Query 001017
Match_columns 1189
No_of_seqs 365 out of 3055
Neff 8.7
Searched_HMMs 29240
Date Mon Mar 25 06:41:17 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/001017.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/001017hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ixz_A Potassium-transporting 100.0 8E-106 3E-110 1044.9 77.5 882 48-1135 78-1026(1034)
2 3ar4_A Sarcoplasmic/endoplasmi 100.0 1E-105 3E-110 1043.4 64.6 903 47-1132 29-992 (995)
3 2zxe_A Na, K-ATPase alpha subu 100.0 4E-105 1E-109 1035.9 59.8 879 48-1132 73-1017(1028)
4 1mhs_A Proton pump, plasma mem 100.0 8.8E-98 3E-102 940.8 47.1 774 48-1131 93-880 (920)
5 3b8c_A ATPase 2, plasma membra 100.0 8.4E-96 3E-100 924.7 -12.7 787 48-1133 38-845 (885)
6 3rfu_A Copper efflux ATPase; a 100.0 6.5E-70 2.2E-74 675.9 38.2 493 112-930 193-696 (736)
7 3j08_A COPA, copper-exporting 100.0 1.4E-68 4.8E-73 660.9 41.2 485 114-930 103-598 (645)
8 3j09_A COPA, copper-exporting 100.0 2.4E-68 8.3E-73 668.0 44.0 488 112-931 179-677 (723)
9 2yj3_A Copper-transporting ATP 99.8 5.9E-26 2E-30 251.3 0.0 137 688-914 124-262 (263)
10 3a1c_A Probable copper-exporti 99.9 9.8E-21 3.4E-25 212.5 24.2 272 402-913 14-287 (287)
11 3skx_A Copper-exporting P-type 99.8 8.6E-20 2.9E-24 204.0 23.0 274 408-921 1-276 (280)
12 2hc8_A PACS, cation-transporti 99.8 1.5E-20 5.3E-25 176.2 6.6 99 131-283 5-103 (113)
13 2kij_A Copper-transporting ATP 99.7 8.7E-19 3E-23 167.5 6.0 97 132-282 12-114 (124)
14 3gwi_A Magnesium-transporting 99.7 2.2E-18 7.5E-23 175.2 4.2 140 507-700 17-165 (170)
15 4fe3_A Cytosolic 5'-nucleotida 99.5 1.9E-14 6.7E-19 162.0 7.4 143 697-900 138-291 (297)
16 3mn1_A Probable YRBI family ph 99.0 3.1E-10 1E-14 118.3 8.1 137 690-923 42-187 (189)
17 4dw8_A Haloacid dehalogenase-l 98.8 3.7E-09 1.3E-13 117.5 6.3 204 700-908 22-276 (279)
18 3n07_A 3-deoxy-D-manno-octulos 98.8 5.7E-09 1.9E-13 108.9 6.6 96 708-893 60-158 (195)
19 1k1e_A Deoxy-D-mannose-octulos 98.8 1.8E-08 6.1E-13 104.0 10.1 129 701-920 36-173 (180)
20 3mpo_A Predicted hydrolase of 98.7 1.2E-08 4E-13 113.5 7.3 208 700-908 22-276 (279)
21 3ij5_A 3-deoxy-D-manno-octulos 98.7 2.7E-08 9.2E-13 105.1 9.6 108 691-894 73-183 (211)
22 3n28_A Phosphoserine phosphata 98.7 2.1E-08 7.2E-13 114.6 8.6 150 700-923 178-333 (335)
23 3dnp_A Stress response protein 98.7 1.7E-08 5.9E-13 112.7 7.7 77 836-913 201-286 (290)
24 3ewi_A N-acylneuraminate cytid 98.7 2.4E-08 8.3E-13 101.2 7.3 107 688-893 30-141 (168)
25 3mmz_A Putative HAD family hyd 98.6 5.9E-08 2E-12 99.6 9.7 115 691-902 36-159 (176)
26 1l6r_A Hypothetical protein TA 98.6 3.4E-08 1.1E-12 106.0 7.5 178 698-894 20-212 (227)
27 3dao_A Putative phosphatse; st 98.6 2.3E-07 7.9E-12 103.2 13.6 189 700-893 39-269 (283)
28 3n1u_A Hydrolase, HAD superfam 98.6 4.6E-08 1.6E-12 101.9 6.9 124 700-913 39-177 (191)
29 2pq0_A Hypothetical conserved 98.5 2.9E-07 1E-11 100.8 11.4 57 837-894 183-242 (258)
30 3e8m_A Acylneuraminate cytidyl 98.5 1.7E-07 5.8E-12 94.9 8.8 109 708-907 39-156 (164)
31 3l7y_A Putative uncharacterize 98.5 1.9E-07 6.5E-12 105.1 8.6 58 836-894 227-287 (304)
32 4ap9_A Phosphoserine phosphata 98.5 2.4E-07 8.4E-12 96.6 8.2 117 700-900 79-195 (201)
33 1svj_A Potassium-transporting 98.4 8.2E-07 2.8E-11 87.9 11.3 106 533-703 49-156 (156)
34 3fzq_A Putative hydrolase; YP_ 98.4 3.7E-07 1.2E-11 100.8 7.7 59 836-895 199-260 (274)
35 3pgv_A Haloacid dehalogenase-l 98.4 5.4E-07 1.9E-11 100.2 8.5 57 832-889 202-263 (285)
36 1rkq_A Hypothetical protein YI 98.4 4.2E-07 1.4E-11 101.0 7.4 62 831-893 190-256 (282)
37 2r8e_A 3-deoxy-D-manno-octulos 98.3 8.4E-07 2.9E-11 92.0 9.1 97 708-894 61-160 (188)
38 2zos_A MPGP, mannosyl-3-phosph 98.3 1.6E-06 5.4E-11 94.3 10.3 58 836-893 178-239 (249)
39 1l7m_A Phosphoserine phosphata 98.3 8.1E-07 2.8E-11 93.4 7.7 125 700-897 76-206 (211)
40 3r4c_A Hydrolase, haloacid deh 98.2 2.1E-06 7.3E-11 94.4 10.0 58 836-894 193-253 (268)
41 3m1y_A Phosphoserine phosphata 98.2 1.5E-06 5.2E-11 91.9 8.5 129 699-900 74-208 (217)
42 1u02_A Trehalose-6-phosphate p 98.2 2.8E-06 9.6E-11 91.8 9.8 177 700-893 23-211 (239)
43 2b30_A Pvivax hypothetical pro 98.2 8.1E-07 2.8E-11 99.6 5.6 60 832-892 217-281 (301)
44 1y8a_A Hypothetical protein AF 98.2 2.2E-06 7.7E-11 97.5 8.4 72 835-909 205-287 (332)
45 3p96_A Phosphoserine phosphata 98.2 2.3E-06 7.8E-11 100.7 8.6 122 700-893 256-380 (415)
46 3kd3_A Phosphoserine phosphohy 98.2 2.2E-06 7.5E-11 90.4 7.5 134 700-901 82-218 (219)
47 4eze_A Haloacid dehalogenase-l 98.1 3.2E-06 1.1E-10 95.2 8.4 120 700-892 179-302 (317)
48 1rlm_A Phosphatase; HAD family 98.1 1.3E-05 4.3E-10 88.4 12.2 58 836-894 190-250 (271)
49 3zx4_A MPGP, mannosyl-3-phosph 98.1 1.5E-05 5E-10 87.2 12.5 54 836-893 175-233 (259)
50 3m9l_A Hydrolase, haloacid deh 98.1 6E-06 2.1E-10 86.5 8.2 124 699-906 69-200 (205)
51 4ex6_A ALNB; modified rossman 98.1 3.3E-06 1.1E-10 90.6 6.2 129 699-905 103-235 (237)
52 1nf2_A Phosphatase; structural 98.0 2.2E-06 7.4E-11 94.4 4.1 61 832-893 183-248 (268)
53 1rku_A Homoserine kinase; phos 98.0 2.2E-05 7.7E-10 82.2 11.7 124 700-900 69-195 (206)
54 1te2_A Putative phosphatase; s 98.0 1.3E-05 4.3E-10 84.9 9.7 119 700-900 94-220 (226)
55 3fvv_A Uncharacterized protein 98.0 1.4E-05 4.8E-10 85.4 9.6 41 700-740 92-132 (232)
56 1nnl_A L-3-phosphoserine phosp 98.0 8.5E-06 2.9E-10 86.8 7.8 131 699-900 85-222 (225)
57 1wr8_A Phosphoglycolate phosph 98.0 3.7E-05 1.3E-09 82.4 12.6 178 699-894 19-212 (231)
58 1nrw_A Hypothetical protein, h 98.0 6.4E-05 2.2E-09 83.5 14.9 57 837-894 216-275 (288)
59 2p9j_A Hypothetical protein AQ 98.0 1E-05 3.6E-10 81.3 7.6 105 701-895 37-144 (162)
60 3mc1_A Predicted phosphatase, 98.0 1.1E-05 3.8E-10 85.7 8.0 121 699-901 85-214 (226)
61 2rbk_A Putative uncharacterize 97.9 1.4E-05 4.9E-10 87.4 8.9 63 837-900 187-254 (261)
62 4gxt_A A conserved functionall 97.9 1.4E-05 4.8E-10 91.9 7.9 40 700-739 221-260 (385)
63 1s2o_A SPP, sucrose-phosphatas 97.9 4.1E-05 1.4E-09 82.8 11.0 62 832-894 155-228 (244)
64 1xvi_A MPGP, YEDP, putative ma 97.8 0.00015 5.3E-09 79.8 14.7 40 700-739 26-65 (275)
65 3d6j_A Putative haloacid dehal 97.8 2.7E-05 9.3E-10 82.3 7.5 41 700-740 89-129 (225)
66 2pib_A Phosphorylated carbohyd 97.8 2.2E-05 7.7E-10 82.2 6.8 126 699-901 83-212 (216)
67 2hsz_A Novel predicted phospha 97.7 2.8E-05 9.5E-10 84.0 6.5 42 699-740 113-154 (243)
68 3sd7_A Putative phosphatase; s 97.7 2.2E-05 7.5E-10 84.4 5.4 121 699-901 109-239 (240)
69 3s6j_A Hydrolase, haloacid deh 97.7 1.9E-05 6.3E-10 84.2 4.6 122 699-900 90-218 (233)
70 2go7_A Hydrolase, haloacid deh 97.7 2.6E-05 8.9E-10 81.0 5.3 118 700-900 85-203 (207)
71 3nas_A Beta-PGM, beta-phosphog 97.7 6.6E-05 2.3E-09 80.0 8.6 118 700-898 92-209 (233)
72 3e58_A Putative beta-phosphogl 97.7 3.8E-05 1.3E-09 80.3 6.3 123 700-899 89-212 (214)
73 3ddh_A Putative haloacid dehal 97.7 9.5E-05 3.2E-09 78.4 9.6 116 700-900 105-232 (234)
74 2nyv_A Pgpase, PGP, phosphogly 97.7 4.3E-05 1.5E-09 81.2 6.5 125 699-901 82-208 (222)
75 2fue_A PMM 1, PMMH-22, phospho 97.6 0.00011 3.9E-09 80.2 9.3 56 837-893 197-257 (262)
76 3f9r_A Phosphomannomutase; try 97.6 3.3E-05 1.1E-09 83.6 4.9 42 837-879 187-233 (246)
77 3umb_A Dehalogenase-like hydro 97.6 5.4E-05 1.8E-09 80.7 6.2 124 699-901 98-226 (233)
78 2fea_A 2-hydroxy-3-keto-5-meth 97.6 9.8E-05 3.4E-09 79.3 7.6 136 699-900 76-214 (236)
79 3um9_A Haloacid dehalogenase, 97.6 6.1E-05 2.1E-09 80.0 5.9 120 699-900 95-222 (230)
80 2wf7_A Beta-PGM, beta-phosphog 97.5 5.6E-05 1.9E-09 79.7 5.4 46 850-897 162-207 (221)
81 3kzx_A HAD-superfamily hydrola 97.5 0.00013 4.4E-09 77.7 8.2 116 699-901 102-225 (231)
82 2om6_A Probable phosphoserine 97.5 0.00013 4.3E-09 77.7 8.0 121 700-900 99-228 (235)
83 1swv_A Phosphonoacetaldehyde h 97.5 5.8E-05 2E-09 82.5 5.4 40 700-739 103-142 (267)
84 2hcf_A Hydrolase, haloacid deh 97.5 0.0001 3.4E-09 78.5 7.0 41 700-740 93-134 (234)
85 3nuq_A Protein SSM1, putative 97.5 8.4E-05 2.9E-09 82.1 6.5 125 700-900 142-277 (282)
86 3iru_A Phoshonoacetaldehyde hy 97.4 0.00013 4.4E-09 80.0 6.7 41 700-740 111-151 (277)
87 2hdo_A Phosphoglycolate phosph 97.4 5.5E-05 1.9E-09 79.3 3.5 40 700-740 83-122 (209)
88 3ed5_A YFNB; APC60080, bacillu 97.4 0.00055 1.9E-08 72.9 11.4 122 699-901 102-230 (238)
89 2hoq_A Putative HAD-hydrolase 97.4 0.00051 1.7E-08 73.6 10.9 41 700-740 94-134 (241)
90 2no4_A (S)-2-haloacid dehaloge 97.4 0.00017 5.8E-09 77.3 7.0 41 700-740 105-145 (240)
91 4eek_A Beta-phosphoglucomutase 97.4 0.00012 4.2E-09 79.5 5.8 42 698-739 108-149 (259)
92 3u26_A PF00702 domain protein; 97.4 0.00027 9.4E-09 75.1 8.0 120 700-901 100-226 (234)
93 2ah5_A COG0546: predicted phos 97.4 0.00026 9E-09 74.3 7.6 118 700-900 84-208 (210)
94 3l8h_A Putative haloacid dehal 97.3 0.00018 6.3E-09 73.3 5.9 54 849-902 117-176 (179)
95 1zrn_A L-2-haloacid dehalogena 97.3 0.00014 4.9E-09 77.4 5.3 41 700-740 95-135 (232)
96 2amy_A PMM 2, phosphomannomuta 97.3 0.00032 1.1E-08 75.7 8.0 58 832-890 181-245 (246)
97 3dv9_A Beta-phosphoglucomutase 97.3 0.00018 6.2E-09 77.3 5.9 41 698-739 106-146 (247)
98 3qnm_A Haloacid dehalogenase-l 97.3 0.00037 1.3E-08 74.2 8.0 123 700-907 107-236 (240)
99 3qxg_A Inorganic pyrophosphata 97.3 0.00018 6E-09 77.4 5.4 40 699-739 108-147 (243)
100 3l5k_A Protein GS1, haloacid d 97.3 0.0001 3.5E-09 79.7 3.2 49 851-900 191-242 (250)
101 2hi0_A Putative phosphoglycola 97.2 0.00045 1.5E-08 74.2 7.5 40 700-739 110-149 (240)
102 2wm8_A MDP-1, magnesium-depend 97.1 0.00061 2.1E-08 70.1 7.4 41 700-740 68-109 (187)
103 3gyg_A NTD biosynthesis operon 97.1 0.002 7E-08 71.2 12.2 65 830-895 202-271 (289)
104 1qq5_A Protein (L-2-haloacid d 97.0 0.00069 2.3E-08 73.3 7.0 39 700-740 93-131 (253)
105 3umg_A Haloacid dehalogenase; 97.0 0.00076 2.6E-08 72.5 7.2 121 700-903 116-248 (254)
106 2fdr_A Conserved hypothetical 97.0 0.00076 2.6E-08 71.3 6.9 52 849-900 159-218 (229)
107 2gmw_A D,D-heptose 1,7-bisphos 97.0 0.00076 2.6E-08 70.9 6.8 52 849-900 147-202 (211)
108 3k1z_A Haloacid dehalogenase-l 97.0 0.00071 2.4E-08 73.8 6.4 124 700-901 106-235 (263)
109 3umc_A Haloacid dehalogenase; 96.9 0.00065 2.2E-08 73.2 5.6 119 700-901 120-250 (254)
110 2pke_A Haloacid delahogenase-l 96.9 0.0031 1.1E-07 67.9 10.8 40 700-740 112-151 (251)
111 3smv_A S-(-)-azetidine-2-carbo 96.9 0.00081 2.8E-08 71.5 6.0 53 849-901 171-234 (240)
112 2w43_A Hypothetical 2-haloalka 96.9 0.0009 3.1E-08 69.4 5.9 40 699-740 73-112 (201)
113 2kmv_A Copper-transporting ATP 96.9 0.0043 1.5E-07 63.2 10.8 53 605-700 133-185 (185)
114 2fi1_A Hydrolase, haloacid deh 96.8 0.001 3.4E-08 68.2 5.8 38 701-739 83-120 (190)
115 2qlt_A (DL)-glycerol-3-phospha 96.8 0.0009 3.1E-08 73.5 5.7 40 700-739 114-154 (275)
116 3ib6_A Uncharacterized protein 96.7 0.0053 1.8E-07 63.1 10.3 41 700-740 34-77 (189)
117 2o2x_A Hypothetical protein; s 96.6 0.0016 5.6E-08 68.7 5.2 52 850-901 154-209 (218)
118 3pdw_A Uncharacterized hydrola 96.4 0.019 6.5E-07 62.3 12.5 42 699-740 21-65 (266)
119 2x4d_A HLHPP, phospholysine ph 96.4 0.078 2.7E-06 57.1 17.4 40 701-740 33-75 (271)
120 3cnh_A Hydrolase family protei 96.2 0.0019 6.5E-08 66.7 3.2 40 700-740 86-125 (200)
121 3vay_A HAD-superfamily hydrola 96.0 0.007 2.4E-07 63.8 6.5 53 849-901 171-226 (230)
122 2i6x_A Hydrolase, haloacid deh 96.0 0.0021 7.1E-08 67.0 1.8 36 700-736 89-124 (211)
123 3qgm_A P-nitrophenyl phosphata 95.9 0.015 5.1E-07 63.2 8.5 43 698-740 22-67 (268)
124 3kbb_A Phosphorylated carbohyd 95.9 0.013 4.5E-07 61.1 7.6 42 700-741 84-125 (216)
125 2gfh_A Haloacid dehalogenase-l 95.8 0.011 3.9E-07 64.0 7.2 40 700-740 121-160 (260)
126 2pr7_A Haloacid dehalogenase/e 95.7 0.0015 5E-08 62.9 -0.4 41 699-739 17-57 (137)
127 3nvb_A Uncharacterized protein 95.6 0.0092 3.2E-07 67.7 5.3 34 703-736 259-292 (387)
128 2oda_A Hypothetical protein ps 95.5 0.026 8.9E-07 58.2 8.0 35 700-734 36-70 (196)
129 1vjr_A 4-nitrophenylphosphatas 95.4 0.085 2.9E-06 57.2 12.3 42 699-740 32-76 (271)
130 2b0c_A Putative phosphatase; a 95.4 0.0015 5.2E-08 67.8 -2.0 31 700-730 91-121 (206)
131 3epr_A Hydrolase, haloacid deh 95.1 0.05 1.7E-06 58.9 9.1 41 700-741 22-65 (264)
132 2c4n_A Protein NAGD; nucleotid 95.0 0.075 2.6E-06 56.3 10.1 60 837-896 177-246 (250)
133 2zg6_A Putative uncharacterize 95.0 0.045 1.5E-06 57.3 8.2 40 700-740 95-134 (220)
134 3pct_A Class C acid phosphatas 95.0 0.035 1.2E-06 59.4 7.2 43 698-740 99-145 (260)
135 4as2_A Phosphorylcholine phosp 94.8 0.028 9.6E-07 62.8 6.1 42 696-737 139-180 (327)
136 4gib_A Beta-phosphoglucomutase 94.7 0.03 1E-06 60.2 6.0 118 698-897 114-232 (250)
137 1qyi_A ZR25, hypothetical prot 94.6 0.062 2.1E-06 61.4 8.6 42 700-741 215-256 (384)
138 2ho4_A Haloacid dehalogenase-l 94.5 0.32 1.1E-05 52.0 13.4 63 838-900 181-253 (259)
139 4dcc_A Putative haloacid dehal 94.2 0.015 5.1E-07 61.5 1.9 34 700-734 112-145 (229)
140 3ocu_A Lipoprotein E; hydrolas 94.1 0.048 1.7E-06 58.4 5.7 43 698-740 99-145 (262)
141 2arf_A Wilson disease ATPase; 94.0 0.23 8E-06 49.4 10.3 37 607-647 116-152 (165)
142 2p11_A Hypothetical protein; p 93.9 0.11 3.9E-06 54.7 8.3 40 699-739 95-134 (231)
143 2fpr_A Histidine biosynthesis 93.7 0.026 8.7E-07 57.2 2.5 40 700-739 42-96 (176)
144 1ltq_A Polynucleotide kinase; 93.3 0.043 1.5E-06 60.8 3.8 32 698-729 186-217 (301)
145 2i33_A Acid phosphatase; HAD s 93.1 0.098 3.4E-06 56.4 6.2 43 698-740 99-144 (258)
146 2oyc_A PLP phosphatase, pyrido 92.0 0.57 1.9E-05 51.7 10.7 44 697-740 34-80 (306)
147 1yns_A E-1 enzyme; hydrolase f 91.5 0.25 8.7E-06 53.2 6.9 38 699-736 129-166 (261)
148 4g9b_A Beta-PGM, beta-phosphog 90.0 0.28 9.7E-06 52.1 5.5 41 699-741 94-134 (243)
149 4fe3_A Cytosolic 5'-nucleotida 83.9 0.37 1.3E-05 53.0 2.0 35 401-436 16-59 (297)
150 2b82_A APHA, class B acid phos 83.0 0.49 1.7E-05 49.2 2.4 29 701-729 89-117 (211)
151 1yv9_A Hydrolase, haloacid deh 81.5 1.9 6.3E-05 46.1 6.5 42 699-740 20-65 (264)
152 2obb_A Hypothetical protein; s 81.2 1.4 4.9E-05 42.2 4.8 39 701-739 25-66 (142)
153 3zvl_A Bifunctional polynucleo 80.8 1.7 6E-05 50.1 6.3 26 701-726 88-113 (416)
154 3i28_A Epoxide hydrolase 2; ar 72.1 1.1 3.7E-05 53.5 1.3 26 700-725 100-125 (555)
155 2hhl_A CTD small phosphatase-l 70.5 1.3 4.5E-05 45.2 1.3 41 699-740 67-107 (195)
156 2g80_A Protein UTR4; YEL038W, 68.1 4 0.00014 43.5 4.6 35 699-737 124-158 (253)
157 2ght_A Carboxy-terminal domain 67.2 1.7 6E-05 43.7 1.4 41 699-740 54-94 (181)
158 3bwv_A Putative 5'(3')-deoxyri 58.3 15 0.0005 36.3 6.5 25 700-725 69-93 (180)
159 2i7d_A 5'(3')-deoxyribonucleot 54.7 4 0.00014 41.2 1.4 41 699-739 72-113 (193)
160 1xpj_A Hypothetical protein; s 47.6 9.8 0.00034 35.4 2.8 30 700-729 24-53 (126)
161 1q92_A 5(3)-deoxyribonucleotid 44.8 7.8 0.00027 39.1 1.8 41 700-740 75-116 (197)
162 1zjj_A Hypothetical protein PH 41.2 13 0.00045 39.3 3.0 42 698-739 15-59 (263)
163 1zjj_A Hypothetical protein PH 40.2 36 0.0012 35.8 6.3 51 849-899 201-258 (263)
164 3kc2_A Uncharacterized protein 37.9 25 0.00084 39.3 4.6 48 693-740 22-73 (352)
165 2jc9_A Cytosolic purine 5'-nuc 37.4 59 0.002 38.2 7.7 36 703-739 249-285 (555)
166 2jmz_A Hypothetical protein MJ 33.2 31 0.001 34.6 4.0 36 137-173 102-137 (186)
167 2hx1_A Predicted sugar phospha 32.5 33 0.0011 36.6 4.5 44 697-740 27-73 (284)
168 1ccw_A Protein (glutamate muta 31.0 1E+02 0.0035 28.9 7.1 80 635-739 26-113 (137)
169 3n28_A Phosphoserine phosphata 28.5 32 0.0011 37.9 3.5 48 694-741 37-95 (335)
170 2lcj_A PAB POLC intein; hydrol 26.5 60 0.002 32.3 4.8 35 137-172 92-126 (185)
171 1d1n_A Initiation factor 2; be 23.4 89 0.003 27.6 4.5 21 153-173 78-98 (99)
172 3fst_A 5,10-methylenetetrahydr 21.0 92 0.0032 33.7 5.2 44 686-729 80-124 (304)
No 1
>3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2yn9_A 2xzb_A 1iwc_A 1iwf_A
Probab=100.00 E-value=8.2e-106 Score=1044.86 Aligned_cols=882 Identities=17% Similarity=0.163 Sum_probs=681.7
Q ss_pred hhhcccCCCCceEecCCCcchhhhHHHHHHHHHHHHHHHHHHHHHhcccc--CC-------CCCCccchhhhhhHHHHHh
Q 001017 48 FEASVLNYSGNYVRTTKYTLATFFPKALFEQFRRVANVYFLICAILSFTP--LS-------PYSAVSNVLPLVVVIGATM 118 (1189)
Q Consensus 48 ~~~~~~~~g~N~i~~~k~~~~~flp~~l~~qf~~~~~~~fl~~~il~~~~--~~-------~~~~~~~~~~l~~vl~~s~ 118 (1189)
.++|+++||+|.++..+.+.+. +.+++||.++++++++++++++++. +. ..+.+...+++++++++++
T Consensus 78 a~~rl~~~G~N~l~~~~~~~~~---~~~~~q~~~~~~~il~~aa~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~vv~i~~ 154 (1034)
T 3ixz_A 78 AAELLLRDGPNALRPPRGTPEY---VKFARQLAGGLQCLMWVAAAICLIAFAIQASEGDLTTDDNLYLALALIAVVVVTG 154 (1034)
T ss_pred HHHHHHhhCCCCCCCCCCCCHH---HHHHHHHhChHHHHHHHHHHHHHHHHHHhhccCCCccccchhhhhhhheeeeHHH
Confidence 3678999999999988875543 8899999999999999999988763 11 1234566788889999999
Q ss_pred hHHHHHHHHHhhhhHHHh---cceEEEEecCCeEEEeecccCccccEEEeccCCcCCccEEEeecccCCceEEEEecCCC
Q 001017 119 GKEVLEDWRRKKQDIEVN---NRKVKVHCGEGAFDYTKWRDLKVGDVVKVEKDEFFPADLILLSSSYEEAICYVETTNLD 195 (1189)
Q Consensus 119 i~~~~~d~~~~~~~~~~n---~~~~~v~~r~g~~~~i~~~~l~vGDII~l~~ge~iPaD~vlL~~s~~~g~~~Vd~s~Lt 195 (1189)
+.++++++|++++.+.++ +++++|+ |||++++|++++|+|||||.|++||.||||++|+++++ +.||||+||
T Consensus 155 ~~~~~qe~ka~~al~~L~~l~~~~a~Vi-RdG~~~~I~~~eLv~GDiV~l~~Gd~VPAD~~ll~~~~----l~VdES~LT 229 (1034)
T 3ixz_A 155 CFGYYQEFKSTNIIASFKNLVPQQATVI-RDGDKFQINADQLVVGDLVEMKGGDRVPADIRILQAQG----RKVDNSSLT 229 (1034)
T ss_pred HHHHHHHHHHHHHHHHHhccCCCeeEEE-ECCEEEEEEHHHCCCCcEEEEcCCceecCCeEEEEeCC----ceEEecccC
Confidence 999999999999877665 5789999 99999999999999999999999999999999999986 899999999
Q ss_pred CCCcceecccccccccCCCccccccceEEEEeecCCCCceeeEEEEEEcCccccCCCCcccccCceeecCCeEEEEEEEe
Q 001017 196 GETNLKLKQALDATSNMHEDSNFQNFKAIIRCEDPNANLYTFVGSLELEEQQYPLTPQQLLLRDSKLRNTDCIYGAVIFT 275 (1189)
Q Consensus 196 GEs~~~~K~~~~~~~~~~~~~~~~~~~~~i~~e~pn~~~~~f~Gt~~~~g~~~~l~~~n~l~rgs~l~nt~~~~gvVv~t 275 (1189)
|||.|+.|.+....... .......|+||.+.+|. ++|+|++|
T Consensus 230 GES~pv~K~~~~~~~~~-----------------~~~~n~~f~GT~v~~G~---------------------~~~vVv~t 271 (1034)
T 3ixz_A 230 GESEPQTRSPECTHESP-----------------LETRNIAFFSTMCLEGT---------------------AQGLVVNT 271 (1034)
T ss_pred CCCCCeeccCCCccccc-----------------cccccceecceeEEeec---------------------ceEEEEee
Confidence 99999999886432100 01112456677776666 99999999
Q ss_pred ccccce---eccCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCcccccccccCCCCCCccCchh
Q 001017 276 GRDTKV---FQNSTGPPSKRSKVERRMDKIIYFLFGILVLMSFIGSIFFGIATREDLQDGKMKRWYLRPDDTTAYYDPKR 352 (1189)
Q Consensus 276 G~~Tk~---~~~~~~~~~k~s~l~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 352 (1189)
|.+|.+ ......++.+++|+++.++++..++..+.++++++.++++.++..
T Consensus 272 G~~T~~GkI~~~~~~~~~~~tpl~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~-------------------------- 325 (1034)
T 3ixz_A 272 GDRTIIGRIASLASGVENEKTPIAIEIEHFVDIIAGLAILFGATFFIVAMCIGY-------------------------- 325 (1034)
T ss_pred hhhhHhhHHHHhhcccccCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc--------------------------
Confidence 999954 455566778899999999999999988888888777766543211
Q ss_pred hHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHhccccccccccCCcccccCcchhhhccCeeEEEeCCCcccc
Q 001017 353 AAVAAVLHFLTALMLYGYLIPISLYVSIEIVKILQSIFINQDLHMYYEETDKPARARTSNLNEELGQVDTILSDKTGTLT 432 (1189)
Q Consensus 353 ~~~~~~~~~~~~l~l~~~~iP~~L~v~l~~~~~~~~~~i~~d~~m~~~~~~~~i~~~~~~~~E~Lg~v~~i~~DKTGTLT 432 (1189)
.+...+..++++++.+||++||++++++.++++.+| +++++++|+++++|+||++++||||||||||
T Consensus 326 ---~~~~~~~~~i~l~v~~iPe~Lp~~vti~la~~~~rm----------ak~~~lvr~l~avE~LG~v~~IcsDKTGTLT 392 (1034)
T 3ixz_A 326 ---TFLRAMVFFMAIVVAYVPEGLLATVTVCLSLTAKRL----------ASKNCVVKNLEAVETLGSTSVICSDKTGTLT 392 (1034)
T ss_pred ---hHHHHHHHHHHHHHheeccccHHHHHHHHHHHHHHH----------hhCCeEecChHHHHhhcCCcEEEcCCCCCcc
Confidence 123367788999999999999999999999999998 8899999999999999999999999999999
Q ss_pred ccceEEEEEEEcCeecCCCchHHHHHHHHhcCCCCccchhhhhccccccCCCCcCChhhhcCCCCCCCchHHHHHHHHHH
Q 001017 433 CNSMEFIKCSIAGTSYGRGVTEVERAMARRKGSPLEEEVTEEQEDKASIKGFNFEDERIMNGSWVNEPHADVIQKFLRLL 512 (1189)
Q Consensus 433 ~n~m~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l 512 (1189)
+|+|+|.++++++..+.....+. ..+. ...+.....+.++.++
T Consensus 393 ~n~m~v~~~~~~~~~~~~~~~~~-------------------------~~~~------------~~~~~~~~~~~l~~~~ 435 (1034)
T 3ixz_A 393 QNRMTVSHLWFDNHIHSADTTED-------------------------QSGQ------------TFDQSSETWRALCRVL 435 (1034)
T ss_pred cCeEEEEEEEECCccccccCccc-------------------------cccc------------ccCcCCHHHHHHHHHH
Confidence 99999999998887654321100 0000 0011234567889999
Q ss_pred hhhcceeccccCCCC--cEEEEcCChhHHHHHHHHHHCCcEEEEecCceeEEEecCCCCCcceeEEEEEeeeecCCCCCc
Q 001017 513 AICHTALPEVDEENG--KISYEAESPDEAAFVIAARELGFEFYERTQTSISVHELDPVTGTKVERSYSLLNVLEFSSSRK 590 (1189)
Q Consensus 513 alC~~~~~~~~~~~~--~~~~~~~sp~e~alv~~a~~~g~~~~~r~~~~~~v~~~~~~~~~~~~~~~~il~~~~F~s~rk 590 (1189)
++||++....+++.. .-....++|.|.|+++++...+.... +.+..|+++..+||+|+||
T Consensus 436 ~lc~~a~~~~~~~~~~~~~~~~~gdp~e~All~~~~~~~~~~~------------------~~~~~~~~~~~~pF~s~rk 497 (1034)
T 3ixz_A 436 TLCNRAAFKSGQDAVPVPKRIVIGDASETALLKFSELTLGNAM------------------GYRERFPKVCEIPFNSTNK 497 (1034)
T ss_pred HHhccceeccCcCCCcccCceeccCchHHHHHHHHHHhCCChH------------------HHHHhCcceEEeeecCCCc
Confidence 999998765332211 11234689999999999988764321 1236788899999999999
Q ss_pred eEEEEEEeCC---CeEEEEEecCchHHHHHhhhc---------chhhHHHHHHHHHHHHhccCeEEEEEEEecCHHHHHH
Q 001017 591 RMSVIVRSEE---GTLLLLSKGADSVMFERLAEN---------GREFEEQTKEHINEYADAGLRTLILAYRELDEKEYKQ 658 (1189)
Q Consensus 591 rmsviv~~~~---~~~~l~~KGa~~~i~~~~~~~---------~~~~~~~~~~~l~~~a~~Glr~l~~a~r~l~~~e~~~ 658 (1189)
||+++++.++ +++++|+|||||.|+++|... +++.++.+.+.+++++.+|+|||++|+|.++++++.+
T Consensus 498 ~m~~v~~~~~~~~~~~~l~~KGApe~il~~c~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~G~RvLa~A~~~l~~~~~~~ 577 (1034)
T 3ixz_A 498 FQLSIHTLEDPRDPRHVLVMKGAPERVLERCSSILIKGQELPLDEQWREAFQTAYLSLGGLGERVLGFCQLYLSEKDYPP 577 (1034)
T ss_pred eEEEEEEecCCCCccEEEEEeCChHHHHHHhHHhhcCCceecCCHHHHHHHHHHHHHHHhcCcHhheEeEEecChhhccc
Confidence 9999887643 689999999999999999742 3456778889999999999999999999999876654
Q ss_pred HHHHHHHHhhhhhhcHHHHHHHHHHHHhcCceEEEeeeecccCCCCcHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcC
Q 001017 659 FNEEFTEAKNSVSADREELAEEIAEKIEKNLILLGATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACS 738 (1189)
Q Consensus 659 ~~~~~~~a~~~~~~~~~~~~~~~~~~ie~~l~llG~~~ieD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~g 738 (1189)
+.... . +..+.+|+||+|+|+++++||+|++++++|++|+++||+|||+|||+..||.++|++||
T Consensus 578 ~~~~~----------~-----~~~~~~e~~l~~lGlv~i~Dp~r~~~~~aI~~l~~aGI~vvmiTGd~~~tA~~ia~~lg 642 (1034)
T 3ixz_A 578 GYAFD----------V-----EAMNFPTSGLSFAGLVSMIDPPRATVPDAVLKCRTAGIRVIMVTGDHPITAKAIAASVG 642 (1034)
T ss_pred ccccc----------h-----hhhhccccCcEEEEEEeccCCCchhHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcC
Confidence 32211 1 11245689999999999999999999999999999999999999999999999999999
Q ss_pred cccCCceEEEEeCCCCcccccchhhHHHHHHHHHHHhHHHHHhhhhhccccCCCCCCCeEEEEcCchhhhhhhHHHHHHH
Q 001017 739 LLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLF 818 (1189)
Q Consensus 739 i~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~ 818 (1189)
|..++...+ .. ...+...... ..........+++|..+....++++.+
T Consensus 643 i~~~~~~~i---------------------~~-----~~~~~~~~~~----~~~~~~~~~~~~~g~~l~~~~~~~l~~-- 690 (1034)
T 3ixz_A 643 IISEGSETV---------------------ED-----IAARLRVPVD----QVNRKDARACVINGMQLKDMDPSELVE-- 690 (1034)
T ss_pred CCCCCchHH---------------------HH-----HHHhhCccch----hccccccceeEEecHhhhhCCHHHHHH--
Confidence 976432100 00 0000000000 001223456789999988766555443
Q ss_pred HHHHhccceeEEEeCCcccHHHHHHHHHhcCCCeEEEEcCCCCChhhhhhcCeeEEecCCcchhhhhccccccccchh--
Q 001017 819 LELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQFRF-- 896 (1189)
Q Consensus 819 ~~~~~~~~~vv~~r~sP~qK~~iV~~l~~~~~~~vl~iGDG~ND~~ml~~A~vGI~i~g~~~~~a~~~sD~~i~~f~~-- 896 (1189)
....++..+|||++|+||.++|+.+|+ .|+.|+|+|||.||++||++||+||||+++..+.|+++||+++.++++
T Consensus 691 --~~~~~~~~v~ar~~P~~K~~iv~~lq~-~g~~V~a~GDG~ND~~mLk~A~vGIAMg~ng~d~aK~aAD~Vl~~~~~~g 767 (1034)
T 3ixz_A 691 --ALRTHPEMVFARTSPQQKLVIVESCQR-LGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDAAKNAADMILLDDNFAS 767 (1034)
T ss_pred --HHHhCCceEEEecCHHHHHHHHHHHHH-cCCEEEEECCcHHhHHHHHHCCeeEEeCCccCHHHHHhcCEEeccCCchH
Confidence 334556679999999999999999998 799999999999999999999999999756666799999999998776
Q ss_pred hHHHHHHhhhhhhhhhhHhHHHHHHHHHHHHHHHHHHHhhcccccccchhhHHHHHHHHHHhhHHHHhhhhcccCCChHH
Q 001017 897 LERLLLVHGHWCYRRISSMICYFFYKNIAFGFTLFFFEAYASFSGQPVYNDWFLSLYNVFFTSLPVIALGVFDQDVSARF 976 (1189)
Q Consensus 897 l~~lll~~GR~~~~~i~~~i~~~~~kni~~~~~~~~~~~~~~~sg~~~~~~~~~l~~n~i~~~lp~~~l~~~~~~~~~~~ 976 (1189)
+..+ +.|||++|.|+++++.|.+++|+..+++.+++.++. ...++.++|++|+|++++.+|+++++.+. +.++.
T Consensus 768 I~~a-i~~GR~i~~ni~k~i~~~l~~ni~~~~~~~~~~~~~---~~~pl~~~qiL~inl~~d~~palal~~e~--~~~~~ 841 (1034)
T 3ixz_A 768 IVTG-VEQGRLIFDNLKKSIAYTLTKNIPELTPYLIYITVS---VPLPLGCITILFIELCTDIFPSVSLAYEK--AESDI 841 (1034)
T ss_pred HHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh---hhhhHHHHHHHHHHHHHHHHHHHHhhcCC--CChhh
Confidence 5555 789999999999999999999999999999888774 33568999999999999999999999753 33444
Q ss_pred HhhCccchhccc-cccccchhhhhhh-hhhhHHHHHHHHHHHHHhhcccccc------------C-C--------Cce--
Q 001017 977 CLKFPLLYQEGV-QNILFSWTRILGW-ALNGVANAAIIFFFCIHAMKQQAFR------------K-G--------GEV-- 1031 (1189)
Q Consensus 977 ~~~~P~ly~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~------------~-~--------g~~-- 1031 (1189)
+.+.|+ .+ ++.+++.+.++.. +..|++++++.|+.+++.+....+. . . |..
T Consensus 842 m~~~Pr----~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 917 (1034)
T 3ixz_A 842 MHLRPR----NPKRDRLVNEPLAAYSYFQIGAIQSFAGFTDYFTAMAQEGWFPLLCVGLRPQWENHHLQDLQDSYGQEWT 917 (1034)
T ss_pred hhCCCC----CCccccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCccccccccccccccccccccccccccccc
Confidence 445554 44 4678888876654 4458888877776665543221110 0 0 000
Q ss_pred -----eehhhhhhHHHHHHHHHHHHHHHH-hccc---c--hhhHHHHHHHHHHHHHHHHHHHhccCccccchhHHHHHHH
Q 001017 1032 -----IGLEILGTTMYTCVVWVVNCQMAL-SVTY---F--TYIQHLFIWGGITFWYIFLLAYGAMDPYISTTAYKVFIEA 1100 (1189)
Q Consensus 1032 -----~~~~~~~~~~f~~~v~~~n~~~~l-~~~~---~--t~~~~~~i~~si~~~~i~~~i~~~~~~~~~~~~~~~~~~~ 1100 (1189)
.......|++|+++++.+.+..+. .+.. | .++.+..+|+++++.+++++++.++|+. +. +|+.
T Consensus 918 ~~~~~~~~~~~~t~~f~~lv~~q~~~~~~~r~~~~s~~~~~~~~N~~l~~~~~~~~~l~~~~~~~p~~-~~-----~f~~ 991 (1034)
T 3ixz_A 918 FGQRLYQQYTCYTVFFISIEMCQIADVLIRKTRRLSAFQQGFFRNRILVIAIVFQVCIGCFLCYCPGM-PN-----IFNF 991 (1034)
T ss_pred hhhhhhhhhhHHHHHHHHHHHHHHHHHHhhccCCCcccccCCcccHHHHHHHHHHHHHHHHHHHhhhH-HH-----HhcC
Confidence 001124688888888776666543 2221 2 2357888899999999999999998853 33 6778
Q ss_pred hccChHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC
Q 001017 1101 CAPAPSFWLITLLVLMSSLLPYFTYSAIQMRFFPL 1135 (1189)
Q Consensus 1101 ~~~~~~~wl~~ll~~~~~l~~~~~~k~~~~~~~P~ 1135 (1189)
.+.++..|+.+++++++.++.+++.|+++|.+.++
T Consensus 992 ~~l~~~~w~~~~~~~~~~~~~~e~~K~~~r~~~~~ 1026 (1034)
T 3ixz_A 992 MPIRFQWWLVPMPFGLLIFVYDEIRKLGVRCCPGS 1026 (1034)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 88999999999999999999999999999877543
No 2
>3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ...
Probab=100.00 E-value=1e-105 Score=1043.41 Aligned_cols=903 Identities=19% Similarity=0.214 Sum_probs=666.5
Q ss_pred chhhcccCCCCceEecCCCcchhhhHHHHHHHHHHHHHHHHHHHHHhcccc-CCCC-----CCccchhhhhhHHHHHhhH
Q 001017 47 SFEASVLNYSGNYVRTTKYTLATFFPKALFEQFRRVANVYFLICAILSFTP-LSPY-----SAVSNVLPLVVVIGATMGK 120 (1189)
Q Consensus 47 ~~~~~~~~~g~N~i~~~k~~~~~flp~~l~~qf~~~~~~~fl~~~il~~~~-~~~~-----~~~~~~~~l~~vl~~s~i~ 120 (1189)
+.++|+++||+|.++.+++..+. +.|++||+++++++|++++++++++ +.+. ..|...+.++++++++++.
T Consensus 29 e~~~r~~~~G~N~l~~~~~~~~~---~~~~~qf~~~~~~~l~~~a~~s~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~i 105 (995)
T 3ar4_A 29 QVKRHLEKYGHNELPAEEGKSLW---ELVIEQFEDLLVRILLLAACISFVLAWFEEGEETITAFVEPFVILLILIANAIV 105 (995)
T ss_dssp HHHHHHHHHCCSSCCCCCCCCHH---HHHHGGGCSHHHHHHHHHHHHHHHHTTSCCSSGGGSSSHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhcCCCccCCCCCCcHH---HHHHHHHHHHHHHHHHHHHHHHHHHHhccccccchhhHHHhHHhhHHHHHHHHH
Confidence 34678889999999998764432 8999999999999999999999886 3321 1333445556667778888
Q ss_pred HHHHHHHHhhhhHHH---hcceEEEEecCCe--EEEeecccCccccEEEeccCCcCCccEEEeecccCCceEEEEecCCC
Q 001017 121 EVLEDWRRKKQDIEV---NNRKVKVHCGEGA--FDYTKWRDLKVGDVVKVEKDEFFPADLILLSSSYEEAICYVETTNLD 195 (1189)
Q Consensus 121 ~~~~d~~~~~~~~~~---n~~~~~v~~r~g~--~~~i~~~~l~vGDII~l~~ge~iPaD~vlL~~s~~~g~~~Vd~s~Lt 195 (1189)
..+++++..++.+.+ .+.+++|+ |||+ .++|++++|+|||||.|++||.|||||+|++++. +.|+||||+||
T Consensus 106 ~~~qe~~a~~al~~L~~~~~~~a~V~-R~g~~~~~~I~~~~lv~GDiV~l~~Gd~IPaD~~ll~~~s--~~l~VdeS~LT 182 (995)
T 3ar4_A 106 GVWQERNAENAIEALKEYEPEMGKVY-RADRKSVQRIKARDIVPGDIVEVAVGDKVPADIRILSIKS--TTLRVDQSILT 182 (995)
T ss_dssp HHHHHHHCCCHHHHHGGGSCSEEEEE-BTTCSSCEEEEGGGCCTTCEEEEETTCBCCSEEEEEEECS--SCEEEECHHHH
T ss_pred HHHHHHHHHHHHHHHHccCCCeEEEE-eCCCceEEEEEHHHCCCCCEEEECCCCcccccEEEEEEee--ceEEEEccccc
Confidence 888888877765544 47889999 9887 6999999999999999999999999999976532 23999999999
Q ss_pred CCCcceecccccccccCCCccccccceEEEEeecCCCCceeeEEEEEEcCccccCCCCcccccCceeecCCeEEEEEEEe
Q 001017 196 GETNLKLKQALDATSNMHEDSNFQNFKAIIRCEDPNANLYTFVGSLELEEQQYPLTPQQLLLRDSKLRNTDCIYGAVIFT 275 (1189)
Q Consensus 196 GEs~~~~K~~~~~~~~~~~~~~~~~~~~~i~~e~pn~~~~~f~Gt~~~~g~~~~l~~~n~l~rgs~l~nt~~~~gvVv~t 275 (1189)
|||.|+.|.+++... | ...+.+.+|++++||.+.+ |+++|+|++|
T Consensus 183 GES~pv~K~~~~~~~-------------------~---------------~~~~~~~~~~v~~GT~v~~-G~~~~~V~~t 227 (995)
T 3ar4_A 183 GESVSVIKHTEPVPD-------------------P---------------RAVNQDKKNMLFSGTNIAA-GKALGIVATT 227 (995)
T ss_dssp CCCSCEEECCSCCCC-------------------T---------------TCCGGGCTTEECTTCEEEE-CEEEEEEEEC
T ss_pred CCCcceeccccccCC-------------------c---------------ccCcccccceEecCCEEEc-ceEEEEEEEc
Confidence 999999999864321 0 1123456788888888886 6799999999
Q ss_pred cccccee---ccCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCcccccccccCCCCCCccCchh
Q 001017 276 GRDTKVF---QNSTGPPSKRSKVERRMDKIIYFLFGILVLMSFIGSIFFGIATREDLQDGKMKRWYLRPDDTTAYYDPKR 352 (1189)
Q Consensus 276 G~~Tk~~---~~~~~~~~k~s~l~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 352 (1189)
|.+|+++ +....++.+++++|+.+|++..+++++++++|++.++++..+....... ..|+
T Consensus 228 G~~T~~g~i~~~~~~~~~~~tplq~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~-------------- 290 (995)
T 3ar4_A 228 GVSTEIGKIRDQMAATEQDKTPLQQKLDEFGEQLSKVISLICVAVWLINIGHFNDPVHG---GSWI-------------- 290 (995)
T ss_dssp GGGSHHHHHHHHHHTCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTGGGGGSCSSS---SCHH--------------
T ss_pred CcchHHHHHHHHhhcCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccc---chHH--------------
Confidence 9999764 4455677889999999999999999988888877765543211100000 0121
Q ss_pred hHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHhccccccccccCCcccccCcchhhhccCeeEEEeCCCcccc
Q 001017 353 AAVAAVLHFLTALMLYGYLIPISLYVSIEIVKILQSIFINQDLHMYYEETDKPARARTSNLNEELGQVDTILSDKTGTLT 432 (1189)
Q Consensus 353 ~~~~~~~~~~~~l~l~~~~iP~~L~v~l~~~~~~~~~~i~~d~~m~~~~~~~~i~~~~~~~~E~Lg~v~~i~~DKTGTLT 432 (1189)
......|..++++++.+|||+||++++++.++++.++ +++++++|+++++|+||++++||||||||||
T Consensus 291 --~~~~~~~~~ai~l~v~aiP~~Lp~~vt~~la~~~~~m----------a~~~~lvr~~~~iE~Lg~v~~ic~DKTGTLT 358 (995)
T 3ar4_A 291 --RGAIYYFKIAVALAVAAIPEGLPAVITTCLALGTRRM----------AKKNAIVRSLPSVETLGCTSVICSDKTGTLT 358 (995)
T ss_dssp --HHHHHHHHHHHHHHHHHSCTTHHHHHHHHHHHHHHHH----------HHTTEEESCTTHHHHHHTCCEEEEESTTTTB
T ss_pred --HHHHHHHHHHHHHHHHhcCcchHHHHHHHHHHHHHHh----------ccCCcEeccchhhhhhcCceEEEecCCCCcc
Confidence 1223356678889999999999999999999999988 7899999999999999999999999999999
Q ss_pred ccceEEEEEEEcCeecCCCchHHHHHHHHhcCCCCccchhhhhccccccCCCCcCChhhhcCCCCCCCchHHHHHHHHHH
Q 001017 433 CNSMEFIKCSIAGTSYGRGVTEVERAMARRKGSPLEEEVTEEQEDKASIKGFNFEDERIMNGSWVNEPHADVIQKFLRLL 512 (1189)
Q Consensus 433 ~n~m~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l 512 (1189)
+|+|+|.++++.+..++......+. ...+... .+. .....++........+...+++.++
T Consensus 359 ~n~m~v~~~~~~~~~~~~~~~~~~~---~~~~~~~-------------~p~----~~~~~~~~~~~~~~~~~~~~l~~~~ 418 (995)
T 3ar4_A 359 TNQMSVCKMFIIDKVDGDFCSLNEF---SITGSTY-------------APE----GEVLKNDKPIRSGQFDGLVELATIC 418 (995)
T ss_dssp CCCCEEEEEEEEEEEETTEEEEEEE---EECCSSS-------------SSC----CCEEETTEECCGGGCHHHHHHHHHH
T ss_pred cCceEEEEEEecCcccCccccccee---eccCCCc-------------CCc----cccccccccccccccHHHHHHHHHH
Confidence 9999999998765443210000000 0000000 000 0000000001112334567889999
Q ss_pred hhhcceeccccCCCCcEEEEcCChhHHHHHHHHHHCCcEEEEecCceeEEEecCCCCCcceeEEEEEeeeecCCCCCceE
Q 001017 513 AICHTALPEVDEENGKISYEAESPDEAAFVIAARELGFEFYERTQTSISVHELDPVTGTKVERSYSLLNVLEFSSSRKRM 592 (1189)
Q Consensus 513 alC~~~~~~~~~~~~~~~~~~~sp~e~alv~~a~~~g~~~~~r~~~~~~v~~~~~~~~~~~~~~~~il~~~~F~s~rkrm 592 (1189)
++||++.++.++..+.+ ...+||+|.|++.++++.|+ +.. ....+...+............|++++.+||+|+||||
T Consensus 419 alc~~~~~~~~~~~~~~-~~~g~p~E~Al~~~a~~~g~-~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~pF~s~rk~m 495 (995)
T 3ar4_A 419 ALCNDSSLDFNETKGVY-EKVGEATETALTTLVEKMNV-FNT-EVRNLSKVERANACNSVIRQLMKKEFTLEFSRDRKSM 495 (995)
T ss_dssp HHSCCCEEEEETTTTEE-EEESCHHHHHHHHHHHHHCT-TCC-CCTTSCTTTSTTHHHHHHHHHEEEEEEEEEETTTTEE
T ss_pred HHcCCCcccccCCCCce-eecCCccHHHHHHHHHHcCC-ccc-cccccccccccccchhhhhhhCceEEEeecCCCCCee
Confidence 99999876544333322 23589999999999999887 211 1000000000000000123579999999999999999
Q ss_pred EEEEEeCCC-----eEEEEEecCchHHHHHhhhc---------chhhHHHHHHHHHHH--HhccCeEEEEEEEecCHHHH
Q 001017 593 SVIVRSEEG-----TLLLLSKGADSVMFERLAEN---------GREFEEQTKEHINEY--ADAGLRTLILAYRELDEKEY 656 (1189)
Q Consensus 593 sviv~~~~~-----~~~l~~KGa~~~i~~~~~~~---------~~~~~~~~~~~l~~~--a~~Glr~l~~a~r~l~~~e~ 656 (1189)
||+++.++| +..+|+|||||.|+++|... +++.++.+.+++++| +++|+|||++|||+++.++.
T Consensus 496 svi~~~~~g~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~GlRvLa~A~k~~~~~~~ 575 (995)
T 3ar4_A 496 SVYCSPAKSSRAAVGNKMFVKGAPEGVIDRCNYVRVGTTRVPMTGPVKEKILSVIKEWGTGRDTLRCLALATRDTPPKRE 575 (995)
T ss_dssp EEEEEESSCCSCSCCCEEEEEECHHHHHHTEEEEEETTEEEECCHHHHHHHHHHHHHHHHSTTCCEEEEEEEESSCCCGG
T ss_pred EEEEecCCCCccccceEEEEcCCHHHHHHhcchhhcCCCcccCCHHHHHHHHHHHHHHHhhhccceEEEEEEEecCcccc
Confidence 999998766 68999999999999999642 234567788899999 99999999999999864210
Q ss_pred HHHHHHHHHHhhhhhhcHHHHHHHHHHHHhcCceEEEeeeecccCCCCcHHHHHHHHHcCCeEEEEcCCChhhHHHHHHH
Q 001017 657 KQFNEEFTEAKNSVSADREELAEEIAEKIEKNLILLGATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFA 736 (1189)
Q Consensus 657 ~~~~~~~~~a~~~~~~~~~~~~~~~~~~ie~~l~llG~~~ieD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~ 736 (1189)
...+ .+ ....+.+|+|++|+|+++++|++|++++++|+.|+++||++||+|||+..||.++|++
T Consensus 576 ----------~~~~-~~-----~~~~~~~e~~l~~lG~~~i~D~lr~~~~~~I~~l~~~Gi~v~miTGD~~~ta~~ia~~ 639 (995)
T 3ar4_A 576 ----------EMVL-DD-----SSRFMEYETDLTFVGVVGMLDPPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAICRR 639 (995)
T ss_dssp ----------GCCT-TC-----GGGHHHHTCSEEEEEEEEEECCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHH
T ss_pred ----------cccc-cc-----chhhhhhccCcEEEEEEeecCCCchhHHHHHHHHHHcCCEEEEECCCCHHHHHHHHHH
Confidence 0001 01 0134678999999999999999999999999999999999999999999999999999
Q ss_pred cCcccCCceEEEEeCCCCcccccchhhHHHHHHHHHHHhHHHHHhhhhhccccCCCCCCCeEEEEcCchhhhhhhHHHHH
Q 001017 737 CSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKD 816 (1189)
Q Consensus 737 ~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~ 816 (1189)
|||...+... . ..+++|+.+..+.++++.+
T Consensus 640 lgi~~~~~~i--------~------------------------------------------~~~~~g~~~~~l~~~~~~~ 669 (995)
T 3ar4_A 640 IGIFGENEEV--------A------------------------------------------DRAYTGREFDDLPLAEQRE 669 (995)
T ss_dssp HTSSCTTCCC--------T------------------------------------------TTEEEHHHHHTSCHHHHHH
T ss_pred cCcCCCCCcc--------c------------------------------------------ceEEEchhhhhCCHHHHHH
Confidence 9997543110 0 0156676666554444433
Q ss_pred HHHHHHhccceeEEEeCCcccHHHHHHHHHhcCCCeEEEEcCCCCChhhhhhcCeeEEecCCcchhhhhcccccccc--c
Q 001017 817 LFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQ--F 894 (1189)
Q Consensus 817 ~~~~~~~~~~~vv~~r~sP~qK~~iV~~l~~~~~~~vl~iGDG~ND~~ml~~A~vGI~i~g~~~~~a~~~sD~~i~~--f 894 (1189)
.+. +..+|||++|+||.++|+.+|+ .|+.|+|+|||.||++||++|||||||+ +....|+++||+++.+ |
T Consensus 670 ~~~------~~~v~~r~~P~~K~~~v~~l~~-~g~~v~~~GDG~ND~~alk~Advgiamg-~g~~~ak~aAd~vl~~~~~ 741 (995)
T 3ar4_A 670 ACR------RACCFARVEPSHKSKIVEYLQS-YDEITAMTGDGVNDAPALKKAEIGIAMG-SGTAVAKTASEMVLADDNF 741 (995)
T ss_dssp HHH------HCCEEESCCSSHHHHHHHHHHT-TTCCEEEEECSGGGHHHHHHSTEEEEET-TSCHHHHHTCSEEETTCCH
T ss_pred HHh------hCcEEEEeCHHHHHHHHHHHHH-CCCEEEEEcCCchhHHHHHHCCeEEEeC-CCCHHHHHhCCEEECCCCH
Confidence 332 3569999999999999999999 6999999999999999999999999995 4334489999999987 5
Q ss_pred hhhHHHHHHhhhhhhhhhhHhHHHHHHHHHHHHHHHHHHHhhcccccccchhhHHHHHHHHHHhhHHHHhhhhcccCCCh
Q 001017 895 RFLERLLLVHGHWCYRRISSMICYFFYKNIAFGFTLFFFEAYASFSGQPVYNDWFLSLYNVFFTSLPVIALGVFDQDVSA 974 (1189)
Q Consensus 895 ~~l~~lll~~GR~~~~~i~~~i~~~~~kni~~~~~~~~~~~~~~~sg~~~~~~~~~l~~n~i~~~lp~~~l~~~~~~~~~ 974 (1189)
..+..+ +.|||++|+|+++++.|.+++|+..+++.+++.++. + ..++.++|++|+|++++.+|+++++++++ .+
T Consensus 742 ~~i~~~-i~~GR~~~~~i~k~i~~~l~~Ni~~~~~~~~~~~~g-~--~~pl~~~qil~~nl~~d~~p~l~l~~~~~--~~ 815 (995)
T 3ar4_A 742 STIVAA-VEEGRAIYNNMKQFIRYLISSNVGEVVCIFLTAALG-L--PEALIPVQLLWVNLVTDGLPATALGFNPP--DL 815 (995)
T ss_dssp HHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-C--CCSSCHHHHHHHHHTTTHHHHHHHTTCCC--CT
T ss_pred HHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-C--cchHHHHHHHHHHHHHHHHHHHhhccCCC--Ch
Confidence 558887 899999999999999999999999988888887763 2 24688999999999999999999998754 34
Q ss_pred HHHhhCccchhccccccccchhhhhhhhhhhHHHHHHHHHHHHHhhc--ccc--cc-----------CCCcee-------
Q 001017 975 RFCLKFPLLYQEGVQNILFSWTRILGWALNGVANAAIIFFFCIHAMK--QQA--FR-----------KGGEVI------- 1032 (1189)
Q Consensus 975 ~~~~~~P~ly~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~--~~-----------~~g~~~------- 1032 (1189)
+.+.++|+ .+++.+++++.++.|++.|+++++++++.+++.+. ... .. .++..+
T Consensus 816 ~~m~~~P~----~~~~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 891 (995)
T 3ar4_A 816 DIMDRPPR----SPKEPLISGWLFFRYMAIGGYVGAATVGAAAWWFMYAEDGPGVTYHQLTHFMQCTEDHPHFEGLDCEI 891 (995)
T ss_dssp TGGGSCCC----CTTCCSSCHHHHHHHHHHHHHHHHHHHHHHHHHTSSCSSSCCCTTCCGGGCSSCSSCCSCCSCSCCCG
T ss_pred hHHhCCCC----CCcccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccchhcccccccccccccccccccc
Confidence 55556665 56678999999999999999999887654433221 100 00 000000
Q ss_pred -ehhhhhhHHHHHHHHHHHHHHHHh-ccc---c--hhhHHHHHHHHHHHHHHHHHHHhccCccccchhHHHHHHHhccCh
Q 001017 1033 -GLEILGTTMYTCVVWVVNCQMALS-VTY---F--TYIQHLFIWGGITFWYIFLLAYGAMDPYISTTAYKVFIEACAPAP 1105 (1189)
Q Consensus 1033 -~~~~~~~~~f~~~v~~~n~~~~l~-~~~---~--t~~~~~~i~~si~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 1105 (1189)
......|++|+++++++.++.+.. +.. | ..+.+..+++++++.+++++++.++|.. +. +|+..+.++
T Consensus 892 ~~~~~~~t~~f~~lv~~~~~~~~~~r~~~~~~~~~~~~~n~~l~~~~~~~~~l~~~~~~~p~~-~~-----~f~~~~l~~ 965 (995)
T 3ar4_A 892 FEAPEPMTMALSVLVTIEMCNALNSLSENQSLMRMPPWVNIWLLGSICLSMSLHFLILYVDPL-PM-----IFKLKALDL 965 (995)
T ss_dssp GGCHHHHHHHHHHHHHHHHHHHHTTSCSSCCTTTSCGGGCHHHHHHHHHHHHHHHHHHHSTHH-HH-----HTTCCCCCH
T ss_pred ccchhhhhHHHHHHHHHHHHHHHHhhccccchhccCCccCHHHHHHHHHHHHHHHHHHHHHHH-HH-----hhccCCCCH
Confidence 112357888998888877776532 111 1 2345666777777777777777777732 22 566778899
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 001017 1106 SFWLITLLVLMSSLLPYFTYSAIQMRF 1132 (1189)
Q Consensus 1106 ~~wl~~ll~~~~~l~~~~~~k~~~~~~ 1132 (1189)
.+|+.+++++++.++.+++.|+++|.|
T Consensus 966 ~~w~~~~~~~~~~~~~~e~~k~~~r~~ 992 (995)
T 3ar4_A 966 TQWLMVLKISLPVIGLDEILKFIARNY 992 (995)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcC
Confidence 999999999999999999999998865
No 3
>2zxe_A Na, K-ATPase alpha subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_A* 3b8e_A* 3kdp_A* 3n2f_A* 3n23_A* 1mo7_A 1mo8_A* 1q3i_A
Probab=100.00 E-value=4.3e-105 Score=1035.88 Aligned_cols=879 Identities=18% Similarity=0.193 Sum_probs=675.3
Q ss_pred hhhcccCCCCceEecCCC-cchhhhHHHHHHHHHHHHHHHHHHHHHhccccC--C---C----CCCccchhhhhhHHHHH
Q 001017 48 FEASVLNYSGNYVRTTKY-TLATFFPKALFEQFRRVANVYFLICAILSFTPL--S---P----YSAVSNVLPLVVVIGAT 117 (1189)
Q Consensus 48 ~~~~~~~~g~N~i~~~k~-~~~~flp~~l~~qf~~~~~~~fl~~~il~~~~~--~---~----~~~~~~~~~l~~vl~~s 117 (1189)
.++|+++||+|.++.++. ++| +.+++||.++++++++++++++++.+ . . .+.+...++++++++++
T Consensus 73 ~~~r~~~~G~N~l~~~~~~~~~----~~~~~~~~~~~~~iL~~aa~ls~~~~~~~~~~~~~~~~~~~~~~~~i~~vv~i~ 148 (1028)
T 2zxe_A 73 AKEILARDGPNSLTPPPTTPEW----IKFCRQLFGGFSILLWIGAILCFLAYGIQAATEDEPANDNLYLGVVLSTVVIVT 148 (1028)
T ss_dssp HHHHHHHHCCSCCCCCCCCCHH----HHHHTTTTSTHHHHHHHHHHHHHHHHHHHHHSSCCCCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhcCCCCCCCCCCCCHH----HHHHHHHHhHHHHHHHHHHHHHHHHHHhhcccccccccchHHHHHHHHHHHHHH
Confidence 367889999999998864 444 78999999999999999999988641 1 0 12345567788899999
Q ss_pred hhHHHHHHHHHhhhhHHHh---cceEEEEecCCeEEEeecccCccccEEEeccCCcCCccEEEeecccCCceEEEEecCC
Q 001017 118 MGKEVLEDWRRKKQDIEVN---NRKVKVHCGEGAFDYTKWRDLKVGDVVKVEKDEFFPADLILLSSSYEEAICYVETTNL 194 (1189)
Q Consensus 118 ~i~~~~~d~~~~~~~~~~n---~~~~~v~~r~g~~~~i~~~~l~vGDII~l~~ge~iPaD~vlL~~s~~~g~~~Vd~s~L 194 (1189)
++.++++++|++++.+.+. +.+++|+ |||++++|++++|+|||||.|++||.|||||+|++|++ |+||||+|
T Consensus 149 ~~~~~~qe~ka~~~~~~L~~l~~~~a~V~-Rdg~~~~I~~~~Lv~GDiV~l~~Gd~IPaD~~ll~g~~----~~VdeS~L 223 (1028)
T 2zxe_A 149 GCFSYYQEAKSSRIMDSFKNMVPQQALVI-RDGEKSTINAEFVVAGDLVEVKGGDRIPADLRIISAHG----CKVDNSSL 223 (1028)
T ss_dssp HHHHHHHTCCCCCHHHHHHTTSCSEEEEE-ETTEEEEEEGGGCCTTCEEEEETTCBCCSEEEEEEEEE----EEEECHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhhCCCeeEEE-ECCEEEEEEHHHCCcCCEEEECCCCEeeceEEEEeeCc----EEEEcCcc
Confidence 9999999998888876554 6899999 99999999999999999999999999999999999975 99999999
Q ss_pred CCCCcceecccccccccCCCccccccceEEEEeecCCCCceeeEEEEEEcCccccCCCCcccccCceeecCCeEEEEEEE
Q 001017 195 DGETNLKLKQALDATSNMHEDSNFQNFKAIIRCEDPNANLYTFVGSLELEEQQYPLTPQQLLLRDSKLRNTDCIYGAVIF 274 (1189)
Q Consensus 195 tGEs~~~~K~~~~~~~~~~~~~~~~~~~~~i~~e~pn~~~~~f~Gt~~~~g~~~~l~~~n~l~rgs~l~nt~~~~gvVv~ 274 (1189)
||||.|+.|.+++.. ..|++.+|++++||.+.+ |+++|+|++
T Consensus 224 TGES~pv~K~~~~~~-------------------------------------~~~~~~~n~v~~GT~v~~-G~~~~~V~~ 265 (1028)
T 2zxe_A 224 TGESEPQTRSPEFSS-------------------------------------ENPLETRNIAFFSTNCVE-GTARGVVVY 265 (1028)
T ss_dssp HSCCSCEECCSSCCC-------------------------------------SSTTTCSSEECTTCEEEE-EEEEEEEEE
T ss_pred CCCCcceecccCCCC-------------------------------------CCcccccceEEeCceEEc-ceEEEEEEE
Confidence 999999999886432 014566788888888886 679999999
Q ss_pred eccccce---eccCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCcccccccccCCCCCCccCch
Q 001017 275 TGRDTKV---FQNSTGPPSKRSKVERRMDKIIYFLFGILVLMSFIGSIFFGIATREDLQDGKMKRWYLRPDDTTAYYDPK 351 (1189)
Q Consensus 275 tG~~Tk~---~~~~~~~~~k~s~l~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 351 (1189)
||.+|++ +++...++.+++++++.+++++.+++.+.+++|++.+++..+ ... .|+
T Consensus 266 tG~~T~~g~i~~~~~~~~~~~t~lq~~~~~~~~~l~~~~l~~~~~~~~~~~~-~~~--------~~~------------- 323 (1028)
T 2zxe_A 266 TGDRTVMGRIATLASGLEVGRTPIAIEIEHFIHIITGVAVFLGVSFFILSLI-LGY--------SWL------------- 323 (1028)
T ss_dssp CGGGSHHHHHHHHHHHSCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-TTC--------CHH-------------
T ss_pred eccccHHHHHHHhccCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-ccC--------cHH-------------
Confidence 9999965 445566788899999999999999999999888887766432 210 221
Q ss_pred hhHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHhccccccccccCCcccccCcchhhhccCeeEEEeCCCccc
Q 001017 352 RAAVAAVLHFLTALMLYGYLIPISLYVSIEIVKILQSIFINQDLHMYYEETDKPARARTSNLNEELGQVDTILSDKTGTL 431 (1189)
Q Consensus 352 ~~~~~~~~~~~~~l~l~~~~iP~~L~v~l~~~~~~~~~~i~~d~~m~~~~~~~~i~~~~~~~~E~Lg~v~~i~~DKTGTL 431 (1189)
..+..++.+++.+||++||++++++.++++.+| +++++++|+++++|+||++++|||||||||
T Consensus 324 -------~~~~~~i~llv~~iP~~Lp~~vti~l~~~~~~m----------ak~~ilvk~~~avE~Lg~v~~Ic~DKTGTL 386 (1028)
T 2zxe_A 324 -------EAVIFLIGIIVANVPEGLLATVTVCLTLTAKRM----------ARKNCLVKNLEAVETLGSTSTICSDKTGTL 386 (1028)
T ss_dssp -------HHHHHHHHHHHHHSCTTHHHHHHHHHHHHHHHH----------HTTTEEESSTTHHHHHHHCCEEEECCCCCC
T ss_pred -------HHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHH----------hhCCceeccchHhhhhcCceEEeccCCCCC
Confidence 245666778888999999999999999999998 889999999999999999999999999999
Q ss_pred cccceEEEEEEEcCeecCCCchHHHHHHHHhcCCCCccchhhhhccccccCCCCcCChhhhcCCCCCCCchHHHHHHHHH
Q 001017 432 TCNSMEFIKCSIAGTSYGRGVTEVERAMARRKGSPLEEEVTEEQEDKASIKGFNFEDERIMNGSWVNEPHADVIQKFLRL 511 (1189)
Q Consensus 432 T~n~m~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 511 (1189)
|+|+|+|.++++++..|.....+ . ..+.. .+......+.++.+
T Consensus 387 T~n~m~v~~~~~~~~~~~~~~~~-----------~--------------~~~~~------------~~~~~~~~~~l~~~ 429 (1028)
T 2zxe_A 387 TQNRMTVAHMWFDNQIHEADTTE-----------N--------------QSGAA------------FDKTSATWSALSRI 429 (1028)
T ss_dssp BCSSCEEEEEEETTEEEECCCCT-----------T--------------CCSCC------------CCSSCHHHHHHHHH
T ss_pred CCCeEEEEEEEECCeeeeccCCC-----------C--------------ccccc------------cccCCHHHHHHHHH
Confidence 99999999999988765321100 0 00000 01122345678899
Q ss_pred HhhhcceeccccCCCCc--EEEEcCChhHHHHHHHHHHCCcEEEEecCceeEEEecCCCCCcceeEEEEEeeeecCCCCC
Q 001017 512 LAICHTALPEVDEENGK--ISYEAESPDEAAFVIAARELGFEFYERTQTSISVHELDPVTGTKVERSYSLLNVLEFSSSR 589 (1189)
Q Consensus 512 lalC~~~~~~~~~~~~~--~~~~~~sp~e~alv~~a~~~g~~~~~r~~~~~~v~~~~~~~~~~~~~~~~il~~~~F~s~r 589 (1189)
+++||++..+.+++... ..+..+||+|.||++++++.|.... +.+..|++++.+||+|+|
T Consensus 430 ~alc~~~~~~~~~~~hp~~~~~~~gdp~E~Al~~~a~~~~~~~~------------------~~~~~~~~~~~~pF~s~r 491 (1028)
T 2zxe_A 430 AALCNRAVFQAGQDNVPILKRSVAGDASESALLKCIELCCGSVQ------------------GMRDRNPKIVEIPFNSTN 491 (1028)
T ss_dssp HHHSCCCEECTTCTTSCGGGSCEESCHHHHHHHHHHHHHHSCHH------------------HHHHHSCEEEEECCCTTT
T ss_pred HHhcCCCeeecCCCCCccccceeCCCchHHHHHHHHHHhCCCHH------------------HHHHhCceEEEeccCccc
Confidence 99999987754321110 1123589999999999987632110 112467889999999999
Q ss_pred ceEEEEEEeC---CCeEEEEEecCchHHHHHhhhc---------chhhHHHHHHHHHHHHhccCeEEEEEEEecCHHHHH
Q 001017 590 KRMSVIVRSE---EGTLLLLSKGADSVMFERLAEN---------GREFEEQTKEHINEYADAGLRTLILAYRELDEKEYK 657 (1189)
Q Consensus 590 krmsviv~~~---~~~~~l~~KGa~~~i~~~~~~~---------~~~~~~~~~~~l~~~a~~Glr~l~~a~r~l~~~e~~ 657 (1189)
|||+++++.+ ++++++|+|||||.|+++|... +++.++.+.+++++++++|+|||++|+|+++++++.
T Consensus 492 k~msvi~~~~~~~~~~~~~~~KGA~e~il~~c~~~~~~g~~~~l~~~~~~~~~~~~~~~a~~G~RvL~~A~~~l~~~~~~ 571 (1028)
T 2zxe_A 492 KYQLSIHENEKSSESRYLLVMKGAPERILDRCSTILLNGAEEPLKEDMKEAFQNAYLELGGLGERVLGFCHFALPEDKYN 571 (1028)
T ss_dssp CEEEEEEECSCTTTCCEEEEEEECHHHHHTTEEEECBTTBCCBCCHHHHHHHHHHHHHHHHTTCEEEEEEEEECCSTTSC
T ss_pred ceEEEEEeccCCCCCcEEEEEeCCcHHHHHHhhhhhcCCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEEEEecCccccc
Confidence 9999999974 5788999999999999999642 234567888999999999999999999999765432
Q ss_pred HHHHHHHHHhhhhhhcHHHHHHHHHHHHhcCceEEEeeeecccCCCCcHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHc
Q 001017 658 QFNEEFTEAKNSVSADREELAEEIAEKIEKNLILLGATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFAC 737 (1189)
Q Consensus 658 ~~~~~~~~a~~~~~~~~~~~~~~~~~~ie~~l~llG~~~ieD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~ 737 (1189)
++. . .+++ ..+.+|+|++|+|+++++||+|++++++|++|+++||++||+|||+.+||.++|++|
T Consensus 572 ~~~--------~--~~~~-----~~~~~e~~l~~lG~i~i~Dplr~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~l 636 (1028)
T 2zxe_A 572 EGY--------P--FDAD-----EPNFPTTDLCFVGLMAMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKGV 636 (1028)
T ss_dssp TTC--------C--CCTT-----TTCSCCSSEEEEEEEEEECCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHH
T ss_pred ccc--------c--cchh-----hhhhhhcCeEEEeeeccCCCCChhHHHHHHHHHHcCCEEEEECCCCHHHHHHHHHHc
Confidence 110 0 0010 012357899999999999999999999999999999999999999999999999999
Q ss_pred CcccCCceEEEEeCCCCcccccchhhHHHHHHHHHHHhHHHHHhhhhhccccCCCCCCCeEEEEcCchhhhhhhHHHHHH
Q 001017 738 SLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDL 817 (1189)
Q Consensus 738 gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~ 817 (1189)
||..++...+ . . ...+... .+... ........+++|..+..+.++++.
T Consensus 637 gi~~~~~~~i------------~------~--------~~~~~~~---~~~~~-~~~~~~~~vi~G~~l~~~~~~~l~-- 684 (1028)
T 2zxe_A 637 GIISEGNETI------------E------D--------IAARLNI---PIGQV-NPRDAKACVVHGSDLKDLSTEVLD-- 684 (1028)
T ss_dssp TSSCTTCCCH------------H------H--------HHHHTTC---CGGGS-CGGGCCEEEEEHHHHTTCCHHHHH--
T ss_pred CCCCCCchhH------------H------H--------HHhhcCc---chhhc-cccccceEEEEcHHhhhCCHHHHH--
Confidence 9975443210 0 0 0000000 00000 011234678999999876654443
Q ss_pred HHHHHhccceeEEEeCCcccHHHHHHHHHhcCCCeEEEEcCCCCChhhhhhcCeeEEecCCcchhhhhcccccccc--ch
Q 001017 818 FLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQ--FR 895 (1189)
Q Consensus 818 ~~~~~~~~~~vv~~r~sP~qK~~iV~~l~~~~~~~vl~iGDG~ND~~ml~~A~vGI~i~g~~~~~a~~~sD~~i~~--f~ 895 (1189)
++...++.++|||++|+||..+|+.+|+ .|++|+|+|||.||++||++|||||||+.+....|+++||+++.+ |+
T Consensus 685 --~~~~~~~~~v~ar~~P~~K~~iV~~lq~-~g~~V~~iGDG~ND~paLk~AdvGIAmg~~gtd~ak~aAD~Vl~~~~~~ 761 (1028)
T 2zxe_A 685 --DILHYHTEIVFARTSPQQKLIIVEGCQR-QGAIVAVTGDGVNDSPALKKADIGVAMGISGSDVSKQAADMILLDDNFA 761 (1028)
T ss_dssp --HHHHHCSEEEEESCCHHHHHHHHHHHHH-TTCCEEEEECSGGGHHHHHHSSEEEEESSSCCHHHHHHCSEEETTCCTH
T ss_pred --HHHhhCCcEEEEEcCHHHHHHHHHHHHh-CCCEEEEEcCCcchHHHHHhCCceEEeCCccCHHHHHhcCEEecCCCHH
Confidence 3444566789999999999999999998 789999999999999999999999999633444489999999987 55
Q ss_pred hhHHHHHHhhhhhhhhhhHhHHHHHHHHHHHHHHHHHHHhhcccccccchhhHHHHHHHHHHhhHHHHhhhhcccCCChH
Q 001017 896 FLERLLLVHGHWCYRRISSMICYFFYKNIAFGFTLFFFEAYASFSGQPVYNDWFLSLYNVFFTSLPVIALGVFDQDVSAR 975 (1189)
Q Consensus 896 ~l~~lll~~GR~~~~~i~~~i~~~~~kni~~~~~~~~~~~~~~~sg~~~~~~~~~l~~n~i~~~lp~~~l~~~~~~~~~~ 975 (1189)
.+.++ +.|||++|+|+++++.|.+++|+..+++.+++.++. ...++++++++|+|++++.+|+++++... +.++
T Consensus 762 ~I~~~-i~~gR~i~~ni~k~i~~~l~~n~~~~~~~~~~~~~~---~~~~l~~~qil~inl~~d~~pa~al~~e~--~~~~ 835 (1028)
T 2zxe_A 762 SIVTG-VEEGRLIFDNLKKSIAYTLTSNIPEITPFLVFIIGN---VPLPLGTVTILCIDLGTDMVPAISLAYEQ--AESD 835 (1028)
T ss_dssp HHHHH-HHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHC---CCCSSCHHHHHHHHTTTTHHHHHHGGGCC--CSSC
T ss_pred HHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc---ccchhHHHHHHHHHHHHHHHHHHHhccCc--cchh
Confidence 58888 899999999999999999999999988888887764 23458999999999999999999998643 3344
Q ss_pred HHhhCccchhccccccccchhhhhh-hhhhhHHHHHHHHHHHHHhhcc-cc------------cc--------CCCceee
Q 001017 976 FCLKFPLLYQEGVQNILFSWTRILG-WALNGVANAAIIFFFCIHAMKQ-QA------------FR--------KGGEVIG 1033 (1189)
Q Consensus 976 ~~~~~P~ly~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-~~------------~~--------~~g~~~~ 1033 (1189)
.+.+.|+ .++.+++++++.++. |+..|++++++.|+.+++.+.. +. +. ..|....
T Consensus 836 ~m~~~Pr---~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 912 (1028)
T 2zxe_A 836 IMKRQPR---NPKTDKLVNERLISMAYGQIGMIQALGGFFSYFVILAENGFLPMDLIGKRVRWDDRWISDVEDSFGQQWT 912 (1028)
T ss_dssp GGGSCCC---CTTTCCSSCHHHHHHHTTTHHHHHHHHHHHHHHHHHHHTTCCHHHHTTCHHHHSCTTCCCEECTTSCEEC
T ss_pred hhccCCC---CcccccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcccchhhcccchhccccccccccccccccc
Confidence 4555564 223348999988766 6788999999888766553321 10 00 0111110
Q ss_pred -------hhhhhhHHHHHHHHHHHHHHHH-hcccchh----hHHHHHHHHHHHHHHHHHHHhccCccccchhHHHHHHHh
Q 001017 1034 -------LEILGTTMYTCVVWVVNCQMAL-SVTYFTY----IQHLFIWGGITFWYIFLLAYGAMDPYISTTAYKVFIEAC 1101 (1189)
Q Consensus 1034 -------~~~~~~~~f~~~v~~~n~~~~l-~~~~~t~----~~~~~i~~si~~~~i~~~i~~~~~~~~~~~~~~~~~~~~ 1101 (1189)
.....|++|+++++.+.+..+. +++..++ +.+..+++++++.+++++++.++|+. +. +|+..
T Consensus 913 ~~~~~~~~~~~~T~~f~~~v~~q~~~~~~~r~~~~~~~~~~~~n~~l~~~~~~~~~l~~~~~~~p~~-~~-----~f~~~ 986 (1028)
T 2zxe_A 913 YEQRKIVEFTCHTSFFISIVVVQWADLIICKTRRNSIFQQGMKNKILIFGLFEETALAAFLSYCPGT-DV-----ALRMY 986 (1028)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSSSCHHHHCSCCHHHHHHHHHHHHHHHHHHHSTTH-HH-----HTCCC
T ss_pred hhhhhhhhhHHHHHHHHHHHHHHHHHHHHHccCCcchhccCCcCHHHHHHHHHHHHHHHHHHHhhhH-Hh-----hhcCC
Confidence 1246789999999888777653 3333322 34667888888888888888888853 22 56677
Q ss_pred ccChHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 001017 1102 APAPSFWLITLLVLMSSLLPYFTYSAIQMRF 1132 (1189)
Q Consensus 1102 ~~~~~~wl~~ll~~~~~l~~~~~~k~~~~~~ 1132 (1189)
++++..|+.++.++++.++.+++.|++.|.+
T Consensus 987 ~l~~~~w~~~~~~~~~~~~~~e~~k~~~r~~ 1017 (1028)
T 2zxe_A 987 PLKPSWWFCAFPYSLIIFLYDEMRRFIIRRS 1017 (1028)
T ss_dssp CCCGGGGGTTHHHHHHHHHHHHHHHHHHHHC
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHcc
Confidence 8899999999999999999999999987765
No 4
>1mhs_A Proton pump, plasma membrane ATPase; ION transport, membrane protein, P-type ATPase, active transport, cryo-electron microscopy; 8.00A {Neurospora crassa} SCOP: i.18.1.1
Probab=100.00 E-value=8.8e-98 Score=940.78 Aligned_cols=774 Identities=17% Similarity=0.169 Sum_probs=588.9
Q ss_pred hhhcccCCCCceEecCCCcchhhhHHHHHHHHHHHHHHHHHHHHHhccccCCCCCCccchhhhhhHHHHHhhHHHHHHHH
Q 001017 48 FEASVLNYSGNYVRTTKYTLATFFPKALFEQFRRVANVYFLICAILSFTPLSPYSAVSNVLPLVVVIGATMGKEVLEDWR 127 (1189)
Q Consensus 48 ~~~~~~~~g~N~i~~~k~~~~~flp~~l~~qf~~~~~~~fl~~~il~~~~~~~~~~~~~~~~l~~vl~~s~i~~~~~d~~ 127 (1189)
.++|+++||+|.++.+++++| +.|++||..+++++++++++++++ .+.|...+.++++++++++.+++++++
T Consensus 93 a~~r~~~~G~N~l~~~~~~~~----~~~l~~f~~~~~~ll~~aai~s~~----~g~~~~~~~i~~vv~i~~~i~~~qe~~ 164 (920)
T 1mhs_A 93 VVQRRRKYGLNQMKEEKENHF----LKFLGFFVGPIQFVMEGAAVLAAG----LEDWVDFGVICGLLLLNAVVGFVQEFQ 164 (920)
T ss_dssp HHHHHHHTSSSSCCCCCCSSH----HHHTHHHHHHHHHHHHHHHHHCTT----CSCSSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhcCCCccCCCCCCHH----HHHHHHHHHHHHHHHHHHHHHHHH----HHhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 467888999999999998877 678899999999999999999988 556666677778888999999999999
Q ss_pred HhhhhHHHh---cceEEEEecCCeEEEeecccCccccEEEeccCCcCCccEEEeecccCCceEEEEecCCCCCCcceecc
Q 001017 128 RKKQDIEVN---NRKVKVHCGEGAFDYTKWRDLKVGDVVKVEKDEFFPADLILLSSSYEEAICYVETTNLDGETNLKLKQ 204 (1189)
Q Consensus 128 ~~~~~~~~n---~~~~~v~~r~g~~~~i~~~~l~vGDII~l~~ge~iPaD~vlL~~s~~~g~~~Vd~s~LtGEs~~~~K~ 204 (1189)
++++.+.++ +.+++|+ |||++++|++++|+|||||.|++||.|||||+|++|++. +.||||+|||||.|+.|.
T Consensus 165 a~~a~~~L~~l~~~~a~V~-RdG~~~~I~~~eLv~GDiV~l~~Gd~VPaDg~ll~g~~~---l~VDES~LTGES~PV~K~ 240 (920)
T 1mhs_A 165 AGSIVDELKKTLALKAVVL-RDGTLKEIEAPEVVPGDILQVEEGTIIPADGRIVTDDAF---LQVDQSALTGESLAVDKH 240 (920)
T ss_dssp HHHHHHTTTTCCCSSCEEE-CSSSEEECCTTTSCTTSEEEECTTCBCSSEEEEEEESSC---CEEBCTTTSSCCCCEECC
T ss_pred HHHHHHHhhccCCCEEEEE-ECCEEEEEEHHHcCCCCEEEeCCCCccccceEEEecCce---eeeeccccCCCCcceEec
Confidence 998877765 5789999 999999999999999999999999999999999999711 699999999999999998
Q ss_pred cccccccCCCccccccceEEEEeecCCCCceeeEEEEEEcCccccCCCCcccccCceeecCCeEEEEEEEeccccceecc
Q 001017 205 ALDATSNMHEDSNFQNFKAIIRCEDPNANLYTFVGSLELEEQQYPLTPQQLLLRDSKLRNTDCIYGAVIFTGRDTKVFQN 284 (1189)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~i~~e~pn~~~~~f~Gt~~~~g~~~~l~~~n~l~rgs~l~nt~~~~gvVv~tG~~Tk~~~~ 284 (1189)
+++. .|+||++.+|. ++++|++||.+|++++.
T Consensus 241 ~gd~---------------------------v~sGT~v~~G~---------------------~~~~V~~tG~~T~~g~I 272 (920)
T 1mhs_A 241 KGDQ---------------------------VFASSAVKRGE---------------------AFVVITATGDNTFVGRA 272 (920)
T ss_dssp SSCE---------------------------ECSCBCCSCCC---------------------EEEEEEECSTTCSTTTT
T ss_pred CCCe---------------------------eecCceEecce---------------------EEEEEEEeCCcCHHHHH
Confidence 8643 37787777776 99999999999977654
Q ss_pred ---CCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCcccccccccCCCCCCccCchhhHHHHHHHH
Q 001017 285 ---STGPPSKRSKVERRMDKIIYFLFGILVLMSFIGSIFFGIATREDLQDGKMKRWYLRPDDTTAYYDPKRAAVAAVLHF 361 (1189)
Q Consensus 285 ---~~~~~~k~s~l~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 361 (1189)
...++.+++++++.++++..+++++.++++++.++.+.+ .. . . +...+
T Consensus 273 ~~lv~~a~~~~~~l~~~~~~i~~~l~~~~~~~~~i~~~~~~~-~~-~-------~--------------------~~~~l 323 (920)
T 1mhs_A 273 AALVNAASGGSGHFTEVLNGIGTILLILVIFTLLIVWVSSFY-RS-N-------P--------------------IVQIL 323 (920)
T ss_dssp TSSCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTT-TT-C-------C--------------------HHHHH
T ss_pred HHHHhhcccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cC-C-------c--------------------HHHHH
Confidence 445667889999999999998887777766655433211 00 0 1 12366
Q ss_pred HHHHHHHhccccchhHHHHHHHHHHHHHHHhccccccccccCCcccccCcchhhhccCeeEEEeCCCccccccceEEEEE
Q 001017 362 LTALMLYGYLIPISLYVSIEIVKILQSIFINQDLHMYYEETDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKC 441 (1189)
Q Consensus 362 ~~~l~l~~~~iP~~L~v~l~~~~~~~~~~i~~d~~m~~~~~~~~i~~~~~~~~E~Lg~v~~i~~DKTGTLT~n~m~~~~~ 441 (1189)
..++++++.+|||+||++++++.+.++.++ +++++++|+++.+|+||++++||||||||||+|+|++.++
T Consensus 324 ~~av~llV~aiP~aLp~~vti~la~g~~~m----------ak~~ilvk~~~aiE~Lg~v~vIc~DKTGTLT~n~m~v~~~ 393 (920)
T 1mhs_A 324 EFTLAITIIGVPVGLPAVVTTTMAVGAAYL----------AKKKAIVQKLSAIESLAGVEILCSDKTGTLTKNKLSLHDP 393 (920)
T ss_dssp HHHHHHHHHHSCCCHHHHHHHHHHHHHHHH----------HHTTCCCCCTTTHHHHHTCCEEEEETBTTTBSSCSCCCCC
T ss_pred HHHHHHHHHhCchhHHHHHHHHHHHHHHHH----------HhCCeEEecCchhhhhccCcEEEECCCCCccccceeEEEE
Confidence 778889999999999999999999999998 7899999999999999999999999999999999999876
Q ss_pred EEcCeecCCCchHHHHHHHHhcCCCCccchhhhhccccccCCCCcCChhhhcCCCCCCCchHHHHHHHHHHhhhcceecc
Q 001017 442 SIAGTSYGRGVTEVERAMARRKGSPLEEEVTEEQEDKASIKGFNFEDERIMNGSWVNEPHADVIQKFLRLLAICHTALPE 521 (1189)
Q Consensus 442 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~lalC~~~~~~ 521 (1189)
+..+. +. + .+++.+.++|+....
T Consensus 394 ~~~~g-~~--------------------------------------------------~-----~~ll~~a~l~~~~~~- 416 (920)
T 1mhs_A 394 YTVAG-VD--------------------------------------------------P-----EDLMLTACLAASRKK- 416 (920)
T ss_dssp BCCSC-CC--------------------------------------------------C-----THHHHHHHHSCCCSS-
T ss_pred eecCC-CC--------------------------------------------------H-----HHHHHHHHHhcCCcc-
Confidence 43210 00 0 134556677765311
Q ss_pred ccCCCCcEEEEcCChhHHHHHHHHHHCCcEEEEecCceeEEEecCCCCCcceeEEEEEeeeecCCCCCceEEEEEEeCCC
Q 001017 522 VDEENGKISYEAESPDEAAFVIAARELGFEFYERTQTSISVHELDPVTGTKVERSYSLLNVLEFSSSRKRMSVIVRSEEG 601 (1189)
Q Consensus 522 ~~~~~~~~~~~~~sp~e~alv~~a~~~g~~~~~r~~~~~~v~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~ 601 (1189)
.++||.|.|+++++++.+... .....|++++.+||+|.||||+++++.++|
T Consensus 417 ----------~~~~P~e~Al~~~~~~~~~~~-------------------~~~~~~~~~~~~pF~s~~k~ms~iv~~~~g 467 (920)
T 1mhs_A 417 ----------KGIDAIDKAFLKSLKYYPRAK-------------------SVLSKYKVLQFHPFDPVSKKVVAVVESPQG 467 (920)
T ss_dssp ----------CSCCSHHHHHHHHHHHSSSCC-------------------GGGSCCCEEEEEEEETTTTEEEEEECCSSS
T ss_pred ----------cCCChHHHHHHHHHHhcccch-------------------hhccccceeEEeeccCCCCeEEEEEEeCCC
Confidence 024999999999998765310 012457889999999999999999998888
Q ss_pred eEEEEEecCchHHHHHhhhc---chhhHHHHHHHHHHHHhccCeEEEEEEEecCHHHHHHHHHHHHHHhhhhhhcHHHHH
Q 001017 602 TLLLLSKGADSVMFERLAEN---GREFEEQTKEHINEYADAGLRTLILAYRELDEKEYKQFNEEFTEAKNSVSADREELA 678 (1189)
Q Consensus 602 ~~~l~~KGa~~~i~~~~~~~---~~~~~~~~~~~l~~~a~~Glr~l~~a~r~l~~~e~~~~~~~~~~a~~~~~~~~~~~~ 678 (1189)
+.++|+||||+.|+++|... +++.++.+.+++++++.+|+|||++|+|..
T Consensus 468 ~~~~~~KGape~il~~c~~~~~~~~~~~~~~~~~~~~~a~~G~RvL~vA~~~~--------------------------- 520 (920)
T 1mhs_A 468 ERITCVKGAPLFVLKTVEEDHPIPEEVDQAYKNKVAEFATRGFRSLGVARKRG--------------------------- 520 (920)
T ss_dssp SCEEEEEECHHHHHHHCCCSSCCCHHHHHHHHHHHHHHHTSSCCCCEECCCSS---------------------------
T ss_pred cEEEEEeCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHhCCCEEEEEEEecc---------------------------
Confidence 88999999999999999752 334567788899999999999999998731
Q ss_pred HHHHHHHhcCceEEEeeeecccCCCCcHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcccCCceEEEEeCCCCcccc
Q 001017 679 EEIAEKIEKNLILLGATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKT 758 (1189)
Q Consensus 679 ~~~~~~ie~~l~llG~~~ieD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~ 758 (1189)
|.+++|+|+++++||+|++++++|+.|+++||++||+|||+..||.+||++|||.... ++.+.
T Consensus 521 -------e~~l~~lGli~i~Dp~R~ea~~aI~~l~~aGI~v~MiTGD~~~TA~aIA~~lGI~~~~-----~~~~~----- 583 (920)
T 1mhs_A 521 -------EGSWEILGIMPCMDPPRHDTYKTVCEAKTLGLSIKMLTGDAVGIARETSRQLGLGTNI-----YNAER----- 583 (920)
T ss_dssp -------SCSCCCCBBCCCCCCCCHHHHHHHHHHHHHTCEEEEEESSCHHHHHHHHHHHTSSCSC-----CCSSS-----
T ss_pred -------ccccEEEEEEEEeccccccHHHHHHHHhhcCceEEEEcCCCHHHHHHHHHHcCCCccc-----cCccc-----
Confidence 3789999999999999999999999999999999999999999999999999996421 00000
Q ss_pred cchhhHHHHHHHHHHHhHHHHHhhhhhccccCCCCCCCeEEEEcCchhhhhhhHHHHHHHHHHHhccceeEEEeCCcccH
Q 001017 759 LEKSEDKSAAAAALKASVLHQLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQK 838 (1189)
Q Consensus 759 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~~~~~~~~vv~~r~sP~qK 838 (1189)
++++|. ..+.++++.+ ... +..+|+|++|+||
T Consensus 584 ----------------------------------------~~~~g~--~~~~~~el~~----~~~--~~~V~arv~P~~K 615 (920)
T 1mhs_A 584 ----------------------------------------LGLGGG--GDMPGSEVYD----FVE--AADGFAEVFPQHK 615 (920)
T ss_dssp ----------------------------------------SSSCBC--CCGGGGGGGT----TTT--TTSCEESCCSTHH
T ss_pred ----------------------------------------eeecCc--ccCCHHHHHH----HHh--hCeEEEEeCHHHH
Confidence 001111 0000111111 111 2349999999999
Q ss_pred HHHHHHHHhcCCCeEEEEcCCCCChhhhhhcCeeEEecCCcchhhhhcccccccc--chhhHHHHHHhhhhhhhhhhHhH
Q 001017 839 ALVTRLVKTKTSSTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQ--FRFLERLLLVHGHWCYRRISSMI 916 (1189)
Q Consensus 839 ~~iV~~l~~~~~~~vl~iGDG~ND~~ml~~A~vGI~i~g~~~~~a~~~sD~~i~~--f~~l~~lll~~GR~~~~~i~~~i 916 (1189)
.++|+.+|+ .|+.|+|+|||.||+|||++|||||||++ ..+.|+++||+++.+ |..+..+ +.+||++|+|+++++
T Consensus 616 ~~iV~~Lq~-~g~~Vam~GDGvNDapaLk~AdvGIAmg~-gtd~ak~aADiVl~~~~~~~I~~a-i~~gR~~~~ni~k~i 692 (920)
T 1mhs_A 616 YNVVEILQQ-RGYLVAMTGDGVNDAPSLKKADTGIAVEG-SSDAARSAADIVFLAPGLGAIIDA-LKTSRQIFHRMYAYV 692 (920)
T ss_dssp HHHHHHHHT-TTCCCEECCCCGGGHHHHHHSSEEEEETT-SCHHHHHSSSEEESSCCSHHHHHH-HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHh-CCCeEEEEcCCcccHHHHHhCCcCccccc-ccHHHHHhcCeEEcCCCHHHHHHH-HHHHHHHHHHHHHHH
Confidence 999999998 69999999999999999999999999963 344589999999987 4458887 899999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhcccccccchhhHHHHHHHHHHhhHHHHhhhhcccCCChHHHhhCccchhccccccccchh
Q 001017 917 CYFFYKNIAFGFTLFFFEAYASFSGQPVYNDWFLSLYNVFFTSLPVIALGVFDQDVSARFCLKFPLLYQEGVQNILFSWT 996 (1189)
Q Consensus 917 ~~~~~kni~~~~~~~~~~~~~~~sg~~~~~~~~~l~~n~i~~~lp~~~l~~~~~~~~~~~~~~~P~ly~~~~~~~~~~~~ 996 (1189)
.|.++.|+.+....+++..+.++ + +++.+++|.|++.+. |++++++++.+++ +.|+ .++ ..+
T Consensus 693 ~~~l~~n~~~~~~~~~~~~~~~~---~-l~~~~il~~~l~~d~-~~lal~~e~~~~~-----~~P~----~~~----~~~ 754 (920)
T 1mhs_A 693 VYRIALSIHLEIFLGLWIAILNR---S-LNIELVVFIAIFADV-ATLAIAYDNAPYS-----QTPV----KWN----LPK 754 (920)
T ss_dssp HHHHHHHHHHHHHHHHHHHSCSC---C-CCHHHHHHHHHHHTT-HHHHCCCCCSGGG-----GSCC----CCC----SSS
T ss_pred HHHHHHHHHHHHHHHHHHHHHhc---c-CCHHHHHHHHHHHHH-HhhhhcccCcccc-----cCCC----Cch----HHH
Confidence 99999999875444443333333 3 667788888888775 9999987653321 3443 111 123
Q ss_pred hhhhhhhhhHHHHHHHHHHHHHhhccccccCCCceeehhhhhhHHHHHHHHHHHHHHHH-hccc--chhhHHHHHHHHHH
Q 001017 997 RILGWALNGVANAAIIFFFCIHAMKQQAFRKGGEVIGLEILGTTMYTCVVWVVNCQMAL-SVTY--FTYIQHLFIWGGIT 1073 (1189)
Q Consensus 997 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~f~~~v~~~n~~~~l-~~~~--~t~~~~~~i~~si~ 1073 (1189)
.+...+..|++.++..++.+++.+... ...|.........|++|+++++...+.++. ++.. |....+..++++++
T Consensus 755 ~~~~~~~~g~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~T~~f~~lv~~~~~~~~~~R~~~~~~~~~~~~~~~~~~~ 832 (920)
T 1mhs_A 755 LWGMSVLLGVVLAVGTWITVTTMYAQG--ENGGIVQNFGNMDEVLFLQISLTENWLIFITRANGPFWSSIPSWQLSGAIF 832 (920)
T ss_dssp CSSCHHHHHHHHHHHHHHHHHHHTTTT--TTCCSSSSSSSHHHHHHHHHHHHHHHHTTSSSCSSSCSCCSCTHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhc--ccccccchhhHHHHHHHHHHHHHHHHHHHHhccchhhhcCchHHHHHHHHH
Confidence 333344566666666554443332210 011111112246899999999988777753 2222 33234555666666
Q ss_pred HHHHHHHHHhccCccccchhHHHHHHHhccChHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001017 1074 FWYIFLLAYGAMDPYISTTAYKVFIEACAPAPSFWLITLLVLMSSLLPYFTYSAIQMR 1131 (1189)
Q Consensus 1074 ~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~ll~~~~~l~~~~~~k~~~~~ 1131 (1189)
+..++++.+.++| . |.+.+.++..|+.+++++++.++...+.|++.+.
T Consensus 833 ~~~~~~~~~~~~~-~---------f~~~~l~~~~~~~~~~~~~~~~~~~e~~k~~~~~ 880 (920)
T 1mhs_A 833 LVDILATCFTIWG-W---------FEHSDTSIVAVVRIWIFSFGIFCIMGGVYYILQD 880 (920)
T ss_dssp HHHHHHHHHHSSS-S---------TTSCSHHHHTHHHHHHHTTHHHHHHHHHHHCCCC
T ss_pred HHHHHHHHHHHhh-h---------hccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 6666666666655 2 2244667888999888888888888888875544
No 5
>3b8c_A ATPase 2, plasma membrane-type; P-type ATPase, proton pump, ATP-binding, hydrogen ION transport, hydrolase, ION transport; HET: ACP; 3.60A {Arabidopsis thaliana}
Probab=100.00 E-value=8.4e-96 Score=924.67 Aligned_cols=787 Identities=17% Similarity=0.180 Sum_probs=563.5
Q ss_pred hhhcccCCCCceEecCCCcchhhhHHHHHHHHHHHHHHHHHHHHHhccccC---CCCCCccchhhhhhHHHHHhhHHHHH
Q 001017 48 FEASVLNYSGNYVRTTKYTLATFFPKALFEQFRRVANVYFLICAILSFTPL---SPYSAVSNVLPLVVVIGATMGKEVLE 124 (1189)
Q Consensus 48 ~~~~~~~~g~N~i~~~k~~~~~flp~~l~~qf~~~~~~~fl~~~il~~~~~---~~~~~~~~~~~l~~vl~~s~i~~~~~ 124 (1189)
.++|+++||+|.++.+++++| +.|++||.+|++++++++++++++.. .....|...+.++++++++.+.++++
T Consensus 38 ~~~r~~~~G~N~l~~~~~~~~----~~~l~~~~~p~~~il~~aaiis~~l~~~~~~~~~~~~~~~I~~~v~i~~~l~~~q 113 (885)
T 3b8c_A 38 GEDRIQIFGPNKLEEKKESKL----LKFLGFMWNPLSWVMEMAAIMAIALANGDGRPPDWQDFVGIICLLVINSTISFIE 113 (885)
T ss_dssp HHHHSSSCCSCCTTTTCCCTT----SSTTSCCCGGGSSHHHHHHHGGGGSSCCTTSCSCCTTHHHHHHHTTTTTTTTTTT
T ss_pred HHHHHHhcCCCccCCCCCCHH----HHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccHHHHHHHHHHHHHHHHHHHHH
Confidence 477899999999999987776 56778999999999999999998741 11124555667777788888889999
Q ss_pred HHHHhhhhHHH---hcceEEEEecCCeEEEeecccCccccEEEeccCCcCCccEEEeecccCCceEEEEecCCCCCCcce
Q 001017 125 DWRRKKQDIEV---NNRKVKVHCGEGAFDYTKWRDLKVGDVVKVEKDEFFPADLILLSSSYEEAICYVETTNLDGETNLK 201 (1189)
Q Consensus 125 d~~~~~~~~~~---n~~~~~v~~r~g~~~~i~~~~l~vGDII~l~~ge~iPaD~vlL~~s~~~g~~~Vd~s~LtGEs~~~ 201 (1189)
+++..++.+.+ .+.+++|+ |||++++|++++|+|||||.|++||.|||||+|++|++ +.||||+|||||.|+
T Consensus 114 e~ka~~al~~L~~~~~~~a~V~-RdG~~~~I~~~~Lv~GDiV~l~~Gd~IPaDg~ll~g~~----l~VdES~LTGES~Pv 188 (885)
T 3b8c_A 114 ENNAGNAAAALMAGLAPKTKVL-RDGKWSEQEAAILVPGDIVSIKLGDIIPADARLLEGDP----LKVDQSALTGESLPV 188 (885)
T ss_dssp TTTTTTHHHHTTTSCSCCCCCC-CSSCSCCCCTTTTCTTSBCCCCSSCCCSSCCCCCCSSC----BCCCCCSTTCCSSCC
T ss_pred HHHHHHHHHHHhccCCCeEEEE-ECCEEEEEEHHHCCCCCEEEECCCCEEeeceEEEEcCc----ccccccccCCCCcce
Confidence 99888877655 46789999 99999999999999999999999999999999999985 689999999999999
Q ss_pred ecccccccccCCCccccccceEEEEeecCCCCceeeEEEEEEcCccccCCCCcccccCceeecCCeEEEEEEEeccccce
Q 001017 202 LKQALDATSNMHEDSNFQNFKAIIRCEDPNANLYTFVGSLELEEQQYPLTPQQLLLRDSKLRNTDCIYGAVIFTGRDTKV 281 (1189)
Q Consensus 202 ~K~~~~~~~~~~~~~~~~~~~~~i~~e~pn~~~~~f~Gt~~~~g~~~~l~~~n~l~rgs~l~nt~~~~gvVv~tG~~Tk~ 281 (1189)
.|.+++.. |+||.+.+|. ++++|++||.+|.+
T Consensus 189 ~K~~g~~v---------------------------~~GT~v~~G~---------------------~~~~V~~tG~~T~~ 220 (885)
T 3b8c_A 189 TKHPGQEV---------------------------FSGSTCKQGE---------------------IEAVVIATGVHTFF 220 (885)
T ss_dssp CBSSCCCC---------------------------CSCCCCCSCC---------------------CCCBCCSCTTTTTS
T ss_pred EecCCCcc---------------------------ccCeEEeeeE---------------------EEEEEEEcCcccHH
Confidence 99876432 6777776666 99999999999976
Q ss_pred eccCC--CCCCCCcHHHHHHHHHHHHHHH-HHHHHHHHHHHHHhhhccccccCcccccccccCCCCCCccCchhhHHHHH
Q 001017 282 FQNST--GPPSKRSKVERRMDKIIYFLFG-ILVLMSFIGSIFFGIATREDLQDGKMKRWYLRPDDTTAYYDPKRAAVAAV 358 (1189)
Q Consensus 282 ~~~~~--~~~~k~s~l~~~~~~~~~~~~~-~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 358 (1189)
++... ....+++++|+.++++..+++. +.+.++++.++++.+ .. . .|.
T Consensus 221 g~i~~lv~~~~~~~~lq~~~~~i~~~~~~~~~~~~~~~~~~~~~~-~~-~-------~~~-------------------- 271 (885)
T 3b8c_A 221 GKAAHLVDSTNQVGHFQKVLTAIGNFCICSIAIGMVIEIIVMYPI-QR-R-------KYR-------------------- 271 (885)
T ss_dssp TTCCCSCCSCSCCSTTTTTTHHHHHHHHHHHHHHHHHHSTTTTTT-TC-S-------CST--------------------
T ss_pred HHHHHHHhcccccChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cc-C-------cHH--------------------
Confidence 54322 1246789999999999876433 222233222211111 00 0 121
Q ss_pred HHHHHHHHHHhccccchhHHHHHHHHHHHHHHHhccccccccccCCcccccCcchhhhccCeeEEEeCCCccccccceEE
Q 001017 359 LHFLTALMLYGYLIPISLYVSIEIVKILQSIFINQDLHMYYEETDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEF 438 (1189)
Q Consensus 359 ~~~~~~l~l~~~~iP~~L~v~l~~~~~~~~~~i~~d~~m~~~~~~~~i~~~~~~~~E~Lg~v~~i~~DKTGTLT~n~m~~ 438 (1189)
..+..++++++.+|||+||++++++.++++.++ +++++++|+++.+|+||++|+||||||||||+|+|+|
T Consensus 272 ~~~~~~v~llv~aiP~aLp~~vti~la~g~~r~----------ak~~ilvk~~~aiE~Lg~v~~Ic~DKTGTLT~n~m~v 341 (885)
T 3b8c_A 272 DGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRL----------SQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSV 341 (885)
T ss_dssp THHHHHHHHTTTTCCSSTTTHHHHTTTHHHHHH----------TTTSCCCSSGGGHHHHTTCCCCEEECCCCCSCCCCCC
T ss_pred HHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHH----------HhCCeEeCCchHHHHHhCCCEEEECCCCCcccCceEE
Confidence 157788999999999999999999999999988 8999999999999999999999999999999999998
Q ss_pred EEEEEcCeecCCCchHHHHHHHHhcCCCCccchhhhhccccccCCCCcCChhhhcCCCCCCCchHHHHHHHHHHhhhcce
Q 001017 439 IKCSIAGTSYGRGVTEVERAMARRKGSPLEEEVTEEQEDKASIKGFNFEDERIMNGSWVNEPHADVIQKFLRLLAICHTA 518 (1189)
Q Consensus 439 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~lalC~~~ 518 (1189)
.++.+. .++.+. ..++++...++|+..
T Consensus 342 ~~~~~~--~~~~~~---------------------------------------------------~~~~ll~~aa~~~~~ 368 (885)
T 3b8c_A 342 DKNLVE--VFCKGV---------------------------------------------------EKDQVLLFAAMASRV 368 (885)
T ss_dssp CSCCCC--SSCSST---------------------------------------------------THHHHHHHHHHHCCS
T ss_pred EEEEEe--ccCCCC---------------------------------------------------CHHHHHHHHHHHhCC
Confidence 632210 010000 013456777888753
Q ss_pred eccccCCCCcEEEEcCChhHHHHHHHHHHCCcEEEEecCceeEEEecCCCCCcceeEEEEEeeeecCCCCCceEEEEEEe
Q 001017 519 LPEVDEENGKISYEAESPDEAAFVIAARELGFEFYERTQTSISVHELDPVTGTKVERSYSLLNVLEFSSSRKRMSVIVRS 598 (1189)
Q Consensus 519 ~~~~~~~~~~~~~~~~sp~e~alv~~a~~~g~~~~~r~~~~~~v~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~ 598 (1189)
. ++||.|.|+++++.+.. . ....+++++.+||+|.||||+++++.
T Consensus 369 ~-------------~~~p~~~Al~~~~~~~~-----------------~-----~~~~~~~~~~~pF~s~~k~~sv~~~~ 413 (885)
T 3b8c_A 369 E-------------NQDAIDAAMVGMLADPK-----------------E-----ARAGIREVHFLPFNPVDKRTALTYID 413 (885)
T ss_dssp S-------------SCCSHHHHHHHTTCCTT-----------------C-----CCCSSCCBCCCCCCTTTCCCCCBBCS
T ss_pred C-------------CCCchHHHHHHHhhchh-----------------h-----HhhcCceeecccCCcccceEEEEEEe
Confidence 1 37999999998764210 0 12456788899999999999999988
Q ss_pred CCCeEEEEEecCchHHHHHhhhcchhhHHHHHHHHHHHHhccCeEEEEEEEecCHHHHHHHHHHHHHHhhhhhhcHHHHH
Q 001017 599 EEGTLLLLSKGADSVMFERLAENGREFEEQTKEHINEYADAGLRTLILAYRELDEKEYKQFNEEFTEAKNSVSADREELA 678 (1189)
Q Consensus 599 ~~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~l~~~a~~Glr~l~~a~r~l~~~e~~~~~~~~~~a~~~~~~~~~~~~ 678 (1189)
.+|+.++|+||||+.|+++|... ++.++.+.+++++++++|+|++++|+|++++++.
T Consensus 414 ~~g~~~~~~KGa~e~il~~c~~~-~~~~~~~~~~~~~~a~~G~rvl~vA~~~~~~~~~---------------------- 470 (885)
T 3b8c_A 414 GSGNWHRVSKGAPEQILELAKAS-NDLSKKVLSIIDKYAERGLRSLAVARQVVPEKTK---------------------- 470 (885)
T ss_dssp SSSCBCBCCCCSGGGTSSSSCCC-STTTTTHHHHHHHHTTTTCEEEEECCBCCCSSSS----------------------
T ss_pred cCCcEEEEEeCCHHHHHHhccCc-hhhHHHHHHHHHHHHhCCCeEEEEEEeccccccc----------------------
Confidence 78888899999999999999642 2345567888999999999999999998865320
Q ss_pred HHHHHHHhcCceEEEeeeecccCCCCcHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcccCCceEEEEeCCCCcccc
Q 001017 679 EEIAEKIEKNLILLGATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKT 758 (1189)
Q Consensus 679 ~~~~~~ie~~l~llG~~~ieD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~ 758 (1189)
+..|+|++|+|+++++||+|++++++|+.|+++||++||+|||+..||.++|+++||..+.. ...
T Consensus 471 ----~~~e~~l~~lGli~i~Dp~R~~a~~aI~~l~~aGI~v~MiTGD~~~tA~~iA~~lGi~~~~~-----~~~------ 535 (885)
T 3b8c_A 471 ----ESPGAPWEFVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMY-----PSS------ 535 (885)
T ss_dssp ----SCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHTTCCCEEEESSCHHHHTHHHHTTTCTTCCS-----TTS------
T ss_pred ----cccccCcEEEEEEEeecccchhHHHHHHHHHHcCCcEEEEcCCChHHHHHHHHHhCCccccC-----Ccc------
Confidence 23568999999999999999999999999999999999999999999999999999964210 000
Q ss_pred cchhhHHHHHHHHHHHhHHHHHhhhhhccccCCCCCCCeEEEEcCchhhhhhh-HHHHHHHHHHHhccceeEEEeCCccc
Q 001017 759 LEKSEDKSAAAAALKASVLHQLIRGKELLDSSNESLGPLALIIDGKSLTYALE-DDVKDLFLELAIGCASVICCRSSPKQ 837 (1189)
Q Consensus 759 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~-~~~~~~~~~~~~~~~~vv~~r~sP~q 837 (1189)
+++|.+++..+. .++.+. .. +..+|+|++|+|
T Consensus 536 -----------------------------------------~l~g~~~~~~~~~~~l~~~----~~--~~~v~arv~P~~ 568 (885)
T 3b8c_A 536 -----------------------------------------ALLGTHKDANLASIPVEEL----IE--KADGFAGVFPEH 568 (885)
T ss_dssp -----------------------------------------SCCBGGGGTTSCCSCHHHH----HH--TSCCEECCCHHH
T ss_pred -----------------------------------------eeeccccccccchhHHHHH----Hh--hCcEEEEECHHH
Confidence 112222211010 111111 11 234999999999
Q ss_pred HHHHHHHHHhcCCCeEEEEcCCCCChhhhhhcCeeEEecCCcchhhhhccccccccchh--hHHHHHHhhhhhhhhhhHh
Q 001017 838 KALVTRLVKTKTSSTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQFRF--LERLLLVHGHWCYRRISSM 915 (1189)
Q Consensus 838 K~~iV~~l~~~~~~~vl~iGDG~ND~~ml~~A~vGI~i~g~~~~~a~~~sD~~i~~f~~--l~~lll~~GR~~~~~i~~~ 915 (1189)
|.++|+.+|+ .|+.|+|+|||.||+|||++|||||||+ +..+.|+++||+++.++++ +..+ +.+||.+|+|++++
T Consensus 569 K~~iV~~lq~-~g~~Vam~GDGvNDapaLk~AdvGIAmg-~gtd~ak~aADivl~~~~~~~I~~a-i~~gR~~~~ni~~~ 645 (885)
T 3b8c_A 569 KYEIVKKLQE-RKHIVGMTGDGVNDAPALKKADIGIAVA-DATDAARGASDIVLTEPGLSVIISA-VLTSRAIFQRMKNY 645 (885)
T ss_dssp HHHHHHHHHH-TTCCCCBCCCSSTTHHHHHHSSSCCCCS-SSHHHHGGGCSSCCSSCSHHHHTHH-HHTHHHHHHHHHHH
T ss_pred HHHHHHHHHH-CCCeEEEEcCCchhHHHHHhCCEeEEeC-CccHHHHHhcceeeccCchhHHHHH-HHHHHHHHHHHHHH
Confidence 9999999998 7999999999999999999999999996 3344588999999998555 6677 89999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcccccccchhhHHHHHHHHHHhhHHHHhhhhcccCCChHHHhhCccchhccccccccch
Q 001017 916 ICYFFYKNIAFGFTLFFFEAYASFSGQPVYNDWFLSLYNVFFTSLPVIALGVFDQDVSARFCLKFPLLYQEGVQNILFSW 995 (1189)
Q Consensus 916 i~~~~~kni~~~~~~~~~~~~~~~sg~~~~~~~~~l~~n~i~~~lp~~~l~~~~~~~~~~~~~~~P~ly~~~~~~~~~~~ 995 (1189)
+.|.+..|+..++..++..+ ++. .++++++++|+|++.+..+ +.++....++ |+ .++...+ .
T Consensus 646 i~~~l~~n~~~~~~~~~~~~--~~~--~~l~p~~il~i~l~~d~~~-l~l~~~~~~~--------~~----~p~~~~~-~ 707 (885)
T 3b8c_A 646 TIYAVSITIRIVFGFMLIAL--IWE--FDFSAFMVLIIAILNDGTI-MTISKDRVKP--------SP----TPDSWKL-K 707 (885)
T ss_dssp HHHHHHHTTTTTSTTHHHHS--SCS--SCSCHHHHHHHHHHHHTTT-CCCCCCCCCC--------SS----CCCSTTT-T
T ss_pred HHHHHHHHHHHHHHHHHHHH--ccC--cCcCHHHHHHHHHHHHHHH-HhhcccccCc--------cc----CCcchhH-H
Confidence 99999999875554444433 222 3478999999999998765 6666532211 11 1222222 4
Q ss_pred hhhhhhhhhhHHHHHHHHHHHHHhhccccccC-CCce-e--ehhhhhhHHHHHHHHHHHHHHHHhc--ccchhhHHHHH-
Q 001017 996 TRILGWALNGVANAAIIFFFCIHAMKQQAFRK-GGEV-I--GLEILGTTMYTCVVWVVNCQMALSV--TYFTYIQHLFI- 1068 (1189)
Q Consensus 996 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~-~--~~~~~~~~~f~~~v~~~n~~~~l~~--~~~t~~~~~~i- 1068 (1189)
..+..+++.|++++++.++++++.+....+.. .|.. . ......+++|...+++..+. .+.+ ..|+|+.+...
T Consensus 708 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~~~~~-~~~~Rs~~~~~~~~~~~~ 786 (885)
T 3b8c_A 708 EIFATGVVLGGYQAIMTVIFFWAAHKTDFFSDTFGVRSIRDNNHELMGAVYLQVSIISQAL-IFVTRSRSWSFVERPGAL 786 (885)
T ss_dssp TTTTTHHHHHSSTHHHHTTSSSCTTTTTTTTCCCCSSCCGGGTHHHHTTTTTTTSSTTGGG-TTCSSSCTTTSTTSTTTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCccccccCcccccchHHHHHHHHHHHHHHHHHHH-HHHhccCCCCcccCccHH
Confidence 44556677788888877655443322111110 0100 0 01123344343222222222 2333 33444333322
Q ss_pred --HHHHHHHHHHHHHHhccCccccchhHHHHHHHhccChHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Q 001017 1069 --WGGITFWYIFLLAYGAMDPYISTTAYKVFIEACAPAPSFWLITLLVLMSSLLPYFTYSAIQMRFF 1133 (1189)
Q Consensus 1069 --~~si~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~ll~~~~~l~~~~~~k~~~~~~~ 1133 (1189)
+..++..++.+++..+.+.. ++...+.++..|+.+++.+++.+++..+.|++.|...
T Consensus 787 ~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~l~~~~~~~~~~~~~~~~~~~e~~k~~~~~~~ 845 (885)
T 3b8c_A 787 LMIAFLIAQLIATLIAVYANWE--------FAKIRGIGWGWAGVIWLYSIVTYFPLDVFKFAIRYIL 845 (885)
T ss_dssp TSGGGSSTTTTTTSSSSSCCCC--------SSCCCCCTTTTHHHHHHHTGGGTHHHHHHHHHHTTC-
T ss_pred HHHHHHHHHHHHHHHHHhcccc--------ccccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 11111112222222221111 1224567788898888888888889999998876543
No 6
>3rfu_A Copper efflux ATPase; alpha helical, CPC, CXXC, ATP-binding, hydrolase, ION transp magnesium, Cu+, membrane, metal-binding; 3.20A {Legionella pneumophila subsp}
Probab=100.00 E-value=6.5e-70 Score=675.92 Aligned_cols=493 Identities=20% Similarity=0.257 Sum_probs=406.3
Q ss_pred hHHHHHhhHHHHHHHHHhhhhHHHh------cceEEEEecCCeEEEeecccCccccEEEeccCCcCCccEEEeecccCCc
Q 001017 112 VVIGATMGKEVLEDWRRKKQDIEVN------NRKVKVHCGEGAFDYTKWRDLKVGDVVKVEKDEFFPADLILLSSSYEEA 185 (1189)
Q Consensus 112 ~vl~~s~i~~~~~d~~~~~~~~~~n------~~~~~v~~r~g~~~~i~~~~l~vGDII~l~~ge~iPaD~vlL~~s~~~g 185 (1189)
+++++..+.+++|.+.++|+.+.++ +.++++++|||++++|++++|+|||+|+|++||.|||||+|++|+
T Consensus 193 ~ii~~~llg~~le~~a~~~~~~ai~~L~~l~p~~a~vv~~dg~~~~v~~~~l~~GDiv~v~~Ge~IPaDg~vl~G~---- 268 (736)
T 3rfu_A 193 VITTLVLLGQVLELKAREQTGSAIRALLKLVPESAHRIKEDGSEEEVSLDNVAVGDLLRVRPGEKIPVDGEVQEGR---- 268 (736)
T ss_dssp HHHHHHHHHHHHHHHHHCCCSSHHHHHTCCCCCEEEEEETTEEEEEEETTTCCTTCEECCCSSEECCSCEEECSSC----
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEecCCEEEEEEHhhCCCCCEEEECCCCcccccEEEEECc----
Confidence 4444555677788888777655443 678888845999999999999999999999999999999999998
Q ss_pred eEEEEecCCCCCCcceecccccccccCCCccccccceEEEEeecCCCCceeeEEEEEEcCccccCCCCcccccCceeecC
Q 001017 186 ICYVETTNLDGETNLKLKQALDATSNMHEDSNFQNFKAIIRCEDPNANLYTFVGSLELEEQQYPLTPQQLLLRDSKLRNT 265 (1189)
Q Consensus 186 ~~~Vd~s~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~~~i~~e~pn~~~~~f~Gt~~~~g~~~~l~~~n~l~rgs~l~nt 265 (1189)
++||||+|||||.|+.|.+++.. |+||++.+|.
T Consensus 269 -~~VDES~LTGES~Pv~K~~gd~v---------------------------~~Gt~~~~G~------------------- 301 (736)
T 3rfu_A 269 -SFVDESMVTGEPIPVAKEASAKV---------------------------IGATINQTGS------------------- 301 (736)
T ss_dssp -EEEECSSSTTCSSCEEECTTCEE---------------------------CTTCEEESCC-------------------
T ss_pred -eEeeecccCCccccEEeccCCcC---------------------------CCceEeccce-------------------
Confidence 89999999999999999998754 8888888887
Q ss_pred CeEEEEEEEecccc---ceeccCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCcccccccccCC
Q 001017 266 DCIYGAVIFTGRDT---KVFQNSTGPPSKRSKVERRMDKIIYFLFGILVLMSFIGSIFFGIATREDLQDGKMKRWYLRPD 342 (1189)
Q Consensus 266 ~~~~gvVv~tG~~T---k~~~~~~~~~~k~s~l~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~ 342 (1189)
+++.|++||.+| ++.+....++.+++++|+.+|++..++++++++++++++++|.++.... .|
T Consensus 302 --~~~~v~~~G~~T~l~~I~~lv~~a~~~k~~~q~~~d~~a~~~v~~vl~ia~~~~~~w~~~~~~~-------~~----- 367 (736)
T 3rfu_A 302 --FVMKALHVGSDTMLARIVQMVSDAQRSRAPIQRLADTVSGWFVPAVILVAVLSFIVWALLGPQP-------AL----- 367 (736)
T ss_dssp --CCEEECCCSTTSHHHHHHHHHHHHHSSCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCSSS-------ST-----
T ss_pred --EEEEEEEechhhHHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCc-------hH-----
Confidence 899999999999 4555566677788999999999999999999999999988876654211 12
Q ss_pred CCCCccCchhhHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHhccccccccccCCcccccCcchhhhccCeeE
Q 001017 343 DTTAYYDPKRAAVAAVLHFLTALMLYGYLIPISLYVSIEIVKILQSIFINQDLHMYYEETDKPARARTSNLNEELGQVDT 422 (1189)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~~~~l~l~~~~iP~~L~v~l~~~~~~~~~~i~~d~~m~~~~~~~~i~~~~~~~~E~Lg~v~~ 422 (1189)
...+..++++++.+|||+|+++++++...+..++ +++++++|+++.+|+||++|+
T Consensus 368 ---------------~~~l~~ai~vlviacPcaL~la~p~a~~~~~~~~----------a~~gilvk~~~alE~l~~v~~ 422 (736)
T 3rfu_A 368 ---------------SYGLIAAVSVLIIACPCALGLATPMSIMVGVGKG----------AQSGVLIKNAEALERMEKVNT 422 (736)
T ss_dssp ---------------THHHHHHHHHHHHHCCSTHHHHHHHHHHHHHHHH----------HHTTEEESCHHHHHHHTSCCE
T ss_pred ---------------HHHHHHHHHhHHHhhhhHHHHHHHHHHHHHHHHH----------hhcceeechHHHHHHhcCCCE
Confidence 1267889999999999999999999999999988 789999999999999999999
Q ss_pred EEeCCCccccccceEEEEEEEcCeecCCCchHHHHHHHHhcCCCCccchhhhhccccccCCCCcCChhhhcCCCCCCCch
Q 001017 423 ILSDKTGTLTCNSMEFIKCSIAGTSYGRGVTEVERAMARRKGSPLEEEVTEEQEDKASIKGFNFEDERIMNGSWVNEPHA 502 (1189)
Q Consensus 423 i~~DKTGTLT~n~m~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 502 (1189)
||||||||||+|+|++.++..++.. +
T Consensus 423 i~fDKTGTLT~g~~~v~~i~~~~~~------~------------------------------------------------ 448 (736)
T 3rfu_A 423 LVVDKTGTLTEGHPKLTRIVTDDFV------E------------------------------------------------ 448 (736)
T ss_dssp EEECCBTTTBCSSCEEEEEEESSSC------H------------------------------------------------
T ss_pred EEEeCCCCCcCCceEEEEEEecCCC------H------------------------------------------------
Confidence 9999999999999999998733211 0
Q ss_pred HHHHHHHHHHhhhcceeccccCCCCcEEEEcCChhHHHHHHHHHHCCcEEEEecCceeEEEecCCCCCcceeEEEEEeee
Q 001017 503 DVIQKFLRLLAICHTALPEVDEENGKISYEAESPDEAAFVIAARELGFEFYERTQTSISVHELDPVTGTKVERSYSLLNV 582 (1189)
Q Consensus 503 ~~~~~~~~~lalC~~~~~~~~~~~~~~~~~~~sp~e~alv~~a~~~g~~~~~r~~~~~~v~~~~~~~~~~~~~~~~il~~ 582 (1189)
.+++...+.+ ++.++||.+.|+++++++.|+.+. ..
T Consensus 449 ---~~~l~~aa~l--------------e~~s~hPla~Aiv~~a~~~~~~~~---------------------------~~ 484 (736)
T 3rfu_A 449 ---DNALALAAAL--------------EHQSEHPLANAIVHAAKEKGLSLG---------------------------SV 484 (736)
T ss_dssp ---HHHHHHHHHH--------------HHSSCCHHHHHHHHHHHTTCCCCC---------------------------CC
T ss_pred ---HHHHHHHHHH--------------hhcCCChHHHHHHHHHHhcCCCcc---------------------------Cc
Confidence 1122222211 112579999999999998775331 12
Q ss_pred ecCCCCCceEEEEEEeCCCeEEEEEecCchHHHHHhhhcchhhHHHHHHHHHHHHhccCeEEEEEEEecCHHHHHHHHHH
Q 001017 583 LEFSSSRKRMSVIVRSEEGTLLLLSKGADSVMFERLAENGREFEEQTKEHINEYADAGLRTLILAYRELDEKEYKQFNEE 662 (1189)
Q Consensus 583 ~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~l~~~a~~Glr~l~~a~r~l~~~e~~~~~~~ 662 (1189)
.+|++.+++.. ... -+|+. +.+|+++.+.+.... .+...+.+++++.+|+|++++|
T Consensus 485 ~~f~~~~g~gv-~~~-~~g~~--~~~G~~~~~~~~~~~-----~~~~~~~~~~~~~~G~~vl~va--------------- 540 (736)
T 3rfu_A 485 EAFEAPTGKGV-VGQ-VDGHH--VAIGNARLMQEHGGD-----NAPLFEKADELRGKGASVMFMA--------------- 540 (736)
T ss_dssp SCCCCCTTTEE-EEC-SSSSC--EEEESHHHHHHHCCC-----CHHHHHHHHHHHHTTCEEEEEE---------------
T ss_pred ccccccCCceE-EEE-ECCEE--EEEcCHHHHHHcCCC-----hhHHHHHHHHHHhcCCeEEEEE---------------
Confidence 35666655432 222 24432 456999877654321 2345677889999999999999
Q ss_pred HHHHhhhhhhcHHHHHHHHHHHHhcCceEEEeeeecccCCCCcHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcccC
Q 001017 663 FTEAKNSVSADREELAEEIAEKIEKNLILLGATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQ 742 (1189)
Q Consensus 663 ~~~a~~~~~~~~~~~~~~~~~~ie~~l~llG~~~ieD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~ 742 (1189)
.|.+++|+++++|++|++++++|+.|+++||+++|+|||+..+|..+|+++||..
T Consensus 541 ------------------------~d~~~~G~i~i~D~i~~~~~~aI~~L~~~Gi~v~mlTGd~~~~a~~ia~~lgi~~- 595 (736)
T 3rfu_A 541 ------------------------VDGKTVALLVVEDPIKSSTPETILELQQSGIEIVMLTGDSKRTAEAVAGTLGIKK- 595 (736)
T ss_dssp ------------------------ETTEEEEEEEEECCBCSSHHHHHHHHHHHTCEEEEECSSCHHHHHHHHHHHTCCC-
T ss_pred ------------------------ECCEEEEEEEeeccchhhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCE-
Confidence 5678999999999999999999999999999999999999999999999999832
Q ss_pred CceEEEEeCCCCcccccchhhHHHHHHHHHHHhHHHHHhhhhhccccCCCCCCCeEEEEcCchhhhhhhHHHHHHHHHHH
Q 001017 743 GMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELA 822 (1189)
Q Consensus 743 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~~~ 822 (1189)
T Consensus 596 -------------------------------------------------------------------------------- 595 (736)
T 3rfu_A 596 -------------------------------------------------------------------------------- 595 (736)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hccceeEEEeCCcccHHHHHHHHHhcCCCeEEEEcCCCCChhhhhhcCeeEEecCCcchhhhhcccccccc--chhhHHH
Q 001017 823 IGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQ--FRFLERL 900 (1189)
Q Consensus 823 ~~~~~vv~~r~sP~qK~~iV~~l~~~~~~~vl~iGDG~ND~~ml~~A~vGI~i~g~~~~~a~~~sD~~i~~--f~~l~~l 900 (1189)
++++++|++|.++|+.+++ .++.|+|+|||.||++||++|||||+|+ +..+.|+++||+++.+ ++-+..+
T Consensus 596 ------v~a~~~P~~K~~~v~~l~~-~g~~V~~vGDG~ND~paL~~AdvGIAmg-~g~d~a~~~AD~vl~~~~~~~i~~a 667 (736)
T 3rfu_A 596 ------VVAEIMPEDKSRIVSELKD-KGLIVAMAGDGVNDAPALAKADIGIAMG-TGTDVAIESAGVTLLHGDLRGIAKA 667 (736)
T ss_dssp ------EECSCCHHHHHHHHHHHHH-HSCCEEEEECSSTTHHHHHHSSEEEEES-SSCSHHHHHCSEEECSCCSTTHHHH
T ss_pred ------EEEecCHHHHHHHHHHHHh-cCCEEEEEECChHhHHHHHhCCEEEEeC-CccHHHHHhCCEEEccCCHHHHHHH
Confidence 8999999999999999998 7899999999999999999999999995 3444599999999976 4447777
Q ss_pred HHHhhhhhhhhhhHhHHHHHHHHHHHHHHH
Q 001017 901 LLVHGHWCYRRISSMICYFFYKNIAFGFTL 930 (1189)
Q Consensus 901 ll~~GR~~~~~i~~~i~~~~~kni~~~~~~ 930 (1189)
+.+||..++++++++.|.|.+|++.+.+.
T Consensus 668 -i~~sr~t~~~i~qnl~~a~~yN~~~iplA 696 (736)
T 3rfu_A 668 -RRLSESTMSNIRQNLFFAFIYNVLGVPLA 696 (736)
T ss_dssp -HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred -HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 89999999999999999999998865444
No 7
>3j08_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus}
Probab=100.00 E-value=1.4e-68 Score=660.91 Aligned_cols=485 Identities=20% Similarity=0.255 Sum_probs=396.6
Q ss_pred HHHHhhHHHHHHHHHhhhhH------HHhcceEEEEecCCeEEEeecccCccccEEEeccCCcCCccEEEeecccCCceE
Q 001017 114 IGATMGKEVLEDWRRKKQDI------EVNNRKVKVHCGEGAFDYTKWRDLKVGDVVKVEKDEFFPADLILLSSSYEEAIC 187 (1189)
Q Consensus 114 l~~s~i~~~~~d~~~~~~~~------~~n~~~~~v~~r~g~~~~i~~~~l~vGDII~l~~ge~iPaD~vlL~~s~~~g~~ 187 (1189)
+++..+.+++|++.++|+.+ ++.+++++|+ |||++++|++++|+|||+|.|++||.|||||++++|+ |
T Consensus 103 ~~~~~ig~~le~~~~~~~~~~l~~l~~l~~~~a~v~-r~g~~~~i~~~~l~~GDiv~v~~Ge~IPaDg~vl~G~-----~ 176 (645)
T 3j08_A 103 LAFLLLGRTLEARAKSRTGEAIKKLVGLQAKTAVVI-RDGKEIAVPVEEVAVGDIVIVRPGEKIPVDGVVVEGE-----S 176 (645)
T ss_dssp HHHHHHHHHHHHHHHCCCCCCCHHHHHTSCSEEEEE-ETTEEEEEEGGGCCTTCEEEECTTCBCCSEEEEEECC-----E
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEE-ECCEEEEEEHHHCCCCCEEEECCCCEEeeEEEEEECc-----E
Confidence 33345677788888776533 3347889999 9999999999999999999999999999999999998 8
Q ss_pred EEEecCCCCCCcceecccccccccCCCccccccceEEEEeecCCCCceeeEEEEEEcCccccCCCCcccccCceeecCCe
Q 001017 188 YVETTNLDGETNLKLKQALDATSNMHEDSNFQNFKAIIRCEDPNANLYTFVGSLELEEQQYPLTPQQLLLRDSKLRNTDC 267 (1189)
Q Consensus 188 ~Vd~s~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~~~i~~e~pn~~~~~f~Gt~~~~g~~~~l~~~n~l~rgs~l~nt~~ 267 (1189)
+||||+|||||.|+.|.+++.. |+||++.+|.
T Consensus 177 ~VdeS~LTGES~Pv~K~~g~~v---------------------------~~Gt~~~~g~--------------------- 208 (645)
T 3j08_A 177 YVDESMISGEPVPVLKSKGDEV---------------------------FGATINNTGV--------------------- 208 (645)
T ss_dssp EEECHHHHCCSSCEEECTTCEE---------------------------CTTCEECSSC---------------------
T ss_pred EEEcccccCCCCceecCCCCEe---------------------------eccEEEecCc---------------------
Confidence 9999999999999999887644 7777777666
Q ss_pred EEEEEEEecccc---ceeccCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCcccccccccCCCC
Q 001017 268 IYGAVIFTGRDT---KVFQNSTGPPSKRSKVERRMDKIIYFLFGILVLMSFIGSIFFGIATREDLQDGKMKRWYLRPDDT 344 (1189)
Q Consensus 268 ~~gvVv~tG~~T---k~~~~~~~~~~k~s~l~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (1189)
++++|++||.+| ++.+....++.+++++++.+|++..++++++++++++++++|.++... +|..
T Consensus 209 ~~~~v~~~G~~T~l~~i~~lv~~a~~~k~~~~~~~d~~~~~~~~~vl~~a~~~~~~~~~~~~~--------~~~~----- 275 (645)
T 3j08_A 209 LKIRATRVGGETLLAQIVKLVEDAMGSKPPIQRLADKVVAYFIPTVLLVAISAFIYWYFIAHA--------PLLF----- 275 (645)
T ss_dssp EEEEEEECGGGSHHHHHHHHHSCCCCCCCSHHHHHHHHHHHHHHHHHHHHHHHHHCSSCCCSC--------SCCC-----
T ss_pred EEEEEEEcCCccHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC--------cHHH-----
Confidence 999999999999 556677788889999999999999999999999988887765433211 1211
Q ss_pred CCccCchhhHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHhccccccccccCCcccccCcchhhhccCeeEEE
Q 001017 345 TAYYDPKRAAVAAVLHFLTALMLYGYLIPISLYVSIEIVKILQSIFINQDLHMYYEETDKPARARTSNLNEELGQVDTIL 424 (1189)
Q Consensus 345 ~~~~~~~~~~~~~~~~~~~~l~l~~~~iP~~L~v~l~~~~~~~~~~i~~d~~m~~~~~~~~i~~~~~~~~E~Lg~v~~i~ 424 (1189)
.+..++++++.+|||+|+++++++...+..++ +++++++|+++.+|+||++|+||
T Consensus 276 ---------------~~~~~i~vlvia~P~aL~la~p~a~~~~~~~~----------a~~gilvk~~~~lE~lg~v~~i~ 330 (645)
T 3j08_A 276 ---------------AFTTLIAVLVVACPCAFGLATPTALTVGMGKG----------AELGILIKNADALEVAEKVTAVI 330 (645)
T ss_dssp ---------------TTTTTHHHHHHHSCTTHHHHHHHHHHHHHHHH----------HTTCCCCSSTTHHHHGGGCCEEE
T ss_pred ---------------HHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHH----------HHCCeEecCchHHHHhhCCCEEE
Confidence 45667888899999999999999999999988 78999999999999999999999
Q ss_pred eCCCccccccceEEEEEEEcCeecCCCchHHHHHHHHhcCCCCccchhhhhccccccCCCCcCChhhhcCCCCCCCchHH
Q 001017 425 SDKTGTLTCNSMEFIKCSIAGTSYGRGVTEVERAMARRKGSPLEEEVTEEQEDKASIKGFNFEDERIMNGSWVNEPHADV 504 (1189)
Q Consensus 425 ~DKTGTLT~n~m~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 504 (1189)
||||||||+|+|++.++...+..
T Consensus 331 fDKTGTLT~~~~~v~~~~~~~~~--------------------------------------------------------- 353 (645)
T 3j08_A 331 FDKTGTLTKGKPEVTDLVPLNGD--------------------------------------------------------- 353 (645)
T ss_dssp EEGGGTSSSSCCEEEEEEESSSC---------------------------------------------------------
T ss_pred EcCcccccCCCeEEEEEEeCCCC---------------------------------------------------------
Confidence 99999999999999999865311
Q ss_pred HHHHHHHHhhhcceeccccCCCCcEEEEcCChhHHHHHHHHHHCCcEEEEecCceeEEEecCCCCCcceeEEEEEeeeec
Q 001017 505 IQKFLRLLAICHTALPEVDEENGKISYEAESPDEAAFVIAARELGFEFYERTQTSISVHELDPVTGTKVERSYSLLNVLE 584 (1189)
Q Consensus 505 ~~~~~~~lalC~~~~~~~~~~~~~~~~~~~sp~e~alv~~a~~~g~~~~~r~~~~~~v~~~~~~~~~~~~~~~~il~~~~ 584 (1189)
.++++...+.|+. .++||++.|+++++++.|+.....++ +. ...|++...
T Consensus 354 ~~~~l~~aa~~e~--------------~s~hPla~Aiv~~a~~~g~~~~~~~~--~~-----~~~g~g~~~--------- 403 (645)
T 3j08_A 354 ERELLRLAAIAER--------------RSEHPIAEAIVKKALEHGIELGEPEK--VE-----VIAGEGVVA--------- 403 (645)
T ss_dssp HHHHHHHHHHHHT--------------TCCSHHHHHHHHHHHHTTCCCCSCCC--CE-----EETTTEEEE---------
T ss_pred HHHHHHHHHHHhh--------------cCCChhHHHHHHHHHhcCCCcCCccc--eE-----EecCCceEE---------
Confidence 0134444444432 25799999999999998875422110 00 000111000
Q ss_pred CCCCCceEEEEEEeCCCeEEEEEecCchHHHHHhhhcchhhHHHHHHHHHHHHhccCeEEEEEEEecCHHHHHHHHHHHH
Q 001017 585 FSSSRKRMSVIVRSEEGTLLLLSKGADSVMFERLAENGREFEEQTKEHINEYADAGLRTLILAYRELDEKEYKQFNEEFT 664 (1189)
Q Consensus 585 F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~l~~~a~~Glr~l~~a~r~l~~~e~~~~~~~~~ 664 (1189)
..+.+|+++.+.+. +.+..+.+.+.+++++.+|+|++++|
T Consensus 404 -------------------~~v~~g~~~~~~~~----~~~~~~~~~~~~~~~~~~g~~~l~va----------------- 443 (645)
T 3j08_A 404 -------------------DGILVGNKRLMEDF----GVAVSNEVELALEKLEREAKTAVIVA----------------- 443 (645)
T ss_dssp -------------------TTEEEECHHHHHHT----TCCCCHHHHHHHHHHHTTTCCCEEEE-----------------
T ss_pred -------------------EEEEECCHHHHHhc----CCCccHHHHHHHHHHHhcCCeEEEEE-----------------
Confidence 12456887666432 22334567788889999999999999
Q ss_pred HHhhhhhhcHHHHHHHHHHHHhcCceEEEeeeecccCCCCcHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcccCCc
Q 001017 665 EAKNSVSADREELAEEIAEKIEKNLILLGATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGM 744 (1189)
Q Consensus 665 ~a~~~~~~~~~~~~~~~~~~ie~~l~llG~~~ieD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~ 744 (1189)
.|++++|+++++|++|++++++|+.|+++||+++|+|||+..+|..+|+++|+..
T Consensus 444 ----------------------~~~~~~G~i~~~D~l~~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~lgi~~--- 498 (645)
T 3j08_A 444 ----------------------RNGRVEGIIAVSDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLDL--- 498 (645)
T ss_dssp ----------------------ETTEEEEEEEEECCCTTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCSE---
T ss_pred ----------------------ECCEEEEEEEecCCchhHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCE---
Confidence 5778999999999999999999999999999999999999999999999999831
Q ss_pred eEEEEeCCCCcccccchhhHHHHHHHHHHHhHHHHHhhhhhccccCCCCCCCeEEEEcCchhhhhhhHHHHHHHHHHHhc
Q 001017 745 RQVIISSETPESKTLEKSEDKSAAAAALKASVLHQLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIG 824 (1189)
Q Consensus 745 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~~~~~ 824 (1189)
T Consensus 499 -------------------------------------------------------------------------------- 498 (645)
T 3j08_A 499 -------------------------------------------------------------------------------- 498 (645)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cceeEEEeCCcccHHHHHHHHHhcCCCeEEEEcCCCCChhhhhhcCeeEEecCCcchhhhhcccccccc--chhhHHHHH
Q 001017 825 CASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQ--FRFLERLLL 902 (1189)
Q Consensus 825 ~~~vv~~r~sP~qK~~iV~~l~~~~~~~vl~iGDG~ND~~ml~~A~vGI~i~g~~~~~a~~~sD~~i~~--f~~l~~lll 902 (1189)
++++++|++|..+++.+++ . +.|+|+|||.||++||++||+||+|+ +..+.|+++||+++.+ ++.+..+ +
T Consensus 499 ----~~~~~~P~~K~~~v~~l~~-~-~~v~~vGDg~ND~~al~~A~vgiamg-~g~~~a~~~AD~vl~~~~~~~i~~~-i 570 (645)
T 3j08_A 499 ----VIAEVLPHQKSEEVKKLQA-K-EVVAFVGDGINDAPALAQADLGIAVG-SGSDVAVESGDIVLIRDDLRDVVAA-I 570 (645)
T ss_dssp ----EECSCCTTCHHHHHHHHTT-T-CCEEEEECSSSCHHHHHHSSEEEEEC-CCSCCSSCCSSSEESSCCTTHHHHH-H
T ss_pred ----EEEeCCHHhHHHHHHHHhh-C-CeEEEEeCCHhHHHHHHhCCEEEEeC-CCcHHHHHhCCEEEecCCHHHHHHH-H
Confidence 8999999999999999998 4 89999999999999999999999996 4444599999999965 5557777 7
Q ss_pred HhhhhhhhhhhHhHHHHHHHHHHHHHHH
Q 001017 903 VHGHWCYRRISSMICYFFYKNIAFGFTL 930 (1189)
Q Consensus 903 ~~GR~~~~~i~~~i~~~~~kni~~~~~~ 930 (1189)
.+||+.++++++++.|.+++|++.+.+.
T Consensus 571 ~~~r~~~~~i~~nl~~a~~~N~~~i~la 598 (645)
T 3j08_A 571 QLSRKTMSKIKQNIFWALIYNVILIPAA 598 (645)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8999999999999999999999854443
No 8
>3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus}
Probab=100.00 E-value=2.4e-68 Score=667.97 Aligned_cols=488 Identities=20% Similarity=0.248 Sum_probs=398.5
Q ss_pred hHHHHHhhHHHHHHHHHhhhhHH------HhcceEEEEecCCeEEEeecccCccccEEEeccCCcCCccEEEeecccCCc
Q 001017 112 VVIGATMGKEVLEDWRRKKQDIE------VNNRKVKVHCGEGAFDYTKWRDLKVGDVVKVEKDEFFPADLILLSSSYEEA 185 (1189)
Q Consensus 112 ~vl~~s~i~~~~~d~~~~~~~~~------~n~~~~~v~~r~g~~~~i~~~~l~vGDII~l~~ge~iPaD~vlL~~s~~~g 185 (1189)
+++++..+.+++|++.++|+.+. +.+.+++|+ |||++++|++++|+|||+|.|++||.|||||+|++|+
T Consensus 179 ~i~~~~~ig~~le~~~~~~~~~~i~~l~~l~~~~a~v~-r~g~~~~i~~~~l~~GDiv~v~~Ge~IPaDg~vl~G~---- 253 (723)
T 3j09_A 179 LLLAFLLLGRTLEARAKSRTGEAIKKLVGLQAKTAVVI-RDGKEIAVPVEEVAVGDIVIVRPGEKIPVDGVVVEGE---- 253 (723)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCCTTHHHHHTSCSEEEEE-ETTEEEEEEGGGCCTTCEEEECTTCBCCSEEEEEECC----
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeeEEE-ECCEEEEEEHHHCCCCCEEEECCCCEEeeEEEEEECC----
Confidence 33444456778888888776433 346789999 9999999999999999999999999999999999998
Q ss_pred eEEEEecCCCCCCcceecccccccccCCCccccccceEEEEeecCCCCceeeEEEEEEcCccccCCCCcccccCceeecC
Q 001017 186 ICYVETTNLDGETNLKLKQALDATSNMHEDSNFQNFKAIIRCEDPNANLYTFVGSLELEEQQYPLTPQQLLLRDSKLRNT 265 (1189)
Q Consensus 186 ~~~Vd~s~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~~~i~~e~pn~~~~~f~Gt~~~~g~~~~l~~~n~l~rgs~l~nt 265 (1189)
|+||||+|||||.|+.|.+++.. |+||++.+|.
T Consensus 254 -~~VdeS~LTGES~pv~K~~g~~v---------------------------~~Gt~~~~g~------------------- 286 (723)
T 3j09_A 254 -SYVDESMISGEPVPVLKSKGDEV---------------------------FGATINNTGV------------------- 286 (723)
T ss_dssp -EEEECHHHHCCSSCEEECTTCEE---------------------------CTTCEECSSC-------------------
T ss_pred -eEEecccccCCCcceeecCCCee---------------------------ccceEEecCc-------------------
Confidence 89999999999999999887644 7777777666
Q ss_pred CeEEEEEEEecccc---ceeccCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCcccccccccCC
Q 001017 266 DCIYGAVIFTGRDT---KVFQNSTGPPSKRSKVERRMDKIIYFLFGILVLMSFIGSIFFGIATREDLQDGKMKRWYLRPD 342 (1189)
Q Consensus 266 ~~~~gvVv~tG~~T---k~~~~~~~~~~k~s~l~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~ 342 (1189)
++++|++||.+| ++.+....++.+++++++.+|+++.++++++++++++++++|.++... +|.
T Consensus 287 --~~~~v~~~g~~T~l~~i~~lv~~a~~~k~~~~~~~d~~~~~~~~~vl~~a~~~~~~~~~~~~~--------~~~---- 352 (723)
T 3j09_A 287 --LKIRATRVGGETLLAQIVKLVEDAMGSKPPIQRLADKVVAYFIPTVLLVAISAFIYWYFIAHA--------PLL---- 352 (723)
T ss_dssp --EEEEEEECGGGSHHHHHHHHHSSSCCSCCHHHHHHHHHHHHHHHHHHHHHHHHHTTSCSSTTC--------TTC----
T ss_pred --EEEEEEEecCccHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC--------cHH----
Confidence 999999999999 556667788889999999999999999999999888887665433211 111
Q ss_pred CCCCccCchhhHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHhccccccccccCCcccccCcchhhhccCeeE
Q 001017 343 DTTAYYDPKRAAVAAVLHFLTALMLYGYLIPISLYVSIEIVKILQSIFINQDLHMYYEETDKPARARTSNLNEELGQVDT 422 (1189)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~~~~l~l~~~~iP~~L~v~l~~~~~~~~~~i~~d~~m~~~~~~~~i~~~~~~~~E~Lg~v~~ 422 (1189)
..+..++++++.+|||+|+++++++...+..++ +++++++|+++.+|+||++|+
T Consensus 353 ----------------~~~~~~i~vlvia~P~aL~la~p~a~~~~~~~~----------a~~gilvk~~~~lE~lg~v~~ 406 (723)
T 3j09_A 353 ----------------FAFTTLIAVLVVACPCAFGLATPTALTVGMGKG----------AELGILIKNADALEVAEKVTA 406 (723)
T ss_dssp ----------------CSHHHHHHHHHHHSCTTHHHHHHHHHHHHHHHH----------HTTTCEESSTTHHHHGGGCCE
T ss_pred ----------------HHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHH----------HHCCeEEeChHHHHHhhcCCE
Confidence 157778899999999999999999999999988 889999999999999999999
Q ss_pred EEeCCCccccccceEEEEEEEcCeecCCCchHHHHHHHHhcCCCCccchhhhhccccccCCCCcCChhhhcCCCCCCCch
Q 001017 423 ILSDKTGTLTCNSMEFIKCSIAGTSYGRGVTEVERAMARRKGSPLEEEVTEEQEDKASIKGFNFEDERIMNGSWVNEPHA 502 (1189)
Q Consensus 423 i~~DKTGTLT~n~m~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 502 (1189)
||||||||||+|+|++.++...+..
T Consensus 407 i~fDKTGTLT~g~~~v~~~~~~~~~------------------------------------------------------- 431 (723)
T 3j09_A 407 VIFDKTGTLTKGKPEVTDLVPLNGD------------------------------------------------------- 431 (723)
T ss_dssp EEEEHHHHTSCSCCEEEEEEESSSC-------------------------------------------------------
T ss_pred EEEcCCCccccCceEEEEEEeCCCC-------------------------------------------------------
Confidence 9999999999999999999865311
Q ss_pred HHHHHHHHHHhhhcceeccccCCCCcEEEEcCChhHHHHHHHHHHCCcEEEEecCceeEEEecCCCCCcceeEEEEEeee
Q 001017 503 DVIQKFLRLLAICHTALPEVDEENGKISYEAESPDEAAFVIAARELGFEFYERTQTSISVHELDPVTGTKVERSYSLLNV 582 (1189)
Q Consensus 503 ~~~~~~~~~lalC~~~~~~~~~~~~~~~~~~~sp~e~alv~~a~~~g~~~~~r~~~~~~v~~~~~~~~~~~~~~~~il~~ 582 (1189)
.++++...+.|.. .++||++.|+++++++.|+.+...+. +. ..+|+|...
T Consensus 432 --~~~~l~~aa~~e~--------------~s~hP~~~Ai~~~a~~~~~~~~~~~~--~~-----~~~g~g~~~------- 481 (723)
T 3j09_A 432 --ERELLRLAAIAER--------------RSEHPIAEAIVKKALEHGIELGEPEK--VE-----VIAGEGVVA------- 481 (723)
T ss_dssp --HHHHHHHHHHHHT--------------TCCSHHHHHHHHHHHHTTCCCCSCCC--CE-----EETTTEEEE-------
T ss_pred --HHHHHHHHHHHhc--------------cCCCchhHHHHHHHHhcCCCcCCccc--eE-----EecCCceEE-------
Confidence 0123444444422 25799999999999998875422110 00 001111100
Q ss_pred ecCCCCCceEEEEEEeCCCeEEEEEecCchHHHHHhhhcchhhHHHHHHHHHHHHhccCeEEEEEEEecCHHHHHHHHHH
Q 001017 583 LEFSSSRKRMSVIVRSEEGTLLLLSKGADSVMFERLAENGREFEEQTKEHINEYADAGLRTLILAYRELDEKEYKQFNEE 662 (1189)
Q Consensus 583 ~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~l~~~a~~Glr~l~~a~r~l~~~e~~~~~~~ 662 (1189)
..+.+|+++.+.+.. .+..+.+.+.+++++.+|+|++++|
T Consensus 482 ---------------------~~~~~g~~~~~~~~~----~~~~~~~~~~~~~~~~~g~~~~~va--------------- 521 (723)
T 3j09_A 482 ---------------------DGILVGNKRLMEDFG----VAVSNEVELALEKLEREAKTAVIVA--------------- 521 (723)
T ss_dssp ---------------------TTEEEECHHHHHHTT----CCCCHHHHHHHHHHHTTTCEEEEEE---------------
T ss_pred ---------------------EEEEECCHHHHHhcC----CCccHHHHHHHHHHHhcCCeEEEEE---------------
Confidence 124568877664422 2234567788899999999999999
Q ss_pred HHHHhhhhhhcHHHHHHHHHHHHhcCceEEEeeeecccCCCCcHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcccC
Q 001017 663 FTEAKNSVSADREELAEEIAEKIEKNLILLGATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQ 742 (1189)
Q Consensus 663 ~~~a~~~~~~~~~~~~~~~~~~ie~~l~llG~~~ieD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~ 742 (1189)
.|++++|+++++|++|++++++|+.|+++||++||+|||+..+|..+|+++|+..
T Consensus 522 ------------------------~~~~~~G~i~i~D~~~~~~~~~i~~l~~~Gi~v~~~TGd~~~~a~~ia~~lgi~~- 576 (723)
T 3j09_A 522 ------------------------RNGRVEGIIAVSDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLDL- 576 (723)
T ss_dssp ------------------------ETTEEEEEEEEECCSCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCSE-
T ss_pred ------------------------ECCEEEEEEeecCCcchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCcE-
Confidence 5788999999999999999999999999999999999999999999999999831
Q ss_pred CceEEEEeCCCCcccccchhhHHHHHHHHHHHhHHHHHhhhhhccccCCCCCCCeEEEEcCchhhhhhhHHHHHHHHHHH
Q 001017 743 GMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELA 822 (1189)
Q Consensus 743 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~~~ 822 (1189)
T Consensus 577 -------------------------------------------------------------------------------- 576 (723)
T 3j09_A 577 -------------------------------------------------------------------------------- 576 (723)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hccceeEEEeCCcccHHHHHHHHHhcCCCeEEEEcCCCCChhhhhhcCeeEEecCCcchhhhhcccccccc--chhhHHH
Q 001017 823 IGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQ--FRFLERL 900 (1189)
Q Consensus 823 ~~~~~vv~~r~sP~qK~~iV~~l~~~~~~~vl~iGDG~ND~~ml~~A~vGI~i~g~~~~~a~~~sD~~i~~--f~~l~~l 900 (1189)
++++++|+||..+|+.+++ . +.|+|+|||.||++||++|||||+|+ +..+.|+++||+++.+ ++.+..+
T Consensus 577 ------~~~~~~P~~K~~~v~~l~~-~-~~v~~vGDg~ND~~al~~A~vgiamg-~g~~~a~~~AD~vl~~~~~~~i~~~ 647 (723)
T 3j09_A 577 ------VIAEVLPHQKSEEVKKLQA-K-EVVAFVGDGINDAPALAQADLGIAVG-SGSDVAVESGDIVLIRDDLRDVVAA 647 (723)
T ss_dssp ------EECSCCTTCHHHHHHHHTT-T-CCEEEEECSSTTHHHHHHSSEEEECC-CCSCCSSCCSSEECSSCCTTHHHHH
T ss_pred ------EEccCCHHHHHHHHHHHhc-C-CeEEEEECChhhHHHHhhCCEEEEeC-CCcHHHHHhCCEEEeCCCHHHHHHH
Confidence 8999999999999999998 4 89999999999999999999999996 4444599999999965 5557777
Q ss_pred HHHhhhhhhhhhhHhHHHHHHHHHHHHHHHH
Q 001017 901 LLVHGHWCYRRISSMICYFFYKNIAFGFTLF 931 (1189)
Q Consensus 901 ll~~GR~~~~~i~~~i~~~~~kni~~~~~~~ 931 (1189)
+.+||++++++++++.|.+++|++.+.+.+
T Consensus 648 -i~~~r~~~~~i~~nl~~a~~~n~~~i~~a~ 677 (723)
T 3j09_A 648 -IQLSRKTMSKIKQNIFWALIYNVILIPAAA 677 (723)
T ss_dssp -HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred -HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 789999999999999999999998554443
No 9
>2yj3_A Copper-transporting ATPase; hydrolase, P-type ATPase, COPB, heavy metal translocation; 2.20A {Sulfolobus solfataricus} PDB: 2iye_A 2yj6_A* 2yj5_A* 2yj4_A*
Probab=99.84 E-value=5.9e-26 Score=251.30 Aligned_cols=137 Identities=23% Similarity=0.318 Sum_probs=118.2
Q ss_pred CceEEEeeeecccCCCCcHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcccCCceEEEEeCCCCcccccchhhHHHH
Q 001017 688 NLILLGATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSA 767 (1189)
Q Consensus 688 ~l~llG~~~ieD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 767 (1189)
+-.+.|.+.++|+++||+.++|+.|++.|++++|+|||+..++..+++++|+..
T Consensus 124 ~~~~~~~~~~~~~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~gl~~-------------------------- 177 (263)
T 2yj3_A 124 NGEPIASFNISDVPRPNLKDYLEKLKNEGLKIIILSGDKEDKVKELSKELNIQE-------------------------- 177 (263)
Confidence 445889999999999999999999999999999999999999999999998731
Q ss_pred HHHHHHHhHHHHHhhhhhccccCCCCCCCeEEEEcCchhhhhhhHHHHHHHHHHHhccceeEEEeCCcccHHHHHHHHHh
Q 001017 768 AAAALKASVLHQLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKT 847 (1189)
Q Consensus 768 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~~~~~~~~vv~~r~sP~qK~~iV~~l~~ 847 (1189)
+|+.+.|+.|..+++.++.
T Consensus 178 -------------------------------------------------------------~f~~~~p~~k~~~~~~l~~ 196 (263)
T 2yj3_A 178 -------------------------------------------------------------YYSNLSPEDKVRIIEKLKQ 196 (263)
Confidence 4555569999999999987
Q ss_pred cCCCeEEEEcCCCCChhhhhhcCeeEEecCCcchhhhhcccccc--ccchhhHHHHHHhhhhhhhhhhH
Q 001017 848 KTSSTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAI--AQFRFLERLLLVHGHWCYRRISS 914 (1189)
Q Consensus 848 ~~~~~vl~iGDG~ND~~ml~~A~vGI~i~g~~~~~a~~~sD~~i--~~f~~l~~lll~~GR~~~~~i~~ 914 (1189)
.++.|+|||||.||++|+++||+||++.. ....+...||+++ .++..+..+ +..+|.++++++.
T Consensus 197 -~~~~~~~VGD~~~D~~aa~~Agv~va~g~-~~~~~~~~ad~v~~~~~l~~l~~~-l~~~r~~~~~i~~ 262 (263)
T 2yj3_A 197 -NGNKVLMIGDGVNDAAALALADVSVAMGN-GVDISKNVADIILVSNDIGTLLGL-IKNRKRLSNAIPS 262 (263)
Confidence 67889999999999999999999999853 3334678899999 667777777 7889999888865
No 10
>3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I
Probab=99.86 E-value=9.8e-21 Score=212.55 Aligned_cols=272 Identities=24% Similarity=0.281 Sum_probs=194.6
Q ss_pred cCCcccccCcchhhhccCeeEEEeCCCccccccceEEEEEEEcCeecCCCchHHHHHHHHhcCCCCccchhhhhcccccc
Q 001017 402 TDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGTSYGRGVTEVERAMARRKGSPLEEEVTEEQEDKASI 481 (1189)
Q Consensus 402 ~~~~i~~~~~~~~E~Lg~v~~i~~DKTGTLT~n~m~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 481 (1189)
.++|+++|+++.+|.|+++++|+||||||||.+.+.+..+...+. .+
T Consensus 14 ~~~gilik~~~~le~l~~i~~viFD~dGTL~ds~~~~~~~~~~~~------~~--------------------------- 60 (287)
T 3a1c_A 14 AELGILIKNADALEVAEKVTAVIFDKTGTLTKGKPEVTDLVPLNG------DE--------------------------- 60 (287)
T ss_dssp CCCCEEECSTTHHHHHHHCCEEEEECCCCCBCSCCEEEEEEESSS------CH---------------------------
T ss_pred HHCCEEEeCcHHHHHhhcCCEEEEeCCCCCcCCCEEEEEEEeCCC------CH---------------------------
Confidence 789999999999999999999999999999999999988765431 00
Q ss_pred CCCCcCChhhhcCCCCCCCchHHHHHHHHHHhhhcceeccccCCCCcEEEEcCChhHHHHHHHHHHCCcEEEEecCceeE
Q 001017 482 KGFNFEDERIMNGSWVNEPHADVIQKFLRLLAICHTALPEVDEENGKISYEAESPDEAAFVIAARELGFEFYERTQTSIS 561 (1189)
Q Consensus 482 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~lalC~~~~~~~~~~~~~~~~~~~sp~e~alv~~a~~~g~~~~~r~~~~~~ 561 (1189)
.+++.. |..+ + ..+.||.+.|+.+++++.|+..... ..+.
T Consensus 61 ------------------------~~~l~~---~~~~--e---------~~s~hp~~~a~~~~~~~~g~~~~~~--~~~~ 100 (287)
T 3a1c_A 61 ------------------------RELLRL---AAIA--E---------RRSEHPIAEAIVKKALEHGIELGEP--EKVE 100 (287)
T ss_dssp ------------------------HHHHHH---HHHH--T---------TTCCSHHHHHHHHHHHHTTCCCCCC--SCEE
T ss_pred ------------------------HHHHHH---HHHH--h---------hcCCCHHHHHHHHHHHhcCCCcccc--ccce
Confidence 112222 2222 1 1257999999999999988742110 0000
Q ss_pred EEecCCCCCcceeEEEEEeeeecCCCCCceEEEEEEeCCCeEEEEEecCchHHHHHhhhcchhhHHHHHHHHHHHHhccC
Q 001017 562 VHELDPVTGTKVERSYSLLNVLEFSSSRKRMSVIVRSEEGTLLLLSKGADSVMFERLAENGREFEEQTKEHINEYADAGL 641 (1189)
Q Consensus 562 v~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~l~~~a~~Gl 641 (1189)
... |.+ +. . ..+.+|.++.+.+.. .+.++.+.+..+.+..+|.
T Consensus 101 -~~~----G~~-------------------~~----~-----~~~~~g~~~~~~~~~----~~~~~~~~~~~~~~~~~g~ 143 (287)
T 3a1c_A 101 -VIA----GEG-------------------VV----A-----DGILVGNKRLMEDFG----VAVSNEVELALEKLEREAK 143 (287)
T ss_dssp -EET----TTE-------------------EE----E-----TTEEEECHHHHHHTT----CCCCHHHHHHHHHHHHTTC
T ss_pred -eec----CCC-------------------eE----E-----EEEEECCHHHHHhcC----CCccHHHHHHHHHHHhCCC
Confidence 000 000 00 0 112346544432211 1111234556677888999
Q ss_pred eEEEEEEEecCHHHHHHHHHHHHHHhhhhhhcHHHHHHHHHHHHhcCceEEEeeeecccCCCCcHHHHHHHHHcCCeEEE
Q 001017 642 RTLILAYRELDEKEYKQFNEEFTEAKNSVSADREELAEEIAEKIEKNLILLGATAVEDKLQNGVPECIDKLAQAGIKLWV 721 (1189)
Q Consensus 642 r~l~~a~r~l~~~e~~~~~~~~~~a~~~~~~~~~~~~~~~~~~ie~~l~llG~~~ieD~lr~~v~~~I~~L~~aGIkv~m 721 (1189)
++++++ .+..++|.+..+++++||+.++|+.|+++|+++.+
T Consensus 144 ~~i~~~---------------------------------------~d~~~~~~~~~~~~~~~g~~~~l~~L~~~g~~~~i 184 (287)
T 3a1c_A 144 TAVIVA---------------------------------------RNGRVEGIIAVSDTLKESAKPAVQELKRMGIKVGM 184 (287)
T ss_dssp EEEEEE---------------------------------------ETTEEEEEEEEECCBCTTHHHHHHHHHHTTCEEEE
T ss_pred eEEEEE---------------------------------------ECCEEEEEEEeccccchhHHHHHHHHHHCCCeEEE
Confidence 999988 35578999999999999999999999999999999
Q ss_pred EcCCChhhHHHHHHHcCcccCCceEEEEeCCCCcccccchhhHHHHHHHHHHHhHHHHHhhhhhccccCCCCCCCeEEEE
Q 001017 722 LTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQLIRGKELLDSSNESLGPLALII 801 (1189)
Q Consensus 722 lTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi 801 (1189)
+||+....+..+.+.+|+..
T Consensus 185 ~T~~~~~~~~~~l~~~gl~~------------------------------------------------------------ 204 (287)
T 3a1c_A 185 ITGDNWRSAEAISRELNLDL------------------------------------------------------------ 204 (287)
T ss_dssp ECSSCHHHHHHHHHHHTCSE------------------------------------------------------------
T ss_pred EeCCCHHHHHHHHHHhCCce------------------------------------------------------------
Confidence 99999999999999988731
Q ss_pred cCchhhhhhhHHHHHHHHHHHhccceeEEEeCCcccHHHHHHHHHhcCCCeEEEEcCCCCChhhhhhcCeeEEecCCcch
Q 001017 802 DGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDGANDVGMLQEADIGVGISGVEGM 881 (1189)
Q Consensus 802 ~G~~l~~~~~~~~~~~~~~~~~~~~~vv~~r~sP~qK~~iV~~l~~~~~~~vl~iGDG~ND~~ml~~A~vGI~i~g~~~~ 881 (1189)
.|..+.|..|...++.+.. . ..++||||+.||++|.+.|++||++.... .
T Consensus 205 ---------------------------~f~~i~~~~K~~~~~~l~~-~-~~~~~vGDs~~Di~~a~~ag~~v~~~~~~-~ 254 (287)
T 3a1c_A 205 ---------------------------VIAEVLPHQKSEEVKKLQA-K-EVVAFVGDGINDAPALAQADLGIAVGSGS-D 254 (287)
T ss_dssp ---------------------------EECSCCTTCHHHHHHHHTT-T-CCEEEEECTTTCHHHHHHSSEEEEECCCS-C
T ss_pred ---------------------------eeeecChHHHHHHHHHHhc-C-CeEEEEECCHHHHHHHHHCCeeEEeCCCC-H
Confidence 4555668899999999887 5 88999999999999999999999995332 2
Q ss_pred hhhhcccccc--ccchhhHHHHHHhhhhhhhhhh
Q 001017 882 QAVMSSDIAI--AQFRFLERLLLVHGHWCYRRIS 913 (1189)
Q Consensus 882 ~a~~~sD~~i--~~f~~l~~lll~~GR~~~~~i~ 913 (1189)
.++..+|+++ .++.-+..+ +..+|.++++++
T Consensus 255 ~~~~~ad~v~~~~~~~~l~~~-l~~~~~~~~~i~ 287 (287)
T 3a1c_A 255 VAVESGDIVLIRDDLRDVVAA-IQLSRKTMSKIK 287 (287)
T ss_dssp CSSCCSSEEESSSCTHHHHHH-HHTTC-------
T ss_pred HHHhhCCEEEeCCCHHHHHHH-HHHHHHHHHhhC
Confidence 3567799999 677777776 788998888764
No 11
>3skx_A Copper-exporting P-type ATPase B; P1B-ATPase, ATP binding domain, copper(II) transporter, MEMB protein, hydrolase; 1.59A {Archaeoglobus fulgidus} PDB: 3sky_A*
Probab=99.84 E-value=8.6e-20 Score=204.04 Aligned_cols=274 Identities=24% Similarity=0.285 Sum_probs=187.7
Q ss_pred ccCcchhhhccCeeEEEeCCCccccccceEEEEEEEcCeecCCCchHHHHHHHHhcCCCCccchhhhhccccccCCCCcC
Q 001017 408 ARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGTSYGRGVTEVERAMARRKGSPLEEEVTEEQEDKASIKGFNFE 487 (1189)
Q Consensus 408 ~~~~~~~E~Lg~v~~i~~DKTGTLT~n~m~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 487 (1189)
+|+++.+|.|++++.|+|||+||||.|+|++..+...+. .
T Consensus 1 ~k~~~~~e~~~~ik~i~FD~DGTL~d~~~~v~~~~~~~~------~---------------------------------- 40 (280)
T 3skx_A 1 MRDRQAFERAKDLQAVIFDKTGTLTEGRFGVTDIVGFNH------S---------------------------------- 40 (280)
T ss_dssp ----CHHHHGGGCCEEEEECCCCCEEEEEEEEEEEESSS------C----------------------------------
T ss_pred CCChHHHHHhcCCCEEEEeCCCcCCCCcEEEEEEEecCC------C----------------------------------
Confidence 478899999999999999999999999999998875432 0
Q ss_pred ChhhhcCCCCCCCchHHHHHHHHHHhhhcceeccccCCCCcEEEEcCChhHHHHHHHHHHCCcEEEEecCceeEEEecCC
Q 001017 488 DERIMNGSWVNEPHADVIQKFLRLLAICHTALPEVDEENGKISYEAESPDEAAFVIAARELGFEFYERTQTSISVHELDP 567 (1189)
Q Consensus 488 ~~~l~~~~~~~~~~~~~~~~~~~~lalC~~~~~~~~~~~~~~~~~~~sp~e~alv~~a~~~g~~~~~r~~~~~~v~~~~~ 567 (1189)
..+++..++.+.. .+.+|...++.++++..|+.....
T Consensus 41 -----------------~~~~~~~~~~~~~--------------~s~~~~~~a~~~~~~~~g~~~~~~------------ 77 (280)
T 3skx_A 41 -----------------EDELLQIAASLEA--------------RSEHPIAAAIVEEAEKRGFGLTEV------------ 77 (280)
T ss_dssp -----------------HHHHHHHHHHHHT--------------TCCSHHHHHHHHHHHHTTCCCCCC------------
T ss_pred -----------------HHHHHHHHHHhhc--------------cCCCHHHHHHHHHHHhcCCCCCCc------------
Confidence 0123333332221 146889999999999988643110
Q ss_pred CCCcceeEEEEEeeeecCCCCCceEEEEEEeCCCeEEEEEecCchHHHHHhhhcchhhHHHHHHHHHHHHhccCeEEEEE
Q 001017 568 VTGTKVERSYSLLNVLEFSSSRKRMSVIVRSEEGTLLLLSKGADSVMFERLAENGREFEEQTKEHINEYADAGLRTLILA 647 (1189)
Q Consensus 568 ~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~l~~~a~~Glr~l~~a 647 (1189)
..+. .++ .+.+...+ ++... ..|.++.+.+...... .....+...+.+.+.++
T Consensus 78 -------~~~~---~~~----g~~~~~~~---~~~~~--~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~ 130 (280)
T 3skx_A 78 -------EEFR---AIP----GKGVEGIV---NGRRY--MVVSPGYIRELGIKTD--------ESVEKLKQQGKTVVFIL 130 (280)
T ss_dssp -------EEEE---EET----TTEEEEEE---TTEEE--EEECHHHHHHTTCCCC--------TTHHHHHTTTCEEEEEE
T ss_pred -------ccee---ecC----CCEEEEEE---CCEEE--EEecHHHHHHcCCCch--------HHHHHHHhCCCeEEEEE
Confidence 0110 000 01111111 22222 2366555543322111 23445677888888877
Q ss_pred EEecCHHHHHHHHHHHHHHhhhhhhcHHHHHHHHHHHHhcCceEEEeeeecccCCCCcHHHHHHHHHcCCeEEEEcCCCh
Q 001017 648 YRELDEKEYKQFNEEFTEAKNSVSADREELAEEIAEKIEKNLILLGATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKM 727 (1189)
Q Consensus 648 ~r~l~~~e~~~~~~~~~~a~~~~~~~~~~~~~~~~~~ie~~l~llG~~~ieD~lr~~v~~~I~~L~~aGIkv~mlTGD~~ 727 (1189)
.+..++|.+.++|+++|++.++++.|++.|+++.++||+..
T Consensus 131 ---------------------------------------~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~T~~~~ 171 (280)
T 3skx_A 131 ---------------------------------------KNGEVSGVIALADRIRPESREAISKLKAIGIKCMMLTGDNR 171 (280)
T ss_dssp ---------------------------------------ETTEEEEEEEEEEEECTTHHHHHHHHHHTTCEEEEECSSCH
T ss_pred ---------------------------------------ECCEEEEEEEecCCCCHhHHHHHHHHHHCCCEEEEEeCCCH
Confidence 45678999999999999999999999999999999999999
Q ss_pred hhHHHHHHHcCcccCCceEEEEeCCCCcccccchhhHHHHHHHHHHHhHHHHHhhhhhccccCCCCCCCeEEEEcCchhh
Q 001017 728 ETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQLIRGKELLDSSNESLGPLALIIDGKSLT 807 (1189)
Q Consensus 728 ~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~ 807 (1189)
..+..+.+.+|+..
T Consensus 172 ~~~~~~~~~~gl~~------------------------------------------------------------------ 185 (280)
T 3skx_A 172 FVAKWVAEELGLDD------------------------------------------------------------------ 185 (280)
T ss_dssp HHHHHHHHHHTCSE------------------------------------------------------------------
T ss_pred HHHHHHHHHcCChh------------------------------------------------------------------
Confidence 99999999998732
Q ss_pred hhhhHHHHHHHHHHHhccceeEEEeCCcccHHHHHHHHHhcCCCeEEEEcCCCCChhhhhhcCeeEEecCCcchhhhhcc
Q 001017 808 YALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSS 887 (1189)
Q Consensus 808 ~~~~~~~~~~~~~~~~~~~~vv~~r~sP~qK~~iV~~l~~~~~~~vl~iGDG~ND~~ml~~A~vGI~i~g~~~~~a~~~s 887 (1189)
.|..+.|.+|...++-+.+ . ..++||||+.||++|++.|++||++.+. ...++..|
T Consensus 186 ---------------------~f~~~~~~~k~~~~k~~~~-~-~~~~~vGD~~nDi~~~~~Ag~~va~~~~-~~~~~~~a 241 (280)
T 3skx_A 186 ---------------------YFAEVLPHEKAEKVKEVQQ-K-YVTAMVGDGVNDAPALAQADVGIAIGAG-TDVAVETA 241 (280)
T ss_dssp ---------------------EECSCCGGGHHHHHHHHHT-T-SCEEEEECTTTTHHHHHHSSEEEECSCC-SSSCCCSS
T ss_pred ---------------------HhHhcCHHHHHHHHHHHHh-c-CCEEEEeCCchhHHHHHhCCceEEecCC-cHHHHhhC
Confidence 5667778899999998887 3 3689999999999999999999999543 33377889
Q ss_pred cccc--ccchhhHHHHHHhhhhhhhhhhHhHHHHHH
Q 001017 888 DIAI--AQFRFLERLLLVHGHWCYRRISSMICYFFY 921 (1189)
Q Consensus 888 D~~i--~~f~~l~~lll~~GR~~~~~i~~~i~~~~~ 921 (1189)
|+++ .+..-+..+ +..+|..+++++.++.|++.
T Consensus 242 ~~~~~~~~~~~l~~~-l~~~~~~~~~~~~n~~~~~~ 276 (280)
T 3skx_A 242 DIVLVRNDPRDVAAI-VELSRKTYSKFHGLSAWSHP 276 (280)
T ss_dssp SEECSSCCTHHHHHH-HHHHHTCCC-----------
T ss_pred CEEEeCCCHHHHHHH-HHHHHHHHHHHHHHHHHHHh
Confidence 9988 556667777 78899999998888877653
No 12
>2hc8_A PACS, cation-transporting ATPase, P-type; copper, COPA, COPB, actuator, transport protein; 1.65A {Archaeoglobus fulgidus} PDB: 2voy_F
Probab=99.81 E-value=1.5e-20 Score=176.22 Aligned_cols=99 Identities=21% Similarity=0.263 Sum_probs=90.4
Q ss_pred hhHHHhcceEEEEecCCeEEEeecccCccccEEEeccCCcCCccEEEeecccCCceEEEEecCCCCCCcceecccccccc
Q 001017 131 QDIEVNNRKVKVHCGEGAFDYTKWRDLKVGDVVKVEKDEFFPADLILLSSSYEEAICYVETTNLDGETNLKLKQALDATS 210 (1189)
Q Consensus 131 ~~~~~n~~~~~v~~r~g~~~~i~~~~l~vGDII~l~~ge~iPaD~vlL~~s~~~g~~~Vd~s~LtGEs~~~~K~~~~~~~ 210 (1189)
+...+.+..++|+ |+|++++|++++|+|||+|.|++||.|||||++++|+ +.||||+||||+.|+.|.+++..
T Consensus 5 ~L~~l~p~~a~v~-r~g~~~~i~~~~l~~GDiv~v~~G~~iPaDg~v~~g~-----~~vdeS~LTGEs~pv~k~~g~~v- 77 (113)
T 2hc8_A 5 KLVGLQAKTAVVI-RDGKEIAVPVEEVAVGDIVIVRPGEKIPVDGVVVEGE-----SYVDESMISGEPVPVLKSKGDEV- 77 (113)
T ss_dssp HHHHHSCSEEEEE-ETTEEEEEEGGGCCTTCEEEECTTCBCCSEEEEEECC-----EEEECHHHHCCSSCEEECTTCEE-
T ss_pred HHhcCCCCEEEEE-ECCEEEEEEHHHCCCCCEEEECCCCEEeeeEEEEEce-----EEEEccccCCCCccEEECCCCEE-
Confidence 3456678999999 9999999999999999999999999999999999998 89999999999999999987643
Q ss_pred cCCCccccccceEEEEeecCCCCceeeEEEEEEcCccccCCCCcccccCceeecCCeEEEEEEEeccccceec
Q 001017 211 NMHEDSNFQNFKAIIRCEDPNANLYTFVGSLELEEQQYPLTPQQLLLRDSKLRNTDCIYGAVIFTGRDTKVFQ 283 (1189)
Q Consensus 211 ~~~~~~~~~~~~~~i~~e~pn~~~~~f~Gt~~~~g~~~~l~~~n~l~rgs~l~nt~~~~gvVv~tG~~Tk~~~ 283 (1189)
|+||++.+|. +.++|++||.+|.+.+
T Consensus 78 --------------------------~aGt~~~~G~---------------------~~~~V~~~g~~T~~~~ 103 (113)
T 2hc8_A 78 --------------------------FGATINNTGV---------------------LKIRATRVGGETLLAQ 103 (113)
T ss_dssp --------------------------CTTCEECSSC---------------------EEEEEEECGGGSHHHH
T ss_pred --------------------------EeCCEEeece---------------------EEEEEEEecCcCHHHH
Confidence 8999999888 9999999999996543
No 13
>2kij_A Copper-transporting ATPase 1; actuator, menkes disease, alternative splicing, ATP-binding, cell membrane, cytoplasm, disease mutation; NMR {Homo sapiens}
Probab=99.74 E-value=8.7e-19 Score=167.47 Aligned_cols=97 Identities=18% Similarity=0.225 Sum_probs=86.5
Q ss_pred hHHHhcceEEEEecCCe------EEEeecccCccccEEEeccCCcCCccEEEeecccCCceEEEEecCCCCCCcceeccc
Q 001017 132 DIEVNNRKVKVHCGEGA------FDYTKWRDLKVGDVVKVEKDEFFPADLILLSSSYEEAICYVETTNLDGETNLKLKQA 205 (1189)
Q Consensus 132 ~~~~n~~~~~v~~r~g~------~~~i~~~~l~vGDII~l~~ge~iPaD~vlL~~s~~~g~~~Vd~s~LtGEs~~~~K~~ 205 (1189)
...+.+..++|+ |+|. ++.|+.++|+|||+|.|++||.|||||+|++|+ +.||||+|||||.|+.|.+
T Consensus 12 L~~l~p~~a~v~-r~g~~~~~~~~~~v~~~~l~~GDiv~v~~G~~iPaDg~vi~g~-----~~vdeS~LTGEs~pv~k~~ 85 (124)
T 2kij_A 12 LISLQATEATIV-TLDSDNILLSEEQVDVELVQRGDIIKVVPGGKFPVDGRVIEGH-----SMVDESLITGEAMPVAKKP 85 (124)
T ss_dssp HHHTCCSEEEEE-ECSSSTTCCEEEEEETTTCCTTCEEECCTTCBCSSCEEECSCC-----CEEECTTTTCCSSCEECCT
T ss_pred HhccCCCEEEEE-ECCCCCceeEEEEEeHHHCCCCCEEEECCCCEEEeeEEEEEcc-----EEEEeccccCCCccEEeCC
Confidence 344568899999 7653 688999999999999999999999999999998 7999999999999999998
Q ss_pred ccccccCCCccccccceEEEEeecCCCCceeeEEEEEEcCccccCCCCcccccCceeecCCeEEEEEEEecccccee
Q 001017 206 LDATSNMHEDSNFQNFKAIIRCEDPNANLYTFVGSLELEEQQYPLTPQQLLLRDSKLRNTDCIYGAVIFTGRDTKVF 282 (1189)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~i~~e~pn~~~~~f~Gt~~~~g~~~~l~~~n~l~rgs~l~nt~~~~gvVv~tG~~Tk~~ 282 (1189)
++.. |+||++.+|. +.+.|+.||.+|.+.
T Consensus 86 g~~v---------------------------~aGt~~~~G~---------------------~~~~v~~~g~~T~~~ 114 (124)
T 2kij_A 86 GSTV---------------------------IAGSINQNGS---------------------LLICATHVGADTTLS 114 (124)
T ss_dssp TEEE---------------------------CTTCEEESSC---------------------CEEEECSCTTTCHHH
T ss_pred CCEE---------------------------EcCCEEeeeE---------------------EEEEEEEecccCHHH
Confidence 7644 8999999988 999999999999654
No 14
>3gwi_A Magnesium-transporting ATPase, P-type 1; P-type ATPase, nucleotide binding, ATP binding, MGTA, membra protein, cell inner membrane; 1.60A {Escherichia coli}
Probab=99.71 E-value=2.2e-18 Score=175.16 Aligned_cols=140 Identities=20% Similarity=0.223 Sum_probs=108.6
Q ss_pred HHHHHHhhhcceeccccCCCCcEEEEcCChhHHHHHHHHHHCCcEEEEecCceeEEEecCCCCCcceeEEEEEeeeecCC
Q 001017 507 KFLRLLAICHTALPEVDEENGKISYEAESPDEAAFVIAARELGFEFYERTQTSISVHELDPVTGTKVERSYSLLNVLEFS 586 (1189)
Q Consensus 507 ~~~~~lalC~~~~~~~~~~~~~~~~~~~sp~e~alv~~a~~~g~~~~~r~~~~~~v~~~~~~~~~~~~~~~~il~~~~F~ 586 (1189)
+.+...++|+..... .+||.|.|+++++...+.. .....|+++..+||+
T Consensus 17 ~vl~~a~L~s~~~~~-----------~~n~~d~Ail~~~~~~~~~--------------------~~~~~~~~~~eiPFd 65 (170)
T 3gwi_A 17 RVLHSAWLNSHYQTG-----------LKNLLDTAVLEGTDEESAR--------------------SLASRWQKIDEIPFD 65 (170)
T ss_dssp HHHHHHHHHHHHCCS-----------CCCHHHHHHHHTSCHHHHH--------------------HHHHHSEEEEEECCC
T ss_pred HHHHHHHHcCCCCCC-----------CCChHHHHHHHHHHhcChh--------------------hhhhcCeEEeeEecC
Confidence 456667777643221 3699999999886542210 012568899999999
Q ss_pred CCCceEEEEEEeCCCeEEEEEecCchHHHHHhhhc---------chhhHHHHHHHHHHHHhccCeEEEEEEEecCHHHHH
Q 001017 587 SSRKRMSVIVRSEEGTLLLLSKGADSVMFERLAEN---------GREFEEQTKEHINEYADAGLRTLILAYRELDEKEYK 657 (1189)
Q Consensus 587 s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~---------~~~~~~~~~~~l~~~a~~Glr~l~~a~r~l~~~e~~ 657 (1189)
|+|||||++++.++|+.++|+|||||.|+++|... +++.++.+.+.+++|+++|+|||++|||+++.++..
T Consensus 66 s~rKrmsvv~~~~~g~~~l~~KGApE~IL~~C~~~~~~g~~~~l~~~~~~~i~~~~~~la~~GlRvLavA~k~~~~~~~~ 145 (170)
T 3gwi_A 66 FERRRMSVVVAENTEHHQLVCKGALQEILNVCSQVRHNGEIVPLDDIMLRKIKRVTDTLNRQGLRVVAVATKYLPAREGD 145 (170)
T ss_dssp TTTCEEEEEEESSSSEEEEEEEECHHHHHTTEEEEEETTEEEECCHHHHHHHHHHHHHHHHTTCEEEEEEEEEEECCSSC
T ss_pred cccCcEEEEEEeCCCCEEEEEcCCcHHHHHHhHHHhcCCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEEEEECCCCccc
Confidence 99999999999888899999999999999999742 345678899999999999999999999999753200
Q ss_pred HHHHHHHHHhhhhhhcHHHHHHHHHHHHhcCceEEEeeeeccc
Q 001017 658 QFNEEFTEAKNSVSADREELAEEIAEKIEKNLILLGATAVEDK 700 (1189)
Q Consensus 658 ~~~~~~~~a~~~~~~~~~~~~~~~~~~ie~~l~llG~~~ieD~ 700 (1189)
.....|+||+|+|++|+-|.
T Consensus 146 -----------------------~~~~~E~~L~f~G~~g~~~~ 165 (170)
T 3gwi_A 146 -----------------------YQRADESDLILEGYIAFLDH 165 (170)
T ss_dssp -----------------------CCGGGSCSEEEEEEEEEEC-
T ss_pred -----------------------cCccccCCcEEEehhccccc
Confidence 01235899999999999885
No 15
>4fe3_A Cytosolic 5'-nucleotidase 3; substrate complex, HAD-like, protein binding; HET: U5P; 1.74A {Mus musculus} PDB: 2g09_A* 2bdu_A* 2g08_A 2g06_A* 2g0a_A* 2q4t_A* 2g07_A* 2jga_A 2vkq_A 2cn1_A
Probab=99.49 E-value=1.9e-14 Score=161.99 Aligned_cols=143 Identities=13% Similarity=0.092 Sum_probs=104.8
Q ss_pred ecccCCCCcHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcccCCceEEEEeCCCCcccccchhhHHHHHHHHHHHhH
Q 001017 697 VEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASV 776 (1189)
Q Consensus 697 ieD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 776 (1189)
..+++|||++++++.|+++|+++.|+|||...++.++|+++|+...+..+..-....
T Consensus 138 ~~i~l~~g~~e~i~~l~~~gi~v~ivSgg~~~~i~~i~~~~g~~~~~~~i~~n~l~~----------------------- 194 (297)
T 4fe3_A 138 SDVMLKEGYENFFGKLQQHGIPVFIFSAGIGDVLEEVIRQAGVYHSNVKVVSNFMDF----------------------- 194 (297)
T ss_dssp SCCCBCBTHHHHHHHHHHTTCCEEEEEEEEHHHHHHHHHHTTCCCTTEEEEEECEEE-----------------------
T ss_pred cCCCCCCcHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHHHcCCCcccceEEeeeEEE-----------------------
Confidence 458999999999999999999999999999999999999999876543332211100
Q ss_pred HHHHhhhhhccccCCCCCCCeEEEEcCchhhhhhhHHHHHHHHHHHhccceeEEEeCCcccHHHHHHHHHhcCCCeEEEE
Q 001017 777 LHQLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAI 856 (1189)
Q Consensus 777 ~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~~~~~~~~vv~~r~sP~qK~~iV~~l~~~~~~~vl~i 856 (1189)
........+.+..+. .+++..|.+|...+..+++ .++.|+|+
T Consensus 195 ----------------~~~~~~~~~~~~~i~---------------------~~~k~~~~~k~~~~~~~~~-~~~~v~~v 236 (297)
T 4fe3_A 195 ----------------DENGVLKGFKGELIH---------------------VFNKHDGALKNTDYFSQLK-DNSNIILL 236 (297)
T ss_dssp ----------------CTTSBEEEECSSCCC---------------------TTCHHHHHHTCHHHHHHTT-TCCEEEEE
T ss_pred ----------------cccceeEeccccccc---------------------hhhcccHHHHHHHHHHhhc-cCCEEEEE
Confidence 001111122222111 4666778888888888877 78899999
Q ss_pred cCCCCChhhh---hhcCeeEEecC------Ccchhhhhccccccccchh--hHHH
Q 001017 857 GDGANDVGML---QEADIGVGISG------VEGMQAVMSSDIAIAQFRF--LERL 900 (1189)
Q Consensus 857 GDG~ND~~ml---~~A~vGI~i~g------~~~~~a~~~sD~~i~~f~~--l~~l 900 (1189)
|||+||+||+ ..||+||+|+- +....|++++|++|.++++ +++.
T Consensus 237 GDGiNDa~m~k~l~~advgiaiGfl~~~v~~~~d~~~e~~Divl~~d~~~~v~~~ 291 (297)
T 4fe3_A 237 GDSQGDLRMADGVANVEHILKIGYLNDRVDELLEKYMDSYDIVLVKEESLEVVNS 291 (297)
T ss_dssp ESSGGGGGTTTTCSCCSEEEEEEEECSSHHHHHHHHHHHSSEEEETCCBCHHHHH
T ss_pred eCcHHHHHHHhCccccCeEEEEEecchhHHHhHHHHHhhCCEEEECCCChHHHHH
Confidence 9999999994 59999999851 2233478999999999766 4444
No 16
>3mn1_A Probable YRBI family phosphatase; structural genomics, PSI, protein structure initiative, NYSG phosphatase; 1.80A {Pseudomonas syringae PV} PDB: 3nrj_A
Probab=99.02 E-value=3.1e-10 Score=118.32 Aligned_cols=137 Identities=11% Similarity=0.083 Sum_probs=104.4
Q ss_pred eEEEeeeecccCCCCcHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcccCCceEEEEeCCCCcccccchhhHHHHHH
Q 001017 690 ILLGATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAA 769 (1189)
Q Consensus 690 ~llG~~~ieD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 769 (1189)
..++...++|.+ +|+.|+++|+++.++||+....+..+++.+|+..
T Consensus 42 ~~~~~~~~~~~~------~l~~L~~~g~~~~i~T~~~~~~~~~~~~~lgl~~---------------------------- 87 (189)
T 3mn1_A 42 SEIKTFNTLDGQ------GIKMLIASGVTTAIISGRKTAIVERRAKSLGIEH---------------------------- 87 (189)
T ss_dssp CEEEEEEHHHHH------HHHHHHHTTCEEEEECSSCCHHHHHHHHHHTCSE----------------------------
T ss_pred cEeeeeccccHH------HHHHHHHCCCEEEEEECcChHHHHHHHHHcCCHH----------------------------
Confidence 345555555544 9999999999999999999999999999999832
Q ss_pred HHHHHhHHHHHhhhhhccccCCCCCCCeEEEEcCchhhhhhhHHHHHHHHHHHhccceeEEEeCCcccHHHHHHHHHhcC
Q 001017 770 AALKASVLHQLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKT 849 (1189)
Q Consensus 770 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~~~~~~~~vv~~r~sP~qK~~iV~~l~~~~ 849 (1189)
+|... ..|...++.+.+..
T Consensus 88 -----------------------------------------------------------~f~~~--~~K~~~~~~~~~~~ 106 (189)
T 3mn1_A 88 -----------------------------------------------------------LFQGR--EDKLVVLDKLLAEL 106 (189)
T ss_dssp -----------------------------------------------------------EECSC--SCHHHHHHHHHHHH
T ss_pred -----------------------------------------------------------HhcCc--CChHHHHHHHHHHc
Confidence 12111 56777776666543
Q ss_pred ---CCeEEEEcCCCCChhhhhhcCeeEEecCCcchhhhhcccccccc------chhhHHHHHHhhhhhhhhhhHhHHHHH
Q 001017 850 ---SSTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQ------FRFLERLLLVHGHWCYRRISSMICYFF 920 (1189)
Q Consensus 850 ---~~~vl~iGDG~ND~~ml~~A~vGI~i~g~~~~~a~~~sD~~i~~------f~~l~~lll~~GR~~~~~i~~~i~~~~ 920 (1189)
.+.+++|||+.||++|++.|++|+++.+.. ..++..||+++.+ .+.+..+ +...|..++++.+.+.|.+
T Consensus 107 g~~~~~~~~vGD~~nDi~~~~~ag~~~~~~~~~-~~~~~~ad~v~~~~~~~G~~~~l~~~-l~~~~~~~~~~~~~~~~~~ 184 (189)
T 3mn1_A 107 QLGYEQVAYLGDDLPDLPVIRRVGLGMAVANAA-SFVREHAHGITRAQGGEGAAREFCEL-ILSAQGNLEAAHSVYLEGH 184 (189)
T ss_dssp TCCGGGEEEEECSGGGHHHHHHSSEEEECTTSC-HHHHHTSSEECSSCTTTTHHHHHHHH-HHHHTTCHHHHHHTTSTTC
T ss_pred CCChhHEEEECCCHHHHHHHHHCCCeEEeCCcc-HHHHHhCCEEecCCCCCcHHHHHHHH-HHHccCcHHHHHHHHhccc
Confidence 478999999999999999999999995433 3478899999987 3556666 5667889999998888876
Q ss_pred HHH
Q 001017 921 YKN 923 (1189)
Q Consensus 921 ~kn 923 (1189)
.+|
T Consensus 185 ~~~ 187 (189)
T 3mn1_A 185 HHH 187 (189)
T ss_dssp ---
T ss_pred ccc
Confidence 654
No 17
>4dw8_A Haloacid dehalogenase-like hydrolase; HAD, putative phosphatase, enzyme function initiative, EFI, structural genomics; 1.50A {Bacteroides thetaiotaomicron} PDB: 3niw_A 4dwo_A
Probab=98.79 E-value=3.7e-09 Score=117.51 Aligned_cols=204 Identities=16% Similarity=0.137 Sum_probs=107.5
Q ss_pred cCCCCcHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcccCCceEEEEeCCC---------CcccccchhhHHHHHHH
Q 001017 700 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSET---------PESKTLEKSEDKSAAAA 770 (1189)
Q Consensus 700 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~---------~~~~~~~~~~~~~~~~~ 770 (1189)
.+-+.+.++|++|+++|++++++||+....+..+...+|+.......+..++.. .....+..+.....++.
T Consensus 22 ~i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~~~~i~~nGa~i~~~~~~~~~~~~~l~~~~~~~i~~~ 101 (279)
T 4dw8_A 22 EISSRNRETLIRIQEQGIRLVLASGRPTYGIVPLANELRMNEFGGFILSYNGGEIINWESKEMMYENVLPNEVVPVLYEC 101 (279)
T ss_dssp CCCHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTGGGTTCEEEEGGGTEEEETTTCCEEEECCCCGGGHHHHHHH
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHhCCCCCCCEEEEeCCeEEEECCCCeEEEEecCCHHHHHHHHHH
Confidence 567888999999999999999999999999999999998732222333222221 11112222222222222
Q ss_pred HHHHhHH----------------------HHHhh----hhhccccCCCCCCCeEEEEcCchhhhhhhHHHHHHHHHHH-h
Q 001017 771 ALKASVL----------------------HQLIR----GKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELA-I 823 (1189)
Q Consensus 771 ~~~~~~~----------------------~~~~~----~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~~~-~ 823 (1189)
.....+. ..... ....+...........++.+..... +.+.+.+.... .
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~~~~~~~~~----~~~~~~l~~~~~~ 177 (279)
T 4dw8_A 102 ARTNHLSILTYDGAEIVTENSLDPYVQKEAFLNKMAIRETNDFLTDITLPVAKCLIVGDAGKL----IPVESELCIRLQG 177 (279)
T ss_dssp HHHTTCEEEEEETTEEEESCTTCHHHHHHHHHHTCEEEECSCHHHHSCSCCSCEEEESCHHHH----HHHHHHHHHHTTT
T ss_pred HHHcCCEEEEEECCEEEEeCCCCHHHHHHhhhcCCCcccHHHHHHhhcCCceEEEEeCCHHHH----HHHHHHHHHHhcC
Confidence 1111000 00000 0000000000011112222211110 12222222211 1
Q ss_pred cccee----EEEeCCcc--cHHHHHHHHHhcCC---CeEEEEcCCCCChhhhhhcCeeEEecCCcchhhhhccccccccc
Q 001017 824 GCASV----ICCRSSPK--QKALVTRLVKTKTS---STTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQF 894 (1189)
Q Consensus 824 ~~~~v----v~~r~sP~--qK~~iV~~l~~~~~---~~vl~iGDG~ND~~ml~~A~vGI~i~g~~~~~a~~~sD~~i~~f 894 (1189)
....+ .+....|. .|+..++.+.++.| ..|++|||+.||++|++.|++||+|++. ...++.+||++..+.
T Consensus 178 ~~~~~~s~~~~~ei~~~~~~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam~na-~~~~k~~A~~v~~~~ 256 (279)
T 4dw8_A 178 KINVFRSEPYFLELVPQGIDKALSLSVLLENIGMTREEVIAIGDGYNDLSMIKFAGMGVAMGNA-QEPVKKAADYITLTN 256 (279)
T ss_dssp TCEEEEEETTEEEEECTTCCHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTS-CHHHHHHCSEECCCG
T ss_pred CEEEEEcCCcEEEEecCCCChHHHHHHHHHHcCCCHHHEEEECCChhhHHHHHHcCcEEEcCCC-cHHHHHhCCEEcCCC
Confidence 11111 12245555 79999988877533 6799999999999999999999999554 444889999998763
Q ss_pred h------hhHHHHHHhhhhh
Q 001017 895 R------FLERLLLVHGHWC 908 (1189)
Q Consensus 895 ~------~l~~lll~~GR~~ 908 (1189)
+ .+.+++..+|+..
T Consensus 257 ~e~Gv~~~i~~~~~~~~~~~ 276 (279)
T 4dw8_A 257 DEDGVAEAIERIFNVEGHHH 276 (279)
T ss_dssp GGTHHHHHHHHHC-------
T ss_pred CCcHHHHHHHHHHhcccccc
Confidence 3 2566666777653
No 18
>3n07_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; structural genomics, phosphatase, PSI-2, protein structure initiative; HET: MSE; 1.76A {Vibrio cholerae}
Probab=98.77 E-value=5.7e-09 Score=108.90 Aligned_cols=96 Identities=18% Similarity=0.143 Sum_probs=76.8
Q ss_pred HHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcccCCceEEEEeCCCCcccccchhhHHHHHHHHHHHhHHHHHhhhhhcc
Q 001017 708 CIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQLIRGKELL 787 (1189)
Q Consensus 708 ~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 787 (1189)
.|+.|+++|+++.++||+....+..+++++|+..
T Consensus 60 ~l~~L~~~G~~~~ivT~~~~~~~~~~l~~lgi~~---------------------------------------------- 93 (195)
T 3n07_A 60 GVKALMNAGIEIAIITGRRSQIVENRMKALGISL---------------------------------------------- 93 (195)
T ss_dssp HHHHHHHTTCEEEEECSSCCHHHHHHHHHTTCCE----------------------------------------------
T ss_pred HHHHHHHCCCEEEEEECcCHHHHHHHHHHcCCcE----------------------------------------------
Confidence 3999999999999999999999999999999832
Q ss_pred ccCCCCCCCeEEEEcCchhhhhhhHHHHHHHHHHHhccceeEEEeCCcccHHHHHHHHHhc---CCCeEEEEcCCCCChh
Q 001017 788 DSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTK---TSSTTLAIGDGANDVG 864 (1189)
Q Consensus 788 ~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~~~~~~~~vv~~r~sP~qK~~iV~~l~~~---~~~~vl~iGDG~ND~~ 864 (1189)
++... ..|...++.+.+. ....+++|||+.||++
T Consensus 94 -----------------------------------------~~~~~--k~k~~~~~~~~~~~~~~~~~~~~vGD~~nDi~ 130 (195)
T 3n07_A 94 -----------------------------------------IYQGQ--DDKVQAYYDICQKLAIAPEQTGYIGDDLIDWP 130 (195)
T ss_dssp -----------------------------------------EECSC--SSHHHHHHHHHHHHCCCGGGEEEEESSGGGHH
T ss_pred -----------------------------------------EeeCC--CCcHHHHHHHHHHhCCCHHHEEEEcCCHHHHH
Confidence 22212 4566666655543 2368999999999999
Q ss_pred hhhhcCeeEEecCCcchhhhhcccccccc
Q 001017 865 MLQEADIGVGISGVEGMQAVMSSDIAIAQ 893 (1189)
Q Consensus 865 ml~~A~vGI~i~g~~~~~a~~~sD~~i~~ 893 (1189)
|++.|++++++.+.. ..++..||+++..
T Consensus 131 ~~~~ag~~va~~na~-~~~~~~ad~v~~~ 158 (195)
T 3n07_A 131 VMEKVALRVCVADGH-PLLAQRANYVTHI 158 (195)
T ss_dssp HHTTSSEEEECTTSC-HHHHHHCSEECSS
T ss_pred HHHHCCCEEEECChH-HHHHHhCCEEEcC
Confidence 999999999996443 3478899999876
No 19
>1k1e_A Deoxy-D-mannose-octulosonate 8-phosphate phosphat; structural genomics, KDO 8-P phosphatase, structure function project, S2F; HET: MES; 1.67A {Haemophilus influenzae RD} SCOP: c.108.1.5 PDB: 1j8d_A*
Probab=98.76 E-value=1.8e-08 Score=103.97 Aligned_cols=129 Identities=11% Similarity=0.063 Sum_probs=94.0
Q ss_pred CCCCcHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcccCCceEEEEeCCCCcccccchhhHHHHHHHHHHHhHHHHH
Q 001017 701 LQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQL 780 (1189)
Q Consensus 701 lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 780 (1189)
+.+++.++|+.|+++|++++++||+....+..+++++|+..
T Consensus 36 ~~~~~~~~l~~L~~~G~~~~i~Tg~~~~~~~~~~~~lgl~~--------------------------------------- 76 (180)
T 1k1e_A 36 FHVRDGLGIKMLMDADIQVAVLSGRDSPILRRRIADLGIKL--------------------------------------- 76 (180)
T ss_dssp EEHHHHHHHHHHHHTTCEEEEEESCCCHHHHHHHHHHTCCE---------------------------------------
T ss_pred eccchHHHHHHHHHCCCeEEEEeCCCcHHHHHHHHHcCCce---------------------------------------
Confidence 34456799999999999999999999999999999998732
Q ss_pred hhhhhccccCCCCCCCeEEEEcCchhhhhhhHHHHHHHHHHHhccceeEEEeCCcccHHHHHHHHHhcCC---CeEEEEc
Q 001017 781 IRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTS---STTLAIG 857 (1189)
Q Consensus 781 ~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~~~~~~~~vv~~r~sP~qK~~iV~~l~~~~~---~~vl~iG 857 (1189)
.+.. ...|...++.+.+..+ +.+++||
T Consensus 77 ------------------------------------------------~~~~--~k~k~~~~~~~~~~~~~~~~~~~~vG 106 (180)
T 1k1e_A 77 ------------------------------------------------FFLG--KLEKETACFDLMKQAGVTAEQTAYIG 106 (180)
T ss_dssp ------------------------------------------------EEES--CSCHHHHHHHHHHHHTCCGGGEEEEE
T ss_pred ------------------------------------------------eecC--CCCcHHHHHHHHHHcCCCHHHEEEEC
Confidence 1111 1446666665544333 7899999
Q ss_pred CCCCChhhhhhcCeeEEecCCcchhhhhccccccccch------hhHHHHHHhhhhhhhhhhHhHHHHH
Q 001017 858 DGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQFR------FLERLLLVHGHWCYRRISSMICYFF 920 (1189)
Q Consensus 858 DG~ND~~ml~~A~vGI~i~g~~~~~a~~~sD~~i~~f~------~l~~lll~~GR~~~~~i~~~i~~~~ 920 (1189)
|+.||++|++.|++++++.+.. ..++..||+++.+.. .+.+. +...|..+.++...+.|.+
T Consensus 107 D~~~Di~~~~~ag~~~~~~~~~-~~~~~~ad~v~~~~~~~g~~~~~~~~-~l~~~~~~~~~~~~~~~~~ 173 (180)
T 1k1e_A 107 DDSVDLPAFAACGTSFAVADAP-IYVKNAVDHVLSTHGGKGAFREMSDM-ILQAQGKSSVFDTAQGFLK 173 (180)
T ss_dssp CSGGGHHHHHHSSEEEECTTSC-HHHHTTSSEECSSCTTTTHHHHHHHH-HHHHTTCTHHHHCHHHHHH
T ss_pred CCHHHHHHHHHcCCeEEeCCcc-HHHHhhCCEEecCCCCCcHHHHHHHH-HHHhcCchhhhhhccchhh
Confidence 9999999999999999995433 336788999998742 23333 3345556777776666654
No 20
>3mpo_A Predicted hydrolase of the HAD superfamily; SGX, PSI, structural genomics, protein structure initiative; 2.90A {Lactobacillus brevis} SCOP: c.108.1.0
Probab=98.71 E-value=1.2e-08 Score=113.45 Aligned_cols=208 Identities=13% Similarity=0.137 Sum_probs=98.3
Q ss_pred cCCCCcHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcccCCceEEEEeCCC--------CcccccchhhHHHHHHHH
Q 001017 700 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSET--------PESKTLEKSEDKSAAAAA 771 (1189)
Q Consensus 700 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~--------~~~~~~~~~~~~~~~~~~ 771 (1189)
.+-+.+.++|++|++.|++++++||+....+..+...+|+.......+..++.. .....+..+.....++..
T Consensus 22 ~i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~~~~i~~nGai~~~~~~~~~~~~~~~~~~~~~i~~~~ 101 (279)
T 3mpo_A 22 ELAQATIDAVQAAKAQGIKVVLCTGRPLTGVQPYLDAMDIDGDDQYAITFNGSVAQTISGKVLTNHSLTYEDYIDLEAWA 101 (279)
T ss_dssp --CHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCCSSSCEEEEGGGTEEEETTSCEEEECCCCHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCCEEEEcCcEEEECCCCCEEEecCCCHHHHHHHHHHH
Confidence 467788999999999999999999999999999999998754333333333320 011112222222222211
Q ss_pred HHHhH-------------------HH----HHhhhh---hccccCCCCCCCeEEEEcCchh-hhhhhHHHHHHHHH-HHh
Q 001017 772 LKASV-------------------LH----QLIRGK---ELLDSSNESLGPLALIIDGKSL-TYALEDDVKDLFLE-LAI 823 (1189)
Q Consensus 772 ~~~~~-------------------~~----~~~~~~---~~~~~~~~~~~~~~lvi~G~~l-~~~~~~~~~~~~~~-~~~ 823 (1189)
....+ .. ...... ..............+++.+..- .....+.+.+.+.. +..
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~~~~~~~~~~~~~~~l~~~~~~~~~~ 181 (279)
T 3mpo_A 102 RKVRAHFQIETPDYIYTANKDISAYTIAESYLVRMLIQYREVSETPRDLTISKAMFVDYPQVIEQVKANMPQDFKDRFSV 181 (279)
T ss_dssp HHTTCCEEEECSSCEEECCSBCCHHHHHHHHHHTCCEEECCGGGSCTTCCCCEEEEECCHHHHHHHHHHCCHHHHHHEEE
T ss_pred HHcCCeEEEEECCEEEEcCCcchHHHHHHhhccCCcceecCHHHhhccCCcEEEEEcCCHHHHHHHHHHHHHHhCCCEEE
Confidence 11100 00 000000 0000000011112222222210 00001111111111 000
Q ss_pred ccceeEEEeCCcc--cHHHHHHHHHhcCC---CeEEEEcCCCCChhhhhhcCeeEEecCCcchhhhhccccccccch---
Q 001017 824 GCASVICCRSSPK--QKALVTRLVKTKTS---STTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQFR--- 895 (1189)
Q Consensus 824 ~~~~vv~~r~sP~--qK~~iV~~l~~~~~---~~vl~iGDG~ND~~ml~~A~vGI~i~g~~~~~a~~~sD~~i~~f~--- 895 (1189)
......+....|. .|+..++.+.++.| ..|++|||+.||++|++.|++||+|++... ..+.+||++..+.+
T Consensus 182 ~~s~~~~~ei~~~~~~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam~na~~-~~k~~A~~v~~~~~e~G 260 (279)
T 3mpo_A 182 VQSAPYFIEVMNRRASKGGTLSELVDQLGLTADDVMTLGDQGNDLTMIKYAGLGVAMGNAID-EVKEAAQAVTLTNAENG 260 (279)
T ss_dssp ECCSSSEEEEEESSCCHHHHHHHHHHHTTCCGGGEEEC--CCTTHHHHHHSTEECBC---CC-HHHHHCSCBC------C
T ss_pred EEecCceEEEecCCCChHHHHHHHHHHcCCCHHHEEEECCchhhHHHHHhcCceeeccCCCH-HHHHhcceeccCCCccH
Confidence 0011123344453 59999998887644 679999999999999999999999965443 48899999987522
Q ss_pred ---hhHHHHHHhhhhh
Q 001017 896 ---FLERLLLVHGHWC 908 (1189)
Q Consensus 896 ---~l~~lll~~GR~~ 908 (1189)
.+.++++-+|+..
T Consensus 261 v~~~i~~~~~~~~~~~ 276 (279)
T 3mpo_A 261 VAAAIRKYALNEGHHH 276 (279)
T ss_dssp HHHHHC----------
T ss_pred HHHHHHHHhcccCccc
Confidence 2556656666643
No 21
>3ij5_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; IDP022 hydrolase, lipopolysaccharide biosynthesis, magnesium, STRU genomics; 1.95A {Yersinia pestis}
Probab=98.71 E-value=2.7e-08 Score=105.12 Aligned_cols=108 Identities=14% Similarity=0.129 Sum_probs=84.9
Q ss_pred EEEeeeecccCCCCcHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcccCCceEEEEeCCCCcccccchhhHHHHHHH
Q 001017 691 LLGATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAA 770 (1189)
Q Consensus 691 llG~~~ieD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 770 (1189)
.+....+.|.+ +|+.|+++|+++.++||+....+..+++++|+..
T Consensus 73 ~~~~~~~~d~~------~L~~L~~~G~~l~I~T~~~~~~~~~~l~~lgi~~----------------------------- 117 (211)
T 3ij5_A 73 ELKAFNVRDGY------GIRCLITSDIDVAIITGRRAKLLEDRANTLGITH----------------------------- 117 (211)
T ss_dssp EEEEEEHHHHH------HHHHHHHTTCEEEEECSSCCHHHHHHHHHHTCCE-----------------------------
T ss_pred HHHHhccchHH------HHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCch-----------------------------
Confidence 44555555554 9999999999999999999999999999999832
Q ss_pred HHHHhHHHHHhhhhhccccCCCCCCCeEEEEcCchhhhhhhHHHHHHHHHHHhccceeEEEeCCcccHHHHHHHHHhc--
Q 001017 771 ALKASVLHQLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTK-- 848 (1189)
Q Consensus 771 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~~~~~~~~vv~~r~sP~qK~~iV~~l~~~-- 848 (1189)
++... ..|..+++.+.+.
T Consensus 118 ----------------------------------------------------------~f~~~--k~K~~~l~~~~~~lg 137 (211)
T 3ij5_A 118 ----------------------------------------------------------LYQGQ--SDKLVAYHELLATLQ 137 (211)
T ss_dssp ----------------------------------------------------------EECSC--SSHHHHHHHHHHHHT
T ss_pred ----------------------------------------------------------hhccc--CChHHHHHHHHHHcC
Confidence 22222 5577777766553
Q ss_pred -CCCeEEEEcCCCCChhhhhhcCeeEEecCCcchhhhhccccccccc
Q 001017 849 -TSSTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQF 894 (1189)
Q Consensus 849 -~~~~vl~iGDG~ND~~ml~~A~vGI~i~g~~~~~a~~~sD~~i~~f 894 (1189)
..+.+++|||+.||++|++.|++++++.+.. ..++..||+++.+.
T Consensus 138 ~~~~~~~~vGDs~nDi~~~~~ag~~~a~~~~~-~~~~~~Ad~v~~~~ 183 (211)
T 3ij5_A 138 CQPEQVAYIGDDLIDWPVMAQVGLSVAVADAH-PLLLPKAHYVTRIK 183 (211)
T ss_dssp CCGGGEEEEECSGGGHHHHTTSSEEEECTTSC-TTTGGGSSEECSSC
T ss_pred cCcceEEEEcCCHHHHHHHHHCCCEEEeCCcc-HHHHhhCCEEEeCC
Confidence 2478999999999999999999999996543 33788999998764
No 22
>3n28_A Phosphoserine phosphatase; HAD family hydrolase, structural genomics, PSI, protein STRU initiative, nysgrc; 2.30A {Vibrio cholerae}
Probab=98.69 E-value=2.1e-08 Score=114.61 Aligned_cols=150 Identities=20% Similarity=0.162 Sum_probs=96.1
Q ss_pred cCCCCcHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcccCCceEEEEeCCCCcccccchhhHHHHHHHHHHHhHHHH
Q 001017 700 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQ 779 (1189)
Q Consensus 700 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 779 (1189)
++.+|+.++++.|+++|+++.|+||+....+..++..+|+...-...+.+...
T Consensus 178 ~~~pg~~~~l~~L~~~g~~~~ivS~~~~~~~~~~~~~lgl~~~~~~~l~~~d~--------------------------- 230 (335)
T 3n28_A 178 PLMPELPELVATLHAFGWKVAIASGGFTYFSDYLKEQLSLDYAQSNTLEIVSG--------------------------- 230 (335)
T ss_dssp CCCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCSEEEEEEEEEETT---------------------------
T ss_pred CcCcCHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCCCeEEeeeeEeeCC---------------------------
Confidence 68999999999999999999999999999999999999984311111111100
Q ss_pred HhhhhhccccCCCCCCCeEEEEcCchhhhhhhHHHHHHHHHHHhccceeEEEe-CCcccHHHHHHHHHhc---CCCeEEE
Q 001017 780 LIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCR-SSPKQKALVTRLVKTK---TSSTTLA 855 (1189)
Q Consensus 780 ~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~~~~~~~~vv~~r-~sP~qK~~iV~~l~~~---~~~~vl~ 855 (1189)
.++|. +... ..+..|...++.+.+. ....|+|
T Consensus 231 --------------------~~tg~------------------------~~~~~~~~kpk~~~~~~~~~~lgi~~~~~v~ 266 (335)
T 3n28_A 231 --------------------KLTGQ------------------------VLGEVVSAQTKADILLTLAQQYDVEIHNTVA 266 (335)
T ss_dssp --------------------EEEEE------------------------EESCCCCHHHHHHHHHHHHHHHTCCGGGEEE
T ss_pred --------------------eeeee------------------------ecccccChhhhHHHHHHHHHHcCCChhhEEE
Confidence 00110 0000 1234466555555443 3478999
Q ss_pred EcCCCCChhhhhhcCeeEEecCCcchhhhhcccccccc--chhhHHHHHHhhhhhhhhhhHhHHHHHHHH
Q 001017 856 IGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQ--FRFLERLLLVHGHWCYRRISSMICYFFYKN 923 (1189)
Q Consensus 856 iGDG~ND~~ml~~A~vGI~i~g~~~~~a~~~sD~~i~~--f~~l~~lll~~GR~~~~~i~~~i~~~~~kn 923 (1189)
||||.||++|++.|++|++|.+.+. .+..||+++.. +.-+..+ +......-.|++.++.+.+.+|
T Consensus 267 vGDs~nDi~~a~~aG~~va~~~~~~--~~~~a~~v~~~~~l~~v~~~-L~~~l~~~~r~~~~~~~~~~~~ 333 (335)
T 3n28_A 267 VGDGANDLVMMAAAGLGVAYHAKPK--VEAKAQTAVRFAGLGGVVCI-LSAALVAQQKLSWKSKEGHHHH 333 (335)
T ss_dssp EECSGGGHHHHHHSSEEEEESCCHH--HHTTSSEEESSSCTHHHHHH-HHHHHHHTTCCCCC--------
T ss_pred EeCCHHHHHHHHHCCCeEEeCCCHH--HHhhCCEEEecCCHHHHHHH-HHhHHHHhhhhccccccccccc
Confidence 9999999999999999999944333 77889998854 2224444 3444445568888888877665
No 23
>3dnp_A Stress response protein YHAX; structural PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, unknown function; HET: MSE; 1.85A {Bacillus subtilis} SCOP: c.108.1.0
Probab=98.68 E-value=1.7e-08 Score=112.73 Aligned_cols=77 Identities=16% Similarity=0.185 Sum_probs=56.0
Q ss_pred ccHHHHHHHHHhcCC---CeEEEEcCCCCChhhhhhcCeeEEecCCcchhhhhccccccccch------hhHHHHHHhhh
Q 001017 836 KQKALVTRLVKTKTS---STTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQFR------FLERLLLVHGH 906 (1189)
Q Consensus 836 ~qK~~iV~~l~~~~~---~~vl~iGDG~ND~~ml~~A~vGI~i~g~~~~~a~~~sD~~i~~f~------~l~~lll~~GR 906 (1189)
..|+..++.+.++.| ..|++|||+.||++|++.|++||+|.+.. ..++..||++..+.. .|.+++...++
T Consensus 201 ~~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam~na~-~~~k~~Ad~v~~s~~edGv~~~i~~~~~~~~~ 279 (290)
T 3dnp_A 201 VSKEAGLALVASELGLSMDDVVAIGHQYDDLPMIELAGLGVAMGNAV-PEIKRKADWVTRSNDEQGVAYMMKEYFRMQQR 279 (290)
T ss_dssp CCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSC-HHHHHHSSEECCCTTTTHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHcCCCHHHEEEECCchhhHHHHHhcCCEEEecCCc-HHHHHhcCEECCCCCccHHHHHHHHHHHhcCc
Confidence 479999988877644 67999999999999999999999996544 448999999987632 25566555666
Q ss_pred hhhhhhh
Q 001017 907 WCYRRIS 913 (1189)
Q Consensus 907 ~~~~~i~ 913 (1189)
+-|.+-.
T Consensus 280 ~~~~~~~ 286 (290)
T 3dnp_A 280 KGFLDKF 286 (290)
T ss_dssp C------
T ss_pred ccHHhHh
Confidence 6555443
No 24
>3ewi_A N-acylneuraminate cytidylyltransferase; beta barrel, HAD-like, rossmannoid fold, nucleotidyltransferase, nucleus; 1.90A {Mus musculus}
Probab=98.66 E-value=2.4e-08 Score=101.18 Aligned_cols=107 Identities=11% Similarity=0.048 Sum_probs=82.4
Q ss_pred CceEEEeeeecccCCCCcHHHHHHHHHcCCeEEEEcCCChhhHHHHHH--HcCcccCCceEEEEeCCCCcccccchhhHH
Q 001017 688 NLILLGATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGF--ACSLLRQGMRQVIISSETPESKTLEKSEDK 765 (1189)
Q Consensus 688 ~l~llG~~~ieD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~--~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~ 765 (1189)
+-..++.+.++|.. +|+.|++.|+++.|+||+ ..+..+++ .+|+.
T Consensus 30 ~g~~~~~f~~~D~~------~L~~Lk~~Gi~~~I~Tg~--~~~~~~l~~l~lgi~------------------------- 76 (168)
T 3ewi_A 30 DQKEIISYDVKDAI------GISLLKKSGIEVRLISER--ACSKQTLSALKLDCK------------------------- 76 (168)
T ss_dssp SCCCEEEEEHHHHH------HHHHHHHTTCEEEEECSS--CCCHHHHHTTCCCCC-------------------------
T ss_pred CCCEEEEEecCcHH------HHHHHHHCCCEEEEEeCc--HHHHHHHHHhCCCcE-------------------------
Confidence 44567777777773 899999999999999999 67778888 44541
Q ss_pred HHHHHHHHHhHHHHHhhhhhccccCCCCCCCeEEEEcCchhhhhhhHHHHHHHHHHHhccceeEEEeCCcccHHHHHHHH
Q 001017 766 SAAAAALKASVLHQLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLV 845 (1189)
Q Consensus 766 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~~~~~~~~vv~~r~sP~qK~~iV~~l 845 (1189)
++ ..+.+|...++.+
T Consensus 77 ---------------------------------------------------------------~~--~g~~~K~~~l~~~ 91 (168)
T 3ewi_A 77 ---------------------------------------------------------------TE--VSVSDKLATVDEW 91 (168)
T ss_dssp ---------------------------------------------------------------EE--CSCSCHHHHHHHH
T ss_pred ---------------------------------------------------------------EE--ECCCChHHHHHHH
Confidence 11 1134677777766
Q ss_pred HhcCC---CeEEEEcCCCCChhhhhhcCeeEEecCCcchhhhhcccccccc
Q 001017 846 KTKTS---STTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQ 893 (1189)
Q Consensus 846 ~~~~~---~~vl~iGDG~ND~~ml~~A~vGI~i~g~~~~~a~~~sD~~i~~ 893 (1189)
.+..+ ..+++|||+.||++|++.|+++++|.+. ...++..||+++..
T Consensus 92 ~~~~gi~~~~~~~vGD~~nDi~~~~~ag~~~a~~na-~~~~k~~Ad~v~~~ 141 (168)
T 3ewi_A 92 RKEMGLCWKEVAYLGNEVSDEECLKRVGLSAVPADA-CSGAQKAVGYICKC 141 (168)
T ss_dssp HHHTTCCGGGEEEECCSGGGHHHHHHSSEEEECTTC-CHHHHTTCSEECSS
T ss_pred HHHcCcChHHEEEEeCCHhHHHHHHHCCCEEEeCCh-hHHHHHhCCEEeCC
Confidence 65433 6899999999999999999999999544 34489999999875
No 25
>3mmz_A Putative HAD family hydrolase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.84A {Streptomyces avermitilis}
Probab=98.65 E-value=5.9e-08 Score=99.61 Aligned_cols=115 Identities=13% Similarity=0.149 Sum_probs=86.9
Q ss_pred EEEeeeecccCCCCcHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcccCCceEEEEeCCCCcccccchhhHHHHHHH
Q 001017 691 LLGATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAA 770 (1189)
Q Consensus 691 llG~~~ieD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 770 (1189)
.+....+.|.+ +|+.|+++|+++.++||+....+..+++.+|+.
T Consensus 36 ~~~~~~~~~~~------~l~~L~~~g~~~~i~T~~~~~~~~~~~~~lgi~------------------------------ 79 (176)
T 3mmz_A 36 EFVSVHRGDGL------GIAALRKSGLTMLILSTEQNPVVAARARKLKIP------------------------------ 79 (176)
T ss_dssp EEEEEEHHHHH------HHHHHHHTTCEEEEEESSCCHHHHHHHHHHTCC------------------------------
T ss_pred HhHhcccccHH------HHHHHHHCCCeEEEEECcChHHHHHHHHHcCCe------------------------------
Confidence 34445555544 899999999999999999999999999999972
Q ss_pred HHHHhHHHHHhhhhhccccCCCCCCCeEEEEcCchhhhhhhHHHHHHHHHHHhccceeEEEeCCcccHHHHHHHHHhcC-
Q 001017 771 ALKASVLHQLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKT- 849 (1189)
Q Consensus 771 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~~~~~~~~vv~~r~sP~qK~~iV~~l~~~~- 849 (1189)
+++.. ..|...++.+.+..
T Consensus 80 ----------------------------------------------------------~~~~~--~~k~~~l~~~~~~~~ 99 (176)
T 3mmz_A 80 ----------------------------------------------------------VLHGI--DRKDLALKQWCEEQG 99 (176)
T ss_dssp ----------------------------------------------------------EEESC--SCHHHHHHHHHHHHT
T ss_pred ----------------------------------------------------------eEeCC--CChHHHHHHHHHHcC
Confidence 11111 45666666665533
Q ss_pred --CCeEEEEcCCCCChhhhhhcCeeEEecCCcchhhhhcccccccc------chhhHHHHH
Q 001017 850 --SSTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQ------FRFLERLLL 902 (1189)
Q Consensus 850 --~~~vl~iGDG~ND~~ml~~A~vGI~i~g~~~~~a~~~sD~~i~~------f~~l~~lll 902 (1189)
.+.+++|||+.||++|++.|++|+++.+.. ..++..||+++.+ .+.+..+|+
T Consensus 100 ~~~~~~~~vGD~~nD~~~~~~ag~~v~~~~~~-~~~~~~ad~v~~~~~~~g~~~~l~~~l~ 159 (176)
T 3mmz_A 100 IAPERVLYVGNDVNDLPCFALVGWPVAVASAH-DVVRGAARAVTTVPGGDGAIREIASWIL 159 (176)
T ss_dssp CCGGGEEEEECSGGGHHHHHHSSEEEECTTCC-HHHHHHSSEECSSCTTTTHHHHHHHHHH
T ss_pred CCHHHEEEEcCCHHHHHHHHHCCCeEECCChh-HHHHHhCCEEecCCCCCcHHHHHHHHHH
Confidence 378999999999999999999999995433 3378889999987 445656533
No 26
>1l6r_A Hypothetical protein TA0175; structural genomics, putative hydrolas midwest center for structural genomics, MCSG, PSI; 1.40A {Thermoplasma acidophilum} SCOP: c.108.1.10 PDB: 1kyt_A
Probab=98.63 E-value=3.4e-08 Score=106.02 Aligned_cols=178 Identities=13% Similarity=0.076 Sum_probs=98.6
Q ss_pred cccCCCCcHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcccCCceEEEEeCCCCc---cccc-chhhHHHHHHHHHH
Q 001017 698 EDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPE---SKTL-EKSEDKSAAAAALK 773 (1189)
Q Consensus 698 eD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~---~~~~-~~~~~~~~~~~~~~ 773 (1189)
..++.+++.++|++|+++|++++++||+....+..+++++|+.. ..+..++.... ...+ ..... ....
T Consensus 20 ~~~i~~~~~~~l~~l~~~g~~~~i~TGr~~~~~~~~~~~l~~~~---~~I~~NGa~i~~~~~~~i~~~~~l-~~~~---- 91 (227)
T 1l6r_A 20 DRLISTKAIESIRSAEKKGLTVSLLSGNVIPVVYALKIFLGING---PVFGENGGIMFDNDGSIKKFFSNE-GTNK---- 91 (227)
T ss_dssp TSCBCHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCCS---CEEEGGGTEEECTTSCEEESSCSH-HHHH----
T ss_pred CCcCCHHHHHHHHHHHHCCCEEEEECCCCcHHHHHHHHHhCCCC---eEEEeCCcEEEeCCCCEEEEeccH-HHHH----
Confidence 34678889999999999999999999999999999999988732 12222222110 0111 00100 1111
Q ss_pred HhHHHHHhhhh---hccccCCCCCCCeEEEEcCchhhhhhhHHHHHHHHHHHhcccee---EEEeCCc--ccHHHHHHHH
Q 001017 774 ASVLHQLIRGK---ELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASV---ICCRSSP--KQKALVTRLV 845 (1189)
Q Consensus 774 ~~~~~~~~~~~---~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~~~~~~~~v---v~~r~sP--~qK~~iV~~l 845 (1189)
.+ ..+.... ..+.... ....... + +. ..+++..+.+.+.. ....+ -+.++.| ..|...++.+
T Consensus 92 -~i-~~~~~~~~~~~~~~~~~-~~~~~~~-~----~~-~~~~~~~~~~~~~~-~~~~~~~~~~~ei~~~~~~K~~~l~~l 161 (227)
T 1l6r_A 92 -FL-EEMSKRTSMRSILTNRW-REASTGF-D----ID-PEDVDYVRKEAESR-GFVIFYSGYSWHLMNRGEDKAFAVNKL 161 (227)
T ss_dssp -HH-HHHTTTSSCBCCGGGGG-CSSSEEE-B----CC-GGGHHHHHHHHHTT-TEEEEEETTEEEEEETTCSHHHHHHHH
T ss_pred -HH-HHHHHHhcCCccccccc-eecccce-E----Ee-cCCHHHHHHHHHhc-CEEEEecCcEEEEecCCCCHHHHHHHH
Confidence 11 1111100 0000000 0001100 0 10 11112122222111 11111 1223446 5899999988
Q ss_pred HhcCC---CeEEEEcCCCCChhhhhhcCeeEEecCCcchhhhhccccccccc
Q 001017 846 KTKTS---STTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQF 894 (1189)
Q Consensus 846 ~~~~~---~~vl~iGDG~ND~~ml~~A~vGI~i~g~~~~~a~~~sD~~i~~f 894 (1189)
.+..+ ..++++||+.||.+|++.|++||+|.+.. ..++..||+++.+.
T Consensus 162 ~~~~~~~~~~~~~iGD~~nD~~m~~~ag~~va~~n~~-~~~k~~a~~v~~~~ 212 (227)
T 1l6r_A 162 KEMYSLEYDEILVIGDSNNDMPMFQLPVRKACPANAT-DNIKAVSDFVSDYS 212 (227)
T ss_dssp HHHTTCCGGGEEEECCSGGGHHHHTSSSEEEECTTSC-HHHHHHCSEECSCC
T ss_pred HHHhCcCHHHEEEECCcHHhHHHHHHcCceEEecCch-HHHHHhCCEEecCC
Confidence 76543 57999999999999999999999996443 34778899988763
No 27
>3dao_A Putative phosphatse; structural genomics, joint center for S genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE 1PE CIT; 1.80A {Eubacterium rectale}
Probab=98.60 E-value=2.3e-07 Score=103.19 Aligned_cols=189 Identities=14% Similarity=0.128 Sum_probs=103.6
Q ss_pred cCCCCcHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcc----cCCceEEEEeCCCCcccccchhhHHHHHHHHHHH-
Q 001017 700 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLL----RQGMRQVIISSETPESKTLEKSEDKSAAAAALKA- 774 (1189)
Q Consensus 700 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~----~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~- 774 (1189)
.+-+.+.++|++|++.|++++++||+....+..+...+++. ..++..+...+.......+..+.....++.....
T Consensus 39 ~i~~~~~~al~~l~~~G~~v~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~i~~~~~~i~~~~l~~~~~~~i~~~~~~~~ 118 (283)
T 3dao_A 39 LIDPEYMSVIDRLIDKGIIFVVCSGRQFSSEFKLFAPIKHKLLYITDGGTVVRTPKEILKTYPMDEDIWKGMCRMVRDEL 118 (283)
T ss_dssp CCCHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHTGGGGGGCEEEETTTTEEECSSCEEEECCCCHHHHHHHHHHHHHHC
T ss_pred cCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCcEEEECCCcEEEECCEEEEEecCCHHHHHHHHHHHHHhc
Confidence 47788999999999999999999999999999988877642 2222222222111111222322222222222111
Q ss_pred --------------------hHHHHHhhhh-------hccccCCCCCCCeEEEE-cCchhhhhhhHHHHHHHHHHHhccc
Q 001017 775 --------------------SVLHQLIRGK-------ELLDSSNESLGPLALII-DGKSLTYALEDDVKDLFLELAIGCA 826 (1189)
Q Consensus 775 --------------------~~~~~~~~~~-------~~~~~~~~~~~~~~lvi-~G~~l~~~~~~~~~~~~~~~~~~~~ 826 (1189)
.....+.... ..+............+. +....... .+.+.+.+.. ...
T Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~ki~i~~~~~~~~~~-~~~l~~~~~~---~~~ 194 (283)
T 3dao_A 119 PACDYFAATPDFCFAEDGGSPIFHLLRDSYGFEMREVDDITRLDRNDIIKFTVFHPDKCEELC-TPVFIPAWNK---KAH 194 (283)
T ss_dssp TTCEEEEECSSCEEESCTTSHHHHHHHHTSCCCEEECSCGGGCCCSCCCEEEEECSSCHHHHH-TTTHHHHHTT---TEE
T ss_pred CCceEEEEeCCeEEEeCCCHHHHHHHHHhhcCCceEcCCHHHcCccCceEEEEEcChHHHHHH-HHHHHHHhcC---CEE
Confidence 0001111000 00000000111122223 22222211 1123233321 111
Q ss_pred ee----EEEeCCcc--cHHHHHHHHHhcCC---CeEEEEcCCCCChhhhhhcCeeEEecCCcchhhhhcccccccc
Q 001017 827 SV----ICCRSSPK--QKALVTRLVKTKTS---STTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQ 893 (1189)
Q Consensus 827 ~v----v~~r~sP~--qK~~iV~~l~~~~~---~~vl~iGDG~ND~~ml~~A~vGI~i~g~~~~~a~~~sD~~i~~ 893 (1189)
.+ .+....|. .|+..++.+.++.| ..|++|||+.||++|++.|++||+|++.. ..++..||++..+
T Consensus 195 ~~~s~~~~~ei~~~~~~K~~~l~~l~~~lgi~~~e~ia~GD~~NDi~ml~~ag~~vam~na~-~~~k~~A~~v~~s 269 (283)
T 3dao_A 195 LAAAGKEWVDCNAKGVSKWTALSYLIDRFDLLPDEVCCFGDNLNDIEMLQNAGISYAVSNAR-QEVIAAAKHTCAP 269 (283)
T ss_dssp EEEETTTEEEEEETTCCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEEETTSC-HHHHHHSSEEECC
T ss_pred EEEecCceEEEeeCCCcHHHHHHHHHHHhCCCHHHEEEECCCHHHHHHHHhCCCEEEcCCCC-HHHHHhcCeECCC
Confidence 11 12334443 69999998887655 67999999999999999999999996544 4488999999875
No 28
>3n1u_A Hydrolase, HAD superfamily, subfamily III A; structural genomics, PSI-2; 1.80A {Legionella pneumophila} SCOP: c.108.1.0
Probab=98.59 E-value=4.6e-08 Score=101.89 Aligned_cols=124 Identities=15% Similarity=0.132 Sum_probs=87.0
Q ss_pred cCCCCcHHH-------HHHHHHcCCeEEEEcCCChhhHHHHHHHcCcccCCceEEEEeCCCCcccccchhhHHHHHHHHH
Q 001017 700 KLQNGVPEC-------IDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAAL 772 (1189)
Q Consensus 700 ~lr~~v~~~-------I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 772 (1189)
+..+++.+. |+.|+++|+++.++||+....+..+++.+|+..
T Consensus 39 ~~~~~~~~~~~~d~~~l~~L~~~g~~~~ivTn~~~~~~~~~l~~lgl~~------------------------------- 87 (191)
T 3n1u_A 39 NHGNELKSFHVQDGMGLKLLMAAGIQVAIITTAQNAVVDHRMEQLGITH------------------------------- 87 (191)
T ss_dssp TTCCEECCBCHHHHHHHHHHHHTTCEEEEECSCCSHHHHHHHHHHTCCE-------------------------------
T ss_pred CCchhhhhccccChHHHHHHHHCCCeEEEEeCcChHHHHHHHHHcCCcc-------------------------------
Confidence 334555555 999999999999999999999999999999842
Q ss_pred HHhHHHHHhhhhhccccCCCCCCCeEEEEcCchhhhhhhHHHHHHHHHHHhccceeEEEeCC--cccHHHHHHHHHhcCC
Q 001017 773 KASVLHQLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSS--PKQKALVTRLVKTKTS 850 (1189)
Q Consensus 773 ~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~~~~~~~~vv~~r~s--P~qK~~iV~~l~~~~~ 850 (1189)
++.... |+-...+++.+.- ..
T Consensus 88 --------------------------------------------------------~~~~~kpk~~~~~~~~~~~~~-~~ 110 (191)
T 3n1u_A 88 --------------------------------------------------------YYKGQVDKRSAYQHLKKTLGL-ND 110 (191)
T ss_dssp --------------------------------------------------------EECSCSSCHHHHHHHHHHHTC-CG
T ss_pred --------------------------------------------------------ceeCCCChHHHHHHHHHHhCC-CH
Confidence 111111 2222233333322 45
Q ss_pred CeEEEEcCCCCChhhhhhcCeeEEecCCcchhhhhcccccccc------chhhHHHHHHhhhhhhhhhh
Q 001017 851 STTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQ------FRFLERLLLVHGHWCYRRIS 913 (1189)
Q Consensus 851 ~~vl~iGDG~ND~~ml~~A~vGI~i~g~~~~~a~~~sD~~i~~------f~~l~~lll~~GR~~~~~i~ 913 (1189)
..+++|||+.||++|++.|++++++.+.. ..++..||+++.+ .+.+..+ +...|..+..+.
T Consensus 111 ~~~~~vGD~~~Di~~~~~ag~~~~~~~~~-~~~~~~ad~v~~~~~~~g~~~~l~~~-ll~~~~~~~~~~ 177 (191)
T 3n1u_A 111 DEFAYIGDDLPDLPLIQQVGLGVAVSNAV-PQVLEFADWRTERTGGRGAVRELCDL-ILNAQNKAELAI 177 (191)
T ss_dssp GGEEEEECSGGGHHHHHHSSEEEECTTCC-HHHHHHSSEECSSCTTTTHHHHHHHH-HHHHTTCHHHHH
T ss_pred HHEEEECCCHHHHHHHHHCCCEEEeCCcc-HHHHHhCCEEecCCCCCcHHHHHHHH-HHHhcCcHHHHH
Confidence 68999999999999999999999996443 4478899999987 3345555 444555555443
No 29
>2pq0_A Hypothetical conserved protein GK1056; hyopthetical protein, structural genomics, unknown function; 2.60A {Geobacillus kaustophilus} PDB: 2qyh_A
Probab=98.52 E-value=2.9e-07 Score=100.77 Aligned_cols=57 Identities=26% Similarity=0.320 Sum_probs=47.6
Q ss_pred cHHHHHHHHHhcCC---CeEEEEcCCCCChhhhhhcCeeEEecCCcchhhhhccccccccc
Q 001017 837 QKALVTRLVKTKTS---STTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQF 894 (1189)
Q Consensus 837 qK~~iV~~l~~~~~---~~vl~iGDG~ND~~ml~~A~vGI~i~g~~~~~a~~~sD~~i~~f 894 (1189)
.|+..++.+.++.| +.|+++||+.||++|++.|++||+|. +....++..||++..+.
T Consensus 183 ~K~~~l~~l~~~lgi~~~~~ia~GDs~NDi~ml~~ag~~vam~-na~~~~k~~A~~v~~~~ 242 (258)
T 2pq0_A 183 SKAEGIRMMIEKLGIDKKDVYAFGDGLNDIEMLSFVGTGVAMG-NAHEEVKRVADFVTKPV 242 (258)
T ss_dssp CHHHHHHHHHHHHTCCGGGEEEECCSGGGHHHHHHSSEEEEET-TCCHHHHHTCSEEECCG
T ss_pred ChHHHHHHHHHHhCCCHHHEEEECCcHHhHHHHHhCCcEEEeC-CCcHHHHHhCCEEeCCC
Confidence 69998888877533 67999999999999999999999995 44455888999998653
No 30
>3e8m_A Acylneuraminate cytidylyltransferase; 2-keto-3-deoxynononic acid 9-phosphate phosphohydrolase, nucleotidyltransferase; HET: PEG PG4 EDO PGE; 1.10A {Bacteroides thetaiotaomicron} PDB: 3e84_A 3e81_A*
Probab=98.52 E-value=1.7e-07 Score=94.91 Aligned_cols=109 Identities=19% Similarity=0.112 Sum_probs=82.2
Q ss_pred HHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcccCCceEEEEeCCCCcccccchhhHHHHHHHHHHHhHHHHHhhhhhcc
Q 001017 708 CIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQLIRGKELL 787 (1189)
Q Consensus 708 ~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 787 (1189)
+++.|+++|+++.++||+....+..+++.+|+..
T Consensus 39 ~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~gl~~---------------------------------------------- 72 (164)
T 3e8m_A 39 GIFWAHNKGIPVGILTGEKTEIVRRRAEKLKVDY---------------------------------------------- 72 (164)
T ss_dssp HHHHHHHTTCCEEEECSSCCHHHHHHHHHTTCSE----------------------------------------------
T ss_pred HHHHHHHCCCEEEEEeCCChHHHHHHHHHcCCCE----------------------------------------------
Confidence 8999999999999999999999999999999832
Q ss_pred ccCCCCCCCeEEEEcCchhhhhhhHHHHHHHHHHHhccceeEEEeCCcccHHHHHHHHHhc---CCCeEEEEcCCCCChh
Q 001017 788 DSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTK---TSSTTLAIGDGANDVG 864 (1189)
Q Consensus 788 ~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~~~~~~~~vv~~r~sP~qK~~iV~~l~~~---~~~~vl~iGDG~ND~~ 864 (1189)
.+... ..|...++.+.+. ..+.+++|||+.||++
T Consensus 73 -----------------------------------------~~~~~--kpk~~~~~~~~~~~~~~~~~~~~vGD~~~Di~ 109 (164)
T 3e8m_A 73 -----------------------------------------LFQGV--VDKLSAAEELCNELGINLEQVAYIGDDLNDAK 109 (164)
T ss_dssp -----------------------------------------EECSC--SCHHHHHHHHHHHHTCCGGGEEEECCSGGGHH
T ss_pred -----------------------------------------eeccc--CChHHHHHHHHHHcCCCHHHEEEECCCHHHHH
Confidence 11111 3455555544433 2368999999999999
Q ss_pred hhhhcCeeEEecCCcchhhhhcccccccc------chhhHHHHHHhhhh
Q 001017 865 MLQEADIGVGISGVEGMQAVMSSDIAIAQ------FRFLERLLLVHGHW 907 (1189)
Q Consensus 865 ml~~A~vGI~i~g~~~~~a~~~sD~~i~~------f~~l~~lll~~GR~ 907 (1189)
|.+.|++++++.+. ...++..||+++.+ ++.+...++ +|+|
T Consensus 110 ~~~~ag~~~~~~~~-~~~~~~~ad~v~~~~~~~g~~~e~~~~ll-~~~~ 156 (164)
T 3e8m_A 110 LLKRVGIAGVPASA-PFYIRRLSTIFLEKRGGEGVFREFVEKVL-GINL 156 (164)
T ss_dssp HHTTSSEEECCTTS-CHHHHTTCSSCCCCCTTTTHHHHHHHHHT-TCCH
T ss_pred HHHHCCCeEEcCCh-HHHHHHhCcEEeccCCCCcHHHHHHHHHH-ccCc
Confidence 99999999998543 33478899999987 444555544 5554
No 31
>3l7y_A Putative uncharacterized protein SMU.1108C; hydrolase; 2.00A {Streptococcus mutans}
Probab=98.47 E-value=1.9e-07 Score=105.06 Aligned_cols=58 Identities=17% Similarity=0.255 Sum_probs=48.7
Q ss_pred ccHHHHHHHHHhcCC---CeEEEEcCCCCChhhhhhcCeeEEecCCcchhhhhccccccccc
Q 001017 836 KQKALVTRLVKTKTS---STTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQF 894 (1189)
Q Consensus 836 ~qK~~iV~~l~~~~~---~~vl~iGDG~ND~~ml~~A~vGI~i~g~~~~~a~~~sD~~i~~f 894 (1189)
..|+..++.+.++.| ..|++|||+.||++|++.|++||+|++.. ..++.+||++..+.
T Consensus 227 ~~K~~al~~l~~~lgi~~~e~i~~GDs~NDi~m~~~ag~~vam~na~-~~~k~~Ad~v~~~~ 287 (304)
T 3l7y_A 227 LHKGWALQQLLKRWNFTSDHLMAFGDGGNDIEMLKLAKYSYAMANAP-KNVKAAANYQAKSN 287 (304)
T ss_dssp CSHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHCTEEEECTTSC-HHHHHHCSEECCCG
T ss_pred CCHHHHHHHHHHHhCcCHHHEEEECCCHHHHHHHHhcCCeEEcCCcC-HHHHHhccEEcCCC
Confidence 479999988877644 67999999999999999999999996544 44899999998763
No 32
>4ap9_A Phosphoserine phosphatase; hydrolase, haloacid dehalogenase superfamily, NDSB; HET: 1PS; 1.78A {Thermococcus onnurineus} PDB: 4b6j_A
Probab=98.45 E-value=2.4e-07 Score=96.56 Aligned_cols=117 Identities=18% Similarity=0.245 Sum_probs=89.4
Q ss_pred cCCCCcHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcccCCceEEEEeCCCCcccccchhhHHHHHHHHHHHhHHHH
Q 001017 700 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQ 779 (1189)
Q Consensus 700 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 779 (1189)
++.+++.++++.|++.|++++++||+....+..+ +.+|+... ...+.....
T Consensus 79 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~-~~~~~~~~-~~~~~~~~~--------------------------- 129 (201)
T 4ap9_A 79 NVSPEARELVETLREKGFKVVLISGSFEEVLEPF-KELGDEFM-ANRAIFEDG--------------------------- 129 (201)
T ss_dssp CCCHHHHHHHHHHHHTTCEEEEEEEEETTTSGGG-TTTSSEEE-EEEEEEETT---------------------------
T ss_pred CCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHH-HHcCchhh-eeeEEeeCC---------------------------
Confidence 7899999999999999999999999998888888 88886322 111111100
Q ss_pred HhhhhhccccCCCCCCCeEEEEcCchhhhhhhHHHHHHHHHHHhccceeEEEeCCcccHHHHHHHHHhcCCCeEEEEcCC
Q 001017 780 LIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDG 859 (1189)
Q Consensus 780 ~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~~~~~~~~vv~~r~sP~qK~~iV~~l~~~~~~~vl~iGDG 859 (1189)
........|..|...++.+ ....+++|||+
T Consensus 130 -----------------------------------------------~~~~~~~~~~~k~~~l~~l---~~~~~i~iGD~ 159 (201)
T 4ap9_A 130 -----------------------------------------------KFQGIRLRFRDKGEFLKRF---RDGFILAMGDG 159 (201)
T ss_dssp -----------------------------------------------EEEEEECCSSCHHHHHGGG---TTSCEEEEECT
T ss_pred -----------------------------------------------ceECCcCCccCHHHHHHhc---CcCcEEEEeCC
Confidence 0011456678899888888 35789999999
Q ss_pred CCChhhhhhcCeeEEecCCcchhhhhccccccccchhhHHH
Q 001017 860 ANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQFRFLERL 900 (1189)
Q Consensus 860 ~ND~~ml~~A~vGI~i~g~~~~~a~~~sD~~i~~f~~l~~l 900 (1189)
.||++|++.|++||+|.+... .||+++.++.-+..+
T Consensus 160 ~~Di~~~~~ag~~v~~~~~~~-----~ad~v~~~~~el~~~ 195 (201)
T 4ap9_A 160 YADAKMFERADMGIAVGREIP-----GADLLVKDLKELVDF 195 (201)
T ss_dssp TCCHHHHHHCSEEEEESSCCT-----TCSEEESSHHHHHHH
T ss_pred HHHHHHHHhCCceEEECCCCc-----cccEEEccHHHHHHH
Confidence 999999999999999965443 789999887776655
No 33
>1svj_A Potassium-transporting ATPase B chain; alpha-beta sandwich, hydrolase; NMR {Escherichia coli} SCOP: d.220.1.1 PDB: 1u7q_A 2a00_A* 2a29_A*
Probab=98.45 E-value=8.2e-07 Score=87.92 Aligned_cols=106 Identities=18% Similarity=0.373 Sum_probs=77.9
Q ss_pred cCChhHHHHHHHHHHC-CcEEEEecCceeEEEecCCCCCcceeEEEE-EeeeecCCCCCceEEEEEEeCCCeEEEEEecC
Q 001017 533 AESPDEAAFVIAAREL-GFEFYERTQTSISVHELDPVTGTKVERSYS-LLNVLEFSSSRKRMSVIVRSEEGTLLLLSKGA 610 (1189)
Q Consensus 533 ~~sp~e~alv~~a~~~-g~~~~~r~~~~~~v~~~~~~~~~~~~~~~~-il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa 610 (1189)
++||...|++++|++. |..... .. + .....+|++..++..|.+ +| ..+.+|+
T Consensus 49 SeHPla~AIv~~A~~~~~l~~~~--------------------~~-~~~~~~~~F~a~~G~~Gv~v---~G--~~v~vGn 102 (156)
T 1svj_A 49 DETPEGRSIVILAKQRFNLRERD--------------------VQ-SLHATFVPFTAQSRMSGINI---DN--RMIRKGS 102 (156)
T ss_dssp CCSHHHHHHHHHHHHHTTCCCCC--------------------HH-HHTCEEEEEETTTTEEEEEE---TT--EEEEEEE
T ss_pred CCCHHHHHHHHHHHHhcCCCccc--------------------cc-ccccceeeccccCCCCeEEE---CC--EEEEEeC
Confidence 5799999999999976 543211 00 0 012357888777667644 55 3567899
Q ss_pred chHHHHHhhhcchhhHHHHHHHHHHHHhccCeEEEEEEEecCHHHHHHHHHHHHHHhhhhhhcHHHHHHHHHHHHhcCce
Q 001017 611 DSVMFERLAENGREFEEQTKEHINEYADAGLRTLILAYRELDEKEYKQFNEEFTEAKNSVSADREELAEEIAEKIEKNLI 690 (1189)
Q Consensus 611 ~~~i~~~~~~~~~~~~~~~~~~l~~~a~~Glr~l~~a~r~l~~~e~~~~~~~~~~a~~~~~~~~~~~~~~~~~~ie~~l~ 690 (1189)
+..|.+.+...+-...+.+.+.+++++.+|.+++++| .|.+
T Consensus 103 ~~~i~~l~~~~gi~~~~~~~~~~~~la~~G~T~v~VA---------------------------------------~d~~ 143 (156)
T 1svj_A 103 VDAIRRHVEANGGHFPTDVDQKVDQVARQGATPLVVV---------------------------------------EGSR 143 (156)
T ss_dssp HHHHHHHHHHHTCCCCHHHHHHHHHHHHTTCEEEEEE---------------------------------------ETTE
T ss_pred cHHHHHHHHHcCCCCcHHHHHHHHHHHhCCCCEEEEE---------------------------------------ECCE
Confidence 9888877765443444467788899999999999999 5678
Q ss_pred EEEeeeecccCCC
Q 001017 691 LLGATAVEDKLQN 703 (1189)
Q Consensus 691 llG~~~ieD~lr~ 703 (1189)
++|++++.|++|+
T Consensus 144 l~GvIalaD~iK~ 156 (156)
T 1svj_A 144 VLGVIALKDIVKG 156 (156)
T ss_dssp EEEEEEEEECCCC
T ss_pred EEEEEEEecCCCC
Confidence 9999999999996
No 34
>3fzq_A Putative hydrolase; YP_001086940.1, putative haloacid dehalogenase-like hydrolas structural genomics, joint center for structural genomics; HET: MSE; 2.10A {Clostridium difficile} SCOP: c.108.1.0
Probab=98.38 E-value=3.7e-07 Score=100.83 Aligned_cols=59 Identities=19% Similarity=0.284 Sum_probs=48.3
Q ss_pred ccHHHHHHHHHhcC---CCeEEEEcCCCCChhhhhhcCeeEEecCCcchhhhhccccccccch
Q 001017 836 KQKALVTRLVKTKT---SSTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQFR 895 (1189)
Q Consensus 836 ~qK~~iV~~l~~~~---~~~vl~iGDG~ND~~ml~~A~vGI~i~g~~~~~a~~~sD~~i~~f~ 895 (1189)
..|+..++.+.++. .+.+++|||+.||++|++.|++||+|++.. ..++..||++..+..
T Consensus 199 ~~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam~na~-~~~k~~A~~v~~~~~ 260 (274)
T 3fzq_A 199 FHKGKAIKRLQERLGVTQKETICFGDGQNDIVMFQASDVTIAMKNSH-QQLKDIATSICEDIF 260 (274)
T ss_dssp CSHHHHHHHHHHHHTCCSTTEEEECCSGGGHHHHHTCSEEEEETTSC-HHHHHHCSEEECCGG
T ss_pred CCHHHHHHHHHHHcCCCHHHEEEECCChhHHHHHHhcCceEEecCcc-HHHHHhhhheeCCCc
Confidence 36998888877653 367999999999999999999999995544 448899999987633
No 35
>3pgv_A Haloacid dehalogenase-like hydrolase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: EPE; 2.39A {Klebsiella pneumoniae subsp}
Probab=98.36 E-value=5.4e-07 Score=100.25 Aligned_cols=57 Identities=23% Similarity=0.193 Sum_probs=46.6
Q ss_pred eCCc--ccHHHHHHHHHhcCC---CeEEEEcCCCCChhhhhhcCeeEEecCCcchhhhhcccc
Q 001017 832 RSSP--KQKALVTRLVKTKTS---STTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDI 889 (1189)
Q Consensus 832 r~sP--~qK~~iV~~l~~~~~---~~vl~iGDG~ND~~ml~~A~vGI~i~g~~~~~a~~~sD~ 889 (1189)
.+.| ..|+..++.+.++.| +.|++|||+.||++|++.|++||+|++.. ..++++||+
T Consensus 202 ei~~~~~~K~~al~~l~~~lgi~~~~~ia~GD~~NDi~ml~~ag~~vAm~Na~-~~vk~~A~~ 263 (285)
T 3pgv_A 202 EVMAGGVSKGHALEAVAKMLGYTLSDCIAFGDGMNDAEMLSMAGKGCIMANAH-QRLKDLHPE 263 (285)
T ss_dssp EEEETTCSHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSC-HHHHHHCTT
T ss_pred EEecCCCChHHHHHHHHHHhCCCHHHEEEECCcHhhHHHHHhcCCEEEccCCC-HHHHHhCCC
Confidence 3444 469999998887655 68999999999999999999999996544 448899985
No 36
>1rkq_A Hypothetical protein YIDA; two domain structure with beta-alpha sandwich. stucture contains A magnesium ION., PSI, protein structure initiative; 1.40A {Escherichia coli} SCOP: c.108.1.10
Probab=98.35 E-value=4.2e-07 Score=100.97 Aligned_cols=62 Identities=19% Similarity=0.261 Sum_probs=49.4
Q ss_pred EeCCcc--cHHHHHHHHHhcCC---CeEEEEcCCCCChhhhhhcCeeEEecCCcchhhhhcccccccc
Q 001017 831 CRSSPK--QKALVTRLVKTKTS---STTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQ 893 (1189)
Q Consensus 831 ~r~sP~--qK~~iV~~l~~~~~---~~vl~iGDG~ND~~ml~~A~vGI~i~g~~~~~a~~~sD~~i~~ 893 (1189)
.++.|. .|+..++.+.+..| ..++++||+.||++|++.|++||+|.+.. ...+..||+++.+
T Consensus 190 lei~~~~~~K~~~l~~l~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~va~~n~~-~~~~~~a~~v~~~ 256 (282)
T 1rkq_A 190 LEILDKRVNKGTGVKSLADVLGIKPEEIMAIGDQENDIAMIEYAGVGVAVDNAI-PSVKEVANFVTKS 256 (282)
T ss_dssp EEEEETTCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSC-HHHHHHCSEECCC
T ss_pred EEecCCCCCCHHHHHHHHHHhCCCHHHEEEECCcHHHHHHHHHCCcEEEecCCc-HHHHhhCCEEecC
Confidence 345555 79999998876533 57999999999999999999999996543 3367789998865
No 37
>2r8e_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; YRBI, divalent metal, HAD superfamily, KDO 8-P, hydrolase; 1.40A {Escherichia coli O6} PDB: 2r8x_A 2r8y_A 2r8z_A 3hyc_A 3i6b_A*
Probab=98.35 E-value=8.4e-07 Score=92.04 Aligned_cols=97 Identities=12% Similarity=0.126 Sum_probs=74.3
Q ss_pred HHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcccCCceEEEEeCCCCcccccchhhHHHHHHHHHHHhHHHHHhhhhhcc
Q 001017 708 CIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQLIRGKELL 787 (1189)
Q Consensus 708 ~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 787 (1189)
+|+.|+++|+++.++||+....+..+.+.+|+..
T Consensus 61 ~l~~L~~~g~~v~ivT~~~~~~~~~~l~~lgl~~---------------------------------------------- 94 (188)
T 2r8e_A 61 GIRCALTSDIEVAIITGRKAKLVEDRCATLGITH---------------------------------------------- 94 (188)
T ss_dssp HHHHHHTTTCEEEEECSSCCHHHHHHHHHHTCCE----------------------------------------------
T ss_pred HHHHHHHCCCeEEEEeCCChHHHHHHHHHcCCce----------------------------------------------
Confidence 8999999999999999999999999999988731
Q ss_pred ccCCCCCCCeEEEEcCchhhhhhhHHHHHHHHHHHhccceeEEEeCCcccHHHHHHHHHhcCC---CeEEEEcCCCCChh
Q 001017 788 DSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTS---STTLAIGDGANDVG 864 (1189)
Q Consensus 788 ~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~~~~~~~~vv~~r~sP~qK~~iV~~l~~~~~---~~vl~iGDG~ND~~ 864 (1189)
++.. ...|...++.+.+..| +.+++|||+.||++
T Consensus 95 -----------------------------------------~~~~--~kpk~~~~~~~~~~~g~~~~~~~~iGD~~~Di~ 131 (188)
T 2r8e_A 95 -----------------------------------------LYQG--QSNKLIAFSDLLEKLAIAPENVAYVGDDLIDWP 131 (188)
T ss_dssp -----------------------------------------EECS--CSCSHHHHHHHHHHHTCCGGGEEEEESSGGGHH
T ss_pred -----------------------------------------eecC--CCCCHHHHHHHHHHcCCCHHHEEEECCCHHHHH
Confidence 1111 1334445554443223 68999999999999
Q ss_pred hhhhcCeeEEecCCcchhhhhccccccccc
Q 001017 865 MLQEADIGVGISGVEGMQAVMSSDIAIAQF 894 (1189)
Q Consensus 865 ml~~A~vGI~i~g~~~~~a~~~sD~~i~~f 894 (1189)
|.+.|++++++.... ..++..||+++.+.
T Consensus 132 ~a~~ag~~~~~~~~~-~~~~~~ad~v~~~~ 160 (188)
T 2r8e_A 132 VMEKVGLSVAVADAH-PLLIPRADYVTRIA 160 (188)
T ss_dssp HHTTSSEEEECTTSC-TTTGGGSSEECSSC
T ss_pred HHHHCCCEEEecCcC-HHHHhcCCEEEeCC
Confidence 999999999885432 33667899999885
No 38
>2zos_A MPGP, mannosyl-3-phosphoglycerate phosphatase; haloacid dehalogenase like hydrolase, mannosylglycerate, cytoplasm, hydrolase, magnesium; 1.70A {Pyrococcus horikoshii} PDB: 1wzc_A
Probab=98.30 E-value=1.6e-06 Score=94.35 Aligned_cols=58 Identities=19% Similarity=0.180 Sum_probs=46.8
Q ss_pred ccHHHHHHHHHhc----CCCeEEEEcCCCCChhhhhhcCeeEEecCCcchhhhhcccccccc
Q 001017 836 KQKALVTRLVKTK----TSSTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQ 893 (1189)
Q Consensus 836 ~qK~~iV~~l~~~----~~~~vl~iGDG~ND~~ml~~A~vGI~i~g~~~~~a~~~sD~~i~~ 893 (1189)
..|+..++.+.++ ....|++||||.||.+|++.|++||+|++......+..||+++.+
T Consensus 178 ~sKg~al~~l~~~~~~~~~~~viafGD~~NDi~Ml~~ag~~va~gna~~~~~~~~a~~v~~~ 239 (249)
T 2zos_A 178 SDKGKAAKILLDFYKRLGQIESYAVGDSYNDFPMFEVVDKVFIVGSLKHKKAQNVSSIIDVL 239 (249)
T ss_dssp CCHHHHHHHHHHHHHTTSCEEEEEEECSGGGHHHHTTSSEEEEESSCCCTTEEEESSHHHHH
T ss_pred CChHHHHHHHHHHhccCCCceEEEECCCcccHHHHHhCCcEEEeCCCCccccchhceEEecc
Confidence 4699999988875 336899999999999999999999999765433366678888754
No 39
>1l7m_A Phosphoserine phosphatase; rossmann fold, four-helix bundle, B-hairpin, structural genomics, BSGC structure funded by NIH; 1.48A {Methanocaldococcus jannaschii} SCOP: c.108.1.4 PDB: 1f5s_A 1l7n_A 1l7p_A* 1l7o_A* 1j97_A*
Probab=98.30 E-value=8.1e-07 Score=93.36 Aligned_cols=125 Identities=21% Similarity=0.275 Sum_probs=83.6
Q ss_pred cCCCCcHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcccCCceEEEEeCCCCcccccchhhHHHHHHHHHHHhHHHH
Q 001017 700 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQ 779 (1189)
Q Consensus 700 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 779 (1189)
++.+++.++++.|++.|+++.++||+....+..+...+|+...-...+.....
T Consensus 76 ~l~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------------- 128 (211)
T 1l7m_A 76 TPTEGAEETIKELKNRGYVVAVVSGGFDIAVNKIKEKLGLDYAFANRLIVKDG--------------------------- 128 (211)
T ss_dssp CBCTTHHHHHHHHHHTTEEEEEEEEEEHHHHHHHHHHHTCSEEEEEEEEEETT---------------------------
T ss_pred CCCccHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCCCeEEEeeeEEECC---------------------------
Confidence 56789999999999999999999999988888887777762100000000000
Q ss_pred HhhhhhccccCCCCCCCeEEEEcCchhhhhhhHHHHHHHHHHHhccceeEEEe-CCcccHHHHHHHHHhcCC---CeEEE
Q 001017 780 LIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCR-SSPKQKALVTRLVKTKTS---STTLA 855 (1189)
Q Consensus 780 ~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~~~~~~~~vv~~r-~sP~qK~~iV~~l~~~~~---~~vl~ 855 (1189)
.++|. +... +.+..|...+..+.+..| +.+++
T Consensus 129 --------------------~~~~~------------------------~~~~~~~~~~K~~~l~~~~~~lgi~~~~~~~ 164 (211)
T 1l7m_A 129 --------------------KLTGD------------------------VEGEVLKENAKGEILEKIAKIEGINLEDTVA 164 (211)
T ss_dssp --------------------EEEEE------------------------EECSSCSTTHHHHHHHHHHHHHTCCGGGEEE
T ss_pred --------------------EEcCC------------------------cccCccCCccHHHHHHHHHHHcCCCHHHEEE
Confidence 00000 1111 123567766665554333 67999
Q ss_pred EcCCCCChhhhhhcCeeEEecCCcchhhhhcccccccc--chhh
Q 001017 856 IGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQ--FRFL 897 (1189)
Q Consensus 856 iGDG~ND~~ml~~A~vGI~i~g~~~~~a~~~sD~~i~~--f~~l 897 (1189)
|||+.||++|++.|++++++.+.+ ..+..||+++.+ +.-+
T Consensus 165 iGD~~~Di~~~~~ag~~~~~~~~~--~~~~~a~~v~~~~~~~~l 206 (211)
T 1l7m_A 165 VGDGANDISMFKKAGLKIAFCAKP--ILKEKADICIEKRDLREI 206 (211)
T ss_dssp EECSGGGHHHHHHCSEEEEESCCH--HHHTTCSEEECSSCGGGG
T ss_pred EecChhHHHHHHHCCCEEEECCCH--HHHhhcceeecchhHHHH
Confidence 999999999999999999996433 256779998876 4444
No 40
>3r4c_A Hydrolase, haloacid dehalogenase-like hydrolase; haloalkanoate dehalogenase enzyme superfamily, phosphohydrol hydrolase; 1.82A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0
Probab=98.25 E-value=2.1e-06 Score=94.36 Aligned_cols=58 Identities=29% Similarity=0.378 Sum_probs=48.8
Q ss_pred ccHHHHHHHHHhcCC---CeEEEEcCCCCChhhhhhcCeeEEecCCcchhhhhccccccccc
Q 001017 836 KQKALVTRLVKTKTS---STTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQF 894 (1189)
Q Consensus 836 ~qK~~iV~~l~~~~~---~~vl~iGDG~ND~~ml~~A~vGI~i~g~~~~~a~~~sD~~i~~f 894 (1189)
..|+..++.+.++.| +.|+++||+.||++|++.|++||+|.+.. ..++.+||++..+.
T Consensus 193 ~~K~~~l~~l~~~lgi~~~~~ia~GD~~NDi~m~~~ag~~vam~na~-~~~k~~Ad~v~~~~ 253 (268)
T 3r4c_A 193 TSKATGLSLFADYYRVKVSEIMACGDGGNDIPMLKAAGIGVAMGNAS-EKVQSVADFVTDTV 253 (268)
T ss_dssp CCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSC-HHHHHTCSEECCCT
T ss_pred CCHHHHHHHHHHHcCCCHHHEEEECCcHHhHHHHHhCCCeEEeCCCc-HHHHHhcCEeeCCC
Confidence 479999988877644 67999999999999999999999996544 44889999998763
No 41
>3m1y_A Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, phophoserine phosphatase, protein structure initiative, structural genomics; 2.40A {Helicobacter pylori} SCOP: c.108.1.0
Probab=98.25 E-value=1.5e-06 Score=91.89 Aligned_cols=129 Identities=19% Similarity=0.246 Sum_probs=89.2
Q ss_pred ccCCCCcHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcccCCceEEEEeCCCCcccccchhhHHHHHHHHHHHhHHH
Q 001017 699 DKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLH 778 (1189)
Q Consensus 699 D~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 778 (1189)
-++.+++.++++.|++.|+++.++|+.....+..+...+|+...-...+.....
T Consensus 74 ~~~~~~~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~gl~~~f~~~~~~~~~-------------------------- 127 (217)
T 3m1y_A 74 LPLFEGALELVSALKEKNYKVVCFSGGFDLATNHYRDLLHLDAAFSNTLIVEND-------------------------- 127 (217)
T ss_dssp CCBCBTHHHHHHHHHTTTEEEEEEEEEEHHHHHHHHHHHTCSEEEEEEEEEETT--------------------------
T ss_pred CcCCCCHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHHcCcchhccceeEEeCC--------------------------
Confidence 458999999999999999999999999999999999998874311111111100
Q ss_pred HHhhhhhccccCCCCCCCeEEEEcCchhhhhhhHHHHHHHHHHHhccceeEEEeC-CcccHHHHHHHHHhc---CCCeEE
Q 001017 779 QLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRS-SPKQKALVTRLVKTK---TSSTTL 854 (1189)
Q Consensus 779 ~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~~~~~~~~vv~~r~-sP~qK~~iV~~l~~~---~~~~vl 854 (1189)
.++| .+...+ ....|..+++.+.+. ....++
T Consensus 128 ---------------------~~~~------------------------~~~~~~~~~k~k~~~~~~~~~~~g~~~~~~i 162 (217)
T 3m1y_A 128 ---------------------ALNG------------------------LVTGHMMFSHSKGEMLLVLQRLLNISKTNTL 162 (217)
T ss_dssp ---------------------EEEE------------------------EEEESCCSTTHHHHHHHHHHHHHTCCSTTEE
T ss_pred ---------------------EEEe------------------------eeccCCCCCCChHHHHHHHHHHcCCCHhHEE
Confidence 0000 011111 234567766666554 236799
Q ss_pred EEcCCCCChhhhhhcCeeEEecCCcchhhhhccccccccchh--hHHH
Q 001017 855 AIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQFRF--LERL 900 (1189)
Q Consensus 855 ~iGDG~ND~~ml~~A~vGI~i~g~~~~~a~~~sD~~i~~f~~--l~~l 900 (1189)
+|||+.||++|++.|++++++.+.+ ..+..||+++.+.++ +..+
T Consensus 163 ~vGDs~~Di~~a~~aG~~~~~~~~~--~l~~~ad~v~~~~dl~~~~~~ 208 (217)
T 3m1y_A 163 VVGDGANDLSMFKHAHIKIAFNAKE--VLKQHATHCINEPDLALIKPL 208 (217)
T ss_dssp EEECSGGGHHHHTTCSEEEEESCCH--HHHTTCSEEECSSBGGGGTTC
T ss_pred EEeCCHHHHHHHHHCCCeEEECccH--HHHHhcceeecccCHHHHHHH
Confidence 9999999999999999999994333 367889999976443 4444
No 42
>1u02_A Trehalose-6-phosphate phosphatase related protein; structural genomics, PSI; 1.92A {Thermoplasma acidophilum} SCOP: c.108.1.15
Probab=98.22 E-value=2.8e-06 Score=91.75 Aligned_cols=177 Identities=11% Similarity=0.070 Sum_probs=92.6
Q ss_pred cCCCCcHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHc-CcccCCceEEEEeCCCCcccccchhhHHHHHHHHHHHhHHH
Q 001017 700 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFAC-SLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLH 778 (1189)
Q Consensus 700 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~-gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 778 (1189)
.+.+.+.++|++|+++| +++++||+....+..+...+ .++..++..+..+++. ... ........+.......+..
T Consensus 23 ~i~~~~~~al~~l~~~g-~v~iaTGR~~~~~~~~~~~l~~~I~~nGa~i~~~~~~--~~~-~~~~~~~~l~~~~~~~i~~ 98 (239)
T 1u02_A 23 YADAGLLSLISDLKERF-DTYIVTGRSPEEISRFLPLDINMICYHGACSKINGQI--VYN-NGSDRFLGVFDRIYEDTRS 98 (239)
T ss_dssp CCCHHHHHHHHHHHHHS-EEEEECSSCHHHHHHHSCSSCEEEEGGGTEEEETTEE--EEC-TTGGGGHHHHHHHHHHHTT
T ss_pred CCCHHHHHHHHHHhcCC-CEEEEeCCCHHHHHHHhccchheEEECCEEEeeCCee--eec-ccccccchhhHHHHHHHHH
Confidence 46678899999999999 99999999999988887654 2233333322221110 000 0000111121111111111
Q ss_pred HHhhh-hhccccCCCCCCCeEEEEcCchhhhhhh---HHHHHHHHHHHhccce---eEEEeCCcc--cHHHHHHHHHhcC
Q 001017 779 QLIRG-KELLDSSNESLGPLALIIDGKSLTYALE---DDVKDLFLELAIGCAS---VICCRSSPK--QKALVTRLVKTKT 849 (1189)
Q Consensus 779 ~~~~~-~~~~~~~~~~~~~~~lvi~G~~l~~~~~---~~~~~~~~~~~~~~~~---vv~~r~sP~--qK~~iV~~l~~~~ 849 (1189)
.+... ...+... .......-..+..... +.+.+.+... ..... .-+..+.|. .|+..++.+.++.
T Consensus 99 ~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~lei~~~~~~Kg~al~~l~~~~ 172 (239)
T 1u02_A 99 WVSDFPGLRIYRK-----NLAVLYHLGLMGADMKPKLRSRIEEIARI-FGVETYYGKMIIELRVPGVNKGSAIRSVRGER 172 (239)
T ss_dssp HHHHSTTCEEEEE-----TTEEEEECTTSCSTTHHHHHHHHHHHHHH-HTCEEEECSSEEEEECTTCCHHHHHHHHHTTS
T ss_pred HHhhCCCcEEEec-----CCEEEEEcCCCChhHHHHHHHHHHHHhcc-CCcEEEeCCcEEEEEcCCCCHHHHHHHHHhhC
Confidence 11110 0000000 0011111010110001 1122222221 11110 113345554 7999999999866
Q ss_pred CCeEEEEcCCCCChhhhhhc--CeeEEecCCcchhhhhcccccccc
Q 001017 850 SSTTLAIGDGANDVGMLQEA--DIGVGISGVEGMQAVMSSDIAIAQ 893 (1189)
Q Consensus 850 ~~~vl~iGDG~ND~~ml~~A--~vGI~i~g~~~~~a~~~sD~~i~~ 893 (1189)
| |+++||+.||.+||+.| ++||+|.+. +..||+++.+
T Consensus 173 g--via~GD~~ND~~Ml~~a~~g~~vam~Na-----~~~A~~v~~~ 211 (239)
T 1u02_A 173 P--AIIAGDDATDEAAFEANDDALTIKVGEG-----ETHAKFHVAD 211 (239)
T ss_dssp C--EEEEESSHHHHHHHHTTTTSEEEEESSS-----CCCCSEEESS
T ss_pred C--eEEEeCCCccHHHHHHhhCCcEEEECCC-----CCcceEEeCC
Confidence 7 99999999999999999 999999653 5678887765
No 43
>2b30_A Pvivax hypothetical protein; SGPP, structural genomics, PSI, protein structure initiative; 2.70A {Plasmodium vivax} SCOP: c.108.1.10
Probab=98.21 E-value=8.1e-07 Score=99.59 Aligned_cols=60 Identities=15% Similarity=0.217 Sum_probs=48.5
Q ss_pred eCCcc--cHHHHHHHHHhcCC---CeEEEEcCCCCChhhhhhcCeeEEecCCcchhhhhccccccc
Q 001017 832 RSSPK--QKALVTRLVKTKTS---STTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIA 892 (1189)
Q Consensus 832 r~sP~--qK~~iV~~l~~~~~---~~vl~iGDG~ND~~ml~~A~vGI~i~g~~~~~a~~~sD~~i~ 892 (1189)
++.|. .|+..++.+.+..| ..|++|||+.||.+|++.|++||+|++.. ...+..||+++.
T Consensus 217 ei~~~~~~K~~~l~~l~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~va~~na~-~~~k~~a~~v~~ 281 (301)
T 2b30_A 217 EVTKLGHDKYTGINYLLKHYNISNDQVLVVGDAENDIAMLSNFKYSFAVANAT-DSAKSHAKCVLP 281 (301)
T ss_dssp EEEETTCCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHSCSEEEECTTCC-HHHHHHSSEECS
T ss_pred EecCCCCCcHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCCeEEEcCCc-HHHHhhCCEEEc
Confidence 34444 79999998877544 57999999999999999999999996543 336778999887
No 44
>1y8a_A Hypothetical protein AF1437; structural genomics, protein structu initiative, PSI, midwest center for structural genomics; 1.40A {Archaeoglobus fulgidus} SCOP: c.108.1.24
Probab=98.18 E-value=2.2e-06 Score=97.50 Aligned_cols=72 Identities=17% Similarity=0.259 Sum_probs=54.5
Q ss_pred cccHHHHHHHHHhc-CCCeEEEEcCCCCChhhhhhc----CeeEEecCCcchhhhhccccccccc------hhhHHHHHH
Q 001017 835 PKQKALVTRLVKTK-TSSTTLAIGDGANDVGMLQEA----DIGVGISGVEGMQAVMSSDIAIAQF------RFLERLLLV 903 (1189)
Q Consensus 835 P~qK~~iV~~l~~~-~~~~vl~iGDG~ND~~ml~~A----~vGI~i~g~~~~~a~~~sD~~i~~f------~~l~~lll~ 903 (1189)
+.+|+..++.+... ..+.|+++|||.||++|++.| ++||+| +. ...++..||+++.+. ..|..+ +.
T Consensus 205 g~~K~~al~gi~~~~~~~~via~GDs~NDi~ml~~A~~~~g~~vam-na-~~~lk~~Ad~v~~~~~~dGV~~~l~~~-~~ 281 (332)
T 1y8a_A 205 AGEKAKIMRGYCESKGIDFPVVVGDSISDYKMFEAARGLGGVAIAF-NG-NEYALKHADVVIISPTAMSEAKVIELF-ME 281 (332)
T ss_dssp HHHHHHHHHHHHHHHTCSSCEEEECSGGGHHHHHHHHHTTCEEEEE-SC-CHHHHTTCSEEEECSSTHHHHHHHHHH-HH
T ss_pred CCCHHHHHhccChhhcCceEEEEeCcHhHHHHHHHHhhcCCeEEEe-cC-CHHHHhhCcEEecCCCCCHHHHHHHHH-HH
Confidence 56799888866541 114599999999999999999 999999 54 344888999998762 224444 67
Q ss_pred hhhhhh
Q 001017 904 HGHWCY 909 (1189)
Q Consensus 904 ~GR~~~ 909 (1189)
.||..+
T Consensus 282 ~~~~~~ 287 (332)
T 1y8a_A 282 RKERAF 287 (332)
T ss_dssp HGGGGG
T ss_pred cCCchh
Confidence 888777
No 45
>3p96_A Phosphoserine phosphatase SERB; ssgcid, structural genomics, structural genomics center for infectious disease, hydrolas; 2.05A {Mycobacterium avium}
Probab=98.17 E-value=2.3e-06 Score=100.67 Aligned_cols=122 Identities=20% Similarity=0.270 Sum_probs=86.7
Q ss_pred cCCCCcHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcccCCceEEEEeCCCCcccccchhhHHHHHHHHHHHhHHHH
Q 001017 700 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQ 779 (1189)
Q Consensus 700 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 779 (1189)
++.||+.++++.|++.|+++.++||.....+..+++.+|+...-...+.+...
T Consensus 256 ~~~pg~~e~l~~Lk~~G~~~~ivS~~~~~~~~~~~~~lgl~~~~~~~l~~~dg--------------------------- 308 (415)
T 3p96_A 256 ELMPGARTTLRTLRRLGYACGVVSGGFRRIIEPLAEELMLDYVAANELEIVDG--------------------------- 308 (415)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCSEEEEECEEEETT---------------------------
T ss_pred ccCccHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCccceeeeeEEEeCC---------------------------
Confidence 79999999999999999999999999999999999999984211010100000
Q ss_pred HhhhhhccccCCCCCCCeEEEEcCchhhhhhhHHHHHHHHHHHhccceeEEEeCCcccHHHHHHHHHhcCC---CeEEEE
Q 001017 780 LIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTS---STTLAI 856 (1189)
Q Consensus 780 ~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~~~~~~~~vv~~r~sP~qK~~iV~~l~~~~~---~~vl~i 856 (1189)
.++|.... .-..++.|..+++.+.+..| +.+++|
T Consensus 309 --------------------~~tg~~~~-----------------------~v~~~kpk~~~~~~~~~~~gi~~~~~i~v 345 (415)
T 3p96_A 309 --------------------TLTGRVVG-----------------------PIIDRAGKATALREFAQRAGVPMAQTVAV 345 (415)
T ss_dssp --------------------EEEEEECS-----------------------SCCCHHHHHHHHHHHHHHHTCCGGGEEEE
T ss_pred --------------------EEEeeEcc-----------------------CCCCCcchHHHHHHHHHHcCcChhhEEEE
Confidence 11111000 00124567777776655433 679999
Q ss_pred cCCCCChhhhhhcCeeEEecCCcchhhhhcccccccc
Q 001017 857 GDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQ 893 (1189)
Q Consensus 857 GDG~ND~~ml~~A~vGI~i~g~~~~~a~~~sD~~i~~ 893 (1189)
|||.||++|++.|++|+++.+.+. .+..||+++..
T Consensus 346 GD~~~Di~~a~~aG~~va~~~~~~--~~~~ad~~i~~ 380 (415)
T 3p96_A 346 GDGANDIDMLAAAGLGIAFNAKPA--LREVADASLSH 380 (415)
T ss_dssp ECSGGGHHHHHHSSEEEEESCCHH--HHHHCSEEECS
T ss_pred ECCHHHHHHHHHCCCeEEECCCHH--HHHhCCEEEcc
Confidence 999999999999999999944333 67889999875
No 46
>3kd3_A Phosphoserine phosphohydrolase-like protein; csgid, niaid, S genomics, national institute of allergy and infectious DISE (niaid); 1.70A {Francisella tularensis subsp}
Probab=98.16 E-value=2.2e-06 Score=90.41 Aligned_cols=134 Identities=17% Similarity=0.237 Sum_probs=86.7
Q ss_pred cCCCCcHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcccCCceEEEEeCCCCcccccchhhHHHHHHHHHHHhHHHH
Q 001017 700 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQ 779 (1189)
Q Consensus 700 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 779 (1189)
.+.+++.++++.|++.|+++.++||.....+..+.+.+|+.... .+..
T Consensus 82 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~~~~~~~~~~~--~~~~------------------------------ 129 (219)
T 3kd3_A 82 LLTDGIKELVQDLKNKGFEIWIFSGGLSESIQPFADYLNIPREN--IFAV------------------------------ 129 (219)
T ss_dssp TBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCCGGG--EEEE------------------------------
T ss_pred cCChhHHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHcCCCccc--EEEe------------------------------
Confidence 37899999999999999999999999999999999999884211 1000
Q ss_pred HhhhhhccccCCCCCCCeEEEEcCchhhhhhhHHHHHHHHHHHhccceeEEEeCCcccHHHHHHHHHhcCCCeEEEEcCC
Q 001017 780 LIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDG 859 (1189)
Q Consensus 780 ~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~~~~~~~~vv~~r~sP~qK~~iV~~l~~~~~~~vl~iGDG 859 (1189)
.+++++.... ..+.....+|..|...+........+.+++|||+
T Consensus 130 ------------------~~~~~~~~~~------------------~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~vGD~ 173 (219)
T 3kd3_A 130 ------------------ETIWNSDGSF------------------KELDNSNGACDSKLSAFDKAKGLIDGEVIAIGDG 173 (219)
T ss_dssp ------------------EEEECTTSBE------------------EEEECTTSTTTCHHHHHHHHGGGCCSEEEEEESS
T ss_pred ------------------eeeecCCCce------------------eccCCCCCCcccHHHHHHHHhCCCCCCEEEEECC
Confidence 0011000000 0011122345566655554422256889999999
Q ss_pred CCChhhhhh--cCeeEEec-CCcchhhhhccccccccchhhHHHH
Q 001017 860 ANDVGMLQE--ADIGVGIS-GVEGMQAVMSSDIAIAQFRFLERLL 901 (1189)
Q Consensus 860 ~ND~~ml~~--A~vGI~i~-g~~~~~a~~~sD~~i~~f~~l~~ll 901 (1189)
.||++|+++ +.+||++. ++.....+..||+++.++.-+..+|
T Consensus 174 ~~Di~~~~~G~~~~~v~~~~~~~~~~~~~~ad~v~~~~~el~~~l 218 (219)
T 3kd3_A 174 YTDYQLYEKGYATKFIAYMEHIEREKVINLSKYVARNVAELASLI 218 (219)
T ss_dssp HHHHHHHHHTSCSEEEEECSSCCCHHHHHHCSEEESSHHHHHHHH
T ss_pred HhHHHHHhCCCCcEEEeccCccccHHHHhhcceeeCCHHHHHHhh
Confidence 999999965 22455443 2233335678999999887777653
No 47
>4eze_A Haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 2.27A {Salmonella enterica subsp}
Probab=98.13 E-value=3.2e-06 Score=95.17 Aligned_cols=120 Identities=18% Similarity=0.195 Sum_probs=82.6
Q ss_pred cCCCCcHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcccCCceEEEEeCCCCcccccchhhHHHHHHHHHHHhHHHH
Q 001017 700 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQ 779 (1189)
Q Consensus 700 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 779 (1189)
++.||+.++++.|+++|+++.++||.....+..+.+.+|+...-...+.....
T Consensus 179 ~l~pg~~e~L~~Lk~~G~~v~IvSn~~~~~~~~~l~~lgl~~~f~~~l~~~dg--------------------------- 231 (317)
T 4eze_A 179 TLSPGLLTILPVIKAKGFKTAIISGGLDIFTQRLKARYQLDYAFSNTVEIRDN--------------------------- 231 (317)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCSEEEEECEEEETT---------------------------
T ss_pred EECcCHHHHHHHHHhCCCEEEEEeCccHHHHHHHHHHcCCCeEEEEEEEeeCC---------------------------
Confidence 48999999999999999999999999999999999999984211111111100
Q ss_pred HhhhhhccccCCCCCCCeEEEEcCchhhhhhhHHHHHHHHHHHhccceeEEEe-CCcccHHHHHHHHHhc---CCCeEEE
Q 001017 780 LIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCR-SSPKQKALVTRLVKTK---TSSTTLA 855 (1189)
Q Consensus 780 ~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~~~~~~~~vv~~r-~sP~qK~~iV~~l~~~---~~~~vl~ 855 (1189)
.++|. +... ..++.|..+++.+.+. ....+++
T Consensus 232 --------------------~~tg~------------------------i~~~~~~~kpkp~~~~~~~~~lgv~~~~~i~ 267 (317)
T 4eze_A 232 --------------------VLTDN------------------------ITLPIMNAANKKQTLVDLAARLNIATENIIA 267 (317)
T ss_dssp --------------------EEEEE------------------------ECSSCCCHHHHHHHHHHHHHHHTCCGGGEEE
T ss_pred --------------------eeeee------------------------EecccCCCCCCHHHHHHHHHHcCCCcceEEE
Confidence 00000 0000 1234566666555443 2368999
Q ss_pred EcCCCCChhhhhhcCeeEEecCCcchhhhhccccccc
Q 001017 856 IGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIA 892 (1189)
Q Consensus 856 iGDG~ND~~ml~~A~vGI~i~g~~~~~a~~~sD~~i~ 892 (1189)
|||+.||++|.+.|++|+++.+.+. .+..||.++.
T Consensus 268 VGDs~~Di~aa~~AG~~va~~~~~~--~~~~a~~~i~ 302 (317)
T 4eze_A 268 CGDGANDLPMLEHAGTGIAWKAKPV--VREKIHHQIN 302 (317)
T ss_dssp EECSGGGHHHHHHSSEEEEESCCHH--HHHHCCEEES
T ss_pred EeCCHHHHHHHHHCCCeEEeCCCHH--HHHhcCeeeC
Confidence 9999999999999999999943333 5667787764
No 48
>1rlm_A Phosphatase; HAD family, rossman fold, hydrolase; 1.90A {Escherichia coli} SCOP: c.108.1.10 PDB: 1rlt_A 1rlo_A* 2hf2_A
Probab=98.10 E-value=1.3e-05 Score=88.41 Aligned_cols=58 Identities=21% Similarity=0.176 Sum_probs=47.6
Q ss_pred ccHHHHHHHHHhcCC---CeEEEEcCCCCChhhhhhcCeeEEecCCcchhhhhccccccccc
Q 001017 836 KQKALVTRLVKTKTS---STTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQF 894 (1189)
Q Consensus 836 ~qK~~iV~~l~~~~~---~~vl~iGDG~ND~~ml~~A~vGI~i~g~~~~~a~~~sD~~i~~f 894 (1189)
..|...++.+.+..| ..++++||+.||.+|++.|++||+|.+.. ...+..||+++.+.
T Consensus 190 ~~K~~~~~~l~~~l~i~~~~~~~~GD~~nD~~m~~~ag~~va~~na~-~~~k~~a~~v~~~~ 250 (271)
T 1rlm_A 190 LHKANGISRLLKRWDLSPQNVVAIGDSGNDAEMLKMARYSFAMGNAA-ENIKQIARYATDDN 250 (271)
T ss_dssp CSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHCSEEEECTTCC-HHHHHHCSEECCCG
T ss_pred CChHHHHHHHHHHhCCCHHHEEEECCcHHHHHHHHHcCCeEEeCCcc-HHHHHhCCeeCcCC
Confidence 379999988876533 67999999999999999999999996543 34678899998763
No 49
>3zx4_A MPGP, mannosyl-3-phosphoglycerate phosphatase; hydrolase, haloalkanoid acid dehalogenase-like phosphatase, crystallographic snapshot; HET: 2M8; 1.74A {Thermus thermophilus} PDB: 3zty_A 3zu6_A* 3ztw_A* 3zw7_A* 3zwd_A* 3zwk_A 3zup_A* 3zx5_A*
Probab=98.09 E-value=1.5e-05 Score=87.21 Aligned_cols=54 Identities=15% Similarity=0.239 Sum_probs=44.7
Q ss_pred ccHHHHHHHHHhcCC-----CeEEEEcCCCCChhhhhhcCeeEEecCCcchhhhhcccccccc
Q 001017 836 KQKALVTRLVKTKTS-----STTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQ 893 (1189)
Q Consensus 836 ~qK~~iV~~l~~~~~-----~~vl~iGDG~ND~~ml~~A~vGI~i~g~~~~~a~~~sD~~i~~ 893 (1189)
..|...++.+.+..| ..++++||+.||.+|++.|++||+|.+... . .++++...
T Consensus 175 ~~K~~~l~~l~~~~~i~~~~~~~~~~GD~~nD~~m~~~ag~~va~~na~~--~--~~~~~~~~ 233 (259)
T 3zx4_A 175 ADKGRAVARLRALWPDPEEARFAVGLGDSLNDLPLFRAVDLAVYVGRGDP--P--EGVLATPA 233 (259)
T ss_dssp CCHHHHHHHHHHTCSSHHHHTSEEEEESSGGGHHHHHTSSEEEECSSSCC--C--TTCEECSS
T ss_pred CCHHHHHHHHHHHhCCCCCCceEEEEeCCHHHHHHHHhCCCeEEeCChhh--c--CCcEEeCC
Confidence 589999998877654 679999999999999999999999976554 2 66777654
No 50
>3m9l_A Hydrolase, haloacid dehalogenase-like family; HAD family hydrolase, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Pseudomonas fluorescens} PDB: 2ybd_A* 3r09_A*
Probab=98.06 E-value=6e-06 Score=86.52 Aligned_cols=124 Identities=21% Similarity=0.120 Sum_probs=87.3
Q ss_pred ccCCCCcHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcccCC--ceEEEEeCCCCcccccchhhHHHHHHHHHHHhH
Q 001017 699 DKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQG--MRQVIISSETPESKTLEKSEDKSAAAAALKASV 776 (1189)
Q Consensus 699 D~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~--~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 776 (1189)
-++.+++.++++.|++.|+++.++|+.....+..+...+|+...- ..
T Consensus 69 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~------------------------------- 117 (205)
T 3m9l_A 69 SRPAPGAVELVRELAGRGYRLGILTRNARELAHVTLEAIGLADCFAEAD------------------------------- 117 (205)
T ss_dssp EEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGSCGGG-------------------------------
T ss_pred CCCCccHHHHHHHHHhcCCeEEEEeCCchHHHHHHHHHcCchhhcCcce-------------------------------
Confidence 356799999999999999999999999999999888888874211 00
Q ss_pred HHHHhhhhhccccCCCCCCCeEEEEcCchhhhhhhHHHHHHHHHHHhccceeEEEeCCc--ccHHHHHHHHHhc---CCC
Q 001017 777 LHQLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSP--KQKALVTRLVKTK---TSS 851 (1189)
Q Consensus 777 ~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~~~~~~~~vv~~r~sP--~qK~~iV~~l~~~---~~~ 851 (1189)
+++.-.. .-|..+++.+.+. ...
T Consensus 118 ----------------------------------------------------i~~~~~~~~kp~~~~~~~~~~~~g~~~~ 145 (205)
T 3m9l_A 118 ----------------------------------------------------VLGRDEAPPKPHPGGLLKLAEAWDVSPS 145 (205)
T ss_dssp ----------------------------------------------------EECTTTSCCTTSSHHHHHHHHHTTCCGG
T ss_pred ----------------------------------------------------EEeCCCCCCCCCHHHHHHHHHHcCCCHH
Confidence 1111001 1122233322222 336
Q ss_pred eEEEEcCCCCChhhhhhcCe-eEEecCCcchhhhhccccccccchhhHHHHHHhhh
Q 001017 852 TTLAIGDGANDVGMLQEADI-GVGISGVEGMQAVMSSDIAIAQFRFLERLLLVHGH 906 (1189)
Q Consensus 852 ~vl~iGDG~ND~~ml~~A~v-GI~i~g~~~~~a~~~sD~~i~~f~~l~~lll~~GR 906 (1189)
.+++|||+.||+.|.+.|++ +|+|..... ..+..||+++.++.-|..++=.+++
T Consensus 146 ~~i~iGD~~~Di~~a~~aG~~~i~v~~~~~-~~~~~ad~v~~~~~el~~~~~~~~~ 200 (205)
T 3m9l_A 146 RMVMVGDYRFDLDCGRAAGTRTVLVNLPDN-PWPELTDWHARDCAQLRDLLSAEGH 200 (205)
T ss_dssp GEEEEESSHHHHHHHHHHTCEEEECSSSSC-SCGGGCSEECSSHHHHHHHHHHTTC
T ss_pred HEEEECCCHHHHHHHHHcCCEEEEEeCCCC-cccccCCEEeCCHHHHHHHHHhccc
Confidence 89999999999999999999 999964433 2567799999998888777433333
No 51
>4ex6_A ALNB; modified rossman fold, phosphatase, magnesium binding, hydro; 1.25A {Streptomyces SP} PDB: 4ex7_A
Probab=98.05 E-value=3.3e-06 Score=90.62 Aligned_cols=129 Identities=23% Similarity=0.258 Sum_probs=85.4
Q ss_pred ccCCCCcHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcccCCceEEEEeCCCCcccccchhhHHHHHHHHHHHhHHH
Q 001017 699 DKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLH 778 (1189)
Q Consensus 699 D~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 778 (1189)
.++.+++.++++.|++.|+++.++|+.....+..+...+|+...-..
T Consensus 103 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~--------------------------------- 149 (237)
T 4ex6_A 103 RLLYPGVLEGLDRLSAAGFRLAMATSKVEKAARAIAELTGLDTRLTV--------------------------------- 149 (237)
T ss_dssp GGBCTTHHHHHHHHHHTTEEEEEECSSCHHHHHHHHHHHTGGGTCSE---------------------------------
T ss_pred CccCCCHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCchhheee---------------------------------
Confidence 45789999999999999999999999999988888888887432111
Q ss_pred HHhhhhhccccCCCCCCCeEEEEcCchhhhhhhHHHHHHHHHHHhccceeEEEeCCcccHHHHHHHHHhcCCCeEEEEcC
Q 001017 779 QLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGD 858 (1189)
Q Consensus 779 ~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~~~~~~~~vv~~r~sP~qK~~iV~~l~~~~~~~vl~iGD 858 (1189)
++.++... ...-.|+--..+.+.+.- ....+++|||
T Consensus 150 ---------------------~~~~~~~~----------------------~~kp~~~~~~~~~~~lg~-~~~~~i~vGD 185 (237)
T 4ex6_A 150 ---------------------IAGDDSVE----------------------RGKPHPDMALHVARGLGI-PPERCVVIGD 185 (237)
T ss_dssp ---------------------EECTTTSS----------------------SCTTSSHHHHHHHHHHTC-CGGGEEEEES
T ss_pred ---------------------EEeCCCCC----------------------CCCCCHHHHHHHHHHcCC-CHHHeEEEcC
Confidence 11111100 000011111223333322 3478999999
Q ss_pred CCCChhhhhhcCe---eEEecCCcchhhhh-ccccccccchhhHHHHHHhh
Q 001017 859 GANDVGMLQEADI---GVGISGVEGMQAVM-SSDIAIAQFRFLERLLLVHG 905 (1189)
Q Consensus 859 G~ND~~ml~~A~v---GI~i~g~~~~~a~~-~sD~~i~~f~~l~~lll~~G 905 (1189)
+.||+.|.+.|++ +|+++.......+. .+|+++.++.-|..+ +..|
T Consensus 186 ~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~v~~~~~el~~~-l~~~ 235 (237)
T 4ex6_A 186 GVPDAEMGRAAGMTVIGVSYGVSGPDELMRAGADTVVDSFPAAVTA-VLDG 235 (237)
T ss_dssp SHHHHHHHHHTTCEEEEESSSSSCHHHHHHTTCSEEESSHHHHHHH-HHHC
T ss_pred CHHHHHHHHHCCCeEEEEecCCCCHHHHHhcCCCEEECCHHHHHHH-HHcc
Confidence 9999999999999 66664333222333 799999998888776 4444
No 52
>1nf2_A Phosphatase; structural proteomics, HAD NEW fold, structural genomics, BSGC structure funded by NIH structure initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.108.1.10
Probab=98.02 E-value=2.2e-06 Score=94.42 Aligned_cols=61 Identities=25% Similarity=0.371 Sum_probs=48.6
Q ss_pred eCCcc--cHHHHHHHHHhcCC---CeEEEEcCCCCChhhhhhcCeeEEecCCcchhhhhcccccccc
Q 001017 832 RSSPK--QKALVTRLVKTKTS---STTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQ 893 (1189)
Q Consensus 832 r~sP~--qK~~iV~~l~~~~~---~~vl~iGDG~ND~~ml~~A~vGI~i~g~~~~~a~~~sD~~i~~ 893 (1189)
.+.|. .|...++.+.+..| ..++++||+.||++|++.|++|++|.+. ....+..||+++.+
T Consensus 183 ei~~~~~~K~~~~~~~~~~~~~~~~~~~~~GD~~nD~~~~~~ag~~v~~~n~-~~~~~~~a~~v~~~ 248 (268)
T 1nf2_A 183 EIVPKNVDKGKALRFLRERMNWKKEEIVVFGDNENDLFMFEEAGLRVAMENA-IEKVKEASDIVTLT 248 (268)
T ss_dssp EEECTTCCHHHHHHHHHHHHTCCGGGEEEEECSHHHHHHHTTCSEEEECTTS-CHHHHHHCSEECCC
T ss_pred EEeCCCCChHHHHHHHHHHcCCCHHHeEEEcCchhhHHHHHHcCCEEEecCC-CHHHHhhCCEEEcc
Confidence 44554 79998888876533 6799999999999999999999999644 33467789998865
No 53
>1rku_A Homoserine kinase; phosphoserine phosphatase, phosphoserine:homoserine phosphotransferase, THRH, phosphoserine phosphoryl donor; 1.47A {Pseudomonas aeruginosa} SCOP: c.108.1.11 PDB: 1rkv_A
Probab=98.02 E-value=2.2e-05 Score=82.17 Aligned_cols=124 Identities=19% Similarity=0.179 Sum_probs=88.1
Q ss_pred cCCCCcHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcccCCceEEEEeCCCCcccccchhhHHHHHHHHHHHhHHHH
Q 001017 700 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQ 779 (1189)
Q Consensus 700 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 779 (1189)
++.+|+.++++.|++. +++.++|+.....+..+.+.+|+...-...+.....
T Consensus 69 ~~~~g~~~~l~~l~~~-~~~~i~s~~~~~~~~~~l~~~gl~~~f~~~~~~~~~--------------------------- 120 (206)
T 1rku_A 69 KPLEGAVEFVDWLRER-FQVVILSDTFYEFSQPLMRQLGFPTLLCHKLEIDDS--------------------------- 120 (206)
T ss_dssp CCCTTHHHHHHHHHTT-SEEEEEEEEEHHHHHHHHHHTTCCCEEEEEEEECTT---------------------------
T ss_pred CCCccHHHHHHHHHhc-CcEEEEECChHHHHHHHHHHcCCcceecceeEEcCC---------------------------
Confidence 5789999999999999 999999999999999999999974210000111000
Q ss_pred HhhhhhccccCCCCCCCeEEEEcCchhhhhhhHHHHHHHHHHHhccceeEEE-eCCcccHHHHHHHHHhcCCCeEEEEcC
Q 001017 780 LIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICC-RSSPKQKALVTRLVKTKTSSTTLAIGD 858 (1189)
Q Consensus 780 ~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~~~~~~~~vv~~-r~sP~qK~~iV~~l~~~~~~~vl~iGD 858 (1189)
. . .... .-.|..|...++.+.. ....+++|||
T Consensus 121 --------------------------~-------------------~-~~~~~~p~p~~~~~~l~~l~~-~~~~~~~iGD 153 (206)
T 1rku_A 121 --------------------------D-------------------R-VVGYQLRQKDPKRQSVIAFKS-LYYRVIAAGD 153 (206)
T ss_dssp --------------------------S-------------------C-EEEEECCSSSHHHHHHHHHHH-TTCEEEEEEC
T ss_pred --------------------------c-------------------e-EEeeecCCCchHHHHHHHHHh-cCCEEEEEeC
Confidence 0 0 0011 2567889999998876 6789999999
Q ss_pred CCCChhhhhhcCeeEEecCCcchhhhh-ccccc-cccchhhHHH
Q 001017 859 GANDVGMLQEADIGVGISGVEGMQAVM-SSDIA-IAQFRFLERL 900 (1189)
Q Consensus 859 G~ND~~ml~~A~vGI~i~g~~~~~a~~-~sD~~-i~~f~~l~~l 900 (1189)
+.||+.|.+.|++++.+...+. .+. +.+++ +.++.-+..+
T Consensus 154 ~~~Di~~a~~aG~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~ 195 (206)
T 1rku_A 154 SYNDTTMLSEAHAGILFHAPEN--VIREFPQFPAVHTYEDLKRE 195 (206)
T ss_dssp SSTTHHHHHHSSEEEEESCCHH--HHHHCTTSCEECSHHHHHHH
T ss_pred ChhhHHHHHhcCccEEECCcHH--HHHHHhhhccccchHHHHHH
Confidence 9999999999999998843332 333 44554 5566555554
No 54
>1te2_A Putative phosphatase; structural genomics, phosphates, PSI, protein S initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Escherichia coli} SCOP: c.108.1.6
Probab=98.01 E-value=1.3e-05 Score=84.94 Aligned_cols=119 Identities=13% Similarity=0.080 Sum_probs=80.4
Q ss_pred cCCCCcHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcccCCceEEEEeCCCCcccccchhhHHHHHHHHHHHhHHHH
Q 001017 700 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQ 779 (1189)
Q Consensus 700 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 779 (1189)
.+.+++.++++.|++.|++++++|+.....+..+....|+...-...
T Consensus 94 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~~~~~~~~~--------------------------------- 140 (226)
T 1te2_A 94 PLLPGVREAVALCKEQGLLVGLASASPLHMLEKVLTMFDLRDSFDAL--------------------------------- 140 (226)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSEE---------------------------------
T ss_pred CcCccHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhcCcHhhCcEE---------------------------------
Confidence 45799999999999999999999999988887777777763211111
Q ss_pred HhhhhhccccCCCCCCCeEEEEcCchhhhhhhHHHHHHHHHHHhccceeEEEeCCcccH--HHHHHHHHhc---CCCeEE
Q 001017 780 LIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQK--ALVTRLVKTK---TSSTTL 854 (1189)
Q Consensus 780 ~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~~~~~~~~vv~~r~sP~qK--~~iV~~l~~~---~~~~vl 854 (1189)
+++...+..| ...++.+.+. ....++
T Consensus 141 -------------------------------------------------~~~~~~~~~kp~~~~~~~~~~~~~i~~~~~i 171 (226)
T 1te2_A 141 -------------------------------------------------ASAEKLPYSKPHPQVYLDCAAKLGVDPLTCV 171 (226)
T ss_dssp -------------------------------------------------EECTTSSCCTTSTHHHHHHHHHHTSCGGGEE
T ss_pred -------------------------------------------------EeccccCCCCCChHHHHHHHHHcCCCHHHeE
Confidence 1111111111 2233322222 346899
Q ss_pred EEcCCCCChhhhhhcCeeEEecCCc---chhhhhccccccccchhhHHH
Q 001017 855 AIGDGANDVGMLQEADIGVGISGVE---GMQAVMSSDIAIAQFRFLERL 900 (1189)
Q Consensus 855 ~iGDG~ND~~ml~~A~vGI~i~g~~---~~~a~~~sD~~i~~f~~l~~l 900 (1189)
+|||+.||++|++.|++++++-... ....+..||+++.++.-+...
T Consensus 172 ~iGD~~nDi~~a~~aG~~~~~~~~~~~~~~~~~~~a~~v~~~~~el~~~ 220 (226)
T 1te2_A 172 ALEDSVNGMIASKAARMRSIVVPAPEAQNDPRFVLANVKLSSLTELTAK 220 (226)
T ss_dssp EEESSHHHHHHHHHTTCEEEECCCTTTTTCGGGGGSSEECSCGGGCCHH
T ss_pred EEeCCHHHHHHHHHcCCEEEEEcCCCCcccccccccCeEECCHHHHhHH
Confidence 9999999999999999999882221 112467899999887765544
No 55
>3fvv_A Uncharacterized protein; unknown function, structural genomics, PSI,MCSG, protein STR initiative, midwest center for structural genomics; 2.10A {Bordetella pertussis}
Probab=97.99 E-value=1.4e-05 Score=85.44 Aligned_cols=41 Identities=15% Similarity=0.025 Sum_probs=38.9
Q ss_pred cCCCCcHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcc
Q 001017 700 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLL 740 (1189)
Q Consensus 700 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~ 740 (1189)
.+.+|+.++++.|++.|+++.++||.....+..+++.+|+.
T Consensus 92 ~~~~g~~~~l~~l~~~g~~~~ivS~~~~~~~~~~~~~~g~~ 132 (232)
T 3fvv_A 92 SLTVQAVDVVRGHLAAGDLCALVTATNSFVTAPIARAFGVQ 132 (232)
T ss_dssp GCCHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCC
T ss_pred hcCHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCC
Confidence 57999999999999999999999999999999999999984
No 56
>1nnl_A L-3-phosphoserine phosphatase; PSP, HPSP, phospho-aspartyl, hydrolase; 1.53A {Homo sapiens} SCOP: c.108.1.4 PDB: 1l8l_A* 1l8o_A
Probab=97.99 E-value=8.5e-06 Score=86.77 Aligned_cols=131 Identities=19% Similarity=0.220 Sum_probs=87.5
Q ss_pred ccCCCCcHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcccCCceEEEEeCCCCcccccchhhHHHHHHHHHHHhHHH
Q 001017 699 DKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLH 778 (1189)
Q Consensus 699 D~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 778 (1189)
-++.||+.++++.|+++|++++++||.....+..+.+.+|+.... .+...
T Consensus 85 ~~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~~--~f~~~---------------------------- 134 (225)
T 1nnl_A 85 PHLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVASKLNIPATN--VFANR---------------------------- 134 (225)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCCGGG--EEEEC----------------------------
T ss_pred CCCCccHHHHHHHHHHCCCcEEEEeCChHHHHHHHHHHcCCCccc--EEeee----------------------------
Confidence 368999999999999999999999999999999999999984210 11000
Q ss_pred HHhhhhhccccCCCCCCCeEEEEcCchhhhhhhHHHHHHHHHHHhccceeEEEeC-----CcccHHHHHHHHHhcCC-Ce
Q 001017 779 QLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRS-----SPKQKALVTRLVKTKTS-ST 852 (1189)
Q Consensus 779 ~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~~~~~~~~vv~~r~-----sP~qK~~iV~~l~~~~~-~~ 852 (1189)
+..+.. ..+..... .+..|..+++.+.+..| ..
T Consensus 135 --------------------~~~~~~---------------------~~~~~~~~~~~~~~~~~Kp~~~~~~~~~~~~~~ 173 (225)
T 1nnl_A 135 --------------------LKFYFN---------------------GEYAGFDETQPTAESGGKGKVIKLLKEKFHFKK 173 (225)
T ss_dssp --------------------EEECTT---------------------SCEEEECTTSGGGSTTHHHHHHHHHHHHHCCSC
T ss_pred --------------------EEEcCC---------------------CcEecCCCCCcccCCCchHHHHHHHHHHcCCCc
Confidence 000000 00011111 12356666665544333 67
Q ss_pred EEEEcCCCCChhhhhhcCeeEEecCCc-chhhhhccccccccchhhHHH
Q 001017 853 TLAIGDGANDVGMLQEADIGVGISGVE-GMQAVMSSDIAIAQFRFLERL 900 (1189)
Q Consensus 853 vl~iGDG~ND~~ml~~A~vGI~i~g~~-~~~a~~~sD~~i~~f~~l~~l 900 (1189)
+++|||+.||+.|.++|+++|++.... .......+|+++.++.-+..+
T Consensus 174 ~~~vGDs~~Di~~a~~ag~~i~~~~~~~~~~~~~~~~~~~~~~~el~~~ 222 (225)
T 1nnl_A 174 IIMIGDGATDMEACPPADAFIGFGGNVIRQQVKDNAKWYITDFVELLGE 222 (225)
T ss_dssp EEEEESSHHHHTTTTTSSEEEEECSSCCCHHHHHHCSEEESCGGGGCC-
T ss_pred EEEEeCcHHhHHHHHhCCeEEEecCccccHHHHhcCCeeecCHHHHHHH
Confidence 999999999999999999988885432 122345689998887765544
No 57
>1wr8_A Phosphoglycolate phosphatase; alpha / beta core domain, HAD superfamily, structural genomi structural genomics/proteomics initiative, RSGI; 1.60A {Pyrococcus horikoshii} SCOP: c.108.1.10
Probab=97.97 E-value=3.7e-05 Score=82.37 Aligned_cols=178 Identities=13% Similarity=0.134 Sum_probs=95.3
Q ss_pred ccCCCCcHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcccCCceEEEEeCCC----C---cccccchhhHHHHHHHH
Q 001017 699 DKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSET----P---ESKTLEKSEDKSAAAAA 771 (1189)
Q Consensus 699 D~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~----~---~~~~~~~~~~~~~~~~~ 771 (1189)
..+.+.+.+++++|+++|++++++||+....+..+...+|+.. ..+..++.. . ....+ +.....++..
T Consensus 19 ~~i~~~~~~al~~l~~~G~~v~i~TGR~~~~~~~~~~~l~~~~---~~i~~nGa~i~~~~~~~~~~~l--~~~~~i~~~~ 93 (231)
T 1wr8_A 19 RMIHEKALEAIRRAESLGIPIMLVTGNTVQFAEAASILIGTSG---PVVAEDGGAISYKKKRIFLASM--DEEWILWNEI 93 (231)
T ss_dssp SCBCHHHHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHHTCCS---CEEEGGGTEEEETTEEEESCCC--SHHHHHHHHH
T ss_pred CcCCHHHHHHHHHHHHCCCEEEEEcCCChhHHHHHHHHcCCCC---eEEEeCCcEEEeCCEEEEeccH--HHHHHHHHHH
Confidence 3467788999999999999999999999999999998888632 122212110 0 00111 1111111111
Q ss_pred HHHhHHHHHhhhhhc-cccCCCCCCCeEEEEcCchhhhhhhHHHHHHHHHHHhcccee---EEEeCCc--ccHHHHHHHH
Q 001017 772 LKASVLHQLIRGKEL-LDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASV---ICCRSSP--KQKALVTRLV 845 (1189)
Q Consensus 772 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~~~~~~~~v---v~~r~sP--~qK~~iV~~l 845 (1189)
..+.+ +... ..... .... +.+-+... ..+.....+..+......+ .+....| ..|...++.+
T Consensus 94 -----~~~~~-~~~~~~~~~~-~~~~--~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~ei~~~~~~K~~~~~~~ 161 (231)
T 1wr8_A 94 -----RKRFP-NARTSYTMPD-RRAG--LVIMRETI---NVETVREIINELNLNLVAVDSGFAIHVKKPWINKGSGIEKA 161 (231)
T ss_dssp -----HHHCT-TCCBCTTGGG-CSSC--EEECTTTS---CHHHHHHHHHHTTCSCEEEECSSCEEEECTTCCHHHHHHHH
T ss_pred -----HHhCC-CceEEecCCC-ceee--EEEECCCC---CHHHHHHHHHhcCCcEEEEecCcEEEEecCCCChHHHHHHH
Confidence 10100 0000 00000 0011 12211000 1111222221211111211 1123333 3688888887
Q ss_pred HhcCC---CeEEEEcCCCCChhhhhhcCeeEEecCCcchhhhhccccccccc
Q 001017 846 KTKTS---STTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQF 894 (1189)
Q Consensus 846 ~~~~~---~~vl~iGDG~ND~~ml~~A~vGI~i~g~~~~~a~~~sD~~i~~f 894 (1189)
.+..| ..++++||+.||.+|++.|++|++|.+.. ...+..||+++.+.
T Consensus 162 ~~~~~~~~~~~~~iGD~~nD~~~~~~ag~~v~~~~~~-~~~~~~a~~v~~~~ 212 (231)
T 1wr8_A 162 SEFLGIKPKEVAHVGDGENDLDAFKVVGYKVAVAQAP-KILKENADYVTKKE 212 (231)
T ss_dssp HHHHTSCGGGEEEEECSGGGHHHHHHSSEEEECTTSC-HHHHTTCSEECSSC
T ss_pred HHHcCCCHHHEEEECCCHHHHHHHHHcCCeEEecCCC-HHHHhhCCEEecCC
Confidence 66433 67999999999999999999999996543 33667899988763
No 58
>1nrw_A Hypothetical protein, haloacid dehalogenase-like hydrolase; structural genomics, PSI, protein structure initiative; 1.70A {Bacillus subtilis} SCOP: c.108.1.10
Probab=97.97 E-value=6.4e-05 Score=83.50 Aligned_cols=57 Identities=23% Similarity=0.276 Sum_probs=46.8
Q ss_pred cHHHHHHHHHhcCC---CeEEEEcCCCCChhhhhhcCeeEEecCCcchhhhhccccccccc
Q 001017 837 QKALVTRLVKTKTS---STTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQF 894 (1189)
Q Consensus 837 qK~~iV~~l~~~~~---~~vl~iGDG~ND~~ml~~A~vGI~i~g~~~~~a~~~sD~~i~~f 894 (1189)
.|+..++.+.+..| ..++++||+.||++|++.|++||+|.+.. ...+..||+++.+.
T Consensus 216 ~K~~~~~~~~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~va~~~~~-~~~~~~a~~v~~~~ 275 (288)
T 1nrw_A 216 SKGQALKRLAKQLNIPLEETAAVGDSLNDKSMLEAAGKGVAMGNAR-EDIKSIADAVTLTN 275 (288)
T ss_dssp SHHHHHHHHHHHTTCCGGGEEEEESSGGGHHHHHHSSEEEECTTCC-HHHHHHCSEECCCG
T ss_pred ChHHHHHHHHHHhCCCHHHEEEEcCCHHHHHHHHHcCcEEEEcCCC-HHHHhhCceeecCC
Confidence 79988888877544 57999999999999999999999996443 34677899988653
No 59
>2p9j_A Hypothetical protein AQ2171; secsg, riken, PSI, structural GENO protein structure initiative, southeast collaboratory for S genomics; 2.40A {Aquifex aeolicus}
Probab=97.97 E-value=1e-05 Score=81.33 Aligned_cols=105 Identities=14% Similarity=0.084 Sum_probs=76.8
Q ss_pred CCCCcHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcccCCceEEEEeCCCCcccccchhhHHHHHHHHHHHhHHHHH
Q 001017 701 LQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQL 780 (1189)
Q Consensus 701 lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 780 (1189)
+.+++.++|+.|+++|+++.++||.....+..+.+.+|+..
T Consensus 37 ~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~--------------------------------------- 77 (162)
T 2p9j_A 37 FNVLDGIGIKLLQKMGITLAVISGRDSAPLITRLKELGVEE--------------------------------------- 77 (162)
T ss_dssp EEHHHHHHHHHHHTTTCEEEEEESCCCHHHHHHHHHTTCCE---------------------------------------
T ss_pred ecccHHHHHHHHHHCCCEEEEEeCCCcHHHHHHHHHcCCHh---------------------------------------
Confidence 45667899999999999999999999999999999998731
Q ss_pred hhhhhccccCCCCCCCeEEEEcCchhhhhhhHHHHHHHHHHHhccceeEEEeCCcccHHHHHHHH-Hhc--CCCeEEEEc
Q 001017 781 IRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLV-KTK--TSSTTLAIG 857 (1189)
Q Consensus 781 ~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~~~~~~~~vv~~r~sP~qK~~iV~~l-~~~--~~~~vl~iG 857 (1189)
.|.. +..|...++.+ ++. ..+.+++||
T Consensus 78 ------------------------------------------------~~~~--~kp~~~~~~~~~~~~~~~~~~~~~vG 107 (162)
T 2p9j_A 78 ------------------------------------------------IYTG--SYKKLEIYEKIKEKYSLKDEEIGFIG 107 (162)
T ss_dssp ------------------------------------------------EEEC--C--CHHHHHHHHHHTTCCGGGEEEEE
T ss_pred ------------------------------------------------hccC--CCCCHHHHHHHHHHcCCCHHHEEEEC
Confidence 1111 12233333322 221 346799999
Q ss_pred CCCCChhhhhhcCeeEEecCCcchhhhhccccccccch
Q 001017 858 DGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQFR 895 (1189)
Q Consensus 858 DG~ND~~ml~~A~vGI~i~g~~~~~a~~~sD~~i~~f~ 895 (1189)
|+.||+.|.+.|++++++.+. ....+..||+++.+..
T Consensus 108 D~~~Di~~a~~ag~~~~~~~~-~~~~~~~a~~v~~~~~ 144 (162)
T 2p9j_A 108 DDVVDIEVMKKVGFPVAVRNA-VEEVRKVAVYITQRNG 144 (162)
T ss_dssp CSGGGHHHHHHSSEEEECTTS-CHHHHHHCSEECSSCS
T ss_pred CCHHHHHHHHHCCCeEEecCc-cHHHHhhCCEEecCCC
Confidence 999999999999999988533 2335678999988744
No 60
>3mc1_A Predicted phosphatase, HAD family; PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.93A {Clostridium acetobutylicum} SCOP: c.108.1.0
Probab=97.96 E-value=1.1e-05 Score=85.70 Aligned_cols=121 Identities=17% Similarity=0.127 Sum_probs=86.2
Q ss_pred ccCCCCcHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcccCCceEEEEeCCCCcccccchhhHHHHHHHHHHHhHHH
Q 001017 699 DKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLH 778 (1189)
Q Consensus 699 D~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 778 (1189)
-++.+++.++++.|++.|+++.++|+.....+..+....|+...-.
T Consensus 85 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f~---------------------------------- 130 (226)
T 3mc1_A 85 NKVYDGIEALLSSLKDYGFHLVVATSKPTVFSKQILEHFKLAFYFD---------------------------------- 130 (226)
T ss_dssp CCBCTTHHHHHHHHHHHTCEEEEEEEEEHHHHHHHHHHTTCGGGCS----------------------------------
T ss_pred CccCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhCCHhhee----------------------------------
Confidence 3678999999999999999999999999888888888888743111
Q ss_pred HHhhhhhccccCCCCCCCeEEEEcCchhhhhhhHHHHHHHHHHHhccceeEEEeCCc--ccHHHHHHHHHhc---CCCeE
Q 001017 779 QLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSP--KQKALVTRLVKTK---TSSTT 853 (1189)
Q Consensus 779 ~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~~~~~~~~vv~~r~sP--~qK~~iV~~l~~~---~~~~v 853 (1189)
.++.+...+ ..|..+++.+.+. ....+
T Consensus 131 ------------------------------------------------~~~~~~~~~~~kp~~~~~~~~~~~lgi~~~~~ 162 (226)
T 3mc1_A 131 ------------------------------------------------AIVGSSLDGKLSTKEDVIRYAMESLNIKSDDA 162 (226)
T ss_dssp ------------------------------------------------EEEEECTTSSSCSHHHHHHHHHHHHTCCGGGE
T ss_pred ------------------------------------------------eeeccCCCCCCCCCHHHHHHHHHHhCcCcccE
Confidence 112222211 2345555544433 23689
Q ss_pred EEEcCCCCChhhhhhcCe---eEEecCCcchh-hhhccccccccchhhHHHH
Q 001017 854 LAIGDGANDVGMLQEADI---GVGISGVEGMQ-AVMSSDIAIAQFRFLERLL 901 (1189)
Q Consensus 854 l~iGDG~ND~~ml~~A~v---GI~i~g~~~~~-a~~~sD~~i~~f~~l~~ll 901 (1189)
++|||+.||+.|.+.|++ +|+++...... .+..+|+++.++.-|..++
T Consensus 163 i~iGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~v~~s~~el~~~~ 214 (226)
T 3mc1_A 163 IMIGDREYDVIGALKNNLPSIGVTYGFGSYEELKNAGANYIVNSVDELHKKI 214 (226)
T ss_dssp EEEESSHHHHHHHHTTTCCEEEESSSSSCHHHHHHHTCSEEESSHHHHHHHH
T ss_pred EEECCCHHHHHHHHHCCCCEEEEccCCCCHHHHHHcCCCEEECCHHHHHHHH
Confidence 999999999999999999 55543222221 2478999999988888774
No 61
>2rbk_A Putative uncharacterized protein; HAD-like phosphatase, unknown function; 1.00A {Bacteroides thetaiotaomicron} SCOP: c.108.1.10 PDB: 1ymq_A 2rb5_A 2rav_A 2rar_A
Probab=97.95 E-value=1.4e-05 Score=87.37 Aligned_cols=63 Identities=24% Similarity=0.357 Sum_probs=49.8
Q ss_pred cHHHHHHHHHhcCC---CeEEEEcCCCCChhhhhhcCeeEEecCCcchhhhhccccccccchh--hHHH
Q 001017 837 QKALVTRLVKTKTS---STTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQFRF--LERL 900 (1189)
Q Consensus 837 qK~~iV~~l~~~~~---~~vl~iGDG~ND~~ml~~A~vGI~i~g~~~~~a~~~sD~~i~~f~~--l~~l 900 (1189)
.|...++.+.+..| ..+++|||+.||++|++.|++|++|.+.. ...+..||+++.+..- +..+
T Consensus 187 ~K~~~~~~~~~~~~~~~~~~~~iGD~~nD~~~~~~ag~~v~~~n~~-~~~~~~a~~v~~~~~~dGv~~~ 254 (261)
T 2rbk_A 187 TKQKGIDEIIRHFGIKLEETMSFGDGGNDISMLRHAAIGVAMGQAK-EDVKAAADYVTAPIDEDGISKA 254 (261)
T ss_dssp SHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSC-HHHHHHSSEECCCGGGTHHHHH
T ss_pred ChHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCceEEecCcc-HHHHhhCCEEeccCchhhHHHH
Confidence 78888887776533 68999999999999999999999995433 3467889999877655 5554
No 62
>4gxt_A A conserved functionally unknown protein; structural genomics, PSI-biology; 1.82A {Anaerococcus prevotii}
Probab=97.89 E-value=1.4e-05 Score=91.93 Aligned_cols=40 Identities=8% Similarity=0.193 Sum_probs=38.4
Q ss_pred cCCCCcHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCc
Q 001017 700 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSL 739 (1189)
Q Consensus 700 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi 739 (1189)
++.|++.+.|+.|+++|++|+|+||.....+..+|.++|+
T Consensus 221 r~~p~~~eLi~~L~~~G~~v~IVSgg~~~~v~~ia~~lg~ 260 (385)
T 4gxt_A 221 RTLDEMVDLYRSLEENGIDCYIVSASFIDIVRAFATDTNN 260 (385)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHCTTS
T ss_pred eeCHHHHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHhCc
Confidence 4789999999999999999999999999999999999986
No 63
>1s2o_A SPP, sucrose-phosphatase; phosphohydrolase, HAD superfamily, cyanobacteria; 1.40A {Synechocystis SP} SCOP: c.108.1.10 PDB: 1tj3_A 1tj4_A* 1tj5_A* 1u2s_A* 1u2t_A* 2b1q_A* 2b1r_A* 2d2v_A*
Probab=97.88 E-value=4.1e-05 Score=82.83 Aligned_cols=62 Identities=21% Similarity=0.298 Sum_probs=47.7
Q ss_pred eCCcc--cHHHHHHHHHhcCC---CeEEEEcCCCCChhhhhhcCeeEEecCCcchhhhhc-------cccccccc
Q 001017 832 RSSPK--QKALVTRLVKTKTS---STTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMS-------SDIAIAQF 894 (1189)
Q Consensus 832 r~sP~--qK~~iV~~l~~~~~---~~vl~iGDG~ND~~ml~~A~vGI~i~g~~~~~a~~~-------sD~~i~~f 894 (1189)
.+.|. .|+..++.+.+..| ..++++||+.||.+|++.|++||+|++. ....+.. ||++..+.
T Consensus 155 ei~~~~~~K~~~l~~l~~~~~~~~~~~~~~GD~~nD~~m~~~~g~~va~~na-~~~~k~~a~~~~~~a~~v~~~~ 228 (244)
T 1s2o_A 155 DLLPQRSNKGNATQYLQQHLAMEPSQTLVCGDSGNDIGLFETSARGVIVRNA-QPELLHWYDQWGDSRHYRAQSS 228 (244)
T ss_dssp EEEETTCSHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHTSSSEEEECTTC-CHHHHHHHHHHCCTTEEECSSC
T ss_pred EeccCCCChHHHHHHHHHHhCCCHHHEEEECCchhhHHHHhccCcEEEEcCC-cHHHHHHHhcccccceeecCCc
Confidence 34454 79999998887544 5799999999999999999999999543 3335554 78887653
No 64
>1xvi_A MPGP, YEDP, putative mannosyl-3-phosphoglycerate phosphatase; hypothetical protein, conserved protein, phophatase-like domain; HET: 1PE PG4 PGE; 2.26A {Escherichia coli K12} SCOP: c.108.1.10
Probab=97.83 E-value=0.00015 Score=79.79 Aligned_cols=40 Identities=8% Similarity=0.078 Sum_probs=36.5
Q ss_pred cCCCCcHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCc
Q 001017 700 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSL 739 (1189)
Q Consensus 700 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi 739 (1189)
.+-+.+.++|++|+++|++++++||+....+..+..++++
T Consensus 26 ~~~~~~~~~l~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~ 65 (275)
T 1xvi_A 26 YDWQPAAPWLTRLREANVPVILCSSKTSAEMLYLQKTLGL 65 (275)
T ss_dssp CSCCTTHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHTTC
T ss_pred cCCHHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCC
Confidence 4557789999999999999999999999999999999876
No 65
>3d6j_A Putative haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343}
Probab=97.79 E-value=2.7e-05 Score=82.25 Aligned_cols=41 Identities=10% Similarity=0.015 Sum_probs=35.8
Q ss_pred cCCCCcHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcc
Q 001017 700 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLL 740 (1189)
Q Consensus 700 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~ 740 (1189)
.+.+++.++++.|++.|++++++|+.....+.......|+.
T Consensus 89 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~~~~~~~~ 129 (225)
T 3d6j_A 89 ILFPDTLPTLTHLKKQGIRIGIISTKYRFRILSFLRNHMPD 129 (225)
T ss_dssp EECTTHHHHHHHHHHHTCEEEEECSSCHHHHHHHHHTSSCT
T ss_pred ccCcCHHHHHHHHHHCCCeEEEEECCCHHHHHHHHHHcCch
Confidence 34699999999999999999999999988888887777764
No 66
>2pib_A Phosphorylated carbohydrates phosphatase TM_1254; 3D-structure, structural genomics, NPPSFA; HET: MSE GOL; 1.73A {Thermotoga maritima MSB8} PDB: 3kbb_A*
Probab=97.79 E-value=2.2e-05 Score=82.23 Aligned_cols=126 Identities=17% Similarity=0.138 Sum_probs=82.2
Q ss_pred ccCCCCcHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcccCCceEEEEeCCCCcccccchhhHHHHHHHHHHHhHHH
Q 001017 699 DKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLH 778 (1189)
Q Consensus 699 D~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 778 (1189)
-++.+++.++++.|++.|+++.++|+.....+..+...+|+...-..
T Consensus 83 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~~~~f~~--------------------------------- 129 (216)
T 2pib_A 83 LKENPGVREALEFVKSKRIKLALATSTPQREALERLRRLDLEKYFDV--------------------------------- 129 (216)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGCSE---------------------------------
T ss_pred CCcCcCHHHHHHHHHHCCCCEEEEeCCcHHhHHHHHHhcChHHhcCE---------------------------------
Confidence 35789999999999999999999999999999999998887432111
Q ss_pred HHhhhhhccccCCCCCCCeEEEEcCchhhhhhhHHHHHHHHHHHhccceeEEEeCCcccHHHHHHHHHhcCCCeEEEEcC
Q 001017 779 QLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGD 858 (1189)
Q Consensus 779 ~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~~~~~~~~vv~~r~sP~qK~~iV~~l~~~~~~~vl~iGD 858 (1189)
++.+.... ...-.|.--..+.+.+.- ..+.+++|||
T Consensus 130 ---------------------~~~~~~~~----------------------~~kp~~~~~~~~~~~~~~-~~~~~i~iGD 165 (216)
T 2pib_A 130 ---------------------MVFGDQVK----------------------NGKPDPEIYLLVLERLNV-VPEKVVVFED 165 (216)
T ss_dssp ---------------------EECGGGSS----------------------SCTTSTHHHHHHHHHHTC-CGGGEEEEEC
T ss_pred ---------------------EeecccCC----------------------CCCcCcHHHHHHHHHcCC-CCceEEEEeC
Confidence 11111000 000011111223333322 4477999999
Q ss_pred CCCChhhhhhcCeeEE---ec-CCcchhhhhccccccccchhhHHHH
Q 001017 859 GANDVGMLQEADIGVG---IS-GVEGMQAVMSSDIAIAQFRFLERLL 901 (1189)
Q Consensus 859 G~ND~~ml~~A~vGI~---i~-g~~~~~a~~~sD~~i~~f~~l~~ll 901 (1189)
+.||+.|.+.|++... +. +....+....+|+++.++.-+..+|
T Consensus 166 ~~~Di~~a~~aG~~~i~~~v~~~~~~~~~~~~a~~~~~~~~el~~~l 212 (216)
T 2pib_A 166 SKSGVEAAKSAGIERIYGVVHSLNDGKALLEAGAVALVKPEEILNVL 212 (216)
T ss_dssp SHHHHHHHHHTTCCEEEEECCSSSCCHHHHHTTCSEEECGGGHHHHH
T ss_pred cHHHHHHHHHcCCcEEehccCCCCCchhhcchhheeeCCHHHHHHHH
Confidence 9999999999999332 32 2222223358999999988877663
No 67
>2hsz_A Novel predicted phosphatase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: UNL; 1.90A {Haemophilus somnus 129PT} SCOP: c.108.1.6
Probab=97.73 E-value=2.8e-05 Score=83.99 Aligned_cols=42 Identities=24% Similarity=0.218 Sum_probs=38.5
Q ss_pred ccCCCCcHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcc
Q 001017 699 DKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLL 740 (1189)
Q Consensus 699 D~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~ 740 (1189)
-++.+++.++++.|++.|++++++|+.....+..+...+|+.
T Consensus 113 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~gl~ 154 (243)
T 2hsz_A 113 SRLYPNVKETLEALKAQGYILAVVTNKPTKHVQPILTAFGID 154 (243)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCG
T ss_pred CccCCCHHHHHHHHHHCCCEEEEEECCcHHHHHHHHHHcCch
Confidence 467899999999999999999999999999999999999874
No 68
>3sd7_A Putative phosphatase; structural genomics, haloacid dehalogenase-like hydrolase, H center for structural genomics of infectious diseases; HET: PGE; 1.70A {Clostridium difficile}
Probab=97.72 E-value=2.2e-05 Score=84.39 Aligned_cols=121 Identities=17% Similarity=0.165 Sum_probs=84.4
Q ss_pred ccCCCCcHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcccCCceEEEEeCCCCcccccchhhHHHHHHHHHHHhHHH
Q 001017 699 DKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLH 778 (1189)
Q Consensus 699 D~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 778 (1189)
-++.+++.++++.|++.|++++++|+.....+..+...+|+...-..
T Consensus 109 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~--------------------------------- 155 (240)
T 3sd7_A 109 NKIYENMKEILEMLYKNGKILLVATSKPTVFAETILRYFDIDRYFKY--------------------------------- 155 (240)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCGGGCSE---------------------------------
T ss_pred cccCccHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHcCcHhhEEE---------------------------------
Confidence 45789999999999999999999999998888888888887432111
Q ss_pred HHhhhhhccccCCCCCCCeEEEEcCchhhhhhhHHHHHHHHHHHhccceeEEEeCCc--ccHHHHHHHHHhc---C-CCe
Q 001017 779 QLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSP--KQKALVTRLVKTK---T-SST 852 (1189)
Q Consensus 779 ~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~~~~~~~~vv~~r~sP--~qK~~iV~~l~~~---~-~~~ 852 (1189)
++++...+ .-|..+++.+.+. . ...
T Consensus 156 -------------------------------------------------~~~~~~~~~~kp~~~~~~~~~~~~g~~~~~~ 186 (240)
T 3sd7_A 156 -------------------------------------------------IAGSNLDGTRVNKNEVIQYVLDLCNVKDKDK 186 (240)
T ss_dssp -------------------------------------------------EEEECTTSCCCCHHHHHHHHHHHHTCCCGGG
T ss_pred -------------------------------------------------EEeccccCCCCCCHHHHHHHHHHcCCCCCCc
Confidence 12222111 2344444443332 3 568
Q ss_pred EEEEcCCCCChhhhhhcCee-EEec-CCcchh--hhhccccccccchhhHHHH
Q 001017 853 TLAIGDGANDVGMLQEADIG-VGIS-GVEGMQ--AVMSSDIAIAQFRFLERLL 901 (1189)
Q Consensus 853 vl~iGDG~ND~~ml~~A~vG-I~i~-g~~~~~--a~~~sD~~i~~f~~l~~ll 901 (1189)
+++|||+.||+.|.+.|++. |++. |..... .+..+|+++.++.-+..+|
T Consensus 187 ~i~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~v~~~~~el~~~l 239 (240)
T 3sd7_A 187 VIMVGDRKYDIIGAKKIGIDSIGVLYGYGSFEEISESEPTYIVENVESIKDIL 239 (240)
T ss_dssp EEEEESSHHHHHHHHHHTCEEEEESSSSCCHHHHHHHCCSEEESSSTTHHHHH
T ss_pred EEEECCCHHHHHHHHHCCCCEEEEeCCCCCHHHHhhcCCCEEECCHHHHHHHh
Confidence 99999999999999999993 2332 222211 2467999999988877764
No 69
>3s6j_A Hydrolase, haloacid dehalogenase-like family; structural genomics, PSI-2; 2.20A {Pseudomonas syringae PV}
Probab=97.71 E-value=1.9e-05 Score=84.23 Aligned_cols=122 Identities=18% Similarity=0.105 Sum_probs=81.6
Q ss_pred ccCCCCcHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcccCCceEEEEeCCCCcccccchhhHHHHHHHHHHHhHHH
Q 001017 699 DKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLH 778 (1189)
Q Consensus 699 D~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 778 (1189)
-++.+++.++++.|++.|+++.++|+.....+..+....|+...-..
T Consensus 90 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~--------------------------------- 136 (233)
T 3s6j_A 90 IIALPGAVELLETLDKENLKWCIATSGGIDTATINLKALKLDINKIN--------------------------------- 136 (233)
T ss_dssp CEECTTHHHHHHHHHHTTCCEEEECSSCHHHHHHHHHTTTCCTTSSC---------------------------------
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEeCCchhhHHHHHHhcchhhhhhe---------------------------------
Confidence 35679999999999999999999999999888888888887431100
Q ss_pred HHhhhhhccccCCCCCCCeEEEEcCchhhhhhhHHHHHHHHHHHhccceeEEEeCCcccHHHHHHHHHhc---CCCeEEE
Q 001017 779 QLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTK---TSSTTLA 855 (1189)
Q Consensus 779 ~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~~~~~~~~vv~~r~sP~qK~~iV~~l~~~---~~~~vl~ 855 (1189)
++.+.... ...-|..+++.+.+. ....+++
T Consensus 137 ---------------------~~~~~~~~--------------------------~~kp~~~~~~~~~~~l~~~~~~~i~ 169 (233)
T 3s6j_A 137 ---------------------IVTRDDVS--------------------------YGKPDPDLFLAAAKKIGAPIDECLV 169 (233)
T ss_dssp ---------------------EECGGGSS--------------------------CCTTSTHHHHHHHHHTTCCGGGEEE
T ss_pred ---------------------eeccccCC--------------------------CCCCChHHHHHHHHHhCCCHHHEEE
Confidence 11111000 011123333333332 3367999
Q ss_pred EcCCCCChhhhhhcCe-eEEe--cCCcchhhhhc-cccccccchhhHHH
Q 001017 856 IGDGANDVGMLQEADI-GVGI--SGVEGMQAVMS-SDIAIAQFRFLERL 900 (1189)
Q Consensus 856 iGDG~ND~~ml~~A~v-GI~i--~g~~~~~a~~~-sD~~i~~f~~l~~l 900 (1189)
|||+.||+.|.+.|++ +|++ +.......+.. +|+++.++.-+..+
T Consensus 170 iGD~~~Di~~a~~aG~~~i~v~~g~~~~~~l~~~~ad~v~~~~~el~~~ 218 (233)
T 3s6j_A 170 IGDAIWDMLAARRCKATGVGLLSGGYDIGELERAGALRVYEDPLDLLNH 218 (233)
T ss_dssp EESSHHHHHHHHHTTCEEEEEGGGSCCHHHHHHTTCSEEESSHHHHHHT
T ss_pred EeCCHHhHHHHHHCCCEEEEEeCCCCchHhHHhcCCCEEECCHHHHHHH
Confidence 9999999999999999 3444 22322223333 89999998887776
No 70
>2go7_A Hydrolase, haloacid dehalogenase-like family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.10A {Streptococcus pneumoniae} SCOP: c.108.1.6
Probab=97.69 E-value=2.6e-05 Score=81.02 Aligned_cols=118 Identities=19% Similarity=0.183 Sum_probs=76.5
Q ss_pred cCCCCcHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcccCCceEEEEeCCCCcccccchhhHHHHHHHHHHHhHHHH
Q 001017 700 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQ 779 (1189)
Q Consensus 700 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 779 (1189)
.+.+++.++++.|++.|++++++|+....... .....|+...- .
T Consensus 85 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~-~~~~~~~~~~f-~---------------------------------- 128 (207)
T 2go7_A 85 VLMPGAREVLAWADESGIQQFIYTHKGNNAFT-ILKDLGVESYF-T---------------------------------- 128 (207)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCTHHHH-HHHHHTCGGGE-E----------------------------------
T ss_pred eeCcCHHHHHHHHHHCCCeEEEEeCCchHHHH-HHHHcCchhhe-e----------------------------------
Confidence 46899999999999999999999999887776 66666653210 0
Q ss_pred HhhhhhccccCCCCCCCeEEEEcCchhhhhhhHHHHHHHHHHHhccceeEEEeCCcccHHHHHHHHHhcCCCeEEEEcCC
Q 001017 780 LIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDG 859 (1189)
Q Consensus 780 ~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~~~~~~~~vv~~r~sP~qK~~iV~~l~~~~~~~vl~iGDG 859 (1189)
.++.+.... ...-.|+--..+.+.+.- ....+++|||+
T Consensus 129 -------------------~~~~~~~~~----------------------~~Kp~~~~~~~~~~~~~i-~~~~~~~iGD~ 166 (207)
T 2go7_A 129 -------------------EILTSQSGF----------------------VRKPSPEAATYLLDKYQL-NSDNTYYIGDR 166 (207)
T ss_dssp -------------------EEECGGGCC----------------------CCTTSSHHHHHHHHHHTC-CGGGEEEEESS
T ss_pred -------------------eEEecCcCC----------------------CCCCCcHHHHHHHHHhCC-CcccEEEECCC
Confidence 011110000 000011111233333332 34689999999
Q ss_pred CCChhhhhhcCee-EEecCCcchhhhhccccccccchhhHHH
Q 001017 860 ANDVGMLQEADIG-VGISGVEGMQAVMSSDIAIAQFRFLERL 900 (1189)
Q Consensus 860 ~ND~~ml~~A~vG-I~i~g~~~~~a~~~sD~~i~~f~~l~~l 900 (1189)
.||++|++.|+++ |++.... . .+|+++.++.-+..+
T Consensus 167 ~nDi~~~~~aG~~~i~~~~~~-~----~a~~v~~~~~el~~~ 203 (207)
T 2go7_A 167 TLDVEFAQNSGIQSINFLEST-Y----EGNHRIQALADISRI 203 (207)
T ss_dssp HHHHHHHHHHTCEEEESSCCS-C----TTEEECSSTTHHHHH
T ss_pred HHHHHHHHHCCCeEEEEecCC-C----CCCEEeCCHHHHHHH
Confidence 9999999999998 6775332 2 689998887766554
No 71
>3nas_A Beta-PGM, beta-phosphoglucomutase; PSI, structural genomics, protein structure initiative, NEW research center for structural genomics; 3.00A {Bacillus subtilis}
Probab=97.69 E-value=6.6e-05 Score=80.04 Aligned_cols=118 Identities=16% Similarity=0.178 Sum_probs=73.5
Q ss_pred cCCCCcHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcccCCceEEEEeCCCCcccccchhhHHHHHHHHHHHhHHHH
Q 001017 700 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQ 779 (1189)
Q Consensus 700 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 779 (1189)
++.+++.++++.|++.|+++.++|+... +..+...+|+...-..
T Consensus 92 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~--~~~~l~~~gl~~~f~~---------------------------------- 135 (233)
T 3nas_A 92 DLLPGIGRLLCQLKNENIKIGLASSSRN--APKILRRLAIIDDFHA---------------------------------- 135 (233)
T ss_dssp GSCTTHHHHHHHHHHTTCEEEECCSCTT--HHHHHHHTTCTTTCSE----------------------------------
T ss_pred CcCcCHHHHHHHHHHCCCcEEEEcCchh--HHHHHHHcCcHhhcCE----------------------------------
Confidence 4789999999999999999999999754 6667777776321100
Q ss_pred HhhhhhccccCCCCCCCeEEEEcCchhhhhhhHHHHHHHHHHHhccceeEEEeCCcccHHHHHHHHHhcCCCeEEEEcCC
Q 001017 780 LIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDG 859 (1189)
Q Consensus 780 ~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~~~~~~~~vv~~r~sP~qK~~iV~~l~~~~~~~vl~iGDG 859 (1189)
++.++.. -...-.|.-=..+.+.+.- ....+++|||+
T Consensus 136 --------------------i~~~~~~----------------------~~~Kp~~~~~~~~~~~lgi-~~~~~i~vGDs 172 (233)
T 3nas_A 136 --------------------IVDPTTL----------------------AKGKPDPDIFLTAAAMLDV-SPADCAAIEDA 172 (233)
T ss_dssp --------------------ECCC-------------------------------CCHHHHHHHHHTS-CGGGEEEEECS
T ss_pred --------------------EeeHhhC----------------------CCCCCChHHHHHHHHHcCC-CHHHEEEEeCC
Confidence 1111100 0001111111233333322 44789999999
Q ss_pred CCChhhhhhcCeeEEecCCcchhhhhccccccccchhhH
Q 001017 860 ANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQFRFLE 898 (1189)
Q Consensus 860 ~ND~~ml~~A~vGI~i~g~~~~~a~~~sD~~i~~f~~l~ 898 (1189)
.||+.|.+.|++++++.+.... .+ .||+++.++.-+.
T Consensus 173 ~~Di~~a~~aG~~~~~~~~~~~-~~-~ad~v~~s~~el~ 209 (233)
T 3nas_A 173 EAGISAIKSAGMFAVGVGQGQP-ML-GADLVVRQTSDLT 209 (233)
T ss_dssp HHHHHHHHHTTCEEEECC---------CSEECSSGGGCC
T ss_pred HHHHHHHHHcCCEEEEECCccc-cc-cCCEEeCChHhCC
Confidence 9999999999999988654432 33 8999998866643
No 72
>3e58_A Putative beta-phosphoglucomutase; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.86A {Streptococcus thermophilus lmg 18311}
Probab=97.68 E-value=3.8e-05 Score=80.33 Aligned_cols=123 Identities=10% Similarity=0.045 Sum_probs=81.4
Q ss_pred cCCCCcHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcccCCceEEEEeCCCCcccccchhhHHHHHHHHHHHhHHHH
Q 001017 700 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQ 779 (1189)
Q Consensus 700 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 779 (1189)
++.+++.++++.|++.|++++++|+.....+..+.+..|+...-..
T Consensus 89 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~---------------------------------- 134 (214)
T 3e58_A 89 LIFPDVLKVLNEVKSQGLEIGLASSSVKADIFRALEENRLQGFFDI---------------------------------- 134 (214)
T ss_dssp HBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSE----------------------------------
T ss_pred CcCchHHHHHHHHHHCCCCEEEEeCCcHHHHHHHHHHcCcHhheee----------------------------------
Confidence 5789999999999999999999999999999999888887432111
Q ss_pred HhhhhhccccCCCCCCCeEEEEcCchhhhhhhHHHHHHHHHHHhccceeEEEeCCcccHHHHHHHHHhcCCCeEEEEcCC
Q 001017 780 LIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDG 859 (1189)
Q Consensus 780 ~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~~~~~~~~vv~~r~sP~qK~~iV~~l~~~~~~~vl~iGDG 859 (1189)
++.+.... ...-.|.--..+.+.+.- ....+++|||+
T Consensus 135 --------------------~~~~~~~~----------------------~~kp~~~~~~~~~~~~~~-~~~~~~~iGD~ 171 (214)
T 3e58_A 135 --------------------VLSGEEFK----------------------ESKPNPEIYLTALKQLNV-QASRALIIEDS 171 (214)
T ss_dssp --------------------EEEGGGCS----------------------SCTTSSHHHHHHHHHHTC-CGGGEEEEECS
T ss_pred --------------------Eeeccccc----------------------CCCCChHHHHHHHHHcCC-ChHHeEEEecc
Confidence 11110000 000011111223333322 34789999999
Q ss_pred CCChhhhhhcCeeEEecCCc-chhhhhccccccccchhhHH
Q 001017 860 ANDVGMLQEADIGVGISGVE-GMQAVMSSDIAIAQFRFLER 899 (1189)
Q Consensus 860 ~ND~~ml~~A~vGI~i~g~~-~~~a~~~sD~~i~~f~~l~~ 899 (1189)
.||+.|.+.|++++.+.+.. .......+|+++.++.-+..
T Consensus 172 ~~Di~~a~~aG~~~~~~~~~~~~~~~~~a~~~~~~~~el~~ 212 (214)
T 3e58_A 172 EKGIAAGVAADVEVWAIRDNEFGMDQSAAKGLLDSLTDVLD 212 (214)
T ss_dssp HHHHHHHHHTTCEEEEECCSSSCCCCTTSSEEESSGGGGGG
T ss_pred HhhHHHHHHCCCEEEEECCCCccchhccHHHHHHHHHHHHh
Confidence 99999999999988664332 11134678999988766544
No 73
>3ddh_A Putative haloacid dehalogenase-like family hydrol; hydrolase, HAD superfamily, ST genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides thetaiotaomicron}
Probab=97.68 E-value=9.5e-05 Score=78.45 Aligned_cols=116 Identities=18% Similarity=0.024 Sum_probs=80.5
Q ss_pred cCCCCcHHHHHHHHHcC-CeEEEEcCCChhhHHHHHHHcCcccCCceEEEEeCCCCcccccchhhHHHHHHHHHHHhHHH
Q 001017 700 KLQNGVPECIDKLAQAG-IKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLH 778 (1189)
Q Consensus 700 ~lr~~v~~~I~~L~~aG-Ikv~mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 778 (1189)
++.+++.++++.|++.| +++.++|+.....+..+...+|+...-.
T Consensus 105 ~~~~~~~~~l~~l~~~g~~~~~i~t~~~~~~~~~~l~~~~~~~~f~---------------------------------- 150 (234)
T 3ddh_A 105 ELLPGVKETLKTLKETGKYKLVVATKGDLLDQENKLERSGLSPYFD---------------------------------- 150 (234)
T ss_dssp CBCTTHHHHHHHHHHHCCCEEEEEEESCHHHHHHHHHHHTCGGGCS----------------------------------
T ss_pred CcCccHHHHHHHHHhCCCeEEEEEeCCchHHHHHHHHHhCcHhhhh----------------------------------
Confidence 57899999999999999 9999999988888777777777632110
Q ss_pred HHhhhhhccccCCCCCCCeEEEEcCchhhhhhhHHHHHHHHHHHhccceeEEEeCCcccHHHHHHHHHhc---CCCeEEE
Q 001017 779 QLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTK---TSSTTLA 855 (1189)
Q Consensus 779 ~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~~~~~~~~vv~~r~sP~qK~~iV~~l~~~---~~~~vl~ 855 (1189)
.+++...| |..+++.+.+. ..+.+++
T Consensus 151 -------------------------------------------------~~~~~~kp--k~~~~~~~~~~lgi~~~~~i~ 179 (234)
T 3ddh_A 151 -------------------------------------------------HIEVMSDK--TEKEYLRLLSILQIAPSELLM 179 (234)
T ss_dssp -------------------------------------------------EEEEESCC--SHHHHHHHHHHHTCCGGGEEE
T ss_pred -------------------------------------------------eeeecCCC--CHHHHHHHHHHhCCCcceEEE
Confidence 12232233 45555544443 3378999
Q ss_pred EcCCC-CChhhhhhcCeeEEec------CCcchhhh-hccccccccchhhHHH
Q 001017 856 IGDGA-NDVGMLQEADIGVGIS------GVEGMQAV-MSSDIAIAQFRFLERL 900 (1189)
Q Consensus 856 iGDG~-ND~~ml~~A~vGI~i~------g~~~~~a~-~~sD~~i~~f~~l~~l 900 (1189)
|||+. ||+.|.+.|++++.+- |....... ..+|+++.++.-|..+
T Consensus 180 iGD~~~~Di~~a~~aG~~~v~v~~~~~~g~~~~~~~~~~~d~v~~~l~el~~~ 232 (234)
T 3ddh_A 180 VGNSFKSDIQPVLSLGGYGVHIPFEVMWKHEVTETFAHERLKQVKRLDDLLSL 232 (234)
T ss_dssp EESCCCCCCHHHHHHTCEEEECCCCTTCCCC---CCCCTTEEECSSGGGHHHH
T ss_pred ECCCcHHHhHHHHHCCCeEEEecCCcccccCCcccccCCCceecccHHHHHHh
Confidence 99996 9999999999988663 12211112 3349999887776654
No 74
>2nyv_A Pgpase, PGP, phosphoglycolate phosphatase; structural genomics, PSI-2, protein structure initiative; 2.10A {Aquifex aeolicus} PDB: 2yy6_A
Probab=97.65 E-value=4.3e-05 Score=81.17 Aligned_cols=125 Identities=18% Similarity=0.146 Sum_probs=82.8
Q ss_pred ccCCCCcHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcccCCceEEEEeCCCCcccccchhhHHHHHHHHHHHhHHH
Q 001017 699 DKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLH 778 (1189)
Q Consensus 699 D~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 778 (1189)
-++.+++.++++.|++.|+++.++|+.....+..+...+|+...-..
T Consensus 82 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~~f~~--------------------------------- 128 (222)
T 2nyv_A 82 TKPYPEIPYTLEALKSKGFKLAVVSNKLEELSKKILDILNLSGYFDL--------------------------------- 128 (222)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGCSE---------------------------------
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCHHHheE---------------------------------
Confidence 46789999999999999999999999998888888888887431111
Q ss_pred HHhhhhhccccCCCCCCCeEEEEcCchhhhhhhHHHHHHHHHHHhccceeEEEeCCcccHHHHHHHHHhcCCCeEEEEcC
Q 001017 779 QLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGD 858 (1189)
Q Consensus 779 ~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~~~~~~~~vv~~r~sP~qK~~iV~~l~~~~~~~vl~iGD 858 (1189)
++.+... ....-.|.--..+.+.+.- ....+++|||
T Consensus 129 ---------------------i~~~~~~----------------------~~~Kp~~~~~~~~~~~~~~-~~~~~~~vGD 164 (222)
T 2nyv_A 129 ---------------------IVGGDTF----------------------GEKKPSPTPVLKTLEILGE-EPEKALIVGD 164 (222)
T ss_dssp ---------------------EECTTSS----------------------CTTCCTTHHHHHHHHHHTC-CGGGEEEEES
T ss_pred ---------------------EEecCcC----------------------CCCCCChHHHHHHHHHhCC-CchhEEEECC
Confidence 1111100 0000112222233333322 3468999999
Q ss_pred CCCChhhhhhcCee-EEecC-CcchhhhhccccccccchhhHHHH
Q 001017 859 GANDVGMLQEADIG-VGISG-VEGMQAVMSSDIAIAQFRFLERLL 901 (1189)
Q Consensus 859 G~ND~~ml~~A~vG-I~i~g-~~~~~a~~~sD~~i~~f~~l~~ll 901 (1189)
+.||+.|.+.|+++ |++.. ...... ..+|+++.++.-+..++
T Consensus 165 ~~~Di~~a~~aG~~~i~v~~g~~~~~~-~~~~~~~~~~~el~~~l 208 (222)
T 2nyv_A 165 TDADIEAGKRAGTKTALALWGYVKLNS-QIPDFTLSRPSDLVKLM 208 (222)
T ss_dssp SHHHHHHHHHHTCEEEEETTSSCSCCC-CCCSEEESSTTHHHHHH
T ss_pred CHHHHHHHHHCCCeEEEEcCCCCCccc-cCCCEEECCHHHHHHHH
Confidence 99999999999998 67642 221112 56899988887777663
No 75
>2fue_A PMM 1, PMMH-22, phosphomannomutase 1; enzyme-product complex, protein glycosyl carbohydrate-deficient glycoprotein syndrome; HET: MSE M1P; 1.75A {Homo sapiens} SCOP: c.108.1.10 PDB: 2fuc_A*
Probab=97.62 E-value=0.00011 Score=80.22 Aligned_cols=56 Identities=14% Similarity=0.227 Sum_probs=45.0
Q ss_pred cHHHHHHHHHhcCCCeEEEEcC----CCCChhhhhhcC-eeEEecCCcchhhhhcccccccc
Q 001017 837 QKALVTRLVKTKTSSTTLAIGD----GANDVGMLQEAD-IGVGISGVEGMQAVMSSDIAIAQ 893 (1189)
Q Consensus 837 qK~~iV~~l~~~~~~~vl~iGD----G~ND~~ml~~A~-vGI~i~g~~~~~a~~~sD~~i~~ 893 (1189)
.|+..++.+.......|+++|| |.||.+||+.|+ +|++| ++.....+..||++...
T Consensus 197 sKg~al~~l~gi~~~~viafGDs~~~~~NDi~Ml~~~~~~g~av-~NA~~~~k~~a~~v~~~ 257 (262)
T 2fue_A 197 DKRYCLDSLDQDSFDTIHFFGNETSPGGNDFEIFADPRTVGHSV-VSPQDTVQRCREIFFPE 257 (262)
T ss_dssp STTHHHHHHTTSCCSEEEEEESCCSTTSTTHHHHHSTTSEEEEC-SSHHHHHHHHHHHHCTT
T ss_pred CHHHHHHHHHCCCHHHEEEECCCCCCCCCCHHHHhcCccCcEEe-cCCCHHHHHhhheeCCC
Confidence 6999999982213478999999 999999999999 69999 45455578889988654
No 76
>3f9r_A Phosphomannomutase; trypanosome glycobiology structural genomics, isomerase, structural genomics consortium, SGC; 1.85A {Trypanosoma brucei} SCOP: c.108.1.0 PDB: 2i54_A* 2i55_A*
Probab=97.62 E-value=3.3e-05 Score=83.56 Aligned_cols=42 Identities=21% Similarity=0.375 Sum_probs=37.2
Q ss_pred cHHHHHHHHHhcCCCeEEEEcC----CCCChhhhhhcC-eeEEecCCc
Q 001017 837 QKALVTRLVKTKTSSTTLAIGD----GANDVGMLQEAD-IGVGISGVE 879 (1189)
Q Consensus 837 qK~~iV~~l~~~~~~~vl~iGD----G~ND~~ml~~A~-vGI~i~g~~ 879 (1189)
.|+..++.|.+ ....|+++|| |.||.+||+.|+ +|++|++.+
T Consensus 187 ~Kg~al~~L~~-~~~ev~afGD~~~~g~NDi~Ml~~a~~~g~~v~n~~ 233 (246)
T 3f9r_A 187 DKTYCLQFVED-DFEEIHFFGDKTQEGGNDYEIYTDKRTIGHKVTSYK 233 (246)
T ss_dssp SGGGGGGGTTT-TCSEEEEEESCCSTTSTTHHHHTCTTSEEEECSSHH
T ss_pred CHHHHHHHHHc-CcccEEEEeCCCCCCCCCHHHHhCCCccEEEeCCHH
Confidence 79999999988 7789999999 799999999996 899996543
No 77
>3umb_A Dehalogenase-like hydrolase; 2.20A {Ralstonia solanacearum}
Probab=97.59 E-value=5.4e-05 Score=80.68 Aligned_cols=124 Identities=10% Similarity=-0.034 Sum_probs=83.8
Q ss_pred ccCCCCcHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcccCCceEEEEeCCCCcccccchhhHHHHHHHHHHHhHHH
Q 001017 699 DKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLH 778 (1189)
Q Consensus 699 D~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 778 (1189)
-++.+++.++++.|++.|+++.++|+.....+..+...+|+...-..
T Consensus 98 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f~~--------------------------------- 144 (233)
T 3umb_A 98 LSAFPENVPVLRQLREMGLPLGILSNGNPQMLEIAVKSAGMSGLFDH--------------------------------- 144 (233)
T ss_dssp CEECTTHHHHHHHHHTTTCCEEEEESSCHHHHHHHHHTTTCTTTCSE---------------------------------
T ss_pred CCCCCCHHHHHHHHHhCCCcEEEEeCCCHHHHHHHHHHCCcHhhcCE---------------------------------
Confidence 45789999999999999999999999999888888888887432111
Q ss_pred HHhhhhhccccCCCCCCCeEEEEcCchhhhhhhHHHHHHHHHHHhccceeEEEeCCcc--cHHHHHHHHHhcCCCeEEEE
Q 001017 779 QLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPK--QKALVTRLVKTKTSSTTLAI 856 (1189)
Q Consensus 779 ~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~~~~~~~~vv~~r~sP~--qK~~iV~~l~~~~~~~vl~i 856 (1189)
++.+.... ...|. --..+.+.+.- ....+++|
T Consensus 145 ---------------------~~~~~~~~------------------------~~kp~~~~~~~~~~~~~~-~~~~~~~v 178 (233)
T 3umb_A 145 ---------------------VLSVDAVR------------------------LYKTAPAAYALAPRAFGV-PAAQILFV 178 (233)
T ss_dssp ---------------------EEEGGGTT------------------------CCTTSHHHHTHHHHHHTS-CGGGEEEE
T ss_pred ---------------------EEEecccC------------------------CCCcCHHHHHHHHHHhCC-CcccEEEE
Confidence 11110000 00111 11122223321 34789999
Q ss_pred cCCCCChhhhhhcCeeEEecC---CcchhhhhccccccccchhhHHHH
Q 001017 857 GDGANDVGMLQEADIGVGISG---VEGMQAVMSSDIAIAQFRFLERLL 901 (1189)
Q Consensus 857 GDG~ND~~ml~~A~vGI~i~g---~~~~~a~~~sD~~i~~f~~l~~ll 901 (1189)
||+.||+.|.+.|++++.+-. +.....+..+|+++.++.-+..+|
T Consensus 179 GD~~~Di~~a~~~G~~~~~v~~~~~~~~~~~~~~~~v~~~~~el~~~l 226 (233)
T 3umb_A 179 SSNGWDACGATWHGFTTFWINRLGHPPEALDVAPAAAGHDMRDLLQFV 226 (233)
T ss_dssp ESCHHHHHHHHHHTCEEEEECTTCCCCCSSSCCCSEEESSHHHHHHHH
T ss_pred eCCHHHHHHHHHcCCEEEEEcCCCCCchhccCCCCEEECCHHHHHHHH
Confidence 999999999999999998722 222223567999999988887763
No 78
>2fea_A 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; 2633731, structural genomics, joint center for structural GE JCSG; HET: MSE; 2.00A {Bacillus subtilis} SCOP: c.108.1.20
Probab=97.56 E-value=9.8e-05 Score=79.26 Aligned_cols=136 Identities=13% Similarity=0.148 Sum_probs=86.9
Q ss_pred ccCCCCcHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcccCCceEEEEeCCCCcccccchhhHHHHHHHHHHHhHHH
Q 001017 699 DKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLH 778 (1189)
Q Consensus 699 D~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 778 (1189)
-++.||+.++++.|+++|+++.++|+.....+..+.. |+... ..++.-....
T Consensus 76 ~~~~pg~~~~l~~L~~~g~~~~ivS~~~~~~~~~~l~--~l~~~-~~v~~~~~~~------------------------- 127 (236)
T 2fea_A 76 AKIREGFREFVAFINEHEIPFYVISGGMDFFVYPLLE--GIVEK-DRIYCNHASF------------------------- 127 (236)
T ss_dssp CCBCTTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHT--TTSCG-GGEEEEEEEC-------------------------
T ss_pred CCCCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHh--cCCCC-CeEEeeeeEE-------------------------
Confidence 3688999999999999999999999999888888877 66432 2222111100
Q ss_pred HHhhhhhccccCCCCCCCeEEEEcCchhhhh-hhHHHHHHHHHHHhccceeEEEeCCcccHHHHHHHHHhcCCCeEEEEc
Q 001017 779 QLIRGKELLDSSNESLGPLALIIDGKSLTYA-LEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIG 857 (1189)
Q Consensus 779 ~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~-~~~~~~~~~~~~~~~~~~vv~~r~sP~qK~~iV~~l~~~~~~~vl~iG 857 (1189)
.+..+... ..+ ....+.+-....|..+++.+.- ....+++||
T Consensus 128 -----------------------~~~~~~~~~~kp-------------~p~~~~~~~~~~K~~~~~~~~~-~~~~~~~vG 170 (236)
T 2fea_A 128 -----------------------DNDYIHIDWPHS-------------CKGTCSNQCGCCKPSVIHELSE-PNQYIIMIG 170 (236)
T ss_dssp -----------------------SSSBCEEECTTC-------------CCTTCCSCCSSCHHHHHHHHCC-TTCEEEEEE
T ss_pred -----------------------cCCceEEecCCC-------------CccccccccCCcHHHHHHHHhc-cCCeEEEEe
Confidence 00000000 000 0000111124578888888764 567899999
Q ss_pred CCCCChhhhhhcCeeEEecCCcchhhhh--ccccccccchhhHHH
Q 001017 858 DGANDVGMLQEADIGVGISGVEGMQAVM--SSDIAIAQFRFLERL 900 (1189)
Q Consensus 858 DG~ND~~ml~~A~vGI~i~g~~~~~a~~--~sD~~i~~f~~l~~l 900 (1189)
|+.+|+.|.+.|++.+...+.. ..... .+|+++.++.-+..+
T Consensus 171 Ds~~Di~~a~~aG~~~~~~~~~-~~~~~~~~~~~~~~~~~el~~~ 214 (236)
T 2fea_A 171 DSVTDVEAAKLSDLCFARDYLL-NECREQNLNHLPYQDFYEIRKE 214 (236)
T ss_dssp CCGGGHHHHHTCSEEEECHHHH-HHHHHTTCCEECCSSHHHHHHH
T ss_pred CChHHHHHHHhCCeeeechHHH-HHHHHCCCCeeecCCHHHHHHH
Confidence 9999999999999988643321 11222 278888887777665
No 79
>3um9_A Haloacid dehalogenase, type II; haloacid dehalogenase-like hydrolase protein superfamily, defluorinase, hydrolase; 2.19A {Polaromonas SP}
Probab=97.55 E-value=6.1e-05 Score=80.02 Aligned_cols=120 Identities=17% Similarity=0.071 Sum_probs=82.3
Q ss_pred ccCCCCcHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcccCCceEEEEeCCCCcccccchhhHHHHHHHHHHHhHHH
Q 001017 699 DKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLH 778 (1189)
Q Consensus 699 D~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 778 (1189)
-++.+++.++++.|++.|+++.++|+.....+..+...+|+...-..
T Consensus 95 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~--------------------------------- 141 (230)
T 3um9_A 95 LTPFADVPQALQQLRAAGLKTAILSNGSRHSIRQVVGNSGLTNSFDH--------------------------------- 141 (230)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHTCGGGCSE---------------------------------
T ss_pred CCCCCCHHHHHHHHHhCCCeEEEEeCCCHHHHHHHHHHCCChhhcce---------------------------------
Confidence 46789999999999999999999999998888888888887431111
Q ss_pred HHhhhhhccccCCCCCCCeEEEEcCchhhhhhhHHHHHHHHHHHhccceeEEEeCCc--ccHHHHHHHHHhc---CCCeE
Q 001017 779 QLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSP--KQKALVTRLVKTK---TSSTT 853 (1189)
Q Consensus 779 ~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~~~~~~~~vv~~r~sP--~qK~~iV~~l~~~---~~~~v 853 (1189)
+ +.+...+ .-|..+++.+.+. ....+
T Consensus 142 ---------------------~----------------------------~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~ 172 (230)
T 3um9_A 142 ---------------------L----------------------------ISVDEVRLFKPHQKVYELAMDTLHLGESEI 172 (230)
T ss_dssp ---------------------E----------------------------EEGGGTTCCTTCHHHHHHHHHHHTCCGGGE
T ss_pred ---------------------e----------------------------EehhhcccCCCChHHHHHHHHHhCCCcccE
Confidence 1 1111111 1122333322222 34789
Q ss_pred EEEcCCCCChhhhhhcCeeEEecCC---cchhhhhccccccccchhhHHH
Q 001017 854 LAIGDGANDVGMLQEADIGVGISGV---EGMQAVMSSDIAIAQFRFLERL 900 (1189)
Q Consensus 854 l~iGDG~ND~~ml~~A~vGI~i~g~---~~~~a~~~sD~~i~~f~~l~~l 900 (1189)
++|||+.||+.|.+.|++++.+-.. .....+..+|+++.++.-+..+
T Consensus 173 ~~iGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~ 222 (230)
T 3um9_A 173 LFVSCNSWDATGAKYFGYPVCWINRSNGVFDQLGVVPDIVVSDVGVLASR 222 (230)
T ss_dssp EEEESCHHHHHHHHHHTCCEEEECTTSCCCCCSSCCCSEEESSHHHHHHT
T ss_pred EEEeCCHHHHHHHHHCCCEEEEEeCCCCccccccCCCcEEeCCHHHHHHH
Confidence 9999999999999999999877322 1122346789999887776654
No 80
>2wf7_A Beta-PGM, beta-phosphoglucomutase; transition state analogue, haloacid dehalogenase superfamily, isomerase, phosphotransferase; HET: G7P; 1.05A {Lactococcus lactis} PDB: 1o03_A* 1z4n_A* 1z4o_A* 1zol_A 2wf5_A* 2wf6_A* 1o08_A* 2wf8_A* 2wf9_A* 2wfa_A 2whe_A 1lvh_A* 3fm9_A
Probab=97.54 E-value=5.6e-05 Score=79.70 Aligned_cols=46 Identities=7% Similarity=0.057 Sum_probs=37.5
Q ss_pred CCeEEEEcCCCCChhhhhhcCeeEEecCCcchhhhhccccccccchhh
Q 001017 850 SSTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQFRFL 897 (1189)
Q Consensus 850 ~~~vl~iGDG~ND~~ml~~A~vGI~i~g~~~~~a~~~sD~~i~~f~~l 897 (1189)
...+++|||+.||+.|++.|++++++.+... ..+ .||+++.++.-+
T Consensus 162 ~~~~i~iGD~~nDi~~a~~aG~~~~~~~~~~-~~~-~a~~v~~~~~el 207 (221)
T 2wf7_A 162 PSESIGLEDSQAGIQAIKDSGALPIGVGRPE-DLG-DDIVIVPDTSHY 207 (221)
T ss_dssp GGGEEEEESSHHHHHHHHHHTCEEEEESCHH-HHC-SSSEEESSGGGC
T ss_pred hhHeEEEeCCHHHHHHHHHCCCEEEEECCHH-Hhc-cccchhcCHHhC
Confidence 4689999999999999999999998865433 244 899998876654
No 81
>3kzx_A HAD-superfamily hydrolase, subfamily IA, variant; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ehrlich chaffeensis; 1.90A {Ehrlichia chaffeensis}
Probab=97.54 E-value=0.00013 Score=77.68 Aligned_cols=116 Identities=16% Similarity=0.146 Sum_probs=78.9
Q ss_pred ccCCCCcHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcccCCceEEEEeCCCCcccccchhhHHHHHHHHHHHhHHH
Q 001017 699 DKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLH 778 (1189)
Q Consensus 699 D~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 778 (1189)
-.+.+++.++++.|++.|+++.++|+.....+..+.+.+|+...-..
T Consensus 102 ~~~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~f~~--------------------------------- 148 (231)
T 3kzx_A 102 FMLNDGAIELLDTLKENNITMAIVSNKNGERLRSEIHHKNLTHYFDS--------------------------------- 148 (231)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCGGGCSE---------------------------------
T ss_pred ceECcCHHHHHHHHHHCCCeEEEEECCCHHHHHHHHHHCCchhheee---------------------------------
Confidence 35789999999999999999999999999888888888887431111
Q ss_pred HHhhhhhccccCCCCCCCeEEEEcCchhhhhhhHHHHHHHHHHHhccceeEEEeCCcccH------HHHHHHHHhcCCC-
Q 001017 779 QLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQK------ALVTRLVKTKTSS- 851 (1189)
Q Consensus 779 ~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~~~~~~~~vv~~r~sP~qK------~~iV~~l~~~~~~- 851 (1189)
++++.-.+..| ..+.+.+.- ...
T Consensus 149 -------------------------------------------------i~~~~~~~~~Kp~~~~~~~~~~~lgi-~~~~ 178 (231)
T 3kzx_A 149 -------------------------------------------------IIGSGDTGTIKPSPEPVLAALTNINI-EPSK 178 (231)
T ss_dssp -------------------------------------------------EEEETSSSCCTTSSHHHHHHHHHHTC-CCST
T ss_pred -------------------------------------------------EEcccccCCCCCChHHHHHHHHHcCC-Cccc
Confidence 11221111111 223333322 334
Q ss_pred eEEEEcCCCCChhhhhhcCe-eEEecCCcchhhhhccccccccchhhHHHH
Q 001017 852 TTLAIGDGANDVGMLQEADI-GVGISGVEGMQAVMSSDIAIAQFRFLERLL 901 (1189)
Q Consensus 852 ~vl~iGDG~ND~~ml~~A~v-GI~i~g~~~~~a~~~sD~~i~~f~~l~~ll 901 (1189)
.+++|||+.||+.|.++|++ +|.+..... ..+|+++.+++-|..+|
T Consensus 179 ~~v~vGD~~~Di~~a~~aG~~~v~~~~~~~----~~~~~~~~~~~el~~~l 225 (231)
T 3kzx_A 179 EVFFIGDSISDIQSAIEAGCLPIKYGSTNI----IKDILSFKNFYDIRNFI 225 (231)
T ss_dssp TEEEEESSHHHHHHHHHTTCEEEEECC---------CCEEESSHHHHHHHH
T ss_pred CEEEEcCCHHHHHHHHHCCCeEEEECCCCC----CCCceeeCCHHHHHHHH
Confidence 79999999999999999997 556633222 36788888888777663
No 82
>2om6_A Probable phosphoserine phosphatase; rossmann fold, B-hairpin, four-helix bundle, structural GENO NPPSFA; 2.20A {Pyrococcus horikoshii}
Probab=97.53 E-value=0.00013 Score=77.66 Aligned_cols=121 Identities=12% Similarity=0.079 Sum_probs=79.4
Q ss_pred cCCCCcHHHHHHHHHcCCeEEEEcCCC---hhhHHHHHHHcCcccCCceEEEEeCCCCcccccchhhHHHHHHHHHHHhH
Q 001017 700 KLQNGVPECIDKLAQAGIKLWVLTGDK---METAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASV 776 (1189)
Q Consensus 700 ~lr~~v~~~I~~L~~aGIkv~mlTGD~---~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 776 (1189)
.+.+++.++++.|++.|+++.++|+.. ...+.......|+...-..
T Consensus 99 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~~~~l~~~~l~~~f~~------------------------------- 147 (235)
T 2om6_A 99 LVLEGTKEALQFVKERGLKTAVIGNVMFWPGSYTRLLLERFGLMEFIDK------------------------------- 147 (235)
T ss_dssp GBCTTHHHHHHHHHHTTCEEEEEECCCSSCHHHHHHHHHHTTCGGGCSE-------------------------------
T ss_pred CcCccHHHHHHHHHHCCCEEEEEcCCcccchhHHHHHHHhCCcHHHhhh-------------------------------
Confidence 458999999999999999999999998 7777777777776431110
Q ss_pred HHHHhhhhhccccCCCCCCCeEEEEcCchhhhhhhHHHHHHHHHHHhccceeEEEeCCcccHHHHHHHHHhc---CCCeE
Q 001017 777 LHQLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTK---TSSTT 853 (1189)
Q Consensus 777 ~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~~~~~~~~vv~~r~sP~qK~~iV~~l~~~---~~~~v 853 (1189)
++.+.... ...| |..+.+.+.+. ..+.+
T Consensus 148 -----------------------~~~~~~~~------------------------~~kp--~~~~~~~~~~~lgi~~~~~ 178 (235)
T 2om6_A 148 -----------------------TFFADEVL------------------------SYKP--RKEMFEKVLNSFEVKPEES 178 (235)
T ss_dssp -----------------------EEEHHHHT------------------------CCTT--CHHHHHHHHHHTTCCGGGE
T ss_pred -----------------------heeccccC------------------------CCCC--CHHHHHHHHHHcCCCccce
Confidence 11100000 0111 12222222222 34789
Q ss_pred EEEcCCC-CChhhhhhcCeeEEecC--CcchhhhhccccccccchhhHHH
Q 001017 854 LAIGDGA-NDVGMLQEADIGVGISG--VEGMQAVMSSDIAIAQFRFLERL 900 (1189)
Q Consensus 854 l~iGDG~-ND~~ml~~A~vGI~i~g--~~~~~a~~~sD~~i~~f~~l~~l 900 (1189)
++|||+. ||+.|.+.|++++++-. ......+..+|+++.++.-+..+
T Consensus 179 ~~iGD~~~nDi~~a~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~ 228 (235)
T 2om6_A 179 LHIGDTYAEDYQGARKVGMWAVWINQEGDKVRKLEERGFEIPSIANLKDV 228 (235)
T ss_dssp EEEESCTTTTHHHHHHTTSEEEEECTTCCSCEEEETTEEEESSGGGHHHH
T ss_pred EEECCChHHHHHHHHHCCCEEEEECCCCCCcccCCCCcchHhhHHHHHHH
Confidence 9999999 99999999999998732 22222344588888887776665
No 83
>1swv_A Phosphonoacetaldehyde hydrolase; HAD enzyme superfamily, phosphonotase, metal binding; 2.30A {Bacillus cereus} SCOP: c.108.1.3 PDB: 1sww_A 2iof_A* 2ioh_A 1rql_A 1rqn_A 2iof_K* 1rdf_A 1fez_A
Probab=97.52 E-value=5.8e-05 Score=82.48 Aligned_cols=40 Identities=33% Similarity=0.315 Sum_probs=34.9
Q ss_pred cCCCCcHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCc
Q 001017 700 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSL 739 (1189)
Q Consensus 700 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi 739 (1189)
.+.+++.++++.|++.|+++.++|++....+..+...+|+
T Consensus 103 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~~ 142 (267)
T 1swv_A 103 SPINGVKEVIASLRERGIKIGSTTGYTREMMDIVAKEAAL 142 (267)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEBCSSCHHHHHHHHHHHHH
T ss_pred ccCccHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHcCC
Confidence 5679999999999999999999999998877777776665
No 84
>2hcf_A Hydrolase, haloacid dehalogenase-like family; NP_662590.1, ST genomics, PSI-2, protein structure initiative; 1.80A {Chlorobaculum tepidum} SCOP: c.108.1.6
Probab=97.52 E-value=0.0001 Score=78.54 Aligned_cols=41 Identities=24% Similarity=0.207 Sum_probs=36.8
Q ss_pred cCCCCcHHHHHHHHHc-CCeEEEEcCCChhhHHHHHHHcCcc
Q 001017 700 KLQNGVPECIDKLAQA-GIKLWVLTGDKMETAINIGFACSLL 740 (1189)
Q Consensus 700 ~lr~~v~~~I~~L~~a-GIkv~mlTGD~~~ta~~ia~~~gi~ 740 (1189)
++.+++.++++.|++. |+++.++|+.....+..+...+|+.
T Consensus 93 ~~~~~~~~~l~~l~~~~g~~~~i~t~~~~~~~~~~l~~~~l~ 134 (234)
T 2hcf_A 93 TLLEGVRELLDALSSRSDVLLGLLTGNFEASGRHKLKLPGID 134 (234)
T ss_dssp EECTTHHHHHHHHHTCTTEEEEEECSSCHHHHHHHHHTTTCS
T ss_pred CcCCCHHHHHHHHHhCCCceEEEEcCCcHHHHHHHHHHCCch
Confidence 4679999999999999 9999999999988888888888874
No 85
>3nuq_A Protein SSM1, putative nucleotide phosphatase; suppresses the 6-AU sensitivity of transcription elongation II; 1.70A {Saccharomyces cerevisiae} PDB: 3onn_A 3opx_A*
Probab=97.51 E-value=8.4e-05 Score=82.08 Aligned_cols=125 Identities=15% Similarity=0.047 Sum_probs=82.6
Q ss_pred cCCCCcHHHHHHHHHcCC--eEEEEcCCChhhHHHHHHHcCcccCCceEEEEeCCCCcccccchhhHHHHHHHHHHHhHH
Q 001017 700 KLQNGVPECIDKLAQAGI--KLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVL 777 (1189)
Q Consensus 700 ~lr~~v~~~I~~L~~aGI--kv~mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 777 (1189)
++.+++.++++.|++.|+ +++++|+.....+..+...+|+...-..+
T Consensus 142 ~~~p~~~~~L~~L~~~g~~~~l~i~Tn~~~~~~~~~l~~~gl~~~fd~v------------------------------- 190 (282)
T 3nuq_A 142 KPDIPLRNMLLRLRQSGKIDKLWLFTNAYKNHAIRCLRLLGIADLFDGL------------------------------- 190 (282)
T ss_dssp CCCHHHHHHHHHHHHSSSCSEEEEECSSCHHHHHHHHHHHTCTTSCSEE-------------------------------
T ss_pred CcChhHHHHHHHHHhCCCCceEEEEECCChHHHHHHHHhCCcccccceE-------------------------------
Confidence 567899999999999999 99999999998888888888874321111
Q ss_pred HHHhhhhhccccCCCCCCCeEEEEcCchhhhhhhHHHHHHHHHHHhccceeEEEeCCcccHHHHHHHHHhc---CC-CeE
Q 001017 778 HQLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTK---TS-STT 853 (1189)
Q Consensus 778 ~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~~~~~~~~vv~~r~sP~qK~~iV~~l~~~---~~-~~v 853 (1189)
+.+..... .. ..+.-|..+++.+.+. .. +.+
T Consensus 191 -----------------------~~~~~~~~--------------------~~--~~~Kp~~~~~~~~~~~lgi~~~~~~ 225 (282)
T 3nuq_A 191 -----------------------TYCDYSRT--------------------DT--LVCKPHVKAFEKAMKESGLARYENA 225 (282)
T ss_dssp -----------------------ECCCCSSC--------------------SS--CCCTTSHHHHHHHHHHHTCCCGGGE
T ss_pred -----------------------EEeccCCC--------------------cc--cCCCcCHHHHHHHHHHcCCCCcccE
Confidence 10000000 00 1122234444433332 34 789
Q ss_pred EEEcCCCCChhhhhhcCeeEEecCCcch-----hhhhccccccccchhhHHH
Q 001017 854 LAIGDGANDVGMLQEADIGVGISGVEGM-----QAVMSSDIAIAQFRFLERL 900 (1189)
Q Consensus 854 l~iGDG~ND~~ml~~A~vGI~i~g~~~~-----~a~~~sD~~i~~f~~l~~l 900 (1189)
++|||+.||+.|.++|++|+++...... .....+|+++.++.-|..+
T Consensus 226 i~vGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~ad~vi~sl~el~~~ 277 (282)
T 3nuq_A 226 YFIDDSGKNIETGIKLGMKTCIHLVENEVNEILGQTPEGAIVISDILELPHV 277 (282)
T ss_dssp EEEESCHHHHHHHHHHTCSEEEEECSCCC----CCCCTTCEEESSGGGGGGT
T ss_pred EEEcCCHHHHHHHHHCCCeEEEEEcCCccccccccCCCCCEEeCCHHHHHHH
Confidence 9999999999999999998766433221 1134789999887776654
No 86
>3iru_A Phoshonoacetaldehyde hydrolase like protein; phosphonoacetaldehyde hydrolase like P structural genomics, PSI-2, protein structure initiative; 2.30A {Oleispira antarctica} SCOP: c.108.1.0
Probab=97.44 E-value=0.00013 Score=79.98 Aligned_cols=41 Identities=29% Similarity=0.165 Sum_probs=36.6
Q ss_pred cCCCCcHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcc
Q 001017 700 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLL 740 (1189)
Q Consensus 700 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~ 740 (1189)
++.+++.++++.|++.|+++.++|+.....+..+...+|+.
T Consensus 111 ~~~~~~~~~l~~l~~~g~~~~i~tn~~~~~~~~~l~~~~~~ 151 (277)
T 3iru_A 111 QLIPGWKEVFDKLIAQGIKVGGNTGYGPGMMAPALIAAKEQ 151 (277)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHHHT
T ss_pred ccCcCHHHHHHHHHHcCCeEEEEeCCchHHHHHHHHhcCcc
Confidence 57899999999999999999999999988888888777764
No 87
>2hdo_A Phosphoglycolate phosphatase; NP_784602.1, structur genomics, PSI-2, protein structure initiative, joint center structural genomics; HET: MSE; 1.50A {Lactobacillus plantarum} SCOP: c.108.1.6
Probab=97.43 E-value=5.5e-05 Score=79.28 Aligned_cols=40 Identities=13% Similarity=0.238 Sum_probs=35.9
Q ss_pred cCCCCcHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcc
Q 001017 700 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLL 740 (1189)
Q Consensus 700 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~ 740 (1189)
++.+++.++++.|++. +++.++|+.....+..+.+.+|+.
T Consensus 83 ~~~~~~~~~l~~l~~~-~~~~i~s~~~~~~~~~~l~~~~l~ 122 (209)
T 2hdo_A 83 ELYPGITSLFEQLPSE-LRLGIVTSQRRNELESGMRSYPFM 122 (209)
T ss_dssp EECTTHHHHHHHSCTT-SEEEEECSSCHHHHHHHHTTSGGG
T ss_pred CcCCCHHHHHHHHHhc-CcEEEEeCCCHHHHHHHHHHcChH
Confidence 5789999999999999 999999999988888888888773
No 88
>3ed5_A YFNB; APC60080, bacillus subtilis subsp. subtilis STR. 168, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.72A {Bacillus subtilis} PDB: 3i76_A
Probab=97.43 E-value=0.00055 Score=72.87 Aligned_cols=122 Identities=19% Similarity=0.143 Sum_probs=82.0
Q ss_pred ccCCCCcHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcccCCceEEEEeCCCCcccccchhhHHHHHHHHHHHhHHH
Q 001017 699 DKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLH 778 (1189)
Q Consensus 699 D~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 778 (1189)
-++.+++.++++.|++. +++.++|+.....+......+|+...-..
T Consensus 102 ~~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~l~~~f~~--------------------------------- 147 (238)
T 3ed5_A 102 HQLIDGAFDLISNLQQQ-FDLYIVTNGVSHTQYKRLRDSGLFPFFKD--------------------------------- 147 (238)
T ss_dssp CCBCTTHHHHHHHHHTT-SEEEEEECSCHHHHHHHHHHTTCGGGCSE---------------------------------
T ss_pred CCCCccHHHHHHHHHhc-CeEEEEeCCCHHHHHHHHHHcChHhhhhe---------------------------------
Confidence 35789999999999999 99999999998888888888887432111
Q ss_pred HHhhhhhccccCCCCCCCeEEEEcCchhhhhhhHHHHHHHHHHHhccceeEEEeCCcccHHHHHHHHHhcCC----CeEE
Q 001017 779 QLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTS----STTL 854 (1189)
Q Consensus 779 ~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~~~~~~~~vv~~r~sP~qK~~iV~~l~~~~~----~~vl 854 (1189)
++.+.... ...-|..+++.+.+..| +.++
T Consensus 148 ---------------------~~~~~~~~--------------------------~~kp~~~~~~~~~~~~g~~~~~~~i 180 (238)
T 3ed5_A 148 ---------------------IFVSEDTG--------------------------FQKPMKEYFNYVFERIPQFSAEHTL 180 (238)
T ss_dssp ---------------------EEEGGGTT--------------------------SCTTCHHHHHHHHHTSTTCCGGGEE
T ss_pred ---------------------EEEecccC--------------------------CCCCChHHHHHHHHHcCCCChhHeE
Confidence 11110000 01112333333332233 6899
Q ss_pred EEcCCC-CChhhhhhcCeeE-EecC-CcchhhhhccccccccchhhHHHH
Q 001017 855 AIGDGA-NDVGMLQEADIGV-GISG-VEGMQAVMSSDIAIAQFRFLERLL 901 (1189)
Q Consensus 855 ~iGDG~-ND~~ml~~A~vGI-~i~g-~~~~~a~~~sD~~i~~f~~l~~ll 901 (1189)
+|||+. ||+.|.+.|+++. .+.. ......+..+|+++.++.-+..+|
T Consensus 181 ~vGD~~~~Di~~a~~aG~~~i~~~~~~~~~~~~~~ad~v~~~~~el~~~l 230 (238)
T 3ed5_A 181 IIGDSLTADIKGGQLAGLDTCWMNPDMKPNVPEIIPTYEIRKLEELYHIL 230 (238)
T ss_dssp EEESCTTTTHHHHHHTTCEEEEECTTCCCCTTCCCCSEEESSGGGHHHHH
T ss_pred EECCCcHHHHHHHHHCCCEEEEECCCCCCCcccCCCCeEECCHHHHHHHH
Confidence 999998 9999999999954 4432 212224567899999988887773
No 89
>2hoq_A Putative HAD-hydrolase PH1655; haloacid dehalogenase, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.70A {Pyrococcus horikoshii}
Probab=97.41 E-value=0.00051 Score=73.65 Aligned_cols=41 Identities=15% Similarity=0.124 Sum_probs=36.7
Q ss_pred cCCCCcHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcc
Q 001017 700 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLL 740 (1189)
Q Consensus 700 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~ 740 (1189)
++.+++.++++.|++.|+++.++|+.....+..+...+|+.
T Consensus 94 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~ 134 (241)
T 2hoq_A 94 REVPGARKVLIRLKELGYELGIITDGNPVKQWEKILRLELD 134 (241)
T ss_dssp CBCTTHHHHHHHHHHHTCEEEEEECSCHHHHHHHHHHTTCG
T ss_pred CCCccHHHHHHHHHHCCCEEEEEECCCchhHHHHHHHcCcH
Confidence 46799999999999999999999999888888888888874
No 90
>2no4_A (S)-2-haloacid dehalogenase IVA; HAD superfamily, rossman fold, hydrol; 1.93A {Burkholderia cepacia} PDB: 2no5_A*
Probab=97.40 E-value=0.00017 Score=77.33 Aligned_cols=41 Identities=22% Similarity=0.143 Sum_probs=37.6
Q ss_pred cCCCCcHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcc
Q 001017 700 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLL 740 (1189)
Q Consensus 700 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~ 740 (1189)
++.+++.++++.|++.|+++.++|+.....+..+...+|+.
T Consensus 105 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~ 145 (240)
T 2no4_A 105 SAYPDAAETLEKLKSAGYIVAILSNGNDEMLQAALKASKLD 145 (240)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCG
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHhcCcH
Confidence 57899999999999999999999999998888888888874
No 91
>4eek_A Beta-phosphoglucomutase-related protein; hydrolase, magnesium binding site, enzyme function initiativ; 1.60A {Deinococcus radiodurans} PDB: 4eel_A* 4een_A
Probab=97.39 E-value=0.00012 Score=79.52 Aligned_cols=42 Identities=14% Similarity=0.066 Sum_probs=37.6
Q ss_pred cccCCCCcHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCc
Q 001017 698 EDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSL 739 (1189)
Q Consensus 698 eD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi 739 (1189)
.-++.+++.++++.|++.|++++++|+.....+..+.+..|+
T Consensus 108 ~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l 149 (259)
T 4eek_A 108 GVTAIEGAAETLRALRAAGVPFAIGSNSERGRLHLKLRVAGL 149 (259)
T ss_dssp TCEECTTHHHHHHHHHHHTCCEEEECSSCHHHHHHHHHHTTC
T ss_pred cCCcCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHhcCh
Confidence 345789999999999999999999999999888888888886
No 92
>3u26_A PF00702 domain protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, unknown function; 1.59A {Pyrococcus horikoshii} SCOP: c.108.1.1 PDB: 1x42_A
Probab=97.37 E-value=0.00027 Score=75.08 Aligned_cols=120 Identities=16% Similarity=0.155 Sum_probs=79.8
Q ss_pred cCCCCcHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcccCCceEEEEeCCCCcccccchhhHHHHHHHHHHHhHHHH
Q 001017 700 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQ 779 (1189)
Q Consensus 700 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 779 (1189)
++.+++.++++.|++. +++.++|+.....+..+....|+...-..
T Consensus 100 ~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~~~~~f~~---------------------------------- 144 (234)
T 3u26_A 100 ELYPEVVEVLKSLKGK-YHVGMITDSDTEQAMAFLDALGIKDLFDS---------------------------------- 144 (234)
T ss_dssp CBCTTHHHHHHHHTTT-SEEEEEESSCHHHHHHHHHHTTCGGGCSE----------------------------------
T ss_pred CcCcCHHHHHHHHHhC-CcEEEEECCCHHHHHHHHHHcCcHHHcce----------------------------------
Confidence 4679999999999999 99999999999888888888887431111
Q ss_pred HhhhhhccccCCCCCCCeEEEEcCchhhhhhhHHHHHHHHHHHhccceeEEEeCCcccHHHHHHHHHhc---CCCeEEEE
Q 001017 780 LIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTK---TSSTTLAI 856 (1189)
Q Consensus 780 ~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~~~~~~~~vv~~r~sP~qK~~iV~~l~~~---~~~~vl~i 856 (1189)
++.+... ....| |..+++.+.+. ....+++|
T Consensus 145 --------------------~~~~~~~------------------------~~~kp--~~~~~~~~~~~~~~~~~~~~~v 178 (234)
T 3u26_A 145 --------------------ITTSEEA------------------------GFFKP--HPRIFELALKKAGVKGEEAVYV 178 (234)
T ss_dssp --------------------EEEHHHH------------------------TBCTT--SHHHHHHHHHHHTCCGGGEEEE
T ss_pred --------------------eEecccc------------------------CCCCc--CHHHHHHHHHHcCCCchhEEEE
Confidence 1110000 00111 12222222222 34789999
Q ss_pred cCCC-CChhhhhhcCe---eEEecCCcchhhhhccccccccchhhHHHH
Q 001017 857 GDGA-NDVGMLQEADI---GVGISGVEGMQAVMSSDIAIAQFRFLERLL 901 (1189)
Q Consensus 857 GDG~-ND~~ml~~A~v---GI~i~g~~~~~a~~~sD~~i~~f~~l~~ll 901 (1189)
||+. ||+.|.+.|++ +|++.+. ....+..+|+++.++.-+..+|
T Consensus 179 GD~~~~Di~~a~~aG~~~~~v~~~~~-~~~~~~~a~~~~~~~~el~~~l 226 (234)
T 3u26_A 179 GDNPVKDCGGSKNLGMTSILLDRKGE-KREFWDKCDFIVSDLREVIKIV 226 (234)
T ss_dssp ESCTTTTHHHHHTTTCEEEEECSSST-TGGGGGGCSEEESSTHHHHHHH
T ss_pred cCCcHHHHHHHHHcCCEEEEECCCCC-ccccccCCCEeeCCHHHHHHHH
Confidence 9997 99999999995 4444332 2224558999999988777664
No 93
>2ah5_A COG0546: predicted phosphatases; MCSG, structural genomics, hydrola haloacid dehalogenase-like, PSI; 1.74A {Streptococcus pneumoniae} SCOP: c.108.1.6
Probab=97.35 E-value=0.00026 Score=74.26 Aligned_cols=118 Identities=15% Similarity=0.139 Sum_probs=79.8
Q ss_pred cCCCCcHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcccCCceEEEEeCCCCcccccchhhHHHHHHHHHHHhHHHH
Q 001017 700 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQ 779 (1189)
Q Consensus 700 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 779 (1189)
++.||+.++++.|++ |+++.++|+.....+..+-+.+|+...-.
T Consensus 84 ~~~~g~~~~l~~L~~-~~~l~i~T~~~~~~~~~~l~~~gl~~~f~----------------------------------- 127 (210)
T 2ah5_A 84 QLFPQIIDLLEELSS-SYPLYITTTKDTSTAQDMAKNLEIHHFFD----------------------------------- 127 (210)
T ss_dssp EECTTHHHHHHHHHT-TSCEEEEEEEEHHHHHHHHHHTTCGGGCS-----------------------------------
T ss_pred CCCCCHHHHHHHHHc-CCeEEEEeCCCHHHHHHHHHhcCchhhee-----------------------------------
Confidence 577999999999999 99999999998888888888888743211
Q ss_pred HhhhhhccccCCCCCCCeEEEEcCchhhhhhhHHHHHHHHHHHhccceeEEEeCCcccHHHHHHHHHhcCC---CeEEEE
Q 001017 780 LIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTS---STTLAI 856 (1189)
Q Consensus 780 ~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~~~~~~~~vv~~r~sP~qK~~iV~~l~~~~~---~~vl~i 856 (1189)
.++++.-.+.-|..+.+.+.+..| +.+++|
T Consensus 128 -----------------------------------------------~i~~~~~~~Kp~p~~~~~~~~~lg~~p~~~~~v 160 (210)
T 2ah5_A 128 -----------------------------------------------GIYGSSPEAPHKADVIHQALQTHQLAPEQAIII 160 (210)
T ss_dssp -----------------------------------------------EEEEECSSCCSHHHHHHHHHHHTTCCGGGEEEE
T ss_pred -----------------------------------------------eeecCCCCCCCChHHHHHHHHHcCCCcccEEEE
Confidence 113332122335555554444333 679999
Q ss_pred cCCCCChhhhhhcCee-EEec-CCc-chhhh-hccccccccchhhHHH
Q 001017 857 GDGANDVGMLQEADIG-VGIS-GVE-GMQAV-MSSDIAIAQFRFLERL 900 (1189)
Q Consensus 857 GDG~ND~~ml~~A~vG-I~i~-g~~-~~~a~-~~sD~~i~~f~~l~~l 900 (1189)
||+.||+.|.++|++. |++. |.. ....+ ..+|+++.++.-+..+
T Consensus 161 gDs~~Di~~a~~aG~~~i~v~~~~~~~~~l~~~~a~~v~~~~~el~~~ 208 (210)
T 2ah5_A 161 GDTKFDMLGARETGIQKLAITWGFGEQADLLNYQPDYIAHKPLEVLAY 208 (210)
T ss_dssp ESSHHHHHHHHHHTCEEEEESSSSSCHHHHHTTCCSEEESSTTHHHHH
T ss_pred CCCHHHHHHHHHCCCcEEEEcCCCCCHHHHHhCCCCEEECCHHHHHHH
Confidence 9999999999999993 2442 222 11122 3589998887665543
No 94
>3l8h_A Putative haloacid dehalogenase-like hydrolase; HAD superfamily, GMHB, D-glycero-D-manno-heptose-1, 7-bispho phosphatase; HET: FX1; 1.68A {Bordetella bronchiseptica}
Probab=97.33 E-value=0.00018 Score=73.33 Aligned_cols=54 Identities=15% Similarity=0.118 Sum_probs=38.5
Q ss_pred CCCeEEEEcCCCCChhhhhhcCee-EEec-CCcchhhh----hccccccccchhhHHHHH
Q 001017 849 TSSTTLAIGDGANDVGMLQEADIG-VGIS-GVEGMQAV----MSSDIAIAQFRFLERLLL 902 (1189)
Q Consensus 849 ~~~~vl~iGDG~ND~~ml~~A~vG-I~i~-g~~~~~a~----~~sD~~i~~f~~l~~lll 902 (1189)
..+.+++|||+.||+.|.++|++. |++. |....... ..+|+++.++.-+..+|+
T Consensus 117 ~~~~~~~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~~~~d~v~~~l~el~~~l~ 176 (179)
T 3l8h_A 117 DLAGVPAVGDSLRDLQAAAQAGCAPWLVQTGNGRKTLAQGGLPEGTRVCEDLAAVAEQLL 176 (179)
T ss_dssp CCTTCEEEESSHHHHHHHHHHTCEEEEESTTTHHHHHHHCCCCTTEEEESSHHHHHHHHH
T ss_pred CHHHEEEECCCHHHHHHHHHCCCcEEEECCCCcchhhhhcccCCCcEEecCHHHHHHHHH
Confidence 447899999999999999999973 3443 22221122 457999999888877743
No 95
>1zrn_A L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseudomonas SP} SCOP: c.108.1.1 PDB: 1zrm_A 1jud_A 1qh9_A
Probab=97.33 E-value=0.00014 Score=77.35 Aligned_cols=41 Identities=20% Similarity=0.276 Sum_probs=37.3
Q ss_pred cCCCCcHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcc
Q 001017 700 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLL 740 (1189)
Q Consensus 700 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~ 740 (1189)
++.+++.++++.|++.|+++.++|+.....+..+...+|+.
T Consensus 95 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~ 135 (232)
T 1zrn_A 95 APFSEVPDSLRELKRRGLKLAILSNGSPQSIDAVVSHAGLR 135 (232)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCG
T ss_pred CCCccHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHhcChH
Confidence 57899999999999999999999999988888888888874
No 96
>2amy_A PMM 2, phosphomannomutase 2; HS.459855, HS.313504, BC008310, phosphatase, PFAM PF03332, H superfamily, jaecken disease; 2.09A {Homo sapiens} SCOP: c.108.1.10 PDB: 2q4r_A
Probab=97.32 E-value=0.00032 Score=75.74 Aligned_cols=58 Identities=19% Similarity=0.261 Sum_probs=43.0
Q ss_pred eCCcc--cHHHHHHHHHhcCCCeEEEEcC----CCCChhhhhhcCe-eEEecCCcchhhhhccccc
Q 001017 832 RSSPK--QKALVTRLVKTKTSSTTLAIGD----GANDVGMLQEADI-GVGISGVEGMQAVMSSDIA 890 (1189)
Q Consensus 832 r~sP~--qK~~iV~~l~~~~~~~vl~iGD----G~ND~~ml~~A~v-GI~i~g~~~~~a~~~sD~~ 890 (1189)
.+.|. .|+..++.+.....+.|+++|| |.||.+||+.|+. |++|.+. ....+..||++
T Consensus 181 eI~~~~~~Kg~al~~l~~i~~~~viafGD~~~~~~ND~~Ml~~a~~ag~av~Na-~~~vk~~A~~v 245 (246)
T 2amy_A 181 DVFPDGWDKRYCLRHVENDGYKTIYFFGDKTMPGGNDHEIFTDPRTMGYSVTAP-EDTRRICELLF 245 (246)
T ss_dssp EEEETTCSGGGGGGGTTTSCCSEEEEEECSCC---CCCHHHHCTTEEEEECSSH-HHHHHHHHHHC
T ss_pred EEecCCCchHHHHHHHhCCCHHHEEEECCCCCCCCCcHHHHHhCCcceEEeeCC-CHHHHHHHhhc
Confidence 34444 7999888882213478999999 9999999999987 9999654 34488888886
No 97
>3dv9_A Beta-phosphoglucomutase; structural genomics, APC60149, PSI- protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.72A {Bacteroides vulgatus}
Probab=97.31 E-value=0.00018 Score=77.26 Aligned_cols=41 Identities=17% Similarity=0.253 Sum_probs=31.8
Q ss_pred cccCCCCcHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCc
Q 001017 698 EDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSL 739 (1189)
Q Consensus 698 eD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi 739 (1189)
..++.+++.++++.|++.|+++.++|+.....+...... |+
T Consensus 106 ~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~-~l 146 (247)
T 3dv9_A 106 KAERMPGALEVLTKIKSEGLTPMVVTGSGQTSLLDRLNH-NF 146 (247)
T ss_dssp CCCBCTTHHHHHHHHHHTTCEEEEECSCC---CHHHHHH-HS
T ss_pred cCCCCCCHHHHHHHHHHcCCcEEEEcCCchHHHHHHHHh-hH
Confidence 346789999999999999999999999887666665555 65
No 98
>3qnm_A Haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 1.70A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0
Probab=97.29 E-value=0.00037 Score=74.25 Aligned_cols=123 Identities=19% Similarity=0.173 Sum_probs=83.0
Q ss_pred cCCCCcHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcccCCceEEEEeCCCCcccccchhhHHHHHHHHHHHhHHHH
Q 001017 700 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQ 779 (1189)
Q Consensus 700 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 779 (1189)
++.+++.++++.|+ .|+++.++|+.....+..+...+|+...-..
T Consensus 107 ~~~~~~~~~l~~l~-~g~~~~i~sn~~~~~~~~~l~~~~l~~~f~~---------------------------------- 151 (240)
T 3qnm_A 107 GLMPHAKEVLEYLA-PQYNLYILSNGFRELQSRKMRSAGVDRYFKK---------------------------------- 151 (240)
T ss_dssp CBSTTHHHHHHHHT-TTSEEEEEECSCHHHHHHHHHHHTCGGGCSE----------------------------------
T ss_pred CcCccHHHHHHHHH-cCCeEEEEeCCchHHHHHHHHHcChHhhcee----------------------------------
Confidence 57899999999999 9999999999988888888888776432111
Q ss_pred HhhhhhccccCCCCCCCeEEEEcCchhhhhhhHHHHHHHHHHHhccceeEEEeCC--cccHHHHHHHHHhcC---CCeEE
Q 001017 780 LIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSS--PKQKALVTRLVKTKT---SSTTL 854 (1189)
Q Consensus 780 ~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~~~~~~~~vv~~r~s--P~qK~~iV~~l~~~~---~~~vl 854 (1189)
+ +++... ..-|..+++.+.+.. .+.++
T Consensus 152 --------------------~----------------------------~~~~~~~~~kp~~~~~~~~~~~lgi~~~~~~ 183 (240)
T 3qnm_A 152 --------------------I----------------------------ILSEDLGVLKPRPEIFHFALSATQSELRESL 183 (240)
T ss_dssp --------------------E----------------------------EEGGGTTCCTTSHHHHHHHHHHTTCCGGGEE
T ss_pred --------------------E----------------------------EEeccCCCCCCCHHHHHHHHHHcCCCcccEE
Confidence 1 111111 111233333333223 37899
Q ss_pred EEcCCC-CChhhhhhcCeeEEecCCcch-hhhhccccccccchhhHHHHHHhhhh
Q 001017 855 AIGDGA-NDVGMLQEADIGVGISGVEGM-QAVMSSDIAIAQFRFLERLLLVHGHW 907 (1189)
Q Consensus 855 ~iGDG~-ND~~ml~~A~vGI~i~g~~~~-~a~~~sD~~i~~f~~l~~lll~~GR~ 907 (1189)
+|||+. ||+.|.+.|++++.+.+.... .....+|+++.++.-+..+ .+|+.
T Consensus 184 ~iGD~~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~d~vi~sl~e~~~~--~~~~~ 236 (240)
T 3qnm_A 184 MIGDSWEADITGAHGVGMHQAFYNVTERTVFPFQPTYHIHSLKELMNL--LEGHH 236 (240)
T ss_dssp EEESCTTTTHHHHHHTTCEEEEECCSCCCCCSSCCSEEESSTHHHHHH--TC---
T ss_pred EECCCchHhHHHHHHcCCeEEEEcCCCCCCcCCCCceEECCHHHHHHH--Hhccc
Confidence 999995 999999999999987544331 2456799999998877765 45543
No 99
>3qxg_A Inorganic pyrophosphatase; hydrolase, magnesium binding site, NEW YORK research center for structural genomics; HET: TLA; 1.24A {Bacteroides thetaiotaomicron} PDB: 3qu2_A* 3qx7_A 3quq_A* 3r9k_A 3qut_A 3qu9_A* 3qu7_A 3qu5_A 3qyp_A 3quc_A 3qub_A 3qu4_A
Probab=97.29 E-value=0.00018 Score=77.40 Aligned_cols=40 Identities=18% Similarity=0.174 Sum_probs=33.5
Q ss_pred ccCCCCcHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCc
Q 001017 699 DKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSL 739 (1189)
Q Consensus 699 D~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi 739 (1189)
-++.+++.++++.|++.|+++.++|+.....+...... |+
T Consensus 108 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~-~l 147 (243)
T 3qxg_A 108 AERMPGAWELLQKVKSEGLTPMVVTGSGQLSLLERLEH-NF 147 (243)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEECCCCCHHHHTTHHH-HS
T ss_pred CCCCCCHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHH-hH
Confidence 46789999999999999999999999887766655555 55
No 100
>3l5k_A Protein GS1, haloacid dehalogenase-like hydrolase domain- containing protein 1A; HDHD1A, haloacid dehalogenase-like hydrolase domain containing 1A; 2.00A {Homo sapiens}
Probab=97.26 E-value=0.0001 Score=79.68 Aligned_cols=49 Identities=12% Similarity=0.144 Sum_probs=37.4
Q ss_pred CeEEEEcCCCCChhhhhhcCeeE---EecCCcchhhhhccccccccchhhHHH
Q 001017 851 STTLAIGDGANDVGMLQEADIGV---GISGVEGMQAVMSSDIAIAQFRFLERL 900 (1189)
Q Consensus 851 ~~vl~iGDG~ND~~ml~~A~vGI---~i~g~~~~~a~~~sD~~i~~f~~l~~l 900 (1189)
+.+++|||+.||+.|.+.|++.+ +..+. ....+..||+++.++.-+...
T Consensus 191 ~~~i~iGD~~~Di~~a~~aG~~~i~v~~~~~-~~~~~~~ad~v~~sl~el~~~ 242 (250)
T 3l5k_A 191 EKCLVFEDAPNGVEAALAAGMQVVMVPDGNL-SRDLTTKATLVLNSLQDFQPE 242 (250)
T ss_dssp GGEEEEESSHHHHHHHHHTTCEEEECCCTTS-CGGGSTTSSEECSCGGGCCGG
T ss_pred ceEEEEeCCHHHHHHHHHcCCEEEEEcCCCC-chhhcccccEeecCHHHhhHH
Confidence 78999999999999999999654 33322 233678899999987766544
No 101
>2hi0_A Putative phosphoglycolate phosphatase; YP_619066.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.51A {Lactobacillus delbrueckii}
Probab=97.20 E-value=0.00045 Score=74.17 Aligned_cols=40 Identities=20% Similarity=0.156 Sum_probs=35.2
Q ss_pred cCCCCcHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCc
Q 001017 700 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSL 739 (1189)
Q Consensus 700 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi 739 (1189)
++.+|+.++++.|++.|+++.++|+.....+..+-..+|+
T Consensus 110 ~~~~g~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l 149 (240)
T 2hi0_A 110 GPFPGILDLMKNLRQKGVKLAVVSNKPNEAVQVLVEELFP 149 (240)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHST
T ss_pred CcCCCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCC
Confidence 4679999999999999999999999988878777777776
No 102
>2wm8_A MDP-1, magnesium-dependent phosphatase 1; haloacid dehalogenase, protein phosphatase, hydrolase, magne metal-binding; 1.75A {Homo sapiens} PDB: 1u7o_A 1u7p_A
Probab=97.14 E-value=0.00061 Score=70.09 Aligned_cols=41 Identities=22% Similarity=0.259 Sum_probs=37.5
Q ss_pred cCCCCcHHHHHHHHHcCCeEEEEcCCC-hhhHHHHHHHcCcc
Q 001017 700 KLQNGVPECIDKLAQAGIKLWVLTGDK-METAINIGFACSLL 740 (1189)
Q Consensus 700 ~lr~~v~~~I~~L~~aGIkv~mlTGD~-~~ta~~ia~~~gi~ 740 (1189)
++.+++.++|+.|++.|+++.++||.. ...+..+.+.+|+.
T Consensus 68 ~~~~g~~e~L~~L~~~G~~v~ivT~~~~~~~~~~~l~~~gl~ 109 (187)
T 2wm8_A 68 RLYPEVPEVLKRLQSLGVPGAAASRTSEIEGANQLLELFDLF 109 (187)
T ss_dssp CCCTTHHHHHHHHHHHTCCEEEEECCSCHHHHHHHHHHTTCT
T ss_pred CcchhHHHHHHHHHHCCceEEEEeCCCChHHHHHHHHHcCcH
Confidence 578999999999999999999999998 68899898888874
No 103
>3gyg_A NTD biosynthesis operon putative hydrolase NTDB; PF05116, PF08282, MCSG, PSI-2, haloacid dehalogenase-like HY structural genomics; 2.45A {Bacillus subtilis subsp}
Probab=97.14 E-value=0.002 Score=71.19 Aligned_cols=65 Identities=22% Similarity=0.220 Sum_probs=49.3
Q ss_pred EEeCCc--ccHHHHHHHHHhcCC---CeEEEEcCCCCChhhhhhcCeeEEecCCcchhhhhccccccccch
Q 001017 830 CCRSSP--KQKALVTRLVKTKTS---STTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQFR 895 (1189)
Q Consensus 830 ~~r~sP--~qK~~iV~~l~~~~~---~~vl~iGDG~ND~~ml~~A~vGI~i~g~~~~~a~~~sD~~i~~f~ 895 (1189)
+....| ..|...++.+.+..| ..++++||+.||++|++.|++|+++.+.. ...+..||+++.+..
T Consensus 202 ~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~GDs~~D~~~~~~ag~~~~~~~~~-~~~~~~a~~v~~~~~ 271 (289)
T 3gyg_A 202 DVDFIPIGTGKNEIVTFMLEKYNLNTERAIAFGDSGNDVRMLQTVGNGYLLKNAT-QEAKNLHNLITDSEY 271 (289)
T ss_dssp EEEEEESCCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHTTSSEEEECTTCC-HHHHHHCCCBCSSCH
T ss_pred EEEEEeCCCCHHHHHHHHHHHcCCChhhEEEEcCCHHHHHHHHhCCcEEEECCcc-HHHHHhCCEEcCCCC
Confidence 344444 368888887766433 57999999999999999999999996543 347788999887643
No 104
>1qq5_A Protein (L-2-haloacid dehalogenase); hydrolase; 1.52A {Xanthobacter autotrophicus} SCOP: c.108.1.1 PDB: 1qq6_A* 1qq7_A* 1aq6_A
Probab=97.04 E-value=0.00069 Score=73.30 Aligned_cols=39 Identities=15% Similarity=0.199 Sum_probs=35.5
Q ss_pred cCCCCcHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcc
Q 001017 700 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLL 740 (1189)
Q Consensus 700 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~ 740 (1189)
++.+++.++++.|+ |+++.++|+.....+..+...+|+.
T Consensus 93 ~~~~~~~~~l~~l~--g~~~~i~t~~~~~~~~~~l~~~gl~ 131 (253)
T 1qq5_A 93 TPYPDAAQCLAELA--PLKRAILSNGAPDMLQALVANAGLT 131 (253)
T ss_dssp CBCTTHHHHHHHHT--TSEEEEEESSCHHHHHHHHHHTTCG
T ss_pred CCCccHHHHHHHHc--CCCEEEEeCcCHHHHHHHHHHCCch
Confidence 67899999999999 9999999999999888888888874
No 105
>3umg_A Haloacid dehalogenase; defluorinase, hydrolase; 2.25A {Rhodococcus jostii}
Probab=97.03 E-value=0.00076 Score=72.50 Aligned_cols=121 Identities=9% Similarity=0.016 Sum_probs=82.4
Q ss_pred cCCCCcHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcccCCceEEEEeCCCCcccccchhhHHHHHHHHHHHhHHHH
Q 001017 700 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQ 779 (1189)
Q Consensus 700 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 779 (1189)
++.+++.++++.|++. +++.++|+.....+..+...+|+.- +.
T Consensus 116 ~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~~~f--------~~---------------------------- 158 (254)
T 3umg_A 116 TPWPDSVPGLTAIKAE-YIIGPLSNGNTSLLLDMAKNAGIPW--------DV---------------------------- 158 (254)
T ss_dssp CBCTTHHHHHHHHHHH-SEEEECSSSCHHHHHHHHHHHTCCC--------SC----------------------------
T ss_pred cCCcCHHHHHHHHHhC-CeEEEEeCCCHHHHHHHHHhCCCCe--------eE----------------------------
Confidence 5679999999999997 9999999999888888888888630 00
Q ss_pred HhhhhhccccCCCCCCCeEEEEcCchhhhhhhHHHHHHHHHHHhccceeEEEeCCcccHHHHHHHHHhcC---CCeEEEE
Q 001017 780 LIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKT---SSTTLAI 856 (1189)
Q Consensus 780 ~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~~~~~~~~vv~~r~sP~qK~~iV~~l~~~~---~~~vl~i 856 (1189)
++.+. .+....| |..+++.+.+.. .+.+++|
T Consensus 159 --------------------~~~~~------------------------~~~~~kp--~~~~~~~~~~~lgi~~~~~~~i 192 (254)
T 3umg_A 159 --------------------IIGSD------------------------INRKYKP--DPQAYLRTAQVLGLHPGEVMLA 192 (254)
T ss_dssp --------------------CCCHH------------------------HHTCCTT--SHHHHHHHHHHTTCCGGGEEEE
T ss_pred --------------------EEEcC------------------------cCCCCCC--CHHHHHHHHHHcCCChHHEEEE
Confidence 00000 0000112 233333333323 3789999
Q ss_pred cCCCCChhhhhhcCeeEEecCCcc---h------hhhhccccccccchhhHHHHHH
Q 001017 857 GDGANDVGMLQEADIGVGISGVEG---M------QAVMSSDIAIAQFRFLERLLLV 903 (1189)
Q Consensus 857 GDG~ND~~ml~~A~vGI~i~g~~~---~------~a~~~sD~~i~~f~~l~~lll~ 903 (1189)
||+.||+.|.+.|++++++-.... . .....+|+++.++.-|..+|..
T Consensus 193 GD~~~Di~~a~~aG~~~~~~~~~~~~g~~~~~~~~~~~~~d~~~~~~~el~~~l~~ 248 (254)
T 3umg_A 193 AAHNGDLEAAHATGLATAFILRPVEHGPHQTDDLAPTGSWDISATDITDLAAQLRA 248 (254)
T ss_dssp ESCHHHHHHHHHTTCEEEEECCTTTTCTTCCSCSSCSSCCSEEESSHHHHHHHHHH
T ss_pred eCChHhHHHHHHCCCEEEEEecCCcCCCCccccccccCCCceEECCHHHHHHHhcC
Confidence 999999999999999998754211 0 0256789999998888877533
No 106
>2fdr_A Conserved hypothetical protein; SAD, structural genomics, agrobacter tumefaciens, HAD-superfamily hydrolase; 2.00A {Agrobacterium tumefaciens str} SCOP: c.108.1.6
Probab=97.02 E-value=0.00076 Score=71.32 Aligned_cols=52 Identities=12% Similarity=0.269 Sum_probs=39.1
Q ss_pred CCCeEEEEcCCCCChhhhhhcCee-EEecCCcc------hhhhhc-cccccccchhhHHH
Q 001017 849 TSSTTLAIGDGANDVGMLQEADIG-VGISGVEG------MQAVMS-SDIAIAQFRFLERL 900 (1189)
Q Consensus 849 ~~~~vl~iGDG~ND~~ml~~A~vG-I~i~g~~~------~~a~~~-sD~~i~~f~~l~~l 900 (1189)
....+++|||+.||+.|++.|+++ |++..... ...+.. +|+++.+..-+..+
T Consensus 159 ~~~~~i~iGD~~~Di~~a~~aG~~~i~~~~~~~~~~~~~~~l~~~~ad~v~~~~~el~~~ 218 (229)
T 2fdr_A 159 SPDRVVVVEDSVHGIHGARAAGMRVIGFTGASHTYPSHADRLTDAGAETVISRMQDLPAV 218 (229)
T ss_dssp CGGGEEEEESSHHHHHHHHHTTCEEEEECCSTTCCTTHHHHHHHHTCSEEESCGGGHHHH
T ss_pred ChhHeEEEcCCHHHHHHHHHCCCEEEEEecCCccchhhhHHHhhcCCceeecCHHHHHHH
Confidence 346899999999999999999998 66654322 113445 89999887776665
No 107
>2gmw_A D,D-heptose 1,7-bisphosphate phosphatase; Zn-binding protein, hydrolase; 1.50A {Escherichia coli} SCOP: c.108.1.19 PDB: 3esq_A 3esr_A 3l1u_A 3l1v_A 3l8e_A 3l8f_A 3l8g_A*
Probab=97.01 E-value=0.00076 Score=70.89 Aligned_cols=52 Identities=19% Similarity=0.247 Sum_probs=37.2
Q ss_pred CCCeEEEEcCCCCChhhhhhcCee--EEec-CCcc-hhhhhccccccccchhhHHH
Q 001017 849 TSSTTLAIGDGANDVGMLQEADIG--VGIS-GVEG-MQAVMSSDIAIAQFRFLERL 900 (1189)
Q Consensus 849 ~~~~vl~iGDG~ND~~ml~~A~vG--I~i~-g~~~-~~a~~~sD~~i~~f~~l~~l 900 (1189)
..+.++||||+.||+.|.++|++. |++. |... ......+|+++.++.-+..+
T Consensus 147 ~~~~~~~VGD~~~Di~~a~~aG~~~~i~v~~g~~~~~~~~~~~d~vi~~l~el~~~ 202 (211)
T 2gmw_A 147 DMAASYMVGDKLEDMQAAVAANVGTKVLVRTGKPITPEAENAADWVLNSLADLPQA 202 (211)
T ss_dssp CGGGCEEEESSHHHHHHHHHTTCSEEEEESSSSCCCHHHHHHCSEEESCGGGHHHH
T ss_pred CHHHEEEEcCCHHHHHHHHHCCCceEEEEecCCCccccccCCCCEEeCCHHHHHHH
Confidence 346799999999999999999974 5553 2211 11234589999888777666
No 108
>3k1z_A Haloacid dehalogenase-like hydrolase domain-conta protein 3; HDHD3, haloacid dehalogenase-like hydrolase domain containin structural genomics; 1.55A {Homo sapiens}
Probab=96.98 E-value=0.00071 Score=73.75 Aligned_cols=124 Identities=11% Similarity=0.071 Sum_probs=79.6
Q ss_pred cCCCCcHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcccCCceEEEEeCCCCcccccchhhHHHHHHHHHHHhHHHH
Q 001017 700 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQ 779 (1189)
Q Consensus 700 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 779 (1189)
++.+++.++++.|++.|+++.++|+... .+..+...+|+...-..
T Consensus 106 ~~~~~~~~~l~~l~~~g~~~~i~tn~~~-~~~~~l~~~gl~~~f~~---------------------------------- 150 (263)
T 3k1z_A 106 QVLDGAEDTLRECRTRGLRLAVISNFDR-RLEGILGGLGLREHFDF---------------------------------- 150 (263)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEEESCCT-THHHHHHHTTCGGGCSC----------------------------------
T ss_pred eECcCHHHHHHHHHhCCCcEEEEeCCcH-HHHHHHHhCCcHHhhhE----------------------------------
Confidence 4779999999999999999999999665 45777777887431110
Q ss_pred HhhhhhccccCCCCCCCeEEEEcCchhhhhhhHHHHHHHHHHHhccceeEEEeCCcccHHHHHHHHHhcCCCeEEEEcCC
Q 001017 780 LIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDG 859 (1189)
Q Consensus 780 ~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~~~~~~~~vv~~r~sP~qK~~iV~~l~~~~~~~vl~iGDG 859 (1189)
++.+... -...-.|.--..+.+.+.- ....+++|||+
T Consensus 151 --------------------~~~~~~~----------------------~~~Kp~~~~~~~~~~~~g~-~~~~~~~vGD~ 187 (263)
T 3k1z_A 151 --------------------VLTSEAA----------------------GWPKPDPRIFQEALRLAHM-EPVVAAHVGDN 187 (263)
T ss_dssp --------------------EEEHHHH----------------------SSCTTSHHHHHHHHHHHTC-CGGGEEEEESC
T ss_pred --------------------EEeeccc----------------------CCCCCCHHHHHHHHHHcCC-CHHHEEEECCC
Confidence 1110000 0000111112223333322 44789999999
Q ss_pred C-CChhhhhhcCeeEEecCCcch--h---hhhccccccccchhhHHHH
Q 001017 860 A-NDVGMLQEADIGVGISGVEGM--Q---AVMSSDIAIAQFRFLERLL 901 (1189)
Q Consensus 860 ~-ND~~ml~~A~vGI~i~g~~~~--~---a~~~sD~~i~~f~~l~~ll 901 (1189)
. ||+.|.++|++++.+...... . ....+|+++.++.-|..+|
T Consensus 188 ~~~Di~~a~~aG~~~i~~~~~~~~~~~~~~~~~ad~v~~~l~el~~~l 235 (263)
T 3k1z_A 188 YLCDYQGPRAVGMHSFLVVGPQALDPVVRDSVPKEHILPSLAHLLPAL 235 (263)
T ss_dssp HHHHTHHHHTTTCEEEEECCSSCCCHHHHHHSCGGGEESSGGGHHHHH
T ss_pred cHHHHHHHHHCCCEEEEEcCCCCCchhhcccCCCceEeCCHHHHHHHH
Confidence 7 999999999999877443321 0 1236899999988887774
No 109
>3umc_A Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeruginosa}
Probab=96.94 E-value=0.00065 Score=73.23 Aligned_cols=119 Identities=11% Similarity=0.036 Sum_probs=80.4
Q ss_pred cCCCCcHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcccCCceEEEEeCCCCcccccchhhHHHHHHHHHHHhHHHH
Q 001017 700 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQ 779 (1189)
Q Consensus 700 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 779 (1189)
++.+++.++++.|++. +++.++|+.....+..+...+|+. -..
T Consensus 120 ~~~~~~~~~l~~l~~~-~~~~i~s~~~~~~~~~~l~~~g~~---f~~--------------------------------- 162 (254)
T 3umc_A 120 RPWPDTLAGMHALKAD-YWLAALSNGNTALMLDVARHAGLP---WDM--------------------------------- 162 (254)
T ss_dssp EECTTHHHHHHHHTTT-SEEEECCSSCHHHHHHHHHHHTCC---CSE---------------------------------
T ss_pred CCCccHHHHHHHHHhc-CeEEEEeCCCHHHHHHHHHHcCCC---cce---------------------------------
Confidence 5679999999999986 999999999888888888888763 000
Q ss_pred HhhhhhccccCCCCCCCeEEEEcCchhhhhhhHHHHHHHHHHHhccceeEEEeCCcccHHHHHHHHHhc---CCCeEEEE
Q 001017 780 LIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTK---TSSTTLAI 856 (1189)
Q Consensus 780 ~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~~~~~~~~vv~~r~sP~qK~~iV~~l~~~---~~~~vl~i 856 (1189)
++.++.. -...-|..+++.+.+. ..+.+++|
T Consensus 163 --------------------~~~~~~~--------------------------~~~kp~~~~~~~~~~~lgi~~~~~~~i 196 (254)
T 3umc_A 163 --------------------LLCADLF--------------------------GHYKPDPQVYLGACRLLDLPPQEVMLC 196 (254)
T ss_dssp --------------------ECCHHHH--------------------------TCCTTSHHHHHHHHHHHTCCGGGEEEE
T ss_pred --------------------EEeeccc--------------------------ccCCCCHHHHHHHHHHcCCChHHEEEE
Confidence 0000000 0112233333333322 34789999
Q ss_pred cCCCCChhhhhhcCeeEEecCC---cch----h--hhhccccccccchhhHHHH
Q 001017 857 GDGANDVGMLQEADIGVGISGV---EGM----Q--AVMSSDIAIAQFRFLERLL 901 (1189)
Q Consensus 857 GDG~ND~~ml~~A~vGI~i~g~---~~~----~--a~~~sD~~i~~f~~l~~ll 901 (1189)
||+.||+.|.+.|++++++... .+. . .+..+|+++.++.-|..+|
T Consensus 197 GD~~~Di~~a~~aG~~~~~~~~~~~~g~~~~~~l~~~~~ad~v~~~l~el~~~l 250 (254)
T 3umc_A 197 AAHNYDLKAARALGLKTAFIARPLEYGPGQSQDLAAEQDWDLIASDLLDLHRQL 250 (254)
T ss_dssp ESCHHHHHHHHHTTCEEEEECCTTTTCTTCCSSSSCSSCCSEEESSHHHHHHHH
T ss_pred cCchHhHHHHHHCCCeEEEEecCCccCCCCCcccccCCCCcEEECCHHHHHHHh
Confidence 9999999999999999987541 111 1 2567899999988877763
No 110
>2pke_A Haloacid delahogenase-like family hydrolase; NP_639141.1, ST genomics, joint center for structural genomics, JCSG; 1.81A {Xanthomonas campestris PV}
Probab=96.91 E-value=0.0031 Score=67.87 Aligned_cols=40 Identities=18% Similarity=0.143 Sum_probs=34.4
Q ss_pred cCCCCcHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcc
Q 001017 700 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLL 740 (1189)
Q Consensus 700 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~ 740 (1189)
++.+++.++++.|+ .|+++.++|+.....+......+|+.
T Consensus 112 ~~~~~~~~~l~~l~-~~~~~~i~t~~~~~~~~~~l~~~~l~ 151 (251)
T 2pke_A 112 EVIAGVREAVAAIA-ADYAVVLITKGDLFHQEQKIEQSGLS 151 (251)
T ss_dssp CBCTTHHHHHHHHH-TTSEEEEEEESCHHHHHHHHHHHSGG
T ss_pred CcCccHHHHHHHHH-CCCEEEEEeCCCHHHHHHHHHHcCcH
Confidence 56899999999999 99999999999888777777777763
No 111
>3smv_A S-(-)-azetidine-2-carboxylate hydrolase; haloacid dehalogenase superfamily, L-azetidine-2- carboxylate; HET: GOL; 1.38A {Pseudomonas}
Probab=96.91 E-value=0.00081 Score=71.50 Aligned_cols=53 Identities=8% Similarity=-0.049 Sum_probs=40.5
Q ss_pred CCCeEEEEcCCC-CChhhhhhcCeeEEecCCc----------chhhhhccccccccchhhHHHH
Q 001017 849 TSSTTLAIGDGA-NDVGMLQEADIGVGISGVE----------GMQAVMSSDIAIAQFRFLERLL 901 (1189)
Q Consensus 849 ~~~~vl~iGDG~-ND~~ml~~A~vGI~i~g~~----------~~~a~~~sD~~i~~f~~l~~ll 901 (1189)
....+++|||+. ||+.|.++|++++.+-... .......+|+++.++.-+..+|
T Consensus 171 ~~~~~~~vGD~~~~Di~~a~~aG~~~~~~~~~~~~~g~g~~~~~~~~~~ad~v~~~~~el~~~l 234 (240)
T 3smv_A 171 EKKDILHTAESLYHDHIPANDAGLVSAWIYRRHGKEGYGATHVPSRMPNVDFRFNSMGEMAEAH 234 (240)
T ss_dssp CGGGEEEEESCTTTTHHHHHHHTCEEEEECTTCC-------CCCSSCCCCSEEESSHHHHHHHH
T ss_pred CchhEEEECCCchhhhHHHHHcCCeEEEEcCCCcccCCCCCCCCcCCCCCCEEeCCHHHHHHHH
Confidence 347899999996 9999999999999874322 1223478999999887776663
No 112
>2w43_A Hypothetical 2-haloalkanoic acid dehalogenase; hydrolase, metabolic process; HET: MES; 1.66A {Sulfolobus tokodaii} PDB: 2w11_A
Probab=96.88 E-value=0.0009 Score=69.40 Aligned_cols=40 Identities=10% Similarity=0.113 Sum_probs=35.5
Q ss_pred ccCCCCcHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcc
Q 001017 699 DKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLL 740 (1189)
Q Consensus 699 D~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~ 740 (1189)
-++.+|+.+ ++.|++. +++.++|+.....+..+...+|+.
T Consensus 73 ~~~~~~~~~-l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~l~ 112 (201)
T 2w43_A 73 LKAYEDTKY-LKEISEI-AEVYALSNGSINEVKQHLERNGLL 112 (201)
T ss_dssp CEECGGGGG-HHHHHHH-SEEEEEESSCHHHHHHHHHHTTCG
T ss_pred cccCCChHH-HHHHHhC-CeEEEEeCcCHHHHHHHHHHCCcH
Confidence 357799999 9999999 999999999988888888888874
No 113
>2kmv_A Copper-transporting ATPase 1; menkes, nucleotide binding protein, alternative splicing, ATP-binding, cell membrane, cytoplasm, disease mutation; NMR {Homo sapiens} PDB: 2kmx_A*
Probab=96.88 E-value=0.0043 Score=63.17 Aligned_cols=53 Identities=19% Similarity=0.275 Sum_probs=36.4
Q ss_pred EEEecCchHHHHHhhhcchhhHHHHHHHHHHHHhccCeEEEEEEEecCHHHHHHHHHHHHHHhhhhhhcHHHHHHHHHHH
Q 001017 605 LLSKGADSVMFERLAENGREFEEQTKEHINEYADAGLRTLILAYRELDEKEYKQFNEEFTEAKNSVSADREELAEEIAEK 684 (1189)
Q Consensus 605 l~~KGa~~~i~~~~~~~~~~~~~~~~~~l~~~a~~Glr~l~~a~r~l~~~e~~~~~~~~~~a~~~~~~~~~~~~~~~~~~ 684 (1189)
.+.-|..+.|.+. +-...+.....+.++..+|..++.+|
T Consensus 133 ~v~iGn~~~m~~~----gi~i~~~~~~~~~~~~~~G~T~V~va------------------------------------- 171 (185)
T 2kmv_A 133 KVLIGNREWMIRN----GLVINNDVNDFMTEHERKGRTAVLVA------------------------------------- 171 (185)
T ss_dssp EEEEECHHHHHHH----TCCCCHHHHHHHHHHHHTTCEEEEEE-------------------------------------
T ss_pred EEEECCHHHHHHc----CCCCCHHHHHHHHHHHhCCCeEEEEE-------------------------------------
Confidence 4445887766432 11222344556777888999999988
Q ss_pred HhcCceEEEeeeeccc
Q 001017 685 IEKNLILLGATAVEDK 700 (1189)
Q Consensus 685 ie~~l~llG~~~ieD~ 700 (1189)
.|-+++|++++.|+
T Consensus 172 --idg~l~g~iavaD~ 185 (185)
T 2kmv_A 172 --VDDELCGLIAIADT 185 (185)
T ss_dssp --ETTEEEEEEEEECC
T ss_pred --ECCEEEEEEEEEcC
Confidence 56679999999995
No 114
>2fi1_A Hydrolase, haloacid dehalogenase-like family; structural genomics, haloacid dehalogenase-like F PSI, protein structure initiative; 1.40A {Streptococcus pneumoniae} SCOP: c.108.1.3
Probab=96.84 E-value=0.001 Score=68.16 Aligned_cols=38 Identities=16% Similarity=0.314 Sum_probs=31.9
Q ss_pred CCCCcHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCc
Q 001017 701 LQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSL 739 (1189)
Q Consensus 701 lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi 739 (1189)
+.+++.++++.|++.|++++++|+... .+..+...+|+
T Consensus 83 ~~~~~~~~l~~l~~~g~~~~i~t~~~~-~~~~~l~~~~~ 120 (190)
T 2fi1_A 83 LFEGVSDLLEDISNQGGRHFLVSHRND-QVLEILEKTSI 120 (190)
T ss_dssp BCTTHHHHHHHHHHTTCEEEEECSSCT-HHHHHHHHTTC
T ss_pred cCcCHHHHHHHHHHCCCcEEEEECCcH-HHHHHHHHcCC
Confidence 679999999999999999999998764 45666666666
No 115
>2qlt_A (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, saccharom cerevisiae, structural genomics, PSI-2, protein structure initiative; 1.60A {Saccharomyces cerevisiae}
Probab=96.83 E-value=0.0009 Score=73.50 Aligned_cols=40 Identities=15% Similarity=-0.070 Sum_probs=35.3
Q ss_pred cCCCCcHHHHHHHHHc-CCeEEEEcCCChhhHHHHHHHcCc
Q 001017 700 KLQNGVPECIDKLAQA-GIKLWVLTGDKMETAINIGFACSL 739 (1189)
Q Consensus 700 ~lr~~v~~~I~~L~~a-GIkv~mlTGD~~~ta~~ia~~~gi 739 (1189)
.+.+++.++++.|++. |+++.++|+.....+..+....|+
T Consensus 114 ~~~~g~~~~L~~l~~~~g~~l~i~T~~~~~~~~~~l~~~~l 154 (275)
T 2qlt_A 114 IEVPGAVKLCNALNALPKEKWAVATSGTRDMAKKWFDILKI 154 (275)
T ss_dssp EECTTHHHHHHHHHTSCGGGEEEECSSCHHHHHHHHHHHTC
T ss_pred CcCcCHHHHHHHHHhccCCeEEEEeCCCHHHHHHHHHHcCC
Confidence 4579999999999999 999999999998888877777776
No 116
>3ib6_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.20A {Listeria monocytogenes}
Probab=96.73 E-value=0.0053 Score=63.09 Aligned_cols=41 Identities=20% Similarity=0.288 Sum_probs=37.0
Q ss_pred cCCCCcHHHHHHHHHcCCeEEEEcCCCh---hhHHHHHHHcCcc
Q 001017 700 KLQNGVPECIDKLAQAGIKLWVLTGDKM---ETAINIGFACSLL 740 (1189)
Q Consensus 700 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~---~ta~~ia~~~gi~ 740 (1189)
++.+|+.++++.|+++|+++.++|+... ..+..+...+|+.
T Consensus 34 ~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~~~~l~~~gl~ 77 (189)
T 3ib6_A 34 VLRKNAKETLEKVKQLGFKQAILSNTATSDTEVIKRVLTNFGII 77 (189)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHTTCG
T ss_pred eeCcCHHHHHHHHHHCCCEEEEEECCCccchHHHHHHHHhcCch
Confidence 6889999999999999999999998876 7888888888874
No 117
>2o2x_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; 1.50A {Mesorhizobium loti} SCOP: c.108.1.19
Probab=96.57 E-value=0.0016 Score=68.66 Aligned_cols=52 Identities=12% Similarity=0.041 Sum_probs=35.8
Q ss_pred CCeEEEEcCCCCChhhhhhcCeeE--Eec-CCcc-hhhhhccccccccchhhHHHH
Q 001017 850 SSTTLAIGDGANDVGMLQEADIGV--GIS-GVEG-MQAVMSSDIAIAQFRFLERLL 901 (1189)
Q Consensus 850 ~~~vl~iGDG~ND~~ml~~A~vGI--~i~-g~~~-~~a~~~sD~~i~~f~~l~~ll 901 (1189)
.+.++||||+.||+.|.+.|++.. .+. |... ......+|+++.++.-+..++
T Consensus 154 ~~~~~~VGD~~~Di~~a~~aG~~~~i~v~~g~~~~~~~~~~~~~~i~~l~el~~~l 209 (218)
T 2o2x_A 154 LQRSLIVGDKLADMQAGKRAGLAQGWLVDGEAAVQPGFAIRPLRDSSELGDLLAAI 209 (218)
T ss_dssp GGGCEEEESSHHHHHHHHHTTCSEEEEETCCCEEETTEEEEEESSHHHHHHHHHHH
T ss_pred HHHEEEEeCCHHHHHHHHHCCCCEeEEEecCCCCcccccCCCCEecccHHHHHHHH
Confidence 467999999999999999999864 442 2211 112245788887777666653
No 118
>3pdw_A Uncharacterized hydrolase YUTF; structural genomics, PSI2, NYSGXRC, protein structure initia YORK SGX research center for structural genomics; 1.60A {Bacillus subtilis} SCOP: c.108.1.0
Probab=96.38 E-value=0.019 Score=62.33 Aligned_cols=42 Identities=10% Similarity=0.098 Sum_probs=33.8
Q ss_pred ccCCCCcHHHHHHHHHcCCeEEEEcC---CChhhHHHHHHHcCcc
Q 001017 699 DKLQNGVPECIDKLAQAGIKLWVLTG---DKMETAINIGFACSLL 740 (1189)
Q Consensus 699 D~lr~~v~~~I~~L~~aGIkv~mlTG---D~~~ta~~ia~~~gi~ 740 (1189)
+++-+++.++|++|+++|++++++|| +..........++|+.
T Consensus 21 ~~~~~~~~~ai~~l~~~Gi~v~laTgrs~r~~~~~~~~l~~lg~~ 65 (266)
T 3pdw_A 21 TEKIEEACEFVRTLKDRGVPYLFVTNNSSRTPKQVADKLVSFDIP 65 (266)
T ss_dssp HHHHHHHHHHHHHHHHTTCCEEEEESCCSSCHHHHHHHHHHTTCC
T ss_pred CEeCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCC
Confidence 33446789999999999999999998 5666666777788874
No 119
>2x4d_A HLHPP, phospholysine phosphohistidine inorganic pyrophos phosphatase; hydrolase; 1.92A {Homo sapiens}
Probab=96.37 E-value=0.078 Score=57.12 Aligned_cols=40 Identities=13% Similarity=0.091 Sum_probs=35.1
Q ss_pred CCCCcHHHHHHHHHcCCeEEEEc---CCChhhHHHHHHHcCcc
Q 001017 701 LQNGVPECIDKLAQAGIKLWVLT---GDKMETAINIGFACSLL 740 (1189)
Q Consensus 701 lr~~v~~~I~~L~~aGIkv~mlT---GD~~~ta~~ia~~~gi~ 740 (1189)
+-+++.++++.+++.|+++.++| |...........++|+-
T Consensus 33 ~~~~~~~a~~~l~~~G~~~~~~t~~~gr~~~~~~~~l~~~g~~ 75 (271)
T 2x4d_A 33 AIAGSVEAVARLKRSRLKVRFCTNESAASRAELVGQLQRLGFD 75 (271)
T ss_dssp ECTTHHHHHHHHHHSSSEEEEECCCCSSCHHHHHHHHHHTTCC
T ss_pred cCcCHHHHHHHHHHCCCcEEEEECCCCCCHHHHHHHHHHCCCC
Confidence 66888999999999999999999 99888888888887763
No 120
>3cnh_A Hydrolase family protein; NP_295428.1, predicted hydrolase of haloacid dehalogenase-LI superfamily; HET: MSE PG4; 1.66A {Deinococcus radiodurans R1}
Probab=96.23 E-value=0.0019 Score=66.74 Aligned_cols=40 Identities=13% Similarity=0.008 Sum_probs=35.6
Q ss_pred cCCCCcHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcc
Q 001017 700 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLL 740 (1189)
Q Consensus 700 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~ 740 (1189)
++.+++.++++.|++.| +++++|+.....+..+...+|+.
T Consensus 86 ~~~~~~~~~l~~l~~~g-~~~i~s~~~~~~~~~~l~~~~~~ 125 (200)
T 3cnh_A 86 QPRPEVLALARDLGQRY-RMYSLNNEGRDLNEYRIRTFGLG 125 (200)
T ss_dssp CBCHHHHHHHHHHTTTS-EEEEEECCCHHHHHHHHHHHTGG
T ss_pred ccCccHHHHHHHHHHcC-CEEEEeCCcHHHHHHHHHhCCHH
Confidence 36799999999999999 99999999988888888888874
No 121
>3vay_A HAD-superfamily hydrolase; rossmann fold, haloacid dehalogenase; 1.98A {Pseudomonas syringae PV}
Probab=96.04 E-value=0.007 Score=63.82 Aligned_cols=53 Identities=21% Similarity=0.240 Sum_probs=39.5
Q ss_pred CCCeEEEEcCCC-CChhhhhhcCeeEEecCC--cchhhhhccccccccchhhHHHH
Q 001017 849 TSSTTLAIGDGA-NDVGMLQEADIGVGISGV--EGMQAVMSSDIAIAQFRFLERLL 901 (1189)
Q Consensus 849 ~~~~vl~iGDG~-ND~~ml~~A~vGI~i~g~--~~~~a~~~sD~~i~~f~~l~~ll 901 (1189)
....+++|||+. ||+.|.+.|++++.+-.. ........+|+++.++.-|..+|
T Consensus 171 ~~~~~~~vGD~~~~Di~~a~~aG~~~~~v~~~~~~~~~~~~~~~~~~~l~el~~~l 226 (230)
T 3vay_A 171 DASAAVHVGDHPSDDIAGAQQAGMRAIWYNPQGKAWDADRLPDAEIHNLSQLPEVL 226 (230)
T ss_dssp CGGGEEEEESCTTTTHHHHHHTTCEEEEECTTCCCCCSSSCCSEEESSGGGHHHHH
T ss_pred CchheEEEeCChHHHHHHHHHCCCEEEEEcCCCCCCcccCCCCeeECCHHHHHHHH
Confidence 347899999998 999999999998765221 11112557899999988877763
No 122
>2i6x_A Hydrolase, haloacid dehalogenase-like family; HAD superfamily, struct genomics, PSI-2, protein structure initiative; HET: MSE; 2.40A {Porphyromonas gingivalis}
Probab=95.95 E-value=0.0021 Score=67.04 Aligned_cols=36 Identities=14% Similarity=0.096 Sum_probs=30.9
Q ss_pred cCCCCcHHHHHHHHHcCCeEEEEcCCChhhHHHHHHH
Q 001017 700 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFA 736 (1189)
Q Consensus 700 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~ 736 (1189)
++.+++.++++.|++ |++++++|+.....+..+...
T Consensus 89 ~~~~~~~~~l~~l~~-g~~~~i~t~~~~~~~~~~~~~ 124 (211)
T 2i6x_A 89 EISAEKFDYIDSLRP-DYRLFLLSNTNPYVLDLAMSP 124 (211)
T ss_dssp EECHHHHHHHHHHTT-TSEEEEEECCCHHHHHHHTST
T ss_pred ccChHHHHHHHHHHc-CCeEEEEeCCCHHHHHHHHhh
Confidence 467899999999999 999999999887777666655
No 123
>3qgm_A P-nitrophenyl phosphatase (PHO2); structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 2.00A {Archaeoglobus fulgidus} SCOP: c.108.1.0
Probab=95.89 E-value=0.015 Score=63.20 Aligned_cols=43 Identities=14% Similarity=0.031 Sum_probs=35.3
Q ss_pred cccCCCCcHHHHHHHHHcCCeEEEEcC---CChhhHHHHHHHcCcc
Q 001017 698 EDKLQNGVPECIDKLAQAGIKLWVLTG---DKMETAINIGFACSLL 740 (1189)
Q Consensus 698 eD~lr~~v~~~I~~L~~aGIkv~mlTG---D~~~ta~~ia~~~gi~ 740 (1189)
.+++-+++.++|++|+++|++++++|| +...........+|+.
T Consensus 22 ~~~~~~~~~~ai~~l~~~Gi~v~l~Tgr~~r~~~~~~~~l~~lg~~ 67 (268)
T 3qgm_A 22 SVTPIPEGVEGVKKLKELGKKIIFVSNNSTRSRRILLERLRSFGLE 67 (268)
T ss_dssp TTEECHHHHHHHHHHHHTTCEEEEEECCSSSCHHHHHHHHHHTTCC
T ss_pred CCEeCcCHHHHHHHHHHcCCeEEEEeCcCCCCHHHHHHHHHHCCCC
Confidence 455667899999999999999999999 5666666667778874
No 124
>3kbb_A Phosphorylated carbohydrates phosphatase TM_1254; hydrolase, arbohydrate metabolism, COBA magnesium, manganese, metal-binding, nickel; HET: MSE GOL; 1.74A {Thermotoga maritima MSB8}
Probab=95.85 E-value=0.013 Score=61.14 Aligned_cols=42 Identities=24% Similarity=0.192 Sum_probs=38.5
Q ss_pred cCCCCcHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCccc
Q 001017 700 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLR 741 (1189)
Q Consensus 700 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~ 741 (1189)
++.||+.++++.|++.|+++.++|+-....+..+-+.+|+..
T Consensus 84 ~~~pg~~~~l~~L~~~g~~~~i~tn~~~~~~~~~l~~~~l~~ 125 (216)
T 3kbb_A 84 KENPGVREALEFVKSKRIKLALATSTPQREALERLRRLDLEK 125 (216)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGG
T ss_pred ccCccHHHHHHHHHHcCCCcccccCCcHHHHHHHHHhcCCCc
Confidence 467999999999999999999999999999999999999854
No 125
>2gfh_A Haloacid dehalogenase-like hydrolase domain conta; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.90A {Mus musculus} SCOP: c.108.1.6 PDB: 2w4m_A
Probab=95.85 E-value=0.011 Score=64.03 Aligned_cols=40 Identities=23% Similarity=0.290 Sum_probs=35.5
Q ss_pred cCCCCcHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcc
Q 001017 700 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLL 740 (1189)
Q Consensus 700 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~ 740 (1189)
++.||+.++++.|++ ++++.++|+.....+..+...+|+.
T Consensus 121 ~~~~g~~~~L~~L~~-~~~l~i~Tn~~~~~~~~~l~~~gl~ 160 (260)
T 2gfh_A 121 ILADDVKAMLTELRK-EVRLLLLTNGDRQTQREKIEACACQ 160 (260)
T ss_dssp CCCHHHHHHHHHHHT-TSEEEEEECSCHHHHHHHHHHHTCG
T ss_pred CCCcCHHHHHHHHHc-CCcEEEEECcChHHHHHHHHhcCHH
Confidence 577999999999998 5999999999998888888888874
No 126
>2pr7_A Haloacid dehalogenase/epoxide hydrolase family; NP_599989.1, uncharacterized protein, structural genomics; 1.44A {Corynebacterium glutamicum atcc 13032}
Probab=95.74 E-value=0.0015 Score=62.89 Aligned_cols=41 Identities=12% Similarity=0.004 Sum_probs=35.3
Q ss_pred ccCCCCcHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCc
Q 001017 699 DKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSL 739 (1189)
Q Consensus 699 D~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi 739 (1189)
.++.|++.++++.|++.|+++.++|+.....+..+.+.+|+
T Consensus 17 ~~~~~~~~~~l~~L~~~G~~~~i~S~~~~~~~~~~l~~~~l 57 (137)
T 2pr7_A 17 DEDQRRWRNLLAAAKKNGVGTVILSNDPGGLGAAPIRELET 57 (137)
T ss_dssp HHHHHHHHHHHHHHHHTTCEEEEEECSCCGGGGHHHHHHHH
T ss_pred CccCccHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHCCh
Confidence 34678899999999999999999999988887777777766
No 127
>3nvb_A Uncharacterized protein; protein FKBH, protein fkbhstructural genomics, PSI-2, protei structure initiative; 1.71A {Bacteroides fragilis} PDB: 3slr_A
Probab=95.59 E-value=0.0092 Score=67.70 Aligned_cols=34 Identities=21% Similarity=0.119 Sum_probs=32.3
Q ss_pred CCcHHHHHHHHHcCCeEEEEcCCChhhHHHHHHH
Q 001017 703 NGVPECIDKLAQAGIKLWVLTGDKMETAINIGFA 736 (1189)
Q Consensus 703 ~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~ 736 (1189)
+|++++|+.|+++||++.++|+.+...+..+.++
T Consensus 259 pgv~e~L~~Lk~~Gi~laI~Snn~~~~v~~~l~~ 292 (387)
T 3nvb_A 259 TEFQEWVKKLKNRGIIIAVCSKNNEGKAKEPFER 292 (387)
T ss_dssp HHHHHHHHHHHHTTCEEEEEEESCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHhh
Confidence 6799999999999999999999999999999987
No 128
>2oda_A Hypothetical protein pspto_2114; haloacid dehalogenase, phosphonoacetaldehyde hydrolase, protein binding; HET: EPE; 1.90A {Pseudomonas syringae PV}
Probab=95.50 E-value=0.026 Score=58.25 Aligned_cols=35 Identities=11% Similarity=0.167 Sum_probs=30.0
Q ss_pred cCCCCcHHHHHHHHHcCCeEEEEcCCChhhHHHHH
Q 001017 700 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIG 734 (1189)
Q Consensus 700 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia 734 (1189)
++.+|+.++++.|+++|+++.++||.....+..+.
T Consensus 36 ~~~pg~~e~L~~L~~~g~~~~i~T~~~~~~~~~~~ 70 (196)
T 2oda_A 36 QLTPGAQNALKALRDQGMPCAWIDELPEALSTPLA 70 (196)
T ss_dssp SBCTTHHHHHHHHHHHTCCEEEECCSCHHHHHHHH
T ss_pred CcCcCHHHHHHHHHHCCCEEEEEcCChHHHHHHhc
Confidence 57899999999999999999999998877664433
No 129
>1vjr_A 4-nitrophenylphosphatase; TM1742, structural genomics, JCSG, protein structure initiative, joint center for structural G hydrolase; 2.40A {Thermotoga maritima} SCOP: c.108.1.14 PDB: 1pw5_A*
Probab=95.40 E-value=0.085 Score=57.17 Aligned_cols=42 Identities=14% Similarity=0.103 Sum_probs=37.1
Q ss_pred ccCCCCcHHHHHHHHHcCCeEEEEc---CCChhhHHHHHHHcCcc
Q 001017 699 DKLQNGVPECIDKLAQAGIKLWVLT---GDKMETAINIGFACSLL 740 (1189)
Q Consensus 699 D~lr~~v~~~I~~L~~aGIkv~mlT---GD~~~ta~~ia~~~gi~ 740 (1189)
+++-+++.++|+.|++.|++++++| |..........+.+|+.
T Consensus 32 ~~~~~~~~~~l~~l~~~G~~~~~aTn~~gr~~~~~~~~~~~lg~~ 76 (271)
T 1vjr_A 32 DSLLPGSLEFLETLKEKNKRFVFFTNNSSLGAQDYVRKLRNMGVD 76 (271)
T ss_dssp TEECTTHHHHHHHHHHTTCEEEEEESCTTSCHHHHHHHHHHTTCC
T ss_pred CEECcCHHHHHHHHHHcCCeEEEEECCCCCCHHHHHHHHHHcCCC
Confidence 5677899999999999999999999 88888888888888874
No 130
>2b0c_A Putative phosphatase; alpha-D-glucose-1-phosphate, structural genomic protein structure initiative, midwest center for structural genomics, MCSG; HET: G1P; 2.00A {Escherichia coli} SCOP: c.108.1.2
Probab=95.37 E-value=0.0015 Score=67.77 Aligned_cols=31 Identities=23% Similarity=0.284 Sum_probs=26.8
Q ss_pred cCCCCcHHHHHHHHHcCCeEEEEcCCChhhH
Q 001017 700 KLQNGVPECIDKLAQAGIKLWVLTGDKMETA 730 (1189)
Q Consensus 700 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta 730 (1189)
++.+++.++++.|++.|++++++|+.....+
T Consensus 91 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~ 121 (206)
T 2b0c_A 91 ALRPEVIAIMHKLREQGHRVVVLSNTNRLHT 121 (206)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEECCCCCTT
T ss_pred ccCccHHHHHHHHHHCCCeEEEEECCChHHH
Confidence 5679999999999999999999999765443
No 131
>3epr_A Hydrolase, haloacid dehalogenase-like family; structural genomics, unknown function, HAD superfamily hydro PSI-2; 1.55A {Streptococcus agalactiae serogroup V} SCOP: c.108.1.14 PDB: 1ys9_A 1wvi_A 1ydf_A
Probab=95.08 E-value=0.05 Score=58.91 Aligned_cols=41 Identities=15% Similarity=0.207 Sum_probs=35.7
Q ss_pred cCCCCcHHHHHHHHHcCCeEEEEc---CCChhhHHHHHHHcCccc
Q 001017 700 KLQNGVPECIDKLAQAGIKLWVLT---GDKMETAINIGFACSLLR 741 (1189)
Q Consensus 700 ~lr~~v~~~I~~L~~aGIkv~mlT---GD~~~ta~~ia~~~gi~~ 741 (1189)
.+ +++.++|++|+++|++++++| |...........++|+..
T Consensus 22 ~i-~~~~eal~~l~~~G~~vvl~Tn~~gr~~~~~~~~l~~lg~~~ 65 (264)
T 3epr_A 22 RI-PAGERFIERLQEKGIPYMLVTNNTTRTPESVQEMLRGFNVET 65 (264)
T ss_dssp EC-HHHHHHHHHHHHHTCCEEEEECCCSSCHHHHHHHHHTTTCCC
T ss_pred EC-cCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHCCCCC
Confidence 45 899999999999999999999 778888888888888843
No 132
>2c4n_A Protein NAGD; nucleotide phosphatase, HAD superfamily, UMP phosphatase, carbohydrate metabolism, hydrolase; 1.8A {Escherichia coli} SCOP: c.108.1.14
Probab=95.00 E-value=0.075 Score=56.29 Aligned_cols=60 Identities=18% Similarity=0.165 Sum_probs=40.2
Q ss_pred cHHHHHHHHHhcC---CCeEEEEcCC-CCChhhhhhcCeeEEe--cCCcc-hhhh---hccccccccchh
Q 001017 837 QKALVTRLVKTKT---SSTTLAIGDG-ANDVGMLQEADIGVGI--SGVEG-MQAV---MSSDIAIAQFRF 896 (1189)
Q Consensus 837 qK~~iV~~l~~~~---~~~vl~iGDG-~ND~~ml~~A~vGI~i--~g~~~-~~a~---~~sD~~i~~f~~ 896 (1189)
.|...++.+.+.. .+.|+||||+ .||+.|++.|++++++ .|... ...+ ..+|+++.++.-
T Consensus 177 pk~~~~~~~~~~lgi~~~~~i~iGD~~~nDi~~~~~aG~~~~~v~~g~~~~~~~~~~~~~~~~v~~~~~e 246 (250)
T 2c4n_A 177 PSPWIIRAALNKMQAHSEETVIVGDNLRTDILAGFQAGLETILVLSGVSSLDDIDSMPFRPSWIYPSVAE 246 (250)
T ss_dssp TSTHHHHHHHHHHTCCGGGEEEEESCTTTHHHHHHHTTCEEEEESSSSCCGGGGSSCSSCCSEEESSGGG
T ss_pred CCHHHHHHHHHHcCCCcceEEEECCCchhHHHHHHHcCCeEEEECCCCCChhhhhhcCCCCCEEECCHHH
Confidence 3555666555433 3789999999 7999999999999654 23222 1122 368888877554
No 133
>2zg6_A Putative uncharacterized protein ST2620, probable 2-haloalkanoic; probable 2-haloalkanoic acid dehalogenase, hydrolase, structural genomics; 2.40A {Sulfolobus tokodaii}
Probab=95.00 E-value=0.045 Score=57.32 Aligned_cols=40 Identities=18% Similarity=0.136 Sum_probs=34.0
Q ss_pred cCCCCcHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcc
Q 001017 700 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLL 740 (1189)
Q Consensus 700 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~ 740 (1189)
++.+|+.++++.|+++|+++.++|+... .+..+...+|+.
T Consensus 95 ~~~~~~~~~l~~l~~~g~~~~i~Tn~~~-~~~~~l~~~gl~ 134 (220)
T 2zg6_A 95 FLYDDTLEFLEGLKSNGYKLALVSNASP-RVKTLLEKFDLK 134 (220)
T ss_dssp EECTTHHHHHHHHHTTTCEEEECCSCHH-HHHHHHHHHTCG
T ss_pred eECcCHHHHHHHHHHCCCEEEEEeCCcH-HHHHHHHhcCcH
Confidence 5789999999999999999999999866 466777777764
No 134
>3pct_A Class C acid phosphatase; hydrolase, outer membrane; 1.85A {Pasteurella multocida}
Probab=95.00 E-value=0.035 Score=59.43 Aligned_cols=43 Identities=7% Similarity=0.099 Sum_probs=35.9
Q ss_pred cccCCCCcHHHHHHHHHcCCeEEEEcCCChh----hHHHHHHHcCcc
Q 001017 698 EDKLQNGVPECIDKLAQAGIKLWVLTGDKME----TAINIGFACSLL 740 (1189)
Q Consensus 698 eD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~----ta~~ia~~~gi~ 740 (1189)
+.++.||+.++++.|++.|+++.++||.... .+..-.+++||.
T Consensus 99 ~~~~~pg~~ell~~L~~~G~~i~ivTgR~~~~~r~~T~~~L~~lGi~ 145 (260)
T 3pct_A 99 QSAAIPGAVEFSNYVNANGGTMFFVSNRRDDVEKAGTVDDMKRLGFT 145 (260)
T ss_dssp CCEECTTHHHHHHHHHHTTCEEEEEEEEETTTSHHHHHHHHHHHTCC
T ss_pred CCCCCccHHHHHHHHHHCCCeEEEEeCCCccccHHHHHHHHHHcCcC
Confidence 4678999999999999999999999999754 555556677773
No 135
>4as2_A Phosphorylcholine phosphatase; hydrolase, HAD superfamily, alkylammonium compounds; HET: BTB; 2.12A {Pseudomonas aeruginosa} PDB: 4as3_A*
Probab=94.79 E-value=0.028 Score=62.79 Aligned_cols=42 Identities=19% Similarity=0.283 Sum_probs=37.9
Q ss_pred eecccCCCCcHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHc
Q 001017 696 AVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFAC 737 (1189)
Q Consensus 696 ~ieD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~ 737 (1189)
.+...+.++..+.++.|+++|++|||+||-..+.+..+|..+
T Consensus 139 ~~~~~~~~~~~~l~~~l~~~G~~v~ivSas~~~~v~~~a~~~ 180 (327)
T 4as2_A 139 VEPPRVFSGQRELYNKLMENGIEVYVISAAHEELVRMVAADP 180 (327)
T ss_dssp ECCCEECHHHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHTCG
T ss_pred ccccccCHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHhhc
Confidence 344468899999999999999999999999999999999885
No 136
>4gib_A Beta-phosphoglucomutase; rossmann fold, HAD-like, structural genomics, center for structural genomics of infectious DISE csgid, isomerase; 2.27A {Clostridium difficile}
Probab=94.73 E-value=0.03 Score=60.18 Aligned_cols=118 Identities=14% Similarity=0.236 Sum_probs=75.6
Q ss_pred cccCCCCcHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcccCCceEEEEeCCCCcccccchhhHHHHHHHHHHHhHH
Q 001017 698 EDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVL 777 (1189)
Q Consensus 698 eD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 777 (1189)
..++.|++.++++.|++.|+++.+.|+.. .+..+-+.+|+...-..
T Consensus 114 ~~~~~p~~~~ll~~Lk~~g~~i~i~~~~~--~~~~~L~~~gl~~~Fd~-------------------------------- 159 (250)
T 4gib_A 114 SNDILPGIESLLIDVKSNNIKIGLSSASK--NAINVLNHLGISDKFDF-------------------------------- 159 (250)
T ss_dssp GGGSCTTHHHHHHHHHHTTCEEEECCSCT--THHHHHHHHTCGGGCSE--------------------------------
T ss_pred ccccchhHHHHHHHHHhcccccccccccc--hhhhHhhhcccccccce--------------------------------
Confidence 34678999999999999999999877653 45666777787432111
Q ss_pred HHHhhhhhccccCCCCCCCeEEEEcCchhhhhhhHHHHHHHHHHHhccceeEEEeCCcccHHHHHHHHHhcCCCeEEEEc
Q 001017 778 HQLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIG 857 (1189)
Q Consensus 778 ~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~~~~~~~~vv~~r~sP~qK~~iV~~l~~~~~~~vl~iG 857 (1189)
++++.... ...-.|+-=..+.+.+.- ..+.+++||
T Consensus 160 ----------------------i~~~~~~~----------------------~~KP~p~~~~~a~~~lg~-~p~e~l~VG 194 (250)
T 4gib_A 160 ----------------------IADAGKCK----------------------NNKPHPEIFLMSAKGLNV-NPQNCIGIE 194 (250)
T ss_dssp ----------------------ECCGGGCC----------------------SCTTSSHHHHHHHHHHTC-CGGGEEEEE
T ss_pred ----------------------eecccccC----------------------CCCCcHHHHHHHHHHhCC-ChHHeEEEC
Confidence 11111100 001112111223333332 447899999
Q ss_pred CCCCChhhhhhcCe-eEEecCCcchhhhhccccccccchhh
Q 001017 858 DGANDVGMLQEADI-GVGISGVEGMQAVMSSDIAIAQFRFL 897 (1189)
Q Consensus 858 DG~ND~~ml~~A~v-GI~i~g~~~~~a~~~sD~~i~~f~~l 897 (1189)
|..+|+.+-++|++ .|++...+. ...||+++.++.-|
T Consensus 195 Ds~~Di~aA~~aG~~~i~v~~~~~---~~~ad~vi~~l~eL 232 (250)
T 4gib_A 195 DASAGIDAINSANMFSVGVGNYEN---LKKANLVVDSTNQL 232 (250)
T ss_dssp SSHHHHHHHHHTTCEEEEESCTTT---TTTSSEEESSGGGC
T ss_pred CCHHHHHHHHHcCCEEEEECChhH---hccCCEEECChHhC
Confidence 99999999999998 567754443 34689999887665
No 137
>1qyi_A ZR25, hypothetical protein; structural genomics, PSI, protein structure initiative, NORT structural genomics consortium, NESG; 2.50A {Staphylococcus aureus subsp} SCOP: c.108.1.13
Probab=94.64 E-value=0.062 Score=61.37 Aligned_cols=42 Identities=21% Similarity=0.194 Sum_probs=38.0
Q ss_pred cCCCCcHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCccc
Q 001017 700 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLR 741 (1189)
Q Consensus 700 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~ 741 (1189)
++.||+.++++.|+++|+++.++|+.....+..+-...|+..
T Consensus 215 ~l~pGv~elL~~Lk~~Gi~laIvTn~~~~~~~~~L~~lgL~~ 256 (384)
T 1qyi_A 215 RPVDEVKVLLNDLKGAGFELGIATGRPYTETVVPFENLGLLP 256 (384)
T ss_dssp SCHHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCGG
T ss_pred CcCcCHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHcCChH
Confidence 567899999999999999999999999999988888888753
No 138
>2ho4_A Haloacid dehalogenase-like hydrolase domain containing 2; HDHD2, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; 2.20A {Mus musculus} PDB: 3hlt_A
Probab=94.45 E-value=0.32 Score=51.97 Aligned_cols=63 Identities=13% Similarity=0.095 Sum_probs=40.9
Q ss_pred HHHHHHHHHhcCC---CeEEEEcCCC-CChhhhhhcCee-EEec-CCc-chhh---hhccccccccchhhHHH
Q 001017 838 KALVTRLVKTKTS---STTLAIGDGA-NDVGMLQEADIG-VGIS-GVE-GMQA---VMSSDIAIAQFRFLERL 900 (1189)
Q Consensus 838 K~~iV~~l~~~~~---~~vl~iGDG~-ND~~ml~~A~vG-I~i~-g~~-~~~a---~~~sD~~i~~f~~l~~l 900 (1189)
|..+.+.+.+..| +.+++|||+. ||+.|.+.|++. |.+. |.. ..+. ...+|+++.++.-+..+
T Consensus 181 ~~~~~~~~~~~lgi~~~~~~~iGD~~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~~~~~~~~~~l~~l~~~ 253 (259)
T 2ho4_A 181 EKTFFLEALRDADCAPEEAVMIGDDCRDDVDGAQNIGMLGILVKTGKYKAADEEKINPPPYLTCESFPHAVDH 253 (259)
T ss_dssp SHHHHHHHGGGGTCCGGGEEEEESCTTTTHHHHHHTTCEEEEESSTTCCTTGGGGSSSCCSEEESCHHHHHHH
T ss_pred CHHHHHHHHHHcCCChHHEEEECCCcHHHHHHHHHCCCcEEEECCCCCCcccccccCCCCCEEECCHHHHHHH
Confidence 4455555444333 6899999998 999999999985 4553 211 1111 24578888877766655
No 139
>4dcc_A Putative haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 1.65A {Bacteroides thetaiotaomicron} PDB: 4dfd_A 4f71_A 4f72_A
Probab=94.18 E-value=0.015 Score=61.48 Aligned_cols=34 Identities=9% Similarity=0.015 Sum_probs=29.9
Q ss_pred cCCCCcHHHHHHHHHcCCeEEEEcCCChhhHHHHH
Q 001017 700 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIG 734 (1189)
Q Consensus 700 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia 734 (1189)
++.|++.++++.|++. +++.++|+.....+..+.
T Consensus 112 ~~~~~~~~~l~~l~~~-~~~~i~Sn~~~~~~~~~~ 145 (229)
T 4dcc_A 112 DIPTYKLDLLLKLREK-YVVYLLSNTNDIHWKWVC 145 (229)
T ss_dssp CCCHHHHHHHHHHTTT-SEEEEEECCCHHHHHHHH
T ss_pred hccHHHHHHHHHHHhc-CcEEEEECCChHHHHHHH
Confidence 4668999999999999 999999999988877665
No 140
>3ocu_A Lipoprotein E; hydrolase, outer membrane; HET: NMN; 1.35A {Haemophilus influenzae} PDB: 3ocv_A* 3ocw_A* 3ocx_A* 3ocz_A* 3ocy_A* 3sf0_A* 2hlk_A 2hll_A 3et4_A 3et5_A
Probab=94.11 E-value=0.048 Score=58.40 Aligned_cols=43 Identities=14% Similarity=0.063 Sum_probs=35.5
Q ss_pred cccCCCCcHHHHHHHHHcCCeEEEEcCCChh----hHHHHHHHcCcc
Q 001017 698 EDKLQNGVPECIDKLAQAGIKLWVLTGDKME----TAINIGFACSLL 740 (1189)
Q Consensus 698 eD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~----ta~~ia~~~gi~ 740 (1189)
++++.||+.+.++.|++.|+++.++||.... .+..-.++.||.
T Consensus 99 ~~~~~pG~~ell~~L~~~G~ki~ivTgR~~~~~r~~T~~~L~~lGi~ 145 (262)
T 3ocu_A 99 QSRAVPGAVEFNNYVNSHNGKVFYVTNRKDSTEKSGTIDDMKRLGFN 145 (262)
T ss_dssp CCEECTTHHHHHHHHHHTTEEEEEEEEEETTTTHHHHHHHHHHHTCS
T ss_pred CCCCCccHHHHHHHHHHCCCeEEEEeCCCccchHHHHHHHHHHcCcC
Confidence 5778899999999999999999999999753 555555667773
No 141
>2arf_A Wilson disease ATPase; P-type ATPase,ATP7B, copper transport, nucleotide binding, ATP binding, hydrolase; NMR {Homo sapiens} PDB: 2koy_A
Probab=94.04 E-value=0.23 Score=49.36 Aligned_cols=37 Identities=8% Similarity=0.125 Sum_probs=22.3
Q ss_pred EecCchHHHHHhhhcchhhHHHHHHHHHHHHhccCeEEEEE
Q 001017 607 SKGADSVMFERLAENGREFEEQTKEHINEYADAGLRTLILA 647 (1189)
Q Consensus 607 ~KGa~~~i~~~~~~~~~~~~~~~~~~l~~~a~~Glr~l~~a 647 (1189)
.=|....|-+.-- ...+.....+..+..+|..++.+|
T Consensus 116 ~iGn~~~m~~~gi----~~~~~~~~~~~~~~~~G~T~v~va 152 (165)
T 2arf_A 116 LIGNREWLRRNGL----TISSDVSDAMTDHEMKGQTAILVA 152 (165)
T ss_dssp EEECHHHHHHHHC----SSCHHHHHHHHHHHTTTSEEEEEE
T ss_pred EEcCHHHHHhcCC----CCCHHHHHHHHHHHhCCCeEEEEE
Confidence 3388776643211 112234455667788999999888
No 142
>2p11_A Hypothetical protein; putative haloacid dehalogenase-like hydrolase, structural GE joint center for structural genomics, JCSG; 2.20A {Burkholderia xenovorans}
Probab=93.92 E-value=0.11 Score=54.69 Aligned_cols=40 Identities=13% Similarity=0.139 Sum_probs=36.2
Q ss_pred ccCCCCcHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCc
Q 001017 699 DKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSL 739 (1189)
Q Consensus 699 D~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi 739 (1189)
-++.||+.++++.|++.| ++.++|+-....+..+...+|+
T Consensus 95 ~~~~~g~~~~l~~l~~~g-~~~i~Tn~~~~~~~~~l~~~gl 134 (231)
T 2p11_A 95 SRVYPGALNALRHLGARG-PTVILSDGDVVFQPRKIARSGL 134 (231)
T ss_dssp GGBCTTHHHHHHHHHTTS-CEEEEEECCSSHHHHHHHHTTH
T ss_pred CCcCccHHHHHHHHHhCC-CEEEEeCCCHHHHHHHHHHcCc
Confidence 368999999999999999 9999999988888888888886
No 143
>2fpr_A Histidine biosynthesis bifunctional protein HISB; histidinola phosphate phosphatase, bifunctional enzyme structural genomics; 1.70A {Escherichia coli} SCOP: c.108.1.19 PDB: 2fps_A 2fpu_A* 2fpx_A 2fpw_A*
Probab=93.66 E-value=0.026 Score=57.17 Aligned_cols=40 Identities=25% Similarity=0.277 Sum_probs=33.8
Q ss_pred cCCCCcHHHHHHHHHcCCeEEEEcCC---------------ChhhHHHHHHHcCc
Q 001017 700 KLQNGVPECIDKLAQAGIKLWVLTGD---------------KMETAINIGFACSL 739 (1189)
Q Consensus 700 ~lr~~v~~~I~~L~~aGIkv~mlTGD---------------~~~ta~~ia~~~gi 739 (1189)
++.|++.++|+.|++.|+++.++|+- ....+..+....|+
T Consensus 42 ~~~pg~~e~L~~L~~~G~~l~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl 96 (176)
T 2fpr_A 42 AFEPGVIPQLLKLQKAGYKLVMITNQDGLGTQSFPQADFDGPHNLMMQIFTSQGV 96 (176)
T ss_dssp CBCTTHHHHHHHHHHTTEEEEEEEECTTTTBTTBCHHHHHHHHHHHHHHHHHTTC
T ss_pred cCCccHHHHHHHHHHCCCEEEEEECCccccccccchHhhhhhHHHHHHHHHHcCC
Confidence 57899999999999999999999997 35566667777776
No 144
>1ltq_A Polynucleotide kinase; phosphatase, alpha/beta, P-loop, transferase; HET: ADP; 2.33A {Enterobacteria phage T4} SCOP: c.108.1.9 c.37.1.1 PDB: 1rc8_A* 1rpz_A* 1rrc_A* 2ia5_A
Probab=93.33 E-value=0.043 Score=60.78 Aligned_cols=32 Identities=25% Similarity=0.264 Sum_probs=28.6
Q ss_pred cccCCCCcHHHHHHHHHcCCeEEEEcCCChhh
Q 001017 698 EDKLQNGVPECIDKLAQAGIKLWVLTGDKMET 729 (1189)
Q Consensus 698 eD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~t 729 (1189)
++++.+|+.++++.|+++|+++.++||.....
T Consensus 186 ~~~~~~g~~e~L~~L~~~g~~~~v~T~k~~~~ 217 (301)
T 1ltq_A 186 TDVINPMVVELSKMYALMGYQIVVVSGRESGT 217 (301)
T ss_dssp GCCBCHHHHHHHHHHHHTTCEEEEEECSCCCC
T ss_pred ccCCChHHHHHHHHHHHCCCeEEEEeCCCccc
Confidence 56778999999999999999999999998654
No 145
>2i33_A Acid phosphatase; HAD superfamily, hydrolase; 1.57A {Bacillus anthracis} PDB: 2i34_A
Probab=93.14 E-value=0.098 Score=56.38 Aligned_cols=43 Identities=12% Similarity=0.142 Sum_probs=33.5
Q ss_pred cccCCCCcHHHHHHHHHcCCeEEEEcCCChhhH---HHHHHHcCcc
Q 001017 698 EDKLQNGVPECIDKLAQAGIKLWVLTGDKMETA---INIGFACSLL 740 (1189)
Q Consensus 698 eD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta---~~ia~~~gi~ 740 (1189)
+.++-|++.++|+.|++.|+++.++||...... ...-..+|+.
T Consensus 99 ~~~~~pg~~e~L~~L~~~Gi~i~iaTnr~~~~~~~~~~~L~~~Gl~ 144 (258)
T 2i33_A 99 EAEALPGSIDFLKYTESKGVDIYYISNRKTNQLDATIKNLERVGAP 144 (258)
T ss_dssp CCEECTTHHHHHHHHHHTTCEEEEEEEEEGGGHHHHHHHHHHHTCS
T ss_pred CCCcCccHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHHHHHcCCC
Confidence 357789999999999999999999999985433 3334556663
No 146
>2oyc_A PLP phosphatase, pyridoxal phosphate phosphatase; structural genomics, NYSGXRC, NEW YORK SGX research center for structural genomics, PSI-2; 1.72A {Homo sapiens} PDB: 2p27_A 2p69_A* 2cft_A* 2cfs_A 2cfr_A*
Probab=91.95 E-value=0.57 Score=51.70 Aligned_cols=44 Identities=16% Similarity=0.126 Sum_probs=35.0
Q ss_pred ecccCCCCcHHHHHHHHHcCCeEEEEc---CCChhhHHHHHHHcCcc
Q 001017 697 VEDKLQNGVPECIDKLAQAGIKLWVLT---GDKMETAINIGFACSLL 740 (1189)
Q Consensus 697 ieD~lr~~v~~~I~~L~~aGIkv~mlT---GD~~~ta~~ia~~~gi~ 740 (1189)
-.+++-+++.++++.|++.|++++++| |..........+.+|+.
T Consensus 34 ~~~~~~~~~~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~~~~~~g~~ 80 (306)
T 2oyc_A 34 NGERAVPGAPELLERLARAGKAALFVSNNSRRARPELALRFARLGFG 80 (306)
T ss_dssp ETTEECTTHHHHHHHHHHTTCEEEEEECCCSSCHHHHHHHHHHTTCC
T ss_pred cCCccCcCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHhcCCC
Confidence 356677899999999999999999999 46666665666677763
No 147
>1yns_A E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo sapiens} SCOP: c.108.1.22 PDB: 1zs9_A
Probab=91.46 E-value=0.25 Score=53.23 Aligned_cols=38 Identities=16% Similarity=0.230 Sum_probs=33.0
Q ss_pred ccCCCCcHHHHHHHHHcCCeEEEEcCCChhhHHHHHHH
Q 001017 699 DKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFA 736 (1189)
Q Consensus 699 D~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~ 736 (1189)
-++.||+.++++.|+++|+++.++|+-....+..+-..
T Consensus 129 ~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~ 166 (261)
T 1yns_A 129 AEFFADVVPAVRKWREAGMKVYIYSSGSVEAQKLLFGH 166 (261)
T ss_dssp BCCCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHT
T ss_pred cccCcCHHHHHHHHHhCCCeEEEEeCCCHHHHHHHHHh
Confidence 46889999999999999999999999988877766553
No 148
>4g9b_A Beta-PGM, beta-phosphoglucomutase; HAD, putative phosphoglucomutase, enzyme function initiative structural genomics, isomerase; 1.70A {Escherichia coli}
Probab=89.97 E-value=0.28 Score=52.09 Aligned_cols=41 Identities=17% Similarity=0.095 Sum_probs=32.8
Q ss_pred ccCCCCcHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCccc
Q 001017 699 DKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLR 741 (1189)
Q Consensus 699 D~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~ 741 (1189)
.++.||+.++++.|++.|+++.++|+... +..+-..+|+..
T Consensus 94 ~~~~pg~~~ll~~L~~~g~~i~i~t~~~~--~~~~l~~~gl~~ 134 (243)
T 4g9b_A 94 NAVLPGIRSLLADLRAQQISVGLASVSLN--APTILAALELRE 134 (243)
T ss_dssp GGBCTTHHHHHHHHHHTTCEEEECCCCTT--HHHHHHHTTCGG
T ss_pred ccccccHHHHHHhhhcccccceecccccc--hhhhhhhhhhcc
Confidence 46789999999999999999999998643 455566777743
No 149
>4fe3_A Cytosolic 5'-nucleotidase 3; substrate complex, HAD-like, protein binding; HET: U5P; 1.74A {Mus musculus} PDB: 2g09_A* 2bdu_A* 2g08_A 2g06_A* 2g0a_A* 2q4t_A* 2g07_A* 2jga_A 2vkq_A 2cn1_A
Probab=83.86 E-value=0.37 Score=53.04 Aligned_cols=35 Identities=23% Similarity=0.258 Sum_probs=27.3
Q ss_pred ccCCcccccCcchhhhc---------cCeeEEEeCCCccccccce
Q 001017 401 ETDKPARARTSNLNEEL---------GQVDTILSDKTGTLTCNSM 436 (1189)
Q Consensus 401 ~~~~~i~~~~~~~~E~L---------g~v~~i~~DKTGTLT~n~m 436 (1189)
-.+.++++|++..+|++ .++. |+||||||||+...
T Consensus 16 l~k~~v~ikd~~~~e~~i~~~~kgg~~kL~-VV~DfdgTLT~~~~ 59 (297)
T 4fe3_A 16 FQKSSVRIKNPTRVEEIICGLIKGGAAKLQ-IITDFNMTLSRFSY 59 (297)
T ss_dssp GTSTTEECSCHHHHHHHHHHHHHHHHHHEE-EEECCTTTTBCSEE
T ss_pred HhcCCeEEcChHHHHHHHHHHHhCcchhEE-EEEcCCCCceeecc
Confidence 37788999999998873 3444 67799999998653
No 150
>2b82_A APHA, class B acid phosphatase; DDDD acid phosphatase, metallo-ENZ hydrolase; HET: ADN; 1.25A {Escherichia coli} SCOP: c.108.1.12 PDB: 2b8j_A* 2hf7_A 1rmt_A* 1n9k_A 1rmq_A 1n8n_A* 1rmy_A* 2g1a_A* 3cz4_A 2heg_A* 1z5g_A 1z5u_A* 1z88_A 2aut_A
Probab=82.97 E-value=0.49 Score=49.17 Aligned_cols=29 Identities=17% Similarity=0.229 Sum_probs=25.4
Q ss_pred CCCCcHHHHHHHHHcCCeEEEEcCCChhh
Q 001017 701 LQNGVPECIDKLAQAGIKLWVLTGDKMET 729 (1189)
Q Consensus 701 lr~~v~~~I~~L~~aGIkv~mlTGD~~~t 729 (1189)
+.+++.++++.|+++|+++.++||.....
T Consensus 89 ~~~~~~e~l~~L~~~G~~l~ivTn~~~~~ 117 (211)
T 2b82_A 89 PKEVARQLIDMHVRRGDAIFFVTGRSPTK 117 (211)
T ss_dssp ECHHHHHHHHHHHHHTCEEEEEECSCCCS
T ss_pred CcHHHHHHHHHHHHCCCEEEEEcCCcHHH
Confidence 46789999999999999999999987543
No 151
>1yv9_A Hydrolase, haloacid dehalogenase family; hypothetical protein, struc genomics, PSI, protein structure initiative; 2.80A {Enterococcus faecalis} SCOP: c.108.1.14
Probab=81.51 E-value=1.9 Score=46.12 Aligned_cols=42 Identities=5% Similarity=0.147 Sum_probs=34.0
Q ss_pred ccCCCCcHHHHHHHHHcCCeEEEEcCCChhhHHHHHHH----cCcc
Q 001017 699 DKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFA----CSLL 740 (1189)
Q Consensus 699 D~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~----~gi~ 740 (1189)
++.-+++.++++.|++.|+++.++||....+...++.. +|+.
T Consensus 20 ~~~~~~~~~~l~~l~~~g~~~~~~t~~~~~~~~~~~~~l~~~~g~~ 65 (264)
T 1yv9_A 20 KEPIPAGKRFVERLQEKDLPFLFVTNNTTKSPETVAQRLANEFDIH 65 (264)
T ss_dssp TEECHHHHHHHHHHHHTTCCEEEEECCCSSCHHHHHHHHHHHSCCC
T ss_pred CEECcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHhcCCC
Confidence 44446888999999999999999999988777777665 7763
No 152
>2obb_A Hypothetical protein; structural genomics, PSI-2, PR structure initiative, midwest center for structural genomic unknown function; 2.20A {Bacteroides thetaiotaomicron} SCOP: c.108.1.25
Probab=81.21 E-value=1.4 Score=42.23 Aligned_cols=39 Identities=21% Similarity=0.091 Sum_probs=33.5
Q ss_pred CCCCcHHHHHHHHHcCCeEEEEcCCC---hhhHHHHHHHcCc
Q 001017 701 LQNGVPECIDKLAQAGIKLWVLTGDK---METAINIGFACSL 739 (1189)
Q Consensus 701 lr~~v~~~I~~L~~aGIkv~mlTGD~---~~ta~~ia~~~gi 739 (1189)
+-+++.++|+.|+++|++++++||+. ...+.....+.|+
T Consensus 25 ~~~~~~~al~~l~~~G~~iii~TgR~~~~~~~~~~~l~~~gi 66 (142)
T 2obb_A 25 EIPFAVETLKLLQQEKHRLILWSVREGELLDEAIEWCRARGL 66 (142)
T ss_dssp BCTTHHHHHHHHHHTTCEEEECCSCCHHHHHHHHHHHHTTTC
T ss_pred cCHHHHHHHHHHHHCCCEEEEEeCCCcccHHHHHHHHHHcCC
Confidence 45789999999999999999999997 5667777778887
No 153
>3zvl_A Bifunctional polynucleotide phosphatase/kinase; hydrolase-transferase complex, base excision repair, BER, non-homologous END-joining, NHEJ; 1.65A {Mus musculus} PDB: 3zvm_A* 3zvn_A* 1yj5_A 3u7e_B* 3u7f_B* 3u7h_B* 3u7g_A*
Probab=80.76 E-value=1.7 Score=50.14 Aligned_cols=26 Identities=31% Similarity=0.498 Sum_probs=24.4
Q ss_pred CCCCcHHHHHHHHHcCCeEEEEcCCC
Q 001017 701 LQNGVPECIDKLAQAGIKLWVLTGDK 726 (1189)
Q Consensus 701 lr~~v~~~I~~L~~aGIkv~mlTGD~ 726 (1189)
+-+|+.++|+.|+++|+++.++|+..
T Consensus 88 ~~pgv~e~L~~L~~~G~~l~IvTN~~ 113 (416)
T 3zvl_A 88 LYPEIPKKLQELAAEGYKLVIFTNQM 113 (416)
T ss_dssp SCTTHHHHHHHHHHTTCEEEEEEECH
T ss_pred hcccHHHHHHHHHHCCCeEEEEeCCc
Confidence 67999999999999999999999965
No 154
>3i28_A Epoxide hydrolase 2; aromatic hydrocarbons catabolism, detoxification, magnesium, metal-binding, peroxisome; HET: 34N; 1.95A {Homo sapiens} PDB: 1s8o_A* 1zd2_P* 1vj5_A* 1zd4_A* 1zd5_A* 3i1y_A* 1zd3_A* 3koo_A* 3otq_A* 4hai_A* 1cqz_A 1cr6_A* 1ek1_A* 1ek2_A* 3ans_A* 3ant_A* 3pdc_A*
Probab=72.09 E-value=1.1 Score=53.51 Aligned_cols=26 Identities=19% Similarity=0.232 Sum_probs=24.4
Q ss_pred cCCCCcHHHHHHHHHcCCeEEEEcCC
Q 001017 700 KLQNGVPECIDKLAQAGIKLWVLTGD 725 (1189)
Q Consensus 700 ~lr~~v~~~I~~L~~aGIkv~mlTGD 725 (1189)
++.+|+.++++.|+++|+++.++|+-
T Consensus 100 ~~~~~~~~~L~~L~~~g~~~~i~Tn~ 125 (555)
T 3i28_A 100 KINRPMLQAALMLRKKGFTTAILTNT 125 (555)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEECC
T ss_pred CcChhHHHHHHHHHHCCCEEEEEeCC
Confidence 57899999999999999999999995
No 155
>2hhl_A CTD small phosphatase-like protein; CTD phosphatase, keggins anion, structural genomics, PSI, protein structure initiative; HET: KEG; 2.10A {Homo sapiens}
Probab=70.48 E-value=1.3 Score=45.19 Aligned_cols=41 Identities=12% Similarity=0.022 Sum_probs=37.9
Q ss_pred ccCCCCcHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcc
Q 001017 699 DKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLL 740 (1189)
Q Consensus 699 D~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~ 740 (1189)
=.+|||+.+.++.|++. +++.+.|.-....|..+...+++-
T Consensus 67 v~~RPgv~efL~~l~~~-~~i~I~Tss~~~~a~~vl~~ld~~ 107 (195)
T 2hhl_A 67 VLKRPHVDEFLQRMGQL-FECVLFTASLAKYADPVADLLDRW 107 (195)
T ss_dssp EEECTTHHHHHHHHHHH-SEEEEECSSCHHHHHHHHHHHCCS
T ss_pred EEeCcCHHHHHHHHHcC-CeEEEEcCCCHHHHHHHHHHhCCc
Confidence 46899999999999998 999999999999999999998873
No 156
>2g80_A Protein UTR4; YEL038W, UTR4 protein (unknown transcript 4 protein), struct genomics, PSI, protein structure initiative; 2.28A {Saccharomyces cerevisiae} SCOP: c.108.1.22
Probab=68.06 E-value=4 Score=43.46 Aligned_cols=35 Identities=3% Similarity=0.040 Sum_probs=28.0
Q ss_pred ccCCCCcHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHc
Q 001017 699 DKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFAC 737 (1189)
Q Consensus 699 D~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~ 737 (1189)
-++.||+.++++. |+++.++|+-....+..+-..+
T Consensus 124 ~~~~pgv~e~L~~----g~~l~i~Tn~~~~~~~~~l~~~ 158 (253)
T 2g80_A 124 APVYADAIDFIKR----KKRVFIYSSGSVKAQKLLFGYV 158 (253)
T ss_dssp BCCCHHHHHHHHH----CSCEEEECSSCHHHHHHHHHSB
T ss_pred CCCCCCHHHHHHc----CCEEEEEeCCCHHHHHHHHHhh
Confidence 3567788888777 9999999999988777766655
No 157
>2ght_A Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1; protein-peptide complex, HAD superfamily, hydrolase; HET: SEP; 1.80A {Homo sapiens} PDB: 2ghq_A* 3pgl_A* 1t9z_A* 1ta0_A* 3l0c_A 3l0y_A 3l0b_A* 2q5e_A
Probab=67.20 E-value=1.7 Score=43.68 Aligned_cols=41 Identities=10% Similarity=0.015 Sum_probs=37.8
Q ss_pred ccCCCCcHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcc
Q 001017 699 DKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLL 740 (1189)
Q Consensus 699 D~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~ 740 (1189)
=.+|||+.+.++.|++. +++.+.|.-....|..+...++.-
T Consensus 54 v~~rPg~~efL~~l~~~-~~i~I~T~~~~~~a~~vl~~ld~~ 94 (181)
T 2ght_A 54 VLKRPHVDEFLQRMGEL-FECVLFTASLAKYADPVADLLDKW 94 (181)
T ss_dssp EEECTTHHHHHHHHHHH-SEEEEECSSCHHHHHHHHHHHCTT
T ss_pred EEeCCCHHHHHHHHHhC-CCEEEEcCCCHHHHHHHHHHHCCC
Confidence 36899999999999998 999999999999999999988863
No 158
>3bwv_A Putative 5'(3')-deoxyribonucleotidase; NP_764060.1, deoxyribonucleotidase-like protein; HET: MSE; 1.55A {Staphylococcus epidermidis}
Probab=58.35 E-value=15 Score=36.32 Aligned_cols=25 Identities=12% Similarity=0.315 Sum_probs=23.0
Q ss_pred cCCCCcHHHHHHHHHcCCeEEEEcCC
Q 001017 700 KLQNGVPECIDKLAQAGIKLWVLTGD 725 (1189)
Q Consensus 700 ~lr~~v~~~I~~L~~aGIkv~mlTGD 725 (1189)
++.||+.++++.|++. +++.++|+-
T Consensus 69 ~~~pg~~e~L~~L~~~-~~~~i~T~~ 93 (180)
T 3bwv_A 69 DVMPHAQEVVKQLNEH-YDIYIATAA 93 (180)
T ss_dssp CBCTTHHHHHHHHTTT-SEEEEEECC
T ss_pred CCCcCHHHHHHHHHhc-CCEEEEeCC
Confidence 6789999999999984 999999996
No 159
>2i7d_A 5'(3')-deoxyribonucleotidase, cytosolic type; hydrolase; HET: DUR; 1.20A {Homo sapiens} PDB: 2jar_A* 2jao_A*
Probab=54.68 E-value=4 Score=41.20 Aligned_cols=41 Identities=7% Similarity=0.127 Sum_probs=35.8
Q ss_pred ccCCCCcHHHHHHHHHc-CCeEEEEcCCChhhHHHHHHHcCc
Q 001017 699 DKLQNGVPECIDKLAQA-GIKLWVLTGDKMETAINIGFACSL 739 (1189)
Q Consensus 699 D~lr~~v~~~I~~L~~a-GIkv~mlTGD~~~ta~~ia~~~gi 739 (1189)
-++.||+.++++.|+++ |+++.++|+.....+..+...+|+
T Consensus 72 ~~~~~g~~e~L~~L~~~~g~~~~ivT~~~~~~~~~~l~~~gl 113 (193)
T 2i7d_A 72 LEPIPGALDAVREMNDLPDTQVFICTSPLLKYHHCVGEKYRW 113 (193)
T ss_dssp CCBCTTHHHHHHHHHTSTTEEEEEEECCCSSCTTTHHHHHHH
T ss_pred CccCcCHHHHHHHHHhCCCCeEEEEeCCChhhHHHHHHHhCc
Confidence 36789999999999999 999999999988877777777766
No 160
>1xpj_A Hypothetical protein; structural genomics, MCSG, protein STR initiative, PSI, midwest center for structural genomics, UN function; HET: TLA; 2.30A {Vibrio cholerae} SCOP: c.108.1.18
Probab=47.56 E-value=9.8 Score=35.42 Aligned_cols=30 Identities=23% Similarity=0.238 Sum_probs=26.5
Q ss_pred cCCCCcHHHHHHHHHcCCeEEEEcCCChhh
Q 001017 700 KLQNGVPECIDKLAQAGIKLWVLTGDKMET 729 (1189)
Q Consensus 700 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~t 729 (1189)
++.+++.++|+.|+++|+++.++||+....
T Consensus 24 ~~~~~~~~~l~~l~~~Gi~~~iaTGR~~~~ 53 (126)
T 1xpj_A 24 LPRLDVIEQLREYHQLGFEIVISTARNMRT 53 (126)
T ss_dssp CBCHHHHHHHHHHHHTTCEEEEEECTTTTT
T ss_pred CCCHHHHHHHHHHHhCCCeEEEEeCCChhh
Confidence 456789999999999999999999998654
No 161
>1q92_A 5(3)-deoxyribonucleotidase; alpha-beta rossman fold, hydrolase; HET: DRM; 1.40A {Homo sapiens} SCOP: c.108.1.8 PDB: 1mh9_A* 1q91_A* 1z4m_A* 1z4i_A* 1z4j_A* 1z4l_A* 1z4k_A* 1z4p_X* 1z4q_A* 2jau_A* 2jaw_A* 3u19_A* 3u13_A 4e88_A
Probab=44.84 E-value=7.8 Score=39.14 Aligned_cols=41 Identities=10% Similarity=0.036 Sum_probs=35.2
Q ss_pred cCCCCcHHHHHHHHHc-CCeEEEEcCCChhhHHHHHHHcCcc
Q 001017 700 KLQNGVPECIDKLAQA-GIKLWVLTGDKMETAINIGFACSLL 740 (1189)
Q Consensus 700 ~lr~~v~~~I~~L~~a-GIkv~mlTGD~~~ta~~ia~~~gi~ 740 (1189)
++.||+.++++.|++. |+++.++|+-....+..+....|+.
T Consensus 75 ~~~~g~~e~L~~L~~~~g~~~~ivT~~~~~~~~~~l~~~~l~ 116 (197)
T 1q92_A 75 EPLPGAVEAVKEMASLQNTDVFICTSPIKMFKYCPYEKYAWV 116 (197)
T ss_dssp CBCTTHHHHHHHHHHSTTEEEEEEECCCSCCSSHHHHHHHHH
T ss_pred CcCcCHHHHHHHHHhcCCCeEEEEeCCccchHHHHHHHhchH
Confidence 6789999999999999 9999999999887776666666663
No 162
>1zjj_A Hypothetical protein PH1952; alpha/beta hydrolase fold, HAD superfamily, structural genom riken structural genomics/proteomics initiative; 1.85A {Pyrococcus horikoshii}
Probab=41.23 E-value=13 Score=39.34 Aligned_cols=42 Identities=24% Similarity=0.255 Sum_probs=34.7
Q ss_pred cccCCCCcHHHHHHHHHcCCeEEEEcCCChhhHHHHHHH---cCc
Q 001017 698 EDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFA---CSL 739 (1189)
Q Consensus 698 eD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~---~gi 739 (1189)
.+.+-+++.++|+.|+++|+++.++||....+...++.. +|+
T Consensus 15 ~~~~~~~~~~~l~~l~~~g~~~~~~T~r~~~~~~~~~~~l~~lg~ 59 (263)
T 1zjj_A 15 GNRAIPGVRELIEFLKERGIPFAFLTNNSTKTPEMYREKLLKMGI 59 (263)
T ss_dssp TTEECTTHHHHHHHHHHHTCCEEEEESCCSSCHHHHHHHHHTTTC
T ss_pred CCEeCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHCCC
Confidence 344448999999999999999999999998877777765 465
No 163
>1zjj_A Hypothetical protein PH1952; alpha/beta hydrolase fold, HAD superfamily, structural genom riken structural genomics/proteomics initiative; 1.85A {Pyrococcus horikoshii}
Probab=40.22 E-value=36 Score=35.82 Aligned_cols=51 Identities=14% Similarity=0.264 Sum_probs=34.7
Q ss_pred CCCeEEEEcCCC-CChhhhhhcCee-EEec-CCcch-hhh---hccccccccchhhHH
Q 001017 849 TSSTTLAIGDGA-NDVGMLQEADIG-VGIS-GVEGM-QAV---MSSDIAIAQFRFLER 899 (1189)
Q Consensus 849 ~~~~vl~iGDG~-ND~~ml~~A~vG-I~i~-g~~~~-~a~---~~sD~~i~~f~~l~~ 899 (1189)
..+.++||||+. +|+.+-++|++. |.+. |.... ... ..+|+++.++.-+..
T Consensus 201 ~~~~~~~VGD~~~~Di~~A~~aG~~~i~v~~g~~~~~~~~~~~~~p~~~~~~l~el~~ 258 (263)
T 1zjj_A 201 PGEELWMVGDRLDTDIAFAKKFGMKAIMVLTGVSSLEDIKKSEYKPDLVLPSVYELID 258 (263)
T ss_dssp TTCEEEEEESCTTTHHHHHHHTTCEEEEESSSSCCHHHHTTCSSCCSEEESSGGGGGG
T ss_pred CcccEEEECCChHHHHHHHHHcCCeEEEECCCCCChHHHHhcCCCCCEEECCHHHHHH
Confidence 467899999995 999999999985 4553 22211 111 157888887666544
No 164
>3kc2_A Uncharacterized protein YKR070W; HAD-like, mitochondral protein, PSI, MCSG, structural genomi protein structure initiative; HET: MSE; 1.55A {Saccharomyces cerevisiae} PDB: 3rf6_A*
Probab=37.93 E-value=25 Score=39.31 Aligned_cols=48 Identities=17% Similarity=0.094 Sum_probs=37.5
Q ss_pred EeeeecccCCCCcHHHHHHHHHcCCeEEEEcCCCh----hhHHHHHHHcCcc
Q 001017 693 GATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKM----ETAINIGFACSLL 740 (1189)
Q Consensus 693 G~~~ieD~lr~~v~~~I~~L~~aGIkv~mlTGD~~----~ta~~ia~~~gi~ 740 (1189)
|++.-.+.+-+++.++|+.|+++|+++.++|+... +.+..+.+.+|+-
T Consensus 22 Gvl~~g~~~~p~a~~~l~~l~~~g~~~~~vTNn~~~~~~~~~~~l~~~lgi~ 73 (352)
T 3kc2_A 22 GVLFRGKKPIAGASDALKLLNRNKIPYILLTNGGGFSERARTEFISSKLDVD 73 (352)
T ss_dssp TTTEETTEECTTHHHHHHHHHHTTCCEEEECSCCSSCHHHHHHHHHHHHTSC
T ss_pred CeeEcCCeeCcCHHHHHHHHHHCCCEEEEEeCCCCCCchHHHHHHHHhcCCC
Confidence 55555677779999999999999999999998763 4455555567873
No 165
>2jc9_A Cytosolic purine 5'-nucleotidase; cytosolic 5-prime nucleotidase II, GMP-IMP specific nucleotidase, CN-II, NT5C2, hydrolase, polymorphism; HET: ADN; 1.5A {Homo sapiens} PDB: 2j2c_A* 2xje_A* 2xjf_A* 2jcm_A* 2xcw_A* 2xcv_A* 2xcx_A 2xjb_A* 2xjc_A* 2xjd_A*
Probab=37.38 E-value=59 Score=38.18 Aligned_cols=36 Identities=14% Similarity=0.262 Sum_probs=32.6
Q ss_pred CCcHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHc-Cc
Q 001017 703 NGVPECIDKLAQAGIKLWVLTGDKMETAINIGFAC-SL 739 (1189)
Q Consensus 703 ~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~-gi 739 (1189)
++++..+++|+++| |+.++|.-+..-+..++..+ |+
T Consensus 249 p~l~~~L~~Lr~~G-KlfLiTNS~~~yv~~~m~yllg~ 285 (555)
T 2jc9_A 249 GKLPLLLSRMKEVG-KVFLATNSDYKYTDKIMTYLFDF 285 (555)
T ss_dssp THHHHHHHHHHHHS-EEEEECSSCHHHHHHHHHHHTCS
T ss_pred hHHHHHHHHHHHcC-CEEEEeCCChHHHHHHHHHhcCC
Confidence 57899999999999 99999999999998888887 64
No 166
>2jmz_A Hypothetical protein MJ0781; unknown function; NMR {Methanocaldococcus jannaschii} PDB: 2jnq_A
Probab=33.20 E-value=31 Score=34.55 Aligned_cols=36 Identities=19% Similarity=0.228 Sum_probs=28.3
Q ss_pred cceEEEEecCCeEEEeecccCccccEEEeccCCcCCc
Q 001017 137 NRKVKVHCGEGAFDYTKWRDLKVGDVVKVEKDEFFPA 173 (1189)
Q Consensus 137 ~~~~~v~~r~g~~~~i~~~~l~vGDII~l~~ge~iPa 173 (1189)
+-...+. ++|+++.++.++|++||.|.+..+..++.
T Consensus 102 ~Hp~~v~-~~g~~~w~~A~eLk~GD~v~~~~~~~~~~ 137 (186)
T 2jmz_A 102 DHPVYIS-KTGEVLEINAEMVKVGDYIYIPKNNTINL 137 (186)
T ss_dssp TCEEEEE-ETTEEEEEEGGGCCTTSEEEEECSSSEEE
T ss_pred CCEEEEe-CCCeEEEEEhhcCCCCCEEEecccCCccc
Confidence 4456777 78888999999999999999877544443
No 167
>2hx1_A Predicted sugar phosphatases of the HAD superfamily; ZP_00311070.1, possible sugar phosphatase, structural genomics; HET: MSE EPE; 2.10A {Cytophaga hutchinsonii}
Probab=32.45 E-value=33 Score=36.59 Aligned_cols=44 Identities=18% Similarity=0.253 Sum_probs=35.6
Q ss_pred ecccCCCCcHHHHHHHHHcCCeEEEEcC---CChhhHHHHHHHcCcc
Q 001017 697 VEDKLQNGVPECIDKLAQAGIKLWVLTG---DKMETAINIGFACSLL 740 (1189)
Q Consensus 697 ieD~lr~~v~~~I~~L~~aGIkv~mlTG---D~~~ta~~ia~~~gi~ 740 (1189)
-.+++-+++.++|+.|+++|++++++|| ..........+.+|+-
T Consensus 27 ~~~~~~~~~~~~l~~l~~~g~~~~~~Tn~~~r~~~~~~~~l~~lg~~ 73 (284)
T 2hx1_A 27 TYNGLLPGIENTFDYLKAQGQDYYIVTNDASRSPEQLADSYHKLGLF 73 (284)
T ss_dssp ETTEECTTHHHHHHHHHHTTCEEEEEECCCSSCHHHHHHHHHHTTCT
T ss_pred cCCeeChhHHHHHHHHHHCCCEEEEEeCCCCcCHHHHHHHHHHCCcC
Confidence 3456668999999999999999999996 5666666777777774
No 168
>1ccw_A Protein (glutamate mutase); coenzyme B12, radical reaction, TIM-barrel rossman-fold, isomerase; HET: CNC TAR; 1.60A {Clostridium cochlearium} SCOP: c.23.6.1 PDB: 1cb7_A* 1b1a_A 1i9c_A* 1be1_A 1fmf_A 1id8_A*
Probab=30.96 E-value=1e+02 Score=28.90 Aligned_cols=80 Identities=11% Similarity=0.088 Sum_probs=55.0
Q ss_pred HHHhccCeEEEEEEEecCHHHHHHHHHHHHHHhhhhhhcHHHHHHHHHHHHhcCceEEEeeeecccCCCCcHHHHHHHHH
Q 001017 635 EYADAGLRTLILAYRELDEKEYKQFNEEFTEAKNSVSADREELAEEIAEKIEKNLILLGATAVEDKLQNGVPECIDKLAQ 714 (1189)
Q Consensus 635 ~~a~~Glr~l~~a~r~l~~~e~~~~~~~~~~a~~~~~~~~~~~~~~~~~~ie~~l~llG~~~ieD~lr~~v~~~I~~L~~ 714 (1189)
-+...|++|+-++. ..+.+++-+ ...+.+-.++|+-+.-..--+.++++++.|++
T Consensus 26 ~l~~~G~~Vi~lG~-~~p~e~~v~------------------------~a~~~~~d~v~lS~~~~~~~~~~~~~i~~l~~ 80 (137)
T 1ccw_A 26 AFTNAGFNVVNIGV-LSPQELFIK------------------------AAIETKADAILVSSLYGQGEIDCKGLRQKCDE 80 (137)
T ss_dssp HHHHTTCEEEEEEE-EECHHHHHH------------------------HHHHHTCSEEEEEECSSTHHHHHTTHHHHHHH
T ss_pred HHHHCCCEEEECCC-CCCHHHHHH------------------------HHHhcCCCEEEEEecCcCcHHHHHHHHHHHHh
Confidence 46789999999886 556654321 23346777888888887777788999999999
Q ss_pred cCC--eEEEEcCCC------hhhHHHHHHHcCc
Q 001017 715 AGI--KLWVLTGDK------METAINIGFACSL 739 (1189)
Q Consensus 715 aGI--kv~mlTGD~------~~ta~~ia~~~gi 739 (1189)
+|. ..+++-|-. .......+++.|.
T Consensus 81 ~g~~~i~v~vGG~~~~~~~~~~~~~~~~~~~G~ 113 (137)
T 1ccw_A 81 AGLEGILLYVGGNIVVGKQHWPDVEKRFKDMGY 113 (137)
T ss_dssp TTCTTCEEEEEESCSSSSCCHHHHHHHHHHTTC
T ss_pred cCCCCCEEEEECCCcCchHhhhhhHHHHHHCCC
Confidence 875 234555532 1222456888887
No 169
>3n28_A Phosphoserine phosphatase; HAD family hydrolase, structural genomics, PSI, protein STRU initiative, nysgrc; 2.30A {Vibrio cholerae}
Probab=28.48 E-value=32 Score=37.89 Aligned_cols=48 Identities=15% Similarity=-0.001 Sum_probs=38.6
Q ss_pred eeeecccCCCCcHHHHHHHH-Hc----------CCeEEEEcCCChhhHHHHHHHcCccc
Q 001017 694 ATAVEDKLQNGVPECIDKLA-QA----------GIKLWVLTGDKMETAINIGFACSLLR 741 (1189)
Q Consensus 694 ~~~ieD~lr~~v~~~I~~L~-~a----------GIkv~mlTGD~~~ta~~ia~~~gi~~ 741 (1189)
++.+..++-+...+.+.++. .+ |+.+|++|||..+....++.+.|+..
T Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~atGr~~~~l~~~~~~~gld~ 95 (335)
T 3n28_A 37 WIVFGHYLTPAQFEDMDFFTNRFNAILDMWKVGRYEVALMDGELTSEHETILKALELDY 95 (335)
T ss_dssp EEEEESCCCHHHHHHHHHHHTSCCCEEEEEEETTEEEEEESSCCCHHHHHHHHHHTCEE
T ss_pred EEEECCCCCHHHHHHHHHHhcccccchheeecccceEEEecCCchHHHHHHHHHcCCCE
Confidence 44455667777778888887 33 89999999999999999999999843
No 170
>2lcj_A PAB POLC intein; hydrolase; NMR {Pyrococcus abyssi}
Probab=26.48 E-value=60 Score=32.33 Aligned_cols=35 Identities=29% Similarity=0.287 Sum_probs=28.3
Q ss_pred cceEEEEecCCeEEEeecccCccccEEEeccCCcCC
Q 001017 137 NRKVKVHCGEGAFDYTKWRDLKVGDVVKVEKDEFFP 172 (1189)
Q Consensus 137 ~~~~~v~~r~g~~~~i~~~~l~vGDII~l~~ge~iP 172 (1189)
+-...+. ++|..+.+..++|++||.|.+..++.-|
T Consensus 92 ~H~~~v~-~~g~~~~~~A~eLk~GD~v~v~~~~~~~ 126 (185)
T 2lcj_A 92 DHPVLVY-ENGRFIEKRAFEVKEGDKVLVSELELVE 126 (185)
T ss_dssp SSEEEEE-ETTEEEEEEGGGCCTTCEEEECCCCCSC
T ss_pred CCEEEEe-cCCeEEEEEHHHCCCCCEEEEccccccc
Confidence 3446666 7888899999999999999998877544
No 171
>1d1n_A Initiation factor 2; beta-barrel, gene regulation; NMR {Geobacillus stearothermophilus} SCOP: b.43.3.1
Probab=23.44 E-value=89 Score=27.57 Aligned_cols=21 Identities=24% Similarity=0.363 Sum_probs=17.2
Q ss_pred ecccCccccEEEeccCCcCCc
Q 001017 153 KWRDLKVGDVVKVEKDEFFPA 173 (1189)
Q Consensus 153 ~~~~l~vGDII~l~~ge~iPa 173 (1189)
.+.|+++||+|....-..+|.
T Consensus 78 ~~~dik~GD~Ie~ye~~ev~r 98 (99)
T 1d1n_A 78 NFNDIKEGDVIEAYVMQEVAR 98 (99)
T ss_dssp TCSSCSSCSEEEEECCSCCCC
T ss_pred CcCCCCCCCEEEEEEEEEEcC
Confidence 578999999999887776663
No 172
>3fst_A 5,10-methylenetetrahydrofolate reductase; TIM barrel, flavin, amino-acid biosynthesis, FAD, flavoprotein, methionine biosynthesis, NAD; HET: FAD MRY; 1.65A {Escherichia coli k-12} PDB: 3fsu_A* 1zp3_A* 1zpt_A* 1zrq_A* 1zp4_A* 2fmn_A* 2fmo_A* 1b5t_A*
Probab=20.98 E-value=92 Score=33.73 Aligned_cols=44 Identities=16% Similarity=0.113 Sum_probs=37.4
Q ss_pred hcCceEEEeeeecccCCCCcHHHHHHHHHcCC-eEEEEcCCChhh
Q 001017 686 EKNLILLGATAVEDKLQNGVPECIDKLAQAGI-KLWVLTGDKMET 729 (1189)
Q Consensus 686 e~~l~llG~~~ieD~lr~~v~~~I~~L~~aGI-kv~mlTGD~~~t 729 (1189)
+.+++.+--+.-.|.=+.+..+.+..++++|| .+..||||.+..
T Consensus 80 ~~g~~~v~Hltc~~~~~~~l~~~L~~~~~~GI~nILaLrGDpp~~ 124 (304)
T 3fst_A 80 RTGLEAAPHLTCIDATPDELRTIARDYWNNGIRHIVALRGDLPPG 124 (304)
T ss_dssp HHCCCEEEEEESTTSCHHHHHHHHHHHHHTTCCEEEEECCCCC--
T ss_pred HhCCCeeEEeecCCCCHHHHHHHHHHHHHCCCCEEEEecCCCCCC
Confidence 35788888888899999999999999999999 689999998865
Done!