Query 001019
Match_columns 1188
No_of_seqs 326 out of 1177
Neff 5.1
Searched_HMMs 29240
Date Mon Mar 25 06:47:23 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/001019.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/001019hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2ols_A Phosphoenolpyruvate syn 100.0 2.3E-36 7.9E-41 374.7 21.3 202 969-1174 2-243 (794)
2 1vbg_A Pyruvate,orthophosphate 100.0 8.5E-30 2.9E-34 316.8 7.7 198 970-1172 3-296 (876)
3 1kbl_A PPDK, pyruvate phosphat 99.9 1.4E-28 4.9E-33 305.7 4.7 196 971-1172 2-292 (873)
4 2x0s_A Pyruvate phosphate diki 99.9 7.4E-28 2.5E-32 301.9 9.9 198 970-1172 4-298 (913)
5 1h6z_A Pyruvate phosphate diki 99.9 3.1E-26 1.1E-30 284.4 6.3 200 969-1174 3-300 (913)
6 3t05_A Pyruvate kinase, PK; te 95.6 0.022 7.6E-07 69.2 8.7 93 837-935 502-596 (606)
7 2e28_A Pyruvate kinase, PK; al 94.9 0.019 6.4E-07 69.8 5.3 99 836-940 482-582 (587)
8 2c3v_A Alpha-amylase G-6; carb 94.1 0.12 4E-06 49.4 7.6 65 287-373 21-86 (102)
9 2ols_A Phosphoenolpyruvate syn 93.9 0.02 6.7E-07 72.0 2.6 100 836-942 364-468 (794)
10 1vbg_A Pyruvate,orthophosphate 93.6 0.037 1.2E-06 70.1 4.3 101 837-942 400-513 (876)
11 1kbl_A PPDK, pyruvate phosphat 93.4 0.038 1.3E-06 69.9 3.8 101 836-941 395-508 (873)
12 1h6z_A Pyruvate phosphate diki 93.3 0.075 2.6E-06 67.4 6.1 74 836-913 424-501 (913)
13 1zym_A Enzyme I; phosphotransf 92.6 0.071 2.4E-06 58.5 4.0 76 862-942 153-232 (258)
14 2laa_A Beta/alpha-amylase; SBD 91.1 0.97 3.3E-05 43.3 9.5 68 285-374 14-82 (104)
15 2c3v_A Alpha-amylase G-6; carb 89.5 0.73 2.5E-05 44.0 7.1 77 33-123 9-85 (102)
16 2x0s_A Pyruvate phosphate diki 88.2 0.28 9.4E-06 62.6 4.3 73 837-913 425-501 (913)
17 2wqd_A Phosphoenolpyruvate-pro 86.9 0.47 1.6E-05 57.5 5.1 76 862-942 155-234 (572)
18 2hwg_A Phosphoenolpyruvate-pro 86.0 0.46 1.6E-05 57.7 4.3 76 862-942 153-232 (575)
19 2laa_A Beta/alpha-amylase; SBD 82.0 3.5 0.00012 39.4 7.6 72 39-124 8-81 (104)
20 2la2_A Cecropin, papiliocin; a 24.1 20 0.00069 28.3 0.5 11 501-511 11-21 (38)
21 1ow5_A Serine/threonine-protei 23.5 14 0.00046 34.3 -0.6 57 538-607 14-71 (85)
No 1
>2ols_A Phosphoenolpyruvate synthase; MC structural genomics, PSI-2, protein structure initiative, M center for structural genomics, transferase; 2.40A {Neisseria meningitidis}
Probab=100.00 E-value=2.3e-36 Score=374.66 Aligned_cols=202 Identities=23% Similarity=0.356 Sum_probs=178.4
Q ss_pred cCcceeeCCCCCC---ccccHHhHHHHHhhhcCC-CCccCCCceEeCHHHHHHHHHhccchhHHHHHHHHHhhcCCCChH
Q 001019 969 RGKYAVSVEDFTP---DMVGAKSCNIKFLRERVP-SWIKIPTSVAIPFGAFETVLSENINKDIANKISRLYKFINGGDLS 1044 (1188)
Q Consensus 969 ~~~~vl~l~e~~~---~~VGgKAanL~~L~~~~p-~g~~VP~GfvIpf~af~~fL~~~~~~~L~~~I~~L~~~l~~~d~~ 1044 (1188)
++++|++|++.+. .++|||++||++|.+.++ .|+|||+|||||+++|++|++.+ ++.+.|......++..+..
T Consensus 2 ~~~~v~~~~~~~~~~~~~vGGK~anL~em~~~L~~~GlpVP~GF~Itt~a~~~fl~~~---~l~~~i~~~l~~l~~~~~~ 78 (794)
T 2ols_A 2 ADNYVIWFENLRMTDVERVGGKNASLGEMISQLTEKGVRVPGGFATTAEAYRAFLAHN---GLSERISAALAKLDVEDVA 78 (794)
T ss_dssp --CCEEEGGGCCGGGHHHHHHHHHHHHHHHHHHGGGTCCCCCEEEECHHHHHHHHTGG---GHHHHHHHHHHSCCTTSHH
T ss_pred CCCEEEECCcCChhhcccCCHHHHHHHHHHHHHhhCCCCCCCEEEECHHHHHHHHHhC---ChHHHHHHHHHhhcccCHH
Confidence 4678999998764 699999999999986433 69999999999999999999987 7888888777777777765
Q ss_pred HH----HHHHHHHHcCCCCHHHHHHHHHHH----------------HhcC-------CCCCCCC-------CHHHHHHHH
Q 001019 1045 KL----QEIQEAVLQMSAPLSLIYELKNKM----------------RSSG-------MPWPGDE-------GWNLAWRSI 1090 (1188)
Q Consensus 1045 ~L----~~IR~~I~~~~lP~el~~eL~~Av----------------RSSa-------~SfAG~~-------g~e~l~~AI 1090 (1188)
.| .++|++|+++++|+++.++|.+++ |||+ .||||+| +.+++++||
T Consensus 79 ~l~~~~~~ir~~I~~~~~p~~l~~~i~~a~~~l~~~~g~~~~~vaVRSSa~~EDl~~~sfAG~~~t~l~v~g~~~l~~Ai 158 (794)
T 2ols_A 79 ELARVGKEIRQWILDTPFPEQLDAEIEAAWNKMVADAGGADISVAVRSSATAEDLPDASFAGQQETFLNINGLDNVKEAM 158 (794)
T ss_dssp HHHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHTSSCCCCEEEEEEECC-------CCSCSCEEEEECSHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhccccccCceEEEecCCChhhhhhhhhhhhhhhhhcCCCHHHHHHHH
Confidence 54 789999999999999999998765 3453 3799998 599999999
Q ss_pred HHHHHhcCChHHHHHHHHcCCCCccccceeEEEEeeccc--eeEEEEecCCCCCCCCeEEEEEeccCCcccccCccCCCe
Q 001019 1091 KKVWASKWNERAFISCRKANLNHDNLCMAVLIQETICGD--YAFVIHTKNPLSGDNSEIYTEIVKGLGETLVGAYPGRAM 1168 (1188)
Q Consensus 1091 k~VWASlfs~RA~~YRr~~Gi~~~~v~MAVLVQeMV~ad--~SGVlfT~nP~tgd~~ei~Ieav~GLGE~LVsG~vGtpd 1168 (1188)
|+||||+||+||+.||+.+|++++++.|||+||+||+++ +|||+||+||.||+++.++|+++|||||.||+|.+ +||
T Consensus 159 k~v~aS~~s~RAi~YR~~~gi~~~~~~mAV~VQ~MV~~~~s~sGV~FT~dP~tG~~~~~~I~a~~GlGE~vV~G~~-tpd 237 (794)
T 2ols_A 159 HHVFASLYNDRAISYRVHKGFEHDIVALSAGVQRMVRSDSGASGVMFTLDTESGYDQVVFVTSSYGLGENVVQGAV-NPD 237 (794)
T ss_dssp HHHHHHTTCHHHHHHHHHHCC--CCCCEEEEEEECCCTTSSEEEEEESSCTTTCCCSEEEEEEEESCTHHHHHTSS-CCE
T ss_pred HHHHHhcCCHHHHHHHHHcCCChHHhCceEEEEEcccCCceeEEEEEeCCCCCCCCceEEEEeccCCCceeecCCc-CCc
Confidence 999999999999999999999999999999999999999 99999999999999999999999999999999999 999
Q ss_pred eEEEec
Q 001019 1169 SFVTKK 1174 (1188)
Q Consensus 1169 ~f~v~k 1174 (1188)
.|.++|
T Consensus 238 ~~~v~k 243 (794)
T 2ols_A 238 EFYVFK 243 (794)
T ss_dssp EEEEEH
T ss_pred EEEEec
Confidence 999998
No 2
>1vbg_A Pyruvate,orthophosphate dikinase; transferase, maize, riken structural genomics/proteomics INI RSGI, structural genomics; 2.30A {Zea mays} SCOP: c.1.12.2 c.8.1.1 d.142.1.5 PDB: 1vbh_A*
Probab=99.96 E-value=8.5e-30 Score=316.81 Aligned_cols=198 Identities=16% Similarity=0.150 Sum_probs=157.1
Q ss_pred CcceeeC----CCCC---CccccHHhHHHHHhhhcCCCCccCCCceEeCHHHHHHHHHhc--cchhHHHHHHHHHhhcC-
Q 001019 970 GKYAVSV----EDFT---PDMVGAKSCNIKFLRERVPSWIKIPTSVAIPFGAFETVLSEN--INKDIANKISRLYKFIN- 1039 (1188)
Q Consensus 970 ~~~vl~l----~e~~---~~~VGgKAanL~~L~~~~p~g~~VP~GfvIpf~af~~fL~~~--~~~~L~~~I~~L~~~l~- 1039 (1188)
.++|++| ++.+ ..++|||++||++|.+ .|+|||+|||||+++|++|++.+ ...++++.|....+.++
T Consensus 3 ~~~v~~f~~~~~~~~~~~~~~vGGKganL~em~~---~glpVP~GF~Itt~a~~~~~~~~~~~~~~l~~~i~~~l~~le~ 79 (876)
T 1vbg_A 3 KKRVFHFGKGKSEGNKTMKELLGGKGANLAEMAS---IGLSVPPGFTVSTEACQQYQDAGCALPAGLWAEIVDGLQWVEE 79 (876)
T ss_dssp CCSEEEEETTEESSCTTCTTTTHHHHHHHHHHHH---TTCCCCCEEEECHHHHHHHHHTTSCCCTTHHHHHHHHHHHHHH
T ss_pred CcEEEECCccccccCccccccCcHHHHHHHHHHH---CCCCCCCeEEECHHHHHHHHHhcccccHHHHHHHHHHHHHHHH
Confidence 4689999 6654 4799999999999998 89999999999999999999986 23356555543332221
Q ss_pred -----CCChH-------------HHHHHHHHHHcCCCCHHHHHHHHHH---------H----------------------
Q 001019 1040 -----GGDLS-------------KLQEIQEAVLQMSAPLSLIYELKNK---------M---------------------- 1070 (1188)
Q Consensus 1040 -----~~d~~-------------~L~~IR~~I~~~~lP~el~~eL~~A---------v---------------------- 1070 (1188)
.+|.+ ....++++|+++++|+++.++|..+ +
T Consensus 80 ~~~~~~gd~~~plllsvrs~a~~smpgm~~tIln~~lpd~~~~~l~~~~~~~fA~d~yrr~~q~~~~~~~~vr~~~f~~~ 159 (876)
T 1vbg_A 80 YMGATLGDPQRPLLLSVRSGAAVSMPGMMDTVLNLGLNDEVAAGLAAKSGERFAYDSFRRFLDMFGNVVMDIPRSLFEEK 159 (876)
T ss_dssp HHTCBTTCSSSBCCEEEECCCSSCCTTCCCCEEEETCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHTSCCCHHHHHHH
T ss_pred hhccccCCCcccccceecccccccchhHHHHHHcCCCCHHHHHHHHHhhccchHHHHHHHHHhhccceeeecChhhHHHH
Confidence 12211 1136788999999999999988852 2
Q ss_pred ------------HhcC---------CCCCCCC----C-------HHHHHHHHHHHHHhcCChHHHHHHHHcCCCCccccc
Q 001019 1071 ------------RSSG---------MPWPGDE----G-------WNLAWRSIKKVWASKWNERAFISCRKANLNHDNLCM 1118 (1188)
Q Consensus 1071 ------------RSSa---------~SfAG~~----g-------~e~l~~AIk~VWASlfs~RA~~YRr~~Gi~~~~v~M 1118 (1188)
|||+ .+|+|.| + +++|+.|||+||||+||+||+.||+.+|++++ ..|
T Consensus 160 ~~~~~~~~~v~~~ss~taEDl~~~~~sf~~~y~~~~g~~fp~d~~~qL~~Ai~~v~aS~~~~RAi~YR~~~gi~~~-~~~ 238 (876)
T 1vbg_A 160 LEHMKESKGLKNDTDLTASDLKELVGQYKEVYLSAKGEPFPSDPKKQLELAVLAVFNSWESPRAKKYRSINQITGL-RGT 238 (876)
T ss_dssp HHHHHHHHTCSSGGGCCHHHHHHHHHHHHHHHHHHHSSCCCCCHHHHHHHHHHHHHHHTTCHHHHHHHHTTTCCCC-CCC
T ss_pred HHHHHHhcCccccccCCHHHHHHHHHHHHHHHHHhcCCCCCCChHHHHHHHHHHHHhccCCHHHHHHHHhcCCCch-hCc
Confidence 2333 2455555 2 58999999999999999999999999999988 699
Q ss_pred eeEEEEeeccc-----eeEEEEecCCCCCCCCeEEEEEeccCCcccccCccCCCeeEEE
Q 001019 1119 AVLIQETICGD-----YAFVIHTKNPLSGDNSEIYTEIVKGLGETLVGAYPGRAMSFVT 1172 (1188)
Q Consensus 1119 AVLVQeMV~ad-----~SGVlfT~nP~tgd~~ei~Ieav~GLGE~LVsG~vGtpd~f~v 1172 (1188)
||+||+||.++ .|||+||+||.||+++..-..++.|+||.||+|.+ +|+.|.+
T Consensus 239 AV~VQ~MV~g~~g~~s~sGV~FT~nP~tG~~~~~g~~li~a~GE~VVsG~~-tPd~~~~ 296 (876)
T 1vbg_A 239 AVNVQCMVFGNMGNTSGTGVLFTRNPNTGEKKLYGEFLVNAQGEDVVAGIR-TPEDLDA 296 (876)
T ss_dssp CEEEEECCCSCSSTTCEEEEEESSCTTTCCSSCEEEEEESSCHHHHHHTSC-CCEETHH
T ss_pred eEEEEEeccCCCCCCeeEEEEEeCCCCCCCcccceEEEEecCchhhhcCCc-Ccchhhh
Confidence 99999999886 99999999999998764434467899999999999 9998864
No 3
>1kbl_A PPDK, pyruvate phosphate dikinase; transferase, phosphotransferase; 1.94A {Clostridium symbiosum} SCOP: c.1.12.2 c.8.1.1 d.142.1.5 PDB: 1kc7_A* 1dik_A 1ggo_A 1jde_A 2dik_A 2r82_A 2fm4_A
Probab=99.94 E-value=1.4e-28 Score=305.74 Aligned_cols=196 Identities=19% Similarity=0.297 Sum_probs=152.2
Q ss_pred cceeeCCCCCC---ccccHHhHHHHHhhhcCCCCccCCCceEeCHHHHHHHHHhcc--chhHHHHHHHHHhhc-------
Q 001019 971 KYAVSVEDFTP---DMVGAKSCNIKFLRERVPSWIKIPTSVAIPFGAFETVLSENI--NKDIANKISRLYKFI------- 1038 (1188)
Q Consensus 971 ~~vl~l~e~~~---~~VGgKAanL~~L~~~~p~g~~VP~GfvIpf~af~~fL~~~~--~~~L~~~I~~L~~~l------- 1038 (1188)
++|++|++.+. +++|||++||++|.+ .|+|||+||+||+++|++|++++. ..+++++|....+.+
T Consensus 2 ~~v~~f~~~~~~~~~~vGGKganL~em~~---~glpVP~GF~ITt~a~~~~~~~~~~~p~~l~~~i~~~l~~le~~~~~~ 78 (873)
T 1kbl_A 2 KWVYKFEEGNASMRNLLGGKGCNLAEMTI---LGMPIPQGFTVTTEACTEYYNSGKQITQEIQDQIFEAITWLEELNGKK 78 (873)
T ss_dssp CCEEEGGGCCGGGHHHHHHHHHHHHHHHH---TTCCCCCEEEECHHHHHHHHTTSSCCCHHHHHHHHHHHHHHHHHHTSC
T ss_pred CeEEECcCCChhhhhhCcHHHHHHHHHHh---CCCCCCCEEEEcHHHHHHHHHhcccccHHHHHHHHHHHHHHHHHhccc
Confidence 58999998765 689999999999998 899999999999999999998862 335666555433222
Q ss_pred -CC-CChH----------HHHHHHHHHHcCCCCHHHHHHHHH----------HHH-------------------------
Q 001019 1039 -NG-GDLS----------KLQEIQEAVLQMSAPLSLIYELKN----------KMR------------------------- 1071 (1188)
Q Consensus 1039 -~~-~d~~----------~L~~IR~~I~~~~lP~el~~eL~~----------AvR------------------------- 1071 (1188)
+. .++. ....++++|+++.+|+++.++|.. ++|
T Consensus 79 fg~~~~pl~lsvRS~a~~SmpGm~dtiLn~~l~d~~~~~l~~~~g~~~fa~d~yrr~~~~~~~v~~~v~~~~f~~~~~~~ 158 (873)
T 1kbl_A 79 FGDTEDPLLVSVRSGARASMPGMMDTILNLGLNDVAVEGFAKKTGNPRFAYDSYRRFIQMYSDVVMEVPKSHFEKIIDAM 158 (873)
T ss_dssp BTCSSSCBCEEEEEECSSCCTTSSCEEEEETCCTTHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHH
T ss_pred cCCCCCchhHHHhhccccccccHHHHHHcCCCCHHHHHHHHHhhCCchHHHHHHHHHHhccCCceeeccchhHHHHHHHH
Confidence 11 1110 113457778888999888888874 122
Q ss_pred ---------hcCC-----CC------------CCC-C---CHHHHHHHHHHHHHhcCChHHHHHHHHcCCCCccccceeE
Q 001019 1072 ---------SSGM-----PW------------PGD-E---GWNLAWRSIKKVWASKWNERAFISCRKANLNHDNLCMAVL 1121 (1188)
Q Consensus 1072 ---------SSa~-----Sf------------AG~-~---g~e~l~~AIk~VWASlfs~RA~~YRr~~Gi~~~~v~MAVL 1121 (1188)
|+++ +| .|. + ..++|+.|||+||||+||+||+.||+.+|++++ ..|||+
T Consensus 159 ~~~~~v~~ds~~taedl~~~~~~~~~~~~~~~~g~~fp~dp~eqL~~Aik~V~aS~~~~RAi~YR~~~gi~~~-~~~AV~ 237 (873)
T 1kbl_A 159 KEEKGVHFDTDLTADDLKELAEKFKAVYKEAMNGEEFPQEPKDQLMGAVKAVFRSWDNPRAIVYRRMNDIPGD-WGTAVN 237 (873)
T ss_dssp HHHTCCCSGGGCCHHHHHHHHHHHHHHHHTTTTTCCCCCCHHHHHHHHHHHHHHHTTSHHHHHHHHHTTCCGG-GCCEEE
T ss_pred HHhcCcCccCCCCHHHHHHHHHHHHHHHHHhhcCCCCCccHHHHHHHHHHHHHhccCCHHHHHHHHHcCCCch-hCceEE
Confidence 2211 11 121 1 168999999999999999999999999999987 699999
Q ss_pred EEEeeccc-----eeEEEEecCCCCCCCCeEEEE-EeccCCcccccCccCCCeeEEE
Q 001019 1122 IQETICGD-----YAFVIHTKNPLSGDNSEIYTE-IVKGLGETLVGAYPGRAMSFVT 1172 (1188)
Q Consensus 1122 VQeMV~ad-----~SGVlfT~nP~tgd~~ei~Ie-av~GLGE~LVsG~vGtpd~f~v 1172 (1188)
||+||.++ .|||+||+||.||+++ ++++ .+.|+||.||+|.+ +|+.|.+
T Consensus 238 VQ~MV~g~~~~~s~sGV~FT~nP~tG~~~-~~g~~li~a~GE~VV~G~~-tPd~~~~ 292 (873)
T 1kbl_A 238 VQTMVFGNKGETSGTGVAFTRNPSTGEKG-IYGEYLINAQGEDVVAGVR-TPQPITQ 292 (873)
T ss_dssp EEECCCTTSSTTCEEEEEEEECTTTCCEE-EEEEEEESCCHHHHHHTSS-CCEEGGG
T ss_pred EEEcccCCCCCceeEEEEEecCCCCCCcc-cceEEEecCCchhhhcCCc-Cchhhhh
Confidence 99999886 8999999999999864 4444 57899999999999 9998853
No 4
>2x0s_A Pyruvate phosphate dikinase; transferase, tropical parasite; 3.00A {Trypanosoma brucei}
Probab=99.94 E-value=7.4e-28 Score=301.90 Aligned_cols=198 Identities=21% Similarity=0.208 Sum_probs=146.7
Q ss_pred CcceeeCC----CCC---CccccHHhHHHHHhhhcCCCCccCCCceEeCHHHHHHHHHhcc-chhHHHHHHH----HHhh
Q 001019 970 GKYAVSVE----DFT---PDMVGAKSCNIKFLRERVPSWIKIPTSVAIPFGAFETVLSENI-NKDIANKISR----LYKF 1037 (1188)
Q Consensus 970 ~~~vl~l~----e~~---~~~VGgKAanL~~L~~~~p~g~~VP~GfvIpf~af~~fL~~~~-~~~L~~~I~~----L~~~ 1037 (1188)
.+||++|+ |.+ .++||||+|||++|.+ .|+|||+|||||+.+|++|++.+. .+.|.+.|.. +...
T Consensus 4 ~k~vy~F~~~~~e~~~~~~~LvGGKgAnLgEM~~---~GlpVP~GF~iTt~Ay~~fl~~~~l~~~i~~~l~~~l~~le~~ 80 (913)
T 2x0s_A 4 KKWVYYFGGGNADGNKNMKELLGGKGANLAEMVN---LGIPVPPGFTITTEACKTYQETETIPQEVADQVRENVSRVEKE 80 (913)
T ss_dssp CCCEEEECSSSCSSCTTCHHHHHHHHHHHHHHHH---TTCCCCCEEEECHHHHHHHHTSSCCCHHHHHHHHHHHHHHHHH
T ss_pred CcEEEECCCCCccCCcchhhhCcHHHHHHHHHHH---CcCCCCCCEeehHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHH
Confidence 47899995 333 3589999999999998 899999999999999999999863 3455555432 2111
Q ss_pred cC--CCChH--------------------H-----H--HHHHHHHHcCC-----------------------CCHH-HHH
Q 001019 1038 IN--GGDLS--------------------K-----L--QEIQEAVLQMS-----------------------APLS-LIY 1064 (1188)
Q Consensus 1038 l~--~~d~~--------------------~-----L--~~IR~~I~~~~-----------------------lP~e-l~~ 1064 (1188)
.. .+|.. . | +.++.++...+ ++.+ +..
T Consensus 81 ~~~~~gd~~~pLl~sVRsga~~smpgmmdtilnlgln~~~v~~l~~~~~~~~~~a~d~Yrr~~~~y~~~v~~v~~~~fe~ 160 (913)
T 2x0s_A 81 MGAKFGDPANPLLFSVRSGAAASMPGMMDTVLNLGLNKVTVDAWVRRAPRLERFVYDSYRRFITMYADIVMQVGREDFEE 160 (913)
T ss_dssp HSCBTTCTTSBCCEEEEEECSCCC----CEEEEETCCHHHHTTTSTTCTTSHHHHHHHHHHHHHHHHHHHHCCCSHHHHH
T ss_pred hhhhhCCccccchheecccccccCCccchhHHhccccHHHHHHHHHhCCCcHHHHHHHHHHHHHHHHHHhcCCChhhHHH
Confidence 10 00100 0 0 12222222222 2222 222
Q ss_pred HHHH--HHHhcCC-------CCCCCC------------------CHHHHHHHHHHHHHhcCChHHHHHHHHcCCCCcccc
Q 001019 1065 ELKN--KMRSSGM-------PWPGDE------------------GWNLAWRSIKKVWASKWNERAFISCRKANLNHDNLC 1117 (1188)
Q Consensus 1065 eL~~--AvRSSa~-------SfAG~~------------------g~e~l~~AIk~VWASlfs~RA~~YRr~~Gi~~~~v~ 1117 (1188)
.+.. +.|||+. ||||+. ..++|+.|||+||||+||+||+.||+.+|+++. +.
T Consensus 161 ~~~~~~~~rssa~~~dl~~as~a~~~~tyl~v~~~~~g~~fp~d~~~qL~~ai~~vfaSl~t~RAi~YR~~~g~~~~-~~ 239 (913)
T 2x0s_A 161 ALSRMKERRGTKFDTDLTASDLKELCDGYLELFELKTGCSFPQDPVMQLFAAIKAVFRSWGNPRATIYRRMNNITGL-LG 239 (913)
T ss_dssp HHHHHHHHHTCSCGGGCCHHHHHHHHHHHHHHHHHHSSSCCCCCHHHHHHHHHHHHHHHHHCHHHHTHHHHSCCCCC-CC
T ss_pred HHHHHHHhcCccccccCCHHHHHHHHHHHHHHHHHHhCCCCCcCHHHHHHHHHHHHHHHccCHHHHHHHHhcCCCcc-cc
Confidence 2221 2477763 466654 157999999999999999999999999999986 89
Q ss_pred ceeEEEEeeccc-----eeEEEEecCCCCCCCCeEEEEEeccCCcccccCccCCCeeEEE
Q 001019 1118 MAVLIQETICGD-----YAFVIHTKNPLSGDNSEIYTEIVKGLGETLVGAYPGRAMSFVT 1172 (1188)
Q Consensus 1118 MAVLVQeMV~ad-----~SGVlfT~nP~tgd~~ei~Ieav~GLGE~LVsG~vGtpd~f~v 1172 (1188)
+||.||.||.++ .|||+||+||.||++..+.+.+++||||.||+|.+ +||.|..
T Consensus 240 laV~VQ~MV~~~~~~~s~SGVmFT~dp~TG~~~~~~~~~~~glGE~VV~G~v-tPd~~~~ 298 (913)
T 2x0s_A 240 TAVNVQAMVFGNINDRSATGVAFSRSPSTGENFFFGEYLVNAQGEDVVAGIR-TPQQINH 298 (913)
T ss_dssp CEEEEEECCCSCSSTTCEEEEEESSCTTTCCSSCEEEEEESCCTTHHHHCSS-CCBCSSH
T ss_pred cceEEEEeeecccCccccceEEEecCCCCCCCcEEEEEccCCcCcccccCCC-CCccccc
Confidence 999999999876 78999999999999999999999999999999999 9999864
No 5
>1h6z_A Pyruvate phosphate dikinase; transferase, tropical parasite, trypanosome; 3.00A {Trypanosoma brucei} PDB: 2x0s_A
Probab=99.92 E-value=3.1e-26 Score=284.37 Aligned_cols=200 Identities=22% Similarity=0.273 Sum_probs=149.5
Q ss_pred cCcceeeCCC----CC---CccccHHhHHHHHhhhcCCCCccCCCceEeCHHHHHHHHHhc-cchhHHHHH----HHHHh
Q 001019 969 RGKYAVSVED----FT---PDMVGAKSCNIKFLRERVPSWIKIPTSVAIPFGAFETVLSEN-INKDIANKI----SRLYK 1036 (1188)
Q Consensus 969 ~~~~vl~l~e----~~---~~~VGgKAanL~~L~~~~p~g~~VP~GfvIpf~af~~fL~~~-~~~~L~~~I----~~L~~ 1036 (1188)
+.++|++|++ .+ .+++|||++||++|.+ .|+|||+||+|||++|++|++.+ ..++++++| ..|..
T Consensus 3 ~~k~v~~f~~~~~~~~~~~~~llGgKganL~em~~---lglpVPpGF~Itteac~~~~~~~~~~~~l~~~i~~~l~~le~ 79 (913)
T 1h6z_A 3 AKKWVYYFGGGNADGNKNMKELLGGKGANLAEMVN---LGIPVPPGFTITTEACKTYQETETIPQEVADQVRENVSRVEK 79 (913)
T ss_dssp CCCCEEEECSSSCSCCTTCHHHHHHHHHHHHHHHH---TTCCCCCEEEECHHHHTTTTTSSCCCHHHHHHHHHHHHHHHH
T ss_pred CCCEEEECCCCcccCChhhHhhcChHhhhHHHHHH---CCCCCCCcEEeeHHHHHHHHHcCCCcHHHHHHHHHHHHHHHH
Confidence 3578999987 33 3699999999999999 89999999999999999999765 223455444 33333
Q ss_pred hcC--CCChH-------------HHHHHHHHHHcCCCCHHHHHH-HHH----------HHHh----c-----CC---CC-
Q 001019 1037 FIN--GGDLS-------------KLQEIQEAVLQMSAPLSLIYE-LKN----------KMRS----S-----GM---PW- 1077 (1188)
Q Consensus 1037 ~l~--~~d~~-------------~L~~IR~~I~~~~lP~el~~e-L~~----------AvRS----S-----a~---Sf- 1077 (1188)
..+ .+|.+ ....++++|+++.++++.++. |.. ++|. . +. .|
T Consensus 80 ~~g~~fg~~~~PLLvsvrsga~~smpGmmdtilnlGlnd~~~~~~la~~~g~~~fa~d~Yrrfiq~~~~vv~~v~~~~fe 159 (913)
T 1h6z_A 80 EMGAKFGDPANPLLFSVRSGAAASMPGMMDTVLNLGLNKVTVDAWVRRAPRLERFVYDSYRRFITMYADIVMQVGREDFE 159 (913)
T ss_dssp HHCCBTTCTTSBCCEEEEESCTTC-----CCCCSBSCCHHHHHHHGGGCGGGHHHHHHHHHHHHHHHHHHHHCCCSTTTS
T ss_pred HhCcccCCCCCccceeeecccccccchHHHHHHhcCCCHHHHHHHHHHhcCChhHHHHHHHHHHHHhchhhcCCCHHHHH
Confidence 221 12211 125699999999999999998 621 2221 1 11 01
Q ss_pred -------------------------------------CCC-C---CHHHHHHHHHHHHHhcCChHHHHHHHHcCCCCccc
Q 001019 1078 -------------------------------------PGD-E---GWNLAWRSIKKVWASKWNERAFISCRKANLNHDNL 1116 (1188)
Q Consensus 1078 -------------------------------------AG~-~---g~e~l~~AIk~VWASlfs~RA~~YRr~~Gi~~~~v 1116 (1188)
.|. + ..++|+.||++||||+||+||+.||+.+|++++ .
T Consensus 160 ~~~~~~k~~~g~~~d~~~~a~dl~~~~~~yk~~~~~~~g~~fp~dp~eqL~~AI~~v~aS~~s~RAi~YR~~~gi~~~-~ 238 (913)
T 1h6z_A 160 EALSRMKERRGTKFDTDLTASDLKELCDGYLELFELKTGCSFPQDPVMQLFAAIKAVFRSWGNPRATIYRRMNNITGL-L 238 (913)
T ss_dssp TTTHHHHHHHSCSCGGGCCHHHHHHHHHTTHHHHHHHSSSCCCCCHHHHHHHHHHHHHHTTTCTTTTTHHHHSCCCSC-C
T ss_pred HHHHHHHHHcCCCcccCCCHHHHHHHHHHHHHHHHHHhCCCCCcCHHHHHHHHHHHHHHhcCcHHHHHHHHHcCCChh-h
Confidence 121 1 178999999999999999999999999999985 7
Q ss_pred cceeEEEEeeccc-----eeEEEEecCCCCCCCCeEEEEE-eccCCcccccCccCCCeeEEEec
Q 001019 1117 CMAVLIQETICGD-----YAFVIHTKNPLSGDNSEIYTEI-VKGLGETLVGAYPGRAMSFVTKK 1174 (1188)
Q Consensus 1117 ~MAVLVQeMV~ad-----~SGVlfT~nP~tgd~~ei~Iea-v~GLGE~LVsG~vGtpd~f~v~k 1174 (1188)
.|||+||+||.++ .|||+||+||.||++ .+++++ +.||||.||+|.+ +||.|++++
T Consensus 239 ~mAV~VQ~MV~g~~~~~s~SGV~FT~dP~TG~~-~~~ge~li~alGE~VVsG~v-tPd~~~v~~ 300 (913)
T 1h6z_A 239 GTAVNVQAMVFGNINDRSATGVAFSRSPSTGEN-FFFGEYLVNAQGEDVVAGIR-TPQQINHSL 300 (913)
T ss_dssp CCCEEEEECCCSCSSTTCEEEEEESSCSSSCCS-SCEEEEEESCCTTHHHHCCS-CCEESSHHH
T ss_pred cceEEEEEEeccCCCCcceeEEEEeCCCCCCCc-ceeeEEEEecCCchhccCCc-cCeEEEEec
Confidence 9999999999864 799999999999985 455554 4579999999999 999998754
No 6
>3t05_A Pyruvate kinase, PK; tetramer, glycolysis, transferase; 3.05A {Staphylococcus aureus subsp} PDB: 3t07_A* 3t0t_A*
Probab=95.57 E-value=0.022 Score=69.21 Aligned_cols=93 Identities=14% Similarity=0.163 Sum_probs=66.7
Q ss_pred EeeceeEEEEEEEecchhcccccccCCCeEEEEeCCCCcccCC--CCcEEEEcCCCCCcchhhhhhcccCCceEEEeech
Q 001019 837 VISPVEVCGFITSVNELITLQNKVYRRPTIIIASRITGEEEIP--VGVVAVLTPDMPDVLSHVSIRARNNKVCFATCFDQ 914 (1188)
Q Consensus 837 vispG~A~G~L~~V~~l~~v~~~~~~~P~Ill~~~~~GeEEIP--~gVaGVit~~~~d~LSHvaVRARn~gVp~atc~d~ 914 (1188)
.++||.+.|+++++.+..+.. .....+.||+++..+-. +++ ..+.||||..-. ..||.++.||++|||-+.--..
T Consensus 502 ~i~~G~v~G~v~vv~~~~da~-~~~~~g~ILVa~~l~Ps-~~~~l~~v~GiVte~Gg-~tSHaAIlAR~lgIPaVvG~~~ 578 (606)
T 3t05_A 502 GIGRGSVVGTTLVAETVKDLE-GKDLSDKVIVTNSIDET-FVPYVEKALGLITEENG-ITSPSAIVGLEKGIPTVVGVEK 578 (606)
T ss_dssp EESSCEEEEEEEECSSGGGGS-SSCCSSEEEEESCCCTT-THHHHTTSSEEEESSCC-SSSHHHHHHHHTTCCEEECCTT
T ss_pred ccccceEEEEEEEECChHHHh-hcCCCCeEEEECCCCHH-HHHHHHhhEEEEecCCC-cccHHHHHHhhCCCCEEEeccc
Confidence 378899999999999866632 12456789999854322 222 269999998776 8999999999999998765442
Q ss_pred HHHHHHHhcCCCeEEEEEcCC
Q 001019 915 NILRNLRLKEGKAVSIRLKST 935 (1188)
Q Consensus 915 ~~~~~l~~l~Gk~V~l~vss~ 935 (1188)
.... -.+|+.|.+....+
T Consensus 579 -a~~~--l~~G~~V~vDg~~G 596 (606)
T 3t05_A 579 -AVKN--ISNNVLVTIDAAQG 596 (606)
T ss_dssp -HHHH--SCSSCEEEEETTTT
T ss_pred -HHhh--CCCCCEEEEECCCC
Confidence 2222 24799888876543
No 7
>2e28_A Pyruvate kinase, PK; allosteric, transferase; 2.40A {Geobacillus stearothermophilus}
Probab=94.89 E-value=0.019 Score=69.75 Aligned_cols=99 Identities=11% Similarity=0.115 Sum_probs=69.6
Q ss_pred EEeeceeEEEEEEEecchhcccccccCCCeEEEEeCCCCcccCC--CCcEEEEcCCCCCcchhhhhhcccCCceEEEeec
Q 001019 836 QVISPVEVCGFITSVNELITLQNKVYRRPTIIIASRITGEEEIP--VGVVAVLTPDMPDVLSHVSIRARNNKVCFATCFD 913 (1188)
Q Consensus 836 qvispG~A~G~L~~V~~l~~v~~~~~~~P~Ill~~~~~GeEEIP--~gVaGVit~~~~d~LSHvaVRARn~gVp~atc~d 913 (1188)
..++||.+.|+++++.+..+.. .....|.||+++..+=++ +| ..+.||||..-. ..||.++.||++|||-+.--.
T Consensus 482 ~~~~~g~~~G~v~v~~~~~~~~-~~~~~g~ILVa~~l~Ps~-~~~l~~~~Givt~~Gg-~tSHaAIlAR~lgIPaVvG~~ 558 (587)
T 2e28_A 482 QGIGRKSAFGKAVVAKTAEEAR-QKMVDGGILVTVSTDADM-MPAIEKAAAIITEEGG-LTSHAAVVGLSLGIPVIVGVE 558 (587)
T ss_dssp EEESSCEECCBEEECSSHHHHH-HHCCTTCEEEESCCCGGG-HHHHTTCSEEEESSCC-TTSHHHHHHHHHTCCEEECCT
T ss_pred ccccCCeEEeeEEEeCCHHHHh-hcCCCCeEEEECCCCHHH-HHHHHhcEEEEEcCCC-CcCHHHHHHHHcCCCEEEecc
Confidence 5579999999999998755421 123567899998543222 22 279999998665 899999999999999776443
Q ss_pred hHHHHHHHhcCCCeEEEEEcCCceEEe
Q 001019 914 QNILRNLRLKEGKAVSIRLKSTNLIIS 940 (1188)
Q Consensus 914 ~~~~~~l~~l~Gk~V~l~vss~~v~l~ 940 (1188)
. ....+ .+|+.|.+....+.|.+.
T Consensus 559 ~-~~~~l--~~G~~v~vDg~~G~V~~~ 582 (587)
T 2e28_A 559 N-ATTLF--KDGQEITVDGGFGAVYRG 582 (587)
T ss_dssp T-HHHHS--CTTCBEEEETTTTEEEES
T ss_pred c-HHHhC--CCCCEEEEECCCCEEEEc
Confidence 2 33322 469999887665545443
No 8
>2c3v_A Alpha-amylase G-6; carbohydrate-binding module, starch binding, carbohydrate binding, glycoside hydrolase, amylose, amylopectin; HET: TYI; 1.39A {Bacillus halodurans} PDB: 2c3v_B* 2c3w_A* 2c3x_A*
Probab=94.08 E-value=0.12 Score=49.43 Aligned_cols=65 Identities=18% Similarity=0.424 Sum_probs=46.2
Q ss_pred CCeEEEeeeecCCCCcccCCCCCCCCCccccccceeeeeeecccCCCceeeEEEEEccCCceeEEEEEEecC-CcccccC
Q 001019 287 GAAILHWGISKCSPGEWLSPPPDMLPEKSKMVAGACQTYFTDIATARGSFQMVDVNLQKRKFVGIQFVIWSG-GSWIKNN 365 (1188)
Q Consensus 287 ~~lvLHWGv~~~~~~eW~~PP~~~~P~~S~~~~~A~eT~f~~~~~~~~~~~~lei~l~~d~~~gi~FVLk~~-~~W~kn~ 365 (1188)
...-|||++ +.+.|..+|. .+|.+... .+ +...+|+++.. ..|.||++++ ++|-+|+
T Consensus 21 ~~~ylHy~~---~~g~Wt~vpg---------------v~M~~~~~-~G-w~~~TI~~~~~--~~l~~~F~dG~~~WDNN~ 78 (102)
T 2c3v_A 21 THPHIHYSL---NQGAWTTLPG---------------VPLTKSEX-EG-XVKVTIEAEEG--SQLRAAFNNGSGQWDNNQ 78 (102)
T ss_dssp SSCEEEEEE---TTCCBCCTTC---------------EECEECSS-TT-EEEEEECCCTT--CEEEEEEECSSSCEECGG
T ss_pred CcEEEEEeC---CCCCcccCCC---------------cCcccccc-CC-ceEEEEecCCC--ceEEEEEeCCCcccccCC
Confidence 357799995 4479999988 34433211 12 34567777533 5899999997 7999999
Q ss_pred CcceEEec
Q 001019 366 GENFFVGL 373 (1188)
Q Consensus 366 G~DF~Vpl 373 (1188)
|.||.++-
T Consensus 79 g~Ny~~~~ 86 (102)
T 2c3v_A 79 GRDYDFSS 86 (102)
T ss_dssp GTCEEEES
T ss_pred CcceEECC
Confidence 99999964
No 9
>2ols_A Phosphoenolpyruvate synthase; MC structural genomics, PSI-2, protein structure initiative, M center for structural genomics, transferase; 2.40A {Neisseria meningitidis}
Probab=93.93 E-value=0.02 Score=71.98 Aligned_cols=100 Identities=13% Similarity=0.110 Sum_probs=56.7
Q ss_pred EEeeceeEEEEEEEecchhcccccccCCCeEEEEeCCCCcccCC--CCcEEEEcCCCCCcchhhhhhcccCCceEEEeec
Q 001019 836 QVISPVEVCGFITSVNELITLQNKVYRRPTIIIASRITGEEEIP--VGVVAVLTPDMPDVLSHVSIRARNNKVCFATCFD 913 (1188)
Q Consensus 836 qvispG~A~G~L~~V~~l~~v~~~~~~~P~Ill~~~~~GeEEIP--~gVaGVit~~~~d~LSHvaVRARn~gVp~atc~d 913 (1188)
..++||.+.|++++|.+.++.. ....+.|||++.++= +++| ..+.||||..-. ..||.+|.||++|||-+.--.
T Consensus 364 ~~~~~g~~~G~v~~~~~~~~~~--~~~~g~ILv~~~~~p-~~~~~~~~~~givt~~Gg-~tSHaAivar~~giP~vvg~~ 439 (794)
T 2ols_A 364 RAIGQKVGQGKVRLIKDASEMD--SVEAGDVLVTDMTDP-DWEPVMKRASAIVTNRGG-RTCHAAIIARELGIPAVVGCG 439 (794)
T ss_dssp BC--CCCCCBCBC----------------CEEEESCCCG-GGSHHHHTCSEEEESSCC-TTCHHHHHTTC---CEEECCT
T ss_pred cccCCCcceEEEEEecCHHHHH--hcCCCeEEEECCCCH-HHHHHHhhCcEEEEcCCC-cccHHHHHHhHCCCCEEEcCc
Confidence 3469999999998887765532 234567988885433 3455 279999998755 899999999999999776443
Q ss_pred hHHHHHHHhcCCCeEEE---EEcCCceEEeec
Q 001019 914 QNILRNLRLKEGKAVSI---RLKSTNLIISDI 942 (1188)
Q Consensus 914 ~~~~~~l~~l~Gk~V~l---~vss~~v~l~~~ 942 (1188)
. ....+ .+|+.|.+ ..+.+.|...+.
T Consensus 440 ~-~~~~~--~~G~~v~v~c~Dg~~G~v~~g~~ 468 (794)
T 2ols_A 440 N-ATELL--KNGQEVTVSCAEGDTGFIYAGLL 468 (794)
T ss_dssp T-HHHHS--CSSCCEECCCC--CCCBCEECC-
T ss_pred c-hhhcc--cCCCEEEEEecCCCcceEEeCCc
Confidence 2 33322 47999999 666655665543
No 10
>1vbg_A Pyruvate,orthophosphate dikinase; transferase, maize, riken structural genomics/proteomics INI RSGI, structural genomics; 2.30A {Zea mays} SCOP: c.1.12.2 c.8.1.1 d.142.1.5 PDB: 1vbh_A*
Probab=93.65 E-value=0.037 Score=70.11 Aligned_cols=101 Identities=19% Similarity=0.274 Sum_probs=64.7
Q ss_pred EeeceeEEEEEEEecchhcccc-cccCCCeEEEEeCCCCcccCCC--CcEEEEcCCCCCcchhhhhhcccCCceEEE-ee
Q 001019 837 VISPVEVCGFITSVNELITLQN-KVYRRPTIIIASRITGEEEIPV--GVVAVLTPDMPDVLSHVSIRARNNKVCFAT-CF 912 (1188)
Q Consensus 837 vispG~A~G~L~~V~~l~~v~~-~~~~~P~Ill~~~~~GeEEIP~--gVaGVit~~~~d~LSHvaVRARn~gVp~at-c~ 912 (1188)
.++||.+.|++++ ..++... ....+|.|||+..++ -+++|. .+.||||..-. ..||.+|.||++|||-+. |.
T Consensus 400 ~as~G~a~G~vv~--~~~~~~~~~~~g~~~ILV~~~t~-P~~~~~~~~a~GivT~~GG-~tSHaAIvAR~lGiP~VvG~~ 475 (876)
T 1vbg_A 400 PASPGAAVGQVVF--TAEDAEAWHSQGKAAILVRAETS-PEDVGGMHAAVGILTERGG-MTSHAAVVARGWGKCCVSGCS 475 (876)
T ss_dssp EEECSEEEEEEES--SHHHHHHHHHTTCCEEEEESCCC-TTSHHHHHHSSEEEESSCC-TTSHHHHHHHHTTCCEEECCT
T ss_pred ccCCCeEEEEEEE--CHHHHHHHhhccCCEEEEEcCCC-HHHHHhHhhccEEEECCCC-CccHHHHHHhHcCCCEEEcCC
Confidence 4699999999754 2222111 123457899988532 222331 48899998766 899999999999999876 44
Q ss_pred chHHHH--------HHH-hcCCCeEEEEEcCCceEEeec
Q 001019 913 DQNILR--------NLR-LKEGKAVSIRLKSTNLIISDI 942 (1188)
Q Consensus 913 d~~~~~--------~l~-~l~Gk~V~l~vss~~v~l~~~ 942 (1188)
+. .++ ... -.+|..|.+.-+.+.|.+.+.
T Consensus 476 ~~-~~~~~~~~~~~~~~~l~~G~~vtvDG~~G~V~~g~~ 513 (876)
T 1vbg_A 476 GI-RVNDAEKLVTIGGHVLREGEWLSLNGSTGEVILGKQ 513 (876)
T ss_dssp TE-EEEGGGTEEEETTEEEETTCEEEEETTTTEEEESCC
T ss_pred Cc-eeccccceEEeCCeeecCCCEEEEECCCCEEEECCC
Confidence 32 111 011 236888888777666666543
No 11
>1kbl_A PPDK, pyruvate phosphate dikinase; transferase, phosphotransferase; 1.94A {Clostridium symbiosum} SCOP: c.1.12.2 c.8.1.1 d.142.1.5 PDB: 1kc7_A* 1dik_A 1ggo_A 1jde_A 2dik_A 2r82_A 2fm4_A
Probab=93.38 E-value=0.038 Score=69.93 Aligned_cols=101 Identities=18% Similarity=0.205 Sum_probs=64.6
Q ss_pred EEeeceeEEEEEEEecchhcccc-cccCCCeEEEEeCCCCcccCCC--CcEEEEcCCCCCcchhhhhhcccCCceEEE-e
Q 001019 836 QVISPVEVCGFITSVNELITLQN-KVYRRPTIIIASRITGEEEIPV--GVVAVLTPDMPDVLSHVSIRARNNKVCFAT-C 911 (1188)
Q Consensus 836 qvispG~A~G~L~~V~~l~~v~~-~~~~~P~Ill~~~~~GeEEIP~--gVaGVit~~~~d~LSHvaVRARn~gVp~at-c 911 (1188)
..++||.+.|++++ ..++... ....+|.|||...+ .-+++|. .+.||||..-. ..||.+|.||++|||-+. |
T Consensus 395 ~~as~G~a~G~vv~--~~~~a~~~~~~g~~~ILV~~~t-~P~~~~~~~~a~GivT~~GG-~tSHaAIvAR~lGiP~VvG~ 470 (873)
T 1kbl_A 395 LPASPGAAAGKVYF--TADEAKAAHEKGERVILVRLET-SPEDIEGMHAAEGILTVRGG-MTSHAAVVARGMGTCCVSGC 470 (873)
T ss_dssp EEEECSEEEEEEES--SHHHHHHHHHTTCCEEEEESSC-CGGGHHHHHHCSEEEESSCC-TTSHHHHHHHHHTCEEEECC
T ss_pred ccccCceEEEEEEE--cHHHHHHhhccCCCEEEEECCC-CHHHHHHHHhccEEEecCCC-CccHHHHHHhHcCCCEEEcC
Confidence 34799999999854 2222111 12345779988853 2223332 48899998766 899999999999999876 4
Q ss_pred echHHHH--------HHH-hcCCCeEEEEEcCCceEEee
Q 001019 912 FDQNILR--------NLR-LKEGKAVSIRLKSTNLIISD 941 (1188)
Q Consensus 912 ~d~~~~~--------~l~-~l~Gk~V~l~vss~~v~l~~ 941 (1188)
.+. .++ ... -.+|..|.+.-+.+.|.+.+
T Consensus 471 ~~~-~i~~~~~~~~~~~~~l~~G~~vtvDG~~G~V~~g~ 508 (873)
T 1kbl_A 471 GEI-KINEEAKTFELGGHTFAEGDYISLDGSTGKIYKGD 508 (873)
T ss_dssp TTC-EEETTTTEEEETTEEEETTCEEEEETTTCEEEESC
T ss_pred CCc-eecccccEEEeCCeeecCCCEEEEECCCCEEEECC
Confidence 432 111 011 23688888877665566554
No 12
>1h6z_A Pyruvate phosphate dikinase; transferase, tropical parasite, trypanosome; 3.00A {Trypanosoma brucei} PDB: 2x0s_A
Probab=93.26 E-value=0.075 Score=67.41 Aligned_cols=74 Identities=19% Similarity=0.266 Sum_probs=52.4
Q ss_pred EEeeceeEEEEEEEecchhccccc-ccCCCeEEEEeCCCCcccCCC--CcEEEEcCCCCCcchhhhhhcccCCceEEE-e
Q 001019 836 QVISPVEVCGFITSVNELITLQNK-VYRRPTIIIASRITGEEEIPV--GVVAVLTPDMPDVLSHVSIRARNNKVCFAT-C 911 (1188)
Q Consensus 836 qvispG~A~G~L~~V~~l~~v~~~-~~~~P~Ill~~~~~GeEEIP~--gVaGVit~~~~d~LSHvaVRARn~gVp~at-c 911 (1188)
...+||.|+|++++ ..++.... ...+|.|||+...+ -+++|. .+.||||..-+ ..||.+|.||++|||-+. |
T Consensus 424 ~~aspG~a~G~v~~--~~~~a~~~~~~ge~~ILV~~~t~-P~d~~~m~~a~GIvT~~GG-~TSHaAIvAR~lGiPaVvG~ 499 (913)
T 1h6z_A 424 LAASPGAAVGQVVF--DAESAKEWSGRGKKVIMVRLETS-PEDLAGMDAACGILTARGG-MTSHAAVVARGMGKCCVSGC 499 (913)
T ss_dssp EEEESCEEEEEEES--SHHHHHSTTTTSCCEEEEESSCC-GGGCTTTTTSSEEEESSCC-TTCHHHHHHHHTTCCEEECC
T ss_pred eecCCceEEEEEEE--CHHHHHHHHhcCCCEEEEECCCC-HHHHHhHHhceEEEEcCCC-cccHHHHHHHhcCCCEEECC
Confidence 34799999999764 22222211 23557799887543 445663 68999998776 889999999999999776 4
Q ss_pred ec
Q 001019 912 FD 913 (1188)
Q Consensus 912 ~d 913 (1188)
.+
T Consensus 500 ~~ 501 (913)
T 1h6z_A 500 GD 501 (913)
T ss_dssp TT
T ss_pred cc
Confidence 44
No 13
>1zym_A Enzyme I; phosphotransferase; 2.50A {Escherichia coli} SCOP: a.60.10.1 c.8.1.2 PDB: 1eza_A 1ezb_A 1ezc_A 1ezd_A 2eza_A 2ezb_A 2ezc_A 3ezb_A 3eze_A 3eza_A
Probab=92.55 E-value=0.071 Score=58.51 Aligned_cols=76 Identities=17% Similarity=0.189 Sum_probs=51.6
Q ss_pred CCCeEEEEeCCCCcccCC----CCcEEEEcCCCCCcchhhhhhcccCCceEEEeechHHHHHHHhcCCCeEEEEEcCCce
Q 001019 862 RRPTIIIASRITGEEEIP----VGVVAVLTPDMPDVLSHVSIRARNNKVCFATCFDQNILRNLRLKEGKAVSIRLKSTNL 937 (1188)
Q Consensus 862 ~~P~Ill~~~~~GeEEIP----~gVaGVit~~~~d~LSHvaVRARn~gVp~atc~d~~~~~~l~~l~Gk~V~l~vss~~v 937 (1188)
..|.|||++..+= .+++ ..+.||||..-. ..||.++.||++|||-+.--.. ....+ .+|..|.+....+.|
T Consensus 153 ~~~~ILVa~~l~P-s~~~~l~~~~~~givt~~Gg-~tSH~AIlAR~lgIPavvg~~~-~~~~~--~~G~~v~vDg~~G~v 227 (258)
T 1zym_A 153 QDEVILVAADLTP-SETAQLNLKKVLGFITDAGG-RTSHTSIMARSLELPAIVGTGS-VTSQV--KNDDYLILDAVNNQV 227 (258)
T ss_dssp CSCEEEECSCCCH-HHHHHSCGGGEEEEECSCCC-SSSHHHHHHHHHTCCEECCCSC-HHHHC--CTTCEEEECCSSCCE
T ss_pred CCCeEEEECCCCH-HHHHhhchhhcEEEEEcCCC-cccHHHHHHHHcCCCEEEechh-HHHhC--CCCCEEEEECCCCeE
Confidence 4577888874211 1111 159999997555 8999999999999997753321 33322 469999988777667
Q ss_pred EEeec
Q 001019 938 IISDI 942 (1188)
Q Consensus 938 ~l~~~ 942 (1188)
.+.+.
T Consensus 228 ~~~p~ 232 (258)
T 1zym_A 228 YVNPT 232 (258)
T ss_dssp EESCC
T ss_pred EECcC
Confidence 77653
No 14
>2laa_A Beta/alpha-amylase; SBD, CBM25, hydrolase; NMR {Paenibacillus polymyxa} PDB: 2lab_A
Probab=91.12 E-value=0.97 Score=43.28 Aligned_cols=68 Identities=18% Similarity=0.399 Sum_probs=47.5
Q ss_pred CCCCeEEEeeeecCCCCcccCCCCCCCCCccccccceeeeeeecccCCCceeeEEEEEccCCceeEEEEEEecC-Ccccc
Q 001019 285 MKGAAILHWGISKCSPGEWLSPPPDMLPEKSKMVAGACQTYFTDIATARGSFQMVDVNLQKRKFVGIQFVIWSG-GSWIK 363 (1188)
Q Consensus 285 ~~~~lvLHWGv~~~~~~eW~~PP~~~~P~~S~~~~~A~eT~f~~~~~~~~~~~~lei~l~~d~~~gi~FVLk~~-~~W~k 363 (1188)
--..+-|||+. +.+.|..+|. .+|.+..- .+ +...+|+|+.. ..|.||++++ ++|-+
T Consensus 14 g~~~vylHyg~---~~g~Wt~~~~---------------v~M~~~~~-~g-w~~~TI~l~~g--~~~~~~F~dG~~~WDN 71 (104)
T 2laa_A 14 GFNSPYIHYRP---AGGSWTAAPG---------------VKMQDAEI-SG-YAKITVDIGSA--SQLEAAFNDGNNNWDS 71 (104)
T ss_dssp SSSSCEEEEEE---TTSCCCSSSC---------------EECEEETT-TT-EEEEEEECTTC--SCEEEEEECSSSCEES
T ss_pred CCCcEEEEEcC---CCCCCCcCCc---------------cccccccC-CC-eEEEEEECCCC--CEEEEEEeCCCCcCcC
Confidence 34568999993 4479999887 23332221 12 44467777543 5789999997 69999
Q ss_pred cCCcceEEecC
Q 001019 364 NNGENFFVGLH 374 (1188)
Q Consensus 364 n~G~DF~Vpl~ 374 (1188)
|+|+||.++..
T Consensus 72 n~g~Nyt~~~g 82 (104)
T 2laa_A 72 NNTKNYSFSTG 82 (104)
T ss_dssp TTTSCEEECSE
T ss_pred CCCccEEecCC
Confidence 99999999764
No 15
>2c3v_A Alpha-amylase G-6; carbohydrate-binding module, starch binding, carbohydrate binding, glycoside hydrolase, amylose, amylopectin; HET: TYI; 1.39A {Bacillus halodurans} PDB: 2c3v_B* 2c3w_A* 2c3x_A*
Probab=89.51 E-value=0.73 Score=43.99 Aligned_cols=77 Identities=10% Similarity=0.245 Sum_probs=49.9
Q ss_pred CceEEEEEEEeecCCceEEEeeeeecCCCccccCCCCCCCcccccccccccccEEEEEEecCCcceeEEEEEEecccccc
Q 001019 33 GRNVRVQFQLRNCARTWILHWGFLYRGNTNWFIPAEHPKQGALQTPFVKSGEIYLVTIELRDPKIHAIEFILKDGIHDRW 112 (1188)
Q Consensus 33 g~~~~v~~~~~n~~~~l~lHWGv~~~~~~~W~~P~~~Pk~~A~~Tpf~~~g~~~~v~ie~~d~~i~ai~Fvl~de~~~~W 112 (1188)
|..+.|-.. ......-|||| .+.+.|..+|.-+ |.+.+....++..|+-+.-..++|+|+|.. +.|
T Consensus 9 g~~vTvyY~--sg~~~~ylHy~---~~~g~Wt~vpgv~--------M~~~~~~Gw~~~TI~~~~~~~l~~~F~dG~-~~W 74 (102)
T 2c3v_A 9 ATDITIYYK--TGWTHPHIHYS---LNQGAWTTLPGVP--------LTKSEXEGXVKVTIEAEEGSQLRAAFNNGS-GQW 74 (102)
T ss_dssp CCSEEEEEE--CCCSSCEEEEE---ETTCCBCCTTCEE--------CEECSSTTEEEEEECCCTTCEEEEEEECSS-SCE
T ss_pred CCEEEEEEc--CCCCcEEEEEe---CCCCCcccCCCcC--------ccccccCCceEEEEecCCCceEEEEEeCCC-ccc
Confidence 444444444 55677889999 3447998877633 222211112223344344489999999987 899
Q ss_pred ccccCCccccc
Q 001019 113 LRLNHGNFRIE 123 (1188)
Q Consensus 113 ~k~~g~nf~v~ 123 (1188)
-.++|+||.+.
T Consensus 75 DNN~g~Ny~~~ 85 (102)
T 2c3v_A 75 DNNQGRDYDFS 85 (102)
T ss_dssp ECGGGTCEEEE
T ss_pred ccCCCcceEEC
Confidence 99999999986
No 16
>2x0s_A Pyruvate phosphate dikinase; transferase, tropical parasite; 3.00A {Trypanosoma brucei}
Probab=88.20 E-value=0.28 Score=62.63 Aligned_cols=73 Identities=19% Similarity=0.260 Sum_probs=49.9
Q ss_pred EeeceeEEEEEEEe-cchhcccccccCCCeEEEEeCCCCcccCCC--CcEEEEcCCCCCcchhhhhhcccCCceEEE-ee
Q 001019 837 VISPVEVCGFITSV-NELITLQNKVYRRPTIIIASRITGEEEIPV--GVVAVLTPDMPDVLSHVSIRARNNKVCFAT-CF 912 (1188)
Q Consensus 837 vispG~A~G~L~~V-~~l~~v~~~~~~~P~Ill~~~~~GeEEIP~--gVaGVit~~~~d~LSHvaVRARn~gVp~at-c~ 912 (1188)
..+||.|+|++++. ++..+.. ...++.|||.+.++ -+++|. ...||||..=+ .-||.+|.||.+|||-+. |.
T Consensus 425 ~aspG~a~G~v~~~~~~~~~~~--~~~~g~ILV~~~T~-Pd~~p~M~~a~gIvT~~GG-~TSHAAIvAR~LGIPaVVG~~ 500 (913)
T 2x0s_A 425 AASPGAAVGQVVFDAESAKEWS--GRGKKVIMVRLETS-PEDLAGMDAACGILTARGG-MTSHAAVVARGMGKCCVSGCG 500 (913)
T ss_dssp EEESSEEEEEEESSHHHHHHHT--TTTCCEEEEESSCC-TTSHHHHTTSSEEEESSCC-TTCHHHHHHHTTTCCEEECCT
T ss_pred ccCCccceeeEEechhHHHHHh--hCCCceEEEcCCCC-HHHHHHHHHHHHHHHHccC-CCChHHHHHHHcCCCeecCcc
Confidence 46999999998653 2322221 12345677776443 233442 58899998766 789999999999999885 44
Q ss_pred c
Q 001019 913 D 913 (1188)
Q Consensus 913 d 913 (1188)
+
T Consensus 501 ~ 501 (913)
T 2x0s_A 501 D 501 (913)
T ss_dssp T
T ss_pred h
Confidence 4
No 17
>2wqd_A Phosphoenolpyruvate-protein phosphotransferase; kinase, cytoplasm, transport, magnesium, PEP- utilising enzyme, phosphotransferase system; 2.40A {Staphylococcus aureus} PDB: 2hro_A
Probab=86.93 E-value=0.47 Score=57.54 Aligned_cols=76 Identities=14% Similarity=0.136 Sum_probs=53.0
Q ss_pred CCCeEEEEeCCCCcccCCC----CcEEEEcCCCCCcchhhhhhcccCCceEEEeechHHHHHHHhcCCCeEEEEEcCCce
Q 001019 862 RRPTIIIASRITGEEEIPV----GVVAVLTPDMPDVLSHVSIRARNNKVCFATCFDQNILRNLRLKEGKAVSIRLKSTNL 937 (1188)
Q Consensus 862 ~~P~Ill~~~~~GeEEIP~----gVaGVit~~~~d~LSHvaVRARn~gVp~atc~d~~~~~~l~~l~Gk~V~l~vss~~v 937 (1188)
..|.|||++..+= ++++. .+.||||..-. ..||.+|.||++|||-+.--.. ....+ .+|..|.+.-..+.|
T Consensus 155 ~~~~ILVa~~l~P-~~~~~l~~~~~~Givt~~Gg-~tSHaAIvAR~lgIPaVvg~~~-~~~~~--~~G~~v~vDg~~G~V 229 (572)
T 2wqd_A 155 DESVVIVGNDLTP-SDTAQLNKEFVQGFATNIGG-RTSASAIMSRSLEIPAIVGTKS-ITQEV--KQGDMIIVDGLNGDV 229 (572)
T ss_dssp SCCEEEEESCCCH-HHHTTCCTTTEEEEEESSCC-TTSHHHHHHHHTTCCEEECCSS-HHHHC--CTTCEEEEETTTTEE
T ss_pred CCCEEEEEcCCCH-HHHHhhChhceeEEEEcCCC-cccHHHHHHHHcCCCEEEechh-HHhhC--CCCCEEEEECCCCEE
Confidence 4578888874322 22221 48999997665 8999999999999997764332 33322 479999998777667
Q ss_pred EEeec
Q 001019 938 IISDI 942 (1188)
Q Consensus 938 ~l~~~ 942 (1188)
.+.+.
T Consensus 230 ~~~p~ 234 (572)
T 2wqd_A 230 IVNPT 234 (572)
T ss_dssp EESCC
T ss_pred EeCCc
Confidence 66654
No 18
>2hwg_A Phosphoenolpyruvate-protein phosphotransferase; enzyme I, phosphoenolpyruvate:sugar phosphotransferase system, PTS; HET: NEP; 2.70A {Escherichia coli} PDB: 2kx9_A 2xdf_A 2l5h_A
Probab=86.01 E-value=0.46 Score=57.66 Aligned_cols=76 Identities=17% Similarity=0.190 Sum_probs=52.6
Q ss_pred CCCeEEEEeCCCCcccCCC----CcEEEEcCCCCCcchhhhhhcccCCceEEEeechHHHHHHHhcCCCeEEEEEcCCce
Q 001019 862 RRPTIIIASRITGEEEIPV----GVVAVLTPDMPDVLSHVSIRARNNKVCFATCFDQNILRNLRLKEGKAVSIRLKSTNL 937 (1188)
Q Consensus 862 ~~P~Ill~~~~~GeEEIP~----gVaGVit~~~~d~LSHvaVRARn~gVp~atc~d~~~~~~l~~l~Gk~V~l~vss~~v 937 (1188)
.+|.|||++..+=+ +++. .+.||||..-. ..||.+|.||++|||-+.--.. ....+ .+|..|.+.-+.+.|
T Consensus 153 ~~~~ILVa~~l~Ps-~~~~l~~~~~~Givt~~Gg-~tSHaAIvAR~lgIPaVvG~~~-~~~~~--~~G~~v~vDg~~G~V 227 (575)
T 2hwg_A 153 QDEVILVAADLTPS-ETAQLNLKKVLGFITDAGG-RTSHTSIMARSLELPAIVGTGS-VTSQV--KNDDYLILDAVNNQV 227 (575)
T ss_dssp CSCEEEEESCCCHH-HHHTCCTTTEEEEEESSCC-TTSHHHHHHHHTTCCEEECCSC-HHHHC--CTTCEEEEETTTTEE
T ss_pred CCCEEEEEcCCCHH-HHHHhCccceeEEEEcCCC-cccHHHHHHHHCCCCEEEcchh-HHhhC--CCCCEEEEECCCCEE
Confidence 45789888743211 1221 48999997665 8999999999999997754332 33322 479999998777667
Q ss_pred EEeec
Q 001019 938 IISDI 942 (1188)
Q Consensus 938 ~l~~~ 942 (1188)
.+.+.
T Consensus 228 ~~~p~ 232 (575)
T 2hwg_A 228 YVNPT 232 (575)
T ss_dssp EESCC
T ss_pred EeCCc
Confidence 76654
No 19
>2laa_A Beta/alpha-amylase; SBD, CBM25, hydrolase; NMR {Paenibacillus polymyxa} PDB: 2lab_A
Probab=82.00 E-value=3.5 Score=39.40 Aligned_cols=72 Identities=14% Similarity=0.294 Sum_probs=50.1
Q ss_pred EEEEeecCCceEEEeeeeecCCCccccCCCCCCCccccccccccc-ccE-EEEEEecCCcceeEEEEEEecccccccccc
Q 001019 39 QFQLRNCARTWILHWGFLYRGNTNWFIPAEHPKQGALQTPFVKSG-EIY-LVTIELRDPKIHAIEFILKDGIHDRWLRLN 116 (1188)
Q Consensus 39 ~~~~~n~~~~l~lHWGv~~~~~~~W~~P~~~Pk~~A~~Tpf~~~g-~~~-~v~ie~~d~~i~ai~Fvl~de~~~~W~k~~ 116 (1188)
+|--+...++..|||| + +.+.|..+|..+ |.+++ +.. ..+|++.. -..|+|+++|.. +.|-.++
T Consensus 8 tiyY~~g~~~vylHyg--~-~~g~Wt~~~~v~--------M~~~~~~gw~~~TI~l~~--g~~~~~~F~dG~-~~WDNn~ 73 (104)
T 2laa_A 8 TIYYKKGFNSPYIHYR--P-AGGSWTAAPGVK--------MQDAEISGYAKITVDIGS--ASQLEAAFNDGN-NNWDSNN 73 (104)
T ss_dssp EEEEECSSSSCEEEEE--E-TTSCCCSSSCEE--------CEEETTTTEEEEEEECTT--CSCEEEEEECSS-SCEESTT
T ss_pred EEEEcCCCCcEEEEEc--C-CCCCCCcCCccc--------cccccCCCeEEEEEECCC--CCEEEEEEeCCC-CcCcCCC
Confidence 3333356788999999 3 337998877543 12222 223 36667653 479999999874 8999999
Q ss_pred CCcccccC
Q 001019 117 HGNFRIEI 124 (1188)
Q Consensus 117 g~nf~v~l 124 (1188)
|+||.++.
T Consensus 74 g~Nyt~~~ 81 (104)
T 2laa_A 74 TKNYSFST 81 (104)
T ss_dssp TSCEEECS
T ss_pred CccEEecC
Confidence 99999975
No 20
>2la2_A Cecropin, papiliocin; antimicrobial peptide, cecropin-like peptide, AN inflammatory activity, antimicrobial protein; NMR {Papilio xuthus}
Probab=24.14 E-value=20 Score=28.26 Aligned_cols=11 Identities=45% Similarity=0.866 Sum_probs=9.3
Q ss_pred CchhhHHHHHH
Q 001019 501 VGQRIRDEILV 511 (1188)
Q Consensus 501 ~Gq~iRd~IL~ 511 (1188)
+||+|||.|..
T Consensus 11 vGq~iRd~ii~ 21 (38)
T 2la2_A 11 VGRNVRDGIIK 21 (38)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 69999999863
No 21
>1ow5_A Serine/threonine-protein kinase STE11; MAP kinase, MAPKKK, SAM domain, pointed domain, SCM domain, STE50 regulator, transferase; NMR {Saccharomyces cerevisiae} SCOP: a.60.1.2 PDB: 1x9x_A
Probab=23.53 E-value=14 Score=34.27 Aligned_cols=57 Identities=19% Similarity=0.296 Sum_probs=40.3
Q ss_pred hHHHHHHHHHHHHcCCChhhHHHHHhhCCCCh-hhhhcCCCCCcCCCCccchhhhhhhHHHHHHHHHHHhh
Q 001019 538 DIIICEALLNYIRCGFKIDAYWQTLNCHGLSK-QKLASYDRPIVSEPRFRADAKESLTRDLTMYLKTLKAV 607 (1188)
Q Consensus 538 Dv~ICea~l~~l~s~~~~~~yw~~L~~~git~-erl~s~dr~I~~ep~~~~~~~~~l~~d~~~yl~~Lk~v 607 (1188)
|+..|..+|..|.+ ..|=...-+|||+- |.|...|..+.-|= =|.-..+=++|||++
T Consensus 14 ~~~~v~~wL~si~c----~qY~~~F~eN~I~g~d~L~eLd~e~LkEl---------GI~kvGdRirIlk~v 71 (85)
T 1ow5_A 14 DLPFVQLFLEEIGC----TQYLDSFIQCNLVTEEEIKYLDKDILIAL---------GVNKIGDRLKILRKS 71 (85)
T ss_dssp --CHHHHHHHHHSC----THHHHHHHHHTCCCHHHHHHCCHHHHHHH---------TCCCHHHHHHHHHHH
T ss_pred chHHHHHHHHHcCC----hhHHHHHHHcCCCcHHHHHHcCHHHHHHh---------CCCcccHHHHHHHHH
Confidence 34488888888855 57999999999999 99999886633221 134456678888765
Done!