sbjct: 182  AYNREEFEEICERGLDLSPTNELLIDESLIGWKEYEMEVVRDKNDNCIIVCSIENFDAMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            +HTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGVE GGSNVQF+VNP DG ++VIEMN
Sbjct: 242  IHTGDSITVAPAQTLTDKEYQIMRNASMAVLREIGVETGGSNVQFSVNPKDGRLIVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT  +TPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGYTLDELMNDITGGRTPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            F FEKF G+   LTTQMKSVGE MA+GRT QES QKALR LE G +G+      +     
Sbjct: 362  FNFEKFAGANDRLTTQMKSVGEVMAIGRTQQESLQKALRGLEVGATGFDPKVSLDDPEAL 421

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
             +++  L+    +R+  I  A + G+ VD +  L+ ID+WFL Q +EL+ +E+ +    +
Sbjct: 422  TKIRRELKDAGAERIWYIADAFRAGLSVDGVFNLTNIDRWFLVQIEELVRLEEKVAAVGI 481

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
            + +  D    +KR+GF+D ++A      E E+R+ R    + P YKRVDTCAAEF  +T 
Sbjct: 482  NGLDADFLRHLKRKGFADARLAKLAGVREAEIRKLRDHYNLHPVYKRVDTCAAEFATDTA 541

Query: 627  YMYSSYDFECESAPT-QKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNS 685
            YMYS+Y+ ECES P+  + K+++LGGGPNRIGQGIEFDYCC H S +L+  GYETIM+N 
Sbjct: 542  YMYSTYEDECESNPSVDRDKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVNC 601

Query: 686  NPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEH 745
            NPETVSTDYDTSDRLYFEP+T+EDVL ++ +E+P+G+IVQ+GGQTPLKL+          
Sbjct: 602  NPETVSTDYDTSDRLYFEPVTLEDVLEIVRIEKPKGVIVQYGGQTPLKLA---------- 651

Query: 746  RLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEI 805
            R   A+G   V + GTSPD+ID AEDRERF   +  L ++QP      +   A+  AKEI
Sbjct: 652  RELEAAG---VPVIGTSPDAIDRAEDRERFQHAVDRLKLKQPANATVTAIEQAVEKAKEI 708

Query: 806  GYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALA 865
            GYP+VVRPSYVLGGRAMEIVY +  L  Y + AV V  + PVL+D++L DA+E+DVDA+ 
Sbjct: 709  GYPLVVRPSYVLGGRAMEIVYDEADLRRYFQTAVSVSNDAPVLLDRFLDDAVEVDVDAIC 768

Query: 866  DSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMN 925
            D    V+IGGIMEHIEQAGVHSGDSAC +P  T+S    D +     KLA  L V GLMN
Sbjct: 769  DG-EMVLIGGIMEHIEQAGVHSGDSACSLPAYTLSKEIQDVMREQVQKLAFELQVRGLMN 827

Query: 926  CQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPK 985
             Q+A+  + +VYL+E NPRA+RTVPFVSKA G PLAK AA VM+GK+L   G TKE+IP 
Sbjct: 828  VQFAVKNN-EVYLIEVNPRAARTVPFVSKATGVPLAKVAARVMAGKTLAQQGVTKEIIPP 886

Query: 986  HVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVF 1045
            + SVKE VLPF KF G D LLGPEMRSTGEVMG+  +F  AFAKAQ+ +   +   G   
Sbjct: 887  YYSVKEVVLPFNKFPGVDPLLGPEMRSTGEVMGVGRTFAEAFAKAQLGSNSTMKKQGRAL 946

Query: 1046 LSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVA 1105
            LS+ +  K  +  +A   L  GF++ +T GTA  L   GI    V K+HEGRPH  D + 
Sbjct: 947  LSVREGDKERVVDLAAKLLKQGFELDATHGTAIVLGEAGINPRLVNKVHEGRPHIQDRIK 1006

Query: 1106 NGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRS 1156
            NG+   ++ T++G    + D   +RR  L YKV   TT++G  A A A+ +
Sbjct: 1007 NGEYTYIINTTAGRQAIE-DSKLIRRSALQYKVHYDTTLNGGFATAMALNA 1056


>gi|416274793|ref|ZP_11643803.1| Carbamoyl-phosphate synthase large chain [Shigella dysenteriae CDC
            74-1112]
 gi|320173371|gb|EFW48573.1| Carbamoyl-phosphate synthase large chain [Shigella dysenteriae CDC
            74-1112]
          Length = 1073

 Score = 1224 bits (3167), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 616/1071 (57%), Positives = 782/1071 (73%), Gaps = 19/1071 (1%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILILGAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  E+V +++EKERPDA+LPTMGGQTALN A+ L   G LE++GV +IGA  DA
Sbjct: 63   ATYIEPIHWEVVRKIIEKERPDAVLPTMGGQTALNCALELERQGVLEEFGVTMIGATADA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  F  AMK IG++T  SGI +T++E +++A ++G FP IIRP+FT+GG+GGGI
Sbjct: 123  IDKAEDRRRFDVAMKKIGLETARSGIAHTMEEALAVAADVG-FPCIIRPSFTMGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEFE IC  GL  S T ++L+++SL+GWKEYE+EV+RD  DN +I+CSIEN D MG
Sbjct: 182  AYNREEFEEICARGLDLSPTKELLIDESLIGWKEYEMEVVRDKNDNCIIVCSIENFDAMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            +HTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGVE GGSNVQFAVNP +G ++VIEMN
Sbjct: 242  IHTGDSITVAPAQTLTDKEYQIMRNASMAVLREIGVETGGSNVQFAVNPKNGRLIVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT  +TPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGYTLDELMNDITGGRTPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            F FEKF G+   LTTQMKSVGE MA+GRT QES QKALR LE G +G+      +     
Sbjct: 362  FNFEKFAGANDRLTTQMKSVGEVMAIGRTQQESLQKALRGLEVGATGFDPKVSLDDPEAL 421

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
             +++  L+    +R+  I  A + G+ VD +  L+ ID+WFL Q +EL+ +E+ +    +
Sbjct: 422  TKIRRELKDAGAERIWYIADAFRAGLSVDGVFNLTNIDRWFLVQIEELVRLEKKVAEVGI 481

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
            + +  +   ++KR+GF+D ++A      E E+R+ R    + P YKRVDTCAAEF  +T 
Sbjct: 482  TGLNAEFLRQLKRKGFADARLAKLAGVREAEIRKLRDQYDLHPVYKRVDTCAAEFATDTA 541

Query: 627  YMYSSYDFECESAP-TQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNS 685
            YMYS+Y+ ECE+ P T ++K+++LGGGPNRIGQGIEFDYCC H S +L+  GYETIM+N 
Sbjct: 542  YMYSTYEEECEANPSTDREKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVNC 601

Query: 686  NPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEH 745
            NPETVSTDYDTSDRLYFEP+T+EDVL ++ +E+P+G+IVQ+GGQTPLKL+          
Sbjct: 602  NPETVSTDYDTSDRLYFEPVTLEDVLEIVRIEKPKGVIVQYGGQTPLKLA---------- 651

Query: 746  RLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEI 805
            R   A+G   V + GTSPD+ID AEDRERF   ++ L ++QP      +   A+  AKEI
Sbjct: 652  RALEAAG---VPVIGTSPDAIDRAEDRERFQHAVERLKLKQPANATVTAIEMAVEKAKEI 708

Query: 806  GYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALA 865
            GYP+VVRPSYVLGGRAMEIVY +  L  Y + AV V  + PVL+D +L DA+E+DVDA+ 
Sbjct: 709  GYPLVVRPSYVLGGRAMEIVYDEADLRRYFQTAVSVSNDAPVLLDHFLDDAVEVDVDAIC 768

Query: 866  DSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMN 925
            D    V+IGGIMEHIEQAGVHSGDSAC +P  T+S    D +     KLA  L V GLMN
Sbjct: 769  DG-EMVLIGGIMEHIEQAGVHSGDSACSLPAYTLSQEIQDVMRQQVQKLAFELQVRGLMN 827

Query: 926  CQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPK 985
             Q+A+  + +VYL+E NPRA+RTVPFVSKA G PLAK AA VM+GKSL + G TKE+IP 
Sbjct: 828  VQFAVKNN-EVYLIEVNPRAARTVPFVSKATGVPLAKVAARVMAGKSLAEQGVTKEIIPP 886

Query: 986  HVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVF 1045
            + SVKE VLPF KF G D LLGPEMRSTGEVMG+  +F  AFAKAQ+ +   +   G   
Sbjct: 887  YYSVKEVVLPFNKFPGVDPLLGPEMRSTGEVMGVGRTFAEAFAKAQLGSNSTMKKHGRAL 946

Query: 1046 LSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVA 1105
            LS+ +  K  +  +A   L  GF++ +T GTA  L   GI    V K+HEGRPH  D + 
Sbjct: 947  LSVREGDKERVVDLAAKLLKQGFELDATHGTAIVLGEAGINPRLVNKVHEGRPHIQDRIK 1006

Query: 1106 NGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRS 1156
            NG+   ++ T+SG    + D   +RR  L YKV   TT++G  A A A+ +
Sbjct: 1007 NGEYTYIINTTSGRRAIE-DSRVIRRSALQYKVHYDTTLNGGFATAMALNA 1056


>gi|386742796|ref|YP_006215975.1| carbamoyl phosphate synthase large subunit [Providencia stuartii MRSN
            2154]
 gi|384479489|gb|AFH93284.1| carbamoyl phosphate synthase large subunit [Providencia stuartii MRSN
            2154]
          Length = 1073

 Score = 1224 bits (3167), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 617/1064 (57%), Positives = 777/1064 (73%), Gaps = 19/1064 (1%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILILGAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  E+V +++EKERPDA+LPTMGGQTALN A+ L   G L ++GV +IGA  DA
Sbjct: 63   ATYIEPIHWEVVRKIIEKERPDAVLPTMGGQTALNCALELERKGVLAEFGVTMIGATADA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  F +AMK IG+ T  SGI + ++E  ++A ++G FP IIRP+FT+GGTGGGI
Sbjct: 123  IDKAEDRQRFDKAMKKIGLDTARSGIAHNMEEAYAVAEDVG-FPCIIRPSFTMGGTGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEFE IC  GL  S T+++L+++SL+GWKEYE+EV+RD  DN +I+CSIEN D MG
Sbjct: 182  AYNREEFEEICTRGLDLSPTNELLIDESLIGWKEYEMEVVRDKNDNCIIVCSIENFDAMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            +HTGDSITVAPAQTLTDKEYQ +RD S+A++REIGVE GGSNVQFAVNP +G ++VIEMN
Sbjct: 242  IHTGDSITVAPAQTLTDKEYQIMRDASMAVLREIGVETGGSNVQFAVNPKNGRLIVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT  +TPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKIAAKLAVGYTLDELMNDITGGRTPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            F FEKF G+   LTTQMKSVGE MA+GRTFQES QKALR LE G +G+     ++     
Sbjct: 362  FNFEKFAGTNDRLTTQMKSVGEVMAIGRTFQESMQKALRGLEVGATGFDPKVSQDDPEAL 421

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
             +++  L+    +R+  I  A + G+ VD I  L+ ID+WFL Q +EL+ +E+ +    +
Sbjct: 422  TRIRRELKDAGAERIWYIADAFRAGLSVDGIFNLTNIDRWFLVQIEELVRLEEQVTELGI 481

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
            + +TK     +KR+GF+D ++A     +E E+R+ R   G+ P YKRVDTCAAEF  +T 
Sbjct: 482  NGLTKTFLSVLKRKGFADARLAKLVGVSEAELRKLRQGYGLHPVYKRVDTCAAEFVTDTA 541

Query: 627  YMYSSYDFECESAPT-QKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNS 685
            YMYS+Y+ ECES P   K KV++LGGGPNRIGQGIEFDYCC H S +L+  GYETIM+N 
Sbjct: 542  YMYSTYEDECESNPNFDKPKVMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVNC 601

Query: 686  NPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEH 745
            NPETVSTDYDTSDRLYFEP+T+EDVL ++ +E+P+G+IVQ+GGQTPLKL+          
Sbjct: 602  NPETVSTDYDTSDRLYFEPVTLEDVLEIVRIEQPKGVIVQYGGQTPLKLA---------- 651

Query: 746  RLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEI 805
            R   A+G   V + GTSPD+ID AEDRERF   +  L+++QP+     +   A+  A  I
Sbjct: 652  RALEAAG---VPVIGTSPDAIDRAEDRERFQQAVNRLNLKQPQNATVVTIEQAVEKASGI 708

Query: 806  GYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALA 865
            GYP+VVRPSYVLGGRAMEIVY +  L  Y + AV V  + PVL+D++L DA+E+DVDA+ 
Sbjct: 709  GYPLVVRPSYVLGGRAMEIVYDESDLRRYFQTAVSVSNDAPVLLDRFLDDAVEVDVDAIC 768

Query: 866  DSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMN 925
            D    V+IGGIMEHIEQAGVHSGDSAC +P  T+S    D +      LA  L V GLMN
Sbjct: 769  DG-EMVLIGGIMEHIEQAGVHSGDSACSLPAYTLSQEIQDVMREQVRNLAFELRVRGLMN 827

Query: 926  CQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPK 985
             Q+A+  + +VYL+E NPRA+RTVPFVSKA G PLAK AA VM G+SL + G TKE+IP 
Sbjct: 828  VQFAVKDN-EVYLIEVNPRAARTVPFVSKATGLPLAKIAARVMVGQSLTEQGMTKEIIPP 886

Query: 986  HVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVF 1045
            + SVKE VLPF KFQG D +LGPEMRSTGEVMG+  +F  AFAKA + +   +  SG   
Sbjct: 887  YYSVKEVVLPFNKFQGVDPILGPEMRSTGEVMGVGRTFAEAFAKAMLGSNSTMKKSGRAL 946

Query: 1046 LSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVA 1105
            LS+ +  K  +  +A   L  GF++ +T GTA  L   GI    V K+HEGRPH  D + 
Sbjct: 947  LSVREGDKTRVVDLAAKLLKHGFELDATHGTAIVLGEAGINPRLVNKVHEGRPHIQDRIK 1006

Query: 1106 NGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALA 1149
            NG+   +V T++G    + D   +RR  L YKV   TT++G  A
Sbjct: 1007 NGEYDYIVNTTAGRQAIE-DSKLIRRSALQYKVHYDTTLNGGFA 1049


>gi|15799715|ref|NP_285727.1| carbamoyl phosphate synthase large subunit [Escherichia coli O157:H7
            str. EDL933]
 gi|15829290|ref|NP_308063.1| carbamoyl phosphate synthase large subunit [Escherichia coli O157:H7
            str. Sakai]
 gi|24111479|ref|NP_705989.1| carbamoyl phosphate synthase large subunit [Shigella flexneri 2a str.
            301]
 gi|30061601|ref|NP_835772.1| carbamoyl phosphate synthase large subunit [Shigella flexneri 2a str.
            2457T]
 gi|110804100|ref|YP_687620.1| carbamoyl phosphate synthase large subunit [Shigella flexneri 5 str.
            8401]
 gi|168751711|ref|ZP_02776733.1| carbamoyl-phosphate synthase, large subunit [Escherichia coli O157:H7
            str. EC4113]
 gi|168756859|ref|ZP_02781866.1| carbamoyl-phosphate synthase, large subunit [Escherichia coli O157:H7
            str. EC4401]
 gi|168762795|ref|ZP_02787802.1| carbamoyl-phosphate synthase, large subunit [Escherichia coli O157:H7
            str. EC4501]
 gi|168766723|ref|ZP_02791730.1| carbamoyl-phosphate synthase, large subunit [Escherichia coli O157:H7
            str. EC4486]
 gi|168776951|ref|ZP_02801958.1| carbamoyl-phosphate synthase, large subunit [Escherichia coli O157:H7
            str. EC4196]
 gi|168781732|ref|ZP_02806739.1| carbamoyl-phosphate synthase, large subunit [Escherichia coli O157:H7
            str. EC4076]
 gi|168785086|ref|ZP_02810093.1| carbamoyl-phosphate synthase, large subunit [Escherichia coli O157:H7
            str. EC869]
 gi|168801916|ref|ZP_02826923.1| carbamoyl-phosphate synthase, large subunit [Escherichia coli O157:H7
            str. EC508]
 gi|195937706|ref|ZP_03083088.1| carbamoyl phosphate synthase large subunit [Escherichia coli O157:H7
            str. EC4024]
 gi|208806580|ref|ZP_03248917.1| carbamoyl-phosphate synthase, large subunit [Escherichia coli O157:H7
            str. EC4206]
 gi|208812930|ref|ZP_03254259.1| carbamoyl-phosphate synthase, large subunit [Escherichia coli O157:H7
            str. EC4045]
 gi|208818860|ref|ZP_03259180.1| carbamoyl-phosphate synthase, large subunit [Escherichia coli O157:H7
            str. EC4042]
 gi|209396701|ref|YP_002268640.1| carbamoyl phosphate synthase large subunit [Escherichia coli O157:H7
            str. EC4115]
 gi|217324642|ref|ZP_03440726.1| carbamoyl-phosphate synthase, large subunit [Escherichia coli O157:H7
            str. TW14588]
 gi|254791169|ref|YP_003076006.1| carbamoyl phosphate synthase large subunit [Escherichia coli O157:H7
            str. TW14359]
 gi|261226791|ref|ZP_05941072.1| carbamoyl-phosphate synthase large subunit [Escherichia coli O157:H7
            str. FRIK2000]
 gi|261255194|ref|ZP_05947727.1| carbamoyl-phosphate synthase large subunit [Escherichia coli O157:H7
            str. FRIK966]
 gi|291280856|ref|YP_003497674.1| carbamoyl-phosphate synthase large chain [Escherichia coli O55:H7
            str. CB9615]
 gi|293417908|ref|ZP_06660530.1| carbamoyl-phosphate synthase [Escherichia coli B185]
 gi|384541610|ref|YP_005725671.1| carbamoyl-phosphate synthase large chain [Shigella flexneri 2002017]
 gi|386279084|ref|ZP_10056772.1| carbamoyl-phosphate synthase large chain [Escherichia sp. 4_1_40B]
 gi|387504966|ref|YP_006157222.1| carbamoyl phosphate synthase large subunit [Escherichia coli O55:H7
            str. RM12579]
 gi|387880592|ref|YP_006310894.1| carbamoyl phosphate synthase large subunit [Escherichia coli
            Xuzhou21]
 gi|415859926|ref|ZP_11534039.1| carbamoyl-phosphate synthase large chain [Shigella flexneri 2a str.
            2457T]
 gi|416309214|ref|ZP_11655667.1| Carbamoyl-phosphate synthase large chain [Escherichia coli O157:H7
            str. 1044]
 gi|416319091|ref|ZP_11661643.1| Carbamoyl-phosphate synthase large chain [Escherichia coli O157:H7
            str. EC1212]
 gi|416325978|ref|ZP_11666302.1| Carbamoyl-phosphate synthase large chain [Escherichia coli O157:H7
            str. 1125]
 gi|416773249|ref|ZP_11873527.1| carbamoyl phosphate synthase large subunit [Escherichia coli O157:H7
            str. G5101]
 gi|416807722|ref|ZP_11888061.1| carbamoyl phosphate synthase large subunit [Escherichia coli O55:H7
            str. 3256-97]
 gi|416818870|ref|ZP_11892940.1| carbamoyl phosphate synthase large subunit [Escherichia coli O55:H7
            str. USDA 5905]
 gi|416828206|ref|ZP_11897805.1| carbamoyl phosphate synthase large subunit [Escherichia coli O157:H7
            str. LSU-61]
 gi|417699944|ref|ZP_12349092.1| carbamoyl-phosphate synthase large chain [Shigella flexneri K-218]
 gi|417705523|ref|ZP_12354598.1| carbamoyl-phosphate synthase large chain [Shigella flexneri VA-6]
 gi|417721029|ref|ZP_12369884.1| carbamoyl-phosphate synthase large chain [Shigella flexneri K-304]
 gi|417726373|ref|ZP_12375123.1| carbamoyl-phosphate synthase large chain [Shigella flexneri K-671]
 gi|417731544|ref|ZP_12380219.1| carbamoyl-phosphate synthase large chain [Shigella flexneri 2747-71]
 gi|417741515|ref|ZP_12390072.1| carB [Shigella flexneri 2930-71]
 gi|419048232|ref|ZP_13595157.1| carB [Escherichia coli DEC3A]
 gi|419054314|ref|ZP_13601177.1| carB [Escherichia coli DEC3B]
 gi|419054675|ref|ZP_13601536.1| carB [Escherichia coli DEC3C]
 gi|419060237|ref|ZP_13607025.1| carB [Escherichia coli DEC3D]
 gi|419066064|ref|ZP_13612755.1| carB [Escherichia coli DEC3E]
 gi|419083783|ref|ZP_13629220.1| carB [Escherichia coli DEC4A]
 gi|419089792|ref|ZP_13635136.1| carB [Escherichia coli DEC4B]
 gi|419095429|ref|ZP_13640698.1| carB [Escherichia coli DEC4C]
 gi|419101548|ref|ZP_13646729.1| carB [Escherichia coli DEC4D]
 gi|419107074|ref|ZP_13652187.1| carB [Escherichia coli DEC4E]
 gi|419112517|ref|ZP_13657562.1| carB [Escherichia coli DEC4F]
 gi|419112853|ref|ZP_13657889.1| carB [Escherichia coli DEC5A]
 gi|419118358|ref|ZP_13663346.1| carB [Escherichia coli DEC5B]
 gi|419124018|ref|ZP_13668928.1| carB [Escherichia coli DEC5C]
 gi|419129591|ref|ZP_13674450.1| carB [Escherichia coli DEC5D]
 gi|419139990|ref|ZP_13684774.1| carbamoyl-phosphate synthase large chain [Escherichia coli DEC5E]
 gi|420267239|ref|ZP_14769650.1| carbamoyl-phosphate synthase large chain [Escherichia coli PA22]
 gi|420273002|ref|ZP_14775337.1| carbamoyl-phosphate synthase large chain [Escherichia coli PA40]
 gi|420284539|ref|ZP_14786759.1| carbamoyl-phosphate synthase large chain [Escherichia coli TW10246]
 gi|420290051|ref|ZP_14792220.1| carbamoyl-phosphate synthase large chain [Escherichia coli TW11039]
 gi|420295773|ref|ZP_14797871.1| carbamoyl-phosphate synthase large chain [Escherichia coli TW09109]
 gi|420301779|ref|ZP_14803814.1| carbamoyl-phosphate synthase large chain [Escherichia coli TW10119]
 gi|420307366|ref|ZP_14809342.1| carbamoyl-phosphate synthase large chain [Escherichia coli EC1738]
 gi|420313016|ref|ZP_14814931.1| carbamoyl-phosphate synthase large chain [Escherichia coli EC1734]
 gi|420318505|ref|ZP_14820365.1| carbamoyl-phosphate synthase large chain [Shigella flexneri 2850-71]
 gi|420328883|ref|ZP_14830601.1| carbamoyl-phosphate synthase large chain [Shigella flexneri K-1770]
 gi|420339499|ref|ZP_14841037.1| carbamoyl-phosphate synthase large chain [Shigella flexneri K-404]
 gi|421816247|ref|ZP_16251820.1| carbamoyl-phosphate synthase large chain [Escherichia coli 10.0821]
 gi|421821640|ref|ZP_16257085.1| carbamoyl-phosphate synthase large chain [Escherichia coli FRIK920]
 gi|421828393|ref|ZP_16263725.1| carbamoyl-phosphate synthase large chain [Escherichia coli PA7]
 gi|422834325|ref|ZP_16882387.1| carbamoyl-phosphate synthase large subunit [Escherichia coli E101]
 gi|423652394|ref|ZP_17627798.1| carbamoyl-phosphate synthase large chain [Escherichia coli PA31]
 gi|424074792|ref|ZP_17812184.1| carbamoyl-phosphate synthase large chain [Escherichia coli FDA505]
 gi|424081040|ref|ZP_17817947.1| carbamoyl-phosphate synthase large chain [Escherichia coli FDA517]
 gi|424087717|ref|ZP_17824019.1| carbamoyl-phosphate synthase large chain [Escherichia coli FRIK1996]
 gi|424093925|ref|ZP_17829739.1| carbamoyl-phosphate synthase large chain [Escherichia coli FRIK1985]
 gi|424100339|ref|ZP_17835548.1| carbamoyl-phosphate synthase large chain [Escherichia coli FRIK1990]
 gi|424107163|ref|ZP_17841784.1| carbamoyl-phosphate synthase large chain [Escherichia coli 93-001]
 gi|424113138|ref|ZP_17847337.1| carbamoyl-phosphate synthase large chain [Escherichia coli PA3]
 gi|424119267|ref|ZP_17853026.1| carbamoyl-phosphate synthase large chain [Escherichia coli PA5]
 gi|424125484|ref|ZP_17858726.1| carbamoyl-phosphate synthase large chain [Escherichia coli PA9]
 gi|424131490|ref|ZP_17864346.1| carbamoyl-phosphate synthase large chain [Escherichia coli PA10]
 gi|424138103|ref|ZP_17870445.1| carbamoyl-phosphate synthase large chain [Escherichia coli PA14]
 gi|424144557|ref|ZP_17876365.1| carbamoyl-phosphate synthase large chain [Escherichia coli PA15]
 gi|424150703|ref|ZP_17882009.1| carbamoyl-phosphate synthase large chain [Escherichia coli PA24]
 gi|424260055|ref|ZP_17892991.1| carbamoyl-phosphate synthase large chain [Escherichia coli PA25]
 gi|424260741|ref|ZP_17893327.1| carbamoyl-phosphate synthase large chain [Escherichia coli PA28]
 gi|424416977|ref|ZP_17899097.1| carbamoyl-phosphate synthase large chain [Escherichia coli PA32]
 gi|424453102|ref|ZP_17904689.1| carbamoyl-phosphate synthase large chain [Escherichia coli PA33]
 gi|424459376|ref|ZP_17910388.1| carbamoyl-phosphate synthase large chain [Escherichia coli PA39]
 gi|424465841|ref|ZP_17916078.1| carbamoyl-phosphate synthase large chain [Escherichia coli PA41]
 gi|424472443|ref|ZP_17922155.1| carbamoyl-phosphate synthase large chain [Escherichia coli PA42]
 gi|424478412|ref|ZP_17927701.1| carbamoyl-phosphate synthase large chain [Escherichia coli TW07945]
 gi|424484437|ref|ZP_17933356.1| carbamoyl-phosphate synthase large chain [Escherichia coli TW09098]
 gi|424490525|ref|ZP_17939006.1| carbamoyl-phosphate synthase large chain [Escherichia coli TW09195]
 gi|424497651|ref|ZP_17944974.1| carbamoyl-phosphate synthase large chain [Escherichia coli EC4203]
 gi|424503897|ref|ZP_17950722.1| carbamoyl-phosphate synthase large chain [Escherichia coli EC4196]
 gi|424510135|ref|ZP_17956442.1| carbamoyl-phosphate synthase large chain [Escherichia coli TW14313]
 gi|424517719|ref|ZP_17962193.1| carbamoyl-phosphate synthase large chain [Escherichia coli TW14301]
 gi|424523549|ref|ZP_17967616.1| carbamoyl-phosphate synthase large chain [Escherichia coli EC4421]
 gi|424529754|ref|ZP_17973423.1| carbamoyl-phosphate synthase large chain [Escherichia coli EC4422]
 gi|424535725|ref|ZP_17979033.1| carbamoyl-phosphate synthase large chain [Escherichia coli EC4013]
 gi|424541610|ref|ZP_17984496.1| carbamoyl-phosphate synthase large chain [Escherichia coli EC4402]
 gi|424547938|ref|ZP_17990200.1| carbamoyl-phosphate synthase large chain [Escherichia coli EC4439]
 gi|424554228|ref|ZP_17995996.1| carbamoyl-phosphate synthase large chain [Escherichia coli EC4436]
 gi|424560575|ref|ZP_18001901.1| carbamoyl-phosphate synthase large chain [Escherichia coli EC4437]
 gi|424566583|ref|ZP_18007549.1| carbamoyl-phosphate synthase large chain [Escherichia coli EC4448]
 gi|424572782|ref|ZP_18013253.1| carbamoyl-phosphate synthase large chain [Escherichia coli EC1845]
 gi|424584611|ref|ZP_18024231.1| carbamoyl-phosphate synthase large chain [Escherichia coli EC1863]
 gi|424836568|ref|ZP_18261205.1| carbamoyl phosphate synthase large subunit [Shigella flexneri 5a str.
            M90T]
 gi|425095423|ref|ZP_18498483.1| carbamoyl-phosphate synthase large chain [Escherichia coli 3.4870]
 gi|425101508|ref|ZP_18504196.1| carbamoyl-phosphate synthase large chain [Escherichia coli 5.2239]
 gi|425107365|ref|ZP_18509650.1| carbamoyl-phosphate synthase large chain [Escherichia coli 6.0172]
 gi|425123177|ref|ZP_18524792.1| carbamoyl-phosphate synthase large chain [Escherichia coli 8.0586]
 gi|425129203|ref|ZP_18530346.1| carbamoyl-phosphate synthase large chain [Escherichia coli 8.2524]
 gi|425135545|ref|ZP_18536314.1| carbamoyl-phosphate synthase large chain [Escherichia coli 10.0833]
 gi|425147334|ref|ZP_18547298.1| carbamoyl-phosphate synthase large chain [Escherichia coli 10.0869]
 gi|425147769|ref|ZP_18547706.1| carbamoyl-phosphate synthase large chain [Escherichia coli 88.0221]
 gi|425153382|ref|ZP_18552969.1| carbamoyl-phosphate synthase large chain [Escherichia coli PA34]
 gi|425159844|ref|ZP_18559054.1| carbamoyl-phosphate synthase large chain [Escherichia coli FDA506]
 gi|425165359|ref|ZP_18564202.1| carbamoyl-phosphate synthase large chain [Escherichia coli FDA507]
 gi|425171646|ref|ZP_18570083.1| carbamoyl-phosphate synthase large chain [Escherichia coli FDA504]
 gi|425177447|ref|ZP_18575534.1| carbamoyl-phosphate synthase large chain [Escherichia coli FRIK1999]
 gi|425183671|ref|ZP_18581331.1| carbamoyl-phosphate synthase large chain [Escherichia coli FRIK1997]
 gi|425190405|ref|ZP_18587564.1| carbamoyl-phosphate synthase large chain [Escherichia coli NE1487]
 gi|425196702|ref|ZP_18593394.1| carbamoyl-phosphate synthase large chain [Escherichia coli NE037]
 gi|425203400|ref|ZP_18599562.1| carbamoyl-phosphate synthase large chain [Escherichia coli FRIK2001]
 gi|425209173|ref|ZP_18604945.1| carbamoyl-phosphate synthase large chain [Escherichia coli PA4]
 gi|425221271|ref|ZP_18616211.1| carbamoyl-phosphate synthase large chain [Escherichia coli PA23]
 gi|425221777|ref|ZP_18616672.1| carbamoyl-phosphate synthase large chain [Escherichia coli PA49]
 gi|425228031|ref|ZP_18622463.1| carbamoyl-phosphate synthase large chain [Escherichia coli PA45]
 gi|425234329|ref|ZP_18628323.1| carbamoyl-phosphate synthase large chain [Escherichia coli TT12B]
 gi|425240304|ref|ZP_18633974.1| carbamoyl-phosphate synthase large chain [Escherichia coli MA6]
 gi|425246385|ref|ZP_18639624.1| carbamoyl-phosphate synthase large chain [Escherichia coli 5905]
 gi|425252170|ref|ZP_18645089.1| carbamoyl-phosphate synthase large chain [Escherichia coli CB7326]
 gi|425264490|ref|ZP_18656449.1| carbamoyl-phosphate synthase large chain [Escherichia coli EC96038]
 gi|425292001|ref|ZP_18682641.1| carbamoyl-phosphate synthase large chain [Escherichia coli PA38]
 gi|425308785|ref|ZP_18698297.1| carbamoyl-phosphate synthase large chain [Escherichia coli EC1735]
 gi|425314713|ref|ZP_18703831.1| carbamoyl-phosphate synthase large chain [Escherichia coli EC1736]
 gi|425320788|ref|ZP_18709509.1| carbamoyl-phosphate synthase large chain [Escherichia coli EC1737]
 gi|425326951|ref|ZP_18715223.1| carbamoyl-phosphate synthase large chain [Escherichia coli EC1846]
 gi|425333139|ref|ZP_18720908.1| carbamoyl-phosphate synthase large chain [Escherichia coli EC1847]
 gi|425339559|ref|ZP_18726840.1| carbamoyl-phosphate synthase large chain [Escherichia coli EC1848]
 gi|425345436|ref|ZP_18732284.1| carbamoyl-phosphate synthase large chain [Escherichia coli EC1849]
 gi|425351651|ref|ZP_18738072.1| carbamoyl-phosphate synthase large chain [Escherichia coli EC1850]
 gi|425357637|ref|ZP_18743651.1| carbamoyl-phosphate synthase large chain [Escherichia coli EC1856]
 gi|425363749|ref|ZP_18749353.1| carbamoyl-phosphate synthase large chain [Escherichia coli EC1862]
 gi|425370184|ref|ZP_18755190.1| carbamoyl-phosphate synthase large chain [Escherichia coli EC1864]
 gi|425389038|ref|ZP_18772572.1| carbamoyl-phosphate synthase large chain [Escherichia coli EC1866]
 gi|425389679|ref|ZP_18773174.1| carbamoyl-phosphate synthase large chain [Escherichia coli EC1868]
 gi|425395804|ref|ZP_18778884.1| carbamoyl-phosphate synthase large chain [Escherichia coli EC1869]
 gi|425407960|ref|ZP_18790152.1| carbamoyl-phosphate synthase large chain [Escherichia coli EC1870]
 gi|425408336|ref|ZP_18790525.1| carbamoyl-phosphate synthase large chain [Escherichia coli NE098]
 gi|425414605|ref|ZP_18796276.1| carbamoyl-phosphate synthase large chain [Escherichia coli FRIK523]
 gi|428944388|ref|ZP_19017080.1| carbamoyl-phosphate synthase large chain [Escherichia coli 88.1467]
 gi|428950561|ref|ZP_19022742.1| carbamoyl-phosphate synthase large chain [Escherichia coli 88.1042]
 gi|428956407|ref|ZP_19028155.1| carbamoyl-phosphate synthase large chain [Escherichia coli 89.0511]
 gi|428962774|ref|ZP_19033995.1| carbamoyl-phosphate synthase large chain [Escherichia coli 90.0091]
 gi|428974694|ref|ZP_19044976.1| carbamoyl-phosphate synthase large chain [Escherichia coli 90.0039]
 gi|428975479|ref|ZP_19045690.1| carbamoyl-phosphate synthase large chain [Escherichia coli 90.2281]
 gi|428981216|ref|ZP_19050987.1| carbamoyl-phosphate synthase large chain [Escherichia coli 93.0055]
 gi|428987363|ref|ZP_19056690.1| carbamoyl-phosphate synthase large chain [Escherichia coli 93.0056]
 gi|428993173|ref|ZP_19062117.1| carbamoyl-phosphate synthase large chain [Escherichia coli 94.0618]
 gi|428999265|ref|ZP_19067815.1| carbamoyl-phosphate synthase large chain [Escherichia coli 95.0183]
 gi|429005499|ref|ZP_19073471.1| carbamoyl-phosphate synthase large chain [Escherichia coli 95.1288]
 gi|429011863|ref|ZP_19079152.1| carbamoyl-phosphate synthase large chain [Escherichia coli 95.0943]
 gi|429018166|ref|ZP_19084983.1| carbamoyl-phosphate synthase large chain [Escherichia coli 96.0428]
 gi|429023745|ref|ZP_19090196.1| carbamoyl-phosphate synthase large chain [Escherichia coli 96.0427]
 gi|429030049|ref|ZP_19095958.1| carbamoyl-phosphate synthase large chain [Escherichia coli 96.0939]
 gi|429036201|ref|ZP_19101681.1| carbamoyl-phosphate synthase large chain [Escherichia coli 96.0932]
 gi|429042235|ref|ZP_19107273.1| carbamoyl-phosphate synthase large chain [Escherichia coli 96.0107]
 gi|429048005|ref|ZP_19112673.1| carbamoyl-phosphate synthase large chain [Escherichia coli 97.0003]
 gi|429053374|ref|ZP_19117896.1| carbamoyl-phosphate synthase large chain [Escherichia coli 97.1742]
 gi|429059064|ref|ZP_19123236.1| carbamoyl-phosphate synthase large chain [Escherichia coli 97.0007]
 gi|429064450|ref|ZP_19128350.1| carbamoyl-phosphate synthase large chain [Escherichia coli 99.0672]
 gi|429071069|ref|ZP_19134437.1| carbamoyl-phosphate synthase large chain [Escherichia coli 99.0678]
 gi|429076299|ref|ZP_19139529.1| carbamoyl-phosphate synthase large chain [Escherichia coli 99.0713]
 gi|429823511|ref|ZP_19355068.1| carbamoyl-phosphate synthase large chain [Escherichia coli 96.0109]
 gi|429829880|ref|ZP_19360800.1| carbamoyl-phosphate synthase large chain [Escherichia coli 97.0010]
 gi|432389927|ref|ZP_19632793.1| carbamoyl-phosphate synthase large chain [Escherichia coli KTE21]
 gi|432529335|ref|ZP_19766394.1| carbamoyl-phosphate synthase large chain [Escherichia coli KTE233]
 gi|432635353|ref|ZP_19871244.1| carbamoyl-phosphate synthase large chain [Escherichia coli KTE81]
 gi|432689822|ref|ZP_19925076.1| carbamoyl-phosphate synthase large chain [Escherichia coli KTE161]
 gi|432944600|ref|ZP_20141010.1| carbamoyl-phosphate synthase large chain [Escherichia coli KTE196]
 gi|433041530|ref|ZP_20229069.1| carbamoyl-phosphate synthase large chain [Escherichia coli KTE117]
 gi|444922224|ref|ZP_21241989.1| carbamoyl-phosphate synthase large chain [Escherichia coli
            09BKT078844]
 gi|444928545|ref|ZP_21247717.1| carbamoyl-phosphate synthase large chain [Escherichia coli 99.0814]
 gi|444933943|ref|ZP_21252909.1| carbamoyl-phosphate synthase large chain [Escherichia coli 99.0815]
 gi|444939513|ref|ZP_21258183.1| carbamoyl-phosphate synthase large chain [Escherichia coli 99.0816]
 gi|444945108|ref|ZP_21263546.1| carbamoyl-phosphate synthase large chain [Escherichia coli 99.0839]
 gi|444950637|ref|ZP_21268881.1| carbamoyl-phosphate synthase large chain [Escherichia coli 99.0848]
 gi|444956109|ref|ZP_21274134.1| carbamoyl-phosphate synthase large chain [Escherichia coli 99.1753]
 gi|444967170|ref|ZP_21284656.1| carbamoyl-phosphate synthase large chain [Escherichia coli 99.1793]
 gi|444972675|ref|ZP_21289980.1| carbamoyl-phosphate synthase large chain [Escherichia coli 99.1805]
 gi|444978188|ref|ZP_21295196.1| carbamoyl-phosphate synthase large chain [Escherichia coli ATCC
            700728]
 gi|444983509|ref|ZP_21300385.1| carbamoyl-phosphate synthase large chain [Escherichia coli PA11]
 gi|444988752|ref|ZP_21305503.1| carbamoyl-phosphate synthase large chain [Escherichia coli PA19]
 gi|444999246|ref|ZP_21315728.1| carbamoyl-phosphate synthase large chain [Escherichia coli PA13]
 gi|444999577|ref|ZP_21316052.1| carbamoyl-phosphate synthase large chain [Escherichia coli PA2]
 gi|445005039|ref|ZP_21321393.1| carbamoyl-phosphate synthase large chain [Escherichia coli PA47]
 gi|445015344|ref|ZP_21331427.1| carbamoyl-phosphate synthase large chain [Escherichia coli PA48]
 gi|445015982|ref|ZP_21332043.1| carbamoyl-phosphate synthase large chain [Escherichia coli PA8]
 gi|445021455|ref|ZP_21337389.1| carbamoyl-phosphate synthase large chain [Escherichia coli 7.1982]
 gi|445026695|ref|ZP_21342484.1| carbamoyl-phosphate synthase large chain [Escherichia coli 99.1781]
 gi|445032171|ref|ZP_21347809.1| carbamoyl-phosphate synthase large chain [Escherichia coli 99.1762]
 gi|445037865|ref|ZP_21353348.1| carbamoyl-phosphate synthase large chain [Escherichia coli PA35]
 gi|445043039|ref|ZP_21358388.1| carbamoyl-phosphate synthase large chain [Escherichia coli 3.4880]
 gi|445048690|ref|ZP_21363873.1| carbamoyl-phosphate synthase large chain [Escherichia coli 95.0083]
 gi|445054309|ref|ZP_21369271.1| carbamoyl-phosphate synthase large chain [Escherichia coli 99.0670]
 gi|452970118|ref|ZP_21968345.1| carbamoyl phosphate synthase large subunit [Escherichia coli O157:H7
            str. EC4009]
 gi|54036830|sp|P63738.2|CARB_SHIFL RecName: Full=Carbamoyl-phosphate synthase large chain; AltName:
            Full=Carbamoyl-phosphate synthetase ammonia chain
 gi|54040878|sp|P63737.2|CARB_ECO57 RecName: Full=Carbamoyl-phosphate synthase large chain; AltName:
            Full=Carbamoyl-phosphate synthetase ammonia chain
 gi|12512719|gb|AAG54335.1|AE005180_2 carbamoyl-phosphate synthase large subunit [Escherichia coli O157:H7
            str. EDL933]
 gi|13359492|dbj|BAB33459.1| carbamoyl-phosphate synthase large subunit [Escherichia coli O157:H7
            str. Sakai]
 gi|24050230|gb|AAN41696.1| carbamoyl-phosphate synthase large subunit [Shigella flexneri 2a str.
            301]
 gi|30039843|gb|AAP15577.1| carbamoyl-phosphate synthase large subunit [Shigella flexneri 2a str.
            2457T]
 gi|110613648|gb|ABF02315.1| carbamoyl-phosphate synthase large subunit [Shigella flexneri 5 str.
            8401]
 gi|187767704|gb|EDU31548.1| carbamoyl-phosphate synthase, large subunit [Escherichia coli O157:H7
            str. EC4196]
 gi|188014318|gb|EDU52440.1| carbamoyl-phosphate synthase, large subunit [Escherichia coli O157:H7
            str. EC4113]
 gi|189000773|gb|EDU69759.1| carbamoyl-phosphate synthase, large subunit [Escherichia coli O157:H7
            str. EC4076]
 gi|189356056|gb|EDU74475.1| carbamoyl-phosphate synthase, large subunit [Escherichia coli O157:H7
            str. EC4401]
 gi|189364139|gb|EDU82558.1| carbamoyl-phosphate synthase, large subunit [Escherichia coli O157:H7
            str. EC4486]
 gi|189366979|gb|EDU85395.1| carbamoyl-phosphate synthase, large subunit [Escherichia coli O157:H7
            str. EC4501]
 gi|189375070|gb|EDU93486.1| carbamoyl-phosphate synthase, large subunit [Escherichia coli O157:H7
            str. EC869]
 gi|189376018|gb|EDU94434.1| carbamoyl-phosphate synthase, large subunit [Escherichia coli O157:H7
            str. EC508]
 gi|208726381|gb|EDZ75982.1| carbamoyl-phosphate synthase, large subunit [Escherichia coli O157:H7
            str. EC4206]
 gi|208734207|gb|EDZ82894.1| carbamoyl-phosphate synthase, large subunit [Escherichia coli O157:H7
            str. EC4045]
 gi|208738983|gb|EDZ86665.1| carbamoyl-phosphate synthase, large subunit [Escherichia coli O157:H7
            str. EC4042]
 gi|209158101|gb|ACI35534.1| carbamoyl-phosphate synthase, large subunit [Escherichia coli O157:H7
            str. EC4115]
 gi|209748710|gb|ACI72662.1| carbamoyl-phosphate synthase large subunit [Escherichia coli]
 gi|209748712|gb|ACI72663.1| carbamoyl-phosphate synthase large subunit [Escherichia coli]
 gi|209748714|gb|ACI72664.1| carbamoyl-phosphate synthase large subunit [Escherichia coli]
 gi|217320863|gb|EEC29287.1| carbamoyl-phosphate synthase, large subunit [Escherichia coli O157:H7
            str. TW14588]
 gi|254590569|gb|ACT69930.1| carbamoyl-phosphate synthase large subunit [Escherichia coli O157:H7
            str. TW14359]
 gi|281599394|gb|ADA72378.1| Carbamoyl-phosphate synthase large chain [Shigella flexneri 2002017]
 gi|290760729|gb|ADD54690.1| Carbamoyl-phosphate synthase large chain [Escherichia coli O55:H7
            str. CB9615]
 gi|291430626|gb|EFF03624.1| carbamoyl-phosphate synthase [Escherichia coli B185]
 gi|313646591|gb|EFS11052.1| carbamoyl-phosphate synthase large chain [Shigella flexneri 2a str.
            2457T]
 gi|320190447|gb|EFW65097.1| Carbamoyl-phosphate synthase large chain [Escherichia coli O157:H7
            str. EC1212]
 gi|320642073|gb|EFX11424.1| carbamoyl phosphate synthase large subunit [Escherichia coli O157:H7
            str. G5101]
 gi|320658159|gb|EFX25888.1| carbamoyl phosphate synthase large subunit [Escherichia coli O55:H7
            str. 3256-97 TW 07815]
 gi|320663468|gb|EFX30752.1| carbamoyl phosphate synthase large subunit [Escherichia coli O55:H7
            str. USDA 5905]
 gi|320668780|gb|EFX35575.1| carbamoyl phosphate synthase large subunit [Escherichia coli O157:H7
            str. LSU-61]
 gi|326345250|gb|EGD68993.1| Carbamoyl-phosphate synthase large chain [Escherichia coli O157:H7
            str. 1125]
 gi|326346897|gb|EGD70631.1| Carbamoyl-phosphate synthase large chain [Escherichia coli O157:H7
            str. 1044]
 gi|332762315|gb|EGJ92582.1| carbamoyl-phosphate synthase large chain [Shigella flexneri 2747-71]
 gi|332764874|gb|EGJ95102.1| carbamoyl-phosphate synthase large chain [Shigella flexneri K-671]
 gi|332768820|gb|EGJ98999.1| carB [Shigella flexneri 2930-71]
 gi|333009202|gb|EGK28658.1| carbamoyl-phosphate synthase large chain [Shigella flexneri K-218]
 gi|333010524|gb|EGK29957.1| carbamoyl-phosphate synthase large chain [Shigella flexneri VA-6]
 gi|333022398|gb|EGK41636.1| carbamoyl-phosphate synthase large chain [Shigella flexneri K-304]
 gi|371601845|gb|EHN90564.1| carbamoyl-phosphate synthase large subunit [Escherichia coli E101]
 gi|374356960|gb|AEZ38667.1| carbamoyl phosphate synthase large subunit [Escherichia coli O55:H7
            str. RM12579]
 gi|377887253|gb|EHU51730.1| carB [Escherichia coli DEC3A]
 gi|377888704|gb|EHU53175.1| carB [Escherichia coli DEC3B]
 gi|377915302|gb|EHU79411.1| carB [Escherichia coli DEC3C]
 gi|377919586|gb|EHU83624.1| carB [Escherichia coli DEC3D]
 gi|377921768|gb|EHU85763.1| carB [Escherichia coli DEC3E]
 gi|377922217|gb|EHU86209.1| carB [Escherichia coli DEC4A]
 gi|377925716|gb|EHU89656.1| carB [Escherichia coli DEC4B]
 gi|377936104|gb|EHU99898.1| carB [Escherichia coli DEC4D]
 gi|377936276|gb|EHV00070.1| carB [Escherichia coli DEC4C]
 gi|377942555|gb|EHV06289.1| carB [Escherichia coli DEC4E]
 gi|377953143|gb|EHV16724.1| carB [Escherichia coli DEC4F]
 gi|377966706|gb|EHV30116.1| carB [Escherichia coli DEC5A]
 gi|377974589|gb|EHV37916.1| carB [Escherichia coli DEC5B]
 gi|377978788|gb|EHV42067.1| carbamoyl-phosphate synthase large chain [Escherichia coli DEC5E]
 gi|377983495|gb|EHV46739.1| carB [Escherichia coli DEC5D]
 gi|377983737|gb|EHV46979.1| carB [Escherichia coli DEC5C]
 gi|383465620|gb|EID60641.1| carbamoyl phosphate synthase large subunit [Shigella flexneri 5a str.
            M90T]
 gi|386123673|gb|EIG72262.1| carbamoyl-phosphate synthase large chain [Escherichia sp. 4_1_40B]
 gi|386794050|gb|AFJ27084.1| carbamoyl phosphate synthase large subunit [Escherichia coli
            Xuzhou21]
 gi|390651641|gb|EIN29912.1| carbamoyl-phosphate synthase large chain [Escherichia coli FRIK1996]
 gi|390654105|gb|EIN32158.1| carbamoyl-phosphate synthase large chain [Escherichia coli FDA517]
 gi|390654401|gb|EIN32447.1| carbamoyl-phosphate synthase large chain [Escherichia coli FDA505]
 gi|390670861|gb|EIN47349.1| carbamoyl-phosphate synthase large chain [Escherichia coli 93-001]
 gi|390674784|gb|EIN50949.1| carbamoyl-phosphate synthase large chain [Escherichia coli FRIK1990]
 gi|390676446|gb|EIN52546.1| carbamoyl-phosphate synthase large chain [Escherichia coli FRIK1985]
 gi|390689901|gb|EIN64803.1| carbamoyl-phosphate synthase large chain [Escherichia coli PA3]
 gi|390693696|gb|EIN68313.1| carbamoyl-phosphate synthase large chain [Escherichia coli PA9]
 gi|390694658|gb|EIN69216.1| carbamoyl-phosphate synthase large chain [Escherichia coli PA5]
 gi|390709674|gb|EIN82752.1| carbamoyl-phosphate synthase large chain [Escherichia coli PA10]
 gi|390711995|gb|EIN84953.1| carbamoyl-phosphate synthase large chain [Escherichia coli PA15]
 gi|390715055|gb|EIN87922.1| carbamoyl-phosphate synthase large chain [Escherichia coli PA14]
 gi|390716636|gb|EIN89431.1| carbamoyl-phosphate synthase large chain [Escherichia coli PA25]
 gi|390721628|gb|EIN94322.1| carbamoyl-phosphate synthase large chain [Escherichia coli PA22]
 gi|390735044|gb|EIO06473.1| carbamoyl-phosphate synthase large chain [Escherichia coli PA24]
 gi|390738239|gb|EIO09457.1| carbamoyl-phosphate synthase large chain [Escherichia coli PA28]
 gi|390753322|gb|EIO23045.1| carbamoyl-phosphate synthase large chain [Escherichia coli PA31]
 gi|390753633|gb|EIO23310.1| carbamoyl-phosphate synthase large chain [Escherichia coli PA32]
 gi|390758033|gb|EIO27501.1| carbamoyl-phosphate synthase large chain [Escherichia coli PA33]
 gi|390763291|gb|EIO32540.1| carbamoyl-phosphate synthase large chain [Escherichia coli PA40]
 gi|390777169|gb|EIO45013.1| carbamoyl-phosphate synthase large chain [Escherichia coli PA41]
 gi|390781334|gb|EIO49018.1| carbamoyl-phosphate synthase large chain [Escherichia coli PA42]
 gi|390789398|gb|EIO56859.1| carbamoyl-phosphate synthase large chain [Escherichia coli PA39]
 gi|390796327|gb|EIO63603.1| carbamoyl-phosphate synthase large chain [Escherichia coli TW10246]
 gi|390802777|gb|EIO69806.1| carbamoyl-phosphate synthase large chain [Escherichia coli TW11039]
 gi|390812276|gb|EIO78959.1| carbamoyl-phosphate synthase large chain [Escherichia coli TW07945]
 gi|390812571|gb|EIO79247.1| carbamoyl-phosphate synthase large chain [Escherichia coli TW09109]
 gi|390820372|gb|EIO86678.1| carbamoyl-phosphate synthase large chain [Escherichia coli TW10119]
 gi|390824908|gb|EIO90857.1| carbamoyl-phosphate synthase large chain [Escherichia coli TW09098]
 gi|390838033|gb|EIP02351.1| carbamoyl-phosphate synthase large chain [Escherichia coli EC4203]
 gi|390841109|gb|EIP05080.1| carbamoyl-phosphate synthase large chain [Escherichia coli EC4196]
 gi|390845459|gb|EIP09112.1| carbamoyl-phosphate synthase large chain [Escherichia coli TW09195]
 gi|390856720|gb|EIP19291.1| carbamoyl-phosphate synthase large chain [Escherichia coli TW14301]
 gi|390861396|gb|EIP23644.1| carbamoyl-phosphate synthase large chain [Escherichia coli EC4421]
 gi|390862950|gb|EIP25112.1| carbamoyl-phosphate synthase large chain [Escherichia coli TW14313]
 gi|390872453|gb|EIP33742.1| carbamoyl-phosphate synthase large chain [Escherichia coli EC4422]
 gi|390877663|gb|EIP38558.1| carbamoyl-phosphate synthase large chain [Escherichia coli EC4013]
 gi|390887579|gb|EIP47527.1| carbamoyl-phosphate synthase large chain [Escherichia coli EC4402]
 gi|390888850|gb|EIP48632.1| carbamoyl-phosphate synthase large chain [Escherichia coli EC4439]
 gi|390896298|gb|EIP55688.1| carbamoyl-phosphate synthase large chain [Escherichia coli EC4436]
 gi|390904472|gb|EIP63468.1| carbamoyl-phosphate synthase large chain [Escherichia coli EC1738]
 gi|390912610|gb|EIP71262.1| carbamoyl-phosphate synthase large chain [Escherichia coli EC4437]
 gi|390912868|gb|EIP71514.1| carbamoyl-phosphate synthase large chain [Escherichia coli EC1734]
 gi|390914154|gb|EIP72698.1| carbamoyl-phosphate synthase large chain [Escherichia coli EC1863]
 gi|390917592|gb|EIP76009.1| carbamoyl-phosphate synthase large chain [Escherichia coli EC4448]
 gi|390926600|gb|EIP84159.1| carbamoyl-phosphate synthase large chain [Escherichia coli EC1845]
 gi|391255348|gb|EIQ14496.1| carbamoyl-phosphate synthase large chain [Shigella flexneri 2850-71]
 gi|391261721|gb|EIQ20766.1| carbamoyl-phosphate synthase large chain [Shigella flexneri K-1770]
 gi|391275401|gb|EIQ34190.1| carbamoyl-phosphate synthase large chain [Shigella flexneri K-404]
 gi|408073519|gb|EKH07828.1| carbamoyl-phosphate synthase large chain [Escherichia coli PA7]
 gi|408077254|gb|EKH11462.1| carbamoyl-phosphate synthase large chain [Escherichia coli FRIK920]
 gi|408087267|gb|EKH20716.1| carbamoyl-phosphate synthase large chain [Escherichia coli PA34]
 gi|408091872|gb|EKH25071.1| carbamoyl-phosphate synthase large chain [Escherichia coli FDA506]
 gi|408097612|gb|EKH30495.1| carbamoyl-phosphate synthase large chain [Escherichia coli FDA507]
 gi|408103794|gb|EKH36123.1| carbamoyl-phosphate synthase large chain [Escherichia coli FDA504]
 gi|408111222|gb|EKH42973.1| carbamoyl-phosphate synthase large chain [Escherichia coli FRIK1999]
 gi|408117329|gb|EKH48514.1| carbamoyl-phosphate synthase large chain [Escherichia coli FRIK1997]
 gi|408123026|gb|EKH53828.1| carbamoyl-phosphate synthase large chain [Escherichia coli NE1487]
 gi|408131262|gb|EKH61304.1| carbamoyl-phosphate synthase large chain [Escherichia coli NE037]
 gi|408132945|gb|EKH62862.1| carbamoyl-phosphate synthase large chain [Escherichia coli FRIK2001]
 gi|408133949|gb|EKH63802.1| carbamoyl-phosphate synthase large chain [Escherichia coli PA23]
 gi|408142302|gb|EKH71683.1| carbamoyl-phosphate synthase large chain [Escherichia coli PA4]
 gi|408154678|gb|EKH83009.1| carbamoyl-phosphate synthase large chain [Escherichia coli PA49]
 gi|408159655|gb|EKH87707.1| carbamoyl-phosphate synthase large chain [Escherichia coli PA45]
 gi|408167917|gb|EKH95370.1| carbamoyl-phosphate synthase large chain [Escherichia coli TT12B]
 gi|408174019|gb|EKI01015.1| carbamoyl-phosphate synthase large chain [Escherichia coli MA6]
 gi|408175579|gb|EKI02477.1| carbamoyl-phosphate synthase large chain [Escherichia coli 5905]
 gi|408175731|gb|EKI02624.1| carbamoyl-phosphate synthase large chain [Escherichia coli EC96038]
 gi|408187889|gb|EKI13778.1| carbamoyl-phosphate synthase large chain [Escherichia coli CB7326]
 gi|408234704|gb|EKI57710.1| carbamoyl-phosphate synthase large chain [Escherichia coli PA38]
 gi|408240901|gb|EKI63552.1| carbamoyl-phosphate synthase large chain [Escherichia coli EC1735]
 gi|408250381|gb|EKI72241.1| carbamoyl-phosphate synthase large chain [Escherichia coli EC1736]
 gi|408254706|gb|EKI76204.1| carbamoyl-phosphate synthase large chain [Escherichia coli EC1737]
 gi|408260817|gb|EKI81866.1| carbamoyl-phosphate synthase large chain [Escherichia coli EC1846]
 gi|408269426|gb|EKI89671.1| carbamoyl-phosphate synthase large chain [Escherichia coli EC1847]
 gi|408271340|gb|EKI91467.1| carbamoyl-phosphate synthase large chain [Escherichia coli EC1848]
 gi|408280300|gb|EKI99852.1| carbamoyl-phosphate synthase large chain [Escherichia coli EC1849]
 gi|408286206|gb|EKJ05134.1| carbamoyl-phosphate synthase large chain [Escherichia coli EC1850]
 gi|408289443|gb|EKJ08201.1| carbamoyl-phosphate synthase large chain [Escherichia coli EC1856]
 gi|408301946|gb|EKJ19500.1| carbamoyl-phosphate synthase large chain [Escherichia coli EC1862]
 gi|408302152|gb|EKJ19687.1| carbamoyl-phosphate synthase large chain [Escherichia coli EC1864]
 gi|408303146|gb|EKJ20612.1| carbamoyl-phosphate synthase large chain [Escherichia coli EC1866]
 gi|408319731|gb|EKJ35850.1| carbamoyl-phosphate synthase large chain [Escherichia coli EC1868]
 gi|408320145|gb|EKJ36248.1| carbamoyl-phosphate synthase large chain [Escherichia coli EC1870]
 gi|408332386|gb|EKJ47421.1| carbamoyl-phosphate synthase large chain [Escherichia coli EC1869]
 gi|408338532|gb|EKJ53180.1| carbamoyl-phosphate synthase large chain [Escherichia coli NE098]
 gi|408351101|gb|EKJ64892.1| carbamoyl-phosphate synthase large chain [Escherichia coli FRIK523]
 gi|408560571|gb|EKK36834.1| carbamoyl-phosphate synthase large chain [Escherichia coli 5.2239]
 gi|408561038|gb|EKK37282.1| carbamoyl-phosphate synthase large chain [Escherichia coli 3.4870]
 gi|408561448|gb|EKK37651.1| carbamoyl-phosphate synthase large chain [Escherichia coli 6.0172]
 gi|408586097|gb|EKK60880.1| carbamoyl-phosphate synthase large chain [Escherichia coli 8.0586]
 gi|408587313|gb|EKK61969.1| carbamoyl-phosphate synthase large chain [Escherichia coli 10.0869]
 gi|408592029|gb|EKK66422.1| carbamoyl-phosphate synthase large chain [Escherichia coli 8.2524]
 gi|408593780|gb|EKK68088.1| carbamoyl-phosphate synthase large chain [Escherichia coli 10.0833]
 gi|408614140|gb|EKK87423.1| carbamoyl-phosphate synthase large chain [Escherichia coli 88.0221]
 gi|408618241|gb|EKK91328.1| carbamoyl-phosphate synthase large chain [Escherichia coli 10.0821]
 gi|427215735|gb|EKV84901.1| carbamoyl-phosphate synthase large chain [Escherichia coli 88.1042]
 gi|427219176|gb|EKV88145.1| carbamoyl-phosphate synthase large chain [Escherichia coli 89.0511]
 gi|427219427|gb|EKV88389.1| carbamoyl-phosphate synthase large chain [Escherichia coli 88.1467]
 gi|427222792|gb|EKV91556.1| carbamoyl-phosphate synthase large chain [Escherichia coli 90.0039]
 gi|427235450|gb|EKW03071.1| carbamoyl-phosphate synthase large chain [Escherichia coli 90.2281]
 gi|427237881|gb|EKW05403.1| carbamoyl-phosphate synthase large chain [Escherichia coli 90.0091]
 gi|427252262|gb|EKW18751.1| carbamoyl-phosphate synthase large chain [Escherichia coli 93.0056]
 gi|427254236|gb|EKW20604.1| carbamoyl-phosphate synthase large chain [Escherichia coli 93.0055]
 gi|427255142|gb|EKW21413.1| carbamoyl-phosphate synthase large chain [Escherichia coli 94.0618]
 gi|427271608|gb|EKW36399.1| carbamoyl-phosphate synthase large chain [Escherichia coli 95.0943]
 gi|427272159|gb|EKW36912.1| carbamoyl-phosphate synthase large chain [Escherichia coli 95.0183]
 gi|427279235|gb|EKW43684.1| carbamoyl-phosphate synthase large chain [Escherichia coli 95.1288]
 gi|427287449|gb|EKW51211.1| carbamoyl-phosphate synthase large chain [Escherichia coli 96.0428]
 gi|427293289|gb|EKW56543.1| carbamoyl-phosphate synthase large chain [Escherichia coli 96.0427]
 gi|427294868|gb|EKW58022.1| carbamoyl-phosphate synthase large chain [Escherichia coli 96.0939]
 gi|427305566|gb|EKW68160.1| carbamoyl-phosphate synthase large chain [Escherichia coli 97.0003]
 gi|427307977|gb|EKW70396.1| carbamoyl-phosphate synthase large chain [Escherichia coli 96.0932]
 gi|427312289|gb|EKW74445.1| carbamoyl-phosphate synthase large chain [Escherichia coli 96.0107]
 gi|427323191|gb|EKW84793.1| carbamoyl-phosphate synthase large chain [Escherichia coli 97.1742]
 gi|427323668|gb|EKW85222.1| carbamoyl-phosphate synthase large chain [Escherichia coli 97.0007]
 gi|427335374|gb|EKW96404.1| carbamoyl-phosphate synthase large chain [Escherichia coli 99.0713]
 gi|427335775|gb|EKW96804.1| carbamoyl-phosphate synthase large chain [Escherichia coli 99.0678]
 gi|427337233|gb|EKW98151.1| carbamoyl-phosphate synthase large chain [Escherichia coli 99.0672]
 gi|429260714|gb|EKY44245.1| carbamoyl-phosphate synthase large chain [Escherichia coli 96.0109]
 gi|429262434|gb|EKY45774.1| carbamoyl-phosphate synthase large chain [Escherichia coli 97.0010]
 gi|430923540|gb|ELC44275.1| carbamoyl-phosphate synthase large chain [Escherichia coli KTE21]
 gi|431058153|gb|ELD67562.1| carbamoyl-phosphate synthase large chain [Escherichia coli KTE233]
 gi|431175028|gb|ELE75059.1| carbamoyl-phosphate synthase large chain [Escherichia coli KTE81]
 gi|431232495|gb|ELF28161.1| carbamoyl-phosphate synthase large chain [Escherichia coli KTE161]
 gi|431464531|gb|ELH44650.1| carbamoyl-phosphate synthase large chain [Escherichia coli KTE196]
 gi|431561175|gb|ELI34559.1| carbamoyl-phosphate synthase large chain [Escherichia coli KTE117]
 gi|444543355|gb|ELV22617.1| carbamoyl-phosphate synthase large chain [Escherichia coli 99.0814]
 gi|444552348|gb|ELV30186.1| carbamoyl-phosphate synthase large chain [Escherichia coli
            09BKT078844]
 gi|444552760|gb|ELV30532.1| carbamoyl-phosphate synthase large chain [Escherichia coli 99.0815]
 gi|444566073|gb|ELV42909.1| carbamoyl-phosphate synthase large chain [Escherichia coli 99.0839]
 gi|444568328|gb|ELV45003.1| carbamoyl-phosphate synthase large chain [Escherichia coli 99.0816]
 gi|444572879|gb|ELV49280.1| carbamoyl-phosphate synthase large chain [Escherichia coli 99.0848]
 gi|444583735|gb|ELV59423.1| carbamoyl-phosphate synthase large chain [Escherichia coli 99.1753]
 gi|444587140|gb|ELV62610.1| carbamoyl-phosphate synthase large chain [Escherichia coli 99.1793]
 gi|444600974|gb|ELV75783.1| carbamoyl-phosphate synthase large chain [Escherichia coli ATCC
            700728]
 gi|444601305|gb|ELV76112.1| carbamoyl-phosphate synthase large chain [Escherichia coli PA11]
 gi|444602085|gb|ELV76840.1| carbamoyl-phosphate synthase large chain [Escherichia coli PA13]
 gi|444610120|gb|ELV84550.1| carbamoyl-phosphate synthase large chain [Escherichia coli 99.1805]
 gi|444616446|gb|ELV90608.1| carbamoyl-phosphate synthase large chain [Escherichia coli PA19]
 gi|444618919|gb|ELV92984.1| carbamoyl-phosphate synthase large chain [Escherichia coli PA48]
 gi|444625078|gb|ELV98949.1| carbamoyl-phosphate synthase large chain [Escherichia coli PA2]
 gi|444633947|gb|ELW07438.1| carbamoyl-phosphate synthase large chain [Escherichia coli PA47]
 gi|444639250|gb|ELW12569.1| carbamoyl-phosphate synthase large chain [Escherichia coli PA8]
 gi|444649046|gb|ELW21952.1| carbamoyl-phosphate synthase large chain [Escherichia coli 7.1982]
 gi|444651205|gb|ELW24014.1| carbamoyl-phosphate synthase large chain [Escherichia coli 99.1781]
 gi|444655233|gb|ELW27852.1| carbamoyl-phosphate synthase large chain [Escherichia coli 99.1762]
 gi|444664409|gb|ELW36597.1| carbamoyl-phosphate synthase large chain [Escherichia coli PA35]
 gi|444668695|gb|ELW40695.1| carbamoyl-phosphate synthase large chain [Escherichia coli 3.4880]
 gi|444673593|gb|ELW45219.1| carbamoyl-phosphate synthase large chain [Escherichia coli 95.0083]
 gi|444675034|gb|ELW46515.1| carbamoyl-phosphate synthase large chain [Escherichia coli 99.0670]
          Length = 1073

 Score = 1224 bits (3166), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 617/1071 (57%), Positives = 781/1071 (72%), Gaps = 19/1071 (1%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILILGAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  E+V +++EKERPDA+LPTMGGQTALN A+ L   G LE++GV +IGA  DA
Sbjct: 63   ATYIEPIHWEVVRKIIEKERPDAVLPTMGGQTALNCALELERQGVLEEFGVTMIGATADA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  F  AMK IG++T  SGI +T++E +++A ++G FP IIRP+FT+GG+GGGI
Sbjct: 123  IDKAEDRRRFDVAMKKIGLETARSGIAHTMEEALAVAADVG-FPCIIRPSFTMGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEFE IC  GL  S T ++L+++SL+GWKEYE+EV+RD  DN +I+CSIEN D MG
Sbjct: 182  AYNREEFEEICARGLDLSPTKELLIDESLIGWKEYEMEVVRDKNDNCIIVCSIENFDAMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            +HTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGVE GGSNVQFAVNP +G ++VIEMN
Sbjct: 242  IHTGDSITVAPAQTLTDKEYQIMRNASMAVLREIGVETGGSNVQFAVNPKNGRLIVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT  +TPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGYTLDELMNDITGGRTPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            F FEKF G+   LTTQMKSVGE MA+GRT QES QKALR LE G +G+      +     
Sbjct: 362  FNFEKFAGANDRLTTQMKSVGEVMAIGRTQQESLQKALRGLEVGATGFDPKVSLDDPEAL 421

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
             +++  L+    +R+  I  A + G+ VD +  L+ ID+WFL Q +EL+ +E+ +    +
Sbjct: 422  TKIRRELKDAGAERIWYIADAFRAGLSVDGVFNLTNIDRWFLVQIEELVRLEEKVAEVGI 481

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
            + +  +   ++KR+GF+D ++A      E E+R+ R    + P YKRVDTCAAEF  +T 
Sbjct: 482  TGLNAEFLRQLKRKGFADARLAKLAGVREAEIRKLRDQYDLHPVYKRVDTCAAEFATDTA 541

Query: 627  YMYSSYDFECESAP-TQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNS 685
            YMYS+Y+ ECE+ P T ++K+++LGGGPNRIGQGIEFDYCC H S +L+  GYETIM+N 
Sbjct: 542  YMYSTYEEECEANPSTDREKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVNC 601

Query: 686  NPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEH 745
            NPETVSTDYDTSDRLYFEP+T+EDVL ++ +E+P+G+IVQ+GGQTPLKL+          
Sbjct: 602  NPETVSTDYDTSDRLYFEPVTLEDVLEIVRIEKPKGVIVQYGGQTPLKLA---------- 651

Query: 746  RLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEI 805
            R   A+G   V + GTSPD+ID AEDRERF   +  L ++QP      +   A+  AKEI
Sbjct: 652  RALEAAG---VPVIGTSPDAIDRAEDRERFQHAVDRLKLKQPANATVTAIEMAVEKAKEI 708

Query: 806  GYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALA 865
            GYP+VVRPSYVLGGRAMEIVY +  L  Y + AV V  + PVL+D +L DA+E+DVDA+ 
Sbjct: 709  GYPLVVRPSYVLGGRAMEIVYDEADLRRYFQTAVSVSNDAPVLLDHFLDDAVEVDVDAIC 768

Query: 866  DSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMN 925
            D    V+IGGIMEHIEQAGVHSGDSAC +P  T+S    D +     KLA  L V GLMN
Sbjct: 769  DG-EMVLIGGIMEHIEQAGVHSGDSACSLPAYTLSQEIQDVMRQQVQKLAFELQVRGLMN 827

Query: 926  CQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPK 985
             Q+A+  + +VYL+E NPRA+RTVPFVSKA G PLAK AA VM+GKSL + G TKEVIP 
Sbjct: 828  VQFAVKNN-EVYLIEVNPRAARTVPFVSKATGVPLAKVAARVMAGKSLAEQGVTKEVIPP 886

Query: 986  HVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVF 1045
            + SVKE VLPF KF G D LLGPEMRSTGEVMG+  +F  AFAKAQ+ +   +   G   
Sbjct: 887  YYSVKEVVLPFNKFPGVDPLLGPEMRSTGEVMGVGRTFAEAFAKAQLGSNSTMKKHGRAL 946

Query: 1046 LSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVA 1105
            LS+ +  K  +  +A   L  GF++ +T GTA  L   GI    V K+HEGRPH  D + 
Sbjct: 947  LSVREGDKERVVDLAAKLLKQGFELDATHGTAIVLGEAGINPRLVNKVHEGRPHIQDRIK 1006

Query: 1106 NGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRS 1156
            NG+   ++ T+SG    + D   +RR  L YKV   TT++G  A A A+ +
Sbjct: 1007 NGEYTYIINTTSGRRAIE-DSRVIRRSALQYKVHYDTTLNGGFATAMALNA 1056


>gi|417288206|ref|ZP_12075492.1| carbamoyl-phosphate synthase, large subunit [Escherichia coli
            TW07793]
 gi|386248991|gb|EII95163.1| carbamoyl-phosphate synthase, large subunit [Escherichia coli
            TW07793]
          Length = 1073

 Score = 1224 bits (3166), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 619/1072 (57%), Positives = 782/1072 (72%), Gaps = 21/1072 (1%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILILGAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  E+V +++EKERPDA+LPTMGGQTALN A+ L   G LE++GV +IGA  DA
Sbjct: 63   ATYIEPIHWEVVRKIIEKERPDAVLPTMGGQTALNCALELERQGVLEEFGVTMIGATADA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  F  AMK IG++T  SGI ++++E +++A E+G FP IIRP+FT+GG+GGGI
Sbjct: 123  IDKAEDRRRFDVAMKKIGLETARSGIAHSMEEALAVAAEVG-FPCIIRPSFTMGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEFE IC  GL  S T ++L+++SL+GWKEYE+EV+RD  DN +I+CSIEN D MG
Sbjct: 182  AYNREEFEEICARGLDLSPTKELLIDESLIGWKEYEMEVVRDKNDNCIIVCSIENFDAMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            +HTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGVE GGSNVQFAVNP +G ++VIEMN
Sbjct: 242  IHTGDSITVAPAQTLTDKEYQIMRNASMAVLREIGVETGGSNVQFAVNPKNGRLIVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT  +TPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGYTLDELMNDITGGRTPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            F FEKF G+   LTTQMKSVGE MA+GRT QES QKALR LE G +G+      +     
Sbjct: 362  FNFEKFAGANDRLTTQMKSVGEVMAIGRTQQESLQKALRGLEVGATGFDPKVSLDDPEAL 421

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
             +++  L+    +R+  I  A + G+ VD +  L+ ID+WFL Q +EL+ +E+ +    +
Sbjct: 422  TKIRRELKDAGAERIWYIADAFRAGLSVDGVFNLTNIDRWFLVQIEELVRLEEKVAEVGI 481

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
            + +  D   ++KR+GF+D ++A      E E+R+ R    + P YKRVDTCAAEF  +T 
Sbjct: 482  TGLNADFLRQLKRKGFADARLAKLAGVREAEIRKLRDQYDLHPVYKRVDTCAAEFATDTA 541

Query: 627  YMYSSYDFECESAP-TQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNS 685
            YMYS+Y+ ECE+ P T ++K+++LGGGPNRIGQGIEFDYCC H S +L+  GYETIM+N 
Sbjct: 542  YMYSTYEEECEANPSTDREKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVNC 601

Query: 686  NPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEH 745
            NPETVSTDYDTSDRLYFEP+T+EDVL ++ +E+P+G+IVQ+GGQTPLKL+          
Sbjct: 602  NPETVSTDYDTSDRLYFEPVTLEDVLEIVRIEKPKGVIVQYGGQTPLKLA---------- 651

Query: 746  RLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEI 805
            R   A+G   V + GTS D+ID AEDRERF   ++ L ++QP      +   A+  AKEI
Sbjct: 652  RALEAAG---VPVIGTSSDAIDRAEDRERFQHAVERLKLKQPANATVTTIEMAVEKAKEI 708

Query: 806  GYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALA 865
            GYP+VVRPSYVLGGRAMEIVY +  L  Y + AV V  + PVL+D +L DA+E+DVDA+ 
Sbjct: 709  GYPLVVRPSYVLGGRAMEIVYDEADLRRYFQTAVSVSNDAPVLLDHFLDDAVEVDVDAIC 768

Query: 866  DSCGNVV-IGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLM 924
            D  G VV IGGIMEHIEQAGVHSGDSAC +P  T+S    D +     KLA  L V GLM
Sbjct: 769  D--GEVVLIGGIMEHIEQAGVHSGDSACSLPAYTLSQEIQDVMRQQVQKLAFELQVRGLM 826

Query: 925  NCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIP 984
            N Q+A+  + +VYL+E NPRA+RTVPFVSKA G PLAK AA VM+GKSL + G TKEVIP
Sbjct: 827  NVQFAVKNN-EVYLIEVNPRAARTVPFVSKATGVPLAKVAARVMAGKSLAEQGVTKEVIP 885

Query: 985  KHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTV 1044
             + SVKE VLPF KF G D LLGPEMRSTGEVMG+  +F  AFAKAQ+ +   +   G  
Sbjct: 886  PYYSVKEVVLPFNKFPGVDPLLGPEMRSTGEVMGVGRTFAEAFAKAQLGSNSTMKKHGRA 945

Query: 1045 FLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMV 1104
             LS+ +  K  +  +A   L  GF++ +T GTA  L   GI    V K+HEGRPH  D +
Sbjct: 946  LLSVREGDKERVVDLAAKLLKQGFELDATHGTAIVLGEAGINPRLVNKVHEGRPHIQDRI 1005

Query: 1105 ANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRS 1156
             NG+   ++ T+SG    + D   +RR  L YKV   TT++G  A A A+ +
Sbjct: 1006 KNGEYTYIINTTSGRRAIE-DSRVIRRSALQYKVHYDTTLNGGFATAMALNA 1056


>gi|215485194|ref|YP_002327625.1| carbamoyl phosphate synthase large subunit [Escherichia coli O127:H6
            str. E2348/69]
 gi|306815369|ref|ZP_07449518.1| carbamoyl phosphate synthase large subunit [Escherichia coli NC101]
 gi|312966153|ref|ZP_07780379.1| carbamoyl-phosphate synthase large chain [Escherichia coli 2362-75]
 gi|331661071|ref|ZP_08362003.1| carbamoyl-phosphate synthase, large subunit [Escherichia coli TA206]
 gi|415837711|ref|ZP_11519723.1| carbamoyl-phosphate synthase large chain [Escherichia coli RN587/1]
 gi|417284497|ref|ZP_12071792.1| carbamoyl-phosphate synthase, large subunit [Escherichia coli 3003]
 gi|417753842|ref|ZP_12401939.1| carB [Escherichia coli DEC2B]
 gi|418995145|ref|ZP_13542765.1| carB [Escherichia coli DEC1A]
 gi|419000182|ref|ZP_13547749.1| carB [Escherichia coli DEC1B]
 gi|419005742|ref|ZP_13553200.1| carB [Escherichia coli DEC1C]
 gi|419011575|ref|ZP_13558945.1| carbamoyl-phosphate synthase large chain [Escherichia coli DEC1D]
 gi|419016509|ref|ZP_13563837.1| carB [Escherichia coli DEC1E]
 gi|419022104|ref|ZP_13569353.1| carbamoyl-phosphate synthase large chain [Escherichia coli DEC2A]
 gi|419026997|ref|ZP_13574201.1| carB [Escherichia coli DEC2C]
 gi|419033034|ref|ZP_13580135.1| carB [Escherichia coli DEC2D]
 gi|419037778|ref|ZP_13584841.1| carB [Escherichia coli DEC2E]
 gi|419698955|ref|ZP_14226579.1| carbamoyl phosphate synthase large subunit [Escherichia coli SCI-07]
 gi|422380368|ref|ZP_16460546.1| carbamoyl-phosphate synthase, large subunit [Escherichia coli MS
            57-2]
 gi|425275895|ref|ZP_18667252.1| carbamoyl-phosphate synthase large chain [Escherichia coli ARS4.2123]
 gi|432384588|ref|ZP_19627501.1| carbamoyl-phosphate synthase large chain [Escherichia coli KTE15]
 gi|432385418|ref|ZP_19628320.1| carbamoyl-phosphate synthase large chain [Escherichia coli KTE16]
 gi|432420144|ref|ZP_19662705.1| carbamoyl-phosphate synthase large chain [Escherichia coli KTE178]
 gi|432430191|ref|ZP_19672641.1| carbamoyl-phosphate synthase large chain [Escherichia coli KTE187]
 gi|432512228|ref|ZP_19749475.1| carbamoyl-phosphate synthase large chain [Escherichia coli KTE224]
 gi|432557051|ref|ZP_19793747.1| carbamoyl-phosphate synthase large chain [Escherichia coli KTE49]
 gi|432609738|ref|ZP_19845914.1| carbamoyl-phosphate synthase large chain [Escherichia coli KTE72]
 gi|432644441|ref|ZP_19880248.1| carbamoyl-phosphate synthase large chain [Escherichia coli KTE86]
 gi|432654075|ref|ZP_19889797.1| carbamoyl-phosphate synthase large chain [Escherichia coli KTE93]
 gi|432697338|ref|ZP_19932514.1| carbamoyl-phosphate synthase large chain [Escherichia coli KTE169]
 gi|432708865|ref|ZP_19943936.1| carbamoyl-phosphate synthase large chain [Escherichia coli KTE6]
 gi|432730753|ref|ZP_19965614.1| carbamoyl-phosphate synthase large chain [Escherichia coli KTE45]
 gi|432743957|ref|ZP_19978666.1| carbamoyl-phosphate synthase large chain [Escherichia coli KTE43]
 gi|432762303|ref|ZP_19996768.1| carbamoyl-phosphate synthase large chain [Escherichia coli KTE46]
 gi|432842291|ref|ZP_20075720.1| carbamoyl-phosphate synthase large chain [Escherichia coli KTE141]
 gi|432902333|ref|ZP_20112081.1| carbamoyl-phosphate synthase large chain [Escherichia coli KTE194]
 gi|432941727|ref|ZP_20139225.1| carbamoyl-phosphate synthase large chain [Escherichia coli KTE183]
 gi|432970169|ref|ZP_20159051.1| carbamoyl-phosphate synthase large chain [Escherichia coli KTE207]
 gi|432983755|ref|ZP_20172497.1| carbamoyl-phosphate synthase large chain [Escherichia coli KTE215]
 gi|433036958|ref|ZP_20224586.1| carbamoyl-phosphate synthase large chain [Escherichia coli KTE113]
 gi|433080937|ref|ZP_20267417.1| carbamoyl-phosphate synthase large chain [Escherichia coli KTE133]
 gi|433099570|ref|ZP_20285692.1| carbamoyl-phosphate synthase large chain [Escherichia coli KTE145]
 gi|433142530|ref|ZP_20327716.1| carbamoyl-phosphate synthase large chain [Escherichia coli KTE168]
 gi|433191354|ref|ZP_20375421.1| carbamoyl-phosphate synthase large chain [Escherichia coli KTE88]
 gi|433210678|ref|ZP_20394325.1| carbamoyl-phosphate synthase large chain [Escherichia coli KTE97]
 gi|215263266|emb|CAS07581.1| carbamoyl-phosphate synthase large subunit [Escherichia coli O127:H6
            str. E2348/69]
 gi|305851031|gb|EFM51486.1| carbamoyl phosphate synthase large subunit [Escherichia coli NC101]
 gi|312289396|gb|EFR17290.1| carbamoyl-phosphate synthase large chain [Escherichia coli 2362-75]
 gi|323190287|gb|EFZ75563.1| carbamoyl-phosphate synthase large chain [Escherichia coli RN587/1]
 gi|324008377|gb|EGB77596.1| carbamoyl-phosphate synthase, large subunit [Escherichia coli MS
            57-2]
 gi|331052113|gb|EGI24152.1| carbamoyl-phosphate synthase, large subunit [Escherichia coli TA206]
 gi|377850512|gb|EHU15474.1| carB [Escherichia coli DEC1A]
 gi|377851483|gb|EHU16428.1| carB [Escherichia coli DEC1C]
 gi|377855110|gb|EHU19985.1| carB [Escherichia coli DEC1B]
 gi|377865109|gb|EHU29901.1| carbamoyl-phosphate synthase large chain [Escherichia coli DEC1D]
 gi|377867716|gb|EHU32470.1| carB [Escherichia coli DEC1E]
 gi|377869187|gb|EHU33904.1| carbamoyl-phosphate synthase large chain [Escherichia coli DEC2A]
 gi|377880772|gb|EHU45338.1| carB [Escherichia coli DEC2B]
 gi|377884965|gb|EHU49473.1| carB [Escherichia coli DEC2D]
 gi|377886233|gb|EHU50715.1| carB [Escherichia coli DEC2C]
 gi|377899286|gb|EHU63634.1| carB [Escherichia coli DEC2E]
 gi|380349839|gb|EIA38103.1| carbamoyl phosphate synthase large subunit [Escherichia coli SCI-07]
 gi|386242706|gb|EII84441.1| carbamoyl-phosphate synthase, large subunit [Escherichia coli 3003]
 gi|408207843|gb|EKI32553.1| carbamoyl-phosphate synthase large chain [Escherichia coli ARS4.2123]
 gi|430901811|gb|ELC23707.1| carbamoyl-phosphate synthase large chain [Escherichia coli KTE15]
 gi|430910946|gb|ELC32244.1| carbamoyl-phosphate synthase large chain [Escherichia coli KTE16]
 gi|430948150|gb|ELC67831.1| carbamoyl-phosphate synthase large chain [Escherichia coli KTE178]
 gi|430957497|gb|ELC76149.1| carbamoyl-phosphate synthase large chain [Escherichia coli KTE187]
 gi|431045358|gb|ELD55591.1| carbamoyl-phosphate synthase large chain [Escherichia coli KTE224]
 gi|431095074|gb|ELE00697.1| carbamoyl-phosphate synthase large chain [Escherichia coli KTE49]
 gi|431152369|gb|ELE53320.1| carbamoyl-phosphate synthase large chain [Escherichia coli KTE72]
 gi|431185445|gb|ELE85174.1| carbamoyl-phosphate synthase large chain [Escherichia coli KTE86]
 gi|431196123|gb|ELE95068.1| carbamoyl-phosphate synthase large chain [Escherichia coli KTE93]
 gi|431247527|gb|ELF41748.1| carbamoyl-phosphate synthase large chain [Escherichia coli KTE169]
 gi|431253504|gb|ELF46983.1| carbamoyl-phosphate synthase large chain [Escherichia coli KTE6]
 gi|431278767|gb|ELF69740.1| carbamoyl-phosphate synthase large chain [Escherichia coli KTE45]
 gi|431296330|gb|ELF86042.1| carbamoyl-phosphate synthase large chain [Escherichia coli KTE43]
 gi|431302498|gb|ELF91678.1| carbamoyl-phosphate synthase large chain [Escherichia coli KTE46]
 gi|431399067|gb|ELG82486.1| carbamoyl-phosphate synthase large chain [Escherichia coli KTE141]
 gi|431438462|gb|ELH19836.1| carbamoyl-phosphate synthase large chain [Escherichia coli KTE194]
 gi|431456328|gb|ELH36672.1| carbamoyl-phosphate synthase large chain [Escherichia coli KTE183]
 gi|431487611|gb|ELH67255.1| carbamoyl-phosphate synthase large chain [Escherichia coli KTE207]
 gi|431507821|gb|ELH86103.1| carbamoyl-phosphate synthase large chain [Escherichia coli KTE215]
 gi|431557066|gb|ELI30840.1| carbamoyl-phosphate synthase large chain [Escherichia coli KTE113]
 gi|431607189|gb|ELI76559.1| carbamoyl-phosphate synthase large chain [Escherichia coli KTE133]
 gi|431624387|gb|ELI93007.1| carbamoyl-phosphate synthase large chain [Escherichia coli KTE145]
 gi|431667910|gb|ELJ34486.1| carbamoyl-phosphate synthase large chain [Escherichia coli KTE168]
 gi|431699423|gb|ELJ64428.1| carbamoyl-phosphate synthase large chain [Escherichia coli KTE88]
 gi|431726549|gb|ELJ90358.1| carbamoyl-phosphate synthase large chain [Escherichia coli KTE97]
          Length = 1073

 Score = 1224 bits (3166), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 617/1071 (57%), Positives = 782/1071 (73%), Gaps = 19/1071 (1%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILILGAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  E+V +++EKERPDA+LPTMGGQTALN A+ L   G LE++GV +IGA  DA
Sbjct: 63   ATYIEPIHWEVVRKIIEKERPDAVLPTMGGQTALNCALELERQGVLEEFGVTMIGATADA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  F  AMK IG++T  SGI ++++E +++A E+G FP IIRP+FT+GG+GGGI
Sbjct: 123  IDKAEDRRRFDVAMKKIGLETARSGIAHSMEEALAVAAEVG-FPCIIRPSFTMGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEFE IC  GL  S T ++L+++SL+GWKEYE+EV+RD  DN +I+CSIEN D MG
Sbjct: 182  AYNREEFEEICARGLDLSPTKELLIDESLIGWKEYEMEVVRDKNDNCIIVCSIENFDAMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            +HTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGVE GGSNVQFAVNP +G ++VIEMN
Sbjct: 242  IHTGDSITVAPAQTLTDKEYQIMRNASMAVLREIGVETGGSNVQFAVNPKNGRLIVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT  +TPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGYTLDELMNDITGGRTPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            F FEKF G+   LTTQMKSVGE MA+GRT QES QKALR LE G +G+      +     
Sbjct: 362  FNFEKFAGANDRLTTQMKSVGEVMAIGRTQQESLQKALRGLEVGATGFDPKVSLDDPEAL 421

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
             +++  L+    +R+  I  A + G+ VD +  L+ ID+WFL Q +EL+ +E+ +    +
Sbjct: 422  TKIRRELKDAGAERIWYIADAFRAGLSVDGVFNLTNIDRWFLVQIEELVRLEEKVAEVGI 481

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
            + +  +   ++KR+GF+D ++A      E E+R+ R    + P YKRVDTCAAEF  +T 
Sbjct: 482  TGLNAEFLRQLKRKGFADARLAKLAGVREAEIRKLRDQYDLHPVYKRVDTCAAEFATDTA 541

Query: 627  YMYSSYDFECESAP-TQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNS 685
            YMYS+Y+ ECE+ P T ++K+++LGGGPNRIGQGIEFDYCC H S +L+  GYETIM+N 
Sbjct: 542  YMYSTYEEECEANPSTDREKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVNC 601

Query: 686  NPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEH 745
            NPETVSTDYDTSDRLYFEP+T+EDVL ++ +E+P+G+IVQ+GGQTPLKL+          
Sbjct: 602  NPETVSTDYDTSDRLYFEPVTLEDVLEIVRIEKPKGVIVQYGGQTPLKLA---------- 651

Query: 746  RLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEI 805
            R   A+G   V + GTSPD+ID AEDRERF   ++ L ++QP      +   A+  AKEI
Sbjct: 652  RALEAAG---VPVIGTSPDAIDRAEDRERFQHAVERLKLKQPANATVTTIEMAVEKAKEI 708

Query: 806  GYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALA 865
            GYP+VVRPSYVLGGRAMEIVY +  L  Y + AV V  + PVL+D +L DA+E+DVDA+ 
Sbjct: 709  GYPLVVRPSYVLGGRAMEIVYDEADLRRYFQTAVSVSNDAPVLLDHFLDDAVEVDVDAIC 768

Query: 866  DSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMN 925
            D    V+IGGIMEHIEQAGVHSGDSAC +P  T+S    D +     KLA  L V GLMN
Sbjct: 769  DG-EMVLIGGIMEHIEQAGVHSGDSACSLPAYTLSQEIQDVMRQQVQKLAFELQVRGLMN 827

Query: 926  CQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPK 985
             Q+A+  + +VYL+E NPRA+RTVPFVSKA G PLAK AA VM+GKSL + G TKEVIP 
Sbjct: 828  VQFAVKNN-EVYLIEVNPRAARTVPFVSKATGVPLAKVAARVMAGKSLAEQGVTKEVIPP 886

Query: 986  HVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVF 1045
            + SVKE VLPF KF G D LLGPEMRSTGEVMG+  +F  AFAKAQ+ +   +   G   
Sbjct: 887  YYSVKEVVLPFNKFPGVDPLLGPEMRSTGEVMGVGRTFAEAFAKAQLGSNSTMKKHGRAL 946

Query: 1046 LSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVA 1105
            LS+ +  K  +  +A   L  GF++ +T GTA  L   GI    V K+HEGRPH  D + 
Sbjct: 947  LSVREGDKERVVDLAAKLLKQGFELDATHGTAIVLGEAGINPRLVNKVHEGRPHIQDRIK 1006

Query: 1106 NGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRS 1156
            NG+   ++ T+SG    + D   +RR  L YKV   TT++G  A A A+ +
Sbjct: 1007 NGEYTYIINTTSGRRAIE-DSRVIRRSALQYKVHYDTTLNGGFATAMALNA 1056


>gi|424032014|ref|ZP_17771435.1| carbamoyl-phosphate synthase large chain [Vibrio cholerae HENC-01]
 gi|424040194|ref|ZP_17778407.1| carbamoyl-phosphate synthase large chain [Vibrio cholerae HENC-02]
 gi|408876426|gb|EKM15543.1| carbamoyl-phosphate synthase large chain [Vibrio cholerae HENC-01]
 gi|408892125|gb|EKM29722.1| carbamoyl-phosphate synthase large chain [Vibrio cholerae HENC-02]
          Length = 1077

 Score = 1224 bits (3166), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 615/1079 (56%), Positives = 782/1079 (72%), Gaps = 22/1079 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILILGAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIQSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPDMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  E+V  ++ KE+PDA+LPTMGGQTALN A+ L + G LE++GVE+IGA  DA
Sbjct: 63   ATYIEPIQWEVVRNIIAKEKPDAVLPTMGGQTALNCALDLEKYGVLEEFGVEMIGATADA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  F +AMK+IG++ P +    T++E  ++ + +G FP IIRP+FT+GGTGGGI
Sbjct: 123  IDKAEDRSRFDKAMKSIGLECPRADTAKTMEEAYAVLDMVG-FPCIIRPSFTMGGTGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYNKEEFE IC+ GL  S T+++L+++SL+GWKEYE+EV+RD ADN +I+C+IEN DPMG
Sbjct: 182  AYNKEEFEEICRRGLDLSPTNELLIDESLIGWKEYEMEVVRDKADNCIIVCAIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            +HTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGVE GGSNVQF +NP DG +++IEMN
Sbjct: 242  IHTGDSITVAPAQTLTDKEYQLMRNASLAVLREIGVETGGSNVQFGINPKDGRMVIIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VG++LD++ NDIT   TPASFEP+IDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKIAAKLAVGFTLDELMNDITGGATPASFEPTIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWD- 505
            F FEKF G+   LTTQMKSVGE MA+GR  QES QKALR LE G +G+    + +LD   
Sbjct: 362  FNFEKFAGANDRLTTQMKSVGEVMAIGRNQQESLQKALRGLEVGATGF--DEMVDLDAPD 419

Query: 506  -WEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQ 564
               ++++ L+    +R+  I  A + GM VD +  L+ ID+WFL Q ++++ +EQ L  +
Sbjct: 420  ALTKIRHELKEAGAERIWYIADAFRAGMSVDGVFNLTQIDRWFLVQIEDIVKLEQELKAK 479

Query: 565  SVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEAN 624
              + + K++  ++KR+GF+D +++      E E+R  R    + P YKRVDTCAAEF ++
Sbjct: 480  GFAGLNKEELNKLKRKGFADARLSKILGVAESEIRRLRDQYDIHPVYKRVDTCAAEFSSD 539

Query: 625  TPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMN 684
            T YMYSSYD ECE+ PT K K++ILGGGPNRIGQGIEFDYCC H S +L+  GYETIM+N
Sbjct: 540  TAYMYSSYDDECEANPTDKDKIMILGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVN 599

Query: 685  SNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDE 744
             NPETVSTDYDTSDRLYFEP+T+EDVL +  +E+P+G+IVQ+GGQTPLKL+         
Sbjct: 600  CNPETVSTDYDTSDRLYFEPVTLEDVLAIARVEKPKGVIVQYGGQTPLKLA--------- 650

Query: 745  HRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKE 804
             R   A+G   V I GTSPD+ID AEDRERF   +  L + QP+     +   A+  ++E
Sbjct: 651  -RALEAAG---VPIIGTSPDAIDRAEDRERFQVAVDRLGLLQPENATVTTMEQAVEKSRE 706

Query: 805  IGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDAL 864
            IGYP+VVRPSYVLGGRAMEIVY ++ L  Y   AV V  E PVL+D +L DA+E+D+DA+
Sbjct: 707  IGYPLVVRPSYVLGGRAMEIVYDEQDLRRYFNEAVSVSNESPVLLDSFLDDAVEVDIDAI 766

Query: 865  ADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLM 924
             D    VVIGGIMEHIEQAGVHSGDSAC +P  T+S    D +     KLA  L V GLM
Sbjct: 767  CDG-ERVVIGGIMEHIEQAGVHSGDSACSLPAYTLSQEIQDVMREQVEKLAFELGVRGLM 825

Query: 925  NCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIP 984
            N Q+A+  +  VYL+E NPRA+RTVPFVSKA G P+AK AA VM+G+SL   GFTKE+IP
Sbjct: 826  NTQFAVKNN-QVYLIEVNPRAARTVPFVSKATGAPIAKIAARVMAGQSLESQGFTKEIIP 884

Query: 985  KHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTV 1044
             + SVKE VLPF KF G D LLGPEMRSTGEVMG+  +F  A+AKA++  G   P  G  
Sbjct: 885  PYYSVKEVVLPFNKFPGVDPLLGPEMRSTGEVMGVGATFAEAYAKAELGCGNIYPEGGRA 944

Query: 1045 FLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMV 1104
             LS+    K  +  +A     +G+++ +T GTA  L   GI    V K+HEGRPH  D +
Sbjct: 945  LLSVRAGDKERVVDLASKLTKLGYQLDATHGTAVILGEAGINPRLVNKVHEGRPHILDRI 1004

Query: 1105 ANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTVT 1163
             N +   +V T++G    + D   LRR  LA KV   TT++ A A   A  +   +TVT
Sbjct: 1005 KNNEYTYIVNTAAGRQAIE-DSKVLRRGALAEKVNYTTTLNAAFATCMAHTADAKSTVT 1062



 Score =  250 bits (639), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 170/483 (35%), Positives = 263/483 (54%), Gaps = 37/483 (7%)

Query: 67  KIDS-SAELSNGAA----SSKDQKLGKRTDLRKILILGAGPIVIGQACEFDYSGTQACKA 121
           ++D+ +AE S+  A    S  D+     TD  KI+ILG GP  IGQ  EFDY    A  A
Sbjct: 528 RVDTCAAEFSSDTAYMYSSYDDECEANPTDKDKIMILGGGPNRIGQGIEFDYCCVHASLA 587

Query: 122 LKEEGYEVILINSNPATIMTDPGLADRTYITPMTPELVEQVLEKERPDALLPTMGGQTAL 181
           L+E+GYE I++N NP T+ TD   +DR Y  P+T E V  +   E+P  ++   GGQT L
Sbjct: 588 LREDGYETIMVNCNPETVSTDYDTSDRLYFEPVTLEDVLAIARVEKPKGVIVQYGGQTPL 647

Query: 182 NLAVALAESGALEKYGVELIGAKLDAIKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECI 241
            LA       ALE  GV +IG   DAI +AEDR+ F+ A+  +G+  P +    T+++ +
Sbjct: 648 KLA------RALEAAGVPIIGTSPDAIDRAEDRERFQVAVDRLGLLQPENATVTTMEQAV 701

Query: 242 SIANEIGEFPLIIRPAFTLGGTGGGIAYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKE 301
             + EIG +PL++RP++ LGG    I Y++++        ++ S  S VL++  L    E
Sbjct: 702 EKSREIG-YPLVVRPSYVLGGRAMEIVYDEQDLRRYFNEAVSVSNESPVLLDSFLDDAVE 760

Query: 302 YELEVMRDLADNVVIICSIENVDPMGVHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREI 361
            +++ + D  + VVI   +E+++  GVH+GDS    PA TL+ +    +R+    +  E+
Sbjct: 761 VDIDAICD-GERVVIGGIMEHIEQAGVHSGDSACSLPAYTLSQEIQDVMREQVEKLAFEL 819

Query: 362 GVECGGSNVQFAVNPVDGEVMVIEMNPRVSRSSALASKATGFPIAKMAAKLSVGYSLDQI 421
           GV  G  N QFAV   + +V +IE+NPR +R+    SKATG PIAK+AA++  G SL+  
Sbjct: 820 GVR-GLMNTQFAVK--NNQVYLIEVNPRAARTVPFVSKATGAPIAKIAARVMAGQSLES- 875

Query: 422 PNDITKKTPASFEPSIDYVVTKIPRFAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQ 481
               TK+    +     Y V ++    F KFPG +PLL  +M+S GE M +G TF E++ 
Sbjct: 876 -QGFTKEIIPPY-----YSVKEVV-LPFNKFPGVDPLLGPEMRSTGEVMGVGATFAEAYA 928

Query: 482 KALRSLECGFSGWGCSNVKELDWDWEQLKYSLRVPNPDRMQAIYAAMKK-GMKVDEIHEL 540
           KA           GC N+     +  +   S+R  + +R+  + + + K G ++D  H  
Sbjct: 929 KA---------ELGCGNIYP---EGGRALLSVRAGDKERVVDLASKLTKLGYQLDATHGT 976

Query: 541 SFI 543
           + I
Sbjct: 977 AVI 979


>gi|262197388|ref|YP_003268597.1| carbamoyl-phosphate synthase large subunit [Haliangium ochraceum DSM
            14365]
 gi|262080735|gb|ACY16704.1| carbamoyl-phosphate synthase, large subunit [Haliangium ochraceum DSM
            14365]
          Length = 1077

 Score = 1224 bits (3166), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 615/1057 (58%), Positives = 772/1057 (73%), Gaps = 22/1057 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KR  L  +LI+G+GPIVIGQACEFDYSG QACKAL+EEG  VIL+NSNPATIMTDP +AD
Sbjct: 3    KRNHLESVLIIGSGPIVIGQACEFDYSGAQACKALREEGLRVILLNSNPATIMTDPEMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+T  ++E+V+E+ERP ALLPT+GGQTALNLA+A A +G  E+YGVELIGA +DA
Sbjct: 63   ATYIEPLTVGVLEKVIERERPSALLPTLGGQTALNLALAGARAGIFERYGVELIGASVDA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I+KAEDR+ FKQAM  IG +   S   ++L E  +   E+G FP I+RP+FT+GG GG I
Sbjct: 123  IEKAEDRERFKQAMNAIGERCCRSTHVSSLAEAQACIGEVG-FPAILRPSFTMGGAGGAI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN EEF+ + + GL  S   Q+LVE+S+LGWKEYELEVMRD ADNVVI+CSIEN DPMG
Sbjct: 182  AYNAEEFDHLVRRGLEQSPVHQILVEESVLGWKEYELEVMRDCADNVVIVCSIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            VHTGDSITVAPA TLTD+EYQR+RD + AIIREIGV+ GGSN+QFAV+P  GE +VIEMN
Sbjct: 242  VHTGDSITVAPALTLTDREYQRMRDAACAIIREIGVDTGGSNIQFAVDPATGEQIVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRF 447
            PRVSRSSALASKATGFPIAK+AAKL++GY+LD+IPNDIT+ TPASFEPSIDYVVTKIPRF
Sbjct: 302  PRVSRSSALASKATGFPIAKIAAKLAIGYTLDEIPNDITRVTPASFEPSIDYVVTKIPRF 361

Query: 448  AFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDWE 507
            AF+KFP ++P+L TQMK+VGE M++GRTF+ES  KA+RSLE G  G+      E D    
Sbjct: 362  AFDKFPAAQPILGTQMKAVGEVMSMGRTFRESLGKAIRSLETGRDGFDLPLPDEPD---- 417

Query: 508  QLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQ-SV 566
            ++   +  P+PDR+  +  AM+ G+  ++I  ++ ID WFL Q + ++ +E  +  Q  +
Sbjct: 418  EILRLMSTPSPDRIFQVAHAMRTGLPSEKIQRVTQIDPWFLAQVEAIVQLEGRVAAQGGL 477

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
              ++     + K  G SD++IA    S E EVR +R   G+ P YKRVDTCAAEFEA TP
Sbjct: 478  DELSDALLRQAKENGLSDRRIAALCGSDEHEVRARRKRSGIEPVYKRVDTCAAEFEARTP 537

Query: 627  YMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSN 686
            Y+YS+Y+ ECE+ PT  +KVLILGGGPNRIGQGIEFDYCC H + +L   GYE+IM+N N
Sbjct: 538  YLYSTYEEECEAEPTDARKVLILGGGPNRIGQGIEFDYCCVHAALALSEEGYESIMVNCN 597

Query: 687  PETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHR 746
            PETVSTDYDTSDRLYFEPLT+EDVL +   E PEG+IVQFGGQTPL+L+  +        
Sbjct: 598  PETVSTDYDTSDRLYFEPLTLEDVLAIYQREAPEGVIVQFGGQTPLRLAKGL-------- 649

Query: 747  LPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEIG 806
              +A+G   VR+ GT  D+ID AEDRERF  +++ L ++ P+ G+A+S  +A A+A++IG
Sbjct: 650  --AAAG---VRLLGTDADAIDRAEDRERFGDLLERLELQAPRWGVARSLDEARAVAEDIG 704

Query: 807  YPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALAD 866
            YP++VRPSYVLGG+AME +Y    L  Y           P+LID++LSDAIE+D+D +AD
Sbjct: 705  YPIMVRPSYVLGGQAMECIYEQRELERYFGQVTLGTIGLPLLIDEFLSDAIELDIDVVAD 764

Query: 867  SCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNC 926
            + GNVV+GG+MEHIE+AG+HSGDSAC +P  ++    +  +      LA  L V GLMN 
Sbjct: 765  AEGNVVVGGVMEHIEEAGIHSGDSACALPPYSLPDDIVAEVERQARALATELGVVGLMNA 824

Query: 927  QYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPKH 986
            Q+A+   G VY++E NPRASRTVPFVSKA G PLAK AA VM G++L +LG  ++VIP H
Sbjct: 825  QFAV-HRGAVYVIEVNPRASRTVPFVSKATGLPLAKIAARVMLGRTLPELG-VRQVIPAH 882

Query: 987  VSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVFL 1046
             SVKE+V PF +F   D LLGPEMRSTGEVMGID  F  A+ KAQIAAG  LP SGTVFL
Sbjct: 883  TSVKESVFPFGRFDNVDTLLGPEMRSTGEVMGIDQGFARAYGKAQIAAGNLLPESGTVFL 942

Query: 1047 SLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVAN 1106
            SL D  K     IA+    IGFK+ +T GTA +L   G+ VE + K+ EGRPH  D + N
Sbjct: 943  SLRDEDKAAGAGIARGLAAIGFKLAATHGTARYLIGMGLEVEGINKVLEGRPHCVDALKN 1002

Query: 1107 GQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITT 1143
            G   M+V T+ G +   +D   LRR  L   V   TT
Sbjct: 1003 GAYCMVVNTTDG-AQAAMDSHALRRAALTCNVSYFTT 1038


>gi|331681416|ref|ZP_08382053.1| carbamoyl-phosphate synthase, large subunit [Escherichia coli H299]
 gi|450184907|ref|ZP_21888817.1| carbamoyl phosphate synthase large subunit [Escherichia coli SEPT362]
 gi|331081637|gb|EGI52798.1| carbamoyl-phosphate synthase, large subunit [Escherichia coli H299]
 gi|449325637|gb|EMD15540.1| carbamoyl phosphate synthase large subunit [Escherichia coli SEPT362]
          Length = 1073

 Score = 1224 bits (3166), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 617/1071 (57%), Positives = 782/1071 (73%), Gaps = 19/1071 (1%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILILGAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  E+V +++EKERPDA+LPTMGGQTALN A+ L   G LE++GV +IGA  DA
Sbjct: 63   ATYIEPIHWEVVRKIIEKERPDAVLPTMGGQTALNCALELERQGVLEEFGVTMIGATADA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  F  AMK IG++T  SGI +T++E +++A ++G FP IIRP+FT+GG+GGGI
Sbjct: 123  IDKAEDRRRFDVAMKKIGLETARSGIAHTMEEALAVAADVG-FPCIIRPSFTMGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEFE IC  GL  S T ++L+++SL+GWKEYE+EV+RD  DN +I+CSIEN D MG
Sbjct: 182  AYNREEFEEICARGLDLSPTKELLIDESLIGWKEYEMEVVRDKNDNCIIVCSIENFDAMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            +HTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGVE GGSNVQFAVNP +G ++VIEMN
Sbjct: 242  IHTGDSITVAPAQTLTDKEYQIMRNASMAVLREIGVETGGSNVQFAVNPKNGRLIVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT  +TPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGYTLDELMNDITGGRTPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            F FEKF G+   LTTQMKSVGE MA+GRT QES QKALR LE G +G+      +     
Sbjct: 362  FNFEKFAGANDRLTTQMKSVGEVMAIGRTQQESLQKALRGLEVGATGFDPKVSLDDPEAL 421

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
             +++  L+    +R+  I  A + G+ VD +  L+ ID+WFL Q +EL+ +E+ +    +
Sbjct: 422  TKIRRELKDAGAERIWYIADAFRAGLSVDGVFNLTNIDRWFLVQIEELVRLEEKVAEVGI 481

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
            + +  +   ++KR+GF+D ++A      E E+R+ R    + P YKRVDTCAAEF  +T 
Sbjct: 482  TGLHAEFLRQLKRKGFADARLAKLAGVREAEIRKLRDQYDLHPVYKRVDTCAAEFATDTA 541

Query: 627  YMYSSYDFECESAP-TQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNS 685
            YMYS+Y+ ECE+ P T ++K+++LGGGPNRIGQGIEFDYCC H S +L+  GYETIM+N 
Sbjct: 542  YMYSTYEEECEANPSTDREKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVNC 601

Query: 686  NPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEH 745
            NPETVSTDYDTSDRLYFEP+T+EDVL ++ +E+P+G+IVQ+GGQTPLKL+          
Sbjct: 602  NPETVSTDYDTSDRLYFEPVTLEDVLEIVRIEKPKGVIVQYGGQTPLKLA---------- 651

Query: 746  RLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEI 805
            R   A+G   V + GTSPD+ID AEDRERF   ++ L ++QP      +   A+  AKEI
Sbjct: 652  RALEAAG---VPVIGTSPDAIDRAEDRERFQHAVERLKLKQPANATVTTIEMAVEKAKEI 708

Query: 806  GYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALA 865
            GYP+VVRPSYVLGGRAMEIVY +  L  Y + AV V  + PVL+D +L DA+E+DVDA+ 
Sbjct: 709  GYPLVVRPSYVLGGRAMEIVYDEADLRRYFQTAVSVSNDAPVLLDHFLDDAVEVDVDAIC 768

Query: 866  DSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMN 925
            D    V+IGGIMEHIEQAGVHSGDSAC +P  T+S    D +     KLA  L V GLMN
Sbjct: 769  DG-EMVLIGGIMEHIEQAGVHSGDSACSLPAYTLSQEIQDVMRQQVQKLAFELQVRGLMN 827

Query: 926  CQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPK 985
             Q+A+  + +VYL+E NPRA+RTVPFVSKA G PLAK AA VM+GKSL + G TKEVIP 
Sbjct: 828  VQFAVKNN-EVYLIEVNPRAARTVPFVSKATGVPLAKVAARVMAGKSLAEQGVTKEVIPP 886

Query: 986  HVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVF 1045
            + SVKE VLPF KF G D LLGPEMRSTGEVMG+  +F  AFAKAQ+ +   +   G   
Sbjct: 887  YYSVKEVVLPFNKFPGVDPLLGPEMRSTGEVMGVGRTFAEAFAKAQLGSNSTMKKHGRAL 946

Query: 1046 LSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVA 1105
            LS+ +  K  +  +A   L  GF++ +T GTA  L   GI    V K+HEGRPH  D + 
Sbjct: 947  LSVREGDKERVVDLAAKLLKQGFELDATHGTAIVLGEAGINPRLVNKVHEGRPHIQDRIK 1006

Query: 1106 NGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRS 1156
            NG+   ++ T+SG    + D   +RR  L YKV   TT++G  A A A+ +
Sbjct: 1007 NGEYTYIINTTSGRRAIE-DSRVIRRSALQYKVHYDTTLNGGFATAMALNA 1056


>gi|269960252|ref|ZP_06174627.1| carbamoyl-phosphate synthase large subunit [Vibrio harveyi 1DA3]
 gi|350530226|ref|ZP_08909167.1| carbamoyl phosphate synthase large subunit [Vibrio rotiferianus
            DAT722]
 gi|269835059|gb|EEZ89143.1| carbamoyl-phosphate synthase large subunit [Vibrio harveyi 1DA3]
          Length = 1077

 Score = 1224 bits (3166), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 615/1079 (56%), Positives = 782/1079 (72%), Gaps = 22/1079 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILILGAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIQSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPDMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  E+V  ++ KE+PDA+LPTMGGQTALN A+ L + G LE++GVE+IGA  DA
Sbjct: 63   ATYIEPIQWEVVRNIIAKEKPDAVLPTMGGQTALNCALDLEKHGVLEEFGVEMIGATADA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  F +AMK+IG++ P +    T++E  ++ + +G FP IIRP+FT+GGTGGGI
Sbjct: 123  IDKAEDRSRFDKAMKSIGLECPRADTAKTMEEAYAVLDMVG-FPCIIRPSFTMGGTGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYNKEEFE IC+ GL  S T+++L+++SL+GWKEYE+EV+RD ADN +I+C+IEN DPMG
Sbjct: 182  AYNKEEFEEICRRGLDLSPTNELLIDESLIGWKEYEMEVVRDKADNCIIVCAIENFDPMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            +HTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGVE GGSNVQF +NP DG +++IEMN
Sbjct: 242  IHTGDSITVAPAQTLTDKEYQLMRNASLAVLREIGVETGGSNVQFGINPKDGRMVIIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VG++LD++ NDIT   TPASFEP+IDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKIAAKLAVGFTLDELMNDITGGATPASFEPTIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWD- 505
            F FEKF G+   LTTQMKSVGE MA+GR  QES QKALR LE G +G+    + +LD   
Sbjct: 362  FNFEKFAGANDRLTTQMKSVGEVMAIGRNQQESLQKALRGLEVGATGF--DEMVDLDAPD 419

Query: 506  -WEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQ 564
               ++++ L+    +R+  I  A + GM VD +  L+ ID+WFL Q ++++ +EQ L  +
Sbjct: 420  ALTKIRHELKEAGAERIWYIADAFRAGMSVDGVFNLTQIDRWFLVQIEDIVKLEQELKAK 479

Query: 565  SVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEAN 624
              + + K++  ++KR+GF+D +++      E E+R  R    + P YKRVDTCAAEF ++
Sbjct: 480  GFAGLNKEELNKLKRKGFADARLSKILGVAESEIRRLRDQYDIHPVYKRVDTCAAEFSSD 539

Query: 625  TPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMN 684
            T YMYSSYD ECE+ PT K K++ILGGGPNRIGQGIEFDYCC H S +L+  GYETIM+N
Sbjct: 540  TAYMYSSYDDECEANPTDKDKIMILGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVN 599

Query: 685  SNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDE 744
             NPETVSTDYDTSDRLYFEP+T+EDVL +  +E+P+G+IVQ+GGQTPLKL+         
Sbjct: 600  CNPETVSTDYDTSDRLYFEPVTLEDVLAIARVEKPKGVIVQYGGQTPLKLA--------- 650

Query: 745  HRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKE 804
             R   A+G   V I GTSPD+ID AEDRERF   +  L + QP+     +   A+  ++E
Sbjct: 651  -RALEAAG---VPIIGTSPDAIDRAEDRERFQVAVDRLGLLQPENATVTTMEQAVEKSRE 706

Query: 805  IGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDAL 864
            IGYP+VVRPSYVLGGRAMEIVY ++ L  Y   AV V  E PVL+D +L DA+E+D+DA+
Sbjct: 707  IGYPLVVRPSYVLGGRAMEIVYDEQDLRRYFNEAVSVSNESPVLLDSFLDDAVEVDIDAI 766

Query: 865  ADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLM 924
             D    VVIGGIMEHIEQAGVHSGDSAC +P  T+S    D +     KLA  L V GLM
Sbjct: 767  CDG-ERVVIGGIMEHIEQAGVHSGDSACSLPAYTLSQEIQDVMREQVEKLAFELGVRGLM 825

Query: 925  NCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIP 984
            N Q+A+  +  VYL+E NPRA+RTVPFVSKA G P+AK AA VM+G+SL   GFTKE+IP
Sbjct: 826  NTQFAVKNN-QVYLIEVNPRAARTVPFVSKATGAPIAKIAARVMAGQSLEAQGFTKEIIP 884

Query: 985  KHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTV 1044
             + SVKE VLPF KF G D LLGPEMRSTGEVMG+  +F  A+AKA++  G   P  G  
Sbjct: 885  PYYSVKEVVLPFNKFPGVDPLLGPEMRSTGEVMGVGATFAEAYAKAELGCGNIYPEGGRA 944

Query: 1045 FLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMV 1104
             LS+    K  +  +A     +G+++ +T GTA  L   GI    V K+HEGRPH  D +
Sbjct: 945  LLSVRAGDKERVVDLASKLTKLGYQLDATHGTAVILGEAGINPRLVNKVHEGRPHILDRI 1004

Query: 1105 ANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTVT 1163
             N +   +V T++G    + D   LRR  LA KV   TT++ A A   A  +   +TVT
Sbjct: 1005 KNNEYTYIVNTAAGRQAIE-DSKVLRRGALAEKVNYTTTLNAAFATCMAHTADAKSTVT 1062



 Score =  250 bits (638), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 170/483 (35%), Positives = 263/483 (54%), Gaps = 37/483 (7%)

Query: 67  KIDS-SAELSNGAA----SSKDQKLGKRTDLRKILILGAGPIVIGQACEFDYSGTQACKA 121
           ++D+ +AE S+  A    S  D+     TD  KI+ILG GP  IGQ  EFDY    A  A
Sbjct: 528 RVDTCAAEFSSDTAYMYSSYDDECEANPTDKDKIMILGGGPNRIGQGIEFDYCCVHASLA 587

Query: 122 LKEEGYEVILINSNPATIMTDPGLADRTYITPMTPELVEQVLEKERPDALLPTMGGQTAL 181
           L+E+GYE I++N NP T+ TD   +DR Y  P+T E V  +   E+P  ++   GGQT L
Sbjct: 588 LREDGYETIMVNCNPETVSTDYDTSDRLYFEPVTLEDVLAIARVEKPKGVIVQYGGQTPL 647

Query: 182 NLAVALAESGALEKYGVELIGAKLDAIKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECI 241
            LA       ALE  GV +IG   DAI +AEDR+ F+ A+  +G+  P +    T+++ +
Sbjct: 648 KLA------RALEAAGVPIIGTSPDAIDRAEDRERFQVAVDRLGLLQPENATVTTMEQAV 701

Query: 242 SIANEIGEFPLIIRPAFTLGGTGGGIAYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKE 301
             + EIG +PL++RP++ LGG    I Y++++        ++ S  S VL++  L    E
Sbjct: 702 EKSREIG-YPLVVRPSYVLGGRAMEIVYDEQDLRRYFNEAVSVSNESPVLLDSFLDDAVE 760

Query: 302 YELEVMRDLADNVVIICSIENVDPMGVHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREI 361
            +++ + D  + VVI   +E+++  GVH+GDS    PA TL+ +    +R+    +  E+
Sbjct: 761 VDIDAICD-GERVVIGGIMEHIEQAGVHSGDSACSLPAYTLSQEIQDVMREQVEKLAFEL 819

Query: 362 GVECGGSNVQFAVNPVDGEVMVIEMNPRVSRSSALASKATGFPIAKMAAKLSVGYSLDQI 421
           GV  G  N QFAV   + +V +IE+NPR +R+    SKATG PIAK+AA++  G SL+  
Sbjct: 820 GVR-GLMNTQFAVK--NNQVYLIEVNPRAARTVPFVSKATGAPIAKIAARVMAGQSLE-- 874

Query: 422 PNDITKKTPASFEPSIDYVVTKIPRFAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQ 481
               TK+    +     Y V ++    F KFPG +PLL  +M+S GE M +G TF E++ 
Sbjct: 875 AQGFTKEIIPPY-----YSVKEVV-LPFNKFPGVDPLLGPEMRSTGEVMGVGATFAEAYA 928

Query: 482 KALRSLECGFSGWGCSNVKELDWDWEQLKYSLRVPNPDRMQAIYAAMKK-GMKVDEIHEL 540
           KA           GC N+     +  +   S+R  + +R+  + + + K G ++D  H  
Sbjct: 929 KA---------ELGCGNIYP---EGGRALLSVRAGDKERVVDLASKLTKLGYQLDATHGT 976

Query: 541 SFI 543
           + I
Sbjct: 977 AVI 979


>gi|26245956|ref|NP_751995.1| carbamoyl phosphate synthase large subunit [Escherichia coli CFT073]
 gi|222154860|ref|YP_002554999.1| Carbamoyl-phosphate synthase large chain [Escherichia coli LF82]
 gi|227885069|ref|ZP_04002874.1| carbamoyl phosphate synthase large subunit [Escherichia coli 83972]
 gi|300981005|ref|ZP_07175282.1| carbamoyl-phosphate synthase, large subunit [Escherichia coli MS
            45-1]
 gi|301048415|ref|ZP_07195442.1| carbamoyl-phosphate synthase, large subunit [Escherichia coli MS
            185-1]
 gi|386627536|ref|YP_006147256.1| carbamoyl phosphate synthase large subunit [Escherichia coli str.
            'clone D i2']
 gi|386632456|ref|YP_006152175.1| carbamoyl phosphate synthase large subunit [Escherichia coli str.
            'clone D i14']
 gi|386637385|ref|YP_006104183.1| carbamoyl phosphate synthase, large subunit [Escherichia coli ABU
            83972]
 gi|387615378|ref|YP_006118400.1| carbamoyl phosphate synthase large subunit [Escherichia coli O83:H1
            str. NRG 857C]
 gi|432410032|ref|ZP_19652720.1| carbamoyl-phosphate synthase large chain [Escherichia coli KTE39]
 gi|432434577|ref|ZP_19676989.1| carbamoyl-phosphate synthase large chain [Escherichia coli KTE188]
 gi|432454806|ref|ZP_19697018.1| carbamoyl-phosphate synthase large chain [Escherichia coli KTE201]
 gi|432493857|ref|ZP_19735679.1| carbamoyl-phosphate synthase large chain [Escherichia coli KTE214]
 gi|432510261|ref|ZP_19749121.1| carbamoyl-phosphate synthase large chain [Escherichia coli KTE220]
 gi|432522170|ref|ZP_19759316.1| carbamoyl-phosphate synthase large chain [Escherichia coli KTE230]
 gi|432566902|ref|ZP_19803434.1| carbamoyl-phosphate synthase large chain [Escherichia coli KTE53]
 gi|432591031|ref|ZP_19827365.1| carbamoyl-phosphate synthase large chain [Escherichia coli KTE60]
 gi|432605895|ref|ZP_19842095.1| carbamoyl-phosphate synthase large chain [Escherichia coli KTE67]
 gi|432649398|ref|ZP_19885168.1| carbamoyl-phosphate synthase large chain [Escherichia coli KTE87]
 gi|432781916|ref|ZP_20016103.1| carbamoyl-phosphate synthase large chain [Escherichia coli KTE63]
 gi|432976734|ref|ZP_20165561.1| carbamoyl-phosphate synthase large chain [Escherichia coli KTE209]
 gi|432993784|ref|ZP_20182406.1| carbamoyl-phosphate synthase large chain [Escherichia coli KTE218]
 gi|432998201|ref|ZP_20186753.1| carbamoyl-phosphate synthase large chain [Escherichia coli KTE223]
 gi|433056354|ref|ZP_20243456.1| carbamoyl-phosphate synthase large chain [Escherichia coli KTE124]
 gi|433085678|ref|ZP_20272090.1| carbamoyl-phosphate synthase large chain [Escherichia coli KTE137]
 gi|433113963|ref|ZP_20299789.1| carbamoyl-phosphate synthase large chain [Escherichia coli KTE153]
 gi|433123627|ref|ZP_20309227.1| carbamoyl-phosphate synthase large chain [Escherichia coli KTE160]
 gi|433142242|ref|ZP_20327460.1| carbamoyl-phosphate synthase large chain [Escherichia coli KTE167]
 gi|433147445|ref|ZP_20332534.1| carbamoyl-phosphate synthase large chain [Escherichia coli KTE174]
 gi|433196598|ref|ZP_20380539.1| carbamoyl-phosphate synthase large chain [Escherichia coli KTE94]
 gi|433210949|ref|ZP_20394574.1| carbamoyl-phosphate synthase large chain [Escherichia coli KTE99]
 gi|442607019|ref|ZP_21021812.1| Carbamoyl-phosphate synthase large chain [Escherichia coli Nissle
            1917]
 gi|33301028|sp|Q8FLB0.3|CARB_ECOL6 RecName: Full=Carbamoyl-phosphate synthase large chain; AltName:
            Full=Carbamoyl-phosphate synthetase ammonia chain
 gi|26106353|gb|AAN78539.1|AE016755_39 Carbamoyl-phosphate synthase large chain [Escherichia coli CFT073]
 gi|222031865|emb|CAP74603.1| Carbamoyl-phosphate synthase large chain [Escherichia coli LF82]
 gi|227837898|gb|EEJ48364.1| carbamoyl phosphate synthase large subunit [Escherichia coli 83972]
 gi|300299708|gb|EFJ56093.1| carbamoyl-phosphate synthase, large subunit [Escherichia coli MS
            185-1]
 gi|300409041|gb|EFJ92579.1| carbamoyl-phosphate synthase, large subunit [Escherichia coli MS
            45-1]
 gi|307551877|gb|ADN44652.1| carbamoyl phosphate synthase, large subunit [Escherichia coli ABU
            83972]
 gi|312944639|gb|ADR25466.1| carbamoyl phosphate synthase large subunit [Escherichia coli O83:H1
            str. NRG 857C]
 gi|355418435|gb|AER82632.1| carbamoyl phosphate synthase large subunit [Escherichia coli str.
            'clone D i2']
 gi|355423355|gb|AER87551.1| carbamoyl phosphate synthase large subunit [Escherichia coli str.
            'clone D i14']
 gi|430939524|gb|ELC59740.1| carbamoyl-phosphate synthase large chain [Escherichia coli KTE39]
 gi|430968311|gb|ELC85538.1| carbamoyl-phosphate synthase large chain [Escherichia coli KTE188]
 gi|430986739|gb|ELD03305.1| carbamoyl-phosphate synthase large chain [Escherichia coli KTE201]
 gi|431029631|gb|ELD42662.1| carbamoyl-phosphate synthase large chain [Escherichia coli KTE214]
 gi|431032404|gb|ELD45114.1| carbamoyl-phosphate synthase large chain [Escherichia coli KTE220]
 gi|431055960|gb|ELD65490.1| carbamoyl-phosphate synthase large chain [Escherichia coli KTE230]
 gi|431103481|gb|ELE08124.1| carbamoyl-phosphate synthase large chain [Escherichia coli KTE53]
 gi|431134213|gb|ELE36177.1| carbamoyl-phosphate synthase large chain [Escherichia coli KTE60]
 gi|431142163|gb|ELE43913.1| carbamoyl-phosphate synthase large chain [Escherichia coli KTE67]
 gi|431194684|gb|ELE93899.1| carbamoyl-phosphate synthase large chain [Escherichia coli KTE87]
 gi|431332809|gb|ELG20030.1| carbamoyl-phosphate synthase large chain [Escherichia coli KTE63]
 gi|431483692|gb|ELH63381.1| carbamoyl-phosphate synthase large chain [Escherichia coli KTE209]
 gi|431511767|gb|ELH89897.1| carbamoyl-phosphate synthase large chain [Escherichia coli KTE218]
 gi|431516630|gb|ELH94235.1| carbamoyl-phosphate synthase large chain [Escherichia coli KTE223]
 gi|431575650|gb|ELI48381.1| carbamoyl-phosphate synthase large chain [Escherichia coli KTE124]
 gi|431611306|gb|ELI80585.1| carbamoyl-phosphate synthase large chain [Escherichia coli KTE137]
 gi|431637906|gb|ELJ05956.1| carbamoyl-phosphate synthase large chain [Escherichia coli KTE153]
 gi|431651202|gb|ELJ18468.1| carbamoyl-phosphate synthase large chain [Escherichia coli KTE160]
 gi|431653336|gb|ELJ20447.1| carbamoyl-phosphate synthase large chain [Escherichia coli KTE167]
 gi|431679941|gb|ELJ45820.1| carbamoyl-phosphate synthase large chain [Escherichia coli KTE174]
 gi|431727163|gb|ELJ90926.1| carbamoyl-phosphate synthase large chain [Escherichia coli KTE94]
 gi|431736657|gb|ELJ99981.1| carbamoyl-phosphate synthase large chain [Escherichia coli KTE99]
 gi|441711768|emb|CCQ07789.1| Carbamoyl-phosphate synthase large chain [Escherichia coli Nissle
            1917]
          Length = 1073

 Score = 1224 bits (3166), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 619/1072 (57%), Positives = 783/1072 (73%), Gaps = 21/1072 (1%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILILGAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  E+V +++EKERPDA+LPTMGGQTALN A+ L   G LE++GV +IGA  DA
Sbjct: 63   ATYIEPIHWEVVRKIIEKERPDAVLPTMGGQTALNCALELERQGVLEEFGVTMIGATADA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  F  AMK IG++T  SGI ++++E +++A E+G FP IIRP+FT+GG+GGGI
Sbjct: 123  IDKAEDRRRFDVAMKKIGLETARSGIAHSMEEALAVAAEVG-FPCIIRPSFTMGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEFE IC  GL  S T ++L+++SL+GWKEYE+EV+RD  DN +I+CSIEN D MG
Sbjct: 182  AYNREEFEEICARGLDLSPTKELLIDESLIGWKEYEMEVVRDKNDNCIIVCSIENFDAMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            +HTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGVE GGSNVQFAVNP +G ++VIEMN
Sbjct: 242  IHTGDSITVAPAQTLTDKEYQIMRNASMAVLREIGVETGGSNVQFAVNPKNGRLIVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT  +TPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGYTLDELMNDITGGRTPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            F FEKF G+   LTTQMKSVGE MA+GRT QES QKALR LE G +G+      +     
Sbjct: 362  FNFEKFAGANDRLTTQMKSVGEVMAIGRTQQESLQKALRGLEVGATGFDPKVSLDDPEAL 421

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
             +++  L+    +R+  I  A + G+ VD +  L+ ID+WFL Q +EL+ +E+ +    +
Sbjct: 422  TKIRRELKDAGAERIWYIADAFRAGLSVDGVFNLTNIDRWFLVQIEELVRLEEKVAEVGI 481

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
            + +  +   ++KR+GF+D ++A      E E+R+ R    + P YKRVDTCAAEF  +T 
Sbjct: 482  TGLHAEFLRQLKRKGFADARLAKLAGVREAEIRKLRDQYDLHPVYKRVDTCAAEFATDTA 541

Query: 627  YMYSSYDFECESAP-TQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNS 685
            YMYS+Y+ ECE+ P T ++K+++LGGGPNRIGQGIEFDYCC H S +L+  GYETIM+N 
Sbjct: 542  YMYSTYEEECEANPSTDREKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVNC 601

Query: 686  NPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEH 745
            NPETVSTDYDTSDRLYFEP+T+EDVL ++ +E+P+G+IVQ+GGQTPLKL+          
Sbjct: 602  NPETVSTDYDTSDRLYFEPVTLEDVLEIVRIEKPKGVIVQYGGQTPLKLA---------- 651

Query: 746  RLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEI 805
            R   A+G   V + GTSPD+ID AEDRERF   ++ L ++QP      +   A+  AKEI
Sbjct: 652  RALEAAG---VPVIGTSPDAIDRAEDRERFQHAVERLKLKQPANATVTTIEMAVEKAKEI 708

Query: 806  GYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALA 865
            GYP+VVRPSYVLGGRAMEIVY +  L  Y + AV V  + PVL+D +L DA+E+DVDA+ 
Sbjct: 709  GYPLVVRPSYVLGGRAMEIVYDEADLRRYFQTAVSVSNDAPVLLDHFLDDAVEVDVDAIC 768

Query: 866  DSCGNVV-IGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLM 924
            D  G VV IGGIMEHIEQAGVHSGDSAC +P  T+S    D +     KLA  L V GLM
Sbjct: 769  D--GEVVLIGGIMEHIEQAGVHSGDSACSLPAYTLSQEIQDVMRQQVQKLAFELQVRGLM 826

Query: 925  NCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIP 984
            N Q+A+  + +VYL+E NPRA+RTVPFVSKA G PLAK AA VM+GKSL + G TKEVIP
Sbjct: 827  NVQFAVKNN-EVYLIEVNPRAARTVPFVSKATGVPLAKVAARVMAGKSLAEQGVTKEVIP 885

Query: 985  KHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTV 1044
             + SVKE VLPF KF G D LLGPEMRSTGEVMG+  +F  AFAKAQ+ +   +   G  
Sbjct: 886  PYYSVKEVVLPFNKFPGVDPLLGPEMRSTGEVMGVGRTFAEAFAKAQLGSNSTMKKHGRA 945

Query: 1045 FLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMV 1104
             LS+ +  K  +  +A   L  GF++ +T GTA  L   GI    V K+HEGRPH  D +
Sbjct: 946  LLSVREGDKERVVDLAAKLLKQGFELDATHGTAIVLGEAGINPRLVNKVHEGRPHIQDRI 1005

Query: 1105 ANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRS 1156
             NG+   ++ T+SG    + D   +RR  L YKV   TT++G  A A A+ +
Sbjct: 1006 KNGEYTYIINTTSGRRAIE-DSRVIRRSALQYKVHYDTTLNGGFATAMALNA 1056


>gi|308185623|ref|YP_003929754.1| carbamoyl-phosphate synthase large subunit [Pantoea vagans C9-1]
 gi|308056133|gb|ADO08305.1| carbamoyl-phosphate synthase large chain [Pantoea vagans C9-1]
          Length = 1075

 Score = 1224 bits (3166), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 615/1071 (57%), Positives = 783/1071 (73%), Gaps = 19/1071 (1%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTDL+ ILILGAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDLKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  E+V +++EKERPDA+LPTMGGQTALN A+ L   G LE++GV +IGA  DA
Sbjct: 63   ATYIEPIHWEVVRKIIEKERPDAVLPTMGGQTALNCALELERHGVLEEFGVTMIGATADA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  F  AMK+IG+ T  SGI +T++E +++A ++G FP IIRP+FT+GGTGGGI
Sbjct: 123  IDKAEDRRRFDVAMKSIGLDTARSGIAHTMEEALAVAEDVG-FPCIIRPSFTMGGTGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEFE IC+ GL  S T+++L+++SL+GWKEYE+EV+RD  DN +I+CSIEN D MG
Sbjct: 182  AYNREEFEEICERGLDLSPTNELLIDESLIGWKEYEMEVVRDKNDNCIIVCSIENFDAMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            +HTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGVE GGSNVQF+VNP DG ++VIEMN
Sbjct: 242  IHTGDSITVAPAQTLTDKEYQIMRNASLAVLREIGVETGGSNVQFSVNPKDGRLIVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKK-TPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT   TPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGYTLDELMNDITGGLTPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            F FEKF G+   LTTQMKSVGE MA+GRTFQES QKALR LE G +G+      +     
Sbjct: 362  FNFEKFAGANDRLTTQMKSVGEVMAIGRTFQESMQKALRGLEVGANGFDPKVHLDDPEAL 421

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
             +++  L+    DR+  I  A + GM VD +  L+ ID+WFL Q +EL+ +E  + ++ V
Sbjct: 422  TRIRRELKDAGSDRIWYIADAFRAGMSVDGVFNLTNIDRWFLVQIEELVRLEDQVASEGV 481

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
            +++       +KR+GF+D ++A      E E+R+ R    + P YKRVDTCAAEF  +T 
Sbjct: 482  NSLDATFLRTLKRKGFADARLATLAGVAESEIRKLRQQFNLHPVYKRVDTCAAEFATDTA 541

Query: 627  YMYSSYDFECESAPT-QKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNS 685
            YMYS+Y+ ECE+ P+  ++K++ILGGGPNRIGQGIEFDYCC H + +L+  GY+TIM+N 
Sbjct: 542  YMYSTYEEECEANPSPDREKIMILGGGPNRIGQGIEFDYCCVHAALALREDGYQTIMVNC 601

Query: 686  NPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEH 745
            NPETVSTDYDTSDRLYFEP+T+EDVL ++ +E+P+G+IVQ+GGQTPLKL+          
Sbjct: 602  NPETVSTDYDTSDRLYFEPVTLEDVLEIVRIEQPKGVIVQYGGQTPLKLA---------- 651

Query: 746  RLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEI 805
            R   A+G   V + GTSPDSID AEDRERF   +  L ++QP      +   A+  A  +
Sbjct: 652  RALEAAG---VPVIGTSPDSIDRAEDRERFQQAVDRLKLKQPANATVATLEQAVEKAAGL 708

Query: 806  GYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALA 865
            GYP+VVRPSYVLGGRAMEIVY +  L  Y + AV V  + PVL+D++L DA+E+DVDA+ 
Sbjct: 709  GYPLVVRPSYVLGGRAMEIVYDEIDLRRYFQTAVSVSNDAPVLLDRFLDDAVEVDVDAIC 768

Query: 866  DSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMN 925
            D    V+IGGIMEHIEQAGVHSGDSAC +P  T++    + +     KLA  LNV GLMN
Sbjct: 769  DG-ERVLIGGIMEHIEQAGVHSGDSACSLPAYTLNQEIQNVMRQQVEKLAFELNVRGLMN 827

Query: 926  CQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPK 985
             Q+A+  + +VYL+E NPRA+RTVPFVSKA G PLAK AA VM+GK+L + G T+EVIP 
Sbjct: 828  VQFAVKDN-EVYLIEVNPRAARTVPFVSKATGVPLAKVAARVMAGKTLAEQGVTEEVIPP 886

Query: 986  HVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVF 1045
            + SVKE VLPF KFQG D +LGPEMRSTGEVMG+  +F  AF+KA + A   +  SG   
Sbjct: 887  YYSVKEVVLPFNKFQGVDPILGPEMRSTGEVMGVGRTFAEAFSKAMLGAQSNMKKSGRAL 946

Query: 1046 LSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVA 1105
            LS+ +  K  +  +A      GF++ +T GTA  L   GI    V K+HEGRPH  D + 
Sbjct: 947  LSVREGDKKRIVDLAAKLQKFGFELDATHGTAVVLGEAGINPRLVNKVHEGRPHIQDRLK 1006

Query: 1106 NGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRS 1156
            NG+   +V T++G    + D   +RR  L YKV   TT++G  A A A+ +
Sbjct: 1007 NGEYSYIVNTTAGRQAIE-DSKLIRRSALQYKVHYDTTLNGGFATAMALNA 1056


>gi|423685186|ref|ZP_17659994.1| carbamoyl phosphate synthase large subunit [Vibrio fischeri SR5]
 gi|371495687|gb|EHN71282.1| carbamoyl phosphate synthase large subunit [Vibrio fischeri SR5]
          Length = 1076

 Score = 1224 bits (3166), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 616/1079 (57%), Positives = 781/1079 (72%), Gaps = 22/1079 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ +LILGAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIKSVLILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPDMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  E+V  ++EKERPDA+LPTMGGQTALN A+ L + G L ++GVE+IGA  DA
Sbjct: 63   ATYIEPIHWEVVRNIIEKERPDAVLPTMGGQTALNCALDLEKHGVLAEFGVEMIGATADA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  F +AMK+IG++ P +    T+DE   + + +G FP IIRP+FT+GGTGGGI
Sbjct: 123  IDKAEDRSRFDKAMKSIGLECPRADTAKTMDEAYQVLDMVG-FPCIIRPSFTMGGTGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYNKEEFE IC+ GL  S T+++L+++SL+GWKEYE+EV+RD  DN +I+C+IEN D MG
Sbjct: 182  AYNKEEFEEICRRGLDLSPTNELLIDESLIGWKEYEMEVVRDKNDNCIIVCAIENFDAMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            +HTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGVE GGSNVQF +NP DG +++IEMN
Sbjct: 242  IHTGDSITVAPAQTLTDKEYQLMRNASLAVLREIGVETGGSNVQFGINPKDGRMVIIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL++G++LD++ NDIT   TPASFEP+IDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKIAAKLAIGFTLDELMNDITGGATPASFEPTIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWD- 505
            F FEKF G+   LTTQMKSVGE MA+GR  QES QKALR LE G +G+    + +LD   
Sbjct: 362  FNFEKFAGANDRLTTQMKSVGEVMAIGRNQQESLQKALRGLEVGATGF--DEMVDLDAPD 419

Query: 506  -WEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQ 564
               ++++ L+    +R+  I  A + GM VD +  L+ +D+WFL Q ++L+  E+ +   
Sbjct: 420  ALTKIRHELKDAGAERIWYIADAFRAGMSVDGVFNLTNVDRWFLVQIEDLVKEEEAVKAG 479

Query: 565  SVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEAN 624
              +N+T D   ++KR+GF+D +++      E E+R  R    + P YKRVDTCAAEF ++
Sbjct: 480  GFANLTADALRKLKRKGFADARLSKLLGVGESEIRRLRDQHDIHPVYKRVDTCAAEFSSD 539

Query: 625  TPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMN 684
            T YMYSSYD ECE+ PT K K++ILGGGPNRIGQGIEFDYCC H S +L+  GYETIM+N
Sbjct: 540  TAYMYSSYDEECEANPTDKDKIMILGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVN 599

Query: 685  SNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDE 744
             NPETVSTDYDTSDRLYFEP+T+EDVL +  +E+P+G+IVQ+GGQTPLKL+         
Sbjct: 600  CNPETVSTDYDTSDRLYFEPVTLEDVLAIARVEKPKGVIVQYGGQTPLKLA--------- 650

Query: 745  HRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKE 804
             R   A+G   V I GTSPD+ID AEDRERF   +  L + QP+     +   A+  +KE
Sbjct: 651  -RALEAAG---VPIIGTSPDAIDRAEDRERFQVAVDRLELLQPENATVTTMEQAIDKSKE 706

Query: 805  IGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDAL 864
            IG+P+VVRPSYVLGGRAMEIVY ++ L  Y   AV V  E PVL+D +L DA+E+DVDA+
Sbjct: 707  IGFPLVVRPSYVLGGRAMEIVYDEQDLRRYFNEAVSVSNESPVLLDSFLDDAVEVDVDAI 766

Query: 865  ADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLM 924
             D    VVIGGIMEHIEQAGVHSGDSAC +P  T+S    D +     KLA  L V GLM
Sbjct: 767  CDG-EQVVIGGIMEHIEQAGVHSGDSACSLPAYTLSEEIQDVMRDQVRKLAFELGVRGLM 825

Query: 925  NCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIP 984
            N Q+A+  +  VYL+E NPRA+RTVPFVSKA G PLAK AA VM+G+SL   GFTKE+IP
Sbjct: 826  NTQFAVKDN-KVYLIEVNPRAARTVPFVSKATGAPLAKIAARVMAGQSLESQGFTKEIIP 884

Query: 985  KHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTV 1044
             + SVKE VLPF KF G D LLGPEMRSTGEVMG+  +F  AFAKA++   ++ P  G  
Sbjct: 885  PYYSVKEVVLPFNKFPGVDPLLGPEMRSTGEVMGVGATFAEAFAKAELGCSKEYPEGGRA 944

Query: 1045 FLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMV 1104
             LS+ +  K  +  +AK  + +G+++ +T GTA  L   GI    V K+HEGRPH  D +
Sbjct: 945  LLSVREGDKKRVVDLAKHLVKLGYQLDATHGTAVILGEAGINPRLVNKVHEGRPHILDRI 1004

Query: 1105 ANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTVT 1163
             NG+   +V T++G    + D   LRR  LA KV   TT++ A A+  A  +    TV 
Sbjct: 1005 KNGEYTYIVNTAAGRQAIE-DSKVLRRGALAEKVNYTTTLNAAFASCLAHEADDRKTVN 1062



 Score =  251 bits (642), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 163/422 (38%), Positives = 241/422 (57%), Gaps = 24/422 (5%)

Query: 67  KIDS-SAELSNGAA---SSKDQKL-GKRTDLRKILILGAGPIVIGQACEFDYSGTQACKA 121
           ++D+ +AE S+  A   SS D++     TD  KI+ILG GP  IGQ  EFDY    A  A
Sbjct: 528 RVDTCAAEFSSDTAYMYSSYDEECEANPTDKDKIMILGGGPNRIGQGIEFDYCCVHASLA 587

Query: 122 LKEEGYEVILINSNPATIMTDPGLADRTYITPMTPELVEQVLEKERPDALLPTMGGQTAL 181
           L+E+GYE I++N NP T+ TD   +DR Y  P+T E V  +   E+P  ++   GGQT L
Sbjct: 588 LREDGYETIMVNCNPETVSTDYDTSDRLYFEPVTLEDVLAIARVEKPKGVIVQYGGQTPL 647

Query: 182 NLAVALAESGALEKYGVELIGAKLDAIKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECI 241
            LA       ALE  GV +IG   DAI +AEDR+ F+ A+  + +  P +    T+++ I
Sbjct: 648 KLA------RALEAAGVPIIGTSPDAIDRAEDRERFQVAVDRLELLQPENATVTTMEQAI 701

Query: 242 SIANEIGEFPLIIRPAFTLGGTGGGIAYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKE 301
             + EIG FPL++RP++ LGG    I Y++++        ++ S  S VL++  L    E
Sbjct: 702 DKSKEIG-FPLVVRPSYVLGGRAMEIVYDEQDLRRYFNEAVSVSNESPVLLDSFLDDAVE 760

Query: 302 YELEVMRDLADNVVIICSIENVDPMGVHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREI 361
            +++ + D  + VVI   +E+++  GVH+GDS    PA TL+++    +RD    +  E+
Sbjct: 761 VDVDAICD-GEQVVIGGIMEHIEQAGVHSGDSACSLPAYTLSEEIQDVMRDQVRKLAFEL 819

Query: 362 GVECGGSNVQFAVNPVDGEVMVIEMNPRVSRSSALASKATGFPIAKMAAKLSVGYSLDQI 421
           GV  G  N QFAV   D +V +IE+NPR +R+    SKATG P+AK+AA++  G SL+  
Sbjct: 820 GVR-GLMNTQFAVK--DNKVYLIEVNPRAARTVPFVSKATGAPLAKIAARVMAGQSLES- 875

Query: 422 PNDITKKTPASFEPSIDYVVTKIPRFAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQ 481
               TK+    +     Y V ++    F KFPG +PLL  +M+S GE M +G TF E+F 
Sbjct: 876 -QGFTKEIIPPY-----YSVKEVV-LPFNKFPGVDPLLGPEMRSTGEVMGVGATFAEAFA 928

Query: 482 KA 483
           KA
Sbjct: 929 KA 930


>gi|395229210|ref|ZP_10407526.1| carbamoyl-phosphate synthase large subunit [Citrobacter sp. A1]
 gi|424729309|ref|ZP_18157911.1| carbamoyl-phosphate synthase large subunit [Citrobacter sp. L17]
 gi|394717263|gb|EJF22961.1| carbamoyl-phosphate synthase large subunit [Citrobacter sp. A1]
 gi|422896033|gb|EKU35819.1| carbamoyl-phosphate synthase large subunit [Citrobacter sp. L17]
          Length = 1075

 Score = 1223 bits (3165), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 617/1078 (57%), Positives = 782/1078 (72%), Gaps = 19/1078 (1%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILILGAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  E+V +++EKERPDA+LPTMGGQTALN A+ L   G L ++GV +IGA  DA
Sbjct: 63   ATYIEPIHWEVVRKIIEKERPDAVLPTMGGQTALNCALELERQGVLAEFGVTMIGATADA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  F  AMK IG+ T  SGI +T++E +++A ++G FP IIRP+FT+GGTGGGI
Sbjct: 123  IDKAEDRRRFDIAMKKIGLDTARSGIAHTMEEALAVAADVG-FPCIIRPSFTMGGTGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEFE IC+ GL  S T+++L+++SL+GWKEYE+EV+RD  DN +I+CSIEN D MG
Sbjct: 182  AYNREEFEEICERGLDLSPTNELLIDESLIGWKEYEMEVVRDKNDNCIIVCSIENFDAMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            +HTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGVE GGSNVQFAVNP +G ++VIEMN
Sbjct: 242  IHTGDSITVAPAQTLTDKEYQIMRNASMAVLREIGVETGGSNVQFAVNPKNGRLIVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT  +TPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGYTLDELMNDITGGRTPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            F FEKF G+   LTTQMKSVGE MA+GRT QES QKALR LE G +G+      +     
Sbjct: 362  FNFEKFVGANDRLTTQMKSVGEVMAIGRTQQESLQKALRGLEVGATGFDPKVSLDDPEAL 421

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
             +++  L+    +R+  I  A + G+ VD +  L+ ID+WFL Q +EL+ +E+ ++   +
Sbjct: 422  TKIRRELKDAGAERIWYIADAFRAGLSVDGVFNLTNIDRWFLVQIEELVRLEEKVIDLGI 481

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
            + +  D    +KR+GF+D ++A      E E+R+ R    + P YKRVDTCAAEF  +T 
Sbjct: 482  NGLDADFLRVLKRKGFADARLAKLAGVREAEIRKLRDQYNLHPVYKRVDTCAAEFATDTA 541

Query: 627  YMYSSYDFECESAPT-QKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNS 685
            YMYS+Y+ ECE+ P+  + K+++LGGGPNRIGQGIEFDYCC H S +L+  GYETIM+N 
Sbjct: 542  YMYSTYEDECEANPSVDRDKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVNC 601

Query: 686  NPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEH 745
            NPETVSTDYDTSDRLYFEP+T+EDVL ++ +E+P+G+IVQ+GGQTPLKL+          
Sbjct: 602  NPETVSTDYDTSDRLYFEPVTLEDVLEIVRIEKPKGVIVQYGGQTPLKLA---------- 651

Query: 746  RLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEI 805
            R   A+G   V + GTSPD+ID AEDRERF   +  L ++QP      +   A+  AKEI
Sbjct: 652  RALEAAG---VPVIGTSPDAIDRAEDRERFQQAVDRLKLKQPANATVTAIEQAVEKAKEI 708

Query: 806  GYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALA 865
            GYP+VVRPSYVLGGRAMEIVY +  L  Y + AV V  + PVL+D++L DA+E+DVDA+ 
Sbjct: 709  GYPLVVRPSYVLGGRAMEIVYDEADLRRYFQTAVSVSNDAPVLLDRFLDDAVEVDVDAIC 768

Query: 866  DSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMN 925
            D    V+IGGIMEHIEQAGVHSGDSAC +P  T+S    D +     KLA  L V GLMN
Sbjct: 769  DG-EMVLIGGIMEHIEQAGVHSGDSACSLPAYTLSQEIQDVMRQQVQKLAFELQVRGLMN 827

Query: 926  CQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPK 985
             Q+A+  + +VYL+E NPRA+RTVPFVSKA G PLAK AA VM+GK+L   G TKEVIP 
Sbjct: 828  VQFAVKNN-EVYLIEVNPRAARTVPFVSKATGVPLAKVAARVMAGKTLAQQGVTKEVIPP 886

Query: 986  HVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVF 1045
            + SVKE VLPF KF G D LLGPEMRSTGEVMG+  +F  AFAKAQ+ +   +   G   
Sbjct: 887  YYSVKEVVLPFNKFPGVDPLLGPEMRSTGEVMGVGRTFAEAFAKAQLGSSSTMKKQGRAL 946

Query: 1046 LSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVA 1105
            LS+ +  K  +  +A   L  GF++ +T GTA  L   GI    V K+HEGRPH  D + 
Sbjct: 947  LSVREGDKERVVDLAAKLLKFGFELDATHGTAIVLGEAGINPRLVNKVHEGRPHIQDRIK 1006

Query: 1106 NGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTVT 1163
            NG+   ++ T+ G    + D   +RR  L YKV   TT++G  A A A+ +  +  VT
Sbjct: 1007 NGEYTYIINTTEGRQAIE-DSKLIRRSALQYKVHYDTTLNGGFATAMALNADATEKVT 1063


>gi|421844661|ref|ZP_16277818.1| carbamoyl phosphate synthase large subunit [Citrobacter freundii ATCC
            8090 = MTCC 1658]
 gi|411774140|gb|EKS57650.1| carbamoyl phosphate synthase large subunit [Citrobacter freundii ATCC
            8090 = MTCC 1658]
          Length = 1075

 Score = 1223 bits (3165), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 617/1078 (57%), Positives = 782/1078 (72%), Gaps = 19/1078 (1%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILILGAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  E+V +++EKERPDA+LPTMGGQTALN A+ L   G L ++GV +IGA  DA
Sbjct: 63   ATYIEPIHWEVVRKIIEKERPDAVLPTMGGQTALNCALELERQGVLAEFGVTMIGATADA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  F  AMK IG+ T  SGI +T++E +++A ++G FP IIRP+FT+GGTGGGI
Sbjct: 123  IDKAEDRRRFDIAMKKIGLDTARSGIAHTMEEALAVAADVG-FPCIIRPSFTMGGTGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEFE IC+ GL  S T+++L+++SL+GWKEYE+EV+RD  DN +I+CSIEN D MG
Sbjct: 182  AYNREEFEEICERGLDLSPTNELLIDESLIGWKEYEMEVVRDKNDNCIIVCSIENFDAMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            +HTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGVE GGSNVQFAVNP +G ++VIEMN
Sbjct: 242  IHTGDSITVAPAQTLTDKEYQIMRNASMAVLREIGVETGGSNVQFAVNPKNGRLIVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT  +TPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGYTLDELMNDITGGRTPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            F FEKF G+   LTTQMKSVGE MA+GRT QES QKALR LE G +G+      +     
Sbjct: 362  FNFEKFVGANDRLTTQMKSVGEVMAIGRTQQESLQKALRGLEVGATGFDPKVSLDDPEAL 421

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
             +++  L+    +R+  I  A + G+ VD +  L+ ID+WFL Q +EL+ +E+ ++   +
Sbjct: 422  TKIRRELKDAGAERIWYIADAFRGGLSVDGVFNLTNIDRWFLVQIEELVRLEEKVIDLGI 481

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
            + +  D    +KR+GF+D ++A      E E+R+ R    + P YKRVDTCAAEF  +T 
Sbjct: 482  NGLDADFLRVLKRKGFADARLAKLAGVREAEIRKLRDQYNLHPVYKRVDTCAAEFATDTA 541

Query: 627  YMYSSYDFECESAPT-QKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNS 685
            YMYS+Y+ ECE+ P+  + K+++LGGGPNRIGQGIEFDYCC H S +L+  GYETIM+N 
Sbjct: 542  YMYSTYEDECEANPSVDRDKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVNC 601

Query: 686  NPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEH 745
            NPETVSTDYDTSDRLYFEP+T+EDVL ++ +E+P+G+IVQ+GGQTPLKL+          
Sbjct: 602  NPETVSTDYDTSDRLYFEPVTLEDVLEIVRIEKPKGVIVQYGGQTPLKLA---------- 651

Query: 746  RLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEI 805
            R   A+G   V + GTSPD+ID AEDRERF   +  L ++QP      +   A+  AKEI
Sbjct: 652  RALEAAG---VPVIGTSPDAIDRAEDRERFQQAVDRLKLKQPANATVTAIEQAVEKAKEI 708

Query: 806  GYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALA 865
            GYP+VVRPSYVLGGRAMEIVY +  L  Y + AV V  + PVL+D++L DA+E+DVDA+ 
Sbjct: 709  GYPLVVRPSYVLGGRAMEIVYDEADLRRYFQTAVSVSNDAPVLLDRFLDDAVEVDVDAIC 768

Query: 866  DSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMN 925
            D    V+IGGIMEHIEQAGVHSGDSAC +P  T+S    D +     KLA  L V GLMN
Sbjct: 769  DG-EMVLIGGIMEHIEQAGVHSGDSACSLPAYTLSQEIQDVMRQQVQKLAFELQVRGLMN 827

Query: 926  CQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPK 985
             Q+A+  + +VYL+E NPRA+RTVPFVSKA G PLAK AA VM+GK+L   G TKEVIP 
Sbjct: 828  VQFAVKNN-EVYLIEVNPRAARTVPFVSKATGVPLAKVAARVMAGKTLAQQGVTKEVIPP 886

Query: 986  HVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVF 1045
            + SVKE VLPF KF G D LLGPEMRSTGEVMG+  +F  AFAKAQ+ +   +   G   
Sbjct: 887  YYSVKEVVLPFNKFPGVDPLLGPEMRSTGEVMGVGRTFAEAFAKAQLGSSSTMKKQGRAL 946

Query: 1046 LSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVA 1105
            LS+ +  K  +  +A   L  GF++ +T GTA  L   GI    V K+HEGRPH  D + 
Sbjct: 947  LSVREGDKERVVDLAAKLLKFGFELDATHGTAIVLGEAGINPRLVNKVHEGRPHIQDRIK 1006

Query: 1106 NGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTVT 1163
            NG+   ++ T+ G    + D   +RR  L YKV   TT++G  A A A+ +  +  VT
Sbjct: 1007 NGEYTYIINTTEGRQAIE-DSKLIRRSALQYKVHYDTTLNGGFATAMALNADATEKVT 1063


  Database: nr
    Posted date:  Mar 3, 2013 10:45 PM
  Number of letters in database: 999,999,864
  Number of sequences in database:  2,912,245
  
  Database: /local_scratch/syshi//blastdatabase/nr.01
    Posted date:  Mar 3, 2013 10:52 PM
  Number of letters in database: 999,999,666
  Number of sequences in database:  2,912,720
  
  Database: /local_scratch/syshi//blastdatabase/nr.02
    Posted date:  Mar 3, 2013 10:58 PM
  Number of letters in database: 999,999,938
  Number of sequences in database:  3,014,250
  
  Database: /local_scratch/syshi//blastdatabase/nr.03
    Posted date:  Mar 3, 2013 11:03 PM
  Number of letters in database: 999,999,780
  Number of sequences in database:  2,805,020
  
  Database: /local_scratch/syshi//blastdatabase/nr.04
    Posted date:  Mar 3, 2013 11:08 PM
  Number of letters in database: 999,999,551
  Number of sequences in database:  2,816,253
  
  Database: /local_scratch/syshi//blastdatabase/nr.05
    Posted date:  Mar 3, 2013 11:13 PM
  Number of letters in database: 999,999,897
  Number of sequences in database:  2,981,387
  
  Database: /local_scratch/syshi//blastdatabase/nr.06
    Posted date:  Mar 3, 2013 11:18 PM
  Number of letters in database: 999,999,649
  Number of sequences in database:  2,911,476
  
  Database: /local_scratch/syshi//blastdatabase/nr.07
    Posted date:  Mar 3, 2013 11:24 PM
  Number of letters in database: 999,999,452
  Number of sequences in database:  2,920,260
  
  Database: /local_scratch/syshi//blastdatabase/nr.08
    Posted date:  Mar 3, 2013 11:25 PM
  Number of letters in database: 64,230,274
  Number of sequences in database:  189,558
  
Lambda     K      H
   0.317    0.133    0.382 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 17,990,230,900
Number of Sequences: 23463169
Number of extensions: 765347952
Number of successful extensions: 2216707
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 13266
Number of HSP's successfully gapped in prelim test: 10905
Number of HSP's that attempted gapping in prelim test: 2044714
Number of HSP's gapped (non-prelim): 50002
length of query: 1190
length of database: 8,064,228,071
effective HSP length: 154
effective length of query: 1036
effective length of database: 8,745,867,341
effective search space: 9060718565276
effective search space used: 9060718565276
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 83 (36.6 bits)