BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 001018
(1188 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q08BT5|K1468_XENTR LisH domain and HEAT repeat-containing protein KIAA1468 homolog
OS=Xenopus tropicalis PE=2 SV=1
Length = 1196
Score = 300 bits (767), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 200/676 (29%), Positives = 332/676 (49%), Gaps = 71/676 (10%)
Query: 459 GTIQILADALPKIVPYVLINHREELLPLIMCAIERHPDTSTRDSLTHTLFNLIKRPDEKQ 518
G +++L LP IVP VL+ REEL+PLI+C HP++ RD L H LFNLIKRPD++Q
Sbjct: 498 GVMKMLGRCLPHIVPNVLLAKREELIPLILCTACLHPESKERDQLLHILFNLIKRPDDEQ 557
Query: 519 RRIIMDACVTLAKNVGEMRTEMELLPQCWEQINHMYEERRLLVAQSCGELAEFVRPEIRD 578
R++I+ CV A++VG R E ELLPQCWEQINH Y ERRLLVA+SCG+LA ++ EIR
Sbjct: 558 RQMILTGCVAFARHVGPTRVEAELLPQCWEQINHKYPERRLLVAESCGDLAPYLPKEIRS 617
Query: 579 SLILSIVQQ-LVEDSATVVREAAARNLALLLPLFPNTDKYFKVEDLMFQLVCDPSGVVVE 637
SL+L+++QQ L+ED A +VREA ++L +++ + DKY + +L+ + DPS VV
Sbjct: 618 SLVLAMLQQMLMEDKADMVREAVIKSLGIIMGYIDDPDKYSQGFELLLTALGDPSERVVS 677
Query: 638 TTFKELLPAVINWGSKLDHILRVLLSYILSSAQRCPPLSGVEGSVESHLRVLGERERWNL 697
T + LPA W +L ++ L+ +LS ++ L E ++ H L
Sbjct: 678 ATHQVFLPAYAAWTMELGNLQSHLIPTLLSKIEKL--LKEGEHGLDEH----------KL 725
Query: 698 EVLLRMMAELLPFMQKNAIETCPFSS-------VSLSEETVFP----------------- 733
+ L + L+P + ++ PF+S V E T FP
Sbjct: 726 HMYLSALQSLIPSLFATVLQNAPFTSKAKLQGEVPQIEVTRFPRPVSPLQDVATIIGSRE 785
Query: 734 --SSLLELY-----AGGHIEWPAFEWMHVDCFPGLIQLACLLPEKEDNLRNRITKFLLAV 786
+ LL+LY G W + W+ P LI++ + + ++F +
Sbjct: 786 QLAVLLQLYDYQLEHEGTTGWESLLWVVNQLLPQLIEIVGRITVTSTASVHEFSRFFWRL 845
Query: 787 SKQFGDSYLTHIMLPVFMVAVGDNANLTFFPSTIHSGIRGLKPRTAVGERLATMGVLPLL 846
+ FG + + P F L I S G + T +P+
Sbjct: 846 CRTFGKIFTNTKVKPQF------QEILRLSEENIDS---------TAGNGVLTKATVPIY 890
Query: 847 LAGVLGAPSKHDQ---LADYLRKLLVEGTMKENHTVKCNAEIVNAVRFLCTFEEHHTMVF 903
GVL ++ + L +L ++ ++ A V L T +H ++
Sbjct: 891 ATGVLTCYNQEEDRKLLVGFLEDVMTMLSLSHAPLDSLKASFVE----LGTNPAYHELLL 946
Query: 904 NILWEMVVSSNIDMKINAANLLKVIVPYINAKVTSMQVLPALVTLGSDQNLNVKYASIDA 963
+LW VV ++ ++ AA + +++V +N + + +V+PAL+TL SD ++V+ A++ A
Sbjct: 947 TVLWYGVVHTSALVRCTAARMFELLVKGVNETLVAQRVVPALITLSSDPEISVRIATVPA 1006
Query: 964 FGAVAQHFKNDMIVDKIRVQMDAFLED----GSHEATVAVVRALAVAVPHTTERLR-DYL 1018
FG + + +++++++Q+ +FLED H ++R P+ R R D++
Sbjct: 1007 FGTIMETVTQRELLERVKMQLASFLEDPQYQDQHSLQTEIIRTFGRVGPNAEPRFRDDFV 1066
Query: 1019 LSKIFQLSAVPSSSSDVMRRRERANAFCESIRALDATELSATSVRDFLLPAIQNLLKDAD 1078
L + +LS V + S +R + A E+ AL +S + + LP ++ L D +
Sbjct: 1067 LPHLHKLSFVNNQQSVDSKRLDIATHLFEAYSALSCCFISEELMMNHFLPGLRCLRTDME 1126
Query: 1079 SLDPAHKEALEIIMKD 1094
L P H+ L ++K+
Sbjct: 1127 QLSPEHEVILSSMIKE 1142
Score = 62.0 bits (149), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 90/196 (45%), Gaps = 27/196 (13%)
Query: 10 NCVVNFLLEEKYLLTAFELLQELLDDGRDAQAIRLKEFFSDPSHFPPDLITRFNSLRVAD 69
+ V LL ++ LLTA EL ELL+ GR+ RL+++FS+P +F A
Sbjct: 114 DAVAAQLLRDQLLLTALELHTELLESGRELP--RLRDYFSNPGNF---------ERATAA 162
Query: 70 PQSLLEEKEALVEKLAITEYELRLAQEDVTKLKAELKKKSDSSLENLNESNENNHGNHGV 129
P A T +L A T + + SD N + + V
Sbjct: 163 PPGFGGNTT------ASTGGQLNRAGSISTLDSLDFARYSDDG----NRETDERVAENEV 212
Query: 130 EFQRQKRDISFSDLG-PLKDIERKDLNCAVKEYLLLAGYRLTAMTFYEEVTDQNLDIWQ- 187
Q +K S ++ P+K +E++ LN V EYLL +LT++TF +E DQ+ ++W
Sbjct: 213 PLQERKNYKSSPEIQEPIKPLEKRALNFLVNEYLLKNNNKLTSITFSDENDDQDFELWDD 272
Query: 188 ---NTPARVPDALRHY 200
NTP + PD L+ Y
Sbjct: 273 VGLNTP-KPPDLLQLY 287
>sp|Q148V7|K1468_MOUSE LisH domain and HEAT repeat-containing protein KIAA1468 OS=Mus
musculus GN=Kiaa1468 PE=1 SV=1
Length = 1216
Score = 285 bits (729), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 227/825 (27%), Positives = 389/825 (47%), Gaps = 96/825 (11%)
Query: 326 EEIKSLLKEIERLRAKSTNASDSLGSVYSESMQTEEKVVEVDEDKTVLAHPSVEVVNSED 385
E+I+ L E++ L+A+ A+ ++G S+ + D ++ P+V + E
Sbjct: 378 EQIRRLESEMDILKAEHF-ATPAVGDSVQPSLVWSSQKDSEDNRQS----PAVNSSDQEK 432
Query: 386 AQSLATQTPDNNTAKQPNEVLQGESTSSLKENIASENSENVPNLNDESPLKDSGLPLQSD 445
+ + + PD + P E G +E + + N L+ + P +
Sbjct: 433 TKDVHLEIPDAADSFIPKENSSGSFPRKEREELPPSSVSNKTTLHFDQPNRKLSPAFHQA 492
Query: 446 NASLEAASDKMGLGT------------IQILADALPKIVPYVLINHREELLPLIMCAIER 493
S S LG+ + +L LP IVP VL+ REEL+PLI+C
Sbjct: 493 LLSFCRMSADSRLGSEVSRIADSEKSVMLMLGRCLPHIVPNVLLAKREELIPLILCTACL 552
Query: 494 HPDTSTRDSLTHTLFNLIKRPDEKQRRIIMDACVTLAKNVGEMRTEMELLPQCWEQINHM 553
HP+ RD L H LFNLIKRPD++QR++I+ CV A++VG R E ELLPQCWEQINH
Sbjct: 553 HPEPKERDQLLHILFNLIKRPDDEQRQMILTGCVAFARHVGPTRVEAELLPQCWEQINHK 612
Query: 554 YEERRLLVAQSCGELAEFVRPEIRDSLILSIVQQ-LVEDSATVVREAAARNLALLLPLFP 612
Y ERRLLVA+SCG LA ++ EIR SL+LS++QQ L+ED A +VREA ++L +++
Sbjct: 613 YPERRLLVAESCGALAPYLPKEIRSSLVLSMLQQMLMEDKADLVREAVIKSLGIIMGYID 672
Query: 613 NTDKYFKVEDLMFQLVCDPSGVVVETTFKELLPAVINWGSKLDHILRVLLSYILSSAQRC 672
+ DKY + +L+ + DPS VV T + LPA W ++L ++ L+ +L+ ++
Sbjct: 673 DPDKYQQGFELLLSALGDPSERVVSATHQVFLPAYAAWTTELGNLQSHLIPTLLNKIEKL 732
Query: 673 PPLSGVEGSVESHLRVLGERERWNLEVLLRMMAELLPFMQKNAIETCPFSS-------VS 725
L E ++ H L + L + L+P + ++ PFSS V
Sbjct: 733 --LREGEHGLDEH----------KLHMYLSALQSLIPSLFALVLQNAPFSSKAKLHGEVP 780
Query: 726 LSEETVFP-------------------SSLLELY-----AGGHIEWPAFEWMHVDCFPGL 761
E T FP + LL+LY G W + W+ P L
Sbjct: 781 HIEVTRFPRPMSPLQDVSTIIGSREQLAVLLQLYDYQLEHEGTTGWESLLWVVNQLLPQL 840
Query: 762 IQLACLLPEKEDNLRNRITKFLLAVSKQFGDSYLTHIMLPVFMVAVGDNANLTFFPSTIH 821
I++ + + ++F + + FG + + P F L I
Sbjct: 841 IEIVGKINVTSTACVHEFSRFFWRLCRTFGKIFTNTKVKPQF------QEILRLSEENID 894
Query: 822 SGIRGLKPRTAVGERLATMGVLPLLLAGVLGAPSKHDQLADYLRKLLVEGTMKENHT-VK 880
S + G + T +P+ GVL + + RKLLV G +++ T +
Sbjct: 895 S---------SAGNGVLTKATVPIYATGVLTCYIQEED-----RKLLV-GFLEDVMTLLS 939
Query: 881 CNAEIVNAVRFLCTFEE------HHTMVFNILWEMVVSSNIDMKINAANLLKVIVPYINA 934
+ +++++ +F E +H ++ +LW VV ++ ++ AA + +++V +N
Sbjct: 940 LSHAPLDSLK--ASFVELGANPAYHELLLTVLWYGVVHTSALVRCTAARMFELLVKGVNE 997
Query: 935 KVTSMQVLPALVTLGSDQNLNVKYASIDAFGAVAQHFKNDMIVDKIRVQMDAFLED---- 990
+ + +V+PAL+TL SD ++V+ A+I AFG + + +++++++Q+ +FLED
Sbjct: 998 TLVAQRVVPALITLSSDPEISVRIATIPAFGTIMETVIQRELLERVKMQLASFLEDPQYQ 1057
Query: 991 GSHEATVAVVRALAVAVPHTTERLRD-YLLSKIFQLSAVPSSSSDVMRRRERANAFCESI 1049
H V+R P+ R RD +++ + +L+ V + ++ + A E+
Sbjct: 1058 DQHSLHTEVIRTFGRVGPNAEPRFRDEFVIPHLHKLALVNNLQIVDSKKLDIATHLFEAY 1117
Query: 1050 RALDATELSATSVRDFLLPAIQNLLKDADSLDPAHKEALEIIMKD 1094
AL +S + + LP ++ L D + L P H+ L ++K+
Sbjct: 1118 SALSCCFISEDLMVNHFLPGLRCLRTDMEHLSPEHEVILSSMIKE 1162
Score = 79.0 bits (193), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 105/227 (46%), Gaps = 61/227 (26%)
Query: 16 LLEEKYLLTAFELLQELLDDGRDAQAIRLKEFFSDPSHF------PPDL----------- 58
LL ++YLLTA EL ELL+ GR+ RL+++FS+P +F PP +
Sbjct: 101 LLRDQYLLTALELHTELLESGRELP--RLRDYFSNPGNFERQSGTPPGMGAPGIPGASIV 158
Query: 59 ----------------ITRFNSLRVADPQSLL----EEKEALVEKLAITEYELRLAQEDV 98
+ R S+ D + E++A+ E+ELR A+E +
Sbjct: 159 GGAGGREPSTTSGGGQLNRAGSISTLDSLDFARYSDDGNRETDERVAVLEFELRKAKETI 218
Query: 99 TKLKAELKKKSDSSLENLNESNENNHGNHGVEFQRQKRDISFSDLG-PLKDIERKDLNCA 157
L+A L K ++ H V Q +K S ++ P+K +E++ LN
Sbjct: 219 QALRANLTKAAE----------------HEVPLQERKNYKSSPEIQEPIKPLEKRALNFL 262
Query: 158 VKEYLLLAGYRLTAMTFYEEVTDQNLDIWQ----NTPARVPDALRHY 200
V E+LL Y+LT++TF +E DQ+ ++W N P + PD L+ Y
Sbjct: 263 VNEFLLKNNYKLTSITFSDENDDQDFELWDDVGLNIP-KPPDLLQLY 308
>sp|Q6P6Y1|K1468_DANRE LisH domain and HEAT repeat-containing protein KIAA1468 homolog
OS=Danio rerio GN=zgc:66014 PE=2 SV=1
Length = 1189
Score = 285 bits (728), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 203/716 (28%), Positives = 346/716 (48%), Gaps = 86/716 (12%)
Query: 463 ILADALPKIVPYVLINHREELLPLIMCAIERHPDTSTRDSLTHTLFNLIKRPDEKQRRII 522
+L LP IVP VL+ REEL+PLI+C HP+ RD L H LFNLIKRPD++QR++I
Sbjct: 495 MLGRCLPHIVPNVLLAKREELIPLILCTACLHPEPKERDQLLHILFNLIKRPDDEQRQMI 554
Query: 523 MDACVTLAKNVGEMRTEMELLPQCWEQINHMYEERRLLVAQSCGELAEFVRPEIRDSLIL 582
+ CV A++VG R E ELLPQCWEQINH Y ERRLLVA++CG LA ++ EIR SL+L
Sbjct: 555 LTGCVAFAQHVGPTRVEAELLPQCWEQINHKYPERRLLVAEACGALAPYLPKEIRSSLVL 614
Query: 583 SIVQQ-LVEDSATVVREAAARNLALLLPLFPNTDKYFKVEDLMFQLVCDPSGVVVETTFK 641
S++QQ L +D A +VREA ++L +++ + DKY + +LM + DPS VV T +
Sbjct: 615 SMLQQMLADDKADMVREAVVKSLGVIMGYIDDPDKYSQGFELMLLSLGDPSERVVSATHQ 674
Query: 642 ELLPAVINWGSKLDHILRVLLSYILSSAQRCPPLSGVEGSVESHLRVLGERERWNLEVLL 701
+PA W ++L ++ L+ +L+ ++ L E ++ H L + L
Sbjct: 675 VFIPAFAAWCTELGNLQSQLIPSLLTRIEKL--LKQGEYGLDEH----------KLHMYL 722
Query: 702 RMMAELLPFMQKNAIETCPFSS-------VSLSEETVFP-------------------SS 735
+ L+P + ++ PF+S V E T FP +
Sbjct: 723 SALQSLIPSLFAVLLQNAPFTSRVKLQGDVPPIEVTRFPRPASPLQDVATIVGSREQLAV 782
Query: 736 LLELYAG-----GHIEWPAFEWMHVDCFPGLIQLACLLPEKEDNLRNRITKFLLAVSKQF 790
LL LY G W + W+ P +I + + + ++F + + F
Sbjct: 783 LLHLYDHQLQHEGTTGWDSLLWVVNQFLPQIIDIVGRINVTSSTCVHEFSRFFWRLCRTF 842
Query: 791 GDSYLTHIMLPVFMVAVG---DNANLTFFPSTIHSGIRGLKPRTAVGERLATMGVLPLLL 847
G + + P F + +N + T G + T +P+
Sbjct: 843 GKIFTNTKVKPQFQEILRLSEENVDAT------------------AGNGILTKATVPIYA 884
Query: 848 AGVLGAPSKHDQLADYLRKLLVEGTMKENHTVKCNAEIVNAVRFLCTFEE------HHTM 901
GVL + ++Q D RKLLV T+ + +++++ +F E +H +
Sbjct: 885 TGVL---TCYNQEED--RKLLVGFLEDVMTTLSLSHAPLDSLK--ASFVELGANPAYHEL 937
Query: 902 VFNILWEMVVSSNIDMKINAANLLKVIVPYINAKVTSMQVLPALVTLGSDQNLNVKYASI 961
+ +LW VV ++ ++ AA + +++V +N + + +V+PAL+TL SD ++V+ ++I
Sbjct: 938 LLTVLWYGVVHTSALVRCTAARMFELLVKGVNETLVAQRVVPALITLSSDPEISVRISTI 997
Query: 962 DAFGAVAQHFKNDMIVDKIRVQMDAFLED----GSHEATVAVVRALAVAVPHTTERLRD- 1016
AFG + + +++++++Q+ +FLED H + +++ P+ R RD
Sbjct: 998 PAFGTIMETVTQKELLERVKMQLASFLEDPQYQDQHSLHMEIIKTFGRVGPNAEPRFRDE 1057
Query: 1017 YLLSKIFQLSAVPSSSSDVMRRRERANAFCESIRALDATELSATSVRDFLLPAIQNLLKD 1076
++L + +L+ + + +R + A E+ AL +S + + LP ++ L D
Sbjct: 1058 FVLPHLHKLALCNNQQTVESKRIDIATQLFEAYSALSCCFISEELMVNHFLPGLRCLRTD 1117
Query: 1077 ADSLDPAHKEALEIIMKDRSGGTLETISKVMGAHLGITSSVTSFFGGGVGEGLLGK 1132
+ L P H+ L ++K+ ++ +K +G G S S G L K
Sbjct: 1118 MEQLSPEHEVILSSMIKE---CEIKVENKGIGEAQGSISIAASLVGEDAKTKFLSK 1170
Score = 79.0 bits (193), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 102/209 (48%), Gaps = 42/209 (20%)
Query: 16 LLEEKYLLTAFELLQELLDDGRDAQAIRLKEFFSDPSHF------PPDL----------I 59
LL ++Y+LTA EL ELL+ GR+ RL+++FS+P +F PP +
Sbjct: 92 LLRDQYILTALELHTELLEAGRELP--RLRDYFSNPGNFERQSGTPPACKEQGVGPGGPL 149
Query: 60 TRFNSLRVADPQSLL----EEKEALVEKLAITEYELRLAQEDVTKLKAELKKKSDSSLEN 115
R S+ D + E++A+ E+ELR A+E + L+A L + ++ +
Sbjct: 150 NRAGSISTLDSLDFARYSDDGNRESDERVAVLEFELRKAKETIQALRANLTQAAECEIA- 208
Query: 116 LNESNENNHGNHGVEFQRQKRDISFSDLGPLKDIERKDLNCAVKEYLLLAGYRLTAMTFY 175
S E + E Q P++ +E++ LN V EYLL Y+LT++TF
Sbjct: 209 ---SQERKNYKSSPETQE-----------PIRPLEKRALNFLVNEYLLKNEYKLTSITFS 254
Query: 176 EEVTDQNLDIWQ----NTPARVPDALRHY 200
+E DQ+ ++W N P + PD L+ Y
Sbjct: 255 DENDDQDFELWDDVGLNIP-KPPDLLQLY 282
>sp|Q9P260|K1468_HUMAN LisH domain and HEAT repeat-containing protein KIAA1468 OS=Homo
sapiens GN=KIAA1468 PE=1 SV=2
Length = 1216
Score = 277 bits (709), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 199/676 (29%), Positives = 332/676 (49%), Gaps = 79/676 (11%)
Query: 463 ILADALPKIVPYVLINHREELLPLIMCAIERHPDTSTRDSLTHTLFNLIKRPDEKQRRII 522
+L LP IVP VL+ REEL+PLI+C HP+ RD L H LFNLIKRPD++QR++I
Sbjct: 522 MLGRCLPHIVPNVLLAKREELIPLILCTACLHPEPKERDQLLHILFNLIKRPDDEQRQMI 581
Query: 523 MDACVTLAKNVGEMRTEMELLPQCWEQINHMYEERRLLVAQSCGELAEFVRPEIRDSLIL 582
+ CV A++VG R E ELLPQCWEQINH Y ERRLLVA+SCG LA ++ EIR SL+L
Sbjct: 582 LTGCVAFARHVGPTRVEAELLPQCWEQINHKYPERRLLVAESCGALAPYLPKEIRSSLVL 641
Query: 583 SIVQQ-LVEDSATVVREAAARNLALLLPLFPNTDKYFKVEDLMFQLVCDPSGVVVETTFK 641
S++QQ L+ED A +VREA ++L +++ + DKY + +L+ + DPS VV T +
Sbjct: 642 SMLQQMLMEDKADLVREAVIKSLGIIMGYIDDPDKYHQGFELLLSALGDPSERVVSATHQ 701
Query: 642 ELLPAVINWGSKLDHILRVLLSYILSSAQRCPPLSGVEGSVESHLRVLGERERWNLEVLL 701
LPA W ++L ++ L+ +L+ ++ L E ++ H L + L
Sbjct: 702 VFLPAYAAWTTELGNLQSHLILTLLNKIEKL--LREGEHGLDEH----------KLHMYL 749
Query: 702 RMMAELLPFMQKNAIETCPFSS-------VSLSEETVFP-------------------SS 735
+ L+P + ++ PFSS V E T FP +
Sbjct: 750 SALQSLIPSLFALVLQNAPFSSKAKLHGEVPQIEVTRFPRPMSPLQDVSTIIGSREQLAV 809
Query: 736 LLELY-----AGGHIEWPAFEWMHVDCFPGLIQLACLLPEKEDNLRNRITKFLLAVSKQF 790
LL+LY G W + W+ P LI++ + + ++F + + F
Sbjct: 810 LLQLYDYQLEQEGTTGWESLLWVVNQLLPQLIEIVGKINVTSTACVHEFSRFFWRLCRTF 869
Query: 791 GDSYLTHIMLPVFMVAVGDNANLTFFPSTIHSGIRGLKPRTAVGERLATMGVLPLLLAGV 850
G + + P F L I S + G + T +P+ GV
Sbjct: 870 GKIFTNTKVKPQF------QEILRLSEENIDS---------SAGNGVLTKATVPIYATGV 914
Query: 851 LGAPSKHDQLADYLRKLLVEGTMKENHT-VKCNAEIVNAVRFLCTFEE------HHTMVF 903
L + + RKLLV G +++ T + + +++++ +F E +H ++
Sbjct: 915 LTCYIQEED-----RKLLV-GFLEDVMTLLSLSHAPLDSLK--ASFVELGANPAYHELLL 966
Query: 904 NILWEMVVSSNIDMKINAANLLKVIVPYINAKVTSMQVLPALVTLGSDQNLNVKYASIDA 963
+LW VV ++ ++ AA + ++ + ++ + +V PALVTL SD +V+ A+I A
Sbjct: 967 TVLWYGVVHTSALVRCTAARMFELTLRGMSEALVDKRVAPALVTLSSDPEFSVRIATIPA 1026
Query: 964 FGAVAQHFKNDMIVDKIRVQMDAFLED----GSHEATVAVVRALAVAVPHTTERLRD-YL 1018
FG + + +++++++Q+ +FLED H +++ P+ R RD ++
Sbjct: 1027 FGTIMETVIQRELLERVKMQLASFLEDPQYQDQHSLHTEIIKTFGRVGPNAEPRFRDEFV 1086
Query: 1019 LSKIFQLSAVPSSSSDVMRRRERANAFCESIRALDATELSATSVRDFLLPAIQNLLKDAD 1078
+ + +L+ V + +R + A E+ AL +S + + LP ++ L D +
Sbjct: 1087 IPHLHKLALVNNLQIVDSKRLDIATHLFEAYSALSCCFISEDLMVNHFLPGLRCLRTDME 1146
Query: 1079 SLDPAHKEALEIIMKD 1094
L P H+ L ++K+
Sbjct: 1147 HLSPEHEVILSSMIKE 1162
Score = 79.7 bits (195), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 105/227 (46%), Gaps = 61/227 (26%)
Query: 16 LLEEKYLLTAFELLQELLDDGRDAQAIRLKEFFSDPSHF------PPDL----------- 58
LL ++YLLTA EL ELL+ GR+ RL+++FS+P +F PP +
Sbjct: 101 LLRDQYLLTALELHTELLESGRELP--RLRDYFSNPGNFERQSGTPPGMGAPGVPGAAGV 158
Query: 59 ----------------ITRFNSLRVADPQSLL----EEKEALVEKLAITEYELRLAQEDV 98
+ R S+ D + EK+A+ E+ELR A+E +
Sbjct: 159 GGAGGREPSTASGGGQLNRAGSISTLDSLDFARYSDDGNRETDEKVAVLEFELRKAKETI 218
Query: 99 TKLKAELKKKSDSSLENLNESNENNHGNHGVEFQRQKRDISFSDLG-PLKDIERKDLNCA 157
L+A L K ++ H V Q +K S ++ P+K +E++ LN
Sbjct: 219 QALRANLTKAAE----------------HEVPLQERKNYKSSPEIQEPIKPLEKRALNFL 262
Query: 158 VKEYLLLAGYRLTAMTFYEEVTDQNLDIWQ----NTPARVPDALRHY 200
V E+LL Y+LT++TF +E DQ+ ++W N P + PD L+ Y
Sbjct: 263 VNEFLLKNNYKLTSITFSDENDDQDFELWDDVGLNIP-KPPDLLQLY 308
>sp|Q4QQT4|2AAB_RAT Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A
beta isoform OS=Rattus norvegicus GN=Ppp2r1b PE=2 SV=1
Length = 601
Score = 37.4 bits (85), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 41/83 (49%)
Query: 886 VNAVRFLCTFEEHHTMVFNILWEMVVSSNIDMKINAANLLKVIVPYINAKVTSMQVLPAL 945
+NA+ C E + I+ +M +++ N A L+ I P ++ +V P L
Sbjct: 517 INALSEACGKEITTKQMLPIVLKMAGDQVANVRFNVAKSLQKIGPILDTNALQGEVKPVL 576
Query: 946 VTLGSDQNLNVKYASIDAFGAVA 968
LG D++++VKY + +A +A
Sbjct: 577 QKLGQDEDMDVKYFAQEAISVLA 599
Score = 35.4 bits (80), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 48/107 (44%)
Query: 498 STRDSLTHTLFNLIKRPDEKQRRIIMDACVTLAKNVGEMRTEMELLPQCWEQINHMYEER 557
S + + NL + R + ++ACV++A+ + + E ++P +
Sbjct: 212 SVKTEIVPLFTNLASDEQDSVRLLAVEACVSIAQLLSQDDLEALVMPTLRQAAEDKSWRV 271
Query: 558 RLLVAQSCGELAEFVRPEIRDSLILSIVQQLVEDSATVVREAAARNL 604
R +VA EL + V P+I S ++ Q L+ D VR AAA +
Sbjct: 272 RYMVADKFSELQKAVGPKIALSDLIPAFQSLLRDCEAEVRAAAAHKV 318
>sp|Q7TNP2|2AAB_MOUSE Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A
beta isoform OS=Mus musculus GN=Ppp2r1b PE=1 SV=2
Length = 601
Score = 36.6 bits (83), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 41/83 (49%)
Query: 886 VNAVRFLCTFEEHHTMVFNILWEMVVSSNIDMKINAANLLKVIVPYINAKVTSMQVLPAL 945
+NA+ C E + I+ +M +++ N A L+ I P ++ +V P L
Sbjct: 517 INALSEACGKEITTKQMLPIVLKMAGDQVANVRFNVAKSLQKIGPILDTNALQGEVKPVL 576
Query: 946 VTLGSDQNLNVKYASIDAFGAVA 968
LG D++++VKY + +A +A
Sbjct: 577 QKLGQDEDMDVKYFAQEAISVLA 599
Score = 35.0 bits (79), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 48/107 (44%)
Query: 498 STRDSLTHTLFNLIKRPDEKQRRIIMDACVTLAKNVGEMRTEMELLPQCWEQINHMYEER 557
S + + NL + R + ++ACV++A+ + + E ++P +
Sbjct: 212 SVKTEIVPLFTNLASDEQDSVRLLAVEACVSIAQLLSQEDLEALVMPTLRQAAEDKSWRV 271
Query: 558 RLLVAQSCGELAEFVRPEIRDSLILSIVQQLVEDSATVVREAAARNL 604
R +VA EL + V P+I S ++ Q L+ D VR AAA +
Sbjct: 272 RYMVADKFSELQKAVGPKIALSDLIPAFQSLLRDCEAEVRAAAAHKV 318
>sp|Q8IID4|DYHC2_PLAF7 Dynein heavy chain-like protein PF11_0240 OS=Plasmodium falciparum
(isolate 3D7) GN=PF11_0240 PE=3 SV=1
Length = 5251
Score = 36.6 bits (83), Expect = 1.4, Method: Composition-based stats.
Identities = 30/109 (27%), Positives = 50/109 (45%), Gaps = 10/109 (9%)
Query: 319 QPVERYEEEIKSLLKEIERLRAKSTNASDSLGSVYSESMQTEEKVVEVD-EDKTVLAHPS 377
+ VE+ E+ K++ K E +A N D E +EKVVE + ED+ +
Sbjct: 4159 KAVEKNTEDEKAIEKNTEDEKAVEKNTEDEKAV---EQNTEDEKVVEENTEDEKAVEK-- 4213
Query: 378 VEVVNSEDAQSLATQTPDNNTAKQPNEVLQGESTSSLKENIASENSENV 426
N+ED +++ T D ++ E +GE + +EN+ E E V
Sbjct: 4214 ----NTEDEKAVEKNTEDEKVVEEKIEDEKGEEQKAEEENVGIEEVEKV 4258
>sp|P10716|CLC4F_RAT C-type lectin domain family 4 member F OS=Rattus norvegicus
GN=Clec4f PE=1 SV=1
Length = 550
Score = 35.8 bits (81), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 89/189 (47%), Gaps = 25/189 (13%)
Query: 213 EEKIAMLRENESLLKVNERLNHEKESLLKTKEISDGQISALTKSLEALHRDLKDKENLIL 272
EE A +++ + +LK L E ++L + E++ I +L LE + + L
Sbjct: 145 EEANADIQQAKDVLKGTGALASETQALRSSLEVASADIHSLRGDLEKANAMTSQTQGL-- 202
Query: 273 DLKKTTEHQRRELN-------DCTAEITALKMHIEGSHSV----RNFATTNGDVIQSQ-- 319
LK +T++ EL+ + +EI AL+ ++ S+ + +NF + D I ++
Sbjct: 203 -LKSSTDNTSAELHVLGRGLEEAQSEIQALRGSLQSSNDLGSRTQNFLQHSMDNISAEIQ 261
Query: 320 ----PVERYEEEIKSLLKEIERLRAKSTNASDSLGSVYSESMQTEEKVVEVDEDKTVLAH 375
++R EE+ SL K++E L A+ NA+ L E T+ + ++ T +
Sbjct: 262 AMRDGMQRAGEEMTSLKKDLETLTAQIQNANGHL-----EQTDTQIQGLKAQLKSTSSLN 316
Query: 376 PSVEVVNSE 384
+EVVN +
Sbjct: 317 SQIEVVNGK 325
>sp|P54613|2AAB_PIG Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A
beta isoform (Fragment) OS=Sus scrofa GN=PPP2R1B PE=2
SV=1
Length = 602
Score = 35.0 bits (79), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 21/83 (25%), Positives = 40/83 (48%)
Query: 886 VNAVRFLCTFEEHHTMVFNILWEMVVSSNIDMKINAANLLKVIVPYINAKVTSMQVLPAL 945
+N + C E + I+ +M +++ N A L+ I P ++ +V P L
Sbjct: 518 INVLSEACGQEITTKQMLPIVLKMAGDQVANVRFNVAKSLQKIGPILDTDALQEEVKPVL 577
Query: 946 VTLGSDQNLNVKYASIDAFGAVA 968
LG D++++VKY + +A +A
Sbjct: 578 QKLGQDEDMDVKYFAQEAISVLA 600
Score = 34.3 bits (77), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 48/107 (44%)
Query: 498 STRDSLTHTLFNLIKRPDEKQRRIIMDACVTLAKNVGEMRTEMELLPQCWEQINHMYEER 557
S + + NL + R + ++ACV++A+ + + E ++P +
Sbjct: 213 SVKSEIVPLFTNLASDEQDSVRLLAVEACVSIAQLLSQDDLEALVMPTLRQAAEDKSWRV 272
Query: 558 RLLVAQSCGELAEFVRPEIRDSLILSIVQQLVEDSATVVREAAARNL 604
R +VA EL V P+I + ++ Q L++D VR AAA +
Sbjct: 273 RYMVADKFSELQRAVGPKITLNDLIPAFQNLLKDCEAEVRAAAAHKV 319
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.132 0.370
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 414,208,069
Number of Sequences: 539616
Number of extensions: 17376336
Number of successful extensions: 79204
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 44
Number of HSP's successfully gapped in prelim test: 963
Number of HSP's that attempted gapping in prelim test: 76357
Number of HSP's gapped (non-prelim): 3398
length of query: 1188
length of database: 191,569,459
effective HSP length: 129
effective length of query: 1059
effective length of database: 121,958,995
effective search space: 129154575705
effective search space used: 129154575705
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 67 (30.4 bits)